isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
Isoform_100000_314	chr2	-	1147	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	16	3	16	-3	multi-exon	FALSE	canonical	3	3857	junction_2	289.314942238504	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGTCTCATTATTAAT	9520	False	NA	-5	True	AATAAA	-16	NA	10085305	10060843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
Isoform_100005_60	chr2	-	1054	9	FSM	ENSMUSG00000025781.15	ENSMUST00000026887.14	1060	9	-11	17	6	-3	multi-exon	TRUE	canonical	3	78	junction_1	1503.84357564209	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGTCTCATTATTAAT	9576	False	NA	-5	True	AATAAA	-16	NA	10085249	10060843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
Isoform_100013_22	chr2	-	4572	15	FSM	ENSMUSG00000026773.20	ENSMUST00000114846.9	4634	15	63	-1	-21	-1	multi-exon	FALSE	canonical	3	18	junction_2	9.41693004267163	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGACTCGCTTCTCA	6371	False	NA	-4	True	AATAAA	-18	NA	11506849	11476635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
Isoform_100014_9	chr2	-	4649	15	FSM	ENSMUSG00000026773.20	ENSMUST00000114846.9	4634	15	-10	-5	-10	3	multi-exon	FALSE	canonical	3	18	junction_2	9.41693004267163	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGACTCGCTTCTCAGGTT	6298	False	NA	0	True	AATAAA	-22	NA	11506922	11476631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
Isoform_100015_12	chr2	-	4482	15	FSM	ENSMUSG00000026773.20	ENSMUST00000192949.6	4801	15	-73	392	-73	-1	multi-exon	FALSE	canonical	3	18	junction_2	9.7969174660571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGACTCGCTTCTCA	NA	False	NA	-4	True	AATAAA	-18	NA	11558961	11476635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
Isoform_100027_1650	chr2	-	1533	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	58	8	58	-4	multi-exon	FALSE	canonical	3	1239	junction_6	93.4948621914506	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTCTCTGG	NA	False	NA	-32	True	TATAAA	-10	NA	11608015	11590255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
Isoform_100028_86	chr2	-	1592	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	-1	8	-1	-4	multi-exon	FALSE	canonical	3	1239	junction_6	93.4948621914506	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTCTCTGG	NA	False	NA	-32	True	TATAAA	-10	NA	11608074	11590255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
Isoform_100043_30	chr2	-	3617	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	6	0	intron_retention	FALSE	canonical	3	40	junction_19	66.9909695406776	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782387	11747383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782214
Isoform_100044_55	chr2	-	3559	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	1	-1	intron_retention	FALSE	canonical	3	40	junction_19	58.1895824009762	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782358	11747384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782242
Isoform_100047_166	chr2	-	3537	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-15	0	intron_retention	FALSE	canonical	3	88	junction_20	47.1269296687149	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782333	11747383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
Isoform_100048_94	chr2	-	3566	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	88	junction_20	47.1269296687149	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782362	11747383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
Isoform_100050_270	chr2	-	3537	21	FSM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	32	-2	0	0	multi-exon	FALSE	canonical	3	183	junction_20	31.6521721213569	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782361	11747383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
Isoform_100056_93	chr2	-	2058	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	29	257	0	112	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGTGGGAACTTCTAT	NA	False	NA	-2	True	AATAAA	-23	NA	12424252	12352330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
Isoform_100058_58	chr2	-	2282	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	61	1	1	-1	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCACTTTTACATTT	NA	False	NA	-23	True	AATAAA	-18	NA	12424220	12352074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
Isoform_100060_6	chr2	-	1455	8	NIC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	-8	105	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	51.1843407175855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTACTATGTGGGAA	NA	False	NA	-9	True	AATAAA	-16	NA	12424289	12352337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12423969
Isoform_100063_361	chr2	-	1481	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	110	-45	3	45	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTGTGCACATTTTTT	7153	False	NA	0	True	AATAAA	-15	NA	13276116	13081777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
Isoform_100066_16	chr2	-	1579	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	9	-42	9	42	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGGGTGTGCACATTT	7052	False	NA	-3	True	AATAAA	-12	NA	13276217	13081780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
Isoform_100067_16	chr2	-	1602	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	-14	-42	-14	42	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGGGTGTGCACATTT	7029	False	NA	-3	True	AATAAA	-12	NA	13276240	13081780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
Isoform_100070_6	chr2	-	1437	8	FSM	ENSMUSG00000026727.11	ENSMUST00000114791.9	1604	8	18	149	-4	42	multi-exon	FALSE	canonical	2	5	junction_6	120.515389820858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGGGTGTGCACATTT	7143	False	NA	-3	True	AATAAA	-12	NA	13276126	13081780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13275721_13275834_13276010
Isoform_100073_12	chr2	-	1672	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	13	2103	-5	-2103	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATAATGATCCTTAGA	9042	False	NA	NA	False	TATAAA	-12	NA	13549466	13515927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
Isoform_100074_3	chr2	-	2036	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	13	1739	-5	-1739	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTCTTGATGATTGATT	9042	False	NA	NA	False	NA	NA	NA	13549466	13515563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
Isoform_100078_59	chr2	-	3386	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	219	4013	219	2120	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGAGGCTCTTTTATG	NA	False	NA	NA	False	AATAAA	-25	NA	13798656	13659844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
Isoform_10008_15	chr10	-	1201	1	Antisense	novelGene_ENSMUSG00000034974.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	7181	False	NA	NA	False	NA	NA	NA	81026542	81025341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_81025300_81026500
Isoform_100081_13	chr2	-	3499	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	106	4013	106	2120	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGAGGCTCTTTTATG	NA	False	NA	NA	False	AATAAA	-25	NA	13798769	13659844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
Isoform_100085_3	chr2	-	5708	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	105	1805	105	-1805	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAATCTGTTATATCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	13798770	13657636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
Isoform_100086_5	chr2	-	7411	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	210	-3	210	3	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTTGTGAGTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	13798665	13655828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
Isoform_100087_13	chr2	-	885	6	FSM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	-14	0	2	0	multi-exon	FALSE	canonical	1	3	junction_3	43.3340512761039	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	False	NA	-2	True	AATAAA	-19	NA	14060845	14031641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_14031818_14040589_14040769_14049593_14049683_14049758_14049778_14049948_14050067_14060541
Isoform_100088_50	chr2	-	827	6	FSM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	37	7	37	-7	multi-exon	FALSE	canonical	1	3	junction_3	43.3340512761039	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGGATTGCATTGT	NA	False	NA	-9	True	AATAAA	-12	NA	14060794	14031648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_14031818_14040589_14040769_14049593_14049683_14049758_14049778_14049948_14050067_14060541
Isoform_10009_4	chr10	-	165	1	Intergenic	novelGene_731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGGGTTATTGA	8006	False	NA	NA	False	NA	NA	NA	12437277	12437112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_12437100_12437300
Isoform_100090_4	chr2	-	906	6	FSM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	14	-49	14	49	multi-exon	FALSE	canonical	1	3	junction_3	43.3340512761039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTCATATTGTGC	NA	False	NA	47	True	AATATA	-24	NA	14060817	14031592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_14031818_14040589_14040769_14049593_14049683_14049758_14049778_14049948_14050067_14060541
Isoform_100093_14	chr2	-	1740	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-8	1165	-8	0	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGGGGCTTTTTCTT	970	False	NA	0	True	AATGAA	-17	NA	15054099	15001106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
Isoform_100094_3	chr2	-	2902	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-5	0	-5	0	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTTTGAAAAATATCAT	973	False	NA	NA	False	NA	NA	NA	15054096	14999941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
Isoform_100095_3	chr2	-	7828	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-13	-4918	-13	4918	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTATTTGTTTCCG	965	False	NA	NA	False	NA	NA	NA	15054104	14995023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
Isoform_100097_3	chr2	-	3462	10	NIC	ENSMUSG00000026707.16	novel	1582	11	NA	NA	-13	0	intron_retention	FALSE	canonical	3	48	junction_2	8.45905169363301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGGGGCTTTTTCTT	965	False	NA	0	True	AATGAA	-17	NA	15054104	15001106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
Isoform_100098_3	chr2	-	2528	5	ISM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-29	41303	3	1	5prime_fragment	FALSE	canonical	3	61	junction_4	7.69334127671456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGCTTATATTTGATGA	949	False	NA	NA	False	AATAAA	-18	NA	15054120	15041244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
Isoform_100103_12	chr2	-	3450	2	NNC	ENSMUSG00000054057.3	novel	3217	2	NA	NA	47	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATAGCCTACTTTGC	NA	False	NA	-24	True	ATTAAA	-16	NA	18033635	18030004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_18033050_18033230
Isoform_100109_49	chr2	-	2546	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	20	2931	1	455	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGCTTTGGGCTTGTTC	NA	False	NA	-4	True	TTTAAA	-28	NA	18397621	18221490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
Isoform_10011_54	chr10	+	176	1	Intergenic	novelGene_1067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	81056728	81056904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81056700_81056900
Isoform_100110_15	chr2	-	5484	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	9	4	3	-4	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGTGTATGTATAA	NA	False	NA	NA	False	AATAAA	-17	NA	18397632	18218563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
Isoform_100114_3	chr2	-	1166	7	ISM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	38	80139	19	12750	5prime_fragment	FALSE	canonical	3	55	junction_5	4.48763733927875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAAGTTGAATTTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	18397603	18298698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
Isoform_100116_75	chr2	-	3618	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	-141	0	-141	0	multi-exon	FALSE	canonical	3	72	junction_7	14.3139403690559	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTTCTCTGTGCTGG	NA	False	NA	0	True	AATAAA	-21	NA	19003078	18847065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
Isoform_10012_33	chr10	+	175	1	Intergenic	novelGene_1068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACCTTTTAAATGT	5882	False	NA	NA	False	NA	NA	NA	81063407	81063582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81063400_81063600
Isoform_100123_6	chr2	-	3432	8	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-141	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	32.7008706118891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTTCTCTGTGCTGG	NA	False	NA	0	True	AATAAA	-21	NA	19003078	18847065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18893862_18894016_18911039_18911137_18912865_18912964_19002662
Isoform_100128_6	chr2	-	7437	25	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_24	20.8291662499166	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20973807	20852750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973290
Isoform_100130_32	chr2	-	7038	25	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_24	19.6061480578585	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20973412	20852750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
Isoform_100131_5	chr2	-	7431	25	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	-110	3	combination_of_known_junctions	FALSE	canonical	3	40	junction_24	19.6061480578585	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGTTGGGAGCTTACT	NA	False	NA	-18	True	AATAAA	-18	NA	20973802	20852747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
Isoform_100132_3	chr2	-	7316	25	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	35	6	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_24	24.4408299095318	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGGGAGCTTACTTGG	NA	False	NA	-15	True	AATAAA	-21	NA	20973260	20852744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20972870
Isoform_100133_7	chr2	-	7042	25	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_11	27.0262218348527	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20973409	20852750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973290
Isoform_100134_12	chr2	-	7038	25	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	31	4	combination_of_known_junctions	FALSE	canonical	2	15	junction_11	26.1419402812161	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTGGGAGCTTACTT	NA	False	NA	-17	True	AATAAA	-19	NA	20973405	20852746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
Isoform_100136_4	chr2	-	7255	25	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	2	15	junction_11	26.1419402812161	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCACTGTTGGGAGCT	NA	False	NA	-22	True	AATAAA	-14	NA	20973627	20852751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
Isoform_100137_3	chr2	-	5483	8	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	24	9044	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	20.9810410045034	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTAACTAAGAGTAGTC	NA	False	NA	NA	False	NA	NA	NA	20973412	20882124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973290
Isoform_100139_75	chr2	-	3040	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	67	296	11	0	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGGATATTGTTAA	NA	False	NA	-7	True	AATAAA	-16	NA	22930186	22830380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_10014_231	chr10	+	177	1	Intergenic	novelGene_1069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAGATCA	NA	False	NA	NA	False	NA	NA	NA	81117728	81117905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81117700_81117900
Isoform_100142_31	chr2	-	3087	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	21	295	-1	1	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTGGATATTGTTAAA	NA	False	NA	-6	True	AATAAA	-17	NA	22930232	22830379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_100147_13	chr2	-	3382	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	13	8	2	5	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGAAATTATTTCTTAAA	NA	False	NA	-17	True	AATAAA	-17	NA	22930240	22830092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_100150_15	chr2	-	2243	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	-42	1159	4	1	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTTTGGCCTCTCCTT	NA	False	NA	-4	True	TATAAA	-32	NA	22930249	22831243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_100153_75	chr2	-	3047	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	18	295	8	1	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTGGATATTGTTAAA	NA	False	NA	-6	True	AATAAA	-17	NA	22930189	22830379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_100154_24	chr2	-	3082	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	-20	298	4	-2	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTTGGATATTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	22930227	22830382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_100157_26	chr2	-	3337	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	21	2	11	-2	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTTCTTAAAATGATT	NA	False	NA	-11	True	AATAAA	-23	NA	22930186	22830086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_100159_7	chr2	-	3388	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	-33	5	2	-5	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTATTTCTTAAAATG	NA	False	NA	-14	True	AATAAA	-20	NA	22930240	22830089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_100164_8	chr2	-	2953	9	FSM	ENSMUSG00000058835.15	ENSMUST00000149719.8	3303	9	67	283	11	0	multi-exon	FALSE	canonical	3	21	junction_2	106.193220122567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGGATATTGTTAA	NA	False	NA	-7	True	AATAAA	-16	NA	22930186	22830380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_22832060_22836587_22836774_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_100176_53	chr2	-	4533	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	117	940	-10	-940	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGCAGCAGTGTTGTT	NA	False	NA	NA	False	AAAAAG	-31	NA	23045919	23006557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_100180_20	chr2	-	6616	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	131	-1157	4	1157	multi-exon	TRUE	canonical	3	112	junction_2	17.5310821963508	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACCATAGCTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	23045905	23004460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_100183_10	chr2	-	6652	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	95	-1157	-32	1157	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACCATAGCTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	23045941	23004460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_100187_3	chr2	-	3089	13	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-13	-2535	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	52.4141493831156	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAGGGAGTGAGCCGTA	NA	False	NA	-25	True	AATAAA	-20	NA	23045922	23008152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23038196_23038345_23040999_23041138_23045690
Isoform_100188_8	chr2	-	1252	7	FSM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	-48	-3	-48	3	multi-exon	FALSE	canonical	3	131	junction_4	13.2759180473518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGTGATACTGGTCT	NA	False	NA	NA	False	TATAAA	-19	NA	23045957	23026692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_100189_4	chr2	-	1183	4	ISM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	-10	8093	-10	-8093	5prime_fragment	FALSE	canonical	3	131	junction_1	17.2497987105808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGAGAGAGAGA	NA	False	NA	NA	False	CATAAA	-15	NA	23045919	23034788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_100192_8	chr2	-	2836	12	FSM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-106	-1214	-6	616	multi-exon	FALSE	canonical	3	30	junction_7	7.08391263228297	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATTAGTTGATCACT	NA	False	NA	NA	False	AATAAA	-13	NA	23462096	23400067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
Isoform_100194_16	chr2	-	2742	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	20	3833	-6	619	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTTGATCACTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	23462096	23400064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
Isoform_100196_11	chr2	-	6572	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	27	-4	1	4	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGCTTGGATTTATT	NA	False	NA	2	True	AATAAA	-26	NA	23462089	23396227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
Isoform_100197_5	chr2	-	1081	7	ISM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-103	26162	-3	5811	5prime_fragment	FALSE	canonical	3	30	junction_2	7.19760762722973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGTAAATCTGAGCAT	NA	False	NA	NA	False	AATAAA	-6	NA	23462093	23427443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
Isoform_100198_6	chr2	-	1124	3	ISM	ENSMUSG00000004113.19	ENSMUST00000100348.10	7182	47	154954	-1	-559	1	3prime_fragment	FALSE	canonical	2	6	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTCTCTCTATCCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	24498105	24496385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_24497113_24497453_24497699_24497953
Isoform_100199_4	chr2	-	1316	4	ISM	ENSMUSG00000004113.19	ENSMUST00000100348.10	7182	47	153079	-14	-2434	14	3prime_fragment	FALSE	canonical	1	1	junction_3	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCCTGTGTACTGCCTT	NA	False	NA	NA	False	AATAAA	-31	NA	24499980	24496372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_24497113_24497453_24497699_24497953_24498159_24499854
Isoform_100208_8	chr2	-	5052	27	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	1	12	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	64.4824181348739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTAAATGGAGTTTTC	9618	False	NA	-13	True	AATAAA	-7	NA	24809598	24680794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753918_24767466_24767639_24774157_24774715_24777008_24777082_24809565
Isoform_100210_10	chr2	-	5096	27	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-25	12	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	60.9931124252043	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTAAATGGAGTTTTC	9565	False	NA	-13	True	AATAAA	-7	NA	24809651	24680794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753918_24767466_24767639_24774157_24774715_24777014_24777079_24809565
Isoform_100212_28	chr2	-	5081	27	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	1	20	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	52.763749995707	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGTTTTCATTATGAC	9591	False	NA	-5	True	AATAAA	-15	NA	24809625	24680786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753918_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_100215_21	chr2	-	5089	27	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	1	26	combination_of_known_junctions	FALSE	canonical	3	45	junction_25	50.78478782624	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCATTATGACACATTC	9598	False	NA	1	True	AATAAA	-21	NA	24809618	24680780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777008_24777082_24809565
Isoform_100218_81	chr2	-	5073	27	FSM	ENSMUSG00000036893.18	ENSMUST00000091348.11	4615	27	-18	-440	2	20	multi-exon	FALSE	canonical	3	73	junction_26	45.6963867643122	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGTTTTCATTATGAC	9599	False	NA	-5	True	AATAAA	-15	NA	24809617	24680786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
Isoform_100223_191	chr2	-	5077	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-15	-382	1	20	multi-exon	FALSE	canonical	3	154	junction_23	33.3131324390158	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGTTTTCATTATGAC	9598	False	NA	-5	True	AATAAA	-15	NA	24809618	24680786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_100225_12	chr2	-	5112	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-47	-385	-24	23	multi-exon	FALSE	canonical	3	154	junction_23	33.3131324390158	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTTTCATTATGACACA	9566	False	NA	-2	True	AATAAA	-18	NA	24809650	24680783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_100226_10	chr2	-	5911	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-6	-1225	1	-4	multi-exon	TRUE	canonical	3	154	junction_23	33.3131324390158	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTTCATTGTCTT	9607	False	NA	NA	False	AATAAA	-13	NA	24809609	24679943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_100228_6	chr2	-	4533	26	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	0	25	combination_of_known_splicesites	FALSE	canonical	3	9	junction_24	57.3508500372924	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCATTATGACACATT	9590	False	NA	0	True	AATAAA	-20	NA	24809626	24680781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24777014_24777082_24809565
Isoform_10023_3	chr10	+	187	1	Intergenic	novelGene_1070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGTTAAAATGTAAA	5884	False	NA	NA	False	NA	NA	NA	81189849	81190036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81189800_81190000
Isoform_100230_14	chr2	-	5072	27	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	2	18	combination_of_known_junctions	FALSE	canonical	3	34	junction_23	58.7975666686458	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAGTTTTCATTATG	9619	False	NA	-7	True	AATAAA	-13	NA	24809597	24680788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777079_24809565
Isoform_100232_42	chr2	-	5094	27	FSM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	4	855	-3	12	multi-exon	FALSE	canonical	3	34	junction_23	50.1601134592868	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTAAATGGAGTTTTC	9594	False	NA	-13	True	AATAAA	-7	NA	24809622	24680794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_100234_8	chr2	-	4930	26	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	1	20	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	65.0794714176444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGTTTTCATTATGAC	9598	False	NA	-5	True	AATAAA	-15	NA	24809618	24680786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
Isoform_100235_14	chr2	-	4925	26	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	0	20	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	57.3307038156693	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGTTTTCATTATGAC	9606	False	NA	-5	True	AATAAA	-15	NA	24809610	24680786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_100241_61	chr2	-	1614	8	FSM	ENSMUSG00000026972.16	ENSMUST00000028349.14	1666	8	52	0	-12	0	multi-exon	FALSE	canonical	3	62	junction_2	7.55658923167897	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9369	False	NA	-31	True	AATAAA	-17	NA	24825212	24815363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
Isoform_100242_8	chr2	-	1522	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	24.8445164976097	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9350	False	NA	-31	True	AATAAA	-17	NA	24825231	24815363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24825039
Isoform_100243_15	chr2	-	1695	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-18	1	intron_retention	FALSE	canonical	3	75	junction_2	4.41273409829124	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGCGAGTGGCTGGC	9363	False	NA	-33	True	AATAAA	-15	NA	24825218	24815365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24815689_24815767_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
Isoform_100245_3	chr2	-	1627	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	30.4940795711051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9395	False	NA	-31	True	AATAAA	-17	NA	24825186	24815363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24815689_24815767_24816461_24816594_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
Isoform_100246_4	chr2	-	2340	5	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	76	junction_4	3.96074487943871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9368	False	NA	-31	True	AATAAA	-17	NA	24825213	24815363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24815689_24815767_24816740_24816889_24817045_24817137_24817852_24825039
Isoform_100248_182	chr2	-	718	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	56	2	-53	-2	multi-exon	FALSE	canonical	3	317	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATGTGTTTTGAATCAA	NA	False	NA	-5	True	ATTAAA	-19	NA	24865054	24864130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_24864694_24864899
Isoform_100249_44	chr2	-	2987	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	268	0	141	0	multi-exon	FALSE	canonical	3	13	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCACCTTCTTTTCTT	8530	False	NA	NA	False	AATAAA	-17	NA	25086630	25082977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25085938_25086603
Isoform_100250_35	chr2	-	3234	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	269	-248	142	248	multi-exon	FALSE	canonical	3	13	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	8531	False	NA	NA	False	NA	NA	NA	25086629	25082729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25085938_25086603
Isoform_100251_3	chr2	-	3434	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	68	-247	-47	247	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8330	False	NA	NA	False	NA	NA	NA	25086830	25082730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25085938_25086603
Isoform_100252_4	chr2	-	3282	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	-31	4	-31	-4	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCCACCCACCTTCTTT	8231	False	NA	NA	False	AATAAA	-13	NA	25086929	25082981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25085938_25086603
Isoform_100253_6	chr2	-	3327	2	NNC	ENSMUSG00000059555.7	novel	3255	2	NA	NA	157	246	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8546	False	NA	NA	False	NA	NA	NA	25086614	25082731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_25085938_25086493
Isoform_100259_1562	chr2	-	2554	13	FSM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	75	8	-33	-4	multi-exon	TRUE	canonical	3	539	junction_7	54.5501807716732	1562	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCCATGGTGAGGAATC	NA	False	NA	NA	False	AATAAA	-12	NA	25101426	25089731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
Isoform_100271_241	chr2	-	1455	3	ISM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	442	2	394	-2	3prime_fragment	FALSE	canonical	3	1343	junction_2	31.5	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	-26	True	ATTAAA	-16	NA	25114272	25112173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_25113381_25113945_25114057_25114135
Isoform_100274_5177	chr2	-	1549	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	47	2	-1	-2	multi-exon	FALSE	canonical	3	1343	junction_2	25.8499946271217	5177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	-26	True	ATTAAA	-16	NA	25114667	25112173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
Isoform_100282_173	chr2	-	2309	14	FSM	ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	27	0	1	0	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145394	25137240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
Isoform_100283_40	chr2	-	4725	14	FSM	ENSMUSG00000006471.19_ENSMUSG00000115018.3	ENSMUST00000114349.9	2336	14	27	-2416	1	6	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCATCCTCATTATT	NA	False	NA	NA	False	AATAAA	-25	NA	25145394	25134824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
Isoform_100284_18	chr2	-	2392	14	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-5	6	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	48.1394670101744	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTCACTTCTCTTTTAT	NA	False	NA	0	True	CATAAA	-22	NA	25145385	25137234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25145040_25145228
Isoform_100286_6	chr2	-	2475	12	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	170	junction_6	15.3821835331637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145398	25137240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25137867_25137971_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
Isoform_100287_9	chr2	-	2617	11	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	170	junction_5	16.1124175715502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145394	25137240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25137867_25137971_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
Isoform_100288_4	chr2	-	5033	11	Fusion	ENSMUSG00000006471.19_ENSMUSG00000115018.3	novel	2362	12	NA	NA	0	2	intron_retention	FALSE	canonical	3	170	junction_5	16.1124175715502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTCTGCCATCCTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	25145398	25134828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_-_25137867_25137971_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
Isoform_100289_44	chr2	-	1023	2	FSM	ENSMUSG00000026966.7	ENSMUST00000141470.2	1006	2	27	-44	-1	-3	multi-exon	FALSE	canonical	3	843	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGTCTGCTAGCTA	NA	False	NA	-9	True	AATAAA	-13	NA	25162423	25161053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25161594_25161940
Isoform_100290_58	chr2	-	979	2	FSM	ENSMUSG00000026966.7	ENSMUST00000141470.2	1006	2	74	-47	40	0	multi-exon	FALSE	canonical	3	843	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162376	25161050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25161594_25161940
Isoform_100293_722	chr2	-	839	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	23	0	11	0	multi-exon	FALSE	canonical	3	707	junction_2	68	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162405	25161050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25161594_25161940_25162141_25162309
Isoform_100296_34	chr2	-	847	3	FSM	ENSMUSG00000026966.7	ENSMUST00000133697.2	845	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	46	junction_2	398.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162424	25161050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25161594_25161940_25162141_25162320
Isoform_100298_9	chr2	-	3246	18	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7585	0	-6113	0	3prime_fragment	FALSE	canonical	0	0	junction_1	7.78428903043448	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	9879	False	NA	-4	True	NA	NA	NA	25201522	25181192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_25182141_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_100299_20	chr2	-	3140	17	ISM	ENSMUSG00000026959.14	ENSMUST00000114317.10	3809	20	7584	-4	-6114	4	3prime_fragment	FALSE	canonical	3	13	junction_1	5.11699069278028	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTTTGTCTATTGTTGA	9878	False	NA	0	True	NA	NA	NA	25201523	25181188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_25182141_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_10030_10	chr10	+	180	1	Intergenic	novelGene_732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAGTAAACA	NA	False	NA	NA	False	NA	NA	NA	12554809	12554989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_12554800_12555000
Isoform_100301_25	chr2	-	3594	18	ISM	ENSMUSG00000026959.14	ENSMUST00000114310.10	4276	21	7588	5	-6110	-5	3prime_fragment	FALSE	canonical	2	8	junction_2	6.39852924277042	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATTTCCGGGTTTTGTC	9882	False	NA	-9	True	NA	NA	NA	25201519	25181197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_25182497_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_100304_6	chr2	-	2640	16	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7584	4159	-6114	-3282	internal_fragment	FALSE	canonical	3	19	junction_2	4.55289895439037	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGTGTGGATTTGTGGT	9878	False	NA	NA	False	NA	NA	NA	25201523	25185351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_100305_4	chr2	-	1832	6	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7586	11507	-6112	793	internal_fragment	FALSE	canonical	3	22	junction_5	4.58693797647189	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	9880	False	NA	NA	False	NA	NA	NA	25201521	25192699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_100306_5	chr2	-	3947	2	FSM	ENSMUSG00000026958.14	ENSMUST00000149953.2	466	2	-3483	2	2	-2	multi-exon	FALSE	canonical	3	339	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9003	False	NA	-19	True	AATAAA	-15	NA	25246369	25242303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25242579_25242697
Isoform_100308_8	chr2	-	1653	13	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	79.0721804569864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTCTAGTAGGATCCAT	9033	False	NA	-18	True	AATAAA	-16	NA	25246339	25242302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245821_25245966_25246040_25246155_25246242
Isoform_100309_8	chr2	-	1760	12	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	8	2	2	-2	intron_retention	FALSE	canonical	3	250	junction_10	27.0884684684635	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9009	False	NA	-19	True	AATAAA	-15	NA	25246363	25242303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040
Isoform_100310_311	chr2	-	1672	13	FSM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	8	2	2	-2	multi-exon	FALSE	canonical	3	250	junction_10	27.0014145719977	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9009	False	NA	-19	True	AATAAA	-15	NA	25246363	25242303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
Isoform_100311_7	chr2	-	2164	12	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	250	junction_9	27.0732095933591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9025	False	NA	-17	True	AATAAA	-17	NA	25246347	25242301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
Isoform_100312_5	chr2	-	1537	12	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	73.3482579353372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9025	False	NA	-19	True	AATAAA	-15	NA	25246347	25242303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
Isoform_100319_5	chr2	-	3441	4	NIC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	281	junction_3	23.8467328300266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9007	False	NA	-19	True	AATAAA	-15	NA	25246365	25242303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25242579_25242697_25242769_25243164_25244647_25244752
Isoform_10032_3	chr10	-	5110	1	NIC	ENSMUSG00000055053.19	novel	6237	9	NA	NA	-746	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTCTTGGTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	81237134	81232024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81232000_81237100
Isoform_100322_5	chr2	-	3818	3	NIC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	281	junction_2	29	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGTCTAGTAGGATCC	9025	False	NA	-20	True	AATAAA	-14	NA	25246347	25242304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25242579_25242697_25244647_25244752
Isoform_100324_19	chr2	-	1699	9	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	144.070241115228	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTCTGATTGTCTGT	NA	False	NA	-22	True	NA	NA	NA	25255638	25251507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25251752_25252082_25252150_25252661_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_100329_1056	chr2	-	1686	9	FSM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	56	1607	-11	-2	multi-exon	FALSE	canonical	3	362	junction_3	36.5288841192829	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTCTGATTGTCTGT	NA	False	NA	-22	True	NA	NA	NA	25255638	25251507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_100330_226	chr2	-	1719	9	FSM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	25	1605	25	0	multi-exon	FALSE	canonical	3	362	junction_3	36.5288841192829	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTCTGATTGTCTGTCT	NA	False	NA	-20	True	NA	NA	NA	25255669	25251505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_100334_28	chr2	-	1617	9	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	144.900342908497	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCTGATTGTCTG	NA	False	NA	-23	True	NA	NA	NA	25255638	25251508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25251752_25252082_25252150_25252674_25252861_25253323_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_100338_19	chr2	-	2085	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	414	junction_3	22.9889059313045	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTCTGATTGTCTGTC	NA	False	NA	-21	True	NA	NA	NA	25255641	25251506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25251752_25252082_25252150_25252674_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_100348_9	chr2	-	879	6	FSM	ENSMUSG00000047617.12	ENSMUST00000125710.8	917	6	87	-49	6	0	multi-exon	FALSE	canonical	3	10	junction_3	2.82842712474619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTTGTGAAGATTGGC	5409	False	NA	-4	True	AATAAA	-32	NA	25350933	25349493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25349714_25349786_25349872_25350020_25350087_25350178_25350370_25350456_25350507_25350666
Isoform_100349_3	chr2	-	838	7	FSM	ENSMUSG00000047617.12	ENSMUST00000114261.9	981	7	142	1	0	-1	multi-exon	FALSE	canonical	3	6	junction_6	3.94405318873308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGTTGTGAAGATTGG	5378	False	NA	-5	True	AATAAA	-31	NA	25350964	25349494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25349714_25349786_25349872_25350020_25350087_25350178_25350370_25350456_25350507_25350666_25350728_25350798
Isoform_10035_5	chr10	+	176	1	Intergenic	novelGene_1071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATAAGAAAATACA	7909	False	NA	NA	False	NA	NA	NA	81241078	81241254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81241100_81241300
Isoform_100350_3	chr2	-	921	7	FSM	ENSMUSG00000047617.12	ENSMUST00000114261.9	981	7	60	0	-3	0	multi-exon	FALSE	canonical	3	6	junction_6	3.94405318873308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTTGTGAAGATTGGC	5296	False	NA	-4	True	AATAAA	-32	NA	25351046	25349493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25349714_25349786_25349872_25350020_25350087_25350178_25350370_25350456_25350507_25350666_25350728_25350798
Isoform_100351_20	chr2	-	1217	7	FSM	ENSMUSG00000015083.12	ENSMUST00000040042.11	1150	7	-67	0	-67	0	multi-exon	FALSE	canonical	3	9	junction_1	2.38047614284762	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTCGTTTTTTGTC	NA	False	NA	-1	True	ATTAAA	-19	NA	25390692	25388662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25388836_25388916_25388956_25389025_25389128_25389409_25389518_25389600_25389672_25389850_25389988_25390105
Isoform_100354_31	chr2	-	2128	11	FSM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	23	0	23	0	multi-exon	FALSE	canonical	3	14	junction_9	38.6141165896619	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25436899	25408877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428856_25429097_25436873
Isoform_100355_150	chr2	-	2082	10	ISM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	7855	884	55	0	3prime_fragment	FALSE	canonical	3	106	junction_2	15.0562730456342	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25429097	25408877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877
Isoform_100356_149	chr2	-	2108	11	FSM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	52	884	22	0	multi-exon	FALSE	canonical	3	80	junction_10	20.6164982477626	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25436900	25408877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877_25429097_25436873
Isoform_100357_4	chr2	-	2246	11	FSM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	-79	877	-79	7	multi-exon	FALSE	canonical	3	80	junction_10	20.6164982477626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTTCATCTGGCTCC	NA	False	NA	-11	True	ATTAAA	-20	NA	25437031	25408870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877_25429097_25436873
Isoform_100358_4	chr2	-	1930	9	NIC	ENSMUSG00000026942.14	novel	3044	11	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	45.2050882091828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25436900	25408877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25428877_25429097_25436873
Isoform_10036_23	chr10	+	176	1	Intergenic	novelGene_1072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGGTATTTTCCTCAT	6224	False	NA	NA	False	NA	NA	NA	81274462	81274638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81274500_81274600
Isoform_100360_173	chr2	-	604	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	332	1	-14	-1	multi-exon	FALSE	canonical	3	774	junction_2	2.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTGACTTGTGTCTTG	5532	False	NA	-9	True	ATTAAA	-19	NA	25464904	25463442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25463712_25464199_25464325_25464694
Isoform_100361_5	chr2	-	755	3	FSM	ENSMUSG00000036504.7	ENSMUST00000147096.2	656	3	-27	-72	-27	0	multi-exon	FALSE	canonical	3	48	junction_2	365.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	5519	False	NA	-8	True	ATTAAA	-20	NA	25464917	25463441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25463712_25464199_25464462_25464694
Isoform_100375_884	chr2	-	3173	15	FSM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	57	0	1	0	multi-exon	FALSE	canonical	3	258	junction_7	28.5093074669466	884	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	3275	False	NA	-6	True	CATAAA	-15	NA	25498476	25473029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
Isoform_10039_6	chr10	-	1911	1	FSM	ENSMUSG00000044199.7	ENSMUST00000053646.7	2386	1	475	0	475	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCGTTTCTCAGTGTAT	7838	False	NA	NA	False	ATTAAA	-17	NA	81335491	81333580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81333600_81335500
Isoform_100390_13	chr2	-	782	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	-17	30	-17	7	multi-exon	FALSE	canonical	3	29	junction_4	9.85837207656518	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCTGAAGCAATTAAACAC	NA	False	NA	1	True	AATAAA	-25	NA	25512034	25510108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
Isoform_100391_4	chr2	-	840	5	NNC	ENSMUSG00000026939.13	novel	795	5	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	17.3403431338598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTGAGCTCTGAAGC	NA	False	NA	-9	True	AATAAA	-15	NA	25512021	25510118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511768_25511945
Isoform_100393_7	chr2	-	6571	17	FSM	ENSMUSG00000026933.18	ENSMUST00000114167.9	7981	17	4	1406	4	287	multi-exon	FALSE	canonical	3	23	junction_4	28.655006107136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTGGTTGTCACA	NA	False	NA	-2	True	AATAAA	-24	NA	25873290	25818255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825574_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
Isoform_100397_14	chr2	-	5736	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	3	-552	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTTACATATGTGGAGTG	NA	False	NA	-2	True	ACTAAA	-39	NA	25873291	25819094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
Isoform_10040_37	chr10	+	170	1	Intergenic	novelGene_1073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTTTTTTAAAAAATAGA	1879	False	NA	NA	False	NA	NA	NA	81342737	81342907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81342700_81342900
Isoform_100400_5	chr2	-	5901	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	16	-374	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCACCCTTGGCTGCCG	NA	False	NA	NA	False	GATAAA	-25	NA	25873278	25818916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
Isoform_100402_4	chr2	-	7869	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	-13	-128	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCAGGGTCTTCCTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	25873307	25816977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
Isoform_100403_6	chr2	-	6430	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	4	285	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	30.5170262130649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGTGTGTGGTTGTCA	NA	False	NA	-4	True	AATAAA	-22	NA	25873290	25818257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
Isoform_100408_2018	chr2	-	1842	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	8	2	8	-2	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	2018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTGTGTTACTTCATG	NA	False	NA	-5	True	AATAAA	-18	NA	25911751	25888556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
Isoform_100409_45	chr2	-	2065	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	8	-221	8	221	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCATGGCTACTTCTTC	NA	False	NA	NA	False	NA	NA	NA	25911751	25888333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
Isoform_10041_7	chr10	+	189	1	Intergenic	novelGene_1074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	81352528	81352717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81352500_81352700
Isoform_100416_170	chr2	-	1697	9	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	240.477617201685	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTTTACTTGTGTTAC	NA	False	NA	-11	True	AATAAA	-12	NA	25911751	25888562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25889080_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
Isoform_100426_6	chr2	-	2821	7	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	-1	2087	intron_retention	FALSE	canonical	2	11	junction_5	12.0611866009204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGAGACTAGTGTCCCTG	8933	False	NA	NA	False	NA	NA	NA	26012796	25948988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980173_25980253_25980495_26012700
Isoform_100427_16	chr2	-	2132	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	-16	4262	-16	1267	multi-exon	FALSE	canonical	3	39	junction_4	3.79473319220206	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTCATTATACTGTAAA	8883	False	NA	NA	False	TTTAAA	-19	NA	26012846	25949808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
Isoform_100433_154	chr2	-	2477	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	6	0	6	0	multi-exon	FALSE	canonical	3	70	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	False	NA	-6	True	ATTAAA	-19	NA	26030527	26026825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26028926_26030150
Isoform_100434_36	chr2	-	2508	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	-25	0	-25	0	multi-exon	FALSE	canonical	3	70	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	False	NA	-6	True	ATTAAA	-19	NA	26030558	26026825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26028926_26030150
Isoform_100435_47	chr2	-	2390	13	FSM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	164	5	164	-5	multi-exon	FALSE	canonical	3	18	junction_1	31.8210054663408	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTGTTTCAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	26127373	26099141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26099806_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
Isoform_100439_256	chr2	-	3869	12	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	164	-6	intron_retention	FALSE	canonical	3	117	junction_2	7.1269480445526	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGTTGTTTCAGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	26127373	26099142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
Isoform_100442_50	chr2	-	3895	12	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	139	-5	intron_retention	FALSE	canonical	3	117	junction_2	7.1269480445526	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTGTTTCAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	26127398	26099141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
Isoform_100448_45	chr2	-	2933	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	21	-38	11	38	multi-exon	FALSE	canonical	3	313	junction_2	24.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTAGTATCTGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	26242101	26238094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26240571_26241346_26241487_26241784
Isoform_100449_94	chr2	-	725	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	21	2170	11	-2170	multi-exon	FALSE	canonical	3	313	junction_2	24.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGCCTGGGCTCCTGTTT	NA	False	NA	-19	True	AGTAAA	-20	NA	26242101	26240302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26240571_26241346_26241487_26241784
Isoform_10045_4	chr10	+	171	1	Intergenic	novelGene_1075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAAAGCTGCTGAG	129	False	NA	NA	False	NA	NA	NA	81393179	81393350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81393200_81393400
Isoform_100452_24	chr2	-	725	3	NNC	ENSMUSG00000075467.5	novel	2916	3	NA	NA	11	-2174	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	135.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACCGGGCCTGGGCTCCT	NA	False	NA	-23	True	AGTAAA	-16	NA	26242101	26240306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_26240571_26241346_26241491_26241784
Isoform_100453_12	chr2	-	2912	3	NNC	ENSMUSG00000075467.5	novel	2916	3	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	135.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGGGCGGCCACCATGTC	NA	False	NA	NA	False	AATAAA	-21	NA	26242111	26238129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_26240571_26241346_26241491_26241784
Isoform_100455_36	chr2	-	577	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	19	2170	19	-2170	multi-exon	FALSE	canonical	3	60	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGCCTGGGCTCCTGTTT	NA	False	NA	-19	True	AGTAAA	-20	NA	26242093	26240302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26240571_26241784
Isoform_100456_11	chr2	-	2754	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	11	1	11	-1	multi-exon	FALSE	canonical	3	60	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGCGGGGCGGCCACCA	NA	False	NA	NA	False	AATAAA	-17	NA	26242101	26238133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26240571_26241784
Isoform_100457_6	chr2	-	1497	2	NIC	ENSMUSG00000075467.5	novel	2916	3	NA	NA	20	-2165	intron_retention	FALSE	canonical	3	313	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTCCTGTTTTTCTC	NA	False	NA	-14	True	AGTAAA	-25	NA	26242092	26240297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26241487_26241784
Isoform_100459_18	chr2	-	1117	9	ISM	ENSMUSG00000026928.15	ENSMUST00000100303.10	1947	12	2095	11	2095	0	3prime_fragment	FALSE	canonical	3	13	junction_2	6.02987354759617	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTGGTTGGATATGCA	NA	False	NA	NA	False	AATAAA	-17	NA	26247664	26242198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_26242424_26242496_26242574_26242952_26243027_26244368_26244418_26244841_26244884_26245344_26245537_26246769_26246896_26247196_26247341_26247476
Isoform_100460_4	chr2	-	1023	8	NIC	ENSMUSG00000026928.15	novel	1880	13	NA	NA	2115	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	9.74574737189174	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTGGTTGGATATGCA	NA	False	NA	NA	False	AATAAA	-17	NA	26247644	26242198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26242424_26242496_26242574_26244368_26244418_26244841_26244884_26245344_26245537_26246769_26246896_26247196_26247341_26247476
Isoform_100462_57	chr2	-	4336	23	FSM	ENSMUSG00000036281.14	ENSMUST00000035427.11	4363	23	28	-1	1	1	multi-exon	FALSE	canonical	3	40	junction_10	11.6217948571845	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATGTATAGCCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	26270637	26252784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
Isoform_100463_16	chr2	-	4345	23	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_22	13.922824473587	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATGTATAGCCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	26270650	26252784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
Isoform_100464_4	chr2	-	4318	23	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	14.8107203746654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270639	26252776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
Isoform_100465_22	chr2	-	4363	23	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	13.1962303658192	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATGTATAGCCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	26270640	26252784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
Isoform_100466_7	chr2	-	4357	23	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_22	15.1671812948139	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATGTATAGCCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	26270638	26252784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
Isoform_100468_60	chr2	-	2268	9	ISM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	8	0	-2	0	intron_retention	FALSE	canonical	3	96	junction_8	85.196739227508	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279320	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927
Isoform_100470_121	chr2	-	2165	10	FSM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	28	0	3	0	multi-exon	FALSE	canonical	3	51	junction_9	111.566621850404	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279300	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
Isoform_100471_353	chr2	-	2042	9	FSM	ENSMUSG00000026927.18	ENSMUST00000028293.12	2031	9	-11	0	1	0	multi-exon	FALSE	canonical	3	146	junction_8	70.8147892392543	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279327	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
Isoform_100473_38	chr2	-	2527	8	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_7	113.093784451811	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279318	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278597
Isoform_100474_16	chr2	-	2424	9	NIC	ENSMUSG00000026927.18	novel	2099	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	27	junction_7	132.397070870167	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279298	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278597_26279078_26279160
Isoform_100477_235	chr2	-	1960	8	FSM	ENSMUSG00000026927.18	ENSMUST00000077983.13	1955	8	-5	0	2	0	multi-exon	FALSE	canonical	3	120	junction_7	82.5556089640708	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279314	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26279160
Isoform_100478_23	chr2	-	2204	7	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	120	junction_6	87.5817078821574	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279314	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277684_26279160
Isoform_100479_11	chr2	-	2853	8	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	146	junction_7	75.6811248136629	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279299	26272814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26277324_26277567_26277684_26278503_26278573_26279160
Isoform_100485_11	chr2	-	3184	6	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_5	97.638107314716	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279318	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26279160
Isoform_100486_12	chr2	-	3434	5	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	120	junction_4	107.185295166828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279324	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277684_26279160
Isoform_100497_15	chr2	-	3524	5	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	120	junction_4	109.161291216255	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279306	26272813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26279160
Isoform_100505_54	chr2	-	3310	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	30	807	14	-2	multi-exon	FALSE	canonical	3	30	junction_1	7.99228022593531	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTTCTGGCCAAAGAG	1016	False	NA	1	True	AATAAA	-21	NA	26299182	26287067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
Isoform_100506_24	chr2	-	3877	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	12	258	-4	9	multi-exon	FALSE	canonical	3	30	junction_1	7.99228022593531	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCAGTTTGGTGCTTC	998	False	NA	NA	False	NA	NA	NA	26299200	26286518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
Isoform_100510_6	chr2	-	3150	11	NIC	ENSMUSG00000026925.17	novel	2790	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	12.6826653350153	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTTCTGGCCAAAGA	983	False	NA	0	True	AATAAA	-20	NA	26299215	26287068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778_26298822_26299013
Isoform_100513_66	chr2	-	8801	31	FSM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	-5	1	-3	-1	multi-exon	FALSE	canonical	3	86	junction_3	26.343373613365	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATGGCTTCCTTTGTGT	NA	False	NA	-1	True	AATAAA	-26	NA	26335231	26299443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
Isoform_100515_45	chr2	-	8715	30	FSM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	19	3	3	-3	multi-exon	FALSE	canonical	3	97	junction_2	23.0104665219992	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTTATGGCTTCCTTT	NA	False	NA	-5	True	AATAAA	-22	NA	26335209	26299447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
Isoform_100519_18	chr2	-	6053	3	ISM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	27	24362	13	2189	5prime_fragment	FALSE	canonical	3	167	junction_2	25	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26335199	26323804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_26326061_26328398_26332083_26335086
Isoform_100523_9	chr2	-	9490	34	FSM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	-6	4	-4	-4	multi-exon	TRUE	canonical	3	26	junction_31	9.72382644510991	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTGGAGTGTGGTTTG	NA	False	NA	-4	True	AATAAA	-30	NA	26393840	26347918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
Isoform_100525_10	chr2	-	1252	6	NIC	ENSMUSG00000026922.14	novel	1273	6	NA	NA	-37	-25	combination_of_known_junctions	FALSE	canonical	3	216	junction_5	206.37577377202	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACCAGAGGTCTCTTTC	9901	False	NA	-24	True	TATAAA	-20	NA	26493765	26483093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26493673
Isoform_100527_429	chr2	-	1376	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	91	22	-30	-22	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGAGGTCTCTTTCAGA	9572	False	NA	-21	True	TATAAA	-23	NA	26494253	26483090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
Isoform_100528_69	chr2	-	1504	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	-19	4	-19	-4	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGGGTAGAGTTCTTT	9462	False	NA	-3	True	TATAAA	-41	NA	26494363	26483072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
Isoform_100529_265	chr2	-	1429	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	45	15	45	-15	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTTTCAGAGAGTGGG	9526	False	NA	-14	True	TATAAA	-30	NA	26494299	26483083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
Isoform_10053_4	chr10	+	1205	1	FSM	ENSMUSG00000074862.12	ENSMUST00000099442.4	2785	1	-730	2310	-8	-2046	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	81442128	81443333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81442100_81443300
Isoform_100533_22	chr2	-	1286	6	FSM	ENSMUSG00000026922.14	ENSMUST00000131940.8	1273	6	-30	17	-30	-17	multi-exon	FALSE	canonical	3	206	junction_5	210.357219985433	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTCTTTCAGAGAGTG	9572	False	NA	-16	True	TATAAA	-28	NA	26494253	26483085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494135
Isoform_100534_21	chr2	-	1349	6	FSM	ENSMUSG00000026922.14	ENSMUST00000131940.8	1273	6	-80	4	41	-4	multi-exon	FALSE	canonical	3	206	junction_5	210.357219985433	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGGGTAGAGTTCTTT	9522	False	NA	-3	True	TATAAA	-41	NA	26494303	26483072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494135
Isoform_100537_6	chr2	-	1685	7	NNC	ENSMUSG00000015787.16	novel	1811	6	NA	NA	48	-209	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	1.7950549357115	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATAGGAAGTTTTTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	26746762	26732723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_26733887_26735967_26736103_26736585_26736622_26738262_26738320_26738932_26739003_26746433_26746565_26746669
Isoform_10054_3	chr10	+	160	1	Intergenic	novelGene_733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAGAAAAAAAAAAG	2982	False	NA	NA	False	NA	NA	NA	12611903	12612063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_12611900_12612100
Isoform_100543_839	chr2	-	2589	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	45	337	16	0	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	839	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTGTTCGTATTTG	NA	False	NA	-6	True	NA	NA	NA	26792846	26780783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
Isoform_100549_128	chr2	-	1368	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	-74	-321	34	-5	multi-exon	FALSE	canonical	3	133	junction_1	17.7951304200522	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTTC	NA	False	NA	-9	True	AATAAA	-13	NA	26800655	26795278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
Isoform_10055_3	chr10	+	776	1	NIC	ENSMUSG00000054708.18	novel	3161	15	NA	NA	0	-1424	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7966	False	NA	NA	False	NA	NA	NA	81469532	81470308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81469500_81470300
Isoform_100550_38	chr2	-	1424	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	-128	-323	-20	-3	multi-exon	FALSE	canonical	3	133	junction_1	17.7951304200522	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTGTCTGTCTTTCTT	NA	False	NA	-7	True	AATAAA	-15	NA	26800709	26795276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
Isoform_100551_23	chr2	-	3521	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	-20	5	-20	-5	multi-exon	FALSE	canonical	3	168	junction_1	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTTC	NA	False	NA	-9	True	AATAAA	-13	NA	26800709	26795278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26798314_26799004_26799086_26800304
Isoform_100552_148	chr2	-	3463	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	37	6	37	-6	multi-exon	FALSE	canonical	3	168	junction_1	2.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCTGTTGTCTGTCTTT	NA	False	NA	-10	True	AATAAA	-12	NA	26800652	26795279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26798314_26799004_26799086_26800304
Isoform_100553_206	chr2	-	977	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	192	4	-6	-4	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGCTCAGTCTGA	NA	False	NA	-9	True	AATAAA	-15	NA	26806350	26803398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
Isoform_100554_13	chr2	-	1152	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	17	4	17	-4	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGCTCAGTCTGA	NA	False	NA	-9	True	AATAAA	-15	NA	26806525	26803398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
Isoform_100555_6	chr2	-	1006	9	NIC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	115.533544912289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806360	26803399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805762_26805966_26806019_26806268
Isoform_100556_19	chr2	-	1018	9	FSM	ENSMUSG00000015790.17	ENSMUST00000167661.7	1151	9	129	4	6	-4	multi-exon	FALSE	canonical	3	32	junction_7	110.059571937201	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGCTCAGTCTGA	NA	False	NA	-9	True	AATAAA	-15	NA	26806351	26803398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805782_26805966_26806019_26806268
Isoform_100557_3	chr2	-	1033	9	NIC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	4	-6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	119.405820628644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCATGGCTCAGTCT	NA	False	NA	-11	True	AATAAA	-13	NA	26806353	26803400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805797_26805966_26806019_26806268
Isoform_100558_20	chr2	-	1052	8	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	328	junction_3	29.0460577254084	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	-5	True	AATAAA	-19	NA	26806350	26803394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
Isoform_10056_3	chr10	+	2661	1	Genic_Genomic	ENSMUSG00000096856.8	novel	NA	NA	NA	NA	-17	-12529	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAGCAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	81484875	81487536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_81484900_81487500
Isoform_100565_1311	chr2	-	2796	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	485	0	-60	0	multi-exon	TRUE	canonical	3	778	junction_1	38.262252939418	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGGTCCTATATGG	NA	False	NA	-2	True	AATAAA	-18	NA	26823455	26810051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
Isoform_100566_241	chr2	-	2827	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	454	0	-91	0	multi-exon	FALSE	canonical	3	778	junction_1	38.262252939418	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGGTCCTATATGG	NA	False	NA	-2	True	AATAAA	-18	NA	26823486	26810051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
Isoform_100567_91	chr2	-	2068	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	427	786	-118	-786	multi-exon	FALSE	canonical	3	778	junction_1	38.262252939418	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGTTTCTCTTTTTGG	NA	False	NA	-1	True	TTTAAA	-20	NA	26823513	26810837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
Isoform_10057_10	chr10	-	176	1	Intergenic	novelGene_1076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	9155	False	NA	NA	False	NA	NA	NA	81490544	81490368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_81490400_81490500
Isoform_100577_22	chr2	-	3545	7	ISM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	64	0	2	0	intron_retention	FALSE	canonical	3	152	junction_5	25.8182751812226	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	-6	True	AATAAA	-14	NA	26854334	26843574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394
Isoform_100578_388	chr2	-	2215	8	FSM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	64	-1	2	1	multi-exon	FALSE	canonical	3	152	junction_5	23.9344342497821	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGTGTGTGGAAGTTC	NA	False	NA	-8	True	AATAAA	-12	NA	26854334	26843576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
Isoform_100579_6	chr2	-	3367	6	NIC	ENSMUSG00000052406.15	novel	2281	8	NA	NA	-16	1	intron_retention	FALSE	canonical	3	43	junction_4	64.1728914729576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGTGTGTGGAAGTTC	NA	False	NA	-8	True	AATAAA	-12	NA	26854352	26843576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850614_26850753_26852394
Isoform_100580_12	chr2	-	2038	7	NIC	ENSMUSG00000052406.15	novel	2281	8	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	59.1629106789042	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGTGTGTGGAAGTTC	NA	False	NA	-8	True	AATAAA	-12	NA	26854351	26843576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850614_26850753_26852394_26852736_26854063
Isoform_100586_7	chr2	-	1712	5	ISM	ENSMUSG00000052406.15	ENSMUST00000136710.2	1121	7	-66	3282	-21	213	5prime_fragment	FALSE	canonical	3	152	junction_2	27.518175811634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGTTTTGCCTACCC	NA	False	NA	NA	False	NA	NA	NA	26854357	26847834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
Isoform_100589_5	chr2	-	1519	4	NIC	ENSMUSG00000052406.15	novel	1121	7	NA	NA	-20	215	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	78.3893416791396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTTTGCCTACCCTA	NA	False	NA	NA	False	NA	NA	NA	26854356	26847832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26848580_26850614_26850753_26852394_26852736_26854063
Isoform_100590_5	chr2	-	2126	10	FSM	ENSMUSG00000036067.13	ENSMUST00000045702.6	2138	10	9	3	2	-3	multi-exon	FALSE	canonical	0	0	junction_5	0.916245694581702	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAGGAGTGGGCTCTCT	NA	False	NA	NA	False	AATAAA	-26	NA	26918001	26911377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26912082_26912730_26912877_26913099_26913262_26913546_26913656_26914194_26914348_26914596_26914806_26915234_26915335_26915912_26916120_26917152_26917316_26917828
Isoform_100594_67	chr2	-	5156	27	NIC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_23	9.47466256756571	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTTAGCCTTCTGTG	NA	False	NA	-2	True	AATAAA	-19	NA	27317067	27152115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27169202_27169220_27171912_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
Isoform_100601_15	chr2	-	5322	13	FSM	ENSMUSG00000026918.17	ENSMUST00000113941.9	5289	13	-14	-19	-1	-2	multi-exon	FALSE	canonical	2	24	junction_5	87.0507514805779	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTGTCTGTGTGGTGCT	NA	False	NA	-8	True	AATAAA	-12	NA	27365699	27335592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27343411_27343463_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
Isoform_10061_63	chr10	+	213	1	Intergenic	novelGene_734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCCAACCAAACTTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	12658744	12658957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_12658700_12659000
Isoform_100613_267	chr2	-	5234	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	37	1	4	-1	multi-exon	TRUE	canonical	3	192	junction_7	30.2258714644446	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTGTGTGGTGCTC	NA	False	NA	-7	True	AATAAA	-13	NA	27365661	27335591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
Isoform_10063_9	chr10	+	1552	1	Intergenic	novelGene_1077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCTATGTG	NA	False	NA	NA	False	ATTAAA	-25	NA	81832842	81834394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81832800_81834400
Isoform_100630_117	chr2	-	784	3	FSM	ENSMUSG00000026831.17	ENSMUST00000086370.11	812	3	27	1	11	-1	multi-exon	FALSE	canonical	3	128	junction_1	7	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCCACGCCTCTTAT	NA	False	NA	-1	True	ATTAAA	-18	NA	28356317	28352013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_28352447_28355148_28355228_28356045
Isoform_100631_7	chr2	-	961	4	NNC	ENSMUSG00000026831.17	novel	812	3	NA	NA	-192	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	63.8957484240279	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCCACGCCTCTTAT	NA	False	NA	-1	True	ATTAAA	-18	NA	28356536	28352013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_28352447_28355148_28355228_28356045_28356125_28356166
Isoform_100633_5	chr2	-	2577	13	NIC	ENSMUSG00000026816.15	novel	2739	12	NA	NA	-1	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	64.7861332042248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGCACTGGTGTTTG	NA	False	NA	-56	True	AATAAA	-15	NA	28473001	28456329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28471142_28471278_28472836
Isoform_100634_98	chr2	-	2620	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	112	7	22	-7	multi-exon	FALSE	canonical	3	147	junction_7	20.5992858738452	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGCACTGGTGTTTG	NA	False	NA	-56	True	AATAAA	-15	NA	28473179	28456329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
Isoform_100635_305	chr2	-	2441	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	292	6	1	-6	multi-exon	FALSE	canonical	3	147	junction_7	20.5992858738452	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCACTGGTGTTTGA	NA	False	NA	-55	True	AATAAA	-16	NA	28472999	28456328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
Isoform_100638_17	chr2	-	2705	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	34	0	22	0	multi-exon	FALSE	canonical	3	147	junction_7	20.5992858738452	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGTTTGATGCCCT	NA	False	NA	-49	True	AATAAA	-22	NA	28473257	28456322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
Isoform_10064_29	chr10	-	176	1	Intergenic	novelGene_735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCACGTCAAG	NA	False	NA	NA	False	NA	NA	NA	12673854	12673678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_12673700_12673900
Isoform_100640_6	chr2	-	2467	12	FSM	ENSMUSG00000026816.15	ENSMUST00000113889.9	2667	12	200	0	-1	0	multi-exon	TRUE	canonical	2	4	junction_2	52.8098100077803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGTTTGATGCCCT	NA	False	NA	-49	True	AATAAA	-22	NA	28473001	28456322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_28457190_28457619_28457815_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
Isoform_100646_6	chr2	-	3236	6	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	25	-3849	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	92.4588557143122	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAGGTGACTATTAGAA	NA	False	NA	-2	True	AATAAA	-20	NA	28730339	28716165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28729894
Isoform_100653_192	chr2	-	6974	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-29	-4	-29	-2	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGATTTTTTTTTATTC	NA	False	NA	-1	True	AATAAA	-23	NA	28730327	28712312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
Isoform_100655_40	chr2	-	6998	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-54	-3	12	3	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGGATTTTTTTTTATT	NA	False	NA	-2	True	AATAAA	-22	NA	28730352	28712313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
Isoform_100658_6	chr2	-	6869	4	NIC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	89.7416043736435	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGATTTTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	28730357	28712316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_28716810_28717489_28717579_28723561_28725386_28729894
Isoform_100659_3	chr2	-	1230	6	FSM	ENSMUSG00000079502.9	ENSMUST00000157048.4	1042	6	0	-188	0	188	multi-exon	FALSE	canonical	1	3	junction_4	3.07245829914744	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCGCTCTGGCTTTAGA	NA	False	NA	NA	False	AATAAA	-17	NA	28945078	28845193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_28845637_28846006_28846109_28852643_28852750_28874307_28874534_28875813_28875914_28944825
Isoform_10066_6	chr10	-	179	1	Intergenic	novelGene_1078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATACT	NA	False	NA	NA	False	NA	NA	NA	81879619	81879440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_81879400_81879600
Isoform_100662_7	chr2	-	2826	4	FSM	ENSMUSG00000079497.5	ENSMUST00000129574.3	1091	4	11	-1746	11	1746	multi-exon	TRUE	canonical	3	10	junction_3	6.12825877028341	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAACCAGAAGAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	29641686	29633184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29635352_29636461_29636606_29637219_29637663_29641614
Isoform_100664_67	chr2	-	2551	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	857	0	3	0	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677657	29666121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_100665_4	chr2	-	3974	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.2362155894325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTGGTGTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	29677686	29664695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_29665044_29665075_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_100666_27	chr2	-	2489	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	15	1426	3	0	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677657	29666121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
Isoform_100667_4	chr2	-	3907	8	NNC	ENSMUSG00000039826.14	novel	3930	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.4944959851495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTGGTGTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	29677681	29664695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_29665044_29665075_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
Isoform_100669_7	chr2	-	1598	7	FSM	ENSMUSG00000039826.14	ENSMUST00000177467.8	744	7	-35	-819	3	750	multi-exon	FALSE	canonical	2	14	junction_1	60.8041025662651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGGTTTTCTTTCTTAT	NA	False	NA	-8	True	TATAAA	-19	NA	29677669	29666949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29667969_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_10067_7	chr10	+	197	1	Intergenic	novelGene_1079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTTCATTATATCCATA	NA	False	NA	NA	False	NA	NA	NA	81901430	81901627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81901400_81901600
Isoform_100670_4	chr2	-	2413	7	FSM	ENSMUSG00000039826.14	ENSMUST00000177467.8	744	7	-24	-1645	2	-2	multi-exon	FALSE	canonical	2	14	junction_1	60.8041025662651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGGCATGTGATGTTT	NA	False	NA	-8	True	TATAAA	-21	NA	29677658	29666123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29667969_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_100672_8	chr2	-	3349	7	NIC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	126	junction_1	24.0791518861349	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677680	29666121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_100677_207	chr2	-	1804	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	-3	13	-3	-13	multi-exon	FALSE	canonical	3	156	junction_3	11.9973955507018	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTCTACCTGAGA	NA	False	NA	-13	True	NA	NA	NA	29938896	29921570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
Isoform_100678_228	chr2	-	1758	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	43	13	23	-13	multi-exon	FALSE	canonical	3	156	junction_3	11.9973955507018	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTCTACCTGAGA	NA	False	NA	-13	True	NA	NA	NA	29938850	29921570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
Isoform_10068_4	chr10	+	172	1	Intergenic	novelGene_736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTTAAAGCCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	12682353	12682525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_12682400_12682500
Isoform_100682_6	chr2	-	2070	7	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	1	-14	intron_retention	FALSE	canonical	3	156	junction_1	13.6798716693136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	False	NA	-14	True	NA	NA	NA	29938892	29921571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
Isoform_100684_125	chr2	-	1180	5	FSM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	14	-7	-5	0	multi-exon	FALSE	canonical	3	80	junction_4	253.22754095872	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983633	29980955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983458
Isoform_100686_774	chr2	-	1139	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	24	2	-8	-2	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGCCGTGGACTCTTT	NA	False	NA	-5	True	ATTAAA	-14	NA	29983636	29980957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
Isoform_100687_55	chr2	-	1168	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983663	29980955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
Isoform_10069_14	chr10	-	384	1	Intergenic	novelGene_1080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGCTGGGCTGGAGAGA	8460	False	NA	NA	False	NA	NA	NA	81977945	81977561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_81977600_81977900
Isoform_100693_47	chr2	-	1241	4	FSM	ENSMUSG00000015335.17	ENSMUST00000137001.2	846	4	-8	-387	-8	0	multi-exon	FALSE	canonical	3	619	junction_3	30.9443945740671	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983636	29980955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29981846_29981999_29982078_29982416_29982554_29983500
Isoform_100695_78	chr2	-	4116	16	FSM	ENSMUSG00000039686.15	ENSMUST00000113677.3	4189	16	71	2	-57	-2	multi-exon	FALSE	canonical	3	68	junction_8	7.41889479639656	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014523	29987296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
Isoform_100698_10	chr2	-	4180	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	20.8859335970941	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014593	29987296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997512_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
Isoform_100699_3	chr2	-	2159	8	FSM	ENSMUSG00000039686.15	ENSMUST00000154231.8	3934	8	26	1749	20	120	multi-exon	FALSE	canonical	3	72	junction_1	7.43955232359516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTTGTGTAATGTGG	NA	False	NA	NA	False	AGTAAA	-20	NA	30014571	29997068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
Isoform_10070_32	chr10	-	211	1	Intergenic	novelGene_1081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCGGGTGTGGTGGCGCA	8460	False	NA	NA	False	NA	NA	NA	81977945	81977734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_81977700_81977900
Isoform_100705_598	chr2	-	1804	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	4	-3	-4	0	multi-exon	FALSE	canonical	3	299	junction_5	38.9436974393538	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTAGACCCTGATGCT	NA	False	NA	-25	True	AATAAA	-18	NA	30068458	30063479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
Isoform_100707_76	chr2	-	2020	11	FSM	ENSMUSG00000039660.17	ENSMUST00000144093.8	2010	11	11	-21	2	1	multi-exon	FALSE	canonical	3	299	junction_5	40.8044115262063	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCACCTATGCTCACGTG	NA	False	NA	-9	True	AATAAA	-34	NA	30068460	30063463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067978_30068401
Isoform_10071_50	chr10	+	154	1	Intergenic	novelGene_1082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6889	False	NA	NA	False	NA	NA	NA	82185224	82185378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_82185200_82185400
Isoform_100714_4	chr2	-	1804	13	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	50.5477634410158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGCAGCTTCTCTCTTC	9487	False	NA	-7	True	AATAAA	-21	NA	30084173	30075139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065
Isoform_100715_16	chr2	-	1925	14	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	49.6595510039827	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095812	30075137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065_30084125_30095644
Isoform_100716_62	chr2	-	1708	12	ISM	ENSMUSG00000039648.15	ENSMUST00000113661.10	2057	13	4199	-6	-48	1	3prime_fragment	FALSE	canonical	3	127	junction_6	13.3880420309128	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGCTTCTCTCTTCCTT	9488	False	NA	-4	True	AATAAA	-24	NA	30084172	30075136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065
Isoform_100717_10	chr2	-	2054	14	FSM	ENSMUSG00000039648.15	ENSMUST00000113663.9	2026	14	-25	-3	-10	-2	multi-exon	FALSE	canonical	3	14	junction_13	49.789616559678	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGCAGCTTCTCTCTTC	NA	False	NA	-7	True	AATAAA	-21	NA	30095838	30075139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30087968_30088172_30095644
Isoform_100719_51	chr2	-	1842	13	FSM	ENSMUSG00000039648.15	ENSMUST00000044038.10	1876	13	33	1	2	1	multi-exon	FALSE	canonical	3	91	junction_12	20.7811011899434	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGCTTCTCTCTTCCTT	NA	False	NA	-4	True	AATAAA	-24	NA	30095826	30075136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
Isoform_10072_4	chr10	+	4430	1	Genic_Genomic	ENSMUSG00000073427.5	novel	NA	NA	NA	NA	-5	-20957	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	82190083	82194513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_82190100_82194500
Isoform_100722_3	chr2	-	2358	10	NIC	ENSMUSG00000039648.15	novel	1850	13	NA	NA	-49	-3	intron_retention	FALSE	canonical	3	133	junction_9	11.5801021339235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCTCAAGGCAGCTTCT	9487	False	NA	-13	True	AATAAA	-15	NA	30084173	30075145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065
Isoform_100723_5	chr2	-	1805	11	NIC	ENSMUSG00000039648.15	novel	1850	13	NA	NA	-48	1	intron_retention	FALSE	canonical	3	127	junction_5	13.733535597216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGCTTCTCTCTTCCTT	9488	False	NA	-4	True	AATAAA	-24	NA	30084172	30075136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065
Isoform_100724_15	chr2	-	1939	12	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	2	1	intron_retention	FALSE	canonical	3	91	junction_11	21.2688419140215	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGCTTCTCTCTTCCTT	NA	False	NA	-4	True	AATAAA	-24	NA	30095826	30075136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
Isoform_100725_13	chr2	-	1765	12	FSM	ENSMUSG00000026860.17	ENSMUST00000100215.11	1749	12	-19	3	1	-1	multi-exon	FALSE	canonical	3	26	junction_3	118.792269553979	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	-13	True	AATAAA	-13	NA	30249271	30234823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_100733_153	chr2	-	1735	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	74	1	-2	-1	multi-exon	FALSE	canonical	3	213	junction_5	55.8	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATCTCAGTCCATGA	NA	False	NA	-11	True	AATAAA	-15	NA	30249254	30234821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_100734_47	chr2	-	1802	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	7	1	-4	-1	multi-exon	FALSE	canonical	3	213	junction_5	55.8	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATCTCAGTCCATGA	NA	False	NA	-11	True	AATAAA	-15	NA	30249321	30234821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_100739_6	chr2	-	1679	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	16	-1	-4	-1	multi-exon	FALSE	canonical	3	12	junction_5	106.475639131188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATCTCAGTCCATGA	NA	False	NA	-11	True	AATAAA	-15	NA	30249261	30234821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_10074_35	chr10	+	175	1	Intergenic	novelGene_1083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATTTTTTGAGTAAAT	NA	False	NA	7	True	NA	NA	NA	82444256	82444431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_82444300_82444400
Isoform_100740_10	chr2	-	1306	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	6	382	1	-52	multi-exon	FALSE	canonical	3	12	junction_5	106.475639131188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGCCCCTCTGCTAG	NA	False	NA	-8	True	ATTAAA	-20	NA	30249271	30235204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_100744_7	chr2	-	4872	9	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	236	junction_2	45.3782712319454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATCTCAGTCCATGA	NA	False	NA	-11	True	AATAAA	-15	NA	30249271	30234821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_100746_7	chr2	-	2261	10	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	213	junction_4	53.8401841759365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	-13	True	AATAAA	-13	NA	30249369	30234823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_100750_5	chr2	-	4219	9	NIC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	1	-52	intron_retention	FALSE	canonical	3	16	junction_4	109.984942151187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGCCCCTCTGCTAG	NA	False	NA	-8	True	ATTAAA	-20	NA	30249271	30235204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_100751_19	chr2	-	5279	8	NIC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	7	-1	intron_retention	FALSE	canonical	3	286	junction_4	33.7463527885698	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATCTCAGTCCATGA	NA	False	NA	-11	True	AATAAA	-15	NA	30249265	30234821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_100753_125	chr2	-	2760	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	237	836	24	561	multi-exon	FALSE	canonical	3	47	junction_2	7.8897731722819	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	-5	True	AATAAA	-19	NA	30305588	30291948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
Isoform_100754_136	chr2	-	2705	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	292	836	3	561	multi-exon	FALSE	canonical	3	47	junction_2	7.8897731722819	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	-5	True	AATAAA	-19	NA	30305533	30291948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
Isoform_100755_3	chr2	-	4194	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	269	-630	4	0	multi-exon	TRUE	canonical	3	47	junction_2	7.8897731722819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCACACTTGGCTTGT	NA	False	NA	NA	False	AGTAAA	-23	NA	30305556	30290482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
Isoform_100756_11	chr2	-	3205	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	-208	836	-208	561	multi-exon	FALSE	canonical	3	47	junction_2	7.8897731722819	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	-5	True	AATAAA	-19	NA	30306033	30291948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
Isoform_100757_6	chr2	-	2742	14	NIC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	5	561	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	18.006244807594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	-5	True	AATAAA	-19	NA	30305555	30291948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30292806_30293500_30293654_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
Isoform_100758_6	chr2	-	1440	7	NIC	ENSMUSG00000044320.15	novel	1672	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	8.78287475083693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGCCACTCTAGGTGC	NA	False	NA	NA	False	AATAAA	-42	NA	30691723	30685584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30685818_30686120_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
Isoform_100759_7	chr2	-	1547	6	ISM	ENSMUSG00000044320.15	ENSMUST00000050003.9	1672	7	1	262	1	0	intron_retention	FALSE	canonical	3	17	junction_1	5.63560112144215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTGCCTGATTGGGG	NA	False	NA	NA	False	AGTAAA	-6	NA	30691718	30685574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925
Isoform_10076_7	chr10	-	181	1	Intergenic	novelGene_1084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAAAAGAGTTTA	1842	False	NA	NA	False	NA	NA	NA	82688780	82688599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_82688600_82688800
Isoform_100760_9	chr2	-	1423	7	FSM	ENSMUSG00000044320.15	ENSMUST00000050003.9	1672	7	-15	264	-15	1	multi-exon	FALSE	canonical	3	15	junction_6	6.6248689714506	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTAGGTGCCTGATTGG	NA	False	NA	NA	False	AGTAAA	-4	NA	30691734	30685576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
Isoform_100761_4	chr2	-	3060	5	ISM	ENSMUSG00000039483.11	ENSMUST00000129628.8	784	6	-9	-1370	-9	-3	intron_retention	FALSE	canonical	3	80	junction_2	14.4460202131937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTGTCTTTGTATG	1741	False	NA	-22	True	ATTAAA	-16	NA	30718286	30713111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934
Isoform_100762_335	chr2	-	2097	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	2048	2	6	-2	multi-exon	FALSE	canonical	3	80	junction_2	13.3356664625357	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTGTCTTTGTATGA	1730	False	NA	-21	True	ATTAAA	-17	NA	30718297	30713110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
Isoform_100764_10	chr2	-	2822	5	FSM	ENSMUSG00000039483.11	ENSMUST00000148036.7	2792	5	-34	4	3	-4	multi-exon	FALSE	canonical	3	92	junction_4	10.6858551365813	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTCTGTGTCTTTGTAT	1727	False	NA	-23	True	ATTAAA	-15	NA	30718300	30713112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30714517_30714652_30715573_30715666_30715774_30716934_30717111_30718085
Isoform_100765_12	chr2	-	2907	4	NIC	ENSMUSG00000039483.11	novel	2792	5	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	92	junction_3	6.48074069840786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTGTCTTTGTATGA	1738	False	NA	-21	True	ATTAAA	-17	NA	30718289	30713110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30714517_30714652_30715774_30716934_30717111_30718085
Isoform_100766_10	chr2	-	3606	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	38	3	38	-3	multi-exon	FALSE	canonical	3	78	junction_1	10.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTGTGGTCATGAT	8449	False	NA	NA	False	NA	NA	NA	30793271	30779485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30782839_30790878_30790962_30793101
Isoform_10077_4	chr10	-	521	1	NIC	ENSMUSG00000112375.2	novel	646	4	NA	NA	39	-12716	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-25	NA	82694803	82694282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_82694300_82694800
Isoform_100771_36	chr2	-	1299	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	38	2310	38	501	multi-exon	FALSE	canonical	3	78	junction_1	10.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCGGTGTCTAAGACCC	8449	False	NA	NA	False	ATTAAA	-21	NA	30793271	30781792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30782839_30790878_30790962_30793101
Isoform_100772_16	chr2	-	1322	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	14	2311	14	500	multi-exon	FALSE	canonical	3	78	junction_1	10.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTCGGTGTCTAAGACC	8425	False	NA	NA	False	ATTAAA	-20	NA	30793295	30781793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30782839_30790878_30790962_30793101
Isoform_100775_1196	chr2	-	1362	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	29	10	-16	-10	multi-exon	FALSE	canonical	0	0	junction_3	220.841996685413	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTTCAGCGGTGGCTT	NA	False	NA	-18	True	TTTAAA	-20	NA	30857916	30850648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
Isoform_100778_15	chr2	-	4586	4	NIC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	466	junction_1	30.5759527879163	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGTGGCTTTGTGTGTCT	NA	False	NA	-9	True	TTTAAA	-29	NA	30857911	30850639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30851210_30853486_30853615_30853705_30857368_30857685
Isoform_100783_277	chr2	-	1283	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	37	664	37	-664	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGTTGCCTGTCTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	30871916	30862852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
Isoform_100786_31	chr2	-	1595	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	-267	656	-7	-656	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTCTTCTAATGTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	30872220	30862844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
Isoform_100787_8	chr2	-	1271	9	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	-21	-663	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	113.962438987589	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGCCTGTCTTCTA	NA	False	NA	NA	False	ATTAAA	-10	NA	30872234	30862851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30872120
Isoform_100788_16	chr2	-	2714	8	NIC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	38	-664	intron_retention	FALSE	canonical	3	354	junction_3	15.6973935182025	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGTTGCCTGTCTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	30871915	30862852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30871555_30871789
Isoform_100791_4	chr2	-	3309	7	NNC	ENSMUSG00000075415.14	novel	4378	14	NA	NA	14929	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.2666784203088	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTTCTCTGTTGTATG	1519	False	NA	-6	True	AATAAA	-17	NA	30930527	30916218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_30916452_30916481_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416
Isoform_100793_107	chr2	-	4698	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	27.5474540061731	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTTCTCTGTTGTATG	4781	False	NA	-6	True	AATAAA	-17	NA	31032007	30916218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_100798_15	chr2	-	4703	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	39.4208066888541	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTCTCTGTTGTATGA	4780	False	NA	-5	True	AATAAA	-18	NA	31032008	30916217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30918896_30923041_30923201_30926129_30926270_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_100802_5	chr2	-	3181	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-225	-1097	-19	792	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCAGCCTTTCCTTTCC	4749	False	NA	NA	False	AATAAA	-28	NA	31032039	30921913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_100803_37	chr2	-	2474	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-203	-412	3	107	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTAGCCTGGAACGTT	4771	False	NA	NA	False	AATAAA	-15	NA	31032017	30922598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_100805_36	chr2	-	5438	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-196	-3383	-2	-1421	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTGTATTTTAAGTG	4778	False	NA	-15	True	AATAAA	-17	NA	31032010	30919627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_100807_6	chr2	-	5427	15	NIC	ENSMUSG00000075415.14	novel	1859	15	NA	NA	12	-1421	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	39.2753233011285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTGTATTTTAAGTG	4792	False	NA	-15	True	AATAAA	-17	NA	31031996	30919627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30923201_30926129_30926270_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_100808_57	chr2	-	1982	9	FSM	ENSMUSG00000075415.14	ENSMUST00000113552.9	1910	9	-67	-5	2	5	multi-exon	FALSE	canonical	3	133	junction_4	13.559475469206	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTGTCTTCTTGTTTC	4770	False	NA	-8	True	NA	NA	NA	31032018	30943241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_100809_4	chr2	-	474	2	FSM	ENSMUSG00000087269.2	ENSMUST00000133550.2	920	2	38	408	38	-408	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTATGTTGTTTG	8924	False	NA	NA	False	TATAAA	-22	NA	31042265	31041060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_31041263_31041993
Isoform_100810_15	chr2	-	3064	2	FSM	ENSMUSG00000050592.9	ENSMUST00000130178.2	525	2	9	-2548	9	-5	multi-exon	TRUE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCCTTGGCTCTGGTG	NA	False	NA	NA	False	AATAAA	-30	NA	31969355	31956883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_31959786_31969193
Isoform_100812_8	chr2	-	3999	2	FSM	ENSMUSG00000050592.9	ENSMUST00000056406.7	4107	2	103	5	103	-5	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCCTTGGCTCTGGTG	NA	False	NA	NA	False	AATAAA	-30	NA	31973692	31956883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_31959786_31972595
Isoform_100814_6	chr2	-	4563	3	ISM	ENSMUSG00000050592.9	ENSMUST00000139629.2	3236	6	-168	16813	20	-1	5prime_fragment	FALSE	canonical	2	4	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGGCTCTGGTGGCAA	NA	False	NA	NA	False	AATAAA	-34	NA	31974849	31956879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_31959786_31972595_31973621_31974217
Isoform_100815_6	chr2	-	4350	3	ISM	ENSMUSG00000050592.9	ENSMUST00000139629.2	3236	6	41	16817	41	-5	5prime_fragment	FALSE	canonical	2	4	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCCTTGGCTCTGGTG	NA	False	NA	NA	False	AATAAA	-30	NA	31974640	31956883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_31959786_31972595_31973621_31974217
Isoform_100817_13	chr2	-	2971	2	NNC	ENSMUSG00000050592.9	novel	4107	2	NA	NA	4900	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCCTTGGCTCTGGTG	NA	False	NA	NA	False	AATAAA	-30	NA	31964464	31956883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_31959786_31964395
Isoform_100818_502	chr2	-	1917	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	87	1	-11	-1	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	32150084	32145014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_100819_26	chr2	-	1991	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	13	1	13	-1	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	32150158	32145014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_100822_9	chr2	-	3354	6	NIC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	136	junction_1	18.9567929777165	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	32150098	32145014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32146224_32146629_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_100824_8	chr2	-	2312	6	NIC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	135	junction_1	19.2831532691103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	32150073	32145014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_100825_7	chr2	-	3747	5	NIC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	158	junction_1	12.3592070943083	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAATTTGTCCTGTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	32150087	32145016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_100827_8	chr2	-	3894	4	FSM	ENSMUSG00000002550.17	ENSMUST00000134351.2	793	4	-8	-3093	-8	-1	multi-exon	FALSE	canonical	3	158	junction_1	14.0791413879619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	32150081	32145014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32148197_32148288_32148680_32149591_32149752_32149920
Isoform_100831_1614	chr2	-	712	5	FSM	ENSMUSG00000044627.12	ENSMUST00000183946.8	768	5	56	0	-7	0	multi-exon	FALSE	canonical	3	3309	junction_1	124.51380445557	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178024	32168827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
Isoform_100835_32	chr2	-	585	4	FSM	ENSMUSG00000044627.12	ENSMUST00000113397.9	580	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	66	junction_2	1606.82426612938	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178022	32168827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32169144_32170720_32170816_32177608_32177658_32177897
Isoform_100836_21	chr2	-	2306	4	NIC	ENSMUSG00000044627.12	novel	768	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	3426	junction_2	83.7947227190087	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178041	32168827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32170816_32171697_32171823_32177608_32177658_32177897
Isoform_100841_49	chr2	-	597	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	76	7	0	-7	multi-exon	FALSE	canonical	3	268	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCCCCTTCTTCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	32271874	32269119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32269546_32271703
Isoform_100843_18	chr2	-	650	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	23	7	23	-7	multi-exon	FALSE	canonical	3	268	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCCCCTTCTTCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	32271927	32269119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32269546_32271703
Isoform_100846_29	chr2	-	3298	11	FSM	ENSMUSG00000026819.16	ENSMUST00000028160.15	3294	11	-4	0	-4	0	multi-exon	FALSE	canonical	3	9	junction_7	31.7200252206709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8172	False	NA	-6	True	AATAAA	-17	NA	32341438	32304498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32341078
Isoform_100850_457	chr2	-	3260	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	21	-3	-2	0	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8174	False	NA	-6	True	AATAAA	-17	NA	32341436	32304498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
Isoform_100854_15	chr2	-	4173	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	23	-918	0	915	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAAATA	8176	False	NA	NA	False	NA	NA	NA	32341434	32303583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
Isoform_100859_1497	chr2	-	2248	15	FSM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	18	7	18	-6	multi-exon	FALSE	canonical	3	280	junction_8	41.2442327446381	1497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGACTCCTATTCTCCT	NA	False	NA	-20	True	AATAAA	-13	NA	32584179	32572627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
Isoform_100881_1345	chr2	-	1701	7	FSM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	30	2	3	-2	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGCGTTTCCTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	32602766	32597451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
Isoform_100883_79	chr2	-	2180	7	FSM	ENSMUSG00000093280.3_ENSMUSG00000105841.3_ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	-451	4	-159	2	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGCTGCGTTTCCTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	32603247	32597453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
Isoform_100884_22	chr2	-	3368	7	FSM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	22	-1657	-5	3	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	32602774	32595792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
Isoform_100892_94	chr2	-	1863	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	1092	junction_4	84.0514128376198	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGCGTTTCCTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	32602771	32597451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32598302_32599478_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
Isoform_10090_11	chr10	+	163	1	Intergenic	novelGene_1085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAACCCTCACCC	NA	False	NA	NA	False	NA	NA	NA	82737839	82738002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_82737800_82738000
Isoform_100900_52	chr2	-	3569	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	-36	359	-36	0	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTGCCTGGGCCCAC	5113	False	NA	-23	True	AATAAA	-15	NA	32737293	32677972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
Isoform_100904_11	chr2	-	3977	26	NIC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	-28	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_25	6.16389487256231	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTTACACAGTTTGCA	NA	False	NA	-9	True	AATAAA	-17	NA	32851654	32815235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851191_32851573
Isoform_100905_4	chr2	-	4050	26	NIC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	3	junction_25	6.16389487256231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTACACAGTTTGCAT	NA	False	NA	-8	True	AATAAA	-18	NA	32851627	32815234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851551
Isoform_100907_28	chr2	-	4069	26	FSM	ENSMUSG00000026792.17	ENSMUST00000113200.8	4030	26	-40	1	-40	-1	multi-exon	FALSE	canonical	3	22	junction_16	3.74165738677394	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTACACAGTTTGCATAG	NA	False	NA	-6	True	AATAAA	-20	NA	32851666	32815232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851573
Isoform_100908_4	chr2	-	2634	11	NNC	ENSMUSG00000026792.17	novel	3981	25	NA	NA	1201	-1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_10	8.40238061504	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTACACAGTTTGCATAG	NA	False	NA	-6	True	AATAAA	-20	NA	32830640	32815232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32830586
Isoform_10091_80	chr10	+	185	1	Intergenic	novelGene_1086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGGAGCCATTA	NA	False	NA	NA	False	NA	NA	NA	82751203	82751388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_82751200_82751400
Isoform_100910_777	chr2	-	2091	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	26	-9	12	9	multi-exon	FALSE	canonical	3	167	junction_4	8.32666399786453	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGCCAGAAGTCTTTTG	3976	False	NA	-4	True	AATAAA	-24	NA	32872068	32862992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
Isoform_100911_19	chr2	-	2232	9	NIC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	16	1	intron_retention	FALSE	canonical	3	167	junction_4	8.8175960442742	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTCAGTGGAGCCAGAA	3980	False	NA	-12	True	AATAAA	-16	NA	32872064	32863000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
Isoform_100915_21	chr2	-	2782	7	NIC	ENSMUSG00000026791.15	novel	1339	9	NA	NA	17	9	intron_retention	FALSE	canonical	3	169	junction_5	8.47381587925744	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGCCAGAAGTCTTTTG	3981	False	NA	-4	True	AATAAA	-24	NA	32872063	32862992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32863745_32864849_32864996_32865325_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
Isoform_100917_3	chr2	-	1861	11	NNC	ENSMUSG00000038860.16	novel	3678	28	NA	NA	907	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	27.2036762221579	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTGCAACCCTTCTCA	NA	False	NA	-9	True	AATAAA	-19	NA	32897433	32876384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893954_32895060_32895240_32896809_32896927_32897260
Isoform_100919_125	chr2	-	3608	30	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	18.462418040573	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCAACCCTTCTCAT	NA	False	NA	-8	True	AATAAA	-20	NA	33020614	32876383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_10092_5	chr10	-	169	1	Intergenic	novelGene_1089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAGA	8451	False	NA	NA	False	NA	NA	NA	82762678	82762509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_82762500_82762700
Isoform_100920_28	chr2	-	3757	30	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	18.462418040573	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTACTGCCTGTTCACT	NA	False	NA	NA	False	TATAAA	-19	NA	33020614	32876234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_100922_5	chr2	-	3449	29	NIC	ENSMUSG00000038860.16	novel	3578	29	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_28	24.7232642650271	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCAACCCTTCTCAT	NA	False	NA	-8	True	AATAAA	-20	NA	33020626	32876383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_33020435
Isoform_100923_7	chr2	-	3738	31	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	28.3486429226437	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGCAACCCTTCTC	NA	False	NA	-10	True	AATAAA	-18	NA	33020656	32876385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32918260_32918351_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_100924_3	chr2	-	1589	9	ISM	ENSMUSG00000038860.16	ENSMUST00000049618.9	3678	28	78922	3901	884	-3901	internal_fragment	FALSE	canonical	3	73	junction_3	8.20727573558973	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAATGACAT	NA	False	NA	NA	False	NA	NA	NA	32897456	32880286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260
Isoform_100925_30	chr2	-	3346	28	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-29	-3901	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	18.5239251366749	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAATGACAT	NA	False	NA	NA	False	NA	NA	NA	33020649	32880286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_100927_14	chr2	-	2273	13	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-29	-5791	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	11.9953694769644	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGGCCTGGGCCTGTG	NA	False	NA	NA	False	TATAAA	-32	NA	33020649	32915111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_100928_5	chr2	-	2781	13	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	1	-5253	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	11.9953694769644	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAGGAGGTTTTTAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	33020619	32914573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_10093_4	chr10	+	183	1	Intergenic	novelGene_737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAGAAAATAGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	12797643	12797826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_12797600_12797800
Isoform_100932_3	chr2	-	2725	20	NIC	ENSMUSG00000038831.17	novel	2738	20	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	11.3205620290576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGTGTCTTGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	33261480	33026984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036663_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
Isoform_100934_5	chr2	-	6075	18	NIC	ENSMUSG00000038831.17	novel	6035	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	9.43122987132713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTTCTATTTATTAG	NA	False	NA	NA	False	ATTAAA	-15	NA	33261488	33023432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036663_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
Isoform_100936_5	chr2	-	6289	20	FSM	ENSMUSG00000038831.17	ENSMUST00000091039.5	2738	20	2	-3553	2	1	multi-exon	FALSE	canonical	2	6	junction_8	10.7559170084433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCGTTCTATTTATTAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	33261488	33023431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
Isoform_100938_19	chr2	-	6091	18	FSM	ENSMUSG00000038831.17	ENSMUST00000131298.7	6035	18	-62	6	-5	-2	multi-exon	FALSE	canonical	3	17	junction_6	7.39259893617541	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATCGTTCTATTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	33261503	33023434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
Isoform_10094_5	chr10	+	169	1	Intergenic	novelGene_1090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTTTTAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	83124154	83124323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_83124200_83124300
Isoform_100940_13	chr2	-	6580	3	FSM	ENSMUSG00000068966.11	ENSMUST00000113158.8	6602	3	21	1	14	-1	multi-exon	FALSE	canonical	3	36	junction_2	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGTGGTCTCTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	33321315	33296120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33302508_33318112_33318233_33321242
Isoform_100941_9	chr2	-	2109	2	FSM	ENSMUSG00000068966.11	ENSMUST00000134589.2	664	2	-19	-1426	-12	1426	multi-exon	FALSE	canonical	3	85	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACATTCTCAAATTTG	NA	False	NA	NA	False	NA	NA	NA	33321348	33300504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33302508_33321242
Isoform_100942_120	chr2	-	6443	2	FSM	ENSMUSG00000068966.11	ENSMUST00000134589.2	664	2	29	-5808	29	-3	multi-exon	FALSE	canonical	3	85	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGCTGTGGTCTCTGT	NA	False	NA	-3	True	AATAAA	-44	NA	33321300	33296122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33302508_33321242
Isoform_100943_3	chr2	-	3859	2	FSM	ENSMUSG00000068966.11	ENSMUST00000134589.2	664	2	-26	-3169	-19	-2642	multi-exon	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCGTATTGTGATATC	NA	False	NA	NA	False	ATTAAA	-14	NA	33321355	33298761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33302508_33321242
Isoform_100944_52	chr2	-	5077	4	FSM	ENSMUSG00000026788.14	ENSMUST00000113156.2	1828	4	-19	-3230	8	-5	multi-exon	FALSE	canonical	3	37	junction_1	10.6770782520313	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTGTGTTGTTTTCA	NA	False	NA	-6	True	AATAAA	-20	NA	33358536	33340303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33345136_33352277_33352370_33354925_33354987_33358444
Isoform_10095_9	chr10	+	172	1	Intergenic	novelGene_1091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	83143815	83143987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_83143800_83144000
Isoform_100954_66	chr2	-	5015	3	FSM	ENSMUSG00000026788.14	ENSMUST00000028125.12	4998	3	-21	4	6	-4	multi-exon	FALSE	canonical	3	44	junction_1	8.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGTGTTGTTTTCAC	NA	False	NA	-5	True	AATAAA	-21	NA	33358565	33340302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33345136_33354925_33354987_33358444
Isoform_100959_35	chr2	-	5053	3	FSM	ENSMUSG00000026788.14	ENSMUST00000126442.2	487	3	31	-4597	4	-4	multi-exon	TRUE	canonical	3	37	junction_2	3.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGTGTTGTTTTCAC	NA	False	NA	-5	True	AATAAA	-21	NA	33358540	33340302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33345136_33354925_33355050_33358444
Isoform_10096_5	chr10	+	173	1	Intergenic	novelGene_1092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGATGTGCC	NA	False	NA	NA	False	NA	NA	NA	83155270	83155443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_83155300_83155400
Isoform_100963_17	chr2	-	4957	2	NIC	ENSMUSG00000026788.14	novel	4998	3	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGTTGTTTTCACTC	NA	False	NA	-3	True	AATAAA	-23	NA	33358566	33340300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_33345136_33358444
Isoform_100964_12	chr2	-	4513	10	FSM	ENSMUSG00000038740.10	ENSMUST00000041555.10	4998	10	485	0	21	0	multi-exon	FALSE	canonical	3	7	junction_2	24.5990063033268	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGTTTGCTGTTATTT	4234	False	NA	-1	True	AATAAA	-20	NA	33777473	33619964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33623544_33642320_33642381_33645001_33645058_33692756_33692852_33715059_33715183_33717693_33717824_33724548_33724646_33730170_33730279_33764349_33764473_33777331
Isoform_100966_25	chr2	-	510	3	FSM	ENSMUSG00000038740.10	ENSMUST00000146892.2	520	3	15	-5	15	5	multi-exon	FALSE	canonical	3	76	junction_1	8	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGTGTGTTTTGATGA	4228	False	NA	0	True	AATAAA	-20	NA	33777479	33763620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_33763860_33764349_33764473_33777331
Isoform_100967_17	chr2	-	1670	3	NNC	ENSMUSG00000087461.3	novel	2668	4	NA	NA	80960	-904	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	1	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTGTTTACCCTCAAG	NA	False	NA	NA	False	NA	NA	NA	33916781	33909204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_33910509_33915810_33915970_33916574
Isoform_100969_13	chr2	-	3525	9	FSM	ENSMUSG00000038718.16	ENSMUST00000040638.15	2587	9	-672	-266	426	0	multi-exon	FALSE	canonical	3	23	junction_3	7.22733526273688	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATGTGTGTCTCTGT	160	False	NA	NA	False	AATAAA	-24	NA	34262728	34061468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
Isoform_100972_3	chr2	-	2534	8	FSM	ENSMUSG00000038718.16	ENSMUST00000153278.8	1063	8	-49	-1422	-49	-2	multi-exon	FALSE	canonical	1	7	junction_6	10.7285619174392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGCCATGTGTGTCTCT	907	False	NA	NA	False	AATAAA	-22	NA	34261981	34061470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34260835_34260910_34261732
Isoform_100979_62	chr2	-	6408	26	FSM	ENSMUSG00000026867.20	ENSMUST00000113099.10	5758	26	154	-804	4	3	multi-exon	FALSE	canonical	2	81	junction_18	31.5772069695849	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCAGGGCTCTTTTCTG	5934	False	NA	-4	True	AATAAA	-18	NA	34644419	34566192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
Isoform_10098_4	chr10	+	763	2	NNC	ENSMUSG00000020255.9	novel	123179	4	NA	NA	29	-127469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83196113	83196900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_83196269_83196292
Isoform_100984_10	chr2	-	5582	26	FSM	ENSMUSG00000026867.20	ENSMUST00000028224.15	5695	26	113	0	-23	0	multi-exon	FALSE	canonical	2	111	junction_18	27.1558465159899	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	5893	False	NA	NA	False	NA	NA	NA	34644460	34566996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
Isoform_100985_67	chr2	-	6360	26	FSM	ENSMUSG00000026867.20	ENSMUST00000028224.15	5695	26	136	-801	0	0	multi-exon	FALSE	canonical	2	111	junction_18	27.1558465159899	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTGCAGGGCTCTTTT	5916	False	NA	-7	True	AATAAA	-15	NA	34644437	34566195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
Isoform_100996_67	chr2	-	1171	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	131.97928099609	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2770	False	NA	-22	True	AATAAA	-17	NA	34689791	34669228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675738_34680514_34680668_34685183_34685342_34687386_34687446_34689762
Isoform_101000_23	chr2	-	1169	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	140.541227882404	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTGACTTTTTACAAAA	2778	False	NA	-23	True	AATAAA	-16	NA	34689783	34669229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687382_34687446_34689762
Isoform_101004_61	chr2	-	1463	8	FSM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	-12	-20	-12	0	multi-exon	FALSE	canonical	3	85	junction_7	117.809081109381	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2809	False	NA	-22	True	AATAAA	-17	NA	34689752	34669228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
Isoform_101007_321	chr2	-	1166	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	141	1661	-17	0	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2778	False	NA	-22	True	AATAAA	-17	NA	34689783	34669228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
Isoform_101009_21	chr2	-	2486	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	141	341	-17	-341	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTATGCTTCCATTAT	2778	False	NA	-5	True	AATAAA	-13	NA	34689783	34667908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
Isoform_101012_12	chr2	-	2100	8	NIC	ENSMUSG00000035949.16	novel	1838	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	128.342971632057	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9217	False	NA	-3	True	ATTAAA	-15	NA	34716226	34695349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715691_34716083_34716183
Isoform_101015_83	chr2	-	1820	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	19	-1	1	0	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9215	False	NA	-3	True	ATTAAA	-15	NA	34716228	34695349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
Isoform_101023_14	chr2	-	1974	7	FSM	ENSMUSG00000035949.16	ENSMUST00000028220.10	2030	7	-104	160	-10	0	multi-exon	FALSE	canonical	3	260	junction_4	71.5238887831658	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9254	False	NA	-3	True	ATTAAA	-15	NA	34716189	34695349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973
Isoform_101024_139	chr2	-	1902	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	24	-3	1	0	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9225	False	NA	-3	True	ATTAAA	-15	NA	34716218	34695349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_101026_8	chr2	-	3096	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	13	-1186	0	359	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCAGTTCAACCCTCAT	9214	False	NA	NA	False	TTTAAA	-4	NA	34716229	34694166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_101031_8	chr2	-	3062	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	32	-1171	3	344	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTTTAAAAAAAAATT	9233	False	NA	NA	False	NA	NA	NA	34716210	34694181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_101037_13	chr2	-	2398	4	ISM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	35	5829	1	671	5prime_fragment	FALSE	canonical	3	82	junction_2	161.085898410341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGCAGTGACAGTGAAG	9231	False	NA	-7	True	AATAAA	-17	NA	34716212	34701179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_34703022_34712569_34712988_34715973_34716083_34716183
Isoform_101041_87	chr2	-	2487	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	113	-670	3	670	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGCAGTGACAGTGAA	9233	False	NA	-8	True	AATAAA	-16	NA	34716210	34701180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_101045_15	chr2	-	827	2	FSM	ENSMUSG00000035949.16	ENSMUST00000126051.2	852	2	14	11	0	-11	multi-exon	FALSE	canonical	3	239	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAATAAAACAAAA	9230	False	NA	NA	False	NA	NA	NA	34716213	34715285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34716083_34716183
Isoform_101046_1058	chr2	-	2018	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	23	2356	-6	12	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCCGGCTGTGTGTCAC	NA	False	NA	-2	True	AATAAA	-26	NA	34760951	34742101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
Isoform_101049_17	chr2	-	3421	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	25	951	-4	-951	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCTTTTGTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	34760949	34740696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
Isoform_10105_5	chr10	-	178	1	Intergenic	novelGene_1093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTAAGGGGGCATC	6512	False	NA	NA	False	NA	NA	NA	83527623	83527445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_83527400_83527600
Isoform_101051_92	chr2	-	1873	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	14	combination_of_known_splicesites	FALSE	canonical	3	104	junction_8	158.265945089271	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGGCTGTGTGTCACTG	NA	False	NA	0	True	AATAAA	-28	NA	34760949	34742099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34760761
Isoform_101056_3	chr2	-	2236	15	FSM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	-231	1736	-181	-1709	multi-exon	FALSE	canonical	3	18	junction_3	4.03871569806491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTATTGGTTCCTCTGA	3456	False	NA	NA	False	NA	NA	NA	34804219	34785504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
Isoform_101057_29	chr2	-	3793	15	FSM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	-48	-4	2	4	multi-exon	FALSE	canonical	3	18	junction_3	4.03871569806491	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGTCCTTGGAGCTGGC	3639	False	NA	-13	True	ATTAAA	-32	NA	34804036	34783764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
Isoform_101058_8	chr2	-	3950	15	FSM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	-205	-4	-155	4	multi-exon	FALSE	canonical	3	18	junction_3	4.03871569806491	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGTCCTTGGAGCTGGC	3482	False	NA	-13	True	ATTAAA	-32	NA	34804193	34783764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
Isoform_10106_4	chr10	-	158	1	Intergenic	novelGene_1094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAACAAAACAAGAAG	NA	False	NA	NA	False	NA	NA	NA	83918228	83918070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_83918100_83918200
Isoform_101060_4	chr2	-	2118	11	FSM	ENSMUSG00000026875.15	ENSMUST00000113064.8	2325	11	150	57	-25	-57	multi-exon	FALSE	canonical	1	1	junction_10	3.16385840391127	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGAGATCTTTGATGTT	NA	False	NA	NA	False	NA	NA	NA	34851634	34833326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524_34848624_34849486_34849526_34850832_34850900_34851535
Isoform_101061_9	chr2	-	2139	11	FSM	ENSMUSG00000026875.15	ENSMUST00000113064.8	2325	11	185	1	-2	-1	multi-exon	FALSE	canonical	1	1	junction_10	3.16385840391127	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTTCAGGTGTGAGACC	NA	False	NA	NA	False	AAAACA	-22	NA	34851599	34833270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524_34848624_34849486_34849526_34850832_34850900_34851535
Isoform_101067_462	chr2	-	2988	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	86	7	-52	-7	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAACATAGTTGCATTA	9638	False	NA	NA	False	AATAAA	-19	NA	35091046	35070223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
Isoform_101070_1022	chr2	-	2937	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	143	1	-1	-1	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTTGCATTATTTTTG	9695	False	NA	NA	False	AATAAA	-25	NA	35090989	35070217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
Isoform_10108_6	chr10	+	186	1	Intergenic	novelGene_738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	12840626	12840812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_12840600_12840800
Isoform_101095_106	chr2	-	2810	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	-22	-1	-22	1	multi-exon	FALSE	canonical	3	37	junction_2	5.5876848714134	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGAGTCTTGTTTCTG	NA	False	NA	1	True	AATAAA	-21	NA	35227010	35203996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
Isoform_101097_9	chr2	-	3429	9	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	62	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	26.2678510731274	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	1227	False	NA	-1	True	AATAAA	-15	NA	35335783	35290192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35335707
Isoform_101099_23	chr2	-	3412	9	FSM	ENSMUSG00000035778.18	ENSMUST00000102794.8	3606	9	196	-2	-4	-2	multi-exon	FALSE	canonical	3	26	junction_8	26.0836994117016	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35351265	35290192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
Isoform_10110_3	chr10	-	1841	1	Genic_Genomic	ENSMUSG00000020032.15	novel	NA	NA	NA	NA	19646	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTGTTTCGTTGGTTG	NA	False	NA	NA	False	AATAAA	-19	NA	84208606	84206765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_84206800_84208600
Isoform_101100_6	chr2	-	3478	9	FSM	ENSMUSG00000035778.18	ENSMUST00000102794.8	3606	9	127	1	-56	-1	multi-exon	FALSE	canonical	3	26	junction_8	26.0836994117016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATTCTGGTCTGGTATG	NA	False	NA	-4	True	AATAAA	-12	NA	35351334	35290195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
Isoform_101103_7	chr2	-	3480	9	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	759	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	26.4548554144603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35352484	35290193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_101104_5	chr2	-	3835	9	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	404	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	26.4548554144603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35352839	35290193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_101105_3	chr2	-	3579	9	NNC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	-1159	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	29.7885779284611	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35354402	35290192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35354176
Isoform_101106_29	chr2	-	3406	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	49	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	27.4531140198659	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	1214	False	NA	-1	True	AATAAA	-15	NA	35335796	35290192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35335707
Isoform_101107_6	chr2	-	3356	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	0	-97	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	27.4531140198659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTAATGAGTAAGCTTAG	1165	False	NA	-100	True	AATAAA	-18	NA	35335845	35290291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35335707
Isoform_101108_32	chr2	-	3376	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	13	2	-4	-2	multi-exon	FALSE	canonical	3	26	junction_7	27.2381784880513	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35351265	35290192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
Isoform_101110_3	chr2	-	3512	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	-125	4	58	0	multi-exon	FALSE	canonical	3	26	junction_7	27.2381784880513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35351403	35290194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
Isoform_101111_8	chr2	-	3571	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	633	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	27.6708053621096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35352610	35290192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_101113_18	chr2	-	3443	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	760	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	27.6708053621096	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35352483	35290193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_101114_3	chr2	-	3803	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	400	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	27.6708053621096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35352843	35290193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_101115_5	chr2	-	3538	8	NNC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	-1154	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	31.4798283323899	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35354397	35290192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35354176
Isoform_101116_4	chr2	-	3353	8	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	33.8797392949515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	1235	False	NA	-3	True	AATAAA	-13	NA	35335775	35290194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35335707
Isoform_101117_4	chr2	-	3347	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113001.9	3340	8	-6	-1	-6	1	multi-exon	FALSE	canonical	3	6	junction_3	33.733045628092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35351267	35290193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
Isoform_101118_3	chr2	-	3408	8	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	762	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	34.0293990543471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATTCTGGTCTGGTAT	NA	False	NA	-5	True	AATAAA	-11	NA	35352481	35290196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_101120_3	chr2	-	3213	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	75	-99	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	32.273139846559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCTAATGAGTAAGCTT	1240	False	NA	-102	True	AATAAA	-16	NA	35335770	35290293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35335707
Isoform_101121_18	chr2	-	3308	7	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_3	32.0646049233246	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35351265	35290194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35351206
Isoform_101122_8	chr2	-	3374	7	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	762	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	32.4846117415616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35352481	35290194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_101126_7	chr2	-	3744	7	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	392	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	32.4846117415616	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35352851	35290194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_101127_4	chr2	-	3469	7	NNC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	-1153	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	36.2234577158074	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35354396	35290194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35354176
Isoform_101129_687	chr2	-	763	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	91	7	91	-7	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACAGTTGTGTTTTA	NA	False	NA	-8	True	ATTAAA	-8	NA	35939327	35926344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
Isoform_101132_6	chr2	-	2522	4	ISM	ENSMUSG00000026890.20	ENSMUST00000112961.10	3292	9	12615	6	2828	-5	3prime_fragment	FALSE	canonical	1	1	junction_2	6.37704215656966	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAGAATGCCATGGAAT	NA	False	NA	NA	False	AATAAA	-34	NA	35981457	35971970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331
Isoform_101133_10	chr2	-	2375	3	ISM	ENSMUSG00000026890.20	ENSMUST00000136821.9	825	5	2870	-1724	2870	-6	3prime_fragment	FALSE	canonical	3	7	junction_1	4	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAGAATGCCATGGAA	NA	False	NA	NA	False	AATAAA	-33	NA	35981415	35971971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_35974088_35980973_35981149_35981331
Isoform_101134_468	chr2	-	2433	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	184	0	-13	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	-23	True	AATAAA	-16	NA	36026601	36006090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
Isoform_101139_7	chr2	-	1267	3	ISM	ENSMUSG00000026889.13	ENSMUST00000134668.2	714	6	31	8449	-8	3	5prime_fragment	FALSE	canonical	3	277	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36026596	36016228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_36017264_36024146_36024276_36026493
Isoform_101141_5	chr2	-	3122	4	FSM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	446	-512	382	-2	multi-exon	FALSE	canonical	2	7	junction_3	79.6366749682582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCTGTATATTAGATAT	NA	False	NA	-9	True	AATAAA	-18	NA	37248819	37240087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37248363
Isoform_101143_278	chr2	-	2765	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	92	1	13	-1	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTGTATATTAGATATT	NA	False	NA	-8	True	AATAAA	-19	NA	37249252	37240086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
Isoform_101147_4	chr2	-	1965	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	44	849	-35	-335	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTAATTCTGCCACCT	NA	False	NA	NA	False	AATAAA	-18	NA	37249300	37240934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
Isoform_101150_14	chr2	-	9053	22	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-90	0	intron_retention	FALSE	canonical	0	0	junction_20	11.6766720944717	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTTTTCTTAGTGT	NA	False	NA	-4	True	AATAAA	-17	NA	37313005	37260084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
Isoform_101152_4	chr2	-	9019	22	FSM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-75	4	-75	0	multi-exon	TRUE	canonical	0	0	junction_20	12.7563953992798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTTTTCTTAGTGT	NA	False	NA	-4	True	AATAAA	-17	NA	37312990	37260084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37265441_37266672_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
Isoform_101153_5	chr2	-	4013	9	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-88	-222	intron_retention	FALSE	canonical	0	0	junction_7	16.2538456987877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCGTAAATATCTGTATT	NA	False	NA	NA	False	NA	NA	NA	37313003	37287124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
Isoform_101155_15	chr2	-	4465	2	FSM	ENSMUSG00000066798.4	ENSMUST00000053098.6	4535	2	67	3	67	0	multi-exon	FALSE	canonical	3	19	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGGGCTTGTGTATT	NA	False	NA	-1	True	AATAAA	-18	NA	37320864	37315514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37319936_37320820
Isoform_101158_3	chr2	-	5021	3	FSM	ENSMUSG00000066798.4	ENSMUST00000112932.2	5077	3	56	0	56	0	multi-exon	FALSE	canonical	0	0	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGGGCTTGTGTATT	NA	False	NA	-1	True	AATAAA	-18	NA	37333127	37315514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37319936_37320820_37320992_37332698
Isoform_101159_3	chr2	-	4618	3	NNC	ENSMUSG00000066798.4	novel	5077	3	NA	NA	-468	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGGGCTTGTGTATT	NA	False	NA	-1	True	AATAAA	-18	NA	37321399	37315514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_37319936_37320820_37320992_37321373
Isoform_101161_23	chr2	-	5314	2	FSM	ENSMUSG00000050714.10	ENSMUST00000067043.5	5267	2	-49	2	-35	-2	multi-exon	FALSE	canonical	3	22	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGGTGTCATTGACT	NA	False	NA	0	True	AATAAA	-12	NA	37333182	37322181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37327012_37332698
Isoform_101164_3	chr2	-	4897	2	FSM	ENSMUSG00000050714.10	ENSMUST00000102789.3	2047	2	-2	-2848	-1	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGGTGTCATTGACT	NA	False	NA	0	True	AATAAA	-12	NA	37333134	37322181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37327012_37333067
Isoform_101173_217	chr2	-	3213	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-69	0	4	0	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTTCTTGTGGCCT	NA	False	NA	-4	True	AATAAA	-14	NA	37593356	37473167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
Isoform_101175_337	chr2	-	2715	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-69	498	4	-498	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTGCCTGGTTCCTGA	NA	False	NA	-1	True	AATAAA	-19	NA	37593356	37473665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
Isoform_101178_151	chr2	-	2750	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-104	498	-31	-498	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTGCCTGGTTCCTGA	NA	False	NA	-1	True	AATAAA	-19	NA	37593391	37473665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
Isoform_101183_16	chr2	-	3252	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTTCTTGTGGCCT	NA	False	NA	-4	True	AATAAA	-14	NA	37593870	37473167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
Isoform_101184_29	chr2	-	2754	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	1	-498	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTGCCTGGTTCCTGA	NA	False	NA	-1	True	AATAAA	-19	NA	37593870	37473665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
Isoform_101192_7	chr2	-	4466	23	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-3	-10	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	20.1983961395842	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGACTGACCGTTT	NA	False	NA	-9	True	AATAAA	-8	NA	38177392	37689012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_37691263_37692026_37692286_37695083_37695213_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
Isoform_101193_76	chr2	-	4333	22	FSM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	9	0	-8	0	multi-exon	FALSE	canonical	3	52	junction_2	9.9979589753844	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACCGTTTAAGAAAACAT	NA	False	NA	1	True	AATAAA	-18	NA	38177378	37689002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
Isoform_101195_4	chr2	-	4272	22	FSM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	-13	83	2	-83	multi-exon	FALSE	canonical	3	52	junction_2	9.9979589753844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTTGCTTTTCCTTTTT	NA	False	NA	-29	True	AATGAA	-21	NA	38177400	37689085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
Isoform_101196_8	chr2	-	4299	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	17.917868176767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACCGTTTAAGAAAAC	NA	False	NA	-1	True	AATAAA	-16	NA	38177390	37689004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38133413_38133485_38177124
Isoform_101197_4	chr2	-	4278	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	14.3993055388099	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACTGACCGTTTAAGAA	NA	False	NA	-4	True	AATAAA	-13	NA	38177378	37689007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38049818_38049863_38133413_38133485_38177124
Isoform_101198_14	chr2	-	4180	20	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	18.3463145513678	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACCGTTTAAGAAAAC	NA	False	NA	-1	True	AATAAA	-16	NA	38177397	37689004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38049818_38049863_38133413_38133485_38177124
Isoform_101199_5	chr2	-	2328	21	NIC	ENSMUSG00000035392.18	novel	1794	19	NA	NA	5	-3634	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	16.5899819168075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCGTCTCTGCTGA	NA	False	NA	NA	False	NA	NA	NA	38177397	37694717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_37695213_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
Isoform_101206_2086	chr2	-	959	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	171	30	4	-30	multi-exon	FALSE	canonical	3	1531	junction_5	118.933011500129	2086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAAAAGAC	2384	False	NA	-48	True	AAAACA	-24	NA	38533928	38478077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
Isoform_101211_39	chr2	-	6124	11	FSM	ENSMUSG00000063972.14	ENSMUST00000076275.11	5941	11	-183	0	-125	0	multi-exon	FALSE	canonical	3	61	junction_5	17.3677862722916	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATCTGTCTGTGAAG	NA	False	NA	-6	True	AATAAA	-16	NA	38816412	38613385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
Isoform_101214_25	chr2	-	6121	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	22.851914580621	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATCTGTCTGTGAAG	NA	False	NA	-6	True	AATAAA	-16	NA	38816412	38613385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
Isoform_101219_8253	chr2	-	446	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	499	1	-3	-1	multi-exon	FALSE	canonical	3	27807	junction_3	5721.16085733967	8253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895137	38891592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
Isoform_10122_20	chr10	-	161	1	Intergenic	novelGene_1095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAATAATTTTTA	9804	False	NA	NA	False	NA	NA	NA	84388857	84388696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_84388700_84388900
Isoform_101229_4	chr2	-	4462	23	FSM	ENSMUSG00000026754.17	ENSMUST00000039165.15	4869	23	58	349	2	-1	multi-exon	FALSE	canonical	3	9	junction_22	11.0304799353113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAGTGAGTTTTACTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	38955495	38906515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
Isoform_101230_15	chr2	-	4480	23	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-3	0	intron_retention	FALSE	canonical	3	23	junction_1	8.80974291610907	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955556	38906514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
Isoform_101236_129	chr2	-	1569	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	102	2444	-29	-21	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTCCTTGTTGTGTTTT	NA	False	NA	-16	True	AATAAA	-15	NA	39116361	39086809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_101237_219	chr2	-	3949	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	150	16	-19	-16	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGTGAAAAATAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	39116313	39084381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_101238_22	chr2	-	4078	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	30	7	30	-7	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTTTATCTCATGC	NA	False	NA	NA	False	AATAAA	-22	NA	39116433	39084372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_10124_65	chr10	-	178	1	Intergenic	novelGene_1096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACAGTTCT	4209	False	NA	NA	False	NA	NA	NA	84523502	84523324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_84523300_84523500
Isoform_101245_21	chr2	-	4114	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	-15	16	-15	-16	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGTGAAAAATAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	39116478	39084381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_101247_25	chr2	-	2596	11	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	-46	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_10	9.30644937664198	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGCGTCTAAGTGTG	NA	False	NA	-3	True	AATAAA	-28	NA	44817322	44454423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817153
Isoform_101248_97	chr2	-	2522	11	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	3	29	junction_10	9.30644937664198	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCATATTCATTTGCGT	NA	False	NA	-12	True	AATAAA	-19	NA	44817257	44454432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817153
Isoform_101249_3	chr2	-	2480	11	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	16.2061716639063	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCATATTCATTTGCGT	NA	False	NA	-12	True	AATAAA	-19	NA	44817678	44454432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817616
Isoform_101250_7	chr2	-	2507	10	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	17.0619785227596	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCATATTCATTTGCGT	NA	False	NA	-12	True	AATAAA	-19	NA	44817278	44454432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44817153
Isoform_101251_7	chr2	-	1606	14	FSM	ENSMUSG00000026761.13	ENSMUST00000154784.8	1477	14	-8	-121	2	121	multi-exon	FALSE	canonical	3	68	junction_4	114.388107132055	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGATTTGATACTCTT	NA	False	NA	-28	True	AATAAA	-26	NA	48839251	48795206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_101253_19	chr2	-	1608	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-8	110	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	120.796175338176	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839261	48795217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_101256_8	chr2	-	1677	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-1	123	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	125.016069972941	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATTTGATACTCTTTT	NA	False	NA	-26	True	AATAAA	-28	NA	48839245	48795204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839105
Isoform_101257_51	chr2	-	4028	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	38	0	3	0	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839250	48792835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_10126_3	chr10	+	175	1	Intergenic	novelGene_1097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGAAAGACTAGTA	6424	False	NA	NA	False	NA	NA	NA	84605952	84606127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_84606000_84606100
Isoform_101260_305	chr2	-	1647	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	36	2383	1	109	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48839252	48795218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_101267_9	chr2	-	4802	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	3	117	intron_retention	FALSE	canonical	3	352	junction_6	46.5259784063341	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATAAAATGATTTGATAC	NA	False	NA	-32	True	AATAAA	-22	NA	48839250	48795210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_101268_9	chr2	-	1503	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	7	110	combination_of_known_splicesites	FALSE	canonical	2	12	junction_5	129.679171419315	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839281	48795217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_10127_39	chr10	+	174	1	Intergenic	novelGene_1098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	84719299	84719473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_84719300_84719500
Isoform_101272_17	chr2	-	1164	7	FSM	ENSMUSG00000026761.13	ENSMUST00000090976.10	1153	7	-6	-5	1	5	multi-exon	FALSE	canonical	3	33	junction_1	170.808290847436	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTTTGGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	48839252	48821964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_48822610_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_101273_10	chr2	-	1416	9	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	256.06270594329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186719	50169894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_50170415_50170584_50170671_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
Isoform_101276_10	chr2	-	1589	7	NIC	ENSMUSG00000026766.17	novel	803	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	58	junction_6	217.804193409279	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186699	50169893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182911_50186263
Isoform_101277_41	chr2	-	1290	8	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_6	203.005881085012	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186733	50169893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182911_50186263_50186322_50186654
Isoform_101278_12	chr2	-	1602	7	ISM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	2	-468	2	-1	intron_retention	FALSE	canonical	3	69	junction_6	213.816445163187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186697	50169893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263
Isoform_101279_38	chr2	-	1297	8	FSM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	-26	-468	4	-1	multi-exon	FALSE	canonical	3	69	junction_6	199.415574689068	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186725	50169893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263_50186322_50186654
Isoform_10128_3	chr10	+	328	1	Intergenic	novelGene_1099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCAGC	NA	False	NA	NA	False	NA	NA	NA	84821466	84821794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_84821500_84821800
Isoform_101281_161	chr2	-	1642	7	ISM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	32	1	2	-1	intron_retention	FALSE	canonical	3	533	junction_6	61.03664655125	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186697	50169893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263
Isoform_101283_185	chr2	-	1331	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	10	1	10	-1	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186719	50169893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
Isoform_101284_185	chr2	-	1309	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	32	1	2	-1	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186697	50169893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
Isoform_101288_18	chr2	-	1310	8	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	208.37515226541	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186733	50169893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186689
Isoform_101293_1633	chr2	-	2822	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	6	0	5	0	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGATGTTTTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	51039117	51020449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
Isoform_101294_69	chr2	-	2898	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	-70	0	-70	0	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGATGTTTTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	51039193	51020449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
Isoform_101301_3	chr2	-	2207	5	FSM	ENSMUSG00000036249.17	ENSMUST00000102767.8	2057	5	-161	11	-5	-8	multi-exon	FALSE	canonical	3	26	junction_1	2.77263412660235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATTAAACTGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	51825180	51814470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824843
Isoform_101302_12	chr2	-	2034	5	FSM	ENSMUSG00000036249.17	ENSMUST00000102767.8	2057	5	14	9	14	-6	multi-exon	FALSE	canonical	3	26	junction_1	2.77263412660235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAACTGTGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	51825005	51814468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824843
Isoform_101303_182	chr2	-	5182	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	57	0	57	0	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTTGGGGGTTTTTG	4812	False	NA	-3	True	AATAAA	-22	NA	52314856	52287962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
Isoform_10131_10	chr10	+	171	1	Intergenic	novelGene_1100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	84908360	84908531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_84908400_84908500
Isoform_101322_101	chr2	-	5235	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	3	1	3	-1	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTTGGGGGTTTTT	4758	False	NA	-4	True	AATAAA	-21	NA	52314910	52287963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
Isoform_101325_21	chr2	-	5054	5	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	35	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	166.191719107782	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATTCTTGGGGGTTTT	4790	False	NA	-5	True	AATAAA	-20	NA	52314878	52287964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_52292445_52294917_52295070_52302073_52302158_52306647_52306709_52314601
Isoform_101332_10	chr2	-	3386	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-8	1339	-8	-1339	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTTTGTGTAGAGGAAT	NA	False	NA	NA	False	AATAAA	-26	NA	52632220	52583014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
Isoform_101334_12	chr2	-	3230	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-211	1698	-130	-1698	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAATCTTATCGTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	52632423	52583373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
Isoform_101335_9	chr2	-	4696	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	23	-2	3	2	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATTTGAGAGATGTT	NA	False	NA	NA	False	TATAAA	-14	NA	52632189	52581673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
Isoform_10134_48	chr10	+	221	1	Intergenic	novelGene_1101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGAGAATATTGCAATCA	NA	False	NA	NA	False	AAGAAA	-31	NA	84993603	84993824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_84993600_84993800
Isoform_101341_61	chr2	-	4835	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-40	-1230	-2	993	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGATTTCTGTGCTTCT	NA	False	NA	-29	True	AATAAA	-29	NA	53081239	53027256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
Isoform_101345_72	chr2	-	5214	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-13	-1636	4	1399	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATTGTCTTGTTTTGAT	NA	False	NA	1	True	TATAAA	-19	NA	53081212	53026850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
Isoform_101346_24	chr2	-	5262	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-67	-1630	-4	1393	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACTCTATTGTCTTGT	NA	False	NA	-5	True	TATAAA	-13	NA	53081266	53026856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
Isoform_101355_14	chr2	-	5137	26	FSM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	30	-1394	-4	1394	multi-exon	FALSE	canonical	3	232	junction_25	95.4321874421833	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTCTATTGTCTTGTT	NA	False	NA	-4	True	TATAAA	-14	NA	53081266	53026855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
Isoform_101360_46	chr2	-	5113	26	FSM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	57	-1397	-2	1397	multi-exon	FALSE	canonical	3	232	junction_25	95.4321874421833	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTATTGTCTTGTTTTG	NA	False	NA	-1	True	TATAAA	-17	NA	53081239	53026852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
Isoform_101362_15	chr2	-	4739	26	FSM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	30	-996	-4	996	multi-exon	FALSE	canonical	3	232	junction_25	95.4321874421833	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTCTGTGCTTCTTAT	NA	False	NA	-26	True	AATAAA	-32	NA	53081266	53027253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
Isoform_101364_25	chr2	-	2812	26	FSM	ENSMUSG00000061136.17	ENSMUST00000209364.3	3251	26	448	-9	-4	3	multi-exon	FALSE	canonical	3	232	junction_25	95.4321874421833	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATGTTTATAGTATGA	NA	False	NA	-30	True	AATAAA	-9	NA	53081266	53029180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
Isoform_10137_6	chr10	-	320	1	Intergenic	novelGene_1102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	85379126	85378806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_85378800_85379100
Isoform_10138_10	chr10	-	175	1	Intergenic	novelGene_1103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGAAGCAAGCGGGTCT	NA	False	NA	NA	False	NA	NA	NA	85379127	85378952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_85379000_85379100
Isoform_101382_4	chr2	-	3552	8	FSM	ENSMUSG00000026826.14	ENSMUST00000112629.8	3422	8	-136	6	-136	-6	multi-exon	TRUE	canonical	1	2	junction_5	1.27775312999988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAACTCTGTCTTATTTC	NA	False	NA	NA	False	AATAAA	-13	NA	57014151	56996847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_56998425_56998572_56998752_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57013840
Isoform_101386_26	chr2	-	3433	12	FSM	ENSMUSG00000026836.16	ENSMUST00000112601.9	3050	12	-383	0	-54	0	multi-exon	FALSE	canonical	3	10	junction_10	14.1281034036818	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	58457223	58336452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58406035_58406313_58427789_58427886_58456798
Isoform_101388_19	chr2	-	3156	11	FSM	ENSMUSG00000026836.16	ENSMUST00000056376.12	2394	11	-54	-708	-54	0	multi-exon	FALSE	canonical	3	23	junction_9	11.677328461596	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	58457223	58336452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58427789_58427886_58456798
Isoform_101389_6	chr2	-	3279	11	FSM	ENSMUSG00000026836.16	ENSMUST00000056376.12	2394	11	-176	-709	-176	1	multi-exon	FALSE	canonical	3	23	junction_9	11.677328461596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGATTTTCCTTCTTT	NA	False	NA	-4	True	AATAAA	-15	NA	58457345	58336451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58427789_58427886_58456798
Isoform_10139_485	chr10	+	735	1	FSM	ENSMUSG00000078348.5	ENSMUST00000105139.5	3841	1	3106	0	3106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTATGGATTGCTG	NA	False	NA	23	True	TATAAA	-18	NA	12884192	12884927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_12884200_12884900
Isoform_101391_9	chr2	-	2069	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	3	4	junction_10	23.1810267244572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	0	True	AATAAA	-20	NA	59712944	59682707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708876_59712744
Isoform_101392_7	chr2	-	2069	11	FSM	ENSMUSG00000026988.16	ENSMUST00000028368.14	2072	11	1	2	1	-2	multi-exon	FALSE	canonical	3	14	junction_10	21.0228447171167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712927	59682709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
Isoform_101394_10	chr2	-	2000	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	17.6150503831241	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712935	59682709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
Isoform_101395_4	chr2	-	2023	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	20.6164982477626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712921	59682709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712821
Isoform_101396_9	chr2	-	2078	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-19	-4	combination_of_known_junctions	FALSE	canonical	3	4	junction_10	21.0570653225942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGCAATGCCTAAGTG	NA	False	NA	-4	True	AATAAA	-16	NA	59712954	59682711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708876_59712744
Isoform_101398_13	chr2	-	2066	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	18.5580171354593	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712921	59682709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
Isoform_101399_10	chr2	-	1975	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	14.3488675511345	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712907	59682709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
Isoform_10140_844	chr10	+	696	1	FSM	ENSMUSG00000078348.5	ENSMUST00000105139.5	3841	1	3145	0	3145	0	mono-exon	FALSE	NA	NA	NA	NA	NA	844	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTATGGATTGCTG	NA	False	NA	23	True	TATAAA	-18	NA	12884231	12884927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_12884200_12884900
Isoform_101400_6	chr2	-	2130	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	19.790149064623	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712948	59682709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712744
Isoform_101402_18	chr2	-	2053	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	18.0765040867973	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712948	59682709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712821
Isoform_101421_3	chr2	-	7973	37	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	38	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_35	50.4306454450069	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACATTCTTTTTTTTTTA	NA	False	NA	-8	True	AATAAA	-15	NA	59956003	59729710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
Isoform_101422_6	chr2	-	7827	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39422	2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_32	41.9515172063939	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTTTTTTAGGGGTG	1592	False	NA	-2	True	AATAAA	-21	NA	59880992	59729704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_101423_3	chr2	-	7787	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_34	49.9180880062937	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	NA	False	NA	-4	True	AATAAA	-19	NA	59956002	59729706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59907213_59907256_59955806
Isoform_101424_6	chr2	-	7653	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_32	40.7527038608767	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	1573	False	NA	-6	True	AATAAA	-17	NA	59881011	59729708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
Isoform_101426_6	chr2	-	7563	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-2	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_31	39.5207448481984	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	1573	False	NA	-6	True	AATAAA	-17	NA	59881011	59729708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_101427_12	chr2	-	7375	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-1	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_26	37.8594859912611	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTTTTTTTTTTAGGG	1573	False	NA	-5	True	AATAAA	-18	NA	59881011	59729707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
Isoform_101429_4	chr2	-	7344	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39428	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_31	39.6342785106258	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTTTTTTTTTTAGGG	1598	False	NA	-5	True	AATAAA	-18	NA	59880986	59729707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
Isoform_101431_6	chr2	-	2947	16	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-11963	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_12	34.6288255006657	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCTTAATATAATTC	1573	False	NA	0	True	NA	NA	NA	59881011	59767028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_101432_9	chr2	-	2758	15	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-11963	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_12	33.1397781821059	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCTTAATATAATTC	1573	False	NA	0	True	NA	NA	NA	59881011	59767028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
Isoform_101435_5	chr2	-	2502	14	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39374	-11963	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_6	32.3097068968958	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCTTAATATAATTC	1544	False	NA	0	True	NA	NA	NA	59881040	59767028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
Isoform_101436_14	chr2	-	2879	15	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	10699	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_11	35.8412742348191	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATGGCCGTGCGCTGGGC	1573	False	NA	NA	False	TATAAA	-7	NA	59881011	59773106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_101439_6	chr2	-	2665	14	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39422	10699	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_11	37.823163748903	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATGGCCGTGCGCTGGGC	1592	False	NA	NA	False	TATAAA	-7	NA	59880992	59773106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
Isoform_101440_6	chr2	-	2588	14	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	10693	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_10	35.5537762539672	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGTATGGCCGTGCG	1573	False	NA	NA	False	TATAAA	-1	NA	59881011	59773112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_101447_4	chr2	-	516	2	FSM	ENSMUSG00000026987.17	ENSMUST00000134908.2	406	2	-115	5	-24	-5	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTCCTTTAATTGAC	9088	False	NA	NA	False	AATAAA	-11	NA	60040207	60036942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_60037308_60040056
Isoform_101448_7	chr2	-	461	2	FSM	ENSMUSG00000026987.17	ENSMUST00000134908.2	406	2	-60	5	-7	-5	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTCCTTTAATTGAC	9143	False	NA	NA	False	AATAAA	-11	NA	60040152	60036942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_60037308_60040056
Isoform_101449_47	chr2	-	1016	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	338	0	268	0	multi-exon	FALSE	canonical	3	68	junction_2	6.41872261435249	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	4270	False	NA	-4	True	AATAAA	-15	NA	60114494	60082336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
Isoform_101452_3	chr2	-	3594	5	NIC	ENSMUSG00000060703.13	novel	1354	6	NA	NA	268	-1	intron_retention	FALSE	canonical	3	68	junction_1	7.08872343937891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCACTGCCTGGTCTTCT	4270	False	NA	-5	True	AATAAA	-14	NA	60114494	60082337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
Isoform_10146_46	chr10	+	185	1	Intergenic	novelGene_1104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGAGTTGCAC	NA	False	NA	NA	False	NA	NA	NA	85513961	85514146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_85514000_85514100
Isoform_10147_4	chr10	+	167	1	Intergenic	novelGene_1105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATACAGGAAAATA	NA	False	NA	NA	False	NA	NA	NA	85521580	85521747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_85521600_85521700
Isoform_10149_19	chr10	-	3612	1	Antisense	novelGene_ENSMUSG00000001785.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85716474	85712862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_85712900_85716500
Isoform_101501_161	chr2	-	6901	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-73	-1656	-1	-1	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213648	60122447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
Isoform_101503_713	chr2	-	6866	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-42	-1652	30	-5	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTTAATCTCCTTGG	NA	False	NA	-16	True	AATAAA	-15	NA	60213617	60122451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
Isoform_101504_16	chr2	-	6549	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-105	-1272	-33	-385	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGTTTCATATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	60213680	60122831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
Isoform_101513_16	chr2	-	2131	6	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-51	62491	21	-62491	5prime_fragment	FALSE	canonical	3	533	junction_4	45.5174691739336	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAACGAAAGTGCTTTCT	NA	False	NA	NA	False	GATAAA	-3	NA	60213626	60186594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
Isoform_101518_13	chr2	-	2309	15	FSM	ENSMUSG00000026970.17	ENSMUST00000164147.8	2543	15	-20	254	12	-254	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTAGTAGGTGTTTTT	NA	False	NA	-7	True	AATAAA	-26	NA	60711802	60582550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
Isoform_10152_18	chr10	-	165	1	Intergenic	novelGene_739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12887218	12887053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_12887100_12887200
Isoform_101527_26	chr2	-	2260	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	12	-255	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAGTAGGTGTTTT	NA	False	NA	-8	True	AATAAA	-25	NA	60711802	60582551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
Isoform_101528_5	chr2	-	4274	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTCCTGTCGGTTTTTT	NA	False	NA	-1	True	AATAAA	-16	NA	60711802	60580537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
Isoform_101540_81	chr2	-	3366	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	326	1576	-46	-1576	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCCATTTTTCAGAGGT	NA	False	NA	-20	True	AGTAAA	-3	NA	62242249	62161992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
Isoform_101547_39	chr2	-	3441	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	263	1564	53	-1564	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGTAATGGGTTATGT	NA	False	NA	-8	True	AGTAAA	-15	NA	62242312	62161980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
Isoform_101549_16	chr2	-	3698	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	9	1561	9	-1561	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAATGGGTTATGTCTT	NA	False	NA	-5	True	AGTAAA	-18	NA	62242566	62161977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
Isoform_10156_40	chr10	+	1700	1	Antisense	novelGene_ENSMUSG00000020048.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-13	NA	86536402	86538102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_86536400_86538100
Isoform_101563_25	chr2	-	1992	14	FSM	ENSMUSG00000026888.15	ENSMUST00000028252.14	1986	14	-14	8	-14	-8	multi-exon	FALSE	canonical	1	2	junction_8	3.05182068075037	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAGACTCGTGTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	64853140	64742827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_64743198_64745059_64745154_64747172_64747261_64747378_64747452_64747542_64747660_64753880_64753962_64760243_64760340_64760529_64760641_64763563_64763702_64766760_64766836_64768712_64768835_64783905_64784063_64851430_64851564_64852803
Isoform_101564_7	chr2	-	2959	11	FSM	ENSMUSG00000026994.10	ENSMUST00000028378.4	3885	11	258	668	258	652	multi-exon	FALSE	canonical	1	2	junction_3	1.86815416922694	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGGTTCTTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-27	NA	65955080	65913777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_65914637_65915580_65915734_65921238_65921341_65921505_65921638_65923874_65924076_65925544_65925663_65926133_65926369_65928056_65928207_65932788_65932962_65937193_65937817_65954867
Isoform_101565_11	chr2	-	4480	29	FSM	ENSMUSG00000034848.18	ENSMUST00000102718.10	4470	29	-13	3	-13	-3	multi-exon	TRUE	canonical	1	2	junction_7	6.12653562590721	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTGGTTTATATTTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	66086974	66014673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_66015188_66016497_66016566_66018603_66018725_66021902_66022128_66028011_66028208_66031466_66031629_66031816_66031968_66037795_66037878_66038997_66039109_66040335_66040525_66047528_66047636_66052997_66053137_66053858_66053970_66054419_66054493_66056249_66056489_66057074_66057297_66059325_66059484_66061632_66061763_66065386_66065588_66065916_66066015_66066564_66066758_66068130_66068230_66069866_66069952_66072974_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
Isoform_101566_3	chr2	-	2759	18	ISM	ENSMUSG00000034848.18	ENSMUST00000125446.3	4061	28	-37	37805	-12	-4433	5prime_fragment	FALSE	canonical	2	5	junction_10	6.52543599147925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTCCATTGTGTTATAA	NA	False	NA	NA	False	AATAAA	-22	NA	66086973	66052791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_66053137_66053858_66053970_66054419_66054493_66056249_66056489_66057074_66057297_66059325_66059484_66061632_66061763_66065386_66065588_66065916_66066015_66066564_66066758_66068130_66068230_66069866_66069952_66072974_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
Isoform_101567_6	chr2	-	1204	6	ISM	ENSMUSG00000034848.18	ENSMUST00000125446.3	4061	28	-7	57559	-7	-11086	5prime_fragment	FALSE	canonical	2	9	junction_3	7.79743547584717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGAATTGCATCAATA	NA	False	NA	NA	False	AATAAA	-21	NA	66086943	66072545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
Isoform_101568_12	chr2	-	3281	18	FSM	ENSMUSG00000027030.16	ENSMUST00000102715.4	3536	18	253	2	-75	1	multi-exon	FALSE	canonical	3	28	junction_11	9.06874933675377	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCGAGTCTCCTCCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	68302359	68040790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
Isoform_101569_8	chr2	-	2018	18	FSM	ENSMUSG00000027030.16	ENSMUST00000102715.4	3536	18	229	1289	-99	6	multi-exon	FALSE	canonical	3	28	junction_11	9.06874933675377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCCGAGTTCTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	68302383	68042077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
Isoform_101575_16	chr2	-	1539	7	FSM	ENSMUSG00000005233.17	ENSMUST00000112320.8	1527	7	-12	0	10	0	multi-exon	FALSE	canonical	3	49	junction_6	307.891214554751	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036491	69024238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
Isoform_101576_14	chr2	-	4332	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	-19	-2961	-19	2961	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAACTTGAAATTTTC	NA	False	NA	4	True	AATAAA	-20	NA	69036557	69021277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
Isoform_101577_17	chr2	-	4295	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	14	-2957	0	2957	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTCCCAACTTGAAAT	NA	False	NA	0	True	AATAAA	-16	NA	69036524	69021281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
Isoform_101578_204	chr2	-	1356	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	-6	2	-6	-1	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTTGTAACTCTCTCT	NA	False	NA	-12	True	NA	NA	NA	69036544	69024240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
Isoform_101579_452	chr2	-	1329	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	22	1	7	0	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTAACTCTCTCTT	NA	False	NA	-11	True	NA	NA	NA	69036516	69024239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
Isoform_101587_3	chr2	-	4414	25	FSM	ENSMUSG00000027070.15	ENSMUST00000100051.9	4359	25	-56	1	-20	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.25761568939888	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCTCATTAATATCTC	NA	False	NA	NA	False	AATAAA	-14	NA	69416429	69336548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69337101_69338108_69338226_69338311_69338432_69339476_69339723_69340686_69340969_69341273_69341412_69343590_69343722_69344480_69344607_69346734_69346928_69348652_69348857_69350257_69350399_69352062_69352266_69353489_69353697_69354264_69354489_69355504_69355675_69357859_69357989_69363796_69363917_69365252_69365403_69366328_69366446_69367858_69367973_69368294_69368406_69379283_69379401_69381173_69381297_69382696_69382805_69416158
Isoform_101588_211	chr2	-	3709	14	FSM	ENSMUSG00000027086.17	ENSMUST00000073152.13	2865	14	-865	21	27	-21	multi-exon	FALSE	canonical	0	0	junction_12	59.5439273976854	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	7100	False	NA	NA	False	NA	NA	NA	69543815	69517179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
Isoform_101589_5	chr2	-	4794	13	NIC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	8	-10	intron_retention	FALSE	canonical	0	0	junction_11	60.9445900433792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAATGACTATGGC	7063	False	NA	NA	False	NA	NA	NA	69543852	69517168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
Isoform_101591_379	chr2	-	940	7	FSM	ENSMUSG00000051730.16	ENSMUST00000060447.13	968	7	9	19	-2	1	multi-exon	FALSE	canonical	3	432	junction_3	75.5058864519111	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTACTTGTCTCTAG	6815	False	NA	-24	True	AATAAA	-15	NA	69715950	69701560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
Isoform_101593_36	chr2	-	877	6	FSM	ENSMUSG00000051730.16	ENSMUST00000142127.8	851	6	-7	-19	0	3	multi-exon	FALSE	canonical	3	48	junction_3	209.013492387453	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCTCTTTTCTTATG	6817	False	NA	-2	True	AATAAA	-37	NA	69715948	69701538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
Isoform_101594_9	chr2	-	877	6	NIC	ENSMUSG00000051730.16	novel	968	7	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	228.92933407495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTACTTGTCTCTAG	6826	False	NA	-24	True	AATAAA	-15	NA	69715939	69701560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_69701661_69702075_69702126_69709445_69709529_69711110_69711293_69711640_69711756_69715592
Isoform_101595_8	chr2	-	919	4	FSM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	5	1166	-2	-1166	multi-exon	FALSE	canonical	3	529	junction_1	42.2926313518876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTGATTGATTTTCAT	6822	False	NA	NA	False	NA	NA	NA	69715943	69709257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69709529_69711110_69711293_69711640_69711756_69715592
Isoform_101597_8	chr2	-	1280	4	FSM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	7	803	0	-803	multi-exon	FALSE	canonical	3	529	junction_1	42.2926313518876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAGCTCATAT	6824	False	NA	NA	False	AATATA	-12	NA	69715941	69708894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69709529_69711110_69711293_69711640_69711756_69715592
Isoform_101600_20	chr2	-	897	3	ISM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	9	2766	2	-2766	5prime_fragment	FALSE	canonical	3	609	junction_2	8.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGGATTTTTCCTTGT	6826	False	NA	NA	False	TATAAA	-26	NA	69715939	69710857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_69711293_69711640_69711756_69715592
Isoform_101601_4	chr2	-	925	2	FSM	ENSMUSG00000086515.2	ENSMUST00000150702.2	608	2	-96	-221	-96	221	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTTGCTTTCGTGTGT	NA	False	NA	NA	False	NA	NA	NA	70339639	70333555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_70334300_70339458
Isoform_10161_3	chr10	-	162	1	Intergenic	novelGene_1106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAATATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	87039061	87038899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_87038900_87039100
Isoform_101613_29	chr2	-	4417	21	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-70	-2	combination_of_known_junctions	TRUE	canonical	3	27	junction_18	66.7850844126142	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGTGAAAATTACACT	NA	False	NA	NA	False	AATAAA	-20	NA	70656142	70542752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
Isoform_101619_188	chr2	-	4329	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-52	3	-52	-3	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACTGTGAAAATTACAC	NA	False	NA	NA	False	AATAAA	-19	NA	70656124	70542753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
Isoform_10162_6	chr10	-	178	1	Intergenic	novelGene_1107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATGTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87456960	87456782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_87456800_87457000
Isoform_101622_17	chr2	-	4468	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-190	2	-190	-2	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGTGAAAATTACACT	NA	False	NA	NA	False	AATAAA	-20	NA	70656262	70542752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
Isoform_10163_9	chr10	-	173	1	Intergenic	novelGene_1108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	2751	False	NA	NA	False	NA	NA	NA	87912586	87912413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_87912400_87912600
Isoform_101631_22	chr2	-	2113	10	NIC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	29.4505234814822	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	-3	True	NA	NA	NA	70885924	70794907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812312_70823827_70823920_70848563_70848719_70885714
Isoform_101632_178	chr2	-	2341	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	3	3	3	-3	multi-exon	FALSE	canonical	3	72	junction_7	14.8332292963476	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	-3	True	NA	NA	NA	70885924	70794907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
Isoform_101634_3	chr2	-	2538	11	NNC	ENSMUSG00000041975.18	novel	2473	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	38.7537094998659	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	0	True	NA	NA	NA	70885924	70794904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70872366_70872561_70885714
Isoform_101635_4	chr2	-	2292	9	FSM	ENSMUSG00000041975.18	ENSMUST00000112179.9	2297	9	2	3	2	-3	multi-exon	FALSE	canonical	2	6	junction_5	32.9393381840012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	-3	True	NA	NA	NA	70885925	70794907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70812198_70812540_70823827_70823920_70848563_70848719_70885714
Isoform_101637_3	chr2	-	2597	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-40	-55	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	42.0343774652235	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71197917	71105088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71174233_71174377_71196870_71196925_71197856
Isoform_101638_29	chr2	-	2393	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	-55	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	34.4382940017359	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71164438	71105088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164384
Isoform_101639_9	chr2	-	2868	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	420	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	34.4382940017359	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71164438	71104613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164384
Isoform_10164_13	chr10	-	5477	1	FSM	ENSMUSG00000088843.4	ENSMUST00000158218.4	115	1	-2587	-2775	-2587	2775	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-30	NA	88003522	87998045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_87998000_88003500
Isoform_101640_10	chr2	-	2375	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5285	-53	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	37.8665419598886	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCCTCCTGATGAC	NA	False	NA	-5	True	AATAAA	-16	NA	71164469	71105086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164435
Isoform_101641_6	chr2	-	2655	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	5559	-55	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	39.6401292095523	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71168817	71105088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71168501
Isoform_101643_4	chr2	-	2432	18	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	-61	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_16	41.686837101695	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAAATTCATTCTCCTC	NA	False	NA	-13	True	AATAAA	-8	NA	71164438	71105094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71163948_71164065_71164384
Isoform_101644_5	chr2	-	2609	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5230	-55	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	45.2950887153165	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71164414	71105088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71160179_71160375_71163948_71164065_71164384
Isoform_101645_3	chr2	-	2561	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5249	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	45.4111532501232	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAAATTCATTCTCCTC	NA	False	NA	-13	True	AATAAA	-8	NA	71164433	71105094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71160240_71160375_71163948_71164065_71164384
Isoform_101648_7	chr2	-	2463	17	NIC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-9	-40	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	36.5893064125299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGACTTATGGAAATCAA	NA	False	NA	8	True	AATAAA	-29	NA	71178181	71105073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71178111
Isoform_101649_42	chr2	-	2474	18	FSM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	195	3682	-21	-55	multi-exon	FALSE	canonical	3	27	junction_16	36.6501273382513	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71197898	71105088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856
Isoform_10165_68	chr10	+	175	1	Intergenic	novelGene_1109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATAAAAATATCAA	NA	False	NA	NA	False	NA	NA	NA	88199201	88199376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_88199200_88199400
Isoform_101650_14	chr2	-	2938	18	FSM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	206	3207	-10	420	multi-exon	FALSE	canonical	3	27	junction_16	36.6501273382513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71197887	71104613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856
Isoform_101651_96	chr2	-	2288	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	-56	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_15	22.4311291636323	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71164438	71105089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
Isoform_101652_29	chr2	-	2762	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5252	420	at_least_one_novel_splicesite	TRUE	canonical	3	57	junction_15	22.4311291636323	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71164436	71104613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
Isoform_101653_22	chr2	-	2286	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5302	-55	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_15	28.2830141408035	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71164486	71105088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164435
Isoform_101654_8	chr2	-	2752	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5293	420	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_15	28.2830141408035	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71164477	71104613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164435
Isoform_101661_174	chr2	-	3898	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	-22	-6	-22	2	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTAGTCCGATGCA	4023	False	NA	0	True	AATAAA	-24	NA	72809652	72766989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
Isoform_101666_92	chr2	-	4116	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	-28	-218	-28	-7	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTAGCTTGAAAAAGT	4017	False	NA	-19	True	ATTAAA	-18	NA	72809658	72766777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
Isoform_101673_20	chr2	-	3967	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	-91	-6	-91	2	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTAGTCCGATGCA	3954	False	NA	0	True	AATAAA	-24	NA	72809721	72766989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
Isoform_10168_3	chr10	+	174	1	Intergenic	novelGene_1110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAACATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	88301368	88301542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_88301400_88301500
Isoform_101685_77	chr2	-	3974	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-13	220	-13	1	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTAGTCCGATGC	2872	False	NA	-1	True	AATAAA	-23	NA	72810803	72766990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
Isoform_10169_21	chr10	-	175	1	Intergenic	novelGene_1111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCACTGGAATTA	6701	False	NA	NA	False	NA	NA	NA	88472788	88472613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_88472600_88472800
Isoform_101692_47	chr2	-	4184	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-10	7	-10	-7	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTAGCTTGAAAAAGT	2875	False	NA	-19	True	ATTAAA	-18	NA	72810800	72766777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
Isoform_101713_351	chr2	-	1741	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	30	404	-5	-3	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCCTTGGTGTGTTT	NA	False	NA	-8	True	AATAAA	-11	NA	73044761	72923548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
Isoform_101714_82	chr2	-	2140	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	35	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCGTTTCTAAGGGGT	NA	False	NA	-13	True	ATTAAA	-14	NA	73044756	72923144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
Isoform_101720_19	chr2	-	989	8	FSM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	-84	0	-5	0	multi-exon	FALSE	canonical	3	49	junction_1	132.211333609089	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTGTTTTGTTCAATG	NA	False	NA	-1	True	AATAAA	-19	NA	73044761	72967870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_72968000_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
Isoform_101726_53	chr2	-	1881	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	28	-767	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCATGTCCTTAAGAC	NA	False	NA	NA	False	AATAAA	-13	NA	73142883	73114215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
Isoform_101731_7	chr2	-	4459	8	FSM	ENSMUSG00000075284.11	ENSMUST00000102680.8	4032	8	2	-429	2	0	multi-exon	FALSE	canonical	1	2	junction_7	18.1647786574312	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGTGGCTTTCTTGTCT	NA	False	NA	0	True	AATAAA	-21	NA	73316105	73259953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73315966
Isoform_101735_5	chr2	-	4443	8	NIC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-35	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	16.5849698368672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGACTTGTGGCTTTCTTGT	NA	False	NA	-2	True	AATAAA	-19	NA	73316848	73259955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73316723
Isoform_10174_4	chr10	+	173	1	Intergenic	novelGene_1112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAGAAACCCTA	NA	False	NA	NA	False	NA	NA	NA	88543774	88543947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_88543800_88543900
Isoform_101740_4	chr2	-	4874	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	-145	-1	-145	1	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGGCTTTCTTGTCTG	NA	False	NA	1	True	AATAAA	-22	NA	73360223	73259952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
Isoform_101742_4	chr2	-	3652	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	-155	1231	-155	-802	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGACATTCCTATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	73360233	73261184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
Isoform_101743_23	chr2	-	4463	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	267	-2	12	2	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTCTTGTCTGT	NA	False	NA	2	True	AATAAA	-23	NA	73359811	73259951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
Isoform_10175_5	chr10	+	179	1	Intergenic	novelGene_1113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTGCTGCCTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	88563480	88563659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_88563500_88563700
Isoform_101755_13	chr2	-	4028	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	-23	45	-23	40	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCCTCTGGTCCTTGT	NA	False	NA	-1	True	NA	NA	NA	73605713	73441048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
Isoform_10176_96	chr7	-	177	1	Intergenic	novelGene_10028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43939014	43938837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_43938800_43939000
Isoform_101764_27	chr2	-	4175	16	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	1	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	113.378108802165	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-17	NA	73722893	73646861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_73648076_73648101_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
Isoform_101767_7	chr2	-	4330	15	NIC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	95.5978236025853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73723024	73646863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
Isoform_101769_248	chr2	-	4123	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	1	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	83.6177222207575	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTGCTTGTTTTTAAT	NA	False	NA	-3	True	AATAAA	-22	NA	73722893	73646856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_73648080_73648099_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_10177_8	chr10	+	176	1	Intergenic	novelGene_1114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACTAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88623634	88623810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_88623600_88623800
Isoform_101772_63	chr2	-	4211	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-68	-1747	5	1	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722967	73646862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_101775_17	chr2	-	3584	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	2	-521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.6177222207575	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTTTGTATCTATTAC	NA	False	NA	NA	False	ATTAAA	-24	NA	73722892	73647388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_73648076_73648101_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_101779_10	chr2	-	4099	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112007.8	4195	14	82	14	1	1	multi-exon	FALSE	canonical	3	36	junction_11	109.668839867438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTTATAATTTGCT	NA	False	NA	-13	True	AATAAA	-12	NA	73722893	73646866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
Isoform_10178_8	chr10	-	366	1	Genic_Genomic	ENSMUSG00000004356.9	novel	NA	NA	NA	NA	-19	-1451	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACATTA	NA	False	NA	NA	False	GGGGCT	-31	NA	88662685	88662319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_88662300_88662700
Isoform_101783_18	chr2	-	4107	13	FSM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	-84	14	-6	1	multi-exon	FALSE	canonical	3	85	junction_9	68.6093510795398	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTTATAATTTGCT	NA	False	NA	-13	True	AATAAA	-12	NA	73722964	73646866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_101784_45	chr2	-	4010	14	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	101.183353403201	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTTATAATTTGCT	NA	False	NA	-13	True	AATAAA	-12	NA	73722893	73646866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_73648080_73648105_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_101787_39	chr2	-	3818	13	NNC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.680213879477	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-17	NA	73722893	73646861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_73648076_73648101_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_101788_16	chr2	-	3921	12	FSM	ENSMUSG00000027104.19	ENSMUST00000112016.9	3943	12	12	10	1	1	multi-exon	FALSE	canonical	3	57	junction_5	77.3989343681314	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722971	73646862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_101790_11	chr2	-	3720	12	NNC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.168041296216	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722893	73646862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_73648076_73648101_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_101791_11	chr2	-	3820	11	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	101.64742987405	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTTATAATTTGCT	NA	False	NA	-13	True	AATAAA	-12	NA	73722971	73646866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_101800_684	chr2	-	697	5	FSM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	25	1	-9	-1	multi-exon	FALSE	canonical	3	880	junction_4	1495.60896878161	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGCTGTGATTTGTAC	NA	False	NA	-22	True	ATTAAA	-14	NA	73741644	73738791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741585
Isoform_101802_1816	chr2	-	687	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	26	1	-9	-1	multi-exon	FALSE	canonical	3	2058	junction_4	989.165146727279	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGCTGTGATTTGTAC	NA	False	NA	-22	True	ATTAAA	-14	NA	73741644	73738791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
Isoform_101803_140	chr2	-	730	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	-17	1	-17	-1	multi-exon	FALSE	canonical	3	2058	junction_4	989.165146727279	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGCTGTGATTTGTAC	NA	False	NA	-22	True	ATTAAA	-14	NA	73741687	73738791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
Isoform_101808_4	chr2	-	3188	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	-18	151	-18	-101	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTGTTCTGAACAGA	NA	False	NA	-122	True	ATTAAA	-19	NA	74409310	74350785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
Isoform_101809_39	chr2	-	3245	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	28	48	-4	2	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGTGTTTATTTTT	NA	False	NA	-19	True	ATTAAA	-38	NA	74409264	74350682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
Isoform_10181_3	chr10	+	172	1	Intergenic	novelGene_1116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAATAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	89609506	89609678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_89609500_89609700
Isoform_101812_4	chr2	-	2448	13	NIC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	69.9761864255739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGTTAAATATCTAGA	NA	False	NA	-13	True	AATAAA	-19	NA	74409276	74351675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74408895
Isoform_101814_18	chr2	-	2136	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	1	1058	1	-59	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTTGTGTGTGTGTGT	NA	False	NA	-73	True	TATAAA	-1	NA	74409291	74351735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
Isoform_101815_223	chr2	-	3163	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	28	4	-4	3	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGTGTTTATTTTTA	NA	False	NA	-18	True	ATTAAA	-39	NA	74409264	74350681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
Isoform_101816_16	chr2	-	3086	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	1	108	1	-101	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTGTTCTGAACAGA	NA	False	NA	-122	True	ATTAAA	-19	NA	74409291	74350785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
Isoform_101818_4	chr2	-	6512	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	15	-3332	-2	3289	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTTTAGGCAATTAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	74409277	74347345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
Isoform_101819_5	chr2	-	5768	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	28	-2601	-4	2558	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTCATTGTACATATACA	NA	False	NA	NA	False	TATAAA	-19	NA	74409264	74348076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
Isoform_10182_82	chr19	+	176	1	Intergenic	novelGene_5567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3567037	3567213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_3567000_3567200
Isoform_101820_16	chr2	-	3117	12	FSM	ENSMUSG00000009207.16	ENSMUST00000134641.8	2120	12	-3	-994	-3	2	multi-exon	FALSE	canonical	2	13	junction_8	78.2650719516906	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGTGTTTATTTTT	NA	False	NA	-19	True	ATTAAA	-38	NA	74409278	74350682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
Isoform_101827_1285	chr2	-	2376	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	94	5	-58	-5	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTTTGGACTTTTTGA	NA	False	NA	-4	True	AATAAA	-17	NA	75534891	75505861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
Isoform_10183_13	chr10	+	178	1	Intergenic	novelGene_1117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATAGT	4071	False	NA	NA	False	NA	NA	NA	89690464	89690642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_89690500_89690600
Isoform_101833_22	chr2	-	2273	5	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	510	-5	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	215.843693445048	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTTTGGACTTTTTGA	NA	False	NA	-4	True	AATAAA	-17	NA	75534323	75505861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534242
Isoform_10184_28	chr10	-	162	1	Intergenic	novelGene_1118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAGGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	89707799	89707637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_89707600_89707800
Isoform_101844_73	chr2	-	655	4	FSM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	45.146674542232	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCGTTATGTTTATGA	NA	False	NA	1	True	AATAAA	-30	NA	76190794	76184285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_76184581_76186423_76186617_76187916_76187946_76190656
Isoform_101846_31	chr2	-	597	3	NIC	ENSMUSG00000056436.5	novel	655	4	NA	NA	21	-8	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	94.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCCACTCGTGCGTTAT	NA	False	NA	-7	True	AATAAA	-22	NA	76190773	76184293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_76184581_76186423_76186617_76190656
Isoform_101847_53	chr2	-	1575	8	FSM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	-1	40	-1	-40	multi-exon	TRUE	canonical	3	32	junction_1	7.52953368748825	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGAGCTCTGCTCATTTT	NA	False	NA	-5	True	NA	NA	NA	76478360	76460281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
Isoform_101849_11	chr2	-	821	6	ISM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	-2	6846	-2	51	5prime_fragment	FALSE	canonical	3	42	junction_4	3.65513337649941	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCCTTCATTTCTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	76478361	76467087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
Isoform_10185_348	chr10	+	323	1	Intergenic	novelGene_1119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-12	NA	89714111	89714434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_89714100_89714400
Isoform_101850_12	chr2	-	903	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	-45	2	1	-2	multi-exon	FALSE	canonical	3	16	junction_2	10.2089285540757	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTTTGCAAATCTGA	NA	False	NA	-15	True	AATAAA	-24	NA	76503459	76493389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
Isoform_101852_18	chr2	-	6304	24	FSM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	10	-92	3	-1	multi-exon	TRUE	canonical	3	17	junction_12	5.82219207901242	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAGGACCTCAATCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	77000951	76840246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
Isoform_101853_5	chr2	-	5710	23	FSM	ENSMUSG00000044033.17	ENSMUST00000049544.14	8969	23	8	3251	8	-1606	multi-exon	FALSE	canonical	3	17	junction_11	5.83396297270922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGATGTTGTCTGAGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	77000971	76843496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
Isoform_101855_7	chr2	-	3011	18	ISM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	-14	20571	4	82	5prime_fragment	FALSE	canonical	3	17	junction_6	6.20190840145751	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAGAAAGTTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	77000975	76860909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
Isoform_101858_13	chr2	-	3040	19	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-225	5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	32.5521898146407	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAATTTGGTAGTTACG	NA	False	NA	NA	False	AATAAA	-19	NA	77111161	77016893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
Isoform_101860_15	chr2	-	3466	19	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-177	479	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	32.5521898146407	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTATGTTTGTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	77111113	77016419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
Isoform_101861_69	chr2	-	3410	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-211	-479	-211	479	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTATGTTTGTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	77111147	77016419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
Isoform_101862_77	chr2	-	2918	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-192	-6	-192	6	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTGGTAGTTACGT	NA	False	NA	NA	False	AATAAA	-20	NA	77111128	77016892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
Isoform_101865_10	chr2	-	9103	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-177	-6206	-177	-9	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCTAGGGGGAATTTA	NA	False	NA	-19	True	AATAAA	-10	NA	77111113	77010692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
Isoform_101869_40	chr2	-	3154	21	FSM	ENSMUSG00000027014.15	ENSMUST00000065889.10	3471	21	203	114	8	-1	multi-exon	FALSE	canonical	3	27	junction_20	67.1203955590251	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776516	77726110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77770645_77770707_77776493
Isoform_10187_3	chr10	-	168	1	Intergenic	novelGene_1120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGC	6968	False	NA	NA	False	NA	NA	NA	89734257	89734089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_89734100_89734300
Isoform_101870_3	chr2	-	3364	21	FSM	ENSMUSG00000027014.15	ENSMUST00000065889.10	3471	21	-6	113	-6	0	multi-exon	FALSE	canonical	3	27	junction_20	67.1203955590251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776725	77726109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77770645_77770707_77776493
Isoform_101871_22	chr2	-	3303	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	-29	114	-7	-1	multi-exon	FALSE	canonical	3	143	junction_19	43.213763581536	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776726	77726110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
Isoform_101872_51	chr2	-	3093	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	181	114	8	-1	multi-exon	FALSE	canonical	3	143	junction_19	43.213763581536	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776516	77726110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
Isoform_101873_4	chr2	-	3214	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	181	-7	8	7	multi-exon	TRUE	canonical	3	143	junction_19	43.213763581536	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGTACTCTGACAAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	77776516	77725989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
Isoform_101874_19	chr2	-	3157	21	NIC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_20	70.3935188778058	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776516	77726110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77770645_77770707_77776493
Isoform_101875_9	chr2	-	3305	20	NIC	ENSMUSG00000027014.15	novel	3090	20	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	102	junction_18	49.445736787175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776725	77726110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
Isoform_101876_26	chr2	-	3109	20	NIC	ENSMUSG00000027014.15	novel	3388	20	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	102	junction_18	49.445736787175	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776529	77726110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
Isoform_101877_3	chr2	-	3224	20	NIC	ENSMUSG00000027014.15	novel	3388	20	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	102	junction_18	49.445736787175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGGTACTCTGACAAGT	NA	False	NA	NA	False	AATAAA	-22	NA	77776524	77725990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
Isoform_101879_28	chr2	-	3131	21	NIC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_20	72.1889707642379	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCATTGTCTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	77776513	77726112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77770645_77770707_77776493
Isoform_10188_13	chr10	+	176	1	Intergenic	novelGene_1121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAATGAAATAAAGGATA	NA	False	NA	NA	False	NA	NA	NA	90814849	90815025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_90814800_90815000
Isoform_101880_35	chr2	-	3075	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111818.8	3255	20	181	-1	8	-1	multi-exon	FALSE	canonical	3	78	junction_1	52.4085273558816	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776516	77726110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
Isoform_101881_20	chr2	-	3135	21	NIC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_20	75.0276449050615	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTCTTTTTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	77776513	77726111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77770645_77770707_77776493
Isoform_101882_29	chr2	-	3078	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111819.8	3090	20	11	1	8	-1	multi-exon	FALSE	canonical	3	78	junction_1	57.3448044097962	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776516	77726110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
Isoform_1019_1454	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1454	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6002_+_0_6000
Isoform_10190_3	chr10	-	159	1	Intergenic	novelGene_1122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	90940621	90940462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_90940500_90940600
Isoform_101900_1612	chr2	-	4487	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-20	2	-20	-2	multi-exon	TRUE	canonical	3	653	junction_15	66.8594213422628	1612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTCTTTAAAATCTT	NA	False	NA	-2	True	AATAAA	-23	NA	80411628	80330857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
Isoform_101910_27	chr2	-	1323	9	FSM	ENSMUSG00000027082.16	ENSMUST00000028487.10	1492	9	173	-4	173	-1	multi-exon	FALSE	canonical	3	41	junction_8	57.5972004527998	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTTGACTGTCCCCCT	NA	False	NA	-3	True	AATAAA	-18	NA	84304345	84263199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286
Isoform_101911_3	chr2	-	1691	11	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	91.0736515134866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCATGTTGACTGTCCC	NA	False	NA	-6	True	AATAAA	-15	NA	84307107	84263202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304530_84305105_84305270_84307084
Isoform_101912_7	chr2	-	1580	10	NIC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	79.6129526033435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTTGACTGTCCCCCT	NA	False	NA	-3	True	AATAAA	-18	NA	84307107	84263199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304530_84307034
Isoform_101913_6	chr2	-	1671	11	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	89.6026785313921	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTTGACTGTCCCCCT	NA	False	NA	-3	True	AATAAA	-18	NA	84307107	84263199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84305105_84305270_84307034
Isoform_101914_5	chr2	-	1637	11	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	90.1066590214064	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307124	84263200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84305105_84305270_84307084
Isoform_101915_5	chr2	-	1473	10	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	80.5367794209961	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307124	84263200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84307084
Isoform_101916_85	chr2	-	1337	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	91	junction_8	41.6863286941894	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTTGACTGTCCCCCT	NA	False	NA	-3	True	AATAAA	-18	NA	84307107	84263199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
Isoform_101917_117	chr2	-	1299	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	40.1230529122598	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTTGACTGTCCCCCT	NA	False	NA	-3	True	AATAAA	-18	NA	84307119	84263199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
Isoform_101920_3	chr2	-	1831	8	FSM	ENSMUSG00000027082.16	ENSMUST00000090732.10	3576	8	4	1741	4	-1158	multi-exon	FALSE	canonical	3	6	junction_1	78.0159585977021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTTATTTGCATATT	NA	False	NA	NA	False	AATAAA	-41	NA	84307115	84272224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84273270_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
Isoform_101922_9	chr2	-	5354	19	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	52.6901319034219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481086	84431126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_84433245_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
Isoform_10193_174	chr10	-	178	1	Intergenic	novelGene_1123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATGTGC	NA	False	NA	NA	False	NA	NA	NA	90964519	90964341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_90964300_90964500
Isoform_101939_10	chr2	-	5464	20	FSM	ENSMUSG00000034101.15	ENSMUST00000067232.10	6119	20	-48	703	16	5	multi-exon	FALSE	canonical	3	20	junction_18	71.3035336138201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTGTGTCATTTCTTC	NA	False	NA	-31	True	AATAAA	-23	NA	84481068	84431119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
Isoform_101940_117	chr2	-	5339	19	FSM	ENSMUSG00000034101.15	ENSMUST00000111691.2	5380	19	41	0	16	0	multi-exon	FALSE	canonical	3	163	junction_18	37.1560356827033	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481068	84431126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
Isoform_101943_7	chr2	-	5074	19	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-8212	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	60.7195790824559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGGAGGTCTGTGTC	NA	False	NA	-39	True	AATAAA	-15	NA	84489321	84431127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84489266
Isoform_101945_5	chr2	-	5017	18	FSM	ENSMUSG00000034101.15	ENSMUST00000099941.9	5783	18	54	712	-15	0	multi-exon	FALSE	canonical	3	26	junction_17	58.4555549380398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481035	84431126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
Isoform_101947_5	chr2	-	5462	19	FSM	ENSMUSG00000034101.15	ENSMUST00000111692.8	6170	19	-1	709	-1	-1	multi-exon	FALSE	canonical	3	20	junction_17	80.2536295860094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGAGGTCTGTGTCAT	NA	False	NA	-37	True	AATAAA	-17	NA	84481090	84431125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
Isoform_101948_40	chr2	-	5327	18	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	52.9317638691323	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481074	84431126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
Isoform_10195_14	chr10	-	186	1	Intergenic	novelGene_1124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACATAAGTCTATGGGGG	NA	False	NA	NA	False	NA	NA	NA	90969484	90969298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_90969300_90969500
Isoform_101955_6	chr2	-	5408	19	NIC	ENSMUSG00000034101.15	novel	5126	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	76.0293965239924	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481082	84431126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
Isoform_101956_55	chr2	-	5276	18	FSM	ENSMUSG00000034101.15	ENSMUST00000111697.9	5294	18	16	2	16	0	multi-exon	FALSE	canonical	3	106	junction_2	44.1949127323348	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481068	84431126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
Isoform_10196_14	chr10	+	177	1	Intergenic	novelGene_1125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGTTATATTG	3726	False	NA	NA	False	NA	NA	NA	90973985	90974162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_90974000_90974200
Isoform_101960_8	chr2	-	4992	17	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_16	64.3316298079724	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481073	84431126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
Isoform_101962_23	chr2	-	5276	17	FSM	ENSMUSG00000034101.15	ENSMUST00000066177.10	5044	17	-232	0	-2	0	multi-exon	FALSE	canonical	3	59	junction_8	59.0602182098915	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481086	84431126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
Isoform_101969_1324	chr2	-	654	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	85	8	-9	-2	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGGAGCAAGTTTAAAT	381	False	NA	-16	True	AATAAA	-17	NA	84501029	84499566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
Isoform_101970_97	chr2	-	709	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	31	7	31	-1	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAGCAAGTTTAAATT	327	False	NA	-15	True	AATAAA	-18	NA	84501083	84499565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
Isoform_101976_161	chr2	-	629	4	FSM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	24	1	-8	-1	multi-exon	FALSE	canonical	3	329	junction_1	946.216677088287	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAGCAAGTTTAAATT	382	False	NA	-15	True	AATAAA	-18	NA	84501028	84499565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84499742_84500355_84500461_84500588_84500735_84500826
Isoform_101979_18	chr2	-	781	3	FSM	ENSMUSG00000076437.12	ENSMUST00000102646.4	783	3	13	-11	-8	11	multi-exon	FALSE	canonical	3	2216	junction_1	111	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGGTTTTTCTCCCTTG	382	False	NA	NA	False	AATAAA	-26	NA	84501028	84500027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84500461_84500588_84500735_84500826
Isoform_101985_1986	chr2	-	1987	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-9	-1	-9	0	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	1986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	5282	False	NA	-7	True	AATAAA	-17	NA	84508409	84501659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
Isoform_102000_142	chr2	-	1857	7	FSM	ENSMUSG00000050043.17	ENSMUST00000111664.8	1926	7	70	-1	1	1	multi-exon	FALSE	canonical	3	107	junction_5	582.842865235181	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGCTGTTTTTCCTTT	5299	False	NA	-6	True	AATAAA	-18	NA	84508392	84501658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506440_84506502_84508194
Isoform_102009_370	chr2	-	4476	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	65	165	65	-165	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGACTTGTGTTTTGT	NA	False	NA	0	True	AATAAA	-23	NA	84545459	84518478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
Isoform_102012_98	chr2	-	4503	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	38	165	38	-165	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGACTTGTGTTTTGT	NA	False	NA	0	True	AATAAA	-23	NA	84545486	84518478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
Isoform_102013_89	chr2	-	4675	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	-137	168	-137	-168	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCCCTGACTTGTGTTT	NA	False	NA	-3	True	AATAAA	-20	NA	84545661	84518481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
Isoform_102014_20	chr2	-	4639	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	65	2	65	-2	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGCTATTCCTTTG	NA	False	NA	NA	False	AATACA	-13	NA	84545459	84518315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
Isoform_102018_222	chr2	-	1848	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	63	1	-11	-1	multi-exon	FALSE	canonical	3	238	junction_1	30.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTATGATTCTTTTTT	NA	False	NA	-22	True	AATAAA	-16	NA	84557631	84553466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84554562_84555872_84556501_84557506
Isoform_102021_7	chr2	-	2186	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	63	-337	-11	337	multi-exon	FALSE	canonical	3	238	junction_1	30.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-36	NA	84557631	84553128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84554562_84555872_84556501_84557506
Isoform_102023_3	chr2	-	822	2	FSM	ENSMUSG00000097187.2	ENSMUST00000181711.2	726	2	-101	5	-101	-5	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGACACTCTCCTGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	84574100	84572517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84573045_84573805
Isoform_102025_117	chr2	-	1776	7	ISM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	565	-25	289	25	3prime_fragment	FALSE	canonical	3	78	junction_3	14.4270194041905	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTGTGTACTAGTTC	NA	False	NA	-1	True	AATAAA	-26	NA	84605183	84595705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
Isoform_102026_10	chr2	-	1827	7	ISM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	516	-27	240	27	3prime_fragment	FALSE	canonical	3	78	junction_3	14.4270194041905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGTACTAGTTCCC	NA	False	NA	1	True	AATAAA	-28	NA	84605232	84595703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
Isoform_102027_16	chr2	-	1822	8	FSM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	-27	-27	13	27	multi-exon	FALSE	canonical	3	11	junction_7	34.9080424626107	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGTACTAGTTCCC	NA	False	NA	1	True	AATAAA	-28	NA	84605775	84595703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083_84605159_84605706
Isoform_102033_17	chr2	-	797	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6603	0	6603	0	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	4372	False	NA	-19	True	AATAAA	-19	NA	84646393	84641519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
Isoform_102035_9	chr2	-	936	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6464	0	6464	0	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	4233	False	NA	-19	True	AATAAA	-19	NA	84646532	84641519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
Isoform_102037_6	chr2	-	857	5	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	5603	2	5603	-2	3prime_fragment	FALSE	canonical	3	6	junction_4	55.2222781130949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATGTGTGGCAGTTTG	3372	False	NA	-21	True	AATAAA	-17	NA	84647393	84641521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227_84646384_84647321
Isoform_102038_5	chr2	-	1663	8	FSM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	95	3	95	-3	multi-exon	FALSE	canonical	2	2	junction_5	63.4909603078763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCATGTGTGGCAGTTT	NA	False	NA	-22	True	AATAAA	-16	NA	84652901	84641522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227_84646384_84647321_84647368_84647467_84647601_84648619_84649255_84652836
Isoform_102039_6	chr2	-	2238	3	FSM	ENSMUSG00000050896.13	ENSMUST00000151799.8	1303	3	-320	-615	-320	615	multi-exon	FALSE	canonical	1	1	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGTAAGATTTTTTTT	9989	False	NA	NA	False	ATTAAA	-17	NA	84717374	84701652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84703040_84710731_84711214_84717005
Isoform_102040_4	chr2	-	2293	3	FSM	ENSMUSG00000050896.13	ENSMUST00000151799.8	1303	3	-375	-615	-375	615	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGTAAGATTTTTTTT	9934	False	NA	NA	False	ATTAAA	-17	NA	84717429	84701652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84703040_84710731_84711214_84717005
Isoform_102041_3	chr2	-	1802	13	NIC	ENSMUSG00000027071.15	novel	1812	12	NA	NA	56	16	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	7.59751421336099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTGTCAGTTGCCTT	NA	False	NA	NA	False	AATGAA	-17	NA	84863598	84828910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84862864_84862892_84863344
Isoform_102042_6	chr2	-	1839	12	FSM	ENSMUSG00000027071.15	ENSMUST00000028465.14	1812	12	-13	-14	-13	14	multi-exon	FALSE	canonical	2	7	junction_11	6.62452243717697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTCTGTGTCAGTTGCC	NA	False	NA	NA	False	AATGAA	-15	NA	84865844	84828912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84865524
Isoform_102044_4	chr2	-	2199	14	NNC	ENSMUSG00000027071.15	novel	1812	12	NA	NA	-27	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	8.90847611803288	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTCTGTGTCAGTTGC	NA	False	NA	NA	False	AATGAA	-14	NA	84863565	84828913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84856975_84857409_84862864_84862892_84863344
Isoform_102045_3	chr2	-	1909	4	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-24	2	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	11.1455023315337	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	87327461	87319428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_87320426_87321167_87321750_87322478_87322538_87327190
Isoform_102046_10	chr2	-	2203	4	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-67	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	7.40870359029762	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	87327504	87319428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_87320426_87321167_87321750_87322478_87322789_87327190
Isoform_102047_14	chr2	-	1936	4	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	7.40870359029762	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTTA	NA	False	NA	-4	True	AATAAA	-19	NA	87327236	87319427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_87320426_87321167_87321750_87322478_87322789_87327190
Isoform_102050_23	chr2	-	7572	23	NIC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	52	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	15.2967884059756	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTCGATTGATTC	NA	False	NA	NA	False	TATAAA	-14	NA	90410939	90263233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90305314_90305334_90410499
Isoform_102051_13	chr2	-	5605	23	NIC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	15	-2005	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	15.2967884059756	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGGCTCAGGTTATAT	NA	False	NA	NA	False	NA	NA	NA	90410976	90265237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90305314_90305334_90410499
Isoform_102052_7	chr2	-	7610	23	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.6830899810409	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTTCGATTGATTCA	NA	False	NA	NA	False	TATAAA	-15	NA	90410973	90263232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298810_90299877_90300106_90301436_90301680_90305314_90305334_90410499
Isoform_102054_794	chr2	-	888	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	165	-7	-20	5	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGGTGGTTGTTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	90735006	90724972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
Isoform_102055_206	chr2	-	947	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	106	-7	-19	5	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGGTGGTTGTTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	90735065	90724972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
Isoform_102057_18	chr2	-	2730	5	NIC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	11	6	intron_retention	FALSE	canonical	3	1877	junction_4	26.2963875846094	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTGGTTGTTTTTT	NA	False	NA	-3	True	AATAAA	-24	NA	90735035	90724971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90734833_90734927
Isoform_102059_15	chr2	-	901	3	ISM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	278	-139	3	intron_retention	FALSE	canonical	3	356	junction_2	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGTCTGGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	90748152	90741334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_90741664_90744327_90744520_90747772
Isoform_102063_23	chr2	-	1317	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	-3	2	-3	-2	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGACTCCCCTCA	NA	False	NA	-3	True	AATAAA	-24	NA	90748392	90741058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_102064_95	chr2	-	801	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	278	-139	3	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGTCTGGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	90748152	90741334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_102066_56	chr2	-	1021	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	17	278	17	3	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGTCTGGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	90748372	90741334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_102067_37	chr2	-	1069	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	-31	278	-31	3	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGTCTGGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	90748420	90741334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_102068_53	chr2	-	1077	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	2	-139	-2	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGACTCCCCTCA	NA	False	NA	-3	True	AATAAA	-24	NA	90748152	90741058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_102074_35	chr2	-	2378	10	FSM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	91	0	-28	0	multi-exon	FALSE	canonical	3	29	junction_7	9.55684745788763	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4258	False	NA	0	True	AATAAA	-15	NA	90900671	90892135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775_90899085_90900499
Isoform_102076_14	chr2	-	2418	10	FSM	ENSMUSG00000002105.16	ENSMUST00000111436.3	1291	10	-44	-1083	-29	0	multi-exon	FALSE	canonical	3	19	junction_7	11.8831761976001	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4257	False	NA	0	True	AATAAA	-15	NA	90900672	90892135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896085_90896357_90896472_90898775_90899085_90900499
Isoform_102077_19	chr2	-	2276	9	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	17.0105665690476	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4258	False	NA	0	True	AATAAA	-15	NA	90900671	90892135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896046_90896357_90896472_90898775_90899085_90900499
Isoform_102079_4	chr2	-	2313	9	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-26	0	combination_of_known_junctions	TRUE	canonical	1	5	junction_5	18.3877506781009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4260	False	NA	0	True	AATAAA	-15	NA	90900669	90892135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896085_90896357_90896472_90898775_90899085_90900499
Isoform_102080_4	chr2	-	5908	33	NIC	ENSMUSG00000040687.17	novel	5974	36	NA	NA	-36	0	intron_retention	TRUE	canonical	2	6	junction_12	4.88460592064498	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCTCCTGTGCACTC	NA	False	NA	-2	True	AATAAA	-14	NA	91013270	90967705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
Isoform_102081_65	chr2	-	1803	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	27	-273	5	5	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCCAAAAGCCCAACAG	3024	False	NA	-37	True	AATAAA	-24	NA	91067300	91041927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
Isoform_102085_19	chr2	-	2306	9	FSM	ENSMUSG00000002109.15	ENSMUST00000111352.8	2228	9	-59	-19	16	4	multi-exon	FALSE	canonical	3	65	junction_7	15.7594217850783	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCCAAAAGCCCAACA	3035	False	NA	-38	True	AATAAA	-23	NA	91067289	91041928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91065297_91067034
Isoform_102086_14	chr2	-	2172	8	NIC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	5	5	intron_retention	FALSE	canonical	3	12	junction_6	30.9970373831212	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCCAAAAGCCCAACAG	3024	False	NA	-37	True	AATAAA	-24	NA	91067300	91041927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91064452_91065297_91067034
Isoform_102088_3	chr2	-	1252	6	NIC	ENSMUSG00000002109.15	novel	1592	9	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	40.7892142606351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACTAAAAACCCAAAAGCC	3002	False	NA	-43	True	AATAAA	-18	NA	91067322	91041933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91064452_91064645_91065159_91065297_91067034
Isoform_102089_55	chr2	-	1622	9	FSM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	-60	415	2	-1	multi-exon	TRUE	canonical	3	72	junction_5	19.7673974007708	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGAGTCTAAAGCCA	NA	False	NA	-8	True	AATAAA	-17	NA	91275047	91108589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
Isoform_102091_4	chr2	-	2190	12	ISM	ENSMUSG00000027249.16	ENSMUST00000028681.15	1988	14	756	0	737	0	3prime_fragment	FALSE	canonical	2	11	junction_5	2.63165724111457	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCAGTGTGCCCAATGC	NA	False	NA	NA	False	AATAAA	-15	NA	91466003	91455664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463320_91463458_91463535_91463642_91465243_91465295_91465515
Isoform_102092_11	chr2	-	1863	13	ISM	ENSMUSG00000027249.16	ENSMUST00000028681.15	1988	14	501	0	482	0	3prime_fragment	FALSE	canonical	2	10	junction_12	3.05845821725043	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCAGTGTGCCCAATGC	NA	False	NA	NA	False	AATAAA	-15	NA	91466258	91455664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463320_91463458_91463535_91463642_91465243_91465295_91465515_91465541_91466122
Isoform_102093_5	chr2	-	1995	13	ISM	ENSMUSG00000027249.16	ENSMUST00000028681.15	1988	14	371	-2	352	2	3prime_fragment	FALSE	canonical	2	10	junction_12	3.05845821725043	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGCCCAATGCTG	NA	False	NA	NA	False	AATAAA	-17	NA	91466388	91455662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463320_91463458_91463535_91463642_91465243_91465295_91465515_91465541_91466122
Isoform_102095_4	chr2	-	3536	6	NIC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	7.67854152818099	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGACAAAAGC	NA	False	NA	NA	False	NA	NA	NA	91480118	91474031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479280_91479372_91479495_91479771_91480048
Isoform_102096_11	chr2	-	3729	4	FSM	ENSMUSG00000075040.10	ENSMUST00000111333.2	3740	4	11	0	-1	0	multi-exon	FALSE	canonical	3	9	junction_3	6.54896090146283	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAAG	NA	False	NA	NA	False	NA	NA	NA	91480125	91474032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495
Isoform_102097_27	chr2	-	3463	5	FSM	ENSMUSG00000075040.10	ENSMUST00000099714.10	3469	5	-12	18	0	1	multi-exon	FALSE	canonical	3	3	junction_4	8.1967981553775	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGACAAAAGC	NA	False	NA	NA	False	NA	NA	NA	91480136	91474031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480048
Isoform_102098_6	chr2	-	3602	5	FSM	ENSMUSG00000075040.10	ENSMUST00000099714.10	3469	5	4	-137	4	137	multi-exon	FALSE	canonical	3	3	junction_4	8.1967981553775	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGTATAAAGAGAACTGG	NA	False	NA	NA	False	AATAAA	-19	NA	91480120	91473876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480048
Isoform_10210_4	chr10	+	1380	1	Antisense	novelGene_ENSMUSG00000019961.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	CATAAA	-23	NA	91005127	91006507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_91005100_91006500
Isoform_102102_28	chr2	-	3639	17	FSM	ENSMUSG00000027244.15	ENSMUST00000028678.9	3604	17	-36	1	21	-1	multi-exon	FALSE	canonical	3	29	junction_7	76.9829526583646	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCCTATTCCAAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	91540900	91504964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
Isoform_102106_16	chr2	-	3599	17	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	-28	-6	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	79.205207175728	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGCTTCCTATTCCA	NA	False	NA	-7	True	AATAAA	-13	NA	91540892	91504969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512455_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
Isoform_102109_18	chr2	-	3481	16	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-113	-6	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	61.7638513479635	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGCTTCCTATTCCA	NA	False	NA	-7	True	AATAAA	-13	NA	91536192	91504969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535925
Isoform_102115_254	chr2	-	3514	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	30	7	-27	-6	multi-exon	FALSE	canonical	3	217	junction_4	20.2170445141937	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGCTTCCTATTCCA	NA	False	NA	-7	True	AATAAA	-13	NA	91540891	91504969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
Isoform_10212_4	chr10	+	170	1	Intergenic	novelGene_1127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAAAAAGTGATTAT	NA	False	NA	NA	False	NA	NA	NA	91020852	91021022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_91020900_91021000
Isoform_102131_60	chr2	-	3450	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	21	-1	combination_of_known_junctions	TRUE	canonical	3	44	junction_3	59.708176379208	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCCTATTCCAAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	91540900	91504964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
Isoform_102139_55	chr2	-	918	4	ISM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	9	22	9	1	intron_retention	FALSE	canonical	3	2268	junction_3	242.697342383472	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762024	91760171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716
Isoform_102142_299	chr2	-	863	5	FSM	ENSMUSG00000027239.15	ENSMUST00000090602.6	714	5	-10	-139	-10	1	multi-exon	FALSE	canonical	3	492	junction_4	939.630878324036	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762054	91760171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761878
Isoform_102144_65	chr2	-	792	5	FSM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	-46	25	-35	-2	multi-exon	FALSE	canonical	3	95	junction_4	1107.84859073792	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATAAAAGCTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	91762079	91760174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761971
Isoform_102145_1163	chr2	-	723	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	48	2	-33	-2	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATAAAAGCTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	91762077	91760174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
Isoform_102146_23	chr2	-	823	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	-49	-1	-49	1	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762174	91760171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
Isoform_102149_26	chr2	-	743	5	FSM	ENSMUSG00000027239.15	ENSMUST00000028672.13	1054	5	312	-1	-205	1	multi-exon	FALSE	canonical	3	113	junction_4	1100.19691419309	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762330	91760171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762274
Isoform_10215_13	chr10	-	184	1	Intergenic	novelGene_1128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAACTATAGGAA	6900	False	NA	NA	False	NA	NA	NA	91131529	91131345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_91131300_91131500
Isoform_10216_12	chr10	-	162	1	Intergenic	novelGene_1129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAGTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	92124570	92124408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_92124400_92124600
Isoform_102161_354	chr2	-	3484	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	102	-2	102	0	multi-exon	FALSE	canonical	3	212	junction_9	28.4788615565222	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	False	NA	-3	True	AGTAAA	-18	NA	91793900	91763168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_102162_139	chr2	-	3581	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	3	0	3	0	multi-exon	FALSE	canonical	3	212	junction_9	28.4788615565222	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91793999	91763170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_102163_61	chr2	-	3635	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	-51	0	-51	0	multi-exon	FALSE	canonical	3	212	junction_9	28.4788615565222	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91794053	91763170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_102167_9	chr2	-	3914	31	FSM	ENSMUSG00000040479.13	ENSMUST00000099709.10	3512	31	-405	3	-405	0	multi-exon	FALSE	canonical	3	27	junction_30	51.2884652399218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	False	NA	-6	True	AGTAAA	-15	NA	91806614	91763171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91805911
Isoform_102171_95	chr2	-	3534	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_9	44.504232008503	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91793949	91763170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_102172_37	chr2	-	3589	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_9	44.504232008503	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	-2	True	AGTAAA	-19	NA	91794001	91763167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_102177_15	chr2	-	3589	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	54.0594323150199	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91793968	91763170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765244_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_10218_4	chr10	+	154	1	Intergenic	novelGene_1130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	92937003	92937157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_92937000_92937200
Isoform_102182_10	chr2	-	2021	10	ISM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	28915	0	28915	0	3prime_fragment	FALSE	canonical	3	8	junction_9	4.13058451009802	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGACTCTGTGTGTCCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	91825932	91812672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601
Isoform_102183_9	chr2	-	2616	12	FSM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	-14	1	-14	-1	multi-exon	FALSE	canonical	2	4	junction_10	5.08603662934522	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGACTCTGTGTGTCCT	NA	False	NA	NA	False	ATTAAA	-24	NA	91854861	91812673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601_91825787_91832189_91832419_91854348
Isoform_102185_5	chr2	-	2670	12	FSM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	-68	1	-68	-1	multi-exon	FALSE	canonical	2	4	junction_10	5.08603662934522	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGACTCTGTGTGTCCT	NA	False	NA	NA	False	ATTAAA	-24	NA	91854915	91812673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601_91825787_91832189_91832419_91854348
Isoform_102188_40	chr2	-	2418	15	FSM	ENSMUSG00000040434.17	ENSMUST00000176774.8	2377	15	-46	5	1	0	multi-exon	FALSE	canonical	0	0	junction_10	41.8854731039636	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATGTGTGAGTGTTTTG	NA	False	NA	-5	True	GGGGCT	-43	NA	92201377	92195395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200907_92201009_92201083_92201239_92201325
Isoform_102190_7	chr2	-	2461	14	ISM	ENSMUSG00000040434.17	ENSMUST00000068586.13	2445	15	71	0	0	0	intron_retention	FALSE	canonical	0	0	junction_10	36.163337542994	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGTGTTTTGTCTGT	NA	False	NA	0	True	NA	NA	NA	92201331	92195390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083
Isoform_102191_271	chr2	-	2426	15	FSM	ENSMUSG00000040434.17	ENSMUST00000068586.13	2445	15	13	6	-8	0	multi-exon	FALSE	canonical	0	0	junction_10	34.8762389144289	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201389	92195396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_102192_7	chr2	-	2346	14	FSM	ENSMUSG00000040434.17	ENSMUST00000176289.8	2310	14	-32	-4	-7	-1	multi-exon	FALSE	canonical	0	0	junction_10	44.6240044723457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGAGTGTTTTGTCT	NA	False	NA	-2	True	NA	NA	NA	92201388	92195392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200910_92201009_92201083_92201239_92201325
Isoform_102193_5	chr2	-	2471	15	NNC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	33.8288006748989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201377	92195396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200147_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_102194_6	chr2	-	2633	14	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	8	-1	intron_retention	FALSE	canonical	3	78	junction_9	20.7327314612946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGAGTGTTTTGTCT	NA	False	NA	-2	True	NA	NA	NA	92201394	92195392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_102196_8	chr2	-	2547	14	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_9	35.4661268514924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201388	92195391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_102198_5	chr2	-	2746	13	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	7	-1	intron_retention	FALSE	canonical	3	81	junction_9	19.1664855063902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATGTGTGAGTGTTT	NA	False	NA	-7	True	GGGGCT	-41	NA	92201395	92195397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_10220_18	chr10	+	176	1	FSM	ENSMUSG00000089214.3	ENSMUST00000158589.3	119	1	101	-158	101	158	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	92998747	92998923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_92998700_92998900
Isoform_102200_6	chr2	-	2337	14	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	48.3013224609771	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201402	92195396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199834_92200007_92200204_92200329_92200521_92200605_92200907_92201009_92201083_92201239_92201325
Isoform_102201_42	chr2	-	2326	14	FSM	ENSMUSG00000040434.17	ENSMUST00000090582.11	2291	14	-10	-25	-7	0	multi-exon	FALSE	canonical	0	0	junction_9	42.5506311706155	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGTGTTTTGTCTGT	NA	False	NA	0	True	NA	NA	NA	92201388	92195390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_102203_46	chr2	-	2620	10	ISM	ENSMUSG00000027223.16	ENSMUST00000111279.9	3274	12	3426	-2	3426	2	3prime_fragment	FALSE	canonical	3	69	junction_2	10.4822012578407	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGTGTATTTACT	NA	False	NA	-4	True	ATTAAA	-20	NA	92219650	92214018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319
Isoform_102204_140	chr2	-	2967	12	FSM	ENSMUSG00000027223.16	ENSMUST00000050312.3	2930	12	-31	-6	-31	2	multi-exon	FALSE	canonical	3	50	junction_10	15.2158030073021	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGTGTATTTACT	NA	False	NA	-4	True	ATTAAA	-20	NA	92231639	92214018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92231373
Isoform_102207_256	chr2	-	3963	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	9	4	2	-4	multi-exon	FALSE	canonical	3	83	junction_5	10.1019595513375	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTTGTGTAATCT	NA	False	NA	NA	False	TATAAA	-20	NA	92264379	92233994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
Isoform_102209_3	chr2	-	4066	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	9	-99	2	99	multi-exon	FALSE	canonical	3	83	junction_5	10.1019595513375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAGTCTTATTCTCCCT	NA	False	NA	NA	False	AGTAAA	-34	NA	92264379	92233891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
Isoform_102211_3	chr2	-	1880	11	FSM	ENSMUSG00000068742.12	ENSMUST00000111278.2	2160	11	0	280	0	-280	multi-exon	FALSE	canonical	3	83	junction_4	10.4446158378372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTTGCTACAGTTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	92264381	92241884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
Isoform_102212_113	chr2	-	3069	2	FSM	ENSMUSG00000049922.9	ENSMUST00000067631.7	3139	2	60	10	-25	-7	multi-exon	FALSE	canonical	3	54	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACAAACAAGATACAG	NA	False	NA	NA	False	AATAAA	-14	NA	92290079	92283118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92285120_92289011
Isoform_102213_60	chr2	-	3099	2	FSM	ENSMUSG00000049922.9	ENSMUST00000067631.7	3139	2	30	10	30	-7	multi-exon	FALSE	canonical	3	54	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACAAACAAGATACAG	NA	False	NA	NA	False	AATAAA	-14	NA	92290109	92283118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_92285120_92289011
Isoform_102216_3	chr2	-	3377	7	NIC	ENSMUSG00000075028.13	novel	3012	6	NA	NA	-125	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	1.91485421551268	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCTCCAGGATCTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	92876637	92815050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_92817132_92819576_92819999_92823708_92823777_92842971_92843235_92843657_92843762_92844109_92844235_92876323
Isoform_102219_8	chr2	-	3804	10	FSM	ENSMUSG00000027217.14	ENSMUST00000111265.9	3751	10	-54	1	-36	-1	multi-exon	FALSE	canonical	3	49	junction_2	5.53774924194538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTCTCATTGGTTG	NA	False	NA	-12	True	TATAAA	-15	NA	93164886	93032105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
Isoform_10222_4	chr10	+	159	1	Intergenic	novelGene_1131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACAAATTTT	NA	False	NA	NA	False	NA	NA	NA	93220589	93220748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_93220600_93220700
Isoform_102222_10	chr2	-	1811	10	FSM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	11	2	11	-2	multi-exon	FALSE	canonical	2	9	junction_8	1.4229164972073	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGTCTGAAGAGGCGG	NA	False	NA	NA	False	ATTAAA	-15	NA	93292836	93249457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
Isoform_102223_14	chr2	-	1764	10	FSM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	60	0	1	0	multi-exon	TRUE	canonical	2	9	junction_8	1.4229164972073	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCTGAAGAGGCGGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	93292787	93249455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
Isoform_102230_39	chr2	-	3053	16	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	164.700725222717	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652905	93525977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93651954_93652027_93652731
Isoform_102231_25	chr2	-	2987	15	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	155.373562350713	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652911	93525977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93652731
Isoform_102232_193	chr2	-	2930	15	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-4	-2	combination_of_known_junctions	TRUE	canonical	3	84	junction_13	124.260444885995	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652902	93525977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
Isoform_102234_1305	chr2	-	2858	14	FSM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	11	2	-4	-2	multi-exon	FALSE	canonical	3	390	junction_9	31.3157237855525	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652902	93525977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
Isoform_102236_21	chr2	-	3046	16	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	163.970647779819	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652903	93525977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650379_93650495_93651954_93652027_93652731
Isoform_102239_43	chr2	-	2773	13	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-2	-2	combination_of_known_splicesites	TRUE	canonical	3	30	junction_1	114.321519068906	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652900	93525977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93526617_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
Isoform_102243_18	chr2	-	2481	13	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	2	7310	-1	15	5prime_fragment	FALSE	canonical	3	390	junction_8	29.4206796129676	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAGATGAAGTAGTTAAC	NA	False	NA	NA	False	AATATA	-32	NA	93652911	93533285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
Isoform_102246_6	chr2	-	1983	15	NIC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-16	4	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	5.05682000583653	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCATTCTTTGTGATGG	NA	False	NA	NA	False	AAAAAG	-4	NA	93680304	93665778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678535_93680109
Isoform_102248_3	chr2	-	3099	16	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-218	-2	intron_retention	FALSE	canonical	1	2	junction_15	34.190057034173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCAGGCCTGCTTTAT	NA	False	NA	-3	True	AATAAA	-20	NA	93699720	93685708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93686126_93686248_93686326_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783
Isoform_102249_3	chr2	-	2332	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61388	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	23.8819375004523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCAGGCCTGCTTTAT	NA	False	NA	-3	True	AATAAA	-20	NA	93760890	93685708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_93686126_93687041_93687163_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
Isoform_10225_3	chr10	-	192	1	Intergenic	novelGene_1133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTTTTTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	93465391	93465199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_93465200_93465400
Isoform_102250_40	chr2	-	3019	15	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-213	0	intron_retention	FALSE	canonical	1	2	junction_14	23.4539279161056	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93699715	93685706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783
Isoform_102251_67	chr2	-	2436	15	FSM	ENSMUSG00000075023.12	ENSMUST00000099690.4	2224	15	-213	1	-213	0	multi-exon	FALSE	canonical	3	27	junction_14	17.5243271145093	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93699715	93685706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93699366
Isoform_102255_62	chr2	-	2365	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61386	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_14	11.1785143768512	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93760888	93685706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
Isoform_102256_3	chr2	-	3217	15	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-213	-2	intron_retention	FALSE	canonical	1	2	junction_14	30.3497469982394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCAGGCCTGCTTTAT	NA	False	NA	-3	True	AATAAA	-20	NA	93699715	93685708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93686326_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783
Isoform_102257_9	chr2	-	2567	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61388	0	intron_retention	FALSE	canonical	2	7	junction_1	23.1600465263358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93760890	93685706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_93686326_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
Isoform_102258_8	chr2	-	1654	10	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-4	2	intron_retention	FALSE	canonical	3	58	junction_9	37.2253730009751	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATTTGATCCAAAAGC	8871	False	NA	-5	True	ATTAAA	-22	NA	93841079	93810979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607
Isoform_102259_35	chr2	-	1384	11	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	43.1723291009415	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATCCAAAAGCTTTT	8871	False	NA	-1	True	ATTAAA	-26	NA	93841079	93810975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
Isoform_102260_6	chr2	-	1463	11	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	43.1723291009415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGAACATGTTTGTT	8871	False	NA	78	True	AATACA	-22	NA	93841079	93810896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
Isoform_102261_62	chr2	-	1257	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	-24	-5	0	-3	multi-exon	FALSE	canonical	3	71	junction_3	32.7210431781547	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGATCCAAAAGCTTT	8851	False	NA	-2	True	ATTAAA	-25	NA	93841099	93810976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
Isoform_102262_10	chr2	-	1321	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	-87	-6	-10	-2	multi-exon	FALSE	canonical	3	71	junction_3	32.7210431781547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATCCAAAAGCTTTT	8788	False	NA	-1	True	ATTAAA	-26	NA	93841162	93810975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
Isoform_102265_11	chr2	-	1168	9	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	40.6799628195504	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGATCCAAAAGCTTT	8851	False	NA	-2	True	ATTAAA	-25	NA	93841099	93810976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
Isoform_102267_3	chr2	-	2864	6	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	-4453	intron_retention	FALSE	canonical	3	87	junction_5	27.459060435492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8853	False	NA	NA	False	NA	NA	NA	93841097	93831044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
Isoform_10227_30	chr10	+	175	1	Intergenic	novelGene_1134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAGAAAAGT	221	False	NA	NA	False	NA	NA	NA	93596202	93596377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_93596200_93596400
Isoform_102274_129	chr2	-	1900	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	-5	7	-5	6	multi-exon	FALSE	canonical	3	670	junction_5	45.0653969249135	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGTGTATTTTTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	93988314	93863040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
Isoform_102275_840	chr2	-	1833	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	62	7	7	6	multi-exon	TRUE	canonical	3	670	junction_5	45.0653969249135	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGTGTATTTTTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	93988247	93863040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
Isoform_102276_11	chr2	-	1953	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	-59	8	-59	5	multi-exon	FALSE	canonical	3	670	junction_5	45.0653969249135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGTGTATTTTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	93988368	93863041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
Isoform_102280_322	chr2	-	4571	25	FSM	ENSMUSG00000027194.17	ENSMUST00000111238.8	4590	25	14	5	4	-5	multi-exon	TRUE	canonical	3	116	junction_1	40.2833497103814	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATTCCGTGGTGTAGT	NA	False	NA	-7	True	AATAAA	-16	NA	94237020	94131116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
Isoform_102282_11	chr2	-	4400	24	FSM	ENSMUSG00000027194.17	ENSMUST00000111237.9	4409	24	3	6	3	-6	multi-exon	FALSE	canonical	2	4	junction_8	56.2706462844556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTCCGTGGTGTAG	NA	False	NA	-8	True	AATAAA	-15	NA	94237021	94131117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
Isoform_102283_17	chr2	-	3512	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	13	-117	4	117	multi-exon	FALSE	canonical	3	95	junction_1	34.6292592408193	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCCTGTACCTCAAATG	NA	False	NA	NA	False	ATTAAA	-15	NA	94237020	94158164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
Isoform_102284_158	chr2	-	3413	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	4	-9	4	9	multi-exon	FALSE	canonical	3	95	junction_1	34.6292592408193	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATAAAAAGAAAGTGATC	NA	False	NA	NA	False	NA	NA	NA	94237029	94158272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
Isoform_102297_1793	chr2	-	3645	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	45	46	45	-46	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	-2	True	AATAAA	-18	NA	94268436	94242072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
Isoform_102299_71	chr2	-	1909	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	5	1822	5	-1822	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTCTGCAGCCTTGA	NA	False	NA	-7	True	NA	NA	NA	94268476	94243848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
Isoform_10230_26	chr10	+	2949	1	Intergenic	novelGene_1135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	93621516	93624465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_93621500_93624500
Isoform_102300_64	chr2	-	3708	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	-18	46	-18	-46	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	-2	True	AATAAA	-18	NA	94268499	94242072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
Isoform_102305_81	chr2	-	941	7	FSM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	-10	1342	9	1	multi-exon	FALSE	canonical	3	119	junction_5	14.4299072146089	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTCTGTGGAAATGTAC	NA	False	NA	-19	True	AATAAA	-16	NA	101459345	101392467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101459225
Isoform_102306_117	chr2	-	3810	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	23	0	-4	0	multi-exon	FALSE	canonical	3	53	junction_4	7.56306816047562	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGTGTGAATGGTTCT	NA	False	NA	-2	True	AATAAA	-18	NA	102016707	101780547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
Isoform_102310_10	chr2	-	3731	6	FSM	ENSMUSG00000048058.18	ENSMUST00000111222.2	3710	6	-19	-2	8	2	multi-exon	FALSE	canonical	2	7	junction_4	25.560907652116	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTGTGAATGGTTCTTA	NA	False	NA	0	True	AATAAA	-20	NA	102016722	101780545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943973_101944025_102016624
Isoform_102314_41	chr2	-	5905	5	FSM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	-295	2	-295	-2	multi-exon	FALSE	canonical	3	89	junction_4	8.0156097709407	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTCTCTCAGAGTTGT	NA	False	NA	-2	True	AATAAA	-17	NA	102231540	102130465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_102134850_102177308_102177329_102187761_102188002_102211208_102211287_102230357
Isoform_10232_94	chr10	+	2915	1	Intergenic	novelGene_1136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	93621550	93624465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_93621600_93624500
Isoform_102321_4	chr2	-	2399	3	ISM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	-295	56400	-295	924	5prime_fragment	FALSE	canonical	3	89	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTTGAGCATGTCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	102231540	102186863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_102188002_102211208_102211287_102230357
Isoform_102324_340	chr2	-	1750	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	39	717	-12	-717	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTGGTTCATTTG	NA	False	NA	0	True	ATTAAA	-16	NA	102903819	102852136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
Isoform_102325_175	chr2	-	2467	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	39	0	-12	0	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGATATGACATGCAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	102903819	102851419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
Isoform_102331_12	chr2	-	1803	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	-14	717	-14	-717	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTGGTTCATTTG	NA	False	NA	0	True	ATTAAA	-16	NA	102903872	102852136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
Isoform_102336_7	chr2	-	1062	5	FSM	ENSMUSG00000010914.11	ENSMUST00000111183.2	2078	5	-13	1029	-13	-1029	multi-exon	FALSE	canonical	3	362	junction_1	7.44983221287567	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	102903820	102870992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
Isoform_10234_7	chr10	+	412	1	Intergenic	novelGene_1137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGACACATACCG	NA	False	NA	NA	False	NA	NA	NA	93637878	93638290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_93637900_93638300
Isoform_102346_1302	chr2	-	2412	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	44	157	9	-157	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGACCGTGTTTGGTTG	NA	False	NA	-12	True	AATAAA	-12	NA	103315461	103284350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
Isoform_102348_272	chr2	-	2440	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	16	157	16	-157	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGACCGTGTTTGGTTG	NA	False	NA	-12	True	AATAAA	-12	NA	103315489	103284350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
Isoform_102368_757	chr2	-	3804	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	73	2	0	-2	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591542	103551602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
Isoform_102369_140	chr2	-	3868	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	9	2	0	-2	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591606	103551602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
Isoform_102377_33	chr2	-	4163	28	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	271	junction_24	29.0992813585317	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591544	103551602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
Isoform_102428_1081	chr2	-	4041	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	33	-5	33	5	multi-exon	FALSE	canonical	3	1559	junction_1	126.714184008996	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627416	103595357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
Isoform_102434_91	chr2	-	4080	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	-6	-5	-6	5	multi-exon	FALSE	canonical	3	1559	junction_1	126.714184008996	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627455	103595357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
Isoform_10244_3	chr10	+	150	1	Intergenic	novelGene_1138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGATATATAAGCC	NA	False	NA	NA	False	NA	NA	NA	93717621	93717771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_93717600_93717800
Isoform_102462_701	chr2	-	4073	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	24	2072	24	5	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627970	103595357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
Isoform_102494_111	chr2	-	3492	17	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	29	2090	29	-1	5prime_fragment	FALSE	canonical	3	1726	junction_3	108.266742354243	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAGTACTGGTGGAA	NA	False	NA	-10	True	NA	NA	NA	103627420	103597452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
Isoform_102495_370	chr2	-	3437	17	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	84	2090	-47	-1	5prime_fragment	FALSE	canonical	3	1726	junction_3	108.266742354243	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAGTACTGGTGGAA	NA	False	NA	-10	True	NA	NA	NA	103627365	103597452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
Isoform_102499_171	chr2	-	3533	18	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	8	4170	8	-4	5prime_fragment	FALSE	canonical	3	761	junction_17	279.160307903274	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGAGTACTGGTG	NA	False	NA	-13	True	NA	NA	NA	103627986	103597455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
Isoform_10250_3	chr10	+	2494	1	Genic_Genomic	ENSMUSG00000005897.15	novel	NA	NA	NA	NA	-80	-44915	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	93983804	93986298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_93983800_93986300
Isoform_102506_4	chr2	-	3181	7	ISM	ENSMUSG00000068373.16	ENSMUST00000136156.9	10127	21	208944	3968	39793	-3968	3prime_fragment	FALSE	canonical	0	0	junction_5	1.77169096878911	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATATGGTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	104031735	103977385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_103979408_103983276_103983429_103985254_103985404_103987127_103987226_103998182_103998534_104022779_104022910_104031456
Isoform_102509_27	chr2	-	7527	16	FSM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	-75	2	-75	-2	multi-exon	FALSE	canonical	3	39	junction_7	6.77446184824546	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTTGCTGGCTTTTTT	NA	False	NA	-3	True	ATTAAA	-18	NA	104324866	104256827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
Isoform_102510_17	chr2	-	7583	16	FSM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	-132	3	-132	-3	multi-exon	FALSE	canonical	3	39	junction_7	6.77446184824546	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGCTGGCTTTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	104324923	104256828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
Isoform_102513_7	chr2	-	7537	16	NNC	ENSMUSG00000027177.15	novel	7454	16	NA	NA	-89	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	9.18114008897225	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGCTGGCTTTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	104324880	104256828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265060_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
Isoform_102515_4	chr2	-	5482	10	FSM	ENSMUSG00000027175.11	ENSMUST00000111118.8	5474	10	-9	1	1	-1	multi-exon	TRUE	canonical	1	1	junction_6	48.9330608530107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCTGTAGAATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	104542510	104508362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_104512304_104514438_104514612_104515707_104515890_104518722_104518920_104520838_104520976_104527854_104528076_104528879_104529001_104530186_104530320_104536700_104536888_104542320
Isoform_102516_44	chr2	-	637	3	FSM	ENSMUSG00000027175.11	ENSMUST00000132600.2	630	3	1	-8	1	8	multi-exon	FALSE	canonical	3	159	junction_2	0.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGAAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	104542510	104535286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_104535547_104536700_104536888_104542320
Isoform_102517_235	chr2	-	1726	9	FSM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	71	4	71	-4	multi-exon	FALSE	canonical	3	114	junction_7	14.7394029729837	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTACTCAGAATGG	NA	False	NA	-13	True	AATAAA	-20	NA	104573152	104552132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558556_104560528_104560920_104573026
Isoform_102520_14	chr2	-	6473	12	FSM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-234	2798	-234	-2798	multi-exon	FALSE	canonical	3	14	junction_3	32.5683007674032	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTTGATTTATAACTGA	NA	False	NA	NA	False	AATAAA	-15	NA	104647339	104587937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104600387_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
Isoform_102523_11	chr2	-	5171	8	ISM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-229	15185	-229	-15185	5prime_fragment	FALSE	canonical	3	39	junction_1	21.0877660635502	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTATTTTGTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	104647334	104600324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
Isoform_102527_3	chr2	-	1916	6	FSM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	108	848	108	-848	multi-exon	FALSE	canonical	1	4	junction_1	3.61109401705356	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCGGCACTCGATAC	NA	False	NA	NA	False	NA	NA	NA	104680113	104661933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
Isoform_102539_1562	chr2	-	1228	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	53	2	16	1	multi-exon	FALSE	canonical	3	1722	junction_10	235.400531010446	1562	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGACTAATCTAGCTAA	2693	False	NA	-18	True	AGTAAA	-15	NA	104847372	104830002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
Isoform_10254_54	chrX	+	167	1	Intergenic	novelGene_11827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAGAAATATC	4768	False	NA	NA	False	NA	NA	NA	7779543	7779710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_7779500_7779700
Isoform_102552_1388	chr2	-	2169	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-86	637	-86	1	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTCTTGTGGTGTT	NA	False	NA	-3	True	AATAAA	-20	NA	105229750	105217272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
Isoform_102555_106	chr2	-	3143	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-85	-338	-85	338	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTCTTTGGTCATGGT	NA	False	NA	-5	True	NA	NA	NA	105229749	105216297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
Isoform_10256_14	chr10	-	178	1	Intergenic	novelGene_1139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATAGTAAAAACT	NA	False	NA	NA	False	NA	NA	NA	94813031	94812853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_94812900_94813000
Isoform_10257_3	chr10	-	244	1	Intergenic	novelGene_1140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	94904865	94904621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_94904600_94904900
Isoform_102574_64	chr2	-	2992	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	59	-3	-22	3	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTCTTACCCTGTTG	NA	False	NA	-1	True	AATAAA	-33	NA	105734850	105531368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
Isoform_102577_193	chr2	-	1572	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	59	1417	-22	-1417	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATACAGTTTGCCTTAG	NA	False	NA	NA	False	AATAAA	-16	NA	105734850	105532788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
Isoform_102579_4	chr2	-	6695	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	60	-3707	-21	3707	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCATGGTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	105734849	105527664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
Isoform_10258_34	chr10	-	180	1	Intergenic	novelGene_1141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95056393	95056213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_95056200_95056400
Isoform_102584_63	chr2	-	896	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	293	8	7	-8	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAGGTAAGAGTATT	NA	False	NA	-7	True	TATAAA	-11	NA	105833601	105797061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
Isoform_102585_22	chr2	-	1265	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	311	-379	25	379	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTGAGCCCAGTTC	NA	False	NA	NA	False	NA	NA	NA	105833583	105796674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
Isoform_102588_4	chr2	-	2839	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	293	-1935	7	1935	multi-exon	TRUE	canonical	3	201	junction_2	6.37867541108654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGGAAGAACCAATGTC	NA	False	NA	NA	False	NA	NA	NA	105833601	105795118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
Isoform_102589_4	chr2	-	2402	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	292	-1497	6	1497	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCCCTTTTCCTTTT	NA	False	NA	NA	False	AATACA	-35	NA	105833602	105795556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
Isoform_10259_4	chr10	+	1947	1	Intergenic	novelGene_1142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTACATTATGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	95139869	95141816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_95139900_95141800
Isoform_102591_3	chr2	-	740	4	FSM	ENSMUSG00000027166.15	ENSMUST00000124163.8	697	4	25	-68	25	-7	multi-exon	FALSE	canonical	3	9	junction_2	95.3496489534993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGGTAAGAGTATTC	NA	False	NA	-6	True	TATAAA	-12	NA	105833583	105797060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105797440_105800792_105800862_105832273_105832421_105833438
Isoform_102592_3	chr2	-	827	4	NIC	ENSMUSG00000027166.15	novel	1197	5	NA	NA	6	-9	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	89.3395520223577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAATCAGGTAAGAGTAT	NA	False	NA	-8	True	TATAAA	-10	NA	105833602	105797062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_105797440_105811326_105811466_105832273_105832421_105833438
Isoform_102597_35	chr2	-	3293	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	35	9	8	-9	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAATGCAGACTTAC	NA	False	NA	NA	False	AATAAA	-10	NA	106804734	106792880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
Isoform_102598_5	chr2	-	3395	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	-61	3	-61	-3	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCAGACTTACTGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	106804830	106792874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
Isoform_102603_19	chr2	-	3263	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_4	54.0046294311886	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAATGCAGACTTACT	NA	False	NA	NA	False	AATAAA	-11	NA	106804733	106792879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804646
Isoform_102607_23	chr2	-	3830	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	23	-8	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAATGCAGACTTACT	NA	False	NA	NA	False	AATAAA	-11	NA	106804719	106792879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
Isoform_102609_18	chr2	-	3740	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	2	-89	intron_retention	FALSE	canonical	3	134	junction_3	55.0292851327566	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCAGGCTTACTGTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	106804740	106792960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804646
Isoform_10261_3	chr10	-	2663	1	NIC	ENSMUSG00000045867.11	novel	1661	3	NA	NA	0	302	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAACAACAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	95159970	95157307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_95157300_95160000
Isoform_102610_24	chr2	-	1927	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	8	6	intron_retention	FALSE	canonical	3	134	junction_3	55.0292851327566	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTAATTTTCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	106804734	106794767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804646
Isoform_102613_60	chr2	-	1882	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	10	2	0	1	multi-exon	FALSE	canonical	3	30	junction_4	7.25534285888682	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	109108625	108922643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
Isoform_102614_3	chr2	-	1913	6	NIC	ENSMUSG00000057234.10	novel	1894	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	18.3891272223561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATTTATTTATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	109111071	108922642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109110953
Isoform_102615_5	chr2	-	1813	6	NIC	ENSMUSG00000057234.10	novel	2018	7	NA	NA	74	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	18.3891272223561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	109110973	108922644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109110953
Isoform_102618_783	chr2	-	948	5	FSM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	24	11	17	-11	multi-exon	FALSE	canonical	3	778	junction_3	24.5395089600424	783	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTAATGTTTCACAAGT	5021	False	NA	-16	True	AATAAA	-18	NA	112198348	112193366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_112193700_112194136_112194298_112194496_112194651_112197746_112197862_112198163
Isoform_10262_3	chr10	-	2726	1	Genic_Genomic	ENSMUSG00000045867.11	novel	NA	NA	NA	NA	-37	303	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAACAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	95160032	95157306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_95157300_95160000
Isoform_102624_4	chr2	-	7697	11	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-54	-50	-49	-1	intron_retention	FALSE	canonical	3	279	junction_2	48.9693781867812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGTCTTGTCTGCGTGT	5963	False	NA	-8	True	ATTAAA	-13	NA	113679055	113661840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
Isoform_102626_228	chr2	-	5064	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-55	-51	-50	0	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5962	False	NA	-7	True	ATTAAA	-14	NA	113679056	113661839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
Isoform_102627_7	chr2	-	6508	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-21	-1529	-16	1475	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATGAATCGTACAGTTT	5996	False	NA	NA	False	AATAAA	-28	NA	113679022	113660361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
Isoform_10263_5	chr10	-	2152	1	NIC	ENSMUSG00000045867.11	novel	1661	3	NA	NA	-31	303	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAACAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	95159458	95157306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_95157300_95159500
Isoform_102633_4	chr2	-	5180	13	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	-63	0	intron_retention	FALSE	canonical	2	5	junction_12	140.185863727014	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5949	False	NA	-7	True	ATTAAA	-14	NA	113679069	113661839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113676913_113677017_113678305
Isoform_102634_4	chr2	-	4926	11	FSM	ENSMUSG00000041219.15	ENSMUST00000110948.8	4878	11	-50	2	-50	1	multi-exon	FALSE	canonical	3	16	junction_1	114.655832821536	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTCTTGTCTGCGTGTTG	5962	False	NA	-6	True	ATTAAA	-15	NA	113679056	113661838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
Isoform_10264_5	chr10	+	159	1	Intergenic	novelGene_1143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGCTTTACAGCATAC	NA	False	NA	NA	False	NA	NA	NA	95173527	95173686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_95173500_95173700
Isoform_102649_589	chr2	-	4850	35	FSM	ENSMUSG00000040383.17	ENSMUST00000043160.13	4888	35	34	4	-28	-4	multi-exon	FALSE	canonical	3	207	junction_21	28.9958832539162	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTAAGGCATACTTGC	7843	False	NA	-7	True	ATTAAA	-15	NA	114005786	113931654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
Isoform_10265_46	chr10	+	240	1	Intergenic	novelGene_1144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAATACTTTTG	3186	False	NA	NA	False	NA	NA	NA	95183521	95183761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_95183500_95183800
Isoform_102653_10	chr2	-	4341	34	FSM	ENSMUSG00000040383.17	ENSMUST00000102543.5	4352	34	-28	39	-28	-39	multi-exon	FALSE	canonical	2	4	junction_1	51.8196880872694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACTCAGTAAAACTAT	7843	False	NA	NA	False	AATAAA	-15	NA	114005786	113935681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_113935843_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
Isoform_102655_7	chr2	-	1077	9	FSM	ENSMUSG00000040383.17	ENSMUST00000131785.8	3112	9	15	2020	15	-2020	multi-exon	FALSE	canonical	3	222	junction_1	25.6307920283397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTATTTCGTTAGTAA	7825	False	NA	NA	False	ATTAAA	-19	NA	114005804	113985243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
Isoform_102657_12	chr2	-	4260	2	FSM	ENSMUSG00000040321.4	ENSMUST00000050668.4	4300	2	39	1	10	-1	multi-exon	FALSE	canonical	3	9	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGAGATTTTGTTTGGTG	NA	False	NA	-5	True	AATAAA	-24	NA	114031911	114023942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_114028109_114031817
Isoform_102658_11	chr2	-	4358	3	NNC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGAGATTTTGTTTGGTG	NA	False	NA	-5	True	AATAAA	-24	NA	114031911	114023942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_114028109_114031435_114031534_114031817
Isoform_102659_3	chr2	-	4534	3	NNC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	11	176	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGCATTTTTTAAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	114031910	114023765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_114028109_114031435_114031534_114031817
Isoform_10266_3	chr10	+	790	1	NIC	ENSMUSG00000100550.3	novel	642	3	NA	NA	3101	-4431	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95193850	95194640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_95193800_95194600
Isoform_102661_16	chr2	-	2492	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	12	230	1	-6	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114485433	114347130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
Isoform_102662_66	chr2	-	2697	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	38	-1	-21	1	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTTTGTGTGAATGTCA	NA	False	NA	-5	True	NA	NA	NA	114485407	114346899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
Isoform_102664_103	chr2	-	2650	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	85	-1	8	1	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTTTGTGTGAATGTCA	NA	False	NA	-5	True	NA	NA	NA	114485360	114346899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
Isoform_102670_4	chr2	-	2958	13	FSM	ENSMUSG00000027210.21	ENSMUST00000074285.8	2844	13	112	-226	68	-10	multi-exon	FALSE	canonical	0	0	junction_3	17.4825309634758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTAGGCTTTGGTG	NA	False	NA	-6	True	AATAAA	-15	NA	115894881	115693554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
Isoform_102671_3	chr2	-	3682	13	FSM	ENSMUSG00000027210.21	ENSMUST00000110908.9	3697	13	10	5	10	-5	multi-exon	FALSE	canonical	0	0	junction_3	17.8535710713571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	115896310	115693549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
Isoform_102673_3	chr2	-	2675	12	NIC	ENSMUSG00000027210.21	novel	2844	13	NA	NA	253	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	17.807046613375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTGTTAGGCTTTG	NA	False	NA	-9	True	AATAAA	-12	NA	115894696	115693557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
Isoform_102674_3	chr2	-	2162	9	NNC	ENSMUSG00000027210.21	novel	2810	12	NA	NA	-1343	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.840479417035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTAGGCTTTGGT	3886	False	NA	-7	True	AATAAA	-14	NA	115890666	115693555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115890631
Isoform_102675_3	chr2	-	2894	12	NIC	ENSMUSG00000027210.21	novel	3229	13	NA	NA	68	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	17.807046613375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGTGTTTTTTAATG	NA	False	NA	4	True	AATAAA	-25	NA	115894881	115693544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
Isoform_102676_3	chr2	-	3621	12	FSM	ENSMUSG00000027210.21	ENSMUST00000028639.13	2831	12	-795	5	-3	-5	multi-exon	FALSE	canonical	0	0	junction_2	18.227216050694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	115896323	115693549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
Isoform_10268_26	chr10	-	4736	1	Antisense	novelGene_ENSMUSG00000019808.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7861	False	NA	NA	False	NA	NA	NA	13438289	13433553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_13433600_13438300
Isoform_102680_14	chr2	-	2862	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	40	-2104	-23	2104	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTGCTTGTTTGAT	NA	False	NA	NA	False	AGTAAA	-11	NA	118310152	118304226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
Isoform_102681_826	chr2	-	758	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	40	0	-23	0	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGTTTGTTTTTCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	118310152	118306330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
Isoform_102685_11	chr2	-	4660	5	FSM	ENSMUSG00000040093.17	ENSMUST00000090219.13	4642	5	-25	7	-25	-7	multi-exon	FALSE	canonical	2	4	junction_1	1.11803398874989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGATCTGTTCTTTATT	NA	False	NA	-6	True	AATAAA	-9	NA	118380193	118359244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_118363141_118375562_118375727_118377196_118377494_118379521_118379652_118380020
Isoform_102690_3	chr2	-	4479	5	NNC	ENSMUSG00000040093.17	novel	4642	5	NA	NA	-38085	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.06155281280883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTTCTTTATTTTTTC	NA	False	NA	-1	True	AATAAA	-14	NA	118418253	118359239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_118363141_118375562_118375727_118377196_118377494_118417978_118418029_118418186
Isoform_102691_5	chr2	-	1875	4	NIC	ENSMUSG00000039983.14	novel	1870	4	NA	NA	-5	7	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	18.6726180988812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGATTTTCTGATTTTC	NA	False	NA	NA	False	NA	NA	NA	118859863	118848252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_118849646_118852549_118852707_118857618_118857869_118859788
Isoform_102692_11	chr2	-	1467	4	NIC	ENSMUSG00000039983.14	novel	1870	4	NA	NA	14	-382	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	18.6726180988812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTGTAGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-15	NA	118859844	118848641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_118849646_118852549_118852707_118857618_118857869_118859788
Isoform_102694_33	chr2	-	1461	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	27	382	11	-382	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTGTAGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-15	NA	118859847	118848641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
Isoform_102695_7	chr2	-	1867	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	10	-7	-6	7	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGATTTTCTGATTTTC	NA	False	NA	NA	False	NA	NA	NA	118859864	118848252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
Isoform_102698_682	chr2	-	2175	13	FSM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	75	-1	5	1	multi-exon	TRUE	canonical	3	215	junction_12	29.1989107483291	682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGACTGTTTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	118987440	118967480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
Isoform_102701_219	chr2	-	1002	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	0	6	0	-6	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTCTACTTTTCTTC	NA	False	NA	-10	True	AATAAA	-9	NA	119039276	119002986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
Isoform_102702_27	chr2	-	1064	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	-64	8	-64	-8	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACAGTCTACTTTTCT	NA	False	NA	-12	True	AATAAA	-7	NA	119039340	119002988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
Isoform_102703_3	chr2	-	1239	12	NNC	ENSMUSG00000034278.4	novel	1008	11	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	116.975733868395	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTCTACTTTTCTTC	NA	False	NA	-10	True	AATAAA	-9	NA	119039282	119002986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_119003167_119005391_119005623_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
Isoform_102704_17	chr2	-	753	4	FSM	ENSMUSG00000027317.9	ENSMUST00000076084.6	787	4	33	1	-8	-1	multi-exon	FALSE	canonical	3	35	junction_3	4.96655480858378	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGGAGTGTGGTGTGTA	NA	False	NA	NA	False	GATAAA	-17	NA	119060354	119048600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022
Isoform_102705_10	chr2	-	800	4	FSM	ENSMUSG00000027317.9	ENSMUST00000076084.6	787	4	-14	1	-14	-1	multi-exon	FALSE	canonical	3	35	junction_3	4.96655480858378	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGGAGTGTGGTGTGTA	NA	False	NA	NA	False	GATAAA	-17	NA	119060401	119048600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022
Isoform_102707_3	chr2	-	1203	5	NNC	ENSMUSG00000027317.9	novel	790	5	NA	NA	-7356	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	17.007351351695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGGGAGTGTGGTGTGT	NA	False	NA	NA	False	GATAAA	-16	NA	119067743	119048601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022_119060323_119067260
Isoform_102709_44	chr2	-	1727	4	NNC	ENSMUSG00000034226.8	novel	1703	3	NA	NA	-6715	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	7.54247233265651	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTCTGTGGTCTCC	4290	False	NA	-6	True	AATAAA	-16	NA	119108468	119099682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_119100969_119101162_119101222_119101396_119101722_119108411
Isoform_102728_13	chr2	-	6290	36	FSM	ENSMUSG00000034154.16	ENSMUST00000049920.14	6354	36	61	3	-13	-3	multi-exon	TRUE	canonical	3	19	junction_35	12.9307732931632	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAAAGTGTCTGTGGTC	NA	False	NA	-3	True	AATAAA	-23	NA	119308107	119203525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119205063_119207827_119208044_119210043_119210204_119210446_119210603_119212390_119212480_119213344_119213448_119213830_119213990_119223333_119223407_119232810_119232906_119237296_119237425_119242882_119243109_119248801_119248943_119254085_119254258_119255739_119255834_119256185_119256254_119257069_119257204_119257380_119257549_119258957_119259044_119261468_119261587_119262408_119262494_119263671_119263815_119264629_119264690_119269855_119269952_119272093_119272175_119272863_119273074_119274927_119274996_119275941_119276138_119277336_119277541_119278685_119278740_119280483_119280699_119281810_119281932_119284536_119284699_119286865_119286934_119287052_119287223_119288561_119288748_119307859
Isoform_10273_3	chr10	+	2131	1	Genic_Genomic	ENSMUSG00000097766.2	novel	NA	NA	NA	NA	-1638	-10773	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAGAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	95251598	95253729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_95251600_95253700
Isoform_102731_13	chr2	-	2591	13	NNC	ENSMUSG00000048647.10	novel	6042	13	NA	NA	216	-2889	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3.89087250997625	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGAGGTGTTACACTTC	NA	False	NA	NA	False	AGTAAA	-26	NA	119377459	119349880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_119350434_119350464_119351207_119354003_119354196_119355052_119355197_119359164_119359246_119359326_119359432_119360569_119360657_119363922_119363982_119369228_119369357_119369603_119369659_119370504_119370574_119371839_119372026_119377269
Isoform_102734_539	chr2	-	1562	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	-19	-461	-19	2	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTG	7461	False	NA	NA	False	NA	NA	NA	119448969	119439990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
Isoform_102740_42	chr2	-	1439	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-19	2	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTG	7461	False	NA	NA	False	NA	NA	NA	119448969	119439990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
Isoform_102743_29	chr2	-	1471	5	NIC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	131.115407180087	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493278	119485926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493073
Isoform_102744_130	chr2	-	1454	5	FSM	ENSMUSG00000027305.10	ENSMUST00000028768.2	1451	5	1	-4	1	-1	multi-exon	FALSE	canonical	3	141	junction_4	75.083287088406	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGCCTTTTTCTGCT	NA	False	NA	-2	True	AATAAA	-20	NA	119493278	119485927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
Isoform_102746_8	chr2	-	1311	5	NIC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	1	8	junction_4	132.411055052061	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACCCTCAGCCTTTTTCT	NA	False	NA	-5	True	AATAAA	-17	NA	119493288	119485930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493239
Isoform_102747_116	chr2	-	1303	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	5	0	-4	0	multi-exon	FALSE	canonical	3	109	junction_4	88.8453712919249	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493297	119485926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
Isoform_102748_5	chr2	-	1277	4	NIC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	127.452823516085	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCAGCCTTTTTCTGC	NA	False	NA	-3	True	AATAAA	-19	NA	119493288	119485928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119486274_119486848_119486924_119490482_119491141_119493089
Isoform_102749_7	chr2	-	1128	4	NIC	ENSMUSG00000027305.10	novel	1308	5	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	130.10337769977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCAGCCTTTTTCTGC	NA	False	NA	-3	True	AATAAA	-19	NA	119493310	119485928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119486274_119486848_119486924_119490482_119491141_119493260
Isoform_10275_4	chr10	-	4441	1	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	25	-11443	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTAATTATTCTTAAT	1578	False	NA	NA	False	NA	NA	NA	95297061	95292620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_95292600_95297100
Isoform_102750_11	chr2	-	2418	15	ISM	ENSMUSG00000027297.16	ENSMUST00000028759.13	3080	20	1910	-5	0	-1	3prime_fragment	FALSE	canonical	3	7	junction_14	8.0156097709407	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCTGAGTGAATGTG	NA	False	NA	-5	True	NA	NA	NA	119589002	119581801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459_119588643_119588727
Isoform_102751_25	chr2	-	2229	14	FSM	ENSMUSG00000027297.16	ENSMUST00000182203.3	2232	14	2	1	-2	-1	multi-exon	FALSE	canonical	3	10	junction_7	7.17243243134772	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTCAGTTCTCTGAG	NA	False	NA	-13	True	NA	NA	NA	119589004	119581809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
Isoform_102753_4	chr2	-	2268	14	NIC	ENSMUSG00000027297.16	novel	3080	20	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	9.68070123138613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTCAGTTCTCTGAGTG	NA	False	NA	-11	True	NA	NA	NA	119588993	119581807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119582416_119582546_119582638_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459_119588643_119588727
Isoform_102754_5	chr2	-	2091	13	NIC	ENSMUSG00000027297.16	novel	2240	14	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	9.17423929634859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTCAGTTCTCTGAG	NA	False	NA	-13	True	NA	NA	NA	119589001	119581809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119582416_119582546_119582638_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
Isoform_102755_3	chr2	-	2793	15	NIC	ENSMUSG00000027297.16	novel	3080	20	NA	NA	-390	-1	intron_retention	FALSE	canonical	0	0	junction_13	10.5133539959852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTCTTCAGTTCTCTG	NA	False	NA	-15	True	NA	NA	NA	119589396	119581811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119582416_119582546_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459_119588643_119588727_119588885_119589004_119589143_119589236
Isoform_102756_6	chr2	-	2708	10	NIC	ENSMUSG00000027297.16	novel	3080	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_9	5.33333333333333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGTTCTCTGAGTGA	NA	False	NA	-10	True	NA	NA	NA	119589002	119581806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119582416_119582546_119583080_119583175_119583269_119583406_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
Isoform_10278_30	chr10	-	177	1	Intergenic	novelGene_1145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95341115	95340938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_95340900_95341100
Isoform_102794_18	chr2	-	4906	25	ISM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	20	4	-4	0	intron_retention	FALSE	canonical	3	165	junction_24	62.6318470419713	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701
Isoform_102796_286	chr2	-	4789	26	FSM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	20	4	-4	0	multi-exon	FALSE	canonical	3	111	junction_25	84.4691091464803	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
Isoform_102798_242	chr2	-	4769	26	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_25	88.1886704741601	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
Isoform_102799_375	chr2	-	4712	25	FSM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	29	3	-4	0	multi-exon	FALSE	canonical	3	120	junction_24	70.0848691865005	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
Isoform_10280_3	chr10	-	230	1	Intergenic	novelGene_1146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCTCTTCAAAGTACCA	NA	False	NA	NA	False	NA	NA	NA	95371972	95371742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_95371700_95372000
Isoform_102801_146	chr2	-	4691	25	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_24	80.8678191041818	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	493	False	NA	-6	True	AATAAA	-16	NA	119617989	119594444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
Isoform_102812_545	chr2	-	3414	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	4	312	4	-312	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTGAGTCTGTCTCT	NA	False	NA	-9	True	AATATA	-13	NA	119985083	119919967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
Isoform_102817_55	chr2	-	3707	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	23	0	23	0	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCACAGTTCCTAGAC	NA	False	NA	NA	False	AATAAA	-20	NA	119985064	119919655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
Isoform_102823_6	chr2	-	4377	20	FSM	ENSMUSG00000050211.15	ENSMUST00000090071.5	4477	20	99	1	99	-1	multi-exon	FALSE	canonical	0	0	junction_19	6.9306017774238	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGGTTCATCTGTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	120075717	119996893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166
Isoform_102824_15	chr2	-	4231	20	FSM	ENSMUSG00000050211.15	ENSMUST00000090071.5	4477	20	243	3	-10	-3	multi-exon	FALSE	canonical	0	0	junction_19	6.9306017774238	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATTGGTTCATCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	120075573	119996895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166
Isoform_102826_6	chr2	-	4300	20	FSM	ENSMUSG00000050211.15	ENSMUST00000090071.5	4477	20	173	4	-54	-4	multi-exon	FALSE	canonical	0	0	junction_19	6.9306017774238	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATTGGTTCATCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	120075643	119996896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166
Isoform_102827_10	chr2	-	971	2	ISM	ENSMUSG00000046971.8	ENSMUST00000142183.2	2610	15	11172	10	11172	-1	3prime_fragment	FALSE	canonical	2	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGTCACTGAGCCTG	5920	False	NA	NA	False	AATAAA	-21	NA	120131686	120130447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_120131110_120131377
Isoform_102828_6	chr2	-	1547	6	ISM	ENSMUSG00000046971.8	ENSMUST00000054651.8	3116	20	10717	-10	8929	1	3prime_fragment	FALSE	canonical	2	5	junction_5	3.9293765408777	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCCTGTGTTCTGGTTC	3677	False	NA	NA	False	AATAAA	-32	NA	120133929	120130436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_120131110_120131377_120131565_120132677_120132845_120133207_120133424_120133547_120133656_120133733
Isoform_102829_3	chr2	-	1423	5	NIC	ENSMUSG00000046971.8	novel	3116	20	NA	NA	8935	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	4.76313972081441	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCACTGAGCCTGT	3683	False	NA	NA	False	AATAAA	-22	NA	120133923	120130446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120131110_120131377_120131565_120132677_120132845_120133207_120133424_120133733
Isoform_102835_522	chr2	-	4197	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	5	137	1	-137	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGCATACTTAATTC	NA	False	NA	-17	True	AATAAA	-19	NA	120183601	120147078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
Isoform_102837_71	chr2	-	4332	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	5	2	1	-2	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCCTTGAGCCTCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	120183601	120146943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
Isoform_102839_12	chr2	-	4132	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-137	combination_of_known_splicesites	FALSE	canonical	2	9	junction_22	62.9448403767673	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGCATACTTAATTC	NA	False	NA	-17	True	AATAAA	-19	NA	120183601	120147078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120180644_120180711_120183395
Isoform_102841_9	chr2	-	4296	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	intron_retention	FALSE	canonical	3	237	junction_14	26.0337863943466	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183601	120147079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120148591_120149946_120150039_120151132_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
Isoform_102843_10	chr2	-	2875	21	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	0	1	intron_retention	TRUE	non_canonical	0	0	junction_1	132.468147114693	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGTGTCTCTCTCATT	NA	False	NA	NA	False	TATAAA	-11	NA	120234576	120185795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_120185973_120185995_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204390_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
Isoform_10288_16	chr10	+	176	1	Intergenic	novelGene_1147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATACTGTCCAA	NA	False	NA	NA	False	NA	NA	NA	95487405	95487581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_95487400_95487600
Isoform_10289_3	chr10	-	175	1	Intergenic	novelGene_1148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	95520722	95520547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_95520500_95520700
Isoform_102902_459	chr2	-	9106	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-23	2	4	-2	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9798	False	NA	-8	True	AATAAA	-19	NA	120394311	120337302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
Isoform_102906_58	chr2	-	9134	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-51	2	-15	-2	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9770	False	NA	-8	True	AATAAA	-19	NA	120394339	120337302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
Isoform_102915_366	chr2	-	6730	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9807	False	NA	-8	True	AATAAA	-19	NA	120394302	120337302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
Isoform_102916_21	chr2	-	6766	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	9769	False	NA	-10	True	AATAAA	-17	NA	120394340	120337304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
Isoform_10292_4	chr10	-	172	1	Intergenic	novelGene_1149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95690101	95689929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_95689900_95690100
Isoform_102921_162	chr2	-	4402	10	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-31	19443	-4	0	5prime_fragment	FALSE	canonical	3	679	junction_5	193.010522325585	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTTCATTGTTCCCT	9790	False	NA	-3	True	AATAAA	-43	NA	120394319	120356743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
Isoform_102923_32	chr2	-	2030	8	NIC	ENSMUSG00000027288.17	novel	4375	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	389	junction_5	258.657365356298	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTTCATTGTTCCCT	9795	False	NA	-3	True	AATAAA	-43	NA	120394314	120356743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
Isoform_102929_80	chr2	-	2747	5	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-11	26590	-4	-1524	5prime_fragment	FALSE	canonical	3	681	junction_1	204.702680734767	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACCCATTGTAGATG	9810	False	NA	NA	False	ATTAAA	-37	NA	120394299	120363890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
Isoform_10293_5	chr10	+	177	1	Intergenic	novelGene_1150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTTTCGTAGCAT	1324	False	NA	NA	False	NA	NA	NA	95731659	95731836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_95731700_95731800
Isoform_102936_122	chr2	-	1960	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102497.10	1962	6	1	1	1	-1	multi-exon	FALSE	canonical	3	64	junction_5	44.5394207416307	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTGGAAGTAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	120439835	120434719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439595
Isoform_102938_10	chr2	-	1850	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102496.8	1848	6	-3	1	-3	-1	multi-exon	FALSE	canonical	1	2	junction_5	68.2800117164606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTGGAAGTAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	120439799	120434719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439669
Isoform_102939_107	chr2	-	1801	6	NIC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	69.0582362937253	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTGGAAGTAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	120439835	120434719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439754
Isoform_102940_56	chr2	-	1797	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	163	1	-2	-1	multi-exon	FALSE	canonical	3	29	junction_5	57.8321709777525	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTGGAAGTAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	120439838	120434719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
Isoform_102943_3	chr2	-	4346	27	ISM	ENSMUSG00000027284.17	ENSMUST00000110700.2	5996	28	202	1664	174	0	3prime_fragment	FALSE	canonical	3	17	junction_26	18.2134370710426	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6316	False	NA	NA	False	AATAAA	-15	NA	120561797	120548666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182
Isoform_102944_47	chr2	-	4334	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-4	1	combination_of_known_junctions	TRUE	canonical	3	17	junction_26	17.8771144441848	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTGTTCTCCCTGC	6110	False	NA	NA	False	AATAAA	-16	NA	120562003	120548665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561674_120561892
Isoform_102945_4	chr2	-	4380	27	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	145	2	combination_of_known_junctions	TRUE	canonical	3	36	junction_26	16.3125899757205	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTGTTCTCCCTGCT	6287	False	NA	NA	False	AATAAA	-17	NA	120561826	120548664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182
Isoform_102946_4	chr2	-	4555	27	NIC	ENSMUSG00000027284.17	novel	5996	28	NA	NA	-4	0	intron_retention	FALSE	canonical	3	36	junction_26	16.3125899757205	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6110	False	NA	NA	False	AATAAA	-15	NA	120562003	120548666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182
Isoform_102947_52	chr2	-	4336	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	16.0161955070022	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6110	False	NA	NA	False	AATAAA	-15	NA	120562003	120548666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182_120561674_120561892
Isoform_102948_3	chr2	-	4168	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_25	20.8385919289247	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTGTTCTCCCTGC	6106	False	NA	NA	False	AATAAA	-16	NA	120562007	120548665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560949_120560984_120561182_120561674_120561892
Isoform_102949_5	chr2	-	4165	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_25	19.309123482361	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6111	False	NA	NA	False	AATAAA	-15	NA	120562002	120548666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560949_120560987_120561182_120561674_120561892
Isoform_10295_26	chr10	+	182	1	Intergenic	novelGene_1151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAGAAA	NA	False	NA	NA	False	NA	NA	NA	96137307	96137489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_96137300_96137500
Isoform_102950_3	chr2	-	4363	27	NNC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_1	22.5376739164034	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6108	False	NA	NA	False	AATAAA	-15	NA	120562005	120548666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_120549408_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560949_120561674_120561892
Isoform_102951_3	chr2	-	4289	28	NIC	ENSMUSG00000027284.17	novel	8046	41	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_26	19.9782460566659	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTGTTCTCCCTGC	6108	False	NA	NA	False	AATAAA	-16	NA	120562005	120548665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553137_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561674_120561892
Isoform_102952_5	chr2	-	4291	28	NIC	ENSMUSG00000027284.17	novel	8046	41	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	18.4226406898219	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6108	False	NA	NA	False	AATAAA	-15	NA	120562005	120548666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553137_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182_120561674_120561892
Isoform_102953_4	chr2	-	4688	16	FSM	ENSMUSG00000090100.8	ENSMUST00000085840.11	11152	16	12	6452	0	6403	multi-exon	FALSE	canonical	3	12	junction_14	10.6048207067457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATTTGGTTTGTGTGTT	NA	False	NA	NA	False	AATATA	-32	NA	120680887	120569748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
Isoform_102955_4	chr2	-	4648	15	FSM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-33	6451	-4	6404	multi-exon	FALSE	canonical	3	11	junction_14	10.4060422008425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGGTTTGTGTGTTT	NA	False	NA	NA	False	AATATA	-33	NA	120680920	120569747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
Isoform_102956_3	chr2	-	11103	15	FSM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-32	-5	-3	5	multi-exon	FALSE	canonical	3	11	junction_14	10.4060422008425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATTTGTGTGATGGTT	NA	False	NA	8	True	AATAAA	-26	NA	120680919	120563291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
Isoform_102957_9	chr2	-	4004	15	FSM	ENSMUSG00000090100.8	ENSMUST00000143051.8	3093	15	-47	-864	-2	864	multi-exon	FALSE	canonical	3	12	junction_13	10.0369216355597	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTCATGTTAAGTGTC	NA	False	NA	NA	False	NA	NA	NA	120680918	120575287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
Isoform_102958_13	chr2	-	3935	14	ISM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-33	11988	-4	867	5prime_fragment	FALSE	canonical	3	11	junction_13	9.62676249904493	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATGTTAAGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	120680920	120575284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
Isoform_10296_6	chr10	-	175	1	Intergenic	novelGene_1152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGAACTTAAATC	1915	False	NA	NA	False	NA	NA	NA	96389792	96389617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_96389600_96389800
Isoform_102962_37	chr2	-	7705	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	49	14	26	-14	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAAAGGGACTTCT	NA	False	NA	NA	False	AATAAA	-23	NA	120801147	120690763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
Isoform_102963_14	chr2	-	7772	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	-19	15	-19	-15	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAAGGGACTTC	NA	False	NA	NA	False	AATAAA	-22	NA	120801215	120690764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
Isoform_102965_5	chr2	-	3476	29	ISM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	49	46381	26	-5056	5prime_fragment	FALSE	canonical	3	63	junction_1	8.50472557716339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATACTAGCTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	120801147	120737130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
Isoform_102970_3	chr2	-	5905	5	FSM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	-857	24	0	-24	multi-exon	FALSE	canonical	2	4	junction_2	14.6372811683044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAAGTGCTCTGTTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	121001606	120988777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120992031_120994227_120994684_120996524_120997200_120999679_120999885_121000290
Isoform_102971_78	chr2	-	2593	3	ISM	ENSMUSG00000050619.15	ENSMUST00000163766.8	3611	6	3	4948	3	-503	5prime_fragment	FALSE	canonical	3	33	junction_1	2	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGTTTTTCATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	121001603	120996124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_120997200_120999679_120999885_121000290
Isoform_102973_10	chr2	-	2388	2	FSM	ENSMUSG00000050619.15	ENSMUST00000146243.2	2894	2	3	503	3	-503	multi-exon	FALSE	canonical	2	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGTTTTTCATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	121001603	120996124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120997200_121000290
Isoform_102974_8	chr2	-	6204	28	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	35.2770341128966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8068	False	NA	-7	True	AATAAA	-24	NA	121101892	121028733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
Isoform_102978_171	chr2	-	6180	28	FSM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	26	3415	-11	-2	multi-exon	FALSE	canonical	3	115	junction_12	23.0142199734784	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8098	False	NA	-7	True	AATAAA	-24	NA	121101862	121028733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
Isoform_102980_12	chr2	-	9621	28	FSM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	2	-2	2	2	multi-exon	TRUE	canonical	3	115	junction_12	23.0142199734784	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTGTTCTAACGTGCT	8074	False	NA	NA	False	NA	NA	NA	121101886	121025316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
Isoform_102982_15	chr2	-	6061	27	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_15	36.7544426328905	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGATGTCTTCATCTGT	8098	False	NA	-6	True	AATAAA	-25	NA	121101862	121028732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
Isoform_102984_12	chr2	-	6098	27	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_12	35.4479366538837	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8089	False	NA	-5	True	AATAAA	-26	NA	121101871	121028731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
Isoform_102985_8	chr2	-	6053	27	FSM	ENSMUSG00000043909.17	ENSMUST00000110647.8	9405	27	-63	3415	3	-2	multi-exon	FALSE	canonical	3	11	junction_8	35.6224656526131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8075	False	NA	-7	True	AATAAA	-24	NA	121101885	121028733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
Isoform_102988_23	chr2	-	5715	32	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	19.1421648876737	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGGGGTGTGACTCCTT	NA	False	NA	-6	True	AATAAA	-16	NA	121185816	121141042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
Isoform_102989_5	chr2	-	5911	33	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_31	26.2627945009666	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTGACTCCTTTGTG	NA	False	NA	-2	True	AATAAA	-20	NA	121185816	121141038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763_121181956_121185781
Isoform_102992_32	chr2	-	5563	31	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	2	4	combination_of_known_junctions	TRUE	canonical	3	47	junction_6	18.7459328922303	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGTGACTCCTTTGTGA	NA	False	NA	-1	True	AATAAA	-21	NA	121185809	121141037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
Isoform_102994_5	chr2	-	3426	26	NIC	ENSMUSG00000033526.17	novel	3438	26	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	19.9040096462999	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCATGAGTCCAGG	NA	False	NA	NA	False	NA	NA	NA	121185813	121162555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
Isoform_102997_12	chr2	-	1419	10	ISM	ENSMUSG00000033526.17	ENSMUST00000150081.8	2485	18	-19	6703	0	-13	5prime_fragment	FALSE	canonical	3	56	junction_9	18.8017598335769	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGTTTTAAAATGA	NA	False	NA	NA	False	NA	NA	NA	121185811	121177541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
Isoform_102998_3	chr2	-	1550	7	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	5.52016505389306	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATTTCTGGTAAGTTC	NA	False	NA	NA	False	AATAAA	-10	NA	121244281	121224839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121224969_121227433_121227602_121227941_121228370_121236809_121236935_121240857_121241032_121242630_121242772_121243896
Isoform_102999_3	chr2	-	1162	4	ISM	ENSMUSG00000033486.15	ENSMUST00000038073.5	2247	13	4	15378	4	493	5prime_fragment	FALSE	canonical	3	12	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	121244269	121240213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_121240688_121240857_121241032_121242630_121242772_121243896
Isoform_103000_145	chr2	-	1666	11	FSM	ENSMUSG00000027246.13	ENSMUST00000116432.2	1674	11	10	-2	10	2	multi-exon	FALSE	canonical	3	70	junction_5	7.95235814082842	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCGATCATTAGCCT	NA	False	NA	-15	True	ATTAAA	-17	NA	121273072	121269505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
Isoform_103001_6	chr2	-	1775	10	NIC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	-26	0	intron_retention	FALSE	canonical	3	70	junction_4	8.33259255966786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCGATCATTAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	121273108	121269507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
Isoform_103002_3	chr2	-	1824	9	NIC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	4	2	intron_retention	FALSE	canonical	3	70	junction_3	8.70254991367473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCGATCATTAGCCT	NA	False	NA	-15	True	ATTAAA	-17	NA	121273078	121269505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121270153_121270328_121270501_121270596_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
Isoform_103006_198	chr2	-	2588	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	49	725	49	-725	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATGCAGTTCTTGAAGT	9244	False	NA	-8	True	AATAAA	-14	NA	121304499	121291440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
Isoform_103009_24	chr2	-	2774	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	49	539	49	-539	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAGCCACA	9244	False	NA	NA	False	NA	NA	NA	121304499	121291254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
Isoform_103022_119	chr2	-	3344	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	18	836	18	-836	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGATTTATTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	121337128	121323227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
Isoform_10303_5	chr10	-	205	1	Intergenic	novelGene_1153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATTTAGGTTAAATTCA	NA	False	NA	NA	False	AAAAAG	-23	NA	98724760	98724555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_98724600_98724800
Isoform_103034_22	chr2	-	5454	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	18	-1274	18	1274	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGCCAATGCACAG	NA	False	NA	NA	False	NA	NA	NA	121337128	121321117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
Isoform_103042_6	chr2	-	2122	15	NIC	ENSMUSG00000027238.18	novel	2222	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.04325043443386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGATTGCAGTAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	121637552	121378787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121379191_121379369_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138_121422244_121637210
Isoform_103043_13	chr2	-	2296	14	FSM	ENSMUSG00000027238.18	ENSMUST00000110592.2	2222	14	-74	0	-9	0	multi-exon	FALSE	canonical	2	7	junction_6	7.44049371651923	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGATTGCAGTAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	121637547	121378787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138_121422244_121637210
Isoform_103045_9	chr2	-	5078	14	FSM	ENSMUSG00000027238.18	ENSMUST00000110592.2	2222	14	-79	-2777	-14	-1	multi-exon	FALSE	canonical	2	7	junction_6	7.44049371651923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATGGGTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	121637552	121376010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138_121422244_121637210
Isoform_103052_116	chr2	-	7385	40	FSM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	12	274	1	-274	multi-exon	FALSE	canonical	0	0	junction_26	28.2050349648808	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTTGAGTTGAAAAG	6991	False	NA	-9	True	AATAAA	-18	NA	121948855	121884274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
Isoform_103053_11	chr2	-	7669	40	FSM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_26	28.2050349648808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTACTGCTGAGGAAATC	6981	False	NA	NA	False	AATAAA	-22	NA	121948865	121884000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
Isoform_103057_13	chr2	-	1829	6	FSM	ENSMUSG00000033396.14	ENSMUST00000135847.2	1813	6	1	-17	1	17	multi-exon	FALSE	canonical	3	87	junction_3	7.08237248385031	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTATGTGTGTGGTG	6991	False	NA	NA	False	NA	NA	NA	121948855	121938129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
Isoform_103060_51	chr2	-	1370	10	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60389	5	60389	-5	3prime_fragment	FALSE	canonical	3	83	junction_9	15.8449275288675	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTCCGTGTTGCCAG	NA	False	NA	-5	True	AATAAA	-15	NA	121956281	121950593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
Isoform_103063_33	chr2	-	1466	11	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60064	6	60064	-6	3prime_fragment	FALSE	canonical	3	37	junction_10	25.8797217913949	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCTTCCGTGTTGCCA	NA	False	NA	-6	True	AATAAA	-14	NA	121956606	121950594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956581
Isoform_103066_3	chr2	-	2560	8	NIC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60384	-6	intron_retention	FALSE	canonical	3	83	junction_7	12.4670995595837	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCTTCCGTGTTGCCA	NA	False	NA	-6	True	AATAAA	-14	NA	121956286	121950594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
Isoform_103067_6	chr2	-	2819	2	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	0	56381	0	-56381	5prime_fragment	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	122016670	122006969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_122009730_122016611
Isoform_103069_36	chr2	-	1779	6	FSM	ENSMUSG00000033256.15	ENSMUST00000110531.9	1557	6	-227	5	-8	-5	multi-exon	FALSE	canonical	3	69	junction_2	30.854497241083	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTTCCGAGCATCC	NA	False	NA	-16	True	TATAAA	-33	NA	122199626	122179378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122199127
Isoform_103071_7	chr2	-	1367	6	NNC	ENSMUSG00000033256.15	novel	1431	6	NA	NA	-1036	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	49.9199358973947	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTTCCGAGCATCC	NA	False	NA	-16	True	TATAAA	-33	NA	122200679	122179378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122200592
Isoform_103072_3	chr2	-	1414	7	NNC	ENSMUSG00000033256.15	novel	1431	6	NA	NA	-1038	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	55.4989989899718	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTTCCGAGCATCC	NA	False	NA	-16	True	TATAAA	-33	NA	122200681	122179378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122200360_122200406_122200592
Isoform_103073_27	chr2	-	1786	6	FSM	ENSMUSG00000033256.15	ENSMUST00000151130.8	1539	6	-11	-236	-11	0	multi-exon	FALSE	canonical	3	35	junction_2	39.8216021777125	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCGAGCATCCACTCGC	NA	False	NA	-10	True	TATAAA	-39	NA	122199629	122179372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_122180021_122184245_122184366_122184511_122184679_122187563_122187771_122189928_122190071_122199127
Isoform_103075_3	chr2	-	1685	5	NIC	ENSMUSG00000033256.15	novel	1557	6	NA	NA	-8	-6	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	56.4773184561732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTTCCGAGCATC	NA	False	NA	-17	True	TATAAA	-32	NA	122199626	122179379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_122180021_122184245_122184442_122187563_122187771_122189928_122190071_122199127
Isoform_103076_8	chr2	-	1929	5	NIC	ENSMUSG00000033256.15	novel	1557	6	NA	NA	-8	0	intron_retention	TRUE	canonical	3	75	junction_4	29.1493996507647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCGAGCATCCACTCGC	NA	False	NA	-10	True	TATAAA	-39	NA	122199626	122179372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_122180021_122184245_122184679_122187563_122187771_122189928_122190071_122199127
Isoform_103078_3	chr2	-	2353	9	FSM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	31	5	31	-5	multi-exon	FALSE	canonical	2	6	junction_3	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGAGTTTGATTTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	122441753	122424952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
Isoform_10308_5	chr10	+	5124	1	FSM	ENSMUSG00000090035.4	ENSMUST00000161240.4	5089	1	-38	3	-38	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTGATGATTTTAGTC	NA	False	NA	13	True	AATAAA	-27	NA	98943982	98949106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98944000_98949100
Isoform_103081_3	chr2	-	5734	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	-286	10	-262	-10	multi-exon	FALSE	canonical	2	11	junction_5	3.62476052848859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCCTAATTGTTTTCTA	NA	False	NA	NA	False	AATAAA	-43	NA	122544845	122523162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
Isoform_103083_4	chr2	-	5549	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	-102	11	-78	-11	multi-exon	FALSE	canonical	2	11	junction_5	3.62476052848859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCCCTAATTGTTTTCT	NA	False	NA	NA	False	AATAAA	-42	NA	122544661	122523163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
Isoform_10309_8	chr10	+	2604	1	FSM	ENSMUSG00000090035.4	ENSMUST00000161240.4	5089	1	13	2472	13	-2472	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGCCTGGGGTTGATA	NA	False	NA	NA	False	AATAAA	-24	NA	98944033	98946637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98944000_98946600
Isoform_103091_79	chr2	-	3004	16	NIC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	215.150634569261	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965542	124929661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_10310_8	chr10	+	2587	1	FSM	ENSMUSG00000090035.4	ENSMUST00000161240.4	5089	1	32	2470	32	-2470	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCTGGGGTTGATATA	NA	False	NA	NA	False	AATAAA	-26	NA	98944052	98946639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98944100_98946600
Isoform_103100_238	chr2	-	2943	15	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	185.119500841583	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965531	124929660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_103116_46	chr2	-	2948	15	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	223.92901572068	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965557	124929660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_103117_61	chr2	-	2888	15	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	223.92901572068	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965497	124929660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_103125_173	chr2	-	2891	14	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	192.845739620923	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965551	124929660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_103126_200	chr2	-	2837	14	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	192.845739620923	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965497	124929660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_10313_3	chr10	-	505	1	Intergenic	novelGene_1154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCAGAAAAAAAAAAGGAGA	NA	False	NA	NA	False	AATACA	-2	NA	99051279	99050774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_99050800_99051300
Isoform_103143_28	chr2	-	5751	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	13	-1	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_1	8.19933417618679	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGTCATGACTTATTT	NA	False	NA	-1	True	AATAAA	-17	NA	125467020	125405008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
Isoform_103144_6	chr2	-	5738	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_22	10.2094660075404	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125467043	125405009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
Isoform_103145_3	chr2	-	5596	27	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	11.3864993243712	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125467031	125405009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
Isoform_103148_13	chr2	-	6733	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	44	20	44	-20	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATTATACCAAGAGAGAA	348	False	NA	NA	False	AATAAA	-16	NA	125624746	125578925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
Isoform_103149_86	chr2	-	6702	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	86	9	86	-9	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGAATTTCTGTGTTC	390	False	NA	NA	False	AATAAA	-27	NA	125624704	125578914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
Isoform_10315_21	chr10	+	180	1	Intergenic	novelGene_1155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCCATTTGATTA	3665	False	NA	NA	False	NA	NA	NA	99310279	99310459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_99310300_99310500
Isoform_103153_3	chr2	-	6741	19	NNC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	85	-10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	24.8758026112838	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGAGAATTTCTGTGTT	389	False	NA	NA	False	AATAAA	-26	NA	125624705	125578915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594000_125594040_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
Isoform_103163_300	chr2	-	1929	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	144	0	1	0	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTGGTTCTTGATGTG	NA	False	NA	NA	False	AATAAA	-19	NA	125700915	125673521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103164_242	chr2	-	3228	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	144	-1299	1	1	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTGTGTGCATGTGAT	NA	False	NA	-3	True	AATAAA	-23	NA	125700915	125672222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103165_42	chr2	-	3162	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	57	-1146	-19	-152	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGTATTTTCTTC	NA	False	NA	74	True	AATAAA	-18	NA	125701002	125672375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103167_249	chr2	-	3075	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	144	-1146	1	-152	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGTATTTTCTTC	NA	False	NA	74	True	AATAAA	-18	NA	125700915	125672375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103168_46	chr2	-	1992	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	77	4	1	-4	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATAGCTTGGTTCTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	125700982	125673525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103169_25	chr2	-	3315	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	58	-1300	-18	2	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125701001	125672221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103173_177	chr2	-	1950	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	144	1298	1	0	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTGGTTCTTGATGTG	NA	False	NA	NA	False	AATAAA	-19	NA	125700915	125673521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103174_26	chr2	-	2039	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	58	1295	-18	0	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTCTTGATGTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	125701001	125673518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103175_120	chr2	-	3249	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	144	-1	1	1	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTGTGTGCATGTGAT	NA	False	NA	-3	True	AATAAA	-23	NA	125700915	125672222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103176_154	chr2	-	3094	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	144	154	1	-154	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATGTGTATTTTCT	NA	False	NA	72	True	AATAAA	-16	NA	125700915	125672377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103179_21	chr2	-	3335	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	58	-1	-18	1	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTGTGTGCATGTGAT	NA	False	NA	-3	True	AATAAA	-23	NA	125701001	125672222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103180_21	chr2	-	3157	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	83	152	7	-152	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGTATTTTCTTC	NA	False	NA	74	True	AATAAA	-18	NA	125700976	125672375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_103187_17	chr2	-	2653	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	-41	1	1	-1	multi-exon	FALSE	canonical	3	55	junction_3	121.804595048791	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCATGCAGACTCATG	NA	False	NA	-11	True	ATTAAA	-13	NA	126517463	126470833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_103188_38	chr2	-	2612	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	2	-1	2	1	multi-exon	FALSE	canonical	3	55	junction_3	121.804595048791	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	-9	True	ATTAAA	-15	NA	126517420	126470831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_10319_7	chr10	-	2615	1	NIC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	-4	-6740	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100323192	100320577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_100320600_100323200
Isoform_103190_10	chr2	-	2755	10	NIC	ENSMUSG00000027361.16	novel	2751	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	154.912480269376	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517463	126470832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517275
Isoform_103191_382	chr2	-	2615	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	68	1470	2	1	multi-exon	FALSE	canonical	3	222	junction_1	62.4468524026632	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	-9	True	ATTAAA	-15	NA	126517420	126470831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_103192_74	chr2	-	2681	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	2	1470	2	1	multi-exon	FALSE	canonical	3	222	junction_1	62.4468524026632	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	-9	True	ATTAAA	-15	NA	126517486	126470831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_10320_4	chr10	-	183	1	Intergenic	novelGene_1156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAATAAACT	NA	False	NA	NA	False	NA	NA	NA	100500779	100500596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_100500600_100500800
Isoform_103200_67	chr2	-	1363	8	FSM	ENSMUSG00000027361.16	ENSMUST00000103226.10	1338	8	-16	-9	0	9	multi-exon	FALSE	canonical	3	353	junction_7	27.2074419591255	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGCAGAATTTGTTTG	NA	False	NA	-8	True	NA	NA	NA	126517422	126480931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_103205_12	chr2	-	1437	8	FSM	ENSMUSG00000027361.16	ENSMUST00000103226.10	1338	8	-94	-5	12	5	multi-exon	FALSE	canonical	3	353	junction_7	27.2074419591255	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGAGTGCAGAATTTG	NA	False	NA	-12	True	NA	NA	NA	126517500	126480935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_103206_3	chr2	-	1050	6	ISM	ENSMUSG00000027364.15	ENSMUST00000028842.9	1361	7	2959	1	2953	0	3prime_fragment	FALSE	canonical	2	5	junction_2	2.41660919471891	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACGTCTCACAGACAGC	NA	False	NA	NA	False	ATTAAA	-13	NA	126622405	126603341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_126603612_126611790_126611924_126617643_126617787_126619818_126620029_126621850_126622047_126622307
Isoform_10321_6	chr10	+	201	1	Intergenic	novelGene_1157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACACTCATATGAACATAC	7456	False	NA	NA	False	NA	NA	NA	101689321	101689522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_101689300_101689500
Isoform_103213_53	chr2	-	7107	39	FSM	ENSMUSG00000027365.15	ENSMUST00000028843.12	6985	39	-118	-4	-5	-2	multi-exon	FALSE	canonical	3	69	junction_11	63.1605262609672	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGTTTAATGAGTTTAC	NA	False	NA	-18	True	ATTAAA	-33	NA	126718155	126633486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647005_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
Isoform_10322_28	chr10	-	175	1	Intergenic	novelGene_1158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATTAGAAAACTA	NA	False	NA	NA	False	NA	NA	NA	102255465	102255290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_102255300_102255500
Isoform_103223_165	chr2	-	7090	39	FSM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	15	2	15	-2	multi-exon	FALSE	canonical	3	201	junction_33	52.8048791605273	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGTTTAATGAGTTTAC	NA	False	NA	-18	True	ATTAAA	-33	NA	126718135	126633486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
Isoform_103232_3	chr2	-	2220	16	NIC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	165	588	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	7.10742960257473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGACAGTTCATGTATA	8444	False	NA	NA	False	AATAAA	-14	NA	126774990	126735595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755219_126755274_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
Isoform_103234_7	chr2	-	2605	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	163	2848	163	1025	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTTTCTGATCTT	8442	False	NA	NA	False	ATTAAA	-19	NA	126774992	126735158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
Isoform_103237_3	chr2	-	2858	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	181	2577	181	1296	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTCCTTCTGCA	8460	False	NA	NA	False	NA	NA	NA	126774974	126734887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
Isoform_103243_1154	chr2	-	2660	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	18	17	18	1	multi-exon	TRUE	canonical	3	394	junction_9	30.9044738701424	1154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126975856	126945745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
Isoform_103248_21	chr2	-	3652	2	FSM	ENSMUSG00000074825.5	ENSMUST00000110386.2	1898	2	-122	-1632	14	-5	multi-exon	FALSE	canonical	3	11	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGTATGAACTGGAATC	NA	False	NA	-16	True	AATAAA	-17	NA	126985348	126980696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126984135_126985134
Isoform_103249_6	chr2	-	323	2	FSM	ENSMUSG00000044145.3	ENSMUST00000150956.2	2364	2	-3	2044	-3	-2044	multi-exon	FALSE	canonical	3	36	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAGATCTTCTCTCGG	NA	False	NA	0	True	ATTAAA	-17	NA	127050177	127046530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127046771_127050094
Isoform_103251_15	chr2	-	3018	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	59	-2	59	2	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTAGTTTTCTGAAG	NA	False	NA	NA	False	NA	NA	NA	127089677	127082855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
Isoform_103252_238	chr2	-	1393	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	59	1623	59	59	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATAAGAGCTTTTGAAA	NA	False	NA	-25	True	AATATA	-17	NA	127089677	127084480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
Isoform_103256_88	chr2	-	1211	8	FSM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	10.321366781822	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	-4	True	AATAAA	-19	NA	127286470	127278134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793_127284045_127286336
Isoform_103258_8	chr2	-	2617	6	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	3	junction_4	40.7499693251418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286477	127278135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_127278327_127278465_127278554_127278656_127280490_127282305_127282419_127283793_127284045_127286336
Isoform_103260_3	chr2	-	2854	5	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	0	-6	intron_retention	FALSE	canonical	3	84	junction_3	9.49670995661129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCAGTTTAGCTTCCAC	NA	False	NA	-11	True	AATAAA	-12	NA	127286477	127278141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_127278554_127278656_127280490_127282305_127282523_127283793_127284045_127286336
Isoform_103261_25	chr2	-	2893	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	30	-1627	30	-5	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGATGGACTCTCTCCA	9658	False	NA	-4	True	AATAAA	-13	NA	127324389	127298422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
Isoform_103263_32	chr2	-	1154	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	35	107	35	3	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGCAGTTTACTTC	9663	False	NA	-8	True	AATATA	-7	NA	127324384	127300156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
Isoform_103267_4	chr2	-	3011	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	-88	-1627	-88	-5	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGATGGACTCTCTCCA	9540	False	NA	-4	True	AATAAA	-13	NA	127324507	127298422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
Isoform_103268_8	chr2	-	2985	6	FSM	ENSMUSG00000034800.16	ENSMUST00000110368.9	2981	6	-6	2	2	-2	multi-exon	FALSE	canonical	1	3	junction_5	12.1983605455815	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGAAGTGTCTCTATT	NA	False	NA	-21	True	NA	NA	NA	127426595	127417454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127423996_127426549
Isoform_103269_5	chr2	-	3087	6	NNC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	12.4963994814506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACTGAAGTGTCTC	NA	False	NA	-25	True	NA	NA	NA	127426595	127417458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127424102_127426549
Isoform_103270_4	chr2	-	2984	6	NNC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	12.8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGAATACTGAAGTGTC	NA	False	NA	-27	True	NA	NA	NA	127426589	127417460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127424007_127426549
Isoform_103271_20	chr2	-	2764	5	FSM	ENSMUSG00000034800.16	ENSMUST00000077422.12	2765	5	2	-1	2	1	multi-exon	FALSE	canonical	3	15	junction_4	7.11951543294907	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACTGAAGTGTCTC	NA	False	NA	-25	True	NA	NA	NA	127426595	127417458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426549
Isoform_103272_4	chr2	-	3671	5	FSM	ENSMUSG00000034800.16	ENSMUST00000077422.12	2765	5	1	-907	1	29	multi-exon	FALSE	canonical	3	15	junction_4	7.11951543294907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTTGACTGTCTCTG	NA	False	NA	-16	True	NA	NA	NA	127426596	127416552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426549
Isoform_103273_9	chr2	-	2740	5	ISM	ENSMUSG00000034800.16	ENSMUST00000110366.8	4912	6	2407	877	-10	1	3prime_fragment	FALSE	canonical	0	0	junction_4	13.4536240470737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACTGAAGTGTCTC	NA	False	NA	-25	True	NA	NA	NA	127426607	127417458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426585
Isoform_103274_217	chr2	-	2340	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	437	1	-39	-1	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGTCTCACTCTTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	127498178	127475146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
Isoform_103277_17	chr2	-	2527	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	250	1	-226	-1	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGTCTCACTCTTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	127498365	127475146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
Isoform_103282_42	chr2	-	1973	4	FSM	ENSMUSG00000027377.3	ENSMUST00000028856.3	2006	4	29	4	29	-4	multi-exon	FALSE	canonical	3	53	junction_2	4.54606056566195	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTGGAGTCTATCGC	NA	False	NA	-2	True	AATAAA	-17	NA	127571823	127546309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127547844_127550756_127550880_127554188_127554357_127571675
Isoform_103284_86	chr2	-	2289	20	FSM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	6	1	6	-1	multi-exon	FALSE	canonical	3	41	junction_11	13.7437973922422	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTGTTATATCTAAAT	2797	False	NA	-1	True	AATAAA	-15	NA	127630811	127582656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
Isoform_103285_28	chr2	-	2285	20	NNC	ENSMUSG00000027378.17	novel	2296	20	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	17.789940822269	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTGTTATATCTAAAT	2798	False	NA	-1	True	AATAAA	-15	NA	127630810	127582656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610176_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
Isoform_103286_43	chr2	-	2273	20	FSM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	-16	3	-16	-1	multi-exon	FALSE	canonical	3	19	junction_11	16.3928570350886	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTTATATCTAAATTT	2818	False	NA	1	True	AATAAA	-17	NA	127630790	127582654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
Isoform_103287_9	chr2	-	2300	20	NNC	ENSMUSG00000027378.17	novel	2260	20	NA	NA	3	3	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_12	19.8002490261068	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATCTAAATTTTTCTTC	2794	False	NA	7	True	AATAAA	-23	NA	127630814	127582648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610176_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
Isoform_103288_323	chr2	-	442	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	0	358	0	-358	multi-exon	FALSE	canonical	3	537	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATCTTTTTCCTCCTC	NA	False	NA	-11	True	AATAAA	-13	NA	127634408	127633665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127633753_127634053
Isoform_103292_11	chr2	-	810	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	-5	-5	-5	5	multi-exon	FALSE	canonical	3	537	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGCCTTGGTTATTTA	NA	False	NA	0	True	GATAAA	-19	NA	127634413	127633302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127633753_127634053
Isoform_10330_159	chr10	+	5177	1	FSM	ENSMUSG00000112523.2	ENSMUST00000220086.2	871	1	2	-4308	2	4308	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGCTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	106018883	106024060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_106018900_106024100
Isoform_103305_441	chr2	-	3427	25	FSM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	-5	-4	-5	4	multi-exon	TRUE	canonical	0	0	junction_18	145.15221297161	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTAGTTGTTCTAAA	NA	False	NA	-4	True	AATAAA	-19	NA	127673790	127643040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
Isoform_103326_478	chr2	-	6332	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	7	2603	7	-2603	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTGATTGCTTTGGA	NA	False	NA	-5	True	AATAAA	-20	NA	128529304	128454626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
Isoform_103328_7	chr2	-	8932	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	6	4	6	-4	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTGGACTTTAGCAAT	NA	False	NA	-26	True	NA	NA	NA	128529305	128452027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
Isoform_103329_45	chr2	-	8339	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	7	596	7	-596	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCAGATCTTAATTCCT	NA	False	NA	NA	False	AATAAA	-21	NA	128529304	128452619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
Isoform_103333_9	chr2	-	6235	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	6	-2600	combination_of_known_junctions	FALSE	canonical	2	6	junction_43	66.9816617117781	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529305	128454623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522313_128522366_128526421_128526584_128527743_128527981_128529072
Isoform_103335_205	chr2	-	1564	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	58	2	58	-2	multi-exon	FALSE	canonical	2	159	junction_3	33.6115214621415	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	-1	True	AATAAA	-20	NA	128785939	128768189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
Isoform_103336_27	chr2	-	1620	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	4	0	4	0	multi-exon	FALSE	canonical	2	159	junction_3	33.6115214621415	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTCATACTTGATT	NA	False	NA	1	True	AATAAA	-22	NA	128785993	128768187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
Isoform_103337_45	chr2	-	1554	9	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_6	71.0922595997623	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTCATACTTGATT	NA	False	NA	1	True	AATAAA	-22	NA	128785939	128768187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777243_128777467_128781762_128781857_128785767
Isoform_103339_4	chr2	-	2372	8	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	87	0	intron_retention	FALSE	canonical	3	222	junction_7	21.296737318382	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTCATACTTGATT	NA	False	NA	1	True	AATAAA	-22	NA	128785910	128768187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_128768732_128770806_128770849_128771766_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
Isoform_103344_508	chr2	-	3110	9	FSM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	27	0	27	0	multi-exon	TRUE	canonical	3	256	junction_2	30.0416377715996	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	0	True	AATAAA	-20	NA	129139105	129110129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
Isoform_103346_156	chr2	-	3113	9	NNC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	21	0	at_least_one_novel_splicesite	TRUE	canonical	3	74	junction_2	84.1037305950218	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	0	True	AATAAA	-20	NA	129139111	129110129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_129111184_129112494_129112679_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
Isoform_103361_3870	chr2	-	1115	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	37	9	-32	-9	multi-exon	TRUE	canonical	3	3295	junction_4	264.518850409989	3870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTGATATATTCATTT	NA	False	NA	-20	True	AATAAA	-19	NA	130021286	130013563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
Isoform_103368_34	chr2	-	1222	12	FSM	ENSMUSG00000027406.14	ENSMUST00000239288.2	1233	12	14	-3	-13	-1	multi-exon	FALSE	canonical	3	48	junction_1	222.733469301557	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTATCTGGTTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	130126367	130121233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130121358_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
Isoform_103374_1054	chr2	-	1499	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	114	3	1	1	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	130126353	130121231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
Isoform_103375_16	chr2	-	2030	11	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	6	1	intron_retention	FALSE	canonical	3	745	junction_5	50.444523984274	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	130126348	130121231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
Isoform_103376_406	chr2	-	2366	14	FSM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_8	18.681383322448	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTTGAGTTCCTATTC	NA	False	NA	-3	True	ATTAAA	-19	NA	130239494	130232694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
Isoform_103383_27	chr2	-	2948	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	3	545	3	-3	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAAAGCTTTTTTGGTT	8060	False	NA	NA	False	ATTAAA	-11	NA	130266195	130260147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
Isoform_103384_31	chr2	-	2235	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	-23	1284	9	3	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACATTCCTGTGTCGG	8034	False	NA	-5	True	AATAAA	-15	NA	130266221	130260886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
Isoform_103385_3	chr2	-	3514	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	-21	3	11	-3	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACAATTGAAGAGTTTA	8036	False	NA	NA	False	AATAAA	-19	NA	130266219	130259605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
Isoform_103386_4	chr2	-	2424	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	-34	1106	-2	170	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTCTTTGGGACTTTG	8023	False	NA	NA	False	AATAAA	-26	NA	130266232	130260708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
Isoform_103388_6	chr2	-	2325	6	FSM	ENSMUSG00000037773.15	ENSMUST00000153663.8	3032	6	-35	742	9	3	multi-exon	FALSE	canonical	3	20	junction_5	6.96850055607374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACATTCCTGTGTCGG	8034	False	NA	-5	True	AATAAA	-15	NA	130266221	130260886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264625_130264732_130264813_130265331
Isoform_103389_5	chr2	-	2033	7	NNC	ENSMUSG00000037773.15	novel	3496	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	11.6045967903528	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACATTCCTGTGTCGG	8054	False	NA	-5	True	AATAAA	-15	NA	130266201	130260886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130261254_130261549_130261629_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
Isoform_103390_102	chr2	-	2369	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	33	1329	22	-1329	multi-exon	FALSE	canonical	3	59	junction_5	36.0477461153953	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATTCCTCCTAGCAC	NA	False	NA	NA	False	AATAAA	-18	NA	130471925	130433250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
Isoform_103392_13	chr2	-	2819	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	32	880	21	-880	multi-exon	TRUE	canonical	3	59	junction_5	36.0477461153953	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATTGATTGCCTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	130471926	130432801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
Isoform_103394_229	chr2	-	2516	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	22	-1329	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATTCCTCCTAGCAC	NA	False	NA	NA	False	AATAAA	-18	NA	130471925	130433250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_103395_27	chr2	-	2964	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	24	-879	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTGATTGCCTATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	130471923	130432800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_103397_12	chr2	-	3858	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	15	6	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATTTCTCATTAGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	130471932	130431915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_103399_14	chr2	-	2578	8	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	23	-1328	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	70.5477114571177	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	AATAAA	-19	NA	130471924	130433249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130433935_130437011_130437074_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_10340_5	chr10	+	176	1	Intergenic	novelGene_1159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAGATGCAAAT	NA	False	NA	NA	False	NA	NA	NA	107514355	107514531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_107514400_107514500
Isoform_103401_10	chr2	-	2504	6	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	22	3159	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_4	32.6398529408452	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130471925	130438545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_103404_178	chr2	-	3135	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	15	-12	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	74	178	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACATTGATCCACAAA	NA	False	NA	-17	True	AATAAA	-13	NA	130471932	130455771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130458663_130470408_130470556_130471835
Isoform_103406_8	chr2	-	4178	6	NNC	ENSMUSG00000037703.15	novel	4201	5	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3.61109401705356	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGGAAAGAGTTTTCA	4021	False	NA	NA	False	NA	NA	NA	130484719	130474758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130475438_130475459_130477385_130477692_130478548_130478862_130479340_130479804_130479968_130484640
Isoform_103407_9	chr2	-	3181	7	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	60	75	60	0	intron_retention	FALSE	canonical	0	0	junction_6	148.454257825994	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130506519	130495954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996
Isoform_103409_12	chr2	-	1181	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	57	0	57	0	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGCCAGAAGTCCCACT	NA	False	NA	71	True	AATAAA	-18	NA	130506522	130495879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
Isoform_103411_348	chr2	-	1086	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	77	75	77	0	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130506502	130495954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
Isoform_103412_4	chr2	-	4144	8	NIC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	44	0	intron_retention	FALSE	canonical	0	0	junction_5	138.556552957076	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130506535	130495954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130503759_130503996_130504110_130505267_130505475_130506394
Isoform_103413_3	chr2	-	1194	4	ISM	ENSMUSG00000074796.11	ENSMUST00000144945.8	2861	10	2898	0	2898	0	3prime_fragment	FALSE	canonical	3	126	junction_3	13.1993265821489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130527587	130526032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150
Isoform_103416_165	chr2	-	3150	21	FSM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	46	0	-4	0	multi-exon	FALSE	canonical	3	76	junction_7	21.856063231973	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539393	130526032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
Isoform_103418_4	chr2	-	3222	21	FSM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	-29	3	-29	-3	multi-exon	FALSE	canonical	3	76	junction_7	21.856063231973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGCAGTCGCCCTCCC	NA	False	NA	-4	True	AATAAA	-19	NA	130539468	130526035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
Isoform_103419_3	chr2	-	3151	21	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-467	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	30.7900552126819	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539906	130526032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539790
Isoform_103420_57	chr2	-	3042	20	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_19	27.8455375458768	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539393	130526032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
Isoform_103422_7	chr2	-	2986	19	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	36.1015371924011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539387	130526032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130534085_130534251_130537960_130538024_130539278
Isoform_103424_20	chr2	-	6619	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	9	0	7	0	multi-exon	FALSE	canonical	3	25	junction_2	14.9720933822533	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTCTCTGCCTGTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	130682045	130548119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
Isoform_103425_31	chr2	-	1313	8	Fusion	ENSMUSG00000089662.2_ENSMUSG00000027309.19	novel	1984	7	NA	NA	0	115	multi-exon	TRUE	canonical	3	31	junction_1	16.7063473211928	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTGTATGTGT	NA	False	NA	1	True	AATAAA	-32	NA	130682052	130645305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_-_130645843_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
Isoform_103427_6	chr2	-	1971	7	FSM	ENSMUSG00000027309.19	ENSMUST00000110243.8	1984	7	13	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	9.03081145609604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATAGATATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	130682052	130647595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
Isoform_103429_6	chr2	-	1134	4	ISM	ENSMUSG00000027316.16	ENSMUST00000110239.8	810	6	1152	-572	-19	3	intron_retention	FALSE	canonical	3	10	junction_1	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTGGTTTTCTGTCAT	NA	False	NA	-2	True	AATAAA	-17	NA	130883450	130881555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_130882179_130882318_130882396_130882935_130883071_130883151
Isoform_10343_49	chr10	-	170	1	Intergenic	novelGene_1160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGATATATCTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	108140948	108140778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_108140800_108140900
Isoform_103430_5	chr2	-	1211	4	FSM	ENSMUSG00000027316.16	ENSMUST00000156509.2	1125	4	-83	-3	-29	3	multi-exon	FALSE	canonical	2	5	junction_1	6.48074069840786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTGGTTTTCTGTCAT	NA	False	NA	-2	True	AATAAA	-17	NA	130883460	130881555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130882246_130882318_130882396_130882935_130883071_130883151
Isoform_103435_20	chr2	-	1269	6	NIC	ENSMUSG00000027327.17	novel	874	7	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	267.333050706418	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGCGGGGGTTTTTT	NA	False	NA	-7	True	AATAAA	-22	NA	131001964	130988236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993677_130995513_130995631_131001872
Isoform_103437_16	chr2	-	1295	6	FSM	ENSMUSG00000027327.17	ENSMUST00000028800.12	832	6	24	-487	-15	7	multi-exon	FALSE	canonical	3	7	junction_4	282.042124513343	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGCGGGGGTTTTTT	NA	False	NA	-7	True	AATAAA	-22	NA	131001977	130988236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995504_130995631_131001872
Isoform_10344_19	chr10	-	270	1	Intergenic	novelGene_1161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGATTCAGCTCT	NA	False	NA	NA	False	NA	NA	NA	108142620	108142350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_108142400_108142600
Isoform_103440_1183	chr2	-	1285	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-36	-8	-14	7	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGCGGGGGTTTTTT	NA	False	NA	-7	True	AATAAA	-22	NA	131001976	130988236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
Isoform_103444_3	chr2	-	1508	7	FSM	ENSMUSG00000027329.10	ENSMUST00000110218.9	2600	7	370	722	-178	573	multi-exon	TRUE	canonical	0	0	junction_5	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTGTGCCTGCCTTCT	8402	False	NA	NA	False	ATTAAA	-17	NA	131016751	131012957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_131013711_131013821_131013946_131014123_131014179_131014289_131014330_131014542_131014700_131015115_131015228_131016484
Isoform_103445_21	chr2	-	5546	6	FSM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	4	428	4	-425	multi-exon	FALSE	canonical	3	12	junction_3	4.63033476111609	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGTATTTGGACCT	NA	False	NA	NA	False	AATAAA	-14	NA	131194797	131140411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
Isoform_103447_86	chr2	-	4657	12	NNC	ENSMUSG00000027339.16	novel	8233	11	NA	NA	109	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.4229858935924	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCTGTGGATCTGCTT	NA	False	NA	0	True	AATAAA	-15	NA	131871812	131834771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_131836034_131836063_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
Isoform_103449_4	chr2	-	3713	12	NNC	ENSMUSG00000027339.16	novel	8233	11	NA	NA	73	-984	at_least_one_novel_splicesite	FALSE	non_canonical	1	8	junction_11	9.31629692687776	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGCGGCGGTGGGGGTG	NA	False	NA	NA	False	AATAAA	-11	NA	131871848	131835755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_131836184_131836209_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
Isoform_103450_171	chr2	-	6358	16	FSM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	5	1	5	-1	multi-exon	FALSE	canonical	3	134	junction_8	16.3644601363918	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGTTGTCATTTGCCT	7604	False	NA	-2	True	AATAAA	-16	NA	131987023	131894416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
Isoform_103451_9	chr2	-	6270	15	NIC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	5	0	intron_retention	FALSE	canonical	3	13	junction_10	41.8786512267459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	7604	False	NA	-1	True	AATAAA	-17	NA	131987023	131894415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
Isoform_103452_11	chr2	-	3075	3	FSM	ENSMUSG00000027341.11	ENSMUST00000110164.8	2957	3	-120	2	-5	0	multi-exon	FALSE	canonical	3	556	junction_2	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4903	False	NA	-4	True	TATAAA	-18	NA	132089694	132081413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132082547_132085938_132086062_132087875
Isoform_103453_505	chr2	-	1578	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	33	1	-5	-1	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGTGTTGTTATTGA	4903	False	NA	-3	True	TATAAA	-19	NA	132089694	132081412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
Isoform_103457_58	chr2	-	1535	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	14	2	1	0	multi-exon	FALSE	canonical	3	93	junction_3	223.123782287371	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4922	False	NA	-4	True	TATAAA	-18	NA	132089675	132081413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
Isoform_103459_9	chr2	-	1517	4	FSM	ENSMUSG00000027341.11	ENSMUST00000180286.2	1531	4	15	-1	-4	-1	multi-exon	FALSE	canonical	3	7	junction_3	263.641591728029	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGTGTTGTTATTGA	4904	False	NA	-3	True	TATAAA	-19	NA	132089693	132081412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089552
Isoform_10346_61	chr10	+	177	1	Intergenic	novelGene_1162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	108229451	108229628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_108229500_108229600
Isoform_103462_7	chr2	-	1433	3	NIC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	306.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGTGTGTTGTTAT	4922	False	NA	-6	True	TATAAA	-16	NA	132089675	132081415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_132082547_132087875_132087995_132089492
Isoform_10347_11	chr10	-	4632	1	Intergenic	novelGene_1163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	108237915	108233283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_108233300_108237900
Isoform_103471_481	chr2	-	1292	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	102	124	102	-124	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCAGTGCCGCCTTTGT	8327	False	NA	-3	True	AATAAA	-21	NA	132095132	132091205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
Isoform_103472_1762	chr2	-	1257	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	137	124	137	-124	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCAGTGCCGCCTTTGT	8362	False	NA	-3	True	AATAAA	-21	NA	132095097	132091205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
Isoform_103475_51	chr2	-	1383	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	134	1	134	-1	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACGTTGTGCAAAGTTTT	8359	False	NA	-11	True	AATAAA	-26	NA	132095100	132091082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
Isoform_103491_39	chr2	-	3657	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	28	1	12	0	multi-exon	FALSE	canonical	3	65	junction_16	14.3132737727671	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132420125	132371002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
Isoform_103495_9	chr2	-	3666	20	FSM	ENSMUSG00000027346.16	ENSMUST00000110142.8	3703	20	37	0	6	0	multi-exon	FALSE	canonical	3	30	junction_19	19.1733598654971	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132420131	132371002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414178_132419987
Isoform_103498_4	chr2	-	3506	19	FSM	ENSMUSG00000027346.16	ENSMUST00000149854.8	3612	19	105	1	3	0	multi-exon	TRUE	canonical	3	23	junction_15	20.2402239776804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132420050	132371002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132406546_132406632_132410539_132410637_132414104_132414175_132419987
Isoform_103499_10	chr2	-	3352	19	ISM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	23	3642	7	2	5prime_fragment	FALSE	canonical	3	65	junction_15	14.6118504248951	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGTCTAGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	132420130	132374643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
Isoform_103502_25	chr2	-	2926	11	FSM	ENSMUSG00000037376.15	ENSMUST00000147336.8	2948	11	19	3	18	-3	multi-exon	FALSE	canonical	3	23	junction_6	111.30929880293	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTCATTAATGATACAAT	NA	False	NA	-15	True	AATAAA	-20	NA	132657956	132646129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
Isoform_103506_588	chr2	-	2809	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	18	1	18	-1	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCATTAATGATACAATGC	NA	False	NA	-13	True	AATAAA	-22	NA	132657956	132646127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
Isoform_10351_4	chr10	-	254	1	Intergenic	novelGene_1165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAATTTTGCCCAGTTT	740	False	NA	NA	False	AATAAA	-24	NA	108295831	108295577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_108295600_108295800
Isoform_103515_9	chr2	-	3711	4	ISM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	879	3	879	-3	3prime_fragment	FALSE	canonical	3	9	junction_1	2.86744175568088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGGATGTATTTTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	132721932	132710227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154
Isoform_10352_66	chr10	-	174	1	Intergenic	novelGene_1166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATTAACAAAGCT	NA	False	NA	NA	False	NA	NA	NA	108317540	108317366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_108317400_108317500
Isoform_103520_7	chr2	-	3788	5	FSM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	-73	0	-73	0	multi-exon	FALSE	canonical	3	9	junction_1	2.48746859276655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGATGTATTTTGTAACAA	NA	False	NA	NA	False	AATAAA	-21	NA	132722884	132710224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154_132721836_132722713
Isoform_103521_15	chr2	-	3675	5	FSM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	40	0	40	0	multi-exon	FALSE	canonical	3	9	junction_1	2.48746859276655	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGATGTATTTTGTAACAA	NA	False	NA	NA	False	AATAAA	-21	NA	132722771	132710224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154_132721836_132722713
Isoform_103523_10	chr2	-	5135	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	56	297	1	-297	multi-exon	FALSE	canonical	3	29	junction_5	5.36808406515884	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGAGTGTTCATTCTC	2748	False	NA	NA	False	AAAAAG	-19	NA	134486009	134436401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
Isoform_103525_176	chr2	-	2953	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	223	2	-12	-2	multi-exon	FALSE	canonical	3	83	junction_3	119.159389055164	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTATACAATCCTTAC	NA	False	NA	-2	True	AATAAA	-18	NA	136733086	136715701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
Isoform_103528_7	chr2	-	2951	6	FSM	ENSMUSG00000027274.17	ENSMUST00000028730.13	2935	6	-19	3	-12	-3	multi-exon	FALSE	canonical	3	17	junction_5	104.732802884292	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGTATACAATCCTTA	NA	False	NA	-3	True	AATAAA	-17	NA	136733321	136715702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136733198
Isoform_103535_48	chr2	-	5412	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	198	2	198	-2	multi-exon	FALSE	canonical	3	87	junction_14	16.9906327133512	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGTGTGGAGTCTTG	NA	False	NA	-3	True	AATAAA	-42	NA	136958366	136923377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
Isoform_103536_83	chr2	-	5313	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	302	-3	302	3	multi-exon	TRUE	canonical	3	87	junction_14	16.9906327133512	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGGAGTCTTGTGAGC	NA	False	NA	2	True	ATTAAA	-23	NA	136958262	136923372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
Isoform_103538_29	chr2	-	5734	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	-122	0	-122	0	multi-exon	FALSE	canonical	3	87	junction_14	16.9906327133512	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGTGGAGTCTTGTG	NA	False	NA	-1	True	AATAAA	-44	NA	136958686	136923375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
Isoform_10354_5	chr10	-	4375	1	Intergenic	novelGene_740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGGAAAACTCACTCCT	NA	False	NA	NA	False	NA	NA	NA	13855932	13851557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_13851600_13855900
Isoform_103540_9	chr2	-	2482	14	FSM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	-2	0	-2	0	multi-exon	FALSE	canonical	3	23	junction_13	23.0823070642491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	139908682	139675399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908406
Isoform_103541_57	chr2	-	2232	14	FSM	ENSMUSG00000039033.12	ENSMUST00000110079.9	2258	14	26	0	6	0	multi-exon	FALSE	canonical	3	37	junction_3	20.460092487948	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	139908699	139675399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
Isoform_103542_7	chr2	-	2218	14	NNC	ENSMUSG00000039033.12	novel	2258	14	NA	NA	12	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	25.4783816007627	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGACTGCTTGTCTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	139908693	139675394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789089_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
Isoform_103543_3	chr2	-	2144	13	NNC	ENSMUSG00000039033.12	novel	2258	14	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	29.4197354395537	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGGTGTGTGACTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	139908707	139675402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789089_139789156_139793379_139793500_139819526_139819634_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
Isoform_103544_8	chr2	-	2158	8	ISM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	2	142742	2	310	5prime_fragment	FALSE	canonical	3	57	junction_2	18.1186565254081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGGTATTTTCTCAG	NA	False	NA	NA	False	AATAAA	-12	NA	139908703	139818141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
Isoform_103545_12	chr2	-	1853	8	ISM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	5	143044	5	8	5prime_fragment	FALSE	canonical	3	57	junction_2	18.1186565254081	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTTTGCCCATTCTTT	NA	False	NA	NA	False	NA	NA	NA	139908700	139818443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
Isoform_103546_4	chr2	-	2075	7	NIC	ENSMUSG00000039033.12	novel	2127	13	NA	NA	5	310	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	30.799080072842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGGTATTTTCTCAG	NA	False	NA	NA	False	AATAAA	-12	NA	139908700	139818141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_139819634_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
Isoform_10355_9	chr10	-	656	1	NIC	ENSMUSG00000035798.15	novel	4548	17	NA	NA	-6	-35229	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	110845870	110845214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_110845200_110845900
Isoform_103559_674	chr2	-	3380	14	FSM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	13	3	13	-3	multi-exon	TRUE	canonical	3	379	junction_8	12.585330053057	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCCGTTTGTATAGC	6990	False	NA	-15	True	AATAAA	-13	NA	140012471	139961805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
Isoform_103564_10	chr2	-	3482	14	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	18	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	107.34669817683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAATTACCCGTTTGTA	6995	False	NA	-19	True	AATAAA	-9	NA	140012466	139961809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012285
Isoform_10357_90	chr10	-	228	1	Intergenic	novelGene_1167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-13	NA	111072030	111071802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_111071800_111072000
Isoform_103573_3	chr2	-	3440	3	FSM	ENSMUSG00000051379.13	ENSMUST00000056760.4	3334	3	-48	-58	2	58	multi-exon	FALSE	canonical	3	10	junction_1	29	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAATAATGTTCCAATG	NA	False	NA	NA	False	AATAAA	-15	NA	140513368	140501186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_140503672_140504627_140505380_140513165
Isoform_103574_4	chr2	-	3402	3	FSM	ENSMUSG00000051379.13	ENSMUST00000056760.4	3334	3	-69	1	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	29	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAGAAAAAAAAAAAAG	NA	False	NA	NA	False	AATACA	-4	NA	140513389	140501245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_140503672_140504627_140505380_140513165
Isoform_103575_3	chr2	-	4508	3	FSM	ENSMUSG00000051379.13	ENSMUST00000056760.4	3334	3	-50	-1124	0	-3	multi-exon	FALSE	canonical	3	10	junction_1	29	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGTGTATCCTTTTT	NA	False	NA	-2	True	AATAAA	-33	NA	140513370	140500120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_140503672_140504627_140505380_140513165
Isoform_103579_64	chr2	-	3974	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	2	1	2	-1	multi-exon	FALSE	canonical	3	47	junction_1	10.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTGTATCCTTTTTAC	NA	False	NA	0	True	AATAAA	-35	NA	140513387	140500118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_140503672_140505180_140505380_140513165
Isoform_10358_9	chr10	-	174	1	Intergenic	novelGene_1168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGCAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	111092961	111092787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_111092800_111093000
Isoform_103583_63	chr2	-	5129	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	64	1190	-23	47	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGTAGTTCAGTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	142743387	142460583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
Isoform_103584_11	chr2	-	5231	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	-38	1190	-38	47	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGTAGTTCAGTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	142743489	142460583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
Isoform_103585_47	chr2	-	5467	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	53	863	-34	374	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTATGCTTCTCTCTC	NA	False	NA	NA	False	AATAAA	-26	NA	142743398	142460256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
Isoform_103586_5	chr2	-	5554	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	-39	868	-39	369	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAAGTGTATGCTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	142743490	142460261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
Isoform_103589_9	chr2	-	6310	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	64	9	-23	-9	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCACAGTACAGTTACC	NA	False	NA	NA	False	AATAAA	-20	NA	142743387	142459402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
Isoform_103592_3	chr2	-	5054	25	NIC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	-30	49	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.7234534296783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTAGTTCAGTTTAAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	142743394	142460581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_142461837_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
Isoform_10360_12	chr10	+	176	1	Intergenic	novelGene_1169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATGAATGCTTG	NA	False	NA	NA	False	NA	NA	NA	111114851	111115027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_111114900_111115000
Isoform_10361_17	chr10	-	152	1	Intergenic	novelGene_1170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	111246579	111246427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_111246400_111246600
Isoform_103623_12	chr2	-	3382	23	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	22527	0	-5571	0	3prime_fragment	FALSE	canonical	3	237	junction_15	46.7493757416225	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143830656	143789314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067
Isoform_103624_12	chr2	-	3327	23	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	22582	0	-5516	0	3prime_fragment	FALSE	canonical	3	237	junction_15	46.7493757416225	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143830601	143789314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067
Isoform_103625_12	chr2	-	3469	23	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	22440	0	-5658	0	3prime_fragment	FALSE	canonical	3	237	junction_15	46.7493757416225	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143830743	143789314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067
Isoform_103627_10	chr2	-	3789	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-6008	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	87.0715977687111	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143831093	143789314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830678_143830707
Isoform_103638_211	chr2	-	5089	26	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	96.6923699161418	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	9791	False	NA	-2	True	ATTAAA	-19	NA	143853150	143789315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830534_143830557_143830678_143830707_143832187_143852918
Isoform_103639_140	chr2	-	5134	26	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	96.6923699161418	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9747	False	NA	-1	True	ATTAAA	-20	NA	143853194	143789314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830534_143830557_143830678_143830707_143832187_143852918
Isoform_103641_7	chr2	-	4766	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	33	-348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	88.5776397511747	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTAAGAGAACCTTTGT	9791	False	NA	-7	True	AATAAA	-16	NA	143853150	143789662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830678_143830707_143832187_143852918
Isoform_103642_21	chr2	-	3088	23	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_22	85.5170105353847	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9728	False	NA	-1	True	ATTAAA	-20	NA	143853213	143789314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143852918
Isoform_103672_70	chr2	-	1989	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	23	407	23	-407	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTGCTTTTGTAGAA	NA	False	NA	-18	True	AATAAA	-18	NA	144112469	144092449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
Isoform_103673_43	chr2	-	2233	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	-221	407	-9	-407	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTGCTTTTGTAGAA	NA	False	NA	-18	True	AATAAA	-18	NA	144112713	144092449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
Isoform_103679_38	chr2	-	2372	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	45	2	45	-2	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGGTTTCTGACTGTT	NA	False	NA	NA	False	AAGAAA	-14	NA	144112447	144092044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
Isoform_103687_1033	chr2	-	1990	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	113	409	-9	-409	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGGAGTGCTTTTGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	144112713	144092451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_103688_440	chr2	-	2397	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	113	2	-9	-2	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGGTTTCTGACTGTT	NA	False	NA	NA	False	AAGAAA	-14	NA	144112713	144092044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_103689_178	chr2	-	2109	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	-7	410	-7	-410	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGGAGTGCTTTTGTA	NA	False	NA	-21	True	AATAAA	-15	NA	144112833	144092452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_103690_92	chr2	-	2486	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	24	2	24	-2	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGGTTTCTGACTGTT	NA	False	NA	NA	False	AAGAAA	-14	NA	144112802	144092044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_103708_18	chr2	-	1536	4	FSM	ENSMUSG00000037279.14	ENSMUST00000037423.4	1539	4	1	2	1	-2	multi-exon	FALSE	canonical	3	14	junction_1	4.64279609239471	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTCTTTTTTAAAATT	NA	False	NA	-14	True	AATAAA	-17	NA	144174065	144147096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_144147840_144159630_144159821_144172823_144173042_144173680
Isoform_103711_443	chr2	-	2115	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	55	0	-24	0	multi-exon	FALSE	canonical	3	248	junction_1	20.0873094266007	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	False	NA	-9	True	AATAAA	-20	NA	144392734	144384184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
Isoform_103717_429	chr2	-	2328	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	319	781	19	-781	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTTACTTGAGTCCG	NA	False	NA	-15	True	AGTAAA	-15	NA	145776615	145760179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
Isoform_103718_14	chr2	-	3398	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	297	-267	-3	267	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAATTGGGTCTTGAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	145776637	145759131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
Isoform_103725_4	chr2	-	8808	41	FSM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	-67	2289	-45	977	multi-exon	FALSE	canonical	3	23	junction_26	5.33291665038935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATTAAAAAAATAAAAA	NA	False	NA	-37	True	NA	NA	NA	146353991	146084087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
Isoform_103727_5	chr2	-	6242	40	NIC	ENSMUSG00000037110.21	novel	3095	19	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	6.39896441325705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGGAGCATTTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	146353957	146100488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_146100865_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
Isoform_103728_5	chr2	-	1451	2	FSM	ENSMUSG00000054160.3	ENSMUST00000067020.3	1725	2	264	10	264	-10	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACACTAAGTATACGGAT	NA	False	NA	NA	False	AATAAA	-8	NA	146927101	146925245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_146926410_146926814
Isoform_103729_5	chr2	-	4091	8	ISM	ENSMUSG00000027438.15	ENSMUST00000028926.13	4412	11	25181	3	25105	-3	3prime_fragment	FALSE	canonical	1	1	junction_7	5.19418827505653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTTGACTGTTTTTT	NA	False	NA	-3	True	AATAAA	-15	NA	148549206	148535907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148549078
Isoform_103730_17	chr2	-	4327	10	FSM	ENSMUSG00000027438.15	ENSMUST00000136513.2	4311	10	-21	5	-21	-5	multi-exon	FALSE	canonical	3	13	junction_4	1.6629588385662	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACCTTTTGACTGTTTT	NA	False	NA	-5	True	AATAAA	-13	NA	148574354	148535909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148551236_148551354_148554594_148554675_148574185
Isoform_103732_1024	chr2	-	778	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	80	2	-45	-2	multi-exon	FALSE	canonical	3	2071	junction_1	68	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTTTGAGTTGTTTCT	NA	False	NA	-8	True	ATTAAA	-18	NA	148717416	148713643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_148713964_148714736_148714851_148717072
Isoform_103733_1037	chr2	-	752	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	108	0	-17	0	multi-exon	FALSE	canonical	3	2071	junction_1	68	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	False	NA	-6	True	ATTAAA	-20	NA	148717388	148713641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_148713964_148714736_148714851_148717072
Isoform_103741_4	chr2	-	4186	4	FSM	ENSMUSG00000068134.14	ENSMUST00000122859.8	4181	4	-6	1	-6	-1	multi-exon	FALSE	canonical	2	3	junction_1	24.3903441732356	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCCTGAGACTCTTC	NA	False	NA	0	True	NA	NA	NA	149978604	149956326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_149960121_149961400_149961549_149961744_149961872_149978487
Isoform_103743_30	chr2	-	4091	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	35	1	5	-1	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCCTGAGACTCTTC	NA	False	NA	0	True	NA	NA	NA	149978593	149956326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
Isoform_103746_20	chr2	-	2330	4	FSM	ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	1	403	1	-403	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAATTGTTAGGGGC	NA	False	NA	NA	False	AATAAA	-11	NA	150327010	150313313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
Isoform_103749_7	chr2	-	2314	10	NIC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	33.5227948980657	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	1010	False	NA	NA	False	AATAAA	-15	NA	150450476	150424999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150441647_150441738_150442163_150442281_150450307
Isoform_103750_159	chr2	-	2210	9	FSM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	25	0	2	0	multi-exon	FALSE	canonical	3	74	junction_7	10.0054672554559	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	1024	False	NA	NA	False	AATAAA	-15	NA	150450462	150424999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
Isoform_103751_4	chr2	-	2030	8	NIC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	30.7604304526555	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	1011	False	NA	NA	False	AATAAA	-15	NA	150450475	150424999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_150426109_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
Isoform_103754_59	chr2	-	2903	10	ISM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	30121	6	-22	-6	3prime_fragment	FALSE	canonical	3	171	junction_6	13.5655700712511	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	5032	False	NA	-11	True	AATAAA	-21	NA	150480057	150460030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766
Isoform_103756_39	chr2	-	2821	11	NIC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	-13	-6	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	53.8924855615326	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	5041	False	NA	-11	True	AATAAA	-21	NA	150480048	150460030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150479992
Isoform_103758_15	chr2	-	3373	13	ISM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	8197	0	8153	0	3prime_fragment	FALSE	canonical	3	168	junction_11	14.0185888495716	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTTTTTGGTTGAC	NA	False	NA	-5	True	AATAAA	-27	NA	150501981	150460024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755
Isoform_103759_135	chr2	-	3616	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	-4	6	-4	-6	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150510182	150460030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
Isoform_103760_407	chr2	-	3567	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	45	6	1	-6	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150510133	150460030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
Isoform_103762_39	chr2	-	3352	14	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	7988	-6	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	46.5577201092917	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150502146	150460030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150502032
Isoform_103767_320	chr2	-	1947	13	FSM	ENSMUSG00000032046.16	ENSMUST00000056149.15	1999	13	49	3	-30	-3	multi-exon	FALSE	canonical	2	181	junction_4	35.7897991363771	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGGAATCAGAGTTTC	NA	False	NA	-8	True	AATAAA	-35	NA	150746612	150674415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
Isoform_103773_130	chr2	-	5043	24	FSM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	49	1	-17	-1	multi-exon	FALSE	canonical	3	41	junction_10	8.5081968705865	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTTTAAAGTTTTAAAT	7612	False	NA	1	True	ATTAAA	-17	NA	150851269	150776439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150792300_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
Isoform_103777_18	chr2	-	2314	13	ISM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	13	23563	-9	477	5prime_fragment	FALSE	canonical	3	46	junction_10	8.16836716989523	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTATTAGTCAGCTCT	7576	False	NA	NA	False	ATTAAA	-13	NA	150851305	150800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
Isoform_103778_5	chr2	-	2608	13	ISM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	-1	23283	-1	757	5prime_fragment	FALSE	canonical	3	46	junction_10	8.16836716989523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAATCTTTTTAA	7562	False	NA	NA	False	NA	NA	NA	150851319	150799721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
Isoform_103781_85	chr2	-	1347	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	36	11	0	-11	multi-exon	FALSE	canonical	3	184	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCATCCTTTTAG	NA	False	NA	-12	True	ATTAAA	-27	NA	150881282	150871615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_150872837_150881156
Isoform_103783_3	chr2	-	1573	2	NNC	ENSMUSG00000053916.5	novel	1394	2	NA	NA	4	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTCATCCTTTTA	NA	False	NA	-13	True	ATTAAA	-26	NA	150881278	150871616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_150872837_150880925
Isoform_103784_6	chr2	-	3374	5	FSM	ENSMUSG00000027457.16	ENSMUST00000109877.10	3367	5	32	-39	0	39	multi-exon	TRUE	canonical	1	1	junction_2	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCCAACTTTGCAGCC	1671	False	NA	NA	False	CATAAA	-26	NA	151474481	151433605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_151436520_151439028_151439179_151442897_151442995_151474067_151474175_151474375
Isoform_103788_47	chr2	-	2845	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	35	929	18	-679	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAATAGCTTTATTAA	NA	False	NA	0	True	AATAAA	-20	NA	151583195	151558660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
Isoform_103790_138	chr2	-	1345	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	15	2449	-2	4	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACGCTCCTTTTTGTTA	NA	False	NA	-24	True	AATACA	-19	NA	151583215	151560180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
Isoform_103791_255	chr2	-	1315	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	45	2449	28	4	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACGCTCCTTTTTGTTA	NA	False	NA	-24	True	AATACA	-19	NA	151583185	151560180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
Isoform_103794_7	chr2	-	3255	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	36	518	19	-268	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTGGGTTTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	151583194	151558249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
Isoform_103795_145	chr2	-	1694	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	59	1	59	-1	multi-exon	FALSE	canonical	3	86	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTTGGACTCTTCTCTG	NA	False	NA	-2	True	AATAAA	-21	NA	151822080	151811318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_151812845_151821912
Isoform_10380_12	chr10	+	195	1	Intergenic	novelGene_1171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATAGCTCTGTGTTGAT	4289	False	NA	NA	False	NA	NA	NA	111489641	111489836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_111489600_111489800
Isoform_103805_407	chr2	-	2383	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	0	1	0	-1	multi-exon	FALSE	canonical	3	444	junction_6	68.3604931579153	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAAGGTGTCATGCTTG	NA	False	NA	-13	True	ATTAAA	-15	NA	152174332	152158254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
Isoform_103807_418	chr2	-	2352	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	31	1	3	-1	multi-exon	FALSE	canonical	3	444	junction_6	68.3604931579153	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAAGGTGTCATGCTTG	NA	False	NA	-13	True	ATTAAA	-15	NA	152174301	152158254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
Isoform_10381_11	chr10	-	178	1	Intergenic	novelGene_1172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAGAAGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	111775606	111775428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_111775400_111775600
Isoform_103817_54	chr2	-	2249	13	FSM	ENSMUSG00000027466.16	ENSMUST00000028964.14	2252	13	1	2	1	-2	multi-exon	FALSE	canonical	3	72	junction_12	150.053231295505	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174572	152158255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
Isoform_103825_22	chr2	-	3283	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	4	-3	intron_retention	FALSE	canonical	3	483	junction_1	60.3850974993003	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAAAGGTGTCATGCT	NA	False	NA	-15	True	ATTAAA	-13	NA	152174300	152158256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
Isoform_103829_96	chr2	-	2191	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	166.375148384607	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAAGGTGTCATGCTTG	NA	False	NA	-13	True	ATTAAA	-15	NA	152174301	152158254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
Isoform_103833_15	chr2	-	4184	10	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	3	-3	intron_retention	FALSE	canonical	3	483	junction_1	61.0563390911204	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAAAGGTGTCATGCT	NA	False	NA	-15	True	ATTAAA	-13	NA	152174301	152158256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
Isoform_103836_16	chr2	-	2077	10	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	188.779118430921	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAAAGGTGTCATGCT	NA	False	NA	-15	True	ATTAAA	-13	NA	152174301	152158256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
Isoform_10385_4	chr10	-	182	1	Intergenic	novelGene_1173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGATAATGTGTCTAAAC	NA	False	NA	NA	False	NA	NA	NA	112613663	112613481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_112613500_112613700
Isoform_103855_2779	chr2	-	2052	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	-28	2	-28	-2	multi-exon	FALSE	canonical	3	926	junction_3	7.71722460186015	2779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTTGGTGACTTTCT	NA	False	NA	-6	True	AATAAA	-27	NA	152185980	152179343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
Isoform_10386_366	chr10	-	3567	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	-9	8	-3	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATATTTTGACTCA	NA	False	NA	NA	False	AATAAA	-36	NA	112764909	112761342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_112761300_112764900
Isoform_103861_45	chr2	-	1963	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-5972	-2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	427.130737206615	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTTGGTGACTTTCT	NA	False	NA	-6	True	AATAAA	-27	NA	152191924	152179343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_152180608_152181634_152181928_152184956_152185248_152191809
Isoform_103871_79	chr2	-	2592	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	-21	-3	-21	-1	multi-exon	FALSE	canonical	3	144	junction_2	91.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCCTTGGCTCTGCG	NA	False	NA	-6	True	AATAAA	-21	NA	152672607	152622588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152624203_152671346_152672023_152672305
Isoform_103872_231	chr2	-	2550	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	25	-7	0	3	multi-exon	FALSE	canonical	3	144	junction_2	91.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTGGCTCTGCGCCGC	NA	False	NA	-2	True	AATAAA	-25	NA	152672561	152622584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152624203_152671346_152672023_152672305
Isoform_103879_31	chr2	-	2422	3	NIC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	154.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCCTTGGCTCTGCG	NA	False	NA	-6	True	AATAAA	-21	NA	152672592	152622588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152624203_152671346_152672023_152672460
Isoform_103880_491	chr2	-	2391	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	25	1	7	-1	multi-exon	FALSE	canonical	3	148	junction_2	89.5	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCCTTGGCTCTGCG	NA	False	NA	-6	True	AATAAA	-21	NA	152673623	152622588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152624203_152671346_152672023_152673522
Isoform_103881_15	chr2	-	2512	3	NNC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	160.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCTCTGCGCCGCAT	NA	False	NA	0	True	AATAAA	-27	NA	152673623	152622582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_152624203_152671346_152672023_152673407
Isoform_103883_25	chr2	-	2554	3	NIC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	150.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCCTTGGCTCTGCG	NA	False	NA	-6	True	AATAAA	-21	NA	152672551	152622588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152624203_152671346_152672041_152672305
Isoform_103886_68	chr2	-	2405	3	NIC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	148	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCCTTGGCTCTGCG	NA	False	NA	-6	True	AATAAA	-21	NA	152673619	152622588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152624203_152671346_152672041_152673522
Isoform_103891_224	chr2	-	1226	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	40	7	-10	-7	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACAGCTCTGAGTTGTC	8679	False	NA	NA	False	AATAAA	-14	NA	152857307	152850816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
Isoform_103893_3	chr2	-	1261	5	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	97.0875893201598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACAGCTCTGAGTTGTC	8689	False	NA	NA	False	AATAAA	-14	NA	152857297	152850816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856051_152857153
Isoform_103894_3	chr2	-	1406	5	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	103.576964137785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGCTCTGAGTTGTCAC	8698	False	NA	NA	False	AATAAA	-16	NA	152857288	152850814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856203_152857153
Isoform_103895_8	chr2	-	2786	4	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	235	junction_2	15.7480157480236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGAGTTGTCACCCAC	8679	False	NA	NA	False	AATAAA	-20	NA	152857307	152850810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_152851657_152852177_152852259_152854300_152856006_152857153
Isoform_103896_25	chr2	-	5423	3	FSM	ENSMUSG00000051413.18	ENSMUST00000056924.14	5485	3	54	8	54	5	multi-exon	FALSE	canonical	3	22	junction_1	0.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGCAGTTTTGAACTT	7358	False	NA	-7	True	ATTAAA	-16	NA	153083292	153069686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_153074640_153077719_153078093_153083195
Isoform_103897_4	chr2	-	1665	3	NNC	ENSMUSG00000073236.5	novel	427	2	NA	NA	-34	-335	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	11	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACTTGCTAAAA	8978	False	NA	NA	False	NA	NA	NA	153188027	153183411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_153184785_153187037_153187099_153187796
Isoform_103898_7	chr2	-	4453	8	FSM	ENSMUSG00000061411.13	ENSMUST00000109784.2	5610	8	5	1152	5	-1152	multi-exon	FALSE	canonical	3	28	junction_7	27.1496232168391	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCCGTCCGTGGTCTGA	NA	False	NA	-3	True	AGTAAA	-23	NA	153286394	153250537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153286276
Isoform_103903_7	chr2	-	4556	8	FSM	ENSMUSG00000061411.13	ENSMUST00000109784.2	5610	8	-107	1161	-107	-1161	multi-exon	FALSE	canonical	3	28	junction_7	27.1496232168391	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTTTCAATCCGTCC	NA	False	NA	-12	True	AGTAAA	-14	NA	153286506	153250546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153286276
Isoform_103905_3	chr2	-	6472	11	FSM	ENSMUSG00000061411.13	ENSMUST00000035346.14	6399	11	-72	-1	-72	1	multi-exon	FALSE	canonical	3	34	junction_10	23.8863978029338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTTCGACTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	153371963	153249380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
Isoform_103906_3	chr2	-	5544	11	FSM	ENSMUSG00000061411.13	ENSMUST00000035346.14	6399	11	-307	1162	-307	-1158	multi-exon	FALSE	canonical	3	34	junction_10	23.8863978029338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTCAATCCGTCCGTG	NA	False	NA	-9	True	AGTAAA	-17	NA	153372198	153250543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
Isoform_103909_12	chr2	-	5983	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8887	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	25.0856532703456	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTACACTGAGCTTCGA	NA	False	NA	NA	False	AATAAA	-13	NA	153363004	153249387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
Isoform_103911_7	chr2	-	5710	8	NIC	ENSMUSG00000061411.13	novel	5610	8	NA	NA	-113	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	31.3205937337838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTTCGACTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	153286512	153249380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153286276
Isoform_103913_7	chr2	-	4424	8	NIC	ENSMUSG00000061411.13	novel	5610	8	NA	NA	5	-1163	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	31.3205937337838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACCAGTTTCAATCCGT	NA	False	NA	-14	True	AGTAAA	-12	NA	153286394	153250548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153286276
Isoform_103915_4	chr2	-	6428	11	NIC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-46	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	26.7546257682667	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTTCGACTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	153371937	153249380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
Isoform_103918_7	chr2	-	5970	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8887	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	27.7676070268938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGAGCTTCGACTATG	NA	False	NA	NA	False	AATAAA	-18	NA	153363004	153249382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
Isoform_103919_3	chr2	-	747	5	NNC	ENSMUSG00000061411.13	novel	587	4	NA	NA	8887	24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.6043977004683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153363004	153295794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_153296044_153312607_153312718_153319790_153319903_153325606_153325763_153362884
Isoform_103920_12	chr2	-	1323	10	FSM	ENSMUSG00000056941.18	ENSMUST00000109782.2	1343	10	20	0	11	0	multi-exon	FALSE	canonical	3	10	junction_9	72.7254264636584	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGCTCTGAATCCA	NA	False	NA	-19	True	ATTAAA	-17	NA	153474640	153460753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474107_153474183_153474513
Isoform_103921_86	chr2	-	1279	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	31	1900	-10	1	multi-exon	FALSE	canonical	3	166	junction_3	11.9373363863133	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGCTCTGAATCCAC	NA	False	NA	-18	True	ATTAAA	-18	NA	153474670	153460752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
Isoform_103926_15	chr2	-	2039	14	NIC	ENSMUSG00000027487.12	novel	1970	14	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	25.3818180276853	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAATGGCTTCCTTGTCT	5706	False	NA	-19	True	AATAAA	-8	NA	154214613	154177309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214501
Isoform_103927_188	chr2	-	1982	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	-6	-6	-6	0	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTACTTTTTTCA	5674	False	NA	-9	True	AATAAA	-18	NA	154214645	154177299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
Isoform_103928_3	chr2	-	2272	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	-305	3	-14	-3	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGGCTTCCTTGTCTA	5375	False	NA	-18	True	AATAAA	-9	NA	154214944	154177308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
Isoform_103930_6	chr2	-	2219	15	FSM	ENSMUSG00000027487.12	ENSMUST00000109731.8	2160	15	-65	6	-65	0	multi-exon	FALSE	canonical	2	7	junction_14	23.0212856251934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTCCTTGTCTACTT	5324	False	NA	-15	True	AATAAA	-12	NA	154214995	154177305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600_154214775_154214881
Isoform_103932_521	chr2	-	2082	8	FSM	ENSMUSG00000027488.13	ENSMUST00000109728.8	2131	8	41	8	23	-8	multi-exon	FALSE	canonical	3	100	junction_7	15.9808558939138	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCATCATGTCTGTGG	NA	False	NA	-7	True	AATAAA	-22	NA	154249978	154218240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
Isoform_103935_13	chr2	-	1993	9	NNC	ENSMUSG00000027488.13	novel	2131	8	NA	NA	-13215	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	53.6328665558722	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCCTGGCATCATGT	NA	False	NA	-13	True	AATAAA	-16	NA	154263234	154218246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154254470_154254644_154263111
Isoform_103936_34	chr2	-	1830	13	FSM	ENSMUSG00000027489.16	ENSMUST00000000895.13	1829	13	9	-10	-5	10	multi-exon	TRUE	canonical	3	34	junction_6	10.0840220150494	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCTCTTGTCTGTCTG	7320	False	NA	-5	True	AATAAA	-34	NA	154400777	154386308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
Isoform_103937_8	chr2	-	1887	13	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	11.513277359447	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTCTCTCTCTCTCCC	7281	False	NA	-23	True	AATAAA	-16	NA	154400816	154386326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388837_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
Isoform_103944_49	chr2	-	2426	8	NNC	ENSMUSG00000027490.18	novel	2755	7	NA	NA	38	-433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	488.3588927861	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAATGGAGCGTTTATT	9540	False	NA	-7	True	NA	NA	NA	154411774	154401986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_154402321_154402350_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
Isoform_103945_68	chr2	-	2890	7	FSM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	-134	-1	38	1	multi-exon	FALSE	canonical	0	0	junction_3	459.079392794851	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGGTTTGAAACTCTC	9540	False	NA	-20	True	AATAAA	-17	NA	154411774	154401552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
Isoform_103947_187	chr2	-	2695	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	39	-2	39	2	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTTGTGTCGAATGC	9541	False	NA	-1	True	AGTAAA	-16	NA	154411773	154401324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
Isoform_103948_782	chr2	-	2008	8	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	-428	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	453.49652924892	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGCGTTTATTTATTT	9541	False	NA	-2	True	NA	NA	NA	154411773	154401981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_154402321_154402350_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
Isoform_103949_746	chr2	-	2466	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	39	227	39	0	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9541	False	NA	-21	True	AATAAA	-16	NA	154411773	154401553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
Isoform_103951_34	chr2	-	2052	8	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	-4	-427	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	453.49652924892	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGCGTTTATTTATTTA	9498	False	NA	-1	True	NA	NA	NA	154411816	154401980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_154402321_154402350_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
Isoform_103959_34	chr2	-	2305	7	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	-434	intron_retention	FALSE	non_canonical	0	0	junction_1	473.966741683657	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAATGGAGCGTTTAT	9541	False	NA	-8	True	NA	NA	NA	154411773	154401987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_154402321_154402350_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154411408
Isoform_103960_43	chr2	-	2745	7	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	0	intron_retention	TRUE	non_canonical	0	0	junction_1	473.966741683657	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9541	False	NA	-21	True	AATAAA	-16	NA	154411773	154401553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_154402318_154402341_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154411408
Isoform_103968_25	chr2	-	1185	4	ISM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	39	3175	39	-2948	5prime_fragment	FALSE	canonical	3	965	junction_3	42.6953028902348	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	9541	False	NA	NA	False	NA	NA	NA	154411773	154404501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_154405011_154405814_154406035_154406337_154406429_154411408
Isoform_103972_31	chr2	-	1841	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	24	924	4	-924	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAATCTTAATCATATA	NA	False	NA	-9	True	NA	NA	NA	154445604	154428601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
Isoform_103973_135	chr2	-	964	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	-1	1826	-1	-1826	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCTGTGGCTTGATTC	NA	False	NA	1	True	NA	NA	NA	154445629	154429503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
Isoform_103977_5	chr2	-	2780	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	8	1	8	-1	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGCTTTGCAGTCGTT	NA	False	NA	NA	False	NA	NA	NA	154445620	154427678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
Isoform_103978_5	chr2	-	558	3	FSM	ENSMUSG00000000876.12	ENSMUST00000109703.3	560	3	-12	14	8	-14	multi-exon	FALSE	canonical	0	0	junction_1	94.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTAAGTCTAAGTTGCA	NA	False	NA	NA	False	AATAAA	-16	NA	154445620	154437179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154437491_154438121_154438185_154445436
Isoform_104001_824	chr2	-	2405	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	129	8	2	0	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3761	False	NA	-16	True	AATAAA	-24	NA	154734726	154713337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
Isoform_104003_208	chr2	-	2452	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	83	7	-21	1	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGCTCCATTGCTTTT	3715	False	NA	-15	True	AATAAA	-25	NA	154734772	154713336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
Isoform_104004_6720	chr2	-	1394	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	129	1019	2	-1011	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	6720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCGATCTGTCCTTCAG	3761	False	NA	-17	True	ATTAAA	-23	NA	154734726	154714348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
Isoform_104006_1782	chr2	-	1449	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	68	1025	-36	-1017	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGAAGTCGATCTGTC	3700	False	NA	-23	True	ATTAAA	-17	NA	154734787	154714354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
Isoform_10401_10	chr10	-	165	1	Intergenic	novelGene_1174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATATGATCTTTCTT	NA	False	NA	-6	True	NA	NA	NA	112867656	112867491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_112867500_112867700
Isoform_104045_519	chr2	-	2119	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	41	383	-9	-383	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGTGCATGTATGTGG	NA	False	NA	-23	True	ATTAAA	-18	NA	154916376	154901612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
Isoform_104046_63	chr2	-	2122	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	0	421	0	-421	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTTGGCTCTATTAA	NA	False	NA	-61	True	GATAAA	-20	NA	154916417	154901650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
Isoform_104047_149	chr2	-	2499	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	41	3	-9	-3	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGTCTAAGTACCCT	NA	False	NA	-11	True	AATAAA	-27	NA	154916376	154901232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
Isoform_10405_3	chr10	-	163	1	Intergenic	novelGene_1175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAACAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	114842206	114842043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_114842000_114842200
Isoform_104054_14	chr2	-	2158	9	NIC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-9	-421	intron_retention	FALSE	canonical	0	0	junction_5	377.087854484867	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTTGGCTCTATTAA	NA	False	NA	-61	True	GATAAA	-20	NA	154916376	154901650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
Isoform_104057_23	chr2	-	1681	12	FSM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	-48	3	-48	-2	multi-exon	FALSE	canonical	3	155	junction_4	21.4987987363815	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTGTTCTGATGACA	NA	False	NA	-3	True	AATAAA	-20	NA	155199398	155120165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
Isoform_104060_7	chr2	-	7084	15	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	34	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	44.4323034720994	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGGTATGTTATTG	NA	False	NA	-21	True	AATAAA	-15	NA	155315780	155232586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394_155250371_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
Isoform_104063_176	chr2	-	4042	14	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	3	120	junction_7	19.2079865046321	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGGTATGTTATTG	NA	False	NA	-21	True	AATAAA	-15	NA	155315714	155232586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
Isoform_104064_19	chr2	-	4141	14	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	120	junction_7	19.2079865046321	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGGTATGTTATTG	NA	False	NA	-21	True	AATAAA	-15	NA	155315813	155232586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
Isoform_104067_21	chr2	-	2424	14	ISM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	8250	7	356	-7	3prime_fragment	FALSE	canonical	2	7	junction_10	4.74933816628712	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGACTCTGGCTTGATT	8957	False	NA	NA	False	ATTAAA	-17	NA	155348518	155332305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245
Isoform_104069_7	chr2	-	2585	15	FSM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	21	8	21	-8	multi-exon	FALSE	canonical	1	3	junction_14	5.44593089061054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGACTCTGGCTTGAT	728	False	NA	NA	False	ATTAAA	-16	NA	155356747	155332306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245_155348482_155356548
Isoform_104084_3258	chr2	-	1877	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	81	5	-2	3	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	3258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGACTCATTGTTTCA	8431	False	NA	-7	True	AATAAA	-14	NA	155434649	155405105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
Isoform_104085_243	chr2	-	1928	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	30	5	30	3	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGACTCATTGTTTCA	8380	False	NA	-7	True	AATAAA	-14	NA	155434700	155405105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
Isoform_104090_42	chr2	-	1785	13	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	2	18	junction_3	290.295347687297	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCAATGACTCATTGTTT	8431	False	NA	-9	True	AATAAA	-12	NA	155434649	155405107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409702_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
Isoform_104098_59	chr2	-	3114	19	FSM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	0	-23	0	-14	multi-exon	FALSE	canonical	3	16	junction_11	88.2006865682525	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGATGTGGACCTGAC	NA	False	NA	-7	True	AATAAA	-37	NA	155534252	155476204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492482_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
Isoform_104099_19	chr2	-	3148	19	FSM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	-34	-23	16	-14	multi-exon	FALSE	canonical	3	16	junction_11	88.2006865682525	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGATGTGGACCTGAC	NA	False	NA	-7	True	AATAAA	-37	NA	155534286	155476204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492482_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
Isoform_10410_4	chr10	-	783	1	FSM	ENSMUSG00000020137.6	ENSMUST00000218989.2	527	1	-340	84	-340	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	2020	False	NA	NA	False	NA	NA	NA	115220688	115219905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115219900_115220700
Isoform_104105_1241	chr2	-	3145	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	53	6	1	-6	multi-exon	TRUE	canonical	3	309	junction_12	37.6501520663235	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGACCTGACTTTGTCCA	NA	False	NA	1	True	AATAAA	-45	NA	155534251	155476196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
Isoform_104106_401	chr2	-	3172	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	18	14	16	-14	multi-exon	FALSE	canonical	3	309	junction_12	37.6501520663235	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGATGTGGACCTGAC	NA	False	NA	-7	True	AATAAA	-37	NA	155534286	155476204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
Isoform_10411_14	chr10	+	2268	1	Genic_Genomic	ENSMUSG00000034163.11	novel	NA	NA	NA	NA	-26	-43674	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	AATAGA	-9	NA	115220837	115223105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_115220800_115223100
Isoform_104113_30	chr2	-	2112	10	ISM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	60	347	60	-347	intron_retention	FALSE	canonical	3	287	junction_6	14.4435897183012	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACATGCTGGATTCT	NA	False	NA	-8	True	AATAAA	-18	NA	155571335	155543943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810
Isoform_104114_514	chr2	-	1874	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	69	347	69	-347	multi-exon	FALSE	canonical	3	287	junction_6	17.8672885463911	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACATGCTGGATTCT	NA	False	NA	-8	True	AATAAA	-18	NA	155571326	155543943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
Isoform_104117_9	chr2	-	1658	10	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	80	-340	combination_of_known_splicesites	TRUE	canonical	3	9	junction_5	100.051961808494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCTGGATTCTTGATAAA	NA	False	NA	-1	True	AATAAA	-25	NA	155571315	155543936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
Isoform_104119_8	chr2	-	1404	2	FSM	ENSMUSG00000074649.7	ENSMUST00000124586.2	1615	2	212	-1	212	1	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTACAAACCTATGAATC	7311	False	NA	NA	False	NA	NA	NA	155661134	155659648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155661004_155661085
Isoform_10412_6	chr10	-	156	1	Intergenic	novelGene_1176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	115227885	115227729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_115227700_115227900
Isoform_104122_1577	chr2	-	1244	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	251	5	-11	0	multi-exon	TRUE	canonical	3	1052	junction_5	244.745255316625	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGTGCTGTGTGTG	NA	False	NA	-8	True	ATTAAA	-17	NA	155668594	155661756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
Isoform_104123_27	chr2	-	1306	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	189	5	30	0	multi-exon	FALSE	canonical	3	1052	junction_5	244.745255316625	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGTGCTGTGTGTG	NA	False	NA	-8	True	ATTAAA	-17	NA	155668656	155661756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
Isoform_10413_6	chr10	-	1950	1	Antisense	novelGene_ENSMUSG00000112822.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115232460	115230510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_115230500_115232500
Isoform_104134_694	chr2	-	2398	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	261	-26	1	-1	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCCTGGAATGGATGG	NA	False	NA	-32	True	AATAAA	-19	NA	155771969	155688814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
Isoform_10414_9	chr10	-	182	1	Intergenic	novelGene_1177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTAAGACT	3246	False	NA	NA	False	NA	NA	NA	115312374	115312192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_115312200_115312400
Isoform_104144_51	chr2	-	2412	10	FSM	ENSMUSG00000005882.19	ENSMUST00000136933.8	2413	10	0	1	0	-1	multi-exon	FALSE	canonical	3	22	junction_7	134.914879429061	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCCTGGAATGGATGG	NA	False	NA	-32	True	AATAAA	-19	NA	155771980	155688814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752388_155753660_155753757_155763554_155763648_155771932
Isoform_104147_14	chr2	-	2289	9	NIC	ENSMUSG00000005882.19	novel	2633	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_3	140.423856146312	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTCCTGGAATGGATG	NA	False	NA	-33	True	AATAAA	-18	NA	155771970	155688815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155690447_155693278_155693393_155700031_155700110_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
Isoform_104164_120	chr2	-	3488	17	FSM	ENSMUSG00000074643.13	ENSMUST00000109608.9	3492	17	9	-5	1	0	multi-exon	FALSE	canonical	3	55	junction_15	81.3740399328926	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCCGCTCTTGTTGTGT	NA	False	NA	0	True	AATAAA	-21	NA	155953854	155913761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
Isoform_104165_74	chr2	-	3508	17	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_15	70.9506595723394	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCGCTCTTGTTGTGTT	NA	False	NA	1	True	AATAAA	-22	NA	155953841	155913760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945350_155953705
Isoform_104166_503	chr2	-	3423	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	18	0	-12	0	multi-exon	FALSE	canonical	3	257	junction_15	28.8510350286124	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953841	155913764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
Isoform_104167_192	chr2	-	3462	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	-20	-1	0	1	multi-exon	FALSE	canonical	3	257	junction_15	28.8510350286124	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGCCGCTCTTGTTGT	NA	False	NA	-2	True	AATAAA	-19	NA	155953879	155913763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
Isoform_104170_16	chr2	-	3341	16	NIC	ENSMUSG00000074643.13	novel	3441	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	83.2064634241569	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953879	155913764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953825
Isoform_104172_100	chr2	-	3674	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	35	2926	-5	2601	multi-exon	FALSE	canonical	3	132	junction_2	80.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATTGTATGTACCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	155953841	155936803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155940293_155945268_155945318_155953705
Isoform_104177_378	chr2	-	3725	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	18	2924	18	2603	multi-exon	FALSE	canonical	3	245	junction_2	24	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTATGTACCTTTAT	NA	False	NA	-12	True	AATAAA	-16	NA	155953858	155936801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155940293_155945268_155945350_155953705
Isoform_104178_32	chr2	-	3966	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	35	2666	-5	-2666	multi-exon	FALSE	canonical	3	245	junction_2	24	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGGTTTGACCGCCAA	NA	False	NA	-2	True	AATAAA	-22	NA	155953841	155936543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155940293_155945268_155945350_155953705
Isoform_10418_19	chr10	+	175	1	Intergenic	novelGene_1178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATGATTTGGG	NA	False	NA	NA	False	NA	NA	NA	115761375	115761550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_115761400_115761600
Isoform_104181_21	chr2	-	6671	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	-4	0	1	0	multi-exon	FALSE	canonical	3	245	junction_2	24	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCACAGTACTTCTTTG	NA	False	NA	-2	True	AATAAA	-37	NA	155953880	155933877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155940293_155945268_155945350_155953705
Isoform_104185_659	chr2	-	2037	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	13	1	7	-1	multi-exon	TRUE	canonical	3	228	junction_1	23.0952135493242	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCCTTGAATTTTTGAG	3119	False	NA	-3	True	AATAAA	-16	NA	155986093	155965559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
Isoform_10419_12	chr10	+	174	1	Intergenic	novelGene_1179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTTACATTGTACAAC	NA	False	NA	NA	False	NA	NA	NA	115801625	115801799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_115801600_115801800
Isoform_104190_21	chr2	-	1553	9	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	5502	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	81.7823903722556	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTTCCTGTCCTGATCC	3228	False	NA	-16	True	AATAAA	-3	NA	155976227	155965572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976098
Isoform_104192_12	chr2	-	2969	13	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	76.714115751637	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTCCTGATCCTTGA	3107	False	NA	-12	True	AATAAA	-7	NA	155986105	155965568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_155966630_155966653_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
Isoform_10420_13	chr10	-	205	1	Intergenic	novelGene_1180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGTGGGTGAAGCTAA	NA	False	NA	NA	False	NA	NA	NA	115817670	115817465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_115817500_115817700
Isoform_10421_10	chr10	-	2639	1	FSM	ENSMUSG00000074734.4	ENSMUST00000099261.3	2254	1	-387	2	-387	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTTTTATGTTTTGG	NA	False	NA	NA	False	AATAAA	-40	NA	115950209	115947570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115947600_115950200
Isoform_104222_130	chr2	-	2768	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	383	junction_15	737.860411025805	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022068	155989165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
Isoform_104225_46	chr2	-	2111	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	383	junction_15	737.860411025805	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022107	155989861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
Isoform_104226_597	chr2	-	2705	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	10	-4	-1	1	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTTTCGTTTTTCAA	NA	False	NA	NA	False	AATAAA	-21	NA	156022077	155989164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
Isoform_104228_372	chr2	-	2032	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	-16	695	1	-4	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGCAGTGTGCTCATTA	NA	False	NA	-4	True	AATAAA	-11	NA	156022103	155989863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
Isoform_10423_35	chr19	-	182	1	Intergenic	novelGene_5856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	45549936	45549754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45549800_45549900
Isoform_10424_3	chr10	-	3314	1	Intergenic	novelGene_707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGACTTAACAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-2	NA	4063638	4060324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_4060300_4063600
Isoform_104250_39	chr2	-	2711	17	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	198	junction_12	654.785291025806	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTTTCGTTTTTCAA	NA	False	NA	NA	False	AATAAA	-21	NA	156022068	155989164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
Isoform_10427_5	chr10	+	875	1	Intergenic	novelGene_1181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACAGCTGACTACTGGG	NA	False	NA	NA	False	NA	NA	NA	116397482	116398357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_116397500_116398400
Isoform_104271_127	chr2	-	2823	18	FSM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	-10	-693	-2	-1	multi-exon	FALSE	canonical	3	383	junction_15	717.627699835322	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAATTTTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	156022106	155989166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
Isoform_104275_635	chr2	-	2745	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	57	8	3	-1	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAATTTTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	156022101	155989166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
Isoform_104277_86	chr2	-	2778	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	24	8	-2	-1	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAATTTTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	156022134	155989166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
Isoform_10429_5	chr10	+	1950	1	FSM	ENSMUSG00000052291.9	ENSMUST00000218139.2	2235	1	282	3	-13	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTCGCACCGAAAACT	NA	False	NA	NA	False	AATAAA	-32	NA	116417467	116419417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_116417500_116419400
Isoform_104307_89	chr2	-	771	3	FSM	ENSMUSG00000027620.17	ENSMUST00000137340.2	715	3	-37	-19	2	17	multi-exon	FALSE	canonical	3	533	junction_1	908	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAGAAAAAGAACAGAAG	NA	False	NA	-15	True	AATAGA	-25	NA	156022102	156020461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156020873_156021096_156021161_156021806
Isoform_10431_12	chr10	+	173	1	Intergenic	novelGene_1182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAATAA	8991	False	NA	NA	False	NA	NA	NA	116817795	116817968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_116817800_116818000
Isoform_104310_67	chr2	-	995	2	FSM	ENSMUSG00000027620.17	ENSMUST00000128243.2	1008	2	30	-17	2	17	multi-exon	FALSE	canonical	3	2349	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAGAAAAAGAACAGAAG	NA	False	NA	-15	True	AATAGA	-25	NA	156022102	156020461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156021161_156021806
Isoform_104315_343	chr2	-	583	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	220	0	220	0	multi-exon	FALSE	canonical	3	384	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTGTCTTGCGTT	NA	False	NA	-4	True	AATAAA	-23	NA	156154447	156153765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156154323_156154421
Isoform_104316_8	chr2	-	781	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	21	1	21	-1	multi-exon	FALSE	canonical	3	384	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGCTGTGTCTTGCGT	NA	False	NA	-5	True	AATAAA	-22	NA	156154646	156153766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156154323_156154421
Isoform_104317_5	chr2	-	844	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	-41	0	-41	0	multi-exon	FALSE	canonical	3	384	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTGTCTTGCGTT	NA	False	NA	-4	True	AATAAA	-23	NA	156154708	156153765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156154323_156154421
Isoform_104318_13	chr2	-	3322	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-7	2342	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	68.6164865190737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681727	156672626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681335
Isoform_104319_5	chr2	-	3425	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-18	2342	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	68.6164865190737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681830	156672626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681335
Isoform_10432_18	chr10	-	180	1	Intergenic	novelGene_1183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCATATTGAAA	NA	False	NA	NA	False	NA	NA	NA	116866085	116865905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_116865900_116866100
Isoform_104320_17	chr2	-	3288	4	FSM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	-72	-2342	0	2342	multi-exon	FALSE	canonical	3	47	junction_3	57.393379409127	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681812	156672626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156675347_156679742_156679834_156680337_156680457_156681454
Isoform_104321_52	chr2	-	3211	4	FSM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	5	-2342	5	2342	multi-exon	FALSE	canonical	3	47	junction_3	57.393379409127	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681735	156672626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156675347_156679742_156679834_156680337_156680457_156681454
Isoform_104322_48	chr2	-	3023	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-8	2342	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	55.3915356550279	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681728	156672626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681635
Isoform_104323_24	chr2	-	3097	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	10	2342	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	55.3915356550279	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681802	156672626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681635
Isoform_104324_5	chr2	-	3275	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	16	2342	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	66.2382064974588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681704	156672626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_156675347_156675537_156675633_156679742_156679834_156680337_156680457_156681454
Isoform_104326_3	chr2	-	3091	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	18	2341	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	65.9052349969257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTTTCGTGTTTC	NA	False	NA	-1	True	NA	NA	NA	156681702	156672627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_156675347_156675537_156675633_156679742_156679834_156680337_156680457_156681635
Isoform_104327_3	chr2	-	2149	3	ISM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	20	3101	0	1672	5prime_fragment	FALSE	canonical	3	47	junction_2	63	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	156681720	156678069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_156679834_156680337_156680457_156681454
Isoform_104328_11	chr2	-	2636	17	FSM	ENSMUSG00000027634.15	ENSMUST00000069600.13	2612	17	-24	0	-11	0	multi-exon	FALSE	canonical	3	9	junction_1	53.8324948335111	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5903	False	NA	0	True	AATAAA	-22	NA	156833987	156769264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156770802_156771851_156771891_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
Isoform_10433_4	chr10	-	173	1	Intergenic	novelGene_1184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAAGAGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	116874297	116874124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_116874100_116874300
Isoform_104330_7	chr2	-	2741	16	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_15	44.4400220021948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5995	False	NA	-1	True	AATAAA	-21	NA	156833895	156769265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833681
Isoform_104332_263	chr2	-	2576	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	10	0	1	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5924	False	NA	0	True	AATAAA	-22	NA	156833966	156769264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
Isoform_104333_156	chr2	-	2620	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	-34	0	-34	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5880	False	NA	0	True	AATAAA	-22	NA	156834010	156769264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
Isoform_104339_15	chr2	-	2546	15	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_13	42.7715812574811	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5918	False	NA	0	True	AATAAA	-22	NA	156833972	156769264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156811956_156812059_156833918
Isoform_104342_8	chr2	-	3522	9	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	0	15	0	-3	intron_retention	FALSE	canonical	3	177	junction_5	19.9421037004625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTTGAAGTGTACAC	8134	False	NA	-21	True	AATAAA	-15	NA	156848995	156837199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087
Isoform_104346_5	chr2	-	5530	9	ISM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	12	-2005	12	913	intron_retention	FALSE	canonical	3	177	junction_5	19.9421037004625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCCTTCATTCAGAT	8146	False	NA	NA	False	AATAAA	-15	NA	156848983	156835179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087
Isoform_104347_8	chr2	-	2947	10	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	223	11	178	1	3prime_fragment	FALSE	canonical	3	171	junction_9	21.9027029168029	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAAGTGTACACTATG	8357	False	NA	-17	True	AATAAA	-19	NA	156848772	156837195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767
Isoform_104348_7	chr2	-	3164	10	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	5	12	5	0	intron_retention	FALSE	canonical	3	171	junction_9	21.9027029168029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGAAGTGTACACTAT	8139	False	NA	-18	True	AATAAA	-18	NA	156848990	156837196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767
Isoform_104352_142	chr2	-	2077	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	5	-2	5	2	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGTGACAGTGTGTCT	8139	False	NA	-4	True	AATAAA	-32	NA	156848990	156837182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
Isoform_104356_62	chr2	-	4081	11	FSM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	5	-2006	5	914	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCTTCATTCAGATT	8139	False	NA	NA	False	AATAAA	-16	NA	156848990	156835178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
Isoform_10436_15	chr10	+	170	1	Intergenic	novelGene_1185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	116895247	116895417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_116895200_116895400
Isoform_104361_9	chr2	-	2057	11	NNC	ENSMUSG00000027635.16	novel	2080	11	NA	NA	210	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	61.4528274369862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGAAGTGTACACTAT	8389	False	NA	-18	True	AATAAA	-18	NA	156848740	156837196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848650
Isoform_104364_20	chr2	-	2559	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103130.8	2636	11	91	-14	12	2	multi-exon	FALSE	canonical	3	12	junction_10	60.8885046622103	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGTGACAGTGTGTCT	8146	False	NA	-4	True	AATAAA	-32	NA	156848983	156837182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848894
Isoform_104367_6	chr2	-	2608	11	NNC	ENSMUSG00000027635.16	novel	2636	11	NA	NA	158	-2	intron_retention	TRUE	canonical	2	3	junction_10	63.4331143804244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACACTATGTGACAGTGT	8337	False	NA	-8	True	AATAAA	-28	NA	156848792	156837186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848650
Isoform_104370_5	chr2	-	7743	15	FSM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	121	0	121	0	multi-exon	FALSE	canonical	2	9	junction_5	3.79580864445326	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGCCTTTTATGTCTT	7640	False	NA	-2	True	NA	NA	NA	156921053	156857718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
Isoform_104371_3	chr2	-	3174	5	ISM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	115	23388	115	-2137	5prime_fragment	FALSE	canonical	2	14	junction_1	1.22474487139159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAGAAAAAA	7634	False	NA	NA	False	NA	NA	NA	156921059	156881106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
Isoform_104372_25	chr2	-	2123	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	-86	-1	0	1	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATATCTGCGGTTAGT	NA	False	NA	-4	True	AGTAAA	-19	NA	156977126	156941319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_104373_42	chr2	-	2043	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	-6	-1	-6	1	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATATCTGCGGTTAGT	NA	False	NA	-4	True	AGTAAA	-19	NA	156977046	156941319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_104375_141	chr2	-	2003	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	61	1862	2	6	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCGGTTAGTTCTTT	NA	False	NA	1	True	AGTAAA	-24	NA	156977124	156941314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_104376_39	chr2	-	3869	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	61	-4	2	4	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTCGAGTTACTGAATA	NA	False	NA	-1	True	ATTAAA	-22	NA	156977124	156939448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_104377_29	chr2	-	2065	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	-6	1867	-6	1	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATATCTGCGGTTAGT	NA	False	NA	-4	True	AGTAAA	-19	NA	156977191	156941319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_104381_4	chr2	-	1644	7	FSM	ENSMUSG00000027639.17	ENSMUST00000149313.8	1375	7	-267	-2	2	2	multi-exon	FALSE	canonical	1	2	junction_1	78.9887474405198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTGTTTTTATTC	NA	False	NA	NA	False	AATAAA	-13	NA	156977124	156961481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156962312_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_104382_4	chr2	-	1531	7	FSM	ENSMUSG00000027639.17	ENSMUST00000149313.8	1375	7	-154	-2	2	2	multi-exon	FALSE	canonical	1	2	junction_1	78.9887474405198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTGTTTTTATTC	NA	False	NA	NA	False	AATAAA	-13	NA	156977011	156961481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156962312_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_104383_95	chr2	-	4880	22	FSM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	-27	9	-5	-9	multi-exon	TRUE	canonical	3	54	junction_1	43.0171615808876	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAAACTATTGTACTT	NA	False	NA	NA	False	NA	NA	NA	157046459	156987821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
Isoform_104386_3	chr2	-	2923	17	ISM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	-6	17342	-6	3743	5prime_fragment	FALSE	canonical	3	55	junction_4	39.5343501748796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157046438	157005154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
Isoform_104388_55	chr2	-	2374	13	FSM	ENSMUSG00000027641.14	ENSMUST00000124518.2	2383	13	12	-3	-2	3	multi-exon	FALSE	canonical	3	92	junction_1	21.3559450478992	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTTGTATACATGTTTT	NA	False	NA	-3	True	NA	NA	NA	157046434	157016902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
Isoform_10439_5	chr10	-	178	1	Intergenic	novelGene_1186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAGAAAGAAGTG	9547	False	NA	NA	False	NA	NA	NA	116922312	116922134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_116922100_116922300
Isoform_104392_288	chr2	-	2045	2	FSM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	10	1	4	-1	multi-exon	FALSE	canonical	3	207	junction_1	0	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGGTTTTATGTGGC	NA	False	NA	-13	True	AATAAA	-15	NA	157408247	157398282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_157400248_157408167
Isoform_104394_38	chr2	-	633	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	-4	0	4	multi-exon	FALSE	canonical	3	113	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGGCCAAATATGTATG	8707	False	NA	-9	True	NA	NA	NA	157439240	157437498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_157437906_157439014
Isoform_104395_10	chr2	-	712	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	-83	0	83	multi-exon	FALSE	canonical	3	113	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTGGTGGGAAGAAAGA	8707	False	NA	-1	True	AATAAA	-20	NA	157439240	157437419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_157437906_157439014
Isoform_10440_13	chr10	-	172	1	Intergenic	novelGene_1187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116933171	116932999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_116933000_116933200
Isoform_104402_594	chr2	-	3808	8	FSM	ENSMUSG00000027650.13	ENSMUST00000029179.11	3830	8	22	0	22	0	multi-exon	FALSE	canonical	3	173	junction_3	12.5746749055231	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870331	157823722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
Isoform_104408_30	chr2	-	5630	7	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	22	0	intron_retention	FALSE	canonical	3	176	junction_6	11.066716867356	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870331	157823722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_157824381_157834887_157834976_157835273_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
Isoform_10441_5	chr10	-	170	1	Intergenic	novelGene_1188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGAGGCCGGGTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	116960516	116960346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_116960300_116960500
Isoform_104424_546	chr2	-	3550	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	44	2	1	-2	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGGTCTGCCTTGTCCT	8850	False	NA	NA	False	AATAAA	-20	NA	157988312	157958323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
Isoform_104425_561	chr2	-	3519	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	72	5	2	-5	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACAAGGTCTGCCTTGT	8878	False	NA	NA	False	AATAAA	-17	NA	157988284	157958326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
Isoform_104426_18	chr2	-	3632	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	-38	2	-38	-2	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGGTCTGCCTTGTCCT	8768	False	NA	NA	False	AATAAA	-20	NA	157988394	157958323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
Isoform_104433_12	chr2	-	858	6	FSM	ENSMUSG00000085385.8	ENSMUST00000133449.8	933	6	61	14	0	6	multi-exon	FALSE	canonical	2	8	junction_3	32.8048776861003	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8350	False	NA	-11	True	AATAAA	-18	NA	158203439	158197698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_158197962_158199117_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
Isoform_104434_5	chr2	-	2925	6	FSM	ENSMUSG00000085385.8	ENSMUST00000133449.8	933	6	71	-2063	1	-2	multi-exon	FALSE	canonical	2	8	junction_3	32.8048776861003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTCTCGTGAGTTC	8360	False	NA	0	True	NA	NA	NA	158203429	158195621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_158197962_158199117_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
Isoform_104435_3	chr2	-	807	6	NIC	ENSMUSG00000085385.8	novel	933	6	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	35.0542436803306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCTGTGTCAACCCAT	8347	False	NA	-2	True	AATAAA	-27	NA	158203442	158197689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_158197962_158199117_158199184_158201101_158201252_158202446_158202520_158202862_158202991_158203324
Isoform_104436_6	chr2	-	964	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	35.4310598204457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8350	False	NA	-11	True	AATAAA	-18	NA	158203439	158197698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202378_158202520_158202862_158202991_158203324
Isoform_104438_3	chr2	-	1304	5	NIC	ENSMUSG00000085385.8	novel	1553	6	NA	NA	-8	6	intron_retention	FALSE	canonical	3	34	junction_3	25.5147016443461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8339	False	NA	-11	True	AATAAA	-18	NA	158203450	158197698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862
Isoform_104439_31	chr2	-	962	6	NIC	ENSMUSG00000085385.8	novel	933	6	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.4059821413245	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8347	False	NA	-11	True	AATAAA	-18	NA	158203442	158197698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158202991_158203324
Isoform_104440_6	chr2	-	3036	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.4059821413245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTCTCGTGAGTTC	8350	False	NA	0	True	NA	NA	NA	158203439	158195621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158202991_158203324
Isoform_104441_3	chr2	-	1100	6	NIC	ENSMUSG00000085385.8	novel	1553	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	36.7456119829293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCAGTCTGCCTTTTAA	8328	False	NA	-18	True	AATAAA	-11	NA	158203461	158197705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158203117_158203324
Isoform_104443_18	chr2	-	890	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	30.9476978142155	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8356	False	NA	-11	True	AATAAA	-18	NA	158203433	158197698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202446_158202520_158202862_158202991_158203324
Isoform_104445_14	chr2	-	2347	4	ISM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	-20	14	0	6	intron_retention	FALSE	canonical	3	82	junction_3	6.79869268479038	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8327	False	NA	-11	True	AATAAA	-18	NA	158203462	158197698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862
Isoform_104446_18	chr2	-	1989	5	FSM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	3	15	0	5	multi-exon	FALSE	canonical	3	64	junction_4	13.2193040664023	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGCCTTTTAAATCTGT	8350	False	NA	-12	True	AATAAA	-17	NA	158203439	158197699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862_158202991_158203324
Isoform_104447_7	chr2	-	4068	5	FSM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	3	-2064	0	-1	multi-exon	FALSE	canonical	3	64	junction_4	13.2193040664023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTCTCGTGAGTTCT	8350	False	NA	1	True	NA	NA	NA	158203439	158195620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862_158202991_158203324
Isoform_104449_4	chr2	-	3924	4	FSM	ENSMUSG00000085385.8	ENSMUST00000149667.8	3896	4	-29	1	0	-1	multi-exon	FALSE	canonical	3	64	junction_3	13.8884444373331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCAGTCTGCCTTTTAA	8327	False	NA	-18	True	AATAAA	-11	NA	158203462	158197705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_158197962_158199117_158202520_158202862_158202991_158203324
Isoform_10445_4	chr14	-	200	1	FSM	ENSMUSG00000063556.6	ENSMUST00000099431.6	468	1	316	-48	316	48	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATGGATT	NA	False	NA	NA	False	AATATA	-16	NA	77489438	77489238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_77489200_77489400
Isoform_104450_20	chr2	-	3904	4	FSM	ENSMUSG00000050700.12	ENSMUST00000109454.8	3396	4	-3	-505	-3	505	multi-exon	FALSE	canonical	2	7	junction_1	4.64279609239471	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAGTTTTGCTACTGTT	NA	False	NA	1	True	NA	NA	NA	160754240	160747851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_160751096_160751526_160751751_160752661_160752785_160753927
Isoform_104452_18	chr2	-	4079	4	FSM	ENSMUSG00000050700.12	ENSMUST00000057169.5	3547	4	-26	-506	-26	505	multi-exon	FALSE	canonical	2	5	junction_1	5.55777733351102	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAGTTTTGCTACTGTT	NA	False	NA	1	True	NA	NA	NA	160754274	160747851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_160751237_160751526_160751751_160752661_160752785_160753927
Isoform_104454_22	chr2	-	4045	4	FSM	ENSMUSG00000050700.12	ENSMUST00000057169.5	3547	4	8	-506	-3	505	multi-exon	FALSE	canonical	2	5	junction_1	5.55777733351102	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAGTTTTGCTACTGTT	NA	False	NA	1	True	NA	NA	NA	160754240	160747851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_160751237_160751526_160751751_160752661_160752785_160753927
Isoform_104457_7	chr2	-	1454	10	ISM	ENSMUSG00000057133.15	ENSMUST00000138078.8	3092	17	24	17848	24	4	5prime_fragment	FALSE	canonical	3	41	junction_1	19.8997487421324	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACGTGTATTTGACTGGG	NA	False	NA	NA	False	CATAAA	-19	NA	160950971	160867801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
Isoform_104458_3	chr2	-	1085	7	ISM	ENSMUSG00000057133.15	ENSMUST00000134178.8	3608	23	0	46659	0	-4	5prime_fragment	FALSE	canonical	3	17	junction_4	26.954694499392	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACACTAAAGGGTCTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	160950942	160871762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_160871882_160872666_160872730_160881113_160881264_160883904_160884050_160894307_160894826_160901838_160901895_160950908
Isoform_104459_11	chr2	-	1156	7	ISM	ENSMUSG00000057133.15	ENSMUST00000138078.8	3092	17	-11	21805	-11	0	5prime_fragment	FALSE	canonical	3	60	junction_4	13.7931142241337	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAAGGGTCTTCTATAT	NA	False	NA	NA	False	AATAAA	-17	NA	160951006	160871758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
Isoform_104463_416	chr2	-	1574	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	46	0	46	0	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTGTGTTGTTTCTT	NA	False	NA	-4	True	NA	NA	NA	163261402	163247741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
Isoform_104465_95	chr2	-	1630	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	-15	5	-15	-5	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGTATTGTGTGTTGT	NA	False	NA	-9	True	NA	NA	NA	163261463	163247746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
Isoform_104475_27	chr2	-	3925	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	42	0	42	0	multi-exon	FALSE	canonical	3	58	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCGGAGTTTGCTGTGT	NA	False	NA	-8	True	ATTAAA	-25	NA	163314507	163308298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163312039_163314322
Isoform_104476_9	chr2	-	3997	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	-31	1	-31	-1	multi-exon	FALSE	canonical	3	58	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCGGAGTTTGCTGTG	NA	False	NA	-9	True	ATTAAA	-24	NA	163314580	163308299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163312039_163314322
Isoform_104484_367	chr2	-	2276	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	22	1385	16	-1385	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGTGTATTTGTTTA	NA	False	NA	-5	True	ATTAAA	-20	NA	163487029	163466576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
Isoform_104486_23	chr2	-	3625	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	25	33	19	-33	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTTCAATAAAGGGTTT	NA	False	NA	NA	False	AATAAA	-29	NA	163487026	163465224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
Isoform_104489_23	chr2	-	3591	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	48	44	42	-44	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATGTAATAGAGTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	163487003	163465235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
Isoform_104490_59	chr2	-	1395	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	63	230	63	-230	multi-exon	FALSE	canonical	3	45	junction_1	12.1526108476007	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCACATGGTGAAT	NA	False	NA	-6	True	AATAAA	-18	NA	163592096	163568733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
Isoform_104491_6	chr2	-	1280	11	NNC	ENSMUSG00000017697.4	novel	1688	12	NA	NA	-5406	-231	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	21.0049994049036	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGCAGCACATGGTGAA	9401	False	NA	-7	True	AATAAA	-17	NA	163578192	163568734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163578126
Isoform_104492_3	chr2	-	5280	6	FSM	ENSMUSG00000035226.6	ENSMUST00000044734.3	4962	6	-326	8	-326	-8	multi-exon	TRUE	canonical	0	0	junction_1	1.26491106406735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCCTGGTTTTGCTCTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	163760929	163701678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163706042_163706785_163706926_163707372_163707475_163707711_163707825_163721013_163721153_163760506
Isoform_104493_4	chr2	-	2173	6	FSM	ENSMUSG00000035226.6	ENSMUST00000044734.3	4962	6	-326	3115	-326	-3115	multi-exon	FALSE	canonical	0	0	junction_1	1.26491106406735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGCCACTGCCCAGCCT	NA	False	NA	NA	False	AATAAA	-18	NA	163760929	163704785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163706042_163706785_163706926_163707372_163707475_163707711_163707825_163721013_163721153_163760506
Isoform_104498_14	chr2	-	1843	7	FSM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	459	0	459	0	multi-exon	FALSE	canonical	3	55	junction_6	196.655155030322	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	6407	False	NA	-5	True	ATTAAA	-16	NA	163912563	163895459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912386
Isoform_104500_870	chr2	-	1855	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	68	0	1	0	multi-exon	FALSE	canonical	3	532	junction_3	35.0606617165164	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	5949	False	NA	-5	True	ATTAAA	-16	NA	163913021	163895459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
Isoform_104505_11	chr2	-	2300	2	ISM	ENSMUSG00000040164.4	ENSMUST00000045196.4	2712	4	2398	1	2398	-1	3prime_fragment	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGGTCATGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	164010635	164005539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_164006936_164009731
Isoform_104507_6	chr2	-	492	3	FSM	ENSMUSG00000051769.3	ENSMUST00000063251.3	488	3	-23	19	-23	-19	multi-exon	FALSE	canonical	3	20	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAACTAAAAATACAT	NA	False	NA	NA	False	ATTAAA	-19	NA	164042073	164040801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164040933_164041577_164041737_164041871
Isoform_104508_8	chr2	-	2491	11	FSM	ENSMUSG00000016995.18	ENSMUST00000103103.10	2304	11	-203	16	-203	-16	multi-exon	FALSE	canonical	0	0	junction_1	0.458257569495584	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTCACGGGGTCGG	9971	False	NA	NA	False	NA	NA	NA	164246737	164231328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164231635_164231712_164231821_164234761_164234915_164235015_164235430_164238644_164238768_164238861_164238985_164239083_164239207_164241651_164241775_164242447_164243018_164243761_164243883_164246410
Isoform_104509_48	chr2	-	2453	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	5	0	-5	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTGTCAGTTTTAT	NA	False	NA	42	True	AATAAA	-19	NA	164285106	164266171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
Isoform_104514_187	chr2	-	1099	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	53	0	-7	0	multi-exon	TRUE	canonical	3	284	junction_4	26.9250812440743	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8219	False	NA	-1	True	AATAAA	-19	NA	164646749	164634687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
Isoform_104515_79	chr2	-	1130	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	22	0	21	0	multi-exon	FALSE	canonical	3	284	junction_4	26.9250812440743	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8188	False	NA	-1	True	AATAAA	-19	NA	164646780	164634687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
Isoform_104516_23	chr2	-	961	5	FSM	ENSMUSG00000017307.17	ENSMUST00000134611.4	1017	5	52	4	-7	-1	multi-exon	FALSE	canonical	3	55	junction_4	121.847240428333	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTGACCTTTAATAGA	8219	False	NA	-2	True	AATAAA	-18	NA	164646749	164634688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164646609
Isoform_104517_3	chr2	-	1571	5	NIC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	284	junction_3	30.0114561459453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8219	False	NA	-1	True	AATAAA	-19	NA	164646749	164634687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164634931_164636904_164637730_164641639_164641866_164644916_164645054_164646609
Isoform_104520_3	chr2	-	3545	4	NIC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	284	junction_2	30.4740326617051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8219	False	NA	-1	True	AATAAA	-19	NA	164646749	164634687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164637730_164641639_164641866_164644916_164645054_164646609
Isoform_104521_7	chr2	-	395	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	623	-4	623	4	multi-exon	FALSE	canonical	3	37	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGTCTCCTTGCCTCT	NA	False	NA	NA	False	AATAAA	-28	NA	164674753	164672647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164672908_164674618
Isoform_104523_3	chr2	-	583	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	434	-3	434	3	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGGGTCTCCTTGCCTC	NA	False	NA	NA	False	AATAAA	-27	NA	164674942	164672648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164672908_164674618
Isoform_104528_22	chr2	-	1950	15	FSM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	273	3	273	-3	multi-exon	FALSE	canonical	3	336	junction_14	23.0625812315366	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699189	164681440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
Isoform_104529_55	chr2	-	1909	15	FSM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	314	3	314	-3	multi-exon	FALSE	canonical	3	336	junction_14	23.0625812315366	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699148	164681440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
Isoform_104535_19	chr2	-	1775	16	NIC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	95.1360195836583	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699561	164681440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699464
Isoform_104537_635	chr2	-	1736	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	70	3	-8	-3	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699561	164681440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
Isoform_104538_142	chr2	-	1816	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	-10	3	-10	-3	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699641	164681440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
Isoform_104539_35	chr2	-	2180	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	-371	0	-371	0	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164700002	164681437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
Isoform_104544_16	chr2	-	1753	16	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_15	91.9865690679291	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGGTTTCTCTAGCTC	NA	False	NA	-3	True	NA	NA	NA	164699511	164681439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699437
Isoform_104548_6	chr2	-	4726	27	ISM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	495	10	495	-10	3prime_fragment	FALSE	canonical	3	65	junction_13	19.3627776871841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	164753182	164733811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541
Isoform_104549_14	chr2	-	4450	27	ISM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	771	10	771	-10	3prime_fragment	FALSE	canonical	3	65	junction_13	19.3627776871841	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	164752906	164733811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541
Isoform_104551_83	chr2	-	4426	28	FSM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	160	1	160	-1	multi-exon	TRUE	canonical	3	65	junction_13	19.1818958999235	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTTGTATATGTGCT	NA	False	NA	-1	True	AATAAA	-24	NA	164753517	164733802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
Isoform_104553_3	chr2	-	4777	26	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	528	-4	intron_retention	FALSE	canonical	3	65	junction_13	19.5409723401882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCTCTTTGTATATGT	NA	False	NA	-4	True	AATAAA	-21	NA	164753149	164733805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541
Isoform_104554_24	chr2	-	4505	27	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	159	-1	intron_retention	FALSE	canonical	3	65	junction_13	19.3627776871841	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTTGTATATGTGCT	NA	False	NA	-1	True	AATAAA	-24	NA	164753518	164733802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
Isoform_104555_4	chr2	-	4496	27	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	160	-10	intron_retention	FALSE	canonical	3	65	junction_13	18.9792786414942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	164753517	164733811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
Isoform_104557_60	chr2	-	3139	8	FSM	ENSMUSG00000039804.16	ENSMUST00000122070.2	3117	8	-18	-4	-3	1	multi-exon	TRUE	canonical	3	14	junction_1	35.3784207259344	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGCTAATCTTTCTT	3043	False	NA	-8	True	ATTAAA	-13	NA	164876726	164842278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
Isoform_104565_349	chr2	-	3116	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	61	2	-3	1	multi-exon	FALSE	canonical	3	73	junction_1	19.1790702249582	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGCTAATCTTTCTT	3043	False	NA	-8	True	ATTAAA	-13	NA	164876726	164842278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
Isoform_104566_23	chr2	-	3159	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	17	3	17	0	multi-exon	FALSE	canonical	3	73	junction_1	19.1790702249582	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTGCTAATCTTTCT	2999	False	NA	-9	True	ATTAAA	-12	NA	164876770	164842279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
Isoform_104569_17	chr2	-	3051	7	NIC	ENSMUSG00000039804.16	novel	3179	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	41.2812171439856	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAATCTTTCTTGG	3043	False	NA	-6	True	ATTAAA	-15	NA	164876726	164842276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164876602
Isoform_104570_9	chr2	-	4117	7	NIC	ENSMUSG00000039804.16	novel	3179	8	NA	NA	-3	1	intron_retention	FALSE	canonical	3	73	junction_1	20.1246117974981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGCTAATCTTTCTT	3043	False	NA	-8	True	ATTAAA	-13	NA	164876726	164842278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164852508_164854755_164855083_164865065_164865133_164876602
Isoform_104572_3	chr2	-	1998	5	ISM	ENSMUSG00000053166.15	ENSMUST00000138643.2	2521	11	45962	-825	45962	5	3prime_fragment	FALSE	canonical	3	18	junction_2	1.92028643696715	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGTGGTTACTAGCGG	NA	False	NA	0	True	NA	NA	NA	164977417	164953421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103
Isoform_104573_34	chr2	-	2075	6	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	92540	1	39146	-1	3prime_fragment	FALSE	canonical	2	10	junction_5	4.63033476111609	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTATCCTTGTGGTTAC	NA	False	NA	-6	True	NA	NA	NA	164984233	164953427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973
Isoform_104574_18	chr2	-	2303	7	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	90981	-2	37587	2	3prime_fragment	FALSE	canonical	2	10	junction_5	5.30461015427985	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCCTTGTGGTTACTAG	NA	False	NA	-3	True	NA	NA	NA	164985792	164953424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561
Isoform_104575_4	chr2	-	3126	11	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	53668	3	274	-3	3prime_fragment	TRUE	canonical	0	0	junction_10	8.62554346113913	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCGTTATCCTTGTGGTT	NA	False	NA	-8	True	NA	NA	NA	165023105	164953429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561_164985756_164988524_164988693_164999169_164999290_165012542_165012838_165022823
Isoform_104576_21	chr2	-	1984	6	ISM	ENSMUSG00000053166.15	ENSMUST00000138643.2	2521	11	39182	-826	39182	6	3prime_fragment	FALSE	canonical	1	4	junction_5	6.91664658631623	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGGTTACTAGCGGC	NA	False	NA	1	True	NA	NA	NA	164984197	164953420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164984035
Isoform_104583_17	chr2	-	1827	11	NIC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	81.3242891146304	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5721	False	NA	-34	True	AATAAA	-18	NA	165129728	165118473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125328_165125447_165125524_165129703
Isoform_104584_30	chr2	-	1991	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109298.8	1991	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	78.2020175926143	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5774	False	NA	-34	True	AATAAA	-18	NA	165129675	165118473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129603
Isoform_104585_148	chr2	-	1977	10	NIC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	0	3	intron_retention	TRUE	canonical	3	63	junction_9	61.9452167365908	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGGAGACTACCAGTG	5691	False	NA	-31	True	AATAAA	-21	NA	165129758	165118470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129703
Isoform_104587_246	chr2	-	1947	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	61	0	16	0	multi-exon	FALSE	canonical	3	110	junction_9	47.7596864973064	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5721	False	NA	-34	True	AATAAA	-18	NA	165129728	165118473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
Isoform_104588_85	chr2	-	1977	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	31	0	0	0	multi-exon	FALSE	canonical	3	110	junction_9	47.7596864973064	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5691	False	NA	-34	True	AATAAA	-18	NA	165129758	165118473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
Isoform_104592_23	chr2	-	3442	21	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	74.0802774022884	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168387	165131074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165132482_165134024_165134103_165136160_165136232_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
Isoform_104597_20	chr2	-	3502	22	FSM	ENSMUSG00000017670.17	ENSMUST00000074046.13	3502	22	10	-10	10	10	multi-exon	TRUE	canonical	1	2	junction_12	97.9880829442692	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACACCTCTTCCTCTG	NA	False	NA	-7	True	AATAAA	-25	NA	165168389	165131064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
Isoform_104599_14	chr2	-	3456	21	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	75.0502997995344	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGCTTCCTATCCACA	NA	False	NA	-19	True	AATAAA	-13	NA	165168397	165131076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152189_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
Isoform_104604_590	chr2	-	3453	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	13	0	13	0	multi-exon	FALSE	canonical	3	269	junction_20	30.5759300757965	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168386	165131074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
Isoform_104607_9	chr2	-	6361	20	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	12	-1	intron_retention	FALSE	canonical	3	269	junction_19	30.9689326946178	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168387	165131075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
Isoform_104612_53	chr2	-	5080	5	FSM	ENSMUSG00000017667.10	ENSMUST00000103084.4	8205	5	-48	3173	-48	-3173	multi-exon	FALSE	canonical	3	23	junction_1	3.24037034920393	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTGTGTGAGACTTTT	4492	False	NA	-4	True	ATTAAA	-13	NA	165230227	165219356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165223807_165224610_165224704_165225158_165225286_165228845_165228909_165229880
Isoform_104614_21	chr2	-	5113	5	NNC	ENSMUSG00000017667.10	novel	8205	5	NA	NA	-48	-3173	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	10.1827059272082	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTGTGTGAGACTTTT	4492	False	NA	-4	True	ATTAAA	-13	NA	165230227	165219356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_165223807_165224610_165224704_165225158_165225319_165228845_165228909_165229880
Isoform_104615_461	chr2	-	1871	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	0	9	0	-9	multi-exon	FALSE	canonical	3	240	junction_1	0	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACAGTTTTCGGAGA	NA	False	NA	-26	True	NA	NA	NA	165335244	165332038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165333632_165334966
Isoform_104618_10	chr2	-	2247	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	0	-367	0	367	multi-exon	FALSE	canonical	3	240	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGAGTGGTGGGCTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	165335244	165331662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165333632_165334966
Isoform_104625_16	chr2	-	3231	10	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	43844	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.4703784233791	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165650198	165626073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_165626691_165626710_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438
Isoform_104627_11	chr2	-	3234	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.338186851215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	165740930	165627227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_104628_3	chr2	-	4454	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	-60	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.338186851215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165740996	165626073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_104629_20	chr2	-	4343	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	51	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.338186851215	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165740885	165626073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_10463_28	chr10	+	172	1	Intergenic	novelGene_1189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGGGGGGAAAAAATGAG	4889	False	NA	NA	False	NA	NA	NA	117252875	117253047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_117252900_117253000
Isoform_104632_15	chr2	-	4433	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.691674028171	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740901	165626074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
Isoform_104634_5	chr2	-	4387	19	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	374	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	177.634395304124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165703551	165626074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
Isoform_104636_13	chr2	-	2729	10	NNC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	44190	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.3977759503657	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165649852	165626073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_165626691_165626710_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594
Isoform_104637_4	chr2	-	1941	9	ISM	ENSMUSG00000039671.19	ENSMUST00000109266.11	5072	22	49895	1156	43844	1	3prime_fragment	FALSE	canonical	3	102	junction_8	24.3871764458291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	165650198	165627227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594
Isoform_104641_4	chr2	-	4993	24	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.722379234749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165740901	165626073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_165626691_165626710_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_104642_4	chr2	-	4170	19	NIC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_18	176.898947578331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165700079	165626074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165699974
Isoform_104645_10	chr2	-	4205	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	168.212551861858	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165726596	165626074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527
Isoform_104648_54	chr2	-	4186	20	NIC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	51	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.186623243575	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740885	165626074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_104649_11	chr2	-	4137	19	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	394	1	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_18	174.419752321806	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165703531	165626073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703460
Isoform_104651_15	chr2	-	4294	20	NIC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	168.553681331215	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165726610	165626074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
Isoform_104652_6	chr2	-	3143	20	NNC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	174.44831918503	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	165740923	165627229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679256_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
Isoform_104653_20	chr2	-	4277	20	NIC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.564509023521	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740901	165626074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
Isoform_104654_15	chr2	-	4212	19	NNC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	394	1	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_18	174.693461685192	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165703531	165626073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
Isoform_104655_14	chr2	-	658	6	FSM	ENSMUSG00000039671.19	ENSMUST00000136842.2	629	6	14	-43	14	43	multi-exon	FALSE	canonical	3	218	junction_5	120.234104978579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTCTACCACCGAGC	NA	False	NA	NA	False	AATATA	-36	NA	165740922	165681917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_10468_41	chr10	-	177	1	Intergenic	novelGene_1190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAAAAGACTT	NA	False	NA	NA	False	NA	NA	NA	117494323	117494146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_117494100_117494300
Isoform_104694_35	chr2	-	3753	22	NIC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	236	3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_21	255.172272962579	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGACTTTTTTGCTCT	NA	False	NA	-7	True	NA	NA	NA	165996969	165915830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165996866
Isoform_104699_167	chr2	-	3780	21	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-62	1	combination_of_known_junctions	FALSE	canonical	3	105	junction_20	182.354352840836	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165996788	165915838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996597
Isoform_104703_682	chr2	-	3689	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	239	-1	239	1	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165996966	165915838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
Isoform_104704_659	chr2	-	3826	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	102	-1	102	1	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165997103	165915838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
Isoform_104708_301	chr2	-	3930	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	1	-4	1	-2	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997204	165915835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
Isoform_104710_36	chr2	-	4051	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	-123	-1	-123	1	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165997328	165915838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
Isoform_104714_234	chr2	-	3749	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	7	824	7	1	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165997576	165915832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
Isoform_104716_37	chr2	-	3853	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	-95	822	-95	3	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGACTTTTTTGCTCT	NA	False	NA	-7	True	NA	NA	NA	165997678	165915830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
Isoform_104719_31	chr2	-	3703	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_20	191.779143808705	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165996765	165915835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996654
Isoform_104729_6	chr2	-	3224	7	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	71	-1	intron_retention	FALSE	canonical	0	0	junction_6	13.2748718344933	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATTCTTGACTTTTTGT	NA	False	NA	-2	True	AATAAA	-16	NA	166349920	166341956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348119_166348706_166348871_166349381_166349480_166349807
Isoform_104731_8	chr2	-	3137	6	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	61	0	intron_retention	FALSE	canonical	3	12	junction_5	9.90757286120067	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTCTTGACTTTTTGTT	NA	False	NA	-1	True	AATAAA	-17	NA	166349930	166341955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348119_166348706_166348871_166349807
Isoform_104732_11	chr2	-	2790	4	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	64	-1	intron_retention	FALSE	canonical	3	17	junction_3	8.52447456836295	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATTCTTGACTTTTTGT	NA	False	NA	-2	True	AATAAA	-16	NA	166349927	166341956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166349807
Isoform_104733_5	chr2	-	2696	3	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	44	-17	intron_retention	FALSE	canonical	3	12	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349947	166341977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_166344399_166347371_166347507_166349807
Isoform_104737_60	chr2	-	6512	40	FSM	ENSMUSG00000039621.14	ENSMUST00000036719.12	6533	40	18	3	18	-3	multi-exon	FALSE	canonical	3	38	junction_37	7.40390997863488	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAAGGTGTGGCCTGCTT	NA	False	NA	NA	False	ATTAAA	-45	NA	166555734	166408264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
Isoform_104738_3	chr2	-	863	3	FSM	ENSMUSG00000039621.14	ENSMUST00000140624.2	437	3	-213	-213	17	0	multi-exon	FALSE	canonical	3	56	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166555735	166486301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166486792_166488893_166488966_166555434
Isoform_10474_11	chr10	+	185	1	Intergenic	novelGene_1191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAATCTCCGGCT	NA	False	NA	NA	False	NA	NA	NA	117562586	117562771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_117562600_117562800
Isoform_104741_59	chr2	-	2942	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	33	594	20	4	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTTTTCCAATTGAGC	NA	False	NA	-17	True	AATAAA	-13	NA	166838165	166790062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_104743_152	chr2	-	2811	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	33	725	20	-1	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTTGTTAATTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	166838165	166790193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_104745_112	chr2	-	2839	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	3	727	3	-3	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTTTTGTTAATTT	NA	False	NA	NA	False	AATAAA	-10	NA	166838195	166790195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_104746_46	chr2	-	2972	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	3	594	3	4	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTTTTCCAATTGAGC	NA	False	NA	-17	True	AATAAA	-13	NA	166838195	166790062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_104750_165	chr2	-	2829	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	20	127	20	-1	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTTGTTAATTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	166838165	166790193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_104751_91	chr2	-	2960	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	20	-4	20	4	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTTTTCCAATTGAGC	NA	False	NA	-17	True	AATAAA	-13	NA	166838165	166790062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_104766_3	chr2	-	7222	14	FSM	ENSMUSG00000039501.15	ENSMUST00000048988.14	7218	14	-10	6	-10	0	multi-exon	FALSE	canonical	3	14	junction_7	5.9245752350676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCTGTCATCTCTT	950	False	NA	NA	False	AATAAA	-12	NA	166904945	166877718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904429
Isoform_104767_19	chr2	-	6912	14	FSM	ENSMUSG00000039501.15	ENSMUST00000048988.14	7218	14	301	5	2	1	multi-exon	FALSE	canonical	3	14	junction_7	5.9245752350676	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCTGTCATCTCTTA	1261	False	NA	NA	False	AATAAA	-13	NA	166904634	166877717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904429
Isoform_104768_3	chr2	-	6915	14	NIC	ENSMUSG00000039501.15	novel	7218	14	NA	NA	-88	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	7.80911317120645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAAGCCTGTCATCTC	1171	False	NA	NA	False	AATAAA	-10	NA	166904724	166877720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904513
Isoform_104769_3	chr2	-	7130	14	NIC	ENSMUSG00000039501.15	novel	7218	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	7.80911317120645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCTGTCATCTCTT	958	False	NA	NA	False	AATAAA	-12	NA	166904937	166877718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904513
Isoform_104770_5	chr2	-	3710	2	FSM	ENSMUSG00000050556.10	ENSMUST00000207917.2	11153	2	26	7417	26	26	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGCACTTTATGTT	NA	False	NA	NA	False	NA	NA	NA	167030712	166945305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_166948280_167029976
Isoform_104772_56	chr2	-	1115	6	ISM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	19240	288	-12948	-288	3prime_fragment	FALSE	canonical	3	46	junction_5	14.8404851672713	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCTTCCAAATCGGG	NA	False	NA	-32	True	AATAAA	-21	NA	167063284	167045114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128
Isoform_104773_19	chr2	-	1784	10	FSM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	35	288	20	-288	multi-exon	FALSE	canonical	3	9	junction_8	29.1890390386528	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCTTCCAAATCGGG	5282	False	NA	-32	True	AATAAA	-21	NA	167082489	167045114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
Isoform_104774_9	chr2	-	1871	10	FSM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	-52	288	-52	-288	multi-exon	FALSE	canonical	3	9	junction_8	29.1890390386528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCTTCCAAATCGGG	5195	False	NA	-32	True	AATAAA	-21	NA	167082576	167045114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
Isoform_104775_4	chr2	-	1636	10	NNC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-16123	-287	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	30.924439973172	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	2930	False	NA	-31	True	AATAAA	-22	NA	167098647	167045113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167098570
Isoform_104776_4	chr2	-	1167	7	NNC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-13861	-288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.8675134594813	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCTTCCAAATCGGG	NA	False	NA	-32	True	AATAAA	-21	NA	167064197	167045114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167064141
Isoform_104783_185	chr2	-	4234	9	FSM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	-27	3	-27	-3	multi-exon	FALSE	canonical	3	218	junction_3	15.1244834622542	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGGTAGTCGTCTCT	NA	False	NA	-4	True	AGTAAA	-20	NA	167191130	167140366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
Isoform_104786_4	chr2	-	3800	4	NIC	ENSMUSG00000047030.16	novel	1531	4	NA	NA	-4	32	intron_retention	FALSE	canonical	0	0	junction_3	24.7790233867277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGTGTTCATGGTGTT	4587	False	NA	NA	False	AATAAA	-17	NA	167334802	167323320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_167326500_167327077_167327514_167328351_167328413_167334678
Isoform_104787_6	chr2	-	3933	4	NIC	ENSMUSG00000047030.16	novel	1531	4	NA	NA	2	32	intron_retention	FALSE	canonical	1	1	junction_2	24.9844396019247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGTGTTCATGGTGTT	4593	False	NA	NA	False	AATAAA	-17	NA	167334796	167323320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_167326500_167327077_167327514_167331088_167331289_167334678
Isoform_104788_121	chr2	-	3731	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	13	268	-2	32	multi-exon	FALSE	canonical	3	52	junction_2	1	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGTGTTCATGGTGTT	4595	False	NA	NA	False	AATAAA	-17	NA	167334794	167323320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_167326500_167327077_167327514_167334678
Isoform_104789_10	chr2	-	3999	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	13	0	-2	0	multi-exon	FALSE	canonical	3	52	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCGAAGATTTTTTTC	4595	False	NA	NA	False	ATTAAA	-17	NA	167334794	167323052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_167326500_167327077_167327514_167334678
Isoform_10479_3	chr10	+	169	1	Intergenic	novelGene_1192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATCTAAAAAAAAAAAAA	3907	False	NA	NA	False	NA	NA	NA	117633406	117633575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_117633400_117633600
Isoform_104795_85	chr2	-	1837	5	FSM	ENSMUSG00000078923.11	ENSMUST00000151365.8	924	5	9	-922	1	0	multi-exon	FALSE	canonical	3	48	junction_4	1117.10764924424	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9435	False	NA	NA	False	AATAAA	-22	NA	167473898	167449763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167471089_167471209_167473859
Isoform_104796_3088	chr2	-	1718	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	117	206	1	0	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	3088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9435	False	NA	NA	False	AATAAA	-22	NA	167473898	167449763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
Isoform_10480_376	chr10	+	210	1	Intergenic	novelGene_1193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATTTTTATGTTATTTCA	NA	False	NA	NA	False	NA	NA	NA	117686760	117686970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_117686800_117687000
Isoform_104804_281	chr2	-	2326	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	3	0	1	0	multi-exon	FALSE	canonical	3	221	junction_2	14.6205335059977	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTATTATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	167503473	167484527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
Isoform_10481_17	chr10	+	152	1	Intergenic	novelGene_1194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTATTAAAAAAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	117693596	117693748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_117693600_117693700
Isoform_104812_7	chr2	-	2289	5	ISM	ENSMUSG00000089739.3	ENSMUST00000125544.3	2367	8	-56	35375	-56	-35375	5prime_fragment	FALSE	canonical	3	221	junction_1	16.0214699700121	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTGCCGTGTGGTGT	NA	False	NA	-5	True	AATATA	-28	NA	167503472	167485144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
Isoform_104815_13	chr2	-	1292	2	FSM	ENSMUSG00000087648.2	ENSMUST00000129713.2	1309	2	19	-2	19	2	multi-exon	FALSE	canonical	3	24	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTAGCTACTTTATTTG	7148	False	NA	-2	True	NA	NA	NA	167996414	167994520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_167995672_167996273
Isoform_104819_45	chr2	-	5122	5	FSM	ENSMUSG00000051149.16	ENSMUST00000057793.11	4917	5	-208	3	-18	-3	multi-exon	FALSE	canonical	3	20	junction_3	74.0249113474647	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGCTTTTATTACA	2899	False	NA	-4	True	AATAAA	-22	NA	168049050	168022908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168046519_168046695_168048493
Isoform_10482_3	chr10	+	2860	1	FSM	ENSMUSG00000112614.2	ENSMUST00000218405.2	2410	1	-114	-336	-114	336	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAAGGGAGTCTCGTTC	NA	False	NA	NA	False	AATAAA	-36	NA	118089049	118091909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_118089000_118091900
Isoform_104821_247	chr2	-	4947	4	FSM	ENSMUSG00000051149.16	ENSMUST00000088001.6	4932	4	-18	3	-18	-3	multi-exon	FALSE	canonical	3	112	junction_3	29.1699998095456	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGCTTTTATTACA	2899	False	NA	-4	True	AATAAA	-22	NA	168049050	168022908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493
Isoform_104823_35	chr2	-	5112	4	FSM	ENSMUSG00000051149.16	ENSMUST00000088001.6	4932	4	-182	2	-182	-2	multi-exon	FALSE	canonical	3	112	junction_3	29.1699998095456	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGCTTTTATTACAC	2735	False	NA	-3	True	AATAAA	-23	NA	168049214	168022907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493
Isoform_104827_5	chr2	-	5276	12	FSM	ENSMUSG00000093752.2	ENSMUST00000138667.2	5288	12	4	8	4	-8	multi-exon	FALSE	canonical	2	6	junction_3	157.884464505636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAATATTTGCTTTTA	NA	False	NA	-9	True	AATAAA	-17	NA	168072280	168022913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168052350_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
Isoform_104828_22	chr2	-	4781	3	FSM	ENSMUSG00000051149.16	ENSMUST00000139984.8	434	3	-371	-3976	32	-6	multi-exon	FALSE	canonical	3	12	junction_2	76.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATATTTGCTTTTATT	2949	False	NA	-7	True	AATAAA	-19	NA	168049000	168022911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168027093_168029486_168029580_168048493
Isoform_104830_124	chr2	-	1038	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	19	1236	2	-2	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGCTGCTTTCATTT	NA	False	NA	-22	True	AATAAA	-20	NA	168072280	168052203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
Isoform_104832_168	chr2	-	851	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	17	1425	0	43	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGATTTTTATCAATGT	NA	False	NA	-4	True	ATTAAA	-17	NA	168072282	168052392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
Isoform_104833_7	chr2	-	2262	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	19	12	2	-12	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCATAGGACTATAATG	NA	False	NA	NA	False	ATTAAA	-15	NA	168072280	168050979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
Isoform_10484_5	chr10	+	166	1	Intergenic	novelGene_1195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	118932747	118932913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_118932700_118932900
Isoform_104842_21	chr2	-	2601	16	NIC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-72	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	72.489508819476	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	2929	False	NA	-26	True	GATAAA	-13	NA	168512338	168476360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168511919
Isoform_10485_11	chr10	+	175	1	Intergenic	novelGene_1196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACTCACA	NA	False	NA	NA	False	NA	NA	NA	118959144	118959319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_118959100_118959300
Isoform_104851_19	chr2	-	3135	23	ISM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	44836	1	-19157	-1	3prime_fragment	TRUE	canonical	3	231	junction_21	28.7459662998549	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	NA	False	NA	-24	True	GATAAA	-15	NA	168531423	168476358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218
Isoform_104858_263	chr2	-	3631	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	96	2	96	-2	multi-exon	FALSE	canonical	3	71	junction_27	47.3339708993171	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	NA	False	NA	-25	True	GATAAA	-14	NA	168576163	168476359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
Isoform_104859_37	chr2	-	3694	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	32	3	32	-3	multi-exon	FALSE	canonical	3	71	junction_27	47.3339708993171	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	NA	False	NA	-26	True	GATAAA	-13	NA	168576227	168476360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
Isoform_104863_260	chr2	-	3681	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109176.8	3691	28	9	1	9	-1	multi-exon	FALSE	canonical	3	157	junction_27	35.3190436202576	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	6470	False	NA	-24	True	GATAAA	-15	NA	168583873	168476358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
Isoform_104864_54	chr2	-	3748	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109176.8	3691	28	-58	1	-56	-1	multi-exon	FALSE	canonical	3	157	junction_27	35.3190436202576	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	6403	False	NA	-24	True	GATAAA	-15	NA	168583940	168476358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
Isoform_104865_46	chr2	-	3453	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109177.8	3456	28	0	3	0	-3	multi-exon	FALSE	canonical	2	6	junction_27	57.8025587882503	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	6290	False	NA	-26	True	GATAAA	-13	NA	168584053	168476360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168584007
Isoform_104876_9	chr2	-	1433	8	ISM	ENSMUSG00000027546.16	ENSMUST00000140188.8	2484	14	-154	16129	8	7777	5prime_fragment	FALSE	canonical	3	157	junction_7	36.2091430555368	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACAGTTAAATGGCCTG	6469	False	NA	NA	False	ATTAAA	-13	NA	168583874	168525127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
Isoform_104917_108	chr2	-	5107	4	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-175	-4	intron_retention	FALSE	canonical	3	69	junction_3	260.140133176119	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCGGGCTTGTGTGTA	NA	False	NA	-21	True	AATAAA	-18	NA	168607341	168590255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_168592381_168594373_168594661_168596353_168598721_168607013
Isoform_104920_718	chr2	-	5068	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	2	3	2	-3	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	-20	True	AATAAA	-19	NA	168609119	168590254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
Isoform_104922_44	chr2	-	5161	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	-92	4	-92	-4	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCGGGCTTGTGTGTA	NA	False	NA	-21	True	AATAAA	-18	NA	168609213	168590255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
Isoform_104934_21	chr2	-	3461	2	ISM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	82	5216	-2	1367	5prime_fragment	FALSE	canonical	3	532	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCTCTGTTTTCTTT	NA	False	NA	0	True	CATAAA	-22	NA	168609039	168595467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_168598721_168608831
Isoform_104936_85	chr2	-	1997	5	NIC	ENSMUSG00000027551.16	novel	2848	9	NA	NA	63	-8	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	9.69535971483266	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGAGGGATGTGAGCG	NA	False	NA	NA	False	AATAAA	-14	NA	168754490	168735258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168754153
Isoform_104937_13	chr2	-	2055	5	NIC	ENSMUSG00000027551.16	novel	2848	9	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	9.69535971483266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGATGTGAGCGTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	168754543	168735253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168754153
Isoform_104938_19	chr2	-	2538	9	FSM	ENSMUSG00000027551.16	ENSMUST00000109162.9	2848	9	308	2	-7	-2	multi-exon	FALSE	canonical	3	7	junction_4	271.408824469655	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATGTGAGCGTCATTT	NA	False	NA	NA	False	AATAAA	-20	NA	168797199	168735252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_104944_830	chr2	-	2439	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-6	5	-6	-5	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTATAGTTTGTATTGTAT	NA	False	NA	-5	True	AATAAA	-24	NA	168797198	168767285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_104945_138	chr2	-	2736	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-303	5	12	-5	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTATAGTTTGTATTGTAT	NA	False	NA	-5	True	AATAAA	-24	NA	168797495	168767285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_10495_37	chr10	+	178	1	Intergenic	novelGene_1198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATATCATTTTG	NA	False	NA	NA	False	NA	NA	NA	119143777	119143955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_119143800_119144000
Isoform_104951_70	chr2	-	997	6	FSM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	11	1	-6	-1	multi-exon	FALSE	canonical	3	129	junction_1	185.215982031789	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTACTGTTGTTACCAT	NA	False	NA	-2	True	TATAAA	-18	NA	168797198	168776733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_104962_20	chr2	-	5679	6	FSM	ENSMUSG00000052056.15	ENSMUST00000063710.13	5685	6	2	4	2	-1	multi-exon	FALSE	canonical	3	10	junction_5	10.6695829346793	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGGTGTCGTGGTTTT	NA	False	NA	-4	True	AATATA	-16	NA	169973138	169950566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169972967
Isoform_104964_14	chr2	-	1602	2	ISM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-41	-784	14	1	intron_retention	FALSE	canonical	3	77	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGAGGTGGTTTTTTT	4160	False	NA	-2	True	AATAAA	-19	NA	170191701	170189066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_170190069_170191101
Isoform_104966_10	chr2	-	1419	3	FSM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-41	-784	14	1	multi-exon	FALSE	canonical	3	10	junction_2	33.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGAGGTGGTTTTTTT	4160	False	NA	-2	True	AATAAA	-19	NA	170191701	170189066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_170190069_170191101_170191384_170191566
Isoform_104967_28	chr2	-	1314	3	FSM	ENSMUSG00000013523.14	ENSMUST00000152461.2	371	3	-1	-942	-1	1	multi-exon	FALSE	canonical	3	30	junction_2	23.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGAGGTGGTTTTTTT	4145	False	NA	-2	True	AATAAA	-19	NA	170191716	170189066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_170190069_170191101_170191384_170191686
Isoform_104969_8	chr2	-	1499	4	FSM	ENSMUSG00000013523.14	ENSMUST00000133673.8	688	4	-13	-798	-13	1	multi-exon	FALSE	canonical	3	7	junction_2	32.9983164553722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGAGGTGGTTTTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	170199046	170189066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_170190069_170191101_170191384_170198167_170198234_170198897
Isoform_10497_8	chr10	+	174	1	Intergenic	novelGene_1199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACCTATA	NA	False	NA	NA	False	NA	NA	NA	119251561	119251735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_119251600_119251700
Isoform_104976_147	chr2	-	1917	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	-14	2	1	-2	multi-exon	FALSE	canonical	3	87	junction_8	405.788969169937	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212440	172198117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
Isoform_104978_1604	chr2	-	1841	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	15	6	1	0	multi-exon	FALSE	canonical	3	1025	junction_8	140.198965759381	1604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	False	NA	-8	True	AATATA	-16	NA	172212440	172198115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
Isoform_10498_8	chr10	-	715	1	FSM	ENSMUSG00000093798.3	ENSMUST00000177767.3	1941	1	1309	-83	1309	83	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAACAATGTGGA	NA	False	NA	NA	False	TTTAAA	-7	NA	14621737	14621022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_14621000_14621700
Isoform_104986_22	chr2	-	2523	8	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1025	junction_7	145.890789459032	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212440	172198117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
Isoform_104991_20	chr2	-	2286	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	-294	1678	-294	-1678	multi-exon	FALSE	canonical	3	82	junction_3	13.8734358477712	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGTTAGGACGTTACA	NA	False	NA	-42	True	AATAAA	-12	NA	172782408	172711482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
Isoform_104993_88	chr2	-	2245	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	-249	1674	-249	-1674	multi-exon	TRUE	canonical	3	82	junction_3	13.8734358477712	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAGGACGTTACAGATA	NA	False	NA	-38	True	AATAAA	-16	NA	172782363	172711478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
Isoform_104998_88	chr2	-	2130	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	44	2364	44	1224	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTAGTTTTTTTTTTTT	1126	False	NA	-6	True	AATAAA	-14	NA	173118282	173068614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
Isoform_104999_19	chr2	-	2274	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	-99	2363	-99	1225	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTAGTTTTTTTTTTTTT	983	False	NA	-5	True	AATAAA	-15	NA	173118425	173068613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
Isoform_105001_19	chr2	-	2198	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	-24	2364	-24	1224	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTAGTTTTTTTTTTTT	1058	False	NA	-6	True	AATAAA	-14	NA	173118350	173068614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
Isoform_105002_7	chr2	-	4532	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	-2	8	-2	-8	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAATTTTCTCCCTTT	1080	False	NA	NA	False	AATAAA	-17	NA	173118328	173066258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
Isoform_105005_3	chr2	-	859	5	NIC	ENSMUSG00000055897.14	novel	755	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	3.67423461417477	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTGTCTCTTTCTCC	NA	False	NA	NA	False	ATTAAA	-11	NA	173501161	173437896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_173438321_173438832_173438981_173450525_173450673_173457275_173457370_173501115
Isoform_105008_34	chr2	+	1794	12	NIC	ENSMUSG00000027523.21	novel	1716	12	NA	NA	22	-3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	251.140045221883	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171835	174188534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_174172228_174176004_174176078_174178539_174178585_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_10501_165	chr10	-	175	1	Intergenic	novelGene_1200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTTCTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	119962281	119962106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_119962100_119962300
Isoform_105012_68	chr2	+	1991	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	-246	-29	-163	-3	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171635	174188534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_105013_823	chr2	+	1745	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	0	-29	0	-3	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171881	174188534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_105018_25	chr2	+	2079	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	-334	-29	-251	-3	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171547	174188534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_10502_6	chr10	+	167	1	Intergenic	novelGene_1201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAATAAATAAATCTTTA	4575	False	NA	NA	False	NA	NA	NA	119997542	119997709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_119997500_119997700
Isoform_105028_33	chr2	+	1702	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109085.8	1789	11	83	4	0	-4	multi-exon	FALSE	non_canonical	0	0	junction_2	262.324150622851	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACGGTGTTGCTCTTT	NA	False	NA	11	True	AATAAA	-15	NA	174171881	174188533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_174172228_174176004_174176078_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_10503_34	chr10	+	175	1	Intergenic	novelGene_1202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAACCTCAAACT	7517	False	NA	NA	False	NA	NA	NA	120000484	120000659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_120000500_120000700
Isoform_105033_33	chr2	+	1700	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109084.8	1695	11	-8	3	0	-3	multi-exon	FALSE	canonical	3	59	junction_2	245.35078968693	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171881	174188534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_174172228_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_105040_858	chr2	-	1375	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	65	1	65	-1	multi-exon	FALSE	canonical	3	493	junction_4	13.5292276202302	858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGTGTACTTTATTTAC	5394	False	NA	-1	True	AGTAAA	-16	NA	174280767	174269286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
Isoform_105044_938	chr2	-	404	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	14	3	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	1326.5	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305884	174302867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174303015_174304292_174304423_174305757
Isoform_105045_40	chr2	-	426	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	-8	3	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	1326.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305906	174302867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174303015_174304292_174304423_174305757
Isoform_105048_532	chr2	-	1416	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	127	10	-20	-10	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGAGACAGAAGAGCAG	NA	False	NA	-14	True	AATAAA	-35	NA	174314747	174306869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
Isoform_10505_21	chr10	+	178	1	Intergenic	novelGene_1203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120039857	120040035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_120039900_120040000
Isoform_105050_77	chr2	-	1465	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	78	10	-69	-10	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGAGACAGAAGAGCAG	NA	False	NA	-14	True	AATAAA	-35	NA	174314796	174306869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
Isoform_105057_14	chr2	-	3477	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	-14	-2838	4	2838	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATTATGGCCTGGTG	NA	False	NA	NA	False	AATAAA	-11	NA	174909570	174900503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
Isoform_105059_3	chr2	-	3728	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	-36	-3067	-18	3067	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGATGGACAGACAG	NA	False	NA	NA	False	AATAAA	-11	NA	174909592	174900274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
Isoform_10506_15	chr10	-	227	1	Intergenic	novelGene_1204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATCGCCATTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	120102314	120102087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120102100_120102300
Isoform_105061_5	chr2	-	1936	3	FSM	ENSMUSG00000078905.9	ENSMUST00000109066.2	564	3	-13	-1359	-13	-398	multi-exon	FALSE	canonical	3	40	junction_1	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTGTGCAAATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	174909587	174903739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174905454_174905660_174905788_174909492
Isoform_105063_53	chr2	-	4932	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-8	-3013	-8	2378	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174983813	174968907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
Isoform_105064_30	chr2	-	4986	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-61	-3014	-61	2379	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	174983866	174968906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
Isoform_105067_3	chr2	-	5091	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-37	-3143	-37	2508	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAGGATCAGACAGAA	NA	False	NA	NA	False	AATAAA	-33	NA	174983842	174968777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
Isoform_105069_3	chr2	-	1216	4	NIC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	56.1921307262463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGCTTCTTGGTCATG	NA	False	NA	-7	True	NA	NA	NA	175017668	175008050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_175008953_175013387_175013449_175013640_175013768_175017542
Isoform_105070_68	chr2	-	4488	4	FSM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	24	4	24	-4	multi-exon	FALSE	canonical	3	92	junction_1	16.3571255285137	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGCTTCTTGGTCAT	NA	False	NA	-8	True	NA	NA	NA	175017640	175008051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175012254_175013387_175013449_175013640_175013768_175017542
Isoform_105071_59	chr2	-	4443	4	NNC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	32	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.4866931898779	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGCTTCTTGGTCAT	NA	False	NA	-8	True	NA	NA	NA	175017632	175008051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_175012254_175013424_175013449_175013640_175013768_175017542
Isoform_105073_11	chr2	-	4750	6	FSM	ENSMUSG00000078903.11	ENSMUST00000109056.8	1956	6	-9	-2785	-9	-1064	multi-exon	FALSE	canonical	3	9	junction_4	88.9246872358852	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048719	175033921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175043445_175043548_175044851_175044907_175048573
Isoform_105075_6	chr2	-	497	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	-7	1364	-7	664	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	175048717	175038070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
Isoform_105076_115	chr2	-	4611	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	27	-2784	9	-1065	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	175048683	175033922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
Isoform_10508_4	chr10	-	179	1	Intergenic	novelGene_1205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAGAGAGAGACAGAGA	NA	False	NA	NA	False	NA	NA	NA	120113673	120113494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120113500_120113700
Isoform_105080_4	chr2	+	4209	5	NIC	ENSMUSG00000078887.11	novel	599	6	NA	NA	-1	2395	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	79.6649232724164	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGTGATGTGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	175661077	175675436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349_175670411_175671567
Isoform_105082_9	chr2	+	1432	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	19	-6	-7	6	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTGCTCTGTTCAATG	NA	False	NA	NA	False	NA	NA	NA	175661030	175671455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
Isoform_105085_10	chr2	-	1308	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	4	-347	4	347	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTTCCCATTTCATAT	NA	False	NA	NA	False	NA	NA	NA	175048688	175038387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
Isoform_105086_5	chr2	-	1453	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	21	-509	-2	509	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	175048671	175038225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
Isoform_105089_4	chr2	+	4399	6	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-589220	2786	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.887097490933	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174846550	175448439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_174846640_175435718_175435774_175442797_175442925_175443129_175443191_175444347_175447092_175447116
Isoform_105090_13	chr2	-	4453	5	FSM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	-53	2	-53	-2	multi-exon	FALSE	canonical	2	4	junction_1	105.8828952192	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175180043	175163749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175167842_175168998_175169060_175169264_175169392_175176415_175176471_175179925
Isoform_105093_21	chr2	-	4433	5	FSM	ENSMUSG00000078880.11	ENSMUST00000108990.9	1628	5	-18	-2787	7	2787	multi-exon	FALSE	canonical	2	5	junction_1	103.562481140614	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	176328129	176311847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_176315941_176317097_176317159_176317363_176317491_176324514_176324570_176328032
Isoform_105094_6	chr2	+	6517	4	FSM	ENSMUSG00000095199.9	ENSMUST00000178443.2	1458	4	-26	-5033	4	2993	multi-exon	FALSE	canonical	3	10	junction_3	15.195028426722	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	176212822	176228571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176212909_176220781_176220909_176221114_176221176_176222328
Isoform_105096_6	chr2	+	1205	3	FSM	ENSMUSG00000089951.9	ENSMUST00000127687.8	1127	3	-23	-55	-23	55	multi-exon	FALSE	canonical	3	22	junction_2	45	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTATAAATGTGAGCCAG	NA	False	NA	NA	False	NA	NA	NA	176115430	176124934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176115528_176123621_176123749_176123953
Isoform_105098_5	chr2	-	6517	4	FSM	ENSMUSG00000089756.3	ENSMUST00000108949.3	2939	4	-26	-3552	23	3552	multi-exon	FALSE	canonical	3	12	junction_1	13.5728487143349	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	175722870	175707121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175713362_175714514_175714576_175714781_175714909_175722781
Isoform_105099_52	chr2	+	4684	5	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	-6	2786	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	44.7178655572915	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	176692742	176707366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022
Isoform_10510_3	chr10	-	172	1	Intergenic	novelGene_1206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTAAAAAAAAAAAGAAAACA	3494	False	NA	NA	False	NA	NA	NA	120172276	120172104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120172100_120172300
Isoform_105100_42	chr2	-	4676	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3595	2786	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	46.0027173110459	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	175895213	175880597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175891615_175891671_175895124
Isoform_105102_6	chr2	-	1382	5	Fusion	ENSMUSG00000078897.11_ENSMUSG00000095648.8	novel	195	3	NA	NA	-3585	51	multi-exon	FALSE	non_canonical	0	0	junction_1	57.3781317228088	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTATAAATGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	175895203	175265634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_-_175265747_175885148_175886158_175886363_175886491_175891615_175891671_175895124
Isoform_105105_16	chr2	-	4436	5	NIC	ENSMUSG00000078881.11	novel	1497	4	NA	NA	3	2786	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	106.190865897214	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176178563	176162284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_176166377_176167533_176167595_176167799_176167927_176174950_176175006_176178462
Isoform_105107_5	chr2	-	3847	5	FSM	ENSMUSG00000074527.12	ENSMUST00000099007.3	3823	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	18	junction_3	30.886890422961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	NA	False	NA	NA	False	AATAAA	-25	NA	176619626	176605842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619484
Isoform_105108_10	chr2	-	3791	5	FSM	ENSMUSG00000074527.12	ENSMUST00000099007.3	3823	5	32	0	17	0	multi-exon	FALSE	canonical	3	18	junction_3	30.886890422961	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	NA	False	NA	NA	False	AATAAA	-25	NA	176619570	176605842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619484
Isoform_105109_3	chr2	+	3067	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	0	756	0	-756	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGACAGTTGGAGTTT	3035	False	NA	NA	False	NA	NA	NA	175968361	175981365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
Isoform_105110_14	chr2	-	3797	5	NNC	ENSMUSG00000074527.12	novel	3823	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	34.8093019177346	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	NA	False	NA	NA	False	AATAAA	-25	NA	176619604	176605842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619512
Isoform_105111_5	chr2	+	3062	5	NNC	ENSMUSG00000078894.10	novel	3823	5	NA	NA	-23	-756	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	28.0846933399672	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGACAGTTGGAGTTT	3012	False	NA	NA	False	NA	NA	NA	175968338	175981365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_175968452_175971917_175971973_175977111_175977239_175977443_175977505_175978659
Isoform_105113_21	chr2	-	4446	5	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-29	3170	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	176898243	176881979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
Isoform_105114_22	chr2	-	4424	5	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-7	3170	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	176898221	176881979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
Isoform_105115_3	chr2	-	4529	5	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-4	3278	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTAATTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	176898218	176881871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
Isoform_105118_10	chr2	-	4416	4	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-54	3170	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	147.159777113177	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	176898268	176881979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176898132
Isoform_105120_6	chr2	-	1218	4	FSM	ENSMUSG00000078870.10	ENSMUST00000108964.2	912	4	-30	-276	-30	276	multi-exon	FALSE	canonical	3	79	junction_3	114.822568435923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGAGTTCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	176898244	176886365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_176887290_176887494_176887622_176894619_176894675_176898132
Isoform_105125_5	chr2	-	1294	5	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	8	-2240	multi-exon	FALSE	canonical	1	4	junction_2	140.284309528899	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGAGTTCTTCCTT	NA	False	NA	-5	True	NA	NA	NA	177090104	176919505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_-_176920428_177081219_177081347_177085086_177085189_177086489_177086545_177090016
Isoform_105126_3	chr2	-	1334	5	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-44	-2253	multi-exon	FALSE	canonical	1	4	junction_2	140.284309528899	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCAGTGTGCAAAGACTT	NA	False	NA	-18	True	NA	NA	NA	177090157	176919518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_-_176920428_177081219_177081347_177085086_177085189_177086489_177086545_177090016
Isoform_105127_5	chr2	-	1240	5	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	1077	4	NA	NA	-46	30893	multi-exon	TRUE	non_canonical	0	0	junction_1	141.480564036195	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCAAACACTGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	177090159	176886372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_-_176886383_176919522_176920428_177081219_177081347_177086489_177086545_177090016
Isoform_105128_17	chr2	-	265	3	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-14	-981	combination_of_known_splicesites	FALSE	canonical	3	155	junction_2	266.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	2323	False	NA	NA	False	NA	NA	NA	177270017	177261977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177262087_177263226_177263288_177269922
Isoform_105129_7	chr2	-	2087	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5311	977	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACCATGTCATGATGT	NA	False	NA	NA	False	ATTAAA	-23	NA	176964140	176955469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_176957402_176958542_176958604_176964046
Isoform_105130_8	chr2	-	1952	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5316	837	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAGCATTTGCATGCTC	NA	False	NA	NA	False	NA	NA	NA	176964145	176955609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_176957402_176958542_176958604_176964046
Isoform_105131_5	chr2	-	5715	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5306	4610	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTCTCATATCTGTGT	NA	False	NA	NA	False	NA	NA	NA	176964135	176951836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_176957402_176958542_176958604_176964046
Isoform_105133_11	chr2	-	4683	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5551	2865	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	17.8465682975747	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177021651	177003447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_177007703_177008856_177008918_177009124_177009252_177017944_177018063_177021529
Isoform_105135_16	chr2	-	500	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177090127	177079693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
Isoform_105137_14	chr2	-	4055	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	7	2800	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177090105	177076116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
Isoform_105138_13	chr2	-	4101	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-38	2800	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177090151	177076116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
Isoform_105140_4	chr2	-	1500	5	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-20	27	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	110.628601636286	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATAATCAATGTAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	177090133	177079850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
Isoform_105144_19	chr2	-	458	4	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3078	-973	combination_of_known_junctions	FALSE	canonical	3	688	junction_1	232.759293882949	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	5426	False	NA	NA	False	NA	NA	NA	177266914	177261969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761
Isoform_105145_6	chr2	-	526	4	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3015	-968	combination_of_known_junctions	FALSE	canonical	3	688	junction_1	232.759293882949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACCAATGTGGTAAAGCT	5363	False	NA	NA	False	NA	NA	NA	177266977	177261964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761
Isoform_105146_16	chr2	-	3167	4	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3079	1737	combination_of_known_junctions	FALSE	canonical	3	688	junction_1	232.759293882949	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	5427	False	NA	NA	False	NA	NA	NA	177266913	177259259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761
Isoform_105149_34	chr2	-	445	5	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3	novel	1050	3	NA	NA	-92	-845	multi-exon	FALSE	canonical	0	0	junction_3	219.014268941546	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCATGACTGTAACCAA	NA	False	NA	-40	True	NA	NA	NA	177016192	176957291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_-_176957402_176958542_176958604_176958795_176958923_177012912_177012965_177016097
Isoform_105150_20	chr2	-	3199	5	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-49	1736	combination_of_known_junctions	FALSE	canonical	3	253	junction_4	344.203700590217	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	2288	False	NA	NA	False	NA	NA	NA	177270052	177259260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177269922
Isoform_105152_101	chr2	-	392	4	FSM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-25	981	-14	-981	multi-exon	FALSE	canonical	3	688	junction_1	226.200992236747	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	2323	False	NA	NA	False	NA	NA	NA	177270017	177261977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177262087_177263226_177263288_177263479_177263607_177269922
Isoform_105157_16	chr2	-	1679	5	Fusion	ENSMUSG00000078867.10_ENSMUSG00000078865.9	novel	531	4	NA	NA	3079	121386	multi-exon	TRUE	non_canonical	0	0	junction_1	524.596035059359	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATATTATGTTAATATTA	5427	False	NA	-82	True	NA	NA	NA	177266913	176957530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_-_176957740_177080143_177080210_177262162_177263288_177263479_177263607_177266761
Isoform_105158_10	chr2	-	1443	3	ISM	ENSMUSG00000078865.9	ENSMUST00000108943.2	531	4	3090	-896	3079	896	3prime_fragment	FALSE	canonical	3	782	junction_2	220	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAAGATTTCACGTGT	5427	False	NA	NA	False	NA	NA	NA	177266913	177262123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_177263288_177263479_177263607_177266761
Isoform_105162_7	chr2	-	1243	3	ISM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-52	1297	-41	726	5prime_fragment	FALSE	canonical	3	827	junction_2	197.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	2296	False	NA	NA	False	NA	NA	NA	177270044	177262293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_177263288_177263479_177263607_177269922
Isoform_105166_165	chr2	-	4433	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-60	-2797	-42	2797	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	-7	True	NA	NA	NA	177482171	177470786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
Isoform_105167_565	chr2	-	4379	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-5	-2798	-5	2798	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177482116	177470785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
Isoform_105175_22	chr2	-	4514	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-5	-2933	-5	2933	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGATCAGACAGAAACAT	NA	False	NA	NA	False	AATAAA	-38	NA	177482116	177470650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
Isoform_105180_63	chr2	-	1055	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	13	-758	-5	758	multi-exon	FALSE	canonical	3	312	junction_1	213.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTGCATTTGTTC	NA	False	NA	-6	True	NA	NA	NA	177482116	177475263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177476105_177476312_177476440_177482029
Isoform_105182_34	chr2	-	1108	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-39	-759	-39	759	multi-exon	FALSE	canonical	3	312	junction_1	213.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTGCATTTGTTCA	NA	False	NA	-5	True	NA	NA	NA	177482168	177475262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177476105_177476312_177476440_177482029
Isoform_105184_26	chr2	-	1309	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	13	-1012	-5	1012	multi-exon	FALSE	canonical	3	312	junction_1	213.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAACATTAGATTGCTCT	NA	False	NA	NA	False	NA	NA	NA	177482116	177475009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177476105_177476312_177476440_177482029
Isoform_105185_14	chr2	-	5567	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-21	-5236	-21	2798	multi-exon	FALSE	canonical	3	312	junction_1	213.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177482150	177470785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177476105_177476312_177476440_177482029
Isoform_105197_24	chr2	-	5533	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	13	-5236	-5	2798	multi-exon	FALSE	canonical	3	312	junction_1	213.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177482116	177470785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177476105_177476312_177476440_177482029
Isoform_105198_18	chr2	-	4081	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-24	-3747	-24	1309	multi-exon	FALSE	canonical	3	312	junction_1	213.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	-6	True	NA	NA	NA	177482153	177472274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177476105_177476312_177476440_177482029
Isoform_105201_4	chr2	-	810	3	NIC	ENSMUSG00000074529.11	novel	561	3	NA	NA	-48	258	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	4	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGTAACTCAAAGTC	NA	False	NA	NA	False	AATAAA	-24	NA	177567454	177544874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177545521_177563227_177563289_177567351
Isoform_105203_3	chr2	-	758	2	NIC	ENSMUSG00000074529.11	novel	561	3	NA	NA	-56	259	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTAACTCAAAGTCA	NA	False	NA	NA	False	AATAAA	-25	NA	177567462	177544873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177545521_177567351
Isoform_105205_81	chr2	-	4664	5	FSM	ENSMUSG00000078862.11	ENSMUST00000108930.9	1807	5	-52	-2805	-52	2805	multi-exon	FALSE	canonical	3	25	junction_3	8.13557004763649	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	177599142	177584524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000
Isoform_105208_3	chr2	-	4798	5	FSM	ENSMUSG00000078862.11	ENSMUST00000108930.9	1807	5	-54	-2937	-54	2937	multi-exon	FALSE	canonical	3	25	junction_3	8.13557004763649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGATCAGACAGAAACATT	NA	False	NA	NA	False	AATAAA	-36	NA	177599144	177584392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000
Isoform_10521_8	chr10	+	185	1	Intergenic	novelGene_741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTATAAGGA	NA	False	NA	NA	False	NA	NA	NA	15153953	15154138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_15154000_15154100
Isoform_105210_3	chr2	-	1392	4	FSM	ENSMUSG00000078862.11	ENSMUST00000108928.2	767	4	-73	-552	-15	552	multi-exon	FALSE	canonical	3	25	junction_2	8.5764535535124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTAGATTGCTCTGTTCA	NA	False	NA	NA	False	NA	NA	NA	177599105	177588918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177590024_177590229_177590357_177595474_177595530_177599000
Isoform_105212_8	chr2	-	3770	4	FSM	ENSMUSG00000078861.9	ENSMUST00000108924.9	962	4	-74	-2734	-23	2734	multi-exon	FALSE	canonical	3	15	junction_1	38.724095283887	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCTTCATGGTCATAAT	NA	False	NA	-2	True	NA	NA	NA	177720292	177706753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177710194_177711347_177711409_177711615_177711743_177720150
Isoform_105213_29	chr2	-	1395	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-23	0	-23	0	multi-exon	FALSE	canonical	3	51	junction_1	29	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATTTTAAAAGAATTCA	NA	False	NA	-14	True	NA	NA	NA	177720292	177710282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177711409_177711615_177711743_177720150
Isoform_105215_3	chr2	-	1448	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-23	-53	-23	39	multi-exon	FALSE	canonical	3	51	junction_1	29	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAAGATTTCATATGTG	NA	False	NA	39	True	NA	NA	NA	177720292	177710229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177711409_177711615_177711743_177720150
Isoform_105217_3	chr2	-	1594	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-23	-199	-23	185	multi-exon	FALSE	canonical	3	51	junction_1	29	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	177720292	177710083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_177711409_177711615_177711743_177720150
Isoform_105219_10	chr2	-	4444	15	FSM	ENSMUSG00000039117.17	ENSMUST00000041618.13	4416	15	-28	0	-28	0	multi-exon	TRUE	canonical	3	23	junction_8	22.5641941390083	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	0	True	ATTAAA	-17	NA	179618467	179553944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
Isoform_105220_19	chr2	-	4393	16	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-53	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	30.2364019023428	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	-1	True	ATTAAA	-16	NA	179618492	179553945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618162
Isoform_105225_45	chr2	-	4360	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-56	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	27.0541843138707	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	-1	True	ATTAAA	-16	NA	179618495	179553945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618162
Isoform_105226_25	chr2	-	4118	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	24.7328840929552	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	-1	True	ATTAAA	-16	NA	179618467	179553945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618376
Isoform_105237_2339	chr2	-	913	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	5	-4	5	4	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	2339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGAGAACCTGTCGTCA	NA	False	NA	-8	True	AATAAA	-21	NA	179684221	179678162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
Isoform_105238_744	chr2	-	931	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-18	1	-18	-1	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGATGAGAACCTGT	NA	False	NA	-13	True	AATAAA	-16	NA	179684244	179678167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
Isoform_10524_11	chr10	-	179	1	Intergenic	novelGene_1208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120323150	120322971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120323000_120323200
Isoform_105244_10	chr2	-	3683	2	FSM	ENSMUSG00000039059.12	ENSMUST00000166392.2	1040	2	-1136	-1507	17	-12	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGCTGACTTTTGGG	NA	False	NA	NA	False	AATAAA	-12	NA	179746264	179741269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_179743210_179744521
Isoform_105245_6	chr2	-	2714	3	FSM	ENSMUSG00000039059.12	ENSMUST00000056480.10	2706	3	-11	3	-11	-3	multi-exon	FALSE	canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGGGGACTTTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	179746292	179741260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_179743210_179744521_179744689_179745694
Isoform_105247_4	chr2	-	834	4	ISM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	48354	1	82	-1	intron_retention	FALSE	canonical	3	300	junction_2	22.7596133534821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179819298	179818166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066
Isoform_10525_5	chr10	-	176	1	Intergenic	novelGene_1209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	120338623	120338447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120338400_120338600
Isoform_10526_40	chr10	-	169	1	Intergenic	novelGene_1210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	120345696	120345527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120345500_120345700
Isoform_10527_11	chr10	-	175	1	Intergenic	novelGene_1211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	120348691	120348516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120348500_120348700
Isoform_10528_27	chr7	+	177	1	Intergenic	novelGene_10447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	2407	False	NA	NA	False	NA	NA	NA	140859829	140860006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140859800_140860000
Isoform_105294_22	chr2	-	11388	79	FSM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	0	0	0	0	multi-exon	FALSE	canonical	2	61	junction_68	85.5106215839985	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867652	179818165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
Isoform_105295_7	chr2	-	11445	79	FSM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	-55	-2	-55	2	multi-exon	TRUE	canonical	2	61	junction_68	85.5106215839985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGTGTTGATTTATAAA	NA	False	NA	-2	True	ATTAAA	-16	NA	179867707	179818163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
Isoform_105296_3	chr2	-	2516	14	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-501	0	intron_retention	FALSE	canonical	3	256	junction_11	29.6426447965181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179821937	179818165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821752_179821866
Isoform_105297_3	chr2	-	3434	20	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-2004	-1	intron_retention	FALSE	canonical	3	206	junction_18	45.5892172701171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179823440	179818166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364
Isoform_105298_228	chr2	-	2944	10	FSM	ENSMUSG00000038990.15	ENSMUST00000108891.2	2975	10	32	-1	-1	1	multi-exon	FALSE	canonical	0	0	junction_5	39.9001841018062	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915257	179900331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
Isoform_10530_3	chr10	-	2749	2	NNC	ENSMUSG00000112716.2	novel	1514	2	NA	NA	-1720	-1845	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3442	False	NA	NA	False	NA	NA	NA	120473541	120470772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_120470997_120471016
Isoform_105303_19	chr2	-	2901	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	51.4823999052103	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCCTTGCTTGTCTCCT	NA	False	NA	-2	True	AGTAAA	-17	NA	179915288	179900333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179914892
Isoform_105305_7	chr2	-	2866	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	15	junction_5	37.5091655465701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915288	179900331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179904870_179904949_179906006_179906100_179906195_179906268_179914892
Isoform_105307_5	chr2	-	4234	8	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-4	1	intron_retention	FALSE	canonical	3	108	junction_6	11.9249352884053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915260	179900331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179904949_179906006_179906100_179906195_179906268_179914892
Isoform_105308_9	chr2	-	3741	8	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	108	junction_6	11.3999641961486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCCTTGCTTGTCTCCT	NA	False	NA	-2	True	AGTAAA	-17	NA	179915286	179900333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
Isoform_105309_6	chr2	-	4567	7	FSM	ENSMUSG00000038990.15	ENSMUST00000136706.8	4561	7	-2	-4	-2	1	multi-exon	FALSE	canonical	3	108	junction_5	11.9826263120125	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915258	179900331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904949_179906006_179906100_179906195_179906268_179914892
Isoform_105310_50	chr2	-	2267	6	FSM	ENSMUSG00000038932.14	ENSMUST00000037877.11	2225	6	-39	-3	-39	3	multi-exon	FALSE	canonical	3	29	junction_3	24.9591666527551	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGTGAGTCGCTTTATT	5330	False	NA	NA	False	AATAAA	-22	NA	180284540	180263745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180264508_180277046_180277189_180280196_180280441_180282093_180282257_180282673_180282858_180283768
Isoform_105312_60	chr2	-	2261	6	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	-35	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	22.1666416039959	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTCCCAGTGAGTCGCT	5334	False	NA	NA	False	AATAAA	-17	NA	180284536	180263750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_180264508_180277046_180277189_180280196_180280444_180282093_180282257_180282673_180282858_180283768
Isoform_105314_5	chr2	-	2088	5	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	37.9242666376029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTCCCAGTGAGTCGCT	5362	False	NA	NA	False	AATAAA	-17	NA	180284508	180263750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_180264508_180280196_180280441_180282093_180282257_180282673_180282858_180283768
Isoform_105318_46	chr2	-	8471	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCTCTCTTCACTCA	NA	False	NA	-19	True	AATAAA	-14	NA	180351840	180299756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
Isoform_10532_3	chr10	-	228	1	Intergenic	novelGene_1213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGATGTTTCAAGGC	NA	False	NA	NA	False	NA	NA	NA	120594353	120594125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120594100_120594400
Isoform_105325_6	chr2	-	4667	6	FSM	ENSMUSG00000038914.16	ENSMUST00000130986.8	4898	6	243	-12	-115	-3	multi-exon	FALSE	canonical	3	16	junction_5	68.2864554651945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTTGTATCCTTCTG	NA	False	NA	-10	True	TTTAAA	-28	NA	180343900	180322853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
Isoform_105326_10	chr2	-	4596	6	FSM	ENSMUSG00000038914.16	ENSMUST00000130986.8	4898	6	316	-14	-42	-1	multi-exon	FALSE	canonical	3	16	junction_5	68.2864554651945	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTATCCTTCTGTG	NA	False	NA	-8	True	TTTAAA	-30	NA	180343827	180322851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
Isoform_105327_147	chr2	-	4650	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-37	0	-37	0	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTATCCTTCTGTGT	NA	False	NA	-7	True	TTTAAA	-31	NA	180351829	180322850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
Isoform_105329_16	chr2	-	2606	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-61	2068	-61	1898	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACTGAGTTTGGAGCCA	NA	False	NA	1	True	AGTAAA	-20	NA	180351853	180324918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
Isoform_105330_4	chr2	-	4738	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-126	1	-126	-1	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTATCCTTCTGTG	NA	False	NA	-8	True	TTTAAA	-30	NA	180351918	180322851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
Isoform_105332_4	chr2	-	3602	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-60	1071	-60	-1056	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTAGTCATATCCCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	180351852	180323921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
Isoform_105333_10	chr2	-	4832	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-37	-182	-37	182	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACACTGGTGTTTGAAT	NA	False	NA	NA	False	ACTAAA	-18	NA	180351829	180322668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
Isoform_10534_704	chr10	+	176	1	Intergenic	novelGene_1214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	704	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120658244	120658420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_120658200_120658400
Isoform_10535_9	chr10	-	169	1	Intergenic	novelGene_1215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	120692615	120692446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120692400_120692600
Isoform_105355_1129	chr2	-	3188	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	-5	1	-5	-1	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTTCTTGTTTT	NA	False	NA	-3	True	NA	NA	NA	180562747	180546170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
Isoform_105357_50	chr2	-	3241	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	-58	1	-58	-1	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTTCTTGTTTT	NA	False	NA	-3	True	NA	NA	NA	180562800	180546170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
Isoform_10536_80	chr10	-	177	1	Intergenic	novelGene_1216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9882	False	NA	NA	False	NA	NA	NA	120772174	120771997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120772000_120772200
Isoform_105363_71	chr2	-	932	7	FSM	ENSMUSG00000027574.16	ENSMUST00000103053.10	950	7	15	3	10	-3	multi-exon	FALSE	canonical	3	96	junction_2	10.8576649832682	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACAATTCGCATCCCT	NA	False	NA	NA	False	NA	NA	NA	180596477	180576567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180576823_180577735_180577821_180578943_180579005_180584822_180585021_180585533_180585615_180585869_180586008_180596363
Isoform_105364_3	chr2	-	4540	6	FSM	ENSMUSG00000027577.15	ENSMUST00000067120.14	4565	6	25	0	25	0	multi-exon	FALSE	canonical	0	0	junction_1	2.1540659228538	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTGTGGCCCTGTCTT	1561	False	NA	1	True	AATAAA	-24	NA	180681073	180664103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180666673_180669990_180671366_180675712_180675823_180675901_180675947_180679211_180679364_180680784
Isoform_105365_3	chr2	-	3271	15	FSM	ENSMUSG00000016346.18	ENSMUST00000197015.5	8031	15	-151	4911	-17	2	multi-exon	FALSE	canonical	1	2	junction_2	4.77877962390792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTGTGGTTGGGTA	NA	False	NA	NA	False	AGTAAA	-17	NA	180777071	180722289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180723569_180724125_180724250_180728761_180728894_180729367_180729477_180730139_180730364_180738742_180738773_180742342_180742412_180746679_180746775_180750814_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
Isoform_105366_3	chr2	-	1418	8	ISM	ENSMUSG00000016346.18	ENSMUST00000139458.8	1816	11	-101	8307	-17	3671	5prime_fragment	FALSE	canonical	2	6	junction_1	2.97609523657138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGATTCTGTGTGGTTT	NA	False	NA	NA	False	TTTAAA	-45	NA	180777071	180746565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_180746775_180750814_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
Isoform_105368_3	chr2	-	2938	7	FSM	ENSMUSG00000016346.18	ENSMUST00000123336.8	1686	7	-101	-1151	-17	1151	multi-exon	FALSE	canonical	3	10	junction_1	1.82574185835055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCTAAAACAAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	180777071	180749085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
Isoform_105369_4	chr2	-	4075	10	NIC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	18	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	25.1827885569921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCGTGTGTTTGTCTCTT	6213	False	NA	-8	True	AATAAA	-12	NA	180929791	180893245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906897_180907607_180907706_180919741_180919915_180929676
Isoform_10537_10	chr10	+	154	1	Intergenic	novelGene_1217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAATAAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	120804071	120804225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_120804100_120804200
Isoform_105371_149	chr2	-	4113	10	FSM	ENSMUSG00000038705.14	ENSMUST00000049032.13	4121	10	5	3	1	-3	multi-exon	FALSE	canonical	3	53	junction_5	10.3171916936948	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGTGTGTTTGTCTCTTG	6181	False	NA	-7	True	AATAAA	-13	NA	180929823	180893244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180929676
Isoform_105373_115	chr2	-	924	5	FSM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	213	-1	213	1	multi-exon	FALSE	canonical	3	148	junction_1	19.0312243431683	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTGGCTTTTCATT	NA	False	NA	-5	True	AATAAA	-17	NA	180956080	180948250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955986
Isoform_105376_10	chr2	-	2661	5	FSM	ENSMUSG00000038671.16	ENSMUST00000152580.8	1822	5	-16	-823	1	-607	multi-exon	FALSE	canonical	3	258	junction_2	29.3715423496962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTAGATGGTGGTTC	6130	False	NA	-8	True	AATAAA	-25	NA	181007143	181000284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806
Isoform_105378_4	chr2	-	2007	7	ISM	ENSMUSG00000038671.16	ENSMUST00000108808.8	1133	8	230	-603	146	603	3prime_fragment	FALSE	canonical	3	258	junction_2	24.0537592349581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAATCAGTTAGATGGT	6359	False	NA	-13	True	AATAAA	-20	NA	181006914	181000289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397
Isoform_105379_20	chr2	-	910	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	90.1022095359781	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGTGTAGGTATTCAG	6117	False	NA	NA	False	NA	NA	NA	181007156	181001108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006492_181007011
Isoform_10538_4	chr10	-	178	1	Intergenic	novelGene_1218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAATCAAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	120861259	120861081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120861100_120861300
Isoform_105381_130	chr2	-	1735	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	54	658	1	-606	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTAGATGGTGGTTCC	6130	False	NA	-7	True	AATAAA	-26	NA	181007143	181000283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
Isoform_105382_10	chr2	-	2412	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	41	-6	-2	2	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGCCAGTCACAAGGAAA	6117	False	NA	36	True	AATAAA	-20	NA	181007156	180999619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
Isoform_105383_136	chr2	-	895	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	72	1480	2	2	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAGGTATTCAGAGA	6148	False	NA	NA	False	NA	NA	NA	181007125	181001105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
Isoform_105388_4	chr2	-	2473	6	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	-7	-607	intron_retention	FALSE	canonical	3	258	junction_2	26.2937254872717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTAGATGGTGGTTC	6112	False	NA	-8	True	AATAAA	-25	NA	181007161	181000284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181006192_181006397
Isoform_105394_22	chr2	-	5313	5	FSM	ENSMUSG00000027583.14	ENSMUST00000029106.13	5309	5	-7	3	-7	-3	multi-exon	FALSE	canonical	3	8	junction_1	10.688779163216	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGATGCCTCCTGTGTGG	8531	False	NA	NA	False	AATAAA	-20	NA	181101226	181029557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181033262_181037242_181037419_181053488_181053774_181065211_181066182_181101048
Isoform_105396_33	chr2	-	2574	3	FSM	ENSMUSG00000027583.14	ENSMUST00000087409.10	2577	3	0	3	0	-3	multi-exon	FALSE	canonical	3	29	junction_1	2	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATGTCTGCTCTCTTT	8538	False	NA	-5	True	AATAAA	-14	NA	181101219	181052340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181053774_181065211_181066182_181101048
Isoform_105397_24	chr2	-	2624	3	FSM	ENSMUSG00000027583.14	ENSMUST00000087409.10	2577	3	-51	4	-51	-4	multi-exon	FALSE	canonical	3	29	junction_1	2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGATGTCTGCTCTCTT	8487	False	NA	-6	True	AATAAA	-13	NA	181101270	181052341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181053774_181065211_181066182_181101048
Isoform_105398_87	chr2	-	1815	15	FSM	ENSMUSG00000089917.8	ENSMUST00000057816.15	1849	15	28	6	-2	-3	multi-exon	FALSE	canonical	3	84	junction_14	14.4936650482413	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATCGTGTGGCAGAAT	4575	False	NA	-5	True	AATAAA	-17	NA	181223773	181210947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214262_181214280_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
Isoform_105399_44	chr2	-	1837	15	FSM	ENSMUSG00000089917.8	ENSMUST00000057816.15	1849	15	6	6	6	-3	multi-exon	FALSE	canonical	3	84	junction_14	14.4936650482413	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATCGTGTGGCAGAAT	4553	False	NA	-5	True	AATAAA	-17	NA	181223795	181210947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214262_181214280_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
Isoform_1054_450	SIRV6003	+	5999	1	FSM	SIRV6003A	SIRV6003	6000	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	5999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6003_+_0_6000
Isoform_10540_35	chr10	-	182	1	Intergenic	novelGene_1219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATATTATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	121170519	121170337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_121170300_121170500
Isoform_105401_6	chr2	-	1923	14	NIC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	-13	0	intron_retention	FALSE	canonical	3	84	junction_13	13.7819022055146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAGAAAATGATCGTGT	4564	False	NA	-13	True	AATAAA	-40	NA	181223784	181210955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214262_181214280_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
Isoform_105402_8	chr2	-	1905	13	NIC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	17	junction_6	29.3976567471325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATCGTGTGGCAGAAT	4573	False	NA	-5	True	AATAAA	-17	NA	181223775	181210947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
Isoform_105404_3	chr2	-	5804	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-9	-2	intron_retention	FALSE	canonical	2	4	junction_9	14.2229860905976	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGATTTTGTGTGGCTGA	7474	False	NA	-5	True	AATAAA	-22	NA	181234560	181223899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230417_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
Isoform_105406_6	chr2	-	5766	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	14	junction_15	12.4357906418888	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGATTTTGTGTGGCT	7480	False	NA	-7	True	AATAAA	-20	NA	181234554	181223901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
Isoform_105407_3	chr2	-	5547	16	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	21	-4	intron_retention	TRUE	canonical	3	4	junction_15	13.7365691980688	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGATTTTGTGTGGCT	7459	False	NA	-7	True	AATAAA	-20	NA	181234575	181223901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234446
Isoform_105409_12	chr2	-	2141	5	FSM	ENSMUSG00000038605.12	ENSMUST00000183836.2	2131	5	-9	-1	5	1	multi-exon	FALSE	canonical	3	8	junction_4	19.6850196850295	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCAGTGTTGGGTCT	1034	False	NA	-4	True	AATAAA	-12	NA	181241000	181237012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239387_181240724
Isoform_105411_71	chr2	-	2138	5	FSM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	24	2	10	1	multi-exon	FALSE	canonical	3	33	junction_4	9.60143218483576	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCAGTGTTGGGTCT	1053	False	NA	-4	True	AATAAA	-12	NA	181240981	181237012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239403_181240724
Isoform_105412_5	chr2	-	2225	5	FSM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	-63	2	-63	1	multi-exon	FALSE	canonical	3	33	junction_4	9.60143218483576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCAGTGTTGGGTCT	8	True	NA	-4	True	AATAAA	-12	NA	181241068	181237012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239403_181240724
Isoform_105413_5	chr2	-	895	6	NIC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	48.4090900554844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCTTTCAAGTTGCT	NA	False	NA	-12	True	AATAAA	-17	NA	181335728	181330211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_181330512_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
Isoform_105414_5	chr2	-	1949	6	FSM	ENSMUSG00000002458.14	ENSMUST00000108776.8	1216	6	-90	-643	7	-1	multi-exon	FALSE	canonical	2	7	junction_5	50.8660987299006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGTTCTTTCAAGT	NA	False	NA	-16	True	AATAAA	-13	NA	181335693	181330215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335155
Isoform_105416_93	chr2	-	1462	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	47	2	0	-2	multi-exon	FALSE	canonical	3	85	junction_5	20.8461027532726	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTTTGTTCTTTCAAG	NA	False	NA	-17	True	AATAAA	-12	NA	181335723	181330216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
Isoform_105418_3	chr2	-	1645	6	NNC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	52.4427306687972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGTTCTTTCAAGT	NA	False	NA	-16	True	AATAAA	-13	NA	181335711	181330215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335477
Isoform_105419_4	chr2	-	1320	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108772.8	779	5	-27	-514	3	0	multi-exon	FALSE	canonical	3	30	junction_4	46.2729672703189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGTTATGGTCTT	NA	False	NA	0	True	AGTAAA	-13	NA	181335767	181330296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181335671
Isoform_10542_5	chr10	+	889	1	NIC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	5	-6248	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAGAAACAAGT	NA	False	NA	NA	False	NA	NA	NA	121201018	121201907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_121201000_121201900
Isoform_105420_26	chr2	-	1358	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108772.8	779	5	17	-596	0	0	multi-exon	FALSE	canonical	3	30	junction_4	46.2729672703189	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGTTCTTTCAAGTT	NA	False	NA	-15	True	AATAAA	-14	NA	181335723	181330214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181335671
Isoform_105421_3	chr2	-	1124	4	NIC	ENSMUSG00000002458.14	novel	779	5	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	59.7345982008938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTACTTTGTTCTTTCAA	NA	False	NA	-18	True	AATAAA	-11	NA	181335727	181330217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_181331089_181331494_181331570_181333025_181333148_181335671
Isoform_105423_6	chr2	-	1437	4	NIC	ENSMUSG00000002458.14	novel	1460	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	30	junction_3	52.8036194045657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTTTGTTCTTTCAAG	NA	False	NA	-17	True	AATAAA	-12	NA	181335723	181330216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_181331405_181331494_181331570_181333025_181333148_181335671
Isoform_105431_1324	chr2	-	3693	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	2	-46	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	211.688282609319	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	-2	True	AATAAA	-18	NA	94268479	94242072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
Isoform_105438_560	chr2	-	875	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1752	-8	multi-exon	FALSE	canonical	3	698	junction_1	0	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAACGGTCCGGGCTGTG	917	False	NA	-11	True	AATAAA	-9	NA	162931527	162928961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_162929768_162931458
Isoform_10544_5	chr10	+	153	1	Intergenic	novelGene_1221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGTGGGACCAG	NA	False	NA	NA	False	NA	NA	NA	121235339	121235492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_121235300_121235500
Isoform_105441_439	chr2	-	749	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1752	-8	multi-exon	FALSE	canonical	3	735	junction_1	0	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAACGGTCCGGGCTGTG	917	False	NA	-11	True	AATAAA	-9	NA	162931527	162928961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_162929642_162931458
Isoform_105442_39	chr2	-	2967	2	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAAAGTCTTACTGCAT	NA	False	NA	-5	True	AATAAA	-25	NA	130471936	130455759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130458626_130471835
Isoform_105443_77	chr2	-	3087	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	26	-12	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	92.5	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACATTGATCCACAAA	NA	False	NA	-17	True	AATAAA	-13	NA	130471921	130455771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_130458626_130470408_130470556_130471835
Isoform_105447_10	chr2	-	5670	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-234	-15186	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGTTTTATTTTGTTG	NA	False	NA	-6	True	AATAAA	-17	NA	104647339	104600325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
Isoform_105449_12	chr2	-	5437	8	NNC	ENSMUSG00000074994.7	novel	8973	12	NA	NA	-234	-15419	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTAGTGTCCCGTCTC	NA	False	NA	NA	False	ATTAAA	-15	NA	104647339	104600558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
Isoform_105450_9	chr2	-	6581	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-244	-14285	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAATCATCCTTCTAG	NA	False	NA	-8	True	AATAAA	-12	NA	104647349	104599424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
Isoform_105452_80	chr2	-	171	2	Antisense	novelGene_ENSMUSG00000043241.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	80	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTTAGAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	5995177	5991428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_5991551_5995128
Isoform_105453_35	chr2	-	3709	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-26	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.7932571498307	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	-11	True	TATAAA	-16	NA	93164876	93032104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_93033536_93033621_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
Isoform_105455_14	chr2	-	5765	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	9.53097613955882	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGTCATGACTTATTT	NA	False	NA	-1	True	AATAAA	-17	NA	125467037	125405008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_125406315_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
Isoform_105456_3	chr2	-	1326	3	Intergenic	novelGene_6047	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGGAATCTTTCTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	26530256	26527189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_26527646_26528052_26528108_26529441
Isoform_105457_34	chr2	-	742	4	Intergenic	novelGene_6046	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_3	6.37704215656966	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGAATCTTTCTTTGCT	NA	False	NA	-6	True	AATAAA	-16	NA	26530256	26527187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_26527646_26528052_26528108_26529441_26529484_26530069
Isoform_105459_24	chr2	-	2644	2	Antisense	novelGene_ENSMUSG00000081611.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGTTGTTTGTTTGTTGTT	7366	False	NA	NA	False	ATTAAA	-20	NA	77139785	77114973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_77117450_77139617
Isoform_10546_3	chr10	-	2977	1	NIC	ENSMUSG00000025795.9	novel	3522	5	NA	NA	32	-58952	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	121312220	121309243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_121309200_121312200
Isoform_105461_3	chr2	-	2765	3	Antisense	novelGene_ENSMUSG00000081611.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCGGTTGTTTGTTT	7366	False	NA	NA	False	ATTAAA	-14	NA	77139785	77114979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_77117450_77124869_77124997_77139617
Isoform_105462_4	chr2	-	3101	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	0	6269	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	69.1391511534689	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTTCTCTCGAGTTA	NA	False	NA	-1	True	NA	NA	NA	156681720	156668699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_156671325_156679742_156679834_156680337_156680457_156681454
Isoform_105464_6	chr2	-	3009	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	3	6269	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	68.0636956583072	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTTCTCTCGAGTTA	NA	False	NA	-1	True	NA	NA	NA	156681809	156668699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_156671325_156679742_156679834_156680337_156680457_156681635
Isoform_105465_7	chr2	-	2081	2	Intergenic	novelGene_6484	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTATAAGAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	118418261	118416022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_118418029_118418186
Isoform_10547_19	chr10	+	211	1	Intergenic	novelGene_1222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	121327733	121327944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_121327700_121327900
Isoform_105471_12	chr2	-	544	3	Intergenic	novelGene_6831	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	0	True	NA	NA	NA	170515750	170512871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_170513139_170515342_170515518_170515648
Isoform_105473_9	chr2	-	657	4	NNC	ENSMUSG00000078861.9	novel	1372	3	NA	NA	-29	12806	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	39.4743235815666	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCACCTGGAAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	177720298	177696681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_177697003_177711347_177711409_177711615_177711743_177720150
Isoform_105474_12	chr2	-	630	2	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGGCCAAATATGTATG	8707	False	NA	-9	True	NA	NA	NA	157439240	157437498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_157437903_157439014
Isoform_105475_12	chr2	-	1666	2	Intergenic	novelGene_6768	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTTGGTCATAGTGTC	NA	False	NA	-2	True	NA	NA	NA	166096661	166094480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166095994_166096508
Isoform_105477_3	chr2	-	2144	4	NNC	ENSMUSG00000081949.4	novel	401	4	NA	NA	-120	12269	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTACTCTTTTTTTTTA	NA	False	NA	NA	False	TATAAA	-16	NA	174951928	174933977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_174935811_174947682_174947744_174947936_174948064_174951805
Isoform_105479_3	chr2	-	1681	2	NNC	ENSMUSG00000054074.10	novel	835	2	NA	NA	-15413	-429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAGAATCAAGTCAGTGTA	NA	False	NA	NA	False	TTTAAA	-38	NA	18069275	18053383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_18055005_18069215
Isoform_10548_15	chr10	-	2006	1	Genic_Genomic	ENSMUSG00000112478.2	novel	NA	NA	NA	NA	-1166	-3553	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAAAAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	17200142	17198136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_17198100_17200100
Isoform_105480_6	chr2	-	3614	10	NNC	ENSMUSG00000026779.7	novel	1201	7	NA	NA	-48	-9378	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	46.3896540189728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTTGTCTTAAATCAG	NA	False	NA	NA	False	ATTAAA	-24	NA	23045957	23014995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_23016302_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_105482_4	chr2	-	712	4	Antisense	novelGene_ENSMUSG00000085949.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGTGTAGTCAGTTAT	NA	False	NA	NA	False	NA	NA	NA	172136515	172132002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_172132278_172134257_172134405_172135339_172135530_172136415
Isoform_105483_9	chr2	-	1448	12	NNC	ENSMUSG00000017697.4	novel	1688	12	NA	NA	13	-230	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	19.317700528764	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCACATGGTGAAT	NA	False	NA	-6	True	AATAAA	-18	NA	163592146	163568733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_163568972_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
Isoform_105484_8	chr2	-	3090	22	NNC	ENSMUSG00000037110.21	novel	3730	16	NA	NA	-12	1279	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	9.102589898328	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAAGAATACCTC	NA	False	NA	NA	False	AATAAA	-7	NA	146353958	146245475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_146245609_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
Isoform_105486_5	chr2	-	2358	2	Intergenic	novelGene_6770	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166279607	166273866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166276134_166279516
Isoform_105488_3	chr2	-	991	4	Intergenic	novelGene_6846	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTGTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	174822844	174814818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_174815407_174816149_174816238_174816642_174816808_174822694
Isoform_105491_3	chr2	-	3156	2	Intergenic	novelGene_6335	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTAGGACTTTTTCTGA	3934	False	NA	NA	False	AATAAA	-23	NA	75463884	75439316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75442388_75463799
Isoform_105492_3	chr2	-	1192	3	NNC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	0	-57513	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTACTTTGTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	122016670	122008101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_122009081_122009575_122009730_122016611
Isoform_105495_4	chr2	-	2791	3	Intergenic	novelGene_6262	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATCTGCATAAATATGG	NA	False	NA	NA	False	AATAAA	-22	NA	63378882	63355795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_63358412_63378630_63378695_63378771
Isoform_105496_3	chr2	-	2611	2	Intergenic	novelGene_6714	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTTTGTTGCGTC	3294	False	NA	NA	False	NA	NA	NA	157498038	157494216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_157496641_157497851
Isoform_105497_5	chr2	-	397	2	Intergenic	novelGene_6337	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGAGCAGTTTCTTT	3936	False	NA	NA	False	TTTAAA	-13	NA	75463882	75457500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75457815_75463799
Isoform_105502_33	chr2	+	4166	8	FSM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	-23	6	-23	-6	multi-exon	FALSE	canonical	3	29	junction_6	7.31785627135183	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATGTGTTTATTCT	863	False	NA	NA	False	AATAAA	-14	NA	3119395	3228837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
Isoform_105503_49	chr2	+	4132	8	FSM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	11	6	11	-6	multi-exon	FALSE	canonical	3	29	junction_6	7.31785627135183	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATGTGTTTATTCT	897	False	NA	NA	False	AATAAA	-14	NA	3119429	3228837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
Isoform_105504_8	chr2	+	3647	8	FSM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	-51	553	-51	1	multi-exon	TRUE	canonical	3	29	junction_6	7.31785627135183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGAGTCAGTTCTTCAA	835	False	NA	NA	False	AATAAA	-22	NA	3119367	3228290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
Isoform_105506_5	chr2	+	4037	7	FSM	ENSMUSG00000050530.15	ENSMUST00000091505.11	3449	7	-34	-554	-3	0	multi-exon	FALSE	canonical	2	5	junction_6	16.2241246981839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	883	False	NA	NA	False	AATAAA	-20	NA	3119415	3228843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3225854
Isoform_105509_229	chr2	+	4453	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	2	6	2	-6	multi-exon	FALSE	canonical	3	230	junction_10	26.4695873268632	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTGTTTTGAGTGTTTT	989	False	NA	15	True	AATAAA	-15	NA	3285250	3329908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
Isoform_105512_167	chr2	+	1813	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-33	2681	-33	-2	multi-exon	TRUE	canonical	3	230	junction_10	26.4695873268632	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAGTAGTTGTTAACA	954	False	NA	8	True	AATAAA	-17	NA	3285215	3327233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
Isoform_105519_3	chr2	+	535	4	FSM	ENSMUSG00000026644.8	ENSMUST00000115089.2	531	4	0	-4	0	4	multi-exon	FALSE	canonical	2	5	junction_2	7.54247233265651	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGTGTATGGATATTT	1038	False	NA	NA	False	AATAAA	-20	NA	3337204	3342034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_3337259_3341369_3341488_3341591_3341655_3341734
Isoform_105522_45	chr2	+	3744	14	FSM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	-18	-1257	1	1257	multi-exon	FALSE	canonical	3	20	junction_5	4.46419019339905	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGTACTTGAGTATGAT	1003	False	NA	6	True	AATAAA	-17	NA	3425168	3456386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
Isoform_105524_6	chr2	+	3667	13	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	3	1257	intron_retention	FALSE	canonical	0	0	junction_4	9.10547759440559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGTACTTGAGTATGAT	1024	False	NA	6	True	AATAAA	-17	NA	3425189	3456386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
Isoform_105526_273	chr2	+	3164	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	121	junction_1	8.49836585598797	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTTTGTCTCGTTTGT	936	False	NA	19	True	AATAAA	-25	NA	3714486	3783179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
Isoform_105531_7	chr2	+	3835	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	17	503	-2	-503	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAAGTGTTTTACCGTTG	4450	False	NA	75	True	AAAAAG	-14	NA	4564583	4616892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_105532_29	chr2	+	5757	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	46	-1448	27	-9	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAACACCCCAGTTG	4479	False	NA	NA	False	ATTAAA	-10	NA	4564612	4618843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_105533_7	chr2	+	5681	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	13	-1339	-6	-19	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGAAATCTGC	4446	False	NA	NA	False	NA	NA	NA	4564579	4618734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_105535_20	chr2	+	3775	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	20	560	1	-560	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCCTTTCAGTTTTTG	4453	False	NA	18	True	AGTAAA	-22	NA	4564586	4616835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_105537_3	chr2	+	5937	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	-134	-1448	-132	-9	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAACACCCCAGTTG	4299	False	NA	NA	False	ATTAAA	-10	NA	4564432	4618843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_105539_14	chr2	+	2579	6	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	37497	559	31077	-559	3prime_fragment	FALSE	canonical	3	51	junction_3	8.23164625090267	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCCTTTCAGTTTTTGT	4785	False	NA	19	True	AGTAAA	-23	NA	4602063	4616836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_105540_12	chr2	+	2638	6	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	37495	502	31075	-502	3prime_fragment	FALSE	canonical	3	51	junction_3	8.23164625090267	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTGTTTTACCGTTGT	4783	False	NA	76	True	AAAAAG	-15	NA	4602061	4616893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_105542_14	chr2	+	4554	6	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	37528	-1447	31108	-10	3prime_fragment	FALSE	canonical	3	51	junction_3	8.23164625090267	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAACACCCCAGTT	4816	False	NA	NA	False	ATTAAA	-9	NA	4602094	4618842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_105545_5	chr2	+	3829	9	FSM	ENSMUSG00000048186.15	ENSMUST00000184139.8	2251	9	4	-1582	1	3	multi-exon	FALSE	canonical	2	4	junction_5	3.45506874027131	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGTCTTGCTTGCTAC	4447	False	NA	7	True	AATAAA	-18	NA	4722645	4806956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4723104_4725291_4725376_4749029_4749333_4754346_4754470_4757530_4757803_4767888_4768115_4793266_4793387_4801343_4801395_4804764
Isoform_105546_264	chr2	+	3005	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	252	2062	252	358	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATACTGTTGGACTTGC	4344	False	NA	18	True	AATAAA	-27	NA	4886626	4913306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_105548_108	chr2	+	3308	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-46	2057	-46	363	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGGACTTGCTTCTA	4046	False	NA	23	True	AATAAA	-32	NA	4886328	4913311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_105550_16	chr2	+	4035	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	252	1032	252	-1032	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTAGATCTTCATTTT	4344	False	NA	9	True	AATAAA	-22	NA	4886626	4914336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_105563_38	chr2	+	2903	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	250	358	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATACTGTTGGACTTGC	4342	False	NA	18	True	AATAAA	-27	NA	4886624	4913306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_105566_13	chr2	+	3198	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	-45	358	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATACTGTTGGACTTGC	4047	False	NA	18	True	AATAAA	-27	NA	4886329	4913306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_105571_16	chr2	+	3290	9	FSM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	-6	-351	-6	351	multi-exon	FALSE	canonical	3	45	junction_1	174.928378200908	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGAAACTATACTGTTG	4767	False	NA	11	True	AATAAA	-20	NA	4887049	4913299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_105589_410	chr2	+	1444	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	-6	0	-6	0	multi-exon	FALSE	canonical	3	390	junction_4	31.960669188864	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATATTAAGTCAATTTCT	985	False	NA	9	True	AATAAA	-20	NA	4923823	4943541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
Isoform_105596_57	chr2	+	2647	4	NNC	ENSMUSG00000026676.8	novel	2670	3	NA	NA	-12	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.3571255285137	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAAAGTGAGTG	4715	False	NA	NA	False	AATAAA	-29	NA	5142574	5235676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_5143119_5146041_5146217_5233726_5234954_5234975
Isoform_105597_62	chr2	+	2695	3	FSM	ENSMUSG00000026676.8	ENSMUST00000027988.8	2670	3	-38	13	-38	-13	multi-exon	FALSE	canonical	3	30	junction_2	4	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAAAGTGAGTG	4689	False	NA	NA	False	AATAAA	-29	NA	5142548	5235676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_5143119_5146041_5146217_5233726
Isoform_105599_3	chr2	+	783	3	FSM	ENSMUSG00000025817.13	ENSMUST00000138549.8	1677	3	13	881	13	-881	multi-exon	FALSE	canonical	3	607	junction_1	40	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCTTTAAAAAAAAAAAAA	1949	False	NA	NA	False	NA	NA	NA	5850076	5861350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_5850197_5859626_5859730_5860790
Isoform_105601_7	chr2	+	1468	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	15	0	intron_retention	FALSE	canonical	3	607	junction_1	58.7319121091762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1951	False	NA	NA	False	NA	NA	NA	5850078	5873547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871043_5871219_5872899
Isoform_105602_39	chr2	+	1362	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGACTTGGGGGTTTT	1937	False	NA	NA	False	NA	NA	NA	5850064	5873548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
Isoform_105603_4	chr2	+	1587	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1711	False	NA	NA	False	NA	NA	NA	5849838	5873547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
Isoform_105604_4	chr2	+	3427	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	15	-1079	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGGGTGGTGTCAAAT	1951	False	NA	4	True	AATAAA	-11	NA	5850078	5875627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
Isoform_105609_254	chr2	+	5161	22	FSM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	6	7	6	-2	multi-exon	FALSE	canonical	3	171	junction_5	24.2975694686972	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCATGATTTGTTTT	1684	False	NA	10	True	AATAAA	-14	NA	5956285	6061507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
Isoform_105610_34	chr2	+	5229	22	FSM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	-61	6	-61	-1	multi-exon	TRUE	canonical	3	171	junction_5	24.2975694686972	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGCATGATTTGTTTTA	1617	False	NA	11	True	AATAAA	-15	NA	5956218	6061508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
Isoform_105611_58	chr2	+	5155	22	NIC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	43.3799853532905	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGATTTGTTTTAT	1689	False	NA	12	True	AATAAA	-16	NA	5956290	6061509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051711_6051877_6055148_6055291_6056319_6056441_6060243
Isoform_105612_22	chr2	+	5211	22	NIC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	43.3799853532905	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGATTTGTTTTAT	1633	False	NA	12	True	AATAAA	-16	NA	5956234	6061509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051711_6051877_6055148_6055291_6056319_6056441_6060243
Isoform_105613_7	chr2	+	5412	23	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-46	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	62.7902187466164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGATTTGTTTTATTTG	1632	False	NA	15	True	AATAAA	-19	NA	5956233	6061512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_5956365_5957238_5957433_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
Isoform_105634_15	chr2	+	7508	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	-24	0	-24	0	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4630	False	NA	10	True	ATTAAA	-20	NA	6327453	6451201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
Isoform_105635_20	chr2	+	7375	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	109	0	4	0	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4763	False	NA	10	True	ATTAAA	-20	NA	6327586	6451201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
Isoform_105637_4	chr2	+	7256	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	34.0551241267734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4799	False	NA	10	True	ATTAAA	-20	NA	6327622	6451201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
Isoform_105639_48	chr2	+	1376	5	FSM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	-10	106	-10	-106	multi-exon	FALSE	canonical	3	38	junction_2	5.40832691319598	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTTATTTTATCTTT	4815	False	NA	NA	False	AATAAA	-23	NA	10085424	10097511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096528
Isoform_10564_5	chr10	-	181	1	Intergenic	novelGene_1223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAGAGAAATC	9288	False	NA	NA	False	NA	NA	NA	121426468	121426287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_121426300_121426500
Isoform_105643_3	chr2	+	1895	6	FSM	ENSMUSG00000061186.16	ENSMUST00000114864.9	1901	6	9	-3	-3	3	multi-exon	FALSE	canonical	3	38	junction_1	9.3936148526539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAATAATGCCT	4698	False	NA	NA	False	AATATA	-12	NA	10377255	10443951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757
Isoform_105644_5	chr2	+	8015	23	FSM	ENSMUSG00000061186.16	ENSMUST00000041105.7	7874	23	-152	11	-138	1	multi-exon	TRUE	canonical	3	38	junction_1	8.61768314629387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTATGGTGGTGT	4551	False	NA	-8	True	AATAAA	-5	NA	10377108	10600053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
Isoform_105645_14	chr2	+	7863	23	FSM	ENSMUSG00000061186.16	ENSMUST00000041105.7	7874	23	11	0	11	0	multi-exon	FALSE	canonical	3	38	junction_1	8.61768314629387	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	4714	False	NA	3	True	AATAAA	-16	NA	10377271	10600064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
Isoform_105649_11	chr2	+	3617	6	NIC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	9	2	intron_retention	FALSE	canonical	3	29	junction_2	16.4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAGTTGGCCTATTCA	4813	False	NA	30	True	AATAAA	-32	NA	11783346	11795133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_11783714_11784487_11784635_11786287_11788561_11789101_11789264_11791034_11791114_11794544
Isoform_105651_13	chr2	+	4157	5	NIC	ENSMUSG00000047909.12	novel	3643	6	NA	NA	9	1	intron_retention	FALSE	canonical	3	29	junction_2	17.8097585609688	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGTTGGCCTATTC	4813	False	NA	29	True	AATAAA	-31	NA	11783346	11795132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_11783714_11784487_11784635_11786287_11789264_11791034_11791114_11794544
Isoform_105652_7	chr2	+	2353	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	-738	3	-123	2	multi-exon	FALSE	canonical	3	24	junction_3	18.7742435858871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAGTTGGCCTATTCA	4030	False	NA	30	True	AATAAA	-32	NA	11782563	11795133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
Isoform_105654_11	chr2	+	1535	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	79	4	-2	1	multi-exon	FALSE	canonical	3	24	junction_3	18.7742435858871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGTTGGCCTATTC	4847	False	NA	29	True	AATAAA	-31	NA	11783380	11795132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
Isoform_105655_6	chr2	+	3658	6	NIC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	-3	2	intron_retention	FALSE	canonical	3	30	junction_2	16.0822883943797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAGTTGGCCTATTCA	4846	False	NA	30	True	AATAAA	-32	NA	11783379	11795133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_11783714_11784487_11784709_11786287_11788561_11789101_11789264_11791034_11791114_11794544
Isoform_105657_4	chr2	+	1795	5	FSM	ENSMUSG00000026730.13	ENSMUST00000134794.8	3571	5	-66	1842	-15	-1	multi-exon	FALSE	canonical	2	8	junction_1	18.3490462967425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGTGTTTTCCACTTA	4697	False	NA	NA	False	AATAAA	-38	NA	12928836	13006424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999702_13005667
Isoform_105658_5	chr2	+	1307	4	NIC	ENSMUSG00000026730.13	novel	3571	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	21.1712593442672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTGTTTTCCACTTAT	4728	False	NA	NA	False	AATAAA	-39	NA	12928867	13006425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_12929010_12985103_12985370_12999560_12999702_13005667
Isoform_105659_67	chr2	+	1847	10	NIC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	86.9850278020786	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGTTTTGGTGTGT	-3	True	NA	7	True	AATAAA	-7	NA	13578768	13587630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_13578872_13579204_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
Isoform_10566_3	chr10	+	3286	1	Antisense	novelGene_ENSMUSG00000034667.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121446946	121450232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_121446900_121450200
Isoform_105663_470	chr2	+	1829	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	357	7	-13	-6	multi-exon	FALSE	canonical	3	229	junction_1	35.7786161694384	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGTTTTGGTGTGT	78	False	NA	7	True	AATAAA	-7	NA	13579119	13587630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
Isoform_105665_32	chr2	+	2173	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	13	7	13	-6	multi-exon	FALSE	canonical	3	229	junction_1	35.7786161694384	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGTTTTGGTGTGT	4	True	NA	7	True	AATAAA	-7	NA	13578775	13587630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
Isoform_105676_12	chr2	+	2931	15	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	78.2569029360532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATTCTGATTTTGTTT	4723	False	NA	27	True	ATTAAA	-29	NA	14078949	14152351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14138453_14138520_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
Isoform_105677_206	chr2	+	2861	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	41	2098	31	-4	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTATATTCTGATTTT	4723	False	NA	23	True	ATTAAA	-25	NA	14078949	14152347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
Isoform_105678_71	chr2	+	2896	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	4	2100	4	-6	multi-exon	TRUE	canonical	3	181	junction_8	24.7443735759998	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATTTATATTCTGATT	4686	False	NA	21	True	ATTAAA	-23	NA	14078912	14152345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
Isoform_105682_73	chr2	+	3808	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	41	1151	31	943	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTCTTAGTTACGTC	4723	False	NA	12	True	AATAAA	-12	NA	14078949	14153294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
Isoform_105685_9	chr2	+	4952	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	47	1	37	-1	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATCTTTGTTTCTTTTTT	4729	False	NA	NA	False	TATAAA	-16	NA	14078955	14154444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
Isoform_105690_6	chr2	+	6097	13	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	31	-2	intron_retention	FALSE	canonical	3	190	junction_9	22.0749984270793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATATTCTGATTTTGT	4723	False	NA	25	True	ATTAAA	-27	NA	14078949	14152349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
Isoform_105696_52	chr2	+	6944	6	FSM	ENSMUSG00000017418.15	ENSMUST00000069870.11	6981	6	35	2	-12	-2	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTAGCCTGTGTTTTCT	4693	False	NA	14	True	AATAAA	-16	NA	15060085	15087265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
Isoform_105699_3	chr2	+	6969	6	FSM	ENSMUSG00000017418.15	ENSMUST00000069870.11	6981	6	6	6	6	-2	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTAGCCTGTGTT	4664	False	NA	10	True	AATAAA	-12	NA	15060056	15087261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
Isoform_10570_7	chr10	-	156	1	Intergenic	novelGene_1224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	121532096	121531940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_121531900_121532100
Isoform_105701_10	chr2	+	6890	6	FSM	ENSMUSG00000017418.15	ENSMUST00000128682.9	1035	6	1	-5856	1	-1	multi-exon	FALSE	canonical	3	15	junction_2	39.1989795785554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGTGTAGCCTGTGTTT	4706	False	NA	11	True	AATAAA	-13	NA	15060098	15087262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_15060386_15072949_15073011_15074668_15074779_15077934_15078019_15079772_15079925_15081066
Isoform_105702_5	chr2	+	2781	14	FSM	ENSMUSG00000026748.14	ENSMUST00000114702.2	2146	14	-807	172	6	-4	multi-exon	FALSE	canonical	2	3	junction_10	16.8132801836092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACACTTTTGGTTCAAAT	105	False	NA	10	True	AATAAA	-23	NA	16361120	16756496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708189_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_105703_43	chr2	+	2756	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	37	4154	37	-4	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACACTTTTGGTTCAAAT	136	False	NA	10	True	AATAAA	-23	NA	16361151	16756496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_105706_42	chr2	+	2784	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	6	4157	6	-7	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCGACACTTTTGGTTCA	105	False	NA	7	True	AATAAA	-20	NA	16361120	16756493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_105707_7	chr2	+	6232	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	37	678	37	-678	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTATGTCCAGATAATA	136	False	NA	NA	False	AATAAA	-14	NA	16361151	16759972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_105708_3	chr2	+	6258	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	11	678	11	-678	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTATGTCCAGATAATA	110	False	NA	NA	False	AATAAA	-14	NA	16361125	16759972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_10571_3	chr10	-	183	1	Intergenic	novelGene_1225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAGGAAGAATAGCAG	8038	False	NA	NA	False	NA	NA	NA	121799065	121798882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_121798900_121799100
Isoform_105711_5	chr2	+	5072	24	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-34	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	73.2903437033231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4608	False	NA	13	True	AATAAA	-17	NA	18069412	18217200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105717_37	chr2	+	5038	23	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	2	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	47.2740384433549	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	14	True	AATAAA	-18	NA	18069396	18217201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_10572_14	chr10	+	173	1	Intergenic	novelGene_1226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGTGCACATG	NA	False	NA	NA	False	NA	NA	NA	121873377	121873550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_121873400_121873600
Isoform_105721_4	chr2	+	4941	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_12	64.8651487961345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4653	False	NA	11	True	AATAAA	-15	NA	18069457	18217198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105724_5	chr2	+	4927	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	63.2565234193442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4592	False	NA	13	True	AATAAA	-17	NA	18069396	18217200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105725_6	chr2	+	4843	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-14	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	63.2565234193442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4676	False	NA	13	True	AATAAA	-17	NA	18069480	18217200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105728_7	chr2	+	4928	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	59.0850112021047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4647	False	NA	14	True	AATAAA	-18	NA	18069451	18217201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105729_5	chr2	+	4988	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	59.0850112021047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4584	False	NA	11	True	AATAAA	-15	NA	18069388	18217198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105731_4	chr2	+	5115	24	FSM	ENSMUSG00000026743.17	ENSMUST00000114671.8	5063	24	-50	-2	-50	2	multi-exon	FALSE	canonical	3	11	junction_3	74.1776083487481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	14	True	AATAAA	-18	NA	18069396	18217201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105736_35	chr2	+	5063	23	FSM	ENSMUSG00000026743.17	ENSMUST00000114680.9	3543	23	-101	-1419	-50	1	multi-exon	FALSE	canonical	3	88	junction_1	48.8940497317777	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4592	False	NA	13	True	AATAAA	-17	NA	18069396	18217200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105739_4	chr2	+	5027	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-47	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_12	65.9975605953368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4595	False	NA	13	True	AATAAA	-17	NA	18069399	18217200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105740_4	chr2	+	4985	22	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	66.0879644687219	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4573	False	NA	12	True	AATAAA	-16	NA	18069377	18217199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105741_7	chr2	+	4966	22	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_7	65.2748592969439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4592	False	NA	12	True	AATAAA	-16	NA	18069396	18217199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_105742_8	chr2	+	913	7	FSM	ENSMUSG00000026743.17	ENSMUST00000154041.8	825	7	-99	11	-51	-11	multi-exon	FALSE	canonical	3	39	junction_3	71.9639184283037	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAAAAGTAAGTGGA	4591	False	NA	NA	False	NA	NA	NA	18069395	18131029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944
Isoform_105743_7	chr2	+	4939	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	20	2	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	60.4211973436093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4662	False	NA	14	True	AATAAA	-18	NA	18069466	18217201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_10576_9	chr10	+	182	1	Intergenic	novelGene_1227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTATTCTCTGAAGTT	NA	False	NA	NA	False	AATAAA	-5	NA	122093948	122094130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_122093900_122094100
Isoform_105761_187	chr2	+	925	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	10	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	22.7909756576714	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTGGAGTTTGTGTG	70	False	NA	37	True	AATAAA	-31	NA	18677243	18681042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
Isoform_105762_6	chr2	+	1129	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	-206	12	-167	-11	multi-exon	FALSE	canonical	3	388	junction_2	22.7909756576714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCGGCATTCTGTTT	0	True	NA	25	True	AATAAA	-19	NA	18677027	18681030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
Isoform_105763_3	chr2	+	2203	7	NIC	ENSMUSG00000051154.12	novel	935	8	NA	NA	0	-12	intron_retention	FALSE	canonical	3	388	junction_1	21.7842960766593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGCGGCATTCTGTT	70	False	NA	24	True	AATAAA	-18	NA	18677243	18681029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
Isoform_105764_4	chr2	+	2729	4	FSM	ENSMUSG00000051154.12	ENSMUST00000130537.8	544	4	-1888	-297	23	-10	multi-exon	FALSE	canonical	3	404	junction_2	14.522013940528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCGGCATTCTGTTTG	96	False	NA	26	True	AATAAA	-20	NA	18677269	18681031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18679528_18679619_18679677_18679760_18679821_18680677
Isoform_105765_7	chr2	+	3259	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	-162	497	-162	2	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTATGCTCTTTAAT	4493	False	NA	3	True	AATAAA	-16	NA	18681666	18690943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
Isoform_105766_41	chr2	+	2946	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	151	497	-111	2	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTATGCTCTTTAAT	4806	False	NA	3	True	AATAAA	-16	NA	18681979	18690943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
Isoform_105767_32	chr2	+	3452	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	142	0	-120	0	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGGTTTGCTTCTTAA	4797	False	NA	10	True	AATAAA	-15	NA	18681970	18691440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
Isoform_10577_8	chr10	+	172	1	Intergenic	novelGene_1228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAAACTATTCAA	NA	False	NA	NA	False	NA	NA	NA	122782692	122782864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_122782700_122782900
Isoform_105771_4	chr2	+	3732	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	-138	0	-138	0	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGGTTTGCTTCTTAA	4517	False	NA	10	True	AATAAA	-15	NA	18681690	18691440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
Isoform_105774_215	chr2	+	1182	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	14	0	14	0	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTCTCAGTCTGT	4798	False	NA	19	True	AATAAA	-20	NA	19376460	19399787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
Isoform_105775_12	chr2	+	1255	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	14	-73	14	73	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATTAAAAAAAAAA	4798	False	NA	92	True	NA	NA	NA	19376460	19399860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
Isoform_105776_8	chr2	+	1016	2	ISM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	21430	0	21225	0	3prime_fragment	FALSE	canonical	3	173	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTCTCAGTCTGT	8825	False	NA	19	True	AATAAA	-20	NA	19397876	19399787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_19398167_19399061
Isoform_105779_33	chr2	+	3254	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9567	24822	-177	3	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGGGTTTTGTTGTTT	4619	False	NA	29	True	AATATA	-30	NA	20524424	20790513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
Isoform_105780_20	chr2	+	3993	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9573	24077	-171	748	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAGAGAAAAAAAAAAAAAA	4625	False	NA	NA	False	NA	NA	NA	20524430	20791258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
Isoform_105782_6	chr2	+	5566	18	ISM	ENSMUSG00000036617.18	ENSMUST00000114614.8	5898	19	9585	0	-159	0	3prime_fragment	FALSE	canonical	3	21	junction_12	53.6124114122788	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4637	False	NA	22	True	AATAAA	-14	NA	20524442	20815335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
Isoform_105784_37	chr2	+	7288	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	40.2682831275283	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4625	False	NA	22	True	AATAAA	-14	NA	20524430	20815335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
Isoform_105788_50	chr2	+	5611	18	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9573	0	-171	0	3prime_fragment	FALSE	canonical	3	69	junction_16	36.8251268212062	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4625	False	NA	22	True	AATAAA	-14	NA	20524430	20815335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
Isoform_10579_6	chr10	+	176	1	Intergenic	novelGene_742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGAGCTCTAATACAGA	NA	False	NA	NA	False	NA	NA	NA	17794076	17794252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_17794100_17794300
Isoform_105792_6	chr2	+	7170	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-173	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	54.0828125866615	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4623	False	NA	22	True	AATAAA	-14	NA	20524428	20815335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20810395_20810474_20810585_20812185_20812712_20812836_20813520
Isoform_105793_8	chr2	+	5491	17	NIC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	49.746702152002	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4625	False	NA	22	True	AATAAA	-14	NA	20524430	20815335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
Isoform_105794_5	chr2	+	7295	20	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	4	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	52.8005183387635	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGACTTCCTTTCCTG	4619	False	NA	26	True	AATAAA	-18	NA	20524424	20815339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
Isoform_105795_3	chr2	+	5438	18	NNC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-171	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	52.6070501939028	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTACCTTGTC	4625	False	NA	11	True	AATAAA	-18	NA	20524430	20815165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
Isoform_105796_3	chr2	+	5488	17	NNC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-171	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_15	62.5731759122869	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4625	False	NA	22	True	AATAAA	-14	NA	20524430	20815335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20812712_20812836_20813520
Isoform_10580_3	chr10	-	2051	1	NIC	ENSMUSG00000034602.16	novel	9301	36	NA	NA	9	-39036	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122912279	122910228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_122910200_122912300
Isoform_105808_13	chr2	+	1574	2	FSM	ENSMUSG00000075514.5	ENSMUST00000126967.2	854	2	-368	-352	-368	352	multi-exon	FALSE	canonical	3	36	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTATATTTGTGATTT	3241	False	NA	9	True	AATAAA	-20	NA	20973496	20975160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_20974195_20974284
Isoform_105809_92	chr2	+	2611	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	11	1277	-4	453	multi-exon	FALSE	canonical	3	53	junction_1	4.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAGCATTTGCTTTATTT	4795	False	NA	14	True	AATAAA	-23	NA	21210545	21218543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_21210657_21214695_21214853_21216200
Isoform_105810_35	chr2	+	3546	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	30	323	-5	310	multi-exon	FALSE	canonical	3	53	junction_1	4.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCAGCTCTCTGGTTTTG	4814	False	NA	NA	False	ATTAAA	-15	NA	21210564	21219497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_21210657_21214695_21214853_21216200
Isoform_105812_6	chr2	+	1719	12	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-10	3	intron_retention	FALSE	canonical	3	18	junction_1	114.335594191719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAAGTGGTTTGTCTT	5671	False	NA	11	True	AATAAA	-13	NA	22785596	22830270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_22785775_22789930_22789996_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
Isoform_105813_9	chr2	+	1621	12	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	8	-5	intron_retention	FALSE	canonical	3	18	junction_1	98.1149604012836	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGTGGTTTGTCTTTGT	5689	False	NA	14	True	AATAAA	-16	NA	22785614	22830273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_22785775_22789930_22789996_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
Isoform_105814_6	chr2	+	1672	11	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-22	-2	intron_retention	FALSE	canonical	3	20	junction_4	78.6860216302743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTGTCTTTGTTTC	5659	False	NA	17	True	AATAAA	-19	NA	22785584	22830276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
Isoform_105815_6	chr2	+	1662	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-15	2	intron_retention	FALSE	canonical	3	20	junction_4	102.88192261034	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGTGGTTTGTCT	5666	False	NA	10	True	AATAAA	-12	NA	22785591	22830269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834
Isoform_105816_217	chr2	+	1560	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	74	8	1	3	multi-exon	FALSE	canonical	3	239	junction_4	19.641792178923	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAAGTGGTTTGTCTT	5682	False	NA	11	True	AATAAA	-13	NA	22785607	22830270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
Isoform_105818_30	chr2	+	1679	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	-38	1	-38	-1	multi-exon	FALSE	canonical	3	239	junction_4	19.641792178923	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTTTGTCTTTGTTTCA	5570	False	NA	18	True	AATAAA	-20	NA	22785495	22830277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
Isoform_105820_4	chr2	+	1564	10	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-41	-5	intron_retention	FALSE	canonical	3	31	junction_8	77.9635875755748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGTGGTTTGTCTTTGT	5567	False	NA	14	True	AATAAA	-16	NA	22785492	22830273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22825570_22825652_22829834
Isoform_105821_20	chr2	+	1418	10	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	3	1	intron_retention	FALSE	canonical	3	31	junction_8	77.9635875755748	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCAAGTGGTTTGTC	5708	False	NA	9	True	AATAAA	-11	NA	22785633	22830268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22825570_22825652_22829834
Isoform_105823_5	chr2	+	3746	14	NIC	ENSMUSG00000026781.18	novel	4566	14	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	39.0328340013573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	22958237	23004516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_22958299_22958891_22959078_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105824_34	chr2	+	3581	13	FSM	ENSMUSG00000026781.18	ENSMUST00000028121.15	3630	13	40	9	7	-6	multi-exon	FALSE	canonical	3	36	junction_1	26.6993289553627	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	22958219	23004516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105825_5	chr2	+	3661	13	FSM	ENSMUSG00000026781.18	ENSMUST00000028121.15	3630	13	-34	3	-33	0	multi-exon	FALSE	canonical	3	36	junction_1	26.6993289553627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGTATTGACT	NA	False	NA	NA	False	AATAAA	-17	NA	22958145	23004522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105826_40	chr2	+	3548	13	FSM	ENSMUSG00000026781.18	ENSMUST00000227809.2	1986	13	37	-1599	3	-6	multi-exon	FALSE	canonical	3	36	junction_1	25.6850583457041	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	22958249	23004516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105827_8	chr2	+	3657	13	FSM	ENSMUSG00000026781.18	ENSMUST00000227809.2	1986	13	-66	-1605	-32	0	multi-exon	FALSE	canonical	3	36	junction_1	25.6850583457041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGTATTGACT	NA	False	NA	NA	False	AATAAA	-17	NA	22958146	23004522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105829_12	chr2	+	3665	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114529.10	3630	13	56	-91	52	-4	multi-exon	FALSE	canonical	3	40	junction_1	26.0302975182553	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAATGCTAACTGTATT	NA	False	NA	NA	False	AATAAA	-13	NA	22959135	23004518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105830_16	chr2	+	3585	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114529.10	3630	13	136	-91	-123	-4	multi-exon	FALSE	canonical	3	40	junction_1	26.0302975182553	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAATGCTAACTGTATT	NA	False	NA	NA	False	AATAAA	-13	NA	22959215	23004518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105831_11	chr2	+	3724	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114529.10	3630	13	1	-95	1	0	multi-exon	FALSE	canonical	3	40	junction_1	26.0302975182553	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGTATTGACT	NA	False	NA	NA	False	AATAAA	-17	NA	22959080	23004522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105832_14	chr2	+	3715	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	1	9	1	-6	multi-exon	FALSE	canonical	3	40	junction_1	24.981103969912	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	22959080	23004516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105836_7	chr2	+	3623	12	ISM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	259	9	0	-6	3prime_fragment	FALSE	canonical	3	49	junction_8	20.3972936140278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	22959338	23004516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_105844_724	chr2	+	3012	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	1546	0	-1546	multi-exon	TRUE	canonical	3	665	junction_5	65.7463325738674	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATCTGTATAATTACA	7222	False	NA	111	True	AGTAAA	-18	NA	23046529	23087726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
Isoform_105850_159	chr2	+	4546	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	151	10	2	-10	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTTTATCACATTCCA	7224	False	NA	14	True	AATAAA	-16	NA	23046531	23089262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
Isoform_10586_29	chr10	-	209	1	Intergenic	novelGene_1229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTTTAAAATAAGAATTG	NA	False	NA	NA	False	AATAAA	-42	NA	125636076	125635867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_125635900_125636100
Isoform_10587_13	chr10	-	175	1	Intergenic	novelGene_1230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTCTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	126220402	126220227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_126220200_126220400
Isoform_10588_23	chr10	+	174	1	Intergenic	novelGene_1231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	126490064	126490238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_126490100_126490200
Isoform_105880_12	chr2	+	3497	17	FSM	ENSMUSG00000026979.17	ENSMUST00000056641.15	4748	17	1	1250	1	472	multi-exon	FALSE	canonical	2	7	junction_1	5.02338282435253	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGCTCCACTTGCGGAA	NA	False	NA	NA	False	NA	NA	NA	24275344	24297491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
Isoform_105881_5	chr2	+	4759	17	FSM	ENSMUSG00000026979.17	ENSMUST00000056641.15	4748	17	1	-12	1	12	multi-exon	FALSE	canonical	2	7	junction_1	5.02338282435253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTCATCCACTTAC	NA	False	NA	NA	False	NA	NA	NA	24275344	24298753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
Isoform_105884_98	chr2	+	2813	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-16	1106	-16	-1106	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGGTTGTTGTAAAGGGT	NA	False	NA	8	True	GATAAA	-18	NA	24839787	24850981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
Isoform_105885_27	chr2	+	3913	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-16	6	-16	-6	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATTTTTAGTTTTTCG	NA	False	NA	NA	False	NA	NA	NA	24839787	24852081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
Isoform_105886_41	chr2	+	3479	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-16	440	-16	-440	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGAAATTGTTGTCTGTT	NA	False	NA	-3	True	NA	NA	NA	24839787	24851647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
Isoform_105889_861	chr2	+	1260	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-16	2659	-16	150	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTCGTGTAGTCAAGCT	NA	False	NA	37	True	NA	NA	NA	24839787	24849428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
Isoform_10589_3	chr10	+	180	1	Intergenic	novelGene_1232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAGCTGAACAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	126702739	126702919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_126702700_126702900
Isoform_105891_125	chr2	+	1372	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-16	2547	-16	262	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGGCCAGTCTCTGCTC	NA	False	NA	11	True	AGTAAA	-15	NA	24839787	24849540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
Isoform_105899_32	chr2	+	1639	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	28.4250659629841	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTATGCATCTGTC	NA	False	NA	35	True	ATTAAA	-38	NA	24852440	24862174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_24852638_24853034_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_10590_30	chr10	+	173	1	Intergenic	novelGene_1233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAGGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	126712005	126712178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_126712000_126712200
Isoform_105900_3	chr2	+	2008	8	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	2	-24	intron_retention	FALSE	canonical	3	39	junction_3	29.7458623430321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAATTTTAGAAAT	NA	False	NA	10	True	ATTAAA	-13	NA	24852436	24862149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_24852638_24853034_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859691_24861534
Isoform_105901_88	chr2	+	1605	9	FSM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	60	1	-6	1	multi-exon	FALSE	canonical	3	62	junction_3	22.9945645751338	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTATGCATCTGTC	NA	False	NA	35	True	ATTAAA	-38	NA	24852471	24862174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_105902_21	chr2	+	1534	8	NIC	ENSMUSG00000026975.11	novel	1554	8	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	37.5004761874528	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTGTATGCATCTG	NA	False	NA	33	True	ATTAAA	-36	NA	24852455	24862172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_24852638_24853034_24853169_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_105903_7	chr2	+	1484	8	FSM	ENSMUSG00000026975.11	ENSMUST00000126909.8	1554	8	46	24	2	-24	multi-exon	FALSE	canonical	3	9	junction_2	38.473950901346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAATTTTAGAAAT	NA	False	NA	10	True	ATTAAA	-13	NA	24852479	24862149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24852638_24853034_24853169_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_105905_5	chr2	+	1388	7	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	42.6122700117649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	36	True	ATTAAA	-39	NA	24852467	24862175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_24852638_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_105906_14	chr2	+	1813	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	36.416857360294	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTGTATGCATCTG	NA	False	NA	33	True	ATTAAA	-36	NA	24852449	24862172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_24852823_24853034_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_105907_6	chr2	+	1845	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	33.0924368247489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTATGCATCTGT	NA	False	NA	34	True	ATTAAA	-37	NA	24852415	24862173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_24852823_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_105910_30	chr2	+	4519	35	FSM	ENSMUSG00000036833.17	ENSMUST00000045295.14	4574	35	55	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7.94602248652754	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTACTCTG	NA	False	NA	10	True	AATAAA	-13	NA	24866099	24944069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
Isoform_105914_9	chr2	+	2899	15	FSM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	23	0	0	0	multi-exon	TRUE	canonical	1	2	junction_11	1.80136003041693	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGTCTTCTC	9554	False	NA	2	True	ATTAAA	-18	NA	24944418	24952893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
Isoform_105915_9	chr2	+	3975	14	NIC	ENSMUSG00000006476.20	novel	2922	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_10	1.86528548507418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGTCTTCTC	9554	False	NA	2	True	ATTAAA	-18	NA	24944418	24952893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
Isoform_105916_807	chr2	+	2792	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	142	junction_1	10.4986771653491	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGCCTTCTTTAC	NA	False	NA	14	True	AATAAA	-16	NA	25152624	25159897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
Isoform_105918_31	chr2	+	2864	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	-77	0	-77	0	multi-exon	FALSE	canonical	3	142	junction_1	10.4986771653491	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGCCTTCTTTAC	NA	False	NA	14	True	AATAAA	-16	NA	25152552	25159897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
Isoform_10592_14	chr10	-	188	1	Intergenic	novelGene_1234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAATAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	126757737	126757549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_126757500_126757700
Isoform_105925_18	chr2	+	2877	3	NIC	ENSMUSG00000048707.10	novel	2787	4	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	142	junction_1	10	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTTTTGCCTTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	25152624	25159895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25154566_25158843_25159252_25159367
Isoform_105926_1172	chr2	+	2677	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	24	303	24	-303	multi-exon	FALSE	canonical	3	410	junction_2	48.8355374929182	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGGATCCCAT	NA	False	NA	35	True	ATTAAA	-22	NA	25162513	25175624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
Isoform_105927_65	chr2	+	2987	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	18	-1	18	1	multi-exon	TRUE	canonical	3	410	junction_2	48.8355374929182	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGGCATCTGTGG	NA	False	NA	19	True	ATTAAA	-20	NA	25162507	25175928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
Isoform_10593_18	chr10	+	190	1	Intergenic	novelGene_1235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAGAGTAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	126758915	126759105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_126758900_126759100
Isoform_105930_36	chr2	+	2941	12	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	22	-303	intron_retention	FALSE	canonical	3	416	junction_6	46.7767689745934	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGGATCCCAT	NA	False	NA	35	True	ATTAAA	-22	NA	25162511	25175624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25162690_25162926_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
Isoform_10594_5	chr10	-	181	1	Intergenic	novelGene_1236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGTCAGCATTTAA	NA	False	NA	NA	False	NA	NA	NA	126762535	126762354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_126762400_126762500
Isoform_105944_981	chr2	+	3726	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	28	1	-5	-1	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGCAGTGTTACTT	3993	False	NA	32	True	ATTAAA	-20	NA	25222768	25242223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
Isoform_105948_37	chr2	+	4076	12	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-12	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	112.714002151426	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGCAGTGTTACTT	3986	False	NA	32	True	ATTAAA	-20	NA	25222761	25242223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233236_25233422_25234979_25235129_25235417_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
Isoform_105961_4	chr2	+	2438	6	ISM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	29	731	-10	679	intron_retention	FALSE	canonical	3	90	junction_3	9.97196068985433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCAGCACGTCTGCATC	6686	False	NA	1	True	NA	NA	NA	25262361	25267494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175
Isoform_105962_86	chr2	+	2385	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	8	728	-1	682	multi-exon	FALSE	canonical	3	90	junction_3	10.077477638554	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACGTCTGCATCTTT	6665	False	NA	4	True	NA	NA	NA	25262340	25267497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
Isoform_105967_8	chr2	+	2292	6	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	105	junction_2	6.41872261435249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTGTATTTCTCATAA	6696	False	NA	6	True	AGTAAA	-15	NA	25262371	25266815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25263011_25263427_25263530_25264963_25265844_25265979_25266088_25266175_25266287_25266363
Isoform_105968_7	chr2	+	2972	6	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	1	681	intron_retention	FALSE	canonical	3	105	junction_2	6.41872261435249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCACGTCTGCATCTT	6697	False	NA	3	True	NA	NA	NA	25262372	25267496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25263011_25263427_25263530_25264963_25265844_25265979_25266088_25266175_25266287_25266363
Isoform_105969_16	chr2	+	1598	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	-1	3	-1	0	multi-exon	FALSE	canonical	3	11	junction_1	40.9536323175369	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCTGTATTTCTCA	6665	False	NA	3	True	AGTAAA	-12	NA	25262340	25266812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
Isoform_10597_4	chr10	-	173	1	Intergenic	novelGene_1237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTAAAAATAAAATGTCCA	NA	False	NA	NA	False	NA	NA	NA	126790143	126789970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_126790000_126790100
Isoform_105970_4	chr2	+	2283	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	-1	-682	-1	682	multi-exon	FALSE	canonical	3	11	junction_1	40.9536323175369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACGTCTGCATCTTT	6665	False	NA	4	True	NA	NA	NA	25262340	25267497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
Isoform_105972_3	chr2	+	3467	4	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	2	683	intron_retention	FALSE	canonical	3	105	junction_1	6.68331255192114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCACGTCTGCATCTTTT	6698	False	NA	5	True	NA	NA	NA	25262373	25267498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25263530_25264963_25265844_25265979_25266088_25266175
Isoform_105973_4	chr2	+	2740	5	NIC	ENSMUSG00000026955.14	novel	1600	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	105	junction_1	6.34428877022476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTGTATTTCTCATAA	6665	False	NA	6	True	AGTAAA	-15	NA	25262340	25266815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25263530_25264963_25265844_25265979_25266088_25266175_25266287_25266363
Isoform_105974_3	chr2	+	5079	2	NIC	ENSMUSG00000026955.14	novel	791	3	NA	NA	-1	681	intron_retention	FALSE	canonical	3	118	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCACGTCTGCATCTT	6665	False	NA	3	True	NA	NA	NA	25262340	25267496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25266287_25266363
Isoform_105975_10	chr2	+	1929	9	FSM	ENSMUSG00000015085.9	ENSMUST00000028328.3	1935	9	3	3	3	-3	multi-exon	FALSE	canonical	1	2	junction_1	1.69096865730859	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAAGTGTCCATAGGG	NA	False	NA	NA	False	AATAAA	-16	NA	25285888	25291330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25286102_25287407_25287526_25288012_25288164_25288302_25288463_25288543_25288772_25289293_25289549_25289628_25289749_25290575_25290711_25290781
Isoform_105977_19	chr2	+	1498	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	-16	3	-16	0	multi-exon	FALSE	canonical	3	17	junction_4	4.24264068711928	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTTCTGGGTTCAC	3110	False	NA	9	True	ATTAAA	-17	NA	25293066	25299503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
Isoform_105978_27	chr2	+	8054	48	FSM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	-21	0	-21	0	multi-exon	TRUE	canonical	3	27	junction_14	9.25265307651151	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACCTGTGGGAGCCTGTG	NA	False	NA	11	True	AATAAA	-14	NA	25318693	25338552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
Isoform_105980_68	chr2	+	2308	9	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	79.815314163386	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390855	25395483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25390899_25391947_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_105982_519	chr2	+	2290	9	FSM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	98	0	-11	0	multi-exon	FALSE	canonical	3	164	junction_1	35.5176012703561	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390859	25395483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_105983_27	chr2	+	2359	9	FSM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	29	0	29	0	multi-exon	FALSE	canonical	3	164	junction_1	35.5176012703561	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390790	25395483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_105987_33	chr2	+	2129	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	82.0069683450306	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390859	25395480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25390899_25391947_25392164_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_105990_13	chr2	+	3355	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	26	junction_2	82.7625075324644	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390856	25395482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_105993_153	chr2	+	3339	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	227	junction_5	21.7649784220956	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390859	25395483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_105997_28	chr2	+	3653	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	231	junction_2	20.763884243775	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390858	25395483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
Isoform_106_41242	ERCC-00096	+	1089	1	FSM	ERCC-00096A	DQ459429	1091	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	41242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	1	1090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00096_+_0_1100
Isoform_106006_1795	chr2	+	697	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	25	0	1	0	multi-exon	FALSE	canonical	3	2396	junction_4	232.166965781095	1795	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCCTGGATTTTTCCT	NA	False	NA	17	True	NA	NA	NA	25447883	25452094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
Isoform_106013_20	chr2	+	3406	14	FSM	ENSMUSG00000026930.16	ENSMUST00000066936.9	3384	14	-22	0	-22	0	multi-exon	FALSE	canonical	1	3	junction_2	5.66521619677599	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	26205504	26238249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230597_26234613_26234771_26235162_26235372_26236818
Isoform_106015_6	chr2	+	3214	13	FSM	ENSMUSG00000026930.16	ENSMUST00000078616.12	3127	13	-87	0	-10	0	multi-exon	FALSE	canonical	1	3	junction_2	5.58954877924467	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	26205516	26238249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26234613_26234771_26235162_26235372_26236818
Isoform_106016_12	chr2	+	1936	4	FSM	ENSMUSG00000026930.16	ENSMUST00000147873.8	977	4	0	-959	0	-3	multi-exon	FALSE	canonical	2	4	junction_1	7.25718035235908	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGGCTTCTGTTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	26232300	26238246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26232443_26234613_26234771_26235162_26235372_26236818
Isoform_106017_10	chr2	+	2079	4	FSM	ENSMUSG00000026930.16	ENSMUST00000147873.8	977	4	-140	-962	-140	0	multi-exon	FALSE	canonical	2	4	junction_1	7.25718035235908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	26232160	26238249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26232443_26234613_26234771_26235162_26235372_26236818
Isoform_106020_2322	chr2	+	3124	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	11	0	2	0	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	2322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGCCCCTAGGTGT	655	False	NA	19	True	AATAAA	-16	NA	26279361	26287134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
Isoform_106051_6	chr2	+	1293	8	ISM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	7	0	7	0	intron_retention	FALSE	canonical	3	256	junction_1	48.6524534272404	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	179	False	NA	12	True	AATAAA	-12	NA	26476648	26482693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129
Isoform_106052_17	chr2	+	1143	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	105.177751330783	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	154	False	NA	13	True	AATAAA	-13	NA	26476623	26482694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482254_26482429
Isoform_106053_19	chr2	+	1132	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	104.879692982007	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	173	False	NA	13	True	AATAAA	-13	NA	26476642	26482694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482262_26482429
Isoform_106054_303	chr2	+	1156	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	6	1	6	-1	multi-exon	FALSE	canonical	3	256	junction_1	46.4239970273995	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTTGTCAATGGGGGA	178	False	NA	11	True	AATAAA	-11	NA	26476647	26482692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
Isoform_106056_21	chr2	+	1089	8	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	112.260811487885	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	182	False	NA	13	True	AATAAA	-13	NA	26476651	26482694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26482129_26482293_26482429
Isoform_106057_7	chr2	+	1265	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	112.21853679317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	210	False	NA	13	True	AATAAA	-13	NA	26476679	26482694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26476833_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
Isoform_106059_93	chr2	+	1581	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	39	2	2	-2	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGGGTATGTGGATCCT	2474	False	NA	15	True	AATAAA	-15	NA	26518507	26526507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
Isoform_106060_23	chr2	+	1626	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	-9	5	-9	-5	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCGGGTATGTGGAT	2426	False	NA	12	True	AATAAA	-12	NA	26518459	26526504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
Isoform_106061_4	chr2	+	1771	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	-151	2	-151	-2	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGGGTATGTGGATCCT	2284	False	NA	15	True	AATAAA	-15	NA	26518317	26526507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
Isoform_106062_3	chr2	+	1447	4	NIC	ENSMUSG00000036186.6	novel	1622	5	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	24.0554914035583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGGGTATGTGGATCCT	2500	False	NA	15	True	AATAAA	-15	NA	26518533	26526507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26518712_26522615_26522751_26524998_26525176_26525550
Isoform_106065_3653	chr2	+	860	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	42	12	-11	-12	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	3653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCTTGACTGCCTTT	NA	False	NA	-6	True	AATATA	-7	NA	26800817	26803318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
Isoform_106066_632	chr2	+	913	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	-11	12	-11	-12	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCTTGACTGCCTTT	NA	False	NA	-6	True	AATATA	-7	NA	26800764	26803318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
Isoform_106067_66	chr2	+	967	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	-65	12	-65	-12	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCTTGACTGCCTTT	NA	False	NA	-6	True	AATATA	-7	NA	26800710	26803318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
Isoform_106075_96	chr2	+	1035	7	NIC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-11	-12	intron_retention	FALSE	canonical	3	4686	junction_6	264.743114483959	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCTTGACTGCCTTT	NA	False	NA	-6	True	AATATA	-7	NA	26800817	26803318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
Isoform_106088_7	chr17	+	199	1	FSM	ENSMUSG00000116757.2	ENSMUST00000231695.2	798	1	639	-40	639	40	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTTAAAAAAAAATCCAT	NA	False	NA	NA	False	AATATA	-7	NA	16778146	16778345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_16778100_16778300
Isoform_106089_12	chr2	+	1191	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	119.474516111177	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATATGTGTATCATTG	NA	False	NA	35	True	CATAAA	-30	NA	26806396	26810193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808876_26809068_26809203_26809371_26809738
Isoform_106090_17	chr2	+	1308	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	3	-2	combination_of_known_junctions	TRUE	canonical	3	27	junction_5	113.91821627817	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATATGTGTATCATTG	NA	False	NA	35	True	CATAAA	-30	NA	26806395	26810193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809614
Isoform_106091_214	chr2	+	1183	6	FSM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	18	2	4	-2	multi-exon	FALSE	canonical	3	245	junction_5	33.4388995034227	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATATGTGTATCATTG	NA	False	NA	35	True	CATAAA	-30	NA	26806396	26810193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
Isoform_106093_6	chr2	+	1178	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	7	junction_5	121.766005108158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATATGTGTATCATTG	NA	False	NA	35	True	CATAAA	-30	NA	26806395	26810193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809744
Isoform_106094_14	chr2	+	1115	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	115.994827470883	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTGCCAAACCAATA	NA	False	NA	23	True	CATAAA	-18	NA	26806396	26810181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808940_26809068_26809203_26809371_26809738
Isoform_106095_5	chr2	+	2898	4	ISM	ENSMUSG00000014873.16	ENSMUST00000126947.8	2519	5	4	-15	4	4	intron_retention	FALSE	canonical	3	305	junction_3	11.1455023315337	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATCATTGTTTTCT	NA	False	NA	41	True	CATAAA	-36	NA	26806396	26810199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_26806516_26806716_26806872_26807439_26809068_26809203
Isoform_106096_26	chr2	+	2512	5	FSM	ENSMUSG00000014873.16	ENSMUST00000126947.8	2519	5	4	3	4	3	multi-exon	FALSE	canonical	3	245	junction_4	33.741665637606	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTGCCAAACCAATA	NA	False	NA	23	True	CATAAA	-18	NA	26806396	26810181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_26806516_26806716_26806872_26807439_26809068_26809203_26809371_26809738
Isoform_106097_6	chr2	+	2713	4	NIC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	3	2	intron_retention	FALSE	canonical	3	245	junction_3	36.3593179253957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTTTGCCAAACCAAT	NA	False	NA	22	True	CATAAA	-17	NA	26806395	26810180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_26806872_26807439_26809068_26809203_26809371_26809738
Isoform_106099_26	chr2	+	2606	6	NNC	ENSMUSG00000015488.15	novel	2689	5	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.6641024692693	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTCTGCCTGTCACC	NA	False	NA	42	True	AGTAAA	-19	NA	26899961	26911102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_26900118_26904104_26904178_26905495_26905622_26908384_26908493_26908899_26909516_26909575
Isoform_106100_3128	chr2	+	2839	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	50	1	50	-1	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTCCATATAAGTTT	NA	False	NA	32	True	AATAAA	-18	NA	27405218	27426546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
Isoform_106101_297	chr2	+	2895	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	-7	2	-7	-2	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405161	27426545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
Isoform_106130_50	chr2	+	2078	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	62	2765	1	9	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGCCCTGAGATATCA	NA	False	NA	3	True	TATAAA	-11	NA	27567274	27650204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_106131_31	chr2	+	4791	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	114	0	53	0	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTGTGTTGGGGAGT	NA	False	NA	28	True	AATATA	-18	NA	27567326	27652969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_106132_4	chr2	+	2258	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	-111	2758	-111	16	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGAGATATCACTCCAAG	NA	False	NA	10	True	TATAAA	-18	NA	27567101	27650211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_106133_5	chr2	+	4937	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	-30	-2	-30	2	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTGTTGGGGAGTCC	NA	False	NA	30	True	AATATA	-20	NA	27567182	27652971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_106134_4	chr2	+	5015	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	-113	3	-113	-3	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGTCCTGTGTTGGGG	NA	False	NA	25	True	AATATA	-15	NA	27567099	27652966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_106135_7	chr2	+	1754	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	22	3129	22	140	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCATCTTTACTCATGCT	NA	False	NA	NA	False	NA	NA	NA	27567234	27649840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_106137_7	chr2	+	1863	9	NIC	ENSMUSG00000015846.16	novel	673	4	NA	NA	33	9	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	28.6879765755621	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGCCCTGAGATATCA	5048	False	NA	3	True	TATAAA	-11	NA	27630245	27650204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_27630495_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_106139_5	chr2	+	6496	66	FSM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	-49	1959	-49	126	multi-exon	TRUE	canonical	2	10	junction_13	12.1052973880063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAAGTGTGCCTG	NA	False	NA	37	True	AGTAAA	-19	NA	27776387	27927567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27776937_27812028_27812197_27818053_27818268_27819390_27819554_27839638_27839771_27840638_27840771_27841298_27841539_27842284_27842459_27842980_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
Isoform_106140_5	chr2	+	1131	4	FSM	ENSMUSG00000026833.19	ENSMUST00000152415.2	1102	4	-28	-1	-28	1	multi-exon	FALSE	canonical	2	4	junction_1	19.3045763140937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTGGTGTTCTGAGG	6466	False	NA	4	True	AATAAA	-12	NA	28082975	28104438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28083475_28098089_28098240_28102543_28102700_28104112
Isoform_106141_5	chr2	+	2814	6	FSM	ENSMUSG00000026833.19	ENSMUST00000100244.10	2686	6	-131	3	-30	-3	multi-exon	FALSE	canonical	2	4	junction_1	17.749366185867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCGATTTGCTTATTG	6464	False	NA	NA	False	AATAAA	-13	NA	28082973	28120745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28083475_28098089_28098240_28102543_28102700_28104620_28104841_28112562_28112670_28119065
Isoform_106142_61	chr2	+	2755	6	FSM	ENSMUSG00000026833.19	ENSMUST00000028177.11	2757	6	0	2	0	-2	multi-exon	FALSE	canonical	3	35	junction_4	5.85149553533112	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCGATTTGCTTATTGT	203	False	NA	NA	False	AATAAA	-14	NA	28095670	28120746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28096112_28098089_28098240_28102543_28102700_28104620_28104841_28112562_28112670_28119065
Isoform_106143_8	chr2	+	5552	4	FSM	ENSMUSG00000035829.14	ENSMUST00000128199.8	617	4	67	-5002	1	0	multi-exon	FALSE	canonical	2	11	junction_1	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28336878	28345520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28336909_28337896_28337995_28338703_28338921_28340313
Isoform_106144_5	chr2	+	5794	4	FSM	ENSMUSG00000035829.14	ENSMUST00000128199.8	617	4	-176	-5001	-176	-1	multi-exon	FALSE	canonical	2	11	junction_1	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCCTTTGTTCTTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	28336635	28345519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28336909_28337896_28337995_28338703_28338921_28340313
Isoform_106145_6	chr2	+	5334	3	NIC	ENSMUSG00000035829.14	novel	617	4	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28336879	28345520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28336909_28337896_28337995_28340313
Isoform_106146_3	chr2	+	6411	3	FSM	ENSMUSG00000035829.14	ENSMUST00000040324.14	5466	3	-945	0	130	0	multi-exon	FALSE	canonical	3	12	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28337007	28345520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28337995_28338703_28338921_28340313
Isoform_106148_966	chr2	+	2064	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	1	15	1	-2	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCTGGTGTCAGACTC	NA	False	NA	13	True	NA	NA	NA	28358078	28361175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
Isoform_106151_14	chr2	+	2665	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	20	-605	4	605	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTGGAAAATTTGTCA	NA	False	NA	NA	False	NA	NA	NA	28358097	28361795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
Isoform_106155_20	chr2	+	2155	5	NNC	ENSMUSG00000035772.12	novel	2429	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	280.38321989734	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGGTGTCAGACTCTC	NA	False	NA	15	True	NA	NA	NA	28358097	28361177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_28358155_28358254_28358372_28358832_28358963_28359232_28359341_28359434
Isoform_106160_14	chr2	+	3785	18	FSM	ENSMUSG00000026821.17	ENSMUST00000028170.15	3590	18	-205	10	-4	1	multi-exon	FALSE	canonical	3	33	junction_3	10.8097738677858	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGTCACTGTGGTTT	NA	False	NA	15	True	ATTAAA	-16	NA	28403132	28443083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_106161_87	chr2	+	3637	18	FSM	ENSMUSG00000026821.17	ENSMUST00000028170.15	3590	18	-46	-1	-46	1	multi-exon	FALSE	canonical	3	33	junction_3	10.8097738677858	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTTACTGTTTTTA	NA	False	NA	26	True	ATTAAA	-27	NA	28403291	28443094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_106163_5	chr2	+	3450	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-39	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	17.0647048685037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCACTGTGGTTTTACTG	NA	False	NA	20	True	ATTAAA	-21	NA	28403298	28443088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439475_28439545_28440460_28440576_28442103
Isoform_106164_3	chr2	+	3609	18	NNC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.9786512013612	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	False	NA	14	True	ATTAAA	-15	NA	28403132	28443082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_28403573_28430722_28430834_28432301_28432495_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439475_28439545_28440460_28440576_28442103
Isoform_106165_16	chr2	+	3726	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	12.5469361015481	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGTCACTGTGGTTT	NA	False	NA	15	True	ATTAAA	-16	NA	28403155	28443083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_106166_52	chr2	+	3617	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-73	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	12.5469361015481	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGTCACTGTGGTTT	NA	False	NA	15	True	ATTAAA	-16	NA	28403264	28443083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_106167_4	chr2	+	3432	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-54	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	18.0952879603167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGGTTTTACTGTTT	NA	False	NA	23	True	ATTAAA	-24	NA	28403283	28443091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439475_28439545_28440460_28440576_28442103
Isoform_106168_3	chr2	+	3520	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-50	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	18.297427353343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTTACTGTTTTTA	NA	False	NA	26	True	ATTAAA	-27	NA	28403287	28443094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433650_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_106169_3	chr2	+	3513	17	NNC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-47	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	21.6333076527839	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCTGGTCACTGTGGT	NA	False	NA	13	True	ATTAAA	-14	NA	28403290	28443081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_28403573_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435530_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_106170_3	chr2	+	3617	18	FSM	ENSMUSG00000026821.17	ENSMUST00000100241.10	3102	18	-81	-434	-81	0	multi-exon	FALSE	canonical	2	4	junction_1	16.9096929677323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	False	NA	14	True	ATTAAA	-15	NA	28423472	28443082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28423746_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_106171_3	chr2	+	3593	18	FSM	ENSMUSG00000026821.17	ENSMUST00000113893.8	3683	18	103	-13	-84	-2	multi-exon	FALSE	canonical	2	4	junction_1	17.9576587741977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGGTTTTACTGTTT	NA	False	NA	23	True	ATTAAA	-24	NA	28423469	28443091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28423746_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_106172_3	chr2	+	3084	10	ISM	ENSMUSG00000026812.17	ENSMUST00000153625.8	2388	11	0	1	0	-1	intron_retention	FALSE	canonical	3	21	junction_1	13.8198283028765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAAATGG	3465	False	NA	NA	False	NA	NA	NA	28531261	28563764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
Isoform_106173_3	chr2	+	2576	11	ISM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	13	17412	0	2	intron_retention	FALSE	canonical	3	21	junction_1	14.2828568570857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGGGGG	3465	False	NA	NA	False	NA	NA	NA	28531261	28563767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404
Isoform_106174_4	chr2	+	2295	12	ISM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	9	17417	3	-3	5prime_fragment	FALSE	canonical	3	21	junction_1	13.6303016829028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCGGAAAAAAAAAAAAAAAT	3461	False	NA	NA	False	NA	NA	NA	28531257	28563762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796
Isoform_106175_6	chr2	+	3660	23	FSM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	17	3997	0	-1378	multi-exon	FALSE	canonical	3	21	junction_1	11.5017066645932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGGGTCTGTCAGTGT	3469	False	NA	NA	False	NA	NA	NA	28531265	28577182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_106179_5	chr2	+	4865	23	FSM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	14	2795	1	-176	multi-exon	FALSE	canonical	3	21	junction_1	11.5017066645932	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTTGCCTGATATTCT	3466	False	NA	13	True	AATAAA	-15	NA	28531262	28578384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_10618_27	chr10	+	2047	1	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	126877826	126879873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_126877800_126879900
Isoform_106180_11	chr2	+	3958	23	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	0	-1069	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	13.3695101500725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGTCCAATATGCCA	3465	False	NA	29	True	NA	NA	NA	28531261	28577491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_106182_3	chr2	+	2300	12	ISM	ENSMUSG00000026812.17	ENSMUST00000113867.9	7682	23	29	17415	18	-1	5prime_fragment	FALSE	canonical	3	29	junction_1	12.3903454817461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAAATGG	3487	False	NA	NA	False	NA	NA	NA	28531283	28563764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796
Isoform_106184_7	chr2	+	4046	23	NIC	ENSMUSG00000026812.17	novel	7702	23	NA	NA	-1	-1035	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	10.8204734012935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCAGACAACTGGGTGGC	3455	False	NA	63	True	NA	NA	NA	28531251	28577525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_106185_9	chr2	+	3690	23	NIC	ENSMUSG00000026812.17	novel	7702	23	NA	NA	1	-1380	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	10.8204734012935	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGGGTCTGTCAGT	3466	False	NA	NA	False	NA	NA	NA	28531262	28577180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_106186_6	chr2	+	3991	23	FSM	ENSMUSG00000026812.17	ENSMUST00000113867.9	7682	23	8	3683	1	-1064	multi-exon	FALSE	canonical	2	11	junction_16	12.8165698535106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCCAATATGCCACTCTG	3466	False	NA	34	True	NA	NA	NA	28531262	28577496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_106187_6	chr2	+	3674	23	FSM	ENSMUSG00000026812.17	ENSMUST00000113867.9	7682	23	8	4000	1	-1381	multi-exon	FALSE	canonical	2	11	junction_16	12.8165698535106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAAGAGGGTCTGTCAG	3466	False	NA	NA	False	NA	NA	NA	28531262	28577179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_106189_6	chr2	+	1562	13	FSM	ENSMUSG00000026807.9	ENSMUST00000074156.7	1567	13	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_4	2.54405625374562	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGATAGCCTTCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	28590175	28703172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28590287_28592700_28592786_28599938_28599989_28602286_28602401_28606428_28606498_28623818_28623901_28624385_28624458_28625514_28625716_28629544_28629677_28632671_28632762_28649953_28650096_28699671_28699753_28702839
Isoform_106192_84	chr2	+	2924	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-8	355	-8	-355	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTTAGTCCATATGT	NA	False	NA	8	True	GATAAA	-17	NA	28730462	28795228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
Isoform_106193_56	chr2	+	3279	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-8	0	-8	0	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGGACTCAGCAGAGAAA	NA	False	NA	18	True	AATAAA	-19	NA	28730462	28795583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
Isoform_106200_120	chr2	+	3940	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	11.9745099644574	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGTGAAATGACTT	NA	False	NA	18	True	AATAAA	-20	NA	28950277	28977665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
Isoform_106201_12	chr2	+	3932	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	20.8704669063461	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTGTGTGAAATGACT	NA	False	NA	17	True	AATAAA	-19	NA	28950277	28977664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964814_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
Isoform_106206_8	chr2	+	1717	4	ISM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	116	51319	116	703	5prime_fragment	FALSE	canonical	3	157	junction_1	22.939534045447	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGACTTAATACT	NA	False	NA	NA	False	NA	NA	NA	29015119	29021164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191
Isoform_106214_10	chr2	+	10975	26	FSM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	-8	3	-8	-3	multi-exon	FALSE	canonical	3	142	junction_8	57.9545477076648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29014995	29072480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
Isoform_106218_52	chr2	+	10806	26	FSM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	165	-1	165	1	multi-exon	FALSE	canonical	3	142	junction_8	57.9545477076648	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGTTAGAAGTACTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	29015168	29072484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
Isoform_10622_4	chr10	-	197	1	Antisense	novelGene_ENSMUSG00000112639.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATTTAAAAAGAGACA	NA	False	NA	NA	False	NA	NA	NA	126907190	126906993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_126907000_126907200
Isoform_106221_11	chr2	+	10686	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	171	-1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	71.5650442293971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGGTTAGAAGTACTC	NA	False	NA	NA	False	AATAAA	-17	NA	29015174	29072482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
Isoform_10623_18	chr10	+	196	1	Intergenic	novelGene_1238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTTAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	126909054	126909250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_126909100_126909200
Isoform_106258_7	chr2	+	3170	5	ISM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	0	22004	0	2241	5prime_fragment	FALSE	canonical	3	144	junction_3	13.5738719604982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29236830	29392801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230
Isoform_106259_199	chr2	+	1234	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	13	7	-1	-7	multi-exon	FALSE	canonical	3	144	junction_3	14.0393034305954	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACAAGGCTCTGTGTTCT	NA	False	NA	25	True	AATAAA	-13	NA	29236843	29414798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
Isoform_106265_349	chr2	+	5789	24	FSM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	-1	614	-1	1	multi-exon	FALSE	canonical	3	225	junction_2	42.1435569818812	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509780	29630376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
Isoform_106269_202	chr2	+	5675	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-1	1	intron_retention	FALSE	canonical	3	94	junction_2	58.96679272801	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509780	29630376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
Isoform_106271_40	chr2	+	5714	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	8	-1	intron_retention	TRUE	canonical	3	94	junction_2	58.96679272801	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTGTCCAGGCCTT	NA	False	NA	16	True	AATAAA	-23	NA	29509739	29630374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
Isoform_106272_15	chr2	+	5541	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-4	1	intron_retention	FALSE	canonical	1	2	junction_1	78.6068606977332	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509777	29630376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29510076_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
Isoform_106297_4	chr2	+	3483	4	ISM	ENSMUSG00000026798.11	ENSMUST00000148791.2	613	6	0	2379	0	-2379	5prime_fragment	FALSE	canonical	3	105	junction_3	21.2759645296439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29678282	29683635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468
Isoform_106299_240	chr2	+	1236	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	20	735	8	22	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTCCCTTTGCCTGAGG	NA	False	NA	49	True	AATAAA	-39	NA	29678290	29687020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
Isoform_106300_10	chr2	+	1715	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	-461	737	305	20	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGCTCCCTTTGCCTGA	NA	False	NA	47	True	AATAAA	-37	NA	29677809	29687018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
Isoform_106301_11	chr2	+	1769	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	13	209	1	-209	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAAAGTGATGGTTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	29678283	29687546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
Isoform_106303_12	chr2	+	1237	7	NIC	ENSMUSG00000026798.11	novel	1991	7	NA	NA	0	18	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	46.5608920304011	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTAGCTCCCTTTGCCT	NA	False	NA	45	True	AATAAA	-35	NA	29678282	29687016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685395_29685523_29685947_29686042_29686419
Isoform_106304_426	chr2	+	2934	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	54	1066	54	-1066	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACAGCCTGGCTCCTT	NA	False	NA	29	True	AATAAA	-21	NA	29692699	29706468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
Isoform_106305_245	chr2	+	2957	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	31	1066	31	-1066	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACAGCCTGGCTCCTT	NA	False	NA	29	True	AATAAA	-21	NA	29692676	29706468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
Isoform_106309_13	chr2	+	4008	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	6	40	6	-40	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGCTTGAAGCAGGTC	NA	False	NA	NA	False	NA	NA	NA	29692651	29707494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
Isoform_106310_22	chr2	+	3972	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	42	40	42	-40	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGCTTGAAGCAGGTC	NA	False	NA	NA	False	NA	NA	NA	29692687	29707494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
Isoform_106315_8	chr2	+	3155	12	NIC	ENSMUSG00000059316.3	novel	4054	13	NA	NA	43	-1071	intron_retention	FALSE	canonical	3	138	junction_1	13.7396091467018	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGCCTGACAGCCTGGC	NA	False	NA	24	True	AATAAA	-16	NA	29692688	29706463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
Isoform_106319_21	chr2	+	1291	6	FSM	ENSMUSG00000069020.10	ENSMUST00000147325.2	681	6	31	-641	-3	-2	multi-exon	FALSE	canonical	3	23	junction_3	146.238708965855	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	12	True	AATAAA	-14	NA	29717403	29734074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732473_29732559_29732732_29732782_29733114
Isoform_106320_23	chr2	+	2158	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	32	6	13	-6	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCATTTTTGTTGTTGTT	NA	False	NA	8	True	AATAAA	-18	NA	29717385	29735008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
Isoform_106321_313	chr2	+	1205	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	51	940	-2	-2	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	12	True	AATAAA	-14	NA	29717404	29734074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
Isoform_106322_6	chr2	+	1311	5	NNC	ENSMUSG00000069020.10	novel	2196	5	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	141.749779541275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	12	True	AATAAA	-14	NA	29717385	29734074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733027
Isoform_106323_8	chr2	+	1305	6	NNC	ENSMUSG00000069020.10	novel	681	6	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	146.967207226646	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTTGTTTACTAGCCTT	NA	False	NA	11	True	AATAAA	-13	NA	29717385	29734073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_29717448_29722703_29722775_29731413_29731496_29732476_29732559_29732732_29732782_29733114
Isoform_106324_5	chr2	+	1129	4	FSM	ENSMUSG00000069020.10	ENSMUST00000156944.8	497	4	55	-687	2	-3	multi-exon	FALSE	canonical	1	2	junction_1	149.455307329278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTTGTTTACTAGCCTT	NA	False	NA	11	True	AATAAA	-13	NA	29717408	29734073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29717448_29731413_29731496_29732732_29732782_29733114
Isoform_106329_9	chr2	+	2671	12	NIC	ENSMUSG00000039787.14	novel	599	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	6.67547627297666	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACAGCTGAGCCTCTTT	NA	False	NA	19	True	AATAAA	-30	NA	29759169	29772852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29759358_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
Isoform_106330_67	chr2	+	2690	12	FSM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	25	0	-25	0	multi-exon	FALSE	canonical	2	9	junction_10	4.78288961380578	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACAGCTGAGCCTCTTT	NA	False	NA	19	True	AATAAA	-30	NA	29759530	29772852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
Isoform_106334_47	chr2	+	3690	21	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	276.935913164039	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6640	False	NA	14	True	AATAAA	-14	NA	29779243	29821758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_106338_55	chr2	+	3747	21	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	275.689789437331	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6640	False	NA	14	True	AATAAA	-14	NA	29779243	29821758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_10635_9	chr10	+	2040	1	NIC	ENSMUSG00000025408.16	novel	890	4	NA	NA	3	-1746	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	127126665	127128705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127126700_127128700
Isoform_106355_91	chr2	+	3755	21	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	2	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	300.030898408814	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7221	False	NA	14	True	AATAAA	-14	NA	29779824	29821758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_106356_229	chr2	+	2251	17	NIC	ENSMUSG00000026790.20	novel	2305	17	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	172.1394783308	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCGTGTTGCACAAA	7221	False	NA	11	True	AATAAA	-15	NA	29779824	29812549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
Isoform_106358_1001	chr2	+	3741	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	193.045616370846	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7232	False	NA	14	True	AATAAA	-14	NA	29779835	29821758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_106368_32	chr2	+	2311	17	ISM	ENSMUSG00000026790.20	ENSMUST00000113759.9	3807	21	-4	9208	2	1	5prime_fragment	FALSE	non_canonical	0	0	junction_8	316.895660075994	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCGTGTTGCACAAA	7221	False	NA	11	True	AATAAA	-15	NA	29779824	29812549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
Isoform_106369_73	chr2	+	3800	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113759.9	3807	21	8	-1	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	298.874656001475	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7233	False	NA	14	True	AATAAA	-14	NA	29779836	29821758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_106371_258	chr2	+	2306	17	FSM	ENSMUSG00000026790.20	ENSMUST00000113755.8	2305	17	-3	2	0	1	multi-exon	FALSE	canonical	3	577	junction_4	168.994082736645	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCGTGTTGCACAAA	7223	False	NA	11	True	AATAAA	-15	NA	29779826	29812549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
Isoform_106375_70	chr2	+	3845	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	-18	-1	-8	0	multi-exon	FALSE	canonical	3	577	junction_4	191.01803579767	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7185	False	NA	14	True	AATAAA	-14	NA	29779788	29821758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_10638_177	chr10	-	192	1	Intergenic	novelGene_1239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTTTTTTTCGAGA	NA	False	NA	-5	True	NA	NA	NA	127150993	127150801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_127150800_127151000
Isoform_106383_46	chr2	+	3704	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113757.8	3082	21	29	-651	-1	0	multi-exon	FALSE	canonical	3	101	junction_2	283.670455810964	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7232	False	NA	14	True	AATAAA	-14	NA	29779835	29821758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_106386_63	chr2	+	3768	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	101	junction_2	282.415381132119	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7223	False	NA	12	True	AATAAA	-12	NA	29779826	29821756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_106389_69	chr2	+	2098	16	NIC	ENSMUSG00000026790.20	novel	2364	17	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	278.954476572791	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCGTGTTGCACAAA	7220	False	NA	11	True	AATAAA	-15	NA	29779823	29812549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
Isoform_106390_223	chr2	+	3599	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	269.578043114865	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7220	False	NA	14	True	AATAAA	-14	NA	29779823	29821758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_106395_64	chr2	+	2154	16	FSM	ENSMUSG00000026790.20	ENSMUST00000113767.8	2249	16	93	2	2	1	multi-exon	FALSE	canonical	3	233	junction_2	277.041625432393	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCGTGTTGCACAAA	7221	False	NA	11	True	AATAAA	-15	NA	29779824	29812549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
Isoform_106396_202	chr2	+	3655	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	268.155761574078	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7221	False	NA	14	True	AATAAA	-14	NA	29779824	29821758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_10640_10	chr10	-	160	1	Intergenic	novelGene_1240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127201231	127201071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_127201100_127201200
Isoform_106435_640	chr2	+	3056	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	31	943	29	-943	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTGGTTACCTCAATA	NA	False	NA	16	True	AATAAA	-26	NA	29825468	29849440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
Isoform_106445_16	chr2	+	3580	15	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	28	-949	intron_retention	FALSE	canonical	3	458	junction_8	45.7078678530674	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATATGTGGTTACC	NA	False	NA	10	True	AATAAA	-20	NA	29825467	29849434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29825611_29826021_29826250_29828506_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
Isoform_106450_39	chr2	+	7882	56	FSM	ENSMUSG00000057738.15	ENSMUST00000095083.11	7883	56	-2	3	1	0	multi-exon	FALSE	canonical	3	62	junction_22	102.057131949797	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	False	NA	18	True	AATAAA	-18	NA	29855689	29921460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
Isoform_106451_7	chr2	+	8158	56	FSM	ENSMUSG00000057738.15	ENSMUST00000095083.11	7883	56	-278	3	-158	0	multi-exon	FALSE	canonical	3	62	junction_22	102.057131949797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	False	NA	18	True	AATAAA	-18	NA	29855413	29921460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
Isoform_106453_9	chr2	+	7838	56	FSM	ENSMUSG00000057738.15	ENSMUST00000113717.8	7958	56	118	2	1	1	multi-exon	FALSE	canonical	3	11	junction_36	107.955276935321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTTGCTCCTCTTTAT	NA	False	NA	19	True	AATAAA	-19	NA	29855689	29921461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
Isoform_106454_146	chr2	+	7822	55	FSM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	-5	3	1	0	multi-exon	FALSE	canonical	3	215	junction_7	89.7303917849273	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	False	NA	18	True	AATAAA	-18	NA	29855689	29921460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
Isoform_106457_21	chr2	+	8107	55	FSM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	-290	3	-167	0	multi-exon	FALSE	canonical	3	215	junction_7	89.7303917849273	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	False	NA	18	True	AATAAA	-18	NA	29855404	29921460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
Isoform_106458_5	chr2	+	8178	55	FSM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	-358	0	-235	0	multi-exon	TRUE	canonical	3	215	junction_7	89.7303917849273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855336	29921463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
Isoform_10648_32	chr10	-	172	1	Intergenic	novelGene_1241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127406801	127406629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_127406600_127406800
Isoform_10651_4	chr10	+	267	1	Intergenic	novelGene_1242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTCCTCCTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	127465551	127465818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_127465600_127465800
Isoform_10652_4	chr10	+	250	1	Intergenic	novelGene_1243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATACAAACAGAAAACGGG	2547	False	NA	NA	False	NA	NA	NA	127474379	127474629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_127474400_127474600
Isoform_106526_8615	chr2	+	2567	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	248	9	248	-9	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	8615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGACTGGGGTCATT	NA	False	NA	10	True	AATAAA	-15	NA	29952112	29962580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
Isoform_10653_9	chr10	+	177	1	Intergenic	novelGene_1244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGAATATACAGG	4612	False	NA	NA	False	NA	NA	NA	127492433	127492610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_127492400_127492600
Isoform_10655_3	chr10	+	1535	1	Genic_Genomic	ENSMUSG00000040195.12	novel	NA	NA	NA	NA	-11	9736	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAATAAGCAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	127512921	127514456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_127512900_127514500
Isoform_106559_3186	chr2	+	2820	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	11	3	11	-3	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	3186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGGGTCATTCTCCTT	NA	False	NA	16	True	AATAAA	-21	NA	29956478	29962586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
Isoform_10656_72	chr10	+	176	1	Intergenic	novelGene_1245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTCTTTCCCATGA	1730	False	NA	NA	False	NA	NA	NA	127517513	127517689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_127517500_127517700
Isoform_106560_1282	chr2	+	2061	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	-11	784	-11	364	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACCTGATGCTTTTCTG	NA	False	NA	14	True	AATAAA	-16	NA	29956456	29961805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
Isoform_106622_301	chr2	+	2979	22	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	19.7860437769826	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGGTTGTGTAGTGTCT	1362	False	NA	22	True	AATAAA	-24	NA	29967739	29981032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
Isoform_106623_10	chr2	+	3040	22	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-16	-1	combination_of_known_junctions	TRUE	canonical	3	77	junction_7	19.7860437769826	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGTTGTGTAGTGTCTA	1302	False	NA	23	True	AATAAA	-25	NA	29967679	29981033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
Isoform_106624_21	chr2	+	3482	21	FSM	ENSMUSG00000026785.15	ENSMUST00000148650.8	3460	21	-15	-7	-15	1	multi-exon	FALSE	canonical	3	77	junction_6	20.1955440629858	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGGTTGTGTAGTGTCT	1362	False	NA	22	True	AATAAA	-24	NA	29967739	29981032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
Isoform_106625_7	chr2	+	3565	20	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-15	1	intron_retention	FALSE	canonical	3	77	junction_6	20.0504902848988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1362	False	NA	25	True	AATAAA	-27	NA	29967739	29981035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
Isoform_106627_6	chr2	+	3665	14	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	1	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	5.87845328447471	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCGTGTCGGTGCTGTG	2743	False	NA	14	True	AATAAA	-13	NA	30023803	30042019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_30023925_30024808_30024883_30025420_30025565_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711_30040362_30040383
Isoform_106628_3	chr2	+	2316	7	ISM	ENSMUSG00000039678.13	ENSMUST00000044556.12	3595	12	75	7888	0	1601	5prime_fragment	FALSE	canonical	3	10	junction_6	2.80871659105879	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGGGCCC	2772	False	NA	NA	False	NA	NA	NA	30023832	30034137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273
Isoform_106629_49	chr2	+	3511	13	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	7	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	5.73488351136175	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCGTGTCGGTGCTGTG	2749	False	NA	14	True	AATAAA	-13	NA	30023809	30042019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711_30040358_30040383
Isoform_106631_477	chr2	+	1016	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	20	27	20	-27	multi-exon	FALSE	canonical	3	314	junction_1	35	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACTTGACCATCTCTAC	NA	False	NA	7	True	ATTAAA	-19	NA	30061524	30064054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30062079_30062853_30062964_30063702
Isoform_106635_10	chr2	+	1794	2	NIC	ENSMUSG00000015337.6	novel	1063	3	NA	NA	15	-29	intron_retention	FALSE	canonical	3	384	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGACTTGACCATCTCT	NA	False	NA	5	True	ATTAAA	-17	NA	30061519	30064052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_30062964_30063702
Isoform_106636_153	chr2	+	4326	4	FSM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	-25	0	-18	0	multi-exon	FALSE	canonical	3	48	junction_3	22.6028513442196	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	7	True	AATAAA	-15	NA	30127708	30153802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30127818_30130580_30130690_30145179_30147345_30151859
Isoform_106639_8	chr2	+	1297	12	FSM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	21	7	7	1	multi-exon	FALSE	canonical	2	23	junction_1	18.5338644710542	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATTTTATATGTACG	9938	False	NA	NA	False	AATAAA	-10	NA	30156753	30172153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30156803_30156874_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
Isoform_106640_39	chr2	+	1259	11	ISM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	131	7	1	1	3prime_fragment	FALSE	canonical	2	39	junction_2	15.9185426468631	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATTTTATATGTACG	NA	False	NA	NA	False	AATAAA	-10	NA	30156863	30172153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
Isoform_106646_1907	chr2	+	5691	44	FSM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	16	3	-4	-3	multi-exon	TRUE	canonical	3	896	junction_14	107.189702087653	1907	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4864	False	NA	15	True	ATTAAA	-16	NA	30176424	30234275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
Isoform_10666_71	chr10	+	175	1	Intergenic	novelGene_1246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGATCTGGTTCA	NA	False	NA	NA	False	NA	NA	NA	127817190	127817365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_127817200_127817400
Isoform_10667_6	chr10	+	183	1	Intergenic	novelGene_743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	18232819	18233002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_18232800_18233000
Isoform_10669_20	chr10	+	172	1	Intergenic	novelGene_1247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	127829151	127829323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_127829200_127829300
Isoform_10670_22	chr10	-	170	1	Intergenic	novelGene_1248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTTAAAGGAATGATT	NA	False	NA	NA	False	NA	NA	NA	127840812	127840642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_127840600_127840800
Isoform_106710_130	chr2	+	3368	16	FSM	ENSMUSG00000026858.19	ENSMUST00000077977.14	3381	16	10	3	-2	-1	multi-exon	TRUE	canonical	3	32	junction_1	8.28385310240484	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTCTGTGTCTTGCTG	NA	False	NA	3	True	GATAAA	-13	NA	30254254	30275530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
Isoform_106711_5	chr2	+	3251	15	NIC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	15.3609629800175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	4	True	GATAAA	-14	NA	30254255	30275531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273940
Isoform_106717_1502	chr2	+	2072	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	177	2	1	0	multi-exon	FALSE	canonical	3	287	junction_6	27.7995742149158	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282442	30290539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
Isoform_106718_60	chr2	+	2224	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	25	2	25	0	multi-exon	FALSE	canonical	3	287	junction_6	27.7995742149158	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282290	30290539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
Isoform_106720_21	chr2	+	2409	7	NIC	ENSMUSG00000026856.15	novel	2251	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	306	junction_4	23.4354906546081	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGCATACATTACTTG	NA	False	NA	9	True	AATAAA	-16	NA	30282427	30290541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287570_30289153
Isoform_106721_19	chr2	+	1943	7	FSM	ENSMUSG00000026856.15	ENSMUST00000113612.10	1958	7	15	0	1	0	multi-exon	FALSE	canonical	3	5	junction_5	126.441027096957	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282442	30290539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287479_30287570_30289153
Isoform_106725_41	chr2	+	2251	7	NIC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	287	junction_5	28.1706111636459	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282442	30290539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286543_30287030_30287160_30287479_30287570_30289153
Isoform_106732_55	chr2	+	2274	9	NNC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	141.368700124886	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282442	30290539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_30282525_30283663_30283866_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
Isoform_106736_3339	chr2	+	2567	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	19	0	19	0	multi-exon	TRUE	canonical	3	440	junction_4	51.3501655905104	3339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306069	30337817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
Isoform_10674_5	chr10	-	171	1	Intergenic	novelGene_1249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	127854822	127854651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_127854700_127854800
Isoform_10675_22	chr10	-	176	1	Intergenic	novelGene_744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	18257611	18257435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_18257400_18257600
Isoform_106756_80	chr2	+	1177	4	FSM	ENSMUSG00000026857.10	ENSMUST00000138889.8	1192	4	31	-16	15	0	multi-exon	FALSE	canonical	3	90	junction_2	216.499422632025	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGGATGTATGT	NA	False	NA	27	True	AATAAA	-33	NA	30697983	30713045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30698096_30709640_30709781_30710460_30710714_30712373
Isoform_106758_589	chr2	+	1241	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	142	4	11	-4	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTCTGTGTGTGGATGT	NA	False	NA	23	True	AATAAA	-29	NA	30697979	30713041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
Isoform_106759_145	chr2	+	1259	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	115	13	0	3	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCAGGCAGTCTGTG	NA	False	NA	14	True	AATAAA	-20	NA	30697952	30713032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
Isoform_106760_9	chr2	+	1859	3	NIC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	2	5	intron_retention	FALSE	canonical	3	540	junction_2	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAGGCAGTCTGTGTG	NA	False	NA	16	True	AATAAA	-22	NA	30697970	30713034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_30698096_30709640_30710714_30712373
Isoform_106767_20	chr2	+	1203	4	FSM	ENSMUSG00000039476.14	ENSMUST00000041659.7	1441	4	236	2	-149	-2	multi-exon	FALSE	canonical	2	7	junction_1	3.55902608401044	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACGAGGCTTCAGAAGGG	NA	False	NA	NA	False	AATAAA	-17	NA	30735306	30771261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30735694_30768421_30768604_30769503_30769683_30770806
Isoform_106768_25	chr2	+	3038	5	NIC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	43.5918570377542	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTGAGCTTTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	30842980	30849026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_30843236_30843763_30844030_30845779_30845966_30846459_30846588_30846823
Isoform_10677_5	chr10	-	166	1	Intergenic	novelGene_1250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCCGGGCGTGGTGGC	572	False	NA	NA	False	NA	NA	NA	127888147	127887981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_127888000_127888100
Isoform_106772_157	chr2	+	2987	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	51	1	19	-1	multi-exon	FALSE	canonical	1	21	junction_2	34.4990941910074	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTGAGCTTTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	30843021	30849026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
Isoform_106778_13	chr2	+	4672	6	NNC	ENSMUSG00000026848.15	novel	2809	5	NA	NA	20	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	49.3177452850391	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTGAGCTTTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	30843022	30849026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_30843236_30843763_30844549_30844573_30845478_30845526_30845966_30846459_30846588_30846823
Isoform_10678_3	chr10	-	950	1	Intergenic	novelGene_1251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127900342	127899392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_127899400_127900300
Isoform_106781_8	chr2	+	3515	4	FSM	ENSMUSG00000026848.15	ENSMUST00000155213.8	1324	4	-162	-2029	19	-1	multi-exon	FALSE	canonical	1	21	junction_1	37.4788829431544	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTGAGCTTTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	30843021	30849026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30844030_30845789_30845966_30846459_30846588_30846823
Isoform_106784_3	chr2	+	3324	26	NNC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	27	332	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	12.9128772936166	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGTCATCGCTGTGT	NA	False	NA	NA	False	AATATA	-11	NA	30872317	30911725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_30872411_30873031_30873169_30886059_30886159_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
Isoform_106785_3	chr2	+	981	4	ISM	ENSMUSG00000026854.17	ENSMUST00000061544.11	1360	10	6	6781	6	733	5prime_fragment	FALSE	canonical	3	19	junction_1	5.35412613473634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30872380	30890823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068
Isoform_106786_31	chr2	+	4052	25	FSM	ENSMUSG00000026854.17	ENSMUST00000102849.11	5088	25	91	945	7	-941	multi-exon	FALSE	canonical	1	7	junction_21	9.09889721645187	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCTTGTACTGTGACAC	NA	False	NA	20	True	AATAAA	-20	NA	30872381	30912653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
Isoform_106787_14	chr2	+	4115	25	FSM	ENSMUSG00000026854.17	ENSMUST00000102849.11	5088	25	28	945	-27	-941	multi-exon	FALSE	canonical	1	7	junction_21	9.09889721645187	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCTTGTACTGTGACAC	NA	False	NA	20	True	AATAAA	-20	NA	30872318	30912653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
Isoform_106790_17	chr2	+	1551	14	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	18	26662	1	0	5prime_fragment	FALSE	canonical	2	275	junction_2	57.7895590577976	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTCTTTTTTTTTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	31042345	31082125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858
Isoform_106793_10	chr2	+	2105	16	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	28	8972	-7	-259	5prime_fragment	FALSE	canonical	1	139	junction_14	92.4117356664666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAATAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31042355	31099815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078
Isoform_106794_358	chr2	+	3878	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	29	2227	-6	1982	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAGTGTTCAACTCTG	NA	False	NA	18	True	AATAAA	-31	NA	31042356	31106560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
Isoform_106795_448	chr2	+	1932	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	29	4173	-6	36	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTAATTGGGAGCCTG	NA	False	NA	11	True	AGTAAA	-19	NA	31042356	31104614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
Isoform_106797_24	chr2	+	6103	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	29	2	-6	-2	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACAGTAGCCCCACCTG	NA	False	NA	13	True	ATTAAA	-28	NA	31042356	31108785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
Isoform_106799_33	chr2	+	5824	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	-5	315	-5	-315	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGCTTGTGTCTGTGGT	NA	False	NA	14	True	AATAAA	-10	NA	31042322	31108472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
Isoform_106808_10	chr2	+	2350	14	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	6	-1633	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_13	125.749539742944	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	31042333	31080492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31079438
Isoform_10681_20	chr10	-	773	1	Antisense	novelGene_ENSMUSG00000071072.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGACAACTGGGTTAGAG	NA	False	NA	NA	False	NA	NA	NA	127912861	127912088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_127912100_127912900
Isoform_106811_46	chr2	+	4145	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	-15	523	-15	-523	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACAGTTGGTCCCATC	NA	False	NA	1	True	AATAAA	-41	NA	31135819	31185478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
Isoform_106814_9	chr2	+	4274	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	-138	517	-138	-517	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGGTCCCATCTTCTGT	NA	False	NA	7	True	AATAAA	-19	NA	31135696	31185484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
Isoform_106815_6	chr2	+	4668	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTGTGAGCCTGGT	NA	False	NA	NA	False	ATTAAA	-22	NA	31135819	31186001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
Isoform_106817_3	chr2	+	4813	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	-160	0	-160	0	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTGTGAGCCTGGT	NA	False	NA	NA	False	ATTAAA	-22	NA	31135674	31186001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
Isoform_106818_6	chr2	+	2461	13	FSM	ENSMUSG00000055632.19	ENSMUST00000142448.8	2495	13	35	-1	35	0	multi-exon	FALSE	canonical	1	1	junction_3	9.34931667140557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTCTTTGCTGAGTT	NA	False	NA	NA	False	TATAAA	-20	NA	31336781	31350750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31336888_31340819_31340970_31342821_31342960_31343054_31343177_31343394_31343633_31344639_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
Isoform_106819_6	chr2	+	1823	8	ISM	ENSMUSG00000055632.19	ENSMUST00000142448.8	2495	13	7777	-1	-196	0	3prime_fragment	FALSE	canonical	2	7	junction_6	7.07106781186548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTCTTTGCTGAGTT	NA	False	NA	NA	False	TATAAA	-20	NA	31344523	31350750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
Isoform_106821_20	chr2	+	2742	6	NIC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	-208	0	intron_retention	FALSE	canonical	2	13	junction_2	4.8	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTCTTTGCTGAGTT	NA	False	NA	NA	False	TATAAA	-20	NA	31344511	31350750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31349220_31350061
Isoform_106822_21	chr2	+	2712	6	NIC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	-178	0	intron_retention	FALSE	canonical	2	13	junction_2	4.8	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTCTTTGCTGAGTT	NA	False	NA	NA	False	TATAAA	-20	NA	31344541	31350750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31349220_31350061
Isoform_106823_5	chr2	+	2577	5	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-174	-1	intron_retention	FALSE	canonical	0	0	junction_3	9.54921462739214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGATGTCTTTGCTGAG	NA	False	NA	NA	False	TATAAA	-18	NA	31344545	31350748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31347744_31349220_31350061
Isoform_106824_4	chr2	+	1243	5	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-191	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.54921462739214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTTGATGTCTTTGCT	NA	False	NA	NA	False	TATAAA	-15	NA	31344528	31350745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31349092_31349220_31350061
Isoform_106825_4	chr2	+	1004	3	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-208	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCTTTGCTGAGTTA	NA	False	NA	NA	False	TATAAA	-21	NA	31344511	31350751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31344703_31344816_31344940_31350061
Isoform_106828_6605	chr2	+	1599	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	95	2	95	-2	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	6605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31360313	31410682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
Isoform_106830_205	chr2	+	1693	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	1	2	1	-2	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31360219	31410682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
Isoform_106835_81	chr2	+	1469	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	95	0	combination_of_known_splicesites	FALSE	canonical	3	195	junction_12	721.33651817233	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	False	NA	27	True	ATTAAA	-22	NA	31360313	31410684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31404690_31404848_31408737_31408804_31410383
Isoform_106860_45	chr2	+	3807	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	-158	-1	8	0	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	501	False	NA	30	True	AATAAA	-31	NA	31462670	31507532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
Isoform_106861_179	chr2	+	3674	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	-23	-3	2	2	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTCTGTTTTGTTTGCT	636	False	NA	32	True	AATAAA	-33	NA	31462805	31507534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
Isoform_106867_126	chr2	+	3246	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	16	6	16	0	multi-exon	TRUE	canonical	3	465	junction_18	67.3624112131124	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	509	False	NA	30	True	AATAAA	-31	NA	31462678	31507532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
Isoform_106868_422	chr2	+	3119	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	143	6	2	0	multi-exon	FALSE	canonical	3	465	junction_18	67.3624112131124	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	636	False	NA	30	True	AATAAA	-31	NA	31462805	31507532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
Isoform_106878_130	chr2	+	3174	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	8	0	intron_retention	FALSE	canonical	3	154	junction_18	127.170586318894	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	642	False	NA	30	True	AATAAA	-31	NA	31462811	31507532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
Isoform_106880_24	chr2	+	3313	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	16	0	intron_retention	FALSE	canonical	3	154	junction_18	127.170586318894	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	509	False	NA	36	True	AATAAA	-37	NA	31462678	31507538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
Isoform_106883_34	chr2	+	3013	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	48	junction_16	158.982817726256	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	670	False	NA	30	True	AATAAA	-31	NA	31462839	31507532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505638_31506190
Isoform_106891_30	chr2	+	3117	19	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	2	1	intron_retention	FALSE	canonical	3	64	junction_2	150.483295492298	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTCTGTTTTGTTTGC	636	False	NA	31	True	AATAAA	-32	NA	31462805	31507533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31462966_31473166_31473273_31482477_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
Isoform_10691_12	chr10	+	178	1	Intergenic	novelGene_1252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAAACAAGGTG	NA	False	NA	NA	False	NA	NA	NA	127916493	127916671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_127916500_127916700
Isoform_106911_560	chr2	+	1670	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	17	-1	-2	1	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGAGTCTCACCGCGTG	NA	False	NA	NA	False	AATAAA	-17	NA	31560743	31571362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
Isoform_106915_32	chr2	+	1897	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	17	-228	-2	228	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGTTTCTGATGCTC	NA	False	NA	NA	False	AATAAA	-12	NA	31560743	31571589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
Isoform_106928_99	chr2	+	6336	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	-13	4	1	-4	multi-exon	FALSE	canonical	3	69	junction_1	36.9031163995671	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	5741	False	NA	16	True	AATAAA	-17	NA	31578549	31693549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
Isoform_106929_11	chr2	+	6551	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	-225	1	-50	-1	multi-exon	FALSE	canonical	3	69	junction_1	36.9031163995671	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCTTGGTCTGTGATT	5529	False	NA	19	True	AATAAA	-20	NA	31578337	31693552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
Isoform_106934_112	chr2	+	5105	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	3	686	3	0	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGGTCTGTGATTC	NA	False	NA	20	True	AATAAA	-21	NA	31649957	31693553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
Isoform_106935_117	chr2	+	5065	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	41	688	41	-2	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTGCTTGGTCTGTGAT	NA	False	NA	18	True	AATAAA	-19	NA	31649995	31693551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
Isoform_106944_30	chr2	+	1341	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	173	1603	-22	501	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTCCATGTGTGCT	NA	False	NA	14	True	NA	NA	NA	31840323	31861851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
Isoform_106946_15	chr2	+	2994	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	123	0	-12	0	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCTTTGTGTTTCTT	NA	False	NA	4	True	AATAAA	-14	NA	31840273	31863454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
Isoform_106947_3	chr2	+	3052	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	65	0	65	0	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCTTTGTGTTTCTT	NA	False	NA	4	True	AATAAA	-14	NA	31840215	31863454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
Isoform_106949_3	chr2	+	2953	5	FSM	ENSMUSG00000001864.14	ENSMUST00000128271.8	519	5	-20	-2414	-20	-4	multi-exon	FALSE	canonical	0	0	junction_1	13.8270568090248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCAGTGTCTTTGTGTT	NA	False	NA	0	True	AATAAA	-10	NA	31850339	31863450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31850485_31852226_31852294_31855082_31855125_31859641_31859805_31860914
Isoform_106951_20	chr2	+	978	7	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	-19	69145	-19	3270	5prime_fragment	FALSE	canonical	3	103	junction_4	13.4039795085887	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATGTGAAAGATTAT	NA	False	NA	9	True	NA	NA	NA	31864428	31873238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134
Isoform_106952_8	chr2	+	2639	15	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	5	junction_14	34.0507574311153	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	31864454	31888710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31888214
Isoform_106954_9	chr2	+	4729	27	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	7	20649	7	0	intron_retention	FALSE	canonical	3	95	junction_11	15.0262098430882	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATTTTTTTAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	31864454	31921734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718
Isoform_106955_3	chr2	+	4255	28	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	27	20651	-23	-2	5prime_fragment	FALSE	canonical	3	95	junction_11	15.9028256239509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAATTTTTTTAAAAGA	NA	False	NA	NA	False	NA	NA	NA	31864474	31921732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261
Isoform_106956_131	chr2	+	6598	36	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	7	1	intron_retention	FALSE	canonical	3	95	junction_11	21.2761052136246	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATCTGGGTATTTATTT	NA	False	NA	29	True	ATTAAA	-23	NA	31864454	31942380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
Isoform_106957_6	chr2	+	7425	36	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-1	333	intron_retention	TRUE	canonical	3	95	junction_11	21.2761052136246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACCTTGCTAAGATGCT	NA	False	NA	NA	False	NA	NA	NA	31864446	31943199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
Isoform_106958_36	chr2	+	6588	36	FSM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	17	0	17	0	multi-exon	FALSE	canonical	3	26	junction_30	27.3468425219141	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	32	True	ATTAAA	-26	NA	31864464	31942383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929334_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
Isoform_106968_21	chr2	+	1924	2	FSM	ENSMUSG00000051373.6	ENSMUST00000057423.6	1947	2	12	11	12	1	multi-exon	FALSE	canonical	2	5	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGCATCCTTGTCCTG	NA	False	NA	NA	False	AATACA	-11	NA	31985551	32000821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_31986275_31999620
Isoform_10697_394	chr10	-	178	1	Intergenic	novelGene_1253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	127935686	127935508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_127935500_127935700
Isoform_106971_6	chr2	+	2314	9	ISM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	-1	38609	-1	-23228	5prime_fragment	FALSE	canonical	3	374	junction_1	33.800656428537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	6649	False	NA	NA	False	NA	NA	NA	32041092	32085940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868
Isoform_106975_21	chr2	+	6885	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-11	1621	combination_of_known_junctions	FALSE	canonical	3	120	junction_19	92.1634357480714	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTATATGTATTGAT	6705	False	NA	15	True	AATAAA	-17	NA	32041148	32122795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
Isoform_106976_17	chr2	+	8652	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_19	92.1634357480714	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6692	False	NA	24	True	AATAAA	-40	NA	32041135	32124549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
Isoform_106978_11	chr2	+	6798	30	FSM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	58	1756	-8	1619	multi-exon	FALSE	canonical	3	120	junction_19	84.1956133534682	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATTTATATGTATTG	6708	False	NA	13	True	AATAAA	-15	NA	32041151	32122793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
Isoform_106979_11	chr2	+	8593	30	FSM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	18	1	18	-1	multi-exon	FALSE	canonical	3	120	junction_19	84.1956133534682	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	6668	False	NA	23	True	AATAAA	-39	NA	32041111	32124548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
Isoform_106981_49	chr2	+	6959	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-17	1626	combination_of_known_junctions	FALSE	canonical	3	239	junction_29	73.1573342567617	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATGTATTGATGTTGT	6633	False	NA	20	True	AATAAA	-22	NA	32041076	32122800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
Isoform_106984_42	chr2	+	8684	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	3	239	junction_29	73.1573342567617	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAACATGCTTTCTCAGG	6639	False	NA	6	True	AATAAA	-22	NA	32041082	32124531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
Isoform_106990_6	chr2	+	6934	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-81	1619	combination_of_known_junctions	TRUE	canonical	3	283	junction_29	60.7166476024171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATTTATATGTATTG	6569	False	NA	13	True	AATAAA	-15	NA	32041012	32122793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
Isoform_106991_77	chr2	+	8591	30	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	283	junction_29	60.7166476024171	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6668	False	NA	24	True	AATAAA	-40	NA	32041111	32124549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
Isoform_106995_8	chr2	+	2778	8	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	31	-23228	intron_retention	FALSE	canonical	3	374	junction_1	35.6479383724232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	6681	False	NA	NA	False	NA	NA	NA	32041124	32085940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32041304_32072469_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868
Isoform_107026_387	chr2	+	2835	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	82	1	0	-1	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTTATTTATTG	NA	False	NA	16	True	AATAAA	-17	NA	32126683	32145016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
Isoform_107027_35	chr2	+	2915	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	2	1	2	-1	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTTATTTATTG	NA	False	NA	16	True	AATAAA	-17	NA	32126603	32145016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
Isoform_107029_24	chr2	+	2741	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	38.3467367871403	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTTATTTATTG	NA	False	NA	16	True	AATAAA	-17	NA	32126684	32145016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
Isoform_107030_8	chr2	+	2772	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	38.3467367871403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTTATGTTATTTAT	NA	False	NA	14	True	AATAAA	-15	NA	32126651	32145014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
Isoform_107031_6	chr2	+	3266	20	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	37.3366803670469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTTATGTTATTTA	NA	False	NA	13	True	AATAAA	-14	NA	32126710	32145013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32127215_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
Isoform_107036_134	chr2	+	4353	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	-2	10	-2	1	multi-exon	FALSE	canonical	3	80	junction_7	19.1852443299532	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGGGCCTAGGGTGT	NA	False	NA	20	True	AATAAA	-13	NA	32178262	32197923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
Isoform_107041_40	chr2	+	4238	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	28.9025842270203	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGGGCCTAGGGTGT	NA	False	NA	20	True	AATAAA	-13	NA	32178296	32197923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
Isoform_107043_4	chr2	+	4201	24	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	30.2323703880735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178296	32197925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
Isoform_107044_4	chr2	+	5551	23	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-11	0	intron_retention	FALSE	canonical	3	94	junction_1	15.4641681272472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178253	32197924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
Isoform_107051_3	chr2	+	2650	19	NIC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	17	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_1	29.8221580559005	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253089	32268309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32253171_32253634_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261126_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
Isoform_107053_16	chr2	+	2791	17	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	33	junction_3	18.9699598049126	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253049	32268309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
Isoform_107054_3	chr2	+	2743	17	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	9	-1	intron_retention	FALSE	canonical	3	15	junction_5	23.2647802482637	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGCAGTCCCCACCAGCA	NA	False	NA	5	True	AATAAA	-16	NA	32253081	32268308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
Isoform_107055_10	chr2	+	2572	17	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	18.9868375460475	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253049	32268309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
Isoform_107057_27	chr2	+	2717	16	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	-20	0	intron_retention	FALSE	canonical	3	47	junction_3	15.4050496771531	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253052	32268310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
Isoform_107062_6	chr2	+	2190	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	-247	3035	-247	1161	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTGGTCTGACAATGGT	6845	False	NA	17	True	AATAAA	-17	NA	32285660	32292749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
Isoform_107063_386	chr2	+	1576	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	370	3032	-174	1164	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTGACAATGGTGCT	7462	False	NA	20	True	AATAAA	-20	NA	32286277	32292752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
Isoform_107064_143	chr2	+	1611	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	335	3032	-209	1164	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTGACAATGGTGCT	7427	False	NA	20	True	AATAAA	-20	NA	32286242	32292752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
Isoform_107065_82	chr2	+	2823	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1829	-2	1829	2	multi-exon	FALSE	canonical	3	24	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACACACTCCTCTTGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	32342297	32346967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32342962_32344808
Isoform_107066_35	chr2	+	2903	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1756	-9	1756	9	multi-exon	FALSE	canonical	3	24	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGTCTTTATTGA	NA	False	NA	NA	False	ATTAAA	-27	NA	32342224	32346974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32342962_32344808
Isoform_107068_5	chr2	+	3385	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1790	-525	1790	525	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGTTATGGTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	32342258	32347490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32342962_32344808
Isoform_107069_5	chr2	+	3441	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1734	-525	1734	525	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGTTATGGTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	32342202	32347490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32342962_32344808
Isoform_107070_12	chr2	+	3848	12	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-43	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	35.533013400531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTTGTTGGTGTTTC	1539	False	NA	18	True	ATTAAA	-18	NA	32425300	32459763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32425642_32426081_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
Isoform_107072_6	chr2	+	4092	12	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	37.9482030628919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGGTGTTTCTTTTC	1535	False	NA	23	True	ATTAAA	-23	NA	32425296	32459768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32425877_32426081_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
Isoform_107073_397	chr2	+	4273	11	FSM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	-55	5	-28	1	multi-exon	FALSE	canonical	3	103	junction_7	13.8115893364956	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTTGTTGGTGTTTC	1554	False	NA	18	True	ATTAAA	-18	NA	32425315	32459763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
Isoform_107085_11	chr2	+	2405	2	ISM	ENSMUSG00000026810.13	ENSMUST00000140592.8	1412	3	16	-8	7	-8	intron_retention	FALSE	canonical	3	274	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4789	False	NA	15	True	AATAAA	-16	NA	32460885	32463583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_32460925_32461217
Isoform_107087_159	chr2	+	872	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	-11	8	-11	-8	multi-exon	FALSE	canonical	3	274	junction_1	58.5965490072202	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4762	False	NA	15	True	AATAAA	-16	NA	32460858	32463583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
Isoform_107088_6	chr2	+	1844	3	NIC	ENSMUSG00000026810.13	novel	869	4	NA	NA	8	7	intron_retention	FALSE	canonical	3	274	junction_1	59.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTCTCTCTGCCATC	4790	False	NA	14	True	AATAAA	-15	NA	32460886	32463582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32460925_32461217_32462412_32462970
Isoform_107089_31	chr2	+	1106	3	FSM	ENSMUSG00000026810.13	ENSMUST00000128039.2	655	3	39	-490	39	-8	multi-exon	FALSE	canonical	3	393	junction_2	5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4821	False	NA	15	True	AATAAA	-16	NA	32460917	32463583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32461308_32462308_32462412_32462970
Isoform_107092_9	chr2	+	2107	2	FSM	ENSMUSG00000026810.13	ENSMUST00000150419.2	851	2	-1141	-115	39	-8	multi-exon	FALSE	canonical	3	393	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4821	False	NA	15	True	AATAAA	-16	NA	32460917	32463583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32462412_32462970
Isoform_107093_34	chr2	+	3641	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-17	2	-17	-2	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTCAACCACTTCCTC	NA	False	NA	14	True	AATAAA	-16	NA	32477089	32489708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
Isoform_107094_39	chr2	+	1656	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-26	1996	-26	1	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTCTCTGTGGTAAC	NA	False	NA	8	True	NA	NA	NA	32477080	32487714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
Isoform_107096_4	chr2	+	4001	5	FSM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	-556	-619	-26	-4	multi-exon	FALSE	canonical	3	25	junction_3	5.71729831301464	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCTGTCAACCACTTCC	NA	False	NA	12	True	AATAAA	-14	NA	32477080	32489706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
Isoform_107099_44	chr2	+	2426	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095044.10	2394	7	-33	1	-18	1	multi-exon	FALSE	canonical	3	38	junction_2	28.6225435627234	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3336	False	NA	6	True	AATAAA	-15	NA	32497004	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_107101_14	chr2	+	2419	7	NNC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	34.6910971608311	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3339	False	NA	6	True	AATAAA	-15	NA	32497007	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509355
Isoform_107102_8	chr2	+	2362	6	NIC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	41.0482642751189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3309	False	NA	6	True	AATAAA	-15	NA	32496977	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32497124_32498053_32498109_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_107104_7	chr2	+	2539	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095045.9	2536	7	-2	-1	-2	1	multi-exon	FALSE	canonical	2	6	junction_2	37.4718412796714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3352	False	NA	6	True	AATAAA	-15	NA	32497020	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32497124_32498053_32498238_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_107106_46	chr2	+	2353	6	FSM	ENSMUSG00000026811.19	ENSMUST00000113290.8	2402	6	50	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_1	35.6202189774291	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3354	False	NA	6	True	AATAAA	-15	NA	32497022	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32497124_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_107108_7	chr2	+	2366	6	NNC	ENSMUSG00000026811.19	novel	2402	6	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	41.6768520884195	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3337	False	NA	6	True	AATAAA	-15	NA	32497005	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_32497124_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509355
Isoform_107110_10	chr2	+	2242	5	NIC	ENSMUSG00000026811.19	novel	2361	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	33.6191909480285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3355	False	NA	6	True	AATAAA	-15	NA	32497023	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32497124_32502235_32502416_32504792_32505181_32508508_32508617_32509351
Isoform_107112_122	chr2	+	2291	5	NIC	ENSMUSG00000026811.19	novel	2402	6	NA	NA	21	1	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	26.3569250862084	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3325	False	NA	6	True	AATAAA	-15	NA	32496993	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_32497124_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_107113_36	chr2	+	2282	5	NNC	ENSMUSG00000026811.19	novel	2402	6	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	39.7264080933577	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3330	False	NA	6	True	AATAAA	-15	NA	32496998	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_32497124_32502235_32502416_32504792_32505200_32508508_32508617_32509355
Isoform_107115_5	chr2	+	2438	5	ISM	ENSMUSG00000026811.19	ENSMUST00000081879.12	2345	6	576	-1	-3	1	3prime_fragment	FALSE	canonical	3	74	junction_1	16.299923312703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	5383	False	NA	6	True	AATAAA	-15	NA	32499051	32510817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_107117_81	chr2	+	2013	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	53	-3	52	-1	multi-exon	FALSE	canonical	3	40	junction_1	98.788775790685	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32515501	32525069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_107120_268	chr2	+	1946	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	3032	-3	79	-1	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32518480	32525069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_107121_53	chr2	+	2015	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	2963	-3	10	-1	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32518411	32525069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_107122_20	chr2	+	2163	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	2813	-1	-140	1	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGTGAGTGTATTGAA	NA	False	NA	14	True	AATAAA	-18	NA	32518261	32525067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_107127_244	chr2	+	2057	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	-18	-5	-18	-1	multi-exon	FALSE	canonical	3	94	junction_1	85.0895998345274	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32519497	32525069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_107131_13	chr2	+	2251	5	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	4087	-3	3	-1	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32519535	32525069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_107132_44	chr2	+	1993	5	ISM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	276	-3	259	1	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGTGAGTGTATTGAA	NA	False	NA	14	True	AATAAA	-18	NA	32519791	32525067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_107140_276	chr2	+	2853	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	33	536	6	4	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	588	False	NA	29	True	AATAAA	-17	NA	32536639	32572134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_107141_223	chr2	+	2934	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	-48	536	-48	4	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	507	False	NA	29	True	AATAAA	-17	NA	32536558	32572134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_107145_21	chr2	+	3406	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	19	-3	-8	3	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCAATTAGTTCCAG	574	False	NA	NA	False	AATAAA	-16	NA	32536625	32572673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_107148_138	chr2	+	2864	15	FSM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	-7	546	-7	5	multi-exon	FALSE	canonical	3	45	junction_1	47.9038684475993	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTGGGTTGTATGGG	575	False	NA	30	True	AATAAA	-18	NA	32536626	32572135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_107149_55	chr2	+	2931	15	FSM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	-75	547	-48	4	multi-exon	FALSE	canonical	3	45	junction_1	47.9038684475993	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	507	False	NA	29	True	AATAAA	-17	NA	32536558	32572134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_107153_37	chr2	+	2612	11	FSM	ENSMUSG00000059013.13	ENSMUST00000113242.5	3107	11	-23	518	-23	0	multi-exon	FALSE	canonical	1	2	junction_6	3.98622628559895	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTCCCATGAGGCCT	1522	False	NA	NA	False	AATAAA	-15	NA	32617694	32645006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32617819_32627530_32627571_32634762_32634892_32635846_32636302_32637033_32637159_32639164_32639698_32640963_32641080_32641525_32641698_32642625_32642738_32643000_32643208_32644407
Isoform_107156_449	chr2	+	1489	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	44	3	2	-1	multi-exon	FALSE	canonical	3	200	junction_1	20.9105236663265	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATTGACCAAAGTTTCT	633	False	NA	6	True	AATAAA	-17	NA	32647289	32652253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
Isoform_107158_7	chr2	+	1603	5	NNC	ENSMUSG00000009563.17	novel	1536	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	95.9853504447424	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGACCAAAGTTTCTT	646	False	NA	7	True	AATAAA	-18	NA	32647302	32652254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_32647463_32648682_32648949_32649412_32649715_32650600_32650729_32651507
Isoform_107159_35	chr2	+	1406	5	FSM	ENSMUSG00000009563.17	ENSMUST00000156617.8	915	5	22	-513	1	-1	multi-exon	FALSE	canonical	3	24	junction_1	95.4214336509361	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGACCAAAGTTTCTTA	632	False	NA	8	True	AATAAA	-19	NA	32647288	32652255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32647463_32648768_32648949_32649538_32649715_32650600_32650729_32651507
Isoform_107160_9	chr2	+	2745	4	FSM	ENSMUSG00000009563.17	ENSMUST00000149720.3	2712	4	-31	-2	0	0	multi-exon	FALSE	canonical	3	233	junction_3	10.6562449087639	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	600	False	NA	9	True	AATAAA	-20	NA	32647256	32652256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32648949_32649538_32649715_32650600_32650729_32651507
Isoform_107164_19	chr2	+	961	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	-11	2	-11	-2	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGAAGCTTCCTGTGGG	8180	False	NA	4	True	ATTAAA	-14	NA	32665786	32667607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
Isoform_107166_6	chr2	+	2025	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	-21	-1052	-21	1052	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTCTGTTCTTCCTTTGT	8170	False	NA	NA	False	NA	NA	NA	32665776	32668661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
Isoform_107167_4	chr2	+	1007	5	NNC	ENSMUSG00000053746.9	novel	952	5	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	18.6061145863396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTGGAAGCTTCCTGT	8220	False	NA	1	True	ATTAAA	-11	NA	32665826	32667604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_32665908_32666315_32666536_32666718_32666819_32666905_32667041_32667133
Isoform_107168_5	chr2	+	1144	4	FSM	ENSMUSG00000053746.9	ENSMUST00000138214.2	908	4	-90	-146	-11	-2	multi-exon	FALSE	canonical	3	42	junction_3	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGAAGCTTCCTGTGGG	8180	False	NA	4	True	ATTAAA	-14	NA	32665786	32667607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32665908_32666315_32666819_32666994_32667041_32667133
Isoform_107169_998	chr2	+	3645	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	69	0	69	0	multi-exon	FALSE	canonical	3	292	junction_12	30.0169577319103	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	8926	False	NA	19	True	AATAAA	-19	NA	32766194	32815266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
Isoform_107170_55	chr2	+	3683	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	30	1	30	-1	multi-exon	TRUE	canonical	3	292	junction_12	30.0169577319103	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTCATGTGCTGCTGG	8887	False	NA	18	True	AATAAA	-18	NA	32766155	32815265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
Isoform_107185_905	chr2	+	664	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	126	452	-35	1	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCTTGGCTGCTTTTTG	5767	False	NA	23	True	AATAAA	-22	NA	32851696	32854056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
Isoform_107186_1270	chr2	+	635	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	155	452	-6	1	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCTTGGCTGCTTTTTG	5796	False	NA	23	True	AATAAA	-22	NA	32851725	32854056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
Isoform_107195_107	chr2	+	756	7	FSM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	-26	-1	-6	1	multi-exon	FALSE	canonical	3	310	junction_1	2477.85254246943	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCTTGGCTGCTTTTTG	5796	False	NA	23	True	AATAAA	-22	NA	32851725	32854056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
Isoform_10720_9	chr10	-	169	1	Intergenic	novelGene_1254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	127972872	127972703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_127972700_127972900
Isoform_10721_7	chr10	-	236	1	Intergenic	novelGene_1255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTATGATGTTTCATTGC	5876	False	NA	NA	False	NA	NA	NA	128001732	128001496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128001500_128001700
Isoform_107210_5	chr2	+	3341	5	FSM	ENSMUSG00000004105.9	ENSMUST00000004208.7	3339	5	2	-4	2	4	multi-exon	FALSE	canonical	1	1	junction_3	1.11803398874989	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACACTGTGTGCTGCTCT	NA	False	NA	NA	False	AATAAA	-25	NA	33106082	33137733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_33106466_33118186_33119045_33132211_33132406_33133690_33133962_33136098
Isoform_107211_10	chr2	+	2050	12	NIC	ENSMUSG00000038696.15	novel	3018	11	NA	NA	31	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	61.6099433855197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGTGGTTGGTATGATGG	NA	False	NA	20	True	AATAAA	-14	NA	34296813	34513925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_34296861_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_107213_142	chr2	+	2395	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-320	1036	1	-6	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGTGGTTGGTATGATGG	NA	False	NA	20	True	AATAAA	-14	NA	34296874	34513925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_107214_129	chr2	+	3431	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-320	0	1	0	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296874	34514961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_107219_7	chr2	+	3325	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	63.4010252283037	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATATTGCTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	34296875	34514964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_107222_11	chr2	+	2069	11	FSM	ENSMUSG00000038696.15	ENSMUST00000124443.8	1630	11	1	-440	1	-4	multi-exon	FALSE	canonical	3	20	junction_1	60.6699266523374	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGGTTGGTATGATGGAC	NA	False	NA	22	True	AATAAA	-16	NA	34296874	34513927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_34297267_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_107225_22	chr2	+	1977	10	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	57.8179347628996	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGTGGTTGGTATGATGG	NA	False	NA	20	True	AATAAA	-14	NA	34296874	34513925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_34297267_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_107228_5	chr2	+	3591	13	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	73.4988662044071	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATATTGCTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	34296875	34514964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_34297267_34309119_34309278_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_10723_35	chr10	+	242	1	Intergenic	novelGene_1256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAGCACTGA	NA	False	NA	NA	False	NA	NA	NA	128004850	128005092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128004800_128005100
Isoform_107236_3856	chr2	+	2466	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	123	1083	-2	-67	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	3856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTGTGAAAAGTTTG	NA	False	NA	31	True	AATAAA	-22	NA	34662104	34666476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
Isoform_107239_522	chr2	+	2533	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	123	1016	-2	0	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	False	NA	18	True	ACTAAA	-14	NA	34662104	34666543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
Isoform_107249_208	chr2	+	2614	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-2	1	-2	-1	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCAGGTGTGTCTTTCT	NA	False	NA	17	True	ACTAAA	-13	NA	34662104	34666542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
Isoform_10725_59	chr10	+	179	1	Intergenic	novelGene_1257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACAATAAAAATTA	5553	False	NA	NA	False	NA	NA	NA	128020794	128020973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128020800_128021000
Isoform_107250_1661	chr2	+	2544	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-2	71	-2	-71	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTAATTTTTGTGAAAAG	NA	False	NA	27	True	AATAAA	-18	NA	34662104	34666472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
Isoform_10726_148	chr10	-	168	1	Intergenic	novelGene_1258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	128028101	128027933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128027900_128028100
Isoform_10728_112	chr10	+	176	1	Intergenic	novelGene_1259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATTTTTTTTAAAAAA	6753	False	NA	NA	False	NA	NA	NA	128050201	128050377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128050200_128050400
Isoform_107286_32	chr2	+	7596	44	FSM	ENSMUSG00000057110.16	ENSMUST00000028237.15	7615	44	18	1	18	-1	multi-exon	FALSE	canonical	3	34	junction_10	30.4342289721856	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGCAGGTTACCTTTATT	NA	False	NA	21	True	AATAAA	-24	NA	34999521	35068833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
Isoform_107289_52	chr2	+	2574	18	FSM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	41	-8	12	6	multi-exon	FALSE	canonical	3	7	junction_1	7.49855810822468	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGTCTCACTGCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	35146432	35197910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_35146486_35156831_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
Isoform_10729_5	chr10	+	190	1	Intergenic	novelGene_1260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAGGGAAGAAAAAAGA	2520	False	NA	NA	False	NA	NA	NA	128054825	128055015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128054800_128055000
Isoform_107290_53	chr2	+	2540	17	ISM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	10418	-5	10349	3	3prime_fragment	FALSE	canonical	3	17	junction_1	5.90517516674992	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGGTGTCTCACTGCT	5209	False	NA	NA	False	AATAAA	-20	NA	35156809	35197907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
Isoform_107291_8	chr2	+	2643	17	FSM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	10	0	10	0	multi-exon	FALSE	canonical	1	1	junction_1	8.42591797669548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCCCAGGTGTCTCACT	NA	False	NA	NA	False	AATAAA	-17	NA	35172401	35197904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_35172614_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
Isoform_107294_10	chr2	+	6414	16	ISM	ENSMUSG00000026883.18	ENSMUST00000135741.8	4128	17	10	-1	10	1	intron_retention	FALSE	canonical	3	33	junction_1	66.8343225196954	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGACTTGCCTTTCTTC	NA	False	NA	10	True	ATTAAA	-20	NA	35472861	35621005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_35473062_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_107296_12	chr2	+	6529	16	FSM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	-69	-5	-13	0	multi-exon	FALSE	canonical	3	22	junction_1	68.7589670919769	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	8453	False	NA	9	True	ATTAAA	-19	NA	35511979	35621004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_107298_8	chr2	+	5533	17	NIC	ENSMUSG00000026883.18	novel	6455	16	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	76.7872212269073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGACTTGCCTTTCTTC	8468	False	NA	10	True	ATTAAA	-20	NA	35511994	35621005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
Isoform_10730_29	chr10	-	175	1	Antisense	novelGene_ENSMUSG00000039994.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAAACACTGCAG	4119	False	NA	NA	False	NA	NA	NA	128078855	128078680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_128078700_128078900
Isoform_107303_4	chr2	+	6636	16	FSM	ENSMUSG00000026883.18	ENSMUST00000145698.8	6649	16	11	2	11	-2	multi-exon	FALSE	canonical	3	11	junction_2	77.7277299295432	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCTGACTTGCCTTTC	8477	False	NA	7	True	ATTAAA	-17	NA	35512003	35621002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_35512296_35533899_35534137_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_107305_115	chr2	+	6266	14	ISM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	39298	-5	-15	0	3prime_fragment	FALSE	canonical	3	179	junction_9	30.3936695370762	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35551346	35621004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_107306_48	chr2	+	6291	14	ISM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	39275	-7	-38	0	3prime_fragment	FALSE	canonical	3	179	junction_9	30.3936695370762	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551323	35621006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_107307_17	chr2	+	5288	15	ISM	ENSMUSG00000026883.18	ENSMUST00000112986.9	5580	17	103065	2	-19	0	3prime_fragment	FALSE	canonical	3	47	junction_14	55.3541934698165	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35551342	35621004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
Isoform_107309_13	chr2	+	6192	14	NIC	ENSMUSG00000026883.18	novel	6287	16	NA	NA	-7	0	intron_retention	FALSE	canonical	3	43	junction_9	57.3698681813714	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35551354	35621004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_107310_12	chr2	+	6235	14	NIC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-48	0	intron_retention	FALSE	canonical	3	43	junction_9	57.3698681813714	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551313	35621006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_107311_4	chr2	+	5222	15	NIC	ENSMUSG00000026883.18	novel	5580	17	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_9	70.8283711747299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35551342	35621004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
Isoform_107313_10	chr2	+	6461	14	FSM	ENSMUSG00000026883.18	ENSMUST00000065001.12	6392	14	-69	0	-69	0	multi-exon	FALSE	canonical	3	30	junction_1	58.8774677870724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	310	False	NA	9	True	ATTAAA	-19	NA	35581936	35621004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_35582423_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_107325_160	chr2	+	1290	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	275	1058	30	-1058	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAGATAGAGTGGTTT	NA	False	NA	19	True	AATAAA	-20	NA	36026675	36079601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
Isoform_107326_7	chr2	+	1558	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	9	1056	0	-1056	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGATAGAGTGGTTTGG	NA	False	NA	21	True	AATAAA	-22	NA	36026409	36079603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
Isoform_10733_8	chr10	+	202	1	Intergenic	novelGene_1261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGCCGGTTTGTGGTGGC	3737	False	NA	NA	False	NA	NA	NA	128103179	128103381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128103200_128103400
Isoform_107332_247	chr2	+	4959	26	FSM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	1	7	1	-7	multi-exon	FALSE	canonical	3	116	junction_1	34.3579743291132	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAGCATTGCTTCATAC	1546	False	NA	0	True	ATTAAA	-11	NA	37333297	37456442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
Isoform_107340_200	chr2	+	4852	26	FSM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	-20	15	2	2	multi-exon	FALSE	canonical	3	120	junction_1	33.7498088883478	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTTCATACAAAAGTAGT	NA	False	NA	9	True	ATTAAA	-20	NA	37342258	37456451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
Isoform_107344_37	chr2	+	4723	26	NIC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	-15	-5	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	48.8404094986928	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCATTGCTTCATACAA	NA	False	NA	2	True	ATTAAA	-13	NA	37342241	37456444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_37342314_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
Isoform_10735_4	chr10	-	192	1	Intergenic	novelGene_1262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACCAGCTGCCAC	NA	False	NA	NA	False	NA	NA	NA	128108833	128108641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128108600_128108800
Isoform_107350_4	chr2	+	2398	5	FSM	ENSMUSG00000000247.12	ENSMUST00000000253.6	2840	5	437	5	437	-5	multi-exon	FALSE	canonical	0	0	junction_2	2.73861278752583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGACTCAGTGCTGGTA	NA	False	NA	10	True	AATAAA	-11	NA	38241207	38259740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_38241906_38243322_38243526_38244460_38244865_38249909_38250116_38258853
Isoform_107352_4	chr2	+	2528	5	FSM	ENSMUSG00000000247.12	ENSMUST00000000253.6	2840	5	309	3	309	-3	multi-exon	FALSE	canonical	0	0	junction_2	2.73861278752583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTCAGTGCTGGTACT	NA	False	NA	12	True	AATAAA	-13	NA	38241079	38259742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_38241906_38243322_38243526_38244460_38244865_38249909_38250116_38258853
Isoform_107354_259	chr2	+	2247	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	58	8033	33	807	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGAGGAAACAGTCTG	NA	False	NA	18	True	TATAAA	-22	NA	38401712	38476585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
Isoform_107356_54	chr2	+	3183	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	33	7122	8	4	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCTCCACTGGACAATC	NA	False	NA	6	True	AATAAA	-17	NA	38401687	38477496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
Isoform_107362_5	chr2	+	1014	4	FSM	ENSMUSG00000026755.15	ENSMUST00000090993.8	752	4	-67	-195	14	195	multi-exon	FALSE	canonical	3	442	junction_1	241.831897537663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCATCGCGGTGTGTTCT	NA	False	NA	17	True	AATAAA	-19	NA	38898101	38905600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_38898337_38903128_38903200_38903734_38903912_38905069
Isoform_107364_5	chr2	+	948	3	NIC	ENSMUSG00000026755.15	novel	752	4	NA	NA	12	198	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	452.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCGCGGTGTGTTCTCTG	NA	False	NA	20	True	AATAAA	-22	NA	38898099	38905603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_38898337_38903734_38903912_38905069
Isoform_107365_73	chr2	+	992	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	-2	201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGGTGTGTTCTCTGTAT	NA	False	NA	23	True	AATAAA	-25	NA	38898150	38905606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_38898358_38903128_38903200_38903734_38903912_38905069
Isoform_107366_31	chr2	+	1054	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	-2	198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCGCGGTGTGTTCTCTG	NA	False	NA	20	True	AATAAA	-22	NA	38898085	38905603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_38898358_38903128_38903200_38903734_38903912_38905069
Isoform_107367_9	chr2	+	1340	4	NNC	ENSMUSG00000026755.15	novel	1339	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGCTTCAAAAGTCATC	NA	False	NA	8	True	AATAAA	-19	NA	38898085	38905889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_38898358_38903128_38903200_38903734_38903912_38905069
Isoform_107368_23	chr2	+	1270	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGAGGCTTCAAAAGTCA	NA	False	NA	6	True	AATAAA	-17	NA	38898153	38905887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_38898358_38903128_38903200_38903734_38903912_38905069
Isoform_107369_12	chr2	+	843	3	NIC	ENSMUSG00000086202.2	novel	635	4	NA	NA	0	13	intron_retention	FALSE	canonical	3	17	junction_1	10	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGATCTTCCTGTTGTG	NA	False	NA	NA	False	ATTAAA	-30	NA	45586616	45588472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_45586642_45586810_45587155_45587998
Isoform_107372_66	chr2	+	5630	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	53	3	53	-3	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCACATGCAGTTTT	NA	False	NA	12	True	AATAAA	-15	NA	48704173	48793278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
Isoform_107374_6	chr2	+	2941	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	-68	2813	-68	208	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAATTCACTGTGTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	48704052	48790468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
Isoform_107377_4	chr2	+	4984	11	NIC	ENSMUSG00000036792.13	novel	713	8	NA	NA	67	-1597	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.49857113690718	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGAATTTTTTATCAT	6293	False	NA	NA	False	AATAAA	-20	NA	48839601	49148973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_48840188_48908265_48908338_48976601_48976665_48989728_48989822_49008663_49008818_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
Isoform_107379_12	chr2	+	3909	14	FSM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	19	769	19	-769	multi-exon	FALSE	canonical	2	3	junction_1	7.11943751517944	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACGGCCATGCTGCATA	NA	False	NA	8	True	AATAAA	-13	NA	49341516	49441191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
Isoform_107383_3	chr2	+	3896	14	NNC	ENSMUSG00000069495.13	novel	4697	14	NA	NA	28	-769	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8.42017863729883	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACGGCCATGCTGCATA	NA	False	NA	8	True	AATAAA	-13	NA	49341525	49441191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420026_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
Isoform_107385_4	chr2	+	1663	11	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	-18	63746	-18	-19219	5prime_fragment	TRUE	canonical	3	15	junction_6	6.56962708226274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGCCCCAGCTCATTC	NA	False	NA	NA	False	ACTAAA	-18	NA	49509291	49601044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_49509800_49561763_49561855_49570176_49570251_49578664_49578770_49583705_49583755_49584011_49584068_49584779_49584868_49587991_49588117_49590512_49590618_49590968_49591118_49600731
Isoform_107386_3	chr2	+	3617	17	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	8	34337	8	4857	5prime_fragment	FALSE	canonical	3	15	junction_6	6.86021136700612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGATGGATGATGTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	49509317	49630453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_49509800_49561763_49561855_49570176_49570251_49578664_49578770_49583705_49583755_49584011_49584068_49584779_49584868_49587991_49588117_49590512_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094
Isoform_107388_13	chr2	+	6862	26	FSM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	-6	0	-6	0	multi-exon	FALSE	canonical	3	10	junction_25	6.95056832208705	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGGTGTCCTTATTT	NA	False	NA	17	True	AATAAA	-18	NA	49509303	49664790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_49509800_49561763_49561855_49570176_49570251_49578664_49578770_49583705_49583755_49584011_49584068_49584779_49584868_49587991_49588117_49590512_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
Isoform_10739_250	chr10	+	176	1	Intergenic	novelGene_1263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	128168223	128168399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128168200_128168400
Isoform_107390_6	chr2	+	2687	9	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	81066	34334	-215	4860	internal_fragment	FALSE	canonical	3	18	junction_8	5.02493781056044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGATGATGTTATTATT	NA	False	NA	NA	False	AATAAA	-20	NA	49590375	49630456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094
Isoform_107391_18	chr2	+	5905	18	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	81073	3	-208	-3	3prime_fragment	FALSE	canonical	3	10	junction_17	7.40616034613513	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTCTGGTGTCCTTA	NA	False	NA	14	True	AATAAA	-15	NA	49590382	49664787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
Isoform_107392_8	chr2	+	3508	5	FSM	ENSMUSG00000050447.16	ENSMUST00000112712.10	3495	5	-19	6	-19	0	multi-exon	FALSE	canonical	1	1	junction_4	1.73205080756888	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGCTTCTTCCTGCGAG	NA	False	NA	NA	False	AATAAA	-18	NA	49956421	50083575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_49956597_50055480_50055670_50063612_50063712_50078722_50078854_50080661
Isoform_10740_11	chr10	-	172	1	Intergenic	novelGene_1264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7979	False	NA	NA	False	NA	NA	NA	128168655	128168483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128168500_128168700
Isoform_107400_13	chr2	+	8191	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	6	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	120.947294981183	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962848	52012127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
Isoform_107401_12	chr2	+	8459	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	120.947294981183	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962846	52012393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
Isoform_10741_8	chr10	-	183	1	Intergenic	novelGene_1265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGGAAAAAAAAAAAAGAAAA	7728	False	NA	NA	False	NA	NA	NA	128168906	128168723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128168700_128168900
Isoform_107411_92	chr2	+	8486	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962843	52012393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
Isoform_107417_27	chr2	+	8407	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	144.087250696058	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962843	52012392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
Isoform_107418_29	chr2	+	8140	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	144.087250696058	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTACATACCACTGCCT	NA	False	NA	5	True	ATTAAA	-17	NA	51962843	52012125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
Isoform_107426_18	chr2	+	3290	25	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	31	-31	intron_retention	FALSE	canonical	0	0	junction_15	113.822893310909	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGATTCCATTTTGGC	NA	False	NA	15	True	ATTAAA	-38	NA	51962874	51997706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649
Isoform_107435_8	chr2	+	8779	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_15	126.478033296594	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962820	52012393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
Isoform_107438_10	chr2	+	8511	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-23	4	intron_retention	TRUE	canonical	0	0	junction_15	126.478033296594	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTACATACCACTGCCT	NA	False	NA	5	True	ATTAAA	-17	NA	51962820	52012125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
Isoform_107439_15	chr2	+	8725	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	31	0	intron_retention	FALSE	canonical	0	0	junction_15	126.478033296594	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962874	52012393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
Isoform_10744_6	chr10	-	191	1	Intergenic	novelGene_1266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTACCAGGCATTTT	3241	False	NA	NA	False	NA	NA	NA	128182857	128182666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128182700_128182900
Isoform_107480_8	chr2	+	1767	14	ISM	ENSMUSG00000036053.18	ENSMUST00000050719.13	3380	27	-86	24434	-78	-24434	5prime_fragment	FALSE	canonical	0	0	junction_1	2.16480727376466	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTCACGAACTGG	5337	False	NA	NA	False	AAGAAA	-35	NA	52747793	52997456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_52748272_52904814_52904899_52926515_52926597_52932304_52932382_52941211_52941296_52944465_52944619_52958513_52958623_52962221_52962299_52963651_52963746_52987282_52987358_52991437_52991549_52993668_52993819_52995490_52995593_52997364
Isoform_107482_3	chr2	+	2245	4	ISM	ENSMUSG00000036053.18	ENSMUST00000127122.9	5508	27	268189	1	268181	-1	3prime_fragment	FALSE	canonical	1	3	junction_3	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGGTCATATGTTCTAAT	562	False	NA	16	True	AATAAA	-15	NA	53016060	53023815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_53016124_53016864_53016989_53020423_53020518_53021851
Isoform_107485_82	chr2	+	2563	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-14	-1	-14	1	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTAATGGCAAGGT	NA	False	NA	25	True	ATTAAA	-18	NA	53082085	53109233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
Isoform_107487_104	chr2	+	1777	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-3	774	-3	-774	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGTTCTTGTTGTTA	NA	False	NA	11	True	AATATA	-23	NA	53082096	53108458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
Isoform_107488_12	chr2	+	2452	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-677	773	-315	-773	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGTTCTTGTTGTTAT	NA	False	NA	12	True	AATATA	-24	NA	53081422	53108459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
Isoform_107489_203	chr2	+	2520	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	29	-1	29	1	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTAATGGCAAGGT	NA	False	NA	25	True	ATTAAA	-18	NA	53082128	53109233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
Isoform_107511_44	chr2	+	5720	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	28	-3	28	3	multi-exon	FALSE	canonical	3	41	junction_1	44.6148447828747	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTGGCATTTTGATGT	NA	False	NA	NA	False	AATAAA	-18	NA	57127717	57260734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
Isoform_107512_13	chr2	+	4937	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	-19	827	-19	-827	multi-exon	TRUE	canonical	3	41	junction_1	44.6148447828747	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGGTATTTGTTGATT	NA	False	NA	NA	False	AATAAA	-21	NA	57127670	57259904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
Isoform_107518_159	chr2	+	5562	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	62	-4	62	4	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGCATTTTGATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	57128455	57260735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
Isoform_107525_6	chr2	+	4640	22	FSM	ENSMUSG00000026991.21	ENSMUST00000102754.11	4614	22	-30	4	-30	-3	multi-exon	TRUE	canonical	0	0	junction_9	23.3372202787765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	58991163	59185545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
Isoform_107526_7	chr2	+	4482	21	FSM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	3	-1	3	0	multi-exon	FALSE	canonical	0	0	junction_9	23.7412615503052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991196	59185549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
Isoform_107527_6	chr2	+	4553	21	FSM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	-70	1	-70	-1	multi-exon	FALSE	canonical	0	0	junction_9	23.7412615503052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	58991123	59185547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
Isoform_107529_6	chr2	+	4610	22	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.1264619826541	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991191	59185549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
Isoform_107530_3	chr2	+	4476	21	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.5301345287791	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	58991194	59185547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
Isoform_107535_3	chr2	+	262	2	FSM	ENSMUSG00000035168.17	ENSMUST00000142573.3	2809	2	-65	2612	-32	-162	multi-exon	TRUE	canonical	3	131	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCATGAATGAGAAGATAC	NA	False	NA	NA	False	NA	NA	NA	59442353	59477187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_59442541_59477112
Isoform_107539_103	chr2	+	7420	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	1	1	1	1	multi-exon	FALSE	canonical	3	118	junction_5	18.3464360565297	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTTGGCATTCATTGC	NA	False	NA	12	True	AATAAA	-14	NA	59442386	59676060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
Isoform_107541_6	chr2	+	7846	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	7	-431	5	-1	multi-exon	FALSE	canonical	3	118	junction_5	18.3464360565297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTATATATTTTTCAT	NA	False	NA	NA	False	GATAAA	-20	NA	59442392	59676492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
Isoform_107542_5	chr2	+	7442	27	FSM	ENSMUSG00000035168.17	ENSMUST00000037526.11	7873	27	-1	432	1	0	multi-exon	FALSE	canonical	3	10	junction_9	32.9830734785992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442386	59676061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
Isoform_107543_8	chr2	+	7330	26	NIC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	-14	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_1	32.7975608849195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442371	59676059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_59442541_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
Isoform_10755_5	chr10	+	161	1	Intergenic	novelGene_1267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAATA	5050	False	NA	NA	False	NA	NA	NA	128199788	128199949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128199800_128199900
Isoform_107552_23	chr2	+	3652	11	FSM	ENSMUSG00000026977.18	ENSMUST00000102747.8	2271	11	-148	-1233	12	-5	multi-exon	FALSE	canonical	3	14	junction_1	141.271405457722	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGAACTTTTTCC	NA	False	NA	22	True	AATAAA	-19	NA	60040268	60079550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_107559_431	chr2	+	3551	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	38	5	12	-5	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGAACTTTTTCC	NA	False	NA	22	True	AATAAA	-19	NA	60040268	60079550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_107563_79	chr2	+	3635	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	38	-79	12	79	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGGTTCTATTTTCTC	NA	False	NA	7	True	ATTAAA	-19	NA	60040268	60079634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_107564_119	chr2	+	3588	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	0	6	0	-6	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040230	60079549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_107566_20	chr2	+	3997	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	36	-439	10	439	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATTCATTATGAAAATG	NA	False	NA	NA	False	ATTAAA	-17	NA	60040266	60079994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_107568_15	chr2	+	3501	9	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	119.982290359869	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040268	60079549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60078233
Isoform_10757_24	chr10	-	178	1	Intergenic	novelGene_1268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTTCACTGAA	2998	False	NA	NA	False	NA	NA	NA	128208807	128208629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128208600_128208800
Isoform_107572_12	chr2	+	3529	10	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	112.133298101901	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040254	60079549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_107584_30	chr2	+	574	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	-17	9	-17	-9	multi-exon	FALSE	canonical	3	174	junction_2	3	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAAAGTGTGGTGGTA	9329	False	NA	NA	False	NA	NA	NA	60241851	60242914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_60242062_60242190_60242353_60242712
Isoform_107585_6	chr2	+	628	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	-68	6	-68	-6	multi-exon	FALSE	canonical	3	174	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGTGTGGTGGTATAC	9278	False	NA	NA	False	NA	NA	NA	60241800	60242917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_60242062_60242190_60242353_60242712
Isoform_107588_13	chr2	+	1878	8	NIC	ENSMUSG00000064289.16	novel	2227	9	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	16.9741700527476	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTACGTCGTGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	61423500	61484431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_61423553_61443994_61444143_61457246_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
Isoform_107589_11	chr2	+	1886	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	69	84	10	-3	multi-exon	FALSE	canonical	3	34	junction_2	9.53190132434987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTACGTCGTGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	61423489	61484431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
Isoform_107590_8	chr2	+	1957	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	70	12	11	-12	multi-exon	FALSE	canonical	3	34	junction_2	9.53190132434987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTTCATAAAATTCATGTC	NA	False	NA	NA	False	AATAAA	-18	NA	61423490	61484503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
Isoform_107591_5	chr2	+	1962	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	-8	85	-8	-4	multi-exon	FALSE	canonical	3	34	junction_2	9.53190132434987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTTACGTCGTGC	NA	False	NA	NA	False	ATTAAA	-14	NA	61423412	61484430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
Isoform_107592_5	chr2	+	2054	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	-20	5	-20	-5	multi-exon	FALSE	canonical	3	34	junction_2	9.53190132434987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCATGTCTGATGGG	NA	False	NA	NA	False	AATAAA	-25	NA	61423400	61484510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
Isoform_107596_2040	chr2	+	1478	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	63	0	-3	0	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8610	False	NA	31	True	AATAAA	-17	NA	61542100	61630720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
Isoform_107597_335	chr2	+	1523	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	18	0	18	0	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8565	False	NA	31	True	AATAAA	-17	NA	61542055	61630720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
Isoform_107620_130	chr2	+	3193	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	12	125	12	-125	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCTTTTTTAAATGTT	NA	False	NA	3	True	AATAAA	-15	NA	62494640	62524328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
Isoform_10763_3	chr10	+	329	1	Intergenic	novelGene_1269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAAGAAACTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	128315509	128315838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128315500_128315800
Isoform_107633_8	chr2	+	2533	7	FSM	ENSMUSG00000044647.17	ENSMUST00000122912.8	10672	7	77	8062	-1	0	multi-exon	FALSE	canonical	1	2	junction_1	4.6696419087073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTATTTTATTTATG	5680	False	NA	13	True	AAAAAG	-12	NA	65676187	65853828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_65676229_65690874_65691037_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
Isoform_107634_3	chr2	+	3833	7	FSM	ENSMUSG00000044647.17	ENSMUST00000122912.8	10672	7	77	6762	-1	-822	multi-exon	FALSE	canonical	1	2	junction_1	4.6696419087073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACTTTGGGTTTGTCA	5680	False	NA	NA	False	AATAAA	-26	NA	65676187	65855128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_65676229_65690874_65691037_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
Isoform_107636_14	chr2	+	2355	6	FSM	ENSMUSG00000044647.17	ENSMUST00000053910.10	4495	6	-2	2142	-2	-20	multi-exon	FALSE	canonical	2	6	junction_1	3.18747549010185	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTGAATCGTT	5676	False	NA	-7	True	NA	NA	NA	65676183	65853808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_65676229_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
Isoform_107638_4	chr2	+	3971	9	ISM	ENSMUSG00000027035.11	ENSMUST00000176018.2	1279	11	-137	703	-1	-703	intron_retention	TRUE	canonical	3	48	junction_8	6.78232998312527	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	68691792	68938285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346
Isoform_10764_6	chr10	-	168	1	Intergenic	novelGene_703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	3417930	3417762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_3417800_3417900
Isoform_107642_24	chr2	+	6776	12	NNC	ENSMUSG00000027035.11	novel	1279	11	NA	NA	-1	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	23.1413193478035	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGCATGAGTGTCCTTT	NA	False	NA	2	True	AATAAA	-15	NA	68691812	68944623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943092_68943114_68943365_68943572
Isoform_107643_30	chr2	+	6882	12	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	17.617609522556	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	NA	False	NA	5	True	AATAAA	-18	NA	68691813	68944626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943092_68943114_68943469_68943572
Isoform_107644_40	chr2	+	1443	12	FSM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	22	3	0	-3	multi-exon	FALSE	canonical	3	71	junction_4	9.81144550053239	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATGTTTTGAAAGTA	NA	False	NA	3	True	AATAAA	-17	NA	69477573	69497912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69484589_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
Isoform_107646_3	chr2	+	1300	11	FSM	ENSMUSG00000063145.11	ENSMUST00000134659.8	1124	11	74	-250	-8	-3	multi-exon	FALSE	canonical	2	3	junction_4	27.5109069279804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATGTTTTGAAAGTA	NA	False	NA	3	True	AATAAA	-17	NA	69477588	69497912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
Isoform_107647_4	chr2	+	2684	10	NIC	ENSMUSG00000063145.11	novel	1468	12	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	79	junction_3	8.95392871906924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATGTTTTGAAAGTA	NA	False	NA	3	True	AATAAA	-17	NA	69477590	69497912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
Isoform_107649_16	chr2	+	1023	11	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	5	25	combination_of_known_junctions	TRUE	canonical	3	54	junction_1	133.943420891061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCCCGAAAGCATAAG	NA	False	NA	NA	False	AAGAAA	-31	NA	69553153	69571982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829
Isoform_107651_11	chr2	+	6180	15	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-17	-5	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	118.295461986209	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTTGGGATTGTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	69553180	69584351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
Isoform_10766_13	chr10	+	172	1	Antisense	novelGene_ENSMUSG00000025366.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGTCCCTATT	NA	False	NA	NA	False	NA	NA	NA	128350306	128350478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_128350300_128350500
Isoform_107660_78	chr2	+	6087	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	37	3	-12	-3	multi-exon	FALSE	canonical	3	282	junction_1	41.7748260879032	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGGGATTGTGCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	69553185	69584353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
Isoform_107662_11	chr2	+	5483	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	5	639	5	-639	multi-exon	FALSE	canonical	3	282	junction_1	41.7748260879032	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGAGTGTTGATTGCC	NA	False	NA	NA	False	AATAAA	-11	NA	69553153	69583717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
Isoform_107665_10	chr2	+	2671	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-12	1064	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	106.582877246874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTTGGTGTAATACT	NA	False	NA	NA	False	AATAAA	-20	NA	69553136	69580956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_69553302_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
Isoform_10767_12	chr10	-	174	1	Intergenic	novelGene_745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAGAGGGCAAG	NA	False	NA	NA	False	NA	NA	NA	18396031	18395857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_18395900_18396000
Isoform_107678_22	chr2	+	2178	4	FSM	ENSMUSG00000027088.11	ENSMUST00000112266.8	2194	4	16	0	6	0	multi-exon	FALSE	canonical	3	18	junction_1	37.7918274528002	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69620009	69627567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69620249_69620629_69620666_69622680_69622836_69625819
Isoform_10768_7	chr10	-	177	1	Intergenic	novelGene_1270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAACACAAAA	2316	False	NA	NA	False	NA	NA	NA	128367742	128367565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128367600_128367700
Isoform_107680_3	chr2	+	2141	4	NIC	ENSMUSG00000027088.11	novel	2194	4	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	41.6839963961657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATGTCTTCTGAAA	NA	False	NA	20	True	AATAAA	-10	NA	69620004	69627561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_69620249_69620629_69620666_69622716_69622836_69625819
Isoform_107681_202	chr2	+	2232	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	28	0	4	0	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69620007	69627567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
Isoform_107687_8	chr2	+	2194	4	FSM	ENSMUSG00000027088.11	ENSMUST00000151298.8	667	4	41	-1568	4	-1	multi-exon	FALSE	canonical	3	8	junction_2	45.0653845971483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTCTTCTGAAATCTT	NA	False	NA	24	True	AATAAA	-14	NA	69620007	69627565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69620301_69620629_69620666_69622716_69622836_69625819
Isoform_107688_3	chr2	+	2251	4	FSM	ENSMUSG00000027088.11	ENSMUST00000151298.8	667	4	-17	-1567	-17	-2	multi-exon	FALSE	canonical	3	8	junction_2	45.0653845971483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATGTCTTCTGAAATCT	NA	False	NA	23	True	AATAAA	-13	NA	69619949	69627564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69620301_69620629_69620666_69622716_69622836_69625819
Isoform_107690_3	chr2	+	4244	4	NNC	ENSMUSG00000027088.11	novel	2260	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	48.8330489183981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69619980	69627567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_69620301_69620629_69621338_69621367_69622836_69625819
Isoform_107691_3	chr2	+	3832	4	FSM	ENSMUSG00000042155.4	ENSMUST00000053087.4	4617	4	212	573	212	-573	multi-exon	FALSE	canonical	0	0	junction_1	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTAATTGTAGGCTAT	5684	False	NA	NA	False	AATAAA	-21	NA	69652925	69666422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69652987_69654130_69655345_69659189_69659343_69664018
Isoform_10770_77	chr10	-	189	1	Intergenic	novelGene_1271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGTTTAGCCCGT	NA	False	NA	NA	False	NA	NA	NA	128371651	128371462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128371500_128371700
Isoform_107701_28	chr2	+	2027	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	29	-55	29	-5	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATATTTCTCACTTTGG	NA	False	NA	17	True	ATTAAA	-18	NA	69691934	69702185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
Isoform_107702_39	chr2	+	2051	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	57	-107	-4	47	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTGTTTCTGATGTT	NA	False	NA	69	True	NA	NA	NA	69691962	69702237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
Isoform_107704_141	chr2	+	1996	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	57	-52	-4	-8	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGATATTTCTCACTT	NA	False	NA	14	True	ATTAAA	-15	NA	69691962	69702182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
Isoform_10772_141	chr10	+	186	1	Intergenic	novelGene_1272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGCAAT	NA	False	NA	NA	False	NA	NA	NA	128372777	128372963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128372800_128373000
Isoform_10773_17	chr10	+	170	1	Intergenic	novelGene_1273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATACAAAGATGC	147	False	NA	NA	False	NA	NA	NA	128376637	128376807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128376600_128376800
Isoform_107732_5	chr2	+	1990	10	ISM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	-4	78708	-4	4	5prime_fragment	FALSE	canonical	3	86	junction_2	13.3231442549987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGTTTTGAACAGTTGT	4322	False	NA	NA	False	AATAAA	-23	NA	69727585	69775649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357
Isoform_107735_18	chr2	+	6586	39	FSM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	18	1468	18	0	multi-exon	FALSE	non_canonical	3	59	junction_28	22.5386863475108	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGGCAGAGTTTTGA	4344	False	NA	NA	False	AATAAA	-20	NA	69727607	69852889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
Isoform_107736_21	chr2	+	6208	39	FSM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	15	1849	15	-56	multi-exon	FALSE	non_canonical	3	59	junction_28	22.5386863475108	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTTTACATTTTTTTC	4341	False	NA	11	True	AGTAAA	-16	NA	69727604	69852508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
Isoform_107738_15	chr2	+	6229	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	15	-47	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_28	22.6070858893837	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTTTCTTATTGTGA	4341	False	NA	20	True	AGTAAA	-25	NA	69727604	69852517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
Isoform_107739_8	chr2	+	6575	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-16	0	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_28	22.6070858893837	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGGCAGAGTTTTGA	4367	False	NA	NA	False	AATAAA	-20	NA	69727630	69852889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
Isoform_107742_3	chr2	+	6263	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-43	-56	combination_of_known_junctions	TRUE	non_canonical	3	25	junction_2	26.5227127878882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTTTACATTTTTTTC	4283	False	NA	11	True	AGTAAA	-16	NA	69727546	69852508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
Isoform_107743_8	chr2	+	6176	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-16	-59	combination_of_known_junctions	FALSE	non_canonical	3	25	junction_2	26.5227127878882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAACTTTACATTTTT	4367	False	NA	8	True	AGTAAA	-13	NA	69727630	69852505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
Isoform_107745_196	chr2	+	1895	2	FSM	ENSMUSG00000075304.3	ENSMUST00000100043.3	2100	2	200	5	200	-5	multi-exon	FALSE	canonical	3	75	junction_1	0	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCTGGTCTCCTCTGA	NA	False	NA	18	True	AATAAA	-35	NA	70305466	70308068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_70305661_70306367
Isoform_107750_67	chr2	+	1207	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	-13	2	1	-2	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGAGGCCTCCCGTTCAG	NA	False	NA	7	True	AATAAA	-16	NA	70491920	70519702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
Isoform_107753_52	chr2	+	1986	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	-53	305	-53	-283	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTACTGTTGGTCTCT	NA	False	NA	11	True	ACTAAA	-16	NA	70491866	70521782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
Isoform_107754_838	chr2	+	2205	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	15	18	1	0	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70491934	70522069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
Isoform_107755_215	chr2	+	2233	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	-13	18	-13	0	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70491906	70522069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
Isoform_107767_6	chr2	+	2273	14	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	0	357	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	53.8095479968128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCAGTTCTTATGCGGTC	NA	False	NA	28	True	NA	NA	NA	70886127	70920979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
Isoform_107769_5	chr2	+	2198	13	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	4	352	combination_of_known_junctions	TRUE	canonical	3	21	junction_7	73.4886612569132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTCATCAGTTCTTATG	NA	False	NA	23	True	NA	NA	NA	70886091	70920974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
Isoform_107773_11	chr2	+	1391	10	ISM	ENSMUSG00000041966.19	ENSMUST00000102701.5	1703	13	-105	4057	3	1129	5prime_fragment	FALSE	canonical	3	195	junction_1	18.2357673234921	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGACATTGTTGTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	70886090	70914931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768
Isoform_107779_51	chr2	+	2513	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	1	5225	1	355	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATCAGTTCTTATGCGG	NA	False	NA	26	True	NA	NA	NA	70886088	70920977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
Isoform_107786_5	chr2	+	7737	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	1	1	1	-1	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTGTGTATACATATG	NA	False	NA	4	True	NA	NA	NA	70886088	70926201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
Isoform_107788_10	chr2	+	7693	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	47	-1	7	1	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGTGTATACATATGTA	NA	False	NA	6	True	NA	NA	NA	70886134	70926203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
Isoform_107793_23	chr2	+	1902	15	FSM	ENSMUSG00000041966.19	ENSMUST00000064141.12	1905	15	3	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	54.6553207074357	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCTTTATGACTATCC	NA	False	NA	12	True	AATAAA	-21	NA	70886127	70929486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70929358
Isoform_107794_6	chr2	+	3450	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	52.7831528471898	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGTGTGTGTATACATA	NA	False	NA	2	True	NA	NA	NA	70886109	70926199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924541
Isoform_10780_40	chr10	+	202	1	Intergenic	novelGene_1274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCCTCAGCTAGTGTCT	467	False	NA	NA	False	NA	NA	NA	128391732	128391934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128391700_128391900
Isoform_107801_155	chr2	+	2475	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	1	-10	1	-2	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCACTTTTACTTTTT	NA	False	NA	22	True	AATAAA	-24	NA	71042102	71093645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
Isoform_107802_34	chr2	+	2541	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	-66	-9	-14	2	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCACTTTTACTTTT	NA	False	NA	21	True	AATAAA	-23	NA	71042035	71093644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
Isoform_107808_596	chr2	+	2472	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	157	2	-1	-2	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCACTTTTACTTTTT	NA	False	NA	22	True	AATAAA	-24	NA	71042334	71093645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
Isoform_107813_31	chr2	+	2471	16	NIC	ENSMUSG00000027012.16	novel	2548	18	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	42	junction_15	136.596664999146	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTCAAATTTTCACTT	NA	False	NA	13	True	AATAAA	-15	NA	71042323	71093636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092994
Isoform_107819_2252	chr2	+	1479	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-14	111	-14	-111	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCACCGCCCACTGCTT	5104	False	NA	13	True	AATAAA	-14	NA	71219589	71271855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
Isoform_107820_34	chr2	+	1539	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-14	51	-14	-51	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATAATGTGGTGCTT	5104	False	NA	8	True	AATAAA	-19	NA	71219589	71271915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
Isoform_107821_69	chr2	+	1519	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-54	111	-54	-111	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCACCGCCCACTGCTT	5064	False	NA	13	True	AATAAA	-14	NA	71219549	71271855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
Isoform_107839_38	chr2	+	1221	10	FSM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	74	26	-1	-26	multi-exon	FALSE	canonical	3	42	junction_6	11.0565326201412	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71283693	71355509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
Isoform_107840_11	chr2	+	2730	10	NNC	ENSMUSG00000041921.17	novel	2770	9	NA	NA	6	-25	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	22.0224352495583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71283682	71355510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_71283743_71337128_71337287_71340084_71340706_71340729_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
Isoform_107841_3	chr2	+	527	3	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	-64	-2	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_1	15	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTATCAAGACTCGGTTG	NA	False	NA	3	True	ATTAAA	-16	NA	71549696	71561308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_71549853_71560693_71560778_71561021
Isoform_107842_4	chr2	+	710	4	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	9.8770215933527	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGACTCGGTTGCTTTCC	NA	False	NA	9	True	ATTAAA	-22	NA	71549729	71561314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_71549853_71553630_71553841_71560693_71560778_71561021
Isoform_107843_4	chr2	-	1158	2	Antisense	novelGene_ENSMUSG00000084794.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCCCAAAAAAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	71580659	71578423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_71579277_71580354
Isoform_107852_250	chr2	+	5802	25	NIC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	0	-74	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTGTCCCATATAATT	NA	False	NA	25	True	AGTAAA	-14	NA	71617283	71688686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_107854_505	chr2	+	5686	25	NIC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	0	-190	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCGCTTGTTAACACAG	NA	False	NA	28	True	AATAAA	-16	NA	71617283	71688570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_107855_82	chr2	+	5756	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-59	-190	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCGCTTGTTAACACAG	NA	False	NA	28	True	AATAAA	-16	NA	71617213	71688570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_107858_22	chr2	+	5946	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-58	1	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTTTATTTATTTTAG	NA	False	NA	100	True	TATAAA	-15	NA	71617214	71688761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_10786_4	chr10	+	1517	4	Antisense	novelGene_ENSMUSG00002076354.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAGAGAGAGCGAGAAGC	2368	False	NA	NA	False	NA	NA	NA	128393633	128401827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_128394808_128396543_128396553_128399459_128399574_128401607
Isoform_107860_38	chr2	+	5876	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-63	-74	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTGTCCCATATAATT	NA	False	NA	25	True	AGTAAA	-14	NA	71617209	71688686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_107885_53	chr2	+	3300	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	11	1874	11	-2	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGCCCTCTCCAAG	NA	False	NA	9	True	AATAAA	-21	NA	71703578	71732328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
Isoform_107886_342	chr2	+	3217	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	94	1874	-2	-2	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGCCCTCTCCAAG	NA	False	NA	9	True	AATAAA	-21	NA	71703661	71732328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
Isoform_107887_78	chr2	+	5080	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	94	11	-2	-11	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTGTAGTCTTCATA	NA	False	NA	10	True	ATTAAA	-20	NA	71703661	71734191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
Isoform_107902_16	chr2	+	6648	12	FSM	ENSMUSG00000004085.15	ENSMUST00000135469.8	6663	12	12	3	12	-3	multi-exon	FALSE	canonical	3	17	junction_11	6.87671841784634	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCCTTTGTTATGTGTC	3337	False	NA	NA	False	AATAAA	-13	NA	72116083	72237843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72232332
Isoform_107904_12	chr2	+	3228	20	FSM	ENSMUSG00000004085.15	ENSMUST00000090824.12	3334	20	103	3	12	-3	multi-exon	FALSE	canonical	2	3	junction_12	12.7949955590981	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGATTGTATGGTGG	3337	False	NA	NA	False	AATAAA	-19	NA	72116083	72272951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72240492_72240538_72242273_72242305_72242414_72242555_72246884_72246948_72248298_72248392_72263711_72263829_72265574_72265650_72268545_72268697_72271575
Isoform_107906_35	chr2	+	2465	10	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-33	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	503.918644227419	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8630	False	NA	NA	False	AATAAA	-13	NA	72306563	72317234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_72306656_72309249_72309373_72309957_72310063_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
Isoform_107912_1778	chr2	+	2359	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	61	4	-33	-4	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	1778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGTGTGTTTATTTTT	8630	False	NA	NA	False	AATAAA	-12	NA	72306563	72317233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
Isoform_107934_6	chr2	+	1132	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	23	-572	23	572	multi-exon	FALSE	canonical	1	97	junction_1	49.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTTTCTCTCAAGTTA	NA	False	NA	NA	False	NA	NA	NA	72809790	72819593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_72809940_72817871_72817977_72818715
Isoform_107935_79	chr2	+	512	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	-5	76	-5	-6	multi-exon	FALSE	canonical	1	97	junction_1	49.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAAATCTCCTGCA	NA	False	NA	14	True	NA	NA	NA	72809762	72818945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_72809940_72817871_72817977_72818715
Isoform_107936_3	chr2	+	953	3	ISM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	-20	1839	-20	-1839	5prime_fragment	FALSE	canonical	3	91	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCCCAGATGGAATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	73142977	73149301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_73143058_73145775_73145937_73148589
Isoform_107937_3	chr2	+	1134	3	ISM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	-7	1645	-7	-1645	5prime_fragment	FALSE	canonical	3	91	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTATTTTACCTATTAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	73142990	73149495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_73143058_73145775_73145937_73148589
Isoform_107939_3	chr2	+	1093	5	ISM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	45	15349	-8	447	5prime_fragment	FALSE	canonical	3	52	junction_4	23.0475052879916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTTTTTGTTTGTTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	73142989	73152813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328
Isoform_107940_65	chr2	+	3243	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	60	6	2	-6	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATTCATTTGATCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	73143004	73168156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
Isoform_107945_3	chr2	+	2749	2	FSM	ENSMUSG00000001819.5	ENSMUST00000001872.5	2483	2	-266	0	-266	0	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTATTTGACATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	74498387	74501943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_74499423_74500229
Isoform_107946_9	chr2	+	1888	2	FSM	ENSMUSG00000043342.10	ENSMUST00000059272.10	2136	2	222	26	222	-26	multi-exon	FALSE	canonical	2	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGCCCAGCCGCTGGC	NA	False	NA	NA	False	AATAAA	-15	NA	74528292	74530526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_74529178_74529523
Isoform_107947_4	chr2	+	2114	2	FSM	ENSMUSG00000043342.10	ENSMUST00000059272.10	2136	2	18	4	18	-4	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGTTGTGTGACTGCTC	NA	False	NA	NA	False	AATAAA	-37	NA	74528088	74530548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_74529178_74529523
Isoform_107949_546	chr2	+	1225	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	32	1693	5	234	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTTCATTTACTTTG	NA	False	NA	16	True	AATAAA	-14	NA	74656178	74707082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
Isoform_10795_33	chr10	+	175	1	Intergenic	novelGene_1275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGGAAGACATATGG	3793	False	NA	NA	False	NA	NA	NA	128442948	128443123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128442900_128443100
Isoform_107956_15	chr2	+	2082	8	NIC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	0	234	intron_retention	FALSE	canonical	3	792	junction_1	49.0946607513049	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTTCATTTACTTTG	NA	False	NA	16	True	AATAAA	-14	NA	74656173	74707082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74699774_74700751_74700829_74706646
Isoform_10796_12	chr10	-	295	1	Antisense	novelGene_ENSMUSG00000112068.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCCCATTCCTTGAGG	3453	False	NA	NA	False	NA	NA	NA	128452119	128451824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_128451800_128452100
Isoform_107963_1145	chr2	+	1864	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	3286	0	0	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_107964_278	chr2	+	2248	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2902	0	384	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGGCATGCTTTC	7481	False	NA	20	True	AATAAA	-20	NA	75489610	75496849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_107966_155	chr2	+	3036	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2114	0	1172	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCTTTTATTCATA	7481	False	NA	NA	False	ATTAAA	-16	NA	75489610	75497637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_107968_86	chr2	+	5150	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	0	0	0	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7481	False	NA	3	True	ATTAAA	-18	NA	75489610	75499751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_107984_1918	chr2	+	1575	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	73	0	-73	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7481	False	NA	NA	False	NA	NA	NA	75489610	75496110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_107985_246	chr2	+	2314	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-666	0	384	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGGCATGCTTTC	7481	False	NA	20	True	AATAAA	-20	NA	75489610	75496849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_107986_104	chr2	+	3102	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-1454	0	1172	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCTTTTATTCATA	7481	False	NA	NA	False	ATTAAA	-16	NA	75489610	75497637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_107987_1187	chr2	+	1930	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-282	0	0	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_10799_5	chr10	+	176	1	Intergenic	novelGene_1276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACCAAAAGAACCAG	5211	False	NA	NA	False	NA	NA	NA	128464959	128465135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128465000_128465100
Isoform_107994_84	chr2	+	5216	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-3568	0	0	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7481	False	NA	3	True	ATTAAA	-18	NA	75489610	75499751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_10800_304	chr10	+	176	1	Intergenic	novelGene_1277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGC	1856	False	NA	NA	False	NA	NA	NA	128490957	128491133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_128491000_128491100
Isoform_10805_22	chr10	-	1135	1	Genic_Genomic	ENSMUSG00000000711.4	novel	NA	NA	NA	NA	-21	-13348	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128532154	128531019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_128531000_128532200
Isoform_108051_800	chr2	+	5556	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	98	1705	86	-1705	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAAGTGTGGAGCTG	585	False	NA	17	True	AATAAA	-28	NA	75662618	75759989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
Isoform_108055_259	chr2	+	5650	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	2	1707	2	-1707	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGGAAGTGTGGAGC	489	False	NA	15	True	AATAAA	-26	NA	75662522	75759987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
Isoform_108065_42	chr2	+	7261	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	98	0	86	0	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTTTACAGAACCTTT	585	False	NA	5	True	AATAAA	-17	NA	75662618	75761694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
Isoform_108089_13	chr2	+	4758	9	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	26	3	26	-3	intron_retention	FALSE	canonical	3	321	junction_1	18.2054250156375	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGACTTATTTATAT	NA	False	NA	52	True	AATAAA	-18	NA	76200353	76214109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708
Isoform_108090_509	chr2	+	1871	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	23	4	23	-4	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCATGACTTATTTATA	NA	False	NA	51	True	AATAAA	-17	NA	76200350	76214108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
Isoform_108091_17	chr2	+	1934	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	-38	2	-38	-2	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGACTTATTTATATG	NA	False	NA	53	True	AATAAA	-19	NA	76200289	76214110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
Isoform_108096_8	chr2	+	2367	10	NNC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	62	5793	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	106.437717254369	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTTTACAGTCTTAT	NA	False	NA	NA	False	AATAAA	-30	NA	76200389	76219905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76219060
Isoform_108098_5	chr2	+	937	2	FSM	ENSMUSG00000042359.19	ENSMUST00000134213.2	422	2	-56	-459	-3	-5	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTCAACTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	76236848	76238270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_76237034_76237518
Isoform_108099_3	chr2	+	2357	17	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.2259796528383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGTTCTCAGAGTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	76236859	76410377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_76237034_76237864_76237950_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
Isoform_108100_12	chr2	+	2344	17	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	9	3	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	10.9784946030865	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGATGTTCTCAGAGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	76236860	76410375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
Isoform_108102_28	chr2	+	3433	26	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	8.49621092016906	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTATAGCTACGCGT	NA	False	NA	6	True	AATAAA	-17	NA	76236863	76426389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_108103_12	chr2	+	3971	26	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	7	-18	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	8.49621092016906	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCATAGGTGTATGTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	76236858	76426922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_108105_5	chr2	+	2233	16	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	2	8	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	13.7242688532233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTCAGAGTTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	76236883	76410380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
Isoform_108106_16	chr2	+	3338	25	FSM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	-37	552	13	-1	multi-exon	FALSE	canonical	2	5	junction_10	10.6640621820309	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTTATAGCTACGCG	NA	False	NA	5	True	AATAAA	-16	NA	76236864	76426388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_108108_6	chr2	+	3876	25	FSM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	-43	20	7	-20	multi-exon	FALSE	canonical	2	5	junction_10	10.6640621820309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCATAGGTGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	76236858	76426920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_108109_8	chr2	+	3264	24	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	7	-6	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	9.67955380246139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTTTCTTATAGCT	NA	False	NA	0	True	AATAAA	-11	NA	76236858	76426383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_10811_5	chr10	-	178	1	Intergenic	novelGene_1278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTTTTTTAGTTAAA	3	True	NA	NA	False	NA	NA	NA	128549109	128548931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128548900_128549100
Isoform_108111_4	chr2	+	986	5	ISM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	0	9325	0	-5261	5prime_fragment	FALSE	canonical	3	231	junction_3	16.2230545829076	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTGTTCGTGTGTA	6506	False	NA	3	True	ATTAAA	-3	NA	76505624	76517847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625
Isoform_108112_77	chr2	+	2511	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	22	1	22	-1	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTATTTTGTTTATT	6528	False	NA	5	True	ATTAAA	-18	NA	76505646	76527171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
Isoform_108113_224	chr2	+	2260	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	22	252	22	-252	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	6528	False	NA	3	True	ATTAAA	-16	NA	76505646	76526920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
Isoform_108115_10	chr2	+	3015	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	27	-508	27	508	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCCCTCTCCATAGA	6533	False	NA	NA	False	AATAAA	-23	NA	76505651	76527680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
Isoform_108116_7	chr2	+	2321	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	-39	252	-39	-252	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	6467	False	NA	3	True	ATTAAA	-16	NA	76505585	76526920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
Isoform_108117_23	chr2	+	2219	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	29	1	29	-1	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCGGTCCTAAGTATGG	NA	False	NA	NA	False	AATAAA	-19	NA	78699419	78751636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_108119_165	chr2	+	1510	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	29	710	29	286	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTTGTCATAATGTT	NA	False	NA	9	True	AATAAA	-17	NA	78699419	78750927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_10812_7	chr10	-	253	1	Intergenic	novelGene_1279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTCCCCCACATAGGG	9407	False	NA	NA	False	NA	NA	NA	128553482	128553229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128553200_128553500
Isoform_108120_20	chr2	+	1624	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-85	710	-85	286	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTTGTCATAATGTT	NA	False	NA	9	True	AATAAA	-17	NA	78699305	78750927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_108121_91	chr2	+	1638	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	34	577	34	419	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTGTGTGTAGAGTT	NA	False	NA	7	True	ATTAAA	-14	NA	78699424	78751060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_108128_18	chr2	+	1733	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-62	578	-62	418	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTGTGTGTAGAGT	NA	False	NA	6	True	ATTAAA	-13	NA	78699328	78751059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_108134_48	chr2	+	5238	18	FSM	ENSMUSG00000027007.17	ENSMUST00000111785.9	5168	18	-74	4	-74	-4	multi-exon	FALSE	canonical	3	47	junction_14	7.70386143235054	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTAAATTTATTTTT	NA	False	NA	15	True	AATAAA	-16	NA	79465621	79503306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
Isoform_108145_28	chr2	+	4030	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	12	0	12	0	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80145821	80184387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
Isoform_108147_225	chr2	+	3779	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	264	-1	264	1	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTTTTGAAGATGATT	NA	False	NA	13	True	AATAAA	-19	NA	80146073	80184388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
Isoform_108148_113	chr2	+	3813	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	229	0	229	0	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80146038	80184387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
Isoform_10815_19	chr10	-	157	1	Intergenic	novelGene_1281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8448	False	NA	NA	False	NA	NA	NA	128575330	128575173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128575200_128575300
Isoform_108158_7	chr2	+	674	4	FSM	ENSMUSG00000027001.11	ENSMUST00000147290.8	1324	4	125	525	-1	381	multi-exon	FALSE	canonical	3	18	junction_1	41.0446910899164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTATCTAGTTAAGTGTT	NA	False	NA	20	True	AATACA	-30	NA	80447568	80461549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80447629_80451537_80451585_80454551_80454705_80461135
Isoform_108159_67	chr2	+	975	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	190	467	4	370	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTATTTCAGTATCT	NA	False	NA	9	True	AATACA	-19	NA	80447578	80461538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
Isoform_108162_16	chr2	+	4237	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	199	-2804	13	2104	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTAATTGCTTCATTG	NA	False	NA	NA	False	AATAAA	-15	NA	80447587	80464809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
Isoform_108163_7	chr2	+	880	4	FSM	ENSMUSG00000027001.11	ENSMUST00000151204.2	1993	4	-45	1158	-5	379	multi-exon	FALSE	canonical	3	15	junction_2	40.1441845795323	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTATCTAGTTAAGTG	NA	False	NA	18	True	AATACA	-28	NA	80447564	80461547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80447951_80451537_80451585_80454669_80454705_80461135
Isoform_108164_334	chr2	+	1519	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	42	-2	26	-2	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGTTTGGAAGGTTG	NA	False	NA	14	True	AATAAA	-23	NA	80469201	80489248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
Isoform_108165_43	chr2	+	1753	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	18	-212	2	208	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAGTTTGTTAATATG	NA	False	NA	NA	False	AATAAA	-16	NA	80469177	80489458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
Isoform_108183_943	chr2	+	2000	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	103	8	1	-8	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAACTATGGGCCTTT	NA	False	NA	20	True	AATAAA	-28	NA	83474881	83494958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
Isoform_108184_27	chr2	+	2085	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	19	7	19	-7	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAACTATGGGCCTTTT	NA	False	NA	21	True	AATAAA	-29	NA	83474797	83494959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
Isoform_108186_61	chr2	+	4834	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	103	-2826	1	2826	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGGGTGTTATTTTCTA	NA	False	NA	7	True	AATAAA	-18	NA	83474881	83497792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
Isoform_108189_36	chr2	+	4226	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	81	-2196	-21	2196	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTAGAGATTAATAGAAG	NA	False	NA	3	True	AATAAA	-16	NA	83474859	83497162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
Isoform_10819_3	chr10	-	3855	1	Intergenic	novelGene_1282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAACAACAACAAAAAA	8958	False	NA	NA	False	NA	NA	NA	128663346	128659491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128659500_128663300
Isoform_108201_39	chr2	+	6994	30	FSM	ENSMUSG00000027087.12	ENSMUST00000028499.11	7054	30	57	3	2	-3	multi-exon	FALSE	canonical	3	32	junction_1	22.0930902622631	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83554797	83637257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
Isoform_108203_3	chr2	+	7396	30	FSM	ENSMUSG00000027087.12	ENSMUST00000028499.11	7054	30	-345	3	-345	-3	multi-exon	FALSE	canonical	3	32	junction_1	22.0930902622631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83554395	83637257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
Isoform_108204_3	chr2	+	7286	30	FSM	ENSMUSG00000027087.12	ENSMUST00000028499.11	7054	30	-234	2	-234	-2	multi-exon	FALSE	canonical	3	32	junction_1	22.0930902622631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGTGTGGATTCTAT	NA	False	NA	19	True	AATAAA	-19	NA	83554506	83637258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
Isoform_108205_4	chr2	+	7132	30	NIC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	-84	-3	intron_retention	FALSE	canonical	3	66	junction_1	18.5760640227655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83554656	83637257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
Isoform_108207_58	chr2	+	6991	30	NIC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	2	-3	intron_retention	FALSE	canonical	3	66	junction_1	18.5760640227655	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83554797	83637257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
Isoform_108209_8	chr2	+	7055	30	NIC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	66	junction_1	18.5760640227655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGTGTGGATTCTAT	NA	False	NA	19	True	AATAAA	-19	NA	83554734	83637258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
Isoform_10822_12	chr10	-	191	1	Intergenic	novelGene_1283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAAATCTGGCT	8975	False	NA	NA	False	ACTAAA	-3	NA	128687290	128687099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128687100_128687300
Isoform_108220_3	chr2	+	5676	8	FSM	ENSMUSG00000048388.4	ENSMUST00000051454.4	5614	8	-62	0	-62	0	multi-exon	FALSE	canonical	1	2	junction_6	1.35526185435788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTAGTGTTTAATTTC	NA	False	NA	3	True	AATAAA	-16	NA	83642917	83713830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83643322_83683713_83683948_83685780_83685874_83688561_83688718_83690750_83690922_83707014_83707132_83708499_83708624_83709453
Isoform_108221_4	chr2	+	5610	8	FSM	ENSMUSG00000048388.4	ENSMUST00000051454.4	5614	8	4	0	4	0	multi-exon	FALSE	canonical	1	2	junction_6	1.35526185435788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTAGTGTTTAATTTC	NA	False	NA	3	True	AATAAA	-16	NA	83642983	83713830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83643322_83683713_83683948_83685780_83685874_83688561_83688718_83690750_83690922_83707014_83707132_83708499_83708624_83709453
Isoform_108222_5	chr2	+	3541	5	FSM	ENSMUSG00000086598.10	ENSMUST00000133437.3	3052	5	-491	2	-24	-2	multi-exon	FALSE	canonical	0	0	junction_3	7.11951543294907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTGCTTTGTGGTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	84489398	84499122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84489938_84490440_84490526_84491391_84491504_84491774_84491945_84496487
Isoform_108223_64	chr2	+	3382	4	NIC	ENSMUSG00000086598.10	novel	3052	5	NA	NA	18	-7	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	3.2659863237109	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGATTTGCTTTGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	84489440	84499117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_84489938_84490440_84490526_84491774_84491945_84496487
Isoform_108226_288	chr2	+	2036	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	23	0	23	0	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTGGAGTCTTCCCT	3380	False	NA	12	True	AATAAA	-21	NA	84508768	84518559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
Isoform_10823_4	chr10	-	3683	1	Intergenic	novelGene_1284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGAGGTAGCTGGTGCT	3213	False	NA	NA	False	AATAAA	-24	NA	128701854	128698171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128698200_128701900
Isoform_108231_35	chr2	+	2812	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	14	-767	14	767	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGATCTGGTTCCCTCC	3371	False	NA	16	True	AATAAA	-20	NA	84508759	84519326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
Isoform_108234_7	chr2	+	1625	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	-242	177	-242	-177	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCGTTTCTCGTGGG	NA	False	NA	NA	False	NA	NA	NA	84628929	84640343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
Isoform_108235_206	chr2	+	1361	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	24	175	18	-175	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	84629195	84640345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
Isoform_108239_333	chr2	+	632	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	57	1	57	-1	multi-exon	FALSE	canonical	3	373	junction_1	17.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGTGTCTTTACTTGAG	6474	False	NA	9	True	ATTAAA	-14	NA	84657397	84660556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84657492_84657942_84658058_84660133
Isoform_108241_30	chr2	+	675	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	14	1	14	-1	multi-exon	FALSE	canonical	3	373	junction_1	17.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGTGTCTTTACTTGAG	6431	False	NA	9	True	ATTAAA	-14	NA	84657354	84660556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84657492_84657942_84658058_84660133
Isoform_108242_59	chr2	+	2341	15	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.8209880674936	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATCTGGCTGGTGTG	NA	False	NA	5	True	AATAAA	-7	NA	84669761	84693918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_108243_34	chr2	+	2395	15	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.8209880674936	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGTATCTGTGACT	NA	False	NA	16	True	AATAAA	-18	NA	84669718	84693929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_108247_25	chr2	+	2555	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	-33	17	-20	-9	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAATGAAATCTGGCTG	NA	False	NA	0	True	AATAAA	-2	NA	84669718	84693913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_108248_140	chr2	+	2518	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	9	12	0	-4	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATCTGGCTGGTGTG	NA	False	NA	5	True	AATAAA	-7	NA	84669760	84693918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_108251_7	chr2	+	3433	14	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-2	-16	intron_retention	FALSE	canonical	3	43	junction_1	15.4214942598667	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAGGGAAATGAAAT	NA	False	NA	-7	True	NA	NA	NA	84669758	84693906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_108252_15	chr2	+	2550	15	FSM	ENSMUSG00000027075.17	ENSMUST00000111624.8	2556	15	-1	7	-1	-4	multi-exon	FALSE	canonical	3	14	junction_1	20.7551321413303	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATCTGGCTGGTGTG	306	False	NA	5	True	AATAAA	-7	NA	84670541	84693918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_108253_15	chr2	+	2388	15	FSM	ENSMUSG00000027075.17	ENSMUST00000111624.8	2556	15	161	7	161	-4	multi-exon	FALSE	canonical	3	14	junction_1	20.7551321413303	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATCTGGCTGGTGTG	468	False	NA	5	True	AATAAA	-7	NA	84670703	84693918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_108256_16	chr2	+	2447	14	FSM	ENSMUSG00000027075.17	ENSMUST00000111625.2	2487	14	31	9	31	-1	multi-exon	FALSE	canonical	3	65	junction_5	11.2969598465759	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGTATCTGTGACT	764	False	NA	16	True	AATAAA	-18	NA	84670999	84693929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_108258_11	chr2	+	2420	13	NIC	ENSMUSG00000027074.15	novel	2621	6	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	9.67923034130297	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTGCTTCTACCTCTT	NA	False	NA	7	True	AATAAA	-18	NA	84766963	84788851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_84766989_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
Isoform_108260_34	chr2	+	2613	13	FSM	ENSMUSG00000027074.15	ENSMUST00000090726.6	2583	13	-31	1	-13	-1	multi-exon	FALSE	canonical	3	20	junction_9	6.42693982821961	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGCTTCTACCTCTTT	NA	False	NA	8	True	AATAAA	-19	NA	84766976	84788852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84767194_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
Isoform_108268_3730	chr2	+	2780	17	FSM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	-45	4	-45	-1	multi-exon	FALSE	canonical	3	1260	junction_7	140.688874382447	3730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATGTCCTTATGTCT	NA	False	NA	19	True	AATAAA	-15	NA	84867532	84877449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
Isoform_10827_64	chr10	-	208	1	Intergenic	novelGene_1285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	9857	False	NA	NA	False	NA	NA	NA	128734416	128734208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128734200_128734400
Isoform_108278_185	chr2	+	2697	17	FSM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	25	-1	21	1	multi-exon	FALSE	canonical	3	121	junction_1	374.603436149483	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATGTCCTTATGTCTCC	NA	False	NA	21	True	AATAAA	-17	NA	84867819	84877451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84867875_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
Isoform_10828_9	chr10	-	279	1	Intergenic	novelGene_1286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATAAGTCTTTC	9701	False	NA	NA	False	NA	NA	NA	128738031	128737752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128737800_128738000
Isoform_108284_329	chr2	+	2943	16	ISM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	259	2	38	1	3prime_fragment	FALSE	canonical	3	1260	junction_6	129.702223059848	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATGTCCTTATGTCTCC	NA	False	NA	21	True	AATAAA	-17	NA	84867836	84877451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
Isoform_10829_44	chr10	-	178	1	Intergenic	novelGene_1287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAGAAAAAGA	8444	False	NA	NA	False	NA	NA	NA	128739288	128739110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128739100_128739300
Isoform_10830_4	chr10	-	172	1	Intergenic	novelGene_1288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	128761901	128761729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128761700_128761900
Isoform_10831_5	chr10	-	166	1	Intergenic	novelGene_1289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGACTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	128766868	128766702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128766700_128766900
Isoform_108316_11	chr2	+	3089	6	NIC	ENSMUSG00000033955.14	novel	4199	6	NA	NA	4	105	combination_of_known_splicesites	FALSE	canonical	3	133	junction_1	24.7030362506312	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGGAGTTTGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	84878369	84893034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231
Isoform_108321_332	chr2	+	5723	12	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	3	133	junction_1	44.7158152361265	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGGTTGTCCAGGATTG	NA	False	NA	3	True	AATAAA	-12	NA	84878393	84903383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
Isoform_108322_14	chr2	+	3616	11	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	74.1261762132649	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGGGGTTGTCCAGGAT	NA	False	NA	1	True	AATAAA	-10	NA	84878369	84903381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
Isoform_108325_60	chr2	+	5724	12	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	65.513735863381	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCAGGATTGTGGTG	NA	False	NA	8	True	AATAAA	-17	NA	84878393	84903388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_84878480_84881208_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
Isoform_108326_9	chr2	+	5741	12	FSM	ENSMUSG00000033955.14	ENSMUST00000111605.9	5747	12	3	3	3	1	multi-exon	FALSE	canonical	2	4	junction_1	72.8463797406729	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCAGGATTGTGGTGT	NA	False	NA	9	True	AATAAA	-18	NA	84880806	84903389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_84880905_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
Isoform_10834_4	chr10	-	179	1	Intergenic	novelGene_746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAAAATGAGTA	174	False	NA	NA	False	NA	NA	NA	18804894	18804715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_18804700_18804900
Isoform_108343_4	chr2	+	1718	5	NIC	ENSMUSG00000025838.13	novel	644	4	NA	NA	-13	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTGCATCTCCATCAG	NA	False	NA	NA	False	NA	NA	NA	87336895	87341218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_87336974_87337417_87337482_87338774_87339089_87339524_87340113_87340544
Isoform_108347_931	chr2	+	5050	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2177	0	2177	0	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	931	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509735	90566672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
Isoform_10835_5	chr10	-	257	1	Intergenic	novelGene_747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTAGGATGTAGACTGCTT	NA	False	NA	NA	False	NA	NA	NA	19393666	19393409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_19393400_19393700
Isoform_108354_47	chr2	+	5163	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2172	-108	2172	108	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCCTATTTGTTACATA	NA	False	NA	89	True	TATAAA	-20	NA	90509730	90566780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
Isoform_108356_23	chr2	+	8578	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2177	-3528	2177	3528	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAACCTCCATAAAACAT	NA	False	NA	NA	False	AATAAA	-18	NA	90509735	90570200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
Isoform_10836_302	chr10	-	166	1	Intergenic	novelGene_748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTGAATTTAGTG	NA	False	NA	NA	False	NA	NA	NA	19443345	19443179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_19443200_19443300
Isoform_10838_5	chr10	-	495	1	FSM	ENSMUSG00000020003.17	ENSMUST00000214951.2	4114	1	-30	3649	8	-3649	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	19783427	19782932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_19782900_19783400
Isoform_108388_9	chr2	+	3538	11	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	138	11873	-96	1072	intron_retention	FALSE	canonical	3	188	junction_7	18.6614576065215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATGGAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-9	NA	90575851	90599492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751
Isoform_10839_19	chr10	-	175	1	Intergenic	novelGene_749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	19807192	19807017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_19807000_19807200
Isoform_108393_23	chr2	+	4592	18	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-34	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	87.2084167868991	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTGTCTTGATTAGC	NA	False	NA	16	True	AATAAA	-20	NA	90575913	90611363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
Isoform_108400_143	chr2	+	3960	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	185	546	-49	-546	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTATCCTTTTGCTCTT	NA	False	NA	11	True	AATAAA	-20	NA	90575898	90610819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
Isoform_108403_122	chr2	+	4511	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	178	2	-56	-2	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTGTCTTGATTAGC	NA	False	NA	16	True	AATAAA	-20	NA	90575891	90611363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
Isoform_108405_21	chr2	+	5483	16	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-54	-2	intron_retention	FALSE	canonical	3	188	junction_7	57.9674238018408	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTGTCTTGATTAGC	NA	False	NA	16	True	AATAAA	-20	NA	90575893	90611363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
Isoform_108412_22	chr2	+	1082	13	NIC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	704.955687141634	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGGTGATTGGTGTC	163	False	NA	45	True	NA	NA	NA	90677565	90695729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90677708_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_108417_124	chr2	+	2299	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	129	168	-3	2	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTTAGCCTGCTGCTT	225	False	NA	9	True	NA	NA	NA	90677627	90696986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_108419_1333	chr2	+	1103	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	68	1425	-8	-3	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGGTGATTGGTGTC	164	False	NA	45	True	NA	NA	NA	90677566	90695729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_108425_143	chr2	+	1067	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-34	1248	8	1	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	180	False	NA	52	True	NA	NA	NA	90677582	90695736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_108426_25	chr2	+	1113	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-80	1248	3	1	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	134	False	NA	52	True	NA	NA	NA	90677536	90695736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_10843_16	chr10	+	177	1	Intergenic	novelGene_750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4188	False	NA	NA	False	NA	NA	NA	19961308	19961485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_19961300_19961500
Isoform_108436_33	chr2	+	2309	4	FSM	ENSMUSG00000005505.13	ENSMUST00000111464.8	2343	4	29	5	0	-5	multi-exon	FALSE	canonical	3	7	junction_1	29.2726645334669	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATTTGTGTGTCTGTGT	2364	False	NA	NA	False	AATAAA	-37	NA	90735112	90740900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90735157_90736009_90736628_90737888_90737996_90739360
Isoform_108439_246	chr2	+	2406	4	FSM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	26	5	0	-5	multi-exon	FALSE	canonical	3	67	junction_2	4.10960933531265	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATTTGTGTGTCTGTGT	2364	False	NA	NA	False	AATAAA	-37	NA	90735112	90740900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90735254_90736009_90736628_90737888_90737996_90739360
Isoform_10845_4	chr10	+	205	1	Intergenic	novelGene_751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGCTGAGCACAGAAGC	NA	False	NA	NA	False	NA	NA	NA	20007247	20007452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_20007200_20007500
Isoform_108453_45	chr2	+	4750	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	27	-2	combination_of_known_junctions	FALSE	canonical	3	185	junction_10	210.286454288294	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2405	False	NA	13	True	ATTAAA	-13	NA	90770829	90849840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_108457_19	chr2	+	7823	15	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	215.029720299881	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2406	False	NA	15	True	ATTAAA	-15	NA	90770830	90849842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
Isoform_108458_121	chr2	+	4759	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	78	-7	17	0	multi-exon	FALSE	canonical	3	193	junction_2	185.405677653416	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2395	False	NA	15	True	ATTAAA	-15	NA	90770819	90849842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_10846_45	chr10	-	174	1	Intergenic	novelGene_709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	4178377	4178203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_4178200_4178400
Isoform_108467_28	chr2	+	4738	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	3	185	junction_10	218.293848016	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTCTTCTGCGTTG	2406	False	NA	14	True	ATTAAA	-14	NA	90770830	90849841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_108473_74	chr2	+	4720	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-36	-1	combination_of_known_junctions	FALSE	canonical	3	193	junction_2	195.382630878437	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTCTTCTGCGTTG	2421	False	NA	14	True	ATTAAA	-14	NA	90770845	90849841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_108479_14	chr2	+	7656	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	200.669205852604	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2424	False	NA	15	True	ATTAAA	-15	NA	90770848	90849842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
Isoform_10848_3	chr10	-	167	1	Intergenic	novelGene_752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGTGAGTGGAGGT	7674	False	NA	NA	False	NA	NA	NA	20159265	20159098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_20159100_20159300
Isoform_108493_251	chr2	+	4590	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111451.10	4678	14	94	-6	33	-1	multi-exon	FALSE	canonical	3	395	junction_7	113.564516501784	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTCTTCTGCGTTG	2411	False	NA	14	True	ATTAAA	-14	NA	90770835	90849841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_108505_73	chr2	+	4586	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	3	185	junction_9	174.629345426316	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTCTTCTGCGTTG	2406	False	NA	14	True	ATTAAA	-14	NA	90770830	90849841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_108509_27	chr2	+	7670	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	182.048826274516	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2395	False	NA	15	True	ATTAAA	-15	NA	90770819	90849842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
Isoform_108514_22	chr2	+	2138	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	29	-2438	combination_of_known_junctions	FALSE	canonical	3	280	junction_7	133.754300931789	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTGAGGCTCCTGAA	2407	False	NA	NA	False	AATAAA	-24	NA	90770831	90847397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_108530_22	chr2	+	1656	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	-50	0	-29	0	multi-exon	FALSE	canonical	3	40	junction_4	10.5791477608992	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	7	True	AATAAA	-15	NA	90865935	90876074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
Isoform_108532_3	chr2	+	1501	7	FSM	ENSMUSG00000002104.12	ENSMUST00000111446.10	1458	7	-37	-6	-30	3	multi-exon	FALSE	canonical	1	5	junction_2	21.4683229174728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGATTCTGACCCTTCTT	NA	False	NA	10	True	AATAAA	-18	NA	90865934	90876077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90866334_90866891_90867231_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
Isoform_108536_1166	chr2	+	1581	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	61	-6	15	4	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCTCAGCCTCTGTGG	NA	False	NA	24	True	AATAAA	-25	NA	90884414	90889783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
Isoform_108537_215	chr2	+	1609	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	30	-3	-16	1	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCTTTCTCAGCCTCTG	NA	False	NA	21	True	AATAAA	-22	NA	90884383	90889780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
Isoform_10855_15	chr10	+	189	1	Intergenic	novelGene_753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTAAAAATGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	20247054	20247243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_20247100_20247200
Isoform_108550_25	chr2	+	1407	5	FSM	ENSMUSG00000002111.9	ENSMUST00000002180.8	2034	5	618	9	-66	-9	multi-exon	FALSE	canonical	3	17	junction_1	7.28010988928052	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCCCAGAGAAGTGTC	9235	False	NA	12	True	AGTAAA	-13	NA	90927058	90946092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_90927339_90929774_90929872_90943599_90943791_90944589_90944756_90945419
Isoform_108551_9	chr2	+	3262	23	NIC	ENSMUSG00000002100.16	novel	4163	35	NA	NA	4646	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	2.43425960709016	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGTCTCCTGTTCATG	NA	False	NA	NA	False	AATAAA	-22	NA	90953134	90966861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90953364_90954230_90954364_90954728_90954854_90954931_90955038_90955121_90955289_90955603_90955770_90956290_90956398_90956608_90956639_90958997_90959138_90959344_90959426_90961131_90961292_90961717_90961823_90961908_90962098_90962983_90963119_90963197_90963366_90964515_90964605_90964758_90964955_90965134_90965275_90965436_90965597_90965691_90965829_90966080_90966268_90966448_90966487_90966587
Isoform_108557_43	chr2	+	4647	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	3	2	3	-2	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGGTAAAGACTTATT	5063	False	NA	5	True	NA	NA	NA	91033259	91044440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
Isoform_108559_53	chr2	+	1839	11	FSM	ENSMUSG00000027257.14	ENSMUST00000028694.12	1862	11	24	-1	-1	0	multi-exon	FALSE	canonical	3	29	junction_1	20.1345474247622	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	4774	False	NA	20	True	AATAAA	-17	NA	91087181	91095024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
Isoform_10856_17	chr10	-	177	1	Intergenic	novelGene_754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAAAAGAACCA	NA	False	NA	NA	False	NA	NA	NA	20382251	20382074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_20382100_20382300
Isoform_108560_22	chr2	+	1835	11	FSM	ENSMUSG00000027257.14	ENSMUST00000168916.8	1859	11	24	0	-1	0	multi-exon	FALSE	canonical	3	10	junction_1	24.287651183266	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	4774	False	NA	20	True	AATAAA	-17	NA	91087181	91095024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91087272_91090212_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
Isoform_108561_57	chr2	+	1775	10	NIC	ENSMUSG00000027257.14	novel	1859	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	17.8519286920123	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	4774	False	NA	20	True	AATAAA	-17	NA	91087181	91095024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_91087272_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
Isoform_108562_741	chr2	+	2716	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	352	0	2	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5854	False	NA	NA	False	AATAAA	-25	NA	91095670	91107276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
Isoform_108564_69	chr2	+	2824	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	244	0	-75	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5746	False	NA	NA	False	AATAAA	-25	NA	91095562	91107276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
Isoform_108565_35	chr2	+	2936	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	132	0	132	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5634	False	NA	NA	False	AATAAA	-25	NA	91095450	91107276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
Isoform_10857_118	chr17	-	180	1	Intergenic	novelGene_4786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26804820	26804640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26804600_26804800
Isoform_108575_8	chr2	+	3277	12	FSM	ENSMUSG00000027253.16	ENSMUST00000143874.8	3266	12	0	-11	0	11	multi-exon	FALSE	canonical	3	17	junction_6	4.85151420513685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTAGTGTTTTTTTATT	NA	False	NA	NA	False	AATAAA	-25	NA	91287855	91309643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865
Isoform_108576_7	chr2	+	3354	12	FSM	ENSMUSG00000027253.16	ENSMUST00000143874.8	3266	12	-79	-9	-79	9	multi-exon	FALSE	canonical	3	17	junction_6	4.85151420513685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCCTAGTGTTTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	91287776	91309641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865
Isoform_108577_38	chr2	+	2498	13	ISM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	18	34484	18	8	5prime_fragment	FALSE	canonical	3	17	junction_6	4.83907704698599	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCCTAGTGTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	91287873	91309640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854
Isoform_108578_21	chr2	+	2597	13	ISM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	-79	34482	-79	10	5prime_fragment	FALSE	canonical	3	17	junction_6	4.83907704698599	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTAGTGTTTTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	91287776	91309642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854
Isoform_10858_9	chr10	-	193	1	Intergenic	novelGene_756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGTAGTTACCAAGAT	NA	False	NA	NA	False	NA	NA	NA	20802985	20802792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_20802800_20803000
Isoform_108580_3	chr2	+	8111	38	FSM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	-63	-122	-63	122	multi-exon	FALSE	canonical	0	0	junction_23	9.67152258747147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTGGCTTGGAGTCA	NA	False	NA	6	True	TATAAA	-18	NA	91287792	91344246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854_91309012_91310657_91310876_91311037_91311215_91312202_91312326_91316098_91316308_91316432_91316515_91317383_91317490_91318776_91318979_91320702_91320893_91320979_91321112_91322301_91322443_91322689_91322777_91322881_91323054_91324086_91324250_91324365_91324592_91325101_91325406_91327234_91327454_91327600_91327736_91328684_91328794_91331333_91331479_91331725_91331840_91332255_91332392_91335937_91336006_91336345_91336434_91338813_91338956_91341773
Isoform_108582_888	chr2	+	6634	44	FSM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	31	0	31	0	multi-exon	FALSE	canonical	3	508	junction_5	59.4884084586321	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357137	91451009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
Isoform_108584_13	chr2	+	6592	44	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	22	12	combination_of_known_junctions	TRUE	canonical	3	35	junction_42	103.024526214016	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTCTGGGAGTTCTGG	NA	False	NA	23	True	AATAAA	-28	NA	91357128	91451021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450095_91450185_91450326
Isoform_108587_17	chr2	+	6688	44	NIC	ENSMUSG00000040549.17	novel	6574	43	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	107.120843292069	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	12	True	AATAAA	-17	NA	91357314	91451010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_91357426_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
Isoform_10859_18	chr10	-	171	1	Intergenic	novelGene_757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGGCTTATTACCT	6954	False	NA	NA	False	NA	NA	NA	21146004	21145833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_21145800_21146000
Isoform_10860_95	chr17	-	198	1	Intergenic	novelGene_5150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATTACAACTGAGAAGC	NA	False	NA	NA	False	NA	NA	NA	74847538	74847340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_74847300_74847500
Isoform_10862_10	chr10	+	1798	1	NIC	ENSMUSG00000019970.16	novel	563	4	NA	NA	3	-9930	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21854573	21856371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_21854600_21856400
Isoform_10863_7	chr10	-	995	1	Antisense	novelGene_ENSMUSG00000019970.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	21870435	21869440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_21869400_21870400
Isoform_108631_76	chr2	+	2844	14	FSM	ENSMUSG00000027247.17	ENSMUST00000090614.11	2866	14	10	12	10	-12	multi-exon	TRUE	canonical	3	46	junction_2	93.668116113923	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480576	91502659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91480598_91482108_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_108634_474	chr2	+	2821	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	372	8	10	-8	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCATTTGGCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	91480576	91502663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_108635_22	chr2	+	2919	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	270	12	12	-12	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480474	91502659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_108641_97	chr2	+	2759	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	112	12	8	-12	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480574	91502659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_108643_19	chr2	+	2806	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	76	1	-28	-1	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480538	91502670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_108645_115	chr2	+	2834	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	8	-12	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.3500066894048	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480574	91502659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_91480598_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_108646_22	chr2	+	2973	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	10	-12	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	118.35093526268	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480576	91502659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_91480598_91481843_91482000_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_108647_15	chr2	+	3034	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	-51	-12	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	118.35093526268	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480515	91502659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_91480598_91481843_91482000_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_108649_26	chr2	+	2992	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	121.546833167554	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCATTTGGCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	91480576	91502663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_91480598_91481843_91482000_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_108661_62	chr2	+	2082	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	20	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	34.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAGAACTA	3393	False	NA	NA	False	NA	NA	NA	91541217	91551891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_91541321_91542424_91543211_91550698
Isoform_108666_67	chr2	+	2116	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	37.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAGAACTA	3449	False	NA	NA	False	NA	NA	NA	91541273	91551891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_91541411_91542424_91543211_91550698
Isoform_108671_52	chr2	+	2358	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-49	-1	20	1	multi-exon	FALSE	canonical	3	50	junction_1	26	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAGAACTA	3393	False	NA	NA	False	NA	NA	NA	91541217	91551891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91541597_91542424_91543211_91550698
Isoform_108672_72	chr2	+	2303	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	6	-1	6	1	multi-exon	FALSE	canonical	3	50	junction_1	26	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAGAACTA	3448	False	NA	NA	False	NA	NA	NA	91541272	91551891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91541597_91542424_91543211_91550698
Isoform_108679_4	chr2	+	2933	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-4	-621	1	621	multi-exon	FALSE	canonical	3	50	junction_1	26	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTTTACCTGTTGAGG	3438	False	NA	NA	False	ATTAAA	-22	NA	91541262	91552511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91541597_91542424_91543211_91550698
Isoform_108682_4	chr2	+	3142	2	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	0	1	intron_retention	FALSE	canonical	3	102	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAGAACTA	3437	False	NA	NA	False	NA	NA	NA	91541261	91551891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_91543211_91550698
Isoform_108683_108	chr2	+	4974	19	FSM	ENSMUSG00000040506.17	ENSMUST00000099712.10	5021	19	47	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_7	21.1640418320005	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560525	91749194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
Isoform_108685_4	chr2	+	4881	18	NIC	ENSMUSG00000040506.17	novel	5021	19	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	31.2936753617573	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560524	91749193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91741758_91741953_91747671
Isoform_108687_14	chr2	+	4916	18	FSM	ENSMUSG00000040506.17	ENSMUST00000111317.9	4929	18	13	0	13	0	multi-exon	TRUE	canonical	3	16	junction_8	30.449799858434	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560495	91749193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
Isoform_108688_62	chr2	+	5276	18	FSM	ENSMUSG00000040506.17	ENSMUST00000045705.14	5203	18	-74	1	13	0	multi-exon	FALSE	canonical	3	82	junction_5	14.4832560525026	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560495	91749193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
Isoform_108689_15	chr2	+	5172	17	NIC	ENSMUSG00000040506.17	novel	4929	18	NA	NA	-14	0	intron_retention	FALSE	canonical	3	16	junction_7	27.2367370246511	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560512	91749193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
Isoform_108696_7	chr2	+	1143	11	FSM	ENSMUSG00000027222.15	ENSMUST00000155891.8	1167	11	23	1	23	-1	multi-exon	FALSE	canonical	2	7	junction_1	67.8416538713496	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTGGCTCTGTGTCA	NA	False	NA	19	True	AATAAA	-19	NA	92205043	92211560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_92205167_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
Isoform_108697_201	chr2	+	1198	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	194	0	7	0	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	False	NA	21	True	AATAAA	-21	NA	92205844	92211562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
Isoform_108698_4	chr2	+	3607	11	FSM	ENSMUSG00000044916.11_ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	170	-2385	-17	-1	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTTGGCTCCATAGCTT	NA	False	NA	NA	False	CATAAA	-17	NA	92205820	92213947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
Isoform_108699_13	chr2	+	1455	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	-60	-3	-60	3	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTCTGTGTCATCAGC	NA	False	NA	24	True	AATAAA	-24	NA	92205590	92211565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
Isoform_108700_15	chr2	+	1307	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	85	0	85	0	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	False	NA	21	True	AATAAA	-21	NA	92205735	92211562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
Isoform_108702_3	chr2	+	2728	3	FSM	ENSMUSG00000027221.6	ENSMUST00000065797.7	2680	3	-50	2	-50	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTGTGATTTGGGG	7125	False	NA	NA	False	AATAAA	-13	NA	92430001	92445593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_92430494_92442038_92442169_92443487
Isoform_108704_3	chr2	+	3547	6	FSM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	17	197	17	-197	multi-exon	FALSE	canonical	1	1	junction_4	1.85472369909914	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTGTGCCCTATACTG	NA	False	NA	NA	False	AATAAA	-24	NA	92745459	92786206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_92745715_92771097_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
Isoform_108706_17	chr2	+	2796	9	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	126.560015407711	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTGCGTGGTGTCCT	NA	False	NA	13	True	NA	NA	NA	93017924	93032097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_93018093_93019433_93019569_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_108707_131	chr2	+	2826	8	NIC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	86.7591082085498	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTGCGTGGTGTCCT	NA	False	NA	13	True	NA	NA	NA	93017909	93032097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_93018093_93027241_93027324_93027806_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_108708_169	chr2	+	2654	8	FSM	ENSMUSG00000068735.15	ENSMUST00000111266.8	2703	8	47	2	11	0	multi-exon	FALSE	canonical	3	75	junction_2	82.3119997699148	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGGTGTCCTGTTTT	NA	False	NA	18	True	NA	NA	NA	93017939	93032102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_93018093_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_108709_14	chr2	+	2706	8	FSM	ENSMUSG00000068735.15	ENSMUST00000111266.8	2703	8	-7	4	-7	-2	multi-exon	FALSE	canonical	3	75	junction_2	82.3119997699148	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCGTGGTGTCCTGTT	NA	False	NA	16	True	NA	NA	NA	93017885	93032100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_93018093_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_108710_395	chr2	+	2646	8	FSM	ENSMUSG00000068735.15	ENSMUST00000090554.11	2654	8	11	-3	11	3	multi-exon	FALSE	canonical	3	171	junction_2	50.0424309757148	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTGCGTGGTGTCCT	NA	False	NA	13	True	NA	NA	NA	93017939	93032097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_108711_13	chr2	+	2739	8	FSM	ENSMUSG00000068735.15	ENSMUST00000090554.11	2654	8	-82	-3	-46	3	multi-exon	FALSE	canonical	3	171	junction_2	50.0424309757148	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTGCGTGGTGTCCT	NA	False	NA	13	True	NA	NA	NA	93017846	93032097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_108712_12	chr2	+	2610	8	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	11	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	105.728570463451	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTGCGTGGTGTCCT	NA	False	NA	13	True	NA	NA	NA	93017939	93032097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029737_93029804_93030130
Isoform_108717_9	chr2	+	1471	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	574	-5	574	5	multi-exon	FALSE	canonical	3	34	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCTAAGTTATAATTAT	NA	False	NA	NA	False	AATAAA	-21	NA	94237069	94242032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_94237312_94240803
Isoform_108725_8	chr2	+	6156	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	15	-2	15	2	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGTTATGTAGAATGT	NA	False	NA	NA	False	TATAAA	-16	NA	101508799	101532016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
Isoform_10873_7	chr10	-	180	1	Intergenic	novelGene_758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGAATATCTTGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	21885348	21885168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_21885200_21885300
Isoform_108734_4	chr2	+	5838	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	3	-136	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTGTGATATTTTATT	NA	False	NA	NA	False	ATTAAA	-30	NA	101508776	101531878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
Isoform_108735_171	chr2	+	1186	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	5	0	-2	0	multi-exon	FALSE	canonical	3	160	junction_2	9.72830920561225	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	False	NA	29	True	AATAAA	-25	NA	101716602	101731991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
Isoform_108737_3	chr2	+	2152	5	NIC	ENSMUSG00000027163.14	novel	1191	6	NA	NA	-2	0	intron_retention	FALSE	canonical	3	160	junction_2	10.8397416943394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	False	NA	29	True	AATAAA	-25	NA	101716602	101731991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101730318_101731272
Isoform_108738_10	chr2	+	1388	6	ISM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	74	5	54	1	intron_retention	FALSE	canonical	3	333	junction_2	37.3363094051889	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGAAATTTTCTT	4667	False	NA	20	True	AATAAA	-42	NA	102904093	102922984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093
Isoform_108739_233	chr2	+	875	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	39	5	19	1	multi-exon	FALSE	canonical	3	304	junction_6	40.9691618442729	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGAAATTTTCTT	4632	False	NA	20	True	AATAAA	-42	NA	102904058	102922984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
Isoform_10874_35	chr10	+	177	1	Intergenic	novelGene_704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	3569380	3569557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_3569400_3569600
Isoform_108740_21	chr2	+	957	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	-43	5	-43	1	multi-exon	FALSE	canonical	3	304	junction_6	40.9691618442729	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGAAATTTTCTT	4550	False	NA	20	True	AATAAA	-42	NA	102903976	102922984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
Isoform_108741_76	chr2	+	4554	17	FSM	ENSMUSG00000032724.6	ENSMUST00000076212.4	4558	17	4	0	4	0	multi-exon	FALSE	canonical	2	10	junction_9	4.07546009672528	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGCATCTGCTCCTGG	NA	False	NA	2	True	AATAAA	-16	NA	103396658	103548768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
Isoform_108742_10	chr2	+	4586	17	FSM	ENSMUSG00000032724.6	ENSMUST00000076212.4	4558	17	-28	0	-28	0	multi-exon	FALSE	canonical	2	10	junction_9	4.07546009672528	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGCATCTGCTCCTGG	NA	False	NA	2	True	AATAAA	-16	NA	103396626	103548768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
Isoform_108743_5	chr2	+	1579	4	FSM	ENSMUSG00000032698.16	ENSMUST00000123437.8	848	4	55	-786	55	0	multi-exon	FALSE	canonical	2	6	junction_1	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTCTTGATGTGAAA	3935	False	NA	NA	False	AATAAA	-20	NA	103799927	103812223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103800067_103800837_103801058_103806349_103806566_103811219
Isoform_108745_4	chr2	+	1671	4	FSM	ENSMUSG00000032698.16	ENSMUST00000111143.8	1654	4	0	-17	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGTGCTGTTCTTGAT	4481	False	NA	NA	False	AATAAA	-14	NA	103800473	103812217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103800711_103800837_103801058_103806349_103806566_103811219
Isoform_108746_107	chr2	+	3711	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	0	9	0	5	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCAACTGTATTTATT	NA	False	NA	5	True	NA	NA	NA	103858204	103887840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
Isoform_108749_58	chr2	+	3736	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	-25	9	-9	5	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCAACTGTATTTATT	NA	False	NA	5	True	NA	NA	NA	103858179	103887840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
Isoform_108750_137	chr2	+	2744	11	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	96.8347045227072	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTCAACTGTATTTAT	NA	False	NA	4	True	NA	NA	NA	103858196	103887839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
Isoform_108752_10	chr2	+	2923	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	79	1738	-44	-1501	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTACTGCTTATTAA	NA	False	NA	15	True	ATTAAA	-28	NA	103858144	103891847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_108753_173	chr2	+	2382	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	125	2233	0	-1996	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTTGTGTAAGTGC	NA	False	NA	34	True	AATGAA	-32	NA	103858190	103891352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_108754_112	chr2	+	2876	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	126	1738	1	-1501	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTACTGCTTATTAA	NA	False	NA	15	True	ATTAAA	-28	NA	103858191	103891847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_108755_13	chr2	+	2429	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	78	2233	-45	-1996	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTTGTGTAAGTGC	NA	False	NA	34	True	AATGAA	-32	NA	103858143	103891352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_108756_10	chr2	+	2828	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	78	1834	-45	-1597	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACACAGTCTACTGCTAA	NA	False	NA	37	True	ATTAAA	-33	NA	103858143	103891751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_108757_16	chr2	+	3353	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	136	1251	-3	-1014	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATGACTCATTTCTTAA	NA	False	NA	NA	False	GATAAA	-21	NA	103858201	103892334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_10876_35	chr10	-	175	1	Intergenic	novelGene_760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAAGTT	NA	False	NA	NA	False	NA	NA	NA	21932978	21932803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_21932800_21933000
Isoform_108762_3	chr2	+	1472	4	FSM	ENSMUSG00000068686.13	ENSMUST00000129749.8	434	4	-65	-973	-23	661	multi-exon	FALSE	canonical	3	21	junction_3	22.7596133534821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGCAAAACAAAAAAGAAA	NA	False	NA	NA	False	AAGAAA	-13	NA	103900170	103915963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103914766
Isoform_108764_5	chr2	+	585	5	FSM	ENSMUSG00000068686.13	ENSMUST00000111131.9	555	5	-1	-29	-1	2	multi-exon	FALSE	canonical	2	5	junction_4	30.2933573576783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	103900192	103921534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103920473_103920620_103921348
Isoform_108765_8	chr2	+	439	4	FSM	ENSMUSG00000068686.13	ENSMUST00000111132.8	436	4	-1	-2	-1	2	multi-exon	FALSE	canonical	3	19	junction_3	23.6690139681023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	103900192	103921534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103921348
Isoform_108766_5	chr2	+	1774	5	FSM	ENSMUSG00000032679.13	ENSMUST00000168176.8	1806	5	33	-1	-6	1	multi-exon	FALSE	canonical	3	25	junction_1	94.0063162771524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGATTATCTTGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	103926178	103945695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103926273_103928069_103928190_103934515_103934595_103941084_103941190_103944319
Isoform_108767_4	chr2	+	779	6	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	18	51	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	100.476066802	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGGAGGAGTTTAAGC	NA	False	NA	3	True	AATAAA	-21	NA	103926202	103944659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_103926273_103928069_103928190_103928356_103928422_103934515_103934595_103941084_103941190_103944319
Isoform_108769_34	chr2	+	362	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	54	1275	15	-184	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGTGTAACAAAAGTGAC	NA	False	NA	NA	False	ATTAAA	-21	NA	103926199	103944424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
Isoform_10877_3	chr10	-	4532	1	FSM	ENSMUSG00000097327.8	ENSMUST00000180697.2	209	1	-135	-4188	-9	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGCCTTGGTTTTA	NA	False	NA	-7	True	NA	NA	NA	22024731	22020199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_22020200_22024700
Isoform_108770_25	chr2	+	1602	5	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.3218894898698	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGATTATCTTGAC	NA	False	NA	NA	False	ATTAAA	-15	NA	103926199	103945694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319_103945326_103945355
Isoform_108774_33	chr2	+	1361	3	FSM	ENSMUSG00000086454.8	ENSMUST00000127350.2	536	3	-10	-815	-2	112	multi-exon	FALSE	canonical	3	101	junction_1	238	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTGCTGTGTTAATG	NA	False	NA	24	True	AAGAAA	-20	NA	104389526	104399289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_104389552_104390068_104390321_104398205
Isoform_10878_4	chr10	+	1071	1	NIC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	17	-21070	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22034484	22035555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_22034500_22035600
Isoform_108781_11	chr2	+	1568	3	FSM	ENSMUSG00000086454.8	ENSMUST00000136364.8	677	3	3	-894	-2	115	multi-exon	FALSE	canonical	3	45	junction_1	266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCTGTGTTAATGTCA	NA	False	NA	27	True	AAGAAA	-23	NA	104389526	104399292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_104389756_104390068_104390321_104398205
Isoform_108782_14	chr2	+	1407	4	NNC	ENSMUSG00000086454.8	novel	677	3	NA	NA	-2	114	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	219.022068903265	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389526	104399291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_104389756_104390068_104390321_104398205_104398836_104398995
Isoform_108784_11	chr2	+	1685	3	FSM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	-24	-891	-24	115	multi-exon	FALSE	canonical	3	184	junction_1	196.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCTGTGTTAATGTCA	NA	False	NA	27	True	AAGAAA	-23	NA	104389483	104399292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_104389830_104390068_104390321_104398205
Isoform_108786_74	chr2	+	1481	4	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	114	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	171.663106759205	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389526	104399291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_104389830_104390068_104390321_104398205_104398836_104398995
Isoform_108788_11	chr2	+	1417	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	-7111	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	77	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	104389526	104391284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_104389830_104390068_104390321_104390422
Isoform_108796_61	chr2	+	1720	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	114	intron_retention	FALSE	canonical	3	251	junction_2	163	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389526	104399291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_104390321_104398205_104398836_104398995
Isoform_108802_18	chr2	+	772	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-129	1	-34	-1	multi-exon	FALSE	canonical	3	327	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTGCTTTAGCCTTT	6866	False	NA	3	True	ATTAAA	-15	NA	104420833	104439773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_104421048_104439215
Isoform_108804_5	chr2	+	2765	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-137	-1984	-42	7	multi-exon	FALSE	canonical	3	327	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGGTGTGGCAATT	6858	False	NA	NA	False	AATAAA	-29	NA	104420825	104441758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_104421048_104439215
Isoform_108805_46	chr2	+	644	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	-32	1977	-23	0	multi-exon	FALSE	canonical	3	327	junction_1	20.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTGCTTTAGCCTTTT	6877	False	NA	4	True	ATTAAA	-16	NA	104420844	104439774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_104421048_104439215_104439318_104439435
Isoform_108809_348	chr2	+	2830	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	-23	10	-23	-10	multi-exon	FALSE	canonical	3	179	junction_7	45.0891062231222	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGCCTCCTCCTGTT	6877	False	NA	9	True	AATAAA	-10	NA	104420844	104495764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
Isoform_10881_25	chr4	-	175	1	Intergenic	novelGene_8232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGATACT	NA	False	NA	NA	False	NA	NA	NA	148606762	148606587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_148606600_148606800
Isoform_108810_22	chr2	+	2859	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	-53	11	-53	-11	multi-exon	TRUE	canonical	3	179	junction_7	45.0891062231222	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCCTCCTCCTGT	6847	False	NA	8	True	AATAAA	-9	NA	104420814	104495763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
Isoform_108814_4	chr2	+	4073	18	FSM	ENSMUSG00000045106.13	ENSMUST00000111114.8	3944	18	1	-130	1	130	multi-exon	FALSE	canonical	2	12	junction_15	13.2482289734989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAGTGCTGAATAT	NA	False	NA	5	True	ACTAAA	-22	NA	104716669	104830212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
Isoform_108816_6	chr2	+	3857	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	1	130	combination_of_known_splicesites	FALSE	canonical	2	12	junction_13	13.435276947896	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAGTGCTGAATAT	NA	False	NA	5	True	ACTAAA	-22	NA	104716669	104830212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
Isoform_108818_239	chr2	+	778	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	43	134	43	-134	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGTTTTAAATATAAGA	NA	False	NA	20	True	AATAAA	-21	NA	105735025	105795769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
Isoform_10882_17	chr10	-	4911	1	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	4218558	4213647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_4213600_4218600
Isoform_108820_7	chr2	+	907	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	43	5	43	-5	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGATGACTATCTCAT	NA	False	NA	NA	False	TATAAA	-17	NA	105735025	105795898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
Isoform_108821_10	chr2	+	680	6	NIC	ENSMUSG00000042670.6	novel	955	7	NA	NA	1	-140	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	170.067516004674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTTATGTTTTAAAT	NA	False	NA	14	True	AATAAA	-15	NA	105734983	105795763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_105735076_105738668_105738775_105763609_105763699_105767336_105767464_105794524_105794636_105795608
Isoform_108825_10	chr2	+	2661	7	FSM	ENSMUSG00000016386.16	ENSMUST00000111063.8	2848	7	185	2	185	-2	multi-exon	FALSE	canonical	3	15	junction_1	4.49691252107735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGGTGCTGCGTGGTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	106523798	106698699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_106524167_106529632_106529881_106575044_106575227_106613977_106614204_106691832_106691949_106694999_106695114_106697292
Isoform_108826_4	chr2	+	2724	7	FSM	ENSMUSG00000016386.16	ENSMUST00000111063.8	2848	7	121	3	121	-3	multi-exon	FALSE	canonical	3	15	junction_1	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGGTGCTGCGTGGTTG	NA	False	NA	NA	False	AATAAA	-15	NA	106523734	106698698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_106524167_106529632_106529881_106575044_106575227_106613977_106614204_106691832_106691949_106694999_106695114_106697292
Isoform_108829_7	chr2	+	1985	12	FSM	ENSMUSG00000027115.15	ENSMUST00000144924.8	1965	12	-30	10	-4	-10	multi-exon	FALSE	canonical	3	315	junction_6	27.0380815007217	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAATATTAAAGACA	1460	False	NA	NA	False	AATACA	-3	NA	109111166	109141169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891
Isoform_10883_18	chr10	-	2247	1	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTCGTAGCCTCCTCC	NA	False	NA	NA	False	NA	NA	NA	4218558	4216311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_4216300_4218600
Isoform_108832_545	chr2	+	3284	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	83	2	-5	-2	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTGGTTTTCCTGTT	1459	False	NA	23	True	ATTAAA	-14	NA	109111165	109172090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
Isoform_108833_88	chr2	+	3317	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	50	2	-38	-2	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTGGTTTTCCTGTT	1426	False	NA	23	True	ATTAAA	-14	NA	109111132	109172090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
Isoform_108836_9	chr2	+	4219	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	82	-932	-6	932	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGAACGAAAATGCTATT	1458	False	NA	NA	False	AATAAA	-20	NA	109111164	109173024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
Isoform_108838_7	chr2	+	4798	16	NIC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	-36	-2	intron_retention	FALSE	canonical	3	273	junction_12	41.3134360710895	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTGGTTTTCCTGTT	1428	False	NA	23	True	ATTAAA	-14	NA	109111134	109172090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
Isoform_10884_99	chr10	-	182	1	Intergenic	novelGene_762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23647906	23647724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_23647700_23647900
Isoform_108843_18	chr2	+	733	4	FSM	ENSMUSG00000027162.8	ENSMUST00000151163.2	746	4	-10	23	7	-23	multi-exon	FALSE	canonical	3	366	junction_1	18.4932420089069	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109721204	109727060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580
Isoform_108848_188	chr2	+	4160	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	0	68	0	-68	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGATGTCTGTATTT	NA	False	NA	27	True	AGTAAA	-31	NA	109721197	109731280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
Isoform_10885_7	chr10	+	169	1	Intergenic	novelGene_763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTCTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	23670026	23670195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_23670000_23670200
Isoform_108855_8	chr2	+	4159	4	ISM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	3611	1	3594	-1	3prime_fragment	FALSE	canonical	3	354	junction_3	23.7907545067406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGGGTAATGTGGTT	NA	False	NA	30	True	AGTAAA	-20	NA	109724808	109731347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_109724929_109725452_109725525_109726580_109726791_109727590
Isoform_108859_110	chr2	+	5057	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	2	1	2	-1	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATTGAAAACTGTTTTT	NA	False	NA	39	True	ATTAAA	-21	NA	109747993	109844601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
Isoform_108866_202	chr2	+	1381	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	17	672	17	-20	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAACAGTCTTTCTTGTG	NA	False	NA	13	True	ATTAAA	-20	NA	109848178	109874989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
Isoform_108867_92	chr2	+	1575	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	17	478	17	-11	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAAGTTTTCCTTTTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	109848178	109875183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
Isoform_108868_31	chr2	+	2057	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	16	-3	16	3	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACCATTTTTTTTAGA	NA	False	NA	NA	False	AATAAA	-19	NA	109848177	109875664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
Isoform_108872_31	chr2	+	1953	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	322	0	322	0	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGGGTGGAATCATT	NA	False	NA	NA	False	NA	NA	NA	112070134	112077456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
Isoform_108873_5	chr2	+	2343	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	-67	-1	-67	1	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGGGTGGAATCATTA	NA	False	NA	NA	False	NA	NA	NA	112069745	112077457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
Isoform_108874_7	chr2	+	2217	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	356	-298	356	298	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACAGTCCCACGGAGAG	NA	False	NA	NA	False	NA	NA	NA	112070168	112077754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
Isoform_108875_101	chr2	+	1913	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	362	0	362	0	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGGGTGGAATCATT	NA	False	NA	NA	False	NA	NA	NA	112070174	112077456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
Isoform_108876_8	chr2	+	2303	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	-29	1	-29	-1	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCAGAGGGTGGAATCAT	NA	False	NA	NA	False	NA	NA	NA	112069783	112077455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
Isoform_108878_1704	chr2	+	463	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	41	605	41	-605	multi-exon	FALSE	canonical	3	3938	junction_1	0	1704	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCATTTTGTGTGTTGT	NA	False	NA	22	True	ATTAAA	-16	NA	112092311	112093009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112092423_112092657
Isoform_108883_22	chr2	+	7333	25	FSM	ENSMUSG00000027130.16	ENSMUST00000028549.14	6105	25	-1224	-4	-230	-3	multi-exon	FALSE	canonical	3	33	junction_1	16.1464112799787	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112095939	112193505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
Isoform_108886_3	chr2	+	7290	24	NIC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-232	-3	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	19.1293477952058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112095937	112193505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_112097438_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
Isoform_108887_48	chr2	+	6034	25	FSM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	30	-4	30	-3	multi-exon	FALSE	canonical	3	47	junction_1	14.1194679432336	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112114951	112193505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
Isoform_108888_9	chr2	+	5988	24	NIC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	30	3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	19.8360958717408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	112114951	112193504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_112115151_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
Isoform_108897_512	chr2	+	2865	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	16	5	1	-5	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209571	112244580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
Isoform_108901_9	chr2	+	3268	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	15	-397	0	397	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATACTATTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	112209570	112244982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
Isoform_108906_8	chr2	+	2754	9	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	170.123806020792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209568	112244585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
Isoform_108912_520	chr2	+	1065	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	36	4725	36	-4725	multi-exon	FALSE	canonical	3	432	junction_1	48.4355241532493	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	396	False	NA	4	True	ATTAAA	-17	NA	112285377	112297782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
Isoform_108916_365	chr2	+	1421	6	FSM	ENSMUSG00000003604.15	ENSMUST00000003705.12	4735	6	-7	3321	-7	341	multi-exon	FALSE	canonical	3	555	junction_4	26.4227174983952	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATGTTTCCTTTCTTCA	NA	False	NA	3	True	AATAAA	-14	NA	112323301	112461597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
Isoform_108922_5	chr2	+	4255	17	FSM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	-151	131	-151	-6	multi-exon	FALSE	canonical	3	8	junction_2	4.19076365356005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTAATTCTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	113271257	113540069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_113273005_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
Isoform_108923_13	chr2	+	4192	17	FSM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	-80	123	-80	2	multi-exon	FALSE	canonical	3	8	junction_2	4.19076365356005	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTTCACATTTTATT	NA	False	NA	NA	False	NA	NA	NA	113271328	113540077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_113273005_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
Isoform_108925_254	chr2	+	2595	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-39	179	-22	-179	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGTTACCAGTTTG	NA	False	NA	8	True	ATTAAA	-17	NA	115412174	115609070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
Isoform_108930_43	chr2	+	2787	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-39	-13	-22	13	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGAGCCCTGACATAAT	NA	False	NA	20	True	AATAAA	-30	NA	115412174	115609262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
Isoform_108935_16	chr2	+	2658	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-22	-180	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	116.799821691248	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTAAGTTACCAGTTT	NA	False	NA	7	True	ATTAAA	-16	NA	115412174	115609069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115579557_115579622_115607382
Isoform_108939_14	chr2	+	2662	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-22	-179	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	114.47061046905	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGTTACCAGTTTG	NA	False	NA	8	True	ATTAAA	-17	NA	115412174	115609070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_115412467_115434044_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
Isoform_108941_9	chr2	+	2616	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	3	-180	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	116.630234374488	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTAAGTTACCAGTTT	NA	False	NA	7	True	ATTAAA	-16	NA	115412216	115609069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_115412467_115434047_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
Isoform_108943_59	chr2	+	4336	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-318	1998	-318	-1998	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTTTTTTTTTAACC	NA	False	NA	NA	False	ATTAAA	-14	NA	116951536	117010762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
Isoform_108944_41	chr2	+	6317	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-305	4	-305	-4	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGGCTTTTCTCACTTC	NA	False	NA	12	True	ATTAAA	-17	NA	116951549	117012756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
Isoform_108949_5	chr2	+	4514	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-496	1998	-496	-1998	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTTTTTTTTTAACC	NA	False	NA	NA	False	ATTAAA	-14	NA	116951358	117010762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
Isoform_10895_3	chr10	+	694	1	NIC	ENSMUSG00000019997.12	novel	2398	5	NA	NA	60	-175	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAAGCCCCTATCCG	NA	False	NA	NA	False	NA	NA	NA	24471399	24472093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_24471400_24472100
Isoform_108950_6	chr2	+	3714	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-641	2943	-641	-2943	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCAGTGTGCCTTTTT	NA	False	NA	NA	False	ATTAAA	-40	NA	116951213	117009817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
Isoform_108953_4	chr2	+	5617	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-329	728	-329	-728	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTCGCTGCTCTTCCT	NA	False	NA	NA	False	GATAAA	-14	NA	116951525	117012032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
Isoform_108959_128	chr2	+	423	4	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	0	11324	0	-25	5prime_fragment	FALSE	canonical	2	2	junction_2	0.471404520791032	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAACATAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	117080219	117090697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_117080320_117088114_117088261_117089701_117089837_117090655
Isoform_108963_60	chr2	+	3004	19	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	8	31952	8	-9008	5prime_fragment	FALSE	canonical	3	81	junction_8	8.9504810547317	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAACTCAAGGACTTT	NA	False	NA	17	True	AATACA	-28	NA	118219106	118273763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
Isoform_108964_4	chr2	+	3279	19	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	-15	31700	-15	-8756	5prime_fragment	FALSE	canonical	3	81	junction_8	8.9504810547317	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGGAGTGTCACCTCAT	NA	False	NA	NA	False	AGTAAA	-11	NA	118219083	118274015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
Isoform_108965_151	chr2	+	5166	39	FSM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	46	0	46	0	multi-exon	FALSE	canonical	3	66	junction_24	13.8429307338417	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTTCCATTTGCA	NA	False	NA	9	True	AATAAA	-15	NA	118219144	118305715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
Isoform_108967_6	chr2	+	5391	39	FSM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	-26	-153	-26	153	multi-exon	FALSE	canonical	3	66	junction_24	13.8429307338417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCCCTTGTGATCAGT	NA	False	NA	NA	False	GATAAA	-18	NA	118219072	118305868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
Isoform_10897_17	chr10	+	178	1	Intergenic	novelGene_764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCATACAG	2109	False	NA	NA	False	NA	NA	NA	24642868	24643046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_24642900_24643000
Isoform_108972_1622	chr2	+	3624	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	44	0	44	0	multi-exon	FALSE	canonical	3	422	junction_10	74.3091181573454	1622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428735	118472072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
Isoform_108974_109	chr2	+	3657	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	11	0	11	0	multi-exon	TRUE	canonical	3	422	junction_10	74.3091181573454	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428702	118472072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
Isoform_109000_7	chr2	+	3660	10	FSM	ENSMUSG00000074923.11	ENSMUST00000110853.8	3677	10	17	0	17	0	multi-exon	FALSE	canonical	1	2	junction_3	1.56347191994114	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGGTTTTTCATTC	NA	False	NA	NA	False	ATTAAA	-12	NA	118507726	118528499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118507783_118508203_118508310_118519277_118519487_118520214_118520872_118523707_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118525687_118525823_118526887
Isoform_109001_11	chr2	+	1503	10	FSM	ENSMUSG00000027331.16	ENSMUST00000123104.2	839	10	-87	-577	-23	3	multi-exon	FALSE	canonical	2	5	junction_7	167.506403046953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCTGACTAACACTAG	NA	False	NA	24	True	AATAAA	-17	NA	118644689	118665126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118661292_118661451_118662033_118662109_118664480
Isoform_109002_43	chr2	+	3915	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	201	486	-28	67	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAAAAGACTTCTCATGG	NA	False	NA	18	True	ATTAAA	-18	NA	118644684	118667691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
Isoform_109003_58	chr2	+	2863	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	207	1532	-22	-979	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTTAACCTGCCTTC	NA	False	NA	4	True	NA	NA	NA	118644690	118666645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
Isoform_109005_488	chr2	+	1345	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	207	3050	-22	4	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTGACTAACACTAGG	NA	False	NA	25	True	AATAAA	-18	NA	118644690	118665127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
Isoform_10901_38	chr10	-	196	1	Intergenic	novelGene_765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGCGGGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	24933150	24932954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_24933000_24933200
Isoform_109010_420	chr2	+	2064	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	40	1561	-34	333	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCTTCTGCGCCCAAA	NA	False	NA	41	True	ATTAAA	-13	NA	118692474	118711829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
Isoform_109011_19	chr2	+	2631	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	40	994	-34	900	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCATATCTGAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	118692474	118712396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
Isoform_109013_7	chr2	+	2730	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	65	870	-9	-870	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTCTGCAAGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	118692499	118712520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
Isoform_109015_52	chr2	+	1972	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-32	348	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCGTGTTCTGCAGG	NA	False	NA	56	True	ATTAAA	-28	NA	118692476	118711844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
Isoform_109016_10	chr2	+	2522	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-32	898	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCATATCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	118692476	118712394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
Isoform_109018_15	chr2	+	1118	10	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-34	303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.6920917631333	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATGAGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	118692474	118707750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118707622
Isoform_10902_4	chr10	+	2765	1	Intergenic	novelGene_766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATTTGACTGTAACAT	9325	False	NA	NA	False	NA	NA	NA	25137914	25140679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_25137900_25140700
Isoform_109020_10	chr2	+	4342	7	NIC	ENSMUSG00000040007.9	novel	662	2	NA	NA	14	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.733376963276	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTATTTTCTGTGTG	NA	False	NA	19	True	AATAAA	-29	NA	118730871	118755006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_118730928_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
Isoform_109021_3	chr2	+	4365	7	NNC	ENSMUSG00000040007.9	novel	662	2	NA	NA	-18	-3	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_1	14.9182960004002	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTATTTTCTGTGTG	NA	False	NA	19	True	AATAAA	-29	NA	118730839	118755006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_118730928_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752085_118752178_118752863
Isoform_109022_64	chr2	+	4601	7	FSM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	-10	3	-10	-3	multi-exon	FALSE	canonical	3	30	junction_5	7.79779171019306	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTATTTTCTGTGTG	NA	False	NA	19	True	AATAAA	-29	NA	118731923	118755006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118732239_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
Isoform_109023_33	chr2	+	4601	7	NNC	ENSMUSG00000040007.9	novel	4594	7	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	12.1609575646365	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTATTTTCTGTGT	NA	False	NA	18	True	AATAAA	-28	NA	118731913	118755005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_118732239_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752085_118752178_118752863
Isoform_109027_9	chr2	+	5133	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	0	-2427	0	2427	multi-exon	FALSE	canonical	3	106	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTATAGCATAAACATTA	3255	False	NA	NA	False	NA	NA	NA	118865270	118872677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118865950_118867398_118867696_118868520
Isoform_109029_13	chr2	+	4112	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	19	-1425	19	1425	multi-exon	FALSE	canonical	3	106	junction_2	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAAATGGGAGCCAAGT	3274	False	NA	NA	False	AATAAA	-28	NA	118865289	118871675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118865950_118867398_118867696_118868520
Isoform_109035_5	chr2	+	7060	24	FSM	ENSMUSG00000027326.14	ENSMUST00000099542.9	6525	24	34	-569	3	569	multi-exon	FALSE	canonical	3	17	junction_1	14.4274470622304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAAGTTGTGCTCTTCTC	7245	False	NA	7	True	TATAAA	-19	NA	118877633	118935171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
Isoform_109037_7	chr2	+	7062	24	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	4	569	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	14.2823274408149	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAAGTTGTGCTCTTCTC	7246	False	NA	7	True	TATAAA	-19	NA	118877634	118935171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_118877708_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
Isoform_109042_5	chr2	+	8212	24	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	11.4505594583524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCGTGGTAGCGCATGCC	7241	False	NA	59	True	TATAAA	-16	NA	118877629	118935982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
Isoform_109043_28	chr2	+	7399	24	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	3	571	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	11.4505594583524	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTTGTGCTCTTCTCTT	7245	False	NA	9	True	TATAAA	-21	NA	118877633	118935173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
Isoform_109048_163	chr2	+	2115	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	29	1224	19	858	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGATTTGGAAGAAAGC	NA	False	NA	3	True	ATTAAA	-10	NA	118943316	118966547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
Isoform_10905_41	chr10	-	176	1	Intergenic	novelGene_767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	25177423	25177247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_25177200_25177400
Isoform_109050_353	chr2	+	1791	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	11	1566	1	516	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTGTTATTTGCTGG	NA	False	NA	18	True	AATAAA	-14	NA	118943298	118966205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
Isoform_109053_33	chr2	+	1999	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	-195	1564	-181	518	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGTTATTTGCTGGAG	NA	False	NA	20	True	AATAAA	-16	NA	118943092	118966207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
Isoform_109055_13	chr2	+	2308	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	-164	1224	-150	858	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGATTTGGAAGAAAGC	NA	False	NA	3	True	ATTAAA	-10	NA	118943123	118966547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
Isoform_10906_6	chr10	-	183	1	Intergenic	novelGene_768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACTA	NA	False	NA	NA	False	NA	NA	NA	25224214	25224031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_25224000_25224200
Isoform_10907_6	chr10	-	1185	1	Intergenic	novelGene_769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAACAACACTGAGGT	2150	False	NA	NA	False	NA	NA	NA	25244734	25243549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_25243500_25244700
Isoform_109074_3	chr2	+	1915	11	NIC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	37.2821673189744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGTTTTTTCTGTCC	281	False	NA	9	True	NA	NA	NA	119039484	119047531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042110_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
Isoform_109076_85	chr2	+	1629	11	FSM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	380	-1	2	1	multi-exon	FALSE	canonical	1	23	junction_1	26.2152627299442	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGTTTTTTCTGTCC	291	False	NA	9	True	NA	NA	NA	119039494	119047531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
Isoform_109077_16	chr2	+	2556	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-290	7	-290	-7	multi-exon	TRUE	canonical	3	163	junction_1	46.3102580429002	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067552	119079988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_109078_47	chr2	+	2291	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-25	7	-25	-7	multi-exon	FALSE	canonical	3	163	junction_1	46.3102580429002	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067817	119079988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_109079_539	chr2	+	2266	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	0	7	0	-7	multi-exon	FALSE	canonical	3	163	junction_1	46.3102580429002	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067842	119079988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_10908_8	chr10	-	287	1	Intergenic	novelGene_770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	25259564	25259277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_25259300_25259600
Isoform_109081_35	chr2	+	2524	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-258	7	-258	-7	multi-exon	FALSE	canonical	3	163	junction_1	46.3102580429002	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067584	119079988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_109083_111	chr2	+	2239	11	FSM	ENSMUSG00000027315.14	ENSMUST00000110816.8	1913	11	-14	-312	-14	-7	multi-exon	FALSE	canonical	3	41	junction_1	81.6752104374393	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067943	119079988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119068028_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_109084_17	chr2	+	2293	11	FSM	ENSMUSG00000027315.14	ENSMUST00000110816.8	1913	11	-68	-312	47	-7	multi-exon	FALSE	canonical	3	41	junction_1	81.6752104374393	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067889	119079988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119068028_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_109085_26	chr2	+	2397	10	FSM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	-94	20	-18	-7	multi-exon	FALSE	canonical	3	281	junction_4	16.649620912898	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067939	119079988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_109093_5	chr2	+	2376	2	ISM	ENSMUSG00000034216.13	ENSMUST00000139367.8	3194	4	46	3304	-1	-3304	5prime_fragment	FALSE	canonical	3	66	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAATGGCTCAAAAAAAAA	6421	False	NA	NA	False	NA	NA	NA	119119266	119122664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_119119612_119120633
Isoform_109095_3	chr2	+	3184	4	FSM	ENSMUSG00000034216.13	ENSMUST00000139367.8	3194	4	11	-1	9	1	multi-exon	FALSE	canonical	3	64	junction_3	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6386	False	NA	NA	False	NA	NA	NA	119119231	119125969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399
Isoform_109096_108	chr2	+	3720	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	11	323	11	-196	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCTACAATGGTGGCCCT	6388	False	NA	-10	True	ATTAAA	-2	NA	119119233	119128611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
Isoform_109098_55	chr2	+	3946	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	8	100	8	27	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGTCCTGCAAGCCTT	6385	False	NA	NA	False	AAAAAG	-7	NA	119119230	119128834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
Isoform_109099_3	chr2	+	4974	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	13	-933	13	933	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTCAGAATTGTCTC	6390	False	NA	NA	False	TATAAA	-26	NA	119119235	119129867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
Isoform_10910_16	chr10	-	1810	1	Intergenic	novelGene_771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25303621	25301811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_25301800_25303600
Isoform_109100_762	chr2	+	1512	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	66	59	66	-59	multi-exon	FALSE	canonical	3	568	junction_2	33	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATGGTTTGTCTCTGT	7218	False	NA	22	True	CATAAA	-22	NA	119181775	119184803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119182118_119182837_119182874_119183669
Isoform_109102_361	chr2	+	1578	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	1	58	1	-58	multi-exon	FALSE	canonical	3	568	junction_2	33	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGGTTTGTCTCTGTA	7153	False	NA	23	True	CATAAA	-23	NA	119181710	119184804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119182118_119182837_119182874_119183669
Isoform_109109_71	chr2	+	2583	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	15	11	-9	1	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAGAACTTGGTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	119378192	119417497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
Isoform_109110_293	chr2	+	2502	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	96	11	-19	1	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAGAACTTGGTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	119378273	119417497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
Isoform_109114_20	chr2	+	1404	2	ISM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	33	3189	27	-3189	5prime_fragment	FALSE	canonical	3	428	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCGAAGAAAAAAAGAAATGT	NA	False	NA	NA	False	NA	NA	NA	119424810	119428038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_119424916_119426739
Isoform_10912_130	chr10	-	177	1	Intergenic	novelGene_772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATGTTTTAAATTT	NA	False	NA	NA	False	NA	NA	NA	25751733	25751556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_25751600_25751700
Isoform_109121_9	chr2	+	8106	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	24	-6749	18	-7	multi-exon	FALSE	canonical	3	71	junction_2	178.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATTGTGTGTTGTTG	NA	False	NA	17	True	AATAAA	-23	NA	119424801	119437976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119424916_119426739_119426824_119430068
Isoform_109123_81	chr2	+	2230	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	21	6049	21	707	multi-exon	FALSE	canonical	3	345	junction_2	41.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAAGGTAACCTAAATT	NA	False	NA	21	True	AATAAA	-18	NA	119424804	119431934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119424916_119426739_119426993_119430068
Isoform_109137_57	chr2	+	8268	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	27	5	27	-5	multi-exon	FALSE	canonical	3	345	junction_2	41.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATTGTGTGTTGTTGCT	NA	False	NA	19	True	AATAAA	-25	NA	119424810	119437978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119424916_119426739_119426993_119430068
Isoform_109143_1517	chr2	+	2148	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	432	380	1	-380	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATTGTTTTAAGCGTAA	NA	False	NA	15	True	AATAAA	-18	NA	119449210	119480261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
Isoform_109144_125	chr2	+	2183	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	402	375	6	-375	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTAAGCGTAAGTTGC	NA	False	NA	20	True	AATAAA	-23	NA	119449180	119480266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
Isoform_109145_44	chr2	+	2529	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	432	-1	1	1	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCTATAGTTCAGTACT	NA	False	NA	NA	False	AATAAA	-22	NA	119449210	119480642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
Isoform_10916_7	chr10	+	641	1	FSM	ENSMUSG00000112808.2	ENSMUST00000218296.2	633	1	-36	28	-36	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAAGAAGAGGAGGATG	NA	False	NA	NA	False	NA	NA	NA	25983650	25984291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_25983600_25984300
Isoform_109160_70	chr2	+	2053	10	FSM	ENSMUSG00000027306.16	ENSMUST00000028771.8	3526	10	13	1460	1	-376	multi-exon	FALSE	canonical	3	97	junction_4	379.300265433633	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTTAAGCGTAAGTTG	NA	False	NA	19	True	AATAAA	-22	NA	119449210	119480265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
Isoform_10917_5	chr10	-	2230	1	Intergenic	novelGene_710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4272929	4270699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_4270700_4272900
Isoform_109172_40	chr2	+	2872	19	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	26	-1740	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	26.1054958501126	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGCCTGACTGCTGTAG	NA	False	NA	NA	False	ATTAAA	-18	NA	119505578	119564148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265_119563960_119563981
Isoform_109173_9	chr2	+	4633	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	27	4	23	-4	multi-exon	FALSE	canonical	3	65	junction_14	16.8134482341515	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATTTGGTCCAAAGCT	NA	False	NA	NA	False	AATAAA	-21	NA	119505575	119565884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
Isoform_109178_5	chr2	+	4632	19	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	26.1054958501126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTTGGTCCAAAGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	119505555	119565885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265_119563960_119563981
Isoform_109179_3	chr2	+	2229	15	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	-33	-1740	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	23.3121016133821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGCCTGACTGCTGTAG	NA	False	NA	NA	False	ATTAAA	-18	NA	119541443	119564148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265_119563960_119563979
Isoform_10918_12	chr6	-	176	1	Intergenic	novelGene_9734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	148863903	148863727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_148863700_148863900
Isoform_109181_457	chr2	+	1830	7	FSM	ENSMUSG00000027296.8	ENSMUST00000028758.8	1818	7	-12	0	-12	0	multi-exon	FALSE	canonical	3	153	junction_1	9.41039614232874	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	23	True	AATAAA	-24	NA	119572805	119581744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
Isoform_109182_219	chr2	+	1854	7	FSM	ENSMUSG00000027296.8	ENSMUST00000028758.8	1818	7	-36	0	-36	0	multi-exon	FALSE	canonical	3	153	junction_1	9.41039614232874	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	23	True	AATAAA	-24	NA	119572781	119581744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
Isoform_10919_4	chr10	-	191	1	Intergenic	novelGene_773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGTTTTTTATGG	NA	False	NA	NA	False	NA	NA	NA	26657973	26657782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_26657800_26658000
Isoform_109190_57	chr2	+	3667	19	NIC	ENSMUSG00000027298.18	novel	3529	8	NA	NA	39	-2	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	57.453819351064	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	119629846	119648583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119629897_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_109191_523	chr2	+	3744	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	243	2	243	-2	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	119630237	119648583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_109192_234	chr2	+	3949	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	38	2	38	-2	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	119630032	119648583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_109195_24	chr2	+	4088	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	-101	2	86	-2	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	119629893	119648583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_109197_12	chr2	+	4132	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	-148	5	39	-5	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCTTTGTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	119629846	119648580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_10920_49	chr2	-	177	1	Intergenic	novelGene_6546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3816	False	NA	NA	False	NA	NA	NA	126496837	126496660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_126496700_126496800
Isoform_10921_127	chr10	+	177	1	Intergenic	novelGene_774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGAAAAAGAACATAAGCT	NA	False	NA	NA	False	NA	NA	NA	27449061	27449238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_27449100_27449200
Isoform_109214_3	chr2	+	12106	24	FSM	ENSMUSG00000033943.16	ENSMUST00000110774.8	13931	24	-10	1835	-10	-3	multi-exon	FALSE	canonical	3	29	junction_1	56.5525668439122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGTGTTGGGAGGTT	NA	False	NA	11	True	AATAAA	-22	NA	119727698	119798227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
Isoform_10922_4	chr10	+	179	1	Intergenic	novelGene_775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	27787270	27787449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_27787300_27787400
Isoform_109238_3	chr2	+	7171	31	NNC	ENSMUSG00000033902.13	novel	4687	31	NA	NA	-274	-12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_30	5.28898225874632	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTAGCAAATTCTGAGA	3131	False	NA	36	True	AATAAA	-17	NA	119802905	119857877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584_119856750_119856782
Isoform_109239_6	chr2	+	3449	7	NNC	ENSMUSG00000033902.13	novel	6942	30	NA	NA	331	-13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	8.67307455417179	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCTAGCAAATTCTGAG	8935	False	NA	35	True	AATAAA	-16	NA	119852872	119857876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584_119856748_119856782
Isoform_10924_16	chr10	+	2421	1	FSM	ENSMUSG00000019889.11	ENSMUST00000219107.2	2364	1	-58	1	-7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	27950842	27953263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_27950800_27953300
Isoform_109240_10	chr2	+	1433	8	ISM	ENSMUSG00000033852.17	ENSMUST00000162393.8	5092	27	7	10435	-4	-2395	5prime_fragment	FALSE	canonical	3	18	junction_5	45.292248289327	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCTCATGTTCCCCGT	NA	False	NA	10	True	NA	NA	NA	119857980	119863079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119861982_119862133_119862321_119862482_119862594
Isoform_109241_116	chr2	+	1361	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	12	0	-9	0	multi-exon	FALSE	canonical	3	72	junction_5	32.3128836376389	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857975	119863075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
Isoform_109242_30	chr2	+	1283	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	49.2084568161025	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857976	119863075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862321_119862482_119862594
Isoform_109244_37	chr2	+	1261	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	49.0736408087093	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857979	119863075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862055_119862133_119862321_119862482_119862594
Isoform_109245_6	chr2	+	1178	6	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	57.5902769571392	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857985	119863075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862321_119862482_119862594
Isoform_109246_6	chr2	+	2164	5	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	85	junction_1	30.5399328748444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857967	119863075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119862482_119862594
Isoform_109248_11	chr2	+	2425	4	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	85	junction_1	35.2167889254858	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857979	119863075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119858058_119860538_119860693_119860769_119862482_119862594
Isoform_109249_3	chr2	+	1345	8	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	55.0810163971848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACACTTGTTCTCATGT	NA	False	NA	3	True	NA	NA	NA	119857976	119863072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119861982_119862133_119862321_119862482_119862594
Isoform_109250_11	chr2	+	1275	8	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	46.6533022651655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857976	119863075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
Isoform_109251_3	chr2	+	2069	5	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	17	junction_1	58.2167286954532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857977	119863075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119862482_119862594
Isoform_109253_3	chr2	+	2130	5	FSM	ENSMUSG00000062646.13	ENSMUST00000154574.8	3099	5	307	662	1	-662	multi-exon	FALSE	canonical	3	9	junction_3	3.77491721763537	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATAATGTGGAAATAAATA	NA	False	NA	NA	False	AATAAA	-23	NA	120234683	120253478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505
Isoform_109254_7	chr2	+	2676	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	-18	0	2	0	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGACCAGTAATGCCC	NA	False	NA	10	True	NA	NA	NA	120398153	120431736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
Isoform_109255_20	chr2	+	2010	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	-19	667	1	-667	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAGCTGTATTAGCTC	NA	False	NA	23	True	AATAAA	-28	NA	120398152	120431069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
Isoform_109257_117	chr2	+	2721	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	1	1	1	-1	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAGACCAGTAATGCC	NA	False	NA	9	True	NA	NA	NA	120398152	120431735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
Isoform_109258_247	chr2	+	2020	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	36	667	10	-667	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAGCTGTATTAGCTC	NA	False	NA	23	True	AATAAA	-28	NA	120398187	120431069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
Isoform_109260_143	chr2	+	1958	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	1	764	1	-764	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGTAATGTTTCTATGA	NA	False	NA	17	True	ATTAAA	-29	NA	120398152	120430972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
Isoform_109270_76	chr2	+	3072	7	NNC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	55	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	104.533354591835	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGGCTCCAATATGAA	NA	False	NA	NA	False	AATAAA	-13	NA	120439918	120452038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455_120449930_120449953
Isoform_109273_150	chr2	+	3121	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	30	3	30	-3	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGGCTCCAATATGAA	NA	False	NA	NA	False	AATAAA	-13	NA	120439893	120452038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
Isoform_109277_8	chr2	+	706	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	8	2440	8	-786	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGCCTCCTTTACCTT	NA	False	NA	-90	True	NA	NA	NA	120439871	120449601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
Isoform_10928_66	chr10	-	177	1	Intergenic	novelGene_776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	28244857	28244680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_28244700_28244900
Isoform_109281_51	chr2	+	3052	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	30	-1652	30	-2	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGCTCCAATATGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	120439893	120452039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
Isoform_109284_10	chr2	+	2642	14	FSM	ENSMUSG00000054484.15	ENSMUST00000067582.14	2921	14	264	15	-252	-15	multi-exon	FALSE	canonical	2	3	junction_2	3.93136379667097	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATATCACAAACGGAT	NA	False	NA	NA	False	NA	NA	NA	120807761	120838318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120807960_120808179_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
Isoform_109285_183	chr2	+	1501	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	56	12	-8	-12	multi-exon	FALSE	canonical	3	138	junction_6	15.0811140172071	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGTGTCATTTAATGT	NA	False	NA	9	True	AATAAA	-18	NA	120838939	120847373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
Isoform_109286_36	chr2	+	1538	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	19	12	-10	-12	multi-exon	FALSE	canonical	3	138	junction_6	15.0811140172071	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGTGTCATTTAATGT	NA	False	NA	9	True	AATAAA	-18	NA	120838902	120847373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
Isoform_109288_3	chr2	+	1600	11	NNC	ENSMUSG00000023572.17	novel	1569	11	NA	NA	-13	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	54.9626236637226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAAATGTGTCATTTAA	NA	False	NA	6	True	AATAAA	-15	NA	120838899	120847370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841852_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
Isoform_109290_60	chr2	+	2534	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	-66	9	0	-9	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATAATGTATGCTTGA	NA	False	NA	NA	False	NA	NA	NA	120970912	120987150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
Isoform_109293_135	chr2	+	2586	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-2	-9	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATAATGTATGCTTGA	NA	False	NA	NA	False	NA	NA	NA	120970917	120987150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
Isoform_109296_4	chr2	+	5517	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-1	2935	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAGA	-15	NA	120970932	120990096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
Isoform_109297_6	chr2	+	5353	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	1	2759	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCCTATGTCTAT	NA	False	NA	NA	False	AATAAA	-13	NA	120970920	120989920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
Isoform_10930_50	chr10	-	175	1	Intergenic	novelGene_777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACACTC	NA	False	NA	NA	False	NA	NA	NA	28919015	28918840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_28918800_28919000
Isoform_109302_55	chr2	+	3541	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	30	635	-1	-634	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTTTGTTTGCTGTAC	NA	False	NA	19	True	AATAAA	-20	NA	121001725	121028616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_109304_41	chr2	+	3142	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	-45	1109	2	612	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACTCAATTTAGCTATTG	NA	False	NA	21	True	NA	NA	NA	121001650	121028142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_109309_43	chr2	+	4207	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	-1	0	-1	0	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001694	121029251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_10931_3	chr10	+	954	1	Intergenic	novelGene_778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTTTGCATTCCT	NA	False	NA	NA	False	ACTAAA	-29	NA	29235766	29236720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_29235800_29236700
Isoform_109313_19	chr2	+	2888	19	FSM	ENSMUSG00000027263.13	ENSMUST00000144076.8	2887	19	0	-1	0	0	multi-exon	FALSE	canonical	3	47	junction_18	58.617614173199	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001720	121029251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
Isoform_109314_18	chr2	+	2941	19	FSM	ENSMUSG00000027263.13	ENSMUST00000144076.8	2887	19	-53	-1	19	0	multi-exon	FALSE	canonical	3	47	junction_18	58.617614173199	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001667	121029251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
Isoform_109318_118	chr2	+	3542	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	72	636	0	-635	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTTTGTTTGCTGTA	NA	False	NA	18	True	AATAAA	-19	NA	121001720	121028615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_109319_100	chr2	+	4210	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	40	0	-1	0	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001688	121029251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_109323_45	chr2	+	2915	19	FSM	ENSMUSG00000027263.13	ENSMUST00000138601.8	2915	19	1	-1	1	0	multi-exon	FALSE	canonical	3	47	junction_18	57.833947056195	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001690	121029251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
Isoform_109330_9	chr2	+	3506	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	4	-641	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	57.8950761615355	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCTCCCTTTGTTT	NA	False	NA	12	True	AATAAA	-13	NA	121001699	121028609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_109335_11	chr2	+	3488	17	NIC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	0	-635	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	56.955266163455	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTTTGTTTGCTGTA	NA	False	NA	18	True	AATAAA	-19	NA	121001720	121028615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_109338_10	chr2	+	4171	17	NIC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	-16	0	intron_retention	FALSE	canonical	3	61	junction_3	56.955266163455	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001673	121029251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_109342_11	chr2	+	2883	18	NIC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_17	69.0773098816422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001668	121029251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
Isoform_109345_4	chr2	+	3297	4	ISM	ENSMUSG00000027254.14	ENSMUST00000110639.8	10145	6	-20	7206	-20	-5389	5prime_fragment	FALSE	canonical	0	0	junction_1	4.64279609239471	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGAAAAGAATGTAAC	NA	False	NA	NA	False	NA	NA	NA	121125914	121132713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_121126024_121129077_121129161_121129386_121129528_121129749
Isoform_109346_175	chr2	+	1516	10	FSM	ENSMUSG00000000308.15	ENSMUST00000078222.9	1518	10	2	0	2	0	multi-exon	FALSE	canonical	3	125	junction_1	32.5602954456217	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	803	False	NA	32	True	AGTAAA	-20	NA	121188258	121194218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121188341_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
Isoform_109347_9	chr2	+	1513	10	NIC	ENSMUSG00000000308.15	novel	1620	9	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.8743660217344	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	895	False	NA	32	True	AGTAAA	-20	NA	121188350	121194218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_121188430_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
Isoform_109348_4	chr2	+	1607	10	NIC	ENSMUSG00000000308.15	novel	1518	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.8743660217344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	801	False	NA	32	True	AGTAAA	-20	NA	121188256	121194218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_121188430_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
Isoform_109349_8	chr2	+	2449	9	FSM	ENSMUSG00000000308.15	ENSMUST00000000317.13	1620	9	-832	3	2	-2	multi-exon	FALSE	canonical	3	189	junction_3	17.8881070826401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGTCTGTGTTATTTC	803	False	NA	29	True	AGTAAA	-17	NA	121188258	121194215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
Isoform_109351_170	chr2	+	1594	9	FSM	ENSMUSG00000000308.15	ENSMUST00000000317.13	1620	9	26	0	-20	0	multi-exon	FALSE	canonical	3	189	junction_3	17.8881070826401	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	1661	False	NA	32	True	AGTAAA	-20	NA	121189116	121194218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
Isoform_109358_6143	chr2	+	1886	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	177	707	69	-707	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	6143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244432	121268461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
Isoform_109359_1052	chr2	+	1946	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	116	708	8	-708	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244371	121268460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
Isoform_10937_1087	chr10	-	645	1	FSM	ENSMUSG00000069682.7	ENSMUST00000092620.6	635	1	1	-11	1	11	mono-exon	FALSE	NA	NA	NA	NA	NA	1087	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGACTTCCTATATAC	NA	False	NA	3	True	AATAAA	-32	NA	29575375	29574730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_29574700_29575400
Isoform_109394_45	chr2	+	1160	2	FSM	ENSMUSG00000074884.13	ENSMUST00000134412.2	3105	2	1	1944	1	7	multi-exon	FALSE	canonical	3	5931	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCCTGGTTTGACTGGGG	NA	False	NA	4	True	ATTAAA	-21	NA	121279849	121281542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121279923_121280455
Isoform_109395_18	chr2	+	3106	2	FSM	ENSMUSG00000074884.13	ENSMUST00000134412.2	3105	2	1	-2	1	2	multi-exon	FALSE	canonical	3	5931	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGCATTCTGGGTAG	NA	False	NA	5	True	NA	NA	NA	121279849	121283488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121279923_121280455
Isoform_109397_42	chr2	+	535	3	FSM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	-10	0	5	0	multi-exon	FALSE	canonical	3	183	junction_2	2874	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGAGCGCCTGGTTTG	NA	False	NA	-3	True	ATTAAA	-14	NA	121279853	121281535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121279923_121280455_121280565_121281178
Isoform_109400_1076	chr2	+	504	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	194	2358	6	8	multi-exon	FALSE	canonical	3	5931	junction_1	722	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGGTTTGACTGGGGA	NA	False	NA	5	True	ATTAAA	-22	NA	121279869	121281543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121279923_121280455_121280565_121281201
Isoform_109401_288	chr2	+	2473	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	177	406	4	9	multi-exon	FALSE	canonical	3	5931	junction_1	722	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGGTAGAAGTTGG	NA	False	NA	12	True	NA	NA	NA	121279852	121283495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121279923_121280455_121280565_121281201
Isoform_109404_17	chr2	+	2841	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	220	-5	3	5	multi-exon	FALSE	canonical	3	5931	junction_1	722	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGAGTCCTGGGTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	121279895	121283906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121279923_121280455_121280565_121281201
Isoform_109407_81	chr2	+	601	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	122	238	-39	-2	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGGCTCTTATATTGT	NA	False	NA	10	True	TATAAA	-18	NA	121287565	121288915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
Isoform_109408_890	chr2	+	445	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	153	363	-8	3	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTTCAGTTT	NA	False	NA	23	True	AATAAA	-18	NA	121287596	121288790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
Isoform_109409_446	chr2	+	569	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	152	240	-9	-4	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGCAGGCTCTTATATT	NA	False	NA	8	True	TATAAA	-16	NA	121287595	121288913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
Isoform_10942_43	chr10	+	173	1	Intergenic	novelGene_779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTAATACACAAAA	NA	False	NA	NA	False	NA	NA	NA	30062026	30062199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_30062000_30062200
Isoform_109421_4	chr2	+	2568	9	FSM	ENSMUSG00000027242.15	ENSMUST00000132373.2	3155	9	12	575	-5	1	multi-exon	FALSE	canonical	3	42	junction_4	5.85101486923423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAAAGCTCTTTAAGT	NA	False	NA	NA	False	AATAAA	-12	NA	121337247	121363271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766
Isoform_109422_5	chr2	+	4240	13	FSM	ENSMUSG00000027242.15	ENSMUST00000028676.12	2789	13	3	-1454	3	-2	multi-exon	FALSE	canonical	3	31	junction_10	8.00347146902865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTTTGAGTAATC	NA	False	NA	NA	False	AATAAA	-20	NA	121337206	121375339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781
Isoform_109423_4	chr2	+	1850	10	NNC	ENSMUSG00000027242.15	novel	2789	13	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	16.7648957167965	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGCTCTTTAAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	121337203	121363273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121362686
Isoform_109427_3	chr2	+	2574	9	ISM	ENSMUSG00000027242.15	ENSMUST00000110603.2	2341	13	-15	10219	-15	1	5prime_fragment	FALSE	canonical	3	27	junction_1	9.78439446261239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAAAGCTCTTTAAGT	NA	False	NA	NA	False	AATAAA	-12	NA	121340313	121363271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766
Isoform_109428_3	chr2	+	4209	13	NNC	ENSMUSG00000027242.15	novel	2341	13	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	15.9345449330134	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTTTGAGTAATC	NA	False	NA	NA	False	AATAAA	-20	NA	121340308	121375339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364803_121365904_121366058_121367587_121367642_121372781
Isoform_10943_9	chr10	-	3459	1	NIC	ENSMUSG00000075266.6	novel	1532	3	NA	NA	11	-1082	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTCTGAGTTTCTTTT	NA	False	NA	0	True	ATTAAA	-29	NA	30076545	30073086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_30073100_30076500
Isoform_109434_84	chr2	+	3885	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	134	junction_10	36.99513481527	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACAGTTTTGATTATAT	NA	False	NA	8	True	AATAAA	-17	NA	121697439	121766388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765678_121765705
Isoform_109438_4	chr2	+	2728	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-22	4917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	68.2422156732913	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTTAAAAAATTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	121697428	121771618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765019_121771444
Isoform_109441_47	chr2	+	3729	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	90	junction_8	48.2649580217315	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTTTTGATTATATA	NA	False	NA	9	True	AATAAA	-18	NA	121697428	121766389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958_121765678_121765705
Isoform_109445_3	chr2	+	3807	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-36	65	at_least_one_novel_splicesite	TRUE	non_canonical	3	90	junction_8	48.2649580217315	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAATAAATGTTATCATT	NA	False	NA	73	True	ATTAAA	-2	NA	121697414	121766453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958_121765678_121765705
Isoform_109450_7	chr2	+	1287	7	ISM	ENSMUSG00000033411.17	ENSMUST00000128883.8	1236	9	-42	4672	-16	-1283	5prime_fragment	FALSE	canonical	3	361	junction_3	40.3429740544194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTTTGAGACCCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	121786924	121819592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270
Isoform_109451_10	chr2	+	1903	8	ISM	ENSMUSG00000033411.17	ENSMUST00000128883.8	1236	9	-13	-417	-7	4	intron_retention	FALSE	canonical	3	361	junction_3	40.3110356085866	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	121786953	121824681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826
Isoform_109453_249	chr2	+	3539	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	487	1027	2	0	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCTTTCTCAAAAT	NA	False	NA	11	True	AATAAA	-21	NA	121786968	121843096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
Isoform_109457_146	chr2	+	6259	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	473	-1679	-6	1679	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTGATGACATTTTT	NA	False	NA	14	True	NA	NA	NA	121786954	121845802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
Isoform_109463_7	chr2	+	6673	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-1	1679	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	135.240613976124	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTGATGACATTTTT	NA	False	NA	14	True	NA	NA	NA	121786965	121845802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
Isoform_109467_9	chr2	+	6256	13	FSM	ENSMUSG00000033411.17	ENSMUST00000110578.8	3386	13	63	-2933	-6	1679	multi-exon	FALSE	canonical	3	37	junction_3	105.582774268449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTGATGACATTTTT	NA	False	NA	14	True	NA	NA	NA	121786954	121845802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809375_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
Isoform_109478_245	chr2	+	2383	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	62	2968	-44	-2968	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCAGGTACAGGCGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	121859088	121884111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
Isoform_109479_34	chr2	+	5373	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	39	1	39	-1	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCTGTCTTTCTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	121859065	121887078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
Isoform_109480_500	chr2	+	1798	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	40	3575	40	-3575	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTGTTATATCCCAA	NA	False	NA	NA	False	AATAAA	-21	NA	121859066	121883504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
Isoform_109482_36	chr2	+	2327	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	39	3047	39	-3047	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAGTTTCTAACTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	121859065	121884032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
Isoform_109484_14	chr2	+	1866	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	-26	3573	-26	-3573	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTTATATCCCAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	121859000	121883506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
Isoform_109491_49	chr2	+	847	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	13	0	-13	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAACTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121978166	121983551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
Isoform_109492_57	chr2	+	649	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	211	0	-211	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTTGATCATATGCCAAA	NA	False	NA	NA	False	AATAAA	-17	NA	121978166	121983353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
Isoform_109494_14	chr2	+	2104	7	FSM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	5	6	5	-6	multi-exon	FALSE	canonical	3	14	junction_3	42.3910367884533	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	1950	False	NA	NA	False	AATAAA	-9	NA	122016757	122036872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122016834_122016944_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
Isoform_109497_11	chr2	+	1978	6	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	38.5725290848293	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	1936	False	NA	NA	False	AATAAA	-9	NA	122016743	122036872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_122016834_122016944_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
Isoform_109499_6	chr2	+	2143	7	NNC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	48.2749647563022	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATGTTTCTCAAAGT	1958	False	NA	NA	False	AATAAA	-12	NA	122016765	122036875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_122016834_122016944_122017027_122021087_122021150_122021605_122021790_122023712_122023787_122028866_122028956_122035291
Isoform_10950_5	chr10	-	179	1	Intergenic	novelGene_780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30705787	30705608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_30705600_30705800
Isoform_109500_25	chr2	+	1919	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATGTTTCTCAAAGT	1936	False	NA	NA	False	AATAAA	-12	NA	122016743	122036875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
Isoform_109505_8	chr2	+	2106	6	ISM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	114	6	-88	-6	3prime_fragment	FALSE	canonical	3	14	junction_2	46.343931641586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	2059	False	NA	NA	False	AATAAA	-9	NA	122016866	122036872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
Isoform_109507_3	chr2	+	2039	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	-88	-11	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	51.9055632856441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCAACAAAACAAATGTTT	2059	False	NA	NA	False	AATAAA	-4	NA	122016866	122036867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_122017027_122018390_122018531_122023712_122023787_122028866_122028956_122035291
Isoform_109508_5	chr2	+	1964	5	FSM	ENSMUSG00000027229.6	ENSMUST00000149861.2	448	5	-86	-1430	-86	-6	multi-exon	FALSE	canonical	3	28	junction_1	43.0486643230658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	2061	False	NA	NA	False	AATAAA	-9	NA	122016868	122036872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
Isoform_109510_14	chr2	+	1904	4	NIC	ENSMUSG00000027229.6	novel	448	5	NA	NA	-88	-6	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	28.5228952870419	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	2059	False	NA	NA	False	AATAAA	-9	NA	122016866	122036872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_122017027_122023712_122023787_122028866_122028956_122035291
Isoform_109513_409	chr2	+	2280	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	69	3	69	-3	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCGTATGTGGTTTGTG	NA	False	NA	13	True	AATAAA	-16	NA	122065298	122095818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
Isoform_109518_13	chr2	+	2323	8	FSM	ENSMUSG00000118663.1	ENSMUST00000239506.1	2347	8	-3	27	-3	6	multi-exon	FALSE	canonical	3	8	junction_2	2.6954231805876	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTTGCAAGTTTCCAC	NA	False	NA	NA	False	ATTAAA	-29	NA	122461116	122474723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122471036_122471230_122472613_122472745_122473758_122473885_122474529
Isoform_109519_6	chr2	+	2132	7	NIC	ENSMUSG00000118663.1	novel	2347	8	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	3.21455025366432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTAGTTTGCAAGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	122461109	122474718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122472613_122472745_122473758_122473885_122474529
Isoform_109520_13	chr2	+	679	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	4	109	4	-3	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGATTTGTGCAAGAG	NA	False	NA	20	True	AATAAA	-22	NA	122479773	122483002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
Isoform_109521_24	chr2	+	618	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	65	109	0	-3	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGATTTGTGCAAGAG	NA	False	NA	20	True	AATAAA	-22	NA	122479834	122483002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
Isoform_109523_3	chr2	+	2209	5	NIC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	60.4834688158674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGGCGATTCTTTTCA	8288	False	NA	6	True	AATAAA	-18	NA	122580441	122590021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_122580625_122584508_122584651_122586045_122586134_122587856_122588062_122588430
Isoform_109524_207	chr2	+	2080	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	28	1376	1	0	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGGCTGGCGATTCTTTT	8297	False	NA	4	True	AATAAA	-16	NA	122580450	122590019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
Isoform_109525_42	chr2	+	3456	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	28	0	1	0	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGTTTATCAGACACCG	8297	False	NA	15	True	AATAAA	-18	NA	122580450	122591395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
Isoform_109526_4	chr2	+	2191	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	-58	1351	-58	25	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTAGACCAGTGGTGG	8211	False	NA	29	True	AATAAA	-41	NA	122580364	122590044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
Isoform_109529_22	chr2	+	2077	5	FSM	ENSMUSG00000005804.15	ENSMUST00000148460.8	2088	5	12	-1	1	1	multi-exon	FALSE	canonical	3	17	junction_2	54.4443523241851	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTGGCGATTCTTTTC	8297	False	NA	5	True	AATAAA	-17	NA	122580450	122590020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122580625_122584508_122584651_122586049_122586134_122587974_122588062_122588430
Isoform_10953_16	chr10	+	170	1	Intergenic	novelGene_781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31281188	31281358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_31281200_31281400
Isoform_109530_3	chr2	+	2152	5	NNC	ENSMUSG00000005804.15	novel	2088	5	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	67.0125921002911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGAAGGCTGGCGATTCT	8296	False	NA	1	True	AATAAA	-13	NA	122580449	122590016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_122580625_122584508_122584651_122586049_122586134_122587896_122588062_122588430
Isoform_109531_3	chr2	+	1492	6	ISM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	32	4770	32	681	5prime_fragment	FALSE	canonical	3	24	junction_1	1.46969384566991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGAGCATTTGAATTGG	NA	False	NA	NA	False	AATAAA	-35	NA	124910075	124925827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950
Isoform_109532_10	chr2	+	1633	9	FSM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	31	290	31	-290	multi-exon	TRUE	canonical	2	7	junction_6	24.0624188310319	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTCTAACACTTAATTAC	NA	False	NA	4	True	AATAAA	-17	NA	124910074	124930307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
Isoform_109533_3	chr2	+	1426	8	NNC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	29	-291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	25.4502315453963	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTCTAACACTTAATTA	NA	False	NA	3	True	AATAAA	-16	NA	124910072	124930306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925234_124929339_124929442_124929883
Isoform_109534_59	chr2	+	946	7	FSM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	58	16	58	-16	multi-exon	TRUE	canonical	3	52	junction_1	864.28364685572	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	16	True	AATAAA	-17	NA	125089167	125099652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125089322_125089683_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
Isoform_109539_67	chr2	+	1615	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	235	100	-183	-100	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGGCTGGCTGTGTGT	NA	False	NA	17	True	AATAAA	-27	NA	125089636	125100428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
Isoform_109540_2410	chr2	+	844	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	235	871	-183	-11	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	2410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACATAAACTGACTGGA	NA	False	NA	21	True	AATAAA	-22	NA	125089636	125099657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
Isoform_109543_77	chr2	+	1037	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	37	876	37	-16	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	16	True	AATAAA	-17	NA	125089438	125099652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
Isoform_109544_36	chr2	+	1077	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	-3	876	-3	-16	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	16	True	AATAAA	-17	NA	125089398	125099652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
Isoform_10955_3	chr10	+	3533	1	Antisense	novelGene_ENSMUSG00000110758.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31302045	31305578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_31302000_31305600
Isoform_109555_10	chr2	+	1933	10	FSM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	-41	713	-16	-1	multi-exon	FALSE	canonical	3	11	junction_1	32.0916896284673	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTTGCTCTTGAAT	NA	False	NA	7	True	ATTAAA	-14	NA	125701012	125825506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
Isoform_109556_11	chr2	+	1889	10	FSM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	3	713	3	-1	multi-exon	FALSE	canonical	3	11	junction_1	32.0916896284673	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTTGCTCTTGAAT	NA	False	NA	7	True	ATTAAA	-14	NA	125701056	125825506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
Isoform_109558_155	chr2	+	1774	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	153	1	6	-1	multi-exon	FALSE	canonical	3	86	junction_4	15.4040238449986	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTTGCTCTTGAAT	NA	False	NA	7	True	ATTAAA	-14	NA	125708179	125825506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
Isoform_109559_148	chr2	+	1308	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	35	-1	35	1	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7314	False	NA	26	True	ATTAAA	-24	NA	125994095	126007197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
Isoform_10956_18	chr10	-	187	1	Intergenic	novelGene_782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTTCT	NA	False	NA	NA	False	NA	NA	NA	31334412	31334225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_31334200_31334400
Isoform_109560_7	chr2	+	1400	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	-60	2	-60	-2	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTCGCCCTTACCTTT	7219	False	NA	23	True	ATTAAA	-21	NA	125994000	126007194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
Isoform_109561_10	chr2	+	1173	4	NIC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	24	-1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	74.5534856477028	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTCGCCCTTACCTTTC	7303	False	NA	24	True	ATTAAA	-22	NA	125994084	126007195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_125994135_125996465_125996781_126001689_126001949_126006646
Isoform_109564_267	chr2	+	2300	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	617	1	-566	-1	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACGAGGCTTCGCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	126394943	126430162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
Isoform_10957_4	chr10	-	171	1	Intergenic	novelGene_783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTTTAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31447074	31446903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_31446900_31447100
Isoform_109573_6	chr2	+	2717	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	200	1	200	-1	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACGAGGCTTCGCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	126394526	126430162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
Isoform_109584_898	chr2	+	4139	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	23	-17	6	17	multi-exon	FALSE	canonical	3	323	junction_9	42.2163738639668	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGTCTTCTTTTTT	3599	False	NA	23	True	ATTAAA	-37	NA	126549285	126601234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
Isoform_109586_14	chr2	+	4203	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	95.8447819248509	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3599	False	NA	6	True	ATTAAA	-20	NA	126549285	126601217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574105_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
Isoform_109587_14	chr2	+	4245	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	0	8	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_3	119.650321545675	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTACATGTTTTGTC	3593	False	NA	14	True	ATTAAA	-28	NA	126549279	126601225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126562540_126562650_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
Isoform_1096_2156	SIRV6	+	484	4	FSM	SIRV6A	SIRV609	485	4	1	0	1	0	multi-exon	FALSE	canonical	3	15063	junction_3	5493.41668626083	2156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1138	2120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
Isoform_10960_18	chr10	+	181	1	Intergenic	novelGene_784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	32410513	32410694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_32410500_32410700
Isoform_109605_57	chr2	+	6133	21	FSM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	-27	-1506	-14	1506	multi-exon	TRUE	canonical	3	34	junction_11	7.58468852359805	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGTTCTTTA	NA	False	NA	3	True	AATAAA	-16	NA	126850622	126911335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
Isoform_109607_3	chr2	+	1275	9	NIC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	71.9165097526291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	2244	False	NA	NA	False	AATAAA	-20	NA	126912619	126939004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_126912651_126920849_126920998_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
Isoform_10961_34	chr10	-	179	1	Intergenic	novelGene_785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACACTTCCTGATGCT	NA	False	NA	NA	False	NA	NA	NA	32680280	32680101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_32680100_32680300
Isoform_109610_12	chr2	+	4328	5	FSM	ENSMUSG00000001999.16	ENSMUST00000142861.2	1460	5	28	-2896	0	417	multi-exon	FALSE	canonical	3	72	junction_1	50.701947694344	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATATTGTGAGTCGA	2237	False	NA	NA	False	NA	NA	NA	126912612	126932686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764
Isoform_109611_13	chr2	+	1032	6	NIC	ENSMUSG00000001999.16	novel	772	7	NA	NA	1	423	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	66.545022353291	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGAGTCGATTTTGA	2238	False	NA	NA	False	NA	NA	NA	126912613	126932692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126932163
Isoform_109612_48	chr2	+	1122	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	31	7	5	-7	multi-exon	FALSE	canonical	3	72	junction_1	50.5988626152721	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAACGAGAATAGTGTT	2242	False	NA	NA	False	AATAAA	-13	NA	126912617	126938997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
Isoform_109617_981	chr2	+	6750	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	-6	1	-6	-1	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTCCTTAACAGTGATA	NA	False	NA	14	True	AATAAA	-16	NA	127050312	127082370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
Isoform_109618_65	chr2	+	6776	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	-32	1	-19	-1	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTCCTTAACAGTGATA	NA	False	NA	14	True	AATAAA	-16	NA	127050286	127082370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
Isoform_109694_31	chr2	+	4439	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	24	348	24	-348	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCCTGTAGTCTTCCT	2358	False	NA	7	True	AATAAA	-20	NA	127089851	127102679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
Isoform_109696_152	chr2	+	4397	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	67	347	2	-347	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGTAGTCTTCCTG	2401	False	NA	8	True	AATAAA	-21	NA	127089894	127102680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
Isoform_109699_6	chr2	+	4784	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	23	4	23	-4	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGCTGTTTCCGGTCTA	2357	False	NA	6	True	AATAAA	-11	NA	127089850	127103023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
Isoform_10970_6	chr10	+	191	1	Intergenic	novelGene_787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAGGCAGTGGTAACAC	NA	False	NA	NA	False	NA	NA	NA	33588534	33588725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_33588500_33588700
Isoform_109700_25	chr2	+	4079	3	FSM	ENSMUSG00000034850.16	ENSMUST00000174288.2	842	3	2	-3239	2	-347	multi-exon	FALSE	canonical	2	7	junction_1	67.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGTAGTCTTCCTG	2401	False	NA	8	True	AATAAA	-21	NA	127089894	127102680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127090005_127097924_127098090_127098876
Isoform_109702_37	chr2	+	4804	3	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	2	-347	intron_retention	FALSE	canonical	3	85	junction_1	28.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGTAGTCTTCCTG	2401	False	NA	8	True	AATAAA	-21	NA	127089894	127102680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_127090730_127097924_127098090_127098876
Isoform_109703_8	chr2	+	5149	3	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	2	-2	intron_retention	FALSE	canonical	3	85	junction_1	28.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGTTTCCGGTCTACT	2401	False	NA	8	True	AATAAA	-13	NA	127089894	127103025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_127090730_127097924_127098090_127098876
Isoform_109704_1047	chr2	+	3117	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	0	-1	0	1	multi-exon	FALSE	canonical	3	326	junction_5	27.592515992122	1047	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGAGTGTTCATTTCTG	NA	False	NA	10	True	AATAAA	-17	NA	127112148	127140853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
Isoform_10971_46	chr10	+	169	1	Intergenic	novelGene_788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAATATGTAAACG	NA	False	NA	NA	False	NA	NA	NA	33833392	33833561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_33833400_33833600
Isoform_109722_3	chr2	+	1698	4	FSM	ENSMUSG00000027368.7	ENSMUST00000028846.7	1617	4	-93	12	-93	-12	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGCAGTACCACATT	NA	False	NA	NA	False	AATAAA	-17	NA	127177985	127180284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127178558_127178696_127178819_127179168_127179389_127179500
Isoform_109723_160	chr2	+	2642	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.2349702772765	160	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAGTACATGTCCAA	4985	False	NA	13	True	AATAAA	-24	NA	127267102	127278011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127267142_127269161_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_109725_5	chr2	+	2774	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-29	118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.2349702772765	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAACTCTGAGAGAA	4972	False	NA	NA	False	ACTAAA	-15	NA	127267089	127278130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127267142_127269161_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_109726_59	chr2	+	2654	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.983674953575	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAGTACATGTCCAA	4970	False	NA	13	True	AATAAA	-24	NA	127267087	127278011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127267142_127269161_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_109727_52	chr2	+	2645	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.4496247056154	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAGTACATGTCCAA	4985	False	NA	13	True	AATAAA	-24	NA	127267102	127278011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127267142_127269161_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_109737_48	chr2	+	2646	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	48.8950470250594	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAGTACATGTCCAA	4970	False	NA	13	True	AATAAA	-24	NA	127267087	127278011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_109738_7	chr2	+	2759	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-17	126	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	48.8950470250594	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTGAGAGAAAATTTATT	4984	False	NA	NA	False	ACTAAA	-23	NA	127267101	127278138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_109739_14	chr2	+	2642	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	56.7243004232172	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4970	False	NA	12	True	AATAAA	-23	NA	127267087	127278010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_109740_18	chr2	+	2651	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-32	0	at_least_one_novel_splicesite	TRUE	canonical	3	44	junction_1	57.181931085181	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4969	False	NA	14	True	AATAAA	-25	NA	127267086	127278012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_109741_7	chr2	+	2623	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	63.6951711665176	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4992	False	NA	12	True	AATAAA	-23	NA	127267109	127278010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_109752_1354	chr2	+	1446	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	190	2845	-7	129	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	4157	False	NA	25	True	AATAAA	-22	NA	127429331	127445904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_109753_213	chr2	+	1620	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	16	2845	16	129	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	3983	False	NA	25	True	AATAAA	-22	NA	127429157	127445904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_109754_105	chr2	+	4286	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	193	2	-4	-2	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTTCCAATAACTTG	4160	False	NA	5	True	AATAAA	-16	NA	127429334	127448747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_109758_21	chr2	+	4331	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	193	-43	-4	43	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCCTTGAGAGCAAGG	4160	False	NA	50	True	AATAAA	-18	NA	127429334	127448792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_109759_22	chr2	+	4473	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	7	1	7	-1	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTTCCAATAACTTGG	3974	False	NA	6	True	AATAAA	-17	NA	127429148	127448748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_109762_27	chr2	+	3178	11	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	-4	129	intron_retention	FALSE	canonical	3	1110	junction_4	153.534654068715	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	4160	False	NA	25	True	AATAAA	-22	NA	127429334	127445904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_109765_21	chr2	+	1501	12	NIC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-87	130	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	397.120336904912	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGGTATATAGCTGT	7099	False	NA	26	True	AATAAA	-23	NA	127432273	127445905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_127432402_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_10977_15	chr10	-	178	1	Intergenic	novelGene_789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	34044610	34044432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_34044400_34044600
Isoform_109773_29	chr2	+	2781	19	NIC	ENSMUSG00000027380.11	novel	531	6	NA	NA	-86	8	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	2.77999911182151	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGCGGAAATGAATTTC	NA	False	NA	NA	False	AATAAA	-26	NA	127680709	127965801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_127680903_127691112_127691210_127709202_127709287_127713181_127713269_127714029_127714129_127719663_127719779_127720676_127720764_127722345_127722419_127726325_127726459_127753349_127753385_127814451_127814569_127820592_127820747_127851996_127852087_127876732_127876843_127886263_127886376_127917766_127917855_127928278_127928350_127947596_127947699_127964867
Isoform_109774_4	chr2	+	2418	19	NIC	ENSMUSG00000027380.11	novel	531	6	NA	NA	-108	-12	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	2.77999911182151	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATCAAAACA	NA	False	NA	NA	False	NA	NA	NA	127680687	127965416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_127680903_127691112_127691210_127709202_127709287_127713181_127713269_127714029_127714129_127719663_127719779_127720676_127720764_127722345_127722419_127726325_127726459_127753349_127753385_127814451_127814569_127820592_127820747_127851996_127852087_127876732_127876843_127886263_127886376_127917766_127917855_127928278_127928350_127947596_127947699_127964867
Isoform_109775_6	chr2	+	5030	4	FSM	ENSMUSG00000027381.17	ENSMUST00000110341.9	5036	4	5	1	4	-1	multi-exon	FALSE	canonical	3	10	junction_1	11.2644968324772	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTGTTCGATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	127967963	128004466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150
Isoform_109776_3	chr2	+	2314	4	FSM	ENSMUSG00000027381.17	ENSMUST00000129206.2	974	4	10	-1350	10	0	multi-exon	FALSE	canonical	1	2	junction_3	12.684198393627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGACTGCCTTTCCTA	NA	False	NA	NA	False	AATAAA	-18	NA	127969504	127973415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_127969733_127970539_127970677_127970844_127970935_127971556
Isoform_109777_3	chr2	+	2089	4	NNC	ENSMUSG00000027381.17	novel	974	4	NA	NA	19	1154	intron_retention	FALSE	non_canonical	0	0	junction_1	15.9234278833282	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTCTGCCTGCTTTGCT	NA	False	NA	NA	False	AGTAAA	-17	NA	127969513	128001516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127969733_127970540_127970935_127989004_127989115_128000150
Isoform_109779_10	chr2	+	4507	19	FSM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	-91	-114	-91	114	multi-exon	FALSE	canonical	2	5	junction_3	3.05302925867424	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCAGGTTTGCCTTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	128540784	128644928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
Isoform_109780_3	chr2	+	4695	19	FSM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	-128	-265	-128	265	multi-exon	TRUE	canonical	2	5	junction_3	3.05302925867424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTGTGTTCCACATGC	NA	False	NA	NA	False	AATAAA	-12	NA	128540747	128645079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
Isoform_109783_15	chr2	+	4611	19	NNC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	41.8620603741076	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128660232	128696180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128681067_128681139_128683153_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
Isoform_109785_198	chr2	+	4599	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	22	-2521	22	-1	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128660244	128696180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
Isoform_109786_7	chr2	+	4809	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	-187	-2522	-2	0	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTCCTGGGATTATC	NA	False	NA	9	True	AATAAA	-20	NA	128660035	128696181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
Isoform_10979_8	chr10	-	177	1	Intergenic	novelGene_791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	34129967	34129790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_34129800_34130000
Isoform_109791_7	chr2	+	5791	18	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	22	-3	intron_retention	FALSE	canonical	1	36	junction_11	25.8501136110158	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATTGTTTCCTGGGATT	NA	False	NA	6	True	AATAAA	-17	NA	128660244	128696178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128688720_128690924_128690978_128692223_128692255_128693203
Isoform_109795_8	chr2	+	4892	12	FSM	ENSMUSG00000042851.18	ENSMUST00000110320.9	4916	12	24	0	17	0	multi-exon	FALSE	non_canonical	1	6	junction_7	5.58036700117193	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGACTGGTTCTATAACAG	6956	False	NA	4	True	AATAAA	-18	NA	128809345	128860483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128809757_128833010_128833192_128835078_128835202_128839524_128839793_128844061_128844199_128847915_128848033_128848632_128848745_128852335_128852446_128853586_128853841_128856255_128856759_128857319_128857554_128858041
Isoform_109798_6	chr2	+	1832	6	ISM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	39	6499	-4	3	5prime_fragment	FALSE	canonical	3	70	junction_4	9.64157663455516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTCAGTCCTCCATC	NA	False	NA	NA	False	ATTAAA	-17	NA	128907900	128931704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913
Isoform_10980_957	chr10	+	2660	1	FSM	ENSMUSG00000047514.7	ENSMUST00000061372.7	3086	1	37	389	37	-389	mono-exon	FALSE	NA	NA	NA	NA	NA	957	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTTTTTTTTTTTTT	NA	False	NA	17	True	AATAAA	-18	NA	34158222	34160882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_34158200_34160900
Isoform_109801_3	chr2	+	4528	7	FSM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	39	0	-4	0	multi-exon	FALSE	canonical	3	70	junction_4	11.1118055338555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTGGTCCTCTTAC	NA	False	NA	29	True	ATTAAA	-23	NA	128907900	128938203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
Isoform_109803_6	chr2	+	1953	6	NIC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	1	-2534	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	33.4687914332143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATCTTACTTTACTTA	NA	False	NA	NA	False	AAAACA	-13	NA	128907862	128935669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_128908224_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
Isoform_109806_790	chr2	+	3987	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	12	-1	12	1	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128942926	128968515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
Isoform_109824_13	chr2	+	3895	3	ISM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	116	22	12	-22	intron_retention	FALSE	canonical	3	556	junction_1	69.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTTGGAGACCTCC	3941	False	NA	23	True	NA	NA	NA	128971735	128976032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_128971778_128972097_128972239_128972320
Isoform_109825_236	chr2	+	1183	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	116	26	12	-26	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTATGGCTTGGAGAC	3941	False	NA	19	True	NA	NA	NA	128971735	128976028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
Isoform_109827_50	chr2	+	565	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	87	673	-17	-19	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGCCTTCAGTATTGAA	3912	False	NA	21	True	AATAAA	-25	NA	128971706	128975381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
Isoform_109829_23	chr2	+	1333	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	-32	24	-32	-24	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATGGCTTGGAGACCT	3793	False	NA	21	True	NA	NA	NA	128971587	128976030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
Isoform_109833_19	chr2	+	5394	11	NIC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	19	junction_5	173.636430509268	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTGTGCTTT	NA	False	NA	16	True	AATAAA	-18	NA	129040720	129053530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
Isoform_109834_20	chr2	+	3332	12	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	0	1	intron_retention	FALSE	canonical	2	9	junction_6	191.197833591932	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTGTGCTTT	NA	False	NA	16	True	AATAAA	-18	NA	129040720	129053530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129046225_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
Isoform_109835_664	chr2	+	3274	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	37	5	0	2	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCTTGTGCTTTT	NA	False	NA	17	True	AATAAA	-19	NA	129040720	129053531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
Isoform_109836_42	chr2	+	3367	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	-56	5	-56	2	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCTTGTGCTTTT	NA	False	NA	17	True	AATAAA	-19	NA	129040627	129053531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
Isoform_109865_30	chr2	+	3644	9	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	29.9934888767546	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGGGGTGTTCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	129434750	129474147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_129434813_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_109866_4	chr2	+	3643	9	NIC	ENSMUSG00000037902.19	novel	3824	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	41.1063787629122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129434764	129474148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_129434813_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
Isoform_109869_16	chr2	+	3788	9	FSM	ENSMUSG00000037902.19	ENSMUST00000179001.8	3812	9	28	-4	2	-4	multi-exon	FALSE	canonical	3	26	junction_1	29.9934888767546	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTTGGGGGTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	129434786	129474144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129434996_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_109871_34	chr2	+	4061	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	-83	4	-73	-4	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTTGGGGGTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	129435041	129474144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_109873_53	chr2	+	3623	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	355	4	-2	-4	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTTGGGGGTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	129435479	129474144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_109881_29	chr2	+	4319	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	-338	1	2	-1	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGGGGTGTTCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	129434786	129474147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_109885_7	chr2	+	3638	8	FSM	ENSMUSG00000037902.19	ENSMUST00000049262.14	3644	8	5	1	-2	-1	multi-exon	FALSE	canonical	3	16	junction_7	35.4193536395697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGGGGTGTTCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	129435479	129474147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
Isoform_109886_5	chr2	+	4073	8	FSM	ENSMUSG00000037902.19	ENSMUST00000049262.14	3644	8	-431	2	-71	-2	multi-exon	FALSE	canonical	3	16	junction_7	35.4193536395697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTGGGGGTGTTCCA	NA	False	NA	NA	False	AATAAA	-18	NA	129435043	129474146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
Isoform_109887_31	chr2	+	2943	6	FSM	ENSMUSG00000037902.19	ENSMUST00000160276.2	876	6	-24	-2043	21	-1	multi-exon	FALSE	canonical	3	15	junction_2	39.9729908813439	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGGGGTGTTCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	129435508	129474147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_109888_16	chr2	+	3171	6	FSM	ENSMUSG00000037902.19	ENSMUST00000160276.2	876	6	-254	-2041	154	-3	multi-exon	FALSE	canonical	3	15	junction_2	39.9729908813439	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTTGGGGGTGTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	129435278	129474145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_109889_4	chr2	+	3408	6	FSM	ENSMUSG00000037902.19	ENSMUST00000160276.2	876	6	-491	-2041	-73	-3	multi-exon	FALSE	canonical	3	15	junction_2	39.9729908813439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTTGGGGGTGTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	129435041	129474145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_109895_97	chr2	+	6247	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-56	-3309	-56	-4	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGTTTTGTGATT	6175	False	NA	30	True	AATAAA	-37	NA	129642380	129674203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
Isoform_109897_12	chr2	+	6351	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-162	-3307	-162	-6	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGAGTGTTTTGTGA	6069	False	NA	28	True	AATAAA	-35	NA	129642274	129674201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
Isoform_10990_24	chr10	-	179	1	Intergenic	novelGene_792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAAAAAGAAGATTT	9152	False	NA	NA	False	NA	NA	NA	34169426	34169247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_34169200_34169400
Isoform_109903_32	chr2	+	5495	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	-56	6	-56	-6	multi-exon	FALSE	canonical	3	29	junction_2	55	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGAGTGTTTTGTGA	6175	False	NA	28	True	AATAAA	-35	NA	129642380	129674201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129642767_129643323_129643925_129669693
Isoform_109904_6	chr2	+	5602	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	-165	8	-165	-8	multi-exon	FALSE	canonical	3	29	junction_2	55	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAATGAGTGTTTTGT	6066	False	NA	26	True	AATAAA	-33	NA	129642271	129674199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_129642767_129643323_129643925_129669693
Isoform_10992_16	chr10	+	3867	1	FSM	ENSMUSG00000039485.9	ENSMUST00000047935.8	3879	1	8	4	8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATGCTGTCTGGGTGA	NA	False	NA	NA	False	AATAAA	-3	NA	34173445	34177312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_34173400_34177300
Isoform_109924_183	chr2	+	2340	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	433	junction_11	590.287953263994	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332
Isoform_109929_60	chr2	+	1975	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	803.725630354594	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
Isoform_109931_70	chr2	+	2012	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_12	786.810487382798	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTATGTGTGTATTTTG	NA	False	NA	24	True	AATAAA	-13	NA	130116365	130121226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
Isoform_109934_2116	chr2	+	1856	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	16	5	0	1	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	2116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
Isoform_109935_99	chr2	+	1888	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	-16	5	-16	1	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116333	130121228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
Isoform_10994_6	chr10	+	176	1	Intergenic	novelGene_793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	34872574	34872750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_34872600_34872800
Isoform_109980_46	chr2	+	2888	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_7	268.766511120712	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075
Isoform_109986_57	chr2	+	2282	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_7	253.395508939321	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120816
Isoform_109999_42	chr2	+	2679	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1993	junction_1	211.243548385966	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119891_130120075_130120211_130120816
Isoform_1100_1266	SIRV6	+	1087	9	FSM	SIRV6A	SIRV605	1088	9	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_4	8239.38325968637	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1131	11331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
Isoform_11001_545	chr10	-	3200	1	FSM	ENSMUSG00000063953.4	ENSMUST00000080898.4	3218	1	2	16	2	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	545	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	35587886	35584686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_35584700_35587900
Isoform_110036_921	chr2	+	2630	24	FSM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	-7	538	-7	-3	multi-exon	FALSE	canonical	0	0	junction_15	83.6383654878219	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266277	130285651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
Isoform_110037_36	chr2	+	2624	24	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	107.960872979603	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266274	130285651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
Isoform_110039_71	chr2	+	2725	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_14	85.518025261509	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTGTATGCTGTCT	NA	False	NA	20	True	AATAAA	-20	NA	130266273	130285653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
Isoform_110041_15	chr2	+	2757	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	1	-3	intron_retention	FALSE	canonical	3	154	junction_14	56.5337060288406	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266259	130285651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
Isoform_110055_298	chr2	+	2910	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	5	2410	5	-309	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGATTGTTCCTTG	NA	False	NA	28	True	AATGAA	-17	NA	130292202	130395634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
Isoform_110056_75	chr2	+	3220	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	5	2100	5	1	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCGGTCCCTTTGTCTT	NA	False	NA	13	True	AATAAA	-21	NA	130292202	130395944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
Isoform_110061_564	chr2	+	977	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	0	3301	0	0	multi-exon	FALSE	canonical	3	506	junction_2	32.273139846559	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	385	False	NA	14	True	NA	NA	NA	130405661	130407314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
Isoform_110063_89	chr2	+	1057	3	FSM	ENSMUSG00000037740.9	ENSMUST00000046149.9	1057	3	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_1	21	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	385	False	NA	14	True	NA	NA	NA	130405661	130407314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130405911_130406000_130406352_130406857
Isoform_110065_682	chr2	+	1196	8	FSM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	193	1	-2	-1	multi-exon	TRUE	canonical	3	338	junction_5	87.1842992792643	682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTCTGTCTTGAGTT	5428	False	NA	17	True	AATAAA	-17	NA	130509722	130523533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
Isoform_110068_4	chr2	+	5161	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-54	3638	-54	-3638	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATAGAAACTTGATTAAT	NA	False	NA	14	True	TATAAA	-20	NA	130748360	130868615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
Isoform_110070_44	chr2	+	5130	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-18	3633	-18	-3633	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACTTGATTAATTTTAA	NA	False	NA	19	True	TATAAA	-25	NA	130748396	130868620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
Isoform_110071_4	chr2	+	4918	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-70	3897	-70	-3897	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCATATCAAAGTATAATTG	NA	False	NA	NA	False	NA	NA	NA	130748344	130868356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
Isoform_110072_17	chr2	+	8754	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-18	9	-18	-9	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGCGTGCGTTTCG	NA	False	NA	10	True	AATAAA	-13	NA	130748396	130872244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
Isoform_110076_15	chr2	+	3134	16	FSM	ENSMUSG00000027330.17	ENSMUST00000028804.15	3089	16	-44	-1	-44	-1	multi-exon	FALSE	canonical	3	45	junction_7	16.6951756171922	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTGTTTGTTATGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	131028824	131040416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
Isoform_110077_108	chr2	+	3090	16	FSM	ENSMUSG00000027330.17	ENSMUST00000028804.15	3089	16	0	-1	0	-1	multi-exon	FALSE	canonical	3	45	junction_7	16.6951756171922	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTGTTTGTTATGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	131028868	131040416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
Isoform_110078_113	chr2	+	3002	15	FSM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	1	1	1	-1	multi-exon	FALSE	canonical	3	36	junction_6	17.0899481137484	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTGTTTGTTATGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	131028878	131040416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
Isoform_110081_64	chr2	+	1586	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	-65	0	5	0	multi-exon	FALSE	canonical	3	39	junction_2	10	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052294	131055434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131052602_131053182_131053394_131054366
Isoform_110082_49	chr2	+	1375	2	FSM	ENSMUSG00000068264.12	ENSMUST00000134086.2	868	2	5	-512	5	0	multi-exon	FALSE	canonical	3	35	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052294	131055434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131052602_131054366
Isoform_110083_3	chr2	+	3282	4	NNC	ENSMUSG00000068264.12	novel	1521	3	NA	NA	13	1963	intron_retention	FALSE	non_canonical	0	0	junction_3	15.121728296285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCACAGTGTCTTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	131052302	131057397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_131052602_131054366_131055364_131055389_131056265_131056286
Isoform_110084_5	chr2	+	2135	3	NNC	ENSMUSG00000068264.12	novel	1521	3	NA	NA	11	0	intron_retention	FALSE	non_canonical	3	28	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052300	131055434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_131053394_131054366_131055364_131055389
Isoform_110086_529	chr2	+	2848	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	17	2	17	1	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGAGTTCCAAATT	7281	False	NA	12	True	ATTAAA	-17	NA	131076003	131089943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_110087_11	chr2	+	4942	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	-7	-2068	-3	2068	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCATTGAATATTTATTA	7257	False	NA	NA	False	NA	NA	NA	131075979	131092013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_110088_10	chr2	+	4176	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	-1311	2	-1307	1	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGAGTTCCAAATT	5953	False	NA	12	True	ATTAAA	-17	NA	131074675	131089943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_110089_14	chr2	+	2693	6	NIC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	72.2744768227346	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGAGTTCCAAATT	7258	False	NA	12	True	ATTAAA	-17	NA	131075980	131089943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_131076048_131080655_131080831_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_110090_32	chr2	+	2962	8	NNC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	77.1359785293054	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGAGTTCCAAATT	7281	False	NA	12	True	ATTAAA	-17	NA	131076003	131089943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_131076048_131079346_131079461_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_110091_62	chr2	+	3050	7	FSM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	4	3	4	0	multi-exon	FALSE	canonical	3	32	junction_1	57.107111835762	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	7306	False	NA	11	True	ATTAAA	-16	NA	131076028	131089942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_110096_31	chr2	+	751	2	ISM	ENSMUSG00000037514.19	ENSMUST00000131779.8	1304	5	0	9097	0	-9097	5prime_fragment	FALSE	canonical	3	620	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCATTTCTAATGGAGCT	864	False	NA	2	True	ATTAAA	-14	NA	131104414	131116260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_131104736_131115830
Isoform_110097_33	chr2	+	1631	7	FSM	ENSMUSG00000037514.19	ENSMUST00000184105.9	1398	7	-29	-204	1	1	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	865	False	NA	14	True	NA	NA	NA	131104415	131138612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_110099_17	chr2	+	4126	7	FSM	ENSMUSG00000037514.19_ENSMUSG00000086329.2	ENSMUST00000184105.9	1398	7	-29	-2699	1	1	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTTGCTTGCATGT	865	False	NA	4	True	AATAAA	-18	NA	131104415	131141107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_1101_613	SIRV6	+	1527	10	FSM	SIRV6A	SIRV612	1528	10	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_4	7772.9807349673	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1088	11825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
Isoform_110102_10	chr2	+	1377	6	NIC	ENSMUSG00000037514.19	novel	1398	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	215.37817902471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	864	False	NA	13	True	NA	NA	NA	131104414	131138611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_131104736_131115830_131116041_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_110104_19	chr2	+	1200	5	FSM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	-72	2494	1	1	multi-exon	FALSE	canonical	0	0	junction_2	240.508315864546	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	865	False	NA	14	True	NA	NA	NA	131104415	131138612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131104736_131115830_131116041_131129393_131129518_131135318_131135445_131138192
Isoform_110105_15	chr2	+	3694	5	FSM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	-72	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	240.508315864546	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	865	False	NA	3	True	AATAAA	-17	NA	131104415	131141106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131104736_131115830_131116041_131129393_131129518_131135318_131135445_131138192
Isoform_110109_135	chr2	+	4268	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-4	2	1	0	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	865	False	NA	3	True	AATAAA	-17	NA	131104415	131141106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_110110_311	chr2	+	1774	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-4	2496	1	1	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	865	False	NA	14	True	NA	NA	NA	131104415	131138612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_110113_9	chr2	+	1519	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	205.341082104873	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTGGAGGTCATCTT	864	False	NA	12	True	NA	NA	NA	131104414	131138610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_131104736_131115830_131116184_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_110114_9	chr2	+	4014	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	205.341082104873	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	865	False	NA	3	True	AATAAA	-17	NA	131104415	131141106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_131104736_131115830_131116184_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_110115_36	chr2	+	1344	5	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	217.555165417877	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	864	False	NA	14	True	NA	NA	NA	131104414	131138612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_131104736_131115830_131116184_131129393_131129518_131135318_131135445_131138192
Isoform_110118_19	chr2	+	3839	5	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	217.555165417877	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	865	False	NA	5	True	AATAAA	-19	NA	131104415	131141108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_131104736_131115830_131116184_131129393_131129518_131135318_131135445_131138192
Isoform_110119_15	chr2	+	3715	4	FSM	ENSMUSG00000037514.19_ENSMUSG00000086329.2	ENSMUST00000145904.2	558	4	-300	-2857	1	0	multi-exon	FALSE	canonical	3	31	junction_2	262.90725022757	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	865	False	NA	5	True	AATAAA	-19	NA	131104415	131141108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131104736_131115830_131116184_131135318_131135445_131138192
Isoform_110120_18	chr2	+	1219	4	FSM	ENSMUSG00000037514.19	ENSMUST00000145904.2	558	4	-300	-361	1	1	multi-exon	FALSE	canonical	3	31	junction_2	262.90725022757	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	865	False	NA	14	True	NA	NA	NA	131104415	131138612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131104736_131115830_131116184_131135318_131135445_131138192
Isoform_110123_7	chr2	+	1748	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110180.2	1617	8	-129	-2	-59	2	multi-exon	FALSE	canonical	3	8	junction_5	45.6709616134134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	17	True	AATAAA	-18	NA	131333783	131367089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131362567_131362974_131363092_131363978_131364140_131366662
Isoform_110124_90	chr2	+	2224	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	-57	3	-37	2	multi-exon	FALSE	canonical	3	32	junction_6	48.183746942177	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	17	True	AATAAA	-18	NA	131333805	131367089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366163_131366254_131366662
Isoform_110125_243	chr2	+	2136	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	125	9	-34	2	multi-exon	FALSE	canonical	3	113	junction_6	10.8269211792745	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTCTCTCCTCAGTT	NA	False	NA	22	True	AATAAA	-23	NA	131333808	131367094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
Isoform_110127_11	chr2	+	1389	6	FSM	ENSMUSG00000027333.19	ENSMUST00000110179.9	1320	6	-72	3	-52	2	multi-exon	FALSE	canonical	3	15	junction_4	49.3128786423993	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	17	True	AATAAA	-18	NA	131333790	131367089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131363978_131364140_131366662
Isoform_110129_4	chr2	+	2348	7	NIC	ENSMUSG00000027333.19	novel	2170	8	NA	NA	-24	-4	intron_retention	FALSE	canonical	3	32	junction_5	50.3843560376962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCACGCTCCTTTGCTTC	NA	False	NA	11	True	AATAAA	-12	NA	131333818	131367083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131363092_131363978_131364140_131366163_131366254_131366662
Isoform_110130_10	chr2	+	2262	6	FSM	ENSMUSG00000027333.19	ENSMUST00000151627.8	2223	6	-40	1	-20	-1	multi-exon	FALSE	canonical	3	113	junction_5	11.7234807118023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGCTTCTCTCCTCA	NA	False	NA	19	True	AATAAA	-20	NA	131333822	131367091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131363092_131363978_131364140_131366662
Isoform_110131_146	chr2	+	2137	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	46	1	32	-1	multi-exon	FALSE	canonical	3	54	junction_2	0.5	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCGGGGTTTGTTC	NA	False	NA	6	True	ATTAAA	-16	NA	131751893	131780348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131751924_131754114_131754213_131778339
Isoform_110133_9	chr2	+	3164	2	FSM	ENSMUSG00000027338.17	ENSMUST00000110172.9	3176	2	0	12	0	-12	multi-exon	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATACAGACAGCCACGGT	NA	False	NA	NA	False	NA	NA	NA	131792781	131798038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131792836_131794928
Isoform_110135_3	chr2	+	1956	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110170.8	1969	3	1	12	0	-12	multi-exon	FALSE	canonical	1	1	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATACAGACAGCCACGGT	NA	False	NA	NA	False	NA	NA	NA	131792781	131798038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131792836_131794928_131795503_131796710
Isoform_110136_11	chr2	+	1938	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110171.9	1938	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGTGTCTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	131792781	131798050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131792836_131794928_131795503_131796740
Isoform_110137_3	chr2	+	1929	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110169.2	1918	3	-14	3	-14	-3	multi-exon	FALSE	canonical	1	3	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCACGGTGTCTGGTGG	NA	False	NA	NA	False	NA	NA	NA	131792942	131798047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_131792991_131794928_131795503_131796740
Isoform_110138_4	chr2	+	535	2	FSM	ENSMUSG00000087377.2	ENSMUST00000124336.2	921	2	-19	405	-19	-405	multi-exon	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGAATGTCCGGTTAAT	526	False	NA	NA	False	NA	NA	NA	132095257	132102848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_132095450_132102505
Isoform_110139_3	chr2	+	2083	4	NNC	ENSMUSG00000058793.15	novel	1247	4	NA	NA	68	-5	intron_retention	TRUE	non_canonical	0	0	junction_3	178.389710714741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGTTTCTGAGCCCT	5405	False	NA	NA	False	AATAAA	-11	NA	132105228	132138108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_132105418_132135164_132135302_132136303_132137730_132137777
Isoform_110140_7	chr2	+	1142	5	NNC	ENSMUSG00000058793.15	novel	1247	4	NA	NA	-40	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	185.549184854043	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTTTCTGAGCCCTT	5297	False	NA	NA	False	AATAAA	-12	NA	132105120	132138109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137723_132137770
Isoform_110143_25	chr2	+	1673	13	FSM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	59	6664	-34	58	multi-exon	FALSE	canonical	2	258	junction_5	60.9331942923286	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTCATTTTTTTTTCTT	5303	False	NA	13	True	AATGAA	-15	NA	132105126	132147306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
Isoform_110144_27	chr2	+	1585	13	FSM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	147	6664	54	58	multi-exon	FALSE	canonical	2	258	junction_5	60.9331942923286	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTCATTTTTTTTTCTT	5391	False	NA	13	True	AATGAA	-15	NA	132105214	132147306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
Isoform_110145_34	chr2	+	1406	13	FSM	ENSMUSG00000058793.15	ENSMUST00000089461.11	8073	13	2	6665	2	57	multi-exon	FALSE	canonical	2	123	junction_1	89.520132744912	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGTCATTTTTTTTTCT	NA	False	NA	12	True	AATGAA	-14	NA	132127860	132147305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
Isoform_110146_51	chr2	+	1043	3	FSM	ENSMUSG00000044991.11	ENSMUST00000061891.11	1076	3	33	0	33	0	multi-exon	FALSE	canonical	3	37	junction_1	20.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	27	True	NA	NA	NA	132528883	132592975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_132528902_132533869_132534052_132592132
Isoform_110149_8	chr2	+	1170	3	NNC	ENSMUSG00000044991.11	novel	1076	3	NA	NA	1670	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGACTCAGTCTATT	NA	False	NA	25	True	NA	NA	NA	132533872	132592973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_132534052_132572619_132572770_132592132
Isoform_11015_22	chr12	-	177	1	Intergenic	novelGene_2781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	100851213	100851036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_100851000_100851200
Isoform_110153_46	chr2	+	3468	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	3	-292	3	-10	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	132658063	132686107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
Isoform_110155_257	chr2	+	2970	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	24	185	24	-185	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTAAATTGTTTCCAT	NA	False	NA	39	True	AATAAA	-31	NA	132658084	132685630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
Isoform_110156_53	chr2	+	3170	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	10	-1	10	1	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTTCAGGTCACAAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	132658070	132685816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
Isoform_11016_5	chr10	+	263	1	Intergenic	novelGene_796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCCCCACCACACTAGCA	NA	False	NA	NA	False	NA	NA	NA	36110885	36111148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_36110900_36111100
Isoform_110165_386	chr2	+	1928	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	-3	-1	-3	1	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTGTGGTGT	1619	False	NA	14	True	AATAAA	-29	NA	132688582	132708706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
Isoform_11017_7	chr10	-	171	1	Intergenic	novelGene_797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATGATGGAA	NA	False	NA	NA	False	NA	NA	NA	36416972	36416801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_36416800_36417000
Isoform_110176_11	chr2	+	1677	5	NIC	ENSMUSG00000027357.17	novel	1772	6	NA	NA	3	-18	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	304.988012059491	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCCATGCCTTGCAC	1635	False	NA	-5	True	AATAAA	-10	NA	132688598	132708687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_132689046_132691785_132691924_132704254_132704324_132706009_132706102_132707756
Isoform_110180_7	chr2	+	1624	4	NIC	ENSMUSG00000027357.17	novel	1772	6	NA	NA	-4	-19	combination_of_known_splicesites	FALSE	canonical	3	107	junction_2	299.273564931263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCCATGCCTTGCA	1618	False	NA	-6	True	AATAAA	-9	NA	132688581	132708686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_132689046_132691785_132691924_132706009_132706102_132707756
Isoform_110185_27	chr2	+	5394	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-227	12	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	17.4713061159182	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTATTTGCTTCCACGA	NA	False	NA	14	True	AATAAA	-26	NA	135501246	135856525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
Isoform_110186_9	chr2	+	5613	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	94	9	combination_of_known_junctions	TRUE	canonical	3	68	junction_1	17.4713061159182	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGAGTATTTGCTTCCA	NA	False	NA	11	True	AATAAA	-23	NA	135501024	135856522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
Isoform_110190_22	chr2	+	5456	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-20	5	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	18.1510475266798	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTACCAGAGTATTTGCT	NA	False	NA	7	True	AATAAA	-19	NA	135501453	135856518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
Isoform_110191_9	chr2	+	5439	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_19	24.1549275783594	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACCAGAGTATTTGCTT	NA	False	NA	8	True	AATAAA	-20	NA	135501474	135856519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
Isoform_110192_3	chr2	+	2964	11	FSM	ENSMUSG00000074771.11	ENSMUST00000121717.2	2875	11	-91	2	-23	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAAGTGTCCTGGGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	136374108	136397883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_136374392_136375572_136375745_136379005_136379398_136386502_136386703_136387630_136387781_136388737_136388862_136391632_136392456_136394235_136394463_136395541_136395703_136396605_136396744_136397589
Isoform_110193_5	chr2	+	5070	8	NIC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	7.17990392750232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTTTGTTGTGCAAT	9356	False	NA	13	True	AATAAA	-21	NA	136733132	136913868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_136733310_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
Isoform_110194_3	chr2	+	2865	8	NIC	ENSMUSG00000027281.17	novel	4906	8	NA	NA	-30	-29	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	10.1337987719818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTGATTATTGTGACCA	9721	False	NA	NA	False	NA	NA	NA	136733497	136911669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_136733582_136747462_136747521_136788961_136789170_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
Isoform_110195_5	chr2	+	4947	8	NIC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	6.90164133096066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTTTGTTGTGCAATT	9752	False	NA	14	True	AATAAA	-22	NA	136733528	136913869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_136733582_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
Isoform_110196_5	chr2	+	4862	7	NIC	ENSMUSG00000027281.17	novel	4906	8	NA	NA	-35	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	8.41955396021006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTTTGTTGTGCAATT	9716	False	NA	14	True	AATAAA	-22	NA	136733492	136913869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_136733582_136747462_136747521_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
Isoform_110198_5	chr2	+	5638	8	FSM	ENSMUSG00000027281.17	ENSMUST00000099311.9	5089	8	-552	3	8	-3	multi-exon	FALSE	canonical	3	13	junction_4	4.68170560233541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAGTTTGTTGTGCAA	9759	False	NA	12	True	AATAAA	-20	NA	136733535	136913867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
Isoform_11020_35	chr10	+	178	1	Intergenic	novelGene_798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAGAAAGAAA	6407	False	NA	NA	False	NA	NA	NA	37003459	37003637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_37003500_37003600
Isoform_110201_87	chr2	+	4591	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	65	1	-32	-1	multi-exon	FALSE	canonical	3	50	junction_1	2.87228132326901	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGCTTTTTTAGTATT	NA	False	NA	15	True	AATAAA	-16	NA	138098549	138129341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
Isoform_110203_36	chr2	+	4682	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	-26	1	-26	-1	multi-exon	FALSE	canonical	3	50	junction_1	2.87228132326901	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGCTTTTTTAGTATT	NA	False	NA	15	True	AATAAA	-16	NA	138098458	138129341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
Isoform_110205_16	chr2	+	1151	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	16	-1	16	1	multi-exon	FALSE	canonical	3	226	junction_10	17.7042367810646	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTGAAGCAAGGTGC	NA	False	NA	11	True	AATAAA	-22	NA	140012584	140045610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
Isoform_110207_49	chr2	+	1063	4	FSM	ENSMUSG00000068205.15	ENSMUST00000043836.8	3552	4	24	2465	-1	-6	multi-exon	FALSE	canonical	3	66	junction_3	7.40870359029762	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTATGATTCCTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	140237378	140262409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
Isoform_110209_405	chr2	+	941	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	16	1104	-6	-1104	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTATTGTCCTATCAT	2004	False	NA	22	True	AATAAA	-22	NA	142904974	142913669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
Isoform_110212_20	chr2	+	1252	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	14	795	-8	-795	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGCTTTTTTCAGAAG	2002	False	NA	18	True	AATAAA	-19	NA	142904972	142913978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
Isoform_110220_162	chr2	+	1736	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	175	0	175	0	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143757414	143785244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
Isoform_110221_1904	chr2	+	1682	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	229	0	229	0	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	1904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143757468	143785244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
Isoform_110222_44	chr2	+	1932	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143757218	143785244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
Isoform_110234_136	chr2	+	2055	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	252	1	15	-1	multi-exon	FALSE	canonical	3	74	junction_1	188.862383761299	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	13	True	AATAAA	-15	NA	144112834	144122435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_11024_8	chr10	-	795	1	ISM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	3309	1442	3309	-1442	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTGTGTTTTTTTATG	NA	False	NA	NA	False	AATAAA	-19	NA	37011607	37010812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_37010800_37011600
Isoform_110240_14	chr2	+	1132	3	ISM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	92	4432	51	-3721	5prime_fragment	FALSE	canonical	3	360	junction_1	74	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	144112911	144118715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_144112993_144113834_144114405_144118234
Isoform_110243_120	chr2	+	2040	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	88	712	47	-1	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	13	True	AATAAA	-15	NA	144112907	144122435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_110244_632	chr2	+	1981	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	147	712	106	-1	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	13	True	AATAAA	-15	NA	144112966	144122435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_110247_30	chr2	+	2696	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	147	-3	106	3	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTATTTATAGGGTGA	NA	False	NA	NA	False	AATAAA	-23	NA	144112966	144123150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_110256_40	chr2	+	2278	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	80	1	80	-1	multi-exon	FALSE	canonical	3	60	junction_1	194.922420465169	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	13	True	AATAAA	-15	NA	144112940	144122435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_110262_13	chr2	+	3975	12	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	-23	intron_retention	FALSE	canonical	1	11	junction_2	132.928800926295	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144210893	144249572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_144211078_144213524_144213714_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_110263_16	chr2	+	938	2	FSM	ENSMUSG00000098387.3	ENSMUST00000183618.3	693	2	-23	-222	-23	222	multi-exon	FALSE	canonical	3	459	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGAAATATCATCATTAT	NA	False	NA	9	True	AATAAA	-10	NA	144210892	144215863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144211078_144215110
Isoform_110265_23	chr2	+	915	2	FSM	ENSMUSG00000098387.3	ENSMUST00000183618.3	693	2	6	-228	6	228	multi-exon	FALSE	canonical	3	459	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCATCATTATTATTAT	NA	False	NA	15	True	AATAAA	-16	NA	144210921	144215869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144211078_144215110
Isoform_110266_55	chr2	+	3290	11	FSM	ENSMUSG00000027425.19	ENSMUST00000147747.8	3299	11	-12	21	-1	-20	multi-exon	FALSE	canonical	1	81	junction_2	109.46638753517	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210906	144249575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_110267_67	chr2	+	3264	11	FSM	ENSMUSG00000027425.19	ENSMUST00000147747.8	3299	11	14	21	14	-20	multi-exon	FALSE	canonical	1	81	junction_2	109.46638753517	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210932	144249575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_110270_19	chr2	+	3810	11	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	-20	intron_retention	FALSE	canonical	1	28	junction_5	120.788906775415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210893	144249575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235202_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_110271_782	chr2	+	3787	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	-9	23	-9	-22	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGGGCTGCAGCCTAG	NA	False	NA	17	True	AATAAA	-23	NA	144210893	144249573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_110275_24	chr2	+	3187	12	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	-22	combination_of_known_junctions	FALSE	canonical	1	24	junction_11	116.355113324229	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGGGCTGCAGCCTAG	NA	False	NA	17	True	AATAAA	-23	NA	144210893	144249573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542_144248632_144249231
Isoform_110278_25	chr2	+	3628	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	14	-20	intron_retention	FALSE	canonical	1	20	junction_3	128.814921304239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210932	144249575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_110295_5	chr2	+	1304	3	FSM	ENSMUSG00000083674.4	ENSMUST00000124788.2	1079	3	-229	4	-229	-4	multi-exon	FALSE	canonical	1	3	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTCAAGTGTACGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	144300970	144309710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144301321_144306398_144306495_144308852
Isoform_110296_5	chr2	+	2152	2	FSM	ENSMUSG00000027427.14	ENSMUST00000136999.2	2177	2	5	20	-1	-20	multi-exon	FALSE	canonical	3	55	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAAAATAATTAGA	626	False	NA	NA	False	NA	NA	NA	144369666	144372595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144369846_144370622
Isoform_110298_37	chr2	+	4360	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	42	1	12	-1	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGTTTCTGGTATTA	639	False	NA	7	True	GATAAA	-23	NA	144369679	144383914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
Isoform_1103_645	SIRV6	+	1537	10	FSM	SIRV6A	SIRV604	1537	10	1	-1	1	1	multi-exon	TRUE	canonical	0	0	junction_4	9140.21704229429	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACTTAGTTCAATCTTC	NA	False	NA	NA	False	NA	NA	NA	1088	11838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
Isoform_110302_1000	chr2	+	2753	20	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-4	-12	combination_of_known_junctions	FALSE	canonical	3	371	junction_1	64.9806278398403	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACTAATGCAGATT	NA	False	NA	NA	False	AATAAA	-25	NA	144398171	144432657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
Isoform_110306_530	chr2	+	2742	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	25	12	0	-12	multi-exon	FALSE	canonical	3	154	junction_1	107.06740569791	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACTAATGCAGATT	NA	False	NA	NA	False	AATAAA	-25	NA	144398200	144432657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
Isoform_110316_120	chr2	+	449	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	22	0	22	0	multi-exon	FALSE	canonical	3	228	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTGTCTTCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	144435995	144437286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144436126_144436967
Isoform_110317_375	chr2	+	1234	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	89	27	89	-27	multi-exon	FALSE	canonical	3	290	junction_5	10.373041983912	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAAATTCTGCTGTGTC	NA	False	NA	NA	False	AATAAA	-34	NA	144441905	144610651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
Isoform_110318_14	chr2	+	1274	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	55	21	55	-21	multi-exon	TRUE	canonical	3	290	junction_5	10.373041983912	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGCTGTGTCTGTTTA	NA	False	NA	NA	False	AATAAA	-40	NA	144441871	144610657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
Isoform_11032_4	chr10	-	172	1	Antisense	novelGene_ENSMUSG00000061759.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	4399759	4399587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_4399600_4399800
Isoform_110320_10	chr2	+	1140	5	NIC	ENSMUSG00000027430.13	novel	1350	6	NA	NA	83	-36	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	128.50753868937	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACTTTATTATTAAATTC	NA	False	NA	NA	False	AATAAA	-25	NA	144441899	144610642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_144442012_144459111_144459348_144477677_144477785_144588820_144588994_144610130
Isoform_110321_4	chr2	+	4733	14	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	121	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	4.12238800214593	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGTCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	145517407	145729535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_145517505_145554374_145554499_145579302_145579375_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
Isoform_110322_7	chr2	+	4658	13	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	124	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.53847895759369	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGTCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	145517410	145729535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_145517505_145554374_145554499_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
Isoform_110324_8	chr2	+	577	5	ISM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	19	670	-2	21	5prime_fragment	FALSE	canonical	3	961	junction_2	127.74681992128	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTTTGCTATTGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	145745179	145757675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453
Isoform_110326_543	chr2	+	1013	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	21	108	0	-108	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTGGAAGTTTGTT	NA	False	NA	-44	True	AGTAAA	-17	NA	145745181	145758237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
Isoform_110327_105	chr2	+	1119	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	21	2	0	-2	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGTAATCATCCCTG	NA	False	NA	29	True	TATAAA	-14	NA	145745181	145758343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
Isoform_110329_46	chr2	+	1043	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	21	108	0	-108	multi-exon	FALSE	canonical	3	102	junction_3	436.248094551713	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTGGAAGTTTGTT	NA	False	NA	-44	True	AGTAAA	-17	NA	145745181	145758237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
Isoform_11033_7	chr10	-	174	1	Intergenic	novelGene_799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGGGGTACAGAA	NA	False	NA	NA	False	NA	NA	NA	38579430	38579256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_38579300_38579400
Isoform_110331_18	chr2	+	1620	5	NIC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	-11	-109	intron_retention	FALSE	canonical	3	961	junction_2	190.755570036631	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145745202	145758236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_145745283_145750510_145750536_145753592_145754449_145757453_145757600_145757723
Isoform_110333_11	chr2	+	965	5	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	-2	-109	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	539.338657524194	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145745179	145758236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_145745283_145753616_145753684_145754312_145754449_145757453_145757600_145757723
Isoform_110336_4	chr2	+	2575	6	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	16	77659	16	3143	5prime_fragment	FALSE	canonical	3	96	junction_5	17.8146007533147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCCCTTTTATAAGTG	NA	False	NA	NA	False	NA	NA	NA	146697799	146734358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900
Isoform_110337_153	chr2	+	2159	14	FSM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	17	7	17	-2	multi-exon	FALSE	canonical	3	86	junction_6	16.1728825562271	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAGCGTCACTGTAAT	NA	False	NA	NA	False	AATAAA	-8	NA	146697800	146812010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
Isoform_110338_5	chr2	+	2079	13	NIC	ENSMUSG00000074749.11	novel	2183	14	NA	NA	-19	3	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	33.9094996522607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTAATTAGGTGTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	146697809	146812020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_146697964_146703039_146703103_146705626_146705790_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
Isoform_11034_37	chr10	-	190	1	Intergenic	novelGene_800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	38712813	38712623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_38712600_38712800
Isoform_110347_32	chr2	+	2921	28	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	40	8958	40	142	5prime_fragment	TRUE	canonical	3	956	junction_9	69.0320098312682	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCCTGTGTTTCTTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	146854955	146910962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711
Isoform_110350_1968	chr2	+	3390	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	40	4	40	-4	multi-exon	FALSE	canonical	3	956	junction_9	74.1082057489866	1968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTTGGTGTCTGGTGT	NA	False	NA	6	True	AATAAA	-18	NA	146854955	146919916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
Isoform_11038_7	chr10	+	176	1	Intergenic	novelGene_801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATTTCTGATA	NA	False	NA	NA	False	NA	NA	NA	39055394	39055570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_39055400_39055600
Isoform_110386_37	chr2	+	1070	3	FSM	ENSMUSG00000036992.11	ENSMUST00000109961.8	1116	3	45	1	20	-1	multi-exon	FALSE	canonical	3	22	junction_1	28	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATGTCTAAATCTTGAG	NA	False	NA	14	True	AATAAA	-18	NA	148514565	148517946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_148514756_148516383_148516519_148517201
Isoform_110388_18	chr2	+	2342	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	30	-1416	30	1416	multi-exon	FALSE	canonical	3	586	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCTTCATTTGTAGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	148514575	148519363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_148514756_148517201
Isoform_110389_805	chr2	+	932	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	23	1	23	-1	multi-exon	FALSE	canonical	3	586	junction_1	0	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATGTCTAAATCTTGAG	NA	False	NA	14	True	AATAAA	-18	NA	148514568	148517946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_148514756_148517201
Isoform_110396_136	chr2	+	4089	6	FSM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	142	1	-46	-1	multi-exon	FALSE	canonical	3	53	junction_1	11.7983049630021	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTCTGCTTTGTAAAA	513	False	NA	NA	False	AATAAA	-17	NA	148523084	148534868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
Isoform_110398_22	chr2	+	4079	6	NNC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	26.4423902096615	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTCTGCTTTGTAAAA	513	False	NA	NA	False	AATAAA	-17	NA	148523084	148534868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_148523136_148525523_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
Isoform_11040_8	chr10	+	173	1	Intergenic	novelGene_802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	39308018	39308191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_39308000_39308200
Isoform_110401_21	chr2	+	1963	4	FSM	ENSMUSG00000074736.11	ENSMUST00000109935.8	2050	4	35	52	-20	-52	multi-exon	FALSE	canonical	1	4	junction_1	14.290634073484	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTTGCTTACGACTTT	NA	False	NA	NA	False	NA	NA	NA	149672742	149846260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_149672846_149741337_149741896_149772824_149772963_149845096
Isoform_110403_4	chr2	+	1909	4	NIC	ENSMUSG00000074736.11	novel	620	2	NA	NA	107	-52	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	14.7044966667418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTTGCTTACGACTTT	NA	False	NA	NA	False	NA	NA	NA	149672948	149846260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_149672998_149741337_149741896_149772824_149772963_149845096
Isoform_110404_4	chr2	+	1984	4	NIC	ENSMUSG00000074736.11	novel	620	2	NA	NA	43	-41	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	14.7044966667418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGACTTTTCTTTCTGATG	NA	False	NA	NA	False	NA	NA	NA	149672884	149846271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_149672998_149741337_149741896_149772824_149772963_149845096
Isoform_110407_7	chr2	+	4922	5	NNC	ENSMUSG00000079009.9	novel	1728	4	NA	NA	2	3235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.0746772020624	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACATTAAATGCCTCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	150023676	150038434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775_150035754_150035792
Isoform_110408_4	chr2	+	2786	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	24	-13	24	13	multi-exon	FALSE	canonical	3	15	junction_1	5.35412613473634	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAGAAAAAAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	150060016	150082658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
Isoform_110410_15	chr2	+	5846	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	11	-2839	11	2839	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTAAATGCCTCGTGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	150099447	150115059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
Isoform_110412_3	chr2	+	6134	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	-2	-3114	-2	3114	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	150099434	150115334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
Isoform_110414_66	chr2	+	4126	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	57	-2024	57	2024	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAGGAGGTGTCCTGTG	NA	False	NA	5	True	NA	NA	NA	150153407	150170956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
Isoform_110419_4	chr2	+	5064	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	61	-2966	61	2966	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCATTGCATGTGTCTTT	NA	False	NA	NA	False	AATACA	-14	NA	150153411	150171898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
Isoform_11042_15	chr10	-	177	1	Intergenic	novelGene_711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGACTTCCT	NA	False	NA	NA	False	NA	NA	NA	4439303	4439126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_4439100_4439300
Isoform_110420_9	chr2	+	4064	3	NIC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	57	2023	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	56.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGAGGAGGTGTCCTGT	NA	False	NA	4	True	NA	NA	NA	150153407	150170955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_150153479_150165621_150165749_150167089
Isoform_110422_414	chr2	+	2498	14	FSM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	40	2	1	-2	multi-exon	FALSE	canonical	3	112	junction_1	18.2695141678424	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	10	True	AATAAA	-15	NA	150591001	150613593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
Isoform_110423_17	chr2	+	2535	14	FSM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	3	2	3	-2	multi-exon	FALSE	canonical	3	112	junction_1	18.2695141678424	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	10	True	AATAAA	-15	NA	150590964	150613593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
Isoform_110426_76	chr2	+	2495	14	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	38.7806759662898	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	10	True	AATAAA	-15	NA	150591001	150613593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_150591154_150594932_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
Isoform_110429_444	chr2	+	3881	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	28	0	28	0	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTATCTGCATTTCCA	NA	False	NA	23	True	ATTAAA	-23	NA	150628682	150673678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
Isoform_110433_7	chr2	+	3156	12	ISM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	28493	11	-94	-11	3prime_fragment	FALSE	canonical	3	120	junction_2	17.093810198649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGTCACTGTGGTAT	NA	False	NA	12	True	ATTAAA	-12	NA	150657147	150673667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
Isoform_110438_354	chr2	+	1073	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	0	14	0	-14	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTTTTCACAATGGGAA	2422	False	NA	9	True	AATAAA	-16	NA	150751513	150773186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
Isoform_110442_1314	chr2	+	1359	9	FSM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	3	2	3	-2	multi-exon	FALSE	canonical	3	1010	junction_3	133.71979799192	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTACCAATTCTGTTAT	NA	False	NA	17	True	NA	NA	NA	151336215	151353223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
Isoform_110445_34	chr2	+	3585	8	NIC	ENSMUSG00000027455.17	novel	1364	9	NA	NA	1	-5	intron_retention	FALSE	canonical	3	1303	junction_6	54.199179148841	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATACTACCAATTCTGT	NA	False	NA	14	True	NA	NA	NA	151336210	151353220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_151336333_151338503_151338602_151342634_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
Isoform_11045_39	chr10	-	177	1	Intergenic	novelGene_803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	39676791	39676614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_39676600_39676800
Isoform_110456_63	chr2	+	1541	5	NIC	ENSMUSG00000032966.15	novel	894	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	76	junction_4	1013.2641252408	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	24	True	AATAAA	-25	NA	151384514	151403611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401537_151402540
Isoform_110460_2151	chr2	+	1550	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	107	1	-4	-1	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	2151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	24	True	AATAAA	-25	NA	151384509	151403611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
Isoform_110462_139	chr2	+	1652	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	5	1	5	-1	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	24	True	AATAAA	-25	NA	151384407	151403611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
Isoform_110478_4	chr2	+	1383	9	FSM	ENSMUSG00000027456.9	ENSMUST00000028950.9	1399	9	16	0	16	0	multi-exon	FALSE	canonical	1	3	junction_1	9.20258115965298	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCGGTCATGAAAGTTCC	NA	False	NA	19	True	AATAAA	-19	NA	151414557	151431925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151414625_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
Isoform_110479_69	chr2	+	2692	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	-23	0	1	0	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTTGTGTGCTCAC	NA	False	NA	18	True	NA	NA	NA	151838431	151851178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_11048_6	chr10	+	301	1	Intergenic	novelGene_804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTCCAGCCTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	39854541	39854842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_39854500_39854800
Isoform_110480_126	chr2	+	2382	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	17	270	17	-234	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGGCTGTGTACACACA	NA	False	NA	15	True	ATTAAA	-19	NA	151838471	151850908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_110483_164	chr2	+	2327	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	29	234	-3	-234	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGGCTGTGTACACACA	NA	False	NA	15	True	ATTAAA	-19	NA	151841813	151850908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_110484_63	chr2	+	2355	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	1	234	1	-234	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGGCTGTGTACACACA	NA	False	NA	15	True	ATTAAA	-19	NA	151841785	151850908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_110485_69	chr2	+	2597	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	29	-36	-3	0	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTTGTGTGCTCAC	NA	False	NA	18	True	NA	NA	NA	151841813	151851178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_110486_28	chr2	+	2625	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	1	-36	1	0	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTTGTGTGCTCAC	NA	False	NA	18	True	NA	NA	NA	151841785	151851178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_110487_6	chr2	+	3850	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	-1496	236	-1496	-236	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGGGCTGTGTACACA	NA	False	NA	13	True	ATTAAA	-17	NA	151840288	151850906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_110490_25	chr2	+	2397	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	202	-2153	194	-12	multi-exon	FALSE	canonical	3	20	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGCCTTAGCCCAACA	NA	False	NA	19	True	NA	NA	NA	151947637	151953284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151947659_151950908
Isoform_110492_16	chr2	+	2525	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	68	-2147	60	-18	multi-exon	FALSE	canonical	3	20	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGCAATAGCCTTAGC	NA	False	NA	13	True	NA	NA	NA	151947503	151953278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151947659_151950908
Isoform_110493_478	chr2	+	2590	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	206	16	206	-16	multi-exon	FALSE	canonical	3	134	junction_1	0	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCAATAGCCTTAGCCC	NA	False	NA	15	True	NA	NA	NA	151947649	151953280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151947868_151950908
Isoform_110499_168	chr2	+	978	2	FSM	ENSMUSG00000068079.6	ENSMUST00000089112.6	980	2	-4	6	-4	-6	multi-exon	FALSE	canonical	3	131	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGGTGTGTATCCTG	7085	False	NA	NA	False	AATAAA	-11	NA	151985476	151991011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_151986059_151990615
Isoform_1105_1530	SIRV6	+	1434	9	FSM	SIRV6A	SIRV601	1435	9	2	-1	2	1	multi-exon	TRUE	canonical	3	2056	junction_3	7596.8547757855	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	1002	11827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
Isoform_11050_26	chr10	+	181	1	Intergenic	novelGene_805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGTCCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	40008674	40008855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_40008700_40008900
Isoform_110503_7	chr2	+	1359	9	FSM	ENSMUSG00000074698.11	ENSMUST00000136063.2	1559	9	-3	203	-3	-203	multi-exon	FALSE	canonical	2	55	junction_1	38.0195262332397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAATTAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	152068792	152115057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547
Isoform_110504_165	chr2	+	4167	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	37	2	0	-2	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCATGCAGCCTGAGC	NA	False	NA	17	True	AATAAA	-18	NA	152068795	152123770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
Isoform_110505_48	chr2	+	2685	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	8	1513	8	-1513	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTAGATTTAAGTTCCCT	NA	False	NA	-1	True	AATAAA	-20	NA	152068766	152122259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
Isoform_110508_6	chr2	+	4240	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	36	-70	-1	70	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGATTTGAACTTAATACG	NA	False	NA	4	True	AATAAA	-18	NA	152068794	152123842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
Isoform_11051_6	chr10	-	178	1	Intergenic	novelGene_806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAGCTGGGGA	3899	False	NA	NA	False	NA	NA	NA	40021494	40021316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_40021300_40021500
Isoform_110513_486	chr2	+	3338	8	FSM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	45	3	1	-3	multi-exon	FALSE	canonical	3	150	junction_1	23.7366503835013	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTGTCTTTGTATCAT	NA	False	NA	25	True	AATAAA	-20	NA	152135792	152155913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
Isoform_110515_7	chr2	+	1448	8	FSM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	20	1918	-3	1260	multi-exon	FALSE	canonical	3	150	junction_1	23.7366503835013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCAGCTTGTTTTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	152135767	152153998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
Isoform_110518_10	chr2	+	3489	7	FSM	ENSMUSG00000027465.14	ENSMUST00000140482.2	3496	7	4	3	4	-3	multi-exon	FALSE	canonical	3	150	junction_1	23.7323033484368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTGTCTTTGTATCAT	NA	False	NA	25	True	AATAAA	-20	NA	152135795	152155913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150352_152152305_152152448_152153236_152153425_152153629
Isoform_11052_7	chr10	-	217	1	Intergenic	novelGene_807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAATGAGTACTTATAGG	NA	False	NA	NA	False	NA	NA	NA	40055452	40055235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_40055200_40055500
Isoform_110523_6	chr2	+	2790	3	FSM	ENSMUSG00000019188.17	ENSMUST00000148156.2	2769	3	-18	-3	7	3	multi-exon	FALSE	canonical	3	150	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGTGTGTTTTCTCAA	NA	False	NA	NA	False	ATTAAA	-15	NA	152511387	152525364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152511685_152519461_152519561_152522970
Isoform_110525_20	chr2	+	1757	13	FSM	ENSMUSG00000019188.17	ENSMUST00000089059.9	1743	13	2	-16	2	16	multi-exon	FALSE	canonical	3	19	junction_11	48.170054667466	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTAGTGTTTCGTG	NA	False	NA	37	True	NA	NA	NA	152511409	152546972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546115_152546541
Isoform_110527_121	chr2	+	1554	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	29	3621	2	13	multi-exon	FALSE	canonical	3	117	junction_7	14.82905345753	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGCCTAGTGTTTC	NA	False	NA	34	True	NA	NA	NA	152511409	152546969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
Isoform_110530_3	chr2	+	632	2	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	30606	3619	8228	15	3prime_fragment	FALSE	canonical	3	175	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTAGTGTTTCGT	NA	False	NA	36	True	NA	NA	NA	152541986	152546971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_152542189_152546541
Isoform_110531_108	chr2	+	929	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	4	1	4	-1	multi-exon	FALSE	canonical	3	30	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGCTGTGACTTCTTGG	4426	False	NA	12	True	ATTAAA	-16	NA	152578174	152579329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152578666_152578891
Isoform_110532_4	chr2	+	720	5	FSM	ENSMUSG00000009876.14	ENSMUST00000010020.12	727	5	-1	8	-1	-5	multi-exon	FALSE	canonical	2	9	junction_4	3.69966214673719	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTCCCCTTTGGACTA	NA	False	NA	NA	False	AATAAA	-23	NA	152596091	152606949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152596145_152597074_152597160_152598929_152599095_152602557_152602690_152606664
Isoform_110538_153	chr2	+	2857	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	-10	636	4	-636	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2698	False	NA	17	True	AATAAA	-16	NA	152689887	152735938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110539_656	chr2	+	2780	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	67	636	-37	-636	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2775	False	NA	17	True	AATAAA	-16	NA	152689964	152735938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_11054_19	chr10	-	177	1	Intergenic	novelGene_1066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	6556	False	NA	NA	False	NA	NA	NA	81008363	81008186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_81008200_81008400
Isoform_110540_142	chr2	+	4081	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	67	-665	-37	-2	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	2775	False	NA	11	True	NA	NA	NA	152689964	152737239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110541_28	chr2	+	4164	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	-10	-671	4	4	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	2698	False	NA	17	True	NA	NA	NA	152689887	152737245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110546_114	chr2	+	2812	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	47	1302	16	-635	multi-exon	FALSE	canonical	3	176	junction_2	164.31464036434	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2741	False	NA	18	True	AATAAA	-17	NA	152689930	152735939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110547_27	chr2	+	4119	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	46	-4	15	4	multi-exon	FALSE	canonical	3	176	junction_2	164.31464036434	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	2740	False	NA	17	True	NA	NA	NA	152689929	152737245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110548_30	chr2	+	4084	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	81	-4	-37	4	multi-exon	FALSE	canonical	3	176	junction_2	164.31464036434	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	2775	False	NA	17	True	NA	NA	NA	152689964	152737245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_11055_5	chr10	-	176	1	Intergenic	novelGene_808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATTAAAAGAAA	5922	False	NA	NA	False	NA	NA	NA	40129106	40128930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_40128900_40129100
Isoform_110552_143	chr2	+	2803	18	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	40	-636	combination_of_known_junctions	FALSE	canonical	3	164	junction_2	166.868304785146	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2765	False	NA	17	True	AATAAA	-16	NA	152689954	152735938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110553_30	chr2	+	4134	18	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	16	4	combination_of_known_junctions	FALSE	canonical	3	164	junction_2	166.868304785146	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	2741	False	NA	17	True	NA	NA	NA	152689930	152737245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110554_23	chr2	+	2822	18	NIC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	-38	-605	combination_of_known_splicesites	FALSE	canonical	3	36	junction_2	194.571999464924	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCCAGTCTATTGGATT	2774	False	NA	48	True	NA	NA	NA	152689963	152735969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_152690030_152696840_152696936_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110559_225	chr2	+	2968	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	50	636	-37	-636	multi-exon	FALSE	canonical	3	159	junction_1	172.681016802699	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2775	False	NA	17	True	AATAAA	-16	NA	152689964	152735938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110561_37	chr2	+	4275	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	50	-671	-37	4	multi-exon	FALSE	canonical	3	159	junction_1	172.681016802699	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	2775	False	NA	17	True	NA	NA	NA	152689964	152737245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110563_58	chr2	+	2974	18	NIC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	40	-637	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	218.393996520653	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTGGTTTCAGTCACA	2765	False	NA	16	True	AATAAA	-15	NA	152689954	152735937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_152690218_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_110566_54	chr2	+	2981	18	FSM	ENSMUSG00000027469.17	ENSMUST00000164120.8	4365	18	81	1303	-37	-636	multi-exon	FALSE	canonical	3	159	junction_1	220.211647171926	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2775	False	NA	17	True	AATAAA	-16	NA	152689964	152735938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152690218_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_11057_4	chr10	+	304	1	Intergenic	novelGene_809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAATAAAACAATAA	NA	False	NA	NA	False	NA	NA	NA	40148518	40148822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_40148500_40148800
Isoform_110586_180	chr2	+	2070	13	FSM	ENSMUSG00000003283.16	ENSMUST00000189688.2	2090	13	13	7	13	-7	multi-exon	FALSE	canonical	3	76	junction_9	8.17346655682615	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCCAAGGGTCAGCTTC	NA	False	NA	10	True	AATAAA	-20	NA	152950400	152993352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
Isoform_110587_14	chr2	+	1996	13	FSM	ENSMUSG00000003283.16	ENSMUST00000109799.8	2092	13	114	-18	114	18	multi-exon	FALSE	canonical	3	76	junction_9	8.17346655682615	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAATGTGTTGGCCTTTCT	NA	False	NA	37	True	NA	NA	NA	152950501	152993379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
Isoform_110588_41	chr2	+	3657	18	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	123.527310906505	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAGGGTGCGGATTGAA	NA	False	NA	40	True	AATAAA	-29	NA	153003463	153052385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_153003492_153020805_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
Isoform_11059_3	chr10	+	180	1	Intergenic	novelGene_810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40166840	40167020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_40166800_40167000
Isoform_110598_976	chr2	+	3652	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	241	3	3	-3	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	NA	False	NA	38	True	AATAAA	-27	NA	153003463	153052383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
Isoform_110600_59	chr2	+	3897	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	-1	0	-1	0	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	False	NA	41	True	AATAAA	-30	NA	153003221	153052386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
Isoform_11061_4	chr10	+	178	1	Intergenic	novelGene_811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTC	NA	False	NA	NA	False	NA	NA	NA	40219784	40219962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_40219800_40220000
Isoform_110614_31	chr2	+	3446	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-18	2172	-18	12	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTGTTTCATAGTTTGT	NA	False	NA	NA	False	AATAGA	-28	NA	153083434	153109995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
Isoform_11062_6	chr10	+	2440	1	Genic_Genomic	ENSMUSG00000038481.14	novel	NA	NA	NA	NA	-18	-129139	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAACAAAACAAAACAAA	NA	False	NA	NA	False	CATAAA	-33	NA	40225285	40227725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_40225300_40227700
Isoform_110621_19	chr2	+	5642	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-42	0	-42	0	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGCCTTCATA	NA	False	NA	NA	False	NA	NA	NA	153083410	153112167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
Isoform_110622_6	chr2	+	5711	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-111	0	-111	0	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGCCTTCATA	NA	False	NA	NA	False	NA	NA	NA	153083341	153112167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
Isoform_110627_21	chr2	+	5578	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	28	-6	-8	6	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCCTTCATAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	153083480	153112173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
Isoform_110632_87	chr2	+	5609	9	FSM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	23	3	23	-3	multi-exon	FALSE	canonical	3	30	junction_1	5.17052946998661	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGGTGTCCTTGTCAGT	7836	False	NA	7	True	AATAAA	-26	NA	153133355	153175307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
Isoform_110635_87	chr2	+	5060	12	FSM	ENSMUSG00000042548.15	ENSMUST00000227428.2	6981	12	14	1907	-2	-1907	multi-exon	FALSE	canonical	0	0	junction_2	51.8797082897678	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGTGTGTGTATTTTA	NA	False	NA	22	True	AATAAA	-24	NA	153187762	153244020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153188311_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
Isoform_110636_64	chr2	+	6966	12	FSM	ENSMUSG00000042548.15	ENSMUST00000227428.2	6981	12	14	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_2	51.8797082897678	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTCCTTGTCATCTG	NA	False	NA	6	True	AATAAA	-15	NA	153187762	153245926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153188311_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
Isoform_11064_6	chr10	+	176	1	Intergenic	novelGene_812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGTACCTT	NA	False	NA	NA	False	NA	NA	NA	40234817	40234993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_40234800_40235000
Isoform_110643_4	chr2	+	6039	12	FSM	ENSMUSG00000042548.15	ENSMUST00000227428.2	6981	12	-8	950	-8	-950	multi-exon	FALSE	canonical	0	0	junction_2	51.8797082897678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACGTCTTCAGCACC	NA	False	NA	NA	False	NA	NA	NA	153187740	153244977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153188311_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
Isoform_11065_18	chr10	-	174	1	Intergenic	novelGene_712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	4780271	4780097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_4780100_4780300
Isoform_110655_16	chr2	+	4132	22	NIC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	25.7619487720775	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCTGTGTGTTTTTTAT	NA	False	NA	25	True	ATTAAA	-17	NA	153491373	153529649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
Isoform_110657_9	chr2	+	4322	24	FSM	ENSMUSG00000027478.16	ENSMUST00000109774.9	4320	24	-3	1	0	-1	multi-exon	FALSE	canonical	3	28	junction_1	28.4266708280574	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCTGTGTGTTTTTTAT	NA	False	NA	25	True	ATTAAA	-17	NA	153491369	153529649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
Isoform_110659_15	chr2	+	4134	22	FSM	ENSMUSG00000027478.16	ENSMUST00000088976.12	4130	22	-4	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	27.8880983888474	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491369	153529650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
Isoform_11066_4	chr10	-	168	1	Intergenic	novelGene_813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATTGTTAGCTGC	8433	False	NA	NA	False	NA	NA	NA	40249689	40249521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_40249500_40249700
Isoform_110661_30	chr2	+	4208	23	FSM	ENSMUSG00000027478.16	ENSMUST00000109771.2	3630	23	-167	-411	0	1	multi-exon	FALSE	canonical	3	48	junction_1	22.8903242036621	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153491369	153529647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
Isoform_110664_3	chr2	+	3945	21	NIC	ENSMUSG00000027478.16	novel	3630	23	NA	NA	72	-1	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	20.6421898063166	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCTGTGTGTTTTTTAT	NA	False	NA	25	True	ATTAAA	-17	NA	153491445	153529649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
Isoform_110666_18	chr2	+	4206	23	FSM	ENSMUSG00000027478.16	ENSMUST00000072997.10	4208	23	0	2	0	2	multi-exon	FALSE	canonical	3	33	junction_15	25.158013034314	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTGTGTGTTTTTTA	NA	False	NA	24	True	ATTAAA	-16	NA	153491369	153529648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
Isoform_110671_3	chr2	+	3761	21	FSM	ENSMUSG00000027478.16	ENSMUST00000109772.8	4015	21	250	4	87	0	multi-exon	FALSE	canonical	3	33	junction_15	23.6207535866238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153491623	153529646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
Isoform_110672_6	chr2	+	3957	20	NIC	ENSMUSG00000027478.16	novel	3956	20	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	28.3100170206927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTGTGTGTTTTTTA	NA	False	NA	24	True	ATTAAA	-16	NA	153491372	153529648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
Isoform_110673_3	chr2	+	4084	22	NIC	ENSMUSG00000027478.16	novel	4208	23	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	28.8066507815765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCTGTGTGTTTTTTAT	NA	False	NA	25	True	ATTAAA	-17	NA	153491369	153529649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
Isoform_110680_1146	chr2	+	2569	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	19	4748	19	-4748	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583212	153610482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
Isoform_110690_75	chr2	+	7320	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	15	1	15	-1	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAATGGCTGTGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	153583208	153615229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
Isoform_11070_3	chr10	-	171	1	Intergenic	novelGene_814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGTCAACCTC	NA	False	NA	NA	False	NA	NA	NA	40624434	40624263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_40624300_40624400
Isoform_110704_6	chr2	+	883	6	ISM	ENSMUSG00000074665.12	ENSMUST00000099181.2	1479	13	10149	1	10149	-1	3prime_fragment	FALSE	canonical	2	5	junction_4	2.13541565040626	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGGGTGTCTCCATGA	NA	False	NA	NA	False	NA	NA	NA	153795991	153805771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_153796354_153799049_153799118_153799638_153799682_153801569_153801634_153803435_153803513_153805502
Isoform_110705_21	chr2	+	1613	15	FSM	ENSMUSG00000038572.8	ENSMUST00000045959.8	1637	15	21	3	21	-3	multi-exon	FALSE	canonical	3	25	junction_6	7.50951777032701	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTGTGTCTGAGTTTG	NA	False	NA	2	True	AATAAA	-12	NA	154065682	154082819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154070773_154070859_154070950_154071015_154071386_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677_154078742_154080747_154080828_154082671
Isoform_110706_5	chr2	+	1672	15	FSM	ENSMUSG00000038572.8	ENSMUST00000045959.8	1637	15	-38	3	-38	-3	multi-exon	FALSE	canonical	3	25	junction_6	7.50951777032701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTGTGTCTGAGTTTG	NA	False	NA	2	True	AATAAA	-12	NA	154065623	154082819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154070773_154070859_154070950_154071015_154071386_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677_154078742_154080747_154080828_154082671
Isoform_110710_18	chr2	+	1831	10	ISM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-47	7756	-33	1	5prime_fragment	TRUE	canonical	3	422	junction_9	51.6952131413383	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGTCTACCACACACAC	5270	False	NA	13	True	AATAAA	-18	NA	154278367	154373520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141
Isoform_110712_186	chr2	+	2518	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-22	3573	-8	819	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGATCATTTTGGACAA	5295	False	NA	NA	False	ATTAAA	-17	NA	154278392	154377703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_110713_129	chr2	+	6105	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-37	1	-23	-1	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGACCAGACCTGGGGA	5280	False	NA	36	True	AATAAA	-26	NA	154278377	154381275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_110718_461	chr2	+	6062	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	2	5	2	-5	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCTGGACCAGACCTG	5319	False	NA	32	True	AATAAA	-22	NA	154278416	154381271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_11072_7	chr10	-	176	1	Intergenic	novelGene_815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	40838785	40838609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_40838600_40838800
Isoform_110731_117	chr2	+	6081	11	FSM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	-8	7	-8	-7	multi-exon	FALSE	canonical	3	122	junction_9	126.860553364708	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAAGCTGGACCAGACC	5295	False	NA	30	True	AATAAA	-20	NA	154278392	154381269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
Isoform_110737_18	chr2	+	2370	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-8	815	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	140.841474671541	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCATGGATCATTTTGG	5295	False	NA	NA	False	ATTAAA	-13	NA	154278392	154377699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_110739_51	chr2	+	5920	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	140.841474671541	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGGACCAGACCTGGG	5319	False	NA	34	True	AATAAA	-24	NA	154278416	154381273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_110754_10	chr2	+	3271	15	FSM	ENSMUSG00000059842.13	ENSMUST00000081926.13	3299	15	24	4	24	-4	multi-exon	FALSE	canonical	2	3	junction_5	3.22062866217014	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGCCTGAGTCTCAGAG	5746	False	NA	21	True	AATAAA	-31	NA	154455240	154488737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154455323_154463672_154463784_154466774_154466972_154468697_154468848_154469807_154470054_154470719_154470916_154472328_154472420_154474198_154474390_154476006_154476198_154479933_154480143_154483235_154483333_154483901_154484035_154485408_154485521_154485706_154485778_154487543
Isoform_110756_17	chr2	+	1675	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	-61	2	-61	-2	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCTGTGTGTTCAGTCA	NA	False	NA	28	True	ATTAAA	-20	NA	154498876	154536703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
Isoform_110757_160	chr2	+	1581	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	33	2	33	-2	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCTGTGTGTTCAGTCA	NA	False	NA	28	True	ATTAAA	-20	NA	154498970	154536703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
Isoform_11076_4	chr10	+	177	1	Intergenic	novelGene_816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	41197165	41197342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_41197200_41197300
Isoform_110762_38	chr2	+	1499	9	NIC	ENSMUSG00000027593.16	novel	1747	9	NA	NA	-27	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	44.2965856472031	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154632988	154709162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_154633152_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_110765_35	chr2	+	1407	8	NIC	ENSMUSG00000027593.16	novel	1709	8	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	53.0813776484863	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154632997	154709162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_154633152_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_11077_4	chr10	+	172	1	Intergenic	novelGene_817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCTAGTGGGGTTGA	NA	False	NA	NA	False	NA	NA	NA	41232984	41233156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_41233000_41233200
Isoform_110771_298	chr2	+	1578	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	222	2	1	-2	multi-exon	FALSE	canonical	3	28	junction_4	48.6369772452561	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633274	154709162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_110772_33	chr2	+	1873	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	-73	2	-36	-2	multi-exon	FALSE	canonical	3	28	junction_4	48.6369772452561	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154632979	154709162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_110773_1147	chr2	+	1530	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	198	19	1	-2	multi-exon	FALSE	canonical	3	129	junction_2	14.5945195193264	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633274	154709162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_110774_86	chr2	+	1782	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	-54	19	-3	-2	multi-exon	FALSE	canonical	3	129	junction_2	14.5945195193264	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633022	154709162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_11078_3	chr10	+	294	1	Intergenic	novelGene_818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTTAAAAAACTAGTAA	NA	False	NA	NA	False	AATAAA	-5	NA	41232985	41233279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_41233000_41233300
Isoform_110781_83	chr2	+	1495	9	FSM	ENSMUSG00000027593.16	ENSMUST00000116389.9	1759	9	245	19	1	-2	multi-exon	FALSE	canonical	3	28	junction_3	53.4051437129421	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633274	154709162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_110783_447	chr2	+	1447	8	FSM	ENSMUSG00000027593.16	ENSMUST00000109701.10	1709	8	259	3	1	-2	multi-exon	FALSE	canonical	3	70	junction_1	30.0557305480255	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633274	154709162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_110796_5	chr2	+	3724	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	-45	1630	5	-1630	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCATTCTTGATTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	154975433	155067143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
Isoform_110797_108	chr2	+	5334	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	-23	-2	5	0	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975455	155068775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
Isoform_110800_120	chr2	+	5134	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	21	4	-1	-2	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCATTTGCCTTTTCGTC	NA	False	NA	53	True	AATAAA	-13	NA	154975449	155068771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
Isoform_110817_762	chr2	+	658	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	22	4	22	1	multi-exon	FALSE	canonical	3	1428	junction_1	142.385236438177	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTGTGTCTTTAC	NA	False	NA	15	True	AGTAAA	-17	NA	155078476	155092193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
Isoform_110819_10	chr2	+	731	4	FSM	ENSMUSG00000047459.15	ENSMUST00000135831.2	534	4	-4	-193	-4	1	multi-exon	FALSE	canonical	3	40	junction_1	796.677405785359	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTGTGTCTTTAC	NA	False	NA	15	True	AGTAAA	-17	NA	155078726	155092193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155078861_155084650_155084727_155089690_155089859_155091840
Isoform_11082_58	chr10	+	177	1	Intergenic	novelGene_819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	41339116	41339293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_41339100_41339300
Isoform_110821_531	chr2	+	961	4	FSM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	150	1	-96	-1	multi-exon	FALSE	canonical	3	435	junction_1	22.4251842554055	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCCAGCTGCTTG	NA	False	NA	10	True	AATAAA	-22	NA	155118366	155119992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155118567_155118877_155118934_155119017_155119125_155119394
Isoform_110822_38	chr2	+	1070	4	FSM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	48	-6	48	6	multi-exon	FALSE	canonical	3	435	junction_1	22.4251842554055	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCTGCTTGTTTGGGA	NA	False	NA	17	True	AATAAA	-29	NA	155118264	155119999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155118567_155118877_155118934_155119017_155119125_155119394
Isoform_110824_15	chr2	+	814	3	FSM	ENSMUSG00000027602.10	ENSMUST00000154596.2	826	3	16	-4	16	-1	multi-exon	FALSE	canonical	3	438	junction_2	23	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCCAGCTGCTTG	NA	False	NA	10	True	AATAAA	-22	NA	155118824	155119992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155118934_155119017_155119125_155119394
Isoform_110825_199	chr2	+	3946	4	FSM	ENSMUSG00000038375.16	ENSMUST00000043237.14	3979	4	30	3	4	-3	multi-exon	FALSE	canonical	3	61	junction_1	13.490737563232	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTTCTGCCTCAGCT	4071	False	NA	6	True	AATAAA	-18	NA	155223763	155231767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155223938_155227209_155227385_155227800_155228090_155228459
Isoform_110826_33	chr2	+	3848	4	FSM	ENSMUSG00000038375.16	ENSMUST00000174685.8	740	4	-18	-3090	8	-3	multi-exon	FALSE	canonical	3	14	junction_2	32.8261413442938	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTTCTGCCTCAGCT	4049	False	NA	6	True	AATAAA	-18	NA	155223741	155231767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155223938_155227209_155227385_155227920_155228090_155228459
Isoform_110828_10	chr2	+	4477	4	NIC	ENSMUSG00000038375.16	novel	991	3	NA	NA	21	-5	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	39.8106630048896	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATGCTTTCTGCCTCAG	4450	False	NA	4	True	AATAAA	-16	NA	155224142	155231765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_155224850_155227209_155227385_155227800_155228090_155228459
Isoform_11083_3	chr10	+	214	1	Intergenic	novelGene_820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAAAAGACTTTAT	NA	False	NA	NA	False	NA	NA	NA	41367926	41368140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_41367900_41368100
Isoform_110830_6	chr2	+	2872	19	FSM	ENSMUSG00000027605.19	ENSMUST00000103142.12	2145	19	-64	-663	10	-3	multi-exon	FALSE	canonical	1	2	junction_7	21.9854750030813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGCTTTTTTTAGGTAT	2102	False	NA	16	True	AATAAA	-20	NA	155359962	155404663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155393109_155393149_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
Isoform_110831_285	chr2	+	2820	18	FSM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	110	1	1	-1	multi-exon	FALSE	canonical	2	49	junction_8	8.02030295659528	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTTTTTTAGGTATCT	2117	False	NA	18	True	AATAAA	-22	NA	155359977	155404665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
Isoform_110834_3	chr2	+	2380	4	NNC	ENSMUSG00000085317.2	novel	727	3	NA	NA	-7	1671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.77123616632825	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCCCAGGACTCTCTAT	NA	False	NA	NA	False	NA	NA	NA	155433043	155436442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_155433232_155433942_155433958_155433982_155434089_155434371
Isoform_110836_3	chr2	+	5620	35	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	6006	104	6006	0	3prime_fragment	FALSE	canonical	3	22	junction_10	16.5320282626636	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155459137	155476123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
Isoform_110837_6	chr2	+	5285	32	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	7371	103	7371	1	3prime_fragment	FALSE	canonical	3	22	junction_7	15.8722134313131	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCACTGTCCTTATTTC	NA	False	NA	12	True	AATAAA	-17	NA	155460502	155476124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
Isoform_110838_36	chr2	+	2541	14	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	18120	103	272	1	3prime_fragment	FALSE	canonical	3	44	junction_5	10.8850910469592	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCACTGTCCTTATTTC	NA	False	NA	12	True	AATAAA	-17	NA	155471251	155476124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
Isoform_11084_39	chr10	+	180	1	Intergenic	novelGene_821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	41368251	41368431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_41368300_41368400
Isoform_110840_7	chr2	+	2600	14	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	18168	-4	320	4	3prime_fragment	FALSE	canonical	3	44	junction_5	10.8850910469592	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCGGTTTATTTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	155471299	155476231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
Isoform_110841_3	chr2	+	2520	6	NNC	ENSMUSG00000038241.17	novel	1254	8	NA	NA	-5	-984	intron_retention	FALSE	non_canonical	0	0	junction_3	21.4699790405114	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	155798472	155808730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805633_155805716_155806029_155806196_155806908
Isoform_110845_3	chr2	+	3243	18	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-9	2491	intron_retention	FALSE	non_canonical	0	0	junction_3	15.9375945617657	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAATTTTTACTGATAT	NA	False	NA	NA	False	NA	NA	NA	155798468	155818856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805633_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308
Isoform_110849_4	chr2	+	2340	6	ISM	ENSMUSG00000038241.17	ENSMUST00000148191.2	6361	15	15205	0	5679	0	3prime_fragment	FALSE	canonical	3	82	junction_1	17.1813852759316	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	7369	False	NA	12	True	AATAAA	-19	NA	155833513	155840820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
Isoform_110850_3	chr2	+	3334	6	ISM	ENSMUSG00000038241.17	ENSMUST00000148191.2	6361	15	14218	-7	4692	7	3prime_fragment	FALSE	canonical	3	82	junction_1	17.1813852759316	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTCTCTGCTTATGT	6382	False	NA	19	True	AATAAA	-26	NA	155832526	155840827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
Isoform_110851_4	chr2	+	3150	6	ISM	ENSMUSG00000038241.17	ENSMUST00000148191.2	6361	15	14394	1	4868	-1	3prime_fragment	FALSE	canonical	3	82	junction_1	17.1813852759316	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	6558	False	NA	11	True	AATAAA	-18	NA	155832702	155840819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
Isoform_110855_3	chr2	+	3599	6	ISM	ENSMUSG00000038241.17	ENSMUST00000148191.2	6361	15	13946	0	4420	0	3prime_fragment	FALSE	canonical	3	82	junction_1	17.1813852759316	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	6110	False	NA	12	True	AATAAA	-19	NA	155832254	155840820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
Isoform_110856_755	chr2	+	1311	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	63	3	2	-1	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGGTCTCAGTGTG	NA	False	NA	13	True	AATAAA	-16	NA	155850027	155860196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
Isoform_110857_204	chr2	+	1337	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	37	3	-24	-1	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGGTCTCAGTGTG	NA	False	NA	13	True	AATAAA	-16	NA	155850001	155860196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
Isoform_110862_12	chr2	+	1154	11	NIC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	252.247675906043	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTCTCAGTGTGAT	NA	False	NA	15	True	AATAAA	-18	NA	155850027	155860198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_155850149_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
Isoform_110865_21	chr2	+	1163	11	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	477	1	-97	1	3prime_fragment	FALSE	canonical	3	758	junction_2	58.9983898085363	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTCTCAGTGTGAT	NA	False	NA	15	True	AATAAA	-18	NA	155850441	155860198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
Isoform_110868_3	chr2	+	1510	12	NNC	ENSMUSG00000038180.12	novel	1473	12	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7.19159288784222	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGAGGTTTGTGCTAA	NA	False	NA	8	True	ATTAAA	-19	NA	155907123	155911417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_155907592_155908053_155908159_155908486_155908555_155908724_155908787_155909008_155909053_155909231_155909258_155909374_155909484_155909666_155909743_155909856_155909973_155910290_155910459_155911056_155911147_155911239
Isoform_110869_9	chr2	+	383	3	FSM	ENSMUSG00000067847.14	ENSMUST00000119950.2	379	3	-5	1	2	-1	multi-exon	FALSE	canonical	3	37	junction_1	474	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTATTTTTACCT	6547	False	NA	13	True	AATAAA	-18	NA	155986154	155987713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155986201_155986364_155986510_155987521
Isoform_110870_338	chr2	+	369	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	197	3	-1	0	multi-exon	FALSE	canonical	3	748	junction_1	118.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	6548	False	NA	14	True	AATAAA	-19	NA	155986155	155987714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155986201_155986378_155986510_155987521
Isoform_110871_5	chr2	+	561	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	4	4	4	-1	multi-exon	FALSE	canonical	3	748	junction_1	118.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTATTTTTACCT	6355	False	NA	13	True	AATAAA	-18	NA	155985962	155987713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155986201_155986378_155986510_155987521
Isoform_110873_8	chr2	+	529	2	FSM	ENSMUSG00000067847.14	ENSMUST00000109597.10	550	2	21	0	14	0	multi-exon	FALSE	canonical	3	985	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	6566	False	NA	14	True	AATAAA	-19	NA	155986173	155987714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_155986510_155987521
Isoform_110880_326	chr2	+	5637	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	100	0	8	0	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038661	156151872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
Isoform_110883_15	chr2	+	5719	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	19	-1	19	1	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	10	True	AATAAA	-19	NA	156038580	156151873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
Isoform_110889_15	chr2	+	5552	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	82.3578320501457	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038661	156151872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
Isoform_110916_7	chr2	+	1959	13	FSM	ENSMUSG00000038085.14	ENSMUST00000037096.9	2277	13	318	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	2.37463447479583	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTCTCTGTTCTCTGT	NA	False	NA	2	True	AATAAA	-12	NA	156154536	156217555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156154720_156161929_156161984_156170237_156170376_156175498_156175553_156177169_156177334_156180494_156180652_156181050_156181203_156183521_156183661_156195114_156195230_156207038_156207217_156209476_156209598_156215565_156215730_156217215
Isoform_110917_8	chr2	+	3562	22	NIC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	9	860	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	40.1842694372323	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTACCTGACTGTGA	7793	False	NA	25	True	AATAAA	-35	NA	156262980	156382766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
Isoform_110918_7	chr2	+	5918	23	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	47.0768011510082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGACTCCCTCAGCCT	7774	False	NA	12	True	AATAAA	-27	NA	156262961	156385133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_110919_37	chr2	+	3934	23	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-14	863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	42.3145443217462	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	7766	False	NA	28	True	AATAAA	-38	NA	156262953	156382769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_110921_8	chr2	+	6267	22	FSM	ENSMUSG00000027624.21	ENSMUST00000109577.9	6251	22	-20	4	8	-2	multi-exon	FALSE	canonical	3	36	junction_14	33.5816600417023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCATGGACTCCCTCAG	7824	False	NA	9	True	AATAAA	-24	NA	156263011	156385130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
Isoform_110922_86	chr2	+	3497	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	9	861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	35.2440149467844	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTACCTGACTGTGAT	7793	False	NA	26	True	AATAAA	-36	NA	156262980	156382767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_110923_12	chr2	+	3397	21	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	77	859	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	20.7663188841932	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAATTACCTGACTGTG	7921	False	NA	24	True	AATAAA	-34	NA	156263108	156382765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
Isoform_110925_20	chr2	+	5863	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	35.2440149467844	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGACTCCCTCAGCCT	7793	False	NA	12	True	AATAAA	-27	NA	156262980	156385133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_110929_10	chr2	+	5922	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	35.2440149467844	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCATGGACTCCCTCAG	7731	False	NA	9	True	AATAAA	-24	NA	156262918	156385130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_110930_6	chr2	+	3917	23	NNC	ENSMUSG00000027624.21	novel	8344	25	NA	NA	-7	850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	47.5874141288542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCCAAGTTATAATTAC	7773	False	NA	15	True	AATAAA	-25	NA	156262960	156382756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382341
Isoform_110931_14	chr2	+	3496	22	NNC	ENSMUSG00000027624.21	novel	5904	21	NA	NA	9	863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	42.2942934240049	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	7793	False	NA	28	True	AATAAA	-38	NA	156262980	156382769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_110933_7	chr2	+	3560	22	NIC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-7	862	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	45.3948662025897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTACCTGACTGTGATT	7773	False	NA	27	True	AATAAA	-37	NA	156262960	156382768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
Isoform_110934_4	chr2	+	3892	23	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-2	859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	46.9181853411071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAATTACCTGACTGTG	7778	False	NA	24	True	AATAAA	-34	NA	156262965	156382765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382316_156382347
Isoform_110935_21	chr2	+	3473	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-3	845	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	41.4527570344801	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACATTTCCAAGTTATA	7777	False	NA	10	True	AATAAA	-20	NA	156262964	156382751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_110936_6	chr2	+	3481	21	NIC	ENSMUSG00000027624.21	novel	5904	21	NA	NA	-3	859	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	31.2878171178496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAATTACCTGACTGTG	7813	False	NA	24	True	AATAAA	-34	NA	156263000	156382765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
Isoform_110937_4	chr2	+	5887	21	NIC	ENSMUSG00000027624.21	novel	8344	25	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	31.2878171178496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	7774	False	NA	11	True	AATAAA	-26	NA	156262961	156385132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
Isoform_110941_15	chr2	+	2784	5	NIC	ENSMUSG00000027628.11	novel	2766	5	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	64.3481740222673	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCCTGTGTGAGTCTCT	NA	False	NA	8	True	ATTAAA	-19	NA	156389519	156410077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_156389804_156391771_156391948_156392568_156393370_156397746_156397977_156408784
Isoform_110943_42	chr2	+	2751	5	FSM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	15	0	3	0	multi-exon	FALSE	canonical	0	0	junction_2	64.1190299365173	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCCTGTGTGAGTCTC	NA	False	NA	7	True	ATTAAA	-18	NA	156389518	156410076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156389804_156391804_156391948_156392568_156393370_156397746_156397977_156408784
Isoform_110944_544	chr2	+	2611	4	FSM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	3	813	3	3	multi-exon	FALSE	canonical	3	133	junction_3	2.16024689946929	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGTGTGAGTCTCTTA	NA	False	NA	10	True	ATTAAA	-21	NA	156389518	156410079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156389804_156392568_156393370_156397746_156397977_156408784
Isoform_110950_37	chr2	+	3503	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	-56	1404	-56	4	multi-exon	FALSE	canonical	2	10	junction_1	158.364996833967	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTTTCTCACCCTTCA	NA	False	NA	15	True	ATTAAA	-18	NA	156455568	156604879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_110951_13	chr2	+	4907	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	-56	0	-56	0	multi-exon	FALSE	canonical	2	10	junction_1	158.364996833967	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCTCATGGTGTTATT	NA	False	NA	7	True	NA	NA	NA	156455568	156606283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_110955_223	chr2	+	1428	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	1	166	0	3	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGTTTCTCACCCTTC	NA	False	NA	14	True	ATTAAA	-17	NA	156562965	156604878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_110959_53	chr2	+	1513	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	-83	165	-69	4	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTTTCTCACCCTTCA	NA	False	NA	15	True	ATTAAA	-18	NA	156562881	156604879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_110961_14	chr2	+	2930	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	-97	-1238	-83	1	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGCCTCATGGTGTTAT	NA	False	NA	6	True	NA	NA	NA	156562867	156606282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_110964_40	chr2	+	2412	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-414	1404	8	4	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTTTCTCACCCTTCA	NA	False	NA	15	True	ATTAAA	-18	NA	156562997	156604879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_110966_13	chr2	+	3815	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-414	1	8	1	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGCCTCATGGTGTTAT	NA	False	NA	6	True	NA	NA	NA	156562997	156606282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_110972_421	chr2	+	2850	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	50	0	-43	0	multi-exon	FALSE	canonical	3	217	junction_2	7.5	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156681976	156697490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156682159_156686075_156686302_156695048
Isoform_110974_30	chr2	+	2935	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	-38	3	-38	-3	multi-exon	FALSE	canonical	3	217	junction_2	7.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAATTTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	156681888	156697487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156682159_156686075_156686302_156695048
Isoform_110980_116	chr2	+	2742	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	-54	2	39	-2	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAATTTTTTGTTGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	156681965	156697488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
Isoform_110984_90	chr2	+	2791	3	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-56	-2	intron_retention	FALSE	canonical	3	38	junction_1	89.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAATTTTTTGTTGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	156682885	156697488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_156683011_156686075_156686302_156695048
Isoform_110987_20	chr2	+	2640	4	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-25	-5	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	80.6735534250365	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTGAATTTTTTGTTG	NA	False	NA	NA	False	AATAAA	-30	NA	156682916	156697485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_156683011_156686075_156686302_156695048_156695149_156695265
Isoform_110992_828	chr2	+	1051	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	-8	2	-8	-2	multi-exon	FALSE	canonical	3	1149	junction_1	99.8031395631754	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTTGGCATGCCTGG	4634	False	NA	12	True	AATAAA	-16	NA	156705039	156715481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
Isoform_110994_75	chr2	+	1154	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	-111	2	-111	-2	multi-exon	FALSE	canonical	3	1149	junction_1	99.8031395631754	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTTGGCATGCCTGG	4531	False	NA	12	True	AATAAA	-16	NA	156704936	156715481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
Isoform_110997_48	chr2	+	911	3	FSM	ENSMUSG00000027637.4	ENSMUST00000152551.2	765	3	17	-163	11	-2	multi-exon	FALSE	canonical	3	93	junction_1	636.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTTGGCATGCCTGG	4670	False	NA	12	True	AATAAA	-16	NA	156705075	156715481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_156705338_156714257_156714388_156714962
Isoform_111005_2563	chr2	+	2242	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	252	262	-115	1	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	2563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157121230	157167977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
Isoform_111007_1830	chr2	+	2483	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	11	262	11	1	multi-exon	TRUE	canonical	3	1870	junction_1	194.730412606121	1830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157120989	157167977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
Isoform_111009_108	chr2	+	2506	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	252	-2	-115	2	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTTCTGTGATAAAAT	NA	False	NA	22	True	AATAAA	-19	NA	157121230	157168241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
Isoform_11102_8	chr10	+	173	1	Intergenic	novelGene_823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATGCCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	41555734	41555907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_41555700_41555900
Isoform_111021_128	chr2	+	2240	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	585.730790204638	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157121230	157167977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_157121254_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
Isoform_11104_11	chr10	+	181	1	Intergenic	novelGene_824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATTTCCTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	41573792	41573973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_41573800_41574000
Isoform_111046_546	chr2	+	1092	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	15	0	15	0	multi-exon	FALSE	canonical	3	219	junction_1	136	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTGTTGCTACTG	5232	False	NA	30	True	AATAAA	-17	NA	157209528	157238683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157209561_157220968_157221175_157237829
Isoform_111048_13	chr2	+	3993	15	NIC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	47.6961043204467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266196	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_157266335_157266747_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_111050_9	chr2	+	3925	15	FSM	ENSMUSG00000027646.16	ENSMUST00000092576.11	3887	15	-38	0	-25	0	multi-exon	FALSE	canonical	3	8	junction_5	51.505696138329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266174	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_111052_167	chr2	+	3884	14	FSM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	-2	24	-2	0	multi-exon	FALSE	canonical	3	53	junction_1	27.1024791983727	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266197	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_111056_37	chr2	+	4012	14	FSM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	-130	24	34	0	multi-exon	FALSE	canonical	3	53	junction_1	27.1024791983727	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266069	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_111062_14	chr2	+	4213	14	NIC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	78	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	36.0835650766253	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266389	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_11107_5	chr10	-	293	1	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-14	-7908	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGGAAAAAAAAAAAAAAGAA	353	False	NA	NA	False	NA	NA	NA	41685640	41685347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41685300_41685600
Isoform_111075_3	chr2	+	1209	3	FSM	ENSMUSG00000067786.17	ENSMUST00000109526.2	1213	3	0	4	0	1	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTCTTTTGTGGCTTC	9293	False	NA	8	True	NA	NA	NA	157402029	157404438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157402181_157403132_157403214_157403461
Isoform_111076_10	chr2	+	3249	4	ISM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	38	99791	38	-14909	5prime_fragment	FALSE	canonical	3	527	junction_3	51.0751080925598	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAATTTTTAATCTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	157579358	157633743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911
Isoform_111077_799	chr2	+	1863	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	62	517	62	-517	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGACATTGTATGTGTAA	NA	False	NA	20	True	ATTAAA	-20	NA	157579382	157733017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
Isoform_111078_44	chr2	+	2394	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	61	-13	61	13	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGATGTGCTTCCCA	NA	False	NA	NA	False	GGGGCT	-38	NA	157579381	157733547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
Isoform_111079_15	chr2	+	1959	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	-40	523	-40	-523	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGCTGACATTGTAT	NA	False	NA	14	True	ATTAAA	-14	NA	157579280	157733011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
Isoform_11108_1239	chr10	-	2874	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	-125	-1555	-125	1555	mono-exon	FALSE	NA	NA	NA	NA	NA	1239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	2337	False	NA	NA	False	ATTAAA	-15	NA	41931427	41928553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_41928600_41931400
Isoform_111083_13	chr2	+	1368	4	FSM	ENSMUSG00000037843.7	ENSMUST00000109523.2	1363	4	-7	2	-7	-2	multi-exon	FALSE	canonical	3	14	junction_1	2.49443825784929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGGGCAGTGCCTTGCT	NA	False	NA	3	True	AATAAA	-13	NA	157756565	157786637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157756852_157777244_157777415_157779110_157779162_157785776
Isoform_111084_3	chr2	+	1337	3	NIC	ENSMUSG00000037843.7	novel	1363	4	NA	NA	-28	-3	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCCGGGCAGTGCCTTGC	NA	False	NA	2	True	AATAAA	-12	NA	157756544	157786636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_157756852_157777244_157777415_157785776
Isoform_111090_236	chr2	+	3617	7	FSM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	-221	887	3	-887	multi-exon	FALSE	canonical	3	131	junction_3	20.3749573960018	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870419	157919240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
Isoform_111097_119	chr2	+	3606	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	9	889	-2	-889	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGTGATGTTTCTTCT	NA	False	NA	8	True	AATAAA	-19	NA	157870425	157919238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
Isoform_1111_1689	SIRV6	+	573	8	FSM	SIRV6A	SIRV602	574	8	1	0	1	0	multi-exon	FALSE	canonical	3	8561	junction_3	5767.41567350754	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1125	11279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
Isoform_111102_10	chr2	+	3499	6	NIC	ENSMUSG00000027651.17	novel	4283	7	NA	NA	-11	-889	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.3452370108182	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGTGATGTTTCTTCT	NA	False	NA	8	True	AATAAA	-19	NA	157870405	157919238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_157870966_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
Isoform_111104_10	chr2	+	1897	15	FSM	ENSMUSG00000016024.10	ENSMUST00000016168.9	2525	15	92	536	-27	-536	multi-exon	FALSE	canonical	1	2	junction_3	1.75691055374984	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAGCTGAACCTCTT	NA	False	NA	NA	False	NA	NA	NA	158148504	158174236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158148714_158150600_158150716_158151520_158151650_158155392_158155549_158156072_158156137_158159456_158159521_158161591_158161684_158162183_158162361_158163974_158164035_158166428_158166597_158167626_158167695_158168147_158168191_158169436_158169501_158170265_158170343_158173825
Isoform_111107_5	chr2	+	5841	5	FSM	ENSMUSG00000044349.17	ENSMUST00000109488.8	5864	5	22	1	-1	-1	multi-exon	FALSE	canonical	3	5	junction_4	1.92028643696715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTCGGTCACATGT	NA	False	NA	20	True	NA	NA	NA	158217579	158228064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158217809_158218000_158218247_158218913_158218993_158222690_158222772_158222858
Isoform_111108_3	chr2	+	3146	2	ISM	ENSMUSG00000027652.16	ENSMUST00000150789.8	2332	3	25	4296	19	2856	5prime_fragment	FALSE	canonical	3	112	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAACCAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	158251820	158265676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_158252024_158262733
Isoform_111109_3	chr2	+	3841	9	FSM	ENSMUSG00000027652.16	ENSMUST00000143394.8	3842	9	2	-1	-1	1	multi-exon	FALSE	canonical	3	103	junction_6	11.5866302262565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTATTGTAGTTTTTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	158251800	158281567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179
Isoform_111110_32	chr2	+	5989	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	29	2365	1	-758	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGGTTTGAGGTTTC	NA	False	NA	16	True	ATTAAA	-18	NA	158251796	158338808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
Isoform_111111_13	chr2	+	8350	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	29	4	1	-4	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTTGGTGTGTGCTTTT	NA	False	NA	25	True	ATTAAA	-22	NA	158251796	158341169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
Isoform_111116_19	chr2	+	5278	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	42	3046	13	-1439	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACAAGTTGTCCCTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	158251814	158338127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
Isoform_111117_10	chr2	+	5978	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	24	2364	1	-757	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGGTTTGAGGTTTCT	NA	False	NA	17	True	ATTAAA	-19	NA	158251796	158338809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
Isoform_111118_3	chr2	+	8337	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	24	5	1	-5	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTGGTGTGTGCTTT	NA	False	NA	24	True	ATTAAA	-21	NA	158251796	158341168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
Isoform_111120_341	chr2	+	2368	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	29	5	29	-5	multi-exon	FALSE	canonical	0	0	junction_4	35.8634563309227	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466836	158481126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
Isoform_111121_48	chr2	+	2613	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	29	-240	29	240	multi-exon	FALSE	canonical	0	0	junction_4	35.8634563309227	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTCGTCTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	158466836	158481371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
Isoform_111123_15	chr2	+	2347	9	NIC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	31	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	44.7960656754586	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466838	158481126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477946_158478068_158478587_158478721_158480552
Isoform_111125_28	chr2	+	2368	9	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	33	-5	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	10.0498756211209	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466840	158481126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473605_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
Isoform_111126_9	chr2	+	2620	9	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	21	235	at_least_one_novel_splicesite	TRUE	canonical	3	87	junction_1	10.0498756211209	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTTGTGTTCGTCTGT	NA	False	NA	NA	False	NA	NA	NA	158466828	158481366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473605_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
Isoform_111129_396	chr2	+	2265	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	1	0	1	0	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	407	False	NA	8	True	AATAAA	-16	NA	158610013	158628557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
Isoform_111131_10	chr2	+	2342	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	-80	4	-80	-4	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTTGTGTGATTCTTTT	326	False	NA	4	True	AATAAA	-12	NA	158609932	158628553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
Isoform_111136_16	chr2	+	2478	4	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	130.561181911862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGATTCTTTTTGT	407	False	NA	7	True	AATAAA	-15	NA	158610013	158628556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_158610508_158621764_158622147_158625052_158625178_158627079
Isoform_111139_10	chr2	+	3227	22	FSM	ENSMUSG00000027655.15	ENSMUST00000145692.8	3249	22	19	3	-4	-3	multi-exon	FALSE	canonical	3	5	junction_4	22.9958095364314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATGTTTCTCCTGTCTG	NA	False	NA	25	True	AGTAAA	-16	NA	158636800	158700131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657329_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
Isoform_111140_4	chr2	+	4673	22	FSM	ENSMUSG00000027655.15	ENSMUST00000145692.8	3249	22	1	-1425	1	1425	multi-exon	FALSE	canonical	3	5	junction_4	22.9958095364314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAACAAAACCAGGGTGA	NA	False	NA	NA	False	ATTAAA	-14	NA	158636782	158701559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657329_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
Isoform_111141_212	chr2	+	3217	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	67	0	9	0	multi-exon	FALSE	canonical	3	62	junction_9	12.5862106454921	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTCTCCTGTCTGTGG	NA	False	NA	28	True	AGTAAA	-19	NA	158636793	158700134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
Isoform_111142_26	chr2	+	3289	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	-5	0	-5	0	multi-exon	TRUE	canonical	3	62	junction_9	12.5862106454921	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTCTCCTGTCTGTGG	NA	False	NA	28	True	AGTAAA	-19	NA	158636721	158700134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
Isoform_111143_7	chr2	+	4597	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	74	-1387	-4	1387	multi-exon	FALSE	canonical	3	62	junction_9	12.5862106454921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTATGTCAGCCAGCCAA	NA	False	NA	NA	False	AATAAA	-9	NA	158636800	158701521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
Isoform_111147_3	chr2	+	2121	2	FSM	ENSMUSG00000078955.4	ENSMUST00000128681.2	575	2	41	-1587	41	1587	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTGTAATGTAGTAAATA	NA	False	NA	NA	False	NA	NA	NA	160425317	160428698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_160425531_160426790
Isoform_111159_703	chr2	+	3763	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	91	2	-1	-2	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTAGCGTCTGCCTGTTT	NA	False	NA	21	True	AATAAA	-19	NA	160487898	160564682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
Isoform_111163_31	chr2	+	3852	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	0	4	0	-4	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTAGCGTCTGCCTGT	NA	False	NA	19	True	AATAAA	-17	NA	160487807	160564680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
Isoform_111185_7	chr2	+	5374	32	ISM	ENSMUSG00000016933.18	ENSMUST00000103115.8	4435	34	-41	12468	-31	6	5prime_fragment	FALSE	canonical	3	165	junction_14	24.1792646006555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTGTTTGTTTCTTGG	NA	False	NA	22	True	AATAAA	-23	NA	160573188	160605212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658
Isoform_111186_348	chr2	+	5187	33	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	3	165	junction_14	23.8978947817585	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTAACTTGTTTGTTTC	NA	False	NA	18	True	AATAAA	-19	NA	160573201	160605208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
Isoform_111187_5	chr2	+	4306	33	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-41	-118	combination_of_known_junctions	FALSE	canonical	3	165	junction_14	23.8978947817585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGAGGTGGGTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	160573178	160604304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
Isoform_111189_72	chr2	+	5153	32	FSM	ENSMUSG00000016933.18	ENSMUST00000109462.8	5107	32	-39	-7	-5	7	multi-exon	FALSE	canonical	3	165	junction_13	22.7747418375012	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTGTTTGTTTCTTGGG	NA	False	NA	23	True	AATAAA	-24	NA	160573613	160605213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
Isoform_111199_58	chr2	+	3398	20	FSM	ENSMUSG00000027412.13	ENSMUST00000040872.13	3458	20	57	3	-6	2	multi-exon	TRUE	canonical	3	25	junction_3	8.54837950981163	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTGAGAACCACGGTC	NA	False	NA	NA	False	NA	NA	NA	160730084	160747919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
Isoform_111204_40	chr2	+	1883	7	FSM	ENSMUSG00000016921.15	ENSMUST00000017065.15	1666	7	-34	-183	0	1	multi-exon	FALSE	canonical	3	50	junction_2	407.538443994347	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGATTGCCTTATTGAAT	NA	False	NA	15	True	AATAAA	-13	NA	162773447	162777129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_111205_21	chr2	+	2027	7	FSM	ENSMUSG00000016921.15	ENSMUST00000017065.15	1666	7	-34	-327	0	145	multi-exon	FALSE	canonical	3	50	junction_2	407.538443994347	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCTGTTAATCTACC	NA	False	NA	10	True	AATAAA	-23	NA	162773447	162777273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_111207_506	chr2	+	1753	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	1774	0	139	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATTTTGTGCTGTTAA	NA	False	NA	4	True	AATAAA	-17	NA	162773447	162777267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_111209_383	chr2	+	3525	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	2	0	-2	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGTTCTTCATTTAT	NA	False	NA	15	True	AATAAA	-16	NA	162773447	162779039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_111210_569	chr2	+	1615	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	1912	0	1	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGATTGCCTTATTGAAT	NA	False	NA	15	True	AATAAA	-13	NA	162773447	162777129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_111211_46	chr2	+	3564	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	-40	3	-40	-3	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGTTCTTCATTTA	NA	False	NA	14	True	AATAAA	-15	NA	162773407	162779038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_111223_13	chr2	+	1621	5	ISM	ENSMUSG00000017868.17	ENSMUST00000018012.14	2693	14	11877	1	1095	0	3prime_fragment	FALSE	canonical	3	12	junction_3	4.54835134966506	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTACTGGGTATGGTT	NA	False	NA	13	True	ATTAAA	-14	NA	162841126	162856046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_162841189_162845191_162845288_162846066_162846223_162848713_162848804_162854829
Isoform_111226_353	chr2	+	2112	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	131	5	-6	-5	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	14	True	ATTAAA	-26	NA	162859404	162888056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_111228_14	chr2	+	2536	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	121	-409	-16	409	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162859394	162888470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_111230_19	chr2	+	1992	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-16	-5	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	106.160567612002	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	14	True	ATTAAA	-26	NA	162859394	162888056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_111231_31	chr2	+	2235	13	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-6	-5	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	92.6614207148201	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	14	True	ATTAAA	-26	NA	162859404	162888056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_162859577_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_111255_9557	chr2	+	2701	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-63	1013	-63	976	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	9557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896543	162925595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
Isoform_111256_1880	chr2	+	2731	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-88	1008	-88	981	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162896518	162925600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
Isoform_111257_1647	chr2	+	3673	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-22	0	-22	0	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGACTCCTCCTTTTT	NA	False	NA	26	True	NA	NA	NA	162896584	162926608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
Isoform_111258_291	chr2	+	3760	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-109	0	-109	0	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGACTCCTCCTTTTT	NA	False	NA	26	True	NA	NA	NA	162896497	162926608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
Isoform_111277_370	chr2	+	2278	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	975	combination_of_known_splicesites	FALSE	canonical	3	127	junction_7	831.247339177028	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896542	162925594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
Isoform_111352_15	chr2	+	3417	3	NNC	ENSMUSG00000086152.2	novel	714	3	NA	NA	9	2393	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	162964534	162988272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_162964699_162982755_162983125_162985388
Isoform_111354_9	chr2	+	4517	5	FSM	ENSMUSG00000017679.17	ENSMUST00000171696.8	4522	5	3	2	3	-2	multi-exon	FALSE	canonical	2	4	junction_1	8.69985632065266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCATTGTGGTTTTTA	5694	False	NA	NA	False	AATAAA	-15	NA	163444236	163460930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_163444335_163449128_163449595_163453678_163453873_163455654_163455766_163457282
Isoform_111355_36	chr2	+	4501	5	FSM	ENSMUSG00000017679.17	ENSMUST00000109408.10	1999	5	8	-2510	8	-2	multi-exon	FALSE	canonical	3	17	junction_1	3.8405728739343	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCATTGTGGTTTTTA	5707	False	NA	NA	False	AATAAA	-15	NA	163444249	163460930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_163444335_163449131_163449595_163453678_163453873_163455654_163455766_163457282
Isoform_111356_13	chr2	+	1114	5	FSM	ENSMUSG00000035268.15	ENSMUST00000099105.9	640	5	-9	-465	7	1	multi-exon	FALSE	canonical	3	7	junction_1	187.314408148439	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTATGATCTTTTCTT	8610	False	NA	9	True	AATAAA	-19	NA	163500325	163568073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_163500413_163501069_163501156_163545405_163545476_163563047_163563222_163567376
Isoform_111359_454	chr2	+	1027	4	FSM	ENSMUSG00000035268.15	ENSMUST00000064703.13	1036	4	8	1	-8	1	multi-exon	FALSE	canonical	3	323	junction_1	29.6348143611905	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTATGATCTTTTCTT	8611	False	NA	9	True	AATAAA	-19	NA	163500326	163568073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_163500413_163545405_163545476_163563047_163563222_163567376
Isoform_111360_75	chr2	+	957	3	FSM	ENSMUSG00000035268.15	ENSMUST00000164399.8	983	3	21	5	-8	1	multi-exon	FALSE	canonical	3	64	junction_1	157.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTATGATCTTTTCTT	8611	False	NA	9	True	AATAAA	-19	NA	163500326	163568073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_163500413_163563047_163563222_163567376
Isoform_111368_698	chr2	+	2808	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	204	1	204	-1	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	698	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTGTGGATTGATGT	NA	False	NA	20	True	AATAAA	-15	NA	163837083	163860507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
Isoform_11137_3	chr10	+	296	1	Intergenic	novelGene_825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	42172842	42173138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_42172800_42173100
Isoform_11138_3	chr10	+	192	1	Intergenic	novelGene_826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTTTAAAAAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	42174026	42174218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_42174000_42174200
Isoform_111384_8	chr2	+	1652	10	ISM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	-29	37155	-29	0	5prime_fragment	FALSE	canonical	3	214	junction_9	13.5819415328763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTTTCCTGTTTTGT	NA	False	NA	NA	False	TATAAA	-16	NA	163916028	163960289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888
Isoform_111388_440	chr2	+	5221	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	10	1	10	-1	multi-exon	FALSE	canonical	3	214	junction_9	12.953763931769	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCCCCTTTCTTCAC	NA	False	NA	17	True	AATAAA	-17	NA	163916067	163997443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
Isoform_111392_220	chr2	+	1028	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	36	542	7	-542	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGCCAGTACCTTTGC	NA	False	NA	36	True	AATAAA	-30	NA	164302926	164306886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_111395_25	chr2	+	1575	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	36	-5	7	1	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTGTACTTAAGTCA	NA	False	NA	NA	False	CATAAA	-19	NA	164302926	164307433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_111396_42	chr2	+	1063	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	2	541	2	-541	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGCCAGTACCTTTGCT	NA	False	NA	37	True	AATAAA	-31	NA	164302892	164306887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_111397_43	chr2	+	1406	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	36	164	7	-164	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAACTGTGGCAGGAGT	NA	False	NA	10	True	NA	NA	NA	164302926	164307264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_111398_10	chr2	+	1149	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	-89	546	-89	-546	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGACAGCCAGTACCT	NA	False	NA	32	True	AATAAA	-26	NA	164302801	164306882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_111399_8	chr2	+	1486	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	-45	165	-45	-165	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTCAACTGTGGCAGGAG	NA	False	NA	9	True	NA	NA	NA	164302845	164307263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_1114_1013	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10529.1711924538	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
Isoform_11140_3	chr11	-	3962	33	FSM	ENSMUSG00000023764.19	ENSMUST00000081318.13	3969	33	-31	38	1	0	multi-exon	FALSE	canonical	0	0	junction_15	28.2531628483874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	8004	False	NA	-2	True	AATGAA	-15	NA	3143438	3081887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3093694_3093791_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_111402_12	chr2	+	950	3	ISM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	286	542	-52	-542	3prime_fragment	FALSE	canonical	3	303	junction_1	8.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGCCAGTACCTTTGC	NA	False	NA	36	True	AATAAA	-30	NA	164303176	164306886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_164303450_164305220_164305289_164306277
Isoform_111403_3	chr2	+	1063	4	FSM	ENSMUSG00000017734.16	ENSMUST00000069385.15	1658	4	85	510	59	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCACCTCATTCTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	164328459	164332685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164328608_164330161_164330309_164330487_164330626_164332055
Isoform_111404_10	chr2	+	1700	9	FSM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	9	3	-2	-3	multi-exon	FALSE	canonical	3	60	junction_7	35.1212186576719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACATCACTGTTAATCAT	5136	False	NA	NA	False	ATTAAA	-21	NA	164339463	164345037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
Isoform_111405_150	chr2	+	2485	14	NNC	ENSMUSG00000017721.16	novel	2611	13	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	55.0155437960182	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCGTTGCTTCCTTCCTA	5124	False	NA	6	True	AATAAA	-15	NA	164339451	164350220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194_164349454_164349485_164349719_164349750
Isoform_111406_438	chr2	+	712	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	136	1	1	-1	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCTTGCCTCACTTT	249	False	NA	25	True	AATAAA	-31	NA	164404634	164410429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
Isoform_111408_114	chr2	+	857	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	-9	1	-9	-1	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCTTGCCTCACTTT	104	False	NA	25	True	AATAAA	-31	NA	164404489	164410429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
Isoform_11141_21	chr11	-	3871	32	FSM	ENSMUSG00000023764.19	ENSMUST00000066391.14	3898	32	21	6	-3	0	multi-exon	FALSE	canonical	2	8	junction_15	27.928964448237	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	8000	False	NA	-1	True	AATGAA	-16	NA	3143442	3081886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_111410_36	chr2	+	757	6	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_4	216.583101833915	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGCCTCACTTTCTT	249	False	NA	28	True	AATAAA	-34	NA	164404634	164410432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164409269_164409312_164410254
Isoform_111415_25	chr2	+	568	4	NIC	ENSMUSG00000017723.12	novel	849	5	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	229.843908386153	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCTTGCCTCACTTT	249	False	NA	25	True	AATAAA	-31	NA	164404634	164410429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_164404725_164405976_164406133_164407711_164407859_164410254
Isoform_111418_15	chr2	+	586	3	FSM	ENSMUSG00000017723.12	ENSMUST00000109344.9	429	3	-162	5	-42	-5	multi-exon	FALSE	canonical	3	78	junction_1	240.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACACCTGCTTGCCTCA	71	False	NA	21	True	AATAAA	-27	NA	164404456	164410425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164404725_164407711_164407859_164410254
Isoform_111419_28	chr2	+	412	3	FSM	ENSMUSG00000017723.12	ENSMUST00000109344.9	429	3	16	1	1	-1	multi-exon	FALSE	canonical	3	78	junction_1	240.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCTTGCCTCACTTT	249	False	NA	25	True	AATAAA	-31	NA	164404634	164410429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164404725_164407711_164407859_164410254
Isoform_111427_43	chr2	+	895	8	ISM	ENSMUSG00000017299.14	ENSMUST00000109327.4	656	9	-13	2004	4	-3	5prime_fragment	FALSE	canonical	3	592	junction_6	60.090408076973	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTTGTGTTGTGTTC	NA	False	NA	10	True	NA	NA	NA	164587937	164601476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171
Isoform_11143_3	chr11	-	3665	30	NIC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	3	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	29.4824964698972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	8006	False	NA	-1	True	AATGAA	-16	NA	3143436	3081886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_111431_522	chr2	+	1253	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	22	389	-9	-389	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGGTAGTGAGCCTGC	NA	False	NA	13	True	ATTAAA	-13	NA	164587924	164610138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
Isoform_111432_20	chr2	+	1642	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	22	0	-9	0	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGTTTTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	164587924	164610527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
Isoform_111437_2467	chr2	+	932	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	31	4	26	-4	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	2467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTTTCTCAAGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	164611848	164614823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
Isoform_111439_747	chr2	+	963	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	0	4	0	-4	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTTTCTCAAGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	164611817	164614823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
Isoform_11144_4	chr11	-	4452	29	NIC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	-3	0	intron_retention	FALSE	canonical	2	2	junction_24	29.2501526247544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	8000	False	NA	-1	True	AATGAA	-16	NA	3143442	3081886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_111449_14	chr2	+	1501	3	FSM	ENSMUSG00000050373.14	ENSMUST00000172577.8	1825	3	43	281	17	147	multi-exon	FALSE	canonical	3	11	junction_2	7.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGCAATCTCTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	164627953	164634691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164628245_164628617_164628769_164633632
Isoform_11145_3	chr11	-	4035	32	NIC	ENSMUSG00000023764.19	novel	3969	33	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_14	28.4125618918292	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	8015	False	NA	-2	True	AATGAA	-15	NA	3143427	3081887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3093694_3093791_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_111450_16	chr2	+	1508	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	43	1039	17	147	multi-exon	FALSE	canonical	3	13	junction_2	6.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGCAATCTCTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	164627953	164634691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164628245_164628617_164628776_164633632
Isoform_111452_247	chr2	+	2700	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	4	4	4	-4	multi-exon	FALSE	canonical	3	86	junction_1	0	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACGTTTGTGTTTTTTGA	3067	False	NA	18	True	AATAAA	-18	NA	164647021	164664046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164647352_164661676
Isoform_11146_4	chr11	-	3954	31	NIC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	-3	0	intron_retention	FALSE	canonical	2	8	junction_14	28.1168395568682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	8000	False	NA	-2	True	AATGAA	-15	NA	3143442	3081887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_111461_1615	chr2	+	2373	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	329	3	2	-3	multi-exon	FALSE	canonical	3	571	junction_1	0	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTCGTGTCTTGTCTGGT	8856	False	NA	13	True	AATAAA	-16	NA	164664934	164668788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164665121_164666601
Isoform_111463_58	chr2	+	2419	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	284	2	-43	-2	multi-exon	FALSE	canonical	3	571	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCGTGTCTTGTCTGGTT	8811	False	NA	14	True	AATAAA	-17	NA	164664889	164668789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164665121_164666601
Isoform_111466_1877	chr2	+	1819	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	905	1449	-1	-436	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	1877	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTCTTCTCTGTGGC	NA	False	NA	17	True	ATTAAA	-17	NA	164675725	164681503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
Isoform_111469_23	chr2	+	3266	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	907	0	1	0	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCTCAGTGTGGTGG	NA	False	NA	NA	False	ATTAAA	-11	NA	164675727	164682952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
Isoform_111471_36	chr2	+	1906	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-1	-438	intron_retention	FALSE	canonical	3	800	junction_1	81.5756809102831	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGGGCTCTTCTCTGTG	NA	False	NA	15	True	ATTAAA	-15	NA	164675725	164681501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
Isoform_111478_71	chr2	+	1957	14	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	974	436	0	-436	3prime_fragment	FALSE	canonical	3	937	junction_10	54.6384566651142	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTCTTCTCTGTGGC	NA	False	NA	17	True	ATTAAA	-17	NA	164675766	164681503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
Isoform_11148_6	chr11	-	677	5	ISM	ENSMUSG00000023764.19	ENSMUST00000138126.8	2916	22	-21	44341	-3	6295	5prime_fragment	FALSE	canonical	3	72	junction_1	15.833114033569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCTTTTGAGCATAAG	8000	False	NA	NA	False	AGTAAA	-27	NA	3143442	3129272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_111483_27	chr2	+	2068	13	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	0	-436	intron_retention	FALSE	canonical	3	937	junction_9	56.2506790082474	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTCTTCTCTGTGGC	NA	False	NA	17	True	ATTAAA	-17	NA	164675766	164681503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
Isoform_111489_105	chr2	+	515	2	FSM	ENSMUSG00000039849.7	ENSMUST00000145327.2	611	2	64	32	11	-32	multi-exon	FALSE	canonical	3	441	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCGTTAACAACCAGT	5960	False	NA	12	True	AATAAA	-22	NA	164721287	164725087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164721410_164724694
Isoform_111493_13	chr2	+	2789	16	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	13	3080	13	-3080	intron_retention	FALSE	canonical	3	171	junction_4	62.5944264469467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTGTGAGGGTCTTGG	5962	False	NA	14	True	AATACA	-12	NA	164721289	164733294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518
Isoform_111494_557	chr2	+	2689	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	11	3080	11	-3080	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTGTGAGGGTCTTGG	5960	False	NA	14	True	AATACA	-12	NA	164721287	164733294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
Isoform_111497_34	chr2	+	5765	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	11	4	11	-4	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGAGTGGCCACAGACA	5960	False	NA	5	True	AATAAA	-12	NA	164721287	164736370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
Isoform_111498_8	chr2	+	2615	17	NIC	ENSMUSG00000039849.7	novel	677	2	NA	NA	2	-3077	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	47.1206894580289	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGAGGGTCTTGGGGC	6646	False	NA	17	True	AATACA	-15	NA	164721973	164733297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_164722019_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
Isoform_11150_7	chr11	-	846	5	FSM	ENSMUSG00000023764.19	ENSMUST00000118627.2	831	5	-11	-4	4	4	multi-exon	FALSE	canonical	3	18	junction_1	37.5724300518346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGCACTTTGTTATTT	8007	False	NA	NA	False	NA	NA	NA	3143435	3135563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3135975_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_111501_3	chr2	+	1202	3	NNC	ENSMUSG00000085436.2	novel	1127	2	NA	NA	55	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTTTGGATACGGTG	7295	False	NA	NA	False	NA	NA	NA	164753328	164761874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_164753671_164756011_164756141_164761143
Isoform_111502_4	chr2	+	1523	7	ISM	ENSMUSG00000017737.3	ENSMUST00000017881.3	3175	13	2510	713	33	-713	3prime_fragment	FALSE	canonical	1	2	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCAATCAGCTTATCT	6616	False	NA	NA	False	AATAAA	-28	NA	164792648	164797057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_164792922_164793026_164793183_164794339_164794674_164794774_164794915_164795183_164795335_164795438_164795543_164796692
Isoform_111504_5	chr2	+	1295	9	FSM	ENSMUSG00000017652.17	ENSMUST00000017799.12	2986	9	16	1675	7	273	multi-exon	FALSE	canonical	3	6	junction_1	6.06217782649107	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGACATCTCAGAAACTC	NA	False	NA	NA	False	NA	NA	NA	164897562	164913193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_164897679_164904205_164904285_164904580_164904707_164904941_164905089_164905387_164905482_164908422_164908485_164911548_164911636_164911736_164911769_164912641
Isoform_111505_3	chr2	+	3423	5	FSM	ENSMUSG00000027661.5	ENSMUST00000029196.5	3544	5	116	5	116	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCATATGGTGATTTATA	NA	False	NA	NA	False	AATAAA	-15	NA	165345822	165361832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_165345969_165356345_165357618_165358152_165358276_165359536_165359673_165360086
Isoform_111507_9	chr2	+	2463	16	FSM	ENSMUSG00000017897.19	ENSMUST00000088132.13	2447	16	-10	-6	-10	-2	multi-exon	FALSE	canonical	0	0	junction_1	2.44040069569642	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGCTTCAGTGAAGTGG	NA	False	NA	97	True	AATAAA	-18	NA	165436941	165613645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_165437185_165506705_165506807_165524756_165524803_165527468_165527612_165529538_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165596360_165596451_165603823_165603883_165605616_165605778_165608134_165608250_165608956_165609079_165611144_165611246_165612953
Isoform_111512_83	chr2	+	5728	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	25	1778	25	-6	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	NA	False	NA	10	True	ATTAAA	-16	NA	165834581	165913384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_111513_95	chr2	+	5224	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	2	2305	2	-533	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGGTCCTGCACTCTG	NA	False	NA	14	True	AATAAA	-14	NA	165834558	165912857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_111514_20	chr2	+	5249	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	-23	2305	-22	-533	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGGTCCTGCACTCTG	NA	False	NA	14	True	AATAAA	-14	NA	165834533	165912857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_111517_11	chr2	+	5775	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	-23	1779	-22	-7	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGTAGCCCACTCAT	NA	False	NA	9	True	ATTAAA	-15	NA	165834533	165913383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_111519_53	chr2	+	5766	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	-16	7	-16	-7	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGTAGCCCACTCAT	NA	False	NA	9	True	ATTAAA	-15	NA	165834539	165913383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_111520_62	chr2	+	5221	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	3	533	2	-533	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGGTCCTGCACTCTG	NA	False	NA	14	True	AATAAA	-14	NA	165834558	165912857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_111523_56	chr2	+	5726	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	26	5	25	-5	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTAGCCCACTCATCA	NA	False	NA	11	True	ATTAAA	-17	NA	165834581	165913385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_111530_3	chr2	-	1168	2	Antisense	novelGene_ENSMUSG00000027678.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCCAGGGCACCGTGG	NA	False	NA	NA	False	NA	NA	NA	165912542	165910943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_165911299_165911729
Isoform_111531_3	chr2	+	2800	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	12	1614	12	-1614	multi-exon	FALSE	canonical	3	131	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCCCCTCCCCCCACA	NA	False	NA	NA	False	NA	NA	NA	166635698	166639811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166635989_166637301
Isoform_111533_128	chr2	+	1584	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	24	2818	24	772	multi-exon	FALSE	canonical	3	131	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATCTTTTAATATTTAT	NA	False	NA	NA	False	NA	NA	NA	166635710	166638607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166635989_166637301
Isoform_111535_3	chr2	+	4032	25	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-45	30188	-45	18893	5prime_fragment	FALSE	canonical	3	156	junction_4	16.1690290370201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGGCTGGGACTATA	NA	False	NA	NA	False	AATAAA	-21	NA	166647462	166709784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207
Isoform_111536_4	chr2	+	4944	33	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-53	19246	-53	-19246	5prime_fragment	TRUE	canonical	3	156	junction_4	18.8198438738875	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCCTATGTGTTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	166647454	166720726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437
Isoform_111537_171	chr2	+	5929	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-33	2874	-33	-2874	multi-exon	FALSE	canonical	3	156	junction_4	19.7687636593819	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAAGTGCGCGGTGTTTTG	NA	False	NA	13	True	AATAAA	-25	NA	166647474	166737098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
Isoform_111539_61	chr2	+	8814	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-53	9	-53	-9	multi-exon	FALSE	canonical	3	156	junction_4	19.7687636593819	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAAAGCTGCTCCCAG	NA	False	NA	NA	False	AATAAA	-7	NA	166647454	166739963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
Isoform_111551_4	chr2	+	1034	4	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	84640	2874	62571	-2874	3prime_fragment	FALSE	canonical	3	194	junction_1	17.0163320241336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAAGTGCGCGGTGTTTTG	NA	False	NA	13	True	AATAAA	-25	NA	166732147	166737098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_166732358_166733686_166733826_166735420_166735539_166736531
Isoform_111553_7	chr2	+	3867	3	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	86007	3	63938	-3	3prime_fragment	FALSE	canonical	3	208	junction_2	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCTCCCAGTGTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	166733514	166739969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_166733826_166735420_166735539_166736531
Isoform_111559_892	chr2	+	3501	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	14	126	14	-126	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747992	166788183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
Isoform_111560_471	chr2	+	3620	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	14	7	14	-7	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAATGGTGGTTTTTAT	NA	False	NA	30	True	CATAAA	-26	NA	166747992	166788302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
Isoform_111561_295	chr2	+	3659	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-21	3	-2	-3	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTGGTTTTTATTGTT	NA	False	NA	34	True	CATAAA	-30	NA	166747957	166788306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
Isoform_111562_468	chr2	+	3537	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-21	125	-2	-125	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTCTTCAGGACAGGA	NA	False	NA	8	True	AATAAA	-20	NA	166747957	166788184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
Isoform_11158_2181	chr11	-	1524	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	7	15	6	-15	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	2181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATGTGTCGTTATTCAT	NA	False	NA	-16	True	TATAAA	-19	NA	3216386	3199921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
Isoform_111599_94	chr2	+	2163	8	FSM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	-19	7	-19	-7	multi-exon	FALSE	canonical	3	722	junction_7	28.1497453499193	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCATAGTATTAT	NA	False	NA	NA	False	NA	NA	NA	166857210	166867726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
Isoform_1116_1047	SIRV6	+	453	3	FSM	SIRV6A	SIRV611	454	3	1	0	1	0	multi-exon	FALSE	canonical	3	2656	junction_1	12443	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1304	1950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_1382_1468_1535_1640
Isoform_11160_44	chr11	-	1615	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-84	15	-62	-15	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATGTGTCGTTATTCAT	NA	False	NA	-16	True	TATAAA	-19	NA	3216477	3199921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
Isoform_111607_1502	chr2	+	2606	21	FSM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	107	1	-10	-1	multi-exon	FALSE	canonical	3	666	junction_12	71.8993045863449	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTGTTGTCTGTGAA	NA	False	NA	NA	False	NA	NA	NA	166857219	166876866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
Isoform_111630_8	chr2	+	653	4	FSM	ENSMUSG00000074578.15	ENSMUST00000143587.3	659	4	2	4	0	-4	multi-exon	FALSE	canonical	3	874	junction_1	54.8351063543137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGCTGTGTCTTGAG	NA	False	NA	31	True	AATAAA	-41	NA	166905140	166907778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353
Isoform_111631_521	chr2	+	447	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	287	4	0	-4	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGCTGTGTCTTGAG	NA	False	NA	31	True	AATAAA	-41	NA	166905140	166907778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
Isoform_111632_21	chr2	+	832	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	-98	4	-98	-4	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGCTGTGTCTTGAG	NA	False	NA	31	True	AATAAA	-41	NA	166904755	166907778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
Isoform_111633_8	chr2	+	662	4	FSM	ENSMUSG00000074578.15	ENSMUST00000125841.3	525	4	-2	-135	0	-5	multi-exon	FALSE	canonical	3	874	junction_1	54.7783412186483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATCTGCTGTGTCTTGA	NA	False	NA	30	True	AATAAA	-40	NA	166905140	166907777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_166905218_166905555_166905648_166907078_166907401_166907606
Isoform_111637_5	chr2	+	1114	2	FSM	ENSMUSG00000039463.15	ENSMUST00000150326.2	2059	2	21	924	2	-924	multi-exon	FALSE	canonical	3	99	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCTAGTCAGGGTAGA	NA	False	NA	NA	False	AATAAA	-14	NA	167263663	167267130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167263686_167266038
Isoform_111638_5	chr2	+	2058	2	FSM	ENSMUSG00000039463.15	ENSMUST00000150326.2	2059	2	2	-1	2	1	multi-exon	FALSE	canonical	3	99	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAACCCATGAGA	NA	False	NA	NA	False	ACTAAA	-8	NA	167263644	167268055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167263686_167266038
Isoform_111639_3	chr2	+	4625	16	ISM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	9	2	0	0	intron_retention	TRUE	non_canonical	2	49	junction_9	20.7025494940975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGTTGTGTCACGTG	NA	False	NA	5	True	AATAAA	-18	NA	167263640	167318918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947
Isoform_111640_127	chr2	+	4510	17	FSM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	11	0	0	0	multi-exon	FALSE	non_canonical	2	49	junction_9	20.9574531790005	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263642	167318920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
Isoform_111647_4	chr2	+	4554	17	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_6	32.5442007122621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTGTTGTGTCACGT	NA	False	NA	4	True	AATAAA	-17	NA	167263642	167318917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288374_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
Isoform_111648_3	chr2	+	5403	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	2	49	junction_8	20.2852984531491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263642	167318919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
Isoform_111653_1052	chr2	+	2139	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	355	8	-2	1	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTAAGCTGCAATGTTT	NA	False	NA	16	True	AATAAA	-17	NA	167345363	167358085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
Isoform_111658_18	chr2	+	1980	5	FSM	ENSMUSG00000006418.18	ENSMUST00000127939.2	1985	5	6	-1	6	1	multi-exon	FALSE	canonical	3	9	junction_1	262.348051260153	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTAAGCTGCAATGTTT	NA	False	NA	16	True	AATAAA	-17	NA	167345371	167358085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167345522_167352795_167352903_167353131_167353247_167354436_167354545_167356585
Isoform_11166_39	chr11	-	3852	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	5	-2311	4	2311	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGCCTTGGTGTTTTCT	NA	False	NA	-1	True	NA	NA	NA	3216388	3197595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
Isoform_111662_20	chr2	+	1610	3	FSM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	7	4	7	-4	multi-exon	FALSE	canonical	2	7	junction_2	2	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGCTCAGTGTTGGGG	4762	False	NA	NA	False	AATAAA	-20	NA	167380121	167384730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167380292_167380590_167381119_167383818
Isoform_111664_5	chr2	+	4288	11	NNC	ENSMUSG00000027540.14	novel	4292	10	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	53.0479971346704	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGATGTGCTTGCCTTT	1071	False	NA	12	True	AATAAA	-18	NA	167774257	167821307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_167774477_167793875_167794000_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344_167820346_167820385
Isoform_111667_120	chr2	+	1746	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	39	2428	-6	2220	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGCAGGTTTTTGTTAT	1099	False	NA	NA	False	AAAAAG	-32	NA	167774285	167818877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
Isoform_111668_54	chr2	+	4158	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	47	8	2	-8	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACACAGGCGTGATGT	1107	False	NA	2	True	AATAAA	-8	NA	167774293	167821297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
Isoform_111670_364	chr2	+	3422	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	-23	0	-23	0	multi-exon	FALSE	canonical	3	144	junction_1	5.5	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTGTTTGAAATTACA	NA	False	NA	NA	False	AATAAA	-22	NA	167922900	167943123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167923280_167929261_167929485_167940303
Isoform_111671_33	chr2	+	3450	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	-58	7	-58	-7	multi-exon	FALSE	canonical	3	144	junction_1	5.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTACTTTCTTGTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	167922865	167943116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167923280_167929261_167929485_167940303
Isoform_111680_500	chr2	+	678	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	203	54	-7	2	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCTATATTATTATTT	4045	False	NA	14	True	ATTAAA	-17	NA	170353357	170360989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
Isoform_111683_11	chr2	+	727	4	FSM	ENSMUSG00000052033.14	ENSMUST00000109148.8	736	4	-46	55	29	1	multi-exon	FALSE	canonical	3	14	junction_1	387.259029017472	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4081	False	NA	13	True	ATTAAA	-16	NA	170353393	170360988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_170353476_170357658_170357767_170358469_170358611_170360592
Isoform_111684_8	chr2	+	1124	5	NNC	ENSMUSG00000052033.14	novel	666	4	NA	NA	-11	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	415.990684991864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4041	False	NA	13	True	ATTAAA	-16	NA	170353353	170360988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_170353614_170353638_170353858_170357658_170357767_170358469_170358611_170360592
Isoform_111688_3	chr2	+	1705	8	FSM	ENSMUSG00000027560.5	ENSMUST00000029075.5	1768	8	63	0	63	0	multi-exon	FALSE	canonical	0	0	junction_2	9.45666809339164	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTAGTTCTTTCTGCAC	NA	False	NA	14	True	AATAAA	-15	NA	170573789	170721689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_170574109_170642769_170642878_170671759_170671875_170671988_170672109_170674801_170674992_170683339_170683476_170712730_170712852_170721093
Isoform_111689_46	chr2	+	3560	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	57	0	57	0	multi-exon	FALSE	canonical	3	138	junction_1	7.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTCTGCCGTCTGGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	172187541	172197669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172187768_172193374_172193545_172194505
Isoform_111690_90	chr2	+	789	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	39	2789	39	-2789	multi-exon	FALSE	canonical	3	138	junction_1	7.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTTCCTCATGTACAT	NA	False	NA	NA	False	NA	NA	NA	172187523	172194880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172187768_172193374_172193545_172194505
Isoform_111691_51	chr2	+	1703	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	49	1865	49	-1865	multi-exon	FALSE	canonical	3	138	junction_1	7.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATGTCTTAATTAGG	NA	False	NA	NA	False	AATACA	-10	NA	172187533	172195804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172187768_172193374_172193545_172194505
Isoform_111693_3	chr2	+	855	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	-44	2806	-44	-2806	multi-exon	FALSE	canonical	3	138	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTTTTTTTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	172187440	172194863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172187768_172193374_172193545_172194505
Isoform_111694_16	chr2	+	4310	5	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	7	-1369	intron_retention	FALSE	canonical	3	132	junction_1	114.73120761153	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCACTGTTCCTCCTTC	NA	False	NA	13	True	AATAAA	-13	NA	172212607	172222999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535
Isoform_111695_9	chr2	+	5682	5	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	1	-3	intron_retention	FALSE	canonical	3	132	junction_1	114.73120761153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACGTGACGTAAAGGTAG	NA	False	NA	10	True	AATAAA	-17	NA	172212601	172224365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535
Isoform_111696_206	chr2	+	1974	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	-3	-1362	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCCTCCTTCTTCACGT	NA	False	NA	20	True	AATAAA	-20	NA	172212597	172223006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
Isoform_111697_97	chr2	+	3325	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGACGTAAAGGTAGTT	NA	False	NA	12	True	AATAAA	-19	NA	172212607	172224367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
Isoform_111699_43	chr2	+	4193	5	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	244	1367	244	-1367	intron_retention	FALSE	canonical	3	206	junction_1	83.4056353012193	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTTCCTCCTTCTT	NA	False	NA	15	True	AATAAA	-15	NA	172212897	172223001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535
Isoform_111701_169	chr2	+	3205	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	244	2	244	-2	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACGTGACGTAAAGGTAGT	NA	False	NA	11	True	AATAAA	-18	NA	172212897	172224366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
Isoform_111702_238	chr2	+	1840	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	244	1367	244	-1367	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTTCCTCCTTCTT	NA	False	NA	15	True	AATAAA	-15	NA	172212897	172223001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
Isoform_111713_424	chr2	+	2120	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	47	6	1	-6	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGGGGGGGTTGGTT	NA	False	NA	10	True	AATAAA	-10	NA	172282522	172311822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
Isoform_111714_268	chr2	+	1114	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	22	1037	22	-1037	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCGTGGTCACTTGCTG	NA	False	NA	10	True	TATAAA	-21	NA	172282497	172310791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
Isoform_111715_1315	chr2	+	2827	7	FSM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	1	10	1	5	multi-exon	FALSE	canonical	3	551	junction_1	51.676611946046	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGAAAGTCTGGTTCT	NA	False	NA	15	True	AATAAA	-17	NA	172391513	172400532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_11172_13	chr11	-	916	5	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	7429	1221	4105	-1221	3prime_fragment	FALSE	canonical	3	202	junction_1	18.3354165483089	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	NA	False	NA	-22	True	GATAAA	-16	NA	3298712	3295476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593
Isoform_111727_191	chr2	+	2727	7	FSM	ENSMUSG00000028640.12	ENSMUST00000170744.2	2776	7	47	2	47	-2	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	20	True	AATAAA	-22	NA	172392957	172400537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_111728_22	chr2	+	3085	7	FSM	ENSMUSG00000028640.12	ENSMUST00000099058.10	2985	7	-100	0	29	0	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172392601	172400539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_11173_8	chr11	-	2135	5	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	7429	2	4105	-2	3prime_fragment	FALSE	canonical	3	202	junction_1	18.3354165483089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGACAGAGAGTGCCAA	NA	False	NA	-8	True	AATAAA	-17	NA	3298712	3294257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593
Isoform_111755_1627	chr2	+	1659	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	24	59	17	-59	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841933	172857473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
Isoform_111756_56	chr2	+	1704	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	37	1	30	-1	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTATGTTCCAAGTTTCT	NA	False	NA	84	True	NA	NA	NA	172841946	172857531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
Isoform_11176_161	chr11	-	2486	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-14	1221	-14	-1221	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	9800	False	NA	-22	True	GATAAA	-16	NA	3321390	3295476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
Isoform_111762_19	chr2	+	3288	11	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	16	-59	intron_retention	FALSE	canonical	3	1013	junction_9	110.218011232285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841932	172857473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
Isoform_111767_78	chr2	+	1718	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173878.8	936	4	31	-813	17	1	multi-exon	FALSE	canonical	0	0	junction_1	369.719713657071	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863722	172876519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172864041_172864584_172864709_172865119_172865175_172875298
Isoform_111768_1210	chr2	+	1741	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	28	-1	17	1	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863722	172876519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
Isoform_111769_145	chr2	+	1771	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	-2	-1	1	1	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863692	172876519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
Isoform_11177_81	chr11	-	3707	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-14	0	-14	0	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	9800	False	NA	-6	True	AATAAA	-19	NA	3321390	3294255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
Isoform_111772_28	chr2	+	1878	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173720.2	620	4	-182	-1076	16	1	multi-exon	FALSE	canonical	3	8	junction_1	365.954763446097	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863721	172876519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172864200_172864584_172864709_172865119_172865175_172875298
Isoform_111773_19	chr2	+	1965	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173997.2	440	4	-508	-1017	17	1	multi-exon	FALSE	canonical	2	17	junction_1	361.719351001421	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863722	172876519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172864288_172864584_172864709_172865119_172865175_172875298
Isoform_111774_71	chr2	+	2262	3	FSM	ENSMUSG00000027510.18	ENSMUST00000155512.8	2281	3	17	2	17	1	multi-exon	FALSE	canonical	3	757	junction_2	26	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863722	172876519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_172864709_172865119_172865175_172875298
Isoform_111778_336	chr2	+	1920	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	77	5158	-19	1031	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACTAGTCCTTCCTG	NA	False	NA	7	True	AATAAA	-20	NA	173501629	173543978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
Isoform_111784_6	chr2	+	3355	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	52	3748	-44	2441	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGTCCTTCAGTGTAA	NA	False	NA	NA	False	ATTAAA	-23	NA	173501604	173545388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
Isoform_111785_21	chr2	+	7053	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	99	3	3	-3	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTGTGGCATTCATT	NA	False	NA	24	True	AATAAA	-37	NA	173501651	173549133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
Isoform_111786_15	chr2	+	1828	6	FSM	ENSMUSG00000027519.11	ENSMUST00000142820.8	7045	6	87	5130	-9	1031	multi-exon	FALSE	canonical	3	18	junction_2	72.9191332916128	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACTAGTCCTTCCTG	NA	False	NA	7	True	AATAAA	-20	NA	173501639	173543978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173501935_173503224_173503305_173536902_173536975_173537051_173537159_173537682_173537793_173542814
Isoform_111788_317	chr2	+	1955	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	98	4979	98	1235	multi-exon	FALSE	canonical	3	50	junction_2	5.74804314527997	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCATTTTGTCACAT	NA	False	NA	21	True	AATAAA	-18	NA	173579401	173621153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
Isoform_111789_14	chr2	+	2077	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	-24	4979	-24	1235	multi-exon	FALSE	canonical	3	50	junction_2	5.74804314527997	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCATTTTGTCACAT	NA	False	NA	21	True	AATAAA	-18	NA	173579279	173621153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
Isoform_111790_27	chr2	+	951	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	66	6015	66	199	multi-exon	FALSE	canonical	3	50	junction_2	5.74804314527997	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACAGGTCTTGCCTTTA	NA	False	NA	13	True	AAAAAG	-20	NA	173579369	173620117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
Isoform_111791_5	chr2	+	1879	5	NIC	ENSMUSG00000054455.6	novel	7032	6	NA	NA	63	1228	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.2722674091582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTCCTTTTGTCATTTT	NA	False	NA	14	True	AATAAA	-11	NA	173579366	173621146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_173579544_173603909_173604063_173616186_173616268_173617904_173618082_173619855
Isoform_111794_9	chr2	+	4359	9	FSM	ENSMUSG00000027522.16	ENSMUST00000087908.10	3865	9	-603	109	1	-108	multi-exon	FALSE	canonical	1	10	junction_1	35.0633355515416	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGACTTTTTTTTTGTCC	NA	False	NA	17	True	AATAAA	-26	NA	173918111	173941455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173918983_173926438_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
Isoform_111795_7	chr2	+	4468	9	FSM	ENSMUSG00000027522.16	ENSMUST00000087908.10	3865	9	-603	0	1	0	multi-exon	FALSE	canonical	1	10	junction_1	35.0633355515416	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCATTCCTAGTATTAA	NA	False	NA	126	True	AATAAA	-24	NA	173918111	173941564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173918983_173926438_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
Isoform_111796_3	chr2	+	2667	8	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	0	1018	intron_retention	FALSE	canonical	3	11	junction_1	29.7787761703546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGACTCTTGCCACTT	NA	False	NA	NA	False	AGTAAA	-21	NA	173918114	173939778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_173918983_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
Isoform_111797_3	chr2	+	4347	8	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	0	-109	intron_retention	TRUE	canonical	3	11	junction_1	29.7787761703546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTTTTTTTTGTC	NA	False	NA	16	True	AATAAA	-25	NA	173918110	173941454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_173918983_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
Isoform_111799_552	chr2	+	2095	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	3	369	3	-1	multi-exon	FALSE	canonical	3	214	junction_9	24.2330284822489	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTCCGCTCACTTT	NA	False	NA	7	True	ATTAAA	-16	NA	173952144	173964494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
Isoform_111802_148	chr2	+	2376	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	2	-1	intron_retention	FALSE	canonical	3	237	junction_8	19.4907670449369	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTCCGCTCACTTT	NA	False	NA	7	True	ATTAAA	-16	NA	173952143	173964494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
Isoform_111804_8	chr2	+	2569	10	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	24	-2	intron_retention	FALSE	canonical	3	247	junction_4	17.3980274176325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952165	173964493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962918_173963271_173963383_173963883
Isoform_111805_14	chr2	+	2450	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	5	-1	intron_retention	FALSE	canonical	2	4	junction_6	108.010925373316	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTCCGCTCACTTT	NA	False	NA	7	True	ATTAAA	-16	NA	173952146	173964494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961297_173961453_173962019_173962121_173962336_173962918_173963271_173963383_173963883
Isoform_111812_31	chr2	+	1582	12	NIC	ENSMUSG00000027523.21	novel	3903	13	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	236.631666212588	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174169551	174188534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_111814_29	chr2	+	1628	12	NIC	ENSMUSG00000027523.21	novel	3903	13	NA	NA	14	-3	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	236.631666212588	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174169505	174188534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_11182_77	chr11	-	3512	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	2	0	2	0	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	3359172	3294255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
Isoform_111823_1671	chr2	+	2227	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	50	2	3	-2	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATATTTTACTCATTTC	NA	False	NA	38	True	AATAAA	-19	NA	174257646	174269293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
Isoform_111824_62	chr2	+	2263	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	17	-1	17	1	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257613	174269296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
Isoform_11183_117	chr11	-	2292	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	1	1221	1	-1221	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	NA	False	NA	-22	True	GATAAA	-16	NA	3359173	3295476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
Isoform_111831_40	chr2	+	2101	14	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	158.919241892815	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257644	174269296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
Isoform_111833_125	chr2	+	2878	13	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	2	1	intron_retention	FALSE	canonical	3	502	junction_10	48.356890810813	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257645	174269296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
Isoform_111842_22	chr2	+	2308	15	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	145.444936631829	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257646	174269296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_174257828_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
Isoform_11185_18	chr11	-	2328	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	-36	1222	-21	-1222	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAAGAGTCTGTTACTC	NA	False	NA	-23	True	GATAAA	-15	NA	3359210	3295477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
Isoform_111851_19	chr2	+	1427	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	5	-513	5	513	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGATTTCACGTGTGCCA	NA	False	NA	NA	False	NA	NA	NA	174852038	174859918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
Isoform_111853_3	chr2	+	1575	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	0	-656	0	656	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	174852033	174860061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
Isoform_111861_3	chr2	+	3093	3	NIC	ENSMUSG00000078906.10	novel	1281	4	NA	NA	-14	1847	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	222.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAACAGAAATATCTGTG	NA	False	NA	2	True	NA	NA	NA	174852019	174862888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_174852115_174858749_174858811_174859951
Isoform_111865_3	chr2	+	1583	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	3092	-650	3014	650	3prime_fragment	FALSE	canonical	3	748	junction_1	226.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAACACCATGACTGT	NA	False	NA	NA	False	NA	NA	NA	174855125	174860055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_174855276_174858430_174858558_174858749
Isoform_111867_7	chr2	+	1442	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	3086	-503	3008	503	3prime_fragment	FALSE	canonical	3	748	junction_1	226.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTGTAAGAAAGATTTC	NA	False	NA	NA	False	NA	NA	NA	174855119	174859908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_174855276_174858430_174858558_174858749
Isoform_111870_8	chr2	+	3285	4	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	3011	1854	combination_of_known_junctions	FALSE	canonical	3	515	junction_3	284.818460700067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATATCTGTGCTGTTAC	NA	False	NA	9	True	NA	NA	NA	174855122	174862895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_174855276_174858430_174858558_174858749_174858811_174859951
Isoform_111872_4	chr2	-	321	3	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3081	-980	combination_of_known_splicesites	FALSE	canonical	3	106	junction_2	291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	5429	False	NA	NA	False	NA	NA	NA	177266911	177261976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_177262087_177263226_177263288_177266761
Isoform_111874_15	chr2	-	1244	3	FSM	ENSMUSG00000078889.12	ENSMUST00000109020.9	3438	3	-7	2201	-7	-315	multi-exon	FALSE	canonical	3	24	junction_1	41.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATGCTATAAATGTG	NA	False	NA	NA	False	NA	NA	NA	175592893	175583350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175584326_175584530_175584658_175592751
Isoform_111876_7	chr2	+	6610	4	FSM	ENSMUSG00000078879.11	ENSMUST00000108985.9	1295	4	1	-5316	1	5316	multi-exon	FALSE	canonical	3	5	junction_3	41.4085337420521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	176362355	176378199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176362453_176370328_176370456_176370661_176370723_176371874
Isoform_111878_11	chr2	+	1452	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	76	-83	9	83	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATTTCACGTGTGC	NA	False	NA	NA	False	NA	NA	NA	175661087	175671532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
Isoform_111879_21	chr2	+	1382	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	66	-3	-1	3	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTAGATTGCTCTGTTCA	NA	False	NA	NA	False	NA	NA	NA	175661077	175671452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
Isoform_111881_8	chr2	+	442	5	NIC	ENSMUSG00000078887.11	novel	599	6	NA	NA	7	-7	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	79.6649232724164	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	175661085	175671677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349_175670411_175671567
Isoform_111885_3	chr2	+	493	4	ISM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	14	4471	10	142	5prime_fragment	FALSE	canonical	3	13	junction_2	10.9848380355227	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATGTATGTAATTATTG	3049	False	NA	NA	False	NA	NA	NA	175968375	175977650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443
Isoform_111886_19	chr2	+	3791	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	32	0	28	0	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	3067	False	NA	NA	False	AATAAA	-25	NA	175968393	175982121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
Isoform_111887_21	chr2	+	1234	3	FSM	ENSMUSG00000078901.9	ENSMUST00000109051.8	3382	3	-19	2167	-19	944	multi-exon	FALSE	canonical	3	19	junction_2	45	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCCCATTTCATGTA	NA	False	NA	NA	False	NA	NA	NA	175116898	175126431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_175116997_175125090_175125218_175125422
Isoform_111889_7	chr2	-	6539	4	FSM	ENSMUSG00000095545.8	ENSMUST00000179061.8	1458	4	-52	-5029	-52	4295	multi-exon	FALSE	canonical	3	10	junction_1	14.0079342596338	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	175495491	175479720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175485960_175487112_175487174_175487379_175487507_175495379
Isoform_11189_7	chr11	-	3370	14	NIC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	1	-1221	intron_retention	FALSE	canonical	3	120	junction_13	39.3946802043419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	9815	False	NA	-22	True	GATAAA	-16	NA	3321375	3295476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
Isoform_111891_3	chr2	+	7776	3	FSM	ENSMUSG00000078896.12	ENSMUST00000109042.10	1271	3	23	-6528	23	3694	multi-exon	FALSE	canonical	3	12	junction_2	42.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	175311800	175327658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_175311916_175319791_175319919_175320124
Isoform_111892_7	chr2	+	6610	4	FSM	ENSMUSG00000078879.11	ENSMUST00000108985.9	1295	4	1	-5316	1	5316	multi-exon	FALSE	canonical	3	5	junction_3	41.4085337420521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	176362355	176378199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176362453_176370328_176370456_176370661_176370723_176371874
Isoform_111893_4	chr2	+	4439	5	NIC	ENSMUSG00000078878.10	novel	1646	5	NA	NA	-35	2786	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	69.003623093284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176400085	176416392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_176400190_176403673_176403729_176410749_176410877_176411081_176411143_176412300
Isoform_111894_4	chr2	-	1407	5	NNC	ENSMUSG00000078881.11	novel	1458	4	NA	NA	15	280011	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.20861672459	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATTAGATTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	176178551	175885059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_175885096_176166494_176167595_176167799_176167927_176174950_176175006_176178462
Isoform_111896_51	chr2	+	4453	5	FSM	ENSMUSG00000078878.10	ENSMUST00000108981.9	1646	5	-21	-2786	-21	2786	multi-exon	FALSE	canonical	3	21	junction_2	64.6006965906715	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176400099	176416392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300
Isoform_111897_6	chr2	+	4089	5	FSM	ENSMUSG00000078878.10	ENSMUST00000108981.9	1646	5	-45	-2398	-45	2398	multi-exon	FALSE	canonical	3	21	junction_2	64.6006965906715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGATGTGTTTGCGTG	NA	False	NA	NA	False	NA	NA	NA	176400075	176416004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300
Isoform_111898_21	chr2	+	5439	5	Fusion	ENSMUSG00000078878.10_ENSMUSG00000078877.12	novel	2505	4	NA	NA	0	2785	multi-exon	FALSE	canonical	2	17	junction_1	27.1523479647709	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176400120	176505801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_176400218_176493973_176494029_176499154_176499282_176499487_176499549_176500702
Isoform_111899_6	chr2	+	1301	4	FSM	ENSMUSG00000078877.12	ENSMUST00000118012.9	1213	4	-4	-84	-4	84	multi-exon	FALSE	canonical	3	47	junction_2	11.7284080571728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTTCCCATTTCATA	NA	False	NA	NA	False	NA	NA	NA	176490400	176500495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487
Isoform_111901_34	chr2	+	5453	5	NIC	ENSMUSG00000078877.12	novel	2505	4	NA	NA	-4	2785	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	16.6038399173203	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176490400	176505801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487_176499549_176500702
Isoform_111904_4	chr2	+	1433	4	NNC	ENSMUSG00000078876.11	novel	408	4	NA	NA	-100	11936	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAACACCTGTTCTTT	1812	False	NA	NA	False	AATAAA	-30	NA	176522832	176540459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_176522936_176526678_176526806_176526998_176527060_176539317
Isoform_111905_8	chr2	-	1426	4	NNC	ENSMUSG00000095648.8	novel	195	3	NA	NA	-3617	1068	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_2	52.563189485503	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAACAATTCATACAGA	NA	False	NA	NA	False	NA	NA	NA	175895235	175885024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_175886158_175886363_175886491_175891615_175891671_175895124
Isoform_111909_3	chr2	+	4751	5	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	2	2861	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	44.7178655572915	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATTAGACAATA	NA	False	NA	NA	False	NA	NA	NA	176692750	176707441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022
Isoform_111910_4	chr2	-	4826	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3636	2895	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	46.0027173110459	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTAATTTTTTTTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	175895254	175880488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175891615_175891671_175895124
Isoform_111912_3	chr2	+	3572	4	Fusion	ENSMUSG00000078872.10_ENSMUSG00000083317.2	novel	508	4	NA	NA	-8	2228	multi-exon	FALSE	canonical	0	0	junction_1	72.866697163763	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	15	True	NA	NA	NA	176724439	176781368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_176724562_176776035_176776163_176776368_176776430_176778106
Isoform_111913_27	chr2	+	1909	3	ISM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-49	765	-49	-765	5prime_fragment	FALSE	canonical	3	143	junction_2	82	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAAAGTAAGAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	176766063	176778062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_176766152_176776035_176776163_176776368
Isoform_111914_30	chr2	+	3592	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-104	-2540	-104	2227	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	176766008	176781367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
Isoform_111917_43	chr2	+	3653	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-49	-2656	-49	2343	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176766063	176781483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
Isoform_111923_40	chr2	+	393	4	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-49	33916	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	117.565111982916	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTAATTCCTCCCCAA	NA	False	NA	NA	False	NA	NA	NA	176766063	176813056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_176766152_176776035_176776163_176776368_176776430_176812939
Isoform_111924_3	chr2	+	3600	3	NIC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-57	2343	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	148.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176766055	176781483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_176766152_176776035_176776163_176778106
Isoform_111926_6	chr2	+	3667	4	FSM	ENSMUSG00000078872.10	ENSMUST00000134614.8	973	4	-38	-2656	-38	2343	multi-exon	FALSE	canonical	3	47	junction_1	50.9313263129874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176772010	176781483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_176772113_176776035_176776163_176776368_176776430_176778106
Isoform_111928_3	chr2	+	1265	3	ISM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-136	1587	-23	-1587	5prime_fragment	FALSE	canonical	3	64	junction_2	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATACTGTTCCCATTTCA	NA	False	NA	NA	False	NA	NA	NA	177156502	177166409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_177156642_177165078_177165206_177165410
Isoform_111929_7	chr2	+	1166	3	ISM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-121	1671	-8	-1671	5prime_fragment	FALSE	canonical	3	64	junction_2	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTTGAGTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	177156517	177166325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_177156642_177165078_177165206_177165410
Isoform_111932_9	chr2	+	5367	4	FSM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-114	-3684	-1	1758	multi-exon	FALSE	canonical	3	64	junction_2	23.3666428910958	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177156524	177171680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618
Isoform_111933_35	chr2	+	4641	4	FSM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-83	-2989	30	1063	multi-exon	FALSE	canonical	3	64	junction_2	23.3666428910958	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156555	177170985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618
Isoform_111935_5	chr2	+	4241	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-39	2546	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177189968	177204102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
Isoform_111937_6	chr2	+	544	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-41	-1409	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	39.4208066888541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTATTGTTTGCAAGAC	NA	False	NA	NA	False	NA	NA	NA	177189966	177199253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
Isoform_111938_5	chr2	+	1330	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-39	-621	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	39.4208066888541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	177189968	177200041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
Isoform_11194_8	chr11	-	1376	5	ISM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	41	13101	41	895	5prime_fragment	FALSE	canonical	3	97	junction_3	84.1616747694579	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	3359133	3307356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
Isoform_111940_5	chr2	+	1620	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-14	-306	intron_retention	FALSE	canonical	3	153	junction_2	39.4208066888541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	15	True	NA	NA	NA	177189993	177200356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
Isoform_111945_61	chr2	+	4210	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-8	2546	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177189999	177204102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
Isoform_111947_5	chr2	+	2763	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-39	1068	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTCTTGGTCATGATG	NA	False	NA	2	True	NA	NA	NA	177189968	177202624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
Isoform_111951_20	chr2	+	4313	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-8	2547	intron_retention	FALSE	canonical	3	38	junction_3	82.9216497665115	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	15	True	NA	NA	NA	177189999	177204103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246
Isoform_111956_25	chr2	+	4155	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-108	-2838	-8	2546	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177189999	177204102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
Isoform_111958_8	chr2	+	4088	3	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-2	2546	intron_retention	FALSE	canonical	3	19	junction_2	51.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190005	177204102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_177190111_177198701_177198829_177200246
Isoform_11196_4	chr11	-	313	2	FSM	ENSMUSG00000020451.18	ENSMUST00000145223.2	400	2	68	19	53	-19	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGGCCTGAAAGGTA	NA	False	NA	NA	False	AATAAA	-10	NA	3359121	3346797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3347035_3359045
Isoform_111960_6	chr2	+	1292	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-3	-583	multi-exon	FALSE	canonical	3	49	junction_2	20.8326666559997	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	177190004	177411172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168
Isoform_111961_21	chr2	+	455	5	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	12	-255	multi-exon	FALSE	canonical	3	49	junction_2	85.9200209497181	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACCAATGTGGTAAGGA	NA	False	NA	NA	False	NA	NA	NA	177190019	177411500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168_177410230_177411379
Isoform_111964_5	chr2	+	1576	5	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-41	-439	multi-exon	FALSE	canonical	3	56	junction_3	16.4525833837729	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGACTCATCAGTATA	NA	False	NA	NA	False	NA	NA	NA	177189966	177411316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168
Isoform_111965_6	chr2	+	1434	5	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-43	-583	multi-exon	FALSE	canonical	3	56	junction_3	16.4525833837729	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	177189964	177411172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168
Isoform_111968_5	chr2	+	4575	6	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	14	3255	multi-exon	FALSE	canonical	3	56	junction_3	79.4742725666615	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTTAGGGCCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	177190021	177415520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
Isoform_111969_21	chr2	+	4174	6	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-39	2801	multi-exon	FALSE	canonical	3	56	junction_3	79.4742725666615	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177189968	177415066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
Isoform_111970_42	chr2	+	4122	6	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	14	2802	multi-exon	FALSE	canonical	3	56	junction_3	79.4742725666615	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	177190021	177415067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
Isoform_111971_6	chr2	+	4245	6	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	8	2919	multi-exon	FALSE	canonical	3	56	junction_3	79.4742725666615	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGGGTCAGACAGAA	NA	False	NA	NA	False	AATAAA	-22	NA	177190015	177415184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
Isoform_111973_6	chr2	+	1230	3	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	2	-585	multi-exon	FALSE	canonical	3	66	junction_1	15.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTACTGTTCCCATTTCA	NA	False	NA	NA	False	NA	NA	NA	177190009	177411170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177409836_177409964_177410168
Isoform_111975_10	chr2	+	440	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	-39	-266	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	177189968	177411489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
Isoform_111976_16	chr2	+	3971	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	8	2802	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	177190015	177415067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
Isoform_111980_4	chr2	+	1481	5	ISM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-25	438	-25	-438	5prime_fragment	FALSE	canonical	3	97	junction_4	94.7137133682341	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCATCAGTATAA	NA	False	NA	NA	False	NA	NA	NA	177401055	177411317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168
Isoform_111983_39	chr2	+	4049	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	6	-3311	6	2801	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177401086	177415066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
Isoform_111984_18	chr2	+	4084	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-29	-3311	-29	2801	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177401051	177415066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
Isoform_111987_5	chr2	+	4175	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-1	-3430	-1	2920	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAGGGTCAGACAGAAA	NA	False	NA	NA	False	AATAAA	-23	NA	177401079	177415185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
Isoform_111989_11	chr2	+	4030	5	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-12	2801	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	122.051218756717	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177401068	177415066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168_177410230_177411379
Isoform_111990_6	chr2	+	1194	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000074521.10	novel	192	2	NA	NA	-2	-244	multi-exon	FALSE	canonical	3	23	junction_2	151.098937418133	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGAGTTCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	177401078	177547333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_177401169_177404638_177404694_177546077_177546205_177546411
Isoform_111993_10	chr2	+	4157	7	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	0	2801	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	121.969941652305	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177401080	177415066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409531_177409569_177409836_177409964_177410168_177410230_177411379
Isoform_111994_4	chr2	+	611	7	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	8	-266	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	130.74784893068	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	177401088	177411489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_177401169_177404638_177404694_177405627_177405769_177409531_177409569_177409836_177409964_177410168_177410230_177411379
Isoform_111997_4	chr2	+	1234	3	FSM	ENSMUSG00000074521.10	ENSMUST00000108935.8	1451	3	57	160	57	-160	multi-exon	FALSE	canonical	3	28	junction_2	14.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACTGTTCTCATTTCAT	NA	False	NA	NA	False	NA	NA	NA	177538945	177547417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_177539047_177546077_177546205_177546411
Isoform_111998_5	chr2	+	619	3	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	14	34624	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGTTGTTTGAAATAT	NA	False	NA	NA	False	TTTAAA	-9	NA	177538902	177582201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_177539047_177568633_177568718_177581810
Isoform_111999_56	chr2	+	6307	4	FSM	ENSMUSG00000074519.12	ENSMUST00000108926.3	1413	4	-139	-4755	-44	4755	multi-exon	FALSE	canonical	2	14	junction_3	11.2644968324772	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177665032	177680570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_177665175_177673047_177673175_177673382_177673444_177674593
Isoform_11200_297	chr11	-	2744	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	43	0	14	0	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6858	False	NA	-5	True	ATTAAA	-14	NA	3402320	3365981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
Isoform_112001_4	chr2	+	2299	13	FSM	ENSMUSG00000027525.19	ENSMUST00000108916.8	2656	13	-69	426	-69	-7	multi-exon	FALSE	canonical	0	0	junction_1	1.70579079087156	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAATAAAGGCTTTCAC	1629	False	NA	NA	False	ATTAAA	-18	NA	177760902	177977858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_177761096_177897905_177898068_177901970_177902049_177911109_177911293_177920689_177920900_177924802_177924978_177925652_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
Isoform_112002_4	chr2	+	2273	4	FSM	ENSMUSG00000070476.11	ENSMUST00000094251.11	4541	4	-4	2272	-4	1866	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	178056312	178063949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_178056502_178058424_178058537_178059298_178059385_178062063
Isoform_112004_16	chr2	+	720	3	FSM	ENSMUSG00000039138.2	ENSMUST00000041998.2	737	3	18	-1	18	1	multi-exon	FALSE	canonical	3	53	junction_2	6	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGGTAATGACCCTT	NA	False	NA	8	True	AATAAA	-23	NA	179056746	179058676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179056894_179057552_179057714_179058264
Isoform_112007_13	chr2	+	2121	3	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	22	2467	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	26.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGTCTTAGCTGCATT	NA	False	NA	10	True	NA	NA	NA	179056750	179061142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179056894_179057552_179057714_179059325
Isoform_112008_6	chr2	+	1392	6	FSM	ENSMUSG00000000305.13	ENSMUST00000108911.2	1208	6	-187	3	4	-3	multi-exon	FALSE	canonical	3	23	junction_4	4.89897948556636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTTGGCTTGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	179084227	179489494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179084472_179086492_179086605_179422046_179422274_179439250_179439422_179484761_179484918_179489012
Isoform_112013_20	chr2	+	6381	16	FSM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	6	1	6	-1	multi-exon	FALSE	canonical	3	15	junction_13	5.18802038889166	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTCTCCCGACTTGCT	NA	False	NA	3	True	AATAAA	-15	NA	179084229	179541165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179084472_179086492_179086605_179422046_179422274_179439250_179439422_179484761_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
Isoform_112015_3	chr2	+	6428	16	FSM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	-40	0	-40	0	multi-exon	FALSE	canonical	3	15	junction_13	5.18802038889166	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTCTCCCGACTTGCTT	NA	False	NA	4	True	AATAAA	-16	NA	179084183	179541166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179084472_179086492_179086605_179422046_179422274_179439250_179439422_179484761_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
Isoform_112017_130	chr2	+	2666	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	16.1176232049821	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGCCTCTGTCCGTCA	NA	False	NA	14	True	AATAAA	-15	NA	179666763	179677253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_112018_62	chr2	+	2702	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-52	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	16.1176232049821	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGCCTCTGTCCGTCA	NA	False	NA	14	True	AATAAA	-15	NA	179666727	179677253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_112020_5	chr2	+	1923	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-76	-804	combination_of_known_junctions	TRUE	canonical	3	24	junction_3	16.1176232049821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTGTCCAAATGTGT	NA	False	NA	NA	False	NA	NA	NA	179666703	179676450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_112023_64	chr2	+	2563	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	-30	1	-30	-1	multi-exon	FALSE	canonical	3	38	junction_3	10.2705586508232	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGCCTCTGTCCGTCA	NA	False	NA	14	True	AATAAA	-15	NA	179666749	179677253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_112024_153	chr2	+	2543	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	-5	-4	-5	0	multi-exon	FALSE	canonical	3	38	junction_3	10.2705586508232	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTCCGTCACCTGT	NA	False	NA	19	True	AATAAA	-20	NA	179666774	179677258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_112029_12	chr2	+	2296	7	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	21.8993911635309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGCCTCTGTCCGTCA	NA	False	NA	14	True	AATAAA	-15	NA	179666770	179677253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_112034_30	chr2	+	4324	11	FSM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	19	0	19	0	multi-exon	FALSE	canonical	3	19	junction_4	6.29603049547888	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTTCTGTTTATTGAG	NA	False	NA	18	True	ATTAAA	-19	NA	179684320	179711994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
Isoform_112035_11	chr2	+	1194	2	ISM	ENSMUSG00000039069.20	ENSMUST00000142608.8	2339	5	8	7636	8	-7636	5prime_fragment	FALSE	canonical	3	114	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179712392	179714764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_179712409_179713586
Isoform_112036_8	chr2	+	1359	6	ISM	ENSMUSG00000039069.20	ENSMUST00000147264.8	2224	10	6	3004	2	1	5prime_fragment	FALSE	canonical	3	103	junction_3	49.2203210066737	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	179712386	179724684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878
Isoform_112037_98	chr2	+	1671	11	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	61	junction_10	48.6041150521229	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172_179727591_179727611
Isoform_112039_15	chr2	+	1721	10	FSM	ENSMUSG00000039069.20	ENSMUST00000184862.8	1730	10	3	6	3	1	multi-exon	FALSE	canonical	3	26	junction_8	58.7703208880465	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712387	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
Isoform_112040_15	chr2	+	1553	9	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	58.60873974929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
Isoform_112042_28	chr2	+	1577	10	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	49	junction_2	59.18353958682	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172_179727591_179727611
Isoform_112043_4	chr2	+	1437	9	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	23	junction_7	75.0699673637867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712387	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179727172_179727591_179727611
Isoform_112044_4	chr2	+	1612	10	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	26	junction_7	70.4856171301793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712381	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172_179727591_179727611
Isoform_112045_5	chr2	+	1131	4	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	81.9972899281162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	179712381	179724684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878
Isoform_112046_4	chr2	+	1233	6	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-2	-1187	intron_retention	FALSE	canonical	3	30	junction_2	71.303295856503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACAATTTTAATGAGTC	NA	False	NA	NA	False	NA	NA	NA	179712382	179726501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856
Isoform_112048_23	chr2	+	1459	8	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	60.3080527333605	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
Isoform_112049_8	chr2	+	1477	9	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	26	junction_6	73.5364492955704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712377	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172_179727591_179727611
Isoform_11205_33	chr11	-	2727	6	NIC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	55.8161267018771	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTGGAGCTTGTGT	6857	False	NA	-4	True	ATTAAA	-15	NA	3402321	3365980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3382399_3382621_3402208
Isoform_112053_5	chr2	+	1495	8	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-644	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	61	junction_7	51.0314028969678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATGTGTCTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	179719768	179727694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172_179727591_179727611
Isoform_112056_373	chr2	+	2791	14	FSM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	15	-1	-14	1	multi-exon	TRUE	canonical	3	166	junction_6	20.3809866146027	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTGAAGGTTTGAT	NA	False	NA	11	True	ATTAAA	-17	NA	179761113	179804474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
Isoform_112062_39	chr2	+	2768	14	NNC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	46.788963448571	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGGTTGAAGGTTTGA	NA	False	NA	10	True	ATTAAA	-16	NA	179761108	179804473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179761263_179778771_179778906_179780032_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
Isoform_112069_1635	chr2	+	1423	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	111	1	1	1	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813388	179818078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
Isoform_112071_261	chr2	+	1518	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	15	2	15	0	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813292	179818077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
Isoform_112072_22	chr2	+	1509	9	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	1931	junction_6	165.514349831064	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813398	179818076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817750_179817866
Isoform_112083_2677	chr2	+	356	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	36	2	-5	1	multi-exon	FALSE	canonical	3	3954	junction_5	1417.02976680097	2677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGCTTTTGCTGTTTTT	NA	False	NA	24	True	AATAAA	-25	NA	179899205	179900236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
Isoform_11209_4	chr11	-	1850	8	ISM	ENSMUSG00000034570.13	ENSMUST00000110018.8	2384	14	3857	3	1220	-3	3prime_fragment	FALSE	canonical	1	2	junction_6	1.45686271816937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCTTGGCTCCTTCCTG	2030	False	NA	NA	False	ATTAAA	-11	NA	3450914	3444384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_3445167_3445346_3445452_3445559_3445638_3445784_3445923_3449596_3449781_3449890_3450001_3450137_3450250_3450573
Isoform_112090_90	chr2	+	500	5	NIC	ENSMUSG00000039001.13	novel	394	6	NA	NA	24	1	intron_retention	FALSE	canonical	3	3954	junction_4	1482.42763314099	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGCTTTTGCTGTTTTT	NA	False	NA	24	True	AATAAA	-25	NA	179899234	179900236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
Isoform_112096_139	chr2	+	2902	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038259.13	3010	12	91	17	2	-2	multi-exon	FALSE	canonical	3	51	junction_3	7.21568539381252	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180098128	180116643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
Isoform_112097_31	chr2	+	2954	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038259.13	3010	12	39	17	39	-2	multi-exon	FALSE	canonical	3	51	junction_3	7.21568539381252	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180098076	180116643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
Isoform_112098_19	chr2	+	2769	13	NNC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	16.583123951777	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180098126	180116643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114473_180114607_180114627_180114895_180114961_180115306_180115456_180115896
Isoform_112099_5	chr2	+	2868	13	NNC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	16.583123951777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGATCCTTGTGTGA	NA	False	NA	4	True	AATATA	-13	NA	180098023	180116639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114473_180114607_180114627_180114895_180114961_180115306_180115456_180115896
Isoform_11210_11	chr11	-	3354	13	FSM	ENSMUSG00000034570.13	ENSMUST00000044507.12	3370	13	8	8	8	-1	multi-exon	TRUE	canonical	1	2	junction_6	1.60511335702152	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGGCTCCTTCCTGAC	NA	False	NA	NA	False	ATTAAA	-13	NA	3454813	3444382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3445167_3445346_3445452_3445559_3445638_3445784_3445923_3449596_3449781_3449890_3450001_3450137_3450250_3450573_3450750_3451045_3451163_3451319_3451429_3451524_3451639_3451986_3453144_3454643
Isoform_112100_6	chr2	+	4272	11	NIC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	55	junction_10	6.52763356814704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180098128	180116643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180098167_180105733_180106622_180107389_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
Isoform_112102_5	chr2	+	1597	5	NIC	ENSMUSG00000027569.16	novel	1510	5	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	27.8836869871974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTATCT	NA	False	NA	NA	False	ATTAAA	-7	NA	180224524	180228084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180224749_180225193_180225316_180226198_180226281_180226486_180226665_180227093
Isoform_112104_36	chr2	+	1494	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	20	-4	0	4	multi-exon	FALSE	canonical	3	47	junction_3	10.4253297309965	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTATCT	NA	False	NA	NA	False	ATTAAA	-7	NA	180224524	180228084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
Isoform_112105_13	chr2	+	1802	4	FSM	ENSMUSG00000027569.16	ENSMUST00000150757.8	1825	4	9	14	0	3	multi-exon	TRUE	canonical	3	65	junction_2	3.55902608401044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCTATC	NA	False	NA	NA	False	ATTAAA	-6	NA	180224524	180228083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180224749_180225193_180225316_180226198_180226665_180227093
Isoform_112107_245	chr2	+	2247	7	FSM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	197	5	-20	-5	multi-exon	FALSE	canonical	3	62	junction_6	11.4370256428652	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	17	True	AATAAA	-17	NA	180231234	180237624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
Isoform_112110_33	chr2	+	2193	9	NNC	ENSMUSG00000049401.11	novel	2449	7	NA	NA	-20	-5	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_7	18.4306131205666	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	17	True	AATAAA	-17	NA	180231234	180237624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000_180236947_180236973_180237082_180237108
Isoform_112111_3	chr2	+	2356	8	NNC	ENSMUSG00000049401.11	novel	2449	7	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.4921847086385	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTGTGGCCGTGTT	NA	False	NA	15	True	AATAAA	-15	NA	180231240	180237622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234460_180234578_180234896_180234964_180235362_180235512_180236000
Isoform_112112_3	chr2	+	2438	32	FSM	ENSMUSG00000027570.16	ENSMUST00000103059.2	2846	32	23	385	23	198	multi-exon	TRUE	canonical	0	0	junction_1	6.14327716438208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAGTACTGGTTATAGT	4894	False	NA	NA	False	AATAAA	-19	NA	180240037	180263593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180240119_180240658_180240728_180241837_180241874_180242314_180242387_180243374_180243429_180244434_180244471_180244894_180244919_180245149_180245204_180245541_180245596_180245926_180245969_180247010_180247068_180247519_180247574_180248267_180248322_180248600_180248655_180248875_180248930_180249419_180249474_180250224_180250279_180251118_180251173_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180254783_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
Isoform_112113_9	chr2	+	2140	22	ISM	ENSMUSG00000027570.16	ENSMUST00000103059.2	2846	32	6773	384	1810	199	3prime_fragment	FALSE	canonical	2	8	junction_11	3.68363421063118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGTACTGGTTATAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	180246787	180263594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_180247068_180247519_180247574_180248267_180248322_180248600_180248655_180248875_180248930_180249419_180249474_180250224_180250279_180251118_180251173_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180254783_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
Isoform_112114_5	chr2	+	4400	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	121	-2866	121	2866	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCTGAAAGCTCTTT	NA	False	NA	22	True	AGTAAA	-23	NA	180352030	180363392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_112115_53	chr2	+	1490	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	160	5	160	-2	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACAATGGCTTCTAAAAA	NA	False	NA	13	True	AATAAA	-24	NA	180352069	180360521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_112116_51	chr2	+	1603	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	44	8	44	-5	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCACAATGGCTTCTAA	NA	False	NA	10	True	AATAAA	-21	NA	180351953	180360518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_112118_68	chr2	+	1400	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	41	214	41	-211	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTGGATCGGTTTTTTG	NA	False	NA	51	True	TATAAA	-42	NA	180351950	180360312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_112119_16	chr2	+	1420	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	-2	237	-2	-234	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACTTTTGTGTGGGT	NA	False	NA	28	True	TATAAA	-19	NA	180351907	180360289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_112120_9	chr2	+	1673	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	-25	7	-25	-4	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCACAATGGCTTCTAAA	NA	False	NA	11	True	AATAAA	-22	NA	180351884	180360519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_112122_4	chr2	+	2670	2	ISM	ENSMUSG00000023393.16	ENSMUST00000151882.8	1158	5	-33	-18	-33	18	intron_retention	FALSE	canonical	3	234	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAAAGAGACA	NA	False	NA	NA	False	NA	NA	NA	180367138	180376236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_180367245_180373672
Isoform_112125_48	chr2	+	2116	13	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-33	-6	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	51.5985437994351	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367138	180384067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_112127_9	chr2	+	2026	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-43	-6	combination_of_known_splicesites	FALSE	canonical	3	39	junction_2	65.9963685452239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367128	180384067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_112129_188	chr2	+	2242	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	27	6	27	-6	multi-exon	TRUE	canonical	3	124	junction_2	30.6879455161143	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367082	180384067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_112130_5	chr2	+	2154	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-36	-6	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	63.6142818831128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367135	180384067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_112131_6	chr2	+	2135	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	50	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	63.3091587906273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367105	180384071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_112133_5	chr2	+	2126	11	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	26	0	combination_of_known_splicesites	TRUE	canonical	3	19	junction_7	65.8692644561938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367081	180384073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_112134_7	chr2	+	2146	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	27	-2	combination_of_known_splicesites	TRUE	canonical	3	57	junction_3	52.1550453966879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367082	180384071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_112135_9	chr2	+	2076	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-23	-6	combination_of_known_splicesites	FALSE	canonical	3	57	junction_3	52.1550453966879	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367148	180384067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_112136_12	chr2	+	2571	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	57	-2	intron_retention	FALSE	canonical	3	182	junction_6	18.7713514794124	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367112	180384071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_112139_3	chr2	+	1564	7	FSM	ENSMUSG00000038840.8	ENSMUST00000108875.2	1178	7	-388	2	-388	1	multi-exon	FALSE	canonical	3	9	junction_2	4.30761599444003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTCAGCTAGGCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	180570427	180575801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180571307_180572597_180572698_180573051_180573131_180573211_180573258_180574711_180574784_180574929_180575129_180575612
Isoform_11214_13	chr11	-	3369	22	FSM	ENSMUSG00000020439.18	ENSMUST00000170588.8	3386	22	16	1	16	-1	multi-exon	FALSE	canonical	2	9	junction_21	27.3941583060523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGACTTTTCTCTGCT	8153	False	NA	-7	True	GATAAA	-16	NA	3489276	3467523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487554_3487606_3489111
Isoform_112140_7	chr2	+	1962	6	FSM	ENSMUSG00000038840.8	ENSMUST00000137859.2	1529	6	-431	-2	-431	-1	multi-exon	FALSE	canonical	3	12	junction_1	3.81575680566778	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCAGCTAGGCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	180570384	180575802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180571307_180572597_180573131_180573211_180573258_180574711_180574784_180574929_180575129_180575612
Isoform_112142_61	chr2	+	2684	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	65.799947842644	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGGTTTGTGTGTC	4065	False	NA	-42	True	NA	NA	NA	180609057	180624252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
Isoform_112143_14	chr2	+	2563	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	65.799947842644	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTATCAGTGGTTGGTG	4039	False	NA	21	True	NA	NA	NA	180609031	180624105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
Isoform_11215_44	chr11	-	3444	22	NIC	ENSMUSG00000020439.18	novel	3386	22	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_20	24.580101828424	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGACTTTTCTCTGCT	8135	False	NA	-7	True	GATAAA	-16	NA	3489294	3467523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
Isoform_112151_221	chr2	+	2622	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	22	70	-9	-2	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTCTGTGGTTTGTGT	4056	False	NA	-45	True	NA	NA	NA	180609048	180624249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
Isoform_112155_51	chr2	+	2698	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	13	3	2	-3	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCCAGTGCTTGCTT	4047	False	NA	22	True	NA	NA	NA	180609039	180624316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
Isoform_11216_49	chr11	-	3401	22	NIC	ENSMUSG00000020439.18	novel	3348	22	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_20	24.580101828424	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGACTTTTCTCTGCT	8178	False	NA	-7	True	GATAAA	-16	NA	3489251	3467523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
Isoform_112162_12	chr2	+	2572	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_11	68.6480557303377	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGGTTTGTGTGTC	4049	False	NA	-42	True	NA	NA	NA	180609041	180624252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622190_180622268_180622829
Isoform_112174_90	chr2	+	820	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	75	265	-14	2	multi-exon	FALSE	canonical	3	201	junction_1	270.955139275859	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3411	False	NA	3	True	AATAAA	-19	NA	180829114	180830299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
Isoform_112175_45	chr2	+	860	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	35	265	-14	2	multi-exon	TRUE	canonical	3	201	junction_1	270.955139275859	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3371	False	NA	3	True	AATAAA	-19	NA	180829074	180830299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
Isoform_112179_12	chr2	+	922	4	FSM	ENSMUSG00000016344.15	ENSMUST00000127971.8	1153	4	-6	237	-6	0	multi-exon	FALSE	canonical	3	201	junction_1	312.789954371229	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3379	False	NA	1	True	AATAAA	-17	NA	180829082	180830297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180829248_180829342_180829680_180829796_180829894_180829974
Isoform_11218_171	chr11	-	3317	21	FSM	ENSMUSG00000020439.18	ENSMUST00000020721.15	3335	21	19	-1	19	1	multi-exon	FALSE	canonical	3	70	junction_20	9.90908673894825	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8156	False	NA	-5	True	GATAAA	-18	NA	3489273	3467521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
Isoform_112180_72	chr2	+	701	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	-10	-2	-10	2	multi-exon	FALSE	canonical	3	258	junction_1	248.035279748668	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3415	False	NA	3	True	AATAAA	-19	NA	180829118	180830299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
Isoform_112181_52	chr2	+	726	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	-39	2	1	-2	multi-exon	TRUE	canonical	3	258	junction_1	248.035279748668	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCCTGGTATGTTTGAA	3386	False	NA	-1	True	AATAAA	-15	NA	180829089	180830295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
Isoform_112184_66	chr2	+	775	4	FSM	ENSMUSG00000016344.15	ENSMUST00000146089.8	750	4	-25	0	-14	0	multi-exon	FALSE	canonical	3	258	junction_1	285.921123544395	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3411	False	NA	1	True	AATAAA	-17	NA	180829114	180830297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974
Isoform_112185_10	chr2	+	2757	4	FSM	ENSMUSG00000016344.15	ENSMUST00000146089.8	750	4	-44	-1963	7	1696	multi-exon	FALSE	canonical	3	258	junction_1	285.921123544395	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATTTAGCTCTC	3392	False	NA	NA	False	NA	NA	NA	180829095	180832260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974
Isoform_112188_23	chr2	+	940	4	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	1	2	intron_retention	FALSE	canonical	3	629	junction_1	111.05254011803	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3386	False	NA	3	True	AATAAA	-19	NA	180829089	180830299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180829530_180829601_180829680_180829796_180829894_180829974
Isoform_112190_10	chr2	+	609	3	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	15	3	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	409.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTATGTTTGAAACATT	3640	False	NA	4	True	AATAAA	-20	NA	180829343	180830300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180829530_180829796_180829894_180829974
Isoform_112196_88	chr2	+	4430	34	FSM	ENSMUSG00000038685.19	ENSMUST00000054622.15	4401	34	-29	0	-6	0	multi-exon	FALSE	canonical	3	57	junction_31	50.0269348938753	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961525	180998409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
Isoform_112198_7	chr2	+	4344	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_31	58.0188267380112	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961531	180998407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950
Isoform_11220_14	chr11	-	3151	20	FSM	ENSMUSG00000020439.18	ENSMUST00000075118.10	3117	20	-35	1	18	-1	multi-exon	FALSE	canonical	3	4	junction_1	23.2906482011302	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGACTTTTCTCTGCT	8155	False	NA	-7	True	GATAAA	-16	NA	3489274	3467523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
Isoform_112200_19	chr2	+	4254	36	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_31	64.100711575534	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961522	180998407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
Isoform_112202_133	chr2	+	4396	34	FSM	ENSMUSG00000038685.19	ENSMUST00000108814.8	4322	34	-36	-38	-4	0	multi-exon	FALSE	canonical	3	117	junction_31	42.9439380842258	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961541	180998409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
Isoform_112203_8	chr2	+	4337	35	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-10	0	intron_retention	FALSE	canonical	3	86	junction_34	52.4017370086383	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961521	180998408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950
Isoform_112206_45	chr2	+	4242	36	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_34	59.3590527456187	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961518	180998409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
Isoform_112208_57	chr2	+	4311	33	FSM	ENSMUSG00000038685.19	ENSMUST00000098971.11	4307	33	-4	0	-4	0	multi-exon	TRUE	canonical	3	28	junction_30	51.0130095998805	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961527	180998409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
Isoform_112210_8	chr2	+	4094	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_30	65.5566595056241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961565	180998407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
Isoform_112211_108	chr2	+	4304	33	FSM	ENSMUSG00000038685.19	ENSMUST00000108815.8	4243	33	-61	0	-15	0	multi-exon	FALSE	canonical	3	92	junction_30	41.94582396899	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961516	180998409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
Isoform_112213_39	chr2	+	4105	35	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_33	59.5404619481285	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961538	180998409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
Isoform_112219_106	chr2	+	2074	6	FSM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	1	-3	1	3	multi-exon	FALSE	canonical	3	135	junction_3	10.1074230147946	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCTCAGTGGAGACTCA	NA	False	NA	8	True	ATTAAA	-15	NA	181007198	181022578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
Isoform_112221_32	chr2	+	3680	11	FSM	ENSMUSG00000027582.17	ENSMUST00000116366.9	3666	11	-17	3	1	-1	multi-exon	FALSE	canonical	3	28	junction_6	46.2520269826091	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTTGGCTCTTGGTTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	181007198	181025418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
Isoform_112223_3	chr2	+	3754	10	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	28	junction_6	45.2714719535328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007198	181025421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024497_181024591_181024954_181025050
Isoform_112225_21	chr2	+	4391	10	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	44	1	intron_retention	FALSE	canonical	3	53	junction_7	40.6748625620843	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGGCTCTTGGTTGCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	181007288	181025420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
Isoform_112228_6	chr2	+	4654	9	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	53	junction_6	38.0944549770698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007198	181025421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024338_181024408_181024497_181024591_181024954_181025050
Isoform_11223_5	chr11	-	6229	20	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	-10	0	intron_retention	FALSE	canonical	3	70	junction_19	10.1643012249038	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8167	False	NA	-6	True	GATAAA	-17	NA	3489262	3467522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
Isoform_112230_4	chr2	+	4720	8	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	81	junction_6	30.513295864095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007198	181025416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024497_181024591_181024954_181025050
Isoform_112231_8	chr2	+	2023	6	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	59.0410027015124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCTCAGTGGAGACTCA	NA	False	NA	8	True	ATTAAA	-15	NA	181007221	181022578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022195
Isoform_112232_4	chr2	+	5037	6	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	53	junction_5	39.8075369747991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGTTGGCTCTTGGTTG	NA	False	NA	NA	False	ATTAAA	-11	NA	181007198	181025417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181024338_181024408
Isoform_112233_13	chr2	+	1020	9	FSM	ENSMUSG00000000827.19	ENSMUST00000108799.10	985	9	-37	2	-5	-2	multi-exon	FALSE	canonical	3	48	junction_5	401.298965080898	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACTGTGCCATCCTTTC	NA	False	NA	34	True	CATAAA	-31	NA	181138986	181157178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181152296_181152324_181153366_181153409_181154831_181154881_181156872
Isoform_112237_106	chr2	+	2356	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	38	1209	4	501	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATTTGTTTGGTCTGT	NA	False	NA	10	True	AATAAA	-24	NA	181138995	181158550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_112238_314	chr2	+	980	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	42	2581	8	-2	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACTGTGCCATCCTTTC	NA	False	NA	34	True	CATAAA	-31	NA	181138999	181157178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_112239_213	chr2	+	1502	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	38	2063	4	-353	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTAGAATTTTATTC	NA	False	NA	29	True	AATAAA	-25	NA	181138995	181157696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_112244_59	chr2	+	2310	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	26	614	8	501	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATTTGTTTGGTCTGT	NA	False	NA	10	True	AATAAA	-24	NA	181138999	181158550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
Isoform_112245_98	chr2	+	953	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	13	1984	-5	0	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGCCATCCTTTCAA	NA	False	NA	36	True	CATAAA	-33	NA	181138986	181157180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
Isoform_112246_87	chr2	+	1478	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	2	1470	0	-355	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAATGTAGAATTTTAT	NA	False	NA	27	True	AATAAA	-23	NA	181138975	181157694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
Isoform_112251_47	chr2	+	922	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	8	869	8	0	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGCCATCCTTTCAA	NA	False	NA	36	True	CATAAA	-33	NA	181138999	181157180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_112252_42	chr2	+	1459	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	-11	351	1	-351	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAGAATTTTATTCTG	NA	False	NA	31	True	AATAAA	-27	NA	181138980	181157698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_112253_20	chr2	+	2312	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	-11	-502	1	502	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATTTGTTTGGTCTGTC	NA	False	NA	11	True	AATAAA	-25	NA	181138980	181158551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_112254_16	chr2	+	2270	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	0	1205	0	501	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATTTGTTTGGTCTGT	NA	False	NA	10	True	AATAAA	-24	NA	181138979	181158550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
Isoform_112255_33	chr2	+	1420	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	-4	2059	0	-353	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTAGAATTTTATTC	NA	False	NA	29	True	AATAAA	-25	NA	181138975	181157696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
Isoform_112263_22	chr2	+	4351	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	37	632	intron_retention	FALSE	canonical	3	55	junction_1	77.7924589318699	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	7108	False	NA	11	True	AATAAA	-12	NA	181162380	181194674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
Isoform_112264_11	chr2	+	4412	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	1	632	intron_retention	FALSE	canonical	3	55	junction_1	77.7924589318699	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	7047	False	NA	11	True	AATAAA	-12	NA	181162319	181194674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
Isoform_112266_7	chr2	+	4254	8	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-12	632	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	79.3236717377555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	7059	False	NA	11	True	AATAAA	-12	NA	181162331	181194674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
Isoform_112269_16	chr2	+	4275	6	FSM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	37	-648	37	631	multi-exon	FALSE	canonical	3	55	junction_1	79.8884221899519	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGCTGTGGTTTCTTG	7108	False	NA	10	True	AATAAA	-11	NA	181162380	181194673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_112272_10	chr2	+	4369	6	FSM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	-57	-648	9	631	multi-exon	FALSE	canonical	3	55	junction_1	79.8884221899519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGCTGTGGTTTCTTG	7014	False	NA	10	True	AATAAA	-11	NA	181162286	181194673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_112276_73	chr2	+	4328	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	32	-632	7	632	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	7078	False	NA	11	True	AATAAA	-12	NA	181162350	181194674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
Isoform_112277_14	chr2	+	4426	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	-66	-632	-25	632	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	6980	False	NA	11	True	AATAAA	-12	NA	181162252	181194674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
Isoform_112283_14	chr2	+	4182	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	7	632	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	78.8044344493943	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	7078	False	NA	11	True	AATAAA	-12	NA	181162350	181194674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
Isoform_112285_160	chr2	+	4252	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	73	2253	7	631	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGCTGTGGTTTCTTG	7078	False	NA	10	True	AATAAA	-11	NA	181162350	181194673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_112290_27	chr2	+	4306	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	20	2252	20	632	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	7025	False	NA	11	True	AATAAA	-12	NA	181162297	181194674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_112296_1491	chr2	+	2988	21	FSM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	67	-1	13	1	multi-exon	FALSE	canonical	3	340	junction_3	47.7921280128851	1491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGGCTTGGGCCTCAC	2561	False	NA	29	True	ATTAAA	-17	NA	181243178	181297454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
Isoform_11230_11	chr11	-	6598	3	FSM	ENSMUSG00000056579.19	ENSMUST00000153313.9	5112	3	-1486	0	26	0	multi-exon	FALSE	canonical	3	2126	junction_1	263	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTTGGGTTTCTATT	NA	False	NA	NA	False	NA	NA	NA	3599016	3589793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3593180_3594771_3595524_3596556
Isoform_112316_22	chr2	+	1171	10	FSM	ENSMUSG00000059540.16	ENSMUST00000103042.10	1183	10	8	4	8	-4	multi-exon	FALSE	canonical	3	30	junction_1	6.17841723309237	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCAGCTGGGTCCTGTCC	2300	False	NA	18	True	ATTAAA	-32	NA	181322110	181329860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
Isoform_112317_3	chr2	+	1529	9	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	-9	-5	intron_retention	FALSE	canonical	3	30	junction_1	5.86834729715275	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACACAGGCTTCAGCTG	2283	False	NA	8	True	ATTAAA	-22	NA	181322093	181329850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328546_181328620_181328768_181329406_181329479_181329669
Isoform_112318_4	chr2	+	4269	8	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	37	junction_3	4.88228785446716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGGCTTCAGCTGGGT	2283	False	NA	11	True	ATTAAA	-25	NA	181322093	181329853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328546_181328620_181328768_181329406_181329479_181329669
Isoform_112321_111	chr2	+	3514	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	46	9	-13	6	multi-exon	FALSE	canonical	3	52	junction_6	11.3431330181157	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTATTGCTTCTGTG	NA	False	NA	17	True	AATAAA	-20	NA	181479692	181499245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
Isoform_112325_13	chr2	+	2259	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	23	666	0	-666	multi-exon	FALSE	canonical	3	712	junction_2	38.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTAGAGTTTTGATTT	8919	False	NA	NA	False	NA	NA	NA	181506152	181511957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_112326_78	chr2	+	2192	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	90	666	67	-666	multi-exon	FALSE	canonical	3	712	junction_2	38.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTAGAGTTTTGATTT	8986	False	NA	NA	False	NA	NA	NA	181506219	181511957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_112327_239	chr2	+	638	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	89	2221	66	-2221	multi-exon	FALSE	canonical	3	712	junction_2	38.5	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGGTTTTCTCTGTGTA	8985	False	NA	16	True	AATAAA	-27	NA	181506218	181510402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_112328_116	chr2	+	1673	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	94	1181	71	-1181	multi-exon	FALSE	canonical	3	712	junction_2	38.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCCTCAGTTCTT	8990	False	NA	3	True	ATTAAA	-16	NA	181506223	181511442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_112329_53	chr2	+	669	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	58	2221	35	-2221	multi-exon	FALSE	canonical	3	712	junction_2	38.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGGTTTTCTCTGTGTA	8954	False	NA	16	True	AATAAA	-27	NA	181506187	181510402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_11233_16	chr11	-	3097	2	FSM	ENSMUSG00000048807.3	ENSMUST00000051207.2	3059	2	-37	-1	-37	0	multi-exon	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGTCATTCCTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	3864701	3857020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3857985_3862568
Isoform_112334_15	chr2	+	1713	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	53	1182	30	-1182	multi-exon	FALSE	canonical	3	712	junction_2	38.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTCTGGCCTCAGTTCT	8949	False	NA	2	True	ATTAAA	-15	NA	181506182	181511441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_112341_19	chr2	+	356	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	-2646	at_least_one_novel_splicesite	FALSE	canonical	3	453	junction_1	119.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTACCCTTGCTGTA	NA	False	NA	NA	False	AATAAA	-23	NA	135488442	135491337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_135488469_135490846_135490892_135491052
Isoform_112342_4	chr2	+	538	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	-2463	at_least_one_novel_splicesite	FALSE	canonical	3	453	junction_1	119.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGAAAATGAAAACA	NA	False	NA	NA	False	NA	NA	NA	135488443	135491520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_135488469_135490846_135490892_135491052
Isoform_112343_14	chr2	+	708	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	2	intron_retention	FALSE	canonical	3	453	junction_1	106.871677986057	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTGAGCCCAAAATCAT	NA	False	NA	27	True	AATAAA	-37	NA	135488443	135493985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417
Isoform_112344_179	chr2	+	419	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	252.149137416728	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTGAGCCCAAAATCAT	NA	False	NA	27	True	AATAAA	-37	NA	135488443	135493985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493478_135493766
Isoform_112346_53	chr2	+	382	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	0	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_4	128.141523324799	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	False	NA	25	True	AATAAA	-35	NA	135488442	135493983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493442_135493766
Isoform_112348_43	chr2	+	349	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.688048003968	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTGAGCCCAAAATCAT	NA	False	NA	27	True	AATAAA	-37	NA	135488443	135493985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_135488469_135490846_135490892_135493417_135493478_135493766
Isoform_112349_7	chr2	+	310	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	-1	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_2	130.516920997496	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACTCTGAGCCCAAAAT	NA	False	NA	24	True	AATAAA	-34	NA	135488443	135493982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_135488469_135490846_135490892_135493417_135493442_135493766
Isoform_112351_34	chr2	+	3854	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2252	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.5845724450749	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157262615	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_157262723_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_112353_47	chr2	+	3978	15	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2243	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	44.3039133112852	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157262606	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_157262723_157263520_157263636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_112359_64	chr2	+	5929	34	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	20.7397623189571	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	35022232	35068834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
Isoform_112360_6	chr2	+	5926	34	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_8	25.7362121742864	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	35022232	35068834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037246_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
Isoform_112365_8	chr2	+	12201	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24422	-4	intron_retention	TRUE	canonical	3	67	junction_1	51.1541648571319	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGGTGTTGGGAGGT	8230	False	NA	10	True	AATAAA	-21	NA	119703286	119798226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
Isoform_112368_5	chr2	+	12051	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24417	-2	intron_retention	FALSE	canonical	3	35	junction_13	53.7028159276897	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTGTTGGGAGGTTT	8235	False	NA	12	True	AATAAA	-23	NA	119703291	119798228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
Isoform_112370_16	chr2	+	4311	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-105	intron_retention	FALSE	canonical	1	4	junction_1	36.4245796132227	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173918111	173941458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_173918932_173926438_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
Isoform_112371_9	chr2	+	4416	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	4	junction_1	36.4245796132227	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATTCCTAGTATTA	NA	False	NA	125	True	AATAAA	-23	NA	173918111	173941563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_173918932_173926438_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
Isoform_112375_16	chr2	+	4291	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-113	intron_retention	FALSE	canonical	3	30	junction_1	23.5554058096468	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAAAATGACTTTTTTTT	NA	False	NA	12	True	AATAAA	-21	NA	173918111	173941450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_173918932_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
Isoform_112377_20	chr2	+	1629	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9322	2	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCGTTTCTCACCCTT	NA	False	NA	13	True	ATTAAA	-16	NA	156572733	156604877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_112379_36	chr2	+	1460	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9493	4	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTTTCTCACCCTTCA	NA	False	NA	15	True	ATTAAA	-18	NA	156572904	156604879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_11238_16	chr11	-	1944	10	FSM	ENSMUSG00000020432.13	ENSMUST00000020710.11	1897	10	-49	2	0	-2	multi-exon	FALSE	canonical	3	8	junction_9	45.2714719535328	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGACGTAGAGTCCTG	NA	False	NA	-13	True	ATTAAA	-15	NA	3882044	3867193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3881975
Isoform_112383_55	chr2	+	3124	3	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	12.5	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165652209	165660298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_165652330_165657273_165657586_165657606
Isoform_112385_13	chr2	+	2006	3	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	9	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCCAAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	165652161	165660307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_165652330_165657273_165657453_165658648
Isoform_112389_3	chr2	+	476	4	Fusion	ENSMUSG00000078872.10_ENSMUSG00000095199.9	novel	461	4	NA	NA	-181090	33906	multi-exon	FALSE	canonical	0	0	junction_2	19.6864307469779	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACACCATGACTGTAAT	NA	False	NA	NA	False	NA	NA	NA	176031702	176813046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_176031884_176220781_176220909_176776368_176776430_176812939
Isoform_11239_18	chr11	-	1908	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109991.8	1943	10	34	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_9	47.4250545858319	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGACGTAGAGTCCTGG	NA	False	NA	-12	True	ATTAAA	-16	NA	3882044	3867192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3882012
Isoform_112393_11	chr2	+	1604	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9543	-6	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	144.162963343572	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGGTCTGTCATTGA	NA	False	NA	13	True	ATTAAA	-25	NA	162873905	162888055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_112398_10	chr2	+	1449	5	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9544	-5	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	186.483745940497	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	14	True	ATTAAA	-26	NA	162873906	162888056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_162874156_162875154_162875224_162882546_162882635_162884610_162884720_162887122
Isoform_112401_30	chr2	+	1773	2	NNC	ENSMUSG00000044628.6	novel	1137	2	NA	NA	-698	0	intron_retention	FALSE	canonical	3	42	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTGTTCACTGATTGA	NA	False	NA	16	True	ATTAAA	-17	NA	25132242	25134273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_25132536_25132793
Isoform_112402_36	chr2	+	3793	14	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	38.3334791181517	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157260369	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_157260416_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_112404_11	chr2	+	3908	15	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	47.3751851000638	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157260369	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_157260416_157263520_157263636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_112405_24	chr2	+	2802	3	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	282	-2	intron_retention	FALSE	canonical	3	30	junction_1	93.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAATTTTTTGTTGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	156682301	156697488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156682438_156686075_156686302_156695048
Isoform_112407_13	chr2	+	2689	4	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	272	-8	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	82.8908251188809	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAAACTGAATTTTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	156682291	156697482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156682438_156686075_156686302_156695048_156695149_156695265
Isoform_112409_7	chr2	+	1895	2	Intergenic	novelGene_6812	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTATGGTGATTAT	NA	False	NA	NA	False	NA	NA	NA	168847924	168866326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168848074_168864580
Isoform_11241_134	chr11	-	1949	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109989.10	1949	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	32.7813557369218	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882044	3867191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881975
Isoform_112410_11	chr2	+	1270	3	Intergenic	novelGene_6813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	9	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTATGGTGATTAT	NA	False	NA	NA	False	NA	NA	NA	168847925	168866326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168848074_168864580_168864668_168865291
Isoform_112411_6	chr2	+	535	3	Intergenic	novelGene_6815	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTCCCGTGAGAGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	168847932	168878548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168848074_168864580_168864668_168878241
Isoform_112412_4	chr2	+	425	2	Intergenic	novelGene_6817	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGTGCTGTCCCGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	168847949	168878542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168848074_168878241
Isoform_112413_6	chr2	+	1818	2	Intergenic	novelGene_6814	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTATTGTGGTGAAAT	NA	False	NA	NA	False	AATAAA	-29	NA	168847930	168850254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168848074_168848579
Isoform_112414_4	chr2	+	2390	2	Genic_Genomic	ENSMUSG00000052368.3	novel	1361	1	NA	NA	-13995	-9	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCCATTTCTGGTGTC	NA	False	NA	12	True	AATAAA	-24	NA	168847949	168863296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_168848074_168861030
Isoform_112415_47	chr2	+	2908	20	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	34.216031945643	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126684	32145015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_32126829_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
Isoform_112417_41	chr2	+	2652	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	-3914	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	238.451078141129	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	20	True	AATAAA	-22	NA	172387598	172400537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_172387708_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_11242_131	chr11	-	1912	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109993.9	2027	10	115	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	35.4989132158461	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882044	3867191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3882012
Isoform_112421_16	chr2	+	3358	22	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11885	863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	43.0122589707714	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	NA	False	NA	28	True	AATAAA	-38	NA	156274916	156382769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_112422_5	chr2	+	5788	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11848	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	33.6114191905073	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	NA	False	NA	11	True	AATAAA	-26	NA	156274879	156385132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
Isoform_112424_4	chr2	+	2245	15	NNC	ENSMUSG00000027624.21	novel	640	5	NA	NA	11949	863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.1730819606139	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	NA	False	NA	28	True	AATAAA	-38	NA	156274980	156382769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156274988_156336970_156336978_156338405_156338414_156345564_156345657_156348288_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376634_156379351_156379404_156381729
Isoform_112426_8	chr2	+	2484	2	Intergenic	novelGene_5990	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCTATTAAGGAAGAGC	NA	False	NA	NA	False	AATAAA	-16	NA	17940976	17953357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_17941086_17950982
Isoform_11243_25	chr11	-	1893	10	NNC	ENSMUSG00000020432.13	novel	1949	10	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	43.1225643434566	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGACGTAGAGTCCTG	NA	False	NA	-13	True	ATTAAA	-15	NA	3882047	3867193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881531_3881975
Isoform_112433_41	chr2	+	647	2	Intergenic	novelGene_6338	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGATGGTCGTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	75464372	75465116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_75464502_75464598
Isoform_112435_12	chr2	+	2734	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-256	-6	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	14.5140677711421	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGACACTTTTGGTTCAA	4089	False	NA	8	True	AATAAA	-21	NA	16360858	16756494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_16360983_16361295_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_112436_6	chr2	+	2844	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-363	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	14.5140677711421	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACACTTTTGGTTCAAATG	3982	False	NA	11	True	AATAAA	-24	NA	16360751	16756497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_16360983_16361295_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_112437_21	chr2	+	1923	7	NNC	ENSMUSG00000027582.17	novel	2072	6	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	46.3204418516634	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCTCAGTGGAGACTCA	NA	False	NA	8	True	ATTAAA	-15	NA	181007197	181022578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_181007286_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
Isoform_11244_16	chr11	-	1858	10	NNC	ENSMUSG00000020432.13	novel	1943	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	46.5015597773709	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882047	3867191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881531_3882012
Isoform_112440_4	chr2	+	729	4	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	1	2655	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.6386021641143	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGAGTGCCTGTGTT	NA	False	NA	9	True	ATTAAA	-20	NA	162232733	162238520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_162232958_162233218_162233320_162238066_162238330_162238379
Isoform_112441_8	chr2	+	855	5	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	1	2657	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.2621655221252	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGAGTGCCTGTGTTTG	NA	False	NA	11	True	ATTAAA	-22	NA	162232733	162238522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_162232958_162233218_162233320_162236359_162236484_162238066_162238330_162238379
Isoform_112442_16	chr2	+	2305	5	NNC	ENSMUSG00000001999.16	novel	657	6	NA	NA	0	878	intron_retention	FALSE	canonical	3	18	junction_1	73.8896981994107	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCGTCCTGGGATTCA	2237	False	NA	NA	False	NA	NA	NA	126912612	126930668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_126912646_126922449_126922579_126924851_126924971_126927882_126928003_126928764
Isoform_112443_20	chr2	+	1125	8	NNC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	61.7962418776747	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGAGAATAGTGTTGATG	2238	False	NA	NA	False	AATAAA	-17	NA	126912613	126939001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_126912646_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
Isoform_112444_15	chr2	+	2136	10	NNC	ENSMUSG00000039069.20	novel	1444	7	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	58.4987073825747	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712411	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179712878_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
Isoform_112446_4	chr2	+	2036	9	NNC	ENSMUSG00000039069.20	novel	1444	7	NA	NA	33	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	69.5211298814972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712417	179727689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_179712878_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
Isoform_11245_3	chr11	-	2704	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	-1296	3	-1296	-3	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTCCTTTTCATTTCCT	NA	False	NA	-2	True	AATAAA	-14	NA	4046741	4041482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
Isoform_112451_3	chr2	-	1412	4	FSM	ENSMUSG00000078897.11	ENSMUST00000152941.2	1198	4	-36	-178	-11	178	multi-exon	FALSE	canonical	3	20	junction_2	107.953693776545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGCTCTGTTCAATGAAA	NA	False	NA	NA	False	NA	NA	NA	175277611	175265507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_175266617_175266821_175266949_175273972_175274028_175277490
Isoform_112452_35	chr2	+	4470	5	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3650	2786	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	106.376689175778	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175529679	175545998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_175529815_175533277_175533333_175540356_175540484_175540688_175540750_175541906
Isoform_112454_5	chr2	+	4328	3	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8617	2169	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174919676	174933880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_174919909_174928631_174928693_174929845
Isoform_112456_18	chr2	+	5556	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2469	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	16.9925003867506	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCACTGTCCTTATTTCT	NA	False	NA	13	True	AATAAA	-18	NA	155455600	155476125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_155455656_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
Isoform_112458_18	chr2	+	524	4	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-27278	-7	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	58.0344725141876	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAAGTGTGGTGGTATA	2608	False	NA	NA	False	NA	NA	NA	60214590	60242916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_60214668_60241980_60242062_60242190_60242353_60242712
Isoform_11246_155	chr11	-	1383	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	27	1	27	-1	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTTTTCATTTCCTCT	NA	False	NA	0	True	AATAAA	-16	NA	4045418	4041480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
Isoform_112460_22	chr2	+	1431	12	NNC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-96	131	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	399.254304923566	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGGTATATAGCTGTG	7090	False	NA	27	True	AATAAA	-24	NA	127432264	127445906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_127432322_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_112462_15	chr2	+	3361	13	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	29669	4	intron_retention	FALSE	canonical	1	3	junction_1	158.899579574299	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTTTCTCACCCTTCA	9368	False	NA	15	True	ATTAAA	-18	NA	156485293	156604879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_156485362_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_112467_3	chr2	+	1685	4	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	-621	-943	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	12.5521135891752	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTAGCTTGTACTGTGAC	7579	False	NA	18	True	AATAAA	-18	NA	30909209	30912651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_30909404_30909796_30909900_30910840_30910913_30911335
Isoform_112468_14	chr2	+	1613	4	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	-548	-942	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	12.5521135891752	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGCTTGTACTGTGACA	7652	False	NA	19	True	AATAAA	-19	NA	30909282	30912652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_30909404_30909796_30909900_30910840_30910913_30911335
Isoform_112470_21	chr2	+	2111	13	NNC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	-758	-4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	20.5877188310572	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAAGGGTCAGCTTCTCT	NA	False	NA	13	True	AATAAA	-23	NA	152949629	152993355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_152949942_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
Isoform_112471_20	chr2	+	2770	2	Genic_Genomic	ENSMUSG00000040495.5	novel	1440	1	NA	NA	-5062	1141	multi-exon	FALSE	canonical	1	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAGTTTATTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	91752531	91760174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_91752689_91757561
Isoform_112472_8	chr2	+	3822	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	-195	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.5845724450749	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157265840	157313757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_157265917_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_112476_4	chr2	+	3899	4	NNC	ENSMUSG00000042155.4	novel	839	2	NA	NA	408	-656	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGTTAAGATGTCCTA	5880	False	NA	NA	False	AATAAA	-19	NA	69653121	69666339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_69653333_69654130_69655345_69659189_69659343_69664018
Isoform_112477_8	chr2	+	687	2	NNC	ENSMUSG00000039849.7	novel	611	2	NA	NA	11	-32	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCGTTAACAACCAGT	5960	False	NA	12	True	AATAAA	-22	NA	164721287	164725087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_164721582_164724694
Isoform_112478_12	chr2	+	2843	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	29	-3080	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	44.7995535692042	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTGTGAGGGTCTTGG	5978	False	NA	14	True	AATACA	-12	NA	164721305	164733294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_164721582_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
Isoform_112479_3	chr2	+	4245	2	Antisense	novelGene_ENSMUSG00000069188.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGCTTATTTTATTA	4815	False	NA	NA	False	NA	NA	NA	4959490	4965244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_4962788_4964296
Isoform_11248_18	chr11	-	2577	12	FSM	ENSMUSG00000003585.14	ENSMUST00000003681.8	2631	12	47	7	-31	-7	multi-exon	FALSE	canonical	3	7	junction_11	8.90816321700644	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAGAGCAGAATTCAT	NA	False	NA	-7	True	AATAAA	-15	NA	4068784	4047045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624
Isoform_112481_9	chr2	+	3417	9	NNC	ENSMUSG00000037523.14	novel	2959	8	NA	NA	-1307	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	77.8362664508004	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGAGTTCCAAATT	5953	False	NA	12	True	ATTAAA	-17	NA	131074675	131089943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_131074811_131075113_131075274_131075729_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_112482_14	chr2	+	1583	2	NNC	ENSMUSG00000109946.2	novel	509	2	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	False	NA	3	True	AATAAA	-15	NA	27332537	27334233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_27332827_27332939
Isoform_112484_4	chr2	+	6591	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	603	1	intron_retention	FALSE	canonical	2	14	junction_1	70.1929404490857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGACTTGCCTTTCTTC	NA	False	NA	10	True	ATTAAA	-20	NA	35471674	35621005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_35472052_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_112485_5	chr2	+	1661	5	Intergenic	novelGene_6837	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_3	19.0705925445435	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAATTTATATTTATTTA	NA	False	NA	3	True	ATTAAA	-16	NA	172419570	172468689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_172419745_172420215_172420303_172467241_172467428_172467454_172468043_172468063
Isoform_112486_4	chr2	+	6740	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3665	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.7370385306165	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	7809	False	NA	11	True	AATAAA	-13	NA	59606389	59676059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_59606661_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
Isoform_112487_4	chr2	+	6772	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3676	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	47.8510971661048	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	7798	False	NA	11	True	AATAAA	-13	NA	59606378	59676059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_59606661_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
Isoform_112488_6	chr2	+	5227	32	NNC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	7369	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.0263998793953	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCACTGTCCTTATTTC	NA	False	NA	12	True	AATAAA	-17	NA	155460500	155476124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_155460693_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
Isoform_11249_9	chr11	-	2899	13	NNC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-4	-5	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_12	10.820184327861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAGCAGAATTCATTG	NA	False	NA	-5	True	AATAAA	-17	NA	4073419	4047043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624_4068851_4073165
Isoform_112490_3	chr2	+	3880	8	Fusion	ENSMUSG00000063611.6_ENSMUSG00000026829.10	novel	1335	7	NA	NA	-17484	-1	multi-exon	FALSE	canonical	1	1	junction_2	2.0995626366713	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTTGCCTTGGTCATG	NA	False	NA	7	True	NA	NA	NA	28369418	28397784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_+_28369616_28386911_28387077_28387680_28387849_28388387_28388454_28392078_28392130_28392208_28392245_28393137_28393273_28394722
Isoform_112495_4	chr2	+	695	2	Intergenic	novelGene_6810	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGTCCCTTGTTTTTC	NA	False	NA	NA	False	AATATA	-11	NA	168798158	168800163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168798567_168799876
Isoform_112496_4	chr2	+	920	2	Intergenic	novelGene_6811	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGTCCCTTGTTTTTC	NA	False	NA	NA	False	AATATA	-11	NA	168798169	168800163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168798567_168799640
Isoform_112498_7	chr2	+	1140	7	NNC	ENSMUSG00000008333.13	novel	636	5	NA	NA	-30	-1106	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	366.493140757398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTTTATTGTCCTATC	2050	False	NA	20	True	AATAAA	-20	NA	142905020	142913667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_142905266_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
Isoform_11250_7	chr11	-	2669	12	NIC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	9.93865481361196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAGAGCAGAATTCAT	NA	False	NA	-7	True	AATAAA	-15	NA	4073417	4047045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4073165
Isoform_112500_14	chr2	+	934	2	NNC	ENSMUSG00000042745.10	novel	934	2	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGCTGTGACTTCTTGG	4426	False	NA	12	True	ATTAAA	-16	NA	152578174	152579329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_152578671_152578891
Isoform_112505_9	chr2	+	2058	7	NNC	ENSMUSG00000026817.15	novel	752	4	NA	NA	-183	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	109.767937030811	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGTGAGTGTATTGAA	NA	False	NA	14	True	AATAAA	-18	NA	32518218	32525067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_32518315_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_112506_6	chr2	+	3776	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	1986	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	39.5909558735609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157268297	157313758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_157268327_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_112507_3	chr2	+	2354	8	NNC	ENSMUSG00000026930.16	novel	794	4	NA	NA	-156	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.63183450811033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTCTGTTGGAAT	9019	False	NA	NA	False	AATAAA	-14	NA	26215699	26238248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_26215774_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230597_26234613_26234771_26235162_26235372_26236818
Isoform_112509_7	chr2	+	529	2	Intergenic	novelGene_6183	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGATTGAGTCTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	34956849	34958756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34957071_34958448
Isoform_11251_30	chr11	-	2595	11	NIC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-4	-7	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	5.85149553533112	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAGAGCAGAATTCAT	NA	False	NA	-7	True	AATAAA	-15	NA	4073419	4047045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4073165
Isoform_112513_4	chr2	+	995	3	Intergenic	novelGene_6317	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACACTATTGAGTTGG	NA	False	NA	NA	False	NA	NA	NA	72497964	72502816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_72498031_72500915_72501123_72502094
Isoform_112515_5	chr2	+	5379	36	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	3140	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.0440730276889	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGCCACTGTCCTTAT	NA	False	NA	9	True	AATAAA	-14	NA	155456271	155476121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_155456339_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
Isoform_112516_4	chr2	+	3778	3	NNC	ENSMUSG00000048550.18	novel	3899	3	NA	NA	-4	310	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCAGCTCTCTGGTTTTG	4795	False	NA	NA	False	ATTAAA	-15	NA	21210545	21219497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_21210870_21214695_21214853_21216200
Isoform_112517_4	chr2	+	2827	3	NNC	ENSMUSG00000048550.18	novel	3899	3	NA	NA	-6	454	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCTTTATTTT	4793	False	NA	15	True	AATAAA	-24	NA	21210543	21218544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_21210870_21214695_21214853_21216200
Isoform_11252_7	chr11	-	5017	12	FSM	ENSMUSG00000051427.15	ENSMUST00000093381.11	5015	12	-5	3	-3	-3	multi-exon	FALSE	canonical	1	1	junction_10	2.2672661660618	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTGTTTTGTGTTTT	8488	False	NA	-7	True	ATTAAA	-13	NA	4110296	4091125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4093936_4094025_4094115_4094509_4094650_4096233_4096403_4096541_4096719_4097168_4097360_4097699_4097778_4098438_4099085_4099930_4100103_4101671_4101931_4102908_4103057_4110158
Isoform_112524_5	chr2	+	3200	2	Antisense	novelGene_ENSMUSG00000050556.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	166971380	166975876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_166971491_166972786
Isoform_112527_3	chr2	+	2463	2	Intergenic	novelGene_6435	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAACAGATCGTATGTG	NA	False	NA	NA	False	AATAAA	-27	NA	93756693	93760571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_93756773_93758187
Isoform_11253_19	chr11	-	1934	11	FSM	ENSMUSG00000020419.12	ENSMUST00000109949.8	1343	11	-10	-581	-10	12	multi-exon	FALSE	canonical	3	44	junction_4	69.004347689113	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTAACATGGGGTTT	NA	False	NA	-8	True	AATAAA	-23	NA	4391092	4295801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
Isoform_112532_5	chr2	+	6544	14	NNC	ENSMUSG00000026883.18	novel	6392	14	NA	NA	-93	0	intron_retention	FALSE	canonical	3	10	junction_1	63.6432363921064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	286	False	NA	9	True	ATTAAA	-19	NA	35581912	35621004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_35582482_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_112536_3	chr2	+	4553	12	NNC	ENSMUSG00000042548.15	novel	717	4	NA	NA	881	-1909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.7356338200143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAGTGTGTGTATTT	NA	False	NA	20	True	AATAAA	-22	NA	153188645	153244018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_153188689_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
Isoform_112537_4	chr2	+	2828	19	NNC	ENSMUSG00000027605.19	novel	879	9	NA	NA	-44019	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.6042168031531	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAACTGCTTTTTTT	NA	False	NA	10	True	AATAAA	-14	NA	155315848	155404657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_155315987_155352595_155352701_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
Isoform_11254_4	chr11	-	1862	12	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-58	9	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_4	68.3951813101353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTATGTAACATGGGG	NA	False	NA	-11	True	AATAAA	-20	NA	4391163	4295804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876_4390941_4391080
Isoform_112548_3	chr2	+	190	1	Intergenic	novelGene_5948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATGTCCCAGCTA	NA	False	NA	NA	False	NA	NA	NA	5131260	5131450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_5131300_5131400
Isoform_11255_6	chr11	-	1901	10	NIC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-4	12	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	73.2602329261589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTAACATGGGGTTT	NA	False	NA	-8	True	AATAAA	-23	NA	4391086	4295801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
Isoform_112550_3	chr2	+	155	2	Antisense	novelGene_ENSMUSG00000039715.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGAGTGAGCAGGGACT	NA	False	NA	NA	False	NA	NA	NA	29934172	29934348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_29934239_29934259
Isoform_112559_15	chr2	-	406	1	Antisense	novelGene_ENSMUSG00000054766.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAATAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29961417	29961011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_29961000_29961400
Isoform_11256_24	chr11	-	2651	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	19	-2087	-4	1907	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAGAAAAAAAAAATCAG	NA	False	NA	27	True	AATAAA	-42	NA	4391086	4372160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
Isoform_112576_3	chr2	-	284	1	Antisense	novelGene_ENSMUSG00000054766.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	29961978	29961694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_29961700_29962000
Isoform_112590_35	chr2	-	170	1	Intergenic	novelGene_6084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	29978095	29977925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_29977900_29978100
Isoform_112598_157	chr2	+	178	1	Intergenic	novelGene_6085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATTATCAGGGGC	NA	False	NA	NA	False	NA	NA	NA	30045951	30046129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_30046000_30046100
Isoform_112599_129	chr2	+	176	1	Intergenic	novelGene_6086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATTTGTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	30047915	30048091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_30047900_30048100
Isoform_112603_18	chr2	-	1529	1	NIC	ENSMUSG00000039660.17	novel	2123	10	NA	NA	0	-551	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATGAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	30068454	30066925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30066900_30068500
Isoform_112608_3	chr2	+	4262	1	Intergenic	novelGene_6087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30095901	30100163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_30095900_30100200
Isoform_112609_68	chr2	-	179	1	Intergenic	novelGene_6088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAATAACAAG	9015	False	NA	NA	False	NA	NA	NA	30122047	30121868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_30121900_30122000
Isoform_112610_3	chr2	-	420	1	FSM	ENSMUSG00000100747.5	ENSMUST00000187343.2	1429	1	604	405	604	293	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAAGGTTTCTTGGG	6044	False	NA	NA	False	AATAAA	-13	NA	30127631	30127211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30127200_30127600
Isoform_112613_148	chr2	-	2079	1	FSM	ENSMUSG00000075419.5	ENSMUST00000100219.5	2104	1	-6	31	-6	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTTATTTTTGCTG	2242	False	NA	-7	True	AATAAA	-13	NA	30176352	30174273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30174300_30176400
Isoform_112615_4	chr2	-	176	1	Intergenic	novelGene_6089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAGATTCGTTTAT	4985	False	NA	NA	False	NA	NA	NA	30189174	30188998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_30189000_30189200
Isoform_112616_99	chr2	-	188	1	Intergenic	novelGene_6090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3670	False	NA	NA	False	NA	NA	NA	30202144	30201956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_30202000_30202100
Isoform_112619_133	chr2	-	180	1	Intergenic	novelGene_6091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGATGAATCTT	NA	False	NA	NA	False	NA	NA	NA	30251783	30251603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_30251600_30251800
Isoform_112621_107	chr4	-	176	1	Intergenic	novelGene_8139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9527	False	NA	NA	False	NA	NA	NA	141415052	141414876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141414900_141415100
Isoform_112622_3	chr2	-	4664	1	NIC	ENSMUSG00000026853.16	novel	4224	15	NA	NA	-9	2175	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAAAGTAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	30305545	30300881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30300900_30305500
Isoform_112623_3	chr2	+	305	1	Antisense	novelGene_ENSMUSG00000026853.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	30305643	30305948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_30305600_30305900
Isoform_112631_15	chr2	+	176	1	Intergenic	novelGene_6093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	30349555	30349731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_30349600_30349700
Isoform_112632_9	chr2	-	175	1	Intergenic	novelGene_6094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGATTTATTT	6449	False	NA	NA	False	NA	NA	NA	30352860	30352685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_30352700_30352900
Isoform_112635_101	chr2	-	1585	1	FSM	ENSMUSG00000089762.4	ENSMUST00000065134.4	2683	1	2	1096	2	-1096	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTAAAAATCTTGGACTT	NA	False	NA	-21	True	AATAAA	-8	NA	30364229	30362644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_30362600_30364200
Isoform_112638_4	chr2	-	2282	1	NIC	ENSMUSG00000044320.15	novel	1033	8	NA	NA	-27	-2200	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACACTAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	30691746	30689464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30689500_30691700
Isoform_112639_4	chr2	-	3368	1	Antisense	novelGene_ENSMUSG00000085491.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30697557	30694189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_30694200_30697600
Isoform_112640_35	chr2	+	1380	1	NIC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	1	-6841	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30697969	30699349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_30698000_30699300
Isoform_112642_7	chr2	-	2189	1	NIC	ENSMUSG00000039483.11	novel	4147	6	NA	NA	6	-637	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATAAATCTTTACAA	1730	False	NA	NA	False	NA	NA	NA	30718297	30716108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_30716100_30718300
Isoform_112643_4	chr2	+	178	1	Intergenic	novelGene_6095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACAGGTAAGAAGTCACC	4850	False	NA	NA	False	AATAAA	-13	NA	30724126	30724304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_30724100_30724300
Isoform_112649_3	chr2	-	179	1	Intergenic	novelGene_6096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAATAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	30733754	30733575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_30733600_30733800
Isoform_112654_3	chr2	+	181	1	Intergenic	novelGene_6097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACCCAAA	NA	False	NA	NA	False	NA	NA	NA	30797134	30797315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_30797100_30797300
Isoform_112655_75	chr2	-	186	1	Intergenic	novelGene_6098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAGAAAAA	7235	False	NA	NA	False	NA	NA	NA	30821034	30820848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_30820800_30821000
Isoform_112658_7	chr2	-	172	1	Intergenic	novelGene_6099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	30859032	30858860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_30858900_30859000
Isoform_11266_80	chr11	-	5751	19	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	35	1	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	50.097466730759	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	NA	False	NA	-11	True	AATAAA	-28	NA	4544780	4430866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
Isoform_112661_4	chr2	+	2140	1	FSM	ENSMUSG00000026854.17	ENSMUST00000192882.2	1901	1	35	-274	6	274	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	30872380	30874520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_30872400_30874500
Isoform_112666_3	chr2	+	384	1	Antisense	novelGene_ENSMUSG00000075415.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAGAAAACAAAACAAA	1947	False	NA	NA	False	NA	NA	NA	30921466	30921850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_30921500_30921800
Isoform_112668_166	chr2	+	176	1	Intergenic	novelGene_6100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGAAAGAAAA	705	False	NA	NA	False	NA	NA	NA	30953690	30953866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_30953700_30953900
Isoform_112669_7	chr2	-	214	1	Intergenic	novelGene_6101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTGTGCTGAGCCACG	7179	False	NA	NA	False	NA	NA	NA	30975024	30974810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_30974800_30975000
Isoform_11267_13	chr11	-	5557	19	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	11	-195	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	50.097466730759	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTTTTTGATCAATGAA	NA	False	NA	NA	False	AATAAA	-15	NA	4544804	4431084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
Isoform_112673_722	chr2	-	179	1	Intergenic	novelGene_6102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	722	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGCTCTT	764	False	NA	NA	False	NA	NA	NA	31036024	31035845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31035800_31036000
Isoform_112674_14	chr2	-	176	1	Intergenic	novelGene_6103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGC	3156	False	NA	NA	False	NA	NA	NA	31051047	31050871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31050900_31051000
Isoform_112675_6	chr2	-	168	1	Intergenic	novelGene_6104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAATCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	31065486	31065318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31065300_31065500
Isoform_112676_18	chr2	-	179	1	Intergenic	novelGene_6105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCAATCTGGAACCCC	NA	False	NA	NA	False	NA	NA	NA	31089871	31089692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31089700_31089900
Isoform_112680_23	chr2	+	181	1	Intergenic	novelGene_6106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACATATTCAAAC	NA	False	NA	NA	False	NA	NA	NA	31118885	31119066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31118900_31119100
Isoform_112681_35	chr2	-	173	1	Intergenic	novelGene_6107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAAAAATCAAAGC	NA	False	NA	NA	False	NA	NA	NA	31142221	31142048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31142000_31142200
Isoform_112682_6	chr2	-	161	1	Intergenic	novelGene_6108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTACTCATATACAATT	NA	False	NA	NA	False	NA	NA	NA	31178683	31178522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31178500_31178700
Isoform_112684_3	chr2	+	930	1	Intergenic	novelGene_6109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGGCACGGTGCGCC	NA	False	NA	NA	False	TATAAA	-16	NA	31195059	31195989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31195100_31196000
Isoform_112686_32	chr2	-	1555	1	Intergenic	novelGene_6111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	31380642	31379087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31379100_31380600
Isoform_112688_108	chr2	+	177	1	Intergenic	novelGene_6112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31421596	31421773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31421600_31421800
Isoform_112689_8	chr2	+	174	1	Intergenic	novelGene_6113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAGAGGACCTAGGTT	NA	False	NA	NA	False	NA	NA	NA	31442795	31442969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31442800_31443000
Isoform_112690_6	chr2	-	180	1	Intergenic	novelGene_6114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGTGGCTGGAAT	8883	False	NA	NA	False	NA	NA	NA	31472317	31472137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31472100_31472300
Isoform_112700_21	chr5	-	168	1	Intergenic	novelGene_8547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCATGAATTG	NA	False	NA	NA	False	NA	NA	NA	73043888	73043720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_73043700_73043900
Isoform_112702_46	chr2	-	240	1	Intergenic	novelGene_6116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCCAGATACAAGCTCC	NA	False	NA	NA	False	AATGAA	-36	NA	31597394	31597154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31597200_31597400
Isoform_112704_22	chr2	-	174	1	Intergenic	novelGene_6118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAAAAGTACC	NA	False	NA	NA	False	NA	NA	NA	31622533	31622359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31622400_31622500
Isoform_112706_27	chr2	+	174	1	Intergenic	novelGene_6119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	31638604	31638778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31638600_31638800
Isoform_11271_11	chr11	-	5716	19	NNC	ENSMUSG00000034354.18	novel	5534	18	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_18	68.2081961694587	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGCGAACGAGTTCTA	NA	False	NA	-19	True	AATAAA	-20	NA	4544784	4430874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4496188_4496269_4544602
Isoform_112714_3	chr2	-	184	1	Intergenic	novelGene_6120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAATGATTTTTATT	NA	False	NA	NA	False	NA	NA	NA	31762731	31762547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31762500_31762700
Isoform_112715_4	chr2	+	159	1	Intergenic	novelGene_6121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31799132	31799291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31799100_31799300
Isoform_112718_8	chr2	+	173	1	Intergenic	novelGene_6122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACAGTTAGCAGATT	NA	False	NA	NA	False	NA	NA	NA	31905159	31905332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31905200_31905300
Isoform_112720_26	chr2	+	220	1	Intergenic	novelGene_6123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGTATGATCCCAGCAT	NA	False	NA	NA	False	NA	NA	NA	31919244	31919464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31919200_31919500
Isoform_112722_25	chr2	+	178	1	Intergenic	novelGene_6124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	31931802	31931980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31931800_31932000
Isoform_112723_70	chr2	+	177	1	Intergenic	novelGene_6125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	723	False	NA	NA	False	NA	NA	NA	31966406	31966583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31966400_31966600
Isoform_112724_115	chr2	+	154	1	Intergenic	novelGene_6126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATAAATAAATCTTAAA	5580	False	NA	NA	False	NA	NA	NA	31971263	31971417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31971300_31971400
Isoform_112725_4	chr2	+	2641	1	NIC	ENSMUSG00000051373.6	novel	1947	2	NA	NA	-7	-11928	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31985569	31988210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_31985600_31988200
Isoform_112726_9	chr2	+	175	1	Intergenic	novelGene_6127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATAATAAGGTA	7442	False	NA	NA	False	NA	NA	NA	31998803	31998978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_31998800_31999000
Isoform_112728_9	chr2	-	172	1	Intergenic	novelGene_6129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	32026728	32026556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32026600_32026700
Isoform_112729_7	chr2	+	172	1	Intergenic	novelGene_6130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATAAAAACAAGGGC	NA	False	NA	NA	False	NA	NA	NA	32034185	32034357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_32034200_32034400
Isoform_112730_17	chr2	-	175	1	Intergenic	novelGene_6131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAATTAAAAATAAA	3680	False	NA	NA	False	NA	NA	NA	32061767	32061592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32061600_32061800
Isoform_11274_187	chr11	-	5640	18	FSM	ENSMUSG00000034354.18	ENSMUST00000109943.10	5674	18	35	-1	35	1	multi-exon	FALSE	canonical	3	144	junction_2	25.6297837124855	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	NA	False	NA	-11	True	AATAAA	-28	NA	4544780	4430866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
Isoform_11275_12	chr11	-	5728	18	FSM	ENSMUSG00000034354.18	ENSMUST00000109943.10	5674	18	-50	-4	-2	4	multi-exon	TRUE	canonical	3	144	junction_2	25.6297837124855	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTTCTAATTCTTTGCCC	NA	False	NA	-8	True	AATAAA	-31	NA	4544865	4430863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
Isoform_112777_7	chr2	-	175	1	Intergenic	novelGene_6133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGGAGCAGACAGTGAC	NA	False	NA	NA	False	NA	NA	NA	32212834	32212659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32212700_32212800
Isoform_112778_5	chr2	+	160	1	Intergenic	novelGene_6134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAGAAAGGGG	7880	False	NA	NA	False	NA	NA	NA	32245198	32245358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_32245200_32245400
Isoform_112779_5	chr2	-	183	1	Intergenic	novelGene_6135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAACAGAAACT	NA	False	NA	NA	False	NA	NA	NA	32264003	32263820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32263800_32264000
Isoform_11278_122	chr11	-	513	3	FSM	ENSMUSG00000059534.9	ENSMUST00000151559.2	510	3	-1	-2	-1	0	multi-exon	FALSE	canonical	3	506	junction_1	31	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTTTGCACGAGTCCT	NA	False	NA	-6	True	AATAAA	-19	NA	4654335	4651972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4652221_4653903_4653990_4654156
Isoform_112780_7	chr2	-	2726	1	NIC	ENSMUSG00000039195.5	novel	2618	2	NA	NA	29	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCCCCTTCTTCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	32271845	32269119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32269100_32271800
Isoform_112781_6	chr2	-	2805	1	NIC	ENSMUSG00000039195.5	novel	680	2	NA	NA	22	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACCACTGCCCCCTTCTT	NA	False	NA	-8	True	ATTAAA	-10	NA	32271928	32269123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_32269100_32271900
Isoform_112783_29	chr2	+	189	1	Intergenic	novelGene_6136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTATTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	32356876	32357065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_32356900_32357100
Isoform_112784_38	chr2	+	174	1	Intergenic	novelGene_6137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACCAC	NA	False	NA	NA	False	NA	NA	NA	32358826	32359000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_32358800_32359000
Isoform_112788_9	chr2	+	2725	1	Genic_Genomic	ENSMUSG00000026810.13	novel	NA	NA	NA	NA	-11	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4762	False	NA	15	True	AATAAA	-16	NA	32460858	32463583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_32460900_32463600
Isoform_112789_4	chr2	-	185	1	Intergenic	novelGene_6138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACACTTTCAAGGA	NA	False	NA	NA	False	NA	NA	NA	32479072	32478887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32478900_32479100
Isoform_11279_1491	chr11	-	424	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	7	3	-1	-1	multi-exon	FALSE	canonical	3	8152	junction_1	0	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTTTGCACGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	4654335	4651975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4652221_4654156
Isoform_112790_19	chr2	+	167	1	Intergenic	novelGene_6139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	3741	False	NA	NA	False	NA	NA	NA	32528766	32528933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_32528800_32528900
Isoform_112793_36	chr2	-	174	1	Intergenic	novelGene_6140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTTGCTAGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	32547385	32547211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32547200_32547400
Isoform_112797_7	chr2	+	172	1	Intergenic	novelGene_6141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	743	False	NA	NA	False	NA	NA	NA	32588375	32588547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_32588400_32588500
Isoform_11280_17	chr11	-	577	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	27	-170	19	170	multi-exon	FALSE	canonical	3	8152	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTCCCAGTCTTTTGTT	NA	False	NA	NA	False	AATAGA	-16	NA	4654315	4651802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4652221_4654156
Isoform_112800_27	chr16	-	175	1	Intergenic	novelGene_4351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAAAAAAAAG	314	False	NA	NA	False	NA	NA	NA	17508567	17508392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_17508400_17508600
Isoform_112801_6	chr2	+	223	1	Intergenic	novelGene_6142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGGTGGCACACA	408	False	NA	NA	False	NA	NA	NA	32628848	32629071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_32628800_32629100
Isoform_112802_78	chr2	-	169	1	Intergenic	novelGene_6143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32727572	32727403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32727400_32727600
Isoform_112803_160	chr2	-	177	1	Intergenic	novelGene_6144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAACCATCCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	32743904	32743727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32743700_32743900
Isoform_112804_15	chr2	-	164	1	Intergenic	novelGene_6145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	32745234	32745070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32745100_32745200
Isoform_112805_10	chr1	+	176	1	Intergenic	novelGene_421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAATACTGAA	3770	False	NA	NA	False	NA	NA	NA	135328609	135328785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_135328600_135328800
Isoform_112806_8	chr2	+	1567	1	Intergenic	novelGene_5949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	5823093	5824660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_5823100_5824700
Isoform_112809_23	chr2	-	185	1	Intergenic	novelGene_6146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTCAAAAGTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32800271	32800086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32800100_32800300
Isoform_112813_9	chr2	-	173	1	Intergenic	novelGene_6147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	2514	False	NA	NA	False	NA	NA	NA	32826893	32826720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32826700_32826900
Isoform_112816_3	chr2	+	166	1	Intergenic	novelGene_6148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32862274	32862440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_32862300_32862400
Isoform_112817_179	chr2	-	168	1	Intergenic	novelGene_6149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	2400	False	NA	NA	False	NA	NA	NA	32873644	32873476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32873500_32873600
Isoform_112818_9	chr2	-	174	1	Intergenic	novelGene_6150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAATAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32886485	32886311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32886300_32886500
Isoform_112819_91	chr2	-	182	1	FSM	ENSMUSG00000104277.2	ENSMUST00000193214.2	3789	1	2489	1118	2489	-1118	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTACATTGCAGATGTAA	NA	False	NA	-1	True	NA	NA	NA	32889838	32889656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_32889700_32889800
Isoform_112821_21	chr10	+	208	1	Intergenic	novelGene_1197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	119089099	119089307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_119089100_119089300
Isoform_112823_8	chr2	+	712	1	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	-11456	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	1936	False	NA	NA	False	NA	NA	NA	5850063	5850775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_5850100_5850800
Isoform_112824_33	chr2	+	189	1	Intergenic	novelGene_6151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	33268688	33268877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_33268700_33268900
Isoform_11283_42	chr11	-	2975	5	FSM	ENSMUSG00000009075.3	ENSMUST00000009219.3	2628	5	-349	2	-349	-2	multi-exon	FALSE	canonical	3	26	junction_3	5.21416340365355	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGCCCTGGTTCTGT	7215	False	NA	1	True	NA	NA	NA	4697127	4686893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4688949_4689123_4689278_4689553_4689667_4690368_4690513_4696618
Isoform_112832_8	chr2	+	187	1	Intergenic	novelGene_6152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTGCCTGGAGTCATA	NA	False	NA	NA	False	NA	NA	NA	33331364	33331551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_33331400_33331600
Isoform_112846_5	chr2	+	2526	1	Intergenic	novelGene_6153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33346362	33348888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_33346400_33348900
Isoform_112850_6	chr2	-	182	1	Intergenic	novelGene_6154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAATATATTAAAAAAAAA	3849	False	NA	NA	False	NA	NA	NA	33435794	33435612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_33435600_33435800
Isoform_112851_231	chr2	-	172	1	Intergenic	novelGene_5950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAGTCTCTTGCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	5870388	5870216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_5870200_5870400
Isoform_112852_9	chr2	+	178	1	Intergenic	novelGene_6155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	33479715	33479893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_33479700_33479900
Isoform_112855_9	chr2	+	213	1	Intergenic	novelGene_6156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATACATAAATCTCA	NA	False	NA	NA	False	NA	NA	NA	33753817	33754030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_33753800_33754000
Isoform_112856_4	chr2	+	2875	1	Intergenic	novelGene_6157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33771359	33774234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_33771400_33774200
Isoform_112857_42	chr2	+	164	1	Intergenic	novelGene_6158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	33822239	33822403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_33822200_33822400
Isoform_112858_6	chr2	+	4370	1	Genic_Genomic	ENSMUSG00000086904.2	novel	NA	NA	NA	NA	-2291	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCAGTTTTTTGTTTC	NA	False	NA	NA	False	GATAAA	-14	NA	33865966	33870336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_33866000_33870300
Isoform_112859_5	chr2	-	175	1	Intergenic	novelGene_6159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	33876188	33876013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_33876000_33876200
Isoform_11286_30	chr11	-	3023	5	FSM	ENSMUSG00000009075.3	ENSMUST00000009219.3	2628	5	-399	4	-399	-4	multi-exon	FALSE	canonical	3	26	junction_3	5.21416340365355	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTCAGCCCTGGTTCT	7165	False	NA	-1	True	NA	NA	NA	4697177	4686895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4688949_4689123_4689278_4689553_4689667_4690368_4690513_4696618
Isoform_112860_7	chr2	+	1248	1	ISM	ENSMUSG00000025817.13	ENSMUST00000026927.10	4764	10	24550	1079	21434	-1079	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGGGTGGTGTCAAAT	NA	False	NA	4	True	AATAAA	-11	NA	5874379	5875627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_5874400_5875600
Isoform_112862_4	chr2	-	154	1	Intergenic	novelGene_6160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATAAATATATAAATCT	NA	False	NA	NA	False	NA	NA	NA	34079409	34079255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_34079300_34079400
Isoform_112864_19	chr2	+	176	1	Intergenic	novelGene_6161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	34191149	34191325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34191100_34191300
Isoform_112866_4	chr2	+	6444	1	Intergenic	novelGene_6162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGCATAAGGAACTGGAG	NA	False	NA	NA	False	NA	NA	NA	34219972	34226416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34220000_34226400
Isoform_112867_44	chr2	-	177	1	Intergenic	novelGene_6531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	121817210	121817033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_121817000_121817200
Isoform_112868_6	chr2	+	176	1	Intergenic	novelGene_6164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGATTGA	NA	False	NA	NA	False	NA	NA	NA	34290194	34290370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34290200_34290400
Isoform_112869_8	chr2	-	173	1	Intergenic	novelGene_6165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTTCTATCAACACA	5953	False	NA	NA	False	NA	NA	NA	34344667	34344494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_34344500_34344700
Isoform_112870_30	chr2	-	175	1	Intergenic	novelGene_6166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAAATCTA	9938	False	NA	NA	False	NA	NA	NA	34362208	34362033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_34362000_34362200
Isoform_112872_9	chr2	+	168	1	Intergenic	novelGene_6167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	34483332	34483500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34483300_34483500
Isoform_112873_4	chr2	+	237	1	Intergenic	novelGene_6168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTTTGATGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	34500728	34500965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34500700_34501000
Isoform_112875_4	chr2	+	1328	1	Intergenic	novelGene_6169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	34581246	34582574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34581200_34582600
Isoform_112878_29	chr2	+	207	1	Intergenic	novelGene_6170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAAATTTTTAACAGT	8986	False	NA	NA	False	NA	NA	NA	34598639	34598846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34598600_34598800
Isoform_112879_67	chr2	+	152	1	Intergenic	novelGene_6171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAAACGTATTGTTTG	5103	False	NA	NA	False	NA	NA	NA	34613618	34613770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34613600_34613800
Isoform_112881_41	chr2	+	244	1	Intergenic	novelGene_6172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTCCTTCCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	34634168	34634412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34634200_34634400
Isoform_112883_18	chr2	+	192	1	Intergenic	novelGene_6173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACAGCAT	NA	False	NA	NA	False	NA	NA	NA	34634744	34634936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34634700_34634900
Isoform_112884_58	chr2	+	177	1	Intergenic	novelGene_6174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACTC	NA	False	NA	NA	False	NA	NA	NA	34639138	34639315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34639100_34639300
Isoform_112885_21	chr2	+	179	1	Intergenic	novelGene_6175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAAACTTTTCCCACCT	NA	False	NA	NA	False	NA	NA	NA	34656946	34657125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34656900_34657100
Isoform_112890_6	chr2	+	282	1	Intergenic	novelGene_6176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAATAAAGACAA	NA	False	NA	NA	False	NA	NA	NA	34682330	34682612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34682300_34682600
Isoform_112892_17	chr2	-	221	1	Intergenic	novelGene_6177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTCTATGGGAGCTTT	1220	False	NA	NA	False	NA	NA	NA	34691341	34691120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_34691100_34691300
Isoform_112893_181	chr2	-	179	1	Intergenic	novelGene_6178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAGAAGAA	692	False	NA	-40	True	NA	NA	NA	34691869	34691690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_34691700_34691900
Isoform_112894_13	chr2	+	5354	1	Antisense	novelGene_ENSMUSG00000035949.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACAAACCATGAATGTC	NA	False	NA	NA	False	AAGAAA	-43	NA	34692365	34697719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_34692400_34697700
Isoform_112896_65	chr2	+	186	1	Intergenic	novelGene_6179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAATAAACTGCAAAACA	NA	False	NA	NA	False	NA	NA	NA	34708865	34709051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34708900_34709100
Isoform_112898_54	chr11	-	178	1	Intergenic	novelGene_1811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	78028253	78028075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78028100_78028300
Isoform_112899_29	chr2	+	2733	1	Antisense	novelGene_ENSMUSG00000035949.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATCATGGAATGCTCAAC	NA	False	NA	NA	False	NA	NA	NA	34711368	34714101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_34711400_34714100
Isoform_1129_750	SIRV6	+	531	4	FSM	SIRV6A	SIRV616	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_2	7304.14215816386	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
Isoform_112904_16	chr2	-	176	1	Intergenic	novelGene_5951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCTTTAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5950126	5949950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_5950000_5950100
Isoform_112908_148	chr2	+	170	1	Intergenic	novelGene_5952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATCGAGT	757	False	NA	17	True	NA	NA	NA	5952335	5952505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_5952300_5952500
Isoform_112909_4	chr2	+	175	1	Intergenic	novelGene_6181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCCAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	34870608	34870783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34870600_34870800
Isoform_112910_5	chr2	+	1906	1	Intergenic	novelGene_6182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGATTGAGTCTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	34956849	34958755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_34956800_34958800
Isoform_112911_13	chr2	-	183	1	Intergenic	novelGene_6184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGTATATATAAAACTG	NA	False	NA	NA	False	NA	NA	NA	34970021	34969838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_34969800_34970000
Isoform_112913_13	chr2	-	180	1	Intergenic	novelGene_6185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGCTAGTTCA	5693	False	NA	NA	False	NA	NA	NA	35063580	35063400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_35063400_35063600
Isoform_112922_21	chr2	+	2363	1	Intergenic	novelGene_6186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAACAGATCCAGGAA	5433	False	NA	NA	False	NA	NA	NA	35346995	35349358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_35347000_35349400
Isoform_112923_87	chr2	-	198	1	Intergenic	novelGene_6187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCACAGTTGGGGTAGT	NA	False	NA	NA	False	NA	NA	NA	35377796	35377598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_35377600_35377800
Isoform_112926_29	chr2	-	176	1	Intergenic	novelGene_5953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5968845	5968669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_5968700_5968800
Isoform_112929_18	chr2	+	177	1	Intergenic	novelGene_6188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35520941	35521118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_35520900_35521100
Isoform_11294_343	chr11	-	4650	17	FSM	ENSMUSG00000009073.17	ENSMUST00000056290.13	2394	17	-439	-1817	-59	-3	multi-exon	FALSE	canonical	3	247	junction_1	34.4219565648148	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCGTCGAGTTTTTTT	8957	False	NA	-11	True	AATAAA	-18	NA	4799424	4715847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_112944_4	chr2	-	2354	1	NIC	ENSMUSG00000026885.14	novel	1768	4	NA	NA	-25	-74772	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTATGTGATGAGTGTC	4880	False	NA	NA	False	NA	NA	NA	35869803	35867449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_35867400_35869800
Isoform_112947_21	chr2	-	155	1	Intergenic	novelGene_5954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAGAAAAAAGACAAT	NA	False	NA	NA	False	NA	NA	NA	5975561	5975406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_5975400_5975600
Isoform_11295_150	chr11	-	4677	17	FSM	ENSMUSG00000009073.17	ENSMUST00000056290.13	2394	17	-468	-1815	83	-5	multi-exon	FALSE	canonical	3	247	junction_1	34.4219565648148	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTTCGTCGAGTTTTT	8928	False	NA	-13	True	AATAAA	-16	NA	4799453	4715849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_112950_16	chr2	-	170	1	Intergenic	novelGene_6189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37296469	37296299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_37296300_37296500
Isoform_112951_23	chr2	-	171	1	Intergenic	novelGene_6190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCTAC	NA	False	NA	NA	False	NA	NA	NA	37315154	37314983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_37315000_37315200
Isoform_112952_109	chr2	+	206	1	Intergenic	novelGene_6191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTAATATGCTGTC	NA	False	NA	NA	False	NA	NA	NA	37355101	37355307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_37355100_37355300
Isoform_112953_362	chr2	+	174	1	Intergenic	novelGene_6192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCTTGACTGC	NA	False	NA	NA	False	NA	NA	NA	37356825	37356999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_37356800_37357000
Isoform_112954_25	chr2	-	175	1	Intergenic	novelGene_6193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	6113	False	NA	NA	False	NA	NA	NA	37361627	37361452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_37361500_37361600
Isoform_112955_11	chr2	+	1882	1	Intergenic	novelGene_6194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37480860	37482742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_37480900_37482700
Isoform_112956_3	chr2	+	157	1	Intergenic	novelGene_6195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6243	False	NA	NA	False	NA	NA	NA	37511641	37511798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_37511600_37511800
Isoform_112960_22	chr7	-	175	1	Intergenic	novelGene_9808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11109194	11109019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_11109000_11109200
Isoform_112961_8	chr2	-	177	1	Intergenic	novelGene_5955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTAAATAAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	5988774	5988597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_5988600_5988800
Isoform_112962_15	chr2	+	170	1	Intergenic	novelGene_6197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTTTTAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	37627535	37627705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_37627500_37627700
Isoform_112963_6	chr2	+	182	1	Intergenic	novelGene_6198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	37628160	37628342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_37628200_37628300
Isoform_112964_10	chr2	-	188	1	Intergenic	novelGene_6199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	37662509	37662321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_37662300_37662500
Isoform_112969_158	chr7	+	169	1	Intergenic	novelGene_10393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	2886	False	NA	NA	False	NA	NA	NA	128191442	128191611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_128191400_128191600
Isoform_112971_8	chr2	+	3904	1	Intergenic	novelGene_6200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	ATTAAA	-13	NA	37964487	37968391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_37964500_37968400
Isoform_112974_42	chr2	-	177	1	Intergenic	novelGene_6201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	38343492	38343315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_38343300_38343500
Isoform_112976_60	chr2	-	177	1	Intergenic	novelGene_6202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTGTATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	38387492	38387315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_38387300_38387500
Isoform_112978_24	chr6	+	169	1	Intergenic	novelGene_9309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39477856	39478025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39477900_39478000
Isoform_112981_10	chr2	-	177	1	Intergenic	novelGene_6203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	38678632	38678455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_38678500_38678600
Isoform_112982_75	chr2	+	197	1	Intergenic	novelGene_6204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGGAGAATGAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	38740401	38740598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_38740400_38740600
Isoform_112983_3	chr2	+	175	1	Intergenic	novelGene_6205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGAGTACT	NA	False	NA	NA	False	NA	NA	NA	38740974	38741149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_38741000_38741100
Isoform_112984_7	chr2	+	176	1	Intergenic	novelGene_6206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	38758048	38758224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_38758000_38758200
Isoform_112989_5	chr2	+	1366	1	Genic_Genomic	ENSMUSG00000026755.15_ENSMUSG00000035295.11	novel	NA	NA	NA	NA	-34	511	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	38895325	38896691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_38895300_38896700
Isoform_112990_16	chr2	+	176	1	Intergenic	novelGene_5956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6016409	6016585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_6016400_6016600
Isoform_112991_3	chr2	-	493	1	Intergenic	novelGene_6207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAGGTGAGACAT	NA	False	NA	NA	False	ATTAAA	-44	NA	38898010	38897517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_38897500_38898000
Isoform_112996_6	chr2	-	234	1	Intergenic	novelGene_6208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTAATGCT	NA	False	NA	NA	False	AATAAA	-34	NA	38966949	38966715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_38966700_38966900
Isoform_112999_3	chr2	+	180	1	Intergenic	novelGene_6209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGCATTTTTGAC	4000	False	NA	NA	False	NA	NA	NA	39002321	39002501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_39002300_39002500
Isoform_113001_75	chr2	-	423	1	Intergenic	novelGene_6210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40413063	40412640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_40412600_40413100
Isoform_113004_3	chr2	+	565	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1079	314	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	40446842	40447442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_40447295_40447329
Isoform_113005_3	chr2	+	471	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1173	314	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	40446936	40447442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_40447295_40447329
Isoform_113007_6	chr2	+	219	1	FSM	ENSMUSG00000082536.2	ENSMUST00000118928.2	1365	1	1288	-142	1288	142	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTTGTGGACCAT	NA	False	NA	NA	False	AGTAAA	-45	NA	40447051	40447270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_40447100_40447300
Isoform_113011_12	chr2	-	206	1	Intergenic	novelGene_6211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATTAAAATTCTGCAGT	NA	False	NA	NA	False	NA	NA	NA	41373580	41373374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_41373400_41373600
Isoform_113014_8	chr2	+	172	1	Intergenic	novelGene_6212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	41662856	41663028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_41662900_41663000
Isoform_113016_9	chr2	-	401	1	Genic_Genomic	ENSMUSG00000081999.4	novel	NA	NA	NA	NA	1300	344	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	41877541	41877140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_41877100_41877500
Isoform_113018_5	chr2	-	157	1	Intergenic	novelGene_5957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	6041973	6041816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_6041800_6042000
Isoform_11302_14	chr11	-	4437	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	27	-7	combination_of_known_junctions	FALSE	canonical	3	33	junction_14	87.5255899088312	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	9043	False	NA	-15	True	AATAAA	-14	NA	4799338	4715851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
Isoform_113020_11	chr2	-	176	1	Intergenic	novelGene_5958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	6058946	6058770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_6058800_6058900
Isoform_113021_5	chr2	+	181	1	Intergenic	novelGene_6213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAAGTTATTC	NA	False	NA	NA	False	NA	NA	NA	44363110	44363291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_44363100_44363300
Isoform_113024_130	chr2	-	184	1	Intergenic	novelGene_6214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44718511	44718327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_44718300_44718500
Isoform_113028_4	chr2	+	3023	2	NNC	ENSMUSG00000086202.2	novel	424	2	NA	NA	-1	1217	intron_retention	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGGAAAAAAAAAACCCACA	NA	False	NA	NA	False	NA	NA	NA	45586615	45589676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_45587278_45587315
Isoform_11303_11	chr11	-	4556	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	81	-5	combination_of_known_junctions	FALSE	canonical	3	33	junction_14	87.5255899088312	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTTCGTCGAGTTTTT	8926	False	NA	-13	True	AATAAA	-16	NA	4799455	4715849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
Isoform_113030_8	chr2	+	184	1	Intergenic	novelGene_6215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGGAATAG	NA	False	NA	NA	False	NA	NA	NA	46225338	46225522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_46225300_46225500
Isoform_113033_18	chr2	+	200	1	Intergenic	novelGene_6216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCTAAGTTAATCACCAA	NA	False	NA	NA	False	NA	NA	NA	48812009	48812209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_48812000_48812200
Isoform_113035_9	chr2	-	2276	1	Genic_Genomic	ENSMUSG00000082332.3	novel	NA	NA	NA	NA	-113	414	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGCATGTAGATTAAAG	NA	False	NA	NA	False	AATAAA	-25	NA	6138880	6136604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_6136600_6138900
Isoform_113038_11	chr2	+	1735	1	FSM	ENSMUSG00000081272.2	ENSMUST00000119733.2	1308	1	34	-461	34	461	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGATAGTATG	NA	False	NA	NA	False	AATAAA	-12	NA	49198200	49199935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_49198200_49199900
Isoform_11304_36	chr11	-	4504	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-52	-7	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	81.0748351147808	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8964	False	NA	-15	True	AATAAA	-14	NA	4799417	4715851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_113043_3	chr2	-	8379	1	Antisense	novelGene_ENSMUSG00000069495.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAACCAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	49415211	49406832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_49406800_49415200
Isoform_113044_4	chr2	-	2054	1	Antisense	novelGene_ENSMUSG00000069495.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCTGAGTTTTACAT	NA	False	NA	NA	False	CATAAA	-45	NA	49419369	49417315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_49417300_49419400
Isoform_113052_3	chr2	+	175	1	Intergenic	novelGene_6219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAATAAAAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	51248576	51248751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_51248600_51248800
Isoform_113053_15	chr2	-	170	1	Intergenic	novelGene_5959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATCCTTTT	8980	False	NA	NA	False	NA	NA	NA	6314183	6314013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_6314000_6314200
Isoform_113056_7	chr2	+	1003	1	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	2	-3169	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	51962845	51963848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_51962800_51963800
Isoform_11306_33	chr11	-	4554	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	71	-5	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	81.0748351147808	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTTCGTCGAGTTTTT	8916	False	NA	-13	True	AATAAA	-16	NA	4799465	4715849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_113060_3	chr2	+	3215	1	Intergenic	novelGene_6220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTATTTTTGTT	NA	False	NA	12	True	AATAAA	-13	NA	52013565	52016780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_52013600_52016800
Isoform_113061_3	chr2	+	2992	1	Intergenic	novelGene_6221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTGGTGTTTATTTT	NA	False	NA	8	True	AATAAA	-9	NA	52013784	52016776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_52013800_52016800
Isoform_113062_3	chr2	+	2413	1	Intergenic	novelGene_6222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTTATTTTTGT	NA	False	NA	11	True	AATAAA	-12	NA	52014366	52016779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_52014400_52016800
Isoform_113064_24	chr2	-	176	1	Genic_Genomic	ENSMUSG00000026950.19	novel	NA	NA	NA	NA	-140	2044	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTTAATAA	NA	False	NA	NA	False	NA	NA	NA	52066189	52066013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_52066000_52066200
Isoform_113072_56	chr2	+	174	1	Intergenic	novelGene_6223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAAGTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	52542165	52542339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_52542200_52542300
Isoform_113073_11	chr5	+	170	1	Intergenic	novelGene_8478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAATCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36969645	36969815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_36969600_36969800
Isoform_113075_17	chr2	+	177	1	Intergenic	novelGene_6224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTAAAGCTTCACTC	NA	False	NA	NA	False	NA	NA	NA	52680871	52681048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_52680900_52681000
Isoform_113078_3	chr2	-	3071	1	Intergenic	novelGene_6225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAAGGAAAAGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	52758246	52755175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_52755200_52758200
Isoform_113080_34	chr2	-	166	1	Intergenic	novelGene_6227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	52955447	52955281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_52955300_52955400
Isoform_113084_3	chr2	-	160	1	Intergenic	novelGene_6228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	53438538	53438378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_53438400_53438500
Isoform_113085_120	chr2	-	2491	1	FSM	ENSMUSG00000083287.5	ENSMUST00000121574.2	684	1	-52	-1755	-52	1755	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	53586868	53584377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_53584400_53586900
Isoform_113087_4	chr2	+	177	1	Intergenic	novelGene_6229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	53735515	53735692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_53735500_53735700
Isoform_113088_16	chr2	+	177	1	Intergenic	novelGene_6230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCTCAAACATGA	NA	False	NA	NA	False	NA	NA	NA	53860479	53860656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_53860500_53860700
Isoform_113089_4	chr2	+	175	1	Intergenic	novelGene_6231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	55083815	55083990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_55083800_55084000
Isoform_113090_7	chr2	-	4178	2	Intergenic	novelGene_6232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTTTGTTGCGTC	NA	False	NA	NA	False	NA	NA	NA	55958969	55954769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_55956101_55956122
Isoform_113091_21	chr2	+	164	1	Intergenic	novelGene_6233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	56853130	56853294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_56853100_56853300
Isoform_113093_5	chr2	-	799	1	Genic_Genomic	ENSMUSG00000026826.14	novel	NA	NA	NA	NA	-137	-10352	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTAATTGTGAAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	57014152	57013353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_57013400_57014200
Isoform_113094_4	chr2	-	216	1	Intergenic	novelGene_6234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAAGGATCTGTGGGGTA	NA	False	NA	NA	False	NA	NA	NA	57042580	57042364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_57042400_57042600
Isoform_113095_14	chr2	-	177	1	Intergenic	novelGene_6235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAGACTGTTGA	4464	False	NA	NA	False	NA	NA	NA	57119675	57119498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_57119500_57119700
Isoform_11310_103	chr11	-	4592	16	FSM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	125	3	-46	-3	multi-exon	TRUE	canonical	3	105	junction_1	67.5504749551524	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCGTCGAGTTTTTTT	8970	False	NA	-11	True	AATAAA	-18	NA	4799411	4715847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_113102_17	chr2	+	153	1	Intergenic	novelGene_5960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGTAATAATCCA	NA	False	NA	NA	False	NA	NA	NA	6756887	6757040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_6756900_6757000
Isoform_113103_4	chr2	-	174	1	Intergenic	novelGene_6236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAAAATTTTTTG	NA	False	NA	NA	False	NA	NA	NA	58507129	58506955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_58507000_58507100
Isoform_113104_6	chr2	-	175	1	Intergenic	novelGene_6237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAATAG	NA	False	NA	NA	False	NA	NA	NA	58514253	58514078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_58514100_58514300
Isoform_113105_5	chr2	-	5146	1	Intergenic	novelGene_6238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGCACTATCCAAATCTT	NA	False	NA	NA	False	NA	NA	NA	58997711	58992565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_58992600_58997700
Isoform_113107_4	chr2	+	178	1	Intergenic	novelGene_6239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGTAGTCAAG	NA	False	NA	NA	False	NA	NA	NA	59203265	59203443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_59203300_59203400
Isoform_113108_5	chr2	+	172	1	Intergenic	novelGene_6240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCTAAGCAAGCTAGACT	3456	False	NA	NA	False	NA	NA	NA	59242460	59242632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_59242500_59242600
Isoform_113109_82	chr2	+	176	1	Intergenic	novelGene_6241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	59414963	59415139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_59415000_59415100
Isoform_113111_5	chr2	+	237	1	Intergenic	novelGene_6242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTTATAGTATTTCAGA	NA	False	NA	NA	False	NA	NA	NA	59440566	59440803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_59440600_59440800
Isoform_113112_5	chr2	-	200	1	Intergenic	novelGene_6243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATAACAACAGAAAATGC	NA	False	NA	NA	False	NA	NA	NA	59564728	59564528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_59564500_59564700
Isoform_113114_24	chr2	+	176	1	Intergenic	novelGene_6244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59571192	59571368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_59571200_59571400
Isoform_113115_10	chr2	+	197	1	Intergenic	novelGene_5962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGAGAGAAAGGATTGT	NA	False	NA	NA	False	NA	NA	NA	7780528	7780725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_7780500_7780700
Isoform_113116_3	chr2	-	1915	1	Intergenic	novelGene_6245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGACAACTCCTTG	NA	False	NA	NA	False	NA	NA	NA	59619568	59617653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_59617700_59619600
Isoform_113119_10	chr2	+	180	1	Intergenic	novelGene_6246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGAACTAGCCG	NA	False	NA	NA	False	NA	NA	NA	59682202	59682382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_59682200_59682400
Isoform_11312_66	chr11	-	4630	16	FSM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	83	7	83	-7	multi-exon	FALSE	canonical	3	105	junction_1	67.5504749551524	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8928	False	NA	-15	True	AATAAA	-14	NA	4799453	4715851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_113120_23	chr2	-	177	1	Intergenic	novelGene_6247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTACT	NA	False	NA	NA	False	NA	NA	NA	59777447	59777270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_59777300_59777400
Isoform_113121_12	chr2	+	155	1	Intergenic	novelGene_6248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1263	False	NA	NA	False	NA	NA	NA	59813290	59813445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_59813300_59813400
Isoform_113122_31	chr2	-	174	1	Intergenic	novelGene_6249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATATACA	NA	False	NA	NA	False	NA	NA	NA	59847579	59847405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_59847400_59847600
Isoform_113123_71	chr2	+	210	1	Intergenic	novelGene_5963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTGGGGGTCACCACA	NA	False	NA	NA	False	NA	NA	NA	9905055	9905265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_9905100_9905300
Isoform_113126_7	chr2	+	158	1	Intergenic	novelGene_6446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	3641	False	NA	NA	False	NA	NA	NA	102291027	102291185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_102291000_102291200
Isoform_113127_40	chr2	-	175	1	Intergenic	novelGene_6251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	3297	False	NA	NA	False	NA	NA	NA	60007268	60007093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_60007100_60007300
Isoform_113128_6	chr2	+	176	1	Intergenic	novelGene_6252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAATACAGATGAAAT	NA	False	NA	NA	False	NA	NA	NA	60009075	60009251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_60009100_60009300
Isoform_113130_9	chr2	-	3230	2	NNC	ENSMUSG00000026987.17	novel	509	2	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTAATTGACTTCTGC	9107	False	NA	NA	False	AATAAA	-17	NA	60040188	60036936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_60039192_60039213
Isoform_113133_9	chr2	+	159	1	Intergenic	novelGene_5964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAAAATTCT	2849	False	NA	NA	False	NA	NA	NA	9909136	9909295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_9909100_9909300
Isoform_113141_57	chr2	-	176	1	Intergenic	novelGene_6253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATATAAAGAACATT	9149	False	NA	0	True	NA	NA	NA	60244409	60244233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_60244200_60244400
Isoform_113142_778	chr17	-	178	1	Intergenic	novelGene_5184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	778	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAACCTGT	NA	False	NA	NA	False	NA	NA	NA	83813236	83813058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_83813100_83813200
Isoform_113143_7	chr2	+	160	1	Intergenic	novelGene_6255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCCTTTTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	60500907	60501067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_60500900_60501100
Isoform_113146_5	chr2	-	1725	1	ISM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	211274	1	10403	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTCCTGTCGGTTTTTT	NA	False	NA	-1	True	AATAAA	-16	NA	60582262	60580537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_60580500_60582300
Isoform_113147_5	chr2	+	285	1	Intergenic	novelGene_6256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60665511	60665796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_60665500_60665800
Isoform_113148_4	chr2	-	5539	1	NIC	ENSMUSG00000026970.17	novel	1806	15	NA	NA	7	12287	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCACGG	NA	False	NA	NA	False	NA	NA	NA	60711807	60706268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_60706300_60711800
Isoform_113153_4	chr13	+	405	1	Intergenic	novelGene_3203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	3136	False	NA	NA	False	NA	NA	NA	75970908	75971313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_75970900_75971300
Isoform_113154_5	chr14	-	343	1	Intergenic	novelGene_3725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGACCGTTTTCTCGTTA	NA	False	NA	NA	False	NA	NA	NA	119340595	119340252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_119340300_119340600
Isoform_113156_22	chr2	-	177	1	Intergenic	novelGene_6258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61838849	61838672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_61838700_61838800
Isoform_113159_11	chr2	+	176	1	Intergenic	novelGene_6259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGTTCTTTGCAAC	NA	False	NA	NA	False	NA	NA	NA	62183572	62183748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_62183600_62183700
Isoform_11316_10	chr11	-	4508	15	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	70	-7	combination_of_known_junctions	FALSE	canonical	3	63	junction_8	100.950306020905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8915	False	NA	-15	True	AATAAA	-14	NA	4799466	4715851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_113160_24	chr2	+	208	1	Intergenic	novelGene_6260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTAACA	NA	False	NA	NA	False	NA	NA	NA	62188540	62188748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_62188500_62188700
Isoform_113165_440	chr7	-	177	1	Intergenic	novelGene_9851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	440	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2173	False	NA	NA	False	NA	NA	NA	18923608	18923431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_18923400_18923600
Isoform_113166_3	chr2	-	605	1	FSM	ENSMUSG00000082127.3	ENSMUST00000121365.3	205	1	108	-508	108	508	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGGAAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	64305185	64304580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_64304600_64305200
Isoform_113168_21	chr2	+	343	2	Antisense	novelGene_ENSMUSG00000061171.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAAAAAAATCCTTT	NA	False	NA	NA	False	NA	NA	NA	65150283	65150646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_65150541_65150560
Isoform_113171_5	chr2	+	177	1	Intergenic	novelGene_6263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAAACCCTGG	NA	False	NA	NA	False	NA	NA	NA	65487769	65487946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_65487800_65487900
Isoform_113173_10	chr2	-	175	1	Intergenic	novelGene_6264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGAGAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	65745119	65744944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_65744900_65745100
Isoform_113176_10	chr2	+	196	1	Intergenic	novelGene_6265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATAGCTCTCTGGAAAA	NA	False	NA	NA	False	NA	NA	NA	66466271	66466467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_66466300_66466500
Isoform_113177_217	chr2	-	176	1	Intergenic	novelGene_6266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGGCAGCAA	NA	False	NA	NA	False	NA	NA	NA	66618766	66618590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_66618600_66618800
Isoform_113178_8	chr2	+	179	1	Intergenic	novelGene_5965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGGAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10036287	10036466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_10036300_10036500
Isoform_113179_7	chr2	-	181	1	Intergenic	novelGene_6267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAGAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	66620948	66620767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_66620800_66620900
Isoform_113180_204	chr2	-	168	1	Intergenic	novelGene_6268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGGTTT	NA	False	NA	NA	False	NA	NA	NA	66988551	66988383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_66988400_66988600
Isoform_113182_20	chr2	+	1278	1	FSM	ENSMUSG00000075312.5	ENSMUST00000121239.2	375	1	-53	-850	-53	850	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGGTTTAATAAGTC	NA	False	NA	NA	False	AATAAA	-44	NA	68384845	68386123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_68384800_68386100
Isoform_113183_3	chr2	-	172	1	Intergenic	novelGene_6270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAGAAAGCA	NA	False	NA	NA	False	NA	NA	NA	68633822	68633650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_68633600_68633800
Isoform_113184_5	chr2	+	173	1	Intergenic	novelGene_6271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGGCTTCCAA	NA	False	NA	NA	False	NA	NA	NA	68643523	68643696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_68643500_68643700
Isoform_113187_14	chr2	+	446	1	Intergenic	novelGene_6272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGGTTTTAGGGCTTT	3278	False	NA	NA	False	ACTAAA	-11	NA	69026278	69026724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69026300_69026700
Isoform_113188_12	chr2	-	177	1	Intergenic	novelGene_6273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69038584	69038407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69038400_69038600
Isoform_113189_73	chr7	+	204	1	Intergenic	novelGene_10006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTCTAATGGATGGACA	NA	False	NA	NA	False	TTTAAA	-5	NA	41702242	41702446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_41702200_41702400
Isoform_113190_44	chr2	+	177	1	Intergenic	novelGene_6275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATGCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69431529	69431706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69431500_69431700
Isoform_113191_3	chr2	+	182	1	Intergenic	novelGene_6276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTAAAAAAAAAAAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	69435727	69435909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69435700_69435900
Isoform_113192_78	chr2	+	201	1	Intergenic	novelGene_6277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGAGGATCAGTTTG	NA	False	NA	NA	False	NA	NA	NA	69468587	69468788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69468600_69468800
Isoform_113193_92	chr2	+	253	1	Intergenic	novelGene_6278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGGTGAGCATGGTGG	NA	False	NA	NA	False	NA	NA	NA	69476058	69476311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69476100_69476300
Isoform_113196_7	chr2	+	208	1	Intergenic	novelGene_6279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCAATGCTGGGAAGAC	NA	False	NA	NA	False	AAGAAA	-12	NA	69489254	69489462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69489300_69489500
Isoform_1132_873	SIRV6	+	458	5	FSM	SIRV6A	SIRV614	459	5	1	0	1	0	multi-exon	FALSE	canonical	3	2976	junction_3	7392.30118095847	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2517	10815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
Isoform_113201_6	chr2	+	1079	1	Intergenic	novelGene_6280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGAACAAAAACAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	69522260	69523339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69522300_69523300
Isoform_113203_3	chr2	-	170	1	Intergenic	novelGene_6281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTTTCTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	69536879	69536709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69536700_69536900
Isoform_113206_50	chr2	-	2056	1	FSM	ENSMUSG00000082345.2	ENSMUST00000120658.2	433	1	-1592	-31	-1592	31	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	69569725	69567669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_69567700_69569700
Isoform_113207_44	chr2	+	171	1	Intergenic	novelGene_6282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCATT	NA	False	NA	NA	False	NA	NA	NA	69573056	69573227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69573100_69573200
Isoform_113215_95	chr2	+	176	1	Intergenic	novelGene_6283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGAACTCAAT	NA	False	NA	NA	False	NA	NA	NA	69657379	69657555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69657400_69657600
Isoform_113217_98	chr2	+	175	1	Intergenic	novelGene_6284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	69667469	69667644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69667500_69667600
Isoform_113225_90	chr2	-	177	1	Intergenic	novelGene_6285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69738202	69738025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69738000_69738200
Isoform_113227_61	chr2	-	179	1	Intergenic	novelGene_6286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGTCATAGTAAAAC	NA	False	NA	-6	True	NA	NA	NA	69741369	69741190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69741200_69741400
Isoform_113228_7	chr2	-	175	1	Intergenic	novelGene_6287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCTGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	69745727	69745552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69745600_69745700
Isoform_113229_545	chr12	-	177	1	Intergenic	novelGene_2517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	545	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40629482	40629305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_40629300_40629500
Isoform_11323_17	chr11	-	2424	15	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-59	9608	-59	-5	5prime_fragment	FALSE	canonical	3	334	junction_11	18.239338512889	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAAGGGGACTTATGCC	8957	False	NA	NA	False	AATAAA	-16	NA	4799424	4731941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_113231_6	chr2	-	483	1	Intergenic	novelGene_6289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69760924	69760441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69760400_69760900
Isoform_113232_3	chr2	-	167	1	Intergenic	novelGene_6290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAGAAAAAAAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	69767699	69767532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69767500_69767700
Isoform_113233_10	chr2	-	179	1	Intergenic	novelGene_6291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAGAAAAAAAAAAGTAAG	7115	False	NA	NA	False	NA	NA	NA	69792572	69792393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69792400_69792600
Isoform_113234_53	chr2	-	173	1	Intergenic	novelGene_6292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69874041	69873868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69873900_69874000
Isoform_113236_13	chr2	+	222	1	Intergenic	novelGene_6293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAACAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70244127	70244349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_70244100_70244300
Isoform_113241_16	chr2	+	177	1	Intergenic	novelGene_5966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTGAGGAT	NA	False	NA	NA	False	NA	NA	NA	10310343	10310520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_10310300_10310500
Isoform_113242_8	chr2	+	211	1	Intergenic	novelGene_6294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAGTTGCATAGGCAC	NA	False	NA	NA	False	NA	NA	NA	70348546	70348757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_70348500_70348800
Isoform_113243_33	chr2	+	175	1	Intergenic	novelGene_6295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAACCTTAA	3463	False	NA	NA	False	NA	NA	NA	70462413	70462588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_70462400_70462600
Isoform_113244_8	chr2	-	160	1	Intergenic	novelGene_6296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATATTTTAA	NA	False	NA	NA	False	NA	NA	NA	70484801	70484641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_70484600_70484800
Isoform_113246_13	chr2	+	176	1	Intergenic	novelGene_6297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAGCCTATGG	NA	False	NA	NA	False	NA	NA	NA	70530590	70530766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_70530600_70530800
Isoform_113247_9	chr2	-	177	1	Intergenic	novelGene_6298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	70554969	70554792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_70554800_70555000
Isoform_113251_4	chr2	+	252	1	Intergenic	novelGene_6299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACCTCTGTTGTTGCA	NA	False	NA	NA	False	GGGGCT	-7	NA	70638291	70638543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_70638300_70638500
Isoform_113252_9	chr2	+	1019	1	Intergenic	novelGene_6300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	70654019	70655038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_70654000_70655000
Isoform_113255_6	chr2	+	2477	1	Intergenic	novelGene_6301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACCACCACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70872875	70875352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_70872900_70875400
Isoform_113256_10	chr2	+	636	1	Genic_Genomic	ENSMUSG00000041966.19	novel	NA	NA	NA	NA	-9	-21775	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	ACTAAA	-25	NA	70886078	70886714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_70886100_70886700
Isoform_113257_3	chr2	-	2476	1	Intergenic	novelGene_6302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70890340	70887864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_70887900_70890300
Isoform_113259_42	chr2	+	163	1	Intergenic	novelGene_6303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATAGC	NA	False	NA	NA	False	NA	NA	NA	70997934	70998097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_70997900_70998100
Isoform_113260_4	chr2	-	187	1	Intergenic	novelGene_6304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTAATTTAAGCAGGGC	3324	False	NA	NA	False	NA	NA	NA	71041653	71041466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_71041500_71041700
Isoform_113261_66	chr2	+	210	1	ISM	ENSMUSG00000027012.16	ENSMUST00000149735.2	2248	4	18115	213	-4680	-213	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGAGGGGTGGTTCC	4689	False	NA	NA	False	AATAAA	-6	NA	71060462	71060672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_71060500_71060700
Isoform_113264_5	chr2	+	2887	1	Antisense	novelGene_ENSMUSG00000027010.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATATTTAAGATACCT	NA	False	NA	NA	False	ACTAAA	-12	NA	71140821	71143708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_71140800_71143700
Isoform_113265_20	chr2	+	175	1	Intergenic	novelGene_6305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAGAAACTAT	NA	False	NA	NA	False	NA	NA	NA	71156640	71156815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_71156600_71156800
Isoform_113266_3	chr2	-	4130	1	Intergenic	novelGene_5967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	10370044	10365914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_10365900_10370000
Isoform_113267_23	chr2	+	1449	1	Intergenic	novelGene_6306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAAACTTCCATTCT	NA	False	NA	NA	False	AAAAAG	-13	NA	71178306	71179755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_71178300_71179800
Isoform_113271_5	chr2	+	173	1	Intergenic	novelGene_6307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTTAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	71194221	71194394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_71194200_71194400
Isoform_113274_198	chr2	+	180	1	Intergenic	novelGene_6308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAATGATA	2029	False	NA	NA	False	NA	NA	NA	71216514	71216694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_71216500_71216700
Isoform_113280_3	chr2	-	177	1	Intergenic	novelGene_6310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTGCTCTAATCAAA	NA	False	NA	NA	False	NA	NA	NA	71596941	71596764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_71596800_71596900
Isoform_113281_13	chr2	-	180	1	Intergenic	novelGene_6311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAATAAAATG	NA	False	NA	NA	False	NA	NA	NA	71629491	71629311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_71629300_71629500
Isoform_113288_7	chr2	+	424	1	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	-9866	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTACA	NA	False	NA	NA	False	NA	NA	NA	71703661	71704085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_71703700_71704100
Isoform_113289_5	chr2	-	1937	1	Antisense	novelGene_ENSMUSG00000006494.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGGAACCCTAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	71726126	71724189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_71724200_71726100
Isoform_113291_25	chr2	+	165	1	Intergenic	novelGene_6312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	9724	False	NA	NA	False	NA	NA	NA	71755566	71755731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_71755600_71755700
Isoform_113292_22	chr2	-	176	1	Intergenic	novelGene_6313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTCCTAACC	NA	False	NA	NA	False	NA	NA	NA	71793791	71793615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_71793600_71793800
Isoform_113293_7	chr2	+	175	1	Intergenic	novelGene_6314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAAAAGAATAGTG	NA	False	NA	NA	False	NA	NA	NA	71903188	71903363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_71903200_71903400
Isoform_113294_49	chr15	+	178	1	Intergenic	novelGene_3886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55112181	55112359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_55112200_55112400
Isoform_1133_756	SIRV6	+	545	4	FSM	SIRV6A	SIRV606	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	12902	junction_1	3352.72986617705	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
Isoform_113301_7	chr2	+	1637	1	FSM	ENSMUSG00000081957.6	ENSMUST00000120282.2	672	1	-88	-877	-88	877	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTAAATGTTTTTAACT	NA	False	NA	NA	False	AAGAAA	-32	NA	72464191	72465828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_72464200_72465800
Isoform_113302_15	chr2	+	172	1	Intergenic	novelGene_6316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAATTAATTTG	NA	False	NA	NA	False	NA	NA	NA	72495796	72495968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_72495800_72496000
Isoform_113305_26	chr2	-	184	1	Intergenic	novelGene_6318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATTAATTAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	72756170	72755986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_72756000_72756200
Isoform_113306_3	chr2	+	174	1	Intergenic	novelGene_6319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTGGGAATATATAAAAT	NA	False	NA	NA	False	NA	NA	NA	72775236	72775410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_72775200_72775400
Isoform_113307_9	chr2	-	165	1	Intergenic	novelGene_6320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	72825217	72825052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_72825100_72825200
Isoform_113308_8	chr2	-	171	1	Intergenic	novelGene_6321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	72857100	72856929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_72856900_72857100
Isoform_113310_4	chr2	+	175	1	Intergenic	novelGene_6322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	72924610	72924785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_72924600_72924800
Isoform_113311_4	chr2	+	1964	1	FSM	ENSMUSG00000082455.4	ENSMUST00000120830.2	528	1	-1407	-29	-1407	29	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	72945684	72947648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_72945700_72947600
Isoform_113312_45	chr2	-	154	1	Intergenic	novelGene_6323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73087470	73087316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_73087300_73087500
Isoform_113313_4	chr2	+	2461	1	NIC	ENSMUSG00000008226.15	novel	3309	8	NA	NA	-2	-684	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73143000	73145461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_73143000_73145500
Isoform_113314_34	chr2	+	183	1	Intergenic	novelGene_6324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAGTTGATAACTTTT	NA	False	NA	NA	False	NA	NA	NA	73164925	73165108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_73164900_73165100
Isoform_113315_4	chr2	+	876	1	Genic_Genomic	ENSMUSG00000087176.2	novel	NA	NA	NA	NA	-83	-32736	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73217230	73218106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_73217200_73218100
Isoform_113320_6	chr2	-	192	1	Intergenic	novelGene_6325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTATTTGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	73561877	73561685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_73561700_73561900
Isoform_113321_5	chr2	-	176	1	Intergenic	novelGene_6326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATAAGACTT	227	False	NA	NA	False	NA	NA	NA	73625510	73625334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_73625300_73625500
Isoform_113324_5	chr2	+	2566	1	Intergenic	novelGene_6327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73653897	73656463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_73653900_73656500
Isoform_113325_162	chr2	+	184	1	Intergenic	novelGene_6328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAGA	NA	False	NA	NA	False	NA	NA	NA	73668453	73668637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_73668500_73668600
Isoform_113326_27	chr2	+	185	1	Intergenic	novelGene_6329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATAGGT	NA	False	NA	NA	False	NA	NA	NA	73727484	73727669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_73727500_73727700
Isoform_113327_13	chr2	-	175	1	Intergenic	novelGene_6330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGAATTAATGA	NA	False	NA	NA	False	NA	NA	NA	73732803	73732628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_73732600_73732800
Isoform_11333_29	chr11	-	3918	4	FSM	ENSMUSG00000020396.9	ENSMUST00000093369.5	3994	4	68	8	68	-8	multi-exon	FALSE	canonical	3	23	junction_2	3.09120616516523	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAACTGTGGTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	4897996	4888761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_4891416_4893850_4893976_4895110_4895311_4897057
Isoform_113340_70	chr2	-	176	1	Intergenic	novelGene_6331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74616736	74616560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_74616600_74616700
Isoform_113341_3	chr2	+	197	1	Intergenic	novelGene_5935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGTGAATTTA	3525	False	NA	NA	False	AATAAA	-10	NA	3478704	3478901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_3478700_3478900
Isoform_113346_19	chr2	-	419	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	399	-68	399	68	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAATGTGTCAAATG	NA	False	NA	NA	False	NA	NA	NA	75021767	75021348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_75021300_75021800
Isoform_113352_5	chr2	-	543	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	-29	236	-29	-236	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACCCAAGATTCAGCGA	NA	False	NA	NA	False	NA	NA	NA	75022195	75021652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_75021700_75022200
Isoform_113353_3	chr2	-	198	1	Intergenic	novelGene_6332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATTTAGAAAATATATT	NA	False	NA	NA	False	NA	NA	NA	75230221	75230023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75230000_75230200
Isoform_113354_23	chr2	-	176	1	Intergenic	novelGene_6333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAACCCTGGA	NA	False	NA	NA	False	NA	NA	NA	75399642	75399466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75399500_75399600
Isoform_113355_42	chr2	+	174	1	Intergenic	novelGene_6334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGTTCTCAACTT	NA	False	NA	2	True	NA	NA	NA	75432787	75432961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_75432800_75433000
Isoform_113356_35	chr2	+	174	1	Intergenic	novelGene_6336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAGCTCACA	NA	False	NA	NA	False	NA	NA	NA	75446314	75446488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_75446300_75446500
Isoform_113358_3	chr2	+	742	1	Intergenic	novelGene_6339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCGTCTGTTCGTGA	NA	False	NA	NA	False	NA	NA	NA	75464378	75465120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_75464400_75465100
Isoform_113359_18	chr2	-	178	1	Intergenic	novelGene_6340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCTAG	2436	False	NA	NA	False	NA	NA	NA	75465382	75465204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75465200_75465400
Isoform_113360_39	chr2	+	150	1	Intergenic	novelGene_6341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAATTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	75467482	75467632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_75467500_75467600
Isoform_113361_4	chr16	-	344	1	Intergenic	novelGene_4625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGTAGTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	94043091	94042747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_94042700_94043100
Isoform_113365_3	chr2	-	252	1	Intergenic	novelGene_6343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTGTTCTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	75503660	75503408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75503400_75503700
Isoform_113369_8	chr2	+	171	1	Intergenic	novelGene_5968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAAGCTAGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	11311727	11311898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_11311700_11311900
Isoform_113372_8	chr2	-	186	1	Intergenic	novelGene_6344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGACATCCCAGAAGTC	NA	False	NA	NA	False	NA	NA	NA	75596352	75596166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75596200_75596400
Isoform_113373_3	chr2	-	155	1	Antisense	novelGene_ENSMUSG00000086813.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75609364	75609209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_75609200_75609400
Isoform_113374_3	chr2	-	165	1	Intergenic	novelGene_5969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGGTTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	11375636	11375471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_11375500_11375600
Isoform_113375_3	chr2	-	179	1	Intergenic	novelGene_6345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCATAATTTGA	NA	False	NA	NA	False	NA	NA	NA	75622190	75622011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75622000_75622200
Isoform_113376_3	chr2	-	214	1	Intergenic	novelGene_6346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTCAAATCTGAAAGCT	9850	False	NA	NA	False	NA	NA	NA	75624007	75623793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75623800_75624000
Isoform_113377_19	chr2	-	174	1	Intergenic	novelGene_6347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAAGGAAGCTA	NA	False	NA	NA	False	NA	NA	NA	75643879	75643705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75643700_75643900
Isoform_113378_6	chr2	-	157	1	Intergenic	novelGene_6348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAAAATTTTTTT	6991	False	NA	NA	False	NA	NA	NA	75678522	75678365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_75678400_75678500
Isoform_113384_29	chr2	+	209	1	Intergenic	novelGene_6349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAAGA	7986	False	NA	NA	False	NA	NA	NA	75691191	75691400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_75691200_75691400
Isoform_11340_8	chr11	-	3327	5	ISM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	-7	5	-7	4	intron_retention	FALSE	canonical	3	136	junction_3	19.9546360528074	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGCATTTGTTTTT	NA	False	NA	-5	True	AAGAAA	-20	NA	5015334	5010376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825
Isoform_113403_25	chr2	-	2559	1	FSM	ENSMUSG00000075273.5	ENSMUST00000099996.5	2737	1	165	13	165	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAGAAACCTCTGC	NA	False	NA	NA	False	NA	NA	NA	75768764	75766205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_75766200_75768800
Isoform_113404_55	chr2	-	2635	1	FSM	ENSMUSG00000075271.5	ENSMUST00000099994.5	3721	1	215	871	215	-871	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTACTGTTCATAATTG	NA	False	NA	-12	True	AATAAA	-19	NA	75812096	75809461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_75809500_75812100
Isoform_113406_7	chr2	-	842	1	Genic_Genomic	ENSMUSG00000056436.5	novel	NA	NA	NA	NA	-10	-5677	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76190804	76189962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_76190000_76190800
Isoform_113407_8	chr2	+	175	1	Intergenic	novelGene_6350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGAATCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	76196482	76196657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_76196500_76196700
Isoform_113408_8	chr2	+	917	1	NIC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	5	-12863	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTACAGCACCA	NA	False	NA	NA	False	NA	NA	NA	76200332	76201249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_76200300_76201200
Isoform_11341_8	chr11	-	3187	5	ISM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	11	127	11	-29	intron_retention	FALSE	canonical	3	136	junction_3	19.9546360528074	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGGACTGAGCC	NA	False	NA	-12	True	AGTAAA	-17	NA	5015316	5010498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825
Isoform_113411_6	chr2	-	176	1	Intergenic	novelGene_6351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATCAATGCATA	NA	False	NA	NA	False	NA	NA	NA	76441971	76441795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_76441800_76442000
Isoform_113412_21	chr2	+	175	1	Intergenic	novelGene_5970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGGGAAGAAAAAAAGA	3284	False	NA	NA	False	NA	NA	NA	11525369	11525544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_11525400_11525500
Isoform_113413_25	chr2	-	177	1	Intergenic	novelGene_6352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGAGGGC	6554	False	NA	NA	False	NA	NA	NA	76931854	76931677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_76931700_76931900
Isoform_113414_3	chr2	+	199	1	Intergenic	novelGene_6353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTATTGCAGTTTCTCACA	NA	False	NA	NA	False	NA	NA	NA	77145967	77146166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_77146000_77146200
Isoform_113416_21	chr2	-	180	1	Intergenic	novelGene_6354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATGAGAGTACGTGA	NA	False	NA	NA	False	NA	NA	NA	77361347	77361167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_77361200_77361300
Isoform_113417_10	chr2	+	175	1	Intergenic	novelGene_6355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATATATGTGAATGTC	NA	False	NA	NA	False	NA	NA	NA	77519937	77520112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_77519900_77520100
Isoform_113419_43	chr2	-	177	1	Intergenic	novelGene_6356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGAGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	78579181	78579004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_78579000_78579200
Isoform_113420_41	chr2	+	194	1	Intergenic	novelGene_6357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCAAGAGCACAAGGAG	NA	False	NA	NA	False	NA	NA	NA	78954909	78955103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_78954900_78955100
Isoform_113422_4	chr2	+	177	1	Intergenic	novelGene_6358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAATGTGAGATGATT	NA	False	NA	NA	False	NA	NA	NA	79871328	79871505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_79871300_79871500
Isoform_113427_4	chr2	+	176	1	Intergenic	novelGene_6359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	80398473	80398649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_80398500_80398600
Isoform_113428_92	chr2	+	232	1	Intergenic	novelGene_6360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAAGAAAATTAATATCT	NA	False	NA	NA	False	NA	NA	NA	80482353	80482585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_80482400_80482600
Isoform_113429_6	chr8	-	158	1	Intergenic	novelGene_10472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAGTAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	3535189	3535031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_3535000_3535200
Isoform_11343_54	chr11	-	2831	7	FSM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	15	1	-12	-1	multi-exon	FALSE	canonical	3	21	junction_5	62.4357447478784	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTTGTTTTTATTA	NA	False	NA	-1	True	AAGAAA	-24	NA	5015312	5010372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5014836_5015095_5015214
Isoform_113431_378	chr2	+	1665	1	FSM	ENSMUSG00000064193.9	ENSMUST00000138679.2	1302	1	-43	-320	-43	320	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATATTTTCTA	NA	False	NA	-5	True	AATAAA	-15	NA	80667441	80669106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_80667400_80669100
Isoform_11345_189	chr11	-	2573	6	FSM	ENSMUSG00000034201.14	ENSMUST00000109895.2	2530	6	-35	-8	-12	-1	multi-exon	FALSE	canonical	3	85	junction_5	36.2049720342386	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTTGTTTTTATTA	NA	False	NA	-1	True	AAGAAA	-24	NA	5015312	5010372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
Isoform_113452_3	chr2	-	173	1	Intergenic	novelGene_5971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAGGGAAAGA	8482	False	NA	NA	False	NA	NA	NA	11643016	11642843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_11642800_11643000
Isoform_113453_3	chr2	+	172	1	Intergenic	novelGene_6361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAATAAATAAGAATA	NA	False	NA	25	True	NA	NA	NA	83451433	83451605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_83451400_83451600
Isoform_113457_108	chr2	-	177	1	Intergenic	novelGene_6362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAGTCACACTGT	NA	False	NA	NA	False	NA	NA	NA	83524404	83524227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_83524200_83524400
Isoform_113458_8	chr2	-	230	1	Intergenic	novelGene_6363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGCTAATTTCCCACAG	NA	False	NA	NA	False	TATAAA	-11	NA	83538284	83538054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_83538100_83538300
Isoform_113460_14	chr2	-	178	1	Intergenic	novelGene_6364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAGAAATGAA	NA	False	NA	NA	False	NA	NA	NA	83546465	83546287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_83546300_83546500
Isoform_113461_10	chr2	+	175	1	Intergenic	novelGene_6365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAACCTATT	NA	False	NA	NA	False	NA	NA	NA	83547698	83547873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_83547700_83547900
Isoform_113462_3	chr2	-	2311	1	Antisense	novelGene_ENSMUSG00000027087.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATTCCAAGTCTGGA	NA	False	NA	NA	False	AATACA	-12	NA	83555278	83552967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_83553000_83555300
Isoform_113466_5	chr2	+	3074	2	NNC	ENSMUSG00000094336.2	novel	732	2	NA	NA	-784	472	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGGATGACAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	83791062	83794811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_83791084_83791758
Isoform_113468_5	chr2	+	3053	1	FSM	ENSMUSG00000096484.2	ENSMUST00000180347.2	2493	1	-88	-472	-88	472	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGGATGACAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	83803378	83806431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83803400_83806400
Isoform_11347_122	chr11	-	3188	6	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	54	junction_5	47.3894503027836	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCATTTGTTTTTAT	NA	False	NA	-3	True	AAGAAA	-22	NA	5015313	5010374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
Isoform_113470_5	chr2	+	3053	1	FSM	ENSMUSG00000096484.2	ENSMUST00000180347.2	2493	1	-88	-472	-88	472	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGGATGACAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	83803378	83806431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83803400_83806400
Isoform_113472_6	chr2	+	3159	1	FSM	ENSMUSG00000096337.2	ENSMUST00000178533.2	2493	1	-88	-578	-88	578	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGCTAATTTTCATTGT	2597	False	NA	NA	False	AATAAA	-19	NA	83809188	83812347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83809200_83812300
Isoform_113473_4	chr2	+	3159	1	FSM	ENSMUSG00000079247.3	ENSMUST00000099947.3	2493	1	-88	-578	-88	578	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGCTAATTTTCATTGT	7958	False	NA	NA	False	AATAAA	-19	NA	83820808	83823967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_83820800_83824000
Isoform_113475_5	chr2	+	5168	1	Intergenic	novelGene_6643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	2931	False	NA	NA	False	NA	NA	NA	154196287	154201455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154196300_154201500
Isoform_113479_12	chr2	+	155	1	Intergenic	novelGene_6366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	84407742	84407897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_84407700_84407900
Isoform_113485_5	chr2	-	178	1	Intergenic	novelGene_6367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTGAACTT	NA	False	NA	NA	False	NA	NA	NA	84458644	84458466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_84458500_84458600
Isoform_113486_20	chr2	+	216	1	Intergenic	novelGene_6368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCAGATCTTGCTAATAT	NA	False	NA	NA	False	AATATA	-21	NA	84482970	84483186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_84483000_84483200
Isoform_113489_6	chr2	-	189	1	Intergenic	novelGene_6369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGGAAAAAGAAAACTGCC	3130	False	NA	NA	False	ACTAAA	-2	NA	84510561	84510372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_84510400_84510600
Isoform_11349_7	chr11	-	2507	5	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	65.3241915372858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTGTTTTTATTAC	NA	False	NA	0	True	AAGAAA	-25	NA	5015342	5010371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5011818_5012154_5012327_5012593_5012702_5013825_5014479_5015214
Isoform_113490_9	chr2	-	172	1	Intergenic	novelGene_6370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATGTATATAATC	2697	False	NA	NA	False	NA	NA	NA	84510994	84510822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_84510800_84511000
Isoform_113492_16	chr2	+	184	1	Intergenic	novelGene_6371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATACAATTTAAATAATAA	6840	False	NA	NA	False	NA	NA	NA	84532313	84532497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_84532300_84532500
Isoform_113493_4	chr2	+	3911	1	Antisense	novelGene_ENSMUSG00000034075.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84538458	84542369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_84538500_84542400
Isoform_113494_59	chr2	+	177	1	Intergenic	novelGene_6372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACCTTTCAAACATT	523	False	NA	NA	False	NA	NA	NA	84550462	84550639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_84550500_84550600
Isoform_113497_3	chr2	+	1581	1	Intergenic	novelGene_5972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCAATTTGTTTCTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	12082606	12084187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_12082600_12084200
Isoform_113499_13	chr2	-	2979	1	Antisense	novelGene_ENSMUSG00000034059.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	84571458	84568479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_84568500_84571500
Isoform_113502_25	chr2	-	175	1	Intergenic	novelGene_6373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGAGAAAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	84617037	84616862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_84616900_84617000
Isoform_113503_4	chr2	+	176	1	Intergenic	novelGene_6374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTAGCAGTGGATGTG	NA	False	NA	NA	False	NA	NA	NA	84634607	84634783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_84634600_84634800
Isoform_113507_18	chr2	-	165	1	Intergenic	novelGene_6375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	408	False	NA	NA	False	NA	NA	NA	84678435	84678270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_84678300_84678400
Isoform_113513_8	chr2	+	177	1	Intergenic	novelGene_5973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGGAGATGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	12272773	12272950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_12272800_12273000
Isoform_113514_7	chr2	-	173	1	Intergenic	novelGene_6376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACGTTT	NA	False	NA	NA	False	NA	NA	NA	85112013	85111840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_85111800_85112000
Isoform_113515_9	chr2	-	176	1	Intergenic	novelGene_6377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATATATATGTTT	NA	False	NA	NA	False	NA	NA	NA	85492775	85492599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_85492600_85492800
Isoform_113517_13	chr2	+	157	1	Intergenic	novelGene_6378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	87319239	87319396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_87319200_87319400
Isoform_113518_104	chr2	-	173	1	Intergenic	novelGene_6379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	87353262	87353089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_87353100_87353300
Isoform_113519_4	chr2	-	190	1	FSM	ENSMUSG00000083267.3	ENSMUST00000119555.3	892	1	871	-169	871	169	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAGGCTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	87353846	87353656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_87353700_87353800
Isoform_113520_178	chr2	+	724	1	FSM	ENSMUSG00000082908.5	ENSMUST00000119272.2	253	1	-115	-356	-115	356	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	87356373	87357097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_87356400_87357100
Isoform_113523_37	chr2	+	174	1	Intergenic	novelGene_6380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAACC	NA	False	NA	NA	False	NA	NA	NA	87371779	87371953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_87371800_87372000
Isoform_113524_3	chr2	-	161	1	Intergenic	novelGene_6381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	87395914	87395753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_87395800_87395900
Isoform_113525_6	chr2	+	177	1	Intergenic	novelGene_6382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAATAAAAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	87456542	87456719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_87456500_87456700
Isoform_113526_14	chr2	+	177	1	Intergenic	novelGene_6383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87551964	87552141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_87552000_87552100
Isoform_113527_17	chr2	-	179	1	Intergenic	novelGene_6384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTATAGTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	87649963	87649784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_87649800_87650000
Isoform_113529_26	chr8	+	177	1	Intergenic	novelGene_10666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAATATA	NA	False	NA	NA	False	NA	NA	NA	62803479	62803656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_62803500_62803700
Isoform_11353_28	chr11	-	2909	5	NIC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	85	junction_4	39.0600499231632	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCATTTGTTTTTAT	NA	False	NA	-3	True	AAGAAA	-22	NA	5015313	5010374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
Isoform_113530_8	chr2	+	549	1	FSM	ENSMUSG00000091703.3	ENSMUST00000165784.3	470	1	0	-79	0	79	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAATAATCTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	89978762	89979311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_89978800_89979300
Isoform_113532_26	chr2	-	200	1	Intergenic	novelGene_6385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTTAGAGTCAGTCGC	NA	False	NA	NA	False	AATAAA	-3	NA	90004067	90003867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_90003900_90004100
Isoform_113536_10	chr2	-	173	1	Intergenic	novelGene_6386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAAGAGTTTGAGT	5033	False	NA	NA	False	NA	NA	NA	90390148	90389975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_90390000_90390100
Isoform_113538_4	chr2	-	1916	1	Intergenic	novelGene_6387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATGTATTTAATTGA	3854	False	NA	NA	False	ATTAAA	-24	NA	90467399	90465483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_90465500_90467400
Isoform_113539_11	chr2	-	173	1	Intergenic	novelGene_6388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATCTAAAATATAAA	3157	False	NA	NA	False	NA	NA	NA	90476014	90475841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_90475800_90476000
Isoform_113543_16	chr2	+	182	1	Intergenic	novelGene_6389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATAAAATAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90512592	90512774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_90512600_90512800
Isoform_113545_3	chr2	-	2155	1	Intergenic	novelGene_6390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAATTAAAAAAAAAA	8898	False	NA	NA	False	NA	NA	NA	90547464	90545309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_90545300_90547500
Isoform_113547_83	chr2	-	178	1	Intergenic	novelGene_6391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTGATGATGAC	NA	False	NA	NA	False	NA	NA	NA	90617411	90617233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_90617200_90617400
Isoform_113548_5	chr2	-	174	1	Intergenic	novelGene_5974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAAAGGGCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	12880548	12880374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_12880400_12880500
Isoform_113549_7	chr2	-	176	1	Intergenic	novelGene_6392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAACCCAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	90625467	90625291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_90625300_90625500
Isoform_11355_14	chr11	-	3521	5	NIC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	12	0	intron_retention	FALSE	canonical	3	54	junction_4	51.0759238780857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTTTTTGCATTTGT	NA	False	NA	-9	True	AAGAAA	-16	NA	5015315	5010380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
Isoform_113550_9	chr2	-	156	1	Intergenic	novelGene_6250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	8790	False	NA	NA	False	NA	NA	NA	59995947	59995791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_59995800_59995900
Isoform_113552_14	chr2	-	182	1	Intergenic	novelGene_6394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGTTGTGGAA	NA	False	NA	NA	False	NA	NA	NA	90661664	90661482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_90661500_90661700
Isoform_113554_35	chr2	+	174	1	Intergenic	novelGene_6395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAATGGCCTC	NA	False	NA	NA	False	NA	NA	NA	90668534	90668708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_90668500_90668700
Isoform_113558_4	chr2	+	174	1	Intergenic	novelGene_6396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACAAGTCTGCTCA	NA	False	NA	NA	False	NA	NA	NA	90698301	90698475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_90698300_90698500
Isoform_113559_6	chr2	+	927	1	Genic_Genomic	ENSMUSG00000026730.13	novel	NA	NA	NA	NA	-22	-55584	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	4690	False	NA	NA	False	TATAAA	-17	NA	12928829	12929756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_12928800_12929800
Isoform_113561_22	chr2	+	603	1	ISM	ENSMUSG00000040794.6	ENSMUST00000111466.3	1290	2	4061	2	4061	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGACTGTGATGCCTT	NA	False	NA	30	True	AATAAA	-36	NA	90720264	90720867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_90720300_90720900
Isoform_113565_9	chr2	+	1997	1	NIC	ENSMUSG00000005505.13	novel	2343	4	NA	NA	-5	707	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2359	False	NA	NA	False	NA	NA	NA	90735107	90737104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_90735100_90737100
Isoform_113568_226	chr2	-	260	2	Genic_Genomic	ENSMUSG00000080977.2	novel	317	1	NA	NA	-159620	-285	multi-exon	FALSE	non_canonical	0	0	junction_1	0	226	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAGAAGTGTGCCCAGT	NA	False	NA	NA	False	ATTAAA	-34	NA	90794540	90634888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_90634920_90794311
Isoform_113570_16	chr2	-	187	1	Intergenic	novelGene_6765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGTTTCCAAAAGTAT	1339	False	NA	NA	False	NA	NA	NA	165899589	165899402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_165899400_165899600
Isoform_113599_4	chr2	+	172	1	Intergenic	novelGene_6397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAATGTGGAT	4869	False	NA	NA	False	NA	NA	NA	90852413	90852585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_90852400_90852600
Isoform_113600_4	chr2	-	1491	1	Intergenic	novelGene_5975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAGAAATGAAGC	NA	False	NA	NA	False	NA	NA	NA	12991929	12990438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_12990400_12991900
Isoform_113601_5	chr2	-	623	1	FSM	ENSMUSG00000082108.4	ENSMUST00000118208.2	345	1	-237	-41	-237	41	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGCTGGTCTCACTTGT	NA	False	NA	-14	True	AATAAA	-15	NA	90861704	90861081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_90861100_90861700
Isoform_113602_5	chr2	-	161	1	Intergenic	novelGene_6398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTGTATGGCGTG	NA	False	NA	NA	False	NA	NA	NA	90868320	90868159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_90868200_90868300
Isoform_113603_3	chr2	-	2358	1	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-7	498	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	4294	False	NA	NA	False	NA	NA	NA	90900635	90898277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_90898300_90900600
Isoform_113604_99	chr2	-	176	1	Intergenic	novelGene_6399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTCCAGGACA	7959	False	NA	NA	False	NA	NA	NA	91055161	91054985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91055000_91055200
Isoform_113605_3	chr2	+	160	1	Intergenic	novelGene_6400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAACTA	6774	False	NA	NA	False	NA	NA	NA	91061368	91061528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_91061400_91061500
Isoform_113606_5	chr2	+	160	1	Intergenic	novelGene_6401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGCC	NA	False	NA	NA	False	NA	NA	NA	91067833	91067993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_91067800_91068000
Isoform_113607_43	chr2	+	176	1	Intergenic	novelGene_6402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAGAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	91068217	91068393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_91068200_91068400
Isoform_113609_11	chr2	-	170	1	Intergenic	novelGene_6404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAATAATAATAAATTTT	9361	False	NA	NA	False	NA	NA	NA	91075217	91075047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91075000_91075200
Isoform_113610_8	chr2	-	150	1	Intergenic	novelGene_6405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAAATCTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91124471	91124321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91124300_91124500
Isoform_113612_7	chr2	-	176	1	Intergenic	novelGene_6406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAACCCAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	91128025	91127849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91127800_91128000
Isoform_113613_422	chr2	-	201	1	Intergenic	novelGene_6407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	422	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTTGTTCAACCAACT	2166	False	NA	NA	False	NA	NA	NA	91200502	91200301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91200300_91200500
Isoform_113618_34	chr2	+	176	1	Intergenic	novelGene_6408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATAAGCTCAATTC	NA	False	NA	NA	False	NA	NA	NA	91252883	91253059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_91252900_91253100
Isoform_113619_5	chr2	-	178	1	Intergenic	novelGene_6409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAATAATAAA	6604	False	NA	NA	False	NA	NA	NA	91326624	91326446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91326400_91326600
Isoform_113620_5	chr2	-	3919	1	Genic_Genomic	ENSMUSG00000026726.11	novel	NA	NA	NA	NA	179268	3897	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGAGGCCTGGACAATG	2099	False	NA	NA	False	NA	NA	NA	13281170	13277251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_13277300_13281200
Isoform_113622_28	chr4	+	183	1	Intergenic	novelGene_8244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	149378364	149378547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_149378400_149378500
Isoform_113624_22	chr2	-	1320	1	NIC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	4	-440	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91480120	91478800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_91478800_91480100
Isoform_113631_5	chr2	-	168	1	Intergenic	novelGene_6410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	91561989	91561821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91561800_91562000
Isoform_113632_48	chr2	-	161	1	Intergenic	novelGene_6411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAAAAGTCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	91563768	91563607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91563600_91563800
Isoform_113635_115	chr2	-	177	1	Intergenic	novelGene_6412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	91564973	91564796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91564800_91565000
Isoform_113636_4	chr2	+	202	1	Intergenic	novelGene_6413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTAGTATTGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	91577899	91578101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_91577900_91578100
Isoform_113638_4	chr2	-	333	1	Intergenic	novelGene_6414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	2095	False	NA	NA	False	NA	NA	NA	91582890	91582557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91582600_91582900
Isoform_113640_10	chr2	+	176	1	Intergenic	novelGene_6415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTTATTTA	4975	False	NA	NA	False	NA	NA	NA	91591144	91591320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_91591100_91591300
Isoform_113641_14	chr2	-	183	1	Intergenic	novelGene_6416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAACAGTGG	NA	False	NA	NA	False	NA	NA	NA	91592635	91592452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91592500_91592600
Isoform_113642_74	chr2	-	180	1	Intergenic	novelGene_6417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91606618	91606438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91606400_91606600
Isoform_113643_4	chr2	-	1938	1	Intergenic	novelGene_6418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8778	False	NA	NA	False	NA	NA	NA	91620492	91618554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91618600_91620500
Isoform_113645_7	chr2	-	184	1	Intergenic	novelGene_6419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAGATTCCTA	3634	False	NA	NA	False	NA	NA	NA	91632826	91632642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91632600_91632800
Isoform_113647_15	chr2	-	182	1	Intergenic	novelGene_6420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGGATTCAACAAAA	6152	False	NA	NA	False	NA	NA	NA	91643875	91643693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91643700_91643900
Isoform_113648_14	chr2	-	181	1	Intergenic	novelGene_6421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91661063	91660882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91660900_91661100
Isoform_113649_5	chr2	-	180	1	Intergenic	novelGene_6422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	91723459	91723279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91723300_91723500
Isoform_113654_119	chr2	+	177	1	Intergenic	novelGene_6423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAGATTTAT	1443	False	NA	NA	False	NA	NA	NA	91965317	91965494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_91965300_91965500
Isoform_113655_31	chr6	-	181	1	Intergenic	novelGene_9547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	503	False	NA	NA	False	NA	NA	NA	115661237	115661056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_115661100_115661200
Isoform_113656_4	chr2	+	150	1	Intergenic	novelGene_5976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	13970231	13970381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_13970200_13970400
Isoform_113658_7	chr2	-	159	1	Intergenic	novelGene_6425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	8934	False	NA	NA	False	NA	NA	NA	91992964	91992805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91992800_91993000
Isoform_113660_4	chr2	-	1779	1	Intergenic	novelGene_6426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	92031591	92029812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_92029800_92031600
Isoform_113661_51	chr2	-	191	1	Intergenic	novelGene_6427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	92037869	92037678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_92037700_92037900
Isoform_113662_3	chr2	+	181	1	Intergenic	novelGene_6428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAACATATTTTA	NA	False	NA	NA	False	NA	NA	NA	92046545	92046726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_92046500_92046700
Isoform_113663_8	chr16	+	186	1	Intergenic	novelGene_4430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATAAGTTG	NA	False	NA	NA	False	NA	NA	NA	23093964	23094150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_23094000_23094200
Isoform_113664_88	chr14	+	178	1	Intergenic	novelGene_3465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	37450172	37450350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_37450200_37450400
Isoform_113665_9	chr2	-	182	1	Intergenic	novelGene_6430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTGTTTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	92146256	92146074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_92146100_92146300
Isoform_113666_4	chr2	+	176	1	Intergenic	novelGene_6431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTGGGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	92158959	92159135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_92159000_92159100
Isoform_113667_4	chr2	-	3596	1	Genic_Genomic	ENSMUSG00000068742.12	novel	NA	NA	NA	NA	-34	-3578	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAATAAAATCTA	NA	False	NA	NA	False	TTTAAA	-16	NA	92264422	92260826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_92260800_92264400
Isoform_113668_3	chr2	+	189	1	Intergenic	novelGene_6432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGAGATTATACTGTAA	NA	False	NA	NA	False	NA	NA	NA	92298830	92299019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_92298800_92299000
Isoform_113669_5	chr2	+	179	1	Intergenic	novelGene_6433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGAATGGAGATGG	NA	False	NA	NA	False	NA	NA	NA	92341978	92342157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_92342000_92342200
Isoform_113673_7	chr2	+	195	1	Intergenic	novelGene_5977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTAAAAAAAAAAAAAGTAC	9778	False	NA	NA	False	NA	NA	NA	14084004	14084199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_14084000_14084200
Isoform_113680_6	chr2	-	6450	1	Intergenic	novelGene_5978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCAATTCTAAGGCT	NA	False	NA	NA	False	NA	NA	NA	14130081	14123631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_14123600_14130100
Isoform_113682_7	chr2	-	173	1	Intergenic	novelGene_6434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATGATGGGTTTTGG	2193	False	NA	NA	False	NA	NA	NA	93742430	93742257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_93742300_93742400
Isoform_113684_75	chr2	-	1234	1	FSM	ENSMUSG00000087006.4	ENSMUST00000148314.3	1240	1	3	3	3	3	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCTCCGGGCTTTGGA	NA	False	NA	-6	True	AATAAA	-20	NA	93787391	93786157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93786200_93787400
Isoform_113685_62	chr2	-	1289	1	FSM	ENSMUSG00000087006.4	ENSMUST00000148314.3	1240	1	-53	4	-53	2	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTCTCCGGGCTTTGG	NA	False	NA	-7	True	AATAAA	-19	NA	93787447	93786158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93786200_93787400
Isoform_113686_22	chr2	-	1363	1	FSM	ENSMUSG00000087006.4	ENSMUST00000099689.5	1386	1	25	-2	25	2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTCTCCGGGCTTTGG	NA	False	NA	-7	True	AATAAA	-19	NA	93787521	93786158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93786200_93787500
Isoform_113687_4	chr2	-	1529	1	FSM	ENSMUSG00000087006.4	ENSMUST00000099689.5	1386	1	-140	-3	-140	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCTCCGGGCTTTGGA	NA	False	NA	-6	True	AATAAA	-20	NA	93787686	93786157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_93786200_93787700
Isoform_113690_5	chr2	+	174	1	Intergenic	novelGene_6436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAGAGGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	93846819	93846993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_93846800_93847000
Isoform_113693_3	chr2	+	2317	1	Intergenic	novelGene_6437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACCCCAAACAATTGA	NA	False	NA	NA	False	NA	NA	NA	93984251	93986568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_93984300_93986600
Isoform_113697_453	chr2	-	1148	1	FSM	ENSMUSG00000081476.2	ENSMUST00000117207.2	597	1	-26	-525	-26	525	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAATATCC	NA	False	NA	NA	False	AATAAA	-18	NA	94215469	94214321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_94214300_94215500
Isoform_113711_66	chr2	+	177	1	Intergenic	novelGene_6438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	95859297	95859474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_95859300_95859500
Isoform_113713_1395	chr1	-	176	1	Intergenic	novelGene_677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGTATAATATTA	NA	False	NA	NA	False	NA	NA	NA	185115565	185115389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_185115400_185115600
Isoform_113715_36	chr2	-	176	1	Intergenic	novelGene_6440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAGTTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	99055736	99055560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_99055600_99055700
Isoform_113716_90	chr1	+	176	1	Intergenic	novelGene_655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGTGGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	181827637	181827813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181827600_181827800
Isoform_113720_4	chr2	-	6252	1	Intergenic	novelGene_6441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTAGTCGGCCATCA	NA	False	NA	NA	False	NA	NA	NA	100377019	100370767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_100370800_100377000
Isoform_113723_10	chr2	-	269	1	Intergenic	novelGene_6442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATTTTATTAAGAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	101499954	101499685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_101499700_101500000
Isoform_113724_7	chr2	+	682	1	NIC	ENSMUSG00000027164.9	novel	1949	2	NA	NA	2	-7123	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101508775	101509457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_101508800_101509500
Isoform_113725_6	chr2	+	170	1	Intergenic	novelGene_6443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAACAAATAAGATTAAAT	NA	False	NA	NA	False	NA	NA	NA	101643789	101643959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_101643800_101644000
Isoform_113726_211	chr2	+	177	1	Intergenic	novelGene_6444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102031509	102031686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_102031500_102031700
Isoform_113727_5	chr2	+	6399	1	Intergenic	novelGene_6445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAGGAAAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	102162388	102168787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_102162400_102168800
Isoform_113729_78	chr2	-	2484	1	FSM	ENSMUSG00000075012.5	ENSMUST00000099678.5	3134	1	642	8	642	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTAATTCATGAGGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	102282202	102279718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_102279700_102282200
Isoform_113731_13	chr2	-	174	1	Intergenic	novelGene_6447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACCACTATATTCT	NA	False	NA	NA	False	NA	NA	NA	102293035	102292861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_102292900_102293000
Isoform_113733_49	chr2	-	213	1	Intergenic	novelGene_6448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACTTTGCTGTATATAT	8874	False	NA	NA	False	NA	NA	NA	102914859	102914646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_102914600_102914900
Isoform_113734_11	chr2	-	172	1	Intergenic	novelGene_5936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGTATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	3568714	3568542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_3568500_3568700
Isoform_113735_4	chr2	-	1075	1	NIC	ENSMUSG00000026707.16	novel	3042	12	NA	NA	2	-1015	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAGAA	948	False	NA	NA	False	NA	NA	NA	15054121	15053046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_15053000_15054100
Isoform_113737_92	chr13	-	176	1	Intergenic	novelGene_2930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAATAT	NA	False	NA	NA	False	NA	NA	NA	17903966	17903790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_17903800_17904000
Isoform_113754_143	chr2	+	178	1	Intergenic	novelGene_6450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5106	False	NA	NA	False	NA	NA	NA	103611540	103611718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_103611500_103611700
Isoform_113756_3	chr2	-	191	1	Intergenic	novelGene_6451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTTTAATGATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103648783	103648592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_103648600_103648800
Isoform_113758_22	chr2	-	174	1	Intergenic	novelGene_6452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGTCACATTTATTA	NA	False	NA	NA	False	NA	NA	NA	103659077	103658903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_103658900_103659100
Isoform_113759_18	chr2	-	209	1	Intergenic	novelGene_6453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAAAAACT	NA	False	NA	NA	False	AAAAAG	-16	NA	103663037	103662828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_103662800_103663000
Isoform_113772_13	chr2	+	194	1	Intergenic	novelGene_6454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACCATTTTATTGGCCT	NA	False	NA	NA	False	NA	NA	NA	104201940	104202134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_104201900_104202100
Isoform_113774_8	chr2	+	177	1	Intergenic	novelGene_5979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGTGGTTCATAG	NA	False	NA	NA	False	NA	NA	NA	15883043	15883220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_15883000_15883200
Isoform_113777_87	chr2	-	177	1	Intergenic	novelGene_6455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	104313116	104312939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_104312900_104313100
Isoform_113779_9	chr2	+	1757	1	NIC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	-7112	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	104389526	104391283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_104389500_104391300
Isoform_113780_8	chr2	+	2841	1	NIC	ENSMUSG00000086454.8	novel	770	3	NA	NA	0	-6026	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTTTTTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	104389528	104392369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_104389500_104392400
Isoform_113784_4	chr2	+	4479	1	Intergenic	novelGene_5980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16032763	16037242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_16032800_16037200
Isoform_113785_71	chr2	-	174	1	Intergenic	novelGene_6456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAACTATATATTCAAA	9727	False	NA	NA	False	NA	NA	NA	104484035	104483861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_104483900_104484000
Isoform_113786_10	chr2	+	180	1	Intergenic	novelGene_6457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAAGCATATGTT	2468	False	NA	NA	False	NA	NA	NA	104496274	104496454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_104496300_104496500
Isoform_113787_168	chr2	-	175	1	Intergenic	novelGene_5981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16076376	16076201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_16076200_16076400
Isoform_113790_5	chr2	+	1793	1	Intergenic	novelGene_6458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATACGAGTATTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	104647231	104649024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_104647200_104649000
Isoform_113791_16	chr2	+	173	1	Intergenic	novelGene_5982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16313276	16313449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_16313300_16313400
Isoform_113792_8	chr2	+	186	1	Intergenic	novelGene_6459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTATAAAGAACTC	NA	False	NA	NA	False	NA	NA	NA	104704190	104704376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_104704200_104704400
Isoform_113794_12	chr2	+	227	1	Intergenic	novelGene_6460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTCTTAGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	104717905	104718132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_104717900_104718100
Isoform_113796_20	chr2	-	221	1	Intergenic	novelGene_6461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAATATAAGTT	NA	False	NA	NA	False	NA	NA	NA	104768055	104767834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_104767800_104768100
Isoform_113799_7	chr2	-	174	1	Intergenic	novelGene_6462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAATGGGGATT	NA	False	NA	NA	False	NA	NA	NA	104945765	104945591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_104945600_104945800
Isoform_1138_1170	SIRV6	+	1162	5	FSM	SIRV6A	SIRV610	1163	5	1	0	1	0	multi-exon	FALSE	canonical	3	12902	junction_1	2966.72052736688	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2473	11690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
Isoform_113800_18	chr2	+	156	1	Intergenic	novelGene_6463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	105194909	105195065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_105194900_105195100
Isoform_113808_15	chr2	-	747	1	FSM	ENSMUSG00000080859.2	ENSMUST00000119438.2	645	1	-39	-63	-39	63	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	105385229	105384482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_105384500_105385200
Isoform_113810_11	chr2	-	180	1	Intergenic	novelGene_6464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCCTTTTTTTTTGCA	NA	False	NA	NA	False	NA	NA	NA	105470666	105470486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_105470500_105470700
Isoform_113811_5	chr2	+	3219	1	NIC	ENSMUSG00000042670.6	novel	955	7	NA	NA	11	-57691	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTCT	NA	False	NA	NA	False	NA	NA	NA	105734993	105738212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_105735000_105738200
Isoform_113812_5	chr2	-	185	1	Intergenic	novelGene_5983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATATATTTAGAAT	NA	False	NA	NA	False	NA	NA	NA	16394647	16394462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_16394500_16394600
Isoform_113815_37	chr2	+	2289	1	Antisense	novelGene_ENSMUSG00000027122.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAATCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106799428	106801717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_106799400_106801700
Isoform_113817_8	chr2	-	2359	1	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	0	-4631	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATACCTGACTGTGCA	NA	False	NA	NA	False	NA	NA	NA	106804742	106802383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_106802400_106804700
Isoform_113818_17	chr2	-	174	1	Intergenic	novelGene_6465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAGAGCAGGCTGAG	NA	False	NA	NA	False	NA	NA	NA	107698737	107698563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_107698600_107698700
Isoform_113819_10	chr2	+	206	1	Intergenic	novelGene_5984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACTGACACTGGG	NA	False	NA	NA	False	NA	NA	NA	16609774	16609980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_16609800_16610000
Isoform_113820_16	chr2	-	172	1	Intergenic	novelGene_6466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAATTTGTATTC	NA	False	NA	NA	False	NA	NA	NA	108067503	108067331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_108067300_108067500
Isoform_113821_13	chr2	-	415	1	FSM	ENSMUSG00000083424.4	ENSMUST00000121779.2	333	1	-48	-34	-48	34	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	AATAAA	-15	NA	108705651	108705236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_108705200_108705700
Isoform_113827_42	chr2	+	188	1	Intergenic	novelGene_6467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCTGTGGGGGCATTTT	NA	False	NA	NA	False	NA	NA	NA	109591429	109591617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_109591400_109591600
Isoform_113828_5	chr2	+	237	1	Intergenic	novelGene_6468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGGGTCACATATCAGAT	5615	False	NA	NA	False	NA	NA	NA	109699227	109699464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_109699200_109699500
Isoform_113837_93	chr2	-	174	1	Intergenic	novelGene_6469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	109731938	109731764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_109731800_109731900
Isoform_113838_18	chr2	-	176	1	Intergenic	novelGene_6470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109862222	109862046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_109862000_109862200
Isoform_113839_10	chr2	-	167	1	Intergenic	novelGene_6471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAATATAATAA	NA	False	NA	NA	False	NA	NA	NA	110492632	110492465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_110492500_110492600
Isoform_113840_4	chr2	-	177	1	Intergenic	novelGene_6472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTATTACTTTTATT	NA	False	NA	NA	False	NA	NA	NA	110535980	110535803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_110535800_110536000
Isoform_113841_52	chr6	+	175	1	Intergenic	novelGene_9294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAACCAGTA	728	False	NA	NA	False	NA	NA	NA	38559683	38559858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38559700_38559900
Isoform_113843_132	chr2	+	187	1	Intergenic	novelGene_6474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	111927806	111927993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_111927800_111928000
Isoform_113848_4	chr2	+	191	1	Intergenic	novelGene_5985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAACTAAACTAAG	NA	False	NA	NA	False	NA	NA	NA	17383339	17383530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_17383300_17383500
Isoform_113850_43	chr2	-	179	1	Intergenic	novelGene_6475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	112228540	112228361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_112228400_112228500
Isoform_113853_10	chr5	+	175	1	Intergenic	novelGene_8884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTTTGAGGAGC	NA	False	NA	NA	False	NA	NA	NA	122935730	122935905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_122935700_122935900
Isoform_113854_11	chr2	-	172	1	Intergenic	novelGene_6476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGTGTGTGGA	NA	False	NA	NA	False	NA	NA	NA	112342642	112342470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_112342500_112342600
Isoform_113856_19	chr2	-	175	1	Intergenic	novelGene_6477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGGTAAAGAATTC	NA	False	NA	NA	False	NA	NA	NA	113023564	113023389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_113023400_113023600
Isoform_113862_29	chr2	-	894	1	FSM	ENSMUSG00000096006.2	ENSMUST00000178049.2	1316	1	5	417	5	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTAAGATTTGTTT	7165	False	NA	NA	False	AAGAAA	-15	NA	113751481	113750587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_113750600_113751500
Isoform_113866_3	chr2	-	521	1	NIC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	8	-2352	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114031913	114031392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_114031400_114031900
Isoform_113867_8	chr2	+	3715	1	Intergenic	novelGene_6478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114390605	114394320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_114390600_114394300
Isoform_113869_26	chr2	+	159	1	Intergenic	novelGene_5986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	17823750	17823909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_17823800_17823900
Isoform_113870_4	chr2	-	1502	1	NIC	ENSMUSG00000057147.14	novel	2632	8	NA	NA	4	-11307	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCCTGTTGAATGGAAG	NA	False	NA	NA	False	NA	NA	NA	114485364	114483862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_114483900_114485400
Isoform_113871_5	chr2	-	177	1	Intergenic	novelGene_6479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGTTGTATATAA	NA	False	NA	NA	False	NA	NA	NA	114979355	114979178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_114979200_114979400
Isoform_113872_133	chr2	+	212	1	Intergenic	novelGene_5987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTGAATTACCAAAAGC	NA	False	NA	NA	False	NA	NA	NA	17850489	17850701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_17850500_17850700
Isoform_113874_5	chr2	-	1575	1	Intergenic	novelGene_6480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	115532470	115530895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_115530900_115532500
Isoform_113876_12	chr2	+	3398	1	Intergenic	novelGene_6481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115721636	115725034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_115721600_115725000
Isoform_113877_12	chr2	+	231	1	Intergenic	novelGene_6482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCATGAGCAATGAAAC	NA	False	NA	NA	False	NA	NA	NA	115942527	115942758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_115942500_115942800
Isoform_113879_8	chr2	+	2581	1	FSM	ENSMUSG00000076376.3	ENSMUST00000102421.3	100	1	87	-2568	87	2568	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAATCGTGTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	117015694	117018275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_117015700_117018300
Isoform_113880_10	chr2	+	554	1	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	21246	2	12203	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCACTGTGTCATGGCT	NA	False	NA	42	True	ATTAAA	-20	NA	117101465	117102019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_117101500_117102000
Isoform_113887_3	chr2	+	823	1	Intergenic	novelGene_6483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAGGAGAAGGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118385468	118386291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_118385500_118386300
Isoform_113888_4	chr2	-	157	1	Intergenic	novelGene_5988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGCCCAAATTCCA	NA	False	NA	NA	False	NA	NA	NA	17940259	17940102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_17940100_17940300
Isoform_113890_13	chr2	+	177	1	Intergenic	novelGene_6485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAAGGTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	118484179	118484356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_118484200_118484400
Isoform_113891_73	chr2	+	3044	1	FSM	ENSMUSG00000074918.5	ENSMUST00000149978.2	3053	1	7	2	7	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGTGTAAGTTGGTCA	NA	False	NA	2	True	AATACA	-18	NA	118576245	118579289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118576200_118579300
Isoform_113894_18	chr2	+	178	1	Intergenic	novelGene_6486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	118584419	118584597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_118584400_118584600
Isoform_113896_48	chr2	+	1215	1	Intergenic	novelGene_5989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17940976	17942191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_17941000_17942200
Isoform_113900_8	chr2	-	6988	3	NNC	ENSMUSG00000086421.2	novel	874	2	NA	NA	-2934	-150	intron_retention	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	118667537	118660504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_118662853_118662875_118664057_118664078
Isoform_113901_40	chr2	+	2050	1	FSM	ENSMUSG00000074916.6	ENSMUST00000099546.6	2090	1	37	3	19	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGCAACTCTGTAATT	9749	False	NA	5	True	AATAAA	-16	NA	118757013	118759063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_118757000_118759100
Isoform_113903_10	chr2	-	156	1	Intergenic	novelGene_6487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	118817062	118816906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_118816900_118817100
Isoform_113904_12	chr2	-	180	1	Intergenic	novelGene_6488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAGCAAGTG	NA	False	NA	NA	False	NA	NA	NA	118840301	118840121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_118840100_118840300
Isoform_113905_3	chr2	-	177	1	Intergenic	novelGene_6489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGCAGTGGGAAG	NA	False	NA	NA	False	NA	NA	NA	118855848	118855671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_118855700_118855800
Isoform_113906_7	chr2	+	174	1	Intergenic	novelGene_6490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGACGTCTTATGGG	NA	False	NA	NA	False	NA	NA	NA	118860534	118860708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_118860500_118860700
Isoform_113907_5	chr2	+	181	1	Intergenic	novelGene_6491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGTATACAGGTAA	NA	False	NA	NA	False	NA	NA	NA	118890333	118890514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_118890300_118890500
Isoform_113908_3	chr2	-	508	1	Intergenic	novelGene_6492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAACTCACTCTCTAGT	NA	False	NA	NA	False	CATAAA	-19	NA	118943248	118942740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_118942700_118943200
Isoform_113911_13	chr2	-	188	1	Intergenic	novelGene_6493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAAAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	118959807	118959619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_118959600_118959800
Isoform_113913_12	chr2	-	176	1	Intergenic	novelGene_6494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	119015322	119015146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119015100_119015300
Isoform_113914_21	chr10	+	169	1	Intergenic	novelGene_1220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	121192878	121193047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_121192900_121193000
Isoform_113918_8	chr2	+	155	1	Intergenic	novelGene_6496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	119111554	119111709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_119111600_119111700
Isoform_113919_4	chr2	-	170	1	Intergenic	novelGene_6497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATATATATACGCTTT	NA	False	NA	NA	False	NA	NA	NA	119116082	119115912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119115900_119116100
Isoform_113925_7	chr2	+	177	1	Intergenic	novelGene_6498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGATGACACAA	NA	False	NA	NA	False	NA	NA	NA	119224990	119225167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_119225000_119225200
Isoform_113926_3	chr2	+	161	1	Intergenic	novelGene_6499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAATTAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	119234667	119234828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_119234700_119234800
Isoform_113928_4	chr2	-	177	1	Intergenic	novelGene_6500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGACAAGAGGGT	NA	False	NA	NA	False	NA	NA	NA	119247020	119246843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119246800_119247000
Isoform_113930_34	chr2	-	1669	1	Intergenic	novelGene_6501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-6	NA	119311014	119309345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119309300_119311000
Isoform_113932_5	chr2	-	169	1	Intergenic	novelGene_6502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	119333657	119333488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119333500_119333700
Isoform_113933_9	chr2	+	179	1	Intergenic	novelGene_6503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAAAATGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119339832	119340011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_119339800_119340000
Isoform_113935_6	chr2	-	156	1	Intergenic	novelGene_6504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	119374690	119374534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119374500_119374700
Isoform_113954_9	chr2	+	167	1	Intergenic	novelGene_6505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATATTAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	119491459	119491626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_119491500_119491600
Isoform_113957_3	chr2	-	222	1	Intergenic	novelGene_5991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTACTATTATTGTTTGC	6366	False	NA	NA	False	NA	NA	NA	18024603	18024381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_18024400_18024600
Isoform_113963_6	chr2	-	198	1	Intergenic	novelGene_6506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACATAGAGGGACCATCA	6406	False	NA	NA	False	NA	NA	NA	119659745	119659547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119659500_119659700
Isoform_113970_5	chr2	+	790	1	Antisense	novelGene_ENSMUSG00000054057.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCTTACTTGTTTGA	4463	False	NA	NA	False	NA	NA	NA	18032428	18033218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_18032400_18033200
Isoform_113972_87	chr2	-	175	1	Intergenic	novelGene_6507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACATTTAAATGG	NA	False	NA	NA	False	NA	NA	NA	119681185	119681010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119681000_119681200
Isoform_113974_3	chr2	-	2652	1	Antisense	novelGene_ENSMUSG00000033943.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGGACCTCCTGTACAAA	NA	False	NA	NA	False	NA	NA	NA	119729913	119727261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_119727300_119729900
Isoform_113975_9	chr2	-	176	1	Intergenic	novelGene_6508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAGAAAGAAA	3899	False	NA	NA	False	NA	NA	NA	119739283	119739107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119739100_119739300
Isoform_113976_9	chr2	-	175	1	Intergenic	novelGene_6509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCTAAACTCTAACTTA	5582	False	NA	NA	False	NA	NA	NA	119754833	119754658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119754700_119754800
Isoform_113977_3	chr2	-	3559	1	ISM	ENSMUSG00000054074.10	ENSMUST00000091420.6	4376	2	1151	259	549	-259	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCCTGGTTCCATACA	3274	False	NA	-7	True	ATTAAA	-11	NA	18052711	18049152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_18049200_18052700
Isoform_113978_8	chr2	+	3887	1	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	66532	103	3355	-103	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGAAAGTGATTATT	NA	False	NA	8	True	ATTAAA	-18	NA	119794240	119798127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_119794200_119798100
Isoform_113988_8	chr2	+	3049	1	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	67371	102	4194	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGAAAGTGATTATTT	NA	False	NA	9	True	ATTAAA	-19	NA	119795079	119798128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_119795100_119798100
Isoform_114001_4	chr2	-	174	1	Intergenic	novelGene_6510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACTGAAAATGGGGC	NA	False	NA	NA	False	NA	NA	NA	119806748	119806574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119806600_119806700
Isoform_114003_19	chr2	-	152	1	Intergenic	novelGene_6511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGGCTGGAACAAGCAA	6021	False	NA	NA	False	NA	NA	NA	119820354	119820202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_119820200_119820400
Isoform_114004_25	chr2	+	174	1	Intergenic	novelGene_6512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	119836727	119836901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_119836700_119836900
Isoform_114005_27	chr2	+	1469	1	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-5	-1410	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTGTCTCGAAAAACC	NA	False	NA	NA	False	NA	NA	NA	119857979	119859448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_119858000_119859400
Isoform_114008_4	chr2	+	254	1	Intergenic	novelGene_6513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	119996513	119996767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_119996500_119996800
Isoform_114009_3	chr2	+	185	1	Intergenic	novelGene_6514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTTAAAAATCAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	120064770	120064955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_120064800_120065000
Isoform_114013_6	chr2	-	1051	1	ISM	ENSMUSG00000033808.17	ENSMUST00000090042.12	2874	20	47703	4	47703	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTGTCTCTCTCAT	NA	False	NA	NA	False	TATAAA	-10	NA	120186847	120185796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_120185800_120186800
Isoform_114014_7	chr2	-	179	1	Intergenic	novelGene_6515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	120209182	120209003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_120209000_120209200
Isoform_114016_3	chr2	-	1053	1	Intergenic	novelGene_6516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	5517	False	NA	NA	False	NA	NA	NA	120239684	120238631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_120238600_120239700
Isoform_114046_79	chr2	-	178	1	Intergenic	novelGene_6517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120418653	120418475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_120418500_120418700
Isoform_114051_13	chr2	+	178	1	Intergenic	novelGene_6518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120552103	120552281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_120552100_120552300
Isoform_114052_3	chr2	-	2539	1	NIC	ENSMUSG00000027284.17	novel	5996	28	NA	NA	0	-352	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAGGGACAACAA	6114	False	NA	NA	False	AATATA	-23	NA	120561999	120559460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_120559500_120562000
Isoform_114055_5	chr2	+	177	1	Intergenic	novelGene_6519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTCTAGCCAGGC	7661	False	NA	NA	False	NA	NA	NA	120602511	120602688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_120602500_120602700
Isoform_114056_8	chr2	-	172	1	Intergenic	novelGene_6520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTAAAAAAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	120632542	120632370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_120632400_120632500
Isoform_114058_4	chr2	+	3475	1	Antisense	novelGene_ENSMUSG00000027272.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGAGTATGTTCCT	9989	False	NA	NA	False	AATAAA	-21	NA	120702990	120706465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_120703000_120706500
Isoform_114061_5	chr2	-	185	1	Intergenic	novelGene_6521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATAAGCTGGATGTA	NA	False	NA	NA	False	NA	NA	NA	120818591	120818406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_120818400_120818600
Isoform_114063_3	chr2	-	2760	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	-19	315	-19	-315	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTACCTTCTATAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	120971153	120968393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120968400_120971200
Isoform_114065_152	chr2	-	2135	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	-4	925	-4	-925	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGGACCTAAGGGTGAAT	NA	False	NA	-6	True	AATAAA	-17	NA	120971138	120969003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_120969000_120971100
Isoform_114073_17	chr2	+	197	1	Intergenic	novelGene_5993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGTCAGATCATATGAA	NA	False	NA	NA	False	NA	NA	NA	18122321	18122518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_18122300_18122500
Isoform_114078_8	chr2	-	152	1	Intergenic	novelGene_6523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGAAATCTAG	24	False	NA	NA	False	NA	NA	NA	121241809	121241657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_121241700_121241800
Isoform_114079_39	chr2	-	1795	1	Intergenic	novelGene_6524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAGAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	121246922	121245127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_121245100_121246900
Isoform_114081_3	chr2	-	2743	2	NNC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	1621	2265	at_least_one_novel_splicesite	FALSE	non_canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAAGATTTA	1395	False	NA	NA	False	NA	NA	NA	121270011	121267225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_121269073_121269115
Isoform_114090_14	chr2	-	180	1	Intergenic	novelGene_5994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTTCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	18126701	18126521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_18126500_18126700
Isoform_114091_3	chr2	+	270	1	NIC	ENSMUSG00000027242.15	novel	2789	13	NA	NA	-6	-25754	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121337246	121337516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_121337200_121337500
Isoform_114096_10	chr2	+	177	1	Intergenic	novelGene_6525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGATAAAGCAATTA	2479	False	NA	NA	False	NA	NA	NA	121407625	121407802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_121407600_121407800
Isoform_114097_37	chr2	+	177	1	Intergenic	novelGene_6526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACCGTAC	844	False	NA	NA	False	NA	NA	NA	121438769	121438946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_121438800_121438900
Isoform_114101_3	chr2	-	175	1	Intergenic	novelGene_6527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAAACAGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	121701354	121701179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_121701200_121701400
Isoform_114103_8	chr2	+	380	1	Intergenic	novelGene_6528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAATTAAACAACCAAAA	1501	False	NA	NA	False	NA	NA	NA	121720008	121720388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_121720000_121720400
Isoform_114104_10	chr2	+	229	1	Intergenic	novelGene_6529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATAATAAAAACTCTCCT	NA	False	NA	NA	False	NA	NA	NA	121735616	121735845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_121735600_121735800
Isoform_114105_7	chr2	-	158	1	Intergenic	novelGene_6530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAATACT	NA	False	NA	NA	False	NA	NA	NA	121741226	121741068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_121741100_121741200
Isoform_114112_8	chr2	-	291	1	Intergenic	novelGene_6532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	121840109	121839818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_121839800_121840100
Isoform_114121_7	chr2	+	177	1	Intergenic	novelGene_6533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATCTGTTAAAG	NA	False	NA	NA	False	NA	NA	NA	121853271	121853448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_121853300_121853400
Isoform_114124_4	chr2	+	178	1	Intergenic	novelGene_6534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAGACTATCA	NA	False	NA	NA	False	NA	NA	NA	121946910	121947088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_121946900_121947100
Isoform_114125_71	chr2	+	176	1	Intergenic	novelGene_6535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAATAAATGTA	NA	False	NA	NA	False	NA	NA	NA	122012172	122012348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_122012200_122012300
Isoform_114126_71	chr2	+	177	1	Intergenic	novelGene_6536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	122046087	122046264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_122046100_122046300
Isoform_114128_12	chr2	+	181	1	FSM	ENSMUSG00000070692.7	ENSMUST00000117447.2	399	1	235	-17	235	17	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGCCTCACAG	NA	False	NA	-4	True	AATAAA	-17	NA	122050708	122050889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_122050700_122050900
Isoform_114132_34	chr2	-	179	1	Intergenic	novelGene_5937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGTAAAATACAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	4343233	4343054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_4343100_4343200
Isoform_114135_18	chr2	-	175	1	Intergenic	novelGene_6538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTAAAAAGATCTTTAC	NA	False	NA	NA	False	NA	NA	NA	122825323	122825148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_122825100_122825300
Isoform_114137_31	chr2	-	170	1	Intergenic	novelGene_6539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	124908390	124908220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_124908200_124908400
Isoform_114138_3	chr2	+	1708	1	Genic_Genomic	ENSMUSG00000035183.15	novel	NA	NA	NA	NA	6644	29	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACAAAAAACTCACA	NA	False	NA	NA	False	NA	NA	NA	124928918	124930626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_124928900_124930600
Isoform_114143_3	chr2	+	1947	1	Antisense	novelGene_ENSMUSG00000027201.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGACACTGCCTGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	124940890	124942837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_124940900_124942800
Isoform_114144_21	chr2	-	177	1	Intergenic	novelGene_6540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	3706	False	NA	NA	False	NA	NA	NA	125084968	125084791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_125084800_125085000
Isoform_114150_3	chr2	+	1834	1	FSM	ENSMUSG00000091337.4	ENSMUST00000164756.4	1691	1	-145	2	-145	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCTTTGTCTAATAG	NA	False	NA	16	True	AATAAA	-16	NA	125514869	125516703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125514900_125516700
Isoform_114153_27	chr2	+	1658	1	FSM	ENSMUSG00000091337.4	ENSMUST00000164756.4	1691	1	33	0	33	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTTTGTCTAATAGCT	NA	False	NA	18	True	AATAAA	-18	NA	125515047	125516705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_125515000_125516700
Isoform_114158_4	chr2	+	1516	1	Intergenic	novelGene_5995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18252454	18253970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_18252500_18254000
Isoform_114159_3	chr2	+	2019	1	Intergenic	novelGene_6541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	125604476	125606495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_125604500_125606500
Isoform_114160_14	chr2	+	172	1	Intergenic	novelGene_5992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAAATA	8369	False	NA	NA	False	NA	NA	NA	18114093	18114265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_18114100_18114300
Isoform_114161_9	chr2	+	198	1	Intergenic	novelGene_6542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAAGCCTTTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	125641118	125641316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_125641100_125641300
Isoform_114166_11	chr2	-	206	1	Intergenic	novelGene_6543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAGTCCAGATCCATAT	8606	False	NA	NA	False	ATTAAA	-23	NA	125715414	125715208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_125715200_125715400
Isoform_114168_9	chr2	+	178	1	Intergenic	novelGene_6544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACACAATTATG	NA	False	NA	NA	False	NA	NA	NA	126336502	126336680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_126336500_126336700
Isoform_114170_361	chr2	+	192	1	Intergenic	novelGene_6545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	126431358	126431550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_126431400_126431600
Isoform_114172_6	chr8	+	175	1	Intergenic	novelGene_10672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	65511974	65512149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_65512000_65512100
Isoform_114174_4	chr2	+	1674	1	Intergenic	novelGene_6547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-16	NA	126510925	126512599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_126510900_126512600
Isoform_114175_1438	chr2	-	176	1	Intergenic	novelGene_6548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	126521091	126520915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_126520900_126521100
Isoform_114176_9	chr2	-	211	1	Intergenic	novelGene_6549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAACTTTTATTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	126537162	126536951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_126537000_126537200
Isoform_114177_45	chr2	-	406	1	FSM	ENSMUSG00000074846.4	ENSMUST00000188689.2	204	1	-8	-194	-8	194	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATCAGGATGCTA	1781	False	NA	NA	False	NA	NA	NA	126551485	126551079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_126551100_126551500
Isoform_114180_16	chr2	-	229	1	Intergenic	novelGene_6550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTGTAATATACATG	NA	False	NA	NA	False	ATTAAA	-8	NA	126640496	126640267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_126640300_126640500
Isoform_114182_8	chr2	+	1165	1	Antisense	novelGene_ENSMUSG00000027365.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATCATAGGTTCAG	NA	False	NA	NA	False	NA	NA	NA	126663083	126664248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_126663100_126664200
Isoform_114183_15	chr2	-	229	1	Intergenic	novelGene_6551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACTTTACAATGTAGGT	NA	False	NA	NA	False	NA	NA	NA	126687574	126687345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_126687300_126687600
Isoform_114185_36	chr2	-	174	1	Intergenic	novelGene_5938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAAACTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	4364000	4363826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_4363800_4364000
Isoform_114188_30	chr2	-	244	1	Intergenic	novelGene_6552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACATGCAGGGATGTTC	155	False	NA	NA	False	NA	NA	NA	126844274	126844030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_126844000_126844300
Isoform_114190_17	chrX	-	177	1	Intergenic	novelGene_12020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	73360768	73360591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_73360600_73360800
Isoform_114191_4	chr2	-	380	1	Intergenic	novelGene_6553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGCTATATGAC	9589	False	NA	NA	False	NA	NA	NA	126924284	126923904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_126923900_126924300
Isoform_114194_76	chr2	+	173	1	Intergenic	novelGene_6554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAAATTTTGAA	NA	False	NA	NA	False	NA	NA	NA	126988021	126988194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_126988000_126988200
Isoform_114196_3	chr2	-	396	1	NIC	ENSMUSG00000044145.3	novel	1266	2	NA	NA	10	-5308	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGACAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-24	NA	127050190	127049794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_127049800_127050200
Isoform_114197_12	chr2	+	175	1	Intergenic	novelGene_6555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	127054917	127055092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_127054900_127055100
Isoform_114198_8	chr2	-	2051	1	Antisense	novelGene_ENSMUSG00000003660.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127063858	127061807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_127061800_127063900
Isoform_114199_8	chr2	-	2250	1	Antisense	novelGene_ENSMUSG00000003660.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127064056	127061806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_127061800_127064100
Isoform_114202_8	chr2	+	211	1	Intergenic	novelGene_6556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGGTGTTCTTTAGCAT	4371	False	NA	NA	False	NA	NA	NA	127091864	127092075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_127091900_127092100
Isoform_114203_6	chr2	+	171	1	Intergenic	novelGene_5996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAACTACTTTGA	NA	False	NA	NA	False	NA	NA	NA	18349006	18349177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_18349000_18349200
Isoform_114205_38	chr2	-	175	1	Intergenic	novelGene_6557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	127114184	127114009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_127114000_127114200
Isoform_114206_13	chr2	+	167	1	Intergenic	novelGene_6558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAGAATGGAA	NA	False	NA	NA	False	NA	NA	NA	127128032	127128199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_127128000_127128200
Isoform_114211_3	chr2	+	177	1	Intergenic	novelGene_6559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACCCT	8377	False	NA	NA	False	NA	NA	NA	128023562	128023739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_128023600_128023700
Isoform_114212_3	chr2	-	177	1	Intergenic	novelGene_6560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAAAAAAATATGT	5571	False	NA	NA	False	NA	NA	NA	128049393	128049216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_128049200_128049400
Isoform_114213_6	chr2	-	176	1	Intergenic	novelGene_6561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	128138764	128138588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_128138600_128138800
Isoform_114214_5	chr2	-	217	1	Intergenic	novelGene_6562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAGCTAATGTAGGCCT	NA	False	NA	NA	False	NA	NA	NA	128147441	128147224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_128147200_128147400
Isoform_114216_5	chr2	+	162	1	Intergenic	novelGene_6563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	128288022	128288184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_128288000_128288200
Isoform_114218_4	chr2	+	2387	1	Antisense	novelGene_ENSMUSG00000014355.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGACAGACA	NA	False	NA	NA	False	NA	NA	NA	128512317	128514704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_128512300_128514700
Isoform_114219_8	chr2	-	238	1	Intergenic	novelGene_6564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTAGATGCTTCTTA	NA	False	NA	NA	False	AATAAA	-41	NA	128658872	128658634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_128658600_128658900
Isoform_114220_19	chr11	+	176	1	Intergenic	novelGene_2072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97511287	97511463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97511300_97511500
Isoform_114221_8	chr2	+	1919	1	NIC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	10	-29494	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128660232	128662151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_128660200_128662200
Isoform_114222_3	chr2	+	1498	1	Genic_Genomic	ENSMUSG00000051154.12	novel	NA	NA	NA	NA	-172	-688	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGTGACAGCAGATTAT	-5	True	NA	NA	False	AATAAA	-16	NA	18677022	18678520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_18677000_18678500
Isoform_114223_3	chr2	+	3798	1	NIC	ENSMUSG00000051154.12	novel	938	9	NA	NA	1	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCGGCATTCTGTTTGG	61	False	NA	27	True	AATAAA	-21	NA	18677234	18681032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_18677200_18681000
Isoform_114225_5	chr2	-	1860	1	FSM	ENSMUSG00000074807.4	ENSMUST00000238197.2	2540	1	-13	693	-13	395	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGTATTGCTGTTTTC	9110	False	NA	NA	False	AATAAA	-25	NA	128809977	128808117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_128808100_128810000
Isoform_114231_9	chr2	-	178	1	Intergenic	novelGene_6565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAACCAC	NA	False	NA	NA	False	NA	NA	NA	128854895	128854717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_128854700_128854900
Isoform_114233_8	chr2	+	2583	1	NIC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	6	468	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128907910	128910493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_128907900_128910500
Isoform_114235_6	chr2	-	160	1	Intergenic	novelGene_5997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAGATTCTGTATAAG	NA	False	NA	NA	False	AATAAA	-19	NA	18741234	18741074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_18741100_18741200
Isoform_114239_5	chr2	-	253	1	Intergenic	novelGene_6566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAGGAAAAATACAAAAAG	NA	False	NA	NA	False	AATACA	-24	NA	129023023	129022770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_129022800_129023000
Isoform_114242_5	chr2	-	3119	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-9	-1167	-9	1167	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATTTTCTCAGTT	NA	False	NA	NA	False	NA	NA	NA	129041123	129038004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_129038000_129041100
Isoform_114243_5	chr2	-	3167	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-66	-1158	-66	1158	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTTAAAAAATTTATT	NA	False	NA	NA	False	NA	NA	NA	129041180	129038013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_129038000_129041200
Isoform_114244_6	chr2	-	178	1	FSM	ENSMUSG00000103532.2	ENSMUST00000193902.2	1041	1	863	0	863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATTTTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	129038183	129038005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_129038000_129038200
Isoform_114245_41	chr2	-	2008	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-66	1	-66	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATTTGTGAGGAAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	129041180	129039172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_129039200_129041200
Isoform_114246_49	chr2	-	1969	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-27	1	-27	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATTTGTGAGGAAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	129041141	129039172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_129039200_129041100
Isoform_11425_4640	chr11	-	2383	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	207	-2	7	2	multi-exon	FALSE	canonical	3	2776	junction_9	796.06296616144	4640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCCTCTGTTCTCGT	NA	False	NA	-11	True	AATAAA	-25	NA	5049059	5019686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
Isoform_114250_3	chr2	-	644	1	Intergenic	novelGene_6567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8043	False	NA	NA	False	NA	NA	NA	129047770	129047126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_129047100_129047800
Isoform_114253_5	chr2	+	183	1	Intergenic	novelGene_5998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTTTTACAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	18881528	18881711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_18881500_18881700
Isoform_114256_3	chr2	+	895	1	Genic_Genomic	ENSMUSG00000085498.2	novel	NA	NA	NA	NA	-1	-9563	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAATCATGAA	9127	False	NA	NA	False	AAAACA	-42	NA	129139288	129140183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_129139300_129140200
Isoform_114272_6	chr2	+	179	1	Intergenic	novelGene_5999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATAGTACTCATAC	NA	False	NA	NA	False	NA	NA	NA	18969329	18969508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_18969300_18969500
Isoform_114275_4	chr2	-	1062	1	Genic_Genomic	ENSMUSG00000026737.13	novel	NA	NA	NA	NA	-151	-149719	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAAAAAAAGCAACG	NA	False	NA	NA	False	NA	NA	NA	19003088	19002026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_19002000_19003100
Isoform_114276_35	chr2	+	177	1	Intergenic	novelGene_6568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAAAGA	8961	False	NA	NA	False	NA	NA	NA	130286659	130286836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_130286700_130286800
Isoform_114278_37	chr18	-	176	1	Intergenic	novelGene_5339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35014462	35014286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35014300_35014500
Isoform_114281_10	chr2	+	176	1	ISM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	3650	1128	3650	-1128	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2793	False	NA	NA	False	NA	NA	NA	130409311	130409487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_130409300_130409500
Isoform_114287_151	chr2	-	177	1	Intergenic	novelGene_6571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTTTCACCA	NA	False	NA	NA	False	NA	NA	NA	130600600	130600423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_130600400_130600600
Isoform_114288_22	chr2	+	174	1	Intergenic	novelGene_6572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGAACAGGGA	NA	False	NA	NA	False	NA	NA	NA	130603387	130603561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_130603400_130603600
Isoform_114291_224	chr2	+	181	1	Intergenic	novelGene_6000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTTAAAAC	7535	False	NA	NA	False	NA	NA	NA	19308123	19308304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_19308100_19308300
Isoform_114292_127	chr8	+	175	1	Intergenic	novelGene_10488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	11516788	11516963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_11516800_11517000
Isoform_114295_3	chr2	-	3005	1	NIC	ENSMUSG00000027309.19	novel	472	4	NA	NA	32	-90504	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	130748294	130745289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_130745300_130748300
Isoform_114297_8	chr2	-	177	1	Intergenic	novelGene_6574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAACAGACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130789363	130789186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_130789200_130789400
Isoform_114298_6	chr2	+	177	1	ISM	ENSMUSG00000027312.15	ENSMUST00000151364.2	4139	3	931	8159	931	2709	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACACCTATAACT	NA	False	NA	NA	False	NA	NA	NA	130839027	130839204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_130839000_130839200
Isoform_114300_6	chr2	+	170	1	Intergenic	novelGene_6575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTCCTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	130891086	130891256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_130891100_130891300
Isoform_114304_9	chr2	-	199	1	Intergenic	novelGene_6576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAATATGTAGCAATAAG	1858	False	NA	NA	False	NA	NA	NA	131010512	131010313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_131010300_131010500
Isoform_114308_242	chr2	-	2787	1	FSM	ENSMUSG00000068267.6	ENSMUST00000089510.5	4886	1	-10	2109	-10	-2109	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGCATCCTTCATGGT	3156	False	NA	-2	True	AATAAA	-43	NA	131021997	131019210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_131019200_131022000
Isoform_114317_5	chr2	+	3144	1	Genic_Genomic	ENSMUSG00000068264.12	novel	NA	NA	NA	NA	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052290	131055434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_131052300_131055400
Isoform_114324_48	chr1	+	175	1	Intergenic	novelGene_388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132893812	132893987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_132893800_132894000
Isoform_114325_54	chr2	-	3402	2	Antisense	novelGene_ENSMUSG00000027333.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	131366871	131363449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_131365014_131365033
Isoform_114327_3	chr2	-	3029	2	NNC	ENSMUSG00000027339.16	novel	4589	11	NA	NA	25267	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCTGTGGATCTGCTT	9816	False	NA	0	True	AATAAA	-15	NA	131837826	131834771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_131836184_131836209
Isoform_114341_7	chr2	+	177	1	Intergenic	novelGene_5939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	4535900	4536077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_4535900_4536100
Isoform_114342_24	chr2	+	205	1	Intergenic	novelGene_6001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACCAAGCATACTTTAG	NA	False	NA	NA	False	NA	NA	NA	19410980	19411185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_19411000_19411200
Isoform_114343_5	chr2	-	173	1	Intergenic	novelGene_6577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAGAAACAGG	8931	False	NA	NA	False	NA	NA	NA	131998536	131998363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_131998400_131998500
Isoform_114344_3	chr2	+	157	1	Intergenic	novelGene_6578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTGCTAACACACCTG	5419	False	NA	NA	False	NA	NA	NA	132012215	132012372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_132012200_132012400
Isoform_114347_3	chr2	-	173	1	Intergenic	novelGene_6579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGACTGTTCAT	9576	False	NA	NA	False	NA	NA	NA	132046359	132046186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_132046200_132046400
Isoform_114355_12	chr2	+	2781	1	Genic_Genomic	ENSMUSG00000087377.2	novel	NA	NA	NA	NA	-551	-5747	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAACATGGGAGCT	-6	True	NA	NA	False	NA	NA	NA	132094725	132097506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_132094700_132097500
Isoform_114356_4	chr2	+	2522	1	Genic_Genomic	ENSMUSG00000087377.2	novel	NA	NA	NA	NA	-589	-6044	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATACAATTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	132094687	132097209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_132094700_132097200
Isoform_114357_14	chr2	+	780	1	Genic_Genomic	ENSMUSG00000087377.2	novel	NA	NA	NA	NA	-547	-7744	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCCCCCCATTTCATAT	-2	True	NA	NA	False	AATAAA	-27	NA	132094729	132095509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_132094700_132095500
Isoform_114360_14	chr2	-	177	1	Intergenic	novelGene_6580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAGAAGAA	9883	False	NA	NA	False	NA	NA	NA	132108638	132108461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_132108500_132108600
Isoform_114361_152	chr2	-	178	1	Intergenic	novelGene_6581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGATTCTACCTT	NA	False	NA	NA	False	NA	NA	NA	132131034	132130856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_132130900_132131000
Isoform_114362_3	chr2	+	6152	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	42751	0	4603	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	132147818	132153970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_132147800_132154000
Isoform_114363_3	chr2	+	1631	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	42843	4429	4695	2293	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	NA	False	NA	20	True	AATAAA	-25	NA	132147910	132149541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_132147900_132149500
Isoform_114365_4	chr2	+	1249	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	43223	4431	5075	2291	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCCCGTGTTTGTCACT	NA	False	NA	18	True	AATAAA	-23	NA	132148290	132149539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_132148300_132149500
Isoform_114367_3	chr2	+	5175	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	43728	0	5580	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	132148795	132153970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_132148800_132154000
Isoform_114368_3	chr2	+	5096	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	43807	0	5659	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	132148874	132153970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_132148900_132154000
Isoform_114369_6	chr2	+	4922	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	43979	2	5831	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGCGTGTTTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	132149046	132153968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_132149000_132154000
Isoform_114377_8	chr2	+	2667	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	46236	0	8088	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	132151303	132153970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_132151300_132154000
Isoform_114384_14	chr2	-	179	1	Intergenic	novelGene_6002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCC	5958	False	NA	NA	False	NA	NA	NA	19541343	19541164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_19541200_19541300
Isoform_114385_5	chr2	+	340	1	Intergenic	novelGene_6582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132525836	132526176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_132525800_132526200
Isoform_114386_3	chr2	-	307	1	Intergenic	novelGene_6583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	132581627	132581320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_132581300_132581600
Isoform_114390_9	chr2	+	2899	1	FSM	ENSMUSG00000043415.6	ENSMUST00000052168.6	2832	1	-69	2	-69	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTTTCTGGGTAGAGTG	2431	False	NA	2	True	AATAAA	-13	NA	19662493	19665392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_19662500_19665400
Isoform_114391_66	chr2	+	2852	1	FSM	ENSMUSG00000043415.6	ENSMUST00000052168.6	2832	1	-21	1	-21	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTCTGGGTAGAGTGG	2479	False	NA	3	True	AATAAA	-14	NA	19662541	19665393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_19662500_19665400
Isoform_114392_5	chr2	+	3546	1	FSM	ENSMUSG00000043415.6	ENSMUST00000052168.6	2832	1	-21	-693	-21	693	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCAGTTTCAAGTGTTT	2479	False	NA	NA	False	NA	NA	NA	19662541	19666087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_19662500_19666100
Isoform_114399_15	chr2	+	210	1	Intergenic	novelGene_6584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCAAGCCTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	134371663	134371873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_134371700_134371900
Isoform_114401_228	chr2	-	1580	1	FSM	ENSMUSG00000083879.5	ENSMUST00000121500.2	807	1	-18	-755	-18	755	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	134605568	134603988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_134604000_134605600
Isoform_114404_4	chr2	+	322	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	276	-118	276	118	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	134646144	134646466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_134646100_134646500
Isoform_114406_18	chr2	+	178	1	Intergenic	novelGene_6585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	135275062	135275240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_135275100_135275200
Isoform_114408_10	chr2	+	522	1	Intergenic	novelGene_6586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAGGAAAGAGAAACA	NA	False	NA	NA	False	NA	NA	NA	135488443	135488965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_135488400_135489000
Isoform_114409_10	chr2	-	180	1	Intergenic	novelGene_6587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAACGACAGGAGTTGGA	NA	False	NA	NA	False	NA	NA	NA	135489607	135489427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_135489400_135489600
Isoform_114410_169	chr2	+	173	1	Intergenic	novelGene_6003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTAAAAAGTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	20162153	20162326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_20162200_20162300
Isoform_114416_3	chr2	+	156	1	Intergenic	novelGene_6588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATATAATATACTATAATA	NA	False	NA	NA	False	NA	NA	NA	139887325	139887481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_139887300_139887500
Isoform_114417_3	chr2	-	4920	1	NIC	ENSMUSG00000039033.12	novel	2258	14	NA	NA	-3	-85337	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTAGTGGGAAAATGAG	NA	False	NA	NA	False	AAAAAG	-11	NA	139908708	139903788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_139903800_139908700
Isoform_114423_46	chr2	+	182	1	Intergenic	novelGene_6004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGATTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	20462721	20462903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_20462700_20462900
Isoform_114425_55	chr2	-	176	1	Intergenic	novelGene_6589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	140050149	140049973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_140050000_140050100
Isoform_114426_18	chr2	-	158	1	Intergenic	novelGene_6590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAGTAAATCTTTA	937	False	NA	NA	False	NA	NA	NA	140169611	140169453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_140169500_140169600
Isoform_114427_18	chr11	+	158	1	Intergenic	novelGene_1765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	76036610	76036768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76036600_76036800
Isoform_114429_4	chr2	-	4231	1	NIC	ENSMUSG00000051379.13	novel	3977	3	NA	NA	7	-7907	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140513382	140509151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_140509200_140513400
Isoform_114431_31	chr2	+	175	1	Intergenic	novelGene_6591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTATTT	NA	False	NA	NA	False	NA	NA	NA	141412428	141412603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_141412400_141412600
Isoform_114433_3	chr2	+	3973	2	Antisense	novelGene_ENSMUSG00000038844.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142468747	142472740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_142469334_142469353
Isoform_114438_117	chr11	+	176	1	Intergenic	novelGene_1316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4537931	4538107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4537900_4538100
Isoform_114449_19	chr18	-	916	1	FSM	ENSMUSG00000091957.4	ENSMUST00000076842.7	879	1	-10	-27	1	27	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTAAGTCTGCTGAAAA	7424	False	NA	NA	False	AATAAA	-1	NA	61393042	61392126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61392100_61393000
Isoform_114451_6	chr2	+	429	1	Intergenic	novelGene_6594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGGGTTTAAAGTC	1069	False	NA	NA	False	NA	NA	NA	143991091	143991520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_143991100_143991500
Isoform_114453_3	chr2	+	2580	1	Intergenic	novelGene_6595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAATTGCCTTAGCTCC	5660	False	NA	NA	False	NA	NA	NA	143995682	143998262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_143995700_143998300
Isoform_114455_4	chr8	-	1764	1	Intergenic	novelGene_11070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAAATTGCCTTAGCT	NA	False	NA	NA	False	NA	NA	NA	129474816	129473052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_129473100_129474800
Isoform_114461_7	chr2	+	158	1	Intergenic	novelGene_6597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	144022057	144022215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_144022100_144022200
Isoform_114464_35	chr2	-	3759	1	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-9	2419	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144112713	144108954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_144109000_144112700
Isoform_114467_10	chr2	-	176	1	Intergenic	novelGene_6598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	144120611	144120435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_144120400_144120600
Isoform_114468_6	chr2	-	172	1	Intergenic	novelGene_6599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAAATT	7089	False	NA	NA	False	NA	NA	NA	144151301	144151129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_144151100_144151300
Isoform_114472_7	chr17	+	171	1	Intergenic	novelGene_5008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	46869876	46870047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_46869900_46870000
Isoform_114473_10	chr2	-	177	1	Intergenic	novelGene_6600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	144395578	144395401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_144395400_144395600
Isoform_114476_3	chr2	+	1112	1	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	-26	-38537	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAG	NA	False	NA	NA	False	GGGGCT	-24	NA	145517260	145518372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_145517300_145518400
Isoform_114480_5	chr2	-	1034	1	Antisense	novelGene_ENSMUSG00000002728.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACACATTTCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	145751336	145750302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_145750300_145751300
Isoform_114482_19	chr2	+	172	1	Intergenic	novelGene_6601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTGTG	NA	False	NA	NA	False	NA	NA	NA	145917402	145917574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_145917400_145917600
Isoform_114483_75	chr2	-	222	1	Intergenic	novelGene_6602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATGGTGACTTTAGC	NA	False	NA	NA	False	NA	NA	NA	146047392	146047170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_146047200_146047400
Isoform_114486_3	chr2	+	219	1	Intergenic	novelGene_6603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTTTTTTGAGACA	NA	False	NA	NA	False	ACTAAA	-21	NA	146381536	146381755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_146381500_146381800
Isoform_114488_13	chr2	+	190	1	Intergenic	novelGene_6604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCATCTTTCAATAATAT	NA	False	NA	NA	False	NA	NA	NA	146833485	146833675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_146833500_146833700
Isoform_114489_9	chr2	-	174	1	Intergenic	novelGene_6605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAGAGATGGAA	NA	False	NA	NA	False	NA	NA	NA	146851561	146851387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_146851400_146851600
Isoform_114490_32	chr2	-	5032	1	Intergenic	novelGene_6606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146861713	146856681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_146856700_146861700
Isoform_114493_9	chr2	+	174	1	Intergenic	novelGene_6607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAAGTGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	148243136	148243310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_148243100_148243300
Isoform_114494_6	chr2	-	3688	1	FSM	ENSMUSG00000074743.5	ENSMUST00000099270.5	3723	1	35	0	35	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCATCTCCTTCTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	148250073	148246385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_148246400_148250100
Isoform_114496_10	chr2	+	1169	1	NIC	ENSMUSG00000036992.11	novel	1116	3	NA	NA	30	-2203	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	148514575	148515744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_148514600_148515700
Isoform_114500_7	chr2	+	175	1	Intergenic	novelGene_6608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGACACTGATAT	NA	False	NA	NA	False	NA	NA	NA	150020121	150020296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_150020100_150020300
Isoform_114501_7	chr2	+	172	1	Intergenic	novelGene_6005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAGTCTTTAAAAAAAAAA	394	False	NA	NA	False	NA	NA	NA	20672263	20672435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_20672300_20672400
Isoform_114502_5	chr2	+	178	1	Intergenic	novelGene_6609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATATCT	NA	False	NA	NA	False	NA	NA	NA	150136865	150137043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_150136900_150137000
Isoform_114503_5	chr2	+	187	1	Intergenic	novelGene_6610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAACTAAGTTTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	150138092	150138279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_150138100_150138300
Isoform_114504_4	chr2	-	199	1	Intergenic	novelGene_6611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAGAAGAAAACCGGA	NA	False	NA	NA	False	NA	NA	NA	150154414	150154215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_150154200_150154400
Isoform_114507_3	chr2	+	155	1	Intergenic	novelGene_6612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	11	True	NA	NA	NA	150203565	150203720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_150203600_150203700
Isoform_114510_5	chr2	+	251	1	Intergenic	novelGene_6613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCCCATATCAGACCC	NA	False	NA	NA	False	NA	NA	NA	150474317	150474568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_150474300_150474600
Isoform_114511_3	chr7	-	154	1	Intergenic	novelGene_9990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATATAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	35416658	35416504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_35416500_35416700
Isoform_114520_7	chr2	-	2190	1	Intergenic	novelGene_6614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTATTTGGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	150545805	150543615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_150543600_150545800
Isoform_11455_2109	chr11	-	2393	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	3	1342	junction_9	1044.5656674397	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCCTCTGTTCTCGTG	NA	False	NA	-10	True	AATAAA	-26	NA	5049065	5019685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
Isoform_114551_8	chr2	-	176	1	Intergenic	novelGene_6615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGCAGAAAAGAATC	5833	False	NA	NA	False	NA	NA	NA	150602698	150602522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_150602500_150602700
Isoform_114552_50	chr2	-	175	1	Intergenic	novelGene_6616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAGAACAAAA	5784	False	NA	NA	False	NA	NA	NA	150632317	150632142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_150632100_150632300
Isoform_114553_258	chr16	+	178	1	Intergenic	novelGene_4280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8550266	8550444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_8550300_8550400
Isoform_114554_4	chr2	+	3389	2	Antisense	novelGene_ENSMUSG00000032046.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	150735742	150739157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_150735921_150735946
Isoform_114558_6	chr2	-	3659	1	NIC	ENSMUSG00000068115.14	novel	658	5	NA	NA	20	-61581	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	150881282	150877623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_150877600_150881300
Isoform_114559_20	chr2	-	172	1	Intergenic	novelGene_6006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTTC	NA	False	NA	NA	False	NA	NA	NA	20711529	20711357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_20711400_20711500
Isoform_114564_43	chr9	+	176	1	Intergenic	novelGene_11607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTTTTTTTCCCGTA	NA	False	NA	NA	False	NA	NA	NA	100580813	100580989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_100580800_100581000
Isoform_114565_3	chr2	-	4510	1	Antisense	novelGene_ENSMUSG00000036617.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCGTGTAAGAAAAAGACAAG	NA	False	NA	NA	False	NA	NA	NA	20731602	20727092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_20727100_20731600
Isoform_114566_8	chr2	+	183	1	Intergenic	novelGene_6619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAAGCACC	NA	False	NA	NA	False	NA	NA	NA	151791852	151792035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_151791900_151792000
Isoform_114567_3	chr2	-	1568	1	NIC	ENSMUSG00000027459.17	novel	1853	2	NA	NA	2427	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTTGGACTCTTCTCT	NA	False	NA	-3	True	AATAAA	-20	NA	151812887	151811319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_151811300_151812900
Isoform_114568_17	chr2	+	176	1	Intergenic	novelGene_6620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	151856970	151857146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_151857000_151857100
Isoform_114569_39	chr2	-	177	1	Intergenic	novelGene_6621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGGTGCACCAC	NA	False	NA	NA	False	NA	NA	NA	151905621	151905444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_151905400_151905600
Isoform_114570_5	chr2	+	204	1	Intergenic	novelGene_6007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTGCCATTCA	9602	False	NA	NA	False	AAGAAA	-7	NA	20734156	20734360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_20734200_20734400
Isoform_114571_6	chr2	+	176	1	Intergenic	novelGene_6622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGATTCTGGGCC	NA	False	NA	NA	False	NA	NA	NA	151927958	151928134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_151928000_151928100
Isoform_114580_5	chr2	+	540	1	Intergenic	novelGene_6623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152019652	152020192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_152019700_152020200
Isoform_114581_7	chr2	-	304	1	FSM	ENSMUSG00000081087.2	ENSMUST00000117430.2	392	1	125	-37	125	37	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTGGTCTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	152027477	152027173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152027200_152027500
Isoform_114585_16	chr2	-	173	1	Intergenic	novelGene_6624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152072577	152072404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_152072400_152072600
Isoform_114588_13	chr2	-	176	1	Intergenic	novelGene_6625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	152117817	152117641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_152117600_152117800
Isoform_114616_3	chr2	+	190	1	Intergenic	novelGene_6626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAATATTAAAATATCAAT	NA	False	NA	NA	False	NA	NA	NA	152159912	152160102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_152159900_152160100
Isoform_114622_224	chr2	+	178	1	Intergenic	novelGene_6627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152196675	152196853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_152196700_152196900
Isoform_114623_13	chr2	-	176	1	Intergenic	novelGene_6628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	152234130	152233954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_152234000_152234100
Isoform_114625_7	chr2	-	4568	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	-118	3	-118	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCAGTCTTGGTGTTGT	NA	False	NA	-6	True	NA	NA	NA	152240101	152235533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152235500_152240100
Isoform_114626_138	chr2	-	2852	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	311	1290	294	-1287	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCCTGTGGTTCTGCAT	NA	False	NA	-5	True	AATAAA	-17	NA	152239672	152236820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152236800_152239700
Isoform_114629_91	chr2	-	3273	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	-111	1291	-111	-1288	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCCCTGTGGTTCTGCA	NA	False	NA	-6	True	AATAAA	-16	NA	152240094	152236821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152236800_152240100
Isoform_114641_614	chr2	-	2837	1	FSM	ENSMUSG00000074682.5	ENSMUST00000099207.5	3073	1	236	0	236	0	mono-exon	FALSE	NA	NA	NA	NA	NA	614	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	152256711	152253874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152253900_152256700
Isoform_114644_69	chr2	-	2895	1	FSM	ENSMUSG00000074682.5	ENSMUST00000099207.5	3073	1	178	0	178	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	152256769	152253874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152253900_152256800
Isoform_114651_68	chr2	-	3053	1	FSM	ENSMUSG00000074682.5	ENSMUST00000099207.5	3073	1	20	0	20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	152256927	152253874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152253900_152256900
Isoform_114652_24	chr2	-	3101	1	FSM	ENSMUSG00000074682.5	ENSMUST00000099207.5	3073	1	-29	1	-29	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGTGTATTTTTTTTT	NA	False	NA	-3	True	AATAAA	-15	NA	152256976	152253875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_152253900_152257000
Isoform_114663_13	chr2	-	187	1	Intergenic	novelGene_6629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATCAAAATAAATAG	NA	False	NA	NA	False	NA	NA	NA	152266333	152266146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_152266100_152266300
Isoform_114666_149	chr2	+	177	1	Intergenic	novelGene_6630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATATTTATTTTTTTA	3714	False	NA	2	True	NA	NA	NA	152419482	152419659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_152419500_152419700
Isoform_114672_9	chr2	+	178	1	Intergenic	novelGene_6631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	152515567	152515745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_152515600_152515700
Isoform_114673_11	chr2	+	907	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAAATCGGGGTGTT	NA	False	NA	96	True	AATAAA	-18	NA	152528954	152529861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152529000_152529900
Isoform_114676_67	chr2	+	773	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	134	5	134	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAAATCGGGGTGTT	NA	False	NA	96	True	AATAAA	-18	NA	152529088	152529861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152529100_152529900
Isoform_114677_67	chr2	+	692	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	136	84	136	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTGTGTCTGTATG	NA	False	NA	17	True	TATAAA	-13	NA	152529090	152529782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_152529100_152529800
Isoform_114678_3	chr2	+	5530	1	Intergenic	novelGene_6632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTGCGCTTCCAGG	NA	False	NA	NA	False	NA	NA	NA	152638703	152644233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_152638700_152644200
Isoform_114684_18	chr2	+	175	1	Intergenic	novelGene_6634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	675	False	NA	NA	False	NA	NA	NA	153015281	153015456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_153015300_153015500
Isoform_114689_42	chr2	-	3064	1	FSM	ENSMUSG00000074671.7	ENSMUST00000099194.4	3072	1	1	7	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATTTAGGTCATATT	NA	False	NA	NA	False	AATAAA	-20	NA	153067360	153064296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_153064300_153067400
Isoform_114695_35	chr2	-	221	1	Intergenic	novelGene_6635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGATTCTGCTTTTTCT	NA	False	NA	NA	False	AAAAAG	-13	NA	153123558	153123337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_153123300_153123600
Isoform_114696_3	chr2	+	228	1	Intergenic	novelGene_6636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAACTAATGAAAATGAG	6264	False	NA	NA	False	NA	NA	NA	153131783	153132011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_153131800_153132000
Isoform_114700_9	chr2	-	4905	1	Genic_Genomic	ENSMUSG00000073236.5	novel	NA	NA	NA	NA	-323	-335	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACTTGCTAAAA	8689	False	NA	NA	False	NA	NA	NA	153188316	153183411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_153183400_153188300
Isoform_114701_5	chr2	+	173	1	Intergenic	novelGene_6637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAAAGATAGT	2017	False	NA	NA	False	NA	NA	NA	153193818	153193991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_153193800_153194000
Isoform_114703_3	chr2	-	2813	1	Antisense	novelGene_ENSMUSG00000042548.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153198508	153195695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_153195700_153198500
Isoform_114704_9	chr2	+	176	1	Intergenic	novelGene_6638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9348	False	NA	NA	False	NA	NA	NA	153201149	153201325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_153201100_153201300
Isoform_114706_4	chr2	-	2969	1	Intergenic	novelGene_6008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20824856	20821887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_20821900_20824900
Isoform_114707_5	chr2	-	1002	1	Antisense	novelGene_ENSMUSG00000042548.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAAAAG	422	False	NA	NA	False	NA	NA	NA	153241294	153240292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_153240300_153241300
Isoform_114720_15	chr2	+	2472	1	Intergenic	novelGene_6639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	153256052	153258524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_153256100_153258500
Isoform_114721_74	chr2	-	176	1	Genic_Genomic	ENSMUSG00000061411.13	novel	NA	NA	NA	NA	-8469	24	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153295970	153295794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_153295800_153296000
Isoform_114722_57	chr2	+	173	1	Intergenic	novelGene_6009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	20835311	20835484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_20835300_20835500
Isoform_114724_17	chr2	+	176	1	Intergenic	novelGene_6640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAAAAACTCAA	NA	False	NA	NA	False	NA	NA	NA	153404911	153405087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_153404900_153405100
Isoform_114725_34	chr2	-	223	1	Intergenic	novelGene_6641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCCCAGAACCCAGGTAA	NA	False	NA	NA	False	NA	NA	NA	153433474	153433251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_153433300_153433500
Isoform_114726_5	chr2	+	175	1	Antisense	novelGene_ENSMUSG00000056941.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGTGGGAA	NA	False	NA	NA	False	NA	NA	NA	153459171	153459346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_153459200_153459300
Isoform_114729_12	chr2	-	157	1	Intergenic	novelGene_6642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	153572772	153572615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_153572600_153572800
Isoform_114739_7	chr2	+	791	1	FSM	ENSMUSG00000083097.4	ENSMUST00000118786.2	435	1	129	-485	129	485	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTCCATGACCAAGATA	NA	False	NA	NA	False	NA	NA	NA	153668219	153669010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_153668200_153669000
Isoform_114748_13	chr2	+	175	1	Antisense	novelGene_ENSMUSG00000027487.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTAGAAAAACAAACAA	786	False	NA	NA	False	NA	NA	NA	154214891	154215066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_154214900_154215100
Isoform_114749_12	chr19	+	173	1	Intergenic	novelGene_5606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAACTATTATGT	3850	False	NA	NA	False	NA	NA	NA	5557216	5557389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_5557200_5557400
Isoform_114751_118	chr2	+	174	1	Intergenic	novelGene_6644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	154237379	154237553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154237400_154237600
Isoform_114752_25	chr2	-	157	1	Intergenic	novelGene_6645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154255291	154255134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_154255100_154255300
Isoform_114754_7	chr2	-	898	1	Intergenic	novelGene_6646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	AAAAAG	-8	NA	154263234	154262336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_154262300_154263200
Isoform_114760_11	chr2	-	2084	1	Intergenic	novelGene_6647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	154288412	154286328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_154286300_154288400
Isoform_114761_18	chr2	+	178	1	Intergenic	novelGene_6648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGATCAAAAT	NA	False	NA	NA	False	NA	NA	NA	154292736	154292914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154292700_154292900
Isoform_114764_4	chr2	-	288	1	Intergenic	novelGene_6649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	154374657	154374369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_154374400_154374700
Isoform_114786_28	chr2	-	2366	1	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	-7854	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAATAATTTTAAAA	9541	False	NA	NA	False	NA	NA	NA	154411773	154409407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_154409400_154411800
Isoform_114788_9	chr2	+	161	1	Intergenic	novelGene_6650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154421761	154421922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154421800_154421900
Isoform_114790_29	chr2	+	174	1	Intergenic	novelGene_6651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGGGGGGGGGGG	6243	False	NA	NA	False	NA	NA	NA	154442710	154442884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154442700_154442900
Isoform_114791_3	chr2	-	312	1	Antisense	novelGene_ENSMUSG00000038467.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCAGCTGGGCCCGGCCGC	NA	False	NA	NA	False	NA	NA	NA	154499286	154498974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_154499000_154499300
Isoform_114792_6	chr2	+	182	1	Intergenic	novelGene_6652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTTTGAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	154515119	154515301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154515100_154515300
Isoform_114793_115	chr2	+	180	1	Intergenic	novelGene_6653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGATGACAAA	NA	False	NA	NA	False	NA	NA	NA	154520610	154520790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154520600_154520800
Isoform_114796_52	chr2	-	158	2	Intergenic	novelGene_6654	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	154589795	154589616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_154589705_154589725
Isoform_114797_549	chr2	+	170	1	Intergenic	novelGene_6655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	549	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTTAAAAAAAAAAAAGA	4652	False	NA	NA	False	NA	NA	NA	154608675	154608845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154608700_154608800
Isoform_114799_3	chr2	-	177	1	Intergenic	novelGene_6656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATTTAAATCTG	3140	False	NA	NA	False	NA	NA	NA	154629512	154629335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_154629300_154629500
Isoform_1148_293	SIRV6	+	1310	6	FSM	SIRV6A	SIRV613	1311	6	1	0	1	0	multi-exon	FALSE	canonical	3	472	junction_2	9686.74001715748	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3106	11824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
Isoform_114801_11	chr2	-	245	1	Intergenic	novelGene_6657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGGAGCAGGCGCTGA	NA	False	NA	NA	False	NA	NA	NA	154667575	154667330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_154667300_154667600
Isoform_114803_3	chr2	-	177	1	Intergenic	novelGene_6010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGAGTAAGCTA	NA	False	NA	NA	False	NA	NA	NA	20956795	20956618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_20956600_20956800
Isoform_114804_3	chr17	+	176	1	Intergenic	novelGene_5092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	66085950	66086126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_66086000_66086100
Isoform_114805_4	chr2	-	179	1	Intergenic	novelGene_6658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	5742	False	NA	NA	False	NA	NA	NA	154685513	154685334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_154685300_154685500
Isoform_11481_26	chr11	-	1943	15	FSM	ENSMUSG00000034164.18	ENSMUST00000062821.13	1947	15	4	0	4	0	multi-exon	TRUE	canonical	3	8	junction_2	4.11815294439988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCTTGGTCTCTATGTG	7866	False	NA	NA	False	AATAAA	-19	NA	5102253	5056264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5056970_5060689_5060775_5066879_5066925_5078869_5078915_5079008_5079072_5079427_5079481_5079621_5079721_5080631_5080779_5081481_5081572_5081919_5082041_5084348_5084411_5085353_5085432_5093826_5093931_5094294_5094409_5102121
Isoform_114811_4	chr2	+	176	1	Intergenic	novelGene_6659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	154768633	154768809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154768600_154768800
Isoform_114813_62	chr14	-	176	1	Intergenic	novelGene_3640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGACTGTGAG	NA	False	NA	NA	False	NA	NA	NA	71062364	71062188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_71062200_71062400
Isoform_114815_4	chr2	+	208	1	Intergenic	novelGene_6661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAAGAAAGCA	7652	False	NA	NA	False	NA	NA	NA	154900674	154900882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154900700_154900900
Isoform_11482_3	chr11	-	2583	10	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-110	-2345	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.262151374893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACCGCGAGTTTTGTC	NA	False	NA	NA	False	TTTAAA	-10	NA	5211668	5143896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_5144108_5144145_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
Isoform_114822_6	chr2	+	1809	1	Genic_Genomic	ENSMUSG00000075514.5	novel	NA	NA	NA	NA	-520	345	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTACTACTGTATATTT	3089	False	NA	2	True	AATAAA	-13	NA	20973344	20975153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_20973300_20975200
Isoform_114823_40	chr2	+	180	1	Intergenic	novelGene_6662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	154918977	154919157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154919000_154919200
Isoform_114824_25	chr2	+	172	1	Intergenic	novelGene_6663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATCTTTAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	154926990	154927162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154927000_154927200
Isoform_114825_8	chr2	+	154	1	Intergenic	novelGene_6664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGATTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	154957917	154958071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_154957900_154958100
Isoform_114826_12	chr2	+	209	1	Intergenic	novelGene_6665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAAGTTTCCTTATTTT	1652	False	NA	NA	False	NA	NA	NA	155015211	155015420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155015200_155015400
Isoform_114827_35	chr2	+	186	1	ISM	ENSMUSG00000027598.17	ENSMUST00000138468.8	3711	6	43425	13	43388	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAATAATGTTTAAAAT	5309	False	NA	NA	False	NA	NA	NA	155018868	155019054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_155018900_155019100
Isoform_11483_101	chr11	-	4939	9	FSM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	-86	3	-86	-3	multi-exon	FALSE	canonical	3	45	junction_1	7.36121593216773	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGGTGAGGCCAGGC	NA	False	NA	-7	True	AATAAA	-18	NA	5211644	5141554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
Isoform_114830_19	chr2	+	173	1	Intergenic	novelGene_6666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACTGGCGC	1466	False	NA	NA	False	NA	NA	NA	155134992	155135165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155135000_155135200
Isoform_114831_23	chr2	+	1455	1	Intergenic	novelGene_6667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACCCTGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155153187	155154642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155153200_155154600
Isoform_114832_5	chr2	+	172	1	Intergenic	novelGene_6668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155186178	155186350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155186200_155186400
Isoform_114833_3	chr2	-	155	1	Intergenic	novelGene_6011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAAACTCTTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	21003394	21003239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_21003200_21003400
Isoform_114834_6	chr2	+	232	1	Intergenic	novelGene_6669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTATAGGGAGAACTGT	2669	False	NA	NA	False	NA	NA	NA	155202286	155202518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155202300_155202500
Isoform_114835_29	chr5	-	177	1	Intergenic	novelGene_9017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTGGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	135440772	135440595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135440600_135440800
Isoform_114836_23	chr2	+	174	1	Intergenic	novelGene_6671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCGGAGCAAGACGACC	8899	False	NA	NA	False	NA	NA	NA	155208516	155208690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155208500_155208700
Isoform_114837_56	chr2	-	189	1	Intergenic	novelGene_6672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTTTAAAGGAGATT	NA	False	NA	NA	False	NA	NA	NA	155210811	155210622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_155210600_155210800
Isoform_114838_5	chr2	+	2284	1	NIC	ENSMUSG00000038375.16	novel	3979	4	NA	NA	0	-1833	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	4067	False	NA	NA	False	NA	NA	NA	155223759	155226043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_155223800_155226000
Isoform_114841_39	chr2	-	176	1	Intergenic	novelGene_6673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGGAAAGAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	155234767	155234591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_155234600_155234800
Isoform_114842_12	chr2	-	175	1	Intergenic	novelGene_6674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATAAAACGCCTG	NA	False	NA	NA	False	NA	NA	NA	155283666	155283491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_155283500_155283700
Isoform_114844_29	chr2	+	181	1	Intergenic	novelGene_6675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATCTCTTAATTA	NA	False	NA	NA	False	NA	NA	NA	155321721	155321902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155321700_155321900
Isoform_114847_9	chr2	+	171	1	Antisense	novelGene_ENSMUSG00000038324.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAAAAAAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	155486474	155486645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_155486500_155486600
Isoform_114848_3	chr2	+	160	1	Intergenic	novelGene_6676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155489631	155489791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155489600_155489800
Isoform_114849_52	chr14	-	177	1	Intergenic	novelGene_3405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATGAAGAC	9971	False	NA	NA	False	NA	NA	NA	21838876	21838699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_21838700_21838900
Isoform_114851_60	chr6	+	176	1	Intergenic	novelGene_9187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12831373	12831549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_12831400_12831500
Isoform_114853_6	chr2	+	178	1	Intergenic	novelGene_6678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	155766901	155767079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155766900_155767100
Isoform_114854_5	chr2	+	167	1	Intergenic	novelGene_6679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAGACATG	NA	False	NA	NA	False	NA	NA	NA	155769155	155769322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155769200_155769300
Isoform_114857_9	chr2	-	167	1	Intergenic	novelGene_6680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGGATTTATATTTTCT	NA	False	NA	NA	False	NA	NA	NA	155870194	155870027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_155870000_155870200
Isoform_114858_6	chr2	+	176	1	Intergenic	novelGene_6681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTGA	3586	False	NA	NA	False	NA	NA	NA	155872822	155872998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155872800_155873000
Isoform_114859_6	chr2	-	176	1	Intergenic	novelGene_6682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAACCTGTAATTTTG	NA	False	NA	NA	False	NA	NA	NA	155906785	155906609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_155906600_155906800
Isoform_114867_7	chr2	+	1818	1	Intergenic	novelGene_6683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155948438	155950256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155948400_155950300
Isoform_114869_14	chr2	+	203	1	Intergenic	novelGene_6012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGCTTCAACTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	21772037	21772240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_21772000_21772200
Isoform_11487_4	chr11	-	2198	5	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	-72	16919	-72	-3638	5prime_fragment	FALSE	canonical	3	52	junction_1	5.04975246918104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGGTCTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	5211630	5158470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
Isoform_114871_22	chr2	-	234	1	Intergenic	novelGene_6684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGATTTTTACAGTAA	5248	False	NA	NA	False	NA	NA	NA	155974207	155973973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_155974000_155974200
Isoform_114873_112	chr2	+	180	1	Intergenic	novelGene_6685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATAACTGAT	3323	False	NA	NA	False	NA	NA	NA	155982930	155983110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155982900_155983100
Isoform_11488_7	chr11	-	3361	9	FSM	ENSMUSG00000041961.15	ENSMUST00000109867.8	6311	9	9	2941	9	-663	multi-exon	FALSE	canonical	3	15	junction_1	9.67923034130297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGTTGTCTCCCTGGA	6441	False	NA	NA	False	ATTAAA	-19	NA	5394838	5229264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5229762_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
Isoform_114880_13	chr2	+	217	1	Intergenic	novelGene_6686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGACTA	NA	False	NA	NA	False	TATAAA	-14	NA	156001909	156002126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156001900_156002100
Isoform_114882_23	chr2	+	195	1	Intergenic	novelGene_6687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGGTGTGCTTAGTAAA	5033	False	NA	NA	False	NA	NA	NA	156013146	156013341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156013100_156013300
Isoform_114886_4	chr2	-	187	1	Intergenic	novelGene_6689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGCCGAGATTGCTG	NA	False	NA	NA	False	NA	NA	NA	156041152	156040965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_156041000_156041200
Isoform_114888_966	chr2	-	194	1	Intergenic	novelGene_6690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	966	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGCAATCTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	156058643	156058449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_156058400_156058600
Isoform_114890_3	chr2	-	251	1	Intergenic	novelGene_6691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTAAACTGCCCCTT	NA	False	NA	21	True	NA	NA	NA	156083425	156083174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_156083200_156083400
Isoform_114891_3	chr2	-	187	1	Intergenic	novelGene_6692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGACTGGACAGGC	NA	False	NA	-43	True	NA	NA	NA	156083425	156083238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_156083200_156083400
Isoform_114892_4	chr2	+	174	1	Intergenic	novelGene_6013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAGTCATTTTAG	NA	False	NA	NA	False	NA	NA	NA	22343880	22344054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_22343900_22344100
Isoform_114893_8	chr2	-	179	1	Intergenic	novelGene_6693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATGAATGAA	NA	False	NA	NA	False	NA	NA	NA	156118175	156117996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_156118000_156118200
Isoform_11490_7	chr11	-	3132	9	FSM	ENSMUSG00000041961.15	ENSMUST00000109867.8	6311	9	16	3163	16	-885	multi-exon	FALSE	canonical	3	15	junction_1	9.67923034130297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCTCTTGAGTCCTTT	6448	False	NA	NA	False	NA	NA	NA	5394831	5229486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5229762_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
Isoform_114903_44	chr2	-	683	1	NIC	ENSMUSG00000046229.11	novel	803	2	NA	NA	219	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTGTCTTGCGTT	NA	False	NA	-4	True	AATAAA	-23	NA	156154448	156153765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_156153800_156154400
Isoform_114907_24	chr2	-	177	1	Intergenic	novelGene_6694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAAAGGCTTAACTTAC	7684	False	NA	NA	False	NA	NA	NA	156172552	156172375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_156172400_156172600
Isoform_114908_4	chr2	-	1471	1	FSM	ENSMUSG00000082321.4	ENSMUST00000122112.2	639	1	-191	-641	-191	641	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCTATGATTCTGGCTG	6591	False	NA	NA	False	NA	NA	NA	156189951	156188480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156188500_156190000
Isoform_114909_4	chr2	+	156	1	Intergenic	novelGene_6695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGAGCATAGGTATA	9193	False	NA	NA	False	NA	NA	NA	156211664	156211820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156211700_156211800
Isoform_114920_91	chr2	-	4892	1	FSM	ENSMUSG00000102869.3	ENSMUST00000192863.3	4915	1	20	3	20	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGGGCGTCTCTAC	NA	False	NA	NA	False	AATAAA	-14	NA	156234879	156229987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_156230000_156234900
Isoform_114936_71	chr2	-	177	1	Intergenic	novelGene_6696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGAGTCTTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	156283085	156282908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_156282900_156283100
Isoform_114939_3	chr2	-	221	1	Intergenic	novelGene_6697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACACCTGACCTCACTGA	NA	False	NA	NA	False	AAAAAG	-29	NA	156518604	156518383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_156518400_156518600
Isoform_11494_5	chr11	-	4356	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	60	-663	intron_retention	FALSE	canonical	3	35	junction_3	4.75093975666168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGTTGTCTCCCTGGA	6492	False	NA	NA	False	ATTAAA	-19	NA	5394787	5229264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
Isoform_114944_5	chr2	+	176	1	Intergenic	novelGene_6698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATGAGTCTATG	NA	False	NA	NA	False	NA	NA	NA	156663411	156663587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156663400_156663600
Isoform_114946_3	chr2	-	3622	1	Genic_Genomic	ENSMUSG00000087179.9	novel	NA	NA	NA	NA	5472	2342	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156676248	156672626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_156672600_156676200
Isoform_11495_3	chr11	-	7361	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	-9	-5	intron_retention	FALSE	canonical	3	35	junction_3	4.75093975666168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACATGTGGTCATTG	6423	False	NA	-8	True	AATACA	-14	NA	5394856	5226328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
Isoform_114953_14	chr2	-	887	1	NIC	ENSMUSG00000085741.9	novel	904	2	NA	NA	4	-7957	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	156704879	156703992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_156704000_156704900
Isoform_114955_58	chr2	+	170	1	Intergenic	novelGene_6699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAGATAAA	6350	False	NA	NA	False	NA	NA	NA	156706755	156706925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156706800_156706900
Isoform_11496_5	chr11	-	4492	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	-78	-665	intron_retention	FALSE	canonical	3	35	junction_3	4.75093975666168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATACTGTTGTCTCCCTG	6354	False	NA	NA	False	ATTAAA	-17	NA	5394925	5229266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
Isoform_114960_13	chr2	+	176	1	Intergenic	novelGene_6700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACAAACTTT	NA	False	NA	NA	False	NA	NA	NA	156826638	156826814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156826600_156826800
Isoform_114963_10	chr2	-	2429	1	NIC	ENSMUSG00000027635.16	novel	2636	11	NA	NA	-2	671	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACTAAAAAAAAAAAGAAA	8132	False	NA	NA	False	NA	NA	NA	156848997	156846568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_156846600_156849000
Isoform_114965_22	chr2	-	159	1	Intergenic	novelGene_6014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	22814356	22814197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_22814200_22814400
Isoform_114966_7	chr2	+	176	1	Intergenic	novelGene_6701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTTGGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	156925571	156925747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156925600_156925700
Isoform_114967_34	chr4	-	192	1	Intergenic	novelGene_8271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTCTCTGAAA	NA	False	NA	NA	False	NA	NA	NA	152003206	152003014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_152003000_152003200
Isoform_114968_5	chr2	+	175	1	Intergenic	novelGene_6702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTTTTACAAG	NA	False	NA	NA	False	NA	NA	NA	156956752	156956927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156956800_156956900
Isoform_114971_71	chr2	-	178	1	Intergenic	novelGene_6015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	22816393	22816215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_22816200_22816400
Isoform_114972_3	chr2	+	2795	1	Intergenic	novelGene_6703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156973265	156976060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156973300_156976100
Isoform_114973_14	chr2	+	2079	1	Intergenic	novelGene_6704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156973981	156976060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_156974000_156976100
Isoform_114974_26	chr2	+	1054	1	Antisense	novelGene_ENSMUSG00000027641.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157019198	157020252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_157019200_157020300
Isoform_114975_11	chr2	+	179	1	Intergenic	novelGene_6705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATAGTACCAACAA	NA	False	NA	NA	False	NA	NA	NA	157051862	157052041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_157051900_157052000
Isoform_114979_11	chr2	-	182	1	Intergenic	novelGene_6706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTCTTCCTA	1252	False	NA	NA	False	NA	NA	NA	157203260	157203078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_157203100_157203300
Isoform_114981_108	chr2	+	180	1	Intergenic	novelGene_6707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	157243703	157243883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_157243700_157243900
Isoform_114991_3	chr2	+	7127	1	Intergenic	novelGene_6708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGCAGAAAAATGCAAAAG	1105	False	NA	NA	False	NA	NA	NA	157390403	157397530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_157390400_157397500
Isoform_114992_3	chr2	+	3237	1	Intergenic	novelGene_6709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAGAAAAATGCAAAAGAG	1559	False	NA	NA	False	NA	NA	NA	157394295	157397532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_157394300_157397500
Isoform_114996_4	chr2	+	196	1	Intergenic	novelGene_6710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGAGTGGCCGGGCGT	6817	False	NA	NA	False	NA	NA	NA	157409943	157410139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_157409900_157410100
Isoform_114997_54	chr2	-	167	1	Intergenic	novelGene_6711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATATTCAGAATTG	NA	False	NA	-8	True	NA	NA	NA	157433944	157433777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_157433800_157433900
Isoform_114998_36	chr2	-	180	1	Intergenic	novelGene_6712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	157479672	157479492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_157479500_157479700
Isoform_114999_81	chr2	+	182	1	Intergenic	novelGene_6713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGACAACTTTGT	NA	False	NA	NA	False	NA	NA	NA	157493534	157493716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_157493500_157493700
Isoform_115_13	ERCC-00099	+	1343	1	FSM	ERCC-00099A	DQ875387	1344	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00099_+_0_1300
Isoform_11500_756	chr11	-	3385	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-15	2	-15	-2	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTGTAATCCTGTAT	NA	False	NA	-4	True	AATAAA	-22	NA	5492202	5478888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
Isoform_115001_120	chrX	-	177	1	Intergenic	novelGene_12067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATTTT	NA	False	NA	NA	False	NA	NA	NA	93330069	93329892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93329900_93330100
Isoform_115002_321	chr19	+	181	1	Intergenic	novelGene_5581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	3882528	3882709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_3882500_3882700
Isoform_115003_5	chr2	+	1750	1	Intergenic	novelGene_6016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1620	False	NA	NA	False	NA	NA	NA	22876466	22878216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_22876500_22878200
Isoform_115005_5	chr2	-	190	1	Intergenic	novelGene_6717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTCAGTGTGACAAA	NA	False	NA	NA	False	NA	NA	NA	157770956	157770766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_157770800_157771000
Isoform_115006_5	chr2	+	175	1	Intergenic	novelGene_6718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAGAAATTTC	NA	False	NA	NA	False	NA	NA	NA	157853627	157853802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_157853600_157853800
Isoform_115007_9	chr2	-	2326	1	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	31	-17307	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	157870322	157867996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_157868000_157870300
Isoform_115014_3	chr2	-	164	1	Intergenic	novelGene_6719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGCGTCACACCCA	9380	False	NA	NA	False	NA	NA	NA	158109593	158109429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_158109400_158109600
Isoform_115015_9	chr2	+	205	1	Intergenic	novelGene_6720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTTATTTATTTAA	NA	False	NA	NA	False	NA	NA	NA	158135738	158135943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_158135700_158135900
Isoform_115016_3	chr2	+	175	1	Antisense	novelGene_ENSMUSG00000085385.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACTGCAAAA	NA	False	NA	NA	False	NA	NA	NA	158196367	158196542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_158196400_158196500
Isoform_115017_22	chr2	+	173	1	ISM	ENSMUSG00000044349.17	ENSMUST00000137320.2	3156	2	1420	1755	1373	101	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACAAAAAAAGAAAAGATGG	NA	False	NA	NA	False	NA	NA	NA	158219054	158219227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_+_158219100_158219200
Isoform_115018_3	chr2	+	806	1	FSM	ENSMUSG00000065840.3	ENSMUST00000083906.3	133	1	0	-673	0	673	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATGAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	158220141	158220947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_158220100_158220900
Isoform_115019_6	chr2	-	180	1	Antisense	novelGene_ENSMUSG00000044349.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAGAAAAAGCAAATGTA	5049	False	NA	NA	False	NA	NA	NA	158226122	158225942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_158225900_158226100
Isoform_115022_3	chr2	+	157	1	Intergenic	novelGene_6721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	158234261	158234418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_158234300_158234400
Isoform_115024_41	chr2	-	182	1	Antisense	novelGene_ENSMUSG00000037754.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3710	False	NA	NA	False	NA	NA	NA	158606951	158606769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_158606800_158607000
Isoform_115025_16	chr2	-	180	1	Intergenic	novelGene_5940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAACAGA	NA	False	NA	NA	False	NA	NA	NA	4698432	4698252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_4698300_4698400
Isoform_115027_20	chr2	-	166	1	Intergenic	novelGene_6722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAAAAAAATGTGATG	NA	False	NA	NA	False	NA	NA	NA	159348573	159348407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_159348400_159348600
Isoform_115028_12	chr2	-	176	1	Intergenic	novelGene_6723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTGC	NA	False	NA	NA	False	NA	NA	NA	159937255	159937079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_159937100_159937300
Isoform_11503_69	chr11	-	3438	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-68	2	-68	-2	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTGTAATCCTGTAT	NA	False	NA	-4	True	AATAAA	-22	NA	5492255	5478888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
Isoform_115031_12	chr2	+	169	1	Intergenic	novelGene_6724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	160457502	160457671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_160457500_160457700
Isoform_115034_13	chr2	+	173	1	Intergenic	novelGene_6017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTAGT	8613	False	NA	NA	False	NA	NA	NA	22923285	22923458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_22923300_22923500
Isoform_115036_54	chr2	-	177	1	Intergenic	novelGene_6725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	160516765	160516588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_160516600_160516800
Isoform_115037_8	chr2	-	180	1	Intergenic	novelGene_6726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	160541340	160541160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_160541200_160541300
Isoform_115041_3	chr2	+	1115	1	NIC	ENSMUSG00000027412.13	novel	3365	19	NA	NA	-5	-14457	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	160730085	160731200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_160730100_160731200
Isoform_115042_13	chr2	+	178	1	Intergenic	novelGene_6018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTG	2220	False	NA	NA	False	NA	NA	NA	22930779	22930957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_22930800_22931000
Isoform_115043_4	chr2	-	4228	1	NIC	ENSMUSG00000057133.15	novel	3092	17	NA	NA	2	-69815	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTATGTGT	NA	False	NA	NA	False	NA	NA	NA	160950993	160946765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_160946800_160951000
Isoform_115045_4	chr2	+	765	1	NIC	ENSMUSG00000084919.2	novel	630	3	NA	NA	0	-2368	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTAAAAAAATTATAATA	NA	False	NA	NA	False	TATAAA	-18	NA	162232732	162233497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_162232700_162233500
Isoform_115058_3	chr2	+	175	1	Intergenic	novelGene_6727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	162849984	162850159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_162850000_162850200
Isoform_115059_3	chr2	-	1387	1	Intergenic	novelGene_6728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162867238	162865851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_162865900_162867200
Isoform_115079_17	chr2	-	2574	1	FSM	ENSMUSG00000070708.6	ENSMUST00000094653.6	822	1	-1754	2	-1754	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTCCGGGCTGTGCTGGTT	915	False	NA	-5	True	AATAAA	-15	NA	162931529	162928955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_162929000_162931500
Isoform_115084_76	chr2	+	177	1	Intergenic	novelGene_5941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	4717199	4717376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_4717200_4717400
Isoform_115087_21	chr2	+	2612	1	Antisense	novelGene_ENSMUSG00000035399.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	163252452	163255064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_163252500_163255100
Isoform_115088_3	chr2	+	1443	1	FSM	ENSMUSG00000099632.2	ENSMUST00000190930.2	567	1	-878	2	-878	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTACCAGTCTCTGGCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	163260836	163262279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_163260800_163262300
Isoform_115089_6	chr2	-	209	1	Intergenic	novelGene_6729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAATAGAAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	163318628	163318419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_163318400_163318600
Isoform_11509_33	chr11	-	5852	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-15	-2465	-15	2465	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAACCGAGGCTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	5492202	5476421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
Isoform_115091_63	chr2	-	181	1	Intergenic	novelGene_6731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTGGCATTATATCT	NA	False	NA	-4	True	NA	NA	NA	163358957	163358776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_163358800_163359000
Isoform_115092_4	chr2	+	179	1	Intergenic	novelGene_6732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATTCCTAGATGTTTCA	NA	False	NA	NA	False	NA	NA	NA	163358987	163359166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_163359000_163359200
Isoform_115095_35	chr2	+	168	1	Intergenic	novelGene_6733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAAAAAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	163490297	163490465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_163490300_163490500
Isoform_115096_11	chr2	+	154	1	Intergenic	novelGene_6734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAGAGAGAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	163501790	163501944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_163501800_163501900
Isoform_115097_33	chr2	-	180	1	Intergenic	novelGene_6735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGAGTGCCTGCTA	8902	False	NA	NA	False	NA	NA	NA	163508716	163508536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_163508500_163508700
Isoform_115098_8	chr2	-	218	1	Intergenic	novelGene_6736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTCCTTAGGGCAG	NA	False	NA	NA	False	TATAAA	-6	NA	163520475	163520257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_163520300_163520500
Isoform_115118_20	chr2	-	175	1	Intergenic	novelGene_6737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	163883966	163883791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_163883800_163884000
Isoform_115120_11	chr2	+	1158	1	Antisense	novelGene_ENSMUSG00000018322.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATGTGCCTCACCCTC	NA	False	NA	NA	False	NA	NA	NA	163906973	163908131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_163907000_163908100
Isoform_115123_5	chr2	-	159	1	Intergenic	novelGene_6738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	163937536	163937377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_163937400_163937500
Isoform_115124_23	chr2	+	173	1	Intergenic	novelGene_6739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTGTCTGAAGACAGC	NA	False	NA	NA	False	NA	NA	NA	163964689	163964862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_163964700_163964900
Isoform_115134_3	chr2	+	2659	1	Antisense	novelGene_ENSMUSG00000017009.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCAGTAACAGACAACAGT	7567	False	NA	NA	False	NA	NA	NA	164263565	164266224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_164263600_164266200
Isoform_115135_3	chr2	+	3490	1	Antisense	novelGene_ENSMUSG00000017009.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7567	False	NA	NA	False	AAAACA	-17	NA	164263565	164267055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_164263600_164267100
Isoform_115136_7	chr2	+	879	1	Antisense	novelGene_ENSMUSG00000017009.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-17	NA	164266176	164267055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_164266200_164267100
Isoform_115137_3	chr2	-	2239	1	NIC	ENSMUSG00000017009.4	novel	2458	5	NA	NA	0	-15048	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACCAAAACAC	NA	False	NA	NA	False	NA	NA	NA	164285106	164282867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164282900_164285100
Isoform_115143_7	chr2	+	175	1	Intergenic	novelGene_6740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATGAGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	164556407	164556582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_164556400_164556600
Isoform_115144_34	chr2	+	176	1	Intergenic	novelGene_6741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164610738	164610914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_164610700_164610900
Isoform_115145_3	chr2	-	429	1	NIC	ENSMUSG00000086453.8	novel	676	6	NA	NA	17	-14957	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAACCAAAAAAAA	2109	False	NA	NA	False	NA	NA	NA	164611569	164611140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_164611100_164611600
Isoform_115150_96	chr2	+	215	1	Intergenic	novelGene_6742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATGTGAAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	164639280	164639495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_164639300_164639500
Isoform_115151_5	chr3	-	168	1	Intergenic	novelGene_7005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTAAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	55740522	55740354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_55740400_55740500
Isoform_115155_10	chr2	-	185	1	Intergenic	novelGene_6019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGATGACTAATTA	919	False	NA	NA	False	NA	NA	NA	23154975	23154790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_23154800_23155000
Isoform_115156_7	chr2	-	171	1	Intergenic	novelGene_6743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	145	False	NA	NA	False	NA	NA	NA	164657047	164656876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_164656900_164657000
Isoform_115168_4	chr2	-	287	1	Intergenic	novelGene_6745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164717885	164717598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_164717600_164717900
Isoform_115169_184	chr2	+	173	1	Intergenic	novelGene_6746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4378	False	NA	NA	False	NA	NA	NA	164719705	164719878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_164719700_164719900
Isoform_115170_37	chr2	-	1693	1	Antisense	novelGene_ENSMUSG00000039849.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164721705	164720012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_164720000_164721700
Isoform_115171_9	chr2	+	2063	1	NIC	ENSMUSG00000039849.7	novel	611	2	NA	NA	14	-1677	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAGAA	5963	False	NA	NA	False	NA	NA	NA	164721290	164723353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_164721300_164723400
Isoform_115173_7	chr2	+	1365	1	NIC	ENSMUSG00000085436.2	novel	1127	2	NA	NA	30	-6811	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAGAAAAGAGAAGAGAA	7270	False	NA	NA	False	NA	NA	NA	164753303	164754668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_164753300_164754700
Isoform_115174_5	chr2	-	166	1	Intergenic	novelGene_6747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCTTCCCCAATTC	NA	False	NA	NA	False	NA	NA	NA	164759181	164759015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_164759000_164759200
Isoform_115176_15	chr2	+	173	1	Intergenic	novelGene_6748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTTTGCCA	51	False	NA	NA	False	NA	NA	NA	164857837	164858010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_164857800_164858000
Isoform_115177_17	chr2	-	182	1	Intergenic	novelGene_6749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAGAAAACACTT	NA	False	NA	NA	False	NA	NA	NA	164946837	164946655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_164946700_164946800
Isoform_115179_43	chr2	-	158	1	Intergenic	novelGene_6750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	3571	False	NA	NA	False	NA	NA	NA	165231148	165230990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_165231000_165231100
Isoform_11518_77	chr11	-	867	3	FSM	ENSMUSG00000020477.11	ENSMUST00000020770.11	700	3	-12	-155	8	155	multi-exon	FALSE	canonical	3	2385	junction_2	231.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTCTTGGTCTC	NA	False	NA	0	True	NA	NA	NA	5657679	5654170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5654733_5657297_5657410_5657486
Isoform_115180_8	chr2	-	3226	1	Genic_Genomic	ENSMUSG00000039725.7	novel	NA	NA	NA	NA	-22	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAACAGTTTTCGGA	NA	False	NA	-28	True	NA	NA	NA	165335266	165332040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_165332000_165335300
Isoform_115181_24	chr2	+	175	1	Intergenic	novelGene_6751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGAGTATGGAGA	NA	False	NA	NA	False	NA	NA	NA	165546168	165546343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_165546200_165546300
Isoform_115183_13	chr2	+	174	1	Intergenic	novelGene_6752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165642410	165642584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_165642400_165642600
Isoform_115185_8	chr2	+	1179	1	Intergenic	novelGene_6753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165652161	165653340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_165652200_165653300
Isoform_115187_151	chr2	+	175	1	Intergenic	novelGene_6754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGGCTGACCT	2853	False	NA	NA	False	NA	NA	NA	165732943	165733118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_165732900_165733100
Isoform_115189_117	chr2	+	168	1	Intergenic	novelGene_6755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	5382	False	NA	NA	False	NA	NA	NA	165735472	165735640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_165735500_165735600
Isoform_11519_210	chr11	-	722	3	FSM	ENSMUSG00000020477.11	ENSMUST00000020770.11	700	3	-20	-2	0	2	multi-exon	FALSE	canonical	3	2385	junction_2	231.5	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTCTCTCTCTCTT	NA	False	NA	-23	True	AATAAA	-20	NA	5657687	5654323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5654733_5657297_5657410_5657486
Isoform_115191_16	chr2	+	151	1	Intergenic	novelGene_6756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACACGTAATAAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	165751163	165751314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_165751200_165751300
Isoform_115193_3164	chr14	+	169	1	Intergenic	novelGene_3411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	3211	False	NA	NA	False	NA	NA	NA	25591723	25591892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_25591700_25591900
Isoform_115194_13	chr2	+	176	1	Intergenic	novelGene_6758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATTAGAG	NA	False	NA	NA	False	NA	NA	NA	165762766	165762942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_165762800_165762900
Isoform_115196_186	chr2	-	175	1	Intergenic	novelGene_6759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165768104	165767929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_165767900_165768100
Isoform_115197_31	chr2	+	172	1	Intergenic	novelGene_6760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGGAGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	165790968	165791140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_165791000_165791100
Isoform_115198_3	chr2	+	158	1	Intergenic	novelGene_6761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTAGTTTACTCT	NA	False	NA	NA	False	NA	NA	NA	165793187	165793345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_165793200_165793300
Isoform_1152_545	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	18415	junction_1	2118.18355095954	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
Isoform_115201_3	chr2	-	1632	1	Intergenic	novelGene_6762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATATTCTTTTTAAAGGG	894	False	NA	NA	False	NA	NA	NA	165840924	165839292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_165839300_165840900
Isoform_115202_8	chr2	-	177	1	Intergenic	novelGene_6763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAAGTGCTTT	6961	False	NA	NA	False	NA	NA	NA	165854646	165854469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_165854500_165854600
Isoform_11521_516	chr11	-	809	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	-2	188	1	155	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTCTTGGTCTC	NA	False	NA	0	True	NA	NA	NA	5657689	5654170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
Isoform_115214_316	chr2	-	177	1	Intergenic	novelGene_6766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATTGT	NA	False	NA	NA	False	NA	NA	NA	165957535	165957358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_165957400_165957500
Isoform_115215_8	chr2	-	2152	1	Intergenic	novelGene_6767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTTGGTCATAGTGTC	NA	False	NA	-2	True	NA	NA	NA	166096632	166094480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166094500_166096600
Isoform_115216_27	chr2	-	160	1	Intergenic	novelGene_6769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	166199199	166199039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166199000_166199200
Isoform_115217_5	chr2	-	967	1	Intergenic	novelGene_6771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGCTTATGTGTGGGT	NA	False	NA	-6	True	GATAAA	-24	NA	166335115	166334148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166334100_166335100
Isoform_115218_3	chr2	+	163	1	Intergenic	novelGene_6772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAGCAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	166430364	166430527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_166430400_166430500
Isoform_115219_19	chr2	-	210	1	Intergenic	novelGene_6773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGGTGACGAGGGAGA	NA	False	NA	-6	True	NA	NA	NA	166591198	166590988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166591000_166591200
Isoform_11522_1724	chr11	-	652	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	2	341	2	2	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTCTCTCTCTCTT	NA	False	NA	-23	True	AATAAA	-20	NA	5657685	5654323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
Isoform_115221_6	chr2	+	2387	1	NIC	ENSMUSG00000042854.10	novel	4426	2	NA	NA	10	248	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTCTTATATTTATTTT	NA	False	NA	13	True	AAAACA	-23	NA	166635696	166638083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_166635700_166638100
Isoform_115222_5	chr2	+	2909	1	NIC	ENSMUSG00000042854.10	novel	4426	2	NA	NA	10	770	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACATCTTTTAATATTT	NA	False	NA	NA	False	NA	NA	NA	166635696	166638605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_166635700_166638600
Isoform_115225_3	chr2	+	4002	1	Genic_Genomic	ENSMUSG00000074582.11	novel	NA	NA	NA	NA	-53	-39435	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	166647454	166651456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_166647500_166651500
Isoform_115226_13	chr2	+	156	1	Intergenic	novelGene_6774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	166689315	166689471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_166689300_166689500
Isoform_11523_77	chr11	-	729	3	FSM	ENSMUSG00000020477.11	ENSMUST00000132874.2	503	3	5	-231	2	2	multi-exon	FALSE	canonical	3	1753	junction_2	547.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTCTCTCTCTCTT	NA	False	NA	-23	True	AATAAA	-20	NA	5657685	5654323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5654733_5657297_5657556_5657623
Isoform_115235_7	chr2	-	201	1	Intergenic	novelGene_6775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCAGATCATATGAAGAC	NA	False	NA	NA	False	NA	NA	NA	166762239	166762038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166762000_166762200
Isoform_115236_5	chr2	-	802	1	Intergenic	novelGene_6776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAACAACAAAAAGAACC	NA	False	NA	NA	False	NA	NA	NA	166767268	166766466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166766500_166767300
Isoform_115238_15	chr7	-	167	1	Intergenic	novelGene_10168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81665944	81665777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_81665800_81665900
Isoform_115239_7	chr2	+	169	1	Intergenic	novelGene_6777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACAATTATGATT	5754	False	NA	NA	False	NA	NA	NA	166811402	166811571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_166811400_166811600
Isoform_115242_100	chr15	+	177	1	Intergenic	novelGene_4046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	80878770	80878947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_80878800_80878900
Isoform_115247_20	chr4	+	176	1	Intergenic	novelGene_7595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	55491909	55492085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_55491900_55492100
Isoform_115249_93	chr2	-	179	1	Intergenic	novelGene_6780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166850310	166850131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166850100_166850300
Isoform_115253_22	chr2	-	177	1	Intergenic	novelGene_6781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	166863259	166863082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166863100_166863300
Isoform_115255_11	chr2	-	194	1	Intergenic	novelGene_6782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAGCCAGGCACGGTG	NA	False	NA	NA	False	NA	NA	NA	166872381	166872187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166872200_166872400
Isoform_115259_16	chr2	-	177	1	Intergenic	novelGene_6783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTTAGAGAT	NA	False	NA	NA	False	NA	NA	NA	166911491	166911314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166911300_166911500
Isoform_115260_185	chr2	+	178	1	Intergenic	novelGene_6784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167037767	167037945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_167037800_167037900
Isoform_115261_5	chr2	-	177	1	Intergenic	novelGene_6785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAACAACAACTCAAG	10001	False	NA	NA	False	NA	NA	NA	167050869	167050692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_167050700_167050900
Isoform_115262_8	chr2	+	176	1	Intergenic	novelGene_6786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	167101289	167101465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_167101300_167101500
Isoform_115263_9	chr2	+	177	1	Intergenic	novelGene_6787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTCCCACA	NA	False	NA	NA	False	NA	NA	NA	167109196	167109373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_167109200_167109400
Isoform_115264_20	chr2	-	179	1	Intergenic	novelGene_6788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGCATTCCT	NA	False	NA	NA	False	NA	NA	NA	167119857	167119678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_167119700_167119900
Isoform_115277_7	chr2	-	939	1	NIC	ENSMUSG00000017929.14	novel	4210	9	NA	NA	10	-40625	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATAAATATTCGCTGT	NA	False	NA	NA	False	NA	NA	NA	167191093	167190154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_167190200_167191100
Isoform_115279_37	chr2	+	192	1	Intergenic	novelGene_6789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCAAGTACTCTTACC	NA	False	NA	NA	False	NA	NA	NA	167207283	167207475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_167207300_167207500
Isoform_11528_120	chr11	-	3497	7	NNC	ENSMUSG00000049680.18	novel	5089	6	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.8466624027285	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTTGAATGTATACTCA	8841	False	NA	-3	True	NA	NA	NA	5691156	5664983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_5665618_5665648_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
Isoform_115280_4	chr2	+	155	1	Intergenic	novelGene_6790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAATCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	167221876	167222031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_167221900_167222000
Isoform_115283_6	chr2	-	217	1	Intergenic	novelGene_6791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCCAAAGCAGCACCTCA	7624	False	NA	NA	False	NA	NA	NA	167294592	167294375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_167294400_167294600
Isoform_115289_5	chr2	+	1266	1	NIC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	275	-21979	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167334839	167336105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_167334800_167336100
Isoform_11529_25	chr11	-	3695	6	FSM	ENSMUSG00000049680.18	ENSMUST00000093362.12	5089	6	-173	1567	-173	3	multi-exon	FALSE	canonical	3	47	junction_5	4.96386945839634	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTTGAATGTATACTCA	8674	False	NA	-3	True	NA	NA	NA	5691323	5664983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
Isoform_115296_3	chr2	-	172	1	Intergenic	novelGene_6792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATGAAAATACCAG	NA	False	NA	NA	False	NA	NA	NA	167399601	167399429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_167399400_167399600
Isoform_115299_3	chr2	-	230	1	Intergenic	novelGene_6793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTCAGACTCAAAATATGT	NA	False	NA	NA	False	NA	NA	NA	167508013	167507783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_167507800_167508000
Isoform_115300_3	chr2	-	7936	1	NIC	ENSMUSG00000090213.2	novel	1837	6	NA	NA	39	-27663	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAGGTCCACATTGGCT	NA	False	NA	NA	False	NA	NA	NA	167531703	167523767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_167523800_167531700
Isoform_115304_30	chr2	+	1679	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	-182	7	-182	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTTTGGGGGCAGT	NA	False	NA	25	True	AATAAA	-19	NA	167530652	167532331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167530700_167532300
Isoform_115305_227	chr2	+	1444	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	53	7	53	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTTTGGGGGCAGT	NA	False	NA	25	True	AATAAA	-19	NA	167530887	167532331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167530900_167532300
Isoform_115307_7	chr2	+	1503	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	53	-52	53	52	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGATTTATGCGAGAT	NA	False	NA	84	True	NA	NA	NA	167530887	167532390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167530900_167532400
Isoform_11531_7	chr11	-	3656	7	NNC	ENSMUSG00000049680.18	novel	4208	7	NA	NA	273	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.8822118237389	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTGAATGTATACTCAA	NA	False	NA	-2	True	NA	NA	NA	5712098	5664982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_5665618_5665648_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5711880
Isoform_115311_7	chr2	+	1226	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	330	-52	330	52	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGATTTATGCGAGAT	NA	False	NA	84	True	NA	NA	NA	167531164	167532390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_167531200_167532400
Isoform_115319_19	chr2	-	179	1	Intergenic	novelGene_6794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATATTGTGACTTGTG	NA	False	NA	-1	True	NA	NA	NA	167879861	167879682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_167879700_167879900
Isoform_115321_6	chr2	+	172	1	Intergenic	novelGene_6020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	24805024	24805196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_24805000_24805200
Isoform_115325_9	chr2	+	195	1	Intergenic	novelGene_6021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACAGCTCTTAGCA	NA	False	NA	NA	False	NA	NA	NA	24805393	24805588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_24805400_24805600
Isoform_115326_12	chr2	+	195	1	Intergenic	novelGene_6795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	167981858	167982053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_167981900_167982100
Isoform_115328_9	chr2	-	192	1	Intergenic	novelGene_6796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTCAATTCCCAA	7533	False	NA	NA	False	NA	NA	NA	168003174	168002982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_168003000_168003200
Isoform_11533_4	chr11	-	3298	3	Fusion	ENSMUSG00000020477.11_ENSMUSG00000049680.18	novel	394	5	NA	NA	3	5	multi-exon	FALSE	non_canonical	0	0	junction_1	1.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTGAATGTATACTCAAA	8854	False	NA	-1	True	NA	NA	NA	5691143	5664981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr11_-_5665618_5665648_5668264_5691096
Isoform_11534_21	chr11	-	828	3	FSM	ENSMUSG00000020475.4	ENSMUST00000020768.4	840	3	14	-2	14	2	multi-exon	FALSE	canonical	3	39	junction_1	6	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGTTTCATATAGCTGA	8662	False	NA	NA	False	AATAAA	-17	NA	5753719	5751637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5751840_5752998_5753180_5753274
Isoform_115345_25	chr2	-	176	1	Intergenic	novelGene_5934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATATAGCCATTTAA	NA	False	NA	NA	False	NA	NA	NA	3274208	3274032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_3274000_3274200
Isoform_115348_4	chr2	+	7094	1	Antisense	novelGene_ENSMUSG00000078919.11_AS_novelGene_ENSMUSG00000093752.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168050500	168057594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_168050500_168057600
Isoform_11535_4	chr11	-	2682	11	NIC	ENSMUSG00000020474.12	novel	2924	11	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	12.1227059685534	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATAGTTTTACAAGTTT	622	False	NA	NA	False	AATAAA	-17	NA	5787774	5777861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785516_5785628_5785800_5786193_5786375_5787560
Isoform_115350_14	chr2	-	745	1	NIC	ENSMUSG00000093752.2	novel	5288	12	NA	NA	2	-48632	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGTCTCCG	NA	False	NA	NA	False	NA	NA	NA	168072282	168071537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_168071500_168072300
Isoform_115351_4	chr2	+	2199	1	FSM	ENSMUSG00000074576.5	ENSMUST00000099071.5	1973	1	-230	4	-230	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATATTGAGTCTTAATTC	NA	False	NA	NA	False	TTTAAA	-1	NA	168072311	168074510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_168072300_168074500
Isoform_115356_144	chr2	+	1966	1	FSM	ENSMUSG00000074576.5	ENSMUST00000099071.5	1973	1	1	6	1	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATATTGAGTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	168072542	168074508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_168072500_168074500
Isoform_115358_3	chr2	+	175	1	Intergenic	novelGene_6797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCAACAGGGAT	3910	False	NA	NA	False	NA	NA	NA	168129623	168129798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168129600_168129800
Isoform_11536_55	chr11	-	2776	11	FSM	ENSMUSG00000020474.12	ENSMUST00000020767.4	2924	11	149	-1	-74	0	multi-exon	FALSE	canonical	3	32	junction_5	4.04969134626332	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTTTTACAAGTTTTA	529	False	NA	NA	False	AATAAA	-19	NA	5787867	5777859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
Isoform_115362_3	chr2	+	453	1	Intergenic	novelGene_6798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168153181	168153634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168153200_168153600
Isoform_115363_31	chr2	-	175	1	Intergenic	novelGene_6799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACACACACAAACCA	6203	False	NA	NA	False	NA	NA	NA	168224923	168224748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_168224700_168224900
Isoform_115365_19	chr2	-	159	1	Intergenic	novelGene_6800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	168284985	168284826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_168284800_168285000
Isoform_115366_20	chr2	+	180	1	Intergenic	novelGene_6801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTTTAAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	168474383	168474563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168474400_168474600
Isoform_115368_18	chr2	+	183	1	Intergenic	novelGene_6802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAAGGTTTA	2463	False	NA	NA	False	NA	NA	NA	168551516	168551699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168551500_168551700
Isoform_115370_28	chr2	+	178	1	Intergenic	novelGene_6022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAAAAGAGTGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	24829222	24829400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_24829200_24829400
Isoform_115379_3	chr2	+	1631	1	Antisense	novelGene_ENSMUSG00000027547.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAGAATAAAGCAGATTC	NA	False	NA	NA	False	AATAAA	-41	NA	168590259	168591890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_168590300_168591900
Isoform_115387_15	chr2	-	180	1	Intergenic	novelGene_6803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168631509	168631329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_168631300_168631500
Isoform_115388_3	chr2	-	158	1	Intergenic	novelGene_6023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGTAAATAAATA	1230	False	NA	NA	False	NA	NA	NA	24833351	24833193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_24833200_24833400
Isoform_11539_49	chr11	-	2903	11	FSM	ENSMUSG00000020474.12	ENSMUST00000020767.4	2924	11	22	-1	22	0	multi-exon	FALSE	canonical	3	32	junction_5	4.04969134626332	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTTTTACAAGTTTTA	402	False	NA	NA	False	AATAAA	-19	NA	5787994	5777859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
Isoform_115390_25	chr2	+	229	1	Intergenic	novelGene_6804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	168633586	168633815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168633600_168633800
Isoform_115391_34	chr2	-	168	1	Intergenic	novelGene_6805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAGGGAAGGCAGGG	NA	False	NA	NA	False	NA	NA	NA	168652727	168652559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_168652600_168652700
Isoform_115393_14	chr2	+	174	1	Intergenic	novelGene_6806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATTAAAAAAAAAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	168664723	168664897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168664700_168664900
Isoform_115394_18	chr2	+	178	1	Intergenic	novelGene_6807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	5484	False	NA	NA	False	NA	NA	NA	168676001	168676179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168676000_168676200
Isoform_115395_34	chr2	+	251	1	Intergenic	novelGene_6808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGGGTCAGTTCCTA	6049	False	NA	NA	False	NA	NA	NA	168676566	168676817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168676600_168676800
Isoform_115398_3	chr2	-	182	1	Intergenic	novelGene_6024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCTGAGCAAGCAAGAAC	678	False	NA	NA	False	NA	NA	NA	24833903	24833721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_24833700_24833900
Isoform_115400_13	chr2	-	345	1	Intergenic	novelGene_6809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAAAAATCTAAGA	2338	False	NA	NA	False	NA	NA	NA	168720210	168719865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_168719900_168720200
Isoform_115406_129	chr2	+	179	1	Antisense	novelGene_ENSMUSG00000027551.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	168792881	168793060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_168792900_168793100
Isoform_115407_5	chr2	-	173	1	Intergenic	novelGene_6025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24841831	24841658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_24841700_24841800
Isoform_115408_52	chr2	+	2355	1	Intergenic	novelGene_6816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCAGC	NA	False	NA	NA	False	AAAAAG	-30	NA	168847934	168850289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_168847900_168850300
Isoform_115410_5	chr2	-	168	1	Intergenic	novelGene_6818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTTTTTTAAACATA	NA	False	NA	NA	False	NA	NA	NA	169118440	169118272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_169118300_169118400
Isoform_115413_10	chr2	+	171	1	Intergenic	novelGene_6819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTCAATACTGGG	8709	False	NA	NA	False	NA	NA	NA	169923832	169924003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_169923800_169924000
Isoform_115414_9	chr2	+	176	1	Intergenic	novelGene_6820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAATTTCAATACT	8901	False	NA	NA	False	NA	NA	NA	169924024	169924200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_169924000_169924200
Isoform_115418_8	chr2	+	1404	1	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	0	-2704	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24852433	24853837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_24852400_24853800
Isoform_115422_6	chr2	+	174	1	Intergenic	novelGene_6822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGCGAGTGGGGTC	NA	False	NA	NA	False	NA	NA	NA	170029933	170030107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_170029900_170030100
Isoform_115423_3	chr2	+	300	1	Intergenic	novelGene_6823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACACACAGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	170029933	170030233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_170029900_170030200
Isoform_115424_3	chr2	+	177	1	Intergenic	novelGene_6824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	170033516	170033693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_170033500_170033700
Isoform_115425_91	chr14	-	176	1	Intergenic	novelGene_3543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55359353	55359177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_55359200_55359400
Isoform_115426_17	chr2	+	178	1	Intergenic	novelGene_6826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	170044847	170045025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_170044800_170045000
Isoform_115428_12	chr2	+	158	1	Intergenic	novelGene_6827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	170066790	170066948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_170066800_170066900
Isoform_115429_3	chr2	+	160	1	Intergenic	novelGene_6828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTTTGGGCTGGAGTG	NA	False	NA	NA	False	NA	NA	NA	170067828	170067988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_170067800_170068000
Isoform_115430_12	chr2	-	174	1	Intergenic	novelGene_6829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAATATTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	170076906	170076732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_170076700_170076900
Isoform_115434_4	chr2	+	368	1	FSM	ENSMUSG00000084013.2	ENSMUST00000118388.2	846	1	667	-189	667	189	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCTGGGTGGTTGTTG	NA	False	NA	NA	False	AATAAA	-36	NA	170127621	170127989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_170127600_170128000
Isoform_115435_24	chr2	-	177	1	Intergenic	novelGene_6830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	7821	False	NA	NA	False	NA	NA	NA	170143872	170143695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_170143700_170143900
Isoform_115437_6	chr2	-	941	1	NIC	ENSMUSG00000036850.5	novel	776	2	NA	NA	39	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATGTGTTTTGAATCAA	NA	False	NA	-5	True	ATTAAA	-19	NA	24865071	24864130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_24864100_24865100
Isoform_115439_3	chr2	-	182	1	Intergenic	novelGene_6832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAACAAACAAACCT	NA	False	NA	NA	False	NA	NA	NA	170792262	170792080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_170792100_170792300
Isoform_115440_11	chr2	+	171	1	Intergenic	novelGene_6833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAACCAACA	NA	False	NA	NA	False	NA	NA	NA	170836283	170836454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_170836300_170836500
Isoform_115441_3	chr2	-	165	1	Intergenic	novelGene_6834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCTTTCAAATGTAGT	NA	False	NA	NA	False	NA	NA	NA	171671779	171671614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_171671600_171671800
Isoform_115443_6	chr2	+	4085	2	NNC	ENSMUSG00000027495.5	novel	3617	3	NA	NA	17	-6059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGGTCAGAAGCATTC	NA	False	NA	NA	False	NA	NA	NA	172187501	172191610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_172189630_172189653
Isoform_115444_4	chr2	-	154	1	Intergenic	novelGene_6835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAGAAAGAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	172213723	172213569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_172213600_172213700
Isoform_115449_5	chr2	-	185	1	Intergenic	novelGene_6836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTTAAAAAAATAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	172263309	172263124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_172263100_172263300
Isoform_115450_2902	chr2	+	550	1	FSM	ENSMUSG00000084383.2	ENSMUST00000121309.2	483	1	-34	-33	-34	33	mono-exon	FALSE	NA	NA	NA	NA	NA	2902	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-16	NA	24875961	24876511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_24876000_24876500
Isoform_115459_4111	chr2	-	291	1	FSM	ENSMUSG00000081344.6	ENSMUST00000121320.2	171	1	-31	-89	-31	89	mono-exon	FALSE	NA	NA	NA	NA	NA	4111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	172351642	172351351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_172351400_172351600
Isoform_115466_39	chr2	+	552	1	NIC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	136	-3238	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172391648	172392200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_172391600_172392200
Isoform_115471_15	chr2	-	172	1	Intergenic	novelGene_6838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172479765	172479593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_172479600_172479800
Isoform_115473_82	chr5	+	176	1	Intergenic	novelGene_8591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86286452	86286628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_86286500_86286600
Isoform_115475_51	chr2	-	175	1	Intergenic	novelGene_6026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGACAGAATATTT	9352	False	NA	NA	False	NA	NA	NA	24925829	24925654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_24925700_24925800
Isoform_115477_5	chr2	+	461	1	Intergenic	novelGene_6839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGGATTGCATGCTGCC	4127	False	NA	NA	False	NA	NA	NA	173086932	173087393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_173086900_173087400
Isoform_115479_5	chr2	-	3631	1	Genic_Genomic	ENSMUSG00000038400.16	novel	NA	NA	NA	NA	-115	-44807	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	967	False	NA	NA	False	NA	NA	NA	173118441	173114810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_173114800_173118400
Isoform_115481_3	chr2	+	220	1	Intergenic	novelGene_6840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	173129583	173129803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_173129600_173129800
Isoform_115484_8	chr2	+	835	1	NIC	ENSMUSG00000027519.11	novel	7045	6	NA	NA	-7	-40471	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATTCCAATAA	NA	False	NA	NA	False	NA	NA	NA	173501641	173502476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_173501600_173502500
Isoform_115485_3	chr2	-	154	1	Intergenic	novelGene_6842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACACTG	NA	False	NA	NA	False	NA	NA	NA	173509154	173509000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_173509000_173509200
Isoform_115486_3	chr2	+	223	1	Intergenic	novelGene_6843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCCTTTCTTTTTTT	7112	False	NA	NA	False	AAAACA	-18	NA	173786331	173786554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_173786300_173786600
Isoform_115488_14	chr2	+	962	1	NIC	ENSMUSG00000027522.16	novel	356	4	NA	NA	0	-13455	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	173918110	173919072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_173918100_173919100
Isoform_115492_9	chr2	-	623	1	FSM	ENSMUSG00000065521.3	ENSMUST00000083587.3	79	1	69	-613	69	613	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGATTGTTTGGTGTTGT	NA	False	NA	NA	False	AATAAA	-9	NA	174108849	174108226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_174108200_174108800
Isoform_115493_15	chr2	+	7642	2	NNC	ENSMUSG00000027523.21	novel	2059	4	NA	NA	1135	-2741	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	7431	False	NA	NA	False	NA	NA	NA	174128285	174135947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_+_174135752_174135771
Isoform_115494_7	chr2	-	466	1	NIC	ENSMUSG00000086537.8	novel	2248	5	NA	NA	0	-10618	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAAAAAAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	174137229	174136763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_174136800_174137200
Isoform_115496_26	chr2	+	2573	1	FSM	ENSMUSG00000078202.4	ENSMUST00000104999.4	2582	1	1	8	1	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATACTGGTTTTAA	7952	False	NA	NA	False	AATAAA	-25	NA	25070770	25073343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25070800_25073300
Isoform_115499_46	chr14	-	174	1	Intergenic	novelGene_3497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	NA	NA	NA	47821143	47820969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_47821000_47821100
Isoform_11550_2099	chr11	-	1570	11	FSM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	66	10	-14	-2	multi-exon	FALSE	canonical	3	869	junction_10	541.870242770352	2099	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTCTGAACCTTGTTCAC	9571	False	NA	-8	True	AATAAA	-15	NA	5828226	5822189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
Isoform_115501_23	chr2	-	172	1	Intergenic	novelGene_6844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTTAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	174244801	174244629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_174244600_174244800
Isoform_115507_8	chr2	+	179	1	Intergenic	novelGene_6845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	174661525	174661704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_174661500_174661700
Isoform_115508_25	chr2	-	165	1	Intergenic	novelGene_6865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	176974190	176974025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_176974000_176974200
Isoform_115509_3	chr2	-	851	1	Antisense	novelGene_ENSMUSG00000026662.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4887424	4886573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_4886600_4887400
Isoform_115513_48	chr2	-	175	1	Intergenic	novelGene_6027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25082905	25082730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_25082700_25082900
Isoform_115514_3	chr2	-	3313	1	Genic_Genomic	ENSMUSG00000059555.7	novel	NA	NA	NA	NA	726	245	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	9115	False	NA	NA	False	NA	NA	NA	25086045	25082732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_25082700_25086000
Isoform_115516_7	chr2	-	3077	1	NIC	ENSMUSG00000059555.7	novel	3255	2	NA	NA	716	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCACCTTCTTTTCT	9105	False	NA	NA	False	AATAAA	-16	NA	25086055	25082978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25083000_25086100
Isoform_115518_3	chr2	+	175	1	Intergenic	novelGene_6848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	174864645	174864820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_174864600_174864800
Isoform_115519_51	chr2	-	165	1	Intergenic	novelGene_6849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAATAAATCTTTATAAAA	NA	False	NA	NA	False	NA	NA	NA	174900489	174900324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_174900300_174900500
Isoform_115523_46	chr9	-	183	1	Intergenic	novelGene_11320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58170725	58170542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58170500_58170700
Isoform_115526_22	chr2	-	177	1	Intergenic	novelGene_6852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	174965490	174965313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_174965300_174965500
Isoform_115528_21	chr2	+	178	1	Intergenic	novelGene_6853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	174970566	174970744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_174970600_174970700
Isoform_115530_5	chr2	-	5086	1	Genic_Genomic	ENSMUSG00000090093.9	novel	NA	NA	NA	NA	-6	-4008	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCAGACATGGTAAGT	NA	False	NA	NA	False	NA	NA	NA	174983811	174978725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_174978700_174983800
Isoform_115533_4	chr2	-	179	1	Intergenic	novelGene_6854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	175030478	175030299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_175030300_175030500
Isoform_115539_3	chr2	+	3318	1	Intergenic	novelGene_6855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175129819	175133137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_175129800_175133100
Isoform_11554_24	chr11	-	456	4	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	766	2	766	-2	3prime_fragment	FALSE	canonical	3	77	junction_3	8.80656320908194	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGGTGTTGGCTTGAC	NA	False	NA	0	True	AATAAA	-18	NA	5848016	5846638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831
Isoform_115542_14	chr2	+	2526	1	NIC	ENSMUSG00000078887.11	novel	1445	4	NA	NA	-7	-1759	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	175661030	175663556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_175661000_175663600
Isoform_115543_4	chr2	+	174	1	Intergenic	novelGene_6856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	175451893	175452067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_175451900_175452100
Isoform_115559_26	chr2	-	177	1	Intergenic	novelGene_6869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCACATAATTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	177467339	177467162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_177467200_177467300
Isoform_11556_17	chr11	-	721	6	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	89	1	89	-1	3prime_fragment	FALSE	canonical	3	38	junction_4	23.9115035077261	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGTGTTGGCTTGACT	NA	False	NA	1	True	AATAAA	-19	NA	5848693	5846637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831_5847937_5848159_5848236_5848425
Isoform_115561_43	chr2	-	183	1	Intergenic	novelGene_6851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAAATTTTT	6748	False	NA	NA	False	NA	NA	NA	174920998	174920815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_174920800_174921000
Isoform_115564_3	chr2	-	175	1	Intergenic	novelGene_6857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	176308395	176308220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_176308200_176308400
Isoform_115568_22	chr2	-	178	1	Intergenic	novelGene_6871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	177581083	177580905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_177580900_177581100
Isoform_11557_3	chr11	-	1153	2	FSM	ENSMUSG00000041798.16	ENSMUST00000125434.2	394	2	-15	-744	-15	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATGGCCTGCTGATT	NA	False	NA	NA	False	ATTAAA	-14	NA	5852102	5850824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5851815_5851939
Isoform_115572_29	chr2	+	177	1	Intergenic	novelGene_6858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	176419846	176420023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_176419800_176420000
Isoform_115574_35	chr2	-	177	1	Intergenic	novelGene_6860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCACATAATTATAAACA	NA	False	NA	NA	False	NA	NA	NA	176762699	176762522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_176762500_176762700
Isoform_115575_98	chr2	-	204	1	Intergenic	novelGene_6861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAGAAGAGGAC	NA	False	NA	NA	False	NA	NA	NA	176764839	176764635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_176764600_176764800
Isoform_115577_7	chr2	+	172	1	Intergenic	novelGene_6862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGCATTAAAACATTT	NA	False	NA	NA	False	NA	NA	NA	176772622	176772794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_176772600_176772800
Isoform_115578_53	chr2	+	850	1	FSM	ENSMUSG00000078201.6	ENSMUST00000104998.5	854	1	2	2	2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATGCTCTGAATTGCC	NA	False	NA	4	True	ATTAAA	-14	NA	25145452	25146302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25145500_25146300
Isoform_115579_3	chr2	+	1070	1	FSM	ENSMUSG00000078201.6	ENSMUST00000104998.5	854	1	12	-228	12	228	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTAGCCTTTTGTTCAT	NA	False	NA	NA	False	GATAAA	-34	NA	25145462	25146532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25145500_25146500
Isoform_11558_17	chr11	-	4004	21	FSM	ENSMUSG00000057897.15	ENSMUST00000093355.12	1973	21	-33	-1998	-3	1	multi-exon	FALSE	canonical	3	14	junction_5	41.4625131896271	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	3007	False	NA	NA	False	NA	NA	NA	6015615	5919670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_115580_34	chr2	+	177	1	Intergenic	novelGene_6850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCACATAATTATAAACA	NA	False	NA	NA	False	NA	NA	NA	174913983	174914160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_174914000_174914200
Isoform_115584_365	chr2	-	176	1	Intergenic	novelGene_6028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25146912	25146736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_25146700_25146900
Isoform_115585_3	chr2	-	2885	1	Genic_Genomic	ENSMUSG00000083817.2	novel	NA	NA	NA	NA	2625	2019	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCCTGGTCTTGA	9703	False	NA	NA	False	NA	NA	NA	176918131	176915246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_176915200_176918100
Isoform_115586_41	chr2	+	159	1	Intergenic	novelGene_6863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATCAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	176939858	176940017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_176939900_176940000
Isoform_115588_130	chr2	-	177	1	Intergenic	novelGene_6864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGTGCACAGAA	NA	False	NA	NA	False	NA	NA	NA	176949007	176948830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_176948800_176949000
Isoform_115589_62	chr2	+	172	1	Intergenic	novelGene_6029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTAGGGTGTTATG	NA	False	NA	2	True	NA	NA	NA	25147477	25147649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_25147500_25147600
Isoform_115591_20	chr2	+	167	1	Intergenic	novelGene_6847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	174841959	174842126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_174842000_174842100
Isoform_115592_3	chr2	-	1797	1	Intergenic	novelGene_6866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATCAAATCATAAACT	NA	False	NA	NA	False	NA	NA	NA	177021619	177019822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_177019800_177021600
Isoform_115593_6	chr2	-	161	1	Intergenic	novelGene_6030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	25149399	25149238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_25149200_25149400
Isoform_115605_4	chr2	-	464	1	Intergenic	novelGene_6867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAGAAGAAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	177251317	177250853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_177250900_177251300
Isoform_115608_3	chr2	-	3358	1	Intergenic	novelGene_6868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATCTGTGTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	177259705	177256347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_177256300_177259700
Isoform_11561_8	chr11	-	4097	21	FSM	ENSMUSG00000057897.15	ENSMUST00000093355.12	1973	21	-98	-2026	-22	1	multi-exon	FALSE	canonical	3	14	junction_5	41.4625131896271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2942	False	NA	NA	False	NA	NA	NA	6015680	5919642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_115613_9	chr2	-	1366	1	NIC	ENSMUSG00000026966.7	novel	845	3	NA	NA	-1	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTCTGCTAGCTACC	NA	False	NA	-7	True	AATAAA	-15	NA	25162417	25161051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25161100_25162400
Isoform_11562_14	chr11	-	3918	20	NIC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	0	1	intron_retention	FALSE	canonical	3	32	junction_5	33.5580697347349	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	2964	False	NA	NA	False	NA	NA	NA	6015658	5919670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_11563_18	chr11	-	3875	20	NIC	ENSMUSG00000057897.15	novel	4004	20	NA	NA	-4	0	intron_retention	FALSE	canonical	3	32	junction_5	33.5580697347349	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	3006	False	NA	NA	False	NA	NA	NA	6015616	5919671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_115645_79	chr2	+	175	1	Intergenic	novelGene_6870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	177488866	177489041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_177488900_177489000
Isoform_115646_4	chr9	-	154	1	Intergenic	novelGene_11772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	123416029	123415875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_123415900_123416000
Isoform_115652_19	chr2	+	1662	1	FSM	ENSMUSG00000061897.6	ENSMUST00000118761.2	456	1	-187	-1019	-187	1019	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	ATTAAA	-15	NA	178819030	178820692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_178819000_178820700
Isoform_115655_26	chr2	-	206	1	Intergenic	novelGene_6872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTCTAGTTCTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179248036	179247830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_179247800_179248000
Isoform_115656_89	chr2	-	176	1	Antisense	novelGene_ENSMUSG00000085830.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATCTGAAAAAT	7694	False	NA	NA	False	NA	NA	NA	25189097	25188921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_25188900_25189100
Isoform_115658_38	chr2	+	161	1	Intergenic	novelGene_6873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAGGATTGTAA	NA	False	NA	NA	False	NA	NA	NA	179590887	179591048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_179590900_179591000
Isoform_115659_3	chr2	+	181	1	Intergenic	novelGene_6874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	179635809	179635990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_179635800_179636000
Isoform_11566_7	chr11	-	4016	20	NIC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	-8	1	intron_retention	FALSE	canonical	3	32	junction_5	33.5580697347349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	2866	False	NA	NA	False	NA	NA	NA	6015756	5919670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_115669_11	chr2	+	2364	1	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	16	-7636	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179712400	179714764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_179712400_179714800
Isoform_115671_245	chr2	-	184	1	Intergenic	novelGene_6875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAATGCTGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	179718954	179718770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_179718800_179719000
Isoform_115674_27	chr2	-	180	1	Intergenic	novelGene_6876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAGAAAA	63	False	NA	NA	False	NA	NA	NA	179806628	179806448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_179806400_179806600
Isoform_115677_10	chr2	+	182	1	Intergenic	novelGene_6877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAACAAAAAACGATT	NA	False	NA	NA	False	NA	NA	NA	179826622	179826804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_179826600_179826800
Isoform_115679_40	chr2	+	176	1	Intergenic	novelGene_6878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAGAGTGAATA	NA	False	NA	NA	False	NA	NA	NA	179885355	179885531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_179885400_179885500
Isoform_11568_4	chr11	-	3825	20	NIC	ENSMUSG00000057897.15	novel	1875	21	NA	NA	10	-2	intron_retention	FALSE	canonical	2	4	junction_5	42.1330829147391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	2974	False	NA	NA	False	NA	NA	NA	6015648	5919669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_115683_8	chr2	-	227	1	Intergenic	novelGene_6880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGGAAATCAAGGG	NA	False	NA	NA	False	NA	NA	NA	179939636	179939409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_179939400_179939600
Isoform_115690_3	chr2	+	693	1	Antisense	novelGene_ENSMUSG00000038914.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	180323735	180324428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_180323700_180324400
Isoform_115691_3	chr2	-	965	1	Antisense	novelGene_ENSMUSG00000036646.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAATAAACCT	5856	False	NA	NA	False	NA	NA	NA	25222583	25221618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_25221600_25222600
Isoform_115693_3	chr2	+	1721	1	NIC	ENSMUSG00000027573.12	novel	1655	5	NA	NA	51	-2851	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAGTCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	180351960	180353681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_180352000_180353700
Isoform_115695_12	chr2	-	157	1	Intergenic	novelGene_6881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	180355473	180355316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_180355300_180355500
Isoform_115697_9	chr2	+	2237	1	Intergenic	novelGene_6883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGTCTGAAAGCTCTT	NA	False	NA	21	True	AGTAAA	-22	NA	180361154	180363391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_180361200_180363400
Isoform_115698_47	chr2	-	3218	1	Intergenic	novelGene_6884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180364407	180361189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_180361200_180364400
Isoform_115701_7	chr2	+	169	1	Intergenic	novelGene_6885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAAAAAATTACTTATT	NA	False	NA	NA	False	NA	NA	NA	180380663	180380832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_180380700_180380800
Isoform_115703_67	chr2	-	166	1	Intergenic	novelGene_6886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAAAAAAAAAATCTAGC	1025	False	NA	NA	False	NA	NA	NA	180385770	180385604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_180385600_180385800
Isoform_115705_10	chr2	+	175	1	Intergenic	novelGene_6887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAAGGTTGGG	NA	False	NA	NA	False	NA	NA	NA	180523701	180523876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_180523700_180523900
Isoform_115706_137	chr2	+	177	1	Intergenic	novelGene_6888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAAGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	180543574	180543751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_180543600_180543800
Isoform_115708_254	chr2	-	171	1	Intergenic	novelGene_6889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	180549771	180549600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_180549600_180549800
Isoform_115709_3	chr2	+	6774	1	Antisense	novelGene_ENSMUSG00000038848.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTCCATCCCCAGCCCAC	NA	False	NA	NA	False	NA	NA	NA	180553886	180560660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_180553900_180560700
Isoform_11571_115	chr11	-	3743	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	130	-2001	0	1	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	3010	False	NA	NA	False	NA	NA	NA	6015612	5919670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_115710_58	chr2	-	175	1	Intergenic	novelGene_6890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATACCATGATC	1011	False	NA	NA	False	NA	NA	NA	180588360	180588185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_180588200_180588400
Isoform_115714_19	chr2	-	163	1	Intergenic	novelGene_6891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	180632114	180631951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_180632000_180632100
Isoform_115715_94	chr2	+	177	1	Intergenic	novelGene_6892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTAGCTCTCG	6381	False	NA	NA	False	NA	NA	NA	180832084	180832261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_180832100_180832300
Isoform_115716_48	chr2	-	228	1	Intergenic	novelGene_6893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATAAATGCTTAGGCCA	NA	False	NA	NA	False	NA	NA	NA	180833869	180833641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_180833600_180833900
Isoform_115718_4	chr2	-	4062	1	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-2	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTCTAGTAGGATC	9005	False	NA	-21	True	AATAAA	-13	NA	25246367	25242305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_25242300_25246400
Isoform_115722_20	chr2	+	232	1	Intergenic	novelGene_6894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAATAAGAATTTTGGA	NA	False	NA	NA	False	AAAAAG	-32	NA	180926403	180926635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_180926400_180926600
Isoform_115723_5	chr2	+	2607	1	Antisense	novelGene_ENSMUSG00000038705.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTACA	550	False	NA	NA	False	NA	NA	NA	180929573	180932180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_180929600_180932200
Isoform_115726_5	chr2	-	173	1	Intergenic	novelGene_6895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	2643	False	NA	NA	False	NA	NA	NA	180952049	180951876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_180951900_180952000
Isoform_115728_7	chr2	+	1576	1	Intergenic	novelGene_6032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGTGTTTGCCTGTGT	3194	False	NA	NA	False	ATTAAA	-18	NA	25246437	25248013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_25246400_25248000
Isoform_11573_60	chr11	-	3817	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	56	-2001	-28	1	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	2936	False	NA	NA	False	NA	NA	NA	6015686	5919670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_115732_4	chr2	-	4162	1	Genic_Genomic	ENSMUSG00000027583.14	novel	NA	NA	NA	NA	34451	1986	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAGCAAAAA	7573	False	NA	NA	False	NA	NA	NA	181031730	181027568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_-_181027600_181031700
Isoform_115734_38	chr2	-	175	1	Intergenic	novelGene_6896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGTCAAATG	NA	False	NA	NA	False	NA	NA	NA	181071956	181071781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_181071800_181072000
Isoform_115735_52	chr2	+	190	1	Intergenic	novelGene_6897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTCAAAGCTCTGGAGT	NA	False	NA	NA	False	NA	NA	NA	181137854	181138044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_181137900_181138000
Isoform_115738_1071	chr2	-	178	1	Intergenic	novelGene_6898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1071	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTGATGGC	NA	False	NA	-12	True	NA	NA	NA	181177258	181177080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_181177100_181177300
Isoform_115739_53	chr2	-	192	1	Intergenic	novelGene_6899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATAAGTGCACTCACT	NA	False	NA	NA	False	NA	NA	NA	181182157	181181965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_181182000_181182200
Isoform_115745_188	chr2	+	178	1	Intergenic	novelGene_6033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	296	False	NA	NA	False	NA	NA	NA	25255971	25256149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_25256000_25256100
Isoform_115749_10	chr2	-	176	1	Intergenic	novelGene_6900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACAGTG	6485	False	NA	NA	False	NA	NA	NA	181235549	181235373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_181235400_181235500
Isoform_115752_35	chr2	+	219	1	Intergenic	novelGene_6901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAATAATAAAACAT	7233	False	NA	NA	False	NA	NA	NA	181247850	181248069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_181247800_181248100
Isoform_115753_21	chr2	-	222	1	Intergenic	novelGene_6902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGACAGATGGTTCCAGAA	NA	False	NA	NA	False	NA	NA	NA	181252023	181251801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_181251800_181252000
Isoform_115754_30	chr2	+	280	1	Intergenic	novelGene_6034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATCCAAA	2111	False	NA	NA	False	NA	NA	NA	25257786	25258066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_25257800_25258100
Isoform_115756_77	chr2	-	195	1	Intergenic	novelGene_6903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAAGTTCCTCTAT	NA	False	NA	NA	False	TATAAA	-4	NA	181267526	181267331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_181267300_181267500
Isoform_115761_7	chr2	-	171	1	Intergenic	novelGene_6904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAGATTAATAGT	6491	False	NA	NA	False	NA	NA	NA	181307822	181307651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_181307700_181307800
Isoform_115762_105	chr2	+	205	1	Intergenic	novelGene_6905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTTGGGGGGGGG	1482	False	NA	NA	False	NA	NA	NA	181308236	181308441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_181308200_181308400
Isoform_115767_8	chr2	-	3317	1	Intergenic	novelGene_6906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAACTGCTATA	NA	False	NA	NA	False	NA	NA	NA	181506007	181502690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_181502700_181506000
Isoform_115768_186	chr5	+	181	1	Intergenic	novelGene_8449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAACGTGATACC	NA	False	NA	NA	False	NA	NA	NA	33512884	33513065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_33512900_33513100
Isoform_115769_56	chr3	-	177	1	Intergenic	novelGene_7043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73469246	73469069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_73469100_73469200
Isoform_11577_11	chr11	-	3925	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	-52	-2001	-46	1	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	2828	False	NA	NA	False	NA	NA	NA	6015794	5919670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_115770_65	chr2	-	177	1	Intergenic	novelGene_5942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	4899946	4899769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_4899800_4899900
Isoform_115772_11	chr2	+	175	1	Intergenic	novelGene_6036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	25445572	25445747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_25445600_25445700
Isoform_115774_4	chr2	-	157	1	Intergenic	novelGene_5943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	4903306	4903149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_4903100_4903300
Isoform_115777_20	chr2	+	862	1	FSM	ENSMUSG00000049086.9	ENSMUST00000061483.9	983	1	71	50	71	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGATTTTAGGATATGA	NA	False	NA	15	True	AATAAA	-17	NA	25596821	25597683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25596800_25597700
Isoform_115779_144	chr2	+	886	1	FSM	ENSMUSG00000049086.9	ENSMUST00000061483.9	983	1	94	3	94	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGATTCTTTTTTATT	NA	False	NA	24	True	TATAAA	-20	NA	25596844	25597730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_25596800_25597700
Isoform_115784_233	chr2	-	174	1	Intergenic	novelGene_5944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	4908523	4908349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_4908300_4908500
Isoform_115785_12	chr2	+	178	1	Intergenic	novelGene_6037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATAACAGGGG	NA	False	NA	NA	False	NA	NA	NA	25908932	25909110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_25908900_25909100
Isoform_115786_183	chr2	-	172	1	Intergenic	novelGene_6038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAACTTACA	NA	False	NA	NA	False	NA	NA	NA	25921049	25920877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_25920900_25921000
Isoform_115787_63	chr5	+	178	1	Intergenic	novelGene_9085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATTTTTCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142518997	142519175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142519000_142519200
Isoform_115788_51	chr2	+	180	1	Intergenic	novelGene_6040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCAGGGCTA	NA	False	NA	NA	False	NA	NA	NA	26017416	26017596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_26017400_26017600
Isoform_115790_14	chr2	-	3492	1	FSM	ENSMUSG00000087679.3	ENSMUST00000163836.2	420	1	-1503	-1569	216	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	False	NA	-6	True	ATTAAA	-19	NA	26030317	26026825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26026800_26030300
Isoform_115793_7	chr2	-	3701	1	FSM	ENSMUSG00000087679.3	ENSMUST00000163836.2	420	1	-1714	-1567	5	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGGAGTGATTGCTTA	NA	False	NA	-8	True	ATTAAA	-17	NA	26030528	26026827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_26026800_26030500
Isoform_115797_50	chr2	+	193	1	Intergenic	novelGene_6041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTACTTTGGTTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	26123517	26123710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_26123500_26123700
Isoform_115798_175	chr2	+	171	1	Intergenic	novelGene_6042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26176903	26177074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_26176900_26177100
Isoform_115799_4	chr2	-	1785	1	NIC	ENSMUSG00000075467.5	novel	2766	2	NA	NA	20	-2175	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCACCGGGCCTGGGCTCC	NA	False	NA	-24	True	AGTAAA	-15	NA	26242092	26240307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26240300_26242100
Isoform_1158_2427	SIRV6	+	782	3	FSM	SIRV6A	SIRV615	783	3	1	0	1	0	multi-exon	FALSE	canonical	3	18822	junction_2	2138	2427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10238	11330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_10819_11031_11109_11205
Isoform_11580_5	chr11	-	3705	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	196	-2029	-1	1	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	3076	False	NA	NA	False	NA	NA	NA	6015546	5919642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_115805_113	chr2	+	177	1	Intergenic	novelGene_6043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTCTC	NA	False	NA	NA	False	NA	NA	NA	26414005	26414182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_26414000_26414200
Isoform_115806_3	chr2	-	187	1	Intergenic	novelGene_6044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAACAA	5903	False	NA	NA	False	NA	NA	NA	26510832	26510645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_26510600_26510800
Isoform_115809_20	chr2	-	176	1	Intergenic	novelGene_6048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	26543679	26543503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_26543500_26543700
Isoform_115811_4	chr2	-	175	1	Intergenic	novelGene_6049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	26744148	26743973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_26744000_26744100
Isoform_115813_17	chr2	+	173	1	Intergenic	novelGene_6050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAATTCCTACAGAAA	NA	False	NA	NA	False	NA	NA	NA	26756721	26756894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_26756700_26756900
Isoform_115820_5	chr2	-	2965	1	NIC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	-6	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGCTCAGTCTGA	NA	False	NA	-9	True	AATAAA	-15	NA	26806363	26803398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_26803400_26806400
Isoform_115827_6	chr2	-	176	1	Intergenic	novelGene_6052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGTTGGTTC	5904	False	NA	NA	False	NA	NA	NA	26859050	26858874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_26858900_26859000
Isoform_115828_4	chr2	-	189	1	Intergenic	novelGene_6053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGAGTTATAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	26870125	26869936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_26869900_26870100
Isoform_115829_4	chr2	+	1917	1	Genic_Genomic	ENSMUSG00000015488.15	novel	NA	NA	NA	NA	3591	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTCTGCCTGTCACC	6107	False	NA	42	True	AGTAAA	-19	NA	26909185	26911102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr2_+_26909200_26911100
Isoform_115831_46	chr2	-	168	1	Intergenic	novelGene_6054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCATTGTTGTTGTTT	7641	False	NA	NA	False	NA	NA	NA	26925794	26925626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_26925600_26925800
Isoform_115833_33	chr2	+	171	1	Intergenic	novelGene_6055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATTAAAAAAAAGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	27327234	27327405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_27327200_27327400
Isoform_115835_35	chr2	+	1701	1	FSM	ENSMUSG00000109946.2	ENSMUST00000209765.2	1898	1	197	0	18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	False	NA	3	True	AATAAA	-15	NA	27332532	27334233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_27332500_27334200
Isoform_115842_4	chr2	+	181	1	Intergenic	novelGene_6056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	27355045	27355226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_27355000_27355200
Isoform_115844_218	chr2	+	179	1	Intergenic	novelGene_5945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGAACGCTC	NA	False	NA	NA	False	NA	NA	NA	4973145	4973324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_4973100_4973300
Isoform_115845_3	chr2	+	213	1	Intergenic	novelGene_6057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCAGAATGGTGAGCAG	NA	False	NA	NA	False	NA	NA	NA	27379740	27379953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_27379700_27380000
Isoform_115846_30	chr2	-	179	1	Intergenic	novelGene_6058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAAGAATAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	27408015	27407836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_27407800_27408000
Isoform_115847_58	chr2	-	182	1	Intergenic	novelGene_6059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	27412151	27411969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_27412000_27412200
Isoform_115865_3	chr2	-	187	1	Intergenic	novelGene_6060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATTTTTTTTCTCC	22	True	NA	NA	False	NA	NA	NA	27427004	27426817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_27426800_27427000
Isoform_115866_17	chr2	-	166	1	Intergenic	novelGene_6061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTACAATGTGAA	5649	False	NA	NA	False	NA	NA	NA	27442274	27442108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_27442100_27442300
Isoform_115868_5	chr2	+	176	1	Intergenic	novelGene_6062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	28329411	28329587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_28329400_28329600
Isoform_115869_16	chr2	-	220	1	Intergenic	novelGene_6063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTACTTGTAAGTCTC	NA	False	NA	NA	False	TATAAA	-12	NA	28339149	28338929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_28338900_28339100
Isoform_115878_7	chr9	-	156	1	Intergenic	novelGene_11638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAATAAAATAAATCTT	1757	False	NA	NA	False	NA	NA	NA	106095060	106094904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106094900_106095100
Isoform_115879_12	chr2	-	178	1	Intergenic	novelGene_6064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGGGGGGGGTGTCCA	NA	False	NA	NA	False	NA	NA	NA	28392788	28392610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_28392600_28392800
Isoform_115880_8	chr2	+	3979	1	Antisense	novelGene_ENSMUSG00000026669.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACCAAACCCCCCAAAAC	4504	False	NA	NA	False	NA	NA	NA	4998975	5002954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_4999000_5003000
Isoform_115885_6	chr2	+	176	1	Intergenic	novelGene_6065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATAAGAAGGGA	5927	False	NA	NA	False	NA	NA	NA	28523410	28523586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_28523400_28523600
Isoform_115886_3	chr2	+	179	1	Intergenic	novelGene_6066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	28608446	28608625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_28608400_28608600
Isoform_115888_3	chrX	-	158	1	Intergenic	novelGene_12193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	134778908	134778750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_134778800_134778900
Isoform_11589_802	chr11	-	3401	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	231	295	231	0	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGTTCTGTCTGTGA	9689	False	NA	-6	True	AATAAA	-14	NA	6150184	6055985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
Isoform_11590_28	chr11	-	3641	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	-8	294	-8	1	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTCTGTCTGTGAC	9450	False	NA	-5	True	AATAAA	-15	NA	6150423	6055984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
Isoform_115907_2759	chr2	-	1253	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	-72	-181	-72	181	mono-exon	FALSE	NA	NA	NA	NA	NA	2759	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	28824693	28823440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_28823400_28824700
Isoform_115909_18	chr2	-	179	1	Intergenic	novelGene_6068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28919188	28919009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_28919000_28919200
Isoform_115913_115	chr2	+	176	1	Intergenic	novelGene_6069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAAGGTTCCAG	NA	False	NA	NA	False	NA	NA	NA	28937209	28937385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_28937200_28937400
Isoform_115914_21	chr2	+	177	1	Intergenic	novelGene_6070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	28939884	28940061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_28939900_28940100
Isoform_115915_32	chr2	+	182	1	Intergenic	novelGene_6071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAGGGACTGAG	NA	False	NA	NA	False	NA	NA	NA	28949261	28949443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_28949300_28949400
Isoform_115916_4	chr2	+	1459	1	NIC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	11	-19861	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGAAAACTACTAA	NA	False	NA	NA	False	NA	NA	NA	28950288	28951747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_+_28950300_28951700
Isoform_115917_9	chr2	-	171	1	Intergenic	novelGene_5946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	5034103	5033932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_5033900_5034100
Isoform_11592_16	chr11	-	3696	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	210	21	210	-21	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATCTTGGGGAGGAA	9668	False	NA	NA	False	NA	NA	NA	6150205	6055711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
Isoform_115922_8	chr2	+	176	1	Intergenic	novelGene_6072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	29018269	29018445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_29018300_29018400
Isoform_115923_9	chr2	-	169	1	Intergenic	novelGene_6073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	8753	False	NA	NA	False	NA	NA	NA	29046312	29046143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_29046100_29046300
Isoform_115924_14	chr2	+	183	1	Intergenic	novelGene_6074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAACGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	29057769	29057952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_29057800_29058000
Isoform_115941_4	chr2	+	174	1	Intergenic	novelGene_6075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAGAAGAAGAAGAAG	6122	False	NA	NA	False	NA	NA	NA	29197771	29197945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_29197800_29197900
Isoform_115943_26	chr2	+	179	1	Intergenic	novelGene_6076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	29332033	29332212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_29332000_29332200
Isoform_115944_3	chr2	+	175	1	Intergenic	novelGene_6077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGTATAAGATGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	29422482	29422657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_29422500_29422700
Isoform_115945_3	chr2	-	203	1	Intergenic	novelGene_6078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTTGGCAGGATGGCT	NA	False	NA	NA	False	NA	NA	NA	29447075	29446872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_29446900_29447100
Isoform_115946_7	chr2	-	170	1	Intergenic	novelGene_6079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGTATCTCAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	29451317	29451147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_29451100_29451300
Isoform_115948_7	chr2	-	292	1	Intergenic	novelGene_6080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29577804	29577512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_29577500_29577800
Isoform_115950_181	chr11	-	177	1	Intergenic	novelGene_1652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68731634	68731457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_68731500_68731600
Isoform_115951_7	chr1	-	157	1	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	6154615	6154458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_6154500_6154600
Isoform_11596_11	chr11	-	3263	5	NIC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	229	4	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	148.998951338592	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCTGTGACAGT	9687	False	NA	-2	True	AATAAA	-18	NA	6150186	6055981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6058356_6063242_6063432_6100494_6100628_6143153_6143477_6149942
Isoform_115962_12	chr2	-	159	1	Intergenic	novelGene_5947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4079	False	NA	NA	False	NA	NA	NA	5079788	5079629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_5079600_5079800
Isoform_115967_27	chr2	-	176	1	Intergenic	novelGene_6082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTTAGTTATTT	2129	False	NA	NA	False	NA	NA	NA	29786001	29785825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_29785800_29786000
Isoform_115973_6	chr2	+	3865	1	FSM	ENSMUSG00000057738.15	ENSMUST00000202286.2	1471	1	-1	-2393	1	2393	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29855689	29859554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_29855700_29859600
Isoform_115974_8	chr2	-	196	1	Intergenic	novelGene_6083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAGGAAAAAGAG	6669	False	NA	NA	False	NA	NA	NA	29863536	29863340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_29863300_29863500
Isoform_115975_7	chr3	-	1584	4	FSM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	2	1	2	-1	multi-exon	FALSE	canonical	3	15	junction_1	22.2161102706022	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGCATTTATTTT	NA	False	NA	-1	True	AATAAA	-19	NA	5641203	5625560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_5626821_5628224_5628333_5628679_5628790_5641097
Isoform_115976_8	chr3	-	1794	6	FSM	ENSMUSG00000040374.14	ENSMUST00000071280.8	1777	6	-15	-2	2	-2	multi-exon	FALSE	canonical	1	3	junction_4	21.3672646822189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTGTGCATTTATTT	NA	False	NA	-2	True	AATAAA	-18	NA	5641203	5625561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5635546_5635690_5641097
Isoform_115977_33	chr3	-	1652	5	FSM	ENSMUSG00000040374.14	ENSMUST00000059021.10	1749	5	96	1	2	-1	multi-exon	FALSE	canonical	3	32	junction_2	14.3592304807744	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGCATTTATTTT	NA	False	NA	-1	True	AATAAA	-19	NA	5641203	5625560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5641097
Isoform_115979_9	chr3	-	1591	4	NIC	ENSMUSG00000040374.14	novel	2051	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	25.9786236911983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGCATTTATTTTTG	NA	False	NA	1	True	AATAAA	-21	NA	5641204	5625558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_5626825_5628224_5628333_5628679_5628790_5641097
Isoform_115980_18	chr3	-	2203	5	FSM	ENSMUSG00000040289.9	ENSMUST00000042412.5	2423	5	218	2	-54	-2	multi-exon	FALSE	canonical	3	9	junction_1	1.11803398874989	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGTCTGTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	8732098	8728420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_8730125_8731004_8731087_8731331_8731416_8731561_8731638_8731841
Isoform_115982_967	chr3	-	677	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	104	2	104	-2	multi-exon	FALSE	canonical	3	890	junction_1	0.5	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCTGCCGTGGTTCTT	NA	False	NA	-3	True	NA	NA	NA	8988874	8867207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_8867475_8965045_8965228_8988646
Isoform_115984_23	chr3	-	496	2	NIC	ENSMUSG00000040269.6	novel	783	3	NA	NA	104	-1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTGCCGTGGTTCTTT	NA	False	NA	-2	True	NA	NA	NA	8988874	8867206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_8867475_8988646
Isoform_116001_1917	chr3	-	2069	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	244	4004	-1	1	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGGTTTCAATATTTAT	NA	False	NA	-27	True	AATAAA	-16	NA	9069539	8994656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_116002_1137	chr3	-	2243	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	232	3842	-13	163	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTCTTTTTATTTTTCT	NA	False	NA	-4	True	AATATA	-16	NA	9069551	8994494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_116003_4	chr8	-	1880	1	FSM	ENSMUSG00000094594.3	ENSMUST00000178097.3	523	1	-46	-1311	-46	1311	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGCAAACCAGAATTGA	NA	False	NA	NA	False	ACTAAA	-35	NA	80407481	80405601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_80405600_80407500
Isoform_116004_513	chr3	-	2324	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-12	4005	-12	0	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9069795	8994657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_116005_77	chr3	-	2353	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-41	4005	-41	0	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9069824	8994657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_116007_76	chr3	-	3065	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	217	3035	-28	-2	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGTTCTTTTTTATGTA	NA	False	NA	NA	False	AATAAA	-15	NA	9069566	8993687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_116008_275	chr3	-	2486	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-12	3843	-12	162	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTTTTTATTTTTC	NA	False	NA	-5	True	AATATA	-15	NA	9069795	8994495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_116039_205	chr3	-	2550	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	6	11278	6	-6	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGTTTTTCTATGT	NA	False	NA	-21	True	NA	NA	NA	9675139	9503357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
Isoform_11604_46	chr11	-	1869	14	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	280.168482699651	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGGTGTTGTCTGGCT	4519	False	NA	-5	True	NA	NA	NA	6217742	6208921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216918_6217417_6217580_6217659
Isoform_116040_150	chr3	-	2531	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-36	11339	-36	-67	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCATCTCTCTGTTTT	NA	False	NA	-7	True	TATAAA	-20	NA	9675181	9503418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
Isoform_116042_7	chr3	-	2611	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-116	11339	-116	-67	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCATCTCTCTGTTTT	NA	False	NA	-7	True	TATAAA	-20	NA	9675261	9503418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
Isoform_116043_12	chr3	-	7352	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	6	6476	6	4796	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTTTGTGATTTTGT	NA	False	NA	-13	True	TTTAAA	-6	NA	9675139	9498555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
Isoform_116044_11	chr3	-	2617	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-60	11277	-60	-5	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAGTTTTTCTATGTC	NA	False	NA	-20	True	NA	NA	NA	9675205	9503356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
Isoform_11606_1111	chr11	-	1923	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	30	3	4	-3	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGGTGTTGTCTGGCT	4519	False	NA	-5	True	NA	NA	NA	6217742	6208921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
Isoform_116064_231	chr3	-	2124	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	68	1993	1	5	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACCATTTTCTTTCATT	NA	False	NA	-7	True	ATTAAA	-22	NA	10396431	10379008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
Isoform_116065_127	chr3	-	2147	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	44	1994	-23	4	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATACCATTTTCTTTCAT	NA	False	NA	-8	True	ATTAAA	-21	NA	10396455	10379009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
Isoform_116080_10	chr3	-	4294	7	FSM	ENSMUSG00000039795.15	ENSMUST00000140634.2	743	7	-2690	-861	-1	-1	multi-exon	FALSE	canonical	3	339	junction_1	180.261846582502	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTATTGCATTTGATCTA	NA	False	NA	-4	True	AATAAA	-42	NA	10416375	10405015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569
Isoform_116083_372	chr3	-	1603	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	2	5	-1	-3	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTATTGCATTTGATC	NA	False	NA	-6	True	AATAAA	-40	NA	10416375	10405017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
Isoform_116085_9	chr3	-	1761	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	7	-158	3	158	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTCTTTGTCAGCTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	10416370	10404854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
Isoform_116087_72	chr3	-	4108	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	3	88	junction_7	242.301296668728	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTATTGCATTTGATC	NA	False	NA	-6	True	AATAAA	-40	NA	10416375	10405017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10416118_10416301
Isoform_116088_8	chr3	-	1889	8	NIC	ENSMUSG00000039795.15	novel	954	8	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	278.12741170704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTATTGCATTTGATCTA	NA	False	NA	-4	True	AATAAA	-42	NA	10416379	10405015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416228
Isoform_116089_79	chr3	-	1812	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	120	junction_6	235.712813848219	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGCATTTGATCTATA	NA	False	NA	-2	True	AATAAA	-44	NA	10416373	10405013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416301
Isoform_116091_20	chr3	-	4288	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	3	-25	combination_of_known_splicesites	FALSE	canonical	3	88	junction_7	262.710595794797	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTCCTGTAACAAAGC	NA	False	NA	-28	True	AATAAA	-18	NA	10416370	10405039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10416118_10416301
Isoform_116093_24	chr3	-	1874	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-23	intron_retention	FALSE	canonical	3	120	junction_5	243.390404266251	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCCTGTAACAAAGCGA	NA	False	NA	-26	True	AATAAA	-20	NA	10416376	10405037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412472_10413569_10413613_10416301
Isoform_116098_84	chr3	-	2286	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	2	0	2	0	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGAGTTTCTTTAGT	NA	False	NA	1	True	ATTAAA	-20	NA	10505145	10483205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
Isoform_116102_17	chr3	-	2619	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	-3	-328	-3	-1	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGAGTGTTATCAGTGT	NA	False	NA	1	True	AATAAA	-26	NA	10505150	10482877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
Isoform_116103_13	chr3	-	2183	7	FSM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	0	329	0	0	multi-exon	FALSE	canonical	3	23	junction_1	44.7837396086273	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGAGTTTCTTTAGT	NA	False	NA	1	True	ATTAAA	-20	NA	10505162	10483205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
Isoform_116108_1212	chr3	-	399	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	30	6	-1	-1	multi-exon	FALSE	canonical	3	4849	junction_3	245.494512271773	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTTCTTTAAATCTT	NA	False	NA	-6	True	AATAAA	-17	NA	14676315	14671349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
Isoform_116112_53	chr3	-	1166	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	6	2	-1	2	multi-exon	FALSE	canonical	3	4849	junction_2	211	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATTTCTTTAAATCT	NA	False	NA	-7	True	AATAAA	-16	NA	14676315	14671350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_14672354_14674600_14674718_14676269
Isoform_116113_15	chr3	-	831	2	FSM	ENSMUSG00000078784.9	ENSMUST00000190064.2	508	2	-9	-314	2	314	multi-exon	FALSE	canonical	3	4849	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14676312	14673929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_14674718_14676269
Isoform_116115_6	chr3	-	1664	5	NIC	ENSMUSG00000039519.7	novel	2166	6	NA	NA	-1	-327	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	6.28490254498827	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTCATGGCAATCA	NA	False	NA	NA	False	AATAAA	-16	NA	18297503	18126440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_18126918_18150686_18150894_18151367_18151959_18157864_18158002_18297251
Isoform_116117_373	chr3	-	2933	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	-9	749	-9	-749	multi-exon	TRUE	canonical	3	251	junction_6	16.1761140780679	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAGCAGTTATTGTAT	NA	False	NA	-13	True	AATAAA	-13	NA	19217238	19186314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
Isoform_116124_3	chr3	-	3394	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	1	1348	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.5594647204927	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTTGCACTCTACCT	NA	False	NA	-2	True	AATAAA	-20	NA	19365485	19280200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
Isoform_116127_110	chr3	-	3349	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	2	2947	2	1330	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTCTTTGCTCATTGGTT	NA	False	NA	-20	True	AATAAA	-2	NA	19365484	19280218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
Isoform_116128_37	chr3	-	3436	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-85	2947	-85	1330	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTCTTTGCTCATTGGTT	NA	False	NA	-20	True	AATAAA	-2	NA	19365571	19280218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
Isoform_116129_20	chr3	-	6316	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365504	19277271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
Isoform_116130_7	chr3	-	6381	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-85	2	-85	-2	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCAAAGTCTACCTGTC	NA	False	NA	NA	False	TATAAA	-21	NA	19365571	19277273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
Isoform_116132_7	chr3	-	3597	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-246	2947	-246	1330	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTCTTTGCTCATTGGTT	NA	False	NA	-20	True	AATAAA	-2	NA	19365732	19280218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
Isoform_116136_3	chr3	-	3254	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-5	1330	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	59.228790184984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTCTTTGCTCATTGGTT	NA	False	NA	-20	True	AATAAA	-2	NA	19365473	19280218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19314395_19314457_19365027
Isoform_116138_5	chr3	-	3197	11	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-42	1350	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	61.2409176939732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGCACTCTACCTTA	NA	False	NA	0	True	AATAAA	-22	NA	19365528	19280198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
Isoform_116139_6	chr3	-	3404	17	FSM	ENSMUSG00000027615.15	ENSMUST00000108321.2	3385	17	-13	-6	0	3	multi-exon	FALSE	canonical	2	2	junction_16	13.1101106021269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATAATTTCCTATGTT	NA	False	NA	NA	False	AATAAA	-24	NA	20089479	20050324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084574_20089212
Isoform_11614_22	chr11	-	2638	13	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	3	-5	intron_retention	FALSE	canonical	3	937	junction_7	74.5961348417821	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGGTGGTGTTGTCTGG	4518	False	NA	-7	True	NA	NA	NA	6217743	6208923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
Isoform_116140_48	chr3	-	3739	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	41	236	6	-14	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATGATGTTCAAATCT	NA	False	NA	NA	False	AATAAA	-4	NA	20089438	20050344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
Isoform_116143_15	chr3	-	4001	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	14	1	1	-1	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGCATGTGTCCTTCA	NA	False	NA	NA	False	NA	NA	NA	20089465	20050109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
Isoform_116144_4	chr3	-	3676	16	NIC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	6	junction_3	13.8490272422129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTAATAATTTCCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	20089466	20050327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_20051194_20056486_20056578_20057388_20057596_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
Isoform_116145_8	chr3	-	2754	10	FSM	ENSMUSG00000027615.15	ENSMUST00000137408.8	3395	10	19	622	5	-622	multi-exon	FALSE	canonical	3	37	junction_6	8.31330927555995	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGGTATATCTTTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	20089439	20067308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
Isoform_116146_33	chr3	-	1712	7	FSM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	-11	-3	-11	0	multi-exon	FALSE	canonical	3	45	junction_2	8.93805845186128	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	False	NA	-2	True	AATAAA	-15	NA	20209271	20176247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
Isoform_116147_51	chr3	-	1669	7	FSM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	32	-3	5	0	multi-exon	FALSE	canonical	3	45	junction_2	8.93805845186128	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	False	NA	-2	True	AATAAA	-15	NA	20209228	20176247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
Isoform_116165_37	chr3	-	4052	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	158.116957415143	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTTTTATGTGTCCTG	1868	False	NA	NA	False	AATAAA	-16	NA	27207969	27151374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203219_27204177_27204330_27207851
Isoform_116168_28	chr3	-	4127	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_24	156.17538218298	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1877	False	NA	NA	False	AATAAA	-17	NA	27207960	27151373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207771
Isoform_116170_1096	chr3	-	4069	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1858	False	NA	NA	False	AATAAA	-20	NA	27207979	27151370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
Isoform_116173_111	chr3	-	4118	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1809	False	NA	NA	False	AATAAA	-20	NA	27208028	27151370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
Isoform_116177_473	chr3	-	4061	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	25	0	-8	0	multi-exon	FALSE	canonical	3	272	junction_24	111.161098998506	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1852	False	NA	NA	False	AATAAA	-20	NA	27207985	27151370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
Isoform_116178_52	chr3	-	4098	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	-18	6	-1	-2	multi-exon	FALSE	canonical	3	272	junction_24	111.161098998506	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTATCTTTTATGTGTCC	1809	False	NA	NA	False	AATAAA	-14	NA	27208028	27151376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
Isoform_116182_34	chr3	-	3979	24	FSM	ENSMUSG00000027699.20	ENSMUST00000108298.9	4024	24	42	3	-8	1	multi-exon	FALSE	canonical	3	28	junction_21	160.816383688852	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1852	False	NA	NA	False	AATAAA	-17	NA	27207985	27151373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207851
Isoform_116191_10	chr3	-	4464	6	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	253716	0	253716	0	3prime_fragment	FALSE	canonical	3	78	junction_4	12.8996123972777	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	False	NA	-25	True	AATAAA	-18	NA	27510831	27470310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597
Isoform_116195_3	chr3	-	6862	26	FSM	ENSMUSG00000039286.13	ENSMUST00000046157.10	6875	26	13	0	13	0	multi-exon	FALSE	canonical	1	7	junction_25	20.0419559923676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	False	NA	-25	True	AATAAA	-18	NA	27764575	27470310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27764494
Isoform_116196_39	chr3	-	6973	26	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	63	junction_25	12.8644626782466	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	NA	False	NA	-24	True	AATAAA	-19	NA	27765459	27470309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
Isoform_116198_29	chr3	-	7214	26	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53522	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_25	16.7382675328123	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	271	False	NA	-25	True	AATAAA	-18	NA	27711025	27470310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592
Isoform_11620_20	chr11	-	2176	4	FSM	ENSMUSG00000004394.13	ENSMUST00000130621.2	886	4	0	-1290	0	-2	multi-exon	FALSE	canonical	3	463	junction_2	40.4337592722825	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAATTCTCCCTTTGTT	5338	False	NA	NA	False	ATTAAA	-22	NA	6224870	6220370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397
Isoform_116200_12	chr3	-	6766	24	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-19	3	combination_of_known_splicesites	FALSE	canonical	2	13	junction_8	20.3423441147567	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTAGGGTTCTTCAGCCT	NA	False	NA	-22	True	AATAAA	-21	NA	27765475	27470307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
Isoform_116202_6	chr3	-	6995	24	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53522	6	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	23.0471695156761	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTTCTTCAGCCTTGA	271	False	NA	-19	True	AATAAA	-24	NA	27711025	27470304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592
Isoform_116204_18	chr3	-	4442	7	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	253664	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	34.8456915876586	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	NA	False	NA	-24	True	AATAAA	-19	NA	27510883	27470309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27510822
Isoform_116205_136	chr3	-	1829	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	61	1	61	-1	multi-exon	FALSE	canonical	3	297	junction_6	40.0710618776194	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCTTGAGTTTAGA	NA	False	NA	-19	True	AATAAA	-18	NA	30701957	30678416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
Isoform_116206_142	chr3	-	1778	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	112	1	112	-1	multi-exon	TRUE	canonical	3	297	junction_6	40.0710618776194	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCTTGAGTTTAGA	NA	False	NA	-19	True	AATAAA	-18	NA	30701906	30678416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
Isoform_116209_55	chr3	-	1876	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	12	3	12	-3	multi-exon	FALSE	canonical	3	297	junction_6	40.0710618776194	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGACTGTCTTGAGTTTA	NA	False	NA	-21	True	AATAAA	-16	NA	30702006	30678418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
Isoform_11621_94	chr11	-	1971	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	30	2	25	-2	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAATTCTCCCTTTGTT	5368	False	NA	NA	False	ATTAAA	-22	NA	6224840	6220370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
Isoform_116218_4	chr3	-	4546	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	3	-2963	3	2963	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGCTTTTTTTCTTGT	NA	False	NA	0	True	AATAAA	-15	NA	30753976	30730243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
Isoform_116219_8	chr3	-	4494	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	-80	-2828	-67	2828	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATATTTGAGTTTGTT	NA	False	NA	-18	True	AATAAA	-23	NA	30754059	30730378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
Isoform_116223_3	chr3	-	4473	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-57	2835	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	17.8815547422477	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTTTGTTTTCTTTT	NA	False	NA	-11	True	AATAAA	-30	NA	30754049	30730371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749762_30753847
Isoform_116224_3	chr3	-	4406	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-6	2832	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	17.8815547422477	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGAGTTTGTTTTCT	NA	False	NA	-14	True	AATAAA	-27	NA	30753985	30730374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749762_30753847
Isoform_116225_5	chr3	-	4443	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	1	2834	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	17.8985858379929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTTTTCTTT	NA	False	NA	-12	True	AATAAA	-29	NA	30753978	30730372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745474_30749635_30749780_30753847
Isoform_116228_7	chr3	-	729	2	FSM	ENSMUSG00000074653.11	ENSMUST00000130731.2	705	2	-21	-3	-1	3	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCTTCAGTTTGTAT	NA	False	NA	-4	True	AGTAAA	-23	NA	30753980	30752267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_30752864_30753847
Isoform_11623_154	chr11	-	1628	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	30	345	25	-345	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAATAATAGAT	5368	False	NA	-1	True	AATAAA	-16	NA	6224840	6220713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
Isoform_116230_5	chr3	-	980	3	ISM	ENSMUSG00000037652.16	ENSMUST00000099163.5	2808	9	-2	31990	-2	-2724	5prime_fragment	FALSE	canonical	3	8	junction_2	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	31023566	31015259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_31016033_31019921_31020085_31023522
Isoform_116233_49	chr3	-	2387	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	-18	5428	-18	-5424	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGAGTGTTATATGTG	NA	False	NA	-21	True	AATAAA	-26	NA	32419845	32394368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
Isoform_116234_15	chr3	-	2412	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	-50	5435	-50	-5431	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGACTGATGGAGTGTT	NA	False	NA	-28	True	AATAAA	-19	NA	32419877	32394375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
Isoform_116240_69	chr3	-	2281	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	51	3665	-5	1	multi-exon	FALSE	canonical	3	60	junction_8	7.61253028131584	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTACTTTTCCATTTTT	NA	False	NA	-1	True	TATAAA	-17	NA	32670683	32638145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
Isoform_116241_14	chr3	-	2759	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	45	3193	-11	473	multi-exon	FALSE	canonical	3	60	junction_8	7.61253028131584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGAGTTTTCATCCTT	NA	False	NA	NA	False	NA	NA	NA	32670689	32637673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
Isoform_116244_9	chr3	-	5966	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	28	3	28	-3	multi-exon	TRUE	canonical	3	60	junction_8	7.61253028131584	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCACTGTACCTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	32670706	32634483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
Isoform_116248_348	chr3	-	864	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	399	2101	399	77	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGTTGTTCTTCTAGC	NA	False	NA	-12	True	TATAAA	-20	NA	32790897	32781646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
Isoform_116250_16	chr3	-	2776	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	378	210	378	-210	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCAGAGTGGTGTTC	NA	False	NA	NA	False	AATAAA	-10	NA	32790918	32779755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
Isoform_116258_892	chr3	-	561	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	25	73	14	2	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	892	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTGTCTTGGTATATT	NA	False	NA	-2	True	NA	NA	NA	34135445	34131500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
Isoform_116266_3	chr3	-	688	4	FSM	ENSMUSG00000105153.5	ENSMUST00000198364.2	675	4	-14	1	-14	-1	multi-exon	FALSE	canonical	3	4	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTTGTTAAGCTCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	34770825	34763772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_34764079_34764315_34764508_34768115_34768187_34770706
Isoform_116273_85	chr3	-	2787	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	635	1558	-1	-157	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATTTGTGTGTGGCCTA	NA	False	NA	-2	True	CATAAA	-20	NA	35986986	35947811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
Isoform_116274_73	chr3	-	3464	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	641	875	5	526	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCTCCCATATTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	35986980	35947128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
Isoform_116276_19	chr3	-	3047	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	600	1333	-36	68	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTGATTTAATGTGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	35987021	35947586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
Isoform_11628_15	chr11	-	1621	5	NIC	ENSMUSG00000004394.13	novel	2003	5	NA	NA	25	-345	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	203.804287246368	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAATAATAGAT	5368	False	NA	-1	True	AATAAA	-16	NA	6224840	6220713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224680
Isoform_116282_9	chr3	-	3525	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	574	881	-62	520	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTAAATCTTCTCCCATA	NA	False	NA	NA	False	AATAAA	-20	NA	35987047	35947134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
Isoform_116283_23	chr3	-	4347	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	635	-2	-1	2	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTATTGCTTCCATTT	NA	False	NA	2	True	TATAAA	-19	NA	35986986	35946251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
Isoform_116287_11	chr3	-	2657	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-1	-156	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTGTGTGGCCTAA	NA	False	NA	-1	True	CATAAA	-21	NA	35986986	35947810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
Isoform_116288_8	chr3	-	3371	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-36	523	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCTTCTCCCATATTA	NA	False	NA	NA	False	AATAAA	-23	NA	35987021	35947131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
Isoform_11629_7	chr11	-	1983	5	NIC	ENSMUSG00000004394.13	novel	2003	5	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	203.804287246368	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAATTCTCCCTTTGTTT	5350	False	NA	NA	False	ATTAAA	-23	NA	6224858	6220369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224680
Isoform_116295_417	chr3	-	2414	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	36	5	-1	1	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGACTGAGCTGTAGTT	NA	False	NA	NA	False	TATAAA	-23	NA	36054791	36013986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
Isoform_116296_10	chr3	-	2978	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	0	-523	0	2	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTCTGC	NA	False	NA	NA	False	NA	NA	NA	36054827	36013458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
Isoform_116297_41	chr3	-	2955	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	22	-522	-15	1	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTCTG	NA	False	NA	NA	False	NA	NA	NA	36054805	36013459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
Isoform_116300_8	chr3	-	3903	18	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-13	1	intron_retention	FALSE	canonical	3	210	junction_7	27.4612025785256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGACTGAGCTGTAGTT	NA	False	NA	NA	False	TATAAA	-23	NA	36054771	36013986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
Isoform_116301_60	chr3	-	1498	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	230	3	-5	-3	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTGTGTAGGTTTGTG	NA	False	NA	0	True	AATAAA	-18	NA	36529813	36503074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
Isoform_116302_52	chr3	-	1551	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	176	4	-59	-4	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATCCTGTGTAGGTTTGT	NA	False	NA	-1	True	AATAAA	-17	NA	36529867	36503075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
Isoform_116303_4	chr3	-	1694	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	35	2	35	-2	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTGTAGGTTTGTGT	NA	False	NA	1	True	AATAAA	-19	NA	36530008	36503073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
Isoform_116315_1645	chr3	-	2779	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	184	2	-2	-2	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	1645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATTTGGTGGGCTGTG	NA	False	NA	-9	True	AATAAA	-19	NA	36626115	36619015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
Isoform_11632_1948	chr11	-	692	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	29	912	29	-3	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	1948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTGTGTCTCAGTAT	NA	False	NA	-6	True	GATAAA	-13	NA	6394414	6378140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
Isoform_11633_70	chr11	-	731	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	-10	912	-10	-3	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTGTGTCTCAGTAT	NA	False	NA	-6	True	GATAAA	-13	NA	6394453	6378140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
Isoform_116330_49	chr3	-	2596	19	FSM	ENSMUSG00000037325.11	ENSMUST00000108156.9	2687	19	86	5	-2	-5	multi-exon	FALSE	canonical	3	20	junction_12	6.84754619472471	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATACTTGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	36667540	36627295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666160_36666227_36667398
Isoform_116331_13	chr3	-	1078	5	FSM	ENSMUSG00000045031.19	ENSMUST00000102955.11	1064	5	-9	-5	-9	5	multi-exon	TRUE	canonical	3	18	junction_2	3.41869858279434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTTCTGGTAGTTACTG	NA	False	NA	NA	False	AATAAA	-26	NA	37366604	37362765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_37363331_37363493_37363632_37364085_37364215_37364441_37364589_37366505
Isoform_116332_5	chr3	-	903	4	FSM	ENSMUSG00000045031.19	ENSMUST00000075537.7	762	4	-8	-133	-8	-5	multi-exon	FALSE	canonical	1	1	junction_1	11.7851130197758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTAAGTATCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	37366577	37362775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_37363331_37364085_37364215_37364441_37364589_37366505
Isoform_116333_13	chr3	-	1076	5	FSM	ENSMUSG00000050174.16	ENSMUST00000052645.13	1155	5	-1	80	-1	-4	multi-exon	FALSE	canonical	1	4	junction_4	11.8743420870379	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGATTGTAGCTCTAA	NA	False	NA	-18	True	AATAAA	-11	NA	37473746	37459138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473490
Isoform_116336_8	chr3	-	5264	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	17.3781471969828	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCTTCAGCATTGGATA	NA	False	NA	-1	True	AATAAA	-28	NA	38538993	38506216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38537717_38538819
Isoform_116339_9	chr3	-	8095	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	7.49583217528247	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTGGTTTAATTTCG	NA	False	NA	NA	False	AATAAA	-19	NA	38538991	38503800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38538134_38538819
Isoform_116340_3	chr3	-	8501	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	7.49583217528247	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTGAGTCCCTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	38539008	38503411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38538134_38538819
Isoform_116341_10	chr3	-	2995	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	137	19	-54	-19	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCATATTTCCAGTAC	NA	False	NA	-3	True	AATAAA	-15	NA	40801183	40772556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
Isoform_116342_5	chr3	-	3103	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	32	16	32	-16	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATATTTCCAGTACATA	NA	False	NA	0	True	AATAAA	-18	NA	40801288	40772553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
Isoform_116345_3	chr3	-	2963	12	NNC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	-23	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	9.36231235122945	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCATATTTCCAGTACA	NA	False	NA	-2	True	AATAAA	-16	NA	40801152	40772555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793939_40801075
Isoform_116346_94	chr3	-	2613	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	39	355	39	-355	multi-exon	FALSE	canonical	3	569	junction_2	17	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTTAATTCCAGTCAAA	NA	False	NA	-9	True	AATAAA	-16	NA	41037442	41021115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_41023160_41024714_41024871_41037029
Isoform_116347_599	chr3	-	1793	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	39	1175	39	1019	multi-exon	FALSE	canonical	3	569	junction_2	17	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAATAAGCTCGAGTCG	NA	False	NA	NA	False	AATAAA	-13	NA	41037442	41021935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_41023160_41024714_41024871_41037029
Isoform_116349_25	chr3	-	2647	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	16	344	16	-344	multi-exon	FALSE	canonical	3	569	junction_2	17	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCAAATGTCTCATTGT	NA	False	NA	2	True	AATAAA	-27	NA	41037465	41021104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_41023160_41024714_41024871_41037029
Isoform_11635_141	chr11	-	1601	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	30	2	30	-2	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATGTGTCCTGGTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	6394413	6377230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
Isoform_116350_47	chr3	-	2956	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	39	12	39	-12	multi-exon	FALSE	canonical	3	569	junction_2	17	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTCCAATTCTGTAC	NA	False	NA	NA	False	AATAAA	-14	NA	41037442	41020772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_41023160_41024714_41024871_41037029
Isoform_116356_10	chr3	-	836	4	Fusion	ENSMUSG00000105260.2_ENSMUSG00000097639.3	novel	504	2	NA	NA	-1	-5	multi-exon	FALSE	canonical	3	51	junction_3	13.2748718344933	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGCAAGCTCTCCTT	NA	False	NA	-15	True	AGTAAA	-11	NA	41447626	41432016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_-_41432228_41436231_41436380_41436506_41436880_41447522
Isoform_116362_22	chr3	-	1096	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	1	1064	1	61	multi-exon	FALSE	canonical	3	87	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATTTGTCAATTTTTA	NA	False	NA	58	True	NA	NA	NA	41447624	41443177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_41444172_41447522
Isoform_116363_11	chr3	-	4376	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	1	-2216	1	-1439	multi-exon	FALSE	canonical	3	87	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGGACTCTTAACTGTG	NA	False	NA	NA	False	TTTAAA	-4	NA	41447624	41439897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_41444172_41447522
Isoform_116364_4	chr3	-	4344	2	FSM	ENSMUSG00000097639.3	ENSMUST00000181833.2	986	2	-17	-3341	-17	-1439	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGGACTCTTAACTGTG	NA	False	NA	NA	False	TTTAAA	-4	NA	41447644	41439897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_41444172_41447574
Isoform_116365_15	chr3	-	610	3	FSM	ENSMUSG00000106223.2	ENSMUST00000199633.2	643	3	20	13	-10	-13	multi-exon	FALSE	canonical	3	84	junction_1	18	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGTTGATGTCAATGGAC	NA	False	NA	-15	True	AATAAA	-14	NA	41482889	41476651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_41476891_41477364_41477680_41482833
Isoform_116366_8	chr3	-	483	3	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	0	-15	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	5.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGGTTGATGTCAATGG	NA	False	NA	-17	True	AATAAA	-12	NA	41482879	41476653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_41476891_41477364_41477565_41482833
Isoform_116370_38	chr3	-	3012	21	FSM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	-11	4	-11	-4	multi-exon	FALSE	canonical	3	23	junction_17	7.74919350642375	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTTGTCATGTAT	NA	False	NA	NA	False	AATAAA	-14	NA	41696960	41581158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
Isoform_116373_6	chr3	-	4426	2	FSM	ENSMUSG00000090919.7	ENSMUST00000166505.7	5218	2	-27	819	-27	-819	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATGCCTTCAGCCAG	NA	False	NA	NA	False	AATAAA	-16	NA	46402403	46397450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_46401725_46402251
Isoform_116374_28	chr3	-	577	2	FSM	ENSMUSG00000037910.3	ENSMUST00000036023.3	593	2	16	0	16	0	multi-exon	FALSE	canonical	3	53	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTTTAGATGTGTCT	NA	False	NA	0	True	AATAAA	-42	NA	48563521	48560166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_48560355_48563132
Isoform_116376_5	chr3	-	2227	12	FSM	ENSMUSG00000027737.11	ENSMUST00000029297.6	9223	12	26	6970	20	-2059	multi-exon	FALSE	canonical	2	3	junction_8	2.75740925238238	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTGAAAGTATTTTG	8857	False	NA	NA	False	TATAAA	-26	NA	50398034	50326356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_50326816_50332012_50332191_50333483_50333634_50335420_50335518_50336323_50336428_50338492_50338617_50372436_50372482_50378490_50378591_50382099_50382226_50389797_50389914_50393237_50393365_50397433
Isoform_116383_194	chr3	-	2932	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	17	-435	17	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51184918	51162650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
Isoform_116389_11	chr3	-	2992	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	-43	-435	18	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51184978	51162650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
Isoform_11639_184	chr11	-	578	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	-62	3	29	-3	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTGTGTCTCAGTAT	NA	False	NA	-6	True	GATAAA	-13	NA	6394414	6378140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
Isoform_116391_8	chr3	-	3471	11	NIC	ENSMUSG00000037174.19	novel	3353	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	93.351004279547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51248079	51162650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51207203_51207307_51215470_51215637_51230642_51230873_51233368_51233457_51247834
Isoform_116394_32	chr3	-	3384	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	-31	0	-12	0	multi-exon	FALSE	canonical	3	55	junction_9	81.5267887503894	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGTTTTGGTCTCT	NA	False	NA	-7	True	AATATA	-13	NA	51248096	51162651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
Isoform_116399_84	chr3	-	2965	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	81	-435	20	0	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51184915	51162650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
Isoform_116405_39	chr3	-	3404	10	FSM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	5	2510	0	0	multi-exon	FALSE	canonical	3	55	junction_9	82.9231385897823	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51248079	51162650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
Isoform_116406_14	chr3	-	2999	10	FSM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	-31	2951	-31	-6	multi-exon	FALSE	canonical	3	55	junction_9	82.9231385897823	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTGTACCTAGCAC	NA	False	NA	NA	False	ATTAAA	-12	NA	51248115	51163091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
Isoform_11641_6	chr11	-	935	6	ISM	ENSMUSG00000020437.13	ENSMUST00000003459.4	3307	22	10677	3	-1596	-3	3prime_fragment	FALSE	canonical	3	8	junction_3	3.74165738677394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTGGCTGCCACTGCT	9698	False	NA	-3	True	AATAAA	-17	NA	6460281	6456550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_6456833_6456906_6457062_6457868_6457983_6458189_6458295_6459324_6459470_6460147
Isoform_116410_14	chr3	-	1393	4	FSM	ENSMUSG00000037161.15	ENSMUST00000108046.8	1409	4	14	2	-9	-2	multi-exon	FALSE	canonical	0	0	junction_3	91.1604202613295	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTCTAGTCTTTCTTG	NA	False	NA	-2	True	AATAAA	-15	NA	51303933	51295834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303648
Isoform_116411_158	chr3	-	1218	4	FSM	ENSMUSG00000037161.15	ENSMUST00000038154.12	1232	4	10	4	10	-4	multi-exon	FALSE	canonical	3	186	junction_2	9.84321537348893	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTTTCTAGTCTTTCT	NA	False	NA	-4	True	AATAAA	-13	NA	51303959	51295836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847
Isoform_116417_1808	chr3	-	418	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	53	778	29	0	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	1808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGATGGACTCTTACTT	NA	False	NA	-9	True	AATAAA	-41	NA	51316356	51312875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
Isoform_116418_131	chr3	-	428	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	26	795	2	6	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGAGTCACTGGTCAGTG	NA	False	NA	-26	True	AATAAA	-24	NA	51316383	51312892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
Isoform_116421_3	chr3	-	7174	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	220	17	220	-17	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAATATACAATCTCC	NA	False	NA	-17	True	AGTAAA	-45	NA	51468080	51422756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
Isoform_116422_4	chr3	-	1893	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	216	5302	216	-5302	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTCTCTCTGGTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	51468084	51428041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
Isoform_116423_8	chr3	-	1791	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	220	5400	220	-5400	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCCCAGTGTTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	51468080	51428139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
Isoform_116424_3	chr3	-	5007	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	254	2150	254	-2150	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTATGTGACACTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51468046	51424889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
Isoform_116426_304	chr3	-	2913	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	21	248	0	-1	multi-exon	TRUE	canonical	3	106	junction_7	14.5610676585896	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGTAGTATTTTTAT	NA	False	NA	-2	True	ATTAAA	-17	NA	52924637	52889543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
Isoform_116429_36	chr3	-	4986	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	56	5	21	0	multi-exon	FALSE	canonical	3	23	junction_4	5.77350269189626	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATTGGCTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	53370697	53356008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
Isoform_11643_4	chr11	-	3306	22	NIC	ENSMUSG00000020437.13	novel	3307	22	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_15	5.07539527408542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGCCACTGCTTTG	6523	False	NA	0	True	AATAAA	-20	NA	6469524	6456547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6456833_6456906_6457062_6457868_6457983_6458189_6458295_6459324_6459470_6460147_6460372_6460867_6461076_6461482_6461650_6462160_6462294_6462462_6462538_6464466_6464538_6464751_6464923_6465093_6465209_6465848_6465995_6466078_6466304_6466747_6466865_6467086_6467198_6467569_6467624_6467851_6468018_6468733_6468828_6468978_6469188_6469308
Isoform_116431_4	chr3	-	5228	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	-181	0	-181	0	multi-exon	FALSE	canonical	3	23	junction_4	5.77350269189626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGCTTTATTCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	53370934	53356003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
Isoform_116432_20	chr3	-	4840	6	FSM	ENSMUSG00000042997.14	ENSMUST00000130348.2	4885	6	46	-1	20	1	multi-exon	FALSE	canonical	3	21	junction_4	7.03135833249878	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTATTGGCTTTATTC	NA	False	NA	NA	False	AATAAA	-13	NA	53370698	53356007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369732_53369886_53370480
Isoform_116434_71	chr3	-	981	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	30	3879	30	567	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGTCTTTTTGAGGATT	NA	False	NA	-5	True	AATAAA	-22	NA	53771221	53764675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_116435_56	chr3	-	1648	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	24	3218	24	1228	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGTCTTCAGGAACA	NA	False	NA	NA	False	AATAAA	-17	NA	53771227	53764014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_116437_29	chr3	-	1990	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	27	2873	27	1573	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCTTGTCAGTAATG	NA	False	NA	-3	True	ATTAAA	-25	NA	53771224	53763669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_116439_10	chr3	-	2139	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	24	2727	24	1719	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGTTTTAGGCATGGTAT	NA	False	NA	NA	False	AATAAA	-25	NA	53771227	53763523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_11644_5	chr11	-	3307	22	FSM	ENSMUSG00000020437.13	ENSMUST00000003459.4	3307	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	5.11677690501468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGCCACTGCTTTG	5089	False	NA	0	True	AATAAA	-20	NA	6470958	6456547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6456833_6456906_6457062_6457868_6457983_6458189_6458295_6459324_6459470_6460147_6460372_6460867_6461076_6461482_6461650_6462160_6462294_6462462_6462538_6464466_6464538_6464751_6464923_6465093_6465209_6465848_6465995_6466078_6466304_6466747_6466865_6467086_6467198_6467569_6467624_6467851_6468018_6468733_6468828_6468978_6469188_6470741
Isoform_116440_4	chr3	-	2231	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	5	2654	5	1792	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCATGGCTACCTTTAT	NA	False	NA	NA	False	AATACA	-14	NA	53771246	53763450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_116441_3	chr3	-	2334	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	30	2526	30	1920	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCAATCCTTTATACA	NA	False	NA	NA	False	AATAAA	-12	NA	53771221	53763322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_116442_3	chr3	-	4869	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	25	-4	25	4	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTGATAAGTTGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	53771226	53760792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_116449_1717	chr3	-	947	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	347	6	0	-2	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATTTCTAGTCCTTAC	NA	False	NA	-18	True	AATAAA	-21	NA	54642467	54636104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
Isoform_11645_9	chr11	-	2646	2	FSM	ENSMUSG00000064513.3_ENSMUSG00000085156.9	ENSMUST00000129570.3	1631	2	-1014	-1	6	0	multi-exon	FALSE	canonical	3	446	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478773	6475590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6475818_6476354
Isoform_116451_23	chr3	-	1265	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	29	6	3	-2	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATTTCTAGTCCTTAC	NA	False	NA	-18	True	AATAAA	-21	NA	54642785	54636104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
Isoform_116454_23	chr3	-	961	11	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	87	junction_6	627.010334843055	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATTTCTAGTCCTTAC	NA	False	NA	-18	True	AATAAA	-21	NA	54642469	54636104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639651_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
Isoform_116460_43	chr3	-	1828	9	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	1645	junction_8	201.288932569578	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642455	54636105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
Isoform_11647_12	chr11	-	769	3	FSM	ENSMUSG00000085156.9	ENSMUST00000124818.3	771	3	0	2	0	-1	multi-exon	FALSE	canonical	3	446	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGTTGATCGGGTTT	NA	False	NA	-3	True	NA	NA	NA	6478766	6475592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6475818_6476354_6476438_6478305
Isoform_116472_91	chr3	-	2160	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	2	0	2	0	multi-exon	FALSE	canonical	3	271	junction_1	17.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTCTGCTGTACTTATTT	NA	False	NA	0	True	ATTAAA	-21	NA	54715210	54710535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_54711997_54712780_54712889_54714619
Isoform_116474_348	chr3	-	1063	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	20	1079	20	27	multi-exon	FALSE	canonical	3	271	junction_1	17.5	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTCATATCACTGTGA	NA	False	NA	-1	True	AATAAA	-24	NA	54715192	54711614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_54711997_54712780_54712889_54714619
Isoform_116475_110	chr3	-	1085	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	-2	1079	-2	27	multi-exon	FALSE	canonical	3	271	junction_1	17.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTCATATCACTGTGA	NA	False	NA	-1	True	AATAAA	-24	NA	54715214	54711614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_54711997_54712780_54712889_54714619
Isoform_11648_195	chr11	-	597	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	14	0	1	0	multi-exon	FALSE	canonical	3	436	junction_3	5.24933858267454	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478765	6475590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
Isoform_116482_300	chr3	-	4673	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	23	1	23	-1	multi-exon	TRUE	canonical	3	192	junction_3	19.06494747494	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGCCTTTGTTTCTGT	NA	False	NA	-7	True	AATAAA	-16	NA	57483226	57363070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
Isoform_116487_8	chr3	-	4578	7	FSM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	87	-132	5	-1	multi-exon	FALSE	canonical	2	7	junction_6	83.079112229783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGCCTTTGTTTCTGT	NA	False	NA	-7	True	AATAAA	-16	NA	57483244	57363070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483134
Isoform_116489_496	chr3	-	974	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	8	2010	1	0	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCTAGACAGTTC	NA	False	NA	-11	True	AATAAA	-19	NA	57559128	57553779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
Isoform_116495_7	chr3	-	2032	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	301	9	-229	1	multi-exon	FALSE	canonical	3	22	junction_1	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCCATTGGACTCCTG	NA	False	NA	-5	True	AATAAA	-14	NA	57755199	57749324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_57750736_57752594_57752788_57754771
Isoform_116496_36	chr3	-	1790	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	543	9	13	1	multi-exon	FALSE	canonical	3	22	junction_1	7	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCCATTGGACTCCTG	NA	False	NA	-5	True	AATAAA	-14	NA	57754957	57749324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_57750736_57752594_57752788_57754771
Isoform_116499_771	chr3	-	2323	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	128	2160	128	-2160	multi-exon	FALSE	canonical	3	847	junction_1	36.5	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATGATTTTGCAGA	NA	False	NA	10	True	AATAAA	-28	NA	58433185	58429397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_58431290_58432503_58432580_58432830
Isoform_11650_47	chr11	-	647	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	-38	2	-38	-1	multi-exon	FALSE	canonical	3	436	junction_3	5.24933858267454	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGTTGATCGGGTTT	NA	False	NA	-3	True	NA	NA	NA	6478817	6475592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
Isoform_116501_82	chr3	-	829	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	15	3767	15	-3767	multi-exon	FALSE	canonical	3	847	junction_1	36.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGACCATACTTATTC	NA	False	NA	-10	True	AATAAA	-28	NA	58433298	58431004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_58431290_58432503_58432580_58432830
Isoform_116511_300	chr3	-	2158	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	336	17	336	-17	multi-exon	FALSE	canonical	3	158	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGTCATGCTTCATT	NA	False	NA	-17	True	AATAAA	-13	NA	58599485	58582375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_58583865_58598816
Isoform_116514_60	chr3	-	2502	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	-8	17	-8	-17	multi-exon	FALSE	canonical	3	158	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGTCATGCTTCATT	NA	False	NA	-17	True	AATAAA	-13	NA	58599829	58582375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_58583865_58598816
Isoform_116515_90	chr3	-	1351	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	289	871	289	367	multi-exon	FALSE	canonical	3	158	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTCAGTACATCTT	NA	False	NA	-24	True	AATAAA	-15	NA	58599532	58583229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_58583865_58598816
Isoform_11652_8	chr11	-	2489	3	NIC	ENSMUSG00000085156.9	novel	611	4	NA	NA	-10	0	intron_retention	FALSE	canonical	3	436	junction_2	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478789	6475590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6475818_6476354_6478375_6478547
Isoform_116531_224	chr3	-	3544	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	7	2069	7	563	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACTTCTTGGTTTGGTT	NA	False	NA	NA	False	AATAAA	-39	NA	62414418	62377502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
Isoform_116535_119	chr3	-	5601	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	17	2	17	-2	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTTGTCATGTTTTA	NA	False	NA	-2	True	NA	NA	NA	62414408	62375435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
Isoform_116542_6	chr3	-	2416	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	88	-864	7	864	multi-exon	FALSE	canonical	3	41	junction_2	6.68487097856047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTGGTCTGCCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	63836805	63821240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
Isoform_116543_64	chr3	-	1546	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	88	6	7	-6	multi-exon	FALSE	canonical	3	41	junction_2	6.68487097856047	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATTCTTTCTGAGA	NA	False	NA	NA	False	AATAAA	-9	NA	63836805	63822110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
Isoform_116545_138	chr3	-	2961	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	185	4	83	-4	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTCAAAGCTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	63872004	63849754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
Isoform_116547_26	chr3	-	2996	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	150	4	48	-4	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTCAAAGCTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	63872039	63849754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
Isoform_116549_6	chr3	-	3182	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	-39	7	-39	-7	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAATCTCAAAGCTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	63872228	63849757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
Isoform_116556_1304	chr3	-	2916	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	33	8	33	-8	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	1304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTTGTTTTTCT	2749	False	NA	-9	True	ATTAAA	-12	NA	65300011	65287083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
Isoform_11656_162	chr11	-	2323	13	FSM	ENSMUSG00000000384.16	ENSMUST00000156969.8	2324	13	1	0	1	0	multi-exon	FALSE	canonical	3	74	junction_1	134.990406037697	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCACTGGCTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	6576042	6565597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_116566_19	chr3	-	2305	12	FSM	ENSMUSG00000027829.16	ENSMUST00000129002.8	2229	12	-79	3	8	-3	multi-exon	FALSE	canonical	3	27	junction_8	57.4382888393569	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865662	65853574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
Isoform_116567_28	chr3	-	2224	12	FSM	ENSMUSG00000027829.16	ENSMUST00000135719.8	1981	12	-203	-40	14	-4	multi-exon	FALSE	canonical	3	56	junction_8	51.1618724254952	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGTTTCAAATATCTT	NA	False	NA	NA	False	AATAAA	-19	NA	65865656	65853575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
Isoform_116569_83	chr3	-	2150	11	FSM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	14	5	14	-5	multi-exon	FALSE	canonical	3	90	junction_8	39.2388837761728	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	65865656	65853576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
Isoform_116572_6	chr3	-	2350	11	FSM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	70	-251	2	251	multi-exon	FALSE	canonical	3	90	junction_8	39.2388837761728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGCTACAGCCTAATGC	NA	False	NA	-28	True	ATTAAA	-27	NA	65865600	65853320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
Isoform_116573_6	chr3	-	2403	11	FSM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	14	-248	14	248	multi-exon	FALSE	canonical	3	90	junction_8	39.2388837761728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCAAAGCTACAGCCTAA	NA	False	NA	-31	True	ATTAAA	-24	NA	65865656	65853323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
Isoform_116574_4	chr3	-	5874	11	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	14	-3	intron_retention	FALSE	canonical	3	98	junction_8	37.3739213891184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865656	65853574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65862698_65864273_65864384_65864921_65864997_65865228
Isoform_116575_9	chr3	-	5819	11	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	2	-2	intron_retention	FALSE	canonical	3	98	junction_8	37.3739213891184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTCAAATATCTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	65865600	65853573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65862698_65864273_65864384_65864921_65864997_65865228
Isoform_116576_5	chr3	-	3677	12	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	2	-5	intron_retention	FALSE	canonical	2	8	junction_6	73.945143840016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	65865600	65853576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857648_65857900_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
Isoform_116579_6	chr3	-	3858	11	NIC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	2	-3	intron_retention	FALSE	canonical	3	56	junction_7	53.5545516272893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865600	65853574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
Isoform_11658_40	chr11	-	2397	13	NIC	ENSMUSG00000000384.16	novel	2324	13	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	184.937433113652	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGGGCCACTGGCTTT	NA	False	NA	-8	True	AATAAA	-16	NA	6576041	6565600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_116580_3	chr3	-	3790	10	FSM	ENSMUSG00000027829.16	ENSMUST00000142153.8	3414	10	-18	-358	0	0	multi-exon	FALSE	canonical	3	90	junction_7	40.7042934611675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865602	65853571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
Isoform_116584_74	chr3	-	1096	6	FSM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	16	0	16	0	multi-exon	FALSE	canonical	3	160	junction_4	5.56417109729742	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGTCTAATTGCATTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	67371243	67365330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
Isoform_116589_52	chr3	-	4066	20	FSM	ENSMUSG00000027778.16	ENSMUST00000169064.8	4064	20	12	-14	1	-12	multi-exon	FALSE	non_canonical	3	27	junction_10	3.97847393451879	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAATGAAGTCT	NA	False	NA	NA	False	AATAAA	-7	NA	68911891	68799843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
Isoform_116593_31	chr3	-	3131	3	NIC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	286	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTGGTGACATAGTTT	NA	False	NA	-11	True	AATAAA	-21	NA	68952078	68942625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_68945342_68951100_68951176_68951738
Isoform_116596_61	chr3	-	3093	3	FSM	ENSMUSG00000034317.15	ENSMUST00000136512.3	1553	3	4	-1544	4	-5	multi-exon	FALSE	canonical	3	60	junction_2	267.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTGGTGACATAGTTT	NA	False	NA	-11	True	AATAAA	-21	NA	68952044	68942625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_68945342_68951100_68951176_68951742
Isoform_116599_940	chr3	-	2925	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	10	4	10	-4	multi-exon	FALSE	canonical	3	361	junction_2	117	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGGTGACATAGTTTT	NA	False	NA	-10	True	AATAAA	-22	NA	68952078	68942624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_68945342_68951100_68951176_68951945
Isoform_116600_44	chr3	-	2941	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	-19	17	-19	-17	multi-exon	FALSE	canonical	3	361	junction_2	117	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAGTCTTAGAAAGTG	NA	False	NA	-23	True	AATAAA	-9	NA	68952107	68942637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_68945342_68951100_68951176_68951945
Isoform_116606_17	chr3	-	3287	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	293	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTGGTGACATAGTT	NA	False	NA	-12	True	AATAAA	-20	NA	68952087	68942626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_68945342_68951100_68951176_68951590
Isoform_116612_273	chr3	-	3709	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	16	1	16	-1	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTGTGTGGTGTGTGGA	NA	False	NA	-2	True	AATAAA	-32	NA	69034409	68979554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
Isoform_116613_157	chr3	-	3736	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	-11	1	10	-1	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTGTGTGGTGTGTGGA	NA	False	NA	-2	True	AATAAA	-32	NA	69034436	68979554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
Isoform_116625_33	chr3	-	2182	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	78	-232	78	232	multi-exon	FALSE	canonical	3	41	junction_2	5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAGAAAGGCCACCAT	NA	False	NA	-8	True	AATAAA	-10	NA	69506215	69481258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_69483294_69486658_69486725_69506134
Isoform_116626_5	chr3	-	2297	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	-38	-231	-38	231	multi-exon	FALSE	canonical	3	41	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAGAAAGGCCACCA	NA	False	NA	-9	True	AATAAA	-9	NA	69506331	69481259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_69483294_69486658_69486725_69506134
Isoform_116627_44	chr3	-	1961	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	51	16	51	-16	multi-exon	FALSE	canonical	3	41	junction_2	5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTTAAAAATGTAGTCA	NA	False	NA	-15	True	ATTAAA	-25	NA	69506242	69481506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_69483294_69486658_69486725_69506134
Isoform_116630_106	chr3	-	1869	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	58	0	13	0	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGCTATAAGACAATT	NA	False	NA	-11	True	ATTAAA	-13	NA	75464105	75423796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
Isoform_116631_404	chr3	-	1229	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	67	631	22	155	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTCTTTACTTGAAAA	NA	False	NA	-3	True	AATAAA	-17	NA	75464096	75424427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
Isoform_116634_182	chr3	-	1387	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	57	483	12	303	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTCCTTAATCACTT	NA	False	NA	-14	True	AATAAA	-17	NA	75464106	75424279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
Isoform_11664_50	chr11	-	2618	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	231	-1	combination_of_known_junctions	FALSE	canonical	3	75	junction_11	140.71599672936	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTATCTTCCCAGGC	NA	False	NA	-28	True	AATAAA	-18	NA	6575791	6566423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575383
Isoform_116640_19	chr3	-	927	3	FSM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	98	1	98	-1	multi-exon	FALSE	canonical	3	42	junction_1	94	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTCATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	75562940	75554753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_75555246_75556106_75556298_75562696
Isoform_116641_6	chr3	-	1030	3	FSM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	-5	1	-5	-1	multi-exon	FALSE	canonical	3	42	junction_1	94	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTCATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	75563043	75554753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_75555246_75556106_75556298_75562696
Isoform_116643_5	chr3	-	957	4	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	92.8906166771793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTCATGGTGTTTCT	NA	False	NA	0	True	NA	NA	NA	75563058	75554747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_75555246_75556106_75556298_75562696_75562869_75562962
Isoform_116644_22	chr3	-	1885	2	NIC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	1	-1	intron_retention	FALSE	canonical	3	230	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTCATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	75563037	75554753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_75556298_75562696
Isoform_116651_44	chr3	-	1784	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-20	2	intron_retention	FALSE	canonical	3	71	junction_2	79.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCATGGTCATGGTGTT	NA	False	NA	-3	True	NA	NA	NA	75563058	75554750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_75556298_75562696_75562869_75562993
Isoform_116656_23	chr3	-	1803	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-5	5	intron_retention	FALSE	canonical	3	25	junction_2	102.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTCATGGTGTTTCT	NA	False	NA	0	True	NA	NA	NA	75563043	75554747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_75556298_75562696_75562869_75562962
Isoform_116657_9	chr3	-	1282	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-27	-144	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	102.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCAGGTGGTCTCCATT	NA	False	NA	-6	True	AATAAA	-13	NA	75563065	75555290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_75556298_75562696_75562869_75562962
Isoform_116659_10	chr3	-	4341	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	7	203	-5	93	multi-exon	FALSE	canonical	3	22	junction_8	6.26950290427133	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTTTATTTTTCTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	75864249	75783692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
Isoform_116660_23	chr3	-	4245	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	7	299	-5	-3	multi-exon	FALSE	canonical	3	22	junction_8	6.26950290427133	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCTTTTAAAGCATATA	NA	False	NA	NA	False	AATAAA	-19	NA	75864249	75783788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
Isoform_116662_5	chr3	-	4523	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	29	-1	9	1	multi-exon	FALSE	canonical	3	22	junction_8	6.26950290427133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGAATATTTCTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	75864227	75783488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
Isoform_116666_15	chr3	-	7705	30	FSM	ENSMUSG00000062232.15	ENSMUST00000195708.2	6964	30	-730	-11	-730	-4	multi-exon	FALSE	canonical	3	31	junction_16	7.69637869042917	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTTTCATGAATTGTG	NA	False	NA	-10	True	AATAAA	-24	NA	79194554	78969826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79077045_79077064_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
Isoform_116668_3	chr3	-	7803	30	FSM	ENSMUSG00000062232.15	ENSMUST00000195708.2	6964	30	-827	-12	-827	-3	multi-exon	FALSE	canonical	3	31	junction_16	7.69637869042917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCATGAATTGTGC	NA	False	NA	-9	True	AATAAA	-25	NA	79194651	78969825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79077045_79077064_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
Isoform_116671_6	chr3	-	7762	29	NIC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-817	-1	combination_of_known_splicesites	FALSE	canonical	2	16	junction_23	9.02716987313119	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCCTTGTCTAAACTTT	NA	False	NA	-22	True	AATAAA	-12	NA	79194641	78969838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
Isoform_11668_881	chr11	-	2292	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	2	-4	2	4	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTCCCAGGCTCTGT	NA	False	NA	-23	True	AATAAA	-23	NA	6576041	6566418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_116684_32	chr3	-	7266	18	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-205	-284	combination_of_known_junctions	TRUE	canonical	3	39	junction_17	21.062273788996	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTATTCTCCTAGTG	NA	False	NA	-16	True	AATAAA	-14	NA	79439388	79363564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79438849
Isoform_116687_14	chr3	-	7103	18	FSM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	-82	278	-82	-278	multi-exon	FALSE	canonical	3	55	junction_17	18.4325197807334	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTCCTAGTGCTGCAT	8010	False	NA	-10	True	AATAAA	-20	NA	79475185	79363558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
Isoform_116688_36	chr3	-	6999	18	FSM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	16	284	16	-284	multi-exon	FALSE	canonical	3	55	junction_17	18.4325197807334	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTATTCTCCTAGTG	8108	False	NA	-16	True	AATAAA	-14	NA	79475087	79363564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
Isoform_11669_81	chr11	-	3114	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	1	-825	1	0	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCACTGGCTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	6576042	6565597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_116690_41	chr3	-	2364	13	FSM	ENSMUSG00000027809.15	ENSMUST00000029386.14	2377	13	-8	21	-8	-6	multi-exon	FALSE	canonical	3	73	junction_10	10.8790701195767	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACGAGAGCATTTATT	3576	False	NA	-21	True	AATAAA	-9	NA	79536178	79511115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
Isoform_116691_200	chr3	-	2226	13	FSM	ENSMUSG00000027809.15	ENSMUST00000029386.14	2377	13	130	21	6	-6	multi-exon	FALSE	canonical	3	73	junction_10	10.8790701195767	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACGAGAGCATTTATT	3714	False	NA	-21	True	AATAAA	-9	NA	79536040	79511115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
Isoform_116693_7	chr3	-	666	3	FSM	ENSMUSG00000027809.15	ENSMUST00000149511.2	3740	3	-14	3088	7	-3088	multi-exon	FALSE	canonical	3	110	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCTCAATTGTTAGGT	3715	False	NA	NA	False	AGTAAA	-21	NA	79536039	79529961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_79530275_79530847_79530986_79535824
Isoform_116695_41	chr3	-	2788	12	NIC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	-47	-7	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	3.82466981235684	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTATTTCTTTTCTTCT	NA	False	NA	NA	False	AATAAA	-10	NA	79750266	79719877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
Isoform_116699_24	chr3	-	2996	10	FSM	ENSMUSG00000028020.17	ENSMUST00000029654.15	3029	10	26	7	-20	-7	multi-exon	FALSE	canonical	3	21	junction_1	6.91214711777591	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATTTGCTCTTTAC	NA	False	NA	-18	True	ATTAAA	-15	NA	80820941	80750912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
Isoform_116700_5	chr3	-	3045	11	NNC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	-15	-1	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_2	12.2918672300021	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTCTTTACTGCTAT	NA	False	NA	-12	True	ATTAAA	-21	NA	80820936	80750906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_80752565_80757734_80757783_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
Isoform_116704_30	chr3	-	2967	2	ISM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	430	0	430	0	3prime_fragment	FALSE	canonical	3	36	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83748644	83743578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_83746097_83748195
Isoform_116706_81	chr3	-	2885	3	FSM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	129	0	129	0	multi-exon	FALSE	canonical	3	25	junction_2	5.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83748945	83743578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_83746097_83748195_83748444_83748826
Isoform_116707_12	chr3	-	4963	35	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	16.8193125114079	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	-22	True	AATAAA	-18	NA	83947443	83805511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_83805921_83806483_83806624_83807633_83807723_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
Isoform_116708_5	chr3	-	4824	34	NIC	ENSMUSG00000033767.15	novel	4774	34	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	18.2607880991439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	-22	True	AATAAA	-18	NA	83947487	83805511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_83805921_83806483_83806624_83807633_83807723_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
Isoform_116709_3	chr3	-	4984	35	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	1	1	combination_of_known_junctions	TRUE	canonical	2	5	junction_9	18.2667896888406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTGTTTATTTTTGC	NA	False	NA	-25	True	AATAAA	-15	NA	83947467	83805514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820693_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
Isoform_116710_65	chr3	-	4963	35	FSM	ENSMUSG00000033767.15	ENSMUST00000191758.6	5555	35	38	554	0	0	multi-exon	FALSE	canonical	3	49	junction_6	12.592082974362	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTATTTTTG	NA	False	NA	-26	True	AATAAA	-14	NA	83947444	83805515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
Isoform_116712_4	chr3	-	5101	36	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_32	22.5658220885172	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	-22	True	AATAAA	-18	NA	83947494	83805511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83876698_83876783_83938915_83938960_83946621_83946693_83947283
Isoform_116714_31	chr3	-	4808	34	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	14.3287519105165	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	-22	True	AATAAA	-18	NA	83947468	83805511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
Isoform_116717_80	chr3	-	831	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	44	0	44	0	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063049	83995239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
Isoform_116718_67	chr3	-	866	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	9	0	9	0	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063084	83995239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
Isoform_116719_11	chr3	-	798	7	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	79.9112354775945	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063091	83995239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_83995482_84000861_84000907_84012241_84012357_84041324_84041474_84045475_84045534_84049005_84049072_84062968
Isoform_116721_6	chr3	-	715	7	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	44	-1	combination_of_known_splicesites	FALSE	canonical	3	3	junction_2	82.0137183646736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTTCTCCTCTTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	84063049	83995240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_83995482_84000861_84000907_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
Isoform_116723_20	chr3	-	2975	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	21533	384	243	1	3prime_fragment	FALSE	canonical	3	56	junction_3	11.8801889247978	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	AAGAAA	-44	NA	84098612	84071027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819
Isoform_116727_6	chr3	-	6329	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	21460	-2897	170	0	3prime_fragment	FALSE	canonical	3	56	junction_3	11.8801889247978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGAGTGTTTATTCAAC	NA	False	NA	-20	True	AATAAA	-20	NA	84098685	84067746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819
Isoform_116728_18	chr3	-	6253	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	21537	-2898	247	0	3prime_fragment	TRUE	canonical	3	56	junction_3	11.8801889247978	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGTGTTTATTCAACA	NA	False	NA	-19	True	AATAAA	-21	NA	84098608	84067745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819
Isoform_11673_53	chr11	-	2235	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	154.867151813236	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTCCCAGGCTCTGT	NA	False	NA	-23	True	AATAAA	-23	NA	6576042	6566418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6576022
Isoform_116734_6	chr3	-	6472	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	21318	-2898	28	0	3prime_fragment	FALSE	canonical	3	56	junction_3	11.8801889247978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGTGTTTATTCAACA	NA	False	NA	-19	True	AATAAA	-21	NA	84098827	84067745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819
Isoform_116736_10	chr3	-	7076	12	FSM	ENSMUSG00000027993.17	ENSMUST00000054990.11	3816	12	21	-3281	21	0	multi-exon	FALSE	canonical	2	9	junction_11	26.7448921515557	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGAGTGTTTATTCAA	NA	False	NA	-21	True	AATAAA	-19	NA	84178077	84067747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84177940
Isoform_116737_3	chr3	-	3830	12	NIC	ENSMUSG00000027993.17	novel	7161	12	NA	NA	-22	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	28.1116428337071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAGAAAGAAAGAAAGA	8148	False	NA	NA	False	AAGAAA	-36	NA	84212726	84071035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84212547
Isoform_116738_6	chr3	-	2913	4	NNC	ENSMUSG00000027993.17	novel	664	3	NA	NA	308	1552	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.5407887880287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84098547	84083005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_84084537_84084556_84085107_84085381_84085486_84097819
Isoform_116739_12	chr3	-	4086	12	FSM	ENSMUSG00000041842.16	ENSMUST00000107689.7	5918	12	2	1830	2	7	multi-exon	FALSE	canonical	2	2	junction_2	2.63165724111457	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATGCCTCCCAGGAAT	NA	False	NA	NA	False	AATAAA	-27	NA	84387734	84351334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_84353838_84356056_84356222_84358676_84358795_84360823_84360895_84362093_84362202_84362294_84362366_84364301_84364403_84364492_84364579_84371578_84371682_84372728_84372791_84381446_84382085_84387674
Isoform_11674_27	chr11	-	2583	12	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	210	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	157.931567982115	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTCCCAGGCTCTGT	NA	False	NA	-23	True	AATAAA	-23	NA	6575812	6566418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575444
Isoform_116740_21	chr3	-	3025	9	FSM	ENSMUSG00000074513.10	ENSMUST00000143514.3	1343	9	-40	-1642	-40	-1	multi-exon	FALSE	canonical	3	20	junction_5	63.3733974156349	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTGCCCTGTCCTTA	NA	False	NA	-4	True	ATTAAA	-15	NA	84489972	84403400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240_84455343_84489720
Isoform_116743_175	chr3	-	2951	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-153	1	-62	-1	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTGCCCTGTCCTTA	NA	False	NA	-4	True	ATTAAA	-15	NA	84489994	84403400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
Isoform_116749_14	chr3	-	3011	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-213	1	-122	-1	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTGCCCTGTCCTTA	NA	False	NA	-4	True	ATTAAA	-15	NA	84490054	84403400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
Isoform_116750_8	chr3	-	2838	7	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	-52	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	62.7986199423735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCAGTTGCCCTGTCCTT	NA	False	NA	-5	True	ATTAAA	-14	NA	84489984	84403401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84489720
Isoform_116751_4	chr3	-	2831	7	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	65.3667006629182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489986	84403399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84441893_84442003_84455240_84455343_84489720
Isoform_116754_3	chr3	-	2581	2	FSM	ENSMUSG00000085527.2	ENSMUST00000128872.2	375	2	-71	-2135	20	1	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85481232	85463351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_85465826_85481125
Isoform_116765_4217	chr3	-	864	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	108	5	108	-5	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	4217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049901	86045251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
Isoform_116766_3580	chr3	-	899	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	73	5	73	-5	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	3580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049936	86045251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
Isoform_116781_164	chr3	-	3530	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	-41	-3	-2	-3	multi-exon	FALSE	canonical	3	155	junction_11	36.9688156874593	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGGGGTGGGTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	86827683	86693462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_116782_124	chr3	-	4075	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	-586	-3	-69	-3	multi-exon	FALSE	canonical	3	155	junction_11	36.9688156874593	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGGGGTGGGTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	86828228	86693462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_11679_94	chr11	-	2370	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	147.44311131545	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTCCCAGGCTCTGT	NA	False	NA	-23	True	AATAAA	-23	NA	6576041	6566418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_116791_83	chr3	-	3533	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	476	3	-2	-3	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGGGGTGGGTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	86827683	86693462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_116792_44	chr3	-	4057	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	-48	3	-48	-3	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGGGGTGGGTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	86828207	86693462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_116797_13	chr3	-	3456	16	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	61.1551760324141	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGGGGTGGGTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	86827683	86693462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_86694720_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_116807_9	chr3	-	2065	12	FSM	ENSMUSG00000028078.15	ENSMUST00000194452.2	2066	12	0	1	0	-1	multi-exon	FALSE	canonical	3	155	junction_7	39.3729781062936	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAACACACCTTTCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	86827681	86706228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_116811_22	chr3	-	2590	3	FSM	ENSMUSG00000028076.13	ENSMUST00000107620.3	1475	3	-1124	9	-117	-9	multi-exon	FALSE	canonical	3	84	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906378	86903149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86903909_86903996_86904094_86904644
Isoform_116812_3	chr3	-	2144	4	ISM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	361	9	-126	-9	intron_retention	FALSE	canonical	3	63	junction_3	10.6770782520313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906387	86903149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378
Isoform_116813_21	chr3	-	1852	5	ISM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	371	9	-116	-9	3prime_fragment	FALSE	canonical	3	57	junction_4	12.9687123493429	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906377	86903149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939
Isoform_116815_18	chr3	-	1855	6	FSM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	82	9	-18	-9	multi-exon	FALSE	canonical	3	57	junction_4	13.2	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906666	86903149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939_86906213_86906498
Isoform_116816_30	chr3	-	1788	6	FSM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	149	9	17	-9	multi-exon	FALSE	canonical	3	57	junction_4	13.2	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906599	86903149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939_86906213_86906498
Isoform_116818_9	chr3	-	2562	4	NIC	ENSMUSG00000028076.13	novel	1946	6	NA	NA	12	-9	intron_retention	FALSE	canonical	3	57	junction_3	13.490737563232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906636	86903149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_86903909_86903996_86904094_86904644_86906213_86906498
Isoform_116819_18	chr3	-	2524	4	NIC	ENSMUSG00000028076.13	novel	1946	6	NA	NA	18	-9	intron_retention	FALSE	canonical	3	57	junction_3	13.490737563232	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906598	86903149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_86903909_86903996_86904094_86904644_86906213_86906498
Isoform_116820_11	chr3	-	3527	16	FSM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	23	3686	23	2349	multi-exon	FALSE	canonical	3	15	junction_15	12.9144191593049	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGCTGTAGGGGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	87081984	86989585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
Isoform_116825_6	chr3	-	7225	16	FSM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	4	7	4	1	multi-exon	FALSE	canonical	3	15	junction_15	12.9144191593049	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTACCATGTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	87082003	86985906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
Isoform_116826_22	chr3	-	3524	16	FSM	ENSMUSG00000041734.16	ENSMUST00000107618.9	7278	16	76	3678	29	2349	multi-exon	FALSE	canonical	3	30	junction_15	10.3850319637875	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGCTGTAGGGGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	87081978	86989585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
Isoform_116829_6	chr3	-	3038	16	FSM	ENSMUSG00000041734.16	ENSMUST00000107618.9	7278	16	30	4210	-17	1817	multi-exon	FALSE	canonical	3	30	junction_15	10.3850319637875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTGCTCCTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	87082024	86990117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
Isoform_116834_3	chr3	-	3196	15	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	37618	2349	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	16.1227751194086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGCTGTAGGGGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	87044239	86989585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87044145
Isoform_116835_3	chr3	-	1697	9	NIC	ENSMUSG00000028072.7	novel	2588	17	NA	NA	11162	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	2.29128784747792	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCTCTTGGCCATTC	NA	False	NA	NA	False	NA	NA	NA	87691307	87685550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_87685907_87686942_87687102_87687377_87687619_87688737_87688911_87689047_87689179_87689457_87689605_87690031_87690135_87690380_87690437_87690976
Isoform_116839_1000	chr3	-	2060	7	FSM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	28	11	28	-11	multi-exon	FALSE	canonical	3	312	junction_5	35.6401770789964	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGCCTACAAGGTGTC	2327	False	NA	-10	True	AATAAA	-16	NA	87792887	87766220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
Isoform_116844_12	chr3	-	2158	7	FSM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	-70	11	-70	-11	multi-exon	FALSE	canonical	3	312	junction_5	35.6401770789964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGCCTACAAGGTGTC	2229	False	NA	-10	True	AATAAA	-16	NA	87792985	87766220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
Isoform_116851_5	chr3	-	3619	7	NIC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	13	junction_2	38.2433727011041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATGTAATTTTTATT	9423	False	NA	-24	True	TATAAA	-25	NA	87837471	87830966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_87831220_87831650_87831836_87832198_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230
Isoform_116852_26	chr3	-	1737	8	FSM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	0	755	0	-1	multi-exon	FALSE	canonical	3	36	junction_2	29.6922995583236	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATGTAATTTTTATT	9443	False	NA	-24	True	TATAAA	-25	NA	87837451	87830966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
Isoform_116854_4	chr3	-	2791	8	FSM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	-6	-293	-6	-11	multi-exon	FALSE	canonical	3	36	junction_2	29.6922995583236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAATTAACAGAC	9437	False	NA	-13	True	NA	NA	NA	87837457	87829918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
Isoform_116857_5	chr3	-	1740	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	32.1666578548506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9444	False	NA	-25	True	TATAAA	-24	NA	87837450	87830967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
Isoform_116858_4	chr3	-	2089	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	32.1666578548506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGATCCCCATGGCCTC	9443	False	NA	NA	False	AATAAA	-21	NA	87837451	87830619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
Isoform_116860_7	chr3	-	4157	5	ISM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-46	1061	-29	1	intron_retention	FALSE	canonical	3	80	junction_4	17.8115131305569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACCATGTAATTTTTA	9414	False	NA	-26	True	TATAAA	-23	NA	87837480	87830968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869
Isoform_116861_7	chr3	-	3920	6	ISM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-16	1060	1	-2	intron_retention	FALSE	canonical	3	33	junction_5	33.4388995034227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9444	False	NA	-25	True	TATAAA	-24	NA	87837450	87830967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230
Isoform_116862_7	chr3	-	2141	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-43	1059	-26	-1	multi-exon	FALSE	canonical	3	33	junction_5	31.4046174948844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATGTAATTTTTATT	9417	False	NA	-24	True	TATAAA	-25	NA	87837477	87830966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
Isoform_116865_24	chr3	-	2154	7	FSM	ENSMUSG00000004896.17	ENSMUST00000159091.9	3197	7	-16	1059	1	-1	multi-exon	FALSE	canonical	3	63	junction_5	23.5849528301415	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATGTAATTTTTATT	9444	False	NA	-24	True	TATAAA	-25	NA	87837450	87830966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
Isoform_116869_1394	chr3	-	926	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	-20	2	-20	-2	multi-exon	TRUE	canonical	3	839	junction_3	34.2963554915096	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTCTTCTGGCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	87965822	87963828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
Isoform_116871_18	chr3	-	819	5	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-27	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	382.924519324631	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTCTTCTGGCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	87965829	87963828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_87964084_87964292_87964441_87965227_87965339_87965436_87965546_87965633
Isoform_116878_8	chr3	-	1270	8	ISM	ENSMUSG00000104445.2	ENSMUST00000171887.4	1937	10	6860	251	6860	-251	3prime_fragment	TRUE	canonical	2	4	junction_4	1.39970842444753	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTGCGCCTCTCC	6158	False	NA	NA	False	GATAAA	-23	NA	88155156	88150431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_88150756_88150899_88150974_88151831_88151954_88152439_88152574_88152742_88152881_88153121_88153289_88154738_88154887_88154993
Isoform_116879_40	chr3	-	456	4	FSM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	126	2	23	1	multi-exon	TRUE	canonical	3	152	junction_3	20.138409955991	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGACATGGGTCTGAGT	NA	False	NA	NA	False	CATAAA	-12	NA	88204180	88190065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88190292_88194404_88194525_88202697_88202758_88204130
Isoform_116880_3	chr3	-	545	4	FSM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	37	2	37	1	multi-exon	FALSE	canonical	3	152	junction_3	20.138409955991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGACATGGGTCTGAGT	NA	False	NA	NA	False	CATAAA	-12	NA	88204269	88190065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88190292_88194404_88194525_88202697_88202758_88204130
Isoform_116881_3	chr3	-	985	3	ISM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	148	3564	-13	-3561	5prime_fragment	FALSE	canonical	3	152	junction_2	22.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACACATAAAATGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88204158	88193627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_88194525_88202697_88202758_88204130
Isoform_116882_3	chr3	-	4404	3	ISM	ENSMUSG00000001420.14	ENSMUST00000107552.2	2063	4	-1738	-3	-44	2	intron_retention	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGCTCGTTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	88243499	88236350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_88237240_88239746_88239961_88240198
Isoform_116883_3	chr3	-	2361	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	44	1	-6	-1	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATAAGAGAGACTG	NA	False	NA	NA	False	NA	NA	NA	88241767	88235962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
Isoform_116884_30	chr3	-	2005	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	12	389	12	2	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGCTCGTTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	88241799	88236350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
Isoform_116887_3	chr3	-	1987	4	NNC	ENSMUSG00000001420.14	novel	2053	4	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	8.48528137423857	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGCTCGTTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	88241604	88236350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_88237240_88239746_88239961_88240198_88240990_88241511
Isoform_116890_9	chr3	-	3596	5	NNC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	18.3166590840142	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	7128	False	NA	NA	False	AATAAA	-13	NA	88280050	88275928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88277896_88277928
Isoform_116891_31	chr3	-	2052	6	FSM	ENSMUSG00000074489.10	ENSMUST00000107542.2	2051	6	0	-1	0	1	multi-exon	TRUE	canonical	3	20	junction_5	10.571660229122	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGGCTGGAGTCTGT	7128	False	NA	NA	False	AATAAA	-14	NA	88280050	88275927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88277434_88278787_88279845
Isoform_116892_95	chr3	-	700	5	NIC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	35.14612354158	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGGCTGGAGTCTGT	7128	False	NA	NA	False	AATAAA	-14	NA	88280050	88275927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88279845
Isoform_116893_19	chr3	-	687	5	NNC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	6.26498204307083	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGGCTGGAGTCTGT	7128	False	NA	NA	False	AATAAA	-14	NA	88280050	88275927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88279858
Isoform_116894_3	chr3	-	2561	5	NIC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	9	0	intron_retention	FALSE	canonical	3	20	junction_4	10.0249688278817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	7137	False	NA	NA	False	AATAAA	-13	NA	88280041	88275928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88278787_88279845
Isoform_116895_3	chr3	-	3836	3	FSM	ENSMUSG00000074489.10	ENSMUST00000140259.2	816	3	-3021	1	0	1	multi-exon	FALSE	canonical	3	35	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGGCTGGAGTCTGT	7128	False	NA	NA	False	AATAAA	-14	NA	88280050	88275927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88276460_88276602_88276636_88276779
Isoform_116898_447	chr3	-	995	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	15	-3	-8	3	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGAGGAGGTTTCCT	NA	False	NA	-3	True	AATAAA	-19	NA	88317623	88301446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
Isoform_116899_216	chr3	-	1075	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	-65	-3	-65	3	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGAGGAGGTTTCCT	NA	False	NA	-3	True	AATAAA	-19	NA	88317703	88301446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
Isoform_11690_356	chr11	-	2439	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	-26	8	0	-8	multi-exon	FALSE	canonical	3	177	junction_4	11.7340317027013	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGCCCTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	7163923	7156093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
Isoform_116901_17	chr3	-	787	3	FSM	ENSMUSG00000028066.16	ENSMUST00000193338.6	795	3	10	-2	-8	2	multi-exon	FALSE	canonical	0	0	junction_1	8.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGTGAGGAGGTTTCC	NA	False	NA	-4	True	AATAAA	-18	NA	88317623	88301447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88301878_88303211_88303408_88317462
Isoform_116905_152	chr3	-	3542	4	FSM	ENSMUSG00000050144.14	ENSMUST00000057935.9	3577	4	37	-2	5	1	multi-exon	FALSE	canonical	3	53	junction_3	3.85861230093008	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCTTTTGGGTTTT	4103	False	NA	-2	True	ATTAAA	-20	NA	88332409	88317803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332034
Isoform_116909_32	chr3	-	3514	4	FSM	ENSMUSG00000050144.14	ENSMUST00000195657.6	3504	4	-8	-2	-8	1	multi-exon	FALSE	canonical	3	7	junction_3	25.4689353265241	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCTTTTGGGTTTT	4085	False	NA	-2	True	ATTAAA	-20	NA	88332427	88317803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332080
Isoform_116911_34	chr3	-	3424	4	FSM	ENSMUSG00000050144.14	ENSMUST00000193433.6	3429	4	6	-1	5	1	multi-exon	FALSE	canonical	0	0	junction_3	28.7672653471886	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCTTTTGGGTTTT	4103	False	NA	-2	True	ATTAAA	-20	NA	88332409	88317803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332152
Isoform_116913_31	chr3	-	1970	5	FSM	ENSMUSG00000028064.18	ENSMUST00000156108.8	2108	5	135	3	135	-3	multi-exon	FALSE	canonical	3	30	junction_4	4.71036092035419	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCTTATGGCGTGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	88348311	88343271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004
Isoform_116916_9	chr3	-	2207	7	FSM	ENSMUSG00000028064.18	ENSMUST00000149145.2	2357	7	148	2	148	-2	multi-exon	TRUE	canonical	2	6	junction_6	14.3614066163451	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTATGGCGTGCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	88357197	88343270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986
Isoform_116917_11	chr3	-	3221	15	FSM	ENSMUSG00000028064.18	ENSMUST00000029700.12	3205	15	-22	6	-22	-3	multi-exon	FALSE	canonical	0	0	junction_13	15.169787374238	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCTTATGGCGTGCT	9674	False	NA	NA	False	ATTAAA	-17	NA	88363068	88343271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358758_88358994_88359094_88359326_88359390_88360277_88360439_88361985_88362154_88362854
Isoform_116919_140	chr3	-	3126	12	FSM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	30	0	2	0	multi-exon	FALSE	canonical	3	31	junction_1	44.0904404848575	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTGTGGTGTCTCTTTG	NA	False	NA	-3	True	AATACA	-19	NA	88410612	88388454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
Isoform_11692_65	chr11	-	2502	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	-89	8	-63	-8	multi-exon	FALSE	canonical	3	177	junction_4	11.7340317027013	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGCCCTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	7163986	7156093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
Isoform_116926_642	chr3	-	2021	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	22.6377811589932	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	NA	False	NA	-1	True	ATTAAA	-19	NA	88410614	88390511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
Isoform_116928_12	chr3	-	2253	12	NIC	ENSMUSG00000028063.16	novel	2021	10	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	55.0757554916427	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCTGCCCTGGCCTTT	7849	False	NA	-3	True	ATTAAA	-17	NA	88417267	88390513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054_88410694_88411475_88411551_88417187
Isoform_11693_17	chr11	-	2559	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	-146	8	-120	-8	multi-exon	FALSE	canonical	3	177	junction_4	11.7340317027013	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGCCCTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	7164043	7156093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
Isoform_116930_45	chr3	-	633	4	FSM	ENSMUSG00000028062.16	ENSMUST00000119002.2	568	4	-65	0	-31	0	multi-exon	FALSE	canonical	3	112	junction_3	1254.14043161929	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCACCTGCTTT	1077	False	NA	-7	True	AATAAA	-13	NA	88460231	88457126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460036
Isoform_116932_1152	chr3	-	567	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	100	1	-31	0	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCACCTGCTTT	1077	False	NA	-7	True	AATAAA	-13	NA	88460231	88457126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
Isoform_116933_30	chr3	-	612	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	56	0	56	0	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1033	False	NA	-6	True	AATAAA	-14	NA	88460275	88457125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
Isoform_116938_18	chr3	-	412	2	FSM	ENSMUSG00000028062.16	ENSMUST00000145172.2	567	2	146	9	-35	-9	multi-exon	FALSE	canonical	3	2467	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAAGTGAGAGTACG	1073	False	NA	NA	False	AATAAA	-13	NA	88460235	88459545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88459825_88460102
Isoform_116941_8	chr3	-	2673	4	FSM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	31	1863	31	908	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88679875	88653870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88655318_88656085_88656210_88669032_88669857_88679597
Isoform_116946_16	chr3	-	1768	14	ISM	ENSMUSG00000068922.15	ENSMUST00000107494.8	2093	15	7	4536	7	1	5prime_fragment	FALSE	canonical	3	20	junction_12	192.717010546153	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGTGTAGGGACCTG	NA	False	NA	-35	True	AATAAA	-16	NA	88821231	88816949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820231_88820873_88821010_88821099
Isoform_116950_93	chr3	-	1797	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	50	28	-18	1	multi-exon	FALSE	canonical	3	676	junction_13	37.3331396162909	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGTGTAGGGACCTG	NA	False	NA	-35	True	AATAAA	-16	NA	88821256	88816949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
Isoform_116951_1285	chr3	-	1747	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	100	28	4	1	multi-exon	FALSE	canonical	3	676	junction_13	37.3331396162909	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGTGTAGGGACCTG	NA	False	NA	-35	True	AATAAA	-16	NA	88821206	88816949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
Isoform_116958_38	chr3	-	2077	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	-149	2832	-149	0	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857870	88830941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_116960_635	chr3	-	1465	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	463	2832	0	0	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_116962_125	chr3	-	1694	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	233	2833	90	-1	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857488	88830942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_116963_89	chr3	-	1723	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	205	2832	62	0	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857516	88830941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_116970_14	chr3	-	1470	13	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	67	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	242.200444994545	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857511	88830941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857422
Isoform_116977_24	chr3	-	1305	12	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	248.823878102664	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857258	88830942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_11698_21	chr11	-	7737	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	159	1	159	-1	multi-exon	TRUE	canonical	3	18	junction_30	12.8998277335612	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGCATTTTTTTAAGTC	5234	False	NA	NA	False	AATAAA	-23	NA	8574728	8381652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
Isoform_116983_17	chr3	-	1376	12	FSM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	-1	0	-1	0	multi-exon	FALSE	canonical	3	33	junction_2	248.490151458566	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857259	88830941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_11699_6	chr11	-	5655	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	126	2116	126	-2116	multi-exon	FALSE	canonical	3	18	junction_30	12.8998277335612	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTATAACCGCTTGC	5201	False	NA	NA	False	AATATA	-17	NA	8574761	8383767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
Isoform_116990_5	chr3	-	2082	8	ISM	ENSMUSG00000041263.15	ENSMUST00000166687.6	1922	9	44	-1	-26	1	intron_retention	TRUE	canonical	3	31	junction_6	3.23879544250132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATGTGTCCCTGTGG	NA	False	NA	-4	True	AATAAA	-14	NA	88997308	88991286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975
Isoform_116992_11	chr3	-	1870	9	FSM	ENSMUSG00000041263.15	ENSMUST00000166687.6	1922	9	52	0	-18	0	multi-exon	FALSE	canonical	2	2	junction_8	11.2354072022335	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	False	NA	-5	True	AATAAA	-13	NA	88997300	88991287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997277
Isoform_116993_16	chr3	-	2146	9	ISM	ENSMUSG00000041263.15	ENSMUST00000090929.12	3706	11	2497	-1	-748	1	3prime_fragment	FALSE	canonical	2	6	junction_8	9.96791728496981	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATGTGTCCCTGTGG	NA	False	NA	-4	True	AATAAA	-14	NA	88998100	88991286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997802
Isoform_116994_4	chr3	-	1843	9	ISM	ENSMUSG00000041263.15	ENSMUST00000090929.12	3706	11	2445	354	-800	-354	3prime_fragment	FALSE	canonical	2	6	junction_8	9.96791728496981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCACCTGTGAGGTGAAA	NA	False	NA	NA	False	AATAAA	-19	NA	88998152	88991641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997802
Isoform_116995_5	chr3	-	3333	10	FSM	ENSMUSG00000041263.15	ENSMUST00000052539.13	3316	10	-16	-1	-16	1	multi-exon	FALSE	canonical	0	0	junction_9	13.9292746170798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATGTGTCCCTGTGG	NA	False	NA	-4	True	AATAAA	-14	NA	89000634	88991286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88998444_88999869_89000573
Isoform_117_1358	ERCC-00108	+	1003	1	FSM	ERCC-00108A	DQ668365	1005	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00108_+_0_1000
Isoform_1170_247	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	1	-1	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTACTTGGGCACCTT	NA	False	NA	NA	False	NA	NA	NA	1819	1543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_-_1500_1800
Isoform_117006_53	chr3	-	2089	10	ISM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	18	0	-18	0	intron_retention	FALSE	canonical	3	144	junction_9	697.876461528511	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009177	89000894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227
Isoform_117008_315	chr3	-	1378	11	FSM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	4	0	4	0	multi-exon	FALSE	canonical	3	68	junction_10	899.425283166979	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009191	89000894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227_89008444_89009168
Isoform_117011_2791	chr3	-	1168	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	69	0	1	0	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	2791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009197	89000894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
Isoform_117012_996	chr3	-	1205	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	32	0	32	0	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009234	89000894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
Isoform_117017_8	chr3	-	1544	3	NNC	ENSMUSG00000028051.11	novel	4002	8	NA	NA	13	-395	intron_retention	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGCTCTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	89067490	89059182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_89059313_89059352_89060368_89067091
Isoform_117019_13	chr3	-	1083	8	FSM	ENSMUSG00000064068.16	ENSMUST00000173477.8	892	8	-59	-132	8	0	multi-exon	FALSE	canonical	1	38	junction_5	268.396143407312	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGAATCCCTTCTTTCT	NA	False	NA	-16	True	AATAAA	-21	NA	89121206	89116387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117981_89119989_89120070_89120183_89120254_89121119
Isoform_11702_15	chr11	-	7530	31	FSM	ENSMUSG00000020422.15	ENSMUST00000020695.13	7483	31	-48	1	-48	-1	multi-exon	FALSE	canonical	3	26	junction_30	11.9341247409826	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGCATTTTTTTAAGTC	9613	False	NA	NA	False	AATAAA	-23	NA	8614583	8381652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
Isoform_117020_778	chr3	-	1087	8	FSM	ENSMUSG00000064068.16	ENSMUST00000239452.2	1522	8	435	0	7	0	multi-exon	FALSE	canonical	3	739	junction_1	39.053077434984	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGAATCCCTTCTTTCT	NA	False	NA	-16	True	AATAAA	-21	NA	89121207	89116387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
Isoform_117023_28	chr3	-	1543	7	NIC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	739	junction_1	41.4286535302963	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAAAGAATCCCTTCTTT	NA	False	NA	-18	True	AATAAA	-19	NA	89121218	89116389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89116729_89116811_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
Isoform_117025_13	chr3	-	1348	4	FSM	ENSMUSG00000027953.14	ENSMUST00000144777.8	1332	4	-14	-2	-13	0	multi-exon	FALSE	canonical	3	133	junction_3	10.1434160364686	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177846	89175552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133
Isoform_117027_94	chr3	-	969	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	53	0	6	0	multi-exon	FALSE	canonical	3	127	junction_5	11.5481600266016	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177824	89175552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
Isoform_117028_4	chr3	-	907	6	NIC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	58.5388759714431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGAGTGATGTGTTCTT	NA	False	NA	-30	True	AATAAA	-18	NA	89177846	89175551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177777
Isoform_117029_3	chr3	-	902	6	NIC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	58.1425833619388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177887	89175552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177822
Isoform_117030_14	chr3	-	1109	5	FSM	ENSMUSG00000027953.14	ENSMUST00000132445.8	1086	5	-24	1	-21	-1	multi-exon	FALSE	canonical	3	127	junction_4	12.4373429638327	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGAGTGATGTGTTC	NA	False	NA	-32	True	AATAAA	-16	NA	89177854	89175553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177447_89177692
Isoform_117031_3	chr3	-	1061	6	NIC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	57.1195238075389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177831	89175554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89175906_89175979_89176100_89176356_89176606_89177133_89177258_89177368_89177447_89177692
Isoform_117032_5	chr3	-	1194	5	FSM	ENSMUSG00000027953.14	ENSMUST00000133575.8	1176	5	-19	1	-19	-1	multi-exon	FALSE	canonical	3	6	junction_3	61.3697808371514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGAGTGATGTGTTC	NA	False	NA	-32	True	AATAAA	-16	NA	89177852	89175553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89175906_89175979_89176100_89176356_89176606_89177133_89177447_89177692
Isoform_117033_29	chr3	-	1498	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	-20	2	-20	1	multi-exon	FALSE	canonical	3	14	junction_2	2.77263412660235	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCCCACCA	1646	False	NA	NA	False	AATAAA	-19	NA	89186972	89179041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
Isoform_117034_60	chr3	-	2260	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	99	4	21	-4	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAAATGTCTCTTAA	9288	False	NA	NA	False	NA	NA	NA	89230173	89221209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
Isoform_117035_189	chr3	-	1736	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	39	588	39	-588	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACCTGAGTGTGTGT	9228	False	NA	NA	False	AATAAA	-9	NA	89230233	89221793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
Isoform_117037_16	chr3	-	2329	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	29	5	29	-5	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAATGTCTCTTA	9218	False	NA	NA	False	NA	NA	NA	89230243	89221210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
Isoform_117038_5	chr3	-	2227	4	FSM	ENSMUSG00000028039.12	ENSMUST00000200436.2	742	4	-25	-1460	-25	-5	multi-exon	FALSE	canonical	3	11	junction_1	91.0103779186137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAATGTCTCTTA	9242	False	NA	NA	False	NA	NA	NA	89230219	89221210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89222875_89223376_89223443_89223769_89224060_89230012
Isoform_117039_8	chr3	-	1653	4	FSM	ENSMUSG00000028039.12	ENSMUST00000200436.2	742	4	-35	-876	-35	-589	multi-exon	FALSE	canonical	3	11	junction_1	91.0103779186137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATACCTGAGTGTGTG	9232	False	NA	NA	False	AATAAA	-8	NA	89230229	89221794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89222875_89223376_89223443_89223769_89224060_89230012
Isoform_117040_53	chr3	-	1249	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	1	349	1	-349	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCTCACACCTGTA	1613	False	NA	-11	True	AATAAA	-19	NA	89245334	89241045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
Isoform_117041_14	chr3	-	1541	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	54	4	54	-4	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCACCCTTCTTTGTGT	1666	False	NA	NA	False	AATAAA	-10	NA	89245281	89240700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
Isoform_117043_12	chr3	-	1284	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	-34	349	-34	-349	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCTCACACCTGTA	1578	False	NA	-11	True	AATAAA	-19	NA	89245369	89241045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
Isoform_117046_3	chr3	-	1635	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	-32	-4	-32	4	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTTTGTGTGGCCCTCC	1580	False	NA	NA	False	AATAAA	-18	NA	89245367	89240692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
Isoform_117047_3	chr3	-	2900	23	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-3	1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	39.1648349609782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257292	89246953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89247261_89247361_89247430_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_117048_3	chr3	-	2969	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	45.3643650879709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTGCTCCTGGAAGC	NA	False	NA	-16	True	AATAAA	-15	NA	89257294	89246951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_89247261_89247361_89247430_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_117049_6	chr3	-	3095	24	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	41.8793387843365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTGCTCCTGGAAGC	NA	False	NA	-16	True	AATAAA	-15	NA	89257291	89246951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_11705_3	chr11	-	5112	6	ISM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	34	7	3	-7	intron_retention	FALSE	canonical	3	104	junction_5	41.0881978188384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTACTTGGAATTCATT	NA	False	NA	85	True	AATAAA	-14	NA	8961157	8943143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240
Isoform_117050_72	chr3	-	2984	23	FSM	ENSMUSG00000028041.18	ENSMUST00000029676.12	2975	23	-9	0	-9	0	multi-exon	TRUE	canonical	3	47	junction_3	32.1478056009843	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257312	89246946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_117051_3	chr3	-	3055	22	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	0	-1	intron_retention	FALSE	canonical	3	47	junction_3	32.7924829614275	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGTGTCTGCTCCTGG	NA	False	NA	-20	True	AATAAA	-11	NA	89257303	89246955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_117052_14	chr3	-	3046	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	39.5830542254913	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257316	89246950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_117053_37	chr3	-	2884	22	FSM	ENSMUSG00000028041.18	ENSMUST00000107448.9	2893	22	4	5	-3	-1	multi-exon	FALSE	canonical	3	22	junction_3	33.3036602620203	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTGCTCCTGGAAGC	NA	False	NA	-16	True	AATAAA	-15	NA	89257292	89246951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_117055_36	chr3	-	2815	21	FSM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	-13	-3	1	-1	multi-exon	FALSE	canonical	3	16	junction_2	31.553882486946	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTGCTCCTGGAAGC	NA	False	NA	-16	True	AATAAA	-15	NA	89257295	89246951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_117057_15	chr3	-	1054	6	FSM	ENSMUSG00000028041.18	ENSMUST00000155295.8	1034	6	-19	-1	3	1	multi-exon	FALSE	canonical	3	122	junction_5	16.0549057923116	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGGTTTTGATTTGCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	89257286	89253833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_117058_3	chr3	-	854	5	NIC	ENSMUSG00000028041.18	novel	1034	6	NA	NA	-2	-118	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	60.4333310351167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGCCTGGAACACTGT	NA	False	NA	NA	False	NA	NA	NA	89257284	89253952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89254374_89254458_89254536_89255175_89255253_89255824_89255935_89257115
Isoform_117059_6	chr3	-	3603	2	ISM	ENSMUSG00000028042.16	ENSMUST00000107433.8	3650	3	5589	5	5589	-5	3prime_fragment	FALSE	canonical	3	40	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGTGTCCACTTTT	NA	False	NA	-14	True	AAGAAA	-18	NA	89288907	89284955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_89287302_89287650
Isoform_11706_16	chr11	-	5033	7	FSM	ENSMUSG00000020413.12	ENSMUST00000152890.8	2792	7	-22	-2219	10	0	multi-exon	FALSE	canonical	3	104	junction_5	37.7079419869195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	92	True	AATAAA	-21	NA	8961150	8943136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496
Isoform_117062_3	chr3	-	3661	3	FSM	ENSMUSG00000028042.16	ENSMUST00000107433.8	3650	3	-16	5	-16	-5	multi-exon	FALSE	canonical	0	0	junction_2	20	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGTGTCCACTTTT	NA	False	NA	-14	True	AAGAAA	-18	NA	89294512	89284955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89287302_89287650_89288823_89294369
Isoform_117064_8	chr3	-	3714	3	FSM	ENSMUSG00000028042.16	ENSMUST00000029677.9	3851	3	137	0	117	0	multi-exon	FALSE	canonical	3	27	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCCACTTTTGGTTC	NA	False	NA	-9	True	AAGAAA	-23	NA	89300532	89284950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89287302_89287650_89288823_89300341
Isoform_117066_22	chr3	-	3815	4	NIC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	12.2836838484589	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	-11	True	AAGAAA	-21	NA	89300976	89284952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300783
Isoform_117070_15	chr3	-	3687	4	NIC	ENSMUSG00000028042.16	novel	544	3	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	13.5728487143349	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	-11	True	AAGAAA	-21	NA	89300985	89284952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300920
Isoform_117072_3	chr3	-	3645	3	NNC	ENSMUSG00000028042.16	novel	3650	3	NA	NA	-196	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGTGTCCACTTTT	NA	False	NA	-14	True	AAGAAA	-18	NA	89299572	89284955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_89287302_89287650_89288823_89299445
Isoform_117073_3	chr3	-	3551	3	NNC	ENSMUSG00000028042.16	novel	3650	3	NA	NA	4896	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTGTCCACTTTTG	NA	False	NA	-13	True	AAGAAA	-19	NA	89289600	89284954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_89287302_89287650_89288823_89289568
Isoform_117078_42	chr3	-	2000	8	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	2	-415	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	114.072300739129	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3746	False	NA	-15	True	AGTAAA	-18	NA	89319168	89310388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89318867
Isoform_117081_99	chr3	-	1800	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	23	415	17	-415	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3761	False	NA	-15	True	AGTAAA	-18	NA	89319153	89310388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
Isoform_117082_12	chr3	-	2933	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	0	-695	0	-3	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGGAATGAGGGCATGT	3738	False	NA	-3	True	AATAAA	-32	NA	89319176	89309278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
Isoform_117084_68	chr3	-	2887	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	3	2	3	-2	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGAATGAGGGCATGTG	3747	False	NA	-2	True	AATAAA	-33	NA	89319167	89309277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
Isoform_117085_460	chr3	-	1776	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	3	1113	3	-415	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3747	False	NA	-15	True	AGTAAA	-18	NA	89319167	89310388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
Isoform_117086_76	chr3	-	1770	8	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	-18	-415	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	105.155666921542	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3719	False	NA	-15	True	AGTAAA	-18	NA	89319195	89310388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319124
Isoform_117087_10	chr3	-	2855	8	NIC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	35	junction_7	105.155666921542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAATGAGGGCATGTGTG	3747	False	NA	0	True	AATAAA	-35	NA	89319167	89309275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319124
Isoform_117093_953	chr3	-	743	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	105	1	-59	-1	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	953	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTGTGGTTATAAGACTG	NA	False	NA	-13	True	ATTAAA	-21	NA	89325585	89322779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89323271_89323580_89323709_89325461
Isoform_11710_5	chr11	-	4508	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	34	98	3	-98	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTATATTTGTGTAT	NA	False	NA	-6	True	ATTAAA	-31	NA	8961157	8943234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
Isoform_117103_11	chr3	-	2615	10	FSM	ENSMUSG00000027947.12	ENSMUST00000197679.5	8639	10	11	6013	11	-748	multi-exon	FALSE	canonical	2	3	junction_6	3.80058475033046	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAACAAAACCAAA	NA	False	NA	NA	False	ACTAAA	-22	NA	89820492	89777378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
Isoform_117104_19	chr3	-	2589	10	FSM	ENSMUSG00000027947.12	ENSMUST00000197679.5	8639	10	37	6013	3	-748	multi-exon	FALSE	canonical	2	3	junction_6	3.80058475033046	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAACAAAACCAAA	NA	False	NA	NA	False	ACTAAA	-22	NA	89820466	89777378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
Isoform_11711_23	chr11	-	4438	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	34	168	3	-168	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGTGGGATGTTGGT	NA	False	NA	-76	True	AATAAA	-19	NA	8961157	8943304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
Isoform_117110_4	chr3	-	5500	27	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	48	3	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	40.516561008757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTAATTTGTCTCTTT	3860	False	NA	-4	True	TATAAA	-38	NA	89867888	89846792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853586_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
Isoform_117119_15	chr3	-	4824	21	ISM	ENSMUSG00000060671.13	ENSMUST00000069805.14	5559	27	3236	8	2161	0	3prime_fragment	FALSE	canonical	3	134	junction_19	22.7078730840209	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	7048	False	NA	-7	True	TATAAA	-35	NA	89864700	89846795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604
Isoform_11712_12	chr11	-	5013	7	NNC	ENSMUSG00000020413.12	novel	2792	7	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	72	junction_5	48.4389650316079	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTACTTGGAATTCAT	NA	False	NA	84	True	AATAAA	-13	NA	8961141	8943144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496
Isoform_117120_92	chr3	-	5509	27	FSM	ENSMUSG00000060671.13	ENSMUST00000069805.14	5559	27	50	0	50	0	multi-exon	TRUE	canonical	3	88	junction_26	26.7970677544519	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTGTCTCTTTTCTTT	3862	False	NA	1	True	TATAAA	-43	NA	89867886	89846787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
Isoform_117121_31	chr3	-	5578	27	FSM	ENSMUSG00000060671.13	ENSMUST00000069805.14	5559	27	-19	0	-19	0	multi-exon	FALSE	canonical	3	88	junction_26	26.7970677544519	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTGTCTCTTTTCTTT	3793	False	NA	1	True	TATAAA	-43	NA	89867955	89846787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
Isoform_117123_3	chr3	-	5356	28	NIC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_27	39.7802606301476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGAGTAATTTGTCTCT	1332	False	NA	-6	True	TATAAA	-36	NA	89870416	89846794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870334
Isoform_117124_59	chr3	-	5467	28	FSM	ENSMUSG00000060671.13	ENSMUST00000168276.8	4265	28	159	-1361	-70	1	multi-exon	FALSE	canonical	3	87	junction_27	29.2541017489138	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGAGTAATTTGTCTCT	1092	False	NA	-6	True	TATAAA	-36	NA	89870656	89846794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
Isoform_117128_3	chr3	-	5345	26	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	80	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	41.9719144190493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	3892	False	NA	-2	True	TATAAA	-40	NA	89867856	89846790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89848739_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
Isoform_117129_3	chr3	-	5767	26	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	32	-3	intron_retention	FALSE	canonical	3	88	junction_25	27.2835774780361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	3844	False	NA	-2	True	TATAAA	-40	NA	89867904	89846790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
Isoform_117130_3	chr3	-	5650	27	NIC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-10	1	intron_retention	FALSE	canonical	3	87	junction_26	29.7938677618905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGAGTAATTTGTCTCT	1152	False	NA	-6	True	TATAAA	-36	NA	89870596	89846794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
Isoform_117133_61	chr3	-	1060	7	FSM	ENSMUSG00000027944.14	ENSMUST00000197767.5	1092	7	28	4	-18	0	multi-exon	FALSE	canonical	3	138	junction_5	640.345588118027	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTCTTAGTCTTGGTT	7249	False	NA	NA	False	AATAAA	-15	NA	89905945	89902763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044_89905311_89905834
Isoform_117134_56	chr3	-	1120	7	FSM	ENSMUSG00000027944.14	ENSMUST00000197767.5	1092	7	-30	2	1	1	multi-exon	FALSE	canonical	3	138	junction_5	640.345588118027	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7191	False	NA	NA	False	AATAAA	-17	NA	89906003	89902761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044_89905311_89905834
Isoform_117137_69	chr3	-	1078	6	ISM	ENSMUSG00000027944.14	ENSMUST00000198782.2	855	7	267	-169	240	0	3prime_fragment	FALSE	canonical	3	1573	junction_5	159.470373424031	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7765	False	NA	NA	False	AATAAA	-16	NA	89905429	89902762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044
Isoform_117143_883	chr3	-	1071	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	59	9	-18	1	multi-exon	FALSE	canonical	3	1573	junction_5	145.593040126695	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7249	False	NA	NA	False	AATAAA	-17	NA	89905945	89902761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
Isoform_117144_587	chr3	-	1128	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	1	10	1	0	multi-exon	FALSE	canonical	3	1573	junction_5	145.593040126695	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7191	False	NA	NA	False	AATAAA	-16	NA	89906003	89902762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
Isoform_117148_30	chr3	-	1199	7	NIC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	656.238629531125	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7221	False	NA	NA	False	AATAAA	-17	NA	89905973	89902761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905411_89905834
Isoform_11715_108	chr11	-	4596	8	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	72	junction_5	46.4880937137979	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	92	True	AATAAA	-21	NA	8961150	8943136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496_8960625_8961058
Isoform_117153_31	chr3	-	1293	6	FSM	ENSMUSG00000027944.14	ENSMUST00000199014.5	1280	6	-11	-2	0	1	multi-exon	FALSE	canonical	3	1706	junction_4	119.761429517186	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7190	False	NA	NA	False	AATAAA	-17	NA	89906004	89902761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89905311_89905834
Isoform_117164_16	chr3	-	3531	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	282.60942435576	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3548	False	NA	-11	True	AATAAA	-19	NA	89959781	89907448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_117165_29	chr3	-	3478	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	260.888650107861	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3536	False	NA	-11	True	AATAAA	-19	NA	89959793	89907448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117169_18	chr3	-	3513	29	FSM	ENSMUSG00000042520.17	ENSMUST00000029553.16	3509	29	-5	1	2	-1	multi-exon	FALSE	canonical	3	137	junction_1	263.472271321105	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCTCACCTTAATGTG	3552	False	NA	-10	True	AATAAA	-20	NA	89959777	89907447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_117170_46	chr3	-	3456	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	239.227732847313	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCTCACCTTAATGTG	3544	False	NA	-10	True	AATAAA	-20	NA	89959785	89907447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117179_16	chr3	-	3430	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	246.854055170629	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3533	False	NA	-11	True	AATAAA	-19	NA	89959796	89907448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_11718_24	chr11	-	4291	6	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	3	-7	intron_retention	FALSE	canonical	3	12	junction_5	75.3482581085986	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTACTTGGAATTCATT	NA	False	NA	85	True	AATAAA	-14	NA	8961157	8943143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8961058
Isoform_117183_37	chr3	-	3404	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	221.790525129089	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3543	False	NA	-12	True	AATAAA	-18	NA	89959786	89907449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117199_28	chr3	-	3813	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-4	-245	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	254.875579890443	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3543	False	NA	-4	True	AATATA	-14	NA	89959786	89907844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117204_16	chr3	-	4007	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	398	-13	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	233.629060099355	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACAAACCTCTAC	8121	False	NA	86	True	AAAAAG	-5	NA	89955208	89907612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
Isoform_117209_16	chr3	-	4108	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	257.541526273147	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTCTGCCCATTCTTG	3552	False	NA	NA	False	AAAAAG	-27	NA	89959777	89907590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_117212_34	chr3	-	3799	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-5	-245	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	232.539682810553	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3542	False	NA	-4	True	AATATA	-14	NA	89959787	89907844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_11722_27	chr11	-	2983	3	FSM	ENSMUSG00000035455.13	ENSMUST00000109664.2	2807	3	1	-177	1	-87	multi-exon	FALSE	canonical	3	23	junction_1	194	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACGGAGTTGCTTCATT	NA	False	NA	-8	True	AATAAA	-21	NA	11758931	11750374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_11753064_11755958_11756216_11758894
Isoform_117236_15	chr3	-	3828	28	FSM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	-5	250	-5	-245	multi-exon	FALSE	canonical	3	275	junction_1	252.379539778417	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3542	False	NA	-4	True	AATATA	-14	NA	89959787	89907844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_117239_31	chr3	-	3759	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	1	-243	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	225.006501963668	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3548	False	NA	-2	True	AATATA	-16	NA	89959781	89907842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117253_22	chr3	-	3805	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-243	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	228.423841363276	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3552	False	NA	-2	True	AATATA	-16	NA	89959777	89907842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_117257_45	chr3	-	3747	28	FSM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	-17	245	-4	-245	multi-exon	FALSE	canonical	3	275	junction_1	196.719480946381	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3543	False	NA	-4	True	AATATA	-14	NA	89959786	89907844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117258_44	chr3	-	3990	28	FSM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	-12	-3	1	-2	multi-exon	FALSE	canonical	3	275	junction_1	196.719480946381	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTCAGCCTCTGCCCA	3548	False	NA	NA	False	AAAAAG	-21	NA	89959781	89907596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_11727_128	chr11	-	2856	3	FSM	ENSMUSG00000035455.13	ENSMUST00000171938.2	2974	3	33	85	3	-85	multi-exon	FALSE	canonical	3	61	junction_2	284.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGAGTTGCTTCATTTT	NA	False	NA	-6	True	AATAAA	-23	NA	11758929	11750372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_11753064_11756095_11756216_11758884
Isoform_117277_38	chr3	-	3496	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	245.100808648197	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3552	False	NA	-4	True	AATAAA	-19	NA	89959777	89913526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_117278_75	chr3	-	3435	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	289	junction_17	212.482304204374	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3548	False	NA	-4	True	AATAAA	-19	NA	89959781	89913526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117282_28	chr3	-	3469	26	FSM	ENSMUSG00000042520.17	ENSMUST00000199834.5	3494	26	25	0	12	0	multi-exon	FALSE	canonical	3	204	junction_21	230.048746138726	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3532	False	NA	-4	True	AATAAA	-19	NA	89959797	89913526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117285_60	chr3	-	3483	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	216.717534131413	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCGTTCTTTCCGTGC	3552	False	NA	-2	True	AATAAA	-21	NA	89959777	89913524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_117288_108	chr3	-	3428	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	177.654063843189	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCGTTCTTTCCGTGC	3542	False	NA	-2	True	AATAAA	-21	NA	89959787	89913524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117290_18	chr3	-	3462	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	177.654063843189	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCGTTCTTTCCGTGC	3508	False	NA	-2	True	AATAAA	-21	NA	89959821	89913524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_117296_20	chr3	-	3422	25	FSM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	-18	225	2	0	multi-exon	FALSE	canonical	3	158	junction_17	264.856079891619	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3552	False	NA	-3	True	AATAAA	-20	NA	89959777	89913525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_117297_44	chr3	-	3362	25	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	158	junction_17	234.13700879803	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCGTTCTTTCCGTGC	3548	False	NA	-2	True	AATAAA	-21	NA	89959781	89913524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_11730_1152	chr11	-	2846	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	30	85	3	-85	multi-exon	FALSE	canonical	3	411	junction_2	109.5	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGAGTTGCTTCATTTT	NA	False	NA	-6	True	AATAAA	-23	NA	11758929	11750372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_11753064_11756095_11756216_11758894
Isoform_117304_45	chr3	-	572	4	FSM	ENSMUSG00000090733.7	ENSMUST00000200305.2	546	4	-25	-1	0	1	multi-exon	FALSE	canonical	3	63	junction_3	8789.54951443285	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTTGTCTTGTTTAAC	NA	False	NA	-5	True	AATAAA	-16	NA	90120955	90119976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120687
Isoform_117305_3398	chr3	-	345	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	3	-3	0	-1	multi-exon	TRUE	canonical	3	13930	junction_3	2970.01597451746	3398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTCTTGTTTAACTG	NA	False	NA	-3	True	AATAAA	-18	NA	90120955	90119974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
Isoform_117307_3	chr3	-	1358	10	FSM	ENSMUSG00000027938.12	ENSMUST00000107369.2	1404	10	47	-1	47	1	multi-exon	TRUE	canonical	2	4	junction_7	1.89215404065849	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTTTTTCACTATGT	NA	False	NA	NA	False	AATAAA	-20	NA	90150403	90144875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90145229_90145356_90145454_90145618_90145704_90145789_90145859_90145951_90146059_90146190_90146287_90149238_90149361_90149517_90149753_90150028_90150144_90150324
Isoform_117308_5	chr3	-	1816	9	ISM	ENSMUSG00000027932.15	ENSMUST00000132041.2	2016	10	449	1	-234	-1	intron_retention	FALSE	canonical	3	73	junction_6	21.5895663458069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGGCCCATCTTCGAG	NA	False	NA	-20	True	AATAAA	-11	NA	90296522	90292548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996
Isoform_117309_4	chr3	-	2418	9	ISM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	111	2	111	0	intron_retention	FALSE	canonical	3	73	junction_6	21.5895663458069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGCCCATCTTCGAGA	NA	False	NA	-19	True	AATAAA	-12	NA	90297123	90292547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996
Isoform_11731_57	chr11	-	2904	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	-30	87	-27	-87	multi-exon	FALSE	canonical	3	411	junction_2	109.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACGGAGTTGCTTCATT	NA	False	NA	-8	True	AATAAA	-21	NA	11758989	11750374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_11753064_11756095_11756216_11758894
Isoform_117311_143	chr3	-	2281	10	FSM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	-22	0	-11	0	multi-exon	FALSE	canonical	3	73	junction_6	21.4101625806157	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATCTTCGAGAGT	NA	False	NA	-17	True	AATAAA	-14	NA	90297256	90292545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
Isoform_117318_24	chr3	-	4335	31	FSM	ENSMUSG00000027933.12	ENSMUST00000071488.8	4038	31	-305	8	5	0	multi-exon	FALSE	canonical	3	31	junction_1	39.1651914615801	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340915	90298702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90299219_90299299_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
Isoform_117329_263	chr3	-	4292	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	45	0	45	0	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340791	90298702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
Isoform_117330_220	chr3	-	4416	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	-79	0	5	0	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340915	90298702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
Isoform_117332_23	chr3	-	4514	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	-177	0	-84	0	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90341013	90298702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
Isoform_117339_31	chr3	-	757	2	FSM	ENSMUSG00000027931.13	ENSMUST00000152510.2	949	2	311	-119	311	0	multi-exon	FALSE	canonical	3	173	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90358777	90357897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90358490_90358612
Isoform_117340_36	chr3	-	964	3	ISM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	10769	0	2379	0	intron_retention	FALSE	canonical	3	97	junction_2	38	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90362404	90357897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_90358490_90358612_90358705_90362124
Isoform_117342_46	chr3	-	4066	22	FSM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_16	35.8067374802507	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90373173	90357897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365701_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90370441_90370556_90371117_90371318_90372101
Isoform_117346_18	chr3	-	832	4	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	2379	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	63.2824356884805	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90362404	90357897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362355
Isoform_117352_23	chr3	-	2001	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	1	-74	1	66	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTACTTTAATCATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	90398339	90395266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
Isoform_117353_599	chr3	-	1598	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	1	329	1	7	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATTATGGTTTCA	NA	False	NA	-19	True	AATAAA	-30	NA	90398339	90395669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
Isoform_117363_401	chr3	-	1992	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	677	junction_3	303.893007487833	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGCTTTCTGTTTATT	NA	False	NA	-2	True	NA	NA	NA	90416780	90406263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
Isoform_117364_36	chr3	-	2015	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	677	junction_3	303.893007487833	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGCTTTCTGTTTATT	NA	False	NA	-2	True	NA	NA	NA	90416803	90406263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
Isoform_117365_27	chr3	-	2044	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	0	48	combination_of_known_junctions	FALSE	canonical	3	677	junction_3	303.893007487833	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGGTGTGTTAATAT	NA	False	NA	-4	True	NA	NA	NA	90416783	90406214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
Isoform_117371_92	chr3	-	3275	5	NIC	ENSMUSG00000001017.16	novel	3257	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	677	junction_3	338.147157314682	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGCTTTCTGTTTATT	NA	False	NA	-2	True	NA	NA	NA	90416780	90406263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90414934_90416497
Isoform_117375_634	chr3	-	1995	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	25	-8	1	-1	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGCTTTCTGTTTATT	NA	False	NA	-2	True	NA	NA	NA	90416780	90406263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
Isoform_117376_59	chr3	-	2047	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	-27	-8	-27	-1	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGCTTTCTGTTTATT	NA	False	NA	-2	True	NA	NA	NA	90416832	90406263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
Isoform_117377_36	chr3	-	2046	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	25	-59	1	50	multi-exon	TRUE	canonical	3	892	junction_3	230.9202459725	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTGTGTTAATATGT	NA	False	NA	-2	True	NA	NA	NA	90416780	90406212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
Isoform_117389_138	chr3	-	3277	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	-22	2	1	0	multi-exon	FALSE	canonical	3	892	junction_3	258.017804618208	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416780	90406264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
Isoform_117396_21	chr3	-	1853	5	FSM	ENSMUSG00000001017.16	ENSMUST00000076639.11	1842	5	-11	0	1	0	multi-exon	FALSE	canonical	3	97	junction_1	581.611769138143	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416780	90406264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90407415_90410402_90410587_90413414_90413569_90414851_90414934_90416497
Isoform_117399_41	chr3	-	1856	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	1	-536	1	0	multi-exon	FALSE	canonical	3	97	junction_1	566.644233624591	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416780	90406264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
Isoform_1174_211	SIRV6	-	189	1	FSM	SIRV6C	SIRV618	189	1	1	-1	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTAGCTGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	2546	2357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_-_2400_2500
Isoform_11740_70	chr11	-	2985	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	3	-85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	293.968630223627	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGAGTTGCTTCATTTT	NA	False	NA	-6	True	AATAAA	-23	NA	11758929	11750372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_11753064_11756095_11756216_11758021_11758161_11758894
Isoform_117408_141	chr3	-	610	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	66	1	-48	-1	multi-exon	FALSE	canonical	3	340	junction_1	21.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAATGTCTGTACCCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	90421633	90418341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90418672_90419302_90419457_90421507
Isoform_117409_5	chr3	-	704	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	-30	3	-30	0	multi-exon	FALSE	canonical	3	340	junction_1	21.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCAATGTCTGTACCCT	NA	False	NA	-6	True	AATAAA	-17	NA	90421729	90418343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_90418672_90419302_90419457_90421507
Isoform_11741_31	chr11	-	3145	3	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	1	-88	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_2	266.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACGGAGTTGCTTCAT	NA	False	NA	-9	True	AATAAA	-20	NA	11758931	11750375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_11753064_11756095_11756216_11758594
Isoform_117417_156	chr3	-	5307	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-12	-1764	-12	-5	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTCTTTGGTTTCCTA	NA	False	NA	-7	True	AATAAA	-16	NA	94489868	94404855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
Isoform_117419_7	chr3	-	5485	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-185	-1769	-18	0	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94490041	94404850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
Isoform_117421_24	chr3	-	5339	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-40	-1768	-40	-1	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTTTCCTAGACT	NA	False	NA	-3	True	AATAAA	-20	NA	94489896	94404851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
Isoform_117428_91	chr3	-	6100	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	155	6	-12	-6	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTCTTTGGTTTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	94489868	94404856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
Isoform_11743_73	chr11	-	2727	2	FSM	ENSMUSG00000035455.13	ENSMUST00000171080.8	2844	2	31	86	1	-86	multi-exon	FALSE	canonical	3	48	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGAGTTGCTTCATTT	NA	False	NA	-7	True	AATAAA	-22	NA	11758931	11750373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_11753064_11758894
Isoform_117431_12	chr3	-	6141	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	120	0	-47	0	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94489903	94404850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
Isoform_117436_110	chr3	-	2610	13	FSM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	24	-3	24	3	multi-exon	FALSE	canonical	3	34	junction_11	22.9474036294596	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGTGGGTCTTTTACTT	6465	False	NA	-2	True	AATAAA	-19	NA	94566154	94520060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
Isoform_117438_224	chr3	-	2519	12	FSM	ENSMUSG00000005968.15	ENSMUST00000196733.5	2555	12	38	-2	-31	0	multi-exon	FALSE	canonical	3	51	junction_9	16.8728840118112	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	6478	False	NA	-5	True	AATAAA	-16	NA	94566141	94520063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
Isoform_11744_55	chr11	-	2750	2	FSM	ENSMUSG00000035455.13	ENSMUST00000171080.8	2844	2	3	91	0	-91	multi-exon	FALSE	canonical	3	48	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGACGGAGTTGCTT	NA	False	NA	-12	True	AATAAA	-17	NA	11758959	11750378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_11753064_11758894
Isoform_117441_5	chr3	-	3073	11	NIC	ENSMUSG00000005968.15	novel	2555	12	NA	NA	23	0	intron_retention	FALSE	canonical	3	51	junction_8	17.5772580341759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCCCGTGGGTCTTT	6464	False	NA	-7	True	AATAAA	-14	NA	94566155	94520065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
Isoform_117442_3	chr3	-	2124	6	ISM	ENSMUSG00000085006.8	ENSMUST00000136988.8	905	7	944	-1246	944	1246	3prime_fragment	FALSE	canonical	0	0	junction_3	8.97997772825746	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGTCTTCATTTTTC	7669	False	NA	NA	False	ATTAAA	-26	NA	94572464	94567890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_94569357_94569628_94569793_94570413_94570523_94570836_94570956_94571042_94571127_94572282
Isoform_117443_3	chr3	-	2111	6	ISM	ENSMUSG00000068876.17	ENSMUST00000107272.7	4963	21	21799	5	21787	-5	3prime_fragment	FALSE	canonical	3	27	junction_1	6.21610810716802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCTTGTCTTCATTT	8890	False	NA	NA	False	ATTAAA	-23	NA	94671975	94667380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768
Isoform_117444_29	chr3	-	4978	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107272.7	4963	21	-19	4	10	-4	multi-exon	FALSE	canonical	3	13	junction_12	7.64509646767129	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGTCTTCATTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	94693793	94667379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685376_94685510_94685581_94685688_94685790_94686460_94687330_94693686
Isoform_117445_20	chr3	-	5004	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107273.9	5016	21	10	2	10	-2	multi-exon	FALSE	canonical	2	3	junction_17	8.61553828846463	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGTCTTCATTTTTC	NA	False	NA	NA	False	ATTAAA	-26	NA	94693793	94667377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685400_94685510_94685581_94685688_94685790_94686460_94687330_94693686
Isoform_117446_4	chr3	-	3667	16	NNC	ENSMUSG00000068876.17	novel	4963	21	NA	NA	10373	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	9.75340396420085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCTTGTCTTCATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	94683389	94667380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683352
Isoform_117447_6	chr3	-	4978	21	NNC	ENSMUSG00000068876.17	novel	4963	21	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.98832576178678	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGTCTTCATTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	94693795	94667379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_94668809_94669080_94669245_94669865_94669973_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685376_94685510_94685581_94685688_94685790_94686460_94687330_94693686
Isoform_11745_6	chr11	-	995	5	FSM	ENSMUSG00000020182.17	ENSMUST00000136810.8	964	5	-30	-1	-30	-1	multi-exon	FALSE	canonical	0	0	junction_4	46.0271658914602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	NA	False	NA	-2	True	AATAAA	-20	NA	11772951	11764101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772791
Isoform_117454_1554	chr3	-	924	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	28	231	28	-2	multi-exon	FALSE	canonical	3	1538	junction_1	134.402380931292	1554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGAGTTGGATTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	94794244	94791634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
Isoform_117461_25	chr3	-	4569	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	41.4428060444694	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922519	94914141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922421
Isoform_117462_10	chr3	-	4817	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-1	-10	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	41.4428060444694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922536	94913910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922421
Isoform_117463_35	chr3	-	4806	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	14	-10	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922734	94913910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
Isoform_117464_53	chr3	-	4597	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922756	94914141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
Isoform_117465_5	chr3	-	4740	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTGGTGCCTTT	NA	False	NA	0	True	AAAAAG	-15	NA	94922768	94914010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
Isoform_117466_18	chr3	-	4472	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	31	129	11	1	multi-exon	FALSE	canonical	1	6	junction_8	42.3657807080195	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922518	94914141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
Isoform_117468_9	chr3	-	4703	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	31	-102	11	-10	multi-exon	FALSE	canonical	1	6	junction_8	42.3657807080195	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922518	94913910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
Isoform_117469_65	chr3	-	4501	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922756	94914141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
Isoform_11747_4	chr11	-	1087	6	ISM	ENSMUSG00000020182.17	ENSMUST00000109659.9	1954	15	61075	-1	-6412	-1	3prime_fragment	FALSE	canonical	3	63	junction_5	20.3666393889615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	NA	False	NA	-2	True	AATAAA	-20	NA	11779333	11764101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101
Isoform_117470_48	chr3	-	4741	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-6	-10	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922765	94913910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
Isoform_117473_4	chr3	-	4665	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGTGTTTGGTGCCT	NA	False	NA	-2	True	AAAAAG	-13	NA	94922791	94914012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
Isoform_117479_1125	chr3	-	1288	10	FSM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	-15	3	-15	-3	multi-exon	FALSE	canonical	3	876	junction_3	370.873576676127	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCTTCAAATAGTGATA	NA	False	NA	-16	True	AATAAA	-19	NA	94949878	94940010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
Isoform_11748_29	chr11	-	1568	12	ISM	ENSMUSG00000020182.17	ENSMUST00000109659.9	1954	15	17148	-1	7369	-1	3prime_fragment	TRUE	canonical	3	45	junction_6	24.3211977738973	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	NA	False	NA	-2	True	AATAAA	-20	NA	11823260	11764101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133
Isoform_117485_1187	chr3	-	1270	10	FSM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	52	10	-10	0	multi-exon	FALSE	canonical	3	1001	junction_3	333.422654699207	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949873	94940014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
Isoform_11749_8	chr11	-	2187	15	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-1041	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	27.3593807365173	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	4597	False	NA	-2	True	AATAAA	-20	NA	11831670	11764101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831367
Isoform_11750_12	chr11	-	1959	15	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-813	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	27.3593807365173	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	4825	False	NA	-2	True	AATAAA	-20	NA	11831442	11764101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831367
Isoform_117500_3	chr3	-	1976	6	ISM	ENSMUSG00000028126.17	ENSMUST00000005768.8	3480	15	40940	-26	12677	0	3prime_fragment	FALSE	canonical	3	47	junction_2	4.45421149026402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAAATGCTTTTATT	6747	False	NA	-1	True	AATAAA	-44	NA	94973150	94965853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122
Isoform_117505_50	chr3	-	3578	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107236.9	3618	15	1	39	1	0	multi-exon	FALSE	canonical	3	17	junction_14	9.68798961896341	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTCTAGCAATCATT	1254	False	NA	-27	True	AATAAA	-18	NA	95014185	94965879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
Isoform_117509_34	chr3	-	3578	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107233.9	3663	15	57	28	2	-2	multi-exon	FALSE	canonical	3	28	junction_14	7.6080650011172	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAAGTTCTAGCAATCA	1255	False	NA	-29	True	AATAAA	-16	NA	95014184	94965881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990140_95013686
Isoform_117514_16	chr3	-	775	2	FSM	ENSMUSG00000028126.17	ENSMUST00000107229.2	724	2	-64	13	-12	-13	multi-exon	FALSE	canonical	3	23	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCAGCT	1241	False	NA	NA	False	AATAAA	-20	NA	95014198	95004366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95004630_95013686
Isoform_117515_97	chr3	-	811	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	60	183	-12	0	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1298	False	NA	-23	True	AATAAA	-28	NA	95041262	95037029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
Isoform_117516_60	chr3	-	868	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	3	183	3	0	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1241	False	NA	-23	True	AATAAA	-28	NA	95041319	95037029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
Isoform_117517_11	chr3	-	921	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	-50	183	-50	0	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1188	False	NA	-23	True	AATAAA	-28	NA	95041372	95037029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
Isoform_117518_7	chr3	-	721	6	NIC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_2	146.199042404525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1298	False	NA	-24	True	AATAAA	-27	NA	95041262	95037030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95037195_95037474_95037670_95040327_95040423_95040510_95040600_95040868_95040940_95041155
Isoform_117519_3	chr3	-	769	5	ISM	ENSMUSG00000092607.10	ENSMUST00000173462.3	666	6	60	2778	-12	-2214	5prime_fragment	FALSE	canonical	3	372	junction_4	25.2623732060153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTTTTGGGTT	1298	False	NA	NA	False	NA	NA	NA	95041262	95039817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
Isoform_11752_8	chr11	-	1015	5	NNC	ENSMUSG00000020182.17	novel	964	5	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	42.6438741204408	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	NA	False	NA	-2	True	AATAAA	-20	NA	11772958	11764101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772778
Isoform_117520_7	chr3	-	1132	2	FSM	ENSMUSG00000013707.4	ENSMUST00000013851.4	1122	2	-9	-1	-9	1	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGCTCACGGTTTAATC	NA	False	NA	NA	False	AATAAA	-16	NA	95049680	95046830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95047908_95049625
Isoform_117522_3	chr3	-	664	4	NIC	ENSMUSG00000038766.17	novel	1539	6	NA	NA	-7	-730	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	8.5764535535124	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGCTTCAGGTGTGTTT	8931	False	NA	NA	False	AAAACA	-15	NA	95125072	95111053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95111237_95111951_95112120_95113773_95113914_95124899
Isoform_117524_26	chr3	-	1922	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	0	1	0	-1	multi-exon	FALSE	canonical	3	62	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGGGCTTAGTTTTTT	6380	False	NA	-1	True	AATAAA	-15	NA	95135988	95126446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95127775_95135394
Isoform_117525_29	chr3	-	1481	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	441	1	441	-1	multi-exon	FALSE	canonical	3	62	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGGGCTTAGTTTTTT	6821	False	NA	-1	True	AATAAA	-15	NA	95135547	95126446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95127775_95135394
Isoform_117526_22	chr3	-	1236	2	FSM	ENSMUSG00000068860.6	ENSMUST00000090815.6	1959	2	520	203	520	-16	multi-exon	FALSE	canonical	3	31	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGCTAAAAAATACT	NA	False	NA	-17	True	AATATA	-5	NA	95148389	95144433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95144541_95147260
Isoform_117527_8	chr3	-	1426	2	FSM	ENSMUSG00000068860.6	ENSMUST00000090815.6	1959	2	534	-1	534	1	multi-exon	FALSE	canonical	3	31	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTTTTTTCCAGTACT	NA	False	NA	NA	False	AATAAA	-17	NA	95148375	95144229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95144541_95147260
Isoform_117529_10	chr3	-	767	3	FSM	ENSMUSG00000068860.6	ENSMUST00000107197.2	1289	3	506	16	506	-16	multi-exon	FALSE	canonical	3	16	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGCTAAAAAATACT	NA	False	NA	-17	True	AATATA	-5	NA	95148403	95144433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95144541_95147260_95147423_95147905
Isoform_11753_6	chr11	-	992	5	NNC	ENSMUSG00000020182.17	novel	964	5	NA	NA	231	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	40.5362492098122	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	False	NA	-3	True	AATAAA	-19	NA	11772690	11764102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772532
Isoform_117530_3	chr3	-	1428	11	Fusion	ENSMUSG00000068860.6_ENSMUSG00000028115.17	novel	1251	11	NA	NA	-21	231	multi-exon	TRUE	non_canonical	0	0	junction_7	2.94788059459674	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAAGGCTCTGAGTTTT	NA	False	NA	NA	False	AAAAAG	-20	NA	95158480	95148904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_-_95149173_95150042_95150142_95150308_95150396_95151452_95151585_95152295_95152399_95152960_95153144_95155886_95155919_95155953_95156112_95157116_95157182_95157477_95157574_95158275
Isoform_117532_550	chr3	-	2745	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	395	0	395	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4745	False	NA	NA	False	ATTAAA	-19	NA	95188992	95160984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
Isoform_117533_202	chr3	-	2865	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	275	0	275	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4625	False	NA	NA	False	ATTAAA	-19	NA	95189112	95160984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
Isoform_117536_3	chr3	-	564	2	FSM	ENSMUSG00000093424.4	ENSMUST00000176569.3	555	2	-7	-2	-7	2	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTACATTGTTGCT	9728	False	NA	NA	False	NA	NA	NA	95222445	95218686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95218919_95222113
Isoform_117542_8	chr3	-	4382	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107171.10	4573	22	-44	235	0	-235	multi-exon	FALSE	canonical	3	29	junction_11	47.7030211966969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGGTTTGTCTTAT	1644	False	NA	-18	True	NA	NA	NA	95264511	95231070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
Isoform_117543_61	chr3	-	4586	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107171.10	4573	22	-15	2	-15	-2	multi-exon	FALSE	canonical	3	29	junction_11	47.7030211966969	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1673	False	NA	-6	True	ATTAAA	-13	NA	95264482	95230837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
Isoform_117551_20	chr3	-	4629	22	FSM	ENSMUSG00000015697.15	ENSMUST00000015841.12	4658	22	29	0	-15	0	multi-exon	FALSE	canonical	3	19	junction_21	51.1160255943511	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1673	False	NA	-4	True	ATTAAA	-15	NA	95264482	95230835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264337
Isoform_117552_305	chr3	-	4591	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	31	0	-15	0	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1673	False	NA	-4	True	ATTAAA	-15	NA	95264482	95230835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
Isoform_117553_25	chr3	-	4620	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	2	0	0	0	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1644	False	NA	-4	True	ATTAAA	-15	NA	95264511	95230835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
Isoform_117557_15	chr3	-	5672	21	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	141	junction_10	31.3773803877889	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGGTCTGAAATGGT	1671	False	NA	-5	True	ATTAAA	-14	NA	95264484	95230836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
Isoform_117560_13	chr3	-	3884	18	FSM	ENSMUSG00000015850.12	ENSMUST00000015994.4	3856	18	-29	1	-22	-1	multi-exon	FALSE	canonical	1	3	junction_17	6.21918006589627	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATGCTCTTCGTTATG	NA	False	NA	NA	False	ATTAAA	-14	NA	95595198	95583514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592864_95595131
Isoform_117561_4	chr3	-	3995	18	FSM	ENSMUSG00000015850.12	ENSMUST00000117782.8	4036	18	38	3	-14	0	multi-exon	TRUE	canonical	1	3	junction_17	6.21918006589627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGCTCTTCGTTATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	95595190	95583513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592982_95595131
Isoform_117562_8	chr3	-	1897	11	FSM	ENSMUSG00000028108.17	ENSMUST00000117507.10	1901	11	4	0	2	0	multi-exon	FALSE	canonical	0	0	junction_8	2.86530975637888	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTGTCTTTAGTGCG	6909	False	NA	NA	False	AATAAA	-19	NA	95646877	95641458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
Isoform_11757_90	chr11	-	5058	17	FSM	ENSMUSG00000020176.18	ENSMUST00000093321.12	5061	17	3	0	3	0	multi-exon	TRUE	canonical	3	35	junction_14	7.38135319572231	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11987398	11880507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11987191
Isoform_117576_1142	chr3	-	2400	18	FSM	ENSMUSG00000028107.15	ENSMUST00000029752.15	2400	18	1	-1	1	1	multi-exon	TRUE	canonical	1	178	junction_5	104.738626737206	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662182	95647286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
Isoform_117580_18	chr3	-	2204	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	166	junction_16	126.775253278193	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662183	95647286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95662069
Isoform_117581_20	chr3	-	2281	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	21	junction_13	152.583161239208	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662183	95647288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658817_95658943_95660318_95660443_95661630_95661828_95662069
Isoform_117583_115	chr3	-	2157	16	FSM	ENSMUSG00000028107.15	ENSMUST00000163530.8	2157	16	1	-1	1	1	multi-exon	FALSE	canonical	1	51	junction_13	151.691997884602	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662182	95647286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
Isoform_117586_27	chr3	-	2508	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	4	-1	intron_retention	FALSE	canonical	1	178	junction_5	104.120554376886	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662191	95647288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
Isoform_11759_4	chr11	-	5132	18	NNC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	16.8867590069198	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTGTCCTGTCGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	11987399	11880509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11907751_11907827_11917531_11917686_11920422_11920643_11937595_11937675_11987191
Isoform_117590_33	chr3	-	3022	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	1	intron_retention	FALSE	canonical	1	178	junction_5	103.251279249541	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662182	95647286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
Isoform_11760_3	chr11	-	4894	16	NIC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	14.3396885135859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCCTGTCGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	11987400	11880508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11917531_11917686_11920422_11920643_11937595_11937675_11987191
Isoform_117601_3	chr3	-	4875	11	NIC	ENSMUSG00000028106.14	novel	7756	11	NA	NA	-8	-2940	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	33.6661551116251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACGTGCAATGTTGGGG	10004	False	NA	-10	True	AATAAA	-19	NA	95726183	95670592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
Isoform_117602_8	chr3	-	4763	11	NIC	ENSMUSG00000028106.14	novel	7756	11	NA	NA	1	-2938	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	33.6661551116251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTGCAATGTTGGGGTG	9967	False	NA	-8	True	AATAAA	-21	NA	95726069	95670590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
Isoform_117604_4	chr3	-	4695	10	FSM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-135	2938	-9	-2938	multi-exon	FALSE	canonical	3	28	junction_2	34.4318973563113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTGCAATGTTGGGGTG	9957	False	NA	-8	True	AATAAA	-21	NA	95726079	95670590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
Isoform_117605_4	chr3	-	4727	10	FSM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-167	2938	-21	-2938	multi-exon	FALSE	canonical	3	28	junction_2	34.4318973563113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTGCAATGTTGGGGTG	9989	False	NA	-8	True	AATAAA	-21	NA	95726111	95670590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
Isoform_117606_45	chr3	-	3289	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	20	-11	0	11	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAATTGAGTATTGCATT	9966	False	NA	7	True	ATTAAA	-26	NA	95726070	95679555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
Isoform_117608_17	chr3	-	3891	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	-589	-4	-504	4	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTCATGAATTGAGTA	9944	False	NA	0	True	ATTAAA	-19	NA	95726679	95679562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
Isoform_117610_17	chr3	-	3216	8	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-143	11915	3	-1	5prime_fragment	FALSE	canonical	3	55	junction_5	20.2957721544892	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAAAGTGTCATGAATT	10013	False	NA	-5	True	ATTAAA	-14	NA	95726087	95679567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
Isoform_117611_13	chr3	-	3815	8	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-741	11914	-510	0	5prime_fragment	FALSE	canonical	3	55	junction_5	20.2957721544892	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAGTGTCATGAATTG	9938	False	NA	-4	True	ATTAAA	-15	NA	95726685	95679566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
Isoform_117619_16	chr3	-	2538	17	NIC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	136.057834669673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTATGATATTTTTC	NA	False	NA	-37	True	ATTAAA	-13	NA	95763203	95737932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
Isoform_117626_1042	chr3	-	2339	16	FSM	ENSMUSG00000015748.14	ENSMUST00000015892.14	2933	16	97	497	-7	1	multi-exon	FALSE	canonical	3	400	junction_5	22.8428447343048	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTATGATATTTTTC	NA	False	NA	-37	True	ATTAAA	-13	NA	95763100	95737932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
Isoform_117632_346	chr3	-	437	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	35	16	35	4	multi-exon	FALSE	canonical	3	716	junction_2	92.5	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGCTTGGACATACAGA	NA	False	NA	NA	False	AATAAA	-21	NA	95778796	95769961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95770245_95777805_95777928_95778764
Isoform_117635_21	chr3	-	529	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	44	-85	44	85	multi-exon	FALSE	canonical	3	716	junction_2	92.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGAGCATTGACTGCTC	NA	False	NA	NA	False	AATAAA	-29	NA	95778787	95769860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95770245_95777805_95777928_95778764
Isoform_117637_7	chr3	-	473	3	NIC	ENSMUSG00000054312.7	novel	488	3	NA	NA	23	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAGGCTTGGACATAC	NA	False	NA	NA	False	AATAAA	-18	NA	95778808	95769964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95770245_95777805_95777955_95778764
Isoform_117638_17	chr3	-	1971	5	FSM	ENSMUSG00000038550.11	ENSMUST00000159739.8	1939	5	-31	-1	-5	1	multi-exon	FALSE	canonical	3	167	junction_2	14.8723737177358	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTTTTTTTTTTTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	95789548	95785813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492
Isoform_117641_5	chr3	-	1102	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	32	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	72.7268863626101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTTTTTTTTTTTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	95789354	95785813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788592_95789266
Isoform_117642_11	chr3	-	1063	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	70.7615714918769	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGCTTTTTTTTTTTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	95789517	95785815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788592_95789466
Isoform_117643_67	chr3	-	1412	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	32	1	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	52.0292225580971	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTTTTTTTTTTTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	95789354	95785813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266
Isoform_117644_231	chr3	-	1375	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	26	-3	0	1	multi-exon	FALSE	canonical	3	105	junction_5	32.3604697122894	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTTTTTTTTTTTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	95789517	95785813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
Isoform_117645_13	chr3	-	1441	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	-41	-2	-21	0	multi-exon	FALSE	canonical	3	105	junction_5	32.3604697122894	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789584	95785814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
Isoform_117646_4	chr3	-	1000	5	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	78.2959130478724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCTTTTTTTTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	95789354	95785816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95789266
Isoform_117650_9	chr3	-	741	6	FSM	ENSMUSG00000038543.14	ENSMUST00000090476.10	809	6	50	18	0	-14	multi-exon	FALSE	canonical	3	27	junction_2	2.22710574513201	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	95799267	95791283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95799196
Isoform_117651_3	chr3	-	1460	6	FSM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	56	415	56	-25	multi-exon	FALSE	canonical	3	9	junction_2	1.49666295470958	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAAAAATCAA	1447	False	NA	NA	False	GATAAA	-21	NA	95903257	95896155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95896946_95898112_95898215_95898755_95898861_95899449_95899591_95902833_95902981_95903082
Isoform_117652_123	chr3	-	2022	15	FSM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	615	0	-21	0	multi-exon	TRUE	canonical	3	42	junction_11	13.9571136130707	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCAGTGTTTGATGG	NA	False	NA	-5	True	AATAAA	-26	NA	95965163	95907143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95907464_95926920_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
Isoform_117653_6	chr3	-	392	2	FSM	ENSMUSG00000015747.6	ENSMUST00000140518.2	266	2	-126	0	-15	0	multi-exon	FALSE	canonical	3	103	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATCATAATTATC	NA	False	NA	NA	False	AATAAA	-16	NA	95965157	95964198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_95964427_95964993
Isoform_117654_194	chr3	-	525	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	-5	209	-5	66	multi-exon	FALSE	canonical	3	441	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTCCTTGATTTGTAC	NA	False	NA	-4	True	AATAAA	-18	NA	96104907	96104112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96104596_96104865
Isoform_117655_68	chr3	-	574	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	-57	212	-57	63	multi-exon	FALSE	canonical	3	441	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTATTCCTTGATTTG	NA	False	NA	-7	True	AATAAA	-15	NA	96104959	96104115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96104596_96104865
Isoform_117656_12	chr3	-	734	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	-3	-2	-3	2	multi-exon	FALSE	canonical	3	441	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGGTGCTCTTAATACCT	NA	False	NA	NA	False	AATAAA	-23	NA	96104905	96103901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96104596_96104865
Isoform_117657_5	chr3	-	746	2	ISM	ENSMUSG00000074398.6	ENSMUST00000098839.3	659	3	78	2	78	-2	3prime_fragment	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTCTTGTTTTTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	96465053	96463082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_96463377_96464601
Isoform_117658_59	chr3	-	1400	8	FSM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	24	3	2	-3	multi-exon	FALSE	canonical	3	65	junction_6	13.8534604827436	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96501473	96485190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
Isoform_117659_22	chr3	-	1234	7	FSM	ENSMUSG00000028104.15	ENSMUST00000145001.2	607	7	2	-629	2	-1	multi-exon	TRUE	canonical	3	25	junction_6	26.9794160220137	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTCTAACAGAGTGATG	NA	False	NA	-1	True	NA	NA	NA	96501473	96485188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96501399
Isoform_117661_10	chr3	-	1326	6	NIC	ENSMUSG00000028104.15	novel	607	7	NA	NA	12	-3	intron_retention	FALSE	canonical	3	25	junction_5	29.5540183393054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96501463	96485190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_96485905_96487113_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96501399
Isoform_117663_3	chr3	-	1159	8	NIC	ENSMUSG00000028100.12	novel	1110	8	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	18.0611207191761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTTTTTTTTTTTTTA	NA	False	NA	-6	True	AATAAA	-9	NA	96615854	96613388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615099_96615203_96615307_96615492_96615643
Isoform_117664_61	chr3	-	1096	8	FSM	ENSMUSG00000028100.12	ENSMUST00000171249.6	1110	8	15	-1	0	0	multi-exon	FALSE	canonical	3	52	junction_1	6.53405521487387	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTAAGTGA	NA	False	NA	-1	True	AATAAA	-14	NA	96615863	96613383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615099_96615126_96615307_96615492_96615643
Isoform_117665_5	chr3	-	1603	8	FSM	ENSMUSG00000028100.12	ENSMUST00000171249.6	1110	8	15	-508	0	506	multi-exon	FALSE	canonical	3	52	junction_1	6.53405521487387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATAGAGTTCTCTGTCC	NA	False	NA	NA	False	AAAAAG	-13	NA	96615863	96612876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615099_96615126_96615307_96615492_96615643
Isoform_117666_14	chr3	-	1145	8	FSM	ENSMUSG00000028100.12	ENSMUST00000029742.9	1039	8	-8	-98	0	-1	multi-exon	FALSE	canonical	3	11	junction_6	22.7075461699679	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTTTTTTTTTAAGT	NA	False	NA	-3	True	AATAAA	-12	NA	96615863	96613385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615125_96615203_96615307_96615492_96615643
Isoform_117669_11	chr3	-	2403	15	FSM	ENSMUSG00000028099.9	ENSMUST00000154679.8	2406	15	-1	4	-1	-4	multi-exon	FALSE	canonical	3	35	junction_14	52.4860039652944	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATATGTATCTGTTC	NA	False	NA	NA	False	AATAAA	-13	NA	96634758	96618842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634428
Isoform_117671_343	chr3	-	2200	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	155	35	2	-2	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634789	96618840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
Isoform_117673_13	chr3	-	2297	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	58	35	58	-2	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634886	96618840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
Isoform_117675_19	chr3	-	2034	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_13	58.8212617035912	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634789	96618840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96634664
Isoform_117677_58	chr3	-	2296	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	3	-2	intron_retention	FALSE	canonical	3	175	junction_5	22.7614331762454	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634788	96618840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631369_96633149_96633316_96634664
Isoform_117680_10	chr3	-	2144	13	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	17	junction_12	61.1411731614266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATATGTATCTGTTC	NA	False	NA	NA	False	AATAAA	-13	NA	96634804	96618842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631369_96634664
Isoform_117683_20	chr3	-	921	3	FSM	ENSMUSG00000028099.9	ENSMUST00000125183.2	923	3	2	0	2	0	multi-exon	FALSE	canonical	3	207	junction_1	7.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGGTGTGTGCCAGT	NA	False	NA	-4	True	AATGAA	-19	NA	96634789	96630738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96631369_96633149_96633316_96634664
Isoform_117685_201	chr3	-	1748	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	43	2807	9	398	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGGTCACTTGTCCA	1906	False	NA	-23	True	AGTAAA	-20	NA	96812619	96778403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
Isoform_117686_43	chr3	-	4591	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	24	-17	-10	17	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCACTGAATGTCATGGCT	1887	False	NA	NA	False	AATAAA	-31	NA	96812638	96775579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
Isoform_117688_3	chr3	-	1731	14	NIC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	5	396	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	41.6774029560356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGGGGTCACTTGTC	1902	False	NA	-25	True	AGTAAA	-18	NA	96812623	96778405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800832_96800921_96804648_96804753_96805807_96805868_96812497
Isoform_117691_12	chr3	-	6145	10	FSM	ENSMUSG00000038256.16	ENSMUST00000046521.14	6102	10	-47	4	-47	-4	multi-exon	FALSE	canonical	3	19	junction_9	9.10162107389884	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAACTGCCTTTTTGT	NA	False	NA	-13	True	AATAAA	-17	NA	97134727	97110981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
Isoform_117692_4	chr3	-	6065	10	NIC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	-54	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	12.5678405974913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGAACTGCCTTTTTG	NA	False	NA	-14	True	AATAAA	-16	NA	97134905	97110982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134790
Isoform_117693_5	chr3	-	6079	10	NIC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	33	-4	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	11.4309521329882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAACTGCCTTTTTGT	3709	False	NA	-13	True	AATAAA	-17	NA	97205200	97110981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97205072
Isoform_117694_3	chr3	-	5916	10	NNC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	-41	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	11.7041725175677	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGAACTGCCTTTTTG	NA	False	NA	-14	True	AATAAA	-16	NA	97134721	97110982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
Isoform_117695_5	chr3	-	1686	5	ISM	ENSMUSG00000038256.16	ENSMUST00000046521.14	6102	10	-58	10818	-58	4	5prime_fragment	FALSE	canonical	3	19	junction_4	10.0343161201947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAAAACAAAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	97134738	97121795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
Isoform_117697_4	chr3	-	1724	15	ISM	ENSMUSG00000028089.6	ENSMUST00000029730.5	3008	23	3	20262	3	-9969	5prime_fragment	FALSE	canonical	0	0	junction_8	74.0814843704593	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAATTGGAATCCAGGTC	NA	False	NA	NA	False	NA	NA	NA	97517516	97488319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
Isoform_117698_6	chr3	-	2787	11	ISM	ENSMUSG00000038170.16	ENSMUST00000168438.9	8264	46	186046	6	-5394	0	3prime_fragment	FALSE	canonical	1	1	junction_10	3.10644491340181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTATTTTCCTTTGC	212	False	NA	NA	False	ATTAAA	-15	NA	97609977	97597145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_97598170_97599636_97599684_97599911_97600051_97601251_97601396_97602207_97602435_97603194_97603315_97604305_97604531_97606424_97606550_97607110_97607301_97608873_97608994_97609551
Isoform_1177_467	SIRV6	+	1961	1	FSM	SIRV6A	SIRV603	1969	1	1	7	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATCATGGAAGATTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	9000	10961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6_+_9000_11000
Isoform_117701_51	chr3	-	6124	17	FSM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	67	-6	-11	6	multi-exon	FALSE	canonical	3	63	junction_16	8.347903928532	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTCTTATAGAAGTTT	NA	False	NA	-3	True	AATAAA	-21	NA	97675258	97646163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
Isoform_117721_6559	chr3	-	1825	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	66	2	66	-2	multi-exon	FALSE	canonical	3	1070	junction_1	240.376770374213	6559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGTGTCTGTGTGATC	NA	False	NA	-4	True	AGTAAA	-14	NA	98247240	98220487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
Isoform_117722_1475	chr3	-	1861	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	32	0	32	0	multi-exon	FALSE	canonical	3	1070	junction_1	240.376770374213	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	-2	True	AGTAAA	-16	NA	98247274	98220485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
Isoform_117734_169	chr3	-	3366	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGACTTGCTGGTTCCCT	NA	False	NA	-21	True	ATTAAA	-9	NA	100069718	100045501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
Isoform_117741_1226	chr3	-	3421	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	5	6	-5	-6	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGACTTGCTGGTTCCCT	NA	False	NA	-21	True	ATTAAA	-9	NA	100069718	100045501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
Isoform_117755_37	chr3	-	4701	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	39	3229	-5	-3229	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTCATGTTTGATT	NA	False	NA	-1	True	ATTAAA	-17	NA	100592780	100472752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
Isoform_117759_5	chr3	-	5856	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	49	2064	5	-2064	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTGTAGAAGTCTGT	NA	False	NA	NA	False	AATAAA	-44	NA	100592770	100471587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
Isoform_117760_4	chr3	-	4242	14	NIC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-3	-3232	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	34.4558717868481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCAGTGTCATGTTTG	NA	False	NA	-4	True	ATTAAA	-14	NA	100592778	100472755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876_100592004_100592457
Isoform_117765_11	chr3	-	1674	2	ISM	ENSMUSG00000008763.17	ENSMUST00000123442.2	508	3	-681	-31	-486	31	intron_retention	FALSE	canonical	3	133	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTAAAGAGGTAATAAGC	NA	False	NA	NA	False	AAGAAA	-8	NA	100593305	100563345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_100563591_100591876
Isoform_117777_123	chr3	-	4571	23	FSM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	-30	0	-30	0	multi-exon	FALSE	canonical	3	226	junction_14	22.0712594988997	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100877009	100846175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
Isoform_117778_532	chr3	-	4540	23	FSM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	1	0	1	0	multi-exon	TRUE	canonical	3	226	junction_14	22.0712594988997	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100876978	100846175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
Isoform_117780_15	chr3	-	4589	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	5	2	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_17	74.8433019633104	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATGCTGTGTGTTCA	NA	False	NA	-5	True	AATAAA	-19	NA	100876974	100846173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100867950_100868002_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
Isoform_117790_46	chr3	-	3102	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-210	3010	-210	-3010	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGACTCGGCGCTCTCT	4571	False	NA	0	True	ACTAAA	-21	NA	101017804	100950557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
Isoform_117792_65	chr3	-	6039	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-166	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.8538328410674	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGACTTGTGTGAGGA	4615	False	NA	-7	True	ATTAAA	-14	NA	101017760	100947551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_100949835_100949859_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
Isoform_117796_19	chr3	-	4497	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-210	-1590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8538328410674	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATCACGTGCAGCTCT	4571	False	NA	-5	True	AATAAA	-15	NA	101017804	100949137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_100949835_100949859_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
Isoform_117801_4	chr3	-	1157	5	FSM	ENSMUSG00000027863.9	ENSMUST00000029456.5	1153	5	-13	9	-13	0	multi-exon	FALSE	canonical	2	4	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGTGAGCATGCCCACT	NA	False	NA	NA	False	AATAAA	-22	NA	101195268	101183223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_101183590_101187103_101187227_101190346_101190578_101194722_101195032_101195140
Isoform_11782_237	chr11	-	5604	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	9	2	9	0	multi-exon	FALSE	canonical	3	223	junction_7	88.5788303358848	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414948	12186677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_117837_3861	chr3	-	3653	23	FSM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	21	5	21	-5	multi-exon	FALSE	canonical	3	297	junction_17	44.2662166204014	3861	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTTGAGTCCTTGT	NA	False	NA	-11	True	AATAAA	-19	NA	101511979	101483539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
Isoform_117844_5	chr3	-	2963	7	FSM	ENSMUSG00000044313.14	ENSMUST00000061831.11	3558	7	-10	605	-10	2	multi-exon	FALSE	canonical	0	0	junction_4	1.34370962471642	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTGGTTTCATGTGAT	NA	False	NA	NA	False	AATATA	-13	NA	101743549	101720996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_101722569_101725938_101726134_101726681_101726861_101730555_101730848_101734046_101734188_101742309_101742581_101743236
Isoform_117847_14	chr3	-	2335	4	ISM	ENSMUSG00000027860.16	ENSMUST00000161021.2	818	5	992	-1483	2	20	3prime_fragment	FALSE	canonical	3	141	junction_3	77.2801541291309	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGCATGGAATATTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	102073254	102064012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088
Isoform_117850_7	chr3	-	2358	4	ISM	ENSMUSG00000027860.16	ENSMUST00000161021.2	818	5	969	-1483	-21	20	3prime_fragment	FALSE	canonical	3	141	junction_3	77.2801541291309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGCATGGAATATTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	102073277	102064012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088
Isoform_117851_4	chr3	-	3171	4	ISM	ENSMUSG00000027860.16	ENSMUST00000161021.2	818	5	954	-2281	-36	818	3prime_fragment	FALSE	canonical	3	141	junction_3	77.2801541291309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATAGCCTACTCTTTT	NA	False	NA	-5	True	NA	NA	NA	102073292	102063214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088
Isoform_117854_3	chr3	-	3201	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-452	818	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	110.3653025185	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATAGCCTACTCTTTT	NA	False	NA	-5	True	NA	NA	NA	102073708	102063214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102073513
Isoform_117856_14	chr3	-	2961	4	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	37044	3134	-676	0	3prime_fragment	FALSE	canonical	3	166	junction_1	66.1379030679248	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102074965	102064032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153
Isoform_11786_25	chr11	-	5646	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	-33	2	-30	0	multi-exon	FALSE	canonical	3	223	junction_7	88.5788303358848	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414990	12186677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_117860_62	chr3	-	3326	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	71	3134	71	0	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102111938	102064032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
Isoform_117861_23	chr3	-	3410	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	2	3119	2	15	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAATTGGCATGGAATA	NA	False	NA	NA	False	ATTAAA	-13	NA	102112007	102064017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
Isoform_117864_15	chr3	-	4162	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	52	2317	52	817	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCATAGCCTACTCTTT	NA	False	NA	-6	True	NA	NA	NA	102111957	102063215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
Isoform_117865_4	chr3	-	6587	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	-56	0	-56	0	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATAGTGCAGTTCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	102112065	102060898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
Isoform_117868_4	chr3	-	2082	3	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	1839	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_2	65	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102071417	102064032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_102065814_102070614_102070850_102071351
Isoform_117869_24	chr3	-	649	3	FSM	ENSMUSG00000027860.16	ENSMUST00000162361.2	472	3	2	-179	2	2	multi-exon	FALSE	canonical	3	141	junction_2	87.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATGTACTTGTGTGTT	NA	False	NA	-9	True	NA	NA	NA	102073254	102070499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_102070850_102072670_102072804_102073088
Isoform_117870_11	chr3	-	849	3	FSM	ENSMUSG00000027860.16	ENSMUST00000162361.2	472	3	-21	-356	-21	179	multi-exon	FALSE	canonical	3	141	junction_2	87.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGTCTCTCTGGCCCA	NA	False	NA	-9	True	NA	NA	NA	102073277	102070322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_102070850_102072670_102072804_102073088
Isoform_117871_5	chr3	-	864	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-720	176	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	116.808604135141	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGCCGTCTCTCTGGC	NA	False	NA	-12	True	NA	NA	NA	102075009	102070325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102074975
Isoform_117872_5	chr3	-	1331	3	FSM	ENSMUSG00000027860.16	ENSMUST00000160226.8	617	3	-710	-4	-710	4	multi-exon	FALSE	canonical	3	188	junction_2	64	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTACTTGTGTGTTTC	NA	False	NA	-7	True	NA	NA	NA	102074999	102070497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_102070850_102072670_102072804_102074153
Isoform_117877_8	chr3	-	1835	7	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	70	9427	70	176	5prime_fragment	FALSE	canonical	3	72	junction_3	85.9348913745491	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGCCGTCTCTCTGGC	NA	False	NA	-12	True	NA	NA	NA	102111939	102070325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
Isoform_117882_3	chr3	-	844	4	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-738	177	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	119.08633656115	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGCCGTCTCTCTGGCC	NA	False	NA	-11	True	NA	NA	NA	102075027	102070324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102074975
Isoform_117883_5	chr3	-	651	4	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-713	9	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	119.08633656115	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTGTGTGTTTCTGTGT	NA	False	NA	-2	True	NA	NA	NA	102075002	102070492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102074975
Isoform_117884_5	chr3	-	3432	33	FSM	ENSMUSG00000027855.14	ENSMUST00000196988.5	3189	33	2	-245	2	3	multi-exon	TRUE	canonical	3	8	junction_28	25.0723951787618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843414	102725811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
Isoform_117885_4	chr3	-	3435	33	FSM	ENSMUSG00000027855.14	ENSMUST00000029448.11	3437	33	2	0	2	0	multi-exon	FALSE	canonical	3	8	junction_28	23.7190382064176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843414	102725814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
Isoform_117887_25	chr3	-	3265	32	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_31	16.9376649901153	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCTCATTGATTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	102843414	102725813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
Isoform_11789_54	chr11	-	5519	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	22	0	19	0	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414938	12186677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_117890_30	chr3	-	3270	32	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	14.4403037547212	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843414	102725814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
Isoform_117891_8	chr3	-	3147	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_30	18.8657243580933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843414	102725814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
Isoform_117893_4	chr3	-	3003	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	56	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	16.640279110907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATTGTATTCAGATA	NA	False	NA	NA	False	AATAAA	-20	NA	102843414	102725964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
Isoform_117894_3	chr3	-	3080	31	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	21.3706964478621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATTTCTCATTGATT	NA	False	NA	-4	True	ATTAAA	-12	NA	102843412	102725816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
Isoform_117904_37	chr3	-	8067	16	FSM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-40	-3842	-21	-3	multi-exon	FALSE	canonical	2	63	junction_1	12.16260206078	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCTGGTTTCAAT	NA	False	NA	-5	True	AATAAA	-15	NA	103698612	103647133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
Isoform_117908_3	chr3	-	7942	15	FSM	ENSMUSG00000008730.18	ENSMUST00000106845.9	3967	15	-231	-3744	-31	-3	multi-exon	FALSE	canonical	0	0	junction_6	25.0106099934587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCTGGTTTCAAT	NA	False	NA	-5	True	AATAAA	-15	NA	103698622	103647133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
Isoform_117911_4	chr3	-	2333	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	-138	2150	-138	130	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAATTTAATTTGTTCCA	NA	False	NA	NA	False	TATAAA	-45	NA	103716898	103710070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
Isoform_117912_13	chr3	-	4284	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	63	-2	-3	2	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATACTGTTTCCTTAT	NA	False	NA	1	True	AATAAA	-17	NA	103716697	103707918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
Isoform_117913_45	chr3	-	2137	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	63	2145	-3	135	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTGTTCCACTTGG	NA	False	NA	NA	False	NA	NA	NA	103716697	103710065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
Isoform_117919_10	chr3	-	6636	22	FSM	ENSMUSG00000052539.16	ENSMUST00000064371.14	6640	22	4	0	4	0	multi-exon	FALSE	canonical	3	11	junction_1	11.0079336469023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	104127686	103920574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_103923385_103923917_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
Isoform_11792_16	chr11	-	5592	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	-51	0	-51	0	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12415011	12186677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_117921_10	chr3	-	6586	21	FSM	ENSMUSG00000052539.16	ENSMUST00000121198.8	5912	21	-322	-352	-51	-14	multi-exon	FALSE	canonical	3	26	junction_1	8.46404158779953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAAAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	104127741	103920588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_103923385_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
Isoform_117922_8	chr3	-	3914	21	FSM	ENSMUSG00000052539.16	ENSMUST00000122303.2	3827	21	-132	45	4	-45	multi-exon	FALSE	canonical	3	21	junction_1	9.00152764812729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCAATCTCCCTTTGA	NA	False	NA	NA	False	ATTAAA	-38	NA	104127686	103923829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
Isoform_117925_15	chr3	-	7135	18	FSM	ENSMUSG00000032913.14	ENSMUST00000198332.2	3946	18	-41	-3148	21	0	multi-exon	FALSE	canonical	3	19	junction_3	20.1729545898912	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGTCTTCTCTTGCC	NA	False	NA	-20	True	AATAAA	-16	NA	104419213	104361295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
Isoform_117927_36	chr3	-	4016	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-62	3145	16	3	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTGTGTGTTGGATACA	NA	False	NA	-3	True	CATAAA	-18	NA	104419218	104364440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
Isoform_117928_5	chr3	-	5316	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-76	1859	2	731	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGAAAAGTTGTCTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	104419232	104363154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
Isoform_117929_5	chr3	-	7058	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	39	2	27	-1	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTCTGGTCTTCTCTTG	NA	False	NA	-22	True	AATAAA	-14	NA	104419117	104361297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
Isoform_117931_3	chr3	-	4054	18	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	23.8937961573645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGACCTTGTGTG	NA	False	NA	-12	True	CATAAA	-9	NA	104419228	104364449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_104365281_104368716_104369005_104369974_104370162_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
Isoform_117933_14	chr3	-	7010	17	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	19.5220228203944	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTCTGGTCTTCTCTT	NA	False	NA	-23	True	AATAAA	-13	NA	104419220	104361298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_104365281_104368716_104369005_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
Isoform_117934_6	chr3	-	3803	8	ISM	ENSMUSG00000032913.14	ENSMUST00000198089.5	1719	9	-264	6774	-7	2345	5prime_fragment	FALSE	canonical	3	75	junction_1	8.83869045614744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104419241	104395364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
Isoform_11796_234	chr11	-	5424	14	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	3	235	junction_6	74.428711772371	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGTGTGGACTTCATG	NA	False	NA	-2	True	AATAAA	-19	NA	12414938	12186676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_117970_2466	chr3	-	3535	20	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	27	-1	23	1	intron_retention	FALSE	canonical	3	1102	junction_11	86.7727314610285	2466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTCTTGCGTGTGTCT	NA	False	NA	-24	True	AAGAAA	-22	NA	104725594	104702150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
Isoform_117971_108	chr3	-	3803	20	ISM	ENSMUSG00000002227.16	ENSMUST00000166979.8	3584	21	17	-1	17	1	intron_retention	FALSE	canonical	3	1102	junction_11	86.7727314610285	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTCTTGCGTGTGTCT	NA	False	NA	-24	True	AAGAAA	-22	NA	104725862	104702150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
Isoform_117978_157	chr3	-	3416	21	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	3	106	junction_20	272.054755518076	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTCTTGCGTGTGTCT	NA	False	NA	-24	True	AAGAAA	-22	NA	104725611	104702150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725573
Isoform_117982_280	chr3	-	3433	21	FSM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	28	-1	24	1	multi-exon	TRUE	canonical	3	138	junction_20	265.434944948852	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTCTTGCGTGTGTCT	NA	False	NA	-24	True	AAGAAA	-22	NA	104725593	104702150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
Isoform_11799_24	chr11	-	5495	14	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_6	74.428711772371	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12415010	12186677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_117994_969	chr3	-	2920	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	115	158	10	-158	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTGTCTGTCCTTTC	9288	False	NA	-15	True	AATACA	-14	NA	104771706	104730252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
Isoform_117996_83	chr3	-	3556	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	-520	157	-520	-157	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTCTGTCCTTTCT	8653	False	NA	-14	True	AATACA	-15	NA	104772341	104730251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
Isoform_117998_12	chr3	-	3073	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	117	3	12	-3	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCTCCTTCCTGAGTG	9290	False	NA	NA	False	AGTAAA	-19	NA	104771704	104730097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
Isoform_118005_6	chr3	-	4829	6	FSM	ENSMUSG00000062127.12	ENSMUST00000197437.5	681	6	0	-4148	0	0	multi-exon	FALSE	canonical	3	7	junction_4	30.009331881933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTCTGGGGGAAAAGTC	1469	False	NA	-13	True	ATTAAA	-15	NA	104960270	104909232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940069_104946180_104946304_104960215
Isoform_118009_104	chr3	-	4858	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	-23	-1	-20	1	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCTGGGGGAAAAGTCT	1449	False	NA	-12	True	ATTAAA	-16	NA	104960290	104909231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
Isoform_118015_771	chr3	-	2774	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	126	5	4	-5	multi-exon	FALSE	canonical	3	276	junction_2	22.5302019520465	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTCAGTTTATTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	105594764	105585590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
Isoform_118019_9	chr3	-	2161	2	ISM	ENSMUSG00000027905.16	ENSMUST00000132008.2	2257	7	-5	3410	3	-3410	5prime_fragment	FALSE	canonical	3	347	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTCCCCTTGTCAGGGC	NA	False	NA	NA	False	NA	NA	NA	105594765	105592214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_105594050_105594439
Isoform_11802_79	chr11	-	5369	13	FSM	ENSMUSG00000020173.18	ENSMUST00000109650.8	5271	13	-99	1	-1	-1	multi-exon	FALSE	canonical	3	119	junction_8	114.138895649117	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGTGTGGACTTCATG	NA	False	NA	-2	True	AATAAA	-19	NA	12414958	12186676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_118021_74	chr3	-	2369	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	42	-4	-9	4	multi-exon	TRUE	canonical	3	409	junction_7	23.7667234354495	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTTCTCTTTATCCAG	NA	False	NA	-14	True	AATAAA	-16	NA	105708610	105634578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
Isoform_118022_286	chr3	-	1399	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-7	1015	-7	32	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGTGTCTTTTTGT	NA	False	NA	-12	True	ATTAAA	-41	NA	105708659	105635597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
Isoform_118037_3158	chr3	-	1101	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	863	7	10	-3	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	3158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAATTTATAAGTTTCA	NA	False	NA	-27	True	AATAAA	-9	NA	105866552	105850020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
Isoform_118038_298	chr3	-	1158	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	811	2	-12	2	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATAAGTTTCATACTC	NA	False	NA	-22	True	AATAAA	-14	NA	105866604	105850015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
Isoform_118039_339	chr3	-	972	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	836	163	1	37	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCAGTAAGGTATTTCT	NA	False	NA	-14	True	AATAAA	-33	NA	105866579	105850176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
Isoform_118051_427	chr3	-	2026	9	FSM	ENSMUSG00000040774.16	ENSMUST00000068301.11	2814	9	64	724	5	-1	multi-exon	FALSE	canonical	3	190	junction_8	25.7924407530579	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCTTTTTTCTCAATTT	NA	False	NA	-6	True	AATAAA	-15	NA	106455054	106410299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446920_106454995
Isoform_118052_158	chr3	-	3190	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	628	525	56	-525	multi-exon	FALSE	canonical	3	61	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGTTTTTCTGCCTGG	NA	False	NA	-10	True	AATAAA	-15	NA	107240361	107233261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107233621_107237530
Isoform_118054_17	chr3	-	3725	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	620	-2	48	2	multi-exon	FALSE	canonical	3	61	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGAGCTCCTCCGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	107240369	107232734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107233621_107237530
Isoform_118058_584	chr3	-	3220	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	-5	0	-5	0	multi-exon	FALSE	canonical	3	175	junction_2	23.6893963620857	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539015	107519847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
Isoform_118061_8	chr3	-	3143	20	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_18	52.4607754802473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539013	107519847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107535471_107535542_107538816
Isoform_118063_17	chr3	-	3175	21	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	51.0788361261296	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539010	107519847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_107520783_107521950_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
Isoform_118081_1429	chr3	-	3822	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	39	2	-16	-2	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAGTAGTCGTGTGTCT	NA	False	NA	-6	True	ATTAAA	-21	NA	107603837	107570437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
Isoform_118086_25	chr3	-	3938	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	-73	-2	-73	0	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTAGTCGTGTGTCTTTTT	NA	False	NA	-2	True	ATTAAA	-25	NA	107603949	107570433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
Isoform_118097_4	chr3	-	1318	8	FSM	ENSMUSG00000004035.13	ENSMUST00000004137.11	1377	8	58	1	58	-1	multi-exon	FALSE	canonical	1	5	junction_6	2.49897938350513	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTTTTCTTTGGTCG	NA	False	NA	-8	True	NA	NA	NA	107839075	107833650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107834297_107836185_107836297_107836378_107836475_107837589_107837691_107837788_107837871_107838143_107838209_107838630_107838707_107838934
Isoform_118099_3	chr3	-	1093	8	FSM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	60	0	26	0	multi-exon	FALSE	canonical	3	28	junction_3	8.51649060616507	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	1850	False	NA	-1	True	AGTAAA	-16	NA	107851005	107846162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850913
Isoform_118100_9	chr3	-	1178	9	Fusion	ENSMUSG00000068762.12_ENSMUSG00000089664.3	novel	1153	8	NA	NA	-345	0	multi-exon	FALSE	canonical	3	14	junction_7	13.2452821789496	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	7892	False	NA	-1	True	AGTAAA	-16	NA	107860782	107846162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107860362_107860439_107860681
Isoform_118101_4	chr3	-	1253	10	Fusion	ENSMUSG00000068762.12_ENSMUSG00000089664.3	novel	1153	8	NA	NA	-2469	0	multi-exon	FALSE	canonical	2	6	junction_8	17.5358539238757	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	5768	False	NA	-1	True	AGTAAA	-16	NA	107862906	107846162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107858112_107858224_107860362_107860439_107862841
Isoform_118103_3	chr3	-	1215	7	ISM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	353	9	353	-9	3prime_fragment	FALSE	canonical	3	154	junction_5	54.6547243053049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGAGTTGTGTCTTT	NA	False	NA	-9	True	AATAAA	-39	NA	107876246	107871020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078
Isoform_118104_123	chr3	-	1189	8	FSM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	117	5	117	-5	multi-exon	FALSE	canonical	3	154	junction_5	50.6947648547014	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTTGTGTCTTTTTCT	NA	False	NA	-5	True	AATAAA	-43	NA	107876482	107871016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
Isoform_118105_22	chr3	-	1107	7	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	117	-5	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	86.6033422501054	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTTGTGTCTTTTTCT	NA	False	NA	-5	True	AATAAA	-43	NA	107876482	107871016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875451_107875517_107876078_107876155_107876420
Isoform_118106_20	chr3	-	1010	6	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	117	-1	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	88.3388929068052	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTCTTTTTCTTTTG	NA	False	NA	-1	True	AATAAA	-19	NA	107876482	107871012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_107871613_107873402_107873514_107873594_107873691_107875451_107875517_107876078_107876155_107876420
Isoform_118107_5	chr3	-	2770	5	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	117	-2	intron_retention	FALSE	canonical	3	229	junction_3	30.9141957682874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTCTTTTTCTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	107876482	107871013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_107871613_107873402_107873514_107873594_107875517_107876078_107876155_107876420
Isoform_11811_81	chr11	-	5604	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	116.000901650261	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGTGTGGACTTCATG	NA	False	NA	-2	True	AATAAA	-19	NA	12414938	12186676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_118111_312	chr3	-	1032	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	32	0	0	0	multi-exon	FALSE	canonical	3	626	junction_6	40.3692143766479	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2074	False	NA	-4	True	AATAAA	-13	NA	107893737	107889017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
Isoform_118113_18	chr3	-	1382	7	NIC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	637	junction_1	38.7298334620742	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2075	False	NA	-4	True	AATAAA	-13	NA	107893736	107889017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107893426_107893673
Isoform_118116_15	chr3	-	1146	7	ISM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	456	0	289	0	3prime_fragment	FALSE	canonical	3	592	junction_3	57.9300344285146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	7039	False	NA	-4	True	AATAAA	-18	NA	107924833	107919570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666
Isoform_118118_318	chr3	-	1127	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	157	5	-10	1	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCATGAGTTGTGTCTT	6740	False	NA	-9	True	AATAAA	-13	NA	107925132	107919575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
Isoform_118119_221	chr3	-	1164	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	125	0	-42	0	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	6708	False	NA	-4	True	AATAAA	-18	NA	107925164	107919570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
Isoform_118120_11	chr3	-	1241	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	43	5	43	1	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCATGAGTTGTGTCTT	6626	False	NA	-9	True	AATAAA	-13	NA	107925246	107919575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
Isoform_118122_28	chr3	-	1686	8	FSM	ENSMUSG00000027890.18	ENSMUST00000029489.15	1707	8	20	1	-8	-1	multi-exon	FALSE	canonical	3	51	junction_7	25.3175747621437	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGATGTCTTTTCCTA	NA	False	NA	-5	True	AATAAA	-19	NA	107952190	107947724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107951952
Isoform_118123_13	chr3	-	1488	8	FSM	ENSMUSG00000027890.18	ENSMUST00000106670.2	777	8	16	-727	9	0	multi-exon	FALSE	canonical	3	28	junction_7	31.2429583903252	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107952166	107947725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952125
Isoform_118124_18	chr3	-	1469	8	FSM	ENSMUSG00000027890.18	ENSMUST00000178808.8	1462	8	-6	-1	1	-1	multi-exon	FALSE	canonical	3	22	junction_7	32.937169624258	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGATGTCTTTTCCTA	NA	False	NA	-5	True	AATAAA	-19	NA	107952181	107947724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952160
Isoform_118129_283	chr3	-	3658	18	FSM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	-10	2	-10	0	multi-exon	FALSE	canonical	3	198	junction_12	21.7907634157735	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993953	107981379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
Isoform_118130_194	chr3	-	3587	19	FSM	ENSMUSG00000027889.18	ENSMUST00000102637.8	3586	19	0	-1	0	-1	multi-exon	FALSE	canonical	3	124	junction_18	33.5369705707258	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCATGTGAAGGTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	107993967	107981378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
Isoform_118134_19	chr3	-	3847	18	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	124	junction_17	33.4984377056561	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993968	107981379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
Isoform_118136_11	chr3	-	3858	17	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-13	0	intron_retention	TRUE	canonical	3	198	junction_11	22.3550889061082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993980	107981377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
Isoform_118145_508	chr3	-	3224	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	35	3	35	-3	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCACTTTTATTTGTC	NA	False	NA	-13	True	ATTAAA	-29	NA	108053427	108014598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
Isoform_118158_4	chr3	-	4175	3	FSM	ENSMUSG00000048796.8	ENSMUST00000106655.2	4275	3	13	87	13	-3	multi-exon	FALSE	canonical	0	0	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTATGCTCTGTCCTT	NA	False	NA	-3	True	ATTAAA	-13	NA	108108137	108103089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108107032_108107440_108107479_108107942
Isoform_118160_5	chr3	-	2668	12	FSM	ENSMUSG00000048997.18	ENSMUST00000102633.9	3044	12	345	31	-103	-13	multi-exon	FALSE	canonical	3	3	junction_11	14.3354153142281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAACTCTTTA	3279	False	NA	NA	False	NA	NA	NA	108117905	108109568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108116232_108116412_108117660
Isoform_118161_4	chr3	-	2599	12	FSM	ENSMUSG00000048997.18	ENSMUST00000102633.9	3044	12	443	2	-5	-2	multi-exon	FALSE	canonical	3	3	junction_11	14.3354153142281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTGTCTCCCTGTTCTG	3377	False	NA	NA	False	AAGAAA	-26	NA	108117807	108109539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108116232_108116412_108117660
Isoform_118162_82	chr3	-	2450	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	-58	-5	-34	-1	multi-exon	FALSE	canonical	3	27	junction_7	7.33212111192934	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTCTCCCTGTTCTGT	3348	False	NA	NA	False	AAGAAA	-27	NA	108117836	108109538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108117660
Isoform_118165_3	chr3	-	2478	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	-15	-76	9	70	multi-exon	FALSE	canonical	3	27	junction_7	7.33212111192934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCCAAATGAGTGAGTG	3391	False	NA	NA	False	TATAAA	-32	NA	108117793	108109467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108117660
Isoform_118169_122	chr3	-	1930	12	FSM	ENSMUSG00000068739.14	ENSMUST00000102625.11	1866	12	-25	-39	4	39	multi-exon	FALSE	canonical	3	101	junction_3	974.241336537401	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCTGGGTCTC	NA	False	NA	0	True	NA	NA	NA	108352510	108333888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
Isoform_11818_45	chr11	-	5446	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	110.433304726878	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414952	12186677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_118186_5449	chr3	-	1872	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	-5	1703	-5	44	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	5449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGGGTCTCCCTGG	NA	False	NA	5	True	NA	NA	NA	108352519	108333883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
Isoform_118187_147	chr3	-	1897	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	-40	1713	-29	34	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAACCTTGTCTCTGCTGG	NA	False	NA	-5	True	NA	NA	NA	108352554	108333893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
Isoform_118204_6	chr3	-	2746	3	FSM	ENSMUSG00000068732.6	ENSMUST00000106622.3	2752	3	6	0	6	0	multi-exon	FALSE	canonical	1	2	junction_2	80.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	5576	False	NA	-14	True	AATAAA	-15	NA	108469480	108463740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108466277_108467502_108467635_108469402
Isoform_118205_358	chr3	-	2792	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	72	0	72	0	multi-exon	FALSE	canonical	3	163	junction_1	15	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	5346	False	NA	-14	True	AATAAA	-15	NA	108469710	108463740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108466277_108467502_108467635_108469586
Isoform_118208_33	chr3	-	2850	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	19	-5	19	5	multi-exon	FALSE	canonical	3	163	junction_1	15	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTTGTCATGTGTG	5293	False	NA	-9	True	AATAAA	-20	NA	108469763	108463735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108466277_108467502_108467635_108469586
Isoform_11821_17	chr11	-	5371	13	NNC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_8	139.626958356902	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414952	12186677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_118210_151	chr3	-	3034	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	11	453	11	-453	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGTTATCTGTCTCCT	NA	False	NA	-3	True	AATAAA	-15	NA	108629614	108586406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
Isoform_118216_15	chr3	-	3846	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	20	-368	20	368	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCGTTACATGTCTGC	NA	False	NA	NA	False	AATAAA	-18	NA	108629605	108585585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
Isoform_118217_10	chr3	-	3552	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	10	368	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCGTTACATGTCTGC	NA	False	NA	NA	False	AATAAA	-18	NA	108629615	108585585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
Isoform_118218_52	chr3	-	2722	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	20	-452	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTATCTGTCTCCTT	NA	False	NA	-2	True	AATAAA	-16	NA	108629605	108586405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
Isoform_118225_166	chr3	-	2429	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	-13	3	2	-3	multi-exon	FALSE	canonical	1	38	junction_10	22.0233461984726	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTCTGAGTTTTTCTT	NA	False	NA	0	True	AATAAA	-14	NA	108747840	108700494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
Isoform_118226_54	chr3	-	2453	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	-37	3	-22	-3	multi-exon	FALSE	canonical	1	38	junction_10	22.0233461984726	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTCTGAGTTTTTCTT	NA	False	NA	0	True	AATAAA	-14	NA	108747864	108700494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
Isoform_118227_5	chr3	+	2854	2	Antisense	novelGene_ENSMUSG00000027881.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAAGTGCTAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	108811132	108814334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_108812079_108812426
Isoform_118230_6	chr3	-	2308	7	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	6	-443	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	165.490852382306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTTTGTAGGTGT	6856	False	NA	-4	True	AATAAA	-14	NA	108819037	108810905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815651_108815721_108818479
Isoform_118237_18	chr3	-	3090	7	FSM	ENSMUSG00000027881.15	ENSMUST00000129273.8	3050	7	-42	2	-11	0	multi-exon	FALSE	canonical	3	28	junction_5	171.074707527313	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6839	False	NA	-9	True	AATAAA	-18	NA	108819054	108810122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
Isoform_118239_258	chr3	-	3038	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	-11	-1	-11	-1	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGGTGTTGGTTTCCC	6839	False	NA	-8	True	AATAAA	-19	NA	108819054	108810121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
Isoform_118257_89	chr3	-	3048	2	FSM	ENSMUSG00000049300.12	ENSMUST00000190378.2	3051	2	4	-1	4	1	multi-exon	FALSE	canonical	3	26	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTAACCTGGTCTATT	NA	False	NA	-7	True	AATAAA	-19	NA	110158305	110153426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_110155172_110157002
Isoform_118258_93	chr3	-	1803	15	FSM	ENSMUSG00000027981.15	ENSMUST00000106536.8	1839	15	35	1	-35	-1	multi-exon	FALSE	canonical	3	86	junction_8	14.9497457489813	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTCTAATTTTTCATT	NA	False	NA	-2	True	AATAAA	-15	NA	113423763	113399113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
Isoform_118262_21	chr3	-	3452	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	38	398	-32	-1	multi-exon	FALSE	canonical	3	32	junction_1	23.6233195061532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTCTAATTTTTCATT	NA	False	NA	-2	True	AATAAA	-15	NA	113423760	113399113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
Isoform_118266_3	chr3	-	1570	2	FSM	ENSMUSG00000027981.15	ENSMUST00000127068.2	1532	2	-36	-2	34	2	multi-exon	FALSE	canonical	3	105	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	113423764	113420724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_113422042_113423511
Isoform_118267_8	chr3	-	3016	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	25	5	25	-5	multi-exon	FALSE	canonical	3	24	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCTTTTGTGAAGAA	NA	False	NA	-4	True	AATAAA	-13	NA	115508696	115504086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_115506764_115508357
Isoform_118268_4	chr3	-	3082	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	-42	6	-42	-6	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTCTTTTGTGAAGA	NA	False	NA	-5	True	AATAAA	-12	NA	115508763	115504087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_115506764_115508357
Isoform_118271_40	chr3	-	2876	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	165	5	165	-5	multi-exon	FALSE	canonical	3	24	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCTTTTGTGAAGAA	NA	False	NA	-4	True	AATAAA	-13	NA	115508556	115504086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_115506764_115508357
Isoform_118274_7	chr3	-	751	3	FSM	ENSMUSG00000054426.12	ENSMUST00000188260.7	739	3	-11	-1	-1	1	multi-exon	FALSE	canonical	2	5	junction_2	22	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCTTGGCTATGGTGA	933	False	NA	-4	True	NA	NA	NA	115681754	115675228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_115675488_115679862_115680025_115681424
Isoform_118275_10	chr3	-	773	3	NNC	ENSMUSG00000054426.12	novel	739	3	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	22.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCTTGGCTATGGTGA	916	False	NA	-4	True	NA	NA	NA	115681771	115675228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_115675488_115679862_115680030_115681424
Isoform_118276_17	chr3	-	574	2	FSM	ENSMUSG00000054426.12	ENSMUST00000185424.2	433	2	-140	-1	2	-1	multi-exon	FALSE	canonical	3	36	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGCCTTGGCTATGGT	946	False	NA	-6	True	NA	NA	NA	115681741	115675230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_115675488_115681424
Isoform_118277_13	chr3	-	2148	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	35	6837	35	-6837	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTAGATTCTGTTAAT	143	False	NA	NA	False	NA	NA	NA	115801020	115739458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
Isoform_118278_55	chr3	-	2014	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	34	6972	34	-6972	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTTTGTAGCCTATT	142	False	NA	62	True	TATAAA	-19	NA	115801021	115739593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
Isoform_118279_26	chr3	-	1901	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	2	7117	2	-7117	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAAAGGTCATGTGTAT	110	False	NA	-83	True	AATATA	-21	NA	115801053	115739738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
Isoform_11828_29	chr11	-	435	4	FSM	ENSMUSG00000078974.11	ENSMUST00000109642.8	691	4	11	245	11	6	multi-exon	FALSE	canonical	3	167	junction_3	2857.39815605425	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATTTTAGTAAAAGATG	NA	False	NA	-32	True	AATAAA	-25	NA	16458155	16451631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458099
Isoform_118283_7	chr3	-	6663	12	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	20	-2309	at_least_one_novel_splicesite	FALSE	non_canonical	2	22	junction_1	28.4456855215934	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTCAGTCCATTTAATG	128	False	NA	NA	False	AATAAA	-16	NA	115801035	115734930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_115737313_115737340_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
Isoform_118284_14	chr3	-	4456	16	FSM	ENSMUSG00000033502.16	ENSMUST00000090464.7	4485	16	28	1	-18	-1	multi-exon	FALSE	canonical	2	9	junction_7	3.61232458243842	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGGGCATTCATTAGT	NA	False	NA	NA	False	AATAAA	-20	NA	116217653	116066202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116068358_116087374_116087736_116088399_116088523_116090779_116090828_116092085_116092199_116101788_116101949_116115730_116115870_116122127_116122359_116126443_116126532_116142102_116142166_116144854_116144922_116160275_116160356_116186470_116186564_116198191_116198268_116216215_116216307_116217085
Isoform_118286_9	chr3	-	1460	11	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	-33	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	93.6707531730155	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGAGCTGCTGCTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	116301747	116282613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298096_116300483_116300628_116301399_116301501_116301593
Isoform_118288_88	chr3	-	1492	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	98	4	23	-4	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGAGCTGCTGCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	116301759	116282615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
Isoform_118289_244	chr3	-	1464	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	127	3	-16	-3	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGAGCTGCTGCTTTT	NA	False	NA	-3	True	AATAAA	-17	NA	116301730	116282614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
Isoform_118291_12	chr3	-	1533	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	59	2	-16	-2	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGAGCTGCTGCTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	116301798	116282613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
Isoform_118292_5	chr3	-	1354	10	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	97.8116103083428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGAGCTGCTGCTTTT	NA	False	NA	-3	True	AATAAA	-17	NA	116301725	116282614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_116282988_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
Isoform_118293_3	chr3	-	1534	11	NIC	ENSMUSG00000033439.13	novel	1723	11	NA	NA	9	-8	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	43.3178946856839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGGATCAATCTGAG	NA	False	NA	NA	False	AATAAA	-13	NA	116388527	116374751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382174_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
Isoform_118294_3	chr3	-	1658	11	FSM	ENSMUSG00000033439.13	ENSMUST00000184963.8	1616	11	-41	-1	10	0	multi-exon	FALSE	canonical	3	22	junction_2	31.2251501197352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCTGAGTGTGAGGCTT	NA	False	NA	NA	False	AATAAA	-23	NA	116388526	116374741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
Isoform_118295_9	chr3	-	2008	12	NIC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	44.0480579022353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTGAGTGTGAGGCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	116388524	116374740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116384053_116384206_116385841_116385909_116386112_116386160_116388287
Isoform_118296_77	chr3	-	1842	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19725	0	-2	0	3prime_fragment	FALSE	canonical	3	87	junction_7	13.8524366087703	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCTGAGTGTGAGGCTT	NA	False	NA	NA	False	AATAAA	-23	NA	116388511	116374741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
Isoform_118300_3	chr3	-	1133	6	NNC	ENSMUSG00000033439.13	novel	459	7	NA	NA	-6	629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	47.6378001171339	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAATCTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116388515	116382587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388288
Isoform_118306_1779	chr3	-	2715	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	63	4	-4	-4	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTTGATCTGTGAG	NA	False	NA	-5	True	AATAAA	-32	NA	116456263	116424816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
Isoform_118309_74	chr3	-	2767	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	11	4	11	-4	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTTGATCTGTGAG	NA	False	NA	-5	True	AATAAA	-32	NA	116456315	116424816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
Isoform_11831_520	chr11	-	424	4	FSM	ENSMUSG00000078974.11	ENSMUST00000166950.8	754	4	328	2	10	-2	multi-exon	FALSE	canonical	3	4864	junction_3	651.205207459386	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTATCAAATTTTAGT	NA	False	NA	-40	True	AATAAA	-17	NA	16458156	16451639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458103
Isoform_118323_59	chr3	-	5053	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	427	245	8	-245	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTATATTTCCATTTT	2223	False	NA	-15	True	CATAAA	-13	NA	116505872	116463363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
Isoform_118324_30	chr3	-	5092	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	379	254	-14	-254	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATATAGTTTTCTATAT	2175	False	NA	-24	True	CATAAA	-4	NA	116505920	116463372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
Isoform_118325_19	chr3	-	5299	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	427	-1	8	1	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGTAGTTCCTCAGGA	2223	False	NA	-8	True	AATAAA	-21	NA	116505872	116463117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
Isoform_118334_11	chr3	-	5090	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-27	4562	-27	-1510	multi-exon	TRUE	canonical	3	13	junction_28	10.2172903022423	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGATCTCTTTTTGGCT	NA	False	NA	NA	False	AAAACA	-6	NA	116601842	116538209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
Isoform_118335_7	chr3	-	2016	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	-7	12	-7	-12	multi-exon	FALSE	canonical	3	21	junction_1	4.05431868505671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTTTCCAAAGTAGG	NA	False	NA	NA	False	AATAAA	-20	NA	117662592	117575307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
Isoform_118336_16	chr3	-	1797	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	-6	230	-6	-6	multi-exon	FALSE	canonical	3	21	junction_1	4.05431868505671	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTGTCTATGATGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	117662591	117575525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
Isoform_118337_6	chr3	-	1868	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	-71	224	-71	0	multi-exon	FALSE	canonical	3	21	junction_1	4.05431868505671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGATGTGTTCATTT	NA	False	NA	NA	False	AATAAA	-20	NA	117662656	117575519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
Isoform_118338_7	chr3	-	1616	8	FSM	ENSMUSG00000028007.14	ENSMUST00000169812.8	1588	8	-34	6	22	-6	multi-exon	FALSE	canonical	3	11	junction_1	6.9045976991969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTGTCTATGATGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	117662563	117575525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_117576026_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
Isoform_118339_14	chr3	-	3086	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	437	254	21	-254	multi-exon	TRUE	canonical	3	41	junction_1	15.6821233920295	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGGAGGTTTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	119577016	119512644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
Isoform_118341_4	chr3	-	3320	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	203	254	90	-254	multi-exon	FALSE	canonical	3	41	junction_1	15.6821233920295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGGAGGTTTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	119577250	119512644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
Isoform_118342_4	chr3	-	3394	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	129	254	16	-254	multi-exon	FALSE	canonical	3	41	junction_1	15.6821233920295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGGAGGTTTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	119577324	119512644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
Isoform_118345_3	chr3	-	3241	14	NIC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	-123	-258	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	23.8597975856545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTTGGGAGGTTTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	119577160	119512648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
Isoform_118346_16	chr3	-	3179	14	FSM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	-69	254	-69	-254	multi-exon	TRUE	canonical	3	41	junction_1	15.6821233920295	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGGAGGTTTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	119577106	119512644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
Isoform_118351_3	chr3	-	3320	14	FSM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	-213	257	90	-257	multi-exon	FALSE	canonical	3	41	junction_1	15.6821233920295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTTGGGAGGTTTGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	119577250	119512647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
Isoform_118354_3	chr3	-	3052	14	NIC	ENSMUSG00000028134.12	novel	3364	14	NA	NA	-11	-257	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	23.8597975856545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTTGGGAGGTTTGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	119576967	119512647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
Isoform_118355_3	chr3	-	3196	13	FSM	ENSMUSG00000028134.12	ENSMUST00000197833.5	1598	13	-277	-1321	-123	-257	multi-exon	FALSE	canonical	3	11	junction_4	23.7888571020598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTTGGGAGGTTTGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	119577160	119512647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
Isoform_118356_30	chr3	-	1039	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	0	445	0	0	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTCATGTTTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	120965344	120949491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
Isoform_118357_16	chr3	-	1475	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	0	9	0	-7	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAAGGACTCTTGTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	120965344	120949055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
Isoform_118359_3	chr3	-	1611	4	FSM	ENSMUSG00000028133.18	ENSMUST00000039761.12	1145	4	-6	-460	-5	-5	multi-exon	FALSE	canonical	3	76	junction_2	14.8548533034381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGGACTCTTGTGTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	120965349	120949053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_120949952_120950049_120950166_120952416_120952905_120965240
Isoform_118361_3	chr3	-	3953	2	NIC	ENSMUSG00000028133.18	novel	1583	3	NA	NA	0	-7	intron_retention	FALSE	canonical	3	77	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAAGGACTCTTGTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	120965344	120949055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_120952905_120965240
Isoform_118362_9	chr3	-	2542	15	FSM	ENSMUSG00000039865.9	ENSMUST00000039197.9	2620	15	78	0	78	0	multi-exon	FALSE	canonical	2	7	junction_10	3.70672307009404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTTGTTCATCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	121325975	121253176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_121253726_121254750_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
Isoform_118363_16	chr3	-	2492	15	FSM	ENSMUSG00000039865.9	ENSMUST00000039197.9	2620	15	128	0	128	0	multi-exon	FALSE	canonical	2	7	junction_10	3.70672307009404	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTTGTTCATCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	121325925	121253176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_121253726_121254750_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
Isoform_118366_247	chr3	-	3361	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	126	2	-10	-2	multi-exon	TRUE	canonical	3	145	junction_14	20.5277981251709	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACATGTGCCTGACCTT	7257	False	NA	-3	True	ATTAAA	-20	NA	121608825	121552557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
Isoform_11837_4	chr11	-	1005	4	FSM	ENSMUSG00000087060.8	ENSMUST00000123734.8	787	4	-55	-163	2	0	multi-exon	FALSE	canonical	3	11	junction_1	8.25967446224258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGAAGGTGTATCGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	16901097	16885158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_16885927_16886454_16886565_16900881_16900931_16901019
Isoform_118373_50	chr3	-	4003	15	NIC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	12.9545910229319	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGTACTTATCTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	122413365	122332369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
Isoform_118376_29	chr3	-	5210	14	FSM	ENSMUSG00000039735.17	ENSMUST00000162409.8	5198	14	-11	-1	-11	1	multi-exon	FALSE	canonical	3	68	junction_7	9.36820759854666	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGTGTACTTATCT	NA	False	NA	-4	True	AATAAA	-19	NA	122413375	122332372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
Isoform_11838_5	chr11	-	544	4	FSM	ENSMUSG00000087060.8	ENSMUST00000123734.8	787	4	-56	299	1	8	multi-exon	FALSE	canonical	3	11	junction_1	8.25967446224258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATTTTGTCTTTGGT	NA	False	NA	NA	False	CATAAA	-36	NA	16901098	16885620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_16885927_16886454_16886565_16900881_16900931_16901019
Isoform_118383_53	chr3	-	5793	16	FSM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	85	307	46	-307	multi-exon	FALSE	canonical	3	36	junction_5	6.61177400971597	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTCTTTTCTTTGCA	NA	False	NA	NA	False	AAAACA	-28	NA	122778074	122725448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
Isoform_11839_6	chr11	-	1535	3	FSM	ENSMUSG00000087060.8	ENSMUST00000130392.8	1540	3	2	3	2	2	multi-exon	FALSE	canonical	3	28	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGGTGTATCGTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	16901097	16885156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_16886565_16900881_16900931_16901019
Isoform_118391_297	chr3	-	2607	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	132	2	9	-2	multi-exon	FALSE	canonical	3	213	junction_2	25.8534330408942	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTGTTTTCCTTA	NA	False	NA	-4	True	AATAAA	-15	NA	123179625	123161947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
Isoform_118397_24	chr3	-	2381	10	NIC	ENSMUSG00000028114.17	novel	2741	11	NA	NA	25	-1	combination_of_known_splicesites	TRUE	canonical	3	34	junction_1	76.5041756304118	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTTTGTTTTCCTTAG	NA	False	NA	-3	True	AATAAA	-16	NA	123179609	123161946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_123163340_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
Isoform_118400_169	chr3	-	376	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	68	4	-3	-1	multi-exon	FALSE	canonical	3	427	junction_1	15.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGACTGTGTCCTGTTTC	NA	False	NA	44	True	AATAAA	-17	NA	123301985	123301204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_123301310_123301465_123301512_123301760
Isoform_118402_6	chr3	-	3541	6	FSM	ENSMUSG00000032854.13	ENSMUST00000057944.12	3740	6	-47	246	-47	-11	multi-exon	FALSE	canonical	3	9	junction_2	3.44093010681705	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAGAAATGTTGTTGG	NA	False	NA	NA	False	AATAAA	-10	NA	125732315	125659165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708286_125709111_125732101
Isoform_118404_3	chr3	-	3787	6	FSM	ENSMUSG00000032854.13	ENSMUST00000057944.12	3740	6	-47	0	-47	0	multi-exon	FALSE	canonical	3	9	junction_2	3.44093010681705	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCTCATTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	125732315	125658919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708286_125709111_125732101
Isoform_118406_5	chr3	-	5749	25	FSM	ENSMUSG00000032826.20	ENSMUST00000044443.15	5775	25	26	0	2	0	multi-exon	FALSE	canonical	2	3	junction_24	9.47034846243791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCAGTGGTGGTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	126792085	126715260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126791972
Isoform_118409_4	chr3	-	8171	45	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	6	junction_43	7.96359874420338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTTGCAGTGGTGGTT	2141	False	NA	-8	True	AATAAA	-13	NA	127202702	126715263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127132780_127132842_127202493
Isoform_118417_1041	chr3	-	2041	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	79	1	-73	-1	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTGGTTTTATTTAC	NA	False	NA	-2	True	AATAAA	-16	NA	127346919	127330363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
Isoform_11842_782	chr11	-	1507	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	34	3	34	-3	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCAGTCTCTTTTTC	NA	False	NA	45	True	AGTAAA	-16	NA	17161534	17153200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
Isoform_118421_18	chr3	-	1983	13	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	175	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	254.560732766597	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127346671	127330364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346640
Isoform_118427_105	chr3	-	784	6	ISM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	3	9771	1	-14	5prime_fragment	FALSE	canonical	3	772	junction_1	64.3011663968858	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCAGGTGAGTGCTTA	NA	False	NA	NA	False	AAAACA	-19	NA	127346995	127340133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
Isoform_11843_332	chr11	-	1555	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	-16	5	-16	-5	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTAGCAGTCTCTTTT	NA	False	NA	43	True	AGTAAA	-14	NA	17161584	17153202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
Isoform_118432_277	chr3	-	2647	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	15	0	15	0	multi-exon	FALSE	canonical	3	416	junction_8	26.3288791357173	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTGCATCATGGCTT	NA	False	NA	-16	True	AATAAA	-16	NA	127631145	127600660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
Isoform_118433_698	chr3	-	2603	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	58	1	58	-1	multi-exon	FALSE	canonical	3	416	junction_8	26.3288791357173	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATATTTGCATCATGGCT	NA	False	NA	-17	True	AATAAA	-15	NA	127631102	127600661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
Isoform_118439_65	chr3	-	2575	9	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	60	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_6	132.051067299738	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATATTTGCATCATGGCT	NA	False	NA	-17	True	AATAAA	-15	NA	127631100	127600661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127616232_127616260_127616913_127616963_127630797
Isoform_118443_20	chr3	-	2551	9	FSM	ENSMUSG00000074238.7	ENSMUST00000200409.5	2580	9	27	2	15	-2	multi-exon	FALSE	canonical	3	8	junction_4	148.476376487979	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCATCATGGCTTCAT	NA	False	NA	-13	True	AATAAA	-19	NA	127631145	127600657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
Isoform_118448_14	chr3	-	2237	3	NIC	ENSMUSG00000074238.7	novel	198	4	NA	NA	39	0	intron_retention	FALSE	canonical	3	416	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	127631121	127614395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_127616260_127616913_127616963_127630797
Isoform_118449_16	chr3	-	1576	2	FSM	ENSMUSG00000050549.9	ENSMUST00000199273.2	2234	2	22	636	-14	-14	multi-exon	FALSE	canonical	3	68	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAAATGACTTTGA	2596	False	NA	NA	False	AATACA	-6	NA	127689951	127663342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_127664650_127689682
Isoform_118463_756	chr3	-	1025	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	241	5	205	-1	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACGTTTATTGAACGGA	NA	False	NA	-6	True	AATAAA	-17	NA	129624804	129618565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
Isoform_118464_160	chr3	-	1228	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	38	5	2	-1	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACGTTTATTGAACGGA	NA	False	NA	-6	True	AATAAA	-17	NA	129625007	129618565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
Isoform_118469_234	chr3	-	4643	25	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	36	259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	37.0104855637786	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGGTGGTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	129854520	129776832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129834444_129834467_129835097_129854217
Isoform_118470_64	chr3	-	5091	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	36	1	36	-1	multi-exon	FALSE	canonical	3	129	junction_20	16.4228159792433	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGGAGTGCAATTTTAT	NA	False	NA	-1	True	TATAAA	-21	NA	129854520	129776408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
Isoform_118471_20	chr3	-	4870	25	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	229	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	37.0104855637786	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGTGGAGTGCAATT	NA	False	NA	-5	True	TATAAA	-17	NA	129854327	129776412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129834444_129834467_129835097_129854217
Isoform_118474_5	chr3	-	4724	25	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	-42	262	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	37.0104855637786	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGGTGGTTTGTTTGT	NA	False	NA	-2	True	ATTAAA	-19	NA	129854598	129776829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129834444_129834467_129835097_129854217
Isoform_118475_32	chr3	-	4563	23	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	36	260	combination_of_known_junctions	FALSE	canonical	3	42	junction_20	30.141162376748	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGGTGGTTTGTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	129854520	129776831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322_129835097_129854217
Isoform_118477_10	chr3	-	4949	24	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	50	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_22	44.4776021031584	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGAGTGCAATTTTATT	NA	False	NA	0	True	TATAAA	-22	NA	129854506	129776407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322_129834444_129834467_129835097_129854217
Isoform_118480_1459	chr3	-	1039	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	20	8	-8	-1	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	1459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAGAGTGTGGACTT	NA	False	NA	-7	True	AATAAA	-16	NA	130503073	130489568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
Isoform_118488_332	chr3	-	609	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	16	-1	0	1	multi-exon	FALSE	canonical	3	513	junction_4	3512.03875085398	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTATCTGTGATTTGT	NA	False	NA	-10	True	AATAAA	-21	NA	130523970	130520478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
Isoform_118490_41	chr3	-	534	5	FSM	ENSMUSG00000062006.13	ENSMUST00000196202.5	495	5	0	-39	0	2	multi-exon	FALSE	canonical	3	274	junction_4	3611.9776092883	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGCTTCCGTTATCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	130523970	130520485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523837
Isoform_118491_1121	chr3	-	431	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	56	-7	0	-1	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCGTTATCTGTGATTT	NA	False	NA	-12	True	AATAAA	-19	NA	130523991	130520480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
Isoform_118492_287	chr3	-	466	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	20	-6	20	1	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTCCGTTATCTGTGATT	NA	False	NA	-13	True	AATAAA	-18	NA	130524027	130520481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
Isoform_118503_1478	chr3	-	1725	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	35	29	35	-29	multi-exon	FALSE	canonical	3	722	junction_3	33.5492327841959	1478	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATAAAATCCTTAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	131065715	131027096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
Isoform_118509_4	chr3	-	1689	4	FSM	ENSMUSG00000027983.14	ENSMUST00000200236.2	1716	4	1	26	1	-26	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131096848	131086962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_131087334_131089036_131089199_131091434_131092071_131096328
Isoform_118516_503	chr3	-	1072	7	FSM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	51	3	3	-3	multi-exon	FALSE	canonical	3	854	junction_6	52.4195150259477	503	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTTGCTCATTTT	NA	False	NA	-19	True	AATAAA	-28	NA	132389594	132366262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
Isoform_118524_4	chr3	-	4575	13	FSM	ENSMUSG00000040998.19	ENSMUST00000042729.16	3601	13	-38	-936	-38	-2	multi-exon	FALSE	canonical	2	2	junction_10	2.98491578142872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCCTCTTCCTTGGTT	NA	False	NA	NA	False	AATAAA	-38	NA	132655959	132587507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132637342_132637394_132653807_132653909_132655733
Isoform_118526_7	chr3	-	4497	12	FSM	ENSMUSG00000040998.19	ENSMUST00000042744.16	4619	12	119	3	-12	-3	multi-exon	FALSE	canonical	1	4	junction_10	2.17802700922017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGCCTCTTCCTTGGT	NA	False	NA	NA	False	AATAAA	-37	NA	132655933	132587508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653909_132655733
Isoform_118527_7	chr3	-	4637	12	FSM	ENSMUSG00000040998.19	ENSMUST00000042744.16	4619	12	-18	0	-18	0	multi-exon	FALSE	canonical	1	4	junction_10	2.17802700922017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTCTTCCTTGGTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	132656070	132587505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653909_132655733
Isoform_118530_250	chr3	-	3486	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	16	1	16	-1	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTTTGACTCCTCTCAGA	NA	False	NA	-4	True	NA	NA	NA	132797570	132687513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
Isoform_118545_27	chr3	-	9111	12	FSM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	67	-157	1	1	multi-exon	FALSE	canonical	3	63	junction_5	40.7374175676692	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTATTCTGTTGCAGA	NA	False	NA	-8	True	AATAAA	-21	NA	133250062	133169442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
Isoform_118546_6	chr3	-	8923	11	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-25990	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_5	47.1322607138677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133212433	133169443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133212373
Isoform_118549_51	chr3	-	9108	12	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	35.1295124450667	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTATTCTGTTGCAGA	NA	False	NA	-8	True	AATAAA	-21	NA	133250062	133169442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
Isoform_118550_28	chr3	-	8918	11	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-25988	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_10	41.8946297274484	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133212431	133169443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133212373
Isoform_118551_6	chr3	-	4141	7	ISM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	69	15219	3	-2	5prime_fragment	FALSE	canonical	3	102	junction_6	28.6845874217419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	133250060	133184818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
Isoform_118552_4	chr3	-	3963	6	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-25997	-2	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_5	41.9494934415185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	133212440	133184818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133212373
Isoform_118554_3	chr3	-	4407	4	ISM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	76	18516	-6	-3299	5prime_fragment	FALSE	canonical	3	102	junction_3	19.9387952383176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAACAAATTCCCAC	NA	False	NA	NA	False	NA	NA	NA	133250053	133188115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_133189079_133191272_133194479_133219789_133219935_133249960
Isoform_118564_41	chr3	-	773	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	530	2058	9	1542	multi-exon	FALSE	canonical	3	215	junction_1	1	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTATCCTTTGTTCT	NA	False	NA	-23	True	AATACA	-9	NA	135129156	135114230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_135114652_135116771_135116987_135129019
Isoform_118566_4	chr3	-	2924	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	435	2	-83	-2	multi-exon	FALSE	canonical	3	215	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATGTTTTCTTTTTTAT	NA	False	NA	-1	True	ATTAAA	-18	NA	135129251	135112174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_135114652_135116771_135116987_135129019
Isoform_118567_19	chr3	-	2829	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	530	2	9	-2	multi-exon	FALSE	canonical	3	215	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATGTTTTCTTTTTTAT	NA	False	NA	-1	True	ATTAAA	-18	NA	135129156	135112174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_135114652_135116771_135116987_135129019
Isoform_118570_24	chr3	-	1756	7	ISM	ENSMUSG00000028163.18	ENSMUST00000129428.8	2520	13	14025	-226	-17	-1	3prime_fragment	FALSE	canonical	3	48	junction_1	5.39804491356722	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTGATCTCTGCAA	NA	False	NA	-1	True	AATAAA	-24	NA	135300219	135290416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969
Isoform_118574_16	chr3	-	4123	25	FSM	ENSMUSG00000028163.18	ENSMUST00000029812.14	4117	25	-7	1	-6	-1	multi-exon	FALSE	canonical	3	24	junction_17	10.9790678363673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTGATCTCTGCAA	NA	False	NA	-1	True	AATAAA	-24	NA	135397314	135290416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
Isoform_118576_13	chr3	-	3041	9	FSM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	33	9	18	-8	multi-exon	FALSE	canonical	3	16	junction_1	5.49431524395898	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGTACATGTCCAACT	NA	False	NA	NA	False	ATTAAA	-16	NA	137687273	137636776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
Isoform_118579_10	chr3	-	2841	10	NNC	ENSMUSG00000028159.15	novel	3083	9	NA	NA	18	-186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.47641647120907	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCATTGTGTCAAGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	137687273	137636954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_137638262_137638283_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
Isoform_11858_15	chr11	-	3287	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	2	896	2	-896	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	17903873	17889651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
Isoform_118583_158	chr3	-	2631	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	55	0	55	0	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTTTTTCTAGTTGTA	NA	False	NA	-9	True	ATTAAA	-15	NA	138195221	138164716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
Isoform_118584_10	chr3	-	2739	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	-48	-5	-48	5	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTAGTTGTATTTGT	NA	False	NA	-4	True	ATTAAA	-20	NA	138195324	138164711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
Isoform_118585_380	chr3	-	2559	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	131	-4	14	4	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTCTAGTTGTATTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	138195145	138164712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
Isoform_11859_63	chr11	-	2861	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	2	1322	2	-1322	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCTTTTCAGAGATGT	NA	False	NA	NA	False	AATAAA	-21	NA	17903873	17890077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
Isoform_118594_18	chr3	-	3686	15	FSM	ENSMUSG00000028149.13	ENSMUST00000196280.5	3598	15	-88	0	-24	0	multi-exon	FALSE	canonical	3	17	junction_4	20.5834538265222	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGATTACTTGGTTTCT	NA	False	NA	-6	True	AATAAA	-21	NA	138780986	138631666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661220_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
Isoform_118596_10	chr3	-	3540	14	NIC	ENSMUSG00000028149.13	novel	3598	15	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	23.9889027598451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138780986	138631665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661220_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
Isoform_118598_141	chr3	-	3703	15	FSM	ENSMUSG00000028149.13	ENSMUST00000098574.9	3669	15	-37	3	-37	1	multi-exon	FALSE	canonical	3	58	junction_10	10.7892614791424	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138780999	138631665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
Isoform_118599_46	chr3	-	3542	14	FSM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	-154	-5	-23	1	multi-exon	FALSE	canonical	3	34	junction_10	15.970386796752	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138780985	138631665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
Isoform_118601_5	chr3	-	3752	16	NNC	ENSMUSG00000028149.13	novel	3669	15	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.2960210075331	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGAGATTACTTGGTT	NA	False	NA	-9	True	AATAAA	-18	NA	138780984	138631669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138675668_138675737_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
Isoform_118604_8	chr3	-	4988	13	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	27	2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	54.6671747943864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCTGGCCTTTTTTTT	7030	False	NA	-2	True	AATAAA	-21	NA	142101427	141945348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983760_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
Isoform_118608_51	chr3	-	4667	13	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	27	5	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	45.7355775688419	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGCCTTTTTTTTTCC	7030	False	NA	1	True	AATAAA	-24	NA	142101427	141945345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142017976_142020166_142020210_142058494_142058647_142097473_142097612_142101346
Isoform_118614_213	chr3	-	4989	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	27	0	27	0	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACGCCTGGCCTTTTTT	7030	False	NA	-4	True	AATAAA	-19	NA	142101427	141945350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
Isoform_118615_19	chr3	-	5033	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	-15	-2	-12	2	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCTGGCCTTTTTTTT	6988	False	NA	-2	True	AATAAA	-21	NA	142101469	141945348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
Isoform_11863_5	chr11	-	3204	13	FSM	ENSMUSG00000020160.19	ENSMUST00000068264.14	3196	13	-30	22	-3	-9	multi-exon	FALSE	canonical	0	0	junction_7	0.897527467855751	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAGGACTGGAAAGATG	NA	False	NA	NA	False	AATAAA	-8	NA	18968988	18830683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
Isoform_118637_501	chr3	-	5576	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	15	616	1	-616	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGTTTTAAGTTTTC	NA	False	NA	-2	True	NA	NA	NA	142587750	142497278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
Isoform_118649_44	chr3	-	1713	7	ISM	ENSMUSG00000004591.17	ENSMUST00000172521.8	2510	16	1	16516	1	4	5prime_fragment	FALSE	canonical	3	467	junction_2	29.0975371237269	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTGAATATCACTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	142587750	142527065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
Isoform_118659_11	chr3	-	1628	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	36	5	-4	-5	multi-exon	FALSE	canonical	3	21	junction_4	8.32165848854662	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTTTGGGTTTAAACG	NA	False	NA	-6	True	AATAAA	-23	NA	143910945	143894295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
Isoform_118663_73	chr3	-	2480	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-40	3737	-40	-3737	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTATTTCTCGTTTAA	NA	False	NA	-7	True	AGTAAA	-22	NA	144275982	144139203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_118666_4	chr3	-	2531	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-99	3745	-99	-3745	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCTATTCTGGTATTTC	NA	False	NA	-15	True	AGTAAA	-14	NA	144276041	144139211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_118669_27	chr3	-	4255	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-39	1961	-39	-1961	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAATGTGTGTGTGTGT	NA	False	NA	NA	False	AGTAAA	-31	NA	144275981	144137427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_118678_6	chr3	-	6158	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	23	-4	0	4	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGTAGTATGCGCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	144275919	144135462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_118679_3	chr3	-	4273	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-64	1968	-64	-1968	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGATAATGTCAATGTGTG	NA	False	NA	NA	False	AGTAAA	-24	NA	144276006	144137434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_118683_15	chr3	-	3974	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-12	-1	-12	1	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	AAAACA	-21	NA	144426108	144394603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
Isoform_118684_48	chr3	-	1780	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-42	2223	-42	279	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTGACTCATTTATTA	NA	False	NA	-3	True	AATAAA	-15	NA	144426138	144396827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
Isoform_118686_212	chr3	-	1749	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-11	2223	-11	279	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTGACTCATTTATTA	NA	False	NA	-3	True	AATAAA	-15	NA	144426107	144396827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
Isoform_118695_19	chr3	-	5879	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	14	-1932	2	-1	multi-exon	TRUE	canonical	3	282	junction_5	25.8444868395563	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCTGCTAGCTCTTTG	NA	False	NA	-11	True	AATAAA	-15	NA	144426082	144392672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
Isoform_118704_108	chr3	-	2021	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	0	-2	0	2	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTATGTTGTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	145355736	145352728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
Isoform_118705_21	chr3	-	2047	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	-31	3	-31	-3	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATCTGAATGTATGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	145355767	145352733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
Isoform_118707_519	chr3	-	1252	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	18	391	0	-3	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTTAGGTATTAAAG	NA	False	NA	-6	True	AATAAA	-22	NA	146227166	146212101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
Isoform_118709_10	chr3	-	2788	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	17	-1144	-1	1144	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTAACGATCCTTTGAA	NA	False	NA	NA	False	AATAAA	-27	NA	146227167	146210566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
Isoform_118712_8	chr3	-	1425	5	FSM	ENSMUSG00000028187.11	ENSMUST00000199079.2	1978	5	-1	554	-1	-554	multi-exon	FALSE	canonical	3	522	junction_4	35.3765459026175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTACAAGCTTTCAT	NA	False	NA	NA	False	AATAAA	-22	NA	146227167	146217103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
Isoform_118716_92	chr3	-	4367	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	-25	5	5	-5	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTATTGAGTCTTCT	2673	False	NA	NA	False	ATTAAA	-15	NA	146518740	146435333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
Isoform_118717_282	chr3	-	4338	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	1	8	1	-8	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAAAGCTATTGAGTCT	2699	False	NA	NA	False	ATTAAA	-12	NA	146518714	146435336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
Isoform_118722_5	chr3	-	5209	20	NNC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	525	-332	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	6.88488649506014	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTGTGTCGAGCTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	148695666	148522060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148695518
Isoform_118723_5	chr3	-	5791	20	NNC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	510	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	6.88488649506014	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTAACGTGCACTTTTAT	NA	False	NA	-3	True	AATAAA	-16	NA	148695681	148521493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148695518
Isoform_118725_9	chr3	-	1352	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	240	4	-240	-2	multi-exon	FALSE	canonical	3	17	junction_3	6.40624695121879	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTTTGTGGGTATTTT	NA	False	NA	NA	False	CATAAA	-13	NA	151871627	151799479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
Isoform_118728_12	chr3	-	2376	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	-32	115	-32	-115	multi-exon	FALSE	canonical	3	8	junction_3	4.18993502999218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTACTGTCTTCTG	NA	False	NA	NA	False	AATATA	-10	NA	151915752	151889733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
Isoform_118729_4	chr3	-	2490	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	-34	3	-34	-3	multi-exon	TRUE	canonical	3	8	junction_3	4.18993502999218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCCTATAGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	151915754	151889621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
Isoform_118730_4	chr3	-	2424	4	NIC	ENSMUSG00000028035.14	novel	2459	4	NA	NA	-32	-113	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	6.48074069840786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTACTGTCTTCTGTT	NA	False	NA	NA	False	AATATA	-12	NA	151915752	151889731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_151891018_151892051_151892621_151899013_151899302_151915471
Isoform_118731_4	chr3	-	2134	3	NIC	ENSMUSG00000028035.14	novel	2459	4	NA	NA	-32	-115	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTACTGTCTTCTG	NA	False	NA	NA	False	AATATA	-10	NA	151915752	151889733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_151891018_151892051_151892621_151915471
Isoform_118739_224	chr3	-	4934	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	35	-4	1	4	multi-exon	FALSE	canonical	3	131	junction_7	24.7194030852059	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTTAATGACTGTCA	NA	False	NA	-30	True	AATAAA	-17	NA	152046009	151979481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_11874_941	chr11	-	3602	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	28	1	-18	-1	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	941	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAATTTTGTCTTTTTC	1364	False	NA	-5	True	AATAAA	-18	NA	20062885	20012304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
Isoform_118740_83	chr3	-	4967	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	11	-13	9	13	multi-exon	FALSE	canonical	3	131	junction_7	24.7194030852059	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTCACTTTGTTCT	NA	False	NA	-21	True	AATAAA	-26	NA	152046033	151979472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_118743_8	chr3	-	5329	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	24	-388	0	388	multi-exon	TRUE	canonical	3	131	junction_7	24.7194030852059	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCAGGCTTCTTGCTT	NA	False	NA	NA	False	AATAAA	-38	NA	152046020	151979097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_118746_9	chr3	-	4747	14	FSM	ENSMUSG00000054942.14	ENSMUST00000068243.11	2689	14	37	-2095	5	13	multi-exon	FALSE	canonical	1	3	junction_6	50.9351600816605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTCACTTTGTTCT	NA	False	NA	-21	True	AATAAA	-26	NA	152046005	151979472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_118748_13	chr3	-	4844	15	NIC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	6	4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	48.8133157644343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTTAATGACTGTCA	NA	False	NA	-30	True	AATAAA	-17	NA	152046036	151979481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_151982491_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_118749_83	chr3	-	1703	6	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	-13	38370	9	11448	5prime_fragment	FALSE	canonical	3	188	junction_4	9.69535971483266	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCTTAACTGTGGGCT	NA	False	NA	1	True	NA	NA	NA	152046033	152025583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_118750_7	chr3	-	1636	5	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	-39	40069	-15	9749	5prime_fragment	FALSE	canonical	3	188	junction_3	9.28708781050335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGAGTATTATTCTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	152046059	152027282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_118751_183	chr3	-	2935	5	FSM	ENSMUSG00000052544.10	ENSMUST00000200397.5	8169	5	32	5202	-29	1898	multi-exon	FALSE	canonical	3	78	junction_2	13.3674043852949	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGCGTTGTTTTCTCT	NA	False	NA	-5	True	AATAAA	-23	NA	153430779	152909104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_152911229_152912254_152912363_153117098_153117509_153214939_153215135_153430681
Isoform_118752_4	chr3	-	2751	4	NIC	ENSMUSG00000052544.10	novel	8169	5	NA	NA	22	1899	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	46.5403051128804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	153430789	152909103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_152911229_152912254_152912363_153117098_153117509_153430681
Isoform_118753_40	chr3	-	2351	3	NNC	ENSMUSG00000052544.10	novel	416	3	NA	NA	-134273	1898	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	46	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGCGTTGTTTTCTCT	NA	False	NA	-5	True	AATAAA	-23	NA	153065693	152909104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_152911229_152912254_152912363_153065574
Isoform_118754_7	chr3	-	785	2	ISM	ENSMUSG00000052544.10	ENSMUST00000200397.5	8169	5	-4	310581	-4	30	5prime_fragment	FALSE	canonical	3	96	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153430815	153214483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_153215135_153430681
Isoform_118759_12	chr3	-	2080	8	ISM	ENSMUSG00000038975.15	ENSMUST00000196266.5	1271	9	392	-165	344	0	3prime_fragment	FALSE	canonical	3	426	junction_3	214.481719881358	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	7420	False	NA	-2	True	AATAAA	-15	NA	153617326	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327
Isoform_118760_22	chr3	-	2301	9	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000196266.5	1271	9	-865	-165	9	0	multi-exon	FALSE	canonical	3	426	junction_3	203.564140690348	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6163	False	NA	-2	True	AATAAA	-15	NA	153618583	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
Isoform_118761_86	chr3	-	1559	9	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000196266.5	1271	9	-123	-165	0	0	multi-exon	FALSE	canonical	3	426	junction_3	203.564140690348	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6905	False	NA	-2	True	AATAAA	-15	NA	153617841	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
Isoform_118765_20	chr3	-	1419	10	FSM	ENSMUSG00000038975.15	ENSMUST00000198350.5	1399	10	-19	-1	9	-1	multi-exon	FALSE	canonical	3	72	junction_9	303.195735987477	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTGTGTATATAGCTT	6163	False	NA	-3	True	AATAAA	-45	NA	153618583	153612926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
Isoform_118767_15	chr3	-	1468	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	240.631627694519	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6097	False	NA	0	True	AATAAA	-17	NA	153618649	153612923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_118768_47	chr3	-	1406	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	240.631627694519	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	-2	True	AATAAA	-15	NA	153618589	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_118776_16	chr3	-	1460	8	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000196956.5	1055	8	-122	-283	1	0	multi-exon	FALSE	canonical	3	355	junction_5	265.52827590696	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6906	False	NA	-2	True	AATAAA	-15	NA	153617840	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561
Isoform_118780_9	chr3	-	2093	8	ISM	ENSMUSG00000038975.15	ENSMUST00000200209.5	1169	9	392	-280	344	1	3prime_fragment	FALSE	canonical	3	607	junction_3	174.269671392778	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTTGTGTATATAGC	7420	False	NA	-5	True	AATAAA	-43	NA	153617326	153612928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327
Isoform_118783_65	chr3	-	1575	9	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000200209.5	1169	9	-123	-283	0	0	multi-exon	FALSE	canonical	3	607	junction_3	165.057565715722	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6905	False	NA	-2	True	AATAAA	-15	NA	153617841	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
Isoform_118786_10	chr3	-	2317	9	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000200209.5	1169	9	-865	-283	9	0	multi-exon	FALSE	canonical	3	607	junction_3	165.057565715722	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6163	False	NA	-2	True	AATAAA	-15	NA	153618583	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
Isoform_118788_21	chr3	-	1436	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_9	287.574145028528	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6163	False	NA	-2	True	AATAAA	-15	NA	153618583	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
Isoform_118789_54	chr3	-	1423	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTATATAGCTTTT	6157	False	NA	-1	True	AATAAA	-16	NA	153618589	153612924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_118792_14	chr3	-	1483	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6096	False	NA	-2	True	AATAAA	-15	NA	153618650	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_118798_87	chr3	-	1324	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	57	0	3	0	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	-2	True	AATAAA	-15	NA	153618589	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_118801_41	chr3	-	1358	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	23	0	7	0	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6123	False	NA	-2	True	AATAAA	-15	NA	153618623	153612925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_118811_975	chr3	-	1859	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	188	0	2	0	multi-exon	TRUE	canonical	3	875	junction_11	59.2580851965116	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	180	False	NA	-6	True	AATAAA	-16	NA	153650081	153627993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
Isoform_118812_523	chr3	-	1901	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	146	0	-19	0	multi-exon	FALSE	canonical	3	875	junction_11	59.2580851965116	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	138	False	NA	-6	True	AATAAA	-16	NA	153650123	153627993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
Isoform_118813_22	chr3	-	2063	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	-18	2	-18	-2	multi-exon	FALSE	canonical	3	875	junction_11	59.2580851965116	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCTCTGACTCTCCA	NA	False	NA	-8	True	AATAAA	-14	NA	153650287	153627995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
Isoform_118818_44	chr3	-	1964	11	NIC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	875	junction_10	61.0908340096941	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	178	False	NA	-6	True	AATAAA	-16	NA	153650083	153627993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644805_153647519_153647608_153650032
Isoform_118823_3	chr3	-	1791	8	ISM	ENSMUSG00000096225.8	ENSMUST00000177846.8	2076	9	2114	1	89	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	3.13635691430002	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTGCCCACTTCTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	154034182	154011931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_154012643_154017176_154017361_154022379_154022476_154027263_154027368_154027877_154028099_154030178_154030301_154033641_154033804_154033991
Isoform_118824_26	chr3	-	4352	7	NNC	ENSMUSG00000047583.10	novel	4490	6	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.2234458831902	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGTTCTGTTGCAG	NA	False	NA	2	True	AATAAA	-20	NA	154302717	154282156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_154282746_154282779_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
Isoform_118826_47	chr3	-	1082	6	FSM	ENSMUSG00000047583.10	ENSMUST00000052774.8	4490	6	-8	3416	1	-2	multi-exon	FALSE	canonical	3	59	junction_2	5.35163526410386	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATGTCAAATAGGAAA	NA	False	NA	-17	True	AATAAA	-19	NA	154302740	154285483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
Isoform_118829_5	chr3	-	3982	6	NNC	ENSMUSG00000047583.10	novel	488	4	NA	NA	27	3501	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3744406335545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGAGTCTGTTTGCAGC	NA	False	NA	NA	False	AATAAA	-19	NA	154302705	154289690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_154292913_154292955_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
Isoform_11883_8	chr11	-	386	2	NNC	ENSMUSG00000085035.2	novel	627	2	NA	NA	-7320	188	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTCTTGGCCTCCATT	9236	False	NA	NA	False	NA	NA	NA	20103664	20095378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_20095695_20103594
Isoform_118830_3	chr3	-	3847	4	FSM	ENSMUSG00000053870.8	ENSMUST00000194095.2	875	4	-169	-2803	2	2	multi-exon	FALSE	canonical	3	7	junction_3	10.0332779621949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTTTTGTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	154799003	154790552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798571
Isoform_118831_5	chr3	-	3691	4	FSM	ENSMUSG00000053870.8	ENSMUST00000194095.2	875	4	-17	-2799	13	-2	multi-exon	FALSE	canonical	3	7	junction_3	10.0332779621949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGAAATTTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	154798851	154790556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798571
Isoform_118833_39	chr3	-	3478	4	FSM	ENSMUSG00000053870.8	ENSMUST00000066568.6	3518	4	38	2	3	-2	multi-exon	FALSE	canonical	3	25	junction_3	2.16024689946929	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGAAATTTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	154799002	154790556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798935
Isoform_118839_1706	chr3	-	1799	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	16	0	-10	0	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	1706	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTGATCCTACTTT	NA	False	NA	-16	True	AATAAA	-18	NA	157630698	157599884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
Isoform_11885_9	chr11	-	2588	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	-27	2243	-16	-2243	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAATTATGTGGCTTTA	3028	False	NA	-62	True	NA	NA	NA	20199445	20179279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_118864_396	chr3	-	2648	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	5	1	-1	-1	multi-exon	FALSE	canonical	3	573	junction_1	36.7913482463625	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGCTTCTGTAGAGCT	NA	False	NA	-28	True	AATAAA	-16	NA	157737398	157716556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
Isoform_118865_17	chr3	-	3101	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	-1	-446	-1	0	multi-exon	TRUE	canonical	3	573	junction_1	36.7913482463625	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAGTAACTTTTTAAA	NA	False	NA	0	True	ATTAAA	-38	NA	157737404	157716109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
Isoform_11887_21	chr11	-	5424	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	3	-623	3	623	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCTAGCGTTCATGT	3058	False	NA	NA	False	AATAAA	-20	NA	20199415	20176413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_118870_286	chr3	-	2601	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	58	447	15	-1	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGCTTCTGTAGAGCT	NA	False	NA	-28	True	AATAAA	-16	NA	157742218	157716556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
Isoform_118872_104	chr3	-	2647	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	12	447	-12	-1	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGCTTCTGTAGAGCT	NA	False	NA	-28	True	AATAAA	-16	NA	157742264	157716556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
Isoform_118884_41	chr3	-	2653	12	ISM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	4806	-949	9	-1	3prime_fragment	FALSE	canonical	3	86	junction_3	163.435887295901	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGCTTCTGTAGAGCT	NA	False	NA	-28	True	AATAAA	-16	NA	157737382	157716556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
Isoform_118886_59	chr3	-	2645	13	FSM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	-54	-948	1	-2	multi-exon	FALSE	canonical	3	86	junction_3	173.80710492446	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742242	157716557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
Isoform_11889_53	chr11	-	5104	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	48	-348	13	348	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAGTTTAATATTTTA	3103	False	NA	NA	False	AATAAA	-18	NA	20199370	20176688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_118896_192	chr3	-	1017	9	ISM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	-55	4453	0	0	5prime_fragment	FALSE	canonical	3	316	junction_8	116.256115430544	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTGTGCAAAGCAGA	NA	False	NA	-2	True	NA	NA	NA	157742243	157721958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
Isoform_118905_3	chr3	-	3120	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20568	2279	intron_retention	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATATGGTGTTTCTATC	NA	False	NA	NA	False	AATAAA	-18	NA	103126859	103103262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_103106316_103126792
Isoform_118907_12	chr3	-	2412	7	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	3	-3742	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	40.4831926716371	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATTCTGGTATTTCTCG	NA	False	NA	-12	True	AGTAAA	-17	NA	144275916	144139208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_144140479_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_118908_10	chr3	-	2466	7	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-25	-3739	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	40.4831926716371	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGGTATTTCTCGTTT	NA	False	NA	-9	True	AGTAAA	-20	NA	144275967	144139205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_144140479_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_118909_3	chr3	-	2945	7	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-39	-3274	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	40.4831926716371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATCTTCTCAGTGTTT	NA	False	NA	NA	False	TATAAA	-12	NA	144275981	144138740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_144140479_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_118910_21	chr3	-	1205	4	Fusion	ENSMUSG00000105260.2_ENSMUSG00000097639.3	novel	504	2	NA	NA	0	-5	multi-exon	FALSE	canonical	3	17	junction_1	26.5455583227527	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGCAAGCTCTCCTT	NA	False	NA	-15	True	AGTAAA	-11	NA	41447627	41432016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_-_41432596_41436231_41436380_41436506_41436880_41447522
Isoform_118913_6	chr3	-	3841	9	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	16	-2614	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	62.8190606026547	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGCCTGCTGAGTCATT	NA	False	NA	NA	False	NA	NA	NA	132797570	132707205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_132709263_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
Isoform_118917_15	chr3	-	450	2	Antisense	novelGene_ENSMUSG00000048332.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	53026127	53020955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_53021169_53025890
Isoform_118918_10	chr3	-	3571	23	NNC	ENSMUSG00000033222.17	novel	4544	17	NA	NA	-8	1084	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.1931984608806	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCAGTTTGTTCGTGTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	100876987	100848086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_100848362_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
Isoform_118920_3	chr3	-	354	2	Antisense	novelGene_ENSMUSG00000007379.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTTTGTGAAAATCTA	NA	False	NA	NA	False	AATAAA	-15	NA	103029341	103026115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_103026360_103029231
Isoform_118921_3	chr3	-	168	2	Antisense	novelGene_ENSMUSG00000085655.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGCCACTGTCATGA	NA	False	NA	NA	False	NA	NA	NA	36012892	36011303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_36011429_36012849
Isoform_118923_9	chr3	-	834	2	NNC	ENSMUSG00000028126.17	novel	724	2	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCAGCT	1243	False	NA	NA	False	AATAAA	-20	NA	95014196	95004366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_95004691_95013686
Isoform_118924_4	chr3	-	1066	4	Fusion	ENSMUSG00000010538.15_ENSMUSG00000103766.6	novel	600	2	NA	NA	-16	-1701	multi-exon	FALSE	canonical	2	5	junction_1	81.9878039710785	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAGAA	NA	False	NA	NA	False	AATAAA	-14	NA	88204161	88191767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_-_88192623_88194404_88194525_88202697_88202758_88204130
Isoform_118925_3	chr3	-	1010	6	Fusion	ENSMUSG00000105260.2_ENSMUSG00000097639.3	novel	504	2	NA	NA	-1	3044	multi-exon	FALSE	canonical	1	2	junction_1	30.4735951275855	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAGAATACAATTCCAT	NA	False	NA	NA	False	AATAAA	-17	NA	41447628	41428967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_-_41429151_41429734_41429830_41430066_41430172_41436231_41436380_41436506_41436880_41447522
Isoform_118929_12	chr3	+	2967	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	127.207521790183	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_11893_115	chr11	-	2173	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3053	False	NA	-8	True	AATAAA	-17	NA	20199420	20188385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_118931_26	chr3	+	2933	26	NNC	ENSMUSG00000027751.14	novel	682	10	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	117.502789754116	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600309	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_11894_8	chr11	-	2776	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	-24	-581	-13	581	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	3031	False	NA	NA	False	NA	NA	NA	20199442	20187804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_118942_235	chr3	+	3215	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	1	76	1	-76	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTGCTTGTTATGTT	NA	False	NA	-66	True	AATAAA	-13	NA	7568543	7618820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
Isoform_118945_30	chr3	+	3337	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	-46	1	-46	-1	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTCTTTTTTTTCTTG	NA	False	NA	9	True	NA	NA	NA	7568496	7618895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
Isoform_118947_13	chr3	+	3110	8	NIC	ENSMUSG00000043542.13	novel	3292	9	NA	NA	0	-82	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	66.9154202660923	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAAACTGCTGCTTGT	NA	False	NA	-72	True	AATAAA	-7	NA	7568542	7618814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7604135_7604244_7616442
Isoform_118948_373	chr3	+	1889	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	183	1	28	-1	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGGTTTGGTCTGGTCT	NA	False	NA	22	True	AATAAA	-22	NA	8574602	8626665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
Isoform_11895_181	chr11	-	2783	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	6	-1	-5	0	multi-exon	FALSE	canonical	3	111	junction_1	11	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3050	False	NA	-8	True	AATAAA	-17	NA	20199423	20188385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20190699_20191885_20192239_20199306
Isoform_118951_770	chr3	+	792	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	177	1104	22	-1073	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGCTTGATGTTTAA	NA	False	NA	22	True	NA	NA	NA	8574596	8625562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
Isoform_118954_35	chr3	+	830	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	139	1104	-16	-1073	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGCTTGATGTTTAA	NA	False	NA	22	True	NA	NA	NA	8574558	8625562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
Isoform_118957_33	chr3	+	995	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	-26	1104	-26	-1073	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGCTTGATGTTTAA	NA	False	NA	22	True	NA	NA	NA	8574393	8625562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
Isoform_118959_32	chr3	+	903	6	NIC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	103	junction_5	694.848357557244	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGGTTTGGTCTGGTCT	NA	False	NA	22	True	AATAAA	-22	NA	8574586	8626665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325_8625397_8626398
Isoform_11896_8	chr11	-	3326	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	44	-582	-2	581	multi-exon	FALSE	canonical	3	111	junction_1	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	3088	False	NA	NA	False	NA	NA	NA	20199385	20187804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20190699_20191885_20192239_20199306
Isoform_118969_13	chr3	+	7449	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	-37	2	-37	-2	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTTCTGGCTTTGTGA	NA	False	NA	NA	False	TATAAA	-14	NA	9315624	9350391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
Isoform_118974_736	chr3	+	678	4	FSM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	41	268	-16	4	multi-exon	FALSE	canonical	3	202	junction_1	88.411914732499	736	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGTGTGTGGGTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	10077648	10081399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_10077779_10080030_10080204_10080531_10080634_10081126
Isoform_118981_117	chr3	+	1208	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	42	4938	-9	-4938	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTCTAGTGAGTCTATG	NA	False	NA	9	True	AATAAA	-18	NA	10432008	10455459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
Isoform_118984_7	chr3	+	881	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	17	5290	17	-5290	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTAGCAGAGACCTGTT	NA	False	NA	11	True	CATAAA	-18	NA	10431983	10455107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
Isoform_118986_7	chr3	+	1270	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	2	4916	2	-4916	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGTTTCAGTTGAGTT	NA	False	NA	31	True	AATAAA	-40	NA	10431968	10455481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
Isoform_118990_13	chr3	+	6141	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	53	-6	2	6	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTATTTCTTTTTCTTT	NA	False	NA	7	True	ATTAAA	-22	NA	10432019	10460403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
Isoform_118993_6	chr3	+	3348	19	FSM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	-13	56	-12	-56	multi-exon	FALSE	canonical	2	8	junction_6	18.5947689444845	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGGAGCTATCATAATAA	NA	False	NA	NA	False	AATAAA	-19	NA	14598870	14631107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
Isoform_118997_9	chr3	+	3370	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	39	2229	-17	-31	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAAGCACTTTTCGTGTC	NA	False	NA	NA	False	AATAAA	-44	NA	14598921	14631132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
Isoform_119000_3	chr3	+	3277	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	-12	2373	-12	-175	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGCTGTGACTGTGAA	NA	False	NA	NA	False	ATTAAA	-14	NA	14598870	14630988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
Isoform_119001_7	chr3	+	3712	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	32	1894	-24	1	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATTGTCTGATCTAGA	NA	False	NA	NA	False	ATTAAA	-20	NA	14598914	14631467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
Isoform_119002_6	chr3	+	5606	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	32	0	-24	0	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATCATTTCTATGT	NA	False	NA	20	True	AATAAA	-20	NA	14598914	14633361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
Isoform_119004_3	chr3	+	3756	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	-12	1894	-12	1	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATTGTCTGATCTAGA	NA	False	NA	NA	False	ATTAAA	-20	NA	14598870	14631467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
Isoform_119007_9	chr3	+	3334	19	FSM	ENSMUSG00000027550.15	ENSMUST00000108370.9	3359	19	23	2	-12	-2	multi-exon	FALSE	canonical	2	3	junction_18	19.4050394371038	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACAGTTTTCTCTCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	14598870	14637716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14637463
Isoform_119008_5	chr3	+	2640	2	NIC	ENSMUSG00000027550.15	novel	1518	10	NA	NA	24	-14717	intron_retention	FALSE	canonical	3	64	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAGTGAGGAAAACCTA	NA	False	NA	NA	False	AATGAA	-37	NA	14598907	14601816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_14601265_14601533
Isoform_119010_5	chr3	+	1760	8	NNC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	75.6598186837988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTGATCTTTGGGGG	1939	False	NA	24	True	AATAAA	-17	NA	14643717	14671363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_14644084_14652369_14652480_14653199_14653363_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
Isoform_119011_4	chr3	+	808	5	ISM	ENSMUSG00000027552.15	ENSMUST00000029069.13	1779	8	15	3538	-15	-3537	5prime_fragment	FALSE	canonical	2	153	junction_3	26.8607520371266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCTA	1937	False	NA	NA	False	NA	NA	NA	14643715	14667831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666062_14666107_14667707
Isoform_119012_237	chr3	+	1757	8	FSM	ENSMUSG00000027552.15	ENSMUST00000029069.13	1779	8	15	7	-15	-6	multi-exon	FALSE	canonical	2	153	junction_3	25.3191868844518	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTATTGATCTTTGGGG	1937	False	NA	23	True	AATAAA	-16	NA	14643715	14671362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666062_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
Isoform_119015_3	chr3	+	2076	8	FSM	ENSMUSG00000027552.15	ENSMUST00000029069.13	1779	8	15	-312	-15	312	multi-exon	FALSE	canonical	2	153	junction_3	25.3191868844518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGTAGAATCATTGTAT	1937	False	NA	NA	False	AATAAA	-14	NA	14643715	14671681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666062_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
Isoform_119018_6	chr3	+	1847	9	NNC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	86.9079074365503	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTGATCTTTGGGGGA	1920	False	NA	25	True	AATAAA	-18	NA	14643698	14671364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_14644084_14646195_14646267_14652369_14652480_14653199_14653362_14666062_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
Isoform_119019_86	chr3	+	1086	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	23	1190	23	-1190	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCCTTCCTGACAATAA	2202	False	NA	14	True	ATTAAA	-19	NA	14706809	14726872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
Isoform_119021_4	chr3	+	1154	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	-51	1196	-51	-1196	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTTCAGCCTTCCTGA	2128	False	NA	8	True	ATTAAA	-13	NA	14706735	14726866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
Isoform_119022_23	chr3	+	1666	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	23	610	23	-610	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCCTAAGCCATTCAT	2202	False	NA	NA	False	ATTAAA	-21	NA	14706809	14727452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
Isoform_119023_16	chr3	+	2277	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	23	-1	23	1	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCTTTTGGAAGATT	2202	False	NA	NA	False	AATAAA	-16	NA	14706809	14728063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
Isoform_119026_15	chr3	+	1762	8	NIC	ENSMUSG00000027562.13	novel	1788	7	NA	NA	-58	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	37.7661980385333	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGTGCCTGATTGTC	NA	False	NA	10	True	AATAAA	-13	NA	14951274	14965829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_14951432_14951669_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
Isoform_119031_15	chr3	+	1927	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	-139	0	16	0	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951348	14965830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
Isoform_119032_90	chr3	+	1525	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	263	0	52	0	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951750	14965830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
Isoform_119035_18	chr3	+	1772	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	14	2	14	-2	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGGGTGCCTGATTGT	NA	False	NA	9	True	AATAAA	-12	NA	14951501	14965828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
Isoform_11904_201	chr11	-	3942	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-42	26	-42	-1	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTAACGTGTTTTT	7719	False	NA	-6	True	NA	NA	NA	20282755	20252205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
Isoform_119046_26	chr3	+	5239	6	FSM	ENSMUSG00000047213.15	ENSMUST00000191774.6	3196	6	-13	-2030	11	-1	multi-exon	FALSE	canonical	3	57	junction_2	175.937943605125	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTTCTTTCCTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	16237386	16271200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257989_16259589_16268118
Isoform_119047_103	chr3	+	5110	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-1	-180	-1	-2	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	16237398	16271199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
Isoform_119049_71	chr3	+	4459	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-33	503	-9	-503	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16237366	16270516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
Isoform_11905_621	chr11	-	3889	8	FSM	ENSMUSG00000020142.13	ENSMUST00000004634.7	3872	8	-18	1	11	-1	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTAACGTGTTTTT	7772	False	NA	-6	True	NA	NA	NA	20282702	20252205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
Isoform_119051_15	chr3	+	4507	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-81	503	-57	-503	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16237318	16270516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
Isoform_119052_14	chr3	+	5207	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-99	-179	-75	-3	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16237300	16271198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
Isoform_119054_162	chr3	+	5086	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	14	2	-10	-2	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	16237389	16271199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
Isoform_119059_57	chr3	+	5109	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	-9	2	-9	-2	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	16237366	16271199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
Isoform_119066_9	chr3	+	5055	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	192.77620876723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	16237395	16271199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_16237685_16243641_16243728_16257989_16259589_16268118
Isoform_119080_1393	chr3	+	2800	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	143	10	-12	-10	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATTATCTATTTGTA	NA	False	NA	40	True	AATAAA	-26	NA	19242416	19274971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
Isoform_119081_27	chr3	+	2835	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	110	8	-45	-8	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTATCTATTTGTATA	NA	False	NA	42	True	AATAAA	-28	NA	19242383	19274973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
Isoform_119087_25	chr3	+	2848	8	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	-12	-8	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	389.80685955368	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTATCTATTTGTATA	NA	False	NA	42	True	AATAAA	-28	NA	19242416	19274973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269588_19269868_19271343_19271588_19272325_19272486_19273201
Isoform_119090_40	chr3	+	3369	8	NIC	ENSMUSG00000027601.14	novel	904	4	NA	NA	18	-6	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	397.600609780668	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTATTTGTATATT	NA	False	NA	44	True	AATAAA	-30	NA	19242455	19274975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_19243057_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
Isoform_119104_277	chr3	+	4941	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	14	0	5	0	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6952	False	NA	16	True	AATAAA	-20	NA	20111988	20172654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
Isoform_119107_143	chr3	+	3907	26	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_25	37.5784193387641	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6952	False	NA	16	True	AATAAA	-20	NA	20111988	20172654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
Isoform_119109_12	chr3	+	4856	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	1	6	intron_retention	FALSE	canonical	1	1	junction_12	50.0424772309506	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTCTTTGGTGTCACT	6948	False	NA	8	True	AATAAA	-12	NA	20111984	20172646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
Isoform_119114_3	chr3	+	2516	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	-14	5735	-14	280	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCGGCAGTAGTTGGTT	NA	False	NA	17	True	NA	NA	NA	22130801	22265023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_119116_6	chr3	+	6890	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	46	1301	-29	0	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130861	22269457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_119118_6	chr3	+	6706	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	230	1301	1	0	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22131045	22269457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_119119_3	chr3	+	4406	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	-19	3850	-19	-7	multi-exon	TRUE	canonical	3	32	junction_2	67.0932187333414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAATAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	22130796	22266908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_119120_4	chr3	+	6899	17	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	65.5017890977033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130823	22269457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_22131119_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_119122_9	chr3	+	6862	17	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	65.5017890977033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22130859	22269456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_22131119_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_119127_92	chr3	+	6822	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-71	-2542	4	0	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130819	22269457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_119129_21	chr3	+	8136	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-74	-3853	1	10	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAATGTTTCTTGGTTG	NA	False	NA	21	True	ATTAAA	-33	NA	22130816	22270768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_119144_119	chr3	+	4468	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	11	1	11	-1	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGCCTCTGGCCCTTCC	5579	False	NA	9	True	AATAAA	-16	NA	27237124	27299106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
Isoform_119145_145	chr3	+	4437	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	41	2	2	-2	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATGCCTCTGGCCCTTC	5609	False	NA	8	True	AATAAA	-15	NA	27237154	27299105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
Isoform_119164_22	chr3	+	4905	27	FSM	ENSMUSG00000027695.17	ENSMUST00000120834.8	4849	27	-57	1	-57	-1	multi-exon	TRUE	canonical	1	4	junction_2	5.02258214078643	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGGTGAAATCATTTCA	8149	False	NA	NA	False	AATAAA	-23	NA	27992786	28187387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_27992900_28006661_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
Isoform_119168_8	chr3	+	6634	31	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	20	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	4.82171016226493	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCCATGCCTTTTATAT	NA	False	NA	7	True	AATAAA	-17	NA	28463599	28724730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
Isoform_119171_84	chr3	+	4965	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	59	3	59	-3	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTGTATGTTCTTAA	NA	False	NA	16	True	AATAAA	-19	NA	28835483	28852992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
Isoform_119172_38	chr3	+	5031	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTATGTTCTTAAAAT	NA	False	NA	19	True	AATAAA	-22	NA	28835420	28852995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
Isoform_119174_12	chr3	+	5069	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	-43	1	-43	-1	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGTATGTTCTTAAAA	NA	False	NA	18	True	AATAAA	-21	NA	28835381	28852994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
Isoform_119177_31	chr3	+	547	4	FSM	ENSMUSG00000039221.11	ENSMUST00000193168.2	552	4	1	4	1	2	multi-exon	FALSE	canonical	3	450	junction_2	3246.42750659175	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTATGGTTCATCA	NA	False	NA	13	True	AATAAA	-18	NA	28859659	28861567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_28859693_28860648_28860742_28860818_28861008_28861335
Isoform_119178_654	chr3	+	478	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	75	-1	1	0	multi-exon	FALSE	canonical	3	2038	junction_1	2670.46824857864	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACATGTATGGTTCAT	NA	False	NA	11	True	AATAAA	-16	NA	28859659	28861565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
Isoform_119182_90	chr3	+	544	4	NIC	ENSMUSG00000039221.11	novel	552	4	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	450	junction_2	3086.0505864652	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTATGGTTCATCA	NA	False	NA	13	True	AATAAA	-18	NA	28859659	28861567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_28859693_28860651_28860742_28860818_28861008_28861335
Isoform_119183_1160	chr3	+	475	4	FSM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	42	8	1	0	multi-exon	FALSE	canonical	3	3779	junction_1	1855.270390596	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACATGTATGGTTCAT	NA	False	NA	11	True	AATAAA	-16	NA	28859659	28861565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_28859693_28860651_28860742_28860885_28861008_28861335
Isoform_119197_10	chr3	+	4359	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-4	-881	1	-491	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATGTTAAATTCCATAG	8788	False	NA	NA	False	AATAAA	-18	NA	30656788	30673531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
Isoform_119209_19	chr3	+	4488	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	577	490	-2	-490	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTTAAATTCCATAGG	8790	False	NA	NA	False	AATAAA	-19	NA	30656790	30673532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
Isoform_119213_10	chr3	+	4978	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	575	2	1	-2	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCACTCACTATTTTG	8788	False	NA	NA	False	AATAAA	-14	NA	30656788	30674020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
Isoform_119218_8	chr3	+	1715	2	ISM	ENSMUSG00000027703.17	ENSMUST00000108265.3	2092	6	113	20942	113	-20942	5prime_fragment	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAACAAAAAATAAAC	NA	False	NA	NA	False	ACTAAA	-40	NA	30702147	30705506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_30702410_30704053
Isoform_119220_11	chr3	+	2112	6	FSM	ENSMUSG00000027703.17	ENSMUST00000108265.3	2092	6	113	-133	113	1	multi-exon	FALSE	canonical	3	7	junction_1	18.0177690072883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTGTGGGAAGAATGA	NA	False	NA	6	True	NA	NA	NA	30702147	30726581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30702410_30704053_30705102_30709785_30709960_30713202_30713342_30714049_30714247_30726289
Isoform_119221_5	chr3	+	1983	5	NNC	ENSMUSG00000027703.17	novel	2092	6	NA	NA	115	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.2294017814916	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTGGGAAGAATGATA	NA	False	NA	8	True	NA	NA	NA	30702149	30726583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_30702410_30704053_30705102_30709785_30709960_30714039_30714247_30726289
Isoform_119222_16	chr3	+	2238	4	ISM	ENSMUSG00000051860.14	ENSMUST00000172593.2	1511	8	5617	-1672	440	1	3prime_fragment	FALSE	canonical	2	5	junction_3	2.44948974278318	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACCTCAGGCTCTTC	972	False	NA	NA	False	ATTAAA	-10	NA	30810810	30821316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_30810898_30812474_30812594_30816287_30816399_30819395
Isoform_119228_709	chr3	+	2335	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	458	1174	-3	57	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAAGCCATTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	30847481	30874238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
Isoform_119232_108	chr3	+	3513	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	452	2	-9	-2	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACGCAGTAGTGATGGA	NA	False	NA	NA	False	AATAAA	-19	NA	30847475	30875410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
Isoform_119233_14	chr3	+	2540	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	261	1166	-200	65	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGACTCTAATTGCT	NA	False	NA	14	True	AATAAA	-24	NA	30847284	30874246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
Isoform_119246_6	chr3	+	4939	2	ISM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-43	13727	0	2604	5prime_fragment	FALSE	canonical	3	294	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCCACAATTAAAGGCCT	NA	False	NA	NA	False	NA	NA	NA	30910098	30936214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_30910207_30931383
Isoform_119247_50	chr3	+	1897	5	NIC	ENSMUSG00000037661.15	novel	346	4	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	111.904814463007	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATTTTATTTGTTTTT	NA	False	NA	31	True	AATAAA	-44	NA	30910099	30951338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_30910207_30931383_30931482_30944090_30944191_30948277_30948390_30949858
Isoform_119249_167	chr3	+	1786	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-42	-1398	1	0	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910099	30951339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
Isoform_119253_16	chr3	+	1687	3	FSM	ENSMUSG00000037661.15	ENSMUST00000166278.7	1689	3	0	2	0	0	multi-exon	FALSE	canonical	3	44	junction_2	125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910098	30951339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30910207_30931383_30931482_30949858
Isoform_119254_12	chr3	+	2127	5	NIC	ENSMUSG00000037661.15	novel	1977	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	102.806857747915	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910099	30951339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_30910207_30931383_30931711_30944090_30944191_30948277_30948390_30949858
Isoform_119255_84	chr3	+	2023	4	FSM	ENSMUSG00000037661.15	ENSMUST00000046748.13	1977	4	-46	0	-7	0	multi-exon	FALSE	canonical	3	100	junction_2	83.6341238171756	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910091	30951339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30910207_30931383_30931711_30944090_30944191_30949858
Isoform_119257_7	chr3	+	1921	3	FSM	ENSMUSG00000037661.15	ENSMUST00000108259.8	1916	3	0	-5	0	3	multi-exon	FALSE	canonical	3	8	junction_2	143	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTTTTTTGTTTT	NA	False	NA	37	True	AATAAA	-22	NA	30910098	30951344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30910207_30931383_30931711_30949858
Isoform_119258_15	chr3	+	2047	5	NIC	ENSMUSG00000037661.15	novel	754	5	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	77.9947914927657	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTTTTTTGTTTT	NA	False	NA	37	True	AATAAA	-22	NA	30910143	30951344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30948277_30948390_30949858
Isoform_119259_61	chr3	+	1930	4	NIC	ENSMUSG00000037661.15	novel	2139	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	76.6130247122221	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910143	30951339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30949858
Isoform_119260_6	chr3	+	1830	3	NIC	ENSMUSG00000037661.15	novel	2139	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910143	30951339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_30910395_30931383_30931482_30949858
Isoform_119261_10	chr3	+	2173	4	FSM	ENSMUSG00000037661.15	ENSMUST00000108258.8	2139	4	-32	-2	-6	0	multi-exon	FALSE	canonical	3	82	junction_1	77.1895214535122	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910131	30951341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_30910395_30931383_30931711_30944090_30944191_30949858
Isoform_119264_1886	chr3	+	4468	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	19	221	19	-221	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	1886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGACCATTTTCA	NA	False	NA	19	True	AATAAA	-15	NA	31049914	31106887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
Isoform_119265_51	chr3	+	4675	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	19	14	19	-14	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCCGTT	NA	False	NA	NA	False	NA	NA	NA	31049914	31107094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
Isoform_119305_4	chr3	+	3612	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	-144	3110	-144	183	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTTTTGTATGTTT	NA	False	NA	NA	False	TATAAA	-23	NA	31149062	31173612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
Isoform_119306_57	chr3	+	6700	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	-120	-2	-120	2	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGGTTCAAGTCATCT	NA	False	NA	16	True	AATAAA	-18	NA	31149086	31176724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
Isoform_119308_3	chr3	+	3462	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	-174	3290	-174	3	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGGAAGTACTCATTC	NA	False	NA	NA	False	ATTAAA	-29	NA	31149032	31173432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
Isoform_119311_8	chr3	+	6873	7	FSM	ENSMUSG00000027660.17	ENSMUST00000029194.12	6717	7	-157	1	-154	-1	multi-exon	FALSE	canonical	0	0	junction_2	41.5668805126817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTTCAAGTCATCTT	NA	False	NA	17	True	AATAAA	-19	NA	31149052	31176725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
Isoform_119312_27	chr3	+	6711	7	FSM	ENSMUSG00000027660.17	ENSMUST00000029194.12	6717	7	5	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_2	41.5668805126817	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTTCAAGTCATCTT	NA	False	NA	17	True	AATAAA	-19	NA	31149214	31176725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
Isoform_119317_99	chr3	+	1803	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	314	94	38	-4	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGGCAAGCTGAAATA	3220	False	NA	18	True	AATAAA	-18	NA	32564721	32574888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
Isoform_119318_5	chr3	+	1892	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	298	21	22	-21	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGGTGTTTTCAATTGC	3204	False	NA	91	True	AATATA	-11	NA	32564705	32574961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
Isoform_119321_70	chr3	+	1909	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	74	5	-55	-5	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3256	False	NA	17	True	AATAAA	-17	NA	32564757	32574887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
Isoform_119322_107	chr3	+	1819	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	164	5	35	-5	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3346	False	NA	17	True	AATAAA	-17	NA	32564847	32574887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
Isoform_119324_11	chr3	+	1968	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	92	-72	-37	-18	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGTTTTCAATTGCATG	3274	False	NA	94	True	AATATA	-14	NA	32564775	32574964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
Isoform_119328_995	chr3	+	2971	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	30	1561	30	325	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGGCCTATCATTGTAGC	NA	False	NA	21	True	ATTAAA	-18	NA	32583643	32631827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
Isoform_11933_158	chr11	-	3917	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	74	7	-60	-7	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTTAGCCTTTTGT	9334	False	NA	NA	False	AATAAA	-9	NA	20691515	20635090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
Isoform_119330_55	chr3	+	5182	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	30	-650	30	650	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGACTTTTGACTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	32583643	32634038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
Isoform_119333_106	chr3	+	4526	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	30	6	30	-6	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGCATTTATCTCAGT	NA	False	NA	NA	False	AATAAA	-23	NA	32583643	32633382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
Isoform_11934_95	chr11	-	3971	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	20	7	20	-7	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTTAGCCTTTTGT	9280	False	NA	NA	False	AATAAA	-9	NA	20691569	20635090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
Isoform_119345_1295	chr3	+	1805	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	204	1	-54	-1	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGCTGGATTTGTCTGT	NA	False	NA	22	True	AATAAA	-19	NA	32762859	32781121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
Isoform_119348_35	chr3	+	1998	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	9	3	9	2	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCGTGCTGGATTTGTCT	NA	False	NA	20	True	AATAAA	-17	NA	32762664	32781119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
Isoform_11935_7	chr11	-	4999	7	ISM	ENSMUSG00000049659.16	ENSMUST00000177543.8	3082	8	-72	10269	62	2	5prime_fragment	FALSE	canonical	3	125	junction_5	19.2757763930679	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAATGTTTATATTTTA	9322	False	NA	NA	False	AATAAA	-20	NA	20691527	20646010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
Isoform_119352_41	chr3	+	1684	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-31	2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_11	397.893227930978	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCGTGCTGGATTTGTCT	NA	False	NA	20	True	AATAAA	-17	NA	32762882	32781119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32779395_32779483_32780670
Isoform_11936_14	chr11	-	3714	4	FSM	ENSMUSG00000042363.15	ENSMUST00000144441.8	913	4	-30	-2771	-30	-3	multi-exon	FALSE	canonical	3	309	junction_3	21.6384431561566	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTTCTGGGTTATTA	NA	False	NA	-6	True	AATAAA	-14	NA	20780785	20773578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275
Isoform_119366_1972	chr3	+	660	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	84	335	-2	1	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	1972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTCTGTGGCTGGT	NA	False	NA	24	True	AATAAA	-26	NA	32791222	32805380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
Isoform_119367_150	chr3	+	988	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	84	7	-2	-7	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTAGCATCTTGCTTTA	NA	False	NA	3	True	AATAAA	-17	NA	32791222	32805708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
Isoform_119373_5	chr3	+	2808	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	-17	4789	-17	-4	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	32871677	32987431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
Isoform_119375_23	chr3	+	2748	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	43	4789	18	-4	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	32871737	32987431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
Isoform_119376_4	chr3	+	3169	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	-51	4462	-51	315	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTGGTGGCATTGTG	NA	False	NA	NA	False	TTTAAA	-35	NA	32871643	32987758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
Isoform_119378_7	chr3	+	4723	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	45	2812	20	1965	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATGTTGTAAAATC	NA	False	NA	11	True	AATAAA	-20	NA	32871739	32989408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
Isoform_119379_10	chr3	+	3075	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	44	4461	19	316	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGGTGGCATTGTGT	NA	False	NA	NA	False	TTTAAA	-36	NA	32871738	32987759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
Isoform_119380_3	chr3	+	2035	11	NIC	ENSMUSG00000027677.18	novel	2724	10	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	64.0059372246044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTGTTTACATTTTC	NA	False	NA	NA	False	NA	NA	NA	33854342	33861652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
Isoform_119381_3	chr3	+	671	3	FSM	ENSMUSG00000027677.18	ENSMUST00000200559.2	680	3	12	-3	4	3	multi-exon	FALSE	canonical	3	164	junction_1	17.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	33854343	33855643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339
Isoform_119383_8	chr3	+	1398	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	336	7927	-7	-564	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTCTTTATTTCCTCTT	NA	False	NA	NA	False	CATAAA	-10	NA	33854316	33861082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
Isoform_119386_29	chr3	+	2131	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	380	7150	-1	-189	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGGTGATTCGGTTA	NA	False	NA	2	True	AATATA	-16	NA	33854360	33861859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
Isoform_119387_8	chr3	+	4620	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	328	4713	-15	203	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGCCTGTTTTATTT	NA	False	NA	4	True	NA	NA	NA	33854308	33864296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
Isoform_119395_49	chr3	+	2830	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-59	-87	1	87	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGTGATAAATTATG	NA	False	NA	12	True	ATTAAA	-18	NA	33854340	33864180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
Isoform_119396_9	chr3	+	2934	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-49	-201	-8	201	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCAGAGCCTGTTTTAT	NA	False	NA	2	True	NA	NA	NA	33854350	33864294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
Isoform_119397_5	chr3	+	3587	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-93	-810	-17	810	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTTTCTACCAGTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	33854306	33864903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
Isoform_119399_7	chr3	+	2954	12	FSM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	-46	-470	-8	203	multi-exon	FALSE	canonical	3	25	junction_10	51.4495660937939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGCCTGTTTTATTT	NA	False	NA	4	True	NA	NA	NA	33854315	33864296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
Isoform_11940_616	chr11	-	3326	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	33	3	-1	-3	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTTCTGGGTTATTA	NA	False	NA	-6	True	AATAAA	-14	NA	20781023	20773578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
Isoform_119400_6	chr3	+	3713	12	FSM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	-39	-1236	-1	969	multi-exon	FALSE	canonical	3	25	junction_10	51.4495660937939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCACTTCAACATTTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	33854322	33865062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
Isoform_119402_6	chr3	+	3313	12	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	5	82	combination_of_known_junctions	TRUE	canonical	3	14	junction_10	54.0434474740096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTTTTAAGTGATAAA	NA	False	NA	7	True	ATTAAA	-13	NA	33854344	33864175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987_33862098_33862834
Isoform_119403_3	chr3	+	3559	11	FSM	ENSMUSG00000027677.18	ENSMUST00000117915.8	4913	11	-26	1380	-4	967	multi-exon	FALSE	canonical	3	18	junction_5	63.6361532464055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATCACTTCAACATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	33854335	33865060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
Isoform_119413_135	chr3	+	3056	15	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-11	3589	-1	-3581	5prime_fragment	FALSE	canonical	3	1060	junction_7	79.2243005391551	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATTTTTGCATTCTTT	4848	False	NA	5	True	AATAAA	-14	NA	34074245	34119905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
Isoform_119416_27	chr3	+	2214	18	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	384.426270035524	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4848	False	NA	13	True	ATTAAA	-16	NA	34074245	34123487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
Isoform_119419_746	chr3	+	2133	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-11	7	-1	1	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4848	False	NA	13	True	ATTAAA	-16	NA	34074245	34123487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
Isoform_11942_38	chr11	-	3545	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	-186	3	-186	-3	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTTCTGGGTTATTA	NA	False	NA	-6	True	AATAAA	-14	NA	20781242	20773578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
Isoform_119420_175	chr3	+	2767	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-11	-627	-1	-350	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4848	False	NA	10	True	AATAAA	-14	NA	34074245	34124121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
Isoform_119426_439	chr3	+	2043	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-11	982	-1	-2	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTATTTTGTTTTC	4848	False	NA	15	True	ATTAAA	-18	NA	34074245	34123489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
Isoform_119427_131	chr3	+	2675	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-11	350	-1	-350	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4848	False	NA	10	True	AATAAA	-14	NA	34074245	34124121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
Isoform_119437_52	chr3	+	2128	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	-8	7	-1	1	multi-exon	FALSE	canonical	3	506	junction_14	198.096296929405	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4848	False	NA	13	True	ATTAAA	-16	NA	34074245	34123487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
Isoform_11944_28	chr11	-	3551	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	33	-222	-1	222	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCATGCCCTGACCTT	NA	False	NA	NA	False	AATAAA	-14	NA	20781023	20773353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
Isoform_119447_7	chr3	+	3320	12	ISM	ENSMUSG00000037400.18	ENSMUST00000200445.5	3028	22	-4	20857	-4	-1450	5prime_fragment	FALSE	canonical	3	350	junction_9	58.7120723362455	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATTGTACACACCAAGT	NA	False	NA	NA	False	NA	NA	NA	35808278	35862980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916
Isoform_119450_394	chr3	+	4894	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	-27	1	1	1	multi-exon	FALSE	canonical	2	274	junction_18	53.5097310762941	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTTGTTGCATGTTAT	NA	False	NA	10	True	AATAAA	-16	NA	35808255	35910424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
Isoform_119457_32	chr3	+	6354	29	FSM	ENSMUSG00000037400.18	ENSMUST00000196700.5	6322	29	-28	-4	0	1	multi-exon	FALSE	canonical	2	274	junction_18	53.267171706715	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTTGTTGCATGTTAT	NA	False	NA	10	True	AATAAA	-16	NA	35808254	35910424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
Isoform_119468_3	chr3	+	753	3	FSM	ENSMUSG00000085655.6	ENSMUST00000122858.6	490	3	-142	-121	-142	121	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATAAATCTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	35987051	35996987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_35987317_35991752_35991848_35996594
Isoform_119469_55	chr3	+	2514	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	21	1395	21	86	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGCTCCTCCACT	NA	False	NA	9	True	AATAAA	-28	NA	36120148	36145607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
Isoform_119470_237	chr3	+	2459	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	76	1395	-12	86	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGCTCCTCCACT	NA	False	NA	9	True	AATAAA	-28	NA	36120203	36145607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
Isoform_119473_68	chr3	+	3856	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	95	-21	2	21	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATTTTCCATTAGT	NA	False	NA	26	True	NA	NA	NA	36120222	36147023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
Isoform_119475_15	chr3	+	3919	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	21	-10	21	10	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAAGGAATTTGTTAAT	NA	False	NA	15	True	NA	NA	NA	36120148	36147012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
Isoform_119479_6	chr3	+	2929	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	75	3685	-70	-3678	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACACTGTCCAGTGTACA	NA	False	NA	NA	False	NA	NA	NA	36205240	36220806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
Isoform_11948_20	chr11	-	3630	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	-270	2	-270	-2	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCTTCTGGGTTATTAC	NA	False	NA	-5	True	AATAAA	-15	NA	20781326	20773577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
Isoform_119480_22	chr3	+	2678	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	52	3959	52	3709	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCAACCGGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	36205217	36220532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
Isoform_119482_4	chr3	+	6631	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	52	6	52	1	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATATACTACTATTAT	NA	False	NA	22	True	AATAAA	-13	NA	36205217	36224485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
Isoform_119485_12	chr3	+	1727	11	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	20	2	-1	-2	intron_retention	FALSE	canonical	3	414	junction_7	34.2175393621458	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTGAGAGCCGAATGA	NA	False	NA	13	True	AATAAA	-21	NA	36606774	36619874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366
Isoform_119486_394	chr3	+	1591	12	FSM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	25	1	4	-1	multi-exon	FALSE	canonical	3	373	junction_11	43.5980892749872	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGAGAGCCGAATGAG	NA	False	NA	14	True	AATAAA	-22	NA	36606779	36619875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
Isoform_119490_6	chr3	+	1808	12	FSM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	16	-207	-5	207	multi-exon	FALSE	canonical	3	373	junction_11	43.5980892749872	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACATCATTCATATTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	36606770	36620083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
Isoform_119494_4	chr3	+	3134	14	ISM	ENSMUSG00000037270.19	ENSMUST00000138950.8	4998	27	24078	-3	-2037	1	3prime_fragment	FALSE	canonical	3	17	junction_3	9.57869924832912	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAGTTGTTTCATATCT	NA	False	NA	6	True	AATAAA	-20	NA	37089934	37107166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
Isoform_119495_48	chr3	+	2440	2	FSM	ENSMUSG00000051444.10	ENSMUST00000057975.8	2433	2	-8	1	-8	-1	multi-exon	FALSE	canonical	3	15	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCCATTCTGTTTTT	1243	False	NA	6	True	AATAAA	-18	NA	37366694	37375598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_37366735_37373198
Isoform_119497_132	chr3	+	2940	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	-24	0	-10	0	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474436	37633245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
Isoform_119499_227	chr3	+	2903	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	392	0	-10	0	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474436	37633245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
Isoform_11950_39	chr11	-	2495	10	FSM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	-347	535	-347	0	multi-exon	FALSE	canonical	3	61	junction_9	120.111779214916	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	-7	True	AATAAA	-21	NA	21320824	21271672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
Isoform_119500_360	chr3	+	2860	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	432	3	16	3	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTAGTTTTATCTTGTG	NA	False	NA	8	True	AATAAA	-17	NA	37474476	37633242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
Isoform_119504_13	chr3	+	3297	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	-2	0	-2	0	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474042	37633245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
Isoform_119506_15	chr3	+	2734	15	NIC	ENSMUSG00000027722.15	novel	3295	16	NA	NA	-11	1	combination_of_known_splicesites	FALSE	canonical	1	18	junction_14	113.124998590596	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCTAGTTTTATCTTG	NA	False	NA	6	True	AATAAA	-15	NA	37474435	37633240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37632900
Isoform_119507_44	chr3	+	2933	17	NIC	ENSMUSG00000027722.15	novel	2916	17	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	83	junction_15	130.436227233848	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCTAGTTTTATCTTG	NA	False	NA	6	True	AATAAA	-15	NA	37474435	37633240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
Isoform_119508_175	chr3	+	2900	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	-10	0	-10	0	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474436	37633245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
Isoform_119512_73	chr3	+	2494	3	FSM	ENSMUSG00000037211.13	ENSMUST00000108109.8	2451	3	-45	2	-45	-2	multi-exon	FALSE	canonical	3	36	junction_1	4	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCGAGTGCATCTTTTT	NA	False	NA	NA	False	AATATA	-17	NA	37694050	37698745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_37694214_37694668_37694958_37696703
Isoform_119513_9	chr3	+	2208	2	NIC	ENSMUSG00000037211.13	novel	2451	3	NA	NA	-48	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCGAGTGCATCTTTTT	NA	False	NA	NA	False	AATATA	-17	NA	37694047	37698745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_37694214_37696703
Isoform_119514_53	chr3	+	2552	3	FSM	ENSMUSG00000037211.13	ENSMUST00000038569.8	2481	3	-72	1	-61	-1	multi-exon	FALSE	canonical	3	34	junction_1	5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGAGTGCATCTTTTTT	NA	False	NA	NA	False	AATATA	-18	NA	37694034	37698746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_37694255_37694668_37694958_37696703
Isoform_119516_61	chr3	+	2250	2	NIC	ENSMUSG00000037211.13	novel	2481	3	NA	NA	-48	-1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGAGTGCATCTTTTTT	NA	False	NA	NA	False	AATATA	-18	NA	37694047	37698746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_37694255_37696703
Isoform_119517_82	chr3	+	1141	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	14	50157	14	1	5prime_fragment	FALSE	canonical	3	119	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCACTTGAGAACACC	NA	False	NA	2	True	AATAAA	-18	NA	40594929	40609047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_40595159_40608135
Isoform_119518_5	chr3	+	1298	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	14	50000	14	158	5prime_fragment	FALSE	canonical	3	119	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTATTTTTGCATTG	NA	False	NA	NA	False	AATACA	-15	NA	40594929	40609204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_40595159_40608135
Isoform_119520_8	chr3	+	1089	3	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	4	40213	4	9945	5prime_fragment	FALSE	canonical	3	18	junction_2	50.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCAGCAGCAGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	40594919	40618991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_40595159_40608135_40608684_40618689
Isoform_119521_5	chr3	+	928	4	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	5	32148	5	18010	5prime_fragment	FALSE	canonical	3	18	junction_2	47.1475226166645	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGGCACAGTCGA	NA	False	NA	NA	False	NA	NA	NA	40594920	40627056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000
Isoform_119524_41	chr3	+	1590	6	FSM	ENSMUSG00000069041.9	ENSMUST00000091184.9	2128	6	29	509	29	-509	multi-exon	FALSE	canonical	3	17	junction_3	1.93907194296653	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATTGTAATGAGCCTT	NA	False	NA	NA	False	AATAAA	-10	NA	40663313	40680018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_40663657_40670945_40671074_40674920_40675039_40675936_40676092_40677055_40677182_40679298
Isoform_119526_17	chr3	+	3788	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	23	5668	23	851	multi-exon	FALSE	canonical	3	15	junction_16	4.58930587290297	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCCTTTTGAAAACTTG	NA	False	NA	2	True	ATTAAA	-19	NA	40699884	40744870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
Isoform_119527_3	chr3	+	4965	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	44	4470	-10	2049	multi-exon	FALSE	canonical	3	15	junction_16	4.58930587290297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCTGAAAATACAAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	40699905	40746068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
Isoform_119533_395	chr3	+	3454	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	24	1	1	0	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTTTATTGGCTAAAT	7809	False	NA	26	True	AATAAA	-22	NA	40754477	40771317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
Isoform_119542_10	chr3	+	3303	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_9	95.5102569553316	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7809	False	NA	25	True	AATAAA	-21	NA	40754477	40771316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
Isoform_119544_27	chr3	+	3450	16	FSM	ENSMUSG00000025758.11	ENSMUST00000203895.3	3320	16	1	-131	1	0	multi-exon	FALSE	canonical	3	18	junction_4	89.82788480694	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTTTATTGGCTAAAT	7809	False	NA	26	True	AATAAA	-22	NA	40754477	40771317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759446_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
Isoform_119550_3	chr3	+	4380	14	NIC	ENSMUSG00000037818.17	novel	3277	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	9.23909880592053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTGTGGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	40848706	40892573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_40848879_40859320_40859429_40860306_40860392_40860601_40860654_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
Isoform_119553_17	chr3	+	4337	13	FSM	ENSMUSG00000037818.17	ENSMUST00000108077.10	3277	13	-60	-1000	-1	1	multi-exon	FALSE	non_canonical	0	0	junction_6	7.57554545157567	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTTGTGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	40848696	40892572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
Isoform_119558_45	chr3	+	2551	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	-43	-11	-43	0	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTTTTTAAGGGCTT	9974	False	NA	13	True	AATAAA	-26	NA	40904219	40932228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
Isoform_119563_8	chr3	+	4488	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	-46	-1945	-46	1934	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTCTTGTCAAGTGT	9971	False	NA	4	True	NA	NA	NA	40904216	40934162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
Isoform_119564_3	chr3	+	2447	9	NIC	ENSMUSG00000025762.17	novel	2497	10	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	22.2920950114609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTTTTAAGGGCTTT	NA	False	NA	14	True	AATAAA	-27	NA	40904264	40932229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_40905120_40916042_40916102_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
Isoform_119565_3	chr3	+	1809	10	NIC	ENSMUSG00000025762.17	novel	1505	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.0348108123445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTTTTTAAGGGCTT	NA	False	NA	13	True	AATAAA	-26	NA	40905227	40932228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_40905386_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
Isoform_119567_43	chr3	+	3399	9	ISM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	2	10093	2	76	5prime_fragment	FALSE	canonical	3	683	junction_7	60.6727904418447	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTCGTCATTTTGCG	NA	False	NA	8	True	ATTAAA	-13	NA	41510167	41561206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
Isoform_11957_442	chr11	-	2063	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-14	-5	-14	5	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTAGTGCTCACTCTT	NA	False	NA	-2	True	AATAAA	-26	NA	21321215	21271667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
Isoform_11958_28	chr11	-	2141	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-98	1	-98	-1	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGCTGTCTAGTGCTC	NA	False	NA	-8	True	AATAAA	-20	NA	21321299	21271673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
Isoform_119581_1573	chr3	+	5472	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	2	7	2	-1	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41510167	41571292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
Isoform_119585_95	chr3	+	5501	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	-27	7	-27	-1	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41510138	41571292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
Isoform_11960_71	chr11	-	2602	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-28	-530	-28	-5	multi-exon	TRUE	canonical	3	305	junction_7	61.1714853284106	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGCCTTTTAAGTC	NA	False	NA	NA	False	AATATA	-13	NA	21321229	21271142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
Isoform_119625_8	chr3	+	3553	7	FSM	ENSMUSG00000025766.15	ENSMUST00000146165.8	3574	7	17	4	17	-4	multi-exon	TRUE	canonical	3	22	junction_1	8.72576007513895	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATATTTTGTGCTGTGT	NA	False	NA	8	True	ATTAAA	-18	NA	41697069	41713370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
Isoform_119627_206	chr3	+	2558	3	FSM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	488	13	465	0	multi-exon	FALSE	canonical	3	120	junction_1	3.5	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCTTGTCTCTTTGGTC	9634	False	NA	14	True	AATAAA	-23	NA	51132355	51159052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51132709_51155225_51155496_51157117
Isoform_119630_6	chr3	+	3020	3	FSM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	25	14	2	-1	multi-exon	FALSE	canonical	3	120	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATCTTGTCTCTTTGGT	9171	False	NA	13	True	AATAAA	-22	NA	51131892	51159051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51132709_51155225_51155496_51157117
Isoform_119636_141	chr3	+	4176	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-47	1961	-47	1806	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323389	51381445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
Isoform_119638_531	chr3	+	4138	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-9	1961	-9	1806	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323427	51381445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
Isoform_11964_32	chr11	-	1764	8	NNC	ENSMUSG00000001891.17	novel	2683	10	NA	NA	-6803	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	143.823020495642	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGCTGTCTAGTGCTC	NA	False	NA	-8	True	AATAAA	-20	NA	21286695	21271673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21286551
Isoform_119641_130	chr3	+	5578	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-10	522	-10	-522	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGTGCCGATGTTGC	NA	False	NA	NA	False	AATAAA	-22	NA	51323426	51382884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
Isoform_119643_49	chr3	+	5613	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-47	524	-47	-524	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGTAGTGCCGATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	51323389	51382882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
Isoform_119647_27	chr3	+	6099	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-9	0	-9	0	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTCACTTTTCCCTT	NA	False	NA	3	True	AATAAA	-20	NA	51323427	51383406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
Isoform_119675_68	chr3	+	2920	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	245	327	245	-327	multi-exon	FALSE	canonical	3	63	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCGTTTCTTTCTTTGG	NA	False	NA	3	True	AATAAA	-16	NA	51391631	51403326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51392002_51400776
Isoform_119679_10	chr3	+	2960	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	204	328	204	-328	multi-exon	FALSE	canonical	3	63	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGCGTTTCTTTCTTTG	NA	False	NA	2	True	AATAAA	-15	NA	51391590	51403325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51392002_51400776
Isoform_119683_48	chr3	+	5510	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	34	3121	34	-3121	multi-exon	FALSE	canonical	3	61	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTGGCTTGGTGTGTGT	NA	False	NA	9	True	TATAAA	-24	NA	52175790	52257521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_52176844_52252459_52253812_52254416
Isoform_119685_19	chr3	+	4978	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	5	3682	5	-3682	multi-exon	FALSE	canonical	3	61	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGATGTATGGAGTATA	NA	False	NA	NA	False	TATAAA	-18	NA	52175761	52256960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_52176844_52252459_52253812_52254416
Isoform_119687_12	chr3	+	2086	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	22	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGAGTCACCGAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	52948970	53169100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
Isoform_119689_31	chr3	+	4544	13	FSM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	-69	-3	-69	3	multi-exon	FALSE	canonical	3	36	junction_11	9.75071222469871	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATAGAAGTGTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	53371017	53389179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
Isoform_119697_78	chr3	+	2867	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_6	101.803856252742	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600241	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119698_14	chr3	+	2832	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_23	128.335503580615	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600240	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119700_54	chr3	+	3097	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_6	104.992335589529	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600248	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119710_129	chr3	+	2864	27	FSM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	14	-127	-2	0	multi-exon	FALSE	canonical	3	259	junction_20	89.4210256174979	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600241	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119711_25	chr3	+	2834	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_23	119.269081933775	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600235	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119712_28	chr3	+	2824	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	120.844519648158	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600248	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119713_113	chr3	+	3101	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	226	junction_20	93.1009504905751	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600241	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119715_31	chr3	+	3064	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_23	121.920310572839	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600242	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119716_12	chr3	+	3067	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	123.457177013785	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600242	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119718_13	chr3	+	3090	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_18	128.903138948473	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600248	54636183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119732_16	chr3	+	2849	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	125.83210025912	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119735_30	chr3	+	2863	27	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	125.987554565225	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600280	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119738_22	chr3	+	3102	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	128.485425001709	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_11974_1501	chr11	-	1286	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	119	553	119	-458	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTCAGACTCTGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	21521815	21507244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
Isoform_119741_55	chr3	+	2862	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	116.599933013266	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119744_44	chr3	+	3099	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	119.346079476414	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_119765_12	chr3	+	1090	10	FSM	ENSMUSG00000036632.10	ENSMUST00000141191.8	2972	10	0	1882	0	-359	multi-exon	FALSE	canonical	3	42	junction_2	150.752270011367	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTTTGTATATTCTT	NA	False	NA	20	True	AATAAA	-24	NA	54642979	54656857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_54643071_54646202_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_119766_10	chr3	+	1445	10	FSM	ENSMUSG00000036632.10	ENSMUST00000141191.8	2972	10	1	1526	1	-3	multi-exon	FALSE	canonical	3	42	junction_2	150.752270011367	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAAGGTGTCCTCTTCC	NA	False	NA	15	True	AATAAA	-19	NA	54642980	54657213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_54643071_54646202_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_119767_201	chr3	+	1447	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	21	3	1	-3	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAAGGTGTCCTCTTCC	NA	False	NA	15	True	AATAAA	-19	NA	54642980	54657213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_119768_254	chr3	+	1093	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	20	358	0	-358	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGTATATTCTTG	NA	False	NA	21	True	AATAAA	-25	NA	54642979	54656858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_119769_11	chr3	+	1495	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	-27	3	-27	-3	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAAGGTGTCCTCTTCC	NA	False	NA	15	True	AATAAA	-19	NA	54642932	54657213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_11977_24	chr11	-	1745	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	119	94	119	1	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGCTGTAATTTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	21521815	21506785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
Isoform_119770_16	chr3	+	1173	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	-60	358	-60	-358	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGTATATTCTTG	NA	False	NA	21	True	AATAAA	-25	NA	54642899	54656858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_119772_3	chr3	+	3572	4	ISM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	30686	861	30686	-861	3prime_fragment	FALSE	canonical	3	10	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACATCGTCTTACCTGC	594	False	NA	NA	False	AATAAA	-18	NA	54693688	54707817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_54693743_54696606_54696829_54701652_54701910_54704778
Isoform_119773_250	chr3	+	3761	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	8	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_4	65.469339197826	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGATGTATTCACTGGA	NA	False	NA	20	True	AATAAA	-21	NA	55019536	55044742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
Isoform_119777_29	chr3	+	3591	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	-13	-11	3	0	multi-exon	FALSE	canonical	3	36	junction_3	57.8710741604975	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTATTCACTGGAC	NA	False	NA	21	True	AATAAA	-22	NA	55019536	55044743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
Isoform_119781_5	chr3	+	2487	10	NNC	ENSMUSG00000036580.16	novel	3770	9	NA	NA	-2	-1358	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	79.9825598273974	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCTAATGTCAACCTAT	NA	False	NA	11	True	AATAAA	-22	NA	55019531	55043374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_55019639_55022902_55022992_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
Isoform_119782_20	chr3	+	4027	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	-50	4	3	2	multi-exon	FALSE	canonical	0	0	junction_4	69.2431178890726	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGGCCTCAGATGTAT	NA	False	NA	12	True	AATAAA	-13	NA	55019536	55044734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
Isoform_119788_879	chr3	+	2348	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	12	4	12	-4	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAGTGTGCAAGGAATC	NA	False	NA	16	True	AATAAA	-18	NA	55089460	55117374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
Isoform_119789_68	chr3	+	2476	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	-118	6	-118	-6	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATAGTGTGCAAGGAA	NA	False	NA	14	True	AATAAA	-16	NA	55089330	55117372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
Isoform_119798_3	chr3	+	2028	9	FSM	ENSMUSG00000036503.14	ENSMUST00000198214.5	2027	9	-3	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_8	54.9816730829465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGCTTTTAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	57643502	57733719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57732522
Isoform_119800_6	chr3	+	1106	9	FSM	ENSMUSG00000036503.14	ENSMUST00000199041.2	1062	9	-45	1	0	-1	multi-exon	FALSE	canonical	3	113	junction_8	24.8281594162757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCTCTTCATACAATAG	NA	False	NA	NA	False	AATAAA	-22	NA	57643495	57740652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384
Isoform_119801_133	chr3	+	2218	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	60	400	2	-288	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATTGTTCTGGTGAA	NA	False	NA	22	True	AATAAA	-22	NA	57643542	57742252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_119802_39	chr3	+	2664	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	14	0	1	0	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTTGTTGAGTTTT	NA	False	NA	NA	False	AAGAAA	-42	NA	57643496	57742652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_119805_34	chr3	+	2267	10	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	1	-288	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	45.5520323840878	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATTGTTCTGGTGAA	NA	False	NA	22	True	AATAAA	-22	NA	57643503	57742252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_119806_5	chr3	+	2687	10	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	45.5520323840878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTTGTTGAGTTTT	NA	False	NA	NA	False	AAGAAA	-42	NA	57643483	57742652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_119807_6	chr3	+	2804	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	55.1311164407179	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTGTTTCTTTGTTGA	NA	False	NA	NA	False	AAGAAA	-37	NA	57643495	57742647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_57643622_57655311_57655456_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_119808_8	chr3	+	2408	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	-289	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	55.1311164407179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTATTGTTCTGGTGA	NA	False	NA	21	True	AATAAA	-21	NA	57643495	57742251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_57643622_57655311_57655456_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_119811_49	chr3	+	4728	4	FSM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	6	5065	1	-2	multi-exon	FALSE	canonical	3	31	junction_2	37.7447568102732	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGGCTCTATATGTG	NA	False	NA	16	True	ATTAAA	-16	NA	58322141	58369139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_58325035_58335648_58335721_58366751_58366804_58367428
Isoform_119814_12	chr3	+	4815	4	NIC	ENSMUSG00000027806.10	novel	715	5	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	51.1881062574327	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGCTCTATATGT	NA	False	NA	15	True	ATTAAA	-15	NA	58322140	58369138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_58325035_58344737_58344897_58366751_58366804_58367428
Isoform_119816_131	chr3	+	4656	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	1	2	1	-2	multi-exon	FALSE	canonical	3	95	junction_1	10.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGGCTCTATATGTG	NA	False	NA	16	True	ATTAAA	-16	NA	58322141	58369139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_58325035_58366751_58366804_58367428
Isoform_11982_6	chr11	-	2787	5	FSM	ENSMUSG00000005917.16	ENSMUST00000006071.14	2789	5	-9	11	-9	-6	multi-exon	FALSE	canonical	2	4	junction_1	0.433012701892219	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTGTCAGCGTTGCTC	NA	False	NA	NA	False	AATAAA	-14	NA	21951624	21944774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_21947059_21948369_21948522_21949379_21949586_21951121_21951190_21951547
Isoform_119823_16	chr3	+	4797	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	-3	-135	2	135	multi-exon	FALSE	canonical	3	95	junction_1	10.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAATGGTGAGCAATATT	NA	False	NA	NA	False	AGTAAA	-16	NA	58322137	58369276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_58325035_58366751_58366804_58367428
Isoform_11983_9	chr11	-	4663	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-225	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	6.15250402560811	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGCTGCAATTTATTT	9667	False	NA	-2	True	AATAAA	-22	NA	22237020	21955826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
Isoform_119831_117	chr3	+	2290	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	9	0	9	0	multi-exon	TRUE	canonical	3	611	junction_6	73.3195163601748	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433250	58464922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
Isoform_119832_296	chr3	+	2161	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	138	0	-83	0	multi-exon	FALSE	canonical	3	611	junction_6	73.3195163601748	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433379	58464922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
Isoform_119833_519	chr3	+	2077	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	222	0	0	0	multi-exon	FALSE	canonical	3	611	junction_6	73.3195163601748	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433463	58464922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
Isoform_11984_3	chr11	-	4775	23	NNC	ENSMUSG00000042302.15	novel	5046	25	NA	NA	-264	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	7.4523278297888	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCTGCTGCAATTTAT	9628	False	NA	-4	True	AATAAA	-20	NA	22237059	21955828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
Isoform_119847_108	chr3	+	3126	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	31	0	31	0	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCTTTGTGAAAATG	NA	False	NA	15	True	AATAAA	-18	NA	58484087	58500554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
Isoform_119854_8	chr3	+	5663	11	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	36.6727419209418	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTGTGCCTGAGAT	NA	False	NA	24	True	AATAAA	-36	NA	60408641	60537167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
Isoform_119858_29	chr3	+	4930	14	FSM	ENSMUSG00000036885.15	ENSMUST00000079300.13	5638	14	617	91	-38	-91	multi-exon	FALSE	canonical	2	8	junction_11	5.33715346421589	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCTGGTGTAATTT	NA	False	NA	NA	False	TATAAA	-15	NA	62246381	62369551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_62247995_62248764_62248805_62252566_62252713_62285008_62285066_62288251_62288413_62326969_62327123_62330921_62331052_62334009_62334085_62336301_62336392_62339908_62340064_62355513_62355724_62365793_62365862_62367030_62367136_62367624
Isoform_11986_6	chr11	-	4676	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-229	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	6.6296666084233	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGCTGCAATTTATTT	9663	False	NA	-2	True	AATAAA	-22	NA	22237024	21955826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
Isoform_119862_10	chr3	+	5740	23	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2089	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	89.7851890084843	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTGCTTTGCATT	NA	False	NA	18	True	NA	NA	NA	63148890	63291133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_63148988_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_119869_150	chr3	+	5783	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	28	2089	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTGCTTTGCATT	NA	False	NA	18	True	NA	NA	NA	63202896	63291133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_11987_330	chr11	-	2661	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	400	-4	-156	4	multi-exon	FALSE	canonical	3	288	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATAAGTGATACTCTT	4369	False	NA	-24	True	AATAAA	-25	NA	22809701	22784742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_22787196_22809493
Isoform_119872_22	chr3	+	5890	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-15	2153	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAAAATGTGCTTTAAT	NA	False	NA	82	True	AATGAA	-27	NA	63202853	63291197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_119878_75	chr3	+	5754	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	116	-2088	116	2088	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTGCTTTGCAT	NA	False	NA	17	True	NA	NA	NA	63203631	63291132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_11988_168	chr11	-	2692	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	365	0	-191	0	multi-exon	FALSE	canonical	3	288	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACGTATAATAAGTGATAC	4334	False	NA	-28	True	AATAAA	-21	NA	22809736	22784746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_22787196_22809493
Isoform_119903_742	chr3	+	2257	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	21	5827	21	-5827	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGTAACTGAGGCTC	NA	False	NA	15	True	AATAAA	-15	NA	63883547	63924173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
Isoform_119904_1478	chr3	+	2233	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	45	5827	45	-5827	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGTAACTGAGGCTC	NA	False	NA	15	True	AATAAA	-15	NA	63883571	63924173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
Isoform_119909_85	chr3	+	7023	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	57	1025	57	-1025	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTCATTAAGTCTTG	NA	False	NA	25	True	AGTAAA	-29	NA	63883583	63928975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
Isoform_119910_47	chr3	+	7059	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	21	1025	21	-1025	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTCATTAAGTCTTG	NA	False	NA	25	True	AGTAAA	-29	NA	63883547	63928975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
Isoform_119925_8	chr3	+	2015	2	ISM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	42	22461	-8	-14540	5prime_fragment	FALSE	canonical	3	135	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	65435872	65440478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_65436054_65438644
Isoform_119928_34	chr3	+	3809	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	3	379	3	-379	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTCTGTTTTGTTCT	NA	False	NA	15	True	NA	NA	NA	65435833	65462560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
Isoform_119932_7	chr3	+	4168	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	23	0	23	0	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATTTCAGTGTAATGAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	65435853	65462939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
Isoform_119933_160	chr3	+	3775	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	38	378	-12	-378	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTCTGTTTTGTTCTA	NA	False	NA	16	True	NA	NA	NA	65435868	65462561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
Isoform_119935_7	chr3	+	2469	3	FSM	ENSMUSG00000074579.15	ENSMUST00000099075.4	2461	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	10	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTGTGTAATTATTG	NA	False	NA	NA	False	AATAAA	-14	NA	65573640	65593600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_65573733_65576510_65576600_65591312
Isoform_119937_16	chr3	+	3181	10	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	104.560455665079	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACACTGTGACTGCTTC	NA	False	NA	11	True	AATAAA	-11	NA	66893019	67265724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_66893116_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
Isoform_119944_361	chr3	+	3204	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	15	5	2	0	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	False	NA	10	True	AATAAA	-10	NA	66893019	67265723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
Isoform_11995_32	chr11	-	2740	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	-13	-125	-13	7	multi-exon	FALSE	canonical	3	85	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAGTGATACTCTTTCT	3569	False	NA	-21	True	AATAAA	-28	NA	22810501	22784739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_22787196_22810217
Isoform_119951_7	chr3	+	1630	5	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	2	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	154.5202252134	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGACTCTGATCTTTCA	NA	False	NA	NA	False	AATAAA	-22	NA	66893019	66992569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_66991555
Isoform_119953_18	chr3	+	3202	10	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	103.881461410068	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGTGACTGCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	66893018	67265726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_66893140_66901849_66902046_66903803_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
Isoform_119954_7	chr3	+	3083	9	FSM	ENSMUSG00000034544.18	ENSMUST00000046542.13	3062	9	-17	-4	1	-1	multi-exon	FALSE	canonical	2	12	junction_2	112.554153632818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGACTGCTTCCTC	NA	False	NA	14	True	AATAAA	-14	NA	66893018	67265727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_66893140_66901849_66902046_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
Isoform_119958_36	chr3	+	1085	7	FSM	ENSMUSG00000048416.16	ENSMUST00000077916.12	1114	7	30	-1	2	1	multi-exon	FALSE	canonical	3	41	junction_1	4.04145188432738	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGTGGTTAAATTGGTC	NA	False	NA	2	True	AATAAA	-15	NA	67281459	67307332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_67281596_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
Isoform_119959_874	chr3	+	2582	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	35	1461	15	264	multi-exon	FALSE	canonical	0	0	junction_6	154.691388272057	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATATATAATATTATATA	NA	False	NA	NA	False	AGTAAA	-31	NA	67337463	67382401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
Isoform_119960_90	chr3	+	2671	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	15	1392	-5	333	multi-exon	TRUE	canonical	0	0	junction_6	154.691388272057	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTTTTTTTTTTGG	NA	False	NA	NA	False	TATAAA	-9	NA	67337443	67382470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
Isoform_119962_100	chr3	+	4037	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	41	0	21	0	multi-exon	FALSE	canonical	0	0	junction_6	154.691388272057	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCTTCCTGCTTCA	NA	False	NA	11	True	ATTAAA	-25	NA	67337469	67383862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
Isoform_119966_707	chr3	+	2967	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	42	2	42	-2	multi-exon	FALSE	canonical	3	661	junction_4	69.2886394407882	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAGGATAAATGACT	NA	False	NA	17	True	AATAAA	-18	NA	67490115	67511568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
Isoform_119967_400	chr3	+	3009	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	1	1	1	-1	multi-exon	TRUE	canonical	3	661	junction_4	69.2886394407882	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAGGATAAATGACTG	NA	False	NA	18	True	AATAAA	-19	NA	67490074	67511569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
Isoform_11998_60	chr11	-	2696	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	18	-112	18	-6	multi-exon	FALSE	canonical	3	85	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCATCACGTATAATAAG	3600	False	NA	-34	True	AATAAA	-15	NA	22810470	22784752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_22787196_22810217
Isoform_119991_48	chr3	+	2039	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	-2	22	-2	-4	multi-exon	FALSE	canonical	3	12	junction_1	163.233149894529	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATACGTCCTTTTGCTC	NA	False	NA	17	True	AATAAA	-19	NA	68375513	68533792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_68375563_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_119994_32	chr3	+	2301	8	NIC	ENSMUSG00000027777.16	novel	1298	6	NA	NA	-194	-2	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	160.899004956272	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACGTCCTTTTGCTCAC	NA	False	NA	19	True	AATAAA	-21	NA	68400629	68533794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_68400939_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_119995_720	chr3	+	2121	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	36	-1	36	0	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	False	NA	22	True	AATAAA	-24	NA	68401576	68533797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_119998_45	chr3	+	2320	7	ISM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	26061	22	36	-4	3prime_fragment	FALSE	canonical	3	341	junction_1	53.0830062784273	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATACGTCCTTTTGCTC	NA	False	NA	17	True	AATAAA	-19	NA	68401576	68533792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_119999_48	chr3	+	2191	7	ISM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	165	4	165	-4	3prime_fragment	FALSE	canonical	3	341	junction_1	53.0830062784273	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATACGTCCTTTTGCTC	NA	False	NA	17	True	AATAAA	-19	NA	68401705	68533792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_12000_1054	chr11	-	768	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	124	3616	-6	7	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	1054	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAAACCTCTCAAA	NA	False	NA	-24	True	AATATA	-17	NA	22932258	22849751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_22850058_22906410_22906693_22932078
Isoform_120007_167	chr3	+	1562	7	FSM	ENSMUSG00000027777.16	ENSMUST00000170788.9	1730	7	168	0	168	0	multi-exon	FALSE	canonical	3	114	junction_1	136.891684675634	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	False	NA	22	True	AATAAA	-24	NA	68479745	68533797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_68479997_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_120024_1163	chr3	+	4063	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	252	1	-1	-1	multi-exon	FALSE	canonical	3	521	junction_3	142.05353233605	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAAGTTTCCTGTTTTA	NA	False	NA	19	True	TATAAA	-20	NA	68912322	68941955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
Isoform_120027_20	chr3	+	4173	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	141	2	-91	-2	multi-exon	FALSE	canonical	3	521	junction_3	142.05353233605	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68912211	68941954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
Isoform_120034_19	chr3	+	4088	24	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	204.478940360712	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAAGTTTCCTGTTTTA	NA	False	NA	19	True	TATAAA	-20	NA	68912322	68941955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_68912449_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
Isoform_120067_96	chr3	+	3793	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-5	5629	-5	2074	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTTGGGTGAAGAAAAA	1769	False	NA	4	True	AATAAA	-16	NA	69224188	69462506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
Isoform_120069_3	chr3	+	4113	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-329	5633	-329	2070	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATGTTTGGGTGAAGA	1445	False	NA	0	True	AATAAA	-12	NA	69223864	69462502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
Isoform_12007_4	chr11	-	2962	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	56	5	-44	-3	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGGGCACTGAAATCC	NA	False	NA	NA	False	AATAAA	-10	NA	23447974	23438551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
Isoform_120070_7	chr3	+	3894	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-112	5635	-112	2068	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAAATGTTTGGGTGAA	1662	False	NA	-2	True	AATAAA	-10	NA	69224081	69462500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
Isoform_120075_14	chr3	+	4631	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-35	4821	-35	2882	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTAGTTCCTGAGACCTG	1739	False	NA	NA	False	AATAAA	-24	NA	69224158	69463314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
Isoform_120076_5	chr3	+	6750	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-5	2672	-5	-2672	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCGCCTTTGCACAA	1769	False	NA	NA	False	AATACA	-24	NA	69224188	69465463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
Isoform_120077_3	chr3	+	9421	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-18	14	-18	-14	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCCTACTATTCTTTTC	1756	False	NA	11	True	AATAAA	-45	NA	69224175	69468121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
Isoform_12008_108	chr11	-	1778	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	56	1189	-44	-153	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	NA	False	NA	-4	True	AATAAA	-20	NA	23447974	23439735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
Isoform_120080_884	chr3	+	1758	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	48	7329	1	2	multi-exon	FALSE	canonical	3	839	junction_3	66.7311687960648	884	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTGTGAAGGTTTCA	NA	False	NA	13	True	AATAAA	-23	NA	69629365	69656377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
Isoform_120092_4	chr3	+	3015	9	FSM	ENSMUSG00000027834.16	ENSMUST00000029423.9	4091	9	-12	1088	-12	-1088	multi-exon	FALSE	canonical	3	8	junction_2	2.1650635094611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGGAACTTTTAATCT	NA	False	NA	2	True	ATTAAA	-18	NA	75464841	75549714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_75464950_75520386_75520655_75521760_75521992_75523874_75524070_75526425_75526631_75531165_75531264_75545224_75545312_75547555_75547646_75547981
Isoform_120093_8	chr3	+	2947	9	FSM	ENSMUSG00000027834.16	ENSMUST00000029423.9	4091	9	0	1144	0	-1144	multi-exon	FALSE	canonical	3	8	junction_2	2.1650635094611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTATGTGATGTCCCA	NA	False	NA	6	True	AATAAA	-17	NA	75464853	75549658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_75464950_75520386_75520655_75521760_75521992_75523874_75524070_75526425_75526631_75531165_75531264_75545224_75545312_75547555_75547646_75547981
Isoform_120099_1129	chr3	+	1732	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	17	3	17	-3	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGATGTCCTTTC	NA	False	NA	26	True	AATAAA	-16	NA	79498688	79510954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
Isoform_120100_106	chr3	+	1855	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	53	-156	53	156	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAAGTTTTATTTATG	NA	False	NA	NA	False	AATAAA	-17	NA	79498724	79511113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
Isoform_120101_1531	chr3	+	1331	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	53	368	53	6	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTTTAAAATGTTTGT	NA	False	NA	22	True	AATAAA	-21	NA	79498724	79510589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
Isoform_120103_112	chr3	+	3750	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	38	-11	15	11	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAATGTTTGTCTGCA	NA	False	NA	27	True	AATAAA	-26	NA	79498686	79510594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
Isoform_120104_42	chr3	+	4073	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	76	-372	53	-2	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGGATGTCCTTTCC	NA	False	NA	27	True	AATAAA	-17	NA	79498724	79510955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
Isoform_12012_6	chr11	-	1842	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	-8	1189	-8	-153	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	NA	False	NA	-4	True	AATAAA	-20	NA	23448038	23439735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
Isoform_120122_184	chr3	+	1943	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	25	2	25	-2	multi-exon	FALSE	canonical	3	150	junction_1	0	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCGTTTCTTTAGACT	4394	False	NA	NA	False	AATAAA	-12	NA	79536410	79540125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_79536664_79538435
Isoform_120124_14	chr3	+	3847	5	FSM	ENSMUSG00000027955.17	ENSMUST00000118853.8	6729	5	-16	2898	-16	-2896	multi-exon	FALSE	canonical	0	0	junction_1	2.77263412660235	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCTCATCTCCTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	79791823	79850689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_79791998_79793294_79794438_79815895_79816111_79843901_79844129_79848601
Isoform_120127_15	chr3	+	2981	7	FSM	ENSMUSG00000028019.10	ENSMUST00000129285.8	2818	7	-165	2	-165	-2	multi-exon	FALSE	canonical	3	14	junction_2	32.8705372974374	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTAAGTGTTCGTCTAA	NA	False	NA	38	True	AATAAA	-23	NA	80944313	81121339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_80944862_81038324_81038384_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
Isoform_120128_4	chr3	+	3345	7	FSM	ENSMUSG00000028019.10	ENSMUST00000129285.8	2818	7	-531	4	225	-4	multi-exon	FALSE	canonical	3	14	junction_2	32.8705372974374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGTAAGTGTTCGTCT	NA	False	NA	36	True	AATAAA	-21	NA	80943947	81121337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_80944862_81038324_81038384_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
Isoform_120129_8	chr3	+	3039	7	FSM	ENSMUSG00000028019.10	ENSMUST00000129285.8	2818	7	-224	3	-224	-3	multi-exon	FALSE	canonical	3	14	junction_2	32.8705372974374	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTAAGTGTTCGTCTA	NA	False	NA	37	True	AATAAA	-22	NA	80944254	81121338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_80944862_81038324_81038384_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
Isoform_120130_55	chr3	+	2909	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	603	9	-153	-3	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTAAGTGTTCGTCTA	NA	False	NA	37	True	AATAAA	-22	NA	80944325	81121338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
Isoform_120134_9	chr3	+	3310	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	204	7	204	-1	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTAAGTGTTCGTCTAAG	NA	False	NA	39	True	AATAAA	-24	NA	80943926	81121340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
Isoform_120137_37	chr3	+	2956	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	557	8	-199	-2	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTAAGTGTTCGTCTAA	NA	False	NA	38	True	AATAAA	-23	NA	80944279	81121339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
Isoform_120139_9	chr3	+	6091	14	FSM	ENSMUSG00000033900.14	ENSMUST00000091014.10	6218	14	125	2	10	-2	multi-exon	TRUE	canonical	0	0	junction_6	2.99111109157286	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGGTAACTGACGTTT	NA	False	NA	3	True	AATAAA	-15	NA	82265503	82302573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_82265563_82266281_82266432_82267196_82267282_82270597_82270922_82278485_82278710_82281414_82281509_82284229_82284475_82286243_82286315_82287384_82287554_82289200_82289291_82290514_82290677_82290822_82290969_82291151_82291285_82298434
Isoform_120141_3	chr3	+	2084	9	FSM	ENSMUSG00000033860.14	ENSMUST00000194175.2	1741	9	-2	-341	-2	-3	multi-exon	FALSE	canonical	3	22	junction_4	1.69096865730859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGACATTCCGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	82915165	82922353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444
Isoform_120142_6	chr3	+	1749	9	FSM	ENSMUSG00000033860.14	ENSMUST00000194175.2	1741	9	0	-8	0	8	multi-exon	FALSE	canonical	3	22	junction_4	1.69096865730859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACCTGTATATTTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	82915167	82922020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444
Isoform_120144_23	chr3	+	1561	10	FSM	ENSMUSG00000033860.14	ENSMUST00000048486.13	1695	10	136	-2	-1	2	multi-exon	FALSE	canonical	3	22	junction_4	1.8324913891634	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACATTCCGTGGCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	82915166	82922358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444_82921615_82922141
Isoform_120145_988	chr3	+	1771	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	17	63	7	3	multi-exon	FALSE	canonical	3	670	junction_6	49.0312790627637	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTTTATTTCTGAAA	NA	False	NA	27	True	AATAAA	-19	NA	82962845	82979599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
Isoform_120146_67	chr3	+	1798	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	-10	63	-10	3	multi-exon	TRUE	canonical	3	670	junction_6	49.0312790627637	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTTTATTTCTGAAA	NA	False	NA	27	True	AATAAA	-19	NA	82962818	82979599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
Isoform_120148_64	chr3	+	1828	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	23	0	-10	0	multi-exon	FALSE	canonical	3	670	junction_6	49.0312790627637	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCATGTTGAGGATTG	NA	False	NA	7	True	AATAAA	-40	NA	82962851	82979662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
Isoform_120156_24	chr3	+	2013	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	-12	2	-12	-2	multi-exon	FALSE	canonical	3	19	junction_1	5.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCTTCTGTCATGT	NA	False	NA	19	True	TATAAA	-22	NA	83673615	83681621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_83674351_83676632_83676714_83680424
Isoform_120158_6	chr3	+	1430	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	-42	615	-42	-615	multi-exon	FALSE	canonical	3	19	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTAGAACAGCTCGTT	NA	False	NA	NA	False	AATAAA	-19	NA	83673585	83681008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_83674351_83676632_83676714_83680424
Isoform_120165_58	chr3	+	5140	14	FSM	ENSMUSG00000028086.16	ENSMUST00000107679.8	4473	14	-668	1	-668	0	multi-exon	FALSE	canonical	3	30	junction_3	22.7195403737157	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGCCTGTTTCTTCCAC	NA	False	NA	24	True	AATAAA	-18	NA	84721906	84886504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
Isoform_120170_46	chr3	+	5056	13	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-649	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.8649580125115	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCGCCTGTTTCTTCCA	NA	False	NA	23	True	AATAAA	-17	NA	84721925	84886503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_84723077_84771270_84771319_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
Isoform_120171_7	chr3	+	5017	12	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-664	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.1137792421748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTATTGCGCCTGTTT	NA	False	NA	17	True	AATAAA	-11	NA	84721910	84886497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_84723077_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
Isoform_120176_8	chr3	+	3647	11	FSM	ENSMUSG00000028086.16	ENSMUST00000029727.8	2221	11	127	-1553	127	0	multi-exon	FALSE	canonical	2	9	junction_1	26.0516794084374	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	756	False	NA	25	True	AATAAA	-19	NA	84859579	84886505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_84859947_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
Isoform_120181_17	chr3	+	2301	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	-1	1169	-1	295	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAACTTCCACGTAAG	NA	False	NA	NA	False	AATAAA	-23	NA	85481424	85561760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
Isoform_120182_270	chr3	+	2002	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	9	1458	1	6	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCGTGGGTGCTTTGTA	NA	False	NA	15	True	AATAAA	-19	NA	85481434	85561471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
Isoform_120183_11	chr3	+	5211	22	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-4	-634	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	45.6890307223153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGACTACACTGCATT	NA	False	NA	11	True	AATAAA	-25	NA	85878411	86035783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_85878732_85948132_85948173_85982454_85982496_85986251_85986292_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
Isoform_120184_22	chr3	+	5700	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-11	1528	-11	-112	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGGGCCTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	85878404	86036305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
Isoform_120186_105	chr3	+	5171	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-4	2050	-4	-634	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGACTACACTGCATT	NA	False	NA	11	True	AATAAA	-25	NA	85878411	86035783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
Isoform_12019_5	chr11	-	2901	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	117	5	-8	-3	multi-exon	TRUE	canonical	3	225	junction_2	27.6394193137265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGGGCACTGAAATCC	NA	False	NA	NA	False	AATAAA	-10	NA	23447913	23438551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
Isoform_120198_30	chr3	+	1282	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	-4	249	-4	-2	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATGTATGTGCGGAG	NA	False	NA	NA	False	ATTAAA	-15	NA	86893853	86896838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
Isoform_120199_22	chr3	+	1533	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	-5	-1	-5	1	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTATTGTTTTATTAA	NA	False	NA	3	True	AATAAA	-15	NA	86893852	86897088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
Isoform_12020_4	chr11	-	2714	8	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-9	-154	intron_retention	FALSE	canonical	3	225	junction_2	28.0145734668692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGTGTGCTTTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	23447939	23439736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23443394_23444978_23445065_23446690_23446882_23447774
Isoform_120200_4	chr3	+	1687	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	-14	-146	-14	146	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAATTAACAC	NA	False	NA	NA	False	AATAAA	-31	NA	86893843	86897233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
Isoform_120202_5	chr3	+	2271	4	NIC	ENSMUSG00000041750.14	novel	1527	6	NA	NA	-5	1	intron_retention	FALSE	canonical	3	18	junction_1	21.9291789378647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTATTGTTTTATTAA	NA	False	NA	3	True	AATAAA	-15	NA	86893852	86897088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_86894013_86894294_86895863_86896457_86896555_86896642
Isoform_120203_39	chr3	+	5120	5	FSM	ENSMUSG00000003382.19	ENSMUST00000170036.8	5127	5	21	-14	-8	0	multi-exon	FALSE	canonical	3	20	junction_1	10.2072278312968	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATGTTTGCTGAGTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	87432905	87447463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530_87436647_87442817
Isoform_120205_35	chr3	+	5087	5	FSM	ENSMUSG00000003382.19	ENSMUST00000119109.8	5309	5	208	14	1	0	multi-exon	FALSE	canonical	3	12	junction_1	13.4605906259718	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAGAGTACTTAAA	NA	False	NA	NA	False	ATTAAA	-10	NA	87432921	87447449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87432967_87434567_87434624_87435176_87435415_87436530_87436647_87442817
Isoform_120208_3	chr3	+	4320	2	ISM	ENSMUSG00000041977.19	ENSMUST00000136072.8	2408	11	38	12536	5	-2241	intron_retention	FALSE	canonical	3	72	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	6190	False	NA	NA	False	NA	NA	NA	87524903	87593916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_87526100_87590792
Isoform_12021_4	chr11	-	3625	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-16	9	intron_retention	FALSE	canonical	3	225	junction_2	24.7655674946756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCGCCCAGAATGCTTGA	NA	False	NA	-9	True	AATAAA	-15	NA	23447946	23440417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23445065_23446690_23446882_23447774
Isoform_120210_5	chr3	+	6705	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-8	0	combination_of_known_splicesites	TRUE	canonical	3	35	junction_21	21.8596322932791	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6144	False	NA	12	True	AAGAAA	-13	NA	87524857	87645341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
Isoform_120211_9	chr3	+	6765	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	18.8502175978037	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6183	False	NA	12	True	AAGAAA	-13	NA	87524896	87645341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
Isoform_120212_4	chr3	+	6708	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-6	-93	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	18.8502175978037	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGGAAATGACTGTTTT	6146	False	NA	-82	True	NA	NA	NA	87524859	87645247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
Isoform_120213_4	chr3	+	6655	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	3	35	junction_36	20.1765064553401	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGGTTGTATGATTCT	6167	False	NA	15	True	AAGAAA	-16	NA	87524880	87645344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
Isoform_120215_3	chr3	+	6807	41	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_21	21.0653744329409	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTGTGGTTGTATG	6166	False	NA	10	True	AAGAAA	-11	NA	87524879	87645339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
Isoform_120219_3	chr3	+	6554	39	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-1	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	24.5779471226655	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGGAAATGACTGTTTT	6167	False	NA	-82	True	NA	NA	NA	87524880	87645247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609539_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
Isoform_120220_6	chr3	+	6711	40	NIC	ENSMUSG00000041977.19	novel	5603	39	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_20	19.5967231491748	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6147	False	NA	12	True	AAGAAA	-13	NA	87524860	87645341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
Isoform_120223_9	chr3	+	6649	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	17.5002967921014	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGTTGTATGATTCTT	6183	False	NA	16	True	AAGAAA	-17	NA	87524896	87645345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
Isoform_120226_4	chr3	+	6676	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_20	20.0595759618992	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGGTTGTATGATTC	6181	False	NA	14	True	AAGAAA	-15	NA	87524894	87645343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
Isoform_120228_9	chr3	+	6643	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	18.0509627892179	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6182	False	NA	12	True	AAGAAA	-13	NA	87524895	87645341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
Isoform_120229_4	chr3	+	6462	38	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-1	-66	combination_of_known_splicesites	FALSE	canonical	3	35	junction_35	19.4597597574427	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTATACTCTTATT	6167	False	NA	-55	True	NA	NA	NA	87524880	87645274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
Isoform_12024_133	chr11	-	4129	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	2	-3	2	3	multi-exon	FALSE	canonical	3	83	junction_12	9.91208520476776	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTGGAGAAAGTCCC	NA	False	NA	-12	True	AATAAA	-12	NA	23583629	23523784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
Isoform_120240_4583	chr3	+	2194	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	50	1	50	-1	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	4583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87813677	87823438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
Isoform_120242_397	chr3	+	2269	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	-25	1	-25	-1	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87813602	87823438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
Isoform_120269_77	chr3	+	899	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	-19	235	8	-225	multi-exon	FALSE	canonical	3	127	junction_1	351.330841230883	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCACACTACCCCTCT	NA	False	NA	40	True	AATAAA	-18	NA	87826850	87830744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_120270_17	chr3	+	1133	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	-25	7	2	3	multi-exon	FALSE	canonical	3	127	junction_1	351.330841230883	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAGTCTTAAAAGCTT	NA	False	NA	19	True	AATAAA	-21	NA	87826844	87830972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_120272_43	chr3	+	993	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	7	-212	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	348.953992510315	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGCCTCTCCCAAGT	NA	False	NA	53	True	AATAAA	-31	NA	87826849	87830757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87827013_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_120276_182	chr3	+	951	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	37	238	7	-228	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826849	87830741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_120279_17	chr3	+	1001	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	-13	238	-13	-228	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826799	87830741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_12028_5	chr11	-	4663	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	2	-537	2	0	multi-exon	TRUE	canonical	3	83	junction_12	9.91208520476776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCCAAACTTGGCA	NA	False	NA	NA	False	AATAAA	-13	NA	23583629	23523250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
Isoform_120280_27	chr3	+	1181	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	38	7	8	3	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAGTCTTAAAAGCTT	NA	False	NA	19	True	AATAAA	-21	NA	87826850	87830972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_120282_301	chr3	+	914	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	197	228	140	-228	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87827009	87830741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_120283_182	chr3	+	1074	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	37	228	7	-228	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826849	87830741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_120284_26	chr3	+	1304	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	38	-3	8	3	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAGTCTTAAAAGCTT	NA	False	NA	19	True	AATAAA	-21	NA	87826850	87830972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_120285_39	chr3	+	1145	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	197	-3	140	3	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAGTCTTAAAAGCTT	NA	False	NA	19	True	AATAAA	-21	NA	87827009	87830972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_12029_4	chr11	-	4168	23	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	32.9210488068873	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAATTGTGGAGAAAGT	NA	False	NA	-15	True	AATAAA	-9	NA	23583633	23523787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23581517_23581556_23583492
Isoform_120294_1070	chr3	+	2900	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	-6	-1	-6	1	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	False	NA	32	True	NA	NA	NA	87837614	87847994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
Isoform_120296_147	chr3	+	2964	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	-72	1	-72	-1	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATGTGTATGTGTGTG	NA	False	NA	30	True	NA	NA	NA	87837548	87847992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
Isoform_12030_10	chr11	-	2039	16	ISM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	-23	14853	-15	-12011	5prime_fragment	FALSE	canonical	3	83	junction_6	9.9643810088178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAGTAATTAAAATCAA	NA	False	NA	NA	False	AAGAAA	-10	NA	23583654	23538640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
Isoform_120302_23	chr3	+	3201	4	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	165.235858362793	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	False	NA	32	True	NA	NA	NA	87837614	87847994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_87837919_87838336_87839583_87845880_87846082_87846544
Isoform_120303_18	chr3	+	3110	5	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	172.954293095026	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	False	NA	32	True	NA	NA	NA	87837613	87847994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_87837919_87838336_87838546_87838637_87839583_87845880_87846082_87846544
Isoform_120305_26	chr3	+	3619	3	NIC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-6	1	intron_retention	FALSE	canonical	3	350	junction_1	11	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	False	NA	32	True	NA	NA	NA	87837614	87847994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87839583_87845880_87846082_87846544
Isoform_120314_22	chr3	+	897	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	30	4	30	-4	multi-exon	FALSE	canonical	3	31	junction_1	3.29983164553722	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTCTGTGGCTCCC	8861	False	NA	4	True	ATTAAA	-15	NA	87856002	87860679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
Isoform_120318_31	chr3	+	6139	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	-14	1	1	-1	multi-exon	FALSE	canonical	3	22	junction_3	1.4142135623731	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGGCTGCTTTCTTCT	NA	False	NA	9	True	AATAAA	-19	NA	87878385	87887757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
Isoform_12032_3	chr11	-	1035	7	NIC	ENSMUSG00000042208.16	novel	1279	10	NA	NA	0	-3305	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	42.4947709201445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGATGACTTAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	23583631	23565134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_23565257_23567137_23567197_23570228_23570468_23574935_23575123_23578872_23579032_23581204_23581335_23583492
Isoform_120322_23	chr3	+	1766	9	FSM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	-2	4	-2	-1	multi-exon	FALSE	canonical	3	12	junction_2	81.6783898898601	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTCTTTGTTTTGTTT	1717	False	NA	35	True	TTTAAA	-24	NA	87950412	87963296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87950487_87950773_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
Isoform_120323_3	chr3	+	2906	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	1	-1277	0	1274	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGTCTGAATCCAGGCC	1720	False	NA	NA	False	AGTAAA	-18	NA	87950415	87964574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
Isoform_120324_12	chr3	+	1693	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	1	-64	0	61	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATCCAGGCATCTTT	1720	False	NA	100	True	NA	NA	NA	87950415	87963361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
Isoform_120328_174	chr3	+	1630	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	1	-1	0	1	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTGTTTTGTTTTT	1720	False	NA	37	True	TTTAAA	-26	NA	87950415	87963298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
Isoform_120330_136	chr3	+	5713	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	42	1	-7	-1	multi-exon	FALSE	canonical	3	183	junction_11	23.9826757536325	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGCGTTGTTGCTATA	NA	False	NA	18	True	AATAAA	-19	NA	87989319	88028354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
Isoform_120331_247	chr3	+	5684	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	71	1	14	-1	multi-exon	FALSE	canonical	3	183	junction_11	23.9826757536325	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGCGTTGTTGCTATA	NA	False	NA	18	True	AATAAA	-19	NA	87989348	88028354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
Isoform_120333_10	chr3	+	5513	37	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	44.0248509367153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989352	88028355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
Isoform_12034_106	chr11	-	1751	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	52	2343	52	634	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCAGTGTTGAATTT	NA	False	NA	-3	True	AATAAA	-29	NA	23615907	23598821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
Isoform_120351_24	chr3	+	5692	10	FSM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-46	-2158	-2	2	multi-exon	FALSE	canonical	3	119	junction_9	15.3260852434302	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGGTTTTGATTTC	6536	False	NA	19	True	ATTAAA	-31	NA	88049676	88079395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
Isoform_120352_36	chr3	+	3526	10	FSM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-35	-3	9	3	multi-exon	FALSE	canonical	3	119	junction_9	15.3260852434302	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGATTCTTCTGCTGTG	6547	False	NA	25	True	NA	NA	NA	88049687	88077240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
Isoform_120355_25	chr3	+	3243	11	FSM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	-2	2160	-2	-4	multi-exon	FALSE	canonical	3	49	junction_10	33.5177564881661	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACAGATGAGATTCTTC	6536	False	NA	18	True	NA	NA	NA	88049676	88077233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
Isoform_120356_12	chr3	+	5402	11	FSM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	-14	13	-14	-13	multi-exon	FALSE	canonical	3	49	junction_10	33.5177564881661	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGATACCTCAGT	6524	False	NA	4	True	ATTAAA	-16	NA	88049664	88079380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
Isoform_120359_3	chr3	+	2894	10	NIC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	42.4185494015688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGAGATTCTTCTGCTG	6583	False	NA	23	True	NA	NA	NA	88049723	88077238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
Isoform_12036_328	chr11	-	1712	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	91	2343	-16	634	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCAGTGTTGAATTT	NA	False	NA	-3	True	AATAAA	-29	NA	23615868	23598821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
Isoform_120361_3	chr3	+	2012	10	Fusion	ENSMUSG00000097428.2_ENSMUSG00000001419.18	novel	3488	10	NA	NA	15	-1	multi-exon	FALSE	canonical	0	0	junction_9	49.4415729503266	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTTGTGTATTTATTT	6553	False	NA	NA	False	AATAAA	-17	NA	88049693	88110787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88110399
Isoform_120368_7638	chr3	+	1937	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	40	0	3	0	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	7638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3844	False	NA	23	True	ATTAAA	-15	NA	88204462	88229074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
Isoform_120370_106	chr3	+	1888	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	11	78	1	-75	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCACTGACACGTATCT	3815	False	NA	-55	True	NA	NA	NA	88204433	88228996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
Isoform_120403_812	chr3	+	1542	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	37	2640	0	92	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATTTGTGAGTCTTT	4032	False	NA	9	True	TTTAAA	-19	NA	88232366	88235980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
Isoform_120404_1147	chr3	+	1506	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	26	2687	-6	45	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATTTCCAGTCTCTCTT	4021	False	NA	11	True	AATAGA	-14	NA	88232355	88235933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
Isoform_12042_14	chr11	-	2519	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	29	1598	29	1379	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAACAGCTGTGGGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	23615930	23598076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
Isoform_120421_16	chr3	+	4369	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	77.214898753862	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243603	88269645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_88243805_88249164_88249264_88249747_88249830_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
Isoform_120422_21	chr3	+	1133	5	ISM	ENSMUSG00000001415.11	ENSMUST00000192057.6	3119	12	-14	6815	-14	-1682	5prime_fragment	FALSE	canonical	3	289	junction_3	7.49583217528247	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88243603	88253221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669
Isoform_120424_25	chr3	+	4442	22	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	0	intron_retention	FALSE	canonical	3	5	junction_7	79.1884860729804	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243603	88269645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256417_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
Isoform_120428_906	chr3	+	4420	22	FSM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	28	0	-23	0	multi-exon	FALSE	canonical	3	253	junction_5	44.0686436309756	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243594	88269645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
Isoform_120431_16	chr3	+	5791	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	253	junction_5	44.1385319194012	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243603	88269644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
Isoform_12045_11	chr11	-	3728	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	53	365	53	-365	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTTTTAAGATTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	23615906	23596843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
Isoform_120459_3	chr3	+	5600	2	FSM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	175	3	175	-3	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTTGTCTTTCACTGT	NA	False	NA	14	True	ATTAAA	-44	NA	88439876	88448700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88440156_88443379
Isoform_120461_3	chr3	+	4174	2	FSM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	-387	1991	-387	-1991	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGGGTTTATGTTCTTT	NA	False	NA	NA	False	AATATA	-1	NA	88439314	88446712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88440156_88443379
Isoform_120467_4134	chr3	+	3352	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	-23	1	-23	-1	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	4134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6082	False	NA	NA	False	AATAAA	-25	NA	88461041	88477031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
Isoform_120468_86	chr3	+	3386	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	-56	0	-56	0	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6049	False	NA	NA	False	AATAAA	-26	NA	88461008	88477032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
Isoform_12047_36	chr11	-	3689	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	91	366	-16	-366	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTTTTTTAAGATTA	NA	False	NA	NA	False	ATTAAA	-15	NA	23615868	23596844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
Isoform_120476_93	chr3	+	4331	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	1295	junction_7	121.63312576741	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6139	False	NA	NA	False	AATAAA	-25	NA	88461098	88477031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
Isoform_120505_54	chr3	+	1384	9	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	123	junction_2	2287.5892571384	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	NA	False	NA	14	True	AATAAA	-16	NA	88483231	88495725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88483288_88483545_88483689_88483806_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
Isoform_12051_3	chr11	-	7502	10	FSM	ENSMUSG00000020275.10	ENSMUST00000102864.5	7466	10	-36	0	-36	0	multi-exon	FALSE	canonical	0	0	junction_6	1.22726233524303	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTTACAGTTTTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	23721006	23686846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23693041_23694238_23694308_23694436_23694506_23695428_23695642_23695745_23695851_23698750_23698892_23703216_23703309_23706898_23707048_23711012_23711156_23720679
Isoform_12052_284	chr11	-	3756	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	-11	2	-11	-2	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTTTAATTTT	1258	False	NA	-3	True	TTTAAA	-6	NA	23845264	23812647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
Isoform_120524_3682	chr3	+	1056	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	0	3	0	-3	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	3682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTTTGTCTTGCGT	3557	False	NA	12	True	AATAAA	-14	NA	88486914	88495723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
Isoform_120527_69	chr3	+	1168	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	18	3	18	-3	multi-exon	FALSE	canonical	3	4285	junction_2	286.022180083993	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTTTGTCTTGCGT	3638	False	NA	12	True	AATAAA	-14	NA	88486995	88495723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
Isoform_120528_235	chr3	+	1035	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	155	-1	155	1	multi-exon	FALSE	canonical	3	4285	junction_2	286.022180083993	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	3775	False	NA	16	True	AATAAA	-18	NA	88487132	88495727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
Isoform_120539_24	chr3	+	4262	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	63	0	intron_retention	FALSE	canonical	3	121	junction_5	65.9201871537101	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	8681	False	NA	13	True	ATTAAA	-15	NA	88522736	88555357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120542_54	chr3	+	4278	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	54	1	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	8672	False	NA	14	True	ATTAAA	-16	NA	88522727	88555358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120544_18	chr3	+	4349	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-17	1	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	8601	False	NA	14	True	ATTAAA	-16	NA	88522656	88555358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120550_17	chr3	+	3308	23	FSM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	56	602	56	1	multi-exon	FALSE	canonical	3	97	junction_1	70.6950294581072	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTGCTGATTGTCCTT	9450	False	NA	10	True	AGTAAA	-16	NA	88523505	88554237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120551_25	chr3	+	4401	23	FSM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	84	-519	84	1	multi-exon	FALSE	canonical	3	97	junction_1	70.6950294581072	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	9478	False	NA	14	True	ATTAAA	-16	NA	88523533	88555358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120554_84	chr3	+	4406	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	84	2	84	0	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	9478	False	NA	13	True	ATTAAA	-15	NA	88523533	88555357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_12056_36	chr11	-	1821	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	30.8175635348128	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTTTTAAGCATTCCA	NA	False	NA	-6	True	AATAAA	-29	NA	26543647	26421402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543385
Isoform_120561_31	chr3	+	4276	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88528430	88555359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120563_34	chr3	+	3122	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	16	-1	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAACTGCTGATTGTCC	NA	False	NA	8	True	AGTAAA	-14	NA	88528460	88554235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120565_32	chr3	+	4246	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	14	0	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	13	True	ATTAAA	-15	NA	88528458	88555357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120568_68	chr3	+	4287	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	12	1	-7	1	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	NA	False	NA	14	True	ATTAAA	-16	NA	88528424	88555358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120569_63	chr3	+	4230	23	NNC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	17	1	intron_retention	FALSE	non_canonical	0	0	junction_22	79.9630208955602	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	NA	False	NA	14	True	ATTAAA	-16	NA	88528461	88555358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096_88555148_88555167
Isoform_12057_4	chr11	-	1888	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-92	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	30.8175635348128	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTTTTAAGCATTCCA	NA	False	NA	-6	True	AATAAA	-29	NA	26543714	26421402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543385
Isoform_120575_11	chr3	+	3120	22	FSM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	1	1117	1	2	multi-exon	FALSE	canonical	3	33	junction_1	79.8674923015028	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	NA	False	NA	11	True	AGTAAA	-17	NA	88528743	88554238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120576_10	chr3	+	4239	22	FSM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	1	-2	1	0	multi-exon	FALSE	canonical	3	33	junction_1	79.8674923015028	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	13	True	ATTAAA	-15	NA	88528743	88555357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_120578_18	chr3	+	4221	22	FSM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	170	-1	2	1	multi-exon	FALSE	canonical	3	33	junction_1	68.5955314781911	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	NA	False	NA	14	True	ATTAAA	-16	NA	88528768	88555358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_12059_47	chr11	-	1616	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	274	-1	-24	1	multi-exon	FALSE	canonical	3	73	junction_12	13.1368332899862	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTTTTAAGCATTCCA	NA	False	NA	-6	True	AATAAA	-29	NA	26543646	26421402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
Isoform_120595_10	chr3	+	2751	9	ISM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	-14	-97	5	97	intron_retention	FALSE	canonical	3	344	junction_7	29.8158410077596	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAAATTAAAAAA	-5	True	NA	NA	False	NA	NA	NA	88593125	88609017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257
Isoform_120597_14	chr3	+	2504	10	FSM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	-19	-97	0	97	multi-exon	FALSE	canonical	3	344	junction_7	30.6195289897731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAAATTAAAAAA	-10	True	NA	NA	False	NA	NA	NA	88593120	88609017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567
Isoform_120598_25	chr3	+	3672	13	ISM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	17	69	6	1	intron_retention	FALSE	canonical	3	322	junction_11	32.668367302671	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCATTTCTCTTTTTC	-4	True	NA	14	True	AATAAA	-15	NA	88593126	88620162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067
Isoform_12060_3	chr11	-	1611	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	27.6777086399065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTTTAAGCATTCCAT	NA	False	NA	-5	True	AATAAA	-30	NA	26544004	26421401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543953
Isoform_120600_393	chr3	+	2894	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	17	70	6	0	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-4	True	NA	13	True	AATAAA	-14	NA	88593126	88620161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
Isoform_120601_251	chr3	+	2976	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	13	-8	2	8	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATTGTTGTTTTTTT	-8	True	NA	24	True	AATAAA	-24	NA	88593122	88620239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
Isoform_120605_40	chr3	+	3643	13	FSM	ENSMUSG00000028060.15	ENSMUST00000199684.5	3636	13	-7	0	6	0	multi-exon	FALSE	canonical	3	104	junction_11	83.5129730441125	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-4	True	NA	13	True	AATAAA	-14	NA	88593126	88620161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067
Isoform_120606_23	chr3	+	2971	14	FSM	ENSMUSG00000028060.15	ENSMUST00000198042.5	2567	14	-35	-369	-11	7	multi-exon	FALSE	canonical	3	104	junction_11	80.4603618093109	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	-3	True	NA	23	True	AATAAA	-23	NA	88593098	88620238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
Isoform_120607_29	chr3	+	2849	14	FSM	ENSMUSG00000028060.15	ENSMUST00000198042.5	2567	14	10	-292	0	0	multi-exon	FALSE	canonical	3	104	junction_11	80.4603618093109	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	13	False	NA	13	True	AATAAA	-14	NA	88593143	88620161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
Isoform_120608_9	chr3	+	4661	12	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-11	4	intron_retention	FALSE	canonical	3	344	junction_7	27.8348138040141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTGCATTGTTGTTT	-3	True	NA	20	True	AATAAA	-20	NA	88593098	88620235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88617250_88618067
Isoform_120609_9	chr3	+	4562	12	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	344	junction_7	27.8348138040141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-7	True	NA	13	True	AATAAA	-14	NA	88593123	88620161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88617250_88618067
Isoform_120613_14	chr3	+	2762	14	NIC	ENSMUSG00000028060.15	novel	2567	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	117.891435365528	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-1	True	NA	13	True	AATAAA	-14	NA	88593129	88620161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
Isoform_120618_10	chr3	+	3547	13	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-2	0	intron_retention	FALSE	canonical	2	9	junction_9	129.536004218475	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-12	True	NA	13	True	AATAAA	-14	NA	88593118	88620161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671_88607822_88616086_88616249_88617164_88617250_88618067
Isoform_120619_9	chr3	+	2748	14	NIC	ENSMUSG00000028060.15	novel	2567	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	124.465912255563	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	10	True	NA	13	True	AATAAA	-14	NA	88593140	88620161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
Isoform_12062_90	chr11	-	1531	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	118	15	-3	-15	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAACAAAATTTTG	NA	False	NA	NA	False	AATAAA	-4	NA	29197291	29171546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
Isoform_120628_5	chr3	+	2509	6	FSM	ENSMUSG00000028057.15	ENSMUST00000172333.8	993	6	-22	-1494	1	1	multi-exon	FALSE	canonical	2	5	junction_2	24.0881713710277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGTGTCAGATTTTTT	2256	False	NA	NA	False	AATACA	-10	NA	88624183	88638349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88624265_88624632_88624778_88624879_88624966_88633301_88633376_88633586_88633779_88636418
Isoform_120629_20	chr3	+	2485	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	39	-1320	1	-2	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCAGATTTTTTTTTTA	2256	False	NA	NA	False	AATACA	-15	NA	88624183	88638354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
Isoform_12063_102	chr11	-	1254	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	118	292	-3	-292	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGACTGTTAGTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	29197291	29171823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
Isoform_120630_50	chr3	+	1103	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	39	62	1	-62	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGTACCGTGTGCA	2256	False	NA	12	True	NA	NA	NA	88624183	88636972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
Isoform_120631_7	chr3	+	5295	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	38	-4129	0	2807	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCCTGTTAATTTG	2255	False	NA	NA	False	NA	NA	NA	88624182	88641163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
Isoform_120633_3	chr3	+	2622	5	NIC	ENSMUSG00000028057.15	novel	1204	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	56	junction_3	7.24568837309472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGATTTTTTTTTTAAC	2252	False	NA	NA	False	AATACA	-17	NA	88624179	88638356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88624265_88624632_88624966_88633301_88633376_88633586_88633779_88636418
Isoform_120637_3	chr3	+	1285	3	ISM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	48424	-744	48424	744	3prime_fragment	FALSE	canonical	3	272	junction_2	41	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTATACCTACTTTT	NA	False	NA	NA	False	NA	NA	NA	88730946	88733638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_88731105_88731656_88731842_88732696
Isoform_120648_51	chr3	+	1844	12	ISM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-24	950	-1	0	5prime_fragment	FALSE	canonical	3	250	junction_3	91.6433979984058	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTACACTTTAATGTGG	NA	False	NA	5	True	AATAAA	-19	NA	89072122	89083278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
Isoform_120650_259	chr3	+	2136	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-24	0	-1	0	multi-exon	FALSE	canonical	3	250	junction_3	89.4627094877463	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072122	89084228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_120653_15	chr3	+	2380	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-24	-244	-1	244	multi-exon	FALSE	canonical	3	250	junction_3	89.4627094877463	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGAAGTTATGCCCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89072122	89084472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_120657_25	chr3	+	2911	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	-1	1	multi-exon	FALSE	canonical	3	36	junction_12	330.503695169624	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89072122	89090071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_120659_13	chr3	+	2483	12	NIC	ENSMUSG00000068917.13	novel	2112	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	250	junction_3	93.3379180298595	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072121	89084228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_120660_24	chr3	+	1842	12	ISM	ENSMUSG00000068917.13	ENSMUST00000121212.9	2154	13	20	950	-2	0	5prime_fragment	FALSE	canonical	3	173	junction_3	109.540211115552	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTACACTTTAATGTGG	NA	False	NA	5	True	AATAAA	-19	NA	89072121	89083278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
Isoform_120662_209	chr3	+	2133	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121212.9	2154	13	21	0	-1	0	multi-exon	FALSE	canonical	3	173	junction_3	106.020045274467	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072122	89084228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_12067_11	chr11	-	991	3	FSM	ENSMUSG00000032673.6	ENSMUST00000133103.2	2126	3	14	1121	14	-2	multi-exon	FALSE	canonical	3	43	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTGTGTCTTTAATT	NA	False	NA	-3	True	AATAAA	-21	NA	29465017	29462877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_29463677_29464431_29464523_29464916
Isoform_120672_58	chr3	+	2033	12	FSM	ENSMUSG00000068917.13	ENSMUST00000128318.8	1885	12	-151	3	9	-1	multi-exon	FALSE	canonical	3	39	junction_3	144.088987655672	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072134	89084225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_120675_12	chr3	+	2824	12	NIC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	370	junction_2	63.7556025734534	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072125	89084228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89072414_89074341_89074512_89076001_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_120676_16	chr3	+	2880	10	ISM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	-3	949	-1	-1	5prime_fragment	FALSE	canonical	3	370	junction_2	63.4017174670985	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTACACTTTAATGTG	NA	False	NA	4	True	AATAAA	-18	NA	89072122	89083277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
Isoform_120678_95	chr3	+	3172	11	FSM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	-3	-1	-1	1	multi-exon	FALSE	canonical	3	370	junction_2	65.9302661908778	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072122	89084227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_120680_42	chr3	+	2133	13	NIC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_2	130.727664333997	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072122	89084228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89072414_89074341_89074512_89076004_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_120684_35	chr3	+	2129	13	FSM	ENSMUSG00000068917.13	ENSMUST00000090927.12	2128	13	-2	1	-1	1	multi-exon	FALSE	canonical	3	115	junction_2	141.611043001596	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072122	89084227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89072414_89074341_89074512_89076004_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_120689_16	chr3	+	3170	11	NIC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	115	junction_2	127.746037120531	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072122	89084228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89072414_89074341_89074512_89076004_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_12069_132	chr11	-	900	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	16	2	14	-2	multi-exon	FALSE	canonical	3	382	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTGTGTCTTTAATT	NA	False	NA	-3	True	AATAAA	-21	NA	29465017	29462877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_29463677_29464916
Isoform_120691_516	chr3	+	1459	9	FSM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	15	1	9	1	multi-exon	FALSE	canonical	3	379	junction_2	249.13701049824	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89084811	89090071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_120694_861	chr3	+	1456	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	32	1	9	1	multi-exon	FALSE	canonical	3	743	junction_2	141.598022585063	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89084811	89090071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_120695_20	chr3	+	1510	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	-22	1	-22	1	multi-exon	TRUE	canonical	3	743	junction_2	141.598022585063	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89084757	89090071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_120696_18	chr3	+	2270	8	NIC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	9	1	intron_retention	FALSE	canonical	3	743	junction_2	151.227764430656	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89084811	89090071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_120703_34	chr3	+	3108	12	FSM	ENSMUSG00000032657.16	ENSMUST00000041913.13	3083	12	-27	2	-27	0	multi-exon	FALSE	canonical	3	16	junction_5	4.5924839782964	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1696	False	NA	7	True	AATAAA	-18	NA	89090482	89096596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
Isoform_120705_39	chr3	+	1950	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	-12	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	False	NA	3	True	ATTAAA	-13	NA	89110234	89115988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
Isoform_120707_293	chr3	+	1788	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	0	-9	0	7	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATCTGTGACTAAAGGA	NA	False	NA	10	True	ATTAAA	-20	NA	89110234	89115995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
Isoform_120708_24	chr3	+	1962	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	0	-183	0	-104	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGGAAGCTGTGCCT	NA	False	NA	20	True	NA	NA	NA	89110234	89116169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
Isoform_120709_11	chr3	+	5320	11	FSM	ENSMUSG00000028048.12_ENSMUSG00000105692.2	ENSMUST00000077367.11	1779	11	0	-3541	0	-944	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGACTTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	89110234	89119527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
Isoform_12071_6	chr11	-	2032	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	7	-1121	5	2	multi-exon	FALSE	canonical	3	382	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGGGGTTTATTTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	29465026	29461754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_29463677_29464916
Isoform_120711_5	chr3	+	5742	11	FSM	ENSMUSG00000028048.12_ENSMUSG00000105692.2	ENSMUST00000077367.11	1779	11	-5	-3958	-5	-527	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGATTTCCTCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	89110229	89119944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
Isoform_120712_5	chr3	+	2809	9	NIC	ENSMUSG00000028048.12	novel	1779	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	268	junction_1	28.5326019668729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCTATCTGTGACT	NA	False	NA	4	True	ATTAAA	-14	NA	89110234	89115989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89114759_89115130_89115295_89115618_89115736_89115823
Isoform_120713_5	chr3	+	3149	23	FSM	ENSMUSG00000028047.12	ENSMUST00000029682.11	3190	23	40	1	-7	-1	multi-exon	FALSE	canonical	0	0	junction_10	2.85061976732276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGCAATTGTTTATT	5817	False	NA	4	True	CATAAA	-18	NA	89122526	89134143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89122632_89123987_89124195_89124991_89125249_89125334_89125438_89126163_89126191_89126353_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
Isoform_120714_3	chr3	+	537	2	FSM	ENSMUSG00000028047.12	ENSMUST00000153129.2	455	2	-32	-50	-32	-1	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGCAATTGTTTATT	NA	False	NA	4	True	CATAAA	-18	NA	89133524	89134143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89133751_89133832
Isoform_120715_755	chr3	+	513	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	476	183	8	1	multi-exon	FALSE	canonical	3	1428	junction_1	178.055293378209	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7599	False	NA	21	True	AATAAA	-15	NA	89153748	89157030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
Isoform_120718_45	chr3	+	514	5	NIC	ENSMUSG00000042747.13	novel	1172	5	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	88	junction_1	756.677730278882	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7595	False	NA	21	True	AATAAA	-15	NA	89153744	89157030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89153823_89154087_89154240_89154371_89154436_89156380_89156448_89156877
Isoform_120719_80	chr3	+	544	5	NIC	ENSMUSG00000042747.13	novel	582	5	NA	NA	55	1	combination_of_known_splicesites	FALSE	canonical	3	225	junction_1	697.396945791993	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7646	False	NA	21	True	AATAAA	-15	NA	89153795	89157030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89153901_89154084_89154240_89154371_89154436_89156380_89156448_89156877
Isoform_120724_370	chr3	+	378	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	27	-1	27	1	multi-exon	FALSE	canonical	3	539	junction_1	0	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTGTAGTTTTGAGTA	6804	False	NA	18	True	ATTAAA	-19	NA	89173885	89174385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89173914_89174035
Isoform_120725_3	chr3	+	867	6	ISM	ENSMUSG00000109293.2	ENSMUST00000208216.2	2285	16	8673	-85	8673	85	3prime_fragment	FALSE	canonical	2	5	junction_5	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACACAAATATGAATCTTA	6047	False	NA	NA	False	AATAAA	-13	NA	89277954	89284941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_89278108_89278839_89278971_89279954_89280083_89280529_89280624_89280731_89280888_89284736
Isoform_120726_439	chr3	+	3169	13	FSM	ENSMUSG00000042626.14	ENSMUST00000191485.7	3154	13	-27	12	-27	0	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325830	89337322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_120728_576	chr3	+	3111	13	FSM	ENSMUSG00000042626.14	ENSMUST00000107417.9	3079	13	-32	0	11	0	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325888	89337322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_120733_35	chr3	+	3298	13	FSM	ENSMUSG00000042626.14	ENSMUST00000039110.12	3250	13	-50	2	-50	-2	multi-exon	TRUE	canonical	3	256	junction_1	89.6222008705928	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCGGCCTCTCAACTCC	NA	False	NA	18	True	ATTAAA	-15	NA	89325699	89337320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_120739_252	chr3	+	2943	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325888	89337322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_120740_42	chr3	+	2988	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325843	89337322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_120746_90	chr3	+	3104	13	NIC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	152.973558898988	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89328934	89337322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89329056_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_120747_666	chr3	+	3531	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	2	-916	2	0	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89328936	89337322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_12077_945	chr11	-	614	5	FSM	ENSMUSG00000020460.16	ENSMUST00000102844.4	637	5	23	0	23	0	multi-exon	FALSE	canonical	0	0	junction_3	5966.04937856703	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497837	29495845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680
Isoform_120777_9	chr3	+	2770	3	FSM	ENSMUSG00000047824.14	ENSMUST00000136573.8	584	3	199	-2385	-11	0	multi-exon	FALSE	canonical	3	4	junction_1	130	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337719	89342435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89337761_89338433_89338484_89339756
Isoform_120779_8	chr3	+	3150	3	NIC	ENSMUSG00000047824.14	novel	3198	3	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337722	89342435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89338037_89338326_89338484_89339756
Isoform_12078_147	chr6	+	543	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	-38	-34	-38	34	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATGCTG	NA	False	NA	-10	True	AATAAA	-16	NA	122433824	122434367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122433800_122434400
Isoform_120780_268	chr3	+	3020	3	FSM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	178	0	15	0	multi-exon	FALSE	canonical	3	239	junction_1	12.5	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337745	89342435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89338037_89338433_89338484_89339756
Isoform_120781_213	chr3	+	3042	3	FSM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	156	0	-7	0	multi-exon	FALSE	canonical	3	239	junction_1	12.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337723	89342435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89338037_89338433_89338484_89339756
Isoform_120785_6	chr3	+	3440	2	FSM	ENSMUSG00000047824.14	ENSMUST00000125830.2	688	2	-615	-2137	-7	1	multi-exon	FALSE	canonical	3	264	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGACTCCTTTGTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	89337723	89342436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89338484_89339756
Isoform_120787_11	chr3	+	4447	11	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-5	-10	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	22.5690052948729	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCCTCTAGCCTGGTTC	4411	False	NA	25	True	AATAAA	-14	NA	89344055	89358249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89344088_89346823_89346909_89350407_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
Isoform_120798_345	chr3	+	1158	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	32	4	32	0	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAGCTGGAGACTGAT	172	False	NA	17	True	AATAAA	-16	NA	89366456	89376316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
Isoform_12080_5460	chr11	-	544	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	247	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	5460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497862	29495845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
Isoform_120801_75	chr3	+	3764	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	32	5	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCACAGACAGTTCT	NA	False	NA	25	True	ATTAAA	-25	NA	89622360	89658718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_120802_29	chr3	+	5799	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTTACAAAGTTTTAT	NA	False	NA	12	True	AATAAA	-16	NA	89622360	89660753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_120804_9	chr3	+	4080	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	2	291	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGGGCAGGAGTTGACA	NA	False	NA	NA	False	CATAAA	-17	NA	89622330	89659004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_120805_129	chr3	+	3839	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	31	2039	31	1	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATATGTAGCACAGACAG	NA	False	NA	21	True	ATTAAA	-21	NA	89622359	89658714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_120807_77	chr3	+	5877	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	32	0	32	0	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTTACAAAGTTTTAT	NA	False	NA	12	True	AATAAA	-16	NA	89622360	89660753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_12081_96	chr11	-	594	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	197	0	-21	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497912	29495845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
Isoform_120811_6	chr3	+	2332	14	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	28	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	39.832043833782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATATGTAGCACAGACAG	NA	False	NA	21	True	ATTAAA	-21	NA	89622356	89658714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89622458_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_120813_7	chr3	+	3871	15	FSM	ENSMUSG00000027951.17	ENSMUST00000107405.6	5871	15	-37	2037	-37	3	multi-exon	FALSE	canonical	3	12	junction_1	32.9626411909864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTAGCACAGACAGTT	NA	False	NA	23	True	ATTAAA	-23	NA	89638017	89658716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_120814_10	chr3	+	3807	15	FSM	ENSMUSG00000027951.17	ENSMUST00000107405.6	5871	15	24	2040	24	0	multi-exon	FALSE	canonical	3	12	junction_1	32.9626411909864	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATATGTAGCACAGACA	NA	False	NA	20	True	ATTAAA	-20	NA	89638078	89658713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_120823_187	chr3	+	3077	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-6	6	-6	-6	multi-exon	FALSE	canonical	3	944	junction_1	76.7428968844819	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACCATGGGTTCATGT	NA	False	NA	NA	False	AATAAA	-37	NA	89680916	89691301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
Isoform_120826_478	chr3	+	1825	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-6	1258	-6	-2	multi-exon	FALSE	canonical	3	944	junction_1	76.7428968844819	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680916	89690049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
Isoform_120831_11	chr3	+	3167	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-96	6	-96	-6	multi-exon	FALSE	canonical	3	944	junction_1	76.7428968844819	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACCATGGGTTCATGT	NA	False	NA	NA	False	AATAAA	-37	NA	89680826	89691301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
Isoform_120832_30	chr3	+	1943	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-124	1258	-124	-2	multi-exon	TRUE	canonical	3	944	junction_1	76.7428968844819	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680798	89690049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
Isoform_120841_37	chr3	+	2530	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-147	3350	-147	-3350	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTGTGGTTTTTTT	2732	False	NA	NA	False	NA	NA	NA	89738529	89762791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
Isoform_120846_25	chr3	+	5907	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-172	-2	-172	2	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTCATTTGCTTTGT	2707	False	NA	25	True	AATAAA	-13	NA	89738504	89766143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
Isoform_120849_6	chr3	+	1093	6	FSM	ENSMUSG00000027942.18	ENSMUST00000029552.13	1080	6	-22	9	1	-9	multi-exon	FALSE	canonical	3	422	junction_3	34.2496715312717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-7	NA	89960121	89966395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048
Isoform_120851_14	chr3	+	1442	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	-30	-1	-2	1	multi-exon	FALSE	canonical	3	45	junction_6	165.248718267008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTGTTTGGGCTTTGT	NA	False	NA	NA	False	ATTAAA	-44	NA	89960118	89968302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
Isoform_120852_14	chr3	+	2874	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	-12	-1451	1	0	multi-exon	FALSE	canonical	3	45	junction_6	165.248718267008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCATTTCTTTAGAGTG	NA	False	NA	10	True	AATAAA	-20	NA	89960136	89969752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
Isoform_120853_263	chr3	+	1612	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	4	894	4	2	multi-exon	FALSE	canonical	3	422	junction_3	33.2549077413979	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTTCTTTAGAGTGGT	NA	False	NA	12	True	AATAAA	-22	NA	89960124	89969754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
Isoform_120854_25	chr3	+	1634	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	-18	894	-18	2	multi-exon	FALSE	canonical	3	422	junction_3	33.2549077413979	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTTCTTTAGAGTGGT	NA	False	NA	12	True	AATAAA	-22	NA	89960102	89969754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
Isoform_120856_9	chr3	+	1638	10	FSM	ENSMUSG00000118504.2	ENSMUST00000239076.2	1545	10	-89	-4	-89	4	multi-exon	FALSE	canonical	3	22	junction_7	192.823529633307	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGCTGGCAGGATGG	NA	False	NA	11	True	AATAAA	-20	NA	89960121	89973183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969240_89970515_89970557_89971731_89971862_89972816
Isoform_120857_7	chr3	+	1828	10	FSM	ENSMUSG00000118504.2	ENSMUST00000239076.2	1545	10	-86	-197	-86	0	multi-exon	FALSE	canonical	3	22	junction_7	192.823529633307	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTAGGCCACAGGGCTT	NA	False	NA	15	True	AAAAAG	-4	NA	89960124	89973376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969240_89970515_89970557_89971731_89971862_89972816
Isoform_120868_83	chr3	+	2150	9	NIC	ENSMUSG00000027940.19	novel	2190	9	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	65	junction_8	1429.67163515788	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGACCGGCTTGACTTT	NA	False	NA	14	True	AATAAA	-17	NA	89987001	90008204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90006834
Isoform_120871_3359	chr3	+	2099	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	126	5	1	0	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	3359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCAGACCGGCTTGACTT	NA	False	NA	13	True	AATAAA	-16	NA	89986972	90008203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
Isoform_120872_691	chr3	+	2197	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	28	5	28	0	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCAGACCGGCTTGACTT	NA	False	NA	13	True	AATAAA	-16	NA	89986874	90008203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
Isoform_120874_205	chr3	+	1930	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	3	297	3	-292	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTTTGAAGTTTTGTT	NA	False	NA	9	True	TTTAAA	-6	NA	89986849	90007911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
Isoform_120896_3	chr3	+	2628	19	ISM	ENSMUSG00000027939.12	ENSMUST00000029548.9	5681	40	32788	22378	32786	-22378	internal_fragment	FALSE	canonical	0	0	junction_13	1.60727512683216	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTAGTACTAAGAGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	90044226	90096946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_90044309_90051465_90051665_90058409_90058556_90061775_90061998_90067136_90067311_90075040_90075234_90076600_90076690_90077296_90077402_90077865_90077968_90079355_90079485_90081636_90081765_90083144_90083278_90087456_90087520_90088677_90088858_90089189_90089271_90089786_90089919_90092731_90092891_90093338_90093431_90096727
Isoform_120897_4	chr3	+	989	8	FSM	ENSMUSG00000027935.15	ENSMUST00000107373.8	1415	8	5	421	5	-5	multi-exon	FALSE	canonical	2	6	junction_1	8.56666534317997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAATGTCCCATTTGCA	NA	False	NA	1	True	ATTAAA	-13	NA	90121006	90133271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_90121130_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
Isoform_120898_9	chr3	+	1003	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	102	2	102	-2	multi-exon	FALSE	canonical	3	20	junction_1	3.88613443106727	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTCCCATTTGCATTA	NA	False	NA	4	True	ATTAAA	-16	NA	90128195	90133274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
Isoform_120902_288	chr3	+	1096	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	5	0	5	0	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138908	90143145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
Isoform_120904_28	chr3	+	1274	4	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	8	0	intron_retention	FALSE	canonical	3	314	junction_3	19.2527054375915	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138926	90143145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_90139348_90139501_90139819_90141229_90141310_90142689
Isoform_120907_10	chr3	+	1446	3	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	5	0	intron_retention	FALSE	canonical	3	314	junction_2	23	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138908	90143145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_90139819_90141229_90141310_90142689
Isoform_120909_8	chr3	+	2834	2	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	-9	0	intron_retention	FALSE	canonical	3	314	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138931	90143145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_90141310_90142689
Isoform_120910_554	chr3	+	2333	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	31	0	31	0	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGGTATCTGATTCT	NA	False	NA	-1	True	AATAAA	-16	NA	90155509	90160919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
Isoform_120916_7	chr3	+	3748	14	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-19	0	intron_retention	TRUE	canonical	3	17	junction_11	29.6114882551754	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGTGCTTGGCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	90161583	90171427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_90161866_90164423_90164526_90164601_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
Isoform_120919_29	chr3	+	5603	28	FSM	ENSMUSG00000042404.17	ENSMUST00000129564.8	5647	28	40	4	40	-4	multi-exon	FALSE	canonical	3	27	junction_1	11.4060845793856	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCTGTTCTCTG	NA	False	NA	28	True	AGTAAA	-22	NA	90172531	90187972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
Isoform_120921_10	chr3	+	5656	28	FSM	ENSMUSG00000042404.17	ENSMUST00000129564.8	5647	28	-21	12	-21	-12	multi-exon	TRUE	canonical	3	27	junction_1	11.4060845793856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTTCTGCCTCCT	NA	False	NA	20	True	AGTAAA	-14	NA	90172470	90187964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
Isoform_120924_10	chr3	+	5624	11	FSM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	21	1793	15	-1793	multi-exon	FALSE	canonical	3	14	junction_1	3.87814388593306	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTATGTCATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	90200505	90268921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_90200732_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
Isoform_120931_1111	chr3	+	2010	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	11	6	1	-6	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	1111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACCAGTACAAGCATT	NA	False	NA	12	True	AATAAA	-17	NA	90383464	90395680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
Isoform_120948_3	chr3	+	766	4	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-60	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	161.470327511486	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGATGCTTATTTATT	NA	False	NA	9	True	AATAAA	-14	NA	90421681	90431882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_90421773_90422067_90422327_90423156_90423350_90431659
Isoform_120949_96	chr3	+	443	3	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	558	6	558	-6	3prime_fragment	FALSE	canonical	3	229	junction_1	83.5	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGATGCTTATTTATT	NA	False	NA	9	True	AATAAA	-14	NA	90422299	90431882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_90422327_90423156_90423350_90431659
Isoform_120950_45	chr3	+	494	3	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	507	6	507	-6	3prime_fragment	FALSE	canonical	3	229	junction_1	83.5	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGATGCTTATTTATT	NA	False	NA	9	True	AATAAA	-14	NA	90422248	90431882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_90422327_90423156_90423350_90431659
Isoform_120954_9	chr3	+	462	3	FSM	ENSMUSG00000001025.9	ENSMUST00000001051.9	731	3	270	-1	-2	1	multi-exon	FALSE	canonical	3	31	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	5467	False	NA	23	True	AATAAA	-23	NA	90520458	90521722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_90520534_90521049_90521212_90521497
Isoform_120956_478	chr3	+	503	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	9	-1	9	1	multi-exon	FALSE	canonical	3	443	junction_1	9.5	478	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAGAGTCAGTAGATTT	NA	False	NA	8	True	AATAAA	-26	NA	93427803	93433595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_93427861_93431357_93431507_93433298
Isoform_120958_316	chr3	+	632	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	54	-1	-29	1	multi-exon	FALSE	canonical	3	427	junction_2	41.5	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACGTAGAGTGTTTCT	NA	False	NA	21	True	AATAAA	-25	NA	93462440	93471951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_93462519_93468250_93468403_93471549
Isoform_120959_13	chr3	+	690	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	-4	-1	-4	1	multi-exon	TRUE	canonical	3	427	junction_2	41.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACGTAGAGTGTTTCT	NA	False	NA	21	True	AATAAA	-25	NA	93462382	93471951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_93462519_93468250_93468403_93471549
Isoform_120961_11	chr3	+	1744	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	32	5	-9	-5	multi-exon	FALSE	canonical	3	18	junction_4	4.47213595499958	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATATTTGCTTCTTGTT	NA	False	NA	12	True	AATAAA	-22	NA	94217427	94239842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
Isoform_120966_22	chr3	+	1294	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	-61	-2	-17	2	multi-exon	FALSE	canonical	2	27	junction_5	8.74070935336486	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTATGTATGTGT	NA	False	NA	NA	False	ATTAAA	-28	NA	94320562	94333697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
Isoform_120967_5	chr3	+	2537	14	FSM	ENSMUSG00000041912.13	ENSMUST00000166032.8	5692	14	-5	3160	-5	-1	multi-exon	FALSE	canonical	1	1	junction_7	17.2732991609977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACTCAGTCACAACGTG	NA	False	NA	NA	False	AATAAA	-24	NA	94320574	94338815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097_94333420_94335161_94335323_94335452_94335626_94335966_94336032_94336346_94336499_94336663_94336766_94337357_94337455_94337866_94337959_94338124
Isoform_120968_501	chr3	+	1590	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	12	10	0	-10	multi-exon	FALSE	canonical	3	188	junction_4	26.1002341411379	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAAAGAA	8502	False	NA	NA	False	NA	NA	NA	94350643	94356005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
Isoform_120972_24	chr3	+	1505	6	NIC	ENSMUSG00000028140.14	novel	1612	7	NA	NA	1	-10	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	87.5337649138891	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAAAGAA	8503	False	NA	NA	False	NA	NA	NA	94350644	94356005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94355092
Isoform_120975_67	chr3	+	5115	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	-158	1442	-158	9	multi-exon	FALSE	canonical	3	43	junction_5	12.0021860148809	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTGAACTCTTTCCTT	NA	False	NA	77	True	TATAAA	-20	NA	94744719	94788195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
Isoform_120977_20	chr3	+	6538	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	-139	0	-139	0	multi-exon	FALSE	canonical	3	43	junction_5	12.0021860148809	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTTAAGTATATC	NA	False	NA	16	True	AATAAA	-18	NA	94744738	94789637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
Isoform_120978_5	chr3	+	5109	19	FSM	ENSMUSG00000038902.15	ENSMUST00000042402.12	4775	19	-325	-9	-179	9	multi-exon	FALSE	canonical	3	5	junction_6	17.676796536773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTGAACTCTTTCCTT	NA	False	NA	77	True	TATAAA	-20	NA	94744698	94788195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
Isoform_120979_5	chr3	+	4976	18	FSM	ENSMUSG00000038902.15	ENSMUST00000107266.8	4100	18	-345	-531	-199	-12	multi-exon	FALSE	canonical	3	9	junction_2	17.1879494279083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAAAATGAAAAATGA	NA	False	NA	56	True	NA	NA	NA	94744678	94788174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94745052_94761260_94761386_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
Isoform_120993_45	chr3	+	1701	12	FSM	ENSMUSG00000068874.14	ENSMUST00000090839.12	1712	12	11	0	1	0	multi-exon	FALSE	canonical	3	16	junction_2	7.58314791042644	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATCACTCTGTGACG	2665	False	NA	NA	False	AATAAA	-14	NA	94840377	94852069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94840474_94844007_94844065_94844205_94844319_94844518_94844705_94845265_94845387_94846956_94847140_94847358_94847538_94849774_94849854_94849935_94850058_94851149_94851243_94851385_94851505_94851716
Isoform_120994_6	chr3	+	4130	10	NIC	ENSMUSG00000005774.13	novel	4014	10	NA	NA	-46	0	intron_retention	FALSE	canonical	3	11	junction_1	9.15302014516399	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCTTATGTTTCTTT	NA	False	NA	4	True	NA	NA	NA	94861339	94868660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_94861493_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
Isoform_120995_13	chr3	+	4051	10	NIC	ENSMUSG00000005774.13	novel	4333	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_1	9.15302014516399	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCTTATGTTTCTTT	NA	False	NA	4	True	NA	NA	NA	94861418	94868660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_94861493_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
Isoform_120996_6	chr3	+	4110	10	NIC	ENSMUSG00000005774.13	novel	4333	10	NA	NA	0	-1	intron_retention	FALSE	canonical	2	5	junction_2	10.6666666666667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAGCCTTATGTTTCTT	NA	False	NA	3	True	NA	NA	NA	94861418	94868659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_94861563_94862325_94862448_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
Isoform_120997_38	chr3	+	4074	10	FSM	ENSMUSG00000005774.13	ENSMUST00000137088.8	4333	10	46	213	-6	-1	multi-exon	FALSE	canonical	3	32	junction_7	4.21637021355784	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAGCCTTATGTTTCTT	NA	False	NA	3	True	NA	NA	NA	94861464	94868659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
Isoform_120999_6	chr3	+	3308	12	FSM	ENSMUSG00000038861.15	ENSMUST00000107251.9	2895	12	62	-475	62	-160	multi-exon	FALSE	canonical	2	3	junction_2	12.4389417848655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTCTTGTTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	94882248	94913932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94882397_94891293_94892231_94896613_94896659_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
Isoform_121000_76	chr3	+	3282	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	190	220	45	-158	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTGTTGCTTCTGGG	NA	False	NA	NA	False	AATAAA	-16	NA	94882231	94913934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
Isoform_121001_29	chr3	+	3463	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	7	222	7	-160	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTCTTGTTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	94882048	94913932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
Isoform_121002_5	chr3	+	3573	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	210	-91	65	91	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCTCCTCTCCCTGGA	NA	False	NA	NA	False	AATAAA	-16	NA	94882251	94914245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
Isoform_121003_3	chr3	+	3698	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	6	-12	6	12	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTCTGGTTTTCTCCCT	NA	False	NA	NA	False	ATTAAA	-15	NA	94882047	94914166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
Isoform_121004_6	chr3	+	2335	10	FSM	ENSMUSG00000038861.15	ENSMUST00000167008.8	1962	10	98	-471	53	-160	multi-exon	FALSE	canonical	0	0	junction_1	11.4611528517579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTCTTGTTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	94882239	94913932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_94882397_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
Isoform_121007_17	chr3	+	2282	5	ISM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	29	117	9	-117	intron_retention	FALSE	canonical	0	0	junction_1	386.814797416024	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGATGTGTAAGGT	2589	False	NA	46	True	AATAAA	-14	NA	95018361	95030245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572
Isoform_121008_747	chr3	+	1310	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	29	117	9	-117	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGATGTGTAAGGT	2589	False	NA	46	True	AATAAA	-14	NA	95018361	95030245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
Isoform_121010_36	chr3	+	1427	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	29	0	9	0	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAATAA	2589	False	NA	NA	False	NA	NA	NA	95018361	95030362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
Isoform_121014_56	chr3	+	2421	3	FSM	ENSMUSG00000053769.6	ENSMUST00000066386.6	2394	3	-25	-2	-25	2	multi-exon	FALSE	canonical	1	7	junction_2	5.5	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTAGTGGTTTTATT	8586	False	NA	19	True	ATTAAA	-15	NA	95041373	95046831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95042308_95044935_95045298_95045706
Isoform_121017_4	chr3	+	3544	19	NIC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.003967972811	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTGCCTGACTTTCCT	NA	False	NA	10	True	AATACA	-13	NA	95067777	95080965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
Isoform_121018_5	chr3	+	3883	19	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.003967972811	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCAGCAAGTCTTGTC	NA	False	NA	17	True	AATAAA	-26	NA	95067806	95081333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
Isoform_121019_9	chr3	+	3418	18	NIC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.8459637241572	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCGCTGCCTGACTTTC	NA	False	NA	8	True	AATACA	-11	NA	95067805	95080963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121020_6	chr3	+	3822	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.8459637241572	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCACATCAGCAAGTCTT	NA	False	NA	14	True	AATAAA	-23	NA	95067768	95081330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121021_3	chr3	+	3875	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	27.5562835925329	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCAGCAAGTCTTGTC	NA	False	NA	17	True	AATAAA	-26	NA	95067771	95081333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068014_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121022_5	chr3	+	3943	19	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	25.7440512126492	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCAAGTCTTGTCCTA	NA	False	NA	20	True	AATAAA	-29	NA	95067753	95081336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068014_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
Isoform_121023_7	chr3	+	3784	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	23.0883664290019	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAATTTCACATCAGCAA	NA	False	NA	9	True	AATAAA	-18	NA	95067805	95081325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068014_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121024_3	chr3	+	3461	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	23.0883664290019	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTGCCTGACTTTCCT	NA	False	NA	10	True	AATACA	-13	NA	95067768	95080965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068014_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121025_3	chr3	+	4156	21	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-37	-13	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	29.5425117415564	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGAATTTCACATCAG	NA	False	NA	6	True	AATAAA	-15	NA	95067730	95081322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
Isoform_121027_3	chr3	+	4065	20	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-31	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	28.2846629936582	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCAGCAAGTCTTGTC	NA	False	NA	17	True	AATAAA	-26	NA	95067736	95081333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121028_3	chr3	+	3994	20	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	28.2846629936582	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCACATCAGCAAGTCTT	NA	False	NA	14	True	AATAAA	-23	NA	95067804	95081330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121029_6	chr3	+	3950	20	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	26.8983929948681	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCAAGTCTTGTCCTA	NA	False	NA	20	True	AATAAA	-29	NA	95067805	95081336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
Isoform_121031_15	chr3	+	3854	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	24.8891989067994	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCAAGTCTTGTCCTA	NA	False	NA	20	True	AATAAA	-29	NA	95067805	95081336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121032_4	chr3	+	3554	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-34	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_2	24.8891989067994	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95067733	95080964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121033_6	chr3	+	3884	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	24.8891989067994	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCACATCAGCAAGTC	NA	False	NA	12	True	AATAAA	-21	NA	95067767	95081328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121035_7	chr3	+	3956	19	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-25	-7	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	25.1555653710228	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCACATCAGCAAGTC	NA	False	NA	12	True	AATAAA	-21	NA	95067742	95081328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
Isoform_121037_17	chr3	+	3848	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-13	-7	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	22.3489160462629	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCACATCAGCAAGTC	NA	False	NA	12	True	AATAAA	-21	NA	95067754	95081328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_121040_771	chr3	+	2746	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	60	-1	-18	1	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGTTTCAGAGTAATCA	1934	False	NA	22	True	AATAAA	-12	NA	95136102	95143721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
Isoform_121042_28	chr3	+	3183	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	-378	0	-378	0	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTTTCAGAGTAATC	1496	False	NA	21	True	AATAAA	-11	NA	95135664	95143720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
Isoform_121058_24	chr3	+	2874	12	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_2	65.9633005905055	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	False	NA	15	True	AATAAA	-16	NA	95188650	95203477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95188923_95189993_95190056_95190541_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
Isoform_121062_99	chr3	+	2846	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	-21	2	-21	1	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190233	95203475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
Isoform_121066_153	chr3	+	2737	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	88	2	88	1	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190342	95203475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
Isoform_121070_15	chr3	+	2736	10	FSM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	62	2	62	1	multi-exon	FALSE	canonical	3	18	junction_8	52.7870167352017	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190316	95203475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
Isoform_121073_9	chr3	+	2820	10	FSM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	-24	4	-24	1	multi-exon	FALSE	canonical	3	18	junction_8	52.7870167352017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTGCGTTCCTACCTT	NA	False	NA	11	True	AATAAA	-12	NA	95190230	95203473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
Isoform_121075_61	chr3	+	2298	10	NIC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	519	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57.7119282875444	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95194028	95203475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95194184_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
Isoform_121077_17	chr3	+	2267	10	NIC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	522	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	70.8557916466716	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	False	NA	12	True	AATAAA	-13	NA	95194031	95203474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95194184_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
Isoform_121083_191	chr3	+	2074	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	142	0	-21	0	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	4460	False	NA	45	True	AATAAA	-31	NA	95222536	95230910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_121088_18	chr3	+	2330	9	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	406	junction_8	25.2929708614864	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAAAGGGTTAGTTTTT	4476	False	NA	41	True	AATAAA	-27	NA	95222552	95230906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_121097_8	chr3	+	938	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-84	4	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	55.6437078403499	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTCTTCCTCTATTA	NA	False	NA	12	True	AGTAAA	-26	NA	95334897	95338402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_95335007_95335864_95336134_95337597_95337750_95337994
Isoform_121098_5	chr3	+	1091	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-240	1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	55.6437078403499	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCAGTGTCTTCCTCTA	NA	False	NA	9	True	AGTAAA	-23	NA	95334741	95338399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_95335007_95335864_95336134_95337597_95337750_95337994
Isoform_121099_298	chr3	+	4348	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	22	-1671	6	1	multi-exon	FALSE	canonical	0	0	junction_11	68.4937059524599	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTTGTGTTGTGTGA	NA	False	NA	NA	False	TTTAAA	-23	NA	95341720	95404549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
Isoform_121106_54	chr3	+	4347	22	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	83.8073051654387	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341720	95404551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
Isoform_121108_35	chr3	+	4302	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	21	2	7	1	multi-exon	FALSE	canonical	0	0	junction_10	84.9941174435031	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTTGTGTTGTGTGA	NA	False	NA	NA	False	TTTAAA	-23	NA	95341721	95404549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
Isoform_121121_22	chr3	+	1645	15	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	190	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	83.0812240877466	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGTGTTATTAACAAC	NA	False	NA	9	True	ATTAAA	-20	NA	95466988	95495172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95467035_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
Isoform_121124_8	chr3	+	1502	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	105.267194425529	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTGTTTACCTGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	95466989	95494905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
Isoform_121125_6	chr3	+	1785	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-12	192	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_2	105.267194425529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGTTATTAACAACTT	NA	False	NA	11	True	ATTAAA	-22	NA	95466975	95495174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
Isoform_121127_7	chr3	+	1442	16	FSM	ENSMUSG00000028109.15	ENSMUST00000107154.4	1444	16	1	1	1	-1	multi-exon	FALSE	canonical	3	12	junction_15	107.711260114974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTACCTGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	95466989	95494906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95492845_95492901_95494691
Isoform_121128_85	chr3	+	1652	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	1	-268	1	189	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGTGTGTTATTAACAA	NA	False	NA	8	True	ATTAAA	-19	NA	95466989	95495171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
Isoform_121129_119	chr3	+	1388	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	1	-4	1	0	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466989	95494907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
Isoform_121133_64	chr3	+	2829	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	7	0	7	0	multi-exon	FALSE	canonical	3	50	junction_3	6.87386354243376	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTCTCTCTGTACAT	NA	False	NA	4	True	AATAAA	-15	NA	95496251	95526553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
Isoform_121140_344	chr3	+	2259	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-18	1604	-9	-1604	multi-exon	FALSE	canonical	3	422	junction_2	58	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCGATCTTCTCGAATTC	391	False	NA	27	True	NA	NA	NA	95532312	95537809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95532488_95534059_95534186_95535851
Isoform_121141_28	chr3	+	3883	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-37	-1	-10	1	multi-exon	FALSE	canonical	3	422	junction_2	58	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAAAACTAGACCTG	372	False	NA	11	True	AATAAA	-22	NA	95532293	95539414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95532488_95534059_95534186_95535851
Isoform_121144_65	chr3	+	1140	4	FSM	ENSMUSG00000038619.13	ENSMUST00000058230.13	1130	4	2	-12	2	12	multi-exon	FALSE	canonical	3	58	junction_3	204.491781959298	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACCTGTTGTGAAGCAG	402	False	NA	22	True	AATAAA	-33	NA	95532323	95539425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95532488_95534059_95534186_95535851_95536019_95538742
Isoform_121154_195	chr3	+	2251	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-69	1236	-69	1117	multi-exon	FALSE	canonical	3	754	junction_2	15.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGCCAAGCTTTGTTT	6348	False	NA	35	True	AATAAA	-26	NA	95566029	95569251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95566799_95567071_95567320_95568017
Isoform_121155_972	chr3	+	3425	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-8	1	-8	-1	multi-exon	FALSE	canonical	3	754	junction_2	15.5	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTAAGGTGTGGTATGG	6409	False	NA	13	True	AATAAA	-13	NA	95566090	95570486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95566799_95567071_95567320_95568017
Isoform_121156_1287	chr3	+	2189	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-8	1237	-8	1116	multi-exon	FALSE	canonical	3	754	junction_2	15.5	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGCCAAGCTTTGTT	6409	False	NA	34	True	AATAAA	-25	NA	95566090	95569250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95566799_95567071_95567320_95568017
Isoform_121164_142	chr3	+	3488	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-69	-1	-69	1	multi-exon	FALSE	canonical	3	754	junction_2	15.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGGTGTGGTATGGGT	6348	False	NA	15	True	AATAAA	-15	NA	95566029	95570488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95566799_95567071_95567320_95568017
Isoform_121199_235	chr3	+	2040	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-2	825	-2	18	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGGGGGACTTGGCTT	NA	False	NA	-2	True	AATAAA	-13	NA	95801278	95804775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
Isoform_1212_1402	SIRV7	-	2497	5	FSM	SIRV7A	SIRV703	2498	5	1	0	1	0	multi-exon	FALSE	canonical	3	1087	junction_2	1651.92015167199	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147917	1000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
Isoform_121200_83	chr3	+	2083	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-41	821	-41	22	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGGACTTGGCTTTAAG	NA	False	NA	2	True	AATAAA	-17	NA	95801239	95804779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
Isoform_121203_5	chr3	+	3343	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	18	-498	18	498	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGGATCTCACCTAATT	NA	False	NA	NA	False	AATAAA	-16	NA	95801298	95806098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
Isoform_121205_16	chr3	+	3140	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	24	-301	24	301	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGGCTGAGAATGCTT	NA	False	NA	NA	False	NA	NA	NA	95801304	95805901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
Isoform_121207_45	chr3	+	1695	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	-71	-23	15	23	multi-exon	FALSE	canonical	3	108	junction_6	85.2670641116617	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGACTTGGCTTTAAGA	NA	False	NA	3	True	AATAAA	-18	NA	95801295	95804780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
Isoform_121211_6	chr3	+	2621	5	NIC	ENSMUSG00000015750.16	novel	2863	6	NA	NA	-41	23	intron_retention	FALSE	canonical	3	313	junction_3	16.8374582404827	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGACTTGGCTTTAAGA	NA	False	NA	3	True	AATAAA	-18	NA	95801239	95804780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
Isoform_121218_117	chr3	+	3186	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	15	-1820	10	-5	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTAGCTTCAGTGTGT	NA	False	NA	100	True	AATAAA	-17	NA	95836604	95854697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
Isoform_121224_1886	chr3	+	3223	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	47	4	10	-4	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	1886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTAGCTTCAGTGTGTG	NA	False	NA	101	True	AATAAA	-18	NA	95836604	95854698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
Isoform_121243_8	chr3	+	5822	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	17	-2296	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.7976808144557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATGTTGTTTTTATTT	NA	False	NA	12	True	TATAAA	-32	NA	96011876	96066150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
Isoform_121244_16	chr3	+	4202	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-16	-3970	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.7976808144557	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTTGATATTAG	NA	False	NA	NA	False	AATAAA	-16	NA	96011822	96064476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
Isoform_121245_5	chr3	+	4069	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-13	-3966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.28626204439	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011825	96064480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
Isoform_121247_5	chr3	+	5760	12	FSM	ENSMUSG00000038495.15	ENSMUST00000035519.12	8043	12	-12	2295	-12	-2295	multi-exon	FALSE	canonical	3	30	junction_1	14.2242953608394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTTGTTTTTATTTA	NA	False	NA	13	True	TATAAA	-33	NA	96011826	96066151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96012132_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
Isoform_121248_13	chr3	+	3933	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	6	-3970	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	17.0565418486489	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTTGATATTAG	NA	False	NA	NA	False	AATAAA	-16	NA	96011844	96064476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_96012132_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
Isoform_121250_7	chr3	+	2775	17	FSM	ENSMUSG00000045934.16	ENSMUST00000054356.16	2778	17	1	2	1	-1	multi-exon	FALSE	canonical	2	2	junction_4	1.93245310421754	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGGTATTTTCTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	96069321	96079032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96069576_96069945_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078401
Isoform_121253_1336	chr3	+	1523	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	218	174	3	-174	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCTGGTGAAGTAACTT	NA	False	NA	21	True	AATAAA	-17	NA	96079865	96084706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
Isoform_121254_921	chr3	+	1547	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	193	175	-22	-175	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTCTGGTGAAGTAACT	NA	False	NA	20	True	AATAAA	-16	NA	96079840	96084705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
Isoform_121267_6	chr3	+	4324	13	FSM	ENSMUSG00000038486.10	ENSMUST00000035371.9	4334	13	8	2	8	1	multi-exon	FALSE	canonical	0	0	junction_2	2.01900690659762	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTGTGTCTGCTCCT	1762	False	NA	2	True	AATAAA	-23	NA	96088474	96102835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96088620_96091954_96092924_96094288_96094470_96095411_96095564_96095640_96095775_96096377_96096468_96096682_96096794_96096966_96097056_96097598_96097764_96097942_96098077_96099729_96099937_96100504_96100665_96101048
Isoform_121268_4	chr3	+	1381	2	ISM	ENSMUSG00000038403.11	ENSMUST00000049208.11	2028	4	2178	-1	2178	1	3prime_fragment	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTCTGTTGCCTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	96434665	96436527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_96434899_96435379
Isoform_121270_1025	chr3	+	2799	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	3	25	0	0	multi-exon	FALSE	canonical	3	279	junction_1	78.2390371795021	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTCTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	96465275	96469174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
Isoform_121280_739	chr3	+	2796	8	FSM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	0	-1	0	0	multi-exon	FALSE	canonical	3	228	junction_1	94.3746333956929	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTCTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	96465275	96469174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
Isoform_121300_84	chr3	+	1714	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	10	880	10	-880	multi-exon	FALSE	canonical	3	2213	junction_2	872.428931202995	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCCCTTCTCTTCCTTT	8652	False	NA	10	True	ATTAAA	-22	NA	96537265	96540227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
Isoform_121301_1254	chr3	+	713	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	0	1891	0	0	multi-exon	FALSE	canonical	3	2213	junction_2	872.428931202995	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
Isoform_121304_1019	chr3	+	710	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	7	1891	0	0	multi-exon	FALSE	canonical	3	2531	junction_2	745.762804114016	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
Isoform_121305_73	chr3	+	1720	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	9	879	2	-879	multi-exon	FALSE	canonical	3	2531	junction_2	745.762804114016	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCCTTCTCTTCCTTTT	8644	False	NA	11	True	ATTAAA	-23	NA	96537257	96540228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
Isoform_121317_4	chr3	+	1502	4	FSM	ENSMUSG00000028102.16	ENSMUST00000144962.8	2235	4	93	640	-31	0	multi-exon	FALSE	canonical	3	9	junction_1	127.753234357839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542784	96552042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96542817_96543989_96544106_96544446_96544649_96550890
Isoform_121318_4	chr3	+	2213	4	FSM	ENSMUSG00000028102.16	ENSMUST00000156015.2	1017	4	132	-1328	-21	-5	multi-exon	FALSE	canonical	3	31	junction_1	117.382565428886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGCCTCAGAAAGGGT	NA	False	NA	-2	True	AATAAA	-14	NA	96542947	96552677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96543056_96543989_96544106_96544446_96544649_96550890
Isoform_121319_28	chr3	+	1559	4	FSM	ENSMUSG00000028102.16	ENSMUST00000156015.2	1017	4	154	-696	1	3	multi-exon	FALSE	canonical	3	31	junction_1	117.382565428886	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTATTCAATTCAAGA	NA	False	NA	12	True	ATTAAA	-19	NA	96542969	96552045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96543056_96543989_96544106_96544446_96544649_96550890
Isoform_121320_6	chr3	+	1740	4	FSM	ENSMUSG00000028102.16	ENSMUST00000156015.2	1017	4	-29	-694	-29	1	multi-exon	FALSE	canonical	3	31	junction_1	117.382565428886	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTATTCAATTCAA	NA	False	NA	10	True	ATTAAA	-17	NA	96542786	96552043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96543056_96543989_96544106_96544446_96544649_96550890
Isoform_121321_7	chr3	+	2392	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	38	-6	-32	6	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGGTCAAAATTTGTG	NA	False	NA	9	True	AATAAA	-25	NA	96542783	96552688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
Isoform_121322_27	chr3	+	2194	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	236	-6	-6	6	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGGTCAAAATTTGTG	NA	False	NA	9	True	AATAAA	-25	NA	96542981	96552688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
Isoform_121323_230	chr3	+	1550	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	236	638	-6	2	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTATTCAATTCAAG	NA	False	NA	11	True	ATTAAA	-18	NA	96542981	96552044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
Isoform_121324_50	chr3	+	1747	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	39	638	-31	2	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTATTCAATTCAAG	NA	False	NA	11	True	ATTAAA	-18	NA	96542784	96552044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
Isoform_121326_20	chr3	+	1915	3	NIC	ENSMUSG00000028102.16	novel	1122	5	NA	NA	-13	0	intron_retention	FALSE	canonical	3	279	junction_2	10.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542955	96552042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96543060_96543989_96544649_96550890
Isoform_121327_17	chr3	+	3857	13	FSM	ENSMUSG00000038354.14	ENSMUST00000048427.9	4052	13	197	-2	1	2	multi-exon	FALSE	canonical	3	6	junction_1	35.4200978730061	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	468	False	NA	18	True	AATAAA	-18	NA	96577643	96598350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
Isoform_121328_14	chr3	+	3306	14	NIC	ENSMUSG00000038354.14	novel	3295	14	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	34.4249462320121	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	477	False	NA	18	True	AATAAA	-18	NA	96577652	96598350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598154
Isoform_121329_3	chr3	+	3849	13	ISM	ENSMUSG00000038354.14	ENSMUST00000122960.6	3295	14	11	-23	11	0	intron_retention	FALSE	canonical	1	2	junction_2	36.3600818969864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTATTGTTGTGGTTTTTG	478	False	NA	16	True	AATAAA	-16	NA	96577653	96598348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_96577766_96585448_96585584_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
Isoform_121342_10	chr3	+	2719	15	NIC	ENSMUSG00000028101.19	novel	2858	14	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	47.4118408529053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2622	False	NA	5	True	AATAAA	-15	NA	96603733	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96603848_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_121343_8	chr3	+	3259	13	ISM	ENSMUSG00000028101.19	ENSMUST00000162934.8	2281	14	-28	-488	-28	0	intron_retention	FALSE	canonical	3	24	junction_10	49.2191104484156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2618	False	NA	5	True	AATAAA	-15	NA	96603729	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664
Isoform_121344_29	chr3	+	3290	13	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	30	0	-28	0	intron_retention	FALSE	canonical	3	88	junction_1	28.0132657067247	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2618	False	NA	5	True	AATAAA	-15	NA	96603729	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
Isoform_121345_14	chr3	+	3327	13	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	-7	0	-7	0	intron_retention	FALSE	canonical	3	88	junction_1	28.0132657067247	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2581	False	NA	5	True	AATAAA	-15	NA	96603692	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
Isoform_121346_78	chr3	+	2819	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	39	0	-19	0	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2627	False	NA	5	True	AATAAA	-15	NA	96603738	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_121347_36	chr3	+	2878	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	-20	0	-20	0	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2568	False	NA	5	True	AATAAA	-15	NA	96603679	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_121348_5	chr3	+	2938	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	11	-91	11	-17	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACATT	2599	False	NA	96	True	NA	NA	NA	96603710	96613369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_121352_21	chr3	+	2686	15	FSM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	-2	11	-2	0	multi-exon	FALSE	canonical	3	19	junction_2	45.7727304969111	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3319	False	NA	5	True	AATAAA	-15	NA	96604430	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96604512_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_121354_7	chr3	+	2791	14	NIC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	24	junction_10	45.862026163123	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3288	False	NA	5	True	AATAAA	-15	NA	96604399	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_121355_51	chr3	+	3250	13	ISM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	35	108	1	0	intron_retention	FALSE	canonical	3	105	junction_1	23.8449854966056	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3322	False	NA	5	True	AATAAA	-15	NA	96604433	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
Isoform_121356_7	chr3	+	3367	13	ISM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	21	5	-13	-5	intron_retention	FALSE	canonical	3	105	junction_1	23.8449854966056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATTTAAAGTGTTTAT	3308	False	NA	108	True	NA	NA	NA	96604419	96613381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
Isoform_121357_202	chr3	+	2788	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	35	108	1	0	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3322	False	NA	5	True	AATAAA	-15	NA	96604433	96613278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_121361_360	chr3	+	2163	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	47	-1	39	1	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4842	False	NA	15	True	AATAAA	-22	NA	96635026	96698469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
Isoform_121363_86	chr3	+	2084	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-77	202	-77	-202	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAAGCTCATTTTT	4718	False	NA	20	True	ATTAAA	-20	NA	96634902	96698266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
Isoform_121365_67	chr3	+	2275	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-65	-1	-65	1	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4730	False	NA	15	True	AATAAA	-22	NA	96634914	96698469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
Isoform_121381_16	chr3	+	2090	7	NIC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	119	junction_1	220.417028985209	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4798	False	NA	15	True	AATAAA	-22	NA	96634982	96698469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96635227_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
Isoform_121384_4	chr3	+	2476	10	NIC	ENSMUSG00000038298.15	novel	2406	9	NA	NA	4	-5	intron_retention	FALSE	canonical	1	2	junction_1	8.45175122477183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTTGGTAAAATCTAT	7110	False	NA	NA	False	AATAAA	-17	NA	96736782	96778237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96736866_96737399_96737473_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
Isoform_121385_6	chr3	+	2029	10	NIC	ENSMUSG00000038298.15	novel	2406	9	NA	NA	4	2	intron_retention	FALSE	canonical	1	2	junction_1	8.45175122477183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTTATAGAAGTGTG	7110	False	NA	NA	False	ATTAAA	-12	NA	96736782	96777790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96736866_96737399_96737473_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
Isoform_121386_3	chr3	+	2069	9	FSM	ENSMUSG00000038298.15	ENSMUST00000058865.14	2406	9	-115	452	-115	2	multi-exon	FALSE	canonical	3	10	junction_1	6.6226410894748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTTATAGAAGTGTG	7604	False	NA	NA	False	ATTAAA	-12	NA	96737276	96777790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96737473_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
Isoform_121388_10	chr3	+	2238	9	NIC	ENSMUSG00000038298.15	novel	531	2	NA	NA	15	3	intron_retention	FALSE	canonical	2	4	junction_1	7.93626958967499	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTTATAGAAGTGTGC	NA	False	NA	NA	False	ATTAAA	-13	NA	96740556	96777791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_96740921_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
Isoform_121389_1016	chr3	+	1609	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	86	59	86	-3	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCATCATGTTGAGAT	NA	False	NA	14	True	AATAAA	-14	NA	97066178	97083831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
Isoform_121390_187	chr3	+	1726	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	31	-3	31	3	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGCCTGTGTGTAAA	NA	False	NA	14	True	NA	NA	NA	97066123	97083893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
Isoform_121392_965	chr3	+	1662	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	33	59	33	-3	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCATCATGTTGAGAT	NA	False	NA	14	True	AATAAA	-14	NA	97066125	97083831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
Isoform_121424_82	chr3	+	4899	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	102	5	100	-5	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTTGAGTTACTTA	NA	False	NA	NA	False	AATAAA	-15	NA	97565629	97581123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
Isoform_121425_10	chr3	+	4993	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	13	0	11	0	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTTACTTACTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	97565540	97581128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
Isoform_121426_20	chr3	+	4888	7	ISM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	336	1	334	-1	3prime_fragment	FALSE	canonical	3	65	junction_1	8.35995746932297	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGAGTTACTTACTGA	NA	False	NA	NA	False	AATAAA	-19	NA	97565863	97581127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
Isoform_121427_7	chr3	+	5073	7	NIC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	145	-5	intron_retention	FALSE	canonical	3	65	junction_1	8.35995746932297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTTGAGTTACTTA	NA	False	NA	NA	False	AATAAA	-15	NA	97565674	97581123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
Isoform_121429_218	chr3	+	2781	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	29	0	3	0	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTGTGAAGTTCTGT	NA	False	NA	18	True	AATAAA	-17	NA	97808534	97830592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
Isoform_121431_282	chr3	+	1369	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	28	1413	2	12	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATATAGTATTGCTTGA	NA	False	NA	-13	True	ATTAAA	-23	NA	97808533	97829179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
Isoform_121436_3	chr3	+	4357	23	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	-11	18634	0	-18634	5prime_fragment	FALSE	canonical	2	4	junction_15	4.73600591913858	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAACAAGACATAAAAT	NA	False	NA	NA	False	NA	NA	NA	97920842	98039043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_97989232_97989356_98005411_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513
Isoform_121437_11	chr3	+	2662	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	22	1726	-3	-726	multi-exon	FALSE	canonical	3	38	junction_2	3.66606055596467	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGAGTTCACCTCGATT	NA	False	NA	8	True	AATAAA	-23	NA	99048405	99125793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
Isoform_121438_58	chr3	+	2541	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	22	1847	-3	-847	multi-exon	FALSE	canonical	3	38	junction_2	3.66606055596467	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTTGTACTGTGACT	NA	False	NA	7	True	NA	NA	NA	99048405	99125672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
Isoform_121440_6	chr3	+	2281	5	NIC	ENSMUSG00000004233.15	novel	4410	6	NA	NA	-3	-849	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.1383571472171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAACGTTGTACTGTGA	NA	False	NA	5	True	NA	NA	NA	99048405	99125670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_99048505_99111851_99111933_99112540_99112627_99121971_99122091_99123774
Isoform_121442_25	chr3	+	3535	8	FSM	ENSMUSG00000027868.12	ENSMUST00000029462.10	3566	8	31	0	31	0	multi-exon	FALSE	canonical	1	3	junction_1	3.73073281634303	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTGTTTGTTCATA	NA	False	NA	NA	False	AATAAA	-15	NA	99161106	99261575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_99161402_99216145_99216360_99220328_99220431_99222059_99222232_99223506_99223675_99233699_99233765_99247865_99247964_99259154
Isoform_121443_4	chr3	+	2067	13	FSM	ENSMUSG00000027865.11	ENSMUST00000106997.2	2014	13	-53	0	-53	0	multi-exon	FALSE	canonical	3	84	junction_11	11.971029845237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100069780	100109786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289
Isoform_121444_164	chr3	+	2579	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	103	326	-34	0	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTCTTCTCAGAGTCA	NA	False	NA	22	True	AGTAAA	-33	NA	100069799	100113971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
Isoform_121449_29	chr3	+	2919	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	85	4	-52	-4	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTCTATAAGGTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	100069781	100114293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
Isoform_121450_5	chr3	+	3883	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	103	-978	-34	978	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGCAAGTTGCAATTTA	NA	False	NA	NA	False	NA	NA	NA	100069799	100115275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
Isoform_121451_5	chr3	+	2528	14	NIC	ENSMUSG00000027865.11	novel	3008	14	NA	NA	-21	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_12	27.3565110755164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGTCTTCTCAGAGTC	NA	False	NA	21	True	AGTAAA	-32	NA	100069812	100113970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109326_100109434_100113087
Isoform_121452_33	chr3	+	2331	6	FSM	ENSMUSG00000033233.18	ENSMUST00000037409.13	4612	6	-27	2308	-27	1	multi-exon	FALSE	canonical	2	8	junction_3	2.33238075793812	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAGACTTCAAGTGCTT	4304	False	NA	8	True	ATTAAA	-19	NA	100829763	100839019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_100830716_100832256_100832991_100834540_100834671_100835370_100835486_100837132_100837260_100838746
Isoform_121453_5	chr3	+	1887	2	FSM	ENSMUSG00000042035.12	ENSMUST00000198995.5	1855	2	-5	-27	-5	27	multi-exon	FALSE	canonical	3	79	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTGCTTCGCAACAT	247	False	NA	NA	False	NA	NA	NA	101284393	101286883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_101284519_101285121
Isoform_121456_5	chr3	+	7231	12	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	-20	-220	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	19.1665169475527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGCTGTTTACATTTTC	232	False	NA	3	True	AGTAAA	-11	NA	101284378	101370155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
Isoform_121457_12	chr3	+	7416	12	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	19.1665169475527	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTGCCACATGCTGAAA	268	False	NA	15	True	NA	NA	NA	101284414	101370376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
Isoform_121460_3	chr3	+	7369	11	FSM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	1	1	1	-1	multi-exon	FALSE	canonical	2	14	junction_5	19.1627242322171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTTGCCACATGCTGA	253	False	NA	13	True	NA	NA	NA	101284399	101370374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
Isoform_121463_47	chr3	+	3997	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	418	69	-10	-69	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGTTAAAGAAATTTAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	102642262	102679539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
Isoform_121465_18	chr3	+	519	3	ISM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	27	11037	5	71	5prime_fragment	FALSE	canonical	3	384	junction_2	20	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAAATCGTGGGGTCGTT	NA	False	NA	NA	False	AATAAA	-16	NA	102903050	102904738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_102903284_102903471_102903578_102904558
Isoform_121466_522	chr3	+	2368	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	28	4979	6	1286	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGCTCATTTTACTGA	NA	False	NA	17	True	AATAAA	-14	NA	102903051	102910796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
Isoform_121481_557	chr3	+	4132	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	185	1	-1	-1	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	NA	False	NA	21	True	AATAAA	-24	NA	102927926	102965501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
Isoform_121488_710	chr3	+	4039	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	4	-194	-1	-1	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	NA	False	NA	21	True	AATAAA	-24	NA	102927926	102965501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
Isoform_12153_292	chr11	-	8565	35	NIC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	341	junction_32	94.310427564532	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGACTAGCCGGTGT	1833	False	NA	-8	True	ATTAAA	-14	NA	30148244	30049395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
Isoform_121576_416	chr3	+	4409	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	55	6	-8	2	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTATTTTCCCTACTGCC	NA	False	NA	20	True	AATAAA	-22	NA	102965655	102975224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
Isoform_12159_33	chr11	-	8443	36	FSM	ENSMUSG00000020315.19	ENSMUST00000006629.14	8461	36	17	1	17	0	multi-exon	FALSE	canonical	3	15	junction_35	139.777607619521	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGACTAGCCGGTGT	1536	False	NA	-8	True	ATTAAA	-14	NA	30218152	30049395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30169578_30169773_30217947
Isoform_121593_24	chr3	+	4367	6	FSM	ENSMUSG00000027852.15	ENSMUST00000200069.5	831	6	-27	-3509	-8	2	multi-exon	FALSE	canonical	3	47	junction_5	301.169453962383	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTATTTTCCCTACTGCC	NA	False	NA	20	True	AATAAA	-22	NA	102965655	102975224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971549
Isoform_121606_4	chr3	+	436	2	ISM	ENSMUSG00000070385.13	ENSMUST00000177250.2	751	6	4427	-9	4427	1	3prime_fragment	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACACCGCGAGTGGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	103006192	103007031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_103006453_103006855
Isoform_121608_467	chr3	+	4963	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009975	103077054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
Isoform_121614_7	chr3	+	5613	18	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	43	0	intron_retention	FALSE	canonical	3	218	junction_1	24.0141250244943	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103010018	103077054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
Isoform_121616_11	chr3	+	4750	18	FSM	ENSMUSG00000007379.16	ENSMUST00000173206.8	4879	18	91	38	35	0	multi-exon	FALSE	canonical	2	18	junction_4	64.3554145131754	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103010010	103077047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
Isoform_121617_10	chr3	+	5135	19	FSM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	-163	7	-163	0	multi-exon	FALSE	canonical	2	20	junction_1	61.6686686361723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	4554	False	NA	NA	False	GATAAA	-9	NA	103034708	103077047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103034967_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
Isoform_121618_21	chr3	+	4994	19	FSM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	-22	7	-22	0	multi-exon	FALSE	canonical	2	20	junction_1	61.6686686361723	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	4695	False	NA	NA	False	GATAAA	-9	NA	103034849	103077047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103034967_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
Isoform_121630_78	chr3	+	1089	7	FSM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	-22	338	1	1	multi-exon	FALSE	canonical	3	101	junction_2	1366.36225268249	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	5024	False	NA	49	True	AATAAA	-17	NA	103079065	103086144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_121634_3959	chr3	+	1050	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	94	323	0	2	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	3959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGGCTATAGTG	5023	False	NA	50	True	AATAAA	-18	NA	103079064	103086145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_121635_75	chr3	+	1104	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	39	324	-9	1	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	4968	False	NA	49	True	AATAAA	-17	NA	103079009	103086144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_121636_285	chr3	+	1373	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	95	-1	1	1	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATATGTTT	5024	False	NA	NA	False	NA	NA	NA	103079065	103086469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_121648_84	chr3	+	1129	6	FSM	ENSMUSG00000005687.15	ENSMUST00000155520.8	737	6	-12	-380	1	0	multi-exon	FALSE	canonical	3	3472	junction_3	182.474107752306	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5024	False	NA	48	True	AATAAA	-16	NA	103079065	103086143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_121662_149	chr3	+	5177	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	480	3218	-106	-5	multi-exon	TRUE	canonical	3	95	junction_7	11.658340255239	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATTCCTTTGGGTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	103187088	103262873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
Isoform_121663_22	chr3	+	8379	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	480	16	-106	-16	multi-exon	FALSE	canonical	3	95	junction_7	11.658340255239	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTCAAATGAATTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	103187088	103266075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
Isoform_121668_14	chr3	+	5171	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-148	2	-148	-2	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCCTTTGGGTTGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	103187046	103262876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
Isoform_121672_3	chr3	+	2694	11	FSM	ENSMUSG00000032952.12	ENSMUST00000076599.8	2692	11	-1	-1	-1	1	multi-exon	FALSE	canonical	2	2	junction_1	21.5548138474912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGCCTGTCGTCACT	NA	False	NA	16	True	ATTAAA	-20	NA	103716834	103729340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103716971_103717183_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
Isoform_121673_82	chr3	+	2825	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	-27	1	1	1	multi-exon	FALSE	canonical	3	54	junction_7	8.73053390247253	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGCCTGTCGTCACT	NA	False	NA	16	True	ATTAAA	-20	NA	103716916	103729340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
Isoform_121674_12	chr3	+	2900	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	-104	3	4	-1	multi-exon	FALSE	canonical	3	54	junction_7	8.73053390247253	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGGTGCCTGTCGTCA	NA	False	NA	14	True	ATTAAA	-18	NA	103716839	103729338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
Isoform_121678_60	chr3	+	6268	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	427	17	11	6	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGTTTCAAAATGAAT	NA	False	NA	24	True	AATAAA	-21	NA	103821893	103873935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
Isoform_121679_7	chr3	+	5570	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	389	753	-27	-730	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTGTGTTTTTCTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	103821855	103873199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
Isoform_121681_35	chr3	+	4310	8	FSM	ENSMUSG00000044098.15	ENSMUST00000051139.13	4762	8	458	-6	11	6	multi-exon	FALSE	canonical	3	18	junction_7	18.1411697753019	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGTTTCAAAATGAAT	NA	False	NA	24	True	AATAAA	-21	NA	103821893	103873935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869932_103871889
Isoform_121682_5	chr3	+	959	6	ISM	ENSMUSG00000058388.15	ENSMUST00000150090.8	4179	18	-29	21584	-23	-1657	5prime_fragment	FALSE	canonical	3	72	junction_3	3.76297754444536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGTAAGGTGAGCTTGC	NA	False	NA	NA	False	NA	NA	NA	103875658	103893220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068
Isoform_121683_104	chr3	+	3217	19	FSM	ENSMUSG00000058388.15	ENSMUST00000063717.14	3327	19	111	-1	1	1	multi-exon	FALSE	canonical	3	55	junction_6	13.8399136513399	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGTTTCTAGGCTTTT	NA	False	NA	7	True	AATAAA	-17	NA	103875684	103914805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
Isoform_121685_4	chr3	+	3157	18	NIC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	23.3718252289562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103875656	103914804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
Isoform_121687_6	chr3	+	3081	18	FSM	ENSMUSG00000058388.15	ENSMUST00000055425.15	3060	18	-23	2	-21	0	multi-exon	FALSE	canonical	2	7	junction_4	22.8624592186075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103875660	103914804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
Isoform_121688_41	chr3	+	3168	18	NIC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	19.101984534304	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGTTTCTAGGCTTTT	NA	False	NA	7	True	AATAAA	-17	NA	103875676	103914805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
Isoform_121689_3	chr3	+	3027	17	NIC	ENSMUSG00000058388.15	novel	3006	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_5	25.1939352821269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875683	103914806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
Isoform_121690_1752	chr3	+	3221	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	-2	1207	-2	-1207	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCTTCCGCATGTT	NA	False	NA	20	True	AATAAA	-21	NA	104545981	104564571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
Isoform_121691_90	chr3	+	3266	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	-47	1207	-47	-1207	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCTTCCGCATGTT	NA	False	NA	20	True	AATAAA	-21	NA	104545936	104564571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
Isoform_121694_32	chr3	+	3373	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	-155	1208	-155	-1208	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCTTCCGCATGT	NA	False	NA	19	True	AATAAA	-20	NA	104545828	104564570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
Isoform_12170_5	chr11	-	708	4	FSM	ENSMUSG00000060923.6	ENSMUST00000074613.4	863	4	147	8	147	-8	multi-exon	FALSE	canonical	3	29	junction_1	6.84754619472471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTACCTTTGTGTACT	NA	False	NA	NA	False	AATAAA	-7	NA	30599440	30455998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_30456440_30582207_30582318_30583685_30583703_30599300
Isoform_12171_11	chr11	-	676	4	FSM	ENSMUSG00000060923.6	ENSMUST00000074613.4	863	4	181	6	181	-6	multi-exon	FALSE	canonical	3	29	junction_1	6.84754619472471	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTACCTTTGTGTACTGT	NA	False	NA	NA	False	AATAAA	-9	NA	30599406	30455996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_30456440_30582207_30582318_30583685_30583703_30599300
Isoform_121712_12	chr3	+	1867	9	ISM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	3	3	3	-3	intron_retention	TRUE	canonical	3	56	junction_1	13.9977676791694	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104688374	104693331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713
Isoform_121713_37	chr3	+	1716	10	FSM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	3	2	3	-2	multi-exon	FALSE	canonical	3	56	junction_1	13.4200881305638	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGTGTGTCATTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	104688374	104693332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
Isoform_121714_8	chr3	+	3035	8	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	26	-3	intron_retention	FALSE	canonical	3	74	junction_7	10.7551601284107	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104688397	104693331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713
Isoform_121718_150	chr3	+	1056	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	146	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696349	104701775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
Isoform_121719_20	chr3	+	1252	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	-52	2	-52	-2	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCAGCTTCCTGTCT	NA	False	NA	11	True	AATAAA	-18	NA	104696151	104701773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
Isoform_12172_25	chr11	-	1885	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	-182	829	1	148	multi-exon	TRUE	canonical	2	57	junction_8	15.3746121325012	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGTCTCACTTCATTC	NA	False	NA	-16	True	GATAAA	-13	NA	30904334	30881602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
Isoform_121720_9	chr3	+	1313	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	-111	0	-111	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696092	104701775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
Isoform_121721_4	chr3	+	1396	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	-196	2	-196	-2	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCAGCTTCCTGTCT	NA	False	NA	11	True	AATAAA	-18	NA	104696007	104701773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
Isoform_121722_10	chr3	+	1082	5	FSM	ENSMUSG00000002233.14	ENSMUST00000106787.8	959	5	-8	-115	-8	0	multi-exon	FALSE	canonical	2	16	junction_1	97.4586450757448	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696341	104701775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104696418_104699204_104699369_104699880_104700002_104700215_104700347_104701185
Isoform_121724_11	chr3	+	1984	15	NIC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	19.3639945701884	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGTGTATTTTCTTTGG	662	False	NA	31	True	AATACA	-42	NA	104772400	104834178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104788280_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
Isoform_121725_48	chr3	+	1944	14	FSM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	581	3203	4	1	multi-exon	FALSE	canonical	3	59	junction_11	6.94526359402813	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTAGTGTATTTTCTTTG	661	False	NA	30	True	AATACA	-41	NA	104772399	104834177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
Isoform_121728_95	chr3	+	1960	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-5	662	combination_of_known_junctions	FALSE	canonical	3	115	junction_8	275.350057782793	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105866818	105875505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478
Isoform_121733_1390	chr3	+	1989	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	134	1559	-5	674	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	1390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTTACTTATTACCT	NA	False	NA	24	True	AATAAA	-28	NA	105866818	105875517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_121734_51	chr3	+	3574	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	111	-3	-28	3	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTTTTGTTGTTGTC	NA	False	NA	15	True	AATAAA	-34	NA	105866795	105877079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_121735_264	chr3	+	2058	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	53	1571	53	662	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105866737	105875505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_121736_321	chr3	+	3183	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	110	389	-29	-389	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTGGGGGCTCTAT	NA	False	NA	6	True	AATAAA	-17	NA	105866794	105876687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_121737_68	chr3	+	3240	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	53	389	53	-389	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTGGGGGCTCTAT	NA	False	NA	6	True	AATAAA	-17	NA	105866737	105876687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_121748_49	chr3	+	2462	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-7	662	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105866816	105875505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
Isoform_121753_39	chr3	+	3070	8	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-3	662	intron_retention	FALSE	canonical	3	910	junction_4	51.9076888646114	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105866820	105875505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
Isoform_121761_3	chr3	+	1889	12	FSM	ENSMUSG00000027901.13	ENSMUST00000029508.11	4050	12	182	1979	163	9	multi-exon	FALSE	canonical	1	2	junction_1	1.52662323852242	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTAGGAGGCACTGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	106389928	106408367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_106390030_106394188_106394365_106395166_106395280_106395887_106395958_106397650_106397729_106398541_106398683_106399744_106399894_106402146_106402325_106406133_106406176_106406536_106406622_106407070_106407311_106407851
Isoform_121762_3	chr3	+	1465	10	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	-2	-911	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	49.8998997994986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTGTTTGCTACTTTA	NA	False	NA	9	True	AATAAA	-18	NA	106455140	106481250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_106455237_106457814_106457992_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
Isoform_121764_14	chr3	+	2188	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	37	1046	4	-1	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTTGTCATGAAAATG	NA	False	NA	NA	False	AATAAA	-13	NA	106455150	106482160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
Isoform_121766_21	chr3	+	1276	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	36	1959	3	-914	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTAGTGTTTGCTACT	NA	False	NA	6	True	AATAAA	-15	NA	106455149	106481247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
Isoform_121767_17	chr3	+	1807	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	36	1428	3	-383	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTCAGTAGTGTAAAT	NA	False	NA	7	True	AATAAA	-16	NA	106455149	106481778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
Isoform_12177_29	chr11	-	1306	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	8	1	8	-1	multi-exon	FALSE	canonical	3	30	junction_1	6	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCTAAGTGTCATTTC	NA	False	NA	NA	False	AATAAA	-32	NA	30936342	30926707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_30927747_30929564_30929601_30936111
Isoform_121771_6	chr3	+	1808	9	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	1	-381	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	37.0506410200957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCAGTAGTGTAAATTA	NA	False	NA	9	True	AATAAA	-18	NA	106455147	106481780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_106455237_106459471_106459597_106462482_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
Isoform_121773_6	chr3	+	2200	9	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	1	11	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	37.0506410200957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGATTGTAAAGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	106455147	106482172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_106455237_106459471_106459597_106462482_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
Isoform_121775_11	chr3	+	1588	3	FSM	ENSMUSG00000056260.16	ENSMUST00000098751.10	929	3	-19	-640	-19	-30	multi-exon	FALSE	canonical	3	7	junction_1	16.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATGTATTCAGATATT	NA	False	NA	-2	True	AATAAA	-10	NA	106592283	106643860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_106592450_106641673_106641956_106642720
Isoform_121776_5	chr3	+	2969	4	NIC	ENSMUSG00000056260.16	novel	674	2	NA	NA	-77	0	intron_retention	FALSE	canonical	1	2	junction_1	15.6276108929747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTATGGCTTTGTTT	NA	False	NA	28	True	AATAAA	-40	NA	106629131	106643890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_106629169_106638978_106640459_106641673_106641956_106642720
Isoform_121777_8	chr3	+	3224	4	FSM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	-118	-3	-75	0	multi-exon	FALSE	canonical	2	11	junction_1	11.8415464455544	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-43	NA	106629133	106643893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_106629423_106638978_106640459_106641673_106641956_106642720
Isoform_121779_7	chr3	+	1634	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	33	2	0	1	multi-exon	FALSE	canonical	3	21	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTATGGCTTTGTTTT	NA	False	NA	29	True	AATAAA	-41	NA	106629241	106643891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_106629423_106641673_106641956_106642720
Isoform_121782_598	chr3	+	735	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	6	2	6	1	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGTTCATTTCTGGT	3157	False	NA	10	True	AATAAA	-14	NA	107186320	107191396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
Isoform_121785_32	chr3	+	928	8	FSM	ENSMUSG00000004032.11	ENSMUST00000004134.11	945	8	16	1	1	-1	multi-exon	FALSE	canonical	3	47	junction_1	3.52252228741084	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGTCTAGATGGATTT	NA	False	NA	10	True	AATAAA	-15	NA	107803152	107806001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_107803315_107803613_107803690_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
Isoform_121787_11	chr3	+	2312	2	FSM	ENSMUSG00000050947.10	ENSMUST00000050909.7	5030	2	-21	2739	-21	-2730	multi-exon	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGAGGTTGTGTGTG	515	False	NA	NA	False	AAAACA	-31	NA	108093629	108096353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108093995_108094406
Isoform_121788_5	chr3	+	5036	2	FSM	ENSMUSG00000050947.10	ENSMUST00000050909.7	5030	2	-3	-3	-3	2	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGGTTGGTTTATTTA	533	False	NA	21	True	ATTAAA	-28	NA	108093647	108099095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108093995_108094406
Isoform_121789_8	chr3	+	5022	2	FSM	ENSMUSG00000050947.10	ENSMUST00000106656.2	5482	2	-50	510	-27	0	multi-exon	FALSE	canonical	2	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTGTGGTTGGTTTAT	509	False	NA	18	True	ATTAAA	-25	NA	108093623	108099092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108093995_108094441
Isoform_121791_2667	chr3	+	991	9	FSM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	242	6	242	-6	multi-exon	FALSE	canonical	3	2544	junction_4	248.775972262194	2667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTGTTAATAGTCT	NA	False	NA	5	True	AATAAA	-9	NA	108164483	108187284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
Isoform_121799_4	chr3	+	2877	21	FSM	ENSMUSG00000068747.15	ENSMUST00000135636.6	6836	21	3	3956	3	-3951	multi-exon	FALSE	canonical	2	6	junction_17	14.3960932200372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTTTGTAAGACT	4983	False	NA	17	True	TTTAAA	-23	NA	108191400	108264803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108262787_108262887_108263546_108263654_108263892_108264005_108264544
Isoform_12180_17	chr11	-	1259	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	2	-243	2	-2	multi-exon	FALSE	canonical	3	22	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTCTAAGTGTCATTT	NA	False	NA	NA	False	AATAAA	-31	NA	30936332	30926708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_30927747_30936111
Isoform_121800_13	chr3	+	2779	20	FSM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	-8	4025	1	-3952	multi-exon	FALSE	canonical	3	21	junction_7	9.89893527949294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTCTTTTGTAAGAC	4981	False	NA	16	True	TTTAAA	-22	NA	108191398	108264802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
Isoform_121801_8	chr3	+	6795	20	FSM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	8	-7	8	7	multi-exon	FALSE	canonical	3	21	junction_7	9.89893527949294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGTAAGCTACAGTTT	4997	False	NA	30	True	AATAAA	-30	NA	108191414	108268834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
Isoform_121803_3	chr3	+	3436	21	NNC	ENSMUSG00000068747.15	novel	6836	21	NA	NA	-4	-3396	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	14.2123186004255	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTCAGGCTGTACTTT	4976	False	NA	NA	False	ATTAAA	-22	NA	108191393	108265358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108262787_108262887_108263546_108263654_108263892_108264005_108264544
Isoform_121808_162	chr3	+	1642	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	-23	68	-3	-16	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7029	False	NA	0	True	AATAAA	-8	NA	108291151	108295479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_121811_24	chr3	+	1725	7	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	2	-16	intron_retention	FALSE	canonical	3	155	junction_1	118.602510747267	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7034	False	NA	0	True	AATAAA	-8	NA	108291156	108295479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_108291212_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_121816_169	chr3	+	1626	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	44	16	4	-16	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7076	False	NA	0	True	AATAAA	-8	NA	108291198	108295479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_121817_126	chr3	+	1404	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	-3	285	-3	-285	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATCTGTCTCCTTCCATC	7029	False	NA	19	True	AATAAA	-15	NA	108291151	108295210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_121821_11	chr3	+	2540	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	1	-16	intron_retention	FALSE	canonical	3	329	junction_1	62.0118716232805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7046	False	NA	0	True	AATAAA	-8	NA	108291168	108295479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_121823_18	chr3	+	1744	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	1	-16	intron_retention	FALSE	canonical	3	329	junction_1	60.1405760605009	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7046	False	NA	0	True	AATAAA	-8	NA	108291168	108295479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_108291243_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_121839_166	chr3	+	1283	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	3	1157	3	-4	multi-exon	FALSE	canonical	3	149	junction_1	10.4986771653491	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTTGAGTTTGTGT	NA	False	NA	10	True	AATAAA	-19	NA	108479017	108489381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
Isoform_12184_3	chr11	-	3646	3	ISM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	2	2135	2	-1456	intron_retention	FALSE	canonical	3	131	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACTGGGTCACAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	31320072	31309441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_31310529_31315331_31315544_31317725
Isoform_121841_6	chr3	+	1203	3	NIC	ENSMUSG00000048100.14	novel	2443	4	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	86	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCAGTACTTGAGTTTG	NA	False	NA	7	True	AATAAA	-16	NA	108479015	108489378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_108479065_108485431_108485530_108488322
Isoform_121842_8	chr3	+	1287	4	FSM	ENSMUSG00000048100.14	ENSMUST00000131814.8	596	4	4	-695	3	-4	multi-exon	FALSE	canonical	3	6	junction_1	77.7988860245869	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTTGAGTTTGTGT	NA	False	NA	10	True	AATAAA	-19	NA	108479017	108489381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108479069_108480195_108480275_108485431_108485530_108488322
Isoform_121843_10	chr3	+	1648	4	FSM	ENSMUSG00000048100.14	ENSMUST00000056292.8	1655	4	3	4	3	-4	multi-exon	TRUE	canonical	2	8	junction_1	76.856287243718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTTGAGTTTGTGT	NA	False	NA	10	True	AATAAA	-19	NA	108479017	108489381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108479430_108480195_108480275_108485431_108485530_108488322
Isoform_121845_6	chr3	+	2375	4	NNC	ENSMUSG00000048100.14	novel	1655	4	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	80.1554046143421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTTGAGTTTGTGT	NA	False	NA	10	True	AATAAA	-19	NA	108479017	108489381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_108479618_108479656_108480275_108485431_108485530_108488322
Isoform_121847_82	chr3	+	4139	15	FSM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	82	1	9	-1	multi-exon	FALSE	canonical	3	33	junction_5	8.19064922297845	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCCTTTTCTCACGGT	NA	False	NA	2	True	AATAAA	-17	NA	108498676	108553034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
Isoform_121848_19	chr3	+	4135	15	NIC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	13.7300876225335	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCCTTTTCTCACGG	NA	False	NA	1	True	AATAAA	-16	NA	108498676	108553033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
Isoform_121850_93	chr3	+	2015	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	28	0	-8	0	multi-exon	FALSE	canonical	3	66	junction_1	36.8117839559091	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6624	False	NA	6	True	AATAAA	-18	NA	108561256	108586156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
Isoform_121852_11	chr3	+	3648	11	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-9	0	intron_retention	TRUE	canonical	3	126	junction_1	24.3014402865345	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6623	False	NA	6	True	AATAAA	-18	NA	108561255	108586156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000
Isoform_121854_206	chr3	+	2086	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	23.1716555264122	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6624	False	NA	6	True	AATAAA	-18	NA	108561256	108586156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
Isoform_121859_8	chr3	+	3402	10	FSM	ENSMUSG00000040322.11	ENSMUST00000029477.11	3431	10	24	5	11	-5	multi-exon	FALSE	canonical	1	3	junction_3	3.55902608401044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGCTTGTTTTCTAA	4499	False	NA	NA	False	ATTAAA	-17	NA	109030488	109075768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641
Isoform_12186_102	chr11	-	3350	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	2	588	2	91	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGCTCCTTGTGTGATT	NA	False	NA	-22	True	AGTAAA	-19	NA	31320072	31307894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
Isoform_121860_4	chr3	+	3456	10	FSM	ENSMUSG00000040322.11	ENSMUST00000029477.11	3431	10	-28	3	-28	-3	multi-exon	FALSE	canonical	1	3	junction_3	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTTGTTTTCTAATT	4447	False	NA	NA	False	ATTAAA	-19	NA	109030436	109075770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641
Isoform_121861_3	chr3	+	1110	2	ISM	ENSMUSG00000033554.18	ENSMUST00000199970.2	520	3	-25	3549	-3	962	5prime_fragment	FALSE	canonical	3	271	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGT	7745	False	NA	NA	False	NA	NA	NA	115681818	115683090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_115681927_115682088
Isoform_121862_77	chr3	+	1350	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	-18	244	0	0	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	7740	False	NA	8	True	AATAAA	-18	NA	115681813	115722737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
Isoform_121864_13	chr3	+	1585	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	-17	8	1	-8	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTAGCAGTCAG	7741	False	NA	NA	False	NA	NA	NA	115681814	115722973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
Isoform_121866_3	chr3	+	2380	6	NNC	ENSMUSG00000027963.15	novel	3000	5	NA	NA	1	-630	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	25.9044397739075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAACTTCTGGAAGAAT	18	False	NA	NA	False	AATAAA	-9	NA	115801134	115821979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_115801532_115804270_115804346_115804485_115804577_115817655_115818084_115818973_115819045_115820661
Isoform_121868_32	chr3	+	2988	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	17	-5	1	5	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGGTGACGTGTTCCG	11	False	NA	28	True	AATAAA	-39	NA	115801127	115822671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
Isoform_121876_6	chr3	+	2683	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	83	74	83	-74	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGCTTTGTCCACATT	135	False	NA	24	True	ATTAAA	-12	NA	115801951	115822535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
Isoform_121877_4	chr3	+	2784	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	108	-52	108	-5	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCGGGTGCTCTGGTG	160	False	NA	18	True	AATAAA	-29	NA	115801976	115822661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
Isoform_121884_41	chr3	+	3300	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	1	0	1	0	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	10	True	AATAAA	-19	NA	116306719	116343630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
Isoform_121885_223	chr3	+	3244	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	57	0	-1	0	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	10	True	AATAAA	-19	NA	116306775	116343630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
Isoform_121889_15	chr3	+	3159	10	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	68.4805099784864	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTATGCCTTCATAG	NA	False	NA	8	True	AATAAA	-17	NA	116306782	116343628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_116306841_116313885_116314010_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
Isoform_121890_10	chr3	+	3118	10	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-4	-5	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	66.6374009838059	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTTTGTATGCCTTCA	NA	False	NA	5	True	AATAAA	-14	NA	116306772	116343625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_116306841_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
Isoform_121893_7	chr3	+	3116	9	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-22	-7	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	69.7387983836831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATACTTTGTATGCCTT	NA	False	NA	3	True	AATAAA	-12	NA	116306696	116343623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_116306841_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
Isoform_121894_13	chr3	+	3043	9	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	69.7387983836831	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTATGCCTTCATAGT	NA	False	NA	9	True	AATAAA	-18	NA	116306775	116343629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_116306841_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
Isoform_121896_3	chr3	+	663	4	ISM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	20	15593	-1	768	5prime_fragment	FALSE	canonical	3	61	junction_2	7.25718035235908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATTTCTTATTTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	116388650	116399658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313
Isoform_121901_3	chr3	+	1958	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	-44	-20	-44	20	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTCAGTCCACTCTTGCT	NA	False	NA	NA	False	TATAAA	-42	NA	116388586	116415271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
Isoform_121903_3	chr3	+	1883	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	28	-17	0	17	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGCTCAGTCCACTCTT	NA	False	NA	NA	False	TATAAA	-39	NA	116388658	116415268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
Isoform_121905_3	chr3	+	3421	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	-58	-1469	-58	1469	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCCGCATTGTTCA	NA	False	NA	16	True	NA	NA	NA	116388572	116416720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
Isoform_121907_18	chr3	+	4199	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	-2	-1793	-2	-64	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCATGTTTAGGAAATAA	NA	False	NA	19	True	AATAAA	-30	NA	116388654	116424589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
Isoform_121921_11	chr3	+	2079	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	-40	-2	-40	2	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGGTATTTTAAGCACT	NA	False	NA	NA	False	NA	NA	NA	121085381	121156745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
Isoform_121922_40	chr3	+	993	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	-30	1074	-30	313	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGTTCTCTTGGGAC	NA	False	NA	25	True	AATAAA	-26	NA	121085391	121155669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
Isoform_121929_5902	chr3	+	2021	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	22	6	22	2	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	5902	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACCACAGGCTGGTTA	NA	False	NA	21	True	AATAAA	-21	NA	121220167	121251850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
Isoform_121964_85	chr3	+	1876	6	FSM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	-9	5	-9	-5	multi-exon	FALSE	canonical	3	41	junction_2	13.6176356244394	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATCGCATTTATATCTT	NA	False	NA	NA	False	AATAAA	-17	NA	121517176	121528692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029_121526190_121527754
Isoform_121965_19	chr3	+	1904	6	FSM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	-37	5	-37	-5	multi-exon	FALSE	canonical	3	41	junction_2	13.6176356244394	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATCGCATTTATATCTT	NA	False	NA	NA	False	AATAAA	-17	NA	121517148	121528692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029_121526190_121527754
Isoform_121967_9	chr3	+	5188	23	FSM	ENSMUSG00000039831.17	ENSMUST00000037958.14	5787	23	-2	601	-2	-2	multi-exon	TRUE	canonical	2	6	junction_1	3.88922010920586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTCAGGTTCTTATG	NA	False	NA	23	True	GATAAA	-24	NA	121746875	121809801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_121747054_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
Isoform_121969_6	chr3	+	5138	23	NIC	ENSMUSG00000039831.17	novel	2503	20	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	3.57707346100895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTCAGGTTCTTATG	NA	False	NA	23	True	GATAAA	-24	NA	121761478	121809801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_121761607_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
Isoform_12197_710	chr11	-	1378	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	14	2	14	-2	multi-exon	FALSE	canonical	3	568	junction_1	23.4141457717813	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTTTGACGATCTTTC	NA	False	NA	-31	True	AATAAA	-20	NA	31621871	31615182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
Isoform_121971_421	chr3	+	1752	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	42	3795	42	-6	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATTTAATGTGTGTGT	NA	False	NA	10	True	AATAAA	-22	NA	122039247	122060586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
Isoform_121972_90	chr3	+	1817	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	-24	3796	-24	-7	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAATTTAATGTGTGTG	NA	False	NA	9	True	AATAAA	-21	NA	122039181	122060585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
Isoform_121973_78	chr3	+	4794	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	42	753	42	-753	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGCCATAAAGCTATTC	NA	False	NA	NA	False	AATAAA	-19	NA	122039247	122063628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
Isoform_121976_33	chr3	+	1896	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	-102	3795	-102	-6	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATTTAATGTGTGTGT	NA	False	NA	10	True	AATAAA	-22	NA	122039103	122060586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
Isoform_121986_13	chr3	+	4860	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	-24	753	-24	-753	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGCCATAAAGCTATTC	NA	False	NA	NA	False	AATAAA	-19	NA	122039181	122063628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
Isoform_122006_1793	chr3	+	2398	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	23	8	-7	-8	multi-exon	FALSE	canonical	3	1082	junction_6	112.264073604258	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATTGTGTGCCTCT	NA	False	NA	15	True	AATAAA	-11	NA	122068059	122078912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
Isoform_122009_121	chr3	+	2431	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	-9	7	-9	-7	multi-exon	FALSE	canonical	3	1082	junction_6	112.264073604258	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAATTGTGTGCCTCTT	NA	False	NA	16	True	AATAAA	-12	NA	122068027	122078913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
Isoform_12202_27	chr11	-	2246	3	FSM	ENSMUSG00000044502.17	ENSMUST00000109415.2	799	3	-146	-1301	12	-5	multi-exon	FALSE	canonical	3	591	junction_1	17	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTGTTTGACGATCT	NA	False	NA	-34	True	AATAAA	-17	NA	31621873	31615185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_31616934_31619243_31619369_31621500
Isoform_122023_355	chr3	+	3086	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	215	10	170	-10	multi-exon	FALSE	canonical	3	116	junction_1	21.0877740616698	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTATCCTGTCTCT	NA	False	NA	NA	False	AATATA	-12	NA	122213641	122323830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
Isoform_122024_274	chr3	+	3306	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	3	2	3	-2	multi-exon	TRUE	canonical	3	116	junction_1	21.0877740616698	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTCTCTTTATTATT	NA	False	NA	NA	False	AATATA	-20	NA	122213429	122323838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
Isoform_122029_88	chr3	+	2494	8	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	88270	10	-16	-10	3prime_fragment	FALSE	canonical	3	148	junction_2	11.5475945016921	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTATCCTGTCTCT	7541	False	NA	NA	False	AATATA	-12	NA	122301696	122323830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
Isoform_12203_75	chr11	-	2925	18	FSM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	21	0	1	0	multi-exon	TRUE	canonical	0	0	junction_2	19.5534933028863	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172279	32159584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
Isoform_122033_14	chr3	+	1020	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	138	2	138	-2	multi-exon	FALSE	canonical	3	1657	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGTTTCACACTGTGT	NA	False	NA	20	True	NA	NA	NA	122717989	122719831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122718306_122719127
Isoform_122037_28	chr3	+	3890	23	FSM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	13	0	-11	0	multi-exon	FALSE	canonical	3	54	junction_9	11.2449253935915	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	18	True	AATAAA	-18	NA	123061116	123159290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
Isoform_122038_82	chr3	+	3857	23	FSM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	46	0	11	0	multi-exon	FALSE	canonical	3	54	junction_9	11.2449253935915	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	18	True	AATAAA	-18	NA	123061149	123159290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
Isoform_122039_7	chr3	+	4050	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.672942719547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTACTGTGTTTTA	NA	False	NA	13	True	AATAAA	-13	NA	123061099	123159285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_123061186_123061838_123061987_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
Isoform_122044_4	chr3	+	4108	19	FSM	ENSMUSG00000053819.17	ENSMUST00000199300.5	5524	19	3	1413	0	0	multi-exon	FALSE	canonical	2	3	junction_9	3.34119443416775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCATTTTTATTTC	NA	False	NA	9	True	AATAAA	-19	NA	126390658	126638562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
Isoform_122045_7	chr3	+	4046	18	FSM	ENSMUSG00000053819.17	ENSMUST00000106400.9	2722	18	-115	-1209	-16	1	multi-exon	TRUE	canonical	1	3	junction_9	3.31714639526393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTCCATTTTTATTT	NA	False	NA	8	True	AATAAA	-18	NA	126390630	126638561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126636406
Isoform_122046_6	chr3	+	946	5	ISM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-163	3414	-19	-3414	5prime_fragment	FALSE	canonical	3	63	junction_3	5.7227615711298	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAGAATGG	NA	False	NA	NA	False	AATAAA	-6	NA	127347118	127355073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544
Isoform_122048_44	chr3	+	3956	6	FSM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-153	1	-9	-1	multi-exon	FALSE	canonical	3	40	junction_5	13.6	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTATGTATGTGCA	NA	False	NA	NA	False	NA	NA	NA	127347128	127358486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
Isoform_122049_9	chr3	+	5958	26	FSM	ENSMUSG00000051278.13	ENSMUST00000043108.9	7046	26	-10	1098	-10	-62	multi-exon	FALSE	canonical	1	17	junction_9	21.9453867589523	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTACTGAATAAGTGCA	NA	False	NA	NA	False	NA	NA	NA	127347127	127410572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
Isoform_12205_700	chr11	-	2086	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	73	706	-5	266	multi-exon	FALSE	canonical	3	148	junction_6	11.6770786871831	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTGTGTATGTGTG	4640	False	NA	-3	True	AATATA	-15	NA	32217634	32182668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
Isoform_122050_3	chr3	+	7067	26	FSM	ENSMUSG00000051278.13	ENSMUST00000043108.9	7046	26	-19	-2	-19	0	multi-exon	TRUE	canonical	1	17	junction_9	21.9453867589523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTATGTGGAAAAAAAAG	NA	False	NA	NA	False	ATTAAA	-22	NA	127347118	127411672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
Isoform_122051_3	chr3	+	6450	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-10	-44	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_6	22.5920339943087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCGAAAATGTGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	127347127	127410590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
Isoform_122052_4	chr3	+	2370	3	FSM	ENSMUSG00000028023.17	ENSMUST00000042587.12	2271	3	-101	2	-61	-2	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTGGTCTGGATTCTT	NA	False	NA	NA	False	AGTAAA	-12	NA	129007519	129013235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129008431_129009287_129009494_129011982
Isoform_122053_428	chr3	+	2391	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	19	3541	19	2	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129326053	129428603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
Isoform_122061_272	chr3	+	5928	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	19	4	19	-4	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTTTCTAGTTCTTT	NA	False	NA	13	True	AATAAA	-21	NA	129326053	129432140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
Isoform_122068_101	chr3	+	2462	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	131	17	100	2	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129326134	129428603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
Isoform_12207_18	chr11	-	2711	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	72	82	-6	9	multi-exon	TRUE	canonical	3	148	junction_6	11.6770786871831	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGGCTGAGACTTGGG	4639	False	NA	NA	False	GATAAA	-21	NA	32217635	32182044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
Isoform_122077_59	chr3	+	5997	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	133	-3520	102	-4	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTTTCTAGTTCTTT	NA	False	NA	13	True	AATAAA	-21	NA	129326136	129432140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
Isoform_122089_35	chr3	+	473	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4161	1993	4161	-1993	3prime_fragment	FALSE	canonical	3	92	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTAATGGGATCCCTGT	NA	False	NA	8	True	NA	NA	NA	129551567	129555540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_129551788_129555287
Isoform_122090_13	chr3	+	2466	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4162	-1	4162	1	3prime_fragment	FALSE	canonical	3	92	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGCACTGTCTAATT	NA	False	NA	3	True	NA	NA	NA	129551568	129557534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_129551788_129555287
Isoform_122091_38	chr3	+	1564	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	-12	9	-12	-5	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATCTCCTGAGAGTGTT	NA	False	NA	16	True	AATAAA	-16	NA	129672242	129689465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
Isoform_122092_170	chr3	+	991	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	42	528	42	340	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGGACTTTTCAGCAT	NA	False	NA	17	True	AATAAA	-24	NA	129672296	129688946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
Isoform_122093_164	chr3	+	1510	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	42	9	42	-5	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATCTCCTGAGAGTGTT	NA	False	NA	16	True	AATAAA	-16	NA	129672296	129689465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
Isoform_122094_48	chr3	+	1034	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	-8	535	-8	333	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCATTGTAAGGACTTT	NA	False	NA	10	True	AATAAA	-17	NA	129672246	129688939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
Isoform_122096_113	chr3	+	1246	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	57	153	-19	-153	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACACTTTCTAATTCCTA	NA	False	NA	7	True	AATAAA	-16	NA	129695130	129707599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
Isoform_122097_19	chr3	+	1426	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	30	0	-3	0	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGGCACTCTGAGGAT	NA	False	NA	NA	False	AATAAA	-14	NA	129695103	129707752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
Isoform_122098_23	chr3	+	3526	11	FSM	ENSMUSG00000027985.15	ENSMUST00000066849.13	3398	11	-155	27	-155	-27	multi-exon	FALSE	canonical	3	14	junction_9	10.581115253129	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAATAAATTTGCTCAT	NA	False	NA	NA	False	AATAAA	-26	NA	130903964	131017978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
Isoform_122099_27	chr3	+	3512	10	FSM	ENSMUSG00000027985.15	ENSMUST00000106341.9	3357	10	-155	0	-155	0	multi-exon	FALSE	canonical	3	22	junction_9	8.71779788708135	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTGGTGAACTGAACC	NA	False	NA	NA	False	AATAAA	-17	NA	130903964	131018005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_131016724
Isoform_122101_3	chr3	+	1585	3	ISM	ENSMUSG00000027985.15	ENSMUST00000106341.9	3357	10	89653	24	86268	-24	3prime_fragment	FALSE	canonical	3	22	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAAATTTGCTCATAAT	NA	False	NA	NA	False	AATAAA	-29	NA	130993772	131017981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_130994052_130997904_130997954_131016724
Isoform_122102_15	chr3	+	2699	13	FSM	ENSMUSG00000028032.14	ENSMUST00000199878.5	2648	13	-50	-1	-19	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8531484588242	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	False	NA	7	True	AATAAA	-18	NA	131270606	131349432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_131270745_131273262_131273440_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
Isoform_122103_179	chr3	+	2500	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	97	3	0	-2	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTATGGTTTGTGTGCA	NA	False	NA	4	True	AATAAA	-15	NA	131270625	131349429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
Isoform_122104_9	chr3	+	2612	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	-12	0	-12	0	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	False	NA	7	True	AATAAA	-18	NA	131270516	131349432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
Isoform_122107_14	chr3	+	2961	3	FSM	ENSMUSG00000028030.13	ENSMUST00000198147.5	5195	3	-50	2284	-26	-2284	multi-exon	FALSE	canonical	1	21	junction_1	47	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATGACAAAAATACCT	NA	False	NA	NA	False	AATAAA	-38	NA	132389878	132402606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_132390156_132392532_132392754_132400143
Isoform_122109_74	chr3	+	4169	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	-3	2412	-3	770	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	24	True	ATTAAA	-28	NA	132389901	132545037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
Isoform_122110_33	chr3	+	6509	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	-5	74	-5	-74	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGTGGTGTATAGGAG	NA	False	NA	9	True	AATAAA	-29	NA	132389899	132547375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
Isoform_122115_16	chr3	+	1641	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	13	1447	13	-1447	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATCTCTATTGTTTGTT	NA	False	NA	3	True	AATAAA	-9	NA	132797613	132815302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
Isoform_122117_145	chr3	+	1561	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	96	1444	-2	-1444	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTATTGTTTGTTACA	NA	False	NA	6	True	AATAAA	-12	NA	132797696	132815305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
Isoform_122118_40	chr3	+	3001	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	96	4	-2	-4	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGCCTGTAGATGTT	NA	False	NA	NA	False	AATAAA	-43	NA	132797696	132816745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
Isoform_122124_686	chr3	+	1208	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	8	10	-4	1	multi-exon	FALSE	canonical	3	471	junction_4	36.8801946894343	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGAACTTCTCTTTT	NA	False	NA	11	True	AATAAA	-18	NA	133015878	133083829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
Isoform_122125_33	chr3	+	1385	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	-2	-157	-2	0	multi-exon	FALSE	canonical	3	471	junction_4	36.8801946894343	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTATATTCATAACTTC	NA	False	NA	NA	False	AATAAA	-14	NA	133015868	133083996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
Isoform_122127_23	chr3	+	1247	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	-32	11	-32	0	multi-exon	TRUE	canonical	3	471	junction_4	36.8801946894343	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGAACTTCTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	133015838	133083828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
Isoform_122130_20	chr3	+	1192	12	FSM	ENSMUSG00000028013.17	ENSMUST00000122334.8	1368	12	12	164	12	4	multi-exon	FALSE	canonical	3	35	junction_11	149.418321201731	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTCTCTTTTATA	NA	False	NA	14	True	AATAAA	-21	NA	133015894	133083832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083610
Isoform_122143_111	chr3	+	7742	46	FSM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	78	90	78	-90	multi-exon	FALSE	canonical	0	0	junction_28	46.2867818371455	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAATCTTTCCAGAT	NA	False	NA	11	True	AATAAA	-13	NA	134918375	134979282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
Isoform_122144_80	chr3	+	7767	46	FSM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	56	87	56	-87	multi-exon	FALSE	canonical	0	0	junction_28	46.2867818371455	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134918353	134979285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
Isoform_122145_4	chr3	+	7589	45	NIC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	74	-91	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	54.6817048287195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTAATCTTTCCAGA	NA	False	NA	10	True	AATAAA	-12	NA	134918371	134979281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
Isoform_122161_34	chr3	+	1096	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	74	2	12	1	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTAGTTTTTTTTCTT	NA	False	NA	19	True	AATAAA	-29	NA	134987055	135010185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
Isoform_122162_3	chr3	+	1170	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	0	2	0	1	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTAGTTTTTTTTCTT	NA	False	NA	19	True	AATAAA	-29	NA	134986981	135010185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
Isoform_122163_19	chr3	+	993	10	FSM	ENSMUSG00000028167.16	ENSMUST00000029817.11	1059	10	64	2	42	1	multi-exon	FALSE	canonical	3	27	junction_1	15.3099660916801	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTAGTTTTTTTTCTT	NA	False	NA	19	True	AATAAA	-29	NA	134987085	135010185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_134987130_134991348_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
Isoform_122166_15	chr3	+	1395	7	ISM	ENSMUSG00000050150.17	ENSMUST00000160460.8	2072	11	-8	18608	4	50	5prime_fragment	FALSE	canonical	3	60	junction_5	29.9146935282461	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTGTATAGCCAGGTTC	NA	False	NA	4	True	ATTAAA	-16	NA	135053810	135080236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
Isoform_122167_7	chr3	+	2090	12	NIC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	36.7153445976695	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGCTATGTCTCATGA	NA	False	NA	2	True	ATTAAA	-14	NA	135053810	135103583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135103356
Isoform_122168_10	chr3	+	1852	11	NIC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	3	1034	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	33.6964389809962	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCTTTATTTTTGTT	NA	False	NA	5	True	AATACA	-15	NA	135053809	135099878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
Isoform_122175_3	chr3	+	1623	7	NIC	ENSMUSG00000050150.17	novel	1545	6	NA	NA	-6	-22	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	33.6324083123539	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	135053783	135080440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
Isoform_122176_3	chr3	+	1953	11	NIC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	-22	1035	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	35.4987323717341	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTTTATTTTTGTTT	NA	False	NA	6	True	AATACA	-16	NA	135053767	135099879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720
Isoform_122177_5	chr3	+	2087	12	NIC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	36.422679339224	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGCTATGTCTCATGA	NA	False	NA	2	True	ATTAAA	-14	NA	135053810	135103583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135103356
Isoform_122179_4	chr3	+	1013	3	ISM	ENSMUSG00000050150.17	ENSMUST00000159658.8	588	4	-7	13672	-7	1	5prime_fragment	FALSE	canonical	3	17	junction_1	66	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATTGTATTCATTGT	NA	False	NA	NA	False	NA	NA	NA	135053782	135064068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_135053884_135060771_135060833_135063217
Isoform_122180_96	chr3	+	3594	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	52	-2134	-30	-6	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACACTTTGGTCTTACTC	NA	False	NA	-1	True	ATTAAA	-12	NA	135144046	135173953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122182_110	chr3	+	2077	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	52	-617	-30	0	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144046	135172436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122185_303	chr3	+	1462	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	52	-2	-30	2	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135144046	135171821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122189_64	chr3	+	1515	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	-1	-2	-1	2	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135143993	135171821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122192_41	chr3	+	2131	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	-2	-617	-2	0	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135143992	135172436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122196_41	chr3	+	3589	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	61	-2912	61	0	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144137	135173959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122197_53	chr3	+	2066	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	61	-1389	61	0	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144137	135172436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122198_141	chr3	+	1448	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	62	-772	62	0	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144138	135171819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_1222_483	SIRV7	-	2246	6	FSM	SIRV7A	SIRV702	2247	6	1	0	1	0	multi-exon	FALSE	canonical	3	229	junction_3	1351.00954844886	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114915	1000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
Isoform_122217_190	chr3	+	2173	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	54	277	1	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTGTTTGACAAGT	NA	False	NA	11	True	AATAAA	-12	NA	135144294	135172434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122218_122	chr3	+	3663	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	89	-1248	4	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144329	135173959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122223_354	chr3	+	1558	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	54	892	1	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144294	135171819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122234_197	chr3	+	2123	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	187	1523	-2	0	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144512	135172436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122237_134	chr3	+	3640	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	187	6	-2	-6	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACACTTTGGTCTTACTC	NA	False	NA	-1	True	ATTAAA	-12	NA	135144512	135173953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122239_439	chr3	+	1501	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	194	2138	5	2	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135144519	135171821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122243_61	chr3	+	1729	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	-31	2135	1	5	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCTGCCTGGATTAATC	NA	False	NA	78	True	AATAAA	-18	NA	135144294	135171824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122266_53	chr3	+	1927	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-25	613	-25	2	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135144872	135171821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122272_81	chr3	+	1899	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-3	619	-3	-4	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAGTTAGCTGCCT	NA	False	NA	69	True	AATAAA	-9	NA	135144894	135171815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_122302_278	chr3	+	3607	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	4	64	4	-64	multi-exon	TRUE	canonical	3	85	junction_8	25.1755554804656	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAACTTGAAAGTTTATT	NA	False	NA	20	True	TATAAA	-7	NA	135191375	135277101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
Isoform_122303_67	chr3	+	3663	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	4	8	4	-8	multi-exon	FALSE	canonical	3	85	junction_8	25.1755554804656	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAAAGCTGCATTGAAC	NA	False	NA	3	True	AATAAA	-11	NA	135191375	135277157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
Isoform_122305_16	chr3	+	2941	12	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	37307	65	-17	-65	3prime_fragment	FALSE	canonical	3	85	junction_3	26.9876004585883	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACAACTTGAAAGTTTAT	NA	False	NA	19	True	TATAAA	-6	NA	135228678	135277100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
Isoform_122307_10	chr3	+	2985	12	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	37326	2	2	-2	3prime_fragment	FALSE	canonical	3	85	junction_3	26.9876004585883	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGCATTGAACACCATG	NA	False	NA	9	True	AATAAA	-17	NA	135228697	135277163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
Isoform_12231_17931	chr11	-	1276	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	129	228	0	-4	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	17931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCACTGTTTCTATTT	NA	False	NA	-37	True	AATAAA	-16	NA	33113077	33102514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
Isoform_122316_111	chr3	+	2824	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-15	1949	-15	-1	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	TATAAA	-17	NA	136375869	136641539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
Isoform_122326_40	chr3	+	4765	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-15	8	-15	-8	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCAGTCGATGTGAGT	NA	False	NA	5	True	AATAAA	-14	NA	136375869	136643480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
Isoform_122328_63	chr3	+	3888	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-11	881	-11	-881	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGCGCATCCTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	136375873	136642607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
Isoform_122330_29	chr3	+	4793	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-41	6	-41	-6	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGTCGATGTGAGTAT	NA	False	NA	7	True	AATAAA	-16	NA	136375843	136643482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
Isoform_122336_3	chr3	+	2800	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	59	-137	59	137	multi-exon	FALSE	canonical	3	67	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGTATTTCTCATATT	NA	False	NA	NA	False	AATAAA	-20	NA	137329491	137334231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137329645_137329892_137330035_137331726
Isoform_122338_26	chr3	+	2653	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	67	2	67	-2	multi-exon	FALSE	canonical	3	67	junction_2	6.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCCTTGGCCTCTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	137329499	137334092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137329645_137329892_137330035_137331726
Isoform_122344_6103	chr3	+	864	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	102	103	-2	1	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	6103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGCTTTAAACTTGCTT	NA	False	NA	-2	True	AATAAA	-13	NA	137570349	137572580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
Isoform_122345_1613	chr3	+	964	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	103	2	-1	-2	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGTGGTACTTTTGTT	NA	False	NA	30	True	ATTAAA	-19	NA	137570350	137572681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
Isoform_122370_20	chr3	+	1396	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	104	7977	104	-349	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGGACTGTTAATGAC	NA	False	NA	14	True	ATTAAA	-27	NA	137573539	137614341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
Isoform_122374_5	chr3	+	1460	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	32	7985	32	-357	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGAAATCTTGGACTG	NA	False	NA	6	True	ATTAAA	-19	NA	137573467	137614333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
Isoform_122375_4	chr3	+	7471	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	97	1909	97	-1909	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137573532	137620409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
Isoform_122376_8	chr3	+	1258	7	FSM	ENSMUSG00000091512.6	ENSMUST00000197064.5	733	7	21	-546	1	0	multi-exon	FALSE	canonical	2	2	junction_1	115.993773779266	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	81	False	NA	2	True	AATAAA	-22	NA	137624287	137634526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137624389_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
Isoform_122378_195	chr3	+	1312	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	-20	3	0	-3	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAATGAGCTCTGTATAGG	60	False	NA	-1	True	AATAAA	-19	NA	137624266	137634523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
Isoform_122379_205	chr3	+	1278	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	17	0	17	0	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	97	False	NA	2	True	AATAAA	-22	NA	137624303	137634526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
Isoform_122383_60	chr3	+	2438	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	42	1545	21	-1542	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTCTAAAATTCAGGTT	NA	False	NA	3	True	AATAAA	-18	NA	137849250	137864037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
Isoform_122386_7	chr3	+	3998	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	25	2	4	1	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGTCAGCTAATGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	137849233	137865580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
Isoform_122387_12	chr3	+	1315	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	3	2707	3	1296	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGATCGTTTGGTTTT	NA	False	NA	NA	False	AATGAA	-20	NA	137849211	137862875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
Isoform_122390_6	chr3	+	4871	8	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-6	-1541	intron_retention	FALSE	canonical	3	7	junction_1	62.9051764522587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	4	True	AATAAA	-19	NA	137849615	137864038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
Isoform_122392_21	chr3	+	1330	9	FSM	ENSMUSG00000074207.11	ENSMUST00000004232.10	1492	9	157	5	0	-5	multi-exon	FALSE	canonical	3	10	junction_3	3.01817411691241	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTGAGTTTTCTGTGA	NA	False	NA	NA	False	AATAAA	-23	NA	137983411	137996454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_137983498_137985491_137985594_137986134_137986274_137988196_137988285_137988375_137988596_137992452_137992714_137994509_137994646_137995562_137995702_137996295
Isoform_122394_3146	chr3	+	1404	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	17	183	-1	73	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	3146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4941	False	NA	17	True	AATAAA	-14	NA	138148870	138161077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
Isoform_122417_94	chr3	+	2353	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	861	-1793	1	978	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCATTGCTCTTATTAT	NA	False	NA	22	True	TATAAA	-15	NA	138233046	138262953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
Isoform_122420_52	chr3	+	2761	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	861	-2201	1	1386	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTGAGTAGGATGTA	NA	False	NA	NA	False	CATAAA	-19	NA	138233046	138263361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
Isoform_122421_171	chr3	+	2072	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	861	-1512	1	697	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGGTCAATTGTTGCA	NA	False	NA	14	True	AATAAA	-29	NA	138233046	138262672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
Isoform_122424_719	chr3	+	1620	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	861	-1060	1	245	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTAGATTTGTCCTTTAT	NA	False	NA	26	True	AATAAA	-27	NA	138233046	138262220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
Isoform_122426_40	chr3	+	2381	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	837	-1797	-23	982	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGCTCTTATTATGTAC	NA	False	NA	26	True	TATAAA	-19	NA	138233022	138262957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
Isoform_122453_191	chr3	+	3109	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	64	3480	-46	-1	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGATCACGTCGTCTT	4889	False	NA	18	True	AATAAA	-31	NA	138448019	138610186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
Isoform_122454_12	chr3	+	2407	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	19	4227	19	4	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGTGCTCGCTGAG	4844	False	NA	NA	False	AATAAA	-16	NA	138447974	138609439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
Isoform_122461_129	chr3	+	3055	8	FSM	ENSMUSG00000028152.11	ENSMUST00000142890.8	3000	8	-55	0	-55	0	multi-exon	FALSE	canonical	3	60	junction_4	43.0926860596637	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	4880	False	NA	19	True	AATAAA	-32	NA	138448010	138610187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
Isoform_122462_22	chr3	+	3088	8	FSM	ENSMUSG00000028152.11	ENSMUST00000142890.8	3000	8	-88	0	22	0	multi-exon	FALSE	canonical	3	60	junction_4	43.0926860596637	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	4847	False	NA	19	True	AATAAA	-32	NA	138447977	138610187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
Isoform_122467_15	chr3	+	2250	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	23	-385	-6	385	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAACTGTCTTCTGGCTC	NA	False	NA	NA	False	AGTAAA	-19	NA	142406834	142450673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_122468_27	chr3	+	1905	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	-13	-4	-13	4	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCATCTGCAGCTCGTC	NA	False	NA	NA	False	NA	NA	NA	142406798	142450292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_122469_79	chr3	+	1697	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	1	190	1	1	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCCGTGTTGTACTTT	NA	False	NA	22	True	AATACA	-36	NA	142406812	142450098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_122471_14	chr3	+	1701	14	FSM	ENSMUSG00000040213.14	ENSMUST00000044392.11	4206	14	-28	2533	1	1	multi-exon	FALSE	canonical	3	21	junction_2	23.3184793520062	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCCGTGTTGTACTTT	NA	False	NA	22	True	AATACA	-36	NA	142406812	142450098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_122472_8	chr3	+	1884	14	FSM	ENSMUSG00000040213.14	ENSMUST00000044392.11	4206	14	-20	2342	9	1	multi-exon	FALSE	canonical	3	21	junction_2	23.3184793520062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACCTCATCTGCAGCTC	NA	False	NA	NA	False	NA	NA	NA	142406820	142450289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_122474_6	chr3	+	1605	13	NIC	ENSMUSG00000040213.14	novel	1888	14	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	27.8910330074421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGTTGTACTTTCTC	NA	False	NA	25	True	AATACA	-39	NA	142406804	142450101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_142406937_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_122475_229	chr3	+	1266	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	181	8	3	-8	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAGTTTTTGTTATA	NA	False	NA	0	True	AATAAA	-7	NA	142470986	142489359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
Isoform_122476_42	chr3	+	1328	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	124	3	-54	-3	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTTGTTATAGTATT	NA	False	NA	5	True	AATAAA	-12	NA	142470929	142489364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
Isoform_122479_1781	chr3	+	1221	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	288	5	0	-5	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGTCTGCTTTGTCCTT	NA	False	NA	23	True	AATAAA	-25	NA	144276474	144303436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
Isoform_122480_90	chr3	+	1490	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	19	5	19	-5	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGTCTGCTTTGTCCTT	NA	False	NA	23	True	AATAAA	-25	NA	144276205	144303436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
Isoform_122485_16	chr3	+	2416	16	FSM	ENSMUSG00000028256.17	ENSMUST00000106192.9	2425	16	-18	27	-17	-1	multi-exon	FALSE	canonical	3	28	junction_1	23.1944437791084	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAATAACAGTATAAGT	NA	False	NA	NA	False	AATAAA	-16	NA	144824331	144859649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
Isoform_122486_12	chr3	+	2291	15	FSM	ENSMUSG00000028256.17	ENSMUST00000029920.15	2239	15	-53	1	-21	-1	multi-exon	FALSE	canonical	3	28	junction_1	27.9021614260419	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAATAACAGTATAAGT	NA	False	NA	NA	False	AATAAA	-16	NA	144824327	144859649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
Isoform_122487_4	chr3	+	2638	16	NIC	ENSMUSG00000028256.17	novel	913	7	NA	NA	-43	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	28.4320632776136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAGTATAAGTTTTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	144824691	144859655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_144825120_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
Isoform_122492_78	chr3	+	1127	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	1	-1	1	1	multi-exon	TRUE	canonical	3	509	junction_1	98.0487633782293	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	NA	False	NA	50	True	ATTAAA	-24	NA	145281960	145309869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_122493_271	chr3	+	1096	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	32	-1	5	1	multi-exon	FALSE	canonical	3	509	junction_1	98.0487633782293	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	NA	False	NA	50	True	ATTAAA	-24	NA	145281991	145309869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_122494_11	chr3	+	1163	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	25	-61	-2	61	multi-exon	FALSE	canonical	3	509	junction_1	98.0487633782293	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCCTGGTTCACCCGA	NA	False	NA	110	True	TATAAA	-19	NA	145281984	145309929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_122496_10	chr3	+	1700	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	20	-593	-7	-89	multi-exon	FALSE	canonical	3	509	junction_1	98.0487633782293	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTGTGCTTTCCTCT	NA	False	NA	NA	False	TATAAA	-18	NA	145281979	145310461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_122499_23	chr3	+	1221	11	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	227.48013100049	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	NA	False	NA	50	True	ATTAAA	-24	NA	145281991	145309869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_145282174_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_122501_116	chr3	+	1651	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	5	683	5	-1	multi-exon	FALSE	canonical	3	657	junction_9	57.8243402122986	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGTGCATGTTACTGC	NA	False	NA	48	True	ATTAAA	-22	NA	145281991	145309867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_122503_6	chr3	+	1699	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	5	635	5	47	multi-exon	FALSE	canonical	3	657	junction_9	57.8243402122986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTCCATAGGATGAGCT	NA	False	NA	96	True	TATAAA	-5	NA	145281991	145309915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_122506_267	chr3	+	3712	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	52	0	52	0	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTAGTGTCTGTCTCGT	NA	False	NA	9	True	AATAAA	-18	NA	145464481	145600032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
Isoform_122507_334	chr3	+	2702	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	52	1010	52	1	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGGTTGCCTTTGGGGG	NA	False	NA	14	True	AATAAA	-19	NA	145464481	145599022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
Isoform_122511_10	chr3	+	2808	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	-54	1010	-54	1	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGGTTGCCTTTGGGGG	NA	False	NA	14	True	AATAAA	-19	NA	145464375	145599022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
Isoform_122526_26	chr3	+	1938	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	32	-21	32	21	multi-exon	FALSE	canonical	3	334	junction_2	11.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTGGTTGTACATGTG	NA	False	NA	108	True	AATATA	-30	NA	145630048	145640132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145630271_145636160_145636450_145638705
Isoform_122527_603	chr3	+	1853	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	24	72	24	-72	multi-exon	FALSE	canonical	3	334	junction_2	11.5	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGTGTCTGAGTCAGAA	NA	False	NA	15	True	NA	NA	NA	145630040	145640039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145630271_145636160_145636450_145638705
Isoform_122528_36	chr3	+	1894	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	-17	72	-17	-72	multi-exon	FALSE	canonical	3	334	junction_2	11.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGTGTCTGAGTCAGAA	NA	False	NA	15	True	NA	NA	NA	145629999	145640039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145630271_145636160_145636450_145638705
Isoform_122531_8	chr3	+	1690	4	FSM	ENSMUSG00000036873.14	ENSMUST00000152783.2	514	4	-155	-1021	-7	2	multi-exon	FALSE	canonical	3	74	junction_3	20.0388511535855	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAGCATCTTGTTTAT	NA	False	NA	7	True	ATTAAA	-21	NA	145643789	145650586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649516
Isoform_122532_21	chr3	+	1120	4	FSM	ENSMUSG00000036873.14	ENSMUST00000152783.2	514	4	-140	-466	8	34	multi-exon	FALSE	canonical	3	74	junction_3	20.0388511535855	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTATTACTGAATGC	NA	False	NA	24	True	AATAAA	-14	NA	145643804	145650031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649516
Isoform_122533_27	chr3	+	1639	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	8	-3	8	1	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTAGCATCTTGTTTA	NA	False	NA	6	True	ATTAAA	-20	NA	145643804	145650585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
Isoform_122534_89	chr3	+	1085	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	8	551	8	34	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTATTACTGAATGC	NA	False	NA	24	True	AATAAA	-14	NA	145643804	145650031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
Isoform_122535_48	chr3	+	1009	3	FSM	ENSMUSG00000036873.14	ENSMUST00000190472.2	724	3	-251	-34	-8	34	multi-exon	FALSE	canonical	3	74	junction_2	94.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTATTACTGAATGC	NA	False	NA	24	True	AATAAA	-14	NA	145643788	145650031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145644084_145644652_145644852_145649516
Isoform_122536_22	chr3	+	1558	3	FSM	ENSMUSG00000036873.14	ENSMUST00000190472.2	724	3	-250	-584	-7	-1	multi-exon	FALSE	canonical	3	74	junction_2	94.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAACTTAGCATCTTG	NA	False	NA	2	True	ATTAAA	-16	NA	145643789	145650581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145644084_145644652_145644852_145649516
Isoform_122538_173	chr3	+	976	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	18	553	-10	34	multi-exon	FALSE	canonical	3	242	junction_2	10.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTATTACTGAATGC	NA	False	NA	24	True	AATAAA	-14	NA	145643786	145650031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145644084_145644652_145644852_145649551
Isoform_122540_78	chr3	+	1528	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	18	1	-10	1	multi-exon	FALSE	canonical	3	242	junction_2	10.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTTAGCATCTTGTT	NA	False	NA	4	True	ATTAAA	-18	NA	145643786	145650583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145644084_145644652_145644852_145649551
Isoform_122542_21	chr3	+	5553	7	FSM	ENSMUSG00000036863.13	ENSMUST00000212479.2	3810	7	-323	-1420	-56	-1	multi-exon	FALSE	canonical	3	37	junction_1	19.8445346520284	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCTATTGTAATTGATT	NA	False	NA	4	True	ATTAAA	-15	NA	145693568	145727474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145694925_145704217_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
Isoform_122544_11	chr3	+	5615	7	FSM	ENSMUSG00000036863.13	ENSMUST00000212479.2	3810	7	-385	-1420	-118	-1	multi-exon	FALSE	canonical	3	37	junction_1	19.8445346520284	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCTATTGTAATTGATT	NA	False	NA	4	True	ATTAAA	-15	NA	145693506	145727474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145694925_145704217_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
Isoform_122547_45	chr3	+	5612	7	FSM	ENSMUSG00000036863.13	ENSMUST00000039517.11	5495	7	-118	1	-118	-1	multi-exon	FALSE	canonical	3	28	junction_1	22.9685775692696	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCTATTGTAATTGATT	NA	False	NA	4	True	ATTAAA	-15	NA	145693506	145727474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
Isoform_12255_2357	chr11	-	1158	10	FSM	ENSMUSG00000057113.14	ENSMUST00000109354.10	1157	10	0	-1	0	1	multi-exon	FALSE	canonical	3	2877	junction_1	5620.63509877489	2357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGATGTATGTGACAAT	NA	False	NA	-21	True	AATAAA	-16	NA	33113077	33104925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
Isoform_122552_3	chr3	+	3031	13	NIC	ENSMUSG00000036853.6	novel	2991	12	NA	NA	27	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.08166599946613	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGGAAGACTCTTGACA	NA	False	NA	NA	False	NA	NA	NA	145823231	145847562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_145823390_145827545_145827776_145830499_145830668_145833857_145834012_145834637_145834723_145834850_145834948_145836901_145837002_145839404_145839518_145839594_145839745_145843012_145843115_145843201_145843325_145845125_145845333_145846218
Isoform_122553_3	chr3	+	2827	13	NIC	ENSMUSG00000036853.6	novel	2991	12	NA	NA	27	-203	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.08166599946613	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCCTTAATGTTATTC	NA	False	NA	NA	False	CATAAA	-25	NA	145823231	145847358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_145823390_145827545_145827776_145830499_145830668_145833857_145834012_145834637_145834723_145834850_145834948_145836901_145837002_145839404_145839518_145839594_145839745_145843012_145843115_145843201_145843325_145845125_145845333_145846218
Isoform_122555_7	chr3	+	3542	15	NIC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	66.5729613557446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGAAGCCTTGTGTTGT	NA	False	NA	14	True	ATTAAA	-16	NA	146110396	146145891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_146110540_146120450_146120555_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
Isoform_122557_215	chr3	+	3436	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	1	9	1	2	multi-exon	FALSE	canonical	3	150	junction_1	20.2423190195674	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	NA	False	NA	13	True	ATTAAA	-15	NA	146110397	146145890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
Isoform_122562_99	chr3	+	3391	14	FSM	ENSMUSG00000036825.13	ENSMUST00000039021.11	3410	14	22	-3	0	3	multi-exon	FALSE	canonical	3	67	junction_10	37.3226774028969	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGAAGCCTTGTGTTGT	NA	False	NA	14	True	ATTAAA	-16	NA	146110440	146145891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
Isoform_122566_5	chr3	+	3697	15	NIC	ENSMUSG00000036825.13	novel	2416	15	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	66.9228919682029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGAAGCCTTGTGTTGT	NA	False	NA	14	True	ATTAAA	-16	NA	146110392	146145891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_146110691_146120450_146120555_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
Isoform_122568_26	chr3	+	3562	14	NIC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	45.0928037135147	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	NA	False	NA	13	True	ATTAAA	-15	NA	146110422	146145890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_146110691_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
Isoform_122570_15	chr3	+	3585	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106151.8	3232	14	1	-354	1	3	multi-exon	FALSE	canonical	3	35	junction_1	53.8853703345785	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGAAGCCTTGTGTTGT	NA	False	NA	14	True	ATTAAA	-16	NA	146110397	146145891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_146110691_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
Isoform_122571_8	chr3	+	2881	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	5	6	-3	-6	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACACAGTGACTTATT	5959	False	NA	NA	False	AATAAA	-9	NA	146156229	146171598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
Isoform_122572_8	chr3	+	2108	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	5	779	-3	-701	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTTCTTGTTTCCTT	5959	False	NA	NA	False	AATAAA	-11	NA	146156229	146170825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
Isoform_122574_4	chr3	+	2743	6	NIC	ENSMUSG00000028189.13	novel	2892	7	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	10.6320270880016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACACAGTGACTTATTT	5959	False	NA	NA	False	AATAAA	-10	NA	146156229	146171599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_146156386_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
Isoform_122576_1371	chr3	+	495	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	70	28	-13	-3	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGCCTCCTTACTG	NA	False	NA	-2	True	AATAAA	-11	NA	146205631	146211299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_146205776_146209014_146209155_146211088
Isoform_122577_539	chr3	+	519	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	46	28	-37	-3	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGCCTCCTTACTG	NA	False	NA	-2	True	AATAAA	-11	NA	146205607	146211299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_146205776_146209014_146209155_146211088
Isoform_122585_38	chr3	+	2475	21	NIC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	463.709486100942	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916117	151938408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_122588_25	chr3	+	2464	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	466.001960832784	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916117	151938409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
Isoform_122590_43	chr3	+	2472	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	449.059002248034	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916117	151938408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_122594_220	chr3	+	2403	20	NIC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	332.523108563197	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916117	151938408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
Isoform_122595_26	chr3	+	2656	20	NIC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	-1	235	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	332.523108563197	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGATCTTTAGTATACTT	NA	False	NA	20	True	ATTAAA	-16	NA	151916117	151938661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
Isoform_122602_296	chr3	+	2413	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	-38	-1	-1	0	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916117	151938409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_122603_28	chr3	+	2665	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	-38	-253	-1	235	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGATCTTTAGTATACTT	NA	False	NA	20	True	ATTAAA	-16	NA	151916117	151938661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_122605_61	chr3	+	2435	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	-60	-1	-14	0	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916095	151938409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_122617_347	chr3	+	2400	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916117	151938408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
Isoform_122620_31	chr3	+	2656	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	238	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTTAGTATACTTCCA	NA	False	NA	23	True	ATTAAA	-19	NA	151916117	151938664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
Isoform_122624_25	chr3	+	2550	20	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	74	junction_19	373.246081183867	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916117	151938409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
Isoform_122626_461	chr3	+	2409	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	59	4055	-1	0	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916117	151938408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_122633_42	chr3	+	6468	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	59	-4	-1	4	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGTGTCTTTTAA	NA	False	NA	15	True	AATAAA	-20	NA	151916117	151942467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_122659_504	chr3	+	3874	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	26	283	0	1	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGAATGTTGAATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	152052151	152098971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
Isoform_122667_497	chr3	+	3847	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	40	-1	3	1	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGAATGTTGAATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	152052154	152098971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
Isoform_122671_13	chr3	+	4979	23	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	-6	0	intron_retention	FALSE	canonical	3	273	junction_12	62.2008377345196	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052142	152098970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
Isoform_122684_11	chr3	+	4316	15	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	16	junction_4	74.0165797752953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152101640	152165112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122687_197	chr3	+	4264	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-7	3350	-7	-1	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152101632	152165113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122688_31	chr3	+	7614	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-7	0	-7	0	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTCCATTTATTTC	NA	False	NA	13	True	AATAAA	-15	NA	152101632	152168463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122689_13	chr3	+	4241	14	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_6	52.5803977243618	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAAGCTTGTTGTGGAT	NA	False	NA	17	True	AATAAA	-26	NA	152101650	152165111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122691_5	chr3	+	2772	14	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	77.7324344205606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGTTGTGGATTCCTT	NA	False	NA	22	True	AATAAA	-31	NA	152101632	152165116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122693_16	chr3	+	4112	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	61.537420864598	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152101631	152165114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_152101776_152125651_152125778_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122697_113	chr3	+	4192	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	-4	3351	-4	1	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152102326	152165112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122698_13	chr3	+	4500	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	-312	3351	250	1	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152102018	152165112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122699_10	chr3	+	7538	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTTCCATTTATTT	NA	False	NA	12	True	AATAAA	-14	NA	152102330	152168462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122701_12	chr3	+	4198	14	FSM	ENSMUSG00000039068.17	ENSMUST00000089982.11	4197	14	-4	3	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	76.161382688458	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAAGCTTGTTGTGGAT	NA	False	NA	17	True	AATAAA	-26	NA	152102316	152165111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_122703_270	chr3	+	1546	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	14	3177	1	1	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTTTGTGTGTGCTGTCT	3971	False	NA	34	True	AGTAAA	-38	NA	152419750	152491486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
Isoform_122706_5	chr3	+	1629	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	9	3099	3	5	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTTTACAATGCATT	3966	False	NA	112	True	NA	NA	NA	152419745	152491564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
Isoform_122707_310	chr3	+	2050	9	FSM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	456	-1	23	1	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTTGTCTGTCTCGTGT	NA	False	NA	17	True	AGTAAA	-17	NA	154302803	154328818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
Isoform_122709_4	chr3	+	2530	9	FSM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	-26	1	-26	-1	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCCTTGTCTGTCTCGT	NA	False	NA	15	True	AGTAAA	-15	NA	154302321	154328816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
Isoform_122713_8	chr3	+	2136	9	NIC	ENSMUSG00000028199.19	novel	2507	9	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	62.745019722684	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTTGTCTGTCTCGTGT	NA	False	NA	17	True	AGTAAA	-17	NA	154302817	154328818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_154302922_154310528_154310753_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
Isoform_122714_5	chr3	+	2275	9	NIC	ENSMUSG00000028199.19	novel	2505	9	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	57.5769865050265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCCTTGTCTGTCTCGT	NA	False	NA	15	True	AGTAAA	-15	NA	154302819	154328816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_154303165_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
Isoform_122715_6	chr3	+	2232	9	NIC	ENSMUSG00000028199.19	novel	2505	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	57.5769865050265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTGTCTGTCTCGTG	NA	False	NA	16	True	AGTAAA	-16	NA	154302863	154328817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_154303165_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
Isoform_122721_17	chr3	+	7242	7	ISM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-17	-4	-5	4	intron_retention	FALSE	canonical	3	775	junction_5	69.3511595673305	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGACTGAATGTTCTAA	NA	False	NA	7	True	AATAAA	-15	NA	157240007	157254017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336
Isoform_122727_83	chr3	+	2717	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-17	37	-5	3	multi-exon	FALSE	canonical	3	77	junction_9	297.644569915193	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTGTTGTTTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	157240007	157253976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
Isoform_122730_142	chr3	+	2662	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	238	24	10	10	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATGTTCTAAACTCAT	NA	False	NA	13	True	AATAAA	-21	NA	157240034	157254023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
Isoform_122732_668	chr3	+	2642	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	211	71	-5	3	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTGTTGTTTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	157240007	157253976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
Isoform_122734_190	chr3	+	2865	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-10	69	-10	5	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGTTGTTTATTAGAA	NA	False	NA	16	True	AATAAA	-17	NA	157239786	157253978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
Isoform_122738_45	chr3	+	2921	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-20	23	-20	11	multi-exon	TRUE	canonical	3	697	junction_8	81.8057017542553	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATGTTCTAAACTCATA	NA	False	NA	14	True	AATAAA	-22	NA	157239776	157254024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
Isoform_122749_350	chr3	+	4085	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-182	0	-7	0	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	False	NA	15	True	AATAAA	-23	NA	157652868	157713671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
Isoform_122752_143	chr3	+	4334	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-438	7	-263	-7	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTCATGATGTGCCTA	NA	False	NA	8	True	AATAAA	-16	NA	157652612	157713664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
Isoform_122765_10	chr3	+	4032	12	FSM	ENSMUSG00000039988.15	ENSMUST00000199727.5	3426	12	-7	-599	-7	-7	multi-exon	FALSE	canonical	3	11	junction_4	98.369517552294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTCATGATGTGCCTA	NA	False	NA	8	True	AATAAA	-16	NA	157652868	157713664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
Isoform_122776_1307	chr3	+	2703	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	42	1397	2	1	multi-exon	TRUE	canonical	3	641	junction_2	81.4479926714224	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	30	True	AATAAA	-45	NA	157742340	157772727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
Isoform_12278_9	chr11	-	1572	3	FSM	ENSMUSG00000040610.8	ENSMUST00000037746.8	1533	3	-37	-2	-37	2	multi-exon	FALSE	canonical	3	12	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGCTTTTATTTCGTT	9453	False	NA	NA	False	AATAAA	-19	NA	33153626	33150749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_33151490_33152428_33152673_33153038
Isoform_122780_65	chr3	+	4092	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	42	8	2	-8	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCAGTCTGTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	157742340	157774116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
Isoform_122788_236	chr3	+	2629	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	146	junction_2	190.962278254048	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	30	True	AATAAA	-45	NA	157742340	157772727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
Isoform_12279_4	chr11	-	2513	2	NIC	ENSMUSG00000040610.8	novel	1533	3	NA	NA	-37	4	intron_retention	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCTTTTATTTCGTTTT	9453	False	NA	NA	False	AATAAA	-21	NA	33153626	33150747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_33152673_33153038
Isoform_122798_66	chr3	+	2447	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	4	-1	2	1	multi-exon	FALSE	canonical	3	70	junction_1	215.046296694973	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	30	True	AATAAA	-45	NA	157742340	157772727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
Isoform_12280_26	chr11	-	3664	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-19	-1416	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCACATGTTTCAAGT	NA	False	NA	-6	True	TATAAA	-41	NA	33463765	33163210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_122804_3	chr3	+	770	4	ISM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	-12	13729	-5	-13729	5prime_fragment	FALSE	canonical	3	57	junction_3	8.5764535535124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTAAATATGCATT	NA	False	NA	NA	False	AATAAA	-19	NA	159201082	159221367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141
Isoform_122805_3	chr3	+	2549	8	ISM	ENSMUSG00000028175.16	ENSMUST00000029825.14	2920	12	-4	5487	-4	-5370	intron_retention	FALSE	canonical	3	39	junction_7	11.423213029545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAATGTTGCCCATATGT	NA	False	NA	NA	False	NA	NA	NA	159201083	159229726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162
Isoform_122806_3	chr3	+	2125	9	ISM	ENSMUSG00000028175.16	ENSMUST00000029825.14	2920	12	-2	5489	-2	-5372	5prime_fragment	FALSE	canonical	3	38	junction_8	13.5686909832894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTAATGTTGCCCATAT	NA	False	NA	NA	False	NA	NA	NA	159201085	159229724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413
Isoform_122807_73	chr3	+	3307	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	14	2	-4	-2	multi-exon	FALSE	canonical	3	37	junction_11	13.4778667659976	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTATTTTTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	159201083	159235590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
Isoform_122810_19	chr3	+	2464	11	FSM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	2	-495	2	-1	multi-exon	FALSE	canonical	3	16	junction_7	17.3262806164508	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTATTTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-19	NA	159201096	159235591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
Isoform_122812_23	chr3	+	2589	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	24	946	24	174	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTGCTTAAAATGTGT	NA	False	NA	19	True	ATTAAA	-30	NA	159545332	159640713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
Isoform_122813_9	chr3	+	2672	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	39	848	-26	272	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCCTGTCCCAACAGT	NA	False	NA	117	True	AATAAA	-18	NA	159545347	159640811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
Isoform_122814_3	chr3	+	3492	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	66	1	1	-1	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAATGGAGTGAGGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	159545374	159641658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
Isoform_122815_11	chr3	+	2082	13	FSM	ENSMUSG00000028173.11	ENSMUST00000198878.2	2050	13	-31	-1	-31	1	multi-exon	FALSE	canonical	3	12	junction_12	7.78888096369861	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTATTTCCGTTTATT	NA	False	NA	NA	False	NA	NA	NA	159545342	159644301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
Isoform_122816_538	chr3	+	2226	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2124	1	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	538	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116655339	116697128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
Isoform_122817_15	chr3	+	2390	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2124	165	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGCCTCTGTTTCC	NA	False	NA	7	True	NA	NA	NA	116655339	116697292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
Isoform_122820_10	chr3	+	2660	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2122	433	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAACTAAACACGT	NA	False	NA	NA	False	AGTAAA	-8	NA	116655337	116697560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
Isoform_122822_19	chr3	+	2812	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	1538	1	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116654753	116697128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
Isoform_12283_9	chr11	-	5080	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-25	-6	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACGCTGTGGGCTCCC	NA	False	NA	NA	False	ATTAAA	-13	NA	33463771	33161800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_122830_44	chr3	+	2155	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2106	1	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	74.6183176795975	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116655321	116697128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
Isoform_122836_3	chr3	+	4383	16	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-574	-6833	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	14.0117411084022	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTTATGAGTTATC	NA	False	NA	NA	False	ATTAAA	-12	NA	32451245	32510144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527
Isoform_122838_10	chr3	+	4622	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-576	944	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATCATTAATATATATT	NA	False	NA	NA	False	ATTAAA	-41	NA	32451243	32517921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
Isoform_122841_6	chr3	+	4674	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-632	940	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAACTATCATTAATATA	NA	False	NA	NA	False	ATTAAA	-37	NA	32451187	32517917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
Isoform_122846_12	chr3	+	4543	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-497	944	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATCATTAATATATATT	NA	False	NA	NA	False	ATTAAA	-41	NA	32451322	32517921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
Isoform_12285_5	chr11	-	4985	28	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-25	-10	combination_of_known_splicesites	FALSE	canonical	3	41	junction_15	49.7087263565917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAACGCTGTGGGC	NA	False	NA	NA	False	ATTAAA	-9	NA	33463771	33161804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
Isoform_122850_8	chr3	+	6854	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-473	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGTTCTTATTAATCAG	NA	False	NA	95	True	CATAAA	-15	NA	32451346	32520256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
Isoform_122853_5	chr3	+	3335	6	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	42104	385	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	81.3324043662795	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAATCTTGGGTCTGGT	7708	False	NA	8	True	AATATA	-9	NA	88724626	88733279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
Isoform_122859_39	chr3	+	7575	33	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	85.5676758387038	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742542	88817406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88783213_88783238_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
Isoform_122860_3	chr3	+	6029	25	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	3	1891	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	99.8780419506154	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTGTGTTAATTA	NA	False	NA	13	True	NA	NA	NA	88742563	88809697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884
Isoform_122861_17	chr3	+	7567	32	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	88.6012944942465	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742526	88817406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
Isoform_122864_12	chr3	+	4260	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-17	1	intron_retention	FALSE	canonical	3	13	junction_1	88.4969214378091	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	8601	False	NA	14	True	ATTAAA	-16	NA	88522656	88555358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_122867_27	chr3	+	4266	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-17	1	intron_retention	FALSE	canonical	3	13	junction_1	80.4191759242328	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	8601	False	NA	14	True	ATTAAA	-16	NA	88522656	88555358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_122870_49	chr3	+	2426	16	NNC	ENSMUSG00000028256.17	novel	2425	16	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	18.7538440503985	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAGTATAAGTTTTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	144824331	144859655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
Isoform_122871_15	chr3	+	2250	15	NNC	ENSMUSG00000028256.17	novel	2239	15	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	24.2331363624105	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAGTATAAGTTTTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	144824378	144859655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
Isoform_122872_10	chr3	+	2602	2	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-342	-3	intron_retention	FALSE	canonical	3	46	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATCCAGTGTCTTCC	NA	False	NA	5	True	AGTAAA	-19	NA	95334639	95338395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_95334711_95335864
Isoform_122873_11	chr3	+	4690	24	Fusion	ENSMUSG00000097532.3_ENSMUSG00000015522.19	novel	2825	18	NA	NA	-344	1	multi-exon	TRUE	canonical	0	0	junction_13	94.5688055291281	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTTGTGTTGTGTGA	NA	False	NA	NA	False	TTTAAA	-23	NA	95334637	95404549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_+_95334711_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
Isoform_122875_9	chr3	+	898	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-343	1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	52.0917993119412	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCAGTGTCTTCCTCTA	NA	False	NA	9	True	AGTAAA	-23	NA	95334638	95338399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_95334711_95335864_95336134_95337597_95337750_95337994
Isoform_122876_24	chr3	+	3922	23	NNC	ENSMUSG00000039234.12	novel	3649	20	NA	NA	-2656	-1	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	16.1403964230813	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGCTTACTGTGTTTT	NA	False	NA	12	True	AATAAA	-12	NA	123058447	123159284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_123058555_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
Isoform_122878_18	chr3	+	5867	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2656	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	15.8213084042354	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTACTGTGTTTTA	NA	False	NA	13	True	AATAAA	-13	NA	123058447	123159285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_123058555_123059241_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
Isoform_12288_76	chr11	-	3601	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-16	1416	-16	-1416	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCACATGTTTCAAGT	NA	False	NA	-6	True	TATAAA	-41	NA	33463762	33163210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_122883_38	chr3	+	2543	3	Intergenic	novelGene_6939	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	25209617	25216407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_25209891_25214092_25214923_25214967
Isoform_122884_4	chr3	+	4992	24	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-477	-1073	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	5.92198811964571	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTAGTGCTGTTTGC	NA	False	NA	NA	False	AGTAAA	-16	NA	86131509	86258228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553
Isoform_122885_3	chr3	+	6515	34	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-471	24406	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	5.67888813339272	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGCTAATTATTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	86131515	86283707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211
Isoform_122886_10	chr3	+	10065	57	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-452	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	6.58846297612388	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAGTGGAAACTGA	NA	False	NA	7	True	AATAAA	-15	NA	86131534	86689992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
Isoform_12289_12	chr11	-	4992	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	1	8	1	-8	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAACGCTGTGGGCTC	NA	False	NA	NA	False	ATTAAA	-11	NA	33463745	33161802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_122890_7	chr3	+	8008	33	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	88.7011969690939	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCGTTTTCTTCA	NA	False	NA	13	True	AGTAAA	-17	NA	88742564	88817408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88743050_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88783213_88783238_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
Isoform_122892_14	chr3	+	2832	5	NNC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	-1505	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	170.332579091611	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGTTTCAGAGTAATCA	158	False	NA	22	True	AATAAA	-12	NA	95138092	95143721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_95138253_95139095_95139404_95139859_95139971_95140798_95140891_95141560
Isoform_122894_14	chr3	+	2068	11	NNC	ENSMUSG00000015714.12	novel	1524	6	NA	NA	147	-11	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	136.729989395158	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTTGAGAAAGGGTT	4648	False	NA	34	True	AATAAA	-20	NA	95222724	95230899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_95222850_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_122896_11	chr3	+	781	3	NNC	ENSMUSG00000027703.17	novel	2387	8	NA	NA	10839	1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	6.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTGTGGGAAGAATGA	NA	False	NA	6	True	NA	NA	NA	30712873	30726581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_30713166_30714049_30714247_30726289
Isoform_122900_12	chr3	+	1118	2	Intergenic	novelGene_6971	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34818272	34820313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_34818433_34819355
Isoform_122905_4	chr3	+	3994	10	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	155	-6	intron_retention	FALSE	canonical	3	15	junction_1	44.342104395509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTACAGATGAGATTCT	6895	False	NA	16	True	NA	NA	NA	88050035	88077231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_88050807_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
Isoform_122906_3	chr3	+	2299	3	NNC	ENSMUSG00000028053.14	novel	11268	27	NA	NA	116	-45505	intron_retention	FALSE	canonical	1	2	junction_1	1.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGCCAAGTTTGACT	NA	False	NA	NA	False	AATACA	-35	NA	88858044	88890070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_88858296_88873118_88873636_88888539
Isoform_122912_6	chr3	+	1851	9	Fusion	ENSMUSG00000056411.3_ENSMUSG00000009108.16	novel	2518	7	NA	NA	812	0	multi-exon	FALSE	canonical	2	2	junction_7	1.61535599791501	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTGGGTTCCCTGTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	107994103	108008746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_+_107994208_108000509_108000683_108002456_108002500_108002754_108002897_108003665_108003824_108005282_108005412_108005626_108005757_108007303_108007458_108007928
Isoform_122913_3	chr3	+	1757	9	Fusion	ENSMUSG00000056411.3_ENSMUSG00000009108.16	novel	2518	7	NA	NA	767	0	multi-exon	FALSE	canonical	2	2	junction_7	1.61535599791501	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGTTTTACTGGTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	107994058	108008607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr3_+_107994208_108000509_108000683_108002456_108002500_108002754_108002897_108003665_108003824_108005282_108005412_108005626_108005757_108007303_108007458_108007928
Isoform_122916_9	chr3	+	5045	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	-515	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	62.5397651276548	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103009404	103077047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_103009573_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
Isoform_122918_8	chr3	+	5138	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	83	1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	64.7229613691699	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCCCACAGATCTC	NA	False	NA	NA	False	GATAAA	-10	NA	103010058	103077048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_103010319_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
Isoform_122919_6	chr3	+	3152	12	NNC	ENSMUSG00000028164.16	novel	535	4	NA	NA	268	-72	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	47.973132976733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCACTGACAACTTGAA	NA	False	NA	12	True	NA	NA	NA	135228963	135277093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_135229432_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
Isoform_122926_4	chr3	+	776	4	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-762	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	161.470327511486	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGATGCTTATTTATT	NA	False	NA	9	True	AATAAA	-14	NA	90420979	90431882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_90421081_90422067_90422327_90423156_90423350_90431659
Isoform_122930_3	chr3	+	2400	9	NNC	ENSMUSG00000038298.15	novel	531	2	NA	NA	-9	-7	intron_retention	FALSE	canonical	1	1	junction_1	8.68907359849138	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTATTTGGTAAAATCT	NA	False	NA	NA	False	AATAAA	-15	NA	96740532	96778235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_96740615_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
Isoform_122932_3	chr3	+	1393	2	NNC	ENSMUSG00000028023.17	novel	1942	5	NA	NA	3318	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTCTGGATTCTTTC	NA	False	NA	NA	False	AGTAAA	-14	NA	129011241	129013237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_129011380_129011982
Isoform_122939_19	chr3	+	177	1	Intergenic	novelGene_7024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	63684000	63684177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_63684000_63684200
Isoform_12295_18	chr11	-	3505	27	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-6	-1411	combination_of_known_splicesites	FALSE	canonical	3	45	junction_25	39.8224610285058	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTTTCAAGTCTATC	NA	False	NA	-1	True	NA	NA	NA	33463752	33163205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
Isoform_122959_5	chr3	-	768	1	FSM	ENSMUSG00000074580.12	ENSMUST00000193051.2	1725	1	960	-3	-69	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGGGATC	NA	False	NA	NA	False	ATTAAA	-17	NA	65435674	65434906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_65434900_65435700
Isoform_122960_4	chr3	+	4610	1	NIC	ENSMUSG00000034640.10	novel	4191	6	NA	NA	-12	-14540	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	65435868	65440478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_65435900_65440500
Isoform_122962_14	chr3	+	1747	1	Intergenic	novelGene_7025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAGAAAGAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65550775	65552522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_65550800_65552500
Isoform_122963_19	chr3	-	176	1	Intergenic	novelGene_7026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	65601636	65601460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_65601500_65601600
Isoform_122964_11	chr3	+	305	1	Intergenic	novelGene_6916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGAGCTATACAT	4113	False	NA	NA	False	NA	NA	NA	9662487	9662792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_9662500_9662800
Isoform_122968_19	chr5	-	173	1	Intergenic	novelGene_8973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129828160	129827987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_129828000_129828200
Isoform_12297_7	chr11	-	3673	25	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-7	30719	-7	-30719	5prime_fragment	FALSE	canonical	3	105	junction_11	31.3773792811885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGATTGATGTTTCTACT	NA	False	NA	4	True	AATAAA	-24	NA	33463753	33192513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_122970_9	chr3	-	174	1	Intergenic	novelGene_7027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTCAACACT	NA	False	NA	NA	False	NA	NA	NA	66906361	66906187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_66906200_66906400
Isoform_122972_5	chr3	-	7578	1	Intergenic	novelGene_7028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-25	NA	67007412	66999834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_66999800_67007400
Isoform_122973_12	chr3	+	3255	1	Antisense	novelGene_ENSMUSG00000040209.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTTAGTGGGACTGTG	NA	False	NA	5	True	NA	NA	NA	9673818	9677073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_9673800_9677100
Isoform_122976_7	chr3	+	154	1	Intergenic	novelGene_7029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAAAATCTAAAA	8622	False	NA	NA	False	NA	NA	NA	67438764	67438918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_67438800_67438900
Isoform_122978_14	chr3	+	177	1	Intergenic	novelGene_7030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGACAA	NA	False	NA	NA	False	NA	NA	NA	68280159	68280336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_68280200_68280300
Isoform_122980_3	chr3	-	3416	1	Antisense	novelGene_ENSMUSG00000027777.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAAAACTACCTAATA	NA	False	NA	NA	False	NA	NA	NA	68401395	68397979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_68398000_68401400
Isoform_122981_108	chr3	-	175	1	Intergenic	novelGene_7031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTGGAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	68506409	68506234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_68506200_68506400
Isoform_122984_30	chr9	-	178	1	Intergenic	novelGene_11124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21399983	21399805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21399800_21400000
Isoform_122985_8	chr3	+	2897	1	FSM	ENSMUSG00000046999.3	ENSMUST00000054551.3	2578	1	-326	7	-326	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTATTTCTCTGTGCAT	NA	False	NA	NA	False	ATTAAA	-37	NA	68776592	68779489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_68776600_68779500
Isoform_122986_21	chr3	+	2806	1	FSM	ENSMUSG00000046999.3	ENSMUST00000054551.3	2578	1	-233	5	-233	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTCTCTGTGCATTT	NA	False	NA	NA	False	ATTAAA	-39	NA	68776685	68779491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_68776700_68779500
Isoform_122992_37	chr3	+	172	1	Intergenic	novelGene_7032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAGAGACCAG	NA	False	NA	NA	False	NA	NA	NA	68930243	68930415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_68930200_68930400
Isoform_122993_30	chr3	+	170	1	Intergenic	novelGene_7033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAGAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	68938002	68938172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_68938000_68938200
Isoform_12300_11	chr11	-	3324	20	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-16	84597	-16	2	5prime_fragment	FALSE	canonical	3	105	junction_6	31.5999053261319	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTACTTGTTTTATGGC	NA	False	NA	NA	False	AATAAA	-30	NA	33463762	33246391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_123007_4	chr3	+	4916	1	Antisense	novelGene_ENSMUSG00000027782.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68983217	68988133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_68983200_68988100
Isoform_12301_3	chr11	-	3232	19	NIC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	3	45	junction_17	44.9961589581561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAATTACTTGTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	33463765	33246395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
Isoform_123010_28	chr3	-	168	1	Intergenic	novelGene_6917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAACACACAGG	NA	False	NA	NA	False	NA	NA	NA	9980205	9980037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_9980000_9980200
Isoform_123011_3	chr3	-	1848	1	Intergenic	novelGene_7034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCACTTTTGCTTATTC	NA	False	NA	NA	False	AATAAA	-19	NA	69224095	69222247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_69222200_69224100
Isoform_123013_9	chr3	-	176	1	Intergenic	novelGene_7035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	69535503	69535327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_69535300_69535500
Isoform_123014_4	chr3	-	2689	1	Antisense	novelGene_ENSMUSG00000027533.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10082259	10079570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_10079600_10082300
Isoform_123015_15	chr3	-	181	1	Intergenic	novelGene_7036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCATTTTTTTTCG	NA	False	NA	NA	False	NA	NA	NA	69556971	69556790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_69556800_69557000
Isoform_123016_180	chr3	-	175	1	Intergenic	novelGene_7037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGAGTGCCCTTC	NA	False	NA	NA	False	NA	NA	NA	69606419	69606244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_69606200_69606400
Isoform_123017_6	chr3	+	221	1	ISM	ENSMUSG00000049230.9	ENSMUST00000061419.9	1830	2	0	4235	0	-4235	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAATCTGATTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	10153169	10153390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_10153200_10153400
Isoform_123018_5	chr3	+	3812	1	Intergenic	novelGene_7038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAAGATTCTGGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	70479343	70483155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_70479300_70483200
Isoform_123019_16	chr3	-	171	1	Intergenic	novelGene_7039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	70836157	70835986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_70836000_70836200
Isoform_12302_3	chr11	-	3199	10	FSM	ENSMUSG00000020159.9	ENSMUST00000020366.8	3280	10	-3	84	-1	-84	multi-exon	FALSE	canonical	0	0	junction_2	0.831479419283098	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAACTTCACTGAGGC	8482	False	NA	NA	False	AATAAA	-9	NA	33528960	33500864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_33502843_33504293_33504482_33504967_33505121_33506929_33507068_33513865_33513949_33517212_33517431_33518066_33518135_33522372_33522492_33523317_33523417_33528805
Isoform_123021_16	chr3	+	178	1	Intergenic	novelGene_7040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	71896888	71897066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_71896900_71897100
Isoform_123022_11	chr3	+	173	1	Intergenic	novelGene_7041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAAAGTGACATCAG	NA	False	NA	NA	False	NA	NA	NA	72398654	72398827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_72398700_72398800
Isoform_123024_3	chr3	-	181	1	Intergenic	novelGene_7042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGATATTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	72617197	72617016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_72617000_72617200
Isoform_123027_7	chr3	+	209	1	Intergenic	novelGene_7044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTCGAAAAGGATGAG	NA	False	NA	NA	False	NA	NA	NA	74764847	74765056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_74764800_74765100
Isoform_123030_4	chr3	-	5181	1	NIC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	99	-2612	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGCTTGTCTTGGTCCC	NA	False	NA	-3	True	NA	NA	NA	75562939	75557758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_75557800_75562900
Isoform_123036_34	chr3	+	189	1	Intergenic	novelGene_7045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATGAACCCAAGC	NA	False	NA	NA	False	NA	NA	NA	76831801	76831990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_76831800_76832000
Isoform_123037_220	chr3	-	177	1	Intergenic	novelGene_6918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCTGAGCAATGA	NA	False	NA	-3	True	NA	NA	NA	10366815	10366638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_10366600_10366800
Isoform_123039_9	chr3	-	1609	1	FSM	ENSMUSG00000037096.7	ENSMUST00000036976.7	444	1	-267	-898	-267	898	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTTAAATGCCATCAGA	NA	False	NA	NA	False	NA	NA	NA	78874373	78872764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_78872800_78874400
Isoform_12304_4	chr11	-	2499	12	NIC	ENSMUSG00000069910.3	novel	2505	12	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	50.1223296933043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATTTTTTAATTCT	NA	False	NA	-4	True	AATAAA	-18	NA	34724463	34700013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713296_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
Isoform_123041_5	chr3	-	200	1	Intergenic	novelGene_7046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCTGAATTACGTGAC	9917	False	NA	NA	False	NA	NA	NA	79119509	79119309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_79119300_79119500
Isoform_123045_206	chr3	+	180	1	Intergenic	novelGene_7047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGTA	NA	False	NA	NA	False	NA	NA	NA	79320221	79320401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_79320200_79320400
Isoform_123047_12	chr3	+	180	1	Intergenic	novelGene_7048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAGAGAGAGA	9	False	NA	NA	False	NA	NA	NA	79345351	79345531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_79345400_79345500
Isoform_123053_5	chr3	+	2890	1	Antisense	novelGene_ENSMUSG00000061175.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79407743	79410633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_79407700_79410600
Isoform_123054_3	chr3	+	577	1	Intergenic	novelGene_7049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79439572	79440149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_79439600_79440100
Isoform_123055_16	chr3	-	176	1	Intergenic	novelGene_7050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCTACCCCCGCCAA	NA	False	NA	NA	False	NA	NA	NA	79488613	79488437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_79488400_79488600
Isoform_123059_8	chr3	-	265	1	Intergenic	novelGene_7051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGAAATGAATGTTCTCT	6355	False	NA	NA	False	NA	NA	NA	79515027	79514762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_79514800_79515000
Isoform_123060_9	chr3	-	172	1	Intergenic	novelGene_7052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGCTTGCA	9852	False	NA	NA	False	NA	NA	NA	79516108	79515936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_79515900_79516100
Isoform_123062_11	chr3	+	152	1	Intergenic	novelGene_7053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGATTTCTGACTGTT	NA	False	NA	NA	False	NA	NA	NA	79516904	79517056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_79516900_79517100
Isoform_123063_22	chr3	+	176	1	Intergenic	novelGene_7054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGTGTGCG	726	False	NA	NA	False	NA	NA	NA	79532742	79532918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_79532700_79532900
Isoform_123064_13	chr3	-	159	1	Intergenic	novelGene_7055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATAAAATAAATCTAAAA	9700	False	NA	NA	False	NA	NA	NA	79558428	79558269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_79558300_79558400
Isoform_123065_25	chr3	+	261	1	Intergenic	novelGene_6919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	AATAAA	-9	NA	10418043	10418304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_10418000_10418300
Isoform_123067_20	chr3	+	176	1	Intergenic	novelGene_7056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	80406249	80406425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_80406200_80406400
Isoform_123069_86	chr3	-	198	1	Intergenic	novelGene_7057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTCAAAGCAGGACTG	NA	False	NA	-5	True	NA	NA	NA	82649614	82649416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_82649400_82649600
Isoform_12307_326	chr11	-	2473	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	32	0	-17	0	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGTATTTTTTAAT	NA	False	NA	-7	True	AATAAA	-15	NA	34724436	34700016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
Isoform_123070_6	chr3	+	952	1	NIC	ENSMUSG00000027536.7	novel	6188	5	NA	NA	-10	-27438	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	10432007	10432959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_10432000_10433000
Isoform_123071_4	chr3	+	913	1	Intergenic	novelGene_7058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTTGGCATTT	NA	False	NA	NA	False	NA	NA	NA	83477339	83478252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_83477300_83478300
Isoform_123073_4	chr3	+	179	1	Intergenic	novelGene_7059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	83739891	83740070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_83739900_83740100
Isoform_123074_8	chr3	+	159	1	Intergenic	novelGene_7060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4453	False	NA	NA	False	NA	NA	NA	83778306	83778465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_83778300_83778500
Isoform_123075_7	chr3	-	173	1	Intergenic	novelGene_7061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	83906146	83905973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_83906000_83906100
Isoform_123076_27	chr3	-	2506	1	Intergenic	novelGene_6920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10445319	10442813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_10442800_10445300
Isoform_123078_4	chr3	+	4813	1	Intergenic	novelGene_7062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAACGATCCAA	NA	False	NA	NA	False	NA	NA	NA	84057571	84062384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_84057600_84062400
Isoform_123087_3	chr3	+	168	1	Intergenic	novelGene_7063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAACAGATT	NA	False	NA	NA	False	NA	NA	NA	84426365	84426533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_84426400_84426500
Isoform_123088_189	chr12	-	176	1	Intergenic	novelGene_2416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8717100	8716924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_8716900_8717100
Isoform_123089_3	chr3	-	4603	1	Intergenic	novelGene_7065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAATGTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	84721703	84717100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_84717100_84721700
Isoform_12309_20	chr11	-	2410	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	-8	103	-8	-103	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTTTAAAGTGTGAAG	NA	False	NA	-110	True	AATATA	-11	NA	34724476	34700119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
Isoform_123091_24	chr3	-	172	1	Intergenic	novelGene_7066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTAAAAAAAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	85503138	85502966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_85503000_85503100
Isoform_123092_11	chr3	+	176	1	Intergenic	novelGene_7067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGATCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	85767590	85767766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_85767600_85767800
Isoform_123095_6	chr3	+	1272	1	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	15	-154569	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85878430	85879702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_85878400_85879700
Isoform_123097_3	chr3	+	177	1	Intergenic	novelGene_7068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	85903211	85903388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_85903200_85903400
Isoform_123098_14	chr3	+	204	1	Intergenic	novelGene_7069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTGCTTAGAACTA	NA	False	NA	NA	False	NA	NA	NA	85937230	85937434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_85937200_85937400
Isoform_1231_2627	SIRV7	-	2463	5	FSM	SIRV7A	SIRV701	2462	5	1	-2	1	-1	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	2627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147922	1001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
Isoform_123100_3	chr3	+	159	1	Intergenic	novelGene_7070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAGTA	2454	False	NA	NA	False	NA	NA	NA	85973682	85973841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_85973700_85973800
Isoform_123101_3	chr3	-	1580	1	NIC	ENSMUSG00000027534.17	novel	2512	7	NA	NA	0	-19586	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGGAAAAAAAAAGAAGAA	NA	False	NA	NA	False	AATAAA	-14	NA	10505162	10503582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_10503600_10505200
Isoform_123102_6	chr3	+	289	1	Intergenic	novelGene_7071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGGAA	3441	False	NA	NA	False	NA	NA	NA	86020679	86020968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_86020700_86021000
Isoform_123103_187	chr3	+	177	1	Intergenic	novelGene_7072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7339	False	NA	NA	False	NA	NA	NA	86024577	86024754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_86024600_86024800
Isoform_123104_187	chr3	+	178	1	Intergenic	novelGene_7073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7339	False	NA	NA	False	NA	NA	NA	86024577	86024755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_86024600_86024800
Isoform_123109_27	chr3	-	187	1	Intergenic	novelGene_7074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAGAAAATGCC	NA	False	NA	NA	False	NA	NA	NA	86124153	86123966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_86124000_86124200
Isoform_123111_10	chr3	-	174	1	Intergenic	novelGene_7075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	86128892	86128718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_86128700_86128900
Isoform_123112_23	chr3	-	170	1	Intergenic	novelGene_7076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	86174674	86174504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_86174500_86174700
Isoform_123113_3	chr3	-	176	1	Intergenic	novelGene_7077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAGGGCCAATCTA	NA	False	NA	NA	False	NA	NA	NA	86176724	86176548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_86176500_86176700
Isoform_123114_22	chr3	-	175	1	Intergenic	novelGene_7078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTTTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	86210365	86210190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_86210200_86210400
Isoform_123117_3	chr3	-	174	1	Intergenic	novelGene_7079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAATAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86471870	86471696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_86471700_86471900
Isoform_123118_5	chr3	+	176	1	Intergenic	novelGene_7080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	5544	False	NA	NA	False	NA	NA	NA	86545439	86545615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_86545400_86545600
Isoform_123124_3	chr3	-	438	1	FSM	ENSMUSG00000094392.2	ENSMUST00000119949.3	136	1	-65	-237	-65	237	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTGATGAAAATAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	86579540	86579102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_86579100_86579500
Isoform_123130_15	chr3	-	172	1	Intergenic	novelGene_7081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	86747921	86747749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_86747700_86747900
Isoform_123132_324	chr3	-	1692	1	Intergenic	novelGene_6921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	AATAAA	-32	NA	11080250	11078558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_11078600_11080200
Isoform_123142_5	chr3	-	173	1	Intergenic	novelGene_7082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAATGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	86947258	86947085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_86947100_86947300
Isoform_123143_74	chr11	+	163	1	Intergenic	novelGene_1981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	80	False	NA	NA	False	NA	NA	NA	87932028	87932191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87932000_87932200
Isoform_123146_14	chr3	-	179	1	Intergenic	novelGene_7083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAATAACAGA	NA	False	NA	NA	False	NA	NA	NA	87120815	87120636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_87120600_87120800
Isoform_123148_20	chr3	+	177	1	Intergenic	novelGene_7084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGGGGGGCAGGGGTA	NA	False	NA	4	True	NA	NA	NA	87398829	87399006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_87398800_87399000
Isoform_123154_7	chr3	+	210	1	Intergenic	novelGene_7085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAAAGTCCTGAGTTCA	NA	False	NA	NA	False	NA	NA	NA	87786765	87786975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_87786800_87787000
Isoform_123155_91	chr3	-	176	1	Intergenic	novelGene_6922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAGAAGTACAA	NA	False	NA	NA	False	NA	NA	NA	11875669	11875493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_11875500_11875700
Isoform_123156_14	chr17	+	181	1	Intergenic	novelGene_4687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAATAAAAAAAAAA	3779	False	NA	NA	False	NA	NA	NA	12913766	12913947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_12913800_12913900
Isoform_123157_8	chr3	+	195	1	Intergenic	novelGene_7087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAACAAAACTACAGCA	NA	False	NA	NA	False	NA	NA	NA	87789502	87789697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_87789500_87789700
Isoform_123158_50	chr3	-	195	1	Intergenic	novelGene_7088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTATTTG	NA	False	NA	NA	False	NA	NA	NA	87798826	87798631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_87798600_87798800
Isoform_123159_22	chr3	-	186	1	Intergenic	novelGene_7089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	87807826	87807640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_87807600_87807800
Isoform_123178_40	chr3	-	192	1	Intergenic	novelGene_7090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAACCCTG	8508	False	NA	NA	False	NA	NA	NA	87840607	87840415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_87840400_87840600
Isoform_123185_3	chr3	-	174	1	Intergenic	novelGene_7091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTAAAAAAATCACACA	NA	False	NA	NA	False	NA	NA	NA	87872543	87872369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_87872400_87872500
Isoform_123190_16	chr3	-	1995	1	Genic_Genomic	ENSMUSG00000028070.8	novel	NA	NA	NA	NA	-19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965821	87963826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_-_87963800_87965800
Isoform_123191_5	chr3	+	154	1	Intergenic	novelGene_7092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAAATTT	9742	False	NA	NA	False	NA	NA	NA	87986953	87987107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_87987000_87987100
Isoform_123193_45	chr3	+	173	1	Intergenic	novelGene_7093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATAAAAGTAAATG	1993	False	NA	NA	False	NA	NA	NA	88032871	88033044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88032900_88033000
Isoform_123196_10	chr3	+	222	1	Intergenic	novelGene_7095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCTGAAGGCAGAGGCA	933	False	NA	NA	False	NA	NA	NA	88044073	88044295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88044100_88044300
Isoform_123199_10	chr3	-	180	1	Intergenic	novelGene_7096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	88167423	88167243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88167200_88167400
Isoform_123200_4	chr3	-	173	1	Intergenic	novelGene_7097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGACCTTATAAG	NA	False	NA	NA	False	NA	NA	NA	88178758	88178585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88178600_88178800
Isoform_123201_19	chr3	+	187	1	Intergenic	novelGene_7098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATATTTTTTAA	9060	False	NA	NA	False	NA	NA	NA	88179390	88179577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88179400_88179600
Isoform_123202_25	chr3	-	177	1	Intergenic	novelGene_7099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAGAAAGATAGA	NA	False	NA	NA	False	NA	NA	NA	88180156	88179979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88180000_88180200
Isoform_123205_50	chr3	+	198	1	Intergenic	novelGene_7100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGAAAAGTCGGCCAGG	NA	False	NA	NA	False	NA	NA	NA	88186376	88186574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88186400_88186600
Isoform_123208_13	chr3	-	169	1	Intergenic	novelGene_7101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTAACT	NA	False	NA	NA	False	NA	NA	NA	88200759	88200590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88200600_88200800
Isoform_123212_8	chr3	-	1447	1	Genic_Genomic	ENSMUSG00000001420.14	novel	NA	NA	NA	NA	-43	-1607	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTTGCAGTGTCATC	NA	False	NA	NA	False	AATAAA	-14	NA	88243498	88242051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_-_88242100_88243500
Isoform_123213_3	chr3	-	5412	2	Antisense	novelGene_ENSMUSG00000001415.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	3	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGCCCTGCCTTAAAAG	6576	False	NA	NA	False	NA	NA	NA	88270335	88264890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_88270262_88270294
Isoform_123220_55	chr3	+	2829	1	FSM	ENSMUSG00000095661.2	ENSMUST00000066794.9	2798	1	-46	15	-46	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	12920849	12923678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_12920800_12923700
Isoform_123222_18	chr3	+	179	1	Intergenic	novelGene_7102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAACAACAGAGTTGGGC	4022	False	NA	NA	False	NA	NA	NA	88330450	88330629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88330400_88330600
Isoform_123226_22	chr3	+	173	1	Intergenic	novelGene_7103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTAAAAACAAAACAAA	NA	False	NA	1	True	NA	NA	NA	88395165	88395338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88395200_88395300
Isoform_123227_3	chr3	+	4898	1	ISM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	4101	3	4101	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTTGTCTTTCACTGT	2682	False	NA	14	True	ATTAAA	-44	NA	88443802	88448700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_88443800_88448700
Isoform_123228_5	chr3	+	4409	1	ISM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	4589	4	4589	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCTTGTCTTTCACTG	3170	False	NA	13	True	ATTAAA	-43	NA	88444290	88448699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_88444300_88448700
Isoform_123231_6	chr3	+	2798	1	ISM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	6201	3	6201	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTTGTCTTTCACTGT	4782	False	NA	14	True	ATTAAA	-44	NA	88445902	88448700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_88445900_88448700
Isoform_123238_7	chr3	+	1407	1	ISM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	7592	3	7592	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTTGTCTTTCACTGT	495	False	NA	14	True	ATTAAA	-44	NA	88447293	88448700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_88447300_88448700
Isoform_12324_1911	chr11	-	2105	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	4	0	4	0	multi-exon	FALSE	canonical	3	825	junction_11	73.3093807511866	1911	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	-1	True	AGTAAA	-17	NA	35725329	35699207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
Isoform_123240_8	chr3	-	172	1	Intergenic	novelGene_7104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACAATTTCCATT	NA	False	NA	NA	False	NA	NA	NA	88466694	88466522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88466500_88466700
Isoform_123241_4	chr3	-	3327	1	Antisense	novelGene_ENSMUSG00000008604.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAAACCAAACCAAAA	4100	False	NA	NA	False	NA	NA	NA	88477811	88474484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_88474500_88477800
Isoform_123250_56	chr3	-	180	1	Intergenic	novelGene_7105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCTGATCA	NA	False	NA	-26	True	NA	NA	NA	88482801	88482621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88482600_88482800
Isoform_123251_10	chr3	+	1493	1	Genic_Genomic	ENSMUSG00000041355.14	novel	NA	NA	NA	NA	-78	-2686	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	88483104	88484597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_+_88483100_88484600
Isoform_123255_4	chr3	-	176	1	Intergenic	novelGene_7106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAATAACTG	9411	False	NA	NA	False	NA	NA	NA	88489192	88489016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88489000_88489200
Isoform_123260_5	chr3	-	177	1	Intergenic	novelGene_7107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAGAAGAGG	8644	False	NA	NA	False	NA	NA	NA	88502472	88502295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88502300_88502500
Isoform_123261_74	chr3	-	174	1	Intergenic	novelGene_7108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGACAAAAACAAAA	1995	False	NA	NA	False	NA	NA	NA	88510617	88510443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88510400_88510600
Isoform_123264_4	chr3	-	176	1	Antisense	novelGene_ENSMUSG00000028059.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	9475	False	NA	NA	False	NA	NA	NA	88544977	88544801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_88544800_88545000
Isoform_123265_10	chr3	-	210	1	Intergenic	novelGene_7110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8547	False	NA	NA	False	NA	NA	NA	88545905	88545695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88545700_88545900
Isoform_123266_9	chr3	-	171	1	Intergenic	novelGene_7111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	88586695	88586524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88586500_88586700
Isoform_123269_23	chr3	-	176	1	Intergenic	novelGene_7112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88590135	88589959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88590000_88590100
Isoform_123270_263	chr15	+	179	1	Intergenic	novelGene_3954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	75722443	75722622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_75722400_75722600
Isoform_123271_13	chr3	+	246	1	Intergenic	novelGene_7113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTTAGGAACTAAACT	3509	False	NA	NA	False	NA	NA	NA	88590403	88590649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88590400_88590600
Isoform_123272_5	chr3	-	169	1	Intergenic	novelGene_7114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGAGCCTGGTAAAA	7932	False	NA	NA	False	NA	NA	NA	88599402	88599233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88599200_88599400
Isoform_123273_39	chr3	-	177	1	Intergenic	novelGene_7115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	7673	False	NA	NA	False	NA	NA	NA	88599661	88599484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88599500_88599700
Isoform_123274_10	chr3	-	170	1	Intergenic	novelGene_7116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	4495	False	NA	NA	False	NA	NA	NA	88602839	88602669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88602700_88602800
Isoform_123275_3	chr3	-	332	1	Intergenic	novelGene_7117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACATACATATGAATAAA	NA	False	NA	NA	False	NA	NA	NA	88623190	88622858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88622900_88623200
Isoform_123279_5	chr3	+	442	1	NIC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	21	-49909	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	88682543	88682985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_88682500_88683000
Isoform_123280_3	chr3	+	179	1	Intergenic	novelGene_7118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGCAAAACAAAAAGATAT	2519	False	NA	NA	False	NA	NA	NA	88688346	88688525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88688300_88688500
Isoform_123281_7	chr9	-	193	1	Intergenic	novelGene_11154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAATAAAAAAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	25574982	25574789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_25574800_25575000
Isoform_123283_165	chr3	-	178	1	Intergenic	novelGene_7119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	8669	False	NA	NA	False	NA	NA	NA	88747296	88747118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88747100_88747300
Isoform_123286_3	chr3	-	156	1	Intergenic	novelGene_7120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88784734	88784578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88784600_88784700
Isoform_123287_29	chr3	+	178	1	Intergenic	novelGene_7121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGAGCAGTTTCTG	NA	False	NA	3	True	NA	NA	NA	88801218	88801396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88801200_88801400
Isoform_123288_70	chr3	-	167	1	Intergenic	novelGene_7122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTTTTTTTTAAAA	NA	False	NA	0	True	NA	NA	NA	88812303	88812136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88812100_88812300
Isoform_123290_9	chr3	+	168	1	Intergenic	novelGene_7123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTTAAAAAAAAAGGCTTA	NA	False	NA	NA	False	NA	NA	NA	88862486	88862654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88862500_88862700
Isoform_123291_6	chr3	-	186	1	Intergenic	novelGene_7124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTTCAA	NA	False	NA	NA	False	NA	NA	NA	88870679	88870493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88870500_88870700
Isoform_123294_20	chr3	+	200	1	Intergenic	novelGene_7125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGTTTGTGCACCAA	NA	False	NA	NA	False	NA	NA	NA	88940932	88941132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88940900_88941100
Isoform_123296_16	chr3	-	2381	1	NIC	ENSMUSG00000078784.9	novel	435	4	NA	NA	3	313	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14676311	14673930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_14673900_14676300
Isoform_123298_3	chr3	+	1074	1	ISM	ENSMUSG00000028053.14	ENSMUST00000186583.7	11644	28	127679	1	25499	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGAGTCTTTGTGCCT	710	False	NA	3	True	ATTAAA	-19	NA	88985607	88986681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_88985600_88986700
Isoform_123300_13	chr3	+	182	1	Intergenic	novelGene_7126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTTTTTCATGTGCT	8713	False	NA	NA	False	NA	NA	NA	88993610	88993792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88993600_88993800
Isoform_123303_39	chr3	-	221	1	Intergenic	novelGene_6923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAATTAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-18	NA	14685787	14685566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_14685600_14685800
Isoform_123305_9	chr3	+	175	1	Intergenic	novelGene_7127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	89025989	89026164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89026000_89026200
Isoform_123306_9	chr3	-	188	1	Intergenic	novelGene_7128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAGAGTATAAT	NA	False	NA	NA	False	NA	NA	NA	89029436	89029248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89029200_89029400
Isoform_123307_67	chr3	-	236	1	Intergenic	novelGene_7129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATATTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	89034609	89034373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89034400_89034600
Isoform_123308_22	chr3	-	184	1	Intergenic	novelGene_7130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGACAGAAAGAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	89063125	89062941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89062900_89063100
Isoform_123312_36	chr3	-	174	1	Intergenic	novelGene_7131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	1940	False	NA	NA	False	NA	NA	NA	89100078	89099904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89099900_89100100
Isoform_123313_32	chr3	-	160	1	Intergenic	novelGene_7132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	89109915	89109755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89109800_89109900
Isoform_123314_9	chr3	-	171	1	Intergenic	novelGene_7133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89128245	89128074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89128100_89128200
Isoform_123315_9	chr3	-	179	1	Intergenic	novelGene_7134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAATAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	89173300	89173121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89173100_89173300
Isoform_123317_6	chr3	-	2292	1	NIC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	-11	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177844	89175552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_89175600_89177800
Isoform_123319_68	chr3	+	177	1	Intergenic	novelGene_7135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1699	False	NA	NA	False	NA	NA	NA	89304591	89304768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89304600_89304800
Isoform_123321_8	chr3	+	983	1	Antisense	novelGene_ENSMUSG00000042642.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTTGTAGACCAGGCT	NA	False	NA	NA	False	NA	NA	NA	89314575	89315558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_89314600_89315600
Isoform_123323_4	chr3	-	2618	1	Antisense	novelGene_ENSMUSG00000042626.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAATACAAGAAATAAAAG	9878	False	NA	NA	False	NA	NA	NA	89330284	89327666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_89327700_89330300
Isoform_123324_5	chr3	-	2464	1	Antisense	novelGene_ENSMUSG00000042626.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTGGGTGTGGTGGTGC	9878	False	NA	NA	False	AATAAA	-37	NA	89330284	89327820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_89327800_89330300
Isoform_123337_5	chr3	-	173	1	Intergenic	novelGene_7136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATCCTGT	4692	False	NA	NA	False	NA	NA	NA	89345292	89345119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89345100_89345300
Isoform_123338_72	chr16	+	178	1	Intergenic	novelGene_4375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	18660898	18661076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18660900_18661100
Isoform_123340_30	chr3	+	190	1	Intergenic	novelGene_7137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGAAAAGGCG	965	False	NA	NA	False	NA	NA	NA	89390296	89390486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89390300_89390500
Isoform_123343_26	chr3	+	176	1	Intergenic	novelGene_7138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAGTTAATAATGAT	NA	False	NA	NA	False	NA	NA	NA	89602308	89602484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89602300_89602500
Isoform_123346_3	chr3	-	1978	1	FSM	ENSMUSG00000042579.3	ENSMUST00000195940.2	4671	1	-465	3158	-16	-3158	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTCAACCTGACAGG	2622	False	NA	NA	False	NA	NA	NA	89680563	89678585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89678600_89680600
Isoform_123347_4	chr3	-	735	1	FSM	ENSMUSG00000042579.3	ENSMUST00000195940.2	4671	1	-445	4381	4	-4381	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTTTAAGAAATTCGT	2642	False	NA	NA	False	NA	NA	NA	89680543	89679808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_89679800_89680500
Isoform_123350_18	chr3	+	252	1	Intergenic	novelGene_7139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89700902	89701154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89700900_89701200
Isoform_123351_166	chr3	+	176	1	Intergenic	novelGene_7140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCATACACATAAG	NA	False	NA	NA	False	NA	NA	NA	89749823	89749999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89749800_89750000
Isoform_123353_17	chr3	+	286	1	Intergenic	novelGene_7141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAGTAATATATT	NA	False	NA	15	True	AATAAA	-11	NA	89753561	89753847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89753600_89753800
Isoform_123354_47	chr3	+	174	1	Intergenic	novelGene_7142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGCC	9566	False	NA	NA	False	NA	NA	NA	89791860	89792034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89791900_89792000
Isoform_123355_12	chr3	+	174	1	Intergenic	novelGene_7143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAATAAAAAAAAAAGGGA	1565	False	NA	NA	False	NA	NA	NA	89800923	89801097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89800900_89801100
Isoform_123356_16	chr3	+	159	1	Intergenic	novelGene_7144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATTAATTAATA	8368	False	NA	NA	False	NA	NA	NA	89807726	89807885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89807700_89807900
Isoform_123357_3	chr3	+	164	1	Intergenic	novelGene_7145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGAAAGAAA	1190	False	NA	NA	False	NA	NA	NA	89821375	89821539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89821400_89821500
Isoform_123360_43	chr3	+	176	1	Intergenic	novelGene_7146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCACAGATC	NA	False	NA	NA	False	NA	NA	NA	89877561	89877737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_89877600_89877700
Isoform_123364_13	chr3	-	160	1	Intergenic	novelGene_7148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAACATTTTAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	89892902	89892742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89892700_89892900
Isoform_123366_10	chr3	-	253	1	Intergenic	novelGene_7149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTTTG	5809	False	NA	NA	False	NA	NA	NA	89898703	89898450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89898400_89898700
Isoform_123367_21	chr3	+	4844	1	Antisense	novelGene_ENSMUSG00000077569.3_AS_novelGene_ENSMUSG00000098397.3_AS_novelGene_ENSMUSG00000042520.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAGAAAAAAAAA	1372	False	NA	NA	False	AGTAAA	-24	NA	89914267	89919111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_89914300_89919100
Isoform_123370_14	chr3	+	175	1	Antisense	novelGene_ENSMUSG00000042520.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	89944069	89944244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_89944100_89944200
Isoform_123372_4	chr3	-	229	1	Intergenic	novelGene_7150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89965433	89965204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89965200_89965400
Isoform_123375_20	chr3	+	173	1	ISM	ENSMUSG00000118504.2	ENSMUST00000239082.2	2360	5	7140	14	7140	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAGTTCAGATTT	9744	False	NA	1	True	NA	NA	NA	89973189	89973362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_89973200_89973400
Isoform_123378_6	chr3	-	1793	1	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	5110	False	NA	NA	False	NA	NA	NA	89997167	89995374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_89995400_89997200
Isoform_123380_25	chr3	-	161	1	Intergenic	novelGene_7151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATCAAAAAAAAA	8683	False	NA	NA	False	NA	NA	NA	90000614	90000453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_90000500_90000600
Isoform_123392_16	chr3	-	176	1	Intergenic	novelGene_7152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90062649	90062473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_90062500_90062600
Isoform_123395_44	chr3	-	175	1	Intergenic	novelGene_7153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTTCTGGAACCC	2910	False	NA	NA	False	NA	NA	NA	90084552	90084377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_90084400_90084600
Isoform_123396_8	chr3	+	481	1	FSM	ENSMUSG00000103034.2	ENSMUST00000192045.2	490	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGGGGCACAGA	NA	False	NA	NA	False	AATAAA	-24	NA	5815865	5816346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_5815900_5816300
Isoform_123398_3	chr3	+	158	1	Intergenic	novelGene_6924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	15610124	15610282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_15610100_15610300
Isoform_123403_5	chr3	-	171	1	Intergenic	novelGene_7154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACAAAACAGC	NA	False	NA	NA	False	NA	NA	NA	90193954	90193783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_90193800_90194000
Isoform_123405_135	chr3	+	1401	1	Intergenic	novelGene_6925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	15685355	15686756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_15685400_15686800
Isoform_123411_11	chr3	-	224	1	Intergenic	novelGene_7156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTTTTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	90278183	90277959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_90278000_90278200
Isoform_123417_7	chr3	-	171	1	Intergenic	novelGene_7157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	90350689	90350518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_90350500_90350700
Isoform_123419_11	chr3	+	171	1	Intergenic	novelGene_7158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90381900	90382071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_90381900_90382100
Isoform_123431_3	chr3	+	2823	1	Antisense	novelGene_ENSMUSG00000001017.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAAAATCGAACACCCA	NA	False	NA	NA	False	NA	NA	NA	90413240	90416063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_90413200_90416100
Isoform_123432_53	chr3	-	177	1	Intergenic	novelGene_7159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATCTGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	90418048	90417871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_90417900_90418000
Isoform_123433_5	chr3	-	3294	1	Genic_Genomic	ENSMUSG00000044080.10	novel	NA	NA	NA	NA	-48	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTGTACCCTCTGG	NA	False	NA	-2	True	AATAAA	-21	NA	90421633	90418339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_-_90418300_90421600
Isoform_123434_7	chr3	+	174	1	Intergenic	novelGene_7160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	90418823	90418997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_90418800_90419000
Isoform_123435_4	chr3	-	184	1	Intergenic	novelGene_7161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATTCTGAAAAAAAA	1182	False	NA	NA	False	NA	NA	NA	90453918	90453734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_90453700_90453900
Isoform_123436_3	chr3	+	163	1	Intergenic	novelGene_7162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGTAGGCTTTAAAG	4860	False	NA	NA	False	NA	NA	NA	90481030	90481193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_90481000_90481200
Isoform_123438_53	chr3	+	211	1	Intergenic	novelGene_7163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91870048	91870259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_91870000_91870300
Isoform_123440_3	chr3	+	215	1	Intergenic	novelGene_7164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGGATAGTCTGTGCT	NA	False	NA	NA	False	AAGAAA	-22	NA	91930878	91931093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_91930900_91931100
Isoform_123441_44	chr3	-	1384	1	FSM	ENSMUSG00000042165.9	ENSMUST00000192538.2	1392	1	8	0	8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTGTTCCAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	92336722	92335338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_92335300_92336700
Isoform_123446_3	chr3	+	177	1	Intergenic	novelGene_7165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGTATAATATG	7509	False	NA	NA	False	NA	NA	NA	92698514	92698691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_92698500_92698700
Isoform_123455_5	chr3	+	1056	1	Intergenic	novelGene_7166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCTCCTCCCCATCTC	NA	False	NA	NA	False	NA	NA	NA	93307598	93308654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_93307600_93308700
Isoform_123459_61	chr3	+	176	1	Intergenic	novelGene_7167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTTCCTTTTACA	9986	False	NA	NA	False	NA	NA	NA	93457816	93457992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_93457800_93458000
Isoform_123467_9	chr3	-	175	1	Intergenic	novelGene_7168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATAAAAAAAGAAATGTC	NA	False	NA	NA	False	NA	NA	NA	93487912	93487737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_93487700_93487900
Isoform_123468_26	chr3	+	173	1	Intergenic	novelGene_7169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGAAGTACCCTGG	NA	False	NA	4	True	NA	NA	NA	93491221	93491394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_93491200_93491400
Isoform_123469_9	chr3	-	4195	2	Intergenic	novelGene_7170	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	41	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTATTTTATTAGCTA	NA	False	NA	NA	False	NA	NA	NA	93608684	93604459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_93608455_93608484
Isoform_123475_49	chr3	+	180	1	Intergenic	novelGene_7171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	93869019	93869199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_93869000_93869200
Isoform_123494_6	chr3	+	175	1	Intergenic	novelGene_7172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAAAAAAAAATACAT	5384	False	NA	NA	False	NA	NA	NA	94448714	94448889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_94448700_94448900
Isoform_123497_7	chr3	+	181	1	Intergenic	novelGene_7173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAAATATTCAATTCC	NA	False	NA	NA	False	NA	NA	NA	94558553	94558734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_94558600_94558700
Isoform_12350_446	chr11	-	4527	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	1	3	1	-3	multi-exon	FALSE	canonical	3	205	junction_16	29.6517319327484	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTCTTGTCATTTGT	8118	False	NA	NA	False	AATAAA	-15	NA	35871353	35729229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
Isoform_123512_4	chr3	-	173	1	Intergenic	novelGene_7175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGGATTGTATA	NA	False	NA	NA	False	NA	NA	NA	94795747	94795574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_94795600_94795700
Isoform_123514_42	chr3	-	177	1	Intergenic	novelGene_7176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATTCAAATGCA	NA	False	NA	NA	False	NA	NA	NA	94809360	94809183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_94809200_94809400
Isoform_123515_5	chr3	-	160	1	Intergenic	novelGene_7177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	94820047	94819887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_94819900_94820000
Isoform_123516_77	chr3	-	176	1	Intergenic	novelGene_7178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATACAACAATAAC	7799	False	NA	-1	True	NA	NA	NA	94830548	94830372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_94830400_94830500
Isoform_123517_6	chr3	+	179	1	Intergenic	novelGene_7179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	94835738	94835917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_94835700_94835900
Isoform_123518_4	chr3	-	213	1	Intergenic	novelGene_7180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGACCCCAGATTTGAT	NA	False	NA	NA	False	NA	NA	NA	94842670	94842457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_94842500_94842700
Isoform_123521_15	chr3	+	241	1	Intergenic	novelGene_7181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAACACTTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	94879600	94879841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_94879600_94879800
Isoform_123522_5	chr3	+	5184	1	Genic_Genomic	ENSMUSG00000038861.15	novel	NA	NA	NA	NA	-16	-16046	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	94882025	94887209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_+_94882000_94887200
Isoform_123523_48	chr3	+	215	1	Intergenic	novelGene_7182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAAGACTGAGATGGCA	NA	False	NA	NA	False	NA	NA	NA	94928495	94928710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_94928500_94928700
Isoform_123524_3	chr3	+	3212	1	Intergenic	novelGene_7183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3338	False	NA	NA	False	NA	NA	NA	94936442	94939654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_94936400_94939700
Isoform_123525_69	chr3	+	171	1	Intergenic	novelGene_7184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6378	False	NA	NA	False	NA	NA	NA	94939482	94939653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_94939500_94939700
Isoform_123531_4	chr3	+	307	1	Intergenic	novelGene_7185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATTTTTGTTAAAGA	5632	False	NA	NA	False	NA	NA	NA	94959801	94960108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_94959800_94960100
Isoform_123532_6	chr3	+	173	1	Intergenic	novelGene_7186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	94968709	94968882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_94968700_94968900
Isoform_123533_10	chr3	-	174	1	Intergenic	novelGene_7187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	94984133	94983959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_94984000_94984100
Isoform_123535_3	chr3	-	174	1	Intergenic	novelGene_7188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGTAA	5676	False	NA	NA	False	NA	NA	NA	94997736	94997562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_94997600_94997700
Isoform_12354_42	chr11	-	4600	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	-69	0	-69	0	multi-exon	FALSE	canonical	3	205	junction_16	29.6517319327484	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTCATTTGTCCC	8048	False	NA	NA	False	AATAAA	-18	NA	35871423	35729226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
Isoform_123540_4	chr3	-	166	1	Antisense	novelGene_ENSMUSG00000008958.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATCTTAAAAAAAAAAAA	1346	False	NA	NA	False	NA	NA	NA	95024010	95023844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_95023800_95024000
Isoform_123541_178	chr3	-	177	1	Intergenic	novelGene_7189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTGT	8523	False	NA	NA	False	NA	NA	NA	95028194	95028017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_95028000_95028200
Isoform_123544_74	chr3	-	176	1	Intergenic	novelGene_7190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATAGAT	NA	False	NA	NA	False	NA	NA	NA	95083648	95083472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_95083500_95083600
Isoform_123545_5	chr3	-	2392	1	ISM	ENSMUSG00000038766.17	ENSMUST00000107209.8	8357	9	33545	7	7734	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATGTCAGTATTGTT	NA	False	NA	-29	True	AATAAA	-11	NA	95091475	95089083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_95089100_95091500
Isoform_123548_3	chr3	-	4567	1	ISM	ENSMUSG00000038766.17	ENSMUST00000107209.8	8357	9	31374	3	5563	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAGTATTGTTGAAT	NA	False	NA	-25	True	AATAAA	-15	NA	95093646	95089079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_95089100_95093600
Isoform_123550_5	chr3	-	4074	1	ISM	ENSMUSG00000038766.17	ENSMUST00000107209.8	8357	9	31867	3	6056	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAGTATTGTTGAAT	NA	False	NA	-25	True	AATAAA	-15	NA	95093153	95089079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_95089100_95093200
Isoform_123559_6	chr3	+	174	1	Intergenic	novelGene_7191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTCTTTGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	95182010	95182184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95182000_95182200
Isoform_123562_3	chr3	+	173	1	Intergenic	novelGene_7192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGTAAAAGGGCT	NA	False	NA	NA	False	NA	NA	NA	95211956	95212129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95212000_95212100
Isoform_123566_7	chr3	-	156	1	Intergenic	novelGene_7193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATTAATTAA	1637	False	NA	NA	False	NA	NA	NA	95239533	95239377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_95239400_95239500
Isoform_123568_33	chr3	-	175	1	Intergenic	novelGene_7194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAGTAGTA	NA	False	NA	NA	False	NA	NA	NA	95255938	95255763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_95255800_95255900
Isoform_123570_3	chr3	+	262	1	Intergenic	novelGene_7195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCAGTTAAAGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	95259147	95259409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95259100_95259400
Isoform_123571_18	chr3	-	176	1	Intergenic	novelGene_7196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	4618	False	NA	NA	False	NA	NA	NA	95352612	95352436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_95352400_95352600
Isoform_123572_3	chr3	+	2780	1	Intergenic	novelGene_6926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTCTCAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	19217466	19220246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_19217500_19220200
Isoform_123574_10	chr3	-	177	1	Intergenic	novelGene_7197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTATTCCTA	2374	False	NA	NA	False	NA	NA	NA	95400449	95400272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_95400300_95400400
Isoform_123576_16	chr3	+	171	1	Intergenic	novelGene_7198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	95464442	95464613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95464400_95464600
Isoform_123577_142	chr3	+	176	1	Intergenic	novelGene_7200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTAAAAATCACATT	747	False	NA	1	True	NA	NA	NA	95481990	95482166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95482000_95482200
Isoform_123578_11	chr3	-	176	1	Intergenic	novelGene_7201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTTGTTAATA	NA	False	NA	NA	False	NA	NA	NA	95495378	95495202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_95495200_95495400
Isoform_123581_9	chr3	+	979	1	FSM	ENSMUSG00000038619.13	ENSMUST00000199421.2	998	1	20	-1	2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAATATAAAAATAAAAAC	402	False	NA	NA	False	NA	NA	NA	95532323	95533302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95532300_95533300
Isoform_123585_7	chr3	+	169	1	FSM	ENSMUSG00000106383.2	ENSMUST00000200640.2	1742	1	455	1118	455	-1118	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGACATACTG	270	False	NA	NA	False	NA	NA	NA	95547069	95547238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_95547100_95547200
Isoform_123615_3	chr3	-	2733	1	Intergenic	novelGene_7202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95630780	95628047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_95628000_95630800
Isoform_123616_189	chr3	+	178	1	Intergenic	novelGene_6910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	6048486	6048664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_6048500_6048700
Isoform_123618_3	chr3	-	2662	1	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	55624	6	13750	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTGACATTTTTCTTT	3823	False	NA	-1	True	AATAAA	-14	NA	95670320	95667658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_95667700_95670300
Isoform_123620_4	chr3	+	175	1	Intergenic	novelGene_7203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAATAAACCA	NA	False	NA	NA	False	NA	NA	NA	95703311	95703486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95703300_95703500
Isoform_123621_3	chr3	-	285	1	Intergenic	novelGene_7204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5506	False	NA	NA	False	NA	NA	NA	95705191	95704906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_95704900_95705200
Isoform_123623_88	chr13	+	176	1	Intergenic	novelGene_2919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAGATCAT	NA	False	NA	NA	False	NA	NA	NA	12296905	12297081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_12296900_12297100
Isoform_123624_89	chr3	+	177	1	Intergenic	novelGene_7205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95730868	95731045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95730900_95731000
Isoform_123628_8	chr3	+	172	1	Intergenic	novelGene_7206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTACTGCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	95765808	95765980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95765800_95766000
Isoform_123629_5	chr3	-	1586	1	NIC	ENSMUSG00000054312.7	novel	488	3	NA	NA	45	-7005	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95778786	95777200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_95777200_95778800
Isoform_12363_8	chr11	-	1794	7	NIC	ENSMUSG00000042032.14	novel	1949	7	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	215.301081176002	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGCTTTATTTTGT	NA	False	NA	-13	True	AATAAA	-17	NA	40583475	40570141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576141_40578427_40578623_40583304
Isoform_123630_332	chr3	+	206	1	Intergenic	novelGene_7207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGCTCATGTGT	NA	False	NA	NA	False	NA	NA	NA	95781325	95781531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95781300_95781500
Isoform_123632_6	chr3	+	180	1	Intergenic	novelGene_7208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	95785610	95785790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95785600_95785800
Isoform_123633_54	chr3	-	183	1	ISM	ENSMUSG00000038543.14	ENSMUST00000090476.10	809	6	7846	23	7771	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAAATTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	95791471	95791288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_95791300_95791500
Isoform_123634_8	chr3	+	175	1	Intergenic	novelGene_7209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAACAAAAAG	1985	False	NA	NA	False	NA	NA	NA	95821305	95821480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95821300_95821500
Isoform_123635_66	chr3	+	173	1	Intergenic	novelGene_7210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	95832228	95832401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95832200_95832400
Isoform_123661_4	chr3	+	4884	1	ISM	ENSMUSG00000038495.15	ENSMUST00000090785.9	8101	13	51719	5	5537	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATTTTGTATTTCATTT	NA	False	NA	7	True	AATAAA	-17	NA	96063557	96068441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_96063600_96068400
Isoform_123663_5	chr3	-	1556	1	Genic_Genomic	ENSMUSG00000097204.3	novel	NA	NA	NA	NA	-15	499	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCCGGCTATTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	96079747	96078191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_-_96078200_96079700
Isoform_123664_5	chr3	-	160	1	Intergenic	novelGene_7211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	96083159	96082999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96083000_96083200
Isoform_123665_3	chr3	-	1023	1	Genic_Genomic	ENSMUSG00000015943.12	novel	NA	NA	NA	NA	-23	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACGGTGCTCTTAATACC	NA	False	NA	NA	False	AATAAA	-22	NA	96104925	96103902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_-_96103900_96104900
Isoform_123666_16	chr3	-	792	1	NIC	ENSMUSG00000015943.12	novel	995	4	NA	NA	-5	63	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTATTCCTTGATTTG	NA	False	NA	-7	True	AATAAA	-15	NA	96104907	96104115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_96104100_96104900
Isoform_123668_11	chr3	+	200	1	Intergenic	novelGene_7212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATCCCATCATCCAAGC	NA	False	NA	NA	False	NA	NA	NA	96123314	96123514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_96123300_96123500
Isoform_123669_31	chr3	-	456	1	FSM	ENSMUSG00000068855.4	ENSMUST00000090782.4	520	1	-13	77	-13	-77	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTCTTTTTAGAGCC	NA	False	NA	-23	True	NA	NA	NA	96128209	96127753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96127800_96128200
Isoform_12367_150	chr11	-	1809	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	139	1	-7	-1	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGCTTTATTTTGT	NA	False	NA	-13	True	AATAAA	-17	NA	40583462	40570141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
Isoform_123671_4	chr3	+	578	1	FSM	ENSMUSG00000064220.7	ENSMUST00000078756.7	586	1	41	-33	41	33	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAGAGTGTCGTGTC	NA	False	NA	NA	False	NA	NA	NA	96152853	96153431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96152900_96153400
Isoform_123672_15	chr3	-	515	1	FSM	ENSMUSG00000063954.8	ENSMUST00000074976.8	528	1	-17	30	-17	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAATCAGATAAAGAGTTG	NA	False	NA	NA	False	AAAAAG	-21	NA	96147609	96147094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96147100_96147600
Isoform_123674_14	chr3	+	475	1	FSM	ENSMUSG00000074403.3	ENSMUST00000098843.3	488	1	27	-14	27	14	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGTCGATGAAAGTAGCT	2007	False	NA	NA	False	NA	NA	NA	96175996	96176471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96176000_96176500
Isoform_123675_6	chr3	+	495	1	FSM	ENSMUSG00000105827.2	ENSMUST00000177113.2	381	1	-52	-62	-52	62	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCAAAAAAAGACTGTAAG	3026	False	NA	NA	False	NA	NA	NA	96177015	96177510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96177000_96177500
Isoform_123677_18	chr3	-	180	1	Intergenic	novelGene_7213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAAAAGGGAAATTAGCA	2054	False	NA	NA	False	NA	NA	NA	96196418	96196238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96196200_96196400
Isoform_123678_34	chr16	+	168	1	Intergenic	novelGene_4458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31121653	31121821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_31121700_31121800
Isoform_123679_11	chr3	+	199	1	Intergenic	novelGene_7214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGGGTGTGTGTCAGAG	NA	False	NA	NA	False	NA	NA	NA	96217222	96217421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_96217200_96217400
Isoform_123682_289	chr3	+	209	1	Intergenic	novelGene_7216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAGAATGGAATCTAC	1787	False	NA	NA	False	NA	NA	NA	96249639	96249848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_96249600_96249800
Isoform_123684_9	chr3	+	347	1	Intergenic	novelGene_7217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTAAGTGGCCTC	NA	False	NA	NA	False	NA	NA	NA	96312618	96312965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_96312600_96313000
Isoform_123687_7	chr3	-	401	1	FSM	ENSMUSG00000118406.2	ENSMUST00000238714.2	397	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGCTGGGGAAATGCCC	NA	False	NA	NA	False	NA	NA	NA	96322149	96321748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96321700_96322100
Isoform_123688_22	chr3	-	180	1	Intergenic	novelGene_6911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	6641473	6641293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_6641300_6641500
Isoform_123689_13	chr3	-	378	1	FSM	ENSMUSG00000118677.1	ENSMUST00000240510.1	166	1	0	-212	0	212	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	AAAAAG	-43	NA	96367505	96367127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96367100_96367500
Isoform_123691_20	chr3	+	377	1	FSM	ENSMUSG00000119774.1	ENSMUST00000083839.3	166	1	0	-211	0	211	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	ATTAAA	-45	NA	96357761	96358138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_96357800_96358100
Isoform_123692_9	chr3	+	173	1	Intergenic	novelGene_7218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAGATAGATAGATAGAT	1869	False	NA	NA	False	NA	NA	NA	96375889	96376062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_96375900_96376100
Isoform_123693_8	chr3	+	2886	1	Intergenic	novelGene_6928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19346635	19349521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_19346600_19349500
Isoform_123694_345	chr3	-	197	1	Intergenic	novelGene_7219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTTAGTTAGGATAGA	NA	False	NA	-7	True	NA	NA	NA	96442613	96442416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96442400_96442600
Isoform_123707_42	chr3	+	204	1	Intergenic	novelGene_7220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAGAAAAAGA	9470	False	NA	NA	False	NA	NA	NA	96498195	96498399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_96498200_96498400
Isoform_123708_4	chr3	-	197	1	Intergenic	novelGene_7221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAAACTCAAACCAG	NA	False	NA	NA	False	NA	NA	NA	96513490	96513293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96513300_96513500
Isoform_123714_23	chr3	-	175	1	Intergenic	novelGene_7222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGCA	9467	False	NA	NA	False	NA	NA	NA	96584685	96584510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96584500_96584700
Isoform_123715_111	chr3	+	173	1	Intergenic	novelGene_7223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTTAATAG	NA	False	NA	NA	False	NA	NA	NA	96593602	96593775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_96593600_96593800
Isoform_123716_10	chr3	-	2940	1	FSM	ENSMUSG00000104795.2	ENSMUST00000197075.2	795	1	-2144	-1	-2144	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96634780	96631840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_96631800_96634800
Isoform_123719_4	chr3	-	175	1	Intergenic	novelGene_7224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGAATTGCT	8956	False	NA	NA	False	NA	NA	NA	96658072	96657897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96657900_96658100
Isoform_123720_5	chr3	-	212	1	Intergenic	novelGene_6929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGGTTCTGAAGCGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	19682200	19681988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_19682000_19682200
Isoform_123721_19	chr3	-	177	1	Intergenic	novelGene_7225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTATTCCACA	NA	False	NA	NA	False	NA	NA	NA	96690911	96690734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96690700_96690900
Isoform_123723_15	chr3	-	224	1	Intergenic	novelGene_7226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGCTAATGTCACAC	NA	False	NA	NA	False	NA	NA	NA	96746410	96746186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96746200_96746400
Isoform_123725_5	chr3	-	2861	1	NIC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	13	-19954	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1876	False	NA	NA	False	NA	NA	NA	96812649	96809788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_96809800_96812600
Isoform_123726_24	chr3	-	177	1	Intergenic	novelGene_7227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	96849300	96849123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96849100_96849300
Isoform_123727_7	chr3	-	175	1	Intergenic	novelGene_7228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATATATATGAAGT	NA	False	NA	NA	False	NA	NA	NA	96892432	96892257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_96892300_96892400
Isoform_12373_13	chr11	-	1168	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	262	623	46	-623	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTGACACATGATCC	NA	False	NA	NA	False	AATAAA	-26	NA	40585768	40570763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
Isoform_123731_34	chr3	+	181	1	FSM	ENSMUSG00000028093.16	ENSMUST00000198329.2	3291	1	115	2995	115	406	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	97081439	97081620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_97081400_97081600
Isoform_123736_3	chr3	+	2897	1	Intergenic	novelGene_6930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTTAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19868188	19871085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_19868200_19871100
Isoform_123737_4	chr3	+	4255	1	Antisense	novelGene_ENSMUSG00000028089.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATCAGGGGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	97464772	97469027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_97464800_97469000
Isoform_123738_6	chr3	+	4983	1	NIC	ENSMUSG00000038205.13	novel	1878	7	NA	NA	100	-7503	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97565629	97570612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_97565600_97570600
Isoform_123739_23	chr3	-	178	1	Intergenic	novelGene_6931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	19908772	19908594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_19908600_19908800
Isoform_123740_12	chr3	+	180	1	Intergenic	novelGene_7229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGGCTACTTTATCC	9333	False	NA	NA	False	NA	NA	NA	97667955	97668135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_97668000_97668100
Isoform_123741_4	chr3	-	5186	1	NIC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	34	-16097	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTTTCTCTGGATAAT	NA	False	NA	NA	False	AATAAA	-21	NA	97675291	97670105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_97670100_97675300
Isoform_123746_46	chr3	-	183	1	Intergenic	novelGene_7230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGGAGGAG	NA	False	NA	0	True	NA	NA	NA	97905521	97905338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_97905300_97905500
Isoform_123748_90	chr3	-	181	1	Intergenic	novelGene_7231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGGTGAACTTC	NA	False	NA	-7	True	NA	NA	NA	97957572	97957391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_97957400_97957600
Isoform_123749_4	chr3	+	176	1	Intergenic	novelGene_6932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAACCTCATTT	NA	False	NA	NA	False	NA	NA	NA	19946197	19946373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_19946200_19946400
Isoform_12375_4	chr11	-	1933	8	NNC	ENSMUSG00000042032.14	novel	1949	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	250.632261714738	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGCTTTATTTTGT	NA	False	NA	-13	True	AATAAA	-17	NA	40583453	40570141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40578850_40578984_40583304
Isoform_123752_8	chr3	+	2341	1	FSM	ENSMUSG00000048106.7	ENSMUST00000059704.6	1028	1	-104	-1209	-8	1209	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTTGTGCTCAATGTA	NA	False	NA	NA	False	NA	NA	NA	19949041	19951382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_19949000_19951400
Isoform_123753_6	chr3	+	4109	1	FSM	ENSMUSG00000048106.7	ENSMUST00000198527.3	6148	1	-9	2048	-9	-2048	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGGTCTATCGTGAGT	NA	False	NA	NA	False	NA	NA	NA	19949040	19953149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_19949000_19953100
Isoform_123754_3	chr3	+	1492	2	Genic_Genomic	ENSMUSG00000048106.7	novel	6148	1	NA	NA	24	412	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGGTGTTAATTTTAA	NA	False	NA	NA	False	TATAAA	-11	NA	19949073	19950585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_+_19950216_19950235
Isoform_123756_3	chr3	+	182	1	Intergenic	novelGene_7232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	952	False	NA	NA	False	NA	NA	NA	98292243	98292425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_98292200_98292400
Isoform_123757_4	chr3	-	158	1	Intergenic	novelGene_7233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGTTTGAATGTGTCT	9213	False	NA	-1	True	AATAAA	-16	NA	98326441	98326283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_98326300_98326400
Isoform_123758_11	chr3	-	232	1	Intergenic	novelGene_7234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCCCCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98993476	98993244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_98993200_98993500
Isoform_12376_4	chr11	-	4074	6	NIC	ENSMUSG00000042032.14	novel	1949	7	NA	NA	-17	-5	intron_retention	FALSE	canonical	3	244	junction_5	131.001679378548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACACTTTGGCTTTATT	NA	False	NA	-17	True	AATAAA	-13	NA	40583472	40570145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40578623_40583304
Isoform_123762_194	chr3	+	171	1	Intergenic	novelGene_7235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAATAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100575623	100575794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_100575600_100575800
Isoform_123764_6	chr3	-	181	1	Intergenic	novelGene_7236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100745687	100745506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_100745500_100745700
Isoform_123765_237	chr15	-	176	1	Intergenic	novelGene_3854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAATTTGA	NA	False	NA	NA	False	NA	NA	NA	39162775	39162599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_39162600_39162800
Isoform_123768_29	chr3	-	176	1	Intergenic	novelGene_7238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAATCACATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	100862240	100862064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_100862100_100862200
Isoform_123773_6	chr3	-	1174	2	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	31867	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATCAGACTTGTGTGA	NA	False	NA	-10	True	ATTAAA	-11	NA	100948898	100947554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_100948556_100948725
Isoform_123781_4	chr3	+	3516	1	Intergenic	novelGene_7239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101010156	101013672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_101010200_101013700
Isoform_123784_3	chr3	+	188	1	Intergenic	novelGene_6933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGCTAAGAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	20075845	20076033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_20075800_20076000
Isoform_123788_16	chr14	+	158	1	Intergenic	novelGene_3429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	9235	False	NA	NA	False	NA	NA	NA	27048306	27048464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_27048300_27048500
Isoform_123791_32	chr3	-	176	1	Intergenic	novelGene_7016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	60162459	60162283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_60162300_60162500
Isoform_123792_21	chr3	-	2602	1	Intergenic	novelGene_7242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102060381	102057779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_102057800_102060400
Isoform_123795_21	chr3	+	175	1	Intergenic	novelGene_7243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102908741	102908916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_102908700_102908900
Isoform_123796_3	chr3	+	3622	1	ISM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	9127	3	8107	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTGTGGAAACCGTGG	NA	False	NA	6	True	NA	NA	NA	102912150	102915772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_102912200_102915800
Isoform_123797_354	chr3	-	177	1	Intergenic	novelGene_7244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102953789	102953612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_102953600_102953800
Isoform_123819_22	chr3	-	284	1	Intergenic	novelGene_7245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAGGAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	102994141	102993857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_102993900_102994100
Isoform_123821_7	chr3	-	2311	1	Intergenic	novelGene_7246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGAAGGAAGGAA	9074	False	NA	NA	False	AAAAAG	-45	NA	103030940	103028629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_103028600_103030900
Isoform_123822_17	chr3	-	158	1	Intergenic	novelGene_6934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2038	False	NA	NA	False	NA	NA	NA	20130476	20130318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_20130300_20130500
Isoform_12383_578	chr11	-	3876	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	16	0	10	0	multi-exon	TRUE	canonical	3	534	junction_10	59.4855104336938	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624233	40592221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
Isoform_123830_6	chr3	+	203	1	Genic_Genomic	ENSMUSG00000005687.15	novel	NA	NA	NA	NA	7192	13	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGGTGTGGGTATA	NA	False	NA	NA	False	NA	NA	NA	103086292	103086495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_+_103086300_103086500
Isoform_123831_9	chr3	-	177	1	Intergenic	novelGene_7247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAGAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	103092081	103091904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_103091900_103092100
Isoform_123833_21	chr3	+	177	1	Intergenic	novelGene_7248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	7218	False	NA	NA	False	NA	NA	NA	103097453	103097630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_103097500_103097600
Isoform_123834_21	chr3	-	177	1	Intergenic	novelGene_7249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGGAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103142741	103142564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_103142600_103142700
Isoform_123835_6	chr3	-	188	1	Intergenic	novelGene_7250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCTTTGAACTCTTCA	NA	False	NA	NA	False	NA	NA	NA	103172923	103172735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_103172700_103172900
Isoform_123836_12	chr3	-	176	1	Intergenic	novelGene_7251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATACATACAG	NA	False	NA	NA	False	NA	NA	NA	103181504	103181328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_103181300_103181500
Isoform_123839_72	chr3	-	205	1	Intergenic	novelGene_7252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAAAGACTCA	NA	False	NA	NA	False	NA	NA	NA	103193732	103193527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_103193500_103193700
Isoform_12384_95	chr11	-	3917	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	-25	0	-25	0	multi-exon	FALSE	canonical	3	534	junction_10	59.4855104336938	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624274	40592221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
Isoform_123844_6	chr3	+	172	1	Intergenic	novelGene_7253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	103306314	103306486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_103306300_103306500
Isoform_123850_3	chr3	+	176	1	Intergenic	novelGene_7254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTTAT	NA	False	NA	NA	False	NA	NA	NA	103672592	103672768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_103672600_103672800
Isoform_123851_7	chr3	+	172	1	Intergenic	novelGene_7255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGGAGGAGATGGAAA	NA	False	NA	NA	False	NA	NA	NA	103699532	103699704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_103699500_103699700
Isoform_123852_6	chr3	+	160	1	Antisense	novelGene_ENSMUSG00000027845.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACATTACTTAAAATT	NA	False	NA	NA	False	NA	NA	NA	103708248	103708408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_103708200_103708400
Isoform_123853_7	chr3	-	234	1	Intergenic	novelGene_7256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACTTAGTAATCTTTTG	NA	False	NA	NA	False	NA	NA	NA	103723265	103723031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_103723000_103723300
Isoform_123862_14	chr3	+	1663	1	Intergenic	novelGene_7257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7693	False	NA	NA	False	NA	NA	NA	103976338	103978001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_103976300_103978000
Isoform_123864_18	chr1	-	198	1	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAAAAGTTCAACGTCT	NA	False	NA	NA	False	NA	NA	NA	80413637	80413439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_80413400_80413600
Isoform_123866_6	chr3	+	179	1	Intergenic	novelGene_7258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAATTCAGTAAGATG	NA	False	NA	NA	False	NA	NA	NA	104434598	104434777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_104434600_104434800
Isoform_123881_5	chr3	-	188	1	Intergenic	novelGene_7259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATGGC	NA	False	NA	NA	False	NA	NA	NA	104673085	104672897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_104672900_104673100
Isoform_123882_13	chr3	+	177	1	Intergenic	novelGene_6935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	21820113	21820290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_21820100_21820300
Isoform_123890_98	chr3	-	176	1	Intergenic	novelGene_7260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	6553	False	NA	NA	False	NA	NA	NA	104774441	104774265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_104774300_104774400
Isoform_123891_7	chr3	-	4744	1	Antisense	novelGene_ENSMUSG00000045576.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACTAAAAACATAAT	3808	False	NA	NA	False	NA	NA	NA	104790649	104785905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_104785900_104790600
Isoform_123892_40	chr3	-	238	1	Intergenic	novelGene_7261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTACCAAAGAGGCC	NA	False	NA	NA	False	NA	NA	NA	105430418	105430180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_105430200_105430400
Isoform_123896_6	chr3	+	259	1	Antisense	novelGene_ENSMUSG00000027905.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAATTCCTTTAAATCT	NA	False	NA	NA	False	TATAAA	-18	NA	105589148	105589407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_105589100_105589400
Isoform_123905_159	chr3	+	418	1	FSM	ENSMUSG00000092072.4	ENSMUST00000170669.4	429	1	1	10	1	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATACAAGTTATTATTT	NA	False	NA	NA	False	AATAAA	-40	NA	105941980	105942398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_105942000_105942400
Isoform_123906_3	chr3	-	186	1	Intergenic	novelGene_7262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCTTCAAGTTTAAAATA	3452	False	NA	NA	False	NA	NA	NA	106216028	106215842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_106215800_106216000
Isoform_123909_8	chr3	+	3193	1	NIC	ENSMUSG00000087260.6	novel	881	4	NA	NA	6	-1882	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAACAGTAAAAACA	3157	False	NA	NA	False	ATTAAA	-30	NA	107186320	107189513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_107186300_107189500
Isoform_123910_24	chr3	+	176	1	Intergenic	novelGene_7263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	14	True	NA	NA	False	NA	NA	NA	107211370	107211546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_107211400_107211500
Isoform_123911_4	chr3	+	174	1	Intergenic	novelGene_7264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACCTTAACACACCAA	447	False	NA	NA	False	NA	NA	NA	107231059	107231233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_107231100_107231200
Isoform_123912_23	chr3	-	7106	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	51	-1190	51	-524	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTTCTGCCTGGA	NA	False	NA	-9	True	AATAAA	-16	NA	107240366	107233260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_107233300_107240400
Isoform_123915_76	chr3	-	211	1	Intergenic	novelGene_7265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCCAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	107254866	107254655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_107254700_107254900
Isoform_123917_6	chr3	-	193	1	Intergenic	novelGene_7266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGAAAGAGATGTTA	NA	False	NA	NA	False	NA	NA	NA	107482485	107482292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_107482300_107482500
Isoform_123919_19	chr3	-	2396	1	Genic_Genomic	ENSMUSG00000014601.14	novel	NA	NA	NA	NA	-3	-8850	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGTCTTA	NA	False	NA	NA	False	AATATA	-26	NA	107539013	107536617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_-_107536600_107539000
Isoform_123920_4	chr3	-	185	1	Intergenic	novelGene_7267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGACTCAGAGCTAAACA	8121	False	NA	NA	False	NA	NA	NA	107546953	107546768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_107546800_107547000
Isoform_123924_14	chr3	+	178	1	Intergenic	novelGene_7268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTCTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	107721505	107721683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_107721500_107721700
Isoform_123925_4	chr3	+	178	1	Intergenic	novelGene_7269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAATAAGAC	NA	False	NA	NA	False	NA	NA	NA	107778430	107778608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_107778400_107778600
Isoform_123928_13	chr3	+	166	1	Intergenic	novelGene_7270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	108029145	108029311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_108029100_108029300
Isoform_123930_5	chr3	+	5428	1	NIC	ENSMUSG00000050947.10	novel	5030	2	NA	NA	4	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTGGCACAGTTTGTG	540	False	NA	8	True	ATTAAA	-15	NA	108093654	108099082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_108093700_108099100
Isoform_123932_52	chr3	-	175	1	Intergenic	novelGene_7271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	108163670	108163495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_108163500_108163700
Isoform_123933_5	chr3	-	178	1	Intergenic	novelGene_7272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAGTTAAAAAAAA	2451	False	NA	NA	False	NA	NA	NA	108224189	108224011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_108224000_108224200
Isoform_123937_10	chr3	+	4827	1	Antisense	novelGene_ENSMUSG00000068739.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108342175	108347002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_108342200_108347000
Isoform_123942_6	chr3	-	1836	1	FSM	ENSMUSG00000106019.2	ENSMUST00000199072.2	1731	1	-104	-1	-104	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTTGTTGTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	22130410	22128574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_22128600_22130400
Isoform_123944_7	chr3	-	192	1	Intergenic	novelGene_7273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGTGTGTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	108503039	108502847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_108502800_108503000
Isoform_123945_12	chr3	-	177	1	Intergenic	novelGene_7274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATAACAGCACTC	NA	False	NA	NA	False	NA	NA	NA	108506946	108506769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_108506800_108506900
Isoform_123946_45	chr3	-	184	1	Intergenic	novelGene_7275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTGTGATCACAG	5202	False	NA	NA	False	NA	NA	NA	108557229	108557045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_108557000_108557200
Isoform_123948_19	chr3	-	178	1	Intergenic	novelGene_7276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAAACC	NA	False	NA	NA	False	NA	NA	NA	108660434	108660256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_108660300_108660400
Isoform_123949_10	chr3	-	194	1	Intergenic	novelGene_7277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAAATGA	6723	False	NA	NA	False	NA	NA	NA	108697774	108697580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_108697600_108697800
Isoform_123957_30	chr3	-	2553	1	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	5	-2606	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTATAAAGTA	6855	False	NA	NA	False	NA	NA	NA	108819038	108816485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_108816500_108819000
Isoform_123960_5	chr3	-	177	1	Intergenic	novelGene_7279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGAACTAGCACTC	8021	False	NA	NA	False	NA	NA	NA	108837042	108836865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_108836900_108837000
Isoform_123961_87	chr3	-	2438	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	8	4	3	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAATTTGCTGGGGCTC	NA	False	NA	-16	True	ATTAAA	-15	NA	110158306	110155868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_110155900_110158300
Isoform_123963_132	chr3	-	2178	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	8	264	3	-264	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGAGGTCTTTAGACGT	NA	False	NA	-14	True	AATAAA	-20	NA	110158306	110156128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_110156100_110158300
Isoform_123969_23	chr3	+	156	1	FSM	ENSMUSG00000105509.2	ENSMUST00000197569.2	3692	1	1577	1959	1577	-1959	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCACTCGGTTCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	110158907	110159063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_110158900_110159100
Isoform_123970_6	chr3	-	163	1	Intergenic	novelGene_7280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCTTAAAAAAATCATATAA	NA	False	NA	NA	False	NA	NA	NA	111283124	111282961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_111283000_111283100
Isoform_123971_15	chr3	-	179	1	Intergenic	novelGene_7281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCACCCACTGC	NA	False	NA	NA	False	NA	NA	NA	111372898	111372719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_111372700_111372900
Isoform_123973_5	chr3	+	174	1	Intergenic	novelGene_7282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	112847821	112847995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_112847800_112848000
Isoform_123974_4	chr3	+	834	1	Antisense	novelGene_ENSMUSG00000027981.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGATGTAAGTTCTC	NA	False	NA	NA	False	AGTAAA	-26	NA	113423503	113424337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_113423500_113424300
Isoform_123975_10	chr3	-	177	1	Intergenic	novelGene_7283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114602864	114602687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_114602700_114602900
Isoform_123977_38	chr3	-	165	1	Intergenic	novelGene_7284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAAATACAAA	NA	False	NA	NA	False	NA	NA	NA	115087731	115087566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_115087600_115087700
Isoform_123978_38	chr3	+	194	1	Intergenic	novelGene_7285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGCCAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	115495520	115495714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_115495500_115495700
Isoform_123980_5	chr3	-	161	1	Intergenic	novelGene_6936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACACTCATGG	NA	False	NA	NA	False	NA	NA	NA	22155942	22155781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_22155800_22155900
Isoform_123982_6	chr3	-	955	1	FSM	ENSMUSG00000054426.12	ENSMUST00000067500.6	309	1	33	-679	0	679	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAGAAAA	941	False	NA	NA	False	NA	NA	NA	115681746	115680791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_115680800_115681700
Isoform_123983_24	chr3	+	177	1	Intergenic	novelGene_7286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAAATCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	116302538	116302715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_116302500_116302700
Isoform_123985_10	chr3	-	916	1	FSM	ENSMUSG00000034437.9	ENSMUST00000075650.7	492	1	-116	-308	-116	308	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	116355191	116354275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116354300_116355200
Isoform_123989_14	chr3	+	156	1	Antisense	novelGene_ENSMUSG00000106025.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATCTTGAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	116367458	116367614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_116367500_116367600
Isoform_123990_43	chr3	+	184	1	Intergenic	novelGene_7287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCTGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	116373875	116374059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_116373900_116374100
Isoform_123991_8	chr3	-	716	1	FSM	ENSMUSG00000033439.13	ENSMUST00000198454.2	880	1	-24	188	-2	-188	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	116388511	116387795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_116387800_116388500
Isoform_123992_23	chr3	-	182	1	Intergenic	novelGene_7288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAGAAGTTAAAATAT	NA	False	NA	NA	False	NA	NA	NA	116396508	116396326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_116396300_116396500
Isoform_123993_8	chr3	-	219	1	Intergenic	novelGene_7289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTTTCTAATAAAACAGT	NA	False	NA	NA	False	AAAAAG	-23	NA	116400273	116400054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_116400100_116400300
Isoform_123996_3	chr3	+	3265	1	Intergenic	novelGene_7290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGCTCCTTAATTATCT	NA	False	NA	NA	False	NA	NA	NA	116451490	116454755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_116451500_116454800
Isoform_123997_163	chr19	-	177	1	Intergenic	novelGene_5710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	23770789	23770612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_23770600_23770800
Isoform_123998_97	chr7	+	178	1	Intergenic	novelGene_9976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	34055960	34056138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_34056000_34056100
Isoform_124000_15	chr3	-	4403	2	Antisense	novelGene_ENSMUSG00000027630.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22259324	22254900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_22257088_22257108
Isoform_124001_8	chr3	-	8286	2	Antisense	novelGene_ENSMUSG00000027630.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22263210	22254903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_22257088_22257108
Isoform_124002_5	chr3	-	1094	1	Intergenic	novelGene_7293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5085	False	NA	NA	False	NA	NA	NA	116657563	116656469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_116656500_116657600
Isoform_124003_3	chr3	-	210	1	Intergenic	novelGene_7294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAACAGGCAGGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	116688728	116688518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_116688500_116688700
Isoform_124004_4	chr3	+	3104	1	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	26380	467	7897	-467	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCCTTGTAGCACTGTTC	NA	False	NA	13	True	AATAAA	-21	NA	116698255	116701359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_116698300_116701400
Isoform_124005_4	chr3	+	2977	1	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	26511	463	8028	-463	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTAGCACTGTTCCTAT	NA	False	NA	17	True	AATAAA	-25	NA	116698386	116701363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_116698400_116701400
Isoform_124006_6	chr3	+	2726	1	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	26761	464	8278	-464	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTAGCACTGTTCCTA	NA	False	NA	16	True	AATAAA	-24	NA	116698636	116701362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_116698600_116701400
Isoform_124010_6	chr3	+	2192	1	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	27296	463	8813	-463	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTAGCACTGTTCCTAT	NA	False	NA	17	True	AATAAA	-25	NA	116699171	116701363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_116699200_116701400
Isoform_124013_5	chr3	-	2758	1	Intergenic	novelGene_7295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7363	False	NA	NA	False	ATTAAA	-12	NA	116705346	116702588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_116702600_116705300
Isoform_124035_11	chr3	-	176	1	Intergenic	novelGene_7296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTGAGTGACTT	NA	False	NA	NA	False	NA	NA	NA	117298685	117298509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_117298500_117298700
Isoform_124036_14	chr3	-	177	1	Intergenic	novelGene_7297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAGAAAGATGGA	NA	False	NA	NA	False	NA	NA	NA	118291027	118290850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_118290800_118291000
Isoform_124038_13	chr3	+	329	1	FSM	ENSMUSG00000106037.2	ENSMUST00000196114.2	346	1	83	-66	83	66	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGTACCCTTCAAAATAG	NA	False	NA	58	True	NA	NA	NA	119503247	119503576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_119503200_119503600
Isoform_124040_172	chr3	+	171	1	Intergenic	novelGene_7298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	119673629	119673800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_119673600_119673800
Isoform_124041_3	chr3	-	2524	1	NIC	ENSMUSG00000028133.18	novel	1484	5	NA	NA	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAGAAAAAAAAAAAACAAA	NA	False	NA	NA	False	GGGGCT	-41	NA	120965343	120962819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_120962800_120965300
Isoform_124042_24	chr3	-	176	1	Intergenic	novelGene_7299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAGTACATTAAA	NA	False	NA	NA	False	NA	NA	NA	121006104	121005928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_121005900_121006100
Isoform_124043_180	chr8	+	209	1	Intergenic	novelGene_10905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAGGCCATCAAGCTTG	NA	False	NA	NA	False	NA	NA	NA	108317905	108318114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_108317900_108318100
Isoform_124046_11	chr3	+	208	1	Intergenic	novelGene_7300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGCATATCTACCTTG	NA	False	NA	NA	False	NA	NA	NA	121178272	121178480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_121178300_121178500
Isoform_124047_5	chr3	-	152	1	Intergenic	novelGene_7301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	121209867	121209715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_121209700_121209900
Isoform_12405_1215	chr11	-	3469	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	42	1	42	-1	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	1215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCTTGTTTTGGTTTC	NA	False	NA	-6	True	AATAAA	-15	NA	40646096	40639379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
Isoform_124059_6	chr3	-	464	1	Antisense	novelGene_ENSMUSG00000053931.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTGTAAGTGTAAAAAAAT	NA	False	NA	NA	False	AAAAAG	-40	NA	121251850	121251386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_121251400_121251800
Isoform_124063_9	chr3	+	175	1	Intergenic	novelGene_7302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTTTAAAGGTTTAATA	NA	False	NA	NA	False	NA	NA	NA	121285346	121285521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_121285300_121285500
Isoform_124064_18	chr3	-	166	1	Intergenic	novelGene_7303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATTCTAAATTT	NA	False	NA	NA	False	NA	NA	NA	121332420	121332254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_121332300_121332400
Isoform_124065_3	chr3	-	2001	1	Intergenic	novelGene_7304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	121353186	121351185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_121351200_121353200
Isoform_124068_13	chr3	+	183	1	Intergenic	novelGene_7305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGCTCCTTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	121410657	121410840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_121410700_121410800
Isoform_124072_16	chr3	-	174	1	Intergenic	novelGene_6937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAATGTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	24217139	24216965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_24217000_24217100
Isoform_124073_22	chr3	-	196	1	Intergenic	novelGene_7306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTCAAGTGCATCTGA	2790	False	NA	NA	False	NA	NA	NA	121720612	121720416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_121720400_121720600
Isoform_124074_5	chr2	-	181	1	Intergenic	novelGene_6067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	28686058	28685877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_28685900_28686100
Isoform_124075_8	chr3	+	221	1	Intergenic	novelGene_7307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCCCAACCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	121815719	121815940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_121815700_121815900
Isoform_124076_3198	chr3	+	508	1	FSM	ENSMUSG00000057036.8	ENSMUST00000077389.8	444	1	-24	-40	-24	40	mono-exon	FALSE	NA	NA	NA	NA	NA	3198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	24387207	24387715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_24387200_24387700
Isoform_124083_7	chr3	-	170	1	Intergenic	novelGene_7308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAATAAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	121944377	121944207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_121944200_121944400
Isoform_124085_7	chr3	+	175	1	Intergenic	novelGene_7309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAGTAAACAA	NA	False	NA	NA	False	NA	NA	NA	122015804	122015979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_122015800_122016000
Isoform_124088_4	chr3	-	364	1	Intergenic	novelGene_6938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAACAGGTT	NA	False	NA	NA	False	NA	NA	NA	24411311	24410947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_24410900_24411300
Isoform_124089_34	chr3	+	698	1	FSM	ENSMUSG00000093392.2	ENSMUST00000175860.2	492	1	-4	-202	-4	202	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAGAA	5891	False	NA	NA	False	NA	NA	NA	122050372	122051070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_122050400_122051100
Isoform_124093_8	chr3	+	165	1	Intergenic	novelGene_7310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122117413	122117578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_122117400_122117600
Isoform_124096_15	chr3	+	178	1	Intergenic	novelGene_7311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	122209593	122209771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_122209600_122209800
Isoform_124097_10	chr3	+	207	1	Intergenic	novelGene_7312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTAGATCATGCCAG	65	False	NA	NA	False	NA	NA	NA	122266629	122266836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_122266600_122266800
Isoform_124106_9	chr3	+	173	1	Intergenic	novelGene_7313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAGATAGATAGAT	NA	False	NA	NA	False	NA	NA	NA	122404995	122405168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_122405000_122405200
Isoform_124107_4	chr3	-	3213	2	NNC	ENSMUSG00000106365.2	novel	396	2	NA	NA	-96	686	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATGAAAGAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	122423408	122420173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_-_122422872_122422893
Isoform_124112_5	chr3	-	1009	1	NIC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	7	-15848	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122778146	122777137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_122777100_122778100
Isoform_124114_6	chr3	+	341	1	Intergenic	novelGene_7314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTTAGTATTTGTCAGA	NA	False	NA	37	True	AATAAA	-26	NA	122778330	122778671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_122778300_122778700
Isoform_124115_3	chr3	+	440	1	Intergenic	novelGene_7315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAGGAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	122778359	122778799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_122778400_122778800
Isoform_124117_2317	chr3	-	1968	1	FSM	ENSMUSG00000069083.5	ENSMUST00000091289.5	1590	1	-126	-252	-126	252	mono-exon	FALSE	NA	NA	NA	NA	NA	2317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATGTGATT	NA	False	NA	NA	False	AATAAA	-21	NA	25266895	25264927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_25264900_25266900
Isoform_124129_6	chr3	-	785	1	FSM	ENSMUSG00000104960.2	ENSMUST00000198509.2	776	1	-6	-3	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCCTGTTTCTGGA	NA	False	NA	48	True	AATAAA	-21	NA	123301985	123301200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_123301200_123302000
Isoform_124131_4	chr2	+	175	1	Intergenic	novelGene_6342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	75501973	75502148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_75502000_75502100
Isoform_124132_8	chr3	+	1780	1	FSM	ENSMUSG00000044528.6	ENSMUST00000058994.6	3889	1	220	1889	220	-1889	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACATGTGTGGTGATATT	NA	False	NA	NA	False	ATTAAA	-19	NA	124114723	124116503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_124114700_124116500
Isoform_124137_3	chr3	+	900	1	FSM	ENSMUSG00000096544.3	ENSMUST00000178993.3	331	1	135	-704	135	704	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAACACTCTTTTAGTAT	NA	False	NA	99	True	NA	NA	NA	124179450	124180350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_124179400_124180400
Isoform_124141_14	chr3	+	166	1	Intergenic	novelGene_7317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAACACTCTTTTAGTAT	NA	False	NA	99	True	NA	NA	NA	124180184	124180350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_124180200_124180400
Isoform_124143_5	chr15	+	178	1	Intergenic	novelGene_3983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATAGGTA	8373	False	NA	NA	False	NA	NA	NA	76826660	76826838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76826700_76826800
Isoform_124145_20	chr3	+	844	1	Intergenic	novelGene_6940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATCCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25785927	25786771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_25785900_25786800
Isoform_124146_45	chr3	+	177	1	Intergenic	novelGene_7318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTCAGGATTG	NA	False	NA	NA	False	NA	NA	NA	126664059	126664236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_126664100_126664200
Isoform_124147_4	chr3	+	2893	1	Intergenic	novelGene_7319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCGTCTCAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	127168536	127171429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_127168500_127171400
Isoform_124150_6	chr3	+	173	1	Intergenic	novelGene_7320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	127238644	127238817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_127238600_127238800
Isoform_124151_116	chr3	+	206	1	Intergenic	novelGene_7321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCACCTTGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	127251491	127251697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_127251500_127251700
Isoform_124152_3	chr3	-	237	1	Intergenic	novelGene_7322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCAGCACTCAGGAGGCA	NA	False	NA	NA	False	NA	NA	NA	127352619	127352382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_127352400_127352600
Isoform_124153_39	chr3	-	175	1	Intergenic	novelGene_7323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	127442233	127442058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_127442100_127442200
Isoform_124157_87	chr3	-	176	1	Intergenic	novelGene_7324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTAGT	NA	False	NA	NA	False	NA	NA	NA	127722721	127722545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_127722500_127722700
Isoform_124158_5	chr3	+	157	1	Intergenic	novelGene_7325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	129039985	129040142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_129040000_129040100
Isoform_124159_3	chr3	+	227	1	FSM	ENSMUSG00000106258.2	ENSMUST00000198361.2	776	1	611	-62	611	62	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCTCTCTCCTGGCAGA	NA	False	NA	NA	False	AATATA	-32	NA	129256231	129256458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_129256200_129256500
Isoform_124161_26	chr3	-	233	1	Intergenic	novelGene_7326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATAAGTCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	129296119	129295886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_129295900_129296100
Isoform_124166_4	chr3	-	2540	1	Intergenic	novelGene_7327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTAGTTTTGCTTTCCCCC	NA	False	NA	NA	False	NA	NA	NA	129415286	129412746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_129412700_129415300
Isoform_124212_14	chr3	-	181	1	Intergenic	novelGene_7328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	129453064	129452883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_129452900_129453100
Isoform_124213_30	chr3	+	6938	2	Intergenic	novelGene_7329	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	129460072	129467055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_129465566_129465610
Isoform_124215_26	chr3	-	177	1	Intergenic	novelGene_7330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	129483323	129483146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_129483100_129483300
Isoform_124219_107	chr3	-	171	1	Intergenic	novelGene_7331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTCTTAA	9983	False	NA	-1	True	NA	NA	NA	129668457	129668286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_129668300_129668500
Isoform_124220_4	chr3	-	177	1	Intergenic	novelGene_7332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGCCAAAACTTCA	7713	False	NA	NA	False	NA	NA	NA	129675591	129675414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_129675400_129675600
Isoform_124222_7	chr3	-	176	1	Intergenic	novelGene_7333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	129879955	129879779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_129879800_129880000
Isoform_124228_112	chr3	+	181	1	Intergenic	novelGene_7334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	130529146	130529327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_130529100_130529300
Isoform_124229_13	chr3	-	170	1	Intergenic	novelGene_7335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAACCTCTCCATA	NA	False	NA	NA	False	NA	NA	NA	130673823	130673653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_130673700_130673800
Isoform_124230_5	chr3	+	173	1	Intergenic	novelGene_7336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTCAAAAAAGGAACTGAA	NA	False	NA	NA	False	NA	NA	NA	130816218	130816391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_130816200_130816400
Isoform_124232_4	chr3	+	174	1	Intergenic	novelGene_7337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATCTCATCAATAG	1500	False	NA	NA	False	NA	NA	NA	130875674	130875848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_130875700_130875800
Isoform_124233_3	chr3	-	216	1	Intergenic	novelGene_7338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGGCAAACAGAACT	NA	False	NA	NA	False	NA	NA	NA	130934454	130934238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_130934200_130934500
Isoform_124234_95	chr3	-	177	1	Intergenic	novelGene_7339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGGTTTTATTATAT	NA	False	NA	NA	False	NA	NA	NA	130992205	130992028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_130992000_130992200
Isoform_124235_11	chr3	+	176	1	Intergenic	novelGene_7340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCGAG	NA	False	NA	NA	False	NA	NA	NA	130993046	130993222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_130993000_130993200
Isoform_124238_32	chr3	+	180	1	Antisense	novelGene_ENSMUSG00000027984.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGACTTTCCC	NA	False	NA	NA	False	NA	NA	NA	131040850	131041030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_131040800_131041000
Isoform_12424_4	chr11	-	3480	10	FSM	ENSMUSG00000010803.14	ENSMUST00000020707.12	4688	10	661	547	-106	-547	multi-exon	FALSE	canonical	1	1	junction_3	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCGTGTTGCCGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	42073096	42022312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42072992
Isoform_124240_31	chr3	+	158	1	Antisense	novelGene_ENSMUSG00000106268.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	131078446	131078604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_131078400_131078600
Isoform_124244_14	chr3	+	155	1	Intergenic	novelGene_7341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTGGAACAAAATACAT	NA	False	NA	NA	False	NA	NA	NA	132382129	132382284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_132382100_132382300
Isoform_124245_5	chr3	-	2384	1	Antisense	novelGene_ENSMUSG00000028030.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAACAAAAAACTTCT	NA	False	NA	NA	False	NA	NA	NA	132547416	132545032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_132545000_132547400
Isoform_124246_28	chr3	-	2086	1	Intergenic	novelGene_6941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATTAACT	594	False	NA	NA	False	NA	NA	NA	27239976	27237890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_27237900_27240000
Isoform_124247_31	chr3	-	781	1	Genic_Genomic	ENSMUSG00000028018.16	novel	NA	NA	NA	NA	-7	-9627	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132797593	132796812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_-_132796800_132797600
Isoform_12425_41	chr11	-	750	5	NIC	ENSMUSG00000020415.17	novel	948	5	NA	NA	281	-1	combination_of_known_junctions	FALSE	canonical	3	326	junction_1	4118.28200679604	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGATTGTGAATACTT	NA	False	NA	-32	True	AATAAA	-14	NA	43316509	43311096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_43311236_43311854_43312093_43313719_43313814_43315545_43315725_43316409
Isoform_124277_47	chr3	+	3905	1	Antisense	novelGene_ENSMUSG00000040943.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	133176709	133180614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_133176700_133180600
Isoform_124278_4	chr3	+	175	1	Intergenic	novelGene_7342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATAAATC	NA	False	NA	NA	False	NA	NA	NA	133202020	133202195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_133202000_133202200
Isoform_12428_2822	chr11	-	680	5	FSM	ENSMUSG00000020415.17	ENSMUST00000121638.8	948	5	281	-13	281	3	multi-exon	FALSE	canonical	3	8449	junction_1	727.283129186976	2822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	-23	True	AATAAA	-23	NA	43316509	43311087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409
Isoform_124280_198	chr3	-	177	1	Intergenic	novelGene_6942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTTGTTTTAAAAGC	1904	False	NA	-6	True	NA	NA	NA	27256818	27256641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_27256600_27256800
Isoform_124282_46	chr3	-	2830	1	NIC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	1	-2710	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACATTGTTTCATCTCAT	NA	False	NA	NA	False	NA	NA	NA	133250062	133247232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_133247200_133250100
Isoform_124284_4	chr3	-	175	1	Intergenic	novelGene_7343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	133298964	133298789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_133298800_133299000
Isoform_124285_3	chr3	-	179	1	Intergenic	novelGene_7344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATAGATTTTCTGT	5451	False	NA	NA	False	NA	NA	NA	133328645	133328466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_133328500_133328600
Isoform_124289_10	chr3	-	5033	1	Antisense	novelGene_ENSMUSG00000045328.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134926680	134921647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_134921600_134926700
Isoform_124293_3	chr3	+	1279	1	Antisense	novelGene_ENSMUSG00000028165.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTGTCTCGTTTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	135128937	135130216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_135128900_135130200
Isoform_124295_3	chr3	+	178	1	Antisense	novelGene_ENSMUSG00000105449.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAGTAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135137737	135137915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_135137700_135137900
Isoform_124317_53	chr11	+	182	1	Intergenic	novelGene_1334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATATTGCA	4654	False	NA	NA	False	NA	NA	NA	5633415	5633597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5633400_5633600
Isoform_124318_4	chr3	-	178	1	Antisense	novelGene_ENSMUSG00000039304.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAAGAAATCA	NA	False	NA	NA	False	NA	NA	NA	27392081	27391903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_27391900_27392100
Isoform_124319_70	chr3	-	178	1	Intergenic	novelGene_7345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAATAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	135223565	135223387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_135223400_135223600
Isoform_12432_157	chr11	-	703	6	FSM	ENSMUSG00000020415.17	ENSMUST00000020687.15	741	6	18	20	-6	-1	multi-exon	FALSE	canonical	3	2427	junction_5	2882.94754721622	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGATTGTGAATACTT	NA	False	NA	-32	True	AATAAA	-14	NA	43317060	43311096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
Isoform_124320_11	chr3	-	180	1	Intergenic	novelGene_7346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAATAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	135232860	135232680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_135232700_135232900
Isoform_124321_7	chr3	-	153	1	Intergenic	novelGene_7347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTATAAATAAATAATTCT	NA	False	NA	NA	False	NA	NA	NA	135257414	135257261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_135257300_135257400
Isoform_124322_3	chr3	+	3281	1	Intergenic	novelGene_7348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGCAAAACTCACAGAGAA	2059	False	NA	NA	False	NA	NA	NA	135300995	135304276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_135301000_135304300
Isoform_124325_7	chr3	+	170	1	Intergenic	novelGene_7349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTCGACAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	135474244	135474414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_135474200_135474400
Isoform_124328_19	chr3	-	1267	1	Intergenic	novelGene_7350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTTGCCACTGAAGG	NA	False	NA	NA	False	NA	NA	NA	136429288	136428021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_136428000_136429300
Isoform_124329_3	chr3	+	179	1	Intergenic	novelGene_7351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGCAACTTGAAGA	NA	False	NA	NA	False	NA	NA	NA	137470728	137470907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_137470700_137470900
Isoform_124330_9	chr3	+	157	1	Intergenic	novelGene_7352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	137486474	137486631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_137486500_137486600
Isoform_124331_7	chr3	+	181	1	Intergenic	novelGene_7353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTTAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	137529599	137529780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_137529600_137529800
Isoform_124332_37	chr3	+	175	1	Intergenic	novelGene_7354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAATCTATCTG	NA	False	NA	NA	False	NA	NA	NA	137547694	137547869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_137547700_137547900
Isoform_124346_70	chr3	-	176	1	Intergenic	novelGene_7356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAACCAGG	NA	False	NA	NA	False	NA	NA	NA	137581675	137581499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_137581500_137581700
Isoform_124352_4	chr3	-	176	1	Intergenic	novelGene_7357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCTTAGATTG	NA	False	NA	NA	False	NA	NA	NA	138145432	138145256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_138145300_138145400
Isoform_124354_7	chr1	+	208	1	Intergenic	novelGene_551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAATTATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165093116	165093324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_165093100_165093300
Isoform_124355_8	chr3	-	3076	1	Intergenic	novelGene_7358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	1649	False	NA	NA	False	NA	NA	NA	138492182	138489106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_138489100_138492200
Isoform_124356_16	chr3	+	176	1	Intergenic	novelGene_6943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAATTGCTA	NA	False	NA	NA	False	NA	NA	NA	27703895	27704071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_27703900_27704100
Isoform_124357_21	chr3	-	220	1	Intergenic	novelGene_7359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	138569529	138569309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_138569300_138569500
Isoform_124358_9	chr3	-	168	1	Intergenic	novelGene_7360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAAGAAAAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	138572016	138571848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_138571800_138572000
Isoform_12436_92	chr11	-	1378	4	FSM	ENSMUSG00000020415.17	ENSMUST00000117446.8	1674	4	299	-3	281	3	multi-exon	FALSE	canonical	3	9157	junction_2	511.130337802622	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	-23	True	AATAAA	-23	NA	43316509	43311087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_43312093_43313719_43313814_43315545_43315725_43316409
Isoform_124363_4	chr3	-	155	1	Intergenic	novelGene_7361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	139894360	139894205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_139894200_139894400
Isoform_124364_17	chr3	+	180	1	Intergenic	novelGene_7362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATAGCT	NA	False	NA	NA	False	NA	NA	NA	140464967	140465147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_140465000_140465100
Isoform_124365_72	chr3	-	1597	1	FSM	ENSMUSG00000047674.3	ENSMUST00000057860.3	2352	1	546	209	546	-209	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGTAGATTTTTGATT	NA	False	NA	-3	True	AATAAA	-13	NA	140917570	140915973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_140916000_140917600
Isoform_124368_3	chr3	+	229	1	Intergenic	novelGene_7363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAATATCAAATATCA	NA	False	NA	NA	False	NA	NA	NA	142109000	142109229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_142109000_142109200
Isoform_124369_490	chr3	-	175	1	Intergenic	novelGene_7364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	490	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGATTTAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	142466756	142466581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_142466600_142466800
Isoform_124370_4	chr3	+	179	1	Intergenic	novelGene_7365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAACCTTACATATG	NA	False	NA	NA	False	NA	NA	NA	142477702	142477881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_142477700_142477900
Isoform_124373_5	chr3	+	182	1	Intergenic	novelGene_7366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGCTGGAACCTCAA	NA	False	NA	NA	False	NA	NA	NA	142679324	142679506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_142679300_142679500
Isoform_124374_7	chr3	-	175	1	Intergenic	novelGene_7367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAAACAAGTT	NA	False	NA	NA	False	NA	NA	NA	142729248	142729073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_142729100_142729200
Isoform_124378_8	chr3	-	175	1	Intergenic	novelGene_7368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9232	False	NA	NA	False	NA	NA	NA	144190156	144189981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_144190000_144190200
Isoform_124379_7	chr3	-	2322	1	FSM	ENSMUSG00000040151.10	ENSMUST00000199680.2	2321	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	144275919	144273597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_144273600_144275900
Isoform_124384_5	chr3	-	157	1	Intergenic	novelGene_7369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	144319226	144319069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_144319100_144319200
Isoform_124385_677	chr3	-	176	1	Intergenic	novelGene_7370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	677	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	144662764	144662588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_144662600_144662800
Isoform_124386_15	chr3	+	173	1	Intergenic	novelGene_7371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGGAACTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	145337173	145337346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_145337200_145337300
Isoform_124387_4	chr3	-	1937	1	NIC	ENSMUSG00000028195.5	novel	2019	5	NA	NA	6	-1063	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	145355730	145353793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_145353800_145355700
Isoform_124388_3	chr3	+	173	1	Intergenic	novelGene_7372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGAAAACCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	145389652	145389825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_145389700_145389800
Isoform_124389_11	chr3	+	192	1	Intergenic	novelGene_7373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGGTGATTTAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	145414242	145414434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_145414200_145414400
Isoform_124394_10	chr3	+	252	1	FSM	ENSMUSG00000105388.2	ENSMUST00000197973.2	321	1	109	-40	109	40	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	8410	False	NA	NA	False	AATAAA	-15	NA	145584883	145585135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_145584900_145585100
Isoform_124397_11	chr3	+	174	1	Intergenic	novelGene_7374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAATATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	145662821	145662995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_145662800_145663000
Isoform_124398_248	chr12	+	181	1	Intergenic	novelGene_2635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75663418	75663599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_75663400_75663600
Isoform_1244_1269	SIRV7	-	943	5	FSM	SIRV7A	SIRV706	949	5	1	5	1	1	multi-exon	FALSE	canonical	3	3147	junction_1	1522.61994601411	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCTAAGAGATCGACG	NA	False	NA	NA	False	NA	NA	NA	147956	56036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
Isoform_124400_4	chr3	-	159	1	Intergenic	novelGene_7376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTCAGGGACAAGCAG	2116	False	NA	NA	False	NA	NA	NA	145922800	145922641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_145922600_145922800
Isoform_124401_92	chr3	-	176	1	Intergenic	novelGene_7377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	6892	False	NA	NA	False	NA	NA	NA	146147005	146146829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_146146800_146147000
Isoform_124403_3	chr3	-	169	1	Intergenic	novelGene_7378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAATAGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	146181755	146181586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_146181600_146181800
Isoform_124411_9	chr3	+	177	1	Intergenic	novelGene_7379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	148367777	148367954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_148367800_148368000
Isoform_124428_12	chr3	-	175	1	Intergenic	novelGene_7380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCTTAAAAAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	151821786	151821611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_151821600_151821800
Isoform_124429_17	chr3	-	2075	1	FSM	ENSMUSG00000028035.14	ENSMUST00000196291.2	4913	1	19	2819	-4	-2819	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	151915920	151913845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_151913800_151915900
Isoform_124437_20	chr3	-	183	1	Intergenic	novelGene_6987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAAGCTGTGTATATG	NA	False	NA	NA	False	NA	NA	NA	51279049	51278866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_51278900_51279000
Isoform_124438_4	chr3	-	1871	1	FSM	ENSMUSG00000070522.5	ENSMUST00000094335.5	648	1	-19	-1204	-19	1204	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGCCACCAGATTACCT	NA	False	NA	NA	False	ATTAAA	-37	NA	28819528	28817657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_28817700_28819500
Isoform_124443_111	chr3	+	177	1	Intergenic	novelGene_7381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4335	False	NA	NA	False	NA	NA	NA	152925488	152925665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_152925500_152925700
Isoform_124447_63	chr3	+	176	1	Intergenic	novelGene_7382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153544828	153545004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_153544800_153545000
Isoform_124450_3	chr3	-	692	1	NIC	ENSMUSG00000005493.16	novel	3325	20	NA	NA	213	-47961	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCCTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	153611562	153610870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_153610900_153611600
Isoform_124458_5	chr3	-	330	1	Intergenic	novelGene_7383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	153659771	153659441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_153659400_153659800
Isoform_12446_691	chr11	-	1463	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-22	-3	4	3	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGGACTATGTTGTTAA	NA	False	NA	-7	True	AATAAA	-15	NA	43638831	43620832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
Isoform_124461_22	chr3	-	177	1	Intergenic	novelGene_7384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGAGTGCTATT	NA	False	NA	NA	False	NA	NA	NA	153814672	153814495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_153814500_153814700
Isoform_124462_9	chr3	+	177	1	Intergenic	novelGene_6944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4731	False	NA	NA	False	NA	NA	NA	29158953	29159130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_29159000_29159100
Isoform_124463_5	chr3	-	180	1	Intergenic	novelGene_7385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGTAAATTATTTTGA	NA	False	NA	NA	False	NA	NA	NA	156546946	156546766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_156546800_156546900
Isoform_124464_3	chr3	-	220	1	Intergenic	novelGene_7386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAACTGATTTTTC	NA	False	NA	NA	False	NA	NA	NA	157188129	157187909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_157187900_157188100
Isoform_124465_4	chr3	+	177	1	Intergenic	novelGene_7387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAGAAACATTACAT	NA	False	NA	NA	False	NA	NA	NA	157268351	157268528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_157268400_157268500
Isoform_124466_3	chr3	+	177	1	Intergenic	novelGene_6945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATATTCAAGT	NA	False	NA	NA	False	NA	NA	NA	29820950	29821127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_29821000_29821100
Isoform_124467_13	chr3	+	177	1	Intergenic	novelGene_7388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAACTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	157400302	157400479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_157400300_157400500
Isoform_12447_52	chr11	-	1941	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-4	-499	-4	2	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCTGTACAACTTGTG	NA	False	NA	NA	False	NA	NA	NA	43638813	43620336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
Isoform_124470_104	chr3	-	171	1	Intergenic	novelGene_7389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATGTC	NA	False	NA	NA	False	NA	NA	NA	157649076	157648905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_157648900_157649100
Isoform_124472_5	chr3	-	185	1	Intergenic	novelGene_7390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAAAATCCATTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	157656448	157656263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_157656300_157656400
Isoform_124473_8	chr3	+	229	1	Intergenic	novelGene_7391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCAGCATCAATGTTGG	NA	False	NA	NA	False	NA	NA	NA	157659127	157659356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_157659100_157659400
Isoform_124475_5	chr3	-	3019	2	Antisense	novelGene_ENSMUSG00000039988.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157707204	157704165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_157707067_157707086
Isoform_124483_19	chr3	-	1607	1	FSM	ENSMUSG00000055436.19	ENSMUST00000199742.2	1570	1	-14	-23	-2	23	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGAAGTGGGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	157737405	157735798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_157735800_157737400
Isoform_124485_24	chr3	-	632	1	FSM	ENSMUSG00000105201.2	ENSMUST00000198192.2	2470	1	-191	2029	-191	-2029	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157742237	157741605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_157741600_157742200
Isoform_124486_10	chr3	+	176	1	Intergenic	novelGene_6946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	30534360	30534536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_30534400_30534500
Isoform_124489_5	chr3	+	1200	1	NIC	ENSMUSG00000028173.11	novel	3559	12	NA	NA	19	-10384	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	159545327	159546527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_159545300_159546500
Isoform_124490_225	chr3	+	194	1	Intergenic	novelGene_6947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCCCCTTCCTTAGAT	NA	False	NA	3	True	NA	NA	NA	30676590	30676784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_30676600_30676800
Isoform_124493_5	chr3	-	2620	1	FSM	ENSMUSG00000074653.11	ENSMUST00000194840.2	1822	1	-96	-702	-21	702	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAGAAAGAATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	30754013	30751393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_30751400_30754000
Isoform_124497_5	chr3	+	173	1	Intergenic	novelGene_6948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATATTAAGGGGTT	NA	False	NA	NA	False	NA	NA	NA	30831463	30831636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_30831500_30831600
Isoform_124499_5	chr3	-	2902	1	Antisense	novelGene_ENSMUSG00000037661.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30910439	30907537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_30907500_30910400
Isoform_124501_3	chr3	-	171	1	Intergenic	novelGene_6949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31005700	31005529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_31005500_31005700
Isoform_124502_12	chr3	-	2806	1	NIC	ENSMUSG00000037652.16	novel	3491	17	NA	NA	2	-8211	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31023552	31020746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_-_31020700_31023600
Isoform_12451_11	chr11	-	7279	7	NIC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	2	6	intron_retention	FALSE	canonical	3	649	junction_4	53.2741859523812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTATGTTGTTAATTT	NA	False	NA	-4	True	AATAAA	-18	NA	43638833	43620829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
Isoform_124516_74	chr3	-	167	1	Intergenic	novelGene_6950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	31110362	31110195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_31110200_31110400
Isoform_124517_4	chr3	-	322	1	Intergenic	novelGene_6951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAACCAAATTCCAA	NA	False	NA	NA	False	NA	NA	NA	31111045	31110723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_31110700_31111000
Isoform_124520_4	chr3	-	237	1	Intergenic	novelGene_6952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCTTTTTAGAGTTAA	NA	False	NA	23	True	NA	NA	NA	31115131	31114894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_31114900_31115100
Isoform_124521_30	chr3	-	169	1	Intergenic	novelGene_6953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTGGACCAATTGTG	NA	False	NA	-44	True	NA	NA	NA	31115130	31114961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_31115000_31115100
Isoform_124525_37	chr15	-	175	1	Intergenic	novelGene_4068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81627026	81626851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81626900_81627000
Isoform_124526_38	chr3	-	176	1	Intergenic	novelGene_6954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	31196454	31196278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_31196300_31196500
Isoform_124527_10	chr3	+	171	1	Intergenic	novelGene_6955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAAGTACAGC	NA	False	NA	NA	False	NA	NA	NA	31199577	31199748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_31199600_31199700
Isoform_124530_7	chr3	-	180	1	ISM	ENSMUSG00000069072.10	ENSMUST00000091259.9	8897	8	103966	3375	51982	-3375	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGCATGTGCT	NA	False	NA	NA	False	NA	NA	NA	31260561	31260381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_31260400_31260600
Isoform_124532_7	chr3	+	175	1	Intergenic	novelGene_6956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATGATTC	NA	False	NA	NA	False	NA	NA	NA	32330440	32330615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_32330400_32330600
Isoform_124533_3	chr3	+	169	1	Intergenic	novelGene_6957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACACACACACACA	NA	False	NA	NA	False	NA	NA	NA	32350253	32350422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_32350300_32350400
Isoform_124534_10	chr3	+	150	1	Intergenic	novelGene_6958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	32380454	32380604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_32380500_32380600
Isoform_124535_9	chr3	-	3049	1	ISM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	27838	0	27620	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCGGTTCTGAGTCGGG	6232	False	NA	0	True	AATAAA	-26	NA	32391989	32388940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_32388900_32392000
Isoform_124539_4	chr3	-	4597	1	ISM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	26290	0	26072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCGGTTCTGAGTCGGG	4684	False	NA	0	True	AATAAA	-26	NA	32393537	32388940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_32388900_32393500
Isoform_124540_3	chr3	-	4765	1	ISM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	26122	0	25904	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCGGTTCTGAGTCGGG	4516	False	NA	0	True	AATAAA	-26	NA	32393705	32388940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_32388900_32393700
Isoform_124541_3	chr3	-	4843	1	ISM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	25989	55	25771	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGGCTTTTTGTGTTCA	4383	False	NA	-18	True	GATAAA	-16	NA	32393838	32388995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_32389000_32393800
Isoform_124543_7	chr3	-	3142	1	ISM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	27741	4	27523	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTCGGTTCTGAGT	6135	False	NA	-4	True	AATAAA	-22	NA	32392086	32388944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_32388900_32392100
Isoform_124544_5	chr3	-	4344	1	ISM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	26537	6	26319	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGCGTTCGGTTCTGA	4931	False	NA	-6	True	AATAAA	-20	NA	32393290	32388946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_32388900_32393300
Isoform_12455_438	chr11	-	2063	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	20	5	20	-3	multi-exon	FALSE	canonical	2	61	junction_9	50.7897627480184	438	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGGTTATCTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	44361305	44345402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
Isoform_124550_8	chr3	-	1937	1	FSM	ENSMUSG00000027663.13	ENSMUST00000195055.2	3813	1	319	1557	-17	-1557	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTAAACGATACTCCTA	NA	False	NA	NA	False	NA	NA	NA	32419844	32417907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_32417900_32419800
Isoform_124551_6	chr3	+	2127	2	Antisense	novelGene_ENSMUSG00000027663.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATGAAAGAA	4546	False	NA	NA	False	NA	NA	NA	32419415	32421571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_32421233_32421261
Isoform_124552_4	chr3	-	1579	1	Antisense	novelGene_ENSMUSG00000027668.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAGCCTAAAATGGC	NA	False	NA	NA	False	NA	NA	NA	32617749	32616170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_32616200_32617700
Isoform_124553_9	chr3	+	176	1	Intergenic	novelGene_6959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAACCTAGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	32705852	32706028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_32705900_32706000
Isoform_124554_3	chr3	-	160	1	Intergenic	novelGene_6960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	5514	False	NA	NA	False	NA	NA	NA	32758552	32758392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_32758400_32758600
Isoform_124556_9	chr3	-	4096	1	FSM	ENSMUSG00000037531.9	ENSMUST00000192021.2	1505	1	825	-3416	367	3416	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCTCTAACTAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	32790929	32786833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_32786800_32790900
Isoform_124558_3	chr3	-	175	1	Intergenic	novelGene_6961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAAAATTAATTGT	NA	False	NA	NA	False	NA	NA	NA	32817913	32817738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_32817700_32817900
Isoform_124564_18	chr3	+	178	1	Intergenic	novelGene_6962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAAGACTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	33848894	33849072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_33848900_33849100
Isoform_124565_13	chr3	+	681	1	FSM	ENSMUSG00000027677.18	ENSMUST00000199523.2	696	1	17	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	33854340	33855021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_33854300_33855000
Isoform_124567_3	chr3	+	176	1	Intergenic	novelGene_6963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGTGAGCAGAGGT	4913	False	NA	NA	False	NA	NA	NA	34040962	34041138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_34041000_34041100
Isoform_124570_11	chr3	-	203	1	Intergenic	novelGene_6964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGTAAAAACAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	34082116	34081913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_34081900_34082100
Isoform_124577_5	chr3	-	6976	1	Intergenic	novelGene_6909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	4228000	4221024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_4221000_4228000
Isoform_124578_3	chr1	+	4403	2	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAACGGTTTCCATACAA	NA	False	NA	NA	False	NA	NA	NA	45599150	45603610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_45603447_45603503
Isoform_124584_4472	chr3	+	2463	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	-408	2	-408	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4472	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGCCTGAGTCTTTCA	4199	False	NA	17	True	AATAAA	-22	NA	34704145	34706608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_34704100_34706600
Isoform_12460_194	chr11	-	1156	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	14	5283	14	-2472	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTAGTCTCCCACACAG	NA	False	NA	-1	True	AATAAA	-23	NA	45835748	45824378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
Isoform_12461_10	chr11	-	1226	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	-58	5285	-58	-2474	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCCTAGTCTCCCACAC	NA	False	NA	-3	True	AATAAA	-21	NA	45835820	45824380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
Isoform_12462_24	chr11	-	3662	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	5	2786	5	25	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTATTGCTTCCCCGAA	NA	False	NA	NA	False	AATAAA	-17	NA	45835757	45821881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
Isoform_124621_10	chr3	-	679	1	Intergenic	novelGene_6965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34708415	34707736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_34707700_34708400
Isoform_124623_5	chr3	-	240	1	Intergenic	novelGene_6966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACAACAAATAAACAA	7960	False	NA	NA	False	NA	NA	NA	34749999	34749759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_34749800_34750000
Isoform_124625_6	chr3	-	165	1	Intergenic	novelGene_6967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATTTAAAAAAAAAAAAAAA	382	False	NA	NA	False	NA	NA	NA	34761041	34760876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_34760900_34761000
Isoform_124626_17	chr3	-	257	1	Intergenic	novelGene_6968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCTACCTACCATCTAA	NA	False	NA	NA	False	ATTAAA	-34	NA	34766467	34766210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_34766200_34766500
Isoform_124628_6	chr3	-	175	1	Intergenic	novelGene_6969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAACTAGTCTTAGA	NA	False	NA	NA	False	NA	NA	NA	34775182	34775007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_34775000_34775200
Isoform_124629_3	chr3	+	2019	1	Intergenic	novelGene_6972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34818293	34820312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_34818300_34820300
Isoform_124630_9	chr3	-	171	1	Intergenic	novelGene_6973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTTAAAAAAAAAGTACTC	NA	False	NA	NA	False	NA	NA	NA	34845730	34845559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_34845600_34845700
Isoform_124633_31	chr3	-	1519	1	Intergenic	novelGene_6974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	35878250	35876731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_35876700_35878200
Isoform_124634_3	chr3	+	4481	1	Antisense	novelGene_ENSMUSG00000027506.16_AS_novelGene_ENSMUSG00000040269.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTGGCCCTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	8988615	8993096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_8988600_8993100
Isoform_12464_23	chr11	-	6440	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	13	0	13	0	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTGCTGCTTGGTCTC	NA	False	NA	-5	True	AATAAA	-15	NA	45835749	45819095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
Isoform_124642_27	chr3	+	202	1	Intergenic	novelGene_6975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTATCCCTTTTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	36110700	36110902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_36110700_36110900
Isoform_124643_4	chr3	+	2900	1	ISM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	16419	7	7914	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATATACTACTATTA	NA	False	NA	21	True	AATAAA	-12	NA	36221584	36224484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_36221600_36224500
Isoform_12465_3	chr11	-	3717	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	-52	2788	-52	23	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTATTGCTTCCCCG	NA	False	NA	NA	False	AATAAA	-15	NA	45835814	45821883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
Isoform_124651_20	chr3	-	170	1	Intergenic	novelGene_6976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	37445459	37445289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_37445300_37445500
Isoform_124655_3	chr3	+	1678	1	Intergenic	novelGene_6977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAAACAACAAA	8263	False	NA	NA	False	NA	NA	NA	37722971	37724649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_37723000_37724600
Isoform_12466_12	chr11	-	2239	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	11	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	12.8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTCCTACAGAATGAGT	6312	False	NA	NA	False	AATAAA	-26	NA	45846310	45837669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
Isoform_124665_3	chr3	-	1877	1	Intergenic	novelGene_6978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40911353	40909476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_40909500_40911400
Isoform_124666_3	chr3	+	8009	1	Antisense	novelGene_ENSMUSG00000049940.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-41	NA	41021619	41029628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_41021600_41029600
Isoform_124668_6	chr3	+	177	1	Intergenic	novelGene_6979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	41170081	41170258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_41170100_41170300
Isoform_12467_103	chr11	-	1219	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	11	1020	0	-1020	multi-exon	FALSE	canonical	3	110	junction_3	12.8	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGGAGTCATTTTTAG	6312	False	NA	-1	True	TATAAA	-18	NA	45846310	45838689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
Isoform_124670_4	chr3	-	1099	1	Genic_Genomic	ENSMUSG00000097639.3	novel	NA	NA	NA	NA	-3	-3293	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAACAAAAGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	41447630	41446531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr3_-_41446500_41447600
Isoform_124709_9	chr3	+	191	1	Intergenic	novelGene_6980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	41641695	41641886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_41641700_41641900
Isoform_12471_5	chr11	-	2468	5	NIC	ENSMUSG00000011254.17	novel	2250	6	NA	NA	1	-1020	intron_retention	FALSE	canonical	3	110	junction_2	13.8270568090248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGGAGTCATTTTTAG	6302	False	NA	-1	True	TATAAA	-18	NA	45846320	45838689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_45839156_45841022_45842459_45843561_45843732_45844882_45845060_45846101
Isoform_124711_5	chr3	+	193	1	Intergenic	novelGene_6912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTTTTGGGCAAATGG	NA	False	NA	NA	False	NA	NA	NA	9110235	9110428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_9110200_9110400
Isoform_124712_8	chr3	-	177	1	Intergenic	novelGene_6981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAATATATT	NA	False	NA	NA	False	NA	NA	NA	49102307	49102130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_49102100_49102300
Isoform_124713_6	chr3	+	177	1	Intergenic	novelGene_6982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACACCTGTG	NA	False	NA	NA	False	NA	NA	NA	49395640	49395817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_49395600_49395800
Isoform_124714_4	chr3	+	3818	1	FSM	ENSMUSG00000103464.2	ENSMUST00000194318.2	1511	1	-2309	2	-2309	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	51008771	51012589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51008800_51012600
Isoform_124719_22	chr3	-	199	1	Intergenic	novelGene_6983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACATCAACTTCCAGCG	NA	False	NA	NA	False	NA	NA	NA	51225775	51225576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_51225600_51225800
Isoform_124720_22	chr3	+	180	1	Intergenic	novelGene_6984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	51243629	51243809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_51243600_51243800
Isoform_124721_1015	chr3	+	174	1	Intergenic	novelGene_6985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1015	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	51251816	51251990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_51251800_51252000
Isoform_124723_510	chr3	+	176	1	Intergenic	novelGene_6986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	510	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAAGTTCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	51262578	51262754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_51262600_51262800
Isoform_124725_20	chr5	-	183	1	Intergenic	novelGene_8933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124638564	124638381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124638400_124638600
Isoform_124726_369	chr3	-	173	1	Intergenic	novelGene_6908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	3102114	3101941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_3101900_3102100
Isoform_124727_17	chr3	+	151	1	Intergenic	novelGene_6988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAAATAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	51299949	51300100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_51299900_51300100
Isoform_124728_185	chr3	+	176	1	Intergenic	novelGene_6989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	51300652	51300828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_51300700_51300800
Isoform_124729_33	chr3	-	166	1	Intergenic	novelGene_6990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	51305017	51304851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_51304900_51305000
Isoform_124730_7	chr3	+	165	1	Intergenic	novelGene_6991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTAAAGGTATAAACA	NA	False	NA	NA	False	NA	NA	NA	51307421	51307586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_51307400_51307600
Isoform_124734_5	chr3	-	2720	1	Intergenic	novelGene_6992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5757	False	NA	NA	False	NA	NA	NA	51328531	51325811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_51325800_51328500
Isoform_124735_54	chr3	+	184	1	Intergenic	novelGene_6993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACTTCACCTAACATTT	NA	False	NA	NA	False	NA	NA	NA	51333219	51333403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_51333200_51333400
Isoform_124738_5	chr3	+	178	1	Intergenic	novelGene_6913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGGGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9229281	9229459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_9229300_9229500
Isoform_124739_31	chr3	-	188	1	Intergenic	novelGene_6994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAATTAAAAATC	NA	False	NA	NA	False	NA	NA	NA	51342058	51341870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_51341900_51342100
Isoform_124741_83	chr3	-	160	1	Antisense	novelGene_ENSMUSG00000063273.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	51348368	51348208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_51348200_51348400
Isoform_124747_3	chr3	+	181	1	Intergenic	novelGene_6995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	51433433	51433614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_51433400_51433600
Isoform_124749_13	chr3	-	178	1	Intergenic	novelGene_6996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	51481104	51480926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_51480900_51481100
Isoform_124750_140	chr3	+	180	1	Intergenic	novelGene_6997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGCAATATTTTTTAAA	NA	False	NA	3	True	NA	NA	NA	51482741	51482921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_51482700_51482900
Isoform_124752_59	chr3	+	177	1	Intergenic	novelGene_6914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACACTA	NA	False	NA	NA	False	NA	NA	NA	9278179	9278356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_9278200_9278400
Isoform_124756_23	chr3	+	175	1	FSM	ENSMUSG00002076132.1	ENSMUST00020183798.1	117	1	107	-165	107	165	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGACTGCCTG	NA	False	NA	NA	False	NA	NA	NA	51736439	51736614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_51736400_51736600
Isoform_124761_38	chr3	-	5172	1	Intergenic	novelGene_6998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	53026127	53020955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_53021000_53026100
Isoform_124766_5	chr3	-	180	1	Intergenic	novelGene_6999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAATTAGTAAACTG	NA	False	NA	NA	False	NA	NA	NA	53084223	53084043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_53084000_53084200
Isoform_124767_41	chr3	-	176	1	Intergenic	novelGene_7000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAAAAAGTTGG	NA	False	NA	NA	False	NA	NA	NA	53221630	53221454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_53221500_53221600
Isoform_124771_5	chr3	+	1167	1	FSM	ENSMUSG00000049504.13	ENSMUST00000198186.2	940	1	-226	-1	-85	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53371001	53372168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_53371000_53372200
Isoform_124774_27	chr3	-	170	1	Intergenic	novelGene_7001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53667944	53667774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_53667800_53667900
Isoform_124775_7	chr3	+	181	1	Intergenic	novelGene_7002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGCATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	53739290	53739471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_53739300_53739500
Isoform_12478_44	chr11	-	6328	31	FSM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	-33	3	31	-3	multi-exon	FALSE	canonical	3	40	junction_25	27.300895386212	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCATCTTCGTCCTG	NA	False	NA	-3	True	ATTAAA	-19	NA	46203154	46084684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
Isoform_124782_3060	chr3	+	1509	1	FSM	ENSMUSG00000069014.5	ENSMUST00000091130.5	1488	1	-23	2	-23	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3060	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_54388800_54390300
Isoform_124783_8	chr4	+	364	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	-740	multi-exon	FALSE	canonical	3	4269	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTGTTGGTGGTATT	-3	True	NA	NA	False	NA	NA	NA	12232781	12233211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_12232839_12232904
Isoform_12479_11	chr11	-	3017	6	FSM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	413	2	13	-2	multi-exon	FALSE	canonical	3	31	junction_5	5.01996015920445	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTGTGGACTCTTT	NA	False	NA	-27	True	AATAAA	-16	NA	48707767	48697232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
Isoform_12480_10	chr11	-	3458	6	FSM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	-26	0	-26	0	multi-exon	FALSE	canonical	3	31	junction_5	5.01996015920445	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48708206	48697230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
Isoform_124801_10	chr3	-	3196	1	FSM	ENSMUSG00000104831.2	ENSMUST00000197444.2	1688	1	-59	-1449	-59	1449	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGTGCCCATGTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	54542048	54538852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_-_54538900_54542000
Isoform_124808_3	chr3	+	176	1	Intergenic	novelGene_7003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	55312460	55312636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_55312500_55312600
Isoform_124809_25	chr3	+	176	1	Intergenic	novelGene_7004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGAATGGGCTGTAGG	NA	False	NA	NA	False	NA	NA	NA	55477705	55477881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_55477700_55477900
Isoform_124812_6	chr3	-	235	1	Intergenic	novelGene_7006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCTTAAACTTGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	57204937	57204702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_57204700_57204900
Isoform_124816_9	chr3	+	170	1	Intergenic	novelGene_7007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAGAAATTTAACTT	9868	False	NA	NA	False	NA	NA	NA	57745960	57746130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_57746000_57746100
Isoform_12483_11	chr11	-	2539	6	FSM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	893	0	-229	0	multi-exon	FALSE	canonical	3	31	junction_5	5.01996015920445	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48707287	48697230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
Isoform_124834_3	chr3	+	179	1	Intergenic	novelGene_7008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAAAGTGAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	58076919	58077098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_58076900_58077100
Isoform_124836_12	chr3	+	4200	1	FSM	ENSMUSG00000027806.10	ENSMUST00000199784.2	3022	1	-1174	-4	-11	4	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	58322124	58326324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_58322100_58326300
Isoform_124842_12	chr3	-	176	1	Intergenic	novelGene_7009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATTAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	58461061	58460885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_58460900_58461100
Isoform_124843_3	chr3	-	177	1	Intergenic	novelGene_7010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTGAAGAAC	NA	False	NA	NA	False	NA	NA	NA	58465796	58465619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_58465600_58465800
Isoform_124844_10	chr3	+	753	1	NIC	ENSMUSG00000075700.11	novel	3157	6	NA	NA	30	-11394	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58484086	58484839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr3_+_58484100_58484800
Isoform_124845_3	chr14	-	200	1	Intergenic	novelGene_3550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGATGTAGCTGGATG	NA	False	NA	NA	False	NA	NA	NA	55933930	55933730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_55933700_55933900
Isoform_124846_63	chr3	+	1793	2	NNC	ENSMUSG00000075700.11	novel	3157	6	NA	NA	14611	-4	at_least_one_novel_splicesite	FALSE	non_canonical	3	55	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAACCCTGCTTTGTGAA	NA	False	NA	11	True	AATAAA	-14	NA	58498729	58500550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr3_+_58499681_58499708
Isoform_124853_57	chr3	-	182	1	Intergenic	novelGene_7011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAAAATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	58609910	58609728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_58609700_58609900
Isoform_124854_13	chr3	+	203	1	Intergenic	novelGene_7012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTATAGCAGTTACTTAA	NA	False	NA	NA	False	NA	NA	NA	58855392	58855595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_58855400_58855600
Isoform_124855_4	chr3	+	175	1	Intergenic	novelGene_7013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTATTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	58887023	58887198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_58887000_58887200
Isoform_124857_57	chr3	-	188	1	Intergenic	novelGene_7014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTAGCCGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	58954186	58953998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_58954000_58954200
Isoform_124858_4	chr3	-	180	1	Intergenic	novelGene_7015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGAGGGAGGGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	58998228	58998048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_58998000_58998200
Isoform_124859_3	chr3	+	1431	1	ISM	ENSMUSG00000056476.14	ENSMUST00000199659.5	11006	44	310493	272	59918	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAAGTCTGCAGAT	NA	False	NA	NA	False	ATTAAA	-9	NA	59224400	59225831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_+_59224400_59225800
Isoform_12486_45	chr11	-	3745	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	-8	1999	-8	1196	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGAATTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	49603558	49564328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
Isoform_124860_23	chr3	+	176	1	Intergenic	novelGene_7241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5256	False	NA	NA	False	NA	NA	NA	102017758	102017934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_102017800_102017900
Isoform_124861_3	chr3	-	184	1	Intergenic	novelGene_7017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGTACAATTCTATTCCA	NA	False	NA	NA	False	NA	NA	NA	60193062	60192878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_60192900_60193100
Isoform_124862_11	chr3	-	4981	1	Intergenic	novelGene_7018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	60402326	60397345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_60397300_60402300
Isoform_124866_5	chr3	+	2251	1	FSM	ENSMUSG00000027765.7	ENSMUST00000193943.2	2203	1	-46	-2	-42	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTTGGCATAGTATAAT	NA	False	NA	NA	False	AATAAA	-14	NA	60910173	60912424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_60910200_60912400
Isoform_124868_113	chr3	+	174	1	Antisense	novelGene_ENSMUSG00000103473.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCTAAGGGACCAGGGA	NA	False	NA	NA	False	NA	NA	NA	61266945	61267119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_61266900_61267100
Isoform_124872_44	chr3	+	2488	1	FSM	ENSMUSG00000036894.4	ENSMUST00000049064.4	6793	1	2920	1385	2920	-1385	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTGTGGTTTTGTGTTT	NA	False	NA	70	True	AATACA	-27	NA	61271978	61274466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_61272000_61274500
Isoform_124873_6	chr3	+	3867	1	FSM	ENSMUSG00000036894.4	ENSMUST00000049064.4	6793	1	2921	5	2921	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGCCCTGAGTTGTT	NA	False	NA	NA	False	AATAAA	-36	NA	61271979	61275846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_61272000_61275800
Isoform_124878_5	chr3	-	860	1	Antisense	novelGene_ENSMUSG00000036894.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATACTTACACTCATACA	NA	False	NA	NA	False	NA	NA	NA	61274773	61273913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_-_61273900_61274800
Isoform_124879_20	chr3	-	167	1	Intergenic	novelGene_7019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	61396675	61396508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_61396500_61396700
Isoform_124885_4	chr3	-	176	1	Intergenic	novelGene_7020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	62161148	62160972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_62161000_62161100
Isoform_124887_12	chr3	+	2049	1	Intergenic	novelGene_6915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9599271	9601320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_9599300_9601300
Isoform_124888_4	chr3	-	2761	1	Intergenic	novelGene_7021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTGCAGATGTAGTCAA	NA	False	NA	NA	False	NA	NA	NA	62345813	62343052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_62343100_62345800
Isoform_124889_11	chr3	-	1405	1	Intergenic	novelGene_7022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-43	NA	62353699	62352294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_62352300_62353700
Isoform_124891_35	chr3	+	1661	1	Antisense	novelGene_ENSMUSG00000027770.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	CATAAA	-45	NA	62385051	62386712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr3_+_62385100_62386700
Isoform_124892_25	chr3	+	174	1	Intergenic	novelGene_7023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAATAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	63169020	63169194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_63169000_63169200
Isoform_124893_54	chr4	-	2417	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	44	229	0	-229	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAATGTTATTCTTGAG	-11	True	NA	NA	False	AATAAA	-24	NA	3574809	3549269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
Isoform_124894_3	chr4	-	2612	9	NNC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	0	-228	intron_retention	FALSE	canonical	1	1	junction_6	29.7394939432399	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGTTATTCTTGAGA	-11	True	NA	NA	False	AATAAA	-25	NA	3574809	3549268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3567280_3567475_3569363_3569753_3570320_3570373_3574703
Isoform_124899_6220	chr4	-	502	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	66	3138	66	1	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	6220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGCTGGCTTTTGTTC	-1	True	NA	-39	True	AATAAA	-16	NA	3835599	3834471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
Isoform_1249_965	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	1	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_4	1573.00102987887	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCTAAGAGATCGACG	NA	False	NA	NA	False	NA	NA	NA	147956	56036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
Isoform_124901_113	chr4	-	530	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	33	3143	33	-4	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAAATTTTGCTGGCTTT	NA	False	NA	-44	True	AATAAA	-11	NA	3835632	3834476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
Isoform_124907_81	chr4	-	6536	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	7	0	7	0	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGCTGTGTTGGTGTTT	-20	True	NA	-4	True	AATAAA	-22	NA	4793348	4762483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
Isoform_124911_163	chr4	-	3503	31	FSM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	2	2	2	-2	multi-exon	FALSE	canonical	3	82	junction_12	11.571804814577	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACTCTTATCTTATTTA	27	True	NA	NA	False	ATTAAA	-19	NA	6454269	6396208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
Isoform_124914_4	chr4	-	4909	30	NIC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-29	-7	intron_retention	FALSE	canonical	3	82	junction_12	11.6817692859608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGCACTCTTATCTT	-4	True	NA	NA	False	ATTAAA	-14	NA	6454300	6396213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
Isoform_124915_16	chr4	-	1937	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	1	1915	1	-1915	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGCACTCTCAATTTG	0	True	NA	NA	False	AATAAA	-18	NA	8239040	8145276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
Isoform_124916_4	chr4	-	3853	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	-2	2	-2	-2	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATGTTGCTTTGATGA	-3	True	NA	NA	False	AATAAA	-21	NA	8239043	8143363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
Isoform_124921_179	chr4	-	4409	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	79	2206	3	-2206	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCCTCGCTCTTACTT	7	True	NA	0	True	AATAAA	-21	NA	9669083	9451284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124922_123	chr4	-	4440	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	47	2207	-29	-2207	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	-1	False	NA	-1	True	AATAAA	-20	NA	9669115	9451285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124928_18	chr4	-	6644	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	45	5	-31	-5	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACACTGAATGTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	9669117	9449083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124929_23	chr4	-	6610	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	79	5	3	-5	multi-exon	TRUE	canonical	0	0	junction_21	108.084473020543	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACACTGAATGTTTTGT	7	True	NA	NA	False	AATAAA	-25	NA	9669083	9449083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124933_14	chr4	-	4334	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	3	-2206	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	122.196055718087	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCCTCGCTCTTACTT	7	True	NA	0	True	AATAAA	-21	NA	9669083	9451284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124939_73	chr4	-	4359	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	79	2208	3	-2208	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCCTCGCTCTTAC	7	True	NA	-2	True	AATAAA	-19	NA	9669083	9451286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124941_11	chr4	-	6562	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	79	5	3	-5	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACACTGAATGTTTTGT	7	True	NA	NA	False	AATAAA	-25	NA	9669083	9449083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124942_52	chr4	-	4390	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	45	2211	-31	-2211	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAATTTTTCCTCGCTCT	NA	False	NA	-5	True	AATAAA	-16	NA	9669117	9451289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124944_11	chr4	-	4300	22	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	-11	-2206	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	128.779743058535	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCCTCGCTCTTACTT	-7	True	NA	0	True	AATAAA	-21	NA	9669097	9451284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124946_11	chr4	-	4510	25	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-31	-2208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	132.636663012155	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCCTCGCTCTTAC	NA	False	NA	-2	True	AATAAA	-19	NA	9669117	9451286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9596015_9596085_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124949_109	chr4	-	2809	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	79	-4	3	4	multi-exon	FALSE	canonical	0	0	junction_11	124.875606744325	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCATTATTTTGAAC	7	True	NA	0	True	AATAAA	-21	NA	9669083	9575262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124950_93	chr4	-	2838	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	45	1	-31	-1	multi-exon	FALSE	canonical	0	0	junction_11	124.875606744325	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGATTGTCATTATTT	NA	False	NA	-5	True	AATAAA	-16	NA	9669117	9575267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124954_33	chr4	-	2761	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	79	-4	3	4	multi-exon	FALSE	canonical	0	0	junction_10	142.503411265212	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCATTATTTTGAAC	7	True	NA	0	True	AATAAA	-21	NA	9669083	9575262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_124959_13	chr4	-	2830	4	FSM	ENSMUSG00000028207.19	ENSMUST00000098275.9	1007	4	79	-1902	3	378	multi-exon	FALSE	canonical	0	0	junction_1	212.653604614536	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGTAACTTTTCTTAA	7	True	NA	NA	False	AATAAA	-26	NA	9669083	9628644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_9630953_9635900_9635970_9639197_9639348_9668780
Isoform_12496_48	chr11	-	5726	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-21	-3207	-8	-3	multi-exon	TRUE	canonical	3	150	junction_7	24.0849049121664	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAAGTGTAGT	NA	False	NA	-13	True	AATAAA	-16	NA	49603558	49562332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
Isoform_124962_935	chr4	-	2916	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	59	2	59	-2	multi-exon	FALSE	canonical	3	844	junction_1	0	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTGTGTTTTTATAT	28	False	11007645	-3	True	AATAAA	-15	NA	11007617	10988663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_10991355_11007392
Isoform_124964_63	chr4	-	2968	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	9	0	9	0	multi-exon	FALSE	canonical	3	844	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTTATATTG	NA	False	NA	-1	True	AATAAA	-17	NA	11007667	10988661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_10991355_11007392
Isoform_124977_6	chr4	-	1060	9	FSM	ENSMUSG00000050323.15	ENSMUST00000126468.8	863	9	-33	-164	1	1	multi-exon	FALSE	canonical	3	35	junction_7	109.001146782958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGTGGTCTGAG	3	True	NA	-7	True	NA	NA	NA	11076182	11051048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073139_11073244_11075979
Isoform_124978_112	chr4	-	1076	9	FSM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	1	5	1	0	multi-exon	FALSE	canonical	0	0	junction_7	119.468549731718	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-18	True	NA	-8	True	NA	NA	NA	11076203	11051049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
Isoform_124980_3	chr4	-	1004	9	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	1	-29	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	102.543588292979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGATTTACTTTTAGTT	-18	True	NA	-37	True	AAAAAG	-26	NA	11076203	11051078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073186_11073244_11075979
Isoform_124981_3	chr4	-	1022	8	NIC	ENSMUSG00000050323.15	novel	863	9	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	137.492263233171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATGTGTGGTCTG	-18	True	NA	-9	True	NA	NA	NA	11076203	11051050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073139_11073244_11075979
Isoform_124982_44	chr4	-	995	8	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	0	-26	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	146.340531024075	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTACTTTTAGTTTAT	-20	True	NA	-34	True	AAAAAG	-29	NA	11076205	11051075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073143_11073244_11075979
Isoform_124983_18	chr4	-	1032	8	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	7	14	combination_of_known_junctions	TRUE	canonical	0	0	junction_6	146.340531024075	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTTTTTTTTAAAGAAA	-12	True	NA	11	True	TTTAAA	-17	NA	11076197	11051030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073143_11073244_11075979
Isoform_124984_5	chr4	-	965	7	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	177.412576279762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGTGGTCTGAG	-20	True	NA	-7	True	NA	NA	NA	11076205	11051048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_11051226_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073143_11073244_11075979
Isoform_124990_1025	chr4	-	3191	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	29	0	29	0	multi-exon	FALSE	canonical	3	373	junction_22	31.9212464720813	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTACAATTTAGTGGT	-9	True	NA	-14	True	ATTAAA	-20	NA	11254229	11204382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
Isoform_124992_33	chr4	-	3637	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	29	-446	29	173	multi-exon	TRUE	canonical	3	373	junction_22	31.9212464720813	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGAAAAAGTGTTTAATT	-9	True	NA	NA	False	AATAAA	-17	NA	11254229	11203936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
Isoform_124999_58	chr4	-	3065	26	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	29	4368	29	4	5prime_fragment	FALSE	canonical	3	373	junction_21	32.4407151585781	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTGTTTGTTCATTT	-9	True	NA	NA	False	ATTAAA	-26	NA	11254229	11208750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
Isoform_125003_36	chr4	-	6752	19	FSM	ENSMUSG00000045205.17	ENSMUST00000084892.12	6754	19	2	0	2	0	multi-exon	FALSE	canonical	3	48	junction_13	8.17176711475418	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTCGTACTTGATCTT	-8	True	NA	-9	True	AATAAA	-24	NA	11322135	11261314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
Isoform_125006_9	chr4	-	3713	14	NIC	ENSMUSG00000040728.16	novel	3864	16	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	2.77776462850274	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCGCACTCTTCTTCTT	7111	False	NA	1	True	AATAAA	-20	NA	11386789	11331933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_11333474_11353294_11353464_11357459_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
Isoform_125008_9	chr4	-	3202	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108301.8	2635	2	-570	3	29	1	multi-exon	FALSE	canonical	3	53	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGACTGCTATGTTTAA	23	True	NA	NA	False	AATAAA	-17	NA	11966391	11959809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11962234_11965613
Isoform_125009_8	chr4	-	2971	3	FSM	ENSMUSG00000049225.15	ENSMUST00000095144.10	2506	3	-468	3	25	1	multi-exon	FALSE	canonical	3	10	junction_2	21.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGACTGCTATGTTTAA	19	True	NA	NA	False	AATAAA	-17	NA	11966395	11959809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11962234_11965613_11965649_11965883
Isoform_125010_7	chr4	-	3025	3	FSM	ENSMUSG00000049225.15	ENSMUST00000095144.10	2506	3	-523	4	2	0	multi-exon	FALSE	canonical	3	10	junction_2	21.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACTGCTATGTTTA	-36	True	NA	NA	False	AATAAA	-16	NA	11966450	11959810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11962234_11965613_11965649_11965883
Isoform_125012_54	chr4	-	2578	3	FSM	ENSMUSG00000049225.15	ENSMUST00000108299.2	2588	3	7	3	0	1	multi-exon	FALSE	canonical	3	47	junction_2	3	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGACTGCTATGTTTAA	-6	True	NA	NA	False	AATAAA	-17	NA	11966420	11959809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11962234_11965613_11965649_11966301
Isoform_125013_8	chr4	-	4206	3	FSM	ENSMUSG00000049225.15	ENSMUST00000108299.2	2588	3	8	-1626	1	3	multi-exon	FALSE	canonical	3	47	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATCTGGCTGTCAAT	-5	True	NA	-4	True	AATAAA	-24	NA	11966419	11958180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11962234_11965613_11965649_11966301
Isoform_125014_5	chr4	-	4251	3	FSM	ENSMUSG00000049225.15	ENSMUST00000108299.2	2588	3	-37	-1626	-12	3	multi-exon	FALSE	canonical	3	47	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATCTGGCTGTCAAT	NA	False	NA	-4	True	AATAAA	-24	NA	11966464	11958180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11962234_11965613_11965649_11966301
Isoform_125015_17	chr4	-	2542	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	33	1626	1	1	multi-exon	FALSE	canonical	3	21	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGACTGCTATGTTTAA	-5	True	NA	NA	False	AATAAA	-17	NA	11966419	11959809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11962234_11966301
Isoform_125017_7	chr4	-	4166	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	33	2	1	-2	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTGAAATCTGGCTG	-5	True	NA	-9	True	AATAAA	-19	NA	11966419	11958185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11962234_11966301
Isoform_125019_3	chr4	-	4219	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	-20	2	-20	-2	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTGAAATCTGGCTG	NA	False	NA	-9	True	AATAAA	-19	NA	11966472	11958185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_11962234_11966301
Isoform_125021_51	chr4	-	3447	28	FSM	ENSMUSG00000049488.15	ENSMUST00000050686.10	3456	28	1	8	1	0	multi-exon	FALSE	canonical	3	27	junction_10	5.81280927905584	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAAATTTTGGTTTGCG	5	True	NA	NA	False	AATAAA	-24	NA	12087956	12039362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
Isoform_125022_15	chr4	-	1303	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	135.606423302203	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATAGTCTTTCTTTCAT	-1	True	NA	-40	True	ATTAAA	-41	NA	12171998	12153721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_125023_140	chr4	-	1147	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	29	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	135.606423302203	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATAGTCTTTCTTTCAT	-10	True	NA	-40	True	ATTAAA	-41	NA	12171842	12153721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_125025_8	chr4	-	1263	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	-1	87	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	135.606423302203	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAGATTTAATGCACTA	125	False	NA	46	True	ATTAAA	-20	NA	12171872	12153635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_125029_352	chr4	-	3083	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	175	-1	-17	1	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGTATATTCAAATTG	6	True	NA	1	True	AATAAA	-20	NA	14826412	14809505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
Isoform_125037_21	chr4	-	3257	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	1	-1	1	1	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGTATATTCAAATTG	-1	True	NA	1	True	AATAAA	-20	NA	14826586	14809505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
Isoform_125041_30	chr4	-	2541	7	NNC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_5	96.2042098870938	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTAATGTTATCTT	6	True	NA	0	True	AATAAA	-14	NA	14826412	14810043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822769_14825498_14825654_14826290
Isoform_125042_66	chr4	-	3054	7	NNC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_5	96.2042098870938	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGTATATTCAAATTG	214	False	NA	1	True	AATAAA	-20	NA	14826387	14809505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822769_14825498_14825654_14826290
Isoform_125052_134	chr4	-	1147	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	125	1687	-107	-1687	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGTTCTGAGGATC	-9	True	NA	-28	True	AATAAA	-16	NA	15945382	15918926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
Isoform_125054_3	chr4	-	3314	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	140	-495	-92	495	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGGTTGTCCAAGTGA	6	True	NA	NA	False	NA	NA	NA	15945367	15916744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
Isoform_125055_45	chr4	-	2517	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	38	103	-29	3	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGAACACTGAGT	-5	True	NA	-1	True	AATAAA	-20	NA	16013850	15997223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_125056_15	chr4	-	2578	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	-24	104	-24	2	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGTGTGAACACTGAG	NA	False	NA	-2	True	AATAAA	-19	NA	16013912	15997224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_125057_45	chr4	-	1826	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	38	794	-29	-688	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCAGTGTATTGGCTT	-5	True	NA	-5	True	ATTAAA	-16	NA	16013850	15997914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_125058_11	chr4	-	2613	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	40	5	-27	-5	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGATTGTGCCCTTTC	-3	True	NA	97	True	ATTAAA	-13	NA	16013848	15997125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_12506_1709	chr11	-	1997	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	36	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_1	263.494104027287	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCCTGTGATCCGTAC	NA	False	NA	-18	True	AATAAA	-18	NA	50101618	50090982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
Isoform_125060_9	chr4	-	2000	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-31	-687	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	43.3912433562349	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCAGTGTATTGGCTTG	-7	True	NA	-4	True	ATTAAA	-17	NA	16013852	15997913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013515
Isoform_125061_5	chr4	-	2688	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	43.3912433562349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTTGTGTGAACACTG	-8	True	NA	-4	True	AATAAA	-17	NA	16013853	15997226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013515
Isoform_125063_24	chr4	-	2489	6	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-30	3	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	32.8852550545073	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGAACACTGAGT	-6	True	NA	-1	True	AATAAA	-20	NA	16013851	15997223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_125065_5	chr4	-	1983	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	23	-688	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	48.0524713204222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCAGTGTATTGGCTT	23	False	NA	-5	True	ATTAAA	-16	NA	16013865	15997914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013515
Isoform_125066_4	chr4	-	2656	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	48.0524713204222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGTGTGAACACTGA	-4	True	NA	-3	True	AATAAA	-18	NA	16013849	15997225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013515
Isoform_125068_3	chr4	-	2111	7	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-29	-686	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	53.5723809439155	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGTGTATTGGCTTGA	-5	True	NA	-3	True	ATTAAA	-18	NA	16013850	15997912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_15999001_16001357_16001470_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013515
Isoform_125069_47	chr4	-	1969	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	81	642	77	-634	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTAGTTCAGTTTTT	52	False	NA	-9	True	AGTAAA	-13	NA	16163566	16123374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_125070_24	chr4	-	2589	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	93	10	89	-2	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTATCTTCTGGT	64	False	NA	-10	True	AATAAA	-17	NA	16163554	16122742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_125071_21	chr4	-	2718	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	-35	9	-35	-1	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTTATCTTCTGGTA	NA	False	NA	-9	True	AATAAA	-18	NA	16163682	16122741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_125072_44	chr4	-	2089	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	-39	642	-39	-634	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTAGTTCAGTTTTT	NA	False	NA	-9	True	AGTAAA	-13	NA	16163686	16123374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_125073_4	chr4	-	3186	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	67	603	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.0921578185967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGTGATTAAATTCTT	42	False	NA	NA	False	ATTAAA	-5	NA	16163576	16122129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_16122266_16122303_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_125076_20	chr4	-	2161	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	-34	-634	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	29.5707583951801	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTAGTTCAGTTTTT	NA	False	NA	-9	True	AGTAAA	-13	NA	16163681	16123374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
Isoform_125077_8	chr4	-	2688	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	65	-4	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	29.5707583951801	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTCTTTTTATCTTCTG	40	False	NA	-12	True	AATAAA	-15	NA	16163578	16122744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
Isoform_125079_7	chr4	-	2775	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	29.5707583951801	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTTTTATCTTCTGG	NA	False	NA	-11	True	AATAAA	-16	NA	16163664	16122743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
Isoform_125081_3	chr4	-	1968	10	NIC	ENSMUSG00000041135.16	novel	2692	11	NA	NA	-7	-636	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	34.9807707317557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTGTAGTTCAGTTT	NA	False	NA	-11	True	AGTAAA	-11	NA	16163654	16123376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_16123892_16124424_16124587_16127620_16127715_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_125092_150	chr4	-	5621	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	27	0	2	0	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATAGCTGTGTTTGGTTT	14	True	NA	-6	True	AATAAA	-15	NA	19570081	19519253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
Isoform_125094_125	chr4	-	5651	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-3	0	-3	0	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATAGCTGTGTTTGGTTT	-16	True	NA	-6	True	AATAAA	-15	NA	19570111	19519253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
Isoform_125100_6	chr4	-	3422	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-120	3138	-120	-1768	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGACAGTGGCTCTAGTT	-2	True	NA	-1	True	ATTAAA	-23	NA	19709113	19611440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_125101_43	chr4	-	6446	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	1	-7	1	7	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCTTGAACTTAGTTA	-29	True	NA	NA	False	NA	NA	NA	19708992	19608295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_125102_48	chr4	-	3365	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	1	3074	1	-1704	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTGAATTTGCTTTG	-29	True	NA	-9	True	ATTAAA	-21	NA	19708992	19611376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_125104_53	chr4	-	3294	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	8	3138	8	-1768	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGACAGTGGCTCTAGTT	-22	True	NA	-1	True	ATTAAA	-23	NA	19708985	19611440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_125108_7	chr4	-	6376	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-21	85	-21	-85	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAGCCACAAATTTAAAAA	162	False	NA	NA	False	NA	NA	NA	19709014	19608387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_125111_6	chr4	-	6524	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-77	-7	-77	7	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCTTGAACTTAGTTA	106	False	NA	NA	False	NA	NA	NA	19709070	19608295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_125115_18	chr4	-	634	5	ISM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-34	64122	-34	-62752	5prime_fragment	FALSE	canonical	3	179	junction_4	12.1937483982572	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTAAGTGGCTTTCG	-3	True	NA	-6	True	NA	NA	NA	19709027	19672424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_125117_8	chr4	-	402	3	ISM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-60	70042	-60	-68672	5prime_fragment	FALSE	canonical	3	179	junction_2	16.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGATTTTAATAATAA	123	False	NA	NA	False	NA	NA	NA	19709053	19678344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_19678436_19687790_19687887_19708838
Isoform_125118_6	chr4	-	491	3	ISM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-149	70042	-149	-68672	5prime_fragment	FALSE	canonical	3	179	junction_2	16.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGATTTTAATAATAA	8	True	NA	NA	False	NA	NA	NA	19709142	19678344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_19678436_19687790_19687887_19708838
Isoform_125120_340	chr4	-	1558	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	30	0	30	0	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCATGTATTTCTTTAA	13	True	NA	0	True	AATAAA	-24	NA	21767182	21757381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
Isoform_125123_9	chr4	-	1403	4	NNC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	79	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	127.017933991841	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGCATGTATTTCTTTA	-5	True	NA	-1	True	AATAAA	-23	NA	21767133	21757382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_21758476_21759369_21759425_21759622_21759794_21767049
Isoform_125125_113	chr4	-	3859	20	NIC	ENSMUSG00000040359.15	novel	5189	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	36.6180404503927	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTTATACAGTCTAT	0	True	NA	-10	True	AATAAA	-19	NA	25281815	25248599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
Isoform_125126_15	chr4	-	3957	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	3	95	combination_of_known_junctions	TRUE	canonical	3	78	junction_1	36.6180404503927	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTATTGCTTGAATG	-3	True	NA	85	True	NA	NA	NA	25281818	25248504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
Isoform_12513_517	chr11	-	1882	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	1	790	1	-4	multi-exon	TRUE	canonical	3	390	junction_1	128.516496201532	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCCTGTGATCCGTAC	NA	False	NA	-18	True	AATAAA	-18	NA	50101617	50090982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
Isoform_125132_100	chr4	-	2771	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	1	1544	1	-2	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGACTTGTTTGTTAT	-5	True	NA	1	True	AATAAA	-22	NA	25281820	25250148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
Isoform_125134_35	chr4	-	4318	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	1	-3	1	-2	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATGTTATACAGTCT	-5	True	NA	-12	True	AATAAA	-17	NA	25281820	25248601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
Isoform_125143_14	chr4	-	2096	15	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	4	5738	4	-4196	5prime_fragment	FALSE	canonical	3	188	junction_2	18.7215089658709	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGACTTTTTCCAG	-2	True	NA	NA	False	AGTAAA	-20	NA	25281817	25254342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
Isoform_125149_22	chr4	-	2368	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	310	9456	19	110	multi-exon	FALSE	canonical	3	36	junction_2	8.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCTATCTGATCATTT	-10	True	NA	NA	False	AATAAA	-16	NA	25799836	25618787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_25620821_25709027_25709115_25799588
Isoform_125152_3	chr4	-	4486	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	53	7595	53	1971	multi-exon	FALSE	canonical	3	36	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCATATCTCTTATGAAA	0	True	NA	-5	True	AATAAA	-22	NA	25800093	25616926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_25620821_25709027_25709115_25799588
Isoform_125153_3	chr4	-	5226	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	318	6590	27	2976	multi-exon	FALSE	canonical	3	36	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTTGAAACTTCTTAGA	-2	True	NA	NA	False	AATAAA	-19	NA	25799828	25615921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_25620821_25709027_25709115_25799588
Isoform_125155_19	chr4	-	4783	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	293	7058	2	2508	multi-exon	FALSE	canonical	3	36	junction_2	8.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTACTCAGATTTTCTT	-27	True	NA	NA	False	AATAAA	-21	NA	25799853	25616389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_25620821_25709027_25709115_25799588
Isoform_125157_4	chr4	-	4502	5	NIC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	25.7815340893439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAACTGGAAATCTATTC	-5	True	NA	-10	True	AATAAA	-19	NA	26346896	26324511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340635_26346596
Isoform_125158_57	chr4	-	4861	5	FSM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	3	3	3	-3	multi-exon	TRUE	canonical	3	44	junction_4	9.33742469849155	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGGAAATCTATTCATT	3	True	NA	-7	True	AATAAA	-22	NA	26346888	26324508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346596
Isoform_125166_3	chr4	-	4352	15	NIC	ENSMUSG00000040183.14	novel	4444	16	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_10	6.30678287275546	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGTATTCTACTTTT	4	True	NA	-9	True	ATTAAA	-14	NA	32950835	32804036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32950746
Isoform_125168_17	chr4	-	5531	7	FSM	ENSMUSG00000054659.14	ENSMUST00000098181.9	1445	7	-265	-3821	39	3821	multi-exon	FALSE	canonical	3	17	junction_1	3.71558280160133	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCTAAAATGTCT	NA	False	NA	NA	False	ATTAAA	-7	NA	33189698	33170408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_33174481_33174743_33174852_33179204_33179341_33181704_33181860_33183076_33183220_33187047_33187197_33188930
Isoform_125169_5	chr4	-	1324	4	FSM	ENSMUSG00000054659.14	ENSMUST00000119167.2	1339	4	18	-3	18	3	multi-exon	FALSE	canonical	3	23	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTGCTGATTTTTAG	NA	False	NA	NA	False	ATTAAA	-17	NA	33189719	33181616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_33181860_33183076_33183220_33187047_33187197_33188930
Isoform_125170_266	chr4	-	1639	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	2	7	2	-7	multi-exon	FALSE	canonical	3	146	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTAGTCTTGGCTTTTT	1	True	NA	-5	True	TTTAAA	-31	NA	33248508	33245429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_33246508_33247947
Isoform_125171_74	chr4	-	1700	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	-57	5	-57	-5	multi-exon	FALSE	canonical	3	146	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTAGTCTTGGCTTTTTGT	170	False	NA	-3	True	TTTAAA	-33	NA	33248567	33245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_33246508_33247947
Isoform_125178_515	chr4	-	2245	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	21	0	1	0	multi-exon	FALSE	canonical	3	292	junction_6	92.190426792828	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	16	True	NA	-17	True	CATAAA	-21	NA	34614892	34570795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_125180_29	chr4	-	3012	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	21	-767	1	767	multi-exon	FALSE	canonical	3	292	junction_6	92.190426792828	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGTATCCTATAAAAACT	16	True	NA	-29	True	ATTAAA	-18	NA	34614892	34570028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_125187_515	chr4	-	2261	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	39	0	-1	0	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	3	True	NA	-17	True	CATAAA	-21	NA	34614905	34570795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_125188_28	chr4	-	3015	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	52	-767	1	767	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGTATCCTATAAAAACT	16	True	NA	-29	True	ATTAAA	-18	NA	34614892	34570028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_125197_12	chr4	-	2158	9	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	59.0750317393059	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCAGTTACTTTGTT	-19	True	NA	-12	True	AATAAA	-15	NA	34687436	34663255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34673808_34673929_34675029_34675183_34675471_34675632_34683284_34683463_34687243
Isoform_125199_130	chr4	-	2032	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	7	0	7	0	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	-14	True	NA	-13	True	AATAAA	-14	NA	34687431	34663256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
Isoform_125204_3	chr4	-	1714	11	NIC	ENSMUSG00000028294.16	novel	1688	11	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	2.61725046566048	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTTTACTGTGTATT	-18	True	NA	NA	False	ATTAAA	-11	NA	34730212	34711335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_34711596_34714394_34714536_34716304_34716504_34719044_34719165_34719572_34719782_34721415_34721575_34722607_34722797_34724814_34724906_34727904_34727989_34728795_34728909_34730063
Isoform_125205_6	chr4	-	770	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	-7	19	-7	-8	multi-exon	FALSE	canonical	3	19	junction_2	76	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAAAGAATAAAACAAAG	-20	True	NA	NA	False	ACTAAA	-11	NA	34778371	34768682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34769148_34771257_34771415_34778223
Isoform_125206_3	chr4	-	2230	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	-10	-1438	-10	1438	multi-exon	FALSE	canonical	3	19	junction_2	76	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCCAGAAAGACAAACATG	-23	True	NA	NA	False	AATAAA	-23	NA	34778374	34767225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34769148_34771257_34771415_34778223
Isoform_125207_14	chr4	-	2158	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	60	-1432	1	1432	multi-exon	FALSE	canonical	3	160	junction_2	5.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAGCCCCAGAAAGACA	-12	True	NA	NA	False	AATAAA	-17	NA	34778363	34767231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34769148_34771257_34771415_34778278
Isoform_125208_18	chr4	-	750	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	21	15	21	-4	multi-exon	FALSE	canonical	3	160	junction_2	5.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATAAAACAAAGTGGT	NA	False	NA	NA	False	ATTAAA	-3	NA	34778402	34768678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34769148_34771257_34771415_34778278
Isoform_125209_63	chr4	-	699	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	68	19	0	-8	multi-exon	FALSE	canonical	3	160	junction_2	5.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAAAGAATAAAACAAAG	-4	True	NA	NA	False	ACTAAA	-11	NA	34778355	34768682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34769148_34771257_34771415_34778278
Isoform_12521_89	chr11	-	5544	5	FSM	ENSMUSG00000050567.17	ENSMUST00000059458.5	5528	5	-22	6	-22	-6	multi-exon	FALSE	canonical	3	42	junction_4	8.0156097709407	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAATCACAAGCATGTTT	NA	False	NA	-14	True	AATAAA	-16	NA	50183160	50146466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50182552
Isoform_125212_5	chr4	-	2212	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	18	-1444	18	1444	multi-exon	FALSE	canonical	3	160	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGACAAACATGAATGTA	NA	False	NA	NA	False	AATAAA	-29	NA	34778405	34767219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34769148_34771257_34771415_34778278
Isoform_12522_15	chr11	-	5594	5	FSM	ENSMUSG00000050567.17	ENSMUST00000059458.5	5528	5	-69	3	-69	-3	multi-exon	FALSE	canonical	3	42	junction_4	8.0156097709407	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACAAGCATGTTTGAC	NA	False	NA	-11	True	AATAAA	-19	NA	50183207	50146463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50182552
Isoform_125221_72	chr4	-	9948	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	25	13	-5	-13	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTCAACAACTGAATA	6	True	NA	-8	True	AATAAA	-24	NA	34882935	34803125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
Isoform_125226_10	chr4	-	10172	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-4	-10	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	58.5062763727106	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCAACAACTGAATAATG	7	True	NA	-5	True	AATAAA	-27	NA	34882934	34803122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34847810_34848033_34882757
Isoform_125228_28	chr4	-	2382	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	18	3630	18	-3630	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAATGTATTCTTACAGT	-14	True	NA	NA	False	AATAAA	-26	NA	35157466	34952703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
Isoform_125233_9	chr4	-	3356	12	NIC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	34.5947017392801	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	-12	True	NA	-5	True	AATAAA	-16	NA	35225835	35191286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35221880_35222089_35225787
Isoform_125234_146	chr4	-	3119	11	FSM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	74	0	28	0	multi-exon	FALSE	canonical	3	67	junction_8	10.8355895086516	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	17	True	NA	-5	True	AATAAA	-16	NA	35225806	35191286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
Isoform_125236_3	chr4	-	3321	11	NIC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	28.2637577119533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTTTAGTTCATTAT	NA	False	NA	-3	True	AATAAA	-18	NA	35226147	35191284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225928
Isoform_125237_3	chr4	-	2910	10	NIC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	7	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	30.3058483538152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTTCATTATTTAG	-4	True	NA	1	True	AATAAA	-22	NA	35225827	35191280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_35193069_35193184_35193295_35194136_35194195_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
Isoform_125238_105	chr4	-	2455	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	3	1075	3	-3	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTACTTCCAATTCATTC	-6	True	NA	-13	True	AATAAA	-19	NA	40220597	40204851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
Isoform_125240_4	chr4	-	3867	18	FSM	ENSMUSG00000040296.16	ENSMUST00000037907.13	3874	18	5	2	2	-2	multi-exon	FALSE	canonical	0	0	junction_16	34.3834473735139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTTCCAATTCATTCC	-18	True	NA	-12	True	AATAAA	-20	NA	40239823	40204850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398_40220504_40222034_40222198_40223797_40224057_40225039_40225194_40225597_40225706_40226596_40226720_40227965_40228114_40229494_40229677_40235247_40235383_40239590
Isoform_125242_28	chr4	-	3800	2	ISM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	1225	3	1225	-3	3prime_fragment	FALSE	canonical	3	214	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTCTGTGCAACATTG	1188	False	NA	-3	True	AATAAA	-25	NA	40268625	40259603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_40263082_40268303
Isoform_12525_4	chr11	-	5651	6	NNC	ENSMUSG00000050567.17	novel	5528	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	25.7029181222678	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGCATGTTTGACTTC	NA	False	NA	-8	True	AATAAA	-22	NA	50183141	50146460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50181381_50181502_50182552
Isoform_125250_624	chr4	-	3840	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	11	5	11	-5	multi-exon	FALSE	canonical	3	214	junction_1	19	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTTTCTGTGCAACAT	-26	True	NA	-5	True	AATAAA	-23	NA	40269839	40259605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40263082_40268303_40268502_40269673
Isoform_125259_1182	chr4	-	520	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	67	72	55	2	multi-exon	FALSE	canonical	3	2502	junction_3	28.8251433455046	1182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGTCCGTGTTACTGT	6	True	NA	-9	True	AATAAA	-19	NA	40279354	40270662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
Isoform_125265_14	chr4	-	1352	8	FSM	ENSMUSG00000028411.16	ENSMUST00000129021.9	1378	8	26	0	1	0	multi-exon	FALSE	canonical	3	41	junction_6	41.4453168128111	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGATTGTGTAGTAT	9	True	NA	-8	True	AATATA	-17	NA	40703161	40686241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40703136
Isoform_125266_8	chr4	-	1158	8	FSM	ENSMUSG00000028411.16	ENSMUST00000129021.9	1378	8	-8	228	-1	-228	multi-exon	FALSE	canonical	3	41	junction_6	41.4453168128111	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGCTTATTTATTCT	0	True	NA	NA	False	ACTAAA	-16	NA	40703195	40686469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40703136
Isoform_125269_60	chr4	-	1357	8	FSM	ENSMUSG00000028411.16	ENSMUST00000030119.10	5250	8	33	3860	1	0	multi-exon	FALSE	canonical	3	144	junction_6	8.59757915618919	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGATTGTGTAGTAT	9	True	NA	-8	True	AATATA	-17	NA	40703161	40686241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
Isoform_125276_1170	chr4	-	1779	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	65	574	25	-574	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTGCTCATAAGGGGG	-2	True	NA	-13	True	AATAAA	-18	NA	40757858	40737115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_125277_24	chr4	-	2301	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	40	77	0	-77	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTCCAGTCTCTTAT	-27	True	NA	-16	True	AAGAAA	-8	NA	40757883	40736618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_125278_377	chr4	-	1801	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	42	575	2	-575	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGTGCTCATAAGGGG	-25	True	NA	-14	True	AATAAA	-17	NA	40757881	40737116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_125279_58	chr4	-	2281	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	65	72	25	-72	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGTCTCTTATGTATA	-2	True	NA	-11	True	AAGAAA	-13	NA	40757858	40736613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_125280_26	chr4	-	2326	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	79	13	-13	-13	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCTTGAAAATAGGTTC	12	True	NA	48	True	ACTAAA	-21	NA	40757844	40736554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_125285_20	chr4	-	1567	11	NIC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	25	-575	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	388.074168168921	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGTGCTCATAAGGGG	-2	True	NA	-14	True	AATAAA	-17	NA	40757858	40737116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40757776
Isoform_125291_229	chr4	-	3957	6	FSM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	24	2	24	-2	multi-exon	FALSE	canonical	3	127	junction_2	16.0872620417522	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGCTTCTTTTCTTTTT	4	True	NA	-3	True	AATAAA	-16	NA	40853981	40804603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
Isoform_125294_267	chr4	-	3784	6	FSM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	198	1	198	-1	multi-exon	FALSE	canonical	3	127	junction_2	16.0872620417522	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTCTTTTCTTTTTT	735	False	NA	-2	True	AATAAA	-17	NA	40853807	40804602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
Isoform_125297_43	chr4	-	4016	6	FSM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	-35	2	-35	-2	multi-exon	FALSE	canonical	3	127	junction_2	16.0872620417522	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGCTTCTTTTCTTTTT	-8	True	NA	-3	True	AATAAA	-16	NA	40854040	40804603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
Isoform_125299_1856	chr4	-	1325	7	FSM	ENSMUSG00000028416.14	ENSMUST00000191273.7	1348	7	4	19	4	-17	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGACTTGTGTTTTCTCA	19	False	40948309	-26	True	AAAAAG	-20	NA	40948290	40936417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
Isoform_125307_25	chr4	-	2448	8	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	-12	1107	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	724.312763653822	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCGGCTTCAAGGTGCT	3	True	NA	NA	False	NA	NA	NA	40948306	40935290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_40935803_40935822_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
Isoform_125325_2820	chr4	-	1763	6	FSM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	0	2	0	-2	multi-exon	FALSE	canonical	3	1694	junction_1	130.458269189806	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTTTTTGTGTGTGTT	-1	True	NA	-6	True	AATAAA	-19	NA	41098183	41092723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
Isoform_125363_803	chr4	-	4421	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	178	0	178	0	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	27	False	41124289	-4	True	NA	NA	NA	41124277	41114426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
Isoform_125364_312	chr4	-	4451	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	148	0	148	0	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	-3	True	NA	-4	True	NA	NA	NA	41124307	41114426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
Isoform_125365_32	chr4	-	5234	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	178	-813	178	813	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACGGGT	27	False	41124289	NA	False	NA	NA	NA	41124277	41113613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
Isoform_1254_1093	SIRV7	-	427	3	FSM	SIRV7A	SIRV704	428	3	1	0	1	0	multi-exon	FALSE	canonical	3	4944	junction_1	1233	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114737	55849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV7_-_56098_78841_78964_114680
Isoform_125406_1404	chr4	-	4335	29	FSM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	34	-1	15	1	multi-exon	FALSE	canonical	3	748	junction_17	84.4073804080362	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	3	True	NA	-5	True	AATAAA	-13	NA	41275101	41194314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
Isoform_125413_47	chr4	-	4195	28	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_27	174.707288022968	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	5	True	NA	-6	True	AATAAA	-12	NA	41275099	41194315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41275039
Isoform_125419_232	chr4	-	4315	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	1	at_least_one_novel_splicesite	TRUE	canonical	3	182	junction_12	158.993144987642	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	5	True	NA	-5	True	AATAAA	-13	NA	41275099	41194314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
Isoform_125420_25	chr4	-	4351	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_12	158.993144987642	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	218	False	NA	-5	True	AATAAA	-13	NA	41275135	41194314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
Isoform_125423_41	chr4	-	4421	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	16	1	intron_retention	FALSE	canonical	3	748	junction_16	85.5414771164856	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	4	True	NA	-5	True	AATAAA	-13	NA	41275100	41194314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
Isoform_125434_331	chr4	-	3432	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	8	2	8	-2	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	2	True	NA	-2	True	AATAAA	-16	NA	41314881	41291301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
Isoform_125436_785	chr4	-	3370	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	70	2	70	-2	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	17	True	NA	-2	True	AATAAA	-16	NA	41314819	41291301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
Isoform_125454_10	chr4	-	6914	14	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	-7	1122	combination_of_known_junctions	TRUE	canonical	3	20	junction_12	9.0651814539423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTAGGTGTTATTCAT	NA	False	NA	NA	False	AATACA	-24	NA	41464894	41389622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
Isoform_125457_10	chr4	-	6771	13	FSM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	-58	-1120	-11	1120	multi-exon	FALSE	canonical	3	24	junction_12	8.49632273398321	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCCTAGGTGTTATTC	NA	False	NA	NA	False	AATACA	-22	NA	41464898	41389624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
Isoform_125462_19	chr4	-	4244	2	FSM	ENSMUSG00000046312.5	ENSMUST00000149596.2	725	2	371	-3890	371	0	multi-exon	FALSE	canonical	3	10	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTTGTTTTCTTGCT	6669	False	NA	-2	True	NA	NA	NA	41502297	41495603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41499691_41502140
Isoform_125463_43	chr4	-	4233	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-59	-1	-59	1	multi-exon	FALSE	canonical	3	158	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTGTTTTCTTGCTT	5831	False	NA	-1	True	NA	NA	NA	41503135	41495602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41499691_41502990
Isoform_125464_398	chr4	-	4207	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-33	-1	-33	1	multi-exon	FALSE	canonical	3	158	junction_1	0	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTGTTTTCTTGCTT	-25	True	NA	-1	True	NA	NA	NA	41503109	41495602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41499691_41502990
Isoform_125465_4	chr4	-	2108	6	FSM	ENSMUSG00000028439.15	ENSMUST00000108052.10	3357	6	1	1248	1	-1248	multi-exon	FALSE	canonical	0	0	junction_3	1.49666295470958	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTTTTCATACCAGAAG	-10	True	NA	NA	False	NA	NA	NA	41569536	41518938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41520399_41520911_41520967_41521611_41521693_41521866_41521970_41524365_41524415_41569176
Isoform_125467_256	chr4	-	832	2	FSM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	23	1	23	-1	multi-exon	FALSE	canonical	3	191	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGGCCTGTTGTGTAA	-2	True	NA	-18	True	AATAAA	-13	NA	41713511	41712033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41712815_41713460
Isoform_125468_7	chr4	-	736	6	FSM	ENSMUSG00000028447.12	ENSMUST00000171641.2	885	6	-4	153	3	-153	multi-exon	FALSE	canonical	3	44	junction_1	342.598657323697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGCCTGTTGGCCTG	-13	True	NA	NA	False	AATAAA	-14	NA	41723167	41714950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41715239_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
Isoform_125469_651	chr4	-	814	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	8	151	1	-151	multi-exon	FALSE	canonical	3	869	junction_5	34.1829229619443	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGCCTGTTGGCCTGCT	-8	True	NA	NA	False	AATAAA	-16	NA	41723162	41714948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
Isoform_125470_9	chr4	-	953	8	NNC	ENSMUSG00000028447.12	novel	973	7	NA	NA	10	-153	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	400.02408090779	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGCCTGTTGGCCTG	1	True	NA	NA	False	AATAAA	-14	NA	41723153	41714950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_41715260_41715395_41715456_41716395_41716455_41716968_41717119_41717356_41717441_41719836_41719924_41720782_41720868_41723034
Isoform_125472_724	chr4	-	1593	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	40	7	1	-7	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTCGTTTCCTTATG	4	True	NA	NA	False	AATAAA	-10	NA	41741319	41738499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
Isoform_125473_132	chr4	-	1631	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	2	7	2	-7	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTCGTTTCCTTATG	3749	False	NA	NA	False	AATAAA	-10	NA	41741357	41738499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
Isoform_125475_33	chr4	-	1561	4	NIC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	247.10906274131	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGTTTCCTTATGTGTC	-7	True	NA	NA	False	AATAAA	-14	NA	41741330	41738495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_41739581_41740549_41740643_41740822_41740977_41741101
Isoform_125480_5	chr4	-	491	4	FSM	ENSMUSG00000073888.14	ENSMUST00000136768.8	556	4	52	13	-12	-2	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCTCCAAAAACTTCCGT	621	False	NA	-8	True	AATAAA	-15	NA	41773549	41769479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464
Isoform_125481_13	chr4	-	593	6	FSM	ENSMUSG00000073888.14	ENSMUST00000108037.9	590	6	-14	11	2	0	multi-exon	FALSE	canonical	3	53	junction_3	16.7020956768904	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCCAAAAACTTCCGTCT	14	False	NA	-6	True	AATAAA	-17	NA	41774156	41769477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464_41773525_41773735_41773804_41774099
Isoform_125482_9	chr4	-	2833	5	NIC	ENSMUSG00000073888.14	novel	590	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	80	junction_4	9.06917857360853	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCCAAAAACTTCCGTCT	3	True	NA	-6	True	AATAAA	-17	NA	41774167	41769477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_41769655_41769843_41769977_41771137_41773525_41773735_41773804_41774099
Isoform_125483_4	chr4	-	3057	4	NIC	ENSMUSG00000073888.14	novel	590	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	80	junction_3	9.20144916122817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	1	True	NA	5	True	AATAAA	-28	NA	41774169	41769466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_41769655_41769843_41769977_41771137_41773804_41774099
Isoform_125522_3348	chr4	-	2888	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	73	355	-1	-355	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	3348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAAGAGTGAATTACCAG	1	True	NA	-4	True	AATAAA	-19	NA	43000434	42980317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
Isoform_125524_1163	chr4	-	2926	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	33	357	33	-357	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGAAGAGTGAATTACC	-6	True	NA	-6	True	AATAAA	-17	NA	43000474	42980319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
Isoform_125525_1176	chr4	-	3241	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	75	0	1	0	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	0	True	NA	-15	True	AATAAA	-18	NA	43000432	42979962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
Isoform_125526_69	chr4	-	2960	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	-2	358	-2	-358	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGTGAAGAGTGAATTAC	10009	False	NA	-7	True	AATAAA	-16	NA	43000509	42980320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
Isoform_125542_4	chr4	-	2894	13	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-45	2	intron_retention	FALSE	canonical	1	5	junction_5	34.5418425809755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTGTATGTGTGTGTG	-19	True	NA	-4	True	ATTAAA	-18	NA	43010267	43002340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005009_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
Isoform_125545_218	chr4	-	2668	14	FSM	ENSMUSG00000028453.11	ENSMUST00000030165.5	2771	14	103	0	-30	0	multi-exon	FALSE	canonical	3	78	junction_11	17.9578731229673	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	-4	True	NA	-6	True	ATTAAA	-16	NA	43010252	43002342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
Isoform_125547_11	chr4	-	2941	14	FSM	ENSMUSG00000028453.11	ENSMUST00000030165.5	2771	14	-171	1	-20	-1	multi-exon	FALSE	canonical	3	78	junction_11	17.9578731229673	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	-8	True	NA	-7	True	ATTAAA	-15	NA	43010526	43002343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
Isoform_125548_18	chr4	-	2704	14	FSM	ENSMUSG00000028453.11	ENSMUST00000030165.5	2771	14	67	0	-66	0	multi-exon	FALSE	canonical	3	78	junction_11	17.9578731229673	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	230	False	NA	-6	True	ATTAAA	-16	NA	43010288	43002342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
Isoform_125549_14	chr4	-	2633	15	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	59	4	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	28.3574127371109	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATGTGTGTGTGTG	222	False	NA	-2	True	ATTAAA	-20	NA	43010296	43002338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
Isoform_125550_14	chr4	-	2882	15	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-42	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	28.3574127371109	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATGTGTGTGT	NA	False	NA	-5	True	ATTAAA	-17	NA	43010548	43002341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
Isoform_125553_8	chr4	-	2542	13	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-38	-2	intron_retention	FALSE	canonical	0	0	junction_11	36.250191570375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTGTATGTGTG	-12	True	NA	-8	True	ATTAAA	-14	NA	43010260	43002344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009706_43009801_43010001
Isoform_125554_20	chr4	-	2902	13	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-30	0	intron_retention	FALSE	canonical	3	92	junction_5	14.74482018277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	-4	True	NA	-6	True	ATTAAA	-16	NA	43010252	43002342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
Isoform_125555_7	chr4	-	942	4	ISM	ENSMUSG00000028454.17	ENSMUST00000149333.8	2312	11	5189	2	-185	-2	3prime_fragment	FALSE	canonical	3	191	junction_2	7.31816613336672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	5921	False	NA	-9	True	AATAAA	-19	NA	43019891	43017636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646
Isoform_125557_4	chr4	-	3995	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	20	-4	intron_retention	FALSE	canonical	3	19	junction_4	61.1480989074885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTAGCTAAGATCTGT	13	True	NA	-11	True	AATAAA	-17	NA	43025799	43017638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019782_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
Isoform_125558_24	chr4	-	3504	11	FSM	ENSMUSG00000028454.17	ENSMUST00000067481.6	3525	11	19	2	19	-2	multi-exon	FALSE	canonical	3	19	junction_4	53.2560794651653	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	12	True	NA	-9	True	AATAAA	-19	NA	43025800	43017636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019782_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
Isoform_125568_95	chr4	-	3558	10	FSM	ENSMUSG00000028454.17	ENSMUST00000098109.9	4239	10	678	3	2	-3	multi-exon	FALSE	canonical	3	131	junction_4	26.4280995238864	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	6353	False	NA	-10	True	AATAAA	-18	NA	43025078	43017637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
Isoform_125570_21	chr4	-	4260	10	FSM	ENSMUSG00000028454.17	ENSMUST00000098109.9	4239	10	-23	2	-23	-2	multi-exon	FALSE	canonical	3	131	junction_4	26.4280995238864	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	-3	True	NA	-9	True	AATAAA	-19	NA	43025779	43017636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
Isoform_125571_58	chr4	-	4049	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	30	junction_10	46.9541265492182	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	-3	True	NA	-9	True	AATAAA	-19	NA	43025779	43017636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
Isoform_125574_4	chr4	-	4277	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-9	671	intron_retention	FALSE	canonical	3	84	junction_10	34.3634980757198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGCTAATGATTTTCT	-16	True	NA	NA	False	NA	NA	NA	43025828	43016963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
Isoform_125576_3	chr4	-	3675	12	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	18	-4	intron_retention	FALSE	canonical	1	1	junction_7	67.1893832620935	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTAGCTAAGATCTGT	11	True	NA	-11	True	AATAAA	-17	NA	43025801	43017638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43022842_43022943_43023369_43023494_43023671_43023816_43024562_43025075_43025779
Isoform_125577_4	chr4	-	3791	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-4	intron_retention	FALSE	canonical	3	84	junction_9	35.3490531069158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTAGCTAAGATCTGT	12	True	NA	-11	True	AATAAA	-17	NA	43025800	43017638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
Isoform_125580_9	chr4	-	3579	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-3	intron_retention	FALSE	canonical	3	11	junction_3	52.6482668280733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	12	True	NA	-10	True	AATAAA	-18	NA	43025800	43017637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
Isoform_125581_4	chr4	-	4465	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-23	-3	intron_retention	FALSE	canonical	3	11	junction_3	63.2473099998903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	-3	True	NA	-10	True	AATAAA	-18	NA	43025779	43017637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
Isoform_125591_4783	chr4	-	1234	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	309	331	-31	5	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	4783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCCTCATTGATTGGG	1	True	NA	-2	True	AATAAA	-21	NA	43031401	43028020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
Isoform_125593_755	chr4	-	1300	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	243	331	-11	5	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCCTCATTGATTGGG	8832	False	NA	-2	True	AATAAA	-21	NA	43031467	43028020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
Isoform_125595_77	chr4	-	1559	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	309	6	-31	-6	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTTGAGAGATGGCT	1	True	NA	-10	True	AATAAA	-13	NA	43031401	43027695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
Isoform_125608_10	chr4	-	3298	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107958.8	3280	9	-26	8	-19	-8	multi-exon	FALSE	canonical	3	8	junction_8	13.7636296085008	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAACTAACCTCTACT	-15	True	NA	-6	True	AATAAA	-13	NA	43040314	43032421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43039965
Isoform_125609_9	chr4	-	2987	9	NIC	ENSMUSG00000036002.13	novel	3060	10	NA	NA	-9	-1	combination_of_known_splicesites	TRUE	canonical	2	2	junction_8	15.5724115023974	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACCTCTACTTTTTTTT	-5	True	NA	1	True	AATAAA	-20	NA	43040304	43032414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43040273
Isoform_125611_64	chr4	-	3059	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107956.8	3107	9	47	1	9	-1	multi-exon	FALSE	canonical	3	38	junction_5	6.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACCTCTACTTTTTTTT	456	False	NA	1	True	AATAAA	-20	NA	43045750	43032414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
Isoform_125612_8	chr4	-	3121	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107956.8	3107	9	-15	1	13	-1	multi-exon	FALSE	canonical	3	38	junction_5	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACCTCTACTTTTTTTT	394	False	NA	1	True	AATAAA	-20	NA	43045812	43032414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
Isoform_125613_160	chr4	-	1622	9	FSM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	34	3	0	1	multi-exon	FALSE	canonical	3	105	junction_3	13.833270582187	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTTCCTGTCTAAATC	-14	True	NA	-6	True	AATAAA	-15	NA	43499661	43496144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
Isoform_125614_7	chr4	-	1856	8	FSM	ENSMUSG00000051517.15	ENSMUST00000125834.8	1508	8	30	-378	-12	0	multi-exon	FALSE	canonical	3	106	junction_5	13.3248272186983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	16	True	NA	-7	True	AATAAA	-14	NA	43499631	43496145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43496721_43496820_43496910_43497086_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
Isoform_125615_31	chr4	-	2133	7	NIC	ENSMUSG00000051517.15	novel	1508	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	106	junction_4	12.5088857306405	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCCTTCCTGTCTAAA	-14	True	NA	-8	True	AATAAA	-13	NA	43499661	43496146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43496721_43496820_43496910_43497086_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
Isoform_125616_4	chr4	-	2299	6	NIC	ENSMUSG00000051517.15	novel	1508	8	NA	NA	12	0	intron_retention	FALSE	canonical	3	106	junction_3	13.6733317081098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	-2	True	NA	-7	True	AATAAA	-14	NA	43499649	43496145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43496721_43496820_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
Isoform_125617_11	chr4	-	1033	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	131	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.31503239718152	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	-1	True	NA	-14	True	AATAAA	-16	NA	43523464	43514710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
Isoform_125618_6	chr4	-	1130	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	34	0	34	0	multi-exon	FALSE	canonical	3	13	junction_1	2.31503239718152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	9803	False	NA	-14	True	AATAAA	-16	NA	43523561	43514710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
Isoform_125625_5	chr4	-	2398	15	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	9807	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	72.3796679084024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCAGCCTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-11	NA	43537840	43531519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_43532086_43532191_43532333_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787
Isoform_125656_35	chr4	-	8475	57	FSM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	-82	0	-82	0	multi-exon	FALSE	canonical	2	114	junction_34	45.4919257244893	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	11	False	NA	-6	True	AATAAA	-12	NA	43562504	43531518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
Isoform_125657_56	chr4	-	8375	57	FSM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	19	-1	19	1	multi-exon	FALSE	canonical	2	114	junction_34	45.4919257244893	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	10	True	NA	-5	True	AATAAA	-13	NA	43562403	43531517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
Isoform_125661_6	chr4	-	8546	57	FSM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	-153	0	116	0	multi-exon	FALSE	canonical	2	114	junction_34	45.4919257244893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	NA	False	NA	-6	True	AATAAA	-12	NA	43562575	43531518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
Isoform_125669_7	chr4	-	735	2	FSM	ENSMUSG00000028465.17	ENSMUST00000123985.2	937	2	199	3	-70	-3	multi-exon	FALSE	canonical	3	68	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATCTTCATATTTTTA	-5	True	NA	-33	True	NA	NA	NA	43562492	43559345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43559718_43562129
Isoform_125673_5	chr4	-	3521	17	NIC	ENSMUSG00000028467.16	novel	3544	17	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	15.5853246276746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGTTAGTGTGGTGTG	5	True	NA	-7	True	AATAAA	-10	NA	43578861	43566933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570907_43571188_43571408_43573750_43573867_43574027_43574120_43578015
Isoform_125675_138	chr4	-	3514	17	FSM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	24	6	24	-5	multi-exon	FALSE	canonical	3	32	junction_8	9.51314879522022	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGTTAGTGTGGTGTG	17	True	NA	-7	True	AATAAA	-10	NA	43578849	43566933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
Isoform_125678_506	chr4	-	596	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	15	-1	-3	0	multi-exon	FALSE	canonical	3	693	junction_3	25.1433390781734	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATCCCTGTCTTAA	3	True	NA	-6	True	AATAAA	-15	NA	43656451	43654227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
Isoform_125680_7	chr4	-	717	4	NIC	ENSMUSG00000028470.11	novel	610	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	693	junction_2	26.0426999794995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTGTATCCCTGTCT	9	True	NA	-9	True	AATAAA	-12	NA	43656445	43654230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_43654412_43654512_43654821_43654905_43655047_43656358
Isoform_125681_9	chr4	-	607	5	FSM	ENSMUSG00000028470.11	ENSMUST00000151238.8	600	5	-8	1	-3	0	multi-exon	FALSE	canonical	3	13	junction_1	305.186316043167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATCCCTGTCTTAA	3	True	NA	-6	True	AATAAA	-15	NA	43656451	43654227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_43654423_43654512_43654586_43654715_43654821_43654905_43655047_43656358
Isoform_125682_5	chr4	-	2865	13	NIC	ENSMUSG00000028479.19	novel	2920	12	NA	NA	-48	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	21.6082545955629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAAACTTGATATCTG	-37	True	NA	-15	True	NA	NA	NA	44072672	44036834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44063086_44063147_44066754_44066961_44072361
Isoform_125683_12	chr4	-	2630	11	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	5689	2	-28	2	3prime_fragment	FALSE	canonical	3	48	junction_9	6.87095335452075	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGATATCTGGTCCCAG	5929	False	NA	-8	True	NA	NA	NA	44067089	44036827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754
Isoform_125684_151	chr4	-	2813	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	105	2	-49	2	multi-exon	FALSE	canonical	3	48	junction_9	6.79693659727954	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGATATCTGGTCCCAG	-38	True	NA	-8	True	NA	NA	NA	44072673	44036827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
Isoform_125685_21	chr4	-	2868	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	50	2	8	2	multi-exon	FALSE	canonical	3	48	junction_9	6.79693659727954	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGATATCTGGTCCCAG	-7	True	NA	-8	True	NA	NA	NA	44072728	44036827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
Isoform_125686_4	chr4	-	1311	4	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	129	18167	-25	312	5prime_fragment	FALSE	canonical	3	48	junction_1	9.97775303139718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATCTCGCCGGGTGCAG	-14	True	NA	NA	False	AATAAA	-10	NA	44072649	44054992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_44055358_44059775_44060228_44066754_44066961_44072361
Isoform_125687_32	chr4	-	3037	3	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	146	20842	-8	2032	5prime_fragment	FALSE	canonical	3	64	junction_2	4	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTGTGTCTATGT	3	True	NA	NA	False	AATAAA	-27	NA	44072632	44057667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_44060228_44066754_44066961_44072361
Isoform_125688_7	chr4	-	3143	3	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	33	20849	-9	2025	5prime_fragment	FALSE	canonical	3	64	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTTATTTTGTGTGTG	273	False	NA	NA	False	AATAAA	-20	NA	44072745	44057674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_44060228_44066754_44066961_44072361
Isoform_125690_7	chr4	-	5244	12	FSM	ENSMUSG00000035696.16	ENSMUST00000102934.9	5240	12	-7	3	-7	-3	multi-exon	FALSE	canonical	3	13	junction_10	22.7367253069995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	-18	True	NA	-8	True	AATAAA	-18	NA	44167958	44126217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167626
Isoform_125691_9	chr4	-	5128	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	22.9112553090116	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	-4	True	NA	-8	True	AATAAA	-18	NA	44167944	44126217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44159004_44159053_44167626
Isoform_125692_4	chr4	-	5050	11	FSM	ENSMUSG00000035696.16	ENSMUST00000098098.9	5061	11	5	6	5	-1	multi-exon	FALSE	canonical	2	7	junction_10	20.7749849578766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAAGTCGTGTTTCATGT	-9	True	NA	-6	True	AATAAA	-20	NA	44167603	44126215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167317
Isoform_125693_4	chr4	-	5224	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_10	21.5455331797568	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCGTGTTTCATGTAAG	18	True	NA	-3	True	AATAAA	-23	NA	44167922	44126212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167465
Isoform_125695_33	chr4	-	5055	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	15.9874951133691	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	21	True	NA	-8	True	AATAAA	-18	NA	44167919	44126217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
Isoform_125696_11	chr4	-	5160	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	15.9874951133691	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTAAGTCGTGTTTCATG	20	True	NA	-7	True	AATAAA	-19	NA	44168023	44126216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
Isoform_125697_4	chr4	-	5219	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	15.9874951133691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	1187	False	NA	-5	True	AATAAA	-21	NA	44168080	44126214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
Isoform_125698_6	chr4	-	4797	11	NIC	ENSMUSG00000035696.16	novel	5012	12	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	22.5878285808973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTAAGTCGTGTTTCATG	2	True	NA	-7	True	AATAAA	-19	NA	44168276	44126216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44168242
Isoform_125701_10	chr4	-	5374	2	FSM	ENSMUSG00000049657.10	ENSMUST00000107817.3	3867	2	230	-1737	-37	1	multi-exon	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACACGGTCTCCTTTGCT	124	False	NA	-2	True	ATTAAA	-24	NA	45012182	44991243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44995387_45010951
Isoform_125702_3	chr4	-	4448	2	FSM	ENSMUSG00000049657.10	ENSMUST00000180217.2	4708	2	261	-1	-6	1	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACACGGTCTCCTTTGCT	-25	True	NA	-2	True	ATTAAA	-24	NA	45012151	44991243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44995387_45011846
Isoform_125703_13	chr4	-	2539	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	25	1752	25	-13	multi-exon	FALSE	canonical	3	11	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGCCCTG	NA	False	NA	NA	False	NA	NA	NA	45012369	44992993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44995387_45012223
Isoform_125704_11	chr4	-	2614	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	-50	1752	-32	-13	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGCCCTG	NA	False	NA	NA	False	NA	NA	NA	45012444	44992993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44995387_45012223
Isoform_125705_8	chr4	-	4352	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	-39	3	-21	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACACGGTCTCCTTTGC	NA	False	NA	-3	True	ATTAAA	-23	NA	45012433	44991244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44995387_45012223
Isoform_125708_117	chr4	-	4619	11	FSM	ENSMUSG00000048232.13	ENSMUST00000052236.13	4635	11	10	6	10	-5	multi-exon	FALSE	canonical	3	26	junction_8	5.25737577123797	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGGTGCTTCTGGGGTC	-24	True	NA	-6	True	AATAAA	-14	NA	45084594	45034252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45036083_45040525_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328_45059151_45061939_45062531_45084489
Isoform_125709_3	chr4	-	2941	10	ISM	ENSMUSG00000048232.13	ENSMUST00000052236.13	4635	11	9	6128	9	5913	5prime_fragment	FALSE	canonical	3	26	junction_7	5.51988548816632	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTGCTTGTGAGCGGC	-25	True	NA	NA	False	NA	NA	NA	45084595	45040374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328_45059151_45061939_45062531_45084489
Isoform_125711_39	chr4	-	681	3	FSM	ENSMUSG00000078713.9	ENSMUST00000107808.3	679	3	-1	-1	-1	1	multi-exon	FALSE	canonical	3	56	junction_2	2	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTGGTTTTGTGTTTTT	-11	True	NA	NA	False	AATAAA	-15	NA	45108109	45105210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45105645_45106838_45106889_45107912
Isoform_125713_885	chr4	-	623	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	13	3	7	1	multi-exon	FALSE	canonical	3	2176	junction_1	0	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTGGTTTTGTGTTTTT	-3	True	NA	NA	False	AATAAA	-15	NA	45108101	45105210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45105645_45107912
Isoform_125716_256	chr4	-	995	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	10	72	10	-72	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTTGTCAATCATGTA	-12	True	NA	-1	True	AATAAA	-17	NA	45320619	45316684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
Isoform_125717_240	chr4	-	1049	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	10	18	10	-18	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTTGGTAGTGTCTA	-12	True	NA	-19	True	TATAAA	-16	NA	45320619	45316630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
Isoform_125721_171	chr4	-	1932	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	2	2499	1	819	multi-exon	FALSE	canonical	3	68	junction_2	5.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	-15	True	NA	NA	False	AATAAA	-19	NA	45408759	45398421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45400180_45404726_45404836_45408694
Isoform_125722_3	chr4	-	2060	3	FSM	ENSMUSG00000045973.19	ENSMUST00000116341.4	4438	3	-121	2499	-121	819	multi-exon	FALSE	canonical	3	68	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	5	True	NA	NA	False	AATAAA	-19	NA	45408887	45398421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45400180_45404726_45404836_45408694
Isoform_125723_9	chr4	-	4289	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	2	142	1	-142	multi-exon	FALSE	canonical	3	68	junction_2	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTCTCTCTAGATTT	-15	True	NA	-3	True	AATAAA	-18	NA	45408759	45396064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45400180_45404726_45404836_45408694
Isoform_125724_3	chr4	-	4420	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	13	0	12	0	multi-exon	FALSE	canonical	3	68	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTTGCTCTTTGGAG	-4	True	NA	1	True	ATTAAA	-17	NA	45408748	45395922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45400180_45404726_45404836_45408694
Isoform_125725_9	chr4	-	1798	2	FSM	ENSMUSG00000045973.19	ENSMUST00000132815.3	1005	2	26	-819	1	819	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	10	True	NA	NA	False	AATAAA	-19	NA	45408734	45398421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45400180_45408694
Isoform_125726_250	chr4	-	2718	6	FSM	ENSMUSG00000044813.16	ENSMUST00000061986.12	2244	6	-474	0	-474	0	multi-exon	FALSE	canonical	3	103	junction_2	2.71293199325011	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTAGTCGGGTTTTTT	-20	True	NA	NA	False	AATAAA	-17	NA	45530804	45423277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45489054_45489176_45529561
Isoform_125731_4	chr4	-	2799	7	NNC	ENSMUSG00000044813.16	novel	2244	6	NA	NA	-462	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	50.2651303920853	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTAGTCGGGTTTTTT	-8	True	NA	NA	False	AATAAA	-17	NA	45530792	45423277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45458762_45458856_45489054_45489176_45529561
Isoform_125732_70	chr4	-	3683	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107770.2	2700	10	1	-984	1	-2	multi-exon	FALSE	canonical	3	38	junction_9	51.5344784502162	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGGTGGGAAGAGTGCT	-6	True	NA	-5	True	AATAAA	-23	NA	46138437	46114747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135592_46138379
Isoform_125735_339	chr4	-	3703	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	21	2	1	-2	multi-exon	FALSE	canonical	3	146	junction_3	21.9291789378647	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGGTGGGAAGAGTGCT	-23	True	NA	-5	True	AATAAA	-23	NA	46138454	46114747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
Isoform_125737_12	chr4	-	3836	10	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	59.1553719005414	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	-2	True	NA	-6	True	AATAAA	-22	NA	46138700	46114748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138491
Isoform_125738_8	chr4	-	3494	9	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	1	-3	combination_of_known_splicesites	TRUE	canonical	2	6	junction_8	64.5402006504473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	-23	True	NA	-6	True	AATAAA	-22	NA	46138454	46114748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46138379
Isoform_125740_9	chr4	-	3613	10	NNC	ENSMUSG00000035495.16	novel	2700	10	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	67.8917075246844	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	-23	True	NA	-6	True	AATAAA	-22	NA	46138454	46114748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135592_46138379
Isoform_125741_56	chr4	-	3618	10	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	52.704627669473	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGGTGGGAAGAGTGCT	-24	True	NA	-5	True	AATAAA	-23	NA	46138455	46114747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
Isoform_125746_3	chr4	-	1256	6	FSM	ENSMUSG00000028329.14	ENSMUST00000058232.11	1241	6	-12	-3	-12	3	multi-exon	FALSE	canonical	2	4	junction_1	31.2064095980297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAACAAGAGTATGTTAT	-8	True	NA	NA	False	AATAAA	-22	NA	46196323	46155343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_46155827_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
Isoform_125747_63	chr4	-	953	6	FSM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	2	0	2	0	multi-exon	FALSE	canonical	3	75	junction_2	5.6	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGATGCAGTCTTCACAGA	6	True	NA	-1	True	AATAAA	-18	NA	46196309	46175221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_46175416_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
Isoform_125749_87	chr4	-	1465	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	2	60	2	-60	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTATATTCTTTTTTAA	-12	True	NA	NA	False	NA	NA	NA	46389435	46379923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
Isoform_125750_38	chr4	-	1523	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	2	2	2	-2	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTCTGAGCTTTGA	-12	True	NA	NA	False	ATTAAA	-25	NA	46389435	46379865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
Isoform_125751_12	chr4	-	4332	13	FSM	ENSMUSG00000039813.15	ENSMUST00000084621.12	4315	13	-19	2	-19	-2	multi-exon	TRUE	canonical	2	8	junction_12	4.63381292481928	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGTGTCTGGGCTGCCT	-33	True	NA	-1	True	AATAAA	-13	NA	46650228	46604391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46646116_46646259_46649668
Isoform_125752_15	chr4	-	4219	13	FSM	ENSMUSG00000039813.15	ENSMUST00000084621.12	4315	13	89	7	89	-7	multi-exon	FALSE	canonical	2	8	junction_12	4.63381292481928	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGATGAGTGTCTGGGC	-7	True	NA	-6	True	AATAAA	-8	NA	46650120	46604396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46646116_46646259_46649668
Isoform_125754_6	chr4	-	3764	16	FSM	ENSMUSG00000066191.13	ENSMUST00000229609.2	3438	16	108	-434	-13	-5	multi-exon	FALSE	canonical	1	1	junction_8	1.85711843695788	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCCCTGAGTTTGTG	7	True	NA	NA	False	ATTAAA	-9	NA	47057319	47015693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_47016817_47017522_47017620_47023743_47023861_47025685_47025754_47027100_47027285_47030663_47030852_47033115_47033270_47035715_47035920_47038913_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47049068_47049572_47056948
Isoform_125755_13	chr4	-	2910	2	FSM	ENSMUSG00000039740.7	ENSMUST00000143104.2	531	2	-320	-2059	36	-2	multi-exon	FALSE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCAGTTTATGGTTG	19	True	NA	-4	True	AATAAA	-13	NA	47474297	47469834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_47472386_47473938
Isoform_125756_440	chr4	-	2985	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	36	0	36	0	multi-exon	FALSE	canonical	3	118	junction_1	0	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCAGTTTATGGTTGCG	19	True	NA	-2	True	AATAAA	-15	NA	47474297	47469832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_47472459_47473938
Isoform_125757_65	chr4	-	3046	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	-27	2	-27	-2	multi-exon	FALSE	canonical	3	118	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCAGTTTATGGTTG	NA	False	NA	-4	True	AATAAA	-13	NA	47474360	47469834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_47472459_47473938
Isoform_125762_67	chr4	-	2647	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-33	10	-33	-10	multi-exon	FALSE	canonical	3	625	junction_9	43.7020339182862	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATAACTATCAGCTT	-13	True	NA	NA	False	AATAAA	-19	NA	48279591	48193332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
Isoform_125767_165	chr4	-	1476	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-10	1158	-10	9	multi-exon	FALSE	canonical	3	625	junction_9	43.7020339182862	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCCTCCCCCTGA	10	True	NA	-19	True	AATAAA	-23	NA	48279568	48194480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
Isoform_125769_82	chr4	-	2624	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-10	10	-10	-10	multi-exon	TRUE	canonical	3	625	junction_9	43.7020339182862	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATAACTATCAGCTT	10	True	NA	NA	False	AATAAA	-19	NA	48279568	48193332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
Isoform_125771_7	chr4	-	1596	13	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-3	8	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	255.833876220922	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTTTCCTCCCCCTG	17	True	NA	-20	True	AATAAA	-22	NA	48279561	48194481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48238238_48238367_48241295_48241336_48243476_48243550_48279383
Isoform_125772_6	chr4	-	2523	11	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-25	-10	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	206.167019670945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATAACTATCAGCTT	-5	True	NA	NA	False	AATAAA	-19	NA	48279583	48193332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48241295_48241336_48243476_48243550_48279383
Isoform_125781_82	chr4	-	3106	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	-9	5	-9	-5	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTCATGAGCTTCCT	NA	False	NA	-8	True	ATTAAA	-13	NA	48473468	48430862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
Isoform_125782_1430	chr4	-	3062	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	35	5	-2	-5	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTCATGAGCTTCCT	6	True	NA	-8	True	ATTAAA	-13	NA	48473424	48430862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
Isoform_125783_45	chr4	-	3117	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	47	-62	10	62	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTTGCCTGGAATAGT	18	True	NA	59	True	AATAAA	-25	NA	48473412	48430795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
Isoform_125784_36	chr4	-	6188	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	47	-3133	10	3133	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAATGAATGTTAAAGTT	18	True	NA	7	True	ATTAAA	-38	NA	48473412	48427724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
Isoform_125790_32	chr4	-	3312	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_14	171.623282279556	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTCATGAGCTTCCT	2	True	NA	-8	True	ATTAAA	-13	NA	48473428	48430862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
Isoform_125792_43	chr4	-	2577	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTCATGAGCTTCCT	18	True	NA	-8	True	ATTAAA	-13	NA	48473412	48430862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
Isoform_125793_42	chr4	-	2607	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATGAGCTTCCTTCAT	-8	True	NA	-4	True	ATTAAA	-17	NA	48473438	48430858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
Isoform_125800_963	chr4	-	2094	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	16	4	16	-4	multi-exon	FALSE	canonical	3	1281	junction_1	0	963	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTAAGTTTTAAAGTGT	-15	True	NA	-4	True	AATAAA	-17	NA	49521077	49512599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_49514578_49520961
Isoform_125806_3	chr4	-	10256	50	FSM	ENSMUSG00000015243.5	ENSMUST00000030010.4	10262	50	2	4	2	-4	multi-exon	FALSE	canonical	2	9	junction_41	9.14791223225713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACAAAGTTCCTTTTG	-1	True	NA	-7	True	AATAAA	-20	NA	53159893	53030790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53159675
Isoform_12582_1053	chr11	-	3760	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	13	6	13	-6	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACATGTCTGCAGG	8149	False	NA	-60	True	AATAAA	-16	NA	50216487	50185299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
Isoform_12584_3249	chr11	-	3714	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	59	6	59	-6	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	3249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACATGTCTGCAGG	8195	False	NA	-60	True	AATAAA	-16	NA	50216441	50185299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
Isoform_125845_2460	chr4	-	3038	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-11	2	-11	-2	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	2460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGACAATCTCTTTGTTTT	-2	True	NA	-9	True	AATAAA	-19	NA	55532477	55527144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
Isoform_125850_127	chr4	-	3067	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-39	1	-39	-1	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACAATCTCTTTGTTTTT	821	False	NA	-8	True	AATAAA	-20	NA	55532505	55527143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
Isoform_125887_294	chr4	-	4804	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	32	1324	32	8	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTGGTAAAGAGCGGT	-6	True	NA	-10	True	AATAAA	-26	NA	56802299	56751003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
Isoform_125889_82	chr4	-	5021	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	44	1095	44	237	multi-exon	TRUE	canonical	3	245	junction_24	36.3764927995411	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTTATGTGCTACTAGC	6	True	NA	-7	True	ATTAAA	-13	NA	56802287	56750774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
Isoform_125901_17	chr4	-	4671	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	44	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	63.153586677275	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGACTCAGTGGTAAA	6	True	NA	-17	True	AATAAA	-19	NA	56802287	56751010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
Isoform_125908_117	chr4	-	3381	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATACCGACTGGCTTA	-8	True	NA	-8	True	AATAAA	-19	NA	56846084	56810936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
Isoform_125909_286	chr4	-	3672	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-9	1	-9	-1	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATACCGACTGGCTTAA	-26	True	NA	-7	True	AATAAA	-20	NA	56865197	56810935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
Isoform_125916_13	chr4	-	1653	10	NIC	ENSMUSG00000038816.15	novel	1956	12	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	86	junction_9	65.1103526690753	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATTTCCTACTGAAA	-7	True	NA	NA	False	AATAAA	-20	NA	56846083	56826000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
Isoform_125918_13	chr4	-	1938	11	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-3	15066	-3	2	5prime_fragment	FALSE	canonical	3	197	junction_7	32.0661815625122	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATTTCCTACTGAAA	-20	True	NA	NA	False	AATAAA	-20	NA	56865191	56826000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
Isoform_125924_9	chr4	-	6016	19	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-5	3063	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.587831661031	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTCTTCATTTCCTTG	0	True	NA	NA	False	NA	NA	NA	56947429	56876812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_56878805_56878824_56879092_56879114_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
Isoform_125926_20	chr4	-	5747	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-5	2751	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTTTCGGAACTCAAA	0	True	NA	-17	True	NA	NA	NA	56947429	56877124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
Isoform_125927_11	chr4	-	4374	19	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-4	1422	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.587831661031	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATATTGTGATAAGTTT	1	True	NA	NA	False	ATTAAA	-35	NA	56947428	56878453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_56878805_56878824_56879092_56879114_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
Isoform_125930_3	chr4	-	3377	11	NIC	ENSMUSG00000055296.15	novel	3576	17	NA	NA	-4	-16763	intron_retention	FALSE	canonical	3	49	junction_7	10.3658091821141	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCACAGACTCAGTGTA	1	True	NA	NA	False	AATAAA	-13	NA	56947428	56902378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
Isoform_125934_3	chr4	-	4243	25	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-231	1089	combination_of_known_splicesites	TRUE	canonical	3	20	junction_2	61.2422188935052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAATCCTTCTCTTGG	84	False	NA	NA	False	NA	NA	NA	57143668	56994588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
Isoform_125936_3	chr4	-	3067	23	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-258	-12079	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	60.4866114548439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTGTGTTTATTGAAT	10	True	NA	NA	False	ATTAAA	-16	NA	57143695	57007756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_57007978_57016853_57016932_57019771_57019968_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
Isoform_125937_4	chr4	-	3633	20	ISM	ENSMUSG00000028434.13	ENSMUST00000095076.10	6746	26	-267	31314	-267	-27608	5prime_fragment	FALSE	canonical	3	30	junction_2	53.6043782062705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTACTTCTTTTTCCA	1	True	NA	NA	False	AATGAA	-12	NA	57143704	57023285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
Isoform_125938_184	chr4	-	3518	16	FSM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	-284	13	-284	-13	multi-exon	FALSE	canonical	3	116	junction_1	13.208414826247	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTACTGCTAACAGTTTT	-16	True	NA	-13	True	AATAAA	-19	NA	57143721	57061738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
Isoform_125939_14	chr4	-	3573	16	FSM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	-284	-42	-284	42	multi-exon	FALSE	canonical	3	116	junction_1	13.208414826247	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTTTTTTGGGGTG	-16	True	NA	42	True	AATAAA	-12	NA	57143721	57061683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
Isoform_125945_3	chr4	-	3456	15	NIC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	-252	-12	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	38.4240570901266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGCTAACAGTTTTT	16	True	NA	-12	True	AATAAA	-20	NA	57143689	57061737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_57063280_57064798_57064864_57068304_57068339_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
Isoform_125948_35	chr4	-	4144	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	23	-2131	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	7.95044652834041	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGTATTTTTAAATA	-11	True	NA	-15	True	AATAAA	-15	NA	57300352	57192971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300280
Isoform_125949_9	chr4	-	6284	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	8	-6	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	7.95044652834041	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTCTTGTCTGTCAA	16	True	NA	-6	True	TATAAA	-18	NA	57300367	57190846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300280
Isoform_125951_9	chr4	-	4309	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-73	-2131	combination_of_known_junctions	FALSE	canonical	2	9	junction_25	11.3804042107475	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGTATTTTTAAATA	-34	True	NA	-15	True	AATAAA	-15	NA	57300829	57192971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300592
Isoform_125952_3	chr4	-	4210	26	FSM	ENSMUSG00000038764.15	ENSMUST00000075637.11	6369	26	28	2131	28	-2131	multi-exon	FALSE	canonical	1	3	junction_25	12.2497999983673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGTATTTTTAAATA	0	True	NA	-15	True	AATAAA	-15	NA	57301809	57192971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57301671
Isoform_125954_8	chr4	-	2313	2	FSM	ENSMUSG00000052117.6	ENSMUST00000063816.6	2830	2	490	27	490	-27	multi-exon	FALSE	canonical	3	12	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCAACTTTGTCTTT	713	False	NA	NA	False	AATGAA	-20	NA	57915807	57908509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_57910612_57915596
Isoform_125956_3	chr4	-	2674	2	FSM	ENSMUSG00000052117.6	ENSMUST00000063816.6	2830	2	129	27	129	-27	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCAACTTTGTCTTT	0	True	NA	NA	False	AATGAA	-20	NA	57916168	57908509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_57910612_57915596
Isoform_125962_1417	chr4	-	572	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	92	387	92	-387	multi-exon	TRUE	canonical	3	4612	junction_4	90.890043459116	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCTGATGTGTTTTA	15	True	NA	-6	True	AATAAA	-22	NA	57956319	57943759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
Isoform_125963_133	chr4	-	651	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	13	387	13	-387	multi-exon	FALSE	canonical	3	4612	junction_4	90.890043459116	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCTGATGTGTTTTA	37	False	NA	-6	True	AATAAA	-22	NA	57956398	57943759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
Isoform_125974_31	chr4	-	3551	5	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	46	-8	combination_of_known_splicesites	FALSE	canonical	2	16	junction_4	115.15288750179	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCGATGTGTGGTT	4	True	NA	-13	True	AATAAA	-14	NA	58553265	58435262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553133
Isoform_125976_36	chr4	-	3458	5	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	133	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	115.15288750179	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	-7	True	NA	-10	True	AATAAA	-17	NA	58553765	58435259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553729
Isoform_125979_155	chr4	-	3391	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	114	7	-59	-7	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	-19	True	NA	-12	True	AATAAA	-15	NA	58553243	58435261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
Isoform_125991_136	chr4	-	3317	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	133	-7	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	-7	True	NA	-12	True	AATAAA	-15	NA	58553765	58435261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
Isoform_125994_14	chr4	-	3446	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	4	-7	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	NA	False	NA	-12	True	AATAAA	-15	NA	58553894	58435261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
Isoform_126002_14	chr4	-	3391	4	NNC	ENSMUSG00000038668.15	novel	3437	4	NA	NA	-101	1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_3	104.818361411009	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGTTCTGGTCTGT	29	False	NA	-4	True	AATAAA	-23	NA	58553729	58435253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553627
Isoform_126003_17	chr4	-	3411	4	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	5624	3	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_3	114.601725796585	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTCTGGTCTGTGC	2934	False	NA	-2	True	AATAAA	-25	NA	58542777	58435251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58542657
Isoform_126014_10	chr4	-	5949	50	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-135	-1123	combination_of_known_junctions	FALSE	canonical	3	16	junction_49	33.7965099031343	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTGCTCCTTATTAG	3414	False	NA	-16	True	AATAAA	-15	NA	58912065	58800033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58911868
Isoform_126016_5	chr4	-	5981	50	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	2	-1121	combination_of_known_junctions	TRUE	canonical	3	17	junction_49	33.7119878645701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTCCTTATTAGCT	25	True	NA	-14	True	AATAAA	-17	NA	58912702	58800031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
Isoform_126017_23	chr4	-	5708	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	1	-1121	combination_of_known_junctions	FALSE	canonical	3	51	junction_48	26.1772719352537	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTCCTTATTAGCT	3	True	NA	-14	True	AATAAA	-17	NA	58911926	58800031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
Isoform_126018_22	chr4	-	5878	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-154	-1109	combination_of_known_junctions	FALSE	canonical	3	51	junction_48	26.1772719352537	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGCTTTATTTTACTTG	16	True	NA	-2	True	AATAAA	-29	NA	58912084	58800019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
Isoform_126022_84	chr4	-	5918	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	6	1121	6	-1121	multi-exon	FALSE	canonical	3	80	junction_48	23.9024347899725	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTCCTTATTAGCT	-16	True	NA	-14	True	AATAAA	-17	NA	58912743	58800031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
Isoform_126023_11	chr4	-	7019	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	26	0	-19	0	multi-exon	TRUE	canonical	3	80	junction_48	23.9024347899725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAATGTGTGTGTGTCT	4	True	NA	-3	True	AATAAA	-18	NA	58912723	58798910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
Isoform_126025_4	chr4	-	5785	48	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	8	-1121	combination_of_known_splicesites	FALSE	canonical	0	0	junction_47	31.1946531152171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTCCTTATTAGCT	-14	True	NA	-14	True	AATAAA	-17	NA	58912741	58800031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58912475
Isoform_126030_9	chr4	-	2261	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	39	-4	39	4	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGCCTTCTCTTATC	-3	True	NA	NA	False	NA	NA	NA	58987080	58965434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
Isoform_126031_63	chr4	-	1204	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	8	1084	8	-1084	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCTGTGATAGAGAA	-6	True	NA	-11	True	AATAAA	-18	NA	58987111	58966522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
Isoform_126032_307	chr4	-	1171	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	41	1084	41	-1084	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCTGTGATAGAGAA	-1	True	NA	-11	True	AATAAA	-18	NA	58987078	58966522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
Isoform_126035_4	chr4	-	3290	9	NIC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	41	-1078	intron_retention	FALSE	canonical	3	293	junction_8	56.2472221536317	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTGATAGAGAATGAAAT	-1	True	NA	-5	True	AATAAA	-24	NA	58987078	58966516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_58966764_58968758_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
Isoform_126036_8	chr4	-	2654	12	NNC	ENSMUSG00000038598.10	novel	4664	28	NA	NA	-6773	43	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	5.11681719253465	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGGTCTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-15	NA	59117886	59081088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879_59086982_59092350_59092502_59093848_59093934_59094129_59094284_59099251_59099431_59109585_59109668_59111092_59111205_59113897_59113978_59117784
Isoform_126046_16	chr4	-	2420	14	ISM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	262	14532	262	-5	5prime_fragment	FALSE	canonical	3	63	junction_6	11.6248051456597	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAATGATTTGCATTT	14	True	NA	NA	False	NA	NA	NA	59438371	59329214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
Isoform_126047_5	chr4	-	2115	12	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	272	3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	23.5308835222744	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGCATTTACCTTTCT	24	True	NA	NA	False	NA	NA	NA	59438361	59329206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
Isoform_126052_6	chr4	-	6812	15	FSM	ENSMUSG00000028382.16	ENSMUST00000174586.8	6640	15	4	-176	4	-4	multi-exon	FALSE	canonical	3	35	junction_14	45.4889535817124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTTTTTCTGTGTTCT	-2	True	NA	-8	True	AATAAA	-22	NA	59549291	59471871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59546148_59546183_59549147
Isoform_126057_18	chr4	-	3489	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	39	3327	-11	64	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATTTTGTCCACCCCTT	-6	False	NA	1	True	AATACA	-16	NA	59549325	59475194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
Isoform_126058_42	chr4	-	6777	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	76	2	-4	-2	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTCTGTGTTCTTG	1	True	NA	-6	True	AATAAA	-24	NA	59549288	59471869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
Isoform_126059_43	chr4	-	6609	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	76	170	-4	10	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTAGTGCATGGTTAA	1	True	NA	-6	True	ATTAAA	-15	NA	59549288	59472037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
Isoform_126060_8	chr4	-	3555	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	-28	3328	-28	63	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATTTTGTCCACCCCT	NA	False	NA	0	True	AATACA	-15	NA	59549392	59475195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
Isoform_126065_5	chr4	-	6631	14	FSM	ENSMUSG00000028382.16	ENSMUST00000148331.9	2016	14	-6	-4609	-6	9	multi-exon	FALSE	canonical	3	25	junction_12	40.1538461538462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTAGTGCATGGTTA	-1	True	NA	-7	True	ATTAAA	-14	NA	59549320	59472038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524403_59524477_59549147
Isoform_126066_177	chr4	-	3186	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	24	27	-4	-27	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAACAAACAAAAA	-4	True	NA	NA	False	NA	NA	NA	59783842	59769663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
Isoform_126073_116	chr4	-	3125	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-54	-1633	4	-27	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAACAAACAAAAA	-24	True	NA	NA	False	NA	NA	NA	59783862	59769663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
Isoform_126078_25	chr4	-	1519	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-7	142	4	-142	multi-exon	FALSE	canonical	3	236	junction_2	17	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGGTTATTCAGTTTG	-7	True	NA	-3	True	NA	NA	NA	59783845	59774229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59775550_59782253_59782335_59783727
Isoform_126079_11	chr4	-	1682	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-4	-24	-4	24	multi-exon	FALSE	canonical	3	236	junction_2	17	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGATGAGAGTCTCT	-4	True	NA	NA	False	AATAAA	-44	NA	59783842	59774063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59775550_59782253_59782335_59783727
Isoform_12608_52	chr11	-	2450	18	NIC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-30	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	12.7347167373532	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGCCTCCAGCTTG	775	False	NA	-2	True	AATAAA	-30	NA	50312848	50280114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
Isoform_126080_7	chr4	-	477	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-29	1206	-1	-1206	multi-exon	FALSE	canonical	3	236	junction_2	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCTGTTGTCTGAGAT	-29	True	NA	NA	False	NA	NA	NA	59783867	59775293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_59775550_59782253_59782335_59783727
Isoform_126082_3	chr4	-	877	7	FSM	ENSMUSG00000073842.11	ENSMUST00000079697.10	927	7	46	4	46	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATATGTCTTTGTGTC	110	False	NA	NA	False	AATAAA	-17	NA	60070365	60066473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_60066723_60067509_60067556_60067719_60067822_60068164_60068276_60068900_60068975_60069732_60069867_60070204
Isoform_126083_3	chr4	-	3509	4	NIC	ENSMUSG00000028389.13	novel	3494	4	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	16.9705627484771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	62126459	62107776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_62110927_62122755_62122888_62123260_62123343_62126314
Isoform_126085_17	chr4	-	3579	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222050.2	2017	4	-116	-1446	-100	-3	multi-exon	FALSE	canonical	3	19	junction_3	8.48528137423857	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAAGTGGTATTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	62126783	62107779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62110927_62122755_62122888_62123260_62123343_62126565
Isoform_126087_9	chr4	-	3528	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222748.2	2564	4	-38	-926	-38	-2	multi-exon	FALSE	canonical	2	4	junction_3	15.556349186104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAAGTGGTATTTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	62126477	62107778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126314
Isoform_12609_59	chr11	-	2676	18	FSM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	10	2	10	-2	multi-exon	FALSE	canonical	3	52	junction_10	7.873128931343	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGCCTCCAGCTTG	4159	False	NA	-2	True	AATAAA	-30	NA	50321942	50280114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
Isoform_126090_14	chr4	-	3581	4	FSM	ENSMUSG00000028389.13	ENSMUST00000221329.2	1776	4	-184	-1621	-99	-3	multi-exon	FALSE	canonical	3	15	junction_3	10.3708994574027	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAAGTGGTATTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	62126782	62107779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126565
Isoform_126091_15	chr4	-	1873	6	ISM	ENSMUSG00000066151.13	ENSMUST00000139308.2	3279	18	25217	0	25217	0	3prime_fragment	FALSE	canonical	3	103	junction_3	12.7530388535439	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTGTTCCTTTTTGGG	3236	False	NA	-1	True	NA	NA	NA	62225314	62218578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131
Isoform_126095_109	chr4	-	4239	28	FSM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	22	3	21	-3	multi-exon	FALSE	canonical	3	62	junction_18	17.8933741789013	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGTTGTGTTCCTTTTT	7016	False	NA	-4	True	AATAAA	-43	NA	62278685	62218581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_126096_51	chr4	-	4285	28	FSM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	-24	3	0	-3	multi-exon	FALSE	canonical	3	62	junction_18	17.8933741789013	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGTTGTGTTCCTTTTT	6970	False	NA	-4	True	AATAAA	-43	NA	62278731	62218581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_126097_7	chr4	-	4387	28	FSM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	-139	16	-61	-16	multi-exon	FALSE	canonical	3	62	junction_18	17.8933741789013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTTCCAGGACTGT	6855	False	NA	-17	True	AATAAA	-30	NA	62278846	62218594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_126098_8	chr4	-	4208	28	NIC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	21	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	24.7540992988791	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGTTGTGTTCCTTTT	7016	False	NA	-5	True	AATAAA	-42	NA	62278685	62218582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239225_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_126099_24	chr4	-	2403	10	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	17635	-5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	34.5643075733435	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACTGTTGTGTTCCTTT	NA	False	NA	-6	True	AATAAA	-41	NA	62232896	62218583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62232796
Isoform_126100_3	chr4	-	2408	10	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	17655	-9	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	35.932034608565	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGGACTGTTGTGTTC	NA	False	NA	-10	True	AATAAA	-37	NA	62232876	62218587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62232767
Isoform_126101_3	chr4	-	2337	10	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	17638	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	38.1530381619558	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTCCAGGACTGTT	NA	False	NA	-16	True	AATAAA	-31	NA	62232893	62218593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62232849
Isoform_126102_3	chr4	-	2908	9	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	17638	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	40.1573078654434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGTTGTGTTCCTTTTT	NA	False	NA	-4	True	AATAAA	-43	NA	62232893	62218581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232118
Isoform_126105_14	chr4	-	4283	19	FSM	ENSMUSG00000066151.13	ENSMUST00000107461.2	2337	19	70	-2016	5	0	multi-exon	FALSE	canonical	3	62	junction_9	12.2877033786216	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGTAGTGCTCCAAT	7000	False	NA	NA	False	NA	NA	NA	62278701	62236862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_126106_5	chr4	-	4382	19	FSM	ENSMUSG00000066151.13	ENSMUST00000107461.2	2337	19	-28	-2017	-14	1	multi-exon	FALSE	canonical	3	62	junction_9	12.2877033786216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTAGTGCTCCAATT	6902	False	NA	NA	False	NA	NA	NA	62278799	62236861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_126108_4	chr4	-	2145	4	FSM	ENSMUSG00000066151.13	ENSMUST00000131977.2	1739	4	5	-411	5	411	multi-exon	FALSE	canonical	3	72	junction_2	12.5698050899765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	7000	False	NA	NA	False	AAAAAG	-37	NA	62278701	62261962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_126109_4	chr4	-	584	4	FSM	ENSMUSG00000066151.13	ENSMUST00000131977.2	1739	4	-22	1177	3	-1177	multi-exon	FALSE	canonical	3	72	junction_2	12.5698050899765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGGAATGCTTGCTTTAG	6973	False	NA	NA	False	ATTAAA	-13	NA	62278728	62263550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_126110_7	chr4	-	4788	3	ISM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	30	0	13	0	intron_retention	FALSE	canonical	3	381	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGACGTCCTTAAAGGT	2694	False	NA	NA	False	AATAAA	-18	NA	62326849	62312819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_62313259_62320960_62321153_62322692
Isoform_126111_23	chr4	-	3031	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	18	-2230	1	2230	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAATTCACCTGTTT	2682	False	NA	NA	False	AATAAA	-12	NA	62326861	62310589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
Isoform_126113_145	chr4	-	797	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	5	0	-5	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTGAGACGTCCTTA	2681	False	NA	NA	False	AATAAA	-13	NA	62326862	62312824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
Isoform_126114_94	chr4	-	1578	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	18	-777	1	777	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGACTCTTTATTATT	2682	False	NA	NA	False	AATAAA	-21	NA	62326861	62312042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
Isoform_126115_23	chr4	-	826	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	-12	5	-12	-5	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTGAGACGTCCTTA	2652	False	NA	NA	False	AATAAA	-13	NA	62326891	62312824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
Isoform_126119_9	chr4	-	1479	3	FSM	ENSMUSG00000066149.12	ENSMUST00000107459.2	654	3	4	-829	4	778	multi-exon	FALSE	canonical	3	31	junction_2	175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGACTCTTTATTATTG	2685	False	NA	NA	False	AATAAA	-22	NA	62326858	62312041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62313259_62320960_62321153_62326788
Isoform_12612_5	chr11	-	2219	15	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	0	5304	0	-5217	5prime_fragment	FALSE	canonical	3	52	junction_7	8.26968893623217	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATGAGTACACTGTAG	4149	False	NA	NA	False	ATTAAA	-14	NA	50321952	50285416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
Isoform_126120_10	chr4	-	1336	11	FSM	ENSMUSG00000028391.17	ENSMUST00000107452.8	1437	11	1	100	1	-100	multi-exon	FALSE	canonical	3	12	junction_8	57	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389123	62371970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381711_62382163_62382307_62387073_62387171_62389055
Isoform_126121_28	chr4	-	1447	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	0	1102	0	-100	multi-exon	FALSE	canonical	3	20	junction_10	54.6457683631587	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389124	62371970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
Isoform_126125_166	chr4	-	1340	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	0	100	0	-100	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389124	62371970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
Isoform_126126_3	chr4	-	2668	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-12	-1216	-3	214	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTAACATGTATCATT	NA	False	NA	NA	False	TTTAAA	-19	NA	62389136	62370654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
Isoform_126128_4	chr4	-	1072	9	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	3	-98	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	63.3560129348431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGGCTTTGTGTTTT	NA	False	NA	-2	True	NA	NA	NA	62389130	62371968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62387073_62387171_62389055
Isoform_126129_7	chr4	-	1188	10	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	-2	-100	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	61.169063430689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389135	62371970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
Isoform_12613_25	chr11	-	5362	5	FSM	ENSMUSG00000044807.14	ENSMUST00000109135.9	5325	5	-32	-5	2	5	multi-exon	FALSE	canonical	3	17	junction_4	5.87367006223537	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGTGAATGTGAGCT	298	False	NA	NA	False	AATAAA	-22	NA	50718549	50701907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718405
Isoform_126130_3	chr4	-	2286	10	NIC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	61.169063430689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389131	62370868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
Isoform_126131_6	chr4	-	1131	2	FSM	ENSMUSG00000038422.3	ENSMUST00000037820.3	1205	2	22	52	22	-52	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAGAACTGCGAGGGCT	NA	False	NA	NA	False	NA	NA	NA	62420491	62417296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62418331_62420394
Isoform_126134_55	chr4	-	1361	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-155	0	-155	0	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438310	62427405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
Isoform_126135_750	chr4	-	1220	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-13	-1	-13	1	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCCCTCTTCCTGCC	NA	False	NA	0	True	AGTAAA	-19	NA	62438168	62427404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
Isoform_126136_58	chr4	-	1251	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-44	-1	-44	1	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCCCTCTTCCTGCC	NA	False	NA	0	True	AGTAAA	-19	NA	62438199	62427404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
Isoform_126137_46	chr4	-	1401	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-194	-1	-194	1	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCCCTCTTCCTGCC	NA	False	NA	0	True	AGTAAA	-19	NA	62438349	62427404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
Isoform_126140_9	chr4	-	2018	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	-219	6	-219	-6	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATGACTCATACAATG	NA	False	NA	-5	True	AATAAA	-16	NA	62443524	62440891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
Isoform_126141_183	chr4	-	1778	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	21	6	-9	-6	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATGACTCATACAATG	NA	False	NA	-5	True	AATAAA	-16	NA	62443284	62440891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
Isoform_126142_28	chr4	-	1806	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	-7	6	-7	-6	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATGACTCATACAATG	NA	False	NA	-5	True	AATAAA	-16	NA	62443312	62440891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
Isoform_126146_15	chr4	-	1987	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	-189	7	-189	-7	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGATGACTCATACAAT	NA	False	NA	-6	True	AATAAA	-15	NA	62443494	62440892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
Isoform_126148_3	chr4	-	783	7	NNC	ENSMUSG00000028356.5	novel	1268	10	NA	NA	4458	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	3.18416219575713	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGTTGGCGTCTCA	NA	False	NA	NA	False	AATAAA	-22	NA	63067952	63061511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_63061638_63061903_63062078_63062387_63062556_63063501_63063584_63066938_63066986_63067655_63067758_63067868
Isoform_126149_7	chr4	-	2199	8	ISM	ENSMUSG00000039158.12	ENSMUST00000035724.5	5387	22	26317	4	4166	-4	3prime_fragment	FALSE	canonical	3	30	junction_5	4.59369576880387	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACCTGTGGCTGTGCT	NA	False	NA	NA	False	AATAAA	-34	NA	63295274	63285365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067
Isoform_12615_4	chr11	-	5949	4	NIC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	1	-6	intron_retention	FALSE	canonical	3	17	junction_3	6.23609564462324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGATTTATAAAGTGGT	297	False	NA	NA	False	AATAAA	-11	NA	50718550	50701918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_50706821_50707945_50708763_50717252_50717338_50718405
Isoform_126150_8	chr4	-	5267	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7341	-13	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	7.87947763499926	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCCCAAAGCTACCTGT	NA	False	NA	NA	False	AATAAA	-25	NA	63328932	63285374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
Isoform_126151_6	chr4	-	4540	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7366	-765	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	7.87947763499926	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCAGGAGTGGATGAATG	NA	False	NA	NA	False	TTTAAA	-18	NA	63328957	63286126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
Isoform_126153_5	chr4	-	4151	13	NIC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	-69	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	13.5428845606179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGGGGCCAGTGTTCTA	4409	False	NA	-11	True	AATAAA	-14	NA	63414297	63333150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_63333904_63334238_63334362_63334648_63334828_63336324_63336860_63337658_63337731_63347322_63347356_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
Isoform_126155_22	chr4	-	4101	12	FSM	ENSMUSG00000039137.19	ENSMUST00000063650.10	4016	12	-88	3	-48	-3	multi-exon	FALSE	canonical	3	12	junction_3	10.7826000023147	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGGCCAGTGTTCTAT	4430	False	NA	-10	True	AATAAA	-15	NA	63414276	63333149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
Isoform_126158_3	chr4	-	3817	8	NIC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	-52	-2328	intron_retention	FALSE	canonical	3	8	junction_1	13.0039240545432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAGGACAGCAGGGAT	4426	False	NA	NA	False	AATAAA	-20	NA	63414280	63346276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_63347655_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
Isoform_126159_6	chr4	-	2879	7	FSM	ENSMUSG00000039137.19	ENSMUST00000063672.10	2804	7	-73	-2	-73	2	multi-exon	FALSE	canonical	3	23	junction_2	9.97357620025145	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGAACTCCATAATTG	4405	False	NA	NA	False	AATAAA	-21	NA	63414301	63349667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
Isoform_12616_3	chr11	-	2439	5	FSM	ENSMUSG00000044296.11	ENSMUST00000049625.2	2408	5	-29	-2	-29	-2	multi-exon	FALSE	canonical	0	0	junction_2	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTGCTTGTTTATTTA	NA	False	NA	NA	False	ACTAAA	-23	NA	50732408	50722859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50724799_50728736_50728833_50729236_50729364_50731352_50731418_50732196
Isoform_126160_11	chr4	-	2550	4	ISM	ENSMUSG00000039137.19	ENSMUST00000063672.10	2804	7	-66	3370	-66	-2	5prime_fragment	FALSE	canonical	3	35	junction_2	7.71722460186015	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTTTCTGGTTGTTTC	4412	False	NA	NA	False	TTTAAA	-41	NA	63414294	63353039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_63353800_63379518_63379645_63390886_63391106_63412849
Isoform_126161_27	chr4	-	2100	4	FSM	ENSMUSG00000039137.19	ENSMUST00000133425.2	797	4	-1303	0	-71	0	multi-exon	FALSE	canonical	3	16	junction_1	15.1070255914995	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGTAATGAAACTCACT	4407	False	NA	NA	False	AATAAA	-15	NA	63414299	63378399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_63378705_63379518_63379645_63390886_63391106_63412849
Isoform_126163_4	chr4	-	2414	3	FSM	ENSMUSG00000039137.19	ENSMUST00000140720.2	872	3	-1385	-157	-71	157	multi-exon	FALSE	canonical	3	35	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	4407	False	NA	NA	False	NA	NA	NA	63414299	63378899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_63379645_63390886_63391106_63412849
Isoform_126165_49	chr4	-	5706	38	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_10	42.090739921554	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328679	70141259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
Isoform_126167_5	chr4	-	5713	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_18	48.2641108627347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328680	70141259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
Isoform_12617_7	chr11	-	2204	6	FSM	ENSMUSG00000048728.16	ENSMUST00000163301.8	2090	6	-118	4	32	-4	multi-exon	FALSE	canonical	3	11	junction_3	3.42928563989645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACAATTTGTTTCTTT	NA	False	NA	-5	True	ATTAAA	-22	NA	50778446	50763550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50765115_50768869_50768933_50774010_50774104_50774511_50774639_50777195_50777326_50778219
Isoform_126173_164	chr4	-	5680	37	FSM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	0	6167	0	0	multi-exon	FALSE	canonical	3	146	junction_29	30.4796025702355	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328680	70141259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
Isoform_126176_6	chr4	-	5791	37	FSM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	-111	6167	-111	0	multi-exon	FALSE	canonical	3	146	junction_29	30.4796025702355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328791	70141259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
Isoform_126178_21	chr4	-	5686	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_17	39.3689810214421	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328680	70141259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
Isoform_126187_16	chr4	-	3760	20	FSM	ENSMUSG00000008305.19	ENSMUST00000030095.11	2569	20	-792	-399	-25	-1	multi-exon	FALSE	canonical	3	29	junction_14	72.1381791945633	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119181	72036042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_126190_159	chr4	-	3719	20	FSM	ENSMUSG00000008305.19	ENSMUST00000072695.13	3644	20	-76	1	-14	-1	multi-exon	FALSE	canonical	3	132	junction_8	62.2917361117158	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119170	72036042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_126196_16	chr4	-	3580	18	NIC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_14	72.7398549984141	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCTTCCTCCTTGA	NA	False	NA	78	True	AGTAAA	-15	NA	72119171	72036044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_126198_35	chr4	-	3684	20	NNC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	71.8026303733495	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119138	72036042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076652_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_12620_3	chr11	-	2107	6	NNC	ENSMUSG00000048728.16	novel	2090	6	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	5.81721582889959	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTTACAATTTGTTTC	NA	False	NA	-8	True	ATTAAA	-19	NA	50778328	50763553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_50765115_50768869_50768933_50774010_50774101_50774511_50774639_50777195_50777326_50778192
Isoform_126204_39	chr4	-	3455	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	2	-1	combination_of_known_splicesites	TRUE	canonical	3	30	junction_12	75.0867088160778	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119128	72036042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_126206_17	chr4	-	3509	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-26	-1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_12	75.0867088160778	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119182	72036042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_12621_4	chr11	-	2120	6	NNC	ENSMUSG00000048728.16	novel	2090	6	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	4.06939798987516	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTTCTTTTTTTAA	NA	False	NA	1	True	ATTAAA	-28	NA	50778359	50763544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_50765115_50768869_50768933_50774010_50774101_50774511_50774639_50777195_50777326_50778219
Isoform_126210_38	chr4	-	2128	7	ISM	ENSMUSG00000008305.19	ENSMUST00000030095.11	2569	20	-743	39377	-2	-2	5prime_fragment	FALSE	canonical	3	29	junction_1	99.9656885580692	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGCCTGTGTTCTAAT	NA	False	NA	-2	True	AATAAA	-18	NA	72119132	72075818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_126211_38	chr4	-	2176	7	ISM	ENSMUSG00000008305.19	ENSMUST00000030095.11	2569	20	-789	39375	-22	0	5prime_fragment	FALSE	canonical	3	29	junction_1	99.9656885580692	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCCTGTGTTCTAATTA	NA	False	NA	0	True	AATAAA	-20	NA	72119178	72075816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_126213_290	chr4	-	2105	7	FSM	ENSMUSG00000008305.19	ENSMUST00000107337.8	2067	7	-39	1	-8	-1	multi-exon	FALSE	canonical	3	194	junction_1	41.6959896819293	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	-1	True	AATAAA	-19	NA	72119138	72075817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_126214_33	chr4	-	2186	7	FSM	ENSMUSG00000008305.19	ENSMUST00000107337.8	2067	7	-120	1	-63	-1	multi-exon	FALSE	canonical	3	194	junction_1	41.6959896819293	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	-1	True	AATAAA	-19	NA	72119219	72075817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_12622_3	chr11	-	3177	7	NIC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	-5	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	29.9411459737636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	-1	True	NA	NA	NA	50806997	50789539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_50792119_50796432_50796514_50796912_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
Isoform_126221_210	chr4	-	733	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	3	5	3	-5	multi-exon	FALSE	canonical	3	402	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAAGTAGTTCTTTTA	NA	False	NA	NA	False	AATAAA	-11	NA	75196539	75195595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_75196007_75196217
Isoform_126223_7	chr4	-	3682	3	NNC	ENSMUSG00000028398.9	novel	741	2	NA	NA	13	2978	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTACTTTGAATAATAT	NA	False	NA	NA	False	NA	NA	NA	75196529	75192612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_75192642_75192665_75196007_75196217
Isoform_126224_4	chr4	-	2591	9	FSM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	-70	5908	-68	-3	multi-exon	FALSE	canonical	3	11	junction_1	6.11861912526021	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82423615	82214320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
Isoform_126225_3	chr4	-	3000	9	FSM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	-482	5911	-11	-6	multi-exon	FALSE	canonical	3	11	junction_1	6.11861912526021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82424027	82214323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
Isoform_126226_5	chr4	-	4576	2	FSM	ENSMUSG00000008575.18	ENSMUST00000135024.2	3835	2	399	-1140	-70	1140	multi-exon	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGGACAGATTAAGGAA	NA	False	NA	NA	False	NA	NA	NA	82423617	82413080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_82417007_82422967
Isoform_126228_34	chr4	-	3382	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	45	5336	45	-27	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGTGTTATTGTTG	NA	False	NA	NA	False	TATAAA	-25	NA	82777865	82722310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
Isoform_12623_9	chr11	-	3168	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.6887462097269	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806988	50789538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
Isoform_126232_28	chr4	-	8696	10	NNC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	45	-2	at_least_one_novel_splicesite	TRUE	non_canonical	2	26	junction_1	21.7766439614148	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAATGTTTTTATCCTCT	NA	False	NA	-12	True	AATAAA	-16	NA	82777865	82716976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_82718375_82718394_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
Isoform_126234_6	chr4	-	3516	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	-89	5336	-89	-27	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGTGTTATTGTTG	NA	False	NA	NA	False	TATAAA	-25	NA	82777999	82722310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
Isoform_126238_83	chr4	-	2712	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	0	6119	0	0	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAGTGCTGAAGCCTG	NA	False	NA	NA	False	AATAAA	-23	NA	83242492	83144655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
Isoform_12624_3	chr11	-	3122	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.927591596183	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGCCTTGGTCATGGT	NA	False	NA	-3	True	NA	NA	NA	50806989	50789541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801576_50801704_50803106_50803232_50806935
Isoform_126246_51	chr4	-	8769	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	62	0	-4	0	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTCTTCTATTTGATG	NA	False	NA	-12	True	AATAAA	-16	NA	83242430	83138536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
Isoform_126248_35	chr4	-	8676	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-5	160	-5	-160	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTCCTTTTCTTTGTC	NA	False	NA	-27	True	AATAAA	-16	NA	83242497	83138696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
Isoform_12625_6	chr11	-	3089	6	FSM	ENSMUSG00000049321.18	ENSMUST00000116378.8	3069	6	-21	1	2	-1	multi-exon	FALSE	canonical	3	8	junction_1	26.1763251813542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	-1	True	NA	NA	NA	50806990	50789539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50792119_50796912_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
Isoform_126250_16	chr4	-	1820	16	FSM	ENSMUSG00000038172.15	ENSMUST00000048274.11	1804	16	-21	5	-5	-5	multi-exon	FALSE	canonical	3	169	junction_7	23.0820757780192	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATCACAAATTCAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	83242497	83158051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
Isoform_126254_9	chr4	-	935	7	FSM	ENSMUSG00000038172.15	ENSMUST00000030205.14	842	7	-100	7	-34	-7	multi-exon	FALSE	canonical	2	10	junction_1	86.0905531015647	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTAATGCTCTATT	NA	False	NA	NA	False	AATAAA	-9	NA	83242526	83177441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83177704_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
Isoform_12626_4	chr11	-	3108	6	NIC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	25.4055112131207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50807005	50789538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_50792119_50796912_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
Isoform_12627_3	chr11	-	3044	6	NIC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	28.5517074795887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	-2	True	NA	NA	NA	50806990	50789540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_50792119_50796912_50796985_50801262_50801353_50801576_50801704_50803106_50803229_50806935
Isoform_126278_1044	chr4	-	3212	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	37	2	31	-2	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTATTAGTAAGTTATT	NA	False	NA	-6	True	ATTAAA	-14	NA	83404659	83373918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_126279_370	chr4	-	3239	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	10	2	4	-2	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTATTAGTAAGTTATT	NA	False	NA	-6	True	ATTAAA	-14	NA	83404686	83373918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_12628_17	chr11	-	3085	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	19.4668949758301	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806989	50789538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
Isoform_126281_74	chr4	-	4477	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-5	-1221	-5	1221	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTTTATCTGTCATCT	NA	False	NA	-2	True	AATAAA	-20	NA	83404701	83372695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_126282_291	chr4	-	4321	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	37	-1107	31	1107	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTGGCTAGCCTTTCT	NA	False	NA	-27	True	AGTAAA	-18	NA	83404659	83372809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_126283_94	chr4	-	4372	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-14	-1107	-14	1107	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTGGCTAGCCTTTCT	NA	False	NA	-27	True	AGTAAA	-18	NA	83404710	83372809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_126284_212	chr4	-	4433	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	37	-1219	31	1219	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAATGTTTATCTGTCAT	NA	False	NA	-4	True	AATAAA	-18	NA	83404659	83372697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_12629_17	chr11	-	3085	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	17.9710878913882	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	-1	True	NA	NA	NA	50806987	50789539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
Isoform_126293_250	chr4	-	1852	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	36	10	31	-10	multi-exon	FALSE	canonical	3	354	junction_1	432.133081353418	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	False	NA	84	True	AATAAA	-9	NA	83404659	83380117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_126294_170	chr4	-	1879	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	9	10	4	-10	multi-exon	FALSE	canonical	3	354	junction_1	432.133081353418	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	False	NA	84	True	AATAAA	-9	NA	83404686	83380117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_126296_72	chr4	-	1940	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	24	9	24	-9	multi-exon	FALSE	canonical	3	116	junction_1	501.525034270474	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCTGATTTTTA	NA	False	NA	85	True	AATAAA	-10	NA	83404666	83380116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_126298_158	chr4	-	2973	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	37	6201	31	-10	5prime_fragment	FALSE	canonical	3	1502	junction_9	115.542200082913	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	False	NA	84	True	AATAAA	-9	NA	83404659	83380117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_126299_62	chr4	-	2999	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	10	6202	4	-11	5prime_fragment	FALSE	canonical	3	1502	junction_9	115.542200082913	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAACCTGATTTT	NA	False	NA	83	True	AATAAA	-8	NA	83404686	83380118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_12631_8	chr11	-	3037	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	23.8109218637162	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806985	50789538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801576_50801704_50803106_50803229_50806935
Isoform_126316_4	chr4	-	3874	8	NIC	ENSMUSG00000028487.19	novel	3948	7	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	2.84999104903714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAGAAAAGAAACAAA	NA	False	NA	NA	False	AATAAA	-15	NA	84593326	84193595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_84194685_84196142_84196177_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
Isoform_126317_7	chr4	-	3865	7	FSM	ENSMUSG00000028487.19	ENSMUST00000107198.9	3948	7	-25	108	-6	15	multi-exon	FALSE	canonical	1	4	junction_2	2.98142396999972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTTCTTACAGTTGTCT	NA	False	NA	NA	False	AATAAA	-37	NA	84593329	84193573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
Isoform_126318_3	chr4	-	1348	3	NIC	ENSMUSG00000028492.14	novel	1716	4	NA	NA	-5	-167	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAACATTCA	NA	False	NA	NA	False	NA	NA	NA	86457359	86363044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_86364055_86405976_86406157_86457201
Isoform_12632_6	chr11	-	3043	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	22.9120055865915	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806988	50789538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801576_50801704_50803106_50803232_50806935
Isoform_126320_43	chr4	-	3947	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	27	2184	-9	-2184	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGAGGCACTAACGGTT	NA	False	NA	-38	True	AATAAA	-25	NA	86530265	86499275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_126321_74	chr4	-	3699	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	28	2431	-8	-2431	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTACCATTGTGG	NA	False	NA	-12	True	TATAAA	-14	NA	86530264	86499522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_126323_33	chr4	-	6152	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	6	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAATTCCCTGTATT	NA	False	NA	-7	True	AATAAA	-16	NA	86530286	86497091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_126324_34	chr4	-	6130	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	28	0	-8	0	multi-exon	TRUE	canonical	3	127	junction_2	24.1993672437938	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAATTCCCTGTATT	NA	False	NA	-7	True	AATAAA	-16	NA	86530264	86497091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_126325_40	chr4	-	3980	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	5	2173	-1	-2173	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGGTTGATTTATTATC	NA	False	NA	-27	True	AATAAA	-36	NA	86530287	86499264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_126329_9	chr4	-	3380	15	FSM	ENSMUSG00000038047.19	ENSMUST00000128381.8	2302	15	8	-1086	2	1086	multi-exon	FALSE	canonical	3	135	junction_12	19.1012340663409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTGTGTTTGGGCATA	NA	False	NA	NA	False	AATAAA	-13	NA	86530284	86502177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_126338_608	chr4	-	1687	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	67	134	-7	-134	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTGGTCTGAGCAG	NA	False	NA	-14	True	AATAAA	-22	NA	86588230	86574935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
Isoform_12634_5	chr11	-	604	5	ISM	ENSMUSG00000049321.18	ENSMUST00000116378.8	3069	6	-19	7278	4	0	5prime_fragment	FALSE	canonical	3	29	junction_4	20.1308221391974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTCTTTAATGGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	50806988	50796816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
Isoform_126340_140	chr4	-	1720	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	27	141	27	-141	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCTCCTGTGTGGTC	NA	False	NA	-21	True	AATAAA	-15	NA	86588270	86574942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
Isoform_126342_18	chr4	-	1924	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	-176	140	-176	-140	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCTCCTGTGTGGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	86588473	86574941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
Isoform_126353_5223	chr4	-	831	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	45	2	-13	-2	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	5223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775604	86772898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
Isoform_126355_1024	chr4	-	868	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	8	2	8	-2	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775641	86772898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
Isoform_12636_6	chr11	-	2480	5	FSM	ENSMUSG00000020335.14	ENSMUST00000109124.10	2455	5	-1	-24	-1	24	multi-exon	FALSE	canonical	0	0	junction_1	1.78535710713571	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAGAAAGAGAACTG	5250	False	NA	NA	False	NA	NA	NA	50822461	50812625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_50814668_50819390_50819487_50820203_50820331_50821727_50821813_50822331
Isoform_126368_17	chr4	-	2075	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	10	3984	10	7	multi-exon	FALSE	canonical	2	10	junction_9	3.7	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATGAAACA	NA	False	NA	NA	False	AAAACA	-25	NA	87951591	87692145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
Isoform_126369_4	chr4	-	3301	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	20	2748	20	0	multi-exon	FALSE	canonical	2	10	junction_9	3.7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87951581	87690909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
Isoform_126370_3	chr4	-	4026	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	34	2009	34	739	multi-exon	TRUE	canonical	2	10	junction_9	3.7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGTTTCTGTATAATT	NA	False	NA	NA	False	ATTAAA	-21	NA	87951567	87690170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
Isoform_126371_4	chr4	-	870	3	FSM	ENSMUSG00000044303.7	ENSMUST00000107131.2	895	3	91	-66	91	-4	multi-exon	FALSE	canonical	2	3	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGATTTTTAGCATAG	NA	False	NA	-7	True	AATAAA	-22	NA	89212799	89192711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_89193012_89194881_89195223_89212570
Isoform_126373_11	chr4	-	3707	7	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	40.2947473830854	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTGTGTATCTTTAAA	NA	False	NA	-3	True	AATAAA	-15	NA	91260276	91139004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
Isoform_126374_4	chr4	-	3693	7	NNC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	488	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	39.660013447636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGAACTGTGTATCTTT	NA	False	NA	-6	True	AATAAA	-12	NA	91259705	91139007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259576
Isoform_126375_4	chr4	-	3482	6	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-5	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	42.0694663621967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGTGTATCTTTAAAT	NA	False	NA	-2	True	AATAAA	-16	NA	91260276	91139003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_91141805_91142377_91142417_91152228_91152383_91169450_91169555_91196847_91197092_91260136
Isoform_126378_45	chr4	-	3667	6	NIC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.2082863444267	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTGTATCTTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	91260276	91139005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
Isoform_126380_7	chr4	-	3729	6	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-6	55	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.2082863444267	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	57	True	AATACA	-37	NA	91260277	91138944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
Isoform_126382_9	chr4	-	3657	6	NNC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	488	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	35.1112517578055	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTGTGTATCTTTAAA	NA	False	NA	-3	True	AATAAA	-15	NA	91259705	91139004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259576
Isoform_126383_3	chr4	-	3650	6	NNC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	487	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	35.4761891978268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91259706	91139002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259586
Isoform_126386_6	chr4	-	3728	6	FSM	ENSMUSG00000008489.19	ENSMUST00000107110.8	3671	6	-3	-54	-3	54	multi-exon	FALSE	canonical	0	0	junction_5	41.6461282714252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	56	True	AATACA	-36	NA	91260274	91138945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
Isoform_126387_17	chr4	-	3671	6	FSM	ENSMUSG00000008489.19	ENSMUST00000107110.8	3671	6	-3	3	-3	-3	multi-exon	FALSE	canonical	0	0	junction_5	41.6461282714252	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91260274	91139002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
Isoform_126390_3	chr4	-	1069	6	NNC	ENSMUSG00000087128.8	novel	925	5	NA	NA	-6	-18	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	4.63033476111609	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGAGACATGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	94365410	94349185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_94349593_94350122_94350292_94352666_94352793_94353653_94353778_94356020_94356103_94365249
Isoform_126391_307	chr4	-	2081	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	25	1	-5	-1	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGATATCTTTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	94445008	94388318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
Isoform_126395_10	chr4	-	1986	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	109.846483785327	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGATATCTTTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	94444998	94388318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_94389654_94409298_94409373_94437355_94437432_94439501_94439703_94444698
Isoform_126396_9	chr4	-	1999	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	114.767972448763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGATATCTTTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	94445002	94388318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_94389654_94409298_94409373_94438658_94438744_94439501_94439703_94444698
Isoform_126397_19	chr4	-	1920	4	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	128.416855937563	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGATATCTTTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	94445008	94388318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_94389654_94409298_94409373_94439501_94439703_94444698
Isoform_126398_6	chr4	-	2007	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	115.798316049932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGATATCTTTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	94445008	94388318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_94389654_94437355_94437432_94438658_94438744_94439501_94439703_94444698
Isoform_126400_5	chr4	-	464	2	FSM	ENSMUSG00000028578.9	ENSMUST00000153294.2	2075	2	-35	1646	-5	-1646	multi-exon	FALSE	canonical	3	294	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAATGCTGCAGCAA	NA	False	NA	NA	False	NA	NA	NA	94445038	94439578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94439703_94444698
Isoform_126419_904	chr4	-	2713	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	71	0	8	0	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94491410	94457403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
Isoform_126424_143	chr4	-	4754	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	51	-2021	-12	368	multi-exon	TRUE	canonical	3	626	junction_12	53.7532164993284	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACATCTTATTGACTGTA	NA	False	NA	-5	True	AATAAA	-21	NA	94491430	94455382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
Isoform_126441_27	chr4	-	2532	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	27	4861	2	124	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATTATGTTTTTTTTT	NA	False	NA	NA	False	TTTAAA	-5	NA	94867310	94835137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
Isoform_126442_18	chr4	-	7410	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	11	-1	11	1	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTAGCAATGTTATTG	NA	False	NA	1	True	AATAAA	-26	NA	94867326	94830275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
Isoform_126447_6	chr4	-	975	7	NNC	ENSMUSG00000028563.17	novel	1027	7	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	212.976328888134	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTGACCTGTTATTA	NA	False	NA	-5	True	AATAAA	-17	NA	98271491	98243607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263266_98268854_98268929_98271305
Isoform_126449_9	chr4	-	3671	8	ISM	ENSMUSG00000035407.9	ENSMUST00000102790.4	4795	10	38273	1	-7789	-1	3prime_fragment	FALSE	canonical	1	2	junction_7	8.97161055320433	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTCTTACGATTTCTTT	NA	False	NA	-12	True	ATTAAA	-14	NA	98667501	98643135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_98644823_98649639_98649841_98653699_98653843_98659492_98659713_98661619_98661708_98662910_98663130_98665235_98665348_98666500
Isoform_126450_4	chr4	-	4917	10	FSM	ENSMUSG00000035407.9	ENSMUST00000102790.4	4795	10	-126	4	-126	-4	multi-exon	FALSE	canonical	1	2	junction_7	7.99228022593531	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGGTCTTACGATTTC	NA	False	NA	-15	True	ATTAAA	-11	NA	98705900	98643138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_98644823_98649639_98649841_98653699_98653843_98659492_98659713_98661619_98661708_98662910_98663130_98665235_98665348_98666500_98668430_98673895_98673979_98705662
Isoform_126454_9	chr4	-	6811	49	FSM	ENSMUSG00000028556.16	ENSMUST00000075836.12	6704	49	-106	-1	47	-1	multi-exon	FALSE	canonical	3	12	junction_8	28.4259515622999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATGAGTGGGATTTT	NA	False	NA	-5	True	ATTAAA	-20	NA	99009105	98825092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98834992_98842102_98842118_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
Isoform_126458_122	chr4	-	6779	48	FSM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-80	-402	73	-1	multi-exon	FALSE	canonical	3	95	junction_7	16.1052727349995	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATGAGTGGGATTTT	NA	False	NA	-5	True	ATTAAA	-20	NA	99009079	98825092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
Isoform_126459_20	chr4	-	6842	48	FSM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-144	-401	9	0	multi-exon	FALSE	canonical	3	95	junction_7	16.1052727349995	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	99009143	98825093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
Isoform_126461_6	chr4	-	2295	18	ISM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-107	78361	46	-7678	5prime_fragment	FALSE	canonical	3	117	junction_9	10.0827029934427	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGCTGTTTCATCT	NA	False	NA	NA	False	ATTAAA	-14	NA	99009106	98903855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
Isoform_126462_14	chr4	-	1315	10	ISM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-122	128043	31	-1548	5prime_fragment	FALSE	canonical	3	117	junction_1	10.3171916936948	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTCAATGCTAATTC	NA	False	NA	NA	False	AATAAA	-18	NA	99009121	98953537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
Isoform_126465_74	chr4	-	765	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	53	1988	1	-59	multi-exon	FALSE	canonical	3	74	junction_5	47.6377935572167	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTGTGTATATGCCT	NA	False	NA	-1	True	AATAAA	-30	NA	99717370	99655626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
Isoform_126467_9	chr4	-	555	7	NIC	ENSMUSG00000028549.18	novel	716	8	NA	NA	-8	-75	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	78.2206636524021	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCCTTTGTGTGCAAAA	NA	False	NA	-17	True	AATAAA	-14	NA	99717379	99655642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99702294_99702338_99717319
Isoform_126475_372	chr4	-	4870	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	35	1	-21	-1	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCATATGCCTTTTAAT	NA	False	NA	-8	True	AATAAA	-16	NA	101122444	101009564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
Isoform_126476_28	chr4	-	3851	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	3	1052	2	830	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTATTCTGCCTCT	NA	False	NA	NA	False	TTTAAA	-17	NA	101122476	101010615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
Isoform_126481_11	chr4	-	1930	4	NNC	ENSMUSG00000035201.16	novel	1976	4	NA	NA	-29796	11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	1.69967317119759	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTACTTCTCACTGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	101731016	101692154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_101693139_101694021_101694595_101695022_101695337_101730957
Isoform_126483_11	chr4	-	2619	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	10	-1716	10	1716	multi-exon	FALSE	canonical	3	233	junction_2	115.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGTCCTTCATGAT	NA	False	NA	NA	False	NA	NA	NA	101750976	101745500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_101747741_101747885_101748198_101750909
Isoform_126484_140	chr4	-	900	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	10	3	10	-3	multi-exon	FALSE	canonical	3	233	junction_2	115.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTTTTTCTTCTTGA	NA	False	NA	-5	True	ATTAAA	-23	NA	101750976	101747219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_101747741_101747885_101748198_101750909
Isoform_126487_45	chr4	-	1378	3	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9901	-3	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	141	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTTTTTCTTCTTGA	NA	False	NA	-5	True	ATTAAA	-23	NA	101760887	101747219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_101747741_101747885_101748198_101760342
Isoform_126488_3	chr4	-	1049	2	NIC	ENSMUSG00000046133.4	novel	913	3	NA	NA	10	1	intron_retention	FALSE	canonical	3	233	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTCTTCTTGATGTT	NA	False	NA	-1	True	ATTAAA	-27	NA	101750976	101747215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_101748198_101750909
Isoform_126489_3	chr4	-	2169	4	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9759	1205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.17856276425687	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTGTTTGTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	101828487	101823444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_101824980_101825125_101825438_101826925_101827123_101828362
Isoform_126490_17	chr4	-	1978	3	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9758	1210	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	2.5	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTTTCTTTTTCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	101828488	101823439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_101824980_101825125_101825438_101828362
Isoform_126493_24	chr4	-	4410	12	FSM	ENSMUSG00000028521.18	ENSMUST00000036195.13	4021	12	-386	-3	-25	3	multi-exon	FALSE	canonical	3	35	junction_4	6.03022689155527	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTGTTAGAATTCC	5272	False	NA	-2	True	AATAAA	-13	NA	103072386	103027849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
Isoform_126494_29	chr4	-	4025	12	FSM	ENSMUSG00000028521.18	ENSMUST00000036195.13	4021	12	0	-4	0	-3	multi-exon	FALSE	canonical	3	35	junction_4	6.03022689155527	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGTTAGAATTCCT	5658	False	NA	-1	True	AATAAA	-14	NA	103072000	103027848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
Isoform_126497_8	chr4	-	4579	12	FSM	ENSMUSG00000028521.18	ENSMUST00000036195.13	4021	12	-554	-4	-193	-3	multi-exon	FALSE	canonical	3	35	junction_4	6.03022689155527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGTTAGAATTCCT	5104	False	NA	-1	True	AATAAA	-14	NA	103072554	103027848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
Isoform_126498_6	chr4	-	4452	13	NNC	ENSMUSG00000028521.18	novel	4021	12	NA	NA	-116	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.7221960167482	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGTTAGAATTCCT	5181	False	NA	-1	True	AATAAA	-14	NA	103072477	103027848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_103030054_103030103_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
Isoform_126506_71	chr4	-	7965	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	1	3	1	-3	multi-exon	FALSE	canonical	3	64	junction_5	8.06903804675625	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTGTCTGAAGCTGC	NA	False	NA	-3	True	AATAAA	-12	NA	104967086	104887073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
Isoform_126507_21	chr4	-	8201	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	-7	-225	-7	225	multi-exon	TRUE	canonical	3	64	junction_5	8.06903804675625	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGGTTGTGTCCATGAT	NA	False	NA	NA	False	AATAAA	-17	NA	104967094	104886845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
Isoform_126510_26	chr4	-	3273	12	FSM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	238	10	238	-10	multi-exon	FALSE	canonical	1	3	junction_11	3.44016144153173	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGACTCAGAGGCTGCCT	NA	False	NA	NA	False	AATAAA	-23	NA	106321288	106299535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033_106316226_106320891
Isoform_126511_33	chr4	-	2784	4	FSM	ENSMUSG00000025418.8	ENSMUST00000054472.4	2756	4	-38	10	-38	-10	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAAAAGGTCACCTTT	NA	False	NA	NA	False	NA	NA	NA	106349518	106340662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106342643_106343780_106344036_106345175_106345268_106349061
Isoform_126512_20	chr4	-	2058	8	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	1445	-401	1445	0	3prime_fragment	FALSE	canonical	1	5	junction_3	4.52656557650139	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGTTCTACCAGTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	106472990	106448105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_106448885_106464485_106464620_106467596_106467723_106468609_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535
Isoform_126514_726	chr4	-	2073	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	45	3	2	1	multi-exon	FALSE	canonical	3	276	junction_4	15.561903466677	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGTGTTGTTTGTGT	NA	False	NA	-2	True	ATTAAA	-38	NA	106536096	106519455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
Isoform_126515_31	chr4	-	2529	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	46	-454	3	454	multi-exon	TRUE	canonical	3	276	junction_4	15.561903466677	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	106536095	106518998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
Isoform_126520_34	chr4	-	2524	9	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-1	2	intron_retention	FALSE	canonical	3	276	junction_3	16.3893067272536	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGTGTTGTTTGTGTC	NA	False	NA	-1	True	ATTAAA	-39	NA	106536087	106519454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_106520429_106522852_106522936_106524692_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
Isoform_126525_39	chr4	-	2687	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	53	2949	-3	-113	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACGTCAGTGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	106656990	106604700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
Isoform_126526_17	chr4	-	3000	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	10	2679	7	1	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTGTGGCTTATTGT	NA	False	NA	NA	False	NA	NA	NA	106657033	106604430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
Isoform_126527_3	chr4	-	3315	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	-3	2377	-3	303	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTGCCTTGTGTATGC	NA	False	NA	NA	False	NA	NA	NA	106657046	106604128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
Isoform_126528_5	chr4	-	5649	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	36	4	-20	-4	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAGCATGTTTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	106657007	106601755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
Isoform_126530_3	chr4	-	1790	9	NNC	ENSMUSG00000034853.17	novel	2620	14	NA	NA	-1420	-116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.4400459121974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGGACGTCAGTGTTTT	2659	False	NA	NA	False	NA	NA	NA	106614577	106604703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106614507
Isoform_126533_11	chr4	-	2469	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	12	-983	12	983	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTGATGGGTATGT	NA	False	NA	NA	False	NA	NA	NA	106924053	106912087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
Isoform_126534_898	chr4	-	1476	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	14	8	14	3	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGAGATTGTCTGTG	NA	False	NA	-16	True	AATAAA	-15	NA	106924051	106913078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
Isoform_126542_54	chr4	-	1537	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	228	4666	-36	449	multi-exon	FALSE	canonical	3	63	junction_1	11	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAGGCATAGTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	107035516	106996017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
Isoform_126543_10	chr4	-	1823	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	-58	4666	-58	449	multi-exon	FALSE	canonical	3	63	junction_1	11	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAGGCATAGTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	107035802	106996017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
Isoform_126549_73	chr4	-	1716	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	38	1	38	-1	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCTTTTGAATTGCAG	NA	False	NA	-6	True	AATAAA	-19	NA	107110691	107090711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
Isoform_126550_284	chr4	-	1674	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	80	1	80	-1	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCTTTTGAATTGCAG	NA	False	NA	-6	True	AATAAA	-19	NA	107110649	107090711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
Isoform_126551_5	chr4	-	1539	7	NIC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	80	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_5	74.8852826365472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTGCTTTTGAATTG	NA	False	NA	-9	True	AATAAA	-16	NA	107110649	107090714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107104490_107104978_107110471
Isoform_126554_9	chr4	-	1670	4	FSM	ENSMUSG00000028610.17	ENSMUST00000069271.5	1861	4	188	3	188	-3	multi-exon	FALSE	canonical	3	6	junction_2	4.18993502999218	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTGTGAAAGCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	107541239	107533491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_107534267_107536449_107536673_107537842_107538052_107540776
Isoform_126556_31	chr4	-	3171	4	NIC	ENSMUSG00000073779.8	novel	3078	3	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	1.63299316185545	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCCCACCTGTGTCCCT	4050	False	NA	NA	False	NA	NA	NA	107680179	107663237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_107666035_107667959_107668144_107673123_107673265_107680130
Isoform_126557_463	chr4	-	2321	5	FSM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	50	1	0	1	multi-exon	FALSE	canonical	3	130	junction_2	11.5866302262565	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGTTCCTTTTTCCTT	NA	False	NA	-1	True	AATAAA	-17	NA	107780757	107761178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_107761761_107764117_107765423_107769837_107769945_107771460_107771542_107780511
Isoform_126559_6	chr4	-	2428	5	NNC	ENSMUSG00000028607.17	novel	2372	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	63.0257883726971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGTTCCTTTTTCCTT	NA	False	NA	-1	True	AATAAA	-17	NA	107780757	107761178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_107761761_107764117_107765423_107769837_107770052_107771460_107771542_107780511
Isoform_126572_507	chr4	-	2617	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	22	1	-6	-1	multi-exon	TRUE	canonical	3	305	junction_7	132.795314509043	507	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGCTTTTACTGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	107975707	107901036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
Isoform_126578_85	chr4	-	2499	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-106	-110	20	110	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGACTGGTTACTTTTCTC	5563	False	NA	-4	True	NA	NA	NA	108075225	108038824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
Isoform_126580_5	chr4	-	2661	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-142	-236	-16	236	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGAAATGATTGGGTC	5527	False	NA	NA	False	NA	NA	NA	108075261	108038698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
Isoform_126583_8	chr4	-	2470	13	NIC	ENSMUSG00000034645.15	novel	2283	14	NA	NA	-9	114	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	23.8692910568277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTACTTTTCTCTGTG	5534	False	NA	0	True	NA	NA	NA	108075254	108038820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_108039111_108040844_108040943_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
Isoform_126585_4	chr4	-	2431	14	FSM	ENSMUSG00000034645.15	ENSMUST00000106690.9	2421	14	-10	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	23.6810662641758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTTTTCTTTTAG	5533	False	NA	NA	False	TTTAAA	-19	NA	108075255	108039130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108039319_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
Isoform_126587_13	chr4	-	2252	11	ISM	ENSMUSG00000034645.15	ENSMUST00000106690.9	2421	14	-26	5153	-26	-5153	5prime_fragment	FALSE	canonical	1	26	junction_5	16.8110082981361	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTTTGTTTTTTATTT	5517	False	NA	NA	False	NA	NA	NA	108075271	108044283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
Isoform_126593_93	chr4	-	5507	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	3	3181	3	-3181	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCTGGGTTTTGTGTA	NA	False	NA	-4	True	AATAAA	-18	NA	108158290	108090101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
Isoform_126594_8	chr4	-	3111	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	-24	5604	-24	-5604	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTGGGGTGTGGCTC	NA	False	NA	NA	False	AATACA	-32	NA	108158317	108092524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
Isoform_126596_58	chr4	-	8665	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	19	7	19	-7	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAAGTGTGGTCTACTT	NA	False	NA	-4	True	AATAAA	-14	NA	108158274	108086927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
Isoform_126597_5	chr4	-	2467	12	ISM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	6	11746	6	-4	5prime_fragment	FALSE	canonical	1	32	junction_6	24.3177994872239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108158287	108098666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
Isoform_126598_5	chr4	-	790	3	FSM	ENSMUSG00000059816.6	ENSMUST00000053157.7	593	3	-189	-8	-189	8	multi-exon	FALSE	canonical	3	46	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTGGAATCTCTTTT	NA	False	NA	-3	True	AATAAA	-14	NA	108240735	108224965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108225239_108234543_108234684_108240358
Isoform_126599_15	chr4	-	710	3	FSM	ENSMUSG00000059816.6	ENSMUST00000053157.7	593	3	-107	-10	-107	10	multi-exon	FALSE	canonical	3	46	junction_2	6	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGAATCTCTTTTTT	NA	False	NA	-1	True	AATAAA	-16	NA	108240653	108224963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108225239_108234543_108234684_108240358
Isoform_126602_105	chr4	-	1014	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	252	23	15	-23	multi-exon	FALSE	canonical	3	159	junction_2	16.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTAGCCCGTGGAAAC	NA	False	NA	-34	True	AATAAA	-17	NA	108263906	108257609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108258195_108260397_108260660_108263739
Isoform_126603_3	chr4	-	1312	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	-46	23	-46	-23	multi-exon	FALSE	canonical	3	159	junction_2	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTAGCCCGTGGAAAC	NA	False	NA	-34	True	AATAAA	-17	NA	108264204	108257609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108258195_108260397_108260660_108263739
Isoform_126605_428	chr4	-	1482	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	34	0	34	0	multi-exon	TRUE	canonical	3	462	junction_7	44.4233283170614	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	-8	True	ATTAAA	-20	NA	108436499	108422066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
Isoform_126607_269	chr4	-	1504	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	9	3	9	0	multi-exon	FALSE	canonical	3	462	junction_7	44.4233283170614	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTGGCTTTTTGTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	108436524	108422069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
Isoform_126608_5	chr4	-	5038	19	FSM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	39	1382	39	411	multi-exon	FALSE	canonical	2	6	junction_1	6.31771954481311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTGTACAGAACTGGCA	673	False	NA	1	True	AATAAA	-22	NA	108637956	108496044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
Isoform_126610_6	chr4	-	3245	9	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	48	47407	48	-45614	5prime_fragment	FALSE	canonical	3	17	junction_6	3.56852560590505	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACTTTTTAGAGGCCTT	682	False	NA	NA	False	TTTAAA	-2	NA	108637947	108542069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
Isoform_126611_3	chr4	-	3376	9	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-83	47407	-83	-45614	5prime_fragment	FALSE	canonical	3	17	junction_6	3.56852560590505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACTTTTTAGAGGCCTT	551	False	NA	NA	False	TTTAAA	-2	NA	108638078	108542069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
Isoform_126617_41	chr4	-	1328	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-20	-275	-20	275	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTTTTTTTCCTAACA	NA	False	NA	NA	False	AATAAA	-18	NA	108690781	108673639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
Isoform_126618_28	chr4	-	2533	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-8	-1492	-8	-931	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGAGATATTTCCTCT	NA	False	NA	-32	True	AATAAA	-25	NA	108690769	108672422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
Isoform_126625_330	chr4	-	2201	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	42	898	-8	-898	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGTCTTTTCTATTTC	NA	False	NA	1	True	AATAAA	-45	NA	108690769	108672389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_126626_36	chr4	-	2244	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-29	926	-29	-926	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATATTTCCTCTAGTGC	NA	False	NA	-27	True	AATAAA	-30	NA	108690840	108672417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_126627_15	chr4	-	3116	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	26	-1	-24	1	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGTGGTTGTTAAAT	NA	False	NA	-2	True	ATTAAA	-15	NA	108690785	108671490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_126628_78	chr4	-	2624	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	51	466	1	-466	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGCATTTTGATCAC	NA	False	NA	-25	True	AATAAA	-16	NA	108690760	108671957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_126636_12	chr4	-	2687	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-12	466	-12	-466	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGCATTTTGATCAC	NA	False	NA	-25	True	AATAAA	-16	NA	108690823	108671957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_126642_22	chr4	-	2189	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	7	938	7	-4	multi-exon	FALSE	canonical	1	25	junction_18	113.002776514562	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGGCAGTTACAATTTT	NA	False	NA	-2	True	ATTAAA	-25	NA	108975212	108919279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
Isoform_126643_49	chr4	-	2550	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	79	505	79	0	multi-exon	FALSE	canonical	1	25	junction_18	113.002776514562	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	108975140	108918846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
Isoform_126644_21	chr4	-	2833	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	39	-1	1	1	multi-exon	FALSE	canonical	1	25	junction_18	119.667039647815	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTCTTTCATTG	NA	False	NA	-5	True	CATAAA	-21	NA	109059430	108918850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
Isoform_126647_276	chr4	-	2507	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	93	4	79	1	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTCTTTCATTG	NA	False	NA	-5	True	CATAAA	-21	NA	108975140	108918850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
Isoform_126649_9	chr4	-	2291	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	-9	322	-9	2	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTCAGCTTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	108975242	108919168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
Isoform_126651_9	chr4	-	2742	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	93	-231	79	196	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTGGTGCTATAACAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	108975140	108918615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
Isoform_126652_106	chr4	-	2794	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	39	-425	1	1	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTCTTTCATTG	NA	False	NA	-5	True	CATAAA	-21	NA	109059430	108918850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
Isoform_126654_236	chr4	-	2603	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-3	1461	-3	340	multi-exon	FALSE	canonical	3	201	junction_2	15	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGCTGAAGTTGTGCC	NA	False	NA	-13	True	AGTAAA	-8	NA	109333875	109309755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_109311620_109314094_109314265_109333306
Isoform_126655_17	chr4	-	4050	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	17	-6	17	6	multi-exon	FALSE	canonical	3	201	junction_2	15	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGAGTGGCCTGTGAT	NA	False	NA	0	True	AGTAAA	-22	NA	109333855	109308288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_109311620_109314094_109314265_109333306
Isoform_126658_20	chr4	-	2801	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-3	1263	-3	538	multi-exon	FALSE	canonical	3	201	junction_2	15	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTACTGAACTGAGTGC	NA	False	NA	NA	False	NA	NA	NA	109333875	109309557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_109311620_109314094_109314265_109333306
Isoform_126665_10	chr4	-	2506	2	FSM	ENSMUSG00000028551.15	ENSMUST00000063531.5	1106	2	-1402	2	415	-2	multi-exon	FALSE	canonical	3	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACATTTTCCTGTGATT	7258	False	NA	NA	False	ATTAAA	-20	NA	109523971	109518074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_109518824_109522214
Isoform_126666_86	chr4	-	2057	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	414	0	414	0	multi-exon	FALSE	canonical	3	20	junction_2	1	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	7257	False	NA	NA	False	ATTAAA	-22	NA	109523972	109518072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_109518824_109522214_109522355_109522806
Isoform_126668_18	chr4	-	3808	7	NIC	ENSMUSG00000028546.18	novel	3997	7	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.286182749473	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGCTTCCCAAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	110209116	110060935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
Isoform_126672_8	chr4	-	3777	6	FSM	ENSMUSG00000028546.18	ENSMUST00000106603.9	3761	6	-16	0	-16	0	multi-exon	FALSE	canonical	3	15	junction_1	6.48074069840786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110209122	110060933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
Isoform_126673_3	chr4	-	3876	7	NIC	ENSMUSG00000028546.18	novel	4149	7	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.852097798374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110209140	110060933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_110063899_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
Isoform_126675_485	chr4	-	1873	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	-6	1303	-6	-1303	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTTTCTTTCTTTAAA	NA	False	NA	-6	True	AATAAA	-13	NA	114844444	114817835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
Isoform_126682_4	chr4	-	4059	6	NNC	ENSMUSG00000028707.16	novel	4017	5	NA	NA	-65	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.01980390271856	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTGATCCATCTTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	115797188	115772316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_115774672_115774693_115775603_115777170_115777514_115777729_115777909_115780845_115781012_115797081
Isoform_126683_59	chr4	-	2482	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	224	1121	-5	403	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTGGCTGGGATATC	NA	False	NA	NA	False	NA	NA	NA	115874899	115854986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
Isoform_126684_4	chr4	-	3009	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	-303	1121	-303	403	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTGGCTGGGATATC	NA	False	NA	NA	False	NA	NA	NA	115875426	115854986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
Isoform_126685_9	chr4	-	3632	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	195	0	-4	0	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAGAGTGAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	115874928	115853865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
Isoform_126686_22	chr4	-	2506	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	200	1121	1	403	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTGGCTGGGATATC	NA	False	NA	NA	False	NA	NA	NA	115874923	115854986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
Isoform_126688_23	chr4	-	3602	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	224	1	-5	-1	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAGAGTGAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	115874899	115853866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
Isoform_126690_235	chr4	-	2208	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	67	164	67	-1	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTGTGTGCGTGCCTT	NA	False	NA	-7	True	AGTAAA	-16	NA	115911006	115890202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
Isoform_126691_18	chr4	-	2236	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	39	164	39	-1	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTGTGTGCGTGCCTT	NA	False	NA	-7	True	AGTAAA	-16	NA	115911034	115890202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
Isoform_126693_4	chr4	-	1552	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	-10	897	-10	168	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGGGTGGGCCTGCAGT	NA	False	NA	-30	True	AATAAA	-14	NA	115911083	115890935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
Isoform_126697_10	chr4	-	588	4	FSM	ENSMUSG00000063882.13	ENSMUST00000134760.2	579	4	-10	1	-10	0	multi-exon	FALSE	canonical	3	10	junction_2	488.184618993903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	7684	False	NA	-8	True	AATAAA	-16	NA	115932241	115924162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115924370_115927059_115927222_115927864_115927955_115932112
Isoform_126698_47	chr4	-	555	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	-10	2	-10	-1	multi-exon	FALSE	canonical	3	1017	junction_2	25.9272486435067	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTTTGTCCTTCCTTTG	7647	False	NA	-9	True	AATAAA	-15	NA	115932278	115924163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
Isoform_126699_551	chr4	-	509	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	37	1	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	25.9272486435067	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	7694	False	NA	-8	True	AATAAA	-16	NA	115932231	115924162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
Isoform_126708_26	chr4	-	5749	18	FSM	ENSMUSG00000028702.16	ENSMUST00000102704.4	3025	18	-11	-2713	-11	2	multi-exon	FALSE	canonical	3	379	junction_11	50.1315225199974	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCAGGGGTTGTTTGC	NA	False	NA	-10	True	AATAAA	-22	NA	115980867	115951458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
Isoform_126713_174	chr4	-	2726	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	15	39	-11	20	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	-35	True	NA	NA	NA	115980867	115954151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
Isoform_126714_26	chr4	-	5420	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	15	-2655	-11	3	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCAGGGGTTGTTTGCT	NA	False	NA	-9	True	AATAAA	-23	NA	115980867	115951457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
Isoform_126717_244	chr4	-	2704	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	20	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_18	100.421042627873	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	-35	True	NA	NA	NA	115980867	115954151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
Isoform_126719_29	chr4	-	5402	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	7	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGGGTTGTTTGCTGTGT	NA	False	NA	-5	True	AATAAA	-27	NA	115980867	115951453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
Isoform_126725_3	chr4	-	812	2	FSM	ENSMUSG00000028701.5	ENSMUST00000030469.5	5742	2	38	4892	38	222	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTACTTTGTGGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	116001768	115994494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_115995032_116001493
Isoform_126726_8	chr4	-	1233	8	FSM	ENSMUSG00000028699.10	ENSMUST00000030465.10	1985	8	4	748	4	691	multi-exon	FALSE	canonical	0	0	junction_3	1.48461497791618	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTAATTGACCTG	NA	False	NA	NA	False	TATAAA	-8	NA	116024793	116019813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116020233_116020503_116020588_116020824_116020978_116021058_116021158_116021263_116021339_116021515_116021723_116024204_116024270_116024662
Isoform_126729_127	chr4	-	5738	29	NIC	ENSMUSG00000003810.14	novel	5292	30	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	46.5144672469255	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8452	False	NA	-2	True	AATACA	-16	NA	116321415	116163958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
Isoform_126733_13	chr4	-	5729	29	NIC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_26	59.5179080407823	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8460	False	NA	-3	True	AATACA	-15	NA	116321407	116163959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248829_116287602_116287746_116292640_116292789_116320932
Isoform_126735_268	chr4	-	5744	29	FSM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-39	0	-39	0	multi-exon	FALSE	canonical	3	226	junction_2	30.4319246978617	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8448	False	NA	-3	True	AATACA	-15	NA	116321419	116163959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
Isoform_126736_8	chr4	-	5790	29	FSM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-85	0	-85	0	multi-exon	FALSE	canonical	3	226	junction_2	30.4319246978617	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8402	False	NA	-3	True	AATACA	-15	NA	116321465	116163959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
Isoform_126739_22	chr4	-	2394	10	ISM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-36	14602	-36	1069	5prime_fragment	FALSE	canonical	3	250	junction_7	35.0442401177725	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTCTCTGGGAGGA	8451	False	NA	NA	False	NA	NA	NA	116321416	116178561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
Isoform_126741_15	chr4	-	4433	6	ISM	ENSMUSG00000003810.14	ENSMUST00000106486.8	5723	30	-34	27199	-34	-729	5prime_fragment	FALSE	canonical	3	250	junction_3	29.9639783740411	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGAAACAGGCTTCCCA	8453	False	NA	NA	False	NA	NA	NA	116321414	116191158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
Isoform_126744_3	chr4	-	1803	3	FSM	ENSMUSG00000055900.15	ENSMUST00000069674.6	974	3	-5	-824	-4	-226	multi-exon	TRUE	canonical	3	51	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTATTTCA	NA	False	NA	NA	False	NA	NA	NA	116413137	116409327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116410927_116411964_116412101_116413069
Isoform_126789_344	chr4	-	3090	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	448	-558	0	1	3prime_fragment	TRUE	canonical	3	774	junction_12	215.450595691155	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCTTGTTCTGGAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	116484690	116458247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
Isoform_126790_1134	chr4	-	2532	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	448	0	0	0	3prime_fragment	FALSE	canonical	3	774	junction_12	215.450595691155	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116484690	116458805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
Isoform_126791_46	chr4	-	2564	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	416	0	-28	0	3prime_fragment	FALSE	canonical	3	774	junction_12	215.450595691155	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116484722	116458805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
Isoform_126798_39	chr4	-	3126	14	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	774	junction_11	207.002729879378	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116484690	116458805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
Isoform_126800_38	chr4	-	1557	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	4	557	0	0	multi-exon	FALSE	canonical	3	48	junction_9	345.747385294336	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116484690	116458805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
Isoform_126820_1730	chr4	-	1369	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	53	-2	53	2	multi-exon	FALSE	canonical	3	1447	junction_3	104.145331148352	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGCCTGACTTACT	NA	False	NA	1	True	AATAAA	-17	NA	116508824	116493704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
Isoform_126821_321	chr4	-	1400	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	20	0	20	0	multi-exon	FALSE	canonical	3	1447	junction_3	104.145331148352	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	-1	True	AATAAA	-15	NA	116508857	116493706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
Isoform_126831_136	chr4	-	1876	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	75	155	-43	-155	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTTGTTTGCCTGTTT	NA	False	NA	-2	True	AATACA	-31	NA	116565528	116559630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
Isoform_126832_28	chr4	-	2392	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	75	-361	-43	361	multi-exon	TRUE	canonical	3	184	junction_2	7.07106781186548	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATATCTAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	116565528	116559114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
Isoform_126833_6	chr4	-	1952	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	-1	155	-1	-155	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTTGTTTGCCTGTTT	NA	False	NA	-2	True	AATACA	-31	NA	116565604	116559630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
Isoform_126840_306	chr4	-	2043	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	47	0	13	0	multi-exon	FALSE	canonical	3	103	junction_2	11.8252583351856	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1986	False	NA	0	True	TTTAAA	-42	NA	116664790	116661198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
Isoform_126844_13	chr4	-	1994	8	NNC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	259	0	intron_retention	FALSE	canonical	2	4	junction_7	42.0500188065672	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	2290	False	NA	0	True	TTTAAA	-42	NA	116664486	116661198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664409
Isoform_126845_15	chr4	-	2045	8	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	-2	0	intron_retention	FALSE	canonical	2	10	junction_7	40.0209129004794	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	2029	False	NA	0	True	TTTAAA	-42	NA	116664747	116661198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
Isoform_126853_208	chr4	-	1216	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	21	252	-12	0	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	116851589	116847413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
Isoform_126854_213	chr4	-	1189	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	53	247	-3	5	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTCTTTTGTAAAGGC	NA	False	NA	-14	True	AATAAA	-21	NA	116851557	116847408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
Isoform_126855_21	chr4	-	1464	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	21	4	-12	-4	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCAGCCCGGCTCCTTTGT	NA	False	NA	-12	True	NA	NA	NA	116851589	116847165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
Isoform_126856_28	chr4	-	1441	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	48	0	-1	0	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGGCTCCTTTGTTCCT	NA	False	NA	-8	True	NA	NA	NA	116851562	116847161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
Isoform_126858_9	chr4	-	2646	8	FSM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	-70	-956	-30	0	multi-exon	FALSE	canonical	2	11	junction_7	6.73401357108153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAATGTCAGCATTCAA	9677	False	NA	-14	True	NA	NA	NA	116982885	116976415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135_116981338_116982525
Isoform_126860_4	chr4	-	2432	7	NIC	ENSMUSG00000073771.12	novel	1620	8	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	7.02376916856849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTAATGTCAGCATTCA	9688	False	NA	-15	True	NA	NA	NA	116982874	116976416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116982525
Isoform_126861_23	chr4	-	1748	2	ISM	ENSMUSG00000073771.12	ENSMUST00000153924.8	1956	4	1028	0	-37	0	3prime_fragment	FALSE	canonical	3	41	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAATGTCAGCATTCAA	NA	False	NA	-14	True	NA	NA	NA	116978499	116976415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_116978059_116978394
Isoform_126863_149	chr4	-	2409	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	-32	1	-32	-1	multi-exon	FALSE	canonical	3	135	junction_10	17.1138146846699	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGCCTTATCATTC	3187	False	NA	1	True	AATAAA	-14	NA	116991192	116985852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
Isoform_126864_41	chr4	-	2460	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	-83	1	-83	-1	multi-exon	FALSE	canonical	3	135	junction_10	17.1138146846699	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGCCTTATCATTC	3136	False	NA	1	True	AATAAA	-14	NA	116991243	116985852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
Isoform_126865_296	chr4	-	2374	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	3	1	3	-1	multi-exon	TRUE	canonical	3	135	junction_10	17.1138146846699	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGCCTTATCATTC	3222	False	NA	1	True	AATAAA	-14	NA	116991157	116985852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
Isoform_126869_6	chr4	-	2671	14	NIC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	-50	-1	intron_retention	FALSE	canonical	3	135	junction_9	16.9684705876175	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGCCTTATCATTC	3169	False	NA	1	True	AATAAA	-14	NA	116991210	116985852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
Isoform_12688_361	chr11	-	2368	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	2	0	2	0	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTCTTGACCTTGAGT	NA	False	NA	-11	True	AATAAA	-16	NA	51497672	51490926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
Isoform_126881_2223	chr4	-	694	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	159	7	0	0	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	2223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTAGGTGTTTGGAG	NA	False	NA	-20	True	AATAAA	-23	NA	117013281	117011030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
Isoform_126882_63	chr4	-	870	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	-17	7	-17	0	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTAGGTGTTTGGAG	NA	False	NA	-20	True	AATAAA	-23	NA	117013457	117011030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
Isoform_126883_894	chr4	-	740	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	108	12	-51	-5	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGCTGTCTAGGTGTT	NA	False	NA	-25	True	AATAAA	-18	NA	117013332	117011035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
Isoform_126898_632	chr4	-	2770	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	72	0	-25	0	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	632	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCAGATTCTGTGTGA	NA	False	NA	88	True	AATAAA	-17	NA	117039764	117016835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
Isoform_126915_25	chr4	-	2617	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	2	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	414.939332915066	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGTCTGTGTTTGAA	9576	False	NA	NA	False	ATTAAA	-13	NA	117146637	117128661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117145559_117146266_117146395
Isoform_126916_29	chr4	-	2619	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	400.454354452539	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9566	False	NA	NA	False	ATTAAA	-9	NA	117146647	117128665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117145559_117146266_117146399
Isoform_126918_109	chr4	-	1808	10	ISM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	278	-3	-55	3	3prime_fragment	FALSE	canonical	0	0	junction_5	318.755914977798	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9848	False	NA	NA	False	ATTAAA	-9	NA	117146365	117128665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
Isoform_126919_24	chr4	-	2082	10	ISM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	4	-3	0	3	intron_retention	FALSE	canonical	0	0	junction_5	318.755914977798	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9574	False	NA	NA	False	ATTAAA	-9	NA	117146639	117128665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
Isoform_126922_511	chr4	-	1954	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	343.341753942045	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGTCTGTGTTTGAA	9576	False	NA	NA	False	ATTAAA	-13	NA	117146637	117128661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146395
Isoform_126925_853	chr4	-	1946	11	FSM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	6	-3	2	3	multi-exon	FALSE	canonical	0	0	junction_5	319.717437747771	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9576	False	NA	NA	False	ATTAAA	-9	NA	117146637	117128665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
Isoform_126929_121	chr4	-	3098	15	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	471.87085313761	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	NA	False	NA	NA	False	ATTAAA	-9	NA	117354246	117128665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
Isoform_126938_45	chr4	-	1739	10	ISM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	207875	6	-64	3	3prime_fragment	FALSE	canonical	0	0	junction_5	365.792425790136	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9839	False	NA	NA	False	ATTAAA	-9	NA	117146374	117128665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222
Isoform_126939_130	chr4	-	1872	11	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	375.814528723944	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9576	False	NA	NA	False	ATTAAA	-9	NA	117146637	117128665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146395
Isoform_126940_261	chr4	-	1868	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	357.390878451032	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9576	False	NA	NA	False	ATTAAA	-9	NA	117146637	117128665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146399
Isoform_126944_52	chr4	-	3020	15	FSM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	3	6	3	3	multi-exon	FALSE	canonical	0	0	junction_5	470.113273367088	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	NA	False	NA	NA	False	ATTAAA	-9	NA	117354246	117128665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
Isoform_126951_14	chr4	-	2352	3	NNC	ENSMUSG00000028677.20	novel	458	2	NA	NA	3	1929	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAACCTGCCTTGTAAA	NA	False	NA	-7	True	AATAAA	-11	NA	117354246	117345502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_117346346_117346385_117347528_117353879
Isoform_126953_130	chr4	-	1528	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	33	5	13	0	multi-exon	FALSE	canonical	3	80	junction_10	49.3527101586124	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGATTGTTTCCTCA	NA	False	NA	-40	True	AATAGA	-15	NA	117539437	117531882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
Isoform_126954_98	chr4	-	1541	11	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_10	51.6295458047037	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539434	117531877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
Isoform_126955_3	chr4	-	1720	9	ISM	ENSMUSG00000009640.12	ENSMUST00000135582.8	1771	10	269	2	-1	-2	3prime_fragment	FALSE	canonical	3	219	junction_4	16.9779268463496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGATTGTTTCCTCACTT	NA	False	NA	-37	True	AATAGA	-18	NA	117539181	117531879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029
Isoform_126957_3	chr4	-	1763	10	FSM	ENSMUSG00000009640.12	ENSMUST00000135582.8	1771	10	6	2	6	-2	multi-exon	FALSE	canonical	3	72	junction_9	54.4190416928251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGATTGTTTCCTCACTT	NA	False	NA	-37	True	AATAGA	-18	NA	117539444	117531879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
Isoform_126958_4	chr4	-	1708	10	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	80	junction_9	52.0208884920872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTTTCCTCACTTC	NA	False	NA	-36	True	AATAGA	-19	NA	117539467	117531878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
Isoform_126959_3	chr4	-	1687	10	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	-16	0	intron_retention	FALSE	canonical	3	72	junction_9	54.4222176852228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539434	117531877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
Isoform_126960_5	chr4	-	4452	14	NIC	ENSMUSG00000028541.15	novel	4093	13	NA	NA	1	-3	intron_retention	FALSE	canonical	1	2	junction_3	33.2134926599802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTAGTTCTGCACACA	NA	False	NA	NA	False	ATTAAA	-15	NA	117740672	117726459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117727026_117727106_117727186_117727302_117727373_117727712_117727768_117728260_117728387_117728943_117729058_117729185_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
Isoform_126961_164	chr4	-	2285	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	27	0	16	0	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	False	NA	-9	True	AGTAAA	-17	NA	117740657	117730327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
Isoform_126962_50	chr4	-	2414	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	19	-121	8	11	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGGAGAAAGTTTTATC	NA	False	NA	-7	True	AATAAA	-27	NA	117740665	117730206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
Isoform_126965_7	chr4	-	1746	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	-3	569	-3	-398	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCAGCATTCACTTTGA	NA	False	NA	NA	False	AATAGA	-15	NA	117740687	117730896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
Isoform_126966_3	chr4	-	2382	7	ISM	ENSMUSG00000028541.15	ENSMUST00000084325.10	4093	13	-321	3748	0	13	5prime_fragment	FALSE	canonical	2	4	junction_6	25.0044440494529	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGAGAAAGTTTTATCTT	NA	False	NA	-5	True	AATAAA	-29	NA	117740673	117730204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117740298
Isoform_126967_4	chr4	-	2258	7	ISM	ENSMUSG00000028541.15	ENSMUST00000084325.10	4093	13	-320	3871	1	0	5prime_fragment	FALSE	canonical	2	4	junction_6	25.0044440494529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	False	NA	-9	True	AGTAAA	-17	NA	117740672	117730327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117740298
Isoform_126968_3	chr4	-	2327	8	FSM	ENSMUSG00000028541.15	ENSMUST00000106421.9	1801	8	-355	-171	9	0	multi-exon	FALSE	canonical	1	1	junction_6	24.2630146014674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	False	NA	-9	True	AGTAAA	-17	NA	117740664	117730327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738903_117738972_117739015_117740298
Isoform_126969_4	chr4	-	2543	9	NNC	ENSMUSG00000028541.15	novel	2466	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	30.4340988859536	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCCTTGTCTGTCTGTG	NA	False	NA	-10	True	AGTAAA	-16	NA	117740672	117730328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_117731201_117731590_117731835_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
Isoform_126970_3	chr4	-	5164	7	NIC	ENSMUSG00000028541.15	novel	2312	8	NA	NA	10	-3	intron_retention	FALSE	canonical	3	58	junction_1	9.15908777602272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCCCTTGTCTGTCTG	NA	False	NA	-12	True	AGTAAA	-14	NA	117740663	117730330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
Isoform_126971_39	chr4	-	2529	2	ISM	ENSMUSG00000033379.14	ENSMUST00000150204.8	935	7	4	-7	4	0	intron_retention	FALSE	canonical	3	2592	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744513	117741522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117741839_117742300
Isoform_126973_24	chr4	-	2194	3	FSM	ENSMUSG00000033379.14	ENSMUST00000152356.2	560	3	-1515	-119	5	0	multi-exon	FALSE	canonical	3	2551	junction_2	20.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744512	117741522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117741839_117742300_117742492_117742825
Isoform_126974_36	chr4	-	2072	4	FSM	ENSMUSG00000033379.14	ENSMUST00000133530.8	646	4	-1422	-4	4	0	multi-exon	FALSE	canonical	3	2536	junction_3	23.6690139681023	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744513	117741522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000
Isoform_126978_141	chr4	-	1517	7	ISM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	14	0	5	0	intron_retention	FALSE	canonical	3	2536	junction_3	83.3979749287848	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744512	117741522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786
Isoform_126980_1472	chr4	-	986	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	14	0	5	0	multi-exon	FALSE	canonical	3	2123	junction_7	187.196393650942	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744512	117741522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
Isoform_126983_55	chr4	-	1045	8	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_7	877.288982709616	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744515	117741522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743892_117744366
Isoform_126984_27	chr4	-	1094	8	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-36	-2	combination_of_known_junctions	FALSE	canonical	3	113	junction_7	877.288982709616	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGAGGCTTCTGTTGGCC	NA	False	NA	-3	True	AATAAA	-19	NA	117744566	117741524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743892_117744366
Isoform_126985_22	chr4	-	1954	5	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2536	junction_3	20.8386659841747	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744525	117741522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743343_117743472
Isoform_126996_294	chr4	-	2278	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	12	265	0	-1	multi-exon	FALSE	canonical	3	66	junction_1	6.70522184569608	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTTTCTCTTTATTCA	NA	False	NA	-8	True	AATAAA	-14	NA	117749217	117746104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
Isoform_126997_4	chr4	-	2575	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	-21	1	-21	-1	multi-exon	TRUE	canonical	3	66	junction_1	6.70522184569608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTTGGGCCTAAACAA	NA	False	NA	NA	False	AATAAA	-12	NA	117749250	117745840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
Isoform_126998_19	chr4	-	2283	6	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	27.9399355761605	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTCTTTATTCACTAA	NA	False	NA	-4	True	AATAAA	-18	NA	117749229	117746100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748917
Isoform_126999_5	chr4	-	2466	5	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	4	-2	intron_retention	FALSE	canonical	3	66	junction_1	6.75925291729789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTTTCTCTTTATTC	NA	False	NA	-9	True	AATAAA	-13	NA	117749213	117746105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117746874_117746951_117747129_117747214_117748316_117748511_117748625_117748906
Isoform_127_321	ERCC-00111	+	977	1	FSM	ERCC-00111A	DQ883685	978	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00111_+_0_1000
Isoform_127001_7	chr4	-	2776	3	NIC	ENSMUSG00000028540.7	novel	2558	4	NA	NA	-3	7	intron_retention	FALSE	canonical	3	66	junction_1	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTTATTCACTAAAGCT	NA	False	NA	0	True	AATAAA	-22	NA	117749232	117746096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117746874_117746951_117748625_117748906
Isoform_127002_8	chr4	-	2370	5	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	70	junction_2	5.11737237261468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTTTCTCTTTATTC	NA	False	NA	-9	True	AATAAA	-13	NA	117749232	117746105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
Isoform_127003_4	chr4	-	2647	3	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	82	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTTTCTCTTTATTCA	NA	False	NA	-8	True	AATAAA	-14	NA	117749229	117746104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117748316_117748511_117748625_117748906
Isoform_127005_15	chr4	-	3509	20	NIC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	17.6376266140367	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTCTGCCTCCTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	117772196	117751688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117751855_117751940_117752043_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
Isoform_127006_8	chr4	-	5360	19	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	7	6	7	-6	intron_retention	FALSE	canonical	3	50	junction_14	10.6920993099728	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTCTGCCTCCTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	117772189	117751688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969
Isoform_127008_124	chr4	-	3587	20	FSM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	2	6	2	-6	multi-exon	FALSE	canonical	3	46	junction_19	11.8213853822033	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTCTGCCTCCTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	117772194	117751688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
Isoform_127012_21	chr4	-	2148	8	NIC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	3674	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	28.2004486865448	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTCCTGTTGTTTT	3722	False	NA	-6	True	AATAAA	-13	NA	117821971	117789355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526
Isoform_127014_31	chr4	-	2679	13	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	23.5914297056273	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1841	False	NA	0	True	AATAAA	-19	NA	117992132	117789349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
Isoform_127015_4	chr4	-	2285	13	NIC	ENSMUSG00000028538.13	novel	2225	12	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	24.0801612674556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCCTGTTGTTTTCTCT	1889	False	NA	-2	True	AATAAA	-17	NA	117992084	117789351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991930
Isoform_127016_6	chr4	-	2648	13	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	26.6691405102518	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1858	False	NA	0	True	AATAAA	-19	NA	117992115	117789349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991600
Isoform_127017_15	chr4	-	2585	12	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	26.3545438866066	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTCCTGTTGTTTT	1881	False	NA	-6	True	AATAAA	-13	NA	117992092	117789355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
Isoform_127018_8	chr4	-	2236	12	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	26.8084728187943	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTCCTGTTGTTTT	1886	False	NA	-6	True	AATAAA	-13	NA	117992087	117789355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
Isoform_127019_14	chr4	-	2086	7	ISM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	170084	1	3650	-1	3prime_fragment	FALSE	canonical	3	57	junction_3	12.0473602456675	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGGCCTCCTGTTGTT	3698	False	NA	-8	True	AATAAA	-11	NA	117821995	117789357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526
Isoform_127021_7	chr4	-	1963	10	ISM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	80136	-3	-22872	3	3prime_fragment	FALSE	canonical	3	55	junction_9	13.0592193440704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTTTTCTCTGACT	3244	False	NA	2	True	AATAAA	-21	NA	117911951	117789347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846
Isoform_127022_60	chr4	-	2554	12	FSM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	35	junction_11	17.3052325722645	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1881	False	NA	-1	True	AATAAA	-18	NA	117992092	117789350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
Isoform_127023_38	chr4	-	2585	12	FSM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	-35	-1	-11	1	multi-exon	FALSE	canonical	3	35	junction_11	17.3052325722645	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1851	False	NA	0	True	AATAAA	-19	NA	117992122	117789349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
Isoform_127024_12	chr4	-	2239	12	FSM	ENSMUSG00000028538.13	ENSMUST00000106410.8	2225	12	-11	-3	-11	-1	multi-exon	FALSE	canonical	3	30	junction_11	18.1899981599189	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCCTGTTGTTTTCTCT	1851	False	NA	-2	True	AATAAA	-17	NA	117992122	117789351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991930
Isoform_127025_22	chr4	-	2197	12	FSM	ENSMUSG00000028538.13	ENSMUST00000106410.8	2225	12	27	1	3	-1	multi-exon	FALSE	canonical	3	30	junction_11	18.1899981599189	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTCCTGTTGTTTT	1889	False	NA	-6	True	AATAAA	-13	NA	117992084	117789355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991930
Isoform_127026_11	chr4	-	2571	12	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	22.3118394987545	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1850	False	NA	-1	True	AATAAA	-18	NA	117992123	117789350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991600
Isoform_127030_40	chr4	-	2551	11	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	21.0437639218843	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1836	False	NA	-1	True	AATAAA	-18	NA	117992137	117789350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
Isoform_127031_20	chr4	-	2208	11	FSM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	-59	-6	-27	0	multi-exon	FALSE	canonical	3	26	junction_9	21.8286508973871	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1835	False	NA	-1	True	AATAAA	-18	NA	117992138	117789350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
Isoform_127032_8	chr4	-	2550	11	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	25.6142538442954	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTCCTGTTGTTTT	1818	False	NA	-6	True	AATAAA	-13	NA	117992155	117789355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991600
Isoform_127033_8	chr4	-	2480	11	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	25.6142538442954	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1887	False	NA	-7	True	AATAAA	-12	NA	117992086	117789356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991600
Isoform_127037_3	chr4	-	3472	14	ISM	ENSMUSG00000033326.16	ENSMUST00000097911.9	4550	22	17093	-2	-904	0	3prime_fragment	FALSE	canonical	3	61	junction_6	10.9041005261334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGACTGTGGTCTGCCCC	9460	False	NA	-1	True	AATAAA	-16	NA	118019758	117994153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591
Isoform_127039_56	chr4	-	4504	22	NIC	ENSMUSG00000033326.16	novel	4550	22	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_21	14.8531740730846	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGTGCATTACCTTGT	NA	False	NA	-9	True	TATAAA	-15	NA	118036838	117994201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118036798
Isoform_127040_117	chr4	-	4585	22	FSM	ENSMUSG00000033326.16	ENSMUST00000106406.9	4663	22	31	47	31	2	multi-exon	FALSE	canonical	3	48	junction_21	11.6270464270502	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGTGCATTACCTTGTC	NA	False	NA	-8	True	TATAAA	-16	NA	118037209	117994200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118037089
Isoform_127086_9	chr4	-	7640	34	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	38	-5	combination_of_known_junctions	TRUE	canonical	2	4	junction_21	110.857091635313	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118148564	118065414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118085015_118085043_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
Isoform_127105_354	chr4	-	7622	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	29	5	29	-5	multi-exon	FALSE	canonical	3	357	junction_20	50.8611774834205	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118148573	118065414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
Isoform_127108_3	chr4	-	10958	72	FSM	ENSMUSG00000033253.19	ENSMUST00000075406.12	10965	72	6	1	6	-1	multi-exon	TRUE	canonical	1	1	junction_33	9.15204721689447	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTCAGTGTGATTTTAAT	3269	False	NA	-6	True	AATATA	-12	NA	118266464	118219940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245338_118245504_118245600_118245740_118245912_118246119_118246234_118246330_118246446_118246569_118246739_118246971_118247067_118247254_118247334_118247678_118247895_118247970_118248186_118248372_118248488_118248596_118248750_118248913_118249057_118249752_118249883_118250010_118250246_118250642_118250814_118251016_118251228_118254809_118254917_118255310_118255453_118256227_118256360_118259599_118259771_118260017_118260192_118262622_118262749_118266359
Isoform_127112_1179	chr4	-	1772	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	20	1	20	-1	multi-exon	FALSE	canonical	3	1043	junction_4	200.755117703013	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294529	118290098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
Isoform_127113_1719	chr4	-	1734	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	59	0	59	0	multi-exon	TRUE	canonical	3	1043	junction_4	200.755117703013	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294490	118290097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
Isoform_127114_232	chr4	-	1810	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	-17	0	-17	0	multi-exon	FALSE	canonical	3	1043	junction_4	200.755117703013	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294566	118290097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
Isoform_127128_8	chr4	-	1726	2	FSM	ENSMUSG00000050854.10	ENSMUST00000150044.2	717	2	57	-1066	57	-10	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTGTAGTTCTGTCTG	9148	False	NA	NA	False	AATAAA	-13	NA	118400102	118398147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_118399569_118399797
Isoform_127130_3	chr4	-	2389	4	NIC	ENSMUSG00000050854.10	novel	1864	4	NA	NA	29	631	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTACACAAAGCTAAAGGA	8354	False	NA	NA	False	AATAAA	-19	NA	118400896	118397506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_118399569_118399797_118399881_118400552_118400697_118400796
Isoform_127131_6	chr4	-	1869	4	FSM	ENSMUSG00000050854.10	ENSMUST00000060214.10	1864	4	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_3	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTCTGCACCATGGCA	8320	False	NA	NA	False	AATAAA	-23	NA	118400930	118398137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118400796
Isoform_127132_5	chr4	-	1853	4	FSM	ENSMUSG00000050854.10	ENSMUST00000128098.8	929	4	-12	-912	-12	-6	multi-exon	FALSE	canonical	2	4	junction_3	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCTGTCTGCACC	7997	False	NA	NA	False	AATAAA	-17	NA	118401253	118398143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118401129
Isoform_127134_34	chr4	-	1581	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	1	6	1	-3	multi-exon	FALSE	canonical	3	13	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACCTGTGTACTTATT	NA	False	NA	-4	True	AGTAAA	-13	NA	119031391	119026715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119028240_119031334
Isoform_127135_6	chr4	-	1071	4	ISM	ENSMUSG00000078584.10	ENSMUST00000144309.2	441	5	-2	-462	-2	372	intron_retention	FALSE	canonical	3	375	junction_1	15.4344492037203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTTGTCTTTCTTTGTG	NA	False	NA	-6	True	NA	NA	NA	119089884	119083206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550
Isoform_127137_198	chr4	-	766	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	25	6360	-2	180	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTAGCTGCTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	119089884	119083398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
Isoform_127138_89	chr4	-	958	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	25	6168	-2	372	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTTGTCTTTCTTTGTG	NA	False	NA	-6	True	NA	NA	NA	119089884	119083206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
Isoform_127139_12	chr4	-	5033	6	NNC	ENSMUSG00000078584.10	novel	657	6	NA	NA	-2	-2068	intron_retention	FALSE	non_canonical	3	18	junction_1	144.668448529733	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCAACCTTGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	119089884	119079106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_119079545_119079569_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
Isoform_127144_9	chr4	-	7122	6	NNC	ENSMUSG00000078584.10	novel	657	6	NA	NA	1	-3	intron_retention	FALSE	non_canonical	3	18	junction_1	144.668448529733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTGCTTGTTCCCCG	NA	False	NA	NA	False	NA	NA	NA	119089908	119077041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_119079545_119079569_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
Isoform_127145_5	chr4	-	719	5	FSM	ENSMUSG00000078584.10	ENSMUST00000144309.2	441	5	-2	-276	-2	186	multi-exon	FALSE	canonical	3	17	junction_4	161.922049147113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGTTTTGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	119089884	119083392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089832
Isoform_12715_286	chr11	-	1935	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	16	-5	16	3	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCATGGTCTTGTGTG	NA	False	NA	-4	True	AATATA	-24	NA	51526707	51514494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
Isoform_12716_71	chr11	-	1983	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	-34	-3	-34	1	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTGCATGGTCTTGTG	NA	False	NA	-6	True	AATATA	-22	NA	51526757	51514496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
Isoform_127174_16581	chr4	-	1524	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	104	0	0	0	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	16581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
Isoform_12718_15	chr11	-	2058	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	-105	-7	-105	5	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCATGGTCTTGTGTGTA	NA	False	NA	-2	True	AATATA	-26	NA	51526828	51514492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
Isoform_127191_484	chr4	-	1526	8	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	262	junction_2	3531.96674123986	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAATGTCTAGTTTTG	NA	False	NA	NA	False	AATAAA	-8	NA	119151695	119135185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_119135565_119136130_119136409_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
Isoform_127206_173	chr4	-	751	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	49	0	0	0	multi-exon	TRUE	canonical	2	32	junction_8	163.771144144263	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9631	False	NA	-3	True	AATAAA	-19	NA	119177694	119157206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
Isoform_127207_11	chr4	-	831	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	-31	0	-31	0	multi-exon	FALSE	canonical	2	32	junction_8	163.771144144263	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9551	False	NA	-3	True	AATAAA	-19	NA	119177774	119157206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
Isoform_127208_46	chr4	-	770	10	FSM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	-13	0	0	0	multi-exon	FALSE	canonical	2	32	junction_8	169.629516415942	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9631	False	NA	-3	True	AATAAA	-19	NA	119177694	119157206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
Isoform_127209_6	chr4	-	2170	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	-3	-879	-3	304	multi-exon	FALSE	canonical	2	32	junction_8	172.260640876149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCGGGATATGTAGCAGAG	9641	False	NA	NA	False	AATAAA	-18	NA	119177684	119163477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
Isoform_127211_8	chr4	-	2524	15	FSM	ENSMUSG00000028637.17	ENSMUST00000238759.2	3909	15	10	1375	3	1	multi-exon	FALSE	canonical	2	5	junction_1	6.79285338741071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTGATATACCTATT	9733	False	NA	NA	False	ATTAAA	-27	NA	119272708	119181037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119181391_119181737_119181806_119188319_119188435_119188678_119188816_119190776_119190919_119196957_119197071_119206926_119207072_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
Isoform_127212_22	chr4	-	1847	9	NIC	ENSMUSG00000028637.17	novel	1312	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	4.28478412525065	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGTGTTAGTAATTTC	9744	False	NA	NA	False	NA	NA	NA	119272697	119209442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_119209850_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
Isoform_127215_10	chr4	-	1545	2	FSM	ENSMUSG00000028636.15	ENSMUST00000140641.2	1543	2	0	-2	0	2	multi-exon	FALSE	canonical	3	317	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGTTTCTGGTTTTTTGT	5567	False	NA	-2	True	AATAAA	-32	NA	119279555	119275724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119276491_119278776
Isoform_127216_269	chr4	-	1383	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	58	2	-4	-2	multi-exon	FALSE	canonical	3	273	junction_2	22	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCGGGTTTCTGGTTTT	5563	False	NA	-6	True	AATAAA	-28	NA	119279559	119275728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119276491_119278776_119278881_119279042
Isoform_127217_196	chr4	-	1417	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	24	2	-20	-2	multi-exon	FALSE	canonical	3	273	junction_2	22	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCGGGTTTCTGGTTTT	5529	False	NA	-6	True	AATAAA	-28	NA	119279593	119275728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119276491_119278776_119278881_119279042
Isoform_127219_5	chr4	-	934	3	FSM	ENSMUSG00000028636.15	ENSMUST00000106316.2	954	3	18	2	0	-2	multi-exon	FALSE	canonical	3	24	junction_2	146.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCGGGTTTCTGGTTTT	5567	False	NA	-6	True	AATAAA	-28	NA	119279555	119275728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119276491_119278776_119278881_119279487
Isoform_127221_5	chr4	-	1595	3	NNC	ENSMUSG00000028636.15	novel	1443	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGTTTCTGGTTTTTT	5565	False	NA	-4	True	AATAAA	-30	NA	119279557	119275726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_119276491_119278564_119278881_119279042
Isoform_127222_83	chr4	-	4087	5	FSM	ENSMUSG00000048899.9	ENSMUST00000049994.8	4097	5	10	0	10	0	multi-exon	TRUE	canonical	3	32	junction_2	4.35889894354067	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTCCTATGTCTTGTCT	9983	False	NA	-4	True	AATATA	-24	NA	119349815	119322479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_119325723_119327663_119327868_119331715_119331803_119334987_119335219_119349493
Isoform_127224_156	chr4	-	3001	2	FSM	ENSMUSG00000052135.9	ENSMUST00000102656.4	2615	2	-388	2	-388	-2	multi-exon	FALSE	canonical	3	61	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCGAGCCTTGGGTTAG	NA	False	NA	-3	True	AATAAA	-14	NA	120144934	120124277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120126380_120144035
Isoform_127238_1944	chr4	-	2692	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	13	0	13	0	multi-exon	TRUE	canonical	3	663	junction_8	52.1791784782653	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427460	120397064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
Isoform_12724_9	chr11	-	2030	9	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	13	-1	intron_retention	FALSE	canonical	3	245	junction_3	13.7380630002923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGATTGCATGGTCTTG	NA	False	NA	-8	True	AATATA	-20	NA	51526710	51514498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
Isoform_127241_57	chr4	-	2123	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	-17	599	-17	-599	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTTGCAGTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	120427490	120397663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
Isoform_127242_71	chr4	-	3474	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	304	-2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_18	179.180610999139	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTGTGCTTTCTCTTG	NA	False	NA	-20	True	AATAAA	-12	NA	120427169	120397066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120426272
Isoform_127247_5	chr4	-	4128	14	FSM	ENSMUSG00000028631.8	ENSMUST00000030376.8	3919	14	-205	-4	-205	4	multi-exon	TRUE	canonical	0	0	junction_9	1.49159380228195	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTTGGTTGTGCTCGG	9226	False	NA	NA	False	ATTAAA	-19	NA	120604650	120553330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120555304_120555695_120555826_120557088_120557221_120559582_120559683_120561551_120561773_120568419_120568582_120570208_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748_120573925_120574121_120574249_120574654_120574746_120604056
Isoform_127250_908	chr4	-	1921	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	8	3	-2	-3	multi-exon	FALSE	canonical	3	393	junction_8	23.5424491839793	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATCTGTGTCTGGGAC	NA	False	NA	-4	True	AATAAA	-17	NA	120682895	120614637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
Isoform_127251_86	chr4	-	2017	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	-85	0	-84	0	multi-exon	FALSE	canonical	3	393	junction_8	23.5424491839793	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682988	120614634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
Isoform_127257_28	chr4	-	2072	10	NNC	ENSMUSG00000032897.18	novel	2006	10	NA	NA	481	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_9	131.604720542752	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682400	120614634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682083
Isoform_127259_22	chr4	-	1852	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	133.008399640775	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682895	120614634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120647573_120647687_120682726
Isoform_127261_13	chr4	-	1738	8	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	146.72367475869	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682895	120614634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120647573_120647687_120682726
Isoform_127263_8	chr4	-	1866	3	NIC	ENSMUSG00000028629.10	novel	1996	2	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	46.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTGACTTGATGTTT	NA	False	NA	-14	True	AATAAA	-17	NA	120782203	120778397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_120778610_120778735_120779894_120781707
Isoform_127264_15	chr4	-	1981	2	FSM	ENSMUSG00000028629.10	ENSMUST00000177880.2	1969	2	-8	-4	4	-2	multi-exon	FALSE	canonical	3	24	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGACTTGATGTTTGTG	NA	False	NA	-11	True	AATAAA	-20	NA	120782210	120778394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120779873_120781707
Isoform_127265_98	chr4	-	1992	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	-1	5	-1	1	multi-exon	FALSE	canonical	3	95	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTGACTTGATGTTT	NA	False	NA	-14	True	AATAAA	-17	NA	120782203	120778397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120779894_120781707
Isoform_12727_51	chr11	-	1927	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	86.7845352326989	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAATGATTGCATGGTCT	NA	False	NA	-10	True	AATATA	-18	NA	51526707	51514500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516660_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
Isoform_127270_13	chr4	-	2394	6	NIC	ENSMUSG00000064141.15	novel	2362	6	NA	NA	-36	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	13.3476589707709	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACTGATTTACAGATTA	6800	False	NA	NA	False	NA	NA	NA	120808932	120787334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_120788704_120791529_120791626_120792263_120792391_120804485_120804767_120806528_120806758_120808640
Isoform_127271_7	chr4	-	2417	6	FSM	ENSMUSG00000064141.15	ENSMUST00000106280.8	2362	6	-52	-3	-52	3	multi-exon	FALSE	canonical	3	8	junction_2	16.2898741554378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTTACAGATTAGTAT	6784	False	NA	NA	False	NA	NA	NA	120808948	120787330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120788704_120791529_120791629_120792263_120792391_120804485_120804767_120806528_120806758_120808640
Isoform_127272_9	chr4	-	2349	6	FSM	ENSMUSG00000064141.15	ENSMUST00000106280.8	2362	6	11	2	11	-2	multi-exon	FALSE	canonical	3	8	junction_2	16.2898741554378	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCACTGATTTACAGATT	6847	False	NA	NA	False	NA	NA	NA	120808885	120787335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120788704_120791529_120791629_120792263_120792391_120804485_120804767_120806528_120806758_120808640
Isoform_127277_400	chr4	-	2894	10	FSM	ENSMUSG00000032870.9	ENSMUST00000043200.8	2905	10	2	9	2	-9	multi-exon	TRUE	canonical	3	186	junction_3	19.2841007882109	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCTTTTTGCTCGGCT	NA	False	NA	-11	True	AATAAA	-12	NA	120874442	120825522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
Isoform_127280_14	chr4	-	1736	10	FSM	ENSMUSG00000032870.9	ENSMUST00000043200.8	2905	10	-37	1206	-37	-1206	multi-exon	FALSE	canonical	3	186	junction_3	19.2841007882109	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCACTCTTTTTGAC	NA	False	NA	-18	True	AATAAA	-16	NA	120874481	120826719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
Isoform_127288_236	chr4	-	3222	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	207	0	207	0	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	-1	True	ATTAAA	-20	NA	120955231	120916433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
Isoform_127289_138	chr4	-	3420	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	9	0	9	0	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	-1	True	ATTAAA	-20	NA	120955429	120916433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
Isoform_127307_173	chr4	-	6242	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	1	-1	1	1	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTACTCATAGAGTCTT	6465	False	NA	0	True	AATAAA	-19	NA	121072280	121003078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
Isoform_127314_35	chr4	-	3274	7	ISM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	1	6800	1	-6800	5prime_fragment	FALSE	canonical	3	168	junction_3	17.3557547292598	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6465	False	NA	NA	False	NA	NA	NA	121072280	121009879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
Isoform_127333_596	chr4	-	2558	13	FSM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	54	8	3	-8	multi-exon	FALSE	canonical	3	217	junction_12	208.332399997909	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779650	122752847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
Isoform_127337_403	chr4	-	2545	13	NIC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	229.274580652399	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779656	122752847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779625
Isoform_127338_50	chr4	-	2593	13	NIC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	229.274580652399	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779704	122752847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779625
Isoform_127342_1400	chr4	-	2561	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	199	8	3	-8	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779650	122752847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
Isoform_127343_96	chr4	-	2588	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	172	8	-20	-8	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779677	122752847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
Isoform_127344_55	chr4	-	2756	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	-2	14	-2	-14	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTTAGTTATTCACC	NA	False	NA	-21	True	AATAAA	-11	NA	122779851	122752853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
Isoform_127348_98	chr4	-	2737	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	-14	14	-2	-14	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTTAGTTATTCACC	NA	False	NA	-21	True	AATAAA	-11	NA	122779851	122752853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
Isoform_127349_588	chr4	-	2547	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	174	16	-6	-16	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTTGTTTAGTTATTCA	NA	False	NA	-23	True	AATAAA	-9	NA	122779663	122752855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
Isoform_127354_28	chr4	-	1247	10	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	113	junction_6	304.035816603534	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGCCTCCTGCAAGT	NA	False	NA	-16	True	AATAAA	-23	NA	123033734	123020909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123031318_123031363_123032658_123032758_123033694
Isoform_127357_1201	chr4	-	1178	10	FSM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	10	0	10	0	multi-exon	TRUE	canonical	3	832	junction_9	90.3078411481501	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033734	123020907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
Isoform_127358_113	chr4	-	1174	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_9	309.335169215497	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTGTTGCCTCCTGCA	NA	False	NA	-19	True	AATAAA	-20	NA	123033743	123020912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033702
Isoform_127359_35	chr4	-	2370	9	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	10	-2	intron_retention	FALSE	canonical	3	832	junction_8	93.9161860384034	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGCCTCCTGCAAGT	NA	False	NA	-16	True	AATAAA	-23	NA	123033734	123020909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123030692_123031318_123031363_123032658_123032758_123033694
Isoform_127360_26	chr4	-	2367	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	6	-1	intron_retention	FALSE	canonical	3	100	junction_8	324.369388198085	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033738	123020908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123030692_123031318_123031363_123032658_123032758_123033702
Isoform_127366_37	chr4	-	2058	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-148	7	-148	-7	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123236744	123206444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
Isoform_127368_21	chr4	-	2119	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-148	-54	-148	54	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAACATGTGTCCTGGGC	NA	False	NA	NA	False	AGTAAA	-16	NA	123236744	123206383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
Isoform_127369_8	chr4	-	5218	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-101	-3200	-101	3200	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTCTCTCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	123236697	123203237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
Isoform_127370_4	chr4	-	5326	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-148	-3261	-148	3261	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGCAGCAGTTTTGCCT	NA	False	NA	NA	False	ATTAAA	-24	NA	123236744	123203176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
Isoform_127371_5	chr4	-	2026	7	NNC	ENSMUSG00000032726.13	novel	1917	7	NA	NA	-148	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.28964257620968	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123236744	123206445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218472_123218891_123219082_123236176
Isoform_127372_3	chr4	-	2349	7	NNC	ENSMUSG00000032726.13	novel	1917	7	NA	NA	-21	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.28964257620968	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123237066	123206444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218472_123218891_123219082_123236176
Isoform_127390_7	chr4	-	3791	18	NIC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	-6077	-1	combination_of_known_junctions	FALSE	canonical	3	170	junction_15	32.9400209881379	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTAATTCTTGGCT	NA	False	NA	-9	True	ATTAAA	-17	NA	123272237	123243509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138
Isoform_127394_6	chr4	-	5197	27	NIC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	7127	-1	combination_of_known_junctions	FALSE	canonical	3	150	junction_26	40.5227126027662	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGTTTTGTAATTCTT	9693	False	NA	-13	True	ATTAAA	-13	NA	123277204	123243513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093
Isoform_127401_3	chr4	-	7082	37	NIC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	-6785	-2	combination_of_known_junctions	FALSE	canonical	2	84	junction_29	55.0378657531946	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAATGTTTTGTAATTCT	NA	False	NA	-14	True	ATTAAA	-12	NA	123291116	123243514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886
Isoform_127402_4	chr4	-	6954	37	NIC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	-6658	-3	combination_of_known_junctions	FALSE	canonical	2	84	junction_29	55.0378657531946	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAATGTTTTGTAATTC	NA	False	NA	-15	True	ATTAAA	-11	NA	123290989	123243515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886
Isoform_127403_3	chr4	-	7346	38	NIC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-7371	-1	combination_of_known_junctions	FALSE	canonical	2	84	junction_29	55.1925641554818	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTAATTCTTGGCT	NA	False	NA	-9	True	ATTAAA	-17	NA	123291702	123243509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540
Isoform_127404_3	chr4	-	7775	41	NIC	ENSMUSG00000028649.22	novel	23402	98	NA	NA	10382	0	combination_of_known_junctions	FALSE	canonical	2	82	junction_38	58.2573546859107	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTTTGTAATTCTTG	NA	False	NA	-12	True	ATTAAA	-14	NA	123295639	123243512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543
Isoform_127405_3	chr4	-	4340	32	ISM	ENSMUSG00000028649.22	ENSMUST00000147030.2	5706	39	-22	29980	-22	-15322	5prime_fragment	FALSE	canonical	2	9	junction_7	14.3626292741619	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAATAGTTGGGTCCCC	7063	False	NA	NA	False	AATATA	-36	NA	123558567	123380121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123558258
Isoform_127408_5	chr4	-	1836	3	ISM	ENSMUSG00000028649.22	ENSMUST00000147030.2	5706	39	-78	87074	-78	-4543	5prime_fragment	FALSE	canonical	3	50	junction_1	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAACCAAACAA	7007	False	NA	NA	False	NA	NA	NA	123558623	123437215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_123438625_123448096_123448159_123558258
Isoform_127409_21	chr4	-	546	3	FSM	ENSMUSG00000028648.14	ENSMUST00000106206.8	599	3	45	8	40	-8	multi-exon	FALSE	canonical	3	65	junction_2	1021.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTTAGTCTGTTTGCTT	1893	False	NA	-33	True	AATAAA	-9	NA	123611934	123606510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123606720_123609656_123609875_123611815
Isoform_127410_8	chr4	-	510	3	FSM	ENSMUSG00000028648.14	ENSMUST00000137312.2	350	3	-1	-159	-1	0	multi-exon	FALSE	canonical	3	29	junction_2	1039.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1852	False	NA	-25	True	AATAAA	-17	NA	123611975	123606502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123606720_123609656_123609875_123611900
Isoform_127411_15	chr4	-	526	3	FSM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	1318	junction_2	395	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1831	False	NA	-25	True	AATAAA	-17	NA	123611996	123606502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123606720_123609656_123609875_123611905
Isoform_127413_838	chr4	-	2213	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	41	798	41	-798	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCCTTCTTGATGCTGT	NA	False	NA	-12	True	AATAAA	-21	NA	123644097	123629149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
Isoform_127415_72	chr4	-	2345	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	73	634	-41	-634	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCATCGCTTCTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	123644065	123628985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
Isoform_127419_15	chr4	-	3013	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	41	-2	41	2	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCATTGGAATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	123644097	123628349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
Isoform_127427_929	chr4	-	994	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	6	603	6	34	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGATGTCTTTCTATGA	NA	False	NA	NA	False	NA	NA	NA	124587387	124572555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
Isoform_12743_974	chr11	-	2365	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-24	26	-24	-26	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTCTCTGGTCTTATG	NA	False	NA	-26	True	AATATA	-6	NA	51541693	51533915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
Isoform_127432_51	chr4	-	1594	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	5	4	5	-4	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAATCCTTGTGTGTG	NA	False	NA	NA	False	TATAAA	-12	NA	124587388	124571956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
Isoform_127433_23	chr4	-	2336	9	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	6	779	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	488.029968342109	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGATCTTCATCTTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	124587387	124571173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_124571878_124571917_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
Isoform_127439_4	chr4	-	812	3	FSM	ENSMUSG00000078570.11	ENSMUST00000106190.10	968	3	150	6	2	-1	multi-exon	FALSE	canonical	3	24	junction_2	88.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTGACTGACCTTTCT	7726	False	NA	-8	True	ATTAAA	-15	NA	124744452	124743283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124743756_124744024_124744227_124744314
Isoform_127440_28	chr4	-	753	3	FSM	ENSMUSG00000078570.11	ENSMUST00000125776.8	761	3	3	5	3	-1	multi-exon	FALSE	canonical	3	59	junction_2	71	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTGACTGACCTTTCT	7727	False	NA	-8	True	ATTAAA	-15	NA	124744451	124743283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124743756_124744024_124744227_124744372
Isoform_127441_42	chr4	-	1192	3	FSM	ENSMUSG00000078570.11	ENSMUST00000185036.2	1223	3	33	-2	33	-2	multi-exon	FALSE	canonical	3	65	junction_2	68	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGACTGACCTTTCTTTT	7222	False	NA	-5	True	ATTAAA	-18	NA	124744956	124743280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124743756_124744024_124744227_124744441
Isoform_127443_3	chr4	-	1652	3	FSM	ENSMUSG00000078570.11	ENSMUST00000185036.2	1223	3	16	-445	16	35	multi-exon	FALSE	canonical	3	65	junction_2	68	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAAGACCACTGGCCAA	7205	False	NA	NA	False	AATAAA	-24	NA	124744973	124742837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124743756_124744024_124744227_124744441
Isoform_127444_4	chr4	-	2560	5	NNC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	37.589892258425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124756021	124749031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425_124755769_124755992
Isoform_127445_7	chr4	-	3015	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	-119	-169	-119	169	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAGTCAAGATTTTA	NA	False	NA	NA	False	AATAAA	-42	NA	124756083	124748862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
Isoform_127446_91	chr4	-	2793	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	-66	0	-66	0	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124756030	124749031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
Isoform_127447_17	chr4	-	2846	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	-119	0	-119	0	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124756083	124749031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
Isoform_127448_37	chr4	-	2970	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	-72	-171	-72	171	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTCAAGATTTTATT	NA	False	NA	NA	False	AATAAA	-44	NA	124756036	124748860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
Isoform_12745_401	chr11	-	2539	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-198	26	-198	-26	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTCTCTGGTCTTATG	NA	False	NA	-26	True	AATATA	-6	NA	51541867	51533915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
Isoform_127450_2045	chr4	-	1606	10	FSM	ENSMUSG00000028873.17	ENSMUST00000084296.10	1626	10	16	4	16	-4	multi-exon	FALSE	canonical	3	1430	junction_6	123.940846105444	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTCCTCGGTCATCTG	NA	False	NA	-14	True	AATAAA	-22	NA	124830694	124812261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
Isoform_127455_40	chr4	-	2427	9	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	11	-14	intron_retention	FALSE	canonical	3	1430	junction_5	130.887117395105	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTAAGTCAGTCCT	NA	False	NA	-24	True	AATAAA	-12	NA	124830699	124812271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_124812824_124813405_124813493_124814051_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
Isoform_127466_38	chr4	-	2780	6	FSM	ENSMUSG00000042677.8	ENSMUST00000036188.8	2755	6	-46	21	-46	-21	multi-exon	FALSE	canonical	2	13	junction_5	0.748331477354788	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAATTTAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125021679	125012236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_125013938_125014118_125014226_125014664_125014900_125016046_125016187_125020398_125020876_125021559
Isoform_127469_14	chr4	-	2370	16	FSM	ENSMUSG00000073758.11	ENSMUST00000097891.4	2384	16	13	1	13	-1	multi-exon	FALSE	canonical	2	5	junction_2	4.1505019776729	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCAGTCTGGTCCTTGTG	1151	False	NA	-1	True	AGTAAA	-20	NA	126057271	126044395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126044590_126044669_126044728_126044809_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126054260_126054304_126055127_126055215_126055315_126055417_126055527_126055574_126055760_126055817_126055968_126056060_126056245_126056365_126056594_126056659_126056758_126056917_126057017
Isoform_127470_5	chr4	-	1885	12	FSM	ENSMUSG00000073758.11	ENSMUST00000094760.9	1859	12	-41	15	-2	-9	multi-exon	FALSE	canonical	2	5	junction_2	4.41260403618604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGAACACTCAGGCCA	1962	False	NA	-15	True	AGTAAA	-6	NA	126056460	126044409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126044590_126044669_126044728_126044809_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126054260_126054304_126055127_126055215_126055315_126055417_126055527_126055574_126055760_126055817_126056245
Isoform_12748_141	chr11	-	2617	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-276	26	-276	-26	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTCTCTGGTCTTATG	NA	False	NA	-26	True	AATATA	-6	NA	51541945	51533915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
Isoform_12751_27	chr11	-	2818	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-459	8	-459	-8	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGAAAATGGAGGAA	NA	False	NA	-8	True	AATATA	-24	NA	51542128	51533897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
Isoform_127515_989	chr4	-	4350	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGACTGTGTTTGTTGCT	6788	False	NA	-5	True	AATAAA	-26	NA	126096439	126057876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
Isoform_127520_581	chr4	-	4262	11	FSM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	114	2	1	-2	multi-exon	FALSE	canonical	3	431	junction_10	137.634443363571	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGACTGTGTTTGTTGCT	6788	False	NA	-5	True	AATAAA	-26	NA	126096439	126057876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
Isoform_127531_55	chr4	-	3838	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	68	junction_7	237.221554913761	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGACTGTGTTTGTTGCT	6787	False	NA	-5	True	AATAAA	-26	NA	126096440	126057876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
Isoform_127538_58	chr4	-	3645	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	255.6	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6796	False	NA	-6	True	AATAAA	-25	NA	126096431	126057877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126073704_126074608_126080227_126080382_126088109_126088198_126096362
Isoform_127573_87	chr4	-	3271	18	FSM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	-24	2	-18	-2	multi-exon	FALSE	canonical	3	86	junction_13	57.8802606030247	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150094	126125961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127575_45	chr4	-	3264	18	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-20	-2	combination_of_known_splicesites	FALSE	canonical	3	52	junction_13	63.2753635019	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150096	126125961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127577_122	chr4	-	3160	17	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	51.2541156884011	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150094	126125961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127578_43	chr4	-	3194	17	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	51.2541156884011	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150128	126125961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127579_58	chr4	-	3151	17	FSM	ENSMUSG00000028849.18	ENSMUST00000106132.3	3195	17	42	2	-18	-2	multi-exon	FALSE	canonical	3	46	junction_12	60.9301598143317	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150094	126125961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127580_62	chr4	-	3369	17	FSM	ENSMUSG00000028849.18	ENSMUST00000061143.15	3351	17	-20	2	-20	-2	multi-exon	FALSE	canonical	3	86	junction_12	56.4079726191254	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150096	126125961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127582_42	chr4	-	3359	17	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	52	junction_12	62.4189474438652	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150095	126125961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127583_21	chr4	-	3312	16	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	98	junction_11	48.1315789153949	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150150	126125961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127584_146	chr4	-	3255	16	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	98	junction_11	48.1315789153949	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150094	126125962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127585_63	chr4	-	3247	16	NIC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	46	junction_11	59.2617545770926	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150094	126125961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_127589_781	chr4	-	1646	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	26	0	26	0	multi-exon	FALSE	canonical	3	286	junction_3	41.9218320210365	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	7102	False	NA	NA	False	AATAAA	-20	NA	126215470	126209839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
Isoform_127590_19	chr4	-	1739	5	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	12	0	intron_retention	FALSE	canonical	3	306	junction_2	36.0416425818802	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	7088	False	NA	NA	False	AATAAA	-20	NA	126215484	126209839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126210659_126211095_126211197_126211512_126211985_126212191_126212289_126215234
Isoform_127591_20	chr4	-	1969	5	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	12	-2	intron_retention	FALSE	canonical	3	286	junction_2	42.9418211071678	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCAGCATGTCCTGTTC	7088	False	NA	NA	False	AATAAA	-13	NA	126215484	126209846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126210659_126211095_126211698_126211776_126211985_126212191_126212289_126215234
Isoform_127592_94	chr4	-	2056	4	FSM	ENSMUSG00000042558.17	ENSMUST00000128188.8	1826	4	-225	-5	11	0	multi-exon	FALSE	canonical	3	330	junction_1	27.3901847788988	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	7087	False	NA	NA	False	AATAAA	-20	NA	126215485	126209839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126210659_126211095_126211985_126212191_126212289_126215234
Isoform_127594_10	chr4	-	2493	3	NIC	ENSMUSG00000042558.17	novel	1826	4	NA	NA	10	-1	intron_retention	FALSE	canonical	3	386	junction_2	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTCCTGTTCCTGTCT	7086	False	NA	NA	False	AATAAA	-19	NA	126215486	126209840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126211985_126212191_126212289_126215234
Isoform_127596_5	chr4	-	1491	9	ISM	ENSMUSG00000028845.16	ENSMUST00000030658.13	1492	10	125	1	125	-1	3prime_fragment	FALSE	canonical	2	5	junction_7	3.35410196624968	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCAGGCTCTTTTCTGC	3705	False	NA	NA	False	AATAAA	-12	NA	126218867	126215916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_126216213_126216364_126216445_126216612_126216757_126216912_126217021_126217149_126217265_126217431_126217576_126218022_126218229_126218386_126218513_126218595
Isoform_127597_4	chr4	-	1603	11	NIC	ENSMUSG00000028845.16	novel	1542	11	NA	NA	30	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	3.61247837363769	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCAGGCTCTTTTCTG	3374	False	NA	NA	False	AATAAA	-11	NA	126219198	126215917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126216213_126216364_126216445_126216612_126216757_126216912_126217021_126217149_126217265_126217431_126217576_126218022_126218229_126218386_126218513_126218595_126218802_126218926_126218997_126219089
Isoform_127599_3	chr4	-	7147	19	FSM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	1	8447	1	4398	multi-exon	FALSE	canonical	2	3	junction_6	10.4927958825138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGTGAGGTCTTCCT	2365	False	NA	NA	False	AATAAA	-17	NA	126323348	126234971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
Isoform_12760_299	chr11	-	796	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	23	-6	23	6	multi-exon	FALSE	canonical	3	574	junction_1	0	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGAATGCTTTTCCT	5207	False	NA	-6	True	ATTAAA	-20	NA	51579457	51576206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51576920_51579374
Isoform_127600_3	chr4	-	2959	18	ISM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	8	13676	-7	-831	5prime_fragment	FALSE	canonical	2	3	junction_5	10.554849325815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAACAGAGTGTGATTTC	2372	False	NA	NA	False	AATAAA	-37	NA	126323341	126240200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
Isoform_127601_4	chr4	-	1319	7	NIC	ENSMUSG00000028842.16	novel	625	4	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	7.32006375199925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTCCTTTCATAAT	2372	False	NA	NA	False	ATTAAA	-19	NA	126323341	126269469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126269734_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
Isoform_127602_3	chr4	-	7290	19	FSM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	-67	4	-67	-4	multi-exon	FALSE	canonical	2	5	junction_8	3.48364786813131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGCAGTCTGTTTTTT	NA	False	NA	-24	True	TATAAA	-22	NA	126362443	126328808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
Isoform_127603_3	chr4	-	3136	19	FSM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	-90	4181	-90	310	multi-exon	FALSE	canonical	2	5	junction_8	3.48364786813131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAAAGACTCATGCTCAA	NA	False	NA	NA	False	NA	NA	NA	126362466	126332985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
Isoform_127604_3	chr4	-	7249	19	FSM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	-26	4	-26	-4	multi-exon	FALSE	canonical	2	5	junction_8	3.48364786813131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGCAGTCTGTTTTTT	NA	False	NA	-24	True	TATAAA	-22	NA	126362402	126328808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
Isoform_12761_13	chr11	-	849	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	-30	-6	-30	6	multi-exon	FALSE	canonical	3	574	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGAATGCTTTTCCT	5154	False	NA	-6	True	ATTAAA	-20	NA	51579510	51576206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51576920_51579374
Isoform_127611_16	chr4	-	4556	6	ISM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	3	11	3	-11	intron_retention	FALSE	canonical	3	191	junction_5	19.3225257148231	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAAGCCTCCTTTGTGGT	NA	False	NA	-12	True	NA	NA	NA	126647199	126637553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733
Isoform_127612_335	chr4	-	3667	7	FSM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	3	11	3	-11	multi-exon	FALSE	canonical	3	145	junction_6	31.1216252074913	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAAGCCTCCTTTGTGGT	NA	False	NA	-12	True	NA	NA	NA	126647199	126637553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763
Isoform_127613_8	chr4	-	4027	7	FSM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	-353	7	-324	-7	multi-exon	FALSE	canonical	3	145	junction_6	31.1216252074913	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTTGTGGTCTGC	NA	False	NA	-8	True	NA	NA	NA	126647555	126637549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763
Isoform_127614_60	chr4	-	3327	7	FSM	ENSMUSG00000028833.14	ENSMUST00000127079.2	2375	7	20	-972	-9	-9	multi-exon	FALSE	canonical	3	56	junction_6	61.3969326052477	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCCTCCTTTGTGGTCT	NA	False	NA	-10	True	NA	NA	NA	126647211	126637551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126647117
Isoform_127616_5	chr4	-	3196	6	NIC	ENSMUSG00000028833.14	novel	2375	7	NA	NA	-1	-9	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	87.2068804624956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCCTCCTTTGTGGTCT	NA	False	NA	-10	True	NA	NA	NA	126647221	126637551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126647117
Isoform_127621_39	chr4	-	7193	30	FSM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-91	0	-91	0	multi-exon	FALSE	canonical	3	101	junction_15	43.6375461501576	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126862019	126755731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
Isoform_127633_4	chr4	-	6784	28	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	48	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	65.0008124883271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGTGAGTTCTTTTTC	NA	False	NA	-13	True	AATAAA	-17	NA	126861880	126755734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
Isoform_127635_51	chr4	-	6707	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-82	-474	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_15	36.0808643919119	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCATCCTGCTGTATCA	NA	False	NA	-6	True	AATAAA	-16	NA	126862010	126756205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
Isoform_127642_49	chr4	-	7155	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_15	36.0808643919119	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126861984	126755731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
Isoform_127648_4	chr4	-	1677	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-89	53007	-89	2	5prime_fragment	FALSE	canonical	3	222	junction_3	34.4141443789226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATTTA	NA	False	NA	NA	False	NA	NA	NA	126862017	126808738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
Isoform_12765_11	chr11	-	6409	23	FSM	ENSMUSG00000036391.17	ENSMUST00000038210.12	3800	23	-242	-2367	-15	-4	multi-exon	FALSE	canonical	3	22	junction_16	14.7653827896746	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTATGAAAATGTTAGTTA	3758	False	NA	-23	True	AATAAA	-14	NA	51647280	51583094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620403_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
Isoform_127658_22	chr4	-	3065	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106099.8	2982	8	-27	-56	1	7	multi-exon	FALSE	canonical	3	10	junction_1	144.172515708488	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAAGTTTTGTTTGTTG	NA	False	NA	NA	False	ATTAAA	-27	NA	126954944	126941378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126943406_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
Isoform_127662_42	chr4	-	3541	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-13	10	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	172.979586945975	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTTTGTTTGTTGGAG	NA	False	NA	NA	False	ATTAAA	-30	NA	126954930	126941375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951193_126951387_126952585_126952825_126953302_126953453_126954788
Isoform_127665_23	chr4	-	3380	8	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	2	13	junction_7	138.51633661848	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126954885	126941383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954703
Isoform_127666_897	chr4	-	3295	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	60	497	-6	2	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126954885	126941383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
Isoform_127673_43	chr4	-	3192	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-13	4	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	141.739981029427	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATGAAGTTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	126954930	126941381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126954788
Isoform_12768_68	chr11	-	6418	23	FSM	ENSMUSG00000036391.17	ENSMUST00000109097.9	6581	23	164	-1	-16	1	multi-exon	FALSE	canonical	3	47	junction_21	10.4921261307612	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGTTAGTTATTGAA	3757	False	NA	-18	True	AATAAA	-19	NA	51647281	51583089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
Isoform_127684_11	chr4	-	1717	2	FSM	ENSMUSG00000050234.8	ENSMUST00000053753.8	1685	2	-35	3	-35	-3	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCAGGTGTGCACTGAT	NA	False	NA	-3	True	AATAAA	-14	NA	127207867	127205216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_127206779_127207712
Isoform_127685_1517	chr4	-	1593	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	29	1	29	-1	multi-exon	FALSE	canonical	3	984	junction_1	0	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127222925	127219028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_127220565_127222868
Isoform_127686_331	chr4	-	1682	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	-60	1	-60	-1	multi-exon	FALSE	canonical	3	984	junction_1	0	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127223014	127219028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_127220565_127222868
Isoform_127687_1187	chr4	-	1848	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	31	1	31	-1	multi-exon	FALSE	canonical	3	980	junction_1	0	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127224606	127219028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_127220565_127224294
Isoform_127688_1877	chr4	-	1654	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	225	1	225	-1	multi-exon	FALSE	canonical	3	980	junction_1	0	1877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127224412	127219028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_127220565_127224294
Isoform_12769_8	chr11	-	2115	11	FSM	ENSMUSG00000036391.17	ENSMUST00000064297.5	2104	11	-10	-1	-10	1	multi-exon	FALSE	canonical	3	47	junction_9	12.9015502944414	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGTTTTTTTCAGA	3763	False	NA	NA	False	AATAAA	-15	NA	51647275	51612515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
Isoform_127698_55	chr4	-	1443	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	2	0	2	0	multi-exon	FALSE	canonical	3	55	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAGTCAGGCGGAGAA	4506	False	NA	-10	True	AATAAA	-17	NA	127247872	127244878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_127246275_127247825
Isoform_127699_31	chr4	-	2744	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	2	-1301	2	1301	multi-exon	FALSE	canonical	3	55	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTGTGAGCCTCGT	4506	False	NA	NA	False	NA	NA	NA	127247872	127243577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_127246275_127247825
Isoform_127700_713	chr4	-	1318	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	18	385	18	-385	multi-exon	FALSE	canonical	3	573	junction_1	0	713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTCCTTTGGGTCTTGG	422	False	NA	-5	True	AATAAA	-23	NA	127251956	127248986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_127250167_127251818
Isoform_127704_14	chr4	-	5305	8	FSM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	59	0	3	0	multi-exon	FALSE	canonical	3	8	junction_1	4.69041575982343	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAACATTTTGTATTT	NA	False	NA	-6	True	NA	NA	NA	128503832	128477339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
Isoform_127707_5	chr4	-	3467	8	NNC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	2	0	intron_retention	FALSE	canonical	2	4	junction_2	6.72794962246664	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTCTTTACAAATGCTG	NA	False	NA	NA	False	AATACA	-16	NA	128503825	128479167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_128480638_128481808_128482235_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
Isoform_127708_3	chr4	-	5297	8	NNC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_2	6.72794962246664	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAACATTTTGTATTT	NA	False	NA	-6	True	NA	NA	NA	128503827	128477339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_128480638_128481808_128482235_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
Isoform_12771_5	chr11	-	2233	2	ISM	ENSMUSG00000036391.17	ENSMUST00000154325.2	4273	3	7180	1584	-16	-1584	3prime_fragment	FALSE	canonical	3	83	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAAACCTAAA	3757	False	NA	NA	False	NA	NA	NA	51647281	51632972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_51634828_51646903
Isoform_127710_5	chr4	-	3083	9	FSM	ENSMUSG00000028799.16	ENSMUST00000106072.9	2812	9	-269	-2	-269	2	multi-exon	FALSE	canonical	3	13	junction_4	3.19912097301743	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCTTTTCAGTCTGCA	NA	False	NA	NA	False	ATTAAA	-16	NA	128700107	128666878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128688643_128688770_128699804
Isoform_127711_23	chr4	-	2070	11	FSM	ENSMUSG00000028789.17	ENSMUST00000030581.10	2063	11	-1	-6	-1	6	multi-exon	FALSE	canonical	0	0	junction_10	8.67698104181403	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCCTTCAGTGGAATCA	NA	False	NA	NA	False	AATAAA	-24	NA	128856233	128825808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
Isoform_127712_4	chr4	-	2841	11	FSM	ENSMUSG00000028789.17	ENSMUST00000030581.10	2063	11	0	-778	0	778	multi-exon	FALSE	canonical	0	0	junction_10	8.67698104181403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAAACTGTTATTATTT	NA	False	NA	NA	False	CATAAA	-16	NA	128856232	128825036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
Isoform_127713_7	chr4	-	1892	10	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	8.90831211236775	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCCTTCAGTGGAATCA	NA	False	NA	NA	False	AATAAA	-24	NA	128856229	128825808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855155_128855353_128855876_128855998_128856093
Isoform_127714_6	chr4	-	1699	9	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	8.93028554974588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTCAGTGGAATCAT	NA	False	NA	NA	False	AATAAA	-25	NA	128856232	128825807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855876_128855998_128856093
Isoform_127715_4	chr4	-	1007	2	FSM	ENSMUSG00000085085.3	ENSMUST00000149472.3	1009	2	20	-18	20	18	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTGGCTCTTTTTGCT	NA	False	NA	0	True	AATAAA	-34	NA	128951756	128943871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_128944703_128951580
Isoform_127717_11	chr4	-	4104	9	FSM	ENSMUSG00000040928.16	ENSMUST00000072431.13	4059	9	-43	-2	4	2	multi-exon	FALSE	canonical	3	18	junction_6	67.6456761367643	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1108	False	NA	-3	True	AATAAA	-17	NA	129083415	129041795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129077393_129077511_129083334
Isoform_127718_19	chr4	-	3982	9	FSM	ENSMUSG00000040928.16	ENSMUST00000106059.8	4084	9	105	-3	4	3	multi-exon	FALSE	canonical	3	25	junction_6	66.0793793478722	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1108	False	NA	-2	True	AATAAA	-18	NA	129083415	129041794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083334
Isoform_127720_5	chr4	-	4234	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	24	2	intron_retention	FALSE	canonical	3	32	junction_7	68.3591953714841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1256	False	NA	-3	True	AATAAA	-17	NA	129083267	129041795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083164
Isoform_127722_19	chr4	-	4238	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	20	0	intron_retention	FALSE	canonical	3	49	junction_5	52.6272995037863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1080	False	NA	-5	True	AATAAA	-15	NA	129083443	129041797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083334
Isoform_127723_7	chr4	-	4049	7	FSM	ENSMUSG00000040928.16	ENSMUST00000117497.8	1053	7	31	-3027	-1	0	multi-exon	FALSE	canonical	3	49	junction_5	68.8226383943216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1152	False	NA	-5	True	AATAAA	-15	NA	129083371	129041797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129083334
Isoform_127725_16	chr4	-	4427	7	FSM	ENSMUSG00000040928.16	ENSMUST00000106061.9	4426	7	1	-2	1	2	multi-exon	FALSE	canonical	3	32	junction_6	60.2301142840246	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1189	False	NA	-3	True	AATAAA	-17	NA	129083334	129041795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083164
Isoform_127726_34	chr4	-	4360	7	FSM	ENSMUSG00000040928.16	ENSMUST00000106061.9	4426	7	69	-3	25	3	multi-exon	FALSE	canonical	3	32	junction_6	60.2301142840246	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1257	False	NA	-2	True	AATAAA	-18	NA	129083266	129041794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083164
Isoform_127727_116	chr4	-	4339	7	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	4	3	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1108	False	NA	-2	True	AATAAA	-18	NA	129083415	129041794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
Isoform_127728_31	chr4	-	4368	7	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	19	3	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1079	False	NA	-2	True	AATAAA	-18	NA	129083444	129041794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
Isoform_127729_6	chr4	-	4262	6	NIC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	3	0	intron_retention	FALSE	canonical	2	7	junction_5	75.8762149820351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1235	False	NA	-5	True	AATAAA	-15	NA	129083288	129041797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129083164
Isoform_12773_4	chr11	-	6248	12	FSM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	29	-4	29	4	multi-exon	FALSE	canonical	2	9	junction_11	3.21926021993196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGACGTTCTGTTGTG	8377	False	NA	-7	True	AATAAA	-21	NA	51748451	51704277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748137
Isoform_127730_80	chr4	-	4188	6	NIC	ENSMUSG00000040928.16	novel	1053	7	NA	NA	-9	3	intron_retention	FALSE	canonical	3	52	junction_5	57.9931030382062	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1142	False	NA	-2	True	AATAAA	-18	NA	129083381	129041794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129083334
Isoform_12774_4	chr11	-	2728	12	FSM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	239	3306	-18	-3301	multi-exon	FALSE	canonical	2	9	junction_11	3.21926021993196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTGTCTTTCCTCTGT	8587	False	NA	0	True	AATATA	-20	NA	51748241	51707587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748137
Isoform_12776_39	chr11	-	1713	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	21	58	16	-58	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTCTCTCTAGTAGT	NA	False	NA	0	True	AGTAAA	-16	NA	51891290	51876381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
Isoform_127760_14	chr4	-	4999	7	FSM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	50	0	50	0	multi-exon	FALSE	canonical	3	23	junction_6	86.8210164009204	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	0	True	NA	0	True	ATTAAA	-28	NA	129121654	129113370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129121519
Isoform_127761_171	chr4	-	5075	7	FSM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	-49	7	-49	-7	multi-exon	FALSE	canonical	3	123	junction_6	50.045534821356	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTGTGACTGCTG	NA	False	NA	-7	True	ATTAAA	-21	NA	129133016	129113377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
Isoform_127766_208	chr4	-	5226	7	FSM	ENSMUSG00000050390.13	ENSMUST00000052602.6	5187	7	-46	7	-46	-7	multi-exon	FALSE	canonical	3	145	junction_6	42.0713679359253	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTGTGACTGCTG	NA	False	NA	-7	True	ATTAAA	-21	NA	129142282	129113377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
Isoform_127772_54	chr4	-	1687	12	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	30	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	305.162062349697	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGGGTTTTATTTAG	2522	False	NA	-21	True	AATAAA	-22	NA	129229133	129203301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129203670_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_127774_14	chr4	-	1230	7	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	30	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	393.876743269882	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGCTGGTGGGTTTT	2522	False	NA	-27	True	AATAAA	-16	NA	129229133	129203307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129203670_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_127776_195	chr4	-	847	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	30	2	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGCTGGTGGGTTTT	2522	False	NA	-27	True	AATAAA	-16	NA	129229133	129203307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_127785_58	chr4	-	1983	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	15	2409	15	8	multi-exon	FALSE	canonical	3	482	junction_1	226.647613038099	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGGGTTTTATTTAG	2507	False	NA	-21	True	AATAAA	-22	NA	129229148	129203301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_127786_615	chr4	-	1960	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	38	2409	38	8	multi-exon	FALSE	canonical	3	482	junction_1	226.647613038099	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGGGTTTTATTTAG	2530	False	NA	-21	True	AATAAA	-22	NA	129229125	129203301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_127787_21	chr4	-	2080	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	40	2287	40	130	multi-exon	TRUE	canonical	3	482	junction_1	226.647613038099	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCATAGATAAAAGAGAG	2532	False	NA	NA	False	AATAAA	-14	NA	129229123	129203179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_127796_295	chr4	-	2065	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	250	6	250	-6	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATCTTTTTCGTGACA	NA	False	NA	-6	True	AATAAA	-18	NA	129271659	129247426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
Isoform_127797_255	chr4	-	2094	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	226	1	226	-1	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTCGTGACACTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	129271683	129247421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
Isoform_127798_38	chr4	-	2333	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	-14	2	-14	-2	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTTCGTGACACTTT	NA	False	NA	-2	True	AATAAA	-22	NA	129271923	129247422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
Isoform_127799_32	chr4	-	2364	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	-44	1	-44	-1	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTCGTGACACTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	129271953	129247421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
Isoform_127801_11	chr4	-	2028	5	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	3227	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	62.8191849676514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATCTTTTTCGTGACA	117	False	NA	-6	True	AATAAA	-18	NA	129268682	129247426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129268592
Isoform_127803_8	chr4	-	2016	5	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	3799	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	63.2509881345738	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTCGTGACACTTTT	689	False	NA	-1	True	AATAAA	-23	NA	129268110	129247421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129268037
Isoform_127805_25	chr4	-	2778	4	FSM	ENSMUSG00000048485.13	ENSMUST00000053042.6	3288	4	5	505	5	-1	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTGCTTGTATTTT	744	False	NA	-1	True	ATTAAA	-14	NA	129334606	129320062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129321621_129322220_129322400_129326103_129327105_129334566
Isoform_12781_114	chr11	-	907	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	123	762	118	408	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTTTGTCACTTATTT	NA	False	NA	-2	True	AATACA	-14	NA	51891188	51877085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
Isoform_127817_3169	chr4	-	1984	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	53	1	31	-1	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	3169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCCTGGTTGGTTTAAGT	8861	False	NA	-6	True	AATAAA	-21	NA	129436453	129409897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
Isoform_127818_1382	chr4	-	2016	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	22	0	0	0	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	8830	False	NA	-5	True	AATAAA	-22	NA	129436484	129409896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
Isoform_12783_8	chr11	-	2102	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	39	-349	34	349	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGGTGGCACATAACC	NA	False	NA	NA	False	NA	NA	NA	51891272	51875974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
Isoform_127831_6	chr4	-	1185	7	NNC	ENSMUSG00000000409.15	novel	2185	12	NA	NA	-128	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	62.3077041785364	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTTCTACTGCATAC	NA	False	NA	-2	True	NA	NA	NA	129449769	129442143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445766_129449380_129449512_129449645_129449722_129449752
Isoform_127834_84	chr4	-	1590	7	ISM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	1842	6	-71	-1	3prime_fragment	FALSE	canonical	3	108	junction_2	13.2214052035158	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTCTACTGCATACT	NA	False	NA	-1	True	NA	NA	NA	129450323	129442142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080
Isoform_127836_27	chr4	-	2186	12	FSM	ENSMUSG00000000409.15	ENSMUST00000067240.11	2185	12	-2	1	-2	-1	multi-exon	TRUE	canonical	3	10	junction_9	59.1335510476424	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTCTACTGCATACT	NA	False	NA	-1	True	NA	NA	NA	129452186	129442142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873
Isoform_127837_8	chr4	-	2058	13	FSM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	2	14	2	-9	multi-exon	FALSE	canonical	3	4	junction_12	60.4484973620795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTGTACATTTTTCTAC	NA	False	NA	-9	True	NA	NA	NA	129452163	129442150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873_129451984_129452080
Isoform_127838_3	chr4	-	1466	7	NNC	ENSMUSG00000000409.15	novel	2185	12	NA	NA	-65	-8	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	49.1813537385416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGTACATTTTTCTACT	NA	False	NA	-8	True	NA	NA	NA	129450089	129442149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129449963
Isoform_12784_79	chr11	-	1002	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	28	762	23	408	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTTTGTCACTTATTT	NA	False	NA	-2	True	AATACA	-14	NA	51891283	51877085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
Isoform_127849_57	chr4	-	1143	10	ISM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	51	21	2	-21	intron_retention	FALSE	canonical	3	1341	junction_3	45.5241083871441	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTTCCTTGTCAGG	6428	False	NA	-21	True	AATAAA	-11	NA	129494390	129485773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201
Isoform_12785_55	chr11	-	1611	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	123	58	118	-58	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTCTCTCTAGTAGT	NA	False	NA	0	True	AGTAAA	-16	NA	51891188	51876381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
Isoform_127850_1600	chr4	-	1075	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	28	20	-4	-20	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTCCTTGTCAGGC	6405	False	NA	-20	True	AATAAA	-12	NA	129494413	129485772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
Isoform_127851_186	chr4	-	1103	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	0	20	0	-20	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTCCTTGTCAGGC	6377	False	NA	-20	True	AATAAA	-12	NA	129494441	129485772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
Isoform_127854_23	chr4	-	1255	6	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-4	137	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	35.7960891718635	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTCACGCCTTTAAT	NA	False	NA	-23	True	NA	NA	NA	129512877	129509414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_129509881_129510753_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
Isoform_127857_101	chr4	-	2097	6	NNC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-4	137	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.0505631702531	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTCACGCCTTTAAT	NA	False	NA	-23	True	NA	NA	NA	129512877	129509414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_129510010_129510040_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
Isoform_127858_56	chr4	-	2589	6	NNC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.0505631702531	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATATATGTACAAATATA	NA	False	NA	NA	False	NA	NA	NA	129512877	129508922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_129510010_129510040_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
Isoform_127859_6	chr4	-	2662	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	15	-38	-4	38	multi-exon	TRUE	canonical	3	109	junction_1	14.396180048888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATGTATATAAGTATT	NA	False	NA	NA	False	NA	NA	NA	129512877	129508880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
Isoform_127860_6	chr4	-	1645	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	14	980	-5	-347	multi-exon	FALSE	canonical	3	109	junction_1	14.396180048888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGCTGCCATGCAGGA	NA	False	NA	NA	False	AATAAA	-14	NA	129512878	129509898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
Isoform_127863_17	chr4	-	479	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	12	0	-4	0	multi-exon	FALSE	canonical	3	28	junction_1	58	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGACTTGTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	129512877	129511891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129512156_129512284_129512429_129512806
Isoform_127864_53	chr4	-	827	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	52	0	4	0	multi-exon	FALSE	canonical	3	76	junction_3	6.82934843158555	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCGGTGCTCTCCTTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	129517688	129513066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
Isoform_127876_12	chr4	-	3491	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	99	1257	-66	-1257	multi-exon	FALSE	canonical	3	289	junction_1	24.9225962224873	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTCGTGCTGATGAT	8219	False	NA	NA	False	AGTAAA	-12	NA	129534499	129521132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
Isoform_127878_20	chr4	-	4698	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	153	-4	-12	-1	multi-exon	FALSE	canonical	3	289	junction_1	24.9225962224873	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCAGCCAATCGAATTA	8273	False	NA	-6	True	ATTAAA	-21	NA	129534445	129519871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
Isoform_127880_12	chr4	-	4813	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	40	-6	40	1	multi-exon	FALSE	canonical	3	289	junction_1	24.9225962224873	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGCCAATCGAATTATT	8160	False	NA	-4	True	ATTAAA	-23	NA	129534558	129519869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
Isoform_127881_15	chr4	-	4730	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	123	-6	-42	1	multi-exon	FALSE	canonical	3	289	junction_1	24.9225962224873	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGCCAATCGAATTATT	8243	False	NA	-4	True	ATTAAA	-23	NA	129534475	129519869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
Isoform_127894_297	chr4	-	4524	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	44	1	-43	-1	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCAGCCAATCGAATTA	7904	False	NA	-6	True	ATTAAA	-21	NA	129534814	129519871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
Isoform_12791_11	chr11	-	994	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	-1	-408	-1	408	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTTTGTCACTTATTT	NA	False	NA	-2	True	AATACA	-14	NA	51891590	51877085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
Isoform_127918_120	chr4	-	2192	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	18	3500	18	4	multi-exon	FALSE	canonical	3	106	junction_4	15.2943505832485	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTATGCTTGGAT	8852	False	NA	-25	True	NA	NA	NA	129566542	129541272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
Isoform_127919_109	chr4	-	5704	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	1	5	1	-5	multi-exon	FALSE	canonical	3	106	junction_4	15.2943505832485	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGTT	8835	False	NA	-2	True	AATAAA	-17	NA	129566559	129537777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
Isoform_127920_109	chr4	-	5641	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	64	5	64	-5	multi-exon	TRUE	canonical	3	106	junction_4	15.2943505832485	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGTT	8898	False	NA	-2	True	AATAAA	-17	NA	129566496	129537777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
Isoform_127921_144	chr4	-	2164	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	46	3500	46	4	multi-exon	FALSE	canonical	3	106	junction_4	15.2943505832485	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTATGCTTGGAT	8880	False	NA	-25	True	NA	NA	NA	129566514	129541272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
Isoform_127927_15	chr4	-	1892	10	FSM	ENSMUSG00000053730.16	ENSMUST00000125445.8	1851	10	-42	1	0	-1	multi-exon	FALSE	canonical	2	5	junction_7	9.25896295822207	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTGTGTCCTGTGAT	9992	False	NA	NA	False	AAAAAG	-20	NA	129590631	129570148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586428_129586512_129586858_129587079_129587678_129587806_129590507
Isoform_127932_43	chr4	-	1809	9	FSM	ENSMUSG00000053730.16	ENSMUST00000102588.10	1810	9	1	0	1	0	multi-exon	FALSE	canonical	2	15	junction_6	5.99869777535091	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTGTGTCCTGTGATT	9993	False	NA	NA	False	AAAAAG	-21	NA	129590630	129570147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586858_129587079_129587678_129587806_129590507
Isoform_12794_7	chr11	-	3325	5	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	115	405	intron_retention	FALSE	canonical	3	629	junction_3	65.1704495918204	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGACTTTGTCACTTA	NA	False	NA	-5	True	AATACA	-11	NA	51891191	51877088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51888726_51891119
Isoform_127946_2471	chr4	-	2696	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	3	1039	3	-1039	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAATGTGATGAATTGT	4984	False	NA	NA	False	AATAAA	-21	NA	129636086	129608650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
Isoform_127949_45	chr4	-	2802	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	-103	1039	-96	-1039	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAATGTGATGAATTGT	4878	False	NA	NA	False	AATAAA	-21	NA	129636192	129608650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
Isoform_127966_16	chr4	-	2381	11	ISM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	83	3	-28	-1	3prime_fragment	FALSE	canonical	3	205	junction_9	24.2991769407937	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTGTCTGGGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	130068512	130059397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685
Isoform_127970_538	chr4	-	1949	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	0	3	0	-1	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTGTCTGGGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	130068595	130059397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
Isoform_127972_7	chr4	-	2120	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105998.8	1976	12	-30	-114	-30	-1	multi-exon	FALSE	canonical	2	10	junction_11	72.1002516014454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTGTCTGGGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	130068945	130059397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068694
Isoform_127978_16	chr4	-	1867	10	FSM	ENSMUSG00000023232.18	ENSMUST00000105996.8	1878	10	9	2	9	-2	multi-exon	FALSE	canonical	2	4	junction_9	3.01027048536535	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTCCCATGTCTTG	7805	False	NA	-3	True	AATAAA	-15	NA	130169370	130147289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130169250
Isoform_127980_30	chr4	-	2127	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCCAGGCTGATGC	NA	False	NA	NA	False	AATAAA	-17	NA	130253750	130209175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
Isoform_127981_120	chr4	-	1412	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	1	700	1	196	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTTTATTCCTATAA	NA	False	NA	-10	True	CATAAA	-30	NA	130253735	130209875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
Isoform_127983_50	chr4	-	1606	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	-12	519	-12	377	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGCTTTCCCTTGTATT	NA	False	NA	-1	True	CATAAA	-19	NA	130253748	130209694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
Isoform_127987_14	chr4	-	2052	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGGGTCCAGGCTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	130253735	130209177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
Isoform_127988_35	chr4	-	1367	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-12	196	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTTTATTCCTATAA	NA	False	NA	-10	True	CATAAA	-30	NA	130253748	130209875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
Isoform_127991_16	chr4	-	1253	6	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-12	203	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	110.937099295051	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCCTATAATCCTTCC	NA	False	NA	-3	True	CATAAA	-37	NA	130253748	130209868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130253668
Isoform_127992_4	chr4	-	1426	6	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-12	376	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	110.937099295051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCGCTTTCCCTTGTAT	NA	False	NA	-2	True	CATAAA	-18	NA	130253748	130209695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130253668
Isoform_127999_20	chr4	-	5560	20	NIC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	36.2164162896367	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGC	5318	False	NA	NA	False	AATAAA	-3	NA	131802623	131650741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
Isoform_128002_5	chr4	-	5681	20	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	38.5763982786771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-5	NA	131776416	131650739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
Isoform_128004_5	chr4	-	5511	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	37.3862059463344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5302	False	NA	NA	False	AATAAA	-4	NA	131802639	131650740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695284_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
Isoform_128005_21	chr4	-	5498	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	31.5264439267525	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5318	False	NA	NA	False	AATAAA	-4	NA	131802623	131650740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
Isoform_128007_13	chr4	-	5621	19	NIC	ENSMUSG00000028906.18	novel	5141	18	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	34.7035060668707	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	AATAAA	-4	NA	131776420	131650740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
Isoform_128008_5	chr4	-	5120	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	37.3644050592552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5306	False	NA	NA	False	AATAAA	-4	NA	131802635	131650740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695284_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
Isoform_12801_7	chr11	-	3444	2	FSM	ENSMUSG00000020390.13	ENSMUST00000124699.2	516	2	117	-3045	117	3045	multi-exon	FALSE	canonical	3	670	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51891189	51885351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_51888726_51891119
Isoform_128010_49	chr4	-	5113	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	31.5274229054918	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCTG	5318	False	NA	NA	False	AATAAA	-6	NA	131802623	131650738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
Isoform_128012_23	chr4	-	5231	19	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	34.6963903911176	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-5	NA	131776416	131650739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
Isoform_128013_6	chr4	-	5066	18	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	33.0719044666603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5297	False	NA	NA	False	AATAAA	-4	NA	131802644	131650740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695284_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
Isoform_128014_4	chr4	-	5188	18	NIC	ENSMUSG00000028906.18	novel	5141	18	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	36.0801683298845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-5	NA	131776439	131650739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695284_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
Isoform_128015_60	chr4	-	5027	18	FSM	ENSMUSG00000028906.18	ENSMUST00000146021.8	5074	18	31	16	2	0	multi-exon	FALSE	canonical	3	68	junction_5	24.1593613426437	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	5340	False	NA	NA	False	AATAAA	-5	NA	131802601	131650739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
Isoform_128017_28	chr4	-	5158	18	FSM	ENSMUSG00000028906.18	ENSMUST00000084253.10	5141	18	-17	0	-4	0	multi-exon	FALSE	canonical	3	49	junction_17	28.8854077694417	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-5	NA	131776406	131650739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
Isoform_128019_4	chr4	-	3888	7	ISM	ENSMUSG00000028906.18	ENSMUST00000238852.2	2375	15	-49	29611	-49	2320	5prime_fragment	FALSE	canonical	3	49	junction_6	30.3351647798759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	131776451	131714541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
Isoform_128030_34	chr4	-	3932	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	194	3	-4	-3	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTTGGCCTGCATGT	NA	False	NA	NA	False	ATTAAA	-16	NA	131939420	131912225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
Isoform_128031_1195	chr4	-	2744	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	233	1152	21	226	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	False	NA	-14	True	AATAAA	-23	NA	131939381	131913374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
Isoform_128034_119	chr4	-	2932	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	45	1152	45	226	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	False	NA	-14	True	AATAAA	-23	NA	131939569	131913374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
Isoform_12804_9	chr11	-	3006	11	FSM	ENSMUSG00000000782.17	ENSMUST00000109071.3	2059	11	3	-950	3	85	multi-exon	FALSE	canonical	3	39	junction_6	94.0672631684371	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174155	52143112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_128050_20	chr4	-	1854	9	FSM	ENSMUSG00000028901.14	ENSMUST00000030733.9	2485	9	19	612	19	40	multi-exon	FALSE	canonical	3	57	junction_3	6.23372881989584	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCGTTGTAACTGCAA	3584	False	NA	-18	True	NA	NA	NA	131979144	131952941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985
Isoform_128052_38	chr4	-	1977	11	FSM	ENSMUSG00000028901.14	ENSMUST00000105965.8	4632	11	-70	2725	11	0	multi-exon	FALSE	canonical	2	6	junction_10	24.0074988284911	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1923	False	NA	-58	True	NA	NA	NA	131988902	131952981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131979741_131979805_131988801
Isoform_128053_5	chr4	-	4702	11	FSM	ENSMUSG00000028901.14	ENSMUST00000105965.8	4632	11	-82	12	-1	-12	multi-exon	FALSE	canonical	2	6	junction_10	24.0074988284911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATAAGTACTAAACGC	1911	False	NA	NA	False	AATAAA	-18	NA	131988914	131950268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131979741_131979805_131988801
Isoform_128054_96	chr4	-	1856	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	70	-1	-11	1	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAACAAAC	1982	False	NA	-57	True	NA	NA	NA	131988843	131952980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
Isoform_128055_71	chr4	-	1927	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	-1	-1	-1	1	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAACAAAC	1911	False	NA	-57	True	NA	NA	NA	131988914	131952980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
Isoform_128056_4	chr4	-	2593	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	46	-714	-35	62	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTGGCTGTCATGGAG	1958	False	NA	NA	False	TATAAA	-15	NA	131988867	131952267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
Isoform_128057_4	chr4	-	4619	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	19	-2713	19	-12	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATAAGTACTAAACGC	1931	False	NA	NA	False	AATAAA	-18	NA	131988894	131950268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
Isoform_128058_67	chr4	-	1877	10	NNC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	16.1528195757556	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAACAAAC	1958	False	NA	-57	True	NA	NA	NA	131988867	131952980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979141_131988801
Isoform_128059_4	chr4	-	4616	10	NNC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	16.1528195757556	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTACTAAACGCCAACTG	1937	False	NA	NA	False	AATAAA	-24	NA	131988888	131950262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979141_131988801
Isoform_128062_16	chr4	-	1226	10	FSM	ENSMUSG00000028898.16	ENSMUST00000147652.8	1017	10	-108	-101	-3	-1	multi-exon	FALSE	canonical	3	16	junction_6	205.952229868128	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2357	False	NA	-1	True	AATAAA	-16	NA	132056808	132039074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132053256_132053357_132055779_132055878_132056663
Isoform_128063_5	chr4	-	1136	9	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	242.984792476813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2349	False	NA	-1	True	AATAAA	-16	NA	132056816	132039074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132053256_132053357_132056663
Isoform_128064_8	chr4	-	1134	9	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	220.972813655888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGCTTCTTCAACT	2346	False	NA	-4	True	AATAAA	-13	NA	132056819	132039077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132055779_132055878_132056663
Isoform_128067_188	chr4	-	1099	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	30	1	-4	-1	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2346	False	NA	-1	True	AATAAA	-16	NA	132056819	132039074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
Isoform_128069_26	chr4	-	1001	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	168.067042016705	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2346	False	NA	-1	True	AATAAA	-16	NA	132056819	132039074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132056663
Isoform_12807_127	chr11	-	2970	10	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-56	83	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	63.2314970740233	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGACTGAGTAGCTGT	NA	False	NA	-6	True	AATAAA	-24	NA	52174214	52143114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_128071_8	chr4	-	998	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	2	19	junction_6	176.968693184266	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2347	False	NA	-1	True	AATAAA	-16	NA	132056818	132039074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132055779_132055878_132056663
Isoform_128072_12	chr4	-	937	7	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	188.905399605199	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2310	False	NA	-1	True	AATAAA	-16	NA	132056855	132039074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132056663
Isoform_128088_301	chr4	-	2270	11	FSM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	6	2	2	-2	multi-exon	FALSE	canonical	3	61	junction_9	136.55039362814	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCTTTGTTTTTATGC	5487	False	NA	-16	True	AATAAA	-15	NA	132073010	132059235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132066513_132066553_132067235_132067318_132072956
Isoform_12809_37	chr11	-	3136	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-56	83	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	83.2218979447156	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGACTGAGTAGCTGT	NA	False	NA	-6	True	AATAAA	-24	NA	52174214	52143114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_128091_1989	chr4	-	2231	10	FSM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	48	6	2	-2	multi-exon	FALSE	canonical	3	372	junction_9	35.0019399815087	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCTTTGTTTTTATGC	5487	False	NA	-16	True	AATAAA	-15	NA	132073010	132059235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
Isoform_128094_56	chr4	-	2493	13	NIC	ENSMUSG00000028896.14	novel	2326	11	NA	NA	-28	-2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_10	276.521347377658	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCTTTGTTTTTATGC	NA	False	NA	-16	True	AATAAA	-15	NA	132080944	132059235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132079432_132079555_132079973_132080010_132080907
Isoform_128103_135	chr4	-	383	3	FSM	ENSMUSG00000085241.8	ENSMUST00000152943.8	437	3	53	1	0	0	multi-exon	FALSE	canonical	3	959	junction_1	21	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132079555_132079973_132080010_132080907
Isoform_128109_3	chr4	-	3993	9	ISM	ENSMUSG00000066043.14	ENSMUST00000084249.11	2349	13	20656	-2317	-7024	-2	3prime_fragment	FALSE	canonical	3	73	junction_8	9.68810481982931	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAACTGAATTTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	132104866	132083242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490
Isoform_128110_68	chr4	-	4492	15	NNC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	21	junction_12	24.1094443345849	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTGAATTTGTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	132149716	132083240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_132083758_132083788_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132110592_132110674_132114202_132114377_132140380_132140435_132149655
Isoform_128112_137	chr4	-	4411	14	NNC	ENSMUSG00000066043.14	novel	4483	13	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	55	junction_1	14.2047579327841	137	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTGAATTTGTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	132149716	132083240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_132083758_132083788_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132149655
Isoform_128113_6	chr4	-	4465	14	NNC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	-12	1	at_least_one_novel_splicesite	TRUE	non_canonical	3	55	junction_1	14.2047579327841	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTGAATTTGTGTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	132149769	132083239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_132083758_132083788_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132149655
Isoform_128115_9	chr4	-	2444	2	FSM	ENSMUSG00000066042.5	ENSMUST00000123604.2	626	2	-591	-1227	-1	3	multi-exon	FALSE	canonical	3	267	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATTCTGATTCTTAC	1046	False	NA	-12	True	AATAAA	-16	NA	132191233	132186038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132187425_132190175
Isoform_128116_305	chr4	-	1653	3	FSM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	25	-3	25	3	multi-exon	FALSE	canonical	3	250	junction_2	8.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATTCTGATTCTTAC	1072	False	NA	-12	True	AATAAA	-16	NA	132191207	132186038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132187425_132190175_132190320_132191084
Isoform_128118_51	chr4	-	1679	3	FSM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	-1	-3	-1	3	multi-exon	FALSE	canonical	3	250	junction_2	8.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATTCTGATTCTTAC	1046	False	NA	-12	True	AATAAA	-16	NA	132191233	132186038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132187425_132190175_132190320_132191084
Isoform_12812_178	chr11	-	2973	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	14	83	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_1	46.9302674187991	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGACTGAGTAGCTGT	NA	False	NA	-6	True	AATAAA	-24	NA	52174144	52143114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_128133_2011	chr4	-	3474	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	1	0	1	0	multi-exon	TRUE	canonical	3	666	junction_4	59.9637750728526	2011	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	-31	True	AATAAA	-22	NA	132237811	132219342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
Isoform_128155_2050	chr4	-	458	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	75	6	11	-6	multi-exon	FALSE	canonical	3	7869	junction_2	284	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCCTGATGCCTTCTA	9316	False	NA	-26	True	AATAAA	-13	NA	132260895	132257871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132258135_132260606_132260699_132260792
Isoform_128156_651	chr4	-	500	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	33	6	-31	-6	multi-exon	FALSE	canonical	3	7869	junction_2	284	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCCTGATGCCTTCTA	9274	False	NA	-26	True	AATAAA	-13	NA	132260937	132257871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132258135_132260606_132260699_132260792
Isoform_128166_55	chr4	-	1815	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	27	2403	9	1206	multi-exon	FALSE	canonical	3	48	junction_1	6.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATGTACCACTAAGTG	4071	False	NA	-9	True	ATTAAA	-21	NA	132459830	132454610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132455882_132458186_132458384_132459483
Isoform_128168_9	chr4	-	4208	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	27	10	9	-10	multi-exon	FALSE	canonical	3	48	junction_1	6.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAAACTTACAATTGTTTA	4071	False	NA	NA	False	AATAAA	-10	NA	132459830	132452217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132455882_132458186_132458384_132459483
Isoform_128169_4	chr4	-	3958	3	FSM	ENSMUSG00000037752.5	ENSMUST00000150104.2	376	3	17	-3599	17	-10	multi-exon	FALSE	canonical	3	5	junction_2	21.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAAACTTACAATTGTTTA	4079	False	NA	NA	False	AATAAA	-10	NA	132459822	132452217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132455882_132458186_132458384_132459725
Isoform_128170_5	chr4	-	1573	3	FSM	ENSMUSG00000037752.5	ENSMUST00000150104.2	376	3	8	-1205	8	1205	multi-exon	FALSE	canonical	3	5	junction_2	21.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGTATGTACCACTAAGT	4070	False	NA	-10	True	ATTAAA	-20	NA	132459831	132454611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132455882_132458186_132458384_132459725
Isoform_128171_29	chr4	-	1948	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	48	10	48	-10	multi-exon	FALSE	canonical	3	69	junction_5	8.56666534317997	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACAGTGCAACCGTGAG	NA	False	NA	-11	True	AATAAA	-21	NA	132484515	132460286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
Isoform_128172_93	chr4	-	1935	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	70	1	70	-1	multi-exon	FALSE	canonical	3	69	junction_5	8.56666534317997	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACCGTGAGGGATCACAG	NA	False	NA	-2	True	AATAAA	-30	NA	132484493	132460277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
Isoform_128174_6	chr4	-	1131	6	NIC	ENSMUSG00000028885.9	novel	2006	8	NA	NA	60	-5158	intron_retention	FALSE	canonical	3	69	junction_3	10.1311401135312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGGGTCACACCGTGGAA	NA	False	NA	NA	False	CATAAA	-17	NA	132484503	132465434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
Isoform_128176_66	chr4	-	1998	7	FSM	ENSMUSG00000028882.14	ENSMUST00000105919.2	1090	7	-11	-897	0	-1	multi-exon	FALSE	canonical	3	27	junction_1	56.674509261219	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132555515_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
Isoform_128183_11	chr4	-	2249	7	NIC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	60.1165534607565	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570119
Isoform_128184_16	chr4	-	2117	8	NNC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	76.5037013910478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570119_132570236_132570367
Isoform_128186_788	chr4	-	2001	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	35	1	0	-1	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
Isoform_128187_34	chr4	-	2068	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	-32	1	-32	-1	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570512	132554240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
Isoform_128188_12	chr4	-	2105	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	44	-112	-1	112	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAATACAAAAATTATCAT	NA	False	NA	NA	False	AATAAA	-12	NA	132570436	132554127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
Isoform_128190_21	chr4	-	2070	8	NNC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	77.7027302333341	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132564450_132564520_132567954_132568016_132570367
Isoform_128193_197	chr4	-	2281	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	92	561	92	-561	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTATTTTTATGAGTT	6185	False	NA	-9	True	AATAAA	-15	NA	132611728	132581372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_128194_96	chr4	-	2024	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	51	859	51	-859	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTTGTCTACTGCCC	6144	False	NA	NA	False	AATAAA	-18	NA	132611769	132581670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_128196_48	chr4	-	2841	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	92	1	92	-1	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTGCACTTGATTG	6185	False	NA	-5	True	AATAAA	-13	NA	132611728	132580812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_128197_44	chr4	-	2356	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	17	561	17	-561	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTATTTTTATGAGTT	6110	False	NA	-9	True	AATAAA	-15	NA	132611803	132581372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_128198_6	chr4	-	2651	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	-278	561	-278	-561	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTATTTTTATGAGTT	5815	False	NA	-9	True	AATAAA	-15	NA	132612098	132581372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_128199_7	chr4	-	2893	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	39	2	39	-2	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTTGCACTTGATT	6132	False	NA	-6	True	AATAAA	-12	NA	132611781	132580813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_128204_227	chr4	-	3030	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	21	2	21	-2	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGTTGTGATTCAGT	NA	False	NA	-2	True	AATAAA	-17	NA	132649848	132626525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_128205_7	chr4	-	3296	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	-245	2	-245	-2	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGTTGTGATTCAGT	NA	False	NA	-2	True	AATAAA	-17	NA	132650114	132626525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_128206_7	chr4	-	3219	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	-168	2	-168	-2	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGTTGTGATTCAGT	NA	False	NA	-2	True	AATAAA	-17	NA	132650037	132626525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_128209_12	chr4	-	3133	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	-85	5	-85	-5	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCATGTTGTGATTC	NA	False	NA	-5	True	AATAAA	-14	NA	132649954	132626528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_128214_112	chr4	-	2946	8	FSM	ENSMUSG00000028878.12	ENSMUST00000097856.10	1863	8	-47	-1036	18	-2	multi-exon	FALSE	canonical	3	35	junction_3	31.9367998345712	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGTTGTGATTCAGT	NA	False	NA	-2	True	AATAAA	-17	NA	132649851	132626525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_128222_10	chr4	-	3157	10	NNC	ENSMUSG00000028878.12	novel	3053	9	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	48.4722142629729	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCATGTTGTGATTCAG	NA	False	NA	-3	True	AATAAA	-16	NA	132649847	132626526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_132628620_132629313_132629416_132631208_132631345_132636936_132637066_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_128224_14	chr4	-	1932	15	FSM	ENSMUSG00000028860.14	ENSMUST00000030674.8	1951	15	10	9	10	-1	multi-exon	TRUE	canonical	1	4	junction_9	2.42541812090709	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACTGACTGCTTAAC	NA	False	NA	-5	True	AATAAA	-11	NA	132990414	132980409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132980620_132980765_132980972_132982843_132982944_132983044_132983124_132983352_132983512_132983798_132983896_132984175_132984343_132984446_132984561_132984727_132984823_132985044_132985133_132986171_132986218_132986292_132986369_132986598_132986748_132988163_132988393_132990297
Isoform_128226_22	chr4	-	1587	7	FSM	ENSMUSG00000028857.17	ENSMUST00000134781.8	613	7	-133	-841	0	-1	multi-exon	FALSE	canonical	3	22	junction_5	347.535609686259	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCTGTCATTTTCT	NA	False	NA	-13	True	AATAAA	-13	NA	133005062	132993356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132997980_132998126_132998273_132998359_133004841
Isoform_128229_1130	chr4	-	1441	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	42	1	1	-1	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCTGTCATTTTCT	NA	False	NA	-13	True	AATAAA	-13	NA	133005061	132993356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
Isoform_128230_105	chr4	-	1356	5	FSM	ENSMUSG00000028857.17	ENSMUST00000139030.2	546	5	20	-830	1	-1	multi-exon	FALSE	canonical	3	79	junction_4	309.884151740614	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCTGTCATTTTCT	NA	False	NA	-13	True	AATAAA	-13	NA	133005061	132993356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_133004841
Isoform_128258_1025	chr4	-	3960	16	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-12	-7	combination_of_known_junctions	FALSE	canonical	3	428	junction_6	32.7350305059003	1025	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8978	False	NA	-6	True	ATTAAA	-15	NA	133080201	133019776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
Isoform_128259_34	chr4	-	4526	17	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	1	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	126.017793882451	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTGGTGGCATTTGTT	8388	False	NA	-4	True	ATTAAA	-17	NA	133080791	133019774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096_133080490_133080515
Isoform_128264_69	chr4	-	4210	17	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	60	junction_16	112.020575676971	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8388	False	NA	-6	True	ATTAAA	-15	NA	133080791	133019776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096_133080261_133080600
Isoform_128265_58	chr4	-	3918	16	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-235	-7	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_15	123.385394417474	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	4029	False	NA	-6	True	ATTAAA	-15	NA	133066870	133019776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133066807
Isoform_128273_232	chr4	-	3957	16	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	107.699375836425	232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8978	False	NA	-6	True	ATTAAA	-15	NA	133080201	133019776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029136_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
Isoform_128274_25	chr4	-	4001	16	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-56	-7	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	107.699375836425	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8934	False	NA	-6	True	ATTAAA	-15	NA	133080245	133019776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029136_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
Isoform_128281_13	chr4	-	1626	2	FSM	ENSMUSG00000056596.9	ENSMUST00000125541.2	1654	2	29	-1	29	1	multi-exon	FALSE	canonical	3	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGTGTGGTTTTAAGGT	NA	False	NA	-3	True	AATAAA	-19	NA	133225832	133218409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133219142_133224938
Isoform_128292_4027	chr4	-	1290	8	FSM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	22	4	22	-4	multi-exon	FALSE	canonical	3	2323	junction_4	508.87928082108	4027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTGTGTCCCTCGTCT	4482	False	NA	NA	False	ATTAAA	-15	NA	133273285	133259856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
Isoform_128312_503	chr4	-	2893	8	FSM	ENSMUSG00000037553.15	ENSMUST00000084238.5	4580	8	-7	1694	-7	1676	multi-exon	FALSE	canonical	3	285	junction_4	22.238961949053	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTGCTTTAGTTTT	NA	False	NA	-15	True	AATAAA	-20	NA	133360787	133334303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
Isoform_128315_13	chr4	-	2742	7	NIC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	-16	1677	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	122.239859838489	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTAGTTTTT	NA	False	NA	-14	True	AATAAA	-21	NA	133360796	133334302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133360389
Isoform_128321_128	chr4	-	2913	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	28	1038	28	829	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGGTCTGAATCTTGG	NA	False	NA	-12	True	NA	NA	NA	133399930	133388735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
Isoform_128322_16	chr4	-	4443	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	14	-478	14	478	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGGATGTCTTTTTGT	NA	False	NA	-1	True	AATACA	-22	NA	133399944	133387219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
Isoform_128328_39	chr4	-	1805	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	14	-829	14	829	multi-exon	FALSE	canonical	3	52	junction_1	36	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGGTCTGAATCTTGG	NA	False	NA	-12	True	NA	NA	NA	133399944	133388735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133390103_133397048_133397172_133399629
Isoform_128330_7	chr4	-	3306	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	30	-2346	30	479	multi-exon	FALSE	canonical	3	52	junction_1	36	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGATGTCTTTTTGTT	NA	False	NA	0	True	AATACA	-23	NA	133399928	133387218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133390103_133397048_133397172_133399629
Isoform_128333_5	chr4	-	2599	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	30	-1312	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.7302232949507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATCTGGCTTAAATTG	NA	False	NA	NA	False	NA	NA	NA	133399928	133390876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_133391193_133391229_133393091_133397048_133397172_133399629
Isoform_128337_37	chr4	-	2769	3	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	68195	953	35360	-20	3prime_fragment	FALSE	canonical	3	162	junction_2	10	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	4441	False	NA	NA	False	NA	NA	NA	133412727	133407271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_133409367_133411745_133411877_133412184
Isoform_128372_17	chr4	-	8555	20	FSM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	-371	3	0	-3	multi-exon	FALSE	canonical	3	56	junction_19	32.8919156684966	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTGTGAAGCTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	133481293	133406321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
Isoform_128377_13	chr4	-	7116	20	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	40.3589846927467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTGTGAAGCTTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	133481298	133406320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133481224
Isoform_128403_3418	chr4	-	3127	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	4	4	4	0	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	3418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7968	False	NA	-9	True	AATAAA	-14	NA	133615104	133574604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
Isoform_128404_191	chr4	-	3154	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	-23	4	-23	0	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7941	False	NA	-9	True	AATAAA	-14	NA	133615131	133574604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
Isoform_128419_1830	chr4	-	1159	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	96	10	3	-10	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	1830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAATGCTGCCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	133695216	133692058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
Isoform_128421_51	chr4	-	1223	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	40	2	40	-2	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCTCTGATCTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	133695272	133692050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
Isoform_128431_3	chr4	-	1447	9	FSM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	-2	1688	1	176	multi-exon	FALSE	canonical	1	2	junction_8	23.2025725944344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCATTAGCTATATGCC	NA	False	NA	-24	True	AATACA	-20	NA	133728200	133698055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727651_133728035
Isoform_128432_4	chr4	-	3117	9	FSM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	22	-6	6	6	multi-exon	FALSE	canonical	1	2	junction_8	23.2025725944344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTGTGTGGTAACTGC	NA	False	NA	NA	False	AAAAAG	-27	NA	133728176	133696361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727651_133728035
Isoform_128434_50	chr4	-	3182	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	15	22	-4	7	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTGTGTGGTAACTGCA	NA	False	NA	NA	False	AAAAAG	-28	NA	133728186	133696360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
Isoform_128438_8	chr4	-	3072	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105889.4	890	9	11	-2193	11	7	multi-exon	FALSE	canonical	2	7	junction_8	21.5928228816892	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTGTGTGGTAACTGCA	NA	False	NA	NA	False	AAAAAG	-28	NA	133728218	133696360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728177
Isoform_128441_7	chr4	-	3190	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105887.8	2038	9	-9	-1143	7	7	multi-exon	FALSE	canonical	3	19	junction_1	18.0346887968714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTGTGTGGTAACTGCA	NA	False	NA	NA	False	AAAAAG	-28	NA	133728191	133696360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133698568_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
Isoform_128444_137	chr4	-	3469	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	24	12	24	-12	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGTACTGGTCTCTCT	8274	False	NA	-3	True	AATAAA	-18	NA	133746128	133730652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
Isoform_128445_68	chr4	-	3505	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	-13	13	-13	-13	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGGTACTGGTCTCTC	8237	False	NA	-4	True	AATAAA	-17	NA	133746165	133730653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
Isoform_12845_384	chr11	-	2933	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	-72	1757	-72	1309	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCAACTTTGTTC	NA	False	NA	-41	True	ATTAAA	-19	NA	53191356	53152397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
Isoform_128450_402	chr4	-	701	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	36	6	-14	1	multi-exon	FALSE	canonical	3	1437	junction_2	42.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCTTGTGGTGTC	9262	False	NA	-11	True	ATTAAA	-16	NA	133856064	133854722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133855118_133855228_133855397_133855926
Isoform_128451_491	chr4	-	676	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	61	6	9	1	multi-exon	FALSE	canonical	3	1437	junction_2	42.5	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCTTGTGGTGTC	9287	False	NA	-11	True	ATTAAA	-16	NA	133856039	133854722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133855118_133855228_133855397_133855926
Isoform_128458_430	chr4	-	3814	14	FSM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	79	0	18	0	multi-exon	FALSE	canonical	3	315	junction_5	49.639648211447	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914344	133857168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
Isoform_128459_373	chr4	-	3853	14	FSM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	40	0	13	0	multi-exon	FALSE	canonical	3	315	junction_5	49.639648211447	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914383	133857168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
Isoform_12846_4262	chr11	-	2823	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	39	1756	-7	1310	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	4262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGTCAACTTTGTTCT	NA	False	NA	-40	True	ATTAAA	-20	NA	53191245	53152396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
Isoform_128468_180	chr4	-	1975	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	2	17	2	1	multi-exon	FALSE	canonical	3	614	junction_2	27	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCAGTGTGCATGTATT	7670	False	NA	-10	True	NA	NA	NA	133972901	133970616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133972242_133972335_133972399_133972614
Isoform_128469_283	chr4	-	633	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	1	1360	1	-1342	multi-exon	FALSE	canonical	3	614	junction_2	27	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCACACCTCCGATACTAA	7669	False	NA	-29	True	AATAAA	-15	NA	133972902	133971959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133972242_133972335_133972399_133972614
Isoform_128471_5	chr4	-	2075	2	FSM	ENSMUSG00000028840.11	ENSMUST00000129183.2	2020	2	-54	-1	-4	1	multi-exon	FALSE	canonical	3	614	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCAGTGTGCATGTATT	7664	False	NA	-10	True	NA	NA	NA	133972907	133970616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133972399_133972614
Isoform_128475_106	chr4	-	4482	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	23	4	-5	-4	multi-exon	FALSE	canonical	3	58	junction_1	10	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTTGAAAGTTCTCT	4314	False	NA	NA	False	AATAAA	-14	NA	134014541	134002317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134006428_134011556_134011859_134014471
Isoform_128479_26	chr4	-	4537	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	-27	-1	-27	0	multi-exon	FALSE	canonical	3	58	junction_1	10	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAAAGTTCTCTTGCTA	4264	False	NA	NA	False	AATAAA	-19	NA	134014591	134002312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134006428_134011556_134011859_134014471
Isoform_128481_9	chr4	-	4649	3	FSM	ENSMUSG00000050890.16	ENSMUST00000061234.14	4686	3	32	5	32	-4	multi-exon	FALSE	canonical	3	10	junction_2	24	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTTGAAAGTTCTCT	3681	False	NA	NA	False	AATAAA	-14	NA	134015174	134002317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134006428_134011556_134011859_134014937
Isoform_128482_5	chr4	-	4709	3	FSM	ENSMUSG00000050890.16	ENSMUST00000061234.14	4686	3	-29	6	-29	-5	multi-exon	FALSE	canonical	3	10	junction_2	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCTTGAAAGTTCTC	3620	False	NA	NA	False	AATAAA	-13	NA	134015235	134002318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134006428_134011556_134011859_134014937
Isoform_128484_3	chr4	-	3090	2	FSM	ENSMUSG00000050890.16	ENSMUST00000142504.2	1039	2	-24	-2027	1	2027	multi-exon	FALSE	canonical	3	78	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAGGAAAAAAAAAA	4295	False	NA	NA	False	AATACA	-27	NA	134014560	134008857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134011859_134014471
Isoform_128485_49	chr4	-	3710	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	-15	431	-15	-431	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGCCTCTTGAACTT	7008	False	NA	-1	True	NA	NA	NA	134099884	134084113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
Isoform_128486_102	chr4	-	4113	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	12	1	12	-1	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCGGGCTATAAATACGC	7035	False	NA	-1	True	AATAAA	-22	NA	134099857	134083683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
Isoform_128487_5	chr4	-	2768	6	ISM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	-24	5345	-24	988	5prime_fragment	FALSE	canonical	3	42	junction_3	5.19230199429887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGGGCTGGAGAAAT	6999	False	NA	NA	False	AATAAA	-10	NA	134099893	134089027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
Isoform_128491_12	chr4	-	1975	7	NIC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	192.098643641461	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	False	NA	-8	True	ATTAAA	-15	NA	134262367	134252875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262215
Isoform_128492_14	chr4	-	1438	7	NIC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	-15	-541	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	192.098643641461	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTCTCCATAATTG	NA	False	NA	-2	True	AATGAA	-18	NA	134262370	134253415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262215
Isoform_128493_89	chr4	-	2000	7	FSM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	11	14	1	0	multi-exon	FALSE	canonical	3	105	junction_6	159.506530691797	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGAATTTTTTTCTTG	NA	False	NA	-7	True	ATTAAA	-16	NA	134262568	134252874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
Isoform_128495_161	chr4	-	1884	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	87	-2	-2	2	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTTGGTTCATCTC	NA	False	NA	2	True	ATTAAA	-25	NA	134262611	134252865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
Isoform_128500_26	chr4	-	1890	7	NNC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	178.015604809117	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGTGAATTTTTTTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	134262567	134252876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262499
Isoform_128503_24	chr4	-	3439	12	FSM	ENSMUSG00000050989.11	ENSMUST00000060435.8	3445	12	1	5	1	-5	multi-exon	FALSE	canonical	3	9	junction_3	3.13603423830188	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTAGCTTGGTGCTTTTCC	8370	False	NA	-4	True	AATAAA	-14	NA	134279476	134265207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272625_134272791_134273002_134275261_134275396_134278727_134278846_134279247
Isoform_128504_18	chr4	-	4702	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	13	0	13	0	multi-exon	FALSE	canonical	3	25	junction_8	6.8947219003122	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGTATAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	134431588	134289000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
Isoform_128505_57	chr4	-	3385	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	13	1317	13	-1317	multi-exon	FALSE	canonical	3	25	junction_8	6.8947219003122	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGATTGGACTCATTG	NA	False	NA	NA	False	AATAAA	-18	NA	134431588	134290317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
Isoform_128506_307	chr4	-	2664	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	25	3860	25	1162	multi-exon	FALSE	canonical	3	50	junction_1	8.8175960442742	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGAGTATTGCTGGT	NA	False	NA	-3	True	AATAAA	-24	NA	134495310	134472724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
Isoform_128507_11	chr4	-	6548	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	1	0	1	0	multi-exon	TRUE	canonical	3	50	junction_1	8.8175960442742	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	134495334	134468864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
Isoform_128515_8	chr4	-	2702	12	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	15	-1349	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	71.6409781624045	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATTTTGCCTTTTTATG	NA	False	NA	-18	True	ATTAAA	-22	NA	134580613	134531418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134564077_134564346_134565159_134565302_134580348
Isoform_128517_7	chr4	-	4101	12	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-12	-5	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	71.6409781624045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTAGTTTCCTGCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	134580668	134530074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134564077_134564346_134565159_134565302_134580348
Isoform_128520_139	chr4	-	3791	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	32	3	4	-3	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTAGTTTCCTGCCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	134580624	134530072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
Isoform_128522_66	chr4	-	3835	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	-12	3	-12	-3	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTAGTTTCCTGCCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	134580668	134530072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
Isoform_128531_4	chr4	-	1003	2	FSM	ENSMUSG00000028826.15	ENSMUST00000136113.2	1011	2	0	8	0	-8	multi-exon	FALSE	canonical	3	192	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAGAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	134580628	134564578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134565302_134580348
Isoform_128533_544	chr4	-	1174	7	FSM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	28	2	19	-2	multi-exon	FALSE	canonical	3	544	junction_1	61.5938759582116	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTTCTCGTTATACC	NA	False	NA	-22	True	ATTAAA	-17	NA	134642307	134625161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
Isoform_128539_24	chr4	-	1253	7	FSM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	6	-540	6	-2	multi-exon	FALSE	canonical	3	28	junction_6	233.0748568355	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTTCTCGTTATACC	NA	False	NA	-22	True	ATTAAA	-17	NA	134642320	134625161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640573_134642199
Isoform_128549_2624	chr4	-	4065	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	52	2	52	-2	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	2624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTCTTTTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	135000073	134941281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
Isoform_128553_537	chr4	-	4089	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	28	2	28	-2	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTCTTTTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	135000097	134941281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
Isoform_128588_27	chr4	-	3662	18	FSM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	78	0	-15	0	multi-exon	FALSE	canonical	3	58	junction_11	319.821966045795	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080477	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_128594_35	chr4	-	3572	18	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	317.863412158316	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_128604_799	chr4	-	3661	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	94	-603	1	0	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080461	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_128605_208	chr4	-	3754	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	1	-603	1	0	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080554	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_128614_29	chr4	-	3885	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_16	359.875887384787	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
Isoform_128615_66	chr4	-	3785	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_16	359.875887384787	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080455	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
Isoform_128628_343	chr4	-	3620	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	170	7	0	0	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_128629_73	chr4	-	3713	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	77	7	0	0	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_128634_29	chr4	-	3727	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_15	395.582510345629	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGCCACTCACATT	NA	False	NA	-6	True	AATAAA	-13	NA	135080438	135047800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
Isoform_128643_86	chr4	-	3678	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_5	295.204790801421	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080481	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_128649_43	chr4	-	3615	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_5	299.84422387925	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080460	135047801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_128666_8	chr4	-	1833	5	NIC	ENSMUSG00000043924.17	novel	2000	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	5.8309518948453	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTTTGTCACCTTGC	5693	False	NA	-1	True	ATTAAA	-16	NA	135125537	135096887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135098022_135099187_135099273_135104301_135104385_135107962_135108150_135125193
Isoform_128667_3	chr4	-	1596	5	NNC	ENSMUSG00000043924.17	novel	1801	5	NA	NA	4177	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	7.44983221287567	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTTTTTTGTCACCTT	NA	False	NA	-3	True	ATTAAA	-14	NA	135108779	135096889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_135098022_135099187_135099273_135104301_135104388_135107962_135108150_135108673
Isoform_128668_17	chr4	-	961	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	31.244999599936	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGAGCAGTCTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	135161125	135139618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135139802_135145690_135145863_135147556_135147731_135152524_135152754_135160922
Isoform_128669_21	chr4	-	939	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	31.244999599936	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGAGCAGTCTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	135161103	135139618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135139802_135145690_135145863_135147556_135147731_135152524_135152754_135160922
Isoform_128670_7	chr4	-	939	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	31	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	38.7774096607806	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTCATTGAGCAGTCTC	NA	False	NA	-7	True	AATAAA	-19	NA	135161103	135139621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135139802_135145690_135145863_135147556_135147731_135152524_135152757_135160922
Isoform_128671_7	chr4	-	4737	3	ISM	ENSMUSG00000059713.13	ENSMUST00000030606.14	5111	5	13329	5	4743	-5	3prime_fragment	FALSE	canonical	3	66	junction_1	15.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGCTCATTGAGCAGTC	NA	False	NA	-9	True	AATAAA	-17	NA	135147835	135139623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_135143910_135145690_135145863_135147556
Isoform_128673_93	chr4	-	5045	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCATTGAGCAGTCTCTT	NA	False	NA	-5	True	AATAAA	-21	NA	135161102	135139619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
Isoform_128675_3	chr4	-	3676	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-11	-1413	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGATGCCTTGGGTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	135161145	135141031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
Isoform_128676_3	chr4	-	1386	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-12	2431	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTTGTTCAGTAGACA	NA	False	NA	NA	False	AATATA	-13	NA	135161146	135143322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
Isoform_128677_12	chr4	-	5064	5	FSM	ENSMUSG00000059713.13	ENSMUST00000030606.14	5111	5	41	6	11	-6	multi-exon	FALSE	canonical	3	12	junction_4	34.9311823447189	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGCTCATTGAGCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	135161123	135139624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152757_135160922
Isoform_128678_4	chr4	-	2439	4	FSM	ENSMUSG00000059713.13	ENSMUST00000156635.2	724	4	20	-1735	20	1735	multi-exon	FALSE	canonical	3	97	junction_1	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	NA	False	NA	NA	False	NA	NA	NA	135161114	135144018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135145863_135147556_135147731_135152524_135152754_135160922
Isoform_128679_16	chr4	-	2474	13	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	-25	375	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	20.9103576142436	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCAGCTTTCTTCCTG	4280	False	NA	-1	True	NA	NA	NA	135221842	135178821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_128680_6	chr4	-	5090	13	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	-25	-3	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	20.9103576142436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTCGGGTCCTGTGTTG	4280	False	NA	-6	True	ATTAAA	-19	NA	135221842	135176205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_128688_43	chr4	-	2443	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	91	2619	-26	375	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCAGCTTTCTTCCTG	4279	False	NA	-1	True	NA	NA	NA	135221843	135178821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_128690_10	chr4	-	3812	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	65	1276	-52	-1276	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGATCGCTGGTAGGG	4253	False	NA	-9	True	ATTAAA	-14	NA	135221869	135177478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_128693_22	chr4	-	5059	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	92	2	-25	-2	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCGGGTCCTGTGTTGC	4280	False	NA	-5	True	ATTAAA	-20	NA	135221842	135176204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_128694_3	chr4	-	2187	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	-17	2983	-17	11	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCGGACATGGACCTTCC	4171	False	NA	NA	False	AAAAAG	-18	NA	135221951	135179185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_128697_5	chr4	-	1665	3	ISM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	25134	-630	25134	630	3prime_fragment	FALSE	canonical	3	271	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTCCGTGTCCCTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	135275807	135268568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_135270085_135273553_135273619_135275723
Isoform_128700_57	chr4	-	2791	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	-2	0	-2	0	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	-2	True	AATAAA	-20	NA	135300943	135269198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
Isoform_128701_61	chr4	-	2702	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	87	0	87	0	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	-1	True	NA	-2	True	AATAAA	-20	NA	135300854	135269198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
Isoform_128705_9	chr4	-	1770	10	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	17687	1	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_6	64.4810241011711	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTTTTCATGCGCTTCT	NA	False	NA	-1	True	AATAAA	-21	NA	135283254	135269197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113
Isoform_128708_236	chr4	-	2699	16	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_11	58.2178285025778	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	-1	True	NA	-2	True	AATAAA	-20	NA	135300854	135269198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
Isoform_128714_484	chr4	-	1894	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	28	-3	28	3	multi-exon	FALSE	canonical	3	336	junction_2	18.5	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTTTATGTAAGTGA	NA	False	NA	1	True	AATAAA	-30	NA	135601133	135598225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135599766_135600205_135600411_135600984
Isoform_128721_6	chr4	-	2055	3	NNC	ENSMUSG00000028675.13	novel	1919	3	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	182.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCTTTTTATGTAAGT	NA	False	NA	-1	True	AATAAA	-28	NA	135600886	135598227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_135599766_135600205_135600411_135600574
Isoform_128724_420	chr4	-	1595	10	FSM	ENSMUSG00000028670.15	ENSMUST00000067567.5	1626	10	24	7	1	-7	multi-exon	TRUE	canonical	3	407	junction_1	24.7476149243608	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCAGGGCTCCCTTATG	NA	False	NA	-18	True	ATTAAA	-13	NA	135699913	135695541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
Isoform_128725_20	chr4	-	1666	9	FSM	ENSMUSG00000028670.15	ENSMUST00000145350.2	1119	9	-14	-533	1	-7	multi-exon	FALSE	canonical	3	407	junction_1	24.7474746186353	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCAGGGCTCCCTTATG	NA	False	NA	-18	True	ATTAAA	-13	NA	135699913	135695541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135696379_135696454_135696629_135696738_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
Isoform_128726_26	chr4	-	1672	9	NIC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	0	-7	intron_retention	FALSE	canonical	3	428	junction_2	20.3127884594902	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCAGGGCTCCCTTATG	NA	False	NA	-18	True	ATTAAA	-13	NA	135699914	135695541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
Isoform_128728_9	chr4	-	2028	5	ISM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	30	144	30	-144	intron_retention	FALSE	canonical	3	496	junction_4	29.9614335438076	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTCTTTTCTTCTG	2145	False	NA	-3	True	AATAAA	-14	NA	135714545	135702914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702
Isoform_12873_2094	chr11	-	462	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	28	1031	28	0	multi-exon	FALSE	canonical	3	5710	junction_1	0	2094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2975	False	NA	-8	True	AATAAA	-17	NA	53321626	53319779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_53319978_53321362
Isoform_128731_806	chr4	-	1527	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	30	143	30	-143	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTCTTTTCTTCTGT	2145	False	NA	-2	True	AATAAA	-15	NA	135714545	135702913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
Isoform_128733_35	chr4	-	1656	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	48	-4	48	4	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTCAGCCTCTGCATTT	2163	False	NA	1	True	AATAAA	-23	NA	135714527	135702766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
Isoform_128738_75	chr4	-	2718	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	64	1926	64	-1926	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCAGGGTTTTTTGTTTT	7768	False	NA	-10	True	AATAAA	-27	NA	135749010	135732604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
Isoform_128739_107	chr4	-	4601	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	107	0	107	0	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGAGCCTTTCCTCAT	7811	False	NA	-1	True	AATAAA	-17	NA	135748967	135730678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
Isoform_128740_110	chr4	-	2668	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	114	1926	114	-1926	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCAGGGTTTTTTGTTTT	7818	False	NA	-10	True	AATAAA	-27	NA	135748960	135732604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
Isoform_128743_10	chr4	-	2819	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	74	1815	74	-1815	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCATTCTTGTCCTGGG	7778	False	NA	NA	False	ATTAAA	-18	NA	135749000	135732493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
Isoform_128744_8	chr4	-	2776	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	4	1928	4	-1928	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCAGGGTTTTTTGTT	7708	False	NA	-12	True	AATAAA	-25	NA	135749070	135732606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
Isoform_128755_4497	chr4	-	589	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	20	224	20	-8	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	4497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCATGTTACAGTTGT	NA	False	NA	-12	True	AATAAA	-32	NA	135780684	135777265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
Isoform_128763_3	chr18	+	590	1	FSM	ENSMUSG00000058064.7	ENSMUST00000079733.7	534	1	-19	-37	-19	37	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGCAAAAAAAAAGAAGGA	NA	False	NA	NA	False	AATAAA	-34	NA	15965831	15966421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_15965800_15966400
Isoform_12877_403	chr11	-	401	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	4	0	4	0	multi-exon	FALSE	canonical	3	885	junction_2	2412.5	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2951	False	NA	-8	True	AATAAA	-17	NA	53321650	53319779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_53319978_53321362_53321530_53321614
Isoform_128786_2177	chr4	-	3061	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	-52	19	-16	-19	multi-exon	FALSE	canonical	3	991	junction_18	209.393504887799	2177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATTTTATATGAAAAT	NA	False	NA	-28	True	AATAAA	-7	NA	136330050	136277873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
Isoform_128787_168	chr4	-	3124	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	-97	1	-61	-1	multi-exon	FALSE	canonical	3	991	junction_18	209.393504887799	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTAATTGTGTGT	NA	False	NA	-10	True	AATAAA	-25	NA	136330095	136277855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
Isoform_128797_1696	chr4	-	2990	19	FSM	ENSMUSG00000036940.16	ENSMUST00000116273.9	3008	19	1	17	1	-13	multi-exon	FALSE	canonical	3	907	junction_17	208.707545398275	1696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGAAAATTTATTT	NA	False	NA	-22	True	AATAAA	-13	NA	136330033	136277867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
Isoform_128798_142	chr4	-	3027	19	FSM	ENSMUSG00000036940.16	ENSMUST00000116273.9	3008	19	-31	12	-31	-8	multi-exon	FALSE	canonical	3	907	junction_17	208.707545398275	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAATTTATTTTTAAT	NA	False	NA	-17	True	AATAAA	-18	NA	136330065	136277862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
Isoform_128813_12	chr4	-	4835	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105845.9	10902	16	1	6066	1	3	multi-exon	FALSE	canonical	3	19	junction_7	4.97728172131469	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTACTCTGTAAGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	136563298	136380915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
Isoform_128814_11	chr4	-	4182	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105845.9	10902	16	-24	6744	-24	363	multi-exon	FALSE	canonical	3	19	junction_7	4.97728172131469	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTGGATTTTTTTATA	NA	False	NA	-1	True	AATACA	-24	NA	136563323	136381593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
Isoform_128815_18	chr4	-	4093	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105845.9	10902	16	-23	6832	-23	275	multi-exon	FALSE	canonical	3	19	junction_7	4.97728172131469	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGAGGACTTGATCCT	NA	False	NA	2	True	AATGAA	-22	NA	136563322	136381681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
Isoform_128816_3	chr4	-	4060	16	FSM	ENSMUSG00000028664.15	ENSMUST00000059287.14	4804	16	-21	765	-3	273	multi-exon	FALSE	canonical	1	3	junction_10	7.67390962214756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTGAGGACTTGATC	NA	False	NA	0	True	AATGAA	-20	NA	136563288	136381683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402845_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
Isoform_128818_3	chr4	-	3832	5	ISM	ENSMUSG00000060862.11	ENSMUST00000049583.8	7192	19	-104	24812	2	9934	5prime_fragment	FALSE	canonical	3	17	junction_3	2.06155281280883	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	9680	False	NA	NA	False	NA	NA	NA	136776110	136731854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
Isoform_128828_1565	chr4	-	2051	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	50	7	29	-7	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGAGCCTGAAGGTTAT	NA	False	NA	-8	True	ATTAAA	-17	NA	137084981	137047013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
Isoform_128830_36	chr4	-	766	7	NNC	ENSMUSG00000006699.18	novel	2108	6	NA	NA	-2	764	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	682.342146987533	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACGCCCTGCACCTAC	NA	False	NA	-9	True	NA	NA	NA	137085012	137048308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956_137084971_137084991
Isoform_128834_73	chr4	-	2133	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	-32	7	-32	-7	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGAGCCTGAAGGTTAT	NA	False	NA	-8	True	ATTAAA	-17	NA	137085063	137047013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
Isoform_12885_43	chr11	-	5230	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	12	-89	-12	89	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGAGTTGATTAGTAGT	NA	False	NA	-11	True	NA	NA	NA	53598134	53540256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
Isoform_128859_9	chr4	-	2443	12	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	455.139012457905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGAGTCTTTGTGGTCA	NA	False	NA	-1	True	AATAAA	-25	NA	137509534	137469042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137509471
Isoform_12886_429	chr11	-	5139	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	4	10	4	-10	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTATTTGGGGCAT	NA	False	NA	-9	True	NA	NA	NA	53598142	53540355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
Isoform_128864_85	chr4	-	2532	12	FSM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	-10	0	-10	0	multi-exon	FALSE	canonical	3	1320	junction_11	106.491531498949	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGAGTCTTTGTGGTC	NA	False	NA	-2	True	AATAAA	-24	NA	137523705	137469043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
Isoform_128866_39	chr4	-	2297	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	65	1	combination_of_known_splicesites	FALSE	canonical	2	49	junction_10	469.73486138459	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGAGTCTTTGTGGTCA	NA	False	NA	-1	True	AATAAA	-25	NA	137523630	137469042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137523552
Isoform_128868_104	chr4	-	2958	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	47	1	intron_retention	FALSE	canonical	3	1320	junction_10	107.525624852869	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGAGTCTTTGTGGTCA	NA	False	NA	-1	True	AATAAA	-25	NA	137523648	137469042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
Isoform_128869_10	chr4	-	2987	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	8	-9	intron_retention	FALSE	canonical	3	1320	junction_10	107.525624852869	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137523687	137469052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
Isoform_128870_4	chr4	-	879	3	FSM	ENSMUSG00000085823.8	ENSMUST00000155349.8	849	3	-30	0	-19	0	multi-exon	FALSE	canonical	2	3	junction_1	7	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTTTTGCCTTCATGT	NA	False	NA	NA	False	ATTAAA	-16	NA	137611267	137609680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_137610210_137610538_137610721_137611099
Isoform_128871_604	chr4	-	2339	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	37	-1	-30	1	multi-exon	FALSE	canonical	3	101	junction_7	15.5261464790783	604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGTACACTGGAGCC	NA	False	NA	-8	True	ATTAAA	-17	NA	138053581	138040721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
Isoform_128877_20	chr4	-	2918	2	FSM	ENSMUSG00000043621.14	ENSMUST00000105811.9	2926	2	11	-3	11	3	multi-exon	FALSE	canonical	2	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTGAAGGCGTCC	7360	False	NA	NA	False	AATAAA	-16	NA	138452565	138445845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138448690_138452491
Isoform_128879_6	chr4	-	2439	5	FSM	ENSMUSG00000028749.8	ENSMUST00000030526.7	2465	5	28	-2	28	2	multi-exon	FALSE	canonical	1	1	junction_4	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGTCCTTCTTAGGG	NA	False	NA	NA	False	AATAAA	-23	NA	138484909	138477841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138479735_138480573_138480684_138481436_138481582_138484017_138484071_138484671
Isoform_128880_3	chr4	-	1964	5	FSM	ENSMUSG00000041193.16	ENSMUST00000102512.11	1976	5	2	10	2	-5	multi-exon	FALSE	canonical	3	70	junction_2	9.4339811320566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAATTCACATGTTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	138546564	138526564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310
Isoform_128882_78	chr4	-	2116	6	FSM	ENSMUSG00000041193.16	ENSMUST00000030524.14	2131	6	9	6	9	-6	multi-exon	FALSE	canonical	3	70	junction_2	8.52291030106501	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGAATTCACATGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	138590771	138526565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480
Isoform_128883_4	chr4	-	2188	7	NNC	ENSMUSG00000041193.16	novel	2131	6	NA	NA	-85	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	32.8362942827327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGAATTCACATGTTT	NA	False	NA	-12	True	AATAAA	-17	NA	138590878	138526566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480_138590818_138590851
Isoform_128884_28	chr4	-	1688	8	FSM	ENSMUSG00000041161.9	ENSMUST00000097830.4	1668	8	-22	2	-22	-2	multi-exon	TRUE	canonical	3	21	junction_7	2.1380899352994	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTCTGTTTCTCTCTCA	NA	False	NA	-2	True	NA	NA	NA	138641278	138622691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138623226_138624026_138624209_138624867_138624965_138625317_138625450_138629162_138629286_138632467_138632581_138636792_138636942_138640920
Isoform_128886_4	chr4	-	1525	2	ISM	ENSMUSG00000028747.11	ENSMUST00000105802.8	2341	4	-37	12872	-37	-12571	5prime_fragment	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACTGGGTGACTGCCT	6920	False	NA	NA	False	AATAAA	-12	NA	138802918	138801290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_138802641_138802743
Isoform_128887_3	chr4	-	1811	4	FSM	ENSMUSG00000041120.7	ENSMUST00000042844.7	1793	4	-25	7	-25	-7	multi-exon	FALSE	canonical	2	2	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTCCTCGTGGACTGG	NA	False	NA	NA	False	AATAAA	-18	NA	138820329	138809601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138810914_138812551_138812664_138812764_138812960_138820137
Isoform_128890_850	chr4	-	511	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	69	1969	-50	8	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATGCCTTTATTCCTTT	5248	False	NA	-12	True	AATAAA	-24	NA	138858355	138831093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
Isoform_128891_9	chr4	-	2436	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	94	19	-25	-19	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGATGGAGTCCATGGAG	5273	False	NA	NA	False	AATAAA	-19	NA	138858330	138829143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
Isoform_128892_23	chr4	-	534	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	41	1974	41	3	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAGCAATGCCTTTATT	5220	False	NA	-17	True	AATAAA	-19	NA	138858383	138831098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
Isoform_128894_187	chr4	-	1498	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	37	-3	-6	3	multi-exon	FALSE	canonical	3	103	junction_8	18.155147341732	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTCTGCTGCTCCTT	NA	False	NA	0	True	AGTAAA	-18	NA	139037982	139025835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
Isoform_128899_358	chr4	-	1186	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	25	10	-18	0	multi-exon	FALSE	canonical	3	786	junction_5	119.708489460771	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGACTCTTTCTTTTTTTT	5721	False	NA	-12	True	AATAAA	-34	NA	139079862	139074755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
Isoform_128900_729	chr4	-	974	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	240	7	-25	3	multi-exon	FALSE	canonical	3	786	junction_5	119.708489460771	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTCTTTTTTTTTTT	5936	False	NA	-9	True	AATAAA	-37	NA	139079647	139074752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
Isoform_128911_122	chr4	-	1991	10	FSM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	-18	6	-18	-6	multi-exon	FALSE	canonical	3	57	junction_6	13.4421485642992	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAATGTCTGGCCCTATA	NA	False	NA	-5	True	ATTAAA	-22	NA	139974113	139754162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
Isoform_128915_3	chr4	-	2184	10	FSM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	-215	10	-215	-10	multi-exon	FALSE	canonical	3	57	junction_6	13.4421485642992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCAATGTCTGGCCC	NA	False	NA	-9	True	ATTAAA	-18	NA	139974310	139754166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
Isoform_128918_5	chr4	-	4646	29	NIC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	60.6741884400372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140376090	140241796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_128919_12	chr4	-	4516	28	NIC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	53.9528321154549	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGTGGGGTTTATGG	NA	False	NA	-4	True	AATAAA	-16	NA	140376078	140241797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_128926_54	chr4	-	4510	28	FSM	ENSMUSG00000040964.17	ENSMUST00000039204.10	4493	28	-18	1	-12	-1	multi-exon	FALSE	canonical	3	51	junction_21	42.1702734351014	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140376079	140241796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_128929_22	chr4	-	4571	28	FSM	ENSMUSG00000040964.17	ENSMUST00000039204.10	4493	28	-78	0	-72	0	multi-exon	FALSE	canonical	3	51	junction_21	42.1702734351014	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376139	140241795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_128933_106	chr4	-	4376	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	6	0	0	0	multi-exon	TRUE	canonical	3	130	junction_20	26.9722901858523	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376061	140241795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_128937_37	chr4	-	4454	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	-72	0	-72	0	multi-exon	FALSE	canonical	3	130	junction_20	26.9722901858523	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376139	140241795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_128943_9	chr4	-	3938	16	ISM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	-22	51893	-22	9048	5prime_fragment	FALSE	canonical	3	130	junction_9	26.8998141257519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	140376089	140293688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_128945_12	chr4	-	902	4	ISM	ENSMUSG00000040935.13	ENSMUST00000038749.11	2333	16	11517	1	1917	-1	intron_retention	FALSE	canonical	3	19	junction_1	1.24721912892465	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTTTACGCCGCCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	140458437	140454666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_140455121_140456177_140456340_140457019_140457091_140458222
Isoform_128951_8	chr4	-	2405	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-90	1	-90	-1	multi-exon	FALSE	canonical	3	76	junction_4	15.9114214743163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTAGTTTACCACGGA	NA	False	NA	-12	True	AATAAA	-13	NA	140501637	140473176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
Isoform_128954_13	chr4	-	2727	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-51	-360	-51	360	multi-exon	TRUE	canonical	3	76	junction_4	15.9114214743163	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGGGCTTGTGAGA	NA	False	NA	NA	False	NA	NA	NA	140501598	140472815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
Isoform_128955_4	chr4	-	893	5	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	7317	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	47.4368000607124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAGTTTACCACGGAG	NA	False	NA	-11	True	AATAAA	-14	NA	140477919	140473175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477831
Isoform_128956_4	chr4	-	1050	5	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	7345	185	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	47.4368000607124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCACGGCTGGCAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	140477891	140472990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477831
Isoform_128957_3	chr4	-	1591	11	ISM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	34	6407	34	14	5prime_fragment	FALSE	canonical	3	81	junction_9	12.9398608956974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAACACAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	140501513	140479582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
Isoform_128958_5	chr4	-	1676	10	ISM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	34	10009	34	29	5prime_fragment	FALSE	canonical	3	81	junction_8	13.5810325249756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACACGCCTTCAGATGC	NA	False	NA	NA	False	AATAAA	-21	NA	140501513	140483184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
Isoform_128959_3	chr4	-	1778	10	ISM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-68	10009	-68	29	5prime_fragment	FALSE	canonical	3	81	junction_8	13.5810325249756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACACGCCTTCAGATGC	NA	False	NA	NA	False	AATAAA	-21	NA	140501615	140483184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
Isoform_128963_45	chr4	-	3111	16	FSM	ENSMUSG00000025328.10	ENSMUST00000026377.9	3072	16	-42	3	-42	1	multi-exon	FALSE	canonical	2	14	junction_8	5.0710507348631	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGGGTGTTGGCCT	NA	False	NA	-3	True	AATAAA	-11	NA	140538001	140512678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140513946_140516147_140516274_140517023_140517104_140518473_140518577_140518668_140518814_140520288_140520441_140521147_140521256_140522923_140523036_140523123_140523228_140523647_140523827_140525359_140525486_140526215_140526334_140527391_140527454_140528855_140528929_140530777_140530959_140537826
Isoform_128964_5	chr4	-	1456	3	NNC	ENSMUSG00000025328.10	novel	3310	15	NA	NA	14863	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	15.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCCTGGGTGTTGGCC	3363	False	NA	-4	True	AATAAA	-10	NA	140516470	140512679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_140513946_140516147_140516274_140516406
Isoform_128970_5	chr4	-	6571	37	FSM	ENSMUSG00000040860.17	ENSMUST00000102491.10	6582	37	11	0	11	0	multi-exon	TRUE	canonical	2	3	junction_36	18.7163690158055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGTCCACTCAAATG	NA	False	NA	NA	False	NA	NA	NA	140781022	140743947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140780830
Isoform_128971_18	chr4	-	6515	37	NIC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_29	15.4433452846282	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGCTGTCCACTCAAA	NA	False	NA	NA	False	NA	NA	NA	140785510	140743949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372
Isoform_128972_10	chr4	-	6542	38	NIC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_37	17.566278538987	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGTCCACTCAAATG	NA	False	NA	NA	False	NA	NA	NA	140787860	140743947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787833
Isoform_128973_15	chr4	-	6647	38	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_37	17.8135379120419	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140787802	140743948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787669
Isoform_128974_4	chr4	-	6671	38	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	-1147	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_37	18.4275574119162	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGTCCACTCAAATG	NA	False	NA	NA	False	NA	NA	NA	140786657	140743947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140786501
Isoform_128979_17	chr4	-	1988	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	13	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	200.893628569947	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATCTCAGATGGATATG	8513	False	NA	-15	True	AATAAA	-17	NA	140805640	140793827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799007_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
Isoform_128980_11	chr4	-	1993	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-20	-7	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	200.893628569947	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACATCTCAGATGGATA	8528	False	NA	-17	True	AATAAA	-15	NA	140805625	140793829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799029_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
Isoform_128985_352	chr4	-	1871	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	35	0	20	0	multi-exon	TRUE	canonical	3	362	junction_3	45.6883855200484	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8520	False	NA	-10	True	AATAAA	-22	NA	140805633	140793822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
Isoform_128989_28	chr4	-	4156	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	431	junction_1	26.7810048770061	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCAGATGGATATGTTT	8528	False	NA	-12	True	AATAAA	-20	NA	140805625	140793824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_140794924_140795505_140795591_140797366_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
Isoform_128993_33	chr4	-	3226	4	FSM	ENSMUSG00000040842.18	ENSMUST00000148204.8	3202	4	-38	14	1	-14	multi-exon	FALSE	canonical	3	37	junction_2	172.554017307303	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCCTCATTTCTG	NA	False	NA	-14	True	TATAAA	-33	NA	140867076	140840325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140843176_140845837_140846090_140847634_140847685_140867002
Isoform_128995_83	chr4	-	3171	3	FSM	ENSMUSG00000040842.18	ENSMUST00000039939.7	3200	3	15	14	6	-14	multi-exon	FALSE	canonical	3	50	junction_2	204	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCCTCATTTCTG	NA	False	NA	-14	True	TATAAA	-33	NA	140867071	140840325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140843176_140845837_140846090_140867002
Isoform_129000_212	chr4	-	3230	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	0	14	0	-14	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCCTCATTTCTG	NA	False	NA	-14	True	TATAAA	-33	NA	140867077	140840325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
Isoform_129008_175	chr4	-	3173	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	16	14	7	-14	multi-exon	FALSE	canonical	3	212	junction_2	123	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCCTCATTTCTG	NA	False	NA	-14	True	TATAAA	-33	NA	140867070	140840325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_140843176_140845837_140846093_140867002
Isoform_129024_5	chr4	-	975	7	ISM	ENSMUSG00000033770.14	ENSMUST00000105790.8	2511	19	8100	0	4723	0	3prime_fragment	FALSE	canonical	3	15	junction_6	7.88810637746615	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTTCACCCATCTTC	NA	False	NA	1	True	AATAAA	-20	NA	141117415	141111920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_141112260_141112587_141112675_141114383_141114468_141114599_141114689_141115444_141115579_141116627_141116842_141117387
Isoform_129025_20	chr4	-	887	6	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7993	5	-2664	-5	3prime_fragment	FALSE	canonical	3	74	junction_3	20.1454709550311	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTAGTGTCCCCTCTC	4471	False	NA	-9	True	AATAAA	-13	NA	141135332	141131668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114
Isoform_129026_20	chr4	-	912	7	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7681	4	-2976	-4	3prime_fragment	FALSE	canonical	3	53	junction_6	23.8146780135464	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4159	False	NA	-8	True	AATAAA	-14	NA	141135644	141131667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135616
Isoform_129027_12	chr4	-	915	7	NNC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2956	-4	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_6	35.5387112878337	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4179	False	NA	-8	True	AATAAA	-14	NA	141135624	141131667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135593
Isoform_129028_3	chr4	-	1218	4	NIC	ENSMUSG00000006216.11	novel	2490	19	NA	NA	-2664	-6	intron_retention	FALSE	canonical	3	74	junction_1	21.5612821717283	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATTAGTGTCCCCTCT	4471	False	NA	-10	True	AATAAA	-12	NA	141135332	141131669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141132447_141132582_141132672_141134399_141134534_141135114
Isoform_129030_4	chr4	-	3378	2	NIC	ENSMUSG00000006216.11	novel	2490	19	NA	NA	-2958	-4	intron_retention	FALSE	canonical	3	126	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4177	False	NA	-8	True	AATAAA	-14	NA	141135626	141131667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141134534_141135114
Isoform_129031_3	chr4	-	3102	3	NNC	ENSMUSG00000006216.11	novel	2490	19	NA	NA	-2949	-6	intron_retention	FALSE	canonical	3	12	junction_2	57	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATTAGTGTCCCCTCT	4186	False	NA	-10	True	AATAAA	-12	NA	141135617	141131669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_141134534_141135114_141135329_141135593
Isoform_129032_8	chr4	-	649	2	FSM	ENSMUSG00000070637.3	ENSMUST00000094544.3	905	2	26	230	26	-230	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATGCCTCTGTCCTCTTC	NA	False	NA	1	True	ATTAAA	-24	NA	141163390	141160212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141160768_141163296
Isoform_129033_4	chr4	-	873	2	FSM	ENSMUSG00000070637.3	ENSMUST00000094544.3	905	2	26	6	26	-6	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAGCGAAGGGAGTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	141163390	141159988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141160768_141163296
Isoform_129034_4	chr4	-	729	2	NNC	ENSMUSG00000070637.3	novel	905	2	NA	NA	684	-237	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGTTATGCCTCTGT	NA	False	NA	-6	True	ATTAAA	-17	NA	141162732	141160219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_141160768_141162551
Isoform_129038_4	chr4	-	4894	5	ISM	ENSMUSG00000040761.17	ENSMUST00000078886.10	12082	15	64174	15	-2782	-15	3prime_fragment	FALSE	canonical	3	63	junction_4	11.6833214455479	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAAAACACCTCA	8778	False	NA	-42	True	NA	NA	NA	141201586	141195215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680
Isoform_12904_64	chr11	-	3143	10	FSM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	-81	0	-81	0	multi-exon	FALSE	canonical	3	28	junction_7	3.67507453523138	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTGAATACAATCTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	53782567	53755367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
Isoform_12905_6	chr11	-	3028	9	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-77	-7	combination_of_known_splicesites	FALSE	canonical	3	5	junction_8	10.2339813855606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782563	53755374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53781972
Isoform_12906_6	chr11	-	3007	9	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-107	-7	combination_of_known_splicesites	FALSE	canonical	3	3	junction_7	11.112352361224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782593	53755374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53774486_53774591_53781972
Isoform_129062_66	chr4	-	2964	9	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_8	517.29825475735	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327198	141303372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323225_141327158
Isoform_12907_10	chr11	-	2879	8	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-82	-6	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	10.8984177844347	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATACCAATTGAATACAA	NA	False	NA	NA	False	AATAAA	-17	NA	53782568	53755373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53781972
Isoform_129079_78	chr4	-	3068	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141325533	141303372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
Isoform_12908_8	chr11	-	1852	6	ISM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	-73	6420	-73	2717	5prime_fragment	FALSE	canonical	3	28	junction_3	3.37045990927054	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTCTGACTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	53782559	53761787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
Isoform_129090_2502	chr4	-	2983	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	53	0	17	0	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	2502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327182	141303372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
Isoform_129092_416	chr4	-	2379	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	1	656	1	-656	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAGCGGCGACCCAGCC	NA	False	NA	-5	True	AATAAA	-20	NA	141327234	141304028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
Isoform_129093_96	chr4	-	3060	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	-24	0	-24	0	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327259	141303372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
Isoform_12910_4	chr11	-	706	3	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	12947	2	8501	-2	3prime_fragment	FALSE	canonical	3	220	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCTAGTGTCTGGCCT	NA	False	NA	-4	True	AATAAA	-20	NA	53946893	53945755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_53946066_53946182_53946301_53946615
Isoform_129104_100	chr4	-	3005	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327302	141303372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
Isoform_12912_270	chr11	-	1177	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	4	1	4	-1	multi-exon	FALSE	canonical	3	190	junction_5	18.9245578254523	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTAGTGTCTGGCCTG	NA	False	NA	-3	True	AATAAA	-21	NA	53959836	53945754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
Isoform_129130_67	chr4	-	1464	6	FSM	ENSMUSG00000043085.15	ENSMUST00000053263.9	1671	6	206	1	-51	-1	multi-exon	FALSE	canonical	3	57	junction_2	22.4535075210979	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCGTTGAGGATCACAG	NA	False	NA	-5	True	AATAAA	-15	NA	141345343	141341544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
Isoform_129131_5	chr4	-	2354	6	FSM	ENSMUSG00000043085.15	ENSMUST00000053263.9	1671	6	177	-860	-80	3	multi-exon	FALSE	canonical	3	57	junction_2	22.4535075210979	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATTAAAAATAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	141345372	141340683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
Isoform_129132_28	chr4	-	2531	5	FSM	ENSMUSG00000043085.15	ENSMUST00000156246.2	2478	5	-51	-2	-51	2	multi-exon	FALSE	canonical	3	69	junction_2	19.536824204563	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGTTGAGGATCACA	NA	False	NA	-6	True	AATAAA	-14	NA	141345343	141341545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141342018_141342255_141343933_141344605_141344781_141344950_141345024_141345209
Isoform_129133_33	chr4	-	3179	5	NNC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-51	-1	intron_retention	TRUE	non_canonical	0	0	junction_2	45.5686295602578	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCGTTGAGGATCACAG	NA	False	NA	-5	True	AATAAA	-15	NA	141345343	141341544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_141342018_141342255_141344421_141344446_141344781_141344950_141345024_141345209
Isoform_129134_3	chr4	-	3353	4	NNC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-58	0	intron_retention	FALSE	non_canonical	0	0	junction_2	45.7456737480897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGCGTTGAGGATCA	NA	False	NA	-8	True	AATAAA	-12	NA	141345350	141341547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_141342018_141342255_141344421_141344446_141345024_141345209
Isoform_129135_5	chr4	-	3417	4	NNC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-51	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	52.6012251652838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCGTTGAGGATCACAG	NA	False	NA	-5	True	AATAAA	-15	NA	141345343	141341544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_141344421_141344446_141344781_141344950_141345024_141345209
Isoform_129136_3	chr4	-	4496	2	NIC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-70	6	intron_retention	FALSE	canonical	3	109	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATAAAAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	141345362	141340680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141345024_141345209
Isoform_129137_6	chr4	-	3610	2	NIC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-51	0	intron_retention	FALSE	canonical	3	109	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGCGTTGAGGATCA	NA	False	NA	-8	True	AATAAA	-12	NA	141345343	141341547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141345024_141345209
Isoform_129138_5	chr4	-	2680	5	FSM	ENSMUSG00000040740.8	ENSMUST00000038661.8	2670	5	-12	2	-12	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGGCAATTGCCCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	141351144	141346136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141347906_141348688_141348824_141349514_141349668_141349752_141349819_141350587
Isoform_129139_12	chr4	-	4160	20	FSM	ENSMUSG00000028917.15	ENSMUST00000084203.11	4136	20	-26	2	-26	-2	multi-exon	FALSE	canonical	2	5	junction_14	9.89893527949294	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGTCGCTGACCCTC	7285	False	NA	-3	True	AATAAA	-18	NA	141391455	141353046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141364735_141364796_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
Isoform_129140_3	chr4	-	3777	17	ISM	ENSMUSG00000028917.15	ENSMUST00000030751.5	4154	20	22315	3	178	-3	3prime_fragment	FALSE	canonical	3	20	junction_13	5.52232684201144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGTCGCTGACCCT	NA	False	NA	-4	True	AATAAA	-17	NA	141369895	141353047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716
Isoform_129141_37	chr4	-	4100	19	ISM	ENSMUSG00000028917.15	ENSMUST00000030751.5	4154	20	755	2	-26	-2	3prime_fragment	FALSE	canonical	3	16	junction_18	6.60363723196225	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGTCGCTGACCCTC	7285	False	NA	-3	True	AATAAA	-18	NA	141391455	141353046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
Isoform_129145_239	chr4	-	3540	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-2	1	-2	-1	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATTTTAGAATGAGTGA	NA	False	NA	-7	True	AATAAA	-23	NA	141450732	141410874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
Isoform_129155_17	chr4	-	6533	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-30	-2964	-30	2964	multi-exon	TRUE	canonical	3	149	junction_7	26.8842971285984	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAAGTTTCATTTTGTTT	NA	False	NA	-11	True	AATAAA	-32	NA	141450760	141407909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
Isoform_129163_10	chr4	-	5767	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	204	-2	204	2	multi-exon	TRUE	canonical	3	44	junction_12	6.2974727681274	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGGGGCACCTCTGG	NA	False	NA	-10	True	AATAAA	-17	NA	141517998	141487497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
Isoform_129164_3	chr4	-	3880	14	NIC	ENSMUSG00000040697.11	novel	5969	15	NA	NA	217	-1805	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	14.568345355274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTGCCAGGCTTCAT	NA	False	NA	NA	False	ATTAAA	-9	NA	141517985	141489304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141516199_141516385_141517900
Isoform_129165_5	chr4	-	2981	13	ISM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	204	5202	204	4685	5prime_fragment	FALSE	canonical	3	44	junction_10	6.54896090146283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAGAACACACTCTC	NA	False	NA	NA	False	NA	NA	NA	141517998	141492701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
Isoform_129166_18	chr4	-	663	3	FSM	ENSMUSG00000058579.6	ENSMUST00000127962.2	468	3	-195	0	-195	0	multi-exon	FALSE	canonical	3	93	junction_1	12.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	340	False	NA	-2	True	AATAAA	-18	NA	141546708	141542272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141542367_141545175_141545329_141546292
Isoform_129170_3	chr4	-	863	5	ISM	ENSMUSG00000058579.6	ENSMUST00000102481.4	1070	8	4124	2	-2834	-2	3prime_fragment	FALSE	canonical	3	8	junction_3	47.6622229863442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGAATGAGTCTGTC	NA	False	NA	-4	True	AATAAA	-16	NA	141549347	141542274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_141542367_141545175_141545329_141546292_141546439_141548635_141548773_141549012
Isoform_129172_899	chr4	-	2187	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	1	193	1	-193	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTGTGTGTGGTTTTTG	3877	False	NA	-3	True	GATAAA	-12	NA	141602230	141585645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
Isoform_129174_136	chr4	-	2080	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	-21	322	-21	-322	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGCATTTTATTTTT	3855	False	NA	-29	True	TATAAA	-16	NA	141602252	141585774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
Isoform_129178_52	chr4	-	2413	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	-18	-14	-18	14	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTTTGAATTCCTT	3858	False	NA	1	True	NA	NA	NA	141602249	141585438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
Isoform_12918_1160	chr11	-	3072	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	549	junction_4	66.5263857428013	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	54678504	54608281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
Isoform_129182_491	chr4	-	1804	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	71	0	71	0	multi-exon	FALSE	canonical	3	173	junction_2	4	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9871	False	NA	-6	True	AATAAA	-18	NA	141811544	141758302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141759406_141764715_141765245_141811372
Isoform_129183_25	chr4	-	2630	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	71	-826	71	826	multi-exon	FALSE	canonical	3	173	junction_2	4	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAGGAAAAAAAG	9871	False	NA	NA	False	NA	NA	NA	141811544	141757476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141759406_141764715_141765245_141811372
Isoform_129184_75	chr4	-	1837	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	38	0	38	0	multi-exon	FALSE	canonical	3	173	junction_2	4	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9838	False	NA	-6	True	AATAAA	-18	NA	141811577	141758302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141759406_141764715_141765245_141811372
Isoform_129187_8	chr4	-	2077	3	NNC	ENSMUSG00000040616.4	novel	1875	3	NA	NA	-626	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	75.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGACCTCATTCAGTC	9574	False	NA	-7	True	AATAAA	-17	NA	141812241	141758303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_141759406_141764715_141765245_141811795
Isoform_129191_46	chr4	-	1822	3	NNC	ENSMUSG00000040616.4	novel	1875	3	NA	NA	-370	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	75.5	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9830	False	NA	-6	True	AATAAA	-18	NA	141811985	141758302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_141759406_141764715_141765245_141811795
Isoform_129194_27	chr4	-	4940	15	NIC	ENSMUSG00000040606.15	novel	4898	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	104.248232011632	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTTTCTTGTTGGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	141966736	141829700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_129197_8	chr4	-	4926	15	NIC	ENSMUSG00000040606.15	novel	4898	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	103.855472574504	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTTTCTTGTTGGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	141966719	141829700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874460_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_129201_172	chr4	-	3843	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	-8	8	-8	-4	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGATGGAATTCTATG	NA	False	NA	-11	True	AATAAA	-11	NA	141966720	141866558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_129208_112	chr4	-	3844	8	NIC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	3	79	junction_3	56.4110280143223	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGATGGAATTCTAT	NA	False	NA	-12	True	AATAAA	-10	NA	141966719	141866559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141869108_141870604_141870656_141874328_141874460_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_129216_11	chr4	-	3840	8	NIC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83.791285894398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGATGGAATTCTATG	NA	False	NA	-11	True	AATAAA	-11	NA	141966722	141866558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141869108_141870604_141870656_141874333_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_129218_18	chr4	-	3800	8	NIC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	37	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83.791285894398	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATTCTATGTGATTTG	NA	False	NA	-4	True	AATAAA	-18	NA	141966675	141866551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_141869108_141870604_141870656_141874333_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_129222_4	chr4	-	5038	5	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	50597	1655	32627	-1655	3prime_fragment	FALSE	canonical	3	14	junction_1	17.2699160391705	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTCGTGCTTCTTGAG	NA	False	NA	-5	True	TTTAAA	-14	NA	142888678	142835615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142888625
Isoform_129223_3	chr4	-	5092	5	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	50542	1656	32572	-1656	3prime_fragment	FALSE	canonical	3	14	junction_1	17.2699160391705	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTTCGTGCTTCTTGA	NA	False	NA	-6	True	TTTAAA	-13	NA	142888733	142835616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142888625
Isoform_129225_6	chr4	-	4758	3	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	50557	24155	32587	-24155	internal_fragment	FALSE	canonical	3	47	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGGTACCATTTCTTT	NA	False	NA	-1	True	AATAAA	-27	NA	142888718	142858115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_142862670_142868693_142868805_142888625
Isoform_129227_3	chr4	-	9406	8	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	-6	20084	-2	-20084	5prime_fragment	FALSE	canonical	3	22	junction_5	9.80420567815628	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTGTGAAAGGACTGCA	NA	False	NA	-9	True	AATAAA	-11	NA	142939281	142854044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
Isoform_129228_3	chr4	-	5267	7	NIC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	-9	-24156	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	16.7473049241429	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGGTACCATTTCTT	NA	False	NA	-2	True	AATAAA	-26	NA	142939288	142858116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939184
Isoform_12923_37	chr11	-	2899	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	245.457735669504	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	False	NA	-13	True	AATAAA	-12	NA	54678486	54608282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54678385
Isoform_129232_517	chr4	-	1718	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	94	5	-7	-5	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGAGGCCAACATTTG	NA	False	NA	-28	True	AATAAA	-15	NA	143026040	142994005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
Isoform_129233_14	chr4	-	1811	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	2	4	2	-4	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGAGGCCAACATTTGA	NA	False	NA	-27	True	AATAAA	-16	NA	143026132	142994004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
Isoform_129239_3	chr4	-	3590	3	NNC	ENSMUSG00000078509.2	novel	1753	3	NA	NA	-3299	783	intron_retention	FALSE	canonical	3	18	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTATTTTTTTTC	NA	False	NA	-11	True	AATAAA	-13	NA	143724238	143716905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_143720077_143720652_143720966_143724132
Isoform_129241_13	chr4	-	2645	4	NIC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	4786	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	38.7843038125248	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTGGTTTTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	144130201	144118244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_144119688_144121144_144121730_144122249_144122573_144129907
Isoform_129242_18	chr4	-	2543	5	NIC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	43.6369969177532	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTGGTTTTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	144135005	144118244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_144119688_144121144_144121730_144122249_144122573_144129907_144130021_144134926
Isoform_129246_181	chr4	-	2419	4	FSM	ENSMUSG00000028591.12	ENSMUST00000030326.10	2460	4	40	1	-7	-1	multi-exon	FALSE	canonical	3	80	junction_3	9.80929264637478	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTGGTTTTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	144134994	144118244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_144119688_144121144_144121730_144122249_144122573_144134926
Isoform_129247_3	chr4	-	2693	16	ISM	ENSMUSG00000020220.17	ENSMUST00000185113.2	10176	52	83002	200	118	130	3prime_fragment	FALSE	canonical	3	12	junction_15	8.88194172964949	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGGCTGTGCTGTTGTG	NA	False	NA	-6	True	AATACA	-13	NA	144799054	144701365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955
Isoform_129248_3	chr4	-	2903	17	ISM	ENSMUSG00000020220.17	ENSMUST00000185113.2	10176	52	80457	194	-2427	136	3prime_fragment	FALSE	canonical	3	12	junction_15	8.95627398810465	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTGTTGTGAAGGTT	NA	False	NA	0	True	AATACA	-19	NA	144801599	144701359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405
Isoform_129250_175	chr4	-	3790	11	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.4466780644462	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTATCTGTTTGTT	7834	False	NA	NA	False	AATAAA	-38	NA	144973438	144940032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_144940550_144940575_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
Isoform_129251_5	chr4	-	4883	11	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	0	1097	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.4466780644462	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGTGGTAAACGTCTT	7832	False	NA	NA	False	AATAAA	-38	NA	144973440	144938935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_144940551_144940582_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
Isoform_129253_3	chr4	-	3723	11	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.7074895862565	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTATCTGTTTGTT	7832	False	NA	NA	False	AATAAA	-38	NA	144973440	144940032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_144940550_144940573_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955644_144955677_144973293
Isoform_129254_4	chr4	-	3699	10	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.7848879788996	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGCTTATCTGTTTG	10005	False	NA	NA	False	AATAAA	-36	NA	144973458	144940034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_144940551_144940582_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144973293
Isoform_129255_3	chr4	-	3547	9	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.6834865708191	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGCTTATCTGTTT	7834	False	NA	NA	False	AATAAA	-35	NA	144973438	144940035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_144940551_144940584_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144973293
Isoform_129257_13	chr4	-	3416	13	FSM	ENSMUSG00000028602.13	ENSMUST00000030339.13	3414	13	-1	-1	-1	1	multi-exon	FALSE	canonical	2	5	junction_11	3.685557397916	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTTTGGTATTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	145041718	144993705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145041591
Isoform_129259_3	chr4	-	3512	13	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	9413	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.81028989655394	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGGTATTTGTAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	145032304	144993701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145032085
Isoform_129261_4	chr4	-	694	4	FSM	ENSMUSG00000045699.5	ENSMUST00000238583.2	1296	4	-63	665	0	45	multi-exon	FALSE	canonical	3	153	junction_2	62.9938268580519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAACACAACCGAA	NA	False	NA	43	True	NA	NA	NA	146994047	146976817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_146977116_146978205_146978333_146982168_146982273_146993882
Isoform_129268_145	chr4	-	2591	5	FSM	ENSMUSG00000066000.13	ENSMUST00000105720.8	2594	5	2	1	2	-1	multi-exon	FALSE	canonical	3	24	junction_4	194.219592214586	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGACTTGCTTGTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	147726968	147696394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791
Isoform_129269_101	chr4	-	2619	5	FSM	ENSMUSG00000066000.13	ENSMUST00000105720.8	2594	5	-27	2	-27	0	multi-exon	FALSE	canonical	3	24	junction_4	194.219592214586	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726997	147696395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791
Isoform_129270_358	chr4	-	2562	5	FSM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	-3	-1	2	-1	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGACTTGCTTGTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	147726968	147696394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
Isoform_129277_12	chr4	-	2692	6	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	226.990748710162	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726969	147696393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147706414_147706543_147725368_147725463_147726820
Isoform_12928_5	chr11	-	1653	5	NIC	ENSMUSG00000020268.15	novel	3431	5	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	62.9503772824278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACAGAGAAGTGATTTC	NA	False	NA	-6	True	AATAAA	-23	NA	54751421	54730642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_54732029_54739404_54739487_54741170_54741239_54744052_54744126_54751377
Isoform_129281_3	chr4	-	846	4	FSM	ENSMUSG00000062518.8	ENSMUST00000117638.2	2885	4	-46	2085	-46	-2085	multi-exon	FALSE	canonical	3	115	junction_2	89.2238134630486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCTTACGAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	147787056	147760043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147760511_147762673_147762801_147766723_147766828_147786908
Isoform_129292_7	chr4	-	398	4	FSM	ENSMUSG00000059423.14	ENSMUST00000105718.8	4238	4	-52	3892	-52	-131	multi-exon	FALSE	canonical	3	42	junction_2	6.37704215656966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTATCCTCAGTGGCATG	3889	False	NA	NA	False	NA	NA	NA	147932875	147911334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147911404_147912866_147912928_147913126_147913254_147932734
Isoform_129293_3	chr4	-	518	4	FSM	ENSMUSG00000059423.14	ENSMUST00000105718.8	4238	4	-50	3770	-50	-9	multi-exon	FALSE	canonical	3	42	junction_2	6.37704215656966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCTTATGAATGTAAT	3891	False	NA	NA	False	NA	NA	NA	147932873	147911212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147911404_147912866_147912928_147913126_147913254_147932734
Isoform_129294_21	chr4	-	1530	10	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	73.7735942588982	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952978	147945247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_129297_6	chr4	-	2151	11	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_10	97.9021960938569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952955	147945247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952525
Isoform_129299_15	chr4	-	1855	11	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	96.0689856301189	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952959	147945247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952825
Isoform_129300_340	chr4	-	1603	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	197	13	1	0	multi-exon	FALSE	canonical	3	210	junction_4	26.1538657058192	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952979	147945247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_129301_7	chr4	-	1692	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	108	13	55	0	multi-exon	FALSE	canonical	3	210	junction_4	26.1538657058192	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147953068	147945247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_129305_75	chr4	-	1908	9	FSM	ENSMUSG00000029022.19	ENSMUST00000156374.9	1909	9	1	0	1	0	multi-exon	FALSE	canonical	3	219	junction_8	23.8995292840675	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952955	147945247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_129306_18	chr4	-	1822	8	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	19	junction_4	85.7195236494807	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952978	147945247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_129308_32	chr4	-	2010	8	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	219	junction_7	24.6915667665654	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952979	147945247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_12931_47	chr11	-	1664	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	318	1449	-6	5	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGATTTCCTGTTTATT	NA	False	NA	3	True	AATAAA	-32	NA	54751420	54730633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
Isoform_129315_134	chr4	-	4252	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-11	0	0	0	multi-exon	TRUE	canonical	2	51	junction_4	9.87139526330723	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989155	147958055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
Isoform_129316_44	chr4	-	4424	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-183	0	-166	0	multi-exon	FALSE	canonical	2	51	junction_4	9.87139526330723	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989327	147958055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
Isoform_129318_7	chr4	-	2785	17	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	4896	308	4837	-308	3prime_fragment	FALSE	canonical	3	68	junction_3	13.0144150848204	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATGAGAGATGCCTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	148016328	147994517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083
Isoform_129321_87	chr4	-	2908	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	28	307	3	-307	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGAGATGCCTGGGG	NA	False	NA	-3	True	ATTAAA	-16	NA	148021196	147994516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
Isoform_129323_5	chr4	-	3199	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	43	1	1	-1	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCGGTCTGGTTATACTT	NA	False	NA	NA	False	AATAAA	-38	NA	148021181	147994210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
Isoform_129324_6	chr4	-	4960	22	NIC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	17	-3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	32.5614019655049	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTTGTCTCCACGGT	7439	False	NA	-4	True	AATAAA	-19	NA	148123253	148088718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
Isoform_129333_143	chr4	-	5160	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	20	-1874	20	-1	multi-exon	FALSE	canonical	3	89	junction_12	12.7042811811837	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7442	False	NA	-2	True	AATAAA	-21	NA	148123250	148088716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
Isoform_129336_11	chr4	-	5012	22	NIC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	25.583795892027	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7424	False	NA	-1	True	AATAAA	-22	NA	148123268	148088715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
Isoform_129339_76	chr4	-	3456	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	31	509	31	-509	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTACCCTGAGATTTCTG	NA	False	NA	-11	True	AATAAA	-15	NA	148172457	148162026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_12934_20	chr11	-	3113	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	325	-7	1	7	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTGAGAGTCAAATTG	NA	False	NA	NA	False	NA	NA	NA	54751413	54729177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
Isoform_129340_42	chr4	-	3964	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	31	1	31	-1	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTGCTGTGTGATTAA	NA	False	NA	-4	True	AATAAA	-17	NA	148172457	148161518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_129341_454	chr4	-	1115	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	31	2850	31	606	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTTGGTATGATTTT	NA	False	NA	-15	True	NA	NA	NA	148172457	148164367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_129342_69	chr4	-	1164	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	-17	2849	-17	607	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTTGGTATGATTTTT	NA	False	NA	-14	True	NA	NA	NA	148172505	148164366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_129348_74	chr4	-	808	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	-20	3208	-20	248	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGTGGTTGGTTTTTTC	NA	False	NA	-2	True	NA	NA	NA	148172508	148164725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_129354_37	chr4	-	1331	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	49	603	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_4	478.358913369449	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGTCTTGGTATGAT	NA	False	NA	-18	True	NA	NA	NA	148172439	148164370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172136
Isoform_129360_13	chr4	-	1118	5	FSM	ENSMUSG00000055401.15	ENSMUST00000126615.8	794	5	-19	-305	-19	0	multi-exon	FALSE	canonical	3	782	junction_1	8.18535277187245	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148234195	148230243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835
Isoform_129364_22	chr4	-	1348	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	-3	1	-3	0	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236373	148230244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
Isoform_129365_85	chr4	-	1153	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	193	0	-74	0	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236177	148230243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
Isoform_129369_224	chr4	-	1184	6	FSM	ENSMUSG00000055401.15	ENSMUST00000134261.2	811	6	-42	-331	-42	0	multi-exon	FALSE	canonical	3	174	junction_5	248.50786707869	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236424	148230243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236286
Isoform_129372_97	chr4	-	1101	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	63	-1	63	0	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236453	148230243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
Isoform_129373_22	chr4	-	1241	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	-80	2	1	-2	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGTTTGAGGGCTT	NA	False	NA	-20	True	AATAAA	-14	NA	148236596	148230246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
Isoform_129376_376	chr4	-	1165	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	4	71	4	0	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236588	148230243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
Isoform_129377_20	chr4	-	1236	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	3	1	3	-1	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATGTTCATCCTGTTT	NA	False	NA	53	True	NA	NA	NA	148236589	148230173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
Isoform_129378_51	chr4	-	1067	6	NNC	ENSMUSG00000055401.15	novel	1346	6	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_5	294.890895078163	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236572	148230243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236551
Isoform_129381_3	chr4	-	1714	7	NIC	ENSMUSG00000029001.16	novel	1633	7	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	18.9362967164473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244339	148237257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_148238102_148238614_148238699_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
Isoform_129383_21	chr4	-	1652	6	FSM	ENSMUSG00000029001.16	ENSMUST00000057907.10	1829	6	179	-2	-27	-1	multi-exon	FALSE	canonical	3	37	junction_4	3.00665927567458	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244361	148237257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
Isoform_129384_9	chr4	-	1532	5	FSM	ENSMUSG00000029001.16	ENSMUST00000105705.9	1034	5	-34	-464	-34	0	multi-exon	FALSE	canonical	2	6	junction_2	15.4979837398289	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCCCTGCGGCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	148244368	148237259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148238102_148240602_148240739_148241065_148241164_148242993_148243281_148244199
Isoform_129385_461	chr4	-	2971	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	21	0	11	0	multi-exon	FALSE	canonical	3	93	junction_1	0	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529207	148518951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148521100_148528384
Isoform_129389_22	chr4	-	2559	3	FSM	ENSMUSG00000047719.3	ENSMUST00000156686.2	576	3	11	-1994	11	0	multi-exon	FALSE	canonical	2	6	junction_2	43.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529207	148518951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148521100_148528384_148528587_148528998
Isoform_129399_123	chr4	-	1209	8	FSM	ENSMUSG00000041459.16	ENSMUST00000045180.14	2006	8	1	796	1	1	multi-exon	FALSE	canonical	3	205	junction_2	361.175800938647	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATTCATCACCTGTCA	NA	False	NA	-1	True	AATAAA	-27	NA	148711221	148701171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129401_122	chr4	-	1200	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATTCATCACCTGTCA	NA	False	NA	-1	True	AATAAA	-27	NA	148711221	148701171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129404_142	chr4	-	2164	7	NIC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	1	2	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATGGATTCATCACCT	NA	False	NA	-5	True	AATAAA	-23	NA	148711221	148701175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129413_33	chr4	-	1775	7	FSM	ENSMUSG00000041459.16	ENSMUST00000165113.8	6495	7	232	4488	1	-7	multi-exon	FALSE	canonical	3	205	junction_1	333.080404040159	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATATGTGTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	148711221	148701326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129416_25	chr4	-	1766	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	-6	144	1	-7	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATATGTGTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	148711221	148701326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129419_22	chr4	-	1894	7	NIC	ENSMUSG00000041459.16	novel	6495	7	NA	NA	1	-8	intron_retention	FALSE	canonical	3	28	junction_1	398.788756388921	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711221	148701327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_148702283_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129431_805	chr4	-	2734	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	255	4488	1	-7	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATATGTGTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	148711221	148701326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129432_42	chr4	-	2888	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	255	4334	1	0	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTCATCACCTGTC	NA	False	NA	-2	True	AATAAA	-26	NA	148711221	148701172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129433_39	chr4	-	4135	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	255	3087	1	-3	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTAGTGTCTGGAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	148711221	148699925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129437_18	chr4	-	7217	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	255	5	1	0	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTAGTAGTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	148711221	148696843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129438_18	chr4	-	3051	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	-63	4489	-63	-8	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711539	148701327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_129440_553	chr4	-	1946	9	FSM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	58	2	-2	-2	multi-exon	FALSE	canonical	3	391	junction_6	18.1757909043871	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGCTCTGACCTCG	NA	False	NA	-14	True	AATAAA	-18	NA	149184275	149044993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
Isoform_129442_12	chr4	-	1860	8	NIC	ENSMUSG00000028975.17	novel	2006	9	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	146.864785793336	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGCTCTGACCTCG	NA	False	NA	-14	True	AATAAA	-18	NA	149184275	149044993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149068493_149068623_149126177_149126263_149160476_149160525_149184228
Isoform_129444_7	chr4	-	1837	3	ISM	ENSMUSG00000028975.17	ENSMUST00000148203.2	514	4	8	25680	-4	-25680	5prime_fragment	FALSE	canonical	3	405	junction_2	15.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	149184277	149124522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_149126263_149160476_149160525_149184228
Isoform_129447_4	chr4	-	4029	5	FSM	ENSMUSG00000028971.5_ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	86	-3005	5	-159	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGAGCTTTCTTCTTAT	NA	False	NA	-6	True	AATAAA	-13	NA	149222000	149209649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
Isoform_129448_29	chr4	-	903	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	58	149	-2	-149	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGTGGCTTCAG	NA	False	NA	49	True	AATAAA	-20	NA	149222028	149212803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
Isoform_129449_240	chr4	-	830	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	48	232	-4	110	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGCTGTGGCTTCA	NA	False	NA	-34	True	AATAAA	-19	NA	149222038	149212886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
Isoform_129451_5	chr4	-	877	5	FSM	ENSMUSG00000073705.11	ENSMUST00000176124.8	518	5	-16	-343	-4	107	multi-exon	FALSE	canonical	3	8	junction_4	158.113883008419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCAGCTGCTGTGGCT	NA	False	NA	-37	True	AATAAA	-16	NA	149222038	149212889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216890_149221932
Isoform_129452_8	chr4	-	812	5	FSM	ENSMUSG00000073705.11	ENSMUST00000177408.2	689	5	-13	-110	-5	110	multi-exon	FALSE	canonical	3	47	junction_3	159.066809863026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGCTGTGGCTTCA	NA	False	NA	-34	True	AATAAA	-19	NA	149222039	149212886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216734_149216840_149221932
Isoform_129457_21	chr4	-	1542	8	NNC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	1923	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	129.739141734325	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	4788	False	NA	-10	True	AATAAA	-14	NA	149242533	149234449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_149234909_149234931_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417
Isoform_129464_349	chr4	-	2196	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	20	2	20	-2	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	149251144	149234449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
Isoform_129465_1310	chr4	-	2173	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	42	3	-5	-3	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTCTTTGTTTCTTC	NA	False	NA	-11	True	AATAAA	-13	NA	149251122	149234450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
Isoform_129472_32	chr4	-	9884	46	NIC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-39	-2	combination_of_known_splicesites	FALSE	canonical	3	47	junction_22	22.5611268434102	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCGTGCTTTAGTCT	7200	False	NA	-4	True	AATAAA	-19	NA	149392189	149260777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
Isoform_129474_4	chr4	-	5521	46	NIC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-70	-479	combination_of_known_splicesites	FALSE	canonical	3	47	junction_22	22.5611268434102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTTTGTGATTCTTGA	7169	False	NA	NA	False	GATAAA	-17	NA	149392220	149265171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
Isoform_129477_43	chr4	-	7100	21	FSM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	-109	0	-39	0	multi-exon	FALSE	canonical	3	40	junction_1	18.6480561989715	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCATGATCTTTAAG	7200	False	NA	NA	False	AATAAA	-16	NA	149392189	149318190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
Isoform_12948_416	chr11	-	2699	18	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	3	179	junction_17	40.9030417393305	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	3640	False	NA	-6	True	CATAAA	-17	NA	54846890	54801613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
Isoform_129494_316	chr4	-	5490	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	132	4	14	2	multi-exon	TRUE	canonical	3	203	junction_22	27.7325828917206	316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCTCCTGTGAGTCGT	NA	False	NA	-6	True	AATAAA	-19	NA	149511074	149412876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
Isoform_129508_50	chr4	-	2217	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	9	-988	9	1	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACGACTACCCTCTG	1661	False	NA	-6	True	AATAAA	-18	NA	149569646	149552027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
Isoform_12951_30	chr11	-	2734	18	NIC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	69.342188459451	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	6846	False	NA	-6	True	CATAAA	-17	NA	54853737	54801613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
Isoform_129510_19	chr4	-	1105	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	-20	153	-16	-113	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAAAGGTTCGATTTAA	1632	False	NA	-119	True	NA	NA	NA	149569675	149553168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
Isoform_129512_14	chr4	-	2624	4	FSM	ENSMUSG00000028992.14	ENSMUST00000119921.8	2657	4	34	-1	4	1	multi-exon	FALSE	canonical	3	41	junction_1	4.98887651569859	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACGACTACCCTCTG	1682	False	NA	-6	True	AATAAA	-18	NA	149569625	149552027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149554240_149557741_149557926_149558884_149559053_149569565
Isoform_129515_3	chr4	-	4488	22	NNC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	2951	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	5.86816616581874	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTTGGCTCAAATAACA	4668	False	NA	-1	True	AATAAA	-19	NA	149744790	149733625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149744767
Isoform_129516_14	chr4	-	4935	24	NIC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_23	5.23547590382274	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTTGGCTCAAATAACA	NA	False	NA	-1	True	AATAAA	-19	NA	149760546	149733625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149760368
Isoform_129518_5	chr4	-	4808	24	NIC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_23	5.81211823146122	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	NA	False	NA	-2	True	AATAAA	-18	NA	149783063	149733626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149783011
Isoform_129528_632	chr4	-	3683	11	FSM	ENSMUSG00000044700.16	ENSMUST00000105687.9	3697	11	6	8	6	0	multi-exon	FALSE	canonical	3	194	junction_3	67.7469556511582	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTATCAGGCTGTGTT	NA	False	NA	-9	True	AATAAA	-17	NA	149822495	149799839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
Isoform_129529_97	chr4	-	3707	11	FSM	ENSMUSG00000044700.16	ENSMUST00000105687.9	3697	11	-16	6	-16	2	multi-exon	FALSE	canonical	3	194	junction_3	67.7469556511582	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATCAGGCTGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	149822517	149799837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
Isoform_129535_41	chr4	-	4629	10	FSM	ENSMUSG00000044700.16	ENSMUST00000054459.11	4631	10	4	-2	4	2	multi-exon	FALSE	canonical	3	194	junction_2	68.5966921421107	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATCAGGCTGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	149822497	149799837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
Isoform_129540_85	chr4	-	3620	6	FSM	ENSMUSG00000044700.16	ENSMUST00000103208.2	3620	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_5	21.9508541975022	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCGTCTTTTTTTCTTTC	NA	False	NA	-8	True	AATAAA	-39	NA	149822501	149809320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
Isoform_129541_285	chr4	-	3594	6	FSM	ENSMUSG00000044700.16	ENSMUST00000103208.2	3620	6	27	-1	-19	1	multi-exon	FALSE	canonical	3	307	junction_5	21.9508541975022	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGTCTTTTTTTCTTTCA	NA	False	NA	-7	True	AATAAA	-40	NA	149822474	149809319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
Isoform_129542_84	chr4	-	1877	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	11	-1	11	1	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATTTTCCTGCATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	149858723	149828491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
Isoform_129543_23	chr4	-	1902	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	-16	1	-16	-1	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTTTCCTGCATT	NA	False	NA	NA	False	AATAAA	-19	NA	149858750	149828493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
Isoform_129544_507	chr4	-	1439	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	11	437	11	-437	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCGTGCTGGGCTGTGTT	NA	False	NA	-4	True	ATTAAA	-18	NA	149858723	149828929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
Isoform_129546_126	chr4	-	1466	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	-16	437	-16	-437	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCGTGCTGGGCTGTGTT	NA	False	NA	-4	True	ATTAAA	-18	NA	149858750	149828929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
Isoform_12955_289	chr11	-	2558	17	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	54.30350903717	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATTTTGTGACTGGCT	3606	False	NA	-9	True	CATAAA	-14	NA	54846924	54801616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
Isoform_129554_239	chr4	-	3083	3	FSM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	7	2	-5	-2	multi-exon	FALSE	canonical	3	59	junction_1	6.5	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATCCGAGTCCTTTCGT	NA	False	NA	1	True	AATAAA	-22	NA	150039493	149980741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_149982799_149990872_149991715_150039309
Isoform_129559_4	chr4	-	3923	5	Fusion	ENSMUSG00000039911.14_ENSMUSG00000028980.15	novel	3092	3	NA	NA	1	-5	multi-exon	FALSE	canonical	0	0	junction_2	27.5726313579245	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCATCCGAGTCCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	150093479	149980744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_-_149982799_149990872_149991715_150078925_150079044_150080201_150080839_150093207
Isoform_12956_41	chr11	-	2562	17	NIC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	68.3266225109218	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	6846	False	NA	-6	True	CATAAA	-17	NA	54853737	54801613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
Isoform_129562_10	chr4	-	3964	4	ISM	ENSMUSG00000028980.15	ENSMUST00000084117.13	4571	5	7288	-31	5423	31	3prime_fragment	FALSE	canonical	3	55	junction_3	8.5764535535124	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCCAGCCTCCTGCC	NA	False	NA	31	True	GATAAA	-17	NA	150080299	150063900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201
Isoform_129564_151	chr4	-	4755	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	-11	1	-11	-1	multi-exon	FALSE	canonical	3	55	junction_3	7.96868872525461	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGAGTTGATAAACAGT	NA	False	NA	-1	True	ATTAAA	-25	NA	150093491	150063932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
Isoform_129569_19	chr4	-	4790	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	-53	8	-53	-8	multi-exon	FALSE	canonical	3	55	junction_3	7.96868872525461	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTTAACATTGAGTTGAT	NA	False	NA	-8	True	ATTAAA	-18	NA	150093533	150063939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
Isoform_12957_22	chr11	-	2744	17	NIC	ENSMUSG00000020400.18	novel	2686	18	NA	NA	-177	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	68.3266225109218	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	6663	False	NA	-7	True	CATAAA	-16	NA	54853920	54801614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
Isoform_129570_8	chr4	-	1304	2	ISM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	-2	15878	-2	495	5prime_fragment	FALSE	canonical	3	72	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTGTCTTGAGGCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	150093482	150079809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_150080839_150093207
Isoform_129571_5	chr4	-	1530	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	-75	5	-75	-5	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTTGTGTTACTATT	NA	False	NA	-3	True	AATAAA	-23	NA	150283002	150271476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
Isoform_129572_17	chr4	-	1473	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	-16	3	-16	-3	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTTACTATTCT	NA	False	NA	-1	True	AATAAA	-25	NA	150282943	150271474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
Isoform_129574_4	chr4	-	1632	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	-174	2	-174	-2	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTTACTATTCTT	NA	False	NA	0	True	AATAAA	-26	NA	150283101	150271473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
Isoform_129575_3	chr4	-	2483	8	ISM	ENSMUSG00000039838.12	ENSMUST00000037827.10	3387	9	7736	826	-349	649	3prime_fragment	FALSE	canonical	0	0	junction_5	1.29362644830535	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAGGGTTCGAGGTCA	NA	False	NA	NA	False	AATAAA	-16	NA	150728895	150713854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_150714255_150715374_150715581_150717769_150717947_150719343_150719498_150722430_150723168_150726902_150727128_150727745_150727839_150728404
Isoform_129585_3467	chr4	-	833	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	75	0	17	0	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	3467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994308	150981589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
Isoform_129586_330	chr4	-	861	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	47	0	-11	0	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994336	150981589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
Isoform_129601_3	chr4	-	2165	12	FSM	ENSMUSG00000028957.13	ENSMUST00000128283.2	2139	12	-21	-5	-21	5	multi-exon	FALSE	canonical	0	0	junction_1	1.23315090602278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTAGTCTGTTTCCT	300	False	NA	NA	False	AATAAA	-23	NA	151129143	151108641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_151108997_151109528_151109658_151110569_151110676_151113205_151113363_151113592_151113700_151116369_151116449_151118313_151118454_151122345_151122395_151125728_151125931_151127132_151127249_151128015_151128162_151128564
Isoform_129604_524	chr4	-	2102	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	14	4	7	-4	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	524	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCGTGTTTCTTGG	NA	False	NA	-1	True	AATAAA	-18	NA	151142396	151131760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
Isoform_129610_3	chr4	-	3383	13	NIC	ENSMUSG00000014592.22	novel	4962	14	NA	NA	10	-1589	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.16624148553054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGGCAGAGTAGCATTA	NA	False	NA	NA	False	AATAAA	-28	NA	151193023	151145859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151161033_151161055_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
Isoform_129611_6	chr4	-	5232	13	NIC	ENSMUSG00000014592.22	novel	4962	14	NA	NA	40	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.16624148553054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGTGTTTTGCTTTA	NA	False	NA	-1	True	ATTAAA	-21	NA	151192993	151143980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151161033_151161055_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
Isoform_129619_7	chr4	-	5535	12	NIC	ENSMUSG00000014592.22	novel	4961	12	NA	NA	51	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	5.03541179059136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATATTATCTGTGTTTTGC	NA	False	NA	-5	True	ATTAAA	-17	NA	151192982	151143984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
Isoform_129620_11	chr4	-	3381	9	ISM	ENSMUSG00000014592.22	ENSMUST00000049790.14	8423	24	1	83543	1	-56945	5prime_fragment	FALSE	canonical	1	4	junction_3	423.724483007532	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATCCCCTGAGTGCCTT	NA	False	NA	NA	False	AATAAA	-33	NA	151946202	151227525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_151230026_151232866_151233008_151248272_151248427_151374488_151374561_151537740_151537877_151670871_151670940_151914874_151914994_151920270_151920341_151946081
Isoform_129621_5	chr4	-	3311	8	NIC	ENSMUSG00000014592.22	novel	8533	23	NA	NA	1	-56945	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	19.8669040756485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATCCCCTGAGTGCCTT	NA	False	NA	NA	False	AATAAA	-33	NA	151946202	151227525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_151230026_151232866_151233008_151248272_151248427_151374488_151374561_151537740_151537877_151670871_151670940_151914874_151914994_151946081
Isoform_129622_4	chr4	-	3315	8	NIC	ENSMUSG00000014592.22	novel	8533	23	NA	NA	-3	-56943	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	442.148926798865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCCCTGAGTGCCTTGC	NA	False	NA	NA	False	AATAAA	-35	NA	151946206	151227523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_151230026_151232866_151233008_151248272_151248427_151537740_151537877_151670871_151670940_151914874_151914994_151920270_151920341_151946081
Isoform_129623_8	chr4	-	2220	6	FSM	ENSMUSG00000014592.22	ENSMUST00000153938.3	2178	6	-41	-1	1	1	multi-exon	FALSE	canonical	1	1	junction_1	486.741574143816	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGGGCCACTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	151946202	151864908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_151866589_151874864_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
Isoform_129624_16	chr4	-	2342	6	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	485.492492217954	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTGGGCCACTAGTGT	NA	False	NA	NA	False	NA	NA	NA	151946202	151864909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_151866589_151874741_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
Isoform_129628_292	chr4	-	600	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-41	1639	1	17	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAGTTTAATGAGTA	NA	False	NA	-6	True	AATAAA	-27	NA	151946202	151876669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
Isoform_129631_7	chr4	-	1210	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-42	1030	0	626	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACACCACTCCCTAGA	NA	False	NA	NA	False	AATAAA	-28	NA	151946203	151876060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
Isoform_129632_7	chr4	-	1031	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-30	1197	4	459	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAATGTTTTTTGTCTT	NA	False	NA	NA	False	CATAAA	-22	NA	151946191	151876227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
Isoform_129633_15	chr4	-	526	3	FSM	ENSMUSG00000014592.22	ENSMUST00000135780.2	506	3	4	-24	4	24	multi-exon	FALSE	canonical	3	63	junction_2	493.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAATGAGTACATTTCC	NA	False	NA	1	True	AATAAA	-34	NA	151946191	151876662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_151876960_151914874_151914994_151946081
Isoform_129634_91	chr4	-	1106	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	19	-1	2	1	multi-exon	FALSE	canonical	3	153	junction_2	10.8730042868667	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTGTCACTCGGTTA	NA	False	NA	-2	True	AATAAA	-17	NA	152073435	152067094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
Isoform_129636_31	chr4	-	1004	3	FSM	ENSMUSG00000039759.11	ENSMUST00000105665.3	832	3	-10	-162	0	-1	multi-exon	FALSE	canonical	3	60	junction_1	59.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGCTGTCACTCGGT	NA	False	NA	-4	True	AATAAA	-15	NA	152073437	152067096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_152067810_152070125_152070319_152073339
Isoform_129637_18	chr4	-	513	2	FSM	ENSMUSG00000039759.11	ENSMUST00000146471.2	501	2	0	-12	0	12	multi-exon	FALSE	canonical	3	179	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAACCCCAAA	NA	False	NA	NA	False	NA	NA	NA	152073437	152069903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_152070319_152073339
Isoform_12964_253	chr11	-	2800	18	FSM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	31	3	-4	-1	multi-exon	FALSE	canonical	3	102	junction_1	53.1161161918674	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	3613	False	NA	-6	True	CATAAA	-17	NA	54846917	54801613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
Isoform_129641_777	chr4	-	3167	4	FSM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	40	-2	40	2	multi-exon	FALSE	canonical	3	138	junction_1	6.59966329107444	777	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGCCTCCTTAGGTG	NA	False	NA	-3	True	AATAAA	-17	NA	152080675	152074087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_152076237_152076526_152077050_152078446_152078549_152080282
Isoform_129647_94	chr4	-	2223	11	FSM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	-8	3	2	-1	multi-exon	FALSE	canonical	3	24	junction_10	11.2782977438973	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCAGTGTCTGTTCCT	8671	False	NA	-4	True	AATAAA	-15	NA	152112126	152104233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
Isoform_129649_12	chr4	-	2201	11	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	2	-1	intron_retention	FALSE	canonical	2	3	junction_10	15.9715371833772	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCAGTGTCTGTTCCT	8671	False	NA	-4	True	AATAAA	-15	NA	152112126	152104233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152112021
Isoform_12965_26	chr11	-	2827	18	FSM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	4	3	4	-1	multi-exon	FALSE	canonical	3	102	junction_1	53.1161161918674	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	3586	False	NA	-6	True	CATAAA	-17	NA	54846944	54801613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
Isoform_129650_11	chr4	-	2149	11	NNC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	-49	1	intron_retention	FALSE	canonical	2	3	junction_10	15.9715371833772	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTGTCTGTTCCTTGGT	8620	False	NA	0	True	AATAAA	-19	NA	152112177	152104229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152112128
Isoform_129652_7	chr4	-	2340	11	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	16	junction_7	13.8506317545446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTGTCTGTTCCTTG	8671	False	NA	-2	True	AATAAA	-17	NA	152112126	152104231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106692_152107152_152107265_152110234_152110477_152110844_152111517_152111999
Isoform_129654_5	chr4	-	2397	10	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	3	-1	intron_retention	FALSE	canonical	3	16	junction_6	14.204850501775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCAGTGTCTGTTCCT	8682	False	NA	-4	True	AATAAA	-15	NA	152112115	152104233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_152104578_152104646_152104736_152105000_152105373_152105745_152105901_152105998_152106086_152106483_152106692_152107152_152107265_152110234_152110477_152110844_152111517_152111999
Isoform_129657_3	chr4	-	2078	4	ISM	ENSMUSG00000028950.4	ENSMUST00000030792.2	2863	6	5990	6	5990	-6	3prime_fragment	FALSE	canonical	0	0	junction_2	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGTGTGTGTGGCTTCT	8961	False	NA	-6	True	AATAAA	-8	NA	152117035	152112376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_152113455_152115240_152115362_152115777_152115991_152116369
Isoform_129658_9	chr4	-	3011	15	NIC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	4.85293935756086	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	152236846	152205337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_152205723_152208073_152208086_152208170_152208251_152212525_152212790_152212864_152213011_152215225_152215419_152215508_152215752_152217380_152217414_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
Isoform_129660_4	chr4	-	2534	10	NIC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	4.36597393430856	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGTTGAGATTCTGCAT	NA	False	NA	-1	True	NA	NA	NA	152236846	152212249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_152212790_152212864_152213011_152215225_152215419_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
Isoform_129661_5	chr4	-	1999	4	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	15	-5	intron_retention	FALSE	canonical	3	14	junction_3	6.18241233033047	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAGAGTACAGTGA	NA	False	NA	NA	False	AATAAA	-13	NA	152397790	152391480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_152392074_152393294_152393361_152395840_152397034_152397643
Isoform_129663_8	chr4	-	3597	16	FSM	ENSMUSG00000028931.13	ENSMUST00000160884.9	3961	16	364	0	-2	0	multi-exon	TRUE	canonical	1	3	junction_13	3.63684845252956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTGATCTCTCCTTTC	NA	False	NA	-4	True	AATAAA	-22	NA	152562003	152475200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152519238_152519281_152520261_152520395_152561857
Isoform_129664_4	chr4	-	3589	15	FSM	ENSMUSG00000028931.13	ENSMUST00000159840.8	3574	15	-17	2	-1	0	multi-exon	TRUE	canonical	1	4	junction_13	3.78773530958939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTGATCTCTCCTTTC	NA	False	NA	-4	True	AATAAA	-22	NA	152533314	152475200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152520261_152520395_152533134
Isoform_129665_11	chr4	-	3545	15	FSM	ENSMUSG00000028931.13	ENSMUST00000030768.10	3597	15	53	-1	8	0	multi-exon	FALSE	canonical	1	4	junction_13	3.43748840443313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTGATCTCTCCTTTC	NA	False	NA	-4	True	AATAAA	-22	NA	152561993	152475200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152520261_152520395_152561857
Isoform_129667_77	chr4	-	2011	7	FSM	ENSMUSG00000029027.10	ENSMUST00000030893.3	2093	7	77	5	2	-5	multi-exon	FALSE	canonical	3	25	junction_6	5.79271573232759	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGACATGTCAAAATTT	NA	False	NA	NA	False	AATAAA	-10	NA	154059506	154048910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154057236_154057426_154059025_154059153_154059323
Isoform_129669_3	chr4	-	441	4	FSM	ENSMUSG00000078350.12	ENSMUST00000125533.9	2568	4	273	1854	9	0	multi-exon	FALSE	canonical	3	10	junction_2	12.1928941054479	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGGATTCCCTCCCA	NA	False	NA	-22	True	AATAAA	-17	NA	154110414	154107766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154107911_154108144_154108275_154109960_154110079_154110365
Isoform_12967_20	chr11	-	2820	18	FSM	ENSMUSG00000020400.18	ENSMUST00000018482.13	2810	18	-14	4	-9	-2	multi-exon	FALSE	canonical	3	7	junction_17	76.4117873477302	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATTTTGTGACTGGCT	6831	False	NA	-9	True	CATAAA	-14	NA	54853752	54801616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
Isoform_129670_15	chr4	-	537	4	FSM	ENSMUSG00000078350.12	ENSMUST00000146054.8	707	4	194	-24	10	23	multi-exon	FALSE	canonical	3	33	junction_2	2.35702260395516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGGCCATTTGTGCAGA	NA	False	NA	1	True	AATAAA	-40	NA	154110413	154107743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154107911_154108144_154108349_154109960_154110079_154110365
Isoform_129671_7	chr4	-	3247	4	FSM	ENSMUSG00000078350.12	ENSMUST00000146054.8	707	4	184	-2724	0	1	multi-exon	FALSE	canonical	3	33	junction_2	2.35702260395516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGCGTTCAACCTGAC	NA	False	NA	NA	False	AATAAA	-15	NA	154110423	154105043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154107911_154108144_154108349_154109960_154110079_154110365
Isoform_129674_21	chr4	-	1786	4	NIC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	-25	-7	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	329.056226198502	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAATGGAGTTGCTCCT	NA	False	NA	-10	True	AGTAAA	-9	NA	154245148	154241948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154243023_154243725_154243880_154244497_154244719_154244811
Isoform_129675_1179	chr4	-	1741	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	-24	7	-24	-7	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAATGGAGTTGCTCCT	NA	False	NA	-10	True	AGTAAA	-9	NA	154245147	154241948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
Isoform_129684_21	chr4	-	1587	3	FSM	ENSMUSG00000029030.15	ENSMUST00000134492.2	915	3	-24	-648	-24	-7	multi-exon	FALSE	canonical	3	8	junction_1	369	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAATGGAGTTGCTCCT	NA	False	NA	-10	True	AGTAAA	-9	NA	154245147	154241948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154243023_154244541_154244719_154244811
Isoform_129687_5	chr4	-	3013	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-25	17	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCTCATGTTCTGTC	NA	False	NA	51	True	AATATA	-21	NA	154384536	154362925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
Isoform_129688_21	chr4	-	2915	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	10	-46	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGTTTTACATGTGA	NA	False	NA	-12	True	CATAAA	-13	NA	154384501	154362988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
Isoform_129689_8	chr4	-	2858	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-32	17	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCTCATGTTCTGTC	NA	False	NA	51	True	AATATA	-21	NA	154384381	154362925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
Isoform_129690_3	chr4	-	3113	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-142	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACAGGTAGGTGGAGAC	NA	False	NA	34	True	AATATA	-4	NA	154384653	154362942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
Isoform_129691_3	chr4	-	3063	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-138	-46	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGTTTTACATGTGA	NA	False	NA	-12	True	CATAAA	-13	NA	154384649	154362988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
Isoform_129692_20	chr4	-	2800	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	12	48	12	-48	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTTGTTTTACATGT	NA	False	NA	-14	True	CATAAA	-11	NA	154384499	154362990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
Isoform_129693_10	chr4	-	2896	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	-16	-20	-16	20	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTCATGTTCTGTCCTT	NA	False	NA	54	True	AATATA	-24	NA	154384527	154362922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
Isoform_129694_26	chr4	-	2627	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	185	48	23	-48	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTTGTTTTACATGT	NA	False	NA	-14	True	CATAAA	-11	NA	154384326	154362990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
Isoform_129695_12	chr4	-	2749	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	130	-19	-32	19	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTCATGTTCTGTCCT	NA	False	NA	53	True	AATATA	-23	NA	154384381	154362923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
Isoform_129697_4	chr4	-	3573	7	NIC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	-18	-2353	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	6.91415617089718	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGGTGTGTGCTTTTT	NA	False	NA	-4	True	NA	NA	NA	154419327	154402934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419031
Isoform_129699_5	chr4	-	3372	7	NIC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	-25	-2356	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	6.36177822799744	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCAAGGTGTGTGCTT	NA	False	NA	-7	True	NA	NA	NA	154419404	154402937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
Isoform_12970_176	chr11	-	2636	17	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	64.3996312101242	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	3605	False	NA	-6	True	CATAAA	-17	NA	54846925	54801613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
Isoform_129700_7	chr4	-	3446	6	NNC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	5233	-2357	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	7.55248303539968	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGCAAGGTGTGTGCT	NA	False	NA	-8	True	NA	NA	NA	154414076	154402938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154413825
Isoform_129702_6	chr4	-	3384	6	NIC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	2	-2347	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.81816307401944	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCTTTTTTTTTCC	NA	False	NA	2	True	NA	NA	NA	154419307	154402928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419031
Isoform_129703_4	chr4	-	3168	6	NIC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	0	-2360	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.38093073590279	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGAGCAAGGTGTGT	NA	False	NA	-11	True	NA	NA	NA	154419379	154402941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
Isoform_129705_5	chr4	-	3272	5	NNC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	5234	-2355	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	9.73396116696589	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCAAGGTGTGTGCTTT	NA	False	NA	-6	True	NA	NA	NA	154414075	154402936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154413825
Isoform_129706_40	chr4	-	3742	2	FSM	ENSMUSG00000086810.2	ENSMUST00000138077.2	3414	2	-311	-17	-311	17	multi-exon	FALSE	canonical	3	15	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAATAGTGATTTGTAA	NA	False	NA	-5	True	ATTAAA	-15	NA	154740086	154730193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154733095_154739245
Isoform_129707_16	chr4	-	3815	2	FSM	ENSMUSG00000086810.2	ENSMUST00000138077.2	3414	2	-391	-10	-391	10	multi-exon	FALSE	canonical	3	15	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAATGCTGAATAGTGA	NA	False	NA	-12	True	ATTAAA	-8	NA	154740166	154730200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154733095_154739245
Isoform_129709_105	chr4	-	810	7	FSM	ENSMUSG00000029059.10	ENSMUST00000030935.10	883	7	45	28	-27	-28	multi-exon	FALSE	canonical	3	64	junction_6	8.17856276425687	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGTCTCACTGCTTCC	NA	False	NA	-34	True	ATTAAA	-17	NA	154983522	154980883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_154981055_154981496_154981616_154981805_154981882_154981962_154982027_154982584_154982637_154982932_154983138_154983399
Isoform_12971_18	chr11	-	2645	17	FSM	ENSMUSG00000020400.18	ENSMUST00000108886.8	2642	17	-4	1	-3	-1	multi-exon	FALSE	canonical	3	13	junction_16	76.2520491527933	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	6837	False	NA	-6	True	CATAAA	-17	NA	54853746	54801613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
Isoform_129718_139	chr4	-	1473	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	47	283	47	-283	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTAATTGTTTGAGA	NA	False	NA	-43	True	TATAAA	-8	NA	155170781	155158849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
Isoform_129723_18	chr4	-	1487	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	48	-265	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_7	625.276037002042	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTTTGACACTTTCCT	NA	False	NA	-25	True	TATAAA	-26	NA	155170780	155158831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167772_155170661
Isoform_129730_368	chr4	-	1299	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	35	262	33	-262	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGACACTTTCCTTTG	NA	False	NA	-22	True	TATAAA	-29	NA	155170795	155158828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
Isoform_129733_137	chr4	-	1332	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	3	261	1	-261	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACACTTTCCTTTGA	NA	False	NA	-21	True	TATAAA	-30	NA	155170827	155158827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
Isoform_129736_46	chr4	-	1575	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	20	1	18	-1	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTTCGTCTACACGAGT	NA	False	NA	-14	True	ATTAAA	-21	NA	155170810	155158567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
Isoform_129737_106	chr4	-	1548	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	49	-1	47	1	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGTCTACACGAGTCA	NA	False	NA	-12	True	ATTAAA	-23	NA	155170781	155158565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
Isoform_129744_75	chr4	-	4597	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	-485	1410	-485	-1410	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTAAGTGTGTTGGTG	NA	False	NA	-4	True	ACTAAA	-18	NA	155307534	155239941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
Isoform_129748_6	chr4	-	6010	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	-485	-3	-485	3	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTGCAGCCCCCAT	NA	False	NA	-18	True	AATAAA	-18	NA	155307534	155238528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
Isoform_129751_3	chr4	-	5965	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	-551	108	-551	-108	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGCATATTTATCTATT	NA	False	NA	-19	True	TATAAA	-40	NA	155307600	155238639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
Isoform_129757_4	chr4	-	4473	6	NIC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-485	-1411	intron_retention	FALSE	canonical	3	19	junction_5	92.6809581305675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTAAGTGTGTTGGT	NA	False	NA	-5	True	ACTAAA	-17	NA	155307534	155239942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155306008
Isoform_129760_304	chr4	-	2327	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-34	348	-34	31	multi-exon	FALSE	canonical	3	142	junction_14	28.8196876191202	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTCTGATGCCTTTTT	NA	False	NA	-5	True	AATAAA	-20	NA	155445852	155346525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
Isoform_129763_28	chr4	-	4267	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-30	-1596	-30	4	multi-exon	FALSE	canonical	3	142	junction_14	28.8196876191202	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCTTCCTGTTATTA	NA	False	NA	-7	True	ATTAAA	-12	NA	155445848	155344581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
Isoform_129766_19	chr4	-	2234	17	NIC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-34	28	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	50.979009160634	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCCTCTGATGCCTT	NA	False	NA	-8	True	AATAAA	-17	NA	155445852	155346528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155441937_155442060_155445608
Isoform_129770_12	chr4	-	1264	8	FSM	ENSMUSG00000029061.3	ENSMUST00000030937.2	1434	8	167	3	-10	-1	multi-exon	FALSE	canonical	2	6	junction_5	2.50713268211203	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGTGTTGTTTCCT	NA	False	NA	NA	False	GATAAA	-13	NA	155737674	155735114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155735341_155735463_155735591_155735695_155735807_155735887_155736053_155736441_155736610_155736678_155736819_155736905_155737043_155737484
Isoform_129779_130	chr4	-	3746	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-2	0	intron_retention	FALSE	canonical	3	72	junction_13	70.1036035839604	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7423	False	NA	-6	True	TATAAA	-12	NA	155753652	155739139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_129780_33	chr4	-	3778	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-28	0	intron_retention	FALSE	canonical	3	72	junction_13	70.1036035839604	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7392	False	NA	-5	True	TATAAA	-13	NA	155753683	155739138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_129782_8	chr4	-	3946	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	8	204	intron_retention	FALSE	canonical	3	72	junction_13	70.1036035839604	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTCACGTGGCTTTTC	7433	False	NA	NA	False	NA	NA	NA	155753642	155738929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_129785_13	chr4	-	3670	21	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_20	86.4360312601174	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7416	False	NA	-5	True	TATAAA	-13	NA	155753659	155739138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
Isoform_129789_24	chr4	-	3793	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-55	0	intron_retention	FALSE	canonical	3	119	junction_13	62.6646971262766	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7365	False	NA	-5	True	TATAAA	-13	NA	155753710	155739138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_129790_100	chr4	-	3734	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	119	junction_13	62.6646971262766	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7424	False	NA	-5	True	TATAAA	-13	NA	155753651	155739138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_129799_31	chr4	-	3668	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	-28	2	-28	-1	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7392	False	NA	-7	True	TATAAA	-11	NA	155753683	155739140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_1298_1985	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1985	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV8001_+_0_8000
Isoform_129800_162	chr4	-	3636	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	6	0	1	0	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7426	False	NA	-5	True	TATAAA	-13	NA	155753649	155739138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_129804_9	chr4	-	3842	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	8	-208	3	203	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTCACGTGGCTTTT	7428	False	NA	NA	False	NA	NA	NA	155753647	155738930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_129807_35	chr4	-	3552	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_19	79.1919019895357	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7425	False	NA	-6	True	TATAAA	-12	NA	155753650	155739139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
Isoform_129810_8	chr4	-	3831	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-6	0	intron_retention	FALSE	canonical	3	72	junction_12	72.017744726946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7414	False	NA	-5	True	TATAAA	-13	NA	155753661	155739138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_129812_25	chr4	-	3707	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	0	intron_retention	FALSE	canonical	3	118	junction_11	58.8548740018329	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7429	False	NA	-6	True	TATAAA	-12	NA	155753646	155739139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_129813_8	chr4	-	3770	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-55	-1	intron_retention	FALSE	canonical	3	118	junction_11	58.8548740018329	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7365	False	NA	-7	True	TATAAA	-11	NA	155753710	155739140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_12982_1007	chr11	-	2470	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	17	2	-13	-2	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTGATGTGTGTGCTT	NA	False	NA	-6	True	NA	NA	NA	54924254	54869935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
Isoform_129834_1437	chr4	-	2407	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	6	0	0	0	multi-exon	FALSE	canonical	3	684	junction_5	53.203759265676	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845544	155825097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
Isoform_129839_16	chr4	-	2672	15	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	-10	intron_retention	FALSE	canonical	3	684	junction_5	53.4872195301011	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845550	155825107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
Isoform_12984_25	chr11	-	2510	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	-26	5	-26	-5	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAGTGATGTGTGTG	NA	False	NA	-9	True	NA	NA	NA	54924297	54869938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
Isoform_129854_5	chr4	-	2319	4	FSM	ENSMUSG00000042116.4	ENSMUST00000042196.4	3623	4	147	1157	147	-1157	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTCTCCCCAGCTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	155859008	155853762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155855123_155855201_155855481_155857165_155857724_155858886
Isoform_129855_246	chr4	-	2114	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	-8	556	-8	17	multi-exon	FALSE	canonical	3	76	junction_1	2.5	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGCATTCTGGGA	NA	False	NA	-26	True	AATAAA	-15	NA	155953905	155949735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155951343_155951569_155951795_155953623
Isoform_129856_17	chr4	-	2318	2	NIC	ENSMUSG00000029073.10	novel	2662	3	NA	NA	15	17	intron_retention	FALSE	canonical	3	81	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGCATTCTGGGA	NA	False	NA	-26	True	AATAAA	-15	NA	155953882	155949735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155951795_155953623
Isoform_129858_5	chr4	-	1233	8	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	119.008660291971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9149	False	NA	NA	False	AATAAA	-14	NA	155976169	155973318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976028
Isoform_129859_239	chr4	-	1185	8	FSM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	59	-1	4	1	multi-exon	FALSE	canonical	3	268	junction_3	43.9103911276089	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9139	False	NA	NA	False	AATAAA	-15	NA	155976179	155973317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
Isoform_129862_8	chr4	-	2165	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	14	1	intron_retention	FALSE	canonical	3	293	junction_5	33.0357382239296	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9149	False	NA	NA	False	AATAAA	-15	NA	155976169	155973317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814
Isoform_129865_6	chr4	-	2073	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	21	junction_6	128.003146662711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGGTCTGTTTATTA	9082	False	NA	NA	False	AATAAA	-12	NA	155976236	155973320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976028
Isoform_129866_39	chr4	-	1956	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	8	1	intron_retention	FALSE	canonical	3	293	junction_5	37.4985184892535	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9143	False	NA	NA	False	AATAAA	-15	NA	155976175	155973317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
Isoform_129867_33	chr4	-	1986	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	7	1	intron_retention	FALSE	canonical	3	293	junction_5	37.4985184892535	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9113	False	NA	NA	False	AATAAA	-15	NA	155976205	155973317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
Isoform_129870_4	chr4	-	2160	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	293	junction_4	37.5126645281297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9087	False	NA	NA	False	AATAAA	-14	NA	155976231	155973318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975697_155975814_155975873_155976087
Isoform_129871_4	chr4	-	1450	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_7	153.136593688545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9116	False	NA	NA	False	AATAAA	-15	NA	155976202	155973317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_155973626_155973890_155974054_155974125_155974364_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976028
Isoform_129872_5	chr4	-	1428	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	3	5	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	118.182321962677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTTTATTACTTTAGC	9083	False	NA	NA	False	AATAAA	-19	NA	155976235	155973313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_155973626_155973890_155974054_155974125_155974364_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
Isoform_129874_5	chr4	-	2279	5	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	293	junction_4	36.8917334913934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9107	False	NA	NA	False	AATAAA	-15	NA	155976211	155973317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_155973626_155973890_155975127_155975209_155975360_155975508_155975697_155975814
Isoform_129888_12	chr4	-	7400	37	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_6	111.864842803964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281954	156249746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254002_156254015_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
Isoform_12991_551	chr11	-	2452	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	17	2	-13	-2	multi-exon	FALSE	canonical	3	220	junction_5	83.6892399827414	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTGATGTGTGTGCTT	NA	False	NA	-6	True	NA	NA	NA	54924254	54869935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
Isoform_129934_126	chr4	-	7372	36	FSM	ENSMUSG00000041936.19	ENSMUST00000180572.2	6891	36	3	-484	3	0	multi-exon	FALSE	canonical	3	186	junction_32	92.1507460631763	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281942	156249750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
Isoform_129937_6	chr4	-	6913	35	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4887	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_34	104.741104452539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATAGGGACTGTGTTTG	NA	False	NA	-26	True	AATAAA	-13	NA	156277058	156249751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156276982
Isoform_129939_20	chr4	-	7489	35	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-10	0	intron_retention	FALSE	canonical	3	186	junction_31	91.1822768549719	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281955	156249750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
Isoform_129941_7	chr4	-	2015	16	FSM	ENSMUSG00000078485.5	ENSMUST00000217885.2	1982	16	-28	-5	-13	1	multi-exon	FALSE	canonical	2	4	junction_14	4.43721634461166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTCAAGGTTGTCTCTA	NA	False	NA	-5	True	ATTAAA	-21	NA	156313012	156306117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156310130_156312673_156312774_156312865
Isoform_129942_3	chr4	-	4527	15	NIC	ENSMUSG00000078485.5	novel	2004	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	7	junction_2	3.51962428421569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTCAAGGTTGTCTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	156312981	156306118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156312774_156312865
Isoform_129943_74	chr4	-	2695	12	FSM	ENSMUSG00002076083.1	ENSMUST00000105569.5	2723	12	22	6	22	-1	multi-exon	TRUE	canonical	3	34	junction_1	16.0850014835956	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCATCTTTGGCCCCCT	8270	False	NA	-6	True	AATAAA	-34	NA	156319292	156313797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129945_6	chr4	-	3183	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	12	-1	intron_retention	FALSE	canonical	3	34	junction_1	15.2105226734652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCATCTTTGGCCCCCT	8260	False	NA	-6	True	AATAAA	-34	NA	156319302	156313797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129946_6	chr4	-	2733	12	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	23.0615418119388	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCATCTTTGGCCCCCT	8262	False	NA	-6	True	AATAAA	-34	NA	156319300	156313797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156314720_156314961_156315144_156315357_156315462_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129947_10	chr4	-	2942	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	22	-1	intron_retention	FALSE	canonical	3	41	junction_7	13.8596536753268	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGGCCCCCTTTGTA	8270	False	NA	-1	True	AATAAA	-39	NA	156319292	156313792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129950_7	chr4	-	2861	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	10	junction_7	20.8076908858239	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCATCTTTGGCCCCCT	8279	False	NA	-6	True	AATAAA	-34	NA	156319283	156313797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129951_13	chr4	-	3416	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	26	-1	intron_retention	FALSE	canonical	3	45	junction_2	11.6999525165228	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGGCCCCCTTTGTA	8274	False	NA	-1	True	AATAAA	-39	NA	156319288	156313792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129952_4	chr4	-	2894	11	FSM	ENSMUSG00002076083.1	ENSMUST00020183325.1	2830	11	-45	-19	12	2	multi-exon	FALSE	canonical	2	8	junction_2	26.227657158046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATCTTTGGCCCCCTTTG	8260	False	NA	-3	True	AATAAA	-37	NA	156319302	156313794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_156315144_156315357_156315462_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129953_4	chr4	-	2991	10	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	11	-1	intron_retention	FALSE	canonical	3	10	junction_6	21.0226215606891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCATCTTTGGCCCCCT	8259	False	NA	-6	True	AATAAA	-34	NA	156319303	156313797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156315144_156315357_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129954_9	chr4	-	3523	9	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	23	-2	intron_retention	FALSE	canonical	3	62	junction_4	8.67377512966528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8271	False	NA	-7	True	AATAAA	-33	NA	156319291	156313798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156315144_156315357_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129955_3	chr4	-	3421	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	8	-1	intron_retention	FALSE	canonical	3	10	junction_1	21.8569987661099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGGCCCCCTTTGTA	8256	False	NA	-1	True	AATAAA	-39	NA	156319306	156313792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156315144_156315370_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129956_4	chr4	-	2991	11	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	-27	1	intron_retention	TRUE	canonical	2	8	junction_2	26.5601204816544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCCCCCTTTGTACC	8221	False	NA	1	True	AATAAA	-41	NA	156319341	156313790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_156315144_156315370_156315462_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_129958_168	chr4	-	1797	11	NNC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	31	-11	at_least_one_novel_splicesite	FALSE	canonical	3	221	junction_1	470.836925060047	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAACCTGATTTT	NA	False	NA	83	True	AATAAA	-8	NA	83404659	83380118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_83380657_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_129961_185	chr4	-	1142	9	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	29	52908	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_5	137.135368796675	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACACAGTCTTTCT	-10	True	NA	NA	False	ATTAAA	-36	NA	12171842	12100500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_12100591_12153816_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_129962_8	chr4	-	1293	9	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	2	52908	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	137.135368796675	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACACAGTCTTTCT	4	True	NA	NA	False	ATTAAA	-36	NA	12171993	12100500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_12100591_12153816_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_129967_13	chr4	-	6678	9	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-2	-20077	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	9.44722181384559	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGGACTGCATTTTGTC	NA	False	NA	-2	True	AATAAA	-18	NA	142939281	142854037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
Isoform_129969_4	chr4	-	6193	8	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	-9	-20495	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	15.9616888268153	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTAAATTGTTTTG	NA	False	NA	-12	True	AATAAA	-8	NA	142939288	142854455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939184
Isoform_129970_5	chr4	-	6176	5	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	32571	-20075	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	15.6584641647896	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACTGCATTTTGTCCA	NA	False	NA	0	True	AATAAA	-20	NA	142888734	142854035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142871959_142872017_142888625
Isoform_129972_5	chr4	-	6738	10	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-9	-20081	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	11.2447518622887	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGAAAGGACTGCATTT	NA	False	NA	-6	True	AATAAA	-14	NA	142939288	142854041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
Isoform_129973_71	chr4	-	1836	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127222927	127219028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_127220806_127222868
Isoform_129977_27	chr4	-	2133	7	NNC	ENSMUSG00000008305.19	novel	2067	7	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	98.8714091917151	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	-1	True	AATAAA	-19	NA	72119169	72075817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_72076652_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_129979_106	chr4	-	453	2	Intergenic	novelGene_7862	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	373	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGCCTTAGCTCCGTT	NA	False	NA	NA	False	NA	NA	NA	124252214	124246964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_124247180_124251976
Isoform_129984_12	chr4	-	2856	2	Intergenic	novelGene_7417	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGGTCTTTCATGTTTCC	NA	False	NA	1	True	NA	NA	NA	11191288	11175962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11178675_11191144
Isoform_129986_3	chr4	-	3205	2	Antisense	novelGene_ENSMUSG00000028212.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGGTCTTTCATGTTTCC	NA	False	NA	1	True	NA	NA	NA	11191637	11175962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_11178675_11191144
Isoform_129988_3	chr4	-	3635	3	Intergenic	novelGene_7418	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACGGTCTTTCATGTT	NA	False	NA	-2	True	NA	NA	NA	11191288	11175965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11178675_11182460_11183243_11191144
Isoform_129990_21	chr4	-	2217	20	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	-1	3579	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	162.441193280024	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTGTGTGGGGTT	-2	True	NA	NA	False	NA	NA	NA	34614910	34567216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_34567391_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_129991_13	chr4	-	2448	3	NNC	ENSMUSG00000046623.9	novel	1445	2	NA	NA	2	9984	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	26	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCAAGTTGTGCTTCTT	4506	False	NA	NA	False	AATAAA	-19	NA	127247872	127234894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_127236174_127245152_127246275_127247825
Isoform_129992_5	chr4	-	2559	5	NNC	ENSMUSG00000046623.9	novel	1445	2	NA	NA	2	9980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.5411873107539	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACACCCAAGTTGTGCT	4506	False	NA	NA	False	AATAAA	-15	NA	127247872	127234898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_127235593_127235616_127236174_127238397_127238537_127245152_127246275_127247825
Isoform_129993_8	chr4	-	877	2	Intergenic	novelGene_8030	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAGATTGTGGCTTGC	NA	False	NA	NA	False	NA	NA	NA	134163626	134161027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_134161794_134163515
Isoform_129994_7	chr4	-	1126	2	Intergenic	novelGene_8029	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTGACACTCGTTTTG	NA	False	NA	NA	False	AGTAAA	-18	NA	134163581	134160733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_134161794_134163515
Isoform_129995_7	chr4	-	2462	10	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	268	-35843	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	26.2429296768614	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGAATTTTTACATTT	20	True	NA	NA	False	AATAAA	-18	NA	59438365	59367799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_59368924_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
Isoform_129996_7	chr4	-	1546	4	NNC	ENSMUSG00000038544.15	novel	1654	3	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	109.77552854196	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATCCCCTTATATAATT	-31	True	NA	NA	False	AATAAA	-15	NA	59783869	59774092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_59775313_59775446_59775550_59782253_59782335_59783727
Isoform_129997_7	chr4	-	1405	4	NNC	ENSMUSG00000038544.15	novel	1654	3	NA	NA	1	-142	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	109.77552854196	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGGTTATTCAGTTTG	-27	True	NA	-3	True	NA	NA	NA	59783865	59774229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_59775313_59775446_59775550_59782253_59782335_59783727
Isoform_129998_9	chr4	-	1744	2	Intergenic	novelGene_8286	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTTGGTTTTTTTTA	NA	False	NA	1	True	NA	NA	NA	153174317	153169841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_153171301_153174032
Isoform_129999_11	chr4	-	518	2	Intergenic	novelGene_8285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTTGTTTTAAAGCT	NA	False	NA	NA	False	AATAAA	-23	NA	152668185	152665274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_152665662_152668054
Isoform_130000_8	chr4	-	651	3	Antisense	novelGene_ENSMUSG00000086159.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAAAGTAAGAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	140412318	140410733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_140411134_140411591_140411749_140412224
Isoform_130001_7	chr4	-	559	2	Intergenic	novelGene_7948	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	130362533	130359667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_130360111_130362417
Isoform_130003_4	chr4	-	1415	2	Intergenic	novelGene_8188	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAGAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	146517209	146515611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146515762_146515944
Isoform_130004_5	chr4	-	2274	3	Antisense	novelGene_ENSMUSG00000070999.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTGATATAACCAC	NA	False	NA	NA	False	NA	NA	NA	43993216	43982655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_43984710_43985992_43986071_43993074
Isoform_130007_4	chr4	-	1074	6	NNC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	3	-331	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.47584804016684	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAAGGGTTGAGTCTT	9733	False	NA	NA	False	NA	NA	NA	119272708	119248025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_119248194_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
Isoform_130012_4	chr4	-	1315	7	NNC	ENSMUSG00000040387.17	novel	5970	8	NA	NA	2	-12167	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	3.0368111930481	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGTTGCCTTGATCAT	NA	False	NA	NA	False	NA	NA	NA	24851122	24662010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_-_24662252_24682054_24682271_24708952_24709052_24743857_24743966_24792616_24792798_24800805_24800891_24850737
Isoform_130015_3	chr4	-	2189	3	Antisense	novelGene_ENSMUSG00000086665.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGTGTGTGTGTGTGTG	NA	False	NA	NA	False	TATAAA	-13	NA	150133570	150128021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_150129480_150131923_150132565_150133480
Isoform_13002_4	chr11	-	1412	7	FSM	ENSMUSG00000049588.14	ENSMUST00000055040.13	1402	7	-9	-1	-9	1	multi-exon	FALSE	canonical	0	0	junction_5	2.51661147842358	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGTGTATTTCATTCT	4844	False	NA	NA	False	AATAAA	-24	NA	54968942	54940555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_54941385_54941977_54942076_54943173_54943294_54943720_54943823_54945797_54945872_54951286_54951372_54968838
Isoform_130022_345	chr4	+	4315	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	15	-3	15	3	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTTTATTTTTTGC	-3	True	NA	14	True	NA	NA	NA	3574889	3616622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
Isoform_130033_46	chr4	+	2847	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	2	538	-1	-538	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTTTTGTCTTGTGTA	7	True	NA	17	True	AATACA	-14	NA	3678128	3791074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
Isoform_130034_4	chr4	+	3400	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	-11	-2	1	1	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATCTTGTCTTACTTCT	-6	True	NA	NA	False	ACTAAA	-19	NA	3678115	3791614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
Isoform_130037_95	chr4	+	2944	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-20	539	-20	-538	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTTTTGTCTTGTGTA	5	True	NA	17	True	AATACA	-14	NA	3678094	3791074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
Isoform_130038_7	chr4	+	3489	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-26	0	-26	0	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATCTTGTCTTACTTC	-1	True	NA	NA	False	ACTAAA	-18	NA	3678088	3791613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
Isoform_130041_7	chr4	+	2870	12	NIC	ENSMUSG00000042228.15	novel	3463	13	NA	NA	-2	-536	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	13.7696516217777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGTCTTGTGTATC	3	True	NA	19	True	AATACA	-16	NA	3678124	3791076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_3678365_3738724_3738862_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
Isoform_130042_24	chr4	+	525	5	FSM	ENSMUSG00000042198.13	ENSMUST00000108386.8	524	5	0	-1	0	1	multi-exon	FALSE	canonical	3	128	junction_1	133.401649165218	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTTTTGGGGTTTTTT	NA	False	NA	26	True	ATTAAA	-19	NA	3938887	3943524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3938963_3939378_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_130043_10	chr4	+	600	5	NNC	ENSMUSG00000042198.13	novel	524	5	NA	NA	-53	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	195.39703170724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938834	3943523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_3938963_3939378_3939527_3941245_3941312_3942720_3942820_3943364
Isoform_130044_16	chr4	+	501	5	FSM	ENSMUSG00000042198.13	ENSMUST00000149544.8	426	5	-23	-52	-21	1	multi-exon	FALSE	canonical	3	70	junction_1	158.419537936455	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTTTTGGGGTTTTTT	NA	False	NA	26	True	ATTAAA	-19	NA	3938866	3943524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3938963_3939423_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_130045_66	chr4	+	668	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	0	4	0	1	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTTTTGGGGTTTTTT	-5	True	NA	26	True	ATTAAA	-19	NA	3938913	3943524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_130046_25	chr4	+	702	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	-35	5	-9	0	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938878	3943523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_130047_15	chr4	+	623	5	FSM	ENSMUSG00000042198.13	ENSMUST00000121651.8	620	5	0	-3	0	1	multi-exon	FALSE	canonical	3	48	junction_1	167.916645988419	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTTTTGGGGTTTTTT	-5	True	NA	26	True	ATTAAA	-19	NA	3938913	3943524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3939132_3939423_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_130048_5	chr4	+	575	4	FSM	ENSMUSG00000042198.13	ENSMUST00000119307.8	889	4	333	-19	-169	0	multi-exon	FALSE	canonical	3	416	junction_3	14.7271480229163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	334	False	NA	25	True	ATTAAA	-18	NA	3939252	3943523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_130049_7	chr4	+	3248	2	ISM	ENSMUSG00000042198.13	ENSMUST00000119403.2	695	3	-1987	2	-21	0	intron_retention	FALSE	canonical	3	436	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938866	3943523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_3941312_3942720
Isoform_130050_28	chr4	+	2095	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	89	-1566	-11	2	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTTTC	6	True	NA	-96	True	NA	NA	NA	5644178	5799948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
Isoform_130052_26	chr4	+	2162	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	22	-1566	-9	2	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTTTC	5	True	NA	-96	True	NA	NA	NA	5644111	5799948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
Isoform_130053_19	chr4	+	2281	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	2	-1665	2	101	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTTGAGAGCAGAAT	-15	True	NA	3	True	ATTAAA	-17	NA	5644091	5800047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
Isoform_130055_9	chr4	+	3310	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	25	-2717	-6	-2	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGCTGATTTCTTTG	8	True	NA	10	True	AATAAA	-19	NA	5644114	5801099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
Isoform_130056_63	chr4	+	1999	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	58	1153	-11	2	multi-exon	FALSE	canonical	3	35	junction_1	17	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTTTC	6	True	NA	-96	True	NA	NA	NA	5644178	5799948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5729570_5729658_5798268
Isoform_130057_63	chr4	+	2087	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	-30	1153	1	2	multi-exon	FALSE	canonical	3	35	junction_1	17	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTTTC	-16	True	NA	-96	True	NA	NA	NA	5644090	5799948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5729570_5729658_5798268
Isoform_130058_37	chr4	+	2165	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	-6	1051	-6	104	multi-exon	FALSE	canonical	3	35	junction_1	17	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGAGAGCAGAATCTT	8	True	NA	6	True	ATTAAA	-20	NA	5644114	5800050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5729570_5729658_5798268
Isoform_130059_22	chr4	+	3150	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	59	1	-10	-1	multi-exon	FALSE	canonical	3	35	junction_1	17	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGCTGATTTCTTTGT	7	True	NA	11	True	AATAAA	-20	NA	5644179	5801100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5729570_5729658_5798268
Isoform_130060_40	chr4	+	2097	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	59	1054	-10	101	multi-exon	FALSE	canonical	3	35	junction_1	17	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTTGAGAGCAGAAT	7	True	NA	3	True	ATTAAA	-17	NA	5644179	5800047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5729570_5729658_5798268
Isoform_130061_16	chr4	+	3232	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	-22	0	9	0	multi-exon	FALSE	canonical	3	35	junction_1	17	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTGATTTCTTTGTC	-8	True	NA	12	True	AATAAA	-21	NA	5644098	5801101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_5644411_5729570_5729658_5798268
Isoform_130063_52	chr4	+	1534	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	6	5102	6	-5102	multi-exon	FALSE	canonical	3	103	junction_2	16.4614577676685	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACAACTGTCATAAA	-4	True	NA	NA	False	AATATA	-20	NA	6191103	6216586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
Isoform_130066_19	chr4	+	6634	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	1	7	1	-7	multi-exon	TRUE	canonical	3	103	junction_2	16.4614577676685	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCTTTCGTGCCTCA	-9	True	NA	15	True	AATAAA	-17	NA	6191098	6221681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
Isoform_130068_270	chr4	+	2049	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	64	632	1	-3	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCGTCTGTCTGTGC	5	True	NA	10	True	ATTAAA	-15	NA	6365713	6395652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_130069_177	chr4	+	2079	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	34	632	7	-3	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCGTCTGTCTGTGC	2	True	NA	10	True	ATTAAA	-15	NA	6365683	6395652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_130070_25	chr4	+	2515	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	59	171	0	-171	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGAAATTGTGTTT	0	True	NA	NA	False	NA	NA	NA	6365708	6396113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_130071_19	chr4	+	2538	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	36	171	9	-171	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGAAATTGTGTTT	4	True	NA	NA	False	NA	NA	NA	6365685	6396113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_130078_92	chr4	+	2048	9	FSM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	36	2	0	-2	multi-exon	FALSE	canonical	3	130	junction_4	110.946425697271	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCGTCTGTCTGTGCC	4	True	NA	11	True	ATTAAA	-16	NA	6365712	6395653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_130079_74	chr4	+	2078	9	FSM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	6	2	6	-2	multi-exon	FALSE	canonical	3	130	junction_4	110.946425697271	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCGTCTGTCTGTGCC	1	True	NA	11	True	ATTAAA	-16	NA	6365682	6395653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_130081_12	chr4	+	2514	9	FSM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	30	-458	-1	-171	multi-exon	FALSE	canonical	3	130	junction_4	110.946425697271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGAAATTGTGTTT	-2	True	NA	NA	False	NA	NA	NA	6365706	6396113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_130093_492	chr4	+	2081	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-21	73	-21	-73	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCCTTCTCATGATG	-38	True	NA	13	True	AATAAA	-13	NA	8535622	8607705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
Isoform_130100_13	chr4	+	2108	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-48	73	-48	-73	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCCTTCTCATGATG	NA	False	NA	13	True	AATAAA	-13	NA	8535595	8607705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
Isoform_130119_3	chr4	+	3392	8	NIC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	104	-8	combination_of_known_junctions	TRUE	canonical	3	67	junction_1	9.84782167977948	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTAGTTATAGAATG	1133	False	NA	8	True	AATAAA	-18	NA	8855334	8867651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
Isoform_130120_112	chr4	+	2111	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	6	-1	6	1	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTCTCTGTGCAAT	NA	False	NA	12	True	AATAAA	-16	NA	10874503	10899422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
Isoform_130121_129	chr4	+	2013	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	104	-1	34	1	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTCTCTGTGCAAT	29	True	NA	12	True	AATAAA	-16	NA	10874601	10899422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
Isoform_130123_3	chr4	+	2408	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	-291	-1	-291	1	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTCTCTGTGCAAT	NA	False	NA	12	True	AATAAA	-16	NA	10874206	10899422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
Isoform_130124_104	chr4	+	5433	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	-2	1	-2	-1	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGGAGGATTCTTTTA	6	True	NA	15	True	AATAAA	-16	NA	11156438	11174378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
Isoform_130127_208	chr4	+	5355	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	47	2	34	-2	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGGAGGATTCTTTT	2	True	NA	14	True	AATAAA	-15	NA	11156477	11174377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
Isoform_130132_222	chr4	+	2625	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	54	229	48	-222	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAACTAACTGCTTAAAAG	1	True	NA	2	True	AATAAA	-12	NA	11191783	11204453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
Isoform_130136_5	chr4	+	2953	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	54	-99	48	2	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGATGGTTGTCTTTAG	1	True	NA	NA	False	AATAAA	-25	NA	11191783	11204781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
Isoform_130137_4	chr4	+	3106	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	53	-251	47	154	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTGTCTCTGACCGA	0	True	NA	NA	False	NA	NA	NA	11191782	11204933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
Isoform_130142_9	chr4	+	3880	13	FSM	ENSMUSG00000040720.16	ENSMUST00000055372.14	3954	13	79	-5	-6	5	multi-exon	FALSE	canonical	3	55	junction_9	7.54799458281617	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTATACTTTTTTAACA	13	True	NA	NA	False	AATAAA	-20	NA	11486036	11527626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594
Isoform_130143_12	chr4	+	5747	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	-42	801	-42	-801	multi-exon	TRUE	canonical	3	55	junction_9	10.2468585254619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATATATTTTTC	NA	False	NA	13	True	AATAAA	-18	NA	11485915	11549883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
Isoform_130144_73	chr4	+	5630	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	73	803	-12	-803	multi-exon	FALSE	canonical	3	55	junction_9	10.2468585254619	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTGTATATATTTT	7	True	NA	11	True	AATAAA	-16	NA	11486030	11549881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
Isoform_130145_17	chr4	+	6441	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	65	0	-20	0	multi-exon	FALSE	canonical	3	55	junction_9	10.2468585254619	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGTGTATGAGTCT	-1	True	NA	NA	False	TATAAA	-29	NA	11486022	11550684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
Isoform_130146_4	chr4	+	6513	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	-2	-5	-2	5	multi-exon	FALSE	canonical	3	55	junction_9	10.2468585254619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTATGAGTCTCATTC	0	True	NA	NA	False	TATAAA	-34	NA	11485955	11550689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
Isoform_130153_10	chr4	+	3896	5	NIC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	8	7	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	90.9202947641504	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGAATTTATGTTATGT	-17	True	NA	NA	False	AATAAA	-16	NA	11558929	11585751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11580108_11583676
Isoform_130154_29	chr4	+	2500	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	9	6	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	91.7261549395809	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGAATTTATGTTATG	-16	True	NA	NA	False	AATAAA	-15	NA	11558930	11585750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11583676
Isoform_130158_19	chr4	+	2423	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	-12	-8	8	8	multi-exon	FALSE	canonical	3	32	junction_3	85.9883713068226	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATTTATGTTATGTA	-17	True	NA	NA	False	AATAAA	-17	NA	11558929	11585752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
Isoform_13016_166	chr11	-	2064	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	51	0	51	0	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3909	False	NA	-2	True	AATAAA	-22	NA	55310673	55285325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
Isoform_130160_184	chr4	+	2911	15	FSM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	-41	0	9	0	multi-exon	FALSE	canonical	3	142	junction_12	66.7496464868725	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-16	True	NA	19	True	AGTAAA	-16	NA	11558930	11615805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
Isoform_130163_20	chr4	+	2710	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	84	junction_13	71.5348220745028	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-16	True	NA	19	True	AGTAAA	-16	NA	11558930	11615805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11615442
Isoform_130164_5	chr4	+	2646	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	83.7876295398391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-13	True	NA	19	True	AGTAAA	-16	NA	11558933	11615805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11612617_11612819_11615442
Isoform_130165_8	chr4	+	2448	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	86.901724506607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-16	True	NA	19	True	AGTAAA	-16	NA	11558930	11615805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11615442
Isoform_130167_8	chr4	+	2829	15	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	82.4728774216353	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-16	True	NA	19	True	AGTAAA	-16	NA	11558930	11615805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
Isoform_130168_7	chr4	+	4622	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-8	-10	intron_retention	FALSE	canonical	3	27	junction_7	82.94619343838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTTGCTTTCTTGTGT	-13	True	NA	9	True	AGTAAA	-6	NA	11558933	11615795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11612617_11612819_11615442
Isoform_130169_8	chr4	+	2554	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_7	96.9667789143156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-3	True	NA	19	True	AGTAAA	-16	NA	11558943	11615805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11612617_11612819_11615442
Isoform_130170_6	chr4	+	5479	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	2	3	intron_retention	FALSE	canonical	3	27	junction_7	86.2317210904562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATCCTTAAGTG	-23	True	NA	22	True	AGTAAA	-19	NA	11558923	11615808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11612439_11612617_11612819_11615442
Isoform_130175_7	chr4	+	2059	5	FSM	ENSMUSG00000028214.14	ENSMUST00000108304.9	2006	5	-61	8	-61	-8	multi-exon	FALSE	canonical	1	1	junction_2	2.17944947177034	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAGCATTCTGCTAT	9557	False	NA	NA	False	AATAAA	-18	NA	11704395	11714744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_11704567_11705904_11706242_11711138_11711216_11711969_11712175_11713475
Isoform_130177_14	chr4	+	3426	4	FSM	ENSMUSG00000052137.12	ENSMUST00000063839.6	3327	4	-72	-27	-70	27	multi-exon	FALSE	canonical	2	9	junction_1	21.6692306175267	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTTGTATTTGTGTAA	NA	False	NA	11	True	AATAAA	-19	NA	12089368	12096270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_12089524_12089662_12089728_12092522_12092573_12093114
Isoform_130178_7	chr4	+	3478	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-55	26	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	24.3082062046727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTTGTATTTGTGTA	-1	True	NA	10	True	AATAAA	-18	NA	12089383	12096269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_12089524_12089662_12089796_12092522_12092573_12093114
Isoform_130181_6	chr4	+	3552	3	FSM	ENSMUSG00000052137.12	ENSMUST00000095143.9	3147	3	-59	-346	-59	25	multi-exon	FALSE	canonical	3	33	junction_1	14.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAACTTGTATTTGTGT	-5	True	NA	9	True	AATAAA	-17	NA	12089379	12096268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_12089728_12092522_12092573_12093114
Isoform_130183_5	chr4	+	2947	4	FSM	ENSMUSG00000046667.15	ENSMUST00000050069.9	2949	4	42	-40	-8	9	multi-exon	FALSE	canonical	3	18	junction_1	18.4089350286454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATTTCCTGTATTCATT	8	False	NA	NA	False	AATAAA	-27	NA	12140308	12146740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_12140402_12140540_12140606_12143409_12143460_12144001
Isoform_130184_3	chr4	+	3056	3	FSM	ENSMUSG00000046667.15	ENSMUST00000069128.8	3069	3	8	5	8	-5	multi-exon	FALSE	canonical	3	38	junction_1	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGACAGGTGGAAGAGAAT	24	False	NA	NA	False	AATAAA	-13	NA	12140324	12146726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_12140606_12143409_12143460_12144001
Isoform_130185_3	chr4	+	1461	5	FSM	ENSMUSG00000055963.13	ENSMUST00000143186.8	888	5	32	-605	12	408	multi-exon	FALSE	canonical	3	8	junction_2	1.6393596310755	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCACATGTTACTTTTA	9	True	NA	NA	False	AATAAA	-14	NA	12906869	12981478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_12906939_12917915_12918066_12962941_12963024_12974729_12974816_12980404
Isoform_130187_4	chr4	+	3522	11	FSM	ENSMUSG00000006586.16	ENSMUST00000006761.10	5783	11	-273	2534	-273	-2	multi-exon	FALSE	canonical	0	0	junction_1	2.05182845286832	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	370	False	NA	NA	False	NA	NA	NA	13743162	13891115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_13743730_13835632_13835771_13837759_13838002_13841797_13841888_13846775_13846958_13859810_13860062_13865200_13865287_13865830_13866033_13875476_13875546_13881049_13881241_13889611
Isoform_130189_319	chr4	+	2281	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	143	-85	143	85	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACTTTGTTCTATTT	-49	True	NA	6	True	AATAAA	-13	NA	14864218	14915261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_130190_20	chr4	+	2464	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	-40	-85	-40	85	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACTTTGTTCTATTT	2	True	NA	6	True	AATAAA	-13	NA	14864035	14915261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_130192_34	chr4	+	2495	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	166	-322	166	322	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGTAACAGCTCTCA	-26	True	NA	NA	False	AATAAA	-27	NA	14864241	14915498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_130194_6	chr4	+	2513	8	NNC	ENSMUSG00000028221.4	novel	2339	7	NA	NA	-114	85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.617909736668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACTTTGTTCTATTT	NA	False	NA	6	True	AATAAA	-13	NA	14863961	14915261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_14863982_14864006_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_130196_33	chr4	+	2403	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	21	-85	21	85	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACTTTGTTCTATTT	-24	True	NA	6	True	AATAAA	-13	NA	14864096	14915261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_130200_14	chr4	+	899	6	FSM	ENSMUSG00000086587.8	ENSMUST00000136992.8	876	6	-22	-1	-22	1	multi-exon	FALSE	canonical	3	31	junction_5	12.687001221723	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGTACAGAATTTTTG	-22	True	NA	7	True	TATAAA	-18	NA	14930638	14953031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14947438_14947546_14952620
Isoform_130201_7	chr4	+	988	6	FSM	ENSMUSG00000086587.8	ENSMUST00000136992.8	876	6	-115	3	-115	-3	multi-exon	FALSE	canonical	3	31	junction_5	12.687001221723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATATATGGTACAGAATT	680	False	NA	3	True	TATAAA	-14	NA	14930545	14953027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14947438_14947546_14952620
Isoform_130202_452	chr4	+	3307	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-53	1416	-53	-1416	multi-exon	FALSE	canonical	3	428	junction_2	4.5	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTATGGATTGACAATT	3	True	NA	4	True	AATAAA	-15	NA	15265777	15285337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_15266750_15281006_15281163_15283158
Isoform_130207_369	chr4	+	4717	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-53	6	-53	-6	multi-exon	FALSE	canonical	3	428	junction_2	4.5	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTCTTCTCTCTTCTCT	3	True	NA	12	True	AATAAA	-13	NA	15265777	15286747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_15266750_15281006_15281163_15283158
Isoform_130228_345	chr4	+	2502	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	31	0	-11	0	multi-exon	FALSE	canonical	3	165	junction_3	27.9629914152418	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-14	True	NA	9	True	AATAAA	-15	NA	15957955	15992589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
Isoform_130233_46	chr4	+	2435	16	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	canonical	3	34	junction_3	53.2213825032341	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-29	True	NA	9	True	AATAAA	-15	NA	15957940	15992589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964328_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
Isoform_130235_10	chr4	+	1141	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-130	723	-85	-723	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTGTATGGCTTTTTTTC	5	True	NA	12	True	TATAAA	-20	NA	19575076	19606209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
Isoform_130236_29	chr4	+	1064	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-53	723	-8	-723	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTGTATGGCTTTTTTTC	-24	True	NA	12	True	TATAAA	-20	NA	19575153	19606209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
Isoform_130238_19	chr4	+	2580	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	280	2	-70	-2	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGTGTTTATATTTT	297	False	NA	19	True	AATAAA	-15	NA	20008286	20030468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
Isoform_13024_608	chr11	-	2087	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	213	0	31	0	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3889	False	NA	-2	True	AATAAA	-22	NA	55310693	55285325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
Isoform_130240_13	chr4	+	2825	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	-89	317	-18	-2	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGTGTTTATATTTT	349	False	NA	19	True	AATAAA	-15	NA	20008338	20030468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
Isoform_130241_35	chr4	+	2786	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	-51	318	20	-3	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGGTGTTTATATTT	387	False	NA	18	True	AATAAA	-14	NA	20008376	20030467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
Isoform_130242_58	chr4	+	1266	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	53	646	53	-646	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATACTTTGTCTGTGAT	28	True	NA	NA	False	AATACA	-10	NA	20042104	20066104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
Isoform_130245_46	chr4	+	1440	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	-49	15	5	-15	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAAAACCAACTTTT	0	True	NA	-3	True	NA	NA	NA	21727705	21747947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
Isoform_130246_144	chr4	+	1391	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	0	15	0	-15	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAAAACCAACTTTT	-5	True	NA	-3	True	NA	NA	NA	21727754	21747947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
Isoform_130248_7	chr4	+	1177	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	-87	316	-33	-316	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGGTTTGTTATCATT	NA	False	NA	NA	False	AATAAA	-18	NA	21727667	21747646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
Isoform_130252_8	chr4	+	3478	13	FSM	ENSMUSG00000028252.21	ENSMUST00000065928.11	3484	13	6	0	6	0	multi-exon	FALSE	canonical	3	29	junction_12	125.983023547707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	1	True	NA	NA	False	NA	NA	NA	21727706	21750546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482_21747577_21748136
Isoform_130255_49	chr4	+	3384	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	-19	0	6	0	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	1	True	NA	NA	False	NA	NA	NA	21727706	21750546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
Isoform_130256_156	chr4	+	3336	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	29	0	0	0	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	-5	True	NA	NA	False	NA	NA	NA	21727754	21750546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
Isoform_13026_316	chr11	-	2128	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	172	0	-8	0	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3848	False	NA	-2	True	AATAAA	-22	NA	55310734	55285325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
Isoform_130262_7	chr4	+	2482	8	ISM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	-3	37560	-3	1649	5prime_fragment	FALSE	canonical	3	17	junction_5	4.80221037542046	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATATTGTTGAAGAAT	-11	True	NA	NA	False	AATAAA	-16	NA	21776268	21800310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604
Isoform_130263_4	chr4	+	6007	18	FSM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	-2	-2	-2	0	multi-exon	FALSE	canonical	0	0	junction_13	7.72986837222362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTTCCCTGGCTTGCT	-10	True	NA	5	True	AATAAA	-18	NA	21776269	21837872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
Isoform_130265_3	chr4	+	5790	17	FSM	ENSMUSG00000040455.18	ENSMUST00000040429.12	5861	17	-3	74	-3	-72	multi-exon	FALSE	canonical	3	5	junction_12	7.05226027596827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGATTAGGCCTAGAG	-11	True	NA	6	True	AATAAA	-16	NA	21776268	21837798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
Isoform_130274_108	chr4	+	3087	11	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	476	1222	1	-3	intron_retention	FALSE	canonical	3	310	junction_8	50.2622124463299	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	0	True	NA	10	True	AATAAA	-22	NA	21848058	21875253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
Isoform_130277_327	chr4	+	2848	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	476	1221	1	-2	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTGCACCTTAATTTT	0	True	NA	11	True	AATAAA	-23	NA	21848058	21875254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
Isoform_130278_100	chr4	+	4072	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	465	8	0	0	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGCTGGCTATGA	-11	True	NA	10	True	AATAAA	-10	NA	21848047	21876467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
Isoform_130286_59	chr4	+	3823	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-3	intron_retention	FALSE	canonical	3	402	junction_3	31.0876895964374	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	0	True	NA	10	True	AATAAA	-22	NA	21848058	21875253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
Isoform_13029_46	chr11	-	2162	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	138	0	-42	0	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3814	False	NA	-2	True	AATAAA	-22	NA	55310768	55285325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
Isoform_130290_92	chr4	+	4855	9	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-3	intron_retention	FALSE	canonical	3	402	junction_3	32.8785644455472	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	0	True	NA	10	True	AATAAA	-22	NA	21848058	21875253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
Isoform_130291_14	chr4	+	6088	9	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	402	junction_3	32.8785644455472	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	-11	True	NA	18	True	AATAAA	-18	NA	21848047	21876475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
Isoform_130304_177	chr4	+	2642	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	10	-1	10	1	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGCCATTGTGCT	0	True	NA	12	True	NA	NA	NA	21879682	21912163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
Isoform_130307_499	chr4	+	1242	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	10	1399	10	-1399	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATTTCTGTGTCACCT	0	True	NA	17	True	AATAAA	-19	NA	21879682	21910763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
Isoform_130310_3	chr4	+	1930	6	FSM	ENSMUSG00000028246.14	ENSMUST00000029908.8	2627	6	-227	924	-225	-319	multi-exon	FALSE	canonical	2	5	junction_3	4.02988833592198	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCATTTTTGTTTTCAT	-29	True	NA	NA	False	AAAACA	-29	NA	21931103	21993827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21958443_21958668_21982385_21982503_21993297
Isoform_130312_8	chr4	+	2622	10	FSM	ENSMUSG00000040410.15	ENSMUST00000184582.2	2570	10	-38	-14	7	1	multi-exon	FALSE	canonical	2	2	junction_8	25.9019995414816	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTGTTAAGAATCT	-4	True	NA	NA	False	AATAAA	-42	NA	22357577	22434089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433145_22433259_22433566
Isoform_130313_80	chr4	+	2505	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	39	2	11	1	multi-exon	FALSE	canonical	3	42	junction_4	14.7627063914446	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTGTTAAGAATCT	0	True	NA	NA	False	AATAAA	-42	NA	22357581	22434089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
Isoform_130314_61	chr4	+	2533	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	13	0	-4	0	multi-exon	FALSE	canonical	3	42	junction_4	14.7627063914446	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-26	True	NA	NA	False	AATAAA	-44	NA	22357555	22434091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
Isoform_130315_9	chr4	+	2480	9	FSM	ENSMUSG00000040410.15	ENSMUST00000184455.8	2478	9	1	-3	1	0	multi-exon	FALSE	canonical	2	4	junction_4	22.7156333832011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-10	True	NA	NA	False	AATAAA	-44	NA	22357571	22434091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390713_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
Isoform_130317_8	chr4	+	2841	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	-33	-1458	-22	1458	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTACAGGTTGGTTTGGTA	NA	False	NA	NA	False	AATAAA	-24	NA	24496428	24504871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
Isoform_130318_191	chr4	+	1350	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	-2	2	-2	-2	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTGTCATTCTCGTTG	-7	True	NA	7	True	AATAAA	-16	NA	24496459	24503411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
Isoform_130320_88	chr4	+	4472	24	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-2	0	intron_retention	FALSE	canonical	3	64	junction_15	79.749300001076	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-7	True	NA	NA	False	ATTAAA	-23	NA	24496459	24602950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
Isoform_130321_195	chr4	+	4469	24	FSM	ENSMUSG00000045751.17	ENSMUST00000108222.9	4478	24	9	0	-2	0	multi-exon	FALSE	canonical	3	129	junction_15	74.8650203134992	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-7	True	NA	NA	False	ATTAAA	-23	NA	24496459	24602950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
Isoform_130323_7	chr4	+	4407	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	3	0	intron_retention	FALSE	canonical	3	9	junction_2	77.6077230543839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTCTCTGTGAATA	1	True	NA	NA	False	ATTAAA	-19	NA	24496467	24602946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_24497066_24497837_24497964_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
Isoform_130325_228	chr4	+	2109	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	22	1501	22	-5	multi-exon	FALSE	canonical	3	446	junction_2	23.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTTTTCTGGTTTTTT	-15	True	NA	9	True	AATAAA	-22	NA	24898104	24903500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_24898303_24898572_24898677_24901693
Isoform_130335_38	chr4	+	2396	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-43	5	5	-5	multi-exon	FALSE	canonical	3	446	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTTTTCTGGTTTTTT	-32	True	NA	9	True	AATAAA	-22	NA	24898087	24903500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_24898677_24901693
Isoform_130336_59	chr4	+	1111	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-43	1290	5	-1270	multi-exon	FALSE	canonical	3	446	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTTTGTTCTTTGTA	-32	True	NA	17	True	ATTAAA	-17	NA	24898087	24902215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_24898677_24901693
Isoform_130339_3	chr4	+	4678	6	NNC	ENSMUSG00000028289.13	novel	3187	5	NA	NA	1	1320	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9.94786409235671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	28813131	28875121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28873790_28873812
Isoform_130340_7	chr4	+	3619	17	NIC	ENSMUSG00000028289.13	novel	6746	17	NA	NA	6	-2422	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	5.85768725692999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGATTTCAGACTATTC	6	False	NA	NA	False	AATGAA	-16	NA	28813136	28964393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938765_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
Isoform_130344_6	chr4	+	6758	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	-9	-3	-9	3	multi-exon	TRUE	canonical	2	9	junction_4	5.10170008428563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAAATCCTGTCTCCA	44	False	NA	NA	False	NA	NA	NA	28813121	28967502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
Isoform_130349_30	chr4	+	3263	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-155	2665	-155	1242	multi-exon	TRUE	canonical	3	147	junction_6	19.7680890262564	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCCCTAAGATCTATTT	-10	True	NA	NA	False	AATAAA	-16	NA	31963941	32020802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
Isoform_13035_20	chr11	-	2489	13	NNC	ENSMUSG00000018593.14	novel	1304	12	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_12	285.938549633775	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGGCTGTCCTGTCCCG	579	False	NA	-10	True	AATAAA	-14	NA	55314003	55285333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613_55310682_55310904_55311027_55312068_55312192_55313826
Isoform_130351_102	chr4	+	4675	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	32	1066	9	-1066	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGTATGTAGGAATGGT	8	True	NA	10	True	AATAAA	-19	NA	31964128	32022401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
Isoform_130355_24	chr4	+	4828	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-121	1066	-121	-1066	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGTATGTAGGAATGGT	24	True	NA	10	True	AATAAA	-19	NA	31963975	32022401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
Isoform_130356_17	chr4	+	5771	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	0	2	0	-2	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTACAGTTTACTGAGT	-24	True	NA	20	True	NA	NA	NA	31964096	32023465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
Isoform_130376_227	chr4	+	6586	11	FSM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-29	0	-7	0	multi-exon	FALSE	canonical	3	150	junction_1	42.596243965871	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	-5	True	NA	7	True	AATAAA	-20	NA	32615443	32653265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
Isoform_130378_40	chr4	+	6488	10	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	77.5370878999205	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	10	True	NA	7	True	AATAAA	-20	NA	32615458	32653265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_32615493_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
Isoform_130404_3	chr4	+	6262	33	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	84680	8	-8772	1	3prime_fragment	TRUE	canonical	3	24	junction_1	39.964388444589	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGATCAGGGTTTACT	8683	False	NA	12	True	ATTAAA	-15	NA	32741798	32775199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
Isoform_130405_4	chr4	+	5322	26	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	90721	8	-2731	1	3prime_fragment	FALSE	canonical	3	40	junction_1	35.8150806225534	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGATCAGGGTTTACT	NA	False	NA	12	True	ATTAAA	-15	NA	32747839	32775199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
Isoform_130406_5	chr4	+	4722	24	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	92826	-10	-626	0	3prime_fragment	FALSE	canonical	3	51	junction_5	33.8587078651663	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTGGCTTGGTTTG	NA	False	NA	30	True	ATTAAA	-33	NA	32749944	32775217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
Isoform_130413_6	chr4	+	3813	19	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	97390	2	3938	-2	3prime_fragment	FALSE	canonical	3	60	junction_1	28.6084680548338	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGGGTTTACTTTGGTT	73	False	NA	18	True	ATTAAA	-21	NA	32754508	32775205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
Isoform_130416_6	chr4	+	3561	17	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	100672	2	-5074	-2	3prime_fragment	FALSE	canonical	3	82	junction_3	23.2841650859549	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGGGTTTACTTTGGTT	3355	False	NA	18	True	ATTAAA	-21	NA	32757790	32775205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
Isoform_130418_15	chr4	+	2929	14	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	103726	1	-2020	-1	3prime_fragment	FALSE	canonical	3	98	junction_3	19.0520930220464	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGGGTTTACTTTGGTTT	1727	False	NA	19	True	ATTAAA	-22	NA	32760844	32775206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
Isoform_130430_83	chr4	+	1304	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	30	-869	1	693	multi-exon	FALSE	canonical	3	270	junction_2	3	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	15	True	NA	NA	False	NA	NA	NA	32800282	32802252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_32800336_32800609_32800751_32801142
Isoform_130431_113	chr4	+	4657	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	344	7	-73	-7	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCTCTTGAAGTGG	1	True	NA	-3	True	AATAAA	-12	NA	32983380	33022173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
Isoform_130432_24	chr4	+	4734	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	267	7	149	-7	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCTCTTGAAGTGG	8	True	NA	-3	True	AATAAA	-12	NA	32983303	33022173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
Isoform_130435_11	chr4	+	5058	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	-58	8	-58	-8	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAACCTCTTGAAGTG	NA	False	NA	-4	True	AATAAA	-11	NA	32982978	33022172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
Isoform_130440_13	chr4	+	1806	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	-21	3223	-21	139	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTGAGAGCCACTGTA	-8	True	NA	16	True	AATAAA	-31	NA	32983015	33018957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
Isoform_130447_14	chr4	+	3499	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	22	9	22	-9	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTAAGTTATTTACTG	-10	True	NA	19	True	AATAAA	-29	NA	33031437	33052354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
Isoform_130448_18	chr4	+	1122	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	72	2336	-40	-2336	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGATTGTTTACAAAAAGA	40	True	NA	23	True	ATTAAA	-23	NA	33031487	33050027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
Isoform_130451_5	chr4	+	1102	7	NIC	ENSMUSG00000028277.14	novel	3530	8	NA	NA	-27	-2335	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	28.5214344348636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATTGTTTACAAAAAGAT	-59	True	NA	24	True	ATTAAA	-24	NA	33031388	33050028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33049681
Isoform_130454_9	chr4	+	3325	7	NIC	ENSMUSG00000028277.14	novel	3530	8	NA	NA	-35	-8	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	28.5214344348636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAAGTTATTTACTGG	45	True	NA	20	True	AATAAA	-30	NA	33031492	33052355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33049681
Isoform_130455_37	chr4	+	1872	6	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	19822	0	19822	0	3prime_fragment	FALSE	canonical	3	14	junction_2	4.22374241638857	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGATGTCATCACTGACT	NA	False	NA	8	True	AATAAA	-15	NA	33152342	33163588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
Isoform_130456_6	chr4	+	2863	5	FSM	ENSMUSG00000054679.9	ENSMUST00000108159.2	829	5	15	-2049	15	2	multi-exon	FALSE	canonical	2	4	junction_3	2.44948974278318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTGATGTGCTGTCCTG	-12	True	NA	NA	False	AATAAA	-15	NA	33209277	33233342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_33209371_33223567_33223673_33225764_33225869_33226027_33226170_33230923
Isoform_130457_4	chr4	+	3035	4	NIC	ENSMUSG00000054679.9	novel	829	5	NA	NA	4	4	intron_retention	FALSE	canonical	3	8	junction_3	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTGTCCTGAC	-23	True	NA	NA	False	AATAAA	-17	NA	33209266	33233344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_33209371_33223567_33223673_33225764_33226170_33230923
Isoform_130459_275	chr4	+	2419	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	34	1704	17	-4	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGAAGTTCTTCTGGT	-2	True	NA	9	True	ATTAAA	-22	NA	33310344	33500910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
Isoform_13046_27	chr11	-	2184	10	FSM	ENSMUSG00000018593.14	ENSMUST00000214685.2	1269	10	6	-921	6	0	multi-exon	FALSE	canonical	3	36	junction_9	224.039568815559	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	579	False	NA	-2	True	AATAAA	-22	NA	55314003	55285325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55313826
Isoform_130460_231	chr4	+	4124	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	33	0	16	0	multi-exon	TRUE	canonical	3	214	junction_12	34.6965256025569	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTTCCTGTCTCG	-3	True	NA	11	True	AATAAA	-18	NA	33310343	33502614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
Isoform_130465_18	chr4	+	4301	17	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	92.7669922103223	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACACCTGTGTCTTTCCT	-2	True	NA	5	True	AATAAA	-12	NA	33310344	33502608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
Isoform_130470_525	chr4	+	1716	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-319	0	-319	0	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGTTTCCGAATTG	-7	True	NA	13	True	AATAAA	-14	NA	34550617	34566908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
Isoform_130479_15	chr4	+	5221	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-288	-3536	-288	3536	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTCTTGTCATGAAAGA	24	True	NA	NA	False	ATTAAA	-26	NA	34550648	34570444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
Isoform_130486_11	chr4	+	2305	19	ISM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	-12	4	-12	0	intron_retention	TRUE	canonical	3	576	junction_1	52.339495980628	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	-24	True	NA	8	True	AATAGA	-23	NA	34614944	34660163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490
Isoform_130487_687	chr4	+	1862	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	4	2	0	2	multi-exon	FALSE	canonical	3	576	junction_1	51.5992441268264	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	-8	True	NA	10	True	AATAGA	-25	NA	34614960	34660165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
Isoform_130490_79	chr4	+	1950	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_9	178.38710715744	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTAGTAGTGTGT	6	True	NA	9	True	AATAGA	-24	NA	34614974	34660164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
Isoform_130493_10	chr4	+	1859	20	FSM	ENSMUSG00000028292.15	ENSMUST00000142045.8	1843	20	-13	-3	0	-1	multi-exon	FALSE	canonical	3	67	junction_4	142.027152021567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTAGTAGTGTGTTT	-8	True	NA	11	True	AATAGA	-26	NA	34614960	34660166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630476_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
Isoform_130499_566	chr4	+	3479	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	349	4	349	-4	multi-exon	FALSE	canonical	3	234	junction_5	35.2306684580353	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGTGTTGGCTTTGGAG	23	True	NA	5	True	ATTAAA	-13	NA	40143429	40198334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
Isoform_13050_813	chr11	-	450	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	91	0	49	0	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTGGTGTATGTT	NA	False	NA	-7	True	AATAAA	-20	NA	55351974	55337466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
Isoform_130500_284	chr4	+	3510	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	319	3	319	-3	multi-exon	FALSE	canonical	3	234	junction_5	35.2306684580353	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTTGGCTTTGGAGT	-7	True	NA	6	True	ATTAAA	-14	NA	40143399	40198335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
Isoform_130502_28	chr4	+	3870	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	-41	3	-41	-3	multi-exon	TRUE	canonical	3	234	junction_5	35.2306684580353	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTTGGCTTTGGAGT	NA	False	NA	6	True	ATTAAA	-14	NA	40143039	40198335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
Isoform_13051_575	chr11	-	473	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	68	0	26	0	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTGGTGTATGTT	NA	False	NA	-7	True	AATAAA	-20	NA	55351997	55337466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
Isoform_130512_41	chr4	+	318	2	FSM	ENSMUSG00000028407.5	ENSMUST00000129758.3	1044	2	8	718	8	-4	multi-exon	FALSE	canonical	3	97	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCGTGTGGCCTTTTG	7	True	NA	3	True	AGTAAA	-13	NA	40269586	40270222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40269720_40270037
Isoform_130520_481	chr4	+	2258	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	54	1064	-25	0	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTGTCACTGCAGGC	-3	True	NA	5	True	AATATA	-17	NA	40722533	40733900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_130521_154	chr4	+	2304	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	8	1064	8	0	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTGTCACTGCAGGC	1	True	NA	5	True	AATATA	-17	NA	40722487	40733900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_130522_1499	chr4	+	1464	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	54	1858	-25	-794	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-3	True	NA	12	True	AATAAA	-18	NA	40722533	40733106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_130523_479	chr4	+	1529	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	-11	1858	-11	-794	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-18	True	NA	12	True	AATAAA	-18	NA	40722468	40733106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_130539_38	chr4	+	1437	9	NIC	ENSMUSG00000028410.14	novel	5622	9	NA	NA	-1	-794	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	944.437919809979	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-28	True	NA	12	True	AATAAA	-18	NA	40722928	40733106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_40723002_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_130543_71	chr4	+	1572	9	FSM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	7	4043	-1	-794	multi-exon	FALSE	canonical	3	76	junction_1	940.162278213182	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-28	True	NA	12	True	AATAAA	-18	NA	40722928	40733106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_130558_113	chr4	+	1394	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	119	6	119	-6	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATGTAATTGTAGTAT	0	True	NA	8	True	AATAAA	-10	NA	40948525	40965297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
Isoform_130559_476	chr4	+	1367	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	146	6	146	-6	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATGTAATTGTAGTAT	-10	True	NA	8	True	AATAAA	-10	NA	40948552	40965297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
Isoform_130562_18	chr4	+	1082	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	92	345	92	-345	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATGGTAGTGTAAGTA	0	True	NA	24	True	ATTAAA	-21	NA	40948498	40964958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
Isoform_130563_9	chr4	+	1796	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	137	-414	137	414	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTTTCTTGTAAGTC	-19	True	NA	NA	False	AATAAA	-17	NA	40948543	40965717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
Isoform_130573_33	chr4	+	3553	16	FSM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	64	0	64	0	multi-exon	FALSE	canonical	3	26	junction_15	162.820473733086	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-22	True	NA	16	True	NA	NA	NA	40970969	41012608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011526
Isoform_130575_629	chr4	+	3017	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	68	1264	68	-1	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTCTTGTCAGGCT	-18	True	NA	15	True	NA	NA	NA	40970973	41012607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
Isoform_130578_37	chr4	+	3390	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	66	893	66	370	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTAGCCTCCTGTGATA	-20	True	NA	NA	False	NA	NA	NA	40970971	41012978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
Isoform_130580_28	chr4	+	4283	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	66	0	66	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCCTCTTCATTTTT	-20	True	NA	NA	False	AATAAA	-15	NA	40970971	41013871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
Isoform_130586_223	chr4	+	4527	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	66	1	66	-1	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTATTTTGTTTATTGA	-20	True	NA	33	True	ATTAAA	-18	NA	40970971	41025992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
Isoform_130589_24	chr4	+	5310	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	98	-814	98	814	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATGTAACATTTTT	12	True	NA	NA	False	AATAAA	-35	NA	40971003	41026807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
Isoform_130593_47	chr4	+	3359	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-13	True	NA	16	True	NA	NA	NA	40970978	41012608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
Isoform_13060_22	chr11	-	2599	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_12	137.86692837961	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409461	57373818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404899_57405118_57409398
Isoform_130605_376	chr4	+	2068	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	-234	1766	-234	578	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGAGCACTTGGTTGCTA	-5	True	NA	30	True	AATAAA	-19	NA	41135508	41191614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
Isoform_130606_28	chr4	+	2138	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	-304	1766	-304	578	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGAGCACTTGGTTGCTA	NA	False	NA	30	True	AATAAA	-19	NA	41135438	41191614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
Isoform_130608_18	chr4	+	3825	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	-234	9	-234	-9	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAATACCTGTATTG	-5	True	NA	NA	False	AATAAA	-8	NA	41135508	41193371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
Isoform_130616_431	chr4	+	2654	7	FSM	ENSMUSG00000028437.15	ENSMUST00000072866.12	3456	7	43	759	-9	0	multi-exon	FALSE	canonical	3	286	junction_5	24.6981780704569	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCTGCCTTAACCTC	-8	True	NA	5	True	AATAAA	-14	NA	41349038	41389766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
Isoform_130629_7	chr4	+	2343	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	1	-1499	1	1499	multi-exon	FALSE	canonical	3	137	junction_1	26.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAACAA	5	True	NA	NA	False	NA	NA	NA	41465151	41482425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_41465181_41477513_41477648_41480245
Isoform_130630_155	chr4	+	847	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	-3	1	-3	-1	multi-exon	FALSE	canonical	3	137	junction_1	26.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGATGCTTTCTTGGA	1	True	NA	31	True	AATAAA	-27	NA	41465147	41480925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_41465181_41477513_41477648_41480245
Isoform_130631_9	chr4	+	900	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	-68	13	-68	-13	multi-exon	FALSE	canonical	3	137	junction_1	26.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCCTTTCAACCTGTGA	NA	False	NA	19	True	AATAAA	-15	NA	41465082	41480913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_41465181_41477513_41477648_41480245
Isoform_130633_28	chr4	+	1303	11	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-250	-15	combination_of_known_junctions	FALSE	canonical	2	43	junction_2	83.1877394812481	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	15	False	NA	17	True	AATAAA	-18	NA	41755507	41758680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
Isoform_130634_8	chr4	+	1439	10	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	245	-9	intron_retention	FALSE	canonical	2	43	junction_2	87.4838962253364	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTGACACCAGAGGAG	5	True	NA	23	True	AATAAA	-24	NA	41755497	41758686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
Isoform_130635_9	chr4	+	1538	9	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-237	-14	intron_retention	FALSE	canonical	2	43	junction_2	92.4836978877899	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTTTTCTGACACCAG	0	True	NA	18	True	AATAAA	-19	NA	41755520	41758681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
Isoform_130636_387	chr4	+	1314	11	FSM	ENSMUSG00000036073.19	ENSMUST00000084695.12	1595	11	277	4	252	-4	multi-exon	FALSE	canonical	2	236	junction_6	31.3438989278615	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACACCAGAGGAGTAGTG	12	False	NA	28	True	AATAAA	-29	NA	41755504	41758691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
Isoform_130639_8	chr4	+	1423	10	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	252	-15	intron_retention	FALSE	canonical	2	236	junction_5	29.8009859808715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	12	False	NA	17	True	AATAAA	-18	NA	41755504	41758680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
Isoform_13064_111	chr11	-	2549	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	3	5	3	-5	multi-exon	FALSE	canonical	3	63	junction_13	118.75144346678	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATAAGCGTGGTATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	57409440	57373823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
Isoform_130642_6	chr4	+	2628	5	NIC	ENSMUSG00000036052.15	novel	3302	4	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	12.7549010188241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATAGCCTCTGCGCAG	5	True	NA	NA	False	AATAAA	-9	NA	42949897	42958724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_42950005_42950475_42950743_42953140_42953386_42956525_42957128_42957317
Isoform_130643_105	chr4	+	2365	4	FSM	ENSMUSG00000036052.15	ENSMUST00000098112.9	3093	4	27	701	-20	1	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATAGCCTCTGCGCAG	1	True	NA	NA	False	AATAAA	-9	NA	42949893	42958724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_42950005_42953140_42953386_42956525_42957128_42957317
Isoform_130644_4	chr4	+	1346	4	FSM	ENSMUSG00000036052.15	ENSMUST00000098112.9	3093	4	0	1747	0	-1045	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTTCCTGTTCCCGA	-26	True	NA	NA	False	NA	NA	NA	42949866	42957678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_42950005_42953140_42953386_42956525_42957128_42957317
Isoform_130646_6	chr4	+	2593	4	FSM	ENSMUSG00000036052.15	ENSMUST00000084662.12	3302	4	8	701	8	1	multi-exon	FALSE	canonical	1	1	junction_1	12.4721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATAGCCTCTGCGCAG	-4	True	NA	NA	False	AATAAA	-9	NA	42950403	42958724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_42950743_42953140_42953386_42956525_42957128_42957317
Isoform_130647_3	chr4	+	2124	8	FSM	ENSMUSG00000028456.19	ENSMUST00000171234.2	3617	8	-16	1509	-1	923	multi-exon	FALSE	canonical	3	22	junction_5	2.99659670905758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAAGTTGGCAACTACT	17	False	NA	NA	False	ATTAAA	-16	NA	43058967	43167045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743
Isoform_130648_17	chr4	+	6367	39	FSM	ENSMUSG00000028456.19	ENSMUST00000079978.13	6354	39	-13	0	3	0	multi-exon	FALSE	canonical	3	15	junction_23	5.54732847284128	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGAGTCTGGAATTC	5	True	NA	12	True	AATAAA	-14	NA	43058955	43264871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
Isoform_130649_16	chr4	+	6363	39	NIC	ENSMUSG00000028456.19	novel	5034	40	NA	NA	3	-1	combination_of_known_junctions	TRUE	canonical	3	7	junction_23	6.06086396664375	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGGAGTCTGGAATT	5	True	NA	11	True	AATAAA	-13	NA	43058955	43264870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
Isoform_13065_287	chr11	-	1768	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-21	-14	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	57409464	57374631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
Isoform_130650_3	chr4	+	5259	13	NIC	ENSMUSG00000035969.16	novel	5300	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	14.631349523844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	10	True	NA	17	True	AATAAA	-19	NA	43382069	43427088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_43382200_43413004_43413055_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
Isoform_130651_18	chr4	+	5292	11	ISM	ENSMUSG00000035969.16	ENSMUST00000035645.12	5300	12	89	1	-2	-1	intron_retention	FALSE	canonical	3	32	junction_5	4.72863616701476	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATTTTCTTTGTGCCCC	8	True	NA	16	True	AATAAA	-18	NA	43382067	43427087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227
Isoform_130653_38	chr4	+	5221	12	FSM	ENSMUSG00000035969.16	ENSMUST00000035645.12	5300	12	78	1	0	-1	multi-exon	FALSE	canonical	3	25	junction_11	6.00550711451409	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATTTTCTTTGTGCCCC	-3	True	NA	16	True	AATAAA	-18	NA	43382056	43427087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
Isoform_130655_4	chr4	+	3107	11	NIC	ENSMUSG00000035969.16	novel	5300	12	NA	NA	5	-6	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	12.4422666745252	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGCCATTTTCTTTGT	15	True	NA	11	True	AATAAA	-13	NA	43382074	43427082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_43382200_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
Isoform_13066_524	chr11	-	2555	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGCGTGGTATTTAATA	NA	False	NA	NA	False	AATAAA	-19	NA	57409440	57373820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
Isoform_130660_30	chr4	+	2777	10	FSM	ENSMUSG00000028458.13	ENSMUST00000060864.13	3947	10	1169	1	-213	-1	multi-exon	FALSE	canonical	3	35	junction_4	6.61647774709307	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGACTGTCATTAGCTCT	-9	True	NA	4	True	AATAAA	-16	NA	43443107	43448063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
Isoform_130662_6	chr4	+	3363	10	FSM	ENSMUSG00000028458.13	ENSMUST00000060864.13	3947	10	314	270	314	0	multi-exon	FALSE	canonical	3	35	junction_4	6.61647774709307	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGCGCCCTCCCCTGAC	-23	True	NA	39	True	AATAAA	-36	NA	43442252	43447794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
Isoform_130663_3	chr4	+	3630	10	FSM	ENSMUSG00000028458.13	ENSMUST00000060864.13	3947	10	314	3	314	-3	multi-exon	FALSE	canonical	3	35	junction_4	6.61647774709307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGACTGTCATTAGCT	-23	True	NA	2	True	AATAAA	-14	NA	43442252	43448061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
Isoform_130664_14	chr4	+	886	5	FSM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	-22	1	5	-1	multi-exon	FALSE	canonical	3	315	junction_4	11.5433963806152	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGTGTTCCTCTGTGCT	-21	True	NA	13	True	AGTAAA	-44	NA	43493366	43495920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508
Isoform_130665_274	chr4	+	802	6	FSM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	15	0	0	0	multi-exon	FALSE	canonical	3	301	junction_5	16.9162643630324	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-11	True	NA	14	True	AGTAAA	-45	NA	43493376	43495921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
Isoform_130666_4	chr4	+	2312	4	NIC	ENSMUSG00000028461.13	novel	865	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	315	junction_3	11.7284080571728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-11	True	NA	14	True	AGTAAA	-45	NA	43493376	43495921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_43493537_43493607_43495256_43495341_43495433_43495508
Isoform_130668_70	chr4	+	1393	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	296	195	-185	68	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCCTTTGCTCACGT	-14	True	NA	12	True	AATAAA	-14	NA	43562627	43566865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_130669_37	chr4	+	1561	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	324	-1	-157	1	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTTACTGGCACAG	14	True	NA	6	True	AATAAA	-15	NA	43562655	43567061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_130671_5	chr4	+	1917	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	-230	197	-230	66	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTGGCCTTTGCTCAC	6178	False	NA	10	True	AATAAA	-12	NA	43562101	43566863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_130673_3	chr4	+	1611	8	NIC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-198	-64	intron_retention	FALSE	canonical	3	77	junction_4	10.656032113698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTTGAATACTTCATC	-27	True	NA	-59	True	AATAGA	-15	NA	43562614	43566996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_43562960_43563049_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_130674_4	chr4	+	1479	9	FSM	ENSMUSG00000028468.16	ENSMUST00000107886.9	5888	9	10	4399	-10	-42	multi-exon	FALSE	canonical	1	1	junction_1	1.96452920568771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACATGCCCACCATGGC	-16	True	NA	NA	False	NA	NA	NA	43578724	43583088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43579004_43579374_43579510_43579886_43580024_43580295_43580380_43580476_43580627_43580863_43581011_43581187_43581316_43581486_43581677_43582859
Isoform_130675_4	chr4	+	5311	14	NNC	ENSMUSG00000078716.11	novel	5102	13	NA	NA	-13	-3	intron_retention	TRUE	non_canonical	0	0	junction_13	3.68910117177901	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTACTCCTTCCCTTA	-3	True	NA	NA	False	NA	NA	NA	43669273	43692665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_43670035_43673899_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690026_43691419_43691438
Isoform_130678_74	chr4	+	4430	21	FSM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	2	1	2	-1	multi-exon	FALSE	canonical	3	46	junction_14	9.31812749429841	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGTTGTGTCTTTACTG	-10	True	NA	NA	False	AATGAA	-18	NA	43875531	43944805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
Isoform_130679_88	chr4	+	4381	21	FSM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	-5	57	-5	4	multi-exon	TRUE	canonical	3	46	junction_14	9.31812749429841	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGTACTTCCAAGCAA	-17	True	NA	NA	False	AATAAA	-16	NA	43875524	43944749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
Isoform_130681_356	chr4	+	2034	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	284	2	-7	-2	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTCCTCTAATGCGA	-22	True	NA	34	True	AATAAA	-19	NA	43957684	43979116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
Isoform_130683_30	chr4	+	2245	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	74	1	74	-1	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTCCTCTAATGCGAT	-4	True	NA	35	True	AATAAA	-20	NA	43957474	43979117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
Isoform_130691_69	chr4	+	1047	5	FSM	ENSMUSG00000028478.19	ENSMUST00000107845.4	1031	5	-16	0	-8	0	multi-exon	FALSE	canonical	3	59	junction_1	565.255860208455	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	-8	True	NA	21	True	AATAAA	-21	NA	44012669	44032846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_44013003_44018812_44018851_44019873_44019992_44025448_44025561_44032400
Isoform_130695_1465	chr4	+	1053	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	27	-1	-8	0	multi-exon	FALSE	canonical	3	1242	junction_1	75.1631558677521	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	-8	True	NA	21	True	AATAAA	-21	NA	44012669	44032846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
Isoform_130696_208	chr4	+	1081	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	-1	-1	-1	0	multi-exon	FALSE	canonical	3	1242	junction_1	75.1631558677521	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	8195	False	NA	21	True	AATAAA	-21	NA	44012641	44032846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
Isoform_130703_953	chr4	+	2541	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	34	380	34	-380	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGACTATTTGGAGTG	-10	True	NA	25	True	AATAAA	-26	NA	44300909	44364295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
Isoform_130704_69	chr4	+	2922	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	34	-1	34	1	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAGCACTGTTTCTG	-10	True	NA	NA	False	ATTAAA	-12	NA	44300909	44364676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
Isoform_130711_26	chr4	+	2368	16	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	40	-379	combination_of_known_splicesites	FALSE	canonical	2	9	junction_8	119.239926199239	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGACTATTTGGAGTGT	-4	True	NA	26	True	AATAAA	-27	NA	44300915	44364296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
Isoform_130722_18	chr4	+	2488	9	FSM	ENSMUSG00000035649.18	ENSMUST00000107824.9	2503	9	21	-6	1	6	multi-exon	FALSE	canonical	3	29	junction_2	42.9270820694815	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTGTTTATTGTTA	11	True	NA	NA	False	AATAAA	-20	NA	44756588	44932209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_44756693_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
Isoform_130723_9	chr4	+	2502	9	NIC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	46.0867049700887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTGTTTATTGTTA	1	True	NA	NA	False	AATAAA	-20	NA	44756578	44932209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_44756697_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
Isoform_130726_7	chr4	+	1070	8	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	0	1536	0	188	5prime_fragment	FALSE	canonical	3	277	junction_3	35.5045268743498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGAAGTGGATGCGTTT	-31	True	NA	NA	False	AATAGA	-39	NA	44981394	44989198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919
Isoform_130727_430	chr4	+	1245	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	2	33	2	-33	multi-exon	FALSE	canonical	3	277	junction_3	33.5326333591622	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTATGACTTGGGG	-29	True	NA	15	True	ATTAAA	-18	NA	44981396	44990701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
Isoform_130728_34	chr4	+	1273	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	2	5	2	-5	multi-exon	FALSE	canonical	3	277	junction_3	33.5326333591622	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCATCTTTTGTGTTTG	-29	True	NA	8	True	NA	NA	NA	44981396	44990729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
Isoform_130732_375	chr4	+	1609	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	50	1327	-29	0	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCCTTTCATGTTGC	-15	True	NA	19	True	ATTAAA	-24	NA	45018632	45032365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
Isoform_130735_17	chr4	+	3506	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	70	-590	-9	590	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTGTAAGTACTTGCT	5	True	NA	NA	False	AATATA	-22	NA	45018652	45034282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
Isoform_13074_21	chr11	-	748	4	FSM	ENSMUSG00000087165.8	ENSMUST00000152790.8	714	4	-30	-4	-30	4	multi-exon	FALSE	canonical	3	14	junction_3	7.84573486395988	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTCAGTGATTAGCA	NA	False	NA	1	True	NA	NA	NA	57692273	57686320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_57686621_57686851_57687000_57687137_57687224_57692059
Isoform_130741_4	chr4	+	1397	9	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	3	343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	99.5583214754046	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGCCGATTTCCACC	-5	True	NA	8	True	CATAAA	-17	NA	45297157	45315485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_45297196_45300416_45300628_45301225_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
Isoform_130743_92	chr4	+	1387	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	32	645	4	344	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCCGATTTCCACCA	-4	True	NA	9	True	CATAAA	-18	NA	45297158	45315486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
Isoform_130746_11	chr4	+	2987	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	32	-955	4	955	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTCCTTTTCTGGA	-4	True	NA	NA	False	AATAAA	-22	NA	45297158	45317086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
Isoform_130747_4	chr4	+	1993	8	NIC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	6	344	intron_retention	FALSE	canonical	3	203	junction_1	44.634113429446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCCGATTTCCACCA	-2	True	NA	9	True	CATAAA	-18	NA	45297160	45315486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_45297196_45300416_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
Isoform_130749_41	chr4	+	2203	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	1	5046	1	-243	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTGATTGAAAAAGTTCA	3	True	NA	12	True	AATAAA	-25	NA	45342101	45374713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
Isoform_130752_12	chr4	+	7217	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	-3	36	-3	-36	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTCACTACGTGTGGC	-1	True	NA	14	True	NA	NA	NA	45342097	45379723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
Isoform_130755_4	chr4	+	2238	6	NIC	ENSMUSG00000035572.17	novel	7250	7	NA	NA	-3	-14	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	28.039971469315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAAGATCTCCAGCGTG	-1	True	NA	NA	False	NA	NA	NA	45342097	45374942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_45342728_45348105_45348220_45370305_45370509_45372663_45372775_45372923_45373070_45373908
Isoform_130756_172	chr4	+	2249	2	FSM	ENSMUSG00000035561.6	ENSMUST00000044384.5	2298	2	47	2	47	-2	multi-exon	FALSE	canonical	3	42	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTATCACTGTTTTCC	-36	True	NA	10	True	ATTAAA	-24	NA	45799068	45804602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_45799170_45802454
Isoform_130757_3	chr4	+	2428	2	FSM	ENSMUSG00000035561.6	ENSMUST00000044384.5	2298	2	-133	3	-133	-3	multi-exon	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTATCACTGTTTTC	-17	True	NA	9	True	ATTAAA	-23	NA	45798888	45804601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_45799170_45802454
Isoform_130758_4	chr4	+	3598	15	ISM	ENSMUSG00000035517.18	ENSMUST00000102929.2	3716	17	62	8031	62	-8031	5prime_fragment	FALSE	canonical	0	0	junction_9	2.71052370871575	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTCTGTGCTAAAAAT	-12	True	NA	NA	False	TATAAA	-25	NA	45972294	46026730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023506_46025656
Isoform_130759_7	chr4	+	3630	17	NNC	ENSMUSG00000035517.18	novel	3716	17	NA	NA	81	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2.88787876303698	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCTGATGTCTTAGTT	7	True	NA	NA	False	AATAAA	-14	NA	45972313	46034756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023502_46025652_46026160_46029646_46029808_46034295
Isoform_13076_56	chr11	-	4852	28	FSM	ENSMUSG00000037275.15	ENSMUST00000102711.9	4919	28	67	0	67	0	multi-exon	FALSE	canonical	3	91	junction_2	45.8600782424762	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTCTCGTTCTGTGG	NA	False	NA	-34	True	TATAAA	-12	NA	58059298	58012115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_130762_142	chr4	+	3101	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-93	2	-93	-2	multi-exon	TRUE	canonical	3	296	junction_19	36.3529529761015	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGGAGTCATGGTTT	17	True	NA	19	True	AATAAA	-19	NA	46138519	46172401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
Isoform_130763_451	chr4	+	2866	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	142	2	142	-2	multi-exon	FALSE	canonical	3	296	junction_19	36.3529529761015	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGGAGTCATGGTTT	1	True	NA	19	True	AATAAA	-19	NA	46138754	46172401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
Isoform_130764_205	chr4	+	2887	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	120	3	120	-3	multi-exon	FALSE	canonical	3	296	junction_19	36.3529529761015	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	-21	True	NA	18	True	AATAAA	-18	NA	46138732	46172400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
Isoform_130797_1603	chr4	+	1655	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	58	3	58	-3	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	6	True	NA	5	True	AATAAA	-17	NA	46450959	46472654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
Isoform_130798_4433	chr4	+	1547	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	35	134	35	-134	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	4433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	-17	True	NA	19	True	AATAAA	-15	NA	46450936	46472523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
Isoform_130799_233	chr4	+	1736	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	-24	4	-24	-4	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCTAGTTGTACTCTC	-2	True	NA	4	True	AATAAA	-16	NA	46450877	46472653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
Isoform_13080_95	chr11	-	4897	28	FSM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	26	-1	26	1	multi-exon	FALSE	canonical	3	91	junction_2	43.3607067704434	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTCTCGTTCTGTGGG	NA	False	NA	-33	True	TATAAA	-13	NA	58059339	58012114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_130806_640	chr4	+	1610	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	-24	130	-24	-130	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTCATGCTTTTCTT	-2	True	NA	23	True	AATAAA	-19	NA	46450877	46472527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
Isoform_13082_10	chr11	-	5178	28	FSM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	26	-282	26	282	multi-exon	FALSE	canonical	3	91	junction_2	43.3607067704434	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTTGGGGTCATAGA	NA	False	NA	-3	True	AATAAA	-22	NA	58059339	58011833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_13083_7	chr11	-	6183	28	FSM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	26	-1287	26	-1	multi-exon	FALSE	canonical	3	91	junction_2	43.3607067704434	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCTCTTTTCTTTATC	NA	False	NA	-1	True	ATTAAA	-20	NA	58059339	58010828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_130830_89	chr4	+	2092	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	77	10	6	-10	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCTGTACTTACTTTG	9	True	NA	4	True	NA	NA	NA	46489324	46503622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
Isoform_130831_37	chr4	+	2154	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	26	-1	26	1	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTTGATGTGTGTGTA	NA	False	NA	15	True	NA	NA	NA	46489273	46503633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
Isoform_130836_786	chr4	+	1148	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	73	958	2	-958	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTGCTGTCCAGT	5	True	NA	12	True	AATAAA	-25	NA	46489320	46502674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
Isoform_130840_37	chr4	+	2252	10	FSM	ENSMUSG00000039774.13	ENSMUST00000045041.12	2288	10	9	27	-5	0	multi-exon	FALSE	canonical	3	17	junction_3	5.3748384988657	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTGATGCCACAGCCAA	-24	True	NA	6	True	AATAAA	-16	NA	47091917	47123043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_47092329_47104099_47104270_47108390_47108581_47111455_47111642_47112321_47112440_47113727_47113905_47117903_47118036_47119514_47119629_47120361_47120509_47122436
Isoform_130843_6	chr4	+	5889	10	NIC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	82.4685499350817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAACATTCTTTTCTGG	-2	True	NA	32	True	AATAAA	-23	NA	47353219	47414930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_47353397_47382912_47383045_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
Isoform_130846_230	chr4	+	5748	9	FSM	ENSMUSG00000007613.16	ENSMUST00000007757.15	5756	9	1	7	1	-7	multi-exon	FALSE	canonical	3	114	junction_2	37.2623721064561	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATGGCAACATTCTT	1	True	NA	26	True	AATAAA	-17	NA	47353222	47414924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
Isoform_130848_181	chr4	+	5722	9	FSM	ENSMUSG00000007613.16	ENSMUST00000044234.14	2861	9	-68	-2793	17	-5	multi-exon	FALSE	canonical	3	99	junction_2	41.6435769357052	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATGGCAACATTCTTTT	-10	True	NA	28	True	AATAAA	-19	NA	47353238	47414926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
Isoform_13085_72	chr11	-	4856	28	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	67	1	combination_of_known_junctions	FALSE	canonical	3	119	junction_10	38.087942423091	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTCTCGTTCTGTGGG	NA	False	NA	-33	True	TATAAA	-13	NA	58059298	58012114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_130850_1268	chr4	+	548	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	12	4	12	-4	multi-exon	FALSE	canonical	3	2329	junction_2	60.4225859169308	1268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTGGTTGCCTGTGCTT	-10	True	NA	NA	False	AATAAA	-21	NA	47474669	47483238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
Isoform_130856_45	chr4	+	2383	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	-5	3392	-2	884	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGAGTATTTATTTCTT	0	True	NA	14	True	ATTAAA	-11	NA	48124920	48183115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
Isoform_130858_8	chr4	+	5766	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	0	4	0	-4	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGAATTCCTGTTGTA	5	True	NA	NA	False	AATAAA	-21	NA	48124925	48186503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
Isoform_130859_14	chr4	+	2473	8	NIC	ENSMUSG00000061455.14	novel	5770	8	NA	NA	2	882	intron_retention	FALSE	canonical	2	7	junction_1	13.490737563232	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATTGAGTATTTATTTC	16	True	NA	12	True	ATTAAA	-9	NA	48124936	48183113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_48125067_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
Isoform_130860_5	chr4	+	1552	3	FSM	ENSMUSG00000039693.12	ENSMUST00000061135.8	1589	3	37	0	37	0	multi-exon	FALSE	canonical	3	23	junction_1	140.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	55	False	NA	14	True	NA	NA	NA	48539971	48561918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48539998_48552379_48552831_48560843
Isoform_130863_95	chr4	+	1640	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	81	-343	81	1	multi-exon	FALSE	canonical	3	126	junction_1	89	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTACACTGTGTATGTTT	0	True	NA	16	True	NA	NA	NA	48540159	48561920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48540272_48552379_48552831_48560843
Isoform_130865_46	chr4	+	1719	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	0	-341	0	0	multi-exon	FALSE	canonical	3	126	junction_1	89	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	2	True	NA	14	True	NA	NA	NA	48540078	48561918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48540272_48552379_48552831_48560843
Isoform_130866_9	chr4	+	1879	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	-160	-341	-16	0	multi-exon	FALSE	canonical	3	126	junction_1	89	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	2	True	NA	14	True	NA	NA	NA	48539918	48561918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48540272_48552379_48552831_48560843
Isoform_13087_17	chr11	-	6198	28	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	13	1	combination_of_known_junctions	TRUE	canonical	3	119	junction_10	38.087942423091	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCTTTTCTTTATCAA	NA	False	NA	1	True	ATTAAA	-22	NA	58059352	58010826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_130875_142	chr4	+	1641	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	-45	1	-45	0	multi-exon	FALSE	canonical	3	153	junction_1	75.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	-7	True	NA	14	True	NA	NA	NA	48540453	48561918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48540569_48552379_48552831_48560843
Isoform_130877_7	chr4	+	1842	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	-246	1	174	0	multi-exon	FALSE	canonical	3	153	junction_1	75.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	93	False	NA	14	True	NA	NA	NA	48540252	48561918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48540569_48552379_48552831_48560843
Isoform_130881_579	chr4	+	2463	10	FSM	ENSMUSG00000028347.15	ENSMUST00000130834.8	1426	10	-376	-661	1	0	multi-exon	FALSE	canonical	3	335	junction_4	69.1178989163971	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	13	True	NA	NA	False	AATATA	-15	NA	48585174	48663131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
Isoform_130884_94	chr4	+	2539	10	FSM	ENSMUSG00000028347.15	ENSMUST00000130834.8	1426	10	-454	-659	-77	-2	multi-exon	FALSE	canonical	3	335	junction_4	69.1178989163971	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTCTGCTTTGTGTGCT	-11	True	NA	NA	False	AATATA	-13	NA	48585096	48663129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
Isoform_130888_114	chr4	+	2454	10	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_7	136.341075574784	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	16	True	NA	NA	False	AATATA	-15	NA	48585177	48663131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650300_48650419_48658773_48658933_48662000
Isoform_130891_201	chr4	+	2460	10	FSM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	1	0	1	0	multi-exon	FALSE	canonical	3	169	junction_4	114.355952842942	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	13	True	NA	NA	False	AATATA	-15	NA	48585174	48663131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
Isoform_130894_46	chr4	+	2500	10	FSM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	-41	2	-41	-2	multi-exon	FALSE	canonical	3	169	junction_4	114.355952842942	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTCTGCTTTGTGTGCT	25	True	NA	NA	False	AATATA	-13	NA	48585132	48663129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
Isoform_13090_99	chr11	-	4900	28	FSM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	26	1287	26	1	multi-exon	FALSE	canonical	3	150	junction_10	34.9266525198369	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTCTCGTTCTGTGGG	NA	False	NA	-33	True	TATAAA	-13	NA	58059339	58012114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_130900_49	chr4	+	2452	10	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_7	160.121096149442	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTCTGCTTTGTGTGCT	13	True	NA	NA	False	AATATA	-13	NA	48585174	48663129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650300_48650419_48658773_48658933_48662000
Isoform_130906_5	chr4	+	2813	4	FSM	ENSMUSG00000039634.13	ENSMUST00000042964.13	2835	4	53	-31	12	31	multi-exon	FALSE	canonical	1	1	junction_1	22.553639765383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAGCTGAGATGTTTTG	-27	True	NA	NA	False	AATAAA	-23	NA	49521228	49531548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_49521252_49521422_49521596_49522397_49522483_49529016
Isoform_130907_3	chr4	+	2979	4	FSM	ENSMUSG00000039634.13	ENSMUST00000042964.13	2835	4	42	-186	1	186	multi-exon	FALSE	canonical	1	1	junction_1	22.553639765383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCATTATTTGCT	-38	True	NA	NA	False	ATTAAA	-16	NA	49521217	49531703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_49521252_49521422_49521596_49522397_49522483_49529016
Isoform_130908_11	chr4	+	3104	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	47	-186	47	186	multi-exon	FALSE	canonical	3	41	junction_2	6.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCATTATTTGCT	8	True	NA	NA	False	ATTAAA	-16	NA	49521263	49531703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_49521596_49522397_49522483_49529016
Isoform_13091_12	chr11	-	6187	28	FSM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	26	0	26	0	multi-exon	FALSE	canonical	3	150	junction_10	34.9266525198369	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCTTTTCTTTATCA	NA	False	NA	0	True	ATTAAA	-21	NA	58059339	58010827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_130910_46	chr4	+	2938	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	48	-21	48	21	multi-exon	FALSE	canonical	3	41	junction_2	6.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTATGCTAGAAAGCTG	9	True	NA	NA	False	AATAAA	-13	NA	49521264	49531538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_49521596_49522397_49522483_49529016
Isoform_130911_4	chr4	+	5216	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	24	-2275	24	2275	multi-exon	FALSE	canonical	3	41	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGACAGTTTGTTTTCTG	-15	True	NA	NA	False	ATTAAA	-13	NA	49521240	49533792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_49521596_49522397_49522483_49529016
Isoform_130915_62	chr4	+	4136	21	FSM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	16	2	-11	-1	multi-exon	FALSE	canonical	3	46	junction_1	16.7996279720713	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTGTGGTGTT	3	True	NA	3	True	ATTAAA	-15	NA	49632081	49656885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
Isoform_130917_33	chr4	+	4197	21	FSM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	-44	1	16	0	multi-exon	FALSE	canonical	3	46	junction_1	16.7996279720713	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	17	False	NA	4	True	ATTAAA	-16	NA	49632021	49656886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
Isoform_130918_16	chr4	+	4344	20	FSM	ENSMUSG00000028309.15	ENSMUST00000167496.8	4312	20	-32	0	22	0	multi-exon	FALSE	canonical	3	48	junction_4	16.450883834839	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	23	False	NA	4	True	ATTAAA	-16	NA	49632027	49656886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
Isoform_13093_12	chr11	-	5183	28	FSM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	26	1004	26	284	multi-exon	FALSE	canonical	3	150	junction_10	34.9266525198369	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTGGGGTCATAGAAT	NA	False	NA	-1	True	AATAAA	-24	NA	58059339	58011831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_130930_154	chr4	+	5308	25	FSM	ENSMUSG00000028312.20	ENSMUST00000117280.8	5328	25	17	3	-6	-3	multi-exon	FALSE	canonical	3	100	junction_1	79.8595990195014	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	-2	True	NA	18	True	ATTAAA	-18	NA	52439259	52488257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
Isoform_130942_569	chr4	+	5385	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	17	2	-6	-2	multi-exon	FALSE	canonical	3	347	junction_1	46.9361083164006	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTGTAGTACTACAGT	-2	True	NA	19	True	ATTAAA	-19	NA	52439259	52488258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
Isoform_13097_4	chr11	-	2897	4	NIC	ENSMUSG00000049755.15	novel	2862	4	NA	NA	7	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	10.6770782520313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTATTTTGGCTCGTGG	622	False	NA	NA	False	NA	NA	NA	58214165	58205961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_58208361_58210149_58210417_58213394_58213556_58214095
Isoform_130971_24	chr4	+	2161	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	45	-654	-25	654	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTTTTTTTAAACAT	-23	True	NA	NA	False	ATTAAA	-18	NA	53011924	53022714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
Isoform_130972_472	chr4	+	1499	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	53	0	-17	0	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	-15	True	NA	10	True	AATAAA	-21	NA	53011932	53022060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
Isoform_130975_10	chr4	+	1359	5	FSM	ENSMUSG00000015247.11	ENSMUST00000107665.4	848	5	-33	-478	-33	-6	multi-exon	FALSE	canonical	3	19	junction_3	242.862615484557	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGATTTTTTATCAAGTG	-31	True	NA	4	True	AATAAA	-15	NA	53011916	53022054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53021110_53021198_53021283
Isoform_130976_9	chr4	+	2056	7	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	-12	-9	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_3	267.705061588308	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTGATTTTTTATCAA	-10	True	NA	1	True	AATAAA	-12	NA	53011937	53022051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_53012048_53015014_53015226_53017048_53017208_53018114_53018686_53020181_53020332_53021110_53021198_53021283
Isoform_130978_775	chr4	+	4624	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-261	19	-3	-19	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGTGTTTAGAAATTAT	-36	True	NA	14	True	AATAAA	-14	NA	53440409	53567799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
Isoform_13098_9	chr11	-	527	4	FSM	ENSMUSG00000049154.13	ENSMUST00000239007.2	561	4	35	-1	35	1	multi-exon	FALSE	canonical	3	25	junction_1	3.29983164553722	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGACTATGTCACAGAT	NA	False	NA	NA	False	AATAAA	-22	NA	58692751	58683627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58683826_58687380_58687485_58689461_58689522_58692586
Isoform_130983_9	chr4	+	4738	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-376	20	-118	-20	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTTTAGAAATTA	NA	False	NA	13	True	AATAAA	-13	NA	53440294	53567798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
Isoform_13099_79	chr11	-	3031	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	17	842	17	-842	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTCTGTCAGAGCACA	7201	False	NA	-2	True	AATAAA	-14	NA	58795034	58779820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
Isoform_13100_28	chr11	-	3894	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	17	-21	17	21	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCAAGTCTTGGTATTT	7201	False	NA	NA	False	AATAAA	-40	NA	58795034	58778957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
Isoform_131005_42	chr4	+	5928	10	FSM	ENSMUSG00000028414.18	ENSMUST00000128667.8	6080	10	152	0	-13	0	multi-exon	FALSE	canonical	3	30	junction_1	6.81501610008696	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTGTTTGTTTTTGA	-21	True	NA	5	True	AATAAA	-18	NA	53714149	53765785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
Isoform_131006_6	chr4	+	6233	10	FSM	ENSMUSG00000028414.18	ENSMUST00000221657.2	6241	10	8	0	8	0	multi-exon	FALSE	canonical	1	1	junction_1	14.3819159423506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTGTTTGTTTTTGA	25	True	NA	5	True	AATAAA	-18	NA	53714195	53765785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53714547_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
Isoform_131008_3	chr4	+	6038	11	ISM	ENSMUSG00000028414.18	ENSMUST00000222290.2	3123	12	12	12108	12	-3	5prime_fragment	FALSE	canonical	2	9	junction_2	14.4377976159801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTTTTGTGTTTGTTTT	4	True	NA	2	True	AATAAA	-15	NA	53714174	53765782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_53714196_53720006_53720210_53724604_53724743_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
Isoform_131013_31	chr4	+	2820	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	46	-4	34	4	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGTATTCTTCTTCTTTT	30	True	NA	NA	False	ATTAAA	-35	NA	53826090	53862023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_131014_16	chr4	+	2883	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	-21	0	-21	0	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	-37	True	NA	NA	False	ATTAAA	-31	NA	53826023	53862019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_131015_29	chr4	+	1452	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	-17	1427	-17	-1427	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTATACAGTTATTT	-33	True	NA	5	True	AATAAA	-14	NA	53826027	53860592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_131016_61	chr4	+	1430	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	5	1427	5	-1427	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTATACAGTTATTT	-11	True	NA	5	True	AATAAA	-14	NA	53826049	53860592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_131019_6	chr4	+	2749	5	NIC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	-40	4	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	42.4345083628879	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGTATTCTTCTTCTTTT	NA	False	NA	NA	False	ATTAAA	-35	NA	53826004	53862023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_53826221_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_131022_3	chr4	+	3133	3	ISM	ENSMUSG00000060206.12	ENSMUST00000079605.5	4684	11	61515	-2233	61515	0	3prime_fragment	FALSE	canonical	3	26	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCATCTGTTAAGT	NA	False	NA	10	True	AATAAA	-19	NA	55072994	55083563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_55073106_55079263_55079388_55080665
Isoform_131029_1289	chr4	+	2303	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	26	1481	17	-1481	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACCATTGCATGTTTG	8	True	NA	16	True	AGTAAA	-8	NA	55350068	55390756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
Isoform_131031_246	chr4	+	3073	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	26	711	17	-711	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTACCATGTTTAACTT	8	True	NA	14	True	AATAAA	-22	NA	55350068	55391526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
Isoform_131032_1114	chr4	+	2767	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	18	1025	9	-1025	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCTTTTATTTGGAT	0	True	NA	37	True	ATTAAA	-19	NA	55350060	55391212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
Isoform_13105_3984	chr11	-	1926	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	23	0	23	0	multi-exon	TRUE	canonical	3	1063	junction_2	80.5495016882303	3984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	58829719	58823113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
Isoform_13106_607	chr11	-	1960	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	1063	junction_2	80.5495016882303	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	58829753	58823113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
Isoform_131061_5	chr4	+	4132	6	FSM	ENSMUSG00000038827.12	ENSMUST00000131520.8	4360	6	224	4	-42	-4	multi-exon	FALSE	canonical	3	7	junction_1	52.8189359983709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGGCTTTCTGTGTA	-16	True	NA	9	True	AATAAA	-18	NA	56802575	56809597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_56802727_56803507_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
Isoform_131062_4	chr4	+	4358	6	FSM	ENSMUSG00000038827.12	ENSMUST00000131520.8	4360	6	-1	3	-1	-3	multi-exon	FALSE	canonical	3	7	junction_1	52.8189359983709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGCTTTCTGTGTAC	2	True	NA	10	True	AATAAA	-19	NA	56802350	56809598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_56802727_56803507_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
Isoform_131064_70	chr4	+	4269	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	2	4	-1	-4	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGGCTTTCTGTGTA	2	True	NA	9	True	AATAAA	-18	NA	56802350	56809597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
Isoform_131065_4	chr4	+	2311	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	-27	1991	-23	1663	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCACGTCCACGGCAGC	0	True	NA	NA	False	NA	NA	NA	56802321	56807610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
Isoform_131093_8	chr4	+	4541	3	FSM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	-11	2120	-11	-2120	multi-exon	FALSE	canonical	3	18	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTTATGTTATTA	7	True	NA	21	True	ATTAAA	-21	NA	57845235	57894862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_57845307_57854561_57857038_57892868
Isoform_131096_8	chr4	+	3326	3	FSM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	-18	3342	-18	-3342	multi-exon	FALSE	canonical	3	18	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTCTTCATGTTGCAG	0	True	NA	6	True	TATAAA	-18	NA	57845228	57893640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_57845307_57854561_57857038_57892868
Isoform_131101_11	chr4	+	1683	5	FSM	ENSMUSG00000070972.14	ENSMUST00000153467.3	2393	5	-38	748	-17	309	multi-exon	FALSE	canonical	2	4	junction_1	45.2189119727576	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAAGTGTTTCTTCTT	-14	True	NA	13	True	TTTAAA	-6	NA	59003154	59022992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59003558_59013631_59013856_59017669_59017823_59020058_59020530_59022560
Isoform_131105_40	chr4	+	1467	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	-26	2582	-26	308	multi-exon	FALSE	canonical	3	77	junction_1	16.2685791225499	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGAAGTGTTTCTTCT	-23	True	NA	12	True	TTTAAA	-5	NA	59003145	59022991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
Isoform_131108_285	chr4	+	1059	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	128	5	128	-5	multi-exon	FALSE	canonical	3	257	junction_2	16.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTAGTTTGTGTTTGG	4	True	NA	30	True	AATAAA	-30	NA	59035215	59041898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59035319_59039226_59039359_59041074
Isoform_131111_7	chr4	+	1171	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	0	21	0	-21	multi-exon	FALSE	canonical	3	257	junction_2	16.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATTTTCCATGACAGC	1876	False	NA	14	True	AATAAA	-14	NA	59035087	59041882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59035319_59039226_59039359_59041074
Isoform_131112_423	chr4	+	3781	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	230	1	-71	-1	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAGAGTAATGGACTGGCT	-11	True	NA	NA	False	AATAAA	-18	NA	59189486	59222832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
Isoform_131115_12	chr4	+	4129	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	-121	4	-121	-4	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACGAGAGTAATGGACTG	NA	False	NA	NA	False	AATAAA	-15	NA	59189135	59222829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
Isoform_131116_29	chr4	+	4065	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	-59	6	-59	-6	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAACGAGAGTAATGGAC	NA	False	NA	NA	False	AATAAA	-13	NA	59189197	59222827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
Isoform_131127_104	chr4	+	2565	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	43	3	-39	-2	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTATGTGCCTTTTAT	11	False	NA	17	True	NA	NA	NA	59581605	59618686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
Isoform_13113_86	chr11	-	2539	3	NIC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	20	0	intron_retention	FALSE	canonical	3	1063	junction_1	6.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	58829722	58823113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_58825058_58827965_58828059_58829220
Isoform_131132_7	chr4	+	3229	3	FSM	ENSMUSG00000045071.15	ENSMUST00000052420.7	3205	3	-21	-3	11	3	multi-exon	FALSE	canonical	2	5	junction_2	48.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTTACTGTGGTGC	0	True	NA	NA	False	AATAAA	-14	NA	59626221	59721404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59626492_59690143_59691339_59719640
Isoform_131133_5	chr4	+	5168	3	FSM	ENSMUSG00000045071.15	ENSMUST00000052420.7	3205	3	-47	-1916	-15	1916	multi-exon	FALSE	canonical	2	5	junction_2	48.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATCTTAAATGTTCCCT	-26	True	NA	NA	False	ATTAAA	-18	NA	59626195	59723317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59626492_59690143_59691339_59719640
Isoform_131137_86	chr4	+	3714	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	5	7137	5	1263	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTCTTTAAATTAGTT	-6	True	NA	16	True	ATTAAA	-23	NA	59626215	59754302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
Isoform_13114_59	chr11	-	1989	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	-26	2058	-26	-2058	multi-exon	FALSE	canonical	3	10	junction_1	4.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCAGACCTCTTGTTTC	NA	False	NA	-1	True	AGTAAA	-19	NA	59054591	59048252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59049486_59049663_59050005_59054176
Isoform_131144_32	chr4	+	2308	8	ISM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	8	9228	8	955	5prime_fragment	FALSE	canonical	3	98	junction_2	9.81876587282262	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACCTCAGAGTTAGCAT	-24	True	NA	NA	False	TTTAAA	-10	NA	59805847	59895509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524
Isoform_131145_11	chr4	+	3523	8	ISM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	10	8011	10	2172	5prime_fragment	FALSE	canonical	3	98	junction_2	9.81876587282262	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGGCAGTATGAGCC	-22	True	NA	NA	False	NA	NA	NA	59805849	59896726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524
Isoform_13115_7	chr11	-	4054	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	-32	-1	-32	1	multi-exon	FALSE	canonical	3	10	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTTGTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	59054597	59046193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59049486_59049663_59050005_59054176
Isoform_131150_66	chr4	+	7302	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	14	-2	14	2	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTGCTCATTTTTGTC	-18	True	NA	20	True	AATAAA	-29	NA	59805853	59904739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
Isoform_131154_5	chr4	+	872	7	FSM	ENSMUSG00000078689.9	ENSMUST00000107521.8	642	7	-79	-151	-79	-3	multi-exon	FALSE	canonical	3	12	junction_2	4.92442890089805	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTCTCTGTGTCC	-15	True	NA	NA	False	AATAAA	-18	NA	59964214	60007271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_59964368_60003977_60004112_60004813_60004888_60005471_60005583_60005921_60006024_60006188_60006235_60007019
Isoform_131155_163	chr4	+	1792	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	28	0	28	0	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204713	62216648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
Isoform_131157_889	chr4	+	3726	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	-10	2	-10	-2	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	889	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTCTGTCTACACA	NA	False	NA	21	True	AATAAA	-21	NA	62278953	62310004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
Isoform_13117_588	chr11	-	940	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	143	-5	3	5	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACAGCCCTCCATACT	1613	False	NA	-15	True	AATAAA	-18	NA	59082635	59074695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
Isoform_131173_70	chr4	+	2830	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	13	2380	13	1279	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTATTTTCTATTTCA	NA	False	NA	17	True	AGTAAA	-24	NA	62327046	62342847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
Isoform_131176_16	chr4	+	5213	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	10	0	10	0	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACAGCTTAGTCTAT	NA	False	NA	NA	False	AATAAA	-18	NA	62327043	62345227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
Isoform_13118_11	chr11	-	1015	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	61	2	61	-2	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATAGTGTCACAGCCCT	1531	False	NA	-22	True	AATAAA	-11	NA	59082717	59074702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
Isoform_131187_93	chr4	+	2156	6	FSM	ENSMUSG00000028392.16	ENSMUST00000107449.4	2167	6	9	2	9	-2	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTCTTTGCTGGTAAC	9565	False	NA	26	True	AATAAA	-37	NA	62398298	62415533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234
Isoform_131188_7	chr4	+	1762	7	FSM	ENSMUSG00000028392.16	ENSMUST00000030088.12	1757	7	-11	6	-11	-6	multi-exon	FALSE	canonical	3	6	junction_6	6.83130051063973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAATGTCTTTGCTGG	9545	False	NA	22	True	AATAAA	-33	NA	62398278	62415529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234_62414809_62415218
Isoform_131189_4	chr4	+	1822	10	ISM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-92	31290	-92	-382	intron_retention	FALSE	canonical	3	65	junction_5	11.4352714046832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	62501745	62544386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333
Isoform_13119_9	chr11	-	991	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	-85	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	290.128261572818	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACAGCCCTCCATACT	1385	False	NA	-15	True	AATAAA	-18	NA	59082863	59074695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082753
Isoform_131190_20	chr4	+	2450	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-91	-287	-91	287	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACACTGCAAGGGTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	62501746	62575963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
Isoform_131191_6	chr4	+	2506	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-144	-290	-144	290	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGCAAGGGTCTGTAC	NA	False	NA	NA	False	AATAAA	-19	NA	62501693	62575966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
Isoform_131193_4	chr4	+	4632	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-152	-2408	-152	7	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGTCATCAAGACCCT	NA	False	NA	NA	False	NA	NA	NA	62501685	62578084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
Isoform_131195_6	chr4	+	4560	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-92	-2396	-92	-5	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCCTCCGACTCCTGT	NA	False	NA	NA	False	NA	NA	NA	62501745	62578072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
Isoform_131196_80	chr4	+	4305	23	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-92	-2	combination_of_known_junctions	FALSE	canonical	2	39	junction_18	14.1957973061405	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTCTGTGTATTCCTG	NA	False	NA	-1	True	AATAAA	-19	NA	62501745	62621253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
Isoform_131197_26	chr4	+	4342	23	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-132	-5	combination_of_known_junctions	TRUE	canonical	2	39	junction_18	14.1957973061405	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGTCTCTGTGTATTC	NA	False	NA	-4	True	AATAAA	-16	NA	62501705	62621250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
Isoform_131198_3	chr4	+	1907	18	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-92	14350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.5594757112746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	62501745	62592427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62592347
Isoform_131199_7	chr4	+	621	5	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-137	-16505	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	32.2286751201473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCCTCTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	62501700	62525648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525482
Isoform_131202_17	chr4	+	2646	7	NIC	ENSMUSG00000059810.19	novel	496	2	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	17.9071680247511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTGTATTCCTGGTC	NA	False	NA	2	True	AATAAA	-22	NA	62581864	62621256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_62582030_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
Isoform_131204_1968	chr4	+	1006	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	80	49	80	-49	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	1968	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTGGCTCCTTTTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	63463088	63468938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_63463237_63466821_63466923_63468181
Isoform_13121_8	chr11	-	1109	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	49	3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	289.443026010513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTCACAGCCCTCCATA	1659	False	NA	-17	True	AATAAA	-16	NA	59082589	59074697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082359
Isoform_131217_11	chr4	+	3792	10	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	22.7888861801829	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAGTAAGGGACCATGT	NA	False	NA	17	True	AATAAA	-17	NA	63477019	63504593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_63477195_63479118_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_13122_8	chr11	-	1189	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	287.687543089685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATAGTGTCACAGCCCTC	1616	False	NA	-21	True	AATAAA	-12	NA	59082632	59074701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_59075014_59075261_59075606_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
Isoform_131223_27	chr4	+	2251	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	-26	1540	-26	-1536	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCATATGTATTCATTC	NA	False	NA	NA	False	NA	NA	NA	63476991	63503054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_131224_82	chr4	+	3720	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	44	1	-31	-1	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAGTAAGGGACCATGT	NA	False	NA	17	True	AATAAA	-17	NA	63477061	63504593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_131225_30	chr4	+	2464	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	1	1300	1	-1296	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCCCATGGATTGGTTG	NA	False	NA	NA	False	AAAAAG	-13	NA	63477018	63503294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_131228_25	chr4	+	3141	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	-11	635	-11	-631	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCGTGGAGGCGTGG	NA	False	NA	13	True	AATAAA	-24	NA	63477006	63503959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_131231_3	chr4	+	3812	11	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.3429719012918	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAGTAAGGGACCATGT	NA	False	NA	17	True	AATAAA	-17	NA	63477017	63504593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_63477195_63478179_63478228_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_131232_294	chr4	+	3160	2	FSM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	34	0	34	0	multi-exon	FALSE	canonical	3	75	junction_1	0	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523256	65534475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_65523307_65531365
Isoform_131233_131	chr4	+	3166	2	FSM	ENSMUSG00000051675.14	ENSMUST00000107366.2	3191	2	25	0	25	0	multi-exon	FALSE	canonical	3	41	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523247	65534475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_65523307_65531368
Isoform_131237_141	chr4	+	4275	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	-78	-1	-78	1	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170094	74324098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
Isoform_131238_312	chr4	+	4167	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	30	-1	30	1	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170202	74324098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
Isoform_131239_16	chr4	+	4074	21	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	72.8474433319386	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170180	74324098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_74170324_74181045_74181207_74189430_74189607_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
Isoform_131253_8	chr4	+	3027	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	34	5	34	-5	multi-exon	FALSE	canonical	3	28	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTGTCTGGTGTTAT	NA	False	NA	NA	False	AATACA	-19	NA	80828916	80873860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_80829883_80871799
Isoform_131254_38	chr4	+	1709	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	34	1323	34	-1323	multi-exon	FALSE	canonical	3	28	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCGTGGTTTGTGGTGTT	NA	False	NA	21	True	AATAAA	-23	NA	80828916	80872542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_80829883_80871799
Isoform_131255_67	chr4	+	936	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	4	2	4	-2	multi-exon	FALSE	canonical	3	396	junction_3	22.8875512014719	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTTTCTAGTCCCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	83335971	83360321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
Isoform_131256_30	chr4	+	2078	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	21	-694	1	1	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTGTTTAAAAGATTT	NA	False	NA	NA	False	AATAAA	-14	NA	83335981	83372271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
Isoform_131257_264	chr4	+	1386	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	11	8	4	-8	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAACTTCTGATTCTT	NA	False	NA	10	True	TATAAA	-10	NA	83335971	83371569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
Isoform_131260_310	chr4	+	2833	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	-13	2	-13	-2	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGGCTTCTGCTTCTT	NA	False	NA	26	True	AATAAA	-16	NA	85123664	85307615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
Isoform_131265_60	chr4	+	3115	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	-295	2	20	-2	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGGCTTCTGCTTCTT	NA	False	NA	26	True	AATAAA	-16	NA	85123382	85307615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
Isoform_131268_12	chr4	+	4557	8	NIC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	246	junction_4	16.9957977999605	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGGCTTCTGCTTCTT	NA	False	NA	26	True	AATAAA	-16	NA	85123664	85307615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85297648_85299641_85299746_85304026_85304158_85305790
Isoform_131275_9	chr4	+	7799	32	NIC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_19	10.1503781653229	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGTGTCTGTTGAATT	8163	False	NA	NA	False	AATAAA	-14	NA	86666783	86768838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
Isoform_131278_4	chr4	+	4230	6	FSM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	-16	2	-16	-2	multi-exon	FALSE	canonical	2	4	junction_1	3.00665927567458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGAAATTATTTCTT	NA	False	NA	24	True	AATAAA	-15	NA	86792616	86839110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_86792834_86804394_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
Isoform_131279_14	chr4	+	4135	5	ISM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	11642	0	11624	0	3prime_fragment	FALSE	canonical	2	7	junction_3	2.29128784747792	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAAATTATTTCTTTC	7708	False	NA	26	True	AATAAA	-17	NA	86804274	86839112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
Isoform_131280_4	chr4	+	4099	5	NNC	ENSMUSG00000038007.15	novel	4216	6	NA	NA	11620	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.82182538049648	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTCTTTCTTTAAA	7704	False	NA	32	True	AATAAA	-23	NA	86804270	86839118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_86804510_86805260_86805403_86818718_86818857_86829852_86829945_86835630
Isoform_131282_159	chr4	+	712	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	29	2202	29	129	multi-exon	FALSE	canonical	3	467	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTGTGGTTCAAGA	4149	False	NA	22	True	NA	NA	NA	86848956	86850857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_86849080_86850268
Isoform_131286_3	chr4	+	724	4	ISM	ENSMUSG00000038368.17	ENSMUST00000161058.8	1430	9	-28	53646	-12	7586	5prime_fragment	FALSE	canonical	3	135	junction_1	10.2306728354819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88012853	88047635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134
Isoform_131287_12	chr4	+	1753	11	ISM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	-16	213786	-15	14176	5prime_fragment	FALSE	canonical	3	105	junction_5	16.9292646030476	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGAATTCAGTATATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	88012850	88115457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995
Isoform_131288_3	chr4	+	1901	11	ISM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	-3	213625	-2	14337	5prime_fragment	FALSE	canonical	3	105	junction_5	16.9292646030476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGTGGTCCTGATCT	NA	False	NA	NA	False	AATAAA	-18	NA	88012863	88115618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995
Isoform_131290_180	chr4	+	5798	44	FSM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	-13	6	-12	-4	multi-exon	FALSE	canonical	0	0	junction_35	26.0666035463672	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTGCAATGTGACTTT	NA	False	NA	4	True	AGTAAA	-13	NA	88012853	88329237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
Isoform_131292_18	chr4	+	5548	43	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_34	31.831445611301	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88012856	88329248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
Isoform_131293_4	chr4	+	5878	45	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	37.6621220045326	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCAATGTGACTTTTAT	NA	False	NA	7	True	AGTAAA	-16	NA	88012848	88329240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88101982_88102055_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
Isoform_131299_3	chr4	+	1954	12	ISM	ENSMUSG00000038368.17	ENSMUST00000107148.8	5988	17	15041	4	15041	1	3prime_fragment	FALSE	canonical	0	0	junction_3	45.6783580779149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAATGTGACTTTTATTT	NA	False	NA	9	True	AGTAAA	-18	NA	88278644	88329242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
Isoform_131300_578	chr4	+	2535	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	262	0	262	0	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAGATTATACTTGA	5310	False	NA	NA	False	NA	NA	NA	89055620	89099318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
Isoform_131309_3	chr4	+	1684	6	ISM	ENSMUSG00000028576.13	ENSMUST00000107104.3	1713	14	17	36326	17	-36326	5prime_fragment	FALSE	canonical	3	184	junction_4	9.62081077664455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCAGTTCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	94502744	94516609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488
Isoform_131314_179	chr4	+	2114	20	FSM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	27	-2	27	2	multi-exon	FALSE	canonical	3	154	junction_8	18.5526129152575	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94502754	94581468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
Isoform_131315_14	chr4	+	2181	20	FSM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	-39	-3	-39	3	multi-exon	FALSE	canonical	3	154	junction_8	18.5526129152575	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTTTTCCTGTGTTTGT	NA	False	NA	13	True	AATAAA	-14	NA	94502688	94581469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
Isoform_131316_8	chr4	+	2172	9	NNC	ENSMUSG00000028576.13	novel	1713	14	NA	NA	33	-24841	intron_retention	FALSE	canonical	3	12	junction_8	62.4234531246069	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAACAGATTATT	NA	False	NA	NA	False	NA	NA	NA	94502760	94528094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94526652
Isoform_131317_4	chr4	+	4661	23	FSM	ENSMUSG00000006386.16	ENSMUST00000102798.8	4654	23	-9	2	2	-2	multi-exon	FALSE	canonical	1	2	junction_15	3.20027116619671	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTCCCAGGATTGTGT	272	False	NA	NA	False	AATAAA	-16	NA	94627527	94763174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94699524_94699654_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
Isoform_131318_27	chr4	+	1884	16	FSM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	4	3	0	1	multi-exon	FALSE	canonical	3	19	junction_11	4.66476151587624	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGGAGTCACTTATGTC	NA	False	NA	7	True	AATAAA	-20	NA	95445747	95815173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
Isoform_131319_3	chr4	+	1767	15	NIC	ENSMUSG00000028573.19	novel	1891	16	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	8.68995432223029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGTCACTTATGTCT	NA	False	NA	8	True	AATAAA	-21	NA	95445744	95815174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95737818_95737914_95811161_95811224_95814959
Isoform_13132_85	chr11	-	2009	5	FSM	ENSMUSG00000048076.15	ENSMUST00000163300.8	1991	5	-19	1	-19	-1	multi-exon	FALSE	canonical	3	71	junction_4	968.523876835259	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGCTTGTGTGTCAGTG	1936	False	NA	-3	True	AATAAA	-16	NA	59119007	59102238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118701
Isoform_131320_4	chr4	+	1672	14	NIC	ENSMUSG00000028573.19	novel	1891	16	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	8.27057234197884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGGAGTCACTTATGT	NA	False	NA	6	True	AATAAA	-19	NA	95445748	95815172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
Isoform_131321_3	chr4	+	1771	15	NIC	ENSMUSG00000028573.19	novel	1891	16	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	8.90768986749708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGTCACTTATGTCT	NA	False	NA	8	True	AATAAA	-21	NA	95445753	95815174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
Isoform_131322_6	chr4	+	1961	17	NNC	ENSMUSG00000028573.19	novel	1891	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	9.54082510844843	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAACTGGAGTCACTTA	NA	False	NA	3	True	AATAAA	-16	NA	95445744	95815169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_95445829_95454054_95454133_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
Isoform_131325_158	chr4	+	5438	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	77	2	-46	-2	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGGTTTTAGTG	4791	False	NA	30	True	AATAAA	-43	NA	95855553	95913648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
Isoform_131327_64	chr4	+	5473	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	42	2	42	-2	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGGTTTTAGTG	4756	False	NA	30	True	AATAAA	-43	NA	95855518	95913648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
Isoform_131329_21	chr4	+	5543	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	-28	2	-28	-2	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGGTTTTAGTG	4686	False	NA	30	True	AATAAA	-43	NA	95855448	95913648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
Isoform_131331_3	chr4	+	2138	15	FSM	ENSMUSG00000061859.18	ENSMUST00000107030.9	2104	15	-37	3	0	-3	multi-exon	FALSE	canonical	2	3	junction_14	5.57554792768187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	98284091	98342941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98342596
Isoform_131333_18	chr4	+	3305	20	ISM	ENSMUSG00000061859.18	ENSMUST00000238306.2	7416	45	64	221971	0	-1	5prime_fragment	FALSE	canonical	2	11	junction_1	4.26088308379139	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTCTTTTAAATTCCC	NA	False	NA	NA	False	AATAAA	-19	NA	98284091	98385869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
Isoform_131334_3	chr4	+	6105	44	FSM	ENSMUSG00000061859.18	ENSMUST00000041284.10	7340	44	-8	1243	-2	2	multi-exon	FALSE	canonical	1	2	junction_32	5.98203548240142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCTCGCAATGAACTAT	NA	False	NA	NA	False	AATAAA	-26	NA	98284019	98606597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
Isoform_131339_358	chr4	+	3088	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	188.179933839929	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTTACTTAATGTCC	NA	False	NA	30	True	NA	NA	NA	98615030	98626715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682_98625038_98625061
Isoform_13134_3056	chr11	-	1746	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	54	0	54	0	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	3056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1901	False	NA	-4	True	AATAAA	-15	NA	59119042	59102239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
Isoform_131343_23	chr4	+	3155	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	-6	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	188.179933839929	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTTACTTAATGTCCC	NA	False	NA	31	True	NA	NA	NA	98614964	98626716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682_98625038_98625061
Isoform_131350_634	chr4	+	3068	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	184.711937892492	634	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTTACTTAATGTCC	NA	False	NA	30	True	NA	NA	NA	98615030	98626715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682_98625038_98625061
Isoform_131351_57	chr4	+	3121	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	184.711937892492	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTTACTTAATGTCCC	NA	False	NA	31	True	NA	NA	NA	98614978	98626716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682_98625038_98625061
Isoform_13136_86	chr11	-	1808	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	-7	-1	-7	-1	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGCTTGTGTGTCAGTG	1840	False	NA	-3	True	AATAAA	-16	NA	59119103	59102238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
Isoform_131372_10	chr4	+	2235	4	NNC	ENSMUSG00000085843.2	novel	2251	3	NA	NA	-10	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.684198393627	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGCCTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	98681994	98687142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_98682120_98684245_98684324_98685079_98686716_98686746
Isoform_131373_9	chr4	+	2202	4	NNC	ENSMUSG00000085843.2	novel	2251	3	NA	NA	25	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.684198393627	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGCCTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	98682029	98687142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_98682120_98684245_98684324_98685079_98686718_98686746
Isoform_131378_259	chr4	+	3480	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	45	2	-40	-2	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGATTTTTTTTTTT	NA	False	NA	16	True	AATAAA	-22	NA	98812160	98823778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_131379_113	chr4	+	3730	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	-207	4	-138	-4	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGATTTTTTTTT	NA	False	NA	14	True	AATAAA	-20	NA	98811908	98823776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_131388_183	chr4	+	3466	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	107	4	38	-4	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGATTTTTTTTT	NA	False	NA	14	True	AATAAA	-20	NA	98812153	98823776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_131389_50	chr4	+	3585	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-12	4	-12	-4	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGATTTTTTTTT	NA	False	NA	14	True	AATAAA	-20	NA	98812034	98823776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_131390_28	chr4	+	3672	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-98	3	-98	-3	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGATTTTTTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	98811948	98823777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_131399_296	chr4	+	3245	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	38	-5	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTGTGATTTTTTTT	NA	False	NA	13	True	AATAAA	-19	NA	98812153	98823775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_131400_36	chr4	+	3522	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-168	-3	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGATTTTTTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	98811878	98823777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_131401_90	chr4	+	3394	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-42	-5	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTGTGATTTTTTTT	NA	False	NA	13	True	AATAAA	-19	NA	98812004	98823775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_131419_16	chr4	+	2769	11	FSM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	19	4	19	-4	multi-exon	FALSE	canonical	3	50	junction_1	10.6155546251715	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGACACTTTTGTT	NA	False	NA	5	True	NA	NA	NA	99082402	99148016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99082521_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
Isoform_131420_16	chr4	+	2808	11	FSM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	-16	0	-16	0	multi-exon	FALSE	canonical	3	50	junction_1	10.6155546251715	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACACTTTTGTTTTGG	NA	False	NA	9	True	NA	NA	NA	99082367	99148020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99082521_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
Isoform_131421_4	chr4	+	3018	11	FSM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	-226	0	-13	0	multi-exon	FALSE	canonical	3	50	junction_1	10.6155546251715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACACTTTTGTTTTGG	NA	False	NA	9	True	NA	NA	NA	99082157	99148020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99082521_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
Isoform_131422_45	chr4	+	2929	11	FSM	ENSMUSG00000028550.16	ENSMUST00000030279.15	3178	11	241	8	28	-4	multi-exon	FALSE	canonical	3	33	junction_1	14.1265707091282	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGACACTTTTGTT	NA	False	NA	5	True	NA	NA	NA	99082411	99148016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99082690_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
Isoform_131423_5	chr4	+	3171	11	FSM	ENSMUSG00000028550.16	ENSMUST00000030279.15	3178	11	-11	18	-11	-14	multi-exon	FALSE	canonical	3	33	junction_1	14.1265707091282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACATGAAAACATAAGA	NA	False	NA	-5	True	NA	NA	NA	99082159	99148006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99082690_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
Isoform_131424_26	chr4	+	1975	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	8	-1629	8	1629	multi-exon	FALSE	canonical	3	84	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTGCGAATGGATTA	NA	False	NA	3	True	AATAAA	-14	NA	99457744	99462877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99457876_99461033
Isoform_131425_43	chr4	+	1067	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-2	-711	-2	711	multi-exon	FALSE	canonical	3	84	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACGATAGCTGGTCTCTT	NA	False	NA	1	True	AATAAA	-22	NA	99457734	99461959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99457876_99461033
Isoform_131429_10	chr4	+	3049	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-8	-2687	-8	2687	multi-exon	TRUE	canonical	3	84	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGCATTGTCTCTTTT	NA	False	NA	9	True	ATTAAA	-20	NA	99457728	99463935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99457876_99461033
Isoform_131431_151	chr4	+	3071	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	5	3	5	-3	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603906	99651694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_131432_89	chr4	+	3108	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	-32	3	-31	-3	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603869	99651694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_131433_9	chr4	+	2884	14	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	5	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	57.0281774016273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603906	99651693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_131434_4	chr4	+	2951	14	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-61	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	57.0281774016273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603839	99651693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_131435_7	chr4	+	2819	13	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	56.4121736270934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	16	True	ATTAAA	-16	NA	99603908	99651695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_131437_3	chr4	+	2749	12	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	61.0470621869136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603894	99651694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_131438_12	chr4	+	2556	10	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	60.5042596194579	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	16	True	ATTAAA	-16	NA	99603909	99651695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_131439_3	chr4	+	2586	10	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-23	-4	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	60.5042596194579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603877	99651693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_131443_11	chr4	+	2161	14	NIC	ENSMUSG00000073791.14	novel	2121	14	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	4.74933816628712	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGACTGTCTTGT	2032	False	NA	NA	False	AATACA	-13	NA	99717693	99769979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_99717792_99719626_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
Isoform_131444_8	chr4	+	2168	14	FSM	ENSMUSG00000073791.14	ENSMUST00000136874.4	2121	14	-53	6	2	1	multi-exon	FALSE	canonical	3	6	junction_1	5.10481846862679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGACTGTCTTGT	2022	False	NA	NA	False	AATACA	-13	NA	99717683	99769979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99717792_99719629_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
Isoform_131446_448	chr4	+	2302	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	64	5	64	-5	multi-exon	FALSE	canonical	3	174	junction_5	14.102836594104	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTTGCCTGTTGTCGCTTT	NA	False	NA	11	True	ATTAAA	-14	NA	99786674	99844486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
Isoform_131447_123	chr4	+	2329	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	37	5	37	-5	multi-exon	TRUE	canonical	3	174	junction_5	14.102836594104	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTTGCCTGTTGTCGCTTT	NA	False	NA	11	True	ATTAAA	-14	NA	99786647	99844486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
Isoform_131457_284	chr4	+	5766	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-1	0	-1	0	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	NA	False	NA	18	True	AATAAA	-20	NA	100633870	100861741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
Isoform_131472_12	chr4	+	4260	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	2	-217	2	217	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTGGTCATGAGTAAC	NA	False	NA	NA	False	ATTAAA	-21	NA	100926181	101009784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
Isoform_131473_70	chr4	+	4043	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	1	1	1	-1	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTAGTATGTTTATTG	NA	False	NA	7	True	ATTAAA	-17	NA	100926180	101009566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
Isoform_131476_28	chr4	+	4172	6	FSM	ENSMUSG00000028527.19	ENSMUST00000102780.8	4186	6	13	1	1	-1	multi-exon	FALSE	canonical	3	31	junction_1	98.0848612172133	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGATGGAATTTCATA	NA	False	NA	18	True	AATAAA	-16	NA	101276486	101324191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_101276568_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
Isoform_131481_13	chr4	+	4356	6	FSM	ENSMUSG00000028527.19	ENSMUST00000106946.8	4360	6	0	4	0	-4	multi-exon	FALSE	canonical	3	20	junction_1	102.253410701062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATATGTGATGGAATTTC	NA	False	NA	15	True	AATAAA	-13	NA	101276485	101324188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_101276754_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
Isoform_131482_663	chr4	+	4078	5	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	415	9	1	-9	3prime_fragment	FALSE	canonical	3	206	junction_2	35.8355619462009	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCTTAATATGTGATGGA	NA	False	NA	10	True	AATAAA	-8	NA	101276930	101324183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
Isoform_13149_6	chr11	-	2853	4	FSM	ENSMUSG00000009900.8	ENSMUST00000010044.8	2761	4	-104	12	-104	-12	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAATAAGTTTGTGG	6070	False	NA	NA	False	AGTAAA	-7	NA	59181682	59138870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59140936_59147105_59147372_59165965_59166208_59181402
Isoform_131495_3	chr4	+	3328	2	ISM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	66	107524	66	-63829	5prime_fragment	FALSE	canonical	3	57	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	101353910	101392472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_101353961_101389194
Isoform_131496_48	chr4	+	5105	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	17	5	17	-4	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTTAGAAATATAC	NA	False	NA	2	True	ATTAAA	-10	NA	101353861	101499991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131497_51	chr4	+	5056	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	66	5	66	-4	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTTAGAAATATAC	NA	False	NA	2	True	ATTAAA	-10	NA	101353910	101499991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131498_4	chr4	+	5213	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	-91	5	-74	-4	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTTAGAAATATAC	NA	False	NA	2	True	ATTAAA	-10	NA	101353753	101499991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131499_3	chr4	+	5320	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	-198	5	-181	-4	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTTAGAAATATAC	NA	False	NA	2	True	ATTAAA	-10	NA	101353646	101499991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131500_4	chr4	+	5054	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	18	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	30.3264644237413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTTAGAAATATAC	NA	False	NA	2	True	ATTAAA	-10	NA	101353862	101499991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_101353961_101389194_101389260_101454997_101455149_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131502_32	chr4	+	5034	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	23	-4	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	23.5903830583462	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTTAGAAATATAC	NA	False	NA	2	True	ATTAAA	-10	NA	101353867	101499991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_101353961_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131503_8	chr4	+	5102	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	-29	-5	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	23.5903830583462	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101353798	101499990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_101353961_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131505_7	chr4	+	5256	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	-183	-5	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	23.5903830583462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101353644	101499990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_101353961_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131506_4	chr4	+	5391	20	NIC	ENSMUSG00000028528.18	novel	5258	19	NA	NA	-74	-5	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	27.8557821347373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	9122	False	NA	1	True	ATTAAA	-9	NA	101364993	101499990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_101365380_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131507_4	chr4	+	5338	19	FSM	ENSMUSG00000028528.18	ENSMUST00000038207.12	5258	19	-80	0	-80	0	multi-exon	FALSE	canonical	2	7	junction_1	26.7460046629791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	9116	False	NA	7	True	ATTAAA	-15	NA	101364987	101499996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_101365380_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131508_3	chr4	+	5124	20	NNC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	35.9756766090538	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	7	True	ATTAAA	-15	NA	101353918	101499996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_101353961_101361068_101361205_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_131510_10	chr4	+	5059	2	ISM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	32	1983	32	-1983	intron_retention	FALSE	canonical	3	622	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8247	False	NA	NA	False	NA	NA	NA	101504946	101514578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_101505023_101509595
Isoform_131511_745	chr4	+	1890	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	7	1	7	-1	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGTTGCATTTCATAA	8222	False	NA	7	True	AATAAA	-19	NA	101504921	101516560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
Isoform_131512_21	chr4	+	1929	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	-32	1	-32	-1	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGTTGCATTTCATAA	8183	False	NA	7	True	AATAAA	-19	NA	101504882	101516560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
Isoform_13152_3	chr11	-	718	3	NNC	ENSMUSG00000049291.7	novel	1243	5	NA	NA	1874	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	3.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGCCTCAGAGCTCCC	NA	False	NA	NA	False	ATTAAA	-11	NA	59264609	59263492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_59263997_59264251_59264395_59264538
Isoform_131520_3	chr4	+	4798	15	NIC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	48.1032584071781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATACTTGTGTGGTGT	2544	False	NA	9	True	ATTAAA	-10	NA	102971618	103022943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102971717_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131521_3	chr4	+	4861	15	NIC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	48.1032584071781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTGTGTGGTGTCT	2483	False	NA	11	True	ATTAAA	-12	NA	102971557	103022945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102971717_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131523_3	chr4	+	4753	15	NIC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	49.2859730842067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTTGTGTGGTGTCTAG	2551	False	NA	13	True	ATTAAA	-14	NA	102971625	103022947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102971717_102972756_102972858_102975477_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131524_8	chr4	+	4782	14	NIC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	-27	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	42.5459028127721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTGTGTGGTGTCT	2485	False	NA	11	True	ATTAAA	-12	NA	102971559	103022945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102971717_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131525_14	chr4	+	4706	14	NIC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	42.5459028127721	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTGTGTGGTGTCT	2561	False	NA	11	True	ATTAAA	-12	NA	102971635	103022945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102971717_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131526_9	chr4	+	4776	15	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	47.5884246772816	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTGTGTGGTGTCT	2872	False	NA	11	True	ATTAAA	-12	NA	102971946	103022945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102972021_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131527_4	chr4	+	4872	15	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-108	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	47.5884246772816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTGTGTGGTGTCT	2776	False	NA	11	True	ATTAAA	-12	NA	102971850	103022945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102972021_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131528_3	chr4	+	4852	15	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-88	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	47.8825625454441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTGTGGTGTCTAGT	2796	False	NA	14	True	ATTAAA	-15	NA	102971870	103022948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102972021_102972756_102972858_102975438_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131529_13	chr4	+	4706	14	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	41.8667935524905	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	2869	False	NA	15	True	ATTAAA	-16	NA	102971943	103022949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102972021_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131530_3	chr4	+	4789	14	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-99	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	41.8667935524905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTGTGGTGTCTAGT	2785	False	NA	14	True	ATTAAA	-15	NA	102971859	103022948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_102972021_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_131535_140	chr4	+	4644	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	103	5	-1	-2	multi-exon	FALSE	canonical	3	89	junction_1	18.0662361572323	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTGTGGTGTC	446	False	NA	10	True	ATTAAA	-11	NA	102976585	103022944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_13155_19	chr11	-	1961	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	132.4259793243	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGAGCCGGGTCTATA	NA	False	NA	-4	True	NA	NA	NA	59340847	59297966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333668_59340740
Isoform_131550_85	chr4	+	1866	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	35	14	35	-14	multi-exon	FALSE	canonical	3	69	junction_1	14.2560294261761	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGTCATCTGTCCTT	77	False	NA	2	True	AATAAA	-14	NA	103171043	103223626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
Isoform_131551_57	chr4	+	1905	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	1	9	1	-9	multi-exon	FALSE	canonical	3	69	junction_1	14.2560294261761	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCATCTGTCCTTGCCTT	43	False	NA	7	True	AATAAA	-19	NA	103171009	103223631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
Isoform_131555_26	chr4	+	1738	8	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	35	-13	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	32.5739347406756	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTCATCTGTCCTTG	77	False	NA	3	True	AATAAA	-15	NA	103171043	103223627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103188501_103188577_103210698_103210849_103223169
Isoform_131556_3	chr4	+	1585	7	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	34	-17	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	34.55631474693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCACTGTCATCTGTC	76	False	NA	-1	True	AATAAA	-11	NA	103171042	103223623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103188501_103188577_103223169
Isoform_131557_12	chr4	+	1967	10	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	31	-12	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	38.2935381197454	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTCATCTGTCCTTGC	73	False	NA	4	True	AATAAA	-16	NA	103171039	103223628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_103171081_103173440_103173536_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
Isoform_131559_18	chr4	+	1172	7	ISM	ENSMUSG00000028519.17	ENSMUST00000106830.9	5278	15	-33	64457	-33	5	5prime_fragment	FALSE	canonical	3	42	junction_1	2.40947204913349	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGTAACTTTCTTAG	NA	False	NA	13	True	AATAAA	-20	NA	104224753	104537584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266
Isoform_13156_10	chr11	-	2023	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-7	1	combination_of_known_junctions	TRUE	canonical	3	5	junction_5	134.676798298742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAGGAGCCGGGTCTA	NA	False	NA	-6	True	NA	NA	NA	59340840	59297968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333739_59340740
Isoform_131560_21	chr4	+	1085	8	NIC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	7.28991475552747	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACTGTTGTAACTTTC	NA	False	NA	9	True	AATAAA	-16	NA	104224754	104537580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104537387
Isoform_131561_5	chr4	+	5393	17	NNC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	20.376150274279	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTAGCCTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	104224768	104602039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104538794_104538861_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266_104589378_104598709
Isoform_131565_286	chr4	+	3058	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	92	9	92	-9	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACCAAGGCACTGGTGC	NA	False	NA	4	True	AATAAA	-14	NA	105014635	105089952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
Isoform_131569_21	chr4	+	3280	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	-123	2	-123	-2	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCACTGGTGCCTGAGCT	NA	False	NA	11	True	AATAAA	-21	NA	105014420	105089959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
Isoform_131571_169	chr4	+	3237	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	-83	5	-83	-5	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGGCACTGGTGCCTGA	NA	False	NA	8	True	AATAAA	-18	NA	105014460	105089956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
Isoform_13158_484	chr11	-	1900	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	-14	10	-6	0	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGAGGAGCCGGGTCT	NA	False	NA	-7	True	NA	NA	NA	59340839	59297969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
Isoform_13159_6	chr11	-	1766	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	-36	166	-28	-156	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGTCTGGCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	59340861	59298125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
Isoform_131590_4	chr4	+	2781	20	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-20	70057	1	10382	5prime_fragment	FALSE	canonical	3	60	junction_13	85.5799831619845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCTTTGTATTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	106173410	106228462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180
Isoform_131593_20	chr4	+	8913	68	FSM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-20	1682	1	-1677	multi-exon	TRUE	canonical	3	60	junction_13	48.8076771804264	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGATCTGCAATCATTTG	NA	False	NA	6	True	AATAAA	-14	NA	106173410	106296837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
Isoform_131594_5	chr4	+	5739	29	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	84778	-4	-27481	4	3prime_fragment	FALSE	canonical	3	78	junction_2	18.6584499651509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGAGTCTCACAGACT	NA	False	NA	16	True	AATAAA	-16	NA	106258208	106298523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
Isoform_131598_1393	chr4	+	4012	9	FSM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	16	0	16	0	multi-exon	FALSE	canonical	3	318	junction_6	36.7353287041235	1393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGTCATTTATTCAG	NA	False	NA	18	True	AATAAA	-18	NA	106418250	106446310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
Isoform_131614_14	chr4	+	3043	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106781.2	3046	2	3	0	-2	0	multi-exon	FALSE	canonical	3	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	False	NA	3	True	AATAAA	-18	NA	106508297	106512477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106508329_106509465
Isoform_131615_162	chr4	+	2200	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	-10	1	-2	1	multi-exon	FALSE	canonical	3	40	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTGTGTGTGTGTGT	NA	False	NA	4	True	AATAAA	-19	NA	106508292	106512478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106508329_106510314
Isoform_131616_4	chr4	+	2348	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	-158	1	-121	1	multi-exon	FALSE	canonical	3	40	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTGTGTGTGTGTGT	NA	False	NA	4	True	AATAAA	-19	NA	106508144	106512478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106508329_106510314
Isoform_131617_9	chr4	+	3052	2	FSM	ENSMUSG00000043572.8	ENSMUST00000146966.2	644	2	7	-2415	4	1	multi-exon	TRUE	canonical	2	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTGTGTGTGTGTGT	NA	False	NA	4	True	AATAAA	-19	NA	106508306	106512478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106508346_106509465
Isoform_131618_109	chr4	+	2202	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106782.2	502	2	42	-1742	5	1	multi-exon	FALSE	canonical	3	39	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTGTGTGTGTGTGT	NA	False	NA	4	True	AATAAA	-19	NA	106508307	106512478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106508346_106510314
Isoform_131619_13	chr4	+	1920	8	FSM	ENSMUSG00000034871.3	ENSMUST00000047620.3	1923	8	3	0	3	0	multi-exon	FALSE	canonical	2	3	junction_2	2.64189171555813	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACTGTGTAAGACCTGGG	2116	False	NA	4	True	NA	NA	NA	106591088	106605489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106591286_106592646_106592794_106599341_106599495_106600393_106600554_106602669_106602895_106603252_106603393_106604169_106604314_106604735
Isoform_131620_11	chr4	+	2292	5	FSM	ENSMUSG00000061887.15	ENSMUST00000132506.8	1128	5	-417	-747	-26	747	multi-exon	FALSE	canonical	3	191	junction_1	7.51664818918645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	106768640	106868478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875
Isoform_131623_57	chr4	+	2076	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-25	1144	-25	7	multi-exon	FALSE	canonical	3	121	junction_13	39.9235428457496	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	106768641	106905747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_131624_35	chr4	+	2222	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-25	998	-25	4	multi-exon	FALSE	canonical	3	121	junction_13	39.9235428457496	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTGGTTTATTTCAAAAG	NA	False	NA	16	True	AATAAA	-16	NA	106768641	106905893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_131627_7	chr4	+	3179	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	16	0	16	0	multi-exon	FALSE	canonical	3	121	junction_13	39.9235428457496	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCCTGACATACTTGT	NA	False	NA	16	True	ATTAAA	-20	NA	106768682	106906891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_131628_3	chr4	+	3094	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-45	146	-45	-146	multi-exon	TRUE	canonical	3	121	junction_13	39.9235428457496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTGTAGCTGTTTCTG	NA	False	NA	1	True	AAAAAG	-20	NA	106768621	106906745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_13163_7	chr11	-	1964	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-14	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	136.373604484152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGAGCCGGGTCTATA	NA	False	NA	-4	True	NA	NA	NA	59340847	59297966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329343_59333617_59333668_59340740
Isoform_131630_3	chr4	+	2438	17	NIC	ENSMUSG00000061887.15	novel	3195	18	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	121	junction_12	39.2825800291936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAGGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	106768691	106905691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_131633_8	chr4	+	2144	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	-92	-128	-29	3	multi-exon	FALSE	canonical	3	47	junction_5	51.1955503437555	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTGGTTTATTTCAAAA	NA	False	NA	15	True	AATAAA	-15	NA	106768637	106905892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_131636_3	chr4	+	3112	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	-61	-1127	2	0	multi-exon	FALSE	canonical	3	47	junction_5	51.1955503437555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCCTGACATACTTGT	NA	False	NA	16	True	ATTAAA	-20	NA	106768668	106906891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_131637_5	chr4	+	2514	7	FSM	ENSMUSG00000028621.18	ENSMUST00000106758.8	2516	7	6	-4	-2	4	multi-exon	FALSE	canonical	2	3	junction_1	4.2687494916219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACACTTTGTTTTGTCTGG	937	False	NA	20	True	ATTAAA	-20	NA	106924190	106943027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_106924243_106925808_106926021_106928066_106928216_106931069_106931158_106934872_106934978_106938087_106938292_106941323
Isoform_131639_1628	chr4	+	1449	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	317	9	-10	-7	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	1628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGAAGCTTGAGTGTT	NA	False	NA	6	True	ATTAAA	-18	NA	107035912	107058184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
Isoform_13164_42	chr11	-	1906	5	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-6	3	combination_of_known_splicesites	TRUE	canonical	3	14	junction_4	118.239957290249	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGAGCCGGGTCTATA	NA	False	NA	-4	True	NA	NA	NA	59340839	59297966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329343_59340740
Isoform_131646_80	chr4	+	1792	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	-18	1	-18	1	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGAGTGTTGGGCTTTC	NA	False	NA	14	True	ATTAAA	-26	NA	107035577	107058192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
Isoform_131654_85	chr4	+	611	6	FSM	ENSMUSG00000063172.14	ENSMUST00000106749.8	607	6	-9	5	-4	1	multi-exon	FALSE	canonical	3	216	junction_1	69.6746725862418	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCCATTTTTTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	107111090	107137130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107111160_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
Isoform_131656_46	chr4	+	650	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	-31	-11	-4	1	multi-exon	FALSE	canonical	3	140	junction_1	99.534114754691	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATTTTTTTTATATAAA	NA	False	NA	9	True	ATTAAA	-20	NA	107111090	107137136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
Isoform_131658_3	chr4	+	1473	12	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	171.075644184255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTCCTTCAGCTC	NA	False	NA	27	True	AGTAAA	-17	NA	107171576	107217018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107192205_107192317_107192845_107192905_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
Isoform_131659_242	chr4	+	1305	10	FSM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	15	1	-6	-1	multi-exon	FALSE	canonical	3	322	junction_9	32.5261528202145	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTCCTTCAGCTC	NA	False	NA	27	True	AGTAAA	-17	NA	107171574	107217018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
Isoform_13166_8	chr11	-	2813	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	0	599	0	-599	multi-exon	FALSE	canonical	2	7	junction_3	2.86744175568088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGTCTGTAGCTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	59363300	59352621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
Isoform_131661_7	chr4	+	1182	9	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	129.727599222371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	29	True	AGTAAA	-19	NA	107171574	107217020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107216803
Isoform_131662_3	chr4	+	1435	11	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	154.807105780064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTCCTTCAGCTC	NA	False	NA	27	True	AGTAAA	-17	NA	107171573	107217018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107206847_107206977_107207610_107207736_107216803
Isoform_131663_10	chr4	+	1399	12	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-6	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	168.126231600147	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGTGTGTCCTTCAGCT	NA	False	NA	26	True	AGTAAA	-16	NA	107171574	107217017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107197484_107197523_107197564_107197622_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
Isoform_131664_4	chr4	+	1138	8	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	134.15601639395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	28	True	AGTAAA	-18	NA	107171573	107217019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
Isoform_131667_730	chr4	+	4332	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	250	2	-18	-2	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGAATCTCTGTGTGT	NA	False	NA	20	True	AATAAA	-31	NA	107225230	107273541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
Isoform_13167_10	chr11	-	2790	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	23	599	23	-599	multi-exon	FALSE	canonical	2	7	junction_3	2.86744175568088	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGTCTGTAGCTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	59363277	59352621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
Isoform_131671_15	chr4	+	2601	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	-22	2005	-22	8	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCGTCTATGGCAGCCGA	NA	False	NA	19	True	AATAAA	-20	NA	107224958	107271538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
Isoform_131672_37	chr4	+	4523	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	58	3	-38	-3	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGAATCTCTGTGTG	NA	False	NA	19	True	AATAAA	-30	NA	107225038	107273540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
Isoform_131697_3	chr4	+	3936	17	NIC	ENSMUSG00000028613.16	novel	7391	19	NA	NA	-36	1	combination_of_known_junctions	TRUE	canonical	3	11	junction_4	21.0887262536171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTCATATGGATAAGAC	NA	False	NA	7	True	AATAAA	-18	NA	107659421	107730943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
Isoform_131700_3	chr4	+	4209	18	NIC	ENSMUSG00000028613.16	novel	3497	20	NA	NA	-40	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	26.5350848245035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTGTATAGAATTTTC	NA	False	NA	5	True	AATAAA	-14	NA	107659417	107731092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107705477_107705601_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
Isoform_131701_3	chr4	+	2941	19	NNC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	-47	43	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	26.8886593194975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATGTTTGAGTTGAGAG	NA	False	NA	NA	False	AATACA	-10	NA	107659410	107729921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469_107729618_107729637
Isoform_131703_5	chr4	+	4124	18	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	-37	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	22.8239842283367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATAGAATTTTCTT	NA	False	NA	7	True	AATAAA	-16	NA	107659420	107731094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
Isoform_131704_3	chr4	+	4186	19	NNC	ENSMUSG00000028613.16	novel	4555	19	NA	NA	-1	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	27.1406942422374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTCTTCATATGTAAC	NA	False	NA	17	True	AATAAA	-26	NA	107659486	107731104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469_107729618_107729637
Isoform_131705_3	chr4	+	4178	18	FSM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	286	154	-9	-1	multi-exon	FALSE	canonical	3	14	junction_17	23.2122745240813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGTTCATATGGATAAG	NA	False	NA	5	True	AATAAA	-16	NA	107659351	107730941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
Isoform_131706_8	chr4	+	4281	18	FSM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	338	-1	43	0	multi-exon	FALSE	canonical	3	14	junction_17	23.2122745240813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	9	True	AATAAA	-18	NA	107659403	107731096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
Isoform_131707_3	chr4	+	4330	18	FSM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	289	-1	-6	0	multi-exon	FALSE	canonical	3	14	junction_17	23.2122745240813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	9	True	AATAAA	-18	NA	107659354	107731096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
Isoform_131712_15	chr4	+	4086	17	NIC	ENSMUSG00000028613.16	novel	4555	19	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	16.2922527601311	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	9	True	AATAAA	-18	NA	107659421	107731096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
Isoform_131714_732	chr4	+	636	5	FSM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	27	29	27	8	multi-exon	FALSE	canonical	3	977	junction_1	47.9446295219809	732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATCTTTTTTTGTTATT	NA	False	NA	21	True	AATAAA	-23	NA	107736978	107744592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107737143_107738089_107738149_107740264_107740376_107742113_107742197_107744373
Isoform_131716_43	chr4	+	2606	7	FSM	ENSMUSG00000028608.16	ENSMUST00000120473.8	835	7	1	-1772	1	0	multi-exon	FALSE	canonical	3	475	junction_1	106.405931330082	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747066	107754315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069
Isoform_131720_198	chr4	+	698	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	33	2266	-3	0	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747042	107754315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
Isoform_131721_68	chr4	+	1358	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	49	1590	-1	-8	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATACTTGTGTGT	NA	False	NA	15	True	NA	NA	NA	107747058	107754991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
Isoform_131724_6	chr4	+	777	8	NIC	ENSMUSG00000028608.16	novel	2997	8	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	253.100609180118	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747080	107754315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_107747211_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
Isoform_131727_6	chr4	+	1538	7	NIC	ENSMUSG00000028608.16	novel	926	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	20	junction_6	269.974535836253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTTGTGTGTATTTA	NA	False	NA	20	True	NA	NA	NA	107747314	107754996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107753858
Isoform_131730_19	chr4	+	884	7	FSM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	-17	684	13	0	multi-exon	FALSE	canonical	3	677	junction_4	47.0558179187229	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747078	107754315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
Isoform_131735_3	chr4	+	3004	11	FSM	ENSMUSG00000008932.11	ENSMUST00000106713.5	3007	11	-10	13	-10	-7	multi-exon	TRUE	canonical	0	0	junction_7	1.32664991614216	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGACTTATGGATGTGAC	2384	False	NA	NA	False	AATAAA	-15	NA	107825518	107870716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_107825908_107834800_107834881_107850135_107850352_107859373_107859417_107861466_107861687_107864686_107864787_107865337_107865572_107866875_107867071_107867566_107867702_107868089_107868193_107869427
Isoform_131737_1046	chr4	+	1260	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	42	5	-9	-3	multi-exon	FALSE	canonical	3	713	junction_3	43.9463758530471	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCTTGTGCTGGAATT	NA	False	NA	19	True	AATAAA	-12	NA	108022675	108036500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
Isoform_131739_22	chr4	+	1511	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	-209	5	-209	-3	multi-exon	TRUE	canonical	3	713	junction_3	43.9463758530471	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCTTGTGCTGGAATT	NA	False	NA	19	True	AATAAA	-12	NA	108022424	108036500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
Isoform_13174_34	chr11	-	3622	10	NIC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-31	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	43.6750062717741	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397077	59376347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394590_59394973_59395081_59396653_59396789_59396989
Isoform_131743_109	chr4	+	1541	10	FSM	ENSMUSG00000028601.19	ENSMUST00000130942.8	1319	10	10	-232	10	-3	multi-exon	FALSE	canonical	3	90	junction_3	222.335582197522	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCTTGTGCTGGAATT	NA	False	NA	19	True	AATAAA	-12	NA	108022672	108036500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
Isoform_131749_17	chr4	+	3747	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	31	-64	-7	64	multi-exon	FALSE	canonical	3	432	junction_2	33.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGTGAGTATCAGCTTT	NA	False	NA	NA	False	AATAAA	-28	NA	108185367	108198805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108185488_108189407_108189549_108195319
Isoform_131751_336	chr4	+	889	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	30	2795	-8	66	multi-exon	FALSE	canonical	3	432	junction_2	33.5	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGGGTGTGTCTTAATT	NA	False	NA	55	True	AGTAAA	-38	NA	108185366	108195946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108185488_108189407_108189549_108195319
Isoform_131752_57	chr4	+	913	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	2	2799	2	62	multi-exon	FALSE	canonical	3	432	junction_2	33.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTATGGGGGTGTGTCTT	NA	False	NA	51	True	AGTAAA	-34	NA	108185338	108195942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108185488_108189407_108189549_108195319
Isoform_131761_32	chr4	+	5855	30	NIC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_25	27.6159322606615	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108317213	108416612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406422_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
Isoform_131762_93	chr4	+	5840	30	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	591	0	7	0	3prime_fragment	FALSE	canonical	3	91	junction_25	21.0061991869214	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108317213	108416612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
Isoform_131765_46	chr4	+	5852	30	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_25	25.401508283324	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108317213	108416612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
Isoform_131766_5	chr4	+	5855	30	NNC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_29	32.9423522707051	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATTCATCTGGTA	NA	False	NA	21	True	AATAAA	-21	NA	108317213	108416618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415914
Isoform_131770_30	chr4	+	4202	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	9	-1197	9	1197	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACATTTTTAAGGATT	5281	False	NA	12	True	AATAAA	-20	NA	108436659	108473227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
Isoform_131772_546	chr4	+	3002	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	9	3	9	-3	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGGTATGGTTTGG	5281	False	NA	18	True	NA	NA	NA	108436659	108472027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
Isoform_131776_47	chr4	+	3040	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	-29	3	2	-3	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGGTATGGTTTGG	5243	False	NA	18	True	NA	NA	NA	108436621	108472027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
Isoform_131790_19	chr4	+	2884	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGGTATGGTTTGG	5274	False	NA	18	True	NA	NA	NA	108436652	108472027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
Isoform_13180_281	chr11	-	3625	10	FSM	ENSMUSG00000020472.15	ENSMUST00000013262.15	4064	10	435	4	11	-4	multi-exon	FALSE	canonical	3	74	junction_1	26.5236907846458	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGTTTTCTTCTATCC	NA	False	NA	-5	True	AATAAA	-21	NA	59397035	59376349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
Isoform_131801_8	chr4	+	3369	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	27	-93	27	93	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCTGCTCTCTGTCAC	3560	False	NA	106	True	NA	NA	NA	108477163	108491413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
Isoform_131807_759	chr4	+	1289	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	61	9	27	-9	multi-exon	FALSE	canonical	3	773	junction_6	37.6592913133296	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTATGGTGGCCTTT	NA	False	NA	19	True	ATTAAA	-13	NA	108691858	108719315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
Isoform_131808_40	chr4	+	1339	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	11	9	11	-9	multi-exon	FALSE	canonical	3	773	junction_6	37.6592913133296	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTATGGTGGCCTTT	NA	False	NA	19	True	ATTAAA	-13	NA	108691808	108719315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
Isoform_131813_37	chr4	+	1137	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	49	2141	49	-2	multi-exon	FALSE	canonical	3	36	junction_4	5.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACAACCTGCTTGTTTC	NA	False	NA	2	True	ATTAAA	-13	NA	108736308	108798380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
Isoform_131817_76	chr4	+	3901	33	FSM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	-126	9	-11	-9	multi-exon	FALSE	canonical	1	36	junction_3	173.040085222326	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	9929	False	NA	30	True	AATAAA	-22	NA	108857840	108918349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108858362_108870706_108871038_108873848_108873983_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
Isoform_131821_132	chr4	+	3996	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	14	301	14	1	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCATCTGCCGTGG	9954	False	NA	21	True	AGTAAA	-23	NA	108857865	108918673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
Isoform_131822_1048	chr4	+	3704	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	-19	626	-19	-10	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACGTGTATTTAAAGAC	9921	False	NA	29	True	AATAAA	-21	NA	108857832	108918348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
Isoform_131848_78	chr4	+	5147	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	36	7	1	-7	multi-exon	FALSE	canonical	3	117	junction_16	21.9326225188771	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACTTTGTTATCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	109137500	109245007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
Isoform_13185_15	chr11	-	3377	10	FSM	ENSMUSG00000020472.15	ENSMUST00000101150.9	3771	10	392	2	-32	-2	multi-exon	FALSE	canonical	2	12	junction_6	45.5777723603659	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397078	59376347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394502_59394637_59394973_59395081_59396653_59396789_59396989
Isoform_131850_85	chr4	+	5038	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	-14	166	-14	-166	multi-exon	FALSE	canonical	3	117	junction_16	21.9326225188771	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTACTATATCATT	NA	False	NA	3	True	AATAAA	-13	NA	109137450	109244848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
Isoform_131857_4	chr4	+	5022	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-19	-5	combination_of_known_junctions	TRUE	canonical	3	29	junction_23	34.4426868398588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTTTGTTATCTTGTC	NA	False	NA	NA	False	AATAAA	-22	NA	109137445	109245009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
Isoform_131858_12	chr4	+	2884	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	34.4426868398588	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGTTCTGGTGTGCA	NA	False	NA	3	True	ATTAAA	-13	NA	109137464	109242890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
Isoform_131859_5	chr4	+	4727	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	7	-166	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	34.4426868398588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTACTATATCATT	NA	False	NA	3	True	AATAAA	-13	NA	109137579	109244848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
Isoform_13186_78	chr11	-	1773	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-20	-805	-17	-1	multi-exon	FALSE	canonical	3	85	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCATGTCTACCTT	NA	False	NA	-14	True	AATAAA	-15	NA	59678488	59674723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59676052_59678043
Isoform_131861_13	chr4	+	5162	25	FSM	ENSMUSG00000028552.14	ENSMUST00000175776.8	2802	25	-160	-2200	-16	-152	multi-exon	FALSE	canonical	3	25	junction_9	34.7439043414653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTTTGCATTGAAACTT	NA	False	NA	17	True	AATAAA	-27	NA	109137448	109244862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
Isoform_131863_8	chr4	+	5308	25	FSM	ENSMUSG00000028552.14	ENSMUST00000175776.8	2802	25	-160	-2346	-16	-6	multi-exon	FALSE	canonical	3	25	junction_9	34.7439043414653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACTTTGTTATCTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	109137448	109245008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
Isoform_131868_4	chr4	+	2033	18	FSM	ENSMUSG00000028555.16	ENSMUST00000064129.14	2356	18	59	264	17	99	multi-exon	TRUE	canonical	1	2	junction_14	2.90923835738311	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGGTGTTTAAAAAACC	NA	False	NA	NA	False	AATACA	-13	NA	109264342	109301678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_109264407_109273183_109273289_109278489_109278622_109279642_109279720_109280071_109280140_109283497_109283563_109285327_109285428_109286083_109286150_109288052_109288162_109288587_109288656_109288735_109288796_109290185_109290348_109295945_109296038_109297718_109297840_109299423_109299536_109299893_109300009_109300704_109300822_109301278
Isoform_131873_2528	chr4	+	2461	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	89	1918	89	-1918	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	2528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTCCCATCCATGAG	NA	False	NA	19	True	AATAAA	-11	NA	109533873	109819239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
Isoform_131874_1083	chr4	+	2536	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	24	1908	24	-1908	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCATGAGTATATGTTCC	NA	False	NA	29	True	AATAAA	-21	NA	109533808	109819249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
Isoform_131875_492	chr4	+	2553	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	-3	1918	-3	-1918	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTCCCATCCATGAG	NA	False	NA	19	True	AATAAA	-11	NA	109533781	109819239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
Isoform_13188_3	chr11	-	2226	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-20	-1258	-17	452	multi-exon	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGTTGAATCTGTAGA	NA	False	NA	NA	False	NA	NA	NA	59678488	59674270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59676052_59678043
Isoform_13189_30	chr11	-	1772	2	FSM	ENSMUSG00000043648.8	ENSMUST00000051493.8	1753	2	-20	1	-20	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCATGTCTACCTT	NA	False	NA	-14	True	AATAAA	-15	NA	59678491	59674723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59676052_59678047
Isoform_131903_8	chr4	+	1523	6	FSM	ENSMUSG00000028545.14	ENSMUST00000129760.8	1448	6	-71	-4	11	-3	multi-exon	FALSE	canonical	2	7	junction_2	5.19230199429887	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCCTTTGCATTTTTTT	NA	False	NA	5	True	AATAAA	-17	NA	111272213	111317121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_111272598_111288213_111288348_111290283_111290751_111305702_111305852_111311281_111311496_111316946
Isoform_131904_16	chr4	+	1470	6	FSM	ENSMUSG00000028545.14	ENSMUST00000030274.7	1826	6	-16	372	-16	-1	multi-exon	FALSE	canonical	3	7	junction_2	5.19230199429887	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTTGCATTTTTTTTG	NA	False	NA	7	True	AATAAA	-19	NA	111272186	111317123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_111272598_111288213_111288348_111290365_111290751_111305702_111305852_111311281_111311496_111316946
Isoform_131905_3	chr4	+	1831	6	FSM	ENSMUSG00000028545.14	ENSMUST00000030274.7	1826	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	7	junction_2	5.19230199429887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTGTTCTCATTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	111272197	111317495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_111272598_111288213_111288348_111290365_111290751_111305702_111305852_111311281_111311496_111316946
Isoform_131907_11	chr4	+	2448	13	NIC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	31.6318887973654	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTACCTCTGGTATTT	NA	False	NA	12	True	AATAAA	-27	NA	111577206	111686331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625896_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
Isoform_131910_19	chr4	+	2360	13	FSM	ENSMUSG00000034401.17	ENSMUST00000084354.4	2239	13	-164	43	3	-1	multi-exon	FALSE	canonical	3	19	junction_11	28.7691964897643	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGGTATTTTCATAGG	NA	False	NA	19	True	AATAAA	-34	NA	111577237	111686338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663180_111679937_111680030_111685382
Isoform_131912_81	chr4	+	2404	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	55	7	1	1	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTACCTCTGGTATTTT	NA	False	NA	13	True	AATAAA	-28	NA	111577235	111686332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
Isoform_131918_5	chr4	+	2240	11	NIC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	8	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	35.5550277738606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCTCTGGTATTTTCA	NA	False	NA	15	True	AATAAA	-30	NA	111577214	111686334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_111577455_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
Isoform_131921_80	chr4	+	5260	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	25	0	2	0	multi-exon	FALSE	canonical	3	47	junction_15	11.7923107892389	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGACTTCTCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	114857380	114900393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
Isoform_131924_12	chr4	+	5321	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	-35	-1	-35	1	multi-exon	TRUE	canonical	3	47	junction_15	11.7923107892389	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTGACTTCTCTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	114857320	114900394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
Isoform_131925_6	chr4	+	5019	16	NIC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	2	7	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	19.0251295805194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857380	114900400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
Isoform_131927_3	chr4	+	811	5	FSM	ENSMUSG00000028716.16	ENSMUST00000106548.9	887	5	38	38	38	-3	multi-exon	FALSE	canonical	1	1	junction_1	1.87082869338697	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGAGACTCTGACCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	114945957	114951058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_114946004_114946235_114946410_114948338_114948448_114950117_114950214_114950672
Isoform_131928_10	chr4	+	2274	2	ISM	ENSMUSG00000034210.15	ENSMUST00000132306.2	2368	4	-53	12381	-17	-12381	5prime_fragment	FALSE	canonical	3	178	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCTTAGAGAAGTTAAGT	NA	False	NA	NA	False	NA	NA	NA	115594923	115598748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_115596038_115597588
Isoform_131934_263	chr4	+	5679	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	4	-2891	4	-1	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTGACTAGAATTT	NA	False	NA	28	True	AATAAA	-17	NA	115594944	115634523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
Isoform_13194_21	chr11	-	3237	14	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-23	38	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	92.1306635794925	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700865	59682577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
Isoform_131941_22	chr4	+	4625	12	FSM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	-325	0	4	0	multi-exon	FALSE	canonical	3	13	junction_11	41.468099857422	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTGACTAGAATTTT	NA	False	NA	29	True	AATAAA	-18	NA	115594944	115634524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
Isoform_131945_91	chr4	+	1916	9	FSM	ENSMUSG00000028710.19	ENSMUST00000176047.8	2330	9	17	397	17	46	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATCAATCTAGATTTGCA	NA	False	NA	-2	True	AATAAA	-14	NA	115642027	115669114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
Isoform_131946_385	chr4	+	1736	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	29	395	29	48	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTAGATTTGCATG	NA	False	NA	0	True	AATAAA	-16	NA	115642209	115669116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
Isoform_13195_44	chr11	-	3004	14	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-97	36	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	92.1306635794925	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCCGACTACATGTT	NA	False	NA	-9	True	AATAAA	-13	NA	59700634	59682579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
Isoform_131952_16	chr4	+	4132	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	23	-1995	23	14	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTATTGACTTACACATT	NA	False	NA	NA	False	NA	NA	NA	115642203	115671506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
Isoform_131954_6	chr4	+	3993	8	NIC	ENSMUSG00000028710.19	novel	2330	9	NA	NA	28	48	intron_retention	FALSE	canonical	3	354	junction_5	25.5550625999976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTAGATTTGCATG	NA	False	NA	0	True	AATAAA	-16	NA	115642208	115669116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115657623_115668198
Isoform_131955_75	chr4	+	2895	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	40	junction_1	9.42809041582063	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTGGGAAGTGGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	115685277	115693382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
Isoform_131959_26	chr4	+	2552	14	FSM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	-2	2	-2	-2	multi-exon	FALSE	canonical	3	11	junction_1	55.5404857930697	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696427	115736445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115696479_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_131960_9	chr4	+	1388	9	FSM	ENSMUSG00000028708.17	ENSMUST00000153766.8	1377	9	-3	-8	-1	8	multi-exon	FALSE	canonical	3	99	junction_1	26.830195209875	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCGTGTCTTATTCTA	NA	False	NA	NA	False	TTTAAA	-20	NA	115696416	115731075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407
Isoform_131963_13	chr4	+	3834	12	ISM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	32	2	-3	-2	intron_retention	FALSE	canonical	3	99	junction_1	25.6792034067123	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696426	115736445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777
Isoform_131964_210	chr4	+	2517	13	FSM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	24	2	1	-2	multi-exon	FALSE	canonical	3	99	junction_1	27.9607860325055	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696418	115736445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_131965_11	chr4	+	2468	12	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	50.580432632484	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCCTTGGTGGTCC	NA	False	NA	12	True	AATAAA	-18	NA	115696427	115736449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115735146
Isoform_131966_6	chr4	+	4411	11	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	99	junction_1	26.6925083122587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696415	115736445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732743_115733777
Isoform_131967_6	chr4	+	3076	12	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	99	junction_1	28.8280740119709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696427	115736447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732743_115733777_115733822_115735146
Isoform_131968_10	chr4	+	2382	13	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	47.2622705995197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCCTTGGTGGTCC	NA	False	NA	12	True	AATAAA	-18	NA	115696418	115736449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731955_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_131969_10	chr4	+	2656	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	57.857302526313	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGTGGCAGCCTTGG	NA	False	NA	6	True	AATAAA	-12	NA	115696426	115736443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_115696479_115705416_115705560_115713764_115713914_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_13197_850	chr11	-	2884	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	209	344	-96	38	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700633	59682577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
Isoform_131975_15	chr4	+	2086	4	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	185	6823	-9	1622	5prime_fragment	FALSE	canonical	3	193	junction_3	29.3295452099452	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTAGATCTCTATTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	115932650	115947417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643
Isoform_13198_181	chr11	-	3115	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	-22	344	-22	38	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700864	59682577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
Isoform_131980_640	chr4	+	2983	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	82	0	82	0	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCCTTCTTGATGATT	NA	False	NA	9	True	AATAAA	-17	NA	115932547	115954240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
Isoform_131987_1010	chr4	+	2731	22	FSM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	-12	0	-12	0	multi-exon	FALSE	canonical	3	321	junction_9	36.7984644262092	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007702	116017041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
Isoform_131993_14	chr4	+	2812	21	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-11	0	intron_retention	FALSE	canonical	3	321	junction_9	37.3583658636188	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007703	116017041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
Isoform_131998_14	chr4	+	2731	22	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-21	0	intron_retention	TRUE	canonical	2	5	junction_1	91.9681498648807	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007693	116017041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_116007815_116008270_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
Isoform_132003_12	chr4	+	5308	10	FSM	ENSMUSG00000028698.14	ENSMUST00000030464.14	5257	10	-52	1	-9	-1	multi-exon	FALSE	canonical	2	5	junction_9	3.32591767713239	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTTTTGGTTTTCTTG	3239	False	NA	NA	False	AATAAA	-14	NA	116078805	116160252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116079611_116113364_116113474_116116741_116116841_116127984_116128166_116129935_116130062_116143252_116143396_116144019_116144197_116148871_116148947_116149293_116149465_116156830
Isoform_132005_3	chr4	+	2246	3	ISM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	50	21316	47	-21316	5prime_fragment	FALSE	canonical	3	66	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGGAGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	116364795	116374116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_116364848_116367718_116368061_116372264
Isoform_132006_9	chr4	+	1326	6	ISM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	65	8374	62	-8374	5prime_fragment	FALSE	canonical	3	66	junction_1	8.66256313108309	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTAGACATGTTCATT	NA	False	NA	NA	False	ATTAAA	-15	NA	116364810	116387058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867
Isoform_132007_52	chr4	+	4640	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	66	-2588	63	2580	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTGGAAATGTCAGT	NA	False	NA	23	True	ATTAAA	-15	NA	116364811	116398020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
Isoform_132008_62	chr4	+	2072	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	62	-16	59	8	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGGTATTTATGCCTT	NA	False	NA	NA	False	AATAAA	-35	NA	116364807	116395448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
Isoform_132017_191	chr4	+	3506	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	61	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	91.9456361117807	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTACTGAAGGAATT	NA	False	NA	14	True	AATAAA	-20	NA	116414915	116451081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002_116450640_116450662
Isoform_132019_471	chr4	+	3363	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	61	-143	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	91.9456361117807	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGAGAGTGGATTCTT	NA	False	NA	6	True	AATATA	-10	NA	116414915	116450936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002_116450637_116450657
Isoform_13202_21	chr11	-	3176	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	215	46	-90	3	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	59700627	59682279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
Isoform_132020_12	chr4	+	3483	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	-39	144	-39	-144	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGAGAGTGGATTCT	NA	False	NA	5	True	AATATA	-9	NA	116414815	116450935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
Isoform_132036_17054	chr4	+	930	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	56	1308	1	242	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	17054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGATTCATTCTTTA	NA	False	NA	30	True	ATTAAA	-15	NA	116542796	116556711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
Isoform_132037_287	chr4	+	1415	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	56	823	1	727	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTCATGCCTAGCT	NA	False	NA	8	True	NA	NA	NA	116542796	116557196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
Isoform_132059_3	chr4	+	1077	9	NIC	ENSMUSG00000028689.15	novel	1159	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	23.2671307857243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTCTGTAAATCTTG	5642	False	NA	16	True	AATAAA	-20	NA	116565791	116572301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_116565854_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
Isoform_13206_41	chr11	-	2846	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-98	38	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	74.517848346703	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700635	59682577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700525
Isoform_132060_6	chr4	+	1548	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	-335	0	-1	0	multi-exon	FALSE	canonical	3	19	junction_2	20.3239201040316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	5642	False	NA	15	True	AATAAA	-19	NA	116565791	116572300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
Isoform_132061_7	chr4	+	1447	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	-238	4	-12	0	multi-exon	FALSE	canonical	3	19	junction_2	20.3239201040316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	5739	False	NA	11	True	AATAAA	-15	NA	116565888	116572296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
Isoform_132062_133	chr4	+	2883	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	11	139	-10	1	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTAGCCTTATTTGTACC	NA	False	NA	NA	False	AATAAA	-18	NA	116578155	116661300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_132063_65	chr4	+	3032	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	15	-14	-6	14	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTGTATAGCTCTGGG	NA	False	NA	17	True	ATTAAA	-30	NA	116578159	116661453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_132065_6	chr4	+	2940	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	-48	141	-48	-1	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTAGCCTTATTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	116578096	116661298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_132068_6	chr4	+	3055	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	-16	-6	-16	6	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATTTTGCTGTATA	NA	False	NA	9	True	ATTAAA	-22	NA	116578128	116661445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_132069_4	chr4	+	3026	11	NIC	ENSMUSG00000033985.18	novel	3033	11	NA	NA	9	6	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	15.7445228571716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATTTTGCTGTATA	NA	False	NA	9	True	ATTAAA	-22	NA	116578153	116661445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658649_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_13207_24	chr11	-	3077	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-22	40	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	74.517848346703	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700864	59682575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700525
Isoform_132070_3	chr4	+	2730	10	NIC	ENSMUSG00000033985.18	novel	3033	11	NA	NA	7	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.0670428199288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGATTTTGCTGTATAG	NA	False	NA	10	True	ATTAAA	-23	NA	116578151	116661446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_116578454_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_132071_81	chr4	+	1726	17	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	43.6183286446191	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTCTGGGCTTTCTCT	NA	False	NA	36	True	AATAAA	-26	NA	116664950	116676638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
Isoform_132072_9	chr4	+	1754	17	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	59.4809580874417	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTGTGTGTGTATA	NA	False	NA	NA	False	AAGAAA	-22	NA	116664939	116675970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116675766
Isoform_132073_9	chr4	+	1932	16	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-4	3	intron_retention	FALSE	canonical	3	57	junction_1	44.8184485824011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGAACTTTCTGGGC	NA	False	NA	29	True	AATAAA	-19	NA	116664940	116676631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
Isoform_132074_3	chr4	+	2148	14	ISM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	20	661	5	-2	intron_retention	FALSE	canonical	3	103	junction_1	30.7634609974947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTATGTGTGTGTGTGT	NA	False	NA	NA	False	AAGAAA	-19	NA	116664939	116675967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
Isoform_132075_96	chr4	+	1633	16	FSM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	21	0	-4	0	multi-exon	FALSE	canonical	3	103	junction_1	29.5893374188894	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGAGAACTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	116664940	116676628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
Isoform_132076_3	chr4	+	1660	16	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	52.9651457721648	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATGTGTGTGTGTGTA	NA	False	NA	NA	False	AAGAAA	-20	NA	116664938	116675968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116675766
Isoform_132077_11	chr4	+	1840	15	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	0	-2	intron_retention	FALSE	canonical	3	103	junction_1	29.7890542834451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTTGGAGAACTTTC	NA	False	NA	24	True	AATAAA	-14	NA	116664934	116676626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
Isoform_132078_8	chr4	+	1570	15	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	52.7655577212319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGAGAACTTTCTGG	NA	False	NA	27	True	AATAAA	-17	NA	116664930	116676629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
Isoform_132082_19	chr4	+	5751	14	FSM	ENSMUSG00000033948.4	ENSMUST00000044823.4	5582	14	-176	7	-176	-7	multi-exon	FALSE	canonical	3	18	junction_2	3.89203404328416	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGAAATTGTGTTCT	NA	False	NA	NA	False	AATAAA	-27	NA	116734396	116846454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841879_116842044_116842878_116842961_116843667
Isoform_132086_224	chr4	+	3446	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	40	1097	40	731	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAGAATGTGCTTTT	NA	False	NA	5	True	AATAAA	-13	NA	116852553	116861377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
Isoform_132087_11	chr4	+	4570	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	10	3	10	-3	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGTATATATATGGATGT	NA	False	NA	NA	False	ATTAAA	-16	NA	116852523	116862471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
Isoform_13209_51	chr11	-	2882	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-99	38	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	78.4245479567605	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700636	59682577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695351_59695618_59698625_59698742_59700485
Isoform_132093_704	chr4	+	1529	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	26	0	20	0	multi-exon	FALSE	canonical	3	567	junction_7	49.9305302519377	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCAGTGGTAGAG	NA	False	NA	20	True	AATAAA	-20	NA	116876624	116944049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
Isoform_132095_10	chr4	+	3906	11	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	16	322	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_10	193.1	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGTCTTTTTGTTATT	NA	False	NA	NA	False	ATTAAA	-21	NA	116876620	116930779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116928138
Isoform_132103_27	chr4	+	4420	22	FSM	ENSMUSG00000028681.12	ENSMUST00000030443.12	4382	22	-38	0	-38	0	multi-exon	FALSE	canonical	3	5	junction_3	13.5888776715328	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGATGGCTGGAGTTTT	NA	False	NA	2	True	AATATA	-16	NA	116953233	116972580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_116953625_116954043_116954237_116961929_116962120_116962226_116962297_116962430_116962523_116963131_116963328_116965095_116965218_116965351_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
Isoform_132105_5	chr4	+	2789	11	ISM	ENSMUSG00000028681.12	ENSMUST00000144620.8	4356	22	13045	0	-1094	0	3prime_fragment	FALSE	canonical	3	21	junction_1	7.56042326857432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGATGGCTGGAGTTTT	NA	False	NA	2	True	AATATA	-16	NA	116966337	116972580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
Isoform_132106_29	chr4	+	2521	10	ISM	ENSMUSG00000028681.12	ENSMUST00000144620.8	4356	22	13406	0	-733	0	3prime_fragment	FALSE	canonical	3	29	junction_6	5.35412613473634	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGATGGCTGGAGTTTT	NA	False	NA	2	True	AATATA	-16	NA	116966698	116972580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
Isoform_132107_13	chr4	+	974	3	FSM	ENSMUSG00000048772.16	ENSMUST00000062824.12	991	3	18	-1	18	1	multi-exon	FALSE	canonical	3	16	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTATCTATCCTGGGGG	NA	False	NA	NA	False	AATAAA	-19	NA	117109165	117125778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_117109332_117123056_117123173_117125086
Isoform_132109_212	chr4	+	1705	9	FSM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	0	14	0	2	multi-exon	FALSE	canonical	3	273	junction_1	182.065535934179	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407561	117531480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_132112_14	chr4	+	1779	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_8	255.666011380082	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGTGTCTGGAGCCAC	NA	False	NA	10	True	AATAAA	-17	NA	117407552	117531479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
Isoform_132113_68	chr4	+	1707	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	238.585938395371	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407551	117531478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_117407928_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_132114_11	chr4	+	1340	7	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	1	-8	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	264.974212581778	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGTCCTAGTGTGTC	NA	False	NA	1	True	AATAAA	-8	NA	117407562	117531470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_117407928_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_132116_10	chr4	+	3947	8	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	348	junction_1	142.213550259991	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTAGTGTGTCTGGAGC	NA	False	NA	7	True	AATAAA	-14	NA	117407552	117531476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_132129_9	chr4	+	3221	14	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	28.5545258539791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692175	117726502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_117692345_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
Isoform_132130_4	chr4	+	3199	14	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-84	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	28.9097759923697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGATGTGCTTTGTCTG	NA	False	NA	28	True	AATGAA	-22	NA	117692445	117726503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_117692675_117700215_117700333_117713071_117713146_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
Isoform_132132_143	chr4	+	3318	14	FSM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	161	0	-121	0	multi-exon	FALSE	canonical	2	62	junction_6	13.9750411501337	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692408	117726502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
Isoform_132136_7	chr4	+	3434	13	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-126	0	intron_retention	FALSE	canonical	2	62	junction_6	14.1598022585063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692403	117726502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
Isoform_132140_30	chr4	+	929	8	FSM	ENSMUSG00000006395.17	ENSMUST00000194248.2	936	8	11	-4	2	4	multi-exon	FALSE	canonical	3	16	junction_1	6.43333157097011	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTATATTACAGGGGT	NA	False	NA	NA	False	ATTAAA	-20	NA	118217197	118219945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118217429_118217502_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
Isoform_132141_11	chr4	+	983	7	NIC	ENSMUSG00000006395.17	novel	936	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	22	junction_3	5.56776436283002	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGTATATTACAG	NA	False	NA	NA	False	ATTAAA	-16	NA	118217213	118219941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
Isoform_132144_223	chr4	+	1165	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	-21	1	-4	1	multi-exon	FALSE	canonical	3	450	junction_1	88.2754527349226	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCATTCCTTGTCCT	NA	False	NA	31	True	NA	NA	NA	118266541	118272307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
Isoform_132148_46	chr4	+	1125	7	FSM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	8	1	-4	1	multi-exon	FALSE	canonical	3	157	junction_2	198.998673920763	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCATTCCTTGTCCT	NA	False	NA	31	True	NA	NA	NA	118266541	118272307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118266584_118268081_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
Isoform_132150_6	chr4	+	1149	7	NIC	ENSMUSG00000006392.17	novel	1134	7	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	261.843093389067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCATTCCTTGTCCT	NA	False	NA	31	True	NA	NA	NA	118266567	118272307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_118266584_118268081_118268201_118268894_118269050_118269548_118269690_118269860_118269943_118270823_118271073_118271920
Isoform_132152_12	chr4	+	1283	7	NIC	ENSMUSG00000006392.17	novel	635	5	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	242.454577647489	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCATTCCTTGTCCT	NA	False	NA	31	True	NA	NA	NA	118266586	118272307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_118266747_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
Isoform_132155_7	chr4	+	1179	6	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	531	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	251.673280266301	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCATTCCTTGTCCT	NA	False	NA	31	True	NA	NA	NA	118268075	118272307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_118268201_118268854_118269050_118269548_118269690_118269860_118269943_118270823_118271073_118271920
Isoform_132157_106	chr4	+	1447	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	31	333	-1	7	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTGTGTGTAAATGA	NA	False	NA	8	True	ATTAAA	-21	NA	118285320	118289817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
Isoform_132158_69	chr4	+	1477	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	-1	335	-1	5	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTGTGTGTGTAAAT	NA	False	NA	6	True	ATTAAA	-19	NA	118285288	118289815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
Isoform_132159_6	chr4	+	912	3	FSM	ENSMUSG00000028536.13	ENSMUST00000030261.6	958	3	35	11	35	-11	multi-exon	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGCATAAGGAGTCTTT	8975	False	NA	NA	False	NA	NA	NA	118384474	118387414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118384535_118386395_118386509_118386675
Isoform_132165_105	chr4	+	2901	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	55	4	4	-4	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTTGGTCATGATGTC	NA	False	NA	2	True	NA	NA	NA	118478050	118484969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
Isoform_132166_2021	chr4	+	1113	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	50	1797	1	361	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATACTCTTGGGTTAAAA	NA	False	NA	17	True	AATAAA	-17	NA	118478045	118483176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
Isoform_13217_36	chr11	-	3177	13	NIC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-79	37	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	67.9384934252217	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700616	59682578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
Isoform_132181_3803	chr4	+	2512	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	93	655	0	-2	multi-exon	FALSE	canonical	3	565	junction_3	58.8236535946402	3803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTTCAAATGCTTG	669	False	NA	34	True	TATAAA	-16	NA	118966000	118994525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
Isoform_132182_157	chr4	+	2574	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	31	655	31	-2	multi-exon	TRUE	canonical	3	565	junction_3	58.8236535946402	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTTCAAATGCTTG	607	False	NA	34	True	TATAAA	-16	NA	118965938	118994525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
Isoform_132206_240	chr4	+	676	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	57	0	-44	0	multi-exon	FALSE	canonical	3	443	junction_2	4.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	119052559	119058495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119052684_119053068_119053219_119058093
Isoform_132207_14	chr4	+	763	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	-30	0	-30	0	multi-exon	FALSE	canonical	3	443	junction_2	4.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	119052472	119058495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119052684_119053068_119053219_119058093
Isoform_132211_1876	chr4	+	2589	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	2	597	2	3	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTTGTTCCAAGAGAGA	NA	False	NA	11	True	AATAAA	-23	NA	119090113	119105572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
Isoform_132212_306	chr4	+	3218	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	-27	-3	-27	0	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGGTTTGTGTAT	NA	False	NA	4	True	NA	NA	NA	119090084	119106172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
Isoform_132226_6	chr4	+	2964	13	FSM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	2	1823	2	-1823	multi-exon	FALSE	canonical	3	55	junction_6	28.6078611962206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCAGAAGCATTGGTCC	NA	False	NA	NA	False	GATAAA	-15	NA	119396859	119484493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
Isoform_132227_94	chr4	+	4756	13	FSM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	32	1	1	-1	multi-exon	FALSE	canonical	3	55	junction_6	28.6078611962206	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAGCCTGATGGTCTG	NA	False	NA	22	True	AATAAA	-18	NA	119396889	119486315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
Isoform_132229_5	chr4	+	5075	13	FSM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	-287	1	-287	-1	multi-exon	FALSE	canonical	3	55	junction_6	28.6078611962206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAGCCTGATGGTCTG	NA	False	NA	22	True	AATAAA	-18	NA	119396570	119486315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
Isoform_132231_119	chr4	+	4655	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	5	0	1	0	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119396889	119486316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
Isoform_132232_13	chr4	+	4726	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	-66	0	-39	0	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119396818	119486316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
Isoform_132234_3	chr4	+	4845	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	-185	0	-158	0	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119396699	119486316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
Isoform_132235_3	chr4	+	2955	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	-112	1817	-85	-1817	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCATTGGTCCTTCTCT	NA	False	NA	NA	False	GATAAA	-21	NA	119396772	119484499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
Isoform_132240_3	chr4	+	1383	3	FSM	ENSMUSG00000028634.18	ENSMUST00000136547.2	1359	3	-37	13	-13	-13	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTGCCAAGCAATGC	NA	False	NA	NA	False	ATTAAA	-19	NA	119671514	119730521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_119671988_119729233_119729470_119729847
Isoform_132241_4	chr4	+	3517	18	NIC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_4	22.223308316404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTTTTTAACCAGTTG	NA	False	NA	15	True	AATAAA	-17	NA	120262567	120387384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120313481_120313707_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
Isoform_132242_3	chr4	+	3697	18	NIC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-100	-7	intron_retention	FALSE	canonical	0	0	junction_4	22.223308316404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAATGCCCGTGTCTTTT	NA	False	NA	5	True	AATAAA	-7	NA	120262377	120387374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120313481_120313707_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
Isoform_132244_56	chr4	+	3384	17	FSM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	-34	3	-8	-3	multi-exon	FALSE	canonical	3	47	junction_13	8.94776508408664	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCGTGTCTTTTTAAC	NA	False	NA	9	True	AATAAA	-11	NA	120262469	120387378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
Isoform_132245_33	chr4	+	3482	17	FSM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	-126	-3	-100	1	multi-exon	FALSE	canonical	3	47	junction_13	8.94776508408664	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTTTTTAACCAGTTG	NA	False	NA	15	True	AATAAA	-17	NA	120262377	120387384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
Isoform_132246_5	chr4	+	3175	17	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_16	17.5316677757708	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTCTTTTTAACCAGTT	NA	False	NA	14	True	AATAAA	-16	NA	120262569	120387383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386444
Isoform_132247_7	chr4	+	1558	5	FSM	ENSMUSG00000000085.17	ENSMUST00000136801.8	1536	5	-23	1	-23	-1	multi-exon	FALSE	canonical	3	10	junction_1	26.8735464723211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGTGTCTTTTTAACCA	NA	False	NA	11	True	AATAAA	-13	NA	120374799	120387380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120374904_120379651_120379847_120382194_120382261_120385352_120385496_120386330
Isoform_132248_12	chr4	+	1837	4	FSM	ENSMUSG00000032890.18	ENSMUST00000132895.8	2099	4	21	241	18	-241	multi-exon	FALSE	canonical	3	46	junction_3	1.24721912892465	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACCTGTACACATCCTT	NA	False	NA	NA	False	NA	NA	NA	120712033	120741400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271
Isoform_132249_3	chr4	+	2126	4	FSM	ENSMUSG00000032890.18	ENSMUST00000132895.8	2099	4	-23	-4	-23	4	multi-exon	FALSE	canonical	3	46	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTTTTTCCTCCATAT	NA	False	NA	NA	False	NA	NA	NA	120711989	120741645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271
Isoform_132250_3	chr4	+	1722	4	FSM	ENSMUSG00000032890.18	ENSMUST00000132895.8	2099	4	-19	396	-19	-396	multi-exon	FALSE	canonical	3	46	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGGATCCTGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	120711993	120741245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271
Isoform_132251_8	chr4	+	2685	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	-15	3835	-12	1184	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGCTCTGGACTGCTG	NA	False	NA	NA	False	NA	NA	NA	120712000	120749941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
Isoform_132252_10	chr4	+	1736	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	-3	4772	0	247	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCTTGCCCATGGAAT	NA	False	NA	NA	False	NA	NA	NA	120712012	120749004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
Isoform_132254_39	chr4	+	6486	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	19	0	19	0	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGGCTTTCTGAGGAT	NA	False	NA	16	True	AATAAA	-21	NA	120712034	120753776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
Isoform_132256_155	chr4	+	2676	32	FSM	ENSMUSG00000028626.6	ENSMUST00000030372.6	2924	32	246	2	-117	-2	multi-exon	FALSE	canonical	3	39	junction_2	8.6239508704552	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACTTCTTGTGGATGA	NA	False	NA	19	True	AATAAA	-20	NA	120896827	120912517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
Isoform_132257_3	chr4	+	3013	31	NIC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-120	-4	intron_retention	FALSE	canonical	3	39	junction_2	8.74350552632575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGACTTCTTGTGGAT	NA	False	NA	17	True	AATAAA	-18	NA	120896824	120912515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
Isoform_132258_7	chr4	+	2637	31	NIC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-147	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	12.6901536633722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGTGGATGAGGATGG	NA	False	NA	25	True	AATAAA	-26	NA	120896797	120912523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_120896984_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
Isoform_13226_627	chr11	-	1592	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	53	1	27	-1	multi-exon	FALSE	canonical	3	608	junction_5	45.2577558304642	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTAATGTGTGTTCTCTC	NA	False	NA	-5	True	ATTAAA	-26	NA	59730611	59708621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
Isoform_132260_590	chr4	+	2288	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	5	88	1	-88	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	590	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGGTATCATTTTCAG	NA	False	NA	15	True	AATAAA	-13	NA	122730039	122752783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
Isoform_132268_130	chr4	+	3160	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	127	6	-28	-6	multi-exon	FALSE	canonical	3	37	junction_1	34.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTCAGAGTGGGGG	3598	False	NA	NA	False	AATAAA	-12	NA	122889863	122896272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_122889944_122890306_122890812_122893697
Isoform_13227_434	chr11	-	1641	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	4	1	4	-1	multi-exon	FALSE	canonical	3	608	junction_5	45.2577558304642	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTAATGTGTGTTCTCTC	NA	False	NA	-5	True	ATTAAA	-26	NA	59730660	59708621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
Isoform_132270_106	chr4	+	3185	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	102	6	-53	-6	multi-exon	FALSE	canonical	3	37	junction_1	34.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTCAGAGTGGGGG	3573	False	NA	NA	False	AATAAA	-12	NA	122889838	122896272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_122889944_122890306_122890812_122893697
Isoform_132271_25	chr4	+	3298	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	-11	6	-11	-6	multi-exon	FALSE	canonical	3	37	junction_1	34.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTCAGAGTGGGGG	3460	False	NA	NA	False	AATAAA	-12	NA	122889725	122896272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_122889944_122890306_122890812_122893697
Isoform_132272_151	chr4	+	3548	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	-53	6	-53	-6	multi-exon	FALSE	canonical	3	106	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTCAGAGTGGGGG	3573	False	NA	NA	False	AATAAA	-12	NA	122889838	122896272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_122890812_122893697
Isoform_132273_11	chr4	+	3643	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	-148	6	7	-6	multi-exon	FALSE	canonical	3	106	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTCAGAGTGGGGG	3478	False	NA	NA	False	AATAAA	-12	NA	122889743	122896272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_122890812_122893697
Isoform_132277_232	chr4	+	2061	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	0	13	0	-13	multi-exon	FALSE	canonical	3	89	junction_3	10.336343647538	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTCTATACAGCATG	NA	False	NA	13	True	AATAAA	-17	NA	122910389	122948729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
Isoform_132279_7	chr4	+	1949	10	FSM	ENSMUSG00000028653.17	ENSMUST00000147165.8	1964	10	2	13	2	-13	multi-exon	FALSE	canonical	3	16	junction_8	29.573929126016	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTCTATACAGCATG	NA	False	NA	13	True	AATAAA	-17	NA	122910391	122948729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122946276_122946395_122947915
Isoform_132280_3	chr4	+	1947	10	NIC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	30.5593936983356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	NA	False	NA	12	True	AATAAA	-16	NA	122910389	122948728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122943269_122943348_122945858_122945969_122946276_122946395_122947915
Isoform_132281_4	chr4	+	1835	9	NIC	ENSMUSG00000028653.17	novel	1964	10	NA	NA	2	-14	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	40.8893323496484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	NA	False	NA	12	True	AATAAA	-16	NA	122910391	122948728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122943269_122943348_122946276_122946395_122947915
Isoform_132282_4	chr4	+	1811	9	NIC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	-6	-13	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	42.1070065428546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTCTATACAGCATG	NA	False	NA	13	True	AATAAA	-17	NA	122910383	122948729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122942561_122942674_122943269_122943348_122945858_122945969_122946276_122946395_122947915
Isoform_132283_4	chr4	+	2145	12	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	39.9505893170158	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	NA	False	NA	12	True	AATAAA	-16	NA	122910389	122948728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122938958_122939044_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
Isoform_132284_4	chr4	+	2191	7	FSM	ENSMUSG00000002384.3	ENSMUST00000002457.2	2940	7	-6	755	-6	-755	multi-exon	FALSE	canonical	2	3	junction_1	4.18993502999218	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGATCCATAGTCCTTG	110	False	NA	NA	False	ATTAAA	-17	NA	122998951	123019129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_122999469_123008360_123008551_123008938_123009088_123015678_123015874_123016308_123016389_123016739_123016851_123018180
Isoform_132286_56	chr4	+	3082	15	FSM	ENSMUSG00000011257.20	ENSMUST00000106241.8	3050	15	-44	12	-37	-2	multi-exon	FALSE	canonical	3	39	junction_10	103.994922364272	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTGAATTTGATGC	NA	False	NA	-4	True	AATAAA	-19	NA	123176580	123192613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
Isoform_132293_514	chr4	+	3128	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	-123	14	-37	-4	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGCTGAATTTGAT	NA	False	NA	-6	True	AATAAA	-17	NA	123176580	123192611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
Isoform_132302_22	chr4	+	3236	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	-229	12	-143	-2	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTGAATTTGATGC	NA	False	NA	-4	True	AATAAA	-19	NA	123176474	123192613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
Isoform_132307_73	chr4	+	3088	15	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_14	92.6910602650613	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTGAATTTGATGC	NA	False	NA	-4	True	AATAAA	-19	NA	123176580	123192613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
Isoform_132313_103	chr4	+	3041	14	FSM	ENSMUSG00000011257.20	ENSMUST00000106243.8	3111	14	-37	107	-37	-4	multi-exon	FALSE	canonical	3	64	junction_10	102.125111806737	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGCTGAATTTGAT	NA	False	NA	-6	True	AATAAA	-17	NA	123176580	123192611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191887_123192305
Isoform_132317_14	chr4	+	3001	14	NNC	ENSMUSG00000011257.20	novel	3111	14	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_10	120.71542162355	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTGAATTTGATGC	NA	False	NA	-4	True	AATAAA	-19	NA	123176580	123192613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191845_123192305
Isoform_132347_5	chr4	+	381	4	FSM	ENSMUSG00000028647.14	ENSMUST00000106202.4	1536	4	88	1067	-39	286	multi-exon	FALSE	canonical	3	305	junction_3	15.9652400197707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGATTATCTGACCAAA	NA	False	NA	NA	False	NA	NA	NA	123798794	123803802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629
Isoform_132349_87	chr4	+	1500	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	172	13	-37	-13	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTGTTAATCCTTTT	NA	False	NA	27	True	NA	NA	NA	123798796	123806049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
Isoform_132351_13	chr4	+	2341	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	171	-827	-38	827	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTTTAATGTTATAT	NA	False	NA	NA	False	NA	NA	NA	123798795	123806889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
Isoform_132354_4	chr4	+	3283	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	171	-1769	-38	1769	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGCCTTGCAAACTAT	NA	False	NA	NA	False	NA	NA	NA	123798795	123807831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
Isoform_132356_3	chr4	+	1500	4	FSM	ENSMUSG00000028647.14	ENSMUST00000137685.2	500	4	8	-1008	8	-19	multi-exon	FALSE	canonical	3	284	junction_3	24.8596057893121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTTGTTTTGTTAAT	NA	False	NA	21	True	NA	NA	NA	123798936	123806043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123799100_123803426_123803476_123803629_123803760_123804885
Isoform_132358_1002	chr4	+	2565	7	FSM	ENSMUSG00000028646.17	ENSMUST00000030399.7	2593	7	22	6	-6	-2	multi-exon	FALSE	canonical	3	488	junction_1	23.3553467587664	1002	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCAGTGTTTGTTGTGTG	NA	False	NA	14	True	AATAAA	-14	NA	123811260	123830784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
Isoform_132364_3	chr4	+	1707	6	FSM	ENSMUSG00000032643.13	ENSMUST00000038684.6	1664	6	-43	0	-24	0	multi-exon	FALSE	canonical	1	2	junction_2	1.93907194296653	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGCCCCGTGTATTTG	NA	False	NA	4	True	AATAAA	-15	NA	124594469	124602404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124594645_124599405_124599583_124599676_124599852_124601046_124601217_124601309_124601524_124601608
Isoform_132367_909	chr4	+	1760	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	40	20	40	-20	multi-exon	FALSE	canonical	3	1027	junction_12	104.342509913266	909	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTTCTGAAACCC	NA	False	NA	31	True	AATAAA	-18	NA	124608608	124626233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
Isoform_13237_19	chr11	-	1608	2	FSM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	0	3	0	-3	multi-exon	FALSE	canonical	3	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTGCTTTGCTTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	59855770	59854009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59855193_59855345
Isoform_132377_12	chr4	+	3804	24	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	3	-2	combination_of_known_junctions	FALSE	non_canonical	1	2	junction_1	65.4918861047508	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGGTTCTCTCTTTTT	NA	False	NA	20	True	AATATA	-28	NA	124635667	124695302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_124635710_124636234_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
Isoform_132378_77	chr4	+	3795	24	FSM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	14	0	6	0	multi-exon	FALSE	non_canonical	1	6	junction_2	64.214933278441	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124635656	124695304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124635710_124636256_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
Isoform_13238_12	chr11	-	964	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	-5	2	-1	-2	multi-exon	FALSE	canonical	3	19	junction_6	8.67307455417179	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTCTGGTCTCCTTCC	NA	False	NA	-1	True	AATAAA	-17	NA	59937312	59861441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
Isoform_132380_146	chr4	+	3008	18	ISM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	9735	0	9707	0	3prime_fragment	FALSE	canonical	3	118	junction_11	23.4933547256022	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124645377	124695304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
Isoform_132381_232	chr4	+	2979	18	ISM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	9764	0	9736	0	3prime_fragment	FALSE	canonical	3	118	junction_11	23.4933547256022	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124645406	124695304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
Isoform_132384_32	chr4	+	782	2	FSM	ENSMUSG00000028890.14	ENSMUST00000147452.2	781	2	0	-1	0	1	multi-exon	FALSE	canonical	3	116	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAATTCATGTTTATAC	352	False	NA	5	True	AATAAA	-16	NA	124696374	124699172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124696437_124698452
Isoform_132387_93	chr4	+	2701	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	21	4909	-12	-4488	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGTGGTTTCCATCA	340	False	NA	8	True	CATAAA	-12	NA	124696362	124738684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
Isoform_13239_7	chr11	-	1031	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	-76	6	-68	-6	multi-exon	FALSE	canonical	3	19	junction_6	8.67307455417179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCACCTCTCTGGTCTCC	NA	False	NA	-5	True	AATAAA	-13	NA	59937383	59861445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
Isoform_132391_18	chr4	+	2715	11	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	-12	-4471	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	26.0967430918113	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGGTACTGCCCATC	340	False	NA	25	True	CATAAA	-29	NA	124696362	124738701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736323_124736385_124737939
Isoform_132393_3	chr4	+	7192	11	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	-14	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	26.0967430918113	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTACATGTGGCATTACT	338	False	NA	NA	False	ATTAAA	-39	NA	124696360	124743176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736323_124736385_124737939
Isoform_132397_536	chr4	+	1545	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	85	4	85	-4	multi-exon	FALSE	canonical	3	475	junction_1	43.7121264639459	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGTAAATGGTTTAT	1619	False	NA	39	True	ATTAAA	-14	NA	124744556	124749031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
Isoform_13240_3	chr11	-	998	7	FSM	ENSMUSG00000000301.17	ENSMUST00000000310.14	953	7	-48	3	-36	-3	multi-exon	FALSE	canonical	0	0	junction_6	14.4846662217517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTCTGGTCTCCTTC	NA	False	NA	-2	True	AATAAA	-16	NA	59937351	59861442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937169
Isoform_132401_21	chr4	+	2057	4	FSM	ENSMUSG00000028889.18	ENSMUST00000144851.3	724	4	-573	-760	99	-4	multi-exon	FALSE	canonical	3	495	junction_1	37.6061460697879	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGTAAATGGTTTAT	1633	False	NA	39	True	ATTAAA	-14	NA	124744570	124749031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124745601_124745692_124745813_124747666_124747810_124748267
Isoform_132404_3	chr4	+	2953	6	ISM	ENSMUSG00000028876.8	ENSMUST00000149146.2	4660	15	27854	0	14251	0	3prime_fragment	FALSE	canonical	1	1	junction_3	2.0591260281974	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTGTCCTTGTTGA	2889	False	NA	19	True	AATAAA	-21	NA	124807445	124811593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_124807508_124807717_124807922_124808155_124808306_124808473_124808668_124809071_124809228_124809406
Isoform_132405_8	chr4	+	2846	6	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	-4	6	intron_retention	FALSE	non_canonical	2	3	junction_1	16.1616830806695	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGTAAATATATTACTT	NA	False	NA	11	True	AATAAA	-25	NA	124830846	124838455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_124830881_124830971_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
Isoform_132406_3	chr4	+	818	3	FSM	ENSMUSG00000044730.18	ENSMUST00000233530.2	1203	3	-1	386	-1	-386	multi-exon	FALSE	canonical	3	26	junction_1	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	124830849	124832861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124830884_124830971_124831127_124832232
Isoform_132407_4	chr4	+	4767	4	FSM	ENSMUSG00000044730.18	ENSMUST00000233434.2	4749	4	-17	-1	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.7806410858642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACATTTGGTAAATATA	NA	False	NA	5	True	AATAAA	-19	NA	124830840	124838449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124830884_124830971_124831127_124832232_124832511_124834158
Isoform_132408_4	chr4	+	2951	5	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	1	2	intron_retention	FALSE	non_canonical	3	26	junction_1	9.33742469849155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTGGTAAATATATT	NA	False	NA	7	True	AATAAA	-21	NA	124830851	124838451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_124830884_124830971_124831127_124832232_124832511_124834158_124834339_124836145
Isoform_132409_47	chr4	+	2838	6	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	1	0	intron_retention	FALSE	non_canonical	3	26	junction_1	9.3936148526539	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACATTTGGTAAATATA	NA	False	NA	5	True	AATAAA	-19	NA	124830851	124838449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_124830884_124830971_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
Isoform_132410_3	chr4	+	2891	5	FSM	ENSMUSG00000044730.18	ENSMUST00000094769.13	2911	5	20	0	20	0	multi-exon	FALSE	non_canonical	3	27	junction_4	9.02773504263389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACATTTGGTAAATATA	NA	False	NA	5	True	AATAAA	-19	NA	124830886	124838449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
Isoform_132416_1255	chr4	+	2330	16	FSM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	26	10	26	-10	multi-exon	FALSE	canonical	3	650	junction_4	51.4673575083168	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGCCATTAGGAACT	NA	False	NA	14	True	ATTAAA	-8	NA	124923810	124949159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
Isoform_132418_20	chr4	+	2928	15	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	26	-11	intron_retention	FALSE	canonical	3	650	junction_4	52.8467653905601	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATGCCATTAGGAAC	NA	False	NA	13	True	ATTAAA	-7	NA	124923810	124949158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124947328_124947934_124948021_124948976
Isoform_132428_26	chr4	+	2400	4	NIC	ENSMUSG00000050213.7	novel	2345	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	40.7785346584314	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGAGGGTATTACTTTT	NA	False	NA	14	True	AATAAA	-20	NA	124960492	124967835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_124960746_124961799_124961986_124964899_124965484_124966458
Isoform_132429_260	chr4	+	2312	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	21	12	-9	-12	multi-exon	FALSE	canonical	3	77	junction_1	6.84754619472471	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGCCTCATTTTAGAG	NA	False	NA	2	True	AATAAA	-8	NA	124960485	124967823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
Isoform_132430_125	chr4	+	2352	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	21	-28	-9	28	multi-exon	FALSE	canonical	3	77	junction_1	6.84754619472471	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTGTTCATAGGTGT	NA	False	NA	42	True	AATATA	-35	NA	124960485	124967863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
Isoform_132433_14	chr4	+	1052	6	NIC	ENSMUSG00000028863.14	novel	872	6	NA	NA	-23	379	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	120.208818312135	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCATCAACAGATTCTT	NA	False	NA	14	True	ATTAAA	-20	NA	124978903	124997675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_124997222
Isoform_132434_81	chr4	+	1236	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	-6	-176	-6	1	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCAGCTGCCTCTTTG	NA	False	NA	41	True	ACTAAA	-17	NA	124978950	125003683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
Isoform_132435_5	chr4	+	1412	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	-3	-355	-3	180	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCATGTGCTCCTTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	124978953	125003862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
Isoform_132438_26	chr4	+	1217	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	-15	3348	-15	1	multi-exon	TRUE	canonical	3	173	junction_5	63.7427555796648	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCAGCTGCCTCTTTG	NA	False	NA	41	True	ACTAAA	-17	NA	124978911	125003683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
Isoform_132439_117	chr4	+	1172	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	28	3350	-2	-1	multi-exon	FALSE	canonical	3	173	junction_5	63.7427555796648	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGGGCAGCTGCCTCTT	NA	False	NA	39	True	ACTAAA	-15	NA	124978954	125003681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
Isoform_132442_22	chr4	+	4519	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	31	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	63.7427555796648	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTGCTGATACTGAAAT	NA	False	NA	NA	False	NA	NA	NA	124978957	125007031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
Isoform_132443_25	chr4	+	862	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	11	-1	-2	1	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCAGCTGCCTCTTTG	NA	False	NA	41	True	ACTAAA	-17	NA	124978954	125003683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
Isoform_132445_12	chr4	+	911	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	-32	-7	-15	7	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGCCTCTTTGGCTTCT	NA	False	NA	47	True	ACTAAA	-23	NA	124978911	125003689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
Isoform_132447_3	chr4	+	2059	10	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	-4	-53527	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	7.70441592149321	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCGGATGCCTGGACTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	125384488	125554439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125553841
Isoform_132452_709	chr4	+	887	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	53	-3	1	3	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATGGAAGATGGCCT	NA	False	NA	30	True	AATAAA	-15	NA	125940770	125949328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
Isoform_132453_34	chr4	+	912	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	28	-3	-24	3	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATGGAAGATGGCCT	NA	False	NA	30	True	AATAAA	-15	NA	125940745	125949328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
Isoform_132456_13	chr4	+	2970	7	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	7	2	intron_retention	FALSE	canonical	3	1282	junction_6	49.8745648825353	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGATGGAAGATGGCC	NA	False	NA	29	True	AATAAA	-14	NA	125940776	125949327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125947352_125948753_125948946_125949172
Isoform_132462_26	chr4	+	1445	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	38	3530	-1	1	multi-exon	FALSE	canonical	3	15	junction_8	4.26296135405575	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTCCCCATTATTCTCA	2401	False	NA	8	True	AATATA	-18	NA	125952395	125982458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
Isoform_132463_16	chr4	+	778	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	31	-1	24	1	multi-exon	FALSE	canonical	3	54	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCTGTGCCTGATGCCC	NA	False	NA	28	True	CATAAA	-19	NA	125990476	125992375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125990501_125991621
Isoform_132464_16	chr4	+	802	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	5	1	-2	-1	multi-exon	FALSE	canonical	3	54	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACGTCTGTGCCTGATGC	NA	False	NA	26	True	CATAAA	-17	NA	125990450	125992373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125990501_125991621
Isoform_132465_195	chr4	+	843	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	96	4	59	-1	multi-exon	FALSE	canonical	3	289	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACGTCTGTGCCTGATGC	NA	False	NA	26	True	CATAAA	-17	NA	125990511	125992373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125990603_125991621
Isoform_132466_7	chr4	+	901	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	38	4	1	-1	multi-exon	FALSE	canonical	3	289	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACGTCTGTGCCTGATGC	NA	False	NA	26	True	CATAAA	-17	NA	125990453	125992373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125990603_125991621
Isoform_132468_8	chr4	+	3790	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	98	-2945	61	2945	multi-exon	FALSE	canonical	3	289	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCCGGCTTGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	125990513	125995322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125990603_125991621
Isoform_132470_14	chr4	+	3563	12	NIC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	-3	1	combination_of_known_junctions	TRUE	canonical	3	9	junction_1	134.390389758733	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTAGCCTGCCTCTGT	NA	False	NA	23	True	AATAAA	-24	NA	125997761	126034823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_125997940_126012066_126012134_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
Isoform_132472_14	chr4	+	3677	12	NIC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	134.010422685811	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGTCTGTAGCCTGCC	NA	False	NA	18	True	AATAAA	-19	NA	125997764	126034818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_125997940_126012066_126012256_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
Isoform_132474_832	chr4	+	3490	11	FSM	ENSMUSG00000042608.16	ENSMUST00000094761.11	3492	11	0	2	0	-1	multi-exon	FALSE	canonical	3	325	junction_5	16.9944108459223	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTGTAGCCTGCCTC	NA	False	NA	20	True	AATAAA	-21	NA	125997764	126034820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125997940_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
Isoform_132484_146	chr4	+	964	3	FSM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	731	-6	-57	5	multi-exon	FALSE	canonical	3	53	junction_1	143	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCACTGGTTACTACTG	7073	False	NA	26	True	AATGAA	-21	NA	126042267	126043673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126042425_126042676_126042839_126043028
Isoform_132485_454	chr4	+	890	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	472	2	-57	-1	multi-exon	FALSE	canonical	3	244	junction_1	47.5	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGTCTCTCACTGGTT	7073	False	NA	19	True	AATGAA	-14	NA	126042267	126043666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126042425_126042743_126042839_126043028
Isoform_132490_104	chr4	+	797	2	NIC	ENSMUSG00000050212.5	novel	1364	3	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	7073	False	NA	21	True	AATGAA	-16	NA	126042267	126043668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126042425_126043028
Isoform_132492_83	chr4	+	1209	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	-57	-8	-57	-1	multi-exon	FALSE	canonical	3	339	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGTCTCTCACTGGTT	7073	False	NA	19	True	AATGAA	-14	NA	126042267	126043666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126042839_126043028
Isoform_132493_10	chr4	+	1284	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	-131	-9	-131	0	multi-exon	FALSE	canonical	3	339	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTCTCACTGGTTA	6999	False	NA	20	True	AATGAA	-15	NA	126042193	126043667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126042839_126043028
Isoform_132494_466	chr4	+	1284	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	51	1	-24	-1	multi-exon	FALSE	canonical	3	345	junction_3	21.2882009573378	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCCTGTTTTCCTTC	7676	False	NA	44	True	AATAAA	-24	NA	126156168	126169675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
Isoform_132496_8	chr4	+	2106	4	NIC	ENSMUSG00000028847.9	novel	1336	5	NA	NA	-31	-1	intron_retention	FALSE	canonical	3	373	junction_3	14.0554457615387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCCTGTTTTCCTTC	7669	False	NA	44	True	AATAAA	-24	NA	126156161	126169675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126156331_126166470_126166569_126166767_126167866_126168934
Isoform_132498_6	chr4	+	5258	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-13	10	intron_retention	FALSE	canonical	1	13	junction_1	25.1900760331436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTAGTGGTCATTTCTT	NA	False	NA	40	True	AATAAA	-33	NA	126450774	126487706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
Isoform_132500_5	chr4	+	5253	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-16	5	intron_retention	FALSE	canonical	2	10	junction_4	23.6806003583806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCTCTAGTGGTCAT	NA	False	NA	35	True	AATAAA	-28	NA	126450771	126487701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455698_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
Isoform_132502_4	chr4	+	4973	26	FSM	ENSMUSG00000042489.16	ENSMUST00000048391.15	5027	26	64	-10	4	10	multi-exon	FALSE	canonical	1	1	junction_10	26.925794324402	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTAGTGGTCATTTCTT	NA	False	NA	40	True	AATAAA	-33	NA	126450791	126487706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467102_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
Isoform_132504_32	chr4	+	5256	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-9	0	intron_retention	FALSE	canonical	1	26	junction_4	21.999842171151	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	30	True	AATAAA	-23	NA	126450778	126487696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
Isoform_132507_25	chr4	+	5026	26	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-9	11	combination_of_known_junctions	FALSE	canonical	1	26	junction_4	22.9307130285999	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTAGTGGTCATTTCTTC	NA	False	NA	41	True	AATAAA	-34	NA	126450778	126487707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
Isoform_132508_9	chr4	+	5000	26	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_25	24.64	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	30	True	AATAAA	-23	NA	126450796	126487696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486832
Isoform_132511_3168	chr4	+	816	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	37	6	-12	-6	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	3168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGATCTTTCTGGGTTTG	5417	False	NA	13	True	AATAAA	-15	NA	126571459	126603501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
Isoform_132522_42	chr4	+	4277	21	ISM	ENSMUSG00000028830.15	ENSMUST00000102608.10	4073	24	-11	15734	0	0	5prime_fragment	FALSE	canonical	2	17	junction_1	12.2363188909083	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647336	126748129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_126647456_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
Isoform_132523_9	chr4	+	4381	21	NIC	ENSMUSG00000028830.15	novel	4073	24	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	14.5995719115322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGGCTATGAGGTTGT	NA	False	NA	17	True	ATTAAA	-17	NA	126647336	126748128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126647561_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
Isoform_132524_8	chr4	+	4193	21	NIC	ENSMUSG00000028830.15	novel	4384	21	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.138031576133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGCTATGAGGTTG	NA	False	NA	16	True	ATTAAA	-16	NA	126647601	126748127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126647639_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
Isoform_132526_109	chr4	+	4356	21	FSM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	28	0	4	0	multi-exon	FALSE	canonical	2	36	junction_1	9.66643677887566	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647590	126748129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
Isoform_132532_1125	chr4	+	3026	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-2	441	-2	-441	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTTCATGTATTACTT	NA	False	NA	16	True	ATTAAA	-16	NA	126915114	126924588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
Isoform_132535_33	chr4	+	3060	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-37	442	-37	-442	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTTTCATGTATTACT	NA	False	NA	15	True	ATTAAA	-15	NA	126915079	126924587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
Isoform_132537_85	chr4	+	3459	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	2	4	2	-4	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCTTGATTTCTTCCCA	NA	False	NA	22	True	AATAAA	-18	NA	126915118	126925025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
Isoform_132560_148	chr4	+	2263	12	NIC	ENSMUSG00000028820.14	novel	925	10	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	77	junction_9	288.88503246702	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTCTTTGTTCAA	NA	False	NA	12	True	AATAAA	-13	NA	126915118	126930800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
Isoform_132587_5	chr4	+	376	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	194	4	-37	-4	multi-exon	FALSE	canonical	3	313	junction_2	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTCTTTGTTCAAGT	NA	False	NA	14	True	AATAAA	-15	NA	126929436	126930802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126929648_126930355_126930443_126930724
Isoform_132591_4	chr4	+	3062	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	-2494	6	-775	-6	multi-exon	FALSE	canonical	3	313	junction_2	16	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTCTTTGTTCAA	NA	False	NA	12	True	AATAAA	-13	NA	126926748	126930800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126929648_126930355_126930443_126930724
Isoform_132593_4	chr4	+	2330	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	-1762	6	-43	-6	multi-exon	FALSE	canonical	3	313	junction_2	16	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTCTTTGTTCAA	NA	False	NA	12	True	AATAAA	-13	NA	126927480	126930800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126929648_126930355_126930443_126930724
Isoform_132600_12	chr4	+	4201	15	FSM	ENSMUSG00000042408.14	ENSMUST00000046751.13	4210	15	13	-4	-1	2	multi-exon	FALSE	canonical	2	12	junction_1	19.4952898550038	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATGTTGGTGATTGT	2757	False	NA	21	True	NA	NA	NA	126971188	127018167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_126971394_126972200_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
Isoform_132602_21	chr4	+	4995	14	NIC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-1	-9	intron_retention	FALSE	canonical	3	69	junction_3	8.41103811251486	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGAAAATGTAGCCTTTA	2757	False	NA	8	True	NA	NA	NA	126971188	127018154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
Isoform_132604_35	chr4	+	4929	14	NIC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-1	-75	intron_retention	FALSE	canonical	3	69	junction_3	8.41103811251486	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTACAGGGATTTA	2757	False	NA	-58	True	ATTAAA	-17	NA	126971188	127018088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
Isoform_132605_15	chr4	+	4952	14	NIC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-11	-76	intron_retention	TRUE	canonical	3	69	junction_3	8.41103811251486	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGTACAGGGATTT	2733	False	NA	-59	True	ATTAAA	-16	NA	126971164	127018087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
Isoform_132608_5	chr4	+	1981	2	ISM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	-6	-1	-6	1	intron_retention	FALSE	canonical	3	105	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTACTTCGTCCACTT	NA	False	NA	8	True	TTTAAA	-5	NA	127019832	127023438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_127019987_127021611
Isoform_132609_111	chr4	+	1126	3	FSM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	-6	0	-6	0	multi-exon	FALSE	canonical	3	98	junction_2	3.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019832	127023437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_127019987_127021611_127021793_127022646
Isoform_132611_3	chr4	+	1654	3	ISM	ENSMUSG00000042388.15	ENSMUST00000046659.14	3884	12	-19	41071	-19	-18803	5prime_fragment	FALSE	canonical	3	99	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGCTGACCTCTGT	NA	False	NA	NA	False	NA	NA	NA	127062977	127089744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_127063159_127086867_127086951_127088354
Isoform_132612_157	chr4	+	3906	12	NNC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	54.1100806361096	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAATCTCTCCAGAAGA	NA	False	NA	16	True	AATAAA	-19	NA	127062973	127130814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_127063159_127086867_127086951_127088354_127089502_127093460_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
Isoform_132613_23	chr4	+	3986	12	FSM	ENSMUSG00000042388.15	ENSMUST00000046659.14	3884	12	-102	0	-102	0	multi-exon	TRUE	canonical	3	99	junction_1	32.2174943493246	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATCTCTCCAGAAGAG	NA	False	NA	17	True	AATAAA	-20	NA	127062894	127130815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_127063159_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
Isoform_132615_10	chr4	+	3897	12	NIC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	47.2956238256549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATCTCTCCAGAAGAG	NA	False	NA	17	True	AATAAA	-20	NA	127062950	127130815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_127063159_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129210_127129322_127129942
Isoform_132626_5	chr4	+	3208	9	ISM	ENSMUSG00000042388.15	ENSMUST00000106094.9	4207	12	26067	5	4334	-5	3prime_fragment	FALSE	canonical	3	155	junction_4	13.1600721882519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAGCCAAATCTCTCCAG	NA	False	NA	12	True	AATAAA	-15	NA	127092739	127130810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
Isoform_132632_13	chr4	+	2398	8	ISM	ENSMUSG00000042388.15	ENSMUST00000106094.9	4207	12	27262	5	-3164	-5	3prime_fragment	FALSE	canonical	3	155	junction_3	14.059639731791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAGCCAAATCTCTCCAG	NA	False	NA	12	True	AATAAA	-15	NA	127093934	127130810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
Isoform_132636_363	chr4	+	993	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	29	0	29	0	multi-exon	FALSE	canonical	3	445	junction_1	0	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGAGTCCTGCTCTCT	NA	False	NA	29	True	ATTAAA	-18	NA	127137605	127141602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_127137692_127140695
Isoform_132640_28	chr4	+	1943	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	37	-958	37	958	multi-exon	FALSE	canonical	3	445	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCGGCTCCAGACTGTGT	NA	False	NA	NA	False	NA	NA	NA	127137613	127142560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_127137692_127140695
Isoform_132641_7	chr4	+	1976	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	4	-958	4	958	multi-exon	FALSE	canonical	3	445	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCGGCTCCAGACTGTGT	NA	False	NA	NA	False	NA	NA	NA	127137580	127142560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_127137692_127140695
Isoform_132643_12	chr4	+	3928	15	FSM	ENSMUSG00000028796.18	ENSMUST00000030588.13	3949	15	14	7	14	-7	multi-exon	FALSE	canonical	1	2	junction_6	86.1216806475061	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128548508	128646667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_128548610_128598790_128599028_128601729_128601889_128602769_128602848_128603291_128603457_128604850_128604938_128605851_128606153_128616701_128617094_128617340_128617507_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
Isoform_132644_10	chr4	+	2688	8	NIC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	9	-7	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	83.6650269508943	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128621386	128646667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_128621664_128635708_128635878_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
Isoform_132645_55	chr4	+	2444	7	NIC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	-7	-7	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	50.0513625078168	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128621366	128646667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_128621664_128637146_128637255_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
Isoform_132647_232	chr4	+	2501	7	FSM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	27	7	27	-7	multi-exon	FALSE	canonical	3	155	junction_1	20.8865985742054	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128621404	128646667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
Isoform_13265_381	chr11	-	3723	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-510	combination_of_known_junctions	FALSE	canonical	3	238	junction_18	63.0911793643156	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5287	False	NA	-6	True	ATTAAA	-17	NA	60101247	60090424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
Isoform_132650_20	chr4	+	3771	5	FSM	ENSMUSG00000041000.9	ENSMUST00000035667.9	3752	5	-22	3	-14	-3	multi-exon	TRUE	canonical	1	1	junction_4	1.78535710713571	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGTGTACGTTCCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	128777358	128805118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_128778371_128790612_128790709_128794338_128794596_128796265_128796382_128802828
Isoform_132657_3250	chr4	+	1701	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	80	0	-49	0	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	3250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2949	False	NA	29	True	AATAAA	-19	NA	128887096	128905322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
Isoform_132659_276	chr4	+	1781	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2869	False	NA	29	True	AATAAA	-19	NA	128887016	128905322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
Isoform_13267_454	chr11	-	3787	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	2	510	2	-510	multi-exon	FALSE	canonical	3	238	junction_18	63.0911793643156	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3803	False	NA	-6	True	ATTAAA	-17	NA	60111428	60090424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
Isoform_132674_16	chr4	+	2711	9	FSM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	-719	0	-176	0	multi-exon	FALSE	canonical	3	28	junction_2	45.8214946831724	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	False	NA	16	True	AATAAA	-19	NA	128951887	128978319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
Isoform_132675_251	chr4	+	2656	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	-124	0	-124	0	multi-exon	FALSE	canonical	3	132	junction_2	17.2005632175228	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	False	NA	16	True	AATAAA	-19	NA	128951939	128978319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
Isoform_13268_35	chr11	-	4288	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	2	9	2	-9	multi-exon	FALSE	canonical	3	238	junction_18	63.0911793643156	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCTCGATACACACAAT	3803	False	NA	NA	False	AATAAA	-12	NA	60111428	60089923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
Isoform_132685_3239	chr4	+	2366	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	172	371	30	-371	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	3239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	885	False	NA	25	True	AATAAA	-15	NA	129083724	129113029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
Isoform_132688_230	chr4	+	2463	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	75	371	-67	-371	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	788	False	NA	25	True	AATAAA	-15	NA	129083627	129113029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
Isoform_13269_29	chr11	-	3875	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-180	-511	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	97.6774106086452	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCAGTTTTGTTTATC	1644	False	NA	-7	True	ATTAAA	-16	NA	60113587	60090425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
Isoform_132722_5	chr4	+	2810	4	ISM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	5492	-822	5478	822	3prime_fragment	FALSE	canonical	2	3	junction_3	3.2659863237109	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATTGGTCTATTATGTT	NA	False	NA	NA	False	AGTAAA	-17	NA	129186901	129203174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_129188170_129200134_129200260_129200420_129200498_129201834
Isoform_132723_3	chr4	+	2718	3	NIC	ENSMUSG00000001333.10	novel	2042	5	NA	NA	5494	823	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	3	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGGTCTATTATGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	129186917	129203175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_129188170_129200134_129200260_129201834
Isoform_132724_4	chr4	+	2384	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	322	1127	5	-1127	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTGCGGTTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	129229809	129242537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_132725_25	chr4	+	768	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	277	2788	-40	50	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTTGTACTTGGTCAT	NA	False	NA	67	True	AATGAA	-19	NA	129229764	129240876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_132726_152	chr4	+	680	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	312	2841	-5	-3	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGTGTGTAGCAGTGG	NA	False	NA	14	True	TTTAAA	-21	NA	129229799	129240823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_132727_59	chr4	+	1073	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	-87	2847	-87	-9	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAAACCAGTGTGTAG	NA	False	NA	8	True	TTTAAA	-15	NA	129229400	129240817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_132728_82	chr4	+	711	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	275	2847	-42	-9	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAAACCAGTGTGTAG	NA	False	NA	8	True	TTTAAA	-15	NA	129229762	129240817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_13273_75	chr11	-	3709	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-509	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTTTATCTG	5287	False	NA	-5	True	ATTAAA	-18	NA	60101247	60090423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
Isoform_132730_4	chr4	+	800	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	311	2722	-6	116	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGCCATTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	129229798	129240942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_132731_16	chr4	+	1125	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	-81	2789	-81	49	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTCTTGTACTTGGTCA	NA	False	NA	66	True	AATGAA	-18	NA	129229406	129240875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_132732_30	chr4	+	733	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	312	2788	-5	50	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTTGTACTTGGTCAT	NA	False	NA	67	True	AATGAA	-19	NA	129229799	129240876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_132733_4	chr4	+	2252	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	331	1250	14	-1250	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCCTGAAATTTCATTT	NA	False	NA	NA	False	NA	NA	NA	129229818	129242414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_132734_5	chr4	+	709	6	FSM	ENSMUSG00000057572.16	ENSMUST00000106047.4	618	6	-95	4	-60	-4	multi-exon	FALSE	canonical	3	22	junction_1	246.415421595321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGTGTGTAGCAGTG	NA	False	NA	13	True	TTTAAA	-20	NA	129229744	129240822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129229933_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_132735_242	chr4	+	2688	12	NNC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.0511574074013	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCGGAAGTGTCCGGGGA	NA	False	NA	61	True	ATTAAA	-12	NA	129355476	129382288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833_129381320_129381348
Isoform_132737_56	chr4	+	2729	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	91	3	0	-3	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCGGAAGTGTCCGGGGA	NA	False	NA	61	True	ATTAAA	-12	NA	129355464	129382288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
Isoform_132740_11	chr4	+	2626	11	NIC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	36.7662889070953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCGGAAGTGTCCGGGGA	NA	False	NA	61	True	ATTAAA	-12	NA	129355476	129382288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360706_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
Isoform_132747_11190	chr4	+	1544	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	51	10	51	-10	multi-exon	FALSE	canonical	3	8029	junction_1	0	11190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTCATTGAGTGGT	NA	False	NA	14	True	AATAAA	-14	NA	129407424	129409768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129407710_129408509
Isoform_13275_63	chr11	-	3772	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	2	-510	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3803	False	NA	-6	True	ATTAAA	-17	NA	60111428	60090424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60111278
Isoform_132754_19	chr4	+	1622	6	NIC	ENSMUSG00000028797.21	novel	769	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	295.098220936691	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3203	False	NA	9	True	AATAAA	-9	NA	129494499	129502314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_129494525_129494775_129494928_129495199_129495419_129495987_129496055_129500879_129500973_129501248
Isoform_132757_9	chr4	+	2192	5	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	74	junction_2	271.708023436924	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGCTTAGCAAATGTT	3203	False	NA	10	True	AATAAA	-10	NA	129494499	129502315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_129494525_129494775_129494928_129495199_129496055_129500879_129500973_129501248
Isoform_132759_160	chr4	+	1403	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	27	7	0	0	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3203	False	NA	9	True	AATAAA	-9	NA	129494499	129502314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
Isoform_132771_192	chr4	+	1513	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	7	-1	0	1	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGCTTAGCAAATGTT	3203	False	NA	10	True	AATAAA	-10	NA	129494499	129502315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
Isoform_132786_348	chr4	+	3657	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129714002	129743771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
Isoform_132788_33	chr4	+	3679	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-33	0	-33	0	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129713980	129743771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
Isoform_132804_16	chr4	+	3337	6	FSM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	20	25	7	0	multi-exon	FALSE	canonical	3	11	junction_1	1089.03101884198	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129714520	129743771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129714593_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
Isoform_132817_3	chr4	+	4981	28	FSM	ENSMUSG00000028782.15	ENSMUST00000120204.8	5170	28	189	0	-105	0	multi-exon	TRUE	canonical	2	10	junction_2	6.85835527200487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	NA	False	NA	9	True	AATAAA	-15	NA	129878851	129916426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
Isoform_132818_5	chr4	+	3931	26	ISM	ENSMUSG00000028782.15	ENSMUST00000106015.9	4982	29	14672	2	-3136	-2	3prime_fragment	FALSE	canonical	2	2	junction_18	8.10293773886977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGCTGCCCGGATTGT	1487	False	NA	7	True	AATAAA	-13	NA	129900532	129916424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129908727_129908827_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
Isoform_132819_19	chr4	+	3833	25	NIC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-3135	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_14	5.46055934253382	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	1488	False	NA	9	True	AATAAA	-15	NA	129900533	129916426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
Isoform_132823_383	chr4	+	1490	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	62	-1	62	0	multi-exon	FALSE	canonical	3	185	junction_1	25.1047804212664	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCTTGACTGTGTGTC	9340	False	NA	26	True	AATAAA	-33	NA	130001410	130021928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
Isoform_132829_2183	chr4	+	676	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	143	4	143	-4	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTCTGTCTTTGGT	NA	False	NA	27	True	AATAAA	-16	NA	130202530	130209252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
Isoform_132830_96	chr4	+	712	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	111	0	111	0	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202498	130209256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
Isoform_13284_81	chr11	-	4976	15	FSM	ENSMUSG00000000538.19	ENSMUST00000102683.11	4999	15	23	0	23	0	multi-exon	FALSE	canonical	3	31	junction_8	7.39553091745416	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243708	60117540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
Isoform_132841_1342	chr4	+	1555	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	32	-3	-30	3	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	1342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTGTGACTTGGATT	NA	False	NA	25	True	ATTAAA	-26	NA	130253956	130283822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
Isoform_13285_3	chr11	-	4885	14	NIC	ENSMUSG00000000538.19	novel	4999	15	NA	NA	27	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	13.4194947832132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTGTGTGATGTCT	NA	False	NA	-3	True	AATAAA	-12	NA	60243704	60117542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60243582
Isoform_132853_25	chr4	+	2718	7	FSM	ENSMUSG00000078532.10	ENSMUST00000180884.8	1028	7	-221	-1469	-14	1469	multi-exon	TRUE	canonical	3	9	junction_3	30.3790863735052	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTGTCTTGCCCTCTT	NA	False	NA	17	True	ATTAAA	-23	NA	130297182	130341113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337183_130337399_130338581_130338643_130339094_130339177_130339331
Isoform_132857_223	chr4	+	2686	7	FSM	ENSMUSG00000078532.10	ENSMUST00000105993.4	1202	7	-2	-1482	-2	1466	multi-exon	FALSE	canonical	3	69	junction_2	13.2748718344933	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTATCTGTCTTGCCCT	NA	False	NA	14	True	ATTAAA	-20	NA	130297194	130341110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331
Isoform_13286_7	chr11	-	2156	13	FSM	ENSMUSG00000000538.19	ENSMUST00000064019.15	2151	13	-2	-3	-2	3	multi-exon	FALSE	canonical	1	2	junction_1	13.4935684268057	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGTCATGTGTGTATCT	NA	False	NA	NA	False	AATAAA	-16	NA	60243733	60131392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60132172_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
Isoform_13287_3	chr11	-	3513	12	FSM	ENSMUSG00000000538.19	ENSMUST00000102682.5	2256	12	22	-1279	22	912	multi-exon	FALSE	canonical	3	31	junction_5	7.4022556312081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGGAAGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	60243709	60130483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
Isoform_132870_88	chr4	+	5332	22	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_8	114.255134797804	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132875_71	chr4	+	5341	22	FSM	ENSMUSG00000028580.16	ENSMUST00000030315.13	5389	22	47	1	1	1	multi-exon	FALSE	canonical	3	218	junction_8	122.217214904643	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390678	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132879_14	chr4	+	5097	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	153.602115870843	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390680	130508875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_13288_6	chr11	-	1468	9	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-5	-401	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	136.995209770269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGCCTCATTTTTATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	60307882	60291864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307576
Isoform_132880_15	chr4	+	5107	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	159.256546176288	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390674	130508873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132881_139	chr4	+	5332	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	-18	-1297	1	1	multi-exon	FALSE	canonical	3	368	junction_8	95.9617506945964	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390678	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132888_119	chr4	+	5338	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097862.3	3991	22	-38	-1309	1	1	multi-exon	FALSE	canonical	3	304	junction_17	105.62885866236	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390678	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_13289_5	chr11	-	1872	9	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	136.995209770269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307885	60291463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307576
Isoform_132891_22	chr4	+	5092	21	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	140.971131796549	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132893_18	chr4	+	5101	21	NIC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	147.35890709421	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390678	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_13290_11	chr11	-	1612	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	131.387249666777	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307860	60291463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
Isoform_132904_26	chr4	+	5041	20	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	146.707861670397	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_13291_5	chr11	-	1230	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	-7	-406	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	131.387249666777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATCAAGCCTCATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	60307884	60291869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
Isoform_132910_13	chr4	+	4654	18	NIC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	53	junction_3	170.362203193128	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390632	130508873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132915_16	chr4	+	4606	18	FSM	ENSMUSG00000028580.16	ENSMUST00000105991.9	4614	18	9	-1	1	1	multi-exon	FALSE	canonical	3	53	junction_3	156.174288231124	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390678	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132917_21	chr4	+	4610	18	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	163.478197651144	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390680	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_13292_220	chr11	-	1787	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	14	12	-1	0	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307863	60291463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
Isoform_132920_11	chr4	+	5332	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	144.41451111439	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390678	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132922_15	chr4	+	5336	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	150.339585371602	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390679	130508873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132925_14	chr4	+	5327	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	131.228263506217	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390680	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132927_15	chr4	+	5333	22	NNC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	137.961166444446	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390680	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132928_11	chr4	+	5237	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	139.363681881846	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390681	130508874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132931_23	chr4	+	5234	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	126.002609482391	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_132952_5	chr4	+	1401	2	FSM	ENSMUSG00000025743.15	ENSMUST00000146093.2	528	2	-178	-695	-11	695	multi-exon	FALSE	canonical	3	62	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	130519836	130545279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130520114_130544155
Isoform_132954_84	chr4	+	4898	5	FSM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	72	3	72	-3	multi-exon	FALSE	canonical	3	49	junction_4	11.1018016555873	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGTGTGGTGGCCCACGT	NA	False	NA	7	True	AATAAA	-15	NA	130519919	130553627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678_130548968_130549953
Isoform_132955_72	chr4	+	4982	5	FSM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	-10	1	-10	-1	multi-exon	FALSE	canonical	3	49	junction_4	11.1018016555873	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTGGTGGCCCACGTGT	NA	False	NA	9	True	AATAAA	-17	NA	130519837	130553629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678_130548968_130549953
Isoform_132959_498	chr4	+	2595	8	FSM	ENSMUSG00000028581.18	ENSMUST00000151698.8	2600	8	3	2	3	-2	multi-exon	FALSE	canonical	3	425	junction_4	26.2071808199702	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640438	130663450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
Isoform_13296_12	chr11	-	1564	8	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	105.029830553622	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTGAATCTTTGG	NA	False	NA	-11	True	NA	NA	NA	60307874	60291462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307811
Isoform_132960_24	chr4	+	2816	8	FSM	ENSMUSG00000028581.18	ENSMUST00000151698.8	2600	8	-218	2	-218	-2	multi-exon	FALSE	canonical	3	425	junction_4	26.2071808199702	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640217	130663450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
Isoform_132961_181	chr4	+	2372	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	159.179487921654	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640626	130663450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662685_130662719
Isoform_132968_24	chr4	+	2570	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-9	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640426	130663450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662433_130662469
Isoform_132974_9	chr4	+	2044	8	NNC	ENSMUSG00000040533.8	novel	2001	8	NA	NA	-61	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5.36808406515884	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCGCTGTACACCCTGGA	1430	False	NA	NA	False	AATAAA	-14	NA	130671634	130682768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130671841_130673139_130673487_130677245_130677469_130678599_130678726_130679149_130679567_130680143_130680297_130681646_130681727_130682276
Isoform_132975_11	chr4	+	1994	8	NNC	ENSMUSG00000040533.8	novel	2001	8	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5.36808406515884	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGATGGAATTAGTGGT	1493	False	NA	NA	False	AATAAA	-27	NA	130671697	130682781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130671841_130673139_130673487_130677245_130677469_130678599_130678726_130679149_130679567_130680143_130680297_130681646_130681727_130682276
Isoform_132976_6	chr4	+	1350	11	NIC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	55.4697214703662	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATGCGTGTGGAGGAAT	NA	False	NA	34	True	AATAAA	-34	NA	131570824	131595098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131588487_131588544_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
Isoform_132977_218	chr4	+	1319	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	18	0	-5	0	multi-exon	FALSE	canonical	3	105	junction_6	17.6243378301319	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGCGTGTGGAGGAA	NA	False	NA	33	True	AATAAA	-33	NA	131570798	131595097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
Isoform_132978_9	chr4	+	2246	9	NIC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	105	junction_5	17.0861786248418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCATGCGTGTGGAGGA	NA	False	NA	32	True	AATAAA	-32	NA	131570782	131595096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
Isoform_132981_70	chr4	+	2837	9	NIC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	-18	-3	combination_of_known_junctions	FALSE	canonical	3	56	junction_3	167.217625790465	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCACCGCGCTTGAAT	NA	False	NA	19	True	AATAAA	-19	NA	131600909	131629014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
Isoform_132986_15	chr4	+	2729	9	NNC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	41	-5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	173.501035659733	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATTTCACCGCGCTTGA	NA	False	NA	17	True	AATAAA	-17	NA	131600968	131629012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_131601182_131611586_131611794_131612666_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
Isoform_132990_130	chr4	+	2323	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	-69	3	-69	-3	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCACCGCGCTTGAAT	NA	False	NA	19	True	AATAAA	-19	NA	131600858	131629014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
Isoform_132991_924	chr4	+	2212	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	42	3	42	-3	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCACCGCGCTTGAAT	NA	False	NA	19	True	AATAAA	-19	NA	131600969	131629014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
Isoform_13300_6	chr11	-	1237	7	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	1	-408	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	118.191464252806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATATCAAGCCTCATT	NA	False	NA	NA	False	ATTAAA	-16	NA	60307867	60291871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300411_60300457_60307576
Isoform_133001_109	chr4	+	1348	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	1	2438	1	616	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTAGTGTCCATAGGACC	NA	False	NA	25	True	AATAAA	-21	NA	132001686	132020639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
Isoform_133005_9	chr4	+	2540	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	42	1205	1	-1205	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTGTGTGGCTTCAT	NA	False	NA	NA	False	AATAAA	-27	NA	132001727	132021872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
Isoform_133009_6	chr4	+	2579	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	4	1204	4	-1204	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTGTGTGGCTTCATT	NA	False	NA	NA	False	AATAAA	-28	NA	132001689	132021873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
Isoform_133011_4	chr4	+	3757	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	34	-4	-4	4	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGGTGGAATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	132001719	132023081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
Isoform_133012_71	chr4	+	608	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	-2	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	27.427176303805	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035986	132038335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
Isoform_133014_5	chr4	+	841	4	FSM	ENSMUSG00000086290.10	ENSMUST00000232260.2	896	4	53	2	0	0	multi-exon	FALSE	canonical	3	139	junction_1	29.9369708257569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTTTTTTATTTATT	NA	False	NA	25	True	AATAAA	-14	NA	132035986	132038333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132036219_132037148_132037215_132037461_132037816_132038144
Isoform_133025_2450	chr4	+	1382	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	12	7	-5	-7	multi-exon	TRUE	canonical	3	2684	junction_8	233.065676097962	2450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	2343	False	NA	12	True	AATAAA	-12	NA	132262872	132281046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
Isoform_13303_5	chr11	-	1884	9	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	150.736473273724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTGAATCTTT	NA	False	NA	-13	True	NA	NA	NA	60307877	60291464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307576
Isoform_13304_16	chr11	-	1648	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	146.351460532514	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTGAATCTTTGG	NA	False	NA	-11	True	NA	NA	NA	60307874	60291462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
Isoform_133045_146	chr4	+	2515	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	15	2630	3	0	multi-exon	FALSE	canonical	3	62	junction_15	5.48542101848163	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	28	True	NA	NA	NA	132366371	132449446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
Isoform_133048_1670	chr4	+	1521	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	22	270	-19	-270	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTTCTGAAATGTTGGT	NA	False	NA	25	True	GATAAA	-15	NA	132495667	132505793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
Isoform_133049_28	chr4	+	1789	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	20	4	20	-4	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCGCCCCTGGCCG	NA	False	NA	3	True	AGTAAA	-20	NA	132495665	132506059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
Isoform_13305_5	chr11	-	1272	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	20	-406	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	146.351460532514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATCAAGCCTCATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	60307905	60291869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
Isoform_133059_3	chr4	+	6327	6	FSM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	-22	-407	-22	4	multi-exon	FALSE	canonical	3	23	junction_2	36.5217743271052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTTGTG	NA	False	NA	NA	False	NA	NA	NA	132766781	132804960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132767098_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
Isoform_13306_21	chr11	-	1807	8	FSM	ENSMUSG00000042709.16	ENSMUST00000145532.9	949	8	-18	-840	0	0	multi-exon	FALSE	canonical	3	57	junction_4	104.174892192242	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307862	60291463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307576
Isoform_133061_6	chr4	+	5911	5	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-25	4850	intron_retention	FALSE	canonical	3	39	junction_1	10.2072278312968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAGAAAACCTGAG	NA	False	NA	NA	False	NA	NA	NA	132766778	132793937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_132767098_132782323_132782515_132788091_132788204_132788337_132788376_132788686
Isoform_133066_3	chr4	+	6332	6	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-119	17	intron_retention	FALSE	canonical	3	39	junction_1	32.2204903749152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTCTTGTAAAACTG	NA	False	NA	NA	False	NA	NA	NA	132766684	132804973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_132767098_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
Isoform_133073_6	chr4	+	3459	2	ISM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	23989	-407	-2767	4	3prime_fragment	FALSE	canonical	3	130	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTTGTG	NA	False	NA	NA	False	NA	NA	NA	132790792	132804960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_132793589_132804297
Isoform_133078_12	chr4	+	5598	9	NIC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	151.493347626224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGGTGTCTGTGTGTG	NA	False	NA	43	True	GATAAA	-21	NA	132857853	132927066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_132858035_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
Isoform_13308_13	chr11	-	1589	8	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	134.352870745478	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307879	60291463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307811
Isoform_133085_314	chr4	+	5600	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	38	4	3	-4	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACCTTTGGTGTCTGTGT	NA	False	NA	40	True	GATAAA	-18	NA	132857853	132927063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
Isoform_133094_33	chr4	+	892	6	FSM	ENSMUSG00000028865.15	ENSMUST00000105910.2	986	6	91	3	91	-3	multi-exon	FALSE	canonical	3	29	junction_1	9.2736184954957	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTGACCTATGTCTT	NA	False	NA	17	True	AATAAA	-19	NA	132948211	132951863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132948379_132948753_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
Isoform_133095_9	chr4	+	1283	5	NIC	ENSMUSG00000028865.15	novel	986	6	NA	NA	75	-3	intron_retention	FALSE	canonical	3	38	junction_4	6.80073525436772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTGACCTATGTCTT	NA	False	NA	17	True	AATAAA	-19	NA	132948195	132951863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
Isoform_133096_30	chr4	+	4339	29	FSM	ENSMUSG00000028862.7	ENSMUST00000030677.7	4334	29	-5	0	-5	0	multi-exon	TRUE	canonical	2	4	junction_2	5.06727697273075	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTTGGCAACTTCA	8444	False	NA	18	True	ATTAAA	-18	NA	132968123	132980240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_132968743_132970128_132970269_132970363_132970388_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
Isoform_133098_95	chr4	+	4650	12	FSM	ENSMUSG00000028854.10	ENSMUST00000030669.8	4676	12	23	3	23	-3	multi-exon	FALSE	canonical	3	38	junction_3	11.7922793063796	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCCAGGGCTGCTTCCT	180	False	NA	19	True	AATAAA	-20	NA	133097039	133151010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
Isoform_133106_76	chr4	+	2285	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	2	0	2	0	multi-exon	TRUE	canonical	3	34	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAACTGTATCTTTCTCCT	NA	False	NA	13	True	AATAAA	-17	NA	133207444	133215249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_133207875_133213394
Isoform_133108_5	chr4	+	2299	3	NIC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	-10	1	intron_retention	FALSE	canonical	3	30	junction_1	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGCCTGGTCATCAG	5490	False	NA	7	True	NA	NA	NA	133246292	133258099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_133246364_133255050_133256321_133257141
Isoform_133109_25	chr4	+	1937	4	NIC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	23.3666428910958	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGCCTGGTCATCAG	5471	False	NA	7	True	NA	NA	NA	133246273	133258099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_133246364_133255050_133256321_133257141_133257217_133257597
Isoform_13311_8	chr11	-	3684	7	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	57	junction_4	110.501005525842	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307871	60291463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60300232_60300411_60300457_60307576
Isoform_133110_46	chr4	+	1877	4	NIC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	23.3666428910958	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACACCTGCCTGGTCATC	5529	False	NA	5	True	NA	NA	NA	133246331	133258097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_133246364_133255050_133256321_133257141_133257217_133257597
Isoform_133111_7	chr4	+	1677	4	FSM	ENSMUSG00000037600.17	ENSMUST00000042919.16	1708	4	32	-1	1	1	multi-exon	FALSE	canonical	2	6	junction_1	34.6698716467194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCTGGTCATCAGTTA	5532	False	NA	10	True	NA	NA	NA	133246334	133258102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_133246364_133255252_133256321_133257141_133257217_133257597
Isoform_133112_55	chr4	+	1893	4	NIC	ENSMUSG00000037600.17	novel	1699	4	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	21.9544984001001	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGCCTGGTCATCAG	5574	False	NA	7	True	NA	NA	NA	133246376	133258099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_133246423_133255050_133256321_133257141_133257217_133257597
Isoform_133116_119	chr4	+	2004	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	-4	4	-4	-4	multi-exon	FALSE	canonical	3	33	junction_3	9.82626864865578	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATCTGCCTTAGTGAA	NA	False	NA	9	True	AATAAA	-16	NA	133302051	133311550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
Isoform_133118_20	chr4	+	3490	11	Fusion	ENSMUSG00000028850.3_ENSMUSG00000028848.14	novel	2004	7	NA	NA	-4	-3	multi-exon	FALSE	canonical	3	33	junction_3	55.2959311342164	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACGTTTTTTTAGTGTG	NA	False	NA	38	True	NA	NA	NA	133302051	133319043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
Isoform_133119_12	chr4	+	1292	5	FSM	ENSMUSG00000028848.14	ENSMUST00000105899.2	996	5	-55	-241	2	-4	multi-exon	FALSE	canonical	3	9	junction_1	62.5154980784765	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACGTTTTTTTAGTGT	NA	False	NA	37	True	NA	NA	NA	133311674	133319042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_133312112_133313220_133313378_133315810_133315972_133317077_133317209_133318636
Isoform_133121_225	chr4	+	1354	5	FSM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	10	3	10	-3	multi-exon	FALSE	canonical	3	134	junction_3	14.7394029729837	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACGTTTTTTTAGTGTG	NA	False	NA	38	True	NA	NA	NA	133311682	133319043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
Isoform_133123_3	chr4	+	1323	5	NNC	ENSMUSG00000028848.14	novel	1367	5	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	76.0604200619481	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACGTTTTTTTAGTGTG	NA	False	NA	38	True	NA	NA	NA	133311684	133319043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_133312181_133313220_133313378_133315810_133315972_133317218_133317321_133318636
Isoform_133125_3	chr4	+	4758	20	ISM	ENSMUSG00000012123.18	ENSMUST00000227683.2	5578	22	5056	2	-41	1	3prime_fragment	FALSE	canonical	2	6	junction_1	45.3144140631175	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	15	True	NA	NA	NA	133793181	133819813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_133793266_133799740_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_133126_15	chr4	+	2446	19	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	6204	4	-4182	-1	3prime_fragment	FALSE	canonical	3	14	junction_1	44.6930891998105	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGCTGGTGGTCTCGT	NA	False	NA	13	True	NA	NA	NA	133801966	133819811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_133127_43	chr4	+	1973	15	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	10292	0	-94	0	3prime_fragment	FALSE	canonical	3	24	junction_2	42.4615071781106	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGTGGTCTCGTCTCT	NA	False	NA	17	True	NA	NA	NA	133806054	133819815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_133128_79	chr4	+	1152	8	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13854	2	-6	1	3prime_fragment	FALSE	canonical	3	103	junction_1	10.7532624380336	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	15	True	NA	NA	NA	133809616	133819813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_133129_3	chr4	+	1275	8	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13731	2	-129	1	3prime_fragment	FALSE	canonical	3	103	junction_1	10.7532624380336	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	15	True	NA	NA	NA	133809493	133819813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_133130_7	chr4	+	1020	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	40.2478432824529	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGCTGGTGGTCTCGT	NA	False	NA	13	True	NA	NA	NA	133809616	133819811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_133809759_133809885_133809999_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_133131_28	chr4	+	1040	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	39.282806530197	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	15	True	NA	NA	NA	133809615	133819813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_133809759_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_133133_41	chr4	+	1561	15	FSM	ENSMUSG00000012126.17	ENSMUST00000074690.11	1573	15	11	1	-9	0	multi-exon	FALSE	canonical	3	35	junction_2	24.8785827078437	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGCTTCACAAGGCTCT	NA	False	NA	14	True	AATAAA	-14	NA	133829904	133854086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
Isoform_133134_8	chr4	+	2475	14	NIC	ENSMUSG00000012126.17	novel	1419	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	35	junction_2	25.7307404852087	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGCTTCACAAGGCTCT	NA	False	NA	14	True	AATAAA	-14	NA	133829904	133854086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
Isoform_133136_6	chr4	+	2713	13	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	10	0	intron_retention	TRUE	canonical	3	35	junction_2	26.1709126066835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133829903	133854085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
Isoform_133137_3	chr4	+	1559	15	NNC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.6379514012913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGCTTCACAAGGCTCT	NA	False	NA	14	True	AATAAA	-14	NA	133829904	133854086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_133829960_133835562_133835667_133836403_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
Isoform_133140_35	chr4	+	2169	9	FSM	ENSMUSG00000028834.14	ENSMUST00000105875.8	1886	9	-281	-2	-281	2	multi-exon	FALSE	canonical	1	4	junction_7	6.8545149354276	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATGAAAGAAGTGTGATT	NA	False	NA	NA	False	AATAAA	-30	NA	134042149	134056942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134042694_134043697_134043871_134046942_134047112_134048493_134048590_134050314_134050549_134052355_134052379_134052894_134053020_134055015_134055094_134056215
Isoform_133142_208	chr4	+	3208	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-57	2	-32	-2	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTTGCCTTGCA	2024	False	NA	14	True	AATAAA	-19	NA	134070459	134081793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
Isoform_133143_296	chr4	+	3152	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	1	0	1	0	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGCCTTGCAGA	2082	False	NA	16	True	AATAAA	-21	NA	134070517	134081795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
Isoform_133160_44	chr4	+	3125	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	189	-1291	189	0	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGAGTGTTTTGCC	2773	False	NA	9	True	AATAAA	-14	NA	134071208	134081788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
Isoform_133168_71	chr4	+	3086	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	80	-918	-7	-3	multi-exon	FALSE	canonical	3	35	junction_4	4.79687398208458	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGCTGGCTGGCTTTCT	1859	False	NA	17	True	ATTAAA	-19	NA	134123710	134154721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
Isoform_133170_4	chr4	+	2990	10	NIC	ENSMUSG00000037366.15	novel	2248	11	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	13.8171480504087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGCTGGCTGGCTTTCTT	1859	False	NA	18	True	ATTAAA	-20	NA	134123710	134154722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_134123736_134130280_134130416_134131403_134131555_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
Isoform_133171_4	chr4	+	2861	9	NIC	ENSMUSG00000037366.15	novel	2248	11	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	11.6270159542335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCGCTGGCTGGCT	1832	False	NA	13	True	ATTAAA	-15	NA	134123683	134154717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_134123736_134130280_134130416_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
Isoform_133173_4	chr4	+	980	5	FSM	ENSMUSG00000028832.12	ENSMUST00000105867.8	802	5	-10	-168	0	-11	multi-exon	FALSE	canonical	1	1	junction_4	432.634011030108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGACTTCTTTCT	NA	False	NA	0	True	AATAAA	-16	NA	134195709	134201143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200632
Isoform_133174_150	chr4	+	1002	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	54	4	-25	-4	multi-exon	FALSE	canonical	3	455	junction_1	251.409029273016	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTTTCTGTTCAGG	NA	False	NA	7	True	AATAAA	-23	NA	134195684	134201150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
Isoform_133176_14	chr4	+	1050	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	6	4	6	-4	multi-exon	FALSE	canonical	3	455	junction_1	251.409029273016	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTTTCTGTTCAGG	NA	False	NA	7	True	AATAAA	-23	NA	134195636	134201150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
Isoform_133177_3	chr4	+	1465	4	NIC	ENSMUSG00000028832.12	novel	1060	5	NA	NA	0	-7	intron_retention	FALSE	canonical	3	455	junction_1	267.265577448516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGACTTCTTTCTGTTC	NA	False	NA	4	True	AATAAA	-20	NA	134195709	134201147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_134195741_134197413_134198151_134200114_134200307_134200642
Isoform_133179_6	chr4	+	2123	3	FSM	ENSMUSG00000037348.16	ENSMUST00000136171.8	890	3	32	-1265	3	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTTGTTTTGACTCCT	NA	False	NA	17	True	AATAAA	-18	NA	134224317	134236122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134224348_134227910_134227995_134234113
Isoform_133181_12	chr4	+	4877	4	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	27	3656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	208.686367547092	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	134238336	134254894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_134238481_134248782_134248913_134250264_134251348_134251374
Isoform_133182_486	chr4	+	1245	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	27	3	27	-3	multi-exon	FALSE	canonical	3	435	junction_2	7.5	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTGGTGTCGTGCT	NA	False	NA	17	True	AATAAA	-17	NA	134238336	134251235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134238481_134248782_134248913_134250264
Isoform_133185_6	chr4	+	1308	9	ISM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	11775	0	-3499	0	3prime_fragment	FALSE	canonical	3	9	junction_1	6.25999201277446	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAAGGTCTCTTTCTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	134603621	134623483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_134603813_134607200_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
Isoform_133186_4	chr4	+	1219	8	ISM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	15249	3	-25	-3	3prime_fragment	FALSE	canonical	3	9	junction_1	5.80288457473997	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCCACAAGGTCTCTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	134607095	134623480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
Isoform_133187_3	chr4	+	1433	8	ISM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	15037	1	-237	-1	3prime_fragment	FALSE	canonical	3	9	junction_1	5.80288457473997	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAAGGTCTCTTTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	134606883	134623482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
Isoform_133195_74	chr4	+	2171	6	FSM	ENSMUSG00000037266.19	ENSMUST00000145364.8	2151	6	-20	0	-1	0	multi-exon	FALSE	canonical	3	46	junction_4	379.006385170488	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134653336_134654130_134654241
Isoform_133198_43	chr4	+	1462	6	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	31	junction_4	383.058011272444	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134654045_134654130_134654241
Isoform_133201_230	chr4	+	2375	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	141	junction_3	314.200075588788	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134654130_134654241
Isoform_133208_48	chr4	+	2126	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	19	junction_3	366.739945329112	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653336_134654130_134654241
Isoform_133210_304	chr4	+	1417	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	33	299	-1	0	multi-exon	FALSE	canonical	3	162	junction_3	305.166348079207	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
Isoform_133211_37	chr4	+	1469	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	-19	299	-19	0	multi-exon	FALSE	canonical	3	162	junction_3	305.166348079207	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650883	134654683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
Isoform_133217_44	chr4	+	2137	5	NIC	ENSMUSG00000037266.19	novel	1749	5	NA	NA	1	4	intron_retention	FALSE	canonical	3	56	junction_3	350.79659348403	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATGTTGAATGTGTCT	NA	False	NA	25	True	AATAAA	-25	NA	134650937	134654687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_134651079_134651185_134651794_134652603_134653462_134654045_134654130_134654241
Isoform_133219_1627	chr4	+	2717	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	35	299	1	0	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650937	134654683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
Isoform_133220_117	chr4	+	3016	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	35	0	1	0	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTAGTTGTGAATGGTAG	NA	False	NA	9	True	NA	NA	NA	134650937	134654982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
Isoform_133221_44	chr4	+	2764	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	-12	299	-12	0	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650890	134654683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
Isoform_133249_276	chr4	+	1277	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	84	8	-28	-8	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGAACAGTGTCTGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	134658292	134664851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
Isoform_133253_37	chr4	+	1353	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	8	8	4	-8	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGAACAGTGTCTGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	134658216	134664851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
Isoform_133255_9	chr4	+	1386	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	-25	8	-25	-8	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGAACAGTGTCTGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	134658183	134664851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
Isoform_133256_4	chr4	+	1843	4	ISM	ENSMUSG00000028801.15	ENSMUST00000063707.3	2380	9	29182	104	29182	-104	3prime_fragment	FALSE	canonical	3	11	junction_1	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAAGCCGGGTTCTTTGTG	NA	False	NA	7	True	ATTAAA	-19	NA	135252479	135265010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_135252843_135256802_135256969_135260949_135261141_135263887
Isoform_133258_3	chr4	+	1931	4	ISM	ENSMUSG00000028801.15	ENSMUST00000063707.3	2380	9	29093	105	29093	-105	3prime_fragment	FALSE	canonical	3	11	junction_1	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAAGCCGGGTTCTTTGT	NA	False	NA	6	True	ATTAAA	-18	NA	135252390	135265009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_135252843_135256802_135256969_135260949_135261141_135263887
Isoform_133259_6	chr4	+	1604	4	ISM	ENSMUSG00000028801.15	ENSMUST00000063707.3	2380	9	29422	103	29422	-103	3prime_fragment	FALSE	canonical	3	11	junction_1	4.02768199119819	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCGGGTTCTTTGTGA	NA	False	NA	8	True	ATTAAA	-20	NA	135252719	135265011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_135252843_135256802_135256969_135260949_135261141_135263887
Isoform_133260_7	chr4	+	2780	2	FSM	ENSMUSG00000086788.3	ENSMUST00000134416.2	1002	2	-65	-1713	54	0	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGCAATCATTAAGA	NA	False	NA	NA	False	NA	NA	NA	135354019	135357509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135354357_135355066
Isoform_133261_34	chr4	+	3971	7	FSM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	209	2	209	-2	multi-exon	FALSE	canonical	3	21	junction_5	3.02305952453618	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAATGTGCACGCAGTT	NA	False	NA	5	True	AATAAA	-19	NA	135413806	135435490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432363
Isoform_133263_10	chr4	+	4253	7	FSM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	-73	2	-73	-2	multi-exon	TRUE	canonical	3	21	junction_5	3.02305952453618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAATGTGCACGCAGTT	NA	False	NA	5	True	AATAAA	-19	NA	135413524	135435490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432363
Isoform_133264_9	chr4	+	4662	28	ISM	ENSMUSG00000037139.16	ENSMUST00000105854.2	5575	37	15699	3	15699	-3	3prime_fragment	FALSE	canonical	2	3	junction_8	2.88793906512858	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCAGCACCCGTGGTCT	6727	False	NA	NA	False	AATAAA	-26	NA	135502724	135542872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
Isoform_133265_5	chr4	+	1822	5	ISM	ENSMUSG00000037139.16	ENSMUST00000145304.8	2551	13	10471	2	8017	-2	3prime_fragment	FALSE	canonical	3	9	junction_1	2.1650635094611	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCAGCACCCGTGGTCTC	NA	False	NA	NA	False	AATAAA	-27	NA	135535971	135542873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
Isoform_133269_6	chr4	+	3100	7	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	589.701454598474	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGATTAACTGGAATT	4699	False	NA	NA	False	AATAAA	-15	NA	135583435	135593124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589084_135589189_135590350_135590514_135590833_135590888_135591039
Isoform_133270_51	chr4	+	5673	6	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	381	junction_2	439.264567202956	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGATTAACTGGAATT	4698	False	NA	NA	False	AATAAA	-15	NA	135583434	135593124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590833_135590888_135591039
Isoform_133271_4	chr4	+	4019	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	14	335	at_least_one_novel_splicesite	FALSE	non_canonical	3	30	junction_3	581.553499019843	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAAGAGTCCAGTTTGT	4720	False	NA	9	True	ATTAAA	-23	NA	135583456	135591515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_135583603_135585615_135585783_135586152_135587688_135587710_135589189_135590350_135590514_135590833_135590888_135591039
Isoform_133273_15	chr4	+	5646	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	30	junction_3	590.400829004236	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGATTAACTGGAATT	4699	False	NA	NA	False	AATAAA	-15	NA	135583435	135593124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_135583603_135585615_135585783_135586152_135587688_135587710_135589189_135590350_135590514_135590836_135590888_135591039
Isoform_133274_4	chr4	+	6047	5	NIC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	6	-4	intron_retention	FALSE	canonical	3	1107	junction_4	226.840252159973	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAATGATTAACTGGAA	4692	False	NA	NA	False	AATAAA	-13	NA	135583428	135593122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_135583603_135585615_135589189_135590350_135590514_135590833_135590888_135591039
Isoform_133280_330	chr4	+	1479	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	24	1022	24	0	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGGTCAATCTCCCAA	NA	False	NA	20	True	AATAAA	-20	NA	135648069	135666600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
Isoform_133282_17	chr4	+	2440	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	24	61	24	-61	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCATGTGATAGGTTTCT	NA	False	NA	NA	False	AGTAAA	-26	NA	135648069	135667561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
Isoform_133287_1018	chr4	+	1396	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	18	4	1	-4	multi-exon	FALSE	canonical	3	659	junction_3	79.965617611571	1018	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCAAACGTGTGTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	135673776	135689924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
Isoform_133291_178	chr4	+	1400	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	28	2	-2	-2	multi-exon	FALSE	canonical	3	107	junction_1	18.7712546197637	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGATTCTCACAGATG	4590	False	NA	9	True	AATAAA	-17	NA	135691065	135695487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
Isoform_133292_45	chr4	+	1430	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	18.7712546197637	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGATTCTCACAGATGGC	4562	False	NA	11	True	AATAAA	-19	NA	135691037	135695489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
Isoform_133295_27	chr4	+	946	3	FSM	ENSMUSG00000007872.4	ENSMUST00000008016.3	1278	3	327	5	-40	-5	multi-exon	FALSE	canonical	3	22	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTATGACATCTTGC	732	False	NA	6	True	AATAAA	-14	NA	135871134	135872698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135871490_135871604_135871688_135872190
Isoform_133301_93	chr4	+	4856	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	-119	2	-119	-2	multi-exon	FALSE	canonical	1	25	junction_4	12.2395079784914	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTTGGTGTGATT	937	False	NA	14	True	ATTAAA	-18	NA	135899585	135923366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
Isoform_133304_68	chr4	+	3912	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	0	313	0	-313	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAACTTGTGTTCATCTC	1322	False	NA	8	True	AAAACA	-20	NA	135933675	135972214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
Isoform_133310_12	chr4	+	1290	7	ISM	ENSMUSG00000001604.15	ENSMUST00000102533.11	1251	11	5	9433	5	981	5prime_fragment	FALSE	canonical	3	647	junction_4	43.1972221329104	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTGTGGCTTGCCAGA	6608	False	NA	NA	False	TATAAA	-32	NA	135975267	135992776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182
Isoform_133312_22	chr4	+	4522	3	FSM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	23	94	-14	-94	multi-exon	FALSE	canonical	2	10	junction_1	4	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACTGAGTTATCTTG	NA	False	NA	13	True	ATTAAA	-19	NA	136013400	136021159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_136013793_136014382_136014627_136017273
Isoform_133314_15	chr4	+	4406	3	FSM	ENSMUSG00000051351.15	ENSMUST00000130658.2	791	3	-14	-3601	-14	-93	multi-exon	FALSE	canonical	3	10	junction_1	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGAGTTATCTTGG	NA	False	NA	14	True	ATTAAA	-20	NA	136013400	136021160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_136013793_136014499_136014627_136017273
Isoform_133317_291	chr4	+	2669	11	FSM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	9	18774	9	-8	multi-exon	FALSE	canonical	3	130	junction_1	138.01771625411	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038287	136067984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_136038401_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
Isoform_13332_331	chr11	-	4009	30	FSM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	45	6	5	-6	multi-exon	TRUE	canonical	3	227	junction_19	35.2603363548522	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGTACTTTTAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	60618044	60604974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
Isoform_133322_340	chr4	+	2649	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	26	8	26	-8	multi-exon	FALSE	canonical	3	160	junction_1	130.381325349914	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038304	136067984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
Isoform_133324_15	chr4	+	2641	11	NIC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	-18	-8	combination_of_known_junctions	FALSE	canonical	3	84	junction_3	176.949258263492	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038317	136067984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_136038401_136041400_136041567_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
Isoform_133327_448	chr4	+	2500	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	35	8	9	-8	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038287	136067984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
Isoform_133330_117	chr4	+	2500	10	FSM	ENSMUSG00000066037.15	ENSMUST00000084219.12	2647	10	-43	190	14	-8	multi-exon	FALSE	canonical	3	84	junction_2	166.354225660371	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038292	136067984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
Isoform_133343_5	chr4	+	1377	3	NNC	ENSMUSG00000001089.15	novel	418	2	NA	NA	3	942	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	84.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4160	False	NA	NA	False	NA	NA	NA	136197074	136249963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_136197162_136248651_136249851_136249872
Isoform_133346_64	chr4	+	7525	5	FSM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	5	-4	5	0	multi-exon	FALSE	canonical	3	55	junction_3	50.5488624995657	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGAGTCAGTGATGCC	4162	False	NA	15	True	AATAAA	-21	NA	136197076	136276630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_136197162_136248651_136248755_136266435_136266528_136267666_136270830_136272548
Isoform_133351_113	chr4	+	7433	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	5	0	5	0	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGAGTCAGTGATGCC	4162	False	NA	15	True	AATAAA	-21	NA	136197076	136276630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
Isoform_133362_15	chr4	+	1409	10	ISM	ENSMUSG00000028763.19	ENSMUST00000030547.15	14187	97	4	58547	4	-16814	5prime_fragment	FALSE	canonical	3	21	junction_4	6.76227735764575	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCGTCCCTAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	137196083	137239394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152
Isoform_133363_26	chr4	+	2439	14	NNC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	3	-15384	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	9.74952585707991	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGCTTTTAATTCCA	NA	False	NA	NA	False	NA	NA	NA	137196082	137240824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240287_137240328
Isoform_133365_3	chr4	+	4119	24	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	84913	1	-15455	-1	3prime_fragment	FALSE	canonical	3	32	junction_7	13.1556050141841	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	3438	False	NA	27	True	AATAAA	-16	NA	137281026	137297939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
Isoform_133366_4	chr4	+	3820	23	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	86444	1	-13924	-1	3prime_fragment	FALSE	canonical	3	32	junction_6	13.188791259097	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	4969	False	NA	27	True	AATAAA	-16	NA	137282557	137297939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
Isoform_133367_4	chr4	+	3712	22	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	87898	1	-12470	-1	3prime_fragment	FALSE	canonical	3	32	junction_5	13.3248272186983	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	6423	False	NA	27	True	AATAAA	-16	NA	137284011	137297939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
Isoform_133368_4	chr4	+	3388	20	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	90028	3	-10340	-3	3prime_fragment	FALSE	canonical	3	32	junction_3	13.3665560240699	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGATGTCTCCTGTTTCA	8553	False	NA	25	True	AATAAA	-14	NA	137286141	137297937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
Isoform_133370_4	chr4	+	3151	18	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	90508	3	-9860	-3	3prime_fragment	FALSE	canonical	3	32	junction_1	13.8524103807388	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGATGTCTCCTGTTTCA	9033	False	NA	25	True	AATAAA	-14	NA	137286621	137297937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
Isoform_133371_4	chr4	+	2933	16	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	92876	-1	-7492	0	3prime_fragment	FALSE	canonical	3	34	junction_4	12.7436258576592	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTCCTGTTTCAATGA	NA	False	NA	29	True	AATAAA	-18	NA	137288989	137297941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
Isoform_133372_7	chr4	+	2679	14	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	93365	1	-7003	-1	3prime_fragment	FALSE	canonical	3	34	junction_2	13.248199609736	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	NA	False	NA	27	True	AATAAA	-16	NA	137289478	137297939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
Isoform_133388_88	chr4	+	2055	14	ISM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	82	33244	-6	-4	5prime_fragment	FALSE	canonical	3	237	junction_13	305.607804510151	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	585	False	NA	NA	False	AATAAA	-2	NA	137321532	137352598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467
Isoform_133389_39	chr4	+	3567	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-28	11	combination_of_known_junctions	FALSE	canonical	3	237	junction_13	322.560439780494	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	542	False	NA	19	True	AATAAA	-31	NA	137321489	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133391_53	chr4	+	3528	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10	11	combination_of_known_junctions	FALSE	canonical	3	237	junction_13	322.560439780494	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	581	False	NA	19	True	AATAAA	-31	NA	137321528	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133397_81	chr4	+	3470	27	FSM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	82	2189	-6	11	multi-exon	FALSE	canonical	3	237	junction_13	294.548307788895	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	585	False	NA	19	True	AATAAA	-31	NA	137321532	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133399_39	chr4	+	5659	27	FSM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	82	0	-6	0	multi-exon	FALSE	canonical	3	237	junction_13	294.548307788895	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	585	False	NA	17	True	ATTAAA	-27	NA	137321532	137385842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_13340_244	chr11	-	3622	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	118	1	17	0	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGTGGCATTCAGT	NA	False	NA	0	True	AATAAA	-15	NA	60668073	60630884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_133402_374	chr4	+	2059	14	FSM	ENSMUSG00000043411.16	ENSMUST00000105839.8	2071	14	8	4	8	-4	multi-exon	FALSE	canonical	3	659	junction_9	177.170128514572	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	578	False	NA	NA	False	AATAAA	-2	NA	137321525	137352598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470
Isoform_133403_77	chr4	+	2108	14	FSM	ENSMUSG00000043411.16	ENSMUST00000105839.8	2071	14	-41	4	26	-4	multi-exon	FALSE	canonical	3	659	junction_9	177.170128514572	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	529	False	NA	NA	False	AATAAA	-2	NA	137321476	137352598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470
Isoform_133407_304	chr4	+	3521	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-6	11	combination_of_known_junctions	FALSE	canonical	3	555	junction_19	264.570952206992	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	585	False	NA	19	True	AATAAA	-31	NA	137321532	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133409_171	chr4	+	5714	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10	0	intron_retention	FALSE	canonical	3	555	junction_19	264.570952206992	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	581	False	NA	17	True	ATTAAA	-27	NA	137321528	137385842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133416_213	chr4	+	5661	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	10	0	intron_retention	FALSE	canonical	3	659	junction_9	223.123509724359	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	580	False	NA	17	True	ATTAAA	-27	NA	137321527	137385842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133418_367	chr4	+	3467	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-6	11	combination_of_known_junctions	FALSE	canonical	3	659	junction_9	223.123509724359	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	585	False	NA	19	True	AATAAA	-31	NA	137321532	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_13342_6	chr11	-	4587	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	94	-940	-6	940	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAGAAAAAGAGGGAGAA	NA	False	NA	NA	False	NA	NA	NA	60668097	60629943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_133437_54	chr4	+	3525	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10	11	combination_of_known_junctions	FALSE	canonical	3	237	junction_13	327.669427582573	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	581	False	NA	19	True	AATAAA	-31	NA	137321528	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_13344_10	chr11	-	4201	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	101	-561	0	561	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCATTTGTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	60668090	60630322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_133443_39	chr4	+	3471	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-10	11	combination_of_known_junctions	FALSE	canonical	3	237	junction_13	300.621053406908	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	581	False	NA	19	True	AATAAA	-31	NA	137321528	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_13345_4	chr11	-	3868	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	-127	0	-127	0	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGTGGCATTCAGTC	NA	False	NA	1	True	AATAAA	-16	NA	60668318	60630883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_133452_161	chr4	+	3522	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	11	2189	-10	11	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	581	False	NA	19	True	AATAAA	-31	NA	137321528	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133453_83	chr4	+	5707	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	15	0	-6	0	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	585	False	NA	17	True	ATTAAA	-27	NA	137321532	137385842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133454_93	chr4	+	3552	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	-19	2189	-19	11	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	551	False	NA	19	True	AATAAA	-31	NA	137321498	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133456_55	chr4	+	5741	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	-19	0	-19	0	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	551	False	NA	17	True	ATTAAA	-27	NA	137321498	137385842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133460_136	chr4	+	5676	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-9	0	intron_retention	FALSE	canonical	3	584	junction_9	231.427832630339	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	561	False	NA	16	True	ATTAAA	-26	NA	137321508	137385841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133461_257	chr4	+	3492	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-13	11	combination_of_known_junctions	FALSE	canonical	3	584	junction_9	231.427832630339	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	557	False	NA	19	True	AATAAA	-31	NA	137321504	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_133463_48	chr4	+	3517	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	29	11	combination_of_known_junctions	FALSE	canonical	3	584	junction_9	231.427832630339	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	532	False	NA	19	True	AATAAA	-31	NA	137321479	137383653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_13349_17	chr11	-	3778	18	NIC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	17	0	intron_retention	FALSE	canonical	3	121	junction_8	19.1988321444129	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGTGGCATTCAGT	NA	False	NA	0	True	AATAAA	-15	NA	60668073	60630884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_133494_7	chr4	+	3267	25	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	42.7395008224892	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	3348	False	NA	11	True	AATAAA	-21	NA	137392047	137457172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137392156_137410771_137410808_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_133495_19	chr4	+	3266	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	41.4733385102208	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	3342	False	NA	9	True	AATAAA	-19	NA	137392041	137457170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
Isoform_133496_40	chr4	+	3234	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	40.9493208845687	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	3345	False	NA	11	True	AATAAA	-21	NA	137392044	137457172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_133498_12	chr4	+	3236	23	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	41.2645416392114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	9913	False	NA	11	True	AATAAA	-21	NA	137434795	137457172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
Isoform_133499_31	chr4	+	3221	23	FSM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	-53	0	-53	0	multi-exon	FALSE	canonical	3	26	junction_1	40.603123480388	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	9897	False	NA	11	True	AATAAA	-21	NA	137434779	137457172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_133501_6	chr4	+	2562	15	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	9794	3	-1556	-2	3prime_fragment	FALSE	canonical	3	33	junction_2	41.2145332995782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCCGGAGTTAAGAACAG	NA	False	NA	8	True	AATAAA	-18	NA	137444626	137457169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_133503_27	chr4	+	1947	10	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	1062	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	31.0304509939654	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	11	True	AATAAA	-21	NA	137447244	137457172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
Isoform_133504_63	chr4	+	1916	10	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	12412	0	1062	0	3prime_fragment	FALSE	canonical	3	83	junction_7	18.9326290948839	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	11	True	AATAAA	-21	NA	137447244	137457172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_133506_16	chr4	+	2418	9	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	1040	0	intron_retention	FALSE	canonical	3	96	junction_1	15.0893174133226	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	11	True	AATAAA	-21	NA	137447222	137457172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455675_137455838_137455880_137456185
Isoform_133508_4	chr4	+	1865	10	NIC	ENSMUSG00000041351.17	novel	3247	25	NA	NA	1059	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	39.122157530951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	10	True	AATAAA	-20	NA	137447241	137457171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137455040_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_133509_4	chr4	+	3033	8	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	1026	0	intron_retention	FALSE	canonical	3	96	junction_1	15.4166620702328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	11	True	AATAAA	-21	NA	137447208	137457172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137455675_137455838_137455880_137456185
Isoform_133512_66	chr4	+	4684	19	NIC	ENSMUSG00000057530.15	novel	4816	20	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_1	12.6238310789994	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	NA	False	NA	16	True	AATAAA	-16	NA	137589593	137692540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137589693_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
Isoform_133514_57	chr4	+	4684	19	NIC	ENSMUSG00000057530.15	novel	728	5	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	12.6238310789994	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	516	False	NA	16	True	AATAAA	-16	NA	137640841	137692540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137640941_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
Isoform_133517_64	chr4	+	3289	13	FSM	ENSMUSG00000028759.14	ENSMUST00000030541.13	3311	13	6	16	-1	6	multi-exon	FALSE	canonical	3	41	junction_1	22.3320895176027	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACAGCTTAGTGAAAAGT	4571	False	NA	26	True	AATAAA	-24	NA	137943943	137970465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_133518_7	chr4	+	3256	13	NIC	ENSMUSG00000028759.14	novel	3311	13	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	30.5586867082559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACAGCTTAGTGAAAAGT	4565	False	NA	26	True	AATAAA	-24	NA	137943937	137970465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137944052_137948836_137949035_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_13352_4	chr11	-	3874	18	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_6	40.6151658312721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTCTGGTGGCATTCA	NA	False	NA	-2	True	AATAAA	-13	NA	60668097	60630886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639126_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_133520_64	chr4	+	3117	12	FSM	ENSMUSG00000028759.14	ENSMUST00000097836.10	3113	12	6	-10	-1	10	multi-exon	FALSE	canonical	3	37	junction_1	20.9126479187884	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTCCTGCAATCTCTC	4571	False	NA	52	True	TTTAAA	-36	NA	137943943	137970491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137944052_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_133521_6	chr4	+	3061	12	NIC	ENSMUSG00000028759.14	novel	3113	12	NA	NA	-13	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	30.9291378840073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCTGAACTACAGCT	4551	False	NA	15	True	AATAAA	-13	NA	137943923	137970454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137944052_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_133522_13	chr4	+	3208	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	132	21	-5	1	multi-exon	FALSE	canonical	3	21	junction_1	26.2752524039045	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACTACAGCTTAGTGA	5201	False	NA	21	True	AATAAA	-19	NA	137944573	137970460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_133523_10	chr4	+	3300	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	34	27	34	-5	multi-exon	FALSE	canonical	3	21	junction_1	26.2752524039045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCTGAACTACAGCT	5103	False	NA	15	True	AATAAA	-13	NA	137944475	137970454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_133526_15	chr4	+	3152	12	NIC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.9615581863273	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCTTAGTGAAAAGTTT	5066	False	NA	28	True	AATAAA	-26	NA	137944438	137970467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_137944606_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_133528_6	chr4	+	3131	10	FSM	ENSMUSG00000045349.16	ENSMUST00000105824.8	3512	10	12	369	2	-369	multi-exon	FALSE	canonical	1	2	junction_6	2.55796987404919	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGAAGTCGTTTTCCTG	NA	False	NA	NA	False	AATAAA	-18	NA	137977725	137988274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_137977820_137981141_137981270_137981583_137981665_137982008_137982084_137982862_137983010_137984023_137984276_137984425_137984601_137984915_137985025_137985479_137985640_137986364
Isoform_133529_5066	chr4	+	1572	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	146	402	146	-402	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	5066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACCTGGCCCCATGA	NA	False	NA	32	True	AATAAA	-18	NA	138032186	138039537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
Isoform_13353_4	chr11	-	3569	18	FSM	ENSMUSG00000002814.16	ENSMUST00000102668.10	3542	18	-28	1	-6	-1	multi-exon	FALSE	canonical	3	121	junction_7	18.3744218184581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCTAAGTAGATCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	60668119	60632717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_133530_1932	chr4	+	1965	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	146	9	146	-9	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	1932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTCCTATCAGTGTTC	NA	False	NA	28	True	NA	NA	NA	138032186	138039930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
Isoform_133531_256	chr4	+	2105	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	1	14	1	-14	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCTAGGTCCTATCAG	NA	False	NA	23	True	NA	NA	NA	138032041	138039925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
Isoform_133532_399	chr4	+	1727	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	-2	395	-2	-395	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCCCATGACACTGAT	NA	False	NA	39	True	AATAAA	-25	NA	138032038	138039544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
Isoform_13354_12	chr11	-	3215	18	FSM	ENSMUSG00000002814.16	ENSMUST00000102668.10	3542	18	-5	332	-5	11	multi-exon	FALSE	canonical	3	121	junction_7	18.3744218184581	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATCAGGCATCTTTCAT	NA	False	NA	NA	False	AATAAA	-9	NA	60668096	60633048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_133558_7	chr4	+	1574	5	NIC	ENSMUSG00000041241.13	novel	3944	5	NA	NA	15	896	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	95.7584852637091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGTCCTCTCCGACTC	NA	False	NA	18	True	NA	NA	NA	138162002	138167218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_138162191_138163490_138163711_138164938_138165027_138165552_138165674_138166261
Isoform_133561_79	chr4	+	3701	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	12	20	6	-17	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTTTCTTTCATGAGT	NA	False	NA	4	True	NA	NA	NA	138161993	138169556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
Isoform_133563_407	chr4	+	1354	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	21	2358	15	896	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGTCCTCTCCGACTC	NA	False	NA	18	True	NA	NA	NA	138162002	138167218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
Isoform_133565_10	chr4	+	4442	5	NNC	ENSMUSG00000041241.13	novel	3733	4	NA	NA	7	762	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	87.7638877899105	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGACGGTTGCCACCT	NA	False	NA	NA	False	ATTAAA	-13	NA	138161994	138170338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261_138169091_138169130
Isoform_133573_6	chr4	+	1621	6	FSM	ENSMUSG00000028750.13	ENSMUST00000030530.6	1618	6	1	-4	1	4	multi-exon	FALSE	canonical	1	1	junction_2	1.01980390271856	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTCTGAAGTTGATG	NA	False	NA	NA	False	AGTAAA	-19	NA	138452636	138471890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138452800_138453041_138453169_138458834_138458936_138461572_138461718_138463292_138463397_138470909
Isoform_133574_26	chr4	+	3017	17	NIC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	17.3561048337465	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGGGTTCTTCTTTTCA	NA	False	NA	25	True	AATAAA	-16	NA	138700219	138786479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_138700301_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_133575_111	chr4	+	3011	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	307	0	303	0	multi-exon	FALSE	canonical	3	56	junction_1	8.00780868902348	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	NA	False	NA	24	True	AATAAA	-15	NA	138700522	138786478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_133576_30	chr4	+	3048	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	275	-5	271	1	multi-exon	FALSE	canonical	3	56	junction_1	8.00780868902348	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTCTTCTTTTCACCTT	NA	False	NA	29	True	AATAAA	-20	NA	138700490	138786483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_133577_11	chr4	+	3347	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	-29	0	-12	0	multi-exon	FALSE	canonical	3	56	junction_1	8.00780868902348	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	NA	False	NA	24	True	AATAAA	-15	NA	138700186	138786478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_133579_3	chr4	+	3250	18	NNC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	301	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	23.8819182805998	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTTCTTCTTTTCACC	NA	False	NA	27	True	AATAAA	-18	NA	138700520	138786481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138719098_138719333_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_133580_4	chr4	+	2902	16	NNC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	297	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.4464039618645	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGGGTTCTTCTTTTCA	NA	False	NA	25	True	AATAAA	-16	NA	138700516	138786479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_138700599_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779929_138781210_138781329_138785422
Isoform_133582_9	chr4	+	2328	8	NIC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	46752	0	intron_retention	FALSE	canonical	3	62	junction_4	9.15624020512118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	NA	False	NA	24	True	AATAAA	-15	NA	138746971	138786478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_133587_915	chr4	+	1581	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	32	61	7	-1	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	-53	True	NA	NA	NA	138920241	139019068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
Isoform_133589_685	chr4	+	1634	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	39	1	-1	-1	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGCGCTGGCTGTACGTT	NA	False	NA	7	True	NA	NA	NA	138920248	139019128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
Isoform_133591_33	chr4	+	1149	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	9	516	9	-138	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGACCGTGTGGTTTTGT	NA	False	NA	54	True	NA	NA	NA	138920218	139018613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
Isoform_133602_405	chr4	+	1281	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	7	0	7	0	multi-exon	FALSE	canonical	3	253	junction_5	35.9787746070127	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTCTCCTCTGCTGCCC	NA	False	NA	29	True	AATAAA	-40	NA	139038061	139045737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
Isoform_133605_18	chr4	+	4933	23	FSM	ENSMUSG00000078517.13	ENSMUST00000082262.8	6226	23	17	1276	0	218	multi-exon	FALSE	non_canonical	0	0	junction_13	89.6176912139138	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTTTGTTTTGTGTCT	NA	False	NA	14	True	AATAAA	-16	NA	139079920	139104765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092496_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
Isoform_133608_728	chr4	+	4927	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	0	-221	0	221	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTTGTGTCTTCA	NA	False	NA	17	True	AATAAA	-19	NA	139079920	139104768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
Isoform_133610_80	chr4	+	6183	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	0	-1477	0	-17	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGCTTCATATTATTT	NA	False	NA	9	True	NA	NA	NA	139079920	139106024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
Isoform_133627_3	chr4	+	2282	11	FSM	ENSMUSG00000066036.15	ENSMUST00000133220.2	1626	11	-49	-607	-39	607	multi-exon	FALSE	canonical	3	89	junction_4	10.1370607179793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGAGCCAGCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	139107930	139125616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604
Isoform_133632_5	chr4	+	7880	53	ISM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	56437	61	2086	-3	3prime_fragment	TRUE	canonical	0	0	junction_16	90.9607720735319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGGGGTCTAGCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	139164406	139216838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_133633_5	chr4	+	7073	47	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	62794	-7	8443	7	3prime_fragment	FALSE	canonical	0	0	junction_10	86.4363818634308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCTGCTGCTTGCCCAG	NA	False	NA	29	True	AATAAA	-30	NA	139170763	139216848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_133642_8	chr4	+	6139	41	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	69783	-3	-12817	3	3prime_fragment	FALSE	canonical	0	0	junction_4	85.0382230235322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	NA	False	NA	25	True	AATAAA	-26	NA	139177752	139216844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_133648_12	chr4	+	5114	34	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	74897	0	-7703	0	3prime_fragment	FALSE	canonical	3	159	junction_1	70.1651861801763	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTCTAGCTGCTGCT	NA	False	NA	22	True	AATAAA	-23	NA	139182866	139216841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_133666_13	chr4	+	3602	24	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	82854	-1	254	1	3prime_fragment	FALSE	canonical	3	232	junction_3	60.0619088295529	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGTCTAGCTGCTGCTT	2605	False	NA	23	True	AATAAA	-24	NA	139190823	139216842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_133676_15	chr4	+	2923	19	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	86584	-3	3984	3	3prime_fragment	FALSE	canonical	3	267	junction_9	52.1600102249479	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	444	False	NA	25	True	AATAAA	-26	NA	139194553	139216844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_133684_15	chr4	+	2548	16	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	89017	1	6417	-1	3prime_fragment	FALSE	canonical	3	267	junction_6	50.682629064492	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGGTCTAGCTGCTGC	2877	False	NA	21	True	AATAAA	-22	NA	139196986	139216840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_133689_15	chr4	+	2219	13	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	91073	6	-5321	-6	3prime_fragment	FALSE	canonical	3	267	junction_3	48.3741207212654	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAAAGGGGTCTAGCT	727	False	NA	16	True	AATAAA	-17	NA	139199042	139216835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_13369_1469	chr11	-	1988	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	77	793	77	4	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCTTACTCGGTGGG	NA	False	NA	-12	True	ATTAAA	-16	NA	60702014	60679722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
Isoform_13370_1208	chr11	-	2774	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	77	7	77	-7	multi-exon	TRUE	canonical	3	983	junction_2	78.1211180853749	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACACTCCTCATATT	NA	False	NA	-15	True	AATAAA	-12	NA	60702014	60678936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
Isoform_133704_7	chr4	+	2475	9	FSM	ENSMUSG00000041025.16	ENSMUST00000174078.2	5716	9	-70	3311	-70	-11	multi-exon	TRUE	canonical	0	0	junction_1	1.79843682124227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAACA	NA	False	NA	NA	False	TTTAAA	-8	NA	139301960	139344382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_139302909_139330523_139330585_139332309_139332406_139333732_139333874_139334915_139335056_139341104_139341226_139341336_139341430_139342241_139342373_139343638
Isoform_133706_43	chr4	+	3380	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	-6	8	-6	-5	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTATATTTTGATCG	NA	False	NA	18	True	NA	NA	NA	139350170	139376993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
Isoform_133708_421	chr4	+	3141	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	233	8	-10	-5	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTATATTTTGATCG	NA	False	NA	18	True	NA	NA	NA	139350409	139376993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
Isoform_13371_282	chr11	-	2018	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	47	793	47	4	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCTTACTCGGTGGG	NA	False	NA	-12	True	ATTAAA	-16	NA	60702044	60679722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
Isoform_133719_8	chr4	+	2141	5	ISM	ENSMUSG00000028737.16	ENSMUST00000146309.8	4142	15	19446	5	19231	-5	intron_retention	FALSE	canonical	3	214	junction_4	20.4511613362176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTATATTTTGATCG	6043	False	NA	18	True	NA	NA	NA	139369650	139376993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
Isoform_13372_192	chr11	-	2822	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	29	7	29	-7	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACACTCCTCATATT	NA	False	NA	-15	True	AATAAA	-12	NA	60702062	60678936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
Isoform_133724_6	chr4	+	644	2	ISM	ENSMUSG00000087084.2	ENSMUST00000126252.2	1720	3	-158	3089	-158	-3089	5prime_fragment	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCCTTTTTTTGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	140107782	140109796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_140108031_140109400
Isoform_133725_4	chr4	+	975	2	NIC	ENSMUSG00000087084.2	novel	1720	3	NA	NA	-158	-775	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCGGTCTTGTCCCTAG	NA	False	NA	NA	False	AATACA	-14	NA	140107782	140112110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_140108031_140111383
Isoform_133747_1589	chr4	+	2006	13	FSM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	11	1750	11	-1750	multi-exon	FALSE	canonical	3	3313	junction_2	495.610285966257	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTTGTATTTCTTT	2392	False	NA	13	True	NA	NA	NA	140428794	140448781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
Isoform_133749_1221	chr4	+	3750	13	FSM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	11	6	11	-6	multi-exon	FALSE	canonical	3	3313	junction_2	495.610285966257	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	2392	False	NA	22	True	AATAAA	-15	NA	140428794	140450525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
Isoform_133816_6	chr4	+	2172	16	FSM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	31	2571	31	280	multi-exon	FALSE	canonical	3	23	junction_7	9.97463449622759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGTGCCTTGCTGTCC	NA	False	NA	NA	False	NA	NA	NA	140633685	140677326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140633861_140644883_140645068_140646618_140646692_140651624_140651687_140653446_140653565_140654403_140654530_140659375_140659555_140660057_140660162_140660483_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
Isoform_133817_3	chr4	+	3637	16	FSM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	27	1110	27	-1110	multi-exon	FALSE	canonical	3	23	junction_7	9.97463449622759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATATGAGTACACTGCA	NA	False	NA	NA	False	NA	NA	NA	140633681	140678787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140633861_140644883_140645068_140646618_140646692_140651624_140651687_140653446_140653565_140654403_140654530_140659375_140659555_140660057_140660162_140660483_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
Isoform_133818_6	chr4	+	3728	8	ISM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	26818	5	9003	-5	3prime_fragment	FALSE	canonical	3	24	junction_3	9.73527144994333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACGCGGCTCTGGGTGA	NA	False	NA	3	True	AATAAA	-28	NA	140660472	140679892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
Isoform_133823_2418	chr4	+	953	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	187	2	-11	-2	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	2418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGCGTTACTCTCCATT	NA	False	NA	NA	False	AATAAA	-12	NA	140688700	140706502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
Isoform_133826_115	chr4	+	1055	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	85	2	85	-2	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGCGTTACTCTCCATT	NA	False	NA	NA	False	AATAAA	-12	NA	140688598	140706502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
Isoform_133834_173	chr4	+	3923	29	FSM	ENSMUSG00000036622.16	ENSMUST00000037055.14	3956	29	32	1	5	-1	multi-exon	FALSE	canonical	3	40	junction_19	18.6368011510253	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1434	False	NA	11	True	AATAAA	-16	NA	140714215	140734640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
Isoform_133836_138	chr4	+	3850	29	FSM	ENSMUSG00000036622.16	ENSMUST00000127833.3	3882	29	32	0	5	0	multi-exon	FALSE	canonical	3	40	junction_19	21.6883068279021	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1434	False	NA	12	True	AATAAA	-17	NA	140714215	140734641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
Isoform_133837_21	chr4	+	4081	28	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	23	0	intron_retention	FALSE	canonical	3	40	junction_19	18.4710502737861	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1452	False	NA	12	True	AATAAA	-17	NA	140714233	140734641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140734160_140734251
Isoform_133838_4	chr4	+	3496	27	NIC	ENSMUSG00000036622.16	novel	3882	29	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_25	27.1751115248959	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1412	False	NA	12	True	AATAAA	-17	NA	140714193	140734641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140734063_140734160_140734251
Isoform_133841_94	chr4	+	2653	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	20	3261	11	-3261	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTGGTCTTAGTGGA	NA	False	NA	10	True	AATAAA	-29	NA	140875243	140928112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
Isoform_133842_12	chr4	+	3035	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	16	2883	7	-2883	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCGTCTGTCTGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	140875239	140928490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
Isoform_133844_4	chr4	+	5855	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	72	7	63	-7	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTTAACTGTTTTAT	NA	False	NA	8	True	AATAAA	-12	NA	140875295	140931366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
Isoform_133846_8	chr4	+	5529	8	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	8	-6	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	69.7113582523519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTAACTGTTTTATT	NA	False	NA	9	True	AATAAA	-13	NA	140875240	140931367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_140875491_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
Isoform_133847_3	chr4	+	5399	7	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.2731446809879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTTTTATTAGTA	NA	False	NA	13	True	AATAAA	-17	NA	140875239	140931371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_140875491_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
Isoform_133849_5	chr4	+	5404	8	ISM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	22909	0	22900	0	3prime_fragment	FALSE	canonical	3	186	junction_1	12.8444381674223	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTTTTATTAGTATA	NA	False	NA	15	True	AATAAA	-19	NA	140898132	140931373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
Isoform_133855_34	chr4	+	3678	18	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-73	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.2438244298896	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTAGCATCTGCTT	375	False	NA	13	True	TTTAAA	-17	NA	140966887	140984874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
Isoform_133856_6	chr4	+	3993	18	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-31	356	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.2438244298896	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATATTTTTTTTTCCAGC	417	False	NA	NA	False	NA	NA	NA	140966929	140985231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
Isoform_133858_14	chr4	+	3151	17	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-75	-381	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	14.2531520636665	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGTTGCCAAGAAAGCA	373	False	NA	6	True	ATTAAA	-17	NA	140966885	140984494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
Isoform_133863_43	chr4	+	3954	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	-41	0	-41	0	multi-exon	FALSE	canonical	3	98	junction_7	17.9965274428152	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTCATTCCTGGA	NA	False	NA	8	True	AATAAA	-22	NA	141028509	141056695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
Isoform_133864_168	chr4	+	3912	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	0	1	0	-1	multi-exon	FALSE	canonical	3	98	junction_7	17.9965274428152	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	NA	False	NA	7	True	AATAAA	-21	NA	141028550	141056694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
Isoform_133866_4	chr4	+	3820	17	NIC	ENSMUSG00000006445.4	novel	969	4	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	35.477050240261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	NA	False	NA	7	True	AATAAA	-21	NA	141029723	141056694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_141029827_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
Isoform_133874_69	chr4	+	1494	7	FSM	ENSMUSG00000006218.5	ENSMUST00000006380.5	1433	7	-63	2	-63	-2	multi-exon	FALSE	canonical	3	37	junction_5	7.90393713425292	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAACTTGACCTGGTCT	7123	False	NA	11	True	ATTAAA	-17	NA	141095467	141111484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141095636_141106988_141107105_141107629_141107666_141107912_141108007_141109637_141109821_141110054_141110166_141110698
Isoform_133875_5	chr4	+	1679	5	NNC	ENSMUSG00000006221.8	novel	2769	3	NA	NA	1028	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.53834841531101	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTGGAGACCCCACCT	1176	False	NA	NA	False	AATAAA	-15	NA	141149117	141152624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_141149292_141149811_141149946_141151189_141151687_141151722_141152086_141152113
Isoform_133877_36	chr4	+	2774	15	ISM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	30	-3	0	3	intron_retention	FALSE	canonical	3	129	junction_3	18.407102666401	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGTCCCTGTGTCA	NA	False	NA	8	True	AATAAA	-18	NA	141171994	141194539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984
Isoform_133879_918	chr4	+	2691	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	30	1	0	-1	multi-exon	FALSE	canonical	3	129	junction_3	19.5436832648187	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCCTGTGGTCCCTGT	NA	False	NA	4	True	AATAAA	-14	NA	141171994	141194535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
Isoform_133880_34	chr4	+	2767	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	-41	-4	-41	4	multi-exon	TRUE	canonical	3	129	junction_3	19.5436832648187	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171923	141194540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
Isoform_133886_12	chr4	+	2776	15	FSM	ENSMUSG00000006215.13	ENSMUST00000142438.8	3478	15	1	701	1	4	multi-exon	FALSE	canonical	3	129	junction_3	19.043987749097	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171995	141194540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
Isoform_133889_35	chr4	+	2759	16	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	44.2053792603972	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCCTGTGGTCCCTGT	NA	False	NA	4	True	AATAAA	-14	NA	141172001	141194535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190908_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
Isoform_133891_18	chr4	+	2876	17	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	55.9686016888041	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGTCCCTGTGTCA	NA	False	NA	8	True	AATAAA	-18	NA	141171997	141194539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_141172114_141174561_141174649_141175353_141175538_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
Isoform_133899_3	chr4	+	1317	7	FSM	ENSMUSG00000040706.5	ENSMUST00000038161.5	1407	7	90	0	90	0	multi-exon	FALSE	canonical	1	3	junction_5	1.49071198499986	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGTGGAGTTCAG	NA	False	NA	NA	False	ATTAAA	-15	NA	141474072	141486574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141474411_141476885_141477089_141482135_141482185_141483109_141483306_141484696_141484877_141485649_141485735_141486308
Isoform_133901_184	chr4	+	2047	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	224	1626	-8	663	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCCTGTATTGTCCCTA	NA	False	NA	11	True	AATAAA	-21	NA	141521146	141541661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_133903_156	chr4	+	3704	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	191	2	-41	-2	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGGCATTTTTCC	NA	False	NA	37	True	AATAAA	-19	NA	141521113	141543285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_133906_73	chr4	+	3796	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	99	2	1	-2	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGGCATTTTTCC	NA	False	NA	37	True	AATAAA	-19	NA	141521021	141543285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_133907_21	chr4	+	3892	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	3	2	3	-2	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGGCATTTTTCC	NA	False	NA	37	True	AATAAA	-19	NA	141520925	141543285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_133909_34	chr4	+	2048	9	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-17	658	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	54.6601717432355	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTTAGCCTGTATTGT	NA	False	NA	6	True	AATAAA	-16	NA	141521137	141541656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_133910_28	chr4	+	3675	9	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-16	-3	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	54.6601717432355	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTTGGCATTTTTC	NA	False	NA	36	True	AATAAA	-18	NA	141521138	141543284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_133912_12	chr4	+	3788	9	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	54.6601717432355	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGGCATTTTTCC	NA	False	NA	37	True	AATAAA	-19	NA	141521026	141543285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_133916_6	chr4	+	631	2	FSM	ENSMUSG00000085761.2	ENSMUST00000126231.2	630	2	4	-5	4	5	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAAAGTTCTGTTACA	NA	False	NA	NA	False	CATAAA	-17	NA	141745212	141756312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_141745442_141755910
Isoform_133917_5	chr4	+	2254	2	FSM	ENSMUSG00000028584.4	ENSMUST00000052458.3	2324	2	66	4	66	-4	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGCCTGTAGTCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	143076392	143097598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_143077382_143096333
Isoform_133919_90	chr4	+	3358	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	527	1	-19	-1	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTTCACTTCCTTT	NA	False	NA	9	True	AATAAA	-16	NA	143139522	143147660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
Isoform_13392_33	chr11	-	1247	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	263	1	12	-1	multi-exon	FALSE	canonical	3	26	junction_1	10	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGTTCTCTTTTCTGC	7846	False	NA	-6	True	ATTAAA	-16	NA	60769601	60755278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60756175_60766585_60766874_60769538
Isoform_133924_23	chr4	+	3587	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	298	1	-248	-1	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTTCACTTCCTTT	NA	False	NA	9	True	AATAAA	-16	NA	143139293	143147660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
Isoform_133925_6	chr4	+	3295	4	NIC	ENSMUSG00000046862.15	novel	3260	4	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	75.7011668778406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGTTTCACTTCCTT	NA	False	NA	8	True	AATAAA	-15	NA	143139539	143147659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_143139662_143143189_143143523_143143942_143144531_143145407
Isoform_133928_175	chr4	+	3276	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-17	1	-2	-1	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTTCACTTCCTTT	NA	False	NA	9	True	AATAAA	-16	NA	143139539	143147660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
Isoform_13393_473	chr11	-	959	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	497	1	12	-1	multi-exon	FALSE	canonical	3	675	junction_1	0	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGTTCTCTTTTCTGC	7846	False	NA	-6	True	ATTAAA	-16	NA	60769601	60755278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60756175_60769538
Isoform_133930_31	chr4	+	3522	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-263	1	-248	-1	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTTCACTTCCTTT	NA	False	NA	9	True	AATAAA	-16	NA	143139293	143147660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
Isoform_133934_4	chr4	+	2113	4	Fusion	ENSMUSG00000096154.3_ENSMUSG00000070618.11_ENSMUSG00000095409.2	novel	2056	3	NA	NA	-38	2	multi-exon	TRUE	canonical	1	2	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTATTTTTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	143237874	143300370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_143237929_143281992_143282307_143298345_143298937_143299216
Isoform_133936_11	chr4	+	2117	4	FSM	ENSMUSG00000070619.6	ENSMUST00000094526.5	2094	4	-15	-8	-15	8	multi-exon	TRUE	canonical	1	3	junction_3	3.09120616516523	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTGTTATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	144084496	144090997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_144084551_144088178_144088493_144088970_144089562_144089839
Isoform_133938_3	chr4	+	2055	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	-285	567	-35	0	multi-exon	FALSE	canonical	3	137	junction_1	25.4982352330509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTCGTTCACGTGTT	5661	False	NA	9	True	AATAAA	-16	NA	144619361	144654212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
Isoform_133939_4	chr4	+	1726	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	46	565	-8	-1	multi-exon	FALSE	canonical	3	137	junction_1	25.4982352330509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTCGTTCACGTGTTTG	5992	False	NA	11	True	AATAAA	-18	NA	144619692	144654214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
Isoform_133940_4	chr4	+	1217	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	553	567	411	0	multi-exon	FALSE	canonical	3	137	junction_1	25.4982352330509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTCGTTCACGTGTT	6499	False	NA	9	True	AATAAA	-16	NA	144620199	144654212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
Isoform_133941_3	chr4	+	2137	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	-367	567	-117	0	multi-exon	FALSE	canonical	3	137	junction_1	25.4982352330509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTCGTTCACGTGTT	5579	False	NA	9	True	AATAAA	-16	NA	144619279	144654212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
Isoform_133943_43	chr4	+	2436	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	16	-1907	16	1907	multi-exon	FALSE	canonical	3	82	junction_2	10.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145136851	145178233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_145136997_145138756_145138851_145176036
Isoform_133944_16	chr4	+	5750	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	-19	-5186	2	5186	multi-exon	FALSE	canonical	3	82	junction_2	10.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGAAGTCTCTCTTTT	NA	False	NA	21	True	NA	NA	NA	145136816	145181512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_145136997_145138756_145138851_145176036
Isoform_133947_38	chr4	+	3054	5	NIC	ENSMUSG00000078503.10	novel	597	5	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	211.475028076603	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTGATTGTTTCC	913	False	NA	NA	False	NA	NA	NA	145237347	145265755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_145237496_145247375_145247456_145257381_145257486_145261385_145261513_145263160
Isoform_13395_11	chr11	-	1225	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	231	1	-3	-1	multi-exon	FALSE	canonical	3	675	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGTTCTCTTTTCTGC	7580	False	NA	-6	True	ATTAAA	-16	NA	60769867	60755278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60756175_60769538
Isoform_133950_95	chr4	+	2974	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	19	3	1	-3	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTGATTGTTTCC	913	False	NA	NA	False	NA	NA	NA	145237347	145265755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
Isoform_133957_15	chr4	+	6613	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	19	-3636	1	3636	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTGGAAAATGTGTT	913	False	NA	14	True	NA	NA	NA	145237347	145269394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
Isoform_133965_12	chr4	+	2974	4	NIC	ENSMUSG00000078503.10	novel	3044	5	NA	NA	-13	-3	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	226.592634969061	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTGATTGTTTCC	5006	False	NA	NA	False	NA	NA	NA	145241440	145265755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_145241589_145257381_145257486_145261385_145261513_145263160
Isoform_133967_15	chr4	+	2564	5	Fusion	ENSMUSG00000078502.11_ENSMUSG00000078503.10	novel	1221	3	NA	NA	-13	-1	multi-exon	FALSE	canonical	0	0	junction_4	21.5580611373101	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTTTGGTTGTTTTC	5006	False	NA	NA	False	NA	NA	NA	145241440	145351914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_145241589_145343640_145343746_145347127_145347255_145348721_145349454_145350462
Isoform_133968_11	chr4	+	2509	5	Fusion	ENSMUSG00000078502.11_ENSMUSG00000078503.10	novel	1221	3	NA	NA	-13	-5	multi-exon	TRUE	canonical	0	0	junction_4	18.4661853126194	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACAAGTTTGCTTTGG	5006	False	NA	NA	False	NA	NA	NA	145241440	145351906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_145241589_145343687_145343746_145347127_145347255_145348721_145349454_145350462
Isoform_133969_10	chr4	+	935	2	Fusion	ENSMUSG00000078503.10_ENSMUSG00000082352.2	novel	3044	5	NA	NA	16	87	multi-exon	FALSE	canonical	1	4	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAAAGCTGTGTAAGATT	5035	False	NA	13	True	AAGAAA	-9	NA	145241469	145301818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_145241589_145301002
Isoform_133972_5	chr4	+	1554	3	Genic_Genomic	ENSMUSG00000082352.2	novel	634	1	NA	NA	-9869	767	multi-exon	FALSE	non_canonical	0	0	junction_2	47	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTATTGTTGTCCT	7492	False	NA	NA	False	AGTAAA	-10	NA	145291228	145302498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_145291368_145301002_145301755_145301835
Isoform_133978_46	chr4	+	4000	5	FSM	ENSMUSG00000058186.14	ENSMUST00000105738.9	4006	5	9	-3	9	3	multi-exon	FALSE	canonical	3	18	junction_2	173.168992605489	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145397263	145431014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_145397419_145399301_145399395_145422720_145422806_145425813_145425941_145427474
Isoform_13398_478	chr11	-	3317	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	49	813	49	-813	multi-exon	FALSE	canonical	3	156	junction_2	31	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGCTCTCTGCTTTTC	6673	False	NA	-4	True	ATTAAA	-19	NA	60804589	60793884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60796948_60797707_60797827_60804454
Isoform_133980_6	chr4	+	3972	5	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	35	4	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	171.762918000365	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	145397289	145431015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_145397419_145399301_145399395_145422723_145422806_145425813_145425941_145427474
Isoform_133982_12	chr4	+	2924	5	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	83.7059585692679	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033868	146063194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_146034017_146036319_146036397_146054375_146054480_146058453_146058581_146060726
Isoform_133983_322	chr4	+	2845	4	FSM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	-46	-1	1	1	multi-exon	FALSE	canonical	3	78	junction_2	56.5115524079418	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	146033868	146063192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726
Isoform_13399_159	chr11	-	3351	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	16	812	16	-812	multi-exon	TRUE	canonical	3	156	junction_2	31	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGCTCTCTGCTTTTCT	6640	False	NA	-3	True	ATTAAA	-20	NA	60804622	60793883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60796948_60797707_60797827_60804454
Isoform_133993_44	chr4	+	4242	5	FSM	ENSMUSG00000066007.16	ENSMUST00000168483.9	4244	5	6	-4	6	-2	multi-exon	FALSE	canonical	3	31	junction_2	207.21064161862	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGACTTGGCTGTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	146093399	146135323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535
Isoform_133994_4	chr4	+	4225	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159897	182157	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	175.200837136508	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146426586	146806009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146803835_146803918_146804037_146804119
Isoform_133995_19	chr4	+	4265	6	Intergenic	novelGene_8184	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	174.614317855095	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146370063	146806009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146370163_146428065_146428160_146797298_146797381_146800390_146800518_146802050_146803555_146803650
Isoform_133996_4	chr4	+	232	2	Intergenic	novelGene_8167	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	429	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTAGAGGTATTGAAC	NA	False	NA	NA	False	NA	NA	NA	145508070	145510683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_145508210_145510590
Isoform_133999_5	chr4	+	3906	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	14	41584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	163.544506344773	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAATTATGTCCATCCGC	NA	False	NA	NA	False	NA	NA	NA	146206914	146256588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158_146255368_146255388
Isoform_134_106	ERCC-00112	+	1119	1	FSM	ERCC-00112A	DQ459422	1120	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00112_+_0_1100
Isoform_134001_8	chr4	+	3974	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	12	41583	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_5	153.60302369709	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAATTATGTCCATCCG	NA	False	NA	NA	False	NA	NA	NA	146206912	146256587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
Isoform_134004_11	chr4	+	645	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	12	38382	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	177.47957628978	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146206912	146253386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146207052_146209452_146209546_146250678_146250737_146251579_146251707_146253158
Isoform_134005_3	chr4	+	3032	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-30	40727	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	177.47957628978	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGAATCTTAATATTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	146206870	146255731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146207052_146209452_146209546_146250678_146250737_146251579_146251707_146253158
Isoform_134006_9	chr4	+	3851	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	41589	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	177.47957628978	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCCATCCGCTACGG	NA	False	NA	NA	False	NA	NA	NA	146206913	146256593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146207052_146209452_146209546_146250678_146250737_146251579_146251707_146253158
Isoform_134007_11	chr4	+	3900	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	41592	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	159.401882046606	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCATCCGCTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	146206913	146256596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146207052_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
Isoform_134013_8	chr4	+	836	4	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-12	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.482428469283	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146586471	146627265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146586602_146616526_146616611_146619877_146620005_146626770
Isoform_134015_6	chr4	+	2613	4	Fusion	ENSMUSG00000067919.9_ENSMUSG00000086147.3	novel	2295	5	NA	NA	-13	-6000	multi-exon	FALSE	canonical	3	31	junction_2	125.619354488957	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGTTACATGTGCCT	NA	False	NA	NA	False	AATAAA	-25	NA	147056419	147139251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_147056575_147058404_147058498_147115003_147115080_147136962
Isoform_13402_29	chr11	-	1257	2	FSM	ENSMUSG00000042549.11	ENSMUST00000123544.2	1291	2	-14	48	-14	-48	multi-exon	FALSE	canonical	3	28	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	60822707	60811790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_60812732_60822391
Isoform_134021_17	chr4	+	4103	6	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159941	182159	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	183.163970256161	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146426542	146806011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146803875_146804209
Isoform_134022_10	chr4	+	4416	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159919	182159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	189.146107546521	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146426564	146806011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050
Isoform_134026_6	chr4	+	2930	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-3	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	76.333151382607	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	4107	False	NA	NA	False	NA	NA	NA	147314737	147418188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_147314893_147393100_147393181_147409230_147409335_147413438_147413566_147415724
Isoform_134027_6	chr4	+	2931	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-3	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	76.333151382607	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGGTTGTTTCC	4107	False	NA	NA	False	NA	NA	NA	147314737	147418189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_147314893_147393100_147393181_147409230_147409335_147413438_147413566_147415724
Isoform_134029_20	chr4	+	7452	4	FSM	ENSMUSG00000078498.6	ENSMUST00000148762.4	2800	4	-46	-4606	-46	4606	multi-exon	FALSE	canonical	2	12	junction_1	71.5976411777806	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAAGTGCCTGGTG	NA	False	NA	12	True	NA	NA	NA	147390084	147422797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724
Isoform_134032_18	chr4	+	2717	3	NIC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	-2	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	22.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGGTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	147390084	147418189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_147390233_147409230_147409335_147415724
Isoform_134035_7	chr4	+	7334	3	NIC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-54	4607	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	22.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAAAGTGCCTGGTGT	NA	False	NA	13	True	NA	NA	NA	147390076	147422798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_147390233_147409230_147409335_147415724
Isoform_134039_3	chr4	+	808	5	NNC	ENSMUSG00000078497.10	novel	1250	5	NA	NA	-48	214	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	221.659085083378	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAGAACACAACAGAA	2321	False	NA	48	True	TTTAAA	-43	NA	147445711	147474960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_147445910_147447267_147447362_147469673_147469759_147472778_147472906_147474656
Isoform_134042_23	chr4	+	2823	6	FSM	ENSMUSG00000065999.14	ENSMUST00000081742.7	2762	6	-63	2	-1	-2	multi-exon	FALSE	canonical	3	18	junction_2	34.5913283931103	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	147637732	147669653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_147637884_147646898_147646979_147647371_147647416_147661528_147661587_147665698_147665826_147667290
Isoform_134044_33	chr4	+	2774	5	NIC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	1	-5	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	39.4104998699585	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637734	147669650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_147637884_147646898_147646979_147661528_147661587_147665698_147665826_147667290
Isoform_134045_8	chr4	+	2772	4	NIC	ENSMUSG00000065999.14	novel	552	6	NA	NA	-27	-2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	33.2498955721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	147637706	147669653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_147637884_147661481_147661587_147665698_147665826_147667290
Isoform_134046_52	chr4	+	2694	4	FSM	ENSMUSG00000065999.14	ENSMUST00000139784.8	628	4	1	-2067	1	-5	multi-exon	FALSE	canonical	3	55	junction_1	19.7540431867054	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637734	147669650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_147637884_147661528_147661587_147665698_147665826_147667290
Isoform_134048_35	chr4	+	3870	2	ISM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	0	0	0	0	intron_retention	FALSE	canonical	3	503	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025351	148031771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_148026515_148029064
Isoform_134051_1645	chr4	+	2731	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	12.5	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025351	148031771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148026515_148029064_148029919_148031057
Isoform_134052_180	chr4	+	2761	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	-30	0	-30	0	multi-exon	FALSE	canonical	3	503	junction_1	12.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025321	148031771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148026515_148029064_148029919_148031057
Isoform_134067_4	chr4	+	663	3	FSM	ENSMUSG00000029019.9	ENSMUST00000103231.5	781	3	112	6	112	-6	multi-exon	FALSE	canonical	3	7	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATTTGTGTCCGTGAG	NA	False	NA	NA	False	AATAAA	-24	NA	148070356	148071656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148070559_148070752_148070976_148071418
Isoform_134068_11	chr4	+	2654	12	FSM	ENSMUSG00000029009.18	ENSMUST00000097788.11	2652	12	-2	0	-2	0	multi-exon	FALSE	canonical	3	10	junction_1	31.6729151439997	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGAGGCTTGCTCTTG	NA	False	NA	18	True	AAGAAA	-32	NA	148123531	148140663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148123590_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_134069_3	chr4	+	5999	12	FSM	ENSMUSG00000029009.18	ENSMUST00000097788.11	2652	12	-3	-3344	-3	-1	multi-exon	FALSE	canonical	3	10	junction_1	31.6729151439997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTTTTTAAATGCTT	NA	False	NA	16	True	ATTAAA	-20	NA	148123530	148144007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148123590_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_134070_5	chr4	+	3435	11	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	10	junction_1	31.903134642226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGAGGCTTGCTCTTG	NA	False	NA	18	True	AAGAAA	-32	NA	148123530	148140663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_148123590_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_134071_5	chr4	+	3464	3	ISM	ENSMUSG00000029009.18	ENSMUST00000141283.8	847	4	-16	-1821	-16	1821	intron_retention	FALSE	canonical	3	54	junction_1	27	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148123599	148130832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_148123867_148126040_148126287_148127881
Isoform_134074_52	chr4	+	2891	12	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	41	3	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	21.8151513046846	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGGCTTGCTCTTGGCC	NA	False	NA	21	True	AAGAAA	-35	NA	148123574	148140666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_134075_22	chr4	+	6231	12	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	41	1	intron_retention	FALSE	canonical	3	54	junction_1	21.8151513046846	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTTTTTAAATGCT	NA	False	NA	15	True	ATTAAA	-19	NA	148123574	148144006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_134077_3	chr4	+	6944	11	NIC	ENSMUSG00000029009.18	novel	2104	6	NA	NA	26	1	intron_retention	FALSE	canonical	3	54	junction_1	20.2852162916741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTTTTTAAATGCT	NA	False	NA	15	True	ATTAAA	-19	NA	148123641	148144006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_134081_30	chr4	+	1255	10	FSM	ENSMUSG00000029003.12	ENSMUST00000084129.9	1162	10	-95	2	-95	1	multi-exon	FALSE	canonical	3	16	junction_1	269.730638385688	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGATGAACATGTGTAT	NA	False	NA	28	True	AATAAA	-36	NA	148215276	148230154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148215424_148224299_148224478_148225241_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
Isoform_134085_331	chr4	+	1167	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	352	16	-190	-13	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCATTAACCAAACAGG	NA	False	NA	14	True	AATAAA	-22	NA	148224990	148230140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
Isoform_134087_689	chr4	+	1004	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	529	2	-13	1	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGATGAACATGTGTAT	NA	False	NA	28	True	AATAAA	-36	NA	148225167	148230154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
Isoform_134089_70	chr4	+	973	8	FSM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	-37	13	-18	-13	multi-exon	FALSE	canonical	3	65	junction_6	213.795439137317	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCATTAACCAAACAGG	NA	False	NA	14	True	AATAAA	-22	NA	148225162	148230140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
Isoform_134097_105	chr4	+	1279	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	1	8	1	-8	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGGACGCACAGATGAA	NA	False	NA	15	True	NA	NA	NA	148245078	148250873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
Isoform_134099_10	chr4	+	1367	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	-87	8	-87	-8	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGGACGCACAGATGAA	NA	False	NA	15	True	NA	NA	NA	148244990	148250873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
Isoform_134100_86	chr4	+	1037	5	FSM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	-35	1	-21	-1	multi-exon	FALSE	canonical	3	142	junction_1	19.0656759649376	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGGCCTCTGACTATG	NA	False	NA	15	True	AATAAA	-21	NA	148533046	148539429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008
Isoform_134101_89	chr4	+	8581	58	FSM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	-17	0	-17	0	multi-exon	TRUE	canonical	2	74	junction_19	24.6853638803358	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGACTGGCTT	NA	False	NA	34	True	AATAAA	-23	NA	148533050	148642140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
Isoform_13411_437	chr11	-	4403	13	FSM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	28	3	2	-3	multi-exon	FALSE	canonical	3	276	junction_4	25.4114748795806	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGACTCTCTGCCTCA	NA	False	NA	-7	True	AATAAA	-17	NA	61065853	61042613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
Isoform_134113_30	chr4	+	2998	18	ISM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	-3	5590	-3	198	5prime_fragment	FALSE	canonical	3	466	junction_4	46.038196868842	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTGTATATGTGTAT	NA	False	NA	12	True	AATAAA	-22	NA	148642915	148661268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265
Isoform_134117_30	chr4	+	2755	19	ISM	ENSMUSG00000017264.17	ENSMUST00000173154.8	2773	25	26	5579	2	198	5prime_fragment	FALSE	canonical	3	466	junction_4	45.4584670025532	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTGTATATGTGTAT	NA	False	NA	12	True	AATAAA	-22	NA	148642913	148661268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606
Isoform_134120_1632	chr4	+	2755	25	FSM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	30	5	-3	3	multi-exon	FALSE	canonical	3	466	junction_4	49.4747234847138	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGATGGTTCTTGGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	148642915	148666853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
Isoform_134121_23	chr4	+	2756	25	FSM	ENSMUSG00000017264.17	ENSMUST00000173154.8	2773	25	21	-4	-3	1	multi-exon	TRUE	canonical	2	11	junction_23	124.10724948608	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAAGATGGTTCTTGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	148642908	148666851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666218_148666292_148666740
Isoform_134123_57	chr4	+	2680	24	FSM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	-3	5	-3	3	multi-exon	FALSE	canonical	3	22	junction_18	124.035058157659	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGATGGTTCTTGGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	148642915	148666853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
Isoform_134134_97	chr4	+	1399	6	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	1	19	1	-19	intron_retention	FALSE	canonical	3	3092	junction_5	102.267101259398	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTCATGACCTCTGAC	8717	False	NA	9	True	AATACA	-17	NA	148675960	148679057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539
Isoform_134135_3478	chr4	+	1323	7	FSM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	0	15	0	-15	multi-exon	FALSE	canonical	3	3072	junction_6	112.657297440808	3478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGACCTCTGACCTTT	8716	False	NA	13	True	AATACA	-21	NA	148675959	148679061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
Isoform_134155_7	chr4	+	744	5	FSM	ENSMUSG00000028979.18	ENSMUST00000105701.9	738	5	-4	-2	-4	2	multi-exon	FALSE	canonical	2	14	junction_1	7.49583217528247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTGTGTGTCTCTTG	NA	False	NA	7	True	AATAAA	-17	NA	148687006	148688876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_148687048_148687124_148687354_148687448_148687627_148688143_148688276_148688712
Isoform_134156_6	chr4	+	4190	11	ISM	ENSMUSG00000028977.18	ENSMUST00000094464.10	4349	16	2	4617	2	1	5prime_fragment	FALSE	canonical	1	2	junction_1	4.17612260356422	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTGTAAGCTGTAGTG	NA	False	NA	NA	False	AATAAA	-24	NA	148888887	149024969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_148888972_148922722_148922878_148974778_148974834_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931
Isoform_134160_6	chr4	+	4291	5	ISM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	141413	0	-1160	0	3prime_fragment	FALSE	canonical	2	3	junction_3	1.87082869338697	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACGTTATCTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	149030298	149039346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_149030679_149031446_149031619_149032980_149033133_149033249_149033392_149035901
Isoform_134163_30	chr4	+	1787	5	FSM	ENSMUSG00000028974.14	ENSMUST00000103216.10	1835	5	36	12	36	-12	multi-exon	FALSE	canonical	3	30	junction_2	2.34520787991171	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCGAAAAAACCAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	149188638	149203315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228
Isoform_134165_3	chr4	+	3589	5	FSM	ENSMUSG00000028974.14	ENSMUST00000103216.10	1835	5	25	-1779	25	2	multi-exon	FALSE	canonical	3	30	junction_2	2.34520787991171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTTTGTTTGTCAG	NA	False	NA	8	True	AATAAA	-18	NA	149188627	149205106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228
Isoform_134166_83	chr4	+	2434	6	FSM	ENSMUSG00000028974.14	ENSMUST00000030816.4	2457	6	25	-2	25	2	multi-exon	FALSE	canonical	3	30	junction_2	2.13541565040626	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTTTGTTTGTCAG	NA	False	NA	8	True	AATAAA	-18	NA	149188627	149205106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
Isoform_134167_55	chr4	+	1283	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTGTCTATGAAAATT	NA	False	NA	25	True	NA	NA	NA	149569698	149581123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_134168_4	chr4	+	4531	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-22	3211	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGTCTGATTGCAGT	NA	False	NA	20	True	AATAAA	-21	NA	149569663	149584336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_134169_12	chr4	+	1298	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	61.9861735735133	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTGTCTATGAAAATT	NA	False	NA	25	True	NA	NA	NA	149569679	149581123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_149569731_149570318_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_134171_24	chr4	+	1575	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	27	-4	intron_retention	FALSE	canonical	3	32	junction_1	58.2405287035881	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTGGTGTCTATGAAAA	NA	False	NA	23	True	NA	NA	NA	149569723	149581121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_149570050_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_134172_6	chr4	+	1572	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	27	-3	intron_retention	FALSE	canonical	2	11	junction_1	65.4017412237781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGTGTCTATGAAAAT	NA	False	NA	24	True	NA	NA	NA	149569723	149581122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_149570050_149570318_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_134173_89	chr4	+	1835	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-20	2	-20	-2	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTGTCTATGAAAATT	NA	False	NA	25	True	NA	NA	NA	149569730	149581123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_134176_5	chr4	+	3691	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-26	-1848	-26	1848	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATATGTGTTGAATTCC	NA	False	NA	NA	False	NA	NA	NA	149569724	149582973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_134177_3	chr4	+	5056	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-29	-3210	25	3210	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTGTCTGATTGCAG	NA	False	NA	19	True	AATAAA	-20	NA	149569721	149584335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_134179_119	chr4	+	2754	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	-81	1	-81	-1	multi-exon	FALSE	canonical	3	188	junction_2	7.98044484975618	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGAGCTGAGCTGG	NA	False	NA	8	True	AATAAA	-15	NA	149602611	149650893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
Isoform_134184_44	chr4	+	4484	19	FSM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	-166	-999	4	-1	multi-exon	FALSE	canonical	3	19	junction_2	165.993641109799	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670928	149733355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
Isoform_134189_866	chr4	+	4416	19	NNC	ENSMUSG00000039953.14	novel	3319	19	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	364	junction_18	62.7946879879674	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670939	149733355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829_149733144_149733170
Isoform_134193_15	chr4	+	4490	19	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	364	junction_18	62.7946879879674	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670866	149733356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829_149733144_149733170
Isoform_134198_85	chr4	+	4397	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	127.641037190239	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670928	149733355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
Isoform_13421_32	chr11	-	3164	11	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	38.2758409443868	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTGTGTGTTAATTTT	1371	False	NA	NA	False	AATAAA	-12	NA	61157973	61135680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61137148_61138754_61138868_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
Isoform_13422_6	chr11	-	4012	10	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	15	3	intron_retention	FALSE	canonical	3	23	junction_1	28.0994705806636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTAATTTTGACCT	1348	False	NA	NA	False	AATAAA	-17	NA	61157996	61135675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61137148_61138754_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
Isoform_134236_4	chr4	+	3018	4	FSM	ENSMUSG00000047875.7	ENSMUST00000094451.4	4900	4	240	1642	240	-1642	multi-exon	FALSE	canonical	2	6	junction_2	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGGAAATGATGTTGGAT	NA	False	NA	NA	False	AATAAA	-14	NA	150172061	150188742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_150172594_150183214_150183429_150186036_150186235_150186668
Isoform_134238_3	chr4	+	2817	13	NIC	ENSMUSG00000028976.11	novel	3158	14	NA	NA	29	-416	intron_retention	FALSE	canonical	1	2	junction_6	1.53432938662683	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAAGACATAGCAGTTC	5654	False	NA	NA	False	AATAAA	-18	NA	150203768	150228210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_150204506_150205140_150205223_150210046_150210146_150210582_150210744_150213499_150213625_150220000_150220154_150223877_150224004_150224087_150224276_150224386_150224498_150225215_150225318_150226634_150226711_150227256_150227385_150227481
Isoform_13424_5	chr11	-	2720	7	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	4477	2	-373	-2	3prime_fragment	FALSE	canonical	3	69	junction_1	17.2787602435926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTGTGTGTTAATTTT	5810	False	NA	NA	False	AATAAA	-12	NA	61153534	61135680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044
Isoform_134241_5	chr4	+	1763	7	ISM	ENSMUSG00000062064.7	ENSMUST00000059893.8	1578	12	8857	-557	1	557	3prime_fragment	FALSE	canonical	3	15	junction_6	2.35702260395516	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCTCGGCTCCAGCCCA	1363	False	NA	NA	False	NA	NA	NA	150242285	150253496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_150242665_150242931_150243123_150244475_150244587_150247654_150247757_150249565_150249642_150250811_150250940_150252720
Isoform_134246_1810	chr4	+	1763	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	256	8	-32	-2	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	1810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGTGTGCTGGGCATCT	NA	False	NA	-3	True	AATAAA	-14	NA	150321664	150333328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
Isoform_134248_21	chr4	+	1996	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	24	7	24	-1	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321432	150333329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
Isoform_13425_286	chr11	-	3051	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	38	2	-20	-2	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTGTGTGTTAATTTT	1371	False	NA	NA	False	AATAAA	-12	NA	61157973	61135680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
Isoform_134271_11	chr4	+	7833	23	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-105	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_19	29.5377962102571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150365997	150706420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
Isoform_134274_25	chr4	+	7826	23	FSM	ENSMUSG00000039852.18	ENSMUST00000105682.9	7728	23	-98	0	-98	0	multi-exon	FALSE	canonical	3	64	junction_3	25.3224249749421	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150366004	150706423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
Isoform_134276_7	chr4	+	7658	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	30.0910937471953	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCTGTGTGTTGGCCA	NA	False	NA	15	True	AATAAA	-16	NA	150366045	150706419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
Isoform_134278_7	chr4	+	7702	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-103	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_3	25.5941638755752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150365999	150706420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
Isoform_13428_5	chr11	-	3078	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	112	-99	54	99	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGTTGTCATGCTTTT	1445	False	NA	NA	False	NA	NA	NA	61157899	61135579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
Isoform_134280_10	chr4	+	6075	13	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	37.0730322771448	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150654019	150706420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
Isoform_134281_22	chr4	+	6077	13	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	28.7347785792757	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150654017	150706423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
Isoform_134292_485	chr4	+	3043	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	1	-1	1	1	multi-exon	FALSE	canonical	3	303	junction_2	19.3275853524323	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTGTCTTGTCTAAAC	3782	False	NA	NA	False	AATAAA	-29	NA	150939530	150953345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
Isoform_134299_2312	chr4	+	2189	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	46	916	-2	-1	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGGTTTGGAAACTAG	9116	False	NA	27	True	TATAAA	-19	NA	152018193	152065678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
Isoform_134300_805	chr4	+	2923	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	46	182	-2	-182	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTCTGTCCATCTGT	9116	False	NA	18	True	NA	NA	NA	152018193	152066412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
Isoform_134301_243	chr4	+	2253	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	-18	916	-18	-1	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGGTTTGGAAACTAG	9052	False	NA	27	True	TATAAA	-19	NA	152018129	152065678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
Isoform_134302_72	chr4	+	2969	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	0	182	0	-182	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTCTGTCCATCTGT	9070	False	NA	18	True	NA	NA	NA	152018147	152066412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
Isoform_13432_4	chr11	-	2008	13	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5531	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	6.20651539378848	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTGTGCTGAGAATA	NA	False	NA	NA	False	AATAAA	-12	NA	61227879	61192457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61203684_61204469_61204584_61216622_61216721_61219353_61219452_61220586_61220632_61227640
Isoform_134324_20	chr4	+	3922	4	FSM	ENSMUSG00000073700.4	ENSMUST00000097773.4	3986	4	63	1	63	-1	multi-exon	FALSE	canonical	3	100	junction_1	3.39934634239519	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGTGTCATGGCCTT	6461	False	NA	12	True	AATAAA	-12	NA	152093322	152102136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791
Isoform_134326_4	chr4	+	3776	6	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	134	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.3435487671041	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGTGTCATGGCCTT	6532	False	NA	12	True	AATAAA	-12	NA	152093393	152102136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101314_152101364_152101489_152101512
Isoform_13433_21	chr11	-	1962	12	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5532	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	5.65393156562408	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTGTGCTGAGAATA	NA	False	NA	NA	False	AATAAA	-12	NA	61227878	61192457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61203684_61204469_61204584_61216622_61216721_61219353_61219452_61227640
Isoform_134333_1886	chr4	+	3724	12	FSM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	12	-14	3	-4	multi-exon	FALSE	canonical	3	617	junction_5	39.8725241465621	1886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGATTGTGAATACAGCT	7357	False	NA	NA	False	NA	NA	NA	152123795	152144495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
Isoform_13434_5	chr11	-	2749	11	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5531	-1	intron_retention	FALSE	canonical	2	5	junction_8	5.89915248150105	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTGTGCTGAGAATA	NA	False	NA	NA	False	AATAAA	-12	NA	61227879	61192457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61204584_61216622_61216721_61219353_61219452_61227640
Isoform_134341_35	chr4	+	3615	11	FSM	ENSMUSG00000028948.17	ENSMUST00000131696.3	3616	11	-16	17	11	1	multi-exon	FALSE	canonical	3	23	junction_4	202.328841246126	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATAATAACAAAGAT	7365	False	NA	NA	False	NA	NA	NA	152123803	152144482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
Isoform_134358_26	chr4	+	4095	21	ISM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-12	-4	-12	0	intron_retention	FALSE	canonical	3	104	junction_1	15.0860863049367	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTCATGCGCTTCTG	NA	False	NA	32	True	TATAAA	-21	NA	152171302	152199851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
Isoform_134359_473	chr4	+	3809	22	FSM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	9	0	9	0	multi-exon	FALSE	canonical	3	104	junction_1	15.0256017344728	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	False	NA	28	True	TATAAA	-17	NA	152171323	152199847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_13436_16	chr11	-	2662	17	FSM	ENSMUSG00000010122.15	ENSMUST00000010267.10	2639	17	-26	3	-26	-2	multi-exon	FALSE	canonical	2	6	junction_16	9.25675429078681	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGGGCTGTAGATTA	NA	False	NA	-4	True	ATTAAA	-15	NA	61268933	61234229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254219_61254318_61258498_61258544_61260076_61260120_61260943_61261093_61262581_61262651_61264180_61264283_61268738
Isoform_134361_19	chr4	+	3912	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-18	0	intron_retention	FALSE	canonical	3	104	junction_1	15.3631865184277	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTCATGCGCTTCTG	NA	False	NA	32	True	TATAAA	-21	NA	152171296	152199851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_134362_6	chr4	+	3771	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	34.9383385409209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGAGTCATGCGCTTC	NA	False	NA	30	True	TATAAA	-19	NA	152171312	152199849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_134363_19	chr4	+	4274	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	104	junction_1	14.6574213284602	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	25	True	TATAAA	-14	NA	152171311	152199844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_134376_684	chr4	+	1368	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	85	4	85	1	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGAAGCCTAGGTGGTC	NA	False	NA	13	True	AATAAA	-18	NA	152262675	152356305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
Isoform_134377_18	chr4	+	1764	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	-312	5	-312	0	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAAGCCTAGGTGGT	NA	False	NA	12	True	AATAAA	-17	NA	152262278	152356304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
Isoform_134378_24	chr4	+	1600	9	FSM	ENSMUSG00000028937.15	ENSMUST00000167926.8	1505	9	-96	1	-96	-1	multi-exon	FALSE	canonical	3	33	junction_1	152.008172066504	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTAGGTGGTCATTTGT	NA	False	NA	19	True	AATAAA	-24	NA	152270494	152356311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
Isoform_13438_3	chr11	-	2047	11	NNC	ENSMUSG00000010122.15	novel	2639	17	NA	NA	2049	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	8.3282651254628	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTGTAGATTATTAT	NA	False	NA	0	True	ATTAAA	-19	NA	61254429	61234225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254347
Isoform_134385_38	chr4	+	4967	6	FSM	ENSMUSG00000039662.17	ENSMUST00000151372.8	4950	6	-14	-3	-14	2	multi-exon	FALSE	canonical	3	25	junction_2	50.2274825170444	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTCCTGTATCAGGT	4598	False	NA	5	True	AATAAA	-20	NA	152381746	152391580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152382026_152383141_152383231_152383593_152383703_152384127_152384298_152384993_152385212_152387478
Isoform_134388_189	chr4	+	4866	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	56	-3	-21	3	multi-exon	FALSE	canonical	3	97	junction_2	16.0370664399696	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTCCTGTATCAGGTG	4591	False	NA	6	True	AATAAA	-21	NA	152381739	152391581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
Isoform_134389_42	chr4	+	4932	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	-11	-2	-11	2	multi-exon	FALSE	canonical	3	97	junction_2	16.0370664399696	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTCCTGTATCAGGT	4524	False	NA	5	True	AATAAA	-20	NA	152381672	152391580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
Isoform_134397_235	chr4	+	2060	4	FSM	ENSMUSG00000028936.16	ENSMUST00000139685.8	2051	4	-6	-3	-6	3	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGCAAGGCTTTTTT	NA	False	NA	32	True	ATTAAA	-22	NA	152410317	152418531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
Isoform_134398_2160	chr4	+	463	4	FSM	ENSMUSG00000028936.16	ENSMUST00000103191.11	474	4	8	3	-6	1	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	2160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGGTGGTTTATCCTTG	NA	False	NA	13	True	AATAAA	-12	NA	152410317	152416934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
Isoform_134400_53	chr4	+	616	4	FSM	ENSMUSG00000028936.16	ENSMUST00000142735.8	581	4	-34	-1	-34	1	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGGTGGTTTATCCTTG	NA	False	NA	13	True	AATAAA	-12	NA	152410164	152416934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
Isoform_134401_60	chr4	+	531	4	FSM	ENSMUSG00000028936.16	ENSMUST00000142735.8	581	4	51	-1	51	1	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGGTGGTTTATCCTTG	NA	False	NA	13	True	AATAAA	-12	NA	152410249	152416934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
Isoform_134417_24	chr4	+	1571	3	ISM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	18	6	0	1	intron_retention	FALSE	canonical	3	743	junction_1	52	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATACTGTGTTCACAA	NA	False	NA	NA	False	AATAAA	-23	NA	154041711	154046376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_154041780_154044205_154044320_154044987
Isoform_134418_773	chr4	+	1074	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	18	6	0	1	multi-exon	FALSE	canonical	3	743	junction_1	42.5519290592879	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATACTGTGTTCACAA	NA	False	NA	NA	False	AATAAA	-23	NA	154041711	154046376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
Isoform_134422_97	chr4	+	1065	4	FSM	ENSMUSG00000047613.11	ENSMUST00000147826.2	940	4	-11	-114	0	-1	multi-exon	FALSE	canonical	3	119	junction_1	332.870345129551	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAATACTGTGTTCAC	NA	False	NA	NA	False	AATAAA	-21	NA	154041711	154046374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154041780_154044212_154044320_154044987_154045450_154045946
Isoform_134424_19	chr4	+	946	3	FSM	ENSMUSG00000047613.11	ENSMUST00000105645.9	977	3	21	10	3	-10	multi-exon	FALSE	canonical	3	25	junction_1	388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACTTTTAAAGAAATAC	NA	False	NA	NA	False	AATAAA	-12	NA	154041714	154046365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154041780_154044987_154045450_154045946
Isoform_134428_7	chr4	+	2626	12	ISM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	11	18246	11	410	5prime_fragment	FALSE	canonical	3	75	junction_10	10.7963875194935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAAATTCCA	NA	False	NA	NA	False	NA	NA	NA	154059661	154074943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231
Isoform_134434_92	chr4	+	3615	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	22	1514	22	-1514	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGCTATTCTAAGAG	NA	False	NA	NA	False	AATAAA	-13	NA	154059672	154091675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
Isoform_134436_56	chr4	+	5132	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	19	0	19	0	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTCACTTTTATTA	NA	False	NA	13	True	AGTAAA	-10	NA	154059669	154093189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
Isoform_134438_7	chr4	+	3697	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-61	1515	-61	-1515	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAGCTATTCTAAGA	NA	False	NA	NA	False	AATAAA	-12	NA	154059589	154091674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
Isoform_134439_7	chr4	+	5254	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-81	-22	-81	22	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTAGCCTGGCTTTGC	NA	False	NA	35	True	AGTAAA	-32	NA	154059569	154093211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
Isoform_134443_997	chr4	+	3380	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-15	-1	at_least_one_novel_splicesite	TRUE	canonical	3	350	junction_6	35.2194287753976	997	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTGCATCAGCAGCCT	NA	False	NA	14	True	AATAAA	-16	NA	154096244	154105968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104364_154104392
Isoform_134444_87	chr4	+	2520	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	4	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	149.446598202454	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGAGTGTAATCTTCT	NA	False	NA	43	True	AATAGA	-44	NA	154096263	154105127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104674_154104702
Isoform_134458_4	chr4	+	3172	9	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	0	-1	0	1	intron_retention	FALSE	canonical	3	51	junction_4	7.24568837309472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACAGTGGTGGTTGTTTT	NA	False	NA	26	True	TATAAA	-31	NA	154226828	154241274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991
Isoform_134459_7	chr4	+	1801	11	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	37	-1	0	1	intron_retention	FALSE	canonical	3	51	junction_4	7.11407056473296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACAGTGGTGGTTGTTTT	NA	False	NA	26	True	TATAAA	-31	NA	154226865	154241274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557
Isoform_13446_18	chr11	-	2983	7	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-26	-8	intron_retention	FALSE	canonical	3	13	junction_4	77.5234731477434	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGACTCTGCGTCATT	NA	False	NA	-7	True	AATACA	-11	NA	61385040	61379645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383675_61383896_61384472_61384781_61384905
Isoform_134460_112	chr4	+	1565	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	37	-4	0	4	multi-exon	FALSE	canonical	3	51	junction_4	6.78354840224641	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGGTGGTTGTTTTCTT	NA	False	NA	29	True	TATAAA	-34	NA	154226865	154241277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
Isoform_134462_9	chr4	+	2366	2	FSM	ENSMUSG00000084987.2	ENSMUST00000144347.2	387	2	-8	-1971	-8	1971	multi-exon	FALSE	canonical	2	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTCCTGTGTGTCTC	2918	False	NA	NA	False	NA	NA	NA	154685645	154690630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154685865_154688483
Isoform_134463_16	chr4	+	2254	2	FSM	ENSMUSG00000084987.2	ENSMUST00000144347.2	387	2	104	-1971	-14	1971	multi-exon	FALSE	canonical	2	6	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTCCTGTGTGTCTC	3030	False	NA	NA	False	NA	NA	NA	154685757	154690630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_154685865_154688483
Isoform_134464_3	chr4	+	2437	21	NNC	ENSMUSG00000058183.15	novel	2935	24	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3.36303434416005	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGACTTTGTTTTGTAC	1607	False	NA	4	True	AGTAAA	-8	NA	154966693	154979979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_154966787_154967629_154967792_154968080_154968162_154969402_154969499_154969960_154970080_154970607_154970674_154972083_154972219_154972293_154972383_154973963_154974101_154974384_154974479_154975295_154975425_154975937_154976037_154976400_154976485_154976872_154976977_154977280_154977340_154977688_154977809_154978287_154978422_154978531_154978598_154979053_154979150_154979417_154979495_154979582
Isoform_134465_4	chr4	+	2135	17	NIC	ENSMUSG00000058183.15	novel	2935	24	NA	NA	2585	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	3.15980616494113	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGACTTTGTTTTGTAC	4164	False	NA	4	True	AGTAAA	-8	NA	154969250	154979979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_154969499_154970607_154970674_154972083_154972219_154972293_154972384_154973963_154974101_154974384_154974479_154975295_154975425_154975937_154976037_154976400_154976485_154976872_154976977_154977280_154977340_154977688_154977809_154978287_154978422_154978531_154978598_154979053_154979150_154979417_154979495_154979582
Isoform_134466_140	chr4	+	2561	19	FSM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	14	-67	4	0	multi-exon	FALSE	canonical	3	88	junction_8	27.1993100856585	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048593	155065395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
Isoform_134467_3	chr4	+	3028	18	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	0	1	intron_retention	FALSE	canonical	3	88	junction_8	27.811899074026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGGTGAGAAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	155048589	155065392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155064050_155064182_155064252_155064951
Isoform_134468_22	chr4	+	2526	19	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	31.6079377434698	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048593	155065394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
Isoform_134469_12	chr4	+	2569	19	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	40.9866358827808	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048590	155065395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
Isoform_134470_7	chr4	+	4621	19	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	51.8019733643849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGCAGTGTCTAGCAC	NA	False	NA	NA	False	NA	NA	NA	155048580	155065400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155057628_155057650_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
Isoform_134471_4	chr4	+	4857	17	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	107	junction_13	22.2541253198143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCTGGTGAGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	155048590	155065390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
Isoform_134472_8	chr4	+	4796	18	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	44.8643476335198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCATCTGGTGAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	155048593	155065389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155057628_155057650_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
Isoform_134473_106	chr4	+	1563	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	35	90	-3	-90	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAATAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	155151507	155156800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
Isoform_134475_18	chr4	+	1632	14	FSM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	24	3	-2	-3	multi-exon	FALSE	canonical	3	16	junction_9	6.41927570616156	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAGTAGCACCTTTTGT	NA	False	NA	14	True	AATAAA	-15	NA	155171057	155229959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
Isoform_134476_4	chr4	+	1820	14	FSM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	-166	5	-166	-5	multi-exon	TRUE	canonical	3	16	junction_9	6.41927570616156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTAGCACCTTTT	NA	False	NA	12	True	AATAAA	-13	NA	155170867	155229957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
Isoform_134477_4	chr4	+	1519	13	NNC	ENSMUSG00000029049.15	novel	1659	14	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	11.3023473471468	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCCTGAGTAGCACCTT	NA	False	NA	10	True	AATAAA	-11	NA	155171054	155229955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_155171139_155171877_155171950_155173942_155174042_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226902_155229623
Isoform_134478_125	chr4	+	1045	4	FSM	ENSMUSG00000073684.14	ENSMUST00000178473.8	1076	4	28	3	5	0	multi-exon	FALSE	canonical	3	113	junction_1	46.5784881201135	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	5	True	NA	NA	NA	155334450	155341141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155334520_155334962_155335108_155335212_155335494_155340591
Isoform_134479_12	chr4	+	1010	4	FSM	ENSMUSG00000073684.14	ENSMUST00000105627.8	710	4	1	-301	1	0	multi-exon	FALSE	canonical	2	17	junction_1	91.7617688485909	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	5	True	NA	NA	NA	155334446	155341141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155334520_155335001_155335108_155335212_155335494_155340591
Isoform_13448_12	chr11	-	3665	5	ISM	ENSMUSG00000001034.18	ENSMUST00000152755.8	3255	6	19	7	19	-7	intron_retention	FALSE	canonical	3	217	junction_3	15.1224171348366	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385073	61379644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729
Isoform_134480_6	chr4	+	1492	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	-13	0	1	0	multi-exon	FALSE	canonical	3	207	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	5	True	NA	NA	NA	155334446	155341141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155335108_155335212_155335494_155340591
Isoform_134481_63	chr4	+	1381	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	98	0	98	0	multi-exon	FALSE	canonical	3	207	junction_2	4.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	5	True	NA	NA	NA	155334557	155341141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155335108_155335212_155335494_155340591
Isoform_134484_18	chr4	+	2370	5	FSM	ENSMUSG00000078490.11	ENSMUST00000123952.9	2365	5	-6	1	-6	-1	multi-exon	FALSE	canonical	2	6	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTTGCG	2326	False	NA	NA	False	NA	NA	NA	155493708	155506448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155494028_155500136_155500223_155503076_155503153_155503303_155503448_155504703
Isoform_134489_225	chr4	+	3121	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	18	4	9	-2	multi-exon	FALSE	canonical	3	731	junction_11	1088.68406424249	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTCTGGTGTGATGGTT	NA	False	NA	23	True	AATAAA	-15	NA	155575835	155643722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
Isoform_13449_6	chr11	-	3235	6	FSM	ENSMUSG00000001034.18	ENSMUST00000152755.8	3255	6	14	6	14	-6	multi-exon	FALSE	canonical	3	31	junction_5	83.0093970584054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385078	61379643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384331
Isoform_134496_971	chr4	+	3122	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	9	0	9	0	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575835	155643726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
Isoform_13450_32	chr11	-	3073	7	NIC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	-27	-6	intron_retention	FALSE	canonical	3	31	junction_5	75.7840499196382	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385041	61379643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384331_61384781_61384905
Isoform_134516_351	chr4	+	3079	11	NIC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	731	junction_10	1033.79389145032	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGTGTGATGGTTAT	NA	False	NA	25	True	AATAAA	-17	NA	155575830	155643724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
Isoform_13452_30	chr11	-	3065	7	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	-37	-6	intron_retention	FALSE	canonical	3	42	junction_5	71.8410668690888	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385051	61379643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384349_61384781_61384905
Isoform_134521_1147	chr4	+	3072	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	15	1	9	1	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTGTGATGGTTATT	NA	False	NA	26	True	AATAAA	-18	NA	155575835	155643725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
Isoform_13454_25	chr11	-	2990	7	FSM	ENSMUSG00000001034.18	ENSMUST00000108714.2	3069	7	72	7	-36	-7	multi-exon	FALSE	canonical	3	31	junction_5	75.7840499196382	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385050	61379644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384422_61384781_61384905
Isoform_13456_18	chr11	-	3097	6	ISM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	40	7	10	-7	intron_retention	FALSE	canonical	3	175	junction_5	27.8107892732299	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385082	61379644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472
Isoform_134570_35	chr4	+	3633	11	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	143	11	1	-7	intron_retention	FALSE	canonical	3	675	junction_7	31.7464958696232	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGAGTTAAGTAA	9715	False	NA	27	True	AATAAA	-13	NA	155648299	155675447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066
Isoform_134571_1661	chr4	+	2998	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	143	11	1	-7	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGAGTTAAGTAA	9715	False	NA	27	True	AATAAA	-13	NA	155648299	155675447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
Isoform_134578_81	chr4	+	2868	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	206.213699835874	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGAGTTAAGTAA	9687	False	NA	27	True	AATAAA	-13	NA	155648271	155675447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155673784
Isoform_134581_76	chr4	+	2793	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	208.120662116956	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGAGTTAAGTAA	9715	False	NA	27	True	AATAAA	-13	NA	155648299	155675447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
Isoform_13459_234	chr11	-	2931	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	82	6	-26	-6	multi-exon	FALSE	canonical	3	175	junction_5	27.9861076647365	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385040	61379643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
Isoform_134594_4	chr4	+	2241	9	FSM	ENSMUSG00000042202.16	ENSMUST00000118607.2	2166	9	-74	-1	-74	1	multi-exon	FALSE	canonical	2	8	junction_6	4.43705983732471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGATGGTCTGGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	155686326	155703777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155686620_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968
Isoform_134595_4	chr4	+	2971	9	FSM	ENSMUSG00000042202.16	ENSMUST00000118607.2	2166	9	-30	-775	-30	4	multi-exon	FALSE	canonical	2	8	junction_6	4.43705983732471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGACGTTGGATTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	155686370	155704551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155686620_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968
Isoform_134597_17	chr4	+	2768	22	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	155.880092297263	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGTCTAACTTGCCT	3986	False	NA	18	True	ATTAAA	-23	NA	155709349	155734390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155709399_155709641_155709797_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
Isoform_134599_17	chr4	+	2721	21	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	136.859882726824	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGTCTAACTTGCCT	3986	False	NA	18	True	ATTAAA	-23	NA	155709349	155734390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155709399_155709641_155709797_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
Isoform_13460_125	chr11	-	2974	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	40	5	10	-5	multi-exon	FALSE	canonical	3	175	junction_5	27.9861076647365	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	-4	True	AATACA	-14	NA	61385082	61379642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
Isoform_134600_11	chr4	+	2838	21	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	10	-7	intron_retention	FALSE	canonical	3	40	junction_1	141.147538058586	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGTGTCTAACTTGC	3986	False	NA	16	True	ATTAAA	-21	NA	155709349	155734388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155709399_155709641_155709797_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
Isoform_134604_86	chr4	+	2612	21	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	10	-6	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.97994438695	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3986	False	NA	17	True	ATTAAA	-22	NA	155709349	155734389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155709399_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
Isoform_134611_307	chr4	+	2565	20	FSM	ENSMUSG00000029062.15	ENSMUST00000067081.10	2595	20	24	6	10	-6	multi-exon	FALSE	canonical	3	247	junction_2	74.7943440763884	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3986	False	NA	17	True	ATTAAA	-22	NA	155709349	155734389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
Isoform_134616_79	chr4	+	2684	20	FSM	ENSMUSG00000029062.15	ENSMUST00000105598.2	2673	20	-17	6	10	-6	multi-exon	FALSE	canonical	3	183	junction_2	84.1228490935262	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3986	False	NA	17	True	ATTAAA	-22	NA	155709349	155734389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
Isoform_134618_14	chr4	+	2517	20	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	-5	-6	combination_of_known_splicesites	TRUE	canonical	3	20	junction_1	123.771570491975	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3957	False	NA	17	True	ATTAAA	-22	NA	155709320	155734389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155709399_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
Isoform_134621_7	chr4	+	2937	20	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	10	-5	intron_retention	FALSE	canonical	3	58	junction_1	111.45519453041	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGTCTAACTTGCCT	4013	False	NA	18	True	ATTAAA	-23	NA	155709376	155734390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155709797_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
Isoform_134640_73	chr4	+	828	4	FSM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	-18	64	-7	-64	multi-exon	FALSE	canonical	3	1675	junction_1	40.2685430026411	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACATCCTGGTCAA	NA	False	NA	NA	False	AATAAA	-24	NA	155789573	155816582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383
Isoform_134641_23	chr4	+	850	4	FSM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	-40	64	-29	-64	multi-exon	FALSE	canonical	3	1675	junction_1	40.2685430026411	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACATCCTGGTCAA	NA	False	NA	NA	False	AATAAA	-24	NA	155789551	155816582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383
Isoform_134645_1170	chr4	+	1084	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	295	93	-29	-93	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTCTGTTGTTGGCC	NA	False	NA	24	True	AATAAA	-24	NA	155789551	155818243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
Isoform_134647_58	chr4	+	1127	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	252	93	-72	-93	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTCTGTTGTTGGCC	NA	False	NA	24	True	AATAAA	-24	NA	155789508	155818243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
Isoform_134650_58	chr4	+	1141	5	NIC	ENSMUSG00000029066.13	novel	810	5	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	558.135064298956	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGTGAGTTATTTCCT	NA	False	NA	19	True	AATAAA	-15	NA	155887320	155893285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155887553_155887829_155888200_155888289_155888401_155891364_155891443_155892935
Isoform_134652_865	chr4	+	654	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	107	3	-19	-3	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGTGAGTTATTTCCT	NA	False	NA	19	True	AATAAA	-15	NA	155888084	155893285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
Isoform_134654_13	chr4	+	1340	5	NNC	ENSMUSG00000029066.13	novel	810	5	NA	NA	45	-2	at_least_one_novel_splicesite	FALSE	non_canonical	2	29	junction_1	563.73414611854	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGAGTTATTTCCTG	NA	False	NA	20	True	AATAAA	-16	NA	155887379	155893286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_155887667_155887686_155888200_155888289_155888401_155891364_155891443_155892935
Isoform_134655_15	chr4	+	1302	4	FSM	ENSMUSG00000029068.17	ENSMUST00000136370.2	833	4	-271	-198	6	198	multi-exon	FALSE	canonical	3	885	junction_3	91.4123745573991	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAGATAAAAACA	4643	False	NA	NA	False	NA	NA	NA	155896963	155900513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699
Isoform_13466_10	chr11	-	3549	6	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	17	0	intron_retention	FALSE	canonical	3	192	junction_5	22.1178660815188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385075	61379637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61384781_61384905
Isoform_134662_191	chr4	+	4032	11	FSM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	1	187	1	53	multi-exon	FALSE	canonical	3	294	junction_8	224.905068862398	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGGGCTGTCATT	4638	False	NA	21	True	AATAAA	-26	NA	155896958	155908813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
Isoform_134666_155	chr4	+	2236	11	FSM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	19	187	7	53	multi-exon	FALSE	canonical	3	294	junction_8	247.410205933385	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGGGCTGTCATT	4644	False	NA	21	True	AATAAA	-26	NA	155896964	155908813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
Isoform_134671_39	chr4	+	4576	10	NIC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	52	intron_retention	FALSE	canonical	3	294	junction_7	226.622272340976	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4644	False	NA	20	True	AATAAA	-25	NA	155896964	155908812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
Isoform_134676_90	chr4	+	862	4	NIC	ENSMUSG00000065990.13	novel	1159	4	NA	NA	6	6	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	1100.13494121807	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCCGACCTAGAGTTTCT	NA	False	NA	33	True	AATAAA	-23	NA	155916131	155917524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155916193_155916349_155916528_155916808_155917255_155917347
Isoform_134677_864	chr4	+	774	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	324	61	6	8	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGACCTAGAGTTTCTTT	NA	False	NA	35	True	AATAAA	-25	NA	155916131	155917526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
Isoform_134678_247	chr4	+	788	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	301	70	-7	-1	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTAGGCCGACCTAG	NA	False	NA	26	True	AATAAA	-16	NA	155916108	155917517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
Isoform_134679_22	chr4	+	862	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	219	78	-49	-9	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCAATTATTCTAGGC	NA	False	NA	18	True	AATAAA	-8	NA	155916026	155917509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
Isoform_134681_46	chr4	+	895	4	NIC	ENSMUSG00000065990.13	novel	773	4	NA	NA	6	8	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	1112.8534894086	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGACCTAGAGTTTCTTT	NA	False	NA	35	True	AATAAA	-25	NA	155916131	155917526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155916224_155916349_155916528_155916808_155917255_155917347
Isoform_134683_16	chr4	+	888	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	-79	-36	-29	6	multi-exon	FALSE	canonical	3	281	junction_1	1010.64072086309	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCCGACCTAGAGTTTCT	NA	False	NA	33	True	AATAAA	-23	NA	155916046	155917524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
Isoform_134684_36	chr4	+	1032	3	FSM	ENSMUSG00000065990.13	ENSMUST00000105592.8	1029	3	16	-19	6	19	multi-exon	FALSE	canonical	3	2371	junction_1	52	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTTGGCTTGGTGTG	NA	False	NA	46	True	AATAAA	-36	NA	155916131	155917537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155916528_155916808_155917255_155917347
Isoform_134688_5	chr4	+	2205	10	FSM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	4	-6	4	6	multi-exon	FALSE	canonical	1	2	junction_3	12.5648932828686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGACCTGCTGCTCTC	NA	False	NA	18	True	AATAAA	-19	NA	155924186	155928551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155924348_155925234_155925256_155925362_155925666_155925901_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
Isoform_134689_6	chr4	+	2212	10	NIC	ENSMUSG00000029070.10	novel	2203	10	NA	NA	-12	6	combination_of_known_junctions	TRUE	canonical	1	1	junction_2	13.0194536306062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGACCTGCTGCTCTC	NA	False	NA	18	True	AATAAA	-19	NA	155924170	155928551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155924348_155925234_155925256_155925371_155925666_155925901_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
Isoform_134690_43	chr4	+	1764	7	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1675	-6	-903	6	3prime_fragment	FALSE	canonical	3	23	junction_2	4.10960933531265	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGACCTGCTGCTCTC	NA	False	NA	18	True	AATAAA	-19	NA	155925857	155928551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
Isoform_134692_196	chr4	+	3330	15	FSM	ENSMUSG00000029071.17	ENSMUST00000030948.16	3358	15	27	1	27	0	multi-exon	FALSE	canonical	3	98	junction_6	19.2953679542474	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931885	155943759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
Isoform_134693_5	chr4	+	3343	15	NNC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-2	0	intron_retention	FALSE	canonical	2	5	junction_11	38.5097390279394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931915	155943760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940546_155940721_155940818_155940987_155941070_155941278_155942449
Isoform_134694_7	chr4	+	3415	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	27	0	intron_retention	FALSE	canonical	3	98	junction_6	19.6592270219506	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931885	155943759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
Isoform_134695_44	chr4	+	3372	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	113	junction_7	17.0970082853022	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931915	155943760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
Isoform_13470_9	chr11	-	3044	6	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-36	-6	intron_retention	FALSE	canonical	3	175	junction_4	30.6502854799103	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385050	61379643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61383896_61384472_61384781_61384905
Isoform_134705_2285	chr4	+	2113	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	21	234	0	136	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	2285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	32	True	AATAAA	-20	NA	155954023	155973326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
Isoform_134706_171	chr4	+	2350	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	19	-1	-2	1	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCACTGTGTACCGTCAT	9979	False	NA	22	True	AATAAA	-22	NA	155954021	155973561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
Isoform_134728_118	chr4	+	3923	24	FSM	ENSMUSG00000029033.17	ENSMUST00000105584.10	4365	24	443	-1	-7	0	multi-exon	FALSE	canonical	3	47	junction_10	11.8275254879557	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGCTCATTGCCT	NA	False	NA	11	True	AATAAA	-16	NA	155976721	155991708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155985460_155985473_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
Isoform_134730_6	chr4	+	4349	24	FSM	ENSMUSG00000029033.17	ENSMUST00000105584.10	4365	24	14	2	14	-2	multi-exon	TRUE	canonical	3	47	junction_10	11.8275254879557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGCTGCCTGCTCATTG	NA	False	NA	8	True	AATAAA	-13	NA	155976292	155991705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155985460_155985473_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
Isoform_134731_4	chr4	+	3913	23	FSM	ENSMUSG00000029033.17	ENSMUST00000079031.6	4301	23	388	0	-9	0	multi-exon	FALSE	canonical	1	2	junction_9	17.5901456259036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGCTCATTGCCT	NA	False	NA	11	True	AATAAA	-16	NA	155976719	155991708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
Isoform_134732_192	chr4	+	1462	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	-27	-1	-8	1	multi-exon	FALSE	canonical	3	230	junction_1	334.708584793838	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTGTGTGTGTTCTT	768	False	NA	35	True	TATAAA	-17	NA	156028298	156042169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
Isoform_134734_323	chr4	+	1285	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	25	-1	-5	1	multi-exon	FALSE	canonical	3	344	junction_1	275.8918870379	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTGTGTGTGTTCTT	782	False	NA	35	True	TATAAA	-17	NA	156028312	156042169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
Isoform_134737_266	chr4	+	1582	8	FSM	ENSMUSG00000023286.17	ENSMUST00000024056.10	3483	8	6	1895	-5	-2	multi-exon	FALSE	canonical	3	207	junction_1	340.827324764495	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATACTCTGTGTGTGTT	782	False	NA	32	True	TATAAA	-14	NA	156028312	156042166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
Isoform_134739_336	chr4	+	1421	7	FSM	ENSMUSG00000023286.17	ENSMUST00000166489.8	3339	7	26	1892	-4	1	multi-exon	FALSE	canonical	3	339	junction_1	277.674519696873	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTGTGTGTGTTCTT	783	False	NA	35	True	TATAAA	-17	NA	156028313	156042169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
Isoform_134745_3	chr4	+	1670	6	ISM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	10	3	10	-3	intron_retention	FALSE	canonical	3	21	junction_4	2.72763633939717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGTGCACTCTGCT	NA	False	NA	7	True	AATAAA	-21	NA	156046784	156051083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322
Isoform_134746_36	chr4	+	1306	8	FSM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	8	1	8	-1	multi-exon	FALSE	canonical	3	21	junction_4	2.37332110369088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTGCACTCTGCTTA	NA	False	NA	9	True	AATAAA	-23	NA	156046782	156051085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
Isoform_134749_25	chr4	+	1646	8	FSM	ENSMUSG00000029076.15	ENSMUST00000105579.8	1670	8	22	2	-17	-2	multi-exon	FALSE	canonical	3	37	junction_1	241.738769445576	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077350	156094665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156077464_156077609_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
Isoform_134755_590	chr4	+	1521	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	254	3402	-5	-2	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077621	156094665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
Isoform_134757_205	chr4	+	1728	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	47	3402	47	-2	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077414	156094665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
Isoform_134762_36	chr4	+	1792	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	-17	3402	-17	-2	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077350	156094665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
Isoform_134768_19	chr4	+	4881	8	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	254.552749034098	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTGTGCACGTGTG	NA	False	NA	4	True	NA	NA	NA	156077621	156098065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230_156095351_156095390
Isoform_134781_55	chr4	+	2526	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	2	0	-1	0	multi-exon	FALSE	canonical	3	69	junction_5	55.1321644374276	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8257	False	NA	22	True	NA	NA	NA	156194440	156211722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_134783_23	chr4	+	2603	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	69	junction_5	54.3310166939659	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8270	False	NA	22	True	NA	NA	NA	156194453	156211722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_134784_44	chr4	+	2847	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_1	48.8618908250592	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_134787_16	chr4	+	2422	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	67.7595703572565	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8265	False	NA	22	True	NA	NA	NA	156194448	156211722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_134791_9	chr4	+	5527	8	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	1	intron_retention	FALSE	canonical	3	88	junction_1	50.3550658132945	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8270	False	NA	21	True	NA	NA	NA	156194453	156211721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_134792_21	chr4	+	5614	7	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	88	junction_1	43.7483333015861	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8270	False	NA	18	True	NA	NA	NA	156194453	156211718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_134795_14	chr4	+	2674	11	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	73.1142257019795	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8259	False	NA	19	True	NA	NA	NA	156194442	156211719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_134796_10	chr4	+	2756	10	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	0	intron_retention	FALSE	canonical	1	9	junction_3	76.5216018883266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8270	False	NA	22	True	NA	NA	NA	156194453	156211722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_134798_40	chr4	+	2627	10	FSM	ENSMUSG00000059939.14	ENSMUST00000169550.8	2660	10	32	1	0	-1	multi-exon	FALSE	canonical	3	69	junction_5	55.5417760689095	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8303	False	NA	19	True	NA	NA	NA	156194486	156211719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_134799_25	chr4	+	2736	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	69	junction_5	54.8475158963467	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8283	False	NA	18	True	NA	NA	NA	156194466	156211718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_134800_32	chr4	+	2962	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	85	junction_1	49.4621067080649	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8293	False	NA	22	True	NA	NA	NA	156194476	156211722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_134801_10	chr4	+	3048	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	85	junction_1	45.1781055876604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8297	False	NA	22	True	NA	NA	NA	156194480	156211722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_134803_5	chr4	+	2638	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	23	junction_4	69.4132846192474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8286	False	NA	19	True	NA	NA	NA	156194469	156211719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_134804_7	chr4	+	5647	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	5	-2	intron_retention	FALSE	canonical	3	85	junction_1	51.0613876243336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8297	False	NA	18	True	NA	NA	NA	156194480	156211718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_134807_9	chr4	+	2875	10	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-3	1	intron_retention	FALSE	canonical	1	9	junction_3	76.6927491864634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8300	False	NA	21	True	NA	NA	NA	156194483	156211721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_134816_6154	chr4	+	2581	19	FSM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	11	193	11	-180	multi-exon	FALSE	canonical	0	0	junction_6	452.638591421947	6154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320477	156331880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
Isoform_134817_1518	chr4	+	2740	19	FSM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	6	39	6	-26	multi-exon	TRUE	canonical	0	0	junction_6	452.638591421947	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGCTTTTCTTCTTA	NA	False	NA	-13	True	NA	NA	NA	156320472	156332034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
Isoform_13484_81	chr11	-	4244	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	47	junction_6	113.072029921715	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470512	61408074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
Isoform_134848_8	chr4	-	3244	2	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_156326258_156327022
Isoform_134860_3	chr4	+	661	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-106912	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	337.66579261157	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146426567	146550672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146426715_146428065_146428160_146547961_146548020_146548860_146548988_146550437
Isoform_134861_3	chr4	+	610	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33251	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	321.464617026509	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500228	146550672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146500373_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_134862_105	chr4	+	1355	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	225.311693826574	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407541	117531478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_134863_10	chr4	+	1422	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-24	-3	at_least_one_novel_splicesite	TRUE	canonical	3	50	junction_8	282.366755081047	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCTAGTGTGTCTGGAG	NA	False	NA	6	True	AATAAA	-13	NA	117407537	117531475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
Isoform_134865_34	chr4	+	1353	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	270.430097252506	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407537	117531478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_117407560_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_134866_106	chr4	+	1285	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_1	221.525785111774	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407537	117531480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_117407560_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_134869_76	chr4	+	1005	7	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	242.081769931842	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407537	117531478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_117407560_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_13487_30	chr11	-	4367	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	123.776780367017	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470500	61408074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61470392
Isoform_134871_34	chr4	+	1275	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	247.509142276006	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407541	117531480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_117407560_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_134872_17	chr4	+	4916	3	Intergenic	novelGene_8181	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCACCCCAACCCATCC	2304	False	NA	NA	False	AATAAA	-15	NA	146289362	146300335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146289526_146291416_146291510_146295675
Isoform_134884_8	chr4	+	537	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16633	-4099	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	367.768949205884	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGAAGTTTGCAAATAC	1861	False	NA	NA	False	AAAAAG	-18	NA	146516846	146550650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146516986_146547961_146548020_146548860_146548988_146550437
Isoform_134885_3	chr4	+	2581	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-2061	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	367.768949205884	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATTTAATTCAAATGAG	1855	False	NA	NA	False	AATAAA	-15	NA	146516840	146552688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146516986_146547961_146548020_146548860_146548988_146550437
Isoform_134886_119	chr4	+	604	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	1855	False	NA	NA	False	AAAAAG	-33	NA	146516840	146550665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_134889_13	chr4	+	2643	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-2045	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCCAATTGAGAAAAATT	1855	False	NA	NA	False	AATAAA	-31	NA	146516840	146552704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_134890_6	chr4	+	3832	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-856	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTATGTCCATCCACTA	1855	False	NA	NA	False	NA	NA	NA	146516840	146553893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_134891_4	chr4	+	2721	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16642	-1949	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	293.581062059527	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGCTTCGAGTATTC	1852	False	NA	NA	False	TATAAA	-16	NA	146516837	146552800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437_146552647_146552667
Isoform_134892_35	chr4	+	638	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16633	-4067	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	299.080674735095	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTTAACTTTGTTTTC	1861	False	NA	NA	False	AATACA	-12	NA	146516846	146550682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146516986_146533486_146533556_146547961_146548020_146548860_146548988_146550437
Isoform_134895_9	chr4	+	705	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16642	-4079	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	304.163114134505	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	1852	False	NA	NA	False	AAAAAG	-38	NA	146516837	146550670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_134896_12	chr4	+	2119	6	Intergenic	novelGene_8321	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_4	6.89927532426414	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	156390432	156410403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
Isoform_134897_9	chr4	+	2203	6	Intergenic	novelGene_8318	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_4	6.89927532426414	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	156390348	156410403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
Isoform_134899_43	chr4	+	1923	7	Intergenic	novelGene_8319	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_5	9.7581874455363	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	156390350	156410403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
Isoform_134905_7	chr4	+	1753	7	Intergenic	novelGene_8322	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	33.1963853453957	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	156390506	156410403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156390627_156404917_156405012_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
Isoform_134906_3	chr4	+	1898	7	Intergenic	novelGene_8320	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	33.1963853453957	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAATAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	156390359	156410401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156390627_156404917_156405012_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
Isoform_134908_18	chr4	+	2845	4	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4290	1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	76.4852927038918	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	146038204	146063192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146038353_146054375_146054480_146058453_146058581_146060726
Isoform_134909_17	chr4	+	2886	4	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4248	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	76.4852927038918	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	146038162	146063191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146038353_146054375_146054480_146058453_146058581_146060726
Isoform_134910_16	chr4	+	2714	3	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4290	-3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	19.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146038204	146063188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146038353_146054375_146054480_146060726
Isoform_134912_18	chr4	+	4287	6	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55160	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	187.318552204527	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGACTTGGCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	146038233	146135321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146038353_146094927_146095022_146102109_146102186_146126781_146126867_146129876_146130004_146131535
Isoform_134914_34	chr4	+	4217	5	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55160	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	214.304106353565	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146038233	146135327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146038353_146094927_146095022_146126781_146126867_146129876_146130004_146131535
Isoform_134919_8	chr4	+	3764	4	Intergenic	novelGene_8177	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	36.5908306668336	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146223569	146256592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146223715_146250678_146250737_146251579_146251707_146253158
Isoform_134921_29	chr4	+	3808	5	Intergenic	novelGene_8179	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATCCGCTACGGCTCC	NA	False	NA	NA	False	NA	NA	NA	146223576	146256597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
Isoform_134922_3	chr4	+	5594	5	Intergenic	novelGene_8180	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTTCTGAGGATTGTT	NA	False	NA	NA	False	NA	NA	NA	146223576	146258383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
Isoform_134924_3	chr4	+	2776	5	Intergenic	novelGene_8176	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGCTTCGAGTATTC	NA	False	NA	NA	False	TATAAA	-16	NA	146223532	146255521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
Isoform_134927_12	chr4	+	3838	5	Intergenic	novelGene_8178	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	31.0523751104485	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATCCGCTACGGCTCC	NA	False	NA	NA	False	NA	NA	NA	146223569	146256597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146223715_146240246_146240316_146250678_146250737_146251579_146251707_146253158
Isoform_134929_9	chr4	+	665	6	Fusion	ENSMUSG00000085525.8_ENSMUSG00000070605.5	novel	4550	4	NA	NA	-6741	-4084	multi-exon	FALSE	canonical	3	35	junction_4	264.387140383189	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146200159	146550665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_146200273_146209452_146209546_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_134930_4	chr4	+	647	5	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6769	38382	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	54.7973539507155	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146200131	146253386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146200273_146209452_146209546_146250678_146250737_146251579_146251707_146253158
Isoform_134931_5	chr4	+	671	6	Fusion	ENSMUSG00000084350.2_ENSMUSG00000094417.2	novel	2413	3	NA	NA	-41	-2022	multi-exon	FALSE	canonical	2	3	junction_4	108.584713472938	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTCTGTAAACAGTTTA	NA	False	NA	NA	False	AATACA	-1	NA	145501247	145554490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
Isoform_134932_6	chr4	+	686	6	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6732	38389	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	51.6	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146200168	146253393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146200273_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
Isoform_134933_3	chr4	+	540	4	Fusion	ENSMUSG00000081460.2_ENSMUSG00000070605.5	novel	4550	4	NA	NA	17	-4084	multi-exon	FALSE	canonical	2	3	junction_1	371.225298467416	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146200145	146550665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_146200273_146547961_146548020_146548860_146548988_146550437
Isoform_134934_4	chr4	+	634	5	Fusion	ENSMUSG00000081460.2_ENSMUSG00000070605.5	novel	4550	4	NA	NA	-8	-4084	multi-exon	FALSE	canonical	3	32	junction_1	319.015183807918	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146200120	146550665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr4_+_146200273_146533486_146533556_146547961_146548020_146548860_146548988_146550437
Isoform_134935_11	chr4	+	2522	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	56.7430625533113	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696417	115736445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_115696439_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_134937_55	chr4	+	2477	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	42.5606593255112	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696418	115736445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_134940_6	chr4	+	2642	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	-11	2	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_3	63.5091196917708	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCCTTGGTGGTCC	NA	False	NA	12	True	AATAAA	-18	NA	115696406	115736449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_115696439_115705416_115705560_115713764_115713914_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_134942_5	chr4	+	610	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40299	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	313.418550025361	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146493180	146550665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146493332_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_134944_18	chr4	+	3802	2	Genic_Genomic	ENSMUSG00000081998.2_ENSMUSG00000073716.7	novel	780	1	NA	NA	-401	1392	multi-exon	FALSE	canonical	3	12	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAATCCACAGGACTC	NA	False	NA	5	True	AATAAA	-40	NA	146559387	146566775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_146561061_146564646
Isoform_13495_15	chr11	-	4374	12	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	139.344866197278	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470500	61408074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61444335_61444406_61456647_61456721_61470392
Isoform_134950_4	chr4	+	5481	2	Intergenic	novelGene_8210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	147533610	147541476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147533786_147536170
Isoform_134951_27	chr4	+	409	3	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	49	-38430	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_2	52.5	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146695466	146703634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146695757_146697966_146698060_146703608
Isoform_134956_36	chr4	+	3880	4	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3824	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	187.21289129402	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	145401078	145431010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_145401211_145422720_145422806_145425813_145425941_145427474
Isoform_134957_14	chr4	+	3877	4	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3824	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	197.444225598578	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	145401078	145431010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_145401211_145422723_145422806_145425813_145425941_145427474
Isoform_134959_39	chr4	+	2621	4	NNC	ENSMUSG00000078508.2	novel	1745	3	NA	NA	-3259	782	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	5.90668171555645	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTGAGTATTTTTTT	NA	False	NA	NA	False	AATGAA	-11	NA	144053559	144060817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_144053628_144056792_144057106_144057681_144058255_144059150
Isoform_134961_28	chr4	+	2669	4	NNC	ENSMUSG00000078508.2	novel	1745	3	NA	NA	-3307	782	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	5.90668171555645	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTGAGTATTTTTTT	NA	False	NA	NA	False	AATGAA	-11	NA	144053511	144060817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_144053628_144056792_144057106_144057681_144058255_144059150
Isoform_134963_3	chr4	+	7422	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-71325	4602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.1810708480496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTTGGAAAAGTGCCT	8175	False	NA	8	True	NA	NA	NA	147318805	147422793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_147318928_147409230_147409335_147413438_147413566_147415724
Isoform_134964_4	chr4	+	562	4	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-258094	-844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.96362433705	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGCAGTGAATGTGACA	8149	False	NA	13	True	NA	NA	NA	147318779	147597033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_147318928_147592042_147592098_147595209_147595337_147596801
Isoform_134965_4	chr4	+	2703	4	NNC	ENSMUSG00000065999.14	novel	628	4	NA	NA	-318963	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.4386032649185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGCTTTGGTTGTT	8140	False	NA	NA	False	NA	NA	NA	147318770	147669651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_147318928_147661528_147661587_147665698_147665826_147667290
Isoform_134966_41	chr4	+	3398	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-59	28	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	14.4299072146089	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	-5	True	NA	12	True	AATAAA	-20	NA	12089379	12096271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_12089506_12089662_12089728_12092522_12092573_12093114
Isoform_134969_3	chr4	+	3421	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-16	26	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	20.6774165590278	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTTGTATTTGTGTA	38	False	NA	10	True	AATAAA	-18	NA	12089422	12096269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_12089506_12089662_12089796_12092522_12092573_12093114
Isoform_134970_4	chr4	+	3321	3	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-50	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAACTTGTATTTGTGT	4	True	NA	9	True	AATAAA	-17	NA	12089388	12096268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_12089506_12092522_12092573_12093114
Isoform_134972_5	chr4	+	4394	2	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14340	2910	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGACTTATCCTGAT	NA	False	NA	17	True	ATTAAA	-13	NA	145158969	145180368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_145159032_145176036
Isoform_134973_4	chr4	+	2527	3	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14334	773	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	24.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGCTTTGGTTGTT	NA	False	NA	17	True	NA	NA	NA	145158975	145178231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_145159032_145173065_145173342_145176036
Isoform_134974_3	chr4	+	4677	3	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14338	2919	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	24.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCCTGATTTTTTTAAT	NA	False	NA	26	True	ATTAAA	-22	NA	145158971	145180377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_145159032_145173065_145173342_145176036
Isoform_134975_26	chr4	+	4923	30	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-416	0	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_14	7.38929392329869	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCTTCTGATGTTTT	NA	False	NA	NA	False	AATGAA	-19	NA	152562182	152647640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
Isoform_13498_22	chr11	-	4231	10	NIC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	124.448115025232	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470500	61408074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61470392
Isoform_134983_27	chr4	+	965	2	Genic_Genomic	ENSMUSG00000082352.2	novel	634	1	NA	NA	-9879	87	multi-exon	FALSE	canonical	3	94	junction_1	0	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAAAGCTGTGTAAGATT	7482	False	NA	13	True	AAGAAA	-9	NA	145291218	145301818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_145291368_145301002
Isoform_134985_8	chr4	+	1545	3	Genic_Genomic	ENSMUSG00000082352.2	novel	634	1	NA	NA	-9911	767	multi-exon	FALSE	non_canonical	0	0	junction_2	47	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTATTGTTGTCCT	7450	False	NA	NA	False	AGTAAA	-10	NA	145291186	145302498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_145291368_145301002_145301704_145301835
Isoform_134986_3	chr4	+	1192	7	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16178	-7421	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.40575824674229	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACAACTCCTCTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	109075503	109103599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344
Isoform_134987_22	chr4	+	1963	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16146	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTGTCTTATTTCT	NA	False	NA	3	True	TTTAAA	-20	NA	109075535	109111767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
Isoform_134990_20	chr4	+	3230	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	204.250305997323	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTTACTTAATGTCCC	NA	False	NA	31	True	NA	NA	NA	98615030	98626716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_98615239_98615631_98615708_98621379_98622316_98624682_98625038_98625061
Isoform_134993_10	chr4	+	1995	6	NNC	ENSMUSG00000028779.17	novel	1551	5	NA	NA	470	3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	88.3026613415473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGACTGTGTGTCCGT	4750	False	NA	29	True	AATAAA	-36	NA	129996820	130021931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_129997068_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
Isoform_134994_9	chr4	+	2096	6	NNC	ENSMUSG00000028779.17	novel	1551	5	NA	NA	366	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	88.3026613415473	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCTTGACTGTGTGTC	4646	False	NA	26	True	AATAAA	-33	NA	129996716	130021928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_129997068_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
Isoform_134995_5	chr4	+	1894	6	NNC	ENSMUSG00000028779.17	novel	1551	5	NA	NA	469	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.1767866656242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTTGACTGTGTGTCC	4749	False	NA	27	True	AATAAA	-34	NA	129996819	130021929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_129997068_130001255_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
Isoform_134996_35	chr4	+	1523	6	NNC	ENSMUSG00000028478.19	novel	1121	6	NA	NA	-629	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	519.17110859523	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	False	NA	21	True	AATAAA	-21	NA	44003822	44032846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_44003885_44012261_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
Isoform_134997_24	chr4	+	663	3	Intergenic	novelGene_8096	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	52	junction_1	9.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCCTATATCTTTTCTG	4294	False	NA	2	True	NA	NA	NA	138225895	138255982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_138226002_138226562_138226737_138255599
Isoform_134999_12	chr4	+	3768	10	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-232	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.5414365925061	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAGTAAGGGACCATGT	NA	False	NA	17	True	AATAAA	-17	NA	63476785	63504593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_63476967_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_135001_4	chr4	+	3839	10	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-303	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.5414365925061	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAGTAAGGGACCATGT	NA	False	NA	17	True	AATAAA	-17	NA	63476714	63504593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_63476967_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_135003_4	chr4	+	1165	4	NNC	ENSMUSG00000085334.8	novel	574	3	NA	NA	-1879	-5	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	134.514765814844	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTCTTTGTTCAAG	NA	False	NA	13	True	AATAAA	-14	NA	126925644	126930801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_126926599_126929600_126929648_126930355_126930443_126930724
Isoform_135004_30	chr4	+	2542	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-239	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	154.279778324964	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640196	130663450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_130640218_130640512_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
Isoform_135006_9	chr4	+	4337	22	NNC	ENSMUSG00000028397.14	novel	1844	8	NA	NA	187	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.2580822483617	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170359	74324098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_74170651_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
Isoform_13501_13	chr11	-	4266	10	NIC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_9	124.703302202656	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470500	61408074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61470392
Isoform_135016_20	chr4	+	2262	7	NNC	ENSMUSG00000028737.16	novel	4142	15	NA	NA	18760	-5	intron_retention	FALSE	canonical	3	14	junction_1	86.9471423081607	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTATATTTTGATCG	5572	False	NA	18	True	NA	NA	NA	139369179	139376993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_139369278_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
Isoform_135018_4	chr4	+	3328	16	NNC	ENSMUSG00000028859.15	novel	3160	15	NA	NA	-1122	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	2.99332590941915	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATGTACTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	125917220	125938227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_125917419_125921109_125921194_125923555_125923856_125925590_125925715_125925904_125926093_125927962_125928133_125928214_125928369_125929091_125929172_125929558_125929773_125931312_125931502_125931820_125931923_125933298_125933446_125933554_125933690_125936452_125936544_125936696_125936779_125937157
Isoform_135019_4	chr4	+	3248	15	NNC	ENSMUSG00000028859.15	novel	921	5	NA	NA	-1124	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3.17274747350183	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTACTTGTTTTGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	125917218	125938229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_125917419_125923555_125923856_125925590_125925715_125925904_125926093_125927962_125928133_125928214_125928369_125929091_125929172_125929558_125929773_125931312_125931502_125931820_125931923_125933298_125933446_125933554_125933690_125936452_125936544_125936696_125936779_125937157
Isoform_135022_13	chr4	+	997	5	NNC	ENSMUSG00000029066.13	novel	810	5	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	571.487696717961	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGAGTTATTTCCTGG	NA	False	NA	21	True	AATAAA	-17	NA	155887337	155893287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_155887424_155887829_155888200_155888289_155888401_155891364_155891443_155892935
Isoform_135024_3	chr4	+	1745	10	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-3498	-68	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	30.2426401617091	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGGCCTTGAATACTT	2910	False	NA	-63	True	AATAGA	-11	NA	43558833	43566992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_43558890_43562458_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_135025_8	chr4	+	1617	10	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-3497	68	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	30.2426401617091	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCCTTTGCTCACGT	2911	False	NA	12	True	AATAAA	-14	NA	43558834	43566865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_43558890_43562458_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_135026_3	chr4	+	1813	10	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-3498	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	30.2426401617091	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTTACTGGCACA	2910	False	NA	5	True	AATAAA	-14	NA	43558833	43567060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_43558890_43562458_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_135027_8	chr4	+	3713	2	Intergenic	novelGene_7584	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAGAAAGAAAG	0	True	NA	NA	False	NA	NA	NA	53341419	53346189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_53341538_53342594
Isoform_135028_13	chr4	+	1273	2	NNC	ENSMUSG00000085918.2	novel	2001	3	NA	NA	3372	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTATGTGTATGGGTG	NA	False	NA	NA	False	NA	NA	NA	140541675	140544816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_140542139_140544006
Isoform_135029_3	chr4	+	3161	2	NNC	ENSMUSG00000085918.2	novel	2001	3	NA	NA	3411	1921	intron_retention	FALSE	canonical	3	10	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTGTGTGAGTCTGG	NA	False	NA	NA	False	NA	NA	NA	140541714	140546743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_140542139_140544006
Isoform_13503_19	chr11	-	4268	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	118.026780806961	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470500	61408075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61456647_61456721_61470392
Isoform_135030_10	chr4	+	2201	11	NNC	ENSMUSG00000041143.17	novel	2922	16	NA	NA	28326	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	21.6529443725328	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	3250	False	NA	24	True	AATAAA	-15	NA	138728545	138786478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_138728573_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_135032_6	chr4	+	3732	4	NNC	ENSMUSG00000070890.4	novel	1452	3	NA	NA	-1944	2181	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_3	2.94392028877595	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTCCTGGAACTC	NA	False	NA	NA	False	NA	NA	NA	101795659	101802561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_101795732_101797576_101797891_101798317_101798903_101799800
Isoform_135033_9	chr4	+	2929	4	NNC	ENSMUSG00000046667.15	novel	2949	4	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	14.7196014438797	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATTTCCTGTATTCATT	8	False	NA	NA	False	AATAAA	-27	NA	12140308	12146740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_12140384_12140540_12140606_12143409_12143460_12144001
Isoform_135034_3	chr4	+	1791	2	Antisense	novelGene_ENSMUSG00000035407.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACAGATTAGCATT	8917	False	NA	NA	False	NA	NA	NA	98674759	98680024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_98674887_98678360
Isoform_135036_4	chr4	+	1924	3	Antisense	novelGene_ENSMUSG00000035407.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACAGATTAGCATTT	8963	False	NA	NA	False	NA	NA	NA	98674805	98680025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_98674887_98678050_98678229_98678360
Isoform_135038_8	chr4	+	664	2	Antisense	novelGene_ENSMUSG00000028399.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAATGTTTAGCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	77228969	77232614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_77229411_77232391
Isoform_135039_6	chr4	+	1565	3	NNC	ENSMUSG00000039693.12	novel	1589	3	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	150	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTACACTGTGTATGTTT	12	False	NA	16	True	NA	NA	NA	48539928	48561920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_48539966_48552379_48552831_48560843
Isoform_13504_468	chr11	-	4196	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	11	0	-4	0	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470500	61408074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
Isoform_135042_10	chr4	+	3779	17	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-5147	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	33.5838502855167	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGCTTTCATTCCTG	9594	False	NA	6	True	AATAAA	-20	NA	141023403	141056693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_141023467_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
Isoform_135046_8	chr4	+	3821	21	NNC	ENSMUSG00000039713.18	novel	2792	7	NA	NA	473	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.2496715312717	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAAGAGTCATGCGCTT	3400	False	NA	29	True	TATAAA	-18	NA	152181648	152199848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_152181816_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_135048_5	chr4	+	642	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16633	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	318.789115247055	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	1861	False	NA	NA	False	AAAAAG	-33	NA	146516846	146550665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146517030_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_135050_4	chr4	+	5057	20	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	278	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	28.6159012804801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTTAGAAATATAC	NA	False	NA	2	True	ATTAAA	-10	NA	101354122	101499991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_101354174_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_135051_4	chr4	+	4991	19	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	278	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	28.2410261066335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101354122	101499990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_101354174_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_135052_4	chr4	+	3014	3	NNC	ENSMUSG00000037028.8	novel	1455	3	NA	NA	-1968	1546	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	101764349	101770651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_101764446_101766835_101767628_101768525
Isoform_135053_7	chr4	+	1989	9	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	35	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	31.8313426515439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTCCTTGCCTTAGT	77	False	NA	10	True	AATAAA	-22	NA	103171043	103223634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_103171196_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
Isoform_135056_8	chr4	+	1676	2	Genic_Genomic	ENSMUSG00000074738.3	novel	2140	1	NA	NA	18	4	multi-exon	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTTGTGTGTTTAT	NA	False	NA	12	True	NA	NA	NA	155778816	155780942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_155780366_155780815
Isoform_135061_4	chr4	+	342	3	NNC	ENSMUSG00000005045.17	novel	9486	42	NA	NA	3785	30	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGGAGAAGAAGGAGA	NA	False	NA	NA	False	NA	NA	NA	152429836	152438113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_152429935_152432392_152432521_152437997
Isoform_135063_4	chr4	+	2644	20	NNC	ENSMUSG00000028576.13	novel	549	4	NA	NA	-11223	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	42.3082606551911	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTTCCTGTGTTTGTG	NA	False	NA	14	True	AATAAA	-15	NA	94491504	94581470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_94492167_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
Isoform_135064_9	chr4	+	311	2	Antisense	novelGene_ENSMUSG00000062518.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	49	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTTTTAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	147719912	147779496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_147720076_147779348
Isoform_135065_3	chr4	+	2567	29	NNC	ENSMUSG00000028626.6	novel	752	5	NA	NA	3615	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.8286887522475	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGTGGATGAGGATGG	NA	False	NA	25	True	AATAAA	-26	NA	120900559	120912523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_120900775_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
Isoform_135066_6	chr4	+	2011	6	NNC	ENSMUSG00000028779.17	novel	1551	5	NA	NA	469	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	90.6258241341837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGACTGTGTGTCCGT	4749	False	NA	29	True	AATAAA	-36	NA	129996819	130021931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_129997083_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
Isoform_135067_4	chr4	+	1847	15	NNC	ENSMUSG00000012123.18	novel	2714	6	NA	NA	812	1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	44.8184546537586	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	15	True	NA	NA	NA	133807041	133819813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_133807152_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_135069_5	chr4	+	2548	13	NNC	ENSMUSG00000028708.17	novel	1686	10	NA	NA	8205	9	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	47.5225092865359	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGGTGGTCCTTTTGTC	NA	False	NA	19	True	AATAAA	-25	NA	115704661	115736456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_115704742_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_135071_3	chr4	+	832	5	NNC	ENSMUSG00000028979.18	novel	794	4	NA	NA	-3633	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	12.0933866224478	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTGTGTGTCTCTTG	NA	False	NA	7	True	AATAAA	-17	NA	148683377	148688876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_148683507_148687124_148687354_148687448_148687627_148688143_148688276_148688712
Isoform_135076_4	chr4	+	2902	16	NNC	ENSMUSG00000041143.17	novel	660	5	NA	NA	8329	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.0573403764067	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTCTTCTTTTCACCTT	1660	False	NA	29	True	AATAAA	-20	NA	138708548	138786483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_138708626_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_135080_4	chr4	+	5828	44	NNC	ENSMUSG00000038368.17	novel	5456	42	NA	NA	-15314	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_35	32.805142785629	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACTTTTATTTTTAAG	NA	False	NA	14	True	AGTAAA	-23	NA	87997551	88329247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_87997631_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
Isoform_135083_4	chr4	+	1501	3	NNC	ENSMUSG00000028801.15	novel	1507	9	NA	NA	37346	-102	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCGGGTTCTTTGTGAT	NA	False	NA	9	True	ATTAAA	-21	NA	135260643	135265012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_135260829_135260949_135261141_135263887
Isoform_135086_3	chr4	+	986	3	Intergenic	novelGene_8290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTGATGAATGCTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	154766198	154767525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_154766350_154766491_154766562_154766760
Isoform_135089_3	chr4	+	733	5	NNC	ENSMUSG00000028979.18	novel	794	4	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.3674043852949	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTGTGTGTCTCTTG	NA	False	NA	7	True	AATAAA	-17	NA	148686974	148688876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_148687005_148687124_148687354_148687448_148687627_148688143_148688276_148688712
Isoform_135093_4	chr4	+	3179	3	NNC	ENSMUSG00000028709.4	novel	2884	4	NA	NA	3665	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCAACCACTGGTG	NA	False	NA	NA	False	AATAAA	-8	NA	115689519	115693371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_115690443_115690829_115691033_115691318
Isoform_135095_4	chr4	+	1793	10	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-23961	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	38.3289852606498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	False	NA	13	True	AGTAAA	-22	NA	88294625	88329246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_88294826_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
Isoform_135096_4	chr4	+	7095	8	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25147	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	4.94871659305393	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTGTCCATTTTTTA	NA	False	NA	6	True	ATTAAA	-15	NA	53668426	53707007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_53668674_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
Isoform_135097_3	chr4	+	3795	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	1996	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.9150262212918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAGCCAAATCTCTCCAG	NA	False	NA	12	True	AATAAA	-15	NA	127068668	127130810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_127068747_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
Isoform_135099_3	chr4	+	1332	10	NNC	ENSMUSG00000028825.8	novel	701	5	NA	NA	7154	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.80471525726042	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCACAAGGTCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	134599000	134623481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_134599031_134603625_134603813_134607200_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
Isoform_135100_3	chr4	+	580	2	NNC	ENSMUSG00000028298.11	novel	687	4	NA	NA	12640	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGATGTGCCGCCTTC	1274	False	NA	NA	False	AATAAA	-17	NA	34906427	34907369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_34906704_34907065
Isoform_135101_3	chr4	+	477	2	Antisense	novelGene_ENSMUSG00000043621.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATGCATATGGGTGT	8448	False	NA	NA	False	AATAAA	-21	NA	138434186	138439068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_138434391_138438795
Isoform_135102_3	chr4	+	793	2	NNC	ENSMUSG00000050188.9	novel	943	2	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTGCCTGATGCCCTG	NA	False	NA	30	True	CATAAA	-21	NA	125990394	125992377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_125990432_125991621
Isoform_135106_6	chr4	-	204	1	Intergenic	novelGene_7393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTATGACTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	3227766	3227562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_3227600_3227800
Isoform_135107_9	chr4	+	165	1	Intergenic	novelGene_7403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGCCAGAGCAAGTGCC	NA	False	NA	NA	False	NA	NA	NA	8729494	8729659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_8729500_8729700
Isoform_135108_5	chr4	-	173	1	Intergenic	novelGene_7545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAAGACAGTG	NA	False	NA	NA	False	NA	NA	NA	45054058	45053885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_45053900_45054100
Isoform_135112_3	chr4	-	170	1	Intergenic	novelGene_7546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAAAAGAGACT	NA	False	NA	NA	False	NA	NA	NA	45175532	45175362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_45175400_45175500
Isoform_135113_18	chr4	-	181	1	Intergenic	novelGene_7547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATGCGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	45262676	45262495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_45262500_45262700
Isoform_135114_4	chr4	+	4638	1	Genic_Genomic	ENSMUSG00000035572.17	novel	NA	NA	NA	NA	-22	-23763	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	-20	True	NA	NA	False	NA	NA	NA	45342078	45346716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_45342100_45346700
Isoform_135116_7	chr4	+	217	1	Intergenic	novelGene_7548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTTGTCACAAACCCC	NA	False	NA	NA	False	NA	NA	NA	45533244	45533461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_45533200_45533500
Isoform_135117_45	chr4	+	176	1	Intergenic	novelGene_7549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATATAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	45534937	45535113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_45534900_45535100
Isoform_135118_35	chr4	+	177	1	Intergenic	novelGene_7550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTCAC	2777	False	NA	NA	False	NA	NA	NA	45801881	45802058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_45801900_45802100
Isoform_135121_12	chr4	+	160	1	Intergenic	novelGene_7551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	7362	False	NA	NA	False	NA	NA	NA	45812240	45812400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_45812200_45812400
Isoform_135129_13	chr4	+	174	1	Intergenic	novelGene_7552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACCAAAGCAAGCGGGGT	NA	False	NA	NA	False	NA	NA	NA	46198888	46199062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_46198900_46199100
Isoform_13513_21	chr11	-	3434	8	NIC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	109.403204818185	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470500	61408074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61470392
Isoform_135137_9	chr4	+	152	1	Intergenic	novelGene_7553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7295	False	NA	NA	False	NA	NA	NA	46479867	46480019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_46479900_46480000
Isoform_135138_9	chr4	-	198	1	Intergenic	novelGene_7404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	8981746	8981548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_8981500_8981700
Isoform_135141_10	chr4	+	201	1	Intergenic	novelGene_7554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGACACACACTTAGCAT	NA	False	NA	NA	False	NA	NA	NA	46570457	46570658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_46570500_46570700
Isoform_135142_3	chr4	+	186	1	Intergenic	novelGene_7555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGTTATTATTAAACAT	NA	False	NA	NA	False	NA	NA	NA	46594889	46595075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_46594900_46595100
Isoform_135144_4	chr4	-	171	1	Intergenic	novelGene_7405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	9194970	9194799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_9194800_9195000
Isoform_135145_3	chr4	-	179	1	Intergenic	novelGene_7556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAAAATAATT	2693	False	NA	NA	False	NA	NA	NA	46647502	46647323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_46647300_46647500
Isoform_135146_3	chr4	+	177	1	Intergenic	novelGene_7557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCATTGG	NA	False	NA	NA	False	NA	NA	NA	46877649	46877826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_46877600_46877800
Isoform_135147_3	chr4	-	177	1	Intergenic	novelGene_7558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	47378129	47377952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_47378000_47378100
Isoform_135158_4	chr4	+	176	1	Intergenic	novelGene_7559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAGTGTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	47965746	47965922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_47965700_47965900
Isoform_135162_12	chr4	-	526	1	Intergenic	novelGene_7560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAATGTACA	NA	False	NA	NA	False	AATAAA	-17	NA	48344121	48343595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_48343600_48344100
Isoform_135163_9	chr4	-	609	1	Intergenic	novelGene_7561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAGAAAATGTA	NA	False	NA	NA	False	AATAAA	-15	NA	48344206	48343597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_48343600_48344200
Isoform_135164_3	chr4	-	720	1	FSM	ENSMUSG00000081953.2	ENSMUST00000118949.2	1016	1	911	-615	911	615	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATGAAAAAAAAAAGAAAATG	NA	False	NA	NA	False	AATAAA	-13	NA	48344319	48343599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_48343600_48344300
Isoform_135166_71	chr17	-	201	1	Intergenic	novelGene_5181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	83323042	83322841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_83322800_83323000
Isoform_135167_3	chr4	+	3473	1	Intergenic	novelGene_7563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-37	NA	48438658	48442131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_48438700_48442100
Isoform_135169_3	chr4	+	5309	1	Intergenic	novelGene_7564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACCTTTGTCTTGGTTCC	NA	False	NA	15	True	NA	NA	NA	48513711	48519020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_48513700_48519000
Isoform_135171_19	chr4	+	5199	1	Intergenic	novelGene_7565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTGTCTTGGTTCCT	NA	False	NA	16	True	NA	NA	NA	48513822	48519021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_48513800_48519000
Isoform_135173_3	chr4	-	169	1	Intergenic	novelGene_7566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	48534402	48534233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_48534200_48534400
Isoform_135176_248	chr4	-	189	1	Intergenic	novelGene_7567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGAGTTCTGCATA	NA	False	NA	-9	True	AATAAA	-10	NA	48579022	48578833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_48578800_48579000
Isoform_135177_3	chr4	-	2677	1	Intergenic	novelGene_7568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48585011	48582334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_48582300_48585000
Isoform_135183_9	chr4	-	176	1	Intergenic	novelGene_7570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAATACACAGGAG	NA	False	NA	NA	False	NA	NA	NA	48763235	48763059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_48763100_48763200
Isoform_135184_3	chr4	+	210	1	Intergenic	novelGene_7571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTCTTCCTTAATAAG	NA	False	NA	NA	False	NA	NA	NA	48836950	48837160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_48837000_48837200
Isoform_135186_25	chr4	-	168	1	Intergenic	novelGene_7572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	49231012	49230844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_49230800_49231000
Isoform_135187_7	chr4	-	177	1	Intergenic	novelGene_7573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	49234611	49234434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_49234400_49234600
Isoform_135188_3	chr4	+	151	1	Intergenic	novelGene_7574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTTATAATAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	49505165	49505316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_49505200_49505300
Isoform_135192_10	chr4	-	841	1	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-20	47	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAAAATAAAATCAT	8	False	9669114	NA	False	CATAAA	-43	NA	9669106	9668265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_9668300_9669100
Isoform_135193_22	chr4	-	185	1	Intergenic	novelGene_7575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAACTGCATC	NA	False	NA	NA	False	NA	NA	NA	49655179	49654994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_49655000_49655200
Isoform_135196_69	chr4	+	172	1	Intergenic	novelGene_7406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTTAAAGATT	NA	False	NA	NA	False	NA	NA	NA	9671880	9672052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_9671900_9672100
Isoform_135203_4	chr4	+	4682	1	Intergenic	novelGene_7577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGTGTTGTGTTCTAT	NA	False	NA	NA	False	NA	NA	NA	51875098	51879780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_51875100_51879800
Isoform_135205_4	chr4	+	4503	1	Intergenic	novelGene_7578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGTTGTGTTCTATT	NA	False	NA	NA	False	NA	NA	NA	51875278	51879781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_51875300_51879800
Isoform_135206_4	chr4	+	3802	1	Intergenic	novelGene_7579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGGTGTTGTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	51875977	51879779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_51876000_51879800
Isoform_135208_4	chr4	+	3114	1	Intergenic	novelGene_7580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGTTGTGTTCTATT	NA	False	NA	NA	False	NA	NA	NA	51876667	51879781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_51876700_51879800
Isoform_135210_4	chr4	+	2820	1	Intergenic	novelGene_7581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGCG	NA	False	NA	NA	False	NA	NA	NA	51876965	51879785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_51877000_51879800
Isoform_135214_5	chr17	-	170	1	Intergenic	novelGene_5209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTGCAAACAAGTAA	NA	False	NA	NA	False	NA	NA	NA	87775905	87775735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_87775700_87775900
Isoform_135219_316	chr4	+	166	1	Intergenic	novelGene_7582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52517962	52518128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_52518000_52518100
Isoform_135221_5	chr4	+	6026	1	Antisense	novelGene_ENSMUSG00000015243.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2198	False	NA	NA	False	AATAAA	-40	NA	53131024	53137050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_53131000_53137000
Isoform_135223_4	chr4	-	2592	1	NIC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	3	-121813	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATGATA	0	True	NA	NA	False	NA	NA	NA	53159892	53157300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_53157300_53159900
Isoform_135224_4	chr4	-	174	1	Intergenic	novelGene_7583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	53302147	53301973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_53302000_53302100
Isoform_135225_13	chr4	+	174	1	ISM	ENSMUSG00000058006.13	ENSMUST00000138577.2	2265	3	2871	0	2871	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	2748	False	NA	NA	False	NA	NA	NA	32753441	32753615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_32753400_32753600
Isoform_135226_4	chr4	-	6193	1	Intergenic	novelGene_7585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	53490554	53484361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_53484400_53490600
Isoform_135233_27	chr4	-	180	1	Intergenic	novelGene_7407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAATAGGAAA	NA	False	NA	NA	False	NA	NA	NA	10484066	10483886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_10483900_10484100
Isoform_135235_4	chr4	-	191	1	Intergenic	novelGene_7586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAGGTTCTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	53745123	53744932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_53744900_53745100
Isoform_135239_3	chr4	-	184	1	Intergenic	novelGene_7587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATAGCAATCTTATT	NA	False	NA	NA	False	NA	NA	NA	53798903	53798719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_53798700_53798900
Isoform_135242_3	chr4	+	2353	1	ISM	ENSMUSG00000060206.12	ENSMUST00000098070.10	10465	13	133235	0	69731	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCATCTGTTAAGT	NA	False	NA	10	True	AATAAA	-19	NA	55081210	55083563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_55081200_55083600
Isoform_135243_29	chr4	-	205	1	Intergenic	novelGene_7588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTTTTACAATCTTA	NA	False	NA	NA	False	NA	NA	NA	55099899	55099694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_55099700_55099900
Isoform_135244_4	chr4	+	176	1	Intergenic	novelGene_7589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAAACTCTTT	NA	False	NA	NA	False	NA	NA	NA	55121658	55121834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_55121700_55121800
Isoform_135250_6	chr4	+	269	1	FSM	ENSMUSG00000066315.10	ENSMUST00000120234.2	636	1	405	-38	405	38	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	425	False	NA	NA	False	AATAAA	-14	NA	10848824	10849093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_10848800_10849100
Isoform_135251_9	chr4	+	179	1	Intergenic	novelGene_7590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATGAGCG	NA	False	NA	NA	False	NA	NA	NA	55200596	55200775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_55200600_55200800
Isoform_135252_28	chr4	+	176	1	Intergenic	novelGene_7591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	55238874	55239050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_55238900_55239000
Isoform_135256_17	chr4	-	173	1	Intergenic	novelGene_7592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGAGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	55320695	55320522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_55320500_55320700
Isoform_135258_6	chr4	-	1151	1	Intergenic	novelGene_7593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	55385308	55384157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_55384200_55385300
Isoform_135268_3	chr4	+	2036	1	Intergenic	novelGene_7594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAGGGAAATGA	-3	True	NA	NA	False	NA	NA	NA	55477743	55479779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_55477700_55479800
Isoform_135269_21	chr2	+	175	1	Intergenic	novelGene_6778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	166840382	166840557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_166840400_166840600
Isoform_135271_30	chr4	+	1911	1	NIC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	4	-7142	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	3574878	3576789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_3574900_3576800
Isoform_13528_57	chr11	-	1938	13	NIC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	72.6714447970376	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTCTGTATGTGGATA	232	False	NA	-11	True	AATAAA	-18	NA	61652898	61620483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652305_61652401_61652779
Isoform_135282_3	chr4	-	177	1	Intergenic	novelGene_7596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGTCTACATTATT	NA	False	NA	NA	False	NA	NA	NA	55966596	55966419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_55966400_55966600
Isoform_135288_3	chr4	+	157	1	Intergenic	novelGene_7597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	56845292	56845449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_56845300_56845400
Isoform_135291_3	chr4	-	4804	1	ISM	ENSMUSG00000055296.15	ENSMUST00000068792.13	15981	18	75606	105	51627	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCGTTTCTTAGCTT	2786	False	NA	NA	False	AATAAA	-15	NA	56871831	56867027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_56867000_56871800
Isoform_135292_4	chr4	-	2395	1	ISM	ENSMUSG00000055296.15	ENSMUST00000068792.13	15981	18	78016	104	54037	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCGTTTCTTAGCTTT	5196	False	NA	NA	False	AATAAA	-16	NA	56869421	56867026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_56867000_56869400
Isoform_135293_20	chr15	-	175	1	Intergenic	novelGene_3815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGAAAACTA	NA	False	NA	NA	False	NA	NA	NA	29490615	29490440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_29490400_29490600
Isoform_135294_29	chr4	-	1919	1	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-5	-59895	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCAAAAAAAAGTCAGAAAA	0	True	NA	NA	False	AATAAA	-11	NA	56947429	56945510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_56945500_56947400
Isoform_135295_50	chr4	+	164	1	Intergenic	novelGene_7598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56964094	56964258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_56964100_56964300
Isoform_135296_5	chr4	+	174	1	Intergenic	novelGene_7408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	10909296	10909470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_10909300_10909500
Isoform_13531_161	chr11	-	1819	12	FSM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	16	2	-6	-2	multi-exon	FALSE	canonical	3	105	junction_11	44.7137821487915	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTATGTGGATAGT	258	False	NA	-9	True	AATAAA	-20	NA	61652872	61620481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652779
Isoform_135312_3	chr4	+	262	1	Intergenic	novelGene_7599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACCTAAAATAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	57374678	57374940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_57374700_57374900
Isoform_135313_4	chr4	-	232	1	Intergenic	novelGene_7600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAAAACAAAACACCCC	NA	False	NA	NA	False	NA	NA	NA	57792585	57792353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_57792400_57792600
Isoform_135315_5	chr4	+	3249	1	ISM	ENSMUSG00000089945.14	ENSMUST00000098066.9	7576	11	325535	20	255891	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAACGTGTATAGTG	630	False	NA	7	True	NA	NA	NA	57893713	57896962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_57893700_57897000
Isoform_135316_5	chr4	+	3089	1	ISM	ENSMUSG00000089945.14	ENSMUST00000098066.9	7576	11	325696	19	256052	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAACGTGTATAGTGT	148	False	NA	8	True	NA	NA	NA	57893874	57896963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_57893900_57897000
Isoform_135320_8	chr4	+	2221	1	ISM	ENSMUSG00000089945.14	ENSMUST00000098066.9	7576	11	326563	20	256919	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAACGTGTATAGTG	572	False	NA	7	True	NA	NA	NA	57894741	57896962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_57894700_57897000
Isoform_135321_4	chr4	+	181	1	Intergenic	novelGene_7601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAAAGAATAC	NA	False	NA	NA	False	NA	NA	NA	57919172	57919353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_57919200_57919400
Isoform_135322_16	chr4	-	170	1	Intergenic	novelGene_7602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGAGAAGAGAAA	9840	False	NA	NA	False	NA	NA	NA	57933977	57933807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_57933800_57934000
Isoform_135325_4	chr14	-	175	1	Intergenic	novelGene_3677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACCTATGTG	NA	False	NA	NA	False	NA	NA	NA	79917303	79917128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_79917100_79917300
Isoform_135326_3	chr4	+	174	1	Intergenic	novelGene_7603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAACTCC	NA	False	NA	NA	False	NA	NA	NA	58181600	58181774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_58181600_58181800
Isoform_135327_129	chr4	-	175	1	Intergenic	novelGene_7409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATGTC	NA	False	NA	NA	False	NA	NA	NA	11015888	11015713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11015700_11015900
Isoform_135332_8	chr4	+	175	1	Intergenic	novelGene_7604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGCTCAAATT	NA	False	NA	NA	False	NA	NA	NA	58882356	58882531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_58882400_58882500
Isoform_135333_4	chr4	+	159	1	Intergenic	novelGene_7410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	11038187	11038346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_11038200_11038300
Isoform_135334_37	chr4	-	181	1	Intergenic	novelGene_7605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTTTCAAAGTA	NA	False	NA	NA	False	NA	NA	NA	59001222	59001041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_59001000_59001200
Isoform_135337_2489	chr4	-	157	1	Intergenic	novelGene_7411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2489	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-54	True	NA	NA	NA	11046161	11046004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11046000_11046200
Isoform_135339_3	chr4	+	172	1	Intergenic	novelGene_7606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAATGGCTTACTTGC	NA	False	NA	NA	False	NA	NA	NA	59165926	59166098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_59165900_59166100
Isoform_135340_304	chr4	+	207	1	Intergenic	novelGene_7607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	225	False	NA	NA	False	NA	NA	NA	59197787	59197994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_59197800_59198000
Isoform_135341_13	chr4	-	951	1	Intergenic	novelGene_7608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGACTTGATGTGCA	NA	False	NA	NA	False	NA	NA	NA	59216319	59215368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_59215400_59216300
Isoform_135348_4	chr4	+	192	1	Intergenic	novelGene_7412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATACAAACCCAAAA	NA	False	NA	NA	False	NA	NA	NA	11066113	11066305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_11066100_11066300
Isoform_135350_152	chr4	-	173	1	Intergenic	novelGene_7609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59279195	59279022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_59279000_59279200
Isoform_135351_6	chr4	+	1475	1	Intergenic	novelGene_7610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59326864	59328339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_59326900_59328300
Isoform_135352_3	chr4	-	2695	1	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	262	-103720	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	14	True	NA	NA	False	NA	NA	NA	59438371	59435676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_59435700_59438400
Isoform_13536_56	chr11	-	1749	11	FSM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	16	6	-10	-2	multi-exon	FALSE	canonical	3	49	junction_10	57.9565354382058	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTATGTGGATAGT	232	False	NA	-9	True	AATAAA	-20	NA	61652898	61620481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652779
Isoform_13537_5	chr11	-	1887	12	NIC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	85.8872025988036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTATGTGGATAGT	232	False	NA	-9	True	AATAAA	-20	NA	61652898	61620481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652305_61652401_61652779
Isoform_13538_33	chr11	-	1759	11	FSM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	-29	4	-1	-4	multi-exon	FALSE	canonical	3	27	junction_8	65.5872701063248	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTCTGTATGTGGATA	263	False	NA	-11	True	AATAAA	-18	NA	61652867	61620483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652779
Isoform_13540_16	chr11	-	1673	10	NIC	ENSMUSG00000020528.15	novel	1771	11	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	77.5972508104078	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTATGTGGATAGT	255	False	NA	-9	True	AATAAA	-20	NA	61652875	61620481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61652779
Isoform_135402_5	chr4	+	181	1	Intergenic	novelGene_7611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAAGTCCTTGGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	59536732	59536913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_59536700_59536900
Isoform_135404_43	chr4	-	172	1	Intergenic	novelGene_7612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAAAAGACCTAGGAT	NA	False	NA	NA	False	NA	NA	NA	59620015	59619843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_59619800_59620000
Isoform_135405_35	chr4	-	177	1	Intergenic	novelGene_7613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	59654397	59654220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_59654200_59654400
Isoform_135406_4	chr4	-	166	1	Intergenic	novelGene_7413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAAAGGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	11076903	11076737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11076700_11076900
Isoform_135408_17	chr4	+	795	1	NIC	ENSMUSG00000028385.15	novel	7314	9	NA	NA	8	-27464	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGCAAGAGTTA	-24	True	NA	NA	False	NA	NA	NA	59805847	59806642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_59805800_59806600
Isoform_135414_18	chr4	+	219	1	Intergenic	novelGene_7414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATACA	9059	False	NA	NA	False	NA	NA	NA	11114455	11114674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_11114500_11114700
Isoform_135415_3	chr4	+	228	1	Intergenic	novelGene_7614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCATAGAAGAATCCCCA	NA	False	NA	NA	False	TATAAA	-24	NA	60104046	60104274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_60104000_60104300
Isoform_135416_5	chr4	+	171	1	Intergenic	novelGene_7615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61228569	61228740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_61228600_61228700
Isoform_135417_4	chr12	-	206	1	Intergenic	novelGene_2719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATACAG	NA	False	NA	NA	False	NA	NA	NA	84451402	84451196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84451200_84451400
Isoform_135419_4	chr4	-	179	1	Intergenic	novelGene_7616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATCCACATCAGT	NA	False	NA	NA	False	NA	NA	NA	61965246	61965067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_61965100_61965200
Isoform_135420_180	chr17	-	176	1	Intergenic	novelGene_5093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	66111995	66111819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66111800_66112000
Isoform_135421_4	chr4	-	220	1	Intergenic	novelGene_7617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCATAAATGTACAAGAACA	NA	False	NA	NA	False	AATAAA	-16	NA	62180303	62180083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_62180100_62180300
Isoform_135424_4	chr4	-	352	1	Intergenic	novelGene_7618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	5528	False	NA	NA	False	NA	NA	NA	62280173	62279821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_62279800_62280200
Isoform_135425_26	chr4	-	177	1	Intergenic	novelGene_7619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTAAGG	NA	False	NA	NA	False	NA	NA	NA	62286846	62286669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_62286700_62286800
Isoform_135426_45	chr4	-	233	1	Intergenic	novelGene_7415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCCCGTAAGAATCGCT	9889	False	NA	NA	False	AAGAAA	-37	NA	11146361	11146128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11146100_11146400
Isoform_13543_8	chr11	-	3909	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	-14	1848	-14	5	multi-exon	TRUE	canonical	3	9	junction_8	4.53666848543571	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTACAGTTATTCTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	61745913	61668322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
Isoform_135436_3	chr4	-	1670	1	Intergenic	novelGene_7416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-14	NA	11156320	11154650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11154600_11156300
Isoform_135437_13	chr4	+	177	1	Intergenic	novelGene_7620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAGCATTCTCTT	NA	False	NA	NA	False	NA	NA	NA	62373534	62373711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_62373500_62373700
Isoform_135442_25	chr4	-	224	1	Intergenic	novelGene_7621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	62398125	62397901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_62397900_62398100
Isoform_135445_25	chr4	+	179	1	Intergenic	novelGene_7622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTGTATT	NA	False	NA	NA	False	NA	NA	NA	62472844	62473023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_62472800_62473000
Isoform_135447_8	chr4	+	173	1	Intergenic	novelGene_7623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62800349	62800522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_62800300_62800500
Isoform_13545_346	chr11	-	3472	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	33	369	7	-4	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTGTCAACTTCCTG	NA	False	NA	NA	False	NA	NA	NA	61821045	61762501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
Isoform_13546_25	chr11	-	3553	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	-47	368	-47	-3	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGTCAACTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	61821125	61762500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
Isoform_13547_9	chr11	-	3740	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	39	95	-6	-95	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTGTCCTCTGCCTT	NA	False	NA	NA	False	CATAAA	-20	NA	61821039	61762227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
Isoform_135473_28	chr4	-	195	1	Intergenic	novelGene_7624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTCCAAGCCAACAG	NA	False	NA	NA	False	NA	NA	NA	62901553	62901358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_62901400_62901600
Isoform_135477_28	chr4	-	178	1	Intergenic	novelGene_7625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAGGATGAAA	NA	False	NA	NA	False	NA	NA	NA	64939935	64939757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_64939800_64939900
Isoform_135481_5	chr4	-	172	1	Intergenic	novelGene_7626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAGGATTGAA	NA	False	NA	NA	False	NA	NA	NA	65552035	65551863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_65551900_65552000
Isoform_135482_3	chr4	+	178	1	Intergenic	novelGene_7627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAATAAAATAGAT	NA	False	NA	NA	False	NA	NA	NA	66156601	66156779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_66156600_66156800
Isoform_135484_145	chr4	+	5173	1	Intergenic	novelGene_7628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCGTTTCTTGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	66820666	66825839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_66820700_66825800
Isoform_13549_157	chr11	-	723	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	8	1	8	-1	multi-exon	TRUE	canonical	3	218	junction_4	57.8986182909402	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGATCAAGTTATTGAAG	NA	False	NA	-16	True	AATAAA	-24	NA	62172193	62158050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
Isoform_135507_1633	chr4	-	970	1	FSM	ENSMUSG00000046341.6	ENSMUST00000120560.2	450	1	-91	-429	-91	429	mono-exon	FALSE	NA	NA	NA	NA	NA	1633	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	69844407	69843437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_69843400_69844400
Isoform_13551_61	chr11	-	598	3	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	132	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGATCAAGTTATTGAAG	NA	False	NA	-16	True	AATAAA	-24	NA	62172193	62158050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62158433_62159529_62159635_62172082
Isoform_135518_10	chr4	+	200	1	Intergenic	novelGene_7629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCCCCAAGGGGAATT	NA	False	NA	NA	False	NA	NA	NA	71444293	71444493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_71444300_71444500
Isoform_135519_32	chr4	+	177	1	Intergenic	novelGene_7419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7791	False	NA	NA	False	NA	NA	NA	11210202	11210379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_11210200_11210400
Isoform_13552_3	chr11	-	1058	2	ISM	ENSMUSG00000018501.18	ENSMUST00000159315.2	716	3	1826	-598	1826	-313	3prime_fragment	FALSE	canonical	3	481	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62210221	62207828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_62208857_62210191
Isoform_135520_8	chr4	+	816	1	Genic_Genomic	ENSMUSG00000084910.2	novel	NA	NA	NA	NA	-66	-13255	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGACCCGCCGGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	72119518	72120334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_72119500_72120300
Isoform_135521_70	chr4	+	190	1	Intergenic	novelGene_7630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAATCTAGATGTCTGC	NA	False	NA	NA	False	NA	NA	NA	72125885	72126075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_72125900_72126100
Isoform_135522_3	chr4	+	165	1	Intergenic	novelGene_7631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	72148483	72148648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_72148500_72148600
Isoform_135524_3	chr4	-	171	1	Intergenic	novelGene_7632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	72353948	72353777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_72353800_72353900
Isoform_135527_4	chr4	-	170	1	Intergenic	novelGene_7633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74162274	74162104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_74162100_74162300
Isoform_13553_3	chr11	-	1281	3	ISM	ENSMUSG00000018501.18	ENSMUST00000156740.9	4215	23	37944	-794	150	-313	3prime_fragment	FALSE	canonical	3	472	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62211897	62207828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_62208857_62210191_62210369_62211821
Isoform_135530_6	chr4	-	180	1	Intergenic	novelGene_7634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	74205460	74205280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_74205300_74205500
Isoform_135533_39	chr4	-	198	1	Intergenic	novelGene_7635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGAAGACGGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	74772690	74772492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_74772500_74772700
Isoform_135534_112	chr4	+	155	1	Intergenic	novelGene_7420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	11250891	11251046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_11250900_11251000
Isoform_135539_9	chr4	+	235	1	Intergenic	novelGene_7421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAACTAAAAAGCATGG	NA	False	NA	NA	False	NA	NA	NA	11254569	11254804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_11254600_11254800
Isoform_13554_3	chr11	-	1349	3	ISM	ENSMUSG00000018501.18	ENSMUST00000156740.9	4215	23	37873	-791	79	-316	3prime_fragment	FALSE	canonical	3	472	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62211968	62207831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_62208857_62210191_62210369_62211821
Isoform_135540_3	chr4	+	3884	1	Intergenic	novelGene_7636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	78431653	78435537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_78431700_78435500
Isoform_135541_3	chr4	-	179	1	Intergenic	novelGene_7637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAAAGGGAAATAC	NA	False	NA	NA	False	NA	NA	NA	79100578	79100399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_79100400_79100600
Isoform_135545_33	chr4	-	172	1	Intergenic	novelGene_7638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79769352	79769180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_79769200_79769400
Isoform_135549_12	chr4	+	178	1	Intergenic	novelGene_7639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTCACAAGGCA	NA	False	NA	NA	False	NA	NA	NA	81873829	81874007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_81873800_81874000
Isoform_135550_4	chr4	+	2477	1	Intergenic	novelGene_7640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82229953	82232430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_82230000_82232400
Isoform_135551_3	chr4	+	358	1	Intergenic	novelGene_7422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTAAGTTACTT	NA	False	NA	NA	False	NA	NA	NA	11291306	11291664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_11291300_11291700
Isoform_135552_3	chr4	-	223	1	Intergenic	novelGene_7641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAATCTGTAGATTGCT	4290	False	NA	NA	False	NA	NA	NA	82701614	82701391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_82701400_82701600
Isoform_135560_17	chr4	-	190	1	Intergenic	novelGene_7423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGACAAGTACCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	11309259	11309069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11309100_11309300
Isoform_135561_27	chr4	+	177	1	Intergenic	novelGene_7642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACTATGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	82813953	82814130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_82814000_82814100
Isoform_135567_7	chr4	+	175	1	Intergenic	novelGene_7643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	83159616	83159791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_83159600_83159800
Isoform_135568_13	chr19	-	177	1	Intergenic	novelGene_5828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43622565	43622388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_43622400_43622600
Isoform_135569_5	chr4	-	177	1	Intergenic	novelGene_7644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	83222534	83222357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_83222400_83222500
Isoform_135571_9	chr4	+	205	1	Intergenic	novelGene_7645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	83231912	83232117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_83231900_83232100
Isoform_135573_5	chr4	-	177	1	Intergenic	novelGene_7424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATCTAGTAATG	NA	False	NA	NA	False	NA	NA	NA	11361503	11361326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11361300_11361500
Isoform_135574_12	chr4	-	206	1	Intergenic	novelGene_7646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTGATGTGTG	6524	False	NA	NA	False	NA	NA	NA	83259535	83259329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_83259300_83259500
Isoform_135575_19	chr4	-	3109	1	Intergenic	novelGene_7647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAGCTTCATGTAGGA	4287	False	NA	NA	False	NA	NA	NA	83280905	83277796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_83277800_83280900
Isoform_135576_4	chr4	+	176	1	Intergenic	novelGene_7648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAAGGTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	83280945	83281121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_83280900_83281100
Isoform_135578_5	chr4	+	196	1	Intergenic	novelGene_7649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	83326985	83327181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_83327000_83327200
Isoform_135580_15	chr4	+	218	1	Intergenic	novelGene_7650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAGAAAAGA	5088	False	NA	NA	False	NA	NA	NA	83347343	83347561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_83347300_83347600
Isoform_135581_9	chr4	-	1994	1	Intergenic	novelGene_7651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	83358101	83356107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_83356100_83358100
Isoform_135584_12	chr4	+	167	1	Intergenic	novelGene_7425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	11373274	11373441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_11373300_11373400
Isoform_135590_3	chr4	+	1334	1	NIC	ENSMUSG00000052407.18	novel	4525	26	NA	NA	-18	-28449	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAAATAGCAT	8740	False	NA	NA	False	NA	NA	NA	83443832	83445166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_83443800_83445200
Isoform_135591_19	chr4	+	173	1	Intergenic	novelGene_7652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	83481660	83481833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_83481700_83481800
Isoform_135592_48	chr4	-	165	1	Intergenic	novelGene_7653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATCTTTTTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	83504965	83504800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_83504800_83505000
Isoform_135596_10	chr4	-	177	1	Intergenic	novelGene_7654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGCCATAATGAATC	NA	False	NA	NA	False	NA	NA	NA	85254401	85254224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_85254200_85254400
Isoform_135599_55	chrX	+	175	1	Intergenic	novelGene_11927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGAGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	38487877	38488052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_38487900_38488100
Isoform_135600_70	chr4	-	183	1	Intergenic	novelGene_7656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGTGTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	86103480	86103297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_86103300_86103500
Isoform_135602_43	chr4	-	176	1	Intergenic	novelGene_7426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	11484801	11484625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11484600_11484800
Isoform_135603_763	chr4	+	1600	1	FSM	ENSMUSG00000070934.7	ENSMUST00000091064.8	1618	1	15	3	15	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	763	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGTTTGAAATAATT	NA	False	NA	16	True	AATAAA	-16	NA	86493919	86495519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_86493900_86495500
Isoform_135609_3	chr4	+	2908	1	Antisense	novelGene_ENSMUSG00000088958.3_AS_novelGene_ENSMUSG00000038047.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAATAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	86503586	86506494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_86503600_86506500
Isoform_13561_3	chr11	-	3754	16	ISM	ENSMUSG00000018501.18	ENSMUST00000101066.10	8852	45	95425	579	1811	-315	3prime_fragment	FALSE	canonical	3	146	junction_14	84.2861791754734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62233916	62207830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822
Isoform_135613_6	chr4	-	176	1	Intergenic	novelGene_7657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGCTTTATACC	4023	False	NA	NA	False	NA	NA	NA	86656186	86656010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_86656000_86656200
Isoform_135616_7	chr4	-	166	1	Intergenic	novelGene_7427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAACCCAACAACAGGG	NA	False	NA	NA	False	NA	NA	NA	11517776	11517610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11517600_11517800
Isoform_13562_3	chr11	-	4805	22	ISM	ENSMUSG00000018501.18	ENSMUST00000101066.10	8852	45	84105	581	-3020	-317	3prime_fragment	FALSE	canonical	3	146	junction_14	76.0855229509602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTACAGTACATCATT	NA	False	NA	-18	True	AATAAA	-17	NA	62245236	62207832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196
Isoform_135620_17	chr4	-	196	1	Intergenic	novelGene_7659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAGAATTAACACCAA	2499	False	NA	NA	False	NA	NA	NA	87159187	87158991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_87159000_87159200
Isoform_135625_49	chr4	-	182	1	Intergenic	novelGene_7660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	88062830	88062648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_88062600_88062800
Isoform_135628_222	chr4	-	4172	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTGTATTGCTTTT	NA	False	NA	-3	True	NA	NA	NA	88640702	88636530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_88636500_88640700
Isoform_135641_16	chr4	-	177	1	Intergenic	novelGene_7661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	88885628	88885451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_88885500_88885600
Isoform_135642_4	chr4	-	3542	1	FSM	ENSMUSG00000083989.3	ENSMUST00000120724.3	493	1	-3025	-24	-3025	24	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	89083453	89079911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_89079900_89083500
Isoform_135645_7	chr4	-	1496	1	FSM	ENSMUSG00000088504.4	ENSMUST00000157879.4	140	1	-633	-723	-633	723	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCCTCCTAGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	89101990	89100494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_89100500_89102000
Isoform_135646_4	chr4	-	167	1	Intergenic	novelGene_7662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAGAA	740	False	NA	NA	False	NA	NA	NA	89127487	89127320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_89127300_89127500
Isoform_135647_14	chr4	+	195	1	Intergenic	novelGene_7663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTTTTAAAATAAAAAAAAA	2909	False	NA	NA	False	NA	NA	NA	89185201	89185396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_89185200_89185400
Isoform_135648_6	chr4	-	448	1	NIC	ENSMUSG00000044303.7	novel	895	3	NA	NA	91	-19574	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAGAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	89212799	89212351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_89212400_89212800
Isoform_135649_4	chr4	+	2927	1	Intergenic	novelGene_7664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATAAAAAACAAAACCA	NA	False	NA	NA	False	NA	NA	NA	89213119	89216046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_89213100_89216000
Isoform_135650_14	chr4	-	177	1	Intergenic	novelGene_7665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGTAAATGAGTAGC	NA	False	NA	NA	False	NA	NA	NA	89624027	89623850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_89623800_89624000
Isoform_135652_6	chr4	-	165	1	Intergenic	novelGene_7428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGGTGAACTAC	NA	False	NA	NA	False	NA	NA	NA	11560325	11560160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_11560200_11560300
Isoform_135657_3	chr4	-	1370	1	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-3	9764	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAACAAAA	NA	False	NA	NA	False	AAAACA	-43	NA	91260274	91258904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_91258900_91260300
Isoform_13566_3	chr11	-	3736	16	ISM	ENSMUSG00000018501.18	ENSMUST00000155712.9	6328	28	35460	303	1844	-303	3prime_fragment	FALSE	canonical	3	206	junction_14	74.3085459419036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTTGTGACGTAAAGAG	NA	False	NA	-4	True	AATAAA	-31	NA	62233883	62207818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822
Isoform_135661_6036	chr4	-	1255	1	FSM	ENSMUSG00000095937.2	ENSMUST00000119978.2	1002	1	-72	-181	-72	181	mono-exon	FALSE	NA	NA	NA	NA	NA	6036	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	91740978	91739723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_91739700_91741000
Isoform_135673_6	chr4	-	1247	1	FSM	ENSMUSG00000054000.6	ENSMUST00000066774.6	1374	1	122	5	122	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTCCATGACTGTTA	NA	False	NA	0	True	AATAAA	-17	NA	93223626	93222379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_93222400_93223600
Isoform_135674_3	chr4	-	1368	1	FSM	ENSMUSG00000054000.6	ENSMUST00000066774.6	1374	1	-3	9	-3	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAAAATTTCCATGACT	NA	False	NA	-4	True	AATAAA	-13	NA	93223751	93222383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_93222400_93223800
Isoform_135675_4	chr4	+	172	1	Intergenic	novelGene_7666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	94421162	94421334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_94421200_94421300
Isoform_135677_229	chr9	-	177	1	Intergenic	novelGene_11528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAGAATGAA	5918	False	NA	NA	False	NA	NA	NA	78475819	78475642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78475600_78475800
Isoform_135678_22	chr12	+	152	1	Intergenic	novelGene_2501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	31288526	31288678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_31288500_31288700
Isoform_135679_19	chr4	+	192	1	Intergenic	novelGene_7668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTAAGAGTTTGTGACTA	NA	False	NA	NA	False	NA	NA	NA	94578260	94578452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_94578300_94578500
Isoform_135681_45	chr4	+	2857	1	Antisense	novelGene_ENSMUSG00000062627.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94831349	94834206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_94831300_94834200
Isoform_135682_3	chr4	-	3143	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	22	24	22	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGGTTTTTAAAATCT	5531	False	NA	NA	False	AATAAA	-9	NA	94940437	94937294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94937300_94940400
Isoform_135683_5	chr4	-	2664	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	22	503	22	-503	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCCCCAACCTCTTTGC	5531	False	NA	NA	False	AATAAA	-11	NA	94940437	94937773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94937800_94940400
Isoform_135684_17	chr4	-	2603	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	22	564	22	-564	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTTTCTGAAAATTT	5531	False	NA	NA	False	AATAAA	-17	NA	94940437	94937834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94937800_94940400
Isoform_135685_9	chr4	-	2625	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	0	564	0	-564	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTTTCTGAAAATTT	5509	False	NA	NA	False	AATAAA	-17	NA	94940459	94937834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94937800_94940500
Isoform_135686_20	chr4	-	2504	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	21	664	21	-664	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTTTGTTTGTTTGG	5530	False	NA	1	True	AATAAA	-24	NA	94940438	94937934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_94937900_94940400
Isoform_13569_45	chr11	-	1842	16	NIC	ENSMUSG00000018501.18	novel	1695	15	NA	NA	2	-27	combination_of_known_junctions	FALSE	canonical	3	168	junction_7	105.040732839959	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAGAGAAAAAGGAAG	NA	False	NA	-66	True	GATAAA	-6	NA	62348147	62275609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
Isoform_135692_7	chr4	-	176	1	Intergenic	novelGene_7669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	96464197	96464021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_96464000_96464200
Isoform_135693_9	chr4	+	172	1	Intergenic	novelGene_7670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCTTTTTAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	96576372	96576544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_96576400_96576500
Isoform_135695_4	chr4	-	790	1	NIC	ENSMUSG00000028563.17	novel	1027	7	NA	NA	-12	-26864	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	98271495	98270705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_98270700_98271500
Isoform_135696_20	chr4	-	176	1	Intergenic	novelGene_7671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGACATGCA	NA	False	NA	NA	False	NA	NA	NA	98301132	98300956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_98301000_98301100
Isoform_135698_3	chr4	+	194	1	Intergenic	novelGene_7672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCAGTGTGTCAA	NA	False	NA	NA	False	NA	NA	NA	98584116	98584310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_98584100_98584300
Isoform_13571_30	chr11	-	1816	15	ISM	ENSMUSG00000018501.18	ENSMUST00000018645.13	9037	46	10	68358	1	-27	5prime_fragment	FALSE	canonical	3	140	junction_7	111.224630218971	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAGAGAAAAAGGAAG	NA	False	NA	-66	True	GATAAA	-6	NA	62348148	62275609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
Isoform_135716_3	chr4	+	3964	1	Intergenic	novelGene_7673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	3798	False	NA	NA	False	TTTAAA	-31	NA	98669640	98673604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_98669600_98673600
Isoform_135718_39	chr4	+	178	1	Intergenic	novelGene_7674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACAGATTAGCAT	NA	False	NA	NA	False	NA	NA	NA	98679845	98680023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_98679800_98680000
Isoform_135719_203	chr4	+	163	1	Intergenic	novelGene_7675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAAAAAGGCATG	9526	False	NA	NA	False	NA	NA	NA	98743476	98743639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_98743500_98743600
Isoform_135723_8	chr4	-	176	1	Intergenic	novelGene_7676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	2546	False	NA	NA	False	NA	NA	NA	98815150	98814974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_98815000_98815200
Isoform_135728_52	chr4	-	179	1	Intergenic	novelGene_7677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAGATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	98826787	98826608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_98826600_98826800
Isoform_135729_5	chr4	+	187	1	Intergenic	novelGene_7678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATATATTAATATATT	NA	False	NA	NA	False	NA	NA	NA	98847664	98847851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_98847700_98847900
Isoform_13573_19	chr11	-	1847	16	NIC	ENSMUSG00000018501.18	novel	1695	15	NA	NA	0	-27	combination_of_known_junctions	FALSE	canonical	3	109	junction_1	115.703759662338	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAGAGAAAAAGGAAG	NA	False	NA	-66	True	GATAAA	-6	NA	62348149	62275609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
Isoform_135730_9	chr4	+	707	1	Intergenic	novelGene_7679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	98887508	98888215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_98887500_98888200
Isoform_135731_4	chr4	+	209	1	Intergenic	novelGene_7680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTAAGTCAAAACACCA	NA	False	NA	NA	False	NA	NA	NA	98901565	98901774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_98901600_98901800
Isoform_135732_5	chr4	-	208	1	Antisense	novelGene_ENSMUSG00000087395.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	99006049	99005841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_99005800_99006000
Isoform_135733_5	chr4	+	179	1	Intergenic	novelGene_7681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTTATTTTATT	NA	False	NA	NA	False	NA	NA	NA	99056269	99056448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_99056300_99056400
Isoform_135734_12	chr4	+	203	1	Intergenic	novelGene_7682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTTTACACTAATTT	NA	False	NA	NA	False	NA	NA	NA	99075553	99075756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_99075600_99075800
Isoform_135736_5	chr4	-	178	1	Intergenic	novelGene_7683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGCAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	99350933	99350755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_99350800_99350900
Isoform_135738_8	chr4	+	176	1	Intergenic	novelGene_7684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGCAAATAGATA	NA	False	NA	NA	False	NA	NA	NA	99491987	99492163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_99492000_99492200
Isoform_13574_8	chr11	-	1827	15	NIC	ENSMUSG00000018501.18	novel	2815	20	NA	NA	-2	-22	combination_of_known_junctions	FALSE	canonical	3	109	junction_1	122.161005335131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGAGAAAAAGGAAGAAGAA	NA	False	NA	-61	True	GATAAA	-11	NA	62348151	62275604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
Isoform_135740_30	chr4	+	176	1	Intergenic	novelGene_7685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99520778	99520954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_99520800_99521000
Isoform_135741_11	chr4	+	152	1	Intergenic	novelGene_7686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99529105	99529257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_99529100_99529300
Isoform_135742_217	chr4	+	186	1	Intergenic	novelGene_7687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTAAGGGTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	99537447	99537633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_99537400_99537600
Isoform_135746_3	chr4	-	2332	1	Antisense	novelGene_ENSMUSG00000067261.5_AS_novelGene_ENSMUSG00002076832.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTACTATTTTGATTTGC	NA	False	NA	NA	False	NA	NA	NA	99546252	99543920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_99543900_99546300
Isoform_135750_3	chr4	+	2724	1	FSM	ENSMUSG00000067261.5	ENSMUST00000087285.5	2324	1	-352	-48	-352	48	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCTAGTGTTTTAATTA	NA	False	NA	3	True	AATAAA	-13	NA	99544183	99546907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99544200_99546900
Isoform_135751_148	chr4	+	2535	1	FSM	ENSMUSG00000067261.5	ENSMUST00000087285.5	2324	1	-161	-50	-161	50	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGTGTTTTAATTAGG	NA	False	NA	5	True	AATAAA	-15	NA	99544374	99546909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_99544400_99546900
Isoform_135757_129	chr4	+	167	1	Intergenic	novelGene_7688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAACAATTGCAGG	NA	False	NA	NA	False	NA	NA	NA	99565937	99566104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_99565900_99566100
Isoform_135759_3	chr4	-	163	1	Intergenic	novelGene_7689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAACTATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99582297	99582134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_99582100_99582300
Isoform_135760_8	chr4	+	226	1	Intergenic	novelGene_7690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTCTTTTTTAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	99605364	99605590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_99605400_99605600
Isoform_135763_11	chr4	+	238	1	Intergenic	novelGene_7691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99681672	99681910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_99681700_99681900
Isoform_135764_16	chr4	-	180	1	Intergenic	novelGene_7692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGATAATCATTAAC	NA	False	NA	NA	False	NA	NA	NA	99742470	99742290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_99742300_99742500
Isoform_135767_15	chr3	-	178	1	Intergenic	novelGene_6970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	34818084	34817906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_34817900_34818100
Isoform_135768_15	chr4	+	2497	1	Genic_Genomic	ENSMUSG00000028532.15	novel	NA	NA	NA	NA	-2	-223892	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAAGCTGGAG	NA	False	NA	NA	False	TTTAAA	-6	NA	100633869	100636366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_100633900_100636400
Isoform_135769_7	chr4	+	179	1	Intergenic	novelGene_7693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAATT	NA	False	NA	NA	False	NA	NA	NA	100657457	100657636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_100657500_100657600
Isoform_135776_3	chr4	-	193	1	Intergenic	novelGene_7694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACCATGAAATAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	100987621	100987428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_100987400_100987600
Isoform_135777_51	chr4	-	2210	1	FSM	ENSMUSG00000065451.3	ENSMUST00000083517.3	83	1	72	-2199	72	2199	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCGTGTATCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	101204152	101201942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_101201900_101204200
Isoform_135779_5	chr4	+	165	1	Intergenic	novelGene_7695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATATATTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	101229574	101229739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_101229600_101229700
Isoform_135780_27	chr4	+	3222	1	FSM	ENSMUSG00000083246.2	ENSMUST00000120647.2	1953	1	-933	-336	-933	336	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	12113350	12116572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_12113400_12116600
Isoform_135799_16	chr4	+	3276	1	FSM	ENSMUSG00000081593.2	ENSMUST00000117060.2	1963	1	-980	-333	-980	333	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGAACTGAAC	8	False	NA	NA	False	AATAAA	-20	NA	12124309	12127585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_12124300_12127600
Isoform_135807_19	chr4	+	2465	1	Intergenic	novelGene_7696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101711714	101714179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_101711700_101714200
Isoform_135809_249	chr4	-	177	1	Intergenic	novelGene_7698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCATTCT	2372	False	NA	NA	False	NA	NA	NA	101901319	101901142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_101901100_101901300
Isoform_135812_50	chr4	+	209	1	Intergenic	novelGene_7699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAGGCCAAATTCCATAA	NA	False	NA	NA	False	NA	NA	NA	102883345	102883554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_102883300_102883600
Isoform_135813_11	chr4	+	173	1	Intergenic	novelGene_7700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	103012293	103012466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_103012300_103012500
Isoform_135818_16	chr4	-	175	1	Intergenic	novelGene_7701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAGAGAAGAGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	103176123	103175948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_103175900_103176100
Isoform_135819_50	chr4	+	178	1	Intergenic	novelGene_7702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103336130	103336308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_103336100_103336300
Isoform_135821_9	chr4	+	745	1	FSM	ENSMUSG00000059195.11	ENSMUST00000121430.2	1128	1	-71	454	-71	-454	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGCTACTGCTGCAT	NA	False	NA	NA	False	CATAAA	-37	NA	103420527	103421272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_103420500_103421300
Isoform_135822_3	chr4	+	1863	1	FSM	ENSMUSG00000059195.11	ENSMUST00000121430.2	1128	1	-16	-719	-16	719	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATGTCTTCAAGA	NA	False	NA	NA	False	AATAAA	-37	NA	103420582	103422445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_103420600_103422400
Isoform_135824_4	chr4	+	792	1	FSM	ENSMUSG00000059195.11	ENSMUST00000121430.2	1128	1	1060	-724	1060	724	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTCTTCAAGAGATAT	NA	False	NA	NA	False	AATAAA	-42	NA	103421658	103422450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_103421700_103422400
Isoform_135832_16	chr4	+	811	1	FSM	ENSMUSG00000060989.9	ENSMUST00000125165.2	1119	1	692	-384	692	384	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	383	False	NA	NA	False	NA	NA	NA	12233524	12234335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_12233500_12234300
Isoform_135837_5	chr4	+	1967	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	730	1624	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCTAGTATTTCAATTTG	421	False	NA	8	True	AATAAA	-15	NA	12233562	12235575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_12235271_12235316
Isoform_135838_19	chr4	+	4433	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	730	4092	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	421	False	NA	NA	False	ATTAAA	-33	NA	12233562	12238043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_12235271_12235318
Isoform_13584_153	chr11	-	3172	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	2	-3	2	3	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCACCATAAATTTTTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	62348147	62292205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
Isoform_135852_4	chr1	+	329	1	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	9645929	9646258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_9645900_9646300
Isoform_13587_29	chr11	-	4228	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	-6	-1051	3	1051	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTGTTCCATGTATTA	NA	False	NA	NA	False	AATAAA	-15	NA	62348155	62291157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
Isoform_135872_284	chr2	+	176	1	Intergenic	novelGene_6261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62877604	62877780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_62877600_62877800
Isoform_135878_42	chr4	-	164	1	Intergenic	novelGene_7703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	105461946	105461782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_105461800_105461900
Isoform_135879_6	chr4	-	178	1	Intergenic	novelGene_7704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGAAGAAGAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	106119200	106119022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_106119000_106119200
Isoform_135896_23	chr4	+	4171	1	NIC	ENSMUSG00000043572.8	novel	2191	2	NA	NA	5	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTGTGTGTGTGTGT	NA	False	NA	4	True	AATAAA	-19	NA	106508307	106512478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_106508300_106512500
Isoform_135899_10	chr4	-	244	1	Intergenic	novelGene_7705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTGATTCGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	106622308	106622064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_106622100_106622300
Isoform_135900_4	chr4	+	175	1	Intergenic	novelGene_7706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTGTTTTG	8331	False	NA	NA	False	NA	NA	NA	106630866	106631041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_106630900_106631000
Isoform_135901_6	chr4	+	189	1	Intergenic	novelGene_7707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	106707112	106707301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_106707100_106707300
Isoform_135902_3	chr4	+	176	1	Intergenic	novelGene_7708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGAGA	46	False	NA	NA	False	NA	NA	NA	106733936	106734112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_106733900_106734100
Isoform_135903_68	chr4	-	182	1	Intergenic	novelGene_7709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAAAATAAA	863	False	NA	NA	False	NA	NA	NA	106737157	106736975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_106737000_106737200
Isoform_135904_17	chr4	-	167	1	Intergenic	novelGene_7710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTAAAAATGAGATTT	NA	False	NA	NA	False	NA	NA	NA	106763725	106763558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_106763600_106763700
Isoform_135905_95	chr4	-	179	1	Intergenic	novelGene_7711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	106782767	106782588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_106782600_106782800
Isoform_135906_4	chr4	-	2935	1	Intergenic	novelGene_7429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13857741	13854806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_13854800_13857700
Isoform_135907_5	chr2	-	172	1	Intergenic	novelGene_6570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130329423	130329251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_130329300_130329400
Isoform_135910_17	chr4	-	176	1	Intergenic	novelGene_7712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAATTGAC	NA	False	NA	NA	False	NA	NA	NA	106931357	106931181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_106931200_106931400
Isoform_135911_3	chr4	+	2985	1	Intergenic	novelGene_7713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	7038	False	NA	NA	False	AATAAA	-45	NA	107016751	107019736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_107016800_107019700
Isoform_135917_6	chr4	-	374	1	Intergenic	novelGene_7715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	107222445	107222071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_107222100_107222400
Isoform_135918_203	chr4	-	172	1	Intergenic	novelGene_7716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	107222444	107222272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_107222300_107222400
Isoform_135919_3	chr4	+	157	1	Intergenic	novelGene_7717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGACTGAAGCCAGACT	NA	False	NA	NA	False	NA	NA	NA	107222843	107223000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_107222800_107223000
Isoform_135920_181	chr4	+	176	1	Intergenic	novelGene_7718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	107224458	107224634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_107224500_107224600
Isoform_135922_5	chr4	-	4648	1	Antisense	novelGene_ENSMUSG00000028614.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGTGATATGTACAAT	NA	False	NA	NA	False	NA	NA	NA	107239432	107234784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_107234800_107239400
Isoform_135932_12	chr2	-	186	1	Intergenic	novelGene_6879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	179895540	179895354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_179895400_179895500
Isoform_135933_3	chr4	-	173	1	Intergenic	novelGene_7430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATGCAACC	NA	False	NA	NA	False	NA	NA	NA	14404855	14404682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_14404700_14404900
Isoform_135934_68	chr4	+	177	1	Intergenic	novelGene_7719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACACATCT	5643	False	NA	NA	False	NA	NA	NA	107789353	107789530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_107789400_107789500
Isoform_135935_12	chr4	-	178	1	Intergenic	novelGene_7720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCACTGCAAGG	NA	False	NA	NA	False	NA	NA	NA	107791627	107791449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_107791400_107791600
Isoform_135936_7	chr4	-	194	1	Intergenic	novelGene_7721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTCTGAGTTAAAGTG	970	False	NA	NA	False	NA	NA	NA	107802715	107802521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_107802500_107802700
Isoform_135939_10	chr4	+	177	1	Intergenic	novelGene_7722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	107942101	107942278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_107942100_107942300
Isoform_135940_33	chr4	+	203	1	Intergenic	novelGene_7723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGAGAGAACAAGCCCA	6557	False	NA	NA	False	NA	NA	NA	107975180	107975383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_107975200_107975400
Isoform_135942_3	chr4	+	187	1	Intergenic	novelGene_7724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAACATTCTATTTTTTG	NA	False	NA	NA	False	NA	NA	NA	108000446	108000633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108000400_108000600
Isoform_135944_7	chr4	-	2663	1	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACCAAAACAA	2972	False	NA	NA	False	NA	NA	NA	108029111	108026448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_108026400_108029100
Isoform_135953_6	chr4	-	1952	1	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTATGAGTGTCTATG	NA	False	NA	-7	True	ATTAAA	-18	NA	108034249	108032297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_108032300_108034200
Isoform_135957_5	chr4	-	3548	1	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTATGAGTGTCTAT	NA	False	NA	-8	True	ATTAAA	-17	NA	108035846	108032298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_108032300_108035800
Isoform_135958_3	chr4	-	5255	1	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACATATTCTACTTCTTA	NA	False	NA	-19	True	ATTAAA	-6	NA	108037564	108032309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_108032300_108037600
Isoform_13596_1193	chr11	-	1014	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	20	-2	20	2	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATGACATATTTCTTT	8391	False	NA	-12	True	AATAAA	-21	NA	62430067	62415769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
Isoform_135961_3	chr4	-	5382	1	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTATGAGTGTCTATG	NA	False	NA	-7	True	ATTAAA	-18	NA	108037679	108032297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_108032300_108037700
Isoform_135963_10	chr4	+	178	1	Intergenic	novelGene_7725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAATATAAGATT	NA	False	NA	NA	False	NA	NA	NA	108054586	108054764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108054600_108054800
Isoform_135964_33	chr4	-	177	1	Intergenic	novelGene_7726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8298	False	NA	NA	False	NA	NA	NA	108063349	108063172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108063200_108063300
Isoform_135965_27	chr4	-	177	1	Intergenic	novelGene_7727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATGTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108085143	108084966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108085000_108085100
Isoform_135968_8	chr4	+	175	1	Intergenic	novelGene_7728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	108132702	108132877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108132700_108132900
Isoform_13597_23	chr11	-	1057	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	-12	-13	-12	13	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTTGAACTTTGACT	8359	False	NA	-1	True	AATAAA	-32	NA	62430099	62415758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
Isoform_135971_14	chr4	-	152	1	Intergenic	novelGene_7729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACATATAATAAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	108163945	108163793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108163800_108163900
Isoform_135972_8	chr4	+	199	1	Intergenic	novelGene_7730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTTTATTTTAAGTGC	NA	False	NA	NA	False	NA	NA	NA	108181668	108181867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108181700_108181900
Isoform_135973_18	chr4	-	193	1	Intergenic	novelGene_7731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCTCTGCCTGGCAAA	NA	False	NA	NA	False	NA	NA	NA	108186726	108186533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108186500_108186700
Isoform_135974_22	chr4	-	170	1	Intergenic	novelGene_7732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATTTTTTGAGC	NA	False	NA	NA	False	NA	NA	NA	108190386	108190216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108190200_108190400
Isoform_135978_4	chr4	-	327	1	Intergenic	novelGene_7733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108263095	108262768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108262800_108263100
Isoform_135980_42	chr4	+	189	1	Intergenic	novelGene_7734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	108273907	108274096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108273900_108274100
Isoform_135983_5	chr4	-	175	1	Intergenic	novelGene_7735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAAGCCACAC	NA	False	NA	NA	False	NA	NA	NA	108324586	108324411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108324400_108324600
Isoform_135985_399	chr4	-	178	1	Intergenic	novelGene_7736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	399	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	108355758	108355580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108355600_108355800
Isoform_135988_15	chr4	+	207	1	Intergenic	novelGene_7431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATATAAATGCCTGAGA	NA	False	NA	NA	False	NA	NA	NA	14827327	14827534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_14827300_14827500
Isoform_135990_41	chr4	+	175	1	Intergenic	novelGene_7737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	9208	False	NA	NA	False	NA	NA	NA	108440586	108440761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108440600_108440800
Isoform_135993_29	chr4	-	159	1	Intergenic	novelGene_7739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	108518312	108518153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108518200_108518300
Isoform_135995_8	chr4	+	1943	1	Intergenic	novelGene_7740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108566950	108568893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108567000_108568900
Isoform_135996_39	chr4	-	166	1	Intergenic	novelGene_7741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATCTAAT	NA	False	NA	NA	False	NA	NA	NA	108582025	108581859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_108581900_108582000
Isoform_135998_46	chr4	+	175	1	Intergenic	novelGene_7742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTCATGT	NA	False	NA	NA	False	NA	NA	NA	108617274	108617449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108617300_108617400
Isoform_135999_4	chr4	+	182	1	Intergenic	novelGene_7743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTAAAAAAAGCATG	NA	False	NA	NA	False	NA	NA	NA	108666413	108666595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108666400_108666600
Isoform_136_2278	ERCC-00113	+	823	1	FSM	ERCC-00113A	DQ883663	825	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00113_+_0_800
Isoform_136002_405	chr4	+	1550	1	FSM	ENSMUSG00000073775.5	ENSMUST00000102738.4	1629	1	73	6	73	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	405	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTACCTGCTGGTCTCTT	NA	False	NA	3	True	AATAAA	-9	NA	108705054	108706604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_108705100_108706600
Isoform_136005_85	chr4	+	173	1	Intergenic	novelGene_7744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAATTGCAAG	NA	False	NA	NA	False	NA	NA	NA	108760809	108760982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108760800_108761000
Isoform_136006_9	chr4	+	177	1	Intergenic	novelGene_7745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATCTAAAAAAAAA	5789	False	NA	NA	False	NA	NA	NA	108948141	108948318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108948100_108948300
Isoform_136008_5	chr4	+	2845	1	Intergenic	novelGene_7746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGAGCT	NA	False	NA	NA	False	NA	NA	NA	109045008	109047853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_109045000_109047900
Isoform_136009_3	chr4	-	1745	1	NIC	ENSMUSG00000028559.18	novel	2871	24	NA	NA	-1	-28691	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATATATTAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	109059434	109057689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_109057700_109059400
Isoform_136010_14	chr4	+	172	1	Intergenic	novelGene_7432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTTAAAAAAAAAAAAAAAA	7140	False	NA	NA	False	NA	NA	NA	14921593	14921765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_14921600_14921800
Isoform_136011_18	chr4	-	176	1	Intergenic	novelGene_7747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	109157006	109156830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_109156800_109157000
Isoform_136012_3	chr4	-	187	1	Intergenic	novelGene_7748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTTCACTTAGTAACC	NA	False	NA	NA	False	NA	NA	NA	109227217	109227030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_109227000_109227200
Isoform_136014_5	chr4	-	178	1	Intergenic	novelGene_7433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	14948161	14947983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_14948000_14948200
Isoform_136015_21	chr4	+	181	1	Intergenic	novelGene_7749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGATCACAGGTATGC	NA	False	NA	NA	False	NA	NA	NA	109529535	109529716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_109529500_109529700
Isoform_136016_5	chr4	+	357	1	Intergenic	novelGene_7750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAAACAACTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	109529535	109529892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_109529500_109529900
Isoform_136018_77	chr4	-	2416	1	FSM	ENSMUSG00000083995.2	ENSMUST00000120597.2	404	1	-1204	-808	-1204	808	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	109613218	109610802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_109610800_109613200
Isoform_136020_3	chr4	+	156	1	Intergenic	novelGene_7751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	110317001	110317157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_110317000_110317200
Isoform_136023_17	chr4	-	185	1	Intergenic	novelGene_7752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGCCCTGAAGG	NA	False	NA	NA	False	NA	NA	NA	114365676	114365491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_114365500_114365700
Isoform_136024_86	chrX	+	174	1	Intergenic	novelGene_11999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70578648	70578822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_70578600_70578800
Isoform_136025_3	chr4	-	2864	1	Antisense	novelGene_ENSMUSG00000028718.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114864807	114861943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_114861900_114864800
Isoform_136027_101	chr4	-	242	1	Intergenic	novelGene_7753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGAAGCAGAGGTAG	7759	False	NA	NA	False	AAAAAG	-40	NA	114962755	114962513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_114962500_114962800
Isoform_136029_8	chr4	-	169	1	Intergenic	novelGene_7754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGATGAGATTC	NA	False	NA	NA	False	NA	NA	NA	115219484	115219315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_115219300_115219500
Isoform_136034_24	chr4	+	178	1	Intergenic	novelGene_7755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	115649677	115649855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_115649700_115649900
Isoform_136036_16	chr4	+	199	1	Intergenic	novelGene_7756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTGCTCTCAAGGGG	4440	False	NA	NA	False	NA	NA	NA	115804682	115804881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_115804700_115804900
Isoform_136037_3	chr4	+	383	1	Intergenic	novelGene_7757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACTGCGAGAAGGT	4440	False	NA	NA	False	NA	NA	NA	115804682	115805065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_115804700_115805100
Isoform_136051_25	chr4	+	187	1	Intergenic	novelGene_7758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCAGC	NA	False	NA	NA	False	NA	NA	NA	115899067	115899254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_115899100_115899300
Isoform_136056_75	chr9	+	177	1	Intergenic	novelGene_11220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	6725	False	NA	NA	False	NA	NA	NA	44343019	44343196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_44343000_44343200
Isoform_136057_9	chr4	+	175	1	Intergenic	novelGene_7759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGATGACC	NA	False	NA	NA	False	NA	NA	NA	115983411	115983586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_115983400_115983600
Isoform_136058_13	chr4	-	179	1	Intergenic	novelGene_7760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAAAGGCCGG	5537	False	NA	NA	False	NA	NA	NA	116050805	116050626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116050600_116050800
Isoform_136059_16	chr4	+	176	1	Intergenic	novelGene_7761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	116053027	116053203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116053000_116053200
Isoform_13606_299	chr11	-	2034	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	-51	1	-51	-1	multi-exon	FALSE	canonical	3	119	junction_3	14.7044966667419	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGGACTGTGCTTTATTA	5419	False	NA	-3	True	AATACA	-16	NA	62539400	62495710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
Isoform_136060_116	chr6	+	176	1	Intergenic	novelGene_9733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	148849657	148849833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_148849700_148849800
Isoform_136061_9	chr4	-	164	1	Intergenic	novelGene_7762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116094909	116094745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116094700_116094900
Isoform_136062_47	chr4	+	175	1	Intergenic	novelGene_7763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	8287	False	NA	NA	False	NA	NA	NA	116132118	116132293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116132100_116132300
Isoform_136065_157	chr4	-	181	1	Intergenic	novelGene_7764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	116265695	116265514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116265500_116265700
Isoform_136066_11	chr4	+	159	1	Intergenic	novelGene_7765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	116266511	116266670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116266500_116266700
Isoform_136067_3	chr4	+	182	1	Intergenic	novelGene_7766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGAATGGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	116323642	116323824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116323600_116323800
Isoform_136068_3	chr4	-	179	2	Antisense	novelGene_ENSMUSG00000028696.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATGATAAGACAAAGC	NA	False	NA	NA	False	NA	NA	NA	116376620	116376417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_116376426_116376449
Isoform_13607_49	chr11	-	2075	5	NNC	ENSMUSG00000046417.15	novel	1984	4	NA	NA	-116	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	60.5330488245884	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGGACTGTGCTTTATT	5354	False	NA	-4	True	AATACA	-15	NA	62539465	62495711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970_62539400_62539422
Isoform_136070_4	chr4	+	178	1	Antisense	novelGene_ENSMUSG00000055900.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116409949	116410127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_116409900_116410100
Isoform_136073_3	chr4	-	2305	1	NIC	ENSMUSG00000085408.2	novel	2436	3	NA	NA	15	-5578	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGCCTTTTTTCTTTT	9400	False	NA	NA	False	NA	NA	NA	116454812	116452507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_116452500_116454800
Isoform_136077_39	chr4	-	577	1	NIC	ENSMUSG00000028693.16	novel	2118	14	NA	NA	0	-8331	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116484690	116484113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_116484100_116484700
Isoform_136079_282	chr4	+	245	1	Intergenic	novelGene_7767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116487097	116487342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116487100_116487300
Isoform_136081_4	chr4	+	172	1	Intergenic	novelGene_7768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTTTTAAAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	116491362	116491534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116491400_116491500
Isoform_136085_28	chr4	+	154	1	Intergenic	novelGene_7769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116497366	116497520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116497400_116497500
Isoform_136087_44	chr4	-	171	1	Intergenic	novelGene_7770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACATTTATTTAG	NA	False	NA	NA	False	NA	NA	NA	116529028	116528857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116528900_116529000
Isoform_136089_26	chr4	-	192	1	Intergenic	novelGene_7771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAGGCAAC	NA	False	NA	NA	False	NA	NA	NA	116532835	116532643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116532600_116532800
Isoform_13609_4	chr11	-	4468	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	-60	-2424	-60	2424	multi-exon	FALSE	canonical	3	119	junction_3	14.7044966667419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	5410	False	NA	NA	False	TTTAAA	-3	NA	62539409	62493285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
Isoform_136095_11	chr4	+	177	1	Intergenic	novelGene_7772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTAGCCGGGC	1235	False	NA	NA	False	NA	NA	NA	116561384	116561561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116561400_116561600
Isoform_136097_5	chr4	+	175	1	Intergenic	novelGene_7434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAATAAATAAATT	1923	False	NA	NA	False	NA	NA	NA	15960506	15960681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_15960500_15960700
Isoform_136099_37	chr4	-	196	1	Intergenic	novelGene_7773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCACTTCCCTAGTGG	NA	False	NA	NA	False	NA	NA	NA	116574456	116574260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116574300_116574500
Isoform_136100_5	chr4	-	198	1	Intergenic	novelGene_7774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAACCCTTAGCTACACT	2312	False	NA	NA	False	NA	NA	NA	116595312	116595114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116595100_116595300
Isoform_136101_17	chr4	+	176	1	Intergenic	novelGene_7775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAGAAA	5466	False	NA	NA	False	NA	NA	NA	116602246	116602422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116602200_116602400
Isoform_136102_24	chr4	+	175	1	Intergenic	novelGene_7776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGTAGAAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	116610229	116610404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116610200_116610400
Isoform_136103_3	chr4	+	172	1	Intergenic	novelGene_7777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACGACT	NA	False	NA	NA	False	NA	NA	NA	116632421	116632593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116632400_116632600
Isoform_136104_6	chr4	-	213	1	Intergenic	novelGene_7778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCACAGTAAGATTTGC	9987	False	NA	NA	False	NA	NA	NA	116641629	116641416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116641400_116641600
Isoform_136105_5	chr4	+	205	1	Intergenic	novelGene_7779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAGAAAAAA	1337	False	NA	NA	False	NA	NA	NA	116652858	116653063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116652900_116653100
Isoform_136106_13	chr4	+	176	1	Intergenic	novelGene_7780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	5049	False	NA	NA	False	NA	NA	NA	116656570	116656746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116656600_116656700
Isoform_136107_41	chr4	-	1623	1	FSM	ENSMUSG00000043155.5	ENSMUST00000055436.5	1804	1	181	0	181	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCCTCTGTGTCTT	7269	False	NA	-6	True	AATAAA	-26	NA	116678723	116677100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116677100_116678700
Isoform_136108_88	chr4	-	1590	1	FSM	ENSMUSG00000043155.5	ENSMUST00000055436.5	1804	1	214	0	214	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCCTCTGTGTCTT	7302	False	NA	-6	True	AATAAA	-26	NA	116678690	116677100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_116677100_116678700
Isoform_136110_5	chr4	-	185	1	Intergenic	novelGene_7781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATGGGATGAGACATCT	NA	False	NA	NA	False	NA	NA	NA	116708603	116708418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116708400_116708600
Isoform_136111_13	chr4	+	175	1	Intergenic	novelGene_7782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAATATAACATG	3601	False	NA	NA	False	NA	NA	NA	116715504	116715679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116715500_116715700
Isoform_136113_11	chr4	+	181	1	Intergenic	novelGene_7783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	1601	False	NA	NA	False	NA	NA	NA	116722673	116722854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116722700_116722900
Isoform_136116_6	chr4	+	220	1	Intergenic	novelGene_7784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGACGTCTTTCACTT	NA	False	NA	NA	False	NA	NA	NA	116818513	116818733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116818500_116818700
Isoform_136121_3	chr4	-	209	1	Intergenic	novelGene_7785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTTATTACCCTTCC	NA	False	NA	NA	False	TTTAAA	-11	NA	116912076	116911867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116911900_116912100
Isoform_136122_40	chr4	+	180	1	Intergenic	novelGene_7786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAATATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116916757	116916937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116916800_116916900
Isoform_136123_33	chr4	+	210	1	Intergenic	novelGene_7787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGGCGTTATAATGCCG	NA	False	NA	NA	False	AAAAAG	-14	NA	116951075	116951285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_116951100_116951300
Isoform_136124_9	chr4	-	2695	1	NIC	ENSMUSG00000073771.12	novel	597	5	NA	NA	-31	982	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGGAAAAAAAAAAAA	9676	False	NA	NA	False	NA	NA	NA	116982886	116980191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_116980200_116982900
Isoform_136125_15	chr4	-	199	1	Intergenic	novelGene_7788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAACTGGAGAGATGGCT	8288	False	NA	NA	False	NA	NA	NA	116994732	116994533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_116994500_116994700
Isoform_13613_6	chr11	-	5007	6	NIC	ENSMUSG00000005267.14	novel	1605	8	NA	NA	-4	-250	intron_retention	FALSE	canonical	0	0	junction_5	1.16619037896906	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAGAATAAC	NA	False	NA	NA	False	TATAAA	-41	NA	62622715	62602340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62606203_62615622_62615710_62616073_62616201_62618375_62618480_62619107_62619712_62622492
Isoform_136130_11	chr4	-	176	1	Intergenic	novelGene_7789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCGGATAC	NA	False	NA	NA	False	NA	NA	NA	117014536	117014360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_117014400_117014500
Isoform_136131_16	chr4	+	177	1	Intergenic	novelGene_7790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATGAAGCACATAAA	NA	False	NA	NA	False	NA	NA	NA	117018074	117018251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_117018100_117018300
Isoform_136132_7	chr4	+	192	1	Intergenic	novelGene_7791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAACAAATTTTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	117036232	117036424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_117036200_117036400
Isoform_136134_5	chr4	-	150	1	Intergenic	novelGene_7792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAATAAATAAGGGC	NA	False	NA	NA	False	NA	NA	NA	117058153	117058003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_117058000_117058200
Isoform_136135_98	chr4	-	155	1	Intergenic	novelGene_7793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTTTTTTAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	117098688	117098533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_117098500_117098700
Isoform_136136_4	chr4	-	245	1	Intergenic	novelGene_7794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	117106462	117106217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_117106200_117106500
Isoform_136139_3	chr4	-	160	1	Intergenic	novelGene_7795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAATAAA	5946	False	NA	NA	False	NA	NA	NA	117150267	117150107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_117150100_117150300
Isoform_13614_15	chr11	-	2998	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	45	8	0	-8	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAATCGCAGGTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	62680243	62669220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
Isoform_136140_34	chr4	+	177	1	Intergenic	novelGene_7796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTATCAATTAGT	NA	False	NA	NA	False	NA	NA	NA	117245442	117245619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_117245400_117245600
Isoform_136141_9	chr4	+	2411	1	Intergenic	novelGene_7797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117291218	117293629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_117291200_117293600
Isoform_136142_8	chr4	-	182	1	Intergenic	novelGene_7798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	117326248	117326066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_117326100_117326200
Isoform_136148_8	chr4	-	172	1	Intergenic	novelGene_7799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATCTGATCCTG	NA	False	NA	NA	False	NA	NA	NA	117625725	117625553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_117625600_117625700
Isoform_136149_26	chr4	+	155	1	Intergenic	novelGene_7800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAAAATTTAGCAC	NA	False	NA	NA	False	NA	NA	NA	117631118	117631273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_117631100_117631300
Isoform_136150_7	chr4	-	158	1	Intergenic	novelGene_7801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATC	NA	False	NA	NA	False	NA	NA	NA	117668777	117668619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_117668600_117668800
Isoform_136153_30	chr4	-	2986	1	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	5	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGAGGCTTCTGTTGG	NA	False	NA	-5	True	AATAAA	-17	NA	117744512	117741526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_117741500_117744500
Isoform_136157_3	chr4	+	173	1	Intergenic	novelGene_7802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	117815944	117816117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_117815900_117816100
Isoform_136158_10	chr4	+	4151	2	Antisense	novelGene_ENSMUSG00000028538.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAAAAACATGATTTCC	4559	False	NA	NA	False	NA	NA	NA	117853927	117858118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_117856468_117856507
Isoform_13616_16	chr11	-	1788	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	45	1218	0	0	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGGTGTGTCTGTGTG	NA	False	NA	-5	True	AATAGA	-16	NA	62680243	62670430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
Isoform_136160_14	chr4	+	176	1	Intergenic	novelGene_7803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGAGAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	117899198	117899374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_117899200_117899400
Isoform_136161_6	chr4	-	168	1	Intergenic	novelGene_7804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTCTCTTTCTTTCTTC	8486	False	NA	NA	False	NA	NA	NA	117918279	117918111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_117918100_117918300
Isoform_136163_13	chr4	+	181	1	Intergenic	novelGene_7435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATGCATGGTATT	NA	False	NA	NA	False	NA	NA	NA	16953675	16953856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_16953700_16953900
Isoform_136164_28	chr4	+	180	1	Intergenic	novelGene_7805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118025321	118025501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_118025300_118025500
Isoform_136165_27	chr2	-	177	1	Intergenic	novelGene_6309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	71231080	71230903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_71230900_71231100
Isoform_136166_5	chr4	-	174	1	Intergenic	novelGene_7806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATGTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118054870	118054696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_118054700_118054900
Isoform_136167_19	chr4	+	176	1	Intergenic	novelGene_7807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATCATGACCC	NA	False	NA	NA	False	NA	NA	NA	118057568	118057744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_118057600_118057700
Isoform_13617_12	chr11	-	3040	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	4	7	4	-7	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATCGCAGGTTTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	62680284	62669219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
Isoform_136177_16	chr4	-	176	1	Intergenic	novelGene_7808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTCAAGGTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	118296839	118296663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_118296700_118296800
Isoform_136178_12	chr4	+	174	1	Intergenic	novelGene_7809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGATTTCAAAGT	8876	False	NA	NA	False	NA	NA	NA	118298760	118298934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_118298800_118298900
Isoform_136179_12	chr4	-	179	1	Intergenic	novelGene_7810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	2085	False	NA	NA	False	NA	NA	NA	118407165	118406986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_118407000_118407200
Isoform_136180_5	chr4	-	175	1	Intergenic	novelGene_7811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTATAAAAAGA	8200	False	NA	NA	False	NA	NA	NA	118449312	118449137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_118449100_118449300
Isoform_136184_70	chr4	+	172	1	Intergenic	novelGene_7812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAATTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	118873235	118873407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_118873200_118873400
Isoform_13619_13	chr11	-	2884	5	NIC	ENSMUSG00000047342.18	novel	679	6	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	17.8535710713571	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATCGCAGGTTTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	62680243	62669219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755_62679916_62680201
Isoform_136190_4	chr4	-	644	1	Antisense	novelGene_ENSMUSG00000028645.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATAAAACCTGCT	NA	False	NA	NA	False	GATAAA	-27	NA	118994527	118993883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_118993900_118994500
Isoform_136194_3	chr4	-	261	1	Intergenic	novelGene_7814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAAATAAAATTGTTCT	3905	False	NA	NA	False	TATAAA	-2	NA	119123445	119123184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_119123200_119123400
Isoform_136196_14	chr4	+	174	1	Intergenic	novelGene_7815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAAGAAGT	4170	False	NA	NA	False	NA	NA	NA	119124606	119124780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_119124600_119124800
Isoform_136197_8	chr4	+	221	1	Antisense	novelGene_ENSMUSG00000028639.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATAAAAACCCCATG	1727	False	NA	NA	False	AAAAAG	-16	NA	119135185	119135406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_119135200_119135400
Isoform_136201_4	chr4	+	178	1	Intergenic	novelGene_7436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTCATTG	NA	False	NA	NA	False	NA	NA	NA	18411978	18412156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_18412000_18412200
Isoform_136202_368	chr4	+	185	1	Intergenic	novelGene_7816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	646	False	NA	NA	False	NA	NA	NA	119137709	119137894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_119137700_119137900
Isoform_136203_21	chr4	+	191	1	Intergenic	novelGene_7817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTTTTGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	119155210	119155401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_119155200_119155400
Isoform_136204_33	chr4	-	228	1	Intergenic	novelGene_7818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATCCCTCTCTCCTCA	NA	False	NA	NA	False	NA	NA	NA	119157650	119157422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_119157400_119157600
Isoform_136205_3	chr4	+	1698	1	Antisense	novelGene_ENSMUSG00000060288.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAATCTTTCCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	119164487	119166185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_119164500_119166200
Isoform_136207_141	chr4	+	229	1	Intergenic	novelGene_7819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGACAGCAGCTGACA	NA	False	NA	2	True	NA	NA	NA	119227056	119227285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_119227100_119227300
Isoform_136209_21	chr4	-	181	1	Intergenic	novelGene_7820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAACAATATTGACT	9763	False	NA	NA	False	NA	NA	NA	119247400	119247219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_119247200_119247400
Isoform_13621_3	chr11	-	2979	5	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	-50	-7	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	17.8535710713571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATCGCAGGTTTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	62680338	62669219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755_62679916_62680201
Isoform_136210_61	chr4	+	179	1	Intergenic	novelGene_7437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	18619882	18620061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_18619900_18620100
Isoform_136211_47	chr4	-	212	1	Intergenic	novelGene_7821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCATTGCTAGATCGCA	NA	False	NA	NA	False	AAAACA	-14	NA	119367499	119367287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_119367300_119367500
Isoform_136213_21	chr4	-	176	1	Intergenic	novelGene_7822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTTATTTGCCA	1166	False	NA	NA	False	NA	NA	NA	119382667	119382491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_119382500_119382700
Isoform_136214_1027	chr4	+	176	1	Intergenic	novelGene_7823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1027	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	119390224	119390400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_119390200_119390400
Isoform_136219_60	chr4	+	176	1	Intergenic	novelGene_7438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGTAGAATCC	NA	False	NA	NA	False	NA	NA	NA	19006331	19006507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_19006300_19006500
Isoform_13622_5	chr11	-	2797	4	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.3130005674953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAATCGCAGGTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	62680247	62669220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62671726_62678784_62678871_62679755_62679916_62680201
Isoform_136220_5	chr4	-	3820	1	Intergenic	novelGene_7824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTTTGTTGCGTC	NA	False	NA	NA	False	NA	NA	NA	119787498	119783678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_119783700_119787500
Isoform_136221_3	chr4	+	193	1	Intergenic	novelGene_7825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	119906587	119906780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_119906600_119906800
Isoform_136223_20	chr4	-	176	1	Intergenic	novelGene_7826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAATGCAGTGGAT	NA	False	NA	NA	False	NA	NA	NA	120205193	120205017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_120205000_120205200
Isoform_136224_4	chr4	+	179	1	Intergenic	novelGene_7827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAGATGAAGAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	120273826	120274005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_120273800_120274000
Isoform_136226_5	chr4	+	176	1	Intergenic	novelGene_7828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGACATGAATT	789	False	NA	NA	False	NA	NA	NA	120292137	120292313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_120292100_120292300
Isoform_136227_4	chr9	-	171	2	Antisense	novelGene_ENSMUSG00000103621.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108412283	108402237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_108402279_108412153
Isoform_136229_47	chr4	-	258	1	Intergenic	novelGene_7829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACTCCCAACTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	120368971	120368713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_120368700_120369000
Isoform_13623_3	chr11	-	670	5	FSM	ENSMUSG00000047342.18	ENSMUST00000145474.8	641	5	-29	0	-15	0	multi-exon	FALSE	canonical	3	31	junction_2	12.1243556529821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAACATTTTTTCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	62680264	62674341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
Isoform_136230_4	chr4	+	189	1	Intergenic	novelGene_7830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGAGGCCATAGATTT	NA	False	NA	NA	False	NA	NA	NA	120369178	120369367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_120369200_120369400
Isoform_136232_17	chr4	+	175	1	Intergenic	novelGene_7831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAACAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	120419740	120419915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_120419700_120419900
Isoform_136235_91	chr4	+	1248	1	FSM	ENSMUSG00000070803.7	ENSMUST00000094814.6	1249	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGTTTCCATTTCCT	6119	False	NA	8	True	AATAAA	-17	NA	120523768	120525016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_120523800_120525000
Isoform_136236_4	chr4	-	159	1	Intergenic	novelGene_7832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAAAAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	120534035	120533876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_120533900_120534000
Isoform_136237_10	chr4	-	159	1	Intergenic	novelGene_7833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	120548367	120548208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_120548200_120548400
Isoform_136238_7	chr4	+	176	1	Intergenic	novelGene_7834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTGGGAG	NA	False	NA	NA	False	NA	NA	NA	120660589	120660765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_120660600_120660800
Isoform_136239_5	chr4	-	194	1	Intergenic	novelGene_7439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTACTTATTTATTCAA	NA	False	NA	NA	False	NA	NA	NA	19489047	19488853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_19488900_19489000
Isoform_13624_24	chr11	-	4894	2	FSM	ENSMUSG00000070407.6	ENSMUST00000094103.4	4911	2	17	0	17	0	multi-exon	FALSE	canonical	3	10	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGAGTATGTTCCTATT	NA	False	NA	-2	True	AATAAA	-15	NA	63813099	63776617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_63780572_63812159
Isoform_136240_3	chr4	+	3475	1	Intergenic	novelGene_7835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGTTTGGAATCACAG	NA	False	NA	NA	False	NA	NA	NA	120664163	120667638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_120664200_120667600
Isoform_136241_7	chr4	+	168	1	Intergenic	novelGene_7836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATTGGCATAAA	NA	False	NA	NA	False	NA	NA	NA	120683456	120683624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_120683500_120683600
Isoform_136243_20	chr4	-	199	1	Intergenic	novelGene_7837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTACCCAGCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	120755300	120755101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_120755100_120755300
Isoform_136244_4	chr4	+	168	1	Intergenic	novelGene_7838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTGATGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	120761220	120761388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_120761200_120761400
Isoform_13625_6	chr11	-	4915	2	FSM	ENSMUSG00000070407.6	ENSMUST00000094103.4	4911	2	-6	2	-6	-2	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTGAGTATGTTCCTA	NA	False	NA	-4	True	AATAAA	-13	NA	63813122	63776619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_63780572_63812159
Isoform_136256_110	chr9	-	177	1	Intergenic	novelGene_11646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106855268	106855091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106855100_106855300
Isoform_136257_10	chr4	+	218	1	Intergenic	novelGene_7840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGTTACTAACTTCTT	NA	False	NA	NA	False	NA	NA	NA	120865155	120865373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_120865200_120865400
Isoform_136263_65	chr4	-	212	1	Intergenic	novelGene_7841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	8631	False	NA	NA	False	AAAAAG	-20	NA	120971464	120971252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_120971300_120971500
Isoform_136266_7	chr4	-	2758	1	FSM	ENSMUSG00000049878.14	ENSMUST00000222814.2	2752	1	-7	1	-7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6457	False	NA	NA	False	NA	NA	NA	121072288	121069530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_121069500_121072300
Isoform_13627_301	chr11	-	2913	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-4	6	-2	-6	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACCTGAGCGTGTGTC	5003	False	NA	-10	True	AATAAA	-8	NA	63970296	63853458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
Isoform_136276_77	chr4	+	175	1	Intergenic	novelGene_7842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAGAAGAAGGA	1447	False	NA	NA	False	NA	NA	NA	122887712	122887887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_122887700_122887900
Isoform_13628_12	chr11	-	3234	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-4	-315	-2	315	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCCTCCCTGTCTGGCC	5003	False	NA	NA	False	AATAAA	-19	NA	63970296	63853137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
Isoform_136281_208	chr17	+	178	1	Intergenic	novelGene_4660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	6463283	6463461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_6463300_6463500
Isoform_136282_13	chr4	+	175	1	Intergenic	novelGene_7843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATATTAA	NA	False	NA	NA	False	NA	NA	NA	122952249	122952424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_122952200_122952400
Isoform_136285_4	chr4	+	670	1	Genic_Genomic	ENSMUSG00000028229.12	novel	NA	NA	NA	NA	-80	-22903	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	10	True	NA	NA	False	NA	NA	NA	19575081	19575751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_19575100_19575800
Isoform_136288_9	chr4	+	175	1	Intergenic	novelGene_7844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGGGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	123152127	123152302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_123152100_123152300
Isoform_136290_55	chr4	-	176	1	Intergenic	novelGene_7845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	123162496	123162320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123162300_123162500
Isoform_136297_4	chr4	+	177	1	Intergenic	novelGene_7847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGCGAGCAGGGCCT	NA	False	NA	NA	False	NA	NA	NA	123213134	123213311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_123213100_123213300
Isoform_136298_30	chr4	-	160	1	Intergenic	novelGene_7848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	123225191	123225031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123225000_123225200
Isoform_136300_4	chr4	-	177	1	Intergenic	novelGene_7849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGAAGATGATGATG	NA	False	NA	NA	False	NA	NA	NA	123266572	123266395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123266400_123266600
Isoform_136301_23	chr4	+	2672	1	Antisense	novelGene_ENSMUSG00000028649.22_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	123271092	123273764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_123271100_123273800
Isoform_136302_28	chr4	+	842	1	Intergenic	novelGene_7850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	123272922	123273764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_123272900_123273800
Isoform_136305_10	chr4	-	178	1	Intergenic	novelGene_7851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	8290	False	NA	NA	False	NA	NA	NA	123379066	123378888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123378900_123379100
Isoform_136306_145	chr4	+	180	1	Intergenic	novelGene_7852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123397741	123397921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_123397700_123397900
Isoform_136309_14	chr4	-	174	1	Intergenic	novelGene_7853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAATGATGGCTAAT	7	True	NA	NA	False	NA	NA	NA	123473137	123472963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123473000_123473100
Isoform_136310_56	chr4	-	177	1	Intergenic	novelGene_7854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAAATGAAGG	8961	False	NA	NA	False	NA	NA	NA	123477457	123477280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123477300_123477500
Isoform_136311_29	chr4	-	179	1	Intergenic	novelGene_7855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTAAGACATGGC	NA	False	NA	NA	False	NA	NA	NA	123551187	123551008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123551000_123551200
Isoform_136312_55	chr4	+	164	1	Intergenic	novelGene_7856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	123553457	123553621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_123553500_123553600
Isoform_136313_3	chr4	-	3518	1	Genic_Genomic	ENSMUSG00000028649.22	novel	NA	NA	NA	NA	-2945	-144908	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	123581098	123577580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_123577600_123581100
Isoform_136317_36	chr16	-	171	1	Intergenic	novelGene_4620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTTTTTTAGGG	NA	False	NA	NA	False	NA	NA	NA	92090518	92090347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_92090300_92090500
Isoform_136318_8	chr4	-	176	1	Intergenic	novelGene_7858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTTAAGTTACGC	NA	False	NA	NA	False	NA	NA	NA	123651235	123651059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123651100_123651200
Isoform_136319_3	chr4	+	2271	1	NIC	ENSMUSG00000043333.13	novel	1217	8	NA	NA	-19	667	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAGTAAGAAG	NA	False	NA	NA	False	NA	NA	NA	123703687	123705958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_123703700_123706000
Isoform_136320_71	chr4	-	176	1	Intergenic	novelGene_7859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5786	False	NA	NA	False	NA	NA	NA	123712417	123712241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123712200_123712400
Isoform_136321_45	chr4	-	173	1	Intergenic	novelGene_7440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	19850595	19850422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_19850400_19850600
Isoform_136322_7	chr4	+	2442	1	NIC	ENSMUSG00000028647.14	novel	1685	5	NA	NA	-38	-2279	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123798795	123801237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_123798800_123801200
Isoform_136323_7	chr4	-	2934	1	FSM	ENSMUSG00000085875.4	ENSMUST00000238344.2	2706	1	758	-986	4	986	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	123811058	123808124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_123808100_123811100
Isoform_136324_14	chr4	-	744	1	Intergenic	novelGene_7860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123816041	123815297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123815300_123816000
Isoform_136326_88	chr4	+	176	1	Intergenic	novelGene_7861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGAAATTTGA	4314	False	NA	NA	False	NA	NA	NA	123952295	123952471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_123952300_123952500
Isoform_136327_4	chr4	+	2353	1	Antisense	novelGene_ENSMUSG00000003282.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTCCAAT	NA	False	NA	NA	False	NA	NA	NA	3900976	3903329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_3901000_3903300
Isoform_136333_5	chr4	-	2354	1	Intergenic	novelGene_7863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAGAAAAAAGATTATT	NA	False	NA	NA	False	NA	NA	NA	124252214	124249860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_124249900_124252200
Isoform_136339_42	chr4	-	558	1	Intergenic	novelGene_7864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGAGGAAAATGTCCCA	NA	False	NA	NA	False	NA	NA	NA	124252215	124251657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_124251700_124252200
Isoform_13634_36	chr11	-	4064	21	FSM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	10	0	10	0	multi-exon	FALSE	canonical	3	13	junction_17	3.6779749863206	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCACATGGTCTTGTT	NA	False	NA	0	True	ATTAAA	-20	NA	65053777	64892864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
Isoform_136340_183	chr4	-	497	1	Intergenic	novelGene_7865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGGGTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	124252215	124251718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_124251700_124252200
Isoform_136342_15	chr8	-	429	1	Intergenic	novelGene_11071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGGGTTTAAAGTC	NA	False	NA	NA	False	NA	NA	NA	129480221	129479792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_129479800_129480200
Isoform_136348_13	chr4	+	3049	1	FSM	ENSMUSG00000090125.4	ENSMUST00000053491.9	3849	1	798	2	798	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTCCTGTTCTCTT	NA	False	NA	26	True	AGTAAA	-32	NA	124551397	124554446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124551400_124554400
Isoform_13635_7	chr11	-	2129	16	ISM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	4	19615	4	-19613	5prime_fragment	FALSE	canonical	3	13	junction_12	3.56775684273591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGGGAATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	65053783	64912479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
Isoform_136351_34	chr4	+	2998	1	FSM	ENSMUSG00000090125.4	ENSMUST00000053491.9	3849	1	848	3	848	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTGTGTCCTGTTCTCT	NA	False	NA	25	True	AGTAAA	-31	NA	124551447	124554445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_124551400_124554400
Isoform_136354_20	chr4	+	217	1	Intergenic	novelGene_7866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTTTATGTTTGAAA	NA	False	NA	NA	False	AAAAAG	-23	NA	124563523	124563740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_124563500_124563700
Isoform_136355_75	chr4	-	229	1	ISM	ENSMUSG00000028907.8	ENSMUST00000153088.2	4008	6	11451	3058	11451	-3058	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTTGACAGAGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	124575876	124575647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_124575600_124575900
Isoform_136358_5	chr4	-	178	1	Intergenic	novelGene_7867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAATAACTCTT	NA	False	NA	NA	False	NA	NA	NA	124606085	124605907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_124605900_124606100
Isoform_136359_12	chr4	+	179	1	Intergenic	novelGene_7868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGAATTACAG	NA	False	NA	NA	False	NA	NA	NA	124607865	124608044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_124607900_124608000
Isoform_13636_3	chr11	-	2283	16	ISM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	2	19463	2	-19461	5prime_fragment	FALSE	canonical	3	13	junction_12	3.56775684273591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATACAGGTATTCTAGG	NA	False	NA	NA	False	NA	NA	NA	65053785	64912327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
Isoform_136361_5	chr4	-	260	1	Intergenic	novelGene_7869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTCCTCCATAAGTACT	NA	False	NA	NA	False	NA	NA	NA	124656471	124656211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_124656200_124656500
Isoform_136364_5	chr4	-	2489	1	FSM	ENSMUSG00000078570.11	ENSMUST00000184704.2	1251	1	-850	-388	16	388	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGTAGA	7205	False	NA	NA	False	AAAAAG	-22	NA	124744973	124742484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_124742500_124745000
Isoform_136368_42	chr4	+	204	1	Intergenic	novelGene_7870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAGAAAGT	9608	False	NA	NA	False	NA	NA	NA	124761236	124761440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_124761200_124761400
Isoform_13637_46	chr11	-	3607	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	3	-106	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAATCTGATTTTCT	NA	False	NA	-13	True	AATAAA	-18	NA	65679108	65579174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
Isoform_136370_36	chr4	+	175	1	Intergenic	novelGene_7871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTGTA	NA	False	NA	NA	False	NA	NA	NA	124770442	124770617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_124770400_124770600
Isoform_136372_13	chr4	+	176	1	Intergenic	novelGene_7872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAAGGGGAGGCCAACC	446	False	NA	NA	False	NA	NA	NA	124799301	124799477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_124799300_124799500
Isoform_136377_3	chr4	-	3782	1	Antisense	novelGene_ENSMUSG00000050213.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124966317	124962535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_124962500_124966300
Isoform_136378_3	chr4	-	169	1	Intergenic	novelGene_7873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	124972365	124972196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_124972200_124972400
Isoform_136379_59	chr4	-	175	1	Intergenic	novelGene_7874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAATGAACTT	NA	False	NA	NA	False	NA	NA	NA	124982414	124982239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_124982200_124982400
Isoform_136381_4	chr4	-	164	1	Intergenic	novelGene_7875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGGTTTTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	125031332	125031168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_125031200_125031300
Isoform_136382_15	chr4	-	179	1	Intergenic	novelGene_7876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	125048485	125048306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_125048300_125048500
Isoform_136383_42	chr4	-	191	1	Intergenic	novelGene_7877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGCAGTGCTTGAGC	NA	False	NA	NA	False	NA	NA	NA	125165829	125165638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_125165600_125165800
Isoform_136388_5	chr4	+	186	1	FSM	ENSMUSG00000119232.1	ENSMUST00000239706.1	109	1	91	-168	91	168	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGCAGAAGGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	125398632	125398818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_125398600_125398800
Isoform_136390_4	chr4	+	3526	1	ISM	ENSMUSG00000001985.10	ENSMUST00000030676.8	8973	16	219947	1	219947	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTTCCCAAGGTGTGTT	NA	False	NA	10	True	AATAAA	-17	NA	125604439	125607965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_125604400_125608000
Isoform_136395_3	chr4	-	194	1	Intergenic	novelGene_7878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAACCTTGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	125886086	125885892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_125885900_125886100
Isoform_136401_69	chr4	-	177	1	Intergenic	novelGene_7880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTACG	NA	False	NA	NA	False	NA	NA	NA	125990020	125989843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_125989800_125990000
Isoform_136405_21	chr4	-	192	1	Intergenic	novelGene_7881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATAGGGTAAAGCCCG	5456	False	NA	NA	False	NA	NA	NA	126052966	126052774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_126052800_126053000
Isoform_13641_31	chr11	-	3715	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-12	-25	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGGAGAGTTATCTCC	NA	False	NA	-26	True	ATTAAA	-17	NA	65679135	65579093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
Isoform_136413_26	chr4	+	175	1	Intergenic	novelGene_7441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	21693915	21694090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_21693900_21694100
Isoform_136417_80	chr4	+	175	1	Intergenic	novelGene_7442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATGTAAATG	NA	False	NA	NA	False	NA	NA	NA	21722323	21722498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_21722300_21722500
Isoform_136418_6	chrX	-	157	1	Intergenic	novelGene_11908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	35860321	35860164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_35860200_35860300
Isoform_136419_3	chr4	+	181	1	Intergenic	novelGene_7882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTTTTTAAAAAGGT	6272	False	NA	NA	False	NA	NA	NA	126280293	126280474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126280300_126280500
Isoform_136420_48	chr4	-	177	1	Intergenic	novelGene_7443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21725181	21725004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_21725000_21725200
Isoform_136421_9	chr4	+	185	1	Intergenic	novelGene_7883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	126306986	126307171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126307000_126307200
Isoform_13643_8	chr11	-	3768	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-66	-26	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACAGGAGAGTTATCTC	NA	False	NA	-27	True	ATTAAA	-16	NA	65679189	65579094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
Isoform_136431_25	chr4	-	3655	1	ISM	ENSMUSG00000041530.18	ENSMUST00000239428.2	7065	19	29752	3	4692	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCAGTCTGTTTTTTT	6152	False	NA	-23	True	TATAAA	-23	NA	126332462	126328807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_126328800_126332500
Isoform_136439_55	chr4	-	174	1	Intergenic	novelGene_7884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	126339557	126339383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_126339400_126339600
Isoform_136443_51	chr4	+	176	1	Intergenic	novelGene_7885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATATTTATATAAATAA	NA	False	NA	NA	False	NA	NA	NA	126440757	126440933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126440800_126440900
Isoform_136444_10	chr4	+	471	1	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-17	-2838	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126450770	126451241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_126450800_126451200
Isoform_136445_46	chr4	-	181	1	Intergenic	novelGene_7886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	126498882	126498701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_126498700_126498900
Isoform_136446_9	chr4	+	1267	1	NIC	ENSMUSG00000028252.21	novel	3484	13	NA	NA	-5	-3569	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	-12	True	NA	NA	False	NA	NA	NA	21727747	21729014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_21727700_21729000
Isoform_136447_27	chr5	-	171	1	Intergenic	novelGene_9174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGTAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	150638540	150638369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_150638400_150638500
Isoform_136448_3	chr12	+	172	1	Intergenic	novelGene_2676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTTTAAAAAAAAAAAAAAA	7438	False	NA	NA	False	NA	NA	NA	80700118	80700290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_80700100_80700300
Isoform_136449_5	chr4	+	184	1	Intergenic	novelGene_7887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	126534836	126535020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126534800_126535000
Isoform_13645_208	chr11	-	3585	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	1	109	1	-109	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCTTGTAATCTGATTT	NA	False	NA	-16	True	AATAAA	-15	NA	65679122	65579177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
Isoform_136450_27	chr4	+	209	1	Intergenic	novelGene_7888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1141	False	NA	NA	False	NA	NA	NA	126567183	126567392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126567200_126567400
Isoform_136455_5	chr4	-	168	1	Intergenic	novelGene_7889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	126690132	126689964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_126690000_126690100
Isoform_136456_5	chr4	+	213	1	Intergenic	novelGene_7890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGGGGGTTTTGAGAC	NA	False	NA	NA	False	NA	NA	NA	126725254	126725467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126725300_126725500
Isoform_136457_101	chr4	-	175	1	Intergenic	novelGene_7444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAGTAACAA	NA	False	NA	NA	False	NA	NA	NA	21753263	21753088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_21753100_21753300
Isoform_136459_25	chr7	-	192	1	Intergenic	novelGene_10079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGCTGGTGAGATAGC	NA	False	NA	NA	False	NA	NA	NA	49211619	49211427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_49211400_49211600
Isoform_136460_19	chr4	-	171	1	Intergenic	novelGene_7891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCTTAAAAAAAAAGACTAG	NA	False	NA	NA	False	NA	NA	NA	126807379	126807208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_126807200_126807400
Isoform_136461_4	chr4	+	176	1	Intergenic	novelGene_7892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGT	4186	False	NA	NA	False	NA	NA	NA	126812772	126812948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126812800_126812900
Isoform_136462_52	chr4	+	152	1	Intergenic	novelGene_7445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5040	False	NA	NA	False	NA	NA	NA	21754745	21754897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_21754700_21754900
Isoform_136463_5	chr4	+	1613	1	Antisense	novelGene_ENSMUSG00000042446.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGTTATTCTCCATGG	NA	False	NA	NA	False	ATTAAA	-21	NA	126861561	126863174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_126861600_126863200
Isoform_136464_11	chr4	-	196	1	Intergenic	novelGene_7893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTTTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	126869136	126868940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_126868900_126869100
Isoform_136468_18	chr4	+	176	1	Intergenic	novelGene_7895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAATAAATACA	NA	False	NA	NA	False	NA	NA	NA	126882851	126883027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126882900_126883000
Isoform_136469_9	chr4	+	177	1	Intergenic	novelGene_7896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	126912754	126912931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126912800_126912900
Isoform_13647_125	chr11	-	3669	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	1	25	1	-25	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGGAGAGTTATCTCC	NA	False	NA	-26	True	ATTAAA	-17	NA	65679122	65579093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
Isoform_136486_3	chr4	+	3437	2	Antisense	novelGene_ENSMUSG00000043872.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAAAGGTGTTAAGACC	NA	False	NA	NA	False	NA	NA	NA	126946085	126949567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_126949141_126949185
Isoform_136488_17	chr4	+	168	1	Intergenic	novelGene_7897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTTAGCCATTCT	NA	False	NA	NA	False	NA	NA	NA	126959863	126960031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126959900_126960000
Isoform_136489_236	chr4	-	176	1	Intergenic	novelGene_7898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	126970724	126970548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_126970500_126970700
Isoform_136490_26	chr4	+	174	1	Intergenic	novelGene_7899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	126983769	126983943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126983800_126983900
Isoform_136492_591	chr10	-	177	1	Intergenic	novelGene_872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	591	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59830077	59829900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_59829900_59830100
Isoform_136493_6	chr4	+	281	1	Intergenic	novelGene_7446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	21764243	21764524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_21764200_21764500
Isoform_136496_22	chr4	+	3601	1	NIC	ENSMUSG00000070737.11	novel	1762	3	NA	NA	-2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019836	127023437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_127019800_127023400
Isoform_136498_73	chr6	-	176	1	Intergenic	novelGene_9360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	49265230	49265054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_49265100_49265200
Isoform_13651_17	chr11	-	3424	10	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-12	-108	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	72.4284235863924	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGTAATCTGATTTT	NA	False	NA	-15	True	AATAAA	-16	NA	65679135	65579176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65678961
Isoform_136518_157	chr4	+	195	1	Intergenic	novelGene_7902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGACTGACTAA	NA	False	NA	NA	False	NA	NA	NA	127343301	127343496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_127343300_127343500
Isoform_136519_9	chr4	-	172	1	Intergenic	novelGene_7903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTTTTTAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	127394590	127394418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_127394400_127394600
Isoform_136521_469	chr4	+	177	1	Intergenic	novelGene_7904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAATTCTCA	NA	False	NA	NA	False	NA	NA	NA	128505768	128505945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_128505800_128505900
Isoform_136522_6	chr4	+	1706	1	NIC	ENSMUSG00000028796.18	novel	3949	15	NA	NA	53	-49167	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAATCAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	128548583	128550289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_128548600_128550300
Isoform_136524_106	chr4	-	177	1	Intergenic	novelGene_7905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3474	False	NA	NA	False	NA	NA	NA	128741632	128741455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_128741500_128741600
Isoform_136534_3	chr4	+	183	1	Intergenic	novelGene_7906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAAGTATTTG	NA	False	NA	NA	False	NA	NA	NA	128912235	128912418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_128912200_128912400
Isoform_136536_13	chr4	-	156	1	Intergenic	novelGene_7907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATAGAT	4208	False	NA	NA	False	NA	NA	NA	128931701	128931545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_128931500_128931700
Isoform_136537_3	chr4	-	5349	2	Genic_Genomic	ENSMUSG00000085085.3	novel	1009	2	NA	NA	17	-2471	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	128951759	128946360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_128946376_128946425
Isoform_136538_63	chr4	-	217	1	Intergenic	novelGene_7908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCAACACAGCAAAGCCAT	NA	False	NA	NA	False	AATAAA	-24	NA	128964217	128964000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_128964000_128964200
Isoform_136540_8	chr4	-	2553	1	Antisense	novelGene_ENSMUSG00000028793.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128968508	128965955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_128966000_128968500
Isoform_136541_40	chr4	-	176	1	Intergenic	novelGene_7909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128995770	128995594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_128995600_128995800
Isoform_136542_23	chr4	+	176	1	Intergenic	novelGene_7910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3371	False	NA	NA	False	NA	NA	NA	128996684	128996860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_128996700_128996900
Isoform_136543_34	chr11	-	179	1	Intergenic	novelGene_2037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTATTAAT	NA	False	NA	NA	False	NA	NA	NA	95945034	95944855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95944900_95945000
Isoform_136547_14	chr4	+	173	1	Intergenic	novelGene_7912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAACAAAAACAAAA	3024	False	NA	NA	False	NA	NA	NA	129061354	129061527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129061400_129061500
Isoform_136548_6	chr4	-	155	1	Intergenic	novelGene_7913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTTAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	129065785	129065630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129065600_129065800
Isoform_13656_85	chr11	-	1290	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	-20	13	1	-13	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	-11	True	CATAAA	-15	NA	66943416	66928879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
Isoform_136569_28	chr4	-	179	1	Intergenic	novelGene_7914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129149790	129149611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129149600_129149800
Isoform_136570_7	chr4	+	179	1	Intergenic	novelGene_7915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCAATACT	NA	False	NA	NA	False	NA	NA	NA	129156425	129156604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129156400_129156600
Isoform_136571_4	chr4	+	227	1	Intergenic	novelGene_7916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129172917	129173144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129172900_129173100
Isoform_136572_36	chr4	-	176	1	Intergenic	novelGene_7917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAGCAGCACAGA	NA	False	NA	NA	False	NA	NA	NA	129194190	129194014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129194000_129194200
Isoform_136574_117	chr4	+	176	1	Intergenic	novelGene_7918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	618	False	NA	NA	False	NA	NA	NA	129213358	129213534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129213400_129213500
Isoform_136575_27	chr4	+	214	1	Intergenic	novelGene_7919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGAGCTCACCAATT	NA	False	NA	NA	False	AAAAAG	-18	NA	129222771	129222985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129222800_129223000
Isoform_136578_4	chr4	-	786	1	Intergenic	novelGene_7920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8037	False	NA	NA	False	NA	NA	NA	129240427	129239641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129239600_129240400
Isoform_13658_11	chr11	-	1211	4	NIC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	-15	-13	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	43.2229362980145	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	-11	True	CATAAA	-15	NA	66943435	66928879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_66929272_66931044_66931162_66932306_66932934_66943360
Isoform_136581_3	chr4	+	485	1	Intergenic	novelGene_7921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACATATATATATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	129269133	129269618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129269100_129269600
Isoform_136582_19	chr4	+	172	1	Intergenic	novelGene_7922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	129273136	129273308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129273100_129273300
Isoform_136583_63	chrX	+	177	1	Intergenic	novelGene_12088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100176777	100176954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100176800_100177000
Isoform_136584_122	chr4	+	181	1	Intergenic	novelGene_7658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	86721727	86721908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_86721700_86721900
Isoform_136585_16	chr4	+	204	1	Intergenic	novelGene_7923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTGTTTAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	129281442	129281646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129281400_129281600
Isoform_136587_14	chr4	+	173	1	Intergenic	novelGene_7924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1721	False	NA	NA	False	NA	NA	NA	129314297	129314470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129314300_129314500
Isoform_136588_8	chr4	-	176	1	Intergenic	novelGene_7925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	129344521	129344345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129344300_129344500
Isoform_13659_3	chr11	-	1376	4	NIC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	-17	14	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	43.2229362980145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTCCTGAGAAGGGGC	NA	False	NA	NA	False	AATAAA	-24	NA	66943437	66928716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_66929272_66931044_66931162_66932306_66932934_66943360
Isoform_136590_77	chr4	+	173	1	Intergenic	novelGene_7926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCTTATTTTATTTT	9739	False	NA	6	True	NA	NA	NA	129345767	129345940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129345800_129345900
Isoform_136591_8	chr4	-	171	1	Intergenic	novelGene_7927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACAAAACAAGGCC	NA	False	NA	NA	False	NA	NA	NA	129352717	129352546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129352500_129352700
Isoform_13660_36	chr11	-	2456	4	NIC	ENSMUSG00000020910.17	novel	1531	5	NA	NA	-17	-13	intron_retention	FALSE	canonical	3	79	junction_3	12.2474487139159	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	-11	True	CATAAA	-15	NA	66943437	66928879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_66929272_66931044_66932934_66942506_66942605_66943360
Isoform_13661_3	chr11	-	2340	3	NIC	ENSMUSG00000020910.17	novel	1531	5	NA	NA	1	-13	intron_retention	FALSE	canonical	2	8	junction_2	50.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	-11	True	CATAAA	-15	NA	66943419	66928879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_66929272_66931044_66932934_66943360
Isoform_136610_101	chr4	+	181	1	Intergenic	novelGene_7928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCCCATCTTG	436	False	NA	NA	False	NA	NA	NA	129474512	129474693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129474500_129474700
Isoform_136611_8	chr4	+	173	1	Intergenic	novelGene_7929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTTTTTTTTTCCGAG	3401	False	NA	NA	False	NA	NA	NA	129477477	129477650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129477500_129477600
Isoform_136615_50	chr4	+	169	1	Intergenic	novelGene_7930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8226	False	NA	NA	False	NA	NA	NA	129499522	129499691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129499500_129499700
Isoform_13662_8	chr11	-	4215	3	NIC	ENSMUSG00000020910.17	novel	1531	5	NA	NA	0	-7	intron_retention	FALSE	canonical	3	79	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAAGTATTCTGTTTGT	NA	False	NA	-5	True	CATAAA	-21	NA	66943417	66928873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_66932934_66942506_66942605_66943360
Isoform_136627_34	chr2	+	183	1	Intergenic	novelGene_6859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	176554992	176555175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_176555000_176555200
Isoform_13664_26	chr11	-	4002	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-13	473	-13	361	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTTTCCTTTTCATG	NA	False	NA	NA	False	AATAAA	-13	NA	67812992	67745821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_136640_4	chr4	+	374	1	Intergenic	novelGene_7931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAACAACAAAAAGAA	NA	False	NA	NA	False	AAAACA	-26	NA	129567831	129568205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129567800_129568200
Isoform_136641_6	chr4	+	188	1	Intergenic	novelGene_7932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGGGCTAGAGATGTG	3160	False	NA	NA	False	NA	NA	NA	129578803	129578991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129578800_129579000
Isoform_136642_18	chr4	+	3693	1	Antisense	novelGene_ENSMUSG00000028790.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGGAAAAGAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-13	NA	129597298	129600991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_129597300_129601000
Isoform_13665_20	chr11	-	4307	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-13	168	-13	-168	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCGGACTGAATTACTG	NA	False	NA	NA	False	AATAAA	-23	NA	67812992	67745516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_136650_13	chr4	+	833	1	NIC	ENSMUSG00000028247.3	novel	2651	7	NA	NA	9	-19931	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAACAAAAACAAAAACA	-1	True	NA	NA	False	NA	NA	NA	21879681	21880514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_21879700_21880500
Isoform_136651_8	chr4	+	192	1	Intergenic	novelGene_7933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTCTG	NA	False	NA	NA	False	NA	NA	NA	129638013	129638205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129638000_129638200
Isoform_136652_9	chr4	-	155	1	Intergenic	novelGene_7934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	5693	False	NA	NA	False	NA	NA	NA	129656770	129656615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129656600_129656800
Isoform_136653_3	chr4	-	204	1	Intergenic	novelGene_7935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGTTTTAAAGTCC	4851	False	NA	NA	False	NA	NA	NA	129667936	129667732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129667700_129667900
Isoform_136654_15	chr4	+	199	1	Intergenic	novelGene_7936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATGTGAGTACACG	NA	False	NA	NA	False	NA	NA	NA	129674908	129675107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129674900_129675100
Isoform_136655_52	chr4	-	175	1	Intergenic	novelGene_7937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAACAAAAAACAAA	4582	False	NA	NA	False	NA	NA	NA	129680158	129679983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129680000_129680200
Isoform_136656_5	chr4	-	171	1	Intergenic	novelGene_7938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	613	False	NA	NA	False	NA	NA	NA	129696241	129696070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129696100_129696200
Isoform_136658_36	chr4	-	180	1	Intergenic	novelGene_7940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129704532	129704352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129704400_129704500
Isoform_136659_19	chr4	+	1861	1	Genic_Genomic	ENSMUSG00000028788.15	novel	NA	NA	NA	NA	-11	9549	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGGGGGTGTTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	129714002	129715863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_129714000_129715900
Isoform_13666_7	chr11	-	4444	16	NNC	ENSMUSG00000020905.12	novel	4462	15	NA	NA	-14	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.76724135490641	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATCCTTTCCTTTCCT	NA	False	NA	NA	False	ATTAAA	-15	NA	67812993	67745352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_67745709_67745736_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_136660_9	chr4	-	3718	2	Antisense	novelGene_ENSMUSG00000028788.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTTACGCT	NA	False	NA	NA	False	ATTAAA	-32	NA	129718774	129715031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_129718266_129718290
Isoform_136662_32	chr4	-	364	1	Antisense	novelGene_ENSMUSG00000028788.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCCTAC	8972	False	NA	NA	False	ATTAAA	-18	NA	129733321	129732957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_129733000_129733300
Isoform_136663_4	chr4	-	480	1	Antisense	novelGene_ENSMUSG00000028788.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCCTAC	8856	False	NA	NA	False	ATTAAA	-18	NA	129733437	129732957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_129733000_129733400
Isoform_13667_4	chr11	-	4114	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-125	473	-125	361	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTTTCCTTTTCATG	NA	False	NA	NA	False	AATAAA	-13	NA	67813104	67745821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_136676_6	chr4	+	296	1	Intergenic	novelGene_7941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTTGTATGACTT	6450	False	NA	NA	False	NA	NA	NA	129779005	129779301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129779000_129779300
Isoform_136677_21	chr4	-	176	1	Intergenic	novelGene_7942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAAAAGGAGGAGG	6335	False	NA	0	True	NA	NA	NA	129817002	129816826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129816800_129817000
Isoform_136678_3	chr4	-	2667	1	Antisense	novelGene_ENSMUSG00000028782.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	129899598	129896931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_129896900_129899600
Isoform_136679_34	chr4	+	175	1	Intergenic	novelGene_7447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGCAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21954804	21954979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_21954800_21955000
Isoform_13668_5	chr11	-	4269	16	NNC	ENSMUSG00000020905.12	novel	4447	15	NA	NA	-18	-168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.09663853432741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCGGACTGAATTACTG	NA	False	NA	NA	False	AATAAA	-23	NA	67812997	67745516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_67745709_67745736_67747371_67766088_67766254_67767198_67767358_67770636_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_136680_3	chr4	-	178	1	Intergenic	novelGene_7943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACCAACAAC	6754	False	NA	NA	False	NA	NA	NA	130132401	130132223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_130132200_130132400
Isoform_136688_4	chr4	-	213	1	Intergenic	novelGene_7944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAGCCCCCAAAGCAAA	1546	False	NA	NA	False	NA	NA	NA	130293888	130293675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_130293700_130293900
Isoform_136689_109	chr4	-	176	1	Intergenic	novelGene_7945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130312682	130312506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_130312500_130312700
Isoform_13669_5	chr11	-	4011	15	FSM	ENSMUSG00000020905.12	ENSMUST00000108677.2	4447	15	-31	467	-31	367	multi-exon	FALSE	canonical	1	2	junction_3	6.60086574408453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTCATGCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	67813010	67745815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770636_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_136690_23	chr4	-	174	1	Intergenic	novelGene_7946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGGGCAAA	NA	False	NA	NA	False	NA	NA	NA	130317833	130317659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_130317700_130317800
Isoform_136693_8	chr4	-	170	1	Intergenic	novelGene_7947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTTATTTAAA	4936	False	NA	NA	False	NA	NA	NA	130355004	130354834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_130354800_130355000
Isoform_136695_266	chr4	-	218	2	Intergenic	novelGene_7949	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTATAGTTGGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	130364764	130364522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_130364533_130364556
Isoform_136696_82	chrX	-	182	1	Intergenic	novelGene_12152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7623	False	NA	NA	False	NA	NA	NA	105062490	105062308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_105062300_105062500
Isoform_136697_247	chr4	-	320	1	Intergenic	novelGene_7950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130369676	130369356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_130369400_130369700
Isoform_13670_7	chr11	-	3200	5	ISM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-13	40585	-13	2131	5prime_fragment	FALSE	canonical	3	16	junction_4	2.69258240356725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-33	NA	67812992	67785933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_136701_246	chr4	-	197	1	Intergenic	novelGene_7951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGTAACGTGAAGTAAAT	NA	False	NA	NA	False	NA	NA	NA	130410800	130410603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_130410600_130410800
Isoform_136703_3	chr4	-	331	1	Antisense	novelGene_ENSMUSG00000028580.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAAAGTGTCAAGCAATTG	NA	False	NA	NA	False	NA	NA	NA	130499200	130498869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_130498900_130499200
Isoform_13671_16	chr11	-	2195	14	FSM	ENSMUSG00000020904.12	ENSMUST00000021287.12	2199	14	7	-3	7	1	multi-exon	TRUE	canonical	0	0	junction_9	5.45557637738374	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTCTGTGTCTCACA	NA	False	NA	NA	False	AATAAA	-21	NA	67856461	67815630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_67816095_67817204_67817317_67818134_67818238_67821554_67821707_67822549_67822696_67826649_67826799_67829742_67829914_67830604_67830706_67836178_67836296_67837123_67837224_67840393_67840523_67844306_67844444_67844797_67844998_67856347
Isoform_136725_6	chr4	+	177	1	Intergenic	novelGene_7952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	791	False	NA	NA	False	NA	NA	NA	130906043	130906220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_130906000_130906200
Isoform_136729_17	chr4	-	176	1	Intergenic	novelGene_7953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATAGGTGC	NA	False	NA	NA	False	NA	NA	NA	131625649	131625473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_131625500_131625600
Isoform_136733_23	chr4	-	171	1	Intergenic	novelGene_7954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	131760798	131760627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_131760600_131760800
Isoform_136735_15	chr4	-	166	1	Intergenic	novelGene_7955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	131877387	131877221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_131877200_131877400
Isoform_136736_25	chr4	+	184	1	Intergenic	novelGene_7956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGATAATAGATTACA	NA	False	NA	NA	False	NA	NA	NA	131888787	131888971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_131888800_131889000
Isoform_136739_47	chr4	+	172	1	Intergenic	novelGene_7957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTTAAAAAAAAATATATA	NA	False	NA	NA	False	NA	NA	NA	131905150	131905322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_131905200_131905300
Isoform_136740_15	chr4	+	561	1	Antisense	novelGene_ENSMUSG00000040025.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCATTATGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	131913375	131913936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_131913400_131913900
Isoform_136741_3	chr4	+	2910	1	Intergenic	novelGene_7958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131916681	131919591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_131916700_131919600
Isoform_136746_15	chr4	-	174	1	Intergenic	novelGene_7959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAACAGTTGAAGA	NA	False	NA	NA	False	NA	NA	NA	131996945	131996771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_131996800_131996900
Isoform_136750_4	chr4	-	1169	1	Genic_Genomic	ENSMUSG00000089687.3	novel	NA	NA	NA	NA	23	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	132030673	132029504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_132029500_132030700
Isoform_136751_26	chr4	+	308	1	Intergenic	novelGene_7961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAACAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	132031018	132031326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132031000_132031300
Isoform_136752_35	chr4	+	189	1	Intergenic	novelGene_7960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTTTAATCCCAGCATTT	NA	False	NA	21	True	NA	NA	NA	132031018	132031207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132031000_132031200
Isoform_136754_4	chr4	+	458	1	NIC	ENSMUSG00000086290.10	novel	896	4	NA	NA	0	-1157	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGTCAGGA	NA	False	NA	NA	False	ATTAAA	-5	NA	132035986	132036444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_132036000_132036400
Isoform_13676_129	chr11	-	5884	7	FSM	ENSMUSG00000020902.13	ENSMUST00000021284.4	5738	7	-153	7	33	-7	multi-exon	FALSE	canonical	3	78	junction_5	10.7922297150414	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCCCAGCCTTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	68277805	68100196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68277435
Isoform_136761_7	chr4	+	215	1	Intergenic	novelGene_7963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAGCCTGGTCTACAA	NA	False	NA	NA	False	NA	NA	NA	132063793	132064008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132063800_132064000
Isoform_136765_147	chr4	-	1700	1	FSM	ENSMUSG00000065353.3	ENSMUST00000083419.3	205	1	-1107	-388	-1107	388	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132079200_132080900
Isoform_136768_243	chr4	-	371	1	FSM	ENSMUSG00000065353.3	ENSMUST00000083419.3	205	1	-173	7	-173	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAATTTAAATTCCTA	NA	False	NA	NA	False	NA	NA	NA	132080010	132079639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_132079600_132080000
Isoform_136770_26	chr4	-	178	1	Intergenic	novelGene_7964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132090070	132089892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132089900_132090100
Isoform_136772_6	chr4	+	179	1	Intergenic	novelGene_7965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	132099026	132099205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132099000_132099200
Isoform_136773_3	chr4	+	342	1	Intergenic	novelGene_7966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	NA	False	NA	NA	False	NA	NA	NA	132100164	132100506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132100200_132100500
Isoform_136774_8	chr4	+	182	1	Intergenic	novelGene_7967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGCCTTGTTTAGTTGT	NA	False	NA	NA	False	NA	NA	NA	132113755	132113937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132113800_132113900
Isoform_136776_3	chr4	-	170	1	Intergenic	novelGene_7968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTC	NA	False	NA	NA	False	NA	NA	NA	132127113	132126943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132126900_132127100
Isoform_136779_8	chr4	-	183	1	Intergenic	novelGene_7969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAACAAAAAAAA	9532	False	NA	NA	False	NA	NA	NA	132177060	132176877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132176900_132177100
Isoform_136781_18	chr4	+	174	1	Intergenic	novelGene_7970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGACA	NA	False	NA	NA	False	NA	NA	NA	132212860	132213034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132212900_132213000
Isoform_136782_60	chr4	-	176	1	Intergenic	novelGene_7971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAATAAA	6017	False	NA	NA	False	NA	NA	NA	132214452	132214276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132214300_132214500
Isoform_136792_7	chr4	-	192	1	Intergenic	novelGene_7972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGACAGGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	132240471	132240279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132240300_132240500
Isoform_136794_12	chr4	+	168	1	Intergenic	novelGene_7974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	132246107	132246275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132246100_132246300
Isoform_136795_17	chr4	+	177	1	Intergenic	novelGene_7975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGTGATAGG	NA	False	NA	NA	False	NA	NA	NA	132252853	132253030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132252900_132253000
Isoform_136796_45	chr4	+	180	1	Intergenic	novelGene_7976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATTTGTTA	NA	False	NA	NA	False	NA	NA	NA	132254929	132255109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132254900_132255100
Isoform_13680_6	chr11	-	5957	7	ISM	ENSMUSG00000020902.13	ENSMUST00000108674.9	5874	8	-2	5	-2	-5	intron_retention	TRUE	canonical	0	0	junction_6	36.3073301445069	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCCAGCCTTTCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	68291651	68100194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68291210
Isoform_136806_3	chr4	+	343	1	Intergenic	novelGene_7977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	132284485	132284828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132284500_132284800
Isoform_136808_12	chr4	-	175	1	Intergenic	novelGene_7978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATGCTTATGAG	NA	False	NA	NA	False	NA	NA	NA	132332964	132332789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132332800_132333000
Isoform_136809_54	chr4	-	176	1	Intergenic	novelGene_7979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAATTATTGCTA	NA	False	NA	NA	False	NA	NA	NA	132334936	132334760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132334800_132334900
Isoform_136811_71	chr4	+	179	1	Intergenic	novelGene_7981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTGGAAAAAAA	7260	False	NA	NA	False	NA	NA	NA	132359032	132359211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132359000_132359200
Isoform_136812_8	chr4	-	175	1	Intergenic	novelGene_7982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATGGGAATT	7910	False	NA	NA	False	NA	NA	NA	132390300	132390125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132390100_132390300
Isoform_136813_16	chr4	-	170	1	Intergenic	novelGene_7983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATAAAAATAAATA	7182	False	NA	NA	False	NA	NA	NA	132391028	132390858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132390900_132391000
Isoform_136814_6	chr4	-	219	1	Intergenic	novelGene_7984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGTACTGTGTGCTAC	NA	False	NA	NA	False	NA	NA	NA	132409918	132409699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132409700_132409900
Isoform_136815_3	chr4	-	720	1	Intergenic	novelGene_7985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCTCTCCATAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	132426105	132425385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132425400_132426100
Isoform_136818_3	chr4	-	177	1	Intergenic	novelGene_7986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGTCACT	NA	False	NA	NA	False	NA	NA	NA	132474316	132474139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132474100_132474300
Isoform_136819_4	chr4	-	204	1	Intergenic	novelGene_7987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	132475875	132475671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132475700_132475900
Isoform_136820_22	chr4	-	168	1	Intergenic	novelGene_7988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	132486493	132486325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132486300_132486500
Isoform_136821_7	chr4	+	176	1	Intergenic	novelGene_7989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTGAAAAAAA	2970	False	NA	NA	False	NA	NA	NA	132518795	132518971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132518800_132519000
Isoform_136822_4	chr4	-	185	1	Intergenic	novelGene_7990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCGAGACAGGGTTT	9213	False	NA	NA	False	NA	NA	NA	132526218	132526033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132526000_132526200
Isoform_136823_9	chr4	+	345	1	Intergenic	novelGene_7991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	96	False	NA	NA	False	NA	NA	NA	132530842	132531187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132530800_132531200
Isoform_136829_62	chr9	-	176	1	Intergenic	novelGene_11729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114804357	114804181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_114804200_114804400
Isoform_13683_26	chr11	-	2371	10	NIC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	31	-15	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	74.7099742130432	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGTC	NA	False	NA	NA	False	AATAAA	-9	NA	68743930	68712274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_68713492_68716995_68717031_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
Isoform_136830_70	chr4	-	1602	1	Intergenic	novelGene_7448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACTAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-5	NA	24558301	24556699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_24556700_24558300
Isoform_136832_36	chr4	+	225	1	Intergenic	novelGene_7992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTGATTTTTTTTTTC	6988	False	NA	NA	False	AATAAA	-7	NA	132588485	132588710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132588500_132588700
Isoform_136833_17	chr4	+	1652	1	Genic_Genomic	ENSMUSG00000083816.4	novel	NA	NA	NA	NA	-215	-427	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAAAAAATCG	231	False	NA	NA	False	NA	NA	NA	132611858	132613510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_132611900_132613500
Isoform_136835_27	chr4	+	196	1	Intergenic	novelGene_7993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAGAAAAGAAAG	6988	False	NA	NA	False	NA	NA	NA	132618615	132618811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132618600_132618800
Isoform_136837_17	chr4	-	174	1	Intergenic	novelGene_7449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATGTTGGCAAGA	NA	False	NA	NA	False	NA	NA	NA	24579782	24579608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_24579600_24579800
Isoform_136839_54	chr4	+	268	1	Intergenic	novelGene_7994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCATTAAATTTTGGGGT	1631	False	NA	NA	False	NA	NA	NA	132625957	132626225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132626000_132626200
Isoform_136841_7	chr4	-	177	1	Intergenic	novelGene_7995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	7819	False	NA	NA	False	NA	NA	NA	132631075	132630898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132630900_132631100
Isoform_136843_8	chr4	+	3830	1	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGAGGTGGTGGCAC	5578	False	NA	NA	False	TTTAAA	-22	NA	132644651	132648481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_132644700_132648500
Isoform_136844_142	chr4	+	176	1	Intergenic	novelGene_7997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTGC	NA	False	NA	NA	False	NA	NA	NA	132654049	132654225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132654000_132654200
Isoform_136845_3	chr4	+	165	1	Intergenic	novelGene_7998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTTTTTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	132684884	132685049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132684900_132685000
Isoform_136848_10	chr4	-	168	1	Intergenic	novelGene_8000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAAGAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	132705842	132705674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132705700_132705800
Isoform_13685_402	chr11	-	2297	9	FSM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	70	15	-24	-15	multi-exon	FALSE	canonical	3	185	junction_5	15.9530561335438	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGTC	NA	False	NA	NA	False	AATAAA	-9	NA	68743891	68712274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
Isoform_136850_6	chr4	-	156	1	Intergenic	novelGene_8001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTTAG	8163	False	NA	NA	False	NA	NA	NA	132726683	132726527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132726500_132726700
Isoform_136852_45	chr4	+	177	1	Intergenic	novelGene_8002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	1752	False	NA	NA	False	NA	NA	NA	132733586	132733763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132733600_132733800
Isoform_136853_3	chr4	+	296	1	Genic_Genomic	ENSMUSG00000037692.15	novel	NA	NA	NA	NA	-3	-43248	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGGCAGAGAGAGAGA	1223	False	NA	NA	False	NA	NA	NA	132738850	132739146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_132738800_132739100
Isoform_136854_3	chr4	-	2411	1	Intergenic	novelGene_8003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	132766524	132764113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132764100_132766500
Isoform_136855_3	chr4	-	3209	1	Intergenic	novelGene_8004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132798789	132795580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132795600_132798800
Isoform_136857_10	chr4	-	189	1	Intergenic	novelGene_8005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTAAAAAAAAAGTCTAAG	9797	False	NA	NA	False	NA	NA	NA	132874722	132874533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132874500_132874700
Isoform_136858_5	chr4	-	207	1	Intergenic	novelGene_8006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	AAGAAA	-34	NA	132889191	132888984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132889000_132889200
Isoform_136877_4	chr4	-	1524	1	Antisense	novelGene_ENSMUSG00000028862.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATATGTTGGGGCTT	NA	False	NA	NA	False	NA	NA	NA	132968745	132967221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_132967200_132968700
Isoform_13689_6	chr11	-	3342	17	FSM	ENSMUSG00000052921.14	ENSMUST00000108671.2	4372	17	17	1013	17	357	multi-exon	FALSE	canonical	2	6	junction_4	3.00974978195863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGGCTACTTTCTT	6002	False	NA	NA	False	ATTAAA	-16	NA	68848289	68834995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
Isoform_136892_208	chr4	-	178	1	Intergenic	novelGene_8007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	133033631	133033453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_133033500_133033600
Isoform_136897_24	chr4	+	175	1	Intergenic	novelGene_8008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	4685	False	NA	NA	False	NA	NA	NA	133082210	133082385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133082200_133082400
Isoform_136898_7	chr4	+	178	1	Intergenic	novelGene_8009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAGAAAAAA	7663	False	NA	NA	False	NA	NA	NA	133104522	133104700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133104500_133104700
Isoform_13690_4	chr11	-	4351	17	FSM	ENSMUSG00000052921.14	ENSMUST00000108671.2	4372	17	17	4	17	-4	multi-exon	FALSE	canonical	2	6	junction_4	3.00974978195863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCAGTGGTCTAAAAAC	6002	False	NA	-6	True	NA	NA	NA	68848289	68833986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
Isoform_136901_4	chr4	-	2880	1	NIC	ENSMUSG00000056596.9	novel	1654	2	NA	NA	0	-4553	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133225861	133222981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_133223000_133225900
Isoform_136902_5	chr4	+	183	1	Intergenic	novelGene_8010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAATTAATTA	NA	False	NA	NA	False	NA	NA	NA	133239985	133240168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133240000_133240200
Isoform_136907_8	chr4	+	1984	2	NNC	ENSMUSG00000028850.3	novel	2004	7	NA	NA	7	-6249	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	133302062	133304072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_133303347_133303372
Isoform_136909_7	chr4	-	175	1	Intergenic	novelGene_8011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	133315020	133314845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_133314800_133315000
Isoform_136913_483	chr4	-	1276	1	FSM	ENSMUSG00000047281.4	ENSMUST00000057311.4	1613	1	337	0	337	0	mono-exon	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTTCAGTTATTGGC	NA	False	NA	-10	True	AATAAA	-18	NA	133329142	133327866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133327900_133329100
Isoform_136914_54	chr4	-	1340	1	FSM	ENSMUSG00000047281.4	ENSMUST00000057311.4	1613	1	273	0	273	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTTCAGTTATTGGC	10003	False	NA	-10	True	AATAAA	-18	NA	133329206	133327866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133327900_133329200
Isoform_136915_6	chr4	-	1491	1	FSM	ENSMUSG00000047281.4	ENSMUST00000057311.4	1613	1	120	2	120	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTTCTTCAGTTATTG	9949	False	NA	-12	True	AATAAA	-16	NA	133329359	133327868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_133327900_133329400
Isoform_136922_85	chr4	+	177	1	Intergenic	novelGene_8012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CATTTAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	133354750	133354927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133354800_133354900
Isoform_136923_79	chr4	-	214	1	Intergenic	novelGene_8013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGTCACAGCAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	133382832	133382618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_133382600_133382800
Isoform_13694_20	chr11	-	982	4	NIC	ENSMUSG00000032892.15	novel	820	5	NA	NA	3	1	intron_retention	FALSE	canonical	3	482	junction_2	50.8876758710354	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGTGCCTTCAAATC	7239	False	NA	-4	True	AATAAA	-20	NA	68864666	68863311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_68863568_68863768_68863855_68863942_68864384_68864467
Isoform_136940_3	chr4	+	186	1	Intergenic	novelGene_8014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	133508758	133508944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133508800_133508900
Isoform_136943_9	chr4	+	158	1	Intergenic	novelGene_8015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133529430	133529588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133529400_133529600
Isoform_136946_8	chr4	+	167	1	Intergenic	novelGene_8017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAATTGAAAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	133552196	133552363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133552200_133552400
Isoform_13695_669	chr11	-	814	5	FSM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	3	3	3	0	multi-exon	FALSE	canonical	3	482	junction_2	47.2989164780759	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGTGCCTTCAAAT	7239	False	NA	-5	True	AATAAA	-19	NA	68864666	68863312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266_68864384_68864467
Isoform_136952_18	chr4	-	158	1	Intergenic	novelGene_8018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAACTTCACTGA	6487	False	NA	NA	False	NA	NA	NA	133654400	133654242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_133654200_133654400
Isoform_136953_71	chr4	-	176	1	Intergenic	novelGene_8019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAGAAAA	9915	False	NA	NA	False	NA	NA	NA	133664176	133664000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_133664000_133664200
Isoform_136954_187	chr4	-	182	1	Intergenic	novelGene_8020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAATAAAA	9073	False	NA	NA	False	NA	NA	NA	133677610	133677428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_133677400_133677600
Isoform_136957_26	chr4	+	5561	1	Intergenic	novelGene_8021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133683949	133689510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133683900_133689500
Isoform_136973_133	chr4	-	158	1	Intergenic	novelGene_8022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAGAGAGAGAGA	NA	False	NA	-9	True	NA	NA	NA	133768814	133768656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_133768700_133768800
Isoform_136979_32	chr4	+	243	1	Intergenic	novelGene_7450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-6	NA	25304362	25304605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_25304400_25304600
Isoform_136981_3	chr4	-	182	1	Intergenic	novelGene_8023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATGTATGACTGT	NA	False	NA	NA	False	NA	NA	NA	133915822	133915640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_133915600_133915800
Isoform_136982_102	chr4	+	177	1	Intergenic	novelGene_8024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAGACATGCTG	NA	False	NA	NA	False	NA	NA	NA	133916416	133916593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133916400_133916600
Isoform_136985_33	chr4	-	173	1	Intergenic	novelGene_8025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	1783	False	NA	NA	False	NA	NA	NA	133966833	133966660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_133966700_133966800
Isoform_136991_5	chr4	-	1213	1	NIC	ENSMUSG00000050105.6	novel	1226	2	NA	NA	699	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGGACCATGAGTTT	5196	False	NA	-25	True	AATAAA	-16	NA	133979635	133978422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_133978400_133979600
Isoform_136999_26	chr4	-	235	1	Intergenic	novelGene_8026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACAGGCTGGGGAGATG	NA	False	NA	NA	False	NA	NA	NA	134051453	134051218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_134051200_134051500
Isoform_137000_5	chr4	+	153	1	Intergenic	novelGene_8027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATAATAAATAAATAAAT	1404	False	NA	NA	False	NA	NA	NA	134062168	134062321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_134062200_134062300
Isoform_137002_10	chr4	+	177	1	Intergenic	novelGene_8028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATCTTAAAAAAAAA	119	False	NA	NA	False	NA	NA	NA	134121970	134122147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_134122000_134122100
Isoform_137004_5	chr4	+	3357	1	FSM	ENSMUSG00002075520.1	ENSMUST00020182056.1	91	1	35	-3301	35	3301	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAACTAAT	NA	False	NA	NA	False	NA	NA	NA	134195709	134199066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_134195700_134199100
Isoform_137005_8	chr4	+	1344	2	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	23	-11541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAAAAAACCAAACCA	NA	False	NA	NA	False	NA	NA	NA	134238332	134239697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_134239383_134239403
Isoform_137007_16	chr4	+	176	1	Intergenic	novelGene_7451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACAATTAGCCATAAG	NA	False	NA	NA	False	NA	NA	NA	25780377	25780553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_25780400_25780600
Isoform_137009_59	chr4	+	178	1	Intergenic	novelGene_8031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	8164	False	NA	NA	False	NA	NA	NA	134255119	134255297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_134255100_134255300
Isoform_137010_3	chr4	-	167	1	Intergenic	novelGene_8032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134268883	134268716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_134268700_134268900
Isoform_137012_5	chr4	-	194	1	Intergenic	novelGene_8033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	134446597	134446403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_134446400_134446600
Isoform_137013_7	chr4	-	2577	1	NIC	ENSMUSG00000037295.8	novel	6549	9	NA	NA	3	-16029	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	134495332	134492755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_134492800_134495300
Isoform_137014_10	chr4	-	158	1	Intergenic	novelGene_8034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAAACTCAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	134498415	134498257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_134498300_134498400
Isoform_137017_43	chr4	+	175	1	Intergenic	novelGene_8035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAATGGTTCT	8705	False	NA	NA	False	NA	NA	NA	134557069	134557244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_134557100_134557200
Isoform_137019_6	chr4	+	157	1	Intergenic	novelGene_8036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	134614867	134615024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_134614900_134615000
Isoform_137023_15	chr4	-	178	1	Intergenic	novelGene_8037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAAAAATGC	NA	False	NA	NA	False	NA	NA	NA	134649629	134649451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_134649500_134649600
Isoform_137060_301	chr4	-	923	1	NIC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	51	-48377	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAGAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135000074	134999151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_134999200_135000100
Isoform_137061_58	chr4	-	946	1	NIC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	28	-48377	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAGAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135000097	134999151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_134999200_135000100
Isoform_137063_3	chr4	-	172	1	Intergenic	novelGene_8038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATTAATTAA	NA	False	NA	NA	False	NA	NA	NA	135012754	135012582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135012600_135012800
Isoform_137064_44	chr4	-	169	1	Intergenic	novelGene_8039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135017536	135017367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135017400_135017500
Isoform_137066_42	chr4	-	176	1	Intergenic	novelGene_8040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTGGTAGGAGA	NA	False	NA	NA	False	NA	NA	NA	135031522	135031346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135031300_135031500
Isoform_137072_5	chr4	-	273	1	Intergenic	novelGene_7452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTTCCTTGACCAAGG	NA	False	NA	NA	False	NA	NA	NA	26611224	26610951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_26611000_26611200
Isoform_137074_4	chr4	-	205	1	Intergenic	novelGene_7939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGGTCCTGAGTTCAA	NA	False	NA	NA	False	NA	NA	NA	129699969	129699764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_129699800_129700000
Isoform_137075_25	chr4	+	182	1	Intergenic	novelGene_8041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATACAATAGT	NA	False	NA	NA	False	NA	NA	NA	135075538	135075720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_135075500_135075700
Isoform_137076_49	chr4	+	175	1	Intergenic	novelGene_8042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTCCGAGACA	NA	False	NA	NA	False	NA	NA	NA	135082294	135082469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_135082300_135082500
Isoform_137078_4	chr4	+	3483	1	Antisense	novelGene_ENSMUSG00000081136.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8468	False	NA	NA	False	NA	NA	NA	135129396	135132879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_135129400_135132900
Isoform_137079_8	chr4	-	176	1	Intergenic	novelGene_8043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTTTGG	NA	False	NA	NA	False	NA	NA	NA	135150017	135149841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135149800_135150000
Isoform_137084_6	chr4	-	178	1	Intergenic	novelGene_8044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGAGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	135360507	135360329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135360300_135360500
Isoform_137085_6	chr4	+	176	1	Intergenic	novelGene_8045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATTATAT	9219	False	NA	NA	False	NA	NA	NA	135366948	135367124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_135366900_135367100
Isoform_137089_27	chr4	-	185	1	Intergenic	novelGene_7453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	27792680	27792495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_27792500_27792700
Isoform_137090_10	chr4	-	156	1	Intergenic	novelGene_8046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	135550416	135550260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135550300_135550400
Isoform_137102_5	chr4	+	2082	1	ISM	ENSMUSG00000028676.18	ENSMUST00000126641.2	3754	6	12067	13	4519	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAATCTTGGT	NA	False	NA	10	True	AATAAA	-15	NA	135595124	135597206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_135595100_135597200
Isoform_137103_5	chr4	+	1573	1	ISM	ENSMUSG00000028676.18	ENSMUST00000126641.2	3754	6	12578	11	5030	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTTGGTTT	NA	False	NA	12	True	AATAAA	-17	NA	135595635	135597208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_135595600_135597200
Isoform_137104_12	chr4	-	3693	1	Genic_Genomic	ENSMUSG00000028675.13	novel	NA	NA	NA	NA	-243	517	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-38	NA	135601404	135597711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_135597700_135601400
Isoform_137107_5	chr4	+	173	1	Intergenic	novelGene_7454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAAAAGAATAAGAC	NA	False	NA	NA	False	NA	NA	NA	27904866	27905039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_27904900_27905000
Isoform_137108_32	chr4	+	174	1	Intergenic	novelGene_8047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAACAAAAAAATTAAAGATT	NA	False	NA	NA	False	NA	NA	NA	135617914	135618088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_135617900_135618100
Isoform_137109_4	chr4	+	528	1	NIC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	24	-13434	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	135648069	135648597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_135648100_135648600
Isoform_137111_22	chr4	+	225	1	Intergenic	novelGene_8048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTCTTGCCAATAGA	NA	False	NA	NA	False	NA	NA	NA	135649711	135649936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_135649700_135649900
Isoform_137113_9	chr4	-	174	1	Intergenic	novelGene_8049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135684710	135684536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135684500_135684700
Isoform_137115_8	chr4	+	180	1	Intergenic	novelGene_8050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAACAACCC	NA	False	NA	NA	False	NA	NA	NA	135720234	135720414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_135720200_135720400
Isoform_137120_46	chr4	-	173	1	Intergenic	novelGene_8051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTTTGTTGGG	NA	False	NA	NA	False	NA	NA	NA	135787858	135787685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135787700_135787900
Isoform_137121_4	chr4	-	173	1	Intergenic	novelGene_8052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135792030	135791857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135791900_135792000
Isoform_137124_34	chr4	-	150	1	Intergenic	novelGene_8053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAACAAAGGAG	6524	False	NA	NA	False	NA	NA	NA	135891965	135891815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135891800_135892000
Isoform_137125_8	chr4	+	3428	1	Genic_Genomic	ENSMUSG00000018983.10	novel	NA	NA	NA	NA	-119	-11105	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACATAATTAAAAAAAAAAA	937	False	NA	NA	False	NA	NA	NA	135899585	135903013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_135899600_135903000
Isoform_137127_7	chr4	-	188	1	Intergenic	novelGene_8054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCAGTGGTGGCGCAT	NA	False	NA	NA	False	NA	NA	NA	135953101	135952913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135952900_135953100
Isoform_137128_4	chr4	+	180	1	Intergenic	novelGene_8055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAGAAATACCTC	5340	False	NA	NA	False	NA	NA	NA	135953761	135953941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_135953800_135953900
Isoform_137130_4	chr4	-	182	1	Intergenic	novelGene_8056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGAGTGTGGTG	7531	False	NA	NA	False	NA	NA	NA	135980565	135980383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_135980400_135980600
Isoform_137131_12	chr4	-	168	1	Intergenic	novelGene_8057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAATAGTGC	1286	False	NA	NA	False	NA	NA	NA	136027586	136027418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_136027400_136027600
Isoform_137132_12	chr4	+	179	1	Intergenic	novelGene_7457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTTTA	NA	False	NA	NA	False	NA	NA	NA	31983461	31983640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_31983500_31983600
Isoform_137134_18	chr4	-	178	1	Intergenic	novelGene_8058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	784	False	NA	NA	False	NA	NA	NA	136052595	136052417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_136052400_136052600
Isoform_137135_20	chr4	-	742	1	Intergenic	novelGene_8059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	136065081	136064339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_136064300_136065100
Isoform_137140_19	chr4	+	197	1	Intergenic	novelGene_8061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTGGCAAAAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	136116349	136116546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_136116300_136116500
Isoform_137141_84	chr4	+	182	1	Intergenic	novelGene_8062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGGGGGATGGGG	NA	False	NA	NA	False	NA	NA	NA	136117743	136117925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_136117700_136117900
Isoform_137142_7	chr4	+	174	1	Intergenic	novelGene_8063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGTGGGACT	NA	False	NA	NA	False	NA	NA	NA	136133122	136133296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_136133100_136133300
Isoform_137143_5	chr4	+	172	1	Intergenic	novelGene_8064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTC	3412	False	NA	NA	False	NA	NA	NA	136184565	136184737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_136184600_136184700
Isoform_137145_82	chr4	-	155	1	Intergenic	novelGene_8065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	136208674	136208519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_136208500_136208700
Isoform_137146_3	chr4	-	370	1	Intergenic	novelGene_8066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	136220439	136220069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_136220100_136220400
Isoform_137157_56	chr4	+	171	1	Intergenic	novelGene_8067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGCTTCAGTTAGCC	NA	False	NA	NA	False	NA	NA	NA	136331055	136331226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_136331100_136331200
Isoform_137158_11	chr4	-	177	1	Antisense	novelGene_ENSMUSG00000103119.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATATATTT	NA	False	NA	NA	False	NA	NA	NA	136368921	136368744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_136368700_136368900
Isoform_137159_3	chr4	-	155	1	Intergenic	novelGene_8068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	136487488	136487333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_136487300_136487500
Isoform_137161_8	chr4	+	175	1	Intergenic	novelGene_8069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAACATAAAATAC	NA	False	NA	NA	False	NA	NA	NA	136587588	136587763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_136587600_136587800
Isoform_137163_3	chr4	-	997	1	ISM	ENSMUSG00000060862.11	ENSMUST00000049583.8	7192	19	67961	6	10928	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAACTGTGGCTTGTGTG	NA	False	NA	-4	True	AATAAA	-14	NA	136708045	136707048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_136707000_136708000
Isoform_137164_31	chr4	-	186	1	Intergenic	novelGene_8070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	136715728	136715542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_136715500_136715700
Isoform_137165_7	chr4	-	210	1	Intergenic	novelGene_8071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATTTAAAACATGAAGTG	8799	False	NA	NA	False	NA	NA	NA	136810876	136810666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_136810700_136810900
Isoform_137174_5	chr4	+	1777	1	Intergenic	novelGene_8072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATCCAA	NA	False	NA	NA	False	NA	NA	NA	137081852	137083629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_137081900_137083600
Isoform_137175_624	chr4	+	177	1	Intergenic	novelGene_8073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	624	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCAAGGCCG	NA	False	NA	NA	False	NA	NA	NA	137090672	137090849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_137090700_137090800
Isoform_137177_25	chr4	+	157	1	Intergenic	novelGene_8074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAATTTAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	137100189	137100346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_137100200_137100300
Isoform_137180_19	chr4	-	177	1	Intergenic	novelGene_8075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTTTAAAAAGTAAAGA	NA	False	NA	NA	False	NA	NA	NA	137119738	137119561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137119600_137119700
Isoform_137181_24	chr4	-	165	1	Intergenic	novelGene_8076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAAAATGCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	137123390	137123225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137123200_137123400
Isoform_137185_10	chr4	-	175	1	Intergenic	novelGene_8077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	6733	False	NA	NA	False	NA	NA	NA	137242384	137242209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137242200_137242400
Isoform_137186_3	chr4	+	205	1	Intergenic	novelGene_8078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	137255509	137255714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_137255500_137255700
Isoform_137188_4	chr4	-	343	1	Intergenic	novelGene_8079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8519	False	NA	NA	False	NA	NA	NA	137317036	137316693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137316700_137317000
Isoform_137189_3	chr4	+	174	1	Intergenic	novelGene_8080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGAGTGACCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	137319504	137319678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_137319500_137319700
Isoform_137192_4	chr4	-	4496	2	Antisense	novelGene_ENSMUSG00000043411.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGGAGGATATTCCAC	7488	False	NA	NA	False	NA	NA	NA	137328653	137324131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_137327343_137327368
Isoform_137194_4	chr4	-	228	1	Intergenic	novelGene_8081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGTCTAAAATAGCAC	2758	False	NA	NA	False	NA	NA	NA	137342499	137342271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137342300_137342500
Isoform_137196_38	chr4	-	179	1	Intergenic	novelGene_8082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	137345390	137345211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137345200_137345400
Isoform_137212_3	chr4	+	166	1	Intergenic	novelGene_8083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTTAAAAAAAAACTGAAT	1609	False	NA	NA	False	NA	NA	NA	137390308	137390474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_137390300_137390500
Isoform_137213_10	chr4	+	206	1	Intergenic	novelGene_8084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAGATAAATA	8726	False	NA	NA	False	NA	NA	NA	137397425	137397631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_137397400_137397600
Isoform_137214_29	chr4	-	181	1	Intergenic	novelGene_8085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGTGGATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	137453615	137453434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137453400_137453600
Isoform_137222_6	chr4	-	5105	2	Genic_Genomic	ENSMUSG00000028766.11	novel	2522	12	NA	NA	65	-32505	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137523630	137518491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_137522736_137522769
Isoform_137223_3	chr4	-	5212	1	Genic_Genomic	ENSMUSG00000028766.11	novel	NA	NA	NA	NA	-6	-32503	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137523701	137518489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_137518500_137523700
Isoform_137224_29	chr4	+	176	1	Intergenic	novelGene_8086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATTCAGGGCCA	8478	False	NA	NA	False	NA	NA	NA	137519562	137519738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_137519600_137519700
Isoform_137225_8	chr4	-	188	1	Intergenic	novelGene_8087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCAGCTCTTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	137538315	137538127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137538100_137538300
Isoform_137229_10	chr4	-	1798	1	Intergenic	novelGene_7455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6746	False	NA	NA	False	NA	NA	NA	31963833	31962035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_31962000_31963800
Isoform_137230_3	chr4	-	2025	1	Intergenic	novelGene_7456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	6517	False	NA	NA	False	NA	NA	NA	31964062	31962037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_31962000_31964100
Isoform_137232_6	chr4	-	169	1	Intergenic	novelGene_8088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAAAGA	NA	False	NA	NA	False	NA	NA	NA	137694503	137694334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137694300_137694500
Isoform_137233_79	chr4	-	166	1	Intergenic	novelGene_8089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAATA	2270	False	NA	NA	False	NA	NA	NA	137740159	137739993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137740000_137740200
Isoform_137234_122	chr4	-	182	1	Intergenic	novelGene_8090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	920	False	NA	NA	False	NA	NA	NA	137741509	137741327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_137741300_137741500
Isoform_137239_4	chr4	-	172	1	Antisense	novelGene_ENSMUSG00000028759.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	137954848	137954676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_137954700_137954800
Isoform_137242_7	chr4	-	168	1	Intergenic	novelGene_8091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	138086144	138085976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_138086000_138086100
Isoform_137243_16	chr4	-	165	1	Intergenic	novelGene_8092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGAGTGAGCAGGGCA	NA	False	NA	NA	False	NA	NA	NA	138087954	138087789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_138087800_138088000
Isoform_137244_11	chr4	-	2356	1	FSM	ENSMUSG00000078235.4	ENSMUST00000105032.4	2437	1	77	4	77	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACCCCTCCTGTGTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	138123762	138121406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_138121400_138123800
Isoform_137245_6	chr4	+	176	1	Intergenic	novelGene_8093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGGCTTAATT	NA	False	NA	NA	False	NA	NA	NA	138125027	138125203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_138125000_138125200
Isoform_137246_15	chr4	+	180	1	Intergenic	novelGene_8094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAACCATTATCTTC	4102	False	NA	NA	False	NA	NA	NA	138130605	138130785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_138130600_138130800
Isoform_137247_13	chr4	-	162	1	Intergenic	novelGene_7395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGCGAATTACATTGA	NA	False	NA	NA	False	NA	NA	NA	5208607	5208445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_5208400_5208600
Isoform_137250_8	chr4	+	1118	1	ISM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	2712	1980	2712	-1980	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTTCGTTAGCCTTGTT	8456	False	NA	18	True	AATAAA	-18	NA	138184336	138185454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_138184300_138185500
Isoform_137251_6	chr4	-	163	1	Intergenic	novelGene_8095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTCAGGAAGAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	138214363	138214200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_138214200_138214400
Isoform_137252_53	chr4	+	205	1	Intergenic	novelGene_8097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTCGATAATAATAATAAA	NA	False	NA	33	True	NA	NA	NA	138551717	138551922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_138551700_138551900
Isoform_137253_3	chr4	+	165	1	Intergenic	novelGene_8098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATCCGCC	NA	False	NA	NA	False	NA	NA	NA	138584605	138584770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_138584600_138584800
Isoform_137254_47	chr4	+	205	1	Intergenic	novelGene_8099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTGGGATGCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	138702063	138702268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_138702100_138702300
Isoform_137257_26	chr4	+	173	1	Intergenic	novelGene_8100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAATATATGA	NA	False	NA	NA	False	NA	NA	NA	138860712	138860885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_138860700_138860900
Isoform_137258_23	chr4	-	173	1	Intergenic	novelGene_8101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGCCAG	NA	False	NA	NA	False	NA	NA	NA	138865875	138865702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_138865700_138865900
Isoform_137260_61	chr4	-	3049	1	Intergenic	novelGene_8102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139001078	138998029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_138998000_139001100
Isoform_137263_33	chr4	+	171	1	Intergenic	novelGene_8103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTTCAA	NA	False	NA	NA	False	NA	NA	NA	139020470	139020641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_139020500_139020600
Isoform_137266_7	chr4	-	860	1	Intergenic	novelGene_8104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGCCACTTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	139047354	139046494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_139046500_139047400
Isoform_137270_9	chr4	-	180	1	Intergenic	novelGene_8105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGTTTTTTTTTATG	8635	False	NA	NA	False	NA	NA	NA	139084416	139084236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_139084200_139084400
Isoform_137273_11	chr4	-	2375	1	Antisense	novelGene_ENSMUSG00000066036.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9299	False	NA	NA	False	NA	NA	NA	139177273	139174898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_139174900_139177300
Isoform_137274_114	chr11	-	180	1	Intergenic	novelGene_1308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	4274145	4273965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_4274000_4274100
Isoform_137275_5	chr4	-	202	1	Intergenic	novelGene_8107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGATTGAAGGGCTCCA	NA	False	NA	NA	False	AAGAAA	-10	NA	139298850	139298648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_139298600_139298800
Isoform_137277_3	chr4	+	3035	1	ISM	ENSMUSG00000041025.16	ENSMUST00000040023.16	5227	11	85655	1	42624	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACATGGTTTATGCTGCT	6349	False	NA	9	True	AATAAA	-15	NA	139344654	139347689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_139344700_139347700
Isoform_137278_6	chr4	+	180	1	Intergenic	novelGene_8108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTACCTTTTGGTTTGG	1645	False	NA	NA	False	NA	NA	NA	139354250	139354430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_139354200_139354400
Isoform_137281_40	chr4	+	177	1	Intergenic	novelGene_7458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGTCACCGACCT	NA	False	NA	NA	False	NA	NA	NA	32572572	32572749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_32572600_32572700
Isoform_137282_13	chr4	-	6198	1	FSM	ENSMUSG00000078234.7	ENSMUST00000105031.4	7807	1	401	1208	401	-1208	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	139694936	139688738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_139688700_139694900
Isoform_137287_15	chr4	+	176	1	Intergenic	novelGene_8109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATTCTA	4793	False	NA	NA	False	NA	NA	NA	139928250	139928426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_139928200_139928400
Isoform_137288_8	chr4	-	176	1	Intergenic	novelGene_8110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAGAAACTGCA	NA	False	NA	NA	False	NA	NA	NA	140027712	140027536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_140027500_140027700
Isoform_137290_4	chr4	-	3532	1	Intergenic	novelGene_8111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	140129785	140126253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_140126300_140129800
Isoform_137291_5	chr4	-	3263	1	Intergenic	novelGene_8112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTTGGTTATGGTGT	NA	False	NA	NA	False	NA	NA	NA	140129795	140126532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_140126500_140129800
Isoform_137292_44	chr4	-	174	1	Intergenic	novelGene_8113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTAACCAATA	NA	False	NA	NA	False	NA	NA	NA	140132060	140131886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_140131900_140132100
Isoform_137295_9	chr4	+	177	1	Intergenic	novelGene_8114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTTAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	140419028	140419205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_140419000_140419200
Isoform_137296_3	chr4	-	229	1	Intergenic	novelGene_8115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAGAAACAAAAACCTG	NA	False	NA	NA	False	NA	NA	NA	140422223	140421994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_140422000_140422200
Isoform_137299_8	chr4	-	200	1	Intergenic	novelGene_8116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAGGGACAACTGCTTA	NA	False	NA	NA	False	AAGAAA	-5	NA	140444876	140444676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_140444700_140444900
Isoform_137320_25	chr4	+	173	1	Intergenic	novelGene_8117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGCTACATAC	NA	False	NA	NA	False	NA	NA	NA	140465945	140466118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_140465900_140466100
Isoform_137321_9	chr4	+	175	1	Intergenic	novelGene_8118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140564447	140564622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_140564400_140564600
Isoform_137322_4	chr4	-	284	1	Intergenic	novelGene_8119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTCCACATAACCTTAT	9244	False	NA	NA	False	NA	NA	NA	140601342	140601058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_140601100_140601300
Isoform_137324_60	chr4	+	177	1	Intergenic	novelGene_8120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	140620445	140620622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_140620400_140620600
Isoform_137328_8	chr4	+	199	1	Intergenic	novelGene_8121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCGGAGGCATGATTGC	NA	False	NA	NA	False	NA	NA	NA	140681938	140682137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_140681900_140682100
Isoform_137330_6	chr4	-	190	1	Intergenic	novelGene_7459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGGCTGTAGGCAGGCC	NA	False	NA	NA	False	NA	NA	NA	32606384	32606194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_32606200_32606400
Isoform_137335_32	chr4	+	177	1	Intergenic	novelGene_8122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGGAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	140854034	140854211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_140854000_140854200
Isoform_137337_3	chr4	+	178	1	Intergenic	novelGene_8123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAAACG	NA	False	NA	NA	False	NA	NA	NA	140860994	140861172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_140861000_140861200
Isoform_137340_23	chr4	+	2472	1	NIC	ENSMUSG00000028282.13	novel	300	5	NA	NA	6	-13855	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	32615483	32617955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_32615500_32618000
Isoform_137351_5	chr4	-	186	1	Intergenic	novelGene_8124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGGTAGCAATCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	140964022	140963836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_140963800_140964000
Isoform_137355_165	chr4	-	181	1	Intergenic	novelGene_8125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	4897	False	NA	NA	False	NA	NA	NA	141073423	141073242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141073200_141073400
Isoform_137356_24	chr4	-	176	1	Intergenic	novelGene_8126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATATTTTAAACAA	4963	False	NA	NA	False	NA	NA	NA	141083256	141083080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141083100_141083300
Isoform_137357_26	chr4	+	183	1	Intergenic	novelGene_8127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGGTTTTTTTTTTTT	5930	False	NA	NA	False	NA	NA	NA	141113032	141113215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_141113000_141113200
Isoform_137358_25	chr4	-	241	1	Intergenic	novelGene_8128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACACGTACAAATTTGC	NA	False	NA	NA	False	NA	NA	NA	141118257	141118016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141118000_141118300
Isoform_137359_57	chr4	-	198	1	Intergenic	novelGene_8129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACATACATACATACATA	NA	False	NA	NA	False	NA	NA	NA	141145707	141145509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141145500_141145700
Isoform_13736_239	chr11	-	6341	28	FSM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	29	3	20	0	multi-exon	FALSE	canonical	3	373	junction_27	41.3360546031052	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	-14	True	NA	NA	NA	68899257	68876525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
Isoform_137361_18	chr4	-	173	1	Intergenic	novelGene_8130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAATAGCGGCT	NA	False	NA	NA	False	NA	NA	NA	141184417	141184244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141184200_141184400
Isoform_137363_4	chr4	+	165	1	Intergenic	novelGene_7460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTCATATTTGAATA	NA	False	NA	NA	False	NA	NA	NA	32651127	32651292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_32651100_32651300
Isoform_137364_5	chr4	+	2028	1	Intergenic	novelGene_8131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGGCTGGCGAGATGGC	7524	False	NA	NA	False	NA	NA	NA	141230245	141232273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_141230200_141232300
Isoform_137366_18	chr4	+	279	1	Intergenic	novelGene_8132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	774	False	NA	NA	False	NA	NA	NA	141283700	141283979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_141283700_141284000
Isoform_137370_29	chr4	+	354	1	Intergenic	novelGene_8133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTCGAAAATCCAAAAAA	4104	False	NA	4	True	NA	NA	NA	141288915	141289269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_141288900_141289300
Isoform_137372_8	chr4	+	172	1	Intergenic	novelGene_8134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAAAAAAGATCCTG	7450	False	NA	NA	False	NA	NA	NA	141292261	141292433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_141292300_141292400
Isoform_137373_3	chr4	+	2506	1	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	3	-4543	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAT	-15	True	NA	NA	False	GATAAA	-23	NA	32657121	32659627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_32657100_32659600
Isoform_137384_3	chr4	+	177	1	Intergenic	novelGene_8135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTGGAGTGAGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	141320842	141321019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_141320800_141321000
Isoform_137385_33	chr4	+	176	1	Intergenic	novelGene_8136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGTGTTAACTCAG	NA	False	NA	NA	False	NA	NA	NA	141339630	141339806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_141339600_141339800
Isoform_137387_4	chr4	-	167	1	Intergenic	novelGene_8137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTTTTTTAAATTTAA	9172	False	NA	NA	False	NA	NA	NA	141389568	141389401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141389400_141389600
Isoform_137388_32	chr4	-	170	1	Intergenic	novelGene_8138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAAGTCTTAGA	NA	False	NA	NA	False	NA	NA	NA	141402043	141401873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141401900_141402000
Isoform_137393_7	chr4	-	175	1	Intergenic	novelGene_8140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTAATTGAACAAGG	NA	False	NA	NA	False	NA	NA	NA	141520254	141520079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141520100_141520300
Isoform_137396_5	chr4	-	1977	1	Antisense	novelGene_ENSMUSG00000058006.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32735091	32733114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_32733100_32735100
Isoform_137397_15	chr4	+	172	1	Intergenic	novelGene_8141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141687850	141688022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_141687800_141688000
Isoform_137399_3	chr4	+	3020	3	Antisense	novelGene_ENSMUSG00000040616.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATGTCCCAGACTCAGG	2769	False	NA	NA	False	NA	NA	NA	141760140	141763218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_141760205_141760232_141761865_141761894
Isoform_137402_9	chr4	+	180	1	Intergenic	novelGene_8142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	141855444	141855624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_141855400_141855600
Isoform_137406_3	chr4	-	389	1	Intergenic	novelGene_7396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	5693955	5693566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_5693600_5694000
Isoform_137408_4	chr4	-	171	1	Intergenic	novelGene_8143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	141989697	141989526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_141989500_141989700
Isoform_137409_9	chr4	-	154	1	Intergenic	novelGene_8144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATAAAAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	142383131	142382977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_142383000_142383100
Isoform_137411_7	chr4	+	3269	1	Intergenic	novelGene_8145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AAGAAA	-11	NA	142902159	142905428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_142902200_142905400
Isoform_137413_3	chr4	+	172	1	Intergenic	novelGene_8146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	142943128	142943300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_142943100_142943300
Isoform_137414_13	chr4	-	163	1	Intergenic	novelGene_8147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTCAAAGAAAAACTTAAG	NA	False	NA	NA	False	NA	NA	NA	142962093	142961930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_142961900_142962100
Isoform_137415_7	chr4	-	179	1	Intergenic	novelGene_8148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATTAATAAACCA	NA	False	NA	NA	False	NA	NA	NA	142974471	142974292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_142974300_142974500
Isoform_137419_7	chr4	+	172	1	Intergenic	novelGene_8150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGATCTCTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	143055171	143055343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_143055200_143055300
Isoform_137423_4	chr7	+	176	1	Intergenic	novelGene_10364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126682669	126682845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126682700_126682800
Isoform_137426_15	chr4	+	174	1	Intergenic	novelGene_7462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAAAAAAAAAAATCTGT	NA	False	NA	NA	False	NA	NA	NA	32778545	32778719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_32778500_32778700
Isoform_137429_4	chr4	-	2379	1	Intergenic	novelGene_8151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	143712956	143710577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_143710600_143713000
Isoform_137430_20	chr4	-	4480	2	Intergenic	novelGene_8152	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTGGTCTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	143715105	143710578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_143710653_143710699
Isoform_137434_3	chr4	-	2703	1	Intergenic	novelGene_8153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	143713282	143710579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_143710600_143713300
Isoform_137438_62	chr4	+	174	1	Intergenic	novelGene_8154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAGAAAAG	8979	False	NA	NA	False	NA	NA	NA	143728429	143728603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_143728400_143728600
Isoform_137440_17	chr4	-	176	1	Intergenic	novelGene_8155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	143882161	143881985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_143882000_143882200
Isoform_137441_3	chr4	+	190	1	Intergenic	novelGene_8156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-19	NA	143975148	143975338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_143975100_143975300
Isoform_137442_41	chr4	+	176	1	Intergenic	novelGene_8157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTATAAGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	144042178	144042354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_144042200_144042400
Isoform_137443_7	chr4	-	176	1	Intergenic	novelGene_8158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	144049179	144049003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_144049000_144049200
Isoform_137448_3	chr4	-	1587	1	NIC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	21	-11801	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	144135013	144133426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_144133400_144135000
Isoform_137451_3	chr4	+	1197	1	FSM	ENSMUSG00000070610.5	ENSMUST00000118978.2	1389	1	532	-340	532	340	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAACAGGCCAATTGG	NA	False	NA	NA	False	AATAAA	-44	NA	144314345	144315542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_144314300_144315500
Isoform_137452_3	chr4	-	1753	1	Genic_Genomic	ENSMUSG00000020220.17	novel	NA	NA	NA	NA	-1181	-4645	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACTAAGCA	609	False	NA	NA	False	NA	NA	NA	144785949	144784196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_144784200_144785900
Isoform_137453_5	chr4	-	3333	2	Genic_Genomic	ENSMUSG00000028599.11	novel	3818	10	NA	NA	1	-18087	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAACAAAAAAACTGA	7833	False	NA	NA	False	NA	NA	NA	144973439	144970072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_144971595_144971628
Isoform_137455_7	chr4	-	175	1	Intergenic	novelGene_8159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	145002215	145002040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_145002000_145002200
Isoform_137456_10	chr4	+	177	1	Intergenic	novelGene_8160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAATGACTCTTTA	NA	False	NA	NA	False	NA	NA	NA	145078038	145078215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_145078000_145078200
Isoform_137458_7	chr4	-	902	1	Intergenic	novelGene_8161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAAAAAAAAAGCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	145165551	145164649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_145164600_145165600
Isoform_137460_3	chr4	+	175	1	Intergenic	novelGene_7463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	32798497	32798672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_32798500_32798700
Isoform_137461_22	chr4	-	4251	1	Antisense	novelGene_ENSMUSG00000085101.8_AS_novelGene_ENSMUSG00000082082.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAACGGGTGGG	NA	False	NA	NA	False	NA	NA	NA	145180284	145176033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_145176000_145180300
Isoform_137462_5	chr4	+	1886	2	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	3001	774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTTGCTTTGGTTGTTT	NA	False	NA	18	True	NA	NA	NA	145176310	145178232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_145177127_145177162
Isoform_137464_5	chr4	+	1868	2	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	2971	773	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGCTTTGGTTGTT	NA	False	NA	17	True	NA	NA	NA	145176280	145178231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_145176412_145176494
Isoform_13747_147	chr11	-	3886	19	FSM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	-33	8	-33	-8	multi-exon	FALSE	canonical	3	88	junction_15	16.162847964421	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTTTAATGTTTAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	69214634	69190320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
Isoform_137471_4	chr4	+	4969	1	FSM	ENSMUSG00000052912.8	ENSMUST00000121843.2	3123	1	-227	-1619	-133	1619	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGTGAAAATTCTCT	NA	False	NA	NA	False	NA	NA	NA	145190640	145195609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_145190600_145195600
Isoform_137472_6	chr4	+	1066	1	NIC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	-7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATACAAAAAAAGAAAAAAG	905	False	NA	NA	False	NA	NA	NA	145237339	145238405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_145237300_145238400
Isoform_13748_47	chr11	-	3979	19	FSM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	-124	6	-124	-6	multi-exon	TRUE	canonical	3	88	junction_15	16.162847964421	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTTAATGTTTAAGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	69214725	69190318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
Isoform_137498_94	chr4	-	174	1	Intergenic	novelGene_8162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145323072	145322898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_145322900_145323100
Isoform_137499_8	chr4	+	176	1	Intergenic	novelGene_8163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATAGTGGAAC	NA	False	NA	NA	False	NA	NA	NA	145369547	145369723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_145369500_145369700
Isoform_137500_12	chr4	+	857	1	NIC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	1	-31098	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATACAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	145397255	145398112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_145397300_145398100
Isoform_137501_4	chr4	+	3122	1	Intergenic	novelGene_8164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATCAAATAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	145401078	145404200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_145401100_145404200
Isoform_13751_3	chr11	-	3800	18	FSM	ENSMUSG00000032782.20	ENSMUST00000123176.8	3776	18	-34	10	-34	-10	multi-exon	FALSE	canonical	1	2	junction_17	30.4995320175113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAATGTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69214635	69190322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69213515
Isoform_137511_5	chr4	+	176	1	Intergenic	novelGene_8191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAACTGTTAGGTAAA	NA	False	NA	NA	False	NA	NA	NA	146674490	146674666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146674500_146674700
Isoform_137512_5	chr4	-	173	1	Intergenic	novelGene_8192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146679223	146679050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146679000_146679200
Isoform_137513_4	chr4	-	190	1	Intergenic	novelGene_8168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGCAAAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	145519082	145518892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_145518900_145519100
Isoform_137517_3	chr4	+	3054	1	Intergenic	novelGene_8169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACTTATCCTGATTTT	NA	False	NA	14	True	ATTAAA	-16	NA	145986550	145989604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_145986600_145989600
Isoform_137519_6	chr4	+	2989	1	Intergenic	novelGene_8170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTATCCTGATTTTTTTA	NA	False	NA	18	True	ATTAAA	-20	NA	145986619	145989608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_145986600_145989600
Isoform_137523_3	chr4	+	1107	1	Intergenic	novelGene_8171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGATAATTGTAATGC	NA	False	NA	2	True	AATAAA	-4	NA	145991372	145992479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_145991400_145992500
Isoform_137525_3	chr4	+	3832	1	FSM	ENSMUSG00000082195.4	ENSMUST00000121342.2	3177	1	-426	-229	-426	229	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGAGAAGTTTAATCA	NA	False	NA	NA	False	AATAAA	-25	NA	146003895	146007727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_146003900_146007700
Isoform_137533_6	chr4	-	196	1	Intergenic	novelGene_8172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTATTTACACTAACACAA	NA	False	NA	NA	False	NA	NA	NA	146029565	146029369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146029400_146029600
Isoform_137534_9	chr4	+	177	1	Intergenic	novelGene_7464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	32849448	32849625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_32849400_32849600
Isoform_13754_7	chr11	-	1488	2	ISM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	-52	22097	-52	-6392	5prime_fragment	FALSE	canonical	3	93	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	69214653	69212409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69212760_69213515
Isoform_137542_3	chr4	-	175	1	Intergenic	novelGene_8218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGCCTGCATA	1435	False	NA	NA	False	NA	NA	NA	147737370	147737195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147737200_147737400
Isoform_137543_9	chr4	-	174	1	Intergenic	novelGene_8173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	146111542	146111368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146111400_146111500
Isoform_137544_9	chr4	+	3606	2	Intergenic	novelGene_8194	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGACTTGGCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	146802314	146806004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146803919_146804002
Isoform_13755_3	chr11	-	7296	40	NIC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_39	13.6765971522413	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69260239	69234098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237397_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69259961
Isoform_137550_6	chr4	+	1222	1	Genic_Genomic	ENSMUSG00000084127.2	novel	NA	NA	NA	NA	-544	-1002	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	146175979	146177201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_146176000_146177200
Isoform_137553_28	chr4	+	157	1	Intergenic	novelGene_8165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	145472803	145472960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_145472800_145473000
Isoform_137555_7	chr4	-	174	1	Intergenic	novelGene_8166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	145491830	145491656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_145491700_145491800
Isoform_137556_10	chr4	-	185	1	Intergenic	novelGene_7465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATGGGCTATGG	6196	False	NA	NA	False	NA	NA	NA	32858412	32858227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_32858200_32858400
Isoform_137557_16	chr4	-	2312	1	Antisense	novelGene_ENSMUSG00000085525.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGGAAAAAAAAAAAAAAA	8124	False	NA	NA	False	AATGAA	-31	NA	146216690	146214378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_146214400_146216700
Isoform_137558_3	chr4	-	188	1	Intergenic	novelGene_8193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTGCAAAGCTTC	NA	False	NA	NA	False	NA	NA	NA	146706647	146706459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146706500_146706600
Isoform_137559_13	chr4	-	1878	1	Intergenic	novelGene_8175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	882	False	NA	NA	False	NA	NA	NA	146223932	146222054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146222100_146223900
Isoform_13756_4	chr11	-	7201	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4281	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_35	13.3261815138831	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264513	69234098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237397_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
Isoform_137563_21	chr4	+	848	1	Intergenic	novelGene_8182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATACAAAAGAAAAGAAAAG	2312	False	NA	NA	False	NA	NA	NA	146289370	146290218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146289400_146290200
Isoform_137565_6	chr4	+	1320	1	Intergenic	novelGene_8183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACAAGTTTGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	146318400	146319720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146318400_146319700
Isoform_137566_3	chr4	-	169	1	Intergenic	novelGene_7466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATCTTTAAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	32901096	32900927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_32900900_32901100
Isoform_137568_36	chr4	-	188	1	Intergenic	novelGene_8185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATCCTTTTTTTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	146388400	146388212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146388200_146388400
Isoform_13757_4	chr11	-	1909	6	ISM	ENSMUSG00000018474.19	ENSMUST00000122992.2	2153	7	775	0	-701	0	3prime_fragment	FALSE	canonical	3	33	junction_3	10.807404868885	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69238661	69234098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578
Isoform_137572_9	chr4	+	7859	1	Intergenic	novelGene_8187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146500250	146508109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146500200_146508100
Isoform_137577_58	chr4	-	176	1	Intergenic	novelGene_8189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAGAAAAATATT	NA	False	NA	NA	False	NA	NA	NA	146571836	146571660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146571700_146571800
Isoform_137578_4	chr4	-	6102	1	Intergenic	novelGene_8190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCATTCTAAACATGGA	NA	False	NA	NA	False	NA	NA	NA	146610625	146604523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146604500_146610600
Isoform_137579_4	chr4	-	308	1	Intergenic	novelGene_7467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAAAAAAAGGCACAC	NA	False	NA	NA	False	NA	NA	NA	32925974	32925666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_32925700_32926000
Isoform_13758_3	chr11	-	3162	16	ISM	ENSMUSG00000018474.19	ENSMUST00000108661.8	7261	40	16716	0	1777	0	3prime_fragment	FALSE	canonical	3	33	junction_3	9.23760430703401	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69243516	69234098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372
Isoform_137581_3	chr4	+	1236	1	ISM	ENSMUSG00000056300.15	ENSMUST00000179175.3	2953	4	23239	1	23239	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	146622615	146623851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_146622600_146623900
Isoform_137583_4	chr4	+	2251	2	NNC	ENSMUSG00000083038.2	novel	1443	2	NA	NA	-573	17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGGTAGTTTTGTACAC	NA	False	NA	NA	False	AATAAA	-17	NA	146664512	146666786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_146665747_146665769
Isoform_137584_36	chr2	+	157	1	Intergenic	novelGene_6031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	3671	False	NA	NA	False	NA	NA	NA	25229094	25229251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_25229100_25229300
Isoform_137586_5	chr4	-	173	1	Intergenic	novelGene_8174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146190729	146190556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146190600_146190700
Isoform_13759_3	chr11	-	7178	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4304	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_35	12.905207425618	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264536	69234098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
Isoform_137617_16	chr4	-	178	1	Intergenic	novelGene_8195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146825644	146825466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146825500_146825600
Isoform_137619_53	chr4	-	832	1	NIC	ENSMUSG00000045699.5	novel	750	5	NA	NA	17	-16336	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATACAAAGAAAGGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	146994030	146993198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_146993200_146994000
Isoform_137620_9	chr4	-	169	1	Intergenic	novelGene_8197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAAAAAGAATGCA	NA	False	NA	NA	False	NA	NA	NA	147009254	147009085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147009100_147009300
Isoform_137622_8	chr4	+	550	1	Intergenic	novelGene_8198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	1288	False	NA	10	True	AATAAA	-18	NA	147014474	147015024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147014500_147015000
Isoform_137623_30	chr4	+	849	1	Genic_Genomic	ENSMUSG00000086147.3	novel	NA	NA	NA	NA	-13	-1329	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATACAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	147056419	147057268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_147056400_147057300
Isoform_137625_66	chr4	-	177	1	Intergenic	novelGene_8196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATTAAAAAAATAAA	8934	False	NA	NA	False	NA	NA	NA	146896029	146895852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_146895900_146896000
Isoform_137626_5	chr4	+	3271	1	ISM	ENSMUSG00000067919.9	ENSMUST00000075775.6	3993	5	35673	1	35645	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	9739	False	NA	NA	False	AATAAA	-18	NA	147141979	147145250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_147142000_147145200
Isoform_13763_16	chr11	-	3772	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-350	-2669	-52	982	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATCTGCAATAACTAG	NA	False	NA	-14	True	NA	NA	NA	69286509	69281768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
Isoform_137631_5	chr4	+	381	1	Genic_Genomic	ENSMUSG00000067919.9	novel	NA	NA	NA	NA	38538	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	147144872	147145253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_147144900_147145300
Isoform_137635_9	chr4	-	166	1	Intergenic	novelGene_8200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	147227543	147227377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147227400_147227500
Isoform_137636_3	chr4	+	1541	1	Genic_Genomic	ENSMUSG00000067916.10	novel	NA	NA	NA	NA	29725	1180	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTCCATCCGCTAC	NA	False	NA	NA	False	NA	NA	NA	147264675	147266216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_147264700_147266200
Isoform_137637_3	chr4	+	1128	1	Intergenic	novelGene_8201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTATGTCCATCCGCT	NA	False	NA	NA	False	NA	NA	NA	147265086	147266214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147265100_147266200
Isoform_137641_45	chr4	-	176	1	Intergenic	novelGene_8202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAGAAAAATATTC	NA	False	NA	NA	False	NA	NA	NA	147298263	147298087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147298100_147298300
Isoform_137643_9	chr4	+	848	1	Genic_Genomic	ENSMUSG00000087207.9	novel	NA	NA	NA	NA	-3	-27500	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATACAAAAGAAAAGAAAAG	4107	False	NA	NA	False	NA	NA	NA	147314737	147315585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_147314700_147315600
Isoform_137644_3	chr4	+	462	1	Intergenic	novelGene_8203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGACAAAATAAAAACAA	7448	False	NA	NA	False	NA	NA	NA	147318078	147318540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147318100_147318500
Isoform_137645_33	chr4	-	177	1	Intergenic	novelGene_8204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147319213	147319036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147319000_147319200
Isoform_137648_9	chr4	-	183	1	Intergenic	novelGene_8205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGACTGTTTTTCTATT	NA	False	NA	NA	False	NA	NA	NA	147385717	147385534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147385500_147385700
Isoform_137652_4	chr4	+	2095	1	Intergenic	novelGene_8186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGGTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	146391464	146393559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_146391500_146393600
Isoform_13766_42	chr11	-	3504	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-83	-2668	-83	981	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCATCTGCAATAACTA	NA	False	NA	-15	True	NA	NA	NA	69286242	69281769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
Isoform_137660_3	chr4	+	895	3	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	587	182325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACAAGGTTGCTTTGGT	NA	False	NA	3	True	NA	NA	NA	147417450	147600516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_147418184_147600139_147600265_147600479
Isoform_137661_4	chr4	+	865	3	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	623	182328	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147417486	147600519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr4_+_147418191_147600143_147600265_147600479
Isoform_13768_22	chr11	-	3554	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-119	-2682	-119	995	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAGTGGGTCTGATGTG	NA	False	NA	-1	True	NA	NA	NA	69286278	69281755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
Isoform_137684_4	chr4	+	1819	1	Intergenic	novelGene_8206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	147475800	147477619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147475800_147477600
Isoform_137685_5	chr4	+	1651	1	Intergenic	novelGene_8207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	147475968	147477619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147476000_147477600
Isoform_137687_5	chr4	+	1415	1	Intergenic	novelGene_8208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	147476195	147477610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147476200_147477600
Isoform_13769_8	chr11	-	3793	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-373	-2667	-75	980	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCATCTGCAATAACT	NA	False	NA	-16	True	NA	NA	NA	69286532	69281770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
Isoform_137694_5	chr4	+	512	1	Intergenic	novelGene_8209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	147477106	147477618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147477100_147477600
Isoform_137700_4	chr4	+	7842	1	Intergenic	novelGene_8211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	147533634	147541476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147533600_147541500
Isoform_137703_3	chr4	-	5746	1	Intergenic	novelGene_8212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	147550275	147544529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147544500_147550300
Isoform_137704_5	chr4	+	208	1	Intergenic	novelGene_7468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAAACCCTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	33005762	33005970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_33005800_33006000
Isoform_137705_5	chr4	-	1711	1	Intergenic	novelGene_8213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	147567360	147565649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147565600_147567400
Isoform_137706_4	chr4	-	204	1	Intergenic	novelGene_8214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAGCATCATAGATACT	NA	False	NA	NA	False	NA	NA	NA	147592567	147592363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147592400_147592600
Isoform_137708_5	chr4	+	1191	2	Intergenic	novelGene_8215	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTTGGTTGTTTTCA	NA	False	NA	11	True	NA	NA	NA	147599312	147600524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147599897_147599917
Isoform_13771_21	chr11	-	855	2	FSM	ENSMUSG00000045377.6	ENSMUST00000050140.6	1582	2	0	727	0	-727	multi-exon	FALSE	canonical	3	22	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAAAATGAATGCACTC	NA	False	NA	NA	False	AATAAA	-6	NA	69289060	69288071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69288708_69288841
Isoform_137710_20	chr4	+	495	1	Intergenic	novelGene_8216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGCTTTGGTTGTTTTC	NA	False	NA	10	True	NA	NA	NA	147600028	147600523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147600000_147600500
Isoform_137713_82	chr4	-	174	1	Intergenic	novelGene_7469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTTCATAGT	NA	False	NA	NA	False	NA	NA	NA	33006220	33006046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_33006000_33006200
Isoform_137714_8	chr4	-	175	1	Intergenic	novelGene_8217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGTGAATTTAAG	NA	False	NA	NA	False	NA	NA	NA	147624764	147624589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147624600_147624800
Isoform_137715_11	chr4	+	900	1	Genic_Genomic	ENSMUSG00000065999.14	novel	NA	NA	NA	NA	-16	-28781	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	147637717	147638617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_147637700_147638600
Isoform_137722_19	chr4	-	3037	1	Antisense	novelGene_ENSMUSG00000065999.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	147671930	147668893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_147668900_147671900
Isoform_13773_11	chr11	-	2648	13	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	8700	1132	-760	-1132	3prime_fragment	FALSE	canonical	3	11	junction_5	5.70270403697521	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	69295801	69290465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831
Isoform_13774_7	chr11	-	2708	13	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	8640	1132	-820	-1132	3prime_fragment	FALSE	canonical	3	11	junction_5	5.70270403697521	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	69295861	69290465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831
Isoform_137740_53	chr4	-	177	1	Intergenic	novelGene_8219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATTAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	147741749	147741572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_147741600_147741700
Isoform_137741_3	chr4	+	183	1	Intergenic	novelGene_8199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATGCTGACCGT	NA	False	NA	NA	False	NA	NA	NA	147076580	147076763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147076600_147076800
Isoform_137742_11	chr4	-	1063	1	Genic_Genomic	ENSMUSG00000062518.8	novel	NA	NA	NA	NA	-46	-28035	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATACAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	147787056	147785993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_147786000_147787100
Isoform_137743_17	chr4	+	197	1	Intergenic	novelGene_8220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTATTTACACTAACACAA	NA	False	NA	NA	False	NA	NA	NA	147791369	147791566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147791400_147791600
Isoform_137744_4	chr4	-	3886	1	FSM	ENSMUSG00000081179.2	ENSMUST00000121031.2	2950	1	-552	-384	-552	384	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATACGTTGTTAGAG	NA	False	NA	NA	False	GATAAA	-10	NA	147823435	147819549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_147819500_147823400
Isoform_137752_20	chr4	-	175	1	Intergenic	novelGene_7470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	33011624	33011449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_33011400_33011600
Isoform_137755_4	chr4	-	1641	1	ISM	ENSMUSG00000078495.11	ENSMUST00000105734.10	2729	6	54169	5	20214	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	8315	False	NA	NA	False	NA	NA	NA	147840076	147838435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_147838400_147840100
Isoform_137756_3	chr4	-	2070	1	ISM	ENSMUSG00000078495.11	ENSMUST00000105734.10	2729	6	53743	2	19788	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	7889	False	NA	NA	False	NA	NA	NA	147840502	147838432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_147838400_147840500
Isoform_137759_3	chr4	-	1811	1	ISM	ENSMUSG00000078495.11	ENSMUST00000105734.10	2729	6	53999	5	20044	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	8145	False	NA	NA	False	NA	NA	NA	147840246	147838435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_-_147838400_147840200
Isoform_137760_5	chr4	+	3902	1	Antisense	novelGene_ENSMUSG00000078495.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAACCAGCTTATAAGTG	NA	False	NA	NA	False	NA	NA	NA	147858910	147862812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_147858900_147862800
Isoform_137765_3	chr4	+	294	1	Intergenic	novelGene_8221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTTAAAAAA	NA	False	NA	NA	False	CATAAA	-3	NA	147916146	147916440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_147916100_147916400
Isoform_13777_3	chr11	-	2818	6	NIC	ENSMUSG00000005237.15	novel	13704	86	NA	NA	-12145	-7728	intron_retention	FALSE	canonical	1	1	junction_5	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATATGTCCTTTTTTA	1501	False	NA	NA	False	ATTAAA	-8	NA	69368665	69363163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69364304_69364545_69364699_69365025_69365154_69366291_69366473_69367153_69368175_69368470
Isoform_137771_29	chr4	-	162	1	Intergenic	novelGene_8222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	148110388	148110226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_148110200_148110400
Isoform_137772_10	chr4	-	172	1	Intergenic	novelGene_8223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTTTTATCACCA	NA	False	NA	NA	False	NA	NA	NA	148114924	148114752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_148114800_148114900
Isoform_137773_4	chr4	+	163	1	Intergenic	novelGene_8224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAAAAATAAGAGGTTGG	NA	False	NA	NA	False	NA	NA	NA	148121736	148121899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_148121700_148121900
Isoform_137778_28	chr4	-	3101	1	NIC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	30	-986	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148172458	148169357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_148169400_148172500
Isoform_13778_4	chr11	-	2722	14	NNC	ENSMUSG00000005237.15	novel	2616	14	NA	NA	-2018	1742	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	2.02353022122552	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTATCGCTTCTTAAATT	NA	False	NA	NA	False	NA	NA	NA	69437400	69405065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_69405717_69406446_69406630_69406807_69406938_69407300_69407507_69407842_69407931_69408396_69408555_69409101_69409294_69411537_69411777_69411915_69412027_69414999_69415229_69420208_69420380_69423194_69423254_69435202_69435383_69437275
Isoform_137780_10	chr4	+	167	1	Intergenic	novelGene_8225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	148187945	148188112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_148187900_148188100
Isoform_137781_4	chr4	-	151	1	Intergenic	novelGene_8226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	148196444	148196293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_148196300_148196400
Isoform_137782_7	chr4	-	309	1	Intergenic	novelGene_8227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGTTAAAATCAGAAAT	NA	False	NA	NA	False	AATAAA	-30	NA	148200943	148200634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_148200600_148200900
Isoform_137785_10	chr4	+	171	1	Intergenic	novelGene_8228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	148273603	148273774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_148273600_148273800
Isoform_137786_31	chr4	-	180	1	Intergenic	novelGene_7471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATAGCCAGA	1931	False	NA	NA	False	NA	NA	NA	33170081	33169901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_33169900_33170100
Isoform_137788_56	chr4	+	174	1	Intergenic	novelGene_8229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCTGA	NA	False	NA	NA	False	NA	NA	NA	148511294	148511468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_148511300_148511500
Isoform_137790_10	chr4	-	179	1	Intergenic	novelGene_8230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	148574769	148574590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_148574600_148574800
Isoform_137791_4	chr4	+	175	1	Intergenic	novelGene_8231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATCCAGGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	148583105	148583280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_148583100_148583300
Isoform_137795_207	chr4	-	173	1	Intergenic	novelGene_8233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	148675027	148674854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_148674900_148675000
Isoform_137797_4	chr4	+	10999	1	Genic_Genomic	ENSMUSG00000028979.18	novel	NA	NA	NA	NA	8165	6239	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGG	NA	False	NA	NA	False	NA	NA	NA	148695196	148706195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_148695200_148706200
Isoform_13780_13	chr11	-	3202	5	FSM	ENSMUSG00000003934.6	ENSMUST00000004036.6	3183	5	-32	13	-32	-13	multi-exon	FALSE	canonical	3	7	junction_4	2.17944947177034	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAGTTGACCAGAAG	NA	False	NA	-12	True	NA	NA	NA	69451063	69444930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69447096_69447518_69447624_69447731_69447825_69448025_69448319_69450517
Isoform_137809_11	chr4	+	1205	1	Antisense	novelGene_ENSMUSG00000041459.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTTTTTTCTAAAGAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	148701327	148702532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_148701300_148702500
Isoform_13782_9	chr11	-	985	6	ISM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	15640	-2	238	1	3prime_fragment	FALSE	canonical	3	116	junction_5	25.3092868330975	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCATTGTGTCTGTTCG	NA	False	NA	-2	True	TATAAA	-17	NA	69454510	69452582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372
Isoform_137826_4	chr4	+	182	1	Intergenic	novelGene_8234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGGAGAAAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	148716401	148716583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_148716400_148716600
Isoform_137827_4	chr4	+	166	1	Intergenic	novelGene_8235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATCTTTAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	148731796	148731962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_148731800_148732000
Isoform_137829_18	chr4	-	189	1	Intergenic	novelGene_8236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	148953390	148953201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_148953200_148953400
Isoform_13783_201	chr11	-	1901	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	-12	2	-12	-2	multi-exon	FALSE	canonical	3	103	junction_6	29.7960143162773	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGAGTCATTGTGTCTG	NA	False	NA	-6	True	TATAAA	-13	NA	69470162	69452586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
Isoform_137830_45	chr4	-	176	1	Antisense	novelGene_ENSMUSG00000086740.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGGTGGGTTCT	NA	False	NA	NA	False	NA	NA	NA	149067678	149067502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_149067500_149067700
Isoform_137831_15	chr6	+	158	1	Intergenic	novelGene_9429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72768983	72769141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_72769000_72769100
Isoform_137832_3	chr4	-	274	1	Intergenic	novelGene_7472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTTTGTTCATTTAT	NA	False	NA	NA	False	AAAACA	-6	NA	33211721	33211447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_33211400_33211700
Isoform_137836_25	chr4	-	177	1	Intergenic	novelGene_8237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	149197422	149197245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_149197200_149197400
Isoform_137839_18	chr4	-	300	1	Intergenic	novelGene_8238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	149254506	149254206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_149254200_149254500
Isoform_13784_5	chr11	-	2860	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	-971	2	-40	-2	multi-exon	FALSE	canonical	3	103	junction_6	29.7960143162773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGAGTCATTGTGTCTG	NA	False	NA	-6	True	TATAAA	-13	NA	69471121	69452586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
Isoform_137846_3	chr4	+	151	1	Intergenic	novelGene_8240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149292035	149292186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_149292000_149292200
Isoform_137847_62	chr4	+	198	1	Intergenic	novelGene_8241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTACTGACTCATTCT	NA	False	NA	7	True	NA	NA	NA	149293243	149293441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_149293200_149293400
Isoform_137848_4	chr4	+	276	1	Intergenic	novelGene_7473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTAAAAATTTAAACC	5165	False	NA	NA	False	AATACA	-22	NA	33265731	33266007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_33265700_33266000
Isoform_137849_22	chr4	+	173	1	Intergenic	novelGene_8242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATACACACATTTG	NA	False	NA	NA	False	NA	NA	NA	149295967	149296140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_149296000_149296100
Isoform_137852_25	chr4	+	177	1	Intergenic	novelGene_8243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGAGAAACAGT	1808	False	NA	NA	False	NA	NA	NA	149336472	149336649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_149336500_149336600
Isoform_137856_19	chr4	+	235	1	Intergenic	novelGene_8245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGACAAAAGTTATCT	NA	False	NA	NA	False	AATAAA	-10	NA	149401221	149401456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_149401200_149401500
Isoform_137858_146	chr4	-	167	1	Intergenic	novelGene_8246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTTTTTTTGTTTGTTG	9508	False	NA	-12	True	NA	NA	NA	149417112	149416945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_149416900_149417100
Isoform_137859_5	chr4	+	176	1	Intergenic	novelGene_7474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAACATCAA	NA	False	NA	NA	False	NA	NA	NA	33285052	33285228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_33285100_33285200
Isoform_137863_87	chr4	+	587	1	FSM	ENSMUSG00000070572.8	ENSMUST00000117987.2	378	1	-20	-189	-20	189	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTAGCTACTTCCTAA	1894	False	NA	NA	False	ATTAAA	-35	NA	149541765	149542352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_149541800_149542400
Isoform_137865_21	chr4	+	172	1	Antisense	novelGene_ENSMUSG00000028992.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAACAACAACAAA	650	False	NA	NA	False	NA	NA	NA	149553841	149554013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_149553800_149554000
Isoform_137867_11	chr4	-	170	1	Intergenic	novelGene_8247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTATAGTATAGACTCA	NA	False	NA	NA	False	NA	NA	NA	149586815	149586645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_149586600_149586800
Isoform_137868_100	chr4	-	177	1	Intergenic	novelGene_8248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	149595086	149594909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_149594900_149595100
Isoform_137869_16	chr4	-	177	1	Intergenic	novelGene_8249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTTAAATGCAC	NA	False	NA	NA	False	NA	NA	NA	149598330	149598153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_149598200_149598300
Isoform_13787_5	chr11	-	1959	9	NIC	ENSMUSG00000041346.12	novel	1891	10	NA	NA	40	-2	intron_retention	FALSE	canonical	3	103	junction_5	30.2321745000256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGAGTCATTGTGTCTG	NA	False	NA	-6	True	TATAAA	-13	NA	69470110	69452586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
Isoform_137870_7	chr4	-	186	1	Intergenic	novelGene_8250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATAAAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	149628953	149628767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_149628800_149629000
Isoform_137871_6	chr4	+	1677	1	NIC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	15	-28899	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	5	True	NA	NA	False	NA	NA	NA	6191112	6192789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_6191100_6192800
Isoform_137873_59	chr4	-	2193	1	Antisense	novelGene_ENSMUSG00000039953.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149726392	149724199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_149724200_149726400
Isoform_137879_21	chr4	+	175	1	Intergenic	novelGene_8251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATAGATCTTAAATG	NA	False	NA	NA	False	NA	NA	NA	149791439	149791614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_149791400_149791600
Isoform_13788_6	chr11	-	1904	9	NIC	ENSMUSG00000041346.12	novel	1891	10	NA	NA	100	2	intron_retention	FALSE	canonical	3	103	junction_5	30.2321745000256	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCATTGTGTCTGTTCGG	NA	False	NA	-1	True	TATAAA	-18	NA	69470050	69452581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
Isoform_137883_25	chr4	-	178	1	Intergenic	novelGene_8252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGACACTCAT	NA	False	NA	NA	False	NA	NA	NA	149823834	149823656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_149823700_149823800
Isoform_137887_3	chr5	-	160	1	Intergenic	novelGene_8347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	20333057	20332897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_20332900_20333100
Isoform_137888_6	chr4	-	176	1	Intergenic	novelGene_8253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTTAACTTGGCA	NA	False	NA	NA	False	NA	NA	NA	149878257	149878081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_149878100_149878300
Isoform_137890_5	chr4	+	3428	3	Intergenic	novelGene_8254	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGCCAGATGT	3339	False	NA	NA	False	AGTAAA	-15	NA	150055970	150059444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_150057213_150057232_150059168_150059193
Isoform_137893_15	chr4	-	174	1	Intergenic	novelGene_8255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCTTTAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	150096175	150096001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_150096000_150096200
Isoform_137896_4	chr4	+	307	1	Intergenic	novelGene_8256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAAAATGAGTATCAG	7032	False	NA	-2	True	AATAAA	-11	NA	150155942	150156249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_150155900_150156200
Isoform_137898_9	chr4	-	171	1	Intergenic	novelGene_8257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAGAAAATATA	7972	False	NA	NA	False	NA	NA	NA	150193161	150192990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_150193000_150193200
Isoform_13790_4	chr11	-	1935	9	NIC	ENSMUSG00000041346.12	novel	1891	10	NA	NA	58	0	intron_retention	FALSE	canonical	3	103	junction_5	28.1236110768159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	False	NA	-4	True	TATAAA	-15	NA	69470092	69452584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
Isoform_137900_3	chr4	-	172	1	Intergenic	novelGene_8258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAGTGCACACT	8182	False	NA	NA	False	NA	NA	NA	150307357	150307185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_150307200_150307400
Isoform_137904_44	chr4	+	2679	1	NIC	ENSMUSG00000063524.14	novel	519	6	NA	NA	0	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	150321696	150324375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_150321700_150324400
Isoform_137906_3	chr4	-	3808	1	Antisense	novelGene_ENSMUSG00000063524.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTATCCCCCCACCCCA	NA	False	NA	NA	False	NA	NA	NA	150329156	150325348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_150325300_150329200
Isoform_137910_435	chr4	-	179	1	Intergenic	novelGene_8259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	435	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATATTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150338142	150337963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_150338000_150338100
Isoform_137912_3	chr4	-	170	1	Intergenic	novelGene_8260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150363911	150363741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_150363700_150363900
Isoform_137913_3	chr4	+	176	1	Intergenic	novelGene_8261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	150384364	150384540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_150384400_150384500
Isoform_137914_4	chr4	+	177	1	Intergenic	novelGene_8262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTGAATGACAA	NA	False	NA	NA	False	NA	NA	NA	150384702	150384879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_150384700_150384900
Isoform_137917_4	chr4	-	178	1	Intergenic	novelGene_8263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	150451869	150451691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_150451700_150451900
Isoform_137919_39	chr11	-	151	1	Intergenic	novelGene_1462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATATAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	41445985	41445834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_41445800_41446000
Isoform_137921_620	chr4	+	176	1	Intergenic	novelGene_8264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	620	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	5036	False	NA	NA	False	NA	NA	NA	150578551	150578727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_150578600_150578700
Isoform_137922_4	chr4	-	175	1	Intergenic	novelGene_8265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTAGGAC	NA	False	NA	NA	False	NA	NA	NA	150623197	150623022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_150623000_150623200
Isoform_137923_44	chr4	+	184	1	Intergenic	novelGene_8266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	5309	False	NA	NA	False	NA	NA	NA	150683448	150683632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_150683400_150683600
Isoform_13793_8	chr11	-	4679	6	FSM	ENSMUSG00000041329.14	ENSMUST00000144425.2	711	6	-2346	-1622	-17	0	multi-exon	FALSE	canonical	3	193	junction_2	3.13687742827162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGAGCCCTGTGTGTG	NA	False	NA	-7	True	AATAAA	-33	NA	69496785	69490561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250
Isoform_137931_13	chr4	-	162	1	Intergenic	novelGene_8267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAACCCAT	2484	False	NA	NA	False	NA	NA	NA	150797117	150796955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_150797000_150797100
Isoform_137932_19	chr4	+	167	1	Intergenic	novelGene_7475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGGAGACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	33524207	33524374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_33524200_33524400
Isoform_137938_4	chr4	+	435	1	Antisense	novelGene_ENSMUSG00000028957.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151088646	151089081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_151088600_151089100
Isoform_13794_390	chr11	-	2978	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	-130	-6	-17	6	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCTGTGTGTGCTTGTC	NA	False	NA	-1	True	AATAAA	-39	NA	69496785	69490555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
Isoform_137940_4	chr4	-	204	1	Intergenic	novelGene_8268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTAATTAAATGACAAAC	NA	False	NA	NA	False	NA	NA	NA	151416401	151416197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_151416200_151416400
Isoform_137941_17	chr4	-	210	1	Intergenic	novelGene_8269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGACATGCCAGACAC	81	False	NA	NA	False	NA	NA	NA	151861686	151861476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_151861500_151861700
Isoform_137942_5	chr4	+	1137	1	Intergenic	novelGene_8270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATGTTTTGTATTGT	NA	False	NA	NA	False	AATAAA	-9	NA	151946624	151947761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_151946600_151947800
Isoform_137944_22	chr6	+	157	1	Intergenic	novelGene_9344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	47756299	47756456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_47756300_47756500
Isoform_137947_13	chr4	+	179	1	Intergenic	novelGene_7476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGAGACTTCCCTGA	NA	False	NA	NA	False	NA	NA	NA	33624259	33624438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_33624300_33624400
Isoform_137948_18	chr4	-	1230	1	NIC	ENSMUSG00000039759.11	novel	1124	4	NA	NA	0	-2309	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-33	NA	152073454	152072224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_-_152072200_152073500
Isoform_137950_10	chr4	+	158	1	Intergenic	novelGene_8272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	8081	False	NA	NA	False	NA	NA	NA	152084341	152084499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_152084300_152084500
Isoform_137953_120	chr4	-	177	1	Intergenic	novelGene_8273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTAAAAGCTGGTC	6988	False	NA	NA	False	NA	NA	NA	152113809	152113632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_152113600_152113800
Isoform_137956_44	chr4	+	192	1	Intergenic	novelGene_7477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGCCTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	34179103	34179295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_34179100_34179300
Isoform_137963_13	chr4	+	165	1	Intergenic	novelGene_8275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	152150651	152150816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_152150700_152150800
Isoform_137965_6	chr4	+	175	1	Intergenic	novelGene_8276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	220	False	NA	NA	False	NA	NA	NA	152178468	152178643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_152178500_152178600
Isoform_137966_3	chr4	+	171	1	Intergenic	novelGene_8277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAAAAAAGAGATG	2888	False	NA	NA	False	NA	NA	NA	152227250	152227421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_152227200_152227400
Isoform_137968_6	chr4	-	196	1	Intergenic	novelGene_8278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGACTGTGAAATG	NA	False	NA	NA	False	NA	NA	NA	152239773	152239577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_152239600_152239800
Isoform_137969_5	chr4	+	910	1	FSM	ENSMUSG00000062554.8	ENSMUST00000122336.2	381	1	-66	-463	-66	463	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAATTGTGGGGAGCGG	NA	False	NA	NA	False	NA	NA	NA	34353976	34354886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_34354000_34354900
Isoform_137970_12	chr4	+	176	1	Intergenic	novelGene_8279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	152241188	152241364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_152241200_152241400
Isoform_137973_41	chr4	+	178	1	Intergenic	novelGene_8280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	152252179	152252357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_152252200_152252400
Isoform_137975_6	chr4	-	2285	1	Intergenic	novelGene_8281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8696	False	NA	NA	False	NA	NA	NA	152282971	152280686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_152280700_152283000
Isoform_137976_571	chr4	-	175	1	Intergenic	novelGene_8282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	571	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCATTC	NA	False	NA	NA	False	NA	NA	NA	152293090	152292915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_152292900_152293100
Isoform_137977_3	chr4	-	174	1	Intergenic	novelGene_8283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	152379708	152379534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_152379500_152379700
Isoform_137984_3	chr4	+	197	1	Intergenic	novelGene_7478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGCTCATCTGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	34364193	34364390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_34364200_34364400
Isoform_13799_19	chr11	-	3023	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	-173	-8	-60	8	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGCTTGTCTT	NA	False	NA	1	True	AATAAA	-41	NA	69496828	69490553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
Isoform_137995_24	chr4	+	174	1	Intergenic	novelGene_8287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAACTGTTGTCC	NA	False	NA	NA	False	NA	NA	NA	153175301	153175475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_153175300_153175500
Isoform_137999_6	chr4	-	180	1	Intergenic	novelGene_8288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATCTTTCATAC	NA	False	NA	NA	False	NA	NA	NA	154067787	154067607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_154067600_154067800
Isoform_138007_12	chr4	+	229	1	Intergenic	novelGene_8289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATAGGGCCAGAAAGCA	NA	False	NA	NA	False	GGGGCT	-31	NA	154280626	154280855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_154280600_154280900
Isoform_138010_9	chr4	-	176	1	Intergenic	novelGene_7479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	34530813	34530637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_34530600_34530800
Isoform_138011_3	chr4	-	2123	1	Genic_Genomic	ENSMUSG00000086810.2	novel	NA	NA	NA	NA	-302	-7744	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGGTTTCAGCCTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	154740077	154737954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_154738000_154740100
Isoform_138014_4	chr4	+	3342	1	NIC	ENSMUSG00000029056.14	novel	2508	19	NA	NA	4	-11686	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATTAAAAAATATATAAA	NA	False	NA	NA	False	NA	NA	NA	155048583	155051925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155048600_155051900
Isoform_138015_3	chr4	+	176	1	Intergenic	novelGene_8291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCTGGTGAGATGGGT	NA	False	NA	NA	False	NA	NA	NA	155149657	155149833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_155149700_155149800
Isoform_138016_93	chr4	+	176	1	Intergenic	novelGene_7480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	34547476	34547652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_34547500_34547700
Isoform_138019_3	chr4	-	2790	1	Antisense	novelGene_ENSMUSG00000029049.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGATGTATTTAGGGACA	NA	False	NA	NA	False	NA	NA	NA	155179160	155176370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_155176400_155179200
Isoform_138023_5	chr4	+	177	1	Intergenic	novelGene_8293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	155314458	155314635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_155314500_155314600
Isoform_138025_10	chr4	-	233	1	Intergenic	novelGene_8294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAAAGTCCCAGCAGCTC	4084	False	NA	NA	False	NA	NA	NA	155341663	155341430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155341400_155341700
Isoform_138026_5	chr4	-	154	1	Intergenic	novelGene_8295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAACTCTTTTTAA	3895	False	NA	NA	False	NA	NA	NA	155341852	155341698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155341700_155341900
Isoform_138031_5	chr4	+	175	1	Intergenic	novelGene_8297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGCCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	155447884	155448059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_155447900_155448100
Isoform_138032_13	chr4	+	160	1	Intergenic	novelGene_8298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAATGTATATATTA	NA	False	NA	NA	False	AATAAA	-6	NA	155448278	155448438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_155448300_155448400
Isoform_138035_10	chr4	-	281	1	Intergenic	novelGene_8299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAGTCTAGTATAGGAT	4472	False	NA	NA	False	NA	NA	NA	155486754	155486473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155486500_155486800
Isoform_138036_7	chr4	+	180	1	Intergenic	novelGene_8300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAGAAGATTTCC	1150	False	NA	NA	False	NA	NA	NA	155523757	155523937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_155523800_155523900
Isoform_13804_578	chr11	-	1263	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	53	5	-2	-5	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6814	False	NA	-9	True	AATAAA	-28	NA	69553415	69547527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
Isoform_138063_10	chr4	+	158	1	Intergenic	novelGene_8301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	2657	False	NA	NA	False	NA	NA	NA	155731004	155731162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_155731000_155731200
Isoform_138064_5	chr4	+	179	1	Intergenic	novelGene_8302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGGTAAAAAAAGCATTTG	NA	False	NA	NA	False	NA	NA	NA	155751848	155752027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_155751800_155752000
Isoform_138065_29	chr4	+	177	1	Intergenic	novelGene_8303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAAGTCATGT	NA	False	NA	NA	False	NA	NA	NA	155752169	155752346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_155752200_155752300
Isoform_138068_18	chr4	-	158	1	Intergenic	novelGene_8304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1184	False	NA	NA	False	NA	NA	NA	155773384	155773226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155773200_155773400
Isoform_138069_56	chr4	+	2122	1	FSM	ENSMUSG00000074738.3	ENSMUST00000099265.3	2140	1	22	-4	22	4	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTTGTGTGTTTAT	NA	False	NA	12	True	NA	NA	NA	155778820	155780942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155778800_155780900
Isoform_138071_4	chr4	+	3263	1	FSM	ENSMUSG00000074738.3	ENSMUST00000099265.3	2140	1	123	-1246	123	1246	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	155778921	155782184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_155778900_155782200
Isoform_138075_4	chr4	-	180	1	Intergenic	novelGene_8305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAATTAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	155799489	155799309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155799300_155799500
Isoform_138076_116	chr6	+	219	1	Intergenic	novelGene_9540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATTAATGCTGTTTAA	5803	False	NA	NA	False	NA	NA	NA	113313679	113313898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_113313700_113313900
Isoform_13808_34	chr11	-	1296	7	FSM	ENSMUSG00000018761.15	ENSMUST00000148242.8	971	7	-2	-323	-2	-7	multi-exon	FALSE	canonical	3	35	junction_4	228.446018423026	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAATTGTGTTTAGTGT	6814	False	NA	-11	True	AATAAA	-26	NA	69553415	69547529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548883_69549391_69549525_69549636_69549703_69553294
Isoform_138080_31	chr4	-	177	1	Intergenic	novelGene_8307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATATGTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	155848367	155848190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155848200_155848400
Isoform_138086_6	chr4	-	986	1	Antisense	novelGene_ENSMUSG00000029068.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAATACTAAA	NA	False	NA	NA	False	NA	NA	NA	155897442	155896456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_155896500_155897400
Isoform_138087_12	chr4	+	3558	1	NIC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	-2	198	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAGATAAAAACA	4635	False	NA	NA	False	NA	NA	NA	155896955	155900513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_155897000_155900500
Isoform_138088_9	chr4	-	164	1	Intergenic	novelGene_8308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155905807	155905643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155905600_155905800
Isoform_13809_18	chr11	-	1807	6	NIC	ENSMUSG00000018761.15	novel	1321	7	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	628	junction_2	17.9844377170931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6814	False	NA	-9	True	AATAAA	-28	NA	69553415	69547527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69549525_69549636_69549703_69553294
Isoform_138092_72	chr4	+	195	1	Intergenic	novelGene_8309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACACCTTCTTTCTTTC	779	False	NA	NA	False	NA	NA	NA	156015480	156015675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156015500_156015700
Isoform_138093_24	chr4	+	2063	1	NIC	ENSMUSG00000023286.17	novel	1309	7	NA	NA	5	-3213	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACAGGAAAATGTATG	762	False	NA	NA	False	NA	NA	NA	156028292	156030355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_156028300_156030400
Isoform_138100_9	chr4	+	256	1	Intergenic	novelGene_8310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATTCTCAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	156054067	156054323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156054100_156054300
Isoform_138102_3	chr4	-	3163	2	Genic_Genomic	ENSMUSG00000050796.5	novel	3184	1	NA	NA	-2	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGTGTTTGGATTCTTC	7208	False	NA	NA	False	TTTAAA	-18	NA	156077108	156073924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_156074983_156075003
Isoform_138103_3	chr4	-	2063	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	-80	1201	-80	-1201	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGTGAGCGTATG	7130	False	NA	NA	False	TTTAAA	-6	NA	156077186	156075123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_156075100_156077200
Isoform_138104_27	chr4	-	1936	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	7	1241	7	-1241	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTGTTTCTGAACA	7217	False	NA	NA	False	CATAAA	-15	NA	156077099	156075163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_156075200_156077100
Isoform_138105_3	chr4	-	1938	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	-26	1272	-26	-1272	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGTTTACACATAAATCA	7184	False	NA	NA	False	TTTAAA	-35	NA	156077132	156075194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_156075200_156077100
Isoform_138106_78	chr4	-	1796	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	14	1374	14	-1374	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATCTGTGGATTA	7224	False	NA	-1	True	ACTAAA	-18	NA	156077092	156075296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_156075300_156077100
Isoform_138108_13	chr4	-	1858	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	-49	1375	-49	-1375	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTGTATCTGTGGATT	7161	False	NA	-2	True	ACTAAA	-17	NA	156077155	156075297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_156075300_156077200
Isoform_13811_35	chr11	-	1176	6	FSM	ENSMUSG00000018761.15	ENSMUST00000125389.2	646	6	-70	-460	-1	-5	multi-exon	FALSE	canonical	3	53	junction_3	239.282761602252	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6815	False	NA	-9	True	AATAAA	-28	NA	69553414	69547527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69549391_69549525_69549636_69549703_69553294
Isoform_138111_7	chr4	-	6345	1	Antisense	novelGene_ENSMUSG00000029076.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156086273	156079928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_156079900_156086300
Isoform_138112_5	chr4	-	6448	1	Antisense	novelGene_ENSMUSG00000029076.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156086377	156079929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_156079900_156086400
Isoform_138113_6	chr4	+	180	1	Intergenic	novelGene_8311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAGGAAATG	NA	False	NA	NA	False	NA	NA	NA	156102691	156102871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156102700_156102900
Isoform_138114_29	chr5	-	181	1	Intergenic	novelGene_8915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTAT	NA	False	NA	NA	False	NA	NA	NA	124055802	124055621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124055600_124055800
Isoform_138115_28	chr4	+	176	1	Intergenic	novelGene_8312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	1142	False	NA	NA	False	NA	NA	NA	156187325	156187501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156187300_156187500
Isoform_138116_108	chr8	+	176	1	Intergenic	novelGene_10837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	105025914	105026090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_105025900_105026100
Isoform_138117_15	chr4	+	201	1	Intergenic	novelGene_8313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCATAAACACTTTACCA	NA	False	NA	NA	False	NA	NA	NA	156198637	156198838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_156198600_156198800
Isoform_138124_10	chr4	-	178	1	Intergenic	novelGene_8314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	156295743	156295565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_156295600_156295700
Isoform_138126_15	chr4	-	179	1	Intergenic	novelGene_8315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTGGAAAAAAATAAC	NA	False	NA	NA	False	NA	NA	NA	156299683	156299504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_156299500_156299700
Isoform_138131_143	chr4	-	176	1	Intergenic	novelGene_8316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	156374392	156374216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_156374200_156374400
Isoform_138133_5	chr4	-	953	1	Intergenic	novelGene_8317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156390747	156389794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_156389800_156390700
Isoform_138134_30	chr4	-	176	1	Intergenic	novelGene_8323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	156396845	156396669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_156396700_156396800
Isoform_138138_24	chr4	-	222	1	Intergenic	novelGene_7481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGACTGTAAAACCAT	NA	False	NA	NA	False	AAAAAG	-20	NA	34780949	34780727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_34780700_34780900
Isoform_138139_10	chr4	+	182	1	Intergenic	novelGene_7482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTAACTAATAAACTAC	NA	False	NA	NA	False	NA	NA	NA	34790167	34790349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_34790200_34790300
Isoform_138149_3	chr4	-	2549	1	Intergenic	novelGene_7483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAGAAAAAAAAAAA	4979	False	NA	NA	False	NA	NA	NA	34829884	34827335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_34827300_34829900
Isoform_13815_46	chr11	-	1201	6	FSM	ENSMUSG00000018774.14	ENSMUST00000018918.12	1230	6	27	2	27	-2	multi-exon	FALSE	canonical	3	102	junction_5	17.4653943556966	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTTTCTTTCCTCATT	3277	False	NA	-3	True	AATAAA	-17	NA	69556952	69555040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845
Isoform_138150_5	chr4	+	168	1	Intergenic	novelGene_7484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCTAA	NA	False	NA	NA	False	NA	NA	NA	34861817	34861985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_34861800_34862000
Isoform_138151_75	chr4	+	175	1	Intergenic	novelGene_7485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	34876196	34876371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_34876200_34876400
Isoform_138153_7	chr4	-	1159	1	Genic_Genomic	ENSMUSG00000039967.15	novel	NA	NA	NA	NA	-12	-78701	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAGGACCAA	NA	False	NA	NA	False	NA	NA	NA	34882972	34881813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_34881800_34883000
Isoform_138154_55	chr15	+	170	1	Intergenic	novelGene_4133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93144404	93144574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_93144400_93144600
Isoform_138157_8	chr4	+	227	1	Intergenic	novelGene_7486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGACAGGCCTTTCACT	NA	False	NA	NA	False	AAAAAG	-30	NA	35010807	35011034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_35010800_35011000
Isoform_138158_6	chr4	+	5189	1	Intergenic	novelGene_7487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATTTGAGACCAGAGA	NA	False	NA	NA	False	NA	NA	NA	35030456	35035645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_35030500_35035600
Isoform_138159_55	chr4	-	170	1	Intergenic	novelGene_7397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATCA	NA	False	NA	NA	False	NA	NA	NA	6517068	6516898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_6516900_6517100
Isoform_13816_15	chr11	-	1299	6	FSM	ENSMUSG00000018774.14	ENSMUST00000018918.12	1230	6	-71	2	-71	-2	multi-exon	FALSE	canonical	3	102	junction_5	17.4653943556966	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTTTCTTTCCTCATT	3179	False	NA	-3	True	AATAAA	-17	NA	69557050	69555040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845
Isoform_138161_68	chr4	+	176	1	Intergenic	novelGene_7488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35166510	35166686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_35166500_35166700
Isoform_138162_3	chr4	-	359	1	Intergenic	novelGene_7489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACACACACACACAA	NA	False	NA	NA	False	NA	NA	NA	35176286	35175927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_35175900_35176300
Isoform_138167_11	chr4	-	176	1	Intergenic	novelGene_7491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATAATTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	36587176	36587000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_36587000_36587200
Isoform_13817_11	chr11	-	781	5	FSM	ENSMUSG00000018774.14	ENSMUST00000154124.2	612	5	-76	-93	15	0	multi-exon	FALSE	canonical	3	24	junction_4	48.9540600971972	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCTTTCCTCATTAA	3265	False	NA	-1	True	AATAAA	-19	NA	69556964	69555038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556845
Isoform_138170_3	chr4	-	234	1	Intergenic	novelGene_7492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTCTGATAGATCCAA	NA	False	NA	NA	False	NA	NA	NA	37534427	37534193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_37534200_37534400
Isoform_138172_135	chr4	+	177	1	Intergenic	novelGene_7493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38983272	38983449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_38983300_38983400
Isoform_138175_14	chr4	+	278	1	Intergenic	novelGene_7495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAACCAAAACACTGCT	NA	False	NA	NA	False	NA	NA	NA	40214113	40214391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_40214100_40214400
Isoform_138178_22	chr4	-	201	1	Intergenic	novelGene_7496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATATGGAAAAAAAAGGAAT	7447	False	NA	NA	False	NA	NA	NA	40232358	40232157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_40232200_40232400
Isoform_138179_8	chr4	-	221	1	Intergenic	novelGene_7497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAGTCTGGAACAGTT	7985	False	NA	NA	False	NA	NA	NA	40253700	40253479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_40253500_40253700
Isoform_138190_4	chr4	-	2233	1	Antisense	novelGene_ENSMUSG00000028410.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTGCCTGATCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	40722386	40720153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_40720200_40722400
Isoform_138192_7	chr4	+	2683	1	Genic_Genomic	ENSMUSG00000083068.2	novel	NA	NA	NA	NA	-1205	361	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAGGAAAGGAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	8117414	8120097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_+_8117400_8120100
Isoform_138195_3	chr4	-	192	1	Intergenic	novelGene_7499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGACATAATGGTGCAT	1257	False	NA	NA	False	NA	NA	NA	40780627	40780435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_40780400_40780600
Isoform_138196_7	chr4	-	198	1	Intergenic	novelGene_7500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	40790037	40789839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_40789800_40790000
Isoform_138201_12	chr4	+	159	1	Intergenic	novelGene_7501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	8199	False	NA	NA	False	NA	NA	NA	40861573	40861732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_40861600_40861700
Isoform_138202_60	chr4	+	177	1	Intergenic	novelGene_7502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTCTTTTTTAATCC	NA	False	NA	NA	False	NA	NA	NA	40907804	40907981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_40907800_40908000
Isoform_138203_12	chr4	+	194	1	Intergenic	novelGene_7503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTTAAAAAGATTAAT	NA	False	NA	NA	False	NA	NA	NA	40909691	40909885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_40909700_40909900
Isoform_138205_49	chr4	+	3425	1	Intergenic	novelGene_7398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTCGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	8133524	8136949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_8133500_8136900
Isoform_138208_34	chr4	+	178	1	Intergenic	novelGene_7504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAAAAAAGGCTTTAG	NA	False	NA	NA	False	NA	NA	NA	40943385	40943563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_40943400_40943600
Isoform_138211_16	chr4	+	793	1	NIC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	66	-40405	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-20	True	NA	NA	False	NA	NA	NA	40970971	40971764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr4_+_40971000_40971800
Isoform_138212_4	chr4	-	1168	1	Intergenic	novelGene_7505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCAATCCAGCCTCATT	NA	False	NA	NA	False	NA	NA	NA	41002132	41000964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_41001000_41002100
Isoform_138213_5	chr4	-	183	1	Intergenic	novelGene_7506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATATAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	41006989	41006806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_41006800_41007000
Isoform_138214_11	chr4	+	154	1	Intergenic	novelGene_7507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTAGCTAGCTA	NA	False	NA	NA	False	NA	NA	NA	41021192	41021346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_41021200_41021300
Isoform_138217_18	chr4	+	171	1	Intergenic	novelGene_7508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	41060726	41060897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_41060700_41060900
Isoform_138219_7	chr4	+	630	1	Intergenic	novelGene_7399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	8154772	8155402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_8154800_8155400
Isoform_138225_3	chr4	-	182	1	Intergenic	novelGene_7509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAACCTTTCTTCCT	4847	False	NA	NA	False	NA	NA	NA	41109844	41109662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_41109700_41109800
Isoform_138228_41	chr7	-	168	1	Intergenic	novelGene_9776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	3851716	3851548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3851500_3851700
Isoform_138230_22	chr4	+	176	1	Intergenic	novelGene_7511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAACCATTTAGATAA	NA	False	NA	NA	False	NA	NA	NA	41176996	41177172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_41177000_41177200
Isoform_138233_4	chr4	+	231	1	Intergenic	novelGene_7400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGAAGATACTGTTACTA	NA	False	NA	NA	False	NA	NA	NA	8181116	8181347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_8181100_8181300
Isoform_138237_3	chr4	+	179	1	Intergenic	novelGene_7513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	41235906	41236085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_41235900_41236100
Isoform_138242_23	chr4	-	175	1	Intergenic	novelGene_7514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCTTTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	41337266	41337091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_41337100_41337300
Isoform_138243_3	chr4	-	175	1	Intergenic	novelGene_7515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGAAGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	41342849	41342674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_41342700_41342800
Isoform_138244_5	chr4	-	170	1	Intergenic	novelGene_7516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAACTTTATAG	NA	False	NA	NA	False	NA	NA	NA	41345597	41345427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_41345400_41345600
Isoform_138246_4	chr4	-	228	1	Intergenic	novelGene_7517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGTCTACTAATTAACCA	NA	False	NA	NA	False	NA	NA	NA	41365533	41365305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_41365300_41365500
Isoform_138250_303	chr4	+	187	1	Intergenic	novelGene_7518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATGCCTTCACAA	NA	False	NA	NA	False	NA	NA	NA	41485042	41485229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_41485000_41485200
Isoform_138259_3	chr4	+	193	1	Intergenic	novelGene_7519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGCTTCTTTCTTTACA	NA	False	NA	NA	False	NA	NA	NA	41541902	41542095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_41541900_41542100
Isoform_138260_6	chr4	-	1480	1	Genic_Genomic	ENSMUSG00000036114.4	novel	NA	NA	NA	NA	23	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTGTTGTGTAAGT	-2	True	NA	-16	True	AATAAA	-15	NA	41713511	41712031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr4_-_41712000_41713500
Isoform_138265_6	chr4	-	186	1	Antisense	novelGene_ENSMUSG00000102504.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAATTGAATAAGTTG	NA	False	NA	NA	False	NA	NA	NA	42719215	42719029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_42719000_42719200
Isoform_138266_11	chr4	-	186	1	Intergenic	novelGene_7520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAATTGAATAAGTTG	NA	False	NA	NA	False	NA	NA	NA	42529705	42529519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_42529500_42529700
Isoform_138267_3	chr4	-	177	1	Intergenic	novelGene_7521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42814701	42814524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_42814500_42814700
Isoform_138269_4	chr4	-	197	1	Intergenic	novelGene_7522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTATATGAGCACACTG	NA	False	NA	NA	False	NA	NA	NA	42881837	42881640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_42881600_42881800
Isoform_138276_6	chr4	+	176	1	Intergenic	novelGene_7523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGGAGATGAG	NA	False	NA	NA	False	NA	NA	NA	43035145	43035321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_43035100_43035300
Isoform_138277_12	chr4	-	176	1	Intergenic	novelGene_7524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	43053915	43053739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_43053700_43053900
Isoform_138279_10	chr4	+	198	1	Intergenic	novelGene_7525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAAAACCAAAACCCC	NA	False	NA	NA	False	NA	NA	NA	43081695	43081893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_43081700_43081900
Isoform_138280_4	chr4	-	182	1	Intergenic	novelGene_7526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAATTAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	43088848	43088666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_43088700_43088800
Isoform_138281_4	chr4	+	162	1	Intergenic	novelGene_7527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAAAAAAAAACCCTA	NA	False	NA	NA	False	NA	NA	NA	43154934	43155096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_43154900_43155100
Isoform_138284_39	chr4	+	182	1	Intergenic	novelGene_7528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTATAGCATAG	NA	False	NA	NA	False	NA	NA	NA	43432672	43432854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_43432700_43432900
Isoform_138285_4	chr4	+	179	1	Intergenic	novelGene_7529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAGCATACTTTT	3686	False	NA	NA	False	NA	NA	NA	43485965	43486144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_43486000_43486100
Isoform_138287_16	chr4	+	161	1	Intergenic	novelGene_7530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAACCAAATAGCT	7763	False	NA	NA	False	NA	NA	NA	43516637	43516798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_43516600_43516800
Isoform_138291_3	chr4	+	681	1	ISM	ENSMUSG00000028468.16	ENSMUST00000107886.9	5888	9	8084	8	5585	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAATGTTAAGTGTCT	7851	False	NA	2	True	AATAAA	-6	NA	43586798	43587479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr4_+_43586800_43587500
Isoform_138295_5	chr4	+	176	1	Intergenic	novelGene_7401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATTAGTTGATC	NA	False	NA	NA	False	NA	NA	NA	8643785	8643961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_8643800_8644000
Isoform_138299_7	chr4	+	311	1	Intergenic	novelGene_7531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAATCAAGACGCTAAT	NA	False	NA	NA	False	AATGAA	-5	NA	43891688	43891999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_43891700_43892000
Isoform_138302_44	chr4	+	180	1	Intergenic	novelGene_7532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTAACA	7239	False	NA	NA	False	NA	NA	NA	44011685	44011865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_44011700_44011900
Isoform_138309_48	chr4	-	199	1	Intergenic	novelGene_7533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTAGTTATAATACTG	NA	False	NA	NA	False	NA	NA	NA	44093688	44093489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_44093500_44093700
Isoform_138310_73	chr19	+	177	1	Intergenic	novelGene_5690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16684151	16684328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_16684200_16684300
Isoform_138314_28	chr4	+	234	1	Intergenic	novelGene_7534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTATTAGTGTACAAAAAA	NA	False	NA	NA	False	AAAAAG	-6	NA	44198734	44198968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_44198700_44199000
Isoform_138315_3	chr4	-	174	1	Intergenic	novelGene_7535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	44213551	44213377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_44213400_44213600
Isoform_138316_158	chr4	+	186	1	Intergenic	novelGene_7536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATACATTAAAAAAA	NA	False	NA	6	True	NA	NA	NA	44223152	44223338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_44223200_44223300
Isoform_138317_11	chr4	+	174	1	Intergenic	novelGene_7537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	44246743	44246917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_44246700_44246900
Isoform_138318_14	chr4	-	183	1	Intergenic	novelGene_7538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGTACTCCCAAA	NA	False	NA	NA	False	NA	NA	NA	44248511	44248328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_44248300_44248500
Isoform_138319_7	chr4	-	177	1	Intergenic	novelGene_7539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAGAGGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	44280077	44279900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_44279900_44280100
Isoform_138320_5	chr4	-	175	1	Intergenic	novelGene_7540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44284864	44284689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_44284700_44284900
Isoform_138321_6	chr4	-	1077	1	Antisense	novelGene_ENSMUSG00000035683.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	44309119	44308042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_44308000_44309100
Isoform_138322_5	chr4	+	179	1	Intergenic	novelGene_7402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGACTTTAAAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	8685797	8685976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_8685800_8686000
Isoform_138323_23	chr4	+	175	1	Intergenic	novelGene_7541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAAGCAGCTGTTGGAA	NA	False	NA	NA	False	NA	NA	NA	44554748	44554923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_44554700_44554900
Isoform_138325_10	chr4	-	1065	1	FSM	ENSMUSG00000080916.4	ENSMUST00000118271.2	849	1	-69	-147	-69	147	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGGAGACAAAACCAGA	NA	False	NA	NA	False	ATTAAA	-39	NA	44753194	44752129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_44752100_44753200
Isoform_138326_7	chr4	+	177	1	Intergenic	novelGene_7542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACTCATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	44861887	44862064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_44861900_44862100
Isoform_138330_4	chr4	-	176	1	Intergenic	novelGene_7543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATATACCTATA	NA	False	NA	NA	False	NA	NA	NA	45023829	45023653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_45023700_45023800
Isoform_138331_3	chr4	+	176	1	Intergenic	novelGene_7544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCACAGCGAGCGCAGTT	NA	False	NA	NA	False	NA	NA	NA	45042647	45042823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_45042600_45042800
Isoform_138332_21	chr5	-	2336	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	30	2	30	-2	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTGCTATCTGCGTG	1504	False	NA	-11	True	AATAAA	-19	NA	3646555	3633979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
Isoform_138334_151	chr5	-	1885	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	479	4	-24	-4	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGTGTGCTATCTGCG	1953	False	NA	-13	True	AATAAA	-17	NA	3646106	3633981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
Isoform_138337_3	chr5	-	3092	4	ISM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	491	4200	-12	2601	5prime_fragment	FALSE	canonical	3	107	junction_1	32.6019767635168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	1965	False	NA	NA	False	NA	NA	NA	3646094	3638177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_3640804_3641669_3641816_3645254_3645446_3645965
Isoform_138341_20	chr5	-	2562	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-21	4	-21	-4	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTTTATTTTGGATTT	NA	False	NA	48	True	ATTAAA	-13	NA	3697955	3689964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
Isoform_138342_111	chr5	-	1605	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-23	963	-23	366	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATGTAGTGTCTATTT	NA	False	NA	28	True	NA	NA	NA	3697957	3690923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
Isoform_138346_51	chr5	-	1427	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	-149	0	-21	0	multi-exon	FALSE	canonical	3	421	junction_2	22.2910046630673	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTTACTTTATGCAT	NA	False	NA	-8	True	NA	NA	NA	3697955	3693076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
Isoform_138349_14	chr5	-	6190	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-186	422	-186	-422	multi-exon	FALSE	canonical	3	27	junction_3	19.1839036868105	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTCCATTTTTGTCT	NA	False	NA	-8	True	ATTAAA	-14	NA	3853111	3740421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
Isoform_138350_7	chr5	-	6609	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-183	0	-183	0	multi-exon	TRUE	canonical	3	27	junction_3	19.1839036868105	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATTCTCTGCCTTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	3853108	3739999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
Isoform_138354_35	chr5	-	6206	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-184	-422	combination_of_known_junctions	FALSE	canonical	3	68	junction_14	13.2648286332828	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTCCATTTTTGTCT	NA	False	NA	-8	True	ATTAAA	-14	NA	3853109	3740421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
Isoform_138355_24	chr5	-	6628	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-184	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_14	13.2648286332828	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATTCTCTGCCTTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	3853109	3739999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
Isoform_138357_6	chr5	-	5329	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-31014	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	19.9700030147259	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTCTCTGCCTTCTGGTG	NA	False	NA	-2	True	AATAAA	-21	NA	3783146	3739996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
Isoform_138358_8	chr5	-	4885	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-30995	-422	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	19.9700030147259	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTCCATTTTTGTCT	NA	False	NA	-8	True	ATTAAA	-14	NA	3783127	3740421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
Isoform_138361_8	chr5	-	1146	5	NNC	ENSMUSG00000040351.12	novel	2572	19	NA	NA	-30979	11532	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	33.9742549587184	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGGAATTTTTTTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	3783111	3772147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
Isoform_138362_11	chr5	-	1895	6	FSM	ENSMUSG00000040351.12	ENSMUST00000199763.2	1569	6	-327	1	-189	-1	multi-exon	FALSE	canonical	3	68	junction_5	15.4324333790883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTTAGTTTATAGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	3853114	3783680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
Isoform_138365_49	chr5	-	1355	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	20	1	-6	-1	multi-exon	FALSE	canonical	3	112	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	3943913	3940581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3941898_3943874
Isoform_138369_735	chr5	-	2669	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	290	972	-35	-972	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGTACTGGCTGG	NA	False	NA	-5	True	NA	NA	NA	4154456	4132116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_138374_88	chr5	-	2968	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	-9	972	-9	-972	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGTACTGGCTGG	NA	False	NA	-5	True	NA	NA	NA	4154755	4132116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_138375_22	chr5	-	3905	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	28	-2	28	2	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTTCTTTGCCAATGT	NA	False	NA	-20	True	ATTAAA	-24	NA	4154718	4131142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_138378_128	chr5	-	3622	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	313	-4	-12	4	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTTTGCCAATGTAG	NA	False	NA	-18	True	ATTAAA	-26	NA	4154433	4131140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_138382_30	chr5	-	3671	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	264	-4	-61	4	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTTTGCCAATGTAG	NA	False	NA	-18	True	ATTAAA	-26	NA	4154482	4131140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_138384_33	chr5	-	3185	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	264	482	-61	-482	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTTTGTATTCATGA	NA	False	NA	-2	True	ATTAAA	-17	NA	4154482	4131626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_138397_9	chr5	-	3600	4	ISM	ENSMUSG00000046798.15	ENSMUST00000179804.8	3752	5	444	96	104	0	3prime_fragment	FALSE	canonical	2	3	junction_3	30.169889330626	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564345	5555110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564231
Isoform_138398_11	chr5	-	3591	4	FSM	ENSMUSG00000046798.15	ENSMUST00000115445.8	3477	4	-2	-112	-2	0	multi-exon	FALSE	canonical	3	7	junction_3	28.2842712474619	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564732	5555110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564627
Isoform_138400_76	chr5	-	3566	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	30	1	-18	-1	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTCTCTGTCCTTTTC	NA	False	NA	-4	True	ATTAAA	-16	NA	5564843	5555109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
Isoform_138401_32	chr5	-	3634	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	-39	2	0	0	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564912	5555110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
Isoform_138402_11	chr5	-	3713	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	-117	1	-32	-1	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTCTCTGTCCTTTTC	NA	False	NA	-4	True	ATTAAA	-16	NA	5564990	5555109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
Isoform_138403_3	chr5	-	3660	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	30	-93	-18	-1	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCTGCGTGCCCTGGTC	NA	False	NA	90	True	AATAAA	-15	NA	5564843	5555015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
Isoform_138404_7	chr5	-	3707	4	NIC	ENSMUSG00000046798.15	novel	3597	4	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	26.5455583227527	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTCTCTGTCCTTTTC	NA	False	NA	-4	True	ATTAAA	-16	NA	5564912	5555109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_5558455_5561070_5561195_5563161_5563252_5564764
Isoform_138405_10	chr5	-	3651	4	NIC	ENSMUSG00000046798.15	novel	3597	4	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	26.5455583227527	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564857	5555110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_5558455_5561070_5561195_5563161_5563252_5564764
Isoform_138406_12	chr5	-	3008	11	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	110.515564514687	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTAGTTTCTGTTCCTA	NA	False	NA	NA	False	GATAAA	-16	NA	5609501	5587456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5604823_5604900_5605237_5605383_5606064_5606157_5607212_5607407_5609432
Isoform_138408_231	chr5	-	2933	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	38	1	13	-1	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGTTTCTGTTCCTAAT	NA	False	NA	NA	False	GATAAA	-18	NA	5609500	5587454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
Isoform_138413_51	chr5	-	2987	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	83.4476253277438	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5609500	5587455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
Isoform_138417_3	chr5	-	3150	23	FSM	ENSMUSG00000040473.16	ENSMUST00000054865.13	4956	23	0	1806	0	44	multi-exon	FALSE	canonical	2	4	junction_19	2.58132197536376	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAAGTTAGGATAAT	NA	False	NA	71	True	AATAAA	-21	NA	5714239	5631083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
Isoform_138419_5	chr5	-	6547	9	NNC	ENSMUSG00000015653.14	novel	3657	6	NA	NA	-24	2407	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	15.2269292702107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTCTGCTTTTCTATC	5260	False	NA	NA	False	ATTAAA	-19	NA	5744091	5718530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_5720029_5720066_5720729_5720762_5720879_5720900_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743957
Isoform_138420_13	chr5	-	3497	6	FSM	ENSMUSG00000015653.14	ENSMUST00000115426.9	10408	6	11	6900	11	1	multi-exon	FALSE	canonical	3	8	junction_5	11.3384302264467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTTCCCACCATT	4784	False	NA	NA	False	AATAAA	-20	NA	5744567	5721728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
Isoform_138421_4	chr5	-	6601	9	NNC	ENSMUSG00000015653.14	novel	10408	6	NA	NA	11	2407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.1389398572027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTCTGCTTTTCTATC	4784	False	NA	NA	False	ATTAAA	-19	NA	5744567	5718530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_5720029_5720066_5720729_5720762_5720879_5720900_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
Isoform_138422_7	chr5	-	1204	5	FSM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	22	4	22	4	multi-exon	FALSE	canonical	3	19	junction_3	6.38357266740185	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTGTATCACAACTG	NA	False	NA	NA	False	AATAAA	-22	NA	5799304	5786320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5786674_5789795_5789961_5790349_5790863_5792825_5792941_5799246
Isoform_138425_3	chr5	-	3230	29	NIC	ENSMUSG00000040537.18	novel	9161	30	NA	NA	-96	339	combination_of_known_junctions	TRUE	canonical	3	20	junction_18	5.47955383257448	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTAGCAGGTTTT	5965	False	NA	-4	True	AATAAA	-14	NA	8418256	8128346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
Isoform_138427_88	chr5	-	2364	12	FSM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	-1	38	0	0	multi-exon	FALSE	canonical	3	32	junction_5	130.994164276048	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8472681	8447010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454914_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
Isoform_138428_58	chr5	-	2440	12	FSM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	-77	38	-41	0	multi-exon	FALSE	canonical	3	32	junction_5	130.994164276048	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8472757	8447010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454914_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
Isoform_138435_734	chr5	-	2367	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	35	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8472681	8447010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
Isoform_138436_25	chr5	-	2484	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	-82	0	-82	0	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8472798	8447010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
Isoform_138437_47	chr5	-	3663	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	33	-1294	-2	1256	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTTTAGTTTTTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	8472683	8445716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
Isoform_138449_18	chr5	-	3765	11	FSM	ENSMUSG00000040570.15	ENSMUST00000115378.2	1891	11	56	-1930	56	-3	multi-exon	FALSE	canonical	3	15	junction_2	15.6920361967464	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTACTGGTCTTTTTCCT	NA	False	NA	-2	True	ATTAAA	-16	NA	8672896	8540336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_8542590_8544783_8544906_8562260_8562408_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
Isoform_138452_51	chr5	-	3611	10	FSM	ENSMUSG00000040570.15	ENSMUST00000047485.15	3677	10	64	2	64	-2	multi-exon	FALSE	canonical	3	27	junction_2	10.9352753469485	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTACTGGTCTTTTTCCTT	NA	False	NA	-1	True	ATTAAA	-17	NA	8672888	8540335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_8542590_8544783_8544906_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
Isoform_138453_10	chr5	-	3761	10	FSM	ENSMUSG00000040570.15	ENSMUST00000047485.15	3677	10	-86	2	-86	-2	multi-exon	FALSE	canonical	3	27	junction_2	10.9352753469485	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTACTGGTCTTTTTCCTT	NA	False	NA	-1	True	ATTAAA	-17	NA	8673038	8540335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_8542590_8544783_8544906_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
Isoform_138456_3	chr5	-	3497	9	NIC	ENSMUSG00000040570.15	novel	3677	10	NA	NA	55	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	18.0398863632785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTACTGGTCTTTTTCCT	NA	False	NA	-2	True	ATTAAA	-16	NA	8672897	8540336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_8542590_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
Isoform_138460_250	chr5	-	2637	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	180	179	-102	-179	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTAGAGCTAGCAGCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	9047144	9016211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
Isoform_138461_24	chr5	-	2687	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	130	179	130	-179	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTAGAGCTAGCAGCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	9047194	9016211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
Isoform_138463_129	chr5	-	2816	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	180	0	-102	0	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGTTGAAAACAATGATTGT	NA	False	NA	-11	True	AATAAA	-30	NA	9047144	9016032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
Isoform_138477_151	chr5	-	3678	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	60	68	0	-1	multi-exon	FALSE	canonical	3	130	junction_6	37.7529760049699	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGAGCCATGCAATT	NA	False	NA	-2	True	AATAAA	-23	NA	9211716	9168868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
Isoform_138480_111	chr5	-	3703	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	34	69	1	-2	multi-exon	FALSE	canonical	3	130	junction_6	37.7529760049699	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211742	9168869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
Isoform_138482_21	chr5	-	3574	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_14	61.258640972111	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211736	9168869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
Isoform_138484_11	chr5	-	3784	18	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	60.4775688348989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGAGCCATGCAATT	NA	False	NA	-2	True	AATAAA	-23	NA	9211769	9168868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176803_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
Isoform_138487_168	chr5	-	3468	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	33	-3	0	-1	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGAGCCATGCAATT	NA	False	NA	-2	True	AATAAA	-23	NA	9211716	9168868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
Isoform_138488_40	chr5	-	3508	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	-7	-3	3	-1	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGAGCCATGCAATT	NA	False	NA	-2	True	AATAAA	-23	NA	9211756	9168868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
Isoform_138490_12	chr5	-	3549	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	13	-64	1	-7	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211736	9168807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
Isoform_138494_7	chr5	-	3415	16	NIC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	63.5882588743132	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCAAGATTTTGAGCCA	NA	False	NA	-9	True	AATAAA	-16	NA	9211756	9168875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
Isoform_138497_369	chr5	-	3228	8	FSM	ENSMUSG00000057614.7	ENSMUST00000074694.7	3135	8	-93	0	-93	0	multi-exon	FALSE	canonical	3	135	junction_3	12.7711409363583	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCTATTGACTGAATTT	NA	False	NA	-7	True	AATAAA	-21	NA	18565446	18470132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_18472208_18476823_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
Isoform_138499_9	chr5	-	4206	8	FSM	ENSMUSG00000057614.7	ENSMUST00000074694.7	3135	8	-128	-943	-128	943	multi-exon	FALSE	canonical	3	135	junction_3	12.7711409363583	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAAGCATTTCTTTCTGA	NA	False	NA	NA	False	AATAAA	-26	NA	18565481	18469189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_18472208_18476823_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
Isoform_138504_56	chr5	-	4702	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-12	-106	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	51.0853143531539	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087134	20963766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_138506_5	chr5	-	4721	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	1	5	combination_of_known_junctions	TRUE	canonical	3	53	junction_9	51.0853143531539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTTCATAGTTTGTTTAA	NA	False	NA	1	True	AATAAA	-18	NA	21087042	20963655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_138509_11	chr5	-	4509	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	15	-106	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	67.1548758002723	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087107	20963766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_138512_179	chr5	-	4653	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	80	107	1	-107	multi-exon	FALSE	canonical	3	159	junction_9	38.2607155309617	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087042	20963767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_138516_65	chr5	-	4722	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	12	106	12	-106	multi-exon	FALSE	canonical	3	159	junction_9	38.2607155309617	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087110	20963766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_138520_14	chr5	-	4555	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	10	-109	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	58.3812563563855	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087112	20963769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_138523_32	chr5	-	2462	8	FSM	ENSMUSG00000039987.16	ENSMUST00000140147.2	2000	8	-31	-431	15	431	multi-exon	FALSE	canonical	3	167	junction_2	38.2152870362805	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTATGTGTAGTTTAA	NA	False	NA	-17	True	NA	NA	NA	21087107	20997868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_138527_37	chr5	-	5539	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	14	-3	14	3	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTTACCTTTGTTTTG	NA	False	NA	-15	True	AATAAA	-21	NA	21156806	21098022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
Isoform_138539_47	chr5	-	3379	18	FSM	ENSMUSG00000028771.14	ENSMUST00000030556.8	3280	18	-100	1	-100	0	multi-exon	FALSE	canonical	3	41	junction_17	13.1951023733656	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTGTATTGTTTTTTT	NA	False	NA	-2	True	ATTAAA	-24	NA	21261009	21191643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646
Isoform_138543_10	chr5	-	3502	18	FSM	ENSMUSG00000028771.14	ENSMUST00000030556.8	3280	18	-222	0	-222	0	multi-exon	FALSE	canonical	3	41	junction_17	13.1951023733656	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTATTGTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-25	NA	21261131	21191642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646
Isoform_138544_7	chr5	-	3207	17	NIC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	18.4483019205021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATTGTATTGTTTTTT	NA	False	NA	-3	True	ATTAAA	-23	NA	21260947	21191644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21260646
Isoform_138545_5	chr5	-	3284	17	NIC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	18.4483019205021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTATTGTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-25	NA	21261022	21191642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21260646
Isoform_138561_7	chr5	-	3952	5	FSM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	-4	6	-2	-4	multi-exon	FALSE	canonical	3	8	junction_4	48.8108594474631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTACTTGAAAAGATACC	NA	False	NA	NA	False	AATAAA	-13	NA	21906396	21867904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21905972
Isoform_138563_22	chr5	-	3627	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	21	76	19	-76	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTCTACTCTTGTTA	NA	False	NA	NA	False	AATAAA	-7	NA	21906373	21867976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
Isoform_138564_22	chr5	-	3706	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	20	-2	18	0	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGATACCTGAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	21906374	21867898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
Isoform_138567_4	chr5	-	3081	2	ISM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	17494	10865	17494	-10863	internal_fragment	FALSE	canonical	3	67	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCACATGTAAGCTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	21888898	21878763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_21881100_21888153
Isoform_138579_958	chr5	-	2082	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	51	0	-15	0	multi-exon	FALSE	canonical	3	849	junction_11	91.8299209136107	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATAGTCATCATTTAA	NA	False	NA	3	True	AATAAA	-30	NA	21990198	21962264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
Isoform_13858_8217	chr11	-	1771	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2	1	0	0	multi-exon	TRUE	canonical	3	9657	junction_10	1402.57834362292	8217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563141	69557762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
Isoform_138580_380	chr5	-	2123	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	12	-2	12	2	multi-exon	FALSE	canonical	3	849	junction_11	91.8299209136107	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAGTCATCATTTAAAA	NA	False	NA	5	True	AATAAA	-32	NA	21990237	21962262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
Isoform_138598_46	chr5	-	1972	14	NIC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	150.475380832502	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755336	22691486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751503_22752921_22753015_22755189
Isoform_138601_1104	chr5	-	2085	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	18	0	18	0	multi-exon	FALSE	canonical	3	527	junction_10	41.6678895284064	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755355	22691486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
Isoform_138604_122	chr5	-	2085	14	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	18	-2	at_least_one_novel_splicesite	TRUE	canonical	3	41	junction_13	150.386877811036	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTTCTTTGGTTC	NA	False	NA	-5	True	AATAAA	-16	NA	22755355	22691484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753013_22755189
Isoform_138615_217	chr5	-	3580	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-11	-691	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23880976	23711140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_138616_15	chr5	-	5362	16	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-11	1091	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCCTCTTCATTCTATT	NA	False	NA	NA	False	AATAAA	-10	NA	23880976	23709358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_138617_41	chr5	-	5177	16	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-11	906	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATCTAATTTCTTGAGT	NA	False	NA	-8	True	ATTAAA	-26	NA	23880976	23709543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_138623_10	chr5	-	3604	17	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	4	-689	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_15	90.8021329251136	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTGCTTATTACC	NA	False	NA	-4	True	ATTAAA	-23	NA	23880961	23711138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
Isoform_138624_63	chr5	-	3555	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-10	-688	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23880975	23711137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_138626_6	chr5	-	5177	16	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	18	915	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGAGTTTGCTGTTT	NA	False	NA	1	True	ATTAAA	-35	NA	23880994	23709534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_138628_6	chr5	-	5366	16	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	21	-1081	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGACGTATTTCAGAAT	NA	False	NA	NA	False	AATAAA	-26	NA	23880991	23709342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_138637_7	chr5	-	972	10	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-7	-1059	combination_of_known_splicesites	FALSE	canonical	3	29	junction_8	98.3694221284061	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTCACATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	23880972	23731787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
Isoform_138641_6	chr5	-	2266	4	NIC	ENSMUSG00000105987.5	novel	345	4	NA	NA	1	3	intron_retention	FALSE	canonical	1	2	junction_1	7.54247233265651	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTAGTCTGAGGTCTTCT	5258	False	NA	NA	False	NA	NA	NA	23917663	23903290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_23905455_23915363_23915407_23916113_23916149_23917639
Isoform_138649_393	chr5	-	3371	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	36	0	36	0	multi-exon	TRUE	canonical	3	301	junction_13	29.1369181623589	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTAAAAATCTTGTC	NA	False	NA	-8	True	AATAAA	-24	NA	23988673	23945645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
Isoform_138652_289	chr5	-	3406	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	1	0	1	0	multi-exon	FALSE	canonical	3	301	junction_13	29.1369181623589	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTAAAAATCTTGTC	NA	False	NA	-8	True	AATAAA	-24	NA	23988708	23945645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
Isoform_138661_1148	chr5	-	390	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	26	709	26	-709	multi-exon	FALSE	canonical	3	3790	junction_2	61.5	1148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGCCTTTCATACTT	NA	False	NA	-30	True	AATAAA	-17	NA	24049133	24044650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24044827_24046707_24046757_24048968
Isoform_138665_8	chr5	-	5870	12	NIC	ENSMUSG00000028995.15	novel	2195	11	NA	NA	-10	-97	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.3033446430527	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTGTACATTTGTATA	NA	False	NA	NA	False	AATAAA	-19	NA	24235698	24166025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
Isoform_138669_7	chr5	-	5899	12	NIC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	16	0	combination_of_known_junctions	TRUE	canonical	3	47	junction_11	7.3033446430527	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235630	24165928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
Isoform_138671_17	chr5	-	4283	15	FSM	ENSMUSG00000038319.15	ENSMUST00000036092.10	4221	15	-87	25	-87	-25	multi-exon	FALSE	canonical	3	15	junction_8	4.79157423749955	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCAGGGTGCTGGTTAG	NA	False	NA	-31	True	NA	NA	NA	24556689	24524611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
Isoform_138672_14	chr5	-	4349	15	FSM	ENSMUSG00000038319.15	ENSMUST00000036092.10	4221	15	-151	23	-151	-23	multi-exon	FALSE	canonical	3	15	junction_8	4.79157423749955	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGGGTGCTGGTTAGCT	NA	False	NA	-29	True	NA	NA	NA	24556753	24524609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
Isoform_138674_6	chr5	-	1996	9	NIC	ENSMUSG00000038295.15	novel	1837	10	NA	NA	95	-179	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	7.95986023746648	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	9389	False	NA	NA	False	ATTAAA	-14	NA	24592869	24589357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592654
Isoform_138675_22	chr5	-	1999	9	ISM	ENSMUSG00000038295.15	ENSMUST00000059401.7	3902	14	4237	179	60	-179	3prime_fragment	FALSE	canonical	3	11	junction_1	5.09748712602592	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	9354	False	NA	NA	False	ATTAAA	-14	NA	24592904	24589357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686
Isoform_138676_6	chr5	-	2091	9	ISM	ENSMUSG00000038295.15	ENSMUST00000059401.7	3902	14	4144	180	-33	-180	3prime_fragment	FALSE	canonical	3	11	junction_1	5.09748712602592	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTTTCAATCATTGTA	9261	False	NA	NA	False	ATTAAA	-13	NA	24592997	24589358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686
Isoform_138678_22	chr5	-	2124	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-53	12	at_least_one_novel_splicesite	FALSE	non_canonical	2	111	junction_3	23.9707121571787	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGCCTATAATCTCAAT	NA	False	NA	1	True	TATAAA	-17	NA	24628581	24623226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
Isoform_138679_120	chr5	-	1169	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-54	191	at_least_one_novel_splicesite	FALSE	non_canonical	2	111	junction_3	23.9707121571787	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGATATGGTGGTGG	NA	False	NA	-9	True	CATAAA	-18	NA	24628582	24624182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
Isoform_138680_9	chr5	-	1264	11	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-42	189	intron_retention	FALSE	non_canonical	2	111	junction_3	24.5277393984851	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGATGATATGGTGGT	NA	False	NA	-11	True	CATAAA	-16	NA	24628570	24624184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627557_24627645_24627714_24627795_24627885_24628446
Isoform_138681_3	chr5	-	1711	10	NIC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-40	191	intron_retention	FALSE	canonical	3	152	junction_6	16.739839372653	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGATATGGTGGTGG	NA	False	NA	-9	True	CATAAA	-18	NA	24628568	24624182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24624461_24624597_24624679_24624780_24625327_24625490_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
Isoform_138684_258	chr5	-	2551	9	FSM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	2	-1	1	0	multi-exon	FALSE	canonical	3	1095	junction_1	118.721049102508	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650183	24646036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_138685_43	chr5	-	2666	9	FSM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	-113	-1	-13	0	multi-exon	FALSE	canonical	3	1095	junction_1	118.721049102508	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650298	24646036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_138691_560	chr5	-	1873	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	19	1	19	0	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650266	24646037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
Isoform_138692_1441	chr5	-	1792	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	101	0	0	0	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
Isoform_138693_46	chr5	-	1882	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_9	388.340279702616	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650063
Isoform_138700_66	chr5	-	1808	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_5	369.485762100601	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650183	24646036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
Isoform_138703_100	chr5	-	2649	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1095	junction_1	125.764762593519	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650183	24646036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_138704_45	chr5	-	2693	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	9	0	intron_retention	FALSE	canonical	3	1095	junction_1	125.764762593519	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650227	24646036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_138705_38	chr5	-	1889	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1073	junction_8	125.284675838668	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650183	24646036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
Isoform_138708_36	chr5	-	2626	8	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1095	junction_1	123.84074697871	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAAGTCTTGTTTCTG	NA	False	NA	-6	True	NA	NA	NA	24650192	24646038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_138735_84	chr5	-	1277	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	51	5	-12	3	multi-exon	FALSE	canonical	3	68	junction_2	11	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGTGTCTGTGTGTTG	NA	False	NA	-1	True	ATTAAA	-21	NA	24652801	24650460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24651272_24651531_24651951_24652754
Isoform_138736_13	chr5	-	1339	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	-12	6	-12	2	multi-exon	FALSE	canonical	3	68	junction_2	11	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTGTGTCTGTGTGTT	NA	False	NA	-2	True	ATTAAA	-20	NA	24652864	24650461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24651272_24651531_24651951_24652754
Isoform_138737_3	chr5	-	1078	2	NNC	ENSMUSG00000067724.6	novel	3475	2	NA	NA	14799	-1452	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTATTTTGTCTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	24717401	24709206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_24710138_24717254
Isoform_138758_5553	chr5	-	2518	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	51	0	51	0	multi-exon	FALSE	canonical	3	1197	junction_13	122.348082348837	5553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782414	24770342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
Isoform_138779_208	chr5	-	1435	12	ISM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	3277	0	203	0	3prime_fragment	FALSE	canonical	3	153	junction_8	20.0610638050861	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	NA	False	NA	0	True	ATTAAA	-17	NA	24803733	24797619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
Isoform_138781_49	chr5	-	1645	12	ISM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	3067	0	-7	0	3prime_fragment	FALSE	canonical	3	153	junction_8	20.0610638050861	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	NA	False	NA	0	True	ATTAAA	-17	NA	24803943	24797619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
Isoform_138782_48	chr5	-	1801	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	-67	1	-67	-1	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	6918	False	NA	-1	True	ATTAAA	-16	NA	24807077	24797620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
Isoform_138783_28	chr5	-	1932	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	-198	1	-198	-1	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	6787	False	NA	-1	True	ATTAAA	-16	NA	24807208	24797620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
Isoform_138784_17	chr5	-	1988	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	-253	0	-253	0	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	6732	False	NA	0	True	ATTAAA	-17	NA	24807263	24797619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
Isoform_138789_16	chr5	-	1708	14	FSM	ENSMUSG00000028949.14	ENSMUST00000195943.2	1712	14	4	0	4	0	multi-exon	FALSE	canonical	3	4	junction_12	70.4408770513493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	646	False	NA	0	True	ATTAAA	-17	NA	24829405	24797619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521_24827667_24829345
Isoform_138791_19	chr5	-	1757	6	FSM	ENSMUSG00000055235.12	ENSMUST00000068693.12	2364	6	80	527	33	0	multi-exon	FALSE	canonical	3	12	junction_3	2.85657137141714	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTTTGGTTTTCTTTT	NA	False	NA	-1	True	AATACA	-18	NA	24935645	24917262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24917750_24917847_24917952_24920523_24920660_24922964_24923386_24927632_24927775_24935178
Isoform_138792_3	chr5	-	2283	6	FSM	ENSMUSG00000055235.12	ENSMUST00000068693.12	2364	6	78	3	31	-3	multi-exon	FALSE	canonical	3	12	junction_3	2.85657137141714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGCCAGGATTTCTCT	NA	False	NA	NA	False	NA	NA	NA	24935647	24916738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24917750_24917847_24917952_24920523_24920660_24922964_24923386_24927632_24927775_24935178
Isoform_138793_4	chr5	-	357	2	NNC	ENSMUSG00000038135.5	novel	221	2	NA	NA	-748	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGCGGGCCTCGGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	24957070	24955999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_24956188_24956901
Isoform_138797_824	chr5	-	1127	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	229	428	33	416	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTTGAGCTACTTGG	NA	False	NA	-11	True	AATAAA	-15	NA	25047393	25008248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
Isoform_138798_770	chr5	-	1246	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	111	427	-85	417	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTGAGCTACTTGGT	NA	False	NA	-10	True	AATAAA	-16	NA	25047511	25008247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
Isoform_138803_105	chr5	-	2188	12	FSM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	19	-2	0	2	multi-exon	FALSE	canonical	3	116	junction_1	21.3386701313649	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTTATGTATATGAGT	NA	False	NA	-7	True	AATAAA	-21	NA	25113448	25067743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
Isoform_138804_27	chr5	-	2207	12	FSM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	-5	3	-5	-3	multi-exon	FALSE	canonical	3	116	junction_1	21.3386701313649	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAAAGTTTTTATGTATA	NA	False	NA	-12	True	AATAAA	-16	NA	25113472	25067748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
Isoform_138807_4	chr5	-	3480	16	FSM	ENSMUSG00000028944.15	ENSMUST00000030784.14	3331	16	-153	4	-153	0	multi-exon	FALSE	canonical	3	8	junction_12	63.6806616381038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTTTATGTATATGA	NA	False	NA	-9	True	AATAAA	-19	NA	25305793	25067745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
Isoform_138810_31	chr5	-	2192	12	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	87302	-2	-1	2	3prime_fragment	FALSE	canonical	3	39	junction_11	38.9905688956947	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTTATGTATATGAGT	NA	False	NA	-7	True	AATAAA	-21	NA	25113449	25067743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320
Isoform_138814_3	chr5	-	1333	10	ISM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	11	6010	-6	497	5prime_fragment	FALSE	canonical	3	123	junction_9	18.3726850393609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCATGTGTGTGTGAT	NA	False	NA	NA	False	GATAAA	-10	NA	25113456	25073755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
Isoform_138816_3	chr5	-	2688	7	ISM	ENSMUSG00000038056.16	ENSMUST00000172556.8	6486	20	25321	-629	-1829	1	3prime_fragment	FALSE	canonical	3	48	junction_5	4.8904669170404	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTGCACTGTGTTCT	8144	False	NA	-3	True	AATAAA	-15	NA	25488227	25476794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101
Isoform_138819_3	chr5	-	4604	13	ISM	ENSMUSG00000038056.16	ENSMUST00000172556.8	6486	20	17687	-627	2516	-1	3prime_fragment	FALSE	canonical	3	33	junction_12	9.64473085852235	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGAATGTGCACTGTGTT	2932	False	NA	-5	True	AATAAA	-13	NA	25495861	25476796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706
Isoform_138821_4	chr5	-	2717	14	NNC	ENSMUSG00000038056.16	novel	5301	34	NA	NA	-5	32	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	4.46153846153846	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTTTCTCCTGGT	9411	False	NA	NA	False	NA	NA	NA	25703786	25577801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620025_25648817_25648907_25703387
Isoform_138822_197	chr5	-	3227	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	14	6	14	-6	multi-exon	FALSE	canonical	3	77	junction_1	2.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCTATATTTCAT	NA	False	NA	-18	True	AATACA	-5	NA	25910809	25894815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_25897827_25903248_25903331_25910675
Isoform_138823_10	chr5	-	3347	4	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	31.8852107828483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTCTATATTTCATA	NA	False	NA	-17	True	AATACA	-6	NA	25910812	25894814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_25897827_25903248_25903331_25908295_25908412_25910675
Isoform_138824_4	chr5	-	3338	4	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	32.9679979508749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACATTTCTATATTTCA	NA	False	NA	-19	True	AATACA	-4	NA	25910809	25894816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_25897827_25903248_25903331_25908295_25908408_25910675
Isoform_138825_11	chr5	-	3740	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-15	-1971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.542771021642	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996408	27947048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_27947502_27949111_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
Isoform_138828_22	chr5	-	5355	20	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	-1970	intron_retention	FALSE	canonical	3	600	junction_13	74.9808470465806	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996412	27947047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
Isoform_138829_12	chr5	-	2785	11	ISM	ENSMUSG00000002221.12	ENSMUST00000002291.12	5850	21	135	18851	-20	801	5prime_fragment	FALSE	canonical	3	600	junction_4	48.4730853154614	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTGGCTTTGCCTCTA	NA	False	NA	NA	False	NA	NA	NA	27996413	27963928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
Isoform_138831_6	chr5	-	3268	10	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-20	803	intron_retention	FALSE	canonical	3	600	junction_3	51.0881590977792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGCTTTGCCTCTATT	NA	False	NA	NA	False	NA	NA	NA	27996413	27963926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
Isoform_138833_104	chr5	-	3522	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	83	-1621	83	-9	multi-exon	FALSE	canonical	3	175	junction_1	2	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTAAGAGACCAGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	28414937	28405825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_28408435_28412284_28412382_28414121
Isoform_138846_6	chr5	-	3504	2	FSM	ENSMUSG00000044681.20	ENSMUST00000117098.2	2661	2	216	-1059	70	751	multi-exon	FALSE	canonical	3	179	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTACTGGATATTTAT	NA	False	NA	NA	False	NA	NA	NA	28414950	28409706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_28412382_28414121
Isoform_138847_3	chr5	-	3015	18	NNC	ENSMUSG00000010721.16	novel	3422	18	NA	NA	25	145	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	15.0406600017153	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGAATTTAGTTTCT	NA	False	NA	0	True	AGTAAA	-15	NA	29583357	29436971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29569918_29570205_29583124
Isoform_138848_21	chr5	-	2755	17	FSM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	-4	2175	2	142	multi-exon	FALSE	canonical	3	26	junction_2	11.2080816266656	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTGTTGAATTTAGTT	NA	False	NA	-3	True	AGTAAA	-12	NA	29583386	29436974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
Isoform_138851_3	chr5	-	2187	9	ISM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	-5	56356	1	-28081	5prime_fragment	FALSE	canonical	3	35	junction_4	8.10863737011343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATT	NA	False	NA	NA	False	NA	NA	NA	29583387	29491155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
Isoform_138852_11	chr5	-	2097	3	FSM	ENSMUSG00000001566.10	ENSMUST00000165512.4	2245	3	-141	289	-141	-62	multi-exon	FALSE	canonical	2	3	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGCTAAATTATTATTT	NA	False	NA	NA	False	TATAAA	-19	NA	29683609	29678320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_29679230_29679753_29679915_29682582
Isoform_138853_5	chr5	-	2196	3	FSM	ENSMUSG00000001566.10	ENSMUST00000165512.4	2245	3	-165	214	-165	13	multi-exon	FALSE	canonical	2	3	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGAGTGAGGGGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	29683633	29678245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_29679230_29679753_29679915_29682582
Isoform_138856_71	chr5	-	2566	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	14	583	11	-583	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGCTATTCTATCTC	NA	False	NA	-2	True	NA	NA	NA	30278601	30264407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_138857_14	chr5	-	3809	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-18	-628	-18	3	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30278633	30263196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_138859_914	chr5	-	989	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	4	2170	1	67	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTTTCAGTGATGCTA	NA	False	NA	-22	True	ATTAAA	-18	NA	30278611	30265994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_138860_115	chr5	-	1180	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-8	1991	-8	246	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCAATGGGCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	30278623	30265815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_138863_26	chr5	-	982	7	NIC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	-10	67	combination_of_known_junctions	FALSE	canonical	3	80	junction_2	658.000105538661	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTTTCAGTGATGCTA	NA	False	NA	-22	True	ATTAAA	-18	NA	30278594	30265994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_30266132_30266965_30267048_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_138864_20	chr5	-	1986	3	NNC	ENSMUSG00000025747.13	novel	2723	7	NA	NA	-10	-2035	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	937	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGTGCAGGCAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30278594	30274923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_30274984_30275015_30276706_30278358
Isoform_138881_1185	chr5	-	2709	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	185	1123	-1	-1	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGTTTTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	30359975	30324424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
Isoform_138882_214	chr5	-	2744	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	151	1122	-21	0	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGCCTGTTTTCTTCT	NA	False	NA	-3	True	AATAAA	-23	NA	30360009	30324423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
Isoform_138883_57	chr5	-	2875	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	17	1125	17	-3	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGACTGGCCTGTTTTCT	NA	False	NA	-6	True	AATAAA	-20	NA	30360143	30324426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
Isoform_138892_4	chr5	-	1729	6	ISM	ENSMUSG00000067642.12	ENSMUST00000088117.11	3099	14	7299	1	-2005	-1	3prime_fragment	FALSE	canonical	0	0	junction_4	2.60768096208106	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGAGGTCATTTACTA	4665	False	NA	NA	False	AATAAA	-19	NA	30403421	30398429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_30398560_30400040_30400097_30400494_30400558_30400647_30400690_30401236_30402614_30403360
Isoform_138894_37	chr5	-	558	2	FSM	ENSMUSG00000038803.8	ENSMUST00000132034.5	576	2	12	6	12	-6	multi-exon	FALSE	canonical	3	1088	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATATATTTTTTTGTGGT	NA	False	NA	-11	True	NA	NA	NA	31065057	31063867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31064111_31064742
Isoform_138897_45	chr5	-	507	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	2	635	2	-2	multi-exon	FALSE	canonical	3	823	junction_2	132.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTTTTGTGGTCCCA	NA	False	NA	-7	True	NA	NA	NA	31065130	31063863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31064111_31064742_31064881_31065008
Isoform_138898_223	chr5	-	435	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	75	634	12	-1	multi-exon	FALSE	canonical	3	823	junction_2	132.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTTTGTGGTCCCAA	NA	False	NA	-6	True	NA	NA	NA	31065057	31063862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31064111_31064742_31064881_31065008
Isoform_138899_38	chr5	-	1426	6	FSM	ENSMUSG00000029161.9	ENSMUST00000031051.9	1442	6	16	0	16	0	multi-exon	FALSE	canonical	3	13	junction_4	4.51663591625449	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTTGGTCCAG	5312	False	NA	1	True	AATAAA	-25	NA	31102919	31090486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093325_31102701
Isoform_138901_3	chr5	-	1456	6	NNC	ENSMUSG00000029161.9	novel	1442	6	NA	NA	61	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.15204895091804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTCCTTGGTCCAGC	5357	False	NA	2	True	AATAAA	-26	NA	31102874	31090485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_31091333_31091503_31091678_31091700_31091794_31091886_31091953_31093221_31093325_31102701
Isoform_138908_558	chr5	-	2012	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	99	4189	0	1	multi-exon	TRUE	canonical	3	205	junction_7	28.1735691739616	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	-7	True	AATAAA	-22	NA	31117606	31112385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
Isoform_138909_165	chr5	-	2050	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	61	4189	-20	1	multi-exon	FALSE	canonical	3	205	junction_7	28.1735691739616	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	-7	True	AATAAA	-22	NA	31117644	31112385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
Isoform_138913_42	chr5	-	2335	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	-20	0	intron_retention	FALSE	canonical	3	234	junction_6	22.518926280272	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117644	31112386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
Isoform_138914_79	chr5	-	2286	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	234	junction_6	22.518926280272	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCAGCAGTCCTCTTGT	NA	False	NA	-9	True	AATAAA	-20	NA	31117596	31112387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
Isoform_138919_244	chr5	-	3082	18	NIC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	63	junction_17	22.1293773649543	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	810	False	NA	-1	True	AATAAA	-19	NA	31205346	31193379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
Isoform_138920_23	chr5	-	2643	18	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	17	353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	32.3827670006119	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGTGGCATTTGATTAA	750	False	NA	NA	False	AATAAA	-15	NA	31205406	31193877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205143_31205309
Isoform_138921_29	chr5	-	3093	18	FSM	ENSMUSG00000006641.13	ENSMUST00000114668.7	3436	18	343	0	-140	0	multi-exon	FALSE	canonical	3	19	junction_17	28.8754634169437	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	593	False	NA	-1	True	AATAAA	-19	NA	31205563	31193379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205515
Isoform_138922_6	chr5	-	3435	18	NNC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	32.3827670006119	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	250	False	NA	-1	True	AATAAA	-19	NA	31205906	31193379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205143_31205515
Isoform_138924_23	chr5	-	3223	18	FSM	ENSMUSG00000006641.13	ENSMUST00000080431.8	3218	18	-5	0	-5	0	multi-exon	FALSE	canonical	2	5	junction_17	31.4360998487793	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	NA	False	NA	-1	True	AATAAA	-19	NA	31206273	31193379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31206095
Isoform_138925_5	chr5	-	2744	18	FSM	ENSMUSG00000006641.13	ENSMUST00000080431.8	3218	18	-28	502	-28	349	multi-exon	FALSE	canonical	2	5	junction_17	31.4360998487793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGGGTGGCATTTGA	NA	False	NA	NA	False	AATAAA	-11	NA	31206296	31193881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31206095
Isoform_138926_54	chr5	-	1991	8	FSM	ENSMUSG00000029151.15	ENSMUST00000031037.14	2089	8	98	0	-48	0	multi-exon	FALSE	canonical	3	15	junction_5	6.02037357305871	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCAGTCCAATTCCTC	3842	False	NA	0	True	AATAAA	-19	NA	31250861	31243449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31244263_31245300_31245436_31245648_31245755_31245951_31246151_31246662_31246817_31246897_31247045_31247399_31247582_31250606
Isoform_138928_18	chr5	-	1694	8	FSM	ENSMUSG00000107283.4	ENSMUST00000202241.4	903	8	-1	-790	-1	-5	multi-exon	FALSE	canonical	3	21	junction_2	130.575335984048	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAACAAGAATTGTGT	NA	False	NA	NA	False	NA	NA	NA	31311573	31298011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31299195_31302043_31302097_31302583_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
Isoform_138933_11	chr5	-	1755	8	FSM	ENSMUSG00000107283.4	ENSMUST00000200864.4	878	8	-6	-871	-5	-7	multi-exon	FALSE	canonical	3	9	junction_7	132.664376283514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCAAACAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	31311542	31298013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311434
Isoform_138936_237	chr5	-	1676	8	FSM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	32	16	-1	-7	multi-exon	FALSE	canonical	3	233	junction_7	57.209960599853	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCAAACAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	31311563	31298013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
Isoform_138941_10	chr5	-	1663	7	FSM	ENSMUSG00000107283.4	ENSMUST00000200744.4	1653	7	-15	5	-9	-5	multi-exon	FALSE	canonical	3	7	junction_2	140.104722737434	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAACAAGAATTGTGT	NA	False	NA	NA	False	NA	NA	NA	31311581	31298011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31299195_31302043_31302097_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
Isoform_138949_140	chr5	-	3238	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	232	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337252	31314555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
Isoform_138953_56	chr5	-	4445	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	3	165	junction_17	146.210507369935	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337253	31313349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
Isoform_138974_299	chr5	-	3113	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	236	1203	1	236	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTGGGTGTTTGGA	NA	False	NA	0	True	AGTAAA	-24	NA	31337252	31314551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
Isoform_138978_36	chr5	-	3348	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	1	1203	1	236	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTGGGTGTTTGGA	NA	False	NA	0	True	AGTAAA	-24	NA	31337487	31314551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
Isoform_138979_117	chr5	-	4316	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	236	0	1	0	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337252	31313348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
Isoform_138983_15	chr5	-	4549	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	2	1	2	-1	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337486	31313349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
Isoform_1390_1885	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1885	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV8002_+_0_8000
Isoform_139003_39	chr5	-	1986	12	FSM	ENSMUSG00000029145.13	ENSMUST00000114603.8	1966	12	-20	0	-20	0	multi-exon	FALSE	canonical	3	556	junction_3	55.8517814183514	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350378	31344911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925
Isoform_139004_59	chr5	-	1681	12	FSM	ENSMUSG00000029145.13	ENSMUST00000114603.8	1966	12	285	0	270	0	multi-exon	FALSE	canonical	3	556	junction_3	55.8517814183514	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350073	31344911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925
Isoform_139007_558	chr5	-	1696	13	FSM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	319	10	28	0	multi-exon	FALSE	canonical	3	556	junction_3	56.1372326436643	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350455	31344911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
Isoform_139010_35	chr5	-	1764	13	FSM	ENSMUSG00000029145.13	ENSMUST00000166769.8	1878	13	105	9	-20	0	multi-exon	FALSE	canonical	3	32	junction_12	174.191864205983	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350378	31344911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31350115_31350336
Isoform_139012_6	chr5	-	1913	5	NIC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	81.704880515181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359600	31356324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_31357492_31357578_31357728_31357995_31358167_31358926_31359083_31359330
Isoform_139013_7	chr5	-	1904	5	NIC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	78.2476037971771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTCTCTGCTGAATT	NA	False	NA	-18	True	AATAAA	-15	NA	31359589	31356325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_31357492_31357578_31357731_31357995_31358167_31358926_31359083_31359330
Isoform_139014_18	chr5	-	2112	3	FSM	ENSMUSG00000043059.17	ENSMUST00000031562.11	2213	3	103	-2	103	0	multi-exon	FALSE	canonical	3	184	junction_2	7	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359283	31356324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31357492_31357578_31358167_31358926
Isoform_139015_8	chr5	-	2456	3	FSM	ENSMUSG00000043059.17	ENSMUST00000031562.11	2213	3	-242	-1	19	-1	multi-exon	FALSE	canonical	3	184	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTCTCTGCTGAATT	NA	False	NA	-18	True	AATAAA	-15	NA	31359628	31356325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31357492_31357578_31358167_31358926
Isoform_139018_330	chr5	-	2180	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	48	0	-30	0	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359599	31356324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
Isoform_139019_86	chr5	-	2209	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	19	0	19	0	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359628	31356324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
Isoform_139021_10	chr5	-	5543	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	44	-3359	-34	3359	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAGCGGTACAGTAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	31359603	31352965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
Isoform_139022_8	chr5	-	1948	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-9	0	intron_retention	FALSE	canonical	3	16	junction_3	82.6935440177903	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359656	31356324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_31357492_31357578_31358167_31358926_31359083_31359619
Isoform_139035_2447	chr5	-	2214	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	92	1	-30	-1	multi-exon	FALSE	canonical	3	595	junction_8	38.6382398699386	2447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGCTCATAGTGTCCTG	NA	False	NA	-6	True	ACTAAA	-17	NA	31377939	31360012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
Isoform_139036_210	chr5	-	2272	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	39	-4	39	0	multi-exon	FALSE	canonical	3	595	junction_8	38.6382398699386	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATAGTGTCCTGCTTTA	NA	False	NA	-1	True	ACTAAA	-22	NA	31377992	31360007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
Isoform_139043_104	chr5	-	5405	48	FSM	ENSMUSG00000038564.12	ENSMUST00000041565.11	5403	48	-6	4	3	-1	multi-exon	TRUE	canonical	3	41	junction_37	14.3941162971073	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCTGCATTCTTTGC	NA	False	NA	-3	True	ATTAAA	-16	NA	31448457	31410624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
Isoform_139045_9	chr5	-	1424	8	FSM	ENSMUSG00000038552.15	ENSMUST00000041266.11	1375	8	-49	0	16	0	multi-exon	FALSE	canonical	2	3	junction_1	7.19977323905952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGACTGGTTCCTGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	31453264	31450229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31450509_31450757_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
Isoform_139046_11	chr5	-	2320	7	FSM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	1	12	1	-12	multi-exon	FALSE	canonical	3	9	junction_5	5.32290647422377	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTATAATTTGAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	31453279	31449597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
Isoform_139049_103	chr5	-	1297	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1201	2	intron_retention	FALSE	canonical	3	124	junction_1	0	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	721	False	NA	0	True	NA	NA	NA	31646493	31643974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_31645206_31646427
Isoform_139051_108	chr5	-	2628	5	FSM	ENSMUSG00000053134.14	ENSMUST00000065388.11	2693	5	52	13	10	-7	multi-exon	FALSE	canonical	3	72	junction_3	3.34477204006491	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCATCTGAGTTATTC	NA	False	NA	-8	True	AATAAA	-12	NA	31684065	31671920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680606_31683958
Isoform_139055_17	chr5	-	1023	8	FSM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	12	7	12	-7	multi-exon	FALSE	canonical	3	28	junction_1	7.57816411992848	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCACATGGGTGTGGCT	NA	False	NA	-38	True	AATAAA	-16	NA	31854959	31781789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_31782001_31805064_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
Isoform_139060_8	chr5	-	2315	9	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	2	32	junction_5	306.610909786328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32942959	32893647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32897967_32898134_32922116_32922293_32931739_32931811_32942892
Isoform_139067_6	chr5	-	2082	7	FSM	ENSMUSG00000023452.20	ENSMUST00000142957.6	2084	7	15	-13	2	0	multi-exon	FALSE	canonical	3	16	junction_6	252.221904062452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTACCGTAGCTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	32942968	32893652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32942892
Isoform_139076_3	chr5	-	9999	11	FSM	ENSMUSG00000054280.15	ENSMUST00000120129.9	9959	11	-45	5	-45	-5	multi-exon	FALSE	canonical	3	28	junction_10	39.1414102965133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7008	False	NA	0	True	AATAAA	-21	NA	33011645	32947168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011436
Isoform_139078_34	chr5	-	9826	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	7	-9	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATAATTGTCAAGGCT	7060	False	NA	-4	True	AATAAA	-17	NA	33011593	32947172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
Isoform_139079_4	chr5	-	9887	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-50	-5	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7003	False	NA	0	True	AATAAA	-21	NA	33011650	32947168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
Isoform_139081_8	chr5	-	9308	9	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	7	-6	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	40.2670771226321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAATTGTCAAGGCTATT	7060	False	NA	-1	True	AATAAA	-20	NA	33011593	32947169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33011436
Isoform_139092_4	chr5	-	1769	6	FSM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	270	6	0	1	multi-exon	FALSE	canonical	1	2	junction_2	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTCAGAGGGTGACCT	NA	False	NA	NA	False	AATAAA	-15	NA	33375529	33371276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33371997_33372892_33373068_33373676_33373869_33373940_33374165_33374587_33374808_33375291
Isoform_139094_626	chr5	-	2466	10	FSM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	1	-31	1	0	multi-exon	FALSE	canonical	3	226	junction_1	199.225041809384	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432335	33405066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
Isoform_139101_99	chr5	-	2271	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	298.867759218019	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCCTGGCACCAGTTTT	NA	False	NA	-17	True	AATAAA	-18	NA	33432336	33405069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
Isoform_139114_1621	chr5	-	2466	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	693	junction_8	73.9275588033129	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCCTGGCACCAGTTTT	NA	False	NA	-17	True	AATAAA	-18	NA	33432335	33405069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
Isoform_139115_69	chr5	-	2597	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-125	0	combination_of_known_junctions	FALSE	canonical	3	693	junction_8	73.9275588033129	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432463	33405066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
Isoform_139121_352	chr5	-	2277	9	FSM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	2	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	242.929741643546	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432336	33405066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
Isoform_139128_42	chr5	-	3125	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	693	junction_7	78.351372036487	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432335	33405066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33406031_33406450_33406569_33406930_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
Isoform_139135_58	chr5	-	2125	7	FSM	ENSMUSG00000037339.18	ENSMUST00000150033.8	2112	7	-11	-2	0	2	multi-exon	FALSE	canonical	3	30	junction_2	74.8793473974411	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786943	33757697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33758225_33764807_33765572_33765674_33765834_33767775_33767831_33771946_33772179_33786196_33786322_33786680
Isoform_139136_21	chr5	-	2166	7	FSM	ENSMUSG00000037339.18	ENSMUST00000150033.8	2112	7	-53	-1	-6	1	multi-exon	FALSE	canonical	3	30	junction_2	74.8793473974411	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTCTGCCTAGATTCTT	NA	False	NA	-11	True	ATTAAA	-15	NA	33786985	33757698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33758225_33764807_33765572_33765674_33765834_33767775_33767831_33771946_33772179_33786196_33786322_33786680
Isoform_139139_38	chr5	-	1970	6	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	70.7937850379537	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786943	33757697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786192_33786322_33786680
Isoform_139140_35	chr5	-	2345	5	FSM	ENSMUSG00000037339.18	ENSMUST00000045329.10	2346	5	4	-3	4	3	multi-exon	FALSE	canonical	3	127	junction_2	24.5089269450949	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786962	33757696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196
Isoform_139141_527	chr5	-	1967	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	36	6	0	3	multi-exon	FALSE	canonical	3	127	junction_2	26.6187903556867	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786943	33757696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
Isoform_139146_23	chr5	-	1841	5	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	70.1248885917119	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786943	33757697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786680
Isoform_139147_13	chr5	-	1911	5	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	81.3956387038028	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786942	33757696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33758225_33764807_33765572_33771946_33772179_33786196_33786322_33786680
Isoform_139149_31	chr5	-	1203	5	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	76.423164027669	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786943	33757696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33758225_33767775_33767831_33771946_33772179_33786196_33786322_33786680
Isoform_139158_873	chr5	-	1647	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	256	3	-12	-3	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTGCCCTATACTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	33809662	33797401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
Isoform_139159_484	chr5	-	1681	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	224	1	3	-1	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCCTATACTGTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	33809694	33797399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
Isoform_13916_3254	chr11	-	2362	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-49	0	-49	0	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	3254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8481	False	NA	-5	True	AATAAA	-17	NA	69572721	69563940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
Isoform_139160_22	chr5	-	1909	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	-7	4	-7	-4	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATTGCCCTATACTGT	NA	False	NA	-8	True	AATAAA	-18	NA	33809925	33797402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
Isoform_139162_41	chr5	-	1542	7	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	-12	-3	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	419.837270062263	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTGCCCTATACTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	33809662	33797401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33809306_33809424_33809538
Isoform_139164_16	chr5	-	2020	7	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	1123	junction_4	42.0254552490379	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGCCCTATACTGTTT	NA	False	NA	-6	True	AATAAA	-20	NA	33809662	33797400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33803414_33807086_33807192_33809306_33809424_33809538
Isoform_139168_10	chr5	-	4144	3	ISM	ENSMUSG00000019295.9	ENSMUST00000140931.2	2369	4	-13	2	-13	-2	intron_retention	FALSE	canonical	3	62	junction_2	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTACTTCATTTTGT	NA	False	NA	-4	True	AATAAA	-14	NA	33815256	33810564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_33811959_33812056_33812217_33812666
Isoform_139169_18	chr5	-	2659	4	NIC	ENSMUSG00000019295.9	novel	2369	4	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	28.5773803324704	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTACTTCATTTTGT	NA	False	NA	-4	True	AATAAA	-14	NA	33815245	33810564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33811959_33812056_33812217_33812666_33813142_33814615
Isoform_139171_5	chr5	-	3186	4	NIC	ENSMUSG00000019295.9	novel	2828	4	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	28.5773803324704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTACTTCATTTTGTT	NA	False	NA	-3	True	AATAAA	-15	NA	33815771	33810563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_33811959_33812056_33812217_33812666_33813142_33814615
Isoform_139173_18	chr5	-	2388	4	FSM	ENSMUSG00000019295.9	ENSMUST00000140931.2	2369	4	-20	1	-20	-1	multi-exon	FALSE	canonical	1	1	junction_3	31.3793987620328	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTACTTCATTTTGTT	NA	False	NA	-3	True	AATAAA	-15	NA	33815263	33810563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814905
Isoform_139174_202	chr5	-	2329	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	497	2	-20	1	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTACTTCATTTTGTTTA	NA	False	NA	-1	True	AATAAA	-17	NA	33815263	33810561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
Isoform_139175_7	chr5	-	2828	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	-5	5	-5	-2	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTACTTCATTTTGT	NA	False	NA	-4	True	AATAAA	-14	NA	33815765	33810564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
Isoform_13918_226	chr11	-	2467	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-154	0	84	0	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8376	False	NA	-5	True	AATAAA	-17	NA	69572826	69563940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
Isoform_139184_1005	chr5	-	2525	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	101	2646	-2	215	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATTTTTAATTTTCAT	NA	False	NA	NA	False	AATAAA	-19	NA	33940060	33899662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
Isoform_139185_77	chr5	-	2596	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	31	2645	31	216	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATTTTTAATTTTCATC	NA	False	NA	NA	False	AATAAA	-20	NA	33940130	33899661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
Isoform_139188_16	chr5	-	5166	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	101	5	-2	-5	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTGTACAGTGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	33940060	33897021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
Isoform_139199_80	chr5	-	2411	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	164	5	1	-5	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACGATTTTCCACTTTAA	NA	False	NA	-5	True	AATAAA	-24	NA	34093593	34055264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
Isoform_139206_67	chr5	-	2451	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	123	6	-40	-6	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACGATTTTCCACTTTA	NA	False	NA	-6	True	AATAAA	-23	NA	34093634	34055265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
Isoform_139214_50	chr5	-	2920	4	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	88	11	-6	-11	intron_retention	FALSE	canonical	3	453	junction_3	32.3144274623924	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACTATGCCTGCTGTG	9414	False	NA	-11	True	AATAAA	-40	NA	34326783	34311234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748
Isoform_139219_11	chr5	-	2057	6	NIC	ENSMUSG00000079555.3	novel	2073	5	NA	NA	-7	-13	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	227.84327947078	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTACTATGCCTGCTG	9413	False	NA	-13	True	AATAAA	-38	NA	34326784	34311236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326114_34326199_34326733
Isoform_139220_578	chr5	-	1965	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	88	20	-6	-20	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGGAATATTTACTATG	9414	False	NA	-20	True	AATAAA	-31	NA	34326783	34311243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
Isoform_139221_22	chr5	-	2058	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	-1	16	-1	-16	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAATATTTACTATGCCTG	9953	False	NA	-16	True	AATAAA	-35	NA	34326872	34311239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
Isoform_139226_6	chr5	-	1110	6	FSM	ENSMUSG00000037235.14	ENSMUST00000042701.13	3872	6	-22	2784	-12	-92	multi-exon	FALSE	canonical	1	1	junction_1	2.57681974534503	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCGGCAGGATCCGTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	34345076	34334014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34334494_34334941_34335105_34336153_34336269_34341657_34341688_34344672_34344773_34344853
Isoform_139227_19	chr5	-	4090	13	FSM	ENSMUSG00000037224.16	ENSMUST00000094868.10	3983	13	-110	3	1	-3	multi-exon	FALSE	canonical	2	8	junction_2	9.95685135416256	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACACGCTCTGGCGTCTTC	NA	False	NA	-5	True	CATAAA	-15	NA	34445780	34352239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34353445_34353920_34354025_34354825_34354931_34356122_34356240_34356936_34357089_34373904_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
Isoform_13923_203	chr11	-	2216	11	FSM	ENSMUSG00000005204.13	ENSMUST00000066760.8	2219	11	9	-6	9	0	multi-exon	FALSE	canonical	3	37	junction_10	281.644616493907	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8301	False	NA	-5	True	AATAAA	-17	NA	69572901	69563940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
Isoform_139230_214	chr5	-	1998	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	-4	-7	-4	7	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGGCTGGAATGTGTG	NA	False	NA	-3	True	AATAAA	-26	NA	34671339	34653423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
Isoform_139231_5	chr5	-	2856	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	1	-870	1	870	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAAAAAATACAA	NA	False	NA	NA	False	AATAAA	-16	NA	34671334	34652560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
Isoform_139233_47	chr5	-	2177	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	117	junction_4	10.0623058987491	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTGAGAGCTGGGCTG	NA	False	NA	-12	True	AATAAA	-17	NA	34671339	34653432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_34654295_34656523_34657081_34658251_34658342_34660880_34661172_34670962
Isoform_139234_3	chr5	-	4691	4	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	117	junction_3	5.31245915016974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTGAGAGCTGGGCTG	NA	False	NA	-12	True	AATAAA	-17	NA	34671314	34653432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_34654295_34656523_34657081_34658251_34661172_34670962
Isoform_139235_6	chr5	-	3668	2	FSM	ENSMUSG00000059866.14	ENSMUST00000159102.2	584	2	-325	-2759	6	645	multi-exon	FALSE	canonical	3	117	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTG	NA	False	NA	NA	False	NA	NA	NA	34671329	34657870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34661172_34670962
Isoform_139236_9	chr5	-	1524	11	ISM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	608	1	-49	-1	3prime_fragment	FALSE	canonical	3	347	junction_7	33.037705731482	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGCCTTTCCGTCTTAC	NA	False	NA	-8	True	AATAAA	-16	NA	34793928	34790993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753
Isoform_139242_291	chr5	-	1853	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	48	6	-1	0	multi-exon	FALSE	canonical	3	174	junction_12	65.1670929227321	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTTCCGTCTTACTA	NA	False	NA	-6	True	AATAAA	-18	NA	34794485	34790991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
Isoform_139243_58	chr5	-	1895	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	8	4	8	0	multi-exon	FALSE	canonical	3	174	junction_12	65.1670929227321	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	-4	True	AATAAA	-20	NA	34794525	34790989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
Isoform_139244_30	chr5	-	1723	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114331.10	1754	13	32	-1	9	1	multi-exon	TRUE	canonical	3	36	junction_12	99.4937183946806	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794524	34790988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
Isoform_139245_98	chr5	-	1850	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	57	-1	5	0	multi-exon	FALSE	canonical	3	69	junction_12	91.0092715057098	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTTCCGTCTTACTA	NA	False	NA	-6	True	AATAAA	-18	NA	34794479	34790991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
Isoform_139247_26	chr5	-	1699	13	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_12	101.567164422804	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794501	34790992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794442
Isoform_139249_8	chr5	-	1926	13	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_12	108.08185555402	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTTCCGTCTTACTAT	NA	False	NA	-5	True	AATAAA	-19	NA	34794515	34790990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794170_34794270
Isoform_139250_19	chr5	-	2024	12	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-18	1	intron_retention	FALSE	canonical	3	174	junction_11	68.0427672998254	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794502	34790988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
Isoform_139253_8	chr5	-	2235	11	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	11	-1	intron_retention	FALSE	canonical	3	174	junction_10	71.3145146516472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCGTCTTACTATTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	34794458	34790986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792504_34792713_34792876_34792952_34793469_34793753_34793851_34793937_34794128_34794270
Isoform_139271_739	chr5	-	2650	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	52	0	52	0	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGTGGTGTGTT	NA	False	NA	-5	True	AATAAA	-16	NA	34817440	34795879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
Isoform_139272_449	chr5	-	2675	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	25	2	25	-2	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAAGGCTGTGTGGTGTG	NA	False	NA	-7	True	AATAAA	-14	NA	34817467	34795881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
Isoform_139290_744	chr5	-	2902	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	67	12	-3	-12	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCATTCTTTCTGGGGA	NA	False	NA	-19	True	AATAAA	-9	NA	35263043	35248856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
Isoform_139291_1776	chr5	-	1444	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	67	1470	-3	98	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTGGTATCTCGA	NA	False	NA	0	True	AATACA	-23	NA	35263043	35250314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
Isoform_139301_62	chr5	-	3789	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	0	1	0	-1	multi-exon	FALSE	canonical	3	72	junction_3	7.3	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATTTAATAGAAATATTTA	7626	False	NA	NA	False	TATAAA	-20	NA	35732414	35713547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
Isoform_139302_108	chr5	-	2785	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	0	1005	0	-1005	multi-exon	FALSE	canonical	3	72	junction_3	7.3	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCAAGGGCTTCACAGCA	7626	False	NA	-5	True	AATAAA	-16	NA	35732414	35714551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
Isoform_139306_11	chr5	-	3747	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	21.9474372080204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAATTTAATAGAAATATT	7637	False	NA	NA	False	TATAAA	-18	NA	35732403	35713549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35731902
Isoform_139307_12	chr5	-	2733	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	6	-1003	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	21.9474372080204	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCTTCACAGCATC	7651	False	NA	-3	True	AATAAA	-18	NA	35732389	35714549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35731902
Isoform_139309_4	chr5	-	2456	9	FSM	ENSMUSG00000029096.16	ENSMUST00000087629.10	2750	9	275	19	-35	-19	multi-exon	FALSE	canonical	1	1	junction_1	0.484122918275927	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCTGTCAACCAGAGAAG	NA	False	NA	NA	False	ATTAAA	-13	NA	35836851	35809385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_35810467_35811414_35811511_35812887_35812937_35821306_35821422_35822757_35822791_35823393_35823589_35825526_35825750_35828375_35828476_35836287
Isoform_139311_50	chr5	-	4301	18	FSM	ENSMUSG00000036553.17	ENSMUST00000070203.14	4549	18	246	2	-18	-1	multi-exon	FALSE	canonical	3	19	junction_17	20.7093914138867	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTATCTTCTAGGTG	NA	False	NA	-7	True	AGTAAA	-13	NA	35886374	35854525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35886290
Isoform_139313_96	chr5	-	4289	18	FSM	ENSMUSG00000036553.17	ENSMUST00000201511.2	4246	18	-45	2	-45	0	multi-exon	FALSE	canonical	3	51	junction_17	16.3400287573917	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCTGGTATCTTCTAG	NA	False	NA	-10	True	AGTAAA	-10	NA	35897376	35854528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
Isoform_139315_8	chr5	-	4282	18	NNC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	23.5018956755837	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCTGGTATCTTCTAG	NA	False	NA	-10	True	AGTAAA	-10	NA	35897300	35854528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897232
Isoform_139317_7	chr5	-	4226	17	NIC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	26.8048503073604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTATCTTCTAGGTG	NA	False	NA	-7	True	AGTAAA	-13	NA	35886374	35854525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35881257_35881489_35886290
Isoform_139318_12	chr5	-	4218	17	NIC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-46	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	23.5478236786332	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTATCTTCTAGGTG	NA	False	NA	-7	True	AGTAAA	-13	NA	35897377	35854525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35881257_35881489_35897301
Isoform_139319_5	chr5	-	4243	18	NIC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	23.9841354717084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897376	35854524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871456_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
Isoform_13932_63	chr11	-	2491	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-62	0	intron_retention	FALSE	canonical	3	762	junction_9	86.3109509095664	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8468	False	NA	-5	True	AATAAA	-17	NA	69572734	69563940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
Isoform_139320_3	chr5	-	5675	27	FSM	ENSMUSG00000029093.15	ENSMUST00000037370.14	5707	27	27	5	10	-5	multi-exon	FALSE	canonical	0	0	junction_26	3.95836317854419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCAACAGGGTCGGTC	NA	False	NA	NA	False	NA	NA	NA	36555441	36174528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36554909
Isoform_139321_4	chr5	-	5324	27	NNC	ENSMUSG00000029093.15	novel	5707	27	NA	NA	30847	-2	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_14	3.50907530090986	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAACAGGGTCGGTCTCT	3143	False	NA	NA	False	NA	NA	NA	36394976	36174525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36394798
Isoform_139322_192	chr5	-	3778	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	13	0	13	0	multi-exon	FALSE	canonical	3	130	junction_1	0	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTGTTTGCTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	36641616	36631013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36634307_36641131
Isoform_139328_77	chr5	-	3830	12	FSM	ENSMUSG00000029192.18	ENSMUST00000171385.8	3884	12	51	3	-24	0	multi-exon	FALSE	canonical	3	47	junction_11	14.7609043598508	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	8835	False	NA	-4	True	AATAAA	-18	NA	36687916	36647951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
Isoform_139330_17	chr5	-	4681	14	FSM	ENSMUSG00000029192.18	ENSMUST00000140607.8	4649	14	-33	1	-22	-1	multi-exon	FALSE	canonical	3	13	junction_13	26.7829319490414	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	9497	False	NA	-5	True	AATAAA	-17	NA	36739169	36647952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739030
Isoform_139331_58	chr5	-	4576	14	FSM	ENSMUSG00000029192.18	ENSMUST00000031094.15	4590	14	10	4	3	0	multi-exon	FALSE	canonical	3	20	junction_13	25.6258929704419	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	8935	False	NA	-4	True	AATAAA	-18	NA	36739731	36647951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739698
Isoform_139332_11	chr5	-	4897	16	NIC	ENSMUSG00000029192.18	novel	2765	15	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_15	32.7743802382288	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	NA	False	NA	-5	True	AATAAA	-17	NA	36750617	36647952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36742125_36742181_36749302_36749487_36750501
Isoform_139333_4	chr5	-	5154	16	NIC	ENSMUSG00000029192.18	novel	2765	15	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	33.0059927218612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	NA	False	NA	-4	True	AATAAA	-18	NA	36750671	36647951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36742125_36742181_36749302_36749689_36750501
Isoform_139335_3	chr5	-	3838	13	NIC	ENSMUSG00000029192.18	novel	4590	14	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	27.1779117830802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTATGTTCACTGTGTA	8928	False	NA	-7	True	AATAAA	-15	NA	36739738	36647954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36739698
Isoform_139340_72	chr5	-	6693	9	FSM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	-22	6	2	-6	multi-exon	FALSE	canonical	2	71	junction_5	5.18260311040697	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTTTGTTGTTTTT	NA	False	NA	39	True	AATAAA	-7	NA	36853303	36757834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
Isoform_139341_27	chr5	-	6738	9	FSM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	-66	5	21	-5	multi-exon	FALSE	canonical	2	71	junction_5	5.18260311040697	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTTTGTTGTTTTTA	NA	False	NA	40	True	AATAAA	-8	NA	36853347	36757833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
Isoform_139342_5	chr5	-	6605	8	NIC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	24.0882730381234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTTTGTTGTTTTT	NA	False	NA	39	True	AATAAA	-7	NA	36853313	36757834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_36760148_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
Isoform_139343_5	chr5	-	1941	2	FSM	ENSMUSG00000029190.20	ENSMUST00000140653.2	2014	2	70	3	7	-3	multi-exon	FALSE	canonical	2	76	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATTTGTATTATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	36853298	36828745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36830587_36853198
Isoform_139344_3303	chr5	-	1530	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	68	50	68	-50	multi-exon	FALSE	canonical	3	1678	junction_1	0	3303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCAGCCCGGAGAGTT	NA	False	NA	-9	True	AATAAA	-18	NA	36954048	36952260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36953289_36953546
Isoform_139348_134	chr5	-	1604	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	-6	50	-6	-50	multi-exon	FALSE	canonical	3	1678	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCAGCCCGGAGAGTT	NA	False	NA	-9	True	AATAAA	-18	NA	36954122	36952260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36953289_36953546
Isoform_139357_15	chr5	-	1572	8	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	15976	-13	-1714	13	3prime_fragment	FALSE	canonical	3	157	junction_7	33.0448056988306	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGACCTCTCTTTTCAC	NA	False	NA	0	True	AATAAA	-34	NA	36972021	36964251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672
Isoform_139363_334	chr5	-	3321	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	22	-13	22	13	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGACCTCTCTTTTCAC	971	False	NA	0	True	AATAAA	-34	NA	36987975	36964251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
Isoform_139367_29	chr5	-	3648	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	22	-340	22	340	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCAATCTGGCCT	971	False	NA	-10	True	AATACA	-26	NA	36987975	36963924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
Isoform_139373_9	chr5	-	3866	18	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	52	13	intron_retention	FALSE	canonical	3	157	junction_6	23.7661618657071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGACCTCTCTTTTCAC	1001	False	NA	0	True	AATAAA	-34	NA	36987945	36964251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
Isoform_139377_419	chr5	-	3511	8	FSM	ENSMUSG00000039474.14	ENSMUST00000043964.13	3787	8	274	2	2	1	multi-exon	FALSE	canonical	3	110	junction_7	10.259888211986	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGCCTTCTGGTTTG	NA	False	NA	-1	True	AATAAA	-16	NA	37146275	37123449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
Isoform_139378_14	chr5	-	3683	9	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-40	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	53.8468604005842	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGCCTTCTGGTTTG	NA	False	NA	-1	True	AATAAA	-16	NA	37146317	37123449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_37126023_37126736_37126867_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
Isoform_139379_6	chr5	-	6398	7	NIC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-6	1	intron_retention	FALSE	canonical	3	110	junction_6	10.6614570611463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGCCTTCTGGTTTG	NA	False	NA	-1	True	AATAAA	-16	NA	37146283	37123449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
Isoform_139381_9	chr5	-	4329	21	NIC	ENSMUSG00000029122.12	novel	4325	21	NA	NA	-46	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.16977917211909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTGTTCTTGCCTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	37494284	37456517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_37457806_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
Isoform_139383_4	chr5	-	4279	21	FSM	ENSMUSG00000029122.12	ENSMUST00000031005.11	4325	21	43	3	15	-3	multi-exon	FALSE	canonical	1	3	junction_11	2.64764045897474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTGTTCTTGCCTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	37494195	37456517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_37457845_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
Isoform_139384_26	chr5	-	1925	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	1	9	0	-9	multi-exon	FALSE	canonical	2	10	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGATGTCTGTGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	37981926	37977837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_37979045_37981208
Isoform_139387_3	chr5	-	2152	5	FSM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	428	1	-6	-1	multi-exon	TRUE	canonical	3	5	junction_1	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGACTGTCTGTACTC	NA	False	NA	0	True	AATAAA	-24	NA	38316823	38294536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
Isoform_139388_4	chr5	-	4119	8	NIC	ENSMUSG00000029127.16	novel	420	5	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	15.5471632690432	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTACTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	38377774	38347079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_38349482_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
Isoform_139389_7	chr5	-	3035	9	NIC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	16.9170771707172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTATATTTTGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	38377784	38357592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38369189_38369433_38370651_38371728_38373790_38373958_38377666
Isoform_13939_4	chr11	-	1732	13	FSM	ENSMUSG00000018752.20	ENSMUST00000174159.8	1470	13	-262	0	26	0	multi-exon	TRUE	canonical	3	10	junction_3	8.53871900358726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCCCAAATTCTTTTG	5189	False	NA	-3	True	ATTAAA	-30	NA	69586898	69573873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69574171_69574679_69574819_69575043_69575160_69575310_69575359_69575485_69575565_69575854_69575957_69577782_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
Isoform_139390_63	chr5	-	2786	8	FSM	ENSMUSG00000029127.16	ENSMUST00000094833.10	2978	8	25	167	-1	-1	multi-exon	FALSE	canonical	3	18	junction_5	10.0772526220277	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTATATTTTGTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	38377776	38357590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
Isoform_139391_10	chr5	-	2739	7	FSM	ENSMUSG00000029127.16	ENSMUST00000126267.8	2721	7	-23	5	-5	-2	multi-exon	FALSE	canonical	2	5	junction_4	14.1391890385081	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTTTTATATTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	38377780	38357594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38370651_38371728_38373790_38373958_38377666
Isoform_139392_3	chr5	-	1658	6	FSM	ENSMUSG00000029127.16	ENSMUST00000143436.8	1654	6	-6	2	0	-2	multi-exon	FALSE	canonical	2	4	junction_4	15.2918278828922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTTTTATATTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	38377775	38357594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38373790_38373958_38377666
Isoform_139393_3	chr5	-	2177	2	FSM	ENSMUSG00000029127.16	ENSMUST00000137577.3	1337	2	-26	-814	4	814	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATCCAAAAAAACTAAAATA	NA	False	NA	NA	False	NA	NA	NA	38377794	38371908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38373958_38377666
Isoform_139394_3	chr5	-	3139	12	FSM	ENSMUSG00000005107.14	ENSMUST00000067886.12	3602	12	103	360	-21	6	multi-exon	TRUE	canonical	1	1	junction_11	4.00619355209649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGCCTTGGCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	38637546	38506975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38508681_38520185_38520314_38537260_38537337_38539385_38539488_38549056_38549168_38556044_38556233_38574517_38574651_38593882_38594029_38597992_38598118_38610444_38610606_38634737_38634837_38637381
Isoform_139395_3	chr5	-	3196	12	FSM	ENSMUSG00000005107.14	ENSMUST00000067886.12	3602	12	41	365	41	1	multi-exon	FALSE	canonical	1	1	junction_11	4.00619355209649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTATTCTGCCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	38637608	38506980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38508681_38520185_38520314_38537260_38537337_38539385_38539488_38549056_38549168_38556044_38556233_38574517_38574651_38593882_38594029_38597992_38598118_38610444_38610606_38634737_38634837_38637381
Isoform_139396_4	chr5	+	1246	2	Antisense	novelGene_ENSMUSG00000005103.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTACATAGAGAAAACAGA	NA	False	NA	NA	False	CATAAA	-15	NA	38684155	38687013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_38685256_38686867
Isoform_139403_5	chr5	-	2953	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-34	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATCACTGGCTCTATGT	NA	False	NA	-5	True	ATTAAA	-18	NA	38719012	38684153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692680_38694478_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_139404_5	chr5	-	3088	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719149	38684155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692683_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_139405_5	chr5	-	2949	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-1	-140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATTGGCAGTTTCTTTG	NA	False	NA	41	True	ATTAAA	-16	NA	38719150	38684295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692683_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_139406_5	chr5	-	2797	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-18	-139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGGCAGTTTCTTTGC	NA	False	NA	42	True	ATTAAA	-17	NA	38718996	38684294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692685_38694482_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_139407_14	chr5	-	2992	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719053	38684155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692683_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_13941_4	chr11	-	1568	7	FSM	ENSMUSG00000097328.8	ENSMUST00000181810.8	1435	7	-240	107	-240	-107	multi-exon	FALSE	canonical	3	19	junction_6	8.13941029804985	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTCTTTGGGGTTCA	5172	False	NA	NA	False	AATAAA	-7	NA	69586915	69577182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
Isoform_139411_10	chr5	-	6568	3	FSM	ENSMUSG00000046572.11	ENSMUST00000178760.2	425	3	-2	-6141	-2	0	multi-exon	FALSE	canonical	3	25	junction_1	98.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTCTCTCATTTCG	NA	False	NA	-5	True	AATAAA	-16	NA	38842102	38825828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38832018_38839827_38840126_38842021
Isoform_139415_67	chr5	-	6805	4	FSM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	1	-2	1	0	multi-exon	FALSE	canonical	3	45	junction_3	106.871677986057	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842092	38825826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021
Isoform_139416_18	chr5	-	6852	4	FSM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-46	-2	30	0	multi-exon	FALSE	canonical	3	45	junction_3	106.871677986057	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842139	38825826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021
Isoform_139421_199	chr5	-	6736	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	78	2	2	0	multi-exon	FALSE	canonical	3	222	junction_2	31	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTCTCTCATTTCG	NA	False	NA	-5	True	AATAAA	-16	NA	38842091	38825828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38832197_38839827_38840126_38842021
Isoform_139422_137	chr5	-	6767	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	49	0	-20	0	multi-exon	FALSE	canonical	3	222	junction_2	31	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842120	38825826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_38832197_38839827_38840126_38842021
Isoform_139423_8	chr5	-	6473	2	NIC	ENSMUSG00000046572.11	novel	6816	3	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842124	38825826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_38832197_38842021
Isoform_139424_4	chr5	-	1637	2	FSM	ENSMUSG00000051022.8	ENSMUST00000053116.7	1684	2	-28	75	-28	-75	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATAGCTCTTTGTTTT	NA	False	NA	NA	False	AATATA	-18	NA	39802005	39771356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_39772748_39801759
Isoform_139426_114	chr5	-	1734	8	FSM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	-42	5	-6	-4	multi-exon	FALSE	canonical	3	81	junction_2	195.851880725393	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTTTTTGGGATTT	NA	False	NA	-9	True	AATAAA	-9	NA	41865506	41782323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
Isoform_139427_488	chr5	-	1639	7	FSM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	-9	5	-6	-4	multi-exon	FALSE	canonical	3	424	junction_3	45.374980869295	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTTTTTGGGATTT	NA	False	NA	-9	True	AATAAA	-9	NA	41865506	41782323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
Isoform_139429_13	chr5	-	1551	6	NIC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	3	38	junction_4	194.631549343882	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTTTTTGGGATTT	NA	False	NA	-9	True	AATAAA	-9	NA	41865507	41782323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41860780_41860878_41865247
Isoform_139432_3	chr5	-	10354	27	FSM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	11	175	11	-175	multi-exon	FALSE	canonical	3	23	junction_1	28.7549584095699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTAGGTTTTTTTATT	NA	False	NA	-16	True	ATTAAA	-13	NA	42001647	41945055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
Isoform_139434_6	chr5	-	10336	26	FSM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	59	4	36	-4	multi-exon	FALSE	canonical	3	41	junction_22	25.3587381389532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTGAGTGACAAGAAT	NA	False	NA	-4	True	TATAAA	-18	NA	42001599	41944884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
Isoform_139438_4	chr5	-	3674	8	ISM	ENSMUSG00000061755.11	ENSMUST00000202200.2	3387	9	-12	2146	11	-2146	5prime_fragment	FALSE	canonical	3	41	junction_4	6.46813224152673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTTTTATTTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	42001647	41982003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
Isoform_139442_4	chr5	-	999	2	FSM	ENSMUSG00000104846.2	ENSMUST00000197178.2	372	2	-40	-587	-40	587	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCTAATTGGTTCCT	NA	False	NA	NA	False	ATTAAA	-24	NA	43512642	43509802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_43510700_43512540
Isoform_139443_15	chr5	-	1946	2	FSM	ENSMUSG00000104846.2	ENSMUST00000197178.2	372	2	6	-1580	6	1580	multi-exon	FALSE	canonical	2	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTCCTTGTCTTCG	NA	False	NA	NA	False	NA	NA	NA	43512596	43508809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_43510700_43512540
Isoform_139445_17	chr5	-	2812	11	FSM	ENSMUSG00000039753.17	ENSMUST00000196483.5	2814	11	-3	5	-3	3	multi-exon	FALSE	canonical	3	15	junction_5	167.474057692527	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATATCTTTTGTGTTGT	8866	False	NA	-6	True	AATAAA	-23	NA	43939454	43901962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918195_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
Isoform_139450_910	chr5	-	2824	11	FSM	ENSMUSG00000039753.17	ENSMUST00000047857.16	2858	11	33	1	1	-1	multi-exon	FALSE	canonical	3	499	junction_3	32.2155242080584	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTTTGTGTTGTGATT	8861	False	NA	-2	True	AATAAA	-27	NA	43939459	43901958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
Isoform_139453_18	chr5	-	2259	10	FSM	ENSMUSG00000039753.17	ENSMUST00000124610.6	2306	10	-19	66	0	-66	multi-exon	FALSE	canonical	3	499	junction_2	33.8234340562579	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTTTGTGGAGGTAA	8857	False	NA	NA	False	AATAAA	-44	NA	43939463	43908013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
Isoform_139461_21	chr5	-	1161	2	FSM	ENSMUSG00000048373.9	ENSMUST00000061299.9	1161	2	-2	2	-2	1	multi-exon	FALSE	canonical	3	24	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCACTGTTTCCTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	44139108	44136203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_44137311_44139054
Isoform_139462_4	chr5	-	3706	28	FSM	ENSMUSG00000029086.16	ENSMUST00000074113.13	3966	28	257	3	-16	-1	multi-exon	FALSE	canonical	2	5	junction_24	9.32068513939636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTGGTGTTTGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	44259039	44150964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44215967_44215995_44220467_44220527_44251736_44252111_44258989
Isoform_139463_11	chr5	-	3706	27	FSM	ENSMUSG00000029086.16	ENSMUST00000087441.11	3664	27	-44	2	-44	1	multi-exon	FALSE	canonical	3	24	junction_7	5.3433861125628	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTTGGTGTTTGGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	44259067	44150965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
Isoform_139465_7	chr5	-	3673	26	NIC	ENSMUSG00000029086.16	novel	3664	27	NA	NA	-34	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	8.13348633735866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTGGTGTTTGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	44259057	44150964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_44151839_44152416_44152457_44158118_44158188_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
Isoform_139466_9	chr5	-	3572	15	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	29.1194759147726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCACTGAATTTCTT	NA	False	NA	-4	True	AATAAA	-23	NA	44383966	44332504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44356654_44356721_44361551_44361671_44375445_44375577_44383755
Isoform_139467_3	chr5	-	3639	15	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	-68	-7	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	29.1194759147726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGGTCACTGAATTT	NA	False	NA	-7	True	AATAAA	-20	NA	44384036	44332507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44356654_44356721_44361551_44361671_44375445_44375577_44383755
Isoform_139468_58	chr5	-	3541	14	FSM	ENSMUSG00000046985.12	ENSMUST00000055128.12	3513	14	-37	9	-33	-4	multi-exon	FALSE	canonical	3	70	junction_1	11.6390487421138	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCACTGAATTTCTT	NA	False	NA	-4	True	AATAAA	-23	NA	44384001	44332504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
Isoform_139470_3	chr5	-	3690	14	FSM	ENSMUSG00000046985.12	ENSMUST00000055128.12	3513	14	-187	10	-183	-5	multi-exon	FALSE	canonical	3	70	junction_1	11.6390487421138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCACTGAATTTCT	NA	False	NA	-5	True	AATAAA	-22	NA	44384151	44332505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
Isoform_139472_4	chr5	-	3380	13	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	24.4828454682503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCACTGAATTTCTT	NA	False	NA	-4	True	AATAAA	-23	NA	44383959	44332504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44375445_44375577_44383755
Isoform_139474_3	chr5	-	1406	2	FSM	ENSMUSG00000105519.2_ENSMUSG00000046985.12	ENSMUST00000196151.2	619	2	-5	-782	-5	782	multi-exon	FALSE	canonical	3	90	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AAAAAG	-9	NA	44383973	44374388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_44375577_44383755
Isoform_139478_941	chr5	-	1324	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	56	0	-4	0	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607522	45591394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
Isoform_139479_297	chr5	-	1380	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607578	45591394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
Isoform_139484_13	chr5	-	5591	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	121	-4	-6	4	multi-exon	FALSE	canonical	3	11	junction_1	22.5197444232586	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTTTTCAAAGTGGCC	NA	False	NA	0	True	AATAAA	-25	NA	46014836	45854518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
Isoform_139489_5	chr5	-	2923	6	FSM	ENSMUSG00000015882.19	ENSMUST00000190036.7	5463	6	-33	2573	1	693	multi-exon	FALSE	canonical	3	25	junction_1	19.1562000407179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGTAATAGCCTGAG	NA	False	NA	NA	False	AATAAA	-24	NA	46014842	45857098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_45859340_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
Isoform_139490_30	chr5	-	4929	7	FSM	ENSMUSG00000015882.19	ENSMUST00000016026.14	4884	7	16	-61	4	5	multi-exon	FALSE	canonical	3	22	junction_1	18.7349939951952	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTGAGTTCTTTGAGT	NA	False	NA	NA	False	AGTAAA	-22	NA	46014839	45887671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
Isoform_139492_4	chr5	-	4848	6	NIC	ENSMUSG00000015882.19	novel	4884	7	NA	NA	-6	-18	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	27.5782523014059	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAAGAAAAGTAAACT	NA	False	NA	NA	False	NA	NA	NA	46014861	45887694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45952634_45952701_46014688
Isoform_139508_16	chr5	-	4685	20	NIC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_18	145.136195469831	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	50216344	50117298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215475_50215686_50215893
Isoform_139510_1339	chr5	-	4477	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	3	0	3	0	multi-exon	FALSE	canonical	3	391	junction_6	33.7942668086734	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216345	50117297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
Isoform_139511_45	chr5	-	4534	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	-49	-5	-49	5	multi-exon	FALSE	canonical	3	391	junction_6	33.7942668086734	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTGGTGGCTTATGTT	NA	False	NA	-5	True	AATAAA	-19	NA	50216397	50117292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
Isoform_139517_15	chr5	-	2502	14	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	23	18892	23	8673	5prime_fragment	FALSE	canonical	3	391	junction_1	38.4304489732299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAACTGGCTCCATTTAA	NA	False	NA	NA	False	NA	NA	NA	50216325	50136189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
Isoform_139524_40	chr5	-	2986	14	FSM	ENSMUSG00000029169.12	ENSMUST00000200186.5	2375	14	-133	-478	4	-12	multi-exon	FALSE	canonical	3	57	junction_4	209.215072940651	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCCCAAGTCCTTCT	NA	False	NA	-10	True	AATAAA	-15	NA	52347852	52307556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314912_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
Isoform_139547_1812	chr5	-	2993	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	5	12	5	-12	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCCCAAGTCCTTCT	NA	False	NA	-10	True	AATAAA	-15	NA	52347851	52307556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
Isoform_139548_235	chr5	-	3023	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	-25	12	-25	-12	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCCCAAGTCCTTCT	NA	False	NA	-10	True	AATAAA	-15	NA	52347881	52307556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
Isoform_139551_48	chr5	-	5645	13	NIC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	5	-12	intron_retention	FALSE	canonical	3	749	junction_9	48.9020421068714	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCCCAAGTCCTTCT	NA	False	NA	-10	True	AATAAA	-15	NA	52347851	52307556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
Isoform_139557_3	chr5	-	3344	12	FSM	ENSMUSG00000045790.11	ENSMUST00000059428.7	3295	12	-51	2	-51	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.385694607919935	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATGGTTTCCCTTGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	52628914	52531994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_52534021_52542446_52542564_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561532_52562377_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400_52596563_52628692
Isoform_139559_14	chr5	-	1923	8	FSM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	5	4345	5	-4345	multi-exon	FALSE	canonical	3	32	junction_6	6.36636570147348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCTCAGAGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	52723640	52695203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
Isoform_139560_3	chr5	-	6353	8	FSM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	-72	-8	-72	8	multi-exon	FALSE	canonical	3	32	junction_6	6.36636570147348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCTGGTCTACTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	52723717	52690850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
Isoform_139564_92	chr5	-	5239	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	9	4	9	-4	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACACTGAAGTCTTCTTG	NA	False	NA	20	True	AATAAA	-37	NA	52827041	52797432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
Isoform_139570_3	chr5	-	5159	11	FSM	ENSMUSG00000029173.13	ENSMUST00000150709.8	5185	11	2	24	2	-24	multi-exon	FALSE	canonical	2	6	junction_9	24.1412510032103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTGGAAGTGCAAATAA	NA	False	NA	0	True	AATAAA	-28	NA	52827048	52797452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826307_52826396_52826916
Isoform_139571_3	chr5	-	2088	5	ISM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	9	22705	9	-6449	5prime_fragment	FALSE	canonical	3	71	junction_3	7.29297607290741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAAGTCTTATTTGTTT	NA	False	NA	NA	False	ATTAAA	-32	NA	52827041	52820133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
Isoform_139572_3	chr5	-	605	2	ISM	ENSMUSG00000029173.13	ENSMUST00000123856.2	751	7	-83	12230	10	-12230	5prime_fragment	FALSE	canonical	3	76	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAGCAAAATTTAAAA	NA	False	NA	NA	False	TATAAA	-15	NA	52827040	52825914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_52826396_52826916
Isoform_139573_7	chr5	-	7350	33	FSM	ENSMUSG00000037999.14	ENSMUST00000076623.8	7306	33	-46	2	-7	-2	multi-exon	FALSE	canonical	1	2	junction_29	4.00183063578408	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCCTCTTGTGTCTCT	NA	False	NA	1	True	ATTAAA	-22	NA	62923509	62759789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_62762000_62763417_62763553_62769046_62769111_62771336_62771373_62772346_62772430_62779181_62779310_62787475_62787605_62793294_62793413_62796304_62796380_62798670_62798740_62800137_62800286_62803525_62803632_62807031_62807245_62811388_62811553_62826131_62826196_62826369_62826569_62827222_62827326_62828278_62828424_62833294_62833430_62833854_62834030_62834444_62834628_62835287_62835374_62840697_62840898_62842903_62843020_62855583_62855763_62863950_62864072_62872075_62872146_62887863_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
Isoform_139579_67	chr5	-	2775	4	ISM	ENSMUSG00000047881.15	ENSMUST00000087327.13	3093	8	38032	2	-14	-2	3prime_fragment	FALSE	canonical	3	541	junction_1	12.2565175405668	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGCGACATCTTACAG	5408	False	NA	-15	True	AATAAA	-21	NA	64088134	64066409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820
Isoform_139594_650	chr5	-	3064	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	19	158	19	10	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACAGGACCAGCTTCTT	NA	False	NA	-3	True	AATAAA	-33	NA	64126221	64066397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
Isoform_139611_6	chr5	-	1485	4	FSM	ENSMUSG00000105402.5	ENSMUST00000198582.5	2879	4	3	1391	3	-20	multi-exon	FALSE	canonical	3	10	junction_2	4.89897948556636	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTAAGAACATA	NA	False	NA	NA	False	NA	NA	NA	64768040	64752590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_64753667_64759324_64759493_64767442_64767499_64767855
Isoform_139618_317	chr5	-	4722	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	-23	0	-23	0	multi-exon	TRUE	canonical	3	281	junction_12	79.0184138174275	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	0	True	NA	-4	True	AATAAA	-19	NA	65492987	65419194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
Isoform_139620_36	chr5	-	4750	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	-51	0	-2	0	multi-exon	FALSE	canonical	3	281	junction_12	79.0184138174275	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493015	65419194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
Isoform_139626_292	chr5	-	4724	25	FSM	ENSMUSG00000029191.17	ENSMUST00000204965.3	4751	25	26	1	-23	-1	multi-exon	FALSE	canonical	3	270	junction_12	80.615847887097	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	0	True	NA	-5	True	AATAAA	-18	NA	65492987	65419195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
Isoform_139633_184	chr5	-	4725	25	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_1	102.558519880115	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	0	True	NA	-4	True	AATAAA	-19	NA	65492987	65419194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
Isoform_139639_187	chr5	-	4728	25	FSM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	-26	-750	-23	0	multi-exon	FALSE	canonical	3	185	junction_1	103.759328563213	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	0	True	NA	-4	True	AATAAA	-19	NA	65492987	65419194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
Isoform_139659_5379	chr5	-	692	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	46	0	0	0	multi-exon	FALSE	canonical	3	5084	junction_7	3201.89202994551	5379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548741	65545706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
Isoform_139660_81	chr5	-	740	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	5084	junction_7	3201.89202994551	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548789	65545706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
Isoform_139664_125	chr5	-	812	7	FSM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	-18	-114	0	0	multi-exon	FALSE	canonical	3	5084	junction_6	3284.20622914511	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548741	65545706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
Isoform_139667_56	chr5	-	2311	12	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	127.934900801053	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCTTCAATTTACGTA	NA	False	NA	-15	True	AATAAA	-20	NA	65585745	65570565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65585656
Isoform_139669_481	chr5	-	2323	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	225	2	225	1	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCTTCAATTTACGTA	NA	False	NA	-15	True	AATAAA	-20	NA	65593067	65570565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
Isoform_139670_345	chr5	-	2451	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	97	2	97	1	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCTTCAATTTACGTA	NA	False	NA	-15	True	AATAAA	-20	NA	65593195	65570565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
Isoform_139675_171	chr5	-	2484	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	62	4	62	-1	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATTCTTCAATTTACG	NA	False	NA	-17	True	AATAAA	-18	NA	65593230	65570567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
Isoform_139687_180	chr5	-	1082	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	518	2960	-1	0	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTTTAGAATCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	65650225	65607146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
Isoform_139688_20	chr5	-	1175	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	423	2962	83	-2	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTTGGTTTAGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	65650320	65607148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
Isoform_139691_5	chr5	-	3986	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	571	3	42	-3	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCGTTTTCTGTTTGA	NA	False	NA	-6	True	AATAAA	-16	NA	65650172	65604189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
Isoform_139693_5	chr5	-	1002	5	FSM	ENSMUSG00000037822.13	ENSMUST00000121661.8	1056	5	53	1	53	0	multi-exon	FALSE	canonical	2	20	junction_4	163.329421721869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTTTAGAATCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	65650350	65607146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650283
Isoform_139694_8	chr5	-	1110	6	NNC	ENSMUSG00000037822.13	novel	1177	6	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_5	184.420606223925	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTGGTTTAGAATCCA	NA	False	NA	NA	False	AATAAA	-17	NA	65650180	65607147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65642396_65642471_65650078
Isoform_139722_200	chr5	-	6940	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	38	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	2679	False	NA	NA	False	AATAAA	-20	NA	65855578	65765119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
Isoform_139732_14	chr5	-	5699	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	8	-1278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGTCTTATCTTTTTA	2649	False	NA	-4	True	AATAAA	-17	NA	65855608	65766390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
Isoform_139736_18	chr5	-	5362	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8401	-1277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCTTATCTTTTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	65864017	65766389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
Isoform_139740_23	chr5	-	6595	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8365	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	NA	False	NA	NA	False	AATAAA	-19	NA	65863981	65765120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
Isoform_139744_7	chr5	-	4125	28	ISM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	-396	7474	21	136	5prime_fragment	FALSE	canonical	3	463	junction_27	48.5571517097879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTGTGTTTGTGTGTTC	2662	False	NA	NA	False	AATAAA	-26	NA	65855595	65780076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
Isoform_139747_8	chr5	-	4667	6	NIC	ENSMUSG00000070780.12	novel	4643	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	13.4313067123047	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAAGACTTTCTTTTCC	2634	False	NA	-2	True	AATAAA	-16	NA	66211910	66173898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66211824
Isoform_139749_5	chr5	-	5102	7	NIC	ENSMUSG00000070780.12	novel	4703	7	NA	NA	-173	-4	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	12.9282206389313	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTTTCAAGACTTTCT	NA	False	NA	-7	True	AATAAA	-11	NA	66308839	66173903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308395
Isoform_139753_10	chr5	-	4952	7	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	96	0	-40	0	3prime_fragment	FALSE	canonical	3	18	junction_6	10.0235833025033	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCAAGACTTTCTTTTC	NA	False	NA	-3	True	AATAAA	-15	NA	66309171	66173899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308881
Isoform_139758_5	chr5	-	2082	4	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	250	8996	108	-11	internal_fragment	FALSE	canonical	3	18	junction_3	8.49836585598798	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTGAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66309017	66182895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_66184633_66203429_66203557_66255049_66255132_66308881
Isoform_139759_3	chr5	-	2227	4	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	105	8996	-31	-11	internal_fragment	FALSE	canonical	3	18	junction_3	8.49836585598798	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTGAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66309162	66182895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_66184633_66203429_66203557_66255049_66255132_66308881
Isoform_139761_4	chr5	-	3291	16	FSM	ENSMUSG00000029207.17	ENSMUST00000162366.8	6540	16	87	3162	0	1	multi-exon	FALSE	canonical	3	21	junction_4	23.9298976178336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776014	66459229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139762_3	chr5	-	3316	16	NIC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	28.4436284605182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCC	NA	False	NA	NA	False	ATTAAA	-8	NA	66776037	66459230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139763_4	chr5	-	3447	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-87	3166	6	-6	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-2	NA	66776111	66459236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139764_3	chr5	-	3517	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-150	3159	-47	1	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776174	66459229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139765_10	chr5	-	3392	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-25	3159	-18	1	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776049	66459229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139766_8	chr5	-	6516	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGTAATGGGAGGT	NA	False	NA	-2	True	ATTAAA	-13	NA	66776014	66456070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139767_3	chr5	-	5901	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-20	645	-13	-533	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGCACTGCTAATTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	66776044	66456715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139768_12	chr5	-	3352	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23578	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.8998836434113	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66752405	66459229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_139769_3	chr5	-	6496	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23587	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.8998836434113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCACCTTAGTAATG	NA	False	NA	-8	True	ATTAAA	-7	NA	66752396	66456076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_139770_4	chr5	-	3374	17	NIC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	34.215710481444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776028	66459229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139771_5	chr5	-	3359	17	NNC	ENSMUSG00000029207.17	novel	3362	18	NA	NA	23573	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.6808772313686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCC	NA	False	NA	NA	False	ATTAAA	-8	NA	66752410	66459230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_139773_16	chr5	-	3327	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-41	3047	-16	1	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776047	66459229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139774_10	chr5	-	6466	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-27	-106	-2	-6	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCACCTTAGTAATG	NA	False	NA	-8	True	ATTAAA	-7	NA	66776033	66456076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139775_3	chr5	-	6863	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-30	-500	-5	363	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTGTGTTGTGTTGTC	NA	False	NA	NA	False	AATAAA	-23	NA	66776036	66455682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139777_3	chr5	-	6534	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-97	-104	-2	-8	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATCACCTTAGTAA	NA	False	NA	-10	True	ATTAAA	-5	NA	66776103	66456078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139779_24	chr5	-	3280	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23587	1	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_15	19.4792196968975	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66752396	66459229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_139781_6	chr5	-	6426	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23593	-7	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_15	19.4792196968975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCACCTTAGTAAT	NA	False	NA	-9	True	ATTAAA	-6	NA	66752390	66456077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_139782_12	chr5	-	3316	16	NIC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_11	22.2297098496584	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776033	66459229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139784_6	chr5	-	6494	16	NIC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_11	22.2297098496584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGTAATGGGAGGT	NA	False	NA	-2	True	ATTAAA	-13	NA	66776052	66456070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_139787_6	chr5	-	3272	16	NNC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	23598	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	25.1761792176653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66752385	66459229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_139788_3	chr5	-	6436	16	NNC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	23586	-7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	25.1761792176653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCACCTTAGTAAT	NA	False	NA	-9	True	ATTAAA	-6	NA	66752397	66456077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_139789_3	chr5	-	588	3	NNC	ENSMUSG00000029207.17	novel	629	4	NA	NA	23592	-29912	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	36	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAACCTGTTA	NA	False	NA	NA	False	AATACA	-39	NA	66752391	66649168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_66649516_66700804_66700961_66752306
Isoform_139791_11	chr5	-	7840	5	FSM	ENSMUSG00000092060.5	ENSMUST00000169190.5	7935	5	92	3	-90	-2	multi-exon	FALSE	canonical	3	28	junction_1	27.6710588883042	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTGACTTGATTTT	NA	False	NA	-8	True	AATAAA	-17	NA	67585050	67549492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584408
Isoform_139793_32	chr5	-	7769	5	NIC	ENSMUSG00000092060.5	novel	7935	5	NA	NA	-90	-2	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	16.0682139642214	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTGACTTGATTTT	NA	False	NA	-8	True	AATAAA	-17	NA	67585050	67549492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408
Isoform_139794_5	chr5	-	7870	5	NIC	ENSMUSG00000092060.5	novel	7935	5	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	16.0682139642214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTGACTTGATTTTT	NA	False	NA	-7	True	AATAAA	-18	NA	67585150	67549491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408
Isoform_139796_32	chr5	-	7108	36	FSM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-61	1022	0	-1	multi-exon	FALSE	canonical	3	27	junction_2	10.9452813428194	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATACTTTGCTGTGTTT	NA	False	NA	-6	True	AATAAA	-17	NA	68004774	67776504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
Isoform_139799_3	chr5	-	7036	35	NIC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	-1	0	intron_retention	TRUE	canonical	1	4	junction_29	12.9002025144373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATACTTTGCTGTGTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	68004775	67776503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
Isoform_139800_5	chr5	-	3755	26	ISM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-61	48221	0	15781	5prime_fragment	FALSE	canonical	3	35	junction_4	11.0079244183452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAATCTGATGATGCA	NA	False	NA	NA	False	ATTAAA	-2	NA	68004774	67823703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
Isoform_139801_3	chr5	-	3469	18	ISM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-61	125799	0	22696	5prime_fragment	FALSE	canonical	3	36	junction_8	11.382314941417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAGCAAAGTCTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	68004774	67901281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
Isoform_139802_17	chr5	-	850	7	FSM	ENSMUSG00000037685.16	ENSMUST00000113652.8	854	7	-1	5	-1	-5	multi-exon	FALSE	canonical	3	53	junction_2	8.34166250416147	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTCATGATTCTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	68004775	67938226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
Isoform_139804_12	chr5	-	1832	7	FSM	ENSMUSG00000029209.16	ENSMUST00000173927.8	1011	7	-17	-804	-2	-7	multi-exon	FALSE	canonical	3	26	junction_3	36.2142544065486	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATAATTATCTCATT	NA	False	NA	NA	False	AATAAA	-38	NA	69749634	69732350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_69733297_69735320_69735496_69736850_69737030_69742316_69742500_69743807_69743910_69747003_69747167_69749550
Isoform_139805_89	chr5	-	1842	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	49	3	-2	-3	multi-exon	TRUE	canonical	3	104	junction_4	11.5998084275369	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATTATCTCATTTTCT	NA	False	NA	NA	False	AATAAA	-42	NA	69749634	69732346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
Isoform_139811_6	chr5	-	484	3	FSM	ENSMUSG00000049387.11	ENSMUST00000050129.6	542	3	-50	108	-50	-108	multi-exon	FALSE	canonical	3	51	junction_2	6	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	AGTAAA	-33	NA	71705598	71600274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_71600613_71660793_71660857_71705515
Isoform_139812_145	chr5	-	1429	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	34	2432	1	4	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGCTTGATTTCAGTG	NA	False	NA	0	True	AATACA	-18	NA	72325498	72316349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
Isoform_139813_10	chr5	-	3889	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	5	1	5	-1	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATAGACTCATGGGTAT	NA	False	NA	-5	True	NA	NA	NA	72325527	72313918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
Isoform_139825_243	chr5	-	3699	23	FSM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	10	3	10	0	multi-exon	FALSE	canonical	3	106	junction_22	12.1822421907212	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGTGATAAAGGATAT	NA	False	NA	NA	False	ATTAAA	-13	NA	72717017	72670646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
Isoform_139826_7	chr5	-	3738	23	FSM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	-26	0	-26	0	multi-exon	FALSE	canonical	3	106	junction_22	12.1822421907212	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72717053	72670643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
Isoform_139829_3	chr5	-	4764	22	NIC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	-8	1	intron_retention	FALSE	canonical	3	106	junction_21	11.8734827172458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTGATAAAGGATATT	NA	False	NA	NA	False	ATTAAA	-14	NA	72716999	72670645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_72671675_72673554_72673609_72674368_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
Isoform_139830_8	chr5	-	825	5	FSM	ENSMUSG00000072889.10	ENSMUST00000146761.2	798	5	-23	-4	13	2	multi-exon	FALSE	canonical	3	106	junction_4	15.8587515271537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTGTTGGAAGCT	NA	False	NA	NA	False	AATAAA	-29	NA	72717014	72707562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
Isoform_139831_5	chr5	-	2607	19	FSM	ENSMUSG00000029217.17	ENSMUST00000071944.13	2659	19	29	23	-19	-1	multi-exon	FALSE	canonical	1	2	junction_5	3.16471674858358	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACGTTTATCTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	73025758	72913081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_72913723_72914705_72914864_72914946_72915066_72917685_72917751_72920906_72921124_72921466_72921639_72922854_72922930_72926047_72926182_72928489_72928570_72931173_72931229_72936763_72936830_72939345_72939519_72941060_72941102_72943259_72943389_72944080_72944163_72946482_72946588_72980798_72980985_72982386_72982474_73025736
Isoform_139832_3	chr5	-	4159	15	ISM	ENSMUSG00000070733.14	ENSMUST00000202697.4	5743	21	13323	338	-3028	1	3prime_fragment	FALSE	canonical	3	30	junction_13	5.12695955569325	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTGTCCTTTAAATTA	NA	False	NA	-3	True	GATAAA	-28	NA	73215195	73177667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066
Isoform_139833_33	chr5	-	2136	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	401	17	-33	-3	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAGGCAGAGCCAATAC	NA	False	NA	-18	True	AATAAA	-18	NA	73495934	73479558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
Isoform_139837_5	chr5	-	858	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	226	1470	182	-323	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGTAATTCTCTCACC	NA	False	NA	-3	True	AATATA	-16	NA	73496109	73481011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
Isoform_139838_3	chr5	-	2484	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	53	17	9	-3	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAGGCAGAGCCAATAC	NA	False	NA	-18	True	AATAAA	-18	NA	73496282	73479558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
Isoform_139839_3	chr5	-	2305	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	227	22	183	-8	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACAAGGCAGAGCC	NA	False	NA	-23	True	AATAAA	-13	NA	73496108	73479563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
Isoform_139840_3	chr5	-	367	3	ISM	ENSMUSG00000029153.12	ENSMUST00000201908.4	2378	6	356	9809	-34	-4357	5prime_fragment	FALSE	canonical	3	44	junction_2	59.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAATAAATTAATAATCG	NA	False	NA	NA	False	AATAAA	-28	NA	73495935	73489364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_73489544_73493162_73493289_73495873
Isoform_139842_72	chr5	-	2878	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	53	855	53	-855	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCTATATTACAAAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	73805080	73790946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
Isoform_139845_5	chr5	-	3715	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	69	2	69	-2	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCAGTTTCTTCGTGAC	NA	False	NA	NA	False	AATAAA	-15	NA	73805064	73790093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
Isoform_139846_25	chr5	-	3084	8	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18580	-855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.3052497641136	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCTATATTACAAAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	73823713	73790946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
Isoform_139849_6	chr5	-	3104	8	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18598	-849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.7753683947945	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTACAAAGTATTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	73823731	73790940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823478_73823648
Isoform_139851_4	chr5	-	3356	7	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18580	-857	intron_retention	FALSE	canonical	0	0	junction_5	32.1580299286024	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACCCTATATTACAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	73823713	73790948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_73793042_73796725_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
Isoform_139853_62	chr5	-	2480	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	13	1089	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTCTTGGTTTTCCTA	NA	False	NA	-21	True	ATTAAA	-27	NA	74226396	74161370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
Isoform_139854_80	chr5	-	3081	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	79	-1317	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGCAGCTAATT	NA	False	NA	-6	True	ATTAAA	-12	NA	74226330	74160703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
Isoform_139855_41	chr5	-	4455	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	13	-9	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTAATTTATTTTTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	74226396	74159395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
Isoform_139857_24	chr5	-	4545	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	6	74	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	74226403	74159312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
Isoform_139859_110	chr5	-	3212	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	28	1317	17	-1317	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGCAGCTAATT	NA	False	NA	-6	True	ATTAAA	-12	NA	74229064	74160703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
Isoform_139861_36	chr5	-	4528	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	28	1	17	-1	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTTGGCTCCTATT	NA	False	NA	NA	False	ATTAAA	-25	NA	74229064	74159387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
Isoform_139862_7	chr5	-	4557	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	-1	1	-1	-1	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTTGGCTCCTATT	NA	False	NA	NA	False	ATTAAA	-25	NA	74229093	74159387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
Isoform_139864_37	chr5	-	3246	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	-1	1312	-1	-1312	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	-1	True	ATTAAA	-17	NA	74229093	74160698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
Isoform_139865_23	chr5	-	4604	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	28	-75	17	75	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	74229064	74159311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
Isoform_139869_138	chr5	-	2405	9	FSM	ENSMUSG00000062110.15	ENSMUST00000072857.13	3672	9	9	1258	2	15	multi-exon	FALSE	canonical	3	48	junction_1	6.19979838381862	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTGACTTCGCCAGCTG	NA	False	NA	12	True	AATAAA	-40	NA	74692401	74366734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_74367057_74372911_74373032_74385975_74386111_74397099_74397246_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
Isoform_139871_6	chr5	-	2654	11	FSM	ENSMUSG00000029228.16	ENSMUST00000117388.8	2564	11	-90	0	-90	0	multi-exon	FALSE	canonical	3	14	junction_9	3.95474398665704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTAGAGGATTTCTT	NA	False	NA	1	True	AATAAA	-19	NA	74863663	74757764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452
Isoform_139872_34	chr5	-	2532	11	FSM	ENSMUSG00000029228.16	ENSMUST00000117388.8	2564	11	32	0	32	0	multi-exon	FALSE	canonical	3	14	junction_9	3.95474398665704	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTAGAGGATTTCTT	NA	False	NA	1	True	AATAAA	-19	NA	74863541	74757764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452
Isoform_139873_4	chr5	-	2703	12	NNC	ENSMUSG00000029228.16	novel	2564	11	NA	NA	-1352	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	6.31016495966483	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGGTGTAGAGGATTT	NA	False	NA	-2	True	AATAAA	-16	NA	74864925	74757767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452_74863571_74864780
Isoform_139874_3	chr5	-	2687	12	NNC	ENSMUSG00000029228.16	novel	2564	11	NA	NA	-1383	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	6.31016495966483	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTGTAGAGGATTTCT	NA	False	NA	0	True	AATAAA	-18	NA	74864956	74757765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452_74863571_74864829
Isoform_139875_137	chr5	-	2094	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	162	7443	162	5749	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTTAATTTATATACC	NA	False	NA	-2	True	ATTAAA	-15	NA	75205273	75166091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
Isoform_139876_7	chr5	-	2154	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	102	7443	102	5749	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTTAATTTATATACC	NA	False	NA	-2	True	ATTAAA	-15	NA	75205333	75166091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
Isoform_139877_337	chr5	-	1118	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	146	8435	146	4757	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGCAGCCTTTGTTA	NA	False	NA	75	True	AATACA	-16	NA	75205289	75167083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
Isoform_139878_35	chr5	-	1142	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	122	8435	122	4757	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGCAGCCTTTGTTA	NA	False	NA	75	True	AATACA	-16	NA	75205313	75167083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
Isoform_13988_233	chr11	-	6730	29	FSM	ENSMUSG00000005198.16	ENSMUST00000058470.16	6740	29	6	4	6	-4	multi-exon	FALSE	canonical	2	202	junction_15	57.5883527056204	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGTATGTGTACTG	NA	False	NA	-7	True	AATAAA	-18	NA	69649457	69624826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
Isoform_139884_10	chr5	-	6508	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	162	3029	162	-3029	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTCTTATAACTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	75205273	75161677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
Isoform_139887_3	chr5	-	7477	23	NIC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	-8	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	11.9323160069308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTTTTGCATATTTTT	NA	False	NA	-3	True	ATTAAA	-17	NA	76452403	76360029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
Isoform_139888_6	chr5	-	7416	23	NIC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	11.4989219760624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTTGCATATTTTTTC	NA	False	NA	-1	True	ATTAAA	-19	NA	76452627	76360027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
Isoform_139889_3	chr5	-	9729	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	58	-2309	58	0	multi-exon	FALSE	canonical	3	18	junction_22	10.9767786450073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATTTTCCTTTCTTTA	NA	False	NA	-5	True	ATTAAA	-18	NA	76452337	76357714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
Isoform_139890_5	chr5	-	7403	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	67	8	67	-8	multi-exon	FALSE	canonical	3	18	junction_22	10.9767786450073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGTTTTGCATATTT	NA	False	NA	-5	True	ATTAAA	-15	NA	76452328	76360031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
Isoform_139891_3	chr5	-	7374	23	FSM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	55	2315	17	-6	multi-exon	FALSE	canonical	3	23	junction_22	10.4912399506674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTTTTGCATATTTTT	NA	False	NA	-3	True	ATTAAA	-17	NA	76452584	76360029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
Isoform_139892_4	chr5	-	1249	3	ISM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	49	60829	49	-1052	5prime_fragment	FALSE	canonical	3	18	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	76452346	76420852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_76421891_76451270_76451350_76452214
Isoform_139894_39	chr5	-	1141	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	23	17	0	-17	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATTAAGACATTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	76478980	76459990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
Isoform_139895_3	chr5	-	1045	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	0	136	0	-136	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGACTTATTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	76479003	76460109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
Isoform_139896_3	chr5	-	749	4	NIC	ENSMUSG00000029235.15	novel	1181	6	NA	NA	37	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.5192267069642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATTAAGACATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	76478943	76459992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_76460446_76472152_76472244_76472839_76472961_76478859
Isoform_139897_6	chr5	-	3811	17	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_16	25.5535589497823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATTTGTCTGTGGTCCTT	NA	False	NA	-2	True	ATTAAA	-17	NA	77053276	77023785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053117
Isoform_139899_17	chr5	-	3804	16	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	14	-1	combination_of_known_junctions	TRUE	canonical	3	27	junction_15	19.0349386363311	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTGTGGTCCTTTCC	NA	False	NA	1	True	ATTAAA	-20	NA	77053320	77023782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053117
Isoform_139901_23	chr5	-	3674	16	FSM	ENSMUSG00000055923.17	ENSMUST00000120963.8	3694	16	18	2	-4	-2	multi-exon	FALSE	canonical	3	29	junction_15	18.6828501275605	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTCTGTGGTCCTTTC	NA	False	NA	0	True	ATTAAA	-19	NA	77053343	77023783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
Isoform_139902_3	chr5	-	3628	15	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	15	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	24.6315709144643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATTTGTCTGTGGTCCTT	NA	False	NA	-2	True	ATTAAA	-17	NA	77053319	77023785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77053117
Isoform_139903_3	chr5	-	1219	5	FSM	ENSMUSG00000055923.17	ENSMUST00000154548.8	1080	5	-2	-137	-2	137	multi-exon	FALSE	canonical	3	29	junction_4	25.8891869319992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGTGTGTGTGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	77053341	77043951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
Isoform_139918_364	chr5	-	3574	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	352	55	-61	-55	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGCATCTGATTTTT	NA	False	NA	-6	True	TATAAA	-16	NA	77099073	77061177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
Isoform_139923_59	chr5	-	3933	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	-6	54	-6	-54	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCATCTGATTTTTT	NA	False	NA	-5	True	TATAAA	-17	NA	77099431	77061176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
Isoform_139928_22	chr5	-	3606	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	393	-18	-20	-9	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAGTACTAACAGCAC	NA	False	NA	67	True	AATAAA	-21	NA	77099032	77061104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
Isoform_139940_6	chr5	-	632	4	FSM	ENSMUSG00000053030.12	ENSMUST00000065216.11	631	4	0	-1	0	1	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCGTCTTTTCTGTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	77359318	77352952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_77353273_77354775_77354886_77357579_77357642_77359178
Isoform_139944_152	chr5	-	2607	7	FSM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	-314	-5	-314	5	multi-exon	FALSE	canonical	3	116	junction_4	16.2138486760204	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATCTGTGACCAAG	NA	False	NA	74	True	AATAAA	-19	NA	77458245	77442023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
Isoform_139949_17	chr5	-	2497	6	NIC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	-339	2	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	53.9013914477168	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCATGTATCTGTGACC	NA	False	NA	71	True	AATAAA	-16	NA	77458270	77442026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_77442404_77444932_77445051_77447504_77447622_77454120_77454324_77455399_77455565_77456753
Isoform_139958_3	chr5	-	1116	5	FSM	ENSMUSG00000036256.14	ENSMUST00000046746.10	1116	5	-4	4	-4	-4	multi-exon	TRUE	canonical	1	3	junction_4	2.29128784747792	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTTTTTTTAATGACA	NA	False	NA	NA	False	AATAAA	-17	NA	77555892	77497090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_77497347_77499074_77499202_77499759_77499877_77503408_77503519_77555386
Isoform_139962_160	chr5	-	3158	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	38	-4	2	4	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTCTGTGGTGGTGT	NA	False	NA	-2	True	ATTAAA	-21	NA	86213404	86159878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
Isoform_139963_7	chr5	-	3235	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	-45	2	-45	-2	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCATCTTGTCTGTGG	NA	False	NA	-8	True	ATTAAA	-15	NA	86213487	86159884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
Isoform_139967_5	chr5	-	3525	20	NNC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_17	42.8300125180833	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGCATCTTGTCTGTG	NA	False	NA	-9	True	ATTAAA	-14	NA	86213406	86159885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86208383_86208756_86209862_86209907_86213186
Isoform_139968_10	chr5	-	2984	18	NIC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	2	4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	34.9586013196806	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTCTGTGGTGGTGT	NA	False	NA	-2	True	ATTAAA	-21	NA	86213404	86159878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
Isoform_13997_15	chr11	-	826	2	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	10790	4	8667	-4	3prime_fragment	FALSE	canonical	3	28	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTTTTGTCTATTT	9572	False	NA	-6	True	ATTAAA	-20	NA	69675979	69674865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69675588_69675875
Isoform_139979_50	chr5	-	6562	33	FSM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	29	-1	29	1	multi-exon	FALSE	canonical	3	104	junction_13	11.1589632554956	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTGAGTTGCAACTA	7117	False	NA	-3	True	NA	NA	NA	86320633	86257144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320526
Isoform_13998_10	chr11	-	2180	11	FSM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	-35	10	-35	-10	multi-exon	TRUE	canonical	2	3	junction_10	6.56429737291052	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTAATCATTTTTGT	9276	False	NA	-12	True	ATTAAA	-14	NA	69686804	69674871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69675588_69675875_69676024_69676532_69676706_69677706_69677931_69683524_69683735_69684290_69684439_69684709_69684819_69684975_69685086_69685794_69685840_69686420_69686561_69686647
Isoform_139982_3	chr5	-	7446	33	FSM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	47	-903	-17	903	multi-exon	FALSE	canonical	3	104	junction_13	11.1589632554956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGGTTTGTGTGTCC	7135	False	NA	1	True	ATTAAA	-19	NA	86320615	86256242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320526
Isoform_139987_3	chr5	-	7474	33	FSM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	16	-900	16	900	multi-exon	FALSE	canonical	3	104	junction_13	11.1589632554956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTGTGGTTTGTGTG	7104	False	NA	-2	True	ATTAAA	-16	NA	86320646	86256245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320526
Isoform_14_1318	ERCC-00003	+	1005	1	FSM	ERCC-00003A	DQ516784	1007	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	AAAAAG	-29	NA	1	1006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00003_+_0_1000
Isoform_14000_4	chr11	-	2573	5	NNC	ENSMUSG00000042826.14	novel	2534	6	NA	NA	1764	-2	intron_retention	FALSE	canonical	1	1	junction_4	5.02493781056044	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGAGTGTTATCTGACA	5302	False	NA	-6	True	ATTAAA	-13	NA	69690778	69686900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_69689099_69689389_69689505_69690177_69690282_69690491_69690603_69690733
Isoform_140003_789	chr5	-	2566	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-49	21	-49	-11	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGTGTAGAAGAATCAA	NA	False	NA	-19	True	AATAAA	-15	NA	88824079	88807327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_140004_896	chr5	-	2532	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	0	6	0	4	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGTTCTGTATATTTT	NA	False	NA	-4	True	AATAAA	-30	NA	88824030	88807312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_140005_21	chr5	-	2621	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-104	21	-104	-11	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGTGTAGAAGAATCAA	NA	False	NA	-19	True	AATAAA	-15	NA	88824134	88807327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_140008_28	chr5	-	3117	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-48	-531	-48	531	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTGTCTTAG	NA	False	NA	NA	False	NA	NA	NA	88824078	88806775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_14001_4	chr11	-	2693	5	NNC	ENSMUSG00000042826.14	novel	2534	6	NA	NA	1221	-2	intron_retention	FALSE	canonical	1	1	junction_4	5.02493781056044	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGAGTGTTATCTGACA	4759	False	NA	-6	True	ATTAAA	-13	NA	69691321	69686900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_69689099_69689389_69689505_69690177_69690282_69690491_69690603_69691156
Isoform_140011_53	chr5	-	2796	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-49	-209	-49	209	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGGAGATTACCTAACAG	NA	False	NA	-31	True	AATAAA	-16	NA	88824079	88807097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_14002_6	chr11	-	2668	5	NNC	ENSMUSG00000042826.14	novel	3039	5	NA	NA	1757	2	intron_retention	FALSE	canonical	1	1	junction_4	4.96865172858795	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTTATCTGACATTTG	5295	False	NA	-2	True	ATTAAA	-17	NA	69690785	69686896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_69689099_69689389_69689589_69690177_69690282_69690491_69690603_69690733
Isoform_140021_92	chr5	-	1298	6	FSM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	33	2	4	1	multi-exon	FALSE	canonical	3	158	junction_3	53.4714877294432	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCTGGTGAGATAATT	NA	False	NA	-6	True	AATAAA	-14	NA	90371827	90362584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370191_90371474
Isoform_140022_16	chr5	-	1363	6	FSM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	-33	3	-33	0	multi-exon	FALSE	canonical	3	158	junction_3	53.4714877294432	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTCTGGTGAGATAAT	NA	False	NA	-7	True	AATAAA	-13	NA	90371893	90362585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370191_90371474
Isoform_140023_15	chr5	-	1267	6	NIC	ENSMUSG00000035505.15	novel	1333	6	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	93.3016612928194	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCTGGTGAGATAATT	NA	False	NA	-6	True	AATAAA	-14	NA	90371792	90362584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370195_90371474
Isoform_140024_4	chr5	-	1337	6	NIC	ENSMUSG00000035505.15	novel	1333	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	93.3016612928194	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTCTGGTGAGATAAT	NA	False	NA	-7	True	AATAAA	-13	NA	90371863	90362585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370195_90371474
Isoform_140026_124	chr5	-	1302	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	3	2	3	1	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCTGGTGAGATAATT	NA	False	NA	-6	True	AATAAA	-14	NA	90371828	90362584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
Isoform_140027_21	chr5	-	1334	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	-31	4	-2	-1	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCTCTGGTGAGATAA	NA	False	NA	-8	True	AATAAA	-12	NA	90371862	90362586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
Isoform_140028_6	chr5	-	1326	6	NIC	ENSMUSG00000035505.15	novel	1307	6	NA	NA	-12	3	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	93.5534072067928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGATAATTTCTTT	NA	False	NA	-1	True	AATAAA	-19	NA	90371843	90362579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370195_90371474
Isoform_140040_7	chr5	-	9259	34	FSM	ENSMUSG00000055204.16	ENSMUST00000168058.7	9311	34	362	-310	-17	-168	multi-exon	TRUE	canonical	1	20	junction_19	38.5954031243672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATATGTGTCCTGCCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	90514061	90375845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
Isoform_140042_6	chr5	-	7755	33	NIC	ENSMUSG00000055204.16	novel	9311	34	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	1	34	junction_19	34.2873741111433	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCACTTTTCTACTTGTA	NA	False	NA	NA	False	ATTAAA	-11	NA	90514066	90376601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
Isoform_140045_6	chr5	-	9292	34	FSM	ENSMUSG00000055204.16	ENSMUST00000014421.15	10458	34	341	825	-8	-172	multi-exon	FALSE	canonical	1	25	junction_19	38.1218865865083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAATATGTGTCCTGCC	NA	False	NA	-5	True	AATAAA	-15	NA	90514095	90375849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
Isoform_140047_17	chr5	-	8514	33	FSM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	18	-475	18	-171	multi-exon	FALSE	canonical	1	45	junction_32	30.9701847548574	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATATGTGTCCTGCCC	NA	False	NA	-4	True	AATAAA	-16	NA	90514069	90375848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
Isoform_140048_17	chr5	-	7763	33	FSM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	18	276	18	0	multi-exon	FALSE	canonical	1	45	junction_32	30.9701847548574	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTTCTACTTGTATA	NA	False	NA	NA	False	ATTAAA	-13	NA	90514069	90376599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
Isoform_14005_3	chr11	-	3439	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	-36	-1470	-36	1470	multi-exon	FALSE	canonical	3	73	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAAAGAAAACAGA	NA	False	NA	NA	False	AAGAAA	-31	NA	69696486	69692958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69695757_69695845
Isoform_140053_18	chr5	-	4531	25	ISM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	48	24888	5	3	5prime_fragment	FALSE	canonical	1	45	junction_24	31.0563723555873	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCGTGATTGTTAAAC	NA	False	NA	-1	True	AATAAA	-17	NA	90514039	90401211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
Isoform_14006_44	chr11	-	1995	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	-55	-7	-55	7	multi-exon	FALSE	canonical	3	73	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAAGTGTTTCCTTTGG	NA	False	NA	1	True	ATTAAA	-19	NA	69696505	69694421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69695757_69695845
Isoform_140060_10	chr5	-	2036	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-70	1	-70	-1	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTTTTATGGATGAAT	1265	False	NA	NA	False	TATAAA	-17	NA	92110997	92096763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_140061_40	chr5	-	1931	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-60	96	-60	1	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTTTTACAGACTTT	1275	False	NA	NA	False	AATAAA	-22	NA	92110987	92096858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_140062_99	chr5	-	1235	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	346	386	4	-289	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATTTTCTTTTCTTTTC	1681	False	NA	-5	True	ATTAAA	-19	NA	92110581	92097148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_140065_74	chr5	-	1364	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	217	386	-116	-289	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATTTTCTTTTCTTTTC	1552	False	NA	-5	True	ATTAAA	-19	NA	92110710	92097148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_140066_43	chr5	-	1651	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	218	98	-115	-1	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACTGTTTTACAGACT	1553	False	NA	NA	False	AATAAA	-20	NA	92110709	92096860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_140069_12	chr5	-	1636	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	331	0	-2	0	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTTATGGATGAATG	1666	False	NA	NA	False	TATAAA	-18	NA	92110596	92096762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_14007_6	chr11	-	2614	13	ISM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	218	143	196	71	3prime_fragment	FALSE	canonical	3	9	junction_11	5.86598007345936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTTTTCCTTTAATCC	9298	False	NA	NA	False	NA	NA	NA	69749338	69741973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230
Isoform_140072_4	chr5	-	3877	13	FSM	ENSMUSG00000029403.15	ENSMUST00000069937.11	3976	13	10	89	10	-89	multi-exon	FALSE	canonical	0	0	junction_1	2.51108652888656	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACGATATATGGCTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	92190890	92154021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92155994_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190657
Isoform_14008_6	chr11	-	2678	14	FSM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	-43	143	-43	71	multi-exon	FALSE	canonical	3	9	junction_11	5.7316726185222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTTTTCCTTTAATCC	9037	False	NA	NA	False	NA	NA	NA	69749599	69741973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
Isoform_140091_51	chr5	-	4227	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	46	-1557	46	4	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92231326	92200018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
Isoform_140094_557	chr5	-	4282	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-58	-2340	1	4	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92231575	92200018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
Isoform_14010_4	chr11	-	2732	14	FSM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	-42	88	-42	-88	multi-exon	FALSE	canonical	3	9	junction_11	5.7316726185222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGTGTTATCCGGTA	9038	False	NA	-94	True	NA	NA	NA	69749598	69741918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
Isoform_14011_10	chr11	-	2235	20	ISM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	4491	0	-557	0	3prime_fragment	FALSE	canonical	3	29	junction_17	7.4342920349514	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	69781874	69772392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689
Isoform_14012_67	chr11	-	2483	22	FSM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	-1	0	-1	0	multi-exon	FALSE	canonical	3	20	junction_20	9.40183800238705	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	9572	False	NA	-6	True	ATTAAA	-15	NA	69786366	69772392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
Isoform_140121_154	chr5	-	4118	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	97	17	53	1	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTATGTCCCTAA	NA	False	NA	-17	True	AATAAA	-16	NA	92231319	92200021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
Isoform_140123_86	chr5	-	1818	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	47	2367	3	-13	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACATG	NA	False	NA	NA	False	AATGAA	-6	NA	92231369	92202371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
Isoform_140128_1323	chr5	-	4185	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	3	-6	1	6	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGTCCCTAATTTAA	NA	False	NA	-12	True	AATAAA	-21	NA	92231575	92200016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
Isoform_14013_5	chr11	-	2291	21	NNC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	-748	1	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_20	11.7918403991913	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTAGTTCATTTAC	NA	False	NA	-5	True	ATTAAA	-16	NA	69782065	69772391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69781945
Isoform_140132_73	chr5	-	4208	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	-25	-1	-25	1	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTATGTCCCTAA	NA	False	NA	-17	True	AATAAA	-16	NA	92231603	92200021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
Isoform_14014_4	chr11	-	2732	21	NIC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	20	junction_19	9.10714005602198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	9574	False	NA	-6	True	ATTAAA	-15	NA	69786364	69772392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
Isoform_14015_4	chr11	-	2142	18	ISM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	10	1917	10	-1	5prime_fragment	FALSE	canonical	3	20	junction_16	9.78134655783288	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGAGGTGGTGAATT	9583	False	NA	NA	False	GATAAA	-26	NA	69786355	69774309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
Isoform_14016_5	chr11	-	1609	9	NIC	ENSMUSG00000018570.18	novel	1640	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.70087712549569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGAGCTGCGTGTCC	9770	False	NA	-8	True	AATAAA	-20	NA	69791739	69788183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69788319_69788436_69788581_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
Isoform_140160_6	chr5	-	1840	8	NNC	ENSMUSG00000029410.12	novel	2274	16	NA	NA	-11039	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.25905486623571	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTACCTGT	NA	False	NA	NA	False	NA	NA	NA	92387919	92374546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_92375087_92376505_92376594_92378261_92378426_92379578_92379686_92382032_92382176_92383590_92383777_92386603_92387003_92387706
Isoform_140161_3	chr5	-	2273	8	NNC	ENSMUSG00000029410.12	novel	2274	16	NA	NA	-11038	425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.25905486623571	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACATACTTTTTCCTTGC	NA	False	NA	NA	False	NA	NA	NA	92387918	92374112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_92375087_92376505_92376594_92378261_92378426_92379578_92379686_92382032_92382176_92383590_92383777_92386603_92387003_92387706
Isoform_140162_7	chr5	-	783	3	NNC	ENSMUSG00000029410.12	novel	732	3	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	10	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAATTACCTGTG	NA	False	NA	NA	False	NA	NA	NA	92376845	92374545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_92375087_92376505_92376594_92376691
Isoform_140164_25	chr5	-	2408	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	5	1	0	-1	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGGTCTGAGTGTCCTA	9203	False	NA	-2	True	NA	NA	NA	92426024	92405518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
Isoform_14017_4	chr11	-	1513	8	FSM	ENSMUSG00000018570.18	ENSMUST00000018714.13	1485	8	-25	-3	-6	-2	multi-exon	FALSE	canonical	2	12	junction_7	3.28260722659316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTGGGAGCTGCGTGT	9720	False	NA	-10	True	AATAAA	-18	NA	69791789	69788185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69788319_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
Isoform_140173_480	chr5	-	4986	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	36	-2	1	2	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTCTCCATAA	NA	False	NA	-4	True	AATAAA	-19	NA	92457847	92431866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
Isoform_14018_5	chr11	-	1577	8	NIC	ENSMUSG00000018570.18	novel	1485	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	5.03457433905888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGCTGGGAGCTGCG	9769	False	NA	-13	True	AATAAA	-15	NA	69791740	69788188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69788319_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790753_69791128
Isoform_140185_16	chr5	-	996	8	FSM	ENSMUSG00000029415.5	ENSMUST00000202604.2	996	8	1	-1	1	1	multi-exon	FALSE	canonical	3	305	junction_2	27.4456791885799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAATAAGAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	92457847	92449492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
Isoform_140193_1002	chr5	-	2250	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	96	6	0	-6	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTCTGTCTGGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	92582982	92563404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
Isoform_140194_178	chr5	-	2325	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	26	1	26	-1	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTCTGGTGTTTTATT	NA	False	NA	-1	True	AATAAA	-24	NA	92583052	92563399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
Isoform_140196_67	chr5	-	2353	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	-6	5	-6	-5	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTCTGTCTGGTGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	92583084	92563403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
Isoform_140201_71	chr5	-	2063	11	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	179.096761556428	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTCTGTCTGGTGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	92582982	92563403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92575958_92576186_92578659_92578813_92578897_92578982_92582862
Isoform_140206_180	chr5	-	2036	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	-15	2677	-15	-2677	multi-exon	FALSE	canonical	3	99	junction_7	16.1496104397404	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGGGCCCTGG	NA	False	NA	-6	True	AATAAA	-14	NA	92653511	92591849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
Isoform_140207_89	chr5	-	4711	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	-15	2	-15	-2	multi-exon	TRUE	canonical	3	99	junction_7	16.1496104397404	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCACTGTGAACTGTC	NA	False	NA	-13	True	ATTAAA	-14	NA	92653511	92589174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
Isoform_140218_56	chr5	-	2849	8	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	182.803898498151	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGGTTTGTGTAGGAGT	NA	False	NA	-7	True	AATAAA	-13	NA	93354308	93329796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93351125_93351222_93353772
Isoform_140223_1105	chr5	-	2753	7	FSM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	46	5	-21	-5	multi-exon	FALSE	canonical	3	340	junction_6	48.6052694902746	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGGTTTGTGTAGGAGT	NA	False	NA	-7	True	AATAAA	-13	NA	93354308	93329796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
Isoform_140233_4	chr5	-	4356	12	FSM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	-614	4822	-614	421	multi-exon	TRUE	canonical	3	19	junction_9	8.72253659368072	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAAAGAAAC	NA	False	NA	NA	False	AATAAA	-30	NA	96310463	96223013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309795
Isoform_140235_21	chr5	-	2285	7	FSM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-20	-8	3	8	multi-exon	FALSE	canonical	3	15	junction_1	65.5709962983296	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTCTTCTTCACT	NA	False	NA	NA	False	ATTAAA	-29	NA	97259452	97234830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_97236024_97243770_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
Isoform_140236_5	chr5	-	2816	7	FSM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-54	-505	-31	505	multi-exon	TRUE	canonical	3	15	junction_1	65.5709962983296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGTGTTTGTCCTCTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	97259486	97234333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_97236024_97243770_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
Isoform_140237_25	chr5	-	3670	6	NIC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	3	2661	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	71.4047617459788	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGCCTGCCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	97259452	97241129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_97243920_97245337_97245429_97247404_97247540_97251218_97251375_97256024_97256188_97259117
Isoform_140239_42	chr5	-	3405	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-29	6628	-6	2324	5prime_fragment	FALSE	canonical	3	151	junction_3	20.8096131631513	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTTGTAGTAATGTATA	NA	False	NA	NA	False	ATTAAA	-28	NA	97259461	97241466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
Isoform_140241_12	chr5	-	3631	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-20	6393	3	2559	5prime_fragment	FALSE	canonical	3	151	junction_3	20.8096131631513	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTCCCGCAGCAAG	NA	False	NA	NA	False	AATAAA	-21	NA	97259452	97241231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
Isoform_140245_4	chr5	-	2410	3	FSM	ENSMUSG00000055725.12	ENSMUST00000112968.2	1875	3	-33	-502	-33	502	multi-exon	FALSE	canonical	3	177	junction_1	19	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAAAAATAAACC	NA	False	NA	NA	False	AAGAAA	-10	NA	97259488	97249498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_97251375_97256024_97256188_97259117
Isoform_140246_95	chr5	-	3426	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	-1	-1	-1	1	multi-exon	FALSE	canonical	3	176	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGTTAATAACATT	NA	False	NA	-2	True	AATAAA	-20	NA	97540239	97530055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_97532729_97539486
Isoform_140247_190	chr5	-	3366	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	59	-1	59	1	multi-exon	FALSE	canonical	3	176	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGTTAATAACATT	NA	False	NA	-2	True	AATAAA	-20	NA	97540179	97530055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_97532729_97539486
Isoform_140262_11	chr5	-	4765	20	NNC	ENSMUSG00000029334.15	novel	4968	19	NA	NA	-153	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.48025920894531	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAACCATGTGTGTCA	NA	False	NA	-6	True	ATTAAA	-21	NA	99185047	99077639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_99079078_99079109_99079965_99082187_99082255_99090012_99090076_99091272_99091396_99095229_99095394_99114370_99114513_99115585_99115676_99117795_99117933_99119710_99119865_99120966_99121066_99124294_99124364_99127624_99127720_99128944_99129023_99136145_99136210_99140175_99140282_99142390_99142505_99145204_99145372_99172252_99172727_99184781
Isoform_140265_5	chr5	-	2960	14	FSM	ENSMUSG00000089809.10	ENSMUST00000168092.8	2987	14	27	0	27	0	multi-exon	FALSE	canonical	1	1	junction_13	1.81707874015657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGAGTTGTGGCGTCTT	NA	False	NA	-1	True	AATACA	-15	NA	99400759	99365284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_99366658_99369219_99369293_99370176_99370301_99370798_99370895_99375846_99375943_99377179_99377260_99379949_99380053_99380160_99380257_99381773_99381849_99382334_99382548_99388681_99388820_99389267_99389391_99390922_99391106_99400572
Isoform_140266_4	chr5	-	2932	14	FSM	ENSMUSG00000089809.10	ENSMUST00000031276.15	2990	14	62	-4	62	4	multi-exon	FALSE	canonical	0	0	junction_10	2.0897042626471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTGTGGCGTCTTCTTT	NA	False	NA	3	True	AATACA	-19	NA	99400724	99365280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_99366658_99369219_99369293_99370176_99370301_99370798_99370895_99375846_99375943_99377179_99377260_99379949_99380053_99380160_99380257_99381773_99381849_99382334_99382551_99388681_99388820_99389267_99389391_99390922_99391106_99400572
Isoform_140283_1215	chr5	-	1728	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	11	5072	7	-4	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126786	100108865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_140284_245	chr5	-	1762	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-22	5071	-22	-3	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126819	100108864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_140300_851	chr5	-	1669	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	-8	9	-8	-4	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126784	100108865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
Isoform_140305_221	chr5	-	1705	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	-43	8	-22	-3	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126819	100108864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
Isoform_140320_95	chr5	-	1614	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	-23	409	-22	-4	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126819	100108865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_140321_456	chr5	-	1580	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	12	408	-8	-3	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126784	100108864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_140330_215	chr5	-	1522	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	10	5	-8	-4	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126784	100108865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
Isoform_140331_153	chr5	-	1557	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	-25	5	-22	-4	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126819	100108865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
Isoform_140350_125	chr5	-	2908	8	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	8	-4	intron_retention	FALSE	canonical	3	2301	junction_6	866.95323885856	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126785	100108865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_140352_77	chr5	-	2851	7	NIC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	8	-4	intron_retention	FALSE	canonical	3	1800	junction_6	957.186270041289	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126785	100108865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
Isoform_140354_48	chr5	-	2761	7	NIC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	8	-4	intron_retention	FALSE	canonical	3	1409	junction_1	1230.02173648364	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126785	100108865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_140366_29	chr5	-	2381	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	-231	-1	-231	1	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCCTGCGTCAGGTA	NA	False	NA	-19	True	AATAAA	-16	NA	100187754	100182584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140370_45	chr5	-	1401	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	754	-6	-15	0	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140372_13	chr5	-	2545	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	754	-1150	-15	0	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100186769	100181435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140378_20	chr5	-	2397	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-201	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_7	355.117974073693	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187724	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
Isoform_140380_15	chr5	-	2586	8	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_7	355.117974073693	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100186769	100181435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
Isoform_140382_96	chr5	-	2251	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-643	1144	-201	0	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187724	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140383_22	chr5	-	3370	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-626	8	-184	-8	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATCTCAGTTAAGT	NA	False	NA	-22	True	AATAAA	-10	NA	100187707	100181443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140386_21	chr5	-	2282	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-674	1144	-232	0	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187755	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140387_166	chr5	-	1296	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	312	1144	-15	0	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_14039_496	chr11	-	1367	7	FSM	ENSMUSG00000078812.11	ENSMUST00000043419.10	1437	7	69	1	69	-1	multi-exon	FALSE	canonical	3	627	junction_6	9644.56352477049	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCCAACTCAGTTGTTT	6340	False	NA	-16	True	AATAAA	-19	NA	69812143	69807546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811988
Isoform_140390_153	chr5	-	2431	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	312	9	-15	-9	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100186769	100181444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140402_39	chr5	-	2051	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	230	junction_1	297.206243239284	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140403_19	chr5	-	3186	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	-9	intron_retention	FALSE	canonical	3	230	junction_1	297.206243239284	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100186769	100181444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140415_25	chr5	-	2561	7	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	110	junction_6	363.263181300953	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
Isoform_140417_28	chr5	-	3401	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-1027	0	-232	0	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187755	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140418_147	chr5	-	2415	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-41	0	-15	0	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140421_25	chr5	-	3550	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-41	-1135	-15	-9	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100186769	100181444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140428_19	chr5	-	3438	5	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	934	junction_2	102.524082536739	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
Isoform_140431_31	chr5	-	2700	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	934	junction_2	94.4681957062799	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_140446_4	chr5	+	3046	5	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-12	NA	100509757	100518410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152
Isoform_140449_70	chr5	-	4272	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	10	0	combination_of_known_splicesites	TRUE	canonical	2	51	junction_7	217.697988658871	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8118	False	NA	-7	True	ATTAAA	-19	NA	100564083	100509507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140464_1012	chr5	-	4179	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	466	junction_5	100.698448422967	1012	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8117	False	NA	-8	True	ATTAAA	-18	NA	100564084	100509508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140465_68	chr5	-	4227	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	2	466	junction_5	100.698448422967	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8070	False	NA	-7	True	ATTAAA	-19	NA	100564131	100509507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140466_61	chr5	-	4399	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_26	174.664111296935	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8098	False	NA	-7	True	ATTAAA	-19	NA	100564103	100509507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
Isoform_140469_28	chr5	-	4128	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-20	-2	combination_of_known_splicesites	FALSE	canonical	2	64	junction_13	176.439469507251	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAGTTAGTCTTTATT	8088	False	NA	-10	True	ATTAAA	-16	NA	100564113	100509510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140471_50	chr5	-	4104	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	64	junction_13	176.439469507251	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8115	False	NA	-7	True	ATTAAA	-19	NA	100564086	100509507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140474_55	chr5	-	4071	25	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	48	junction_13	182.154238673347	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8109	False	NA	-7	True	ATTAAA	-19	NA	100564092	100509507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140477_22	chr5	-	4254	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	2	51	junction_7	238.444243093583	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8089	False	NA	-9	True	ATTAAA	-17	NA	100564112	100509509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140478_304	chr5	-	4127	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	2	163	junction_5	145.633410441033	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATCTTATACAGTTAGT	8115	False	NA	-17	True	ATTAAA	-9	NA	100564086	100509517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140482_25	chr5	-	4057	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	64	junction_13	204.849353428318	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATACAGTTAGTCTTTA	8112	False	NA	-12	True	ATTAAA	-14	NA	100564089	100509512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140484_23	chr5	-	4036	25	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	48	junction_13	210.643421548518	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8099	False	NA	-7	True	ATTAAA	-19	NA	100564102	100509507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_140492_3	chr5	-	694	4	ISM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	20	-1	0	1	intron_retention	FALSE	canonical	3	348	junction_3	11.0453610171873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTAGAATGTTGTGTTT	NA	False	NA	-6	True	AATAAA	-32	NA	100577374	100568699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955
Isoform_140493_180	chr5	-	606	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	21	-1	1	1	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTAGAATGTTGTGTTT	NA	False	NA	-6	True	AATAAA	-32	NA	100577373	100568699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
Isoform_140494_49	chr5	-	925	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	20	-319	0	319	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTGGTAAAGATTT	NA	False	NA	-2	True	ATTAAA	-16	NA	100577374	100568381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
Isoform_140496_6	chr5	-	2936	4	NIC	ENSMUSG00000097772.8	novel	626	5	NA	NA	-24	-6	intron_retention	FALSE	canonical	3	343	junction_3	13.0724477007517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAAACATTAGAATGT	NA	False	NA	11	True	AATAAA	-25	NA	100577418	100568706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100568832_100569826_100569901_100574594_100577098_100577184
Isoform_140497_3	chr5	-	1068	6	NNC	ENSMUSG00000097772.8	novel	626	5	NA	NA	0	317	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	170.027527183101	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTTTTTGGTAAAGAT	NA	False	NA	-4	True	ATTAAA	-14	NA	100577375	100568383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_100568832_100569826_100569901_100571146_100571291_100574594_100574664_100576955_100577098_100577184
Isoform_140499_4	chr5	-	6291	3	FSM	ENSMUSG00000097772.8	ENSMUST00000180779.2	3486	3	3	-2808	2	-2	multi-exon	FALSE	canonical	3	343	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATTAGAATGTTGTG	NA	False	NA	-9	True	AATAAA	-29	NA	100577372	100568702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100574664_100576955_100577098_100577184
Isoform_14050_14528	chr11	-	1254	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	88	1	88	-1	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	14528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCCAACTCAGTTGTTT	6359	False	NA	-16	True	AATAAA	-19	NA	69812124	69807546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
Isoform_140504_359	chr5	-	4457	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-5	-1	-5	1	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTTTTGCATTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	100648498	100589898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
Isoform_140509_8	chr5	-	4895	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-3	-441	-3	441	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGTTTCCATTTTTGCT	NA	False	NA	NA	False	AATAAA	-11	NA	100648496	100589458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
Isoform_14051_352	chr11	-	1374	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	-32	1	-32	-1	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCCAACTCAGTTGTTT	9909	False	NA	-16	True	AATAAA	-19	NA	69812244	69807546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
Isoform_140513_63	chr5	-	3792	13	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	48.956542520439	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTTTTGCATTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	100648496	100589898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
Isoform_140521_300	chr5	-	1714	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	29	0	-6	0	multi-exon	FALSE	canonical	3	222	junction_5	48.3206880009887	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822121	100802588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
Isoform_140522_89	chr5	-	1505	6	NIC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	34	-2	combination_of_known_junctions	FALSE	canonical	3	79	junction_5	105.678758508983	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACGCGACTCTTCATTAC	NA	False	NA	-3	True	AATAAA	-18	NA	100822081	100802590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100821854
Isoform_140524_8	chr5	-	1737	6	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_5	129.460418661458	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822112	100802588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811767_100821854
Isoform_140527_15	chr5	-	3099	12	FSM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	17	1	6	-1	multi-exon	FALSE	canonical	2	11	junction_7	2.99862227317648	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCATGGTCATTCTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	100867565	100827350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100828897_100832845_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100846778_100846953_100856522_100856649_100859194_100859341_100867257
Isoform_140529_4	chr5	-	3698	18	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	15.7835708021485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946466	100910016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
Isoform_140530_73	chr5	-	3685	18	FSM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	-2	6	-2	0	multi-exon	FALSE	canonical	3	40	junction_16	11.2714232774287	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946466	100910016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
Isoform_140531_3	chr5	-	3505	17	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	17.3258071601297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946466	100910017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100944219_100944929_100946159
Isoform_140533_3	chr5	-	3148	14	NNC	ENSMUSG00000035266.17	novel	2969	16	NA	NA	9	1332	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	19.9282737504922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	100946455	100918081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
Isoform_140535_71	chr5	-	1673	10	FSM	ENSMUSG00000035234.19	ENSMUST00000200657.5	1668	10	-8	3	-1	-3	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTAATATCTTATT	NA	False	NA	-6	True	AATAAA	-16	NA	100968814	100953060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
Isoform_140536_5	chr5	-	1601	9	NIC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	1	-531	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	59.6226414627866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGGTGTTTGGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	100968830	100953599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100954356_100954644_100954757_100957419_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
Isoform_140537_4	chr5	-	2140	9	NIC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	0	-4	intron_retention	FALSE	canonical	2	9	junction_2	59.6226414627866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTGTAATATCTTAT	NA	False	NA	-7	True	AATAAA	-15	NA	100968831	100953061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_100954356_100954644_100954757_100957419_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
Isoform_140538_4	chr5	-	2085	10	NNC	ENSMUSG00000035234.19	novel	1657	10	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	non_canonical	2	9	junction_3	76.3558918631838	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTTTGTAATATCTTA	NA	False	NA	-8	True	AATAAA	-14	NA	100968822	100953062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_100953529_100953556_100954356_100954644_100954757_100957419_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100965827_100965865_100966382_100966474_100968696
Isoform_140539_62	chr5	-	2089	10	NNC	ENSMUSG00000035234.19	novel	1657	10	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_1	46.4088114238856	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTTTGTAATATCTTA	NA	False	NA	-8	True	AATAAA	-14	NA	100968814	100953062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_100953529_100953556_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
Isoform_140544_6	chr5	-	4339	10	NNC	ENSMUSG00000035234.19	novel	1657	10	NA	NA	-1	2245	intron_retention	TRUE	non_canonical	3	44	junction_1	46.4088114238856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTAGTATGTTTCAG	NA	False	NA	NA	False	AATAAA	-37	NA	100968814	100950812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_100953529_100953556_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
Isoform_140545_13	chr5	-	2069	10	NNC	ENSMUSG00000035234.19	novel	2182	10	NA	NA	-1	-2	at_least_one_novel_splicesite	TRUE	non_canonical	3	24	junction_7	63.1666422358987	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTAATATCTTATTT	NA	False	NA	-5	True	AATAAA	-17	NA	100968808	100953059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_100953529_100953556_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100965827_100965865_100966382_100966474_100968696
Isoform_140547_10	chr5	-	3998	3	FSM	ENSMUSG00000035234.19_ENSMUSG00000105607.2	ENSMUST00000145707.2	454	3	-1	-3543	-1	0	multi-exon	FALSE	canonical	3	160	junction_1	27	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100968814	100962075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100965865_100966382_100966474_100968696
Isoform_140548_4	chr5	-	362	2	FSM	ENSMUSG00000035234.19	ENSMUST00000131857.2	358	2	-9	5	-2	-5	multi-exon	FALSE	canonical	3	214	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	TTTAAA	-38	NA	100968815	100966230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100966474_100968696
Isoform_140549_5	chr5	-	2023	9	ISM	ENSMUSG00000043940.16	ENSMUST00000174598.8	10581	65	129046	-356	-999	356	intron_retention	FALSE	canonical	3	14	junction_1	5.88960949469487	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTTGTAAATCTGACT	NA	False	NA	NA	False	AAAAAG	-10	NA	102000378	101983667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088
Isoform_140550_3	chr5	-	1980	8	ISM	ENSMUSG00000043940.16	ENSMUST00000174598.8	10581	65	129046	7422	-999	-7422	intron_retention	FALSE	canonical	3	26	junction_4	2.9623487647611	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGGACAGTTTAGGAATG	NA	False	NA	NA	False	TTTAAA	-44	NA	102000378	101991445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088
Isoform_140551_3	chr5	-	3048	15	NNC	ENSMUSG00000043940.16	novel	10581	65	NA	NA	-10439	-7429	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	7.24780051083761	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTTCCGGACAGTTT	8573	False	NA	NA	False	TTTAAA	-37	NA	102009818	101991452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102009440
Isoform_140552_3	chr5	-	3959	17	ISM	ENSMUSG00000043940.16	ENSMUST00000053177.14	14274	67	-17	96350	-17	0	5prime_fragment	FALSE	canonical	3	36	junction_3	8.74642784226795	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTCCATGGCTTATTT	NA	False	NA	NA	False	NA	NA	NA	102217804	102077171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_102077962_102078693_102078872_102083855_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
Isoform_140554_6	chr5	-	2727	13	ISM	ENSMUSG00000043940.16	ENSMUST00000174698.2	3858	16	-20	11859	-20	-6084	5prime_fragment	FALSE	canonical	3	36	junction_8	9.24962461700774	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACAACAAGGGCATTCTT	NA	False	NA	NA	False	NA	NA	NA	102217807	102089030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
Isoform_140555_4	chr5	-	2777	7	NNC	ENSMUSG00000029321.2	novel	2124	6	NA	NA	-11438	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.763762615825973	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTACCAACCAGAACCC	6480	False	NA	NA	False	ATTAAA	-12	NA	103788707	103753589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_103754614_103756846_103757005_103760235_103760409_103765496_103765586_103766221_103766341_103776721_103777741_103788512
Isoform_140558_154	chr5	-	3175	10	FSM	ENSMUSG00000029312.13	ENSMUST00000031254.9	3193	10	-1	19	-1	11	multi-exon	FALSE	canonical	3	103	junction_9	11.7473401244707	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059126	104009934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
Isoform_140561_18	chr5	-	3237	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.6851808644853	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGAAACTACTAG	NA	False	NA	NA	False	AATAAA	-20	NA	104059133	104009941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058919
Isoform_140563_8	chr5	-	3242	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-1	11	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	46.2520269826091	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059126	104009934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104038580_104038648_104058981
Isoform_140566_46	chr5	-	3166	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	28.2991078688506	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGGAAACTACTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	104059126	104009940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034154_104058981
Isoform_140568_10	chr5	-	3215	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	18	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	39.3813266522205	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059107	104009934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034154_104058919
Isoform_140570_3	chr5	-	1732	7	FSM	ENSMUSG00000029311.17	ENSMUST00000031251.16	1825	7	83	10	2	-10	multi-exon	FALSE	canonical	0	0	junction_2	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTATCTGTCTCTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	104169702	104137637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_104138461_104140683_104140801_104151037_104151176_104156444_104156552_104157660_104157793_104166039_104166148_104169395
Isoform_140573_13	chr5	-	2636	5	FSM	ENSMUSG00000072774.11	ENSMUST00000186219.7	2904	5	270	-2	-7	2	multi-exon	FALSE	canonical	3	35	junction_4	90.557647385519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGAATTGTGCGTTTG	NA	False	NA	-7	True	NA	NA	NA	105007666	104961032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
Isoform_140574_3	chr5	-	2704	5	FSM	ENSMUSG00000072774.11	ENSMUST00000186219.7	2904	5	31	169	31	-169	multi-exon	FALSE	canonical	3	35	junction_4	90.557647385519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTTTGAATGTAGTCA	NA	False	NA	NA	False	NA	NA	NA	105007905	104961203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
Isoform_140575_35	chr5	-	2788	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	73	2	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGAATTGTGCGTTTG	NA	False	NA	-7	True	NA	NA	NA	105007863	104961032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
Isoform_140577_76	chr5	-	2589	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGGAATTGTGCGTTT	NA	False	NA	-8	True	NA	NA	NA	105007665	104961033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
Isoform_140578_19	chr5	-	2830	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	31	2	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGAATTGTGCGTTTG	NA	False	NA	-7	True	NA	NA	NA	105007905	104961032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
Isoform_140584_4	chr5	-	3309	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	70	520	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTCCAGTCTCTATTGT	NA	False	NA	NA	False	NA	NA	NA	105007866	104960514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
Isoform_140585_3	chr5	-	1926	2	FSM	ENSMUSG00000072774.11	ENSMUST00000191135.2	1923	2	3	-6	3	6	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTGTTTCCCAGGAA	NA	False	NA	NA	False	AATAAA	-17	NA	105007656	104983579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_104985382_105007532
Isoform_140587_5	chr5	-	5726	6	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	-28	0	intron_retention	FALSE	canonical	3	8	junction_5	39.6333193159493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106843906	106764607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843663
Isoform_140588_4	chr5	-	5781	6	FSM	ENSMUSG00000049606.17	ENSMUST00000112696.8	5785	6	0	4	0	1	multi-exon	FALSE	canonical	3	25	junction_5	33.3742415644161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCTCTAATGTGAA	NA	False	NA	-18	True	AATAAA	-15	NA	106844696	106764608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844397
Isoform_140589_5	chr5	-	5611	6	FSM	ENSMUSG00000049606.17	ENSMUST00000112696.8	5785	6	179	-5	-1	5	multi-exon	FALSE	canonical	3	25	junction_5	33.3742415644161	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTGAAACATTTGTT	NA	False	NA	-9	True	AATAAA	-24	NA	106844517	106764599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844397
Isoform_140591_4	chr5	-	5722	5	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_4	41.2492424172857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844696	106764606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106844397
Isoform_140592_4	chr5	-	5468	5	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	15	junction_4	41.2492424172857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844443	106764607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106844397
Isoform_140594_6	chr5	-	4986	5	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	11	0	intron_retention	FALSE	canonical	3	25	junction_4	36.9188298839495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844505	106764606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106844397
Isoform_140595_22	chr5	-	6078	17	FSM	ENSMUSG00000029287.15	ENSMUST00000031224.15	6087	17	8	1	8	-1	multi-exon	FALSE	canonical	3	17	junction_8	3.80788655293195	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTCATATCTGGTCA	285	False	NA	-6	True	AATAAA	-19	NA	107437487	107254436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_107257624_107266284_107266393_107269225_107269274_107278326_107278445_107280598_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758_107362944_107414059_107414217_107437120
Isoform_140599_4	chr5	-	2179	19	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_18	63.7616123531749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAAAATTGCATAATTC	NA	False	NA	NA	False	CATAAA	-23	NA	107745421	107696836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745157
Isoform_140601_117	chr5	-	1928	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	30	57	30	0	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTCATTATACTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	107745475	107696889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
Isoform_140602_97	chr5	-	1985	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	30	0	30	0	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGCATAATTCTTTT	NA	False	NA	NA	False	CATAAA	-27	NA	107745475	107696832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
Isoform_140603_4	chr5	-	2082	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	32	-99	-30	99	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGGAGAGATCACTC	NA	False	NA	NA	False	AGTAAA	-16	NA	107745473	107696733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
Isoform_140604_21	chr5	-	1999	19	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	-4	11	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	56.5136550744733	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTATACCACCATAAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	107745509	107696876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745409
Isoform_140606_3	chr5	-	1338	6	ISM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	20	24121	20	-808	5prime_fragment	FALSE	canonical	3	217	junction_2	26.7536913340944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGGACAGTACTGAATT	NA	False	NA	NA	False	AATAAA	-31	NA	107745485	107720953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
Isoform_140612_30	chr5	-	6263	20	NIC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	21	-4	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATGTCCTTAGAT	NA	False	NA	-5	True	ATTAAA	-15	NA	108017013	107892664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
Isoform_140613_77	chr5	-	6163	20	NIC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	121	-4	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATGTCCTTAGAT	NA	False	NA	-5	True	ATTAAA	-15	NA	108016913	107892664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
Isoform_140624_105	chr5	-	5987	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	121	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108016913	107892660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
Isoform_140625_34	chr5	-	6074	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	32	-2	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTATGTCCTTAGATTA	NA	False	NA	-3	True	ATTAAA	-17	NA	108017002	107892662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
Isoform_140640_51	chr5	-	1809	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	1	911	1	739	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATTTACTGTGTACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	108134950	108056829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
Isoform_140641_59	chr5	-	1757	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	53	911	1	739	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATTTACTGTGTACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	108134898	108056829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
Isoform_140642_5	chr5	-	2721	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTTGATCAATATGTTT	NA	False	NA	NA	False	NA	NA	NA	108134951	108055918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
Isoform_140651_3	chr5	-	3004	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	53	-336	1	336	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGCAATTGTCATGC	NA	False	NA	NA	False	NA	NA	NA	108134898	108055582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
Isoform_140655_175	chr5	-	3717	5	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.214622294571	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	False	NA	0	True	AATAAA	-31	NA	108280429	108269492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_108271806_108271831_108272626_108273766_108273951_108277883_108277982_108280101
Isoform_140659_73	chr5	-	3797	5	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.214622294571	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	False	NA	0	True	AATAAA	-31	NA	108280509	108269492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_108271806_108271831_108272626_108273766_108273951_108277883_108277982_108280101
Isoform_14066_20	chr11	-	2595	11	FSM	ENSMUSG00000018566.15	ENSMUST00000018710.13	2524	11	-72	1	-33	-1	multi-exon	FALSE	canonical	3	12	junction_2	3.57910603363466	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGAGTGTCCTGTGCTGG	NA	False	NA	1	True	ATTAAA	-39	NA	69839047	69833369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69834399_69834884_69835089_69835612_69835715_69835827_69835933_69836094_69836283_69836388_69836552_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
Isoform_140678_7	chr5	-	3580	4	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	-5	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.849391845785	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTTACCAACCTATCATA	NA	False	NA	-15	True	AATAAA	-16	NA	108280491	108269507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_108271806_108271831_108272626_108277883_108277982_108280101
Isoform_140683_1365	chr5	-	298	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	64	9	13	-7	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGGCTTCCTCTCTCT	5566	False	NA	-9	True	AATAAA	-15	NA	108582250	108581118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
Isoform_140684_66	chr5	-	333	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	29	9	-22	-7	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGGCTTCCTCTCTCT	5531	False	NA	-9	True	AATAAA	-15	NA	108582285	108581118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
Isoform_140685_19	chr5	-	2137	4	FSM	ENSMUSG00000033615.10	ENSMUST00000046892.10	2189	4	47	5	23	-5	multi-exon	FALSE	canonical	3	7	junction_1	1.4142135623731	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGGCTATTCCTTCCA	NA	False	NA	-5	True	AATAAA	-14	NA	108697843	108666424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108668193_108673257_108673434_108696371_108696476_108697754
Isoform_14069_34	chr11	-	1241	7	FSM	ENSMUSG00000018565.18	ENSMUST00000123701.9	1259	7	19	-1	17	1	multi-exon	FALSE	canonical	3	523	junction_1	38.6393581727233	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTGGTAATGCTTAA	9908	False	NA	-3	True	AATAAA	-27	NA	69871070	69859052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824
Isoform_14070_439	chr11	-	1106	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	989	3	0	1	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTGGTAATGCTTAA	9889	False	NA	-3	True	AATAAA	-27	NA	69871089	69859052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_14071_20	chr11	-	1888	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	204	6	204	-2	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAACCTCTGGTAATGCT	9104	False	NA	-6	True	AATAAA	-24	NA	69871874	69859055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_140711_566	chr5	-	4463	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	-11	1	5	-1	multi-exon	FALSE	canonical	3	318	junction_10	27.4864725426801	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	False	NA	-29	True	ATTAAA	-22	NA	108777616	108717280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
Isoform_140715_21	chr5	-	4289	26	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_24	73.7455517302569	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777616	108717279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108772895_108772958_108777366
Isoform_140716_14	chr5	-	4315	27	FSM	ENSMUSG00000062234.15	ENSMUST00000135225.8	4310	27	-11	6	5	0	multi-exon	FALSE	canonical	3	15	junction_23	73.3495017589351	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777616	108717285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108771125_108771241_108772048_108772109_108772895_108772958_108777366
Isoform_14072_94	chr11	-	1389	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	706	3	150	1	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTGGTAATGCTTAA	9606	False	NA	-3	True	AATAAA	-27	NA	69871372	69859052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_140721_36	chr5	-	4647	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	0	intron_retention	FALSE	canonical	3	318	junction_9	27.9418246027381	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777616	108717279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
Isoform_140724_59	chr5	-	4557	23	FSM	ENSMUSG00000004815.13	ENSMUST00000053913.13	4938	23	27	354	27	0	multi-exon	FALSE	canonical	3	33	junction_4	9.2499720794754	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808650	108794912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
Isoform_140726_4	chr5	-	4908	23	FSM	ENSMUSG00000004815.13	ENSMUST00000053913.13	4938	23	40	-10	40	10	multi-exon	FALSE	canonical	3	33	junction_4	9.2499720794754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTGCAAAGTGTGAACAA	NA	False	NA	NA	False	AATAAA	-21	NA	108808637	108794548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
Isoform_140729_17	chr5	-	662	2	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	898	-3	898	1	intron_retention	FALSE	canonical	3	615	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGGCCAGCCATCATT	NA	False	NA	-10	True	NA	NA	NA	109703441	109702577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_109702937_109703138
Isoform_140730_237	chr5	-	515	3	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	898	-5	898	-1	3prime_fragment	FALSE	canonical	3	516	junction_2	49.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCGGCCAGCCATCATTAA	NA	False	NA	-8	True	NA	NA	NA	109703441	109702575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_109702937_109703138_109703224_109703372
Isoform_140733_38	chr5	-	855	5	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	2393	0	-70	0	3prime_fragment	FALSE	canonical	1	50	junction_4	239.958720408324	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109704409	109702574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285
Isoform_140735_37	chr5	-	1032	5	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	2215	1	-248	-1	3prime_fragment	FALSE	canonical	1	50	junction_4	239.958720408324	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCGGCCAGCCATCATTAA	NA	False	NA	-8	True	NA	NA	NA	109704587	109702575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285
Isoform_140737_24	chr5	-	1249	7	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	1210	1	1210	-1	3prime_fragment	FALSE	canonical	1	48	junction_6	234.65719677862	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCGGCCAGCCATCATTAA	NA	False	NA	-8	True	NA	NA	NA	109705592	109702575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383
Isoform_140740_25	chr5	-	1326	8	FSM	ENSMUSG00000033467.13	ENSMUST00000044579.12	1323	8	0	-3	0	-1	multi-exon	FALSE	canonical	1	25	junction_7	229.794229159703	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCGGCCAGCCATCATTAA	NA	False	NA	-8	True	NA	NA	NA	109706859	109702575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706670
Isoform_140742_8	chr5	-	1479	8	FSM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	-76	2	-19	2	multi-exon	FALSE	canonical	1	3	junction_7	232.416937104552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGGCCAGCCATCATTA	NA	False	NA	-9	True	NA	NA	NA	109706878	109702576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705616_109706670
Isoform_140747_7	chr5	-	539	3	NIC	ENSMUSG00000033467.13	novel	812	5	NA	NA	360	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_2	278.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGGCCAGCCATCATT	NA	False	NA	-10	True	NA	NA	NA	109703979	109702577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_109702937_109703138_109703224_109703884
Isoform_140750_48	chr5	-	3106	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	237	-2	237	2	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTCATGGTATCTT	6368	False	NA	-1	True	NA	NA	NA	109838670	109822408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
Isoform_140751_4	chr5	-	450	3	ISM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	186	3827	186	-3827	5prime_fragment	FALSE	canonical	3	55	junction_1	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTCAATGTCAGGTGTC	6317	False	NA	NA	False	NA	NA	NA	109838721	109826237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_109826441_109826628_109826756_109838601
Isoform_140752_62	chr5	-	2591	4	FSM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	-116	-474	-116	474	multi-exon	FALSE	canonical	3	85	junction_1	29.0631496343164	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATAGCCATATGCCTTTT	7830	False	NA	NA	False	NA	NA	NA	109899579	109883381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_109885666_109886815_109886877_109887064_109887192_109899460
Isoform_140753_4	chr5	-	2755	4	FSM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	-280	-474	9	474	multi-exon	FALSE	canonical	3	85	junction_1	29.0631496343164	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATAGCCATATGCCTTTT	7666	False	NA	NA	False	NA	NA	NA	109899743	109883381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_109885666_109886815_109886877_109887064_109887192_109899460
Isoform_140756_17	chr5	-	448	3	FSM	ENSMUSG00000072762.10	ENSMUST00000100937.4	599	3	181	-30	-108	30	multi-exon	FALSE	canonical	3	125	junction_2	15.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCAATGTCAGGTGTCT	7838	False	NA	NA	False	NA	NA	NA	109899571	109886666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_109886877_109887064_109887192_109899460
Isoform_140758_9	chr5	-	2450	4	NNC	ENSMUSG00000090963.3	novel	1776	4	NA	NA	-11561	597	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6.94422221866655	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	110205913	110193407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_110195551_110196887_110196949_110197131_110197259_110205794
Isoform_14076_8	chr11	-	882	7	FSM	ENSMUSG00000018565.18	ENSMUST00000142788.8	899	7	9	8	0	-2	multi-exon	FALSE	canonical	3	37	junction_4	199.487468278085	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAACCTCTGGTAATGCT	9889	False	NA	-6	True	AATAAA	-24	NA	69871089	69859055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69870655_69870737_69870824_69870886_69871039
Isoform_140764_13	chr5	-	2477	7	FSM	ENSMUSG00000033434.16	ENSMUST00000127628.6	1481	7	-993	-3	2	-1	multi-exon	FALSE	canonical	3	206	junction_1	14.1234635349203	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256061	110251841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518
Isoform_140769_10	chr5	-	1745	9	ISM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	526	4	40	0	3prime_fragment	FALSE	canonical	3	93	junction_7	47.9386000525672	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110255537	110251844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925
Isoform_140771_7	chr5	-	1439	10	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	35	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	76.178315828516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110255542	110251841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255377
Isoform_140772_205	chr5	-	1614	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	2	1	2	-1	multi-exon	FALSE	canonical	3	93	junction_7	48.631900316511	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256061	110251841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
Isoform_140773_17	chr5	-	1739	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	-123	1	-123	-1	multi-exon	FALSE	canonical	3	93	junction_7	48.631900316511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256186	110251841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
Isoform_140775_9	chr5	-	1405	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	80.7902297588625	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256061	110251841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110255721
Isoform_140776_7	chr5	-	1865	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	8	1	intron_retention	FALSE	canonical	3	179	junction_7	22.3597670755639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110255569	110251842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925
Isoform_140778_32	chr5	-	1672	9	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	150	junction_8	32.0497659897853	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256034	110251842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
Isoform_140779_20	chr5	-	1818	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	150	junction_7	31.16185527997	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256061	110251842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110255064_110255721
Isoform_14078_17	chr11	-	924	7	NIC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	199.363710060003	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTGGTAATGCTTAA	9889	False	NA	-3	True	AATAAA	-27	NA	69871089	69859052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69859367_69859921_69860023_69860318_69860415_69865865_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_140780_10	chr5	-	1754	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	150	junction_7	32.2332063536462	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256026	110251841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110252035_110252133_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
Isoform_140784_648	chr5	-	2013	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	24	7	-9	-7	multi-exon	FALSE	canonical	3	390	junction_2	111.169420255752	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTGTTTATTTGTTT	NA	False	NA	-27	True	AATAAA	-11	NA	110417729	110407027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
Isoform_140789_534	chr5	-	2017	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	49	32	-10	-7	multi-exon	FALSE	canonical	3	275	junction_2	153.77594090104	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTGTTTATTTGTTT	NA	False	NA	-27	True	AATAAA	-11	NA	110417730	110407027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
Isoform_140793_111	chr5	-	1074	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	-42	9	-42	4	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	110434094	110422156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
Isoform_140794_222	chr5	-	1037	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	-5	9	-5	4	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	110434057	110422156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
Isoform_140796_7	chr5	-	874	4	FSM	ENSMUSG00000029499.12	ENSMUST00000155266.2	700	4	-170	-4	-5	4	multi-exon	FALSE	canonical	3	34	junction_2	226.6686274425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	110434057	110422156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110422495_110425520_110425641_110431511_110431620_110433749
Isoform_140797_5	chr5	-	4074	4	NIC	ENSMUSG00000029499.12	novel	1041	5	NA	NA	-16	4	intron_retention	FALSE	canonical	3	476	junction_3	22.7596133534821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	110434068	110422156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110425641_110429062_110429226_110431511_110431620_110433749
Isoform_140798_18	chr5	-	707	2	FSM	ENSMUSG00000029499.12	ENSMUST00000126882.2	466	2	-73	-168	-6	168	multi-exon	FALSE	canonical	3	476	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAATAATT	NA	False	NA	NA	False	NA	NA	NA	110434058	110431221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110431620_110433749
Isoform_140803_574	chr5	-	3119	3	FSM	ENSMUSG00000043323.18	ENSMUST00000200293.2	976	3	-26	-2117	-26	-3	multi-exon	FALSE	canonical	3	401	junction_2	98.5	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGTGTCTTATTATTT	NA	False	NA	-4	True	AATAAA	-25	NA	110596395	110577743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110580012_110580766_110580968_110595745
Isoform_140805_55	chr5	-	3178	3	FSM	ENSMUSG00000043323.18	ENSMUST00000200293.2	976	3	-85	-2117	14	-3	multi-exon	FALSE	canonical	3	401	junction_2	98.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGTGTCTTATTATTT	NA	False	NA	-4	True	AATAAA	-25	NA	110596454	110577743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110580012_110580766_110580968_110595745
Isoform_140809_12	chr5	-	3481	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4304	-3	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_2	206	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGTGTCTTATTATTT	NA	False	NA	-4	True	AATAAA	-25	NA	110585491	110577743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_110580012_110580766_110580968_110584479
Isoform_14081_7	chr11	-	460	4	ISM	ENSMUSG00000018565.18	ENSMUST00000147437.3	627	6	2254	-110	0	110	3prime_fragment	FALSE	canonical	3	471	junction_3	38.0525951808809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGCCACCCCTTTCCA	9889	False	NA	NA	False	AATACA	-14	NA	69871089	69865818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_140813_11	chr5	-	3296	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	174.667302797824	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTAGTGTCTTATTATT	NA	False	NA	-5	True	AATAAA	-24	NA	110596395	110577744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_110580012_110580270_110580449_110580766_110580968_110595745
Isoform_140816_1200	chr5	-	1876	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	32	167	-5	-167	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8873	False	NA	-11	True	AATAAA	-15	NA	110801251	110796450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
Isoform_140817_230	chr5	-	1907	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	1	167	1	-167	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8842	False	NA	-11	True	AATAAA	-15	NA	110801282	110796450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
Isoform_140823_29	chr5	-	1958	14	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-5	-167	intron_retention	FALSE	canonical	3	589	junction_8	57.5579975061944	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8873	False	NA	-11	True	AATAAA	-15	NA	110801251	110796450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
Isoform_140826_4	chr5	-	2444	6	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	99452	8	-2268	-3	3prime_fragment	FALSE	canonical	3	109	junction_5	10.9105453575887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTTCTTGTTCTGTCT	NA	False	NA	-8	True	AATAAA	-11	NA	110818941	110812246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740
Isoform_14083_504	chr11	-	2151	20	FSM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	13	4	4	2	multi-exon	FALSE	canonical	3	125	junction_10	16.9960073525513	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCCGTGAATGTCACT	NA	False	NA	0	True	AATAAA	-17	NA	69906221	69901012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
Isoform_140834_4	chr5	-	5673	27	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	74987	6	-3373	-1	3prime_fragment	FALSE	canonical	3	63	junction_25	19.8431721075523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTGTTCTGTCTTA	NA	False	NA	-6	True	AATAAA	-13	NA	110843406	110812244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138
Isoform_140835_14	chr5	-	10893	54	NNC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	45	junction_42	24.8215847913809	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTGTTCTGTCTTAA	NA	False	NA	-5	True	AATAAA	-14	NA	110918467	110812243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_110813597_110813623_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
Isoform_14084_24	chr11	-	2084	19	FSM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	-8	-56	4	1	multi-exon	FALSE	canonical	3	15	junction_17	40.1080331229001	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGCCGTGAATGTCAC	NA	False	NA	-1	True	AATAAA	-16	NA	69906221	69901013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905942_69906022_69906088
Isoform_140843_3	chr5	-	2785	9	NNC	ENSMUSG00000029505.18	novel	10420	52	NA	NA	-8	7851	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	22.6591592959668	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTAGGATTCAATGGG	NA	False	NA	NA	False	AATAGA	-28	NA	110918459	110877686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110916176_110916279_110918357
Isoform_140845_27	chr5	-	2274	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	0	1399	0	-1001	multi-exon	FALSE	canonical	3	52	junction_3	2.77263412660235	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTATTATTGTTGCT	NA	False	NA	NA	False	ATTAAA	-9	NA	110918451	110886936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
Isoform_140846_3	chr5	-	2414	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	-131	1390	1	-992	multi-exon	FALSE	canonical	3	52	junction_3	2.77263412660235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTGCTGTTAGTAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	110918582	110886927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
Isoform_140847_3	chr5	-	2181	4	ISM	ENSMUSG00000029505.18	ENSMUST00000112436.9	10685	51	124	74686	-8	-994	5prime_fragment	FALSE	canonical	3	7	junction_1	21.4527905462721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTTGCTGTTAGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	110918459	110886929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_110887548_110889835_110889927_110903262_110904633_110918357
Isoform_14085_32	chr11	-	2596	4	FSM	ENSMUSG00000044367.8	ENSMUST00000060010.3	2531	4	-65	0	5	0	multi-exon	FALSE	canonical	3	11	junction_2	1.24721912892465	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGATGGTCAAGCTCAG	NA	False	NA	NA	False	NA	NA	NA	70111885	70107614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70108748_70109418_70110157_70111020_70111165_70111304
Isoform_140850_79	chr5	-	1845	7	FSM	ENSMUSG00000029507.17	ENSMUST00000086643.12	1868	7	19	4	14	-3	multi-exon	FALSE	canonical	3	62	junction_4	212.004454879818	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928443	110921536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928105
Isoform_140851_24	chr5	-	1558	7	NIC	ENSMUSG00000029507.17	novel	1868	7	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	232.058481613771	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928478	110921536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928427
Isoform_140853_59	chr5	-	2161	5	ISM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	-9	4	-9	-3	intron_retention	FALSE	canonical	3	492	junction_3	32.6448694284416	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928471	110921536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552
Isoform_140856_546	chr5	-	1801	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	9	4	4	-3	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928453	110921536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
Isoform_140857_20	chr5	-	2961	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	19	-1166	14	1166	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTGTGTGAGTG	NA	False	NA	-7	True	AATAAA	-11	NA	110928443	110920366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
Isoform_140860_22	chr5	-	1505	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031481.13	1563	6	54	4	-9	-3	multi-exon	FALSE	canonical	3	14	junction_5	204.990146104636	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928471	110921536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928419
Isoform_140861_235	chr5	-	1505	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	0	5	0	-5	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATTCTTTGCCTATTT	NA	False	NA	-5	True	ATTAAA	-16	NA	110928481	110921538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
Isoform_140865_25	chr5	-	1653	5	NIC	ENSMUSG00000029507.17	novel	1814	6	NA	NA	14	-3	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	214.321020900891	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928443	110921536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928105
Isoform_140866_15	chr5	-	1356	5	NIC	ENSMUSG00000029507.17	novel	1510	6	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	246.215733656483	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928468	110921536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928427
Isoform_14090_104	chr11	-	876	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108578.9	880	6	3	1	1	-1	multi-exon	FALSE	canonical	3	195	junction_1	133.830340356737	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128737	70126032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_140905_399	chr5	-	5244	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	-32	1	-32	-1	multi-exon	FALSE	canonical	3	530	junction_12	186.450389110485	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957995	110932354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
Isoform_140910_16	chr5	-	5277	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	-65	1	-65	-1	multi-exon	FALSE	canonical	3	530	junction_12	186.450389110485	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110958028	110932354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
Isoform_140918_164	chr5	-	5186	28	FSM	ENSMUSG00000029512.12	ENSMUST00000200299.2	3581	28	0	-1605	0	-1	multi-exon	TRUE	canonical	3	128	junction_11	217.248929557064	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
Isoform_140919_65	chr5	-	5262	28	FSM	ENSMUSG00000029512.12	ENSMUST00000200299.2	3581	28	-76	-1605	-32	-1	multi-exon	FALSE	canonical	3	128	junction_11	217.248929557064	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957995	110932354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
Isoform_14092_15	chr11	-	773	5	FSM	ENSMUSG00000020831.19	ENSMUST00000102569.10	778	5	1	4	-1	-2	multi-exon	FALSE	canonical	3	142	junction_3	164.364495862093	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATGGTGCTGCCAGCT	NA	False	NA	-16	True	ATTAAA	-11	NA	70128739	70126035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70128356_70128452_70128609
Isoform_140927_20	chr5	-	773	6	NIC	ENSMUSG00000043510.13	novel	804	6	NA	NA	27	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	141.291754890369	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTCTGCTAATTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	110987616	110976944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110977078_110978801_110978850_110982520_110982666_110983840_110983936_110984172_110984270_110987361
Isoform_140928_196	chr5	-	768	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	27	9	27	1	multi-exon	FALSE	canonical	3	311	junction_3	42.8691030930203	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTCTGCTAATTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	110987616	110976944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
Isoform_140929_107	chr5	-	794	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	1	9	1	1	multi-exon	FALSE	canonical	3	311	junction_3	42.8691030930203	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTCTGCTAATTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	110987642	110976944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
Isoform_140931_4	chr5	-	738	5	NIC	ENSMUSG00000043510.13	novel	804	6	NA	NA	-33	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	152.686566206723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTCTGCTAATTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	110987676	110976944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110977078_110978801_110978850_110982520_110982666_110984172_110984270_110987361
Isoform_140933_35	chr5	-	569	3	ISM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	27	6783	27	-6772	5prime_fragment	FALSE	canonical	3	372	junction_2	33.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTGTTCTTTGTAAATC	NA	False	NA	NA	False	TTTAAA	-17	NA	110987616	110983718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_110983936_110984172_110984270_110987361
Isoform_140934_24	chr5	-	1114	7	FSM	ENSMUSG00000029346.13	ENSMUST00000031289.7	1110	7	-3	-1	-3	1	multi-exon	FALSE	canonical	3	22	junction_1	42.3848112207926	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490909	112485256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_112485608_112485841_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_140935_9	chr5	-	1189	7	NIC	ENSMUSG00000029346.13	novel	1110	7	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	50.7466473988403	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490889	112485256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_112485608_112485841_112485914_112486183_112486434_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_140936_3	chr5	-	2827	6	ISM	ENSMUSG00000029346.13	ENSMUST00000146510.8	1064	7	-24	-1	-4	1	intron_retention	FALSE	canonical	3	101	junction_3	15.8316139417306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490910	112485256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_112485608_112485867_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961
Isoform_140937_123	chr5	-	1073	7	FSM	ENSMUSG00000029346.13	ENSMUST00000146510.8	1064	7	-8	-1	-8	1	multi-exon	FALSE	canonical	3	101	junction_3	14.8884742894182	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490894	112485256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_112485608_112485867_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_140939_3	chr5	-	3885	5	FSM	ENSMUSG00000029346.13	ENSMUST00000155756.8	871	5	-3014	0	4	0	multi-exon	FALSE	canonical	3	38	junction_3	40.1154583670684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490902	112485257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_112485608_112485867_112485914_112486183_112486434_112487584_112487684_112487762
Isoform_140940_51	chr5	-	1168	7	NIC	ENSMUSG00000029346.13	novel	1064	7	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	36.3168923046379	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490894	112485256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_112485608_112485867_112485914_112486183_112486434_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_140942_3	chr5	-	4054	4	NIC	ENSMUSG00000029346.13	novel	1110	7	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	101	junction_2	16.5126214353344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGGTTTACAGTGCT	NA	False	NA	-9	True	AATAGA	-12	NA	112490908	112485259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_112485914_112486183_112486339_112487584_112487684_112487762
Isoform_140944_8	chr5	-	1429	6	FSM	ENSMUSG00000029346.13	ENSMUST00000156083.8	837	6	-10	-582	-8	2	multi-exon	FALSE	canonical	3	38	junction_2	39.7461947864195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTACAGTGCTGTTT	NA	False	NA	-5	True	AATAGA	-16	NA	112490894	112485255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_112485914_112486183_112486434_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_140945_6	chr5	-	1754	4	NIC	ENSMUSG00000029348.12	novel	2678	3	NA	NA	11	-14	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	11.1455023315337	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTCTAAATGTAATC	NA	False	NA	-15	True	AATAGA	-14	NA	112542721	112533323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_112533728_112534624_112534739_112539023_112540122_112542583
Isoform_140947_3	chr5	-	727	2	NNC	ENSMUSG00000058153.16	novel	4998	15	NA	NA	52802	290	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTCCTCTAAAAGGTC	7724	False	NA	NA	False	ATTAAA	-14	NA	112570191	112569388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_112569905_112569980
Isoform_140949_33	chr5	-	6528	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	1	4	1	-4	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGGCTTGAGGCTGA	540	False	NA	-8	True	AATAAA	-14	NA	113163379	113058351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
Isoform_14095_23	chr11	-	773	5	NIC	ENSMUSG00000020831.19	novel	880	6	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	187.69523169223	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128739	70126032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_70126291_70126849_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_140953_31	chr5	-	6552	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	-24	5	-24	-5	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGTGGCTTGAGGCTG	515	False	NA	-9	True	AATAAA	-13	NA	113163404	113058352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
Isoform_140954_7	chr5	-	6569	21	FSM	ENSMUSG00000042249.12	ENSMUST00000200332.5	4455	21	0	-2114	0	-3	multi-exon	FALSE	canonical	1	4	junction_18	18.223885425452	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGGCTTGAGGCTGAC	539	False	NA	-7	True	AATAAA	-15	NA	113163380	113058350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117175_113121372_113121447_113133630_113133708_113163232
Isoform_140955_4	chr5	-	6420	20	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	18.5694772345519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGGCTTGAGGCTGA	540	False	NA	-8	True	AATAAA	-14	NA	113163379	113058351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
Isoform_140957_6	chr5	-	694	4	ISM	ENSMUSG00000029352.15	ENSMUST00000076069.13	816	5	723	0	447	0	3prime_fragment	FALSE	canonical	3	12	junction_2	4.78423336480244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTGTGTCACTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	113227810	113223704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_113223938_113225400_113225544_113226248_113226382_113227625
Isoform_140958_3	chr5	-	2149	3	FSM	ENSMUSG00000029352.15	ENSMUST00000155042.8	1419	3	455	-1185	455	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTGTGTCACTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	113227802	113223704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113225544_113226248_113226382_113227625
Isoform_140960_4	chr5	-	7353	13	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-37	-2919	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	8.71899267882095	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGATCTAGTTGCTTG	NA	False	NA	-2	True	NA	NA	NA	113369139	113237107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113341626_113341774_113369076
Isoform_140962_57	chr5	-	4326	16	FSM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	14	-1	0	1	multi-exon	FALSE	canonical	3	35	junction_5	17.3674024156368	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAACCGTGGGTCTGG	NA	False	NA	-8	True	AATATA	-11	NA	113428453	113391093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
Isoform_140964_19	chr5	-	5120	25	FSM	ENSMUSG00000042216.14	ENSMUST00000048112.13	5161	25	33	8	-14	1	multi-exon	FALSE	canonical	3	12	junction_24	23.4519307425968	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAACCGTGGGTCTGG	NA	False	NA	-8	True	AATATA	-11	NA	113458619	113391093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
Isoform_140965_15	chr5	-	4171	17	NNC	ENSMUSG00000042216.14	novel	5161	25	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	19.3083531146496	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAACCGTGGGTCTGG	NA	False	NA	-8	True	AATATA	-11	NA	113428454	113391093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
Isoform_140966_3	chr5	-	3013	19	ISM	ENSMUSG00000042216.14	ENSMUST00000145708.8	3177	22	22	4796	-16	2765	5prime_fragment	FALSE	canonical	3	12	junction_18	26.868449531875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTCCGGTCAACTCTGC	NA	False	NA	NA	False	NA	NA	NA	113458621	113410774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
Isoform_140967_15	chr5	-	1493	9	ISM	ENSMUSG00000042216.14	ENSMUST00000147856.8	3012	13	14	8201	0	-1	5prime_fragment	FALSE	canonical	3	54	junction_1	14.2280532751322	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTGTCTCCTTGGAAC	NA	False	NA	NA	False	AGTAAA	-16	NA	113428453	113413540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
Isoform_140968_14	chr5	-	1101	5	FSM	ENSMUSG00000042216.14	ENSMUST00000112324.2	1102	5	0	1	0	-1	multi-exon	FALSE	canonical	3	70	junction_3	10.6389614154766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGAGTGGTGTCTGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	113428453	113421818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
Isoform_140969_3	chr5	-	1898	14	ISM	ENSMUSG00000042216.14	ENSMUST00000112325.8	2274	18	-19	8281	-19	-3	5prime_fragment	FALSE	canonical	3	12	junction_13	30.0746605483851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGAGAGTGGTGTCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	113458624	113421820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
Isoform_140970_9	chr5	-	946	6	NNC	ENSMUSG00000042216.14	novel	2274	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	27.2176413379264	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGAGTGGTGTCTGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	113428454	113421818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
Isoform_140971_3	chr5	-	2737	3	NIC	ENSMUSG00000042190.13	novel	391	5	NA	NA	-34	-9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTGACGTCTTGCTTG	NA	False	NA	-9	True	CATAAA	-42	NA	113781698	113750423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_113753002_113754588_113754678_113781628
Isoform_140972_8	chr5	-	2884	3	NNC	ENSMUSG00000042190.13	novel	2882	3	NA	NA	-11329	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGACGTCTTGCTTGTT	5615	False	NA	-7	True	CATAAA	-44	NA	113799816	113750421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_113753002_113754588_113754678_113799601
Isoform_14098_48	chr11	-	882	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108576.10	576	6	-109	-197	-1	-1	multi-exon	FALSE	canonical	3	107	junction_1	159.443532324143	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128739	70126032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70126295_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_140994_1063	chr5	-	3587	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	859	1	-13	-1	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTGCATTGCAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	113909712	113880507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
Isoform_140995_14	chr5	-	3825	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	621	1	-251	-1	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTGCATTGCAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	113909950	113880507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
Isoform_141002_14	chr5	-	3318	19	NNC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-203	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_18	98.1170251143192	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTGCATTGCAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	113910774	113880507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113910712
Isoform_141003_59	chr5	-	3641	19	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_15	91.6478768621147	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTGCATTGCAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	113909712	113880507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897388_113899155_113899341_113900889_113900995_113902133_113902261_113909381
Isoform_141009_3	chr5	-	2136	2	FSM	ENSMUSG00000054675.6	ENSMUST00000067853.6	2242	2	106	0	36	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCTGGATTATCTGCA	6798	False	NA	NA	False	AATAAA	-17	NA	113938471	113931789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113933815_113938360
Isoform_141010_12	chr5	-	1792	3	NNC	ENSMUSG00000048163.14	novel	1855	2	NA	NA	-3	1	intron_retention	TRUE	non_canonical	0	0	junction_1	7	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGATAGCTGAGTCCTTCA	6304	False	NA	NA	False	AATAAA	-13	NA	113968536	113956614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_113957698_113957727_113958310_113968409
Isoform_14102_9	chr11	-	781	5	NIC	ENSMUSG00000020831.19	novel	576	6	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	180.473509136383	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTGCCAGCTGCCGTT	NA	False	NA	-10	True	ATTAAA	-17	NA	70128737	70126029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_70126295_70126521_70126627_70126849_70127038_70128356_70128452_70128609
Isoform_141028_2736	chr5	-	3428	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	63	0	10	0	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	2736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046756	113980496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
Isoform_141031_91	chr5	-	3500	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	-10	1	-10	-1	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTGTGCTGTGCTTCTT	NA	False	NA	NA	False	GATAAA	-14	NA	114046829	113980497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
Isoform_14105_31	chr11	-	793	5	NIC	ENSMUSG00000020831.19	novel	779	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	190.587742260619	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128728	70126032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_70126295_70126822_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_141053_349	chr5	-	3747	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	105	4584	-10	514	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGTTCTGAGAACAATGC	NA	False	NA	-12	True	TATAAA	-16	NA	114131850	114079738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_141055_42	chr5	-	3823	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	27	4586	27	512	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCGTTCTGAGAACAAT	NA	False	NA	-14	True	TATAAA	-14	NA	114131928	114079740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_141056_10	chr5	-	5739	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	21	2676	21	-5	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114131934	114077830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_141059_102	chr5	-	5651	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	105	2680	-10	-9	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114131850	114077834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_141061_13	chr5	-	8325	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	105	6	-10	-6	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCTGTGTATGCTAT	NA	False	NA	-17	True	AATAAA	-13	NA	114131850	114075160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_141062_70	chr5	-	5688	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	105	2643	-10	28	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131850	114077797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_141063_15	chr5	-	5741	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	52	2643	-15	28	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131903	114077797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_141068_27	chr5	-	3821	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6211	515	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTTCTGAGAACAATGCT	NA	False	NA	-11	True	TATAAA	-17	NA	114111028	114079737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
Isoform_14107_9	chr11	-	707	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108575.9	643	4	-65	1	-4	-1	multi-exon	FALSE	canonical	3	53	junction_1	223.35671519393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128744	70126032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70126295_70126822_70127038_70128356_70128452_70128609
Isoform_141070_16	chr5	-	5543	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6026	-5	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114110843	114077830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
Isoform_141071_53	chr5	-	3635	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6026	514	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGTTCTGAGAACAATGC	NA	False	NA	-12	True	TATAAA	-16	NA	114110843	114079738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
Isoform_141079_11	chr5	-	5594	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6044	28	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114110861	114077797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
Isoform_141082_14	chr5	-	3864	16	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	23	511	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	132.256753660782	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTCGTTCTGAGAACAA	NA	False	NA	-15	True	TATAAA	-13	NA	114131865	114079741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114119856_114119962_114127706_114127748_114131724
Isoform_141085_25	chr5	-	3365	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4940	514	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGTTCTGAGAACAATGC	NA	False	NA	-12	True	TATAAA	-16	NA	114099877	114079738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
Isoform_141086_11	chr5	-	5269	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4940	-9	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114099877	114077834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
Isoform_14109_98	chr11	-	766	5	FSM	ENSMUSG00000020831.19	ENSMUST00000021181.13	779	5	12	1	0	-1	multi-exon	FALSE	canonical	3	264	junction_1	106.829303096107	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128728	70126032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_141090_35	chr5	-	2353	9	ISM	ENSMUSG00000042078.15	ENSMUST00000134790.8	1682	15	22236	-1164	-101	-51	3prime_fragment	FALSE	canonical	3	12	junction_8	2.91279504943276	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGATTTAAATCTGGTC	NA	False	NA	2	True	ATTAAA	-21	NA	114181043	114165021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866
Isoform_141094_6	chr5	-	2955	16	FSM	ENSMUSG00000042078.15	ENSMUST00000058472.13	3379	16	370	54	167	-54	multi-exon	FALSE	canonical	1	1	junction_9	7.27552976307109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGGGATTTAAATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	114229261	114165024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866_114180993_114183628_114183693_114192537_114192663_114198118_114198191_114201085_114201185_114202928_114203015_114203586_114203748_114229212
Isoform_141095_8	chr5	-	3005	2	ISM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	10	-8	10	-1	intron_retention	FALSE	canonical	3	557	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	7988	False	NA	-3	True	AATAAA	-21	NA	114266269	114261987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_114262316_114263592
Isoform_141099_4	chr5	-	1119	4	FSM	ENSMUSG00000044339.13	ENSMUST00000053657.13	1073	4	-48	2	-6	-2	multi-exon	FALSE	canonical	1	3	junction_3	257.69534122465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGGGGGGGGTGTGTG	7972	False	NA	-4	True	AATAAA	-20	NA	114266285	114261988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114265936
Isoform_141100_49	chr5	-	1004	4	NIC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	238.844905511692	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	8004	False	NA	-2	True	AATAAA	-22	NA	114266253	114261986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114262316_114263592_114263792_114265586_114265831_114266021
Isoform_141101_271	chr5	-	895	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	12	-8	12	-1	multi-exon	FALSE	canonical	3	267	junction_3	133.312498372141	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	7990	False	NA	-3	True	AATAAA	-21	NA	114266267	114261987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
Isoform_141102_8	chr5	-	2656	4	NNC	ENSMUSG00000044339.13	novel	899	4	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_2	225.449674108337	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	7983	False	NA	-3	True	AATAAA	-21	NA	114266274	114261987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_114262316_114263592_114265396_114265436_114265831_114266143
Isoform_141103_40	chr5	-	3048	10	FSM	ENSMUSG00000042002.12	ENSMUST00000044790.12	3016	10	-32	0	-32	0	multi-exon	FALSE	canonical	2	4	junction_3	3.91893157523298	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTCAGTGTGGA	NA	False	NA	-2	True	AATAAA	-13	NA	114411900	114392224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114393812_114394619_114395013_114396568_114396777_114397810_114397908_114398410_114398539_114398926_114399047_114399135_114399264_114401069_114401216_114411033_114411123_114411748
Isoform_141104_3	chr5	-	3243	10	FSM	ENSMUSG00000042002.12	ENSMUST00000044790.12	3016	10	-227	0	-227	0	multi-exon	FALSE	canonical	2	4	junction_3	3.91893157523298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTCAGTGTGGA	NA	False	NA	-2	True	AATAAA	-13	NA	114412095	114392224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114393812_114394619_114395013_114396568_114396777_114397810_114397908_114398410_114398539_114398926_114399047_114399135_114399264_114401069_114401216_114411033_114411123_114411748
Isoform_141107_246	chr5	-	3065	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	37	1	12	-1	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCCTTCTGGTCTTTTC	NA	False	NA	1	True	AATAAA	-23	NA	114518532	114501628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
Isoform_141110_50	chr5	-	3064	7	FSM	ENSMUSG00000001098.16	ENSMUST00000001125.6	1026	7	12	-2050	12	-5	multi-exon	FALSE	canonical	3	21	junction_4	38.0379927032025	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACGCCGCCTTCTGGTCT	NA	False	NA	-3	True	AATAAA	-19	NA	114518532	114501632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507092_114508119_114508290_114512956_114513171_114518486
Isoform_141113_165	chr5	-	2958	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	47	15	8	-15	multi-exon	TRUE	canonical	3	162	junction_1	19.5604032422647	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTGCCTGGAAGGATT	NA	False	NA	-13	True	AATAAA	-21	NA	114582074	114569109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
Isoform_141116_4	chr5	-	2888	8	NIC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	1	-19	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	69.5715752418518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATCAGTGCCTGGAAG	NA	False	NA	-17	True	AATAAA	-17	NA	114582081	114569113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575878_114575937_114576581_114576676_114580821_114580884_114581936
Isoform_14112_29	chr11	-	675	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108579.8	667	4	-9	1	-1	-1	multi-exon	FALSE	canonical	3	142	junction_2	177.768263634304	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128739	70126032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70126295_70126849_70127038_70128356_70128452_70128609
Isoform_141120_6	chr5	-	1215	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	-76	138	-8	-138	multi-exon	FALSE	canonical	3	177	junction_4	16.4738506458581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAATCCTTCCTTCTGGGT	NA	False	NA	NA	False	AATATA	-19	NA	114582129	114572826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
Isoform_141121_7	chr5	-	4875	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	-21	-3577	8	-17	multi-exon	FALSE	canonical	3	177	junction_4	16.4738506458581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCAGTGCCTGGAAGGA	NA	False	NA	-15	True	AATAAA	-19	NA	114582074	114569111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
Isoform_141123_31	chr5	-	3212	16	FSM	ENSMUSG00000014158.13	ENSMUST00000071968.9	3228	16	12	4	9	1	multi-exon	FALSE	canonical	2	11	junction_12	3.23865541373096	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACAGTGAGGGTGAGGTT	NA	False	NA	NA	False	AATAAA	-16	NA	114796470	114760216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782992_114796402
Isoform_141124_8	chr5	-	3221	16	FSM	ENSMUSG00000014158.13	ENSMUST00000112225.8	3226	16	4	1	4	-1	multi-exon	FALSE	canonical	2	11	junction_12	3.46153466286591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGGGTGAGGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	114796475	114760215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782995_114796402
Isoform_141125_3	chr5	-	3307	17	NNC	ENSMUSG00000014158.13	novel	3226	16	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	5.77575752607396	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTGAGGTTGGAAGTGG	NA	False	NA	NA	False	AATAAA	-24	NA	114796475	114760208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782995_114784280_114784360_114796402
Isoform_141126_3	chr5	-	3055	15	NIC	ENSMUSG00000014158.13	novel	3228	16	NA	NA	7	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	5.16117768557146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACAGTGAGGGTGAGGTT	NA	False	NA	NA	False	AATAAA	-16	NA	114796472	114760216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782992_114796402
Isoform_141130_1944	chr5	-	1709	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	48	5	5	-5	multi-exon	TRUE	canonical	3	1353	junction_4	27.6541136180497	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTGTCTGTGGCGC	NA	False	NA	-2	True	AATAAA	-24	NA	114828997	114807463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
Isoform_141131_264	chr5	-	1794	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	-37	5	-37	-5	multi-exon	FALSE	canonical	3	1353	junction_4	27.6541136180497	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTGTCTGTGGCGC	NA	False	NA	-2	True	AATAAA	-24	NA	114829082	114807463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
Isoform_141136_77	chr5	-	2754	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-11	24	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTTGGATTTAAAAAC	NA	False	NA	NA	False	AGTAAA	-19	NA	114911567	114867906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141138_54	chr5	-	3025	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911567	114867635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141142_11	chr5	-	5188	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCATGTGCCCCCTCTA	NA	False	NA	-6	True	AATAAA	-17	NA	114911565	114865470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141145_43	chr5	-	3029	20	FSM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	-45	0	-12	0	multi-exon	FALSE	canonical	3	71	junction_12	54.5305322490843	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911568	114867635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141151_6	chr5	-	2705	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-12	19	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	61.2872533551857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAGAAAGTTGGATTTA	NA	False	NA	NA	False	AGTAAA	-14	NA	114911568	114867911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881836_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141155_33	chr5	-	2876	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	-12	2168	-12	0	multi-exon	FALSE	canonical	3	90	junction_6	46.75943160951	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911568	114867635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141161_22	chr5	-	2879	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911568	114867635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141162_33	chr5	-	2608	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-12	24	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTTGGATTTAAAAAC	NA	False	NA	NA	False	AGTAAA	-19	NA	114911568	114867906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141165_7	chr5	-	5067	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-28	4	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCCCTCTAGTTGGTG	NA	False	NA	1	True	AATAAA	-24	NA	114911584	114865463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141166_22	chr5	-	2655	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-2	24	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTTGGATTTAAAAAC	NA	False	NA	NA	False	AGTAAA	-19	NA	114911558	114867906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141169_15	chr5	-	2936	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911568	114867635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_14117_357	chr11	-	617	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	-7	1	-7	-1	multi-exon	FALSE	canonical	3	718	junction_2	4	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGCTGTCTGTGCTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	70130675	70128950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70129297_70129763_70129841_70130481
Isoform_141172_17	chr5	-	2937	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	64.898900483372	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATGTCTCCATAATG	NA	False	NA	-3	True	TATAAA	-13	NA	114911567	114867636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141176_9	chr5	-	2777	18	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	59.1705060729358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911559	114867635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141177_18	chr5	-	2544	18	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	-10	55	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	59.1705060729358	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGCAGCAGCAGCAGCA	NA	False	NA	NA	False	AAGAAA	-27	NA	114911566	114867875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141180_15	chr5	-	2789	18	FSM	ENSMUSG00000041890.18	ENSMUST00000043283.14	4938	18	-15	2164	-12	0	multi-exon	FALSE	canonical	3	47	junction_4	65.8330172418791	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911568	114867635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141182_6	chr5	-	1948	9	ISM	ENSMUSG00000041890.18	ENSMUST00000155908.8	2338	18	-14	21421	-14	2961	5prime_fragment	FALSE	canonical	3	71	junction_1	61.3564126640403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTCTCTGTGTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	114911570	114889351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141183_11	chr5	-	689	5	ISM	ENSMUSG00000041890.18	ENSMUST00000153756.8	2091	12	-14	17215	-14	8	5prime_fragment	FALSE	canonical	3	229	junction_4	20.2036506602149	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAGGTCTGCTCAGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	114911570	114902594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_141185_47	chr5	-	1314	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	17	2	-14	-2	multi-exon	FALSE	canonical	3	46	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGTCTGCTGTTCTGT	736	False	NA	-2	True	ATTAAA	-21	NA	114952020	114946258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114947393_114951840
Isoform_141186_51	chr5	-	549	2	FSM	ENSMUSG00000072694.9	ENSMUST00000061251.6	579	2	29	1	29	-1	multi-exon	FALSE	canonical	3	102	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTTTTGGCGTCCTTC	779	False	NA	-4	True	NA	NA	NA	114951977	114950854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114951267_114951840
Isoform_141187_64	chr5	-	945	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	1	1	1	-1	multi-exon	FALSE	canonical	3	282	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTTCTTGTGGGTGA	9594	False	NA	1	True	NA	NA	NA	114961528	114959996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114960787_114961373
Isoform_14119_27	chr11	-	613	3	ISM	ENSMUSG00000040904.11	ENSMUST00000176116.8	1688	8	-19	2919	-19	-2875	5prime_fragment	FALSE	canonical	3	75	junction_2	325.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGCTGTCTGTGCTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	70130675	70128950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_70129297_70129763_70129841_70130485
Isoform_141191_9	chr5	-	1514	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	19	-586	-4	586	multi-exon	FALSE	canonical	3	282	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTTTTGGCGTCCTTC	9612	False	NA	1	True	NA	NA	NA	114961510	114959409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114960787_114961373
Isoform_141192_6	chr5	-	1548	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	-18	-583	-18	583	multi-exon	FALSE	canonical	3	282	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCCTGTTTTGGCGTCC	9575	False	NA	-2	True	NA	NA	NA	114961547	114959412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_114960787_114961373
Isoform_141193_5	chr5	-	3005	10	FSM	ENSMUSG00000029556.13	ENSMUST00000031535.12	3191	10	185	1	-38	-1	multi-exon	FALSE	canonical	2	7	junction_9	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGAAGCTTCCTGACTG	NA	False	NA	0	True	AGTAAA	-14	NA	115108941	115087039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
Isoform_141194_59	chr5	-	2774	10	NNC	ENSMUSG00000029556.13	novel	3191	10	NA	NA	-2233	-7	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_9	4.34897462017354	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACGTGGAAGCTTCC	7925	False	NA	-6	True	AGTAAA	-8	NA	115111386	115087045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115111247
Isoform_141195_7	chr5	-	2857	10	NNC	ENSMUSG00000029556.13	novel	3191	10	NA	NA	-2252	57	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_9	4.34897462017354	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGTTTACACATCTTT	7906	False	NA	58	True	NA	NA	NA	115111405	115086981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115111247
Isoform_14120_4	chr11	-	1371	6	ISM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	7749	646	7737	-646	3prime_fragment	FALSE	canonical	3	25	junction_5	2.49799919935936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTCACATGTCACAGG	NA	False	NA	-2	True	NA	NA	NA	70138430	70132928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085
Isoform_141200_2179	chr5	-	1829	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	41	0	5	0	multi-exon	FALSE	canonical	3	425	junction_3	13.7822573362984	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9815	False	NA	-4	True	AATAAA	-18	NA	115257364	115248357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
Isoform_141206_49	chr5	-	1911	9	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	425	junction_3	14.5811307860536	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9815	False	NA	-4	True	AATAAA	-18	NA	115257364	115248357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
Isoform_141209_1066	chr5	-	3599	5	FSM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	48	12	-2	-12	multi-exon	FALSE	canonical	3	283	junction_1	7.58287544405155	1066	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTCTGACTTGCCTC	NA	False	NA	-2	True	AATAAA	-15	NA	115272986	115260620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115263560_115265069_115265243_115265360_115265473_115268525_115268640_115272725
Isoform_14121_17	chr11	-	2377	14	FSM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	-19	643	-19	-643	multi-exon	FALSE	canonical	3	19	junction_6	3.422860840198	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCACATGTCACAGGGTC	7383	False	NA	1	True	NA	NA	NA	70146198	70132925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
Isoform_141221_53	chr5	-	6025	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-72	2	-72	-2	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCGTGTTGAGAGTGAA	4652	False	NA	-5	True	AATAAA	-14	NA	115296310	115281041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
Isoform_141222_1237	chr5	-	5958	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-4	1	-4	-1	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	4720	False	NA	-4	True	AATAAA	-15	NA	115296242	115281040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
Isoform_14123_24	chr11	-	2345	14	FSM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	13	643	1	-643	multi-exon	FALSE	canonical	3	19	junction_6	3.422860840198	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCACATGTCACAGGGTC	7415	False	NA	1	True	NA	NA	NA	70146166	70132925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
Isoform_14124_10	chr11	-	2426	14	FSM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	16	559	4	-559	multi-exon	FALSE	canonical	3	19	junction_6	3.422860840198	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCAGCACCTTTAATCT	7418	False	NA	85	True	NA	NA	NA	70146163	70132841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
Isoform_14125_3	chr11	-	2470	14	FSM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	-53	584	-53	-584	multi-exon	FALSE	canonical	3	19	junction_6	3.422860840198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGTGCACT	7349	False	NA	60	True	NA	NA	NA	70146232	70132866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
Isoform_141250_41	chr5	-	813	3	ISM	ENSMUSG00000029544.17	ENSMUST00000112109.8	1071	7	8103	-25	7940	0	3prime_fragment	FALSE	canonical	3	234	junction_2	2	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	2388	False	NA	-1	True	AATAAA	-20	NA	115311378	115306747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_115307208_115310817_115310966_115311173
Isoform_141256_47	chr5	-	1262	7	FSM	ENSMUSG00000029544.17	ENSMUST00000031519.14	1370	7	108	0	-79	0	multi-exon	FALSE	canonical	3	35	junction_6	80.5826008239716	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	9973	False	NA	-1	True	AATAAA	-20	NA	115324259	115306747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115324070
Isoform_141257_3	chr5	-	1325	7	FSM	ENSMUSG00000029544.17	ENSMUST00000031519.14	1370	7	44	1	44	-1	multi-exon	FALSE	canonical	3	35	junction_6	80.5826008239716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGGTGGTCCTTGCTT	9951	False	NA	-2	True	AATAAA	-19	NA	115324323	115306748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115324070
Isoform_141258_4	chr5	-	1275	7	NNC	ENSMUSG00000029544.17	novel	1370	7	NA	NA	-677	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	88.7926736216952	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGAGGGTGGTCCTTGCT	8086	False	NA	-3	True	AATAAA	-18	NA	115333117	115306749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115332913
Isoform_14126_4	chr11	-	1954	8	FSM	ENSMUSG00000000320.11	ENSMUST00000108574.3	2314	8	-30	390	-18	-390	multi-exon	FALSE	canonical	3	24	junction_3	2.55550625999976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTGAAAAACCCTGATGA	7384	False	NA	NA	False	AATAAA	-20	NA	70146197	70140178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
Isoform_141260_28	chr5	-	1615	6	FSM	ENSMUSG00000029544.17	ENSMUST00000112113.8	1621	6	5	1	5	-1	multi-exon	FALSE	canonical	3	43	junction_5	70.6693710174358	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGGTGGTCCTTGCTT	8768	False	NA	-2	True	AATAAA	-19	NA	115332435	115306748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115331712
Isoform_141263_20	chr5	-	1082	6	NNC	ENSMUSG00000029544.17	novel	1621	6	NA	NA	-2675	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	79.358931444419	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGGTGGTCCTTGCTT	7481	False	NA	-2	True	AATAAA	-19	NA	115327042	115306748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115326852
Isoform_141266_335	chr5	-	3099	17	FSM	ENSMUSG00000041740.17	ENSMUST00000040555.15	3106	17	1	6	1	-1	multi-exon	FALSE	canonical	3	224	junction_1	338.888480689076	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGCCGCCTTCCCGAC	NA	False	NA	-26	True	AATAAA	-14	NA	115410950	115379834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
Isoform_14127_6	chr11	-	1473	8	FSM	ENSMUSG00000000320.11	ENSMUST00000108574.3	2314	8	3	838	3	-838	multi-exon	FALSE	canonical	3	24	junction_3	2.55550625999976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGAGCTGAGTCCTTTA	7417	False	NA	NA	False	NA	NA	NA	70146164	70140626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
Isoform_141290_43	chr5	-	3161	18	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	504.425707233134	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410950	115379828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115397552_115397606_115398177_115398375_115410315
Isoform_141294_2719	chr5	-	3102	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112096.9	3112	17	4	6	1	-1	multi-exon	FALSE	canonical	3	1263	junction_14	135.987361545108	2719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGCCGCCTTCCCGAC	NA	False	NA	-26	True	AATAAA	-14	NA	115410950	115379834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
Isoform_141305_196	chr5	-	3110	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112097.8	3476	17	7	359	1	-1	multi-exon	FALSE	canonical	3	78	junction_9	376.541410197803	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410950	115379829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
Isoform_141312_45	chr5	-	834	2	FSM	ENSMUSG00000009013.6	ENSMUST00000112090.2	729	2	-22	-83	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115436893_115438571
Isoform_141316_2772	chr5	-	653	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	65	1312	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115436893_115438571_115438710_115438890
Isoform_141318_88	chr5	-	686	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	32	1312	32	0	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115439026	115436480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115436893_115438571_115438710_115438890
Isoform_141321_34	chr5	-	699	3	NNC	ENSMUSG00000009013.6	novel	2030	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	367	junction_2	1708.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTCTGCTAGTTTGTT	NA	False	NA	-3	True	AATAAA	-14	NA	115438993	115436482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_115436893_115438571_115438710_115438842
Isoform_141323_50	chr5	-	1779	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	18	0	18	0	multi-exon	FALSE	canonical	3	122	junction_1	3.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGCTGATTTTTTAC	9727	False	NA	-1	True	NA	NA	NA	115479219	115471297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115472654_115473525_115473630_115478900
Isoform_141327_5	chr5	-	2203	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	18	-424	18	424	multi-exon	FALSE	canonical	3	122	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCTAAGACTCTAATCAA	9727	False	NA	NA	False	AAGAAA	-11	NA	115479219	115470873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115472654_115473525_115473630_115478900
Isoform_141328_3	chr5	-	5302	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	-19	-3486	-19	3486	multi-exon	FALSE	canonical	3	122	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAGCATATTCTCTAAA	9690	False	NA	NA	False	AATAAA	-18	NA	115479256	115467811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115472654_115473525_115473630_115478900
Isoform_141330_4	chr5	-	5262	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	18	-3483	18	3483	multi-exon	FALSE	canonical	3	122	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGCAAGCATATTCTCT	9727	False	NA	NA	False	AATAAA	-15	NA	115479219	115467814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115472654_115473525_115473630_115478900
Isoform_141335_4104	chr5	-	534	3	FSM	ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	25	12	25	3	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	4104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCGTGAGCTGGACG	4879	False	NA	-38	True	AATAAA	-14	NA	115487015	115483712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115483986_115486623_115486767_115486897
Isoform_141338_38	chr5	-	1428	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	363	3	4	0	multi-exon	FALSE	canonical	3	34	junction_3	4.96865172858795	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAATGTGTGGACTGTG	9383	False	NA	NA	False	AATAAA	-16	NA	115622421	115616071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622390
Isoform_141339_3	chr5	-	1465	5	NNC	ENSMUSG00000029524.17	novel	1794	5	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.2002747232013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGCATAACAAATGTGT	9385	False	NA	NA	False	AATAAA	-8	NA	115622419	115616079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_115616468_115617660_115617872_115618242_115618585_115620682_115621178_115622390
Isoform_141341_13	chr5	-	1890	3	FSM	ENSMUSG00000041609.17	ENSMUST00000118576.8	1874	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	4	junction_2	14.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTGCCTCAGTTCCT	NA	False	NA	-3	True	AATAAA	-14	NA	115791061	115786235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115787629_115789877_115789999_115790685
Isoform_141342_3	chr5	-	1594	3	FSM	ENSMUSG00000041609.17	ENSMUST00000121746.8	1568	3	-22	-4	-17	-1	multi-exon	FALSE	canonical	0	0	junction_2	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGCCTCAGTTCCTG	NA	False	NA	-2	True	AATAAA	-15	NA	115791062	115786234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115787629_115789877_115789999_115790983
Isoform_141343_20	chr5	-	3824	10	NIC	ENSMUSG00000041609.17	novel	3026	9	NA	NA	-654	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	7.26907877057606	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGCCTCAGTTCCTGG	NA	False	NA	-1	True	AATAAA	-16	NA	115870334	115786233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_115787629_115789877_115789999_115793959_115794091_115799433_115799578_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180
Isoform_141345_9	chr5	-	3913	9	FSM	ENSMUSG00000041609.17	ENSMUST00000055408.13	3026	9	-889	2	-889	0	multi-exon	FALSE	canonical	3	12	junction_3	5.84032319311183	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTGCCTCAGTTCCT	NA	False	NA	-3	True	AATAAA	-14	NA	115870569	115786235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115787629_115789877_115789999_115793959_115794091_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180
Isoform_141346_19	chr5	-	3684	9	FSM	ENSMUSG00000041609.17	ENSMUST00000055408.13	3026	9	-659	1	-659	-1	multi-exon	FALSE	canonical	3	12	junction_3	5.84032319311183	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGCCTCAGTTCCTG	NA	False	NA	-2	True	AATAAA	-15	NA	115870339	115786234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115787629_115789877_115789999_115793959_115794091_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180
Isoform_141348_9	chr5	-	1980	3	NNC	ENSMUSG00000041609.17	novel	1874	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	16	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTCAGTTCCTGGGT	NA	False	NA	1	True	AATAAA	-18	NA	115791045	115786231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_115787629_115789877_115789999_115790583
Isoform_141353_88	chr5	-	2064	7	FSM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	9	16	-2	-12	multi-exon	FALSE	canonical	3	213	junction_6	10.0788557551606	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACTGGAGTAACTTT	NA	False	NA	-16	True	AATAAA	-9	NA	116162512	116151660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149
Isoform_141354_421	chr5	-	1956	8	FSM	ENSMUSG00000029513.15	ENSMUST00000111999.8	2026	8	58	12	1	-12	multi-exon	FALSE	canonical	3	151	junction_7	27.0313499024932	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACTGGAGTAACTTT	NA	False	NA	-16	True	AATAAA	-9	NA	116162509	116151660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
Isoform_141356_10	chr5	-	1979	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	-168	5	-168	-5	multi-exon	FALSE	canonical	3	315	junction_2	24.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTTGTGCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	116561091	116546554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_116547550_116553465_116553530_116560171
Isoform_141357_546	chr5	-	1812	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	0	4	0	-4	multi-exon	FALSE	canonical	3	315	junction_2	24.5	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTTGTGCTTCATTTA	NA	False	NA	-4	True	AATAAA	-16	NA	116560923	116546553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_116547550_116553465_116553530_116560171
Isoform_141358_79	chr5	-	1939	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	-126	3	-126	-3	multi-exon	FALSE	canonical	3	315	junction_2	24.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGCTTCATTTAG	NA	False	NA	-3	True	AATAAA	-17	NA	116561049	116546552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_116547550_116553465_116553530_116560171
Isoform_141364_11	chr5	-	1208	2	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	5511	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGCTTCATTTAG	NA	False	NA	-3	True	AATAAA	-17	NA	116548440	116546552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_116547550_116548229
Isoform_141365_38	chr5	-	2314	13	FSM	ENSMUSG00000066900.12	ENSMUST00000166397.3	1694	13	136	-756	21	-1	multi-exon	FALSE	canonical	3	113	junction_1	144.428375174533	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCACGTGGTCTGTTT	NA	False	NA	-5	True	GATAAA	-17	NA	117254042	117229745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_141367_76	chr5	-	1523	13	FSM	ENSMUSG00000066900.12	ENSMUST00000166397.3	1694	13	171	0	56	0	multi-exon	FALSE	canonical	3	113	junction_1	144.428375174533	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254007	117230501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_141369_62	chr5	-	1558	13	FSM	ENSMUSG00000066900.12	ENSMUST00000166397.3	1694	13	136	0	21	0	multi-exon	FALSE	canonical	3	113	junction_1	144.428375174533	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254042	117230501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_141374_298	chr5	-	2403	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	21	1	21	-1	multi-exon	FALSE	canonical	3	565	junction_3	37.0610396664344	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCACGTGGTCTGTTT	NA	False	NA	-5	True	GATAAA	-17	NA	117254042	117229745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_141375_337	chr5	-	2375	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	49	1	49	-1	multi-exon	FALSE	canonical	3	565	junction_3	37.0610396664344	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCACGTGGTCTGTTT	NA	False	NA	-5	True	GATAAA	-17	NA	117254014	117229745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_141378_37	chr5	-	2562	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	-134	-3	-19	3	multi-exon	FALSE	canonical	3	565	junction_3	37.0610396664344	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGGTCTGTTTCTTC	NA	False	NA	-1	True	GATAAA	-21	NA	117254197	117229741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_141385_19	chr5	-	1842	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	-174	757	-59	0	multi-exon	FALSE	canonical	3	565	junction_3	37.0610396664344	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254237	117230501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_141391_19	chr5	-	3504	10	NIC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	595	junction_3	32.8039443578375	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCACGTGGTCTGTTTCT	NA	False	NA	-3	True	GATAAA	-19	NA	117254063	117229743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_141392_25	chr5	-	2684	10	NIC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	62	0	intron_retention	FALSE	canonical	3	595	junction_3	32.8039443578375	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254001	117230501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_141399_4609	chr5	-	1202	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	39	-1	-3	1	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	4609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCGGGTATTTCCTTC	NA	False	NA	-16	True	AATAAA	-16	NA	117425651	117420717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
Isoform_141400_311	chr5	-	1232	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	9	-1	9	1	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCGGGTATTTCCTTC	NA	False	NA	-16	True	AATAAA	-16	NA	117425681	117420717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
Isoform_141416_2668	chr5	-	1725	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	25	1046	0	468	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	2668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527087	117517213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
Isoform_141417_181	chr5	-	2445	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	527.296206373797	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGAGGCGTCTT	NA	False	NA	NA	False	AATATA	-17	NA	117527087	117516468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_117516722_117516746_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
Isoform_141422_74	chr5	-	1770	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	-12	1038	-12	476	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTGTCTACCTGCAT	NA	False	NA	-12	True	AATAAA	-24	NA	117527124	117517205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
Isoform_141446_962	chr5	-	3321	11	FSM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	29	1650	-9	-1650	multi-exon	FALSE	canonical	3	339	junction_8	26.290682760248	962	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGTGTGTGCTGCTCCT	NA	False	NA	-31	True	ATTAAA	-14	NA	118293500	118204679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
Isoform_141454_17	chr5	-	4315	11	FSM	ENSMUSG00000032850.17	ENSMUST00000121369.8	4431	11	117	-1	-5	1	multi-exon	FALSE	canonical	3	9	junction_8	4.80520551069359	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTATCTGTGAGTCACT	NA	False	NA	NA	False	AATAAA	-18	NA	118383064	118328805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370466_118370568_118372205_118372283_118375191_118375662_118380522_118380582_118380914_118381097_118383036
Isoform_141456_3	chr5	-	2169	4	ISM	ENSMUSG00000032850.17	ENSMUST00000121369.8	4431	11	98	44974	-24	1211	5prime_fragment	FALSE	canonical	3	9	junction_1	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGACCATCTTTTGT	NA	False	NA	NA	False	AAAAAG	-9	NA	118383083	118373780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_118375662_118380522_118380582_118380914_118381097_118383036
Isoform_141457_3	chr5	-	1200	8	ISM	ENSMUSG00000029596.14	ENSMUST00000031594.13	1476	9	5500	3	50	-3	3prime_fragment	FALSE	canonical	1	1	junction_2	1.82946406783796	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGTGTGGCTCCCTGGG	7203	False	NA	NA	False	AATAAA	-12	NA	120605375	120596269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_120596617_120597509_120597635_120597820_120598049_120598671_120598761_120600041_120600182_120600910_120600951_120601096_120601291_120605338
Isoform_141463_763	chr5	-	2219	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	24	1965	0	0	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGGCCTTGAGTCTT	NA	False	NA	-5	True	NA	NA	NA	120641666	120623311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
Isoform_141464_197	chr5	-	2715	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	16	1477	3	488	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCCTCTGGTTATTGTA	NA	False	NA	-4	True	NA	NA	NA	120641674	120622823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
Isoform_141465_122	chr5	-	3569	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	24	615	0	-615	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAAAGTGCACATTATA	NA	False	NA	-4	True	NA	NA	NA	120641666	120621961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
Isoform_141476_12	chr5	-	4631	29	NNC	ENSMUSG00000032741.10	novel	4712	28	NA	NA	-30	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.27545835385914	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCGGCTGCAGCCTTTGA	9214	False	NA	-3	True	AATAAA	-18	NA	120726707	120672221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_120672415_120672460_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
Isoform_141477_18	chr5	-	2784	28	FSM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	31	1897	-30	-1897	multi-exon	FALSE	canonical	2	12	junction_13	5.06365515872966	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTATGGGAACCATGTGTG	9214	False	NA	NA	False	NA	NA	NA	120726707	120674114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
Isoform_141478_7	chr5	-	2692	2	FSM	ENSMUSG00000032741.10	ENSMUST00000202072.2	2622	2	-69	-1	10	1	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9193	False	NA	NA	False	NA	NA	NA	120726728	120720962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_120723494_120726567
Isoform_141479_3	chr5	-	1099	4	NIC	ENSMUSG00000029600.11	novel	712	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	29.8923996285938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCAGTCCTGATACT	6335	False	NA	-4	True	NA	NA	NA	120750634	120740169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_120740583_120742274_120742313_120749442_120749795_120750338
Isoform_141480_11	chr5	-	849	3	NNC	ENSMUSG00000029600.11	novel	712	3	NA	NA	-1233	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCAGTCCTGATACTC	9611	False	NA	-3	True	NA	NA	NA	120745015	120740168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_120740583_120742274_120742313_120744618
Isoform_141481_3	chr5	-	2638	3	ISM	ENSMUSG00000029600.11	ENSMUST00000177800.8	1668	4	-775	4	-775	-4	intron_retention	FALSE	canonical	2	10	junction_2	35	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGGTAGTGTGTTACT	5540	False	NA	NA	False	ATTAAA	-16	NA	120751429	120747126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_120748028_120749442_120749795_120750044
Isoform_141482_22	chr5	-	2440	4	FSM	ENSMUSG00000029600.11	ENSMUST00000177800.8	1668	4	-775	3	-775	-3	multi-exon	FALSE	canonical	2	9	junction_3	33.2365260920372	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGTAGTGTGTTACTT	5540	False	NA	NA	False	ATTAAA	-17	NA	120751429	120747125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_120748028_120749442_120749795_120750044_120750140_120750338
Isoform_141484_45	chr5	-	2343	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	-775	5	-775	-5	multi-exon	FALSE	canonical	3	77	junction_2	1.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCGGTAGTGTGTTAC	5540	False	NA	NA	False	ATTAAA	-15	NA	120751429	120747127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_120748028_120749442_120749795_120750338
Isoform_141485_98	chr5	-	1549	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	21	3	2	-3	multi-exon	FALSE	canonical	3	77	junction_2	1.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGTAGTGTGTTACTT	6336	False	NA	NA	False	ATTAAA	-17	NA	120750633	120747125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_120748028_120749442_120749795_120750338
Isoform_14149_1743	chr11	-	3434	17	FSM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	1	0	1	0	multi-exon	FALSE	canonical	3	551	junction_9	48.6591701917532	1743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	False	NA	-27	True	AATAAA	-13	NA	70300853	70283708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
Isoform_141491_6	chr5	-	1919	6	NIC	ENSMUSG00000029603.16	novel	2961	8	NA	NA	-543	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	37.5179956820724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120821523	120818267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820632_120820804_120821125_120821188_120821359
Isoform_141495_70	chr5	-	1896	6	ISM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	11956	0	-532	0	3prime_fragment	FALSE	canonical	3	95	junction_3	14.7051011557214	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120821512	120818267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359
Isoform_141511_18	chr5	-	3775	10	FSM	ENSMUSG00000029603.16	ENSMUST00000031607.7	4035	10	258	2	258	-1	multi-exon	FALSE	canonical	1	2	junction_8	46.8325095485741	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGCCTTTTTCTGCCA	NA	False	NA	-20	True	AATAAA	-14	NA	120849734	120818268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120848119_120849041_120849549
Isoform_141514_38	chr5	-	2736	9	NNC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	-1049	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	41.4123698307643	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCTTTTTCTGCCAAG	NA	False	NA	-18	True	AATAAA	-16	NA	120834517	120818266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120834452
Isoform_141517_6	chr5	-	3418	9	ISM	ENSMUSG00000032690.17	ENSMUST00000053909.13	3869	11	3807	0	3807	0	3prime_fragment	FALSE	canonical	0	0	junction_2	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGACTGTCCTGGAACT	9048	False	NA	NA	False	NA	NA	NA	120884111	120868397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_120870024_120871478_120871633_120873044_120873284_120874061_120874250_120876359_120876643_120876734_120876909_120879213_120879359_120881109_120881349_120883741
Isoform_141518_23	chr5	-	2630	8	ISM	ENSMUSG00000032661.10	ENSMUST00000044833.9	4720	16	15896	1	-4110	-1	3prime_fragment	FALSE	canonical	1	3	junction_5	2.43276948084663	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTCTTGGTTGTGAT	7691	False	NA	NA	False	NA	NA	NA	120899830	120891163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_120892441_120892620_120892769_120894091_120894331_120894969_120895146_120896777_120897064_120897985_120898160_120899189_120899335_120899645
Isoform_141520_5	chr5	-	1475	7	FSM	ENSMUSG00000066861.15	ENSMUST00000162096.8	1489	7	14	0	14	0	multi-exon	FALSE	canonical	3	16	junction_4	130.842674825745	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025662	121014784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019886_121020133_121023835_121024125_121025442
Isoform_141522_79	chr5	-	1403	7	FSM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	-6	580	-6	0	multi-exon	FALSE	canonical	3	61	junction_5	116.597241248096	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025651	121014784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835_121024125_121025442
Isoform_141523_18	chr5	-	1426	7	FSM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	-29	580	2	0	multi-exon	FALSE	canonical	3	61	junction_5	116.597241248096	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025674	121014784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835_121024125_121025442
Isoform_141532_63	chr5	-	1426	7	FSM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	-4	463	-4	-463	multi-exon	FALSE	canonical	3	208	junction_1	161.447015732372	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045588	121034781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
Isoform_141533_581	chr5	-	1403	7	FSM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	19	463	19	-463	multi-exon	FALSE	canonical	3	208	junction_1	161.447015732372	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045565	121034781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
Isoform_141536_11	chr5	-	3967	6	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	18	-464	intron_retention	FALSE	canonical	3	208	junction_1	174.069641235915	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045566	121034782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121040118_121043658_121043948_121045356
Isoform_141539_13	chr5	-	1445	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	19	-463	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	226.213026444839	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045565	121034781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121035088_121035242_121035312_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
Isoform_141545_119	chr5	-	5612	16	FSM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	-18	5	-18	3	multi-exon	FALSE	canonical	3	69	junction_6	9.90263713473448	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATTTGTCATTTGGTCT	834	False	NA	-5	True	AATAAA	-18	NA	121329478	121268600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
Isoform_141549_50	chr5	-	5628	16	FSM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	-85	-8	-17	0	multi-exon	TRUE	non_canonical	0	0	junction_6	23.8687149959011	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCATTTGGTCTGTTGT	835	False	NA	0	True	AATAAA	-23	NA	121329477	121268595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282760_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
Isoform_141554_18	chr5	-	2483	12	FSM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	20	0	17	0	multi-exon	FALSE	canonical	3	16	junction_2	8.79894809640935	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATTCTTTCTATAG	3589	False	NA	1	True	AATAAA	-19	NA	121523675	121509787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
Isoform_141556_21	chr5	-	2437	12	FSM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	-8	-4	-2	-1	multi-exon	FALSE	canonical	3	6	junction_2	10.9499235817553	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGATTCTTTCTATA	3622	False	NA	0	True	AATAAA	-18	NA	121523642	121509788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121510476_121510665_121510739_121511212_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
Isoform_141557_11	chr5	-	2282	12	NIC	ENSMUSG00000042726.15	novel	2503	12	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	10.4920276700026	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATTCTTTCTATAG	3589	False	NA	1	True	AATAAA	-19	NA	121523675	121509787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121510476_121510665_121510739_121511401_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
Isoform_141558_973	chr5	-	1241	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	34	3929	15	3	multi-exon	FALSE	canonical	3	820	junction_1	20.5	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTTTTTAGATA	3246	False	NA	-38	True	AATAAA	-17	NA	121590535	121582815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121583636_121585203_121585343_121590253
Isoform_141561_13	chr5	-	1128	2	FSM	ENSMUSG00000029616.10	ENSMUST00000052590.8	1123	2	-3	-2	-3	2	multi-exon	FALSE	canonical	3	31	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTTCTTTTTAGAT	3219	False	NA	-39	True	AATAAA	-16	NA	121590562	121582816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121583636_121590253
Isoform_141562_113	chr5	-	1990	15	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	204	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	58.6505128115793	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTGCTTAAAGTTGC	NA	False	NA	-12	True	AATAAA	-14	NA	121683764	121663116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683715_121683738
Isoform_141563_9	chr5	-	2251	15	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	58.6505128115793	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTTAAAGTTGCTATA	NA	False	NA	-8	True	AATAAA	-18	NA	121684021	121663112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683715_121683738
Isoform_141564_69	chr5	-	1988	14	FSM	ENSMUSG00000029454.16	ENSMUST00000031410.14	2234	14	232	14	232	0	multi-exon	FALSE	canonical	0	0	junction_9	50.8494703910793	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121683736	121663114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
Isoform_141569_4	chr5	-	1105	9	NNC	ENSMUSG00000029454.16	novel	975	9	NA	NA	1228	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	60.8788499809252	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	1302	False	NA	-10	True	AATAAA	-16	NA	121672686	121663114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121672613
Isoform_141570_31	chr5	-	2008	15	NNC	ENSMUSG00000029454.16	novel	1513	14	NA	NA	188	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	64.1970817570585	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAAGTTGCTATATAGA	NA	False	NA	-4	True	AATAAA	-22	NA	121683780	121663108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683715_121683738
Isoform_141573_6	chr5	-	2233	15	NNC	ENSMUSG00000029454.16	novel	1513	14	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	64.1970817570585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121684011	121663114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683715_121683738
Isoform_141587_2342	chr5	-	1952	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	234	1681	-8	170	multi-exon	TRUE	canonical	3	476	junction_10	93.9036148872283	2342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACGGGGTCAGTTCTC	NA	False	NA	-28	True	AATAAA	-14	NA	121731653	121705770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
Isoform_141599_7	chr5	-	2325	11	FSM	ENSMUSG00000042647.14	ENSMUST00000041252.13	3881	11	52	1504	-23	-1374	multi-exon	FALSE	canonical	3	24	junction_8	9.91413132856328	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGGCATCTATGGCTT	NA	False	NA	NA	False	GATAAA	-18	NA	121756949	121736341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
Isoform_141600_4	chr5	-	2384	11	FSM	ENSMUSG00000042647.14	ENSMUST00000041252.13	3881	11	-5	1502	-5	-1372	multi-exon	FALSE	canonical	3	24	junction_8	9.91413132856328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGCATCTATGGCTTTC	NA	False	NA	NA	False	GATAAA	-20	NA	121757006	121736339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
Isoform_141602_102	chr5	-	3623	21	FSM	ENSMUSG00000029456.13	ENSMUST00000111770.2	3626	21	5	-2	5	0	multi-exon	FALSE	canonical	3	24	junction_2	12.9348366823861	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTGAGCTAGATTT	NA	False	NA	-5	True	NA	NA	NA	121798572	121759088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
Isoform_141604_5	chr5	-	3662	21	NIC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	15.036954478883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798572	121759090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794318_121798355
Isoform_141605_3	chr5	-	3457	20	NIC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	15.3653565798352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798567	121759090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121787416_121787612_121790018_121790168_121794076_121794277_121798355
Isoform_141606_3	chr5	-	3532	20	NIC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	15.372746327182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798552	121759090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
Isoform_141608_5	chr5	-	2601	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	32	1562	-2	6	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTAGGACCCCCCTGTCA	NA	False	NA	66	True	ATTAAA	-20	NA	121974890	121955272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
Isoform_141609_6	chr5	-	2551	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	0	1644	0	-2	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTCAGAGTACTTTTT	NA	False	NA	-16	True	TTTAAA	-4	NA	121974922	121955354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
Isoform_141610_4	chr5	-	4407	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	-45	-167	-45	7	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGATCTCTGCATCCACA	NA	False	NA	-13	True	ATTAAA	-20	NA	121974967	121953543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
Isoform_141612_4	chr5	-	4333	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	32	-170	-2	10	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCTGCATCCACACAC	NA	False	NA	-10	True	ATTAAA	-23	NA	121974890	121953540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
Isoform_141613_3	chr5	-	4132	9	NIC	ENSMUSG00000042594.17	novel	4195	9	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	1	junction_8	20.6877832306896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTACAACCATGATCTCT	NA	False	NA	-22	True	ATTAAA	-11	NA	121975725	121953552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121975636
Isoform_141614_3	chr5	-	2399	9	NIC	ENSMUSG00000042594.17	novel	4195	9	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	20.6877832306896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTACTAGGACCCCC	NA	False	NA	60	True	ATTAAA	-14	NA	121975718	121955278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121975636
Isoform_141615_24	chr5	-	4284	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	-22	-1732	-13	4	multi-exon	FALSE	canonical	3	25	junction_7	11.8252583351856	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCATGATCTCTGCATCC	NA	False	NA	-16	True	ATTAAA	-17	NA	121974935	121953546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
Isoform_141618_24	chr5	-	2464	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	-9	75	0	-1	multi-exon	FALSE	canonical	3	25	junction_7	11.8252583351856	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTCAGAGTACTTTTTT	NA	False	NA	-15	True	TTTAAA	-5	NA	121974922	121955353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
Isoform_141619_31	chr5	-	4236	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	29	-1735	-4	7	multi-exon	FALSE	canonical	3	25	junction_7	11.8252583351856	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGATCTCTGCATCCACA	NA	False	NA	-13	True	ATTAAA	-20	NA	121974884	121953543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
Isoform_141622_14	chr5	-	2253	8	NIC	ENSMUSG00000042594.17	novel	2530	8	NA	NA	-18	7	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	16.67088382021	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTACTTTTTTTTGTTTTG	NA	False	NA	-7	True	TTTAAA	-13	NA	121975727	121955345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
Isoform_141623_10	chr5	-	4046	8	NIC	ENSMUSG00000042594.17	novel	2530	8	NA	NA	-9	7	intron_retention	FALSE	canonical	3	8	junction_7	16.67088382021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGATCTCTGCATCCACA	NA	False	NA	-13	True	ATTAAA	-20	NA	121975718	121953543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
Isoform_141624_5	chr5	-	4319	7	FSM	ENSMUSG00000042594.17	ENSMUST00000136960.8	4313	7	4	-10	-4	10	multi-exon	FALSE	canonical	3	25	junction_6	11.6535640709422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCTGCATCCACACAC	NA	False	NA	-10	True	ATTAAA	-23	NA	121974884	121953540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
Isoform_141625_4	chr5	-	2561	7	FSM	ENSMUSG00000042594.17	ENSMUST00000136960.8	4313	7	-48	1800	-14	2	multi-exon	FALSE	canonical	3	25	junction_6	11.6535640709422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGAGTACTTTTTTTTG	NA	False	NA	-12	True	TTTAAA	-8	NA	121974936	121955350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
Isoform_141626_3	chr5	-	2315	7	NIC	ENSMUSG00000042594.17	novel	4313	7	NA	NA	-18	-11	intron_retention	FALSE	canonical	3	8	junction_6	16.86877457184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACATTTTACCTCAGA	NA	False	NA	-25	True	NA	NA	NA	121975727	121955363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
Isoform_141627_3	chr5	-	4132	7	NIC	ENSMUSG00000042594.17	novel	4313	7	NA	NA	-16	6	intron_retention	FALSE	canonical	3	8	junction_6	16.86877457184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGATCTCTGCATCCAC	NA	False	NA	-14	True	ATTAAA	-19	NA	121975725	121953544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
Isoform_141628_22	chr5	-	2011	14	FSM	ENSMUSG00000038593.19	ENSMUST00000111738.8	5717	14	33	3673	-12	-234	multi-exon	FALSE	non_canonical	0	0	junction_4	9.03379584978658	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGGGCTGTGGTGTT	NA	False	NA	0	True	TTTAAA	-17	NA	122402490	122379583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122388509_122388531_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
Isoform_141629_5	chr5	-	4037	14	FSM	ENSMUSG00000038593.19	ENSMUST00000111738.8	5717	14	33	1647	-12	-1647	multi-exon	FALSE	non_canonical	0	0	junction_4	9.03379584978658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTAAGTTCATTTGA	NA	False	NA	-1	True	AATAAA	-16	NA	122402490	122377557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122388509_122388531_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
Isoform_14163_9	chr11	-	1472	5	FSM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	19	1208	19	-1	multi-exon	FALSE	canonical	2	5	junction_4	7.17635004720366	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGCCCCCATTGACA	7619	False	NA	NA	False	NA	NA	NA	70350791	70346016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70346271_70346480_70346889_70349570_70349654_70349854_70349994_70350203
Isoform_141631_9	chr5	-	2060	14	FSM	ENSMUSG00000038593.19	ENSMUST00000111738.8	5717	14	-16	3673	-16	-234	multi-exon	FALSE	non_canonical	0	0	junction_4	9.03379584978658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGGGCTGTGGTGTT	NA	False	NA	0	True	TTTAAA	-17	NA	122402539	122379583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122388509_122388531_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
Isoform_141632_9	chr5	-	2295	14	FSM	ENSMUSG00000038593.19	ENSMUST00000111738.8	5717	14	33	3389	-12	50	multi-exon	FALSE	non_canonical	0	0	junction_4	9.03379584978658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCATGTGCTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	122402490	122379299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122388509_122388531_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
Isoform_141633_3	chr5	-	2364	13	NIC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	5.40768486096921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGAGTGCTTACATTG	9999	False	NA	NA	False	ATTAAA	-44	NA	122492289	122461288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_122462288_122463413_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
Isoform_141635_6	chr5	-	1602	11	FSM	ENSMUSG00000038569.14	ENSMUST00000049009.7	1631	11	29	0	16	0	multi-exon	FALSE	canonical	3	7	junction_9	5.37494186015067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGGTCATTTTATA	9951	False	NA	NA	False	AATAAA	-17	NA	122492267	122463570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
Isoform_141636_281	chr5	-	1359	7	FSM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	26	3	26	-3	multi-exon	FALSE	canonical	3	223	junction_4	23.7235232534199	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAATTTTAAATTATC	NA	False	NA	-23	True	ATTAAA	-18	NA	122510401	122502645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945
Isoform_14164_17	chr11	-	1791	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	80	-160	0	160	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70537804	70534861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
Isoform_14165_634	chr11	-	1632	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	76	3	-4	-3	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTGTGTAAAGTCGTA	NA	False	NA	-3	True	ATTAAA	-25	NA	70537808	70535024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
Isoform_141679_1470	chr5	-	4541	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-48	-7	-48	7	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAACTGTCTTGTTCT	7229	False	NA	-21	True	AATAAA	-20	NA	122640336	122594395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
Isoform_14169_79	chr11	-	1675	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	33	3	33	-3	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTGTGTAAAGTCGTA	NA	False	NA	-3	True	ATTAAA	-25	NA	70537851	70535024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
Isoform_141694_39	chr5	-	7360	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-48	-2826	-48	0	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGCTGTGGCTGATTT	7229	False	NA	NA	False	AATAAA	-22	NA	122640336	122591576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
Isoform_141701_22	chr5	-	2951	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	-3	2	-3	-2	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCTCTTTTTACTTCA	1240	False	NA	NA	False	ATTAAA	-18	NA	122752584	122688268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
Isoform_141702_64	chr5	-	2656	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	-3	297	-3	-293	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATAGTTGTGTCAAG	1240	False	NA	-6	True	AATAAA	-34	NA	122752584	122688563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
Isoform_141703_8	chr5	-	2832	18	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	14.5402436403627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCTCTTTTTACTTCA	1255	False	NA	NA	False	ATTAAA	-18	NA	122752569	122688268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122749005_122749171_122752500
Isoform_141706_3	chr5	-	902	7	FSM	ENSMUSG00000029469.15	ENSMUST00000144065.6	872	7	-22	-8	-10	8	multi-exon	FALSE	canonical	3	48	junction_5	10.4682058316281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTCCTATTGATGGA	1233	False	NA	NA	False	NA	NA	NA	122752591	122740236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
Isoform_141707_4	chr5	-	2510	17	NIC	ENSMUSG00000029471.14	novel	4861	17	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_15	27.0525385823586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	4616	False	NA	NA	False	NA	NA	NA	122917479	122871268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902017_122902322_122902366_122917314
Isoform_141709_30	chr5	-	2791	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-55	15	-6	1	multi-exon	TRUE	canonical	3	10	junction_2	25.1434992702996	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	4644	False	NA	NA	False	NA	NA	NA	122917451	122871265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_141710_3	chr5	-	2855	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-119	15	-43	1	multi-exon	FALSE	canonical	3	10	junction_2	25.1434992702996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	4580	False	NA	NA	False	NA	NA	NA	122917515	122871265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_141714_15	chr5	-	2667	15	NIC	ENSMUSG00000029471.14	novel	2751	16	NA	NA	6	1	intron_retention	FALSE	canonical	3	5	junction_2	23.9604265574786	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	4639	False	NA	NA	False	NA	NA	NA	122917456	122871265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_122872309_122875495_122875597_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_141719_132	chr5	-	2037	13	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	11	2732	-6	-2732	5prime_fragment	FALSE	canonical	3	28	junction_4	15.8190725251374	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGGAATGTCACTCAGT	4644	False	NA	-22	True	AATAAA	-16	NA	122917451	122881413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_141720_7	chr5	-	2104	13	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	-56	2732	-46	-2732	5prime_fragment	FALSE	canonical	3	28	junction_4	15.8190725251374	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGGAATGTCACTCAGT	4577	False	NA	-22	True	AATAAA	-16	NA	122917518	122881413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_141721_3	chr5	-	1524	12	NIC	ENSMUSG00000029471.14	novel	3139	14	NA	NA	0	-2737	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	22.6518749338003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGGCTTGGAATGTCAC	4623	False	NA	-27	True	AATAAA	-11	NA	122917472	122881418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122917314
Isoform_141723_15	chr5	-	1143	5	FSM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	-63	4	-6	-4	multi-exon	FALSE	canonical	3	71	junction_1	7.3824115301167	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGGAGTTAGCAGTG	4644	False	NA	-4	True	AATAAA	-17	NA	122917451	122894342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_141726_36	chr5	-	2415	17	FSM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	2	-4	1	0	multi-exon	FALSE	canonical	3	167	junction_3	528.705609099951	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	-19	True	AATAAA	-20	NA	122959341	122925785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122926082_122926364_122926528_122929670_122929799_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_141737_982	chr5	-	2399	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	16	-11	1	1	multi-exon	FALSE	canonical	3	855	junction_8	345.39967790952	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGTTTTTTTTTATTTT	NA	False	NA	-16	True	AATAAA	-23	NA	122959341	122925782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_141738_275	chr5	-	2428	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	-13	-11	-13	1	multi-exon	FALSE	canonical	3	855	junction_8	345.39967790952	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGTTTTTTTTTATTTT	NA	False	NA	-16	True	AATAAA	-23	NA	122959370	122925782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_141744_58	chr5	-	2413	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	2	-2	1	0	multi-exon	FALSE	canonical	3	46	junction_8	522.501461570922	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959341	122925783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938672_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_141754_1425	chr5	-	2438	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	61	261	1	1	multi-exon	FALSE	canonical	3	1165	junction_8	284.126264845403	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGTTTTTTTTTATTTT	NA	False	NA	-16	True	AATAAA	-23	NA	122959341	122925782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_141755_382	chr5	-	2457	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	32	271	-13	1	multi-exon	FALSE	canonical	3	1165	junction_8	284.126264845403	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCTGAAGTGGGTTTT	NA	False	NA	-26	True	AATAAA	-13	NA	122959370	122925792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_141757_44	chr5	-	2690	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	61	9	1	-9	multi-exon	TRUE	canonical	3	1165	junction_8	284.126264845403	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACCTGTGCATCC	NA	False	NA	NA	False	NA	NA	NA	122959341	122925530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_141776_46	chr5	-	1419	7	FSM	ENSMUSG00000029472.14	ENSMUST00000200058.5	1174	7	-262	17	0	-17	multi-exon	FALSE	canonical	3	1753	junction_2	189.823382823789	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAGAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-9	NA	122959343	122943923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_141789_612	chr5	-	3533	12	FSM	ENSMUSG00000029475.18	ENSMUST00000031435.14	3532	12	-11	10	-11	1	multi-exon	FALSE	canonical	3	252	junction_11	40.2726246663991	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTACACTGT	8583	False	NA	NA	False	TATAAA	-11	NA	123038429	123008740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
Isoform_141795_163	chr5	-	3635	13	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-30	1	intron_retention	FALSE	canonical	3	58	junction_12	99.7441170640599	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTACACTGT	NA	False	NA	NA	False	TATAAA	-11	NA	123060200	123008740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
Isoform_141802_10	chr5	-	3419	11	NIC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-11	1	intron_retention	FALSE	canonical	2	8	junction_6	104.312031904282	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTACACTGT	8583	False	NA	NA	False	TATAAA	-11	NA	123038429	123008740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
Isoform_141807_8	chr5	-	1940	5	FSM	ENSMUSG00000029449.12	ENSMUST00000031401.6	2208	5	264	4	1	-4	multi-exon	TRUE	canonical	1	1	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATCATGTAATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123270491	123256244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123257658_123258358_123258494_123258573_123258684_123269929_123270018_123270297
Isoform_141808_3	chr5	-	4554	2	FSM	ENSMUSG00000090086.8	ENSMUST00000160099.2	1017	2	201	-3738	201	-10	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAATGAGTGAGTT	NA	False	NA	-9	True	AATAAA	-10	NA	123278151	123271795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123276130_123277931
Isoform_141813_376	chr5	-	1333	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	44	199	1	-199	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTTCAGGCTGTC	8966	False	NA	-9	True	ATTAAA	-20	NA	123662195	123649966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_141815_215	chr5	-	1532	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	44	0	1	0	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTTTCAGAATTGTT	8966	False	NA	-12	True	AATAAA	-25	NA	123662195	123649767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_141817_7	chr5	-	1685	5	FSM	ENSMUSG00000029433.17	ENSMUST00000139398.8	1663	5	-20	-2	14	2	multi-exon	FALSE	canonical	3	603	junction_2	57.6649807075317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTTCAGAATTGTTTC	8936	False	NA	-10	True	AATAAA	-27	NA	123662225	123649765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123650771_123655799_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_14182_133	chr11	-	2221	2	ISM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	11	-2	11	2	intron_retention	FALSE	canonical	3	10036	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGTTGGTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	70545459	70542673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_70543048_70543612
Isoform_141821_12	chr5	-	701	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	-19	-1	-9	1	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATAACATTATTTCCTTG	8946	False	NA	NA	False	NA	NA	NA	123662215	123655647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_141824_14	chr5	-	2586	4	FSM	ENSMUSG00000029433.17	ENSMUST00000145152.8	2588	4	-22	24	-15	-24	multi-exon	FALSE	canonical	3	603	junction_1	60.8659729788875	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAGAAAGAA	8940	False	NA	NA	False	NA	NA	NA	123662221	123653889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_141831_217	chr5	-	3757	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	35	443	-24	-443	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	10002	False	NA	-11	True	ATTAAA	-20	NA	123711066	123667164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
Isoform_141832_51	chr5	-	5558	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	30	-1353	-29	1353	multi-exon	TRUE	canonical	3	140	junction_1	30.3840007240653	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGAGCAAGTGTCCCTT	9997	False	NA	-6	True	NA	NA	NA	123711071	123665368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
Isoform_141837_10	chr5	-	4353	12	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-18	-444	intron_retention	FALSE	canonical	3	161	junction_1	28.1134067014945	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTGTCTCAATTTACA	9974	False	NA	-12	True	ATTAAA	-19	NA	123711060	123667165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
Isoform_141840_7	chr5	-	8125	25	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	32	junction_10	10.473428680873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGGTTGGTTGGTTTTT	9883	False	NA	-7	True	AATAAA	-16	NA	123822407	123715859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
Isoform_141842_4	chr5	-	7902	25	NIC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-21	1	intron_retention	FALSE	canonical	3	18	junction_16	11.5125987750618	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTGGTTGGTTTTTGGC	9881	False	NA	-4	True	AATAAA	-19	NA	123822409	123715856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
Isoform_141843_6	chr5	-	6618	25	NIC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	11.5125987750618	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCGTCCTTGTTTTCTG	9888	False	NA	NA	False	AATAAA	-21	NA	123822402	123717133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
Isoform_141844_8	chr5	-	4582	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111566.9	6133	24	276	1275	-17	4	multi-exon	FALSE	canonical	3	15	junction_9	12.0135399352954	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCCTTGTTTTCTGG	9885	False	NA	NA	False	AATAAA	-22	NA	123822405	123717132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
Isoform_141855_187	chr5	-	2806	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	18	1462	18	35	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGACTTGGGTAGATAT	6415	False	NA	-3	True	AATAAA	-20	NA	123859089	123837826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
Isoform_141856_955	chr5	-	2723	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	101	1462	-81	35	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGACTTGGGTAGATAT	6498	False	NA	-3	True	AATAAA	-20	NA	123859006	123837826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
Isoform_141862_25	chr5	-	4194	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	101	-9	-81	1	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAAGTTCCTTTTTTTTTT	6498	False	NA	NA	False	AATAAA	-22	NA	123859006	123836355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
Isoform_14187_5657	chr11	-	852	3	FSM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	11	-2	11	2	multi-exon	FALSE	canonical	3	9692	junction_2	172	5657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGTTGGTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	70545459	70542673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70543048_70543612_70543806_70545174
Isoform_141870_28	chr5	-	2718	14	NNC	ENSMUSG00000029427.12	novel	4350	14	NA	NA	-81	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	111.512569939168	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAACCAAGACTTGGGT	6498	False	NA	-9	True	AATAAA	-14	NA	123859006	123837832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857599_123858785
Isoform_141877_22	chr5	-	2014	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	199.263561501216	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4356	False	NA	-8	True	AATAAA	-13	NA	123887442	123866786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
Isoform_141878_10	chr5	-	2318	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	199.263561501216	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	4350	False	NA	NA	False	AATAAA	-15	NA	123887448	123866488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
Isoform_141880_11	chr5	-	1921	11	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	166.25718029607	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4356	False	NA	-8	True	AATAAA	-13	NA	123887442	123866786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123887351
Isoform_141882_21	chr5	-	1936	11	FSM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	-8	-243	1	0	multi-exon	FALSE	canonical	3	100	junction_10	161.696753214157	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4356	False	NA	-8	True	AATAAA	-13	NA	123887442	123866786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123887351
Isoform_141883_14	chr5	-	2233	11	FSM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	-8	-540	1	-1	multi-exon	FALSE	canonical	3	100	junction_10	161.696753214157	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCATTGTATGCTATTTG	4356	False	NA	NA	False	AATAAA	-14	NA	123887442	123866489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123887351
Isoform_141885_153	chr5	-	1850	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	29	-284	1	1	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGTGTTAATTTAAGT	4350	False	NA	-7	True	AATAAA	-14	NA	123887448	123866785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
Isoform_141886_61	chr5	-	2146	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	29	-580	1	-1	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCATTGTATGCTATTTG	4350	False	NA	NA	False	AATAAA	-14	NA	123887448	123866489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
Isoform_141891_14	chr5	-	2037	12	FSM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	10	297	1	1	multi-exon	FALSE	canonical	3	64	junction_7	200.336700053759	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGTGTTAATTTAAGT	4356	False	NA	-7	True	AATAAA	-14	NA	123887442	123866785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
Isoform_141892_14	chr5	-	2333	12	FSM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	10	1	1	-1	multi-exon	FALSE	canonical	3	64	junction_7	200.336700053759	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCATTGTATGCTATTTG	4356	False	NA	NA	False	AATAAA	-14	NA	123887442	123866489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
Isoform_141893_11	chr5	-	1945	11	FSM	ENSMUSG00000029422.16	ENSMUST00000057795.12	2270	11	31	294	0	0	multi-exon	FALSE	canonical	3	64	junction_7	167.947640650293	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4354	False	NA	-8	True	AATAAA	-13	NA	123887444	123866786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
Isoform_141897_12	chr5	-	838	6	ISM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	4	7552	2	56	5prime_fragment	FALSE	canonical	3	403	junction_3	55.0730424073339	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTATCTTTTCCCATGT	4325	False	NA	NA	False	NA	NA	NA	123887473	123874621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
Isoform_141904_568	chr5	-	2507	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	15	0	3	0	multi-exon	FALSE	canonical	3	122	junction_3	15.8394724940223	568	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	2251	False	NA	-1	True	AATAAA	-20	NA	124170318	124142703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
Isoform_141907_5	chr5	-	7169	26	NIC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	8.21179639299465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	8163	False	NA	-11	True	ATTAAA	-16	NA	124387878	124256752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
Isoform_141908_3	chr5	-	6734	25	FSM	ENSMUSG00000029406.16	ENSMUST00000162812.8	6952	25	218	0	-91	0	multi-exon	FALSE	canonical	3	6	junction_8	7.71857427825171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	8436	False	NA	-11	True	ATTAAA	-16	NA	124387605	124256752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
Isoform_141909_5	chr5	-	5393	25	FSM	ENSMUSG00000029406.16	ENSMUST00000162812.8	6952	25	-45	1604	-45	0	multi-exon	FALSE	canonical	3	6	junction_8	7.71857427825171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCGGCTGCTTCCTTT	8173	False	NA	NA	False	TTTAAA	-6	NA	124387868	124258356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
Isoform_141910_4	chr5	-	1692	11	NIC	ENSMUSG00000029406.16	novel	1690	10	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	9.73447481891037	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCGCTTCAGGGGTTCTT	8445	False	NA	NA	False	AATAAA	-20	NA	124387596	124270867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_124271039_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
Isoform_141913_14	chr5	-	7689	23	FSM	ENSMUSG00000038126.18	ENSMUST00000147737.8	5959	23	-21	-1709	0	-2	multi-exon	FALSE	canonical	3	31	junction_21	7.18368790391303	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCGTGGTATCTGTGA	NA	False	NA	-6	True	NA	NA	NA	124465933	124389023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
Isoform_141914_3	chr5	-	4124	23	FSM	ENSMUSG00000038126.18	ENSMUST00000147737.8	5959	23	-107	1942	16	6	multi-exon	FALSE	canonical	3	31	junction_21	7.18368790391303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATAGACTGACATGCTA	NA	False	NA	NA	False	AATAAA	-18	NA	124466019	124392674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
Isoform_141917_11	chr5	-	7725	23	FSM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	-9	-2708	9	-1	multi-exon	FALSE	canonical	3	20	junction_21	8.45259019423842	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCGTGGTATCTGTGAG	NA	False	NA	-5	True	NA	NA	NA	124465924	124389022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
Isoform_141920_3	chr5	-	5186	6	ISM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	-9	55086	9	6435	5prime_fragment	FALSE	canonical	3	20	junction_4	11.916375287813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTCCCTGTCATACA	NA	False	NA	NA	False	NA	NA	NA	124465924	124446816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
Isoform_141923_679	chr5	-	1193	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	98	24	98	-24	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTATTACGATGT	4352	False	NA	-22	True	AATAAA	-14	NA	124492636	124483503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
Isoform_141926_157	chr5	-	1384	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	-91	22	-91	-22	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTATTACGATGTGG	4163	False	NA	-20	True	AATAAA	-16	NA	124492825	124483501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
Isoform_141927_32	chr5	-	1428	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	-137	24	-137	-24	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTATTACGATGT	4117	False	NA	-22	True	AATAAA	-14	NA	124492871	124483503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
Isoform_141956_37	chr5	-	5681	32	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	4	1369	combination_of_known_junctions	FALSE	canonical	3	34	junction_29	112.134674493331	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGTGGACTCTTGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	124563651	124511225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563509
Isoform_141960_64	chr5	-	5576	31	Fusion	ENSMUSG00002076658.1_ENSMUSG00000038095.16	novel	4170	31	NA	NA	1	1369	multi-exon	FALSE	canonical	3	85	junction_29	90.1802454347218	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGTGGACTCTTGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	124563651	124511225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
Isoform_141961_10	chr5	-	10048	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_29	90.1802454347218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGTGGTGTTGTG	NA	False	NA	43	True	AATAAA	-15	NA	124563668	124506770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
Isoform_141964_143	chr5	-	5687	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	19	4455	1	1369	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGTGGACTCTTGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	124563654	124511225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
Isoform_141965_22	chr5	-	10142	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	19	0	1	0	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGTGGTGTTGTG	NA	False	NA	43	True	AATAAA	-15	NA	124563654	124506770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
Isoform_141971_246	chr5	-	5568	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	6	1368	combination_of_known_junctions	FALSE	canonical	3	243	junction_29	68.980423954111	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563641	124511226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
Isoform_141972_45	chr5	-	10043	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	243	junction_29	68.980423954111	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGTGTTGTGGTTTGG	NA	False	NA	49	True	AATAAA	-21	NA	124563654	124506764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
Isoform_141995_36	chr5	-	1374	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	9	8	9	-8	multi-exon	FALSE	canonical	3	23	junction_1	3.55902608401044	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAATACAACGCATGT	NA	False	NA	40	True	AATAAA	-16	NA	124616420	124601335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
Isoform_141996_30	chr5	-	2313	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	-65	1	-65	-1	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTTCCTGTGTGCCTT	NA	False	NA	1	True	NA	NA	NA	124669519	124631143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
Isoform_141997_122	chr5	-	2241	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	7	1	7	-1	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTTCCTGTGTGCCTT	NA	False	NA	1	True	NA	NA	NA	124669447	124631143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
Isoform_141998_3	chr5	-	2877	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	-35	-593	-35	593	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGCTTTGTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	124669489	124630549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
Isoform_141999_15	chr5	-	1294	4	ISM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	14	21343	14	-20759	5prime_fragment	FALSE	canonical	3	33	junction_1	7.11805216802087	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGAATGTGTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	124669440	124652485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_124652807_124653580_124653700_124659313_124659465_124668737
Isoform_142002_68	chr5	-	1763	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	7	-441	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	291.131172111473	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACGGTATTGCCTCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	124717088	124708716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124716766
Isoform_142003_1098	chr5	-	1509	9	FSM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	64	440	-6	-440	multi-exon	FALSE	canonical	0	0	junction_4	226.339761199839	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717130	124708715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
Isoform_14201_551	chr11	-	1016	7	FSM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	126	17	0	-17	multi-exon	FALSE	canonical	3	730	junction_3	39.5179284207392	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGACTTGTACCTGGA	NA	False	NA	-26	True	AATAAA	-16	NA	70560116	70554613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
Isoform_142010_11	chr5	-	2320	5	NIC	ENSMUSG00000037979.14	novel	809	5	NA	NA	227	-13	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	82.6177190437983	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAACTAGATG	NA	False	NA	NA	False	NA	NA	NA	124939261	124911494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_124913356_124913543_124913631_124916006_124916049_124916724_124916872_124939078
Isoform_142012_7	chr5	-	2510	4	NIC	ENSMUSG00000037979.14	novel	2473	4	NA	NA	229	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	78.9317567410115	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTGGTGGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	124939259	124911481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_124913356_124916006_124916049_124916724_124916872_124938812
Isoform_142013_285	chr5	-	2233	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	227	13	227	-13	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAACTAGATG	NA	False	NA	NA	False	NA	NA	NA	124939261	124911494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
Isoform_142015_48	chr5	-	2508	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	-48	13	-48	-13	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAACTAGATG	NA	False	NA	NA	False	NA	NA	NA	124939536	124911494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
Isoform_142024_7	chr5	-	2426	9	ISM	ENSMUSG00000029478.17	ENSMUST00000125053.8	5672	27	17020	9	-270	0	3prime_fragment	FALSE	canonical	3	108	junction_7	15.515617132425	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	3478	False	NA	-7	True	AATATA	-10	NA	125102856	125094225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715
Isoform_142025_3	chr5	-	4099	16	NIC	ENSMUSG00000029478.17	novel	5672	27	NA	NA	-5288	-4	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	28.6725575342618	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAACGTTTCTACTCTG	NA	False	NA	-11	True	AATATA	-6	NA	125109276	125094229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078
Isoform_14203_30	chr11	-	4445	22	FSM	ENSMUSG00000040712.17	ENSMUST00000119120.2	4460	22	12	3	0	-1	multi-exon	FALSE	canonical	3	17	junction_14	5.19680697362221	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGCCTCCGGCCTCTCT	8389	False	NA	-4	True	ATTAAA	-13	NA	70578769	70560292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574177_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
Isoform_142030_5	chr5	-	8891	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	21.0932844598833	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAACGTTTCTACTCTG	NA	False	NA	-11	True	AATATA	-6	NA	125256274	125094229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
Isoform_142035_7	chr5	-	8880	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-4	-2	combination_of_known_junctions	TRUE	canonical	3	65	junction_46	20.0123225927316	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACGTTTCTACTCTGCT	NA	False	NA	-9	True	AATATA	-8	NA	125256270	125094227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
Isoform_142036_10	chr5	-	3318	22	ISM	ENSMUSG00000029478.17	ENSMUST00000111398.8	8808	48	1	30647	1	2	5prime_fragment	FALSE	canonical	3	65	junction_19	15.2093478834087	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGGGTGTCTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	125256282	125124863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
Isoform_142038_4	chr5	-	3366	22	NIC	ENSMUSG00000029478.17	novel	8808	48	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	23.1320766582151	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCAGGGTGTCTTAGTC	NA	False	NA	NA	False	NA	NA	NA	125256271	125124864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
Isoform_142042_511	chr5	-	2489	13	FSM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	31	1	8	-1	multi-exon	TRUE	canonical	3	188	junction_1	171.680966232913	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGCTTCTGTGACTGT	NA	False	NA	-2	True	AATAAA	-20	NA	125418127	125354151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
Isoform_142046_58	chr5	-	1115	4	ISM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	53569	5	-825	-5	3prime_fragment	FALSE	canonical	3	487	junction_1	96.6413760019773	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAACACTGGCTTCTGT	NA	False	NA	-8	True	AATAAA	-14	NA	125364566	125354157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422
Isoform_14205_3	chr11	-	1064	7	FSM	ENSMUSG00000057054.12	ENSMUST00000108542.8	1080	7	5	11	5	-3	multi-exon	FALSE	canonical	1	2	junction_5	4.07226390762354	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTGTTTCTGTGCGA	NA	False	NA	NA	False	ATTAAA	-10	NA	70590976	70579197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70579576_70579810_70579971_70580571_70580766_70581008_70581049_70581264_70581379_70586689_70586775_70590883
Isoform_142050_296	chr5	-	2398	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	-33	2	-10	-2	multi-exon	FALSE	canonical	3	487	junction_1	58.8981471316135	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACACTGGCTTCTGTGAC	NA	False	NA	-5	True	AATAAA	-17	NA	125418168	125354154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
Isoform_142051_1176	chr5	-	2360	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	8	-1	8	-1	multi-exon	FALSE	canonical	3	487	junction_1	58.8981471316135	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGCTTCTGTGACTGT	NA	False	NA	-2	True	AATAAA	-20	NA	125418127	125354151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
Isoform_142056_31	chr5	-	2169	11	FSM	ENSMUSG00000037936.16	ENSMUST00000148373.8	2082	11	-62	-25	-10	25	multi-exon	FALSE	canonical	3	583	junction_7	41.8812607260097	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATTTAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	125418145	125360393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
Isoform_142063_5	chr5	-	2452	3	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCTTCATTTGTGTTG	NA	False	NA	-11	True	AATAAA	-15	NA	125467092	125463039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_125463047_125463215_125465329_125466760
Isoform_142066_285	chr5	-	4213	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	0	547	0	383	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	125511185	125491468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
Isoform_142067_21	chr5	-	4727	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	33	0	33	0	multi-exon	TRUE	canonical	3	122	junction_21	17.4191708985502	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGACTATGCTCTTGATC	NA	False	NA	NA	False	AGTAAA	-16	NA	125511152	125490921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
Isoform_142068_26	chr5	-	4244	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	-31	547	-31	383	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	125511216	125491468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
Isoform_142073_6	chr5	-	4086	26	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	33	385	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	34.6997636879561	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTATTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	125511152	125491466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
Isoform_142076_5	chr5	-	1849	12	ISM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	33	10538	33	-833	5prime_fragment	FALSE	canonical	3	122	junction_6	19.0874455732661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAGTGTGTGTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	125511152	125501459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
Isoform_142080_70	chr5	-	2637	8	FSM	ENSMUSG00000029416.18	ENSMUST00000153832.8	2673	8	39	-3	2	0	multi-exon	FALSE	canonical	3	33	junction_6	28.9418840620514	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	-5	True	TATAAA	-18	NA	127694443	127672727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127685835_127686126_127693878
Isoform_142081_4	chr5	-	2161	8	NIC	ENSMUSG00000029416.18	novel	2673	8	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	43.4295112680259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGAGCTTCCTGATGGT	NA	False	NA	-6	True	TATAAA	-17	NA	127709987	127672728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127685835_127686126_127709897
Isoform_142082_74	chr5	-	2734	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	-2	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	-5	True	TATAAA	-18	NA	127694482	127672727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
Isoform_142083_210	chr5	-	2695	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	37	0	2	0	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	-5	True	TATAAA	-18	NA	127694443	127672727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
Isoform_142085_4	chr5	-	2551	7	NIC	ENSMUSG00000029416.18	novel	2732	8	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	40.8387751475917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAAGAGCTTCCTGATG	NA	False	NA	-8	True	TATAAA	-15	NA	127694461	127672730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_127673837_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
Isoform_142086_3	chr5	-	442	3	NIC	ENSMUSG00000072591.11	novel	2429	6	NA	NA	6327	7	intron_retention	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCCAGATGTGTGTG	NA	False	NA	NA	False	AATAAA	-43	NA	128671391	128656162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_128656350_128662335_128662471_128671271
Isoform_142087_47	chr5	-	2933	11	FSM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	-3	9	-3	-3	multi-exon	FALSE	canonical	3	41	junction_2	6.30555310817378	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAAATCGTTTGTGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	129085641	129061629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
Isoform_142088_105	chr5	-	2886	11	FSM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	44	9	5	-3	multi-exon	FALSE	canonical	3	41	junction_2	6.30555310817378	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAAATCGTTTGTGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	129085594	129061629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
Isoform_142089_3	chr5	-	5148	9	NIC	ENSMUSG00000029428.14	novel	2769	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	44	junction_2	6.15299723711948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAATCGTTTGTGCCTC	NA	False	NA	NA	False	ATTAAA	-20	NA	129085608	129061627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
Isoform_142090_4	chr5	-	1063	9	ISM	ENSMUSG00000029428.14	ENSMUST00000100680.10	2769	10	-22	4099	-8	3	5prime_fragment	FALSE	canonical	3	44	junction_2	6.15299723711948	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCTTATTTGTATATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	129085621	129065725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
Isoform_142091_3	chr5	-	1595	8	FSM	ENSMUSG00000029428.14	ENSMUST00000151712.6	1127	8	10	-478	-4	478	multi-exon	FALSE	canonical	3	44	junction_1	6.09449400220044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGGGTGTGTATGCACG	NA	False	NA	NA	False	AAAAAG	-2	NA	129085603	129067226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
Isoform_142092_27	chr5	-	3635	3	FSM	ENSMUSG00000051034.8	ENSMUST00000049778.7	3929	3	9	285	9	-285	multi-exon	FALSE	canonical	3	10	junction_2	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTATACATTTGGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	129747154	129731941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129735450_129737833_129737930_129747123
Isoform_142093_5	chr5	-	3946	3	FSM	ENSMUSG00000051034.8	ENSMUST00000049778.7	3929	3	-16	-1	-16	1	multi-exon	TRUE	canonical	3	10	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGAAACAGCCTCATGG	NA	False	NA	NA	False	AATAAA	-23	NA	129747179	129731655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129735450_129737833_129737930_129747123
Isoform_142098_2057	chr5	-	1151	6	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8199	6	-37	-6	3prime_fragment	FALSE	canonical	3	674	junction_1	180.962537559573	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGATTCAGTAGTTTT	NA	False	NA	-8	True	ATTAAA	-16	NA	129856314	129842627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
Isoform_14210_638	chr11	-	2412	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-3	-20	2	0	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860783	70833907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
Isoform_142101_67	chr5	-	1485	8	FSM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	250	-2	8	2	multi-exon	FALSE	canonical	3	66	junction_7	460.03695503731	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTAGTTTTAAGTGAAT	9007	False	NA	0	True	ATTAAA	-24	NA	129864263	129842619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085_129856313_129856425_129856509_129864018
Isoform_142111_9	chr5	-	2338	8	ISM	ENSMUSG00000025537.13	ENSMUST00000026617.13	2374	10	4991	11	13	-11	3prime_fragment	FALSE	canonical	3	15	junction_6	2.74791200881019	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	129902933	129892272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509
Isoform_142113_3	chr5	-	2244	10	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-1179	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.58653778449403	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGGATTTA	NA	False	NA	NA	False	NA	NA	NA	129904125	129892274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509_129902689_129903062_129903180_129904089
Isoform_142114_5	chr5	-	2248	9	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-11	-13	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	4.49305018890286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGGATTTA	NA	False	NA	NA	False	NA	NA	NA	129902957	129892274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509_129902689_129902800
Isoform_142122_3809	chr5	-	730	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	181	4	-16	-1	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	3809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGGTAGCGTCCTTA	2245	False	NA	-7	True	AATAAA	-14	NA	129916130	129910000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
Isoform_142123_254	chr5	-	779	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	132	4	-65	-1	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGGTAGCGTCCTTA	2196	False	NA	-7	True	AATAAA	-14	NA	129916179	129910000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
Isoform_142129_378	chr5	-	2495	12	FSM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	182	10	-2	2	multi-exon	FALSE	canonical	3	83	junction_6	16.6092675514317	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	130031708	130017861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
Isoform_142132_6	chr5	-	2328	11	FSM	ENSMUSG00000025534.18	ENSMUST00000201801.4	2272	11	-44	-12	-7	0	multi-exon	TRUE	canonical	3	14	junction_9	32.1249124512426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130031713	130017851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029597_130029784_130031447
Isoform_142134_7	chr5	-	1098	4	FSM	ENSMUSG00000025534.18	ENSMUST00000111308.8	2038	4	0	940	0	0	multi-exon	FALSE	canonical	3	115	junction_2	11.5854314646552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTCGCTATTGTCTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	130031706	130028439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_130028911_130029201_130029384_130029597_130029784_130031447
Isoform_142136_39	chr5	-	1725	16	FSM	ENSMUSG00000025533.16	ENSMUST00000160129.8	2413	16	696	-8	-6	-1	multi-exon	FALSE	canonical	1	102	junction_3	47.1472398155207	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGCTTCTGCCTGTGGTC	NA	False	NA	-2	True	AATAAA	-29	NA	130053164	130040336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882
Isoform_142138_14	chr5	-	1605	17	NIC	ENSMUSG00000025533.16	novel	2413	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_16	77.2141654345237	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130053163	130040344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053048
Isoform_142139_404	chr5	-	1543	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	36	245	0	1	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGCATATGCTTCTGCC	NA	False	NA	-9	True	AATAAA	-22	NA	130053186	130040343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
Isoform_142140_12	chr5	-	1785	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	38	1	2	-1	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGAGAGATGTGTCAG	NA	False	NA	NA	False	CATAAA	-20	NA	130053184	130040099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
Isoform_142145_14	chr5	-	1387	5	NIC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-25	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	356.535411985962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGCTTGCATTTCTA	NA	False	NA	-2	True	AATAAA	-15	NA	130284271	130274573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282851_130284050
Isoform_142152_360	chr5	-	1504	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	42	2	4	-2	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGCTTGCATTTCTA	NA	False	NA	-2	True	AATAAA	-15	NA	130284329	130274573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
Isoform_142163_5	chr5	-	6223	14	NIC	ENSMUSG00000029673.20	novel	3572	17	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	12.2285919687616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCAGATGTTTCTTTGT	NA	False	NA	-5	True	ATTAAA	-14	NA	131567543	131466170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501075_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
Isoform_142164_3	chr5	-	6223	14	FSM	ENSMUSG00000029673.20	ENSMUST00000161374.8	4217	14	-42	-1964	-42	-1	multi-exon	FALSE	canonical	3	21	junction_11	11.7397821618248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCAGATGTTTCTTTG	NA	False	NA	-6	True	ATTAAA	-13	NA	131567568	131466171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
Isoform_142165_8	chr5	-	6261	14	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-78	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	9.03379584978658	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCAGATGTTTCTTT	NA	False	NA	-7	True	ATTAAA	-12	NA	131567604	131466172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
Isoform_142169_1233	chr5	-	2304	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	0	17	0	-17	multi-exon	FALSE	canonical	3	313	junction_2	26.6850145212627	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGGTCTTGTAAAAGTT	NA	False	NA	-13	True	AATAAA	-25	NA	134205613	134176909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
Isoform_14217_532	chr11	-	2428	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	16	9	2	1	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTGACTTTGCTTTAC	NA	False	NA	-8	True	AATAAA	-40	NA	70860783	70833906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
Isoform_142178_52	chr5	-	2142	10	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	-3	-8	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	114.615083143322	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAAAGTTTGACTTGAT	NA	False	NA	-4	True	AATAAA	-34	NA	134205616	134176900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134177846_134182962_134183049_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
Isoform_142192_190	chr5	-	4349	34	FSM	ENSMUSG00000060261.17	ENSMUST00000111261.12	4381	34	27	5	1	0	multi-exon	FALSE	canonical	3	228	junction_23	69.7198249746108	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	662	False	NA	-11	True	AATAAA	-23	NA	134343573	134266695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
Isoform_142198_127	chr5	-	4284	33	NIC	ENSMUSG00000060261.17	novel	4021	33	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_23	67.772417589588	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	663	False	NA	-12	True	AATAAA	-22	NA	134343572	134266696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
Isoform_14220_15	chr11	-	2654	16	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	-4	1	intron_retention	FALSE	canonical	3	678	junction_10	72.5416661880146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTGACTTTGCTTTAC	NA	False	NA	-8	True	AATAAA	-40	NA	70860792	70833906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
Isoform_142203_29	chr5	-	4231	32	NIC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_23	87.7984282082411	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	665	False	NA	-6	True	AATAAA	-28	NA	134343570	134266690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
Isoform_142210_128	chr5	-	4350	34	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	192	junction_8	75.7046966966276	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	678	False	NA	-6	True	AATAAA	-28	NA	134343557	134266690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
Isoform_142215_106	chr5	-	4302	33	FSM	ENSMUSG00000060261.17	ENSMUST00000173341.9	4302	33	2	-2	2	0	multi-exon	FALSE	canonical	3	192	junction_8	74.2225788486058	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	663	False	NA	-6	True	AATAAA	-28	NA	134343572	134266690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
Isoform_142221_22	chr5	-	4254	32	NIC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_23	92.9314137344788	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	649	False	NA	-11	True	AATAAA	-23	NA	134343586	134266695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
Isoform_142223_6	chr5	+	4276	3	Antisense	novelGene_ENSMUSG00000107000.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134292588	134299572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_134292623_134294590_134294657_134295396
Isoform_142225_6	chr5	-	3527	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	64.6651288476942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCGTCACTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	134485121	134386514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
Isoform_142226_15	chr5	-	3566	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	59.5236274282929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485574	134386531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142227_38	chr5	-	3539	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_30	59.8322562577151	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485130	134386532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
Isoform_142229_45	chr5	-	3625	31	FSM	ENSMUSG00000023079.15	ENSMUST00000073161.12	3572	31	-55	2	-27	0	multi-exon	FALSE	canonical	3	65	junction_9	54.133743840808	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGCGTCACTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	134485597	134386516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142230_55	chr5	-	3573	31	FSM	ENSMUSG00000023079.15	ENSMUST00000073161.12	3572	31	-18	17	10	1	multi-exon	FALSE	canonical	3	65	junction_9	54.133743840808	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485560	134386531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142235_5	chr5	-	3718	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	64.2361009609602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGCGTCACTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	134485591	134386516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142239_117	chr5	-	3495	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	7	22	7	1	multi-exon	FALSE	canonical	3	127	junction_8	45.8592169193566	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485563	134386531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142240_59	chr5	-	3529	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	-27	22	-27	1	multi-exon	FALSE	canonical	3	127	junction_8	45.8592169193566	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485597	134386531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142241_6	chr5	-	3621	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	-119	22	-119	1	multi-exon	FALSE	canonical	3	127	junction_8	45.8592169193566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485689	134386531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142243_9	chr5	-	3538	30	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	63.8779677833694	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485110	134386531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
Isoform_142244_17	chr5	-	3664	30	NIC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-49	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	58.3892999172587	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAAGCGTCACTTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	134485619	134386517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142245_6	chr5	-	3448	29	FSM	ENSMUSG00000023079.15	ENSMUST00000111245.9	3299	29	-130	-19	-3	1	multi-exon	FALSE	canonical	3	16	junction_11	59.2579431513667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485573	134386531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142248_11	chr5	-	4633	29	FSM	ENSMUSG00000023079.15	ENSMUST00000100650.10	3487	29	-170	-976	-40	1	multi-exon	FALSE	canonical	3	127	junction_7	45.9988353889841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485610	134386531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_142258_2168	chr5	-	2405	7	FSM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	166	155	1	1	multi-exon	FALSE	canonical	3	761	junction_3	647.667803224256	2168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	2203	False	NA	-3	True	AATAAA	-19	NA	134668178	134648729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
Isoform_142269_4355	chr5	-	2345	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	23	-1	1	1	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	4355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	2203	False	NA	-3	True	AATAAA	-19	NA	134668178	134648729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
Isoform_142271_130	chr5	-	2399	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	-31	-1	-31	1	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	9990	False	NA	-3	True	AATAAA	-19	NA	134668232	134648729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
Isoform_14228_14	chr11	-	2968	16	NIC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	409	junction_5	124.646950312562	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860783	70833907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
Isoform_142284_166	chr5	-	3345	16	FSM	ENSMUSG00000029674.14	ENSMUST00000015137.10	3331	16	-14	0	-14	0	multi-exon	FALSE	canonical	2	10	junction_14	3.46794848097065	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTGTGTGTGTCTGAG	5752	False	NA	0	True	AATAAA	-33	NA	134717466	134684892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
Isoform_142286_16	chr5	-	3407	16	FSM	ENSMUSG00000029674.14	ENSMUST00000015137.10	3331	16	-90	14	-90	-13	multi-exon	FALSE	canonical	2	10	junction_14	3.46794848097065	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGGGGCTTGCATCCTCG	5676	False	NA	-14	True	AATAAA	-19	NA	134717542	134684906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
Isoform_142287_4	chr5	-	437	3	FSM	ENSMUSG00000085042.9	ENSMUST00000222613.2	363	3	-2	-72	-2	0	multi-exon	FALSE	canonical	3	24	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCCGTGCCCCTGAGT	NA	False	NA	0	True	ATTAAA	-29	NA	135041644	135040967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135041187_135041283_135041405_135041547
Isoform_142288_3	chr5	-	501	2	ISM	ENSMUSG00000085042.9	ENSMUST00000154060.2	594	3	400	-11	34	3	3prime_fragment	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGCCCCTGAGTTTT	NA	False	NA	3	True	ATTAAA	-32	NA	135041608	135040964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_135041405_135041547
Isoform_14229_14	chr11	-	2988	16	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	352	junction_5	136.473424356376	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860783	70833902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
Isoform_142294_1136	chr5	-	1282	12	ISM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	580	2	4	0	3prime_fragment	FALSE	canonical	3	942	junction_2	58.9567708278386	1136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092940	135081812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
Isoform_142299_19	chr5	-	1546	4	FSM	ENSMUSG00000043614.14	ENSMUST00000067935.11	1544	4	-5	3	-5	0	multi-exon	FALSE	canonical	3	21	junction_3	2.86744175568088	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATGCCCCGCCTCCTC	NA	False	NA	-5	True	NA	NA	NA	135107125	135101756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135102838_135103247_135103331_135105311_135105484_135106915
Isoform_142302_774	chr5	-	1411	9	FSM	ENSMUSG00000040013.12	ENSMUST00000044972.11	1447	9	36	0	6	0	multi-exon	FALSE	canonical	3	793	junction_1	94.8445273856114	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378862	135320557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_142303_26	chr5	-	1486	9	FSM	ENSMUSG00000040013.12	ENSMUST00000044972.11	1447	9	-43	4	-43	-4	multi-exon	FALSE	canonical	3	793	junction_1	94.8445273856114	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCAGTACAATTC	NA	False	NA	-5	True	AATAAA	-16	NA	135378941	135320561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_142304_26	chr5	-	1311	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201791.4	1297	8	-15	1	14	-1	multi-exon	FALSE	canonical	3	68	junction_4	339.384075967639	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGCAGTACAATTCATT	NA	False	NA	-2	True	AATAAA	-19	NA	135378883	135320558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_142305_26	chr5	-	1294	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201791.4	1297	8	3	0	3	0	multi-exon	FALSE	canonical	3	68	junction_4	339.384075967639	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378865	135320557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_142307_385	chr5	-	1278	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	8	1	8	-1	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGTCATTAGTGTGAC	NA	False	NA	-4	True	ATTAAA	-23	NA	135378889	135366220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_142309_16	chr5	-	1127	7	ISM	ENSMUSG00000040013.12	ENSMUST00000201791.4	1297	8	3	45670	3	-8	5prime_fragment	FALSE	canonical	3	68	junction_3	365.317061681433	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGAACTGAAGTCATTA	NA	False	NA	-11	True	ATTAAA	-16	NA	135378865	135366227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_142326_242	chr5	-	5571	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	8	1	8	-1	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGTTTGCCCTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	135423392	135404995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
Isoform_142335_18	chr5	-	5120	13	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	-10268	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	57.0109029533435	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGTTTGCCCTTTAT	1473	False	NA	-6	True	AATAAA	-17	NA	135433668	135404995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135433517
Isoform_142338_67	chr5	-	3892	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-3622	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9611	False	NA	-1	True	TATAAA	-28	NA	135518111	135439010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142339_12	chr5	-	4070	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-177	-3622	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9433	False	NA	-1	True	TATAAA	-28	NA	135518289	135439010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142340_29	chr5	-	4871	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-2643	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCACTATCATTTTTA	9611	False	NA	-7	True	AATAAA	-16	NA	135518111	135438031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142344_12	chr5	-	7514	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCTGGTGATAAAGGG	9611	False	NA	-2	True	AATAAA	-20	NA	135518111	135435388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142348_90	chr5	-	3916	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-3622	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9611	False	NA	-1	True	TATAAA	-28	NA	135518111	135439010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142349_36	chr5	-	4896	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-2642	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCACTATCATTTTTAA	9611	False	NA	-6	True	AATAAA	-17	NA	135518111	135438030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142352_17	chr5	-	4121	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-204	-3622	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9406	False	NA	-1	True	TATAAA	-28	NA	135518316	135439010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142356_16	chr5	-	5186	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-2643	intron_retention	FALSE	canonical	2	76	junction_15	42.4266818562722	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCACTATCATTTTTA	9611	False	NA	-7	True	AATAAA	-16	NA	135518111	135438031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142357_22	chr5	-	4207	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-3622	intron_retention	FALSE	canonical	2	76	junction_15	42.4266818562722	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9611	False	NA	-1	True	TATAAA	-28	NA	135518111	135439010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_14236_5967	chr11	-	1125	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	32	18	13	-6	multi-exon	FALSE	canonical	3	4814	junction_4	225.05234946563	5967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCCAGGAAAGTTGAGG	NA	False	NA	32	True	AATAAA	-14	NA	70873820	70868679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
Isoform_142360_11	chr5	-	7792	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	39	1	intron_retention	TRUE	canonical	2	76	junction_15	42.4266818562722	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTGGTGATAAAGGGC	9649	False	NA	-1	True	AATAAA	-21	NA	135518073	135435387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142363_46	chr5	-	4247	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-15	-3622	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9595	False	NA	-1	True	TATAAA	-28	NA	135518127	135439010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142366_31	chr5	-	5208	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-2645	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGCCACTATCATTTT	9611	False	NA	-9	True	AATAAA	-14	NA	135518111	135438033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_14237_2211	chr11	-	1162	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	3	10	3	2	multi-exon	FALSE	canonical	3	4814	junction_4	225.05234946563	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTTGAGGTTCTTTCG	NA	False	NA	-36	True	AATAAA	-22	NA	70873849	70868671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
Isoform_142370_22	chr5	-	7855	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-6	-5	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGAACTCTGGTGATA	9604	False	NA	-7	True	AATAAA	-15	NA	135518118	135435393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142377_6	chr5	-	1560	13	NIC	ENSMUSG00000039959.14	novel	3253	13	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	2	166	junction_11	29.2616311157727	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTCTCAATTAGAATTTG	9619	False	NA	NA	False	AATAAA	-13	NA	135518103	135464970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_142378_485	chr5	-	1360	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	195	4	-45	-4	multi-exon	FALSE	canonical	3	674	junction_10	35.0345756018723	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCTGATGGACTGTGGA	5258	False	NA	-8	True	AATAAA	-17	NA	135773107	135764342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
Isoform_142381_5807	chr5	-	3520	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_1	0	5807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	NA	False	NA	-26	True	AATAAA	-14	NA	135963453	135937262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135940506_135963176
Isoform_142383_184	chr5	-	3579	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	-59	0	-42	0	multi-exon	FALSE	canonical	3	925	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	NA	False	NA	-26	True	AATAAA	-14	NA	135963512	135937262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135940506_135963176
Isoform_142394_5	chr5	-	2797	11	FSM	ENSMUSG00000029699.14	ENSMUST00000111152.8	2745	11	-51	-1	-17	1	multi-exon	TRUE	canonical	1	1	junction_8	4.62709412050371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAACTGAGGTCATTG	NA	False	NA	-6	True	AATAAA	-17	NA	136003402	135989075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135990063_135990742_135990821_135991776_135992089_135992209_135992285_135993472_135993551_135994424_135994740_135994928_135995007_135996591_135996898_135997077_135997114_135999035_135999281_136003115
Isoform_142395_5	chr5	-	2823	11	NIC	ENSMUSG00000029699.14	novel	2745	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	4.80520551069359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTAACTGAGGTCATT	NA	False	NA	-7	True	AATAAA	-16	NA	136003390	135989076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_135990063_135990742_135990821_135991776_135992089_135992209_135992285_135993472_135993551_135994424_135994740_135994928_135995007_135996591_135996898_135997077_135997114_135999035_135999320_136003115
Isoform_142404_1468	chr5	-	2166	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	13	294	1	1	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	1468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTGGGAAATGAGTGT	6697	False	NA	-10	True	ATTAAA	-20	NA	136164915	136151919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
Isoform_142411_6	chr5	-	3113	3	FSM	ENSMUSG00000039747.12	ENSMUST00000041048.6	3908	3	58	737	-21	-732	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGAGTCCACTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	136199509	136177049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136179807_136190340_136190579_136199391
Isoform_142413_11	chr5	-	3868	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	29	-4	-24	4	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTTAGTGTTTGATC	NA	False	NA	1	True	NA	NA	NA	136227788	136206976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
Isoform_142414_442	chr5	-	905	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	29	2959	-24	-2	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCTTGTCCACACGTG	NA	False	NA	-15	True	AGTAAA	-14	NA	136227788	136209939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
Isoform_142415_15	chr5	-	1634	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	28	2231	-25	726	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGACTGAGTTTACGCC	NA	False	NA	NA	False	CATAAA	-12	NA	136227789	136209211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
Isoform_142416_8	chr5	-	3185	5	NIC	ENSMUSG00000039737.12	novel	3893	6	NA	NA	-22	0	intron_retention	FALSE	canonical	3	535	junction_2	13.3860935302276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTTGTCCACACGTGCG	NA	False	NA	-13	True	AGTAAA	-16	NA	136227786	136209937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_136210351_136218405_136220840_136223150_136223252_136226633_136226713_136227628
Isoform_142419_18	chr5	-	2869	9	FSM	ENSMUSG00000005057.14	ENSMUST00000005188.14	2848	9	-21	0	-21	0	multi-exon	TRUE	canonical	1	1	junction_1	2.73861278752583	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTGCTCTCCTGTGGTC	2481	False	NA	NA	False	ATTAAA	-20	NA	136273778	136247002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136248007_136248495_136248668_136250701_136250911_136253008_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
Isoform_142420_4	chr5	-	1888	6	FSM	ENSMUSG00000005057.14	ENSMUST00000196447.2	1783	6	-110	5	-44	-5	multi-exon	FALSE	canonical	2	3	junction_1	2.0591260281974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTTCTTTCTGAACTT	2458	False	NA	NA	False	NA	NA	NA	136273801	136252627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
Isoform_142422_64	chr5	-	3073	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	-242	0	-16	0	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596360	136276988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_142428_3	chr5	-	3067	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	-4	-232	-4	232	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACAACCTGTTGGATCT	NA	False	NA	NA	False	AATATA	-11	NA	136596122	136276756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_142430_28	chr5	-	2837	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	-16	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	19.9470373118581	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596118	136276988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_142432_22	chr5	-	3096	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	-276	1	-34	-1	multi-exon	FALSE	canonical	3	30	junction_13	19.9470373118581	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGTCTTTTATTCTGT	NA	False	NA	-2	True	AATAAA	-17	NA	136596378	136276989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_142436_7	chr5	-	2890	23	NIC	ENSMUSG00000029705.18	novel	2821	23	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	22.7204080541869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGGGGTCTTTTATTCT	NA	False	NA	-4	True	AATAAA	-15	NA	136596102	136276991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355865_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_142439_3	chr5	-	3099	23	NIC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	22.7204080541869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596308	136276988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355865_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_142441_4	chr5	-	3029	3	NNC	ENSMUSG00000029705.18	novel	3290	2	NA	NA	5	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	63	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCCCCCCAAAAAAAAGAA	NA	False	NA	NA	False	CATAAA	-27	NA	136596112	136511737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_136512190_136512209_136514706_136596031
Isoform_142442_3	chr5	-	3349	3	NNC	ENSMUSG00000029705.18	novel	3290	2	NA	NA	-81	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	63	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	CATAAA	-36	NA	136596425	136511728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_136512190_136512211_136514706_136596031
Isoform_142443_8	chr5	-	2076	8	ISM	ENSMUSG00000004415.16	ENSMUST00000057497.13	2724	13	128032	6	303	-6	3prime_fragment	FALSE	canonical	3	37	junction_4	3.15581743348207	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGTCTTTCTGTGGCT	NA	False	NA	-6	True	AATAAA	-13	NA	136783943	136770618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768
Isoform_142444_87	chr5	-	2363	11	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-9698	-5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	9.19565114605812	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTCTTTCTGTGGCTT	941	False	NA	-5	True	AATAAA	-14	NA	136811598	136770617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136783868_136786485_136786643_136794155_136794218_136811455
Isoform_142445_13	chr5	-	2410	11	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-9744	-4	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	9.19565114605812	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTTTCTGTGGCTTG	895	False	NA	-4	True	AATAAA	-15	NA	136811644	136770616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136783868_136786485_136786643_136794155_136794218_136811455
Isoform_142447_4	chr5	-	771	5	ISM	ENSMUSG00000059518.15	ENSMUST00000111091.8	1070	6	975	-121	572	-6	3prime_fragment	FALSE	canonical	1	15	junction_4	127.533083942952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCCTGCCTGCTCAT	NA	False	NA	-4	True	AATAAA	-12	NA	137015111	137011053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137014979
Isoform_142449_32	chr5	-	680	5	FSM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	50	10	-22	-6	multi-exon	FALSE	canonical	3	69	junction_4	104.169033306449	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCCTGCCTGCTCAT	NA	False	NA	-4	True	AATAAA	-12	NA	137015705	137011053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137015664
Isoform_142450_16	chr5	-	975	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	197	36	197	-6	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCCTGCCTGCTCAT	NA	False	NA	-4	True	AATAAA	-12	NA	137016678	137011053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
Isoform_142451_100	chr5	-	669	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	503	36	-10	-6	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCCTGCCTGCTCAT	NA	False	NA	-4	True	AATAAA	-12	NA	137016372	137011053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
Isoform_142456_4	chr5	-	3203	3	ISM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	36	-102	1	0	intron_retention	FALSE	canonical	3	303	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	2	True	AATAAA	-18	NA	137016361	137011047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_137011542_137011721_137011802_137013732
Isoform_142457_6	chr5	-	791	4	FSM	ENSMUSG00000059518.15	ENSMUST00000034953.14	764	4	-29	2	-29	-2	multi-exon	FALSE	canonical	3	69	junction_3	111.749720357592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTGCTCATTCTG	NA	False	NA	0	True	AATAAA	-16	NA	137015712	137011049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137011542_137011721_137011802_137013732_137013904_137015664
Isoform_142458_10	chr5	-	772	4	FSM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	22	-96	-13	-6	multi-exon	FALSE	canonical	0	0	junction_3	144.270579121316	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCCTGCCTGCTCAT	NA	False	NA	-4	True	AATAAA	-12	NA	137016375	137011053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137011542_137011721_137011802_137013732_137013904_137016342
Isoform_142464_41	chr5	-	1318	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	30	5	30	-5	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTTTGCCTTGGCTTT	NA	False	NA	-4	True	AATAAA	-20	NA	137074959	137063851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
Isoform_142465_835	chr5	-	1258	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	90	5	-3	-5	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTTTGCCTTGGCTTT	NA	False	NA	-4	True	AATAAA	-20	NA	137074899	137063851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
Isoform_142472_105	chr5	-	2966	20	FSM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	11	-5	11	1	multi-exon	FALSE	canonical	3	165	junction_3	165.9658376889	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTGTATGTCCCT	8276	False	NA	-7	True	AGTAAA	-23	NA	137305917	137293971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_142473_22	chr5	-	3018	20	FSM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	-36	-10	-28	-1	multi-exon	FALSE	canonical	3	165	junction_3	165.9658376889	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTATGTCCCTTCCCA	8229	False	NA	-2	True	AGTAAA	-28	NA	137305964	137293966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_142488_78	chr5	-	3025	20	FSM	ENSMUSG00000037364.13	ENSMUST00000199243.5	2988	20	-36	-1	-28	1	multi-exon	FALSE	non_canonical	0	0	junction_3	194.772841622735	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTGTATGTCCCT	8229	False	NA	-7	True	AGTAAA	-23	NA	137305964	137293971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_142492_52	chr5	-	2973	20	NNC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	246.527585506191	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTGCTGTATGTCC	8277	False	NA	-9	True	AGTAAA	-21	NA	137305916	137293973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301301_137305307_137305448_137305685
Isoform_142496_138	chr5	-	2981	20	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	165	junction_3	155.869662861488	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAACTGTGTGCTGTAT	8276	False	NA	-13	True	AGTAAA	-17	NA	137305917	137293977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_142497_37	chr5	-	3019	20	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_3	155.869662861488	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8243	False	NA	-8	True	AGTAAA	-22	NA	137305950	137293972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_142500_19	chr5	-	2976	20	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	219.570482250917	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8278	False	NA	-14	True	AGTAAA	-16	NA	137305915	137293978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301301_137305307_137305448_137305685
Isoform_14251_133	chr11	-	5186	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-5	3	-5	-3	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTGGTATCCAGCAT	NA	False	NA	-1	True	ATTAAA	-27	NA	70895268	70874919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
Isoform_142513_22	chr5	-	3002	19	ISM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	254	6	1	1	3prime_fragment	FALSE	non_canonical	0	0	junction_3	191.217581775962	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTGTATGTCCCT	8511	False	NA	-7	True	AGTAAA	-23	NA	137305682	137293971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307
Isoform_142516_577	chr5	-	2999	20	FSM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	19	6	11	1	multi-exon	FALSE	non_canonical	0	0	junction_3	186.551382419291	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTGTATGTCCCT	8276	False	NA	-7	True	AGTAAA	-23	NA	137305917	137293971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_142517_115	chr5	-	3044	20	FSM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	-28	8	-28	-1	multi-exon	FALSE	non_canonical	0	0	junction_3	186.551382419291	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTGCTGTATGTCC	8229	False	NA	-9	True	AGTAAA	-21	NA	137305964	137293973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_142520_91	chr5	-	2993	20	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	241.049367939295	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTGCTGTATGTCC	8278	False	NA	-9	True	AGTAAA	-21	NA	137305915	137293973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301301_137305307_137305448_137305685
Isoform_14253_7	chr11	-	5185	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-99	98	-99	-98	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATCTGTGTGGCCTCTTT	NA	False	NA	-27	True	CATAAA	-17	NA	70895362	70875014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
Isoform_142530_157	chr5	-	1742	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	176	250	-21	-250	multi-exon	FALSE	canonical	3	95	junction_6	14.9248115565993	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTCCAAGTCTGTT	1703	False	NA	-7	True	NA	NA	NA	137312490	137308165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
Isoform_142531_5	chr5	-	1981	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	-63	250	-63	-250	multi-exon	FALSE	canonical	3	95	junction_6	14.9248115565993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTCCAAGTCTGTT	1464	False	NA	-7	True	NA	NA	NA	137312729	137308165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
Isoform_142533_101	chr5	-	3299	14	FSM	ENSMUSG00000037344.15	ENSMUST00000039991.14	3330	14	31	0	31	0	multi-exon	FALSE	canonical	3	21	junction_3	4.75307437100782	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGTGGAGCACTGCT	6532	False	NA	0	True	AATAAA	-15	NA	137331828	137312819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137331709
Isoform_142534_285	chr5	-	788	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	93	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1732	False	NA	-33	True	AATAAA	-19	NA	137500687	137499700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137500342_137500540
Isoform_142535_23	chr5	-	850	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	31	0	31	0	multi-exon	FALSE	canonical	3	320	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1670	False	NA	-33	True	AATAAA	-19	NA	137500749	137499700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137500342_137500540
Isoform_14254_3	chr11	-	5268	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-92	8	-92	-8	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATAAGTCTTGGTATCC	NA	False	NA	-6	True	ATTAAA	-22	NA	70895355	70874924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
Isoform_142547_1639	chr5	-	1654	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	204	2	-5	-1	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	1639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTCTCCTTGCTTAC	1736	False	NA	-7	True	CATAAA	-20	NA	137531568	137526390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
Isoform_14255_3	chr11	-	5293	12	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-26	-18	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	32.8673768775349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCATTCATTCGATAAGT	NA	False	NA	-16	True	ATTAAA	-12	NA	70895289	70874934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886612_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
Isoform_142553_32	chr5	-	1067	7	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	2697	-2	-487	-1	3prime_fragment	FALSE	canonical	3	52	junction_6	194.602729226037	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCGTGTCTGAGGTTC	6831	False	NA	-5	True	AATAAA	-18	NA	137606941	137603367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606878
Isoform_142554_10	chr5	-	1149	7	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	2612	1	-572	-1	3prime_fragment	FALSE	canonical	3	52	junction_6	194.602729226037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGATCGTGTCTGAGG	6746	False	NA	-8	True	AATAAA	-15	NA	137607026	137603370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606878
Isoform_142559_432	chr5	-	1512	8	ISM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	842	3	57	-1	3prime_fragment	FALSE	canonical	3	423	junction_6	64.4265124789793	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCGTGTCTGAGGTTC	4865	False	NA	-5	True	AATAAA	-18	NA	137608907	137603367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658
Isoform_14256_5	chr11	-	5059	11	NIC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	1	-12	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	33.85793850783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCGATAAGTCTTGGT	NA	False	NA	-10	True	ATTAAA	-18	NA	70895262	70874928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
Isoform_142561_181	chr5	-	1531	9	FSM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	92	3	13	-1	multi-exon	FALSE	canonical	3	231	junction_8	116.165560731225	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCGTGTCTGAGGTTC	4115	False	NA	-5	True	AATAAA	-18	NA	137609657	137603367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498
Isoform_142562_145	chr5	-	1557	9	FSM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	66	3	-13	-1	multi-exon	FALSE	canonical	3	231	junction_8	116.165560731225	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCGTGTCTGAGGTTC	4089	False	NA	-5	True	AATAAA	-18	NA	137609683	137603367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498
Isoform_14257_5	chr11	-	1969	11	ISM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-21	4875	-21	-2215	5prime_fragment	FALSE	canonical	3	85	junction_6	13.6400146627487	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAGAATATAAAA	NA	False	NA	NA	False	AAAACA	-23	NA	70895284	70879791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
Isoform_142570_4	chr5	-	2898	13	NIC	ENSMUSG00000029722.16	novel	2858	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	52.4008985291919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1789	False	NA	NA	False	NA	NA	NA	137682963	137648724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659752_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
Isoform_142571_66	chr5	-	2881	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	-20	-3	-7	3	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1790	False	NA	NA	False	NA	NA	NA	137682962	137648743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
Isoform_142572_16	chr5	-	2410	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	-44	492	2	-118	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACACCGCTGGCCATTC	1766	False	NA	NA	False	NA	NA	NA	137682986	137649238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
Isoform_142573_7	chr5	-	2867	12	NIC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	39.6263540321879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1768	False	NA	NA	False	NA	NA	NA	137682984	137648743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659752_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
Isoform_142575_91	chr5	-	2852	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	21	20	-12	2	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1785	False	NA	NA	False	NA	NA	NA	137682967	137648744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
Isoform_142578_5	chr5	-	2739	11	NIC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	44.2361842839095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1789	False	NA	NA	False	NA	NA	NA	137682963	137648724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
Isoform_142579_3	chr5	-	2084	5	FSM	ENSMUSG00000029722.16	ENSMUST00000138604.2	1497	5	2	-589	2	589	multi-exon	FALSE	canonical	3	124	junction_3	10.3289641300568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GATTTAAAAAAAACAAAAAA	1799	False	NA	NA	False	NA	NA	NA	137682953	137660482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
Isoform_142581_46	chr5	-	3512	7	NIC	ENSMUSG00000045348.17	novel	3912	7	NA	NA	-77	31	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	6.97017455544216	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTCTTCTTATATCCC	8546	False	NA	-1	True	ATTAAA	-16	NA	137739441	137729143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137737912_137738065_137739312
Isoform_142583_3	chr5	-	3448	7	NNC	ENSMUSG00000045348.17	novel	3912	7	NA	NA	-205	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.6141675934562	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTCTTCTTATATCC	7913	False	NA	-2	True	ATTAAA	-15	NA	137740074	137729144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137737912_137738065_137740008
Isoform_142584_5	chr5	-	3919	3	ISM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	318	3	318	-3	intron_retention	FALSE	canonical	3	137	junction_2	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTGTCCAGCACTTT	3044	False	NA	-9	True	AATAAA	-26	NA	137784607	137780170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_137780747_137780856_137780984_137781391
Isoform_142585_249	chr5	-	2656	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	472	0	472	0	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCAGCACTTTCTA	3198	False	NA	-6	True	AATAAA	-29	NA	137784453	137780167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
Isoform_142588_40	chr5	-	2859	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	269	0	269	0	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCAGCACTTTCTA	2995	False	NA	-6	True	AATAAA	-29	NA	137784656	137780167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
Isoform_142589_29	chr5	-	3154	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	-29	3	-1	-3	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTGTCCAGCACTTT	2697	False	NA	-9	True	AATAAA	-26	NA	137784954	137780170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
Isoform_142595_4	chr5	-	1039	4	FSM	ENSMUSG00000029726.17	ENSMUST00000132726.2	524	4	5	-520	5	-3	multi-exon	FALSE	canonical	3	16	junction_3	65.2703778311588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTGTCCAGCACTTT	2679	False	NA	-9	True	AATAAA	-26	NA	137784972	137780170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137784855
Isoform_142598_4	chr5	-	4580	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	25	1865	-15	-1865	multi-exon	TRUE	canonical	3	14	junction_2	1.4790199457749	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	1736	False	NA	NA	False	NA	NA	NA	138153981	138139828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
Isoform_14261_7	chr11	-	1174	7	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	8	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	209.920619917784	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGCTTTCGTGTGAT	NA	False	NA	-3	True	AATAAA	-26	NA	70910087	70900752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909934
Isoform_14263_262	chr11	-	3611	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	53	2	-7	-2	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTATCTTGTATTTTT	NA	False	NA	-5	True	NA	NA	NA	70910076	70898269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
Isoform_142631_7997	chr5	-	2400	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	560	2	-44	-2	multi-exon	FALSE	canonical	3	1644	junction_12	192.903605514278	7997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTAGAGTTTTTAGTA	2276	False	NA	-10	True	AATAAA	-30	NA	138170124	138162846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
Isoform_142634_118	chr5	-	2428	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	529	5	-75	-5	multi-exon	FALSE	canonical	3	1644	junction_12	192.903605514278	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTCTGTAGAGTTTTTA	2245	False	NA	-13	True	AATAAA	-27	NA	138170155	138162849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
Isoform_14264_301	chr11	-	1130	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	53	2483	-7	8	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGCTTTCGTGTGATCT	NA	False	NA	-1	True	AATAAA	-28	NA	70910076	70900750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
Isoform_142651_100	chr5	-	2501	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	176.391146985028	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1963	False	NA	-4	True	AATAAA	-18	NA	138185477	138176878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185223
Isoform_142652_433	chr5	-	2379	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_14	144.727259325383	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1963	False	NA	-4	True	AATAAA	-18	NA	138185477	138176878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
Isoform_142654_956	chr5	-	2291	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	11	2	0	1	multi-exon	FALSE	canonical	3	362	junction_14	100.146932869985	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGCCTCCCGCATCA	1963	False	NA	-6	True	AATAAA	-16	NA	138185477	138176880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
Isoform_142657_168	chr5	-	2399	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_14	167.30713843536	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGCCTCCCGCATCAC	1963	False	NA	-5	True	AATAAA	-17	NA	138185477	138176879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
Isoform_142665_32	chr5	-	2808	10	FSM	ENSMUSG00000036948.18	ENSMUST00000159649.8	2093	10	-716	1	-23	0	multi-exon	FALSE	canonical	3	30	junction_4	5.95248677154617	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGAGTTTGTCTGTGTGT	9193	False	NA	-3	True	ATTAAA	-17	NA	138262318	138257920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328
Isoform_142667_223	chr5	-	2530	11	FSM	ENSMUSG00000036948.18	ENSMUST00000048421.14	2490	11	-43	3	-4	0	multi-exon	FALSE	canonical	3	23	junction_10	7.05761999543756	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGAGTTTGTCTGTGTGT	9212	False	NA	-3	True	ATTAAA	-17	NA	138262299	138257920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
Isoform_142668_5	chr5	-	2664	11	FSM	ENSMUSG00000036948.18	ENSMUST00000048421.14	2490	11	-60	-114	-21	114	multi-exon	FALSE	canonical	3	23	junction_10	7.05761999543756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCCAGTTGTCA	9195	False	NA	NA	False	NA	NA	NA	138262316	138257803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
Isoform_142669_4	chr5	-	2599	12	NNC	ENSMUSG00000036948.18	novel	2490	11	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.1423002281142	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTATGAGTTTGTCTGTG	9212	False	NA	-6	True	ATTAAA	-14	NA	138262299	138257923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_138258657_138258775_138258970_138259096_138259252_138259636_138259709_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
Isoform_142670_5	chr5	-	2904	9	NIC	ENSMUSG00000036948.18	novel	2093	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_3	5.91475908216049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGAGTTTGTCTGTGTGT	9216	False	NA	-3	True	ATTAAA	-17	NA	138262295	138257920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328
Isoform_142671_4	chr5	-	2652	10	NIC	ENSMUSG00000036948.18	novel	2490	11	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	23	junction_9	6.98322504998696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTATGAGTTTGTCTGTG	9206	False	NA	-6	True	ATTAAA	-14	NA	138262305	138257923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
Isoform_142672_5	chr5	-	2517	10	NIC	ENSMUSG00000029510.16	novel	2586	10	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	7.64166616179973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGGCTCTCTGTGTGT	1704	False	NA	-3	True	AATAAA	-17	NA	138278284	138271919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276717_138277100_138277260_138277910
Isoform_142673_42	chr5	-	2578	10	FSM	ENSMUSG00000029510.16	ENSMUST00000161827.8	2586	10	6	2	6	0	multi-exon	FALSE	canonical	3	16	junction_6	3.67507453523138	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1727	False	NA	-2	True	AATAAA	-18	NA	138278261	138271918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
Isoform_142675_17	chr5	-	2257	6	FSM	ENSMUSG00000058291.15	ENSMUST00000063262.11	2254	6	4	-7	2	3	multi-exon	FALSE	canonical	3	19	junction_4	25.9584283037321	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTTGTTTGTTTATCA	1756	False	NA	-2	True	AATAAA	-17	NA	138617998	138604374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614822_138615316_138615430_138617870
Isoform_142676_12	chr5	-	3745	6	FSM	ENSMUSG00000058291.15	ENSMUST00000063262.11	2254	6	4	-1495	2	359	multi-exon	FALSE	canonical	3	19	junction_4	25.9584283037321	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTATTTTAAGTTGT	1756	False	NA	NA	False	AATAAA	-8	NA	138617998	138602886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614822_138615316_138615430_138617870
Isoform_142677_55	chr5	-	2244	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	44	2461	21	3	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTTGTTTGTTTATCA	1775	False	NA	-2	True	AATAAA	-17	NA	138617979	138604374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
Isoform_142678_30	chr5	-	3757	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	25	967	2	365	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAGTTGTATTCAG	1756	False	NA	NA	False	AATAAA	-14	NA	138617998	138602880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
Isoform_142680_9	chr5	-	3682	5	FSM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	4	-368	4	368	multi-exon	FALSE	canonical	3	23	junction_3	27.3530162870569	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTGTATTCAGCAG	1738	False	NA	NA	False	AATAAA	-17	NA	138618016	138602877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
Isoform_142684_145	chr5	-	1005	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	93	962	9	-5	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138980699	138962730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
Isoform_142693_74	chr5	-	2281	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	-595	374	369	128	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTATTTCTGATGCGCC	NA	False	NA	-13	True	AATAAA	-18	NA	138981387	138962142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
Isoform_142697_36	chr5	-	2663	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	-595	-8	369	8	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATCCCGTGGTTCTGTTT	NA	False	NA	-11	True	ACTAAA	-40	NA	138981387	138961760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
Isoform_142707_54	chr5	-	1270	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	-17	34	-17	-5	multi-exon	FALSE	canonical	3	66	junction_6	122.688969892706	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138981859	138962730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
Isoform_142709_18	chr5	-	2220	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	-18	-915	-18	-13	multi-exon	FALSE	canonical	3	66	junction_6	122.688969892706	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTTCATGCACACTGG	NA	False	NA	-32	True	ACTAAA	-19	NA	138981860	138961781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
Isoform_14271_8	chr11	-	1650	7	NNC	ENSMUSG00000040554.11	novel	2309	6	NA	NA	-4789	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	1.63299316185545	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATTTATTTGATTT	NA	False	NA	NA	False	AATAAA	-11	NA	71933124	71919548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_71920283_71921032_71921175_71921251_71921429_71922242_71922432_71927437_71927618_71928188_71928286_71932993
Isoform_142710_34	chr5	-	1863	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	-17	-559	-17	133	multi-exon	FALSE	canonical	3	66	junction_6	122.688969892706	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGATGCGCCTCTGC	NA	False	NA	-8	True	AATAAA	-23	NA	138981859	138962137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
Isoform_142712_11	chr5	-	1138	6	NIC	ENSMUSG00000025856.16	novel	1287	7	NA	NA	-15	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	151.854667363239	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138981857	138962730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138981488
Isoform_14272_5	chr11	-	6596	20	FSM	ENSMUSG00000040543.17	ENSMUST00000075258.13	6555	20	-42	1	-42	-1	multi-exon	TRUE	canonical	1	2	junction_1	2.67542421623975	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCGCTCTGTTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	72026646	71938354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_71942187_71942666_71942796_71946955_71947140_71948845_71948996_71949211_71949361_71949663_71949781_71952299_71952417_71953920_71954070_71954888_71955084_71956291_71956463_71957931_71958105_71961128_71961314_71961713_71961837_71962224_71962415_71965244_71965481_71965784_71965862_71983353_71983402_72003082_72003191_72010912_72011009_72026479
Isoform_142721_7	chr5	-	2595	11	FSM	ENSMUSG00000025855.14	ENSMUST00000026973.14	2637	11	24	18	24	-7	multi-exon	FALSE	canonical	1	2	junction_7	3.06757233003559	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAACCCTTTCCCAACC	NA	False	NA	-20	True	ATTAAA	-8	NA	139115490	139003078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139004587_139005810_139005893_139022788_139022911_139028189_139028251_139036412_139036572_139048308_139048356_139049010_139049073_139092375_139092468_139094238_139094410_139113341_139113541_139115398
Isoform_142724_218	chr5	-	2511	11	FSM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	46	0	46	0	multi-exon	FALSE	canonical	3	178	junction_10	23.6296424010183	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	5004	False	NA	-5	True	AATAAA	-20	NA	139311331	139257630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
Isoform_142727_24	chr5	-	2670	11	FSM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	-113	0	-113	0	multi-exon	FALSE	canonical	3	178	junction_10	23.6296424010183	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	4845	False	NA	-5	True	AATAAA	-20	NA	139311490	139257630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
Isoform_142728_42	chr5	-	2556	11	FSM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	1	0	1	0	multi-exon	FALSE	canonical	3	178	junction_10	23.6296424010183	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	4959	False	NA	-5	True	AATAAA	-20	NA	139311376	139257630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
Isoform_142732_4	chr5	-	2459	10	NIC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_9	64.29407744934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	4925	False	NA	-5	True	AATAAA	-20	NA	139311410	139257630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139311035
Isoform_142733_22	chr5	-	2742	10	NIC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	73	0	intron_retention	FALSE	canonical	3	178	junction_9	23.5843639350783	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	5031	False	NA	-5	True	AATAAA	-20	NA	139311304	139257630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
Isoform_142737_33	chr5	-	1002	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	62	1397	-6	236	multi-exon	FALSE	canonical	3	183	junction_2	1.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTTA	NA	False	NA	-3	True	TTTAAA	-23	NA	139330926	139323340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139324131_139328317_139328430_139330826
Isoform_142738_114	chr5	-	773	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	55	1633	-1	0	multi-exon	FALSE	canonical	3	183	junction_2	1.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTGGCTTTTGAC	NA	False	NA	-18	True	AATACA	-14	NA	139330933	139323576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139324131_139328317_139328430_139330826
Isoform_14274_9	chr11	-	4420	19	FSM	ENSMUSG00000020807.16	ENSMUST00000238653.2	4390	19	-32	2	-4	-2	multi-exon	FALSE	canonical	3	10	junction_18	5.57025832235613	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTATTTGAAGTAA	NA	False	NA	-2	True	AATAAA	-20	NA	72098289	72044924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72098021
Isoform_142742_644	chr5	-	1452	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	-31	8	-6	-8	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTATTCCTGACTTTT	NA	False	NA	-14	True	NA	NA	NA	139446288	139345501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
Isoform_142748_23	chr5	-	2013	4	FSM	ENSMUSG00000053553.12	ENSMUST00000198474.2	2030	4	14	3	-2	-3	multi-exon	FALSE	canonical	3	675	junction_3	29.698484809835	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCCTGACTTTTTGCCT	NA	False	NA	-9	True	NA	NA	NA	139446268	139345496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139347144_139349727_139349919_139441171_139441302_139446223
Isoform_14275_4	chr11	-	4384	19	NNC	ENSMUSG00000020807.16	novel	4390	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	6.14159065735165	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72098255	72044922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093377_72098021
Isoform_142752_116	chr5	-	3095	7	FSM	ENSMUSG00000053581.14	ENSMUST00000079996.13	3169	7	67	7	-18	-2	multi-exon	FALSE	canonical	3	27	junction_6	14.7271480229163	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTATTCTAGACAGT	8744	False	NA	-13	True	AATAAA	-17	NA	139470237	139456972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470020
Isoform_142753_70	chr5	-	3056	7	FSM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	65	0	12	0	multi-exon	FALSE	canonical	3	34	junction_6	12.5532200384337	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTCTAGACAGTTT	8774	False	NA	-11	True	AATAAA	-19	NA	139470207	139456970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470031
Isoform_142755_5	chr5	-	1991	3	ISM	ENSMUSG00000053581.14	ENSMUST00000143889.2	433	4	-36	1288	0	-1288	5prime_fragment	FALSE	canonical	3	27	junction_2	20	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8762	False	NA	NA	False	NA	NA	NA	139470219	139466119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_139467816_139468456_139468553_139470020
Isoform_142756_4	chr5	-	1969	3	ISM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	64	9149	11	-1288	5prime_fragment	FALSE	canonical	3	34	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8773	False	NA	NA	False	NA	NA	NA	139470208	139466119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_139467816_139468456_139468553_139470031
Isoform_142757_30	chr5	-	3304	18	NNC	ENSMUSG00000036718.18	novel	3346	17	NA	NA	10	1	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_8	5.0540332997672	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGCCTGTGTGTGTCA	NA	False	NA	-3	True	AATAAA	-16	NA	139722081	139692449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_139692665_139692816_139692864_139694640_139694756_139695270_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139698136_139698895_139699153_139701460_139701805_139701837_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139721772
Isoform_14276_110	chr11	-	615	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	550	-4	11	4	multi-exon	FALSE	canonical	3	203	junction_2	14.0079342596338	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTCCACTTTGATTTC	NA	False	NA	-1	True	AATAAA	-19	NA	72105868	72102545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
Isoform_14277_4	chr11	-	1185	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	-20	-4	-20	4	multi-exon	FALSE	canonical	3	203	junction_2	14.0079342596338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTCCACTTTGATTTC	NA	False	NA	-1	True	AATAAA	-19	NA	72106438	72102545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
Isoform_142779_45	chr5	-	7089	47	FSM	ENSMUSG00000029547.11	ENSMUST00000072607.9	7102	47	13	0	13	0	multi-exon	TRUE	canonical	0	0	junction_11	49.3038493955329	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139761415	139737036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
Isoform_142780_14	chr5	-	7161	47	FSM	ENSMUSG00000029547.11	ENSMUST00000072607.9	7102	47	-62	3	-61	0	multi-exon	FALSE	canonical	0	0	junction_11	49.3038493955329	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761490	139737039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
Isoform_142781_4	chr5	-	6953	48	NIC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	53.7207540951566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139761469	139737036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086_139761186_139761375
Isoform_142782_24	chr5	-	7093	47	FSM	ENSMUSG00000029547.11	ENSMUST00000200393.5	7070	47	-22	-1	13	1	multi-exon	FALSE	non_canonical	0	0	junction_11	54.456278746312	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGGTGTCCTGTGTT	NA	False	NA	-11	True	AATGAA	-17	NA	139761415	139737038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
Isoform_142783_6	chr5	-	7158	47	FSM	ENSMUSG00000029547.11	ENSMUST00000200393.5	7070	47	-85	-3	-49	0	multi-exon	FALSE	non_canonical	0	0	junction_11	54.456278746312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139761478	139737036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
Isoform_142784_4	chr5	-	6946	48	NIC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	-30	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_11	58.2642083266648	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761459	139737039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086_139761186_139761375
Isoform_142794_19	chr5	-	7099	47	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_11	51.7986002759554	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761416	139737039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
Isoform_142796_6	chr5	-	7167	47	NNC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	-49	0	intron_retention	FALSE	non_canonical	0	0	junction_11	56.6553270836602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761478	139737039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
Isoform_142798_253	chr5	-	856	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	27	0	-15	0	multi-exon	FALSE	canonical	3	166	junction_2	27	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGACATCATGGGCAT	7340	False	NA	-12	True	AATAAA	-31	NA	139812613	139809346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139809829_139811882_139812120_139812476
Isoform_142799_100	chr5	-	743	3	FSM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	-15	5	-15	-5	multi-exon	FALSE	canonical	3	69	junction_2	75.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACTTGGCTGGCCTTCT	7340	False	NA	-38	True	AATAAA	-5	NA	139812613	139809372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139809829_139811882_139812120_139812563
Isoform_142805_283	chr5	-	2630	18	FSM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	7	3	5	2	multi-exon	FALSE	canonical	3	167	junction_17	17.902078903461	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTGTCCAAGGCTCCA	NA	False	NA	-2	True	AATAAA	-24	NA	140307300	139994446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
Isoform_142806_123	chr5	-	2647	18	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_17	43.2672550934514	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGGATTGTGTCCAAGG	NA	False	NA	-7	True	AATAAA	-19	NA	140307325	139994451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300905_140307261
Isoform_142808_32	chr5	-	2515	17	NIC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_6	48.426329357076	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGTCCAAGGCTCCAA	NA	False	NA	-1	True	AATAAA	-25	NA	140307325	139994445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
Isoform_142809_10	chr5	-	2489	17	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	61.8553946212454	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTGTGTCCAAGGCTCC	NA	False	NA	-3	True	AATAAA	-23	NA	140307304	139994447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300905_140307261
Isoform_142812_10	chr5	-	3060	9	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	-25	285108	-25	-126814	5prime_fragment	FALSE	canonical	3	167	junction_8	18.9864260723286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140307332	140279551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
Isoform_142815_193	chr5	-	1408	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	19	16	19	-16	multi-exon	FALSE	canonical	3	45	junction_2	12	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATTTTTCTGGCTTTT	3920	False	NA	-21	True	AAAACA	-21	NA	140317634	140313444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140314536_140316734_140317025_140317607
Isoform_142816_4	chr5	-	1744	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	-316	15	-316	-15	multi-exon	FALSE	canonical	3	45	junction_2	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTTTCTGGCTTTTG	3585	False	NA	-20	True	AAAACA	-22	NA	140317969	140313443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140314536_140316734_140317025_140317607
Isoform_142819_565	chr5	-	2601	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	28	-2	7	0	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	7748	False	NA	-10	True	AATAAA	-16	NA	140374989	140326055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
Isoform_14282_141	chr11	-	3295	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	29	5	-17	-5	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGTGCCTGGCCTT	NA	False	NA	-5	True	AATAAA	-18	NA	72157456	72132819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
Isoform_142820_60	chr5	-	2628	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	1	-2	1	0	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	7721	False	NA	-10	True	AATAAA	-16	NA	140375016	140326055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
Isoform_142824_149	chr5	-	4662	14	FSM	ENSMUSG00000036565.8	ENSMUST00000042661.8	4658	14	-8	4	-8	-4	multi-exon	FALSE	canonical	3	60	junction_1	9.95255014746823	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTCTCTCTCTCTCTC	1268	False	NA	NA	False	AATAAA	-12	NA	140634794	140606336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
Isoform_142827_3	chr5	-	4955	15	NNC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	1	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	27.4710422675461	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTCTCTCTCTCTCTC	1277	False	NA	NA	False	AATAAA	-12	NA	140634785	140606336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140624041_140624344_140634459
Isoform_142828_4	chr5	-	4375	24	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.69652169565652	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTTTGGCAGGTG	4479	False	NA	NA	False	AGTAAA	-18	NA	140688065	140649259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_140651249_140651762_140651964_140654776_140654861_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_14283_41	chr11	-	3317	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	6	6	6	-6	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTGGGTGCCTGGCCT	NA	False	NA	-6	True	AATAAA	-17	NA	72157479	72132820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
Isoform_142830_9	chr5	-	4366	24	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	8.47948709081224	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCCTTTGGCAGGT	4502	False	NA	NA	False	AGTAAA	-17	NA	140688042	140649260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_140651249_140651762_140651964_140654776_140654876_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_142832_14	chr5	-	4322	23	FSM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	36	1679	-3	-1	multi-exon	FALSE	canonical	3	8	junction_2	7.69995170103989	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCCTTTGGCAGGT	4447	False	NA	NA	False	AGTAAA	-17	NA	140688097	140649260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_142835_7	chr5	-	2464	21	ISM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	73	8272	-5	-3941	5prime_fragment	FALSE	canonical	3	15	junction_8	7.13161973187017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGATCTAGCTTATTGA	4484	False	NA	NA	False	ATTAAA	-14	NA	140688060	140655853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_142841_437	chr5	-	3415	4	FSM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	-6	7	-6	-7	multi-exon	FALSE	canonical	3	201	junction_1	26.9938264547038	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTCTGCTTCATGC	NA	False	NA	NA	False	AATAAA	-20	NA	140816192	140744169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140746874_140748344_140748396_140771151_140771368_140815748
Isoform_142842_172	chr5	-	3437	4	FSM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	-29	8	-29	-8	multi-exon	FALSE	canonical	3	201	junction_1	26.9938264547038	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGTCTGCTTCATG	NA	False	NA	NA	False	AATAAA	-19	NA	140816215	140744170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140746874_140748344_140748396_140771151_140771368_140815748
Isoform_142844_15	chr5	-	1302	6	FSM	ENSMUSG00000036526.9	ENSMUST00000196169.2	1299	6	6	-9	6	7	multi-exon	FALSE	canonical	2	4	junction_5	3.77359245282264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCCACAGTCTCACTAG	NA	False	NA	NA	False	ATTAAA	-30	NA	140867954	140858737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140859285_140860095_140860212_140862151_140862277_140863717_140863898_140866052_140866189_140867756
Isoform_142845_5	chr5	-	1385	6	FSM	ENSMUSG00000036526.9	ENSMUST00000196169.2	1299	6	-89	3	-89	-3	multi-exon	FALSE	canonical	2	4	junction_5	3.77359245282264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGAGGTTCTTATCCCA	NA	False	NA	NA	False	ATTAAA	-18	NA	140868049	140858749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_140859285_140860095_140860212_140862151_140862277_140863717_140863898_140866052_140866189_140867756
Isoform_142847_5	chr5	-	3657	15	NIC	ENSMUSG00000029576.18	novel	3700	15	NA	NA	-40	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	13.9532747966569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGGGGATGTAGGATC	NA	False	NA	-9	True	AATAAA	-17	NA	142536760	142470597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536680
Isoform_142849_83	chr5	-	3650	15	FSM	ENSMUSG00000029576.18	ENSMUST00000063635.15	3700	15	44	6	8	-3	multi-exon	FALSE	canonical	3	29	junction_12	8.41069532906569	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATAGTGGGGATGTAGGA	NA	False	NA	-11	True	AATAAA	-15	NA	142536809	142470599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
Isoform_14285_3	chr11	-	3533	13	NIC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	13.363247692417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGGTGCCTGGCCTTC	NA	False	NA	-4	True	AATAAA	-19	NA	72158054	72132818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289_72157411_72157771
Isoform_142850_3	chr5	-	1167	2	ISM	ENSMUSG00000029576.18	ENSMUST00000110785.2	3708	15	21	58035	6	704	5prime_fragment	FALSE	canonical	3	45	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	142536811	142528668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_142529759_142536734
Isoform_142851_3	chr5	-	2201	7	FSM	ENSMUSG00000039533.9	ENSMUST00000037048.9	3317	7	0	1116	0	-1116	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGAGCTTTAAGATTG	NA	False	NA	9	True	ATTAAA	-31	NA	142594555	142549228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142550697_142553619_142553690_142555220_142555323_142560551_142560627_142560940_142561102_142565935_142566018_142594312
Isoform_142853_5	chr5	-	1984	4	NNC	ENSMUSG00000039477.17	novel	9342	25	NA	NA	8209	50	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	12.0277457017791	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTATGTCTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	142714227	142710365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_142711943_142712732_142712808_142713595_142713833_142714132
Isoform_142857_3	chr5	-	6484	16	FSM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	0	3	0	-3	multi-exon	FALSE	canonical	3	19	junction_8	42.8710728684143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGTGCCTCGTTTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	142803417	142740546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
Isoform_14286_3	chr11	-	3155	11	NIC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	-17	-8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	16.135674761224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCCTGGGTGCCTGGC	NA	False	NA	-8	True	AATAAA	-15	NA	72157456	72132822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152848_72152978_72157289
Isoform_142863_3	chr5	-	5900	15	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-100	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	42.149696781537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGTGCCTCGTTTCT	8459	False	NA	NA	False	ATTAAA	-23	NA	142786292	142740546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142786057
Isoform_142865_24	chr5	-	6332	16	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-130	-6	combination_of_known_junctions	FALSE	canonical	3	90	junction_14	28.7986110776197	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAACTGTGTGCCTCGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	142803265	142740549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
Isoform_142866_21	chr5	-	6482	16	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	90	junction_14	28.7986110776197	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAACTGTGTGCCTCGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	142803415	142740549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
Isoform_142868_3	chr5	-	6216	15	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-140	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	43.7225132313469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGTGCCTCGTTTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	142803275	142740546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
Isoform_142869_178	chr5	-	2787	5	FSM	ENSMUSG00000066640.12	ENSMUST00000035985.8	2831	5	26	18	26	-18	multi-exon	FALSE	canonical	3	17	junction_3	6.28490254498827	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTTAACCCAT	NA	False	NA	-20	True	NA	NA	NA	142880967	142857561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142858276_142864412_142864632_142871293_142872838_142874423_142874631_142880864
Isoform_14287_17	chr11	-	1145	6	ISM	ENSMUSG00000020799.17	ENSMUST00000108502.8	1403	8	3606	4	3606	3	3prime_fragment	FALSE	canonical	3	33	junction_5	9.09065454189081	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGTTAGCACAGAGCT	NA	False	NA	-5	True	ATTAAA	-13	NA	72248516	72235551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72248310
Isoform_142871_5	chr5	-	4388	4	NIC	ENSMUSG00000066640.12	novel	7857	5	NA	NA	30	1	intron_retention	FALSE	canonical	3	21	junction_1	5.55777733351102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCTCCAGGATGTTT	NA	False	NA	-1	True	NA	NA	NA	142880963	142857542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_142858276_142864412_142864632_142871293_142874631_142880864
Isoform_142872_3	chr5	-	3195	5	NNC	ENSMUSG00000066640.12	novel	7857	5	NA	NA	28	-1	intron_retention	FALSE	canonical	0	0	junction_3	12.3768937944866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGATGTCTCCAGGATGT	NA	False	NA	-3	True	NA	NA	NA	142880965	142857544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_142858276_142864412_142864632_142871293_142873231_142874423_142874631_142880864
Isoform_142885_159	chr5	-	1902	5	ISM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	973	4	40	-4	3prime_fragment	FALSE	canonical	3	4052	junction_3	83.3351666465004	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTTGTGGCTCTGTGG	9862	False	NA	-5	True	AATAAA	-23	NA	142891536	142888873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318
Isoform_14289_21	chr11	-	1386	8	FSM	ENSMUSG00000020799.17	ENSMUST00000108503.9	1397	8	10	1	10	-1	multi-exon	FALSE	canonical	3	12	junction_6	18.5681315754731	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGCACAGAGCTCTC	NA	False	NA	-2	True	ATTAAA	-16	NA	72252689	72235548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72248310_72248477_72250504_72250712_72252618
Isoform_142895_8461	chr5	-	1887	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	29	4	0	-4	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	8461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTTGTGGCTCTGTGG	8918	False	NA	-5	True	AATAAA	-23	NA	142892480	142888873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
Isoform_14290_35	chr11	-	988	6	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4502	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.6320270880016	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGCACAGAGCTCTC	NA	False	NA	-2	True	ATTAAA	-16	NA	72247620	72235548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72247574
Isoform_14291_5	chr11	-	984	5	NIC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	3626	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	17.4696164811939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGCACAGAGCTCTC	NA	False	NA	-2	True	ATTAAA	-16	NA	72248496	72235548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_72235798_72236411_72236609_72242653_72242877_72246035_72246165_72248310
Isoform_142918_43	chr5	-	4460	17	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_16	44.6192223150516	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGCTCTGTTTGTCC	6138	False	NA	-2	True	AATAAA	-15	NA	143098741	142976648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084256_143098653
Isoform_14292_4	chr11	-	844	5	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4502	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	17.8518206354422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGCACAGAGCTCTC	NA	False	NA	-2	True	ATTAAA	-16	NA	72247620	72235548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_72235798_72236411_72236609_72242653_72242877_72246035_72246165_72247574
Isoform_142921_166	chr5	-	4458	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	16	0	2	0	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6146	False	NA	-1	True	AATAAA	-16	NA	143098733	142976647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
Isoform_142924_33	chr5	-	4498	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	-24	0	-24	0	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6106	False	NA	-1	True	AATAAA	-16	NA	143098773	142976647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
Isoform_142929_41	chr5	-	4624	17	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_16	45.1403626896152	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6146	False	NA	-1	True	AATAAA	-16	NA	143098733	142976647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084256_143098653
Isoform_142931_150	chr5	-	4629	17	FSM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	2	-927	2	0	multi-exon	FALSE	canonical	3	116	junction_14	28.9242005075335	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6146	False	NA	-1	True	AATAAA	-16	NA	143098733	142976647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
Isoform_142933_42	chr5	-	4667	17	FSM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	-36	-927	-22	0	multi-exon	FALSE	canonical	3	116	junction_14	28.9242005075335	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6108	False	NA	-1	True	AATAAA	-16	NA	143098771	142976647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
Isoform_142943_10	chr5	-	511	3	FSM	ENSMUSG00000104529.5	ENSMUST00000198334.2	520	3	6	3	6	-3	multi-exon	FALSE	canonical	3	32	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGTGTCGCCTCCTA	3483	False	NA	-3	True	AATAAA	-16	NA	143151500	143150536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143150848_143151184_143151305_143151420
Isoform_142944_8	chr5	-	613	3	NNC	ENSMUSG00000104529.5	novel	520	3	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGTGTCGCCTCCTA	3460	False	NA	-3	True	AATAAA	-16	NA	143151523	143150536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_143150848_143151105_143151305_143151420
Isoform_142946_66	chr5	-	3379	5	FSM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	-48	4	-3	-3	multi-exon	FALSE	canonical	3	25	junction_4	6.20483682299543	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGCTGTTTATGTGTT	NA	False	NA	NA	False	TTTAAA	-14	NA	143166533	143157944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165298_143166303
Isoform_142947_5	chr5	-	3487	5	FSM	ENSMUSG00000061898.11	ENSMUST00000165318.4	3480	5	-11	4	-11	-3	multi-exon	FALSE	canonical	1	1	junction_4	15.5724115023974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGCTGTTTATGTGTT	NA	False	NA	NA	False	TTTAAA	-14	NA	143166541	143157944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165398_143166303
Isoform_142948_20	chr5	-	3362	5	NNC	ENSMUSG00000061898.11	novel	3480	5	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	14.3243673507768	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGCTGTTTATGTGTT	NA	False	NA	NA	False	TTTAAA	-14	NA	143166513	143157944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165301_143166303
Isoform_142949_5	chr5	-	6302	4	NIC	ENSMUSG00000061898.11	novel	3335	5	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	25	junction_3	5.43650214343336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTGTTTATGTGTTGT	NA	False	NA	NA	False	GATAAA	-1	NA	143166560	143157942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_143160814_143161790_143161887_143162219_143165298_143166303
Isoform_142950_7	chr5	-	4847	7	FSM	ENSMUSG00000046658.17	ENSMUST00000161448.8	6891	7	14	2030	14	-1438	multi-exon	TRUE	canonical	0	0	junction_2	2.98607881119482	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCTTGGGGACTGGA	NA	False	NA	NA	False	AATAAA	-8	NA	143255763	143237481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143241321_143248547_143248662_143249050_143249178_143249805_143249898_143250047_143250437_143250760_143250889_143255605
Isoform_142951_614	chr5	-	2186	6	FSM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	20	2	0	0	multi-exon	FALSE	canonical	3	130	junction_3	6.98569967862919	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGGCATTGTGGGGTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	143301095	143286963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300657
Isoform_142955_60	chr5	-	2235	6	NNC	ENSMUSG00000039244.11	novel	2208	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	52.428999608995	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGGCATTGTGGGGTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	143301095	143286963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300608
Isoform_142956_11	chr5	-	1340	8	FSM	ENSMUSG00000001844.11	ENSMUST00000159813.8	1341	8	0	1	0	-1	multi-exon	TRUE	canonical	3	40	junction_2	78.3753397284568	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTTTTCTCATCAT	5305	False	NA	-15	True	AATACA	-24	NA	143314975	143302245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143302588_143305985_143306231_143307509_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
Isoform_142959_4	chr5	-	1807	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	44	junction_7	76.9571839613776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATTTGTTTTCTCATC	5310	False	NA	-17	True	AATACA	-22	NA	143314970	143302247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314432
Isoform_142960_28	chr5	-	1540	9	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	94.7198995723707	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5313	False	NA	-13	True	AATACA	-26	NA	143314967	143302243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314432_143314653_143314920
Isoform_142961_13	chr5	-	1393	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	84.1580146425249	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5306	False	NA	-14	True	AATACA	-25	NA	143314974	143302244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314853
Isoform_142962_138	chr5	-	1345	8	FSM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	19	0	-8	0	multi-exon	FALSE	canonical	3	167	junction_7	40.248209492435	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5288	False	NA	-13	True	AATACA	-26	NA	143314992	143302243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
Isoform_142963_8	chr5	-	1411	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	1	5	junction_6	91.0541440180355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTCTCATCATTGT	5305	False	NA	-12	True	AATACA	-27	NA	143314975	143302242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143312061_143314145_143314326_143314920
Isoform_142964_3	chr5	-	1628	9	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	109.421133127929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATATTTGTTTTCTCA	5307	False	NA	-19	True	AATACA	-20	NA	143314973	143302249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310154_143310639_143310714_143311853_143311979_143314145_143314326_143314432_143314653_143314920
Isoform_142965_12	chr5	-	1431	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	86.0744812736656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTTTTCTCATCAT	5288	False	NA	-15	True	AATACA	-24	NA	143314992	143302245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310154_143310639_143310714_143311853_143311979_143314145_143314326_143314920
Isoform_142966_5	chr5	-	3108	6	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	22	junction_5	97.638107314716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTTTTCTCATCAT	5304	False	NA	-15	True	AATACA	-24	NA	143314976	143302245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143311979_143314145_143314326_143314853
Isoform_142967_5	chr5	-	3036	6	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	2	-3	intron_retention	FALSE	canonical	3	167	junction_5	47.1720256084048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATTTGTTTTCTCATC	5307	False	NA	-17	True	AATACA	-22	NA	143314973	143302247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143311979_143314145_143314326_143314920
Isoform_142972_1620	chr5	-	2271	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	41	1847	-2	1	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGTTATGCTTGTGTT	3464	False	NA	-8	True	AATAAA	-14	NA	143513750	143491235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
Isoform_142973_122	chr5	-	2293	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	18	1848	18	0	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGGTTATGCTTGTGT	3441	False	NA	-9	True	AATAAA	-13	NA	143513773	143491236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
Isoform_142988_90	chr5	-	5127	18	FSM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	17	7	17	-7	multi-exon	FALSE	canonical	3	67	junction_4	13.3323240679149	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAACAACCGTCTCAGT	NA	False	NA	NA	False	TATAAA	-9	NA	143718018	143696086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
Isoform_142990_13	chr5	-	5328	18	FSM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	-177	0	-177	0	multi-exon	FALSE	canonical	3	67	junction_4	13.3323240679149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTCTCAGTTTTACTC	NA	False	NA	NA	False	ATTAAA	-1	NA	143718212	143696079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
Isoform_142992_4	chr5	-	5324	18	FSM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	-223	50	-223	-50	multi-exon	FALSE	canonical	3	67	junction_4	13.3323240679149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACGGCATGTAAGATT	NA	False	NA	NA	False	ATTAAA	-21	NA	143718258	143696129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
Isoform_142999_627	chr5	-	1163	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	22	0	22	0	multi-exon	FALSE	canonical	3	560	junction_3	88.5023540176569	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846635	143839521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
Isoform_143002_176	chr5	-	1044	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	29	0	21	0	multi-exon	FALSE	canonical	3	207	junction_3	226.993881464286	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846636	143839521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
Isoform_143009_40	chr5	-	1824	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	-61	6	-37	-6	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGGTTTCCTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	143951732	143924732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
Isoform_143010_1008	chr5	-	1796	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	-34	7	-10	-7	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951705	143924733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
Isoform_14302_2504	chr11	-	2613	8	FSM	ENSMUSG00000045667.15	ENSMUST00000050226.7	2624	8	4	7	2	-7	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	2504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGATGACTTTGAGTGA	NA	False	NA	-8	True	GATAAA	-11	NA	72302535	72280946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
Isoform_143021_115	chr5	-	5061	25	FSM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	42	3	-15	-3	multi-exon	FALSE	canonical	3	63	junction_17	9.68236871271121	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGACTGACAAGATTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	144160391	144131262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
Isoform_143022_3	chr5	-	4887	24	NIC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	21	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	18.586842104911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGTGACTGACAAGATT	NA	False	NA	-12	True	AATAAA	-11	NA	144160403	144131265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144155331_144155567_144160312
Isoform_143023_3	chr5	-	2372	9	ISM	ENSMUSG00000066621.13	ENSMUST00000153103.8	4329	24	-30	14117	-19	7	5prime_fragment	FALSE	canonical	3	63	junction_2	8.07774721070176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCACCACCA	NA	False	NA	NA	False	NA	NA	NA	144160395	144146285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144154227_144155331_144155567_144160312
Isoform_143024_3	chr5	-	923	2	FSM	ENSMUSG00000066621.13	ENSMUST00000136018.2	493	2	-26	-404	22	404	multi-exon	FALSE	canonical	3	82	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144160402	144154733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144155567_144160312
Isoform_143026_38	chr5	-	2308	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	-2	941	-2	-941	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACCCAATTTTTACCTT	NA	False	NA	NA	False	ATTAAA	-10	NA	144294924	144202276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
Isoform_143029_5	chr5	-	2489	6	ISM	ENSMUSG00000043388.9	ENSMUST00000061446.8	2805	8	9017	2	9017	-2	3prime_fragment	FALSE	canonical	2	9	junction_3	3.3466401061363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGTGTGGCAAGAATA	NA	False	NA	-17	True	AATAAA	-15	NA	144689442	144672726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097
Isoform_143030_4	chr5	-	2827	7	ISM	ENSMUSG00000043388.9	ENSMUST00000061446.8	2805	8	5915	3	5915	-3	3prime_fragment	FALSE	canonical	2	6	junction_6	4.2687494916219	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGTGTGGCAAGAAT	NA	False	NA	-18	True	AATAAA	-14	NA	144692544	144672727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097_144689258_144692020
Isoform_143031_17	chr5	-	2764	8	FSM	ENSMUSG00000043388.9	ENSMUST00000061446.8	2805	8	41	0	41	0	multi-exon	TRUE	canonical	2	3	junction_7	5.20204041600946	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTGGCAAGAATATC	NA	False	NA	-15	True	AATAAA	-17	NA	144698418	144672724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097_144689258_144692020_144692327_144698266
Isoform_143032_82	chr5	-	2714	18	FSM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	18	-7	10	7	multi-exon	FALSE	canonical	3	98	junction_2	50.6104602342352	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTTGGCACGGTGGGA	NA	False	NA	-32	True	AATAAA	-23	NA	144902639	144815913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_143035_41	chr5	-	5330	18	FSM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	9	-2614	1	-2	multi-exon	TRUE	canonical	3	98	junction_2	50.6104602342352	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTCCTTCCTCTCTT	NA	False	NA	-9	True	AATAAA	-18	NA	144902648	144813306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_143038_6	chr5	-	2596	17	NIC	ENSMUSG00000038780.15	novel	2725	18	NA	NA	-11	7	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	74.3727678236463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTTGGCACGGTGGGA	NA	False	NA	-32	True	AATAAA	-23	NA	144902668	144815913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_143040_166	chr5	-	2732	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	9	2602	1	7	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTTGGCACGGTGGGA	NA	False	NA	-32	True	AATAAA	-23	NA	144902648	144815913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_143042_55	chr5	-	2767	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	-26	2602	-26	7	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTTGGCACGGTGGGA	NA	False	NA	-32	True	AATAAA	-23	NA	144902683	144815913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_143043_79	chr5	-	5339	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	9	-5	1	-2	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTCCTTCCTCTCTT	NA	False	NA	-9	True	AATAAA	-18	NA	144902648	144813306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_143046_23	chr5	-	5376	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	-26	-7	-26	0	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTTCCTCTCTTTC	NA	False	NA	-7	True	AATAAA	-20	NA	144902683	144813304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_143047_7	chr5	-	2586	17	NIC	ENSMUSG00000038780.15	novel	5420	19	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	67.2339374404772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTTGGCACGGTGGGA	NA	False	NA	-32	True	AATAAA	-23	NA	144902649	144815913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_14305_109	chr11	-	3572	8	FSM	ENSMUSG00000045667.15	ENSMUST00000108500.8	3572	8	2	-2	2	2	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGGTGGTACTCATTT	NA	False	NA	-4	True	ATTAAA	-17	NA	72302535	72279987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
Isoform_143051_12	chr5	-	1994	13	ISM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	5	5315	-3	166	5prime_fragment	FALSE	canonical	3	239	junction_1	24.1504255771106	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGACTTGTGTTCTTTT	NA	False	NA	NA	False	AATGAA	-20	NA	144902652	144821235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_143057_304	chr5	-	1271	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	196	886	-44	429	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTGTTTGGCAGTTTC	NA	False	NA	-23	True	ATTAAA	-14	NA	145076852	145066464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
Isoform_143059_51	chr5	-	1355	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	112	886	112	429	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTGTTTGGCAGTTTC	NA	False	NA	-23	True	ATTAAA	-14	NA	145076936	145066464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
Isoform_143072_177	chr5	-	3026	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	49	12	49	-12	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTTTAACTGAGTGC	NA	False	NA	-10	True	AATAAA	-18	NA	145103869	145084335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
Isoform_143073_6	chr5	-	7162	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	49	-4124	49	4124	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTTGGTCTGATGT	NA	False	NA	NA	False	NA	NA	NA	145103869	145080199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
Isoform_143078_2008	chr5	-	426	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	521	8	-13	0	multi-exon	FALSE	canonical	3	4948	junction_3	568.415341101909	2008	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTGCCTGGTGTAGT	8618	False	NA	-10	True	AATAAA	-17	NA	145128351	145120515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
Isoform_143083_40	chr5	-	1971	3	FSM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	-18	14	-18	-14	multi-exon	FALSE	canonical	3	18	junction_2	1	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTGTGATTGTTCAG	1573	False	NA	NA	False	NA	NA	NA	145138696	145131769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_145133010_145135486_145135611_145138089
Isoform_143091_10	chr5	-	3320	5	FSM	ENSMUSG00000029634.16	ENSMUST00000169407.9	3276	5	-44	0	1	0	multi-exon	FALSE	canonical	1	2	junction_4	52.1488254901297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTGTGTGCAAACTTA	2791	False	NA	NA	False	ATTAAA	-24	NA	146157755	146146005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157547
Isoform_143093_48	chr5	-	3126	5	FSM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	17	-755	-11	-6	multi-exon	FALSE	canonical	3	38	junction_4	36.6401419211225	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTAAAGACTGTGTGCA	2777	False	NA	NA	False	ATTAAA	-18	NA	146157769	146146011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157749
Isoform_143094_211	chr5	-	3322	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	120	10	-17	-6	multi-exon	FALSE	canonical	3	59	junction_4	27.6348964173923	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTAAAGACTGTGTGCA	2301	False	NA	NA	False	ATTAAA	-18	NA	146158245	146146011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
Isoform_143102_545	chr5	-	4147	9	FSM	ENSMUSG00000029640.18	ENSMUST00000085614.6	4327	9	166	14	166	-14	multi-exon	FALSE	canonical	3	222	junction_1	37.7638633484446	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGTTTTTAACTATAC	1288	False	NA	NA	False	NA	NA	NA	146731650	146671632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
Isoform_143107_24	chr5	-	4284	9	FSM	ENSMUSG00000029640.18	ENSMUST00000085614.6	4327	9	13	30	13	0	multi-exon	FALSE	canonical	3	222	junction_1	37.7638633484446	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTTATTTGTGCTTGT	1135	False	NA	NA	False	NA	NA	NA	146731803	146671648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
Isoform_143108_13	chr5	-	3914	8	NIC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	197	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	96.469726667309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATACTTTTTTTTCCTT	1319	False	NA	NA	False	NA	NA	NA	146731619	146671620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146705746_146705828_146731424
Isoform_143109_24	chr5	-	3917	8	NIC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	166	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	96.469726667309	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTTATTTGTGCTTGT	1288	False	NA	NA	False	NA	NA	NA	146731650	146671648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146705746_146705828_146731424
Isoform_143110_10	chr5	-	4266	10	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	173	9	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	113.432309722093	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTGTTGGTTTTTA	1295	False	NA	NA	False	NA	NA	NA	146731643	146671639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146690399_146690533_146691179_146691410_146700010_146700225_146705746_146705828_146731424
Isoform_143114_8	chr5	-	1746	5	FSM	ENSMUSG00000016510.12	ENSMUST00000110564.8	1257	5	-38	-451	0	-396	multi-exon	FALSE	canonical	3	9	junction_4	53.0023584380922	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGACCTTCACCTGACTC	NA	False	NA	-5	True	AATAAA	-30	NA	146900597	146891725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900521
Isoform_143115_21	chr5	-	1722	5	FSM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	0	409	0	-409	multi-exon	FALSE	canonical	3	7	junction_4	53.5863788662753	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900597	146891738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900532
Isoform_143116_59	chr5	-	1572	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	-1	3356	-1	-409	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900596	146891738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
Isoform_143118_95	chr5	-	1561	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	11	-438	-1	-409	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900596	146891738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
Isoform_143119_18	chr5	-	1971	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	10	-847	0	0	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTGCATTTGTGCTA	NA	False	NA	2	True	NA	NA	NA	146900597	146891329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
Isoform_143120_8	chr5	-	1527	4	NIC	ENSMUSG00000016510.12	novel	1134	4	NA	NA	-1	-400	intron_retention	FALSE	canonical	1	3	junction_3	56.7156650905785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATCTGACCTTCACCTG	NA	False	NA	-9	True	AATAAA	-26	NA	146900596	146891729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_146892626_146893596_146893755_146895634_146896087_146900575
Isoform_143122_63	chr5	-	4110	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	10	437	10	-437	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTTACATTCTTCC	4970	False	NA	-1	True	NA	NA	NA	147013386	146953901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
Isoform_143124_68	chr5	-	3900	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	32	625	32	-625	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGGTGAATATTTGG	4992	False	NA	-1	True	CATAAA	-16	NA	147013364	146954089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
Isoform_143125_21	chr5	-	4550	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	1	6	1	-6	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGAGCCCGCCTCATGTT	4961	False	NA	NA	False	NA	NA	NA	147013395	146953470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
Isoform_143127_3	chr5	-	1990	5	ISM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	23	11867	23	-10258	5prime_fragment	FALSE	canonical	3	53	junction_1	9.51314879522022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTCTGTGTA	4983	False	NA	NA	False	AAAACA	-32	NA	147013373	146965331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
Isoform_143128_3	chr5	-	2046	3	FSM	ENSMUSG00000029646.4	ENSMUST00000031650.4	2261	3	126	89	126	-89	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCCTGGATTTTATCTT	NA	False	NA	NA	False	GATAAA	-18	NA	147243954	147237703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_147238904_147239990_147240137_147243254
Isoform_143129_3	chr5	-	2232	6	FSM	ENSMUSG00000029650.11	ENSMUST00000118527.8	2210	6	-25	3	-25	1	multi-exon	FALSE	canonical	1	3	junction_4	0.894427190999916	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTGGTTTTCATTTT	NA	False	NA	NA	False	AATGAA	-27	NA	147831650	147815249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_147816025_147816502_147816660_147821006_147821091_147822780_147823652_147830642_147830856_147831518
Isoform_143144_191	chr5	-	7050	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.85655674939	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTGTGGTCTCAA	5517	False	NA	-5	True	AATAAA	-18	NA	148336615	148264221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_148266658_148266685_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
Isoform_14315_64	chr11	-	2358	9	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	-8856	-7	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	230.188204248176	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGATGACTTTGAGTGA	NA	False	NA	-8	True	GATAAA	-11	NA	72311395	72280946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72311055_72311162_72311290
Isoform_143151_27	chr5	-	7175	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-25	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	124.85655674939	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTGTGTGGTCTCAAG	5393	False	NA	-4	True	AATAAA	-19	NA	148336739	148264220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_148266658_148266685_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
Isoform_143152_74	chr5	-	6177	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-45	-906	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.85655674939	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCAGCTGGTTTTCACC	5486	False	NA	-4	True	NA	NA	NA	148336646	148265125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_148266658_148266685_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
Isoform_143157_9	chr5	-	3039	12	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	25	5461	25	1649	5prime_fragment	FALSE	canonical	3	383	junction_1	35.5351066081543	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAATCAG	5443	False	NA	NA	False	NA	NA	NA	148336689	148269680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
Isoform_143160_750	chr5	-	2641	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	-135	31	-8	-31	multi-exon	FALSE	canonical	3	361	junction_2	34.1641259217911	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAATAAAAAAAAAAAC	NA	False	NA	-35	True	AATAGA	-12	NA	148489607	148441475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
Isoform_143162_215	chr5	-	2668	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	-162	31	-35	-31	multi-exon	FALSE	canonical	3	361	junction_2	34.1641259217911	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAATAAAAAAAAAAAC	NA	False	NA	-35	True	AATAGA	-12	NA	148489634	148441475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
Isoform_143172_267	chr5	-	2542	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	-15	-463	-15	-31	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAATAAAAAAAAAAAC	NA	False	NA	-35	True	AATAGA	-12	NA	148489614	148441475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
Isoform_143187_3	chr5	-	1669	11	FSM	ENSMUSG00000041298.16	ENSMUST00000047257.15	6157	11	13	4475	-6	-376	multi-exon	FALSE	canonical	0	0	junction_7	3.86781592116274	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAATCAGAGGAATCTT	2456	False	NA	NA	False	ATTAAA	-16	NA	148865444	148812868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_148813147_148815667_148815795_148825688_148825824_148828438_148828566_148829319_148829479_148830492_148830599_148830958_148831087_148841376_148841540_148855405_148855567_148858046_148858223_148865335
Isoform_143198_1717	chr5	-	2302	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	4	532	4	-532	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATATTAGTTAAATG	6768	False	NA	-14	True	AATAAA	-17	NA	148989846	148984043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
Isoform_14320_11	chr11	-	2359	4	FSM	ENSMUSG00000057778.15	ENSMUST00000079681.6	2393	4	33	1	18	-1	multi-exon	FALSE	canonical	2	5	junction_3	4.02768199119819	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGCTTTTTTTTCTTTT	NA	False	NA	-1	True	AATAAA	-35	NA	72686649	72668058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686338
Isoform_143200_3794	chr5	-	1308	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	4	1526	4	0	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	3794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	6768	False	NA	NA	False	AGTAAA	-18	NA	148989846	148985037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
Isoform_143207_6	chr5	+	2234	5	Antisense	novelGene_ENSMUSG00000066551.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTAACATTACTCTCC	NA	False	NA	NA	False	NA	NA	NA	148984101	148989837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_148985720_148986533_148986712_148987104_148987251_148987397_148987562_148989709
Isoform_14322_6	chr11	-	2147	4	FSM	ENSMUSG00000057778.15	ENSMUST00000156294.8	2158	4	28	-17	-20	0	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCTTTTTTTTCTTTTG	NA	False	NA	0	True	AATAAA	-36	NA	72686940	72668057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686842
Isoform_14323_6	chr11	-	2065	4	FSM	ENSMUSG00000057778.15	ENSMUST00000156294.8	2158	4	108	-15	60	-2	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGCTTTTTTTTCTTT	NA	False	NA	-2	True	AATAAA	-34	NA	72686860	72668059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686842
Isoform_143244_41	chr5	-	3619	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	2	1	intron_retention	FALSE	canonical	3	48	junction_17	419.554775776112	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGCTTTGTCTCCG	NA	False	NA	-5	True	AATAAA	-25	NA	149559801	149540308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
Isoform_143250_1156	chr5	-	3499	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	3	300	3	1	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGCTTTGTCTCCG	NA	False	NA	-5	True	AATAAA	-25	NA	149559800	149540308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
Isoform_143251_1683	chr5	-	3403	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	98	301	-31	0	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559705	149540309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
Isoform_143255_109	chr5	-	3763	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	3	36	3	-36	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTTCTGAAGTCAATT	NA	False	NA	-25	True	NA	NA	NA	149559800	149540044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
Isoform_143256_200	chr5	-	3693	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	98	11	-31	-11	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTCATCTTGAGTT	NA	False	NA	0	True	TTTAAA	-2	NA	149559705	149540019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
Isoform_143265_96	chr5	-	3357	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	169	junction_18	290.373753405274	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGCTTTGTCTCCG	NA	False	NA	-5	True	AATAAA	-25	NA	149559818	149540308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559625_149559784
Isoform_14327_356	chr11	-	1314	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	16	2	16	-2	multi-exon	FALSE	canonical	3	946	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTGCGCATGGAATT	NA	False	NA	-29	True	AATAAA	-23	NA	73067847	73066346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_73067578_73067764
Isoform_14328_420	chr11	-	643	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	12	677	12	140	multi-exon	FALSE	canonical	3	946	junction_1	0	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCGTTCCTTGCTTAG	NA	False	NA	-22	True	ATTAAA	-13	NA	73067851	73067021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_73067578_73067764
Isoform_143288_4	chr5	-	1293	3	FSM	ENSMUSG00000041132.12	ENSMUST00000200840.2	1371	3	-15	93	-15	-90	multi-exon	FALSE	canonical	3	10	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGTTAGTTTTTGCAA	4545	False	NA	NA	False	AATAAA	-20	NA	150518008	150515309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_150516025_150516604_150516903_150517728
Isoform_143289_6	chr5	-	2962	7	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-14	764	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	94.7042179044254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGAAGTGGTGATCTT	5458	False	NA	NA	False	AATAAA	-10	NA	150589056	150530707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_150531906_150566633_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
Isoform_14329_9	chr11	-	1388	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	-59	3	-59	-3	multi-exon	FALSE	canonical	3	946	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTGCGCATGGAAT	NA	False	NA	-30	True	AATAAA	-22	NA	73067922	73066347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_73067578_73067764
Isoform_143294_256	chr5	-	1979	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	24	6979	-11	49	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTTTTTATAATC	5461	False	NA	-16	True	AATAAA	-18	NA	150589053	150566415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
Isoform_143297_21	chr5	-	4976	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	24	3982	-11	782	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTACTTGAAGCTTGC	5461	False	NA	NA	False	AATAAA	-30	NA	150589053	150563418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
Isoform_143298_11	chr5	-	5240	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	24	3718	-11	1046	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAGTGTCCTGAACAGA	5461	False	NA	NA	False	AATACA	-18	NA	150589053	150563154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
Isoform_143301_5	chr5	-	2115	2	ISM	ENSMUSG00000029655.18	ENSMUST00000144378.2	3842	3	-22	12288	13	1919	5prime_fragment	FALSE	canonical	3	228	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5450	False	NA	NA	False	NA	NA	NA	150589064	150583962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_150585979_150588965
Isoform_143306_375	chr5	-	1209	9	FSM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	47	61	0	2	multi-exon	FALSE	canonical	3	280	junction_1	24.5098832106561	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTTTGTGTTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	151574660	151566281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
Isoform_143307_5	chr5	-	1292	8	NIC	ENSMUSG00000033970.16	novel	1317	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	280	junction_1	25.7206341369758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCATTTGTGTTTGTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	151574668	151566284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_151566569_151567175_151567246_151568077_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
Isoform_143308_5	chr5	-	2036	8	NIC	ENSMUSG00000033970.16	novel	1317	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	280	junction_1	25.4550424017221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATCATTTGTGTTTGTG	NA	False	NA	-6	True	AATAAA	-17	NA	151574660	151566286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_151566569_151567175_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
Isoform_143309_11	chr5	-	420	3	Intergenic	novelGene_8739	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	209	junction_2	23	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGTGTGTTGATTAA	NA	False	NA	NA	False	NA	NA	NA	109992920	109984503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_109984676_109984863_109984991_109992799
Isoform_143310_3	chr5	-	5053	3	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10909	1496	multi-exon	FALSE	canonical	3	209	junction_2	23	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGTGCTCAACAATTAA	NA	False	NA	-2	True	NA	NA	NA	109992920	109979870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_109984676_109984863_109984991_109992799
Isoform_143311_7	chr5	-	681	4	Intergenic	novelGene_8738	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATCAATGTAGTAAATCC	NA	False	NA	NA	False	NA	NA	NA	109992918	109983093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
Isoform_143313_55	chr5	-	3883	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10885	1497	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGTGCTCAACAATTAAT	NA	False	NA	-1	True	NA	NA	NA	109992896	109979869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
Isoform_143316_5	chr5	-	2236	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10909	-174	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTCTTGGTCTTGGTAT	NA	False	NA	NA	False	NA	NA	NA	109992920	109981540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
Isoform_143318_12	chr5	-	2137	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	-1485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7846483061999	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTCTACTTCCTA	NA	False	NA	-3	True	NA	NA	NA	121757006	121736452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
Isoform_143319_7	chr5	-	2243	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	-1379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7846483061999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGACTCAGGCATCTAT	NA	False	NA	NA	False	GATAAA	-13	NA	121757006	121736346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
Isoform_14332_29	chr11	-	2699	12	FSM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	19	5	-2	-5	multi-exon	FALSE	canonical	3	14	junction_11	20.3534877308514	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACACTCGGAACGTTT	4484	False	NA	-6	True	ATTAAA	-18	NA	73089849	73074427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089743
Isoform_143320_4	chr5	-	3752	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_1	13.7846483061999	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTCTTGATCATGAT	NA	False	NA	0	True	NA	NA	NA	121757006	121734837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
Isoform_143321_82	chr5	-	1425	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1201	2	intron_retention	FALSE	canonical	3	94	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	721	False	NA	0	True	NA	NA	NA	31646493	31643974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_31645334_31646427
Isoform_143322_66	chr5	-	2015	4	NNC	ENSMUSG00000105471.2	novel	665	2	NA	NA	4	-12826	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	67.6214955961983	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCTTGGTATT	NA	False	NA	-3	True	NA	NA	NA	109944160	109930098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_109931814_109932961_109933023_109933207_109933335_109944048
Isoform_143323_9	chr5	-	1115	4	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	9.93310961716756	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGGTAGTATACTCTT	8597	False	NA	-3	True	NA	NA	NA	147949136	147941086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_147941718_147943327_147943469_147943860_147944081_147949013
Isoform_143324_3	chr5	-	1194	5	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	8.86002257333467	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTAGTATACTCTTTCT	8595	False	NA	0	True	NA	NA	NA	147949138	147941083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_147941718_147943327_147943469_147943860_147944081_147945259_147945334_147949013
Isoform_143325_30	chr5	-	1263	5	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	4.55521678957215	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGTATACTCTTTC	8604	False	NA	-1	True	NA	NA	NA	147949129	147941084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147949013
Isoform_143326_8	chr5	-	1344	6	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_5	7.83326241102646	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGTATACTCTTTC	8597	False	NA	-1	True	NA	NA	NA	147949136	147941084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147945259_147945334_147949013
Isoform_143327_5	chr5	-	1228	6	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	-6	10187	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	83.4491461909587	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCATGGAAATTTTCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	105007665	104950847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_104964564_104964626_104964862_104964990_105007532
Isoform_143328_17	chr5	-	1292	3	NNC	ENSMUSG00000029190.20	novel	2014	2	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_1	14.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTGTATTATGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	36853312	36828744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_36829428_36830091_36830587_36853198
Isoform_143329_9	chr5	-	1341	3	NNC	ENSMUSG00000029190.20	novel	2014	2	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_1	14.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTGTATTATGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	36853361	36828744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_36829428_36830091_36830587_36853198
Isoform_14333_119	chr11	-	2545	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	19	6	-2	-5	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACACTCGGAACGTTT	4484	False	NA	-6	True	ATTAAA	-18	NA	73089849	73074427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
Isoform_143332_21	chr5	-	309	2	Intergenic	novelGene_8769	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGGGTTCTATCGTAGC	NA	False	NA	-1	True	NA	NA	NA	113734553	113734148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_113734289_113734384
Isoform_143333_3	chr5	-	623	2	Intergenic	novelGene_8768	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTGTTCTGACCGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	113734566	113733847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_113734289_113734384
Isoform_143334_9	chr5	-	826	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTCTATGTGCAATCT	NA	False	NA	-3	True	NA	NA	NA	113734528	113711249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_113711932_113734384
Isoform_143335_3	chr5	-	2032	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GTAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	113734502	113710017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_113711932_113734384
Isoform_143336_5	chr5	-	1321	7	NNC	ENSMUSG00000037224.16	novel	712	4	NA	NA	-12	-1316	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	8.19891591749923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTTTTATTAGTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	34445805	34385247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_34385544_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
Isoform_143337_5	chr5	-	1255	7	NNC	ENSMUSG00000037224.16	novel	712	4	NA	NA	43	-1315	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	8.19891591749923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTTTATTAGTAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	34445738	34385246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_34385544_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
Isoform_143339_5	chr5	-	1894	5	NNC	ENSMUSG00000085271.8	novel	906	5	NA	NA	-7	607	intron_retention	FALSE	canonical	2	8	junction_4	1.08972473588517	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTTCCTCATGGTAC	NA	False	NA	NA	False	AATAGA	-15	NA	111909576	111881542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_111883050_111886992_111887080_111887701_111887776_111895707_111895859_111909501
Isoform_143340_3	chr5	-	1371	7	NNC	ENSMUSG00000037224.16	novel	712	4	NA	NA	-69	-1319	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.97914491994847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTTTTTATTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	34445862	34385250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_34385540_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
Isoform_143341_4	chr5	-	1294	7	NNC	ENSMUSG00000037224.16	novel	712	4	NA	NA	1	-1314	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.97914491994847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTTATTAGTAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	34445780	34385245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_34385540_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
Isoform_143343_5	chr5	-	2620	4	NNC	ENSMUSG00000029253.13	novel	1370	3	NA	NA	11	2973	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	64.3790856308682	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAGAAATAC	NA	False	NA	NA	False	AATAAA	-5	NA	86213431	86202001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_86204241_86206013_86206106_86209862_86209907_86213186
Isoform_143347_4	chr5	-	466	2	Intergenic	novelGene_9162	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGACTCTCTGCATAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	149572453	149571347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_149571694_149572333
Isoform_143348_3	chr5	-	3032	3	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1204	2520	intron_retention	FALSE	canonical	2	2	junction_1	46	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	718	False	NA	NA	False	NA	NA	NA	31646496	31641452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_31641682_31642599_31645334_31646427
Isoform_143349_5	chr5	-	2002	6	NNC	ENSMUSG00000062110.15	novel	436	2	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.4316025913722	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGTCTACTGGTTGCCT	NA	False	NA	NA	False	AATAAA	-21	NA	74692409	74555792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_74556105_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
Isoform_14335_5	chr11	-	2581	11	NNC	ENSMUSG00000005949.10	novel	2570	11	NA	NA	-277	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.5876176377938	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACACTCGGAACGTTT	4188	False	NA	-6	True	ATTAAA	-18	NA	73090145	73074427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73090003
Isoform_143350_3	chr5	-	2170	6	NNC	ENSMUSG00000062110.15	novel	3672	9	NA	NA	-6	62042	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.2239550858236	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTGGTCCCTCGTTA	NA	False	NA	NA	False	AATAAA	-30	NA	74692396	74493751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_74494245_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
Isoform_143351_6	chr5	-	177	2	Antisense	novelGene_ENSMUSG00000089080.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	415	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATATCCTTGCTGAT	NA	False	NA	NA	False	NA	NA	NA	33077220	33052242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_33052369_33077169
Isoform_143355_4	chr5	-	2625	2	Antisense	novelGene_ENSMUSG00000029432.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATTTGGAAAAACATCAA	NA	False	NA	NA	False	NA	NA	NA	129826717	129823918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_129824526_129824699
Isoform_143356_3	chr5	-	1627	12	NNC	ENSMUSG00000028969.11	novel	327	3	NA	NA	-32	10643	at_least_one_novel_splicesite	TRUE	non_canonical	1	2	junction_1	53.6067714977616	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGTCTGGCTTTCCTG	NA	False	NA	NA	False	CATAAA	-19	NA	24628560	24612595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_24613354_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
Isoform_14336_3	chr11	-	2703	12	NNC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	24.8752258181535	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGAACGTTTACTAGATGA	4465	False	NA	3	True	ATTAAA	-27	NA	73089868	73074418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73085981_73086112_73087463_73087544_73089743
Isoform_143362_26	chr5	+	1620	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-24	-1157	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCTGCCATTTCGTTT	NA	False	NA	18	True	NA	NA	NA	3391460	3571068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
Isoform_143363_6	chr5	+	1888	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-292	-1157	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCTGCCATTTCGTTT	NA	False	NA	18	True	NA	NA	NA	3391192	3571068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
Isoform_143365_5	chr5	+	4057	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-280	1024	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	3391204	3573249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
Isoform_14337_8	chr11	-	2380	10	NIC	ENSMUSG00000005949.10	novel	2570	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	20.4673784409952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGGAACGTTTACTAGA	4484	False	NA	0	True	ATTAAA	-24	NA	73089849	73074421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_73075878_73076063_73076182_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
Isoform_143371_3	chr5	+	1591	8	FSM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	-4	9938	-4	-1155	multi-exon	FALSE	canonical	3	9	junction_1	33.2627143099493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGCCATTTCGTTTTC	NA	False	NA	20	True	NA	NA	NA	3393888	3571070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3393972_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
Isoform_143373_5	chr5	+	1720	7	FSM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	-407	1157	-11	-1157	multi-exon	FALSE	canonical	3	75	junction_5	14.1852818873021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCTGCCATTTCGTTT	NA	False	NA	18	True	NA	NA	NA	3393904	3571068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
Isoform_143377_3	chr5	+	868	5	FSM	ENSMUSG00000058503.12	ENSMUST00000198598.5	2750	5	-4	1886	-1	-1886	multi-exon	FALSE	canonical	3	156	junction_4	22.642603648874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTTGCTGTGATGCTT	NA	False	NA	NA	False	NA	NA	NA	3593831	3609160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660
Isoform_143379_165	chr5	+	1986	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-1	-494	1	-4	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTTGTTGTCTTTGTG	NA	False	NA	15	True	AGTAAA	-11	NA	3593836	3620234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
Isoform_14338_8	chr11	-	4540	9	NIC	ENSMUSG00000005949.10	novel	2570	11	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	46	junction_8	9.19238815542512	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACACTCGGAACGTTT	4484	False	NA	-6	True	ATTAAA	-18	NA	73089849	73074427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_73075878_73076063_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
Isoform_143380_14	chr5	+	2315	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-20	-804	-15	306	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCTGTGCTCTTATC	NA	False	NA	4	True	AATAAA	-15	NA	3593817	3620544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
Isoform_143381_15	chr5	+	1923	11	FSM	ENSMUSG00000058503.12	ENSMUST00000199666.5	1450	11	22	-495	16	-3	multi-exon	FALSE	canonical	0	0	junction_10	76.7604064606227	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTGTTGTCTTTGTGT	NA	False	NA	16	True	AGTAAA	-12	NA	3593859	3620235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609137_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
Isoform_143385_19	chr5	+	4104	24	NIC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	33	-132	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	17.7117222191902	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTGGACCTCATTTGT	NA	False	NA	11	True	ATTAAA	-19	NA	3646231	3687098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_3646367_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
Isoform_143389_6	chr5	+	3715	21	ISM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	160	3175	27	-1854	5prime_fragment	FALSE	canonical	3	55	junction_8	11.6275534829989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGCCAATTAGTCATT	NA	False	NA	3	True	AATAAA	-18	NA	3646225	3684057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715
Isoform_14339_7	chr11	-	1681	7	NIC	ENSMUSG00000020774.10	novel	1530	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	6.39444203108363	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTAGTGATGACTGTGA	NA	False	NA	NA	False	ATTAAA	-14	NA	73215460	73195819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73213904_73214058_73215080
Isoform_143391_13	chr5	+	3622	21	ISM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	253	3175	-52	-1854	5prime_fragment	FALSE	canonical	3	55	junction_8	11.6275534829989	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGCCAATTAGTCATT	NA	False	NA	3	True	AATAAA	-18	NA	3646318	3684057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715
Isoform_143392_53	chr5	+	4165	24	FSM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	253	137	-52	134	multi-exon	FALSE	canonical	3	55	junction_8	11.5830199691965	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAATGGTGGACCTCATT	NA	False	NA	8	True	ATTAAA	-16	NA	3646318	3687095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
Isoform_143394_19	chr5	+	4257	24	FSM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	160	138	27	133	multi-exon	FALSE	canonical	3	55	junction_8	11.5830199691965	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCAATGGTGGACCTCAT	NA	False	NA	7	True	ATTAAA	-15	NA	3646225	3687094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
Isoform_143397_124	chr5	+	2974	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTATTTAAACCATTT	7986	False	NA	9	True	AATAAA	-22	NA	3853184	3891358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_143399_4	chr5	+	3307	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-336	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATCTATTATTTAAACC	7649	False	NA	5	True	AATAAA	-18	NA	3852847	3891354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_14340_8	chr11	-	1526	6	FSM	ENSMUSG00000020774.10	ENSMUST00000021119.9	1530	6	2	2	2	-2	multi-exon	FALSE	canonical	3	11	junction_5	4.1182520563948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTAGTGATGACTGTGA	NA	False	NA	NA	False	ATTAAA	-14	NA	73215458	73195819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73215080
Isoform_143400_18	chr5	+	3072	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-10	86	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGGTTTCCTTGCATCG	7975	False	NA	9	True	ATTAAA	-16	NA	3853173	3891445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_143401_4	chr5	+	2846	16	FSM	ENSMUSG00000000600.16	ENSMUST00000171023.8	5582	16	-212	2948	3	-4	multi-exon	FALSE	canonical	3	79	junction_15	46.0519513400054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCTATTATTTAAACCA	7994	False	NA	6	True	AATAAA	-19	NA	3853192	3891355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3890873
Isoform_143402_3	chr5	+	4452	16	NIC	ENSMUSG00000000600.16	novel	4293	16	NA	NA	-3	83	intron_retention	FALSE	canonical	0	0	junction_15	61.6151496522297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATGGGTTTCCTTGCA	7982	False	NA	6	True	ATTAAA	-13	NA	3853180	3891442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_143404_93	chr5	+	2928	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	1	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTATTTAAACCATTT	7986	False	NA	9	True	AATAAA	-22	NA	3853184	3891358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_143405_15	chr5	+	3016	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	0	-86	0	86	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGGTTTCCTTGCATCG	7985	False	NA	9	True	ATTAAA	-16	NA	3853183	3891445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_143407_5	chr5	+	2824	16	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	48.5859604778536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	7972	False	NA	8	True	AATAAA	-21	NA	3853170	3891357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3890873
Isoform_143408_47	chr5	+	1024	7	ISM	ENSMUSG00000040407.19	ENSMUST00000143365.8	2010	8	109	3188	13	91	5prime_fragment	FALSE	canonical	3	19	junction_3	6.50640709864771	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAAGCTAGCTCATGTG	NA	False	NA	NA	False	NA	NA	NA	3978286	4007801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623
Isoform_143409_4	chr5	+	1257	7	ISM	ENSMUSG00000040407.19	ENSMUST00000143365.8	2010	8	-124	3188	0	91	5prime_fragment	FALSE	canonical	3	19	junction_3	6.50640709864771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAAGCTAGCTCATGTG	NA	False	NA	NA	False	NA	NA	NA	3978053	4007801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623
Isoform_14341_17	chr11	-	6350	24	NIC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	177	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	5.74768795466461	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTCACATTTCTTGG	NA	False	NA	-2	True	AATAAA	-19	NA	74413400	74274308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
Isoform_143412_3	chr5	+	1903	8	FSM	ENSMUSG00000040407.19	ENSMUST00000143365.8	2010	8	110	-3	14	3	multi-exon	FALSE	canonical	3	19	junction_3	6.1145527311522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAAAATGCTGTGC	NA	False	NA	NA	False	AATAAA	-16	NA	3978287	4010992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111
Isoform_143413_4	chr5	+	6710	29	ISM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	80215	1108	-14926	-1108	3prime_fragment	TRUE	canonical	3	25	junction_2	14.6637481635522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTAGTTGAACCTTCTT	NA	False	NA	20	True	AATAAA	-22	NA	4058488	4130202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
Isoform_143415_85	chr5	+	1352	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	16	0	16	0	multi-exon	FALSE	canonical	3	119	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	4242382	4247651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_4242419_4246335
Isoform_143416_5	chr5	+	1565	3	NNC	ENSMUSG00000053178.6	novel	1368	2	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	4242376	4247652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_4242419_4245994_4246201_4246335
Isoform_143417_166	chr5	+	818	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	35	1398	0	27	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACAAGTCTGTTATAC	NA	False	NA	16	True	AATAAA	-22	NA	8106561	8117753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
Isoform_143418_52	chr5	+	2237	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	37	-23	2	23	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTCGTTTCACAAATA	NA	False	NA	7	True	AATAAA	-17	NA	8106563	8119174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
Isoform_143419_22	chr5	+	2308	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	37	-94	2	94	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTCACTTCATGAGT	NA	False	NA	78	True	NA	NA	NA	8106563	8119245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
Isoform_143420_84	chr5	+	923	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	37	1291	2	134	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATATTTTCTTGTGA	NA	False	NA	5	True	TATAAA	-22	NA	8106563	8117860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
Isoform_143422_17	chr5	+	2818	13	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.6829171678492	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAATATATACAGATGTG	NA	False	NA	NA	False	ATTAAA	-2	NA	8472890	8504781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_8473040_8474796_8474888_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
Isoform_143423_26	chr5	+	2786	12	FSM	ENSMUSG00000054099.12	ENSMUST00000066921.10	2784	12	-4	2	-4	-2	multi-exon	FALSE	canonical	3	29	junction_1	8.37055050175789	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTATTTGTGATTTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	8472845	8504795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
Isoform_143426_4	chr5	+	2666	11	FSM	ENSMUSG00000054099.12	ENSMUST00000170496.6	2602	11	-8	-56	-8	3	multi-exon	FALSE	canonical	2	9	junction_1	12.7342059037853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGTATTTGTGATT	NA	False	NA	NA	False	ATTAAA	-13	NA	8472890	8504792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_8473040_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
Isoform_143428_5	chr5	+	4336	28	FSM	ENSMUSG00000040584.9	ENSMUST00000047753.5	4997	28	13	648	13	-643	multi-exon	FALSE	canonical	0	0	junction_9	64.0965278576142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGCATTCATATTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	8710089	8797927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_8710223_8710661_8710733_8714545_8714595_8724682_8724843_8733383_8733436_8735220_8735413_8736126_8736299_8744065_8744191_8748485_8748658_8751608_8751723_8751866_8751978_8752152_8752279_8752368_8752573_8752792_8752964_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_14343_7	chr11	-	6568	24	NIC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	5.74768795466461	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGTTCACATTTCTTG	NA	False	NA	-3	True	AATAAA	-18	NA	74413619	74274309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
Isoform_143432_18	chr5	+	2452	6	ISM	ENSMUSG00000040584.9	ENSMUST00000126846.2	2705	10	13331	63	-138	-63	3prime_fragment	FALSE	canonical	3	112	junction_1	56.9582303095874	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATATCCATAA	NA	False	NA	NA	False	AATAAA	-10	NA	8783149	8798507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_143433_35	chr5	+	2367	6	ISM	ENSMUSG00000040584.9	ENSMUST00000126846.2	2705	10	13416	63	-53	-63	3prime_fragment	FALSE	canonical	3	112	junction_1	56.9582303095874	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATATCCATAA	NA	False	NA	NA	False	AATAAA	-10	NA	8783234	8798507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_143445_4	chr5	+	1452	4	ISM	ENSMUSG00000028970.10	ENSMUST00000196580.5	690	6	-5	6454	1	-6454	5prime_fragment	FALSE	canonical	3	144	junction_1	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCGTTTGTTCCTAT	NA	False	NA	NA	False	AATAAA	-35	NA	8848147	8857197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007
Isoform_143446_5	chr5	+	746	5	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-38	55437	1	-2773	5prime_fragment	FALSE	canonical	3	110	junction_4	17.1955662890176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGTTACCTTGGGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	8848147	8860878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557
Isoform_143448_7	chr5	+	1366	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-38	52778	1	-114	5prime_fragment	FALSE	canonical	3	110	junction_4	19.0850727009357	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATTATTTGTAACACAA	NA	False	NA	0	True	AATAAA	-18	NA	8848147	8863537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654
Isoform_143449_160	chr5	+	4344	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-38	0	1	0	multi-exon	FALSE	canonical	3	66	junction_6	57.377196351684	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848147	8916315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_143450_12	chr5	+	4407	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-101	0	-62	0	multi-exon	TRUE	canonical	3	66	junction_6	57.377196351684	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848084	8916315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_143453_9	chr5	+	4285	27	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	62.5254149509853	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848148	8916315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_143456_38	chr5	+	1805	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50937	0	-210	0	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	5174	False	NA	10	True	ATTAAA	-17	NA	8899122	8916315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_143458_60	chr5	+	1751	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50991	0	-156	0	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	5228	False	NA	10	True	ATTAAA	-17	NA	8899176	8916315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_143464_6	chr5	+	1913	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50829	0	-318	0	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	5066	False	NA	10	True	ATTAAA	-17	NA	8899014	8916315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_143468_260	chr5	+	1063	5	FSM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	-24	1	-24	-1	multi-exon	FALSE	canonical	3	208	junction_1	62.4019230472908	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTTTTTTTCCTCCTT	NA	False	NA	9	True	AATAAA	-20	NA	9150722	9169044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_9150860_9151216_9151396_9166479_9166531_9167458_9167564_9168453
Isoform_143470_6	chr5	+	2217	5	FSM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	-44	-1133	35	1133	multi-exon	FALSE	canonical	3	208	junction_1	62.4019230472908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTGATTCTCCATTC	NA	False	NA	NA	False	AATAAA	-16	NA	9150702	9170178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_9150860_9151216_9151396_9166479_9166531_9167458_9167564_9168453
Isoform_143473_6	chr5	+	1437	4	NIC	ENSMUSG00000079659.6	novel	1040	5	NA	NA	-38	2	intron_retention	FALSE	canonical	3	350	junction_1	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCCTCCTTTTT	NA	False	NA	12	True	AATAAA	-23	NA	9150708	9169047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_9151396_9166479_9166531_9167458_9167564_9168453
Isoform_143474_11	chr5	+	4137	21	FSM	ENSMUSG00000056004.17	ENSMUST00000134991.8	4115	21	-20	-2	-6	2	multi-exon	FALSE	canonical	0	0	junction_3	2.3685438564654	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTGTTTATTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	9316111	9513985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_9316457_9430277_9430399_9449180_9449377_9460583_9460732_9467984_9468072_9470616_9470723_9471504_9471658_9472301_9472391_9477689_9477871_9478404_9478534_9484620_9484712_9485326_9485430_9487705_9487844_9490719_9490984_9491633_9491808_9495363_9495554_9496893_9496991_9497719_9497822_9509179_9509307_9511321_9511501_9512868
Isoform_143475_228	chr5	+	862	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	285	0	-31	0	multi-exon	FALSE	canonical	3	465	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCACATGCCTCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	21087473	21091868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21087654_21091186
Isoform_143476_4	chr5	+	2522	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	273	-1648	-43	1648	multi-exon	FALSE	canonical	3	465	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACACAAAAAAAAAGATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	21087461	21093516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21087654_21091186
Isoform_143479_6	chr5	+	2716	2	FSM	ENSMUSG00000039899.6	ENSMUST00000035799.6	3788	2	9	1063	9	-1063	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTTTACAA	NA	False	NA	NA	False	NA	NA	NA	21577648	21582309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21578307_21580251
Isoform_143481_111	chr5	+	2945	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	6	76	6	-76	multi-exon	FALSE	canonical	1	21	junction_1	12.2873753029984	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCCTTTTTATTAATAT	NA	False	NA	15	True	AATAAA	-15	NA	21629961	21687046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
Isoform_143482_21	chr5	+	3038	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	5	-16	5	16	multi-exon	FALSE	canonical	1	21	junction_1	12.2873753029984	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATCAGAATTTATATAAG	NA	False	NA	107	True	AATAAA	-29	NA	21629960	21687138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
Isoform_143486_348	chr5	+	1991	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	146	84	8	2	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTTCCCCCACTGAC	NA	False	NA	21	True	AATAAA	-23	NA	21851022	21867608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
Isoform_143487_204	chr5	+	2079	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	146	-4	8	4	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAATTTGTTTTATTTGT	NA	False	NA	10	True	AGTAAA	-30	NA	21851022	21867696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
Isoform_143491_9	chr5	+	2251	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	-35	5	31	-5	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTTTTCCAATTTGT	NA	False	NA	1	True	AGTAAA	-21	NA	21850841	21867687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
Isoform_143495_425	chr5	+	1586	13	FSM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	24	5	24	1	multi-exon	TRUE	canonical	3	306	junction_5	33.8430815184827	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCGTTAGTCTGTTA	NA	False	NA	11	True	AATAAA	-13	NA	21942162	21962145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
Isoform_143504_2102	chr5	+	1451	12	ISM	ENSMUSG00000028932.9	ENSMUST00000030769.7	1785	13	1466	0	1466	0	3prime_fragment	FALSE	canonical	3	1482	junction_9	138.585355743117	2102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21991746	22008785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
Isoform_14352_310	chr11	-	1868	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	322	3613	-13	-3612	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTCTGGATGTAGATT	NA	False	NA	-10	True	AATAAA	-18	NA	74615174	74568387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_143524_8	chr5	+	2828	16	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	25	10528	17	-2501	5prime_fragment	FALSE	canonical	3	18	junction_10	3.53396220818629	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTAGTTCATGATTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	23639463	23698705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196
Isoform_143526_3	chr5	+	2821	15	NIC	ENSMUSG00000029004.16	novel	7252	26	NA	NA	1	-2493	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	7.00874089830633	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGATTTCTCTAAGGT	NA	False	NA	NA	False	ATTAAA	-25	NA	23639439	23698713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196
Isoform_14353_164	chr11	-	1897	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	297	3609	-38	-3608	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGGATGTAGATTGAAC	NA	False	NA	-6	True	AATAAA	-22	NA	74615199	74568383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_143531_41	chr5	+	3264	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	34	0	4	0	multi-exon	TRUE	canonical	2	56	junction_5	10.4591040315534	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGTATTTCTTTGTGTG	NA	False	NA	4	True	NA	NA	NA	23992742	24025367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
Isoform_143534_8	chr5	+	1386	4	FSM	ENSMUSG00000097180.6	ENSMUST00000181574.6	1375	4	-16	5	-16	-5	multi-exon	FALSE	canonical	0	0	junction_3	11.0453610171873	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTGTCGTCAGGTTG	NA	False	NA	NA	False	NA	NA	NA	24055578	24060031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24055620_24057118_24057154_24057715_24057759_24058764
Isoform_143536_3	chr5	+	3876	2	NIC	ENSMUSG00000097180.6	novel	318	3	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	27	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCGTCAGGTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	24055597	24060035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24057154_24057715
Isoform_143537_10	chr5	+	1349	3	ISM	ENSMUSG00000097180.6	ENSMUST00000181574.6	1375	4	1523	2	1519	-2	3prime_fragment	FALSE	canonical	0	0	junction_2	13.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCGTCAGGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	24057117	24060034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_24057154_24057715_24057759_24058764
Isoform_143539_72	chr5	+	2961	11	FSM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	6	-1	5	1	multi-exon	FALSE	canonical	3	50	junction_4	4.51220566907139	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGATTTGCTTTGTTTAT	NA	False	NA	7	True	ATTAAA	-14	NA	24305608	24365784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
Isoform_143541_5	chr5	+	2694	3	ISM	ENSMUSG00000048439.16	ENSMUST00000115101.4	1624	6	-2	11277	-2	1679	5prime_fragment	FALSE	canonical	3	61	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	5181	False	NA	NA	False	NA	NA	NA	24369995	24376558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_24370202_24372340_24372564_24374293
Isoform_143542_69	chr5	+	2875	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	35	4	-2	-4	multi-exon	TRUE	canonical	3	52	junction_5	7.43116560320265	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGACTGTCTGTTATC	5181	False	NA	NA	False	NA	NA	NA	24369995	24389007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
Isoform_143545_3	chr5	+	2799	6	FSM	ENSMUSG00000048439.16	ENSMUST00000115101.4	1624	6	-2	-1173	-2	-3	multi-exon	FALSE	canonical	2	3	junction_3	25.7013618316229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGACTGTCTGTTATCT	5181	False	NA	NA	False	NA	NA	NA	24369995	24389008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24382997_24383085_24386078_24386164_24386905
Isoform_143546_15	chr5	+	4018	26	FSM	ENSMUSG00000028978.13	ENSMUST00000030834.7	4132	26	-32	146	-32	1	multi-exon	FALSE	canonical	1	2	junction_12	2.97079114042034	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGTGAGTTACAATGA	NA	False	NA	NA	False	CATAAA	-25	NA	24569775	24589326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24570000_24571757_24571861_24572195_24572345_24572478_24572642_24573816_24573909_24573987_24574130_24574795_24574936_24575018_24575194_24575785_24575888_24576602_24576798_24576899_24576974_24577124_24577270_24577631_24577737_24582278_24582347_24582590_24582708_24582808_24582984_24584706_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
Isoform_143547_10	chr5	+	2151	11	NIC	ENSMUSG00000028978.13	novel	4132	26	NA	NA	12874	1	intron_retention	FALSE	canonical	2	4	junction_2	2.64764045897475	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGTGAGTTACAATGA	4942	False	NA	NA	False	CATAAA	-25	NA	24582681	24589326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24582984_24584706_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
Isoform_143549_888	chr5	+	2677	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	259	3	6	-3	multi-exon	FALSE	canonical	3	156	junction_4	17.0567679626984	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCCGAGGCTGTAGCT	NA	False	NA	26	True	AATAAA	-16	NA	24599411	24614940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
Isoform_14355_160	chr11	-	4398	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	322	1083	-13	-1082	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGATGGTTGTTGATTGT	NA	False	NA	-6	True	AATAAA	-20	NA	74615174	74565857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_143556_25	chr5	+	2992	15	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-10	3	intron_retention	FALSE	canonical	3	156	junction_3	17.6207206412895	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAAATTTTCAAAGAG	NA	False	NA	11	True	AATAAA	-1	NA	24599383	24614925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24599582_24604910_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
Isoform_143559_3	chr5	+	4564	23	NIC	ENSMUSG00000028962.15	novel	966	4	NA	NA	-58	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.9707537579024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTTGGTCTTGTGTCTT	NA	False	NA	9	True	AGTAAA	-18	NA	24628776	24645947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24629367_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
Isoform_143560_65	chr5	+	4130	23	FSM	ENSMUSG00000028962.15	ENSMUST00000080067.13	4179	23	45	4	1	-1	multi-exon	FALSE	canonical	3	23	junction_2	8.13471288485391	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTAGGCTTGGTCTTGTGT	NA	False	NA	6	True	AGTAAA	-15	NA	24630274	24645944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
Isoform_143562_3	chr5	+	4278	22	NIC	ENSMUSG00000028962.15	novel	4179	23	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	23	junction_2	8.25363247180245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTAGGCTTGGTCTTGTGT	NA	False	NA	6	True	AGTAAA	-15	NA	24630257	24645944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
Isoform_143563_3	chr5	+	4051	22	FSM	ENSMUSG00000028962.15	ENSMUST00000115049.9	3924	22	-129	2	-129	-2	multi-exon	FALSE	canonical	0	0	junction_1	10.8604840305893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTAGGCTTGGTCTTGTG	NA	False	NA	5	True	AGTAAA	-14	NA	24633076	24645943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24633272_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
Isoform_143564_34	chr5	+	2324	9	FSM	ENSMUSG00000023353.15	ENSMUST00000199647.2	1061	9	-409	-854	-252	0	multi-exon	FALSE	canonical	3	38	junction_8	47.1665930505904	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTCTTGGTTCCTTCC	NA	False	NA	13	True	AATAAA	-13	NA	24656922	24688180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24687263
Isoform_143566_34	chr5	+	3437	18	FSM	ENSMUSG00000023353.15	ENSMUST00000024123.9	3207	18	-230	0	-230	0	multi-exon	FALSE	canonical	3	41	junction_12	48.4543090880899	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24656944	24707045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
Isoform_143570_5	chr5	+	3313	16	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-423	2	combination_of_known_junctions	FALSE	canonical	3	94	junction_11	24.1655402036316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	NA	False	NA	13	True	AATAAA	-19	NA	24656751	24707037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
Isoform_143571_46	chr5	+	3221	16	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-323	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_11	24.1655402036316	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24656851	24707045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
Isoform_143573_4	chr5	+	2734	9	FSM	ENSMUSG00000023353.15	ENSMUST00000199856.2	2685	9	-54	5	-54	-3	multi-exon	FALSE	canonical	2	13	junction_1	66.5934493775476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTCGTGTCTTGGTTCCT	NA	False	NA	10	True	AATAAA	-10	NA	24679157	24688177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24680181_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24687263
Isoform_143574_3	chr5	+	3867	18	NIC	ENSMUSG00000023353.15	novel	1770	9	NA	NA	-61	-2	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	56.5819979441296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCCTTTCTCCTTTGG	NA	False	NA	9	True	AATAAA	-15	NA	24679150	24707033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24680181_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
Isoform_143575_7	chr5	+	3550	16	NIC	ENSMUSG00000023353.15	novel	1770	9	NA	NA	-44	-3	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	43.4855787078378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTTGGTGCCTCAGT	NA	False	NA	18	True	AATAAA	-24	NA	24679167	24707042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24680181_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
Isoform_143578_121	chr5	+	3724	4	FSM	ENSMUSG00000038181.17	ENSMUST00000121863.5	3715	4	-8	-1	0	1	multi-exon	FALSE	canonical	3	23	junction_2	9.8770215933527	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTTTAGGTCTAGGG	NA	False	NA	4	True	ATTAAA	-15	NA	24791739	24797483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24793299_24794094_24794660_24795306_24795490_24796066
Isoform_143579_10	chr5	+	4383	3	NIC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	41	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTTTTTAGGTCTAG	NA	False	NA	2	True	ATTAAA	-13	NA	24791725	24797481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24793299_24794094_24795490_24796066
Isoform_143580_4	chr5	+	5166	2	NIC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTTTTAGGTCTAGG	NA	False	NA	3	True	ATTAAA	-14	NA	24791739	24797482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_24795490_24796066
Isoform_143582_191	chr5	+	3106	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	162	1	-1	-1	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGTCTGACGCAGTG	NA	False	NA	10	True	AATAAA	-19	NA	24890983	24915375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_143583_276	chr5	+	1948	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	160	1161	-3	-1159	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGCTTCTTTGCGTTCC	NA	False	NA	24	True	TATAAA	-20	NA	24890981	24914215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_143587_23	chr5	+	3152	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	116	1	-47	-1	multi-exon	TRUE	canonical	3	384	junction_1	91.6660977100463	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGTCTGACGCAGTG	NA	False	NA	10	True	AATAAA	-19	NA	24890937	24915375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_143588_24	chr5	+	1990	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	121	1158	-42	-1156	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTCTTTGCGTTCCTCT	NA	False	NA	27	True	TATAAA	-23	NA	24890942	24914218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_143589_171	chr5	+	3092	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	455	-1	0	-1	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGTCTGACGCAGTG	NA	False	NA	10	True	AATAAA	-19	NA	24890984	24915375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_14359_34	chr11	-	5475	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	322	6	-13	-5	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGATCTGGTGGGGTT	NA	False	NA	NA	False	ATTAAA	-41	NA	74615174	74564780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_143590_239	chr5	+	1931	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	452	1163	-3	-1163	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAATGCTTCTTTGCG	NA	False	NA	20	True	TATAAA	-16	NA	24890981	24914211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_143592_28	chr5	+	3139	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	408	-1	-47	-1	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGTCTGACGCAGTG	NA	False	NA	10	True	AATAAA	-19	NA	24890937	24915375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_143608_381	chr5	+	2536	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	9	7	9	-6	multi-exon	FALSE	canonical	3	184	junction_8	26.0711042984152	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGGATGTTTGACTCTTC	NA	False	NA	6	True	AATAAA	-20	NA	25427888	25470909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
Isoform_143609_259	chr5	+	2577	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	-32	7	-32	-6	multi-exon	FALSE	canonical	3	184	junction_8	26.0711042984152	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGGATGTTTGACTCTTC	NA	False	NA	6	True	AATAAA	-20	NA	25427847	25470909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
Isoform_143612_4	chr5	+	455	2	FSM	ENSMUSG00000056367.15	ENSMUST00000198693.2	428	2	-59	32	-17	-32	multi-exon	FALSE	canonical	2	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTAATAATCCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	25964977	25982306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_25965127_25982000
Isoform_143613_190	chr5	+	2105	12	FSM	ENSMUSG00000056367.15	ENSMUST00000088244.6	1712	12	-47	-346	-18	0	multi-exon	FALSE	canonical	3	90	junction_4	20.0016528242663	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	10	True	AATAAA	-18	NA	25964976	26055686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
Isoform_143617_14	chr5	+	1969	11	NIC	ENSMUSG00000056367.15	novel	1712	12	NA	NA	-26	0	combination_of_known_splicesites	TRUE	canonical	3	16	junction_6	37.7095478625772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	10	True	AATAAA	-18	NA	25964968	26055686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
Isoform_143620_24	chr5	+	2048	11	FSM	ENSMUSG00000056367.15	ENSMUST00000128727.8	2031	11	-17	0	-17	0	multi-exon	FALSE	canonical	3	28	junction_1	35.2080956599473	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	10	True	AATAAA	-18	NA	25964977	26055686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_25965127_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
Isoform_143621_5	chr5	+	2040	17	ISM	ENSMUSG00000061576.16	ENSMUST00000101471.4	4491	26	-41	30462	-41	13	5prime_fragment	TRUE	canonical	2	6	junction_2	2.78107443266087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAAGCTCTGGCTCCCT	NA	False	NA	NA	False	AATAAA	-26	NA	27466931	27902036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847
Isoform_143622_7	chr5	+	3506	26	FSM	ENSMUSG00000061576.16	ENSMUST00000101471.4	4491	26	-33	1018	-33	22	multi-exon	FALSE	canonical	2	5	junction_22	2.910395162173	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCTGTCTCTGTTAA	NA	False	NA	NA	False	GATAAA	-14	NA	27466939	27931480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847_27901896_27914447_27914547_27917605_27917676_27919369_27919565_27923451_27923507_27926042_27926155_27927670_27927730_27928369_27928443_27928538_27928613_27930602
Isoform_143626_3231	chr5	+	2689	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	2	6	2	-6	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	3231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCTGTTGTATTCCT	NA	False	NA	8	True	ATTAAA	-7	NA	28276362	28283654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
Isoform_14363_82	chr11	-	4422	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	297	1084	-38	-1083	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGATGGTTGTTGATTG	NA	False	NA	-7	True	AATAAA	-19	NA	74615199	74565858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_143645_23	chr5	+	3562	2	FSM	ENSMUSG00000039095.9	ENSMUST00000036177.9	3539	2	4	-27	4	27	multi-exon	FALSE	canonical	3	25	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTGGGATGGAAGGT	2433	False	NA	NA	False	AATAAA	-21	NA	28370695	28377191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28372183_28375116
Isoform_143646_15	chr5	+	3635	2	FSM	ENSMUSG00000039095.9	ENSMUST00000036177.9	3539	2	-69	-27	-69	27	multi-exon	FALSE	canonical	3	25	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTGGGATGGAAGGT	2360	False	NA	NA	False	AATAAA	-21	NA	28370622	28377191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28372183_28375116
Isoform_143651_7	chr5	+	1105	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-37	2887	-12	-3	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGGCTTGTTTCCTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	28522162	28557690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
Isoform_143653_11	chr5	+	2056	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-9	1908	-9	976	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTATATACATTGGTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	28522190	28558669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
Isoform_143655_3	chr5	+	1984	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-42	2013	-17	871	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGATGGTCTGTCAG	NA	False	NA	NA	False	AATAAA	-14	NA	28522157	28558564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
Isoform_143656_3	chr5	+	1416	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-344	2883	-263	1	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTTTCCTTGATCT	NA	False	NA	NA	False	ATTAAA	-16	NA	28521855	28557694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
Isoform_143657_7	chr5	+	6567	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	-195	3138	-139	-4	multi-exon	FALSE	canonical	3	71	junction_15	26.3991792801721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTAACCCTCATCTGTG	NA	False	NA	3	True	CATAAA	-17	NA	28521979	28621099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
Isoform_143658_7	chr5	+	6667	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	-292	3135	-236	-1	multi-exon	TRUE	canonical	3	71	junction_15	26.3991792801721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACCCTCATCTGTGTAT	NA	False	NA	6	True	CATAAA	-20	NA	28521882	28621102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
Isoform_143659_71	chr5	+	6386	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	-10	3134	-10	0	multi-exon	FALSE	canonical	3	71	junction_15	26.3991792801721	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	7	True	CATAAA	-21	NA	28522164	28621103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
Isoform_14366_20	chr11	-	5500	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	297	6	-38	-5	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGATCTGGTGGGGTT	NA	False	NA	NA	False	ATTAAA	-41	NA	74615199	74564780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_143661_42	chr5	+	6388	19	NIC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_15	30.0263772928626	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACCCTCATCTGTGTAT	NA	False	NA	6	True	CATAAA	-20	NA	28522158	28621102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
Isoform_143662_4	chr5	+	3871	6	FSM	ENSMUSG00000048271.15	ENSMUST00000090355.11	1032	6	46	-2885	-10	1	multi-exon	FALSE	canonical	3	22	junction_5	51.3443278269372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATTTTGTATGTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	28522164	28560578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469
Isoform_143663_13	chr5	+	6282	18	FSM	ENSMUSG00000048271.15	ENSMUST00000114884.8	6256	18	-16	-10	-16	10	multi-exon	FALSE	canonical	3	22	junction_5	33.4726040951925	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATTATTTGTTCAC	NA	False	NA	17	True	CATAAA	-31	NA	28522158	28621113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
Isoform_143664_7	chr5	+	6239	18	NIC	ENSMUSG00000048271.15	novel	6256	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	36.3348517719172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	7	True	CATAAA	-21	NA	28522188	28621103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
Isoform_143669_4	chr5	+	1423	9	NIC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	1	-43	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	11.1242977306435	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGGTCTTTATTGCA	NA	False	NA	5	True	AATATA	-11	NA	29400993	29430436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_29401083_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
Isoform_143670_273	chr5	+	2810	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	42	6367	42	5121	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGTGGCACGTGTCT	3001	False	NA	5	True	TTTAAA	-7	NA	29639703	29656474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
Isoform_143676_9	chr5	+	4853	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	21	4345	21	-4345	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAGCAACTTTTAAG	2980	False	NA	NA	False	AATAAA	-17	NA	29639682	29658496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
Isoform_143677_20	chr5	+	2538	11	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	52	5122	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	52.8295371927485	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGTGGCACGTGTCTT	3011	False	NA	6	True	TTTAAA	-8	NA	29639713	29656475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
Isoform_143679_7	chr5	+	2995	11	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	52	5579	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	52.8295371927485	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAGCAGGCTCTTAAGT	3011	False	NA	NA	False	NA	NA	NA	29639713	29656932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
Isoform_143682_456	chr5	+	4311	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-16	753	-16	-753	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCGGGCTGCGTCTCT	NA	False	NA	22	True	ATTAAA	-14	NA	29774223	29880337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
Isoform_143683_333	chr5	+	5036	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-16	28	-16	-28	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATTGTGTTGGAGTTTT	NA	False	NA	10	True	ATTAAA	-10	NA	29774223	29881062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
Isoform_143712_910	chr5	+	1548	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	46	11	-3	-11	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTGCAGCCTTCTT	4592	False	NA	31	True	AATAAA	-31	NA	29940983	29972090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
Isoform_143715_26	chr5	+	1425	9	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	298	4775	-3	-4	5prime_fragment	FALSE	canonical	3	694	junction_8	427.836252992894	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGATGTGTATGGAGTA	4592	False	NA	NA	False	ATTAAA	-15	NA	29940983	29986701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
Isoform_143719_475	chr5	+	2587	10	FSM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	312	19	5	-19	multi-exon	FALSE	canonical	3	618	junction_9	548.115559591832	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGTTTTATACATTTA	4606	False	NA	14	True	AATAAA	-25	NA	29940997	29991457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
Isoform_143722_33	chr5	+	1961	7	NIC	ENSMUSG00000029131.15	novel	1024	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	922.086522814186	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTTGTATTTGGTCAG	4602	False	NA	12	True	AATAAA	-20	NA	29940993	29962966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29959590_29961231_29961337_29962545
Isoform_143738_9	chr5	+	2268	2	FSM	ENSMUSG00000104667.2	ENSMUST00000197982.2	2249	2	-12	-7	-12	7	multi-exon	FALSE	canonical	2	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGCACCATGTGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	30297925	30302691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30298047_30300544
Isoform_143739_3	chr5	+	2382	3	NNC	ENSMUSG00000104667.2	novel	2249	2	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTCTGGAGCACCATGT	NA	False	NA	NA	False	AATAAA	-17	NA	30297938	30302687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_30298047_30299680_30299812_30300544
Isoform_143740_35	chr5	+	2589	3	ISM	ENSMUSG00000044576.7	ENSMUST00000058045.5	3865	6	9526	0	9526	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGGGTGTTGGCTGA	NA	False	NA	NA	False	AATAAA	-29	NA	30319684	30323376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_30319986_30320884_30321055_30321258
Isoform_143742_440	chr5	+	1998	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	25	10	1	1	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACTGTTCGTAGTCTCG	NA	False	NA	0	True	AATAAA	-15	NA	30360270	30389581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
Isoform_143747_164	chr5	+	2022	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114786.8	2048	16	22	4	-9	3	multi-exon	FALSE	canonical	0	0	junction_1	146.097988426337	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	2	True	AATAAA	-17	NA	30360291	30389583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30360381_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
Isoform_143749_12	chr5	+	2005	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114783.6	2045	16	41	-1	10	1	multi-exon	FALSE	canonical	1	1	junction_1	145.866361974088	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACTGTTCGTAGTCTCG	NA	False	NA	0	True	AATAAA	-15	NA	30360310	30389581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30360385_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
Isoform_143753_59	chr5	+	3283	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	66	3454	0	0	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTTGTCACTGTTGA	NA	False	NA	3	True	AGTAAA	-14	NA	30437644	30473971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
Isoform_143758_10	chr5	+	6763	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	41	-1	-13	1	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGTTTTCAAGTTGTC	NA	False	NA	NA	False	AATAAA	-24	NA	30437619	30477426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
Isoform_143759_9	chr5	+	1971	6	NIC	ENSMUSG00000029175.18	novel	3088	6	NA	NA	-5	376	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	45.2035396844097	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGATGTTTTGACTTCC	6673	False	NA	13	True	NA	NA	NA	30805271	30815964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814189_30814720
Isoform_143760_163	chr5	+	3007	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	30	51	-4	-51	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTTGTTTTGGAATTTA	6708	False	NA	3	True	AATAAA	-14	NA	30805306	30817022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
Isoform_143761_439	chr5	+	1956	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	30	1102	-4	383	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGACTTCCTTGATGT	6708	False	NA	20	True	NA	NA	NA	30805306	30815971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
Isoform_143762_20	chr5	+	3060	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	30	-2	-4	2	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTTTTTTAAATGAAAG	6708	False	NA	56	True	AATAAA	-16	NA	30805306	30817075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
Isoform_143764_7	chr5	+	2183	5	NIC	ENSMUSG00000029175.18	novel	3088	6	NA	NA	-4	375	intron_retention	FALSE	canonical	3	97	junction_3	8.8423695919137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGATGTTTTGACTTC	6694	False	NA	12	True	NA	NA	NA	30805292	30815963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_30805443_30812091_30812165_30812838_30813445_30814090_30814202_30814720
Isoform_143767_19	chr5	+	1477	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	1	-447	1	-5	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATTGAAGTAAAGTTAC	9187	False	NA	NA	False	NA	NA	NA	30824241	30832169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
Isoform_143768_183	chr5	+	1057	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	0	-26	0	-5	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCCGTGGCAGTCCCG	9186	False	NA	35	True	AATAAA	-19	NA	30824240	30831748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
Isoform_143775_846	chr5	+	915	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	128	423	-7	-2	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGTGGCAGTCCCGCCA	9194	False	NA	38	True	AATAAA	-22	NA	30824248	30831751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
Isoform_143777_51	chr5	+	1307	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	154	5	-4	-5	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATTGAAGTAAAGTTAC	9220	False	NA	NA	False	NA	NA	NA	30824274	30832169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
Isoform_143782_15	chr5	+	1411	9	NIC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-24	95	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	19.6050854372023	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGTCCCTTATTTT	NA	False	NA	1	True	AATAAA	-10	NA	30869213	30944373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30944046
Isoform_143784_91	chr5	+	4478	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	306	407	-24	-401	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTTCTAGGTTTGTG	NA	False	NA	9	True	AATAAA	-19	NA	30869213	30956312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
Isoform_143785_81	chr5	+	4879	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	306	6	-24	0	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCCTCTGTTGTGTTTT	NA	False	NA	5	True	ATTAAA	-17	NA	30869213	30956713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
Isoform_143787_3	chr5	+	5358	12	NIC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	45	junction_9	9.33313655833498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCCTCTGTTGTGTTTT	NA	False	NA	5	True	ATTAAA	-17	NA	30869219	30956713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30949672_30951277_30951447_30953580
Isoform_143788_11	chr5	+	1839	7	FSM	ENSMUSG00000029166.15	ENSMUST00000200692.4	1816	7	-21	-2	0	2	multi-exon	FALSE	canonical	2	5	junction_2	4.56131072780134	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTCCTCAATTGACC	2298	False	NA	15	True	AATAAA	-15	NA	30972076	31023405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020705_31021917_31022073_31022158_31022312_31022471
Isoform_143789_11	chr5	+	1882	7	FSM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	93	46	1	1	multi-exon	FALSE	canonical	2	2	junction_4	5.53774924194538	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGATTTCCTCAATTGAC	2299	False	NA	14	True	AATAAA	-14	NA	30972077	31023404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
Isoform_143790_9	chr5	+	3608	5	NIC	ENSMUSG00000029166.15	novel	2442	6	NA	NA	4	2	intron_retention	FALSE	canonical	2	5	junction_2	4.49305018890286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTCCTCAATTGACC	2302	False	NA	15	True	AATAAA	-15	NA	30972080	31023405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_30972243_31019150_31019279_31019841_31022073_31022158_31022312_31022471
Isoform_143791_1052	chr5	+	2769	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1624	1717	1	0	multi-exon	FALSE	canonical	3	358	junction_2	22.5422346662881	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026979	31034807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
Isoform_143800_49	chr5	+	2920	16	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	0	0	intron_retention	TRUE	canonical	3	358	junction_2	22.4453905191145	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026978	31034807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
Isoform_143808_5	chr5	+	3263	16	FSM	ENSMUSG00000029165.18	ENSMUST00000201917.4	3579	16	11	305	5	-6	multi-exon	FALSE	canonical	2	6	junction_1	10.2792131129879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCAGGTGTAGTTGCT	NA	False	NA	4	True	AATAAA	-12	NA	31046289	31064004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31046426_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
Isoform_143809_3	chr5	+	3204	15	FSM	ENSMUSG00000029165.18	ENSMUST00000201168.4	3199	15	-13	8	0	-8	multi-exon	FALSE	canonical	2	6	junction_1	13.4651856463175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCCAGGTGTAGTTG	NA	False	NA	2	True	AATAAA	-10	NA	31046299	31064002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31046426_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062974_31063106_31063459
Isoform_14381_8	chr11	-	2903	8	ISM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	39140	-1	2655	1	3prime_fragment	FALSE	canonical	3	54	junction_4	7.7643875666864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCTGATGGCTATTTGT	7981	False	NA	-2	True	AATAAA	-20	NA	74748746	74740085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443
Isoform_143810_6	chr5	+	3779	17	NIC	ENSMUSG00000029165.18	novel	3296	17	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	12.3888811036348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCCAGGTGTAGTTG	NA	False	NA	2	True	AATAAA	-10	NA	31046301	31064002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048217_31048305_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
Isoform_143811_5	chr5	+	2458	11	ISM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	341	7394	-11	-1	5prime_fragment	FALSE	canonical	3	26	junction_1	6.64529909033446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCTGCAGCCTGTCCTG	NA	False	NA	NA	False	AATAAA	-17	NA	31046658	31053437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109
Isoform_143812_4	chr5	+	2822	11	ISM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	-21	7392	-3	1	5prime_fragment	FALSE	canonical	3	26	junction_1	6.64529909033446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTGCAGCCTGTCCTGCG	NA	False	NA	NA	False	AATAAA	-19	NA	31046296	31053439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109
Isoform_143813_3	chr5	+	3118	12	FSM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	3	0	3	0	multi-exon	FALSE	canonical	3	26	junction_1	7.05585742252082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGATGACTACTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	31046320	31060831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396
Isoform_143814_10	chr5	+	3674	16	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	6.71118469422501	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCAGGTGTAGTTGCT	NA	False	NA	4	True	AATAAA	-12	NA	31046321	31064004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
Isoform_143815_10	chr5	+	3337	16	NIC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	-11	-6	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	6.71118469422501	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCAGGTGTAGTTGCT	NA	False	NA	4	True	AATAAA	-12	NA	31046658	31064004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
Isoform_143816_3	chr5	+	3630	15	NIC	ENSMUSG00000029165.18	novel	3199	15	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_13	11.0787993897519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046322	31064008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062974_31063106_31063459
Isoform_143817_3	chr5	+	4314	15	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	-2	-6	intron_retention	TRUE	canonical	3	30	junction_14	5.87497286142234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCAGGTGTAGTTGCT	NA	False	NA	4	True	AATAAA	-12	NA	31046276	31064004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
Isoform_143818_9	chr5	+	3832	8	FSM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	9	11	9	-11	multi-exon	TRUE	canonical	2	6	junction_1	4.70345075232981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTACAAAACATAGCTATTC	NA	False	NA	11	True	AATAAA	-16	NA	31070754	31078610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31071389_31072325_31072452_31072860_31073082_31074277_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
Isoform_143819_14	chr5	+	3671	8	FSM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	176	5	-161	-5	multi-exon	FALSE	canonical	2	6	junction_1	4.70345075232981	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGCTATTCTGCTCT	NA	False	NA	17	True	AATAAA	-22	NA	31070921	31078616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31071389_31072325_31072452_31072860_31073082_31074277_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
Isoform_14382_44	chr11	-	4902	24	FSM	ENSMUSG00000038351.15	ENSMUST00000081799.6	4873	24	-27	-2	-27	2	multi-exon	FALSE	canonical	3	24	junction_12	16.1025776095344	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74787913	74740089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
Isoform_143822_5	chr5	+	1337	7	FSM	ENSMUSG00000029162.16	ENSMUST00000201571.4	1087	7	-48	-202	-48	0	multi-exon	FALSE	canonical	3	16	junction_1	5.24933858267454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTCTGTCTGTCTG	1094	False	NA	9	True	AATAAA	-18	NA	31078885	31088592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31079352_31082082_31082200_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
Isoform_143823_6	chr5	+	999	7	FSM	ENSMUSG00000029162.16	ENSMUST00000201571.4	1087	7	290	-202	22	0	multi-exon	FALSE	canonical	3	16	junction_1	5.24933858267454	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTCTGTCTGTCTG	1432	False	NA	9	True	AATAAA	-18	NA	31079223	31088592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31079352_31082082_31082200_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
Isoform_143824_5	chr5	+	1081	7	FSM	ENSMUSG00000029162.16	ENSMUST00000201571.4	1087	7	206	-200	-37	1	multi-exon	FALSE	canonical	3	16	junction_1	5.24933858267454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTCTGTCTGTCTGTC	1348	False	NA	7	True	AATAAA	-16	NA	31079139	31088590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31079352_31082082_31082200_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
Isoform_143825_25	chr5	+	1390	9	FSM	ENSMUSG00000006638.16	ENSMUST00000201125.4	1352	9	5	-43	5	43	multi-exon	FALSE	canonical	3	60	junction_5	7.48331477354788	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACTATGTGTCTGGA	NA	False	NA	62	True	NA	NA	NA	31107414	31112478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111610_31111748_31111798_31111877_31112044_31112159
Isoform_143826_6	chr5	+	833	7	FSM	ENSMUSG00000013622.16	ENSMUST00000200942.2	840	7	6	1	6	0	multi-exon	FALSE	canonical	3	17	junction_2	101.141402666432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAATGCTGCCGTACCTG	938	False	NA	6	True	AATAAA	-19	NA	31206008	31211961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31206101_31206805_31206828_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
Isoform_143827_173	chr5	+	935	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	30	1	6	-1	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTACCTGTGCGT	938	False	NA	11	True	AATAAA	-24	NA	31206008	31211966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
Isoform_143829_16	chr5	+	1280	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	-317	3	-3	2	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGCCGTACCTGTGC	591	False	NA	9	True	AATAAA	-22	NA	31205661	31211964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
Isoform_14383_78	chr11	-	4787	23	FSM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	-45	1	-45	-1	multi-exon	TRUE	canonical	3	35	junction_12	13.4016928744404	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCTGATGGCTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	74787931	74740087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
Isoform_143831_4	chr5	+	871	7	FSM	ENSMUSG00000013622.16	ENSMUST00000201136.2	894	7	249	-226	249	1	multi-exon	FALSE	canonical	3	6	junction_1	108.191830663051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGCCGTACCTGTG	1307	False	NA	8	True	AATAAA	-21	NA	31206377	31211963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31206409_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
Isoform_143835_56	chr5	+	7172	45	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	3	63	junction_35	184.37253850437	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7069	False	NA	18	True	AATAAA	-14	NA	31212139	31235823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
Isoform_143837_506	chr5	+	7121	44	FSM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	16	0	-15	0	multi-exon	FALSE	canonical	3	481	junction_6	136.90610173497	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7069	False	NA	18	True	AATAAA	-14	NA	31212139	31235823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
Isoform_14385_5	chr11	-	4454	20	NIC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	-53	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	22.17695142519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74787939	74740089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74758436_74758572_74759402_74759565_74759840_74760004_74782821_74782898_74787650
Isoform_14386_12	chr11	-	2820	9	NNC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	2629	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	18.6681547025945	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCTCTGATGGCTATT	7955	False	NA	-5	True	AATAAA	-17	NA	74748772	74740088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748732
Isoform_14387_3	chr11	-	3368	17	ISM	ENSMUSG00000038351.15	ENSMUST00000081799.6	4873	24	-39	7302	-39	-1	5prime_fragment	FALSE	canonical	3	24	junction_5	18.096529363389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74787925	74747393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
Isoform_14389_5	chr11	-	3167	9	NIC	ENSMUSG00000001323.18	novel	3699	9	NA	NA	-3	2	intron_retention	FALSE	canonical	3	5	junction_8	27.485223302713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTATTTGGGGGTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	74816489	74797616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816409
Isoform_14391_5	chr11	-	1794	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	94	1811	-1	-1351	multi-exon	FALSE	canonical	3	15	junction_8	25.2140833662459	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCCACAGTCTCCGATA	NA	False	NA	NA	False	AATAAA	-26	NA	74816530	74798995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
Isoform_143928_12	chr5	+	1542	6	FSM	ENSMUSG00000053856.8	ENSMUST00000066544.5	1565	6	22	1	22	-1	multi-exon	FALSE	canonical	3	10	junction_2	5.93295878967653	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCAGTGTGTGTGGGACC	NA	False	NA	4	True	AATAAA	-16	NA	31265684	31269869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31265766_31266230_31266347_31266838_31267053_31267521_31267664_31268456_31268524_31268947
Isoform_143929_5	chr5	+	1326	5	FSM	ENSMUSG00000053856.8	ENSMUST00000202760.4	670	5	26	-682	24	-1	multi-exon	FALSE	canonical	3	9	junction_2	6.86931583201704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCAGTGTGTGTGGGACC	NA	False	NA	4	True	AATAAA	-16	NA	31265686	31269869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31265766_31266230_31266347_31267521_31267664_31268456_31268524_31268947
Isoform_14393_4	chr11	-	1161	7	NNC	ENSMUSG00000001323.18	novel	3699	9	NA	NA	-7	1323	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.8623032023193	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGTCTCTTACTCCAT	NA	False	NA	NA	False	NA	NA	NA	74816493	74799243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_74799652_74801071_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
Isoform_143930_11	chr5	+	2032	5	NIC	ENSMUSG00000053856.8	novel	1565	6	NA	NA	22	-3	intron_retention	FALSE	canonical	3	16	junction_4	4.32290411644765	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCCAGTGTGTGTGGGA	NA	False	NA	2	True	AATAAA	-14	NA	31265684	31269867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31265766_31266230_31267053_31267521_31267664_31268456_31268524_31268947
Isoform_143931_3	chr5	+	2502	4	NIC	ENSMUSG00000053856.8	novel	1565	6	NA	NA	24	0	intron_retention	FALSE	canonical	3	16	junction_3	4.98887651569859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGTGTGTGTGGGACCC	NA	False	NA	5	True	AATAAA	-17	NA	31265686	31269870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31265766_31266230_31267664_31268456_31268524_31268947
Isoform_143932_20	chr5	+	1530	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	-98	2	-98	-2	multi-exon	FALSE	canonical	2	14	junction_1	4.29389100932942	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCTCGGCTCCTTTTGCT	NA	False	NA	4	True	AATAAA	-17	NA	31273957	31294970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
Isoform_143934_4	chr5	+	1600	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	-167	1	-167	-1	multi-exon	TRUE	canonical	2	14	junction_1	4.29389100932942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCGGCTCCTTTTGCTG	NA	False	NA	5	True	AATAAA	-18	NA	31273888	31294971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
Isoform_143937_16	chr5	+	2042	14	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	55	1	-12	0	intron_retention	FALSE	canonical	3	351	junction_8	24.9475188791361	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350625	31356243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579
Isoform_143938_1171	chr5	+	1942	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	76	0	-3	0	multi-exon	FALSE	canonical	3	351	junction_8	24.4791664857432	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	21	True	ATTAAA	-21	NA	31350646	31356244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
Isoform_143939_49	chr5	+	2040	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	-22	0	-22	0	multi-exon	TRUE	canonical	3	351	junction_8	24.4791664857432	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	21	True	ATTAAA	-21	NA	31350548	31356244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
Isoform_143940_266	chr5	+	2017	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	1	0	1	0	multi-exon	FALSE	canonical	3	351	junction_8	24.4791664857432	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	21	True	ATTAAA	-21	NA	31350571	31356244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
Isoform_143948_14	chr5	+	2238	17	ISM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	36	6	-3	0	intron_retention	FALSE	canonical	3	461	junction_13	30.1161812818292	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398243	31408904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235
Isoform_143949_870	chr5	+	2158	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	40	5	1	1	multi-exon	FALSE	canonical	3	461	junction_13	30.9676692663879	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTTGTGTTGTGCTT	NA	False	NA	28	True	AATAAA	-16	NA	31398247	31408905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
Isoform_143954_33	chr5	+	939	7	FSM	ENSMUSG00000029149.15	ENSMUST00000201937.4	889	7	-50	0	-16	0	multi-exon	FALSE	canonical	3	67	junction_1	11.9361728465293	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409018	31410541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
Isoform_143955_19	chr5	+	946	7	FSM	ENSMUSG00000029149.15	ENSMUST00000054829.13	904	7	-38	-4	-23	-1	multi-exon	FALSE	canonical	3	42	junction_6	21.1344899788631	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATTACAGTTACTT	NA	False	NA	8	True	AATAAA	-20	NA	31409011	31410545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410441
Isoform_143957_3	chr5	+	1011	6	NIC	ENSMUSG00000029149.15	novel	889	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	67	junction_1	12.63962024746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTGATTACAGTTAC	NA	False	NA	6	True	AATAAA	-18	NA	31409031	31410543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31410134_31410238_31410347_31410437
Isoform_143958_6	chr5	+	1052	6	FSM	ENSMUSG00000029149.15	ENSMUST00000201333.4	1027	6	-25	0	-25	0	multi-exon	FALSE	canonical	3	82	junction_3	7.52063827078527	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409009	31410541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
Isoform_143959_3	chr5	+	998	6	NIC	ENSMUSG00000029149.15	novel	904	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_5	22.1124399377364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409059	31410541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410441
Isoform_14396_12	chr11	-	2905	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	284	-6	-4	0	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTTATTTGGGGGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	74816490	74797618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
Isoform_143960_5	chr5	+	1103	5	NIC	ENSMUSG00000029149.15	novel	1027	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	89	junction_4	5.61248608016091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTGATTACAGTTAC	NA	False	NA	6	True	AATAAA	-18	NA	31409043	31410543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31409448_31409535_31409596_31409708_31410134_31410238_31410347_31410437
Isoform_143961_7	chr5	+	1083	5	NIC	ENSMUSG00000029149.15	novel	904	7	NA	NA	-1	1	intron_retention	FALSE	canonical	3	42	junction_4	24.701973605362	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTGATTACAGTTA	NA	False	NA	5	True	AATAAA	-17	NA	31409058	31410542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31409448_31409535_31409596_31409708_31410134_31410238_31410347_31410441
Isoform_143962_3	chr5	+	1289	3	FSM	ENSMUSG00000029149.15	ENSMUST00000201565.2	522	3	-764	-3	0	1	multi-exon	FALSE	canonical	3	89	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGATTACAGTTACT	NA	False	NA	7	True	AATAAA	-19	NA	31409059	31410544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31410134_31410238_31410347_31410437
Isoform_143963_3	chr5	+	1404	2	FSM	ENSMUSG00000029149.15	ENSMUST00000201672.2	548	2	-856	0	-7	0	multi-exon	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409042	31410541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31410347_31410441
Isoform_143965_479	chr5	+	3294	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	3	2	3	-2	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGTCCTCCTTGC	7149	False	NA	14	True	AATAAA	-15	NA	31609781	31639096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
Isoform_143970_201	chr5	+	3235	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	77.4128093764563	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGTCCTCCTTGC	7149	False	NA	14	True	AATAAA	-15	NA	31609781	31639096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
Isoform_143973_42	chr5	+	3228	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	92.8146300728261	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7149	False	NA	13	True	AATAAA	-14	NA	31609781	31639095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31609922_31622795_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
Isoform_143975_95	chr5	+	3800	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	284	junction_12	29.0684059112677	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGTCCTCCTTGC	7220	False	NA	14	True	AATAAA	-15	NA	31609852	31639096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
Isoform_143976_31	chr5	+	3871	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	-2	intron_retention	FALSE	canonical	3	284	junction_12	29.0684059112677	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGTCCTCCTTGC	7149	False	NA	14	True	AATAAA	-15	NA	31609781	31639096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
Isoform_143984_69	chr5	+	3123	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	22	-1	-4	1	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGGCTAAGATTCATTC	NA	False	NA	NA	False	NA	NA	NA	31652106	31670249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
Isoform_143987_1369	chr5	+	1634	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	21	1489	-5	556	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652105	31668759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
Isoform_14399_3	chr11	-	5733	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	222	-2772	-23	2332	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGACTAACCGAATTC	NA	False	NA	NA	False	AATAAA	-16	NA	74816552	74794852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
Isoform_143994_53	chr5	+	2118	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	556	intron_retention	FALSE	canonical	3	859	junction_7	68.3745302644844	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652096	31668759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
Isoform_144006_5	chr5	+	1495	7	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	-17	1841	0	-9	5prime_fragment	FALSE	canonical	3	90	junction_1	11.13552872566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31684338	31692325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201
Isoform_14401_34	chr11	-	2492	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	17	161	17	-161	multi-exon	FALSE	canonical	3	105	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTCTATTTGCT	1654	False	NA	-19	True	NA	NA	NA	75069644	75066928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75069214_75069437
Isoform_144010_70	chr5	+	2512	14	FSM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	-17	4	0	0	multi-exon	FALSE	canonical	3	47	junction_11	21.8978262140197	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGAGGTGATGATCAT	NA	False	NA	7	True	AGTAAA	-17	NA	31684338	31711382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
Isoform_144011_3	chr5	+	2735	14	FSM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	-236	0	-219	0	multi-exon	FALSE	canonical	3	47	junction_11	21.8978262140197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	NA	False	NA	11	True	AGTAAA	-21	NA	31684119	31711386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
Isoform_144012_45	chr5	+	2509	14	NIC	ENSMUSG00000029141.17	novel	2499	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	26.2556840845094	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGAGGTGATGATCAT	NA	False	NA	7	True	AGTAAA	-17	NA	31684338	31711382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705957_31706026_31708056_31708127_31711082
Isoform_144013_80	chr5	+	2428	13	FSM	ENSMUSG00000029141.17	ENSMUST00000114533.9	2424	13	0	-4	0	-1	multi-exon	FALSE	canonical	3	47	junction_10	19.394300422776	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGTGATGATCATTCC	NA	False	NA	10	True	AGTAAA	-20	NA	31684338	31711385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082
Isoform_144015_31	chr5	+	2408	13	NIC	ENSMUSG00000029141.17	novel	2806	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	26.846270173382	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGAGGTGATGATCAT	NA	False	NA	7	True	AGTAAA	-17	NA	31684352	31711382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705957_31706026_31708056_31708127_31711082
Isoform_144016_3	chr5	+	2171	12	NIC	ENSMUSG00000029141.17	novel	2806	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	32.3993674053131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGAGGTGATGATCAT	NA	False	NA	7	True	AGTAAA	-17	NA	31684348	31711382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31705954_31706026_31708056_31708127_31711082
Isoform_144018_602	chr5	+	416	4	FSM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	60	2	14	0	multi-exon	FALSE	canonical	3	1273	junction_1	440.713814926043	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	17	True	AATAAA	-20	NA	31771342	31779986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31771367_31771946_31771966_31773724_31773832_31779720
Isoform_144019_123	chr5	+	459	4	FSM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	17	2	0	0	multi-exon	FALSE	canonical	3	1273	junction_1	440.713814926043	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	17	True	AATAAA	-20	NA	31771299	31779986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31771367_31771946_31771966_31773724_31773832_31779720
Isoform_14402_71	chr11	-	890	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	24	1756	24	103	multi-exon	FALSE	canonical	3	105	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTTTCTCCTGCTGCC	1661	False	NA	-2	True	AATAAA	-19	NA	75069637	75068523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75069214_75069437
Isoform_144021_53	chr5	+	397	3	NIC	ENSMUSG00000106918.4	novel	478	4	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	1111.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	17	True	AATAAA	-20	NA	31771342	31779986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31771367_31773724_31773832_31779720
Isoform_144025_65	chr5	+	2755	2	FSM	ENSMUSG00000106918.4	ENSMUST00000201620.2	2741	2	-14	0	14	0	multi-exon	FALSE	canonical	3	2333	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	17	True	AATAAA	-20	NA	31771342	31779986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31773832_31779720
Isoform_144031_534	chr5	+	1584	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	290	14	4	-14	multi-exon	FALSE	canonical	3	639	junction_9	56.490326824983	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTCTTTCAAGTCTTT	5842	False	NA	21	True	AATAAA	-17	NA	31855317	32242292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
Isoform_144036_14	chr5	+	1474	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	3	-14	combination_of_known_junctions	FALSE	canonical	1	7	junction_5	219.40148130767	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTCTTTCAAGTCTTT	5877	False	NA	21	True	AATAAA	-17	NA	31855352	32242292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
Isoform_144043_4	chr5	+	2393	4	FSM	ENSMUSG00000029135.11	ENSMUST00000031017.11	6537	4	13	4131	13	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTGGGGAAGCAGATG	NA	False	NA	NA	False	AGTAAA	-14	NA	32293157	32311055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_32294150_32304168_32304421_32307764_32307873_32310014
Isoform_144045_2211	chr5	+	2703	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	489	2770	110	-3	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGTCTGAGTGATTATTC	3184	False	NA	20	True	AGTAAA	-17	NA	32616675	32650097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
Isoform_144046_122	chr5	+	2995	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	198	2769	-111	-2	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTGAGTGATTATTCT	2893	False	NA	21	True	AGTAAA	-18	NA	32616384	32650098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
Isoform_144048_48	chr5	+	3649	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	502	1811	123	956	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTGTCACTGTTTTTG	3197	False	NA	9	True	AATAAA	-18	NA	32616688	32651056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
Isoform_144055_31	chr5	+	2538	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-86	-5	intron_retention	FALSE	canonical	0	0	junction_1	552.155050687757	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACGTCTGAGTGATTAT	2918	False	NA	18	True	AGTAAA	-15	NA	32616409	32650095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_32616752_32640769_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
Isoform_144057_32	chr5	+	2268	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	118	-1	intron_retention	FALSE	canonical	0	0	junction_1	552.155050687757	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAGTGATTATTCTG	3192	False	NA	22	True	AGTAAA	-19	NA	32616683	32650099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_32616752_32640769_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
Isoform_14407_403	chr11	-	2039	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	46	54	46	-1	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTTCTCCTGCTGCCC	NA	False	NA	-1	True	AATAAA	-20	NA	75081299	75068522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
Isoform_144079_1026	chr5	+	4133	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	4	-1480	4	0	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768518	32844401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
Isoform_14408_70	chr11	-	3631	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	48	-1540	48	1540	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTCTATTTGCT	NA	False	NA	-19	True	NA	NA	NA	75081297	75066928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
Isoform_144080_28	chr5	+	4990	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	3	-2336	3	856	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGTTTATGCTCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32768517	32845257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
Isoform_144082_28	chr5	+	4232	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	-96	-1479	-96	-1	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768418	32844400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
Isoform_144086_28	chr5	+	3865	11	NIC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	32	junction_1	229.089414858042	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768513	32844401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_32768720_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
Isoform_144091_184	chr5	+	4595	12	FSM	ENSMUSG00000014932.16	ENSMUST00000072311.13	4586	12	-10	1	3	-1	multi-exon	FALSE	canonical	3	102	junction_1	199.348401357942	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768517	32844400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
Isoform_14410_11	chr11	-	3823	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	17	-1701	17	1701	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGTAGGCCCTGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	75081328	75066767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
Isoform_144115_5	chr5	+	5484	44	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	41.165510355563	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2013	False	NA	15	True	AATAAA	-16	NA	33021064	33149013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144116_18	chr5	+	5466	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	36.5368450911651	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2005	False	NA	16	True	AATAAA	-17	NA	33021056	33149014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144117_6	chr5	+	5399	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	9	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	40.7333010454463	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2006	False	NA	16	True	AATAAA	-17	NA	33021057	33149014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144118_3	chr5	+	5277	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	13	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	38.0218478788361	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCTCTCCCTCCC	2004	False	NA	20	True	AATAAA	-21	NA	33021055	33149018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_14412_19	chr11	-	2093	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	62.59526073647	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTTTCTCCTGCTGCC	NA	False	NA	-2	True	AATAAA	-19	NA	75081299	75068523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081169
Isoform_144120_4	chr5	+	5251	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	11	combination_of_known_junctions	FALSE	canonical	3	20	junction_40	35.9017596701367	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2006	False	NA	18	True	AATAAA	-19	NA	33021057	33149016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
Isoform_144121_16	chr5	+	5247	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	49	junction_32	32.536676783431	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2005	False	NA	18	True	AATAAA	-19	NA	33021056	33149016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144122_3	chr5	+	5184	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	12	combination_of_known_junctions	FALSE	canonical	3	20	junction_39	40.380038385321	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCTCTCCCTCC	2008	False	NA	19	True	AATAAA	-20	NA	33021059	33149017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
Isoform_144123_6	chr5	+	5241	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	10	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	34.5219929210486	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTCCCTCTCTCCCT	2006	False	NA	17	True	AATAAA	-18	NA	33021057	33149015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144124_3	chr5	+	5173	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	10	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	39.1091341632617	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTCCCTCTCTCCCT	2008	False	NA	17	True	AATAAA	-18	NA	33021059	33149015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144126_8	chr5	+	5678	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	6	9	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	36.4349068030642	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2019	False	NA	16	True	AATAAA	-17	NA	33021070	33149014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144128_5	chr5	+	5520	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	36.6391197307708	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2029	False	NA	16	True	AATAAA	-17	NA	33021080	33149014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021166_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_14413_7	chr11	-	3686	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	48	1540	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	62.59526073647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTCTATTTGCT	NA	False	NA	-19	True	NA	NA	NA	75081297	75066928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081169
Isoform_144132_5	chr5	+	5305	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	10	combination_of_known_junctions	FALSE	canonical	3	20	junction_40	34.0963571440375	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTCCCTCTCTCCCT	2029	False	NA	17	True	AATAAA	-18	NA	33021080	33149015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
Isoform_144133_10	chr5	+	5304	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	12	combination_of_known_junctions	FALSE	canonical	3	49	junction_32	30.4982031048296	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCTCTCCCTCC	2027	False	NA	19	True	AATAAA	-20	NA	33021078	33149017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144135_10	chr5	+	5295	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	32.6487261900406	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2029	False	NA	16	True	AATAAA	-17	NA	33021080	33149014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144136_3	chr5	+	5246	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	9	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	37.4541052489577	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2012	False	NA	16	True	AATAAA	-17	NA	33021063	33149014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144137_5	chr5	+	5378	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	32.8223849973779	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2013	False	NA	16	True	AATAAA	-17	NA	33021064	33149014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021166_33021923_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144138_4	chr5	+	5312	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	9	combination_of_known_junctions	TRUE	canonical	3	59	junction_1	26.9931964217138	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2004	False	NA	16	True	AATAAA	-17	NA	33021055	33149014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_144140_335	chr5	+	1810	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	-46	0	-46	0	multi-exon	FALSE	canonical	3	1727	junction_1	0	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTGGCCTTGATTT	NA	False	NA	9	True	AATAAA	-20	NA	33176113	33185310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33176499_33183885
Isoform_144141_2093	chr5	+	1700	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	62	2	0	-2	multi-exon	FALSE	canonical	3	1727	junction_1	0	2093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGCCTGGCCTTGAT	NA	False	NA	7	True	AATAAA	-45	NA	33176221	33185308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33176499_33183885
Isoform_144144_4	chr5	+	2630	15	FSM	ENSMUSG00000011034.7	ENSMUST00000011178.5	4104	15	-45	1519	-45	-1519	multi-exon	TRUE	canonical	0	0	junction_1	3.0572763655761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGTTCCTGTCATTTT	NA	False	NA	NA	False	TTTAAA	-6	NA	33261517	33318695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33261936_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
Isoform_144145_4	chr5	+	3960	15	FSM	ENSMUSG00000011034.7	ENSMUST00000011178.5	4104	15	-28	172	-28	-172	multi-exon	FALSE	canonical	0	0	junction_1	3.0572763655761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTGCTTTCCCTGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	33261534	33320042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33261936_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
Isoform_144148_1944	chr5	+	2134	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	57	2	1	-2	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	33492909	33530638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
Isoform_144149_62	chr5	+	2173	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	18	2	18	-2	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	33492870	33530638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
Isoform_144162_54	chr5	+	2201	15	FSM	ENSMUSG00000037313.17	ENSMUST00000074849.13	2669	15	463	5	5	-2	multi-exon	FALSE	canonical	3	29	junction_6	250.331341649912	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815934	33829540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
Isoform_144163_99	chr5	+	2381	14	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	0	2	0	-2	intron_retention	FALSE	canonical	3	792	junction_7	85.2006333837612	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815929	33829540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
Isoform_144165_1518	chr5	+	2186	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-1	2	-1	-2	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815928	33829540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
Isoform_144166_44	chr5	+	2668	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-483	2	-25	-2	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815446	33829540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
Isoform_144171_36	chr5	+	2119	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_13	250.045261208968	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815934	33829540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829069_33829130_33829325
Isoform_144176_54	chr5	+	2059	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	239.805927059907	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815934	33829540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33816072_33818686_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
Isoform_144181_18	chr5	+	4147	18	FSM	ENSMUSG00000054252.19	ENSMUST00000067150.14	4218	18	68	3	1	1	multi-exon	FALSE	canonical	2	4	junction_16	3.88235294117647	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTCGATTTCTGTT	NA	False	NA	10	True	AATAAA	-17	NA	33879135	33894408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33879273_33879649_33879856_33884990_33885261_33885535_33885590_33887024_33887195_33887279_33887404_33887487_33887679_33889460_33889606_33890065_33890257_33890600_33890747_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892476_33892583_33892757
Isoform_144186_8	chr5	+	8041	11	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	74.4366173331379	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGACTGGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	33978039	34034626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
Isoform_144189_146	chr5	+	4692	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-23	2473	-23	-2	multi-exon	FALSE	canonical	3	189	junction_2	30.2485912519455	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	33978045	34052837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144190_13	chr5	+	7164	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-22	0	-22	0	multi-exon	FALSE	canonical	3	189	junction_2	30.2485912519455	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTTACACTTATTTAA	NA	False	NA	12	True	ATTAAA	-15	NA	33978046	34055310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144192_84	chr5	+	4993	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-323	2472	-323	-1	multi-exon	FALSE	canonical	3	189	junction_2	30.2485912519455	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCATGTGAAATGCTTT	NA	False	NA	41	True	ATTAAA	-18	NA	33977745	34052838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144195_12	chr5	+	7486	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-329	-15	-329	6	multi-exon	TRUE	canonical	3	189	junction_2	30.2485912519455	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATGTAACTGTGTCT	NA	False	NA	27	True	ATTAAA	-30	NA	33977739	34055325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144198_29	chr5	+	4689	23	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-23	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	54.8431459815812	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	33978045	34052837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144203_15	chr5	+	4992	23	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-326	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	54.8431459815812	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	33977742	34052837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144206_42	chr5	+	4621	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-22	-2	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	51.8276841421399	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	33978046	34052837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144208_7	chr5	+	7142	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-69	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	51.8276841421399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTACACTTATTTAAT	NA	False	NA	13	True	ATTAAA	-16	NA	33977999	34055311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144209_10	chr5	+	4923	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-324	-2	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	51.8276841421399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	33977744	34052837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144211_13	chr5	+	4616	22	NIC	ENSMUSG00000057406.17	novel	7153	22	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	69.2052388144502	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	33978048	34052837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
Isoform_144221_3	chr5	+	386	4	FSM	ENSMUSG00000070858.13	ENSMUST00000094869.12	477	4	86	5	9	-1	multi-exon	FALSE	canonical	3	9	junction_1	12.3648246606609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTGTCCTGTATTTT	NA	False	NA	4	True	AATAAA	-12	NA	34140862	34142352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34140909_34141100_34141241_34141395_34141485_34142241
Isoform_144222_10	chr5	+	490	4	FSM	ENSMUSG00000070858.13	ENSMUST00000114383.8	511	4	21	0	-19	0	multi-exon	FALSE	canonical	3	25	junction_1	4.98887651569859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCCTGTATTTTG	NA	False	NA	5	True	AATAAA	-13	NA	34140834	34142353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34140984_34141100_34141241_34141395_34141485_34142241
Isoform_144225_646	chr5	+	2863	8	FSM	ENSMUSG00000029110.14	ENSMUST00000030992.13	2895	8	31	1	-6	-1	multi-exon	FALSE	canonical	0	0	junction_4	1003.41470052242	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCTTTCATTTATTCAG	NA	False	NA	24	True	AATAAA	-14	NA	34493754	34510779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
Isoform_144235_4226	chr5	+	2919	8	FSM	ENSMUSG00000029110.14	ENSMUST00000182709.8	3046	8	122	5	-6	-2	multi-exon	FALSE	canonical	0	0	junction_4	927.964241042219	4226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493754	34510778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
Isoform_144267_51	chr5	+	5516	21	FSM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	18	2	18	-2	multi-exon	FALSE	canonical	3	34	junction_1	17.141980632354	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCCAGTCTGGTTGCTT	1461	False	NA	14	True	ATTAAA	-45	NA	34527294	34643798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
Isoform_144270_4	chr5	+	5294	20	NIC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	21.9758114318594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTCTGGTTGCTTT	1441	False	NA	15	True	AATACA	-14	NA	34527274	34643799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
Isoform_144271_28	chr5	+	5516	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	17.252536045463	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1466	False	NA	16	True	AATACA	-15	NA	34527299	34643800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
Isoform_144272_5	chr5	+	5299	20	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	22.0603553864935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1440	False	NA	16	True	AATACA	-15	NA	34527273	34643800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
Isoform_144273_5	chr5	+	5299	20	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7436537036046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCCAGTCTGGTTGCTT	1438	False	NA	14	True	ATTAAA	-45	NA	34527271	34643798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_34527772_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
Isoform_144287_46	chr5	+	3933	16	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	159.558752676108	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGGGGGCAACTTTG	NA	False	NA	23	True	AATAAA	-24	NA	34731128	34789649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34787813
Isoform_144290_17	chr5	+	5814	14	ISM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	101	11	0	3	intron_retention	FALSE	canonical	3	470	junction_10	26.6866542450135	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	15	True	AATAAA	-16	NA	34731108	34789641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758
Isoform_144291_18	chr5	+	5729	14	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	-23	11	-13	3	intron_retention	FALSE	canonical	3	470	junction_10	26.6866542450135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	15	True	AATAAA	-16	NA	34731193	34789641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758
Isoform_144293_18	chr5	+	3943	16	FSM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	63	1	-38	-1	multi-exon	FALSE	canonical	3	43	junction_14	162.471932618803	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGGGGGCAACTTTGCA	NA	False	NA	25	True	AATAAA	-26	NA	34731070	34789651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479_34786517_34787813
Isoform_144294_96	chr5	+	3805	16	FSM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	191	11	-8	3	multi-exon	FALSE	canonical	3	43	junction_14	162.471932618803	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	15	True	AATAAA	-16	NA	34731198	34789641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479_34786517_34787813
Isoform_144298_909	chr5	+	3874	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	-114	1	-6	-1	multi-exon	FALSE	canonical	3	389	junction_14	43.2925501438664	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGGGGGCAACTTTGCA	NA	False	NA	25	True	AATAAA	-26	NA	34731102	34789651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
Isoform_144299_147	chr5	+	3912	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	-152	1	-44	-1	multi-exon	FALSE	canonical	3	389	junction_14	43.2925501438664	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGGGGGCAACTTTGCA	NA	False	NA	25	True	AATAAA	-26	NA	34731064	34789651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
Isoform_144306_26	chr5	+	3943	15	NIC	ENSMUSG00000029106.15	novel	3898	16	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	135.779157427923	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGGGGGCAACTTTGCA	NA	False	NA	25	True	AATAAA	-26	NA	34731126	34789651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774252_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
Isoform_144319_22	chr5	+	10063	67	FSM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	15	3137	-2	-3137	multi-exon	FALSE	canonical	3	38	junction_2	19.3734266519568	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCCTATGCCCGTGTA	1571	False	NA	13	True	AGTAAA	-19	NA	34919102	35066741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
Isoform_144325_11	chr5	+	5308	17	FSM	ENSMUSG00000029101.17	ENSMUST00000030984.14	5472	17	16	148	13	5	multi-exon	FALSE	canonical	2	8	junction_15	4.70206071845101	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGGCTGGAAACTCCT	8647	False	NA	17	True	AATAAA	-17	NA	35106804	35190791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
Isoform_144326_11	chr5	+	5159	16	NIC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	7	4	intron_retention	TRUE	canonical	2	7	junction_15	4.72534537244516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACTGGCTGGAAACTCC	8641	False	NA	16	True	AATAAA	-16	NA	35106798	35190790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35189214
Isoform_144327_5	chr5	+	2806	7	FSM	ENSMUSG00000044716.13	ENSMUST00000114270.8	2779	7	-28	1	-28	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.10554159678513	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGCCTTGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	35214177	35238307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_35214333_35214435_35214482_35221677_35221909_35223793_35223995_35232646_35232767_35234491_35234612_35236374
Isoform_144329_3	chr5	+	1807	2	FSM	ENSMUSG00000067438.6	ENSMUST00000087674.6	1526	2	-282	1	-273	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTCGCAGCTGTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35546178	35550233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_35546834_35549081
Isoform_144330_48	chr5	+	3923	19	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	12.8490764427681	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTTTCTCCCCTGT	NA	False	NA	23	True	AATAAA	-14	NA	35740431	35771144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35740479_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
Isoform_144332_57	chr5	+	3950	19	FSM	ENSMUSG00000029098.18	ENSMUST00000068947.14	3976	19	25	1	-13	-1	multi-exon	FALSE	canonical	3	46	junction_8	8.72982683351794	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTTTCTCCCCTGT	NA	False	NA	23	True	AATAAA	-14	NA	35740408	35771144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
Isoform_144333_18	chr5	+	4110	19	FSM	ENSMUSG00000029098.18	ENSMUST00000114237.8	2956	19	38	-1192	-3	-2	multi-exon	FALSE	canonical	3	8	junction_1	14.5314686197546	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTTTCTCCCCTG	NA	False	NA	22	True	AATAAA	-13	NA	35740432	35771143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
Isoform_144335_3	chr5	+	2792	20	NIC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-21	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	30.378133993561	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGACATATATGCAGAG	1536	False	NA	20	True	ATTAAA	-22	NA	35915246	36041474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_144336_3	chr5	+	2697	19	NIC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	14	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	30.2267153522783	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATATGAAGACATATATG	1527	False	NA	15	True	ATTAAA	-17	NA	35915237	36041469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_144337_4	chr5	+	2576	17	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-22	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	29.9660615321734	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACATATATGCAGA	1535	False	NA	19	True	ATTAAA	-21	NA	35915245	36041473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_144338_7	chr5	+	4079	11	ISM	ENSMUSG00000029095.18	ENSMUST00000114205.8	2579	18	-22	39989	-22	956	5prime_fragment	FALSE	canonical	3	68	junction_5	9.50789145920377	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAGGAGAAGAAGAAG	1535	False	NA	NA	False	NA	NA	NA	35915245	36001504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624
Isoform_144339_3	chr5	+	2680	18	NIC	ENSMUSG00000029095.18	novel	2953	19	NA	NA	-22	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	31.4529362259207	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCAGAGTTTAGTT	1535	False	NA	27	True	ATTAAA	-29	NA	35915245	36041481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36006859_36006914_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_144340_20	chr5	+	1944	15	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-22	9	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	19.8329760443437	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCTAAGAATGTGAAT	1535	False	NA	14	True	AAAACA	-17	NA	35915245	36015539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169
Isoform_144341_12	chr5	+	2735	19	NIC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-22	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	27.4896725838165	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACATATATGCAGA	1535	False	NA	19	True	ATTAAA	-21	NA	35915245	36041473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_144342_3	chr5	+	2982	19	NIC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-21	-88	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	27.4896725838165	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTTCCCTCTGTCATT	1536	False	NA	NA	False	AATACA	-17	NA	35915246	36041721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_144343_4	chr5	+	2953	17	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	26.2413676282316	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTAGTCTCACATCAAC	1535	False	NA	NA	False	AATAAA	-14	NA	35915245	36041808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_144344_8	chr5	+	2616	17	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-22	-22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	26.2413676282316	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATGAAGACATATATGCA	1535	False	NA	17	True	ATTAAA	-19	NA	35915245	36041471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_144345_21	chr5	+	1870	14	NIC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	-4	8	combination_of_known_junctions	FALSE	canonical	3	41	junction_11	15.4395174220198	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCCTAAGAATGTGAA	1509	False	NA	13	True	AAAACA	-16	NA	35915219	36015538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169
Isoform_144346_22	chr5	+	2644	18	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	14	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	26.7032908822983	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACATATATGCAGA	1527	False	NA	19	True	ATTAAA	-21	NA	35915237	36041473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_144347_6	chr5	+	2972	18	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	26.7032908822983	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTCTCACATCAACCT	1536	False	NA	NA	False	AATAAA	-16	NA	35915246	36041810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_144348_16	chr5	+	2554	16	NIC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	-2	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	24.7246166131381	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCAGAGTTTAGTTTTA	1511	False	NA	30	True	ATTAAA	-32	NA	35915221	36041484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_144349_3	chr5	+	3353	16	NIC	ENSMUSG00000029095.18	novel	2953	19	NA	NA	-14	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	24.7246166131381	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTGCGAAAGGACAAAAT	1543	False	NA	NA	False	AATAAA	-15	NA	35915253	36042315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_144350_9	chr5	+	1738	13	NIC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	20	2	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	18.719234018042	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCCAAACAGCCTAAGAA	1533	False	NA	7	True	AAAACA	-10	NA	35915243	36015532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169
Isoform_144351_19	chr5	+	2570	17	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	28.6552787458088	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGAGTTTAGTTTTAC	1511	False	NA	31	True	ATTAAA	-33	NA	35915221	36041485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_144352_4	chr5	+	2867	17	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	28.6552787458088	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTAGTCTCACATCAACC	1538	False	NA	NA	False	AATAAA	-15	NA	35915248	36041809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_144354_5	chr5	+	2754	15	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	27.0672820043321	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTCTCACATCAACCT	1535	False	NA	NA	False	AATAAA	-16	NA	35915245	36041810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_144356_19	chr5	+	6561	17	FSM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	54	3	54	-3	multi-exon	FALSE	canonical	3	11	junction_3	3.8155725323993	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGTCTGAGTCGTCAC	2059	False	NA	12	True	NA	NA	NA	36050716	36161264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_36050885_36092895_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
Isoform_144357_3	chr5	+	6615	17	FSM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	1	2	1	-2	multi-exon	FALSE	canonical	3	11	junction_3	3.8155725323993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTCTGAGTCGTCACT	2006	False	NA	13	True	NA	NA	NA	36050663	36161265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_36050885_36092895_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
Isoform_144360_22	chr5	+	3358	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	168	2	168	-2	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGCTTAAGCACAGC	NA	False	NA	NA	False	AATAAA	-31	NA	36622509	36631422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
Isoform_144361_2091	chr5	+	975	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	170	2383	170	-2383	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTGCACAGTCTACC	NA	False	NA	15	True	AATAAA	-16	NA	36622511	36629041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
Isoform_144369_173	chr5	+	4122	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	-36	2	-36	-2	multi-exon	TRUE	canonical	3	174	junction_3	14.0890028036054	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37025820	37112420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
Isoform_144370_314	chr5	+	4089	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	-2	1	-2	-1	multi-exon	FALSE	canonical	3	174	junction_3	14.0890028036054	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGGCTCGCAAGGCTG	NA	False	NA	8	True	AATAAA	-20	NA	37025854	37112421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
Isoform_14438_3419	chr11	-	2879	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	16	2182	2	2	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	3419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTGACTGTAAAGGA	NA	False	NA	-14	True	AATAAA	-23	NA	75239134	75191173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
Isoform_144383_7	chr5	+	1441	3	FSM	ENSMUSG00000063646.19	ENSMUST00000173836.8	849	3	-30	-562	-30	-20	multi-exon	FALSE	canonical	3	99	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	37185648	37249353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_37185944_37242579_37242843_37248470
Isoform_144387_262	chr5	+	2529	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	26.6327909832138	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	NA	False	NA	17	True	AATAAA	-20	NA	37185678	37282643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_14439_137	chr11	-	2918	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	-23	2182	-23	2	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTGACTGTAAAGGA	NA	False	NA	-14	True	AATAAA	-23	NA	75239173	75191173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
Isoform_144392_6	chr5	+	487	2	NNC	ENSMUSG00000063646.19	novel	849	3	NA	NA	77	-45912	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTGCTGAGTGCAGTC	NA	False	NA	10	True	ATTAAA	-24	NA	37185755	37196742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_37185944_37196443
Isoform_144393_6	chr5	+	567	2	NNC	ENSMUSG00000063646.19	novel	849	3	NA	NA	1	-45908	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGAGTGCAGTCCCTG	NA	False	NA	14	True	ATTAAA	-28	NA	37185679	37196746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_37185944_37196443
Isoform_144394_7	chr5	+	2373	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	48.6269101310055	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	NA	False	NA	15	True	AATAAA	-18	NA	37204778	37282641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_37204890_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_144398_6	chr5	+	1426	6	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5710	40477	0	2649	internal_fragment	FALSE	canonical	3	147	junction_1	12.1556571192182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTTAAAAAAAAAAAAAA	2480	False	NA	NA	False	AATGAA	-35	NA	37248423	37264868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602
Isoform_144399_69	chr5	+	2048	11	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5710	22702	0	0	internal_fragment	FALSE	canonical	3	147	junction_1	11.74265728019	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	2480	False	NA	17	True	AATAAA	-20	NA	37248423	37282643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_14440_163	chr11	-	2963	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	16	2098	2	86	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATTACAGACTCAGAGAT	NA	False	NA	2	True	AATAAA	-24	NA	75239134	75191089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
Isoform_144405_4	chr5	+	2837	14	FSM	ENSMUSG00000029121.17	ENSMUST00000031004.11	2906	14	98	-29	17	-3	multi-exon	FALSE	canonical	1	2	junction_4	2.40069023605034	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGAGTGGGTGTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	37403205	37449474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_37403441_37422575_37422665_37426026_37426212_37430690_37430856_37433620_37433683_37435428_37435510_37436206_37436276_37437002_37437124_37437810_37437968_37440195_37440338_37441371_37441543_37443711_37443892_37446148_37446315_37448460
Isoform_144406_11	chr5	+	2908	12	FSM	ENSMUSG00000050248.12	ENSMUST00000101258.5	2796	12	-111	-1	-2	1	multi-exon	FALSE	canonical	3	19	junction_8	6.81029847284656	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAGCCTGCAATCCTA	8840	False	NA	NA	False	NA	NA	NA	37495840	37545109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028
Isoform_144407_27	chr5	+	4077	20	FSM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	13	1	13	-1	multi-exon	FALSE	canonical	3	11	junction_14	7.49034466215639	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATAAGAGTGGACCTCA	8855	False	NA	2	True	CATAAA	-18	NA	37495855	37582398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
Isoform_144409_6	chr5	+	4085	20	NNC	ENSMUSG00000050248.12	novel	4091	20	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_15	8.17163528730315	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATAAGAGTGGACCTCA	8838	False	NA	2	True	CATAAA	-18	NA	37495838	37582398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573079_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
Isoform_144410_4	chr5	+	1702	9	NNC	ENSMUSG00000050248.12	novel	2796	12	NA	NA	11	-15381	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	11.0227038425243	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGACTCCCAATAGCAT	8853	False	NA	NA	False	NA	NA	NA	37495853	37529727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37529263
Isoform_144411_3	chr5	+	1631	9	NNC	ENSMUSG00000050248.12	novel	2796	12	NA	NA	-11	-15474	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	11.0227038425243	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTACCAGTCGAGTT	8831	False	NA	NA	False	NA	NA	NA	37495831	37529634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37529263
Isoform_144412_10	chr5	+	2529	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	476	-3	-15	3	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGTGGACTTAGATAT	NA	False	NA	NA	False	CATAAA	-16	NA	38196561	38295112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
Isoform_144413_157	chr5	+	1533	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	521	948	12	0	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTGCAGTCAGTGAG	NA	False	NA	13	True	AATAAA	-13	NA	38196606	38294161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
Isoform_144415_12	chr5	+	1455	11	FSM	ENSMUSG00000029125.15	ENSMUST00000031008.13	1471	11	18	-2	0	2	multi-exon	FALSE	canonical	1	3	junction_10	31.04834939252	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTGCAGTCAGTGAGTC	NA	False	NA	15	True	AATAAA	-15	NA	38196594	38294163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293698
Isoform_144416_3	chr5	+	1495	10	FSM	ENSMUSG00000029125.15	ENSMUST00000154929.5	900	10	-48	-547	2	2	multi-exon	FALSE	canonical	1	3	junction_1	32.4550971857016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTGCAGTCAGTGAGTC	NA	False	NA	15	True	AATAAA	-15	NA	38196578	38294163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38196844_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
Isoform_144421_74	chr5	+	1610	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	190	junction_2	843.03156656333	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATCTATGATAACA	NA	False	NA	15	True	AATAAA	-16	NA	38377852	38391642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_38377980_38380477_38380572_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
Isoform_144422_95	chr5	+	1588	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	190	junction_2	843.03156656333	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATCTATGATAACA	NA	False	NA	15	True	AATAAA	-16	NA	38377874	38391642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_38377980_38380477_38380572_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
Isoform_144425_88	chr5	+	1592	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	182	junction_2	844.746612604142	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATCTATGATAACA	NA	False	NA	15	True	AATAAA	-16	NA	38377874	38391642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_38377980_38380477_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
Isoform_144435_959	chr5	+	1502	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	61	0	2	0	multi-exon	FALSE	canonical	3	2026	junction_5	151.553981719386	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377874	38391650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
Isoform_144447_17	chr5	+	729	5	FSM	ENSMUSG00000067365.12	ENSMUST00000119047.8	726	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	18	junction_4	95.0167748347627	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTTTTTATACTATTTA	NA	False	NA	11	True	NA	NA	NA	38417724	38425251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38425041
Isoform_144448_3	chr5	+	928	5	FSM	ENSMUSG00000067365.12	ENSMUST00000119047.8	726	5	-193	-9	6	9	multi-exon	FALSE	canonical	3	18	junction_4	95.0167748347627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTATTTAGAGAATTTA	NA	False	NA	20	True	NA	NA	NA	38417534	38425260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38425041
Isoform_144449_146	chr5	+	1087	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	196	8	-3	-8	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCATTTGGTTAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	38417724	38426970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
Isoform_144451_15	chr5	+	1284	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	-1	8	-1	-8	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCATTTGGTTAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	38417527	38426970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
Isoform_144452_4	chr5	+	3295	4	NIC	ENSMUSG00000067365.12	novel	1291	5	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	200	junction_3	21.9241115365405	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCATTTGGTTAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	38417724	38426970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_38417837_38419340_38419483_38422155_38424629_38426402
Isoform_144454_10	chr5	+	2938	6	FSM	ENSMUSG00000051596.16	ENSMUST00000114099.6	3141	6	184	19	184	-19	multi-exon	FALSE	canonical	1	3	junction_5	1.93907194296653	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATAAAGCTTTCA	NA	False	NA	NA	False	NA	NA	NA	38434931	38461532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_38435169_38445240_38445378_38451832_38451892_38455200_38455332_38456966_38457875_38460066
Isoform_144455_3	chr5	+	7038	11	FSM	ENSMUSG00000039782.16	ENSMUST00000114065.9	7116	11	75	3	75	-2	multi-exon	TRUE	canonical	2	6	junction_3	4.68614980554399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCTGTGTAATCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	43390587	43447064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_43392432_43394649_43394932_43395669_43395760_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
Isoform_144457_3	chr5	+	6251	10	NIC	ENSMUSG00000039782.16	novel	7050	11	NA	NA	18	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_2	4.92160768674447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGTAATCTTATTCT	NA	False	NA	NA	False	AATAAA	-18	NA	43391287	43447067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
Isoform_144460_137	chr5	+	2769	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	309	192	2	-192	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATTTGCTTGGTTTATT	NA	False	NA	15	True	AATAAA	-20	NA	44026203	44069525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
Isoform_144461_121	chr5	+	2800	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	272	198	-35	-198	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAAAGTATTTGCTTGG	NA	False	NA	9	True	AATAAA	-14	NA	44026166	44069519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
Isoform_144463_7	chr5	+	2881	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	196	193	-111	-193	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGCTTGGTTTAT	NA	False	NA	14	True	AATAAA	-19	NA	44026090	44069524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
Isoform_144465_3	chr5	+	2674	7	NIC	ENSMUSG00000029084.6	novel	3270	8	NA	NA	2	-200	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	64.1733762725807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCCAAAGTATTTGCTT	NA	False	NA	7	True	AATAAA	-12	NA	44026203	44069517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44067621
Isoform_144472_856	chr5	+	2193	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	57	17	57	-17	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTTCACTGTGATT	NA	False	NA	18	True	AATAAA	-17	NA	45650772	45670016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
Isoform_144473_2434	chr5	+	1614	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	118	535	-12	-535	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	2434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATGTTGTTCTTTTT	NA	False	NA	14	True	AATGAA	-21	NA	45650833	45669498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
Isoform_144476_325	chr5	+	2217	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	33	17	33	-17	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTTCACTGTGATT	NA	False	NA	18	True	AATAAA	-17	NA	45650748	45670016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
Isoform_144480_798	chr5	+	1699	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	33	535	33	-535	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATGTTGTTCTTTTT	NA	False	NA	14	True	AATGAA	-21	NA	45650748	45669498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
Isoform_144484_67	chr5	+	1768	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	-36	535	-36	-535	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATGTTGTTCTTTTT	NA	False	NA	14	True	AATGAA	-21	NA	45650679	45669498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
Isoform_14449_88	chr11	-	1402	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	169	261	20	34	multi-exon	TRUE	canonical	3	25	junction_1	3.91751691451488	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGCTTCTTCCTTCTC	5547	False	NA	1	True	AATAAA	-15	NA	75313358	75300855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
Isoform_14450_12	chr11	-	1518	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	53	261	53	34	multi-exon	FALSE	canonical	3	25	junction_1	3.91751691451488	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGCTTCTTCCTTCTC	5431	False	NA	1	True	AATAAA	-15	NA	75313474	75300855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
Isoform_14451_8	chr11	-	1579	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	-11	264	-11	31	multi-exon	FALSE	canonical	3	25	junction_1	3.91751691451488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTTGCTTCTTCCTT	5367	False	NA	-2	True	AATAAA	-12	NA	75313538	75300858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
Isoform_14452_4	chr11	-	6884	10	FSM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	16	8	16	-2	multi-exon	TRUE	canonical	2	7	junction_2	4.57043640026736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCTGAGTGAGGCTGTG	2825	False	NA	-8	True	AATAAA	-17	NA	75345527	75331777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75336920_75338689_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
Isoform_144523_79	chr5	+	2178	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	89	2293	15	1346	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTTGTCAATAATGAG	7421	False	NA	NA	False	AATAAA	-15	NA	45677659	45684325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
Isoform_144524_1535	chr5	+	803	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	88	3669	14	2	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTTGTATTCATCTTT	7420	False	NA	31	True	AGTAAA	-20	NA	45677658	45682949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
Isoform_14453_15	chr11	-	5222	6	ISM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	39	6405	39	818	5prime_fragment	FALSE	canonical	2	11	junction_3	4.04969134626332	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTTTGTTTTTGTTA	2848	False	NA	NA	False	NA	NA	NA	75345504	75338174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
Isoform_144535_673	chr5	+	3279	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	2	422	2	-3	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827262	45857466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
Isoform_144536_232	chr5	+	3312	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-31	422	-31	-3	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827229	45857466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
Isoform_144537_15	chr5	+	4327	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-31	-593	-31	593	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATAACCTTTGGTGT	NA	False	NA	-4	True	AATACA	-19	NA	45827229	45858481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
Isoform_14454_4	chr11	-	2123	8	FSM	ENSMUSG00000020847.16	ENSMUST00000066504.11	988	8	0	-1135	0	-3	multi-exon	FALSE	canonical	3	14	junction_1	2.29462548631557	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACTGGGCGCAAGAGTC	NA	False	NA	-13	True	AATAAA	-21	NA	75801888	75721827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75723041_75724227_75724375_75725588_75725703_75745129_75745305_75769774_75769862_75797343_75797474_75799736_75799881_75801775
Isoform_144540_38	chr5	+	4294	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	2	-593	2	593	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATAACCTTTGGTGT	NA	False	NA	-4	True	AATACA	-19	NA	45827262	45858481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
Isoform_14456_31	chr11	-	3484	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	20	8	20	-8	multi-exon	FALSE	canonical	3	32	junction_2	0.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAAGCCCGGGAATGC	7907	False	NA	NA	False	AATAAA	-9	NA	75918588	75910027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75913067_75915773_75915884_75918253
Isoform_144565_3	chr5	+	6688	5	ISM	ENSMUSG00000031558.16	ENSMUST00000173926.8	620	6	-1838	-1370	2	1370	intron_retention	FALSE	canonical	3	152	junction_2	10.8742815854658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACACAAAGAAAAACAA	NA	False	NA	NA	False	AAGAAA	-17	NA	48140497	48331905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496
Isoform_144566_8	chr5	+	3266	6	FSM	ENSMUSG00000031558.16	ENSMUST00000172998.8	3265	6	2	-3	2	3	multi-exon	FALSE	canonical	3	145	junction_5	11.9833217431562	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	48140497	48340502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587
Isoform_144567_97	chr5	+	7744	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.6287548022501	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	16	True	AATAAA	-18	NA	48140497	48462853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
Isoform_144573_61	chr5	+	7719	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	18	2223	2	-1	multi-exon	TRUE	canonical	3	71	junction_14	20.9676913758442	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTCCCACGTTAACCTG	NA	False	NA	15	True	AATAAA	-17	NA	48140497	48462852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
Isoform_144578_4	chr5	+	2670	5	NNC	ENSMUSG00000031558.16	novel	3210	5	NA	NA	1	11976	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	72.0151893700211	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTTTGTATGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	48140496	48159650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48159260
Isoform_14458_145	chr11	-	2742	22	FSM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	18	73	-5	-2	multi-exon	FALSE	canonical	3	37	junction_11	13.2142642642469	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCTTATTTTCTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	76070455	75937124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
Isoform_144582_44	chr5	+	1574	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	42	0	42	0	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	False	NA	13	True	ATTAAA	-21	NA	48529712	48546187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
Isoform_144584_7	chr5	+	1483	8	FSM	ENSMUSG00000029089.9	ENSMUST00000200566.5	1422	8	-62	1	42	0	multi-exon	FALSE	canonical	3	22	junction_4	26.2717354134182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	False	NA	13	True	ATTAAA	-21	NA	48529712	48546187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48536671_48536807_48537465_48537574_48539128_48539210_48545444
Isoform_144585_3	chr5	+	400	2	ISM	ENSMUSG00000097145.6	ENSMUST00000199547.5	437	3	12	1444	5	-1444	5prime_fragment	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	52348025	52350405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_52348280_52350259
Isoform_144587_281	chr5	+	3124	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	14	1	14	-1	multi-exon	FALSE	canonical	3	134	junction_2	14.8099065943487	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCATTGTTCTGTGTAT	NA	False	NA	6	True	AATAAA	-15	NA	52898929	52926681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
Isoform_144589_34	chr5	+	2987	9	NIC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	45.8023948609677	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCATTGTTCTGTGTAT	NA	False	NA	6	True	AATAAA	-15	NA	52898929	52926681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_52899311_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
Isoform_14459_5	chr11	-	2819	22	FSM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	12	2	-1	-2	multi-exon	FALSE	canonical	3	37	junction_11	13.2142642642469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTCCATCCCTGAAGCT	NA	False	NA	66	True	ATTAAA	-14	NA	76070461	75937053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
Isoform_144592_10	chr5	+	4242	5	FSM	ENSMUSG00000029179.15	ENSMUST00000157074.6	4194	5	-19	-29	13	29	multi-exon	FALSE	canonical	3	102	junction_3	7.15454401062709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCCCCCCTTCCCTGTG	NA	False	NA	NA	False	TTTAAA	-34	NA	52940408	52957539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923
Isoform_144594_33	chr5	+	2793	12	FSM	ENSMUSG00000029179.15	ENSMUST00000031077.13	5743	12	14	2936	14	1451	multi-exon	FALSE	canonical	3	82	junction_6	13.7197450763007	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAATTAAATGCATTT	NA	False	NA	NA	False	AATAAA	-6	NA	52940409	52977977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
Isoform_144596_139	chr5	+	2471	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	14	0	14	0	multi-exon	FALSE	canonical	3	81	junction_12	14.4327944472148	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	21	True	ATTAAA	-17	NA	52940409	52982007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
Isoform_144600_4	chr5	+	2402	12	NIC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	31.3840513268436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	21	True	ATTAAA	-17	NA	52940405	52982007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
Isoform_144603_3	chr5	+	2673	11	NIC	ENSMUSG00000029179.15	novel	5743	12	NA	NA	13	1449	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	31.2200256245891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATTAATTAAATGCAT	NA	False	NA	NA	False	AATAAA	-4	NA	52940408	52977975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_52940557_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
Isoform_144604_3	chr5	+	2355	12	NIC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	16	5	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	29.8768823536452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTGTTATTCCTTTTT	NA	False	NA	26	True	ATTAAA	-22	NA	52940411	52982012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_52940557_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
Isoform_144607_583	chr5	+	2677	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	114	1063	0	0	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCATACTCTGTTCCA	NA	False	NA	13	True	AATAAA	-13	NA	52991467	53024076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
Isoform_144608_52	chr5	+	2747	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	43	1064	43	-1	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATACTCTGTTCC	NA	False	NA	12	True	AATAAA	-12	NA	52991396	53024075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
Isoform_144610_7	chr5	+	3005	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	117	732	3	323	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCAGTGTGTGTATG	NA	False	NA	NA	False	TTTAAA	-17	NA	52991470	53024407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
Isoform_144616_95	chr5	+	938	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	318	junction_1	5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3391	False	NA	13	True	ATTAAA	-14	NA	53424463	53435882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53424701_53434484_53434542_53435238
Isoform_144617_540	chr5	+	879	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	43	0	4	0	multi-exon	FALSE	canonical	3	318	junction_1	5	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3450	False	NA	13	True	ATTAAA	-14	NA	53424522	53435882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53424701_53434484_53434542_53435238
Isoform_14462_1145	chr11	-	3423	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	115	2	-32	-2	multi-exon	FALSE	canonical	3	437	junction_1	0	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGCCTTTCTCAGA	NA	False	NA	-3	True	AATAAA	-20	NA	76108375	76101398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76104750_76108303
Isoform_144622_183	chr5	+	5272	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-18	-2	-18	2	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTAGATGTCTTCTGTGG	NA	False	NA	14	True	AATAAA	-20	NA	53713157	53814702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_144623_237	chr5	+	4051	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-14	1215	-14	6	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATTTCAATATATGAT	NA	False	NA	12	True	ATTAAA	-23	NA	53713161	53813485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_144627_36	chr5	+	5305	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-55	2	-55	-2	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGTAGATGTCTTCT	NA	False	NA	10	True	AATAAA	-16	NA	53713120	53814698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_144632_25	chr5	+	3990	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	249	1220	-8	5	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAATTTCAATATATGA	NA	False	NA	11	True	ATTAAA	-22	NA	53747804	53813484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_144639_19	chr5	+	5349	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	109	1	-45	-1	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGATGTCTTCTGTGGG	NA	False	NA	15	True	AATAAA	-21	NA	53747664	53814703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_14464_18	chr11	-	3538	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	0	2	0	-2	multi-exon	FALSE	canonical	3	437	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGCCTTTCTCAGA	NA	False	NA	-3	True	AATAAA	-20	NA	76108490	76101398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76104750_76108303
Isoform_144647_105	chr5	+	5214	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	220	6	220	-2	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGTAGATGTCTTCT	NA	False	NA	10	True	AATAAA	-16	NA	53748032	53814698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_144651_119	chr5	+	4001	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	220	1219	220	6	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATTTCAATATATGAT	NA	False	NA	12	True	ATTAAA	-23	NA	53748032	53813485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_144652_60	chr5	+	5432	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	7	1	7	-1	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGATGTCTTCTGTGGG	NA	False	NA	15	True	AATAAA	-21	NA	53747819	53814703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_144685_33	chr5	+	2018	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	26	229	-1	-2	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTTGTCAGTTTGTA	NA	False	NA	6	True	AATAAA	-16	NA	53966994	54061078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
Isoform_144686_21	chr5	+	2254	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	19	0	-2	0	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGATATCTCTAATAATC	NA	False	NA	NA	False	ATTAAA	-22	NA	53966987	54061307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
Isoform_144687_42	chr5	+	1821	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	18	434	-3	-207	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCTAAGAAGTTTTCAC	NA	False	NA	7	True	AATAAA	-21	NA	53966986	54060873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
Isoform_144688_3	chr5	+	1200	13	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	1	7564	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	24.4369938140244	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATGTATATGTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	53966996	54014840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54014636
Isoform_144689_3	chr5	+	1694	20	NIC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	6	-208	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	20.0605730924564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACCTAAGAAGTTTTCA	NA	False	NA	6	True	AATAAA	-20	NA	53967001	54060872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
Isoform_144690_33	chr5	+	3532	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	46	1356	-20	-233	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGGGTTGTGCTGAT	NA	False	NA	11	True	AATAAA	-13	NA	54155886	54277043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_144691_25	chr5	+	3573	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	4	1357	4	-234	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGGGTTGTGCTGA	NA	False	NA	10	True	AATAAA	-12	NA	54155844	54277042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_144693_10	chr5	+	3831	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	-20	1123	-20	0	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGAATGAGTTTG	NA	False	NA	NA	False	TATAAA	-16	NA	54155820	54277276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_144696_9	chr5	+	3686	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	-111	1359	-111	-236	multi-exon	TRUE	canonical	3	168	junction_8	27.7566163655824	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGTGTGGGGTTGTGCT	NA	False	NA	8	True	AATAAA	-10	NA	54155729	54277040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_144698_3	chr5	+	4909	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	31	-6	31	6	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTTGCTAGTTATTT	NA	False	NA	NA	False	ATTAAA	-20	NA	54155871	54278405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_144699_35	chr5	+	1887	4	FSM	ENSMUSG00000060512.8	ENSMUST00000081747.8	2008	4	116	5	-41	-5	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCACGGTATATGTGT	1901	False	NA	NA	False	ATTAAA	-17	NA	63969821	64056963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_63969939_64033792_64033843_64053772_64053827_64055297
Isoform_144705_60	chr5	+	2367	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	3	-1	3	1	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGGTTTATTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	64250295	64285695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
Isoform_144708_161	chr5	+	2344	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	26	-1	26	1	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGGTTTATTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	64250318	64285695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
Isoform_14471_182	chr11	-	1176	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	26	232	-24	52	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCCAGACTGAGACAACT	NA	False	NA	-20	True	ATTAAA	-17	NA	76134525	76112567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
Isoform_144717_9	chr5	+	5647	20	FSM	ENSMUSG00000029174.19	ENSMUST00000101195.9	5432	20	-220	5	171	0	multi-exon	FALSE	canonical	3	10	junction_1	77.9717968757502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	NA	False	NA	5	True	AATAAA	-15	NA	64317333	64508824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
Isoform_14472_368	chr11	-	1158	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	51	225	1	59	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAGACAACTATATGGA	NA	False	NA	-13	True	ATTAAA	-24	NA	76134500	76112560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
Isoform_144720_554	chr5	+	4814	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-59	5	-59	0	multi-exon	FALSE	canonical	3	216	junction_12	24.8002513925928	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8457	False	NA	5	True	AATAAA	-15	NA	64387682	64508824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
Isoform_144722_7	chr5	+	4807	20	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	77.9609960012501	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	8541	False	NA	4	True	AATAAA	-14	NA	64387766	64508823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_64387874_64391534_64391613_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
Isoform_144746_464	chr5	+	1076	4	FSM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-54	4	-54	-4	multi-exon	FALSE	canonical	3	600	junction_1	49.9266128098699	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGATGTGCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	64960865	64980448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221
Isoform_14476_31	chr11	-	2498	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	52	-1116	2	1116	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGTGAATAGGTAAACT	NA	False	NA	-1	True	NA	NA	NA	76134499	76111219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
Isoform_144760_352	chr5	+	5084	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	137	0	-52	0	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	False	NA	8	True	AATAAA	-16	NA	64960867	64990244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
Isoform_144775_18	chr5	+	941	4	NIC	ENSMUSG00000029178.15	novel	1562	6	NA	NA	-14	-4	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	314.494656375731	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGATGTGCTGTGGA	8277	False	NA	14	True	AATAAA	-14	NA	64969712	64980448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_64969847_64974077_64974174_64979216_64979701_64980221
Isoform_144783_15	chr5	+	2871	14	FSM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	45	22	45	-22	multi-exon	FALSE	canonical	3	10	junction_1	7.03667484678724	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAAATCCGTAAAGG	NA	False	NA	NA	False	AATAAA	-30	NA	65127458	65199207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65127488_65137050_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
Isoform_144784_7	chr5	+	1899	5	ISM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	58	18401	58	-3949	5prime_fragment	FALSE	canonical	3	68	junction_1	10.0591997693654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATATTTAAAGAGGGCA	NA	False	NA	17	True	AATAAA	-14	NA	65264939	65307048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931
Isoform_144786_16	chr5	+	2410	6	ISM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	64	10631	64	3821	5prime_fragment	FALSE	canonical	3	58	junction_5	13.0843417870369	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGCTAGTGTTTAGAAG	NA	False	NA	NA	False	AGTAAA	-12	NA	65264945	65314818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397
Isoform_144787_10	chr5	+	2466	6	ISM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	8	10631	8	3821	5prime_fragment	FALSE	canonical	3	58	junction_5	13.0843417870369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGCTAGTGTTTAGAAG	NA	False	NA	NA	False	AGTAAA	-12	NA	65264889	65314818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397
Isoform_144789_10	chr5	+	3218	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	19	-88	19	6	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACTGACGTGGTTTTTT	NA	False	NA	NA	False	TTTAAA	-22	NA	65264900	65325537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
Isoform_144790_34	chr5	+	3144	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	0	5	0	-5	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAATGTTCTGGTTAA	NA	False	NA	NA	False	TATAAA	-31	NA	65264881	65325444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
Isoform_144791_45	chr5	+	3002	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	18	129	18	-129	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGTCTGAATTGTTTAT	NA	False	NA	3	True	NA	NA	NA	65264899	65325320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
Isoform_144798_17	chr5	+	1211	6	NNC	ENSMUSG00000054920.13	novel	3149	11	NA	NA	14	-3945	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	25.9121593079388	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAAAGAGGGCACTTA	NA	False	NA	21	True	AATAAA	-18	NA	65264895	65307052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65306880
Isoform_14480_3	chr11	-	2747	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	-35	43	-35	-43	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCTGACCTCACCCT	NA	False	NA	NA	False	AATAAA	-13	NA	76290001	76148066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
Isoform_144802_9	chr5	+	3382	26	FSM	ENSMUSG00000037890.14	ENSMUST00000204647.3	3381	26	1	-2	1	2	multi-exon	FALSE	canonical	3	27	junction_5	5.73606136647787	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGCATGCCCCCTATAA	8572	False	NA	NA	False	NA	NA	NA	65357060	65401931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462
Isoform_144803_19	chr5	+	6281	36	FSM	ENSMUSG00000037890.14	ENSMUST00000203653.3	6279	36	2	-4	0	0	multi-exon	FALSE	canonical	3	17	junction_26	8.32581429491851	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAACATTTTCCTGGATTT	8552	False	NA	NA	False	AATAAA	-18	NA	65357040	65417753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446
Isoform_144804_34	chr5	+	4372	37	FSM	ENSMUSG00000037890.14	ENSMUST00000041892.13	4401	37	20	9	1	0	multi-exon	FALSE	canonical	3	17	junction_26	8.39311887467611	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTAACATTTTCCTGG	8572	False	NA	NA	False	AATAAA	-14	NA	65357060	65417749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415572_65417456
Isoform_144805_4	chr5	+	4355	37	NIC	ENSMUSG00000037890.14	novel	4401	37	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_36	9.71646655025489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTTTCCTGGATTTGA	8591	False	NA	NA	False	AATAAA	-20	NA	65357079	65417755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415572_65417460
Isoform_144806_11	chr5	+	2438	4	NIC	ENSMUSG00000029195.11	novel	3540	5	NA	NA	23477	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	56.6058497173413	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	24	True	AAAAAG	-6	NA	65529227	65541350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_65529554_65533022_65533292_65536270_65537415_65540651
Isoform_144808_220	chr5	+	2678	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23579	2	23485	-2	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTGTCTTAGACTT	NA	False	NA	22	True	AAAAAG	-4	NA	65529235	65541348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
Isoform_14481_62	chr11	-	1992	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	1	762	1	-762	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTTACTGTGTGCTTAG	NA	False	NA	-7	True	NA	NA	NA	76289965	76148785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
Isoform_144812_6	chr5	+	3167	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23569	-477	23475	477	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAACCAAAAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	65529225	65541827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
Isoform_144819_181	chr5	+	1600	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	57	11	-10	-11	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATTTTTATTTGCGTG	6943	False	NA	37	True	TATAAA	-37	NA	65548896	65566539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
Isoform_144823_10	chr5	+	2827	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	57	-1216	-10	-270	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATTTGTATGTGTGT	6943	False	NA	NA	False	TTTAAA	-17	NA	65548896	65567766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
Isoform_144830_19	chr5	+	3457	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	88	1348	1	-1289	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTTTTTATATTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	65694663	65754983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
Isoform_144832_91	chr5	+	1606	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	53	3234	-5	-1	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGACATTAATTTTTAAA	NA	False	NA	25	True	AATAAA	-26	NA	65694628	65753097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
Isoform_144838_19	chr5	+	4824	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	71	-2	13	2	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTTATATCTCATTTC	NA	False	NA	14	True	AATAAA	-22	NA	65694646	65756333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
Isoform_144842_7	chr5	+	9191	21	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-17	-4	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	30.7602015598078	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCCAGTGTGAAGAAAT	NA	False	NA	14	True	AATAAA	-12	NA	65921445	65987447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
Isoform_144845_8	chr5	+	9104	20	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	25.0437843732546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	16	True	AATAAA	-14	NA	65921445	65987449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
Isoform_144846_8	chr5	+	9183	20	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	46	-1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	25.0437843732546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921367	65987450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
Isoform_144847_3	chr5	+	9274	20	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	50	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	27.6371422970797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	16	True	AATAAA	-14	NA	65921371	65987449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943352_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
Isoform_14485_35	chr11	-	1724	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111691	-763	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	32.3412922387691	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGCTTACTGTGTGCTTA	1419	False	NA	-8	True	NA	NA	NA	76178203	76148786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178031
Isoform_144852_10	chr5	+	8793	18	FSM	ENSMUSG00000037795.15	ENSMUST00000087264.4	5308	18	-30	-3455	-30	-3	multi-exon	FALSE	canonical	3	26	junction_3	21.723490387184	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCCAGTGTGAAGAAATC	NA	False	NA	15	True	AATAAA	-13	NA	65921432	65987448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
Isoform_144853_4	chr5	+	8863	18	FSM	ENSMUSG00000037795.15	ENSMUST00000087264.4	5308	18	-99	-3456	42	-2	multi-exon	FALSE	canonical	3	26	junction_3	21.723490387184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	16	True	AATAAA	-14	NA	65921363	65987449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
Isoform_14486_6	chr11	-	1781	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111635	-762	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	32.3412922387691	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTTACTGTGTGCTTAG	1363	False	NA	-7	True	NA	NA	NA	76178259	76148785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178031
Isoform_144865_354	chr5	+	1001	10	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	3	377	junction_9	49.0464632318739	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	30	True	AATAAA	-19	NA	66833582	66844574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_66833666_66833778_66833791_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844324_66844347
Isoform_144869_7	chr5	+	971	8	NNC	ENSMUSG00000029223.13	novel	980	7	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	377	junction_7	54.5904977901795	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTGGTTTTTATTTTC	NA	False	NA	29	True	AATAAA	-18	NA	66834220	66844573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844324_66844347
Isoform_14487_3	chr11	-	2441	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111695	-42	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	32.3412922387691	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTCTGACCTCACCCTT	1423	False	NA	NA	False	AATAAA	-14	NA	76178199	76148065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178031
Isoform_144871_4	chr5	+	1105	7	FSM	ENSMUSG00000029223.13	ENSMUST00000176015.5	980	7	-120	-5	-120	0	multi-exon	FALSE	canonical	3	449	junction_2	35.4479273802511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66834114	66844577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
Isoform_144874_82	chr5	+	2424	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	118	3705	-13	1097	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACTGATTTCTAATGA	NA	False	NA	13	True	AATAAA	-20	NA	67418025	67445099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
Isoform_144878_12	chr5	+	6127	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	118	2	-13	-2	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGGTTTAGAAATGCTA	NA	False	NA	NA	False	AATAAA	-16	NA	67418025	67448802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
Isoform_14488_3	chr11	-	1722	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111634	-755	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	33.6961210145704	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTTAGTTTCTTC	1362	False	NA	0	True	NA	NA	NA	76178260	76148778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178098
Isoform_144880_13	chr5	+	1901	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-28	3449	18	1353	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTACAAGATGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	67418011	67445355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
Isoform_144881_29	chr5	+	1631	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-14	3705	-13	1097	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACTGATTTCTAATGA	NA	False	NA	13	True	AATAAA	-20	NA	67418025	67445099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
Isoform_144884_5	chr5	+	5350	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-29	1	17	-1	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGTTTAGAAATGCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	67418010	67448803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
Isoform_144887_6	chr5	+	2331	7	FSM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	128	3705	37	1097	multi-exon	FALSE	canonical	3	385	junction_4	35.264476932649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACTGATTTCTAATGA	NA	False	NA	13	True	AATAAA	-20	NA	67418275	67445099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
Isoform_144892_15	chr5	+	1037	3	FSM	ENSMUSG00000029221.16	ENSMUST00000159907.3	383	3	-219	-435	0	435	multi-exon	FALSE	canonical	3	16	junction_2	210.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTTTTTTTTTAATT	396	False	NA	NA	False	AATAAA	-12	NA	67464307	67476693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67464541_67473020_67473189_67476057
Isoform_144893_628	chr5	+	3041	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	10	2660	0	-3	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTACGGTAGTTTTCA	396	False	NA	12	True	AATAAA	-15	NA	67464307	67513126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
Isoform_144894_14	chr5	+	3404	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	10	2297	0	360	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCCAGTAACAGTTTCC	396	False	NA	NA	False	AATAAA	-20	NA	67464307	67513489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
Isoform_144898_28	chr5	+	2881	16	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	28	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	109.607096282839	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTGGTGGAAAATCATG	395	False	NA	43	True	ATTAAA	-34	NA	67464306	67513157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
Isoform_144899_19	chr5	+	3034	18	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	108.293143108373	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTTGTTACGGTAGTT	396	False	NA	8	True	AATAAA	-11	NA	67464307	67513122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_67464541_67473020_67473189_67482019_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
Isoform_144903_3	chr5	+	2667	5	FSM	ENSMUSG00000107385.4	ENSMUST00000201973.4	2764	5	24	73	18	-73	multi-exon	TRUE	canonical	3	7	junction_2	4.76969600708473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATATCTAAAGGCTAAT	8050	False	NA	NA	False	AAGAAA	-31	NA	67621263	67628101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_67621362_67623669_67623772_67624135_67624364_67625218_67625348_67625991
Isoform_144905_19	chr5	+	4971	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	13	-1551	13	-1318	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGTGTATGTAGTCTGT	NA	False	NA	15	True	ATTAAA	-30	NA	69714316	69731998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144906_22	chr5	+	3418	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	11	4	11	-4	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCTTGATACTGGATT	NA	False	NA	NA	False	AATACA	-12	NA	69714314	69730443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144907_43	chr5	+	2035	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	25	1373	-2	0	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	False	NA	3	True	AATAAA	-14	NA	69714328	69729074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144909_7	chr5	+	3441	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	-12	4	-4	-4	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCTTGATACTGGATT	NA	False	NA	NA	False	AATACA	-12	NA	69714291	69730443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144910_28	chr5	+	2064	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	-5	1374	3	0	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714298	69729073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144914_4	chr5	+	3803	15	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	13	0	intron_retention	FALSE	canonical	3	69	junction_8	26.4487374799954	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714316	69729073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144915_3	chr5	+	6753	15	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-3	-1317	intron_retention	FALSE	canonical	3	69	junction_8	26.4487374799954	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGTATGTAGTCTGTA	NA	False	NA	16	True	ATTAAA	-31	NA	69714292	69731999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144917_3	chr5	+	4821	16	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-4	-1318	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	33.0987747339518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGTGTATGTAGTCTGT	NA	False	NA	15	True	ATTAAA	-30	NA	69714326	69731998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144918_5	chr5	+	1895	16	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	33.0987747339518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	False	NA	3	True	AATAAA	-14	NA	69714328	69729074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144919_21	chr5	+	3686	14	NIC	ENSMUSG00000029208.17	novel	3091	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	43	junction_8	32.5779901741495	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714293	69729073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144920_4	chr5	+	6575	14	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	13	-1331	intron_retention	FALSE	canonical	3	43	junction_8	32.5779901741495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTGTTTTGACTGCGT	NA	False	NA	2	True	ATTAAA	-17	NA	69714316	69731985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_144923_24	chr5	+	6065	23	FSM	ENSMUSG00000046808.18	ENSMUST00000126664.8	6052	23	-26	13	-26	0	multi-exon	TRUE	canonical	3	78	junction_3	13.360930461982	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACTGGAAACTGTCAT	NA	False	NA	11	True	AATAAA	-16	NA	72360645	72456105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
Isoform_144924_45	chr5	+	6032	23	FSM	ENSMUSG00000046808.18	ENSMUST00000126664.8	6052	23	2	18	2	-4	multi-exon	FALSE	canonical	3	78	junction_3	13.360930461982	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGTTCACTGGAAACT	NA	False	NA	6	True	AATAAA	-11	NA	72360673	72456100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
Isoform_144925_4	chr5	+	5987	23	NIC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	10	junction_18	23.9049426059076	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCACTGGAAACTGTCA	NA	False	NA	10	True	AATAAA	-15	NA	72360673	72456104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439496_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
Isoform_144927_10	chr5	+	1438	6	FSM	ENSMUSG00000067219.10	ENSMUST00000087212.8	4206	6	7	2761	7	694	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2046	False	NA	NA	False	TATAAA	-24	NA	72805144	72825660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_72805277_72816024_72816292_72818098_72818156_72820876_72820968_72824118_72824280_72824930
Isoform_144934_63	chr5	+	4848	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	-4	-11	-4	11	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTTTATTAATTTCT	NA	False	NA	25	True	AATAAA	-44	NA	73071642	73136183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
Isoform_144935_202	chr5	+	4788	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	56	-11	-9	11	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTTTATTAATTTCT	NA	False	NA	25	True	AATAAA	-44	NA	73071702	73136183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
Isoform_144944_11	chr5	+	1559	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTCTTTTTTTTAAA	NA	False	NA	13	True	AATACA	-6	NA	73450142	73471411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
Isoform_144945_139	chr5	+	1428	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450146	73471284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
Isoform_144947_11	chr5	+	3355	7	FSM	ENSMUSG00000029152.14	ENSMUST00000166823.5	3354	7	-5	4	4	-4	multi-exon	FALSE	canonical	3	746	junction_1	115.10683443364	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTCTCGTTGCTTGAAA	NA	False	NA	12	True	AATAAA	-23	NA	73450130	73466704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920
Isoform_144951_703	chr5	+	1375	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	18	130	3	-2	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAACTGTCATTCACATT	NA	False	NA	13	True	AATAAA	-14	NA	73450152	73471282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
Isoform_144953_45	chr5	+	1504	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	18	1	3	-1	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTCTTTTTTTTAAA	NA	False	NA	13	True	AATACA	-6	NA	73450152	73471411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
Isoform_144962_132	chr5	+	4087	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	27	2	-7	-2	multi-exon	FALSE	canonical	3	110	junction_1	17.7721692542019	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTGTGGGGTCTTT	NA	False	NA	13	True	AATAAA	-24	NA	73648402	73718131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
Isoform_144963_3	chr5	+	3955	10	FSM	ENSMUSG00000051674.16	ENSMUST00000113558.8	4023	10	60	8	18	-4	multi-exon	FALSE	canonical	3	10	junction_8	47.4083911934961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGATTTGTGGGGTCT	NA	False	NA	11	True	AATAAA	-22	NA	73648427	73718129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73714596_73714700_73714974
Isoform_144964_15	chr5	+	4127	12	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	50.51094309059	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGGTCTTTGTACTC	NA	False	NA	19	True	AATAAA	-30	NA	73648447	73718137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
Isoform_144965_17	chr5	+	4418	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-43	-3	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	44.337907032245	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGATTTGTGGGGTCTT	NA	False	NA	12	True	AATAAA	-23	NA	73649955	73718130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_73650420_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
Isoform_144966_54	chr5	+	4055	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8199	-2	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.4034881952397	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTGTGGGGTCTTT	8143	False	NA	13	True	AATAAA	-24	NA	73660011	73718131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
Isoform_144969_3	chr5	+	3987	10	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8235	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	55.4677083235522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGGGGTCTTTGTACT	8107	False	NA	18	True	AATAAA	-29	NA	73659975	73718136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73712701_73712807_73714596_73714700_73714974
Isoform_144970_9	chr5	+	4136	12	NNC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8203	-4	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	55.4682546392734	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGATTTGTGGGGTCT	8139	False	NA	11	True	AATAAA	-22	NA	73660007	73718129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
Isoform_144971_25	chr5	+	311	2	FSM	ENSMUSG00000106943.3	ENSMUST00000117249.2	1036	2	36	689	36	-689	multi-exon	FALSE	canonical	3	72	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACCAAAAGCTTCATT	NA	False	NA	NA	False	NA	NA	NA	74253779	74254308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74253801_74254018
Isoform_144972_7	chr5	+	1045	2	FSM	ENSMUSG00000106943.3	ENSMUST00000117249.2	1036	2	-10	1	-4	-1	multi-exon	FALSE	canonical	3	72	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTTCACTTGTTC	NA	False	NA	17	True	AATAAA	-19	NA	74253733	74254996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74253801_74254018
Isoform_144973_25	chr5	+	588	3	FSM	ENSMUSG00000106943.3	ENSMUST00000120364.2	575	3	-15	2	2	-1	multi-exon	FALSE	canonical	3	72	junction_1	23.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTTCACTTGTTC	NA	False	NA	17	True	AATAAA	-19	NA	74253722	74254996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74253801_74254018_74254081_74254548
Isoform_144974_36	chr5	+	533	3	FSM	ENSMUSG00000106943.3	ENSMUST00000120364.2	575	3	42	0	36	0	multi-exon	FALSE	canonical	3	72	junction_1	23.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	19	True	AATAAA	-21	NA	74253779	74254998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74253801_74254018_74254081_74254548
Isoform_144975_12	chr5	+	751	2	NIC	ENSMUSG00000106943.3	novel	575	3	NA	NA	36	0	intron_retention	FALSE	canonical	3	119	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	19	True	AATAAA	-21	NA	74253779	74254998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_74254081_74254548
Isoform_144977_29	chr5	+	1808	4	FSM	ENSMUSG00000049907.9	ENSMUST00000051937.9	1812	4	4	0	4	0	multi-exon	FALSE	canonical	2	8	junction_1	1.4142135623731	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGACTGGGTCTTTATT	NA	False	NA	21	True	AATAAA	-23	NA	74355950	74360142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74356252_74356763_74356821_74357927_74358005_74358769
Isoform_144980_26	chr5	+	2154	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	215.964760499897	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCTTTGTCTTGTA	NA	False	NA	23	True	AATAAA	-24	NA	74696161	74756807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_144981_10	chr5	+	4816	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	-2	intron_retention	FALSE	canonical	3	110	junction_9	215.964760499897	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696141	74759449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_144985_19	chr5	+	2149	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	3	combination_of_known_junctions	TRUE	canonical	3	110	junction_9	229.420784136424	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74696141	74756809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_144987_42	chr5	+	2066	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	206.218767164378	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74696143	74756809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_144993_15	chr5	+	2022	17	NIC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	220.557452478374	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTTTGTCTTGTAATA	NA	False	NA	26	True	AATAAA	-27	NA	74696161	74756810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_144996_87	chr5	+	2094	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	24	2651	-8	4	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTTTGTCTTGTAATA	NA	False	NA	26	True	AATAAA	-27	NA	74696155	74756810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_144997_24	chr5	+	4730	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	27	12	-5	-2	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696158	74759449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_145003_57	chr5	+	2061	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	220	junction_12	176.742209428733	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTTTGTCTTGTAATA	NA	False	NA	26	True	AATAAA	-27	NA	74696161	74756810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_145005_40	chr5	+	4717	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	-2	intron_retention	FALSE	canonical	3	220	junction_12	176.742209428733	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696144	74759449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_145008_196	chr5	+	1983	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	49	2641	-5	4	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTTTGTCTTGTAATA	NA	False	NA	26	True	AATAAA	-27	NA	74696158	74756810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_145013_61	chr5	+	4639	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	32	2	0	-2	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696141	74759449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_145016_36	chr5	+	4612	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	-1	-2642	1	-3	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAATGAAGTTTGGTCA	NA	False	NA	10	True	AATAAA	-19	NA	74696140	74759448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_145017_72	chr5	+	1972	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	0	-3	0	3	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74696141	74756809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_145018_43	chr5	+	2020	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	1	-52	1	52	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCTAAGAAAGTAATGT	NA	False	NA	74	True	AATAAA	-16	NA	74696142	74756858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_145021_46	chr5	+	1667	2	FSM	ENSMUSG00000035946.8	ENSMUST00000040477.4	1665	2	-8	6	-8	-6	multi-exon	FALSE	canonical	3	51	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGTACTTGTCCTTA	NA	False	NA	NA	False	AATAAA	-24	NA	75236253	75238548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_75236999_75237626
Isoform_145025_2162	chr5	+	5159	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	79	3	40	-3	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	2162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	806	False	NA	11	True	NA	NA	NA	75735654	75817379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
Isoform_145030_996	chr5	+	5171	21	FSM	ENSMUSG00000005672.13	ENSMUST00000005815.7	5214	21	40	3	40	-3	multi-exon	FALSE	canonical	3	392	junction_9	204.916348786523	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	806	False	NA	11	True	NA	NA	NA	75735654	75817379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
Isoform_145031_90	chr5	+	5199	21	FSM	ENSMUSG00000005672.13	ENSMUST00000005815.7	5214	21	8	7	8	-7	multi-exon	FALSE	canonical	3	392	junction_9	204.916348786523	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAATAAATTTTTCTGT	774	False	NA	7	True	NA	NA	NA	75735622	75817375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
Isoform_145073_92	chr5	+	1709	7	NNC	ENSMUSG00000029233.16	novel	1747	6	NA	NA	4	-4	at_least_one_novel_splicesite	TRUE	non_canonical	1	14	junction_6	15.7418409201578	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAGCAGTCTCTCTCT	NA	False	NA	36	True	NA	NA	NA	76288156	76303347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369_76302948_76302967
Isoform_145074_7	chr5	+	1603	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	137	7	102	-7	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCACGCCCTGGACTGG	NA	False	NA	8	True	AATAAA	-20	NA	76288254	76303319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
Isoform_145075_3	chr5	+	1632	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	35	80	0	-80	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGATGGAATTCTCTT	NA	False	NA	-65	True	NA	NA	NA	76288152	76303246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
Isoform_145076_29	chr5	+	1476	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	35	236	0	-1	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAATATGAATGTACA	NA	False	NA	NA	False	AATAAA	-31	NA	76288152	76303090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
Isoform_145081_774	chr5	+	1841	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	56	0	-14	0	multi-exon	FALSE	canonical	3	1062	junction_3	75.4808585006821	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	592	False	NA	7	True	AATAAA	-15	NA	76331782	76357092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
Isoform_145088_17	chr5	+	4843	5	NIC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	-32	-1	intron_retention	FALSE	canonical	3	1062	junction_3	79.2665597840603	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTTCCTCGTGTGTT	574	False	NA	6	True	AATAAA	-14	NA	76331764	76357091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76355755_76356356
Isoform_145093_8	chr5	+	2504	17	ISM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	18	3115	1	-24	5prime_fragment	FALSE	canonical	3	86	junction_10	34.8881583599651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCATGGTTTTGAATC	NA	False	NA	NA	False	AATAAA	-16	NA	76677175	76715026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803
Isoform_145094_268	chr5	+	3344	19	FSM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	18	9	1	0	multi-exon	FALSE	canonical	3	86	junction_10	33.5248203611431	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATAATATTCTTA	NA	False	NA	8	True	AATAAA	-18	NA	76677175	76718132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
Isoform_145096_155	chr5	+	3313	18	FSM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	-29	-12	1	5	multi-exon	FALSE	canonical	3	47	junction_10	35.7889816992977	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAGCCTTATAAATCT	NA	False	NA	22	True	AATAAA	-32	NA	76677175	76718146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
Isoform_145102_13	chr5	+	5542	26	FSM	ENSMUSG00000036403.16	ENSMUST00000121979.8	5537	26	-6	1	-3	0	multi-exon	FALSE	canonical	3	24	junction_14	5.86433286913354	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGGAAGGTCTTGTAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	76736541	76794312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
Isoform_145106_3	chr5	+	7003	10	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	1	106	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.2659863237109	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGTGTGATTTTAACA	NA	False	NA	NA	False	AATAAA	-25	NA	76805530	77021283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77018363
Isoform_145107_327	chr5	+	2106	10	FSM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	-53	-191	8	-1	multi-exon	FALSE	canonical	3	185	junction_1	1007.72571224074	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTCGCTGTGTGGT	294	False	NA	14	True	ATTAAA	-17	NA	77099161	77115351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77099249_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
Isoform_14511_265	chr11	-	5236	23	FSM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	157	1	157	0	multi-exon	FALSE	canonical	3	154	junction_22	28.8783427101686	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	6276	False	NA	-2	True	AATAAA	-35	NA	76462204	76307560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
Isoform_145112_168	chr5	+	2055	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	288	2	-141	2	multi-exon	FALSE	canonical	3	123	junction_1	1026.8195172413	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCGCTGTGTGGTCTA	615	False	NA	17	True	ATTAAA	-20	NA	77099482	77115354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
Isoform_145117_4643	chr5	+	2011	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	470	1	0	-1	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	4643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTCGCTGTGTGGT	756	False	NA	14	True	ATTAAA	-17	NA	77099623	77115351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
Isoform_145119_577	chr5	+	2120	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	364	-2	-106	2	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCGCTGTGTGGTCTA	650	False	NA	17	True	ATTAAA	-20	NA	77099517	77115354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
Isoform_14512_9	chr11	-	5390	23	FSM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	3	1	3	0	multi-exon	FALSE	canonical	3	154	junction_22	28.8783427101686	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	6122	False	NA	-2	True	AATAAA	-35	NA	76462358	76307560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
Isoform_145162_347	chr5	+	3590	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	31	4	-7	-4	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTTCGGTATTGGCA	NA	False	NA	24	True	AATAAA	-32	NA	77122560	77147780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
Isoform_14517_70	chr11	-	6245	23	FSM	ENSMUSG00000017631.20	ENSMUST00000238684.2	6271	23	25	1	25	0	multi-exon	FALSE	canonical	3	102	junction_22	37.5075749925023	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	-2	True	AATAAA	-35	NA	76514359	76307560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
Isoform_14518_14	chr11	-	6490	23	FSM	ENSMUSG00000017631.20	ENSMUST00000238684.2	6271	23	-219	0	-219	0	multi-exon	FALSE	canonical	3	102	junction_22	37.5075749925023	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	NA	False	NA	-1	True	AATAAA	-36	NA	76514603	76307559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
Isoform_145180_1151	chr5	+	7037	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-40	7	-40	-7	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATCGGACCTTTGTT	3656	False	NA	7	True	AATAAA	-7	NA	77413297	77434272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
Isoform_145181_34	chr5	+	7076	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-80	8	-80	-8	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATCGGACCTTTGT	3616	False	NA	6	True	AATAAA	-6	NA	77413257	77434271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
Isoform_145194_61	chr5	+	6947	4	FSM	ENSMUSG00000029249.16	ENSMUST00000113449.2	6924	4	-31	8	-31	-8	multi-exon	FALSE	canonical	3	119	junction_1	347.74543690592	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATCGGACCTTTGT	4370	False	NA	6	True	AATAAA	-6	NA	77414011	77434271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549
Isoform_145197_38	chr5	+	7202	4	FSM	ENSMUSG00000029249.16	ENSMUST00000113449.2	6924	4	-285	7	-285	-7	multi-exon	FALSE	canonical	3	119	junction_1	347.74543690592	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATCGGACCTTTGTT	4116	False	NA	7	True	AATAAA	-7	NA	77413757	77434272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549
Isoform_145211_1025	chr5	+	3799	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	346	0	2	0	multi-exon	FALSE	canonical	3	372	junction_9	39.992360381564	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	16	True	AATAAA	-16	NA	77458339	77497171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
Isoform_145212_14	chr5	+	4079	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	66	0	66	0	multi-exon	TRUE	canonical	3	372	junction_9	39.992360381564	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	16	True	AATAAA	-16	NA	77458059	77497171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
Isoform_145224_32	chr5	+	3312	18	NIC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_14	69.4558185225946	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952106	86984516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_145227_52	chr5	+	3310	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	58.4142230393181	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952084	86984516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_145229_6	chr5	+	3400	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	58.4142230393181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86951994	86984516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_14523_47	chr11	-	6158	24	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-217	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_23	55.4650727135133	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	NA	False	NA	-1	True	AATAAA	-36	NA	76514601	76307559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514490
Isoform_145235_47	chr5	+	3304	17	FSM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	-344	0	-1	0	multi-exon	FALSE	canonical	3	72	junction_13	59.5315042645489	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952078	86984516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_145236_6	chr5	+	3366	17	FSM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	-404	-2	-61	0	multi-exon	FALSE	canonical	3	72	junction_13	59.5315042645489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952018	86984518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_145238_72	chr5	+	3281	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	-13	1	-1	1	multi-exon	FALSE	canonical	3	145	junction_1	43.5918122329182	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTATTTCCTTGTC	NA	False	NA	12	True	AATAAA	-20	NA	86952078	86984517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_145239_8	chr5	+	3364	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	-97	2	-85	0	multi-exon	FALSE	canonical	3	145	junction_1	43.5918122329182	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86951994	86984516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_145240_106	chr5	+	3252	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	15	2	15	0	multi-exon	FALSE	canonical	3	145	junction_1	43.5918122329182	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952106	86984516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_145243_13	chr5	+	4610	17	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	68.274234479414	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952106	86984516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_145250_7	chr5	+	1360	7	ISM	ENSMUSG00000029291.12	ENSMUST00000196894.5	3703	13	-69	14397	-69	10621	5prime_fragment	FALSE	canonical	3	106	junction_1	12.4454364683963	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACATATGATATGTATG	NA	False	NA	NA	False	ATTAAA	-23	NA	88712829	88776157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883
Isoform_145254_139	chr5	+	3555	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	-22	3	-22	-3	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTATTGTGTTGGTTGT	NA	False	NA	8	True	AATAAA	-12	NA	88712876	88799248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
Isoform_145259_11	chr5	+	3350	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	-61	247	-61	-247	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATGGTTTAGTTATAG	NA	False	NA	NA	False	AATAAA	-8	NA	88712837	88799004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
Isoform_145267_44	chr5	+	6747	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	25	-4067	25	-2164	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCCTTCGCATTAGT	NA	False	NA	8	True	AATAAA	-19	NA	88868754	88909915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
Isoform_145269_465	chr5	+	2891	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	182	5	182	-5	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTCTGAGACTTTAAAA	NA	False	NA	22	True	AATAAA	-19	NA	88913036	88931135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
Isoform_145270_25	chr5	+	2983	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	90	5	90	-5	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTCTGAGACTTTAAAA	NA	False	NA	22	True	AATAAA	-19	NA	88912944	88931135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
Isoform_145275_5	chr5	+	1255	4	FSM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	30	3783	30	-3783	multi-exon	FALSE	canonical	2	9	junction_1	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCGCGAGCCCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	91665503	91770970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_91665817_91741676_91742361_91760856_91760936_91770791
Isoform_145277_3	chr5	+	4778	4	FSM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	137	153	137	-153	multi-exon	FALSE	canonical	2	9	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTAGCTGTGGTGATT	NA	False	NA	NA	False	ATTAAA	-14	NA	91665610	91774600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_91665817_91741676_91742361_91760856_91760936_91770791
Isoform_145278_4	chr5	+	3579	5	FSM	ENSMUSG00000102644.6	ENSMUST00000191860.2	3151	5	-433	5	-4	-5	multi-exon	FALSE	canonical	2	3	junction_1	9.73075022801428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTGTTGTGGGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	92110758	92119920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_92111382_92111541_92111645_92112954_92113164_92114310_92114434_92117399
Isoform_145280_11	chr5	+	3487	4	FSM	ENSMUSG00000102644.6	ENSMUST00000192174.6	1996	4	-10	-1481	4	0	multi-exon	TRUE	canonical	3	9	junction_1	7.48331477354788	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGGGTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	92110752	92119925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_92111382_92112954_92113164_92114310_92114434_92117399
Isoform_145284_905	chr5	+	3892	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	9	-3	0	0	multi-exon	TRUE	canonical	0	0	junction_12	100.480471444838	905	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285805	92350657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
Isoform_145297_10	chr5	+	6420	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113054.9	6401	10	-17	-2	-17	2	multi-exon	FALSE	canonical	1	6	junction_1	38.4967531098403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGAGATTTTTGCGGG	2163	False	NA	19	True	AATGAA	-24	NA	92957219	93113179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_92957421_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
Isoform_145300_25	chr5	+	6517	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	-69	-13	-69	3	multi-exon	FALSE	canonical	3	62	junction_1	24.0066863114075	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGAGATTTTTGCGGGT	NA	False	NA	20	True	AATGAA	-25	NA	93045782	93113180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_93046080_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
Isoform_145304_3	chr5	+	6735	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	-72	-228	-72	218	multi-exon	FALSE	canonical	3	62	junction_1	24.0066863114075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTGCTATGCTGTG	NA	False	NA	4	True	AATAAA	-16	NA	93045779	93113395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_93046080_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
Isoform_14531_291	chr11	-	4280	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	13	-4	1	4	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGGTTATCTGTTCC	NA	False	NA	NA	False	AATAAA	-20	NA	76654392	76617423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
Isoform_145317_1171	chr5	+	5006	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	227.58602769063	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241297	93322817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197_93321503_93321522
Isoform_145326_24	chr5	+	5141	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	-14	-99	-14	99	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCTGCTCTTTTACT	NA	False	NA	12	True	CATAAA	-17	NA	93241281	93322916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
Isoform_145329_74	chr5	+	5103	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	1	97	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	227.58602769063	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCCTGCTCTTTTA	NA	False	NA	10	True	CATAAA	-15	NA	93241297	93322914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197_93321503_93321522
Isoform_14534_6	chr11	-	4514	10	NNC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	108.658940875101	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTTTGGTTATCTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	76654393	76617425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76646357_76646593_76652060_76652182_76654345
Isoform_14535_5	chr11	-	7005	8	NIC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	229	junction_6	28.0502464611385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCCATGTCTTTGGTT	NA	False	NA	NA	False	AATAAA	-11	NA	76654396	76617432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_76621060_76625394_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
Isoform_145357_70	chr5	+	2471	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	333	6	1	0	multi-exon	FALSE	canonical	3	45	junction_3	8.90998064543581	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATTCCTATTTCAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	93415448	93424084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
Isoform_145359_32	chr5	+	2506	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	297	7	-35	0	multi-exon	FALSE	canonical	3	45	junction_3	8.90998064543581	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTCCTATTTCAGT	NA	False	NA	NA	False	AATAAA	-21	NA	93415412	93424083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
Isoform_145361_7	chr5	+	2624	7	NIC	ENSMUSG00000029385.15	novel	2810	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	45	junction_3	9.41039614232874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATGTATTCCTATTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	93415448	93424081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93419139_93419221_93419321_93421196_93421403_93422732
Isoform_145362_4	chr5	+	2648	7	FSM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	-73	-5	-73	-2	multi-exon	FALSE	canonical	3	45	junction_2	9.62057979310787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTATTTCAGTTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	93416099	93424088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
Isoform_145368_461	chr5	+	1110	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	28	2293	-1	-2293	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCCTCATGTTTTC	NA	False	NA	22	True	TATAAA	-16	NA	96358001	96412275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
Isoform_145369_112	chr5	+	3389	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	43	-1	14	1	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCTTTATTCTATTA	NA	False	NA	NA	False	ATTAAA	-32	NA	96358016	96414569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
Isoform_145376_4	chr5	+	1514	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	81	0	25	0	multi-exon	FALSE	canonical	0	0	junction_1	1.64991582276861	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGCTTCTGTTACTT	NA	False	NA	NA	False	AATACA	-15	NA	96941324	96993825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
Isoform_145377_14	chr5	+	3256	14	FSM	ENSMUSG00000034663.14	ENSMUST00000112974.6	3244	14	-9	-3	-9	3	multi-exon	TRUE	canonical	0	0	junction_13	5.94053371578702	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATGGTATTTTTCC	NA	False	NA	NA	False	ATTAAA	-19	NA	97145538	97217511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257
Isoform_145381_609	chr5	+	1810	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	24	-1	24	1	multi-exon	FALSE	canonical	3	460	junction_1	20.2918702932973	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	16	True	AATAAA	-16	NA	100187867	100216620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
Isoform_145385_12	chr5	+	1463	7	FSM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	-43	0	16	0	multi-exon	FALSE	canonical	3	27	junction_6	172.72618021983	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	False	NA	15	True	AATAAA	-15	NA	100187859	100216619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657_100215801_100216154
Isoform_145386_14	chr5	+	1383	7	FSM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	-33	70	26	-70	multi-exon	FALSE	canonical	3	27	junction_6	172.72618021983	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTTTATTCTGATGCA	NA	False	NA	8	True	TATAAA	-19	NA	100187869	100216549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657_100215801_100216154
Isoform_145389_12	chr5	+	2784	5	NIC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	25	1	intron_retention	FALSE	canonical	3	460	junction_1	20.6518764280634	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	16	True	AATAAA	-16	NA	100187868	100216620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_100188162_100206998_100207101_100208832_100210135_100211617_100211742_100215657
Isoform_14539_51	chr11	-	7949	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-7	4	-7	-4	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTTCTTTGTGTG	NA	False	NA	-10	True	TATAAA	-14	NA	76737851	76669253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
Isoform_145390_1632	chr5	+	1603	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	146	6	-2	-6	multi-exon	FALSE	canonical	3	1193	junction_9	105.134834062424	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTGAGGTGTTCTATT	5419	False	NA	37	True	AATAAA	-39	NA	100666320	100695663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
Isoform_145394_33	chr5	+	1495	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	455.54773007337	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGCAGTACTTGGTT	5419	False	NA	14	True	AATAAA	-16	NA	100666320	100695640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100695169
Isoform_145398_40	chr5	+	1507	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	442.714284273729	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGCAGTACTTGGTT	5412	False	NA	14	True	AATAAA	-16	NA	100666313	100695640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_100666417_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
Isoform_145404_651	chr5	+	498	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	135	5	15	-2	multi-exon	FALSE	canonical	3	1615	junction_5	130.796636042369	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATTTGAGTGGAAATGT	NA	False	NA	46	True	AATAAA	-28	NA	100946627	100952332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
Isoform_145405_17	chr5	+	644	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	-12	6	-12	-3	multi-exon	FALSE	canonical	3	1615	junction_5	130.796636042369	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATTTGAGTGGAAATG	NA	False	NA	45	True	AATAAA	-27	NA	100946480	100952331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
Isoform_145407_17	chr5	+	457	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112898.8	460	5	8	-5	2	-2	multi-exon	FALSE	canonical	3	63	junction_3	755.69086768334	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATTTGAGTGGAAATGT	NA	False	NA	46	True	AATAAA	-28	NA	100946610	100952332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100951835_100951896_100952197
Isoform_14541_3	chr11	-	4812	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-41	3175	-41	-3175	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTCTACCTGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	76737885	76672424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
Isoform_145411_45	chr5	+	2874	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	8	2	8	-2	multi-exon	FALSE	canonical	3	20	junction_3	3.86939558874797	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGTTGCATTATTCT	NA	False	NA	3	True	AATAAA	-14	NA	100994092	101046963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
Isoform_145412_34	chr5	+	2933	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	-51	2	38	-2	multi-exon	FALSE	canonical	3	20	junction_3	3.86939558874797	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGTTGCATTATTCT	NA	False	NA	3	True	AATAAA	-14	NA	100994033	101046963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
Isoform_145415_30	chr5	+	3937	13	FSM	ENSMUSG00000029330.9	ENSMUST00000031273.9	3924	13	-13	0	-13	0	multi-exon	FALSE	canonical	3	31	junction_6	11.4561361529774	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGCTGCTGTTTTCTA	NA	False	NA	10	True	AATAAA	-19	NA	101912982	101971724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101956531_101956615_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
Isoform_145417_11	chr5	+	3971	13	FSM	ENSMUSG00000029330.9	ENSMUST00000031273.9	3924	13	-48	1	-48	-1	multi-exon	FALSE	canonical	3	31	junction_6	11.4561361529774	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCGCTGCTGTTTTCT	NA	False	NA	9	True	AATAAA	-18	NA	101912947	101971723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101956531_101956615_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
Isoform_145420_4	chr5	+	3874	12	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	-36	-3	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	15.7096590806342	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGCGCTGCTGTTTT	NA	False	NA	7	True	AATAAA	-16	NA	101912959	101971721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
Isoform_145421_11	chr5	+	3736	10	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	-58	-6	combination_of_known_splicesites	TRUE	canonical	3	11	junction_6	17.1399468429099	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGACTTTGCGCTGCTGT	NA	False	NA	4	True	AATAAA	-13	NA	101912937	101971718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101962265_101962419_101963714_101963835_101965718_101965823_101969299
Isoform_145425_3	chr5	+	5466	2	ISM	ENSMUSG00000092354.8	ENSMUST00000173965.8	707	4	-15	-2807	11	674	intron_retention	FALSE	canonical	3	40	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101985292	101994950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_101985425_101989616
Isoform_145427_8	chr5	+	3634	3	FSM	ENSMUSG00000092354.8	ENSMUST00000174864.2	787	3	-9	-2838	1	668	multi-exon	FALSE	canonical	3	40	junction_1	52	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTCCGTGCTTGTCAA	NA	False	NA	NA	False	AATAAA	-8	NA	101985308	101994944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_101985425_101989616_101989940_101991749
Isoform_145429_8	chr5	+	5466	2	ISM	ENSMUSG00000092354.8	ENSMUST00000174312.2	619	3	-55	-2752	-55	674	intron_retention	FALSE	canonical	3	132	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101987965	101994950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_101988098_101989616
Isoform_145430_54	chr5	+	900	3	NIC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-53	-2	intron_retention	FALSE	canonical	3	132	junction_1	6	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCAATTTCCTTTGGCT	NA	False	NA	13	True	ATTAAA	-23	NA	101987967	101992196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_101988098_101989616_101989940_101991749
Isoform_145432_13	chr5	+	3654	3	NIC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-53	674	intron_retention	FALSE	canonical	3	132	junction_1	6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101987967	101994950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_101988098_101989616_101989940_101991749
Isoform_145433_34	chr5	+	3418	18	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-285	56869	24	0	5prime_fragment	FALSE	canonical	3	18	junction_6	10.5656622127096	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	AGTAAA	-18	NA	103573081	103689300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
Isoform_145434_3	chr5	+	3783	18	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-310	56529	-1	340	intron_retention	FALSE	canonical	3	18	junction_6	10.5656622127096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCCTCGTGCCAGCAC	NA	False	NA	NA	False	AGTAAA	-17	NA	103573056	103689640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
Isoform_145435_7	chr5	+	6753	41	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-323	15440	-14	-15440	5prime_fragment	FALSE	canonical	2	11	junction_18	12.6273265183094	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAGATAAGTCCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	103573043	103730729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
Isoform_145436_3	chr5	+	8276	48	FSM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-314	-47	-5	47	multi-exon	FALSE	canonical	1	2	junction_41	13.2327768430788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAACCAATTCAGACAT	NA	False	NA	NA	False	AATAAA	-17	NA	103573052	103746216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
Isoform_145437_6	chr5	+	6170	38	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	2	-15440	combination_of_known_splicesites	FALSE	canonical	3	9	junction_17	12.7567567567568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAGATAAGTCCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	103573059	103730729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
Isoform_145438_13	chr5	+	2871	17	NIC	ENSMUSG00000034573.15	novel	3439	18	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	12.8403660383963	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	AGTAAA	-18	NA	103573082	103689300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
Isoform_145446_85	chr5	+	8406	21	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	28.5472853350367	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGTGGCTTTTAT	NA	False	NA	24	True	AATAAA	-21	NA	103840258	104003188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
Isoform_14545_204	chr11	-	1947	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	15	1152	15	-1152	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGAGTTTTTTTGGTT	NA	False	NA	-1	True	AATAAA	-18	NA	76969246	76936269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
Isoform_145451_3	chr5	+	7421	19	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	19	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	71.7179833500808	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	False	NA	18	True	AATAAA	-15	NA	103840258	104003182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_103840470_103863215_103863272_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
Isoform_145452_3	chr5	+	4285	20	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	11	-4073	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	65.4565894081941	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTGTTTTCTTTTCA	NA	False	NA	NA	False	TTTAAA	-29	NA	103840250	103999115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_103840470_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
Isoform_145462_31	chr5	+	1483	8	NIC	ENSMUSG00000029310.14	novel	995	6	NA	NA	29	-11	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	99.0728447730687	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGTGACTTGTGTTT	NA	False	NA	9	True	AATAAA	-12	NA	104194420	104213234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
Isoform_145464_138	chr5	+	1415	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	62	11	-37	-11	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGTGACTTGTGTTT	NA	False	NA	9	True	AATAAA	-12	NA	104194796	104213234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
Isoform_145465_108	chr5	+	1475	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	0	13	0	-13	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGCTGGTGACTTGTGT	NA	False	NA	7	True	AATAAA	-10	NA	104194734	104213232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
Isoform_145471_6331	chr5	+	1404	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	5	1	2	1	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	6331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCTGGTGGTGTCAAT	NA	False	NA	30	True	AATAAA	-17	NA	104582988	104588915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
Isoform_14548_185	chr11	-	3098	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	15	1	15	-1	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGACATCCTGTAAATTT	NA	False	NA	-6	True	AATAAA	-27	NA	76969246	76935118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
Isoform_145481_343	chr5	+	1455	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	2	-1	2	0	multi-exon	FALSE	canonical	3	593	junction_1	2050.93187491822	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
Isoform_145495_11	chr5	+	2185	6	ISM	ENSMUSG00000034462.10	ENSMUST00000130931.2	2282	9	-15	6506	-15	-6506	5prime_fragment	FALSE	canonical	3	61	junction_1	8.79545337091841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCCAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	104607420	104631680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890
Isoform_145496_85	chr5	+	5114	15	FSM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	105	0	-15	0	multi-exon	FALSE	canonical	3	58	junction_14	9.78049913170622	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGTGTTAAAAACACGT	NA	False	NA	9	True	AATAAA	-15	NA	104607420	104653685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
Isoform_145499_14	chr5	+	4945	14	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	20.2464110341392	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGTGTTAAAAACACG	NA	False	NA	8	True	AATAAA	-14	NA	104607420	104653684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
Isoform_145500_8	chr5	+	1583	3	NNC	ENSMUSG00000034462.10	novel	2282	9	NA	NA	-32	-21868	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	29	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTAAGAAACCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	104607403	104616318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_104608092_104614748_104614863_104615537
Isoform_145502_4	chr5	+	1072	3	NNC	ENSMUSG00000034462.10	novel	2282	9	NA	NA	-5	-24903	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTAAACATTCCGCATG	NA	False	NA	NA	False	ATTAAA	-23	NA	104607430	104613283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_104608092_104611758_104611874_104612987
Isoform_145503_9	chr5	+	4543	14	ISM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	7332	1	7212	-1	3prime_fragment	FALSE	canonical	3	58	junction_13	9.50614874201564	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGTGTTAAAAACACG	5234	False	NA	8	True	AATAAA	-14	NA	104614647	104653684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
Isoform_145507_3	chr5	+	4224	2	FSM	ENSMUSG00000097392.5	ENSMUST00000096452.7	5181	2	6	951	6	-951	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAGAAAGAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	104656223	104669298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_104656438_104665288
Isoform_145511_21	chr5	+	6745	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	-29	10	-29	-10	multi-exon	FALSE	canonical	3	31	junction_1	5.11737237261468	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTAGAATCTGATTGGC	3339	False	NA	3	True	AATAAA	-16	NA	105563611	105637930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
Isoform_145512_26	chr5	+	6673	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	52	1	52	-1	multi-exon	FALSE	canonical	3	31	junction_1	5.11737237261468	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTGGCCTTGTTTTT	3420	False	NA	12	True	AATAAA	-25	NA	105563692	105637939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
Isoform_145516_3	chr5	+	3044	5	NIC	ENSMUSG00000054720.13	novel	6976	4	NA	NA	-7	2085	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12.7549010188241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAAAGTTTTATTTG	NA	False	NA	NA	False	AATAAA	-27	NA	105667246	105756823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_105667497_105670495_105670618_105692065_105692137_105727333_105727476_105754364
Isoform_145517_31	chr5	+	2909	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	6	4061	6	2085	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAAAGTTTTATTTG	NA	False	NA	NA	False	AATAAA	-27	NA	105667259	105756823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
Isoform_145518_23	chr5	+	2956	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	-41	4061	-41	2085	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAAAGTTTTATTTG	NA	False	NA	NA	False	AATAAA	-27	NA	105667212	105756823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
Isoform_145519_3	chr5	+	3055	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	-141	4062	-141	2084	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTAAAGTTTTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	105667112	105756822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
Isoform_14552_3	chr11	-	4700	4	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	77	8	77	-8	intron_retention	FALSE	canonical	3	152	junction_1	16.0831174424198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404119	77398932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423
Isoform_145522_202	chr5	+	3401	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	42	480	42	-475	multi-exon	FALSE	canonical	3	145	junction_1	205.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTTTTTTGGTTTTTT	4113	False	NA	21	True	ATTAAA	-21	NA	105847876	105962601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105848121_105880095_105880241_105959589
Isoform_145528_440	chr5	+	3849	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	78	2	1	-2	multi-exon	FALSE	canonical	3	312	junction_1	122	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTAGTGGTTCACAACC	4969	False	NA	17	True	AATAAA	-28	NA	105848732	105963074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105848952_105880095_105880241_105959589
Isoform_14553_127	chr11	-	1377	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	78	8	78	-8	multi-exon	FALSE	canonical	3	152	junction_1	13.984117975602	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404118	77398932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
Isoform_145530_93	chr5	+	3399	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	53	477	-24	-477	multi-exon	FALSE	canonical	3	312	junction_1	122	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCAGTTTTTTGGTTTT	4944	False	NA	19	True	ATTAAA	-19	NA	105848707	105962599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105848952_105880095_105880241_105959589
Isoform_145531_480	chr5	+	3371	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	78	480	1	-480	multi-exon	FALSE	canonical	3	312	junction_1	122	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTGCAGTTTTTTGGT	4969	False	NA	16	True	ATTAAA	-16	NA	105848732	105962596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105848952_105880095_105880241_105959589
Isoform_145532_69	chr5	+	3874	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	53	2	-24	-2	multi-exon	FALSE	canonical	3	312	junction_1	122	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTAGTGGTTCACAACC	4944	False	NA	17	True	AATAAA	-28	NA	105848707	105963074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_105848952_105880095_105880241_105959589
Isoform_14554_16	chr11	-	1466	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	-11	8	-11	-8	multi-exon	FALSE	canonical	3	152	junction_1	13.984117975602	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404207	77398932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
Isoform_145541_41	chr5	+	4261	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	-2	intron_retention	FALSE	canonical	3	13	junction_1	254.10802602218	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTAGTGGTTCACAACC	4969	False	NA	17	True	AATAAA	-28	NA	105848732	105963074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_105848952_105862914_105863327_105880095_105880241_105959589
Isoform_145546_27	chr5	+	4048	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	-2	intron_retention	TRUE	canonical	3	20	junction_1	251.968692940655	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTAGTGGTTCACAACC	4969	False	NA	17	True	AATAAA	-28	NA	105848732	105963074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_105848952_105852690_105852890_105880095_105880241_105959589
Isoform_14555_6	chr11	-	1306	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	81	-7	combination_of_known_splicesites	FALSE	canonical	2	14	junction_5	68.0458668840364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGAGTCGTTGGGAGAT	NA	False	NA	-6	True	ATTAAA	-14	NA	77404115	77398931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403985
Isoform_145558_17	chr5	+	2689	12	FSM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	-28	6	-25	-6	multi-exon	TRUE	canonical	3	25	junction_1	8.12708968677346	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATTTGTGTTCTTTTG	NA	False	NA	NA	False	AATACA	-10	NA	106024405	106063678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
Isoform_145559_3	chr5	+	495	4	ISM	ENSMUSG00000029290.13	ENSMUST00000138615.8	1554	10	-38	23861	-27	3285	5prime_fragment	FALSE	canonical	2	3	junction_3	11.4309521329882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAGACTATTGCTCG	NA	False	NA	NA	False	NA	NA	NA	106024403	106039182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_106024565_106026614_106026660_106034052_106034143_106038983
Isoform_145562_240	chr5	+	2913	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	48	0	-11	0	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112235	107132298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_145563_200	chr5	+	2937	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	26	-2	26	2	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATACTTATTTAAAGA	NA	False	NA	12	True	AATAAA	-17	NA	107112213	107132300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_145564_28	chr5	+	2899	12	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	-11	7	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	76.50290331011	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTATTTAAAGAGTAAT	NA	False	NA	17	True	AATAAA	-22	NA	107112235	107132305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127181_107127311_107130829
Isoform_145566_10	chr5	+	3706	11	FSM	ENSMUSG00000029283.18	ENSMUST00000140378.8	3679	11	-22	-5	-11	5	multi-exon	FALSE	canonical	3	199	junction_7	28.5629130167075	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTTATTTAAAGAGTA	NA	False	NA	15	True	AATAAA	-20	NA	107112235	107132303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_145567_45	chr5	+	2860	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	5	-1	5	0	multi-exon	FALSE	canonical	3	29	junction_7	74.2377262582846	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112192	107132298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_145568_59	chr5	+	2822	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	48	-6	-11	5	multi-exon	FALSE	canonical	3	29	junction_7	74.2377262582846	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTTATTTAAAGAGTA	NA	False	NA	15	True	AATAAA	-20	NA	107112235	107132303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_14557_6	chr11	-	1510	6	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	78	-8	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	63.3782297007419	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404118	77398932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403723_77403985
Isoform_145571_53	chr5	+	4280	10	NIC	ENSMUSG00000029283.18	novel	2864	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	232	junction_7	20.9290394275042	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112235	107132297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_145573_29	chr5	+	3132	12	FSM	ENSMUSG00000029283.18	ENSMUST00000118261.8	3129	12	3	-6	3	5	multi-exon	FALSE	canonical	3	16	junction_1	77.2190187680738	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTTATTTAAAGAGTA	NA	False	NA	15	True	AATAAA	-20	NA	107112429	107132303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_145576_5	chr5	+	5954	17	ISM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-82	613	-82	0	5prime_fragment	FALSE	canonical	2	10	junction_13	5.58142846859117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAAAATGTTATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	107585780	107658074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
Isoform_145578_3	chr5	+	5439	18	FSM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-80	-103	-80	103	multi-exon	FALSE	canonical	2	4	junction_17	6.08645896223428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGATGGAGTCTTTTA	NA	False	NA	13	True	AATACA	-10	NA	107585782	107658790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741_107656989_107658217
Isoform_145579_199	chr5	+	2292	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	-14	-10	0	10	multi-exon	FALSE	canonical	3	138	junction_1	12.1951720866178	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGACATTGCTGACTG	NA	False	NA	36	True	AATAAA	-29	NA	107745586	107809714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
Isoform_14558_32	chr11	-	1455	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	78	-9	intron_retention	FALSE	canonical	3	179	junction_5	7.1386273190299	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCGGAGTCGTTGGGAG	NA	False	NA	-8	True	ATTAAA	-12	NA	77404118	77398933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
Isoform_145581_4	chr5	+	2632	14	NNC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	-9	-931	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	55.2861303856379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTAAATCCATTTGTC	NA	False	NA	NA	False	NA	NA	NA	107745573	107808773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107808047_107808627_107808657
Isoform_145582_3	chr5	+	2175	12	NIC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	-5	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	46.0098803618211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGACATTGCTGACTG	NA	False	NA	36	True	AATAAA	-29	NA	107745634	107809714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107803022_107803177_107809346
Isoform_145587_5914	chr5	+	1048	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	42	955	-28	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	5914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTGTGTTAAGCTG	NA	False	NA	-2	True	AATAAA	-16	NA	108048409	108055916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
Isoform_145588_87	chr5	+	2003	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	42	0	-28	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGCATTCTTAATT	NA	False	NA	24	True	AATAAA	-18	NA	108048409	108056871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
Isoform_145589_109	chr5	+	1085	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	5	955	5	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTGTGTTAAGCTG	NA	False	NA	-2	True	AATAAA	-16	NA	108048372	108055916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
Isoform_14560_6	chr11	-	1660	5	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	77	-7	intron_retention	FALSE	canonical	3	179	junction_4	7.43303437365925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGAGTCGTTGGGAGAT	NA	False	NA	-6	True	ATTAAA	-14	NA	77404119	77398931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403792_77403985
Isoform_14562_4	chr11	-	12464	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	-58	3	-58	-3	multi-exon	FALSE	canonical	3	12	junction_19	12.6460443488519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTGCTCACTTTATT	8093	False	NA	-1	True	AATAAA	-16	NA	77498699	77419990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
Isoform_145632_38	chr5	+	4228	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_4	643.731503725652	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213583	108256866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_145641_119	chr5	+	4080	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	-24	4	1	-4	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213583	108256866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_14567_4	chr11	-	1561	7	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	99.5601437434791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGGTGGTCTTTATTTT	NA	False	NA	-1	True	AATAAA	-23	NA	77775379	77771439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77775238
Isoform_145677_5	chr5	+	1129	4	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-59	94045	-20	8	5prime_fragment	FALSE	canonical	2	80	junction_2	5.90668171555645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCGCAAGAATCTTTGG	1084	False	NA	NA	False	NA	NA	NA	108280720	108287449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779
Isoform_145681_98	chr5	+	4703	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-72	705	-33	-705	multi-exon	FALSE	canonical	2	47	junction_16	11.5130804048336	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATTTATTGATTATTTT	1071	False	NA	NA	False	AGTAAA	-7	NA	108280707	108380789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
Isoform_145682_4	chr5	+	5924	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-94	-494	-55	494	multi-exon	FALSE	canonical	2	47	junction_16	11.5130804048336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGATGTTTTTGTTTGTT	1049	False	NA	NA	False	NA	NA	NA	108280685	108381988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
Isoform_145683_441	chr5	+	3075	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	8	2	8	-2	multi-exon	FALSE	canonical	3	201	junction_1	9	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTTTATATTTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	108416770	108428390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108417676_108423434_108423599_108426384
Isoform_14569_184	chr11	-	1702	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	292	4	292	-4	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATCTGCGGTGGTCTTT	NA	False	NA	-6	True	AATAAA	-18	NA	77784630	77771444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
Isoform_145690_156	chr5	+	4363	13	FSM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	211	-1	184	1	multi-exon	TRUE	canonical	3	51	junction_6	9.64761052742537	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTGTCTGTTTTCTT	NA	False	NA	NA	False	AATAAA	-26	NA	108460685	108497222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
Isoform_145693_4	chr5	+	3023	8	FSM	ENSMUSG00000033623.14	ENSMUST00000112597.8	2169	8	27	-881	27	881	multi-exon	FALSE	canonical	3	120	junction_2	4.29047354790892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTGTTTAAGAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	108609124	108637971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701
Isoform_145698_132	chr5	+	5058	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	27	2623	27	-2623	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCCAGTCTGGCAAT	NA	False	NA	NA	False	AATAAA	-22	NA	108609124	108652219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
Isoform_145703_28	chr5	+	1417	10	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	5	3680	5	-14	5prime_fragment	FALSE	canonical	3	99	junction_1	13.0251418797514	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGCATCTGACACTAC	NA	False	NA	14	True	ATTAAA	-22	NA	108777702	108792968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
Isoform_145704_26	chr5	+	1465	10	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-34	3671	28	-5	5prime_fragment	FALSE	canonical	3	99	junction_1	13.0251418797514	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACACTACACTTTTCCT	NA	False	NA	23	True	ATTAAA	-31	NA	108777663	108792977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
Isoform_145705_63	chr5	+	2447	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-15	1524	-15	-5	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTCTTTTGAACATT	NA	False	NA	NA	False	AATAAA	-20	NA	108777682	108795124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
Isoform_145708_5	chr5	+	2382	10	NIC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	27	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	41.1801222574169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTTCTTTTGAACAT	NA	False	NA	NA	False	AATAAA	-19	NA	108777662	108795123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790904_108791070_108792033_108792113_108792422_108792559_108793704
Isoform_145709_11	chr5	+	1558	10	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-161	1560	16	-5	5prime_fragment	FALSE	canonical	3	25	junction_1	34.906223577529	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACACTACACTTTTCCT	NA	False	NA	23	True	ATTAAA	-31	NA	108777713	108792977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
Isoform_14571_87	chr11	-	1730	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	265	3	265	-3	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTGGTCTTTA	NA	False	NA	-5	True	AATAAA	-19	NA	77784657	77771443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
Isoform_145710_12	chr5	+	2553	11	FSM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-157	-585	20	-7	multi-exon	FALSE	canonical	3	25	junction_1	36.4367945900843	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAATTTCTTTTGAACA	NA	False	NA	NA	False	AATAAA	-18	NA	108777717	108795122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
Isoform_145712_138	chr5	+	3169	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	202	2	-3	-2	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGGCCTCCCAAGTCT	NA	False	NA	15	True	NA	NA	NA	108817173	108832421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
Isoform_145716_3	chr5	+	3370	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	3	0	3	0	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCTCCCAAGTCTTC	NA	False	NA	17	True	NA	NA	NA	108816974	108832423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
Isoform_145717_3	chr5	+	3079	14	NIC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	14.961489025032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCTCCCAAGTCTTC	NA	False	NA	17	True	NA	NA	NA	108817165	108832423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828260_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
Isoform_145718_5	chr5	+	3283	13	NIC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-10	1	intron_retention	FALSE	canonical	2	36	junction_10	7.17441441667696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTCCCAAGTCTTCC	NA	False	NA	18	True	NA	NA	NA	108817150	108832424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
Isoform_145719_72	chr5	+	2650	7	FSM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	-267	-54	5	26	multi-exon	FALSE	canonical	3	66	junction_1	17.0171482138851	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTTTACCTGGG	NA	False	NA	30	True	AAGAAA	-17	NA	108842100	108854816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108842399_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_14572_7	chr11	-	1876	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	119	3	119	-3	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTGGTCTTTA	NA	False	NA	-5	True	AATAAA	-19	NA	77784803	77771443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
Isoform_145721_56	chr5	+	2695	7	FSM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	-312	-54	-40	26	multi-exon	FALSE	canonical	3	66	junction_1	17.0171482138851	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTTTACCTGGG	NA	False	NA	30	True	AAGAAA	-17	NA	108842055	108854816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108842399_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_145723_9	chr5	+	2371	6	FSM	ENSMUSG00000008090.15	ENSMUST00000112560.8	2318	6	-30	-23	8	23	multi-exon	FALSE	canonical	2	5	junction_2	42.3820716813135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGGTGTTTTTACCT	NA	False	NA	27	True	AAGAAA	-14	NA	108842103	108854813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_108842399_108842760_108842985_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_145724_31	chr5	+	2503	7	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	8	25	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	30.2402417685809	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTGTTTTTACCTGG	NA	False	NA	29	True	AAGAAA	-16	NA	108842103	108854815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_145725_20	chr5	+	2551	7	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	-40	25	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	30.2402417685809	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTGTTTTTACCTGG	NA	False	NA	29	True	AAGAAA	-16	NA	108842055	108854815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_145727_13	chr5	+	2449	6	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	-20	24	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	43.0041858427758	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGGTGTTTTTACCTG	NA	False	NA	28	True	AAGAAA	-15	NA	108842075	108854814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_108842399_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_145728_4	chr5	+	2524	6	ISM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	221	-54	221	26	3prime_fragment	FALSE	canonical	3	93	junction_1	8.84081444212014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTTTACCTGGG	NA	False	NA	30	True	AAGAAA	-17	NA	108842588	108854816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_145733_3	chr5	+	468	3	ISM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	234	2989	234	143	5prime_fragment	FALSE	canonical	3	75	junction_1	62	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGGTGTCTCATTTGT	NA	False	NA	NA	False	NA	NA	NA	110071499	110088813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_110071633_110088291_110088419_110088605
Isoform_145736_15	chr5	+	3849	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	244	-1676	244	1676	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	12	True	ATTAAA	-24	NA	110071509	110093478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
Isoform_145739_7	chr5	+	2190	5	FSM	ENSMUSG00000066613.15	ENSMUST00000125213.8	868	5	-23	-1299	-12	-3	multi-exon	FALSE	canonical	3	13	junction_2	94.3514043350707	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATC	8358	False	NA	19	True	NA	NA	NA	110144374	110158274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110144500_110151218_110151319_110154809_110154937_110155121_110155183_110156497
Isoform_14574_30	chr11	-	2060	7	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	274	-4	intron_retention	FALSE	canonical	3	232	junction_1	25.5304828696121	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATCTGCGGTGGTCTTT	NA	False	NA	-6	True	AATAAA	-18	NA	77784648	77771444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_77772081_77772326_77772403_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
Isoform_145741_16	chr5	+	453	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	1	-3	1	3	multi-exon	FALSE	canonical	3	208	junction_1	18.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGGTGTCTGATTTGT	8372	False	NA	NA	False	NA	NA	NA	110144388	110155336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110144500_110154809_110154937_110155121
Isoform_145744_5	chr5	+	3951	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-13	-1857	-13	1857	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATATAGTGTTACTGGG	8357	False	NA	NA	False	ATTAAA	-19	NA	110144373	110160134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
Isoform_145745_73	chr5	+	2087	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-9	3	-9	-3	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATC	8361	False	NA	19	True	NA	NA	NA	110144377	110158274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
Isoform_145746_50	chr5	+	3758	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-9	-1668	-9	1668	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGCTCAGCAATTAATT	8361	False	NA	NA	False	ATTAAA	-23	NA	110144377	110159945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
Isoform_145749_4	chr5	+	3154	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	-14	18	-14	-18	multi-exon	TRUE	canonical	3	28	junction_1	12.7744862910412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTATTTTAACCAGCAA	1935	False	NA	NA	False	NA	NA	NA	110257943	110277642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
Isoform_145750_7	chr5	+	4690	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	202	-1734	-42	1734	multi-exon	FALSE	canonical	3	28	junction_1	12.7744862910412	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGAGAGTCAAGATAT	2151	False	NA	11	True	AATAAA	-25	NA	110258159	110279394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
Isoform_145751_20	chr5	+	3120	5	FSM	ENSMUSG00000023284.16	ENSMUST00000147631.8	748	5	-15	-2357	0	-19	multi-exon	FALSE	canonical	3	14	junction_1	18.0052075800308	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCTATTTTAACCAGCA	2193	False	NA	NA	False	NA	NA	NA	110258201	110277641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112
Isoform_145752_6	chr5	+	4907	5	FSM	ENSMUSG00000023284.16	ENSMUST00000147631.8	748	5	-51	-4108	-36	1732	multi-exon	FALSE	canonical	3	14	junction_1	18.0052075800308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACCTGAGAGTCAAGAT	2157	False	NA	9	True	AATAAA	-23	NA	110258165	110279392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112
Isoform_145754_129	chr5	+	3219	19	FSM	ENSMUSG00000014668.16	ENSMUST00000198066.5	3201	19	-17	-1	1	1	multi-exon	FALSE	canonical	3	66	junction_2	86.3223931292197	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283726	110319836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_145755_37	chr5	+	3198	19	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	66	junction_2	100.199800399003	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283744	110319836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_145759_553	chr5	+	3146	18	FSM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	12	1	1	1	multi-exon	FALSE	canonical	3	248	junction_2	36.3883322871989	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283726	110319836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_14576_20	chr11	-	2574	6	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	302	-3	intron_retention	FALSE	canonical	3	232	junction_1	26.8223787162884	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTGGTCTTTA	NA	False	NA	-5	True	AATAAA	-19	NA	77784620	77771443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_77772081_77772326_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
Isoform_145761_11	chr5	+	3194	18	FSM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	-43	8	-36	-6	multi-exon	FALSE	canonical	3	248	junction_2	36.3883322871989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTCTTCTTGTGTTGTA	NA	False	NA	13	True	AATAAA	-13	NA	110283671	110319829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_145762_171	chr5	+	3143	18	FSM	ENSMUSG00000014668.16	ENSMUST00000014812.13	3146	18	1	2	1	1	multi-exon	FALSE	canonical	3	81	junction_11	67.7699140155478	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283726	110319836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_145763_16	chr5	+	2910	17	FSM	ENSMUSG00000014668.16	ENSMUST00000198633.5	2623	17	22	-309	1	-1	multi-exon	FALSE	canonical	3	10	junction_5	84.7737568104068	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	NA	False	NA	18	True	AATAAA	-18	NA	110283744	110319834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_145765_44	chr5	+	3105	18	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	73.7381038437897	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTTGTACTCCTG	NA	False	NA	19	True	AATAAA	-19	NA	110283744	110319835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_145766_15	chr5	+	3103	18	NIC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	91.8634084559722	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283744	110319836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_145768_20	chr5	+	3039	17	NIC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	81.0771237773023	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	110283734	110319837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110283801_110283916_110284061_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_14577_428	chr11	-	2003	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	11	0	11	0	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	77971198	77964201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
Isoform_145786_40	chr5	+	4637	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	179	3316	1	-47	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCTGGTGGCTTTCTTT	NA	False	NA	33	True	NA	NA	NA	110324745	110371020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_145788_5	chr5	+	4986	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	-171	3317	-171	-48	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTCTGGTGGCTTTCTT	NA	False	NA	32	True	NA	NA	NA	110324395	110371019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_145789_3	chr5	+	7949	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	179	4	1	-4	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTTTCATAATTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	110324745	110374332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_14579_7	chr11	-	2368	9	NIC	ENSMUSG00000020832.15	novel	2014	10	NA	NA	10	-3	intron_retention	FALSE	canonical	3	182	junction_6	15.3133928311136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTATCTTTTATTTC	NA	False	NA	-5	True	AATAAA	-19	NA	77971199	77964204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77969216_77970902
Isoform_145791_30	chr5	+	4756	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	1	48	1	-48	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTCTGGTGGCTTTCTT	NA	False	NA	32	True	NA	NA	NA	110324745	110371019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_145792_3	chr5	+	4871	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	-22	-44	0	44	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGGTAATGGTACATA	NA	False	NA	124	True	ATTAAA	-15	NA	110324722	110371111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_145793_9	chr5	+	5063	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	-304	46	-126	-46	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGTGGCTTTCTTTT	NA	False	NA	34	True	NA	NA	NA	110324440	110371021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_145794_8	chr5	+	8071	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	1	-3267	1	-2	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTTCATAATTCATTG	NA	False	NA	NA	False	AATAAA	-13	NA	110324745	110374334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_145795_6	chr5	+	4762	24	NIC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	1	-49	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	28.0402761906312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTCTGGTGGCTTTCT	NA	False	NA	31	True	NA	NA	NA	110324745	110371018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110324916_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_145797_5	chr5	+	4884	24	NIC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	1	-47	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.7049976560749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCTGGTGGCTTTCTTT	NA	False	NA	33	True	NA	NA	NA	110324745	110371020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110324916_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_145798_3	chr5	+	8197	24	NIC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.7049976560749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTCATAATTCATT	NA	False	NA	NA	False	AATAAA	-12	NA	110324745	110374333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110324916_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_14580_16	chr11	-	2121	9	FSM	ENSMUSG00000020832.15	ENSMUST00000139731.8	2131	9	8	2	8	-2	multi-exon	FALSE	canonical	3	178	junction_7	16.6466025062173	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTATCTTTTATTTCT	NA	False	NA	-4	True	AATAAA	-20	NA	77971201	77964203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_77965001_77965105_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
Isoform_145803_208	chr5	+	3272	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	4	801	4	-801	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAATGTCTGATATTT	NA	False	NA	4	True	AATACA	-14	NA	110378873	110402534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
Isoform_145805_155	chr5	+	5242	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	14	-1179	14	1	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGATGTCTGGGAGATGT	NA	False	NA	16	True	ATTAAA	-18	NA	110378883	110404514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
Isoform_145811_44	chr5	+	3266	13	FSM	ENSMUSG00000029501.15	ENSMUST00000031474.11	5215	13	-30	1979	7	-801	multi-exon	FALSE	canonical	3	39	junction_3	61.1323700396661	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAATGTCTGATATTT	NA	False	NA	4	True	AATACA	-14	NA	110378876	110402534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385523_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
Isoform_145813_26	chr5	+	5222	13	FSM	ENSMUSG00000029501.15	ENSMUST00000031474.11	5215	13	-6	-1	-6	1	multi-exon	FALSE	canonical	3	39	junction_3	61.1323700396661	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGATGTCTGGGAGATGT	NA	False	NA	16	True	ATTAAA	-18	NA	110378900	110404514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385523_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
Isoform_145817_85	chr5	+	727	6	FSM	ENSMUSG00000007080.15	ENSMUST00000112482.2	747	6	19	1	-17	-1	multi-exon	FALSE	canonical	3	245	junction_5	26.0967430918113	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGTGTTCTGTTTTGTG	NA	False	NA	8	True	AATAAA	-14	NA	110434225	110439100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824
Isoform_145819_99	chr5	+	7095	49	FSM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	54	14	-17	7	multi-exon	FALSE	canonical	2	122	junction_13	49.0675377809901	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCCACACAAAGCTCTT	NA	False	NA	34	True	AGTAAA	-25	NA	110434225	110485326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
Isoform_145820_49	chr5	+	7106	49	FSM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	32	25	-3	-2	multi-exon	FALSE	canonical	2	122	junction_13	49.0675377809901	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGTTTTATGCTTCCAC	NA	False	NA	23	True	AGTAAA	-14	NA	110434203	110485315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
Isoform_14583_8	chr11	-	2225	8	NIC	ENSMUSG00000020832.15	novel	2131	9	NA	NA	11	0	intron_retention	FALSE	canonical	3	178	junction_6	17.7580105522975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	77971198	77964201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
Isoform_145839_8	chr5	+	2919	11	FSM	ENSMUSG00000033316.15	ENSMUST00000040001.14	2883	11	-33	-3	-33	1	multi-exon	FALSE	canonical	0	0	junction_4	1.48660687473185	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATACCTGTTGTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	110692187	110769244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110692809_110725305_110725487_110736107_110736275_110737634_110737810_110743931_110744130_110750446_110750565_110761943_110762130_110763262_110763401_110765703_110765800_110767030_110767199_110768373
Isoform_145842_471	chr5	+	2529	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	17	2300	17	325	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAATTCCCGATAGCT	NA	False	NA	5	True	AATAAA	-16	NA	110801333	110806062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
Isoform_145844_10	chr5	+	6068	15	FSM	ENSMUSG00000029504.6_ENSMUSG00000105161.2	ENSMUST00000031478.6	4846	15	18	-1240	18	1240	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTCTTGTTTTCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	110801334	110809602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
Isoform_145849_6	chr5	+	7362	15	FSM	ENSMUSG00000029504.6_ENSMUSG00000105161.2	ENSMUST00000031478.6	4846	15	6	-2522	6	20	multi-exon	TRUE	canonical	3	94	junction_7	18.2382195693885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTATTTTTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	110801322	110810884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
Isoform_145850_7	chr5	+	2680	14	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	17	325	intron_retention	FALSE	canonical	3	94	junction_6	17.8066538989481	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAATTCCCGATAGCT	NA	False	NA	5	True	AATAAA	-16	NA	110801333	110806062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
Isoform_145858_8	chr5	+	1066	6	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-5	-27	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	110.44202098839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGTGTTGGGATAAG	9194	False	NA	NA	False	AATAAA	-16	NA	110987860	110997732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461
Isoform_145860_147	chr5	+	2378	16	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	17	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	67.6591457232502	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTTAGTAGTTTGT	9216	False	NA	20	True	NA	NA	NA	110987882	111022000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
Isoform_145864_24	chr5	+	2307	15	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	3	52	junction_12	80.9591733845031	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTTAGTAGTTTGT	9171	False	NA	20	True	NA	NA	NA	110987837	111022000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
Isoform_145866_10	chr5	+	1741	4	ISM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	6	24281	6	-29	intron_retention	FALSE	canonical	3	120	junction_1	91.2249965744039	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTAGTGTTGGGATA	9205	False	NA	NA	False	AATAAA	-14	NA	110987871	110997730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495
Isoform_145868_304	chr5	+	2248	15	FSM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	17	11	17	1	multi-exon	FALSE	canonical	3	120	junction_1	48.9833895211386	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTTAGTAGTTTGT	9216	False	NA	20	True	NA	NA	NA	110987882	111022000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
Isoform_145872_24	chr5	+	2137	14	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	3	52	junction_11	68.5178679240099	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTTAGTAGTTTGT	9211	False	NA	20	True	NA	NA	NA	110987877	111022000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
Isoform_145873_12	chr5	+	2188	14	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-18	1	combination_of_known_splicesites	TRUE	canonical	3	52	junction_11	68.5178679240099	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTTAGTAGTTTGT	9160	False	NA	20	True	NA	NA	NA	110987826	111022000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
Isoform_145876_8	chr5	+	2053	3	FSM	ENSMUSG00000033209.18	ENSMUST00000143505.2	1557	3	-17	-479	2	479	multi-exon	FALSE	canonical	3	14	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTTCCTCCCTCTTCA	NA	False	NA	NA	False	NA	NA	NA	111027670	111062661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_111027855_111040697_111040977_111061071
Isoform_145878_4	chr5	+	727	3	NNC	ENSMUSG00000033209.18	novel	1557	3	NA	NA	5	29571	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	9.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGGCTTTTAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	111027673	111091753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_111027855_111040697_111040977_111091486
Isoform_14588_1344	chr11	-	2024	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	48	6	-25	-6	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTCCAGCCTGTCTC	NA	False	NA	-5	True	NA	NA	NA	78056367	78050231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
Isoform_145885_1605	chr5	+	2757	11	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	375.1786774325	1605	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478624	111536225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
Isoform_145889_24	chr5	+	2795	11	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	375.1786774325	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478586	111536225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
Isoform_14589_33	chr11	-	4071	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	48	-2041	-25	1140	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATGAGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	78056367	78048184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
Isoform_145892_137	chr5	+	2672	10	NIC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	433.102702158834	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478624	111536225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
Isoform_145915_3	chr5	+	6992	2	FSM	ENSMUSG00000070576.5	ENSMUST00000094463.5	6860	2	-142	10	-62	-10	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGGCATGTTTGTGGG	NA	False	NA	NA	False	AATAAA	-16	NA	111565165	111604889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_111569750_111602481
Isoform_145916_427	chr5	+	1816	7	FSM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	-2	-1	1	1	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112424570	112463222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_145918_39	chr5	+	1893	7	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.99956933606	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112424570	112463222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_112424638_112451765_112451838_112455431_112456421_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_145920_39	chr5	+	901	6	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.943779479539	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112424573	112463222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_112424638_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_145921_151	chr5	+	1839	7	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	-39	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	87.1615677284942	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112436588	112463222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_112436679_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_145923_9	chr5	+	887	6	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	128.790372310977	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112436628	112463222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_112436679_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_145927_247	chr5	+	2870	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	3	687	3	113	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGATGAATAACGTCTC	NA	False	NA	23	True	AATAAA	-15	NA	112474226	112485252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
Isoform_145928_219	chr5	+	3525	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	34	1	-29	-1	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGGAAGTATATGGGTGT	NA	False	NA	13	True	AATAAA	-15	NA	112474257	112485938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
Isoform_145931_13	chr5	+	3288	14	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	25.6563543924319	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490963	112526279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_112490989_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_145932_9	chr5	+	2796	14	NIC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.5195248851138	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490958	112526279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_112490989_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_145935_75	chr5	+	3301	14	FSM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	43	1	26	-1	multi-exon	FALSE	canonical	3	34	junction_1	19.6098031274724	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490991	112526279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_145937_49	chr5	+	2856	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	-21	1	-9	-1	multi-exon	TRUE	canonical	3	24	junction_1	21.6682900317355	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490939	112526279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_145938_76	chr5	+	2804	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	31	1	26	-1	multi-exon	FALSE	canonical	3	24	junction_1	21.6682900317355	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490991	112526279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_145939_10	chr5	+	3616	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	24.7453300836086	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGTGATCAGCTAG	NA	False	NA	7	True	AATAAA	-13	NA	112490977	112526278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_112491030_112491607_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_14594_29	chr11	-	2133	6	NIC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	8	-6	intron_retention	FALSE	canonical	3	463	junction_3	28.6258624324229	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTCCAGCCTGTCTC	NA	False	NA	-5	True	NA	NA	NA	78056407	78050231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052449_78053207_78053260_78056123
Isoform_145942_4	chr5	+	4075	9	FSM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	222	5	-83	2	multi-exon	FALSE	canonical	2	3	junction_1	15.7276627316331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCCAGTTGTGTAT	NA	False	NA	9	True	ATTAAA	-19	NA	113638534	113727781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_113638807_113688483_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
Isoform_145943_88	chr5	+	3221	8	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50752	6	1019	1	3prime_fragment	FALSE	canonical	3	32	junction_6	7.59430506285829	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTGCCCAGTTGTGTA	NA	False	NA	8	True	ATTAAA	-18	NA	113689064	113727780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
Isoform_145944_18	chr5	+	3309	8	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50664	6	931	1	3prime_fragment	FALSE	canonical	3	32	junction_6	7.59430506285829	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTGCCCAGTTGTGTA	NA	False	NA	8	True	ATTAAA	-18	NA	113688976	113727780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
Isoform_145947_150	chr5	+	3144	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	-8	-3	-8	3	multi-exon	FALSE	canonical	3	46	junction_2	4.5	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCGTTGTCTCATCC	707	False	NA	NA	False	AATAAA	-14	NA	113873855	113878664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_113874111_113874881_113875234_113876127
Isoform_145949_10	chr5	+	1468	2	ISM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-2	2212	-2	-1453	intron_retention	FALSE	canonical	3	687	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3648	False	NA	NA	False	GATAAA	-45	NA	113910861	113913647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_113911006_113912323
Isoform_145952_6	chr5	+	1881	4	FSM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-11	-475	-11	0	multi-exon	FALSE	canonical	3	687	junction_1	22.86676384819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3639	False	NA	NA	False	AATAAA	-15	NA	113910852	113916334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831
Isoform_145953_396	chr5	+	888	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	54	15	-1	0	multi-exon	FALSE	canonical	3	687	junction_1	28.9179874818425	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3649	False	NA	NA	False	AATAAA	-15	NA	113910862	113916334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
Isoform_145957_13	chr5	+	1116	5	FSM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	-1	1	-1	-1	multi-exon	FALSE	canonical	3	17	junction_4	304.763330307306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCTGTACTGAACCTG	3649	False	NA	NA	False	AATAAA	-14	NA	113910862	113916333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113915140_113915893
Isoform_145965_38	chr5	+	3394	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	2	1208	2	-1208	multi-exon	FALSE	canonical	3	37	junction_5	7.25095779113966	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGGTGCTTTAGTCCTT	NA	False	NA	14	True	AATAAA	-25	NA	114238377	114261573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_145966_23	chr5	+	2841	13	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	-35	-1795	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	11.3293497901101	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACTCTTCTGGTCTAA	NA	False	NA	15	True	ATTAAA	-17	NA	114238340	114260986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249932_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_145967_15	chr5	+	3383	13	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	2	-1216	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	11.3293497901101	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCAAGTGCGGTGCTT	NA	False	NA	6	True	AATAAA	-17	NA	114238377	114261565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249932_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_145969_7	chr5	+	2576	5	ISM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	19168	1210	8355	-1210	3prime_fragment	FALSE	canonical	3	48	junction_2	4.9180788932265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGCGGTGCTTTAGTCC	9269	False	NA	12	True	AATAAA	-23	NA	114257543	114261571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_14597_64	chr11	-	2784	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	25	0	-16	0	multi-exon	FALSE	canonical	1	11	junction_10	13.5103890486136	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6273	False	NA	0	True	AATAAA	-14	NA	78067476	78056931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_145973_175	chr5	+	1997	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	-14	2	-14	0	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGTGCCGACTATTCTT	NA	False	NA	21	True	AATAAA	-17	NA	114268432	114277382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
Isoform_145974_1153	chr5	+	1950	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	31	4	31	1	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGGTGTGCCGACTATTC	NA	False	NA	19	True	AATAAA	-15	NA	114268477	114277380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
Isoform_145979_354	chr5	+	1893	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	242	1	-61	-1	multi-exon	FALSE	canonical	3	690	junction_3	32.487536071546	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGTGCCGACTATTCT	NA	False	NA	20	True	AATAAA	-16	NA	114269228	114277381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
Isoform_14598_67	chr11	-	2762	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	47	0	-1	0	multi-exon	FALSE	canonical	1	11	junction_10	13.5103890486136	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6295	False	NA	0	True	AATAAA	-14	NA	78067454	78056931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_145981_37	chr5	+	2147	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	-14	3	-14	0	multi-exon	FALSE	canonical	3	690	junction_3	32.487536071546	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCGGTGTGCCGACTATT	NA	False	NA	18	True	AATAAA	-14	NA	114268972	114277379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
Isoform_145991_9	chr5	+	8143	52	NIC	ENSMUSG00000042010.17	novel	676	5	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	13.4690326470011	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGGCCTTGATTTAT	NA	False	NA	8	True	AATAAA	-18	NA	114313972	114388821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_114314252_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
Isoform_145992_44	chr5	+	1611	4	ISM	ENSMUSG00000042010.17	ENSMUST00000143276.2	6680	41	48499	4	-55	0	3prime_fragment	FALSE	canonical	3	58	junction_1	12.0369800568452	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCTTCTGGCCTTGA	5505	False	NA	3	True	AATAAA	-13	NA	114386338	114388816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_114386380_114386644_114386816_114386935_114387073_114387554
Isoform_145994_8	chr5	+	1881	3	NIC	ENSMUSG00000042010.17	novel	6680	41	NA	NA	-55	1	intron_retention	FALSE	canonical	3	80	junction_1	3	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGGCCTTGATTTAT	5505	False	NA	8	True	AATAAA	-18	NA	114386338	114388821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_114386816_114386935_114387073_114387554
Isoform_145995_19	chr5	+	1998	2	NIC	ENSMUSG00000042010.17	novel	6680	41	NA	NA	-52	1	intron_retention	FALSE	canonical	3	86	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGGCCTTGATTTAT	5508	False	NA	8	True	AATAAA	-18	NA	114386341	114388821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_114387073_114387554
Isoform_146_270	ERCC-00116	+	1976	1	FSM	ERCC-00116A	DQ668367	1977	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00116_+_0_2000
Isoform_146000_8	chr5	+	2658	19	ISM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	222	12636	3	-2602	5prime_fragment	TRUE	canonical	3	252	junction_13	25.8968156677302	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGCCATGTTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	114518889	114546594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157
Isoform_146001_626	chr5	+	4967	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	223	4	-3	-3	multi-exon	FALSE	canonical	3	241	junction_19	27.3486858419916	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACGGCTCTGTTCTGGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	114518890	114559226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
Isoform_146006_8	chr5	+	4972	28	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	3	junction_13	59.6632525404348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGCTCTGTTCTGGTTTC	NA	False	NA	18	True	ATTAAA	-18	NA	114518890	114559227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539503_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
Isoform_14601_5	chr11	-	2783	15	NIC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	17.802917669613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6264	False	NA	0	True	AATAAA	-14	NA	78067485	78056931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067395
Isoform_146018_16	chr5	+	1711	12	NIC	ENSMUSG00000041939.15	novel	1660	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	45.2173812847221	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGCCTTGGGCCCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	114582347	114598646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_114582425_114582712_114582751_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
Isoform_146020_15	chr5	+	1710	11	FSM	ENSMUSG00000041939.15	ENSMUST00000112239.9	1602	11	1	-109	1	2	multi-exon	FALSE	canonical	3	9	junction_3	36.3257484437692	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTTGGGCCCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	114582347	114598647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588301_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
Isoform_146021_14	chr5	+	993	7	ISM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-19	7441	1	0	5prime_fragment	FALSE	canonical	3	117	junction_1	10.1063786238637	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGGCTGTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	114582347	114591211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940
Isoform_146023_182	chr5	+	1673	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-19	6	1	1	multi-exon	FALSE	canonical	3	102	junction_10	13.5410487038486	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGCCTTGGGCCCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	114582347	114598646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
Isoform_146025_110	chr5	+	3530	3	FSM	ENSMUSG00000041930.8	ENSMUST00000043650.8	2930	3	-602	2	-602	-2	multi-exon	FALSE	canonical	3	54	junction_1	5	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTCAGCTGTGGG	NA	False	NA	10	True	AAGAAA	-15	NA	114705474	114751279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114706486_114732401_114732529_114748887
Isoform_14603_25	chr11	-	2612	15	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	14.9114734622815	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6295	False	NA	0	True	AATAAA	-14	NA	78067454	78056931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78062065_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_146031_85	chr5	+	2822	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	60	0	1	0	multi-exon	FALSE	canonical	2	32	junction_2	9.3392838174146	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	NA	False	NA	15	True	AGTAAA	-18	NA	114845880	114860388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
Isoform_146032_19	chr5	+	2882	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	9.3392838174146	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	NA	False	NA	15	True	AGTAAA	-18	NA	114845820	114860388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
Isoform_146035_3	chr5	+	3200	12	FSM	ENSMUSG00000002486.16	ENSMUST00000124242.5	3138	12	-60	-2	-15	2	multi-exon	FALSE	canonical	2	32	junction_2	9.39491686019186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTGTCACTGCTGCTT	NA	False	NA	17	True	AGTAAA	-20	NA	114845864	114860390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114858330_114859168
Isoform_146036_4	chr5	+	3290	12	NIC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	53	junction_7	4.96267056871134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGGCTGTCACTGCTG	NA	False	NA	14	True	AGTAAA	-17	NA	114845879	114860387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_114846022_114846714_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
Isoform_146037_152	chr5	+	3441	15	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	45	junction_9	98.811508872774	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGTGAGTTTCATTT	1122	False	NA	26	True	AGTAAA	-16	NA	114913013	114943880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936578_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
Isoform_146039_1318	chr5	+	3438	15	FSM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	276	3	8	-3	multi-exon	FALSE	canonical	3	367	junction_6	30.6590866112599	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGTGAGTTTCATTT	1122	False	NA	26	True	AGTAAA	-16	NA	114913013	114943880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
Isoform_14604_62	chr11	-	2899	14	FSM	ENSMUSG00000017405.15	ENSMUST00000152611.8	2882	14	-17	0	-1	0	multi-exon	FALSE	canonical	3	30	junction_7	9.26148734971841	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6295	False	NA	0	True	AATAAA	-14	NA	78067454	78056931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_14606_6	chr11	-	2997	13	FSM	ENSMUSG00000017405.15	ENSMUST00000131015.8	2561	13	-21	-415	-14	0	multi-exon	FALSE	canonical	3	30	junction_7	9.49085817452189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6275	False	NA	0	True	AATAAA	-14	NA	78067474	78056931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_146064_9	chr5	+	2247	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	-70	4	-46	-1	multi-exon	FALSE	canonical	3	18	junction_2	3.38230690505755	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGTGGTCCTCATTTG	7788	False	NA	2	True	NA	NA	NA	115061252	115075970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
Isoform_146065_28	chr5	+	2093	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	85	3	-73	0	multi-exon	FALSE	canonical	3	18	junction_2	3.38230690505755	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTGGTCCTCATTTGT	7943	False	NA	3	True	NA	NA	NA	115061407	115075971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
Isoform_146067_7	chr5	+	1752	5	ISM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	49	1234	3	765	intron_retention	FALSE	canonical	3	243	junction_3	15.2151240547029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCCTGGTCAGTGCT	NA	False	NA	26	True	AATAAA	-28	NA	115080265	115086608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221
Isoform_146068_327	chr5	+	1330	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	42	1235	-4	764	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCCTGGTCAGTGC	NA	False	NA	25	True	AATAAA	-27	NA	115080258	115086607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
Isoform_146070_20	chr5	+	1810	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	42	755	-4	-755	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGGCCGTAGGCTACA	NA	False	NA	NA	False	AATAAA	-16	NA	115080258	115087087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
Isoform_146073_6	chr5	+	1414	6	NIC	ENSMUSG00000029559.16	novel	2607	6	NA	NA	-9	764	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	103.424175123614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCCTGGTCAGTGC	NA	False	NA	25	True	AATAAA	-27	NA	115080253	115086607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115080415_115083844_115083967_115084076_115084176_115084349_115084424_115085221_115085313_115085740
Isoform_146085_49	chr5	+	3148	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	55	1	46	-1	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1538	False	NA	27	True	AATAAA	-15	NA	115149250	115236848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
Isoform_146086_379	chr5	+	2653	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	10	541	1	-7	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATATTTTTTTGTATTT	1493	False	NA	11	True	AATACA	-9	NA	115149205	115236308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
Isoform_14609_3	chr11	-	3293	13	NIC	ENSMUSG00000017405.15	novel	2882	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	30	junction_6	8.98571397027279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6273	False	NA	0	True	AATAAA	-14	NA	78067476	78056931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_146091_38	chr5	+	3237	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	-34	1	-34	-1	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1449	False	NA	27	True	AATAAA	-15	NA	115149161	115236848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
Isoform_14610_5	chr11	-	1373	3	ISM	ENSMUSG00000017405.15	ENSMUST00000142812.8	2876	4	-26	1607	-6	-411	5prime_fragment	FALSE	canonical	3	45	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTAAT	6283	False	NA	NA	False	NA	NA	NA	78067466	78062423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_78063510_78063750_78063957_78067385
Isoform_146108_544	chr5	+	737	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2205	22	-6	3	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	544	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCACTTGCCTTGAA	NA	False	NA	14	True	AATAAA	-16	NA	115376099	115379028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
Isoform_146109_13	chr5	+	816	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2126	22	-17	3	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCACTTGCCTTGAA	NA	False	NA	14	True	AATAAA	-16	NA	115376020	115379028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
Isoform_14611_3	chr10	+	216	1	FSM	ENSMUSG00000071532.7	ENSMUST00000096020.7	468	1	301	-49	301	49	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATTAAT	8027	False	NA	NA	False	AATATA	-17	NA	14399122	14399338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_14399100_14399300
Isoform_146113_108	chr5	+	802	4	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	-6	3	intron_retention	FALSE	canonical	3	770	junction_1	71.2242156073964	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCACTTGCCTTGAA	NA	False	NA	14	True	AATAAA	-16	NA	115376099	115379028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115376337_115378220_115378371_115378531_115378616_115378697
Isoform_146118_709	chr5	+	2009	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	30	-2	1	2	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATGTCACTTTTTGGC	NA	False	NA	23	True	AATAAA	-21	NA	115417754	115435033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
Isoform_146120_42	chr5	+	2108	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	28	-99	-1	99	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTAGACAGTGTTGTAT	NA	False	NA	3	True	AGTAAA	-19	NA	115417752	115435130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
Isoform_146125_1774	chr5	+	1169	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-8	1	-8	-1	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCGTGCAGTTGTCTTT	126	False	NA	38	True	AATATA	-17	NA	115465227	115471138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
Isoform_146129_40	chr5	+	1271	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-111	2	-111	-2	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGCGTGCAGTTGTCTT	23	False	NA	37	True	AATATA	-16	NA	115465124	115471137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
Isoform_146138_394	chr5	+	1045	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	25	18	25	-18	multi-exon	FALSE	canonical	3	209	junction_1	0	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTTGCTCCCAAAACC	2439	False	NA	26	True	AATAAA	-18	NA	115479308	115481610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115479477_115480733
Isoform_146139_11	chr5	+	2971	13	Fusion	ENSMUSG00000087292.2_ENSMUSG00000054256.12	novel	806	9	NA	NA	-3	-6	multi-exon	FALSE	canonical	2	9	junction_2	31.6227766016838	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	4779	False	NA	9	True	AATAAA	-9	NA	115497152	115593751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr5_+_115497328_115548673_115548759_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
Isoform_146140_15	chr5	+	2949	13	Fusion	ENSMUSG00000087292.2_ENSMUSG00000054256.12	novel	806	9	NA	NA	5	-6	multi-exon	FALSE	canonical	2	9	junction_2	32.3525501313266	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	4768	False	NA	9	True	AATAAA	-9	NA	115497141	115593751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr5_+_115497328_115548673_115548759_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
Isoform_146141_85	chr5	+	3116	15	FSM	ENSMUSG00000054256.12	ENSMUST00000150779.8	3133	15	11	6	11	-6	multi-exon	FALSE	canonical	3	46	junction_12	14.3358050392173	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	2400	False	NA	9	True	AATAAA	-9	NA	115567668	115593751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
Isoform_146144_58	chr5	+	3083	15	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	3	37	junction_12	16.062378404209	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	2400	False	NA	9	True	AATAAA	-9	NA	115567668	115593751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
Isoform_146146_12	chr5	+	3049	14	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	21	-6	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	24.7218849935262	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	2410	False	NA	9	True	AATAAA	-9	NA	115567678	115593751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115588273_115588343_115588845_115589034_115589515_115589580_115591884
Isoform_146147_3	chr5	+	2983	14	ISM	ENSMUSG00000054256.12	ENSMUST00000150779.8	3133	15	316	4	-82	-4	3prime_fragment	FALSE	canonical	3	46	junction_11	14.7535974952977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTGCCTTTATTCATG	2705	False	NA	11	True	AATAAA	-11	NA	115567973	115593753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
Isoform_146155_86	chr5	+	3769	12	FSM	ENSMUSG00000029528.20	ENSMUST00000086523.7	2667	12	-98	-1004	-1	0	multi-exon	FALSE	canonical	3	21	junction_6	97.41612200476	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGCTGATGTTATTTCT	NA	False	NA	14	True	AATAAA	-18	NA	115644768	115694041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689546_115689649_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
Isoform_146157_824	chr5	+	3673	11	FSM	ENSMUSG00000029528.20	ENSMUST00000067268.15	3706	11	28	5	-7	0	multi-exon	FALSE	canonical	3	245	junction_6	21.5722043379901	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGCTGATGTTATTTCT	NA	False	NA	14	True	AATAAA	-18	NA	115644762	115694041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
Isoform_146169_21251	chr5	+	1095	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	48	215	-22	-215	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	21251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCGGTCTGGATTTAT	NA	False	NA	22	True	AATAAA	-16	NA	115697573	115701571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
Isoform_146171_644	chr5	+	1218	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	48	92	-22	-92	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGTTTTTTGAGACA	NA	False	NA	25	True	ATTAAA	-22	NA	115697573	115701694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
Isoform_14619_6271	chr11	-	530	5	FSM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	28	2	28	-2	multi-exon	FALSE	canonical	3	10927	junction_1	3598.81438810061	6271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGCTGCTTGTCATTT	5991	False	NA	-16	True	AATATA	-17	NA	78074382	78071762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074344
Isoform_146195_11	chr5	+	2226	15	FSM	ENSMUSG00000041638.19	ENSMUST00000141472.8	2224	15	-1	-1	-1	1	multi-exon	TRUE	canonical	3	386	junction_9	39.4497872527307	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115703329	115722298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456
Isoform_146196_6	chr5	+	1836	16	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	18	36549	0	-1313	5prime_fragment	FALSE	canonical	3	352	junction_15	43.1366819926305	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTATCTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	115703330	115724164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864
Isoform_146200_373	chr5	+	8528	58	FSM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	23	4	1	2	multi-exon	FALSE	canonical	2	352	junction_15	70.6565046091486	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703335	115760709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
Isoform_146202_8	chr5	+	8740	57	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	3	intron_retention	FALSE	canonical	2	352	junction_15	70.4387466389148	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGGAGTTTGTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	115703330	115760710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
Isoform_146268_747	chr5	+	2208	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	33	579	33	-579	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTCTCCACTTGTCC	NA	False	NA	16	True	AATAAA	-18	NA	115769999	115785216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
Isoform_146270_50	chr5	+	2797	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	17	6	17	-6	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTCCTAGGGTCTGT	NA	False	NA	19	True	AATAAA	-15	NA	115769983	115785789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
Isoform_146274_14	chr5	+	2236	6	FSM	ENSMUSG00000029518.16	ENSMUST00000138885.2	966	6	-231	-1039	2	-578	multi-exon	FALSE	canonical	2	12	junction_2	85.478418328839	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTCCACTTGTCCA	NA	False	NA	17	True	AATAAA	-19	NA	115769968	115785217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115770258_115775774_115775826_115778142_115778263_115781426_115781552_115781633_115781759_115783691
Isoform_146278_13	chr5	+	2139	11	NIC	ENSMUSG00000029516.20	novel	2335	10	NA	NA	-13	407	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.3971770980332	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8468	False	NA	NA	False	ATTAAA	-30	NA	115983323	116064175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
Isoform_146280_5	chr5	+	1951	9	NIC	ENSMUSG00000029516.20	novel	1671	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	12.2212673238089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	8481	False	NA	NA	False	NA	NA	NA	115983336	116025661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712
Isoform_146281_15	chr5	+	2067	11	NNC	ENSMUSG00000029516.20	novel	1671	11	NA	NA	-5	407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11.3229854720387	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8476	False	NA	NA	False	ATTAAA	-30	NA	115983331	116064175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_115983361_115984405_115984525_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
Isoform_146283_6	chr5	+	6525	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	7.55215609798917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	8484	False	NA	NA	False	AATAAA	-17	NA	115983339	116136558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
Isoform_146284_8	chr5	+	2080	11	FSM	ENSMUSG00000029516.20	ENSMUST00000147330.8	1671	11	5	-414	2	407	multi-exon	FALSE	canonical	3	12	junction_1	12.568213874692	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8486	False	NA	NA	False	ATTAAA	-30	NA	115983341	116064175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_115983383_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
Isoform_146287_11	chr5	+	4334	28	NIC	ENSMUSG00000029516.20	novel	4398	28	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	6.95488104645726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	116083374	116136557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_116083531_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
Isoform_146289_4	chr5	+	504	2	ISM	ENSMUSG00000086219.8	ENSMUST00000133548.5	562	3	2	22343	2	-22343	5prime_fragment	FALSE	canonical	3	389	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAGAAATAAAAATTAAGG	NA	False	NA	NA	False	NA	NA	NA	116576780	116577814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_116576898_116577427
Isoform_146290_3	chr5	+	561	3	FSM	ENSMUSG00000086219.8	ENSMUST00000133548.5	562	3	0	1	0	-1	multi-exon	FALSE	canonical	3	381	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTCATTCCGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	116576778	116600156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_116576898_116577427_116577496_116599782
Isoform_146291_9	chr5	+	3071	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	3	286	3	-286	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGCTCTTACTAGTTGT	NA	False	NA	NA	False	NA	NA	NA	116576781	116603260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
Isoform_146292_86	chr5	+	452	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	0	2908	0	481	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGTTGTTGTTGTTTTG	NA	False	NA	11	True	NA	NA	NA	116576778	116600638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
Isoform_146294_3	chr5	+	3250	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	0	110	0	-110	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTTGTGTGTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	116576778	116603436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
Isoform_146295_3	chr5	+	3256	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	0	-165	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTGGGCTAAATGATTG	NA	False	NA	NA	False	NA	NA	NA	116576778	116603381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
Isoform_146296_9	chr5	+	3156	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	-9	-274	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTGTCTTGTGTTTCAG	NA	False	NA	NA	False	NA	NA	NA	116576769	116603272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
Isoform_146297_41	chr5	+	513	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	0	481	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGTTGTTGTTGTTTTG	NA	False	NA	11	True	NA	NA	NA	116576778	116600638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
Isoform_146299_71	chr5	+	3081	21	FSM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	27	1359	27	-9	multi-exon	TRUE	canonical	0	0	junction_10	2.74727137356323	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAAAGA	1413	False	NA	12	True	ATTAAA	-18	NA	117258220	117411923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
Isoform_146300_3	chr5	+	1298	9	NNC	ENSMUSG00000061288.14	novel	4467	21	NA	NA	9	3937	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	2.54644359843292	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAAAG	1395	False	NA	NA	False	NA	NA	NA	117258202	117345285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117344916
Isoform_146301_12	chr5	+	2996	20	NIC	ENSMUSG00000061288.14	novel	4467	21	NA	NA	27	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.94266542073566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAAAGA	1413	False	NA	12	True	ATTAAA	-18	NA	117258220	117411923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_117258405_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
Isoform_146302_14	chr5	+	3096	21	NIC	ENSMUSG00000061288.14	novel	2172	8	NA	NA	4	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.87402157263998	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAAAGA	7562	False	NA	12	True	ATTAAA	-18	NA	117264369	117411923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_117264569_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
Isoform_146303_55	chr5	+	4014	10	FSM	ENSMUSG00000066894.15	ENSMUST00000111967.8	4236	10	215	7	6	1	multi-exon	FALSE	canonical	2	11	junction_3	6.48264539813992	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATACATTTCTATGG	NA	False	NA	-4	True	AATAAA	-12	NA	117457362	117493063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
Isoform_146305_13	chr5	+	4090	10	FSM	ENSMUSG00000066894.15	ENSMUST00000111967.8	4236	10	139	7	-70	1	multi-exon	FALSE	canonical	2	11	junction_3	6.48264539813992	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATACATTTCTATGG	NA	False	NA	-4	True	AATAAA	-12	NA	117457286	117493063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
Isoform_146306_6	chr5	+	4240	10	NNC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8.94151090610254	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACATACATTTCTAT	NA	False	NA	-6	True	AATAAA	-10	NA	117457133	117493061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476272_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
Isoform_146309_3	chr5	+	4096	9	NIC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	-92	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	9.52299847737046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATACATTTCTATGG	NA	False	NA	-4	True	AATAAA	-12	NA	117457264	117493063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117489629_117489857_117490815
Isoform_146311_24	chr5	+	3312	3	NNC	ENSMUSG00000029364.16	novel	3357	2	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	318.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	117495395	117504844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_117495539_117501655_117502404_117502423
Isoform_146314_1099	chr5	+	2356	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	41	24	40	-24	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAGAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117495409	117516642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
Isoform_146315_190	chr5	+	2393	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	4	24	3	-24	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAGAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117495372	117516642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
Isoform_146328_3	chr5	+	769	2	FSM	ENSMUSG00000086075.2	ENSMUST00000140833.2	3492	2	0	2723	0	191	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTATGGCAGTAGACTC	NA	False	NA	NA	False	NA	NA	NA	117527203	117528840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_117527351_117528218
Isoform_146330_17	chr5	+	5339	4	NNC	ENSMUSG00000029361.19	novel	4388	28	NA	NA	30407	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.3113940087595	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACTCA	NA	False	NA	-9	True	NA	NA	NA	118087646	118096885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_118087894_118090829_118090949_118091862_118095048_118095097
Isoform_146334_196	chr5	+	2401	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	48	1510	4	129	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTTTTGTTGTTGT	NA	False	NA	28	True	AATACA	-20	NA	118114842	118146756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
Isoform_146336_144	chr5	+	3906	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	48	5	4	-4	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGCCAGTGACCTGCC	NA	False	NA	6	True	AATAAA	-17	NA	118114842	118148261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
Isoform_146339_559	chr5	+	2380	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-6	1509	4	129	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTTTTGTTGTTGT	NA	False	NA	28	True	AATACA	-20	NA	118114842	118146756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
Isoform_146340_350	chr5	+	3885	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-6	4	4	-4	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGCCAGTGACCTGCC	NA	False	NA	6	True	AATAAA	-17	NA	118114842	118148261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
Isoform_146353_12	chr5	+	988	8	FSM	ENSMUSG00000029359.14	ENSMUST00000031304.14	1031	8	35	8	13	0	multi-exon	FALSE	canonical	3	55	junction_1	14.2499552451857	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGCATCCCCATCTGTC	NA	False	NA	9	True	AATAAA	-14	NA	118165842	118199935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
Isoform_146354_38	chr5	+	939	8	FSM	ENSMUSG00000029359.14	ENSMUST00000031304.14	1031	8	84	8	-43	0	multi-exon	FALSE	canonical	3	55	junction_1	14.2499552451857	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGCATCCCCATCTGTC	NA	False	NA	9	True	AATAAA	-14	NA	118165891	118199935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
Isoform_146355_11	chr5	+	945	8	FSM	ENSMUSG00000029359.14	ENSMUST00000124648.8	981	8	62	-26	-43	1	multi-exon	FALSE	canonical	3	17	junction_5	26.954231805876	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCATCCCCATCTGTCC	NA	False	NA	10	True	AATAAA	-15	NA	118165891	118199936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194509_118194601_118194710_118197506_118197555_118199666
Isoform_146356_4	chr5	+	1052	7	FSM	ENSMUSG00000029359.14	ENSMUST00000135540.8	994	7	-56	-2	49	2	multi-exon	FALSE	canonical	3	55	junction_1	15.0111069989303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCATCCCCATCTGTCCC	NA	False	NA	11	True	AATAAA	-16	NA	118165878	118199937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194710_118197506_118197555_118199666
Isoform_146357_15	chr5	+	920	8	NIC	ENSMUSG00000029359.14	novel	785	8	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	22.6445470302252	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGCATCCCCATCTGTC	4325	False	NA	9	True	AATAAA	-14	NA	118174052	118199935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
Isoform_146358_4	chr5	+	906	8	FSM	ENSMUSG00000029359.14	ENSMUST00000151792.8	785	8	-24	-97	-24	0	multi-exon	FALSE	canonical	3	17	junction_5	31.162510181568	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGCATCCCCATCTGTC	4344	False	NA	9	True	AATAAA	-14	NA	118174071	118199935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194509_118194601_118194710_118197506_118197555_118199666
Isoform_146364_22	chr5	+	5394	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	-13	1	-13	-1	multi-exon	FALSE	canonical	3	61	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATGCCTCTGTGTGTTT	NA	False	NA	NA	False	TTTAAA	-20	NA	118307799	118327542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118308194_118322542
Isoform_146366_49	chr5	+	2650	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	18	2981	18	-2981	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTGTGGAATGTGG	1657	False	NA	7	True	NA	NA	NA	118383309	118401177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
Isoform_146367_181	chr5	+	1062	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	18	4569	18	-4569	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCATTTCCTGAGCGTCG	1657	False	NA	11	True	AATACA	-20	NA	118383309	118399589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
Isoform_146371_4	chr5	+	4988	13	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	185051	2	-1549	-2	3prime_fragment	FALSE	canonical	3	47	junction_4	10.773875295774	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCGAGTGGCTCTTTTC	NA	False	NA	28	True	AATAAA	-16	NA	118883834	118903501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
Isoform_146372_5	chr5	+	4414	11	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	188127	5	1527	-5	3prime_fragment	FALSE	canonical	3	47	junction_2	10.3058235963944	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTCGAGTGGCTCTT	NA	False	NA	25	True	AATAAA	-13	NA	118886910	118903498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
Isoform_146375_5	chr5	+	3243	5	ISM	ENSMUSG00000018076.13	ENSMUST00000202538.4	4389	11	8322	-1519	5254	-3	3prime_fragment	FALSE	canonical	3	60	junction_1	8.16624148553054	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGAGTGGCTCTTTT	NA	False	NA	27	True	AATAAA	-15	NA	118893705	118903500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
Isoform_146376_62	chr5	+	4003	9	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-39	-554	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	314.870608345714	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTTATGTAATTATTT	NA	False	NA	23	True	AATAAA	-23	NA	119809043	119822072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_146379_62	chr5	+	4678	9	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	314.870608345714	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119809084	119822788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_146386_50	chr5	+	4618	8	FSM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	158	1	2	-1	multi-exon	FALSE	canonical	3	95	junction_1	319.496925985659	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119809084	119822788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_146390_530	chr5	+	4853	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	2	1	2	-1	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119809084	119822788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_146391_563	chr5	+	4135	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	2	719	2	-556	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTATTTATGTAATTAT	NA	False	NA	21	True	AATAAA	-21	NA	119809084	119822070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_146418_491	chr5	+	4793	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	351	-162	2	-1	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119809084	119822788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_146421_493	chr5	+	4075	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	351	556	2	-556	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTATTTATGTAATTAT	NA	False	NA	21	True	AATAAA	-21	NA	119809084	119822070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_146456_199	chr5	+	2155	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9268	719	37	-556	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTATTTATGTAATTAT	NA	False	NA	21	True	AATAAA	-21	NA	119818350	119822070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_119819131_119820695
Isoform_146457_134	chr5	+	2745	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9252	145	21	18	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	119818334	119822644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_119819131_119820695
Isoform_146459_125	chr5	+	2882	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9259	1	28	-1	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119818341	119822788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_119819131_119820695
Isoform_146492_350	chr5	+	3962	24	FSM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	48	0	-4	0	multi-exon	FALSE	canonical	3	93	junction_16	11.5488606136917	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATGTCACTCTGTCAC	NA	False	NA	21	True	AATAAA	-31	NA	120254577	120337046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
Isoform_146499_226	chr5	+	2874	16	FSM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	24	0	24	0	multi-exon	FALSE	non_canonical	0	0	junction_5	54.5084702897938	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	20	True	NA	6	True	AATAAA	-22	NA	120649256	120672089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
Isoform_146500_24	chr5	+	2907	16	FSM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	-8	-1	-8	1	multi-exon	FALSE	non_canonical	0	0	junction_5	54.5084702897938	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGTCCCACAGGGTC	-12	True	NA	7	True	AATAAA	-23	NA	120649224	120672090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
Isoform_146501_33	chr5	+	2724	14	FSM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	-60	-3	24	-1	multi-exon	FALSE	non_canonical	0	0	junction_5	64.1450833343938	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	20	True	NA	5	True	AATAAA	-21	NA	120649256	120672088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
Isoform_146502_206	chr5	+	2542	13	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	23	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	57.0079794609686	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	19	True	NA	6	True	AATAAA	-22	NA	120649255	120672089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
Isoform_146504_15	chr5	+	2393	11	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	23	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	71.8476861144463	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	19	True	NA	6	True	AATAAA	-22	NA	120649255	120672089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120670924
Isoform_146517_1744	chr5	+	2972	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	385	965	-3	0	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGAGTGTGGCTTCCT	NA	False	NA	27	True	AATAAA	-18	NA	120751188	120765692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
Isoform_146518_39	chr5	+	3942	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	377	3	-11	-3	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCAAGGTATTCCTCCT	NA	False	NA	13	True	GATAAA	-23	NA	120751180	120766654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
Isoform_146545_4	chr5	+	2643	15	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	35	7170	35	-6879	5prime_fragment	TRUE	canonical	3	12	junction_7	6.94291593155592	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120787287	120810492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605
Isoform_146548_29	chr5	+	3212	21	FSM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	38	1	38	-1	multi-exon	FALSE	canonical	3	12	junction_7	7.30479294709987	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGTGACGTGTTAAAATC	NA	False	NA	10	True	TATAAA	-20	NA	120787290	120817661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
Isoform_146552_4	chr5	+	2393	14	NIC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	8797	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	8.73949073029156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	NA	False	NA	11	True	TATAAA	-21	NA	120800228	120817662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_120800381_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
Isoform_146557_6350	chr5	+	942	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	53	275	-12	0	multi-exon	FALSE	canonical	3	7748	junction_1	3319.97705815367	6350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTCCTTTTTGTG	NA	False	NA	1	True	ATTAAA	-15	NA	121342596	121347029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
Isoform_146558_131	chr5	+	986	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	10	274	10	1	multi-exon	FALSE	canonical	3	7748	junction_1	3319.97705815367	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342553	121347030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
Isoform_146578_5	chr5	+	1310	2	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	-5	113851	-5	-44723	5prime_fragment	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCACCTGGTCACAAGA	4310	False	NA	NA	False	AATAAA	-26	NA	121358276	121392789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_121358721_121391923
Isoform_146584_452	chr5	+	3116	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	60	2271	1	207	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGCAGGACCCTCATC	NA	False	NA	28	True	ATTAAA	-33	NA	121536058	121578201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
Isoform_146585_57	chr5	+	5529	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	60	-142	1	142	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCCTGGTTCGTTTTT	NA	False	NA	28	True	CATAAA	-21	NA	121536058	121580614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
Isoform_146586_204	chr5	+	5385	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	60	2	1	-2	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCAGGTTTGTTGAGA	NA	False	NA	17	True	AATACA	-16	NA	121536058	121580470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
Isoform_146598_11	chr5	+	1365	11	FSM	ENSMUSG00000029452.19	ENSMUST00000094357.11	1366	11	28	-27	28	0	multi-exon	FALSE	canonical	3	13	junction_1	4.13400532171888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGTCATTTGCAAGCTC	NA	False	NA	NA	False	AATAAA	-18	NA	121601242	121633484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121620395_121620501_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
Isoform_146599_3	chr5	+	1263	10	FSM	ENSMUSG00000029452.19	ENSMUST00000031405.12	1288	10	25	0	25	0	multi-exon	FALSE	canonical	2	4	junction_4	6.43102050155013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGTCATTTGCAAGCTC	NA	False	NA	NA	False	AATAAA	-18	NA	121601239	121633484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
Isoform_146600_6	chr5	+	3751	13	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	9	junction_2	43.3310095530774	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTACGTTTGAGTCT	914	False	NA	9	True	AATAAA	-19	NA	121798632	121825308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_121798912_121800062_121800225_121801304_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191_121824288_121824316
Isoform_146601_22	chr5	+	1160	4	ISM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	7	21635	-4	-20	5prime_fragment	FALSE	canonical	3	161	junction_3	9.97775303139718	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATACAA	914	False	NA	NA	False	NA	NA	NA	121798632	121803684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161
Isoform_146602_293	chr5	+	3704	13	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	non_canonical	3	54	junction_12	32.1769197821461	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTACGTTTGAGTCTG	908	False	NA	10	True	AATAAA	-20	NA	121798626	121825309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191_121824288_121824316
Isoform_146604_4	chr5	+	2558	5	ISM	ENSMUSG00000029458.15	ENSMUST00000127703.3	3094	9	12685	5	-3717	0	3prime_fragment	FALSE	canonical	3	111	junction_4	7.07106781186548	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGTTACGTTTGAGT	NA	False	NA	7	True	AATAAA	-17	NA	121817273	121825306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
Isoform_146605_15	chr5	+	4279	25	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.075703112182	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	829	False	NA	4	True	TTTAAA	-7	NA	121849858	121953013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
Isoform_146607_18	chr5	+	4062	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.5151447085683	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	877	False	NA	4	True	TTTAAA	-7	NA	121849906	121953013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
Isoform_146612_51	chr5	+	4177	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	57.6288233911142	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	877	False	NA	4	True	TTTAAA	-7	NA	121849906	121953013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
Isoform_146613_41	chr5	+	4057	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-68	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	57.0768837723033	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACCCAGTTAGTGTGTG	825	False	NA	1	True	TTTAAA	-4	NA	121849854	121953010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
Isoform_146615_9	chr5	+	4267	25	FSM	ENSMUSG00000042605.17	ENSMUST00000051950.14	4472	25	202	3	-49	-2	multi-exon	FALSE	canonical	0	0	junction_9	70.6657699432099	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACCCAGTTAGTGTGTG	844	False	NA	1	True	TTTAAA	-4	NA	121849873	121953010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
Isoform_146616_19	chr5	+	4074	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	71.1456611745913	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	871	False	NA	4	True	TTTAAA	-7	NA	121849900	121953013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
Isoform_146618_22	chr5	+	4231	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.4990588520743	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	829	False	NA	4	True	TTTAAA	-7	NA	121849858	121953013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
Isoform_14662_345	chr11	-	5904	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	305	279	305	3	multi-exon	FALSE	canonical	3	251	junction_18	43.9224555183955	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTGCCGAGGCCTCCAG	NA	False	NA	-9	True	AATAAA	-16	NA	78136508	78097850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
Isoform_146621_65	chr5	+	4020	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.0259987326855	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	871	False	NA	4	True	TTTAAA	-7	NA	121849900	121953013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
Isoform_146623_121	chr5	+	2333	4	FSM	ENSMUSG00000044134.10	ENSMUST00000056654.8	2368	4	38	-3	28	3	multi-exon	FALSE	canonical	3	24	junction_1	9.62635271879577	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTGGGTGTATTATTG	5462	False	NA	2	True	AATAAA	-13	NA	121987095	121992665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121987188_121988532_121988610_121989230_121989343_121990613
Isoform_146624_13	chr5	+	2321	3	FSM	ENSMUSG00000044134.10	ENSMUST00000198271.5	2335	3	-11	25	-11	8	multi-exon	FALSE	canonical	2	8	junction_1	19.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTATTATTGTTCTC	5402	False	NA	7	True	AATAAA	-18	NA	121987035	121992670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_121987188_121989230_121989343_121990613
Isoform_146626_9	chr5	+	658	7	FSM	ENSMUSG00000013936.13	ENSMUST00000014080.13	662	7	3	1	3	-1	multi-exon	FALSE	canonical	3	15	junction_3	1.91485421551268	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGACCATTGGCTCA	3608	False	NA	NA	False	AATAAA	-20	NA	122239016	122244916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122239093_122239811_122239902_122240758_122240835_122241893_122241999_122242889_122242969_122243050_122243100_122244733
Isoform_14663_68	chr11	-	6174	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	36	278	36	4	multi-exon	FALSE	canonical	3	251	junction_18	43.9224555183955	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78136777	78097849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
Isoform_146631_1963	chr5	+	2361	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	18	5	18	-1	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTCGTGTCTTTCTGT	NA	False	NA	-2	True	ATTAAA	-14	NA	122296358	122313331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
Isoform_146633_172	chr5	+	2429	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	-50	5	-50	-1	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTCGTGTCTTTCTGT	NA	False	NA	-2	True	ATTAAA	-14	NA	122296290	122313331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
Isoform_146648_262	chr5	+	1488	8	FSM	ENSMUSG00000004455.17	ENSMUST00000086294.11	1442	8	-51	5	27	-1	multi-exon	FALSE	canonical	3	517	junction_7	836.265410461711	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTCGTGTCTTTCTGT	NA	False	NA	-2	True	ATTAAA	-14	NA	122296367	122313331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117_122312179_122313042
Isoform_146649_135	chr5	+	2502	6	FSM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	-11	1	-11	-1	multi-exon	FALSE	canonical	3	2504	junction_1	193.218425622403	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTCGTGTCTTTCTGT	NA	False	NA	-2	True	ATTAAA	-14	NA	122296407	122313331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
Isoform_14665_22	chr11	-	6197	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	287	4	287	-4	multi-exon	TRUE	canonical	3	251	junction_18	43.9224555183955	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGGGTTTATTGTTTTT	NA	False	NA	-5	True	NA	NA	NA	78136526	78097575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
Isoform_14666_20	chr11	-	6461	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	-247	274	-247	8	multi-exon	FALSE	canonical	3	251	junction_18	43.9224555183955	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGAGGCCTCCAGCTCCC	NA	False	NA	-4	True	AATAAA	-21	NA	78137060	78097845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
Isoform_146672_86	chr5	+	2882	8	NIC	ENSMUSG00000064267.14	novel	2805	7	NA	NA	44	-24	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	18.6153327191565	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCATGGGGCTTTC	NA	False	NA	4	True	AATAAA	-15	NA	122344910	122380336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_122345220_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
Isoform_146673_40	chr5	+	2980	8	NIC	ENSMUSG00000064267.14	novel	2805	7	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	18.6153327191565	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCGGCTCCTTTTTGTTG	NA	False	NA	29	True	AATAAA	-40	NA	122344837	122380361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_122345220_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
Isoform_146677_99	chr5	+	2610	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	154	26	-26	-26	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGCTGTCATGGGGCTT	NA	False	NA	2	True	AATAAA	-13	NA	122347945	122380334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
Isoform_146678_12	chr5	+	2836	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	-46	0	-46	0	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCGGCTCCTTTTTGTT	NA	False	NA	28	True	AATAAA	-39	NA	122347745	122380360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
Isoform_146680_35	chr5	+	2604	7	FSM	ENSMUSG00000064267.14	ENSMUST00000100747.3	2805	7	177	24	177	-24	multi-exon	FALSE	canonical	3	76	junction_1	6.12825877028341	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCATGGGGCTTTC	NA	False	NA	4	True	AATAAA	-15	NA	122348373	122380336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
Isoform_146687_193	chr5	+	4616	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	28	0	28	0	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCACTCCTTTGGTTTG	-12	True	NA	24	True	AATAAA	-37	NA	122422455	122462344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
Isoform_146691_251	chr5	+	991	5	FSM	ENSMUSG00000029462.19	ENSMUST00000118830.8	1014	5	24	-1	0	1	multi-exon	FALSE	canonical	3	527	junction_1	833.067074130289	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTGAAAACCTGTG	719	False	NA	18	True	AATAAA	-18	NA	122492471	122501350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122492540_122494856_122494869_122498075_122498268_122500098_122500335_122500867
Isoform_146695_39	chr5	+	2662	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	54	0	1	0	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	733	False	NA	11	True	AATAAA	-24	NA	122492485	122503047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
Isoform_146697_667	chr5	+	965	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	54	1697	1	1	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTGAAAACCTGTG	733	False	NA	18	True	AATAAA	-18	NA	122492485	122501350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
Isoform_146707_12	chr5	+	1624	7	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	52	0	-24	0	intron_retention	FALSE	canonical	3	424	junction_4	38.3608596821755	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8091	False	NA	NA	False	AATAAA	-42	NA	122510565	122520965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110
Isoform_146710_438	chr5	+	1483	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	104	5	28	-5	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTGTGTTTGAGGTTT	8143	False	NA	NA	False	AATAAA	-37	NA	122510617	122520960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
Isoform_146711_238	chr5	+	1514	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	73	5	-3	-5	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTGTGTTTGAGGTTT	8112	False	NA	NA	False	AATAAA	-37	NA	122510586	122520960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
Isoform_146713_52	chr5	+	1578	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	11	3	11	-3	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTTTGAGGTTTGT	8050	False	NA	NA	False	AATAAA	-39	NA	122510524	122520962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
Isoform_146720_695	chr5	+	859	7	FSM	ENSMUSG00000029465.15	ENSMUST00000102525.11	899	7	40	0	-4	0	multi-exon	FALSE	canonical	3	554	junction_4	26.4638117687784	695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTGTACCGTGTATG	4528	False	NA	38	True	ATTAAA	-22	NA	122529980	122544242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122530061_122534879_122534980_122539709_122539787_122541421_122541491_122542186_122542314_122543146_122543242_122543931
Isoform_146724_14	chr5	+	2004	10	FSM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	-37	1632	0	-1	multi-exon	FALSE	canonical	3	226	junction_7	31.1071426040332	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGCTTTTACCTGTCAT	NA	False	NA	NA	False	ATTAAA	-22	NA	122560506	122579865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352
Isoform_146728_589	chr5	+	2264	11	FSM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	27	460	-10	-460	multi-exon	FALSE	canonical	3	226	junction_7	29.6310647800581	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGAGACTCTTCCT	NA	False	NA	28	True	AATAAA	-24	NA	122560533	122582515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
Isoform_146736_15	chr5	+	4873	14	NNC	ENSMUSG00000029468.18	novel	4936	13	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	7.0551504540296	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTAAGAATTCTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	122782009	122822348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869_122820465_122820487
Isoform_146737_4	chr5	+	4985	13	FSM	ENSMUSG00000029468.18	ENSMUST00000100737.10	4936	13	-44	-5	-44	-3	multi-exon	TRUE	canonical	3	11	junction_11	5.09015935135848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTCTTTGATTCCTTC	NA	False	NA	NA	False	AATAAA	-26	NA	122781929	122822357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
Isoform_146740_6	chr5	+	2677	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	26	-1	0	1	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGGCTGTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	122845632	122867802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
Isoform_146741_154	chr5	+	1979	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	26	697	0	-3	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATCCTTGTCTGTGCTG	NA	False	NA	12	True	ATTAAA	-17	NA	122845632	122867104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
Isoform_146744_7	chr5	+	1819	11	NIC	ENSMUSG00000029470.16	novel	2702	12	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	28.3167794778997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATCCTTGTCTGTGCT	NA	False	NA	11	True	ATTAAA	-16	NA	122845643	122867103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_122845851_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
Isoform_146746_33	chr5	+	2023	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	71	2346	-38	-2346	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	585	False	NA	9	True	AATAAA	-16	NA	122988181	123007008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
Isoform_146747_425	chr5	+	1933	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	161	2346	52	-2346	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	675	False	NA	9	True	AATAAA	-16	NA	122988271	123007008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
Isoform_146748_18	chr5	+	3189	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	161	1090	52	-1090	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTTGGTGGTTCATTA	675	False	NA	NA	False	ATTAAA	-40	NA	122988271	123008264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
Isoform_14675_3	chr11	-	2215	12	FSM	ENSMUSG00000001095.6	ENSMUST00000001122.6	2412	12	-20	217	-20	-217	multi-exon	FALSE	canonical	1	1	junction_6	4.88884714899955	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCGGGTGTGTTTCCCG	NA	False	NA	NA	False	ATTAAA	-14	NA	78313063	78288129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78288682_78289116_78289255_78289857_78290020_78290909_78291032_78291301_78291391_78291569_78291789_78293897_78294021_78294139_78294312_78295203_78295404_78295496_78295634_78297635_78297765_78312891
Isoform_146752_19	chr5	+	1760	5	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	6	-2346	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	85.4005269304587	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	629	False	NA	9	True	AATAAA	-16	NA	122988225	123007008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_122988362_123002049_123002458_123004864_123004970_123005182_123005385_123006099
Isoform_146755_174	chr5	+	1641	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	-56	290	-56	10	multi-exon	FALSE	canonical	3	186	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCTCATGTCTGTGT	4818	False	NA	6	True	NA	NA	NA	123153080	123168229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123153630_123167137
Isoform_146757_20	chr5	+	1960	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	-70	-15	-70	15	multi-exon	FALSE	canonical	3	186	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGGAGGTAGTTACA	4804	False	NA	NA	False	ATTAAA	-17	NA	123153066	123168534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123153630_123167137
Isoform_146760_3	chr5	+	2603	12	NIC	ENSMUSG00000054434.15	novel	2164	12	NA	NA	-19	456	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	33.8936108950364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGGCAGCCGGCCAC	NA	False	NA	NA	False	NA	NA	NA	123214368	123256268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_123214559_123236237_123236357_123237899_123238017_123239673_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
Isoform_146761_3	chr5	+	2565	10	ISM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	29	419	-21	321	intron_retention	FALSE	canonical	3	93	junction_3	12.2202018532156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTCTCTTGCC	NA	False	NA	27	True	NA	NA	NA	123214366	123255393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723
Isoform_146762_29	chr5	+	2576	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	45	-457	-5	457	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGGCAGCCGGCCACA	NA	False	NA	NA	False	NA	NA	NA	123214382	123256269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
Isoform_146763_87	chr5	+	1704	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	43	417	-7	323	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTCTCTTGCCTT	NA	False	NA	29	True	NA	NA	NA	123214380	123255395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
Isoform_146764_16	chr5	+	2621	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	0	-457	0	457	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGGCAGCCGGCCACA	NA	False	NA	NA	False	NA	NA	NA	123214337	123256269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
Isoform_146765_38	chr5	+	1734	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	8	422	8	318	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTACCTGTGTTGTCTCTT	NA	False	NA	24	True	NA	NA	NA	123214345	123255390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
Isoform_146766_4	chr5	+	2213	11	NIC	ENSMUSG00000054434.15	novel	2164	12	NA	NA	8	321	intron_retention	FALSE	canonical	3	93	junction_3	11.5969823661158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTCTCTTGCC	NA	False	NA	27	True	NA	NA	NA	123214345	123255393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123254334_123254706
Isoform_146767_4	chr5	+	2216	3	ISM	ENSMUSG00000029440.16	ENSMUST00000133386.2	2634	5	79	3790	11	1893	5prime_fragment	FALSE	canonical	3	158	junction_2	11.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123366331	123379541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_123366508_123372656_123372760_123377604
Isoform_146769_119	chr5	+	1366	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	62	1169	-6	435	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTCAGTATATTC	NA	False	NA	23	True	NA	NA	NA	123366314	123387025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
Isoform_14677_142	chr11	-	2418	4	FSM	ENSMUSG00000050132.14	ENSMUST00000153534.2	2497	4	0	79	0	-1	multi-exon	FALSE	canonical	3	65	junction_3	7.78888096369861	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGTCTGTCTTCAGT	4413	False	NA	-3	True	AATACA	-19	NA	78374624	78364117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259
Isoform_146771_15	chr5	+	1259	5	NIC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	-4	433	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	81.8183964643649	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGCTGTCAGTATAT	NA	False	NA	21	True	NA	NA	NA	123366316	123387023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_123366508_123377604_123377814_123379894_123379997_123384256_123384346_123386355
Isoform_146773_50	chr5	+	3766	6	FSM	ENSMUSG00000029438.10	ENSMUST00000031391.9	4718	6	42	910	-10	0	multi-exon	FALSE	canonical	3	24	junction_2	4.53431361950185	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGGCTGAGCCCATT	NA	False	NA	NA	False	AATAAA	-21	NA	123482552	123512145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080
Isoform_146777_13	chr5	+	7276	17	FSM	ENSMUSG00000038342.16	ENSMUST00000068237.12	7303	17	21	6	21	-3	multi-exon	TRUE	canonical	3	7	junction_15	14.8438486838825	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAAGGTTGTTCTGTGTG	NA	False	NA	14	True	AATAAA	-15	NA	123532883	123595989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123533406_123578098_123578206_123578875_123578962_123580344_123580435_123580790_123580833_123581092_123581265_123581938_123582029_123582507_123582600_123583530_123584186_123585240_123585363_123585481_123585639_123587352_123587478_123587958_123588058_123588158_123588287_123588489_123588614_123590600_123590731_123591454
Isoform_146779_11	chr5	+	1550	2	FSM	ENSMUSG00000029414.12	ENSMUST00000199838.2	347	2	12	-1215	2	1215	multi-exon	FALSE	canonical	3	399	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	123887790	123893338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123887888_123891885
Isoform_14678_7	chr11	-	5220	4	FSM	ENSMUSG00000050132.14	ENSMUST00000153534.2	2497	4	6	-2729	6	1846	multi-exon	FALSE	canonical	3	65	junction_3	7.78888096369861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTACTTGCATGTGTGT	4419	False	NA	NA	False	ATTAAA	-20	NA	78374618	78361309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259
Isoform_146782_418	chr5	+	6959	64	FSM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	2	0	2	0	multi-exon	FALSE	canonical	3	266	junction_8	72.5550989140863	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887790	123959656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
Isoform_146789_29	chr5	+	6829	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	86.4327991685586	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887790	123959647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
Isoform_14681_576	chr11	-	1306	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	41	0	41	0	multi-exon	FALSE	canonical	3	479	junction_5	35.6561355169065	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1672	False	NA	-29	True	AATAAA	-21	NA	78402957	78397880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
Isoform_146816_13	chr5	+	3224	2	FSM	ENSMUSG00000023106.16	ENSMUST00000171639.2	474	2	-20	-2730	-7	-18	multi-exon	FALSE	canonical	3	1559	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAGAAACAAAACCAA	9065	False	NA	NA	False	NA	NA	NA	124045324	124049281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124045430_124046162
Isoform_146817_15	chr5	+	1150	9	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	2	463	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	669.883758573083	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTCTCTTTTTT	9087	False	NA	15	True	AATAAA	-24	NA	124045346	124065659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_124045430_124046162_124046278_124046446_124046606_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
Isoform_146824_125	chr5	+	2207	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	101	31	1	-31	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAAGAGTGAAGT	9079	False	NA	NA	False	NA	NA	NA	124045338	124066867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
Isoform_146826_601	chr5	+	992	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	108	1239	1	463	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTCTCTTTTTT	9086	False	NA	15	True	AATAAA	-24	NA	124045345	124065659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
Isoform_14683_20	chr11	-	1526	5	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	41	-1	intron_retention	FALSE	canonical	3	479	junction_4	36.9425229241318	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATCTTTGGTCTTAA	1672	False	NA	-30	True	AATAAA	-20	NA	78402957	78397881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78398632_78399144_78399522_78400550_78400641_78401173_78401248_78402722
Isoform_146834_15	chr5	+	975	7	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	1	459	combination_of_known_splicesites	FALSE	canonical	3	116	junction_2	529.179684879237	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTTTTTTTTTCTCTT	9079	False	NA	11	True	AATAAA	-20	NA	124045338	124065655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_124045430_124046162_124046278_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
Isoform_146836_124	chr5	+	4347	32	FSM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	33	2355	33	1515	multi-exon	FALSE	canonical	3	34	junction_6	6.64046185222248	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCTAGTGAGGGCCTCT	NA	False	NA	6	True	AATAAA	-20	NA	124111723	124141266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
Isoform_146838_3	chr5	+	4143	32	FSM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	9	2583	9	1287	multi-exon	TRUE	canonical	3	34	junction_6	6.64046185222248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGAGGAGTGGCTGG	NA	False	NA	NA	False	AATAAA	-15	NA	124111699	124141038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
Isoform_146841_3	chr5	+	1636	6	ISM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	25	4	1	3	intron_retention	FALSE	canonical	3	59	junction_5	18.5105375394665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCTGTTTGCTATTAT	NA	False	NA	8	True	TATAAA	-13	NA	124250384	124253542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450
Isoform_146842_43	chr5	+	1568	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	27	1	-1	-1	multi-exon	FALSE	canonical	3	59	junction_5	17.423642940939	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTTGCTATTATTTA	NA	False	NA	11	True	TATAAA	-16	NA	124250386	124253545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
Isoform_146844_3	chr5	+	1481	7	FSM	ENSMUSG00000023707.14	ENSMUST00000119269.6	1474	7	-3	-4	-3	-3	multi-exon	TRUE	canonical	2	14	junction_5	31.3421973277773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTTTGCTATTATT	NA	False	NA	9	True	TATAAA	-14	NA	124250380	124253543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252541_124252709_124252777
Isoform_146846_4	chr5	+	1035	6	FSM	ENSMUSG00000023707.14	ENSMUST00000198770.2	818	6	-110	-107	0	-11	multi-exon	FALSE	canonical	3	23	junction_4	30.8506077735918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACACGCAGACTTTTG	NA	False	NA	14	True	AATAAA	-29	NA	124250383	124253137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252450_124252709_124252777
Isoform_146847_36	chr5	+	1024	6	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	229.659399981799	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254140	124256259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_124254308_124254496_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
Isoform_14685_16	chr11	-	2556	4	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	41	0	intron_retention	FALSE	canonical	3	479	junction_3	42.5519290592879	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1672	False	NA	-29	True	AATAAA	-21	NA	78402957	78397880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78398632_78399144_78400641_78401173_78401248_78402722
Isoform_146854_469	chr5	+	1190	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	2	0	2	0	multi-exon	FALSE	canonical	3	507	junction_1	46.874833333037	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254163	124256259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
Isoform_14686_45	chr11	-	3569	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	96	55	96	-55	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	-41	True	AATAAA	-19	NA	78427001	78413730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
Isoform_146862_58	chr5	+	1622	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	55	0	55	0	multi-exon	FALSE	canonical	3	74	junction_1	7.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCGAGGAAGCTGTGG	5453	False	NA	17	True	NA	NA	NA	124466215	124479907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124466293_124476689_124476999_124478671
Isoform_146872_163	chr5	+	2748	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	-10	1	-10	-1	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATGTGTTGTTGTTGTT	NA	False	NA	28	True	AATAAA	-37	NA	124577982	124600370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_146875_68	chr5	+	2581	7	FSM	ENSMUSG00000049327.18	ENSMUST00000199798.5	1789	7	-1	-791	-1	-6	multi-exon	FALSE	canonical	3	73	junction_1	269.798330033544	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACCTATGTGTTGTTG	NA	False	NA	23	True	AATAAA	-32	NA	124578028	124600365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124578079_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_146876_29	chr5	+	2629	7	FSM	ENSMUSG00000049327.18	ENSMUST00000199798.5	1789	7	-49	-791	-12	-6	multi-exon	FALSE	canonical	3	73	junction_1	269.798330033544	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACCTATGTGTTGTTG	NA	False	NA	23	True	AATAAA	-32	NA	124577980	124600365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124578079_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_146878_50	chr5	+	2870	8	FSM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	1	-759	1	-6	multi-exon	FALSE	canonical	3	31	junction_1	287.390653562537	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACCTATGTGTTGTTG	4409	False	NA	23	True	AATAAA	-32	NA	124583568	124600365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124583792_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_146884_587	chr5	+	2759	7	FSM	ENSMUSG00000049327.18	ENSMUST00000100709.7	1425	7	13	-1347	1	-1	multi-exon	FALSE	canonical	3	345	junction_1	170.424388578109	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATGTGTTGTTGTTGTT	4409	False	NA	28	True	AATAAA	-37	NA	124583568	124600370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_146890_65	chr5	+	2841	7	ISM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	276	-765	-3	0	3prime_fragment	FALSE	canonical	3	338	junction_1	172.952787392012	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	4684	False	NA	29	True	AATAAA	-38	NA	124583843	124600371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_146898_79	chr5	+	1072	2	FSM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	43	0	-25	0	multi-exon	FALSE	canonical	3	127	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGAGGTGGGGTTTGT	2263	False	NA	10	True	AATAAA	-24	NA	124621239	124629187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124621310_124628185
Isoform_14690_21	chr11	-	3596	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	69	55	69	-55	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	-41	True	AATAAA	-19	NA	78427028	78413730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
Isoform_146901_9	chr5	+	3579	2	FSM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	-2	-2462	-2	2462	multi-exon	FALSE	canonical	3	127	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCATCAGTTTTTCGTC	2218	False	NA	NA	False	AATAAA	-15	NA	124621194	124631649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124621310_124628185
Isoform_146903_3256	chr5	+	1981	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	84	9	84	1	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	3256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTATTTTGTGTTTT	NA	False	NA	3	True	AATAAA	-13	NA	124678841	124688560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
Isoform_146904_285	chr5	+	2007	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	58	9	58	1	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTATTTTGTGTTTT	NA	False	NA	3	True	AATAAA	-13	NA	124678815	124688560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
Isoform_146920_9	chr5	+	1043	2	ISM	ENSMUSG00000029389.18	ENSMUST00000136067.8	445	4	-16	5303	11	-1665	5prime_fragment	FALSE	canonical	3	111	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	124690942	124693488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_124691103_124692605
Isoform_146921_11	chr5	+	958	3	ISM	ENSMUSG00000029389.18	ENSMUST00000144433.2	477	5	-72	5361	-10	-1667	5prime_fragment	FALSE	canonical	3	110	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATAAATAAAATGTTAAA	NA	False	NA	NA	False	NA	NA	NA	124690948	124693486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_124691103_124692605_124692657_124692733
Isoform_146925_33	chr5	+	2780	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	17	2	12	-2	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTATCATTTTTTTTCT	NA	False	NA	3	True	AATAAA	-16	NA	124690943	124707721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
Isoform_146926_90	chr5	+	2090	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	22	687	-10	-687	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690948	124707036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
Isoform_146927_1043	chr5	+	1812	13	FSM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	23	837	-3	256	multi-exon	FALSE	canonical	3	570	junction_1	79.1684210331928	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCTTAGAGTGTTTT	NA	False	NA	21	True	AATAAA	-22	NA	124717225	124734906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
Isoform_146934_13	chr5	+	1928	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	10	256	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	210.460655467952	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCTTAGAGTGTTTT	NA	False	NA	21	True	AATAAA	-22	NA	124717214	124734906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727328_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
Isoform_146935_23	chr5	+	1916	14	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	4	254	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	271.182486212518	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTTTCCTTAGAGTGTT	NA	False	NA	19	True	AATAAA	-20	NA	124717208	124734904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_124717265_124720510_124720591_124721585_124721675_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
Isoform_146941_64	chr5	+	2413	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	40	282	2	-282	multi-exon	TRUE	canonical	3	31	junction_8	6.97499240366195	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCCTAGTGTTAAGTGAA	NA	False	NA	32	True	AATAAA	-22	NA	124736851	124765521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
Isoform_146942_12	chr5	+	2698	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	41	-4	-2	4	multi-exon	FALSE	canonical	3	31	junction_8	6.97499240366195	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTGGTGATGGTGATG	NA	False	NA	NA	False	ATTAAA	-20	NA	124736852	124765807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
Isoform_146943_7	chr5	+	3087	14	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	22	8960	9	-2397	5prime_fragment	FALSE	canonical	3	147	junction_7	16.1929928596131	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATTTGTTGAAGGC	NA	False	NA	NA	False	NA	NA	NA	124767138	124792559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177
Isoform_146947_181	chr5	+	5330	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	15	0	2	0	multi-exon	TRUE	canonical	3	142	junction_14	17.8821937464506	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTAGTTTTCTTGTGAT	NA	False	NA	10	True	AATAAA	-21	NA	124767131	124801519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
Isoform_14695_118	chr11	-	3555	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	157	56	96	-56	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTTCCAGTGAGCA	NA	False	NA	-42	True	AATAAA	-18	NA	78427001	78413731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
Isoform_146951_5	chr5	+	8762	49	ISM	ENSMUSG00000038011.16	ENSMUST00000058440.12	14038	79	49720	2	-11748	-2	3prime_fragment	TRUE	canonical	0	0	junction_1	2.62127712193885	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTGTGTTTTGGTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	124851868	124911370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_124852310_124852408_124852593_124854222_124854358_124854880_124855034_124856147_124856337_124859331_124859479_124860891_124861084_124862211_124862331_124864380_124864540_124866825_124866962_124868730_124868854_124870876_124871012_124871289_124871507_124873304_124873425_124874969_124875116_124875953_124876107_124877860_124878122_124878776_124878950_124880371_124880466_124880877_124881046_124881695_124881885_124882801_124882974_124885718_124885923_124886277_124886359_124888512_124888711_124889624_124889787_124890885_124891061_124891613_124891796_124893070_124893208_124894245_124894464_124894623_124894846_124895052_124895201_124896194_124896475_124896893_124897124_124898286_124898561_124899915_124900021_124900361_124900517_124901497_124901653_124903930_124904115_124905079_124905281_124905498_124905709_124905836_124905933_124906588_124906761_124907091_124907224_124907390_124907603_124907696_124907865_124909513_124909695_124910488_124910635_124911042
Isoform_146953_633	chr5	+	4081	4	FSM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	11	0	11	0	multi-exon	FALSE	canonical	3	206	junction_3	10.2089285540757	633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATGTTTCCTGTGTGGT	NA	False	NA	8	True	NA	NA	NA	124939765	124965694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014
Isoform_146960_13	chr5	+	1240	4	FSM	ENSMUSG00000037905.14	ENSMUST00000198811.2	745	4	-123	-372	59	372	multi-exon	FALSE	canonical	3	17	junction_2	166.423823080979	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGAAGGGAACGCTT	NA	False	NA	32	True	AATAAA	-24	NA	125518690	125532162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_125518957_125528733_125528837_125529211_125529310_125531389
Isoform_146962_172	chr5	+	1184	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	8	5281	8	363	multi-exon	FALSE	canonical	3	373	junction_1	23.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTATCAGAGCTTTGAAG	NA	False	NA	23	True	AATAAA	-15	NA	125518639	125532153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_125518957_125528733_125528837_125531389
Isoform_146969_389	chr5	+	3173	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	61	5	61	-5	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCAGTACGCGTGTGT	NA	False	NA	5	True	AATAAA	-22	NA	125552938	125594469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
Isoform_146970_107	chr5	+	3214	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	28	-3	28	3	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGCGTGTGTTTCTCTGA	NA	False	NA	13	True	AATAAA	-30	NA	125552905	125594477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
Isoform_146980_4	chr5	+	4271	9	FSM	ENSMUSG00000034324.17	ENSMUST00000119026.8	5134	9	-22	885	-22	42	multi-exon	TRUE	canonical	0	0	junction_2	1.8328597873269	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTTGTTTGTAATTC	NA	False	NA	NA	False	NA	NA	NA	127318849	127641972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_127319085_127436618_127437505_127539967_127540115_127581925_127582110_127613421_127613566_127628566_127628773_127630137_127630412_127631689_127631882_127639969
Isoform_146984_3	chr5	+	1802	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-53	1664	-53	-1664	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTGGGTGGTCATTCC	8648	False	NA	136	True	NA	NA	NA	127709272	127784774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
Isoform_146985_8	chr5	+	1541	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-48	1920	-48	-1920	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGAGCTGGCAGCATTT	8653	False	NA	NA	False	AAAAAG	-17	NA	127709277	127784518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
Isoform_146986_11	chr5	+	1663	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-16	1766	-16	-1766	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACCTGAGAGCCCAGCT	8685	False	NA	34	True	NA	NA	NA	127709309	127784672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
Isoform_146987_3	chr5	+	3617	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-202	-2	-202	2	multi-exon	TRUE	canonical	3	18	junction_6	12.1383212585269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGCTTGAATTGGCT	8499	False	NA	NA	False	NA	NA	NA	127709123	127786440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
Isoform_146988_5	chr5	+	3435	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-18	-4	-18	4	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTTGAATTGGCTCA	8683	False	NA	NA	False	NA	NA	NA	127709307	127786442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
Isoform_146989_4	chr5	+	789	7	NNC	ENSMUSG00000049971.18	novel	1713	11	NA	NA	-55	-22135	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	12.7986544431653	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTCTTGGTCATGG	8646	False	NA	NA	False	NA	NA	NA	127709270	127744800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127744557
Isoform_146990_299	chr5	+	2244	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	132	1	-1	-1	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTGAGTCATCTCTAG	474	False	NA	20	True	AATATA	-22	NA	129097264	129101386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
Isoform_146991_588	chr5	+	2195	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	181	1	-22	-1	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTGAGTCATCTCTAG	523	False	NA	20	True	AATATA	-22	NA	129097313	129101386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
Isoform_146992_7861	chr5	+	1037	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	181	1159	-22	-1159	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	7861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTGAATCATCCCTTG	523	False	NA	NA	False	AATAAA	-21	NA	129097313	129100228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
Isoform_146993_3789	chr5	+	1073	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	145	1159	12	-1159	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	3789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTGAATCATCCCTTG	487	False	NA	NA	False	AATAAA	-21	NA	129097277	129100228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
Isoform_14700_8	chr11	-	2218	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	93	1457	32	-1457	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427065	78415132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
Isoform_147007_528	chr5	+	1068	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	196	1159	196	-1159	multi-exon	FALSE	canonical	3	14794	junction_4	293.478040064329	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTGAATCATCCCTTG	741	False	NA	NA	False	AATAAA	-21	NA	129097531	129100228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
Isoform_14701_8	chr11	-	3607	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	143	18	82	-18	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGCTCAGTTCTTTT	NA	False	NA	-4	True	NA	NA	NA	78427015	78413693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
Isoform_147026_6	chr5	+	3334	13	ISM	ENSMUSG00000044017.17	ENSMUST00000056617.14	5163	26	47217	0	47210	0	3prime_fragment	FALSE	canonical	3	14	junction_1	14.247806848775	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTCTTGAGCGTCACA	NA	False	NA	29	True	AATAAA	-17	NA	129221030	129281663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
Isoform_147028_7	chr5	+	3272	12	ISM	ENSMUSG00000044017.17	ENSMUST00000056617.14	5163	26	65763	2	65756	-2	3prime_fragment	FALSE	canonical	3	43	junction_2	8.40306909693916	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGAGTCTTGAGCGTCA	4540	False	NA	27	True	AATAAA	-15	NA	129239576	129281661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
Isoform_147035_27	chr5	+	3358	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	24.9767793394753	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578308	129648448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
Isoform_147036_27	chr5	+	3215	18	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	23.627296395231	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGGGCTCTCCTTC	NA	False	NA	13	True	AATAAA	-26	NA	129578295	129648445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
Isoform_147038_50	chr5	+	3458	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_15	22.5492602052145	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578292	129648448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
Isoform_147039_78	chr5	+	3294	18	FSM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	19	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	20.649823847033	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578303	129648448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
Isoform_14704_1001	chr11	-	1334	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	41	0	41	0	multi-exon	FALSE	canonical	3	1037	junction_2	9	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	False	NA	-7	True	AATAAA	-23	NA	78441562	78432642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78433623_78434311_78434457_78441353
Isoform_147040_748	chr5	+	3503	10	FSM	ENSMUSG00000029436.10	ENSMUST00000031390.10	6422	10	31	2888	31	-2888	multi-exon	TRUE	canonical	3	158	junction_6	22.9879195327556	748	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTGACAGCTCAGTGGT	NA	False	NA	11	True	AATAAA	-17	NA	129661263	129685275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
Isoform_147047_99	chr5	+	828	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	26	-22	-5	22	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTATTGTGTGTGTGT	786	False	NA	45	True	CATAAA	-34	NA	129792592	129795566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
Isoform_147049_7	chr5	+	903	4	FSM	ENSMUSG00000034211.15	ENSMUST00000118420.8	843	4	24	-84	-6	1	multi-exon	FALSE	canonical	3	33	junction_2	354.785381134379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	785	False	NA	24	True	CATAAA	-13	NA	129792591	129795545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129792614_129792747_129792923_129793790_129793931_129794979
Isoform_147051_17	chr5	+	934	4	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	350.330637477734	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTTTGGCAGCTTGAT	786	False	NA	20	True	CATAAA	-9	NA	129792592	129795541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_129792614_129792747_129792959_129793790_129793931_129794979
Isoform_147053_52	chr5	+	954	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	32	4075	-5	1	multi-exon	FALSE	canonical	3	150	junction_2	308.575220435256	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	786	False	NA	24	True	CATAAA	-13	NA	129792592	129795545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129792614_129792747_129792975_129793790_129793931_129794979
Isoform_147057_7	chr5	+	983	4	FSM	ENSMUSG00000034211.15	ENSMUST00000154358.6	514	4	12	-481	3	20	multi-exon	FALSE	canonical	3	15	junction_2	362.116924026849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTTATTGTGTGTGT	778	False	NA	43	True	CATAAA	-32	NA	129792584	129795564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129792614_129792747_129792977_129793790_129793931_129794979
Isoform_147060_45	chr5	+	1791	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	18	373	-5	22	multi-exon	FALSE	canonical	3	460	junction_1	221	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTATTGTGTGTGTGT	786	False	NA	45	True	CATAAA	-34	NA	129792592	129795566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129792614_129792747_129793931_129794979
Isoform_147063_12	chr5	+	1655	4	NNC	ENSMUSG00000034211.15	novel	1208	4	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	356.816790835608	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	786	False	NA	24	True	CATAAA	-13	NA	129792592	129795545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_129792614_129792747_129793676_129793790_129793931_129794979
Isoform_147065_16	chr5	+	736	3	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	7	6	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	423.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCTTGATTTTTCAAAA	782	False	NA	29	True	CATAAA	-18	NA	129792588	129795550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_129792614_129793790_129793931_129794979
Isoform_14707_15	chr11	-	1752	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	29	-406	29	406	multi-exon	TRUE	canonical	3	1037	junction_2	9	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTCTGCTTCTACT	NA	False	NA	NA	False	AATAAA	-15	NA	78441574	78432236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78433623_78434311_78434457_78441353
Isoform_147077_198	chr5	+	2005	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	30	77	-6	0	multi-exon	FALSE	canonical	3	290	junction_9	37.917389085507	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATGTCTAATTTTTAC	7797	False	NA	12	True	AATAAA	-18	NA	129802156	129835314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
Isoform_147078_113	chr5	+	2080	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	31	1	-5	-1	multi-exon	FALSE	canonical	3	290	junction_9	37.917389085507	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTTGCACGATTGAGAC	7798	False	NA	17	True	AATAAA	-16	NA	129802157	129835390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
Isoform_147080_6	chr5	+	1936	9	NIC	ENSMUSG00000029432.13	novel	1600	11	NA	NA	4	0	intron_retention	FALSE	canonical	2	5	junction_7	123.725439481943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATGTCTAATTTTTAC	7771	False	NA	12	True	AATAAA	-18	NA	129802130	129835314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129831905_129831990_129834142
Isoform_147089_3735	chr5	+	2167	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	405	16	405	-16	multi-exon	FALSE	canonical	3	3618	junction_3	465.957308149311	3735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTGGATCATTCACA	NA	False	NA	22	True	AATAAA	-14	NA	129864466	129875196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
Isoform_147090_2387	chr5	+	2198	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	375	15	375	-15	multi-exon	TRUE	canonical	3	3618	junction_3	465.957308149311	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACTGGATCATTCACAC	NA	False	NA	23	True	AATAAA	-15	NA	129864436	129875197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
Isoform_14710_4	chr11	-	3146	12	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-96	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	27.2178235234813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGTTGTCGTTGTTG	NA	False	NA	-15	True	ACTAAA	-15	NA	78588295	78458237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78458569_78459718_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
Isoform_147100_96	chr5	+	2241	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	405	-58	405	58	multi-exon	FALSE	canonical	3	3618	junction_3	465.957308149311	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGGAAGGTCAGAACT	NA	False	NA	3	True	AATAAA	-17	NA	129864466	129875270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
Isoform_14711_5	chr11	-	3341	12	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-53	-6	combination_of_known_junctions	TRUE	canonical	2	3	junction_1	27.2178235234813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATACGTCGCTGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	78588252	78457999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78458569_78459718_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
Isoform_147138_386	chr5	+	1626	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	20	618	-5	0	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875846	129892273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
Isoform_147148_19	chr5	+	1459	8	NIC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	161.455749924471	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875856	129892273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_129875928_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
Isoform_147153_4	chr5	+	2554	5	FSM	ENSMUSG00000034173.14	ENSMUST00000077320.3	730	5	-26	-1798	-16	0	multi-exon	FALSE	canonical	0	0	junction_1	1960.39592620981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	6034	False	NA	NA	False	AATAAA	-17	NA	129924592	129932464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129924694_129927843_129927935_129928023_129928274_129929185_129929337_129930503
Isoform_147154_84	chr5	+	2446	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	40	6	-5	-6	multi-exon	FALSE	canonical	3	34	junction_3	2120.04764097414	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCCTGTCTCAAAAA	6045	False	NA	NA	False	AATAAA	-11	NA	129924603	129932458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
Isoform_147157_76	chr5	+	2888	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-71	-2167	-53	0	multi-exon	FALSE	canonical	3	55	junction_1	420.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970896	130013587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129971069_130007359_130007470_130010981
Isoform_147158_36	chr5	+	4832	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-71	-4111	-53	-2	multi-exon	FALSE	canonical	3	55	junction_1	420.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTGCTGCCATCGTT	NA	False	NA	11	True	AATAAA	-18	NA	129970896	130015531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129971069_130007359_130007470_130010981
Isoform_147166_374	chr5	+	4948	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	110	-1946	-29	0	multi-exon	FALSE	canonical	3	775	junction_1	60.5	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970920	130015533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129971207_130007359_130007470_130010981
Isoform_147168_552	chr5	+	3026	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	86	0	-53	0	multi-exon	FALSE	canonical	3	775	junction_1	60.5	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970896	130013587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129971207_130007359_130007470_130010981
Isoform_147169_16	chr5	+	5002	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	56	-1946	56	0	multi-exon	FALSE	canonical	3	775	junction_1	60.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970866	130015533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129971207_130007359_130007470_130010981
Isoform_147170_27	chr5	+	3053	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	55	4	55	-4	multi-exon	FALSE	canonical	3	775	junction_1	60.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCTGTTGTGTTTTAT	NA	False	NA	40	True	AATATA	-13	NA	129970865	130013583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129971207_130007359_130007470_130010981
Isoform_147187_56	chr5	+	2917	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	-54	1946	-54	0	multi-exon	FALSE	canonical	3	56	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970895	130013587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129971207_130010981
Isoform_147188_22	chr5	+	4859	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	-52	2	-52	-2	multi-exon	FALSE	canonical	3	56	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTGCTGCCATCGTT	NA	False	NA	11	True	AATAAA	-18	NA	129970897	130015531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129971207_130010981
Isoform_147192_379	chr5	+	1479	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	24	-11	3	11	multi-exon	FALSE	canonical	3	269	junction_4	51.2382669496149	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCTGGTATGTTTGTGT	NA	False	NA	16	True	AAAACA	-12	NA	130058154	130089641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
Isoform_147195_56	chr5	+	1368	5	FSM	ENSMUSG00000025532.14	ENSMUST00000202163.4	931	5	10	-447	1	-7	multi-exon	FALSE	canonical	3	60	junction_3	138.212472302611	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGCATGTGCCACCA	NA	False	NA	-2	True	NA	NA	NA	130058152	130089623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130077766_130077825_130088545
Isoform_147197_10	chr5	+	1591	6	FSM	ENSMUSG00000025532.14	ENSMUST00000156729.2	669	6	-52	-870	1	13	multi-exon	FALSE	canonical	3	25	junction_1	131.765549367048	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTATGTTTGTGTGT	NA	False	NA	18	True	AAAACA	-14	NA	130058131	130089643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130058336_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
Isoform_147199_6	chr5	+	1449	5	NIC	ENSMUSG00000025532.14	novel	669	6	NA	NA	7	10	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	170.510080347175	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATACCTGGTATGTTTGTG	NA	False	NA	15	True	AAAACA	-11	NA	130058175	130089640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_130058336_130063752_130063790_130066660_130066760_130077766_130077825_130088545
Isoform_147200_282	chr5	+	2023	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	27	0	27	0	multi-exon	FALSE	canonical	3	139	junction_2	10.899541274751	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATGGTCCCGTTTTCAG	NA	False	NA	17	True	AATAAA	-18	NA	130108237	130164570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
Isoform_147201_3	chr5	+	2045	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	0	5	0	-5	multi-exon	FALSE	canonical	3	139	junction_2	10.899541274751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTCAATGGTCCCGTT	NA	False	NA	12	True	AATAAA	-13	NA	130108210	130164565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
Isoform_147202_3	chr5	+	2217	6	NNC	ENSMUSG00000034118.16	novel	2050	6	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.196835363806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTCAATGGTCCCGTTT	NA	False	NA	13	True	AATAAA	-14	NA	130108237	130164566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130163850
Isoform_147203_3	chr5	+	2157	6	NNC	ENSMUSG00000034118.16	novel	2050	6	NA	NA	90	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.196835363806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAATGGTCCCGTTTTCA	NA	False	NA	16	True	AATAAA	-17	NA	130108300	130164569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130163850
Isoform_147205_4	chr5	+	3652	4	NIC	ENSMUSG00000034110.9	novel	4291	4	NA	NA	17	-699	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	8.9566858950296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGAAGTAGTTTGGCC	1872	False	NA	NA	False	AATAAA	-11	NA	130173718	130183948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_130174068_130176817_130177065_130180511_130180691_130181071
Isoform_147208_41	chr5	+	3576	4	FSM	ENSMUSG00000034110.9	ENSMUST00000040616.9	4291	4	24	691	24	-691	multi-exon	FALSE	canonical	3	21	junction_2	1.88561808316413	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTTTGGCCTGTTTGAT	1879	False	NA	NA	False	AATAAA	-19	NA	130173725	130183956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130174068_130176894_130177065_130180511_130180691_130181071
Isoform_147210_203	chr5	+	2645	9	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	15	-2	intron_retention	FALSE	canonical	3	67	junction_3	37.9637985454564	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATTGGTTTTGTTTT	NA	False	NA	14	True	AATAAA	-36	NA	130200679	130243176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
Isoform_147217_106	chr5	+	2638	9	FSM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	45	7	19	-2	multi-exon	FALSE	canonical	3	81	junction_3	33.6962535009458	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATTGGTTTTGTTTT	NA	False	NA	14	True	AATAAA	-36	NA	130200683	130243176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130200736_130216241_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
Isoform_147222_6	chr5	+	2475	8	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	15	-2	intron_retention	FALSE	canonical	1	2	junction_3	62.0388291840732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATTGGTTTTGTTTT	NA	False	NA	14	True	AATAAA	-36	NA	130200679	130243176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
Isoform_147226_973	chr5	+	3567	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	0	3	0	-3	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTTTGCCGTTTTAA	9017	False	NA	11	True	AATAAA	-12	NA	130251175	130272504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
Isoform_147228_132	chr5	+	3593	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	-24	1	-24	-1	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGCCGTTTTAATT	8993	False	NA	13	True	AATAAA	-14	NA	130251151	130272506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
Isoform_147242_142	chr5	+	2501	16	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	2	-409	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	68.4530658350831	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTACTGGCTTTGTCCT	3514	False	NA	17	True	AATAAA	-20	NA	130284461	130369995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
Isoform_147250_793	chr5	+	2612	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	26	406	26	-406	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	4954	False	NA	20	True	AATAAA	-23	NA	130285901	130369998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
Isoform_147251_37	chr5	+	3017	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	26	1	26	-1	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGACATGTTCCCATGCT	4954	False	NA	NA	False	AATAAA	-16	NA	130285901	130370403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
Isoform_147252_25	chr5	+	3390	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	26	-372	26	372	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGGCTGTTACATTGC	4954	False	NA	NA	False	NA	NA	NA	130285901	130370776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
Isoform_147266_21	chr5	+	4775	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	6	2586	6	-2573	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134128555	134170596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
Isoform_14727_41	chr11	-	4532	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-97	9	-97	-9	multi-exon	FALSE	canonical	3	79	junction_6	8.57962703152066	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACAATACGTCGCTGT	NA	False	NA	-10	True	ATTAAA	-10	NA	78588296	78458002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
Isoform_147270_4	chr5	+	7342	10	NNC	ENSMUSG00000015944.10	novel	7367	9	NA	NA	-14	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	3.29234053111757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATGTTGCCTGATA	NA	False	NA	NA	False	ATTAAA	-10	NA	134128535	134173164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067_134170606_134170626
Isoform_147271_21	chr5	+	3474	16	FSM	ENSMUSG00000015942.10	ENSMUST00000016086.10	3482	16	2	6	2	-6	multi-exon	FALSE	canonical	1	3	junction_8	3.05505046330389	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTGTGTGTGTTTGTG	NA	False	NA	4	True	AATAAA	-11	NA	134212867	134246982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134213098_134220018_134220117_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244977
Isoform_147274_46	chr5	+	1913	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	68	3014	1	463	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTGTTGTTGTTTT	NA	False	NA	NA	False	TTTAAA	-20	NA	134611611	134627645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
Isoform_147275_1404	chr5	+	1441	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	77	3477	10	0	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611620	134627182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
Isoform_147282_38	chr5	+	3432	10	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1115	junction_6	101.321271211923	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611598	134627182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
Isoform_147284_24	chr5	+	1584	12	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	502.73133320734	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGCTATGCTTAATTG	NA	False	NA	18	True	GATAAA	-14	NA	134611604	134627181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619491_134619620_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
Isoform_147289_46	chr5	+	1398	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	5	1405	0	0	multi-exon	FALSE	canonical	3	37	junction_1	28.2460616723819	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGTGTGTACTGTAA	3417	False	NA	4	True	NA	NA	NA	134961226	134970086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147291_17	chr5	+	1200	7	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	36.2583323756991	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3419	False	NA	6	True	NA	NA	NA	134961228	134970088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
Isoform_147292_15	chr5	+	1297	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111219.8	1790	6	2	491	2	0	multi-exon	FALSE	canonical	2	10	junction_1	38.8947297201048	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGTGTGTACTGTAA	3419	False	NA	4	True	NA	NA	NA	134961228	134970086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134961265_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147293_16	chr5	+	1404	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111218.8	1387	6	15	-32	1	2	multi-exon	FALSE	canonical	3	11	junction_1	38.4988311510882	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3451	False	NA	6	True	NA	NA	NA	134961260	134970088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134961303_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147295_6	chr5	+	1419	6	FSM	ENSMUSG00000040557.15	ENSMUST00000201847.3	721	6	-127	-571	5	3	multi-exon	FALSE	canonical	3	6	junction_1	40.4791304254427	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAATAAAAATACAA	3441	False	NA	19	True	NA	NA	NA	134961250	134970059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134961436_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147296_3	chr5	+	2004	6	FSM	ENSMUSG00000040557.15	ENSMUST00000201847.3	721	6	-152	-1131	-1	42	multi-exon	FALSE	canonical	3	6	junction_1	40.4791304254427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGGGGTGATCTGA	3416	False	NA	NA	False	AATAAA	-11	NA	134961225	134970619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134961436_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147298_23	chr5	+	1606	5	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	98	junction_4	6.17960354715414	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGTGTGTACTGTAA	3420	False	NA	4	True	NA	NA	NA	134961229	134970086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147299_3	chr5	+	2135	5	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	-3	44	intron_retention	FALSE	canonical	3	98	junction_4	6.17960354715414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGGGTGATCTGATT	3426	False	NA	NA	False	AATAAA	-13	NA	134961235	134970621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147300_3	chr5	+	2859	5	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	-1	-156	intron_retention	FALSE	canonical	3	98	junction_4	6.17960354715414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATGTAGAGCACTTTG	3416	False	NA	NA	False	NA	NA	NA	134961225	134971335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147301_4	chr5	+	1379	6	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	24	junction_5	33.3610551391889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GATACAGAAAAAAAATAAAA	3416	False	NA	13	True	NA	NA	NA	134961225	134970053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
Isoform_147302_14	chr5	+	2214	4	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	-10	-5	intron_retention	FALSE	canonical	3	98	junction_3	4.92160768674447	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3402	False	NA	11	True	NA	NA	NA	134961211	134970051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147303_3	chr5	+	2752	4	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	-3	43	intron_retention	FALSE	canonical	3	98	junction_3	4.92160768674447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGGGGTGATCTGAT	3433	False	NA	NA	False	AATAAA	-12	NA	134961242	134970620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_147304_3	chr5	+	2521	2	NIC	ENSMUSG00000040557.15	novel	1796	5	NA	NA	-1	43	intron_retention	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGGGGTGATCTGAT	3435	False	NA	NA	False	AATAAA	-12	NA	134961244	134970620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_134962456_134969310
Isoform_147306_429	chr5	+	1112	6	FSM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	375	6	-17	-1	multi-exon	FALSE	canonical	3	445	junction_1	65.8634952003004	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGATCCGTTTTCAC	NA	False	NA	9	True	AATAAA	-16	NA	135038527	135041023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
Isoform_14731_4	chr11	-	1539	11	FSM	ENSMUSG00000001123.16	ENSMUST00000108269.10	1586	11	47	0	-46	0	multi-exon	FALSE	canonical	2	4	junction_6	7.48398289682706	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGTGAGATGGCTGGC	NA	False	NA	-2	True	AATAAA	-24	NA	78875703	78853804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78860539_78860633_78862142_78862254_78863813_78864016_78867438_78867528_78875603
Isoform_147311_15	chr5	+	1736	2	ISM	ENSMUSG00000040532.15	ENSMUST00000149778.2	1475	3	-42	2	-27	-2	intron_retention	FALSE	canonical	3	589	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038517	135041022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_135038972_135039740
Isoform_147314_64	chr5	+	1264	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	208	1	-27	-1	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGATCCGTTTTCAC	NA	False	NA	9	True	AATAAA	-16	NA	135038517	135041023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
Isoform_14732_17	chr11	-	1460	10	FSM	ENSMUSG00000001123.16	ENSMUST00000108268.10	1520	10	56	4	34	1	multi-exon	FALSE	canonical	3	15	junction_9	3.82970843102535	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGAGATGGCTGGCT	NA	False	NA	-1	True	AATAAA	-25	NA	78875716	78853803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
Isoform_147322_14	chr5	+	1412	4	NIC	ENSMUSG00000040532.15	novel	1473	5	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	552	junction_2	38.6637929966641	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038517	135041022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_135038972_135039740_135040235_135040337_135040520_135040740
Isoform_147323_8	chr5	+	1488	3	FSM	ENSMUSG00000040532.15	ENSMUST00000149778.2	1475	3	-14	1	1	-1	multi-exon	FALSE	canonical	3	589	junction_1	28.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGATCCGTTTTCAC	NA	False	NA	9	True	AATAAA	-16	NA	135038545	135041023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135038972_135039740_135040520_135040740
Isoform_147324_4	chr5	+	2143	10	NNC	ENSMUSG00000007207.11	novel	2162	10	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	4.42495727816442	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCTGTTTGGAACA	NA	False	NA	15	True	AATAAA	-15	NA	135052389	135079954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_135052465_135065979_135066058_135066329_135066430_135070090_135070166_135070784_135070859_135070962_135071072_135071446_135071521_135074450_135074589_135077564_135077711_135078680
Isoform_147325_4	chr5	+	2218	10	FSM	ENSMUSG00000007207.11	ENSMUST00000150838.2	2167	10	-52	1	1	0	multi-exon	FALSE	canonical	3	9	junction_4	7.53428378140653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCCTCTGTTTGGAAC	NA	False	NA	14	True	AATAAA	-14	NA	135052361	135079953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135052465_135065979_135066058_135066329_135066430_135070090_135070166_135070784_135070859_135070962_135071072_135071446_135071521_135074450_135074589_135077764_135077959_135078680
Isoform_147328_17	chr5	+	1661	4	ISM	ENSMUSG00000007207.11	ENSMUST00000156626.8	2114	7	1552	-1	1346	0	3prime_fragment	FALSE	canonical	3	18	junction_1	6.12825877028341	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCTGTTTGGAACA	7228	False	NA	15	True	AATAAA	-15	NA	135071465	135079954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_135071521_135074450_135074589_135077764_135077959_135078680
Isoform_147329_17	chr5	+	3197	17	FSM	ENSMUSG00000005373.14	ENSMUST00000005507.10	3622	17	-31	456	-4	4	multi-exon	FALSE	canonical	2	15	junction_13	3.60067268020852	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGGTGTTGGTGTGAC	3403	False	NA	5	True	AATAAA	-18	NA	135135740	135166780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
Isoform_14733_7	chr11	-	1515	10	FSM	ENSMUSG00000001123.16	ENSMUST00000108268.10	1520	10	1	4	1	1	multi-exon	FALSE	canonical	3	15	junction_9	3.82970843102535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGAGATGGCTGGCT	NA	False	NA	-1	True	AATAAA	-25	NA	78875771	78853803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
Isoform_147330_5	chr5	+	3466	17	FSM	ENSMUSG00000005373.14	ENSMUST00000005507.10	3622	17	-26	182	1	-182	multi-exon	FALSE	canonical	2	15	junction_13	3.60067268020852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCCCTTTGAGTACTT	3408	False	NA	NA	False	NA	NA	NA	135135745	135167054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
Isoform_147332_3	chr5	+	3315	16	NIC	ENSMUSG00000005373.14	novel	3344	16	NA	NA	-2	0	intron_retention	FALSE	canonical	2	15	junction_12	3.71423687391577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGGGTTGGTGTTGGTG	3416	False	NA	1	True	AATAAA	-14	NA	135135753	135166776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
Isoform_147333_15	chr5	+	4508	8	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	3	2846	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	100.646278964439	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGATTCTTTGCTTGT	9527	False	NA	8	True	NA	NA	NA	135178547	135191521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_135178719_135178843_135178994_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
Isoform_147335_458	chr5	+	4365	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	30	3093	1	2846	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGATTCTTTGCTTGT	9520	False	NA	8	True	NA	NA	NA	135178540	135191521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
Isoform_147338_58	chr5	+	5571	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	29	1888	0	-1888	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGACTCCCTGGTGGT	9519	False	NA	15	True	NA	NA	NA	135178539	135192726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
Isoform_14734_3	chr11	-	3172	4	ISM	ENSMUSG00000018334.19	ENSMUST00000018478.11	5495	19	125648	0	-349	0	3prime_fragment	FALSE	canonical	3	12	junction_1	12.3917535302941	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGACTCCTGTTTGTT	NA	False	NA	-5	True	AATAAA	-14	NA	78911585	78904265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507
Isoform_147348_20	chr5	+	543	3	FSM	ENSMUSG00000029681.13	ENSMUST00000111187.10	564	3	14	7	-9	-7	multi-exon	FALSE	canonical	3	101	junction_2	118	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATCCTAAAGTGTCT	8789	False	NA	NA	False	NA	NA	NA	135197256	135202295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135197453_135199940_135200017_135202024
Isoform_14735_4	chr11	-	3450	18	NIC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-79	1477	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	9.7916001003897	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCAGCGGCTTCTAGA	NA	False	NA	NA	False	AAAAAG	-9	NA	79037312	78906384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
Isoform_147350_311	chr5	+	1669	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	86	3	-20	-3	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGACAGCTTCTTTCT	8755	False	NA	26	True	ATTAAA	-21	NA	135197222	135210706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
Isoform_147351_25	chr5	+	1710	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	48	0	48	0	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACAGCTTCTTTCTACA	8717	False	NA	29	True	ATTAAA	-24	NA	135197184	135210709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
Isoform_147365_8	chr5	+	4242	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-5	26580	-5	1492	5prime_fragment	FALSE	canonical	3	180	junction_5	21.0765799460496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTTGTATTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	135216112	135248403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443
Isoform_147368_292	chr5	+	6492	19	FSM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-5	5	-5	-5	multi-exon	FALSE	canonical	3	180	junction_5	50.9896201008077	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAGACAGCTTTGATG	NA	False	NA	36	True	AATAAA	-39	NA	135216112	135274978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
Isoform_147373_6	chr5	+	6881	19	FSM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-389	0	-389	0	multi-exon	FALSE	canonical	3	180	junction_5	50.9896201008077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	False	NA	41	True	AATAAA	-44	NA	135215728	135274983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
Isoform_147375_10	chr5	+	4786	18	NIC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	80.8633346624634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGACAGCTTTGAT	NA	False	NA	35	True	AATAAA	-38	NA	135216112	135274977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
Isoform_14738_4	chr11	-	3148	19	NIC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-135	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	11.296372191609	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTGGCTCTTGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	79037368	78907857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
Isoform_14739_10	chr11	-	3080	19	NIC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-66	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	11.296372191609	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGCTCTTGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	79037299	78907856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
Isoform_14741_22	chr11	-	3038	18	NIC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-66	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	9.61328377369018	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGCTCTTGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	79037299	78907856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
Isoform_147418_114	chr5	+	2240	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	3	0	3	0	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGTTTAAATATTT	NA	False	NA	NA	False	AATAAA	-12	NA	135398809	135405652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
Isoform_147419_741	chr5	+	1585	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	3	655	3	0	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCACAGTTTTATT	NA	False	NA	18	True	AATAAA	-18	NA	135398809	135404997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
Isoform_14742_3	chr11	-	6646	19	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-111	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.3016987688457	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGACTCCTGTTTGTT	NA	False	NA	-5	True	AATAAA	-14	NA	79037344	78904265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_78906379_78906406_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
Isoform_147424_23	chr5	+	1694	11	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	113.163421652051	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCACAGTTTTATT	NA	False	NA	18	True	AATAAA	-18	NA	135398823	135404997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402104_135402228_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
Isoform_147425_14	chr5	+	1545	10	NIC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	87.7620239027461	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGATCACAGTTTTATTT	NA	False	NA	19	True	AATAAA	-19	NA	135398842	135404998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400359_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
Isoform_147428_7	chr5	+	2373	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	66	1924	-3	-3	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTTTCTTTTTAGTA	NA	False	NA	NA	False	NA	NA	NA	135661573	135673378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
Isoform_147429_65	chr5	+	2011	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	52	2300	2	-379	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGTGGCATACTGTG	NA	False	NA	17	True	TATAAA	-21	NA	135661559	135673002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
Isoform_147433_338	chr5	+	1877	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	102	2228	-3	-379	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGTGGCATACTGTG	NA	False	NA	17	True	TATAAA	-21	NA	135661573	135673002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
Isoform_147434_11	chr5	+	4208	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	72	-73	-14	1	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGCATGGCCT	NA	False	NA	NA	False	NA	NA	NA	135661543	135675303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
Isoform_147435_51	chr5	+	2251	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	102	1854	-3	-5	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGAATTTTCTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	135661573	135673376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
Isoform_147438_24	chr5	+	1484	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	73	2650	-13	-801	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATCTGTGTTGTTTCA	NA	False	NA	NA	False	GATAAA	-5	NA	135661544	135672580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
Isoform_147440_15	chr5	+	4034	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	102	71	-3	-71	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCCTGCCCTGGCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	135661573	135675159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
Isoform_147446_1371	chr5	+	2474	16	FSM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	161	1	39	-1	multi-exon	FALSE	canonical	3	231	junction_9	23.2776478384069	1371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGGTGTTGATTGA	2062	False	NA	13	True	AATAAA	-13	NA	135718050	135764179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
Isoform_147461_176	chr5	+	1308	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	147	1	-9	-1	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTGTAGATTTCCTT	600	False	NA	37	True	AGTAAA	-24	NA	135807480	135819244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
Isoform_147463_7107	chr5	+	1280	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	175	1	-7	-1	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	7107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTGTAGATTTCCTT	628	False	NA	37	True	AGTAAA	-24	NA	135807508	135819244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
Isoform_147487_1396	chr5	+	815	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	83	5	-16	-3	multi-exon	FALSE	canonical	3	2181	junction_2	11	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGTCTGACTCCAGAGT	NA	False	NA	2	True	AATAAA	-20	NA	135916855	135918412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135917289_135917902_135917967_135918094
Isoform_147488_403	chr5	+	851	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	47	5	47	-3	multi-exon	FALSE	canonical	3	2181	junction_2	11	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGTCTGACTCCAGAGT	NA	False	NA	2	True	AATAAA	-20	NA	135916819	135918412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135917289_135917902_135917967_135918094
Isoform_147489_67	chr5	+	929	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	-31	5	-31	-3	multi-exon	FALSE	canonical	3	2181	junction_2	11	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGTCTGACTCCAGAGT	NA	False	NA	2	True	AATAAA	-20	NA	135916741	135918412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135917289_135917902_135917967_135918094
Isoform_14749_6	chr11	-	3539	10	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	151.935983920454	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTACATTGCCGATA	969	False	NA	-28	True	ATTAAA	-8	NA	79145503	79130217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79133324_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_147493_11	chr5	+	1315	8	FSM	ENSMUSG00000004948.13	ENSMUST00000005073.13	1323	8	8	0	8	0	multi-exon	TRUE	canonical	3	12	junction_4	3.97953950776689	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGTGGTTTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	136008960	136017478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136009297_136011492_136011612_136013015_136013120_136013201_136013386_136014398_136014517_136016108_136016201_136016325_136016463_136017253
Isoform_147495_129	chr5	+	2598	11	FSM	ENSMUSG00000004947.16	ENSMUST00000111142.9	2650	11	45	7	1	1	multi-exon	TRUE	canonical	3	47	junction_6	35.5758344947803	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATCTGTTGGGAAGT	8504	False	NA	9	True	AATAAA	-14	NA	136023698	136061719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
Isoform_147496_344	chr5	+	2459	10	FSM	ENSMUSG00000004947.16	ENSMUST00000111145.10	2493	10	40	-6	4	-1	multi-exon	FALSE	canonical	3	84	junction_5	18.5279235376575	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTGGGAAGTTTTGT	8510	False	NA	14	True	AATAAA	-19	NA	136023704	136061724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
Isoform_14750_55	chr11	-	2631	10	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	142.650916403006	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTACATTGCCGATA	976	False	NA	-28	True	ATTAAA	-8	NA	79145496	79130217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134225_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_147504_8	chr5	+	2581	18	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	11	5827	11	0	5prime_fragment	FALSE	canonical	3	36	junction_7	11.2922792621444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATGTGTACGTGTGTGAG	2163	False	NA	NA	False	AATAAA	-18	NA	136112780	136134887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457
Isoform_147505_243	chr5	+	2881	21	FSM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	32	1	-6	-1	multi-exon	FALSE	canonical	3	36	junction_7	10.6273232754067	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGAGGTGTTGGGTTGG	2184	False	NA	NA	False	AATAAA	-19	NA	136112801	136140713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
Isoform_147506_3	chr5	+	2711	20	NIC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_18	16.5475893918553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGCTGAGGTGTTGGGT	2230	False	NA	NA	False	AATAAA	-16	NA	136112847	136140710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136140105_136140171_136140284
Isoform_147507_29	chr5	+	3112	20	FSM	ENSMUSG00000004952.14	ENSMUST00000135344.8	3057	20	-51	-4	-7	-1	multi-exon	TRUE	canonical	3	36	junction_7	10.66669552166	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGAGGTGTTGGGTTGG	2183	False	NA	NA	False	AATAAA	-19	NA	136112800	136140713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
Isoform_147509_3	chr5	+	2142	14	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	14704	1	3030	-1	3prime_fragment	FALSE	canonical	3	51	junction_3	8.16617355513244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGAGGTGTTGGGTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	136127473	136140713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
Isoform_147512_512	chr5	+	578	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	68	0	-3	0	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9280	False	NA	30	True	AATAAA	-19	NA	136145552	136151801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
Isoform_147515_134	chr5	+	1748	3	FSM	ENSMUSG00000039754.11	ENSMUST00000041100.4	1773	3	24	1	20	-1	multi-exon	FALSE	canonical	3	62	junction_2	0.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGAATTTCTCCTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	136165031	136170465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136165149_136168191_136168390_136169032
Isoform_147517_5	chr5	+	1809	3	FSM	ENSMUSG00000039754.11	ENSMUST00000143229.2	641	3	-61	-1107	-5	-2	multi-exon	FALSE	canonical	1	2	junction_2	30.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATTTCTCCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	136164994	136170464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136165149_136168191_136168415_136169032
Isoform_147518_33	chr5	+	1654	3	FSM	ENSMUSG00000039754.11	ENSMUST00000136634.8	557	3	3	-1100	3	0	multi-exon	FALSE	canonical	3	9	junction_1	26.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATTTCTCCTTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	136165002	136170466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136165149_136168315_136168390_136169032
Isoform_147519_19	chr5	+	1887	3	FSM	ENSMUSG00000039754.11	ENSMUST00000125923.2	1040	3	-12	-835	0	1	multi-exon	FALSE	canonical	2	7	junction_1	27.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAATTTCTCCTTTTCCC	NA	False	NA	NA	False	AATAAA	-24	NA	136164999	136170467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136165254_136168191_136168390_136169032
Isoform_147520_63	chr5	+	903	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	8	2160	8	63	multi-exon	FALSE	canonical	3	57	junction_4	11.0989864402116	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTAGCACTGTGTTTTC	4063	False	NA	6	True	NA	NA	NA	136937011	136942098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
Isoform_147521_5	chr5	+	2188	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	-10	893	-10	-893	multi-exon	FALSE	canonical	3	57	junction_4	11.0989864402116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGACCAGTTTCCTG	4045	False	NA	NA	False	NA	NA	NA	136936993	136943365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
Isoform_147523_4	chr5	+	812	4	FSM	ENSMUSG00000097908.8	ENSMUST00000197095.5	617	4	-186	-9	-15	9	multi-exon	FALSE	canonical	3	66	junction_3	17.326921891156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGGTCTACTTATACC	NA	False	NA	NA	False	NA	NA	NA	136948019	136962548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962315
Isoform_147525_153	chr5	+	3755	4	FSM	ENSMUSG00000097908.8	ENSMUST00000181045.8	3967	4	219	-7	13	1	multi-exon	FALSE	canonical	3	48	junction_3	24.0878023535196	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGCTTTTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-20	NA	136948218	136965967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962592
Isoform_147526_10	chr5	+	3953	4	FSM	ENSMUSG00000097908.8	ENSMUST00000181045.8	3967	4	20	-6	-15	0	multi-exon	FALSE	canonical	3	48	junction_3	24.0878023535196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGCTTTTTTGTTTTG	NA	False	NA	30	True	AATAAA	-19	NA	136948019	136965966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962592
Isoform_147528_137	chr5	+	940	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	7	1	7	-1	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCTGTGTGTGAGCGA	4058	False	NA	17	True	AATAAA	-18	NA	136982135	136995085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
Isoform_147529_5	chr5	+	1049	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	-100	-1	-100	1	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTGTGAGCGAGC	3951	False	NA	19	True	AATAAA	-20	NA	136982028	136995087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
Isoform_147532_29	chr5	+	809	4	FSM	ENSMUSG00000019054.14	ENSMUST00000111097.8	601	4	-124	-84	7	1	multi-exon	FALSE	canonical	3	58	junction_1	234.963827003222	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTGTGAGCGAGC	4058	False	NA	19	True	AATAAA	-20	NA	136982135	136995087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136982445_136993946_136994024_136994418_136994525_136994770
Isoform_147534_294	chr5	+	753	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	32	1	32	1	multi-exon	FALSE	canonical	3	370	junction_1	76.6823806359714	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTGTGAGCGAGC	3300	False	NA	19	True	AATAAA	-20	NA	136990962	136995087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
Isoform_147537_263	chr5	+	2595	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	575	110	118	-110	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGAGTCCGTGAGTCC	NA	False	NA	12	True	AATAAA	-13	NA	137016447	137025392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
Isoform_147538_202	chr5	+	2922	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	254	104	-105	-104	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCGTGAGTCCAATATA	NA	False	NA	18	True	AATAAA	-19	NA	137016126	137025398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
Isoform_147540_30	chr5	+	2702	19	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	117	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	44.6083436252418	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTATTTGTGAGTGT	NA	False	NA	119	True	ATTAAA	-21	NA	137016446	137025499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023912_137024959
Isoform_147541_11	chr5	+	3003	19	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-97	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	44.6083436252418	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATCTGCAAAATATTTA	NA	False	NA	108	True	ATTAAA	-10	NA	137016134	137025488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023912_137024959
Isoform_147543_17	chr5	+	2955	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	223	102	-136	-102	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCGTGAGTCCAATATAAA	NA	False	NA	20	True	AATAAA	-21	NA	137016095	137025400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
Isoform_147546_9	chr5	+	3183	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	-14	111	-14	-111	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGAGTCCGTGAGTC	NA	False	NA	11	True	AATAAA	-12	NA	137015858	137025391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
Isoform_147552_79	chr5	+	4342	17	FSM	ENSMUSG00000029710.16	ENSMUST00000111055.9	4296	17	-61	15	2	-15	multi-exon	FALSE	canonical	3	39	junction_6	71.8852166651809	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGATATGTCTCAGTCC	NA	False	NA	4	True	AATAAA	-7	NA	137348372	137372767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
Isoform_147557_573	chr5	+	4315	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	2	23	2	-15	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGATATGTCTCAGTCC	NA	False	NA	4	True	AATAAA	-7	NA	137348372	137372767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
Isoform_14756_234	chr11	-	2455	9	FSM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	1	20	-1	-4	multi-exon	FALSE	canonical	3	217	junction_4	86.5338625914734	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTACATTGCCGATA	976	False	NA	-28	True	ATTAAA	-8	NA	79145496	79130217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_147560_24	chr5	+	4397	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	-80	23	-80	-15	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGATATGTCTCAGTCC	NA	False	NA	4	True	AATAAA	-7	NA	137348290	137372767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
Isoform_14759_96	chr11	-	3883	9	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	5	intron_retention	FALSE	canonical	3	190	junction_4	93.9730679503442	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCGATATTTCTTTCA	976	False	NA	-19	True	ATTAAA	-17	NA	79145496	79130208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_147590_11	chr5	+	5980	27	Fusion	ENSMUSG00000106237.2_ENSMUSG00000029714.12	novel	5440	24	NA	NA	186	0	multi-exon	FALSE	canonical	0	0	junction_23	18.3778552102844	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTGCCAGCTTTTCC	NA	False	NA	29	True	AATAAA	-24	NA	137508700	137526197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
Isoform_147592_4	chr5	+	5975	27	Fusion	ENSMUSG00000106237.2_ENSMUSG00000029714.12	novel	5440	24	NA	NA	186	-2	multi-exon	TRUE	canonical	0	0	junction_23	19.3589955849773	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTCTGCCAGCTTTT	NA	False	NA	27	True	AATAAA	-22	NA	137508700	137526195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522915_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
Isoform_147593_11	chr5	+	2631	17	ISM	ENSMUSG00000029716.14	ENSMUST00000198783.5	2973	18	577	0	-69	0	3prime_fragment	FALSE	canonical	1	1	junction_5	2.24913177693082	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATTTAGCTTCCTCTTC	5109	False	NA	NA	False	AATAAA	-26	NA	137569643	137585738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575719_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137580934_137581019_137581084_137581180_137581249_137581335_137581413_137581492_137581578_137581666_137581895_137582187_137582329_137585090
Isoform_147594_280	chr5	+	3021	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	59	-2	2	2	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTGTGTGCCTGCCTG	2243	False	NA	27	True	AATAAA	-29	NA	137627441	137639358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
Isoform_147596_86	chr5	+	3071	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	13	-6	-9	1	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCCTGCCTGTCCA	2197	False	NA	31	True	AATAAA	-33	NA	137627395	137639362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
Isoform_147598_11	chr5	+	4502	22	FSM	ENSMUSG00000029720.10	ENSMUST00000177545.2	4464	22	-41	3	-41	-3	multi-exon	FALSE	canonical	3	204	junction_21	33.9740463834439	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTCTGCAGTG	2197	False	NA	20	True	AATAAA	-12	NA	137627395	137641158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
Isoform_147599_36	chr5	+	4456	22	FSM	ENSMUSG00000029720.10	ENSMUST00000177545.2	4464	22	5	3	5	-3	multi-exon	FALSE	canonical	3	204	junction_21	33.9740463834439	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTCTGCAGTG	2243	False	NA	20	True	AATAAA	-12	NA	137627441	137641158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
Isoform_147607_17	chr5	+	1085	6	FSM	ENSMUSG00000079165.11	ENSMUST00000177466.8	1005	6	-51	-29	-51	-2	multi-exon	FALSE	canonical	3	122	junction_1	39.5858560599616	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGCTGTCTGCAGTGG	1050	False	NA	21	True	AATAAA	-13	NA	137639544	137641159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137639819_137639983_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
Isoform_147608_86	chr5	+	1054	6	FSM	ENSMUSG00000079165.11	ENSMUST00000177466.8	1005	6	-20	-29	-20	-2	multi-exon	FALSE	canonical	3	122	junction_1	39.5858560599616	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGCTGTCTGCAGTGG	1081	False	NA	21	True	AATAAA	-13	NA	137639575	137641159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137639819_137639983_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
Isoform_147613_3	chr5	+	1414	3	FSM	ENSMUSG00000079165.11	ENSMUST00000176256.2	414	3	-650	-350	-40	-2	multi-exon	FALSE	canonical	3	204	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGCTGTCTGCAGTGG	1061	False	NA	21	True	AATAAA	-13	NA	137639555	137641159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137640497_137640602_137640701_137640784
Isoform_147616_1296	chr5	+	2305	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	18	1660	18	200	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGAGGTTGGTGTGCTG	NA	False	NA	12	True	ATTAAA	-23	NA	137744275	137758010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
Isoform_147617_129	chr5	+	2590	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	-270	1663	-4	197	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATGGAGGTTGGTGTG	NA	False	NA	9	True	ATTAAA	-20	NA	137743987	137758007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
Isoform_14762_34	chr11	-	4758	8	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	1	-5	intron_retention	FALSE	canonical	3	351	junction_6	53.3008404421238	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACTACATTGCCGAT	978	False	NA	-29	True	ATTAAA	-7	NA	79145494	79130218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_147630_11	chr5	+	1139	2	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	-17	5	-17	-1	intron_retention	FALSE	canonical	3	301	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777148	137778367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_137777484_137777563
Isoform_147631_91	chr5	+	1031	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	11	5	11	-1	intron_retention	FALSE	canonical	3	301	junction_1	64	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777176	137778367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_137777484_137777563_137777808_137777887
Isoform_147632_691	chr5	+	925	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	26	5	26	-1	multi-exon	FALSE	canonical	3	301	junction_1	53.8970211504206	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777191	137778367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
Isoform_147633_10	chr5	+	1005	3	NIC	ENSMUSG00000029725.11	novel	956	4	NA	NA	26	-1	intron_retention	FALSE	canonical	3	301	junction_1	46	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777191	137778367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_137777484_137777563_137778025_137778115
Isoform_147634_12	chr5	+	1021	3	NIC	ENSMUSG00000029725.11	novel	956	4	NA	NA	11	0	intron_retention	FALSE	canonical	3	393	junction_2	18	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACCGAACTGTTCTT	NA	False	NA	1	True	AATAAA	-14	NA	137777176	137778368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_137777808_137777887_137778025_137778115
Isoform_147636_13	chr5	+	1103	2	FSM	ENSMUSG00000029725.11	ENSMUST00000152298.2	476	2	-630	3	10	1	multi-exon	FALSE	canonical	3	393	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCGAACTGTTCTTG	NA	False	NA	2	True	AATAAA	-15	NA	137777175	137778369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137778025_137778115
Isoform_147638_34	chr5	+	2199	17	FSM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	16	7	16	-7	multi-exon	FALSE	canonical	3	53	junction_4	16.2498798072478	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTGTGCTTTGTG	7093	False	NA	25	True	AATAAA	-18	NA	137786075	137820876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
Isoform_147640_8	chr5	+	2079	16	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	53	-6	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	25.4046364972136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTGTGCTTTGTGT	7130	False	NA	26	True	AATAAA	-19	NA	137786112	137820877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
Isoform_147641_5	chr5	+	2145	16	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	-14	-7	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	25.4046364972136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTGTGCTTTGTG	7063	False	NA	25	True	AATAAA	-18	NA	137786045	137820876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
Isoform_147642_6	chr5	+	3685	17	NNC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	41	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.3028530999965	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCTGTGCTTTGTGTG	7118	False	NA	27	True	AATAAA	-20	NA	137786100	137820878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796809_137796833_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
Isoform_147643_3	chr5	+	3728	17	NNC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.3028530999965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTGTGCTTTGTG	7063	False	NA	25	True	AATAAA	-18	NA	137786045	137820876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796810_137796844_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
Isoform_147645_3	chr5	+	4535	4	FSM	ENSMUSG00000029729.13	ENSMUST00000066617.12	8042	4	29	3478	-7	-147	multi-exon	FALSE	canonical	2	3	junction_3	5.09901951359278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATATGTGTAGAGAGAC	NA	False	NA	NA	False	ATTAAA	-19	NA	138083374	138102606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138098851
Isoform_147646_90	chr5	+	2227	5	FSM	ENSMUSG00000037017.16	ENSMUST00000062350.15	2252	5	27	-2	-7	1	multi-exon	FALSE	canonical	3	41	junction_1	46.7566840141599	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCGTCTCAGGACTGTTA	NA	False	NA	5	True	AATAAA	-14	NA	138115191	138132477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138115251_138116097_138116183_138123239_138123953_138124715_138124909_138131300
Isoform_147647_53	chr5	+	2184	4	FSM	ENSMUSG00000037017.16	ENSMUST00000080732.10	2134	4	-8	-42	-8	-9	multi-exon	FALSE	canonical	3	30	junction_1	59.1626759217517	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTTTTATGTATT	NA	False	NA	46	True	GATAAA	-12	NA	138115190	138132518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138115251_138123239_138123953_138124715_138124909_138131300
Isoform_147649_166	chr5	+	2245	5	FSM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	14	51	-7	0	multi-exon	FALSE	canonical	3	61	junction_1	38.7774096607806	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	NA	False	NA	4	True	AATAAA	-13	NA	138115191	138132476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138124909_138131300
Isoform_147650_104	chr5	+	2160	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	-7	51	-7	0	multi-exon	FALSE	canonical	3	48	junction_1	50.6776303927307	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	NA	False	NA	4	True	AATAAA	-13	NA	138115191	138132476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300
Isoform_147655_3916	chr5	+	1092	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	30	665	1	3	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	3916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTTCCAGTGGCTTT	NA	False	NA	14	True	AATAAA	-15	NA	138159362	138162243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
Isoform_147667_48	chr5	+	1099	10	FSM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	1	-2	1	2	multi-exon	FALSE	canonical	3	173	junction_1	1439.16262518466	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159362	138162242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138159453_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
Isoform_147676_29	chr5	+	3460	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	14	5	11	-5	multi-exon	TRUE	canonical	3	48	junction_6	9.89356624586021	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTATGGTGGTGCATTC	8091	False	NA	13	True	NA	NA	NA	138170277	138178686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
Isoform_147677_77	chr5	+	3358	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	116	5	50	-5	multi-exon	FALSE	canonical	3	48	junction_6	9.89356624586021	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTATGGTGGTGCATTC	8193	False	NA	13	True	NA	NA	NA	138170379	138178686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
Isoform_147687_34	chr5	+	1619	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	-39	275	-39	-275	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTGAGTCCCATTTCAA	5559	False	NA	16	True	ATTAAA	-16	NA	138185707	138191905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
Isoform_147688_42	chr5	+	1548	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	33	274	33	-274	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGAGTCCCATTTCAAA	5631	False	NA	17	True	ATTAAA	-17	NA	138185779	138191906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
Isoform_147690_13	chr5	+	1818	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	34	3	34	-3	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTTAAGTGTAATACATA	5632	False	NA	NA	False	AAAACA	-9	NA	138185780	138192177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
Isoform_147691_219	chr5	+	576	4	FSM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	301	0	-48	0	multi-exon	FALSE	canonical	3	258	junction_1	67.9084350839832	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTGTGCACAGAATGGT	NA	False	NA	35	True	AATAAA	-27	NA	138254044	138257657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138254066_138254514_138254596_138256916_138257035_138257301
Isoform_147693_8	chr5	+	962	3	FSM	ENSMUSG00000050552.9	ENSMUST00000160157.2	980	3	16	2	16	1	multi-exon	FALSE	canonical	3	386	junction_1	14	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGCACAGAATGGTT	NA	False	NA	36	True	AATAAA	-28	NA	138254108	138257658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138254596_138256916_138257035_138257301
Isoform_147695_6	chr5	+	930	2	FSM	ENSMUSG00000085227.2	ENSMUST00000141454.2	624	2	19	-325	4	-4	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAGGACACAAGTTTA	6205	False	NA	NA	False	NA	NA	NA	138262334	138264919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138262364_138264018
Isoform_147697_4	chr5	+	708	3	FSM	ENSMUSG00000085227.2	ENSMUST00000124298.2	743	3	29	6	3	-6	multi-exon	FALSE	canonical	1	2	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCATGAGGACACAAGTT	6204	False	NA	NA	False	NA	NA	NA	138262333	138264917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138262364_138264018_138264268_138264488
Isoform_147698_5	chr5	+	4325	34	FSM	ENSMUSG00000036928.15	ENSMUST00000162245.8	4123	34	-207	5	97	-2	multi-exon	FALSE	canonical	1	2	junction_1	28.1737362148663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278598	138310650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_147699_10	chr5	+	4142	34	FSM	ENSMUSG00000036928.15	ENSMUST00000162245.8	4123	34	-21	2	-3	1	multi-exon	FALSE	canonical	1	2	junction_1	28.1737362148663	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278784	138310653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_147700_59	chr5	+	4157	34	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	29	junction_1	25.0320272353535	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278807	138310655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_147702_5	chr5	+	4135	34	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	28.2979360803849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278787	138310653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_138278883_138280166_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_147703_109	chr5	+	4191	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	20	0	2	0	multi-exon	FALSE	canonical	2	72	junction_1	21.1857845161499	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278807	138310655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_147704_6	chr5	+	4410	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	-202	3	84	0	multi-exon	TRUE	canonical	2	72	junction_1	21.1857845161499	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278585	138310652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_147705_23	chr5	+	4230	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	-22	3	-5	0	multi-exon	FALSE	canonical	2	72	junction_1	21.1857845161499	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278765	138310652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_147706_5	chr5	+	4296	34	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_32	27.3572763507199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278796	138310652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307631_138309995_138310068_138310297
Isoform_147707_5	chr5	+	4109	33	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_30	29.5591964327517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278785	138310653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307460_138307534_138309995_138310068_138310297
Isoform_147708_3	chr5	+	5046	32	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	1	intron_retention	FALSE	canonical	2	72	junction_1	21.1156076534985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278807	138310653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_147709_4	chr5	+	4776	30	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	1	intron_retention	FALSE	canonical	2	26	junction_16	27.2873902138863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278805	138310653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_147710_93	chr5	+	3257	5	FSM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	23	2032	12	-2032	multi-exon	FALSE	canonical	3	42	junction_4	9.52299847737046	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGAATGACGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	138439752	138456924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454136
Isoform_147714_17	chr5	+	3275	5	FSM	ENSMUSG00000036898.17	ENSMUST00000100524.3	869	5	-71	-2335	1	-2032	multi-exon	FALSE	canonical	3	9	junction_4	23.7276210354093	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGAATGACGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	138439730	138456924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454140
Isoform_147715_10	chr5	+	3052	4	FSM	ENSMUSG00000056014.16	ENSMUST00000069862.11	3038	4	-14	0	4	0	multi-exon	FALSE	canonical	3	19	junction_3	4.92160768674447	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGGACACTCTCCTT	1828	False	NA	49	True	AATAAA	-16	NA	138621141	138647098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138621251_138634425_138634553_138637756_138637850_138644375
Isoform_147716_6	chr5	+	3037	10	FSM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	531	14	-38	-14	multi-exon	TRUE	canonical	2	6	junction_4	3.46410161513775	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGCTCTCTGAGGTG	NA	False	NA	3	True	AATAAA	-16	NA	138740799	138795818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
Isoform_147719_726	chr5	+	3430	13	FSM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	18	2	12	-2	multi-exon	FALSE	canonical	3	278	junction_3	24.0323855569012	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGGCCATCTGTGTG	NA	False	NA	9	True	ATTAAA	-17	NA	139135995	139172263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
Isoform_147722_23	chr5	+	3527	13	FSM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	-80	3	-80	-3	multi-exon	FALSE	canonical	3	278	junction_3	24.0323855569012	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGGCCATCTGTGT	NA	False	NA	8	True	ATTAAA	-16	NA	139135897	139172262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
Isoform_14773_475	chr11	-	3030	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	1	846	1	-846	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGGTATTTGTTTGTTT	NA	False	NA	-8	True	AATAAA	-19	NA	79853215	79825624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
Isoform_14774_273	chr11	-	3866	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	1	10	1	-10	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAACTCATTGAGAA	NA	False	NA	-24	True	NA	NA	NA	79853215	79824788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
Isoform_147741_129	chr5	+	4100	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	33	1	1	-1	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186424	139235594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147742_329	chr5	+	4058	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	31	45	1	0	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186422	139235550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147743_39	chr5	+	4132	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	1	1	1	-1	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186392	139235594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147749_193	chr5	+	4096	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	247	junction_16	206.64914170786	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186424	139235593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147751_46	chr5	+	4127	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	247	junction_16	206.64914170786	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186392	139235592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147752_200	chr5	+	3947	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	8	0	1	0	multi-exon	FALSE	canonical	3	224	junction_8	208.642464528521	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186422	139235550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147753_42	chr5	+	3976	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	-21	0	2	0	multi-exon	FALSE	canonical	3	224	junction_8	208.642464528521	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186393	139235550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147756_58	chr5	+	3987	22	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_8	233.254943100303	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186423	139235594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147757_38	chr5	+	3890	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	9	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	227.455841868262	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCAAGTGATTAATAAAAG	NA	False	NA	-3	True	AATAAA	-30	NA	139186422	139235559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147758_25	chr5	+	3871	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	251.787926636684	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186422	139235543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147759_141	chr5	+	3910	22	FSM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	-12	-1290	1	-1	multi-exon	FALSE	canonical	3	224	junction_6	196.102233969428	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186422	139235594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147761_32	chr5	+	3937	22	FSM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	-40	-1289	3	-2	multi-exon	FALSE	canonical	3	224	junction_6	196.102233969428	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186394	139235593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147764_79	chr5	+	3907	22	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	222.683764466375	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186422	139235594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147766_57	chr5	+	3797	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	225.20792614826	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186424	139235594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147770_57	chr5	+	3793	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	249.524768309681	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186424	139235593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147773_179	chr5	+	3722	20	FSM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	27	-35	1	-10	multi-exon	FALSE	canonical	3	84	junction_6	213.143404315789	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTCTTGGCTTGTCT	NA	False	NA	23	True	AATAAA	-9	NA	139186424	139235585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147775_64	chr5	+	3728	20	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	84	junction_6	241.404420387916	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186423	139235593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147777_70	chr5	+	3631	19	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	224.162701328001	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186424	139235593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147778_43	chr5	+	3616	19	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	-17	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	252.672438368555	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTATTTCTTTTCTTGG	NA	False	NA	16	True	AATAAA	-2	NA	139186421	139235578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_147817_1892	chr5	+	1330	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	53	724	7	-2	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	1892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTTGTCTCTGCTTCCT	NA	False	NA	NA	False	AATAAA	-29	NA	139238131	139255082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_147818_506	chr5	+	2052	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	53	2	7	-2	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGCAGTAGTCCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	139238131	139255804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_147819_71	chr5	+	2108	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	-3	2	-3	-2	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGCAGTAGTCCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	139238075	139255804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_147821_258	chr5	+	1387	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	-4	724	-4	-2	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTTGTCTCTGCTTCCT	NA	False	NA	NA	False	AATAAA	-29	NA	139238074	139255082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_147825_77	chr5	+	2088	8	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	55	0	intron_retention	FALSE	canonical	3	1098	junction_7	56.9679465908287	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139238179	139255806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139253058_139253157_139253231_139254735
Isoform_147826_52	chr5	+	1414	8	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	1098	junction_7	56.9679465908287	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139238131	139255084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139253058_139253157_139253231_139254735
Isoform_147831_125	chr5	+	1329	9	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_2	357.02973878236	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139238131	139255084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_139238375_139248235_139248315_139248627_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_147839_12	chr5	+	1484	2	FSM	ENSMUSG00000044197.9	ENSMUST00000051293.8	4157	2	77	2596	77	1056	multi-exon	FALSE	canonical	3	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATATTGACATGATACT	1432	False	NA	NA	False	AATGAA	-29	NA	139366412	139379574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139366499_139378176
Isoform_147842_32	chr5	+	2824	3	FSM	ENSMUSG00000018143.11	ENSMUST00000018287.10	2849	3	20	5	-1	-5	multi-exon	FALSE	canonical	3	22	junction_1	1.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTCTGGTGTCTGGAT	NA	False	NA	11	True	AATAAA	-16	NA	139777287	139788403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_139777468_139784893_139784974_139785839
Isoform_147843_73	chr5	+	926	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	27	1	-18	-1	multi-exon	FALSE	canonical	3	93	junction_1	49.2461927462418	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTGTGTGACTACAGC	NA	False	NA	9	True	NA	NA	NA	140317690	140323891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
Isoform_147845_26	chr5	+	890	4	FSM	ENSMUSG00000036639.13	ENSMUST00000071881.10	952	4	61	1	12	-1	multi-exon	FALSE	canonical	3	19	junction_1	90.7450641449256	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTGTGTGACTACAGC	NA	False	NA	9	True	NA	NA	NA	140317675	140323891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140317711_140320209_140320375_140321067_140321214_140323347
Isoform_14785_803	chr11	-	2315	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	51	30	-2	-30	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAATAAAAAATGAAAA	4539	False	NA	-33	True	NA	NA	NA	79971766	79937348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
Isoform_147852_7303	chr5	+	2967	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	-22	0	-22	0	multi-exon	FALSE	canonical	3	2428	junction_3	310.145868707844	7303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405060	140429115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
Isoform_147854_135	chr5	+	2997	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	-52	0	-52	0	multi-exon	TRUE	canonical	3	2428	junction_3	310.145868707844	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405030	140429115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
Isoform_14786_185	chr11	-	2358	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	8	30	8	-30	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAATAAAAAATGAAAA	4496	False	NA	-33	True	NA	NA	NA	79971809	79937348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
Isoform_147889_3	chr5	-	542	2	Antisense	novelGene_ENSMUSG00000056076.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTCAATGGTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	140429117	140428138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_140428191_140428627
Isoform_147890_99	chr5	+	1788	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	56	487	31	-487	multi-exon	FALSE	canonical	3	68	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCATTCCTGTGGTT	NA	False	NA	18	True	AGTAAA	-14	NA	140491360	140510992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140491452_140509295
Isoform_147892_13	chr5	+	1783	2	FSM	ENSMUSG00000036599.11	ENSMUST00000124142.2	766	2	68	-1085	68	-486	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCATTCCTGTGGTTC	NA	False	NA	19	True	AGTAAA	-15	NA	140491397	140510993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140491483_140509295
Isoform_147893_15	chr5	+	2283	8	FSM	ENSMUSG00000029570.6	ENSMUST00000031555.3	2305	8	21	1	21	-1	multi-exon	FALSE	canonical	2	6	junction_3	5.13888735674427	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAGGGGCCCTAGTCTT	NA	False	NA	6	True	AATAAA	-17	NA	140593095	140601299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140593600_140597604_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
Isoform_147895_252	chr5	+	3319	14	FSM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	12	2	0	-2	multi-exon	FALSE	canonical	3	71	junction_1	10.6471097836719	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTGTCTTCTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	140690777	140705132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_147899_33	chr5	+	3339	14	NIC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	24.0315374643282	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTTCTGTCTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	140690779	140705130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_14790_72	chr11	-	2347	8	NIC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	15	-30	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	246.701505169833	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAATAAAAAATGAAAA	4503	False	NA	-33	True	NA	NA	NA	79971802	79937348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971613
Isoform_147902_9	chr5	+	3456	15	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.5197170121024	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690786	140705131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_140690831_140691707_140691852_140695618_140695766_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_147904_50	chr5	+	3443	14	FSM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	-14	2	0	-2	multi-exon	FALSE	canonical	2	10	junction_1	24.1966793164027	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTGTCTTCTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	140690806	140705132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_147907_7	chr5	+	3467	14	NIC	ENSMUSG00000000148.18	novel	3431	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	31.3678311077187	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTGTCTTCTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	140690806	140705132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_147909_13	chr5	+	2621	7	FSM	ENSMUSG00000050022.17	ENSMUST00000120630.3	4037	7	36	1380	-5	1	multi-exon	FALSE	canonical	0	0	junction_3	4.16333199893227	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTCATGTATTGTT	NA	False	NA	24	True	NA	NA	NA	140721316	140739066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_140721394_140726819_140727343_140729771_140729940_140733897_140734027_140734369_140734543_140734909_140735087_140737692
Isoform_147910_17	chr5	+	1408	2	ISM	ENSMUSG00000050022.17	ENSMUST00000176035.2	2402	4	11	8132	11	-3	5prime_fragment	FALSE	canonical	3	12	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGTGTCATGTAT	NA	False	NA	20	True	NA	NA	NA	140735048	140739062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_140735087_140737692
Isoform_147911_3	chr5	+	2804	2	ISM	ENSMUSG00000050022.17	ENSMUST00000176035.2	2402	4	-3	6750	-3	-2	5prime_fragment	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTGGCTTCATCAACT	NA	False	NA	NA	False	NA	NA	NA	140735034	140740444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_140735087_140737692
Isoform_147912_6	chr5	+	2055	2	ISM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	0	25358	0	17033	5prime_fragment	FALSE	canonical	3	31	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	142387254	142422408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_142387797_142420895
Isoform_147913_32	chr5	+	2389	9	FSM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	1	5049	1	-5049	multi-exon	FALSE	canonical	3	17	junction_3	5.8309518948453	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTGGGGGTTCTGTGT	NA	False	NA	NA	False	CATAAA	-24	NA	142387255	142442717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
Isoform_147914_24	chr5	+	7431	9	FSM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	12	-4	12	4	multi-exon	FALSE	canonical	3	17	junction_3	5.8309518948453	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGGTATGAGTGGTCC	NA	False	NA	16	True	AATAAA	-23	NA	142387266	142447770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
Isoform_147915_6	chr5	+	3812	16	ISM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-16	-3	-6	3	intron_retention	FALSE	canonical	3	53	junction_8	14.7939927748469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCGCGGTGTCTTCTG	8684	False	NA	7	True	AATAAA	-17	NA	142449792	142464468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651
Isoform_147916_11	chr5	+	2936	16	ISM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-48	905	7	3	intron_retention	FALSE	canonical	3	53	junction_8	14.7939927748469	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8652	False	NA	17	True	AATAAA	-22	NA	142449760	142463560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651
Isoform_147917_196	chr5	+	2783	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	1	905	1	3	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8701	False	NA	17	True	AATAAA	-22	NA	142449809	142463560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_147918_24	chr5	+	3694	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	1	-6	1	6	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGCGGTGTCTTCTGGGT	8701	False	NA	10	True	AATAAA	-20	NA	142449809	142464471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_147919_3	chr5	+	2883	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-96	902	14	6	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCACATGCCTTTCA	8604	False	NA	20	True	AATAAA	-25	NA	142449712	142463563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_147920_6	chr5	+	3146	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-2	3	intron_retention	FALSE	canonical	3	53	junction_8	14.5134420452214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8698	False	NA	17	True	AATAAA	-22	NA	142449806	142463560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_147921_9	chr5	+	2730	17	FSM	ENSMUSG00000039623.14	ENSMUST00000196055.2	2965	17	-14	249	-1	3	multi-exon	FALSE	canonical	0	0	junction_11	25.1941678519057	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8706	False	NA	17	True	AATAAA	-22	NA	142449814	142463560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460176_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_147922_3	chr5	+	3647	17	NNC	ENSMUSG00000039623.14	novel	2965	17	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	31.5869336118592	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGGCGCGGTGTCTTCT	8695	False	NA	6	True	AATAAA	-16	NA	142449803	142464467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453397_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460176_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_147923_15	chr5	+	3127	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-10	3	intron_retention	FALSE	canonical	3	53	junction_8	15.4324333790883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8680	False	NA	17	True	AATAAA	-22	NA	142449788	142463560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_147924_5	chr5	+	3475	15	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	2	3	intron_retention	FALSE	canonical	3	53	junction_8	15.0056111953808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8692	False	NA	17	True	AATAAA	-22	NA	142449800	142463560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_147925_10	chr5	+	2867	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	63	junction_7	13.0632648633061	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8680	False	NA	14	True	AATAAA	-19	NA	142449788	142463557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_147931_587	chr5	+	2106	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	13	3052	13	49	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGGGACTAGCTTCC	NA	False	NA	17	True	ATTAAA	-17	NA	142615309	142653291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
Isoform_147932_47	chr5	+	2131	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	-12	3052	-12	49	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGGGACTAGCTTCC	NA	False	NA	17	True	ATTAAA	-17	NA	142615284	142653291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
Isoform_147933_499	chr5	+	4217	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	36	918	-13	-918	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCCCAGAGTCAAGTGC	NA	False	NA	12	True	AATAAA	-13	NA	142615332	142655425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
Isoform_147934_42	chr5	+	4260	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	-7	918	-7	-918	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCCCAGAGTCAAGTGC	NA	False	NA	12	True	AATAAA	-13	NA	142615289	142655425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
Isoform_147954_126	chr5	+	2780	11	FSM	ENSMUSG00000050822.12	ENSMUST00000058418.8	2789	11	8	1	8	-1	multi-exon	TRUE	canonical	3	36	junction_7	3.13847096529504	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGCTGTCCTGAGGAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	142687863	142708244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142688047_142691110_142691291_142697717_142697850_142698641_142698756_142699765_142699895_142700800_142700876_142703346_142703592_142704211_142704354_142704465_142704654_142705711_142705953_142707093
Isoform_147957_12672	chr5	+	2660	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	13	2	13	0	multi-exon	FALSE	canonical	3	2634	junction_2	132.012310032057	12672	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946110	142958938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
Isoform_14796_363	chr11	-	1276	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	32	1	0	-1	multi-exon	FALSE	canonical	3	265	junction_2	2.16024689946929	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCCTTCTTTGCTTA	NA	False	NA	-5	True	AATAAA	-13	NA	80032969	80027504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
Isoform_147984_111	chr5	+	4358	5	FSM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	24	883	24	3	multi-exon	FALSE	canonical	3	36	junction_1	7.11951543294907	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTGTGTATGCTTCCT	NA	False	NA	14	True	AATGAA	-6	NA	143220952	143233706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074_143226171_143229816
Isoform_147989_17	chr5	+	4426	5	FSM	ENSMUSG00000029587.17	ENSMUST00000075916.8	4384	5	-48	6	25	2	multi-exon	FALSE	canonical	2	8	junction_3	16.7835484924971	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTGTGTATGCTTCC	NA	False	NA	13	True	AATGAA	-5	NA	143220953	143233705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143221135_143222008_143222072_143225708_143225906_143226074_143226171_143229816
Isoform_14799_37	chr11	-	1533	4	NIC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	108.206592528675	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCCTTCTTTGCTTA	NA	False	NA	-5	True	AATAAA	-13	NA	80032979	80027504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_80028106_80028743_80028894_80030691_80031397_80032902
Isoform_147990_6	chr5	+	4481	5	FSM	ENSMUSG00000029587.17	ENSMUST00000075916.8	4384	5	-103	6	-19	2	multi-exon	FALSE	canonical	2	8	junction_3	16.7835484924971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTGTGTATGCTTCC	NA	False	NA	13	True	AATGAA	-5	NA	143220898	143233705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143221135_143222008_143222072_143225708_143225906_143226074_143226171_143229816
Isoform_147992_828	chr5	+	1840	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-10	-1	-10	1	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGGTCTTTTCTATG	NA	False	NA	NA	False	AATAAA	-16	NA	143389582	143407657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
Isoform_147994_16	chr5	+	1880	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-55	4	-55	-4	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAATGTATGGTCTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	143389537	143407652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
Isoform_148003_39	chr5	+	2897	15	FSM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	5	1749	5	-1749	multi-exon	FALSE	canonical	3	16	junction_4	5.5272977491866	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGCAAGGAAGGTG	NA	False	NA	NA	False	AATAAA	-26	NA	143450343	143489948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143450532_143452707_143452860_143458701_143458874_143460367_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
Isoform_148005_57	chr5	+	925	2	FSM	ENSMUSG00000118332.2	ENSMUST00000118121.2	919	2	-7	1	-7	-1	multi-exon	TRUE	canonical	3	93	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCGGTGTTTTCCTAAT	NA	False	NA	8	True	AATAAA	-13	NA	143534493	143537692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143534890_143537163
Isoform_148007_355	chr5	+	2182	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	16	0	14	0	multi-exon	FALSE	canonical	3	103	junction_1	0	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGTATGTTCTCCTT	NA	False	NA	26	True	AATAAA	-39	NA	143534476	143550280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143534890_143548511
Isoform_148011_101	chr5	+	3684	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	45	9	-9	-9	multi-exon	FALSE	canonical	3	61	junction_12	7.06468132488807	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAAAACTGCCTAAGAC	NA	False	NA	-4	True	AATAAA	-13	NA	143608246	143695996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
Isoform_148013_4	chr5	+	3537	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	-2	203	-2	-203	multi-exon	FALSE	canonical	3	61	junction_12	7.06468132488807	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATATGTATTAATTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	143608199	143695802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
Isoform_148018_386	chr5	+	2764	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	26	1535	-17	-1535	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTGGACAAGTCCCT	NA	False	NA	19	True	AATAAA	-24	NA	143803568	143839534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
Isoform_148021_20	chr5	+	3348	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	30	947	-13	-947	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGAGCCTTTAGGTTTT	NA	False	NA	NA	False	AAAACA	-20	NA	143803572	143840122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
Isoform_148023_6	chr5	+	2547	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	10	-1534	combination_of_known_splicesites	FALSE	canonical	3	4	junction_13	58.0289664456085	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGGACAAGTCCCTT	NA	False	NA	20	True	AATAAA	-25	NA	143803552	143839535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143838602
Isoform_148025_4	chr5	+	928	4	FSM	ENSMUSG00000079109.12	ENSMUST00000154781.8	955	4	-24	51	2	-51	multi-exon	FALSE	canonical	3	79	junction_1	13.490737563232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGATGCTTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	143846818	143851058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436
Isoform_148026_4	chr5	+	3322	11	FSM	ENSMUSG00000079109.12	ENSMUST00000126331.2	2826	11	-6	-490	-6	490	multi-exon	FALSE	canonical	3	72	junction_4	12.2723265927859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGATTTATGT	NA	False	NA	NA	False	AATAAA	-21	NA	143846836	143864178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038
Isoform_148027_129	chr5	+	2918	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	38	2526	-2	0	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCATGTCTGCAGTTAC	NA	False	NA	NA	False	AAAAAG	-17	NA	143846819	143868260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
Isoform_148030_38	chr5	+	2896	15	FSM	ENSMUSG00000079109.12	ENSMUST00000170083.8	5477	15	57	2524	-4	2	multi-exon	FALSE	canonical	2	18	junction_1	27.3439916170083	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGTCTGCAGTTACTG	NA	False	NA	NA	False	AAAAAG	-19	NA	143846838	143868262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
Isoform_148031_3	chr5	+	3261	15	FSM	ENSMUSG00000079109.12	ENSMUST00000170083.8	5477	15	14	2202	-12	324	multi-exon	FALSE	canonical	2	18	junction_1	27.3439916170083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCCCGACTCATGAAAT	NA	False	NA	13	True	ATTAAA	-30	NA	143846795	143868584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
Isoform_148032_11	chr5	+	2761	14	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	28.7468032696655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTCTGCAGTTACTGT	NA	False	NA	NA	False	AAAAAG	-20	NA	143846839	143868263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_143846898_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
Isoform_148033_6	chr5	+	3065	15	NNC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	0	317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	36.4390041083475	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTCTCAATCCCGACTC	NA	False	NA	6	True	ATTAAA	-23	NA	143846821	143868577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_143846898_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833_143868300_143868327
Isoform_148034_4	chr5	+	2113	4	NNC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	-72	-52464	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	30.7354301526214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	144037181	144072558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_144037595_144066170_144066296_144070953_144071504_144071533
Isoform_148036_47	chr5	+	8173	14	FSM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	-64	5	-64	-5	multi-exon	FALSE	canonical	3	41	junction_10	10.2628185108664	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTGTTGCTACAT	NA	False	NA	NA	False	AATAAA	-18	NA	144037189	144125017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
Isoform_148039_13	chr5	+	8179	14	NNC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	-64	4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	16.0413666433687	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTACATTTACTCCTT	NA	False	NA	NA	False	AATAAA	-27	NA	144037189	144125026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_144037595_144066170_144066296_144070953_144071099_144080346_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
Isoform_148045_14	chr5	+	3494	2	FSM	ENSMUSG00000052271.8	ENSMUST00000060747.8	3494	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTGGTATAAATTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	144127103	144131259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_144127177_144127838
Isoform_148046_474	chr5	+	749	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	27	179	27	0	multi-exon	FALSE	canonical	3	246	junction_1	16.5	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTAGCTTGTTCTGCTC	1656	False	NA	0	True	AATAAA	-15	NA	144192070	144201205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_144192330_144192619_144192723_144200818
Isoform_148053_587	chr5	+	2551	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-17	2	-17	-2	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGCTTCTTGTTCTC	NA	False	NA	9	True	ATTAAA	-15	NA	144482694	144494286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
Isoform_148054_15	chr5	+	2581	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-45	0	-45	0	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTTCTTGTTCTCTC	NA	False	NA	11	True	ATTAAA	-17	NA	144482666	144494288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
Isoform_148060_19	chr5	+	525	5	ISM	ENSMUSG00000045482.17	ENSMUST00000136379.2	2621	12	56	9922	56	857	5prime_fragment	FALSE	canonical	3	42	junction_1	9.03811374126261	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTTTGACAATTCTCT	NA	False	NA	NA	False	NA	NA	NA	144704957	144714795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690
Isoform_148061_3	chr5	+	12526	71	NIC	ENSMUSG00000045482.17	novel	12344	70	NA	NA	56	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_21	30.7730865715946	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	144704957	144796588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728080_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
Isoform_148062_3	chr5	+	4787	22	ISM	ENSMUSG00000045482.17	ENSMUST00000132925.2	11581	63	43083	0	8810	0	3prime_fragment	FALSE	canonical	3	81	junction_2	20.4531431755522	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGTGCCCTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	144765417	144796586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
Isoform_148063_4	chr5	+	4667	21	ISM	ENSMUSG00000045482.17	ENSMUST00000132925.2	11581	63	45464	-2	-7996	0	3prime_fragment	FALSE	canonical	3	81	junction_1	20.2474689776278	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	144767798	144796588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
Isoform_148065_4	chr5	+	4327	19	ISM	ENSMUSG00000045482.17	ENSMUST00000132925.2	11581	63	47531	4	-5929	-4	3prime_fragment	FALSE	canonical	3	94	junction_2	18.395517435734	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGCTGTGCCCTA	1304	False	NA	NA	False	AATAAA	-10	NA	144769865	144796582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
Isoform_148067_7	chr5	+	3938	16	ISM	ENSMUSG00000045482.17	ENSMUST00000132925.2	11581	63	50463	4	-2997	-4	3prime_fragment	FALSE	canonical	3	96	junction_2	18.3193886360872	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGCTGTGCCCTA	1464	False	NA	NA	False	AATAAA	-10	NA	144772797	144796582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
Isoform_148081_459	chr5	+	1608	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	19	5	19	0	multi-exon	TRUE	canonical	3	332	junction_5	31.8084545015595	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTTTCTTTAT	NA	False	NA	17	True	ATTAAA	-18	NA	145020658	145045566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
Isoform_148089_3406	chr5	+	1389	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	74	1642	-12	-16	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	3406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	8106	False	NA	NA	False	AAGAAA	-30	NA	145051098	145064867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
Isoform_148090_2269	chr5	+	1551	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	41	1513	-2	98	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCACTCG	8073	False	NA	29	True	AATAAA	-15	NA	145051065	145064996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
Isoform_14810_70	chr11	-	4533	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	16	5	-3	-5	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAGGCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	80268844	80251323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
Isoform_148115_20	chr5	+	745	6	FSM	ENSMUSG00000038722.18	ENSMUST00000159018.8	741	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	42	junction_2	311.754133894003	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077213	145084884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145077253_145078114_145078171_145079257_145079378_145081708_145081832_145083252_145083420_145084644
Isoform_148116_609	chr5	+	819	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	44	4	-2	0	multi-exon	FALSE	canonical	3	705	junction_1	67.372397908936	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077215	145084884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
Isoform_148117_131	chr5	+	849	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	14	4	14	0	multi-exon	FALSE	canonical	3	705	junction_1	67.372397908936	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077185	145084884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
Isoform_14812_3	chr11	-	5370	22	FSM	ENSMUSG00000035441.15	ENSMUST00000041065.14	5354	22	-16	0	-16	0	multi-exon	FALSE	canonical	1	2	junction_3	2.91683672973592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAAGGTGTTCTGTTTC	NA	False	NA	1	True	AATAAA	-14	NA	80670867	80372951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_80375209_80448259_80448415_80477672_80477787_80483612_80483718_80484564_80484710_80492408_80492633_80528699_80528908_80531044_80531212_80548218_80548352_80553866_80553942_80557400_80557472_80561674_80561846_80565439_80565555_80565642_80565789_80566876_80567081_80567647_80567765_80570845_80570942_80573207_80573262_80575150_80575317_80576675_80576770_80583706_80583916_80670523
Isoform_148120_119	chr5	+	908	6	FSM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	20	0	20	0	multi-exon	FALSE	canonical	3	107	junction_1	298.93035978301	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTACATTCTTTCTTTT	NA	False	NA	13	True	AATAAA	-14	NA	145077244	145084881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145077374_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
Isoform_148124_54	chr5	+	1765	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	-8	-1	-8	0	multi-exon	FALSE	canonical	3	31	junction_6	266.097419631784	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104048	145118851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115567_145115739_145117945
Isoform_148127_566	chr5	+	1693	8	FSM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	-18	-288	-11	0	multi-exon	FALSE	canonical	3	381	junction_6	148.975001327096	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104045	145118851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
Isoform_14813_5	chr11	-	3031	19	ISM	ENSMUSG00000035441.15	ENSMUST00000070997.6	3106	21	-2	8759	-2	-8759	5prime_fragment	FALSE	canonical	1	2	junction_13	2.72448885227538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTTTTTTCATTTA	NA	False	NA	NA	False	AATAAA	-31	NA	80670853	80483411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_80483718_80484564_80484710_80492408_80492633_80528699_80528908_80531044_80531212_80548218_80548352_80553866_80553942_80557400_80557472_80561674_80561846_80565439_80565555_80565642_80565789_80566876_80567081_80567647_80567765_80570845_80570942_80573207_80573262_80575150_80575317_80576675_80576770_80583706_80583916_80670523
Isoform_148132_465	chr5	+	1689	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	23	1	-11	0	multi-exon	FALSE	canonical	3	267	junction_6	186.36939400129	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104045	145118850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
Isoform_148142_4	chr5	+	3766	6	NIC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	-24	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	25.9460979725276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCTGACTTGAGGT	913	False	NA	3	True	ATTAAA	-8	NA	145141347	145158553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149406_145155096_145155694_145156862
Isoform_148143_113	chr5	+	3811	6	FSM	ENSMUSG00000055991.16	ENSMUST00000085671.10	3794	6	-23	6	-23	-6	multi-exon	FALSE	canonical	3	45	junction_2	9.08625335328044	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCTGACTTGAGGTT	914	False	NA	4	True	ATTAAA	-9	NA	145141348	145158554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
Isoform_148145_4	chr5	+	3675	5	NIC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	-23	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	27.2075357208256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCTGACTTGAGGTT	914	False	NA	4	True	ATTAAA	-9	NA	145141348	145158554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_145142519_145144385_145144519_145148555_145148639_145155096_145155694_145156862
Isoform_148148_42	chr5	+	1263	5	FSM	ENSMUSG00000007812.17	ENSMUST00000200039.5	1765	5	27	475	-13	-1	multi-exon	FALSE	canonical	3	46	junction_3	167.334059593377	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGTACTTTTTGTA	1318	False	NA	NA	False	AATACA	-15	NA	145168551	145174657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859
Isoform_14815_3	chr11	-	903	2	FSM	ENSMUSG00000085175.8	ENSMUST00000136051.2	655	2	-22	-226	-22	-4	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAGTTCATTATGTC	NA	False	NA	0	True	AATAAA	-18	NA	82671890	82670430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_82671125_82671681
Isoform_148150_44	chr5	+	4175	5	FSM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	-13	-5	-13	4	multi-exon	FALSE	canonical	3	27	junction_3	175.330402383614	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTTGTTTTGAGCCAA	1318	False	NA	20	True	NA	NA	NA	145168551	145184116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145179729_145179835_145180384
Isoform_148153_360	chr5	+	4086	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	21	-3	-11	3	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTTGTTTTGAGCCA	1320	False	NA	19	True	NA	NA	NA	145168553	145184115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
Isoform_148154_206	chr5	+	4113	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	-6	-3	2	3	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTTGTTTTGAGCCA	1293	False	NA	19	True	NA	NA	NA	145168526	145184115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
Isoform_14816_5	chr11	-	3657	8	NIC	ENSMUSG00000020696.19	novel	3575	8	NA	NA	32	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	65.6906789896592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2775	False	NA	NA	False	AATAAA	-12	NA	82762004	82694646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82724906_82725106_82761833
Isoform_148166_19	chr5	+	2835	7	NNC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	2	961	at_least_one_novel_splicesite	FALSE	non_canonical	1	13	junction_6	17.2143351115671	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGTAACTTTCCTGTAAA	2775	False	NA	8	True	AATAAA	-21	NA	145217311	145229049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_145217438_145220188_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139_145228286_145228306
Isoform_148167_3	chr5	+	2516	6	NIC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	-15	604	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	14.7431339951857	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCTTGGGAATGGAAC	2758	False	NA	NA	False	NA	NA	NA	145217294	145228692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_145217438_145220188_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139
Isoform_148168_3	chr5	+	2604	6	NNC	ENSMUSG00000070420.5	novel	1799	5	NA	NA	36	962	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_2	22.2315091705444	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAACTTTCCTGTAAAT	2809	False	NA	9	True	AATAAA	-22	NA	145217345	145229050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_145217438_145220188_145220595_145224117_145224210_145225103_145225228_145227139_145228286_145228306
Isoform_148169_132	chr5	+	2883	7	NNC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	-19	961	at_least_one_novel_splicesite	TRUE	non_canonical	1	13	junction_6	15.0074055793206	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGTAACTTTCCTGTAAA	2754	False	NA	8	True	AATAAA	-21	NA	145217290	145229049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_145217438_145220161_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139_145228286_145228306
Isoform_148172_7	chr5	+	2587	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	32.5016025245936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146167997	146239684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_148174_3	chr5	+	2433	12	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	37.5886830164225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168007	146239684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_148176_109	chr5	+	3061	13	FSM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	-90	2	-32	-2	multi-exon	FALSE	canonical	3	65	junction_3	19.7545704978761	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATGGTGTCAACTATA	NA	False	NA	NA	False	AATAAA	-18	NA	146168007	146239682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_148179_3	chr5	+	3010	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	31.927870096342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCAATGTATGGTGTCA	NA	False	NA	NA	False	AATAAA	-12	NA	146168037	146239676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229448_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_148180_3	chr5	+	3055	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-60	-6	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	32.380120787641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATGTATGGTGTCAAC	NA	False	NA	NA	False	AATAAA	-14	NA	146167979	146239678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229463_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_148181_23	chr5	+	2886	12	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	26.9241358433115	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATGTATGGTGTCAAC	NA	False	NA	NA	False	AATAAA	-14	NA	146168034	146239678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_148183_15	chr5	+	2937	12	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-73	20	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	26.9241358433115	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTATTTTTCATAAAT	NA	False	NA	NA	False	AATAAA	-39	NA	146167966	146239661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_148186_187	chr5	+	4911	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	284	1	284	-1	multi-exon	TRUE	canonical	3	97	junction_1	19.5037191768236	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTCTGCTTATTTAT	NA	False	NA	14	True	AATAAA	-18	NA	146322078	146410424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
Isoform_148188_9	chr5	+	4907	10	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	283	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	55.5139844465861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146322077	146410425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146402659_146402830_146403607_146403875_146405024_146405390_146407029
Isoform_14819_8	chr11	-	3654	8	FSM	ENSMUSG00000020696.19	ENSMUST00000071152.14	3633	8	-20	-1	-20	1	multi-exon	FALSE	canonical	3	25	junction_6	57.61306541161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2723	False	NA	NA	False	AATAAA	-12	NA	82762056	82694646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577_82736722_82761833
Isoform_148193_4	chr5	+	700	5	ISM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	258	1047	2	0	intron_retention	FALSE	canonical	3	6955	junction_1	2734.85689753596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	1	True	AATAAA	-15	NA	146769957	146772795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373
Isoform_148194_147	chr5	+	761	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	49	1046	49	0	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769748	146772796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_148196_20	chr5	+	792	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	18	1046	18	0	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769717	146772796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_148198_8	chr5	+	1600	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	255	1	-1	-1	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTTGTTAGTGATGGT	NA	False	NA	NA	False	ATTAAA	-18	NA	146769954	146773841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_148200_17	chr5	+	648	7	NNC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	5852.7472585293	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769954	146772796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_146769982_146770457_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_148201_32	chr5	+	907	6	FSM	ENSMUSG00000041453.13	ENSMUST00000075453.9	899	6	-7	-1	-7	0	multi-exon	FALSE	canonical	3	51	junction_1	5104.64844626934	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769997	146772796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146770377_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_148202_6	chr5	+	1021	7	NNC	ENSMUSG00000041453.13	novel	899	6	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5857.52873564346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	1	True	AATAAA	-15	NA	146769975	146772795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_146770377_146770457_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_148203_62	chr5	+	1095	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	-30	2	-23	-1	multi-exon	FALSE	canonical	3	123	junction_1	5077.72757835629	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGAAGTGTTTTCCTT	NA	False	NA	0	True	AATAAA	-14	NA	146769981	146772794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_14821_53	chr11	-	3479	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	13	-3	13	3	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2756	False	NA	NA	False	AATAAA	-14	NA	82762023	82694644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
Isoform_148210_14	chr5	+	1102	4	FSM	ENSMUSG00000029641.9	ENSMUST00000031646.8	1126	4	25	-1	25	1	multi-exon	FALSE	canonical	2	3	junction_1	0.816496580927726	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTTTTCTGAATGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	146781905	146784537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146782151_146782469_146782527_146782649_146782730_146783817
Isoform_148212_282	chr5	+	1455	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	-29	0	19	0	multi-exon	FALSE	canonical	3	430	junction_2	50.1141553997328	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCGACTCTTTGCTGTT	NA	False	NA	15	True	ATTAAA	-15	NA	146885485	146892416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
Isoform_148213_546	chr5	+	1275	9	FSM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	15	8	15	0	multi-exon	FALSE	canonical	3	398	junction_8	56.9906790624572	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCGACTCTTTGCTGTT	NA	False	NA	15	True	ATTAAA	-15	NA	146885481	146892416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
Isoform_148217_265	chr5	+	662	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	529	5	15	-5	multi-exon	FALSE	canonical	3	451	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTTTTGAGTGGTTTC	NA	False	NA	17	True	NA	NA	NA	147014388	147015891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_147014504_147015344
Isoform_148218_88	chr5	+	694	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	497	5	-1	-5	multi-exon	FALSE	canonical	3	451	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTTTTGAGTGGTTTC	NA	False	NA	17	True	NA	NA	NA	147014356	147015891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_147014504_147015344
Isoform_14822_78	chr11	-	3449	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	41	-1	41	1	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2784	False	NA	NA	False	AATAAA	-12	NA	82761995	82694646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
Isoform_148220_238	chr5	+	902	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	233	2	15	-2	multi-exon	FALSE	canonical	3	400	junction_1	26.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTTCCTCTTTTGGGT	NA	False	NA	14	True	AATAAA	-15	NA	147014388	147048169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_147014504_147038038_147038114_147047457
Isoform_148221_154	chr5	+	950	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	185	2	-17	-2	multi-exon	FALSE	canonical	3	400	junction_1	26.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTTCCTCTTTTGGGT	NA	False	NA	14	True	AATAAA	-15	NA	147014340	147048169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_147014504_147038038_147038114_147047457
Isoform_148223_6	chr5	+	1085	3	FSM	ENSMUSG00000106820.2	ENSMUST00000201128.2	1081	3	1	-5	1	5	multi-exon	FALSE	canonical	3	33	junction_2	30.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	147355411	147359859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_147355512_147357439_147357607_147359041
Isoform_148224_25	chr5	+	809	3	FSM	ENSMUSG00000106820.2	ENSMUST00000201128.2	1081	3	2	270	2	-270	multi-exon	FALSE	canonical	3	33	junction_2	30.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGATGATTTGAATATG	NA	False	NA	4	True	NA	NA	NA	147355412	147359584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_147355512_147357439_147357607_147359041
Isoform_148228_10	chr5	+	5138	20	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	39.0901366224708	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTTGTATTTCTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	147366986	147485300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
Isoform_148229_40	chr5	+	5649	18	ISM	ENSMUSG00000029647.16	ENSMUST00000031651.15	5048	19	16	12	16	2	intron_retention	FALSE	canonical	3	100	junction_5	15.3065560280373	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTTGTATTTCTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	147366986	147485300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
Isoform_148230_120	chr5	+	5026	19	FSM	ENSMUSG00000029647.16	ENSMUST00000031651.15	5048	19	16	6	16	0	multi-exon	FALSE	canonical	3	100	junction_5	15.1677858764904	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366986	147485306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
Isoform_148238_1320	chr5	+	739	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	165	675	-2	170	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	1320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGTGTGTGGTTGGGTT	NA	False	NA	33	True	AATAAA	-23	NA	147797435	147812591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
Isoform_148246_6	chr5	+	459	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	0	550	0	-10	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTGTACAGAGGCTC	NA	False	NA	5	True	ATTAAA	-13	NA	148239983	148250260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
Isoform_148248_11	chr5	+	3046	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	24	-2061	24	-4	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATCCATGTGGTCTGTGT	NA	False	NA	9	True	ATTAAA	-22	NA	148240007	148252871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
Isoform_148252_16	chr5	+	3183	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	5	-2603	-4	-2	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCATGTGGTCTGTGTTA	NA	False	NA	11	True	ATTAAA	-24	NA	148239979	148252873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
Isoform_148255_6	chr5	+	3276	3	ISM	ENSMUSG00000029651.17	ENSMUST00000110514.8	1532	8	37835	-2022	6	-5	3prime_fragment	FALSE	canonical	3	103	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATCCATGTGGTCTGTG	NA	False	NA	8	True	ATTAAA	-21	NA	148239989	148252870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_148240413_148243439_148243538_148250115
Isoform_148258_9	chr5	+	511	2	NNC	ENSMUSG00000086494.2	novel	550	2	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTGAATACATCTAC	NA	False	NA	NA	False	NA	NA	NA	148678645	148679942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_148678795_148679580
Isoform_14826_4	chr11	-	3600	8	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	-27	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	64.8930045599395	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2716	False	NA	NA	False	AATAAA	-14	NA	82762063	82694644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82755078_82755160_82761833
Isoform_148260_37	chr5	+	3826	10	FSM	ENSMUSG00000041264.17	ENSMUST00000122160.8	3827	10	5	-4	1	0	multi-exon	FALSE	canonical	3	36	junction_1	142.108287696738	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121477	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_148262_11	chr5	+	3326	11	NIC	ENSMUSG00000041264.17	novel	3827	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	144.908384850567	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121477	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
Isoform_148265_34	chr5	+	3607	9	FSM	ENSMUSG00000041264.17	ENSMUST00000119685.8	3604	9	1	-4	1	0	multi-exon	FALSE	canonical	3	22	junction_2	126.885713833355	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121477	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_148267_12	chr5	+	3107	10	NIC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	135.337438361387	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121477	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
Isoform_14827_5	chr11	-	3532	8	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	41	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	64.8930045599395	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2784	False	NA	NA	False	AATAAA	-14	NA	82761995	82694644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82755078_82755160_82761833
Isoform_148270_294	chr5	+	3649	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	108	0	1	0	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121477	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_148271_24	chr5	+	3726	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	31	0	31	0	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121400	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_148273_107	chr5	+	3149	10	FSM	ENSMUSG00000041264.17	ENSMUST00000100410.10	3148	10	2	-3	1	0	multi-exon	FALSE	canonical	3	110	junction_9	101.142119787266	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121477	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
Isoform_148280_257	chr5	+	3480	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	318	-6	1	0	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121477	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_148284_16	chr5	+	3557	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	241	-6	31	0	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121400	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_148285_84	chr5	+	2980	9	FSM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	-48	-1	1	0	multi-exon	FALSE	canonical	3	110	junction_8	110.241141934398	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121477	149152244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
Isoform_14829_60	chr11	-	3365	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	42	2	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	2785	False	NA	NA	False	AATAAA	-13	NA	82761994	82694645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
Isoform_148299_3	chr5	+	943	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	194	114	194	-5	multi-exon	FALSE	canonical	3	24	junction_2	7.22841614740048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAAGCCCATGGCTCA	NA	False	NA	-94	True	AATAAA	-12	NA	149201770	149224849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
Isoform_14830_38	chr11	-	3404	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2745	False	NA	NA	False	AATAAA	-12	NA	82762034	82694646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
Isoform_148300_4	chr5	+	961	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	278	12	278	-12	multi-exon	FALSE	canonical	3	24	junction_2	7.22841614740048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCTAACGTCTTCAAGAG	NA	False	NA	8	True	ATTAAA	-20	NA	149201854	149224951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
Isoform_148302_3	chr5	+	918	4	ISM	ENSMUSG00000029658.18	ENSMUST00000202902.2	2574	23	67628	1	15583	-1	3prime_fragment	FALSE	canonical	1	2	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCAGATTCTCGCTGT	NA	False	NA	NA	False	NA	NA	NA	149520825	149535358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_149521054_149522668_149522863_149529753_149529852_149534960
Isoform_148303_12	chr5	+	1382	2	FSM	ENSMUSG00000106674.2	ENSMUST00000202583.2	299	2	-8	-1075	-8	1075	multi-exon	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTTGAGTCCTGGGTA	NA	False	NA	7	True	NA	NA	NA	149565066	149572330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149565217_149571098
Isoform_148306_589	chr5	+	1853	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	1	2716	1	-724	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTTTTCTCCATTG	NA	False	NA	19	True	AATAAA	-15	NA	149601695	149683348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
Isoform_148307_368	chr5	+	4555	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	14	1	14	-1	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	13	True	AATAAA	-21	NA	149601708	149686063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
Isoform_148316_6	chr5	+	10646	61	NIC	ENSMUSG00000056602.14	novel	4379	20	NA	NA	-58	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_34	8.06611568366226	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTTGTATTTTTATAT	1217	False	NA	6	True	ATTAAA	-12	NA	150119872	150421215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442_150317703_150318452_150318643_150319207_150319333_150321662_150321721_150322663_150322756_150322996_150323170_150324257_150324419_150325064_150325176_150326906_150327062_150328407_150328508_150328714_150328887_150336648_150336906_150337968_150338116_150339652_150339822_150341926_150342018_150346174_150346258_150349665_150349817_150350492_150350597_150351517_150351704_150353190_150353390_150355133_150355256_150356981_150357170_150358233_150358329_150360165_150360798_150362175_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
Isoform_148317_3	chr5	+	4449	32	NNC	ENSMUSG00000056602.14	novel	592	4	NA	NA	-52	-3484	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_31	3.83857413694026	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTGGCATTGTTTAAAA	1223	False	NA	NA	False	AATAAA	-30	NA	150119878	150333669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442_150317703_150318452_150318643_150319207_150319333_150321662_150321721_150322663_150322756_150322996_150323170_150324257_150324419_150325064_150325176_150326906_150327062_150328407_150328508_150328714_150328887_150333490
Isoform_148318_3	chr5	+	3641	15	ISM	ENSMUSG00000056602.14	ENSMUST00000239118.2	10618	61	150308	117	-5434	1	3prime_fragment	FALSE	canonical	3	26	junction_1	6.43650304346789	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGATCTCAGTTGATAA	NA	False	NA	NA	False	AATACA	-15	NA	150369160	150421101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
Isoform_148319_13	chr5	+	3729	15	ISM	ENSMUSG00000056602.14	ENSMUST00000239118.2	10618	61	150337	0	-5405	0	3prime_fragment	FALSE	canonical	3	26	junction_1	6.43650304346789	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATTTTTATATGTG	NA	False	NA	9	True	ATTAAA	-15	NA	150369189	150421218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
Isoform_14832_4	chr11	-	1684	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	-38	26	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCTCATTTGCCTAAAA	2705	False	NA	18	True	TTTAAA	-44	NA	82762074	82696406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
Isoform_148322_3	chr5	+	1221	3	ISM	ENSMUSG00000041147.11	ENSMUST00000202975.4	2534	8	-8	6664	-6	472	5prime_fragment	FALSE	canonical	3	58	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCTGTAACATTTATTA	364	False	NA	NA	False	AGTAAA	-16	NA	150446088	150453777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_150446362_150446639_150446745_150452934
Isoform_14833_5	chr11	-	3496	7	NNC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	70.7234441720393	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2736	False	NA	NA	False	AATAAA	-14	NA	82762043	82694644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82755078_82755160_82761833
Isoform_148330_24	chr5	+	10545	27	FSM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	-28	0	-14	0	multi-exon	TRUE	canonical	3	58	junction_1	34.4104188157733	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	356	False	NA	13	True	AATAAA	-22	NA	150446080	150493212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
Isoform_148331_6	chr5	+	10449	26	NIC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_11	37.9278051039076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	356	False	NA	13	True	AATAAA	-22	NA	150446080	150493212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
Isoform_148334_10	chr5	+	10736	27	FSM	ENSMUSG00000041147.11	ENSMUST00000044620.11	10724	27	-11	-1	-11	0	multi-exon	FALSE	canonical	3	12	junction_1	37.750504522668	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	359	False	NA	13	True	AATAAA	-22	NA	150446083	150493212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_150446556_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
Isoform_14834_4	chr11	-	3426	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	42	3	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	49.8341248543606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2785	False	NA	NA	False	AATAAA	-14	NA	82761994	82694644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82697016_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
Isoform_148349_31	chr5	+	5280	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	131	2006	43	-1181	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAGTCTAGAATGTT	NA	False	NA	NA	False	AATAAA	-21	NA	150597334	150732149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
Isoform_14835_82	chr11	-	2197	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	43	1186	18	852	multi-exon	FALSE	canonical	3	107	junction_4	12.9099444873581	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGGCCATCCATCTG	NA	False	NA	-11	True	AATAAA	-22	NA	82781397	82768710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
Isoform_148350_16	chr5	+	7263	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	121	33	33	-10	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTCATGTAATTATATTT	NA	False	NA	-23	True	AATAAA	-6	NA	150597324	150734122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
Isoform_148351_25	chr5	+	7047	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	142	228	54	-18	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCTTACAGCTTGCAA	NA	False	NA	4	True	ATTAAA	-18	NA	150597345	150733927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
Isoform_148358_3	chr5	+	5286	35	FSM	ENSMUSG00000034021.16	ENSMUST00000038900.15	7315	35	46	1983	46	-1181	multi-exon	FALSE	canonical	2	6	junction_32	36.1914961622709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAGTCTAGAATGTT	NA	False	NA	NA	False	AATAAA	-21	NA	150597337	150732149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724583_150724695_150729038_150729178_150731277
Isoform_148360_23	chr5	+	7310	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	127	-839	39	14	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTCATGTTTTGTGAT	NA	False	NA	24	True	AATATA	-11	NA	150597330	150734169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
Isoform_148363_27	chr5	+	5277	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	134	1187	46	-1187	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGCTTTTAATAGTCTAG	NA	False	NA	NA	False	AATAAA	-15	NA	150597337	150732143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
Isoform_148368_3	chr5	+	7199	34	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	55	5	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	31.2727566361149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTATGTGACTCAATA	NA	False	NA	-8	True	AATAAA	-21	NA	150597346	150734137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
Isoform_148369_4	chr5	+	1214	8	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	60	-18584	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	59.2597189135612	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGGATTAATGCTATGA	NA	False	NA	NA	False	AATAAA	-28	NA	150597351	150653494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150653071
Isoform_14837_59	chr11	-	2632	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	1	793	1	-793	multi-exon	TRUE	canonical	3	107	junction_4	12.9099444873581	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAACAAGACCTT	NA	False	NA	NA	False	AATAAA	-14	NA	82781439	82768317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
Isoform_148378_50	chr5	+	4305	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-3	intron_retention	FALSE	canonical	0	0	junction_5	687.180104553202	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTAATGAGTTTTTC	NA	False	NA	30	True	ATTAAA	-31	NA	108208607	108256867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_14838_96	chr11	-	1499	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-6	1933	-6	105	multi-exon	FALSE	canonical	3	107	junction_4	12.9099444873581	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATAGTGTCCTGGTCCTG	NA	False	NA	-2	True	AAGAAA	-17	NA	82781446	82769457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
Isoform_148388_62	chr5	+	4156	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	intron_retention	FALSE	canonical	0	0	junction_4	669.392660053375	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_108208730_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_1484_575	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	575	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV8003_+_0_8000
Isoform_148400_168	chr5	+	4103	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-3	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTAATGAGTTTTTC	NA	False	NA	30	True	ATTAAA	-31	NA	108208607	108256867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_148419_87	chr5	+	3875	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	574.951383451969	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTAATGAGTTTTTC	NA	False	NA	30	True	ATTAAA	-31	NA	108208607	108256867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_108208730_108228690_108228708_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_148439_885	chr5	+	3955	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-3	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTAATGAGTTTTTC	NA	False	NA	30	True	ATTAAA	-31	NA	108208607	108256867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_14846_558	chr11	-	1746	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	37	0	-32	0	multi-exon	FALSE	canonical	3	193	junction_4	34.6180548590215	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8340	False	NA	-6	True	AATAAA	-22	NA	82799200	82791593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_148461_61	chr5	+	3959	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-3	intron_retention	FALSE	canonical	3	616	junction_3	357.553592386612	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTAATGAGTTTTTC	NA	False	NA	30	True	ATTAAA	-31	NA	108208607	108256867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_108208730_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_148465_909	chr5	+	786	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1153	-6	at_least_one_novel_splicesite	FALSE	canonical	3	2118	junction_4	157.856540884437	909	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTTTGGTGATTGT	NA	False	NA	24	True	AATAAA	-15	NA	115603167	115612775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_115603279_115604200_115604380_115608840_115609001_115610051_115610180_115612567
Isoform_148467_71	chr5	+	784	5	NNC	ENSMUSG00000029522.13	novel	387	4	NA	NA	-1153	-5	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_2	919.936546724827	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTGGTGATTGTT	NA	False	NA	25	True	AATAAA	-16	NA	115603167	115612776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_115603279_115604200_115604380_115608843_115609001_115610051_115610180_115612567
Isoform_148468_77	chr5	+	626	4	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1153	-6	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_2	947.073738769409	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTTTGGTGATTGT	NA	False	NA	24	True	AATAAA	-15	NA	115603167	115612775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_115603279_115604200_115604380_115610051_115610180_115612567
Isoform_148470_33	chr5	+	1780	6	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	25	1	intron_retention	FALSE	canonical	3	76	junction_1	168.151122505917	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	16	True	AATAAA	-16	NA	100187868	100216620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_100188133_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
Isoform_148474_24	chr5	+	2721	5	NNC	ENSMUSG00000029326.14	novel	1420	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	76	junction_1	184.982431598247	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	16	True	AATAAA	-16	NA	100187902	100216620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_100188133_100206998_100207101_100208832_100210135_100211617_100211742_100215657
Isoform_148475_15	chr5	+	2680	5	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	-29	-69	intron_retention	FALSE	canonical	3	76	junction_1	184.982431598247	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTTATTCTGATGCAT	NA	False	NA	9	True	TATAAA	-20	NA	100187873	100216550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_100188133_100206998_100207101_100208832_100210135_100211617_100211742_100215657
Isoform_148493_63	chr5	+	1948	7	NNC	ENSMUSG00000053388.11	novel	1456	6	NA	NA	-1384	-22	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	2.86744175568088	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	135380764	135396837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392903_135392927_135395394_135395520_135395927
Isoform_148496_8	chr5	+	1943	7	NNC	ENSMUSG00000053388.11	novel	1803	6	NA	NA	-1382	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.25718035235908	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	135380766	135396837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392906_135392927_135395394_135395520_135395927
Isoform_148498_30	chr5	+	844	2	Intergenic	novelGene_8800	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGCTGGCAAACCTT	651	False	NA	40	True	CATAAA	-17	NA	115341970	115343348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115342214_115342747
Isoform_14850_15	chr11	-	1754	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-23	0	intron_retention	TRUE	canonical	3	35	junction_3	68.7710298414568	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8349	False	NA	-6	True	AATAAA	-22	NA	82799191	82791593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82791877_82792382_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_148500_6	chr5	+	1825	4	Intergenic	novelGene_8802	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	30.169889330626	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGAGCATGCCATCTG	664	False	NA	2	True	NA	NA	NA	115341983	115344404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115342214_115342747_115343613_115343634_115344143_115344182
Isoform_148501_45	chr5	+	4053	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6075	0	intron_retention	FALSE	canonical	3	45	junction_1	214.878516514574	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32774753	32844401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_32774875_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
Isoform_148508_21	chr5	+	3207	3	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	654	-480	intron_retention	FALSE	canonical	3	20	junction_1	268	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTGCAGTTTTTTGGT	5622	False	NA	16	True	ATTAAA	-16	NA	105849385	105962596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_105849441_105880095_105880241_105959589
Isoform_14851_15	chr11	-	1830	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	32	-2	intron_retention	FALSE	canonical	3	193	junction_3	35.3303184950076	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCAGCTTCTTGTTC	8335	False	NA	-8	True	AATAAA	-20	NA	82799205	82791595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82791877_82792382_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_148512_5	chr5	+	2869	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8054	-638	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	59.4603280536266	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCATATTTTTGAGTT	NA	False	NA	NA	False	TATAAA	-19	NA	8761764	8797932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_8762145_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_148516_5	chr5	+	1924	15	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	28092	6	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	24.8293152938051	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAGCCTAAGAATGTG	NA	False	NA	11	True	AAAACA	-14	NA	35943486	36015536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_35943629_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169
Isoform_148517_3	chr5	+	2742	15	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	28085	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	30.4594075813053	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTAGTCTCACATCAAC	NA	False	NA	NA	False	AATAAA	-14	NA	35943479	36041808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_35943629_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_148518_9	chr5	+	4031	4	Intergenic	novelGene_8742	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGTGCCCAAAAAAGGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	110014585	110033378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
Isoform_148520_3	chr5	+	4494	4	Intergenic	novelGene_8740	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTTTAGAGGAAATTT	NA	False	NA	NA	False	AGTAAA	-19	NA	110014577	110033833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
Isoform_148521_10	chr5	+	765	2	Intergenic	novelGene_8741	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACTGACTGTTTTGCT	NA	False	NA	NA	False	AGTAAA	-14	NA	110014585	110018023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110014679_110017351
Isoform_148523_36	chr5	+	2092	12	Fusion	ENSMUSG00000113373.2_ENSMUSG00000063646.19	novel	516	2	NA	NA	2843	-3	multi-exon	FALSE	canonical	3	13	junction_1	47.5912346954217	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGCCTTTTTTATTT	3224	False	NA	14	True	AATAAA	-17	NA	37245556	37282640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr5_+_37245651_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_148528_4	chr5	+	4230	2	Intergenic	novelGene_8945	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGCTAATCCTAGAATG	9031	False	NA	6	True	NA	NA	NA	125451148	125456613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_125454786_125456020
Isoform_14854_11	chr11	-	2267	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	19	1	intron_retention	FALSE	canonical	3	193	junction_3	36.097892614939	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGCAGCTTCTTGTT	8322	False	NA	-9	True	AATAAA	-19	NA	82799218	82791596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_148540_28	chr5	+	1415	6	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-257	-1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	91.0173609812985	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	7181	False	NA	9	True	ATTAAA	-16	NA	8901129	8916314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_8901271_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_14855_21	chr11	-	2254	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-21	0	intron_retention	FALSE	canonical	3	35	junction_2	72.0513705629532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8351	False	NA	-10	True	AATAAA	-18	NA	82799189	82791597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_148554_15	chr5	+	818	2	Intergenic	novelGene_8801	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGCTGGCAAACCTT	653	False	NA	40	True	CATAAA	-17	NA	115341972	115343348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115342190_115342747
Isoform_148556_7	chr5	+	2165	13	NNC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	43.2540139434738	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTTTTCAGAAGCTGAC	NA	False	NA	25	True	AATAAA	-18	NA	107745586	107809703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_107745611_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
Isoform_148558_10	chr5	+	2285	7	NNC	ENSMUSG00000040584.9	novel	494	2	NA	NA	-53	-52	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	78.9460082728837	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8783234	8798518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_8783506_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_148559_3	chr5	+	1772	7	NNC	ENSMUSG00000040584.9	novel	494	2	NA	NA	-133	-645	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	78.9460082728837	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGAGCATTCATATTT	NA	False	NA	NA	False	TATAAA	-12	NA	8783154	8797925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_8783506_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_14856_20	chr11	-	2325	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-24	0	intron_retention	FALSE	canonical	3	193	junction_2	37.0264770130781	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8348	False	NA	-6	True	AATAAA	-22	NA	82799192	82791593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_148561_22	chr5	+	2685	3	NNC	ENSMUSG00000054720.13	novel	6976	4	NA	NA	-13491	2085	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	10.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAAAGTTTTATTTG	8879	False	NA	NA	False	AATAAA	-27	NA	105693232	105756823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_105693317_105727333_105727476_105754364
Isoform_148564_5	chr5	+	3433	2	Genic_Genomic	ENSMUSG00000061118.9	novel	1661	1	NA	NA	40	3136	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	3172	False	NA	NA	False	NA	NA	NA	135093095	135097852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_135094257_135095580
Isoform_148565_10	chr5	+	1180	3	Intergenic	novelGene_8757	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	4	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAGAGACAAGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	110615121	110625311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110615829_110622235_110622403_110625005
Isoform_148569_7	chr5	+	1686	6	NNC	ENSMUSG00000029681.13	novel	907	3	NA	NA	410	-10	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	100.312711058968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTAGTACTTGACAGCT	9241	False	NA	19	True	ATTAAA	-14	NA	135197708	135210699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_135197963_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
Isoform_148571_5	chr5	+	3155	14	NNC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	25.1993237440961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490977	112526279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_112491367_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_148572_8	chr5	+	1906	10	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	50381	48	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	5.55999822364302	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAACCAATTCAGACATC	4813	False	NA	NA	False	AATAAA	-18	NA	103727812	103746217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_103727978_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
Isoform_148573_5	chr5	+	1962	3	Intergenic	novelGene_8947	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	7	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAGAATGCTGTCATT	9032	False	NA	14	True	NA	NA	NA	125451149	125456621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_125452329_125454603_125454786_125456020
Isoform_148577_13	chr5	+	549	4	NNC	ENSMUSG00000106918.4	novel	638	4	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	962.363179308565	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTTGTCTCTTAGAGG	NA	False	NA	16	True	AATAAA	-19	NA	31771342	31779985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_31771501_31771946_31771966_31773724_31773832_31779720
Isoform_148582_9	chr5	+	2119	12	Fusion	ENSMUSG00000113373.2_ENSMUSG00000063646.19	novel	516	2	NA	NA	2843	0	multi-exon	FALSE	canonical	3	9	junction_1	48.7096304561383	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	3224	False	NA	17	True	AATAAA	-20	NA	37245556	37282643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr5_+_37245675_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_148584_9	chr5	+	2224	11	NNC	ENSMUSG00000029482.5	novel	527	3	NA	NA	-1299	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.0616604997733	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCAGTACGCGTGTGT	NA	False	NA	5	True	AATAAA	-22	NA	125585257	125594469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_125585326_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
Isoform_148587_8	chr5	+	3264	2	Antisense	novelGene_ENSMUSG00000043913.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTTGCCTTCTGA	NA	False	NA	NA	False	AATAAA	-23	NA	116370518	116376264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_116370876_116373357
Isoform_148588_5	chr5	+	3167	3	Intergenic	novelGene_8946	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	10	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAGAATGCTGTCATT	9031	False	NA	14	True	NA	NA	NA	125451148	125456621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_125453533_125454603_125454786_125456020
Isoform_148591_5	chr5	+	3235	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8482	-63	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	61.2864219073367	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATATCCATAA	NA	False	NA	NA	False	AATAAA	-10	NA	8761336	8798507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_8761508_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_148594_3	chr5	+	8496	28	NNC	ENSMUSG00000029361.19	novel	631	3	NA	NA	-25865	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	11.5606588920876	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCCGGCTGGTGT	3517	False	NA	11	True	ATTAAA	-18	NA	118031374	118096905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_118031437_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862_118095050_118095095
Isoform_148600_6	chr5	+	2493	10	NNC	ENSMUSG00000029291.12	novel	619	2	NA	NA	-11875	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	30.6159000085468	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATTGTGTTGGTTGTCT	119	False	NA	10	True	AATAAA	-14	NA	88782674	88799250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_88782879_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
Isoform_148602_6	chr5	+	2357	3	NNC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	9527	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	30.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCTGACTTGAGGTT	NA	False	NA	4	True	ATTAAA	-9	NA	145154904	145158554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_145154973_145155096_145155694_145156862
Isoform_148603_5	chr5	+	2445	4	NNC	ENSMUSG00000034173.14	novel	2492	4	NA	NA	64	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2142.10711424263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACCCTGTCTCAAAAAA	6124	False	NA	NA	False	AATAAA	-12	NA	129924682	129932459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_129924771_129928023_129928274_129929185_129929337_129930503
Isoform_148606_3	chr5	+	2523	13	NNC	ENSMUSG00000029635.16	novel	1976	6	NA	NA	-290	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.6113406787385	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATGGTGTCAACTATA	NA	False	NA	NA	False	AATAAA	-18	NA	146167749	146239682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_146167835_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_148610_3	chr5	+	2598	6	NNC	ENSMUSG00000044017.17	novel	5163	26	NA	NA	100813	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.5682722225231	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTAGAGTCTTGAGCG	NA	False	NA	24	True	AATAAA	-12	NA	129274633	129281658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_129274747_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
Isoform_148611_3	chr5	+	2488	3	NNC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	9358	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCTGACTTGAGGTT	NA	False	NA	4	True	ATTAAA	-9	NA	145154735	145158554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_145154935_145155096_145155694_145156862
Isoform_148612_5	chr5	+	653	4	Antisense	novelGene_ENSMUSG00000029207.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACACGTGCTTGTATCTT	NA	False	NA	NA	False	NA	NA	NA	66499850	66502878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_66499939_66500078_66500212_66500896_66500982_66502531
Isoform_148613_5	chr5	+	1802	3	Antisense	novelGene_ENSMUSG00000080002.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	60	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGGTTGCCTGATAG	NA	False	NA	NA	False	AATAAA	-19	NA	149578329	149588009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_149578485_149584119_149584669_149586911
Isoform_148614_3	chr5	+	2855	13	NNC	ENSMUSG00000029314.15	novel	3035	12	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7.60984377120991	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGCATTATTCTTC	NA	False	NA	5	True	AATAAA	-16	NA	100993545	101046965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_100993660_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
Isoform_148615_5	chr5	+	2030	2	NNC	ENSMUSG00000036599.11	novel	2331	2	NA	NA	-2373	-487	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCATTCCTGTGGTT	NA	False	NA	18	True	AGTAAA	-14	NA	140488931	140510992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_140489265_140509295
Isoform_148616_4	chr5	+	1025	8	NNC	ENSMUSG00000013622.16	novel	894	7	NA	NA	248	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.237726562924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGCTGCCGTACCTGT	1306	False	NA	7	True	AATAAA	-20	NA	31206376	31211962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_31206430_31206473_31206607_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
Isoform_148622_3	chr5	+	1772	3	Antisense	novelGene_ENSMUSG00000080002.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATGTGTGGTTGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	149578378	149588004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_149578509_149584119_149584669_149586911
Isoform_148625_4	chr5	-	246	1	Intergenic	novelGene_8324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAAACGTTTTATTGGA	NA	False	NA	NA	False	NA	NA	NA	3367756	3367510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_3367500_3367800
Isoform_148626_53	chr5	+	190	1	Intergenic	novelGene_8456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATTTGGTTGTGTGGC	6333	False	NA	NA	False	NA	NA	NA	34416798	34416988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_34416800_34417000
Isoform_148629_6	chr5	-	177	1	Intergenic	novelGene_8457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTTCAA	6175	False	NA	NA	False	NA	NA	NA	34489137	34488960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_34489000_34489100
Isoform_148631_8	chr5	-	3146	1	Intergenic	novelGene_8458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAGAAAAAAA	7307	False	NA	NA	False	NA	NA	NA	34493526	34490380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_34490400_34493500
Isoform_14865_8	chr11	-	5888	4	NIC	ENSMUSG00000069793.13	novel	2128	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	11	junction_3	15.8394724940223	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGAATTTGTCTTTAA	8620	False	NA	-7	True	NA	NA	NA	82881963	82869216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_82873704_82875382_82875518_82878064_82879135_82881767
Isoform_148651_19	chr5	-	3417	1	Intergenic	novelGene_8459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	7699	False	NA	NA	False	NA	NA	NA	34518463	34515046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_34515000_34518500
Isoform_148652_13	chr5	-	257	1	Intergenic	novelGene_8460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAATGTTTTGTTTATTC	4217	False	NA	NA	False	NA	NA	NA	34521945	34521688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_34521700_34521900
Isoform_148654_29	chr5	+	210	1	Intergenic	novelGene_8461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGAGGACCTGGGCTTA	NA	False	NA	NA	False	NA	NA	NA	34523288	34523498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_34523300_34523500
Isoform_148655_19	chr5	+	178	1	Intergenic	novelGene_8462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTTAATGTATAGC	1111	False	NA	NA	False	NA	NA	NA	34531760	34531938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_34531800_34531900
Isoform_148656_327	chr6	+	173	1	Intergenic	novelGene_9705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTGTTAGA	NA	False	NA	NA	False	NA	NA	NA	137640401	137640574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_137640400_137640600
Isoform_148657_4	chr5	+	400	1	NIC	ENSMUSG00000054099.12	novel	2784	12	NA	NA	-7	-5369	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGGGTTTTTCATCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	8472865	8473265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_8472900_8473300
Isoform_148659_460	chr4	-	232	1	Intergenic	novelGene_7562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	460	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAGAGACCACGC	NA	False	NA	NA	False	NA	NA	NA	48406202	48405970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_48406000_48406200
Isoform_148660_3	chr5	-	204	1	Intergenic	novelGene_8463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAATGAAAAAG	NA	False	NA	NA	False	AAAACA	-28	NA	34739007	34738803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_34738800_34739000
Isoform_148661_6	chr5	-	1063	1	Intergenic	novelGene_8464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGAAAAGGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	34743359	34742296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_34742300_34743400
Isoform_148665_5	chr5	+	182	1	Intergenic	novelGene_8465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGTTCAAACAAAA	842	False	NA	NA	False	NA	NA	NA	34821986	34822168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_34822000_34822200
Isoform_148666_3	chr5	+	2613	1	NIC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	7	-23214	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8641	False	NA	NA	False	NA	NA	NA	35106798	35109411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_35106800_35109400
Isoform_148667_68	chr8	-	162	1	Intergenic	novelGene_10894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATTTTAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	107687071	107686909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107686900_107687100
Isoform_14867_6	chr11	-	3878	5	FSM	ENSMUSG00000035208.17	ENSMUST00000130822.3	2128	5	10	-1760	10	31	multi-exon	FALSE	canonical	0	0	junction_1	6.75925291729789	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGGGTGGGTAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	82910924	82892952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_82894716_82894882_82895607_82904190_82904326_82907478_82908549_82910738
Isoform_148672_6	chr5	+	2719	1	FSM	ENSMUSG00000045318.7	ENSMUST00000049545.7	3445	1	724	2	724	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCAGGTGCATTGGTC	NA	False	NA	NA	False	AATAAA	-13	NA	35436386	35439105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_35436400_35439100
Isoform_148673_6	chr5	+	175	1	Intergenic	novelGene_8468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	35639158	35639333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_35639200_35639300
Isoform_148674_18	chr5	+	180	1	Intergenic	novelGene_8469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGACAATTAAG	NA	False	NA	NA	False	NA	NA	NA	35699579	35699759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_35699600_35699800
Isoform_148675_10	chr5	-	175	1	Intergenic	novelGene_8470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGGAAAAAGAAAAGA	3259	False	NA	NA	False	NA	NA	NA	35736781	35736606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_35736600_35736800
Isoform_148676_5	chr5	-	3889	1	Genic_Genomic	ENSMUSG00000036553.17	novel	NA	NA	NA	NA	-57	-13088	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35897388	35893499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_35893500_35897400
Isoform_148677_4	chr5	-	170	1	Intergenic	novelGene_8471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGAGCAGGGCTGACC	NA	False	NA	NA	False	NA	NA	NA	35899934	35899764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_35899800_35899900
Isoform_148678_17	chr5	+	178	1	Intergenic	novelGene_8472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35909493	35909671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_35909500_35909700
Isoform_148679_25	chr4	+	157	1	Intergenic	novelGene_7714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAATAAAAAAAAAAA	9607	False	NA	NA	False	NA	NA	NA	107078302	107078459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_107078300_107078500
Isoform_148681_9	chr5	-	169	1	Intergenic	novelGene_8335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTTAAAAAAAAAAAAG	7737	False	NA	NA	False	NA	NA	NA	8615290	8615121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_8615100_8615300
Isoform_148682_3	chr5	-	194	1	Intergenic	novelGene_8473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	7901	False	NA	NA	False	NA	NA	NA	36522718	36522524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_36522500_36522700
Isoform_148687_4	chr5	+	2204	1	FSM	ENSMUSG00000050677.3	ENSMUST00000060100.3	3585	1	1	1380	1	-1380	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTGACCTGATTAGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	36641932	36644136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_36641900_36644100
Isoform_148690_16	chr5	+	1458	1	Antisense	novelGene_ENSMUSG00000029192.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCACCTAT	NA	False	NA	NA	False	NA	NA	NA	36687320	36688778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_36687300_36688800
Isoform_148692_6	chr5	-	210	1	Intergenic	novelGene_8474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATGGCTTTTCTTTAC	7882	False	NA	NA	False	NA	NA	NA	36712933	36712723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_36712700_36712900
Isoform_148694_17	chr5	-	185	1	Intergenic	novelGene_8475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATACAATGAGC	2092	False	NA	NA	False	NA	NA	NA	36746574	36746389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_36746400_36746600
Isoform_148695_40	chr5	+	178	1	Intergenic	novelGene_8476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAAAGTTTTCTATA	NA	False	NA	NA	False	NA	NA	NA	36890429	36890607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_36890400_36890600
Isoform_148696_3	chr5	-	2672	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	-28	-1371	-28	1371	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAAGTACACATCGATT	NA	False	NA	NA	False	AATAAA	-15	NA	36906022	36903350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36903400_36906000
Isoform_148698_114	chr5	-	1277	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	-3	-1	-3	1	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTCCTTCTGGAGATT	NA	False	NA	-3	True	ATTAAA	-20	NA	36905997	36904720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36904700_36906000
Isoform_148699_148	chr5	-	1025	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	-14	262	-14	-262	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGGTTCAGTTTTCTGT	NA	False	NA	-1	True	ATTAAA	-20	NA	36906008	36904983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_36905000_36906000
Isoform_148700_9	chr5	+	234	1	Intergenic	novelGene_8477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATATTAAAACAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	36912051	36912285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_36912100_36912300
Isoform_14871_4	chr11	-	2560	3	FSM	ENSMUSG00000018733.11	ENSMUST00000176518.2	2501	3	-58	-1	3	0	multi-exon	FALSE	canonical	3	48	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2413	False	NA	-7	True	AATAAA	-16	NA	83189781	83185900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_83187267_83188313_83188868_83189141
Isoform_148710_17	chr17	+	169	1	Intergenic	novelGene_5040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAGTCTTAAAAAAA	6327	False	NA	NA	False	NA	NA	NA	50602824	50602993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_50602800_50603000
Isoform_148711_14	chr5	-	153	1	Intergenic	novelGene_8479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATACAGAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	37048743	37048590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_37048600_37048700
Isoform_148712_3	chr5	-	299	1	Intergenic	novelGene_8480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTTGATCTGGGG	NA	False	NA	NA	False	NA	NA	NA	37059216	37058917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_37058900_37059200
Isoform_148713_66	chr5	-	164	1	Intergenic	novelGene_8481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTGAGCAAGCGGAGTT	NA	False	NA	NA	False	NA	NA	NA	37059217	37059053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_37059100_37059200
Isoform_148720_25	chr5	-	169	1	Intergenic	novelGene_8482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	37422424	37422255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_37422300_37422400
Isoform_148721_32	chr5	+	158	1	Intergenic	novelGene_8483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	37622527	37622685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_37622500_37622700
Isoform_148723_18	chr5	-	183	1	Intergenic	novelGene_8484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	37947214	37947031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_37947000_37947200
Isoform_148726_62	chr5	+	178	1	Intergenic	novelGene_8485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38075966	38076144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_38076000_38076100
Isoform_148727_4	chr5	-	177	1	Intergenic	novelGene_8486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTCTTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	38286260	38286083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_38286100_38286300
Isoform_14873_36	chr11	-	2374	4	FSM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	15	0	11	0	multi-exon	FALSE	canonical	3	23	junction_3	16.4991582276861	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2441	False	NA	-7	True	AATAAA	-16	NA	83189753	83185900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189537
Isoform_148730_5	chr5	+	178	1	Intergenic	novelGene_8487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATTCTCCAAATCT	NA	False	NA	NA	False	NA	NA	NA	38594963	38595141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_38595000_38595100
Isoform_148731_16	chr5	-	4037	2	NNC	ENSMUSG00000005103.13	novel	353	2	NA	NA	-63	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38719041	38714984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_38716326_38716345
Isoform_148732_6	chr5	-	4102	2	NNC	ENSMUSG00000005103.13	novel	353	2	NA	NA	44	-6	intron_retention	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38719105	38714983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_38716326_38716345
Isoform_148734_3	chr5	+	176	1	Intergenic	novelGene_8488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGCCAAAA	NA	False	NA	NA	False	NA	NA	NA	38820448	38820624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_38820400_38820600
Isoform_14874_20	chr11	-	2267	4	FSM	ENSMUSG00000018733.11	ENSMUST00000018877.9	2729	4	29	433	-6	0	multi-exon	FALSE	canonical	3	9	junction_3	22.7596133534821	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2420	False	NA	-7	True	AATAAA	-16	NA	83189774	83185900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189665
Isoform_14875_7	chr11	-	2223	4	NIC	ENSMUSG00000018733.11	novel	2729	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	26.8700576850888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGACTTCTTGAAGTT	2391	False	NA	-8	True	AATAAA	-15	NA	83189803	83185901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_83187267_83188313_83188868_83189141_83189380_83189737
Isoform_148775_10	chr5	-	5306	1	NIC	ENSMUSG00000046572.11	novel	6816	3	NA	NA	1	-4817	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	38842092	38836786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_38836800_38842100
Isoform_148777_3	chr5	+	1676	1	NIC	ENSMUSG00000028970.10	novel	3181	22	NA	NA	0	-13829	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAATACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8848146	8849822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_8848100_8849800
Isoform_148778_4	chr5	-	156	1	Intergenic	novelGene_8489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGAGTTAAA	4810	False	NA	NA	False	NA	NA	NA	38871922	38871766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_38871800_38871900
Isoform_148779_5	chr5	+	293	1	Intergenic	novelGene_8490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGGATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	38887309	38887602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_38887300_38887600
Isoform_148780_16	chr5	-	192	1	Antisense	novelGene_ENSMUSG00000082938.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGGCTGTCCTGGA	NA	False	NA	NA	False	NA	NA	NA	40485784	40485592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_40485600_40485800
Isoform_148783_7	chr5	+	172	1	Intergenic	novelGene_8491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAAAATGGTAATAGG	NA	False	NA	NA	False	NA	NA	NA	43710067	43710239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_43710100_43710200
Isoform_148787_23	chr5	-	2342	1	NIC	ENSMUSG00000039753.17	novel	2801	11	NA	NA	-4	-11663	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	8865	False	NA	NA	False	AATAAA	-24	NA	43939455	43937113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_43937100_43939500
Isoform_148788_3	chr5	+	886	1	FSM	ENSMUSG00000029084.6	ENSMUST00000196600.2	881	1	-2	-3	-2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAAAAAACAAGCC	NA	False	NA	NA	False	NA	NA	NA	44026199	44027085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_44026200_44027100
Isoform_148789_123	chr5	+	744	1	FSM	ENSMUSG00000033036.10	ENSMUST00000122204.3	774	1	6	24	3	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGCAAAAAACAAAACAAA	NA	False	NA	NA	False	AATAAA	-12	NA	44070491	44071235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_44070500_44071200
Isoform_148790_5	chr5	-	170	1	Intergenic	novelGene_8492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACGTGG	9307	False	NA	NA	False	NA	NA	NA	44080241	44080071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_44080100_44080200
Isoform_148791_4	chr5	+	1646	1	NIC	ENSMUSG00000104784.2	novel	987	2	NA	NA	204	-15112	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCATTGTGGAAAGACCTG	NA	False	NA	NA	False	NA	NA	NA	44384132	44385778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_44384100_44385800
Isoform_148793_4	chr5	+	225	1	Intergenic	novelGene_8493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTTTTTAAAAATTCAAG	NA	False	NA	NA	False	NA	NA	NA	45416827	45417052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_45416800_45417100
Isoform_148798_4	chr5	-	2376	1	Antisense	novelGene_ENSMUSG00000015804.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45683781	45681405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_45681400_45683800
Isoform_14880_66	chr11	-	1420	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	26	1	26	-1	multi-exon	FALSE	canonical	3	59	junction_2	13.5	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTTATTAATCATTTT	NA	False	NA	-15	True	AATAAA	-14	NA	83959157	83938867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_83940137_83941657_83941747_83959095
Isoform_148800_10	chr5	+	6863	1	Intergenic	novelGene_8494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACCAGAAATGAATCAG	NA	False	NA	NA	False	NA	NA	NA	46005159	46012022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_46005200_46012000
Isoform_148802_7	chr5	+	1158	1	FSM	ENSMUSG00000079067.6	ENSMUST00000120716.2	279	1	-88	-791	-88	791	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCTTGGGAAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	84271083	84272241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_84271100_84272200
Isoform_148803_3	chr5	-	5566	1	Genic_Genomic	ENSMUSG00000029088.17	novel	NA	NA	NA	NA	101195	3998	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	48548411	48542845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_48542800_48548400
Isoform_148805_56	chr5	+	177	1	Genic_Genomic	ENSMUSG00000114430.2	novel	NA	NA	NA	NA	1045	91	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	9086168	9086345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_9086200_9086300
Isoform_148806_74	chr5	-	217	1	Intergenic	novelGene_8495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	50610734	50610517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_50610500_50610700
Isoform_148809_11	chr5	+	1668	1	Intergenic	novelGene_8496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	TTTAAA	-8	NA	52335331	52336999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_52335300_52337000
Isoform_148810_8	chr5	+	178	1	ISM	ENSMUSG00000097145.6	ENSMUST00000180601.6	2120	4	7111	17	7077	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAAACTGGAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	52355131	52355309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_52355100_52355300
Isoform_148812_31	chr5	-	178	1	Intergenic	novelGene_8497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	52434485	52434307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_52434300_52434500
Isoform_148813_177	chr5	+	177	1	Intergenic	novelGene_8588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	85906610	85906787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_85906600_85906800
Isoform_148814_62	chr5	-	180	1	Intergenic	novelGene_8498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGTCACTTGATG	NA	False	NA	NA	False	NA	NA	NA	52751540	52751360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_52751400_52751500
Isoform_148815_3	chr5	-	1919	1	Antisense	novelGene_ENSMUSG00000029179.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52943524	52941605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_52941600_52943500
Isoform_148816_7	chr5	+	1330	1	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	-5	-13169	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	52991462	52992792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_52991500_52992800
Isoform_148817_19	chr5	+	2083	1	FSM	ENSMUSG00000061461.12	ENSMUST00000204839.2	2076	1	-6	-1	-6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	3453	False	NA	NA	False	NA	NA	NA	53424525	53426608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_53424500_53426600
Isoform_148818_26	chr5	+	213	1	Intergenic	novelGene_8499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAGGGCATTGTTGAG	NA	False	NA	NA	False	ATTAAA	-9	NA	53663865	53664078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_53663900_53664100
Isoform_148821_32	chr5	-	180	1	Antisense	novelGene_ENSMUSG00000039191.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	53758303	53758123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_53758100_53758300
Isoform_148842_9	chr5	+	174	1	Intergenic	novelGene_8500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	53824307	53824481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_53824300_53824500
Isoform_148843_4	chr5	+	171	1	FSM	ENSMUSG00000079659.6	ENSMUST00000200542.2	5254	1	3593	1490	3593	1416	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAACAAAAATACCAA	NA	False	NA	NA	False	NA	NA	NA	9209325	9209496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_9209300_9209500
Isoform_148845_5	chr5	+	177	1	Intergenic	novelGene_8501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATGTATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54237945	54238122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_54237900_54238100
Isoform_148846_3	chr5	-	173	1	Intergenic	novelGene_8502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTTTAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55595209	55595036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_55595000_55595200
Isoform_148847_7	chr5	+	175	1	Intergenic	novelGene_8503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATATATATAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	55762017	55762192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_55762000_55762200
Isoform_148848_4	chr5	+	3235	1	Intergenic	novelGene_8337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGCCAAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9211844	9215079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_9211800_9215100
Isoform_148850_4	chr5	-	178	1	Intergenic	novelGene_8504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	61590483	61590305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_61590300_61590500
Isoform_148854_15	chr5	+	183	1	Intergenic	novelGene_8505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGACATTGAGACA	NA	False	NA	NA	False	NA	NA	NA	63770974	63771157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_63771000_63771200
Isoform_148855_14	chr5	+	182	1	Intergenic	novelGene_8506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAAATGAAC	NA	False	NA	NA	False	NA	NA	NA	63803305	63803487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_63803300_63803500
Isoform_14886_828	chr11	-	2110	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	39	2	39	-2	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020387	83969747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
Isoform_148866_6	chr5	-	176	1	Intergenic	novelGene_8507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATCAGAAACTGTG	NA	False	NA	NA	False	NA	NA	NA	64232996	64232820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_64232800_64233000
Isoform_148869_29	chr5	+	193	1	Intergenic	novelGene_8338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGTAAAAGGTTAATG	NA	False	NA	NA	False	NA	NA	NA	9917142	9917335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_9917100_9917300
Isoform_14887_170	chr11	-	2178	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	-29	2	-29	-2	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020455	83969747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
Isoform_148871_3	chr5	-	3601	1	Intergenic	novelGene_8508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTATCAGGAGAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	64569021	64565420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_64565400_64569000
Isoform_148873_3	chr5	-	156	1	Intergenic	novelGene_8509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTTAA	2661	False	NA	NA	False	NA	NA	NA	64862891	64862735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_64862700_64862900
Isoform_148874_4	chr5	-	1788	1	FSM	ENSMUSG00000097640.8	ENSMUST00000200143.2	1460	1	-317	-11	-36	11	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTAGTTCTGTGTAA	NA	False	NA	NA	False	AATAAA	-25	NA	64961496	64959708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_64959700_64961500
Isoform_148877_4	chr5	-	4846	1	Antisense	novelGene_ENSMUSG00000029178.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCCCAATACGGTGCAGA	NA	False	NA	NA	False	AGTAAA	-44	NA	64983119	64978273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_64978300_64983100
Isoform_14888_82	chr11	-	2388	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	11	-248	11	248	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAAGTAAAGCCGCTTT	NA	False	NA	-27	True	AATAAA	-12	NA	84020415	83969497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
Isoform_148886_12	chr5	+	166	1	Intergenic	novelGene_8510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACAGT	NA	False	NA	NA	False	NA	NA	NA	65060727	65060893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_65060700_65060900
Isoform_148893_10	chr5	+	156	1	Intergenic	novelGene_8341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11629390	11629546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_11629400_11629500
Isoform_148894_8	chr5	+	182	1	Intergenic	novelGene_8511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	65489913	65490095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_65489900_65490100
Isoform_148896_18	chr5	-	184	1	Intergenic	novelGene_8512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	65496822	65496638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65496600_65496800
Isoform_148900_18	chr5	-	3337	1	Antisense	novelGene_ENSMUSG00000029199.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-38	NA	65553323	65549986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_65550000_65553300
Isoform_148901_52	chr5	-	174	1	Intergenic	novelGene_8513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATATAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	65572546	65572372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65572400_65572500
Isoform_148902_348	chr5	+	175	1	Intergenic	novelGene_8514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGGA	3956	False	NA	NA	False	NA	NA	NA	65582968	65583143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_65583000_65583100
Isoform_148904_9	chr5	+	160	1	Intergenic	novelGene_8515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	65628058	65628218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_65628100_65628200
Isoform_148906_3	chr5	+	158	1	Intergenic	novelGene_8339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11074540	11074698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_11074500_11074700
Isoform_148907_5	chr5	-	4736	1	FSM	ENSMUSG00000037822.13	ENSMUST00000198981.3	3456	1	604	-1884	75	1884	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65650139	65645403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65645400_65650100
Isoform_148910_3	chr5	+	179	1	Intergenic	novelGene_8516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTCTCCA	NA	False	NA	NA	False	NA	NA	NA	65673663	65673842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_65673700_65673800
Isoform_148911_8	chr12	-	177	1	Intergenic	novelGene_2593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATTTAAACATTT	6025	False	NA	NA	False	NA	NA	NA	69316270	69316093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_69316100_69316300
Isoform_148912_4	chr5	+	167	1	Antisense	novelGene_ENSMUSG00000105601.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATATAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65692990	65693157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_65693000_65693200
Isoform_148915_38	chr5	+	179	1	Intergenic	novelGene_8340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	11162081	11162260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_11162100_11162300
Isoform_148916_3	chr5	-	310	1	Intergenic	novelGene_8517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	65709725	65709415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65709400_65709700
Isoform_148918_46	chr5	-	170	1	Intergenic	novelGene_8518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65710801	65710631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65710600_65710800
Isoform_148919_3	chr5	-	180	1	Intergenic	novelGene_8519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAATACA	8840	False	NA	NA	False	NA	NA	NA	65743323	65743143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65743100_65743300
Isoform_148920_96	chr5	-	176	1	Intergenic	novelGene_8520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAGTTAGGA	5106	False	NA	NA	False	NA	NA	NA	65747057	65746881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65746900_65747100
Isoform_148928_20	chr5	-	173	1	FSM	ENSMUSG00000029202.13	ENSMUST00000201673.2	6051	1	-165	6043	-165	3494	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTTTTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	65769281	65769108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_65769100_65769300
Isoform_14893_18	chr11	-	2094	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	142.244346396026	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGGGTGTGTCAGATA	NA	False	NA	-5	True	ATTAAA	-16	NA	84020430	83969746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84011907_84012015_84017813_84017922_84020362
Isoform_148932_7	chr5	+	200	1	Intergenic	novelGene_8521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGCTCTCTTTAGTAAA	NA	False	NA	NA	False	NA	NA	NA	65841823	65842023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_65841800_65842000
Isoform_148934_18	chr5	-	250	1	Intergenic	novelGene_8522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTTTTAAAATAAAAAAAT	NA	False	NA	NA	False	AAAAAG	-12	NA	65874637	65874387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65874400_65874600
Isoform_148936_10	chr5	-	226	1	Intergenic	novelGene_8523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCCACTATGCCTAACG	8875	False	NA	NA	False	NA	NA	NA	65901657	65901431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65901400_65901700
Isoform_148937_121	chr5	-	185	1	Intergenic	novelGene_8524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAAAGCAAGCT	4966	False	NA	NA	False	NA	NA	NA	65924285	65924100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65924100_65924300
Isoform_148940_10	chr5	-	177	1	Intergenic	novelGene_8525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCCAAGACAAG	4195	False	NA	NA	False	NA	NA	NA	65931463	65931286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_65931300_65931500
Isoform_148944_26	chr5	-	177	1	Intergenic	novelGene_8342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12387200	12387023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_12387000_12387200
Isoform_148946_4	chr5	-	174	1	Intergenic	novelGene_8526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTTTTTTTAAAGATG	7381	False	NA	NA	False	NA	NA	NA	66090683	66090509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_66090500_66090700
Isoform_148947_47	chr5	-	182	1	Intergenic	novelGene_8527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAGGTAGAGAC	9904	False	NA	NA	False	NA	NA	NA	66141029	66140847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_66140800_66141000
Isoform_148948_3	chr5	-	2397	3	Intergenic	novelGene_8343	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12428284	12425841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_12426669_12426688_12426749_12426774
Isoform_148949_3	chr5	-	266	1	Genic_Genomic	ENSMUSG00000054598.14	novel	NA	NA	NA	NA	356	81	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTTCTAAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	66157205	66156939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_66156900_66157200
Isoform_148950_4	chr5	+	193	1	Antisense	novelGene_ENSMUSG00000107304.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACACACCCCATAATAAAT	NA	False	NA	NA	False	NA	NA	NA	66228644	66228837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_66228600_66228800
Isoform_148952_461	chr5	-	178	1	Intergenic	novelGene_8528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATGGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	66366390	66366212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_66366200_66366400
Isoform_148953_29	chr5	-	183	1	Intergenic	novelGene_8529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATAATTCATG	NA	False	NA	NA	False	NA	NA	NA	66388860	66388677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_66388700_66388900
Isoform_148956_42	chr5	-	185	1	Intergenic	novelGene_8530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGCAGCTACTATA	9643	False	NA	-2	True	NA	NA	NA	66407219	66407034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_66407000_66407200
Isoform_148958_3	chr5	-	175	1	Intergenic	novelGene_8531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTTCAGTGGTTGA	4297	False	NA	NA	False	NA	NA	NA	66590751	66590576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_66590600_66590800
Isoform_148959_11	chr5	-	176	1	Intergenic	novelGene_8532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACTTATTAAGAAAA	1075	False	NA	NA	False	NA	NA	NA	66593973	66593797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_66593800_66594000
Isoform_148960_3	chr5	+	3009	2	Antisense	novelGene_ENSMUSG00000029207.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGTACCACAAAGCATCT	NA	False	NA	NA	False	NA	NA	NA	66730333	66733364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_66732385_66732406
Isoform_148961_3	chr5	+	1739	1	Antisense	novelGene_ENSMUSG00000106706.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCCAAAAAAAAAAAAAAAAA	3256	False	NA	NA	False	NA	NA	NA	66749132	66750871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_66749100_66750900
Isoform_148962_9	chr5	-	923	1	NIC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	-1	-77058	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAAGCTGGAG	NA	False	NA	NA	False	AAAACA	-40	NA	66776025	66775102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_66775100_66776000
Isoform_148963_3	chr5	-	1063	1	Genic_Genomic	ENSMUSG00000029207.17	novel	NA	NA	NA	NA	-38	-77058	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAAGCTGGAG	NA	False	NA	NA	False	AAAACA	-40	NA	66776165	66775102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_66775100_66776200
Isoform_148965_6	chr5	-	188	1	Intergenic	novelGene_8533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTAATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	66843236	66843048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_66843000_66843200
Isoform_148967_6	chr5	-	170	1	Intergenic	novelGene_8325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAATAAAGGTAATAG	NA	False	NA	NA	False	NA	NA	NA	3518921	3518751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_3518800_3518900
Isoform_148968_129	chr5	-	176	1	Intergenic	novelGene_8344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12895861	12895685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_12895700_12895900
Isoform_149001_4	chr5	+	2437	1	Intergenic	novelGene_8534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67580069	67582506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_67580100_67582500
Isoform_149002_7	chr5	+	1362	1	Intergenic	novelGene_8535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67581144	67582506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_67581100_67582500
Isoform_149003_11	chr5	-	283	1	Intergenic	novelGene_8536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCCTAGCTCTATTG	NA	False	NA	NA	False	AATAAA	-12	NA	67591838	67591555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_67591600_67591800
Isoform_149004_20	chr5	-	173	1	Intergenic	novelGene_8537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAATTTATTAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	67591839	67591666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_67591700_67591800
Isoform_149005_4	chr5	+	213	1	Intergenic	novelGene_8538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	1439	False	NA	NA	False	NA	NA	NA	67614652	67614865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_67614700_67614900
Isoform_149006_5	chr5	+	2772	1	NIC	ENSMUSG00000107385.4	novel	2764	5	NA	NA	1	-4156	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	8033	False	NA	NA	False	NA	NA	NA	67621246	67624018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_67621200_67624000
Isoform_149007_4	chr5	-	177	1	Intergenic	novelGene_8539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTCCCTCCA	NA	False	NA	NA	False	NA	NA	NA	67663308	67663131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_67663100_67663300
Isoform_149008_9	chr5	+	627	1	Intergenic	novelGene_8540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67911705	67912332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_67911700_67912300
Isoform_149010_6	chr5	-	165	1	Intergenic	novelGene_8541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	67918884	67918719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_67918700_67918900
Isoform_149011_23	chr5	-	190	1	Intergenic	novelGene_8542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAATTTACC	NA	False	NA	NA	False	NA	NA	NA	68009595	68009405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_68009400_68009600
Isoform_149012_5	chr5	-	166	1	Intergenic	novelGene_8543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTGTATGAGTG	NA	False	NA	NA	False	NA	NA	NA	69018123	69017957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_69018000_69018100
Isoform_149014_10	chr5	+	192	1	Intergenic	novelGene_8345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATTTTC	NA	False	NA	NA	False	NA	NA	NA	12975203	12975395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_12975200_12975400
Isoform_149016_19	chr5	-	218	1	Intergenic	novelGene_8544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTTAAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	72395977	72395759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_72395800_72396000
Isoform_149019_3	chr5	+	179	1	Intergenic	novelGene_8545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGAAAAGATGC	NA	False	NA	NA	False	NA	NA	NA	72942657	72942836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_72942700_72942800
Isoform_14902_713	chr11	-	1785	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	29	8	29	-8	multi-exon	TRUE	canonical	3	481	junction_8	26.3136793744665	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTGTCACTGTCTTCA	NA	False	NA	-8	True	AATAAA	-36	NA	84404319	84313688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
Isoform_149020_7	chr5	+	194	1	Intergenic	novelGene_8546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAAGTTTGTTGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	72964158	72964352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_72964200_72964400
Isoform_149021_12	chr2	-	164	1	Intergenic	novelGene_6115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	31589285	31589121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31589100_31589300
Isoform_149022_6	chr5	+	216	1	Intergenic	novelGene_8548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGGAAAACCATAGGTAT	NA	False	NA	NA	False	ATTAAA	-5	NA	73064333	73064549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_73064300_73064500
Isoform_149023_18	chr5	-	177	1	Intergenic	novelGene_8549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73067187	73067010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_73067000_73067200
Isoform_149028_9	chr5	+	174	1	Intergenic	novelGene_8326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAGAAGGAGAAGA	4528	False	NA	NA	False	NA	NA	NA	3526790	3526964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_3526800_3527000
Isoform_149032_22	chr5	-	181	1	Intergenic	novelGene_8346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGATAGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	14014769	14014588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_14014600_14014800
Isoform_149034_26	chr5	+	200	1	Intergenic	novelGene_8550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAATAGAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	73424378	73424578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_73424400_73424600
Isoform_149036_61	chr5	-	173	1	Intergenic	novelGene_8551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGTGACATCTA	NA	False	NA	-1	True	NA	NA	NA	73478319	73478146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_73478100_73478300
Isoform_149038_10	chr5	-	177	1	Intergenic	novelGene_8552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAACATGGAT	NA	False	NA	NA	False	NA	NA	NA	73487495	73487318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_73487300_73487500
Isoform_149039_4	chr5	-	166	1	Intergenic	novelGene_8553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCCAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	73499165	73498999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_73499000_73499200
Isoform_14904_27	chr11	-	1842	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	-28	8	-28	-8	multi-exon	FALSE	canonical	3	481	junction_8	26.3136793744665	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTGTCACTGTCTTCA	NA	False	NA	-8	True	AATAAA	-36	NA	84404376	84313688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
Isoform_149040_6	chr5	+	177	1	Intergenic	novelGene_8554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAAACTATTAAAA	4343	False	NA	NA	False	NA	NA	NA	73636678	73636855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_73636700_73636900
Isoform_149041_55	chr5	-	230	1	Intergenic	novelGene_8555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTTAAAGGAGACCC	NA	False	NA	NA	False	AATAAA	-17	NA	73637283	73637053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_73637100_73637300
Isoform_149043_4	chr5	+	299	1	Intergenic	novelGene_8556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACCCAAAGTTATTT	NA	False	NA	NA	False	NA	NA	NA	73699352	73699651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_73699400_73699700
Isoform_149045_6	chr5	+	2950	1	Genic_Genomic	ENSMUSG00000106968.2	novel	NA	NA	NA	NA	1	955	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGAATCTGTTTCCTTC	NA	False	NA	NA	False	ACTAAA	-17	NA	74103724	74106674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_74103700_74106700
Isoform_149046_12	chr5	+	1988	1	NIC	ENSMUSG00000106968.2	novel	848	2	NA	NA	3	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAAAAAAAAAGAGT	NA	False	NA	NA	False	AATGAA	-21	NA	74103726	74105714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_74103700_74105700
Isoform_14905_13	chr11	-	1667	12	NIC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	8	-9	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	148.688370106605	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404340	84313689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84401024_84401244_84402308_84402405_84402966_84403156_84404117
Isoform_149050_14	chr5	+	191	1	Intergenic	novelGene_8557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCTTCAAAAGTATATAA	NA	False	NA	NA	False	NA	NA	NA	74240380	74240571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_74240400_74240600
Isoform_149051_3	chr5	-	192	1	Intergenic	novelGene_8558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATGAACTCAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	74246503	74246311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_74246300_74246500
Isoform_149052_19	chr5	+	1219	1	FSM	ENSMUSG00000093355.3	ENSMUST00000175614.3	121	1	-411	-687	-411	687	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	19	True	AATAAA	-21	NA	74253779	74254998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_74253800_74255000
Isoform_149055_4	chr5	+	2342	1	Intergenic	novelGene_8559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAGAAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	74426909	74429251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_74426900_74429300
Isoform_149056_30	chr5	-	185	1	Intergenic	novelGene_8560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGTGTTAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	74505434	74505249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_74505200_74505400
Isoform_149057_4	chr5	+	4365	1	Antisense	novelGene_ENSMUSG00000062110.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGACTATATACTGGAG	NA	False	NA	NA	False	AATAAA	-38	NA	74551969	74556334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_74552000_74556300
Isoform_149058_5	chr5	-	3486	1	Intergenic	novelGene_8561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAAAGACAC	NA	False	NA	NA	False	NA	NA	NA	74745371	74741885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_74741900_74745400
Isoform_14906_13	chr11	-	1948	14	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	30	-10	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	181.946510118712	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTGTCACTGTCTT	NA	False	NA	-10	True	AATAAA	-34	NA	84404318	84313690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_84313846_84326559_84326726_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
Isoform_149063_18	chr5	+	166	1	Intergenic	novelGene_8563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	75298011	75298177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_75298000_75298200
Isoform_149067_3	chr5	-	2175	1	Intergenic	novelGene_8564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75790263	75788088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_75788100_75790300
Isoform_149084_3	chr5	-	159	1	Intergenic	novelGene_8565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	8081	False	NA	NA	False	NA	NA	NA	76265915	76265756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_76265800_76265900
Isoform_14909_10	chr11	-	1828	4	ISM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	791	1	10	-1	3prime_fragment	FALSE	canonical	3	90	junction_1	8.65383665716478	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCCTGGAGTTGATTTG	NA	False	NA	-5	True	AATAAA	-22	NA	84709550	84703887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425
Isoform_149090_249	chr5	-	1193	1	FSM	ENSMUSG00000106831.2	ENSMUST00000201768.2	459	1	-34	-700	-34	700	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	76380951	76379758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_76379800_76381000
Isoform_149091_5	chr5	-	175	1	Intergenic	novelGene_8566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	76551259	76551084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_76551100_76551300
Isoform_149092_10	chr5	-	174	1	Intergenic	novelGene_8567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGACAAGGAAATA	NA	False	NA	NA	False	NA	NA	NA	76553821	76553647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_76553600_76553800
Isoform_149094_1360	chr5	-	208	1	Intergenic	novelGene_8568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1360	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76794784	76794576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_76794600_76794800
Isoform_149098_125	chr5	-	174	1	Intergenic	novelGene_8569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAAAAGACG	NA	False	NA	NA	False	NA	NA	NA	77055399	77055225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77055200_77055400
Isoform_149099_5	chr5	-	172	1	Intergenic	novelGene_8570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTGGAGAGCCT	NA	False	NA	NA	False	NA	NA	NA	77057372	77057200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77057200_77057400
Isoform_14910_417	chr11	-	2415	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	61	1	61	-1	multi-exon	FALSE	canonical	0	0	junction_4	44.51404272811	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCCTGGAGTTGATTTG	NA	False	NA	-5	True	AATAAA	-22	NA	84710280	84703887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
Isoform_149102_4	chr5	+	3482	2	Intergenic	novelGene_8571	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	77088739	77092247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_77088993_77089018
Isoform_149110_8	chr5	-	176	1	Intergenic	novelGene_8572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAAAAAAAGTACAATG	NA	False	NA	NA	False	NA	NA	NA	77124095	77123919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77123900_77124100
Isoform_149111_3	chr5	-	171	1	Intergenic	novelGene_8573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTAAAAAAAAAGGCATA	7321	False	NA	NA	False	NA	NA	NA	77132967	77132796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77132800_77133000
Isoform_149116_9	chr5	+	174	1	Intergenic	novelGene_8574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAAAGAAAGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	77244295	77244469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_77244300_77244500
Isoform_149117_75	chr5	-	237	1	Intergenic	novelGene_8575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGATACAAAATATCACT	NA	False	NA	NA	False	AATACA	-39	NA	77289913	77289676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77289700_77289900
Isoform_14912_16	chr11	-	2510	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	-34	1	-34	-1	multi-exon	FALSE	canonical	0	0	junction_4	44.51404272811	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCCTGGAGTTGATTTG	NA	False	NA	-5	True	AATAAA	-22	NA	84710375	84703887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
Isoform_149120_74	chr5	+	176	1	Intergenic	novelGene_8576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	77372714	77372890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_77372700_77372900
Isoform_149122_13	chr5	-	174	1	Intergenic	novelGene_8577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	77396969	77396795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77396800_77397000
Isoform_149124_4	chr5	-	176	1	Intergenic	novelGene_8578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGCCCATGAGGG	NA	False	NA	NA	False	NA	NA	NA	77411580	77411404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77411400_77411600
Isoform_149125_48	chr7	-	157	1	Intergenic	novelGene_10419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	134303477	134303320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_134303300_134303500
Isoform_149126_6	chr5	-	3379	1	Antisense	novelGene_ENSMUSG00000093061.3_AS_novelGene_ENSMUSG00000029249.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	77423085	77419706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_77419700_77423100
Isoform_14914_7	chr11	-	1372	7	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-14	130	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	15.7585955380971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACCTTCAGAAGTATCT	NA	False	NA	NA	False	ATTAAA	-19	NA	84719834	84711551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716348_84719576
Isoform_14915_52	chr11	-	1436	7	FSM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	-53	-129	-23	129	multi-exon	FALSE	canonical	3	39	junction_6	7.19760762722973	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACCTTCAGAAGTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	84719843	84711552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716404_84719576
Isoform_14918_18	chr11	-	2973	13	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	542	0	6	0	3prime_fragment	FALSE	canonical	3	268	junction_7	78.9034219790245	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84761022	84723186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_149184_114	chr12	-	177	1	Intergenic	novelGene_2452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAGCTGTATAG	NA	False	NA	NA	False	NA	NA	NA	20663730	20663553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_20663600_20663700
Isoform_149187_4	chr16	-	155	1	Intergenic	novelGene_4574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	72047141	72046986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_72047000_72047100
Isoform_149189_9	chr5	-	3083	1	Antisense	novelGene_ENSMUSG00000040274.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAAAAACCCAGAAACAC	NA	False	NA	NA	False	NA	NA	NA	3575319	3572236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_3572200_3575300
Isoform_14919_117	chr11	-	2698	13	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	598	219	62	-219	3prime_fragment	FALSE	canonical	3	268	junction_7	78.9034219790245	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAATGTGGTGTACATGT	NA	False	NA	-4	True	AATAAA	-22	NA	84760966	84723405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_149193_25	chr5	-	191	1	Intergenic	novelGene_8580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGAAACCGCTTACTAA	NA	False	NA	NA	False	NA	NA	NA	77471247	77471056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77471100_77471200
Isoform_149194_94	chr5	-	183	1	Intergenic	novelGene_8581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAAGTGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77477950	77477767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77477800_77478000
Isoform_149196_6	chr5	-	194	1	Intergenic	novelGene_8582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGAAGAGGCCAGCTA	NA	False	NA	NA	False	NA	NA	NA	77493966	77493772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77493800_77494000
Isoform_149197_4	chr5	+	176	1	Intergenic	novelGene_8583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAGATGCTGGT	NA	False	NA	NA	False	NA	NA	NA	77566018	77566194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_77566000_77566200
Isoform_149198_4	chr5	-	175	1	Intergenic	novelGene_8584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	77569801	77569626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77569600_77569800
Isoform_149199_173	chrX	+	172	1	Intergenic	novelGene_12010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72896632	72896804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_72896600_72896800
Isoform_14920_31	chr11	-	2762	13	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	535	218	-1	-218	3prime_fragment	FALSE	canonical	3	268	junction_7	78.9034219790245	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGTGGTGTACATGTT	NA	False	NA	-3	True	AATAAA	-23	NA	84761029	84723404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_149202_3	chr5	-	178	1	Intergenic	novelGene_8587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAAGTGG	NA	False	NA	NA	False	NA	NA	NA	81545393	81545215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_81545200_81545400
Isoform_149206_9	chr5	+	1067	1	FSM	ENSMUSG00000079067.6	ENSMUST00000120716.2	279	1	3	-791	3	791	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCTTGGGAAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	84271174	84272241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_84271200_84272200
Isoform_149208_129	chr12	+	182	1	Intergenic	novelGene_2624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAAAG	3583	False	NA	NA	False	NA	NA	NA	72739460	72739642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_72739500_72739600
Isoform_149210_48	chr5	+	180	1	Intergenic	novelGene_8590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAACC	2725	False	NA	NA	False	NA	NA	NA	86074470	86074650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_86074500_86074600
Isoform_149214_145	chr17	+	176	1	Intergenic	novelGene_4974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	40159794	40159970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_40159800_40160000
Isoform_149215_10	chr5	+	174	1	Intergenic	novelGene_8592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAATAAAGTG	NA	False	NA	NA	False	NA	NA	NA	86298886	86299060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_86298900_86299100
Isoform_149216_20	chr5	+	1787	1	Antisense	novelGene_ENSMUSG00000035898.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	86311692	86313479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_86311700_86313500
Isoform_149219_13	chr5	-	185	1	Intergenic	novelGene_8593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATAGCTATGAAAAG	NA	False	NA	NA	False	NA	NA	NA	86591607	86591422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_86591400_86591600
Isoform_149221_14	chr5	+	1620	1	NIC	ENSMUSG00000035851.15	novel	3222	16	NA	NA	-4	-3897	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTG	NA	False	NA	NA	False	AATAAA	-31	NA	86952087	86953707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_86952100_86953700
Isoform_149223_3	chr5	-	312	1	Intergenic	novelGene_8594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATACACCTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	86959974	86959662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_86959700_86960000
Isoform_149224_4	chr5	-	2434	1	Intergenic	novelGene_8595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTGACTCCTTTCCCA	NA	False	NA	NA	False	NA	NA	NA	86962252	86959818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_86959800_86962300
Isoform_149226_20	chr5	-	2819	1	Intergenic	novelGene_8597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	88313249	88310430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_88310400_88313200
Isoform_14926_25	chr11	-	2811	14	FSM	ENSMUSG00000020530.15	ENSMUST00000108081.9	3034	14	4	219	4	-219	multi-exon	FALSE	canonical	3	67	junction_13	134.623999724325	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAATGTGGTGTACATGT	NA	False	NA	-4	True	AATAAA	-22	NA	84761611	84723405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
Isoform_149265_8	chr5	-	4421	1	Intergenic	novelGene_8601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	88314852	88310431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_88310400_88314900
Isoform_149271_55	chr5	+	177	1	Intergenic	novelGene_8602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATTTGTTA	1689	False	NA	NA	False	NA	NA	NA	88570161	88570338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_88570200_88570300
Isoform_149274_237	chr5	+	1648	1	FSM	ENSMUSG00000070697.5	ENSMUST00000090413.6	1629	1	-25	6	-25	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATTGTGTTTGTAATA	NA	False	NA	14	True	AATAAA	-16	NA	88702295	88703943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_88702300_88703900
Isoform_149285_450	chr5	+	1622	1	FSM	ENSMUSG00000070697.5	ENSMUST00000090413.6	1629	1	1	6	1	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATTGTGTTTGTAATA	NA	False	NA	14	True	AATAAA	-16	NA	88702321	88703943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_88702300_88703900
Isoform_149301_3	chr5	+	179	1	Intergenic	novelGene_8603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAATGTTCT	NA	False	NA	NA	False	NA	NA	NA	88814118	88814297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_88814100_88814300
Isoform_149302_10	chr5	-	169	1	Intergenic	novelGene_8604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAATGAATA	NA	False	NA	NA	False	NA	NA	NA	88834971	88834802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_88834800_88835000
Isoform_149303_3	chr5	+	169	1	Intergenic	novelGene_8605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGATAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	88841004	88841173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_88841000_88841200
Isoform_149304_6	chr5	-	179	1	Intergenic	novelGene_8606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATGAAGAACAGTACGTA	NA	False	NA	NA	False	NA	NA	NA	88846445	88846266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_88846300_88846400
Isoform_149308_8	chr5	-	175	1	Intergenic	novelGene_8607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAGAGCATACAC	NA	False	NA	NA	False	NA	NA	NA	88940313	88940138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_88940100_88940300
Isoform_149311_78	chr5	-	5098	1	Intergenic	novelGene_8609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATCAGAGTAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	89356859	89351761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_89351800_89356900
Isoform_149313_27	chr5	-	5300	1	Intergenic	novelGene_8608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	89357052	89351752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_89351800_89357100
Isoform_149347_7	chr5	+	2824	1	Intergenic	novelGene_8610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAGAATGTAGCCA	NA	False	NA	NA	False	NA	NA	NA	89354130	89356954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_89354100_89357000
Isoform_14935_74	chr11	-	2689	13	FSM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	62	-223	62	-222	multi-exon	FALSE	canonical	3	231	junction_7	87.5523256242929	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGAATGTGGTGTACA	NA	False	NA	-7	True	AATAAA	-19	NA	84760966	84723408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_149353_13	chr5	-	178	1	Intergenic	novelGene_8611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATTAAACATC	NA	False	NA	NA	False	NA	NA	NA	89826093	89825915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_89825900_89826100
Isoform_149355_5	chr5	+	195	1	Intergenic	novelGene_8612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACCTACAGTTGCTAGA	NA	False	NA	NA	False	NA	NA	NA	90351444	90351639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_90351400_90351600
Isoform_149358_29	chr12	-	177	1	Intergenic	novelGene_2753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	6093	False	NA	NA	False	NA	NA	NA	87362932	87362755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_87362800_87362900
Isoform_149360_6	chr5	+	183	1	Intergenic	novelGene_8613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGATTGTTCATAAA	NA	False	NA	NA	False	NA	NA	NA	90558522	90558705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_90558500_90558700
Isoform_149361_3	chr5	-	157	1	Intergenic	novelGene_8614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATACAATAAAGAT	NA	False	NA	NA	False	NA	NA	NA	90721424	90721267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_90721300_90721400
Isoform_149362_8	chr5	+	180	1	Intergenic	novelGene_8615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	92060811	92060991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92060800_92061000
Isoform_149363_7	chr5	-	2981	1	FSM	ENSMUSG00000029397.16	ENSMUST00000200905.2	1046	1	-5	-1930	4	1930	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	1672	False	NA	NA	False	NA	NA	NA	92110590	92107609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92107600_92110600
Isoform_149367_14	chr5	+	171	1	Intergenic	novelGene_8616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	2883	False	NA	NA	False	NA	NA	NA	92140840	92141011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92140800_92141000
Isoform_149369_27	chr5	-	189	1	Intergenic	novelGene_8617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATAGCTTACTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	92180307	92180118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92180100_92180300
Isoform_14937_48	chr11	-	2372	13	FSM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	-11	167	-11	-1	multi-exon	FALSE	canonical	3	231	junction_7	87.5523256242929	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGACTACTGCGCCTTCT	NA	False	NA	NA	False	AATAAA	-33	NA	84761039	84723798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_149386_26	chr5	+	208	1	Intergenic	novelGene_8618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACATGCATGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	92222574	92222782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92222600_92222800
Isoform_149387_49	chr5	+	166	1	Intergenic	novelGene_8619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGTTTATAGC	NA	False	NA	NA	False	NA	NA	NA	92234729	92234895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92234700_92234900
Isoform_149388_7	chr4	-	177	1	Intergenic	novelGene_7512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTTTATC	NA	False	NA	NA	False	NA	NA	NA	41177384	41177207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_41177200_41177400
Isoform_14939_46	chr11	-	2743	13	FSM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	9	-224	9	-221	multi-exon	FALSE	canonical	3	231	junction_7	87.5523256242929	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	-6	True	AATAAA	-20	NA	84761019	84723407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_149390_5	chr5	-	171	1	Intergenic	novelGene_8622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAAAAACTGT	8404	False	NA	NA	False	NA	NA	NA	92255260	92255089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92255100_92255300
Isoform_149392_760	chr5	-	167	1	Intergenic	novelGene_8623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	760	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2249	False	NA	NA	False	NA	NA	NA	92261415	92261248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92261200_92261400
Isoform_149393_38	chr5	+	179	1	Intergenic	novelGene_8624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAATCTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	92267335	92267514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92267300_92267500
Isoform_149394_10	chr5	+	178	1	Intergenic	novelGene_8625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATGTGAGTTCC	NA	False	NA	NA	False	NA	NA	NA	92269175	92269353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92269200_92269400
Isoform_149395_10	chr5	-	208	1	Intergenic	novelGene_8626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCTTGGAGGCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	92282961	92282753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92282800_92283000
Isoform_149401_18	chr5	-	366	1	FSM	ENSMUSG00000084111.5	ENSMUST00000121821.2	636	1	334	-64	334	64	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTAGGTCGTGGATGAT	NA	False	NA	NA	False	AATAAA	-40	NA	92288454	92288088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_92288100_92288500
Isoform_149409_16	chr5	-	259	1	Intergenic	novelGene_8627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGATCCAGCT	7484	False	NA	NA	False	NA	NA	NA	92355820	92355561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92355600_92355800
Isoform_149410_52	chr5	-	177	1	Intergenic	novelGene_8327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATGGTGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	3601073	3600896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_3600900_3601100
Isoform_149411_158	chr9	+	177	1	Intergenic	novelGene_11508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	78242091	78242268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78242100_78242300
Isoform_149413_9	chr5	-	219	1	Intergenic	novelGene_8629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCAAAGTTAGAGACTCA	NA	False	NA	NA	False	NA	NA	NA	92388488	92388269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92388300_92388500
Isoform_149414_3	chr5	+	179	1	Intergenic	novelGene_8630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACCTTAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	92427466	92427645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92427500_92427600
Isoform_149421_453	chr5	-	184	1	Intergenic	novelGene_8631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTTAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92528182	92527998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92528000_92528200
Isoform_149424_5	chr5	+	1327	1	FSM	ENSMUSG00002076272.1	ENSMUST00020183735.1	144	1	-1184	1	-1184	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	4906	False	NA	NA	False	NA	NA	NA	92576459	92577786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_92576500_92577800
Isoform_149425_3	chr5	+	3742	1	FSM	ENSMUSG00002076272.1	ENSMUST00020183735.1	144	1	-1184	-2414	-1184	2414	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACACTTG	4906	False	NA	NA	False	TATAAA	-20	NA	92576459	92580201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_92576500_92580200
Isoform_149426_16	chr5	-	3107	1	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-1	-1078	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	92582951	92579844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_92579800_92583000
Isoform_149434_3	chr5	-	178	1	Intergenic	novelGene_8632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTATATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	92748768	92748590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92748600_92748800
Isoform_149435_7	chr5	+	175	1	Intergenic	novelGene_8633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGTTTAAAAATGGA	5926	False	NA	NA	False	NA	NA	NA	92815330	92815505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92815300_92815500
Isoform_149437_3	chr5	+	655	1	Intergenic	novelGene_8634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAACAAAAAAAAAAAAAAA	4832	False	NA	NA	False	NA	NA	NA	92902985	92903640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92903000_92903600
Isoform_149438_63	chr5	-	175	1	Intergenic	novelGene_8635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTCCAGTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	92905927	92905752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92905800_92905900
Isoform_14944_19	chr11	-	2807	14	FSM	ENSMUSG00000020530.15	ENSMUST00000168434.8	3056	14	27	222	-1	-222	multi-exon	FALSE	canonical	3	67	junction_13	138.817874810357	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGAATGTGGTGTACA	NA	False	NA	-7	True	AATAAA	-19	NA	84761616	84723408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
Isoform_149440_9	chr5	-	173	1	Intergenic	novelGene_8636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	955	False	NA	NA	False	NA	NA	NA	92963823	92963650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92963600_92963800
Isoform_149441_142	chr5	-	178	1	Intergenic	novelGene_8637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	93116832	93116654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_93116700_93116800
Isoform_149442_7	chr5	-	150	1	Intergenic	novelGene_8638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	93138955	93138805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_93138800_93139000
Isoform_149443_19	chr5	-	175	1	Intergenic	novelGene_8639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTTAAAGAGTTCTA	8417	False	NA	NA	False	NA	NA	NA	93142299	93142124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_93142100_93142300
Isoform_149444_15	chr5	-	3963	1	FSM	ENSMUSG00000045314.6	ENSMUST00000061328.6	3900	1	-63	0	-63	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTTTCTCTTGTCTAT	0	True	NA	-4	True	NA	NA	NA	93192944	93188981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_93189000_93192900
Isoform_149445_4	chr5	-	3973	1	FSM	ENSMUSG00000045314.6	ENSMUST00000061328.6	3900	1	-121	48	-121	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTTTTGTTTCATTGT	NA	False	NA	-52	True	AATGAA	-15	NA	93193002	93189029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_93189000_93193000
Isoform_149447_13	chr5	-	180	1	Intergenic	novelGene_8640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	93229129	93228949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_93228900_93229100
Isoform_149448_44	chr5	+	2566	1	FSM	ENSMUSG00000058013.12	ENSMUST00000201377.2	640	1	-1	-1925	0	1925	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	93241295	93243861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_93241300_93243900
Isoform_149477_3	chr5	-	601	1	Antisense	novelGene_ENSMUSG00000058013.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAGAA	NA	False	NA	NA	False	CATAAA	-40	NA	93322138	93321537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_93321500_93322100
Isoform_149489_4	chr5	+	591	1	Intergenic	novelGene_8641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	AATATA	-31	NA	93340213	93340804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_93340200_93340800
Isoform_149490_8	chr5	+	184	1	Intergenic	novelGene_8642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTCCTATTTTTACCA	NA	False	NA	NA	False	CATAAA	-27	NA	93346132	93346316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_93346100_93346300
Isoform_149493_7	chr5	+	219	1	Intergenic	novelGene_8643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCCAATGTCTCTTTTG	4508	False	NA	NA	False	NA	NA	NA	95979342	95979561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_95979300_95979600
Isoform_149494_4273	chr11	-	1253	1	FSM	ENSMUSG00000078965.6	ENSMUST00000180654.2	1002	1	-72	-179	-72	179	mono-exon	FALSE	NA	NA	NA	NA	NA	4273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4389	False	NA	NA	False	AATAAA	-15	NA	20286085	20284832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_20284800_20286100
Isoform_149495_4	chr5	+	1247	1	FSM	ENSMUSG00000096617.4	ENSMUST00000180755.2	1002	1	-71	-174	-71	174	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	96009501	96010748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_96009500_96010700
Isoform_149496_26	chr5	+	1104	1	FSM	ENSMUSG00000096617.4	ENSMUST00000180755.2	1002	1	79	-181	79	181	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	96009651	96010755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_96009700_96010800
Isoform_149501_26	chr5	+	585	1	FSM	ENSMUSG00000096617.4	ENSMUST00000180755.2	1002	1	596	-179	596	179	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	96010168	96010753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_96010200_96010800
Isoform_149507_3	chr5	+	763	1	FSM	ENSMUSG00000107092.2	ENSMUST00000200970.2	1384	1	970	-349	970	349	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACACACACACACAAAAAAG	NA	False	NA	NA	False	AATAAA	-33	NA	96123068	96123831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_96123100_96123800
Isoform_149513_38	chr5	+	1730	1	Intergenic	novelGene_8644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-41	NA	96231514	96233244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_96231500_96233200
Isoform_149514_4	chr5	+	1853	1	Intergenic	novelGene_8645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	AATAGA	-26	NA	96315865	96317718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_96315900_96317700
Isoform_149515_9	chr5	-	2130	2	Antisense	novelGene_ENSMUSG00000029486.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96377333	96375171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_96375674_96375705
Isoform_149516_11	chr5	-	177	1	Intergenic	novelGene_8646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTGAAAAAAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	96394988	96394811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_96394800_96395000
Isoform_149517_3	chr5	-	2625	1	Intergenic	novelGene_8647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTGGGACCAAACTTAAG	NA	False	NA	NA	False	NA	NA	NA	96400543	96397918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_96397900_96400500
Isoform_149518_3	chr5	-	169	1	Intergenic	novelGene_8648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGC	NA	False	NA	NA	False	NA	NA	NA	96688091	96687922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_96687900_96688100
Isoform_149520_15	chr5	+	176	1	Intergenic	novelGene_8650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTTTTTTACAAA	801	False	NA	NA	False	NA	NA	NA	96998522	96998698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_96998500_96998700
Isoform_149526_5	chr5	-	1363	1	NIC	ENSMUSG00000046000.6	novel	3424	2	NA	NA	44	-8775	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAGGGACAAAAAGC	NA	False	NA	NA	False	AATATA	-9	NA	97540194	97538831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_97538800_97540200
Isoform_149527_24	chr5	-	276	1	Intergenic	novelGene_8348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTTTTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	20861722	20861446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_20861400_20861700
Isoform_149529_31	chr5	+	171	1	Intergenic	novelGene_8651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATCTTTAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	97608793	97608964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_97608800_97609000
Isoform_14953_14	chr11	-	3882	12	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	-3	-221	intron_retention	FALSE	canonical	3	268	junction_6	81.9556421042949	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	-6	True	AATAAA	-20	NA	84761031	84723407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_149530_15	chr5	-	176	1	Intergenic	novelGene_8652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAGAACTGA	NA	False	NA	NA	False	NA	NA	NA	97703434	97703258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_97703300_97703400
Isoform_149531_5	chr5	+	180	1	Intergenic	novelGene_8653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAACAAAGAAAGCG	NA	False	NA	NA	False	NA	NA	NA	97953970	97954150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_97954000_97954200
Isoform_149533_7	chr5	+	879	1	Intergenic	novelGene_8654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACAAATGTAATTCTC	NA	False	NA	NA	False	NA	NA	NA	98153939	98154818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_98153900_98154800
Isoform_149535_35	chr5	-	176	1	Intergenic	novelGene_8656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTTAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	98457105	98456929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_98456900_98457100
Isoform_149536_4	chr5	+	183	1	Intergenic	novelGene_8657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAACTTTTAGCTTAATG	5711	False	NA	NA	False	NA	NA	NA	98489757	98489940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_98489800_98489900
Isoform_149537_3	chr9	+	183	1	Intergenic	novelGene_11464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	3031	False	NA	NA	False	NA	NA	NA	72464827	72465010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72464800_72465000
Isoform_149539_55	chr5	-	173	1	Intergenic	novelGene_8658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACTATACATAGAA	NA	False	NA	NA	False	NA	NA	NA	99865530	99865357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_99865400_99865500
Isoform_149540_3	chr5	+	178	1	Intergenic	novelGene_8659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAAACATAG	NA	False	NA	NA	False	NA	NA	NA	99896729	99896907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_99896700_99896900
Isoform_149541_30	chr5	+	156	1	Intergenic	novelGene_8660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	99956945	99957101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_99956900_99957100
Isoform_149542_24	chr5	+	176	1	Intergenic	novelGene_8661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATCTAATAAAAT	4915	False	NA	NA	False	NA	NA	NA	100082821	100082997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100082800_100083000
Isoform_149544_56	chr5	+	204	1	Intergenic	novelGene_8662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGAACTCAGATTCTT	NA	False	NA	NA	False	NA	NA	NA	100094946	100095150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100094900_100095200
Isoform_149547_3	chr5	+	166	1	Intergenic	novelGene_8663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATAATCTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	100161589	100161755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100161600_100161800
Isoform_149548_10	chr11	-	175	1	Intergenic	novelGene_2126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	101035318	101035143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_101035100_101035300
Isoform_149557_105	chr5	+	173	1	Intergenic	novelGene_8664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	100224962	100225135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100225000_100225100
Isoform_149558_27	chr5	-	178	1	Intergenic	novelGene_8665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100431959	100431781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_100431800_100432000
Isoform_149559_3	chr5	-	874	1	Genic_Genomic	ENSMUSG00000085915.2	novel	NA	NA	NA	NA	-175	-133981	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100503153	100502279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_100502300_100503200
Isoform_149560_6	chr5	+	5492	1	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-19	NA	100509757	100515249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_100509800_100515200
Isoform_149565_5	chr5	+	178	1	Intergenic	novelGene_8666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAAAAAATTGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	100620638	100620816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100620600_100620800
Isoform_149567_3	chr5	+	177	1	Intergenic	novelGene_8667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	100640750	100640927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100640800_100640900
Isoform_149568_4	chr5	-	150	1	Intergenic	novelGene_8668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	100682277	100682127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_100682100_100682300
Isoform_149569_25	chr5	+	180	1	Intergenic	novelGene_8669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATTCACATACAT	NA	False	NA	NA	False	NA	NA	NA	100702668	100702848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100702700_100702800
Isoform_149570_24	chr5	+	199	1	Intergenic	novelGene_8670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAACAT	NA	False	NA	NA	False	NA	NA	NA	100733390	100733589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100733400_100733600
Isoform_149571_45	chr5	-	163	1	Intergenic	novelGene_8671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100938633	100938470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_100938500_100938600
Isoform_149572_11	chr5	+	179	1	FSM	ENSMUSG00000104761.2	ENSMUST00000197084.2	2297	1	2096	22	2096	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGGATTGTG	NA	False	NA	NA	False	NA	NA	NA	100948710	100948889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_100948700_100948900
Isoform_149573_5	chr5	-	2589	1	FSM	ENSMUSG00000105755.2	ENSMUST00000198852.2	424	1	-200	-1965	-200	1965	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	TTTAAA	-38	NA	100968819	100966230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_100966200_100968800
Isoform_149574_40	chr5	+	182	1	Intergenic	novelGene_8672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100971912	100972094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100971900_100972100
Isoform_149575_9	chr5	+	177	1	Intergenic	novelGene_8673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100985422	100985599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_100985400_100985600
Isoform_149576_47	chr5	-	176	1	Intergenic	novelGene_8674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTTAAAGTAAACA	NA	False	NA	NA	False	NA	NA	NA	100997245	100997069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_100997100_100997200
Isoform_149577_3	chr5	+	173	1	Intergenic	novelGene_8675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGAATTGTAATG	NA	False	NA	NA	False	NA	NA	NA	101023897	101024070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_101023900_101024100
Isoform_149580_4	chr5	-	190	1	Intergenic	novelGene_8676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATGAAAAATATAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	101653092	101652902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_101652900_101653100
Isoform_149581_4	chr5	+	173	1	Intergenic	novelGene_8677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	101779895	101780068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_101779900_101780100
Isoform_149583_3	chr5	-	2949	1	Antisense	novelGene_ENSMUSG00000029330.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGATAGGCAGGCATGAG	NA	False	NA	NA	False	ATTAAA	-9	NA	101954621	101951672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_101951700_101954600
Isoform_149585_25	chr6	-	178	1	Intergenic	novelGene_9639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7217	False	NA	NA	False	NA	NA	NA	125042633	125042455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_125042500_125042600
Isoform_149587_14	chr5	-	179	1	Intergenic	novelGene_8349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	21039568	21039389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_21039400_21039600
Isoform_149588_4	chr5	-	207	1	Intergenic	novelGene_8678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTATACACGTATAGGC	NA	False	NA	NA	False	NA	NA	NA	102192558	102192351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_102192400_102192600
Isoform_149589_102	chr11	+	176	1	ISM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	21640	0	7092	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116766285	116766461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_116766300_116766500
Isoform_149590_3	chr5	-	176	1	Intergenic	novelGene_8679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAACAATGTAA	NA	False	NA	NA	False	NA	NA	NA	102231607	102231431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_102231400_102231600
Isoform_149591_21	chr5	-	163	1	Intergenic	novelGene_8680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAAATTACTGA	NA	False	NA	NA	False	NA	NA	NA	102233895	102233732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_102233700_102233900
Isoform_149593_150	chr11	+	176	1	Intergenic	novelGene_2026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAAGTTTGTCTCTG	4626	False	NA	NA	False	NA	NA	NA	95768250	95768426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95768200_95768400
Isoform_149594_9	chr5	-	161	1	Intergenic	novelGene_8351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	2686	False	NA	NA	False	NA	NA	NA	21053326	21053165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_21053200_21053300
Isoform_149595_6	chr5	-	175	1	Intergenic	novelGene_8328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	3621080	3620905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_3620900_3621100
Isoform_149597_4	chr5	+	175	1	Intergenic	novelGene_8682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	103529873	103530048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_103529900_103530000
Isoform_149598_18	chr5	+	194	1	Intergenic	novelGene_8683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103654735	103654929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_103654700_103654900
Isoform_149600_16	chr5	+	159	1	Intergenic	novelGene_8684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCTTTATTTAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103733925	103734084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_103733900_103734100
Isoform_149601_4	chr5	+	163	1	Intergenic	novelGene_8352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCCGCTGACTCCTAAG	NA	False	NA	NA	False	NA	NA	NA	21084884	21085047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_21084900_21085000
Isoform_149602_3	chr5	+	267	1	Intergenic	novelGene_8685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAAATAAATAAATCA	NA	False	NA	NA	False	NA	NA	NA	103752189	103752456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_103752200_103752500
Isoform_149603_4	chr5	-	160	1	Intergenic	novelGene_8686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	103812563	103812403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_103812400_103812600
Isoform_149604_27	chr5	+	158	1	Intergenic	novelGene_8687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	103836020	103836178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_103836000_103836200
Isoform_149606_4	chr5	-	6305	3	Antisense	novelGene_ENSMUSG00000029313.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTATTTTACGTGTC	NA	False	NA	NA	False	AATAAA	-3	NA	103861142	103854773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_103855764_103855803_103856224_103856247
Isoform_149609_16	chr5	+	174	1	Intergenic	novelGene_8688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	103881238	103881412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_103881200_103881400
Isoform_149611_3	chr5	+	2225	1	FSM	ENSMUSG00000045435.10	ENSMUST00000196723.2	2178	1	-42	-5	-42	5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAGAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	21087462	21089687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_21087500_21089700
Isoform_149643_59	chr5	+	177	1	Intergenic	novelGene_8689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAATATGAGT	NA	False	NA	NA	False	NA	NA	NA	104158913	104159090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_104158900_104159100
Isoform_149649_121	chr5	-	181	1	Antisense	novelGene_ENSMUSG00000097877.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACATTTTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	104267184	104267003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_104267000_104267200
Isoform_149650_12	chr5	-	176	1	Intergenic	novelGene_8690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAAAAAAAAACCAATGG	NA	False	NA	NA	False	NA	NA	NA	104294499	104294323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_104294300_104294500
Isoform_149659_10	chr5	-	2007	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	104608210	104606203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_104606200_104608200
Isoform_149661_14	chr5	-	1913	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTGGTAATATTTTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	104608242	104606329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_104606300_104608200
Isoform_149663_14	chr5	+	179	1	Intergenic	novelGene_8691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTGC	NA	False	NA	NA	False	NA	NA	NA	104688127	104688306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_104688100_104688300
Isoform_149664_640	chr5	+	179	1	Intergenic	novelGene_8692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	640	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATTTAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	104725133	104725312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_104725100_104725300
Isoform_149670_4	chr5	+	2041	1	Intergenic	novelGene_8693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGTGTGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104730444	104732485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_104730400_104732500
Isoform_149671_25	chr5	+	181	1	Intergenic	novelGene_8353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21111449	21111630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_21111400_21111600
Isoform_149673_179	chr5	-	177	1	Intergenic	novelGene_8694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	104809001	104808824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_104808800_104809000
Isoform_149674_90	chr5	-	179	1	Intergenic	novelGene_8695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATTAACTCAAACAA	NA	False	NA	NA	False	NA	NA	NA	104826633	104826454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_104826500_104826600
Isoform_149675_3	chr5	+	2029	1	Intergenic	novelGene_8696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGTTCGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104898324	104900353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_104898300_104900400
Isoform_149676_15	chr5	+	171	1	Intergenic	novelGene_8697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACAAATGGCCGGG	NA	False	NA	NA	False	NA	NA	NA	104986613	104986784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_104986600_104986800
Isoform_149677_13	chr5	+	4133	1	Intergenic	novelGene_8698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	105001314	105005447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_105001300_105005400
Isoform_149678_3	chr5	-	1003	1	Intergenic	novelGene_8699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGGAAAAAAAAAAAAAAA	1623	False	NA	NA	False	NA	NA	NA	105082161	105081158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_105081200_105082200
Isoform_149681_3	chr5	-	175	1	Intergenic	novelGene_8701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTTTTTACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105599417	105599242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_105599200_105599400
Isoform_149683_10	chr5	-	195	1	Intergenic	novelGene_8354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAAGTAATCAGTCATTG	NA	False	NA	NA	False	NA	NA	NA	21142750	21142555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_21142600_21142800
Isoform_149684_29	chr5	+	160	1	Intergenic	novelGene_8702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	105833232	105833392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_105833200_105833400
Isoform_149686_24	chr5	+	179	1	Intergenic	novelGene_8703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105900239	105900418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_105900200_105900400
Isoform_149687_4	chr5	-	199	1	Intergenic	novelGene_8704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCAGGGGGCGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	105913720	105913521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_105913500_105913700
Isoform_149704_6	chr5	+	177	1	Intergenic	novelGene_8355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	21150958	21151135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_21151000_21151100
Isoform_149712_111	chr5	-	1279	1	FSM	ENSMUSG00000094708.2	ENSMUST00000180167.2	1002	1	-71	-206	-71	206	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCACTGTAGAGCTGGA	NA	False	NA	NA	False	AATAAA	-40	NA	106011639	106010360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_106010400_106011600
Isoform_149715_53	chr17	+	197	1	Intergenic	novelGene_4849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATGTAAACGAGGAAAA	354	False	NA	NA	False	NA	NA	NA	29492526	29492723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29492500_29492700
Isoform_149717_5	chr5	+	169	1	Intergenic	novelGene_8706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTGCACAAAAGC	NA	False	NA	NA	False	NA	NA	NA	106576758	106576927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_106576800_106576900
Isoform_149719_12	chr5	-	865	1	NIC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	26	-30790	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	21156794	21155929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_21155900_21156800
Isoform_149721_7	chr5	-	1037	1	Genic_Genomic	ENSMUSG00000049606.17_ENSMUSG00000098302.2	novel	NA	NA	NA	NA	-3	-437	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106844699	106843662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_106843700_106844700
Isoform_149723_4	chr5	+	174	1	Intergenic	novelGene_8707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	106846739	106846913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_106846700_106846900
Isoform_149724_3	chr5	+	177	1	Intergenic	novelGene_8708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	106871665	106871842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_106871700_106871800
Isoform_149725_46	chr7	+	178	1	Intergenic	novelGene_9908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27981723	27981901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27981700_27981900
Isoform_149728_12	chr5	+	179	1	Intergenic	novelGene_8710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATATG	NA	False	NA	NA	False	NA	NA	NA	107043600	107043779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_107043600_107043800
Isoform_149732_23	chr5	+	174	1	Intergenic	novelGene_8711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTCC	NA	False	NA	NA	False	NA	NA	NA	107132895	107133069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_107132900_107133100
Isoform_149733_43	chr11	+	176	1	Intergenic	novelGene_2157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAAAAAAAATTGAAAATA	NA	False	NA	NA	False	NA	NA	NA	102484215	102484391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102484200_102484400
Isoform_149735_27	chr5	+	173	1	Intergenic	novelGene_8713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAAAAGGAC	NA	False	NA	2	True	NA	NA	NA	107285949	107286122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_107285900_107286100
Isoform_149736_5	chr1	-	179	1	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	55155034	55154855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_55154900_55155000
Isoform_149739_7	chr5	-	172	1	Intergenic	novelGene_8714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGATGCAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	107501414	107501242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_107501200_107501400
Isoform_149745_51	chr5	-	176	1	Intergenic	novelGene_8715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCATCTT	8826	False	NA	NA	False	NA	NA	NA	107967395	107967219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_107967200_107967400
Isoform_149746_3	chr5	+	175	1	Intergenic	novelGene_8356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAATGTGG	NA	False	NA	NA	False	NA	NA	NA	21181536	21181711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_21181500_21181700
Isoform_149748_7	chr5	+	177	1	Intergenic	novelGene_8716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCACTGTGAAG	8654	False	NA	NA	False	NA	NA	NA	108009866	108010043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108009900_108010000
Isoform_149749_10	chr5	+	328	1	Intergenic	novelGene_8717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCGCGCAAAGATTAAAAA	NA	False	NA	NA	False	AATAAA	-42	NA	108015743	108016071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108015700_108016100
Isoform_149751_151	chr5	+	191	1	Intergenic	novelGene_8718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	108041900	108042091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108041900_108042100
Isoform_149752_18	chr5	+	185	1	Intergenic	novelGene_8357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTGT	3191	False	NA	NA	False	NA	NA	NA	21189573	21189758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_21189600_21189800
Isoform_149754_5	chr5	-	1372	1	Antisense	novelGene_ENSMUSG00000058558.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-11	NA	108054589	108053217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_108053200_108054600
Isoform_149757_5	chr5	+	181	1	Intergenic	novelGene_8719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTGTCTTGGTCATG	752	False	NA	NA	False	NA	NA	NA	108067132	108067313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108067100_108067300
Isoform_149758_16	chr5	+	170	1	Intergenic	novelGene_8720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGCTCACATAG	8158	False	NA	NA	False	NA	NA	NA	108096103	108096273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108096100_108096300
Isoform_149760_11	chr5	+	357	1	Intergenic	novelGene_8721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACCTCTTCCAATGTG	NA	False	NA	NA	False	AAGAAA	-23	NA	108117913	108118270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108117900_108118300
Isoform_149761_4	chr5	+	254	1	Intergenic	novelGene_8722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGGCTGCTCTTCCAAA	NA	False	NA	NA	False	NA	NA	NA	108123317	108123571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108123300_108123600
Isoform_149763_14	chr5	+	178	1	Intergenic	novelGene_8723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATTCCAGAAGATTT	NA	False	NA	NA	False	NA	NA	NA	108189698	108189876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108189700_108189900
Isoform_149764_7	chr5	-	176	1	Intergenic	novelGene_8724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	108195479	108195303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_108195300_108195500
Isoform_149766_213	chr5	+	186	1	Intergenic	novelGene_8725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTAAATTGTTTTC	NA	False	NA	2	True	NA	NA	NA	108199107	108199293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108199100_108199300
Isoform_149769_233	chr5	-	182	1	Intergenic	novelGene_8726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGGTAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	108207579	108207397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_108207400_108207600
Isoform_149785_17	chr11	+	176	1	Intergenic	novelGene_1666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69284852	69285028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69284900_69285000
Isoform_149788_18	chr5	+	172	1	Intergenic	novelGene_8727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAAAAAGTGA	6931	False	NA	NA	False	NA	NA	NA	108276601	108276773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108276600_108276800
Isoform_149790_39	chr5	-	185	1	Intergenic	novelGene_8728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAACTATTATTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	108310375	108310190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_108310200_108310400
Isoform_149791_4	chr5	-	208	1	Intergenic	novelGene_8729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAAGTATATT	NA	False	NA	NA	False	NA	NA	NA	108337404	108337196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_108337200_108337400
Isoform_149792_3	chr5	-	185	1	Intergenic	novelGene_8730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAAATATTC	4898	False	NA	NA	False	NA	NA	NA	108364520	108364335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_108364300_108364500
Isoform_149793_8	chr5	+	176	1	Intergenic	novelGene_8731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTTAAAAAAAAAAGAA	3786	False	NA	NA	False	NA	NA	NA	108371539	108371715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108371500_108371700
Isoform_149794_166	chr5	+	197	1	Intergenic	novelGene_8358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGAGTTTGCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	21232792	21232989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_21232800_21233000
Isoform_149796_19	chr5	-	158	1	Intergenic	novelGene_8732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	108373748	108373590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_108373600_108373700
Isoform_149797_39	chr7	+	177	1	Intergenic	novelGene_9910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTATGTAT	NA	False	NA	NA	False	NA	NA	NA	28013190	28013367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28013200_28013400
Isoform_149800_3	chr5	-	1064	1	FSM	ENSMUSG00000106103.2	ENSMUST00000199082.2	1380	1	16	300	16	-300	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	108460599	108459535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_108459500_108460600
Isoform_149801_2541	chr5	+	157	1	Intergenic	novelGene_8734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2541	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	108479582	108479739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108479600_108479700
Isoform_149803_139	chr5	+	179	1	Intergenic	novelGene_8735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTGCTGC	NA	False	NA	NA	False	NA	NA	NA	108501837	108502016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108501800_108502000
Isoform_149805_7	chr5	+	155	1	Intergenic	novelGene_8736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATCTTTTTAAGAAG	NA	False	NA	NA	False	NA	NA	NA	108561404	108561559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108561400_108561600
Isoform_149806_3	chr5	+	2158	1	NIC	ENSMUSG00000033623.14	novel	2169	8	NA	NA	-1732	474	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2314	False	NA	NA	False	AATAAA	-30	NA	108632353	108634511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_108632400_108634500
Isoform_149815_19	chr5	+	2116	1	Antisense	novelGene_ENSMUSG00000062234.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108740171	108742287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_108740200_108742300
Isoform_149817_36	chr5	+	172	1	Antisense	novelGene_ENSMUSG00000067010.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAACATAGAGC	NA	False	NA	NA	False	NA	NA	NA	109140495	109140667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_109140500_109140700
Isoform_149819_3	chr5	-	867	1	NIC	ENSMUSG00000072762.10	novel	599	3	NA	NA	-117	-12017	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTTAAAAAAACAAAAGA	7829	False	NA	NA	False	NA	NA	NA	109899580	109898713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_109898700_109899600
Isoform_149826_5	chr5	-	175	1	Intergenic	novelGene_8743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	110064624	110064449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110064400_110064600
Isoform_14983_11	chr11	-	1634	7	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	1	551	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	227.551215236385	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGTTTTGTTTGTAT	NA	False	NA	0	True	ATTAAA	-16	NA	84761614	84742656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
Isoform_149830_6	chr5	+	175	1	Intergenic	novelGene_8744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAACATTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	110192277	110192452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110192300_110192500
Isoform_149831_19	chr5	+	178	1	Intergenic	novelGene_8745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	110193490	110193668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110193500_110193700
Isoform_149832_3	chr5	-	255	1	Intergenic	novelGene_8746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAAGCCTGCTTTTATA	NA	False	NA	NA	False	NA	NA	NA	110200944	110200689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110200700_110200900
Isoform_149834_6	chr4	-	156	1	Intergenic	novelGene_7813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATATAAA	NA	False	NA	NA	False	NA	NA	NA	119014874	119014718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_119014700_119014900
Isoform_149835_5	chr5	-	895	1	Intergenic	novelGene_8747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	110234213	110233318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110233300_110234200
Isoform_149836_6	chr5	+	180	1	Intergenic	novelGene_8748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	8624	False	NA	NA	False	NA	NA	NA	110239776	110239956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110239800_110240000
Isoform_149837_3	chr5	-	1028	1	Genic_Genomic	ENSMUSG00000109771.2	novel	NA	NA	NA	NA	-11	-14130	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	110242297	110241269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_110241300_110242300
Isoform_149840_5	chr5	-	247	1	Intergenic	novelGene_8749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTCAAATAGA	4031	False	NA	NA	False	AATATA	-33	NA	110265824	110265577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110265600_110265800
Isoform_149842_3	chr5	+	162	1	Intergenic	novelGene_8359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	21827632	21827794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_21827600_21827800
Isoform_149843_6	chr5	-	157	1	Intergenic	novelGene_8751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110312995	110312838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110312800_110313000
Isoform_149844_5	chr5	+	182	1	ISM	ENSMUSG00000029502.15	ENSMUST00000136900.2	3786	3	6689	2773	6649	-839	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	650	False	NA	NA	False	NA	NA	NA	110331411	110331593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_110331400_110331600
Isoform_149845_23	chr5	-	176	1	Intergenic	novelGene_8752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTTACCTTA	NA	False	NA	NA	False	NA	NA	NA	110365320	110365144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110365100_110365300
Isoform_149853_34	chr5	-	781	1	NIC	ENSMUSG00000029500.17	novel	2098	6	NA	NA	-10	-3502	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110417730	110416949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_110416900_110417700
Isoform_149854_18	chr5	-	164	1	Intergenic	novelGene_8753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	110429982	110429818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110429800_110430000
Isoform_149855_3	chr5	-	199	1	Intergenic	novelGene_8754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACGTACAAGTCAAAGCA	9767	False	NA	NA	False	NA	NA	NA	110438759	110438560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110438600_110438800
Isoform_149870_14	chr5	-	3369	2	Intergenic	novelGene_8755	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110585448	110582057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110584013_110584034
Isoform_149871_8	chr5	-	4708	2	Intergenic	novelGene_8756	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	110617079	110612345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110614826_110614851
Isoform_149873_5	chr5	+	168	1	Intergenic	novelGene_8759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAAAACATGTG	NA	False	NA	NA	False	NA	NA	NA	110759988	110760156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110760000_110760200
Isoform_149874_4	chr5	-	1414	1	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	104738	3	2399	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTCTGTCTTAATA	NA	False	NA	-3	True	AATAAA	-16	NA	110813655	110812241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_110812200_110813700
Isoform_149875_12	chr5	+	176	1	Intergenic	novelGene_8760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGTAATTTGTTTT	3914	False	NA	NA	False	NA	NA	NA	110883847	110884023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110883800_110884000
Isoform_149876_15	chr5	+	160	1	Intergenic	novelGene_8761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	2795	False	NA	NA	False	NA	NA	NA	110898082	110898242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110898100_110898200
Isoform_149879_4	chr5	+	690	1	Intergenic	novelGene_8762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGACCCAGAAGGAGGTGA	NA	False	NA	NA	False	NA	NA	NA	110920518	110921208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_110920500_110921200
Isoform_149895_5	chr5	+	2032	1	Genic_Genomic	ENSMUSG00000033209.18	novel	NA	NA	NA	NA	-5	-32487	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	111027663	111029695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_111027700_111029700
Isoform_149896_11	chr5	-	174	1	Intergenic	novelGene_8763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGGTAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	111258441	111258267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_111258300_111258400
Isoform_149897_26	chr5	+	675	1	Genic_Genomic	ENSMUSG00000050017.12	novel	NA	NA	NA	NA	-5	-51681	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACGTTAA	NA	False	NA	NA	False	NA	NA	NA	111478623	111479298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_111478600_111479300
Isoform_149902_6	chr5	-	232	1	Antisense	novelGene_ENSMUSG00000070576.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	111602983	111602751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_111602800_111603000
Isoform_149904_18	chr5	+	173	1	Intergenic	novelGene_8764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	112303208	112303381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_112303200_112303400
Isoform_149908_14	chr5	-	3812	1	Genic_Genomic	ENSMUSG00000029346.13	novel	NA	NA	NA	NA	-4	486	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCTCAAAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112490910	112487098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_112487100_112490900
Isoform_149910_5	chr5	-	170	1	Intergenic	novelGene_8765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTTTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112817090	112816920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_112816900_112817100
Isoform_149915_7	chr5	+	175	1	Intergenic	novelGene_8766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAAAAAAAAATCTCAG	NA	False	NA	NA	False	NA	NA	NA	113288801	113288976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_113288800_113289000
Isoform_149916_3	chr5	-	3916	1	FSM	ENSMUSG00000104705.2	ENSMUST00000199950.2	1200	1	-2713	-3	-2713	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTTTTCAGCCTATC	NA	False	NA	NA	False	NA	NA	NA	113472232	113468316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_113468300_113472200
Isoform_149919_3	chr5	-	386	1	Intergenic	novelGene_8767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACAAAATCACAA	2018	False	NA	NA	False	NA	NA	NA	113722761	113722375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_113722400_113722800
Isoform_14992_90	chr11	-	974	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	19	5	2	-5	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTATTGTTCCCTTAG	NA	False	NA	64	True	AATAAA	-11	NA	84807173	84801780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
Isoform_149920_41	chr5	+	154	1	Intergenic	novelGene_8770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAAGGCTCAT	1884	False	NA	NA	False	NA	NA	NA	113737900	113738054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_113737900_113738100
Isoform_149925_10	chr5	+	2791	1	NIC	ENSMUSG00000025825.13	novel	957	5	NA	NA	-7	-1453	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3643	False	NA	NA	False	GATAAA	-45	NA	113910856	113913647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_113910900_113913600
Isoform_149927_3	chr5	-	1901	1	Intergenic	novelGene_8360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGTGGGGGGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	21997473	21995572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_21995600_21997500
Isoform_149928_206	chr9	+	173	1	Intergenic	novelGene_11689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9063	False	NA	NA	False	NA	NA	NA	109905502	109905675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_109905500_109905700
Isoform_14993_185	chr11	-	903	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	20	75	3	-75	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGGTGTGGTTCTCTT	NA	False	NA	-6	True	ATTAAA	-15	NA	84807172	84801850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
Isoform_149942_52	chr5	-	190	1	Intergenic	novelGene_8773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	114025179	114024989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_114025000_114025200
Isoform_149944_9	chr5	-	211	1	Intergenic	novelGene_8774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGAACTTGACTCCAC	NA	False	NA	NA	False	NA	NA	NA	114052045	114051834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_114051800_114052000
Isoform_149966_5	chr13	-	247	1	Intergenic	novelGene_3227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90890026	90889779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_90889800_90890000
Isoform_149967_22	chr5	+	178	1	Antisense	novelGene_ENSMUSG00000042078.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAGAACTAACA	NA	False	NA	NA	False	NA	NA	NA	114203146	114203324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_114203100_114203300
Isoform_149970_3	chr5	-	2342	1	NIC	ENSMUSG00000042078.15	novel	3379	16	NA	NA	150	-34342	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114229278	114226936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_114226900_114229300
Isoform_149979_20	chr5	-	197	1	Intergenic	novelGene_8361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGCCATCATATTAACT	NA	False	NA	NA	False	NA	NA	NA	22241244	22241047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_22241000_22241200
Isoform_14998_3	chr11	-	6975	34	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	1	-49	combination_of_known_splicesites	FALSE	canonical	3	6	junction_18	13.9856281998075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGGTTTTTCCTTGTA	7556	False	NA	-9	True	ATTAAA	-14	NA	85030793	84875316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927305_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
Isoform_149980_53	chr5	-	207	1	Intergenic	novelGene_8775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAAACAAACGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	114297616	114297409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_114297400_114297600
Isoform_149981_8	chr5	+	179	1	Intergenic	novelGene_8776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	6455	False	NA	NA	False	NA	NA	NA	114457316	114457495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_114457300_114457500
Isoform_149989_3	chr5	-	1070	1	Intergenic	novelGene_8777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114622592	114621522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_114621500_114622600
Isoform_149990_6	chr5	-	169	1	Intergenic	novelGene_8778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCCAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	114625656	114625487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_114625500_114625700
Isoform_149993_46	chr5	-	201	1	Intergenic	novelGene_8467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAATCTCTGGGTTAGT	NA	False	NA	NA	False	NA	NA	NA	35251810	35251609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_35251600_35251800
Isoform_149994_73	chr5	+	177	1	Intergenic	novelGene_8780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	114754022	114754199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_114754000_114754200
Isoform_149995_4	chr5	+	180	1	Intergenic	novelGene_8781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	114799936	114800116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_114799900_114800100
Isoform_149996_3	chr5	+	298	1	Antisense	novelGene_ENSMUSG00000011884.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCGCCTAGTCAGTT	NA	False	NA	NA	False	AATACA	-17	NA	114807470	114807768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_114807500_114807800
Isoform_149998_14	chr5	+	174	1	Intergenic	novelGene_8782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGATTAAATAATA	NA	False	NA	NA	False	NA	NA	NA	114839993	114840167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_114840000_114840200
Isoform_149999_197	chr5	-	186	1	Intergenic	novelGene_8783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTGGTAGTGGGT	8112	False	NA	-30	True	NA	NA	NA	114845469	114845283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_114845300_114845500
Isoform_150002_61	chr5	+	177	1	Intergenic	novelGene_8784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATGAAAAAAAAAT	3467	False	NA	NA	False	NA	NA	NA	114915358	114915535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_114915400_114915500
Isoform_150006_5	chr5	+	203	1	Intergenic	novelGene_8785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTTAAGAACTTATTTT	6104	False	NA	NA	False	NA	NA	NA	114948323	114948526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_114948300_114948500
Isoform_150009_108	chr6	+	180	1	Intergenic	novelGene_9502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAAAAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	90395402	90395582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_90395400_90395600
Isoform_15001_35	chr11	-	6971	34	FSM	ENSMUSG00000000804.15	ENSMUST00000108075.9	7053	34	86	-4	16	4	multi-exon	FALSE	canonical	3	28	junction_26	11.8228429036788	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTGTGATCCTGTTT	7571	False	NA	-10	True	AGTAAA	-26	NA	85030778	84875263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
Isoform_150010_137	chr5	+	189	1	Intergenic	novelGene_8786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAGATCTGACATCAC	NA	False	NA	15	True	NA	NA	NA	114967467	114967656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_114967500_114967700
Isoform_150011_4	chr5	+	173	1	Intergenic	novelGene_8787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTTTATTTTTTTT	4239	False	NA	NA	False	NA	NA	NA	114974116	114974289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_114974100_114974300
Isoform_150012_24	chr5	-	2362	1	Intergenic	novelGene_8788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGGACTGGTGGTCGC	NA	False	NA	NA	False	NA	NA	NA	115020259	115017897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115017900_115020300
Isoform_150015_39	chr5	-	186	1	Intergenic	novelGene_8789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	115059784	115059598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115059600_115059800
Isoform_150018_3	chr5	-	200	1	Intergenic	novelGene_8790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAGAAAAGAAA	10019	False	NA	NA	False	NA	NA	NA	115124918	115124718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115124700_115124900
Isoform_150019_3	chr5	-	170	1	Intergenic	novelGene_8791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTGTATTGTAA	616	False	NA	NA	False	NA	NA	NA	115157761	115157591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115157600_115157800
Isoform_15002_4	chr11	-	2861	2	FSM	ENSMUSG00000000804.15	ENSMUST00000174809.2	566	2	-33	-2262	6	-1194	multi-exon	FALSE	canonical	3	44	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	7561	False	NA	NA	False	NA	NA	NA	85030788	84992243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_84994853_85030536
Isoform_150020_3	chr5	-	2041	2	Antisense	novelGene_ENSMUSG00000029550.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	115164159	115162089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_115163529_115163557
Isoform_150022_3139	chr5	-	621	1	FSM	ENSMUSG00000081855.5	ENSMUST00000121001.2	555	1	-35	-31	-35	31	mono-exon	FALSE	NA	NA	NA	NA	NA	3139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGTCAAAACAAAACAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	22818215	22817594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_22817600_22818200
Isoform_150029_10	chr5	-	2268	1	FSM	ENSMUSG00000086167.4	ENSMUST00000148801.2	372	1	-1892	-4	-1892	4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAACAAAAA	514	False	NA	NA	False	NA	NA	NA	115193791	115191523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115191500_115193800
Isoform_150030_3	chr5	-	172	1	Intergenic	novelGene_8792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAACCAAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	115196248	115196076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115196100_115196200
Isoform_150032_18	chr5	+	239	1	Intergenic	novelGene_8793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTCTTTAATGTAG	NA	False	NA	NA	False	NA	NA	NA	115220969	115221208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115221000_115221200
Isoform_150034_8	chr5	+	170	1	Intergenic	novelGene_8362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACAGAATACTCTTGG	NA	False	NA	NA	False	NA	NA	NA	22819762	22819932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_22819800_22819900
Isoform_150035_5	chr5	-	169	1	Antisense	novelGene_ENSMUSG00000029550.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGACATAAAATAC	NA	False	NA	NA	False	NA	NA	NA	115233024	115232855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_115232900_115233000
Isoform_150037_4545	chr5	-	359	1	FSM	ENSMUSG00000072692.8	ENSMUST00000124641.2	294	1	-27	-38	-27	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4545	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTAATCC	NA	False	NA	-14	True	AATAAA	-14	NA	115241607	115241248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115241200_115241600
Isoform_150040_42	chr5	+	178	1	Intergenic	novelGene_8794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	6290	False	NA	NA	False	NA	NA	NA	115244335	115244513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115244300_115244500
Isoform_150044_17	chr5	-	2219	1	FSM	ENSMUSG00000104913.2	ENSMUST00000198588.2	1591	1	-85	-543	-85	543	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	820	False	NA	NA	False	AATAAA	-13	NA	22931251	22929032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_22929000_22931300
Isoform_150045_27	chr5	+	178	1	Intergenic	novelGene_8795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115257935	115258113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115257900_115258100
Isoform_150055_14	chr5	-	177	1	Intergenic	novelGene_8796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTTGCCTTGGTC	NA	False	NA	NA	False	NA	NA	NA	115276973	115276796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115276800_115277000
Isoform_15009_395	chr11	-	2360	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	53	4050	53	-4050	multi-exon	FALSE	canonical	3	360	junction_12	22.6180544894756	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGCATTCTTATT	NA	False	NA	82	True	AATAAA	-16	NA	85125903	85082137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
Isoform_150109_327	chr15	+	177	1	Intergenic	novelGene_3904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57954925	57955102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_57954900_57955100
Isoform_150114_5	chr5	-	1031	1	Genic_Genomic	ENSMUSG00000029544.17	novel	NA	NA	NA	NA	-1004	-6051	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCAGCAGG	9152	False	NA	NA	False	NA	NA	NA	115325371	115324340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_115324300_115325400
Isoform_150115_3	chr5	-	1368	1	Genic_Genomic	ENSMUSG00000029544.17	novel	NA	NA	NA	NA	-1341	-6051	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCAGCAGG	8815	False	NA	NA	False	NA	NA	NA	115325708	115324340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_115324300_115325700
Isoform_150117_3	chr5	+	2289	2	Intergenic	novelGene_8798	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCTGTGCAAGGGTTTG	4748	False	NA	NA	False	AATAAA	-15	NA	115332476	115334787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115333613_115333634
Isoform_150118_86	chr5	-	176	1	Intergenic	novelGene_8799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGTTGTTGTTTTGG	8254	False	NA	-1	True	NA	NA	NA	115340702	115340526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115340500_115340700
Isoform_150119_9	chr5	+	2929	1	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	-6	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCACTTGCCTTGAA	NA	False	NA	14	True	AATAAA	-16	NA	115376099	115379028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115376100_115379000
Isoform_150131_4	chr5	-	311	2	Intergenic	novelGene_8803	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	6187	False	NA	NA	False	NA	NA	NA	115458426	115458091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115458230_115458253
Isoform_150132_7	chr5	-	173	1	Intergenic	novelGene_8804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	6186	False	NA	NA	False	NA	NA	NA	115458427	115458254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115458300_115458400
Isoform_150136_5	chr5	+	814	2	Antisense	novelGene_ENSMUSG00000029536.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	2066	False	NA	NA	False	NA	NA	NA	115474117	115474961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_115474428_115474457
Isoform_150137_3	chr5	+	156	1	Intergenic	novelGene_8805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAATTTTTTTTA	1483	False	NA	NA	False	NA	NA	NA	115476160	115476316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115476200_115476300
Isoform_150143_3	chr5	+	747	1	NIC	ENSMUSG00000087292.2	novel	414	3	NA	NA	7	-36795	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTTTAAGTA	4770	False	NA	NA	False	NA	NA	NA	115497143	115497890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_115497100_115497900
Isoform_150144_33	chr5	-	177	1	Intergenic	novelGene_8806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	115500875	115500698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115500700_115500900
Isoform_150145_6	chr5	+	180	1	Intergenic	novelGene_8807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCTCCAAAACA	2062	False	NA	NA	False	NA	NA	NA	115502733	115502913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115502700_115502900
Isoform_150146_3	chr5	-	302	1	Intergenic	novelGene_8808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAAGTTTTCC	4182	False	NA	NA	False	NA	NA	NA	115516461	115516159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115516200_115516500
Isoform_150147_38	chr5	-	175	1	Intergenic	novelGene_8809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	3970	False	NA	NA	False	NA	NA	NA	115516673	115516498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115516500_115516700
Isoform_150148_17	chr5	-	183	1	Intergenic	novelGene_8810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	115551941	115551758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115551800_115551900
Isoform_15015_181	chr11	-	6436	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	16	11	16	-11	multi-exon	TRUE	canonical	3	360	junction_12	22.6180544894756	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTAGTGTATGCTTCCGA	NA	False	NA	-11	True	AATAAA	-14	NA	85125940	85078098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
Isoform_150150_12	chr5	+	154	1	Intergenic	novelGene_8811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	115601525	115601679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115601500_115601700
Isoform_150156_291	chr5	+	178	1	Intergenic	novelGene_8812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7302	False	NA	NA	False	NA	NA	NA	115639347	115639525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115639300_115639500
Isoform_150157_12	chr5	+	199	1	Intergenic	novelGene_8813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGAGTTCAGGA	7513	False	NA	NA	False	NA	NA	NA	115639558	115639757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115639600_115639800
Isoform_150163_4	chr5	-	763	1	FSM	ENSMUSG00000107121.2	ENSMUST00000201728.2	768	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGACATTAGTTTTCC	NA	False	NA	NA	False	AATACA	-17	NA	115769870	115769107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115769100_115769900
Isoform_150165_8	chr5	+	158	1	Intergenic	novelGene_8814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	115791460	115791618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115791500_115791600
Isoform_150169_24	chr5	+	180	1	Intergenic	novelGene_8815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATATTTTATTAG	NA	False	NA	NA	False	NA	NA	NA	115836739	115836919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115836700_115836900
Isoform_150170_4	chr5	-	3270	1	FSM	ENSMUSG00000073147.4	ENSMUST00000101522.3	2110	1	576	-1736	-7	1736	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACAATAACAACA	NA	False	NA	NA	False	NA	NA	NA	23638341	23635071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_23635100_23638300
Isoform_150171_15	chr5	-	1044	1	FSM	ENSMUSG00000073147.4	ENSMUST00000189045.2	1983	1	934	5	1	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTCTGGTAAATATTC	NA	False	NA	NA	False	AATAAA	-14	NA	23638333	23637289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_23637300_23638300
Isoform_150172_4	chr5	-	2032	1	FSM	ENSMUSG00000073147.4	ENSMUST00000189045.2	1983	1	-56	7	-56	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGCTTCTGGTAAATAT	NA	False	NA	NA	False	AATAAA	-12	NA	23639323	23637291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_23637300_23639300
Isoform_150173_99	chr5	-	173	1	Intergenic	novelGene_8816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	115904554	115904381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115904400_115904600
Isoform_150174_8	chr5	+	176	1	Intergenic	novelGene_8817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGATTTATTTAAGT	5752	False	NA	NA	False	NA	NA	NA	115914466	115914642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115914500_115914600
Isoform_150177_6	chr2	+	252	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	346	-118	346	118	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	134646214	134646466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_134646200_134646500
Isoform_150178_13	chr5	-	502	1	FSM	ENSMUSG00000083833.5	ENSMUST00000118829.2	483	1	101	-120	101	120	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115940117	115939615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_115939600_115940100
Isoform_150181_17	chr5	+	180	1	Intergenic	novelGene_8818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCC	NA	False	NA	NA	False	NA	NA	NA	115972327	115972507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_115972300_115972500
Isoform_150182_3	chr5	-	154	1	Intergenic	novelGene_8819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTGTGGAGT	NA	False	NA	NA	False	NA	NA	NA	115984900	115984746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115984700_115984900
Isoform_150183_5	chr5	-	182	1	Intergenic	novelGene_8820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGCATTTTGAAA	995	False	NA	NA	False	NA	NA	NA	116023487	116023305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_116023300_116023500
Isoform_150184_218	chr5	-	1425	1	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAGGAAAAAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	116146293	116144868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_116144900_116146300
Isoform_150190_6	chr5	-	320	1	Intergenic	novelGene_8821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116165661	116165341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_116165300_116165700
Isoform_150192_8	chr5	-	346	1	Intergenic	novelGene_8822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTCGAAAAACAGAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	116180959	116180613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_116180600_116181000
Isoform_150195_3	chr5	-	177	1	Intergenic	novelGene_8823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAAAGTGTCATGCA	NA	False	NA	NA	False	NA	NA	NA	116252836	116252659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_116252700_116252800
Isoform_150196_3	chr5	-	151	1	Intergenic	novelGene_8824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116425220	116425069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_116425100_116425200
Isoform_150197_3	chr5	+	172	1	Intergenic	novelGene_8825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	116522317	116522489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_116522300_116522500
Isoform_150198_14	chr5	-	198	1	Intergenic	novelGene_8363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGATACTTAAACCACAA	NA	False	NA	NA	False	NA	NA	NA	23655909	23655711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_23655700_23655900
Isoform_150200_21	chr5	-	177	1	Intergenic	novelGene_8826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAAGAGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	117205016	117204839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_117204800_117205000
Isoform_150201_12	chr5	-	177	1	Intergenic	novelGene_8827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	117211552	117211375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_117211400_117211600
Isoform_150203_5	chr5	+	177	1	Intergenic	novelGene_8828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGTGATTTCCAA	7441	False	NA	NA	False	NA	NA	NA	117248353	117248530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_117248400_117248500
Isoform_150204_3	chr5	-	1893	1	Intergenic	novelGene_8829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGTTTCACAAAGACCT	NA	False	NA	NA	False	NA	NA	NA	117266666	117264773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_117264800_117266700
Isoform_150212_15	chr5	+	175	1	Intergenic	novelGene_8364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAGAAAAGAAAA	2118	False	NA	NA	False	NA	NA	NA	23678239	23678414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_23678200_23678400
Isoform_150216_4	chr5	-	525	1	Intergenic	novelGene_8830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCATGCGCCACCACA	NA	False	NA	NA	False	TTTAAA	-39	NA	117538726	117538201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_117538200_117538700
Isoform_150217_52	chr5	+	166	1	Intergenic	novelGene_8831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATCTATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	117627222	117627388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_117627200_117627400
Isoform_150218_43	chr5	-	171	1	Intergenic	novelGene_8832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	117641645	117641474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_117641500_117641600
Isoform_150219_7	chr5	-	178	1	Intergenic	novelGene_8833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	117652102	117651924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_117651900_117652100
Isoform_150220_5	chr5	+	179	1	Intergenic	novelGene_8834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCGGGTGGTGGTGGTAC	NA	False	NA	NA	False	NA	NA	NA	117960377	117960556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_117960400_117960600
Isoform_150224_4	chr5	+	174	1	Intergenic	novelGene_8835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	7111	False	NA	NA	False	NA	NA	NA	118162060	118162234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_118162100_118162200
Isoform_150234_3	chr5	+	159	1	Intergenic	novelGene_8836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAACAAAACAAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	118334552	118334711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_118334600_118334700
Isoform_150235_8	chr5	+	160	1	Intergenic	novelGene_8837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAATAAA	6673	False	NA	NA	False	NA	NA	NA	118388325	118388485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_118388300_118388500
Isoform_150236_7	chr5	+	193	1	Intergenic	novelGene_8838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	118392650	118392843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_118392600_118392800
Isoform_15024_4	chr11	-	6966	20	NIC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_19	19.7350876413186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGTCCGATGACTTA	NA	False	NA	NA	False	AATAAA	-15	NA	86092018	85948962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091899
Isoform_150241_3	chr5	+	1082	1	Intergenic	novelGene_8840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAACAAACAAACAA	2578	False	NA	NA	False	NA	NA	NA	118652174	118653256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_118652200_118653300
Isoform_150245_20	chr5	+	1397	1	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	203321	2	13653	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCGAGTGGCTCTTTTC	NA	False	NA	28	True	AATAAA	-16	NA	118902104	118903501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_118902100_118903500
Isoform_150248_10	chr5	-	178	1	Intergenic	novelGene_8841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118970412	118970234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_118970200_118970400
Isoform_150249_25	chr5	+	172	1	Intergenic	novelGene_8842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTTTAAAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	119654162	119654334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_119654200_119654300
Isoform_15025_64	chr11	-	3853	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	13	3065	13	-3065	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATATTCTTCATTGGAA	NA	False	NA	-25	True	GATAAA	-21	NA	86092006	85952028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
Isoform_150254_27	chr5	+	173	1	Intergenic	novelGene_8843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	119723572	119723745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_119723600_119723700
Isoform_150255_3	chr5	-	736	1	Antisense	novelGene_ENSMUSG00000018604.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCGGCTCGCTCCTTTTT	NA	False	NA	NA	False	AATAAA	-43	NA	119808905	119808169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_119808200_119808900
Isoform_150256_181	chr5	+	2647	1	FSM	ENSMUSG00000018604.19	ENSMUST00000202034.2	2995	1	349	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAGAAGAAAAAAAA	NA	False	NA	NA	False	AATACA	-8	NA	119809082	119811729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_119809100_119811700
Isoform_150282_6	chr5	-	239	1	Intergenic	novelGene_8844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	119869882	119869643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_119869600_119869900
Isoform_150285_3	chr5	-	177	1	Intergenic	novelGene_8845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	120215417	120215240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_120215200_120215400
Isoform_150286_14	chr5	+	181	1	Intergenic	novelGene_8846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATATAAATTATCTGA	NA	False	NA	NA	False	NA	NA	NA	120253550	120253731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_120253600_120253700
Isoform_150289_96	chr5	-	183	1	Intergenic	novelGene_8847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	120354261	120354078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_120354100_120354300
Isoform_150290_16	chr5	-	229	1	Intergenic	novelGene_8848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCGGGGATTGGGTGCT	NA	False	NA	NA	False	NA	NA	NA	120379375	120379146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_120379100_120379400
Isoform_150295_29	chr5	+	164	1	Intergenic	novelGene_8849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAGATAAAAAGGC	2486	False	NA	NA	False	NA	NA	NA	120651827	120651991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_120651800_120652000
Isoform_150296_45	chr5	+	166	1	Intergenic	novelGene_8850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTTTGAAAGAAAGA	1054	False	NA	1	True	NA	NA	NA	120656441	120656607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_120656400_120656600
Isoform_150297_3	chr5	-	1316	1	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	53200	5	53121	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCGGCTGCAGCCTTTG	9899	False	NA	-4	True	AATAAA	-17	NA	120673538	120672222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_120672200_120673500
Isoform_15030_25	chr11	-	6921	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	13	-3	13	3	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCCGATGACTTATC	NA	False	NA	NA	False	AATAAA	-17	NA	86092006	85948960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
Isoform_150301_214	chr5	-	176	1	Intergenic	novelGene_8851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGCAATCAAATAAT	387	False	NA	NA	False	NA	NA	NA	120777259	120777083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_120777100_120777300
Isoform_150303_3	chr5	+	639	1	Intergenic	novelGene_8852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120948355	120948994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_120948400_120949000
Isoform_150305_73	chr5	-	225	1	Intergenic	novelGene_8853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTGTATCCTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	120992257	120992032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_120992000_120992300
Isoform_150318_6	chr5	-	174	1	Intergenic	novelGene_8854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	121275906	121275732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_121275700_121275900
Isoform_150324_137	chr5	+	182	1	Intergenic	novelGene_8855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATTAGACCTTAA	NA	False	NA	3	True	NA	NA	NA	121351487	121351669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_121351500_121351700
Isoform_150327_3	chr5	+	326	1	Intergenic	novelGene_8856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCTCCAGACAGAATT	1254	False	NA	NA	False	AATAAA	-8	NA	121355220	121355546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_121355200_121355500
Isoform_150328_32	chr5	-	174	1	Intergenic	novelGene_8857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATTCTCAGCCG	NA	False	NA	NA	False	NA	NA	NA	121356247	121356073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_121356100_121356200
Isoform_150329_13	chr5	-	245	1	Intergenic	novelGene_8858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGTCTAATAAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	121362259	121362014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_121362000_121362300
Isoform_150330_52	chr5	-	177	1	Intergenic	novelGene_8750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGATAATCAGA	NA	False	NA	NA	False	NA	NA	NA	110289369	110289192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110289200_110289400
Isoform_150331_42	chr5	-	175	1	Intergenic	novelGene_8365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACAAATTAGGGC	3692	False	NA	NA	False	NA	NA	NA	23919229	23919054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_23919100_23919200
Isoform_150332_56	chr5	-	157	1	Intergenic	novelGene_8859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	121416478	121416321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_121416300_121416500
Isoform_150333_66	chr5	-	177	1	Intergenic	novelGene_8860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATGCACTTA	NA	False	NA	NA	False	NA	NA	NA	121426579	121426402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_121426400_121426600
Isoform_150334_3	chr5	+	156	1	Intergenic	novelGene_8861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAATAAATAAATCTAAA	1710	False	NA	NA	False	NA	NA	NA	121485500	121485656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_121485500_121485700
Isoform_150336_5	chr5	-	176	1	Intergenic	novelGene_8862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	121488935	121488759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_121488800_121488900
Isoform_150340_4	chr5	-	316	1	Intergenic	novelGene_8366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATAGAGACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	23943194	23942878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_23942900_23943200
Isoform_150347_3	chr5	-	2111	2	NNC	ENSMUSG00000029454.16	novel	592	7	NA	NA	176	-9188	at_least_one_novel_splicesite	FALSE	non_canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121683792	121681657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_-_121683715_121683738
Isoform_150350_3	chr5	-	170	1	Antisense	novelGene_ENSMUSG00000106590.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGAAGCCAGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	121732951	121732781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_121732800_121733000
Isoform_150351_6	chr5	+	1900	1	Intergenic	novelGene_8863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGTCTCGAAAAAACCAAAA	4047	False	NA	NA	False	NA	NA	NA	121757104	121759004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_121757100_121759000
Isoform_150352_34	chr5	+	195	1	Intergenic	novelGene_8864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATCTTTATTTAAAA	8909	False	NA	NA	False	NA	NA	NA	121761966	121762161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_121762000_121762200
Isoform_150353_30	chr5	-	176	1	Intergenic	novelGene_8865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121776080	121775904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_121775900_121776100
Isoform_150355_4	chr5	-	175	1	Intergenic	novelGene_8866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAATAAATAAATAA	7978	False	NA	NA	False	NA	NA	NA	121840873	121840698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_121840700_121840900
Isoform_150356_10	chr5	-	723	1	Antisense	novelGene_ENSMUSG00000042605.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAGTTTAAATTGGT	9579	False	NA	NA	False	ATTAAA	-25	NA	121849569	121848846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_121848800_121849600
Isoform_150358_3	chr5	-	164	1	Intergenic	novelGene_8867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121864271	121864107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_121864100_121864300
Isoform_150361_6	chr5	+	175	1	Intergenic	novelGene_8367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTTTTAAAAAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	23970495	23970670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_23970500_23970700
Isoform_150364_13	chr5	+	181	1	Intergenic	novelGene_8868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACACTGACACACCTAT	1657	False	NA	NA	False	NA	NA	NA	122208467	122208648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_122208500_122208600
Isoform_150367_95	chr5	-	172	1	Intergenic	novelGene_8869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAATTCTCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	122286082	122285910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_122285900_122286100
Isoform_150368_10	chr19	+	210	2	Intergenic	novelGene_5722	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGCTAAAGTAATTTGAG	5802	False	NA	NA	False	NA	NA	NA	25180886	25188218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_25180905_25188026
Isoform_15037_3	chr11	-	624	4	NIC	ENSMUSG00000034329.17	novel	507	5	NA	NA	-12	184	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	45.365184888855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAATTTCTGATCTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	86092004	86085674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_86085994_86088694_86088807_86089697_86089821_86091934
Isoform_150371_8	chr5	+	161	1	Intergenic	novelGene_8870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCACCTGTGTTTGCAT	6899	False	NA	NA	False	NA	NA	NA	122316061	122316222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_122316100_122316200
Isoform_150372_3	chr5	-	169	1	Intergenic	novelGene_8871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATCTTTAAAAAAAAAAAAG	2440	False	NA	NA	False	NA	NA	NA	122321475	122321306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_122321300_122321500
Isoform_150374_3	chr5	-	176	1	Intergenic	novelGene_8872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAAAAGTTATAGCA	4559	False	NA	NA	False	NA	NA	NA	122349640	122349464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_122349500_122349600
Isoform_150376_4	chr5	+	175	1	Intergenic	novelGene_8873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	122389891	122390066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_122389900_122390100
Isoform_150378_19	chr5	-	175	1	Intergenic	novelGene_8874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCACTGAAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	122404289	122404114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_122404100_122404300
Isoform_150379_5	chr5	-	173	1	Intergenic	novelGene_8875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATACAATCCAG	NA	False	NA	NA	False	NA	NA	NA	122412494	122412321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_122412300_122412500
Isoform_150380_8	chr5	+	188	1	Intergenic	novelGene_8876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGTAATGACGATGATG	NA	False	NA	NA	False	NA	NA	NA	122421004	122421192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_122421000_122421200
Isoform_150381_5	chr5	+	4536	2	NNC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	21	-33392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTTGGTTTTGAGTTTT	-19	True	NA	NA	False	AATAAA	-16	NA	122422448	122427011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_122423716_122423742
Isoform_150382_6	chr5	-	317	1	Intergenic	novelGene_8877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGTGCCTTCCTTGGAA	NA	False	NA	NA	False	NA	NA	NA	122437529	122437212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_122437200_122437500
Isoform_150386_5	chr5	-	193	1	Intergenic	novelGene_8878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	122562229	122562036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_122562000_122562200
Isoform_150394_7	chr5	+	179	1	Intergenic	novelGene_8879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTATGTATGGGG	NA	False	NA	NA	False	NA	NA	NA	122610548	122610727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_122610500_122610700
Isoform_150400_3	chr5	+	922	1	Intergenic	novelGene_8880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATTTAAAAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	122640507	122641429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_122640500_122641400
Isoform_150403_7	chr5	+	171	1	Intergenic	novelGene_8881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTAAAAAAGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	122797236	122797407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_122797200_122797400
Isoform_150404_7	chr5	-	174	1	Intergenic	novelGene_8882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	122861320	122861146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_122861100_122861300
Isoform_150405_8	chr6	+	158	1	Intergenic	novelGene_9400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAATTTAAAAAA	3086	False	NA	NA	False	NA	NA	NA	67149343	67149501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_67149300_67149500
Isoform_150406_3	chr5	+	193	1	Intergenic	novelGene_8883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGCTTACAGCCCAGTG	NA	False	NA	NA	False	NA	NA	NA	122902485	122902678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_122902500_122902700
Isoform_150418_21	chr5	+	175	1	Intergenic	novelGene_8885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	123010937	123011112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123010900_123011100
Isoform_150421_3	chr5	+	5407	1	Intergenic	novelGene_8886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAAACACCAAACTCTAT	NA	False	NA	NA	False	NA	NA	NA	123031790	123037197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123031800_123037200
Isoform_150425_121	chr5	+	178	1	Intergenic	novelGene_8887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAATAAATGGA	595	False	NA	NA	False	NA	NA	NA	123142853	123143031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123142900_123143000
Isoform_150426_18	chr5	-	1405	1	Intergenic	novelGene_8888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAAAATGAGCCATGTC	7943	False	NA	NA	False	NA	NA	NA	123170323	123168918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123168900_123170300
Isoform_150427_21	chr5	-	176	1	Intergenic	novelGene_8889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAAAATCCTGAGAG	9993	False	NA	NA	False	NA	NA	NA	123171480	123171304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123171300_123171500
Isoform_150428_5	chr5	-	175	1	Intergenic	novelGene_8890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGGAGGGAGCAGAGAT	878	False	NA	NA	False	NA	NA	NA	123181839	123181664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123181700_123181800
Isoform_150429_3	chr5	-	176	1	Intergenic	novelGene_8891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAGCAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	123183133	123182957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123183000_123183100
Isoform_15043_29	chr11	-	5992	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	4	-1	intron_retention	FALSE	canonical	3	33	junction_24	49.1211726244397	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTAGCTTTTATGTTTTA	NA	False	NA	NA	False	TATAAA	-21	NA	86148387	86101507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
Isoform_150430_22	chr5	-	176	1	Intergenic	novelGene_8892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123199581	123199405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123199400_123199600
Isoform_150431_6	chr5	-	202	1	Intergenic	novelGene_8893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAAGCTTGCTGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	123205284	123205082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123205100_123205300
Isoform_150432_17	chr5	+	177	1	Intergenic	novelGene_8894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGTTTGTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	123209251	123209428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123209300_123209400
Isoform_150433_3	chr5	-	163	1	Intergenic	novelGene_8895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTACCATGTCCAGATTTT	NA	False	NA	NA	False	NA	NA	NA	123224564	123224401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123224400_123224600
Isoform_150434_9	chr5	-	178	1	Intergenic	novelGene_8896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAGAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	123226461	123226283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123226300_123226500
Isoform_150439_10	chr19	-	183	1	Intergenic	novelGene_5751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTAGTTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	32394039	32393856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_32393900_32394000
Isoform_150440_4	chr5	+	769	1	FSM	ENSMUSG00000029440.16	ENSMUST00000196137.2	774	1	-6	11	-6	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123366314	123367083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_123366300_123367100
Isoform_150444_5	chr5	-	158	1	Intergenic	novelGene_8898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	123431440	123431282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123431300_123431400
Isoform_150446_4	chr5	+	2884	1	NIC	ENSMUSG00000029438.10	novel	4161	8	NA	NA	6	-12941	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATAAATTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	123482516	123485400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_123482500_123485400
Isoform_150447_25	chr5	+	174	1	Intergenic	novelGene_8368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	24221290	24221464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_24221300_24221500
Isoform_150448_11	chr5	-	1823	1	Antisense	novelGene_ENSMUSG00000029438.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	123497467	123495644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_123495600_123497500
Isoform_150451_4	chr5	+	160	1	Intergenic	novelGene_8899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAGTCACATTCT	3060	False	NA	NA	False	NA	NA	NA	123513678	123513838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123513700_123513800
Isoform_150452_17	chr5	+	156	1	Intergenic	novelGene_8900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATACATCTTTA	NA	False	NA	NA	False	NA	NA	NA	123525843	123525999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123525800_123526000
Isoform_150453_11	chr5	-	179	1	Intergenic	novelGene_8901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	123538849	123538670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123538700_123538800
Isoform_150454_8	chr5	-	196	1	Intergenic	novelGene_8902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	123551135	123550939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123550900_123551100
Isoform_150457_6	chr5	+	182	1	Intergenic	novelGene_8903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAATCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123623880	123624062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123623900_123624100
Isoform_150458_3	chr5	+	180	1	Intergenic	novelGene_8904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATCTTTTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	123676238	123676418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123676200_123676400
Isoform_150459_7	chr5	+	155	1	Intergenic	novelGene_8369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAAGAAAATT	2756	False	NA	NA	False	NA	NA	NA	24259518	24259673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_24259500_24259700
Isoform_15046_12	chr11	-	5903	27	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_24	54.4039243276486	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTAGCTTTTATGTTTTA	NA	False	NA	NA	False	TATAAA	-21	NA	86148387	86101507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029_86148242_86148330
Isoform_150460_27	chr5	-	177	1	Intergenic	novelGene_8905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTTACATTGTGA	7583	False	NA	NA	False	NA	NA	NA	123676751	123676574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123676600_123676800
Isoform_150461_11	chr5	+	180	1	Intergenic	novelGene_8906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCCACACT	NA	False	NA	NA	False	NA	NA	NA	123749401	123749581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123749400_123749600
Isoform_150462_3	chr5	-	173	1	Intergenic	novelGene_8907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTTAAAAAAATTTATAA	NA	False	NA	NA	False	NA	NA	NA	123759436	123759263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123759300_123759400
Isoform_150466_10	chr5	+	373	1	Intergenic	novelGene_8908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	162	False	NA	NA	False	NA	NA	NA	123809803	123810176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123809800_123810200
Isoform_150469_10	chr5	+	269	1	Intergenic	novelGene_8909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAGGAGACTGTTTGGA	NA	False	NA	NA	False	NA	NA	NA	123827325	123827594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123827300_123827600
Isoform_15047_5	chr11	-	5691	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	5	junction_25	53.2315695804661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGCTTTTATGTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	86148388	86101508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148330
Isoform_150472_61	chr5	-	172	1	Intergenic	novelGene_8910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	4120	False	NA	NA	False	NA	NA	NA	123861384	123861212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_123861200_123861400
Isoform_150473_4	chr5	+	158	1	Intergenic	novelGene_8911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACGAAGTCTAGCAAAG	NA	False	NA	NA	False	AAAAAG	-3	NA	123862136	123862294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123862100_123862300
Isoform_150474_6	chr5	-	5660	1	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	-183	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTAAAAAACAAACGTCATA	4324	False	NA	NA	False	TTTAAA	-33	NA	123887474	123881814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_123881800_123887500
Isoform_150476_10	chr5	+	540	1	NIC	ENSMUSG00000029414.12	novel	347	2	NA	NA	0	-3795	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123887788	123888328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_123887800_123888300
Isoform_150478_67	chr5	-	951	1	FSM	ENSMUSG00000106133.2	ENSMUST00000197957.2	349	1	-62	-540	-62	540	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGCTTAAAAGTCCAAAA	5853	False	NA	NA	False	AATAAA	-45	NA	24323724	24322773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_24322800_24323700
Isoform_150480_8	chr5	-	172	1	Intergenic	novelGene_8912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGATATATTTG	4432	False	NA	NA	False	NA	NA	NA	124031379	124031207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124031200_124031400
Isoform_150481_19	chr5	+	172	1	Intergenic	novelGene_8913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	642	False	NA	NA	False	NA	NA	NA	124033200	124033372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124033200_124033400
Isoform_150482_3	chr5	+	170	1	Intergenic	novelGene_8914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTAAAAAATGTTAACAA	6476	False	NA	NA	False	NA	NA	NA	124042735	124042905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124042700_124042900
Isoform_150484_16	chr5	-	175	1	Intergenic	novelGene_8916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGCTTAAACTCCTT	8460	False	NA	NA	False	NA	NA	NA	124075015	124074840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124074800_124075000
Isoform_150485_3	chr5	-	172	1	Intergenic	novelGene_8917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAAAAAAAGTTAATT	9553	False	NA	NA	False	NA	NA	NA	124086231	124086059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124086100_124086200
Isoform_150486_37	chr2	+	176	1	Intergenic	novelGene_6035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAACAACAAAAAAAAAAG	5780	False	NA	NA	False	NA	NA	NA	25278282	25278458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_25278300_25278500
Isoform_150489_5	chr5	-	231	1	Intergenic	novelGene_8918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAAAAAATGTTTTT	8521	False	NA	NA	False	TTTAAA	-33	NA	124195715	124195484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124195500_124195700
Isoform_150490_4	chr5	-	192	1	Intergenic	novelGene_8370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACATTCTAAAGTGTTTG	7413	False	NA	NA	False	NA	NA	NA	24337166	24336974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_24337000_24337200
Isoform_150491_25	chr5	+	2082	1	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	-7	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254177	124256259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_124254200_124256300
Isoform_150495_8	chr5	+	373	1	Intergenic	novelGene_8919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124347153	124347526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124347200_124347500
Isoform_150496_8	chr5	-	169	1	Intergenic	novelGene_8371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTAAAAAACGGAGTTT	5413	False	NA	NA	False	NA	NA	NA	24339166	24338997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_24339000_24339200
Isoform_150498_7	chr5	+	172	1	Intergenic	novelGene_8920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	124418853	124419025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124418900_124419000
Isoform_150502_10	chr5	+	177	1	Intergenic	novelGene_8921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAAT	2306	False	NA	NA	False	NA	NA	NA	124485878	124486055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124485900_124486100
Isoform_150503_4	chr5	-	189	1	Intergenic	novelGene_8922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTGCTTTTTTGTTT	1440	False	NA	NA	False	NA	NA	NA	124495548	124495359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124495400_124495500
Isoform_150538_4	chr5	+	3083	1	Antisense	novelGene_ENSMUSG00000038095.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGATAGAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	124508264	124511347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_124508300_124511300
Isoform_15054_70	chr11	-	5895	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	10	1	1	-1	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTAGCTTTTATGTTTTA	NA	False	NA	NA	False	TATAAA	-21	NA	86148366	86101507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
Isoform_150540_55	chr5	-	174	1	Intergenic	novelGene_8923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124514025	124513851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124513900_124514000
Isoform_150542_8	chr5	+	176	1	Intergenic	novelGene_8924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATATGGG	8927	False	NA	NA	False	NA	NA	NA	124539641	124539817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124539600_124539800
Isoform_150543_10	chr5	+	186	1	Intergenic	novelGene_8925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAATTAAAAAA	6556	False	NA	NA	False	NA	NA	NA	124547861	124548047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124547900_124548000
Isoform_150544_10	chr5	+	179	1	Intergenic	novelGene_8926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCACAGG	2165	False	NA	NA	False	NA	NA	NA	124555076	124555255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124555100_124555300
Isoform_150545_259	chr5	-	175	1	Intergenic	novelGene_8927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGAAAGAAAACC	5526	False	NA	NA	False	NA	NA	NA	124573563	124573388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124573400_124573600
Isoform_150546_52	chr5	-	182	1	Intergenic	novelGene_8928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	124579612	124579430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124579400_124579600
Isoform_150548_15	chr5	-	258	1	Intergenic	novelGene_8929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTATTCCCGTCTCATA	NA	False	NA	NA	False	AATAAA	-25	NA	124581999	124581741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124581700_124582000
Isoform_150549_56	chr5	-	175	1	Intergenic	novelGene_8930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAAAAAAACCCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	124582000	124581825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124581800_124582000
Isoform_15055_7	chr11	-	5810	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	-43	139	-18	-139	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAATGTTAATATTCA	NA	False	NA	NA	False	AATAAA	-15	NA	86148419	86101645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
Isoform_150552_90	chr5	+	161	1	Intergenic	novelGene_8931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTTCTATAAGA	5771	False	NA	NA	False	NA	NA	NA	124604546	124604707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124604500_124604700
Isoform_150553_263	chr5	+	173	1	Intergenic	novelGene_8372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTATGTTTATAT	1231	False	NA	6	True	NA	NA	NA	24366045	24366218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_24366000_24366200
Isoform_150554_13	chr5	-	198	1	Intergenic	novelGene_8932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTATTCATTTTCCCCT	NA	False	NA	NA	False	NA	NA	NA	124612827	124612629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124612600_124612800
Isoform_150556_32	chr6	-	173	1	Genic_Genomic	ENSMUSG00000001521.13	novel	NA	NA	NA	NA	-6319	2	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128308829	128308656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_128308700_128308800
Isoform_150560_186	chr5	+	194	1	Intergenic	novelGene_8934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTATAGCACCATGCCCA	NA	False	NA	NA	False	NA	NA	NA	124677685	124677879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124677700_124677900
Isoform_150568_19	chr5	-	1805	1	Intergenic	novelGene_8935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124726490	124724685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124724700_124726500
Isoform_150570_5	chr5	+	177	1	Intergenic	novelGene_8936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124747543	124747720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124747500_124747700
Isoform_150571_8	chr5	-	415	2	Antisense	novelGene_ENSMUSG00000118662.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATCACTGGATGCTAAGA	NA	False	NA	NA	False	NA	NA	NA	124749011	124748565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_124748668_124748698
Isoform_150575_35	chr5	-	176	1	Intergenic	novelGene_8937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	124773142	124772966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124773000_124773100
Isoform_150578_11	chr5	-	178	1	Intergenic	novelGene_8939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGAAAAATAAAGAG	9028	False	NA	NA	False	NA	NA	NA	124853465	124853287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_124853300_124853500
Isoform_15058_30	chr11	-	5826	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	50	junction_25	39.3049615188719	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGCTTTTATGTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	86148387	86101508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148330
Isoform_150599_10	chr5	-	214	1	Intergenic	novelGene_8940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTATCAGAGGGCTGTG	7282	False	NA	NA	False	NA	NA	NA	125282461	125282247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_125282200_125282500
Isoform_150600_10	chr5	-	172	1	Intergenic	novelGene_8941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	8773	False	NA	NA	False	NA	NA	NA	125291762	125291590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_125291600_125291800
Isoform_150603_9	chr5	+	175	1	Intergenic	novelGene_8943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTAAAAAAATACGTGT	NA	False	NA	NA	False	NA	NA	NA	125352162	125352337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_125352200_125352300
Isoform_150608_508	chr5	-	211	1	Intergenic	novelGene_8944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	508	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTATTTTGTGCTGTT	NA	False	NA	-2	True	TTTAAA	-11	NA	125443060	125442849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_125442800_125443100
Isoform_150616_13	chr5	-	1993	1	ISM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	2051	6	1223	6	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATTTGTGTTGTTGGT	NA	False	NA	-6	True	AATAAA	-20	NA	125465027	125463034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_125463000_125465000
Isoform_15064_4	chr11	-	9535	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-694	1705	-694	-1705	multi-exon	TRUE	canonical	3	30	junction_26	15.4932381399703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGTGACAACCATACC	8462	False	NA	NA	False	AATAAA	-27	NA	86249122	86159563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
Isoform_15065_9	chr11	-	7859	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-694	3381	-694	2133	multi-exon	FALSE	canonical	3	30	junction_26	15.4932381399703	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTAGAGTATTATT	8462	False	NA	NA	False	ATTAAA	-14	NA	86249122	86161239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
Isoform_150658_17	chr17	+	178	1	Intergenic	novelGene_5213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	88164168	88164346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_88164200_88164300
Isoform_150660_28	chr5	-	1625	1	Antisense	novelGene_ENSMUSG00000037905.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	125536905	125535280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_125535300_125536900
Isoform_150661_3	chr5	+	1570	1	ISM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	17225	8	17043	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCAGACTCCTGGATG	3314	False	NA	22	True	AATAAA	-14	NA	125535856	125537426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_125535900_125537400
Isoform_150663_3	chr5	-	168	1	Intergenic	novelGene_8948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	125547430	125547262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_125547300_125547400
Isoform_150664_56	chr5	-	178	1	Intergenic	novelGene_8949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125561425	125561247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_125561200_125561400
Isoform_150666_8	chr5	-	176	1	Intergenic	novelGene_8950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTATTTTTTATTAAT	NA	False	NA	NA	False	NA	NA	NA	125569434	125569258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_125569300_125569400
Isoform_150667_21	chr5	+	182	1	Intergenic	novelGene_8951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGAATGTTTTACCC	NA	False	NA	NA	False	NA	NA	NA	125595642	125595824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_125595600_125595800
Isoform_150669_46	chr5	-	171	1	Intergenic	novelGene_8952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	125655239	125655068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_125655100_125655200
Isoform_150671_10	chr5	+	176	1	Intergenic	novelGene_8953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGAGTTCATT	NA	False	NA	NA	False	NA	NA	NA	126071834	126072010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_126071800_126072000
Isoform_150673_13	chr5	-	179	1	Intergenic	novelGene_8954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTTTTAAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	126814914	126814735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_126814700_126814900
Isoform_150674_4	chr5	-	1591	1	Intergenic	novelGene_8955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	127323804	127322213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_127322200_127323800
Isoform_150675_5	chr5	+	169	1	Intergenic	novelGene_8956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGACCTGAGG	1572	False	NA	NA	False	NA	NA	NA	127659069	127659238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_127659100_127659200
Isoform_150676_9	chr5	+	1417	1	Antisense	novelGene_ENSMUSG00000029416.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAGAAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	127691169	127692586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_127691200_127692600
Isoform_150677_9	chr5	-	166	1	Intergenic	novelGene_8957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATTTTAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	127721132	127720966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_127721000_127721100
Isoform_150678_23	chr5	-	177	1	Intergenic	novelGene_8958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAAAAAAAAAGAAGATT	NA	False	NA	NA	False	NA	NA	NA	127732080	127731903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_127731900_127732100
Isoform_150680_25	chr5	+	2117	1	Antisense	novelGene_ENSMUSG00000038295.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGGCAAAGGATGGGC	4908	False	NA	NA	False	NA	NA	NA	24592059	24594176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_24592100_24594200
Isoform_150682_3	chr5	+	275	1	Intergenic	novelGene_8959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTGGGGACCAATGTGA	NA	False	NA	NA	False	AATAAA	-33	NA	128032172	128032447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_128032200_128032400
Isoform_150684_12	chr5	+	198	1	Intergenic	novelGene_8960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTATAAGACTCATGCC	NA	False	NA	NA	False	NA	NA	NA	128173289	128173487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_128173300_128173500
Isoform_150685_5	chr5	+	181	1	Intergenic	novelGene_8961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATTCAGGAGT	NA	False	NA	NA	False	NA	NA	NA	128304253	128304434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_128304300_128304400
Isoform_150687_4	chr5	+	176	1	Intergenic	novelGene_8962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAGAAAAAAAAAGA	5848	False	NA	NA	False	NA	NA	NA	128450189	128450365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_128450200_128450400
Isoform_150689_4	chr5	+	250	1	Intergenic	novelGene_8963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATAGTGCCACTGAAG	NA	False	NA	NA	False	NA	NA	NA	128632543	128632793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_128632500_128632800
Isoform_150690_14	chr5	+	180	1	Intergenic	novelGene_8964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	128665147	128665327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_128665100_128665300
Isoform_150691_43	chr5	+	3281	1	FSM	ENSMUSG00000081683.6	ENSMUST00000117102.4	3250	1	-31	0	-31	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGTCACTGTGCATT	NA	False	NA	14	True	AATAAA	-17	NA	128677876	128681157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_128677900_128681200
Isoform_150693_693	chr5	+	3257	1	FSM	ENSMUSG00000081683.6	ENSMUST00000117102.4	3250	1	-7	0	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	693	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGTCACTGTGCATT	NA	False	NA	14	True	AATAAA	-17	NA	128677900	128681157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_128677900_128681200
Isoform_150709_3	chr5	-	160	1	Intergenic	novelGene_8965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	129080409	129080249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_129080200_129080400
Isoform_150710_92	chr5	+	175	1	Intergenic	novelGene_8966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGAGTGTAAGCCCA	NA	False	NA	8	True	NA	NA	NA	129080783	129080958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_129080800_129081000
Isoform_150711_5	chr5	-	177	1	Intergenic	novelGene_8374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGCTA	4786	False	NA	NA	False	NA	NA	NA	24601573	24601396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_24601400_24601600
Isoform_150712_3	chr5	-	1493	1	Intergenic	novelGene_8967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAACTAGCCAAAAG	NA	False	NA	NA	False	NA	NA	NA	129097032	129095539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_129095500_129097000
Isoform_150719_9	chr5	+	177	1	Intergenic	novelGene_8968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGAGCTGT	NA	False	NA	NA	False	NA	NA	NA	129107866	129108043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_129107900_129108000
Isoform_150720_17	chr5	-	179	1	Intergenic	novelGene_8969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGCTGCTGCTGCTGC	6485	False	NA	NA	False	NA	NA	NA	129122084	129121905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_129121900_129122100
Isoform_150724_36	chr5	-	270	1	FSM	ENSMUSG00000060419.9	ENSMUST00000140155.2	441	1	229	-58	229	58	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	129205352	129205082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129205100_129205400
Isoform_150726_8	chr5	-	181	1	Intergenic	novelGene_8970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATAAAAAAAAGTATATA	NA	False	NA	NA	False	NA	NA	NA	129226684	129226503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_129226500_129226700
Isoform_150727_11	chr5	+	178	1	Intergenic	novelGene_8971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	129231893	129232071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_129231900_129232100
Isoform_150728_17	chr5	+	165	1	Intergenic	novelGene_8329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTAACTATTATAT	NA	False	NA	NA	False	NA	NA	NA	3763708	3763873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_3763700_3763900
Isoform_150731_23	chr5	+	3384	1	FSM	ENSMUSG00000029439.15	ENSMUST00000199887.2	3398	1	0	14	0	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTGAAA	NA	False	NA	NA	False	AATAGA	-36	NA	129578309	129581693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_129578300_129581700
Isoform_150735_23	chr5	-	412	1	FSM	ENSMUSG00000057244.7	ENSMUST00000079261.7	882	1	511	-41	511	41	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATTACAG	4552	False	NA	NA	False	AATAAA	-18	NA	129700424	129700012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129700000_129700400
Isoform_150736_4	chr5	-	943	1	FSM	ENSMUSG00000057244.7	ENSMUST00000079261.7	882	1	-23	-38	-23	38	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAGAATTA	4018	False	NA	NA	False	AATAAA	-15	NA	129700958	129700015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129700000_129701000
Isoform_150737_6	chr5	-	177	1	Intergenic	novelGene_8375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATAAATAAACACAT	7871	False	NA	NA	False	NA	NA	NA	24677555	24677378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_24677400_24677600
Isoform_150739_42	chr5	-	170	1	Intergenic	novelGene_8972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTTAAAAAAAAATAAGTG	NA	False	NA	NA	False	NA	NA	NA	129799948	129799778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_129799800_129799900
Isoform_15074_7	chr11	-	2454	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	86.0969995605732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCTGTGGCTTGTCT	NA	False	NA	-5	True	AATAAA	-20	NA	86435602	86392859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
Isoform_15075_147	chr11	-	2332	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	36	3163	-4	-1	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCTGTGGCTTGTCT	NA	False	NA	-5	True	AATAAA	-20	NA	86435595	86392859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_150752_4	chr5	-	168	1	Intergenic	novelGene_8974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATCTTAAAAAAAAAAAA	6502	False	NA	NA	False	NA	NA	NA	129880959	129880791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_129880800_129881000
Isoform_150755_4	chr5	+	176	1	Intergenic	novelGene_8376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATGTAATTAAAGCA	2604	False	NA	NA	False	NA	NA	NA	24712183	24712359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_24712200_24712400
Isoform_150756_16	chr5	-	186	1	FSM	ENSMUSG00000025537.13	ENSMUST00000200832.2	2119	1	645	1288	645	-1288	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	129900173	129899987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129900000_129900200
Isoform_150759_203	chr5	+	173	1	Intergenic	novelGene_8589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86034790	86034963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_86034800_86035000
Isoform_150760_26	chr5	+	175	1	Intergenic	novelGene_8976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAAGCTGCTGCTG	1703	False	NA	NA	False	NA	NA	NA	129920261	129920436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_129920300_129920400
Isoform_150761_65	chr5	-	181	1	Intergenic	novelGene_8977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129921628	129921447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_129921400_129921600
Isoform_150762_6	chr5	-	203	1	Antisense	novelGene_ENSMUSG00000034173.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGCCGAAGGAGTAGC	NA	False	NA	NA	False	NA	NA	NA	129925904	129925701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_129925700_129925900
Isoform_150763_12	chr5	+	180	1	Intergenic	novelGene_8978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATCCTAATTCTT	NA	False	NA	NA	False	NA	NA	NA	129966446	129966626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_129966400_129966600
Isoform_150764_13	chr5	+	211	1	Intergenic	novelGene_8979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	129967430	129967641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_129967400_129967600
Isoform_150765_165	chr5	-	178	1	Intergenic	novelGene_8980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	129982010	129981832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_129981800_129982000
Isoform_150773_8	chr5	+	176	1	Intergenic	novelGene_8981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTCTTCAACTTCCA	NA	False	NA	NA	False	NA	NA	NA	130020553	130020729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_130020600_130020700
Isoform_150775_8	chr5	-	180	1	Intergenic	novelGene_8982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	130090235	130090055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_130090100_130090200
Isoform_150779_28	chrX	+	161	1	Intergenic	novelGene_12234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	149673554	149673715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_149673600_149673700
Isoform_150782_17	chr5	+	182	1	Intergenic	novelGene_8983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGCAGAATATGTGT	NA	False	NA	NA	False	NA	NA	NA	130235526	130235708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_130235500_130235700
Isoform_150783_4	chr5	-	170	1	Intergenic	novelGene_8984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130267591	130267421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_130267400_130267600
Isoform_150790_6	chr5	-	170	1	Intergenic	novelGene_8377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGACAAAT	NA	False	NA	NA	False	NA	NA	NA	24786382	24786212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_24786200_24786400
Isoform_150791_10	chr5	-	1913	1	Intergenic	novelGene_8985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130368182	130366269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_130366300_130368200
Isoform_150792_4	chr5	+	285	1	Intergenic	novelGene_8986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGGGATCAGCGTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	130863543	130863828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_130863500_130863800
Isoform_150793_6	chr5	+	178	1	Intergenic	novelGene_8987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	131107492	131107670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_131107500_131107700
Isoform_150797_6	chr5	+	207	1	Intergenic	novelGene_8988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACAGGACCCCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	131307701	131307908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_131307700_131307900
Isoform_150798_6	chr5	-	2069	1	FSM	ENSMUSG00000029673.20	ENSMUST00000198165.2	3695	1	-737	2363	-55	-2363	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAATTAGGGA	NA	False	NA	NA	False	NA	NA	NA	131567581	131565512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_131565500_131567600
Isoform_150804_9	chr5	+	3934	1	Intergenic	novelGene_8989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCTTGAGGCACTTC	NA	False	NA	NA	False	NA	NA	NA	132471786	132475720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_132471800_132475700
Isoform_150805_3	chr5	+	195	1	Antisense	novelGene_ENSMUSG00000105624.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132521301	132521496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_132521300_132521500
Isoform_150807_6	chr1	+	389	1	FSM	ENSMUSG00000058603.11	ENSMUST00000121497.2	414	1	69	-44	69	44	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	127966374	127966763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127966400_127966800
Isoform_150815_3	chr5	+	637	1	FSM	ENSMUSG00000104195.2	ENSMUST00000192229.2	599	1	-12	-26	0	26	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTGCCCCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	134205184	134205821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_134205200_134205800
Isoform_150816_4	chr5	-	1847	1	Antisense	novelGene_ENSMUSG00000015942.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAAAAAAAGGCCC	8859	False	NA	NA	False	NA	NA	NA	134213250	134211403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_134211400_134213200
Isoform_150820_13	chr5	+	1440	1	Antisense	novelGene_ENSMUSG00000060261.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134277849	134279289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_134277800_134279300
Isoform_150821_4	chr5	+	2374	1	Antisense	novelGene_ENSMUSG00000060261.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGGGAGGCCTACA	NA	False	NA	NA	False	AAAACA	-35	NA	134292588	134294962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_134292600_134295000
Isoform_150823_21	chr5	+	2105	1	Antisense	novelGene_ENSMUSG00000107000.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134297467	134299572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_134297500_134299600
Isoform_150824_9	chr5	+	4895	1	Antisense	novelGene_ENSMUSG00000060261.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	134300958	134305853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_134301000_134305900
Isoform_150825_3	chr5	+	163	1	Intergenic	novelGene_8990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	134310293	134310456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134310300_134310500
Isoform_150827_5	chr5	+	179	1	Intergenic	novelGene_8991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	134335609	134335788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134335600_134335800
Isoform_150828_66	chr5	-	175	1	Intergenic	novelGene_8992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCAAAACAA	6290	False	NA	NA	False	NA	NA	NA	134337945	134337770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_134337800_134337900
Isoform_150829_16	chr5	-	178	1	Intergenic	novelGene_8993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATCACTTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	134350075	134349897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_134349900_134350100
Isoform_15083_25	chr11	-	3033	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	36	2462	-4	700	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTCCTGCCTTAAGG	NA	False	NA	NA	False	AATAAA	-25	NA	86435595	86392158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_150830_3	chr5	-	195	1	Intergenic	novelGene_8994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAGAAAAA	NA	False	NA	NA	False	AATAGA	-27	NA	134352256	134352061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_134352100_134352300
Isoform_150833_34	chr5	+	176	1	Intergenic	novelGene_8995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	134356578	134356754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134356600_134356800
Isoform_150835_10	chr5	+	212	1	Intergenic	novelGene_8996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACTTACTTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	134371892	134372104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134371900_134372100
Isoform_150837_3	chr5	+	174	1	Intergenic	novelGene_8997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	134407080	134407254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134407100_134407300
Isoform_150839_3	chr5	+	2559	1	Antisense	novelGene_ENSMUSG00000028949.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCTTAGGCTGGATAAG	NA	False	NA	NA	False	NA	NA	NA	24800130	24802689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_24800100_24802700
Isoform_150840_123	chr5	+	175	1	Intergenic	novelGene_8998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAAGCGGCACTT	NA	False	NA	5	True	NA	NA	NA	134558306	134558481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134558300_134558500
Isoform_150841_3	chr5	-	1960	1	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	-13	-4163	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7008	False	NA	NA	False	NA	NA	NA	24806987	24805027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_24805000_24807000
Isoform_150842_5	chr5	+	171	1	Intergenic	novelGene_8999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134566726	134566897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134566700_134566900
Isoform_150844_7	chr5	+	191	1	Intergenic	novelGene_9000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACAGGTGTGTGTTAC	NA	False	NA	NA	False	NA	NA	NA	134610597	134610788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134610600_134610800
Isoform_150847_11	chr5	+	188	1	Intergenic	novelGene_9001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	134645372	134645560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134645400_134645600
Isoform_15085_22	chr11	-	5494	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	33	4	2	-4	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAACAGTTATAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	86435598	86389700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_150866_9	chr5	-	259	1	Intergenic	novelGene_9002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAATCTTAAAAAAAA	5267	False	NA	NA	False	NA	NA	NA	134683377	134683118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_134683100_134683400
Isoform_150868_49	chr5	-	183	1	Intergenic	novelGene_9003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATCT	NA	False	NA	NA	False	NA	NA	NA	134691640	134691457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_134691500_134691600
Isoform_150869_7	chr5	+	949	1	Intergenic	novelGene_9004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	7847	False	NA	NA	False	NA	NA	NA	134711406	134712355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134711400_134712400
Isoform_15087_5	chr11	-	2392	17	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	95.2312973764403	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCTGTGGCTTGTCT	NA	False	NA	-5	True	AATAAA	-20	NA	86435595	86392859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408058_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_150870_49	chr5	+	176	1	Intergenic	novelGene_9005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	134767286	134767462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_134767300_134767500
Isoform_150871_14	chr5	+	198	1	Intergenic	novelGene_8378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCATGATGTCTGTTCA	6626	False	NA	NA	False	NA	NA	NA	24849620	24849818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_24849600_24849800
Isoform_150874_1397	chr5	-	1802	1	FSM	ENSMUSG00000047501.4	ENSMUST00000051401.4	1816	1	8	6	8	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	1397	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTGGGCTGTTCTCTA	NA	False	NA	-15	True	AATAAA	-19	NA	134975780	134973978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_134974000_134975800
Isoform_15088_7	chr11	-	2314	5	ISM	ENSMUSG00000020516.16	ENSMUST00000058286.9	3250	10	10	4182	1	1479	5prime_fragment	FALSE	canonical	3	250	junction_4	14.2543852901484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGAAAACC	NA	False	NA	NA	False	NA	NA	NA	86435590	86408990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_150891_22	chr5	-	177	1	Intergenic	novelGene_9006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAAAAGGATTTGTG	9456	False	NA	NA	False	NA	NA	NA	134999393	134999216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_134999200_134999400
Isoform_150892_5	chr5	+	1478	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	-220	1	-220	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCGCTGGAGCTTCCTTA	4821	False	NA	37	True	AATAAA	-17	NA	135014847	135016325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135014800_135016300
Isoform_150894_45	chr5	+	1249	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	13	-3	13	3	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGAGCTTCCTTATCCT	5054	False	NA	41	True	AATAAA	-21	NA	135015080	135016329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135015100_135016300
Isoform_150895_85	chr5	+	1208	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	52	-1	52	1	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGGAGCTTCCTTATC	5093	False	NA	39	True	AATAAA	-19	NA	135015119	135016327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135015100_135016300
Isoform_150898_12	chr5	-	176	1	Intergenic	novelGene_9007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7671	False	NA	NA	False	NA	NA	NA	135045745	135045569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135045600_135045700
Isoform_150899_4	chr5	-	182	1	Intergenic	novelGene_9008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGATGAATGAAAAA	4283	False	NA	NA	False	NA	NA	NA	135049133	135048951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135049000_135049100
Isoform_150901_4	chr5	+	375	1	NIC	ENSMUSG00000007207.11	novel	2162	10	NA	NA	1344	-2623	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7226	False	NA	NA	False	NA	NA	NA	135071463	135071838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_135071500_135071800
Isoform_150902_11	chr5	+	174	1	Intergenic	novelGene_9009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	135076923	135077097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_135076900_135077100
Isoform_150904_166	chr5	+	1124	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	42	495	42	-495	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATTTGTTTTTCTGTGT	3174	False	NA	52	True	AAAAAG	-23	NA	135093097	135094221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135093100_135094200
Isoform_150905_22	chr5	+	1356	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	40	265	40	-265	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAC	3172	False	NA	NA	False	NA	NA	NA	135093095	135094451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_135093100_135094500
Isoform_150906_4	chr5	+	176	1	Intergenic	novelGene_9010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGCAAAAAACTAAA	85	False	NA	NA	False	NA	NA	NA	135128749	135128925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_135128700_135128900
Isoform_150907_38	chr5	-	184	1	Intergenic	novelGene_9011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACTTGAT	NA	False	NA	NA	False	NA	NA	NA	135182774	135182590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135182600_135182800
Isoform_150910_4	chr5	-	5115	1	Intergenic	novelGene_9012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135222433	135217318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135217300_135222400
Isoform_150913_11	chr5	-	176	1	Intergenic	novelGene_9013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	135232244	135232068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135232100_135232200
Isoform_150915_43	chr5	-	178	1	Intergenic	novelGene_9014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAATC	NA	False	NA	NA	False	NA	NA	NA	135258541	135258363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135258400_135258500
Isoform_150925_4	chr5	-	3154	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	-5	-856	-5	856	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGATAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	135280089	135276935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135276900_135280100
Isoform_150926_158	chr5	-	2300	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	-6	-1	-6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTTCTATCTGGGC	NA	False	NA	-1	True	AATAAA	-14	NA	135280090	135277790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_135277800_135280100
Isoform_150929_7	chr5	+	176	1	Intergenic	novelGene_9015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	135306319	135306495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_135306300_135306500
Isoform_15093_811	chr11	-	1956	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	1	830	1	235	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTCCGTTTTCTTTA	9873	False	NA	-2	True	TATAAA	-21	NA	86574661	86475520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
Isoform_150931_263	chr5	-	177	1	Intergenic	novelGene_9016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTAACTTAAAT	NA	False	NA	NA	False	NA	NA	NA	135311352	135311175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135311200_135311400
Isoform_150935_6	chr5	+	2018	1	Genic_Genomic	ENSMUSG00000000600.16	novel	NA	NA	NA	NA	-10	-4518	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATACCTTTAGT	7975	False	NA	NA	False	NA	NA	NA	3853173	3855191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_3853200_3855200
Isoform_150943_17	chr9	+	171	1	Intergenic	novelGene_11457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71904995	71905166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_71905000_71905200
Isoform_150946_15	chr2	+	177	1	Intergenic	novelGene_6670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAATAAAAAA	8352	False	NA	NA	False	NA	NA	NA	155207969	155208146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155208000_155208100
Isoform_150947_43	chr5	-	175	1	Intergenic	novelGene_9018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	4986	False	NA	NA	False	NA	NA	NA	135522736	135522561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135522600_135522700
Isoform_150949_8	chr5	+	1801	1	NIC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	-12	-1123	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	135661545	135663346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_135661500_135663300
Isoform_15095_15	chr11	-	2410	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	1	376	1	-376	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGAGATGTTTGCTTT	9873	False	NA	NA	False	AATAAA	-37	NA	86574661	86475066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
Isoform_150950_22	chr5	+	156	1	Intergenic	novelGene_9019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATAAATCTTT	6894	False	NA	NA	False	NA	NA	NA	135696092	135696248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_135696100_135696200
Isoform_150952_690	chr5	+	181	1	Intergenic	novelGene_9020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	690	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5675	False	NA	NA	False	NA	NA	NA	135721663	135721844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_135721700_135721800
Isoform_150957_34	chr5	-	173	1	Intergenic	novelGene_9021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	135787617	135787444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135787400_135787600
Isoform_150961_17	chr5	+	171	1	Intergenic	novelGene_9022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACCAAAACAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	135824211	135824382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_135824200_135824400
Isoform_150962_42	chr5	+	175	1	Intergenic	novelGene_9023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACATACATACATT	3393	False	NA	NA	False	NA	NA	NA	135866441	135866616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_135866400_135866600
Isoform_150964_8	chr5	+	169	1	Intergenic	novelGene_9024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	135901524	135901693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_135901500_135901700
Isoform_150965_12	chr5	-	173	1	Intergenic	novelGene_9025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATCAATTGTGGAGA	3603	False	NA	NA	False	NA	NA	NA	135907973	135907800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_135907800_135908000
Isoform_15099_62	chr11	-	1177	6	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	-19012	232	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	277.055517902098	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAATTGTGTCCGTTTTCT	NA	False	NA	-5	True	TATAAA	-18	NA	86512133	86475523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86512073
Isoform_15100_25	chr11	-	6231	33	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-18	41	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	263.096136703748	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCATGGTTTTCATAGT	NA	False	NA	-4	True	ATTAAA	-14	NA	86648345	86585439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_86586517_86588090_86588167_86591886_86591908_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
Isoform_151006_6	chr5	+	245	1	Intergenic	novelGene_9026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGCCAGGCAGTGTTGG	7758	False	NA	NA	False	NA	NA	NA	135970707	135970952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_135970700_135971000
Isoform_151011_6	chr5	+	212	1	Intergenic	novelGene_9027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTGAGGCCAGCCTG	8941	False	NA	NA	False	NA	NA	NA	136003781	136003993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_136003800_136004000
Isoform_151012_65	chr5	-	165	1	Intergenic	novelGene_9028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATTAAAAAAAAAGAATGC	NA	False	NA	NA	False	NA	NA	NA	136021588	136021423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_136021400_136021600
Isoform_151014_3	chr5	-	175	1	Intergenic	novelGene_9029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	136097618	136097443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_136097400_136097600
Isoform_151015_6	chr5	-	178	1	Intergenic	novelGene_9030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	136104751	136104573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_136104600_136104800
Isoform_151020_7	chr5	-	759	1	Intergenic	novelGene_9031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	136181016	136180257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_136180300_136181000
Isoform_151024_12	chr5	+	173	1	Intergenic	novelGene_8379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAAATAATAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	24963756	24963929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_24963800_24963900
Isoform_151025_4	chr5	-	176	1	Intergenic	novelGene_9032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAGCAAGCAGGGAC	7149	False	NA	NA	False	NA	NA	NA	136542448	136542272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_136542300_136542400
Isoform_151027_6	chr5	+	5631	1	Intergenic	novelGene_9033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136586547	136592178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_136586500_136592200
Isoform_151028_77	chr5	-	177	1	Intergenic	novelGene_9034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	136636829	136636652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_136636700_136636800
Isoform_151031_3	chr5	+	265	1	Intergenic	novelGene_9035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCCTTA	NA	False	NA	NA	False	NA	NA	NA	136787343	136787608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_136787300_136787600
Isoform_151032_4	chr5	+	182	1	Intergenic	novelGene_9036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAACACCCATACATAC	2759	False	NA	NA	False	NA	NA	NA	136922367	136922549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_136922400_136922500
Isoform_151033_27	chr5	+	173	1	Intergenic	novelGene_9037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAATAAATAAAAA	6952	False	NA	NA	False	NA	NA	NA	136926560	136926733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_136926600_136926700
Isoform_151034_91	chr5	+	201	1	Intergenic	novelGene_8380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTTCTCTCCGAGGCA	9754	False	NA	NA	False	NA	NA	NA	24995605	24995806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_24995600_24995800
Isoform_151036_13	chr5	+	1883	1	Intergenic	novelGene_9038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGAAAACCTTC	2031	False	NA	NA	False	NA	NA	NA	136969966	136971849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_136970000_136971800
Isoform_151037_19	chr5	+	191	1	Intergenic	novelGene_9039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGATCCTGGGGACCGTG	1042	False	NA	NA	False	NA	NA	NA	136988704	136988895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_136988700_136988900
Isoform_151041_11	chr5	-	175	1	Intergenic	novelGene_9040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATTAAAA	9889	False	NA	NA	False	NA	NA	NA	137052768	137052593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_137052600_137052800
Isoform_151042_14	chr5	+	180	1	Intergenic	novelGene_8942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAAACATACA	NA	False	NA	NA	False	NA	NA	NA	125332963	125333143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_125333000_125333100
Isoform_151044_17	chr5	+	1039	1	FSM	ENSMUSG00000051502.8	ENSMUST00000052825.7	1037	1	-4	2	-4	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGGCCCAGCCTGTGT	1540	False	NA	5	True	NA	NA	NA	137292886	137293925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_137292900_137293900
Isoform_151046_33	chr5	+	178	1	Intergenic	novelGene_9042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTTATGTAATATAATA	NA	False	NA	NA	False	NA	NA	NA	137325004	137325182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_137325000_137325200
Isoform_151048_3	chr5	+	229	1	Intergenic	novelGene_9043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACATCCCTTCAAG	NA	False	NA	NA	False	TATAAA	-10	NA	137332412	137332641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_137332400_137332600
Isoform_151052_3	chr5	+	1320	1	Antisense	novelGene_ENSMUSG00000079173.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	137399529	137400849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_137399500_137400800
Isoform_151056_14	chr5	-	1001	1	FSM	ENSMUSG00000029715.6	ENSMUST00000111035.2	988	1	-14	1	-14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1718	False	NA	-33	True	AATAAA	-19	NA	137500701	137499700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_137499700_137500700
Isoform_151068_38	chr5	+	186	1	Intergenic	novelGene_9045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATTAGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	137541828	137542014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_137541800_137542000
Isoform_151069_3	chr5	-	180	1	Intergenic	novelGene_8330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTCTTCTAAGTGTAT	NA	False	NA	NA	False	NA	NA	NA	3870716	3870536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_3870500_3870700
Isoform_151070_12	chr5	+	169	1	Intergenic	novelGene_9046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	137589228	137589397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_137589200_137589400
Isoform_151071_3	chr5	+	697	1	Antisense	novelGene_ENSMUSG00000037221.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	137595196	137595893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_137595200_137595900
Isoform_151072_19	chr5	+	165	1	Intergenic	novelGene_9047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	137596612	137596777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_137596600_137596800
Isoform_151073_5	chr5	+	160	1	Intergenic	novelGene_9048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATTTTATTTAGTAT	781	False	NA	NA	False	NA	NA	NA	137602853	137603013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_137602900_137603000
Isoform_151076_3	chr5	-	162	1	Intergenic	novelGene_9049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATCTGCT	NA	False	NA	NA	False	NA	NA	NA	137720947	137720785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_137720800_137720900
Isoform_151085_21	chr5	-	189	1	Intergenic	novelGene_9050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCCCAGTACAGGGGAAT	NA	False	NA	0	True	NA	NA	NA	137762043	137761854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_137761900_137762000
Isoform_151086_3	chr5	+	174	1	Intergenic	novelGene_9051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	2547	False	NA	NA	False	NA	NA	NA	137764244	137764418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_137764200_137764400
Isoform_151087_87	chr5	-	181	1	Intergenic	novelGene_9052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	137769823	137769642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_137769600_137769800
Isoform_151088_31	chr5	+	1182	1	NIC	ENSMUSG00000029725.11	novel	956	4	NA	NA	20	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777185	137778367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_137777200_137778400
Isoform_151089_3	chr5	+	243	1	Intergenic	novelGene_9053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGAGGGAATAGGG	898	False	NA	NA	False	AATAAA	-7	NA	137788760	137789003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_137788800_137789000
Isoform_151092_45	chr5	-	189	1	Intergenic	novelGene_9054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAATTTTTACATTT	NA	False	NA	NA	False	NA	NA	NA	138090053	138089864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_138089900_138090100
Isoform_151093_5	chr5	-	3232	2	Antisense	novelGene_ENSMUSG00000106102.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	3	135	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	138105249	138101997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_138104765_138104784
Isoform_151094_3	chr5	+	3473	2	Fusion	ENSMUSG00000029729.13_ENSMUSG00000106102.2	novel	4843	3	NA	NA	-2579	-2	multi-exon	FALSE	non_canonical	3	135	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTTTTAAATCCTCAT	4940	False	NA	2	True	NA	NA	NA	138102589	138106082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr5_+_138104765_138104784
Isoform_151095_134	chr5	+	175	1	Intergenic	novelGene_9055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGTTCCCTTAAAA	4443	False	NA	NA	False	NA	NA	NA	138108180	138108355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_138108200_138108400
Isoform_151096_14	chr5	+	177	1	Antisense	novelGene_ENSMUSG00000037007.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	138140689	138140866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_138140700_138140900
Isoform_151097_65	chr5	-	188	1	Intergenic	novelGene_9056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAAACAAAACAAAAA	1015	False	NA	NA	False	NA	NA	NA	138154702	138154514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_138154500_138154700
Isoform_151099_3	chr5	-	389	1	Intergenic	novelGene_9057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATTTTTTGTCTTGCT	174	False	NA	NA	False	AATAAA	-15	NA	138155543	138155154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_138155200_138155500
Isoform_151103_4	chr5	+	2255	1	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	51	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAAAATAACA	8194	False	NA	NA	False	NA	NA	NA	138170380	138172635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_138170400_138172600
Isoform_151105_20	chr5	+	1323	1	FSM	ENSMUSG00000049285.5	ENSMUST00000057773.5	1308	1	-15	0	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCCTGATGTAAATGC	5016	False	NA	NA	False	AATAAA	-17	NA	138192560	138193883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138192600_138193900
Isoform_151119_24	chr5	+	1251	1	FSM	ENSMUSG00000046440.10	ENSMUST00000034916.10	967	1	-100	-184	-100	184	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTCAAAGTTTCTACC	NA	False	NA	NA	False	AATAAA	-31	NA	138502974	138504225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_138503000_138504200
Isoform_151120_5	chr5	+	171	1	Intergenic	novelGene_9058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTGCTTCACCAAACA	NA	False	NA	NA	False	NA	NA	NA	138751628	138751799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_138751600_138751800
Isoform_151130_38	chr5	+	176	1	Intergenic	novelGene_9059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	139296792	139296968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_139296800_139297000
Isoform_151132_29	chr5	+	175	1	Intergenic	novelGene_9061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTTGG	NA	False	NA	NA	False	NA	NA	NA	139334082	139334257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_139334100_139334300
Isoform_151133_4	chr5	+	163	1	Intergenic	novelGene_8382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25292682	25292845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_25292700_25292800
Isoform_151136_4	chr5	-	4113	1	NIC	ENSMUSG00000053581.14	novel	3169	7	NA	NA	-13	-1288	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8749	False	NA	NA	False	NA	NA	NA	139470232	139466119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_-_139466100_139470200
Isoform_151137_8	chr5	+	202	1	Intergenic	novelGene_9062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	139470809	139471011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_139470800_139471000
Isoform_151138_7	chr5	+	2062	1	FSM	ENSMUSG00000043833.7	ENSMUST00000171190.2	2025	1	-30	-7	-30	7	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGGAGTACAGACTTT	NA	False	NA	NA	False	TTTAAA	-14	NA	25305950	25308012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_25306000_25308000
Isoform_151139_3	chr5	+	152	1	Intergenic	novelGene_9063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	139519169	139519321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_139519200_139519300
Isoform_151142_54	chr5	+	176	1	Intergenic	novelGene_9064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGTGT	NA	False	NA	NA	False	NA	NA	NA	139764822	139764998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_139764800_139765000
Isoform_151143_37	chr5	+	177	1	Intergenic	novelGene_9065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTACT	NA	False	NA	NA	False	NA	NA	NA	139774037	139774214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_139774000_139774200
Isoform_151144_4	chr5	-	215	1	Intergenic	novelGene_9066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACCGAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	139880987	139880772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_139880800_139881000
Isoform_151145_23	chr14	-	188	1	Intergenic	novelGene_3590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACAATTAGACAA	NA	False	NA	NA	False	NA	NA	NA	61485338	61485150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_61485200_61485300
Isoform_151146_16	chr5	-	303	1	Intergenic	novelGene_9067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAGAACAT	NA	False	NA	NA	False	NA	NA	NA	139966591	139966288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_139966300_139966600
Isoform_151147_158	chr5	-	179	1	Intergenic	novelGene_9068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	140106039	140105860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_140105900_140106000
Isoform_151149_9	chr5	+	195	1	Intergenic	novelGene_9069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140159249	140159444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_140159200_140159400
Isoform_151152_6	chr4	-	178	1	Intergenic	novelGene_8292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155204247	155204069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155204100_155204200
Isoform_151153_22	chr5	+	182	1	Intergenic	novelGene_9070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACCATCCAGAGGTG	NA	False	NA	NA	False	NA	NA	NA	140319122	140319304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_140319100_140319300
Isoform_151155_214	chr5	+	175	1	Intergenic	novelGene_9071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140380791	140380966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_140380800_140381000
Isoform_151156_17	chr5	+	175	1	Intergenic	novelGene_9072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAAGAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	140386801	140386976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_140386800_140387000
Isoform_151157_3	chr5	+	177	1	Intergenic	novelGene_9073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAAGGGCCGAGC	3059	False	NA	NA	False	NA	NA	NA	140391313	140391490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_140391300_140391500
Isoform_151158_7	chr5	+	172	1	Intergenic	novelGene_9074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140403443	140403615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_140403400_140403600
Isoform_151160_5	chr5	-	179	1	Intergenic	novelGene_9075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAATTGAAGATGTTT	NA	False	NA	NA	False	NA	NA	NA	140439547	140439368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_140439400_140439500
Isoform_151161_3	chr5	+	345	1	Intergenic	novelGene_9076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	140451423	140451768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_140451400_140451800
Isoform_151169_6	chr5	+	461	1	FSM	ENSMUSG00000062353.7	ENSMUST00000118533.2	438	1	50	-73	50	73	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACCATGTTATTATTAA	NA	False	NA	NA	False	NA	NA	NA	3286480	3286941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3286500_3286900
Isoform_151171_10	chr5	+	244	1	FSM	ENSMUSG00000062353.7	ENSMUST00000118533.2	438	1	267	-73	267	73	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACCATGTTATTATTAA	NA	False	NA	NA	False	NA	NA	NA	3286697	3286941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_3286700_3286900
Isoform_151174_5	chr5	-	180	1	Intergenic	novelGene_9077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATAAAAAAAAAAAAAAAGG	6794	False	NA	NA	False	NA	NA	NA	140558272	140558092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_140558100_140558300
Isoform_151175_39	chr5	-	176	1	Intergenic	novelGene_9078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140681170	140680994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_140681000_140681200
Isoform_151176_7	chr5	-	165	1	Intergenic	novelGene_9079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAATCTTAGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	140720490	140720325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_140720300_140720500
Isoform_151186_4	chr5	-	192	1	Intergenic	novelGene_9080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAATGGTTGACTGATG	NA	False	NA	NA	False	NA	NA	NA	140881102	140880910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_140880900_140881100
Isoform_151187_11	chr5	+	170	1	Intergenic	novelGene_9081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTTTTTAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	141378385	141378555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_141378400_141378600
Isoform_151188_4	chr5	+	174	1	Intergenic	novelGene_9082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	142283008	142283182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142283000_142283200
Isoform_151189_3	chr5	+	898	1	Intergenic	novelGene_9083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCAATTTGGTATGGCC	NA	False	NA	NA	False	NA	NA	NA	142353538	142354436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142353500_142354400
Isoform_151190_31	chr5	-	177	1	Intergenic	novelGene_9084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGTACC	NA	False	NA	NA	False	NA	NA	NA	142438266	142438089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_142438100_142438300
Isoform_151191_3	chr5	+	665	1	NIC	ENSMUSG00000039623.14	novel	382	3	NA	NA	3	-1833	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATGTAATAAATTA	8703	False	NA	NA	False	NA	NA	NA	142449811	142450476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_142449800_142450500
Isoform_151193_4	chr5	-	2332	1	FSM	ENSMUSG00000074817.3	ENSMUST00000099400.3	4239	1	-2	1909	-2	-1909	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTATCTCAAAGGCCCT	NA	False	NA	NA	False	AATAAA	-17	NA	142515833	142513501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_142513500_142515800
Isoform_151195_24	chr2	+	176	1	Intergenic	novelGene_6039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	25959890	25960066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_25959900_25960100
Isoform_151196_19	chr5	-	176	1	Intergenic	novelGene_9086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGGTCTATGGGGA	NA	False	NA	NA	False	NA	NA	NA	142538870	142538694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_142538700_142538900
Isoform_151197_6	chr5	-	176	1	Intergenic	novelGene_9087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	142539969	142539793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_142539800_142540000
Isoform_151198_9	chr5	+	180	1	Intergenic	novelGene_9088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGAAATAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	142547413	142547593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142547400_142547600
Isoform_151199_4	chr5	-	207	1	Intergenic	novelGene_9089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGGAAACAGAG	5033	False	NA	NA	False	AAAACA	-6	NA	142559463	142559256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_142559300_142559500
Isoform_151200_16	chr5	+	192	1	Intergenic	novelGene_9090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	142579965	142580157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142580000_142580200
Isoform_151204_6	chr5	-	174	1	Intergenic	novelGene_9091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACATTACT	NA	False	NA	NA	False	NA	NA	NA	142713135	142712961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_142713000_142713100
Isoform_151208_10	chr5	-	172	1	Intergenic	novelGene_9093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAGAAGAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	142842118	142841946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_142841900_142842100
Isoform_151209_11	chr5	-	177	1	Intergenic	novelGene_9094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	142876212	142876035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_142876000_142876200
Isoform_151210_5	chr5	-	353	1	Intergenic	novelGene_9095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTAAAAGAAACCA	NA	False	NA	NA	False	NA	NA	NA	142883277	142882924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_142882900_142883300
Isoform_151212_3	chr5	+	1997	1	Antisense	novelGene_ENSMUSG00000029580.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-35	NA	142887403	142889400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_142887400_142889400
Isoform_151224_3	chr5	+	601	1	Antisense	novelGene_ENSMUSG00000029580.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	142892041	142892642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_142892000_142892600
Isoform_151226_7	chr5	+	174	1	Intergenic	novelGene_9097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGCTTA	9521	False	NA	NA	False	NA	NA	NA	142919508	142919682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142919500_142919700
Isoform_151228_41	chr5	-	181	1	Intergenic	novelGene_9098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAATAAAAAAAGGGG	5375	False	NA	NA	False	NA	NA	NA	142923732	142923551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_142923600_142923700
Isoform_151231_5	chr5	+	168	1	Intergenic	novelGene_8383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTAAGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	25719520	25719688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_25719500_25719700
Isoform_151243_6	chr5	+	201	1	Intergenic	novelGene_9099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTTATTATTAAATTAA	309	False	NA	NA	False	NA	NA	NA	142961503	142961704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142961500_142961700
Isoform_151244_13	chr5	+	190	1	Intergenic	novelGene_9100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATGTGGGTGTTGGG	1805	False	NA	NA	False	NA	NA	NA	142965488	142965678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142965500_142965700
Isoform_151250_7	chr5	+	159	1	Intergenic	novelGene_9102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	143091866	143092025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_143091900_143092000
Isoform_151252_27	chr5	-	176	1	Intergenic	novelGene_9103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTAAAAAAAATGAAGG	3308	False	NA	NA	False	NA	NA	NA	143109705	143109529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_143109500_143109700
Isoform_151254_36	chr5	+	172	1	Intergenic	novelGene_8384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTAGTTTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	25728925	25729097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_25728900_25729100
Isoform_151255_7	chr5	+	917	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	-162	699	-162	-699	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTGTATAGCCTTT	NA	False	NA	NA	False	TATAAA	-14	NA	25734848	25735765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_25734800_25735800
Isoform_151256_7	chr5	+	782	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	-27	699	-27	-699	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTGTATAGCCTTT	NA	False	NA	NA	False	TATAAA	-14	NA	25734983	25735765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_25735000_25735800
Isoform_151257_3	chr5	+	923	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	1	530	1	-530	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	25735011	25735934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_25735000_25735900
Isoform_151265_9	chr5	+	180	1	Intergenic	novelGene_9104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAACTGCATGTAG	4284	False	NA	NA	False	NA	NA	NA	143425602	143425782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_143425600_143425800
Isoform_151266_23	chr5	-	175	1	Intergenic	novelGene_9105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTTTGGGGTTAT	NA	False	NA	NA	False	NA	NA	NA	143432339	143432164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_143432200_143432300
Isoform_151271_14	chr5	+	157	1	Intergenic	novelGene_9106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	143546448	143546605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_143546400_143546600
Isoform_151272_6	chr5	+	177	1	Intergenic	novelGene_8385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	25800709	25800886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_25800700_25800900
Isoform_151274_3	chr5	+	208	1	FSM	ENSMUSG00000104708.2	ENSMUST00000199080.2	3706	1	1846	1652	1846	-1652	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTCCCCCACCTTGTAA	1896	False	NA	NA	False	AATGAA	-12	NA	143757640	143757848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_143757600_143757800
Isoform_151275_90	chr5	-	179	1	Intergenic	novelGene_9107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143784190	143784011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_143784000_143784200
Isoform_151277_8	chr5	+	1550	1	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	2	-1910	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	143846818	143848368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_143846800_143848400
Isoform_151278_16	chr5	-	184	1	Intergenic	novelGene_9108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAGAAGTTTCCCAA	NA	False	NA	NA	False	NA	NA	NA	143849088	143848904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_143848900_143849100
Isoform_151279_14	chr5	-	198	1	Intergenic	novelGene_9109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTTTTTTAA	2858	False	NA	NA	False	NA	NA	NA	143906953	143906755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_143906800_143907000
Isoform_151280_10	chr5	+	2732	1	Intergenic	novelGene_8386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25868017	25870749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_25868000_25870700
Isoform_151281_83	chr5	+	176	1	Intergenic	novelGene_9110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGTATGATACCAT	NA	False	NA	NA	False	NA	NA	NA	143954169	143954345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_143954200_143954300
Isoform_151282_15	chr5	+	180	1	Intergenic	novelGene_9111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	143966062	143966242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_143966100_143966200
Isoform_151283_5	chr5	+	1206	1	Genic_Genomic	ENSMUSG00000038970.8	novel	NA	NA	NA	NA	-65	-86628	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACAAATCTAGGCT	NA	False	NA	NA	False	AATAAA	-37	NA	144037188	144038394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_144037200_144038400
Isoform_151288_4	chr5	-	191	1	Intergenic	novelGene_9112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAACTGCTGTCACCA	NA	False	NA	NA	False	NA	NA	NA	144163779	144163588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_144163600_144163800
Isoform_151289_19	chr5	+	172	1	Intergenic	novelGene_9113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	144169086	144169258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_144169100_144169300
Isoform_151291_6	chr5	-	174	1	Intergenic	novelGene_9114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATGAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	144290821	144290647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_144290600_144290800
Isoform_151292_10	chr5	-	187	1	Intergenic	novelGene_9115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGTATAAGTAA	NA	False	NA	NA	False	NA	NA	NA	144305338	144305151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_144305200_144305300
Isoform_151293_3	chr2	-	181	1	Intergenic	novelGene_6764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7932	False	NA	NA	False	NA	NA	NA	165858026	165857845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_165857800_165858000
Isoform_151294_3	chr5	+	177	1	Intergenic	novelGene_9116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGGTAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	144318881	144319058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_144318900_144319100
Isoform_151295_6	chr5	+	175	1	Intergenic	novelGene_9117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	144327405	144327580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_144327400_144327600
Isoform_151300_3	chr5	+	1440	1	Intergenic	novelGene_9118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGGAAGGAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	144616021	144617461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_144616000_144617500
Isoform_151302_16	chr5	+	217	1	Intergenic	novelGene_9119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	144660972	144661189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_144661000_144661200
Isoform_151303_118	chr5	-	181	1	Intergenic	novelGene_9120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAAATCTATC	NA	False	NA	NA	False	NA	NA	NA	144661381	144661200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_144661200_144661400
Isoform_151304_5	chr5	+	175	1	Intergenic	novelGene_9121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAATTATTAAGCAATG	2496	False	NA	NA	False	NA	NA	NA	144681706	144681881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_144681700_144681900
Isoform_151306_8	chr5	-	177	1	Intergenic	novelGene_9123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATTAAACCGAA	NA	False	NA	NA	False	NA	NA	NA	144710624	144710447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_144710400_144710600
Isoform_151309_3	chr5	+	187	1	Intergenic	novelGene_9124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	144850026	144850213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_144850000_144850200
Isoform_151311_13	chr5	-	190	1	Intergenic	novelGene_9125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACACACACACAAAT	NA	False	NA	NA	False	NA	NA	NA	144931620	144931430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_144931400_144931600
Isoform_151318_74	chr5	+	176	1	Antisense	novelGene_ENSMUSG00000029623.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGTTAAACAGT	NA	False	NA	NA	False	NA	NA	NA	145070162	145070338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_145070200_145070300
Isoform_151319_28	chr5	-	189	1	Intergenic	novelGene_9126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAGCTCACTG	NA	False	NA	NA	False	NA	NA	NA	145092872	145092683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_145092700_145092900
Isoform_151320_4	chr5	-	3030	1	Antisense	novelGene_ENSMUSG00000029625.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	145109861	145106831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_145106800_145109900
Isoform_151325_4	chr5	-	894	1	FSM	ENSMUSG00000029627.13	ENSMUST00000198959.2	2243	1	13	1336	2	-1336	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTACTGGTTTTGAGATA	1604	False	NA	-5	True	AATAAA	-13	NA	145138665	145137771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_145137800_145138700
Isoform_151326_21	chr5	+	174	1	Intergenic	novelGene_9127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	145154077	145154251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_145154100_145154300
Isoform_151335_15	chr5	-	172	1	Intergenic	novelGene_9128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTATTTTAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	145215036	145214864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_145214900_145215000
Isoform_151337_9	chr5	-	3321	1	FSM	ENSMUSG00000040429.7	ENSMUST00000196417.2	1790	1	-21	-1510	-10	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATTTAAGATTACATT	NA	False	NA	NA	False	AATAAA	-7	NA	3943917	3940596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_3940600_3943900
Isoform_151342_3	chr5	+	175	1	Intergenic	novelGene_8387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATCCATGGAAG	NA	False	NA	NA	False	NA	NA	NA	26116956	26117131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_26117000_26117100
Isoform_151345_5	chr5	-	172	1	Intergenic	novelGene_9129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGGAAGGAAGGAAGGAA	6380	False	NA	NA	False	NA	NA	NA	146178936	146178764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_146178800_146178900
Isoform_151352_7	chr5	-	347	2	Antisense	novelGene_ENSMUSG00000029635.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	49	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAAATAAATAGGTAACT	2568	False	NA	NA	False	NA	NA	NA	146207095	146206725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_146206831_146206853
Isoform_151355_20	chr5	-	198	1	Intergenic	novelGene_9130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTCAACTCCCAA	NA	False	NA	NA	False	NA	NA	NA	146269147	146268949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_146268900_146269100
Isoform_151356_7	chr5	+	177	1	Intergenic	novelGene_8388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATATCTATCTTTGT	NA	False	NA	NA	False	NA	NA	NA	26273974	26274151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_26274000_26274200
Isoform_151357_4	chr5	+	1507	1	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	256	-81509	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTCATGAAATATGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146322050	146323557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_146322000_146323600
Isoform_151360_4	chr5	+	2606	2	NNC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	15377	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	47	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146407795	146410425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr5_+_146409754_146409777
Isoform_151363_3	chr5	+	239	1	Intergenic	novelGene_9131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACCACGCCCATATTGT	NA	False	NA	NA	False	AATAAA	-19	NA	146517631	146517870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_146517600_146517900
Isoform_151365_36	chr5	+	177	1	Intergenic	novelGene_9132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	146601234	146601411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_146601200_146601400
Isoform_151373_3	chr5	-	983	1	Intergenic	novelGene_9133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146769667	146768684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_146768700_146769700
Isoform_151376_34	chr5	-	172	1	Intergenic	novelGene_9134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTTAAATTTGAA	NA	False	NA	NA	False	NA	NA	NA	146804088	146803916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_146803900_146804100
Isoform_151377_5	chr5	+	221	1	Intergenic	novelGene_9135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTTTATCGGGTTT	NA	False	NA	NA	False	AATAAA	-7	NA	146829174	146829395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_146829200_146829400
Isoform_151379_223	chr5	-	169	1	Intergenic	novelGene_9136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146854588	146854419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_146854400_146854600
Isoform_151380_5	chr5	+	209	1	Intergenic	novelGene_9137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	9852	False	NA	NA	False	NA	NA	NA	146854992	146855201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_146855000_146855200
Isoform_151381_11	chr5	-	174	1	Intergenic	novelGene_9138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	146860190	146860016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_146860000_146860200
Isoform_151382_6	chr5	+	177	1	Intergenic	novelGene_9139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACAAACTTGGTT	NA	False	NA	NA	False	NA	NA	NA	146870895	146871072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_146870900_146871100
Isoform_151383_22	chr19	-	157	1	Intergenic	novelGene_5755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	32713811	32713654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_32713700_32713800
Isoform_151389_20	chr5	+	180	1	Intergenic	novelGene_9140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAATAGAAGATTAG	9361	False	NA	NA	False	NA	NA	NA	147086926	147087106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_147086900_147087100
Isoform_151393_3	chr5	+	165	1	Intergenic	novelGene_9141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTAAAAAAAAAAAAAGAGC	7842	False	NA	NA	False	NA	NA	NA	147196523	147196688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_147196500_147196700
Isoform_151395_8	chr5	+	177	1	Intergenic	novelGene_9142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147233359	147233536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_147233400_147233500
Isoform_151396_22	chr5	-	173	1	Intergenic	novelGene_9143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGTGCACTGCCA	NA	False	NA	NA	False	NA	NA	NA	147270917	147270744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_147270700_147270900
Isoform_151398_3	chr5	+	192	1	Intergenic	novelGene_9144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAGGCTTAA	NA	False	NA	NA	False	NA	NA	NA	147334091	147334283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_147334100_147334300
Isoform_151399_4	chr5	+	2533	1	FSM	ENSMUSG00000107037.2	ENSMUST00000202874.2	460	1	-1013	-1060	-1013	1060	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGGCCTCATGGTTC	2559	False	NA	NA	False	ATTAAA	-18	NA	147345716	147348249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_147345700_147348200
Isoform_151400_5	chr5	-	871	1	Intergenic	novelGene_9145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAACAAAACAA	NA	False	NA	NA	False	AATATA	-37	NA	147375501	147374630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_147374600_147375500
Isoform_151402_4	chr5	+	169	1	Intergenic	novelGene_9146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGCC	3374	False	NA	NA	False	NA	NA	NA	147471840	147472009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_147471800_147472000
Isoform_151406_6	chr5	+	172	1	Intergenic	novelGene_9147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTAAAAAAAATTGT	NA	False	NA	NA	False	NA	NA	NA	147627074	147627246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_147627100_147627200
Isoform_151407_4	chr5	-	172	1	Intergenic	novelGene_9148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	147688061	147687889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_147687900_147688100
Isoform_151408_25	chr5	-	182	1	Intergenic	novelGene_9149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTAAAACGTACAGA	NA	False	NA	NA	False	NA	NA	NA	147700947	147700765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_147700800_147700900
Isoform_151411_5	chr5	+	180	1	Intergenic	novelGene_9150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	5262	False	NA	NA	False	NA	NA	NA	147878537	147878717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_147878500_147878700
Isoform_151416_10	chr5	-	162	1	Intergenic	novelGene_9151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	147969091	147968929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_147968900_147969100
Isoform_151418_21	chr5	-	2716	1	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	69778	1	12603	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTGTGTGGTCTCAAG	NA	False	NA	-4	True	AATAAA	-19	NA	148266936	148264220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_148264200_148266900
Isoform_151431_8	chr5	-	4086	1	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	68407	2	11232	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTGTGGTCTCAA	NA	False	NA	-5	True	AATAAA	-18	NA	148268307	148264221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_148264200_148268300
Isoform_151462_19	chr5	+	178	1	Intergenic	novelGene_9152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAATAGGTGTTTGG	6464	False	NA	NA	False	NA	NA	NA	148309670	148309848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_148309700_148309800
Isoform_151463_5	chr5	+	3451	1	Intergenic	novelGene_9153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCAACCAAGAGACTCGA	7389	False	NA	NA	False	NA	NA	NA	148310595	148314046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_148310600_148314000
Isoform_151467_22	chr5	-	179	1	Intergenic	novelGene_9154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAAGAAGCTT	NA	False	NA	-2	True	NA	NA	NA	148718959	148718780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_148718800_148719000
Isoform_151469_15	chr5	+	174	1	Intergenic	novelGene_8389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAAAAAAGTTTTCCCC	NA	False	NA	NA	False	NA	NA	NA	27829938	27830112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_27829900_27830100
Isoform_151470_25	chr5	-	188	1	Intergenic	novelGene_9155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATTGATATTATT	NA	False	NA	NA	False	NA	NA	NA	148807941	148807753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_148807800_148807900
Isoform_151471_5	chr5	+	184	1	Intergenic	novelGene_9156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAATCTTTGAGA	NA	False	NA	NA	False	AGTAAA	-5	NA	148922267	148922451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_148922300_148922500
Isoform_151486_8	chr5	-	197	1	Intergenic	novelGene_9157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTCATATGTGAGTA	NA	False	NA	NA	False	NA	NA	NA	149068615	149068418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_149068400_149068600
Isoform_151487_61	chr5	-	213	1	Intergenic	novelGene_9158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTTTATAACATAAGAAG	NA	False	NA	NA	False	NA	NA	NA	149078142	149077929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_149077900_149078100
Isoform_151489_4	chr5	-	1831	1	FSM	ENSMUSG00000024437.7	ENSMUST00000025307.7	771	1	260	-1320	70	989	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTTCTTTATTTCCA	NA	False	NA	NA	False	AATAAA	-8	NA	149092759	149090928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_149090900_149092800
Isoform_151496_12	chr5	-	177	1	Intergenic	novelGene_9159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATGGAGCT	NA	False	NA	NA	False	NA	NA	NA	149467725	149467548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_149467500_149467700
Isoform_151499_130	chr6	-	175	1	Intergenic	novelGene_9318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAATTGCCT	NA	False	NA	NA	False	NA	NA	NA	39664931	39664756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39664800_39664900
Isoform_151500_44	chr5	-	200	1	Intergenic	novelGene_9161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCCTCCACAACCCTCAG	NA	False	NA	NA	False	NA	NA	NA	149563511	149563311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_149563300_149563500
Isoform_151501_8	chr5	-	173	1	Intergenic	novelGene_9163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	149574850	149574677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_149574700_149574800
Isoform_151504_5	chr5	-	3074	1	FSM	ENSMUSG00000002221.12	ENSMUST00000199714.2	3829	1	-1042	1797	-20	-1797	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGAAATTCCTGGGC	NA	False	NA	NA	False	NA	NA	NA	27996413	27993339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_27993300_27996400
Isoform_151505_4	chr5	+	978	1	Antisense	novelGene_ENSMUSG00000002221.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGGAGTTTTCCCTGC	1675	False	NA	NA	False	AATAAA	-17	NA	27996146	27997124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_27996100_27997100
Isoform_151510_3	chr5	+	177	1	Intergenic	novelGene_9165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTGAAAAAAAAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	149889066	149889243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_149889100_149889200
Isoform_151511_44	chr5	+	178	1	Intergenic	novelGene_9166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAGAGTTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	149924167	149924345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_149924200_149924300
Isoform_151513_7	chr5	-	185	1	Intergenic	novelGene_9167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	150094062	150093877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_150093900_150094100
Isoform_151514_3	chr5	+	217	1	ISM	ENSMUSG00000056602.14	ENSMUST00000203000.4	3670	7	229518	604	-51468	-604	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGAGTAGTGAATATTT	NA	False	NA	NA	False	NA	NA	NA	150271649	150271866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_+_150271600_150271900
Isoform_151515_13	chr5	-	177	1	Intergenic	novelGene_8390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATACCTAACTTT	NA	False	NA	NA	False	NA	NA	NA	27998533	27998356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_27998400_27998500
Isoform_151517_4	chr5	-	174	1	Intergenic	novelGene_9169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	150366685	150366511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_150366500_150366700
Isoform_151518_7	chr5	+	182	1	Intergenic	novelGene_9170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATAATAATACCT	NA	False	NA	NA	False	NA	NA	NA	150372216	150372398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_150372200_150372400
Isoform_151519_3	chr5	-	221	1	Intergenic	novelGene_9171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATCTTTTGAAAGTGC	NA	False	NA	NA	False	ATTAAA	-23	NA	150448976	150448755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_150448800_150449000
Isoform_151520_4	chr5	+	2235	1	Genic_Genomic	ENSMUSG00000041147.11	novel	NA	NA	NA	NA	-2109	-609	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTTGCCTTGGTCGTGG	4737	False	NA	NA	False	NA	NA	NA	150450461	150452696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_150450500_150452700
Isoform_151521_17	chr5	-	2190	1	Antisense	novelGene_ENSMUSG00000041147.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGACAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	150474609	150472419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_150472400_150474600
Isoform_151523_3	chr5	-	2777	1	Genic_Genomic	ENSMUSG00000041132.12	novel	NA	NA	NA	NA	-6	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGGATATGTCTTGTC	4554	False	NA	NA	False	AATAAA	-11	NA	150517999	150515222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_150515200_150518000
Isoform_151526_7	chr5	+	192	1	Antisense	novelGene_ENSMUSG00000029655.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATAAAAGTTGAACGCAAA	5593	False	NA	NA	False	NA	NA	NA	150572118	150572310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_150572100_150572300
Isoform_151528_890	chr18	-	172	1	Intergenic	novelGene_5268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	890	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	12133816	12133644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_12133600_12133800
Isoform_151529_4	chr5	+	4583	1	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	46	-70158	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTAACCTGCTGCTAAC	NA	False	NA	NA	False	NA	NA	NA	150597337	150601920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr5_+_150597300_150601900
Isoform_151530_8	chr5	+	188	1	Intergenic	novelGene_9173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACCTTTTAACAT	NA	False	NA	NA	False	NA	NA	NA	150613532	150613720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_150613500_150613700
Isoform_151534_3	chr5	-	220	1	Intergenic	novelGene_9175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150719063	150718843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_150718800_150719100
Isoform_151535_3	chr5	-	1492	1	Antisense	novelGene_ENSMUSG00000034021.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150720333	150718841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_150718800_150720300
Isoform_151537_5	chr5	+	278	1	Intergenic	novelGene_9176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACATAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	150871008	150871286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_150871000_150871300
Isoform_151538_13	chr5	-	152	1	Intergenic	novelGene_9177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	151205557	151205405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_151205400_151205600
Isoform_151549_8	chr5	+	175	1	Intergenic	novelGene_8391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATCCTTATCACT	NA	False	NA	NA	False	NA	NA	NA	28424225	28424400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_28424200_28424400
Isoform_151552_3	chr5	+	3827	1	Genic_Genomic	ENSMUSG00000048271.15	novel	NA	NA	NA	NA	4757	5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGAGTTTATTTTCTT	NA	False	NA	9	True	AATAAA	-21	NA	28620415	28624242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_28620400_28624200
Isoform_151553_4	chr5	+	857	1	Genic_Genomic	ENSMUSG00000048271.15	novel	NA	NA	NA	NA	7725	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAAGAGTTTATTTTC	NA	False	NA	7	True	AATAAA	-19	NA	28623383	28624240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_28623400_28624200
Isoform_151554_18	chr5	-	176	1	Intergenic	novelGene_8392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28860694	28860518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_28860500_28860700
Isoform_151555_10	chr5	+	3656	1	Intergenic	novelGene_8393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	8021	False	NA	NA	False	NA	NA	NA	29442728	29446384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_29442700_29446400
Isoform_151558_6	chr5	+	174	1	Intergenic	novelGene_8394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	29653430	29653604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_29653400_29653600
Isoform_151561_24	chr5	-	187	1	Intergenic	novelGene_8395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTTGAATATGG	NA	False	NA	NA	False	NA	NA	NA	29701647	29701460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_29701500_29701600
Isoform_151563_4	chr5	-	203	1	Intergenic	novelGene_8396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	577	False	NA	NA	False	NA	NA	NA	29794640	29794437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_29794400_29794600
Isoform_151566_8	chr5	+	181	1	Intergenic	novelGene_8397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGGAAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	29882647	29882828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_29882600_29882800
Isoform_151568_512	chr5	+	175	1	Intergenic	novelGene_8398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	512	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATACAGCCAG	NA	False	NA	NA	False	NA	NA	NA	29902754	29902929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_29902800_29902900
Isoform_151570_23	chr5	+	181	1	Intergenic	novelGene_8399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATGCAGCATGG	NA	False	NA	NA	False	NA	NA	NA	29904029	29904210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_29904000_29904200
Isoform_151571_76	chr5	+	173	1	Intergenic	novelGene_8400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29916185	29916358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_29916200_29916400
Isoform_151574_82	chr5	-	177	1	Intergenic	novelGene_8401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTGTAT	NA	False	NA	NA	False	NA	NA	NA	29933703	29933526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_29933500_29933700
Isoform_151576_4	chr5	-	176	1	Intergenic	novelGene_8402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTTAAAACAAAAAAAAA	8056	False	NA	NA	False	NA	NA	NA	30000784	30000608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_30000600_30000800
Isoform_151577_3	chr5	+	176	1	Intergenic	novelGene_8403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAACTTAGAACGTT	NA	False	NA	NA	False	NA	NA	NA	30011096	30011272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_30011100_30011300
Isoform_151579_19	chr5	+	195	1	Intergenic	novelGene_8404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCCACAGCAGCCATC	3571	False	NA	NA	False	NA	NA	NA	30147808	30148003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_30147800_30148000
Isoform_151583_4	chr5	+	179	1	Intergenic	novelGene_8405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTCAGCGGAAT	NA	False	NA	NA	False	NA	NA	NA	30293858	30294037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_30293900_30294000
Isoform_151585_3	chr5	-	261	1	Intergenic	novelGene_8406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACAAAAAGTAAGCG	NA	False	NA	NA	False	NA	NA	NA	30396702	30396441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_30396400_30396700
Isoform_151586_7	chr5	-	175	1	Intergenic	novelGene_8407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	30415064	30414889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_30414900_30415100
Isoform_151588_3	chr5	-	264	1	Intergenic	novelGene_8408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTAGCTCCCATTTTT	NA	False	NA	NA	False	GGGGCT	-10	NA	30663722	30663458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_30663500_30663700
Isoform_151590_4	chr5	+	166	1	Intergenic	novelGene_8409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGATAGGACTGGTGA	NA	False	NA	NA	False	NA	NA	NA	30835623	30835789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_30835600_30835800
Isoform_151592_3	chr5	+	158	1	Intergenic	novelGene_8410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAATATTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	30943698	30943856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_30943700_30943900
Isoform_151593_3	chr5	+	159	1	FSM	ENSMUSG00000106229.2	ENSMUST00000198244.2	2858	1	2679	20	2679	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATGAAAAAAGATT	5864	False	NA	NA	False	NA	NA	NA	30975642	30975801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_30975600_30975800
Isoform_151594_19	chr5	+	177	1	Intergenic	novelGene_8411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCAGTAA	NA	False	NA	NA	False	NA	NA	NA	30986980	30987157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_30987000_30987200
Isoform_151595_4	chr5	+	324	1	Intergenic	novelGene_8413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAGATGAAAGTGTC	NA	False	NA	NA	False	NA	NA	NA	31002242	31002566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31002200_31002600
Isoform_151596_8	chr5	+	175	1	Intergenic	novelGene_8412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAGAGCTAGCGGCGTT	NA	False	NA	NA	False	NA	NA	NA	31002242	31002417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31002200_31002400
Isoform_151597_9	chr5	-	4189	1	FSM	ENSMUSG00000044674.7	ENSMUST00000054294.7	4197	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTACATTTTTCTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	4808035	4803846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_4803800_4808000
Isoform_151600_3	chr5	+	3090	1	FSM	ENSMUSG00000107201.2	ENSMUST00000202893.2	2281	1	1294	-2103	1294	2103	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1094	False	NA	NA	False	NA	NA	NA	31055937	31059027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31055900_31059000
Isoform_151601_3	chr5	-	712	1	Intergenic	novelGene_8414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATAATATAAACAGTAAC	NA	False	NA	NA	False	AATAAA	-21	NA	31057793	31057081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_31057100_31057800
Isoform_151604_3	chr5	+	1231	1	Genic_Genomic	ENSMUSG00000006638.16	novel	NA	NA	NA	NA	-14	-3807	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAATCTAAAAT	NA	False	NA	NA	False	NA	NA	NA	31107395	31108626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_+_31107400_31108600
Isoform_151606_12	chr5	+	163	1	Intergenic	novelGene_8415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAAATAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	31142162	31142325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31142200_31142300
Isoform_151607_9	chr5	+	182	1	Intergenic	novelGene_8416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTC	NA	False	NA	NA	False	NA	NA	NA	31167350	31167532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31167400_31167500
Isoform_151609_21	chr5	+	199	1	Intergenic	novelGene_8417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTATGCCTACAAG	3176	False	NA	NA	False	NA	NA	NA	31183372	31183571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31183400_31183600
Isoform_151610_15	chr5	-	194	1	Intergenic	novelGene_8418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTTTGCAAAAATAAT	7714	False	NA	NA	False	NA	NA	NA	31185405	31185211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_31185200_31185400
Isoform_151615_6	chr5	+	172	1	Intergenic	novelGene_8419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATTTAATTAAATA	6175	False	NA	NA	False	NA	NA	NA	31258091	31258263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31258100_31258300
Isoform_151617_9	chr5	-	179	1	Intergenic	novelGene_8420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	31275711	31275532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_31275500_31275700
Isoform_151620_33	chr5	+	174	1	Intergenic	novelGene_8421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAATAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	31329127	31329301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31329100_31329300
Isoform_151621_30	chr5	+	176	1	Intergenic	novelGene_8422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	31346468	31346644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31346500_31346600
Isoform_151626_3	chr5	+	293	1	Intergenic	novelGene_8423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCAAAAAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	31374130	31374423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31374100_31374400
Isoform_151629_16	chr5	+	2120	1	FSM	ENSMUSG00000062761.8	ENSMUST00000201859.2	3522	1	8	1394	8	1182	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAAAAAAATAC	7199	False	NA	NA	False	NA	NA	NA	31609831	31611951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31609800_31612000
Isoform_151637_3	chr5	-	2517	1	Genic_Genomic	ENSMUSG00000107142.2	novel	NA	NA	NA	NA	-1199	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	723	False	NA	0	True	NA	NA	NA	31646491	31643974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_31644000_31646500
Isoform_151639_13	chr5	+	228	1	FSM	ENSMUSG00000029138.5	ENSMUST00000202441.2	2737	1	1140	1369	1021	-1369	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATTCAGTTCCTCCTCC	NA	False	NA	NA	False	NA	NA	NA	31644223	31644451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_31644200_31644500
Isoform_15164_1219	chr11	-	6171	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	40	308	-24	-4	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTAGAATTGCA	NA	False	NA	-11	True	AATAAA	-15	NA	86648351	86585484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
Isoform_151640_19	chr5	+	176	1	Intergenic	novelGene_8424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	31651061	31651237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_31651100_31651200
Isoform_151643_15	chr5	-	2562	1	Antisense	novelGene_ENSMUSG00000064037.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGGGCTGCTGCTCGG	NA	False	NA	NA	False	NA	NA	NA	31665658	31663096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_31663100_31665700
Isoform_151644_4	chr5	-	2597	1	Genic_Genomic	ENSMUSG00000107352.2_ENSMUSG00000107355.2	novel	NA	NA	NA	NA	-744	2375	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTAAAGAATCATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	31727160	31724563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_31724600_31727200
Isoform_151645_3	chr5	-	2616	1	Intergenic	novelGene_8425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31754178	31751562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_31751600_31754200
Isoform_151648_51	chr5	-	177	1	Intergenic	novelGene_8426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	31902805	31902628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_31902600_31902800
Isoform_151649_33	chr5	-	178	1	Intergenic	novelGene_8331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATTAGAAA	NA	False	NA	NA	False	NA	NA	NA	5751795	5751617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_5751600_5751800
Isoform_15165_565	chr11	-	6225	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	1	293	1	11	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAGTTTTAATTAAATAC	NA	False	NA	4	True	AATAAA	-30	NA	86648390	86585469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
Isoform_151665_58	chr5	+	181	1	Intergenic	novelGene_8427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGCATTTTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	32669904	32670085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32669900_32670100
Isoform_151666_14	chr5	+	195	1	Intergenic	novelGene_8428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAAAAAAAAAGCCTTACA	NA	False	NA	NA	False	NA	NA	NA	32694400	32694595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32694400_32694600
Isoform_151667_3	chr1	+	175	1	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	6169	False	NA	NA	False	NA	NA	NA	74722442	74722617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_74722400_74722600
Isoform_151668_3	chr5	+	1035	1	Intergenic	novelGene_8333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5797868	5798903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_5797900_5798900
Isoform_151669_3	chr5	+	191	1	Intergenic	novelGene_8430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAACAATTCCAG	4336	False	NA	NA	False	NA	NA	NA	32750871	32751062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32750900_32751100
Isoform_151672_67	chr5	+	178	1	Intergenic	novelGene_8431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATATTAATC	NA	False	NA	NA	False	AATAAA	-16	NA	32778779	32778957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32778800_32779000
Isoform_151673_3	chr5	-	176	1	Intergenic	novelGene_8432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAAATGTTCCAA	2343	False	NA	NA	False	NA	NA	NA	32783285	32783109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_32783100_32783300
Isoform_151674_3	chr5	-	176	1	Intergenic	novelGene_8433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCCTAATAGT	1319	False	NA	NA	False	NA	NA	NA	32784309	32784133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_32784100_32784300
Isoform_151676_6	chr5	-	4637	1	Antisense	novelGene_ENSMUSG00000014932.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAATCCTAACAAGTT	NA	False	NA	NA	False	ACTAAA	-14	NA	32799229	32794592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_-_32794600_32799200
Isoform_15168_27	chr11	-	6474	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	40	5	-24	-5	multi-exon	TRUE	canonical	3	813	junction_25	122.673691341487	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCATGGTATTTCTT	NA	False	NA	-5	True	AATAAA	-13	NA	86648351	86585181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
Isoform_151687_4	chr5	+	171	1	Intergenic	novelGene_8434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAATGGACT	7545	False	NA	NA	False	NA	NA	NA	32845646	32845817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32845600_32845800
Isoform_151690_41300	chr5	-	2105	1	FSM	ENSMUSG00000100801.2	ENSMUST00000117405.2	1941	1	-78	-86	-78	86	mono-exon	FALSE	NA	NA	NA	NA	NA	41300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	6	True	AATAAA	-20	NA	5833633	5831528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_5831500_5833600
Isoform_151718_5	chr5	+	402	1	Intergenic	novelGene_8435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTC	9004	False	NA	NA	False	NA	NA	NA	32918348	32918750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32918300_32918800
Isoform_151719_4	chr5	+	1801	1	Intergenic	novelGene_8436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGGAGACAGAAGCTCT	NA	False	NA	NA	False	NA	NA	NA	32927348	32929149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32927300_32929100
Isoform_151729_7	chr4	-	176	1	Intergenic	novelGene_7996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7819	False	NA	NA	False	NA	NA	NA	132631075	132630899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_132630900_132631100
Isoform_151731_23	chr5	+	176	1	Intergenic	novelGene_8437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	32964108	32964284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32964100_32964300
Isoform_151733_21	chr5	+	1852	1	Intergenic	novelGene_8439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	528	False	NA	NA	False	NA	NA	NA	32979671	32981523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32979700_32981500
Isoform_151735_27	chr5	+	1541	1	Antisense	novelGene_ENSMUSG00000054280.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33008736	33010277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_33008700_33010300
Isoform_151737_3	chr5	-	1769	1	Genic_Genomic	ENSMUSG00000054280.15	novel	NA	NA	NA	NA	-68	-16938	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAAACAAACCTTCC	6985	False	NA	NA	False	NA	NA	NA	33011668	33009899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_33009900_33011700
Isoform_151738_80	chr7	-	178	1	ISM	ENSMUSG00000015134.16	ENSMUST00000174209.8	1496	7	17891	10	-2696	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTAGACTCTG	NA	False	NA	NA	False	NA	NA	NA	66058446	66058268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_66058300_66058400
Isoform_151739_3	chr5	+	181	1	Intergenic	novelGene_8441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGATTTGATGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	33016862	33017043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_33016900_33017000
Isoform_15174_44	chr11	-	6362	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	-151	308	-151	-4	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTAGAATTGCA	NA	False	NA	-11	True	AATAAA	-15	NA	86648542	86585484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
Isoform_151740_11	chr5	-	2612	1	Intergenic	novelGene_8442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	33029398	33026786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_33026800_33029400
Isoform_151743_3	chr5	-	175	1	Intergenic	novelGene_8443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATAAAATCAG	NA	False	NA	NA	False	NA	NA	NA	33078402	33078227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_33078200_33078400
Isoform_151752_363	chr5	-	176	1	Intergenic	novelGene_8444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAATGCACTATC	NA	False	NA	-1	True	NA	NA	NA	33191146	33190970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_33191000_33191100
Isoform_151753_3	chr5	-	181	1	Intergenic	novelGene_8445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAGATCCAT	NA	False	NA	NA	False	NA	NA	NA	33254706	33254525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_33254500_33254700
Isoform_151754_145	chr5	-	216	1	Intergenic	novelGene_8446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGGTCTGCATAAGC	5884	False	NA	NA	False	NA	NA	NA	33269234	33269018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_33269000_33269200
Isoform_151755_4	chr5	-	2916	1	Intergenic	novelGene_8334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAATTGGT	NA	False	NA	NA	False	NA	NA	NA	7485441	7482525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_7482500_7485400
Isoform_151759_9	chr5	+	193	1	Intergenic	novelGene_8447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-43	NA	33356381	33356574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_33356400_33356600
Isoform_151760_30	chr5	+	179	1	Intergenic	novelGene_8448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	33439562	33439741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_33439600_33439700
Isoform_151762_92	chr2	-	180	1	Intergenic	novelGene_6907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181599768	181599588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_181599600_181599800
Isoform_151764_15	chr5	+	168	1	Intergenic	novelGene_8451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATAAACCAATGATC	NA	False	NA	NA	False	NA	NA	NA	33604725	33604893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_33604700_33604900
Isoform_151766_9	chr5	-	3418	1	Intergenic	novelGene_8452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGATGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	33692869	33689451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_33689500_33692900
Isoform_151768_9	chr5	+	175	1	Intergenic	novelGene_8453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATGACCAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	33740014	33740189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_33740000_33740200
Isoform_151774_6	chr5	+	176	1	Antisense	novelGene_ENSMUSG00000004642.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	6692	False	NA	NA	False	NA	NA	NA	33806274	33806450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr5_+_33806300_33806400
Isoform_151780_5	chr5	-	1870	1	Intergenic	novelGene_8454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33977685	33975815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_33975800_33977700
Isoform_151781_6	chr5	+	171	1	Intergenic	novelGene_8455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTTAAAAGAAAGTTTA	7132	False	NA	NA	False	NA	NA	NA	34008284	34008455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_34008300_34008500
Isoform_151786_13	chr6	-	5182	2	FSM	ENSMUSG00000047735.15	ENSMUST00000120087.6	5330	2	145	3	145	-3	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACTTTTCTAAATTAT	3	True	NA	NA	False	AATAAA	-17	NA	3399427	3372259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_3377282_3399267
Isoform_151787_3	chr6	-	5300	2	FSM	ENSMUSG00000047735.15	ENSMUST00000120087.6	5330	2	23	7	23	-7	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATGACTTTTCTAAA	10	True	NA	NA	False	AATAAA	-13	NA	3399549	3372263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_3377282_3399267
Isoform_151788_134	chr6	-	1481	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	31	4	-11	-4	multi-exon	FALSE	canonical	3	308	junction_1	40.3016404408335	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTGTTGTGTGTTCTTG	-4	True	NA	-4	True	ATTAAA	-18	NA	4086941	4076902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
Isoform_151790_6	chr6	-	3924	3	NIC	ENSMUSG00000032757.7	novel	1516	4	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	308	junction_1	46	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTGTGTTCTTGGCA	-4	True	NA	-1	True	ATTAAA	-21	NA	4086941	4076899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_4078037_4079960_4082583_4086776
Isoform_151791_17	chr6	-	1604	11	FSM	ENSMUSG00000004631.16	ENSMUST00000115579.8	1696	11	89	3	1	1	multi-exon	FALSE	canonical	3	7	junction_4	4.92848861214064	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGTGGTAAAATTTCT	-16	True	NA	NA	False	AATAAA	-33	NA	4747115	4674352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
Isoform_151793_4	chr6	-	1125	9	FSM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	53	659	0	-659	multi-exon	FALSE	canonical	3	12	junction_4	13.4350288425444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGGAACTGTAATTATT	19	True	NA	NA	False	AGTAAA	-17	NA	5256233	5221510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5246277_5246334_5254515_5254587_5256152
Isoform_151794_3	chr6	-	1805	9	FSM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	33	-1	-18	1	multi-exon	FALSE	canonical	3	12	junction_4	13.4350288425444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGAAAAAAAATATATGC	-1	True	NA	NA	False	AATAAA	-44	NA	5256253	5220850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5246277_5246334_5254515_5254587_5256152
Isoform_151795_5	chr6	-	845	7	NIC	ENSMUSG00000029759.10	novel	1837	9	NA	NA	-11	-659	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	15.5715195861619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGGAACTGTAATTATT	6	True	NA	NA	False	AGTAAA	-17	NA	5256246	5221510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5246277_5246334_5254515_5254587_5256152
Isoform_151796_3	chr6	-	1000	5	FSM	ENSMUSG00000029759.10	ENSMUST00000156848.8	921	5	-28	-51	-7	51	multi-exon	FALSE	canonical	3	13	junction_1	12.871965661856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTAAGTGTGCTGACTC	10	True	NA	NA	False	AATAAA	-37	NA	5256242	5236381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_5236999_5240812_5240979_5246277_5246334_5254515_5254587_5256152
Isoform_151797_3	chr6	-	766	3	ISM	ENSMUSG00000029759.10	ENSMUST00000156848.8	921	5	-23	9291	-2	-8848	5prime_fragment	FALSE	canonical	3	44	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAGCAAAGAAAG	15	True	NA	NA	False	TTTAAA	-36	NA	5256237	5245723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_5246334_5254515_5254587_5256152
Isoform_151798_7	chr6	-	1836	9	FSM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	94	479	-31	-479	multi-exon	FALSE	canonical	2	9	junction_7	2.57087047515039	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTATTTGTTTGTTTGTT	-22	True	NA	NA	False	AATAAA	-26	NA	5298361	5264625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277871_5277928_5289012_5289084_5298211
Isoform_151799_16	chr6	-	3537	11	FSM	ENSMUSG00000019577.7	ENSMUST00000019721.7	3484	11	-51	-2	-51	2	multi-exon	FALSE	canonical	2	10	junction_7	4.42831796509691	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTCTTATAAAATTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	5496360	5483348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_5485593_5486677_5486792_5487063_5487175_5487378_5487478_5489134_5489212_5491069_5491148_5491590_5491678_5491829_5492015_5492705_5492778_5494889_5495032_5496032
Isoform_15180_163	chr11	-	2794	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	114	905	114	-905	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTTCAAGGCCTTCTT	8641	False	NA	-7	True	ATTAAA	-15	NA	86698458	86660576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
Isoform_151800_10	chr6	-	3766	11	FSM	ENSMUSG00000019577.7	ENSMUST00000019721.7	3484	11	-283	1	-283	-1	multi-exon	FALSE	canonical	2	10	junction_7	4.42831796509691	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGGTCTTATAAAATT	NA	False	NA	NA	False	AATAAA	-18	NA	5496592	5483351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_5485593_5486677_5486792_5487063_5487175_5487378_5487478_5489134_5489212_5491069_5491148_5491590_5491678_5491829_5492015_5492705_5492778_5494889_5495032_5496032
Isoform_151807_229	chr6	-	3090	18	FSM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	-23	0	-23	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	-3	True	NA	-3	True	AATAAA	-16	NA	6217141	6041217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_151809_18	chr6	-	3179	18	FSM	ENSMUSG00000015112.16	ENSMUST00000188414.4	3121	18	-57	-1	-57	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	NA	False	NA	-3	True	AATAAA	-16	NA	6217230	6041217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_15181_177	chr11	-	2767	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	141	905	141	-905	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTTCAAGGCCTTCTT	8668	False	NA	-7	True	ATTAAA	-15	NA	86698431	86660576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
Isoform_15182_29	chr11	-	3699	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	114	0	114	0	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGTATGTGGATTTTT	8641	False	NA	-8	True	ATTAAA	-7	NA	86698458	86659671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
Isoform_151822_888	chr6	-	3087	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_13	48.4240210344906	888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	-3	True	NA	-3	True	AATAAA	-16	NA	6217141	6041217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_151823_47	chr6	-	3148	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_13	48.4240210344906	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	NA	False	NA	-3	True	AATAAA	-16	NA	6217202	6041217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_151832_47	chr6	-	2944	17	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	159.387107383251	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	-3	True	NA	-3	True	AATAAA	-16	NA	6217141	6041217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
Isoform_151844_1109	chr6	-	454	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	22	996	22	-996	multi-exon	FALSE	canonical	3	3186	junction_2	110.5	1109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTTGGTTCAGATGT	-3	True	NA	-14	True	AATAAA	-12	NA	6578636	6558289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_6558492_6560407_6560502_6578478
Isoform_15188_141	chr11	-	4859	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	-13	1	-13	-1	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGGGAGAATGTCTGT	NA	False	NA	-9	True	AATAAA	-15	NA	86884546	86827251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
Isoform_151889_2547	chr6	-	2000	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	-1	2	-1	-2	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	2547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTCCTGGTTGTGGGT	1566	False	NA	-11	True	AATAAA	-15	NA	7693255	7675170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
Isoform_151890_21238	chr6	-	1960	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	45	-4	45	4	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	21238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	5	True	NA	-5	True	AATAAA	-21	NA	7693209	7675164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
Isoform_151892_1376	chr6	-	2390	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	45	-434	45	434	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTTCCATAAAACTTC	5	True	NA	-25	True	NA	NA	NA	7693209	7674734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
Isoform_15191_9	chr11	-	4911	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	-67	3	-67	-3	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTTGGGAGAATGTCT	NA	False	NA	-11	True	AATAAA	-13	NA	86884600	86827253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
Isoform_15194_128	chr11	-	2334	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	2	0	2	0	multi-exon	FALSE	canonical	3	37	junction_6	8.73053390247253	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGATTCCAGTGTGT	NA	False	NA	-8	True	AATAAA	-39	NA	86964886	86924692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
Isoform_15195_4	chr11	-	2461	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	-50	-75	-50	75	multi-exon	FALSE	canonical	3	37	junction_6	8.73053390247253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTCTCACTATTGTGCA	NA	False	NA	67	True	AATAAA	-13	NA	86964938	86924617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
Isoform_151953_501	chr6	-	610	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	60	0	27	0	multi-exon	FALSE	canonical	3	1410	junction_2	59.4474557908074	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCAATTGTTTT	12	True	NA	-11	True	AATAAA	-14	NA	8259113	8255935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
Isoform_151954_176	chr6	-	648	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	22	0	-11	0	multi-exon	FALSE	canonical	3	1410	junction_2	59.4474557908074	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCAATTGTTTT	-26	True	NA	-11	True	AATAAA	-14	NA	8259151	8255935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
Isoform_151958_80	chr6	-	1726	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	349	0	-12	0	multi-exon	FALSE	canonical	3	58	junction_8	7.8401183423021	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCACTCCTGTTTGGT	-1	True	NA	-1	True	AATAAA	-35	NA	8778135	8630526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
Isoform_151959_6	chr6	-	1842	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	229	4	-101	-4	multi-exon	FALSE	canonical	3	58	junction_8	7.8401183423021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTATTCACTCCTGTT	289	False	NA	-5	True	AATAAA	-31	NA	8778255	8630530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
Isoform_151964_3371	chr6	-	496	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	34	80	1	0	multi-exon	FALSE	canonical	3	8511	junction_2	453.262494465281	3371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	3	True	NA	-11	True	AATAAA	-15	NA	11907448	11900370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
Isoform_151971_3	chr6	-	4108	24	NIC	ENSMUSG00000032625.15	novel	10998	28	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.47313689966065	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATGGACTCATTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	12555121	12320798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_12321117_12321887_12321971_12324595_12324692_12327492_12327667_12330936_12331112_12331543_12331690_12331927_12332046_12337250_12337367_12338579_12338725_12343111_12343266_12348195_12348330_12351983_12352163_12379391_12379656_12381219_12381415_12396554_12396659_12397837_12397971_12405107_12405224_12408801_12409037_12418243_12418439_12468787_12469001_12471040_12471197_12500985_12501168_12503914_12504164_12554893
Isoform_151972_9	chr6	-	4252	7	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	6	-607	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	106.573527044321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-7	True	NA	NA	False	ATTAAA	-19	NA	13608037	13581292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605959_13606922_13607084_13607828
Isoform_151976_398	chr6	-	3900	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	77	610	-4	-610	multi-exon	FALSE	canonical	3	155	junction_4	32.9194091684526	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTTTGCTTTTAGAG	8	True	NA	NA	False	ATTAAA	-16	NA	13608022	13581295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
Isoform_151979_9	chr6	-	4526	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	61	0	5	0	multi-exon	TRUE	canonical	3	155	junction_4	32.9194091684526	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTGTCTCAGACTCAG	-8	True	NA	NA	False	AATAAA	-26	NA	13608038	13580685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
Isoform_151980_36	chr6	-	4088	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	75	424	2	-424	multi-exon	FALSE	canonical	3	155	junction_4	32.9194091684526	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTGTGTGCATCTTG	6	True	NA	NA	False	AATAAA	-3	NA	13608024	13581109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
Isoform_151981_17	chr6	-	2647	4	FSM	ENSMUSG00000029569.10	ENSMUST00000149123.3	3337	4	79	611	-2	-611	multi-exon	FALSE	canonical	3	13	junction_3	103.721850264167	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCTTTGCTTTTAGA	10	True	NA	NA	False	ATTAAA	-15	NA	13608020	13581296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13607828
Isoform_151986_33	chr6	-	4079	6	NNC	ENSMUSG00000042742.8	novel	4143	5	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.2495714250728	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTTGTCTGTTACT	16	True	NA	-3	True	ATTAAA	-16	NA	13677936	13625675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_13625882_13625912_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
Isoform_151987_26	chr6	-	4124	6	NNC	ENSMUSG00000042742.8	novel	4143	5	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.2495714250728	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTTGTCTGTTACT	NA	False	NA	-3	True	ATTAAA	-16	NA	13677978	13625675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_13625886_13625913_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
Isoform_151992_40	chr6	-	1060	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	53	2064	0	1	multi-exon	FALSE	canonical	3	64	junction_2	22	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTTTTGGTCTGCTT	1	True	NA	NA	False	AATACA	-23	NA	13871464	13869797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_13870740_13871054_13871146_13871437
Isoform_151993_11	chr6	-	1750	13	FSM	ENSMUSG00000010796.12	ENSMUST00000010940.11	1736	13	-15	1	-11	-1	multi-exon	FALSE	canonical	1	1	junction_4	5.42307313450798	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTGTGCTCATTTGT	2	True	NA	NA	False	AATAAA	-23	NA	18109071	18050963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_18051403_18054526_18054641_18055433_18055540_18071963_18072074_18073760_18073818_18074824_18074901_18075759_18075885_18076503_18076639_18077151_18077264_18103498_18103611_18104774_18104898_18108401_18108502_18108930
Isoform_151996_3	chr6	-	5884	23	FSM	ENSMUSG00000000416.17	ENSMUST00000090601.12	5183	23	-43	-658	-21	2	multi-exon	FALSE	canonical	0	0	junction_21	3.78366432211941	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGTGTCTTATAAATAAA	NA	False	NA	NA	False	AATAAA	-16	NA	18514863	18366561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_18367616_18374522_18374622_18375935_18376069_18378365_18378430_18380461_18380639_18380966_18381173_18382744_18382924_18388026_18388215_18389081_18389235_18397331_18397432_18397516_18397604_18405182_18405263_18406454_18406551_18408480_18408757_18414180_18414299_18420764_18421017_18423829_18423981_18426034_18426135_18427437_18427642_18433818_18435446_18448246_18448469_18501947_18502056_18514653
Isoform_151997_8	chr6	-	4053	4	FSM	ENSMUSG00000000416.17	ENSMUST00000139557.2	3982	4	-48	-23	-4	23	multi-exon	FALSE	canonical	0	0	junction_2	2.62466929133727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAAGGAAAAA	-15	True	NA	NA	False	ACTAAA	-38	NA	18514846	18431915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_18435446_18448246_18448469_18501947_18502056_18514653
Isoform_151999_187	chr6	-	2800	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	25	1	25	-1	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTAGTAGTTGCAGTGA	-19	True	NA	-1	True	ATTAAA	-21	NA	22356140	22306519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
Isoform_152000_64	chr6	-	2839	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	-15	2	-15	-2	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGTAGTAGTTGCAGTG	3	True	NA	-2	True	ATTAAA	-20	NA	22356180	22306520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
Isoform_152001_205	chr6	-	1439	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	37	1350	-31	12	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCACAACAGTTTTTT	-7	True	NA	-9	True	AATAAA	-33	NA	22356128	22307868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
Isoform_152002_72	chr6	-	1484	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	-15	1357	-15	5	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTGTGAAAAGCACAACA	3	True	NA	-16	True	AATAAA	-26	NA	22356180	22307875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
Isoform_152009_7	chr6	-	2782	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	132.259924013285	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	-30	True	NA	0	True	ATTAAA	-22	NA	22356151	22306518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339271_22339377_22343264_22343319_22355993
Isoform_152011_3	chr6	-	3400	24	FSM	ENSMUSG00000029695.14	ENSMUST00000031707.14	3701	24	-29	330	-29	-330	multi-exon	TRUE	canonical	0	0	junction_6	3.81024387829681	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTCTTGAGTTTTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	23133014	23072501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_23073090_23074526_23074704_23075160_23075250_23075739_23075856_23077077_23077174_23078826_23078995_23091197_23091339_23092263_23092373_23092462_23092574_23093894_23094022_23094188_23094311_23096824_23096893_23097141_23097202_23107138_23107251_23107615_23107739_23109425_23109575_23113424_23113553_23113674_23113754_23114839_23114987_23115086_23115155_23118668_23118754_23120875_23121053_23122511_23122737_23132879
Isoform_152015_887	chr6	-	418	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	458	-1	15	1	multi-exon	FALSE	canonical	3	2597	junction_4	429.359042643799	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCCATGTTATTGA	11	True	NA	-30	True	ATTAAA	-28	NA	24527554	24518663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
Isoform_152017_18	chr6	-	302	4	FSM	ENSMUSG00000023089.13	ENSMUST00000118558.5	315	4	14	-1	14	1	multi-exon	FALSE	canonical	3	83	junction_2	1436.47492920072	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCCATGTTATTGA	10	True	NA	-30	True	ATTAAA	-28	NA	24527555	24518663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_24518824_24519190_24519257_24527271_24527317_24527524
Isoform_152023_306	chr6	-	4320	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	22	10	1	-10	multi-exon	FALSE	canonical	3	160	junction_7	20.1893536300695	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATAAAATAGTGTGTCT	13	True	NA	NA	False	AATAAA	-17	NA	24664986	24613813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
Isoform_152024_37	chr6	-	4425	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	-83	10	-83	-10	multi-exon	FALSE	canonical	3	160	junction_7	20.1893536300695	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATAAAATAGTGTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24665091	24613813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
Isoform_152039_342	chr6	-	2935	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	8	208	-2	-208	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGTGTCTGTGTGT	8	True	NA	-6	True	AATAAA	-14	NA	25809217	25743943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
Isoform_152040_17	chr6	-	2962	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	-19	208	1	-208	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGTGTCTGTGTGT	6	False	NA	-6	True	AATAAA	-14	NA	25809244	25743943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
Isoform_152041_8	chr6	-	3117	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	8	26	-2	-26	multi-exon	TRUE	canonical	3	94	junction_8	16.939542404853	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGTTTGATGAATTTTC	8	True	NA	NA	False	AAAAAG	-15	NA	25809217	25743761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
Isoform_152044_48	chr6	-	2889	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	-2	-207	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	31.693847983481	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTCTGTGTGTG	8	True	NA	-5	True	AATAAA	-15	NA	25809217	25743942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
Isoform_152046_7	chr6	-	2664	16	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	-2	-205	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	36.3894978744631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTCTGTGTGTGTG	8	True	NA	-3	True	AATAAA	-17	NA	25809217	25743940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25805873_25805941_25809173
Isoform_152048_6	chr6	-	2807	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	2	-207	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	35.6105233744184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTCTGTGTGTG	6	True	NA	-5	True	AATAAA	-15	NA	25809219	25743942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
Isoform_152051_10	chr6	-	3620	6	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	11.0381157812373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGCTAAATGTGCTTCA	4	True	NA	NA	False	AATAAA	-16	NA	28261921	28240237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
Isoform_152053_5	chr6	-	2959	5	FSM	ENSMUSG00000039841.15	ENSMUST00000155494.2	703	5	-6	-2250	-6	-786	multi-exon	FALSE	canonical	3	22	junction_4	12.1937483982572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGTTAGTATTATTCAG	-12	True	NA	NA	False	AATAAA	-20	NA	28261937	28242233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
Isoform_152054_103	chr6	-	4053	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	9	588	9	-588	multi-exon	FALSE	canonical	3	46	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTTCTTAATGGTG	-4	True	NA	0	True	ATTAAA	-15	NA	28421714	28416677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_28419300_28420283
Isoform_152055_5	chr6	-	4640	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	9	1	9	-1	multi-exon	FALSE	canonical	3	46	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTAACTCTTGTTTTTA	-4	True	NA	NA	False	AATAAA	-15	NA	28421714	28416090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_28419300_28420283
Isoform_152056_9	chr6	-	4134	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	5	511	5	-511	multi-exon	FALSE	canonical	3	46	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATATAGTTCCTTATAT	-8	True	NA	77	True	AATAAA	-18	NA	28421718	28416600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_28419300_28420283
Isoform_15206_35	chr11	-	3894	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-70	0	-70	0	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCCAGAGTTCATGTTG	NA	False	NA	-13	True	ATTAAA	-16	NA	86999604	86979978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
Isoform_152065_241	chr6	-	2687	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	334	1444	334	122	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAACCTTTTTAACATTT	9	True	NA	-21	True	AATATA	-27	NA	29164671	29125018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
Isoform_152066_118	chr6	-	4134	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	332	-1	332	1	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	7	True	NA	-3	True	NA	NA	NA	29164673	29123573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
Isoform_152074_10	chr6	-	3514	5	FSM	ENSMUSG00000079654.4	ENSMUST00000159200.2	3411	5	-102	-1	-102	1	multi-exon	FALSE	canonical	3	12	junction_2	1.4790199457749	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTTCTGACCTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	29179685	29169229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29179455
Isoform_152075_7	chr6	-	3686	5	NNC	ENSMUSG00000079654.4	novel	3411	5	NA	NA	160	1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	5.1234753829798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTTCTGACCTTCTTG	230	False	NA	NA	False	AATAAA	-15	NA	29179423	29169229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29179021
Isoform_152079_299	chr6	-	2391	14	FSM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	42	4	-6	-3	multi-exon	TRUE	canonical	1	70	junction_10	46.9877234375763	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	11	True	NA	-5	True	AATAAA	-15	NA	29212254	29200439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
Isoform_152080_156	chr6	-	2541	15	FSM	ENSMUSG00000003500.14	ENSMUST00000159124.8	2600	15	55	4	22	-3	multi-exon	FALSE	canonical	1	64	junction_14	59.8544152123146	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	10	True	NA	-5	True	AATAAA	-15	NA	29216308	29200439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
Isoform_152081_99	chr6	-	2553	15	FSM	ENSMUSG00000003500.14	ENSMUST00000162099.8	2580	15	24	3	13	-3	multi-exon	FALSE	canonical	1	42	junction_14	63.7043554080817	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	1	True	NA	-5	True	AATAAA	-15	NA	29216317	29200439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212170_29216070
Isoform_152083_3	chr6	-	4894	38	FSM	ENSMUSG00000059022.16	ENSMUST00000101614.10	4885	38	-11	2	-9	-2	multi-exon	TRUE	canonical	0	0	junction_5	1.92367131343505	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGTGTAC	0	True	NA	NA	False	AATAAA	-16	NA	29507960	29482037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29482462_29482632_29482940_29483928_29484094_29484613_29484716_29484809_29484922_29485001_29485175_29485416_29485560_29487179_29487280_29487495_29487576_29489031_29489153_29490064_29490148_29490393_29490568_29491663_29491758_29491843_29491927_29492053_29492145_29492383_29492470_29493187_29493365_29495756_29495928_29496159_29496349_29496429_29496524_29496618_29496702_29496800_29496975_29497551_29497646_29497720_29497828_29497903_29498057_29498275_29498358_29498427_29498514_29498785_29498880_29498955_29499036_29499123_29499218_29501200_29501290_29502288_29502383_29502583_29502667_29502776_29502874_29504231_29504309_29504397_29504567_29505636_29505801_29507855
Isoform_1521_36	chr10	-	3094	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	11	junction_2	37	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	4337483	4317074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_4319852_4324569_4324755_4337351
Isoform_152112_24	chr6	-	4140	24	FSM	ENSMUSG00000012535.15	ENSMUST00000170350.8	3590	24	194	-744	-4	0	multi-exon	FALSE	canonical	3	27	junction_23	180.197874854504	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	9	True	NA	-2	True	TTTAAA	-5	NA	29609616	29540825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29609364
Isoform_152116_233	chr6	-	4213	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	38	0	-30	0	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	-7	True	NA	-2	True	TTTAAA	-5	NA	29609848	29540825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
Isoform_152119_427	chr6	-	3978	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	273	0	-1	0	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	12	True	NA	-2	True	TTTAAA	-5	NA	29609613	29540825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
Isoform_15212_165	chr11	-	2008	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	27	1909	10	37	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTGTATATGTATCTG	NA	False	NA	-1	True	AATAAA	-19	NA	87295322	87269379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
Isoform_15214_13	chr11	-	3396	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	27	521	10	-521	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTGTGTATACATCT	NA	False	NA	NA	False	NA	NA	NA	87295322	87267991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
Isoform_152140_563	chr6	-	2988	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	-8	1677	-8	-1677	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTTTGATATTGATGG	-5	True	NA	-2	True	AATAAA	-16	NA	30304546	30212964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
Isoform_152141_202	chr6	-	4660	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	-8	5	-8	-5	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGGCTGAACTTGATC	-5	True	NA	-7	True	AATAAA	-17	NA	30304546	30211292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
Isoform_152161_1647	chr6	-	1806	10	FSM	ENSMUSG00000039130.19	ENSMUST00000080812.14	1824	10	14	4	1	0	multi-exon	FALSE	canonical	1	382	junction_8	221.210865270177	1647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGCTGCTAGAGAATTG	5	True	NA	-11	True	AATAAA	-14	NA	30391008	30366382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
Isoform_15217_13	chr11	-	1735	6	ISM	ENSMUSG00000052234.3	ENSMUST00000049768.4	2689	13	5264	0	1496	0	3prime_fragment	FALSE	canonical	2	6	junction_4	6.99714227381436	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCCGCTGTCTCTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	87761098	87754825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_87755231_87755520_87755734_87756230_87756469_87759376_87759548_87760072_87760329_87760646
Isoform_15218_13	chr11	-	3940	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	-3491	1738	30	-1108	multi-exon	FALSE	canonical	3	631	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87878329	87872088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_87872397_87874697
Isoform_152181_593	chr6	-	3400	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	79	6	0	-6	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCCTTGGTGAAATCA	44	False	NA	-15	True	AATAAA	-13	NA	30509703	30481232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
Isoform_152182_1111	chr6	-	2219	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	79	1187	0	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	44	False	NA	-18	True	ATTAAA	-16	NA	30509703	30482413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
Isoform_152185_27	chr6	-	2323	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	-25	1187	-25	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	NA	False	NA	-18	True	ATTAAA	-16	NA	30509807	30482413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
Isoform_15219_326	chr11	-	2436	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	32	8	32	-8	multi-exon	FALSE	canonical	3	615	junction_2	8	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGAGCTGTTGGGGTT	NA	False	NA	-8	True	ATTAAA	-14	NA	87878327	87870358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_87872397_87874697_87874837_87878068
Isoform_152190_47	chr6	-	3839	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	79	-433	0	2	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGTGTGCAGACTC	44	False	NA	NA	False	AATATA	-26	NA	30509703	30480793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
Isoform_152204_3	chr6	-	3534	12	NNC	ENSMUSG00000029790.17	novel	3522	12	NA	NA	-5	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	40.2629785040368	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCGTTTGCTATTAAT	3	True	NA	-1	True	ATTAAA	-15	NA	30693704	30653456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30661721_30661855_30666265_30666336_30667379_30667441_30671321_30671370_30680129_30680194_30693635
Isoform_152206_11	chr6	-	1255	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	-11	2203	-11	-128	multi-exon	FALSE	canonical	3	75	junction_8	9.18095855561934	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCTCAGCGCTCCCAAC	NA	False	NA	-5	True	AATAAA	-17	NA	30693759	30655658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
Isoform_152208_56	chr6	-	3418	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	27	2	-22	0	multi-exon	FALSE	canonical	3	75	junction_8	9.18095855561934	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTCGTTTGCTATTAA	-14	True	NA	-2	True	ATTAAA	-14	NA	30693721	30653457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
Isoform_152211_3	chr6	-	3373	10	NIC	ENSMUSG00000029790.17	novel	3447	11	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	29.8295569718325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCGTTTGCTATTAAT	-16	True	NA	-1	True	ATTAAA	-15	NA	30693723	30653456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30680129_30680194_30693635
Isoform_152212_4	chr6	-	488	3	FSM	ENSMUSG00000029790.17	ENSMUST00000115130.3	485	3	-8	5	-8	-5	multi-exon	FALSE	canonical	2	5	junction_1	51	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGTTTATTCCAGACA	0	True	NA	NA	False	NA	NA	NA	30693707	30679091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30679444_30680129_30680194_30693635
Isoform_152213_11	chr6	-	3120	24	FSM	ENSMUSG00000025607.16	ENSMUST00000166192.7	3155	24	42	-7	-4	7	multi-exon	FALSE	canonical	2	9	junction_2	47.3145369461355	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTATACTTGAAATT	NA	False	NA	-7	True	AATAAA	-22	NA	30873687	30748403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30748987_30749404_30749501_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
Isoform_152221_481	chr6	-	3122	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-12	851	-3	7	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTATACTTGAAATT	NA	False	NA	-7	True	AATAAA	-22	NA	30873686	30748403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
Isoform_152222_31	chr6	-	3974	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-12	-1	-3	1	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTGTTATTATGTTT	NA	False	NA	0	True	AATAAA	-17	NA	30873686	30747551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
Isoform_152225_7	chr6	-	2722	20	NIC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	-1	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	50.8550708105575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTATACTTGAAATT	NA	False	NA	-7	True	AATAAA	-22	NA	30873700	30748403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
Isoform_152227_7	chr6	-	2018	14	ISM	ENSMUSG00000025607.16	ENSMUST00000166192.7	3155	24	42	43960	-4	8267	5prime_fragment	FALSE	canonical	3	177	junction_5	22.345326345065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTCTTGTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	30873687	30792370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
Isoform_152228_77	chr6	-	5319	8	FSM	ENSMUSG00000025608.10	ENSMUST00000026698.8	5379	8	52	8	52	-8	multi-exon	FALSE	canonical	3	33	junction_2	7.96164273891016	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGGTTCAGGCCCTAG	NA	False	NA	-7	True	AATAAA	-13	NA	31540864	31496430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
Isoform_15223_15	chr11	-	2394	3	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44257	-7	intron_retention	FALSE	canonical	3	52	junction_2	289.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	-7	True	ATTAAA	-15	NA	87922616	87870357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_87872397_87874697_87874837_87922400
Isoform_152231_5	chr6	-	2687	8	FSM	ENSMUSG00000025608.10	ENSMUST00000026698.8	5379	8	-7	2699	-7	805	multi-exon	FALSE	canonical	3	33	junction_2	7.96164273891016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTCCTCTGGCCGTCT	NA	False	NA	-8	True	NA	NA	NA	31540923	31499121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
Isoform_152237_908	chr6	-	1525	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	16	9	-7	-2	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGCATTTTCTGACTA	NA	False	NA	-19	True	AATAAA	-16	NA	33037179	32769160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
Isoform_15224_9	chr11	-	2449	3	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44312	-7	intron_retention	FALSE	canonical	3	52	junction_2	289.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	-7	True	ATTAAA	-15	NA	87922671	87870357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_87872397_87874697_87874837_87922400
Isoform_152248_18	chr6	-	1399	6	FSM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	-37	1	6	-1	multi-exon	FALSE	canonical	3	834	junction_1	31.2089730686545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGAATTATTAGTTTCT	NA	False	NA	-13	True	AATAAA	-15	NA	33037189	32828378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
Isoform_152249_68	chr6	-	3761	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	125	2367	-16	976	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGAGCATATCGTTTG	NA	False	NA	-5	True	ATTAAA	-13	NA	34153921	34132681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
Isoform_152251_313	chr6	-	3622	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	136	2495	-5	848	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	-24	True	TATAAA	-19	NA	34153910	34132809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
Isoform_152252_16	chr6	-	6132	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	119	2	-22	-2	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTCCAATCACCAT	NA	False	NA	NA	False	AATAAA	-16	NA	34153927	34130316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
Isoform_152253_51	chr6	-	3655	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	103	2495	-38	848	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	-24	True	TATAAA	-19	NA	34153943	34132809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
Isoform_15226_16	chr11	-	2631	4	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44313	-7	intron_retention	FALSE	canonical	3	7	junction_2	286.479008344804	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	-7	True	ATTAAA	-15	NA	87922672	87870357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_87872397_87874697_87874837_87892657_87892839_87922400
Isoform_152266_9	chr6	-	3591	9	NIC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	-26	846	combination_of_known_splicesites	TRUE	canonical	1	2	junction_6	73.4536418430019	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTGTTTGTTTGTT	NA	False	NA	-26	True	TATAAA	-17	NA	34153931	34132811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34144559_34144663_34147395_34147510_34153712
Isoform_152271_919	chr6	-	1350	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	36	1	-1	-1	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTGGTCCGTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	34294377	34280869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
Isoform_152272_295	chr6	-	1385	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	1	1	1	-1	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTGGTCCGTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	34294412	34280869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
Isoform_152275_3	chr6	-	1564	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115006.2	1501	4	-55	-8	-4	8	multi-exon	FALSE	canonical	1	2	junction_1	8.9566858950296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGACTATTCAATCCTGT	7593	False	NA	-12	True	NA	NA	NA	34854999	34850621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34851631_34852390_34852548_34853473_34853707_34854834
Isoform_152276_18	chr6	-	1500	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115007.9	3326	4	-13	1839	-13	16	multi-exon	FALSE	canonical	3	11	junction_1	4.92160768674447	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATCCTGTTCACCTTC	7584	False	NA	-4	True	NA	NA	NA	34855008	34850613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34851631_34852471_34852548_34853473_34853707_34854834
Isoform_152277_7	chr6	-	2323	3	NIC	ENSMUSG00000046806.14	novel	3326	4	NA	NA	0	11	intron_retention	FALSE	canonical	3	18	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTATTCAATCCTGTTCA	7597	False	NA	-9	True	NA	NA	NA	34854995	34850618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_34852548_34853473_34853707_34854834
Isoform_152279_16	chr6	-	2769	17	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	2	8	junction_15	24.2821951231762	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5809	False	NA	-1	True	NA	NA	NA	34887778	34857360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_34857585_34857615_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886611_34886763_34887631
Isoform_152281_205	chr6	-	2643	15	FSM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	39	0	-1	0	multi-exon	FALSE	canonical	2	55	junction_12	11.4653426304081	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5815	False	NA	-1	True	NA	NA	NA	34887772	34857360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
Isoform_152282_58	chr6	-	2686	15	FSM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	-4	0	-4	0	multi-exon	FALSE	canonical	2	55	junction_12	11.4653426304081	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5772	False	NA	-1	True	NA	NA	NA	34887815	34857360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
Isoform_152283_4	chr6	-	4988	15	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.2826234120323	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5809	False	NA	-1	True	NA	NA	NA	34887778	34857360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34870776_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
Isoform_152284_23	chr6	-	4421	7	ISM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	39	12405	-1	11836	5prime_fragment	FALSE	canonical	2	55	junction_4	9.69106117340442	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCCGTGGTGTTTCAT	5815	False	NA	-1	True	NA	NA	NA	34887772	34869765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
Isoform_152285_21	chr6	-	2743	12	FSM	ENSMUSG00000029847.14	ENSMUST00000201355.4	2003	12	-109	-631	-109	-26	multi-exon	FALSE	canonical	2	5	junction_7	2.56808125305919	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	34965448	34922238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34923272_34925142_34925239_34925332_34925442_34925739_34925905_34930699_34930954_34931904_34932062_34932804_34932926_34933811_34933994_34936389_34936550_34953960_34954119_34955843_34955991_34965287
Isoform_152287_5	chr6	-	2810	12	FSM	ENSMUSG00000029847.14	ENSMUST00000201355.4	2003	12	-176	-631	-176	-26	multi-exon	FALSE	canonical	2	5	junction_7	2.56808125305919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	34965515	34922238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_34923272_34925142_34925239_34925332_34925442_34925739_34925905_34930699_34930954_34931904_34932062_34932804_34932926_34933811_34933994_34936389_34936550_34953960_34954119_34955843_34955991_34965287
Isoform_152288_29	chr6	-	3502	12	NIC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	55.9338452220327	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGTGAGTCTTGTT	7666	False	NA	-3	True	AATAAA	-19	NA	35110639	34999000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_152289_162	chr6	-	3493	12	FSM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	-15	-5	-10	0	multi-exon	FALSE	canonical	3	79	junction_2	43.8453329687493	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGTGAGTCTTGTT	7666	False	NA	-3	True	AATAAA	-19	NA	35110639	34999000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_152290_12	chr6	-	3287	11	FSM	ENSMUSG00000038784.14	ENSMUST00000114989.9	3279	11	-10	2	-10	-2	multi-exon	FALSE	canonical	3	23	junction_1	65.3360543651053	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTCGGGTGAGTCTTG	7666	False	NA	-5	True	AATAAA	-17	NA	35110639	34999002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_152291_31	chr6	-	3290	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202143.4	3202	11	-90	2	0	-1	multi-exon	FALSE	canonical	3	23	junction_1	54.0722664588789	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCGGGTGAGTCTTGT	7655	False	NA	-4	True	AATAAA	-18	NA	35110650	34999001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_152295_7	chr6	-	3335	11	FSM	ENSMUSG00000038784.14	ENSMUST00000044163.10	3337	11	11	-9	-10	9	multi-exon	FALSE	canonical	3	46	junction_4	56.4779603031129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATGTTATATAGCATT	7666	False	NA	NA	False	AATAAA	-20	NA	35110639	35021880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_1523_90	chr10	-	3112	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100078.10	3226	3	114	0	114	0	multi-exon	FALSE	canonical	3	64	junction_2	10.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	4337994	4317074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_4319852_4324569_4324755_4337844
Isoform_152300_30	chr6	-	3335	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	10	-49	1	8	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAATGTTATATAGCAT	7656	False	NA	NA	False	AATAAA	-19	NA	35110649	35021881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_152301_17	chr6	-	3684	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	-10	-378	-10	337	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTTAATTCAATTATGG	7636	False	NA	NA	False	ATTAAA	-17	NA	35110669	35021552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_152303_10	chr6	-	4333	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	9	-1046	0	1005	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGAGACTTCAGGTTT	7655	False	NA	NA	False	ATTAAA	-21	NA	35110650	35020884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_152305_27	chr6	-	3443	16	FSM	ENSMUSG00000029843.5	ENSMUST00000031868.5	3427	16	-17	1	-17	-1	multi-exon	FALSE	canonical	2	6	junction_8	3.05213950460256	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAGAGTGAGGTCTACT	NA	False	NA	NA	False	AATAAA	-15	NA	35285083	35244892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35245904_35247278_35247417_35248543_35248706_35251850_35251976_35252575_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243_35257432_35260173_35260255_35261564_35261605_35264281_35264337_35264688_35264853_35266728_35266866_35278659_35278789_35284292
Isoform_152311_57	chr6	-	3871	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	103	-14	14	14	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCTTTTTTTTTTAAC	4251	False	NA	NA	False	ATTAAA	-29	NA	35516720	35485826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
Isoform_152312_667	chr6	-	3738	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	66	156	-23	-156	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTTAGCAACATATTT	4214	False	NA	-26	True	AATAAA	-20	NA	35516757	35485996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
Isoform_152323_141	chr6	-	3207	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	3	3872	3	3165	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCTTTCCTCTTTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	37419078	37308061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
Isoform_152324_73	chr6	-	3229	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-19	3872	-19	3165	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCTTTCCTCTTTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	37419100	37308061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
Isoform_152325_19	chr6	-	3333	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	1	3748	1	3289	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCTTACACTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	37419080	37307937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
Isoform_152330_14	chr6	-	7077	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	3	2	3	-2	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGCCTGGTCTTTAAA	NA	False	NA	-2	True	AATAAA	-16	NA	37419078	37304191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
Isoform_152331_54	chr6	-	2613	11	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40981	3165	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	25.5556256037687	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCTTTCCTCTTTCA	7991	False	NA	NA	False	ATTAAA	-20	NA	37354451	37308061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37354383
Isoform_152335_4	chr6	-	3282	11	ISM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-19	5681	-19	1356	5prime_fragment	FALSE	canonical	3	82	junction_9	9.78825827203185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATATACAAGTTGATCT	NA	False	NA	NA	False	AATAAA	-41	NA	37419100	37309870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
Isoform_152337_4	chr6	-	2866	22	NIC	ENSMUSG00000038600.13	novel	3307	22	NA	NA	119	4	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	2.77582697938851	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGTCGTTATTCCAAA	NA	False	NA	NA	False	NA	NA	NA	38074001	38025413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_38025534_38025916_38026019_38027400_38027573_38028378_38028497_38029944_38030053_38031489_38031592_38035659_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
Isoform_152338_16	chr6	-	3244	21	ISM	ENSMUSG00000038600.13	ENSMUST00000114908.5	3307	22	12488	-4	124	4	3prime_fragment	FALSE	canonical	2	4	junction_15	2.50199920063936	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGTCGTTATTCCAAA	NA	False	NA	NA	False	NA	NA	NA	38073996	38025413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_38026019_38027400_38027573_38028378_38028497_38029944_38030053_38031489_38031592_38035659_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
Isoform_152341_157	chr6	-	6511	5	NNC	ENSMUSG00000047749.3	novel	6536	4	NA	NA	1	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	62.1007246334534	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTATGTATAGTGATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	38276193	38264328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_38268467_38268492_38270073_38271992_38272255_38274886_38275023_38275798
Isoform_152347_13	chr6	-	5260	13	FSM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	-330	14	0	-14	multi-exon	TRUE	canonical	3	16	junction_3	27.2865453210104	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGCCCTCATTTGGT	9664	False	NA	-14	True	AATAAA	-18	NA	38331538	38282234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
Isoform_152352_57	chr6	-	3352	9	FSM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	45	3	45	-3	multi-exon	FALSE	canonical	3	57	junction_7	12.2212673238089	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGCAGTTGGATTTT	9709	False	NA	-6	True	NA	NA	NA	38331493	38292605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
Isoform_152353_50	chr6	-	3397	9	FSM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	0	3	0	-3	multi-exon	FALSE	canonical	3	57	junction_7	12.2212673238089	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGCAGTTGGATTTT	9664	False	NA	-6	True	NA	NA	NA	38331538	38292605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
Isoform_152356_3	chr6	-	3087	9	FSM	ENSMUSG00000029826.15	ENSMUST00000114898.3	3052	9	-38	3	-38	-3	multi-exon	FALSE	canonical	1	2	junction_5	27.0081006366608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGCAGTTGGATTTT	9626	False	NA	-6	True	NA	NA	NA	38331576	38292605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309424_38310124_38313346_38313600_38317154_38317291_38330849
Isoform_152357_4	chr6	-	3001	9	FSM	ENSMUSG00000029826.15	ENSMUST00000114898.3	3052	9	46	5	46	-5	multi-exon	FALSE	canonical	1	2	junction_5	27.0081006366608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTTTGCAGTTGGATT	9710	False	NA	-8	True	NA	NA	NA	38331492	38292607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309424_38310124_38313346_38313600_38317154_38317291_38330849
Isoform_152360_44	chr6	-	2269	5	FSM	ENSMUSG00000071537.7	ENSMUST00000096030.7	2276	5	-23	30	-14	-30	multi-exon	TRUE	canonical	3	11	junction_3	4.14578098794425	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGACCTTCACAAGATGG	NA	False	NA	NA	False	AATAAA	-15	NA	38614191	38603624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_38604661_38605019_38605124_38606698_38606845_38607215_38607318_38613310
Isoform_152363_4	chr6	-	4628	15	FSM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	-298	-463	-56	459	multi-exon	FALSE	canonical	2	8	junction_4	5.22601420681153	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCAGATGTCATTAATT	NA	False	NA	NA	False	GATAAA	-17	NA	38853155	38674355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
Isoform_152364_5	chr6	-	4744	15	FSM	ENSMUSG00000061436.16	ENSMUST00000161779.8	7684	15	-56	2996	-56	494	multi-exon	FALSE	canonical	2	8	junction_4	5.39131955374677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTTTTTTCTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	38853155	38674320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
Isoform_152367_26	chr6	-	3241	12	FSM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	-12	2	-12	-2	multi-exon	FALSE	canonical	3	16	junction_11	5.37671748458954	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGACTGGAGTTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	39095295	39063345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
Isoform_152368_18	chr6	-	3685	12	FSM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	-456	2	-456	-2	multi-exon	FALSE	canonical	3	16	junction_11	5.37671748458954	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGACTGGAGTTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	39095739	39063345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
Isoform_152369_20	chr6	-	3440	12	FSM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	-206	-3	-206	3	multi-exon	FALSE	canonical	3	16	junction_11	5.37671748458954	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGAGTTTATTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	39095489	39063340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
Isoform_152372_9	chr6	-	6310	20	FSM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	6	3250	6	2237	multi-exon	FALSE	canonical	3	12	junction_10	4.65544092368336	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	39183717	39116806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211_39150373_39152296_39152415_39158461_39158548_39183374
Isoform_152374_9	chr6	-	3095	18	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_15	99.4312546157579	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGCTTAAGCTTGAC	NA	False	NA	-8	True	AATAAA	-25	NA	39354624	39312919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
Isoform_152375_6	chr6	-	4311	18	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-15	3	combination_of_known_junctions	TRUE	canonical	3	23	junction_15	99.4312546157579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354624	39311703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
Isoform_152376_23	chr6	-	2936	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_15	85.4180308834148	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGCTTAAGCTTGACAT	NA	False	NA	-6	True	AATAAA	-27	NA	39354603	39312917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
Isoform_152377_9	chr6	-	4164	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_15	85.4180308834148	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354620	39311706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
Isoform_152378_34	chr6	-	2950	17	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_14	89.544681584112	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCCTGCTTAAGCTTGA	NA	False	NA	-9	True	AATAAA	-24	NA	39354603	39312920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
Isoform_152379_23	chr6	-	4185	17	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_14	89.544681584112	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354624	39311706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
Isoform_152382_7	chr6	-	4111	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_14	84.3388930973658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGCCCTTAAGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	39354608	39311705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39354552
Isoform_152383_13	chr6	-	2914	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_14	84.3388930973658	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	-7	True	AATAAA	-26	NA	39354624	39312918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39354552
Isoform_152384_186	chr6	-	2837	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-19	1212	-19	0	multi-exon	FALSE	canonical	3	160	junction_14	38.6108925098626	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	-7	True	AATAAA	-26	NA	39354628	39312918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_152385_106	chr6	-	4030	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	1	-1	1	1	multi-exon	FALSE	canonical	3	160	junction_14	38.6108925098626	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGCCCTTAAGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	39354608	39311705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_152392_24	chr6	-	2684	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	-15	0	-12	0	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	-7	True	AATAAA	-26	NA	39354621	39312918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_152393_17	chr6	-	3876	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	6	-1213	-4	1	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGCCCTTAAGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	39354600	39311705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_152395_9	chr6	-	2224	14	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	291	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	91.6373738385364	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACTGTATAATTAAA	NA	False	NA	1	True	AATAAA	-19	NA	39354624	39320552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
Isoform_152397_74	chr6	-	2085	13	ISM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	1	8846	1	291	5prime_fragment	FALSE	canonical	3	160	junction_12	41.2501683498248	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACTGTATAATTAAA	NA	False	NA	1	True	AATAAA	-19	NA	39354608	39320552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_152398_6	chr6	-	1953	12	ISM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	-18	7636	-15	289	5prime_fragment	FALSE	canonical	3	31	junction_7	79.0636316598199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGACTGTATAATTA	NA	False	NA	-1	True	AATAAA	-17	NA	39354624	39320554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_1524_52	chr10	-	3175	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100078.10	3226	3	51	0	51	0	multi-exon	FALSE	canonical	3	64	junction_2	10.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	4338057	4317074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_4319852_4324569_4324755_4337844
Isoform_152414_69	chr6	-	2893	8	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	2	-15	combination_of_known_junctions	FALSE	canonical	3	157	junction_7	1165.4745726921	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTGGT	NA	False	NA	-11	True	AATAAA	-9	NA	39396999	39374752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
Isoform_152417_1643	chr6	-	3021	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	10	15	10	-15	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	1643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTGGT	NA	False	NA	-11	True	AATAAA	-9	NA	39397386	39374752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
Isoform_152420_69	chr6	-	3071	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	-40	15	-40	-15	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTGGT	NA	False	NA	-11	True	AATAAA	-9	NA	39397436	39374752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
Isoform_152441_133	chr6	-	1587	5	FSM	ENSMUSG00000029922.16	ENSMUST00000051671.11	1511	5	-79	3	25	-3	multi-exon	FALSE	canonical	3	1568	junction_2	1258.9473777724	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGAGTCTGTGTGAA	NA	False	NA	-8	True	AATAAA	-13	NA	39397371	39377696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
Isoform_152455_1417	chr6	-	886	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	-144	9	20	-9	multi-exon	FALSE	canonical	3	4055	junction_2	144.5	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGAAGTGTCTCCGAA	NA	False	NA	-9	True	AATAAA	-16	NA	39397376	39382481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39382895_39387021_39387151_39397032
Isoform_152459_6	chr6	-	2455	11	FSM	ENSMUSG00000038456.10	ENSMUST00000149162.2	1702	11	126	-879	126	4	multi-exon	FALSE	canonical	3	101	junction_9	12.8953479984062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39465974	39439307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700
Isoform_152465_5	chr6	-	3593	20	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	123	21	combination_of_known_junctions	FALSE	canonical	3	8	junction_18	37.2191235508675	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGTTTGGCTCTTCCT	NA	False	NA	-2	True	ATTAAA	-14	NA	39534678	39440165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504415_39504518_39534508
Isoform_152466_114	chr6	-	4326	19	FSM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	146	-4	146	4	multi-exon	FALSE	canonical	3	100	junction_17	14.1962653756995	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39534655	39439307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
Isoform_152468_68	chr6	-	4440	19	FSM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	32	-4	32	4	multi-exon	FALSE	canonical	3	100	junction_17	14.1962653756995	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39534769	39439307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
Isoform_152472_4	chr6	-	4348	19	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	30448	4	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_18	30.8122550574994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39504353	39439307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504184
Isoform_152474_9	chr6	-	4244	18	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	27	4	combination_of_known_splicesites	FALSE	canonical	3	24	junction_14	27.1251106227713	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39534774	39439307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39483634_39483757_39485175_39485304_39499589_39500694_39534508
Isoform_152477_10	chr6	-	4284	15	ISM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	111	4949	111	877	5prime_fragment	FALSE	canonical	3	100	junction_13	14.3199589555905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTTTTATTTATTAT	NA	False	NA	NA	False	CATAAA	-18	NA	39534690	39444260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
Isoform_152478_6	chr6	-	4390	15	ISM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	21	4933	21	893	5prime_fragment	FALSE	canonical	3	100	junction_13	14.3199589555905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTGCTGTCTTTTGTC	NA	False	NA	NA	False	CATAAA	-34	NA	39534780	39444244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
Isoform_152481_5	chr6	-	3608	20	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-110	5071	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	7.35788720728475	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATTCTCCCTCTTCCTG	6601	False	NA	-15	True	AATAAA	-16	NA	39702237	39585974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
Isoform_152483_3	chr6	-	3724	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	1	1301	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	7.19481981002759	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATAATTGAGTTTGTA	6442	False	NA	NA	False	AATAAA	-21	NA	39702396	39589744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
Isoform_152485_3	chr6	-	4660	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-123	2383	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	7.19481981002759	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTCTGGGCCTTT	6588	False	NA	NA	False	CATAAA	-14	NA	39702250	39588662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
Isoform_152489_518	chr6	-	669	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	103	335	0	53	multi-exon	FALSE	canonical	3	1131	junction_2	267.5	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATGTCCTGTGCTTT	NA	False	NA	35	True	NA	NA	NA	39787819	39779072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39779479_39782304_39782546_39787797
Isoform_152492_24	chr6	-	509	3	FSM	ENSMUSG00000029918.10	ENSMUST00000114797.2	500	3	-2	-7	-2	7	multi-exon	FALSE	canonical	3	169	junction_1	481	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGATTGGAATGGCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	39787821	39779118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_39779479_39782420_39782546_39787797
Isoform_152494_27	chr6	-	6750	9	FSM	ENSMUSG00000037172.15	ENSMUST00000101492.10	6742	9	-9	1	-9	-1	multi-exon	FALSE	canonical	3	15	junction_1	5.09748712602592	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGTGCTGTGATCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	40413078	40378309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_40383869_40385202_40385272_40385992_40386144_40386275_40386408_40388539_40388679_40395425_40395580_40399659_40399819_40400657_40400758_40412791
Isoform_152495_6	chr6	-	3275	18	FSM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_2	1.13454714835211	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTCCCTTGATGTTTT	8190	False	NA	NA	False	AATAAA	-17	NA	42350202	42335418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_42335781_42335869_42336026_42337478_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709_42343113_42344519_42344802_42349108_42349177_42350059
Isoform_152496_4	chr6	-	4330	8	FSM	ENSMUSG00000029851.6	ENSMUST00000031879.5	4497	8	163	4	163	-4	multi-exon	FALSE	canonical	0	0	junction_1	1.16057691494799	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCCTGCTTTTCTTGTG	NA	False	NA	NA	False	AAGAAA	-11	NA	42622025	42599953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_42601550_42603050_42603389_42604207_42604448_42604852_42605067_42605955_42606054_42606334_42607330_42619402_42620040_42621813
Isoform_152497_3	chr6	-	3038	9	FSM	ENSMUSG00000036667.15	ENSMUST00000045054.11	5257	9	0	2219	0	-279	multi-exon	FALSE	canonical	1	2	junction_8	3.27633560552029	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAGAAAGTAAATGAAGA	6073	False	NA	NA	False	NA	NA	NA	42687022	42647154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42686892
Isoform_1525_15	chr10	-	3279	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100078.10	3226	3	-53	0	-53	0	multi-exon	FALSE	canonical	3	64	junction_2	10.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	4338161	4317074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_4319852_4324569_4324755_4337844
Isoform_152501_4	chr6	-	2821	8	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-215	-66	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	11.1721227405812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTAGTTGGTTTGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	43603115	43322072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43602626
Isoform_152502_20	chr6	-	2587	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	88	-4	-15	4	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGCTGTGGTATTAAGT	NA	False	NA	-2	True	ATTAAA	-23	NA	43643124	43321930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
Isoform_152503_12	chr6	-	2605	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	66	0	7	0	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCAATGCTGTGGTATT	NA	False	NA	-6	True	ATTAAA	-19	NA	43643146	43321934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
Isoform_152506_3	chr6	-	2395	8	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	4	-69	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	14.6524358913807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTCTGTAGTTGGTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	43643149	43322075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43642693_43642752_43643069
Isoform_152507_4	chr6	-	2880	7	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-206	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	17.2570436505085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCTGTGGTATTAAG	NA	False	NA	-3	True	ATTAAA	-22	NA	43603106	43321931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43536876_43536947_43588247_43588320_43602626
Isoform_152508_4	chr6	-	2458	8	FSM	ENSMUSG00000029735.18	ENSMUST00000114644.8	2148	8	-33	-277	11	4	multi-exon	FALSE	canonical	0	0	junction_2	15.0319387862467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGCTGTGGTATTAAGT	NA	False	NA	-2	True	ATTAAA	-23	NA	43643142	43321930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_43323835_43400554_43400667_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
Isoform_152514_27	chr6	-	2673	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-7	44	combination_of_known_junctions	FALSE	canonical	3	48	junction_12	239.071333482446	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGTCCTAGAACATC	NA	False	NA	-14	True	AATAAA	-23	NA	47571971	47507208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
Isoform_152521_336	chr6	-	2643	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	7	137	7	43	multi-exon	FALSE	canonical	3	406	junction_7	166.792654135859	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571957	47507209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
Isoform_152527_173	chr6	-	2616	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	7	43	combination_of_known_junctions	FALSE	canonical	3	225	junction_17	211.360085807553	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571957	47507209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
Isoform_152533_28	chr6	-	2533	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	7	44	combination_of_known_junctions	TRUE	canonical	3	48	junction_11	225.69798458762	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGTCCTAGAACATC	NA	False	NA	-14	True	AATAAA	-23	NA	47571957	47507208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
Isoform_152541_517	chr6	-	2518	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	7	44	combination_of_known_junctions	FALSE	canonical	3	443	junction_6	133.55213528621	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGTCCTAGAACATC	NA	False	NA	-14	True	AATAAA	-23	NA	47571957	47507208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
Isoform_152546_110	chr6	-	2491	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	7	44	combination_of_known_junctions	FALSE	canonical	3	225	junction_16	191.882044849961	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGTCCTAGAACATC	NA	False	NA	-14	True	AATAAA	-23	NA	47571957	47507208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
Isoform_152571_3526	chr6	-	2323	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	71	5	5	-5	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	3526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATGTTGTTTGCCTTTT	8961	False	NA	18	True	TTTAAA	-19	NA	47790293	47773079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
Isoform_152572_174	chr6	-	2377	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	71	-49	5	49	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGTTTGTTTTTTATTT	8961	False	NA	72	True	NA	NA	NA	47790293	47773025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
Isoform_152573_49	chr6	-	2482	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	-88	5	-88	-5	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATGTTGTTTGCCTTTT	8802	False	NA	18	True	TTTAAA	-19	NA	47790452	47773079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
Isoform_152584_32	chr6	-	2887	4	FSM	ENSMUSG00000051499.8	ENSMUST00000058844.6	3191	4	307	-3	8	3	multi-exon	FALSE	canonical	3	13	junction_2	4.64279609239471	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCGTTTGGGTTTGCTTT	6027	False	NA	-4	True	AATACA	-23	NA	47807494	47796196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_47798636_47801974_47802131_47803895_47804023_47807329
Isoform_152586_4	chr6	-	3928	4	FSM	ENSMUSG00000051499.8	ENSMUST00000058844.6	3191	4	346	-1083	-17	1083	multi-exon	FALSE	canonical	3	13	junction_2	4.64279609239471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGTGTATGAAAGT	6066	False	NA	NA	False	AATAAA	-22	NA	47807455	47795116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_47798636_47801974_47802131_47803895_47804023_47807329
Isoform_152590_56	chr6	-	3236	6	NIC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-111	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	38.9122088810183	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGAGTGTTTCCTGTT	NA	False	NA	-6	True	AATAGA	-11	NA	48024839	48001141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565
Isoform_152593_32	chr6	-	3483	6	FSM	ENSMUSG00000071477.11	ENSMUST00000114583.8	3111	6	-392	20	-392	-3	multi-exon	FALSE	canonical	3	22	junction_5	40.7401521843009	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGAGTGTTTCCTGTT	NA	False	NA	-6	True	AATAGA	-11	NA	48025440	48001141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024919
Isoform_152596_41	chr6	-	3082	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	-38	140	-38	-140	multi-exon	FALSE	canonical	3	42	junction_5	33.5463857963865	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATCTGCACGGGGGCA	NA	False	NA	-8	True	AATAAA	-9	NA	48025883	48001278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
Isoform_152597_41	chr6	-	3219	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	-38	3	-38	-3	multi-exon	FALSE	canonical	3	42	junction_5	33.5463857963865	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGAGTGTTTCCTGTT	NA	False	NA	-6	True	AATAGA	-11	NA	48025883	48001141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
Isoform_152603_5	chr6	-	3596	7	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	394	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	52.1197872426799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGAGTGTTTCCTGT	NA	False	NA	-7	True	AATAGA	-10	NA	48025451	48001142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48022430_48022534_48024919
Isoform_152604_50	chr6	-	3593	7	FSM	ENSMUSG00000057691.9	ENSMUST00000203609.3	3648	7	54	1	7	-1	multi-exon	FALSE	canonical	3	21	junction_1	36.5714673238882	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	1104	False	NA	1	True	AATAAA	-16	NA	48063473	48039329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_152605_20	chr6	-	3641	7	FSM	ENSMUSG00000057691.9	ENSMUST00000203609.3	3648	7	6	1	6	-1	multi-exon	FALSE	canonical	3	21	junction_1	36.5714673238882	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	1056	False	NA	1	True	AATAAA	-16	NA	48063521	48039329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_152607_3	chr6	-	3747	7	NNC	ENSMUSG00000057691.9	novel	3648	7	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	47.316017959625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	996	False	NA	2	True	AATAAA	-17	NA	48063581	48039328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060154_48060239_48060540_48063248
Isoform_152608_7	chr6	-	3669	7	NNC	ENSMUSG00000057691.9	novel	3648	7	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	47.316017959625	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	1073	False	NA	1	True	AATAAA	-16	NA	48063504	48039329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060154_48060239_48060540_48063248
Isoform_152609_37	chr6	-	3596	7	FSM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	54	1	7	-1	multi-exon	FALSE	canonical	3	32	junction_1	32.8988348324577	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	1104	False	NA	1	True	AATAAA	-16	NA	48063473	48039329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_152611_8	chr6	-	3700	7	FSM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	-52	3	-52	-3	multi-exon	FALSE	canonical	3	32	junction_1	32.8988348324577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCTGTTTCATGGATTC	998	False	NA	-1	True	AATAAA	-14	NA	48063579	48039331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_152612_23	chr6	-	3680	7	FSM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	-30	1	-30	-1	multi-exon	FALSE	canonical	3	32	junction_1	32.8988348324577	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	1020	False	NA	1	True	AATAAA	-16	NA	48063557	48039329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_152613_6	chr6	-	3672	7	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	45.192182214774	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1074	False	NA	2	True	AATAAA	-17	NA	48063503	48039328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060154_48060239_48060540_48063248
Isoform_152614_13	chr6	-	1269	6	ISM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	54	3804	7	12	5prime_fragment	FALSE	canonical	3	96	junction_1	16.8760184877832	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTTGCGCCCGGGATGA	1104	False	NA	NA	False	NA	NA	NA	48063473	48043132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_152615_8	chr6	-	1330	6	ISM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	56	3741	9	75	5prime_fragment	FALSE	canonical	3	96	junction_1	16.8760184877832	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGGCTCATTCCCTGA	1106	False	NA	NA	False	NA	NA	NA	48063471	48043069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_152616_3	chr6	-	1416	6	ISM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	-94	3805	-94	11	5prime_fragment	FALSE	canonical	3	96	junction_1	16.8760184877832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCTTGCGCCCGGGATG	956	False	NA	NA	False	NA	NA	NA	48063621	48043133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_152618_4	chr6	-	1405	6	ISM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	-22	3744	-22	72	5prime_fragment	FALSE	canonical	3	96	junction_1	16.8760184877832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATTTGGCTCATTCCC	1028	False	NA	NA	False	NA	NA	NA	48063549	48043072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_152631_35	chr6	-	3784	14	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	1533	-3	737	3	3prime_fragment	FALSE	canonical	3	468	junction_8	38.3789883342713	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTAGTATGTTTT	NA	False	NA	-21	True	AATAAA	-18	NA	49190358	49062153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200
Isoform_152636_16	chr6	-	3935	15	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	264	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	136.261752910061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCTTCTGTAGTAT	NA	False	NA	-26	True	AATAAA	-13	NA	49190831	49062158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49190578
Isoform_152646_227	chr6	-	4222	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	128	-5	-125	5	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTAGTATGTTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	49191763	49062151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
Isoform_152647_64	chr6	-	4310	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	31	4	31	-4	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACAGCTTCTGTAGT	NA	False	NA	-28	True	AATAAA	-11	NA	49191860	49062160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
Isoform_152653_40	chr6	-	4823	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	-473	-5	-473	5	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTAGTATGTTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	49192364	49062151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
Isoform_152684_252	chr6	-	1807	8	FSM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	-1	-7	-1	3	multi-exon	FALSE	canonical	3	256	junction_7	100.796420409392	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4592	False	NA	-1	True	AATAAA	-18	NA	49240965	49220854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
Isoform_152686_54	chr6	-	2113	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_7	180.182372889248	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	4592	False	NA	-7	True	AATAAA	-12	NA	49240965	49220860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229730_49230043_49240771
Isoform_152688_20	chr6	-	2131	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	181.788983095786	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4562	False	NA	-8	True	AATAAA	-11	NA	49240995	49220861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229741_49230043_49240771
Isoform_152689_38	chr6	-	2383	8	NIC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-9	1	intron_retention	FALSE	canonical	3	123	junction_7	139.301024799547	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	4603	False	NA	-7	True	AATAAA	-12	NA	49240954	49220860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49230043_49240771
Isoform_152692_24	chr6	-	1795	8	FSM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	-21	3	-1	1	multi-exon	FALSE	canonical	3	74	junction_2	153.460491492044	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	4592	False	NA	-7	True	AATAAA	-12	NA	49240965	49220860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_49221666_49221801_49221870_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
Isoform_152696_32	chr6	-	1799	8	NNC	ENSMUSG00000029817.12	novel	1799	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	153.460491492044	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	4591	False	NA	-7	True	AATAAA	-12	NA	49240966	49220860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_49221666_49221801_49221867_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
Isoform_1527_9	chr10	-	1993	13	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	29.0128084741129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCAGCTCTTAATTA	5756	False	NA	-3	True	NA	NA	NA	4382294	4353168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382063
Isoform_152705_57	chr6	-	2130	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	5	-2	5	0	multi-exon	FALSE	canonical	3	41	junction_4	6.09998988058258	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGGCTGTTCTATGT	8771	False	NA	0	True	ATTAAA	-18	NA	50238744	50184380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
Isoform_152706_8	chr6	-	2247	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	-112	-2	94	0	multi-exon	FALSE	canonical	3	41	junction_4	6.09998988058258	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGGCTGTTCTATGT	8654	False	NA	0	True	ATTAAA	-18	NA	50238861	50184380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
Isoform_152707_6	chr6	-	3375	23	NIC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	13	-3	combination_of_known_junctions	TRUE	canonical	2	5	junction_22	3.69861488480697	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGTGGGTTACAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	50433128	50273781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
Isoform_15271_778	chr11	-	3583	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	67	108	67	-108	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCAGTGGTGTTGACTC	NA	False	NA	-16	True	NA	NA	NA	88755345	88721725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
Isoform_152711_1812	chr6	-	530	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	64	2529	64	145	multi-exon	FALSE	canonical	3	4909	junction_2	335	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTACGGTCTTTATT	NA	False	NA	NA	False	AGTAAA	-15	NA	50543454	50542071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_152714_843	chr6	-	589	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	5	2529	5	145	multi-exon	FALSE	canonical	3	4909	junction_2	335	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTACGGTCTTTATT	NA	False	NA	NA	False	AGTAAA	-15	NA	50543513	50542071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_152715_224	chr6	-	977	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	33	2113	33	561	multi-exon	FALSE	canonical	3	4909	junction_2	335	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGTTGATCTGCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	50543485	50541655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_152716_148	chr6	-	1221	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	33	1869	33	805	multi-exon	FALSE	canonical	3	4909	junction_2	335	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGATTGTGCTTTGTT	NA	False	NA	-8	True	ATTAAA	-18	NA	50543485	50541411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_152717_371	chr6	-	944	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	66	2113	66	561	multi-exon	FALSE	canonical	3	4909	junction_2	335	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGTTGATCTGCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	50543452	50541655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_152718_98	chr6	-	627	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	-33	2529	-33	145	multi-exon	FALSE	canonical	3	4909	junction_2	335	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTACGGTCTTTATT	NA	False	NA	NA	False	AGTAAA	-15	NA	50543551	50542071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_15272_445	chr11	-	3721	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	36	1	36	-1	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGAGTCCATTTTTTCT	NA	False	NA	91	True	TATAAA	-6	NA	88755376	88721618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
Isoform_152720_280	chr6	-	1188	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	66	1869	66	805	multi-exon	FALSE	canonical	3	4909	junction_2	335	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGATTGTGCTTTGTT	NA	False	NA	-8	True	ATTAAA	-18	NA	50543452	50541411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_152722_4	chr19	+	304	1	FSM	ENSMUSG00000058927.7	ENSMUST00000073080.7	946	1	0	642	0	-642	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATCTTCGCTGGAAT	NA	False	NA	NA	False	AAAAAG	-16	NA	24853049	24853353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_24853000_24853400
Isoform_15273_260	chr11	-	3644	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	2	112	2	-112	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTTGCAGTGGTGTTG	NA	False	NA	-20	True	NA	NA	NA	88755410	88721729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
Isoform_152735_104	chr6	-	1661	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	2	-1	2	1	multi-exon	FALSE	canonical	3	287	junction_2	2567.02803044511	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTGGTGTAATGCTT	NA	False	NA	-23	True	AATAAA	-15	NA	51446823	51438102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_15274_23	chr11	-	3797	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	-40	1	-40	-1	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGAGTCCATTTTTTCT	NA	False	NA	91	True	TATAAA	-6	NA	88755452	88721618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
Isoform_152751_176	chr6	-	3015	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	615	junction_1	2007.26311180174	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_152752_79	chr6	-	3065	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	615	junction_1	2007.26311180174	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446873	51438103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_152762_86	chr6	-	1546	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2039.79651926363	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446845	51438103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_152764_168	chr6	-	1524	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2039.79651926363	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_15277_23	chr11	-	2882	2	ISM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	67	12315	67	-4135	5prime_fragment	FALSE	canonical	3	913	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTCAAAAAACCAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	88755345	88733932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_88736692_88755222
Isoform_152785_153	chr6	-	1771	12	FSM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-46	3	12	-3	multi-exon	FALSE	canonical	3	874	junction_11	2433.70552759395	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446852	51439742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
Isoform_152786_393	chr6	-	1742	12	FSM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-17	3	2	-3	multi-exon	FALSE	canonical	3	874	junction_11	2433.70552759395	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
Isoform_152789_3021	chr6	-	1706	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-71	3	2	-3	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	3021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_152790_1052	chr6	-	1752	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-117	3	-5	-3	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446869	51439742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_152793_83	chr6	-	3345	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-71	-1636	2	0	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_1528_142	chr10	-	1827	13	FSM	ENSMUSG00000019763.12	ENSMUST00000042251.11	3139	13	55	1257	1	-1	multi-exon	FALSE	canonical	3	107	junction_3	17.5220099684178	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCCTTTCAGCTCTTAA	5717	False	NA	-6	True	NA	NA	NA	4382333	4353171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
Isoform_152801_240	chr6	-	1586	10	FSM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	-71	3	2	-3	multi-exon	FALSE	canonical	3	933	junction_3	2022.94680547408	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_152802_82	chr6	-	1632	10	FSM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	-117	3	-5	-3	multi-exon	FALSE	canonical	3	933	junction_3	2022.94680547408	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446869	51439742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_152818_230	chr6	-	3501	10	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	5712	junction_9	757.172925761462	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_152820_106	chr6	-	3530	10	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	12	0	intron_retention	FALSE	canonical	3	5712	junction_9	757.172925761462	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446852	51438103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_152848_433	chr6	-	1631	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	8	1743	8	1	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTAGCCTGGTAT	836	False	NA	-6	True	AATAAA	-19	NA	51989521	51836144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
Isoform_152849_234	chr6	-	3374	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	6	2	6	-2	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTTATGATGCTAATAA	834	False	NA	-7	True	AATAAA	-16	NA	51989523	51834403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
Isoform_152854_16	chr6	-	2281	2	FSM	ENSMUSG00000029844.10	ENSMUST00000000964.6	2251	2	-25	-5	-25	5	multi-exon	FALSE	canonical	3	16	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCATCTTGTGTATTTGG	NA	False	NA	-1	True	AATAAA	-24	NA	52135322	52132564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_52134070_52134546
Isoform_152855_8	chr6	-	2069	3	FSM	ENSMUSG00000029844.10	ENSMUST00000120363.2	2043	3	-20	-6	-20	1	multi-exon	FALSE	canonical	2	5	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAAGCATCTTGTGTAT	NA	False	NA	-5	True	AATAAA	-20	NA	52135317	52132568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_52134070_52134546_52134642_52134844
Isoform_152857_14	chr6	-	2037	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	-26	-2	-26	2	multi-exon	FALSE	canonical	2	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACACGGACTGCTTTAT	9928	False	NA	NA	False	AATAAA	-16	NA	52194511	52191475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_52193011_52194009
Isoform_152859_5	chr6	-	1872	3	FSM	ENSMUSG00000038227.16	ENSMUST00000114425.3	851	3	3	-1024	3	3	multi-exon	FALSE	canonical	2	7	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTGCGGCTCTGCTCTT	9736	False	NA	NA	False	AATAAA	-18	NA	52203166	52200076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_52201463_52202507_52202598_52202770
Isoform_152862_12	chr6	-	2572	2	FSM	ENSMUSG00000000938.12	ENSMUST00000125581.2	2565	2	-8	1	-8	-1	multi-exon	FALSE	canonical	3	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTAATTTCACCTCT	9655	False	NA	-14	True	AATAAA	-14	NA	52211927	52208177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_52209761_52210938
Isoform_152863_9	chr6	-	1788	2	FSM	ENSMUSG00000000938.12	ENSMUST00000121043.2	1436	2	372	-724	313	-1	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTAATTTCACCTCT	14	True	NA	-14	True	AATAAA	-14	NA	52217462	52208177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_52209761_52217257
Isoform_152864_4	chr6	-	1622	2	FSM	ENSMUSG00000000938.12	ENSMUST00000142611.2	1045	2	304	-881	304	-2	multi-exon	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTTTTTAATTTCACC	5	True	NA	-17	True	AATAAA	-11	NA	52217471	52208180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_52209761_52217429
Isoform_152867_996	chr6	-	1779	8	FSM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	44	2	-30	-2	multi-exon	FALSE	canonical	3	833	junction_5	85.7178570684555	996	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGAGCTTTTTGTT	2883	False	NA	-3	True	AATAAA	-18	NA	52617330	52523214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
Isoform_152875_31	chr6	-	4700	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	106	4	106	-4	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTAGGAGCCTCTTGT	NA	False	NA	-4	True	AATAAA	-13	NA	54543368	54482878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
Isoform_152879_25	chr6	-	2736	4	FSM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	-43	1	-43	0	multi-exon	FALSE	canonical	3	17	junction_2	2.16024689946929	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTTGTACATGTGCAT	NA	False	NA	-1	True	AATAAA	-18	NA	54570205	54554589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_54556672_54562787_54562916_54566257_54566410_54569831
Isoform_152880_3	chr6	-	2924	6	NNC	ENSMUSG00000038074.17	novel	2754	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.2365041127896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTTGTACATGTGCAT	NA	False	NA	-1	True	AATAAA	-18	NA	54570168	54554589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_54556672_54559819_54559955_54562787_54562916_54563980_54564071_54566257_54566410_54569831
Isoform_152884_4	chr6	-	4335	12	NIC	ENSMUSG00000038058.15	novel	4064	12	NA	NA	-72	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	7.53723539206332	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCACTGTTTCTAATGGC	NA	False	NA	NA	False	AATAAA	-11	NA	54941745	54900937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115_54921941_54924933_54925109_54926416_54926739_54941377
Isoform_152885_22	chr6	-	4171	12	FSM	ENSMUSG00000038058.15	ENSMUST00000060655.15	4315	12	140	4	140	-4	multi-exon	FALSE	canonical	2	6	junction_10	5.88175495258975	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCACTGTTTCTAATGGC	NA	False	NA	NA	False	AATAAA	-11	NA	54949457	54900937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115_54921941_54924933_54925109_54926416_54926739_54949253
Isoform_152886_3	chr6	-	4362	12	FSM	ENSMUSG00000038058.15	ENSMUST00000060655.15	4315	12	-42	-5	-42	5	multi-exon	FALSE	canonical	2	6	junction_10	5.88175495258975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAATGGCCAAGTCTGG	NA	False	NA	NA	False	AATAAA	-20	NA	54949639	54900928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115_54921941_54924933_54925109_54926416_54926739_54949253
Isoform_152887_73	chr6	-	873	4	FSM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	19	3068	19	0	multi-exon	FALSE	canonical	3	101	junction_2	27.1947707391615	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	2719	False	NA	-2	True	ATTAAA	-32	NA	54969916	54962632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_54962987_54963817_54963954_54966396_54966543_54969679
Isoform_152890_14	chr6	-	780	4	FSM	ENSMUSG00000002797.10	ENSMUST00000204301.3	431	4	-65	-284	24	0	multi-exon	FALSE	canonical	3	46	junction_2	52.7320269538984	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	2724	False	NA	-2	True	ATTAAA	-32	NA	54969911	54962632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_54962987_54963817_54963954_54966484_54966543_54969679
Isoform_152892_4	chr6	-	1799	4	ISM	ENSMUSG00000003476.17	ENSMUST00000114374.9	1440	12	24378	-1158	7038	-6	3prime_fragment	FALSE	canonical	1	1	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTATCCAGCCTTACGC	NA	False	NA	NA	False	NA	NA	NA	55070520	55067039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_55068404_55069497_55069540_55069936_55070073_55070263
Isoform_152893_681	chr6	-	481	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	9	4	0	-2	multi-exon	FALSE	canonical	3	1056	junction_2	222.021395365402	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGTGATTTGATTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	56681668	56678051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
Isoform_152894_23	chr6	-	526	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	-34	2	-16	0	multi-exon	FALSE	canonical	3	1056	junction_2	222.021395365402	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGATTTGATTTATTA	NA	False	NA	NA	False	AATAAA	-14	NA	56681711	56678049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
Isoform_152895_9	chr6	-	546	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	9	-61	0	61	multi-exon	TRUE	canonical	3	1056	junction_2	222.021395365402	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCATATTGATTTCTGTT	NA	False	NA	NA	False	AATATA	-16	NA	56681668	56677986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
Isoform_152896_8	chr6	-	477	5	NIC	ENSMUSG00000091625.9	novel	494	5	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	642.467654827852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGTGATTTGATTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	56681668	56678051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_56678275_56679080_56679154_56679990_56680019_56680302_56680395_56681607
Isoform_1529_5	chr10	-	1755	12	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_11	34.497095338258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTTCAGCTCTTAATT	5696	False	NA	-4	True	NA	NA	NA	4382354	4353169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4382265
Isoform_152903_12	chr6	-	3739	4	NIC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	-86	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	83.0314532103481	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGGTTTTTTGGTT	NA	False	NA	-2	True	AATAAA	-15	NA	56774350	56754510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_56757399_56758785_56758952_56766203_56766686_56774147
Isoform_152904_323	chr6	-	3815	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	1	0	1	0	multi-exon	FALSE	canonical	3	176	junction_3	4.02768199119819	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9704	False	NA	0	True	AATAAA	-17	NA	56774720	56754508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774443
Isoform_152908_44	chr6	-	3806	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114321.2	3868	4	63	-1	-14	0	multi-exon	FALSE	canonical	3	30	junction_3	71.2569684701472	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9689	False	NA	0	True	AATAAA	-17	NA	56774735	56754508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774467
Isoform_152911_6	chr6	-	1511	10	FSM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	3	5	0	-5	multi-exon	FALSE	canonical	2	7	junction_9	89.8419737478734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCTGTTGTCCAGAT	9837	False	NA	-5	True	AATAAA	-21	NA	56878868	56859389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56878822
Isoform_152913_9	chr6	-	1653	10	FSM	ENSMUSG00000029780.15	ENSMUST00000152447.9	1067	10	-38	-548	0	-3	multi-exon	FALSE	canonical	3	11	junction_9	88.9986821930458	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTTGTCCAGATCA	1279	False	NA	-3	True	AATAAA	-23	NA	56900842	56859387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56900656
Isoform_152914_6	chr6	-	1705	10	FSM	ENSMUSG00000029780.15	ENSMUST00000152447.9	1067	10	-90	-548	-19	-3	multi-exon	FALSE	canonical	3	11	junction_9	88.9986821930458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTTGTCCAGATCA	1227	False	NA	-3	True	AATAAA	-23	NA	56900894	56859387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56900656
Isoform_152917_190	chr6	-	1650	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	23	3	-19	-3	multi-exon	FALSE	canonical	3	204	junction_8	16.5486970786222	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTTGTCCAGATCA	1227	False	NA	-3	True	AATAAA	-23	NA	56900894	56859387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
Isoform_152921_5	chr6	-	5621	8	NNC	ENSMUSG00000037826.6	novel	5560	7	NA	NA	-37	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.52545131594678	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCAGTTCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	57512490	57483481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_57485257_57485279_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721_57502240_57512264
Isoform_152922_106	chr6	-	799	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	0	2774	0	-2774	multi-exon	FALSE	canonical	3	182	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGATCTGTTTGTCTT	NA	False	NA	NA	False	TATAAA	-14	NA	57669063	57666334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_57666864_57668793
Isoform_152923_6	chr6	-	1115	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	2	2456	2	-2456	multi-exon	FALSE	canonical	3	182	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGTTTGCAGTGGTGG	NA	False	NA	NA	False	AATAAA	-26	NA	57669061	57666016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_57666864_57668793
Isoform_152927_35	chr6	-	2885	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	35	-1	12	1	multi-exon	FALSE	canonical	3	18	junction_1	0.866025403784439	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGATTTTTTTGGG	NA	False	NA	-1	True	AATAAA	-15	NA	57802109	57729248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
Isoform_152928_7	chr6	-	4295	18	FSM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	41	1450	-4	-1450	multi-exon	FALSE	canonical	1	1	junction_14	2.83331637148054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCATGGTTTCCTTCAT	NA	False	NA	NA	False	AATAAA	-34	NA	59001493	58910524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873_58961061_58964140_58964318_58966728_58966771_58980449_58980492_59001296
Isoform_152929_3	chr6	-	3968	18	FSM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	7	1811	7	1684	multi-exon	FALSE	canonical	1	1	junction_14	2.83331637148054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGTTTTCTATTTTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	59001527	58910885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873_58961061_58964140_58964318_58966728_58966771_58980449_58980492_59001296
Isoform_15293_2542	chr11	-	2039	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	57	1	57	-1	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	2542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGGCTGAAAATTCTGT	5258	False	NA	-10	True	AATAAA	-19	NA	88846234	88814846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
Isoform_152930_14	chr6	-	1129	6	FSM	ENSMUSG00000025889.14	ENSMUST00000114268.5	1280	6	145	6	13	-6	multi-exon	FALSE	canonical	2	14	junction_1	4.2614551505325	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCAAAATCTTTCCTGG	7719	False	NA	-12	True	AATAAA	-14	NA	60805843	60708568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60795307_60795350_60804464_60804612_60805707
Isoform_152931_145	chr6	-	1218	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	0	5	0	-5	multi-exon	FALSE	canonical	3	118	junction_1	3.77123616632825	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTCATTTCTCAACGT	NA	False	NA	-12	True	AATAAA	-14	NA	67014390	67012084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
Isoform_152936_5	chr6	-	1314	3	NIC	ENSMUSG00000036390.9	novel	1223	4	NA	NA	2	-1	intron_retention	FALSE	canonical	3	118	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTCTCAACGTGTGG	NA	False	NA	-8	True	AATAAA	-18	NA	67014388	67012080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_67012757_67013661_67014096_67014184
Isoform_152937_3	chr6	-	1175	5	ISM	ENSMUSG00000054474.16	ENSMUST00000074241.9	1821	10	9978	-4	-2397	4	3prime_fragment	TRUE	canonical	2	5	junction_3	1.78535710713571	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTTGTTTTGTTTTGT	NA	False	NA	4	True	NA	NA	NA	71111353	71105377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_71105837_71106195_71106348_71108631_71108758_71108858_71109008_71111064
Isoform_152941_13	chr6	-	5029	10	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	48.3600181764305	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTTTTTGTGGAT	NA	False	NA	-11	True	ATTAAA	-14	NA	71417621	71365628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
Isoform_152942_56	chr6	-	4689	10	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	101	3	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	48.3600181764305	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATACTCTCTGCTTAT	NA	False	NA	NA	False	AATAAA	-30	NA	71417520	71365867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
Isoform_152943_44	chr6	-	4928	10	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	101	-11	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	48.3600181764305	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTTTTTGTGGAT	NA	False	NA	-11	True	ATTAAA	-14	NA	71417520	71365628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
Isoform_152954_24	chr6	-	5914	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	0	251	0	2	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGATACTCTCTGCTTA	NA	False	NA	NA	False	AATAAA	-29	NA	71417621	71365868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
Isoform_152955_22	chr6	-	6160	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	0	5	0	-5	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	71417621	71365622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
Isoform_152956_85	chr6	-	5815	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	101	249	101	4	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATACTCTCTGCTTATT	NA	False	NA	NA	False	AATAAA	-31	NA	71417520	71365866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
Isoform_152957_71	chr6	-	6020	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	134	11	134	-11	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTTTTTGTGGAT	NA	False	NA	-11	True	ATTAAA	-14	NA	71417487	71365628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
Isoform_152973_10	chr6	-	3358	16	ISM	ENSMUSG00000053470.14	ENSMUST00000167220.4	4853	26	24768	68	1221	-5	3prime_fragment	FALSE	canonical	3	336	junction_9	48.7462363219516	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTCGCTGTTCTTTGT	NA	False	NA	-22	True	ATTAAA	-14	NA	71584902	71566025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385
Isoform_152976_370	chr6	-	3094	17	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	88	-4	combination_of_known_junctions	FALSE	canonical	3	172	junction_16	78.1394736592844	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71586035	71566024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
Isoform_152977_49	chr6	-	3165	17	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	17	-4	combination_of_known_junctions	FALSE	canonical	3	172	junction_16	78.1394736592844	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71586106	71566024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
Isoform_152979_31	chr6	-	4802	28	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	3	43	junction_18	130.557000254681	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609891	71566024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
Isoform_152983_14	chr6	-	4776	26	FSM	ENSMUSG00000053470.14	ENSMUST00000167220.4	4853	26	8	69	8	-6	multi-exon	FALSE	canonical	3	176	junction_18	109.170809285266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71609662	71566026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480
Isoform_152984_230	chr6	-	4760	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-13	69	-13	-4	multi-exon	FALSE	canonical	3	176	junction_18	110.285703472991	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609902	71566024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
Isoform_152985_105	chr6	-	4801	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-54	69	31	-4	multi-exon	FALSE	canonical	3	176	junction_18	110.285703472991	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609943	71566024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
Isoform_152987_10	chr6	-	4854	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-34	-4	-34	4	multi-exon	TRUE	canonical	3	176	junction_18	110.285703472991	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCATTTCTTAGTGACT	NA	False	NA	0	True	AATAAA	-22	NA	71609923	71565951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
Isoform_152999_674	chr6	-	740	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	40	2941	-7	225	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTAAATTTATTGTGCA	NA	False	NA	-28	True	ATTAAA	-27	NA	71800754	71792921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
Isoform_153_10	ERCC-00126	+	1109	1	FSM	ERCC-00126A	DQ459427	1111	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00126_+_0_1100
Isoform_1530_3	chr10	-	2222	12	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	-10	1	intron_retention	FALSE	canonical	3	107	junction_2	18.0417330717258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTTCAGCTCTTAATT	5696	False	NA	-4	True	NA	NA	NA	4382354	4353169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
Isoform_153000_59	chr6	-	1570	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	40	2111	-7	1055	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTCTACTTTACTTT	NA	False	NA	-1	True	AATAAA	-16	NA	71800754	71792091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
Isoform_153001_93	chr6	-	975	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	24	2722	-23	444	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTCCTCACTGTCTCCT	NA	False	NA	-9	True	AATAAA	-16	NA	71800770	71792702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
Isoform_153021_1675	chr6	-	2578	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	1675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTGTAAGCGTGTACA	3052	False	NA	-2	True	AATAAA	-27	NA	71885730	71857622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
Isoform_153033_225	chr6	-	2533	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_10	186.019177230523	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTGTAAGCGTGTACA	3046	False	NA	-2	True	AATAAA	-27	NA	71885736	71857622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
Isoform_15304_3	chr11	-	903	2	FSM	ENSMUSG00000057534.14	ENSMUST00000061938.14	819	2	-86	2	-72	-2	multi-exon	FALSE	canonical	3	61	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGCTCTCGCGTCATA	6733	False	NA	-2	True	AATAAA	-24	NA	88857829	88855485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88856100_88857540
Isoform_153046_1829	chr6	-	2150	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	1	93	1	-93	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGCTGTTGTTTCATA	NA	False	NA	-26	True	ATTAAA	-17	NA	72322166	72295753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
Isoform_153049_29	chr6	-	2990	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	3	-749	3	749	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTGATTAGCAGTGA	NA	False	NA	NA	False	AATAAA	-20	NA	72322164	72294911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
Isoform_153060_18	chr6	-	2090	4	ISM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	40	5	1	-5	intron_retention	FALSE	canonical	3	875	junction_2	70.8723421998235	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8448	False	NA	NA	False	TATAAA	-10	NA	72339375	72336701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394
Isoform_153063_1155	chr6	-	1389	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	40	5	1	-5	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8448	False	NA	NA	False	TATAAA	-10	NA	72339375	72336701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
Isoform_153069_89	chr6	-	1354	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	73	junction_4	391.378652969219	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8448	False	NA	NA	False	TATAAA	-10	NA	72339375	72336701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339258
Isoform_15307_9	chr11	-	841	2	FSM	ENSMUSG00000057534.14	ENSMUST00000061938.14	819	2	-24	2	-10	-2	multi-exon	FALSE	canonical	3	61	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGCTCTCGCGTCATA	6795	False	NA	-2	True	AATAAA	-24	NA	88857767	88855485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88856100_88857540
Isoform_153075_23	chr6	-	1622	4	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	-5	intron_retention	FALSE	canonical	3	875	junction_1	75.1546553596131	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8447	False	NA	NA	False	TATAAA	-10	NA	72339376	72336701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_72337933_72338099_72338210_72338394_72338523_72339223
Isoform_153078_6	chr6	-	675	3	FSM	ENSMUSG00000073002.10	ENSMUST00000101285.10	623	3	-59	7	-13	-1	multi-exon	FALSE	canonical	0	0	junction_2	4	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAATGCTCTCTCTCTC	9524	False	NA	NA	False	AGTAAA	-14	NA	72357464	72346017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72346454_72347176_72347315_72357363
Isoform_153079_137	chr6	-	742	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	72	6	72	-1	multi-exon	FALSE	canonical	3	289	junction_1	0.5	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTACGAGGCGCTTTACT	8165	False	NA	-24	True	AATAAA	-19	NA	72367614	72362211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72362637_72365244_72365404_72367456
Isoform_153087_1675	chr6	-	2802	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	3	-1	1	1	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTATTACTTGTC	NA	False	NA	-10	True	AATAAA	-18	NA	72416538	72409780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
Isoform_153088_66	chr6	-	2883	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	-78	-1	-78	1	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTATTACTTGTC	NA	False	NA	-10	True	AATAAA	-18	NA	72416619	72409780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
Isoform_15309_4	chr11	-	746	2	FSM	ENSMUSG00000085152.2	ENSMUST00000128078.2	581	2	-17	-148	-17	148	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATCAGATTTTTAA	9022	False	NA	NA	False	NA	NA	NA	88887387	88883717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88884304_88887227
Isoform_1531_7	chr10	-	2704	3	FSM	ENSMUSG00000019763.12	ENSMUST00000155172.8	776	3	-12	-1916	-6	767	multi-exon	FALSE	canonical	3	35	junction_2	63	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTTTCCAATGTCTGT	5743	False	NA	NA	False	AATAGA	-15	NA	4382307	4375326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_4377692_4379076_4379172_4382063
Isoform_153103_486	chr6	-	3387	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	1	-1	1	1	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTATTACTTGTC	NA	False	NA	-10	True	AATAAA	-18	NA	72416538	72409780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
Isoform_153119_12	chr6	-	2230	13	FSM	ENSMUSG00000056698.12	ENSMUST00000114069.8	2164	13	-69	3	2	-3	multi-exon	FALSE	canonical	1	3	junction_12	16.532795690183	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTCTTCCAAGATGAA	NA	False	NA	-2	True	AATAAA	-20	NA	72575394	72542907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72573418_72573450_72575304
Isoform_15312_57	chr11	-	4810	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	9	389	9	-389	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGGTGGGAGTGTTA	3841	False	NA	-6	True	AATAAA	-35	NA	88951565	88928796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
Isoform_153120_88	chr6	-	2202	12	FSM	ENSMUSG00000056698.12	ENSMUST00000070990.8	2122	12	-68	-12	2	0	multi-exon	FALSE	canonical	3	36	junction_11	7.42677755109095	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTCCAAGATGAAGTT	NA	False	NA	1	True	AATAAA	-23	NA	72575394	72542904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
Isoform_153121_3	chr6	-	1549	11	FSM	ENSMUSG00000056698.12	ENSMUST00000141833.8	2509	11	-14	974	4	804	multi-exon	FALSE	canonical	3	36	junction_10	7.7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGTGCCAGGCTGCGGC	NA	False	NA	NA	False	NA	NA	NA	72575392	72545506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
Isoform_15313_35	chr11	-	4682	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	-25	551	-25	-551	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGGGATTTTTATTTG	3807	False	NA	0	True	AGTAAA	-15	NA	88951599	88928958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
Isoform_153132_403	chr6	-	4764	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	255	-6	255	6	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACATTACATGTATTA	4674	False	NA	-31	True	AATAAA	-18	NA	72593728	72585408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
Isoform_153140_10	chr6	-	4826	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	255	-68	255	68	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAAGGTTTTTAATTT	4674	False	NA	31	True	ACTAAA	-20	NA	72593728	72585346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
Isoform_153146_248	chr6	-	3054	13	FSM	ENSMUSG00000055799.14	ENSMUST00000114053.9	1888	13	-269	-897	33	3	multi-exon	FALSE	canonical	3	158	junction_8	90.8812946772999	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCTGGATGTTTCTTTA	4856	False	NA	-5	True	AATAAA	-17	NA	72766204	72603357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
Isoform_153155_277	chr6	-	3012	12	FSM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	33	-3	33	3	multi-exon	FALSE	canonical	3	205	junction_8	63.9987086646582	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCTGGATGTTTCTTTA	4856	False	NA	-5	True	AATAAA	-17	NA	72766204	72603357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
Isoform_153164_10	chr6	-	3316	12	FSM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	-271	-3	-271	3	multi-exon	FALSE	canonical	3	205	junction_8	63.9987086646582	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCTGGATGTTTCTTTA	4552	False	NA	-5	True	AATAAA	-17	NA	72766508	72603357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
Isoform_153177_136	chr6	-	3215	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	44	-8	44	8	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCTTTGGTGTTGAAT	8509	False	NA	-1	True	AATAAA	-26	NA	72876918	72818088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
Isoform_153178_723	chr6	-	1810	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	45	1396	45	59	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTGCATGAGGTTTTTT	8510	False	NA	-25	True	AATAAA	-23	NA	72876917	72819492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
Isoform_15318_5	chr11	-	4785	11	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	12	-407	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	21.1388268359434	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACTTTATATTCAGA	3844	False	NA	-24	True	AATAAA	-17	NA	88951562	88928814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
Isoform_153181_27	chr6	-	1379	8	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	50	101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	404.082331477442	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCCTCTTTGATGACC	8515	False	NA	-30	True	AATAAA	-16	NA	72876912	72819866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596_72876736_72876787
Isoform_153185_72	chr6	-	3248	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	3	0	3	0	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACTCGAATTTCTTTGG	8468	False	NA	-9	True	AATAAA	-18	NA	72876959	72818096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
Isoform_153189_49	chr6	-	1906	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	-52	1397	-52	58	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	8413	False	NA	-26	True	AATAAA	-22	NA	72877014	72819493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
Isoform_15319_3	chr11	-	1229	3	ISM	ENSMUSG00000000276.12	ENSMUST00000152772.2	3562	11	2	13074	2	-13074	5prime_fragment	FALSE	canonical	3	69	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTAAAACAAAAATGATAT	3834	False	NA	NA	False	TATAAA	-23	NA	88951572	88943119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_88943373_88946183_88946344_88950756
Isoform_153196_546	chr6	-	523	2	FSM	ENSMUSG00000079523.9	ENSMUST00000114049.2	690	2	168	-1	168	1	multi-exon	FALSE	canonical	3	26814	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	-16	True	AATAAA	-15	NA	72935117	72934334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72934636_72934895
Isoform_1532_33	chr10	-	2536	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	18	-782	8	782	multi-exon	FALSE	canonical	3	145	junction_2	8	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTATAAGGCTTTGG	5724	False	NA	NA	False	AATAGA	-30	NA	4382326	4375311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_4377692_4379076_4379172_4382265
Isoform_15320_62	chr11	-	1950	6	FSM	ENSMUSG00000020553.9	ENSMUST00000020864.9	2723	6	21	752	21	-752	multi-exon	FALSE	canonical	3	31	junction_1	5.78273291792038	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCCCTCTTACCTT	NA	False	NA	-1	True	AATAAA	-25	NA	89893699	89874242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_89875583_89876918_89876987_89878021_89878194_89879520_89879601_89881896_89882015_89893527
Isoform_153201_9375	chr6	-	474	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	90	6	1	0	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	9375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGCGTGGTCTGAAT	NA	False	NA	-17	True	AATAAA	-14	NA	72935381	72934335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72934636_72934895_72935008_72935319
Isoform_153202_108	chr6	-	518	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	47	5	-42	1	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	-16	True	AATAAA	-15	NA	72935424	72934334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_72934636_72934895_72935008_72935319
Isoform_153207_203	chr6	-	1384	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	12	3604	12	519	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAAGTCTGCATGTCAG	NA	False	NA	NA	False	ATTAAA	-28	NA	81942927	81938435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
Isoform_15321_8	chr11	-	1872	5	NIC	ENSMUSG00000020553.9	novel	2723	6	NA	NA	27	-756	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	18.1435250158287	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTGTCTCCCTCTTA	NA	False	NA	-5	True	AATAAA	-21	NA	89893693	89874246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_89875583_89878021_89878194_89879520_89879601_89881896_89882015_89893527
Isoform_153212_8	chr6	-	3924	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	20	1056	20	-1056	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTCATAATTTCTTA	NA	False	NA	NA	False	AATATA	-29	NA	81942919	81935887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
Isoform_153216_24	chr6	-	727	4	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-4	202	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	385.203842140755	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTATGTCTCCCT	NA	False	NA	78	True	NA	NA	NA	82629855	82595770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_82596120_82628417_82628460_82629063_82629149_82629604
Isoform_153217_41	chr6	-	634	4	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-4	109	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	385.203842140755	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTTCTTTTTC	NA	False	NA	-15	True	NA	NA	NA	82629855	82595863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_82596120_82628417_82628460_82629063_82629149_82629604
Isoform_15322_4	chr11	-	1567	4	FSM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	-24	4099	-24	192	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTGTGCATCTATG	NA	False	NA	NA	False	NA	NA	NA	90281745	90231460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90281075
Isoform_153227_263	chr6	-	1133	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	55	581	-4	34	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGTGTTGCTCAGT	NA	False	NA	-2	True	NA	NA	NA	82629855	82624262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
Isoform_153229_27	chr6	-	720	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	19	1030	19	112	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	82629891	82624711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
Isoform_15323_3	chr11	-	5666	4	FSM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	-24	0	-24	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTATTTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	90281745	90227361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90281075
Isoform_153232_64	chr6	-	1703	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	57	9	-2	-9	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCAGTCTTTCTTGA	NA	False	NA	-8	True	ATTAAA	-18	NA	82629853	82623690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
Isoform_153234_12	chr6	-	1761	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	3	5	3	-5	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTCTTTCTTGAAGTG	NA	False	NA	-4	True	ATTAAA	-22	NA	82629907	82623686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
Isoform_153237_12	chr6	-	1067	4	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-2	34	combination_of_known_junctions	FALSE	canonical	3	146	junction_3	397.998604129322	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGTGTTGCTCAGT	6107	False	NA	-2	True	NA	NA	NA	82682348	82624262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163
Isoform_153239_9	chr6	-	1579	4	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	59	-8	combination_of_known_junctions	FALSE	canonical	3	146	junction_3	397.998604129322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCCAGTCTTTCTTGAA	6168	False	NA	-7	True	ATTAAA	-19	NA	82682287	82623689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163
Isoform_15324_24	chr11	-	2533	18	FSM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	9	3443	1	-3443	multi-exon	FALSE	canonical	2	8	junction_15	2.25532817796245	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	90528901	90370760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_90371541_90385427_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
Isoform_153242_31	chr6	-	918	4	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	16631	35	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_3	429.604727886254	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTTGCTCAGTG	NA	False	NA	-1	True	NA	NA	NA	82665715	82624261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82665680
Isoform_153250_9	chr6	-	1738	3	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-4	35	intron_retention	FALSE	canonical	3	735	junction_2	79	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTTGCTCAGTG	NA	False	NA	-1	True	NA	NA	NA	82629855	82624261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_82625018_82628417_82629149_82629604
Isoform_153257_39	chr6	-	2794	4	NNC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	-3390	-5	intron_retention	FALSE	non_canonical	0	0	junction_2	278.225727702446	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTCAGTGTGTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	82706680	82702010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_82704436_82705692_82705778_82705797_82705927_82706525
Isoform_15327_349	chr11	-	2055	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	28	2225	0	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTTGTTTTGTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	90578405	90536515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
Isoform_15328_32	chr11	-	2130	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	-47	2225	-47	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTTGTTTTGTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	90578480	90536515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
Isoform_15329_9	chr11	-	4287	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	29	-8	1	8	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGGTTGTCTGACATT	NA	False	NA	NA	False	AATAAA	-21	NA	90578404	90534282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
Isoform_153293_751	chr6	-	5489	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	19	5	19	-5	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTCAGTGTGTGAT	9417	False	NA	-6	True	AATAAA	-18	NA	82751416	82702010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
Isoform_15330_6	chr11	-	2089	16	FSM	ENSMUSG00000020541.13	ENSMUST00000107868.8	2093	16	2	2	2	-2	multi-exon	FALSE	canonical	2	5	junction_14	62.6969430408426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTGTTGTTGTTTTG	NA	False	NA	-4	True	ATTAAA	-15	NA	90578425	90536518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574157_90575887_90575973_90578338
Isoform_153304_45	chr6	-	4079	14	FSM	ENSMUSG00000000627.16	ENSMUST00000000641.15	4086	14	5	2	5	-2	multi-exon	FALSE	canonical	3	23	junction_9	5.49986551745215	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGCGGGCGTGGTTATT	NA	False	NA	-7	True	NA	NA	NA	82916745	82888867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896450_82896543_82896664_82907878_82907973_82912567_82912667_82912875_82912936_82914041_82914194_82916441
Isoform_153305_71	chr6	-	4052	14	FSM	ENSMUSG00000000627.16	ENSMUST00000000641.15	4086	14	34	0	34	0	multi-exon	FALSE	canonical	3	23	junction_9	5.49986551745215	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGCGTGGTTATTGT	NA	False	NA	-5	True	NA	NA	NA	82916716	82888865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896450_82896543_82896664_82907878_82907973_82912567_82912667_82912875_82912936_82914041_82914194_82916441
Isoform_153307_8	chr6	-	1790	5	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	13.3510299228187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGGCCTCTGCGTATG	NA	False	NA	-10	True	ATTAAA	-13	NA	83010443	83007920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010046_83010351
Isoform_153308_43	chr6	-	1784	5	FSM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	20	3	17	3	multi-exon	FALSE	canonical	3	30	junction_1	5.31507290636732	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCTCTGCGTATGAAT	NA	False	NA	-7	True	ATTAAA	-16	NA	83010432	83007917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010048_83010351
Isoform_153310_11	chr6	-	1714	5	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	13	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	11.7686022959398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCTCTGCGTATGAAT	NA	False	NA	-7	True	ATTAAA	-16	NA	83010436	83007917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83009042_83009285_83009397_83009515_83009610_83009747_83010048_83010351
Isoform_153311_5	chr6	-	1966	4	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	5	3	intron_retention	FALSE	canonical	3	31	junction_1	4.92160768674447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCTCTGCGTATGAAT	NA	False	NA	-7	True	ATTAAA	-16	NA	83010444	83007917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83009397_83009515_83009610_83009747_83010048_83010351
Isoform_153314_20	chr6	-	1519	8	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	183.177063888179	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGGGGGTTGGATCT	2021	False	NA	-3	True	AATAAA	-26	NA	83031428	83028251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029708_83030018_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_153318_103	chr6	-	1780	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	-58	3	-58	-3	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGGGGTTGGATCTTC	1839	False	NA	-1	True	AATAAA	-28	NA	83031610	83028249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_153319_765	chr6	-	1612	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	110	3	-19	-3	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGGGGTTGGATCTTC	2007	False	NA	-1	True	AATAAA	-28	NA	83031442	83028249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_153324_17	chr6	-	1941	6	FSM	ENSMUSG00000068329.13	ENSMUST00000144058.4	1108	6	-630	-203	-25	1	multi-exon	FALSE	canonical	3	493	junction_5	53.5447476415755	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTTACAGTCAAAAGTG	2001	False	NA	-15	True	AATAAA	-14	NA	83031448	83028263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83030052_83030309_83030505_83030593
Isoform_153325_21	chr6	-	1848	7	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	429	junction_6	64.9095524557056	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	2008	False	NA	2	True	AATAAA	-31	NA	83031441	83028246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_153327_11	chr6	-	1552	7	NIC	ENSMUSG00000068329.13	novel	1605	7	NA	NA	-32	7	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	199.430578286168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAAAGTGGGGGTTGGAT	1994	False	NA	-5	True	AATAAA	-24	NA	83031455	83028253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029981_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_153332_6	chr6	-	2693	2	ISM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-801	-268	-801	1	intron_retention	FALSE	canonical	3	90	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTCCAGTTGTCT	6375	False	NA	-5	True	AAAACA	-21	NA	83048075	83045303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_83045956_83046034
Isoform_153333_106	chr6	-	2305	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-800	-269	-800	2	multi-exon	FALSE	canonical	3	90	junction_1	3	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTCTCCAGTTGTCTC	6376	False	NA	-4	True	AAAACA	-22	NA	83048074	83045302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83045956_83046034_83046273_83046660
Isoform_153340_5	chr6	-	2908	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-137	-1535	-137	1268	multi-exon	FALSE	canonical	3	90	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	7039	False	NA	NA	False	NA	NA	NA	83047411	83044036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83045956_83046034_83046273_83046660
Isoform_153344_6	chr6	-	1544	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	-29	-1	-29	1	multi-exon	FALSE	canonical	3	96	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTCCAGTTGTCT	7215	False	NA	-5	True	AAAACA	-21	NA	83047235	83045303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83046273_83046660
Isoform_153347_3	chr6	-	1233	3	NIC	ENSMUSG00000087578.2	novel	891	3	NA	NA	-1	414	combination_of_known_splicesites	TRUE	canonical	1	1	junction_2	2	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGACGTGGATATAT	NA	False	NA	NA	False	NA	NA	NA	83086036	83083174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83084172_83084723_83084788_83085864
Isoform_153348_15	chr6	-	1308	5	FSM	ENSMUSG00000030035.15	ENSMUST00000146328.4	981	5	-65	-262	-46	0	multi-exon	FALSE	canonical	3	42	junction_4	48.7769156466458	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098433	83096025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097855_83098183
Isoform_153351_44	chr6	-	1297	5	FSM	ENSMUSG00000030035.15	ENSMUST00000032111.11	1419	5	121	1	-32	0	multi-exon	FALSE	canonical	3	121	junction_4	18.4390889145858	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098419	83096025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097858_83098183
Isoform_153353_32	chr6	-	1175	4	FSM	ENSMUSG00000030035.15	ENSMUST00000113936.10	1314	4	138	1	-15	0	multi-exon	FALSE	canonical	3	41	junction_3	56.6627449623354	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098402	83096025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83098183
Isoform_153354_6	chr6	-	1750	4	NIC	ENSMUSG00000030035.15	novel	1902	4	NA	NA	-4	0	intron_retention	TRUE	canonical	3	42	junction_3	56.1921307262463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098391	83096025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83096702_83096848_83097026_83097165_83097855_83098183
Isoform_153355_20	chr6	-	1766	4	FSM	ENSMUSG00000030035.15	ENSMUST00000131939.6	1902	4	136	0	-17	0	multi-exon	FALSE	canonical	3	121	junction_3	19.1369334592098	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098404	83096025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83096702_83096848_83097026_83097165_83097858_83098183
Isoform_153356_5	chr6	-	1414	4	NIC	ENSMUSG00000030035.15	novel	1419	5	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	121	junction_3	19.1369334592098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGATTCTGGGTA	NA	False	NA	-10	True	ATTAAA	-14	NA	83098391	83096027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83097026_83097165_83097269_83097752_83097858_83098183
Isoform_153357_5	chr6	-	1356	3	NIC	ENSMUSG00000030035.15	novel	1314	4	NA	NA	-49	0	intron_retention	FALSE	canonical	3	41	junction_2	62	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098436	83096025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83097026_83097165_83097269_83098183
Isoform_153358_8	chr6	-	1928	3	NIC	ENSMUSG00000030035.15	novel	1902	4	NA	NA	-32	0	intron_retention	FALSE	canonical	3	121	junction_2	22	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098419	83096025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83097026_83097165_83097858_83098183
Isoform_153359_57	chr6	-	1263	5	FSM	ENSMUSG00000030034.13	ENSMUST00000032109.5	1038	5	-165	-60	-165	-3	multi-exon	FALSE	canonical	3	116	junction_3	6.41774882649672	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGTATCGAATTGCT	NA	False	NA	-13	True	ATTAAA	-15	NA	83102175	83098748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83099346_83100974_83101145_83101287_83101407_83101565_83101759_83101991
Isoform_153361_6	chr6	-	1234	10	FSM	ENSMUSG00000030032.15	ENSMUST00000153148.8	4634	10	50	3350	32	-1	multi-exon	FALSE	canonical	3	33	junction_4	3.94405318873308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGTCTGAGCACTCA	9932	False	NA	-1	True	TATAAA	-17	NA	83133329	83129691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156
Isoform_153362_43	chr6	-	1182	11	FSM	ENSMUSG00000030032.15	ENSMUST00000125894.9	1216	11	28	6	10	-6	multi-exon	FALSE	canonical	1	8	junction_10	9.65453261426984	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTCCTTGTCTGAGC	9910	False	NA	-6	True	TATAAA	-12	NA	83133351	83129696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156_83133228_83133296
Isoform_153379_2475	chr6	-	2058	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	11	16	11	-16	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	2475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCGTTTCTGAAATGCT	NA	False	NA	-14	True	AATAAA	-19	NA	83294577	83282688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
Isoform_15339_60	chr11	-	1951	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	-47	709	-47	-709	multi-exon	FALSE	canonical	3	770	junction_1	49.2161035848126	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTGTACATGATTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	93776639	93750777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
Isoform_153398_4	chr6	-	1522	3	ISM	ENSMUSG00000034832.16	ENSMUST00000056191.2	2523	4	27	5023	-19	1029	5prime_fragment	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAAAGAAAAAGAAGCCC	NA	False	NA	NA	False	NA	NA	NA	83418633	83380443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_83381807_83418198_83418256_83418531
Isoform_153399_3	chr6	-	2434	4	ISM	ENSMUSG00000034832.16	ENSMUST00000186548.7	5944	12	-175	35416	-175	1033	5prime_fragment	FALSE	canonical	1	2	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGAAGCCCCCCA	9162	False	NA	NA	False	NA	NA	NA	83433549	83380439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_83381807_83418198_83418256_83431731_83432463_83433270
Isoform_15340_802	chr11	-	1851	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	55	707	55	-707	multi-exon	FALSE	canonical	3	770	junction_1	49.2161035848126	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTACATGATTTTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	93776537	93750775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
Isoform_153400_3	chr6	-	4398	7	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	-5	0	intron_retention	TRUE	canonical	3	8	junction_4	93.7077312119384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483894	83457200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83458759_83458821_83463965_83467591_83473667_83473781_83483729
Isoform_153401_154	chr6	-	1041	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	65	1	3	-1	multi-exon	FALSE	canonical	3	197	junction_5	13.5369863706809	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTGTTCGTTTATTT	NA	False	NA	-4	True	AATAAA	-22	NA	83483886	83457199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
Isoform_153403_15	chr6	-	940	6	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	77.3356321497406	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTGTTCGTTTATTT	NA	False	NA	-4	True	AATAAA	-22	NA	83483898	83457199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83483729
Isoform_153405_25	chr6	-	942	6	FSM	ENSMUSG00000014554.14	ENSMUST00000113888.3	1007	6	64	1	2	-1	multi-exon	FALSE	canonical	3	23	junction_1	78.3019795407498	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTGTTCGTTTATTT	NA	False	NA	-4	True	AATAAA	-22	NA	83483887	83457199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83457419_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
Isoform_153406_3	chr6	-	828	5	NIC	ENSMUSG00000014554.14	novel	1007	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	98.6508996411082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483887	83457200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_83457419_83458328_83458445_83463965_83464114_83467402_83467591_83483729
Isoform_153409_45	chr6	-	2091	10	FSM	ENSMUSG00000006906.11	ENSMUST00000068054.9	2364	10	280	-7	-10	0	multi-exon	FALSE	canonical	3	22	junction_4	7.14920352984241	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGAGTGATTTGTCTGA	NA	False	NA	-10	True	AATAAA	-20	NA	83549431	83520198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
Isoform_153411_23	chr6	-	1370	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5452	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	36.2724068680312	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAGGCGGACTTTGCT	2736	False	NA	-10	True	NA	NA	NA	83675073	83669786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_83670449_83671329_83671456_83672566_83672939_83673961_83674051_83674952
Isoform_153412_13	chr6	-	2398	4	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5446	0	intron_retention	FALSE	canonical	3	98	junction_3	15.6914697279198	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	2730	False	NA	-11	True	NA	NA	NA	83675079	83669787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_83670449_83671329_83671456_83672566_83674051_83674952
Isoform_153413_3	chr6	-	1238	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5443	2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_3	35.8712977183709	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGGCGGACTTTGCTT	2727	False	NA	-9	True	NA	NA	NA	83675082	83669785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_83670449_83671329_83671456_83672566_83672797_83673961_83674051_83674952
Isoform_153414_3	chr6	-	2013	2	FSM	ENSMUSG00000085794.6	ENSMUST00000155159.4	4063	2	76	1974	76	-1	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAGTTTTGTATGTAG	NA	False	NA	NA	False	AATAAA	-11	NA	83687838	83679112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83681003_83687715
Isoform_153417_393	chr6	-	2982	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	2	0	2	0	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTAGTGTGTGACC	9714	False	NA	-4	True	NA	NA	NA	83752793	83745866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
Isoform_153423_119	chr6	-	3294	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	29	659	1	-659	multi-exon	FALSE	canonical	3	74	junction_4	4.71036092035419	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCCAGGTTATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	83808694	83783041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
Isoform_153434_264	chr6	-	5426	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	14	-1	3	1	multi-exon	TRUE	canonical	3	201	junction_13	26.9684454901315	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTTGTGAGATT	NA	False	NA	-1	True	ATTAAA	-31	NA	85046481	84595467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
Isoform_153438_24	chr6	-	5259	21	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_20	52.9942213830904	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046481	84595468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_85046277
Isoform_15344_24	chr11	-	2557	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	55	1	55	-1	multi-exon	TRUE	canonical	3	770	junction_1	49.2161035848126	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATGCTTTGATCAAAC	NA	False	NA	NA	False	AAGAAA	-3	NA	93776537	93750069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
Isoform_153441_6	chr6	-	546	3	FSM	ENSMUSG00000033769.17	ENSMUST00000162786.2	565	3	18	1	0	-1	multi-exon	FALSE	canonical	3	244	junction_1	24	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAATCATTGAGTAG	NA	False	NA	NA	False	AATAAA	-30	NA	85046439	84981800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_84982019_84988299_84988466_85046277
Isoform_153442_707	chr6	-	1229	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	0	1	0	-1	multi-exon	FALSE	canonical	3	345	junction_2	5	707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGTGTGCGTTGTCCTT	7982	False	NA	NA	False	AATACA	-20	NA	85114748	85110660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85111271_85113804_85114096_85114420
Isoform_153454_25	chr6	-	4999	6	FSM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	-50	1170	-50	-1170	multi-exon	FALSE	canonical	3	80	junction_3	21.2188595357997	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGGATGTAGATGTCT	NA	False	NA	-12	True	ATTAAA	-27	NA	85351666	85313118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079
Isoform_153456_64	chr6	-	6111	6	FSM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	8	0	8	0	multi-exon	FALSE	canonical	3	80	junction_3	21.2188595357997	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTTGTGTGTTTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	85351608	85311948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079
Isoform_153457_46	chr6	-	6138	6	FSM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	-19	0	-19	0	multi-exon	FALSE	canonical	3	80	junction_3	21.2188595357997	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTTGTGTGTTTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	85351635	85311948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079
Isoform_153458_49	chr6	-	4134	5	FSM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	-103	4	-33	1	multi-exon	FALSE	canonical	3	27	junction_2	41.9344726925235	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	NA	False	NA	-1	True	AATAAA	-17	NA	85351649	85311947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536_85325974_85351079
Isoform_153460_36	chr6	-	1075	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	-37	0	-37	0	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428302	85423791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
Isoform_153461_47	chr6	-	1023	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	15	0	-12	0	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428250	85423791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
Isoform_153462_3	chr6	-	1673	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	-635	0	27	0	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428900	85423791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
Isoform_153463_45	chr6	-	979	5	FSM	ENSMUSG00000030008.10	ENSMUST00000126805.8	953	5	102	-128	77	0	multi-exon	FALSE	canonical	3	68	junction_4	38.4991883031318	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428850	85423791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
Isoform_153464_5	chr6	-	1049	5	FSM	ENSMUSG00000030008.10	ENSMUST00000126805.8	953	5	31	-127	6	-1	multi-exon	FALSE	canonical	3	68	junction_4	38.4991883031318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428921	85423792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
Isoform_153466_3	chr6	-	923	4	NIC	ENSMUSG00000030008.10	novel	1038	5	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	63.8957484240279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCAGGTTTGTGCCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	85428254	85423794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_85424280_85424502_85424671_85424917_85425028_85428094
Isoform_153467_5	chr6	-	875	4	NIC	ENSMUSG00000030008.10	novel	953	5	NA	NA	77	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	67.1830004953303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCAGGTTTGTGCCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	85428850	85423794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_85424280_85424502_85424671_85424917_85425028_85428738
Isoform_153468_3	chr6	-	846	4	FSM	ENSMUSG00000030008.10	ENSMUST00000113770.2	610	4	-11	-225	-3	0	multi-exon	FALSE	canonical	3	16	junction_1	62.7180640290782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428241	85423791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85424280_85424917_85425028_85425472_85425574_85428094
Isoform_153469_3	chr6	-	1252	4	FSM	ENSMUSG00000030008.10	ENSMUST00000146086.8	955	4	-76	-221	6	-3	multi-exon	FALSE	canonical	3	116	junction_3	20.8219969156552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCAGGTTTGTGCCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	85428259	85423794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85424671_85424917_85425028_85425472_85425574_85428094
Isoform_153470_3	chr6	-	1343	4	FSM	ENSMUSG00000030008.10	ENSMUST00000146086.8	955	4	-164	-224	-82	0	multi-exon	FALSE	canonical	3	116	junction_3	20.8219969156552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428347	85423791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85424671_85424917_85425028_85425472_85425574_85428094
Isoform_153471_4	chr6	-	1203	4	NIC	ENSMUSG00000030008.10	novel	1038	5	NA	NA	76	0	intron_retention	FALSE	canonical	3	68	junction_3	41.907305117631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428851	85423791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_85424671_85424917_85425028_85425472_85425574_85428738
Isoform_153472_9	chr6	-	1364	4	NIC	ENSMUSG00000030008.10	novel	955	4	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	19	junction_1	61.3858470840162	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428250	85423792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_85424790_85424917_85425028_85425472_85425574_85428094
Isoform_153473_4	chr6	-	1322	4	FSM	ENSMUSG00000030008.10	ENSMUST00000139875.8	1000	4	75	-397	75	-1	multi-exon	FALSE	canonical	3	19	junction_1	61.5593661074865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428852	85423792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85424790_85424917_85425028_85425472_85425574_85428738
Isoform_153474_3	chr6	-	2869	4	ISM	ENSMUSG00000047013.16	ENSMUST00000161546.2	6357	13	27418	962	27418	-962	3prime_fragment	FALSE	canonical	2	3	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAACATTA	NA	False	NA	NA	False	NA	NA	NA	85452422	85447523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_85450071_85450182_85450299_85452061_85452221_85452375
Isoform_153476_17	chr6	-	3100	4	FSM	ENSMUSG00000068299.12	ENSMUST00000095757.4	3019	4	-87	6	-87	-6	multi-exon	FALSE	canonical	2	6	junction_3	4.49691252107735	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGACTCGGGTGGATCT	NA	False	NA	NA	False	NA	NA	NA	85881953	85876038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85878596_85878934_85879080_85879173_85879312_85881693
Isoform_153479_134	chr6	-	4187	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	30	2218	5	-2218	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGATATTTAAGTATG	7350	False	NA	-13	True	AATAAA	-19	NA	85938619	85921467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
Isoform_153481_102	chr6	-	6428	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	4	3	4	-3	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGTGTACTATCTTGT	7324	False	NA	-1	True	NA	NA	NA	85938645	85919252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
Isoform_153485_13	chr6	-	4330	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	2	-2208	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	97.2756043922449	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTATGTTACATGATT	7322	False	NA	-3	True	AATAAA	-29	NA	85938647	85921457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85932383_85935565_85935698_85936197_85936274_85938419
Isoform_153486_9	chr6	-	6513	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	97.2756043922449	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGTGTACTATCTTGT	7344	False	NA	-1	True	NA	NA	NA	85938625	85919252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85932383_85935565_85935698_85936197_85936274_85938419
Isoform_153495_40	chr6	-	3315	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	16	964	3	-964	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGCTTTTTTCTAAT	NA	False	NA	-28	True	ATTAAA	-17	NA	86374120	86363951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
Isoform_153497_157	chr6	-	3161	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	49	1085	14	-1085	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCTGATTCTTAAAAA	NA	False	NA	-9	True	AATAAA	-10	NA	86374087	86364072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
Isoform_153499_12	chr6	-	3429	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	15	851	2	-851	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTACGGTGGATTTGTGC	NA	False	NA	85	True	AATATA	-14	NA	86374121	86363838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
Isoform_153501_7	chr6	-	4307	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	13	-25	0	25	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAAGTGTGAGCCCCT	NA	False	NA	NA	False	NA	NA	NA	86374123	86362962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
Isoform_153504_4	chr6	-	3442	5	NIC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	-6	-617	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	76.6823806359714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTCTCTTCTTTTTCT	NA	False	NA	-5	True	ATTAAA	-16	NA	86374107	86363604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86373954
Isoform_153505_4	chr6	-	3450	5	NIC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	16	-619	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	83.1910451911743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTCTCTTCTTTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	86374085	86363606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_86366354_86368657_86368811_86369118_86369331_86372895_86373103_86373954
Isoform_153508_20	chr6	-	2754	6	FSM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	-27	1939	-27	35	multi-exon	FALSE	canonical	3	13	junction_5	4.44522215417857	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTTTGTCTGGTCCTTG	3996	False	NA	NA	False	CATAAA	-22	NA	86646170	86625962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86645917
Isoform_153509_8	chr6	-	4659	6	FSM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	3	4	3	-4	multi-exon	FALSE	canonical	3	13	junction_5	4.44522215417857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTGGTCTTCCTGTGTC	4026	False	NA	NA	False	AATAAA	-15	NA	86646140	86624027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86645917
Isoform_153513_839	chr6	-	801	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	20	64	-11	-64	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATTTGACAAATATCT	7666	False	NA	-10	True	AATAAA	-22	NA	86661484	86652196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
Isoform_153515_34	chr6	-	868	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	4	13	-1	-13	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTTCTACACATAG	7650	False	NA	-12	True	ATTAAA	-16	NA	86661500	86652145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
Isoform_153524_785	chr6	-	2904	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	38	7	38	-7	multi-exon	FALSE	canonical	3	303	junction_7	38.1766371135774	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAATATGCTCCTGTTT	NA	False	NA	-25	True	AATAAA	-13	NA	86710327	86668756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
Isoform_153525_123	chr6	-	2926	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	16	7	16	-7	multi-exon	FALSE	canonical	3	303	junction_7	38.1766371135774	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAATATGCTCCTGTTT	NA	False	NA	-25	True	AATAAA	-13	NA	86710349	86668756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
Isoform_153536_19	chr6	-	2981	14	NIC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	102.041585675158	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTGTTTAAAGTGA	NA	False	NA	-18	True	AATAAA	-20	NA	86710331	86668749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694500_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
Isoform_153543_4	chr6	-	2049	14	NIC	ENSMUSG00000029994.18	novel	2002	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	61.8855595854728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTCTGATT	4626	False	NA	-1	True	ATTAAA	-19	NA	86770546	86713821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86751930_86751997_86770490
Isoform_153544_148	chr6	-	1982	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	21	-1	1	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTCTGATT	4627	False	NA	-1	True	ATTAAA	-19	NA	86770545	86713821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
Isoform_153547_3	chr6	-	2458	11	FSM	ENSMUSG00000030047.15	ENSMUST00000101197.9	2493	11	21	14	21	-14	multi-exon	FALSE	canonical	0	0	junction_4	1.26885775404495	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGAAAACAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	87473275	87436400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87437116_87439912_87440446_87442482_87442680_87443454_87443577_87444894_87444969_87447494_87447628_87453124_87453333_87465173_87465291_87469159_87469248_87472894_87473095_87473204
Isoform_153548_45	chr6	-	1941	10	NIC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	41	junction_3	13.2030673577893	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGATCTTCTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	87649130	87606727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
Isoform_153552_8	chr6	-	3668	6	ISM	ENSMUSG00000030051.11	ENSMUST00000032130.8	1889	11	-4	21340	-4	2	5prime_fragment	FALSE	canonical	3	57	junction_1	10.2489023802552	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTCTCTTATTTGA	NA	False	NA	NA	False	CATAAA	-19	NA	87649179	87628070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
Isoform_153554_11	chr6	-	1188	7	ISM	ENSMUSG00000089997.3	ENSMUST00000238521.2	3678	16	40	36434	40	-36434	5prime_fragment	TRUE	canonical	3	8	junction_6	5.95585612840188	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCACTTGTCCATCGACC	NA	False	NA	NA	False	ATTAAA	-15	NA	87699743	87689008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_87689250_87690283_87690357_87691104_87691249_87694858_87695064_87695769_87695958_87698819_87699089_87699675
Isoform_153555_19	chr6	-	4642	3	FSM	ENSMUSG00000030055.17	ENSMUST00000078647.11	4605	3	-50	13	-50	-1	multi-exon	FALSE	canonical	3	38	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGCTCAAGCATGGT	2644	False	NA	-6	True	ATTAAA	-14	NA	87788811	87765847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87769823_87771595_87771780_87788328
Isoform_153556_20	chr6	-	1352	3	FSM	ENSMUSG00000030055.17	ENSMUST00000078647.11	4605	3	-51	3304	-51	-5	multi-exon	FALSE	canonical	3	38	junction_1	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTGGTGCCGAGCCTTG	2643	False	NA	-1	True	TATAAA	-21	NA	87788812	87769138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87769823_87771595_87771780_87788328
Isoform_153559_147	chr6	-	1598	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	54	4185	3	3054	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATCTGTGCCTAG	NA	False	NA	NA	False	ATTAAA	-15	NA	87815726	87795435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
Isoform_153560_3	chr6	-	1510	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	-99	4426	-99	2813	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAAATTTAGAGACACAT	NA	False	NA	0	True	AATACA	-20	NA	87815879	87795676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
Isoform_153567_3	chr6	-	1555	10	NIC	ENSMUSG00000030056.9	novel	5837	11	NA	NA	-2	3058	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	90.9278645037366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTGTGCCTAGAGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	87815722	87795431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87811409_87811476_87811924_87811977_87812709_87812733_87815625
Isoform_153581_3897	chr6	-	1558	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	59	558	12	-91	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	3897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828029	87820154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
Isoform_153582_1957	chr6	-	1649	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	59	467	12	0	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	1957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828029	87820063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
Isoform_153596_448	chr6	-	1629	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	33	-1	12	1	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACAGTTTGGACTTT	NA	False	NA	-8	True	ATTAAA	-22	NA	87828029	87820062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
Isoform_153597_939	chr6	-	1537	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	33	91	12	-91	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828029	87820154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
Isoform_153598_138	chr6	-	1657	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	5	-1	5	1	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACAGTTTGGACTTT	NA	False	NA	-8	True	ATTAAA	-22	NA	87828057	87820062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
Isoform_153599_294	chr6	-	1569	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	1	91	1	-91	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828061	87820154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
Isoform_153606_124	chr6	-	1684	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	27	467	1	0	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828061	87820063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
Isoform_153607_989	chr6	-	1561	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	59	558	12	-91	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828029	87820154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
Isoform_153609_258	chr6	-	1600	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	27	551	1	-84	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTTCCTTTTGTTTGT	NA	False	NA	-30	True	AATAAA	-26	NA	87828061	87820147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
Isoform_15361_303	chr11	-	640	4	FSM	ENSMUSG00000020857.12	ENSMUST00000072566.5	734	4	97	-3	97	0	multi-exon	FALSE	canonical	3	6715	junction_3	620.302256072706	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	-28	True	NA	NA	NA	93846512	93840639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320
Isoform_153610_518	chr6	-	1652	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	59	467	12	0	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828029	87820063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
Isoform_153617_187	chr6	-	1630	5	NIC	ENSMUSG00000030057.16	novel	2178	5	NA	NA	14	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	5047.4819650495	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACAGTTTGGACTTT	NA	False	NA	-8	True	ATTAAA	-22	NA	87828027	87820062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_87821139_87822103_87822306_87822446_87822540_87822658_87822776_87827885
Isoform_153618_333	chr6	-	1540	5	NIC	ENSMUSG00000030057.16	novel	2178	5	NA	NA	12	-91	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	5047.4819650495	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828029	87820154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_87821139_87822103_87822306_87822446_87822540_87822658_87822776_87827885
Isoform_153632_204	chr6	-	2190	7	NIC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	10	4	combination_of_known_junctions	FALSE	canonical	3	112	junction_6	799.58419749823	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACAGCTGCTGTCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	88022203	87976094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
Isoform_153636_1245	chr6	-	2142	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	10	7	10	4	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACAGCTGCTGTCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	88022242	87976094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
Isoform_153637_1438	chr6	-	2113	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	39	7	0	4	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACAGCTGCTGTCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	88022213	87976094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
Isoform_153645_110	chr6	-	2645	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	32	2	-5	-2	multi-exon	TRUE	canonical	3	371	junction_3	47.1643108952333	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTGTGATCAAATGAC	NA	False	NA	-10	True	ATTAAA	-14	NA	88423489	88234317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_153646_909	chr6	-	2111	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	32	536	-5	3	multi-exon	FALSE	canonical	3	371	junction_3	47.1643108952333	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGTGCCCATAGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	88423489	88234851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_153647_67	chr6	-	2165	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	-22	536	-22	3	multi-exon	FALSE	canonical	3	371	junction_3	47.1643108952333	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGTGCCCATAGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	88423543	88234851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_15365_2559	chr11	-	628	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	383	1	-93	-1	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	2559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCAGTGTTCAGTACTC	NA	False	NA	-29	True	NA	NA	NA	93846702	93840640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
Isoform_153650_49	chr6	-	1470	6	NIC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	158.228189650264	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGTGCCCATAGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	88423508	88234851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_88235374_88258530_88258688_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_15367_119	chr11	-	756	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	256	0	-220	0	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	-28	True	NA	NA	NA	93846829	93840639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
Isoform_153670_4520	chr6	-	3076	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	70	26	-7	-26	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	4520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTCGTCATCTTTG	9165	False	NA	-21	True	AATAAA	-13	NA	88495817	88480586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
Isoform_153671_322	chr6	-	3113	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	34	25	32	-25	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTCGTCATCTTTGT	9129	False	NA	-20	True	AATAAA	-14	NA	88495853	88480585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
Isoform_153688_119	chr6	-	1539	8	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	2318	2	7	-2	3prime_fragment	FALSE	canonical	3	333	junction_3	29.2665442484229	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	9282	False	NA	-6	True	AATAAA	-19	NA	88816564	88812897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
Isoform_153689_241	chr6	-	1516	8	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	2342	1	31	-1	3prime_fragment	FALSE	canonical	3	333	junction_3	29.2665442484229	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	9306	False	NA	-5	True	AATAAA	-20	NA	88816540	88812896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
Isoform_153690_338	chr6	-	1824	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	21	0	3	0	multi-exon	FALSE	canonical	3	139	junction_10	111.135015794021	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	6985	False	NA	-4	True	AATAAA	-21	NA	88818861	88812895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
Isoform_153691_26	chr6	-	1939	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	-98	4	-14	-4	multi-exon	FALSE	canonical	3	139	junction_10	111.135015794021	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCTGAGCCTGTTGTTG	6866	False	NA	-8	True	AATAAA	-17	NA	88818980	88812899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
Isoform_153693_29	chr6	-	1789	12	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	132.928800926295	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	6985	False	NA	-4	True	AATAAA	-21	NA	88818861	88812895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817854_88817883_88818750
Isoform_153701_42	chr6	-	2060	8	FSM	ENSMUSG00000033152.14	ENSMUST00000145944.3	2065	8	26	-21	26	0	multi-exon	FALSE	canonical	2	3	junction_6	2.71804251292006	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCACGCCTGTTTTTTGCC	NA	False	NA	NA	False	ATTAAA	-28	NA	88852000	88819539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88819959_88820488_88820669_88822047_88822110_88822514_88822672_88825716_88825792_88826176_88826971_88841998_88842272_88851900
Isoform_153737_8661	chr6	-	3269	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	102	0	-1	0	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	8661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875660	88860455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
Isoform_153740_325	chr6	-	3360	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	11	0	11	0	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875751	88860455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
Isoform_153759_4	chr6	-	1696	2	FSM	ENSMUSG00000090013.2	ENSMUST00000159767.2	652	2	-3	-1041	-3	1041	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTCTTGTCTCATTT	NA	False	NA	NA	False	AATAAA	-13	NA	89163010	89160612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_89162143_89162844
Isoform_15377_2191	chr11	-	679	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	250	2252	1	241	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTGCTGTACAGCTC	635	False	NA	-15	True	ATTAAA	-16	NA	93859097	93850056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
Isoform_15378_344	chr11	-	985	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	249	1947	0	546	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTGGCCCAGGCCTG	634	False	NA	-5	True	AATAAA	-13	NA	93859098	93849751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
Isoform_153781_135	chr6	-	9032	32	FSM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	1	1	1	-1	multi-exon	FALSE	canonical	3	115	junction_30	20.9222334925891	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCGTGGCTCTGAGTCT	8991	False	NA	-3	True	AATAAA	-34	NA	89339601	89293296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
Isoform_153783_287	chr6	-	1101	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	16	4	16	-4	multi-exon	FALSE	canonical	3	184	junction_4	25.4486277245203	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGGCACCCAGTCACT	NA	False	NA	-9	True	AATAAA	-28	NA	89572618	89360136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
Isoform_153785_18	chr6	-	995	7	FSM	ENSMUSG00000030086.17	ENSMUST00000113550.6	1042	7	38	9	-3	-4	multi-exon	FALSE	canonical	3	15	junction_3	87.7648373021147	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGGCACCCAGTCACT	NA	False	NA	-9	True	AATAAA	-28	NA	89572596	89360136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89544568_89544714_89546324_89546395_89551349_89551573_89572440
Isoform_153786_7	chr6	-	5678	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	20	625	intron_retention	FALSE	canonical	2	9	junction_13	9.75195322568645	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCGGCTTTTTTTTTTTTC	NA	False	NA	23	True	ATTAAA	-3	NA	90693491	90637337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
Isoform_153787_16	chr6	-	5562	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-101	599	intron_retention	FALSE	canonical	3	17	junction_13	8.16689811691508	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTGGAGTGGTAACAT	2746	False	NA	-3	True	AATACA	-19	NA	90713770	90637363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
Isoform_153788_3	chr6	-	3270	12	ISM	ENSMUSG00000034312.16	ENSMUST00000101153.10	8036	14	113	11477	113	2844	5prime_fragment	FALSE	canonical	2	9	junction_11	10.0494644403167	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGAGCCGCTGGGCCTT	NA	False	NA	NA	False	AATGAA	-17	NA	90693398	90644546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
Isoform_153789_10	chr6	-	3279	12	NIC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	-110	2841	intron_retention	FALSE	canonical	3	17	junction_11	8.08835506164917	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTACTGAGCCGCTGGGC	2737	False	NA	NA	False	AATGAA	-14	NA	90713779	90644549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
Isoform_15379_313	chr11	-	729	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	199	2253	-50	240	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATTGCTGTACAGCT	584	False	NA	-16	True	ATTAAA	-15	NA	93859148	93850057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
Isoform_15382_42	chr11	-	1034	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	200	1947	-49	546	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTGGCCCAGGCCTG	585	False	NA	-5	True	AATAAA	-13	NA	93859147	93849751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
Isoform_153837_498	chr6	-	7009	40	FSM	ENSMUSG00000030091.18	ENSMUST00000032179.14	7037	40	26	2	-7	0	multi-exon	FALSE	non_canonical	3	302	junction_34	44.9993644487226	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093785	90990051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
Isoform_153838_11	chr6	-	7267	40	FSM	ENSMUSG00000030091.18	ENSMUST00000032179.14	7037	40	-231	1	-231	-1	multi-exon	FALSE	non_canonical	3	302	junction_34	44.9993644487226	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATGCGGTGGTTCTTGGG	NA	False	NA	-3	True	AATAAA	-19	NA	91094042	90990050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
Isoform_153845_372	chr6	-	1256	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	112	2104	15	-2104	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGGCTTTTTTTTC	NA	False	NA	-1	True	ATTAAA	-21	NA	91450416	91441257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_91442296_91444664_91444764_91450297
Isoform_153846_283	chr6	-	1344	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	23	2105	23	-2105	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATGGCTTTTTTTT	NA	False	NA	-2	True	ATTAAA	-20	NA	91450505	91441258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_91442296_91444664_91444764_91450297
Isoform_153862_210	chr6	-	3609	16	FSM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	21	4	17	-4	multi-exon	FALSE	canonical	3	81	junction_2	18.0017283120878	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCCTGGCTGCAAATT	390	False	NA	-4	True	AATAAA	-12	NA	91492849	91466290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
Isoform_153870_25	chr6	-	2399	10	ISM	ENSMUSG00000030094.9	ENSMUST00000150279.3	4347	13	-72	5438	17	-5438	5prime_fragment	FALSE	canonical	3	87	junction_8	18.5099239315189	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGTAGAAGTGTTCCT	390	False	NA	NA	False	AATAAA	-20	NA	91492849	91474692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
Isoform_153872_10	chr6	-	2079	9	ISM	ENSMUSG00000030094.9	ENSMUST00000150279.3	4347	13	-87	6847	2	-6847	5prime_fragment	FALSE	canonical	3	87	junction_7	19.6273883896967	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTTTTCTATTTATTTG	375	False	NA	NA	False	AATATA	-22	NA	91492864	91476101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
Isoform_153874_14	chr6	-	1884	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	43	4146	-19	1167	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTCCTGACCCTTGT	NA	False	NA	0	True	AATAAA	-35	NA	92160971	92150651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
Isoform_153875_341	chr6	-	731	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	32	5310	-30	3	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTAAGTGTGGCCTTGC	NA	False	NA	-6	True	AATAAA	-19	NA	92160982	92151815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
Isoform_153878_19	chr6	-	1448	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	29	4596	29	717	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCCAAGACTCTTTA	NA	False	NA	-6	True	AATAAA	-14	NA	92160985	92151101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
Isoform_153883_7	chr6	-	5063	12	NIC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-20	-9	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	36.6012690020713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGGACTTGTGTGTGC	NA	False	NA	-8	True	ATTAAA	-43	NA	92191850	92163701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_92167234_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
Isoform_153886_119	chr6	-	5278	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	56	0	-20	0	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGTGCTTAAAACGT	NA	False	NA	1	True	ATTAAA	-24	NA	92191850	92163692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
Isoform_15389_17	chr11	-	1993	12	FSM	ENSMUSG00000020863.16	ENSMUST00000166312.8	5244	12	2	3249	2	0	multi-exon	FALSE	canonical	3	40	junction_1	82.4268270539502	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212782	94181964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94182405_94183752_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_153891_91	chr6	-	1381	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	3	0	3	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	-13	True	AATAAA	-15	NA	92221628	92219041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92220107_92220652_92220869_92221528
Isoform_153892_23	chr6	-	1439	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	-55	0	-55	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	-13	True	AATAAA	-15	NA	92221686	92219041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92220107_92220652_92220869_92221528
Isoform_153893_16	chr6	-	1497	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	-113	0	-113	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	-13	True	AATAAA	-15	NA	92221744	92219041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92220107_92220652_92220869_92221528
Isoform_153895_7	chr6	-	8162	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	15	-4469	15	-5	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAATGTTGTCATTCTT	NA	False	NA	-23	True	AATAAA	-10	NA	92458358	92347895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
Isoform_153897_7	chr6	-	7893	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113446.8	7860	8	-42	9	-42	-9	multi-exon	FALSE	canonical	2	9	junction_7	6.08779307218929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGGAATGTTGTCAT	NA	False	NA	-27	True	AATAAA	-6	NA	92511884	92347899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92511596
Isoform_153898_14	chr6	-	4939	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113446.8	7860	8	-42	2963	-42	1511	multi-exon	FALSE	canonical	2	9	junction_7	6.08779307218929	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATATGCAGCACTGTG	NA	False	NA	NA	False	AATAAA	-24	NA	92511884	92350853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92511596
Isoform_153899_4	chr6	-	3125	7	ISM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	15	34504	15	-34504	5prime_fragment	FALSE	canonical	3	6	junction_6	7.33522702822179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACAGTG	NA	False	NA	NA	False	NA	NA	NA	92458358	92386868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
Isoform_15390_143	chr11	-	1914	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	59	77	29	1	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGATTGTCTGTGTCATT	NA	False	NA	-4	True	AATAAA	-24	NA	94212755	94181963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_153900_8	chr6	-	8046	40	FSM	ENSMUSG00000030022.15	ENSMUST00000113438.8	8016	40	-38	8	-38	-5	multi-exon	FALSE	canonical	2	6	junction_11	5.38656863230259	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATAGATGCTTCTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	92920511	92749687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92800327_92800496_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
Isoform_153901_3	chr6	-	5151	23	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	3	14	junction_6	7.90386452187569	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTTTTGAAAATTATT	NA	False	NA	0	True	ATTAAA	-20	NA	94260876	93655015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671190_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184_93920302_94259990
Isoform_153902_4	chr6	-	5271	24	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_10	9.74883057307558	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTTTTTGAAAATTAT	NA	False	NA	-1	True	ATTAAA	-19	NA	94260910	93655016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184_93920302_94259990
Isoform_153903_4	chr6	-	5169	23	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	7.90386452187569	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTTTTGAAAATTATT	NA	False	NA	0	True	ATTAAA	-20	NA	94260891	93655015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184_93920302_94259990
Isoform_153904_3	chr6	-	2660	6	ISM	ENSMUSG00000045095.17	ENSMUST00000203519.3	3920	21	-1	89552	-1	1053	5prime_fragment	FALSE	canonical	3	24	junction_5	8.05977667184395	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGTTCAAGTGGAAAT	NA	False	NA	NA	False	AATAAA	-28	NA	94260877	93749543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184_93920302_94259990
Isoform_153905_5	chr6	-	1813	5	ISM	ENSMUSG00000045095.17	ENSMUST00000203519.3	3920	21	-1	102154	-1	138	5prime_fragment	FALSE	canonical	3	24	junction_4	8.95474734428616	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATAAATTGTTGGCAT	NA	False	NA	NA	False	AATAAA	-23	NA	94260877	93762145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_93762628_93769327_93769535_93792686_93792807_93920184_93920302_94259990
Isoform_15391_11	chr11	-	5158	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	59	-3167	29	-4	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACTTGGTGTAGGTA	NA	False	NA	NA	False	AATAAA	-20	NA	94212755	94178719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_153911_128	chr6	-	4976	19	FSM	ENSMUSG00000030029.15	ENSMUST00000101126.3	4951	19	-22	-3	-1	1	multi-exon	FALSE	canonical	3	92	junction_14	16.0804305574689	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGTGCGGCGGTCA	6738	False	NA	NA	False	AATAAA	-17	NA	94677140	94581513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
Isoform_153912_97	chr6	-	5025	19	FSM	ENSMUSG00000030029.15	ENSMUST00000101126.3	4951	19	-67	-7	-46	0	multi-exon	FALSE	canonical	3	92	junction_14	16.0804305574689	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCGGCGGTCACTGC	6693	False	NA	NA	False	AATAAA	-21	NA	94677185	94581509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
Isoform_153913_22	chr6	-	5081	19	FSM	ENSMUSG00000030029.15	ENSMUST00000101126.3	4951	19	-123	-7	-102	0	multi-exon	FALSE	canonical	3	92	junction_14	16.0804305574689	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCGGCGGTCACTGC	6637	False	NA	NA	False	AATAAA	-21	NA	94677241	94581509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
Isoform_153915_6	chr6	-	4871	18	NIC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-47	-1	intron_retention	FALSE	canonical	3	8	junction_2	29.2854936514361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTAAGTGTGTGCGGCG	6692	False	NA	NA	False	AATAAA	-13	NA	94677186	94581517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_94582985_94583083_94583345_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
Isoform_15392_5	chr11	-	2460	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	25	-435	-5	435	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCAGCATGTTTGTATC	NA	False	NA	NA	False	NA	NA	NA	94212789	94181451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_153924_1912	chr6	-	2229	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	1	1137	1	-4	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTCACAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	95695780	95451126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
Isoform_153925_90	chr6	-	2279	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	-49	1137	-49	-4	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTCACAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	95695830	95451126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
Isoform_153939_5	chr6	-	2184	6	FSM	ENSMUSG00000046500.9	ENSMUST00000089295.6	2190	6	0	6	0	-6	multi-exon	FALSE	canonical	1	3	junction_3	2.56124969497314	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGATCTTGTGATTAT	NA	False	NA	-34	True	AGTAAA	-20	NA	97037374	96808169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_96809534_96820711_96820837_96840720_96840877_96991332_96991449_96996875_96997016_97037091
Isoform_15394_4	chr11	-	3288	11	FSM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	85	0	-8	0	multi-exon	FALSE	canonical	3	68	junction_1	62.20843994186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212729	94181964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_153941_9	chr6	-	3973	19	NIC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_17	11.1428712748068	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGAACATCTTCAGGA	NA	False	NA	-7	True	AATAAA	-21	NA	97125875	97086985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97124970_97125151_97125220_97125792
Isoform_153943_24	chr6	-	4129	18	FSM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	297	-2	-2	2	multi-exon	FALSE	canonical	3	33	junction_9	6.4238957016875	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACATCTTCAGGATTT	NA	False	NA	-4	True	AATAAA	-24	NA	97125846	97086982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
Isoform_153947_14	chr6	-	5585	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-20	167	-20	-167	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTTTCAACTTACTT	7448	False	NA	NA	False	AATAAA	-22	NA	97156103	97130124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
Isoform_153948_94	chr6	-	4265	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-10	1477	-10	792	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTCAATTTACTCT	7458	False	NA	-2	True	AATAAA	-22	NA	97156093	97131434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
Isoform_153953_6	chr6	-	4437	18	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-10	984	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	25.4208861625081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAGTAGTAGTGTA	7458	False	NA	NA	False	AATAAA	-9	NA	97156093	97131242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97132021_97132040_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
Isoform_153955_9	chr6	-	4637	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-10	793	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	24.0142373135188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTCAATTTACTCTT	7458	False	NA	-1	True	AATAAA	-23	NA	97156093	97131433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155471
Isoform_153965_493	chr6	-	2172	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	86	-1	-1	1	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTAAAGTATATCAATA	NA	False	NA	-6	True	AATAAA	-25	NA	97182522	97160966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
Isoform_153966_30	chr6	-	2208	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	50	-1	-29	1	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTAAAGTATATCAATA	NA	False	NA	-6	True	AATAAA	-25	NA	97182558	97160966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
Isoform_153967_69	chr6	-	2225	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	81	-49	-1	49	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTTAAATGTTTAC	NA	False	NA	42	True	AGTAAA	-21	NA	97182527	97160918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
Isoform_153969_26	chr6	-	2373	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	81	-197	-1	8	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCAAGTCTCTCTCTTAG	NA	False	NA	-10	True	AGTAAA	-25	NA	97182527	97160770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
Isoform_153978_117	chr6	-	2152	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-24	337	-16	0	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182545	97160967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
Isoform_153979_17	chr6	-	2183	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-6	288	-1	49	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTTAAATGTTTAC	NA	False	NA	42	True	AGTAAA	-21	NA	97182527	97160918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
Isoform_15398_9	chr11	-	3562	11	NNC	ENSMUSG00000020863.16	novel	3478	10	NA	NA	29	-3	intron_retention	FALSE	canonical	3	14	junction_5	100.65689246147	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTTGATTGTCTGTGT	NA	False	NA	-8	True	AATAAA	-20	NA	94212755	94181967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94189775_94189922_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_153983_10	chr6	-	2712	17	NNC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	170.144320633249	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182487	97160967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181875
Isoform_153984_12	chr6	-	2578	18	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	169.693882744283	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTAAAGTATATCAATA	NA	False	NA	-6	True	AATAAA	-25	NA	97182537	97160966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181875_97182309_97182493
Isoform_15399_68	chr11	-	3418	10	FSM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	59	1	29	-1	multi-exon	FALSE	canonical	3	230	junction_9	26.1850018328748	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGATTGTCTGTGTCA	NA	False	NA	-6	True	AATAAA	-22	NA	94212755	94181965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_153990_3	chr6	-	2220	4	NNC	ENSMUSG00000044086.9	novel	2215	3	NA	NA	-444	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGTCGAGCCCCCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	97230164	97215494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97215833_97224130_97225526_97229238_97229557_97229995
Isoform_153994_4	chr6	-	4196	13	NNC	ENSMUSG00000030064.17	novel	3996	13	NA	NA	18	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	16.9377946878833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTGGATGCTTGTGTT	NA	False	NA	1	True	AATAAA	-21	NA	97289323	97263825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97288854
Isoform_153995_4	chr6	-	4208	18	ISM	ENSMUSG00000030064.17	ENSMUST00000113359.8	4311	23	105118	-222	9	1	3prime_fragment	FALSE	canonical	3	12	junction_16	18.7524392876968	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTTTGGATGCTTGTGT	NA	False	NA	0	True	AATAAA	-20	NA	97331129	97263826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965
Isoform_153996_7	chr6	-	4462	20	NIC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_19	20.0048470580801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	7448	False	NA	-1	True	AATAAA	-19	NA	97373663	97263827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97373386
Isoform_153997_3	chr6	-	4767	24	FSM	ENSMUSG00000030064.17	ENSMUST00000113355.9	4913	24	-66	212	-66	3	multi-exon	TRUE	canonical	0	0	junction_20	23.7882911898179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTCATTTGTATCACT	NA	False	NA	NA	False	CATAAA	-19	NA	97594568	97264039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97389448_97389542_97398522_97398618_97400419_97400486_97505690_97505813_97594150
Isoform_153999_3	chr6	-	4277	20	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	-475	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	20.9054062644172	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	6939	False	NA	-1	True	AATAAA	-19	NA	97374172	97263827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97374080
Isoform_154_10	ERCC-00130	-	286	1	Antisense	novelGene_ERCC-00130A_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	288	2	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_ERCC-00130_-_0_300
Isoform_1540_995	chr10	-	1759	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	181	0	181	0	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	-9	True	AATAAA	-45	NA	5755419	5749159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
Isoform_15400_5	chr11	-	6664	10	FSM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	59	-3245	29	-4	multi-exon	FALSE	canonical	3	230	junction_9	26.1850018328748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACTTGGTGTAGGTA	NA	False	NA	NA	False	AATAAA	-20	NA	94212755	94178719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_154000_44	chr6	-	3827	13	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_12	12.9871731591854	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	97289389	97263827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97289287
Isoform_154002_12	chr6	-	3863	13	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	1319	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	14.4366431924692	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	97288022	97263827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97287884
Isoform_154004_5	chr6	-	3841	13	NNC	ENSMUSG00000030064.17	novel	3996	13	NA	NA	1319	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	16.6839493725756	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACGTGTTTGGATGCTT	NA	False	NA	-4	True	AATAAA	-16	NA	97288022	97263830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97287903
Isoform_154005_4	chr6	-	2715	15	FSM	ENSMUSG00000030067.18	ENSMUST00000177229.8	1848	15	-45	-822	9	-79	multi-exon	FALSE	canonical	3	13	junction_6	4.40315285926355	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTCTGTAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	99005265	98906228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
Isoform_154006_3	chr6	-	2518	7	FSM	ENSMUSG00000093661.2	ENSMUST00000032151.3	2515	7	0	-3	0	3	multi-exon	FALSE	canonical	1	1	junction_6	2.11476292340825	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTCATGTTAATGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	99643732	99602092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99643588
Isoform_154008_6	chr6	-	4644	4	ISM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	496	0	-241	0	3prime_fragment	FALSE	canonical	3	293	junction_2	5.79271573232759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100263950	100205525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443
Isoform_154009_8	chr6	-	4221	4	ISM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	919	0	182	0	3prime_fragment	FALSE	canonical	3	293	junction_2	5.79271573232759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100263527	100205525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443
Isoform_154010_24	chr6	-	4358	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	29	116	29	-116	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCATGTGCACGACTGT	NA	False	NA	NA	False	AATAAA	-22	NA	100264417	100205641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
Isoform_154012_79	chr6	-	1178	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	27	3298	27	148	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAACTGGTTTTGTTTCT	NA	False	NA	NA	False	TATAAA	-33	NA	100264419	100208823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
Isoform_154013_40	chr6	-	1373	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	27	3103	27	343	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATCCATGGCAACGCT	NA	False	NA	NA	False	NA	NA	NA	100264419	100208628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
Isoform_154017_3	chr6	-	4405	5	NNC	ENSMUSG00000072872.4	novel	4503	5	NA	NA	334	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	126.250742572074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100264112	100205525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100263970
Isoform_154018_4	chr6	-	4544	6	NNC	ENSMUSG00000072872.4	novel	4503	5	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	134.947397159041	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAGATGATTATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	100264417	100205526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_100209387_100209827_100209927_100210023_100210201_100229879_100229951_100263443_100263570_100264206
Isoform_154020_425	chr6	-	1993	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	-2	-1	-2	1	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGTGTAAATAATTAGAA	NA	False	NA	-1	True	AATAAA	-19	NA	100648120	100550041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
Isoform_154021_16	chr6	-	2667	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	-3	-674	-3	674	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTCTGTGTGCACATA	NA	False	NA	NA	False	NA	NA	NA	100648121	100549368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
Isoform_154026_28	chr6	-	4208	10	FSM	ENSMUSG00000035357.18	ENSMUST00000075994.11	4104	10	-109	5	-109	-5	multi-exon	FALSE	canonical	3	11	junction_6	4.85340659285368	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	-9	True	AATAAA	-19	NA	101354967	101126574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101331354_101331463_101339099_101339187_101354126
Isoform_154029_5	chr6	-	3341	8	NNC	ENSMUSG00000035357.18	novel	1808	8	NA	NA	61926	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.39095723176481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	-9	True	AATAAA	-19	NA	101270045	101126574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101269876
Isoform_154030_6	chr6	-	3282	8	NNC	ENSMUSG00000035357.18	novel	1808	8	NA	NA	61985	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.39095723176481	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	-9	True	AATAAA	-19	NA	101269986	101126574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101269876
Isoform_154032_65	chr6	-	2066	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	6	0	2	0	multi-exon	FALSE	canonical	3	47	junction_10	56.1066840937869	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	False	NA	-33	True	AATAAA	-17	NA	106777020	106757161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
Isoform_154033_16	chr6	-	4020	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	6	-1954	2	1954	multi-exon	FALSE	canonical	3	47	junction_10	56.1066840937869	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTATCTCAGAATTTC	NA	False	NA	-4	True	AATAAA	-25	NA	106777020	106755207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
Isoform_154035_187	chr6	-	2066	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	15	3	2	-3	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCTGCTCCTTAATGTC	NA	False	NA	-36	True	AATAAA	-14	NA	106777020	106757164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
Isoform_154036_33	chr6	-	4022	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	15	-1953	2	1953	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTTTATCTCAGAATTT	NA	False	NA	-5	True	AATAAA	-24	NA	106777020	106755208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
Isoform_154038_5	chr6	-	2577	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	-15	-478	-12	478	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCCTCCTGTTATTCC	NA	False	NA	NA	False	TATAAA	-16	NA	106777050	106756683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
Isoform_154041_4	chr6	-	1451	5	FSM	ENSMUSG00000005362.15	ENSMUST00000147087.2	2784	5	0	1333	0	-1333	multi-exon	FALSE	canonical	3	193	junction_4	25.0099980007996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGGTTTTTTTAGTA	NA	False	NA	NA	False	AATAAA	-19	NA	106777022	106767041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
Isoform_154043_114	chr6	-	2586	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	7	0	7	0	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTTCACTTTTTCAT	2479	False	NA	NA	False	AATAAA	-15	NA	108162536	108083988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
Isoform_154046_5	chr6	-	780	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9168	112	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	9.35414346693485	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGAAGTCTTGTGTCA	NA	False	NA	-7	True	AATAAA	-14	NA	108600124	108587181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_108587583_108589268_108589394_108590092_108590176_108590909_108590955_108599998
Isoform_154047_5	chr6	-	766	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9171	115	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	14.0779082253011	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTCTTGTGTCAGTA	NA	False	NA	-4	True	AATAAA	-17	NA	108600127	108587178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_108587583_108589268_108589374_108590092_108590176_108590909_108590955_108599998
Isoform_154049_9	chr6	-	2644	14	FSM	ENSMUSG00000030254.17	ENSMUST00000068487.12	2577	14	0	-67	0	37	multi-exon	FALSE	canonical	3	29	junction_4	88.4665550417034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGCATTTGTCATAAAA	NA	False	NA	-42	True	AATAGA	-15	NA	112673631	112596868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_154050_51	chr6	-	2544	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	38	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCATTTGTCATAAAAT	NA	False	NA	-41	True	AATAGA	-16	NA	112673608	112596867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_154055_5	chr6	-	4840	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	2239	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	112673608	112594571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_154056_7	chr6	-	2616	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	4	-19	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	87.4748773458224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTATTTCCCAGTTTT	NA	False	NA	-3	True	CATAAA	-21	NA	112673627	112596829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_112597866_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_154057_48	chr6	-	2515	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	39	23	1	-23	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCTTTATTTCCCAG	NA	False	NA	-7	True	CATAAA	-17	NA	112673608	112596833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_154061_13	chr6	-	6750	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	39	-4212	1	4212	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	112673608	112592598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_154063_25	chr6	-	3670	13	ISM	ENSMUSG00000030254.17	ENSMUST00000068487.12	2577	14	23	6441	1	-1	5prime_fragment	FALSE	canonical	3	29	junction_3	81.0826053410279	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTGTTGTTGTTGT	NA	False	NA	-5	True	AATAAA	-19	NA	112673608	112603376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_112605486_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_154064_221	chr6	-	3593	12	NIC	ENSMUSG00000030254.17	novel	3535	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673608	112603375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_15407_17	chr11	-	866	7	ISM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	20	6627	-10	-710	5prime_fragment	FALSE	canonical	3	230	junction_6	23.7164968370588	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAAGTAAGTTTTTCGT	NA	False	NA	NA	False	ATTAAA	-15	NA	94212794	94188591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_154070_3	chr6	-	5193	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	-47	3741	-47	-3738	multi-exon	TRUE	canonical	3	12	junction_1	6.19450418404635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCCTCGTTCTACT	6406	False	NA	NA	False	NA	NA	NA	112924274	112698672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
Isoform_154071_32	chr6	-	4455	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	2	4430	2	-4427	multi-exon	FALSE	canonical	3	12	junction_1	6.19450418404635	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTACGTATGTGTCTGTA	6455	False	NA	NA	False	NA	NA	NA	112924225	112699361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
Isoform_154072_11	chr6	-	3414	20	ISM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	-44	11636	-44	9418	5prime_fragment	FALSE	canonical	3	14	junction_14	5.12989176042577	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATTTGCTTGTTTGTGT	6409	False	NA	NA	False	NA	NA	NA	112924271	112706567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
Isoform_154074_25	chr6	-	1051	2	FSM	ENSMUSG00000086429.10	ENSMUST00000159544.3	822	2	144	-373	2	-3	multi-exon	FALSE	canonical	3	30	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGGAATGACTTTTT	NA	False	NA	-3	True	NA	NA	NA	113054150	113047361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113048397_113054134
Isoform_154075_3	chr6	-	4721	4	FSM	ENSMUSG00000042873.12	ENSMUST00000162280.2	4762	4	42	-1	42	1	multi-exon	FALSE	canonical	1	2	junction_1	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGCTGGCTGCTGCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	113172303	113145049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113148920_113153406_113153644_113170778_113171265_113172175
Isoform_154077_118	chr6	-	1453	12	FSM	ENSMUSG00000030272.16	ENSMUST00000032409.15	1496	12	33	10	12	3	multi-exon	FALSE	canonical	3	50	junction_1	8.10570659096682	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGACAGTTCCGTTTG	5826	False	NA	NA	False	AATAAA	-10	NA	113320912	113311094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
Isoform_154084_70	chr6	-	2239	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	39	6	intron_retention	FALSE	canonical	3	134	junction_9	97.0713114476818	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCACCCGCAAGTTT	NA	False	NA	-14	True	AATAAA	-42	NA	113354805	113343609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
Isoform_154087_118	chr6	-	1764	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-10	-11	combination_of_known_junctions	FALSE	canonical	3	134	junction_9	97.0713114476818	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354347	113343626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
Isoform_154093_45	chr6	-	1736	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_9	124.029068675626	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354482	113343615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354450
Isoform_154096_26	chr6	-	1820	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	387	641	21	-11	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354457	113343626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
Isoform_154097_16	chr6	-	2168	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	39	641	39	-11	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354805	113343626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
Isoform_154098_358	chr6	-	1710	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	497	641	-10	-11	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354347	113343626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
Isoform_154105_14	chr6	-	1546	8	NIC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	-10	11	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	135.189662688976	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCGCAAGTTTAGTAT	NA	False	NA	-9	True	TATAAA	-4	NA	113354347	113343604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113344142_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
Isoform_154106_29	chr6	-	1238	9	FSM	ENSMUSG00000051169.15	ENSMUST00000060634.14	1224	9	-16	2	-4	-2	multi-exon	FALSE	canonical	3	27	junction_2	50.3374549912885	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAGAAAGCAGATGTTTA	NA	False	NA	-20	True	AATAAA	-30	NA	113396296	113392291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113392684_113393267_113393394_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_154109_6	chr6	-	1232	9	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-4	5	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	58.2880776831763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGATGTTTACCAAGGA	NA	False	NA	-13	True	AATAAA	-37	NA	113396296	113392284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395884_113396178
Isoform_154110_248	chr6	-	1257	9	FSM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	5	7	-4	3	multi-exon	FALSE	canonical	3	151	junction_2	15.858258889298	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAGATGTTTACCAAG	NA	False	NA	-15	True	AATAAA	-35	NA	113396296	113392286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_154112_11	chr6	-	1336	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	151	junction_2	16.318263212907	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATGTTTACCAAGGACT	NA	False	NA	-11	True	AATAAA	-39	NA	113396293	113392282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_154114_4	chr6	-	1600	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-4	4	intron_retention	FALSE	canonical	3	157	junction_7	15.0373684193609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGATGTTTACCAAGG	NA	False	NA	-14	True	AATAAA	-36	NA	113396296	113392285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113392684_113393267_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_154115_6	chr6	-	1102	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	61.7423877816496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAGAAAGCAGATGTT	NA	False	NA	-22	True	AATAAA	-28	NA	113396288	113392293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113392684_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_154117_5	chr6	-	3726	4	NIC	ENSMUSG00000045009.10	novel	3424	4	NA	NA	-28	-9	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGATTTATTTTATGTGT	4257	False	NA	NA	False	TTTAAA	-13	NA	113478920	113470608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113473027_113473892_113474046_113474232_113475278_113478810
Isoform_154119_3	chr6	-	3606	4	NIC	ENSMUSG00000045009.10	novel	3424	4	NA	NA	-187	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGCCTCGCTCTGGTC	4098	False	NA	-1	True	AATAAA	-16	NA	113479079	113470887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113473027_113473892_113474046_113474232_113475278_113478810
Isoform_154120_15	chr6	-	3397	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	26	1	-12	-1	multi-exon	FALSE	canonical	3	8	junction_1	2.62466929133727	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCGCTCTGGTCA	4311	False	NA	0	True	AATAAA	-17	NA	113478866	113470886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113473027_113473892_113474049_113474232_113475278_113478810
Isoform_154121_12	chr6	-	3449	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	-26	1	-26	-1	multi-exon	FALSE	canonical	3	8	junction_1	2.62466929133727	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCGCTCTGGTCA	4259	False	NA	0	True	AATAAA	-17	NA	113478918	113470886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113473027_113473892_113474049_113474232_113475278_113478810
Isoform_154122_4	chr6	-	3476	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204268.3	3741	4	-24	289	-14	-3	multi-exon	FALSE	canonical	2	4	junction_3	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCATGCCTCGCTCTGGT	4309	False	NA	-2	True	AATAAA	-15	NA	113478868	113470888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113473027_113473892_113474049_113474232_113475357_113478810
Isoform_154124_6	chr6	-	1929	3	FSM	ENSMUSG00000045009.10	ENSMUST00000205170.2	1903	3	-44	18	0	14	multi-exon	FALSE	canonical	3	13	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTTTGTTTGGGGT	4285	False	NA	NA	False	NA	NA	NA	113478892	113473246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113474049_113474232_113475278_113478810
Isoform_154126_638	chr6	-	1961	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	18	6	-16	-6	multi-exon	FALSE	canonical	3	306	junction_2	13.3386044002714	638	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAAGTGTTGCTTCTGTG	NA	False	NA	-4	True	ATTAAA	-23	NA	113508595	113491840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
Isoform_15413_38	chr11	-	1131	4	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40890	0	-900	0	intron_retention	FALSE	canonical	3	69	junction_3	10.6249183003395	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	5	True	NA	-4	True	AATAAA	-17	NA	94242912	94234120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624
Isoform_154139_1400	chr6	-	1302	9	FSM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	44	7	28	-7	multi-exon	FALSE	canonical	3	942	junction_8	78.4968152220203	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTACTGTCATCCCACA	2221	False	NA	-17	True	AATAAA	-16	NA	113717660	113705029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
Isoform_15414_3	chr11	-	3519	4	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40830	-2328	-960	2328	intron_retention	FALSE	canonical	3	69	junction_3	10.6249183003395	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTAAGTTTCTTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	94242972	94231792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624
Isoform_154141_32	chr6	-	1615	8	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	29	-8	intron_retention	FALSE	canonical	3	942	junction_7	83.0657472568985	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTACTGTCATCCCAC	2222	False	NA	-18	True	AATAAA	-15	NA	113717659	113705030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113705425_113706556_113706704_113707295_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
Isoform_154144_6	chr6	-	4401	23	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	7.70799734953872	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTCCAAAACATAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	113868329	113725259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
Isoform_154145_8	chr6	-	6984	23	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	43	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	7.70799734953872	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATGCAATGGTTATG	NA	False	NA	-6	True	AATAAA	-24	NA	113868288	113722635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
Isoform_154147_25	chr6	-	2371	12	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	8	13872	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	6.72972928120791	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCAGTCTGTAA	NA	False	NA	NA	False	AATAAA	-27	NA	113868323	113766426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
Isoform_154149_5	chr6	-	2327	11	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	0	13862	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	9.96192752432982	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGGGACATGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	113868331	113766436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113766957_113770626_113770842_113773199_113773359_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
Isoform_15415_32	chr11	-	1072	5	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40827	0	-963	0	3prime_fragment	FALSE	canonical	3	20	junction_4	28.5164426252645	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	NA	False	NA	-4	True	AATAAA	-17	NA	94242975	94234120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905
Isoform_154150_5	chr6	-	2207	9	ISM	ENSMUSG00000030302.18	ENSMUST00000205052.3	5658	20	196	42410	27	13862	5prime_fragment	FALSE	canonical	0	0	junction_3	12.5099960031968	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGGGACATGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	113868304	113766436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_113766957_113770626_113770842_113773199_113773359_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
Isoform_154151_7	chr6	-	722	4	FSM	ENSMUSG00000030315.16	ENSMUST00000152710.8	2198	4	8	1468	8	95	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAGAAAGAAAAAAA	7873	False	NA	NA	False	NA	NA	NA	114852060	114839056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_114839398_114839716_114839841_114840844_114841041_114851999
Isoform_154152_20	chr6	-	1219	6	NIC	ENSMUSG00000030315.16	novel	1023	6	NA	NA	-10	95	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	0.489897948556636	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114946965	114839056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_114839398_114839716_114839841_114840844_114841041_114867577_114867768_114934896_114934973_114946673
Isoform_154154_8	chr6	-	1143	8	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	150.588234356243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTCACTCTGA	NA	False	NA	-40	True	AATAAA	-19	NA	115014822	114981347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_114981481_114987767_114987831_114989118_114989281_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
Isoform_154155_9	chr6	-	985	7	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	168.666007903852	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTTGTCACTCT	NA	False	NA	-42	True	AATAAA	-17	NA	115014812	114981349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_114981481_114987767_114987831_114989118_114989281_115002234_115002386_115009180_115009274_115011911_115012095_115014610
Isoform_154156_491	chr6	-	1140	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	25	3	4	-3	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGTCACTCTGACTG	NA	False	NA	-37	True	AATAAA	-22	NA	115014812	114981344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
Isoform_154157_10	chr6	-	1345	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	7	-184	7	184	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTGGCTATGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	115014830	114981157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
Isoform_154158_29	chr6	-	1191	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	25	-48	4	48	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTGGTAAGGTTTG	NA	False	NA	14	True	NA	NA	NA	115014812	114981293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
Isoform_154159_24	chr6	-	778	7	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-2255	-1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	166.976462080405	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTTGTCACTCT	NA	False	NA	-42	True	AATAAA	-17	NA	115011481	114981349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011453
Isoform_15416_3	chr11	-	3438	5	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40789	-2328	-1001	2328	3prime_fragment	FALSE	canonical	3	20	junction_4	28.5164426252645	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTAAGTTTCTTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	94243013	94231792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905
Isoform_154160_7	chr6	-	1887	5	NIC	ENSMUSG00000030316.14	novel	531	2	NA	NA	-6	819	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	182.283433147393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAAATGTTTCCTTA	NA	False	NA	5	True	ATTAAA	-25	NA	115014822	115007419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_115008724_115009180_115009274_115011116_115011212_115011911_115012095_115014610
Isoform_154162_8	chr6	-	2672	4	NIC	ENSMUSG00000030316.14	novel	531	2	NA	NA	0	1705	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	196.862614248843	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGATGATGATATGTGA	NA	False	NA	NA	False	NA	NA	NA	115014816	115006533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_115008724_115009180_115009274_115011911_115012095_115014610
Isoform_154163_13	chr6	-	2339	4	ISM	ENSMUSG00000030316.14	ENSMUST00000154621.3	724	6	-35	14260	-5	815	5prime_fragment	FALSE	canonical	3	21	junction_2	197.90626288445	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGCAAATGTTTC	NA	False	NA	1	True	ATTAAA	-21	NA	115014821	115007423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_115009274_115011116_115011212_115011911_115012095_115014610
Isoform_15417_15	chr11	-	935	4	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-347	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	32.8937684067971	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	588	False	NA	-4	True	AATAAA	-17	NA	94242359	94234120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242267
Isoform_15418_5	chr11	-	1005	4	NNC	ENSMUSG00000020865.17	novel	4999	31	NA	NA	-420	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	32.8937684067971	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGGGTCACATGTTAC	515	False	NA	-7	True	AATAAA	-14	NA	94242432	94234123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242267
Isoform_154185_1653	chr6	-	2928	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	114	28	114	0	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8258	False	NA	-28	True	AATAAA	-15	NA	115653482	115595557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
Isoform_154186_1625	chr6	-	3025	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	24	21	24	7	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTACTGACTCCTTCAAA	8168	False	NA	-21	True	AATAAA	-22	NA	115653572	115595550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
Isoform_1542_71	chr10	-	2261	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	-320	-1	-320	1	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTGTGCAGGTTTTTT	NA	False	NA	-8	True	AATAAA	-13	NA	5755920	5749158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
Isoform_154208_11	chr6	-	897	7	FSM	ENSMUSG00000059900.15	ENSMUST00000151849.2	927	7	423	-393	81	1	multi-exon	FALSE	canonical	3	40	junction_5	15.4344492037203	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTCGACTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	115711831	115706100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770
Isoform_15421_6	chr11	-	4112	10	NNC	ENSMUSG00000039096.11	novel	4143	9	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.7143352554372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGACCTGCGTAGCT	3249	False	NA	-6	True	AATAAA	-13	NA	94440027	94430630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94432371_94432396_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
Isoform_154211_5	chr6	-	1210	10	NIC	ENSMUSG00000059900.15	novel	843	11	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	20.2319878739914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115739440	115706101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115719270_115719349_115739233
Isoform_154212_6	chr6	-	1149	10	NNC	ENSMUSG00000059900.15	novel	843	11	NA	NA	-978	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_8	21.1029223884592	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTCGACTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	115737210	115706100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115719270_115719349_115737065
Isoform_154218_3633	chr6	-	506	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	4	7	4	0	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	3633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785704	115782472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
Isoform_154219_593	chr6	-	537	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	-27	7	-27	0	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785735	115782472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
Isoform_15422_6	chr11	-	2125	9	FSM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	-8	2026	-8	-2026	multi-exon	FALSE	canonical	3	12	junction_3	10.3319891598859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTATGTATGTCTCATT	3243	False	NA	NA	False	NA	NA	NA	94440033	94432649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
Isoform_154227_13	chr6	-	4051	8	NIC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	1	-8	intron_retention	FALSE	canonical	3	62	junction_7	15.9770243200181	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAAGGTCCCTTTGGC	7888	False	NA	NA	False	AATAAA	-13	NA	115830325	115817665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115829645
Isoform_154230_206	chr6	-	3591	8	FSM	ENSMUSG00000030322.13	ENSMUST00000032469.13	3614	8	14	9	8	-9	multi-exon	FALSE	canonical	0	0	junction_7	37.2010533096435	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAAGGTCCCTTTGG	7895	False	NA	NA	False	AATAAA	-12	NA	115830318	115817666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
Isoform_154236_12	chr6	-	3166	6	FSM	ENSMUSG00000030126.18	ENSMUST00000088896.10	5838	6	114	2558	114	1	multi-exon	FALSE	canonical	2	10	junction_4	4.84148737476408	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGCCGTGTGGATATT	NA	False	NA	NA	False	AATAAA	-16	NA	116170333	115998129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_115999363_116001762_116001899_116019831_116020767_116110727_116111419_116115155_116115212_116170218
Isoform_154239_10	chr6	-	3323	6	FSM	ENSMUSG00000030126.18	ENSMUST00000088896.10	5838	6	-39	2554	-39	5	multi-exon	FALSE	canonical	2	10	junction_4	4.84148737476408	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCGTGTGGATATTTCAG	NA	False	NA	NA	False	AATAAA	-20	NA	116170486	115998125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_115999363_116001762_116001899_116019831_116020767_116110727_116111419_116115155_116115212_116170218
Isoform_15424_8	chr11	-	2124	9	FSM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	-37	2056	19	-2056	multi-exon	FALSE	canonical	3	12	junction_3	10.3319891598859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCACTTGTTGTACAGAA	3214	False	NA	NA	False	NA	NA	NA	94440062	94432679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
Isoform_154240_26	chr6	-	2364	2	FSM	ENSMUSG00000059878.13	ENSMUST00000057540.6	2375	2	-6	17	-6	1	multi-exon	FALSE	canonical	3	18	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACTATCTATTTTACTT	NA	False	NA	-4	True	AATAAA	-19	NA	116605889	116601881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_116604095_116605738
Isoform_154242_185	chr6	-	2260	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	22	905	22	1	multi-exon	FALSE	canonical	3	68	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACTATCTATTTTACTT	NA	False	NA	-4	True	AATAAA	-19	NA	116605938	116601881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_116604095_116605891
Isoform_154244_10	chr6	-	4675	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	155	1630	1	-1630	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGACTCTGTTAAGTG	8761	False	NA	NA	False	NA	NA	NA	116650758	116611598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
Isoform_154245_3	chr6	-	6349	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	111	0	-32	0	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTGTGTTACTGTTT	8717	False	NA	0	True	AATAAA	-18	NA	116650802	116609968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
Isoform_154247_5	chr6	-	551	9	FSM	ENSMUSG00000004988.10	ENSMUST00000204214.3	550	9	0	-1	0	0	multi-exon	FALSE	canonical	1	3	junction_3	4.92442890089805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTCTTGTGACCC	2519	False	NA	NA	False	ATTAAA	-17	NA	117914296	117910519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_117910710_117910804_117910843_117911275_117911313_117911386_117911462_117911969_117911994_117912115_117912149_117912814_117912881_117913698_117913742_117914251
Isoform_154248_4	chr6	-	553	9	ISM	ENSMUSG00000004988.10	ENSMUST00000203082.3	815	10	358	0	1	0	3prime_fragment	FALSE	canonical	1	3	junction_3	4.29389100932942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTCTTGTGACCC	2520	False	NA	NA	False	ATTAAA	-17	NA	117914295	117910519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_117910710_117910804_117910843_117911275_117911313_117911386_117911462_117911969_117911994_117912115_117912149_117912814_117912884_117913698_117913742_117914251
Isoform_154249_87	chr6	-	3630	8	FSM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	29	2	29	-2	multi-exon	FALSE	canonical	3	37	junction_1	9.61291648072041	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGTGGTAAGTTC	NA	False	NA	NA	False	AATAAA	-22	NA	118116072	118084414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
Isoform_15425_101	chr11	-	3085	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	68	1	-34	-1	multi-exon	FALSE	canonical	3	47	junction_6	8.37615663654877	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGATTGGACTGTAACT	7353	False	NA	-5	True	AATAAA	-18	NA	94492629	94447928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
Isoform_154251_7	chr6	-	3724	8	FSM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	-62	-1	-62	1	multi-exon	FALSE	canonical	3	37	junction_1	9.61291648072041	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTGGTAAGTTCATT	NA	False	NA	NA	False	AATAAA	-25	NA	118116163	118084411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
Isoform_154252_3	chr6	-	4131	8	NNC	ENSMUSG00000042042.15	novel	3661	8	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	19.8195945097424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGTGGTAAGTTC	NA	False	NA	NA	False	AATAAA	-22	NA	118116063	118084414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115473
Isoform_15426_36	chr11	-	3139	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	14	1	14	-1	multi-exon	FALSE	canonical	3	47	junction_6	8.37615663654877	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGATTGGACTGTAACT	7299	False	NA	-5	True	AATAAA	-18	NA	94492683	94447928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
Isoform_154278_894	chr6	-	4304	23	FSM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	40	1	-22	-1	multi-exon	FALSE	canonical	2	285	junction_22	59.9717047606688	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGCCTAGTGATTTAT	8325	False	NA	-2	True	ATTAAA	-15	NA	118396395	118360342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
Isoform_15428_8	chr11	-	3280	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	-123	-3	-123	3	multi-exon	FALSE	canonical	3	47	junction_6	8.37615663654877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGACTGTAACTCACA	7162	False	NA	-1	True	AATAAA	-22	NA	94492820	94447924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
Isoform_154282_19	chr6	-	4381	22	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-22	-2	intron_retention	FALSE	canonical	2	285	junction_21	61.0015426740733	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8325	False	NA	-3	True	ATTAAA	-14	NA	118396395	118360343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
Isoform_154285_14	chr6	-	3649	6	FSM	ENSMUSG00000030145.15	ENSMUST00000069292.14	3683	6	33	1	3	-1	multi-exon	FALSE	canonical	3	13	junction_5	4.48998886412873	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTGTTTCTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	118432456	118404280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430849_118431637_118431873_118432376
Isoform_154290_21	chr6	-	6971	34	FSM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	-42	1	-42	-1	multi-exon	FALSE	canonical	3	23	junction_21	12.4668891127898	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAATCCTATATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	118539229	118478269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
Isoform_154291_4	chr6	-	6800	33	NIC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-45	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_31	15.2063925702318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAATCCTATATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	118539232	118478269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118536231_118536347_118538773
Isoform_154292_13	chr6	-	6975	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	12.9133582362079	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAATCCTATATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	118539218	118478269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
Isoform_154293_5	chr6	-	7431	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-53	0	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_21	14.0305321010163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	118539240	118478268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
Isoform_154299_151	chr6	-	4146	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	-48	-609	-48	-6	multi-exon	FALSE	canonical	3	86	junction_7	15.2168005969771	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTTTTGTTGTGTTT	NA	False	NA	-6	True	AATAAA	-15	NA	119365695	119330116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
Isoform_1543_25	chr10	-	2306	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	-365	-1	-365	1	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTGTGCAGGTTTTTT	NA	False	NA	-8	True	AATAAA	-13	NA	5755965	5749158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
Isoform_154300_10	chr6	-	4198	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	-100	-609	-100	-6	multi-exon	FALSE	canonical	3	86	junction_7	15.2168005969771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTTTTGTTGTGTTT	NA	False	NA	-6	True	AATAAA	-15	NA	119365747	119330116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
Isoform_154306_45	chr6	-	3988	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	190	6	-39	-6	multi-exon	FALSE	canonical	3	26	junction_7	32.1685611510775	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTTTTGTTGTGTTT	7515	False	NA	-6	True	AATAAA	-15	NA	119394475	119330116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
Isoform_154310_8	chr6	-	3952	7	NIC	ENSMUSG00000030168.14	novel	3489	8	NA	NA	-42	-6	combination_of_known_splicesites	TRUE	canonical	2	3	junction_2	42.0977698010503	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTTTTGTTGTGTTT	NA	False	NA	-6	True	AATAAA	-15	NA	119365689	119330116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_119332890_119334176_119334371_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
Isoform_154312_41	chr6	-	2178	5	FSM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	-6	2	-6	0	multi-exon	FALSE	canonical	3	7	junction_4	2.73861278752583	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTCCCTCTCCTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	119426353	119409493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119426177
Isoform_154313_7	chr6	-	2350	5	FSM	ENSMUSG00000030170.15	ENSMUST00000119369.2	2339	5	-10	-1	-10	0	multi-exon	FALSE	canonical	0	0	junction_4	5.21416340365355	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTCCCTCTCCTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	119521289	119409493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119520941
Isoform_154314_3	chr6	-	2082	5	NNC	ENSMUSG00000030170.15	novel	2115	5	NA	NA	-852	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.21416340365355	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTCCCTCTCCTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	119427199	119409493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119427119
Isoform_154315_3	chr6	-	4989	3	NNC	ENSMUSG00000030172.16	novel	1836	9	NA	NA	27268	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	49.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACTGTGTGCTGCAGC	NA	False	NA	NA	False	TATAAA	-7	NA	119571798	119547765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_119550091_119550112_119552724_119571745
Isoform_15432_240	chr11	-	2204	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	240	0	-53	0	multi-exon	FALSE	canonical	3	178	junction_8	32.4422563950167	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4643	False	NA	-5	True	AATAAA	-18	NA	94544550	94535821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
Isoform_154322_22	chr6	-	8580	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	1	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	29.3221669336393	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTGCAGCCTTCTT	NA	False	NA	NA	False	TATAAA	-13	NA	119825110	119547759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_119550061_119550085_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
Isoform_154330_101	chr6	-	2763	7	ISM	ENSMUSG00000045962.17	ENSMUST00000159397.8	5745	10	-52	15805	-4	99	5prime_fragment	FALSE	canonical	2	6	junction_4	3.590109871423	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAGAAAACAAGAAG	7171	False	NA	NA	False	NA	NA	NA	120015620	119946415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834
Isoform_154339_25	chr6	-	5128	20	FSM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	-382	-1788	-382	1051	multi-exon	FALSE	canonical	3	34	junction_7	11.0924096230953	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCGGCTGTTTCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	120271902	120178982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
Isoform_15434_93	chr11	-	2450	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	-6	0	-6	0	multi-exon	FALSE	canonical	3	178	junction_8	32.4422563950167	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4397	False	NA	-5	True	AATAAA	-18	NA	94544796	94535821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
Isoform_154340_11	chr6	-	6396	20	FSM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	-382	-3056	-382	2319	multi-exon	FALSE	canonical	3	34	junction_7	11.0924096230953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGTGTTTCATGTACA	NA	False	NA	-3	True	NA	NA	NA	120271902	120177714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
Isoform_154344_33	chr6	-	5127	20	FSM	ENSMUSG00000041372.11	ENSMUST00000057283.8	3677	20	-378	-1072	-378	1051	multi-exon	FALSE	canonical	3	28	junction_7	11.9409906464132	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCGGCTGTTTCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	120271898	120178982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
Isoform_154346_10	chr6	-	6403	20	FSM	ENSMUSG00000041372.11	ENSMUST00000057283.8	3677	20	-391	-2335	-391	2314	multi-exon	FALSE	canonical	3	28	junction_7	11.9409906464132	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTAATGTGTTTCAT	NA	False	NA	-8	True	NA	NA	NA	120271911	120177719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
Isoform_154348_3	chr6	-	3917	19	ISM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	-401	2002	-401	-2002	5prime_fragment	FALSE	canonical	3	34	junction_6	11.3747880186461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGGGGTAGGGTGTGT	NA	False	NA	NA	False	ATTAAA	-38	NA	120271921	120182772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
Isoform_154353_28	chr6	-	2423	12	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	3285	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.6071095082863	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120331016	120301283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961
Isoform_154355_188	chr6	-	2498	12	FSM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	96	-707	1	-5	multi-exon	FALSE	canonical	3	197	junction_10	38.004349468349	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTCAGGGCTCTACA	NA	False	NA	-19	True	AATAAA	-13	NA	120334337	120301288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
Isoform_154358_7	chr6	-	2544	13	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.8387884757201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120334409	120301283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
Isoform_154361_7	chr6	-	2709	13	NNC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.503694514042	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	-12	True	AATAAA	-20	NA	120341319	120301281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120341034
Isoform_154366_83	chr6	-	2518	13	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	1	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	86.4659133223415	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	-12	True	AATAAA	-20	NA	120334327	120301281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
Isoform_154369_10	chr6	-	2749	12	NIC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	35	-6	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	85.7515149373443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120341282	120301289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120341034
Isoform_15437_10	chr11	-	2494	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	78.9567782999419	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGGAGCTTGGAGGAA	4407	False	NA	-8	True	AATAAA	-15	NA	94544786	94535824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
Isoform_154371_8	chr6	-	2839	13	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.980520679897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGGCTCTACAAAGTCT	NA	False	NA	-13	True	AATAAA	-19	NA	120334307	120301282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120333945
Isoform_154373_6	chr6	-	2499	12	NIC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	82.5612720127521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTCAGGGCTCTACA	NA	False	NA	-19	True	AATAAA	-13	NA	120334330	120301288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319039_120325348_120325492_120327167_120327352_120330961_120331016_120334287
Isoform_154378_450	chr6	-	1926	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	0	2	0	-2	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTGTCTTGTGAGGA	NA	False	NA	33	True	ATTAAA	-19	NA	120508280	120486456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
Isoform_154379_23	chr6	-	1959	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	-31	0	-31	0	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	35	True	ATTAAA	-21	NA	120508311	120486454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
Isoform_15438_73	chr11	-	2281	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-72	1	at_least_one_novel_splicesite	TRUE	canonical	3	39	junction_7	78.9567782999419	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGCTTGGAGGAAGACT	4624	False	NA	-4	True	AATAAA	-19	NA	94544569	94535820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
Isoform_154381_12	chr6	-	2092	7	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	207	junction_2	17.2086864370552	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTGTCTTGTGAGGA	NA	False	NA	33	True	ATTAAA	-19	NA	120508278	120486456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
Isoform_154383_319	chr6	-	1255	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	55	2	-46	-2	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGTTGTTGTTCCTTA	NA	False	NA	-5	True	ATTAAA	-17	NA	120799699	120772206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
Isoform_154385_590	chr6	-	1214	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	96	2	-5	-2	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGTTGTTGTTCCTTA	NA	False	NA	-5	True	ATTAAA	-17	NA	120799658	120772206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
Isoform_154396_28	chr6	-	2042	7	NIC	ENSMUSG00000004446.13	novel	2415	7	NA	NA	0	-265	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	439.124507780348	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893797	120870079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120893694
Isoform_154398_1268	chr6	-	1907	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	17	265	0	-265	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893797	120870079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
Isoform_154403_155	chr6	-	1831	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	0	-265	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	358.381137896514	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893814	120870079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893787
Isoform_154405_28	chr6	-	1885	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	8904	-265	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	380.930964874214	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120884855	120870079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120884774
Isoform_154410_3	chr6	-	3311	3	ISM	ENSMUSG00000051586.18	ENSMUST00000151602.4	992	8	23358	-3061	258	2	3prime_fragment	FALSE	canonical	3	24	junction_1	1	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATGAAAAATGTATTT	4602	False	NA	NA	False	AATAAA	-29	NA	120912238	120908680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_120911814_120911893_120911968_120912134
Isoform_154412_3	chr6	-	3573	6	ISM	ENSMUSG00000051586.18	ENSMUST00000151602.4	992	8	4949	-3069	4037	-5	3prime_fragment	FALSE	canonical	3	23	junction_5	2.28035085019828	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTATTTCTGAAGTC	3160	False	NA	NA	False	AATAAA	-37	NA	120930647	120908672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594
Isoform_154415_8	chr6	-	3513	21	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-65	-14811	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	16.1133485036475	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCACTTTACATCCTGCT	NA	False	NA	NA	False	NA	NA	NA	121087119	120950114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
Isoform_154417_6	chr6	-	7123	19	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-69	4	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	14.3922132581871	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTGAGTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	121087123	120974272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
Isoform_154419_5	chr6	-	2924	19	NIC	ENSMUSG00000051586.18	novel	2953	19	NA	NA	-71	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	23.4668797338812	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTATTTGTCCTTTAG	NA	False	NA	-7	True	AATAAA	-17	NA	121087125	120984202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_120984391_120985955_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
Isoform_154420_136	chr6	-	2843	18	NIC	ENSMUSG00000051586.18	novel	2875	18	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	13.1507101127881	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATTTGTCCTTTAGTG	NA	False	NA	-5	True	AATAAA	-19	NA	121087126	120984200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
Isoform_154466_310	chr6	-	4033	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	-146	6	-96	-6	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGCCTCCATTGTCTT	8930	False	NA	-25	True	ATTAAA	-28	NA	122316763	122294702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_154468_430	chr6	-	3328	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	8	557	-5	8	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTAATCCAGTTTTTAA	9084	False	NA	-3	True	AATAAA	-22	NA	122316609	122295253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_15447_429	chr11	-	3342	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	99	1	-3	-1	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGTCCTTGTTTGC	2304	False	NA	-7	True	AATATA	-15	NA	94568242	94554677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
Isoform_154470_61	chr6	-	3518	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	-187	562	-137	3	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	8889	False	NA	-8	True	AATAAA	-17	NA	122316804	122295258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_154477_61	chr6	-	3388	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_14	273.877300100253	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	9116	False	NA	-7	True	AATAAA	-18	NA	122316577	122295257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
Isoform_154478_54	chr6	-	3950	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_14	273.877300100253	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTGTCTTACTGCATT	9117	False	NA	-17	True	ATTAAA	-36	NA	122316576	122294694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
Isoform_15448_170	chr11	-	3392	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	49	1	49	-1	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGTCCTTGTTTGC	2254	False	NA	-7	True	AATATA	-15	NA	94568292	94554677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
Isoform_15449_10	chr11	-	4849	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	104	-1511	2	1511	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCGCTTTGTTTTAATT	2309	False	NA	NA	False	NA	NA	NA	94568237	94553165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
Isoform_154498_155	chr6	-	3730	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-5	-113	-5	1	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCATTGTCTTACTGCAT	9084	False	NA	-18	True	ATTAAA	-35	NA	122316609	122294695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_154499_195	chr6	-	3168	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-5	449	-5	4	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	9084	False	NA	-7	True	AATAAA	-18	NA	122316609	122295257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_154500_100	chr6	-	3884	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-159	-113	-96	1	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCATTGTCTTACTGCAT	8930	False	NA	-18	True	ATTAAA	-35	NA	122316763	122294695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_154501_153	chr6	-	3330	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-167	449	-104	4	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	8922	False	NA	-7	True	AATAAA	-18	NA	122316771	122295257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_154502_34	chr6	-	3976	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-264	-100	-201	0	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	8825	False	NA	-31	True	ATTAAA	-22	NA	122316868	122294708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_154505_47	chr6	-	3375	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-212	449	-149	4	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	8877	False	NA	-7	True	AATAAA	-18	NA	122316816	122295257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_15453_9	chr11	-	3986	10	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	23	0	intron_retention	FALSE	canonical	3	112	junction_6	13.3499895963339	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2228	False	NA	-6	True	AATATA	-16	NA	94568318	94554676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
Isoform_154530_22	chr6	-	2259	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	-22	2488	-22	-1329	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGCATGTTTGCATGA	9218	False	NA	-127	True	AATAAA	-15	NA	122463486	122432547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
Isoform_154535_25	chr6	-	2023	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	214	2488	148	-1329	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGCATGTTTGCATGA	9454	False	NA	-127	True	AATAAA	-15	NA	122463250	122432547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
Isoform_154536_5	chr6	-	2061	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	376	2288	310	-1129	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTATGACTGCATCTTT	9616	False	NA	-2	True	AATACA	-16	NA	122463088	122432347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
Isoform_154537_4	chr6	-	2155	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	201	2369	135	-1210	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTAGTGTTTTAGTC	9441	False	NA	-8	True	GATAAA	-34	NA	122463263	122432428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
Isoform_154539_4	chr6	-	2235	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	202	2288	136	-1129	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTATGACTGCATCTTT	9442	False	NA	-2	True	AATACA	-16	NA	122463262	122432347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
Isoform_15454_21	chr11	-	3957	10	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	49	-3	intron_retention	FALSE	canonical	3	112	junction_6	13.3499895963339	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCAATGTCCTTGTTT	2254	False	NA	-9	True	AATATA	-13	NA	94568292	94554679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
Isoform_154542_11	chr6	-	2169	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112585.8	2127	8	-38	-4	-22	2	multi-exon	FALSE	canonical	3	36	junction_1	6.10453160549186	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTGTGTTTGTGGTG	8686	False	NA	NA	False	AGTAAA	-16	NA	122579368	122554755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215
Isoform_154545_72	chr6	-	2031	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	98	-4	98	4	multi-exon	FALSE	canonical	3	704	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTGTTAAGGTGTTTG	9945	False	NA	NA	False	NA	NA	NA	122586948	122582357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122584095_122586654
Isoform_154546_869	chr6	-	1230	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	59	836	59	-836	multi-exon	FALSE	canonical	3	704	junction_1	0	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCTCTCTTGAATCGGA	9906	False	NA	-19	True	AATAAA	-21	NA	122586987	122583197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122584095_122586654
Isoform_154547_83	chr6	-	1665	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	99	361	99	-361	multi-exon	FALSE	canonical	3	704	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTTCACTTGTTTGT	9946	False	NA	-8	True	AATATA	-26	NA	122586947	122582722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122584095_122586654
Isoform_154548_89	chr6	-	1336	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	-56	845	-56	-845	multi-exon	FALSE	canonical	3	704	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTATGCTCTCT	9924	False	NA	-28	True	AATAAA	-12	NA	122587102	122583206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122584095_122586654
Isoform_15455_62	chr11	-	2277	11	FSM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	-31	0	-31	0	multi-exon	FALSE	canonical	3	33	junction_1	6.12290780593665	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGGCTTCCTTGC	6043	False	NA	-1	True	NA	NA	NA	94932211	94917083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
Isoform_154554_15	chr6	-	1426	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	-145	844	-145	-844	multi-exon	FALSE	canonical	3	704	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTATGCTCTCTT	9835	False	NA	-27	True	AATAAA	-13	NA	122587191	122583205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122584095_122586654
Isoform_15456_6	chr11	-	2012	10	NNC	ENSMUSG00000038967.14	novel	2246	11	NA	NA	-3565	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	12.0369800568452	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGGCTTCCTTGC	NA	False	NA	-1	True	NA	NA	NA	94923815	94917083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94923691
Isoform_15457_3	chr11	-	945	4	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	-39	5287	-39	369	5prime_fragment	FALSE	canonical	3	38	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAATTCTGTTGTTGTA	6035	False	NA	NA	False	AGTAAA	-20	NA	94932219	94922370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_94922847_94923290_94923363_94930174_94930317_94931964
Isoform_154583_27717	chr6	-	3717	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	227	15	4	2	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	27717	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
Isoform_15461_32	chr11	-	4955	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	-97	3	-10	-3	multi-exon	FALSE	canonical	3	46	junction_7	7.12179752590594	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGTGTCTGCTCCTA	8775	False	NA	-3	True	AATAAA	-19	NA	94967637	94935302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
Isoform_154635_148	chr6	-	3145	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	-14	8	-14	-8	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAAACTGGACTGACGT	NA	False	NA	-24	True	AATAAA	-21	NA	124392010	124373798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
Isoform_154636_17	chr6	-	3234	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	-98	3	-68	-3	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACTGACGTGGGTA	NA	False	NA	-19	True	AATAAA	-26	NA	124392094	124373793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
Isoform_15464_3	chr11	-	4847	27	NIC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	14.1509194298483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	8775	False	NA	-2	True	AATAAA	-20	NA	94967637	94935301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956_94967485_94967593
Isoform_154640_9	chr6	-	3074	15	FSM	ENSMUSG00000005069.13	ENSMUST00000112531.8	3075	15	1	0	1	0	multi-exon	FALSE	canonical	2	3	junction_14	32.7566787083184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCCGCTGCTGACGTT	NA	False	NA	-1	True	AATAAA	-44	NA	124391821	124373775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391725
Isoform_154641_374	chr6	-	3041	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	14	18	14	-3	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACTGACGTGGGTA	NA	False	NA	-19	True	AATAAA	-26	NA	124392012	124373793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
Isoform_154642_38	chr6	-	3164	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	-89	-2	-89	1	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCCGCTGCTGACGTTGG	NA	False	NA	1	True	AATAAA	-18	NA	124392115	124373773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
Isoform_154646_4	chr6	-	2562	7	ISM	ENSMUSG00000008153.13	ENSMUST00000112523.8	3703	18	12544	6	-28	-6	intron_retention	FALSE	canonical	3	25	junction_5	9.58152156786987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTCTTGCTTGCTG	9225	False	NA	NA	False	AATAAA	-9	NA	124427159	124407723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448
Isoform_154649_41	chr6	-	2418	8	ISM	ENSMUSG00000008153.13	ENSMUST00000112523.8	3703	18	12554	5	-18	-5	3prime_fragment	FALSE	canonical	3	22	junction_7	10.5211157940126	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTCTTGCTTGCTGT	9235	False	NA	NA	False	AATAAA	-10	NA	124427149	124407722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732
Isoform_15465_6	chr11	-	4320	26	NIC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_25	13.9057398221022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTGCTCCTACC	8775	False	NA	-1	True	AATAAA	-21	NA	94967637	94935300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94967593
Isoform_154651_32	chr6	-	3948	18	FSM	ENSMUSG00000008153.13	ENSMUST00000008297.5	4014	18	61	5	61	-5	multi-exon	FALSE	canonical	2	7	junction_17	12.5334155436701	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTCTTGCTTGCTGT	8501	False	NA	NA	False	AATAAA	-10	NA	124441692	124407722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732_124426891_124427664_124427719_124428264_124428428_124433835_124433949_124434814_124435097_124435502_124435689_124436116_124436267_124436724_124436934_124438490_124438687_124439068_124439192_124441379
Isoform_154652_12	chr6	-	2875	12	FSM	ENSMUSG00000038521.18	ENSMUST00000162443.8	2906	12	29	2	-9	-2	multi-exon	FALSE	canonical	1	3	junction_4	4.09797369803078	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGCTGGTCTGCTTTTT	NA	False	NA	NA	False	AGTAAA	-12	NA	124519289	124507308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319_124514446_124517279_124517458_124517747_124517956_124518291_124518448_124519226
Isoform_154655_864	chr6	-	1010	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	24	0	-13	0	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	False	NA	-14	True	TATAAA	-19	NA	124689117	124681343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
Isoform_154657_53	chr6	-	1039	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	-6	1	-6	0	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	False	NA	-15	True	TATAAA	-18	NA	124689147	124681344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
Isoform_154662_46	chr6	-	1308	5	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	1245	junction_4	117.50957407803	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	False	NA	-15	True	TATAAA	-18	NA	124689118	124681344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124681622_124681901_124682052_124682120_124682620_124682703_124682806_124688838
Isoform_154665_19	chr6	-	1080	5	FSM	ENSMUSG00000004268.12	ENSMUST00000142187.8	917	5	-86	-77	-14	0	multi-exon	FALSE	canonical	3	1245	junction_4	110.261904119238	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	False	NA	-14	True	TATAAA	-19	NA	124689118	124681343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124681622_124681901_124682180_124682477_124682620_124682703_124682806_124688838
Isoform_154673_320	chr6	-	2168	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	41	10	-3	3	multi-exon	FALSE	canonical	3	99	junction_10	22.1017847444248	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8771	False	NA	-10	True	AATAAA	-18	NA	124710076	124697679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
Isoform_154677_30	chr6	-	2205	16	FSM	ENSMUSG00000004266.16	ENSMUST00000171549.9	2226	16	11	10	11	3	multi-exon	FALSE	canonical	3	18	junction_15	37.1732281203676	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8931	False	NA	-10	True	AATAAA	-18	NA	124715666	124697679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
Isoform_154678_16	chr6	-	2312	16	FSM	ENSMUSG00000004266.16	ENSMUST00000171549.9	2226	16	-96	10	-96	3	multi-exon	FALSE	canonical	3	18	junction_15	37.1732281203676	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8824	False	NA	-10	True	AATAAA	-18	NA	124715773	124697679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
Isoform_154679_28	chr6	-	2338	15	NIC	ENSMUSG00000004266.16	novel	2219	16	NA	NA	-2	3	intron_retention	FALSE	canonical	3	99	junction_9	22.8728740508695	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8772	False	NA	-10	True	AATAAA	-18	NA	124710075	124697679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
Isoform_154681_432	chr6	-	532	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	327	4	18	0	multi-exon	FALSE	canonical	3	807	junction_1	71.5	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTTGTGTCAGTCAT	9270	False	NA	NA	False	AATAAA	-13	NA	124718010	124716149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124716377_124717481_124717659_124717882
Isoform_154682_11	chr6	-	773	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	88	2	88	1	multi-exon	FALSE	canonical	3	807	junction_1	71.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGTGTCAGTCATTT	9031	False	NA	NA	False	AATAAA	-15	NA	124718249	124716147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124716377_124717481_124717659_124717882
Isoform_154683_19	chr6	-	609	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	251	3	-58	0	multi-exon	FALSE	canonical	3	807	junction_1	71.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGTGTCAGTCATT	9194	False	NA	NA	False	AATAAA	-14	NA	124718086	124716148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124716377_124717481_124717659_124717882
Isoform_154685_3	chr6	-	1682	4	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	11007	3	108	-3	3prime_fragment	FALSE	canonical	3	86	junction_2	5.73488351136175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGTCTGTGACGTGTT	9929	False	NA	-3	True	AAAACA	-18	NA	124722480	124719509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682
Isoform_154686_5	chr6	-	1667	5	NIC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	39.1431667088906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	9834	False	NA	0	True	AAAACA	-21	NA	124722575	124719506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722492
Isoform_154691_5	chr6	-	4236	10	NIC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	26.1708536400117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	9724	False	NA	0	True	AAAACA	-21	NA	124732978	124719506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124732946
Isoform_154693_15	chr6	-	4662	10	FSM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	-229	0	-229	0	multi-exon	FALSE	canonical	3	30	junction_9	22.6083126851416	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	8986	False	NA	0	True	AAAACA	-21	NA	124733716	124719506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124733258
Isoform_154695_3	chr6	-	4763	10	FSM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	-330	0	-330	0	multi-exon	FALSE	canonical	3	30	junction_9	22.6083126851416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	8885	False	NA	0	True	AAAACA	-21	NA	124733817	124719506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124733258
Isoform_154696_5	chr6	-	4300	10	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	30.2720178007412	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	9657	False	NA	0	True	AAAACA	-21	NA	124733045	124719506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724950_124726198_124726313_124726424_124726563_124726709_124726885_124732946
Isoform_154697_11	chr6	-	4421	10	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	27.442869950337	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTCTGTGACGTGTTTT	9223	False	NA	-1	True	AAAACA	-20	NA	124733479	124719507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724950_124726198_124726313_124726424_124726563_124726709_124726885_124733258
Isoform_154698_3	chr6	-	4660	10	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	-230	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	27.442869950337	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	8985	False	NA	0	True	AAAACA	-21	NA	124733717	124719506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724950_124726198_124726313_124726424_124726563_124726709_124726885_124733258
Isoform_154702_66	chr6	-	2349	13	NNC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	non_canonical	3	32	junction_12	9.04118662320138	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGTCTGAGGACTCTT	9986	False	NA	-2	True	ATTAAA	-21	NA	124746516	124737323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_124737707_124737726_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
Isoform_154703_3	chr6	-	2423	13	NNC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	32	junction_12	9.04118662320138	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCTTGTCTGAGGACT	9909	False	NA	-5	True	ATTAAA	-18	NA	124746593	124737326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_124737707_124737726_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
Isoform_154704_14	chr6	-	2655	13	NNC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	32	junction_12	9.04118662320138	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGGCTGAACTAAGGAT	9986	False	NA	-3	True	NA	NA	NA	124746516	124737017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_124737707_124737726_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
Isoform_154705_4	chr6	-	2887	11	NIC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	-4	1	intron_retention	FALSE	canonical	3	32	junction_10	8.97830719011106	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCTTGTCTGAGGACT	9985	False	NA	-5	True	ATTAAA	-18	NA	124746517	124737326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
Isoform_154706_4	chr6	-	2532	11	NNC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	-24	-2	intron_retention	FALSE	non_canonical	3	34	junction_1	8.87975224879613	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCACCCCTTGTCTGAGG	8652	False	NA	-8	True	ATTAAA	-15	NA	124745363	124737329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_124737707_124737726_124738326_124738610_124738670_124739615_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200
Isoform_154707_5	chr6	-	2589	12	NNC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	-4	0	intron_retention	FALSE	non_canonical	3	32	junction_11	9.43704674353526	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	9985	False	NA	-6	True	ATTAAA	-17	NA	124746517	124737327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_124737707_124737726_124738326_124738610_124738670_124739615_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
Isoform_154717_2452	chr6	-	1339	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	139	123	1	-123	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	2452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	-7	True	AATAAA	-14	NA	124791120	124787677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
Isoform_154718_54	chr6	-	1460	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	143	-2	1	2	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTCTTTGTCCCAGGC	NA	False	NA	-21	True	AATACA	-18	NA	124791116	124787552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
Isoform_154719_41	chr6	-	1391	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	87	123	-51	-123	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	-7	True	AATAAA	-14	NA	124791172	124787677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
Isoform_154727_75	chr6	-	3152	20	FSM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	45	16	-4	3	multi-exon	FALSE	canonical	3	25	junction_5	195.368477767687	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACGGGGGCTGACTGG	7901	False	NA	-24	True	AATACA	-12	NA	124806402	124791997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
Isoform_154742_94	chr6	-	3029	20	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	192.331489002841	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACGGGGGCTGACTGG	7901	False	NA	-24	True	AATACA	-12	NA	124806402	124791997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803261_124803388_124806247
Isoform_154750_2452	chr6	-	3101	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	-6	-19	-6	0	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	2452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7899	False	NA	-8	True	AATAAA	-15	NA	124806404	124791981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
Isoform_154751_495	chr6	-	3117	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	-38	-3	11	3	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACGGGGGCTGACTGG	7867	False	NA	-24	True	AATACA	-12	NA	124806436	124791997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
Isoform_154765_9	chr6	-	2815	15	FSM	ENSMUSG00000023191.10	ENSMUST00000023958.10	2850	15	34	1	11	-1	multi-exon	FALSE	canonical	1	4	junction_14	4.42396073348629	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGGTCTGCTCTATCC	5517	False	NA	NA	False	AATAAA	-26	NA	124834681	124818052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124818803_124819034_124819176_124821978_124822055_124822164_124822283_124822470_124822622_124822904_124823007_124827588_124827714_124827880_124827949_124828041_124828095_124830013_124830104_124831273_124831411_124831810_124831943_124832043_124832240_124832906_124833060_124834158
Isoform_154766_7	chr6	-	2689	5	FSM	ENSMUSG00000038390.12	ENSMUST00000046893.10	2676	5	-14	1	-14	-1	multi-exon	FALSE	canonical	1	2	junction_4	3.56195171219375	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGATGTTCAGCGTTTG	NA	False	NA	-1	True	ATTAAA	-20	NA	124840894	124835407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124836184_124836454_124836613_124836985_124837176_124837781_124839086_124840633
Isoform_154771_763	chr6	-	1148	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	0	1	0	-1	multi-exon	FALSE	canonical	3	521	junction_3	90.7837402842601	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTCTCCTGCTTTCCCG	NA	False	NA	-7	True	AATAAA	-25	NA	124894909	124890644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
Isoform_154772_50	chr6	-	1200	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	-52	1	-52	-1	multi-exon	FALSE	canonical	3	521	junction_3	90.7837402842601	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTCTCCTGCTTTCCCG	NA	False	NA	-7	True	AATAAA	-25	NA	124894961	124890644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
Isoform_154785_48	chr6	-	1203	8	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	28	-32	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	695.556714335461	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTTTTGTCCAAATTAAA	NA	False	NA	-4	True	CATAAA	-24	NA	124942225	124935407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
Isoform_154788_72	chr6	-	1301	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	28	-1	2	1	multi-exon	FALSE	canonical	3	371	junction_1	503.213915644191	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTATGCCAGGAGATT	NA	False	NA	-15	True	ATTAAA	-14	NA	124942473	124935374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_154789_373	chr6	-	1260	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	28	40	2	-40	multi-exon	FALSE	canonical	3	371	junction_1	503.213915644191	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTCCCTTTTGTCC	NA	False	NA	-12	True	CATAAA	-16	NA	124942473	124935415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_154800_200	chr6	-	1696	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	25	-4	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	583.751379843669	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942228	124935782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
Isoform_154809_1330	chr6	-	1760	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942475	124935782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_154810_132	chr6	-	2148	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	2	-17	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGAGTTTCCAAGAAG	NA	False	NA	11	True	CATAAA	-39	NA	124942473	124935392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_154816_44	chr6	-	1744	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-39	-4	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_7	623.446346479611	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942209	124935782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942114
Isoform_154818_31	chr6	-	1554	7	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	3	57	junction_6	644.566951957324	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942474	124935782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124942364
Isoform_154828_265	chr6	-	1918	7	ISM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	29	407	3	-4	5prime_fragment	FALSE	canonical	3	1332	junction_6	190.502333027417	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942472	124935782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_154829_33	chr6	-	2327	7	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	2	1	intron_retention	FALSE	canonical	3	1332	junction_6	190.502333027417	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTATGCCAGGAGATT	NA	False	NA	-15	True	ATTAAA	-14	NA	124942473	124935374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_154835_17	chr6	-	1249	6	NIC	ENSMUSG00000057666.19	novel	1273	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	832	junction_5	4068.19726168729	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125141906	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125141815
Isoform_154836_8	chr6	-	1428	7	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	204	junction_5	3916.70276933715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142059_125142275_125142514
Isoform_154837_22	chr6	-	1369	7	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	2	245	junction_5	3903.40606251629	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142567	125138814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142117_125142275_125142514
Isoform_154838_13	chr6	-	1266	6	ISM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	395	-1	198	0	3prime_fragment	FALSE	canonical	3	6089	junction_1	2018.75426934533	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142341	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233
Isoform_154839_5	chr6	-	1486	6	ISM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	175	-1	5	0	intron_retention	FALSE	canonical	3	6089	junction_1	2018.75426934533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142561	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233
Isoform_15484_1439	chr11	-	3517	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	43	0	-2	0	multi-exon	FALSE	canonical	3	566	junction_10	130.748239149965	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201029	95165084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
Isoform_154840_124	chr6	-	1398	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	23	-1	23	0	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142713	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_154841_4	chr6	-	1325	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	168	-73	0	-66	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCATGTATCTTTAT	NA	False	NA	57	True	NA	NA	NA	125142568	125138743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_154843_4	chr6	-	2178	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	-757	-1	-63	0	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125143493	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_154844_4	chr6	-	1274	7	NNC	ENSMUSG00000057666.19	novel	1273	7	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_6	4003.91573615407	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125143450	125138814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125143376
Isoform_154845_9	chr6	-	3087	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6089	junction_1	2110.23520963896	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142568	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125142275_125142514
Isoform_154846_5	chr6	-	1387	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6089	junction_1	1692.66445582106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142568	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125139357_125139440_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_154847_18	chr6	-	1337	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6089	junction_1	1950.20942465162	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142568	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_154848_5	chr6	-	3171	5	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6089	junction_1	2149.62629019558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142568	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125139672_125139805_125140004_125140101_125142275_125142514
Isoform_154849_5	chr6	-	1472	5	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	6089	junction_1	1441.13000367767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_154850_4	chr6	-	1568	4	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6089	junction_1	1492.21602546906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142567	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125140400_125142233_125142275_125142514
Isoform_154851_5	chr6	-	3402	3	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6089	junction_1	1017.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142567	125138815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125139065_125139174_125142275_125142514
Isoform_154852_4	chr6	-	3512	2	FSM	ENSMUSG00000057666.19	ENSMUST00000144588.2	769	2	2	-2745	0	1	multi-exon	FALSE	canonical	3	8124	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142566	125138814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125142275_125142514
Isoform_154896_82	chr6	-	4536	32	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-15	-1	combination_of_known_junctions	TRUE	canonical	3	50	junction_31	121.390529984967	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTGTCCTGGCTGGT	3591	False	NA	-10	True	AATAAA	-19	NA	125168468	125144970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168356
Isoform_154898_684	chr6	-	4485	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	143	1	45	-1	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTGTCCTGGCTGGT	3538	False	NA	-10	True	AATAAA	-19	NA	125168521	125144970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_154899_412	chr6	-	4561	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	66	2	-32	-2	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3461	False	NA	-11	True	AATAAA	-18	NA	125168598	125144971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_154900_48	chr6	-	4631	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	-4	2	-4	-2	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3391	False	NA	-11	True	AATAAA	-18	NA	125168668	125144971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_154901_23	chr6	-	5048	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	-420	1	-420	-1	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTGTCCTGGCTGGT	2975	False	NA	-10	True	AATAAA	-19	NA	125169084	125144970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_154909_16	chr6	-	2532	17	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	157	7854	-54	-12	5prime_fragment	FALSE	canonical	3	436	junction_6	45.8580946371521	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAACAAAAAACAAA	3552	False	NA	NA	False	TTTAAA	-26	NA	125168507	125152823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_154912_8	chr6	-	2371	7	FSM	ENSMUSG00000038213.8	ENSMUST00000043422.8	2352	7	-9	-10	-9	10	multi-exon	FALSE	canonical	1	1	junction_3	4.61880215351701	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTCTCTCCCTGTTGG	8504	False	NA	NA	False	AATAAA	-27	NA	125208832	125200885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125201673_125201826_125201914_125203453_125203760_125205025_125205365_125207107_125207381_125207517_125207761_125208496
Isoform_154917_852	chr6	-	1503	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	1	5	1	-5	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGGCATTTCCTCTCT	3462	False	NA	-13	True	AATAAA	-23	NA	125263004	125255241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
Isoform_154918_293	chr6	-	1530	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	-28	7	-28	-7	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGAGGCATTTCCTCT	3433	False	NA	-15	True	AATAAA	-21	NA	125263033	125255243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
Isoform_154919_62	chr6	-	2080	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	27	0	27	0	multi-exon	FALSE	canonical	3	11	junction_6	2.62936879248872	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGGTTTTATGTGG	NA	False	NA	0	True	AATAAA	-21	NA	125290821	125283533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
Isoform_154920_4	chr6	-	2165	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	-60	2	-60	-2	multi-exon	FALSE	canonical	3	11	junction_6	2.62936879248872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCTTGGGTTTTATGT	NA	False	NA	-2	True	AATAAA	-19	NA	125290908	125283535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
Isoform_154923_13	chr6	-	2992	17	FSM	ENSMUSG00000038167.7	ENSMUST00000042647.7	3299	17	306	1	306	-1	multi-exon	FALSE	canonical	0	0	junction_7	3.59198326137525	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAACATGGTTGTTTGGT	NA	False	NA	NA	False	TATAAA	-7	NA	125357450	125339623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125339831_125340004_125340683_125341546_125341699_125347343_125347460_125347544_125347678_125349020_125349141_125349440_125349579_125349775_125349926_125350069_125350181_125351491_125351642_125351936_125351988_125352205_125352302_125352686_125352852_125354344_125354501_125355664_125355874_125356717_125356940_125357312
Isoform_154931_6113	chr6	-	1159	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	69	0	69	0	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	6113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	NA	False	NA	-10	True	AATAAA	-15	NA	125471685	125437228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
Isoform_154932_283	chr6	-	1208	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	20	0	20	0	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9986	False	NA	-10	True	AATAAA	-15	NA	125471734	125437228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
Isoform_154945_1617	chr6	-	1212	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	0	233	0	42	multi-exon	FALSE	canonical	3	1115	junction_7	83.3223259396904	1617	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAAGTGTCTTTCTTGAC	NA	False	NA	-6	True	ATTAAA	-20	NA	126826088	126798916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
Isoform_15495_537	chr11	-	3429	14	FSM	ENSMUSG00000038909.17	ENSMUST00000107733.10	3470	14	41	0	3	0	multi-exon	FALSE	canonical	3	281	junction_9	177.090656421269	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201031	95165084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
Isoform_154951_6	chr6	-	1120	5	ISM	ENSMUSG00000030345.17	ENSMUST00000078521.7	2252	15	36402	-10	-53	10	3prime_fragment	FALSE	canonical	2	4	junction_4	3.57071421427143	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCTATGCCAATCAGGA	NA	False	NA	-2	True	AATAAA	-27	NA	126862400	126852972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_126853514_126854122_126854302_126857187_126857318_126860989_126861051_126862191
Isoform_154952_4	chr6	-	1871	9	NIC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	86.0144428279344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCATGCCTCGCCTA	5266	False	NA	-8	True	AATAAA	-18	NA	126916549	126900380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911669_126911813_126912915_126912972_126916456
Isoform_154953_108	chr6	-	1860	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	5	368	5	-3	multi-exon	FALSE	canonical	3	81	junction_4	57.8721651573535	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCATGCCTCGCCTA	5270	False	NA	-8	True	AATAAA	-18	NA	126916545	126900380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_154955_5	chr6	-	1610	9	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	6	-262	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	81.3460970176197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCATTGATACCATGT	5271	False	NA	-16	True	AATAAA	-18	NA	126916544	126900639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911669_126911813_126912915_126912972_126916456
Isoform_154957_103	chr6	-	1816	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	51	4	10	-4	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5316	False	NA	-9	True	AATAAA	-17	NA	126916499	126900381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_154958_18	chr6	-	1602	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	4	265	4	-265	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATGCTCATTGATACCA	5269	False	NA	-19	True	AATAAA	-15	NA	126916546	126900642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_154960_5	chr6	-	1936	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	-68	3	-68	-3	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCATGCCTCGCCTA	5197	False	NA	-8	True	AATAAA	-18	NA	126916618	126900380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_154962_7	chr6	-	2297	8	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	5	-3	intron_retention	FALSE	canonical	3	195	junction_2	26.1635359277927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCATGCCTCGCCTA	5286	False	NA	-8	True	AATAAA	-18	NA	126916529	126900380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_154966_5	chr6	-	1917	9	NNC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	85.1909619619358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTGCATGCCTCGCC	5266	False	NA	-10	True	AATAAA	-16	NA	126916549	126900382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_126901304_126901880_126902083_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_154969_4	chr6	-	4183	6	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	1	-5	intron_retention	FALSE	canonical	3	217	junction_2	21.8027521198586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTGCATGCCTCGCC	5266	False	NA	-10	True	AATAAA	-16	NA	126916549	126900382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_154970_3	chr6	-	5956	5	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	222	junction_2	18.5926732881531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCATGCCTCGCCTA	5260	False	NA	-8	True	AATAAA	-18	NA	126916555	126900380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_126903481_126904500_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_154973_17	chr6	-	1343	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	-46	2354	-39	411	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTCAGAGTGAAGC	NA	False	NA	-10	True	AAGAAA	-39	NA	127086559	127064432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
Isoform_154974_442	chr6	-	1297	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	2354	0	411	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTCAGAGTGAAGC	NA	False	NA	-10	True	AAGAAA	-39	NA	127086513	127064432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
Isoform_154984_45	chr6	-	3643	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	2	6	2	-6	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGTTTAGGTCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	127086511	127062084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
Isoform_154991_13	chr6	-	2715	10	FSM	ENSMUSG00000030350.9	ENSMUST00000032500.9	2724	10	7	2	7	-2	multi-exon	FALSE	canonical	1	4	junction_7	3.18948890986829	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGAGTACCTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	127746428	127665975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_127666872_127667572_127667695_127674647_127674799_127680839_127680956_127688104_127688193_127688744_127688888_127703487_127703552_127706372_127706529_127709597_127709784_127745635
Isoform_154994_5	chr6	-	4007	10	NIC	ENSMUSG00000030352.16	novel	1405	9	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	41.0558186730405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAACCAGACTGTTA	6166	False	NA	-11	True	AATAAA	-17	NA	128120523	127938367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128054989_128055090_128060344_128060445_128120476
Isoform_154996_295	chr6	-	3918	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	-11	-2502	-8	-9	multi-exon	FALSE	canonical	3	88	junction_5	10.9971587239614	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAACCAGACTGTTA	6155	False	NA	-11	True	AATAAA	-17	NA	128120534	127938367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
Isoform_154999_10	chr6	-	3825	8	FSM	ENSMUSG00000030352.16	ENSMUST00000112173.8	3819	8	-15	9	-15	-9	multi-exon	FALSE	canonical	0	0	junction_7	35.3305094494713	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAACCAGACTGTTA	6148	False	NA	-11	True	AATAAA	-17	NA	128120541	127938367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128120476
Isoform_15500_242	chr11	-	3410	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	222.401444165419	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201029	95165084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
Isoform_155000_6	chr6	-	3926	8	NNC	ENSMUSG00000030352.16	novel	3819	8	NA	NA	-42674	-9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	33.9807868883435	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAACCAGACTGTTA	NA	False	NA	-11	True	AATAAA	-17	NA	128054642	127938367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128054476
Isoform_155003_7	chr6	-	3092	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	-16	0	-6	0	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGTGAGAACTTCAACTC	1341	False	NA	-7	True	NA	NA	NA	128277792	128204105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_155004_21	chr6	-	2714	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	362	0	287	0	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGTGAGAACTTCAACTC	1719	False	NA	-7	True	NA	NA	NA	128277414	128204105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_155008_19	chr6	-	2776	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	305	-5	230	5	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACTTCAACTCCAGCT	1662	False	NA	-2	True	NA	NA	NA	128277471	128204100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_15501_92	chr11	-	3320	13	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	258.98824244012	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201029	95165084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
Isoform_155010_22	chr6	-	1775	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	260	1041	185	-3	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGAGGAGCTAGTTT	1617	False	NA	-8	True	AATAAA	-16	NA	128277516	128205146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_155014_10	chr6	-	5620	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	312	-2856	237	1	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATCTGCGCTCGTGTGAT	1669	False	NA	-3	True	NA	NA	NA	128277464	128201249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_155016_3	chr6	-	2613	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	10826	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.7632111220146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGTGAGAACTTCAACTCC	NA	False	NA	-6	True	NA	NA	NA	128266875	128204104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128266820
Isoform_155017_11	chr6	-	2589	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	358	-1038	283	0	multi-exon	FALSE	canonical	3	25	junction_7	24.4991836598692	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGTGAGAACTTCAACTC	1715	False	NA	-7	True	NA	NA	NA	128277418	128204105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_155023_8	chr6	-	5487	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	318	-3896	243	3	multi-exon	TRUE	canonical	3	25	junction_7	24.4991836598692	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCGCTCGTGTGATTT	1675	False	NA	-1	True	NA	NA	NA	128277458	128201247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_155024_102	chr6	-	3337	11	FSM	ENSMUSG00000001521.13	ENSMUST00000001562.9	3374	11	33	4	-3	-4	multi-exon	FALSE	canonical	3	32	junction_5	4.7169905660283	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTCGCTTTCCCAGAA	7524	False	NA	-24	True	AATAAA	-14	NA	128332781	128298127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
Isoform_155029_12	chr6	-	1955	3	ISM	ENSMUSG00000048668.17	ENSMUST00000112152.8	2015	4	-77	320	-21	40	intron_retention	FALSE	canonical	3	55	junction_2	142.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTGCCTCGAACTAAT	453	False	NA	-3	True	TATAAA	-17	NA	128339852	128334282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_128335157_128336068_128336318_128339020
Isoform_155034_4	chr6	-	1496	5	NNC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	138.179231435118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTCGTGCCCATCT	454	False	NA	-8	True	AATAAA	-40	NA	128339851	128334323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_128335157_128336068_128336318_128339020_128339148_128339330_128339568_128339801
Isoform_155035_63	chr6	-	1282	4	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	-5	37	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	133.417473451652	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTTCTGCCTCGAACT	469	False	NA	-6	True	TATAAA	-14	NA	128339836	128334285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_128335157_128336068_128336318_128339020_128339148_128339801
Isoform_155036_7	chr6	-	1604	4	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	133.417473451652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGCCTGTCTCAGTGGT	469	False	NA	NA	False	CATAAA	-33	NA	128339836	128333963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_128335157_128336068_128336318_128339020_128339148_128339801
Isoform_155037_7	chr6	-	1487	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	134	-37	-39	37	multi-exon	FALSE	canonical	3	41	junction_2	149.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTTCTGCCTCGAACT	608	False	NA	-6	True	TATAAA	-14	NA	128339697	128334285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128335157_128336068_128336318_128339330
Isoform_155038_19	chr6	-	1582	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	0	2	0	-2	multi-exon	FALSE	canonical	3	41	junction_2	149.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGCCTCGTGCCCATC	474	False	NA	-9	True	AATAAA	-39	NA	128339831	128334324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128335157_128336068_128336318_128339330
Isoform_15504_7	chr11	-	2231	2	FSM	ENSMUSG00000046719.8	ENSMUST00000058866.8	2099	2	-132	0	-132	0	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATTCTAAGTAATCCAG	NA	False	NA	1	True	AATAAA	-20	NA	95405528	95400670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95402359_95404985
Isoform_155040_4	chr6	-	1354	4	NNC	ENSMUSG00000048668.17	novel	1584	3	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	150.431231981778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTCGTGCCCATCT	469	False	NA	-8	True	AATAAA	-40	NA	128339836	128334323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_128335157_128336068_128336318_128339330_128339568_128339801
Isoform_155041_161	chr6	-	1172	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	-21	-43	-21	38	multi-exon	FALSE	canonical	3	139	junction_2	100.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTCTGCCTCGAACTA	453	False	NA	-5	True	TATAAA	-15	NA	128339852	128334284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128335157_128336068_128336318_128339801
Isoform_155042_9	chr6	-	1494	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	-21	-365	-21	0	multi-exon	FALSE	canonical	3	139	junction_2	100.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTGTCTCAGTGGTC	453	False	NA	NA	False	CATAAA	-34	NA	128339852	128333962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128335157_128336068_128336318_128339801
Isoform_155044_828	chr6	-	2307	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	13	0	0	0	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401881	128386406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
Isoform_15505_12	chr11	-	2143	2	FSM	ENSMUSG00000046719.8	ENSMUST00000058866.8	2099	2	-51	7	-51	-7	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTATTCTATTCTAAGT	NA	False	NA	-6	True	AATAAA	-13	NA	95405447	95400677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95402359_95404985
Isoform_155051_16	chr6	-	2117	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	15	0	intron_retention	FALSE	canonical	3	13	junction_8	79.0465685529739	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401860	128386406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128393219_128393262_128394579_128394676_128401680
Isoform_155056_25	chr6	-	2381	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	237	junction_2	19.4216374180963	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCAGCTCTCCAATCTG	NA	False	NA	-3	True	AATAAA	-21	NA	128401883	128386409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
Isoform_15507_776	chr11	-	3400	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	37	9	37	-9	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAACGATGC	NA	False	NA	NA	False	ATTAAA	-6	NA	95478524	95459652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
Isoform_15508_22	chr11	-	3434	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	3	9	3	-9	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAACGATGC	NA	False	NA	NA	False	ATTAAA	-6	NA	95478558	95459652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
Isoform_155088_7648	chr6	-	2195	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	19	3	19	-3	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	7648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGGTGTCAGGCAAC	9288	False	NA	-24	True	AATAAA	-13	NA	128415621	128407068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
Isoform_155107_10	chr6	-	626	7	ISM	ENSMUSG00000030359.15	ENSMUST00000112132.8	4681	36	38804	6	-61	-6	3prime_fragment	FALSE	canonical	3	30	junction_1	17.1464281994822	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTGGGTTTTTTTTTC	NA	False	NA	-1	True	AATAAA	-14	NA	128464879	128460535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_128460690_128461826_128461869_128462520_128462624_128463080_128463150_128463855_128463947_128464365_128464497_128464843
Isoform_155108_5	chr6	-	811	6	FSM	ENSMUSG00000030188.13	ENSMUST00000173198.8	561	6	-62	-188	31	0	multi-exon	FALSE	canonical	2	2	junction_5	222.978563992147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	TATAAA	-19	NA	131270176	131261475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131268703_131268904_131270034
Isoform_155110_13	chr6	-	741	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	28	-2	28	2	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAATAGGTATTTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	131270179	131261348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
Isoform_155121_2570	chr6	-	1866	10	FSM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	-16	3	-16	-3	multi-exon	FALSE	canonical	3	2076	junction_5	391.631661162235	2570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4955	False	NA	-12	True	AATAAA	-18	NA	131365417	131341820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
Isoform_155126_56	chr6	-	2015	10	FSM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	-165	3	-127	-3	multi-exon	FALSE	canonical	3	2076	junction_5	391.631661162235	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4806	False	NA	-12	True	AATAAA	-18	NA	131365566	131341820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
Isoform_15513_10	chr11	-	2945	11	FSM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	16	-1239	16	1239	multi-exon	FALSE	canonical	3	16	junction_4	6.67907179179862	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	2906	False	NA	NA	False	NA	NA	NA	95805701	95755529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
Isoform_155133_609	chr6	-	1660	9	FSM	ENSMUSG00000030189.16	ENSMUST00000087865.4	1684	9	21	3	-17	-3	multi-exon	FALSE	canonical	3	624	junction_4	774.912807595151	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4954	False	NA	-12	True	AATAAA	-18	NA	131365418	131341820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
Isoform_155141_4	chr6	-	963	2	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53547	-6543	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134326831	134292456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_134293294_134326705
Isoform_155147_56	chr6	-	9429	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-73	12	-21	-12	multi-exon	FALSE	canonical	3	65	junction_12	12.4923116851794	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGAAAATGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	134543949	134423450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
Isoform_155151_17	chr6	-	1589	2	ISM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-60	94312	-8	-14	5prime_fragment	FALSE	canonical	3	105	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATAAAAACAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	134543936	134517750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_134519009_134543605
Isoform_155152_7	chr6	-	2318	4	FSM	ENSMUSG00000032718.5	ENSMUST00000047443.5	2376	4	59	-1	59	1	multi-exon	TRUE	canonical	3	7	junction_1	3.09120616516523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGGATAGCTTTCAAT	NA	False	NA	NA	False	AATAAA	-22	NA	134609392	134586168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_134587815_134594279_134594421_134598695_134599013_134609178
Isoform_155153_8	chr6	-	2255	4	FSM	ENSMUSG00000032718.5	ENSMUST00000047443.5	2376	4	120	1	120	-1	multi-exon	FALSE	canonical	3	7	junction_1	3.09120616516523	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCTGGATAGCTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	134609331	134586170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_134587815_134594279_134594421_134598695_134599013_134609178
Isoform_155154_109	chr6	-	5199	7	FSM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	-95	0	-95	0	multi-exon	FALSE	canonical	3	50	junction_6	14.7309198626562	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTGAGACGTGGCT	NA	False	NA	-3	True	AATAAA	-24	NA	134769683	134692435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
Isoform_155158_5	chr6	-	3243	8	NNC	ENSMUSG00000030203.18	novel	5104	7	NA	NA	-95	441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	28.6491799220166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAGGATACGGACATCA	NA	False	NA	NA	False	AATAAA	-18	NA	134769683	134694336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239_134769592_134769646
Isoform_155161_3	chr6	-	1774	4	FSM	ENSMUSG00000032641.19	ENSMUST00000203762.4	498	4	-186	-1090	-122	-2	multi-exon	FALSE	canonical	2	12	junction_1	13.9124245031395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAATTGATTTACTT	NA	False	NA	-20	True	ATTAAA	-15	NA	134864917	134846121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_134847407_134854179_134854298_134863853_134863900_134864592
Isoform_155163_3	chr6	-	1721	6	NIC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	28.4422221354099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAATTGATTTACTT	NA	False	NA	-20	True	ATTAAA	-15	NA	134874858	134846121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_134847407_134854179_134854298_134863853_134863900_134864592_134864749_134874124_134874177_134874794
Isoform_155164_8	chr6	-	1557	3	FSM	ENSMUSG00000032641.19	ENSMUST00000215088.2	1484	3	-64	-9	-17	4	multi-exon	FALSE	canonical	3	13	junction_1	14.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGATTTACTTAGTTTT	NA	False	NA	-14	True	ATTAAA	-21	NA	134864812	134846115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_134847407_134863853_134863900_134864592
Isoform_155165_3	chr6	-	1678	3	FSM	ENSMUSG00000032641.19	ENSMUST00000215088.2	1484	3	-185	-9	-138	4	multi-exon	FALSE	canonical	3	13	junction_1	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGATTTACTTAGTTTT	NA	False	NA	-14	True	ATTAAA	-21	NA	134864933	134846115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_134847407_134863853_134863900_134864592
Isoform_155166_10	chr6	-	1611	5	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	-10	4	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.3664085533089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGATTTACTTAGTTTT	NA	False	NA	-14	True	ATTAAA	-21	NA	134874860	134846115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_134847407_134863853_134863900_134864592_134864749_134874124_134874177_134874794
Isoform_155168_6	chr6	-	1578	2	ISM	ENSMUSG00000032641.19	ENSMUST00000165392.8	1643	4	9951	8	-32	7	3prime_fragment	FALSE	canonical	3	94	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTATGGTTCCTGTG	NA	False	NA	-11	True	ACTAAA	-26	NA	134864827	134846063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_134847407_134864592
Isoform_155170_30	chr6	-	1498	2	ISM	ENSMUSG00000032641.19	ENSMUST00000111932.8	1711	5	10020	-2	-11	2	3prime_fragment	FALSE	canonical	3	94	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGAATTGATTTACT	NA	False	NA	-21	True	ATTAAA	-14	NA	134864806	134846122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_134847407_134864592
Isoform_155171_3	chr6	-	1903	4	NIC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	34.4512538072113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCACTATTGATT	NA	False	NA	-23	True	TATAAA	-45	NA	134874854	134846075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_134847407_134864592_134864749_134873820_134874177_134874794
Isoform_155172_4	chr6	-	1858	4	NIC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	34.4512538072113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATTGATTTACTTAG	NA	False	NA	-18	True	ATTAAA	-17	NA	134874853	134846119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_134847407_134864592_134864749_134873820_134874177_134874794
Isoform_155174_20	chr6	-	1637	4	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	8.64098759787715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGTTCCTGTGGATTTT	NA	False	NA	-5	True	ACTAAA	-32	NA	134874874	134846057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_134847407_134864592_134864749_134874124_134874177_134874794
Isoform_155176_5	chr6	-	1584	3	NIC	ENSMUSG00000032641.19	novel	1484	3	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGTGAGAATTGATTT	NA	False	NA	-24	True	ATTAAA	-11	NA	134864810	134846125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_134847446_134863853_134863900_134864592
Isoform_155178_6	chr6	-	1604	2	ISM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	10009	-9	-17	-6	3prime_fragment	FALSE	canonical	3	36	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTATGGTTCCTGTGGA	NA	False	NA	-9	True	ACTAAA	-28	NA	134864812	134846061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_134847446_134864592
Isoform_155179_13	chr6	-	1549	2	ISM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	10009	46	-17	3	3prime_fragment	FALSE	canonical	3	36	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGATTTACTTAGTTT	NA	False	NA	-15	True	ATTAAA	-20	NA	134864812	134846116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_134847446_134864592
Isoform_155181_7	chr6	-	1647	4	FSM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	-26	-11	3	-4	multi-exon	FALSE	canonical	3	36	junction_1	18.9267594221045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGGTTCCTGTGGATT	NA	False	NA	-7	True	ACTAAA	-30	NA	134874847	134846059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_134847446_134864592_134864749_134874124_134874177_134874794
Isoform_155182_20	chr6	-	1592	4	FSM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	-33	51	-4	-2	multi-exon	FALSE	canonical	3	36	junction_1	18.9267594221045	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAATTGATTTACTT	NA	False	NA	-20	True	ATTAAA	-15	NA	134874854	134846121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_134847446_134864592_134864749_134874124_134874177_134874794
Isoform_155183_524	chr6	-	999	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	62	-3	-18	3	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTTTAAATTATTTCC	NA	False	NA	-26	True	AATACA	-23	NA	135145151	135114516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
Isoform_155184_142	chr6	-	1039	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	20	-1	-3	1	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAGTTTTAAATTATTT	NA	False	NA	-28	True	AATACA	-21	NA	135145193	135114518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
Isoform_155188_77	chr6	-	1933	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	70	7	15	-7	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCATCTGTGGTCCTGC	NA	False	NA	-7	True	AATAAA	-10	NA	136638856	136589074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
Isoform_155189_6	chr6	-	2320	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	-312	2	-312	-2	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGGTCCTGCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	136639238	136589069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
Isoform_155190_16	chr6	-	2057	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	-49	2	-49	-2	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGGTCCTGCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	136638975	136589069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
Isoform_155206_2549	chr6	-	2659	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	80	0	-10	0	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	2549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTTTGTGTAATG	2912	False	NA	-1	True	AATAAA	-19	NA	136805151	136790651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
Isoform_155208_41	chr6	-	2698	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	41	0	41	0	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTTTGTGTAATG	2873	False	NA	-1	True	AATAAA	-19	NA	136805190	136790651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
Isoform_155217_11	chr6	-	1143	6	FSM	ENSMUSG00000030220.14	ENSMUST00000032344.12	1193	6	50	0	50	0	multi-exon	FALSE	canonical	3	8	junction_3	3.18747549010185	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGAGTTGTCTTATGC	5621	False	NA	NA	False	AATAAA	-20	NA	136918704	136900652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918648
Isoform_155218_115	chr6	-	2228	5	FSM	ENSMUSG00000030222.14	ENSMUST00000117919.8	2262	5	35	-1	11	1	multi-exon	FALSE	canonical	3	37	junction_2	7.44983221287567	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTTGGAATTCTTTT	NA	False	NA	-11	True	AATAAA	-15	NA	137146695	137031827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137146477
Isoform_155220_5	chr6	-	4085	22	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-18	-29	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	33.102397307189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATAGCTTCTATCTC	4023	False	NA	-29	True	AATAAA	-18	NA	137626258	137454694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516395_137568415_137568491_137626049
Isoform_155224_175	chr6	-	4118	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	21	428	21	-5	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAGAATGTTTGCTTGG	4019	False	NA	-5	True	AATAAA	-42	NA	137626262	137454670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
Isoform_155228_20	chr6	-	4538	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	27	2	-16	-2	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTGGTTGAAAATTAGC	4025	False	NA	NA	False	AATAAA	-16	NA	137626256	137454244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
Isoform_155235_9	chr6	-	4041	21	FSM	ENSMUSG00000015766.15	ENSMUST00000111878.8	3560	21	23	-504	-20	-5	multi-exon	FALSE	canonical	0	0	junction_20	34.6389953664941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAGAATGTTTGCTTGG	4021	False	NA	-5	True	AATAAA	-42	NA	137626260	137454670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137626049
Isoform_155237_34	chr6	-	4035	21	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	21	-8	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	31.4249502784014	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACACCAGAATGTTTGCT	4019	False	NA	-8	True	AATAAA	-39	NA	137626262	137454673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137626049
Isoform_155242_3	chr6	-	4987	16	NIC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	5	0	intron_retention	TRUE	canonical	1	2	junction_1	39.7130820875047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAATGATGGCTTTTT	6198	False	NA	NA	False	AATAAA	-24	NA	142332795	142302672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142305719_142308531_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
Isoform_155246_3	chr6	-	3168	15	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	222	intron_retention	FALSE	canonical	2	3	junction_14	40.4629460123704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCGTTTCACCAATTAAG	6181	False	NA	-1	True	ATTAAA	-20	NA	142332812	142307624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332444
Isoform_155247_3	chr6	-	2917	15	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	-29	intron_retention	FALSE	canonical	2	3	junction_14	40.4629460123704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTTTATTTC	6181	False	NA	-28	True	ATTAAA	-11	NA	142332812	142307875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332444
Isoform_155248_10	chr6	-	3513	15	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	17	-6	intron_retention	FALSE	canonical	3	14	junction_14	37.9085903785645	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGGAAAGAGGAGACCT	6210	False	NA	NA	False	AATAAA	-20	NA	142332783	142307107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332587
Isoform_155251_104	chr6	-	2604	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	14	771	1	-26	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTTCTTTATTTCTTT	6194	False	NA	-25	True	ATTAAA	-14	NA	142332799	142307872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
Isoform_155252_57	chr6	-	2851	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	14	524	1	221	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCGTTTCACCAATTAA	6194	False	NA	-2	True	ATTAAA	-19	NA	142332799	142307625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
Isoform_155254_44	chr6	-	3377	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	14	-2	1	2	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAGACCTATCTTAGA	6194	False	NA	NA	False	AATAAA	-28	NA	142332799	142307099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
Isoform_155256_6	chr6	-	2813	14	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	223	intron_retention	FALSE	canonical	2	13	junction_13	39.2829215944293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCGTTTCACCAATTAAGA	6186	False	NA	0	True	ATTAAA	-21	NA	142332807	142307623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142332747
Isoform_155257_6	chr6	-	2554	14	NIC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	0	-29	intron_retention	FALSE	canonical	2	13	junction_13	39.2829215944293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTTTATTTC	6193	False	NA	-28	True	ATTAAA	-11	NA	142332800	142307875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142332747
Isoform_155258_9	chr6	-	4128	13	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	-29	intron_retention	FALSE	canonical	3	113	junction_12	19.6468827043885	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTTTATTTC	6194	False	NA	-28	True	ATTAAA	-11	NA	142332799	142307875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
Isoform_155267_1774	chr6	-	1268	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	22	-3	22	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453647	142435974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
Isoform_155268_39	chr6	-	1303	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239395.2	1304	8	0	1	0	-1	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGCCTGCCTTTTTCT	NA	False	NA	-5	True	AATAAA	-18	NA	142453683	142435975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
Isoform_155269_75	chr6	-	2748	7	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	24	-1	intron_retention	FALSE	canonical	3	685	junction_1	70.5275753793429	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGCCTGCCTTTTTCT	NA	False	NA	-5	True	AATAAA	-18	NA	142453645	142435975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142436331_142438218_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
Isoform_155270_25	chr6	-	1150	7	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	308.522104376476	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453653	142435974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142436331_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
Isoform_155273_3	chr6	-	2080	5	FSM	ENSMUSG00000030283.8	ENSMUST00000032421.4	8991	5	278	6633	-33	54	multi-exon	FALSE	canonical	2	8	junction_4	3.11247489949718	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAAGTCTACTTAGCATG	NA	False	NA	NA	False	TTTAAA	-26	NA	142909900	142773903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142774997_142813579_142813673_142822373_142822484_142859749_142859895_142909261
Isoform_155275_55	chr6	-	4287	26	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	20.7068684257181	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAACTCTTTGCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	143045544	142956650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
Isoform_155278_164	chr6	-	4425	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	21.2642225290113	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045820	142956652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_155279_8	chr6	-	4303	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	4	junction_26	34.3139007835345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTCCTAACTCTTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	143045866	142956655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045823
Isoform_155281_14	chr6	-	4326	26	FSM	ENSMUSG00000030279.16	ENSMUST00000203187.3	3494	26	-27	-805	-8	0	multi-exon	FALSE	canonical	3	13	junction_3	32.7664218369965	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	143045824	142956653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_155282_13	chr6	-	4155	24	FSM	ENSMUSG00000030279.16	ENSMUST00000204655.3	3526	24	-74	-555	8	1	multi-exon	FALSE	canonical	3	38	junction_3	28.8381180218075	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045567	142956652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
Isoform_155284_20	chr6	-	4314	25	FSM	ENSMUSG00000030279.16	ENSMUST00000171349.8	4292	25	-29	7	5	1	multi-exon	FALSE	canonical	3	38	junction_3	28.9653768412489	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045862	142956652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_155285_28	chr6	-	4270	25	FSM	ENSMUSG00000030279.16	ENSMUST00000171349.8	4292	25	17	5	0	0	multi-exon	FALSE	canonical	3	38	junction_3	28.9653768412489	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAACTCTTTGCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	143045816	142956650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_155287_4	chr6	-	3443	21	ISM	ENSMUSG00000030279.16	ENSMUST00000203349.3	4584	22	258	1019	0	-1019	3prime_fragment	FALSE	canonical	3	110	junction_6	16.1662456989865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTATGTGTGTGTTCA	NA	False	NA	NA	False	NA	NA	NA	143045575	142974057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
Isoform_155289_9	chr6	-	3548	22	FSM	ENSMUSG00000030279.16	ENSMUST00000203349.3	4584	22	13	1023	-4	-1023	multi-exon	FALSE	canonical	3	110	junction_6	17.6396276203619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATGTATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	143045820	142974061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_155308_375	chr6	-	2517	11	FSM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	-4	5320	-4	3	multi-exon	FALSE	canonical	3	243	junction_10	1157.84085262181	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	NA	False	NA	-21	True	AATAAA	-19	NA	144994542	144944880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144994288
Isoform_155312_7595	chr6	-	2423	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	136	-3	136	3	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	7595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8621	False	NA	-21	True	AATAAA	-19	NA	145021774	144944880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
Isoform_155313_383	chr6	-	2575	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	-16	-3	-16	3	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8469	False	NA	-21	True	AATAAA	-19	NA	145021926	144944880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
Isoform_155314_4512	chr6	-	2473	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	86	-3	86	3	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	4512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8571	False	NA	-21	True	AATAAA	-19	NA	145021824	144944880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
Isoform_155318_312	chr6	-	2866	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	-307	-3	-307	3	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8178	False	NA	-21	True	AATAAA	-19	NA	145022217	144944880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
Isoform_155357_27	chr6	-	2013	6	FSM	ENSMUSG00000030265.15	ENSMUST00000111710.8	1194	6	-52	-767	10	502	multi-exon	FALSE	canonical	3	20	junction_2	471.744252747185	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTCGATGTTCGCT	NA	False	NA	-11	True	AATAAA	-8	NA	145195955	145165203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_145166451_145170799_145170924_145177820_145177981_145179973_145180153_145192420_145192543_145195774
Isoform_155365_557	chr6	-	4639	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	34	5	-3	-5	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGTGTGTAATTATGTA	NA	False	NA	-13	True	AATAAA	-17	NA	145195931	145162429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
Isoform_155366_798	chr6	-	1899	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	1	2778	1	503	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTCGATGTTCGCTT	NA	False	NA	-10	True	AATAAA	-9	NA	145195964	145165202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
Isoform_15537_538	chr11	-	2377	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	705	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95873437	95853556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
Isoform_155391_91	chr6	-	3015	18	FSM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	43	1	-12	-1	multi-exon	FALSE	canonical	3	82	junction_2	56.6296167637544	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCGGAGTGTTACTTTA	NA	False	NA	-3	True	AATAAA	-25	NA	146479290	146451130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_155392_20	chr6	-	3042	18	FSM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	16	1	16	-1	multi-exon	FALSE	canonical	3	82	junction_2	56.6296167637544	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCGGAGTGTTACTTTA	NA	False	NA	-3	True	AATAAA	-25	NA	146479317	146451130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_155395_20	chr6	-	2880	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	57.4303586420109	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479280	146451131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_155399_61	chr6	-	2988	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479340	146451129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_155400_202	chr6	-	2924	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCGGAGTGTTACTTTA	NA	False	NA	-3	True	AATAAA	-25	NA	146479277	146451130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_155403_8	chr6	-	2513	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	328	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_14	63.7024332345319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCCAAGTATCGGAGT	NA	False	NA	-12	True	AATAAA	-16	NA	146478950	146451139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146477722_146477959_146478798
Isoform_155422_986	chr6	-	3175	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	58	8	-41	-8	multi-exon	FALSE	canonical	3	689	junction_8	114.912830779186	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146536037	146503857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
Isoform_155427_77	chr6	-	3212	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	22	7	22	-7	multi-exon	FALSE	canonical	3	689	junction_8	114.912830779186	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGCTTAATGTCCTC	NA	False	NA	NA	False	AATAAA	-13	NA	146536073	146503856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
Isoform_155445_17	chr6	-	2827	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-964	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	251.358274676846	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113519	148081540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
Isoform_155455_312	chr6	-	2854	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	353	967	0	-967	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGTTTAAAGCAAACT	NA	False	NA	-15	True	ATTAAA	-14	NA	148113519	148081543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
Isoform_155456_115	chr6	-	3314	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	353	507	0	-507	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCTACCTCCTGAGATA	NA	False	NA	-6	True	AATAAA	-26	NA	148113519	148081083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
Isoform_155457_26	chr6	-	2889	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	320	965	-32	-965	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTTAAAGCAAACTTT	NA	False	NA	-13	True	ATTAAA	-16	NA	148113552	148081541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
Isoform_155459_321	chr6	-	1623	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	353	2198	0	33	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACTAGTCTAGACTT	NA	False	NA	-32	True	AATAAA	-15	NA	148113519	148082774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
Isoform_15546_3939	chr11	-	2813	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-3	5568	-3	705	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	3939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95896769	95853556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
Isoform_155467_31	chr6	-	3866	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	353	-45	0	45	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTCAGCATGTCATT	NA	False	NA	NA	False	AAGAAA	-23	NA	148113519	148080531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
Isoform_15548_116	chr11	-	3009	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-199	5568	-199	705	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95896965	95853556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
Isoform_155489_50	chr6	-	5342	25	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	10	-2	combination_of_known_junctions	TRUE	canonical	3	31	junction_1	45.5182350517045	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTGCTCTATGGG	NA	False	NA	-3	True	AATAAA	-25	NA	148732952	148672182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_148674305_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
Isoform_155498_301	chr6	-	5345	25	FSM	ENSMUSG00000040029.16	ENSMUST00000048418.14	5360	25	13	2	10	-2	multi-exon	FALSE	canonical	3	188	junction_1	23.3505516827524	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTGCTCTATGGG	NA	False	NA	-3	True	AATAAA	-25	NA	148732952	148672182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
Isoform_155503_6	chr6	-	5212	24	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_16	51.0872340417994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGAACTCTGTCTGCT	NA	False	NA	-10	True	AATAAA	-18	NA	148732961	148672189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
Isoform_155509_19	chr6	-	4500	18	ISM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	57	1	-18	0	intron_retention	FALSE	canonical	3	65	junction_10	8.75226120065937	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797678	148743990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
Isoform_155510_82	chr6	-	3640	19	FSM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	57	0	-18	0	multi-exon	FALSE	canonical	3	65	junction_10	9.04805415272352	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797678	148743989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
Isoform_155511_6	chr6	-	3689	19	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	20.5087304505022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797678	148743990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796705_148797515
Isoform_155512_23	chr6	-	2982	18	FSM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	-30	0	-18	0	multi-exon	FALSE	canonical	3	19	junction_10	17.2566621205624	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797678	148743990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
Isoform_155514_4	chr6	-	4918	19	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	20.7879505697144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797678	148743989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_148746175_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
Isoform_155526_40	chr6	-	2687	6	FSM	ENSMUSG00000039985.15	ENSMUST00000081956.12	2737	6	41	9	27	-9	multi-exon	FALSE	canonical	3	93	junction_5	848.577303490967	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAGTTGTCTCATG	NA	False	NA	NA	False	AATAAA	-16	NA	148846283	148822563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846086
Isoform_155531_96	chr6	-	2598	6	NIC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	1	-9	combination_of_known_junctions	FALSE	canonical	3	122	junction_5	837.245818144229	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAGTTGTCTCATG	NA	False	NA	NA	False	AATAAA	-16	NA	148847652	148822563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847544
Isoform_155533_3526	chr6	-	2638	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	28	31	4	-9	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	3526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAGTTGTCTCATG	NA	False	NA	NA	False	AATAAA	-16	NA	148847937	148822563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
Isoform_155543_5	chr6	-	4625	21	FSM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	123	5083	-19	-5083	multi-exon	FALSE	canonical	3	13	junction_11	5.03487835006964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGAGTAATTTTTTTAG	NA	False	NA	NA	False	TATAAA	-18	NA	149003055	148894651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
Isoform_155544_4	chr6	-	3189	4	ISM	ENSMUSG00000030313.16	ENSMUST00000150436.2	3160	14	-44	39088	2	-14981	5prime_fragment	FALSE	canonical	3	13	junction_3	7.87400787401181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGGCCTCAGAATGATG	NA	False	NA	NA	False	AATAAA	-21	NA	149003080	148954573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_148956586_148969547_148970215_148982303_148982414_149002680
Isoform_155545_7	chr6	-	1134	7	NIC	ENSMUSG00000068250.14	novel	1369	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	33.0840680019183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTGTCCCATATTTATT	NA	False	NA	-2	True	TATAAA	-28	NA	149090185	149059076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149089969
Isoform_155546_51	chr6	-	1010	7	FSM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	16	431	-1	0	multi-exon	FALSE	canonical	3	74	junction_5	14.7723465374402	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGTCCCATATTTATTT	NA	False	NA	-1	True	TATAAA	-29	NA	149090194	149059075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
Isoform_155547_5	chr6	-	888	6	NIC	ENSMUSG00000068250.14	novel	1457	7	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	34.1607962436475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTGTCCCATATTTATT	NA	False	NA	-2	True	TATAAA	-28	NA	149090206	149059076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149090103
Isoform_155548_6	chr6	-	731	5	NIC	ENSMUSG00000068250.14	novel	1457	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	42.3932482831877	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTCTATTGTCCCATA	NA	False	NA	-8	True	TATAAA	-22	NA	149090200	149059082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149090103
Isoform_155549_22	chr6	-	1698	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTAGCCTGGTAT	834	False	NA	-6	True	AATAAA	-19	NA	51989523	51836144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
Isoform_155550_14	chr6	-	3421	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTATGATGCTAATA	851	False	NA	-8	True	AATAAA	-15	NA	51989506	51834404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
Isoform_155552_23	chr6	-	999	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-4	-14475	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	202.243664919324	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGTGCCAAGCCCC	NA	False	NA	NA	False	NA	NA	NA	88423488	88289562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_88289791_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_155553_16	chr6	-	1568	11	NNC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	-3	-29224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0821280420765	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGACTTGCGCAAATAGC	NA	False	NA	NA	False	AATAAA	-19	NA	100648097	100579267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_100579574_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
Isoform_155556_7	chr6	-	659	3	Intergenic	novelGene_9355	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_2	7	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCAGCTTGTGTGCATT	NA	False	NA	NA	False	AGTAAA	-17	NA	48999401	48995451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_48995945_48997387_48997456_48999303
Isoform_155558_22	chr6	-	1772	8	NNC	ENSMUSG00000030101.16	novel	452	2	NA	NA	7	1930	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	32.630898090676	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGGTTTGGTCTTTG	2479	False	NA	NA	False	AATAAA	-25	NA	108162536	108119343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_108120149_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
Isoform_155559_11	chr6	-	1179	4	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53549	-1044	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	4.54606056566195	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGCAAAAGTATG	NA	False	NA	NA	False	NA	NA	NA	134326829	134286957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_134287767_134291473_134291617_134293190_134293294_134326705
Isoform_155560_5	chr6	-	1527	2	Genic_Genomic	ENSMUSG00000080932.4	novel	615	1	NA	NA	-8297	51	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	122684284	122675321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_122676037_122683472
Isoform_155562_5	chr6	-	5372	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	703	5	NA	NA	-5	-1482	multi-exon	FALSE	canonical	3	14	junction_1	14.5958898324152	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGGTTTCTGGATTTGTT	-11	True	NA	NA	False	ATTAAA	-14	NA	28261936	28212488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
Isoform_155565_7	chr6	-	398	2	NNC	ENSMUSG00000107479.2	novel	479	2	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCTGTGGCCATGG	NA	False	NA	NA	False	NA	NA	NA	66442703	66431175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_66431365_66442494
Isoform_155569_5	chr6	-	528	2	Intergenic	novelGene_9722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGACTTTTATTTTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	144930097	144907255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_144907643_144929956
Isoform_155572_4	chr6	-	3051	23	NNC	ENSMUSG00000030279.16	novel	4584	22	NA	NA	13	-99	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7347898638228	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGTTTCTATGTTTTG	NA	False	NA	NA	False	TTTAAA	-16	NA	143045854	142973137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_142973431_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_155573_4	chr6	-	3748	3	Antisense	novelGene_ENSMUSG00000029925.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAAGAGTCTGTTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	38972913	38962857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_38966312_38967960_38968143_38972801
Isoform_155575_272	chr6	+	3521	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	45	222	1	-6	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCAGGTGTGTGAGA	7	True	NA	16	True	AATAAA	-13	NA	3498426	3603309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
Isoform_155576_23	chr6	+	3743	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	45	0	1	0	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTCTTTGAATTCAA	7	True	NA	NA	False	TATAAA	-22	NA	3498426	3603531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
Isoform_155582_59	chr6	+	3841	18	FSM	ENSMUSG00000015189.13	ENSMUST00000015333.12	3961	18	119	1	9	-1	multi-exon	FALSE	canonical	3	22	junction_3	9.97574914150592	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATGTGTGGTTTTTGTT	30	False	NA	29	True	AATAAA	-40	NA	4600957	4643354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
Isoform_155584_4	chr6	+	4044	18	FSM	ENSMUSG00000015189.13	ENSMUST00000015333.12	3961	18	-95	12	-95	-12	multi-exon	TRUE	canonical	3	22	junction_3	9.97574914150592	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAATCAAGCCATGTG	-8	True	NA	18	True	AATAAA	-29	NA	4600743	4643343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
Isoform_155585_3	chr6	+	2780	11	NIC	ENSMUSG00000032827.16	novel	3046	15	NA	NA	-8	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	5.31883445878888	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAGAAATACAACAAA	-11	True	NA	NA	False	NA	NA	NA	4903311	5113778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_4903449_4905225_4906845_5045935_5046069_5057457_5057579_5062117_5062193_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600
Isoform_155586_3	chr6	+	2453	3	ISM	ENSMUSG00000042607.16	ENSMUST00000043294.12	3286	6	40268	4	33227	-4	3prime_fragment	FALSE	canonical	2	3	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTCTGGCGTTTCCTT	NA	False	NA	NA	False	AATAAA	-21	NA	5423653	5433018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_5423833_5429739_5429854_5430858
Isoform_155588_31	chr6	+	990	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	13	3320	10	-3320	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTATGTTGGGTGACC	-5	True	NA	8	True	AATAAA	-16	NA	6956016	7039659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_6956201_7038853
Isoform_155589_38	chr6	+	763	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	5	3555	2	-3555	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTCCAATAAGTTTGC	-13	True	NA	NA	False	AATAAA	-23	NA	6956008	7039424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_6956201_7038853
Isoform_155593_31	chr6	+	2523	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-73	3642	-73	-3642	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTCTTGTATTTGGTAC	-16	True	NA	7	True	ATTAAA	-20	NA	7844768	7872045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
Isoform_155595_50	chr6	+	6127	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-35	0	-35	0	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCATCTGTGTATTTT	-26	True	NA	16	True	AATAAA	-17	NA	7844806	7875687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
Isoform_155596_65	chr6	+	6098	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-11	5	-11	-5	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGCTTCATCTGTGT	-2	True	NA	11	True	AATAAA	-12	NA	7844830	7875682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
Isoform_155599_5	chr6	+	4508	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-74	1658	-74	-1658	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTGCATCATTGG	-17	True	NA	NA	False	AATAAA	-16	NA	7844767	7874029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
Isoform_155602_3	chr6	+	4984	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-97	1205	-97	-1205	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTGTTTTTCTACT	89	False	NA	NA	False	AATAAA	-20	NA	7844744	7874482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
Isoform_155604_14	chr6	+	2648	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-198	3642	-198	-3642	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTCTTGTATTTGGTAC	-12	True	NA	7	True	ATTAAA	-20	NA	7844643	7872045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
Isoform_155605_137	chr6	+	3666	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	34	10	34	-4	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGATAAACTTTGAAACT	16	True	NA	NA	False	AATAAA	-14	NA	8209255	8236264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_155606_273	chr6	+	3005	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	34	671	34	-665	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGATGTTTGAGTGA	16	True	NA	14	True	AATAAA	-17	NA	8209255	8235603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_155608_55	chr6	+	3033	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	6	671	6	-665	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGATGTTTGAGTGA	-12	True	NA	14	True	AATAAA	-17	NA	8209227	8235603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_155609_66	chr6	+	4026	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	33	-349	33	349	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTGTTCCATTTT	15	True	NA	NA	False	NA	NA	NA	8209254	8236623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_155610_26	chr6	+	3706	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	0	4	0	2	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTTGAAACTTTTTTC	-18	True	NA	NA	False	AATAAA	-20	NA	8209221	8236270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_155612_11	chr6	+	4079	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	-19	-350	-19	350	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGTTCCATTTTG	NA	False	NA	NA	False	NA	NA	NA	8209202	8236624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_155614_22	chr6	+	2090	4	FSM	ENSMUSG00000089862.9	ENSMUST00000159433.8	2025	4	-61	-4	-13	0	multi-exon	FALSE	canonical	2	17	junction_2	5.43650214343336	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCTTTCATTGCATTA	-4	True	NA	NA	False	AATAAA	-26	NA	8259368	8428764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970
Isoform_155618_26	chr6	+	3311	16	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-34	-396	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	26.8104457255004	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTTTATTTTTTGTTTG	-15	True	NA	18	True	AATAAA	-24	NA	11907848	12007616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
Isoform_155619_6	chr6	+	3404	16	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-55	-399	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	26.8104457255004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGAGTTTATTTTTTGT	-20	True	NA	15	True	AATAAA	-21	NA	11907752	12007613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
Isoform_155620_10	chr6	+	3115	17	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	34	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_16	37.5349836818934	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGTATTGTATGATTT	-22	True	NA	NA	False	AATAAA	-16	NA	11907841	12008011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
Isoform_155621_5	chr6	+	3197	17	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-54	-7	combination_of_known_junctions	FALSE	canonical	3	33	junction_16	37.5349836818934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACATATTTGTATTGTA	-19	True	NA	NA	False	AATAAA	-10	NA	11907753	12008005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
Isoform_155623_61	chr6	+	3119	18	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-34	-1	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	28.9182118357714	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTATTTGAAATTCAT	-15	True	NA	4	True	AATAAA	-15	NA	11907848	12081196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
Isoform_155627_10	chr6	+	3568	16	FSM	ENSMUSG00000029629.18	ENSMUST00000090632.11	3985	16	-51	468	-17	-400	multi-exon	FALSE	canonical	3	71	junction_1	26.0421879947818	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATAGAGTTTATTTTTTG	NA	False	NA	14	True	AATAAA	-20	NA	11925862	12007612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
Isoform_155630_5	chr6	+	3325	17	FSM	ENSMUSG00000029629.18	ENSMUST00000115510.8	3353	17	26	2	-8	-2	multi-exon	FALSE	canonical	3	33	junction_16	37.0717210282986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGTATTGTATGATT	0	True	NA	NA	False	AATAAA	-15	NA	11925905	12008010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
Isoform_155631_28	chr6	+	3336	18	FSM	ENSMUSG00000029629.18	ENSMUST00000115511.9	3336	18	-8	8	-7	-1	multi-exon	FALSE	canonical	3	71	junction_1	28.335117658721	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTATTTGAAATTCAT	1	True	NA	4	True	AATAAA	-15	NA	11925906	12081196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
Isoform_155633_20	chr6	+	3370	18	FSM	ENSMUSG00000029629.18	ENSMUST00000115511.9	3336	18	-41	7	-6	0	multi-exon	FALSE	canonical	3	71	junction_1	28.335117658721	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTATTTGAAATTCATA	-32	True	NA	5	True	AATAAA	-16	NA	11925873	12081197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
Isoform_155635_91	chr6	+	6034	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-37	5	-14	-5	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATTTGGGTCATCCTCT	-12	True	NA	13	True	AATAAA	-14	NA	13069800	13089263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
Isoform_155642_8	chr6	+	1523	3	FSM	ENSMUSG00000097616.8	ENSMUST00000181225.2	1499	3	-24	0	19	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTGTTATGGATGATAG	4	True	NA	NA	False	AATAAA	-22	NA	13871543	13896421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_13871627_13881271_13881381_13895090
Isoform_155645_7	chr6	+	3633	4	FSM	ENSMUSG00000041390.19	ENSMUST00000125326.8	3635	4	2	0	2	0	multi-exon	FALSE	canonical	3	76	junction_1	31.8433666561813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	21	True	NA	NA	False	NA	NA	NA	15720721	15773303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212
Isoform_155646_102	chr6	+	3409	5	FSM	ENSMUSG00000041390.19	ENSMUST00000101663.10	3431	5	24	-2	-18	2	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCTTTAAGATCTTTT	-17	True	NA	10	True	ATTAAA	-18	NA	15720683	15802166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
Isoform_155653_5	chr6	+	3380	5	NIC	ENSMUSG00000041390.19	novel	3435	5	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	70.0892288443809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTTAAGATCTTTTT	102	False	NA	11	True	ATTAAA	-19	NA	15721098	15802167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_15721364_15731582_15731745_15740986_15741110_15770212_15770492_15799616
Isoform_155654_5	chr6	+	3468	3	ISM	ENSMUSG00000041390.19	ENSMUST00000125326.8	3635	4	390	0	24	0	3prime_fragment	FALSE	canonical	3	115	junction_1	19.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-41	True	NA	NA	False	NA	NA	NA	15721109	15773303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_15721364_15740986_15741110_15770212
Isoform_155655_65	chr6	+	3235	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	-4	-1360	-4	-1	multi-exon	FALSE	canonical	3	115	junction_1	16.539514973407	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTTAAGATCTTTTT	85	False	NA	11	True	ATTAAA	-19	NA	15721081	15802167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
Isoform_155659_4	chr6	+	3352	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	-128	-1353	-128	-4	multi-exon	FALSE	canonical	3	115	junction_1	16.539514973407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGACTGTGCTTTAAGA	122	False	NA	4	True	ATTAAA	-12	NA	15720957	15802160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
Isoform_155660_134	chr6	+	2407	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	34	-1	-9	1	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTCTTTCTATGTCC	0	True	NA	NA	False	AATAAA	-16	NA	17065181	17105823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
Isoform_155663_7	chr6	+	6836	22	FSM	ENSMUSG00000009376.16	ENSMUST00000115443.8	6809	22	-37	10	-37	-10	multi-exon	TRUE	canonical	1	2	junction_15	4.2527835355745	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGAGTTGGCTGTA	-18	True	NA	NA	False	AATAAA	-17	NA	17463761	17573969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17464248_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17549030_17549172_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552_17563719_17571370_17571508_17571611
Isoform_155669_318	chr6	+	2265	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	47	225	-5	-225	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAGCATGTTGTTTAAT	-9	True	NA	5	True	AATAAA	-42	NA	17637028	17666746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_155670_468	chr6	+	2241	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	47	249	-5	-249	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTATAGATTTTTAAAAA	-9	True	NA	-19	True	AATAAA	-18	NA	17637028	17666722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_155671_446	chr6	+	2317	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	73	147	14	-147	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCTAATTTCCTCTT	17	True	NA	14	True	AATATA	-14	NA	17637054	17666824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_155672_89	chr6	+	1939	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	3	595	3	-595	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTTCTTTGTATATT	1220	False	NA	27	True	AGTAAA	-34	NA	17636984	17666376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_155673_142	chr6	+	2454	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	76	7	17	-7	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAATTTGGTAAGTTGT	20	False	NA	NA	False	AGTAAA	-12	NA	17637057	17666964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_155675_600	chr6	+	1869	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	73	595	14	-595	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTTCTTTGTATATT	17	True	NA	27	True	AGTAAA	-34	NA	17637054	17666376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_155678_59	chr6	+	2348	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	41	148	-11	-148	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCTAATTTCCTCT	-15	True	NA	13	True	AATATA	-13	NA	17637022	17666823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_155679_85	chr6	+	2268	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	20	249	20	-249	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTATAGATTTTTAAAAA	1237	False	NA	-19	True	AATAAA	-18	NA	17637001	17666722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_155697_15	chr6	+	2168	16	FSM	ENSMUSG00000029534.18	ENSMUST00000081635.13	2115	16	2	-55	2	1	multi-exon	FALSE	canonical	2	9	junction_7	7.93473376995095	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGTGTCGTCTTCTA	17	False	NA	NA	False	AATAAA	-24	NA	17694032	17943020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
Isoform_155698_17	chr6	+	2121	16	FSM	ENSMUSG00000029534.18	ENSMUST00000081635.13	2115	16	49	-55	49	1	multi-exon	FALSE	canonical	2	9	junction_7	7.93473376995095	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGTGTCGTCTTCTA	8	True	NA	NA	False	AATAAA	-24	NA	17694079	17943020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
Isoform_155699_24	chr6	+	2043	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	58	-55	58	1	multi-exon	FALSE	canonical	2	14	junction_6	6.64093674238255	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGTGTCGTCTTCTA	17	True	NA	NA	False	AATAAA	-24	NA	17694088	17943020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
Isoform_1557_16	chr10	-	2910	3	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	178	-1	intron_retention	FALSE	canonical	3	770	junction_2	7	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATGTGTGCAGGTTTT	NA	False	NA	-10	True	AATAAA	-44	NA	5755422	5749160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_5751243_5751868_5752533_5755258
Isoform_155700_4	chr6	+	2265	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	-165	-54	-80	0	multi-exon	FALSE	canonical	2	14	junction_6	6.64093674238255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGTGTCGTCTTCT	253	False	NA	NA	False	AATAAA	-23	NA	17693865	17943019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
Isoform_155701_9	chr6	+	2161	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	-57	-58	-19	-1	multi-exon	FALSE	canonical	2	14	junction_6	6.64093674238255	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCGTCTTCTATCT	-4	True	NA	NA	False	AATAAA	-27	NA	17693973	17943023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
Isoform_155705_515	chr6	+	757	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	50	0	-12	0	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	-21	True	NA	17	True	AATAAA	-17	NA	18848627	18854052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
Isoform_155706_32	chr6	+	795	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	12	0	12	0	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	-3	True	NA	17	True	AATAAA	-17	NA	18848589	18854052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
Isoform_155710_4	chr6	+	3817	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	-15	-2	-15	2	multi-exon	FALSE	canonical	3	104	junction_1	20.5043837280255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTGAGTGTTCGATAA	NA	False	NA	NA	False	NA	NA	NA	21949554	21976039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
Isoform_155712_22	chr6	+	2662	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	1	1137	1	-2	multi-exon	FALSE	canonical	3	104	junction_1	20.5043837280255	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	NA	False	NA	20	True	AATATA	-19	NA	21949570	21974900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
Isoform_155720_28	chr6	+	2450	11	ISM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	457	1137	8	-2	3prime_fragment	FALSE	canonical	3	141	junction_5	14.2562267097574	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	1	True	NA	20	True	AATATA	-19	NA	21950026	21974900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
Isoform_155723_9	chr6	+	3610	11	ISM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	434	0	-15	0	3prime_fragment	FALSE	canonical	3	141	junction_5	14.2562267097574	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGCTGAGTGTTCGAT	-22	True	NA	NA	False	NA	NA	NA	21950003	21976037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
Isoform_155725_1776	chr6	+	1145	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	-29	0	-29	0	multi-exon	TRUE	canonical	3	1725	junction_4	143.712769091685	1776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	1742	False	NA	17	True	AATAAA	-17	NA	28423529	28426601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
Isoform_155736_2733	chr6	+	3475	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	-4	11	-4	-11	multi-exon	FALSE	canonical	3	582	junction_3	55.1049865830108	2733	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	-11	True	NA	19	True	AATAAA	-20	NA	28480342	28888820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
Isoform_15575_143	chr11	-	2374	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	204.16338161025	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95873437	95853556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
Isoform_155770_91	chr6	+	926	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	52	4	52	-4	multi-exon	FALSE	canonical	3	124	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTTTGTCCTGTTGA	3	True	NA	10	True	AATAAA	-17	NA	29272676	29275441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29272810_29274648
Isoform_155772_958	chr6	+	3174	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	48	7	35	-4	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	1	True	NA	111	True	AATAAA	-15	NA	29348152	29376667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
Isoform_155773_723	chr6	+	3209	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	13	7	0	-4	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	-1	True	NA	111	True	AATAAA	-15	NA	29348117	29376667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
Isoform_155774_385	chr6	+	3209	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	0	-539	0	-4	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	-1	True	NA	111	True	AATAAA	-15	NA	29348117	29376667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
Isoform_155776_490	chr6	+	3174	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	35	-539	35	-4	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	1	True	NA	111	True	AATAAA	-15	NA	29348152	29376667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
Isoform_155795_8	chr6	+	2843	13	NIC	ENSMUSG00000029769.18	novel	3356	15	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.64049658629248	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGTGTGACTTTTTCT	19	True	NA	NA	False	ATTAAA	-20	NA	29402915	29426952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_29403025_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29417930_29418153_29426623
Isoform_155796_715	chr6	+	641	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	60	2	60	-2	multi-exon	FALSE	canonical	3	1924	junction_1	0	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGTACTGGTATGGATA	-15	True	NA	35	True	ATTAAA	-17	NA	29467776	29470509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29467974_29470065
Isoform_155797_467	chr6	+	673	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	28	2	28	-2	multi-exon	FALSE	canonical	3	1924	junction_1	0	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGTACTGGTATGGATA	-4	True	NA	35	True	ATTAAA	-17	NA	29467744	29470509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29467974_29470065
Isoform_1558_12	chr10	-	1417	7	FSM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	-3	1174	-3	151	multi-exon	FALSE	canonical	3	26	junction_4	9.49853789918334	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGACAGTTGTTTTAT	NA	False	NA	-4	True	TATAAA	-17	NA	5773913	5763060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
Isoform_155802_28	chr6	+	2117	9	FSM	ENSMUSG00000029771.13	ENSMUST00000004392.12	2189	9	72	0	-11	0	multi-exon	FALSE	canonical	3	5	junction_7	3.25720355519885	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGCCCATTTATTGAC	-12	True	NA	NA	False	AATAAA	-12	NA	29526695	29537318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29526774_29531124_29531331_29533950_29534141_29534533_29534593_29535039_29535074_29535251_29535510_29535723_29536117_29536202_29536322_29536538
Isoform_155803_51	chr6	+	2014	8	FSM	ENSMUSG00000001763.15	ENSMUST00000046750.14	1994	8	-22	2	-22	0	multi-exon	FALSE	canonical	3	27	junction_2	5.15474815790535	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTGTCCTACATCAA	10	False	NA	7	True	AATAAA	-16	NA	29694198	29718556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29694544_29709939_29709998_29710585_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
Isoform_155806_29	chr6	+	2022	8	FSM	ENSMUSG00000001763.15	ENSMUST00000115250.4	1977	8	-45	0	-33	0	multi-exon	FALSE	canonical	3	18	junction_2	7.38172039015075	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTGTCCTACATCAA	-1	True	NA	7	True	AATAAA	-16	NA	29694187	29718556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29694544_29709939_29709998_29710588_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
Isoform_155807_176	chr6	+	3822	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	-49	6	-49	-6	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATGCGTGTTTCTTTT	-4	True	NA	NA	False	NA	NA	NA	29735643	29761358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
Isoform_155808_64	chr6	+	3911	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	-138	6	53	-6	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATGCGTGTTTCTTTT	45	False	NA	NA	False	NA	NA	NA	29735554	29761358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
Isoform_155810_24	chr6	+	4009	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	-236	6	-45	-6	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATGCGTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	29735456	29761358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
Isoform_155814_5	chr6	+	1917	3	ISM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	23047	6	23047	-6	3prime_fragment	FALSE	canonical	3	85	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATGCGTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	29758739	29761358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_29759014_29759482_29759618_29759850
Isoform_155816_20	chr6	+	5131	17	FSM	ENSMUSG00000029772.18	ENSMUST00000115242.9	5152	17	20	1	14	0	multi-exon	FALSE	canonical	3	14	junction_1	29.2814334305887	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	3	True	NA	8	True	AATAAA	-16	NA	29768510	29912308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29768906_29863138_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
Isoform_155817_4	chr6	+	2079	17	FSM	ENSMUSG00000029772.18	ENSMUST00000115242.9	5152	17	-24	3097	-12	-1	multi-exon	FALSE	canonical	3	14	junction_1	29.2814334305887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTGGCCCAGAGTGTG	184	False	NA	NA	False	ATTAAA	-20	NA	29768466	29909212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29768906_29863138_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
Isoform_155819_208	chr6	+	5135	17	FSM	ENSMUSG00000029772.18	ENSMUST00000102995.9	5155	17	26	-6	8	0	multi-exon	FALSE	canonical	3	86	junction_2	15.2883738507403	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCCTGAGAATACCA	-3	True	NA	9	True	AATAAA	-17	NA	29768504	29912309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
Isoform_15582_1575	chr11	-	2810	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-3	705	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_5	125.171983727207	1575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95896769	95853556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
Isoform_155824_3	chr6	+	3111	18	FSM	ENSMUSG00000039629.15	ENSMUST00000137068.6	3098	18	-10	-3	-9	3	multi-exon	FALSE	canonical	3	10	junction_1	4.07116622894077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTTGTTTTCTTTT	2296	False	NA	NA	False	TATAAA	-12	NA	29917001	29945556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424
Isoform_155825_24	chr6	+	5359	21	FSM	ENSMUSG00000039629.15	ENSMUST00000046028.12	5370	21	2	9	2	-3	multi-exon	FALSE	canonical	3	5	junction_19	5.0386009963084	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGAAATCTGGTCTTTA	-3	True	NA	NA	False	AATAAA	-15	NA	29917013	29959671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29955430_29955636_29956656
Isoform_155827_3	chr6	+	930	2	FSM	ENSMUSG00000045709.12	ENSMUST00000141679.3	1003	2	69	4	-58	-4	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTCTGCTTAGCAGT	0	True	NA	NA	False	AATAAA	-13	NA	29985302	29993773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29985466_29993006
Isoform_155828_97	chr6	+	2283	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-1	-44	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	163.040383545509	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12	True	NA	NA	False	AATAAA	-15	NA	30048026	30140859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
Isoform_155829_83	chr6	+	2320	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	1	-43	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	163.040383545509	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-24	True	NA	NA	False	AATAAA	-16	NA	30047990	30140860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
Isoform_155831_52	chr6	+	1914	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	175.389309030574	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	12	True	NA	3	True	AATAAA	-19	NA	30048026	30144855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
Isoform_155832_45	chr6	+	3260	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-13	-57	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	176.881080578638	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGAGAAAAGTTTCCAAT	0	True	NA	12	True	ATTAAA	-24	NA	30048014	30153122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_155837_247	chr6	+	2248	12	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-1	-43	combination_of_known_junctions	FALSE	canonical	3	271	junction_11	90.9985923058862	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12	True	NA	NA	False	AATAAA	-16	NA	30048026	30140860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
Isoform_155840_90	chr6	+	1877	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115206.8	1879	12	-3	5	-1	0	multi-exon	FALSE	canonical	3	122	junction_11	119.561388499108	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATGTATGGTTTGGGC	12	True	NA	2	True	AATAAA	-18	NA	30048026	30144854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
Isoform_155842_21	chr6	+	3278	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	26	-9	-1	9	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTGTATGTGAT	12	True	NA	78	True	TATAAA	-21	NA	30048026	30153188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_155843_41	chr6	+	3210	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	26	59	-1	-59	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTTGAGAAAAGTTTCCA	12	True	NA	10	True	ATTAAA	-22	NA	30048026	30153120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_155844_41	chr6	+	3248	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	-12	59	-1	-59	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTTGAGAAAAGTTTCCA	-26	True	NA	10	True	ATTAAA	-22	NA	30047988	30153120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_155848_129	chr6	+	2281	13	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-1	-43	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	167.068411636272	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12	True	NA	NA	False	AATAAA	-16	NA	30048026	30140860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
Isoform_155851_38	chr6	+	1911	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	178.740889433715	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	12	True	NA	3	True	AATAAA	-19	NA	30048026	30144855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
Isoform_155854_87	chr6	+	2287	12	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-3	-44	combination_of_known_junctions	FALSE	canonical	3	218	junction_2	102.024061333144	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-31	True	NA	NA	False	AATAAA	-15	NA	30047983	30140859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
Isoform_155855_112	chr6	+	2243	12	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-1	-45	combination_of_known_junctions	FALSE	canonical	3	218	junction_2	102.024061333144	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	12	True	NA	NA	False	AATAAA	-14	NA	30048026	30140858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
Isoform_155856_31	chr6	+	1874	12	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	127.487870108467	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATGTATGGTTTGGGC	12	True	NA	2	True	AATAAA	-18	NA	30048026	30144854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
Isoform_155857_22	chr6	+	1918	12	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	127.487870108467	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	-31	True	NA	3	True	AATAAA	-19	NA	30047983	30144855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
Isoform_155858_54	chr6	+	3215	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115212.8	3584	12	40	329	-1	-51	multi-exon	FALSE	canonical	3	109	junction_11	130.142642658033	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTTTCCAATTCTTAT	12	True	NA	18	True	ATTAAA	-30	NA	30048026	30153128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_155860_18	chr6	+	3580	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115212.8	3584	12	0	4	0	-4	multi-exon	FALSE	canonical	3	109	junction_11	130.142642658033	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACAAAAAGTGCCCCTCTC	-28	True	NA	NA	False	AATAAA	-14	NA	30047986	30153453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_155866_41	chr6	+	2144	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	1	3756	1	582	multi-exon	FALSE	canonical	3	95	junction_2	43.3720624650147	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAACTTCCCTTGTGC	-20	True	NA	23	True	ATTAAA	-30	NA	30401895	30451422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
Isoform_155870_4	chr6	+	1766	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	-44	4179	-16	159	multi-exon	FALSE	canonical	3	95	junction_2	43.3720624650147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAATTGTTGCCTTTTTT	NA	False	NA	25	True	NA	NA	NA	30401850	30450999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
Isoform_155871_6	chr6	+	1617	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	-56	4340	-28	-2	multi-exon	TRUE	canonical	3	95	junction_2	43.3720624650147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTTTAGTTTATGGAC	NA	False	NA	4	True	AATACA	-18	NA	30401838	30450838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
Isoform_155872_37	chr6	+	5899	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	-4	6	-4	-6	multi-exon	FALSE	canonical	3	95	junction_2	43.3720624650147	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTCCAAGTTGCCATG	-25	True	NA	25	True	AATAAA	-12	NA	30401890	30455172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
Isoform_155877_30	chr6	+	1658	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	5	2288	5	159	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAATTGTTGCCTTTTTT	-44	True	NA	25	True	NA	NA	NA	30401871	30450999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
Isoform_155879_40	chr6	+	5808	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	29	-1886	1	-5	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTCCAAGTTGCCATGA	-20	True	NA	26	True	AATAAA	-13	NA	30401895	30455173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
Isoform_155882_4	chr6	+	1032	7	ISM	ENSMUSG00000071553.11	ENSMUST00000096066.5	1388	11	5415	3	355	-3	3prime_fragment	FALSE	canonical	2	2	junction_5	2.98142396999972	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGCTTCTGGTCATTT	2004	False	NA	NA	False	ATTAAA	-19	NA	30546995	30564472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_30547206_30549240_30549340_30550743_30550855_30551964_30552056_30554162_30554363_30557670_30557756_30564236
Isoform_155884_22	chr6	+	2658	13	FSM	ENSMUSG00000051855.16	ENSMUST00000124665.3	2665	13	0	7	0	-4	multi-exon	FALSE	canonical	1	1	junction_1	120.876888701779	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGATTCCGGCTTCCC	0	True	NA	9	True	AATAAA	-15	NA	30738051	30748457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30738335_30740238_30740343_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
Isoform_155885_954	chr6	+	2554	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	3	4	0	-4	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGATTCCGGCTTCCC	0	True	NA	9	True	AATAAA	-15	NA	30738051	30748457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
Isoform_155888_57	chr6	+	2597	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	-40	4	-40	-4	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGATTCCGGCTTCCC	NA	False	NA	9	True	AATAAA	-15	NA	30738008	30748457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
Isoform_155895_17	chr6	+	2477	19	Fusion	ENSMUSG00000025609.16_ENSMUSG00000086855.2	novel	888	6	NA	NA	14	1	multi-exon	FALSE	canonical	1	9	junction_1	207.041565576923	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTATATTTTTCTTTA	NA	False	NA	18	True	AATAAA	-26	NA	31349843	31484904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr6_+_31349909_31351616_31351696_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
Isoform_155898_27	chr6	+	2454	18	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	20	junction_5	167.370359891596	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTATATTTTTCTTTA	NA	False	NA	18	True	AATAAA	-26	NA	31375771	31484904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409870_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
Isoform_155901_1079	chr6	+	2438	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	114	8843	4	0	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATATTTTTCTTT	NA	False	NA	17	True	AATAAA	-25	NA	31375783	31484903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
Isoform_155902_72	chr6	+	6378	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	102	4915	1	3928	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATGTGTGTGCCATTT	NA	False	NA	NA	False	ATTAAA	-43	NA	31375771	31488831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
Isoform_155904_16	chr6	+	6762	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	114	4519	4	4324	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAGCACCAATTTTC	NA	False	NA	NA	False	NA	NA	NA	31375783	31489227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
Isoform_155907_7	chr6	+	2760	14	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	14	111243	14	576	5prime_fragment	FALSE	canonical	3	107	junction_11	16.0457924585014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTGCGAGCTGAGAAA	NA	False	NA	NA	False	NA	NA	NA	33226033	33839671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995
Isoform_155909_251	chr6	+	4766	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	55	3	4	-3	multi-exon	FALSE	canonical	3	107	junction_11	15.4671210608191	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCGTATGTTGTTTTT	NA	False	NA	17	True	ATTAAA	-19	NA	33226074	33950911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
Isoform_155912_40	chr6	+	4813	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	9	2	9	-2	multi-exon	FALSE	canonical	3	107	junction_11	15.4671210608191	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCGTATGTTGTTTTTC	NA	False	NA	18	True	ATTAAA	-20	NA	33226028	33950912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
Isoform_155931_4	chr6	+	3058	20	FSM	ENSMUSG00000056215.14	ENSMUST00000070189.10	3058	20	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	1.53806728381078	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTTTTCCAGACTAATTA	NA	False	NA	NA	False	AATAAA	-19	NA	34006382	34110969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_34006689_34013435_34013544_34016242_34016325_34020339_34020441_34025793_34025876_34033005_34033131_34039285_34039430_34047995_34048077_34049304_34049392_34050650_34050758_34055598_34055719_34063310_34063408_34067106_34067221_34069671_34069874_34072458_34072555_34093323_34093455_34104111_34104201_34106039_34106166_34108899_34109046_34110255
Isoform_155932_15	chr6	+	1336	10	FSM	ENSMUSG00000029762.7	ENSMUST00000038406.7	1358	10	14	8	14	-8	multi-exon	FALSE	canonical	2	5	junction_2	1.94999208608714	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACACGTTCTGAAGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	34331067	34345390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
Isoform_155933_17	chr6	+	1334	10	FSM	ENSMUSG00000061758.14	ENSMUST00000038383.14	1371	10	36	1	5	-1	multi-exon	TRUE	canonical	3	14	junction_8	4.10960933531265	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTCAACTGTCAGAA	3042	False	NA	3	True	AATAAA	-17	NA	34361188	34373884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_34361343_34364606_34364775_34365710_34365828_34366989_34367068_34368951_34369075_34369323_34369431_34369849_34369932_34370992_34371077_34371661_34371745_34373546
Isoform_155934_5	chr6	+	1915	2	FSM	ENSMUSG00000038871.6	ENSMUST00000135743.2	1861	2	-54	0	-54	0	multi-exon	FALSE	canonical	3	97	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATTGACAGACTATAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	34453236	34466018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_34453358_34464224
Isoform_155935_64	chr6	+	1635	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	98	487	-51	-487	multi-exon	FALSE	canonical	3	82	junction_2	7.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGCGCAAGGTGCCTCGA	NA	False	NA	14	True	AATAAA	-19	NA	34453239	34482061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_34453358_34464224_34464886_34481205
Isoform_155942_9	chr6	+	1630	3	ISM	ENSMUSG00000029761.17	ENSMUST00000031775.13	2142	13	-147	26804	-3	4682	5prime_fragment	FALSE	canonical	3	208	junction_2	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATGAATTA	1302	False	NA	NA	False	AAGAAA	-34	NA	34686421	34723825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_34686633_34718723_34718871_34722553
Isoform_155948_186	chr6	+	3987	12	FSM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	50	4	2	1	multi-exon	FALSE	canonical	3	149	junction_3	28.0630930241598	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCTCGTGCATTC	1307	False	NA	28	True	AATAAA	-16	NA	34686426	34752404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
Isoform_155951_130	chr6	+	4034	12	FSM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	3	4	3	1	multi-exon	FALSE	canonical	3	149	junction_3	28.0630930241598	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCTCGTGCATTC	1260	False	NA	28	True	AATAAA	-16	NA	34686379	34752404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
Isoform_155957_3	chr6	+	1894	4	FSM	ENSMUSG00000038836.16	ENSMUST00000115014.8	805	4	-452	-637	-5	562	multi-exon	FALSE	canonical	2	5	junction_3	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGCAATCTGTACTTA	1664	False	NA	NA	False	AATAAA	-20	NA	34757371	34763216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_34757995_34759034_34759154_34760504_34760566_34762125
Isoform_155958_7	chr6	+	1404	9	NIC	ENSMUSG00000029848.12	novel	1455	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	25.8202924073295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGTGTCCTGGCA	NA	False	NA	11	True	TATAAA	-16	NA	34897882	34916277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_34897990_34904653_34904789_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
Isoform_155960_27	chr6	+	1513	9	FSM	ENSMUSG00000029848.12	ENSMUST00000114999.8	1455	9	-57	-1	-57	1	multi-exon	FALSE	canonical	1	14	junction_3	19.2272592950738	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTCCTGGCAG	NA	False	NA	12	True	TATAAA	-17	NA	34897837	34916278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_34897990_34904653_34904852_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
Isoform_155962_34	chr6	+	2406	15	FSM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	4	-1	4	1	multi-exon	FALSE	canonical	2	193	junction_5	41.0390555645796	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTATTCCTTCTTGGA	NA	False	NA	NA	False	AATAAA	-16	NA	35154554	35182589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
Isoform_155964_408	chr6	+	6217	43	FSM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	190	5	4	1	multi-exon	FALSE	canonical	2	193	junction_5	62.1117418909309	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACAAATGTGTGGT	NA	False	NA	NA	False	AATAAA	-11	NA	35154554	35224526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
Isoform_155965_17	chr6	+	6414	43	FSM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	-8	6	1	0	multi-exon	FALSE	canonical	2	193	junction_5	62.1117418909309	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154356	35224525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
Isoform_1560_10	chr10	-	1280	7	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	7	151	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	8.85061203156784	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGACAGTTGTTTTAT	NA	False	NA	-4	True	TATAAA	-17	NA	5773903	5763060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768927_5768985_5770024_5770105_5773525
Isoform_156009_26	chr6	+	2475	4	NNC	ENSMUSG00000073155.13	novel	690	4	NA	NA	19	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	477.609556948863	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTCTGCCACACTA	NA	False	NA	12	True	NA	NA	NA	35229607	35240428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_35229718_35237344_35237399_35238093_35239029_35239052
Isoform_156010_696	chr6	+	608	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	56	1857	-6	2	multi-exon	FALSE	canonical	3	978	junction_2	33.5	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGGTGAATTAATCCA	NA	False	NA	15	True	ATTAAA	-19	NA	35229644	35238574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_35229718_35237344_35237399_35238093
Isoform_156011_57	chr6	+	976	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	57	1488	-5	-14	multi-exon	FALSE	canonical	3	978	junction_2	33.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTGTGGTGCAAATGT	NA	False	NA	NA	False	ATTAAA	-40	NA	35229645	35238943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_35229718_35237344_35237399_35238093
Isoform_156018_993	chr6	+	3928	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	4	8	4	-8	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTTTGGTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	37847749	37943223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_156019_30	chr6	+	6079	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	10	-2149	10	2149	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTGCTATCCTGACATA	NA	False	NA	NA	False	ATTAAA	-30	NA	37847755	37945380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_156025_25	chr6	+	4005	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	-73	8	-73	-8	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTTTGGTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	37847672	37943223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_156028_208	chr6	+	4030	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	4	8	4	-8	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTTTGGTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	37847749	37943223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_156031_18	chr6	+	4084	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	-42	0	-42	0	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847703	37943231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_156032_18	chr6	+	7469	18	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	5	0	intron_retention	FALSE	canonical	3	444	junction_8	56.0890912671043	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847750	37943231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_156052_3	chr6	+	536	3	FSM	ENSMUSG00000029829.5	ENSMUST00000031851.5	631	3	93	2	93	-2	multi-exon	FALSE	canonical	2	4	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCTGGCTCTTTTATT	NA	False	NA	NA	False	TTTAAA	-16	NA	38086282	38092742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38086491_38091542_38091612_38092483
Isoform_156053_74	chr6	+	4156	18	FSM	ENSMUSG00000056832.15	ENSMUST00000162554.8	4195	18	34	5	-22	-5	multi-exon	FALSE	canonical	3	24	junction_11	3.0576920984393	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTGTGTTCATGTTT	3519	False	NA	NA	False	ATTAAA	-18	NA	38358437	38404577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
Isoform_156054_21	chr6	+	4521	18	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	13.1069595079581	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	15	True	NA	NA	NA	38410871	38479511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
Isoform_156055_22	chr6	+	4494	17	FSM	ENSMUSG00000038538.18	ENSMUST00000160583.8	14644	17	-13	10163	-13	21	multi-exon	FALSE	canonical	3	23	junction_13	12.8900094550004	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAGAAAAGAAAAGAAAA	NA	False	NA	39	True	NA	NA	NA	38410871	38479535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475622_38475855_38476121_38476212_38479172
Isoform_156056_11	chr6	+	4611	18	NIC	ENSMUSG00000038538.18	novel	4243	17	NA	NA	-73	21	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	15.2512975226558	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAGAAAAGAAAAGAAAA	NA	False	NA	39	True	NA	NA	NA	38410811	38479535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440985_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
Isoform_156059_194	chr6	+	449	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	29	1	29	0	multi-exon	FALSE	canonical	3	741	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTGGTTTTTGTGTGC	9958	False	NA	8	True	ATTAAA	-16	NA	38511786	38516383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38511946_38516093
Isoform_156062_3	chr6	+	3393	2	FSM	ENSMUSG00000029823.17	ENSMUST00000160922.5	3448	2	-75	130	-9	1	multi-exon	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATGTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	38528390	38534854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38528844_38531914
Isoform_156064_4	chr6	+	1879	10	ISM	ENSMUSG00000029823.17	ENSMUST00000161227.8	2405	11	-345	5555	-7	-1168	5prime_fragment	FALSE	canonical	2	8	junction_2	39.0924829375447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGCCTGTTTTCCAC	NA	False	NA	2	True	NA	NA	NA	38528392	38580807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_38528844_38531914_38531999_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
Isoform_156065_3	chr6	+	697	4	NNC	ENSMUSG00000029823.17	novel	2846	3	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.0693842672377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATGTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	38528379	38534854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_38528844_38531914_38531999_38534234_38534316_38534786
Isoform_156066_9	chr6	+	1177	2	NIC	ENSMUSG00000029823.17	novel	382	5	NA	NA	-8	6	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTGTAACT	NA	False	NA	39	True	NA	NA	NA	38528391	38546506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_38528844_38545781
Isoform_156067_11	chr6	+	1822	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-28	5592	-28	-1162	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTTTTCCACATTTTG	NA	False	NA	8	True	NA	NA	NA	38528371	38580813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
Isoform_156069_9	chr6	+	3361	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-20	4045	-20	385	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGCCCTTGCTGTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	38528379	38582360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
Isoform_156070_9	chr6	+	5077	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-7	2316	-7	787	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGTGTTGAAAAGTAT	NA	False	NA	8	True	AATAAA	-23	NA	38528392	38584089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
Isoform_156074_9	chr6	+	2661	10	FSM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-8	49	-8	-6	multi-exon	FALSE	canonical	3	38	junction_9	33.3603594142346	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACTGAAACAGCAGTT	NA	False	NA	13	True	AATAAA	-15	NA	38528391	38586356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
Isoform_156076_21	chr6	+	1772	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	-7	2488	-7	-1161	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTTCCACATTTTGG	NA	False	NA	9	True	NA	NA	NA	38528392	38580814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
Isoform_156080_12	chr6	+	5047	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	-7	-787	-7	787	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGTGTTGAAAAGTAT	NA	False	NA	8	True	AATAAA	-23	NA	38528392	38584089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
Isoform_156081_3	chr6	+	5088	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	7	-842	7	842	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGTTTCTGTTTTGTT	NA	False	NA	63	True	AATATA	-14	NA	38528406	38584144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
Isoform_156082_7	chr6	+	1053	3	ISM	ENSMUSG00000079598.5	ENSMUST00000114874.5	1431	5	13675	8	12863	-8	3prime_fragment	FALSE	canonical	2	3	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGAGTCTGCTGGCAT	NA	False	NA	NA	False	AATAAA	-12	NA	38653676	38657792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_38653899_38654443_38654545_38657062
Isoform_156083_102	chr6	+	2496	8	FSM	ENSMUSG00000046947.13	ENSMUST00000140364.8	3542	8	47	999	-39	18	multi-exon	FALSE	canonical	3	19	junction_2	10.7437689582647	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTGTGTGTTGCATC	NA	False	NA	36	True	AATACA	-36	NA	39550853	39564704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560744_39560997_39562660_39562790_39563774_39563829_39564302
Isoform_156084_14	chr6	+	2477	8	FSM	ENSMUSG00000046947.13	ENSMUST00000140364.8	3542	8	1	1064	1	-47	multi-exon	FALSE	canonical	3	19	junction_2	10.7437689582647	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTCTGTAAAAGACG	NA	False	NA	-29	True	CATAAA	-43	NA	39550807	39564639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560744_39560997_39562660_39562790_39563774_39563829_39564302
Isoform_156086_492	chr6	+	417	4	FSM	ENSMUSG00000002416.14	ENSMUST00000135671.8	4371	4	29	3925	15	-14	multi-exon	FALSE	canonical	3	748	junction_3	834.773555456142	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGAGGAACTGAGTTAT	NA	False	NA	16	True	ATTAAA	-25	NA	39569536	39576391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_39569647_39573384_39573530_39575199_39575296_39576325
Isoform_156087_476	chr6	+	421	4	FSM	ENSMUSG00000002416.14	ENSMUST00000119379.2	455	4	20	14	15	-14	multi-exon	FALSE	canonical	3	713	junction_3	851.269770532363	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGAGGAACTGAGTTAT	NA	False	NA	16	True	ATTAAA	-25	NA	39569536	39576391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_39569647_39573384_39573530_39575199_39575300_39576325
Isoform_156091_10	chr6	+	512	4	NIC	ENSMUSG00000002416.14	novel	491	4	NA	NA	15	-14	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	1061.02413837868	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGAGGAACTGAGTTAT	NA	False	NA	16	True	ATTAAA	-25	NA	39569536	39576391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_39569738_39573384_39573530_39575199_39575300_39576325
Isoform_156097_73	chr6	+	2281	17	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-7	combination_of_known_splicesites	FALSE	canonical	3	34	junction_5	181.494049058778	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302428	40373689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_1561_3	chr10	-	864	5	FSM	ENSMUSG00000019775.18	ENSMUST00000131996.8	8107	5	28	7215	8	218	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGAAATTGAGTTCCT	NA	False	NA	NA	False	AATAAA	-13	NA	5872358	5782877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_5783142_5791271_5791507_5792535_5792626_5812518_5812663_5872227
Isoform_156100_990	chr6	+	2202	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	323	6	8	-6	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATCCAGTGTAATCTA	NA	False	NA	2	True	NA	NA	NA	40302428	40373690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_156101_27	chr6	+	2273	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	252	6	-61	-6	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATCCAGTGTAATCTA	NA	False	NA	2	True	NA	NA	NA	40302357	40373690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_156102_69	chr6	+	2276	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	323	-68	8	68	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAATTATTTTTTT	NA	False	NA	76	True	NA	NA	NA	40302428	40373764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_156107_27	chr6	+	3008	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	323	-800	8	800	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGCAGAGACCTGGCTG	NA	False	NA	NA	False	NA	NA	NA	40302428	40374496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_156120_659	chr6	+	622	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	69	3707	6	1	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGGTTATATTTTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	40448354	40457927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
Isoform_156123_227	chr6	+	953	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	-20	0	2	0	multi-exon	FALSE	canonical	3	282	junction_1	935.620961358462	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGGTTATATTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	40448388	40457926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
Isoform_156126_207	chr6	+	1198	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	-13	3	2	0	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGGTTATATTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	40448388	40457926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
Isoform_156132_35	chr6	+	3738	18	FSM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	17	7	17	-5	multi-exon	FALSE	canonical	2	8	junction_2	4.47522978861417	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGAGGTGTGTCCAT	345	False	NA	6	True	ATTAAA	-18	NA	41582432	41597436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
Isoform_156133_3	chr6	+	3941	17	NIC	ENSMUSG00000029869.8	novel	3762	18	NA	NA	7	-4	intron_retention	TRUE	canonical	2	8	junction_2	4.60298815988049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGAGGTGTGTCCATG	335	False	NA	7	True	ATTAAA	-19	NA	41582422	41597437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
Isoform_156134_22	chr6	+	916	8	FSM	ENSMUSG00000029864.8	ENSMUST00000031897.8	930	8	19	-5	19	-1	multi-exon	FALSE	canonical	3	11	junction_5	4.42165358301205	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTTCTGGGTCTGTAT	NA	False	NA	7	True	AATAAA	-18	NA	42222887	42227380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_42223028_42223483_42223566_42223744_42223874_42224417_42224519_42224667_42224704_42226312_42226430_42226772_42226867_42227163
Isoform_156136_5	chr6	+	3576	12	NIC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	42.7493173305891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	42241989	42259441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
Isoform_156137_9	chr6	+	3537	11	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	35.1573605380154	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241968	42259442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
Isoform_156139_12	chr6	+	3567	12	FSM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	-112	-2016	23	0	multi-exon	FALSE	canonical	3	27	junction_8	34.7888554397801	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241941	42259442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
Isoform_156140_17	chr6	+	3526	12	FSM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	-71	-2016	-7	0	multi-exon	FALSE	canonical	3	27	junction_8	34.7888554397801	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241982	42259442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
Isoform_156141_10	chr6	+	3632	10	ISM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	44	5	-27	-5	intron_retention	FALSE	canonical	3	71	junction_8	18.6309181499762	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTTTGTGCCTGGTGT	NA	False	NA	8	True	AATAAA	-15	NA	42241962	42259437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017
Isoform_156142_197	chr6	+	3460	11	FSM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	66	3	-5	-3	multi-exon	FALSE	canonical	3	71	junction_8	18.1	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGTGCCTGGTGTTT	NA	False	NA	10	True	AATAAA	-17	NA	42241984	42259439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
Isoform_156143_27	chr6	+	3504	11	FSM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	24	1	24	-1	multi-exon	FALSE	canonical	3	71	junction_8	18.1	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	42241942	42259441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
Isoform_156146_10	chr6	+	2237	10	FSM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	201	167	-4	3	multi-exon	FALSE	canonical	3	26	junction_4	4.64545443563708	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTAGTACTTGATTTTT	NA	False	NA	6	True	TATAAA	-16	NA	42326962	42335329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
Isoform_156147_6	chr6	+	2149	9	FSM	ENSMUSG00000029860.17	ENSMUST00000070635.13	2301	9	154	-2	-10	2	multi-exon	FALSE	canonical	2	6	junction_3	9.78439446261239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTAGTACTTGATTTT	NA	False	NA	5	True	TATAAA	-15	NA	42326956	42335328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
Isoform_156151_13	chr6	+	1392	4	FSM	ENSMUSG00000039419.18	ENSMUST00000199100.5	6279	4	-9	4896	-9	-257	multi-exon	FALSE	canonical	3	21	junction_1	8.01387685344754	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGTTTTTTATTGA	NA	False	NA	3	True	AATAAA	-16	NA	47221311	47276247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47221484_47248073_47248314_47273652_47273734_47275348
Isoform_156153_8	chr6	+	1643	4	FSM	ENSMUSG00000039419.18	ENSMUST00000199100.5	6279	4	-6	4642	-6	-3	multi-exon	FALSE	canonical	3	21	junction_1	8.01387685344754	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTAGTGTGCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	47221314	47276501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47221484_47248073_47248314_47273652_47273734_47275348
Isoform_156158_344	chr6	+	3075	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-17	16	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGTTTTGTTTTAAGT	NA	False	NA	24	True	AATAAA	-29	NA	47430820	47503008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_156159_82	chr6	+	3098	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-47	9	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGCATTTGGTTTTGT	NA	False	NA	17	True	AATAAA	-22	NA	47430790	47503001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_156160_91	chr6	+	3110	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	17	4	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCCCATTGTCTTCCTG	NA	False	NA	23	True	AATAAA	-24	NA	47430854	47503077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_156161_29	chr6	+	3175	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-47	5	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCATTGTCTTCCTGA	NA	False	NA	24	True	AATAAA	-25	NA	47430790	47503078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_156166_135	chr6	+	3132	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	28	1	28	-1	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTATATTCCCATTGTCT	NA	False	NA	18	True	AATAAA	-19	NA	47431281	47503072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_156167_186	chr6	+	3104	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	-13	70	-13	11	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCATTTGGTTTTGTTT	NA	False	NA	19	True	AATAAA	-24	NA	47431240	47503003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_156168_492	chr6	+	3028	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	64	69	-4	12	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATTTGGTTTTGTTTT	NA	False	NA	20	True	AATAAA	-25	NA	47431317	47503004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_156169_22	chr6	+	3172	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	-85	74	-85	7	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTTGCATTTGGTTTT	NA	False	NA	15	True	AATAAA	-20	NA	47431168	47502999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_156171_60	chr6	+	3165	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	-5	1	-5	-1	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTATATTCCCATTGTCT	NA	False	NA	18	True	AATAAA	-19	NA	47431248	47503072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_156185_15	chr6	+	2277	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	5	624	5	-624	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAACTAGAGACATGCTTG	NA	False	NA	5	True	CATAAA	-18	NA	47812602	47843998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
Isoform_156187_3	chr6	+	4800	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	171	-2065	140	2065	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAATCTCTTTGCCATC	NA	False	NA	NA	False	AATAAA	-12	NA	47812768	47846687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
Isoform_156188_3	chr6	+	2583	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	142	181	111	-181	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGACTTTGATAGCTTAT	NA	False	NA	NA	False	AATACA	-27	NA	47812739	47844441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
Isoform_156189_28	chr6	+	3696	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	361	1516	-91	-1516	multi-exon	TRUE	canonical	3	24	junction_5	6.34388666033558	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATGTTCCCAAAGCT	NA	False	NA	17	True	AATAAA	-17	NA	47854498	47883903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
Isoform_15619_2668	chr11	-	2903	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	32	1062	32	-1062	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	2668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGAAGCGCCTGTGGGT	5499	False	NA	-6	True	AATAAA	-16	NA	95956182	95939319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
Isoform_156190_89	chr6	+	3598	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	459	1516	7	-1516	multi-exon	FALSE	canonical	3	24	junction_5	6.34388666033558	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATGTTCCCAAAGCT	NA	False	NA	17	True	AATAAA	-17	NA	47854596	47883903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
Isoform_156191_39	chr6	+	3671	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	386	1516	-66	-1516	multi-exon	FALSE	canonical	3	24	junction_5	6.34388666033558	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATGTTCCCAAAGCT	NA	False	NA	17	True	AATAAA	-17	NA	47854523	47883903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
Isoform_156193_3	chr6	+	4288	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	457	828	5	-828	multi-exon	FALSE	canonical	3	24	junction_5	6.34388666033558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACC	NA	False	NA	NA	False	TTTAAA	-32	NA	47854594	47884591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
Isoform_156194_7	chr6	+	4219	4	ISM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	150	12	150	-12	intron_retention	FALSE	canonical	3	164	junction_3	6.34209919681348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCAAAATGTTCACA	NA	False	NA	12	True	AATAAA	-19	NA	47897559	47909561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983
Isoform_156196_298	chr6	+	2640	5	FSM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	149	12	149	-12	multi-exon	FALSE	canonical	3	116	junction_4	25.1445819213603	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCAAAATGTTCACA	NA	False	NA	12	True	AATAAA	-19	NA	47897558	47909561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907644
Isoform_156198_58	chr6	+	2655	5	NNC	ENSMUSG00000052763.8	novel	2801	5	NA	NA	132	-11	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	63.3141966702571	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATGTTCACAG	NA	False	NA	13	True	AATAAA	-20	NA	47897541	47909562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907647
Isoform_156200_114	chr6	+	2718	5	FSM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	35	8	-20	-5	multi-exon	FALSE	canonical	3	26	junction_2	2.77263412660235	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAAGTCCCTGTCTTG	9748	False	NA	10	True	AATAAA	-15	NA	47930358	47942226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255
Isoform_156202_5	chr6	+	2819	5	FSM	ENSMUSG00000045466.19	ENSMUST00000140719.2	2823	5	-8	12	-6	-12	multi-exon	FALSE	canonical	2	2	junction_3	12.1937483982572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGACGTGTAAAGTCCC	9762	False	NA	3	True	AATAAA	-8	NA	47930372	47942219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_47930517_47932750_47933105_47934409_47934659_47939458_47939567_47940255
Isoform_156203_21	chr6	+	3977	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	73	2645	1	1	multi-exon	FALSE	canonical	3	25	junction_1	12.8178616724737	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGGCCATTGGCTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	48372592	48393834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
Isoform_156204_6	chr6	+	4067	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	-18	2646	-18	0	multi-exon	FALSE	canonical	3	25	junction_1	12.8178616724737	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAGGCCATTGGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	48372501	48393833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
Isoform_156207_46	chr6	+	3923	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114572.9	4323	18	-166	566	2	1	multi-exon	FALSE	canonical	3	26	junction_1	12.6595014032365	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGGCCATTGGCTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	48372633	48393834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
Isoform_15621_341	chr11	-	2944	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	-5	1058	-5	-1058	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCGCCTGTGGGTGTGG	5462	False	NA	-2	True	AATAAA	-20	NA	95956219	95939315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
Isoform_156210_8	chr6	+	3852	17	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	16.9036793332103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAGGCCATTGGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	48372576	48393833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_48372822_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
Isoform_156211_3	chr6	+	3757	17	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	17.3132896931808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCATTGGCTTCTGTGG	NA	False	NA	NA	False	ATTAAA	-19	NA	48372631	48393838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_48372822_48380356_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
Isoform_156212_88	chr6	+	1732	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	55	2	5	-2	multi-exon	FALSE	canonical	3	94	junction_1	1.24721912892465	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTGGCCTCTGCTCAG	6259	False	NA	25	True	AATAAA	-33	NA	48514603	48518733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
Isoform_156213_6	chr6	+	1809	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	-29	9	-29	-9	multi-exon	FALSE	canonical	3	94	junction_1	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAAATGTCTGGCCTC	6175	False	NA	18	True	AATAAA	-26	NA	48514519	48518726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
Isoform_156216_14	chr6	+	2891	3	FSM	ENSMUSG00000073096.12	ENSMUST00000114545.8	2913	3	22	0	7	0	multi-exon	FALSE	canonical	3	10	junction_1	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCTTGGTCATGGTAT	8301	False	NA	14	True	NA	NA	NA	48531751	48547656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48531917_48533888_48534029_48545070
Isoform_156218_8	chr6	+	2770	2	FSM	ENSMUSG00000073096.12	ENSMUST00000153222.2	374	2	0	-2396	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCTTGGTCATGGTAT	8282	False	NA	14	True	NA	NA	NA	48531732	48547656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48531917_48545070
Isoform_156219_58	chr6	+	3117	3	FSM	ENSMUSG00000052751.17	ENSMUST00000118229.2	3138	3	20	1	11	0	multi-exon	FALSE	canonical	3	41	junction_2	5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	20	True	AATAAA	-18	NA	48570844	48576015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48570987_48571724_48571911_48573226
Isoform_156222_47	chr6	+	3142	3	NNC	ENSMUSG00000052751.17	novel	3138	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	12.5	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	False	NA	21	True	AATAAA	-19	NA	48570817	48576016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_48570987_48571724_48571911_48573229
Isoform_156223_27	chr6	+	3015	3	FSM	ENSMUSG00000052751.17	ENSMUST00000135151.3	3057	3	42	0	2	0	multi-exon	FALSE	canonical	3	22	junction_1	9.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	20	True	AATAAA	-18	NA	48570875	48576015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48570987_48571795_48571911_48573226
Isoform_156225_23	chr6	+	3041	3	NNC	ENSMUSG00000052751.17	novel	3138	3	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	2	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	False	NA	21	True	AATAAA	-19	NA	48570847	48576016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_48570987_48571795_48571911_48573229
Isoform_156226_18	chr6	+	2925	2	FSM	ENSMUSG00000052751.17	ENSMUST00000163452.7	2959	2	33	1	16	-1	multi-exon	FALSE	canonical	3	7	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGCTGGTGGTGTTCTT	NA	False	NA	19	True	AATAAA	-17	NA	48570849	48576014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48570987_48573226
Isoform_156227_5	chr6	+	2913	2	NNC	ENSMUSG00000052751.17	novel	2959	2	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTAGTGGCTGGTGGTGTT	NA	False	NA	16	True	AATAAA	-14	NA	48570855	48576011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_48570987_48573229
Isoform_156229_39	chr6	+	2520	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	-56	1679	-56	-1679	multi-exon	FALSE	canonical	3	52	junction_2	4.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTCACTGTTCTTTC	NA	False	NA	8	True	AATGAA	-16	NA	48578940	48598482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48579055_48590111_48590194_48596158
Isoform_156230_164	chr6	+	2492	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	-28	1679	-28	-1679	multi-exon	FALSE	canonical	3	52	junction_2	4.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTCACTGTTCTTTC	NA	False	NA	8	True	AATGAA	-16	NA	48578968	48598482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48579055_48590111_48590194_48596158
Isoform_156232_4	chr6	+	2589	4	NNC	ENSMUSG00000007216.7	novel	4143	3	NA	NA	-24	-1679	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.4236347876812	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTCACTGTTCTTTC	NA	False	NA	8	True	AATGAA	-16	NA	48578972	48598482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_48579055_48587584_48587686_48590111_48590194_48596158
Isoform_156233_4	chr6	+	1747	4	FSM	ENSMUSG00000053297.15	ENSMUST00000095938.10	3517	4	311	1459	-148	-1459	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTTTTAGTCCATCCAA	1986	False	NA	NA	False	AATAAA	-16	NA	48604008	48609160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48604048_48606061_48606939_48607105_48607250_48608473
Isoform_156234_35	chr6	+	1363	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	21	0	21	0	multi-exon	FALSE	canonical	3	46	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATGATTGACTTCTTG	1310	False	NA	17	True	NA	NA	NA	48653083	48655633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48653189_48654375
Isoform_156236_3	chr6	+	1780	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	21	-417	21	2	multi-exon	FALSE	canonical	3	46	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGGCATATATGTGTG	1310	False	NA	NA	False	AATAAA	-22	NA	48653083	48656050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48653189_48654375
Isoform_156237_4	chr6	+	1070	7	FSM	ENSMUSG00000023367.15	ENSMUST00000101426.11	1540	7	-39	509	-39	-1	multi-exon	FALSE	canonical	1	1	junction_2	2.11476292340825	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGGTCCTTGCTTTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	48818406	48822294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48818524_48819137_48819336_48819522_48819634_48820718_48820776_48820894_48821114_48821601_48821713_48822037
Isoform_156238_4	chr6	+	1150	4	NNC	ENSMUSG00000029816.11	novel	3701	11	NA	NA	-2	-2228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.4125300177453	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATTATTAGTGAAGTGT	NA	False	NA	NA	False	CATAAA	-14	NA	49013546	49023057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_49013683_49019700_49019770_49020948_49021075_49022238
Isoform_156239_137	chr6	+	2265	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	35	1401	-15	-1401	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTGTGTGATTATTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	49013583	49033715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
Isoform_156241_15	chr6	+	2380	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	-80	1401	-11	-1401	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTGTGTGATTATTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	49013468	49033715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
Isoform_156248_571	chr6	+	724	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	50	2045	-3	28	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCTTTGATATGACTG	345	False	NA	7	True	AATAAA	-16	NA	49050778	49061640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
Isoform_156251_9	chr6	+	2760	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	53	6	0	-6	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAATAATTTTGCTT	348	False	NA	NA	False	TATAAA	-17	NA	49050781	49063679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
Isoform_156253_39	chr6	+	557	3	FSM	ENSMUSG00000029815.13	ENSMUST00000114500.3	2587	3	-16	2046	-16	27	multi-exon	FALSE	canonical	3	89	junction_1	380.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTGATATGACT	332	False	NA	6	True	AATAAA	-15	NA	49050765	49061639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_49051038_49059778_49059861_49061436
Isoform_156255_35	chr6	+	2322	3	FSM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	30	-1	-3	1	multi-exon	FALSE	canonical	3	46	junction_2	7.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATTTTTGGTTTGG	NA	False	NA	16	True	AATAAA	-20	NA	49296237	49318517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_49296415_49310844_49311232_49316759
Isoform_156258_26	chr6	+	1372	7	FSM	ENSMUSG00000047115.16	ENSMUST00000060561.15	2730	7	93	1265	9	1	multi-exon	FALSE	canonical	3	30	junction_5	5.75663867972351	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACATAGGGTCAGA	NA	False	NA	NA	False	ATTAAA	-8	NA	49344765	49366208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362306_49362390_49365750
Isoform_156261_15	chr6	+	1397	7	NNC	ENSMUSG00000047115.16	novel	2730	7	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	11.0867789130417	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACATAGGGTCAGA	NA	False	NA	NA	False	ATTAAA	-8	NA	49344737	49366208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362309_49362390_49365750
Isoform_156265_63	chr6	+	3275	24	FSM	ENSMUSG00000023403.15	ENSMUST00000024171.14	3237	24	-36	-2	-36	2	multi-exon	FALSE	canonical	2	108	junction_8	52.5929548855327	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTCATATTCTTTGC	137	False	NA	NA	False	AATAAA	-24	NA	49372501	49446437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_156268_35	chr6	+	2734	22	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-36	-4	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	53.746739604748	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTGAAAATCATTCATAT	137	False	NA	NA	False	AATAAA	-17	NA	49372501	49446430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_156269_4	chr6	+	2594	21	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-9	5	combination_of_known_splicesites	FALSE	canonical	2	36	junction_19	67.3606710180354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	164	False	NA	NA	False	AATAAA	-27	NA	49372528	49446440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
Isoform_15627_46	chr11	-	3965	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	27	5	27	-5	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAACTTGGAATGAA	5494	False	NA	NA	False	AATAAA	-14	NA	95956187	95938262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
Isoform_156271_20	chr6	+	2475	20	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	54.5748107857386	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATCATTCATATTCTT	124	False	NA	NA	False	AATAAA	-21	NA	49372488	49446434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_156272_7	chr6	+	2341	19	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-36	1	combination_of_known_splicesites	FALSE	canonical	2	36	junction_17	69.6486996147429	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	137	False	NA	NA	False	AATAAA	-23	NA	49372501	49446436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
Isoform_156279_77	chr6	+	1924	13	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	-12	-47	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACAAGTCAGCCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	50087245	50175357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_156283_20	chr6	+	1977	13	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	-29	-48	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAACAAGTCAGCCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	50087191	50175356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_156290_724	chr6	+	1944	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	7	210	7	-47	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACAAGTCAGCCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	50087235	50175357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_156291_85	chr6	+	2715	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	11	-565	11	213	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACTTCAGTTTTGTTTT	NA	False	NA	10	True	TATAAA	-11	NA	50087239	50176132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_156294_169	chr6	+	2168	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	5	-12	5	1	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAGTTTTGATTTAG	NA	False	NA	20	True	CATAAA	-17	NA	50087233	50175579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_156295_20	chr6	+	2303	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-17	-125	-9	114	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGCTGTCATTCTTGT	NA	False	NA	NA	False	AATGAA	-16	NA	50087211	50175692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_1563_86	chr10	-	3414	13	FSM	ENSMUSG00000015202.14	ENSMUST00000015346.12	3447	13	34	-1	34	1	multi-exon	FALSE	canonical	3	41	junction_10	5.32812245438193	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGATTTTATGAATTT	NA	False	NA	-3	True	AATAAA	-12	NA	7162203	7069061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7110643_7110808_7161631
Isoform_156312_16	chr6	+	1758	11	NIC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	11	-44	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	329.176563564298	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTCAGCCTTCTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	50087239	50175360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_156325_5	chr6	+	1165	3	FSM	ENSMUSG00000029832.17	ENSMUST00000160133.2	1125	3	-42	2	37	-2	multi-exon	FALSE	canonical	3	21	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACCATTGTTAACTTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	51409686	51433854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_51410394_51427946_51428124_51433573
Isoform_156327_46	chr6	+	2496	4	FSM	ENSMUSG00000029832.17	ENSMUST00000005103.12	2544	4	50	-2	-29	2	multi-exon	FALSE	canonical	3	21	junction_2	2.05480466765633	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATATTTTATTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	51409699	51435750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_51410394_51427946_51428124_51433573_51433658_51434209
Isoform_156333_1317	chr6	+	1757	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	131	1	-2	-1	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51447640	51460683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
Isoform_156334_64	chr6	+	1975	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	-87	1	83	-1	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51447422	51460683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
Isoform_156335_112	chr6	+	1834	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	54	1	54	-1	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51447563	51460683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
Isoform_156337_22	chr6	+	2248	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	-359	0	-189	0	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447150	51460684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
Isoform_156345_5	chr6	+	2541	8	NIC	ENSMUSG00000038301.16	novel	2464	7	NA	NA	30	-9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	144.691790664551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAGCAAAACAAAACT	NA	False	NA	NA	False	ATTAAA	-6	NA	51500910	51567641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_51501015_51521520_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
Isoform_156346_284	chr6	+	2442	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	29	9	29	0	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51500909	51567650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
Isoform_156355_20	chr6	+	2529	8	NNC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	142.424917563105	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51500937	51567650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_51501015_51538997_51539045_51546773_51546889_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
Isoform_156356_6	chr6	+	2552	8	NNC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	146.232551723867	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51500909	51567650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_51501015_51538997_51539045_51546778_51546889_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
Isoform_156357_43	chr6	+	2457	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	7	0	6	0	multi-exon	FALSE	canonical	3	50	junction_1	112.931272118144	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51521509	51567650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
Isoform_156360_6	chr6	+	2545	7	FSM	ENSMUSG00000038301.16	ENSMUST00000114439.8	968	7	23	-1600	-19	2	multi-exon	FALSE	canonical	3	10	junction_1	127.070081276261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTTTGTTCGATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	51521526	51567652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_51521733_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
Isoform_156361_4	chr6	+	1028	2	ISM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	-58	4482	-4	-4482	5prime_fragment	FALSE	canonical	3	220	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAATTCTCTTCATTT	774	False	NA	NA	False	TTTAAA	-5	NA	52079924	52084686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_52080017_52083750
Isoform_156362_10	chr6	+	759	3	FSM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	-24	-327	-15	-13	multi-exon	FALSE	canonical	3	43	junction_2	88.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	808	False	NA	NA	False	NA	NA	NA	52079958	52089495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_52080017_52083750_52083877_52088920
Isoform_156364_4	chr6	+	1334	3	FSM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	-51	-875	3	535	multi-exon	FALSE	canonical	3	43	junction_2	88.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATATTACACAACTAAG	781	False	NA	NA	False	AATAAA	-15	NA	52079931	52090043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_52080017_52083750_52083877_52088920
Isoform_156368_14	chr6	+	897	3	FSM	ENSMUSG00000085412.8	ENSMUST00000125374.8	391	3	31	-537	-14	537	multi-exon	FALSE	canonical	3	144	junction_2	38	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTACACAACTAAGAT	809	False	NA	NA	False	AATAAA	-17	NA	52079959	52090045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_52080017_52083750_52083877_52089331
Isoform_156369_6	chr6	+	1802	3	FSM	ENSMUSG00000085412.8	ENSMUST00000189071.7	511	3	-25	-1266	20	1266	multi-exon	FALSE	canonical	3	13	junction_2	103.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAATAATGAAATACAG	798	False	NA	NA	False	NA	NA	NA	52079948	52091930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_52080017_52083750_52083877_52090322
Isoform_156374_8	chr6	+	392	2	FSM	ENSMUSG00000087658.3	ENSMUST00000159006.2	253	2	-88	-51	4	-48	multi-exon	FALSE	canonical	3	38	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGACCTAGAAACTAGC	NA	False	NA	11	True	AATAAA	-20	NA	52135415	52139051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_52135667_52138910
Isoform_156385_767	chr6	+	2956	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	36	293	2	-293	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTCTGTGAAATAATTC	NA	False	NA	13	True	AATAAA	-15	NA	52690749	52743472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
Isoform_156386_417	chr6	+	3247	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	36	2	2	-2	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACCTTTGTAAATGATT	NA	False	NA	NA	False	AATAAA	-25	NA	52690749	52743763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
Isoform_156405_9	chr6	+	3142	13	FSM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	363	-1087	-103	-2	multi-exon	FALSE	canonical	2	10	junction_6	4.03026742978125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAGCGTGTCAAGGGA	NA	False	NA	NA	False	ATTAAA	-15	NA	54016920	54278793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
Isoform_156406_4	chr6	+	3393	13	FSM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	108	-1083	68	-6	multi-exon	FALSE	canonical	2	10	junction_6	4.03026742978125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTGGAGCGTGTCAA	NA	False	NA	NA	False	ATTAAA	-11	NA	54016665	54278789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
Isoform_156409_153	chr6	+	1852	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	81	4806	81	0	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCCCTAGTTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	54572176	54618018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
Isoform_15641_2653	chr11	-	602	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	-4	-2	-4	-1	multi-exon	FALSE	canonical	3	5157	junction_4	2293.78611688187	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTGCCTGTGCCTGT	3526	False	NA	-7	True	NA	NA	NA	95966449	95963813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
Isoform_156410_150	chr6	+	6639	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	81	19	81	-19	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTCTTCAAAGGGTTT	NA	False	NA	13	True	AATAAA	-23	NA	54572176	54622805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
Isoform_156417_40	chr6	+	5201	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	102	0	-28	0	multi-exon	FALSE	canonical	3	54	junction_2	0.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTTGTCGTCTTTACTC	NA	False	NA	7	True	ATTAAA	-19	NA	54658710	54680836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_54658917_54665990_54666114_54675964
Isoform_15642_1570	chr11	-	558	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	21	4136	21	-1	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTGCCTGTGCCTGT	3500	False	NA	-7	True	NA	NA	NA	95966475	95963813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
Isoform_156420_6	chr6	+	2381	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	72	2850	-58	-140	multi-exon	TRUE	canonical	3	54	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATACTCGGTGTTATCAC	NA	False	NA	NA	False	AATATA	-40	NA	54658680	54677986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_54658917_54665990_54666114_54675964
Isoform_156429_39	chr6	+	6198	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-316	4	-316	-4	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTCTCCTGTTCTTTA	NA	False	NA	12	True	AATAAA	-22	NA	54793584	54870481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
Isoform_15643_1066	chr11	-	581	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	-2	4136	-2	-1	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTGCCTGTGCCTGT	3477	False	NA	-7	True	NA	NA	NA	95966498	95963813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
Isoform_156431_79	chr6	+	5252	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-316	950	-316	-950	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTTAATATTTAGTT	NA	False	NA	2	True	AATAAA	-15	NA	54793584	54869535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
Isoform_156450_5071	chr6	+	2384	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	747.261037786495	5071	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTCCATTTTT	NA	False	NA	39	True	ATTAAA	-33	NA	55014991	55056489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
Isoform_156451_3567	chr6	+	2417	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-44	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	747.261037786495	3567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATCCATCTGTTGTG	NA	False	NA	28	True	ATTAAA	-22	NA	55014947	55056478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
Isoform_156454_96	chr6	+	2457	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-73	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	747.261037786495	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTCCATTTTT	NA	False	NA	39	True	ATTAAA	-33	NA	55014918	55056489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
Isoform_156484_5	chr6	+	2652	18	FSM	ENSMUSG00000038022.12	ENSMUST00000053094.8	4270	18	80	1538	80	369	multi-exon	TRUE	canonical	1	1	junction_8	4.83570915636814	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGGTTGGTTCATTGG	NA	False	NA	NA	False	CATAAA	-34	NA	55180447	55295669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55253641_55255031_55255096_55256069_55256136_55261730_55261799_55274672_55274737_55277927_55278090_55285139_55285321_55286246_55286320_55295247
Isoform_156485_4	chr6	+	1961	12	ISM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	2	18166	2	6589	5prime_fragment	FALSE	canonical	3	71	junction_4	10.871906323522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGGAAGCACTCAGC	NA	False	NA	NA	False	NA	NA	NA	56691913	56720731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316
Isoform_156487_120	chr6	+	6665	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	4	1	4	-1	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56691915	56738896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
Isoform_156490_11	chr6	+	6746	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	-77	1	-49	-1	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56691834	56738896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
Isoform_156491_5	chr6	+	6769	17	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	31.7086344707558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56691905	56738896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56732588_56732683_56734256
Isoform_156492_9	chr6	+	6847	16	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	24.9411752373905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691912	56738897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706924_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
Isoform_156496_1680	chr6	+	2924	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	85	0	85	0	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56809128	56856343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
Isoform_156497_372	chr6	+	2117	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	53	839	53	-839	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTAGCTGTCATGGAGG	NA	False	NA	7	True	AATAAA	-19	NA	56809096	56855504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
Isoform_156498_192	chr6	+	2995	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	14	0	14	0	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56809057	56856343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
Isoform_156521_98	chr6	+	3071	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	398	-960	-53	3	multi-exon	FALSE	canonical	3	58	junction_1	7.80924932371864	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGGAGTCTTAATATTT	NA	False	NA	11	True	AATAAA	-21	NA	57680018	57716427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
Isoform_156522_3	chr6	+	3473	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	-7	-957	-7	0	multi-exon	TRUE	canonical	3	58	junction_1	7.80924932371864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGGAGTCTTAATA	NA	False	NA	8	True	AATAAA	-18	NA	57679613	57716424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
Isoform_156525_7	chr6	+	2281	17	NIC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-52	-62	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	52.6289710496985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGTTCTTTTCTTC	NA	False	NA	14	True	ATTAAA	-21	NA	58572907	58669434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_58573003_58573959_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_156526_3	chr6	+	2218	17	NIC	ENSMUSG00000029802.14	novel	600	5	NA	NA	-41	-63	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	59.5103719951405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCAGTGTTCTTTTCTT	NA	False	NA	13	True	ATTAAA	-20	NA	58572918	58669433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_58573003_58627445_58627529_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_156527_13	chr6	+	2110	16	NIC	ENSMUSG00000029802.14	novel	600	5	NA	NA	-15	-62	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	43.6165106353087	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGTTCTTTTCTTC	NA	False	NA	14	True	ATTAAA	-21	NA	58572944	58669434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_58573003_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_156528_17	chr6	+	2234	17	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-40	-63	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	52.4486355875918	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCAGTGTTCTTTTCTT	NA	False	NA	13	True	ATTAAA	-20	NA	58572919	58669433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_58573003_58573993_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_15653_376	chr11	-	1571	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	7	43	5	-43	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGCTGTGTTGATT	4218	False	NA	-5	True	NA	NA	NA	96002783	95990194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
Isoform_156530_28	chr6	+	2552	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	-62	3227	-62	-62	multi-exon	FALSE	canonical	3	51	junction_1	36.1961323900773	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGTTCTTTTCTTC	NA	False	NA	14	True	ATTAAA	-21	NA	58573593	58669434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_156533_166	chr6	+	2132	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	-16	62	2	-62	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGTTCTTTTCTTC	NA	False	NA	14	True	ATTAAA	-21	NA	58617532	58669434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_156534_9	chr6	+	5313	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	16	-3151	-2	-14	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTTCTAACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	58617564	58672647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_156536_12	chr6	+	4956	26	NIC	ENSMUSG00000029804.18	novel	418	4	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.96963767384168	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTTGTATTGTAATT	NA	False	NA	10	True	AATAAA	-18	NA	58808462	58897380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_58808628_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
Isoform_156538_19	chr6	+	5246	26	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	8.031537835309	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTTGTATTGTAATT	NA	False	NA	10	True	AATAAA	-18	NA	58808462	58897380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
Isoform_156540_18	chr6	+	5126	25	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	7.34551544973001	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTTGTATTGTAATT	NA	False	NA	10	True	AATAAA	-18	NA	58808447	58897380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
Isoform_156543_90	chr6	+	2943	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	63	1	63	-1	multi-exon	FALSE	canonical	3	130	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGATGACTTTTTCTGA	NA	False	NA	8	True	NA	NA	NA	59185917	59189017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_59186167_59186323
Isoform_156545_30	chr6	+	2794	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	0	213	0	-213	multi-exon	FALSE	canonical	3	130	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATGATGTTTTGGATTA	NA	False	NA	9	True	AATAAA	-19	NA	59185854	59188805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_59186167_59186323
Isoform_156546_10	chr6	+	3015	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	-12	4	-12	-4	multi-exon	FALSE	canonical	3	130	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTGATGACTTTTTC	NA	False	NA	5	True	NA	NA	NA	59185842	59189014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_59186167_59186323
Isoform_156548_5	chr6	+	3340	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	63	-396	63	396	multi-exon	FALSE	canonical	3	130	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCATGTTTATTCTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	59185917	59189414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_59186167_59186323
Isoform_156561_30	chr6	+	713	3	FSM	ENSMUSG00000029920.10	ENSMUST00000205118.3	600	3	-43	-70	3	-2	multi-exon	FALSE	canonical	3	133	junction_2	73	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTAGCAGAGCATTATG	1742	False	NA	3	True	AATAAA	-13	NA	65019607	65021185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65019715_65020189_65020430_65020819
Isoform_156567_180	chr6	+	4905	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	8	-12	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCACACCCTTT	1747	False	NA	16	True	AATAAA	-18	NA	65019612	65093033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_156568_32	chr6	+	4944	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	7	-12	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCACACCCTTT	1708	False	NA	16	True	AATAAA	-18	NA	65019573	65093033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_156569_185	chr6	+	4453	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1747	False	NA	NA	False	AATAAA	-15	NA	65019612	65092581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_15657_27	chr11	-	2026	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	7	-412	5	412	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTAGTGAATCACAGT	4218	False	NA	-17	True	AATAAA	-18	NA	96002783	95989739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
Isoform_156575_34	chr6	+	716	3	FSM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	12	6	-10	-6	multi-exon	FALSE	canonical	3	133	junction_2	64	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATTGTAGCAGAGCAT	1966	False	NA	-1	True	AATAAA	-9	NA	65019831	65021181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65019946_65020189_65020430_65020819
Isoform_156579_145	chr6	+	4914	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	242	12	-7	-12	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCACACCCTTT	1969	False	NA	16	True	AATAAA	-18	NA	65019834	65093033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_156581_20	chr6	+	5036	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	119	13	61	-13	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	1846	False	NA	15	True	AATAAA	-17	NA	65019711	65093032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_156582_28	chr6	+	4492	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	212	464	-15	-1	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1939	False	NA	NA	False	AATAAA	-15	NA	65019804	65092581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_156585_11	chr6	+	4638	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	62	468	4	-5	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGAGATTTGTTAATTA	1789	False	NA	NA	False	AATAAA	-11	NA	65019654	65092577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_15659_67	chr11	-	2222	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	7	322	-4	0	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668350	96658702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
Isoform_15660_8	chr11	-	2586	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	-28	-7	0	7	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTGGCTGCTGTTCAT	NA	False	NA	0	True	AATAAA	-22	NA	96668385	96658373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
Isoform_156603_7	chr6	+	1996	3	FSM	ENSMUSG00000029913.15	ENSMUST00000173538.2	1938	3	-54	-4	-20	4	multi-exon	FALSE	canonical	3	137	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACTAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	65755951	65809918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65756178_65771283_65771368_65808232
Isoform_156605_134	chr6	+	2154	15	FSM	ENSMUSG00000029913.15	ENSMUST00000031976.14	2155	15	1	0	1	0	multi-exon	FALSE	canonical	3	106	junction_5	23.473389188611	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGCTCTTGACTTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	65755972	65913360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
Isoform_156606_12	chr6	+	1632	11	FSM	ENSMUSG00000029913.15	ENSMUST00000031973.13	1488	11	-66	-78	-29	0	multi-exon	FALSE	canonical	2	2	junction_3	49.012753442344	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGCTCTTGACTTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	65755942	65913360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
Isoform_156615_26	chr6	+	1410	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	36	6111	1	89	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGGATGGATTGTGTT	NA	False	NA	29	True	AATATA	-19	NA	66512409	66518093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
Isoform_15662_3	chr11	-	2264	9	NNC	ENSMUSG00000020876.15	novel	2551	9	NA	NA	58	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	23.5978680181071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTGTTGCAATTTGT	NA	False	NA	-15	True	AATAAA	-14	NA	96668260	96658701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668149
Isoform_156626_8	chr6	+	4166	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114227.8	1125	5	-19	-3022	-11	-55	multi-exon	FALSE	canonical	2	75	junction_1	125.742544510599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873395	66998279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_66873500_66891436_66891495_66920808_66920862_66992708_66992828_66994447
Isoform_15663_3	chr11	-	2288	9	NNC	ENSMUSG00000020876.15	novel	2551	9	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	26.7628473821453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTGTTGCAATTTGT	NA	False	NA	-15	True	AATAAA	-14	NA	96668351	96658701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667729_96667888_96668280
Isoform_156631_8	chr6	+	4144	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	-4	-2264	-1	0	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCCTTTCTCTTCAT	NA	False	NA	57	True	AATAAA	-15	NA	66873419	66998334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
Isoform_156632_10	chr6	+	4068	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	-24	-2168	-7	-96	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTGAGAGAAGAGTCA	NA	False	NA	20	True	AATAAA	-31	NA	66873399	66998238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
Isoform_156635_48	chr6	+	4024	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	1	-55	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_1	138.5	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873418	66998279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_66873500_66992716_66992828_66994447
Isoform_156638_10	chr6	+	4134	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	2	19	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_1	138.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTGACATTGTCTAAG	NA	False	NA	76	True	AATAAA	-34	NA	66873382	66998353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_66873500_66992716_66992828_66994447
Isoform_15664_73	chr11	-	2179	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	19	-1	-9	1	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTGTTGCAATTTGT	NA	False	NA	-15	True	AATAAA	-14	NA	96668366	96658701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
Isoform_156642_53	chr6	+	4150	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	43	55	0	-55	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873423	66998279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
Isoform_156643_10	chr6	+	4247	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	0	1	0	-1	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCCCTTTCTCTTCA	NA	False	NA	56	True	AATAAA	-14	NA	66873380	66998333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
Isoform_156645_13	chr6	+	4178	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114226.8	1155	5	-17	-3006	-6	-55	multi-exon	FALSE	canonical	2	34	junction_3	135.972423674803	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873400	66998279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_66873512_66891436_66891495_66920808_66920867_66992708_66992828_66994447
Isoform_156647_116	chr6	+	4099	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	18	-3369	1	-52	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCATTGACTCCTTTC	NA	False	NA	5	True	ATTAAA	-20	NA	66873424	66998282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
Isoform_15665_8	chr11	-	2504	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	19	-326	-9	4	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCCCTGGCTGCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	96668366	96658376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
Isoform_156652_38	chr6	+	4186	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	-1	-3437	-1	16	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCACTTGACATTGTCT	NA	False	NA	73	True	AATAAA	-31	NA	66873405	66998350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
Isoform_156664_777	chr6	+	1662	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	387	13425	0	0	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5872	False	NA	37	True	AATATA	-25	NA	67243994	67261295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_15668_6	chr11	-	2219	8	NNC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	28.5249622153607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTGTTGCAATTTGT	NA	False	NA	-15	True	AATAAA	-14	NA	96668342	96658701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667729_96667888_96668280
Isoform_156693_1189	chr6	+	1616	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	0	1	0	-1	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	5872	False	NA	36	True	AATATA	-24	NA	67243994	67261294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_156696_205	chr6	+	1646	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-28	-1	0	1	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTCACTTCATTTGTG	5844	False	NA	38	True	AATATA	-26	NA	67243966	67261296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_156727_605	chr6	+	1642	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	28	-3	0	-2	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCTTTCACTTCATTT	5872	False	NA	35	True	AATATA	-23	NA	67243994	67261293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_156748_1039	chr6	+	1600	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	0	-264	0	0	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5871	False	NA	37	True	AATATA	-25	NA	67243993	67261295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_15679_1284	chr11	-	3514	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	16	17	11	0	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714823	96708256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
Isoform_15680_197	chr11	-	3558	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	-28	17	-28	0	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714867	96708256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
Isoform_156821_163	chr6	+	4496	17	FSM	ENSMUSG00000031668.15	ENSMUST00000034093.15	4513	17	11	6	11	-6	multi-exon	FALSE	canonical	3	52	junction_8	9.41408519188137	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATAGTTGACTCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	70821509	70882223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858467_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
Isoform_156826_184	chr6	+	1663	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	22	2	-2	-1	multi-exon	FALSE	canonical	3	170	junction_2	14.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCTTTGTGTCAGTG	NA	False	NA	4	True	AATAAA	-16	NA	71248682	71262301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71248825_71259134_71259302_71260947
Isoform_156828_7	chr6	+	1783	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	-97	1	-97	0	multi-exon	FALSE	canonical	3	170	junction_2	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTGTGTCAGTGC	NA	False	NA	5	True	AATAAA	-17	NA	71248563	71262302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71248825_71259134_71259302_71260947
Isoform_156829_11	chr6	+	3165	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	26	-1504	2	1504	multi-exon	FALSE	canonical	3	170	junction_2	14.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGCCTTCACAGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	71248686	71263807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71248825_71259134_71259302_71260947
Isoform_156831_163	chr6	+	2873	2	FSM	ENSMUSG00000073018.7	ENSMUST00000114185.4	2874	2	1	0	1	0	multi-exon	FALSE	canonical	3	49	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGTGATGTGATT	NA	False	NA	11	True	NA	NA	NA	71270749	71279864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71270843_71277084
Isoform_156834_29	chr6	+	3280	4	FSM	ENSMUSG00000052656.13	ENSMUST00000064637.11	3264	4	-23	7	-23	-7	multi-exon	FALSE	canonical	3	15	junction_3	2.16024689946929	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGAAGGTTGTAGGTT	NA	False	NA	-2	True	AATAAA	-9	NA	71470854	71487858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71471873_71473814_71473955_71482717_71482834_71485852
Isoform_156838_366	chr6	+	2521	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	129	4	-3	-4	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTTGTATATTATGCC	NA	False	NA	19	True	NA	NA	NA	71520909	71558559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
Isoform_156839_68	chr6	+	2583	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	67	4	12	-4	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTTGTATATTATGCC	NA	False	NA	19	True	NA	NA	NA	71520847	71558559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
Isoform_156842_8	chr6	+	2466	5	NIC	ENSMUSG00000053119.12	novel	2654	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	153.936675292147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATATTATGCCTTTG	NA	False	NA	23	True	NA	NA	NA	71520907	71558563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_71521018_71537880_71538061_71551098_71551221_71554714_71554830_71556624
Isoform_156844_7	chr6	+	2495	6	NIC	ENSMUSG00000053119.12	novel	347	4	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	151.398282685108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATATTATGCCTTT	NA	False	NA	22	True	NA	NA	NA	71521350	71558562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_71521430_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
Isoform_156849_42	chr6	+	3639	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	278	7	-31	-7	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAGTGTAATGTTG	1553	False	NA	NA	False	AATAAA	-20	NA	71684822	71787687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
Isoform_156850_4	chr6	+	2741	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	250	933	-59	-469	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTCAAGTCCTAGTGTA	1525	False	NA	NA	False	AATAAA	-14	NA	71684794	71786761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
Isoform_156859_1218	chr6	+	2713	15	FSM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	29	-14	-19	1	multi-exon	FALSE	canonical	3	675	junction_4	225.763692603481	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	13	True	AATAAA	-20	NA	71808343	71852242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156862_60	chr6	+	2766	15	FSM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	-31	-7	-31	1	multi-exon	FALSE	canonical	3	675	junction_4	225.763692603481	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTACTCTATCCCT	NA	False	NA	6	True	AATAAA	-13	NA	71808283	71852235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156866_29	chr6	+	2690	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	424.422768463866	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTACTCTATCCCT	NA	False	NA	6	True	AATAAA	-13	NA	71808344	71852235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156868_49	chr6	+	2596	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_5	405.973692563021	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808360	71852238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156873_740	chr6	+	2672	15	FSM	ENSMUSG00000052337.16	ENSMUST00000101301.10	2299	15	-52	-321	-18	1	multi-exon	FALSE	canonical	3	438	junction_4	278.631248156016	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTACTCTATCCCT	NA	False	NA	6	True	AATAAA	-13	NA	71808344	71852235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156875_33	chr6	+	2736	15	FSM	ENSMUSG00000052337.16	ENSMUST00000101301.10	2299	15	-109	-328	-27	1	multi-exon	TRUE	canonical	3	438	junction_4	278.631248156016	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	13	True	AATAAA	-20	NA	71808287	71852242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156880_88	chr6	+	2582	14	NIC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_5	436.803951799537	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808344	71852241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156884_101	chr6	+	2672	15	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-18	0	combination_of_known_junctions	TRUE	canonical	3	160	junction_4	344.10840870106	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808344	71852238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829749_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156887_38	chr6	+	2484	13	FSM	ENSMUSG00000052337.16	ENSMUST00000166938.8	2413	13	-57	-14	-18	7	multi-exon	FALSE	canonical	3	41	junction_4	399.840558500788	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTTTTCAAAGCTGCC	NA	False	NA	19	True	AATAAA	-26	NA	71808344	71852248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156888_44	chr6	+	3546	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1154	junction_4	129.83740400705	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808355	71852238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_156909_44	chr6	+	3314	20	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	1	27324	1	1	5prime_fragment	FALSE	canonical	3	275	junction_3	22.8414989005135	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71886045	71932135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
Isoform_156917_519	chr6	+	6098	34	FSM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	1	3117	1	-3117	multi-exon	FALSE	canonical	3	275	junction_3	38.128991835157	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71886045	71956342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
Isoform_156966_77	chr6	+	2218	8	NNC	ENSMUSG00000056091.13	novel	2258	7	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	19.9693642914361	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGAGTGTTTGTTCC	NA	False	NA	17	True	NA	NA	NA	72074592	72131552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414_72131330_72131349
Isoform_156967_13	chr6	+	2188	7	FSM	ENSMUSG00000056091.13	ENSMUST00000069994.11	2258	7	61	9	30	-9	multi-exon	FALSE	canonical	3	38	junction_5	8.15304987242334	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGACTTTGAGTGTT	NA	False	NA	11	True	NA	NA	NA	72074636	72131546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
Isoform_15697_205	chr11	-	4580	5	FSM	ENSMUSG00000038615.18	ENSMUST00000167149.8	4596	5	11	5	10	-5	multi-exon	FALSE	canonical	3	79	junction_4	530.254891538023	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCACTTTCTCCCCCCTC	NA	False	NA	-11	True	AATAAA	-28	NA	96720317	96708244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720236
Isoform_156971_17	chr6	+	4934	3	ISM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	-13	0	4	0	intron_retention	FALSE	canonical	3	33	junction_1	8	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGCCAAAAGTTGTG	8313	False	NA	15	True	AATAAA	-15	NA	72324303	72330131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_72324499_72324575_72324695_72325511
Isoform_156972_64	chr6	+	4618	4	FSM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	-13	0	4	0	multi-exon	FALSE	canonical	3	33	junction_1	6.54896090146283	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGCCAAAAGTTGTG	8313	False	NA	15	True	AATAAA	-15	NA	72324303	72330131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72324499_72324575_72324695_72325511_72325664_72325979
Isoform_156975_18	chr6	+	5010	2	FSM	ENSMUSG00000058706.6	ENSMUST00000205472.2	1033	2	-5	-3972	4	-1	multi-exon	FALSE	canonical	3	49	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTGCCAAAAGTTGT	8313	False	NA	14	True	AATAAA	-14	NA	72324303	72330130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72324695_72325511
Isoform_156976_4	chr6	+	4691	3	FSM	ENSMUSG00000058706.6	ENSMUST00000204152.2	2118	3	-42	-2531	-1	0	multi-exon	FALSE	canonical	3	40	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGCCAAAAGTTGTG	8317	False	NA	15	True	AATAAA	-15	NA	72324307	72330131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72324695_72325511_72325664_72325979
Isoform_156977_83	chr6	+	1507	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	34	5	7	-5	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCAGTGTGTTCTGG	NA	False	NA	5	True	ATTAAA	-16	NA	72332463	72336740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
Isoform_156978_34	chr6	+	1538	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	4	4	4	-4	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCAGTGTGTTCTGGA	NA	False	NA	6	True	ATTAAA	-17	NA	72332433	72336741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
Isoform_156979_4	chr6	+	3169	16	NIC	ENSMUSG00000053460.9	novel	2929	15	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	15.9016421234482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCACTACCTGGCTTAT	1285	False	NA	6	True	NA	NA	NA	72391294	72407689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72395999_72396250_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
Isoform_15698_2317	chr11	-	4632	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	5	17	5	0	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	2317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720789	96708256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
Isoform_156980_59	chr6	+	2906	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	24	-1	-9	1	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTGGCTTATTAATAGT	1305	False	NA	13	True	NA	NA	NA	72391314	72407696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
Isoform_156982_5	chr6	+	2553	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	2	374	2	-63	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTAGTTGCTTTTCCCTT	1283	False	NA	NA	False	NA	NA	NA	72391292	72407321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
Isoform_156984_3	chr6	+	5570	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	6	-2647	6	2647	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTATTGTGCAGTGTGG	1287	False	NA	NA	False	AATAAA	-21	NA	72391296	72410342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
Isoform_156986_56	chr6	+	1195	10	FSM	ENSMUSG00000056737.15	ENSMUST00000071044.13	1247	10	52	0	52	0	multi-exon	TRUE	canonical	3	14	junction_1	22.7389913671443	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	False	NA	12	True	AATAAA	-23	NA	72521425	72539966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72521450_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
Isoform_156987_58	chr6	+	1245	10	FSM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	150	5	-9	-3	multi-exon	FALSE	canonical	3	46	junction_1	14.6439217576592	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTTCCTGTGTGGCT	NA	False	NA	7	True	AATAAA	-18	NA	72526405	72539961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
Isoform_156988_3	chr6	+	1290	10	NIC	ENSMUSG00000056737.15	novel	515	5	NA	NA	96	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	24.7026764181985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCCTGTGTGGCTTGT	NA	False	NA	10	True	AATAAA	-21	NA	72526730	72539964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_72526852_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
Isoform_15699_83	chr11	-	4670	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	-21	5	-21	-5	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCACTTTCTCCCCCCTC	NA	False	NA	-11	True	AATAAA	-28	NA	96720815	96708244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
Isoform_156990_3198	chr6	+	1964	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	127	936	-26	47	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	3198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTTGTTAAGTCAAGAG	NA	False	NA	18	True	TATAAA	-23	NA	72575584	72584472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
Isoform_156992_39	chr6	+	2090	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	0	937	0	46	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTTGTTAAGTCAAGA	NA	False	NA	17	True	TATAAA	-22	NA	72575457	72584471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
Isoform_157011_1752	chr6	+	1246	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	267	6	-3	1	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	1752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTGTGAAGACTTT	2582	False	NA	13	True	AATAAA	-17	NA	73225631	73253888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
Isoform_157023_3	chr6	+	1761	9	ISM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-4	15961	-4	230	5prime_fragment	FALSE	canonical	3	41	junction_4	10.4155832769941	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGTTCACTGACTTAG	NA	False	NA	NA	False	AATAAA	-10	NA	81900645	81920935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409
Isoform_157024_31	chr6	+	2831	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-3	1364	-3	489	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTATTTTTATAT	NA	False	NA	NA	False	NA	NA	NA	81900646	81935532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
Isoform_157026_11	chr6	+	3378	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-4	818	-4	-159	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCCTTGGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	81900645	81936078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
Isoform_157027_29	chr6	+	3232	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-3	963	-3	-304	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGATGATCCTGTATTTA	NA	False	NA	NA	False	NA	NA	NA	81900646	81935933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
Isoform_157028_4	chr6	+	3279	17	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-1	-158	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	11.5805602196094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTGGCTTCTTCG	NA	False	NA	NA	False	NA	NA	NA	81900659	81936079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
Isoform_157029_3	chr6	+	1945	4	NIC	ENSMUSG00000035104.15	novel	1773	3	NA	NA	14	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.2138486760204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTCTTTTGCTTCGTG	NA	False	NA	NA	False	AATAAA	-11	NA	82018617	82070072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_82018883_82021295_82021490_82048035_82048224_82068774
Isoform_157030_56	chr6	+	1760	3	FSM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	13	0	13	0	multi-exon	FALSE	canonical	3	34	junction_1	1.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCGTGTCTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	82018616	82070080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_82018883_82048035_82048224_82068774
Isoform_157033_551	chr6	+	1923	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	21	1	21	-1	multi-exon	FALSE	canonical	0	0	junction_8	176.542723818721	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82923903	83007163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
Isoform_157034_37	chr6	+	2055	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	21	-131	21	5	multi-exon	FALSE	canonical	0	0	junction_8	176.542723818721	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGCATCAGAACCTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	82923903	83007295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
Isoform_157035_50	chr6	+	1782	9	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	187.231641289607	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82923903	83007163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83006750
Isoform_157036_14	chr6	+	3526	9	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	20	-1	intron_retention	FALSE	canonical	0	0	junction_7	186.808683885413	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82923902	83007163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
Isoform_157039_4	chr6	+	2938	16	NNC	ENSMUSG00000000693.11	novel	4098	14	NA	NA	39	657	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	3.0739045022396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACTGATGCAGCGG	2268	False	NA	NA	False	TATAAA	-15	NA	83011192	83028305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015591_83021095_83021153_83021727_83021788_83024968_83025189_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
Isoform_157040_8	chr6	+	2851	14	FSM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	9	1238	9	657	multi-exon	FALSE	canonical	2	3	junction_1	2.5903781908435	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACTGATGCAGCGG	2238	False	NA	NA	False	TATAAA	-15	NA	83011162	83028305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015591_83024968_83025189_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
Isoform_157041_27	chr6	+	1396	12	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	307.048519599802	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5424	False	NA	8	True	ATTAAA	-18	NA	83031712	83034662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83031814_83031891_83031995_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_157042_21	chr6	+	1514	12	FSM	ENSMUSG00000068328.11	ENSMUST00000203915.4	1491	12	-20	-3	-3	-1	multi-exon	FALSE	canonical	3	25	junction_10	313.3608012109	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5403	False	NA	8	True	ATTAAA	-18	NA	83031691	83034662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
Isoform_157043_1436	chr6	+	1434	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	208	127	0	-1	multi-exon	FALSE	canonical	3	960	junction_10	78.8006166859286	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5421	False	NA	8	True	ATTAAA	-18	NA	83031709	83034662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_157044_93	chr6	+	1522	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	120	127	-5	-1	multi-exon	FALSE	canonical	3	960	junction_10	78.8006166859286	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5333	False	NA	8	True	ATTAAA	-18	NA	83031621	83034662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_157045_27	chr6	+	1641	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	1	127	1	-1	multi-exon	TRUE	canonical	3	960	junction_10	78.8006166859286	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5214	False	NA	8	True	ATTAAA	-18	NA	83031502	83034662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_157049_53	chr6	+	1657	11	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	960	junction_9	76.9269783626005	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5424	False	NA	8	True	ATTAAA	-18	NA	83031712	83034662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_157060_4	chr6	+	976	8	ISM	ENSMUSG00000069678.11	ENSMUST00000165164.9	918	9	14	7	14	1	intron_retention	FALSE	canonical	3	163	junction_1	15.5366584277972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACTTTTCATCTTCC	120	False	NA	17	True	AATAAA	-9	NA	83055340	83057829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530
Isoform_157061_157	chr6	+	898	9	FSM	ENSMUSG00000069678.11	ENSMUST00000165164.9	918	9	13	7	13	1	multi-exon	FALSE	canonical	3	163	junction_1	14.5408906192159	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACTTTTCATCTTCC	119	False	NA	17	True	AATAAA	-9	NA	83055339	83057829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
Isoform_157063_18	chr6	+	1050	8	ISM	ENSMUSG00000069678.11	ENSMUST00000092614.9	866	9	233	-1	-7	1	3prime_fragment	FALSE	canonical	3	182	junction_2	10.5521058929254	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACTTTTCATCTTCC	94	False	NA	17	True	AATAAA	-9	NA	83055603	83057829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
Isoform_157065_347	chr6	+	641	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	48	6	-32	-6	multi-exon	FALSE	canonical	3	747	junction_2	17.5	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGCTATTTTTCTCA	7431	False	NA	NA	False	ATTAAA	-13	NA	83086068	83086914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83086185_83086294_83086408_83086502
Isoform_157066_4	chr6	+	735	2	NIC	ENSMUSG00000030037.10	novel	695	3	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	747	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGCTATTTTTCTCA	7447	False	NA	NA	False	ATTAAA	-13	NA	83086084	83086914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83086408_83086502
Isoform_157067_804	chr6	+	2771	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	9	0	9	0	multi-exon	FALSE	canonical	3	308	junction_2	15.1070255914995	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCCTTGCTTTAGACA	5182	False	NA	28	True	AATAAA	-17	NA	83092485	83095879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
Isoform_157073_19	chr6	+	2542	3	NIC	ENSMUSG00000030036.9	novel	2780	4	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	153	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGACCCCTTGCTTTAG	5178	False	NA	25	True	AATAAA	-14	NA	83092481	83095876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83092908_83093608_83093806_83093957
Isoform_157076_17	chr6	+	3238	2	FSM	ENSMUSG00000030036.9	ENSMUST00000145403.3	684	2	-1009	-1545	11	-2	multi-exon	FALSE	canonical	3	345	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCCCTTGCTTTAGA	5184	False	NA	26	True	AATAAA	-15	NA	83092487	83095877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83093806_83093957
Isoform_157078_12	chr6	+	2166	12	FSM	ENSMUSG00000034930.17	ENSMUST00000065512.11	2191	12	23	2	23	-2	multi-exon	FALSE	canonical	3	13	junction_1	17.934223251548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTCTTTCACTTGTC	3552	False	NA	16	True	ATTAAA	-16	NA	83112815	83129558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83113041_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_157079_3	chr6	+	2635	13	FSM	ENSMUSG00000034930.17	ENSMUST00000121093.8	2597	13	-40	2	-40	-2	multi-exon	FALSE	canonical	0	0	junction_1	26.6061814037432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTCTTTCACTTGTC	4766	False	NA	16	True	ATTAAA	-16	NA	83114029	83129558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83114438_83114941_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_157080_10	chr6	+	3132	12	FSM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	-55	3	-34	-3	multi-exon	FALSE	canonical	0	0	junction_1	21.3022328399382	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	4772	False	NA	15	True	ATTAAA	-15	NA	83114035	83129557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_157081_69	chr6	+	2253	12	NIC	ENSMUSG00000034930.17	novel	653	6	NA	NA	-143	-3	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	15.2196045821291	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	1507	False	NA	15	True	ATTAAA	-15	NA	83119229	83129557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83119543_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_157085_3	chr6	+	2049	11	NIC	ENSMUSG00000034930.17	novel	653	6	NA	NA	-150	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	23.9676865800602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGATGCCTTCTTTCACTTG	1500	False	NA	14	True	ATTAAA	-14	NA	83119222	83129556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83119543_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_157086_26	chr6	+	2021	11	ISM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	8740	3	-1985	-3	3prime_fragment	FALSE	canonical	3	54	junction_8	8.87693640846886	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	1088	False	NA	15	True	ATTAAA	-15	NA	83122830	83129557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_157089_4	chr6	+	2113	11	NNC	ENSMUSG00000034930.17	novel	2191	12	NA	NA	-2001	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	21.0817456582703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	1072	False	NA	15	True	ATTAAA	-15	NA	83122814	83129557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126368_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_157092_1192	chr6	+	4089	28	FSM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	30	-1	-1	0	multi-exon	TRUE	canonical	3	372	junction_1	39.6793042772762	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	523	False	NA	NA	False	ATTAAA	-16	NA	83142931	83177099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
Isoform_157094_51	chr6	+	4147	28	NIC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	89.8211910680514	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	539	False	NA	NA	False	ATTAAA	-16	NA	83142947	83177099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83143051_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
Isoform_1571_5	chr10	-	3770	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	-14	59	-14	-59	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTACTGGAGGGATTATA	NA	False	NA	NA	False	NA	NA	NA	7423652	7393096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
Isoform_15712_211	chr11	-	3956	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-28	-6	intron_retention	FALSE	canonical	3	150	junction_3	570.471345078397	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	False	NA	-12	True	AATAAA	-27	NA	96714867	96708245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
Isoform_157120_87	chr6	+	3087	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40020	-1	2	0	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCATGTCTAATAACTGAG	5728	False	NA	25	True	AATAAA	-26	NA	83254376	83281927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_157122_45	chr6	+	2339	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	39984	783	-34	685	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCTGAGTGGATT	5692	False	NA	8	True	NA	NA	NA	83254340	83281143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_157123_369	chr6	+	1897	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40020	1189	2	279	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGCAAGTGGCCAGTG	5728	False	NA	10	True	AATAAA	-20	NA	83254376	83280737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_157124_117	chr6	+	2305	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40018	783	0	685	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCTGAGTGGATT	5726	False	NA	8	True	NA	NA	NA	83254374	83281143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_157131_71	chr6	+	1790	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-5	279	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGCAAGTGGCCAGTG	5721	False	NA	10	True	AATAAA	-20	NA	83254369	83280737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_157132_18	chr6	+	2194	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-3	685	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCTGAGTGGATT	5723	False	NA	8	True	NA	NA	NA	83254371	83281143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_157133_13	chr6	+	2943	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	27	-4	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACGCCATGTCTAATAA	5753	False	NA	20	True	AATAAA	-21	NA	83254401	83281922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_157134_30	chr6	+	1990	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-34	279	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	141.343845443047	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGCAAGTGGCCAGTG	5692	False	NA	10	True	AATAAA	-20	NA	83254340	83280737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_157141_707	chr6	+	4303	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	24	85	4	-84	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCTTTGAAGTGTG	NA	False	NA	13	True	AATAAA	-14	NA	83303021	83320673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
Isoform_157142_26	chr6	+	4381	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	31	0	11	0	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTATTATCTACGTC	NA	False	NA	98	True	ATTAAA	-21	NA	83303028	83320758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
Isoform_15715_76	chr11	-	3566	4	NNC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	-16	0	intron_retention	FALSE	canonical	2	47	junction_3	618.964906562202	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96713567	96708256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96713462
Isoform_157155_400	chr6	+	538	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	33	1741	-12	-1	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGCCATGCTTCAG	382	False	NA	25	True	ATTAAA	-25	NA	83326460	83335377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
Isoform_157156_34	chr6	+	560	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	11	1741	11	-1	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGCCATGCTTCAG	360	False	NA	25	True	ATTAAA	-25	NA	83326438	83335377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
Isoform_157157_7	chr6	+	2247	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	33	32	-12	-32	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAAAAGTT	382	False	NA	NA	False	NA	NA	NA	83326460	83337086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
Isoform_157160_92	chr6	+	1256	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-15	1	-15	-1	multi-exon	FALSE	canonical	3	115	junction_1	5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTTCTGTCCCTGTTC	NA	False	NA	20	True	AATAAA	-31	NA	83688230	83715294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83688526_83710080_83710269_83714521
Isoform_157162_3	chr6	+	2300	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-14	-1044	-14	1044	multi-exon	FALSE	canonical	3	115	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATAATTAA	NA	False	NA	NA	False	NA	NA	NA	83688231	83716339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83688526_83710080_83710269_83714521
Isoform_157163_15	chr6	+	1161	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	162	0	-18	0	multi-exon	FALSE	canonical	3	32	junction_1	71.6054001687955	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9466	False	NA	11	True	AATAAA	-19	NA	83772171	83779536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_157164_3	chr6	+	1391	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	-67	-1	-21	1	multi-exon	FALSE	canonical	3	32	junction_1	71.6054001687955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9237	False	NA	12	True	AATAAA	-20	NA	83771942	83779537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_157166_142	chr6	+	1189	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	216	0	-10	0	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9474	False	NA	13	True	AATAAA	-21	NA	83772179	83779538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_157167_4	chr6	+	1376	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	27	2	-19	0	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9285	False	NA	11	True	AATAAA	-19	NA	83771990	83779536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_157168_5	chr6	+	1252	11	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	95.9064127157303	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9472	False	NA	11	True	AATAAA	-19	NA	83772177	83779536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_83772265_83773888_83773974_83774158_83774258_83774762_83774826_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_157169_12	chr6	+	1298	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	77.5253045108897	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9465	False	NA	12	True	AATAAA	-20	NA	83772170	83779537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_83772265_83773888_83774075_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_157170_21	chr6	+	1253	10	FSM	ENSMUSG00000034744.14	ENSMUST00000146117.8	1049	10	18	-222	-9	0	multi-exon	FALSE	canonical	3	35	junction_1	70.680816193489	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9502	False	NA	13	True	AATAAA	-21	NA	83772207	83779538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83772357_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_157171_5	chr6	+	1384	10	NNC	ENSMUSG00000034744.14	novel	1049	10	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	98.0303555909288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9471	False	NA	12	True	AATAAA	-20	NA	83772176	83779537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_83772357_83773888_83774075_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_157176_32	chr6	+	4371	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_22	83.1527365755331	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83891361	83963852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
Isoform_157177_24	chr6	+	4253	25	NIC	ENSMUSG00000030016.15	novel	4366	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_22	82.4636283460775	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891376	83963851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
Isoform_157178_115	chr6	+	6443	28	FSM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	-23	-221	2	1	multi-exon	FALSE	canonical	3	109	junction_24	71.435679050644	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83891350	83963852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
Isoform_157180_93	chr6	+	6334	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	162	junction_24	66.2109436064344	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891356	83963851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
Isoform_157182_14	chr6	+	4224	24	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_20	89.841343037126	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83891355	83963852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
Isoform_157183_10	chr6	+	4151	23	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_20	89.2674155983207	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891327	83963853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
Isoform_157185_54	chr6	+	6287	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	77.5262123413752	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83891353	83963852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
Isoform_157186_49	chr6	+	6162	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	72.2910782877113	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83891376	83963852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
Isoform_157189_8	chr6	+	4921	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	88.6097504218497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83891359	83963852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
Isoform_157190_8	chr6	+	4802	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	85.466943317285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83891376	83963852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
Isoform_157195_7	chr6	+	6458	28	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	88.3838430014429	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891344	83963851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
Isoform_157196_10	chr6	+	6347	27	FSM	ENSMUSG00000030016.15	ENSMUST00000204751.3	9033	27	5	2681	-1	0	multi-exon	FALSE	canonical	3	28	junction_1	85.3890158256238	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891353	83963851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
Isoform_1572_36	chr10	-	6435	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	54	-2674	3	-2	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGTTCTCTTAC	NA	False	NA	-3	True	ATTAAA	-14	NA	7423584	7390363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
Isoform_157202_3	chr6	+	1611	3	FSM	ENSMUSG00000033726.9	ENSMUST00000045942.9	1561	3	53	-103	53	-1	multi-exon	FALSE	canonical	2	3	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGTAGCTATCCATCT	9473	False	NA	NA	False	AATAAA	-14	NA	85164472	85181443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85165346_85171019_85171205_85180890
Isoform_157203_1796	chr6	+	2486	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	-6	6	-6	-6	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTGCAACAATGCCTT	NA	False	NA	22	True	AATAAA	-16	NA	85408964	85423411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
Isoform_157206_24	chr6	+	2788	12	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	411	junction_7	62.0754006986731	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTGCAACAATGCCTT	NA	False	NA	22	True	AATAAA	-16	NA	85408964	85423411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
Isoform_157210_20	chr6	+	2374	12	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	152.310307438683	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTGCAACAATGCCTT	NA	False	NA	22	True	AATAAA	-16	NA	85408971	85423411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
Isoform_157220_9962	chr6	+	1812	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	537	92	-1	-92	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	9962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGGTGTGTTTTTCA	5147	False	NA	14	True	AATAAA	-12	NA	85429032	85445365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
Isoform_157221_552	chr6	+	1904	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	537	0	-1	0	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	5147	False	NA	16	True	AGTAAA	-18	NA	85429032	85445457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
Isoform_157222_1112	chr6	+	1876	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	478	87	-27	-87	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTTTTTCATAAAC	5088	False	NA	19	True	AATAAA	-17	NA	85428973	85445370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
Isoform_157224_412	chr6	+	2368	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	-17	90	-17	-90	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTGTGTTTTTCATA	4593	False	NA	16	True	AATAAA	-14	NA	85428478	85445367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
Isoform_157254_3	chr6	+	11314	23	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	11163	23	NA	NA	-39	0	multi-exon	FALSE	canonical	3	3	junction_18	13.3957560813765	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGCTTAGTCCCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	85564588	85781039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85751381_85751472_85755981_85757136_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
Isoform_157255_3	chr6	+	5153	16	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	2290	9	NA	NA	-16554	0	multi-exon	FALSE	canonical	3	3	junction_11	13.4669966956259	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGCTTAGTCCCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	85599890	85781039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr6_+_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85751381_85751472_85755981_85757136_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
Isoform_157256_12	chr6	+	2195	7	FSM	ENSMUSG00000054226.14	ENSMUST00000113753.8	2222	7	27	0	8	0	multi-exon	FALSE	canonical	3	4	junction_1	87.3983536585342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTTATTATGTC	3436	False	NA	24	True	NA	NA	NA	85892746	85907266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85892773_85896898_85897007_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
Isoform_157257_4	chr6	+	2210	7	NIC	ENSMUSG00000054226.14	novel	2222	7	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	84.4801094275386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3393	False	NA	20	True	NA	NA	NA	85892703	85907262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_85892773_85898404_85898494_85900114_85900199_85901341_85901505_85904222_85904346_85904789_85904967_85905757
Isoform_157258_9	chr6	+	1134	5	FSM	ENSMUSG00000054226.14	ENSMUST00000202803.4	716	5	1	-419	1	-6	multi-exon	FALSE	canonical	3	153	junction_1	23.847169643377	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAATTGCTAGATTTGGA	3410	False	NA	NA	False	ATTAAA	-12	NA	85892720	85905496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789
Isoform_157260_20	chr6	+	2874	5	FSM	ENSMUSG00000054226.14	ENSMUST00000202803.4	716	5	27	-2185	8	-2	multi-exon	FALSE	canonical	3	153	junction_1	23.847169643377	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3436	False	NA	20	True	NA	NA	NA	85892746	85907262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789
Isoform_157261_159	chr6	+	2115	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	-14	2	-5	-2	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3404	False	NA	20	True	NA	NA	NA	85892714	85907262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
Isoform_157266_10	chr6	+	2404	6	NIC	ENSMUSG00000054226.14	novel	2222	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	78.5636048052786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTTATTATGTC	3436	False	NA	24	True	NA	NA	NA	85892746	85907266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_85893090_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
Isoform_157268_10	chr6	+	2194	6	NIC	ENSMUSG00000054226.14	novel	818	5	NA	NA	173	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	78.5636048052786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3642	False	NA	20	True	NA	NA	NA	85892952	85907262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_85893090_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
Isoform_157270_14	chr6	+	4481	7	NNC	ENSMUSG00000029999.15	novel	4527	6	NA	NA	-14	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	3.71558280160133	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAAATCTCAAGACTGAA	NA	False	NA	NA	False	AATGAA	-14	NA	86172218	86252694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_86172528_86206412_86206467_86240140_86240259_86246911_86247062_86248361_86248472_86248929_86251633_86251657
Isoform_157274_4481	chr6	+	1565	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	78	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_2	62	4481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	8695	False	NA	32	True	AATAAA	-16	NA	86342705	86347040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86342802_86343591_86343733_86345712
Isoform_157275_96	chr6	+	1643	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_2	62	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	8617	False	NA	32	True	AATAAA	-16	NA	86342627	86347040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86342802_86343591_86343733_86345712
Isoform_157284_986	chr6	+	387	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	243	425	5	-4	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGCGTTTCTGCTGTTG	NA	False	NA	25	True	AATAAA	-16	NA	86348528	86355885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
Isoform_157285_635	chr6	+	439	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	191	425	-47	-4	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGCGTTTCTGCTGTTG	NA	False	NA	25	True	AATAAA	-16	NA	86348476	86355885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
Isoform_157289_4	chr6	+	772	7	NIC	ENSMUSG00000071337.12	novel	823	8	NA	NA	-2	-65	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	55.5230182496913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAAATGTGTTTGTGT	9764	False	NA	NA	False	TATAAA	-36	NA	86381283	86400766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587
Isoform_157290_4	chr6	+	3845	14	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-431	intron_retention	FALSE	canonical	3	32	junction_7	51.8881363919042	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9770	False	NA	8	True	ATTAAA	-21	NA	86381289	86409778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157291_6	chr6	+	3227	14	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-2	intron_retention	FALSE	canonical	3	32	junction_7	51.8881363919042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9770	False	NA	15	True	AATAAA	-17	NA	86381289	86409160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157297_31	chr6	+	3779	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	89	609	4	-431	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9770	False	NA	8	True	ATTAAA	-21	NA	86381289	86409778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157299_5	chr6	+	3622	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	59	796	-4	424	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTCATCCTGGTATA	9740	False	NA	NA	False	AATAAA	-25	NA	86381259	86409591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_1573_11	chr10	-	6480	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	8	-2673	8	-3	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTGTCTGTTCTCTTA	NA	False	NA	-4	True	ATTAAA	-13	NA	7423630	7390364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
Isoform_157301_13	chr6	+	4418	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-1	intron_retention	FALSE	canonical	3	32	junction_6	51.9548415025545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTTCTTTGTAAACT	9770	False	NA	16	True	AATAAA	-18	NA	86381289	86409161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157302_8	chr6	+	5052	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	1	-430	intron_retention	FALSE	canonical	3	32	junction_6	51.9548415025545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	9754	False	NA	9	True	ATTAAA	-22	NA	86381273	86409779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157303_4	chr6	+	4551	13	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	4	-1	intron_retention	FALSE	canonical	3	27	junction_8	60.6416500618364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTTCTTTGTAAACT	9770	False	NA	16	True	AATAAA	-18	NA	86381289	86409161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157305_3	chr6	+	4967	12	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-433	intron_retention	FALSE	canonical	3	93	junction_5	32.626866179488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGGGGTCTTCTTG	9770	False	NA	6	True	ATTAAA	-19	NA	86381289	86409776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157306_31	chr6	+	3129	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	-6	7	3	-2	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9769	False	NA	15	True	AATAAA	-17	NA	86381288	86409160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157310_6	chr6	+	4584	12	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	4	-3	intron_retention	FALSE	canonical	3	32	junction_5	54.2339590482715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTATTTCTTTGTAAA	9770	False	NA	14	True	AATAAA	-16	NA	86381289	86409159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157311_3	chr6	+	4717	12	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	3	-4	intron_retention	FALSE	canonical	3	27	junction_7	63.1136977444295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTTATTTCTTTGTAA	9769	False	NA	13	True	AATAAA	-15	NA	86381288	86409158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157312_4	chr6	+	5273	11	FSM	ENSMUSG00000071337.12	ENSMUST00000134142.8	3856	11	-11	-1406	2	-2	multi-exon	FALSE	canonical	3	50	junction_4	43.462742665414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9755	False	NA	15	True	AATAAA	-17	NA	86381274	86409160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_157313_8	chr6	+	2502	10	NIC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	9.97156450941537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGCCATTGATGTCA	1478	False	NA	NA	False	AATAAA	-23	NA	86415380	86447367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86415466_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
Isoform_157314_3	chr6	+	2563	11	NIC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	8	-2	combination_of_known_junctions	TRUE	canonical	2	4	junction_7	10.3058235963944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGCCATTGATGTCAT	1476	False	NA	NA	False	AATAAA	-24	NA	86415378	86447368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86415470_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86434797_86434906_86439562_86439664_86442782_86442946_86446727
Isoform_157315_20	chr6	+	2484	10	FSM	ENSMUSG00000046679.17	ENSMUST00000050497.14	2534	10	48	2	33	-2	multi-exon	FALSE	canonical	3	15	junction_1	6.73483664919633	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGCCATTGATGTCAT	1501	False	NA	NA	False	AATAAA	-24	NA	86415403	86447368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86415470_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
Isoform_157318_24	chr6	+	2570	10	NIC	ENSMUSG00000046679.17	novel	2630	11	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	6.89784364229722	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGCCATTGATGTCAT	1775	False	NA	NA	False	AATAAA	-24	NA	86415677	86447368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86415830_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
Isoform_157319_6	chr6	+	510	2	NNC	ENSMUSG00000046679.17	novel	505	2	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTCGGGTCTCAAAT	1781	False	NA	NA	False	ATTAAA	-4	NA	86415683	86416473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_86415830_86416109
Isoform_157320_7	chr6	+	2979	10	NIC	ENSMUSG00000046679.17	novel	2922	10	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9.7182531580755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGCCATTGATGTCA	1776	False	NA	NA	False	AATAAA	-23	NA	86415678	86447367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86416241_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
Isoform_157322_5	chr6	+	476	4	NIC	ENSMUSG00000097048.8	novel	594	5	NA	NA	-5	-7	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	40.4337592722825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACAGCTGTGTATTTT	NA	False	NA	1	True	NA	NA	NA	86504295	86541423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86504416_86504872_86504957_86540413_86540520_86541257
Isoform_157323_4	chr6	+	625	5	NNC	ENSMUSG00000097048.8	novel	594	5	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	37.6231311828242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86504300	86541424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_86504416_86504872_86504957_86509136_86509290_86540413_86540520_86541257
Isoform_157324_17	chr6	+	2059	4	FSM	ENSMUSG00000097048.8	ENSMUST00000180896.8	2099	4	34	6	34	-5	multi-exon	FALSE	canonical	3	81	junction_1	16.5126214353344	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGTGTATTTTTA	NA	False	NA	3	True	NA	NA	NA	86503286	86541425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86504957_86509174_86509290_86540413_86540520_86541257
Isoform_157327_26	chr6	+	1720	4	FSM	ENSMUSG00000097048.8	ENSMUST00000180896.8	2099	4	372	7	-167	-6	multi-exon	FALSE	canonical	3	81	junction_1	16.5126214353344	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86503624	86541424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86504957_86509174_86509290_86540413_86540520_86541257
Isoform_157329_13	chr6	+	2117	4	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	14	-5	intron_retention	FALSE	canonical	3	38	junction_1	36.6454484061648	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGTGTATTTTTA	NA	False	NA	3	True	NA	NA	NA	86503266	86541425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_86504957_86509136_86509290_86540413_86540520_86541257
Isoform_157330_20	chr6	+	1757	4	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	-165	-5	intron_retention	FALSE	canonical	3	38	junction_1	36.6454484061648	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGTGTATTTTTA	NA	False	NA	3	True	NA	NA	NA	86503626	86541425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_86504957_86509136_86509290_86540413_86540520_86541257
Isoform_157331_4	chr6	+	5174	18	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	3	673	combination_of_known_splicesites	FALSE	canonical	2	7	junction_16	9.86903865001209	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTGGTCAGTTGTC	NA	False	NA	10	True	AGTAAA	-11	NA	86826501	86975277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86972821
Isoform_157332_8	chr6	+	5096	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-22	672	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	8.0156097709407	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTTGGTCAGTTGT	NA	False	NA	9	True	AGTAAA	-10	NA	86826476	86975276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
Isoform_157333_3	chr6	+	10035	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-29	3	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	8.0156097709407	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGTTGTGTGTTTTTTC	NA	False	NA	8	True	ATTAAA	-18	NA	86826469	86980208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
Isoform_157334_3	chr6	+	9982	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	14	junction_16	7.67885692990825	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTTAGTTGTGTGTTT	NA	False	NA	4	True	ATTAAA	-14	NA	86826515	86980204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86972821
Isoform_157336_153	chr6	+	1190	9	NIC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	210	junction_1	876.96265598941	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986215	87005439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_15734_93	chr11	-	1968	13	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	109	360	5	30	intron_retention	FALSE	canonical	3	982	junction_6	81.183776430735	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCCTGCTTGAAGTT	NA	False	NA	-11	True	AATAAA	-45	NA	96807213	96798611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
Isoform_157342_1238	chr6	+	894	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	54	2	1	-2	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986871	87005439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_157343_40	chr6	+	1549	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	-602	3	-2	2	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986215	87005438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_15735_122	chr11	-	1937	13	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	110	390	6	0	intron_retention	FALSE	canonical	3	982	junction_6	81.183776430735	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807212	96798641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
Isoform_157350_129	chr6	+	898	8	FSM	ENSMUSG00000029993.17	ENSMUST00000032060.15	948	8	53	-3	0	-2	multi-exon	FALSE	canonical	0	0	junction_5	1005.23440255576	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986870	87005439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
Isoform_157352_20	chr6	+	3427	8	NNC	ENSMUSG00000029993.17	novel	950	8	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_2	968.221702558935	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986871	87005438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_86986942_86989888_86990952_86990975_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_157362_121	chr6	+	6233	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	5	0	1	0	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9950	False	NA	14	True	AATAAA	-15	NA	87019832	87069179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
Isoform_157367_2837	chr6	+	2973	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	114	1053	0	12	multi-exon	FALSE	canonical	0	0	junction_2	198.307183759023	2837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACCGTCTCATCCCTA	NA	False	NA	13	True	AATAAA	-33	NA	87864909	87889524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
Isoform_157368_722	chr6	+	4014	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	120	6	6	-6	multi-exon	FALSE	canonical	0	0	junction_2	198.307183759023	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGGTGTCAGCCTC	NA	False	NA	NA	False	AATAAA	-9	NA	87864915	87890571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
Isoform_15737_245	chr11	-	1924	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	-14	340	-14	50	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTGCACATGTTTTC	NA	False	NA	-9	True	NA	NA	NA	96807336	96798591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
Isoform_157371_41	chr6	+	3039	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	33	1068	33	-3	multi-exon	TRUE	canonical	0	0	junction_2	198.307183759023	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864828	87889509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
Isoform_15738_620	chr11	-	1829	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	83	338	1	52	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGCACATGTTTTCTT	NA	False	NA	-7	True	NA	NA	NA	96807239	96798589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
Isoform_15739_645	chr11	-	1777	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	83	390	1	0	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807239	96798641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
Isoform_157400_1138	chr6	+	1387	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	57	20	13	-20	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	3021	False	NA	24	True	AATAAA	-10	NA	87890973	87913591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
Isoform_157401_229	chr6	+	1447	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	-3	20	-3	-20	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	2961	False	NA	24	True	AATAAA	-10	NA	87890913	87913591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
Isoform_15741_274	chr11	-	1887	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	-27	390	-27	0	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807349	96798641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
Isoform_157412_6770	chr6	+	2263	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	32	1338	32	579	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	6770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCTGTACTGAAAAATC	569	False	NA	16	True	AATAAA	-22	NA	88061495	88080948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
Isoform_157414_374	chr6	+	2295	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	-2	1340	-2	577	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTGCTGTACTGAAAAA	535	False	NA	14	True	AATAAA	-20	NA	88061461	88080946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
Isoform_15742_40	chr11	-	2165	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	83	2	1	-2	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGTCACCTTTACTGG	NA	False	NA	-15	True	GATAAA	-14	NA	96807239	96798253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
Isoform_157433_17	chr6	+	3300	6	FSM	ENSMUSG00000015053.15	ENSMUST00000170089.8	3135	6	-169	4	-169	-2	multi-exon	FALSE	canonical	3	10	junction_1	57.164324538999	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCTGTCGCCTGTTGA	NA	False	NA	10	True	AATAAA	-11	NA	88170703	88184010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_88170983_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
Isoform_157437_481	chr6	+	2704	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	334	533	334	-533	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCACAGTCCTTTGAGTG	NA	False	NA	16	True	AATAAA	-24	NA	88175649	88183479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
Isoform_157438_336	chr6	+	3237	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	335	-1	335	1	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTCGCCTGTTGAGTG	NA	False	NA	13	True	AATAAA	-14	NA	88175650	88184013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
Isoform_157451_1315	chr6	+	1654	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	15	6	15	-6	multi-exon	FALSE	canonical	3	1160	junction_1	83.5499850388975	1315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGTAGGTTTTTATA	NA	False	NA	25	True	AATAAA	-25	NA	88442405	88474548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
Isoform_157463_6	chr6	+	3571	8	FSM	ENSMUSG00000033174.18	ENSMUST00000113585.9	3676	8	105	0	23	0	multi-exon	FALSE	canonical	2	10	junction_6	2.55550625999976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTGTCTGCGTGTCTG	NA	False	NA	5	True	AATAAA	-20	NA	88701498	88805342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_88701554_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
Isoform_157465_3	chr6	+	4031	8	FSM	ENSMUSG00000033174.18	ENSMUST00000163271.8	3991	8	-42	2	-42	-2	multi-exon	FALSE	canonical	2	4	junction_1	4.18939379960434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCCTGTGTCTGCGTGTC	NA	False	NA	3	True	AATAAA	-18	NA	88701643	88805340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_88702161_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
Isoform_157466_57	chr6	+	1762	12	FSM	ENSMUSG00000002871.15	ENSMUST00000204765.3	1738	12	-24	0	-8	0	multi-exon	FALSE	canonical	3	57	junction_1	17.59319928714	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTGAGCTGATGCCT	NA	False	NA	12	True	AATAAA	-14	NA	88879290	88889213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
Isoform_157468_4	chr6	+	1829	11	NIC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	8	-14	intron_retention	TRUE	canonical	3	57	junction_1	18.4325798519903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAGAGTAGTAGGT	NA	False	NA	-2	True	NA	NA	NA	88879288	88889199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887384_88887529_88887633_88887778_88887860_88888664
Isoform_157469_190	chr6	+	2759	16	FSM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	-9	86	-9	-86	multi-exon	FALSE	canonical	3	51	junction_10	10.7467824642231	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTGATCTAATTCGT	NA	False	NA	5	True	ATTAAA	-16	NA	89620960	89652425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
Isoform_157472_25	chr6	+	2454	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	110	2300	-6	-319	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTTTTGAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	90346583	90359766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
Isoform_157473_13	chr6	+	2876	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	10	1978	8	3	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAGAGTCTGACTTTCC	NA	False	NA	NA	False	NA	NA	NA	90346483	90360088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
Isoform_157476_9	chr6	+	2967	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	93	1804	-23	177	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACTGGAGCCGACTTGC	NA	False	NA	NA	False	NA	NA	NA	90346566	90360262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
Isoform_157479_22	chr6	+	2761	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	117	1986	1	-5	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCCTAGAGAGAGTCT	NA	False	NA	NA	False	NA	NA	NA	90346590	90360080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
Isoform_157480_7	chr6	+	4775	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	82	7	-34	-7	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAATGTACTACATGCA	NA	False	NA	NA	False	AATAAA	-21	NA	90346555	90362059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
Isoform_157482_90	chr6	+	4008	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	115	3	1	-3	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCGCTGCTTTC	NA	False	NA	9	True	AATAAA	-22	NA	90346590	90380469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
Isoform_157483_25	chr6	+	4093	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	30	3	30	-3	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCGCTGCTTTC	NA	False	NA	9	True	AATAAA	-22	NA	90346505	90380469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
Isoform_157486_12	chr6	+	4067	11	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	37.2210961687052	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCGCTGCTTTC	NA	False	NA	9	True	AATAAA	-22	NA	90346585	90380469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90376053_90376108_90377763_90377866_90379001
Isoform_157487_6	chr6	+	4150	11	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	37.2210961687052	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCGCTGCTTTCATT	NA	False	NA	12	True	AATAAA	-25	NA	90346505	90380472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90376053_90376108_90377763_90377866_90379001
Isoform_157490_1541	chr6	+	2325	3	FSM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	23	25	23	-8	multi-exon	FALSE	canonical	3	353	junction_2	6.5	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAGGAAAAAAAAAAAG	NA	False	NA	3	True	CATAAA	-23	NA	90439580	90452195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90439708_90443401_90444506_90451101
Isoform_157491_67	chr6	+	2383	3	FSM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	-26	16	-26	1	multi-exon	FALSE	canonical	3	353	junction_2	6.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAACTCTACC	NA	False	NA	12	True	AATAAA	-8	NA	90439531	90452204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90439708_90443401_90444506_90451101
Isoform_1575_8	chr10	-	5910	4	NIC	ENSMUSG00000079685.11	novel	5959	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	26.1576417557513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTTCTCTTACTT	NA	False	NA	-1	True	ATTAAA	-16	NA	7423588	7390361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_7395698_7396417_7396553_7397380_7397485_7423253
Isoform_157500_10	chr6	+	3103	23	Fusion	ENSMUSG00000108111.2_ENSMUSG00000030088.16	novel	653	5	NA	NA	-10	4	multi-exon	FALSE	canonical	0	0	junction_1	47.2324128797829	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACACTTTGTGTCACTG	739	False	NA	8	True	AATAAA	-18	NA	90463364	90576146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr6_+_90463514_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
Isoform_157501_553	chr6	+	3051	23	FSM	ENSMUSG00000030088.16	ENSMUST00000032175.11	3052	23	-4	5	-4	4	multi-exon	FALSE	canonical	3	110	junction_1	30.2788691558217	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACACTTTGTGTCACTG	NA	False	NA	8	True	AATAAA	-18	NA	90527782	90576146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
Isoform_157504_214	chr6	+	3120	23	FSM	ENSMUSG00000030088.16	ENSMUST00000130418.8	4175	23	23	1032	7	2	multi-exon	FALSE	canonical	3	47	junction_1	39.2549675753126	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCACTGCTCTGTC	NA	False	NA	15	True	AATAAA	-25	NA	90527793	90576153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
Isoform_157514_18	chr6	+	1709	12	ISM	ENSMUSG00000030088.16	ENSMUST00000204796.3	3025	23	20904	-11	4046	2	3prime_fragment	FALSE	canonical	3	182	junction_2	18.1799999090818	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCACTGCTCTGTC	7923	False	NA	15	True	AATAAA	-25	NA	90548733	90576153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
Isoform_157518_15	chr6	+	2234	12	NNC	ENSMUSG00000030089.16	novel	2412	11	NA	NA	150	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	18.656087123962	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAACTCGGTGTCCTCCA	NA	False	NA	NA	False	AATAAA	-11	NA	90581856	90623388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550_90623032_90623053
Isoform_157519_19	chr6	+	2190	12	NNC	ENSMUSG00000030089.16	novel	2412	11	NA	NA	192	-6	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_2	19.2044244213507	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAACTCGGTGTCCTCCA	NA	False	NA	NA	False	AATAAA	-11	NA	90581898	90623388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550_90623030_90623053
Isoform_157520_4	chr6	+	2393	12	NNC	ENSMUSG00000030089.16	novel	2412	11	NA	NA	-9	-6	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_2	18.656087123962	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAACTCGGTGTCCTCCA	9915	False	NA	NA	False	AATAAA	-11	NA	90581697	90623388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550_90623032_90623053
Isoform_157521_4	chr6	+	2142	11	NNC	ENSMUSG00000030089.16	novel	2412	11	NA	NA	195	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	19.8333053221091	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAACTCGGTGTCCTCCA	NA	False	NA	NA	False	AATAAA	-11	NA	90581901	90623388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_90581991_90588860_90589095_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
Isoform_157522_41	chr6	+	1412	7	NNC	ENSMUSG00000030089.16	novel	2324	10	NA	NA	16168	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_6	13.490737563232	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGGTGTCCTCCATCCTT	2820	False	NA	NA	False	AATAAA	-16	NA	90612296	90623393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550_90623032_90623053
Isoform_157523_34	chr6	+	2518	10	FSM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	131	4	-22	-4	multi-exon	FALSE	canonical	3	7	junction_9	4.60541817245838	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGGCAGCTGCCCA	NA	False	NA	25	True	AATAAA	-27	NA	91133777	91151670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91133830_91134378_91134528_91136142_91136244_91142542_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
Isoform_157524_24	chr6	+	2594	10	FSM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	58	1	58	-1	multi-exon	FALSE	canonical	3	7	junction_9	4.60541817245838	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGGCAGCTGCCCAAGA	NA	False	NA	28	True	AATAAA	-30	NA	91133704	91151673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91133830_91134378_91134528_91136142_91136244_91142542_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
Isoform_157525_31	chr6	+	4307	17	FSM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	338	-1	-29	0	multi-exon	FALSE	canonical	2	6	junction_1	5.3370755100523	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTCTTTGACTTCTT	NA	False	NA	NA	False	ATTAAA	-27	NA	91189774	91249522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
Isoform_157527_6	chr6	+	2999	15	ISM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	38307	6	-5239	-6	3prime_fragment	FALSE	canonical	3	11	junction_5	4.6246897303539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTATTCAGTCTCTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	91227743	91249515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
Isoform_157528_6	chr6	+	473	2	FSM	ENSMUSG00000100680.2	ENSMUST00000186472.2	486	2	13	0	13	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCTACACTCATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	91417981	91418737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91418141_91418423
Isoform_157529_467	chr6	+	2895	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	4	4	4	-4	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCAGTCGTTTGCTGT	9692	False	NA	NA	False	AATAAA	-26	NA	91450688	91465441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
Isoform_157538_846	chr6	+	635	4	FSM	ENSMUSG00000034192.6	ENSMUST00000206947.2	618	4	-12	-5	-11	0	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91493017	91499607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
Isoform_157539_68	chr6	+	691	4	FSM	ENSMUSG00000034192.6	ENSMUST00000040607.6	743	4	49	3	0	2	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTTTTTAATGTG	NA	False	NA	44	True	ATTAAA	-20	NA	91492958	91499604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
Isoform_157555_341	chr6	+	6130	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	52	4	10	-4	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGTCTGGTGTGTTTCG	NA	False	NA	27	True	AATAAA	-21	NA	91661085	91736043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
Isoform_157556_138	chr6	+	6161	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	20	5	4	-5	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	NA	False	NA	26	True	AATAAA	-20	NA	91661053	91736042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
Isoform_157585_4	chr6	+	2141	3	FSM	ENSMUSG00000034083.17	ENSMUST00000138868.8	3980	3	14	1825	-5	-1825	multi-exon	FALSE	canonical	3	200	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAATAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	91855047	91860143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91855168_91857237_91857343_91858227
Isoform_157591_97	chr6	+	1484	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	17	251	-2	-251	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGCTGGTTGTATTT	NA	False	NA	8	True	TATAAA	-18	NA	91855050	91876573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
Isoform_157592_61	chr6	+	1738	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	17	-3	-2	3	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAACTTGTTTCTTTTT	NA	False	NA	15	True	TATAAA	-19	NA	91855050	91876827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
Isoform_157593_6	chr6	+	6060	21	FSM	ENSMUSG00000034037.15	ENSMUST00000089334.9	6095	21	32	3	32	-3	multi-exon	FALSE	canonical	0	0	junction_5	1.67032930884901	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTTTACTTGTAGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	91955890	92052982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_91956024_91963781_91966447_92001484_92001615_92015005_92015065_92015167_92015199_92026986_92027148_92027370_92027531_92028060_92028149_92030207_92030259_92030791_92030851_92038784_92038857_92039816_92039886_92042128_92042213_92043163_92043244_92044482_92044583_92044865_92045004_92045428_92045559_92046348_92046483_92048292_92048422_92051078_92051234_92051550
Isoform_157594_11	chr6	+	7709	16	NIC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	21	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	9.13503633757901	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	12	True	ATTAAA	-14	NA	92068391	92150037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_92068724_92082262_92082347_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
Isoform_157595_26	chr6	+	7626	15	FSM	ENSMUSG00000005893.15	ENSMUST00000113460.8	7647	15	21	0	21	0	multi-exon	FALSE	canonical	3	17	junction_1	9.34732309164457	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTGCTGCTCATCT	NA	False	NA	13	True	ATTAAA	-15	NA	92068391	92150038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
Isoform_157596_4	chr6	+	7694	16	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	15.9368197022562	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	12	True	ATTAAA	-14	NA	92068396	92150037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92129910_92129985_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
Isoform_157597_23	chr6	+	1901	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	0	21	0	-21	multi-exon	FALSE	canonical	3	22	junction_5	7.6610285226392	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAATACTTCCTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	94477311	94581632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
Isoform_1576_111	chr10	-	2477	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	15	-1	15	1	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGTCTGGATCCTTG	NA	False	NA	-7	True	AATAAA	-13	NA	7539052	7505143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
Isoform_157604_7	chr6	+	1856	9	NIC	ENSMUSG00000045100.12	novel	1922	10	NA	NA	0	-21	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	12.2983738762488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAATACTTCCTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	94477311	94581632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94569392_94569463_94575360_94575426_94576159_94576234_94580532
Isoform_157605_55	chr6	+	4621	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	179	69	39	-69	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCTCATGTCATGTAG	NA	False	NA	21	True	ATTAAA	-18	NA	95094899	95106702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
Isoform_157607_73	chr6	+	4553	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	179	137	39	-137	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCCAGTGTTGTAAAC	NA	False	NA	6	True	AATAAA	-16	NA	95094899	95106634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
Isoform_157608_23	chr6	+	4652	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	150	67	10	-67	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCTCATGTCATGTAGAA	NA	False	NA	23	True	ATTAAA	-20	NA	95094870	95106704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
Isoform_157609_5	chr6	+	4694	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	176	-1	36	1	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAGTTAGTATTAACAA	NA	False	NA	91	True	ATTAAA	-24	NA	95094896	95106772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
Isoform_157610_3	chr6	+	4368	3	FSM	ENSMUSG00000030031.15	ENSMUST00000119582.3	4518	3	10	140	10	-140	multi-exon	FALSE	canonical	2	6	junction_1	31	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTGCCAGTGTTGTA	NA	False	NA	3	True	AATAAA	-13	NA	95094870	95106631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_95094956_95098719_95099829_95103457
Isoform_157613_4	chr6	+	5095	3	NIC	ENSMUSG00000030031.15	novel	4869	4	NA	NA	42	-140	intron_retention	FALSE	canonical	3	68	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTGCCAGTGTTGTA	NA	False	NA	3	True	AATAAA	-13	NA	95094902	95106631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_95095715_95098719_95099829_95103457
Isoform_157614_5	chr6	+	2451	2	ISM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	105	1531	105	-1531	5prime_fragment	FALSE	canonical	3	381	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACCAAGAATGCAAAAAAAA	8553	False	NA	NA	False	NA	NA	NA	97187754	97208745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_97187958_97206497
Isoform_157615_355	chr6	+	1334	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	108	0	108	0	multi-exon	FALSE	canonical	3	281	junction_2	50	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTATATGGCACAT	8556	False	NA	10	True	AATAAA	-21	NA	97187757	97210276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_97187958_97206497_97206716_97209360
Isoform_157616_108	chr6	+	1391	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	108	-57	108	57	multi-exon	FALSE	canonical	3	281	junction_2	50	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATATTTGAATGGTTTAG	8556	False	NA	67	True	AATAAA	-16	NA	97187757	97210333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_97187958_97206497_97206716_97209360
Isoform_157618_6	chr6	+	4895	10	FSM	ENSMUSG00000035158.16	ENSMUST00000043637.14	4881	10	-13	-1	-7	1	multi-exon	FALSE	canonical	3	14	junction_1	22.5738841787048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTGACCAGTTGTGT	NA	False	NA	6	True	ATTAAA	-17	NA	97784005	97998311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_97784249_97918013_97918264_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
Isoform_157622_490	chr6	+	2923	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	24	1927	24	385	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGGAGTACATTTTT	9684	False	NA	20	True	AATAAA	-14	NA	100810606	100844968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
Isoform_157629_72	chr6	+	4847	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	27	0	27	0	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTGTGGAATTACTTT	9687	False	NA	12	True	AATAAA	-21	NA	100810609	100846895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
Isoform_157632_74	chr6	+	3439	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	27	1408	27	904	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTTGATAGTCTTTAT	9687	False	NA	20	True	AATAAA	-20	NA	100810609	100845487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
Isoform_157652_161	chr6	+	2226	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	-10	-818	-10	-2	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	10	True	AATAAA	-19	NA	106746116	106759433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
Isoform_157660_29	chr6	+	4436	8	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	24	2	20	-2	intron_retention	FALSE	canonical	3	574	junction_1	134.183243578112	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	10	True	AATAAA	-19	NA	106746150	106759433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
Isoform_157661_669	chr6	+	2253	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	25	5	21	-5	multi-exon	FALSE	canonical	3	574	junction_1	132.149477392081	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTCTTTGTCGTTATT	NA	False	NA	7	True	AATAAA	-16	NA	106746151	106759430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
Isoform_157674_22	chr6	+	1623	2	FSM	ENSMUSG00000034639.8	ENSMUST00000049246.7	1612	2	-6	-5	-6	5	multi-exon	FALSE	canonical	1	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGATCTTATTACTTGT	NA	False	NA	11	True	AATAAA	-21	NA	108041999	108054088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_108042201_108052666
Isoform_157675_4	chr6	+	847	4	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	3	309438	3	-136132	5prime_fragment	FALSE	canonical	3	46	junction_3	9.67241208569794	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108190059	108218632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224
Isoform_157679_16	chr6	+	9749	59	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	0	combination_of_known_junctions	TRUE	non_canonical	0	0	junction_26	14.5585047121273	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108190057	108528070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
Isoform_157681_6	chr6	+	9777	59	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	15.3465709974349	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGACTGGCTGGTGGC	NA	False	NA	5	True	AATAAA	-16	NA	108190057	108528071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
Isoform_157687_374	chr6	+	2936	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	24	153	24	-153	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAATGGTCTCCTTGGT	NA	False	NA	9	True	AATAAA	-21	NA	108637613	108643733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
Isoform_157689_23	chr6	+	3153	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	-188	148	-188	-148	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCTCCTTGGTTTTAA	NA	False	NA	14	True	AATAAA	-26	NA	108637401	108643738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
Isoform_157704_589	chr6	+	2710	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	9	1724	9	-1724	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTTACCTTAAAATGTA	NA	False	NA	25	True	AATAAA	-25	NA	108760068	108800515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
Isoform_157706_266	chr6	+	2920	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-34	1557	-34	-1557	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTATCATGGTCCCC	NA	False	NA	14	True	AATAAA	-18	NA	108760025	108800682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
Isoform_157708_18	chr6	+	4490	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-48	1	-48	-1	multi-exon	TRUE	canonical	3	458	junction_6	33.5480583972042	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATGCCTCCTGTGTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	108760011	108802238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
Isoform_15771_270	chr11	-	2015	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	-25	4	-25	-4	multi-exon	FALSE	canonical	3	181	junction_4	10.434983894999	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATGTTTAACTTGATT	NA	False	NA	-6	True	AATAAA	-21	NA	96834837	96828654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
Isoform_157714_24	chr6	+	4024	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	2	417	2	-417	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTGCTTTAGTGTAC	NA	False	NA	4	True	AGTAAA	-15	NA	108760061	108801822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
Isoform_157722_196	chr6	+	5933	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-109	-7	-76	-1	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTCTCCTTTGCAT	NA	False	NA	17	True	ATTAAA	-22	NA	108805525	108836316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
Isoform_157724_23	chr6	+	6029	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-204	-8	-171	0	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	18	True	ATTAAA	-23	NA	108805430	108836317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
Isoform_157736_3	chr6	+	1676	6	FSM	ENSMUSG00000057604.10	ENSMUST00000032376.6	1730	6	52	2	52	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.67332005306815	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACACTTTTATCTCGTT	NA	False	NA	NA	False	AATAAA	-23	NA	112250770	112307384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_112250934_112282009_112282099_112287446_112287703_112292536_112292873_112305623_112305840_112306768
Isoform_157740_577	chr6	+	2053	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	110	0	8	0	multi-exon	TRUE	canonical	3	600	junction_1	54.2445309298778	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023295	113045234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
Isoform_157746_36	chr6	+	2095	10	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	204.840377481867	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023322	113045234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
Isoform_157748_36	chr6	+	2035	10	NIC	ENSMUSG00000030264.15	novel	855	4	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	204.840377481867	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023382	113045234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
Isoform_157752_3	chr6	+	2278	4	FSM	ENSMUSG00000034269.13	ENSMUST00000136128.8	839	4	-200	-1239	-4	-3	multi-exon	FALSE	canonical	1	2	junction_3	41.8170619085878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATACTTTTTTGTGTGGTT	7839	False	NA	NA	False	AATAAA	-13	NA	113054321	113084519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113054674_113081895_113082083_113082625_113082723_113082877
Isoform_157754_5	chr6	+	1287	3	FSM	ENSMUSG00000034269.13	ENSMUST00000143998.8	2180	3	6	887	6	355	multi-exon	FALSE	canonical	3	52	junction_2	21	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCTGTGTTATTGGATA	7849	False	NA	NA	False	AATAAA	-11	NA	113054331	113083635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113054674_113081895_113082083_113082877
Isoform_157757_3	chr6	+	7008	24	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	23.2069672088392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAATGTTAACAATGTG	7849	False	NA	16	True	NA	NA	NA	113054331	113130389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
Isoform_157759_3	chr6	+	4331	9	ISM	ENSMUSG00000034269.13	ENSMUST00000149584.8	5023	19	11149	-1595	-4335	-5	3prime_fragment	FALSE	canonical	3	33	junction_7	24.8935232540514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGTTAACAATGTGTT	NA	False	NA	18	True	NA	NA	NA	113097974	113130391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
Isoform_157762_4	chr6	+	3154	5	ISM	ENSMUSG00000034269.13	ENSMUST00000150107.2	3029	7	16277	-1579	15345	0	3prime_fragment	FALSE	canonical	3	33	junction_3	25.9169346181218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAACAATGTGTTTGTTC	3	True	NA	23	True	NA	NA	NA	113120986	113130396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
Isoform_157763_3	chr6	+	3535	5	ISM	ENSMUSG00000034269.13	ENSMUST00000150107.2	3029	7	15891	-1574	14959	-5	3prime_fragment	FALSE	canonical	3	33	junction_3	25.9169346181218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGTTAACAATGTGTT	NA	False	NA	18	True	NA	NA	NA	113120600	113130391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
Isoform_157764_8	chr6	+	2701	3	ISM	ENSMUSG00000034269.13	ENSMUST00000150107.2	3029	7	21892	-1569	20960	1	3prime_fragment	FALSE	canonical	3	33	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATCATAATGTTAACAAT	2263	False	NA	13	True	NA	NA	NA	113126601	113130386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_113126650_113127062_113127152_113127822
Isoform_157771_1485	chr6	+	2468	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	18	190	10	6	multi-exon	FALSE	canonical	3	298	junction_17	28.028204489649	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGCATTTCATCC	1986	False	NA	19	True	AATAAA	-20	NA	113214821	113258163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
Isoform_157772_36	chr6	+	2654	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	18	4	10	1	multi-exon	FALSE	canonical	3	298	junction_17	28.028204489649	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAATTCTCAGTCCCCA	1986	False	NA	NA	False	NA	NA	NA	113214821	113258349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
Isoform_157773_74	chr6	+	2420	19	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	10	-1	combination_of_known_junctions	TRUE	canonical	3	24	junction_17	81.7724183026387	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCTTTTCATTAGCAT	1986	False	NA	12	True	AATAAA	-13	NA	113214821	113258156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254791_113254907_113257563
Isoform_157774_221	chr6	+	2306	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_17	76.4492277859348	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTTTCATTAGCATTT	1987	False	NA	14	True	AATAAA	-15	NA	113214822	113258158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
Isoform_157779_81	chr6	+	2316	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	10	3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	88.3270111554443	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTTCATTAGCATTTCA	1986	False	NA	16	True	AATAAA	-17	NA	113214821	113258160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113215083_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
Isoform_157784_5	chr6	+	1803	16	NIC	ENSMUSG00000030270.12	novel	2777	21	NA	NA	1383	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	5.73643327047972	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTCTCATGGGTGTT	NA	False	NA	4	True	AATAAA	-15	NA	113260708	113281788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113260944_113261345_113261423_113266945_113267010_113267127_113267232_113267365_113267471_113268998_113269041_113269326_113269403_113269482_113269537_113269963_113270026_113270669_113270717_113271572_113271755_113271986_113272115_113277523_113277627_113278600_113278659_113279009_113279084_113281396
Isoform_157785_8	chr6	+	4481	14	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	51.0992768507985	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	298	False	NA	28	True	AATAAA	-16	NA	113284163	113301821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
Isoform_157786_38	chr6	+	4478	14	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	39.0967545074748	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	298	False	NA	28	True	AATAAA	-16	NA	113284163	113301821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
Isoform_157788_11	chr6	+	4611	13	FSM	ENSMUSG00000001632.17	ENSMUST00000113117.4	4540	13	-52	-19	6	0	multi-exon	FALSE	canonical	3	53	junction_1	40.0779622181013	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	267	False	NA	28	True	AATAAA	-16	NA	113284132	113301821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
Isoform_157790_19	chr6	+	4499	14	NIC	ENSMUSG00000001632.17	novel	4381	14	NA	NA	11	3	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	49.1722007382605	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGCCTTCTACTAGGA	298	False	NA	31	True	AATAAA	-19	NA	113284163	113301824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
Isoform_157792_5	chr6	+	4588	13	NIC	ENSMUSG00000001632.17	novel	4540	13	NA	NA	11	-7	intron_retention	FALSE	canonical	3	36	junction_6	50.9032306331228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAATTCTTTCTTCTTG	298	False	NA	18	True	AATAAA	-6	NA	113284163	113301811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
Isoform_157793_22	chr6	+	4690	14	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	11	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	44.7021702344376	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	298	False	NA	5	True	AATATA	-12	NA	113284163	113301798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
Isoform_157794_4	chr6	+	4609	14	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	44.7021702344376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAGAATGGAGC	264	False	NA	NA	False	NA	NA	NA	113284129	113301683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
Isoform_157795_6	chr6	+	4796	13	FSM	ENSMUSG00000001632.17	ENSMUST00000113119.8	4826	13	8	22	8	-3	multi-exon	FALSE	canonical	3	30	junction_7	46.1317557533733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGTCTATTTAGAAT	295	False	NA	6	True	AATATA	-13	NA	113284160	113301799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
Isoform_157796_77	chr6	+	4704	14	FSM	ENSMUSG00000001632.17	ENSMUST00000113122.8	4773	14	66	3	11	-3	multi-exon	FALSE	canonical	3	111	junction_6	28.9253272447006	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCTTTCTTCTTGCCTT	298	False	NA	22	True	AATAAA	-10	NA	113284163	113301815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
Isoform_157799_31	chr6	+	4815	13	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	11	3	intron_retention	FALSE	canonical	3	111	junction_6	28.8800200061488	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGCCTTCTACTAGGA	298	False	NA	31	True	AATAAA	-19	NA	113284163	113301824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
Isoform_157801_16	chr6	+	4597	14	FSM	ENSMUSG00000001632.17	ENSMUST00000204626.3	4381	14	-111	-105	10	4	multi-exon	FALSE	canonical	3	36	junction_6	42.213040975537	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAATGGAGCTTGTCT	297	False	NA	NA	False	NA	NA	NA	113284162	113301689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
Isoform_157803_10	chr6	+	4806	13	FSM	ENSMUSG00000001632.17	ENSMUST00000203577.2	4468	13	-226	-112	11	-5	multi-exon	FALSE	canonical	3	36	junction_6	43.4117079701881	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAAAGTCTATTTAGA	298	False	NA	4	True	AATATA	-11	NA	113284163	113301797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
Isoform_157807_9	chr6	+	1382	7	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	89.2070002235749	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGCAGTGAAGAGTGAGA	2339	False	NA	11	True	AATAAA	-20	NA	113303963	113311146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113304324_113305325_113305441_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_157808_28	chr6	+	1596	7	FSM	ENSMUSG00000030271.15	ENSMUST00000136263.4	1601	7	5	0	-4	0	multi-exon	FALSE	canonical	3	33	junction_2	81.0445693567572	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2340	False	NA	10	True	AATAAA	-19	NA	113303964	113311145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_157809_118	chr6	+	1516	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	28	5	1	-1	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACGCAGTGAAGAGTGA	2336	False	NA	9	True	AATAAA	-18	NA	113303960	113311144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_157810_63	chr6	+	1544	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	1	4	1	0	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2309	False	NA	10	True	AATAAA	-19	NA	113303933	113311145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_157811_9	chr6	+	2193	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	32	-676	-4	-204	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGGCAGCACTTTCAT	2340	False	NA	NA	False	NA	NA	NA	113303964	113311825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_157813_5	chr6	+	1634	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	-88	3	-88	1	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGCAGTGAAGAGTGAGA	2220	False	NA	11	True	AATAAA	-20	NA	113303844	113311146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_157815_6	chr6	+	1368	6	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	90.4464482442511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGCAGTGAAGAGTGAGA	2335	False	NA	11	True	AATAAA	-20	NA	113303959	113311146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310591_113310642_113310802
Isoform_157816_9	chr6	+	2134	6	NIC	ENSMUSG00000030271.15	novel	1601	7	NA	NA	1	1	intron_retention	FALSE	canonical	3	238	junction_4	8.77724330299668	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGCAGTGAAGAGTGAGA	2336	False	NA	11	True	AATAAA	-20	NA	113303960	113311146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113304324_113305325_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_157817_2579	chr6	+	1396	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	78	796	0	0	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTGCTCTGTGTGGG	NA	False	NA	38	True	ATTAAA	-30	NA	113355153	113366613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
Isoform_157818_238	chr6	+	1472	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	3	795	3	1	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTGCTCTGTGTGGGT	NA	False	NA	39	True	ATTAAA	-31	NA	113355078	113366614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
Isoform_157832_4	chr6	+	3701	12	ISM	ENSMUSG00000030276.20	ENSMUST00000032414.11	3168	13	266	4	227	0	intron_retention	FALSE	canonical	2	2	junction_1	6.38308715692435	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAAAGTTCTCTGGGC	NA	False	NA	NA	False	ATTAAA	-12	NA	113369684	113391544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_113369858_113370063_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
Isoform_157833_16	chr6	+	3548	11	ISM	ENSMUSG00000030276.20	ENSMUST00000203524.3	2745	13	-91	14	-91	0	intron_retention	FALSE	canonical	3	13	junction_6	3.96106046406767	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	113370029	113391530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
Isoform_157834_4	chr6	+	2423	11	ISM	ENSMUSG00000030276.20	ENSMUST00000203524.3	2745	13	-125	1173	-125	-1148	5prime_fragment	FALSE	canonical	3	13	junction_6	3.96106046406767	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTAGTCACCCTGCCAG	NA	False	NA	NA	False	AATATA	-18	NA	113369995	113390371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
Isoform_157835_357	chr6	+	1157	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	34	10	-7	10	multi-exon	FALSE	canonical	3	705	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCCTGTGCCTCGTGTTG	NA	False	NA	23	True	AATAAA	-27	NA	113419563	113425180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113419759_113424218
Isoform_157838_34	chr6	+	1163	2	FSM	ENSMUSG00000051256.11	ENSMUST00000204254.2	1147	2	-5	-11	-5	-9	multi-exon	FALSE	canonical	3	96	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGTGCCTCGTGTTGG	NA	False	NA	24	True	AATAAA	-28	NA	113419565	113425181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113419766_113424218
Isoform_157839_42	chr6	+	2333	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	40	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	8.17117899020487	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGTAGCACTCGTGTAT	5796	False	NA	5	True	AATAAA	-20	NA	113448427	113460100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
Isoform_157840_86	chr6	+	2302	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	8.17117899020487	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGTAGCACTCGTGTAT	5827	False	NA	5	True	AATAAA	-20	NA	113448458	113460100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
Isoform_157841_17	chr6	+	2298	18	NNC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	11.7320133995962	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAAGTAGCACTCGTGT	5827	False	NA	3	True	AATAAA	-18	NA	113448458	113460098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457720_113457779_113458144_113458197_113459243_113459340_113459457
Isoform_157842_15	chr6	+	2243	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	103	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	10.3632969597244	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGTAGCACTCGTGTAT	5859	False	NA	5	True	AATAAA	-20	NA	113448490	113460100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453386_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
Isoform_157843_27	chr6	+	2255	17	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	10.8137643769411	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAAGTAGCACTCGTGT	5827	False	NA	3	True	AATAAA	-18	NA	113448458	113460098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
Isoform_157845_55	chr6	+	2245	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	61	0	61	0	multi-exon	TRUE	canonical	3	165	junction_1	17.0945085399441	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1518	False	NA	13	True	AATAAA	-19	NA	113460318	113470299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
Isoform_157846_424	chr6	+	2039	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	267	0	141	0	multi-exon	FALSE	canonical	3	165	junction_1	17.0945085399441	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1724	False	NA	13	True	AATAAA	-19	NA	113460524	113470299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
Isoform_157854_7	chr6	+	749	5	FSM	ENSMUSG00000034023.17	ENSMUST00000101051.5	2142	5	4	1389	4	-506	multi-exon	FALSE	canonical	3	329	junction_3	30.62984655528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGTCTGCCTGTC	NA	False	NA	NA	False	NA	NA	NA	113508668	113514291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884
Isoform_157863_255	chr6	+	5493	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	21	-2	-1	2	multi-exon	TRUE	canonical	3	237	junction_19	37.6323336574577	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113508663	113573980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
Isoform_157865_81	chr6	+	5451	43	FSM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	2	-746	2	2	multi-exon	FALSE	canonical	3	81	junction_38	50.0643576738687	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113508666	113573980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
Isoform_15787_418	chr11	-	2875	7	NIC	ENSMUSG00000018678.14	novel	2907	7	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	NA	False	NA	-11	True	ATTAAA	-16	NA	96868492	96844298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
Isoform_157873_249	chr6	+	1109	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-14	0	-14	0	multi-exon	FALSE	canonical	3	441	junction_2	10.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTTATGATCTGTT	NA	False	NA	11	True	AATAAA	-21	NA	113581718	113593912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113581858_113592736_113592820_113593025
Isoform_157874_662	chr6	+	854	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-14	255	-14	-255	multi-exon	FALSE	canonical	3	441	junction_2	10.5	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGACTGTGGTGGCAA	NA	False	NA	24	True	AATAAA	-17	NA	113581718	113593657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113581858_113592736_113592820_113593025
Isoform_157875_16	chr6	+	1163	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-68	0	-68	0	multi-exon	FALSE	canonical	3	441	junction_2	10.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTTATGATCTGTT	NA	False	NA	11	True	AATAAA	-21	NA	113581664	113593912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113581858_113592736_113592820_113593025
Isoform_157876_30	chr6	+	884	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-46	257	-46	-257	multi-exon	FALSE	canonical	3	441	junction_2	10.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGACTGTGGTGGC	NA	False	NA	22	True	AATAAA	-15	NA	113581686	113593655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113581858_113592736_113592820_113593025
Isoform_157878_468	chr6	+	2748	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	43	1	43	-1	multi-exon	FALSE	canonical	3	134	junction_1	12	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACTGTGTTGTGTTACC	201	False	NA	18	True	AATAAA	-18	NA	113600962	113608593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113601340_113605052_113605176_113606345
Isoform_15788_358	chr11	-	3008	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	45	1	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGCGTTTGGCAGTT	NA	False	NA	-16	True	AATAAA	-17	NA	96868492	96844165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
Isoform_157884_15	chr6	+	3118	13	FSM	ENSMUSG00000060477.15	ENSMUST00000059286.14	3196	13	63	15	2	2	multi-exon	FALSE	canonical	2	5	junction_1	6.70820393249937	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGTCTTATAATTTTG	NA	False	NA	11	True	AATAAA	-16	NA	113615490	113671972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113615603_113624599_113624783_113642663_113642808_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
Isoform_157887_30	chr6	+	1831	3	ISM	ENSMUSG00000060477.15	ENSMUST00000113024.3	1887	10	16983	-1213	-3984	2	3prime_fragment	FALSE	canonical	3	24	junction_1	1	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGTCTTATAATTTTG	3008	False	NA	11	True	AATAAA	-16	NA	113663721	113671972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_113663920_113667743_113668033_113670628
Isoform_157890_13	chr6	+	3235	8	FSM	ENSMUSG00000056952.14	ENSMUST00000204753.3	2645	8	-470	-120	44	0	multi-exon	FALSE	canonical	0	0	junction_7	1.95875845725744	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACATGTGGATATATATAA	1019	False	NA	12	True	AATAAA	-18	NA	113674054	113688030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_113674563_113674667_113675079_113679061_113679683_113680994_113681868_113684226_113684355_113686420_113686605_113687001_113687176_113687694
Isoform_157892_123	chr6	+	4169	16	FSM	ENSMUSG00000030310.11	ENSMUST00000032454.8	4302	16	125	8	-30	-8	multi-exon	FALSE	canonical	3	71	junction_3	10.8558228103119	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTGTATTGGTTACTT	NA	False	NA	4	True	AATAAA	-12	NA	114259720	114294485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
Isoform_157899_3	chr6	+	2818	2	NIC	ENSMUSG00000053004.10	novel	3782	3	NA	NA	-3	6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACAGGGCTGCTTTCTGTC	NA	False	NA	NA	False	AAAACA	-21	NA	114374893	114459437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_114374960_114456685
Isoform_157900_10	chr6	+	2520	21	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	41.3278356558869	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620082	114836185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_114620112_114623897_114624019_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_157901_6	chr6	+	2463	20	FSM	ENSMUSG00000030314.17	ENSMUST00000182793.8	2459	20	-1	-3	-1	0	multi-exon	FALSE	canonical	3	6	junction_2	42.1345950463867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620086	114836185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_114620112_114623897_114624019_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_157902_10	chr6	+	2545	21	FSM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	-2	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.8782759912583	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620087	114836185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_157903_142	chr6	+	2393	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620088	114836185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_157905_14	chr6	+	3766	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	-1	-15	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTGTTCTGAACAA	NA	False	NA	NA	False	TTTAAA	-12	NA	114620088	114837558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_157906_105	chr6	+	2340	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	31	1390	-1	0	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620088	114836185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_157908_8	chr6	+	3734	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	30	-3	0	3	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTTTCCTACAGAAA	NA	False	NA	NA	False	TATAAA	-18	NA	114620087	114837578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_157915_3	chr6	+	3836	11	FSM	ENSMUSG00000009394.14	ENSMUST00000169345.4	3854	11	16	2	1	-2	multi-exon	FALSE	canonical	0	0	junction_1	2.42693221990232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGTGTTAAGTTGTAA	NA	False	NA	11	True	AATAAA	-17	NA	115111878	115253518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115112422_115212974_115213033_115214215_115214308_115216319_115216477_115221106_115221197_115231123_115231187_115231550_115231694_115238615_115238691_115239482_115239586_115240792_115240943_115251156
Isoform_157916_3	chr6	+	2659	13	FSM	ENSMUSG00000009394.14	ENSMUST00000009538.12	2708	13	40	9	7	-9	multi-exon	FALSE	canonical	0	0	junction_1	2.49861072509416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCAGCCCTGAGGTT	NA	False	NA	NA	False	AATAAA	-21	NA	115111917	115258958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115112422_115212974_115213033_115214215_115214308_115216319_115216477_115221106_115221197_115231123_115231187_115231550_115231694_115238615_115238691_115239482_115239586_115240792_115240943_115251156_115251218_115255061_115255315_115258048
Isoform_157919_299	chr6	+	1778	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	35	293	-3	-293	multi-exon	FALSE	canonical	3	175	junction_1	38.6343314973604	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTTTGAGAGAATAAAT	NA	False	NA	13	True	AATAAA	-13	NA	115521659	115555296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
Isoform_157921_34	chr6	+	1696	11	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	-3	-293	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	74.5318723768563	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTTTGAGAGAATAAAT	NA	False	NA	13	True	AATAAA	-13	NA	115521659	115555296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_115521690_115524782_115524992_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
Isoform_157926_974	chr6	+	2278	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	11	3941	11	-3941	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGTATTCCTGGCTTT	NA	False	NA	NA	False	AATAAA	-30	NA	115578873	115595644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
Isoform_157927_32	chr6	+	5290	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	1	939	1	-939	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGCTTCTCAACTAT	NA	False	NA	26	True	AATAAA	-26	NA	115578863	115598646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
Isoform_157935_41	chr6	+	4778	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	33	663	33	-663	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGACAGTCAACCCTTC	NA	False	NA	43	True	AATAAA	-40	NA	115751531	115781855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
Isoform_157938_4	chr6	+	5161	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	16	297	16	-297	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115751514	115782221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
Isoform_15794_54	chr11	-	2888	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	35	132	35	0	multi-exon	FALSE	canonical	3	58	junction_6	154.880599172395	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	NA	False	NA	-11	True	ATTAAA	-16	NA	96868502	96844298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
Isoform_157944_4	chr6	+	5112	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	65	297	65	-297	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115751563	115782221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
Isoform_157945_3	chr6	+	4211	30	NIC	ENSMUSG00000030323.14	novel	3765	30	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	16.3185442683849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	6	True	AATAAA	-18	NA	115830517	115903656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115859607_115859785_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893930_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
Isoform_157946_6	chr6	+	4203	30	FSM	ENSMUSG00000030323.14	ENSMUST00000112923.7	3765	30	-73	-365	-18	0	multi-exon	FALSE	canonical	1	1	junction_7	14.4972833569763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	6	True	AATAAA	-18	NA	115830522	115903656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115859607_115859785_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
Isoform_157947_10	chr6	+	4031	29	FSM	ENSMUSG00000030323.14	ENSMUST00000038234.13	4056	29	29	-4	-21	0	multi-exon	FALSE	canonical	2	3	junction_21	12.6374080266743	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTCTGCGTTTTAGC	NA	False	NA	5	True	AATAAA	-17	NA	115830519	115903655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893930_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
Isoform_157948_52	chr6	+	3994	29	FSM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	124	4	6	0	multi-exon	FALSE	canonical	3	30	junction_5	9.69483346522091	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	6	True	AATAAA	-18	NA	115830554	115903656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
Isoform_15796_41	chr11	-	3012	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	45	-2	45	2	multi-exon	FALSE	canonical	3	58	junction_6	154.880599172395	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGCGTTTGGCAGTTG	NA	False	NA	-15	True	AATAAA	-18	NA	96868492	96844164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
Isoform_157963_179	chr6	+	4278	31	FSM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	10	19	2	2	multi-exon	FALSE	canonical	3	196	junction_27	51.0355975983648	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185008	116239628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_157965_111	chr6	+	4171	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	3	101	junction_26	58.2477793996823	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185052	116239628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_157966_59	chr6	+	4205	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	3	101	junction_26	58.2477793996823	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185018	116239628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_157967_10	chr6	+	3968	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-13	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_26	71.6795145499915	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185042	116239628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116235602_116236218_116237451_116237630_116239295
Isoform_157968_8	chr6	+	5620	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-3	4	intron_retention	FALSE	canonical	3	253	junction_1	40.3573798981661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTGTTCTTACTTAAT	NA	False	NA	14	True	AATAAA	-17	NA	116185052	116239630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_157970_9	chr6	+	6188	28	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-18	2	intron_retention	FALSE	canonical	3	253	junction_1	41.0870800635449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185037	116239628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_157971_10	chr6	+	4198	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	1	2	combination_of_known_splicesites	TRUE	canonical	3	9	junction_24	77.5973785060468	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185007	116239628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_157982_23	chr6	+	4218	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	intron_retention	FALSE	canonical	3	101	junction_25	57.5563942616992	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185082	116239626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_157995_3	chr6	+	3164	10	FSM	ENSMUSG00000042213.18	ENSMUST00000036503.14	3123	10	-44	3	-3	-2	multi-exon	FALSE	canonical	2	5	junction_4	4.89393678789894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATGACTTTATTTGAT	NA	False	NA	NA	False	AATAAA	-10	NA	116241179	116307257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_116241274_116250533_116250834_116261700_116261777_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
Isoform_157996_3	chr6	+	3094	9	FSM	ENSMUSG00000042213.18	ENSMUST00000222819.2	3087	9	-8	1	-8	-1	multi-exon	FALSE	canonical	1	1	junction_2	6.0917464655056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATGACTTTATTTGATT	NA	False	NA	NA	False	AATAAA	-11	NA	116241174	116307258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_116241274_116250533_116250834_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
Isoform_157997_7	chr6	+	2836	7	NIC	ENSMUSG00000042213.18	novel	3123	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	5.31245915016974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTTTATTTGATTAT	NA	False	NA	NA	False	AATAAA	-13	NA	116241179	116307260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_116241274_116250533_116250834_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
Isoform_157998_15	chr6	+	4447	8	FSM	ENSMUSG00000025702.16	ENSMUST00000079012.13	4450	8	0	3	0	-1	multi-exon	FALSE	canonical	2	9	junction_1	11.0564414690796	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTGTGATGAGAGTGT	NA	False	NA	7	True	AATAAA	-17	NA	116314984	116386498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_116315177_116315346_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
Isoform_157999_22	chr6	+	4339	7	NIC	ENSMUSG00000025702.16	novel	4450	8	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	11.9256958799989	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTTTGTGATGAGAG	NA	False	NA	4	True	AATAAA	-14	NA	116314984	116386495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_116315177_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
Isoform_1580_156	chr10	-	2429	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	320	8	15	0	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACCAGTCTGGATCCTT	NA	False	NA	-8	True	AATAAA	-12	NA	7539052	7505144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
Isoform_15800_72	chr11	-	1397	3	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	44	-6518	combination_of_known_splicesites	FALSE	canonical	3	301	junction_2	103	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAACAGCAAGAATGAG	NA	False	NA	-11	True	AATAAA	-21	NA	96868493	96851562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_96852836_96854190_96854268_96868446
Isoform_158001_35	chr6	+	4597	7	FSM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	8	6	-3	-4	multi-exon	FALSE	canonical	3	24	junction_1	7.30296743340222	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTTTGTGATGAGAG	NA	False	NA	4	True	AATAAA	-14	NA	116315001	116386495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
Isoform_158003_3	chr6	+	4412	7	FSM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	-14	213	-5	-211	multi-exon	FALSE	canonical	3	24	junction_1	7.30296743340222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGTAGTGTAGTT	NA	False	NA	12	True	AATAAA	-14	NA	116314979	116386288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
Isoform_158004_55	chr6	+	1122	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	-23	-1	-23	0	multi-exon	FALSE	canonical	3	26	junction_1	15	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	11	True	AATAAA	-18	NA	117818179	117822917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117818230_117820213_117820354_117821985
Isoform_158005_5	chr6	+	1141	3	FSM	ENSMUSG00000059689.16	ENSMUST00000112859.8	421	3	24	-744	23	0	multi-exon	FALSE	canonical	3	13	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	11	True	AATAAA	-18	NA	117818164	117822917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117818230_117820213_117820358_117821985
Isoform_158006_24	chr6	+	1209	3	FSM	ENSMUSG00000059689.16	ENSMUST00000136889.8	659	3	-7	-543	7	0	multi-exon	FALSE	canonical	3	25	junction_1	15.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	11	True	AATAAA	-18	NA	117818221	117822917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117818359_117820213_117820354_117821985
Isoform_158008_5	chr6	+	1205	3	FSM	ENSMUSG00000059689.16	ENSMUST00000112858.8	650	3	-15	-540	-2	-2	multi-exon	FALSE	canonical	3	13	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGGTATTTTTCATAA	NA	False	NA	8	True	AATAAA	-15	NA	117818226	117822914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117818359_117820213_117820358_117821985
Isoform_158010_5	chr6	+	497	3	ISM	ENSMUSG00000042097.18	ENSMUST00000134619.8	786	4	10	1261	3	-220	5prime_fragment	FALSE	canonical	3	15	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGACCCATGGTCTTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	117840047	117846439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_117840104_117843355_117843536_117846178
Isoform_158011_8	chr6	+	2812	4	FSM	ENSMUSG00000042097.18	ENSMUST00000172088.8	2812	4	1	-1	1	1	multi-exon	FALSE	canonical	3	15	junction_2	8.52447456836295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCAATGTGTTCATTTG	NA	False	NA	13	True	TTTAAA	-7	NA	117840038	117849727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117840104_117843355_117843536_117846178_117846235_117847216
Isoform_158012_29	chr6	+	2614	3	FSM	ENSMUSG00000042097.18	ENSMUST00000079405.15	3158	3	19	525	12	1	multi-exon	FALSE	canonical	3	13	junction_1	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCAATGTGTTCATTTG	NA	False	NA	13	True	TTTAAA	-7	NA	117840056	117849727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117840104_117846178_117846235_117847216
Isoform_158013_8	chr6	+	2573	2	FSM	ENSMUSG00000042097.18	ENSMUST00000112857.3	538	2	-7	-2028	0	-3	multi-exon	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCGTCCAATGTGTTCA	NA	False	NA	9	True	TTTAAA	-3	NA	117840037	117849723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117840104_117847216
Isoform_158014_215	chr6	+	2309	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	-37	-1	-21	0	multi-exon	TRUE	canonical	3	103	junction_1	2299.04709728956	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	False	NA	NA	False	AATAAA	-17	NA	117877263	117902583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
Isoform_158021_6645	chr6	+	2157	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	-7	-3	-2	0	multi-exon	FALSE	canonical	3	2150	junction_1	1335.10981654028	6645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	3727	False	NA	NA	False	AATAAA	-17	NA	117883748	117902583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
Isoform_15803_18	chr11	-	2481	6	FSM	ENSMUSG00000001444.3	ENSMUST00000001484.3	2488	6	3	4	3	-4	multi-exon	FALSE	canonical	2	5	junction_1	1.26491106406735	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACACGCCCTCCTTCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	97006154	96988900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96990205_96990595_96990658_96990752_96990912_96992304_96992427_96992769_96992925_97005475
Isoform_158030_1372	chr6	+	2484	4	NIC	ENSMUSG00000042079.14	novel	391	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	521	junction_1	2102.13325510592	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	3768	False	NA	NA	False	AATAAA	-16	NA	117883789	117902582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_117884170_117894430_117894560_117896059_117896121_117900668
Isoform_158039_1433	chr6	+	2175	4	FSM	ENSMUSG00000042079.14	ENSMUST00000179478.8	956	4	21	-1240	21	0	multi-exon	FALSE	canonical	3	625	junction_1	2053.14430948133	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	False	NA	NA	False	AATAAA	-17	NA	117893962	117902583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
Isoform_15804_15	chr11	-	2506	6	FSM	ENSMUSG00000001444.3	ENSMUST00000001484.3	2488	6	-20	2	-20	-2	multi-exon	FALSE	canonical	2	5	junction_1	1.26491106406735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACGCCCTCCTTCTGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	97006177	96988898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_96990205_96990595_96990658_96990752_96990912_96992304_96992427_96992769_96992925_97005475
Isoform_158046_1404	chr6	+	2278	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	3	-1	3	0	multi-exon	FALSE	canonical	3	4878	junction_1	99	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	False	NA	NA	False	AATAAA	-17	NA	117894257	117902583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_117894560_117896059_117896121_117900668
Isoform_158058_60	chr6	+	2270	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-38	-5	-38	5	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118043341	118067537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
Isoform_158059_14	chr6	+	2301	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-69	-5	-69	5	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118043310	118067537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
Isoform_158061_35	chr6	+	3238	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-36	-975	-36	0	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043343	118068507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
Isoform_158063_7	chr6	+	3324	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-122	-975	-122	0	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043257	118068507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
Isoform_158064_4	chr6	+	2515	12	NIC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-79	1	intron_retention	FALSE	canonical	3	24	junction_10	5.7653854529847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGGAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	118043300	118067533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066469_118066776
Isoform_158066_4	chr6	+	3326	14	NNC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	11.8646209703147	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043327	118068507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_118043424_118054858_118054931_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
Isoform_158068_50	chr6	+	1871	9	FSM	ENSMUSG00000041477.15	ENSMUST00000112777.9	3313	9	35	1407	0	3	multi-exon	FALSE	canonical	3	31	junction_6	11.8684192291981	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGGGGTTTTGTTCCT	NA	False	NA	12	True	AGTAAA	-19	NA	119152248	119197170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194763_119194941_119196963
Isoform_158069_23	chr6	+	1954	9	NNC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	15.8981130955846	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119152231	119197167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194694_119194941_119196963
Isoform_158070_10	chr6	+	4075	8	NIC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	31	junction_6	11.7038280847223	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119152237	119197167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119194941_119196963
Isoform_158071_12	chr6	+	1913	11	FSM	ENSMUSG00000030166.15	ENSMUST00000161816.8	1603	11	-9	-301	-9	-18	multi-exon	FALSE	canonical	3	22	junction_8	12.9769025580067	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-31	NA	119879679	119898577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767
Isoform_158072_15	chr6	+	1677	12	FSM	ENSMUSG00000030166.15	ENSMUST00000162461.7	1693	12	16	0	-9	0	multi-exon	FALSE	canonical	3	22	junction_8	13.1028985500622	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTTTGGCTTCAGGT	NA	False	NA	3	True	ATTAAA	-16	NA	119879679	119899784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767_119897990_119899432
Isoform_158084_4	chr6	+	7890	29	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-13	2048	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	8.37878759920867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCGGCTCTTCTGTACTT	NA	False	NA	7	True	AATATA	-15	NA	120341405	120418720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
Isoform_158085_4	chr6	+	8706	29	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-3	-2323	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	8.37878759920867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCAAAGTTGCACTTCT	NA	False	NA	9	True	ATTAAA	-24	NA	120341081	120419212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
Isoform_158086_12	chr6	+	8625	28	FSM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	-4	2323	-4	-2323	multi-exon	FALSE	canonical	3	38	junction_13	7.14421307921747	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCAAAGTTGCACTTCT	NA	False	NA	9	True	ATTAAA	-24	NA	120341080	120419212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
Isoform_158089_60	chr6	+	3959	13	FSM	ENSMUSG00000002897.6	ENSMUST00000002976.5	7752	13	-40	3833	-40	-3	multi-exon	FALSE	canonical	1	10	junction_10	8.77931596930472	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTCATAGTTGTTATT	272	False	NA	2	True	AATAAA	-15	NA	120440167	120460687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455124_120455137_120455335_120455444_120456963_120457006_120457943
Isoform_15809_10	chr11	-	3321	10	FSM	ENSMUSG00000038517.16	ENSMUST00000118375.8	3288	10	-29	-4	-27	0	multi-exon	FALSE	canonical	3	15	junction_9	16.2343942158479	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	7504	False	NA	-2	True	AATAAA	-17	NA	97040901	97026998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97040816
Isoform_158090_6	chr6	+	3940	12	NIC	ENSMUSG00000002897.6	novel	7752	13	NA	NA	-28	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	10.3052582261406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATAGTTGTTATTGAATC	284	False	NA	7	True	AATAAA	-20	NA	120440179	120460692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455335_120455444_120456963_120457006_120457943
Isoform_158093_3	chr6	+	5834	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-8	3386	-8	900	multi-exon	FALSE	canonical	3	53	junction_14	26.8930781860498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTGTAAAGGAATAT	NA	False	NA	7	True	AATAAA	-25	NA	120643373	120744765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
Isoform_158095_4	chr6	+	5515	19	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	26	566	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	28.4433593543032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTATATCCTATAGATT	NA	False	NA	NA	False	AATAAA	-24	NA	120643355	120744431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
Isoform_158098_18	chr6	+	5955	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-222	-884	-9	884	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCTGGAGTTTCAAGT	NA	False	NA	-9	True	AATAAA	-9	NA	120643320	120744749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
Isoform_15810_9	chr11	-	3335	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-23	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	17.5499287747842	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCGCTCAGGCTGT	6520	False	NA	-4	True	AATAAA	-15	NA	97041885	97027000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97041784
Isoform_158100_3	chr6	+	5706	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-292	-565	-79	565	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGTATATCCTATAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	120643250	120744430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
Isoform_158103_3	chr6	+	5812	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-20	898	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	31.1467116572332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTCTTTGTAAAGGAAT	NA	False	NA	5	True	AATAAA	-23	NA	120643309	120744763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
Isoform_158105_3	chr6	+	5523	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-61	568	combination_of_known_junctions	TRUE	canonical	3	38	junction_7	31.1467116572332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATCCTATAGATTTA	NA	False	NA	NA	False	AATAAA	-26	NA	120643268	120744433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
Isoform_158106_3	chr6	+	5444	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	12	565	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	32.559447892414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGTATATCCTATAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	120643341	120744430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
Isoform_158108_4	chr6	+	5907	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-45	884	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	29.3618399808122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCTGGAGTTTCAAGT	NA	False	NA	-9	True	AATAAA	-9	NA	120643284	120744749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
Isoform_158109_5	chr6	+	5531	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	11	564	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	29.3618399808122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAGTATATCCTATAGA	NA	False	NA	NA	False	AATAAA	-22	NA	120643340	120744429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
Isoform_158111_6	chr6	+	5826	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-8	895	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	30.8887948463326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAAGTCTTTGTAAAGG	NA	False	NA	2	True	AATAAA	-20	NA	120643373	120744760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
Isoform_158112_3	chr6	+	5023	3	ISM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	96004	1	4290	-1	3prime_fragment	FALSE	canonical	3	124	junction_1	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAGGCTTTCGTGTATGT	NA	False	NA	3	True	TATAAA	-16	NA	120739385	120748150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_120739519_120742232_120742345_120743372
Isoform_158113_3	chr6	+	4926	3	ISM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	96097	5	4383	-5	3prime_fragment	FALSE	canonical	3	124	junction_1	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTAAGGCTTTCGTGT	NA	False	NA	-1	True	TATAAA	-12	NA	120739478	120748146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_120739519_120742232_120742345_120743372
Isoform_158114_727	chr6	+	3112	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-20	3833	6	-3833	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGATGTTTTGAATGT	NA	False	NA	16	True	AATAAA	-27	NA	120813178	120865970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
Isoform_158117_28	chr6	+	6943	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-20	2	6	-2	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGACTCATCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	120813178	120869801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
Isoform_158121_9	chr6	+	3003	6	NIC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	0	-3840	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	77.7061130156438	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCAAGACCTGATGTTT	NA	False	NA	9	True	AATAAA	-20	NA	120813172	120865963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_120813319_120825416_120825578_120842528_120842686_120847726_120847797_120853163_120853308_120863638
Isoform_158125_64	chr6	+	3882	5	FSM	ENSMUSG00000067825.12	ENSMUST00000088561.10	4093	5	211	0	-11	0	multi-exon	FALSE	canonical	3	35	junction_4	5.31507290636732	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTGTTTCTACTTTC	NA	False	NA	NA	False	NA	NA	NA	121160836	121173151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170470
Isoform_158127_18	chr6	+	3864	5	FSM	ENSMUSG00000067825.12	ENSMUST00000120066.8	3861	5	-2	-1	-2	1	multi-exon	FALSE	canonical	2	7	junction_4	16.7406690427832	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTCATCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	121160845	121173145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170473
Isoform_158129_56	chr6	+	4591	36	FSM	ENSMUSG00000030111.10	ENSMUST00000032203.9	4605	36	6	8	6	-8	multi-exon	FALSE	canonical	3	32	junction_3	9.3958740402153	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATCACCATTCCTTCAT	NA	False	NA	19	True	AATAAA	-17	NA	121613192	121656178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121617943_121617965_121618230_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
Isoform_15813_30	chr11	-	3384	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	14.4990421139544	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	6058	False	NA	-2	True	AATAAA	-17	NA	97042347	97026998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
Isoform_158133_86	chr6	+	2380	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	119	16	119	-16	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACACGCTGG	2783	False	NA	-10	True	AATATA	-29	NA	122285797	122294623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
Isoform_158134_2131	chr6	+	2222	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	277	16	-2	-16	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	2131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACACGCTGG	2941	False	NA	-10	True	AATATA	-29	NA	122285955	122294623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
Isoform_158135_312	chr6	+	2290	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	209	16	-70	-16	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACACGCTGG	2873	False	NA	-10	True	AATATA	-29	NA	122285887	122294623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
Isoform_158136_75	chr6	+	2554	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	-55	16	-55	-16	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACACGCTGG	2609	False	NA	-10	True	AATATA	-29	NA	122285623	122294623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
Isoform_15814_7	chr11	-	3079	8	ISM	ENSMUSG00000038517.16	ENSMUST00000066078.12	3338	9	551	2	551	0	3prime_fragment	FALSE	canonical	3	33	junction_5	11.2938487863156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	8418	False	NA	-2	True	AATAAA	-17	NA	97039987	97026998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770
Isoform_158146_35	chr6	+	3854	6	FSM	ENSMUSG00000007458.15	ENSMUST00000123093.2	2976	6	-3	-875	-3	-16	multi-exon	FALSE	canonical	3	1209	junction_4	60.7466871524695	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACACGCTGG	2940	False	NA	-10	True	AATATA	-29	NA	122285954	122294623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122286126_122289192_122289373_122290217_122292126_122292262_122292394_122293008_122293136_122293286
Isoform_15815_9	chr11	-	3345	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	15.1070255914995	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	7483	False	NA	-2	True	AATAAA	-17	NA	97040922	97026998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97040816
Isoform_15816_37	chr11	-	3313	10	NIC	ENSMUSG00000038517.16	novel	2391	10	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	13.1487219488773	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	6132	False	NA	-2	True	AATAAA	-17	NA	97042273	97026998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
Isoform_158160_3	chr6	+	783	10	FSM	ENSMUSG00000030116.15	ENSMUST00000148517.8	1506	10	65	658	-11	0	multi-exon	FALSE	canonical	1	2	junction_5	61.5529481998934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTTTGCTGATTTCT	NA	False	NA	4	True	AATACA	-15	NA	122490606	122505591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122490692_122491299_122491360_122492306_122492343_122497537_122497571_122497854_122497888_122498851_122498888_122501445_122501470_122502909_122502998_122503745_122503820_122505277
Isoform_158161_3	chr6	+	1245	5	ISM	ENSMUSG00000030116.15	ENSMUST00000148517.8	1506	10	8255	4	-661	-4	3prime_fragment	FALSE	canonical	3	18	junction_1	53.3479146733966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGCTCACGGGCAT	7070	False	NA	NA	False	TTTAAA	-6	NA	122498796	122506245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_122498888_122501445_122501470_122502909_122502998_122503745_122503820_122505277
Isoform_158162_9	chr6	+	596	5	ISM	ENSMUSG00000030116.15	ENSMUST00000142896.8	425	9	8160	-297	-663	0	3prime_fragment	FALSE	canonical	3	18	junction_1	53.3479146733966	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTTGCTGATTTCTGGT	7068	False	NA	7	True	AATACA	-18	NA	122498794	122505594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_122498888_122501445_122501470_122502909_122502998_122503745_122503820_122505277
Isoform_158164_392	chr6	+	823	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	10	0	10	0	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGACTCTTTGTAATTTA	690	False	NA	24	True	AATAAA	-14	NA	122603378	122607231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
Isoform_158166_14	chr6	+	862	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	-29	0	-29	0	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGACTCTTTGTAATTTA	651	False	NA	24	True	AATAAA	-14	NA	122603339	122607231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
Isoform_158171_4186	chr6	+	2182	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	28	1	28	-1	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	4186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684554	122691591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
Isoform_15818_4	chr11	-	2021	9	ISM	ENSMUSG00000038517.16	ENSMUST00000118375.8	3288	10	-15	2228	-13	1	5prime_fragment	FALSE	canonical	3	15	junction_8	16.9096865730859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTGATTCCGACTCC	7518	False	NA	-9	True	ATTAAA	-16	NA	97040887	97029230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97040816
Isoform_158187_44	chr6	+	5278	11	FSM	ENSMUSG00000003154.16	ENSMUST00000003238.14	5283	11	-20	25	-20	0	multi-exon	TRUE	canonical	3	21	junction_1	4.4	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAAGAAAAGAA	2557	False	NA	50	True	NA	NA	NA	122796852	122822300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122797930_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
Isoform_15819_4	chr11	-	2054	9	NIC	ENSMUSG00000038517.16	novel	2391	10	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	18.3711730708738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTGATTCCGACTCC	6517	False	NA	-9	True	ATTAAA	-16	NA	97041888	97029230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97041784
Isoform_158193_1300	chr6	+	2399	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	79	-2	4	2	multi-exon	FALSE	canonical	3	520	junction_7	29.158959137102	1300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCATCTTTTAGT	867	False	NA	11	True	ATTAAA	-17	NA	122851511	122865902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
Isoform_158206_5	chr6	+	2112	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	7	891	7	-891	multi-exon	TRUE	canonical	2	10	junction_3	3.13687742827162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCCTCCTGTCCCAG	NA	False	NA	NA	False	NA	NA	NA	124470078	124486711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
Isoform_158208_3	chr6	+	2625	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	7	378	7	-378	multi-exon	FALSE	canonical	2	10	junction_3	3.13687742827162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATGAATACCATAAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	124470078	124487224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
Isoform_15821_3	chr11	-	2035	9	NIC	ENSMUSG00000038517.16	novel	2173	11	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	15.6079907419245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGCTTTGATTCCGACT	7505	False	NA	-11	True	ATTAAA	-14	NA	97040900	97029232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97040816
Isoform_158211_351	chr6	+	1953	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	80	248	-65	153	multi-exon	FALSE	canonical	3	738	junction_2	58.4776785524946	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTAGCATCCCAGACTGC	NA	False	NA	33	True	GATAAA	-27	NA	124640069	124681133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
Isoform_158212_870	chr6	+	1931	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	102	248	-43	153	multi-exon	FALSE	canonical	3	738	junction_2	58.4776785524946	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTAGCATCCCAGACTGC	NA	False	NA	33	True	GATAAA	-27	NA	124640091	124681133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
Isoform_158213_102	chr6	+	2210	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	60	11	60	-11	multi-exon	TRUE	canonical	3	738	junction_2	58.4776785524946	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAACAACTATAC	NA	False	NA	NA	False	AATAAA	-14	NA	124640049	124681370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
Isoform_158214_215	chr6	+	2168	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	102	11	-43	-11	multi-exon	FALSE	canonical	3	738	junction_2	58.4776785524946	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAACAACTATAC	NA	False	NA	NA	False	AATAAA	-14	NA	124640091	124681370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
Isoform_15822_4	chr11	-	2076	9	NIC	ENSMUSG00000038517.16	novel	2173	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	13.3603892158874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTGATTCCGACTCC	6083	False	NA	-9	True	ATTAAA	-16	NA	97042322	97029230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
Isoform_158230_5328	chr6	+	1323	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	902.100985200659	5328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTGTCTGAGTGT	NA	False	NA	20	True	AATAAA	-21	NA	124689283	124693909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
Isoform_158231_123	chr6	+	1404	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-96	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	902.100985200659	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTGTCTGAGTGT	NA	False	NA	20	True	AATAAA	-21	NA	124689202	124693909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
Isoform_158248_7	chr6	+	1175	3	FSM	ENSMUSG00000038451.14	ENSMUST00000143040.8	882	3	-11	-282	-11	-1	multi-exon	FALSE	canonical	3	7	junction_1	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTTCATTATTGTTTT	NA	False	NA	18	True	AGTAAA	-21	NA	124785836	124787581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124785919_124786189_124786933_124787231
Isoform_158249_3	chr6	+	1192	3	NIC	ENSMUSG00000038451.14	novel	1219	3	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGTTTCATTATTGTT	NA	False	NA	16	True	AGTAAA	-19	NA	124785844	124787579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124785946_124786189_124786933_124787231
Isoform_158250_27	chr6	+	1230	3	FSM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	-12	1	9	-1	multi-exon	FALSE	canonical	3	20	junction_1	6.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTTCATTATTGTTTT	NA	False	NA	18	True	AGTAAA	-21	NA	124785856	124787581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124785994_124786189_124786933_124787231
Isoform_158251_28	chr6	+	1090	7	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	-4	-228	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	434.945207277116	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACACCGGGTCTTGTGTGT	1358	False	NA	55	True	ATTAAA	-42	NA	124807193	124810267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124807237_124807326_124807381_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_158254_30	chr6	+	1143	6	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	0	-256	intron_retention	FALSE	canonical	0	0	junction_3	431.365552634885	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGCTTTAAGAAGTTA	1362	False	NA	27	True	ATTAAA	-14	NA	124807197	124810239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124807237_124807326_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_158257_738	chr6	+	1039	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	543	394	-4	-225	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGGTCTTGTGTGTATA	1358	False	NA	58	True	ATTAAA	-45	NA	124807193	124810270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_158258_238	chr6	+	1058	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	515	403	-14	-234	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTACACCGGGTCTT	1330	False	NA	49	True	ATTAAA	-36	NA	124807165	124810261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_158259_40	chr6	+	1433	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	543	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTTGTCTTGCCT	1358	False	NA	39	True	NA	NA	NA	124807193	124810664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_158261_24	chr6	+	1467	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	507	2	-22	-2	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTTGTCTTGTCTTGC	1322	False	NA	37	True	NA	NA	NA	124807157	124810662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_158264_55	chr6	+	1671	5	FSM	ENSMUSG00000023505.14	ENSMUST00000134637.8	1917	5	-10	256	8	-256	multi-exon	FALSE	canonical	3	695	junction_1	91.4969261778777	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGCTTTAAGAAGTTA	1352	False	NA	27	True	ATTAAA	-14	NA	124807187	124810239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124807237_124807465_124807614_124808324_124809403_124809528_124809633_124809947
Isoform_158272_302	chr6	+	1692	8	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-46	6	0	-5	intron_retention	FALSE	canonical	3	3577	junction_4	212.973122765311	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGAAGATTCTGGCT	NA	False	NA	21	True	AATAAA	-11	NA	124908348	124913102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195
Isoform_158274_79	chr6	+	1534	9	FSM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	-90	7	0	-7	multi-exon	FALSE	canonical	3	152	junction_8	1260.71298651795	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGTGAAGATTCTGG	NA	False	NA	19	True	AATAAA	-9	NA	124908348	124913100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
Isoform_158276_2435	chr6	+	1514	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-46	7	0	-6	multi-exon	FALSE	canonical	3	3449	junction_8	252.103029533562	2435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908348	124913101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
Isoform_158297_20	chr6	+	2168	6	FSM	ENSMUSG00000030329.12	ENSMUST00000032479.11	2250	6	80	2	80	-2	multi-exon	FALSE	canonical	3	20	junction_1	10.6094297678999	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTAGTTGCCTGTTTTGC	8110	False	NA	14	True	AATAAA	-14	NA	124973736	124980057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124973903_124975880_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
Isoform_158299_5	chr6	+	2100	5	ISM	ENSMUSG00000030329.12	ENSMUST00000162170.8	2053	6	383	2	181	-2	3prime_fragment	FALSE	canonical	3	36	junction_1	6.9462219947249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTAGTTGCCTGTTTTGC	NA	False	NA	14	True	AATAAA	-14	NA	124975782	124980057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
Isoform_158301_11	chr6	+	3269	12	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	68.436131774315	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124985995	125014831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
Isoform_158303_7	chr6	+	2852	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	70.3565917309814	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTCATATTGATGTTT	NA	False	NA	3	True	TATAAA	-15	NA	124985995	125014597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
Isoform_158304_6	chr6	+	3086	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	70.3565917309814	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124985995	125014831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
Isoform_158305_5	chr6	+	3174	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	1	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.9912720347511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	4	True	AATAAA	-15	NA	124985995	125014829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
Isoform_158307_10	chr6	+	3001	10	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-119	-1	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.4360537752075	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGTGAGCTACTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	124985988	125014832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
Isoform_158313_15	chr6	+	3575	12	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-164	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	63.0599871826111	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124985943	125014831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
Isoform_158316_13	chr6	+	3167	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112428.8	3132	11	-257	222	-164	6	multi-exon	FALSE	canonical	0	0	junction_7	64.1467068523397	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGTTTTATTTTTGT	NA	False	NA	12	True	TATAAA	-24	NA	124985943	125014606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
Isoform_158319_6	chr6	+	3391	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112428.8	3132	11	-256	-3	-163	-2	multi-exon	FALSE	canonical	0	0	junction_7	64.1467068523397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124985944	125014831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
Isoform_158321_4	chr6	+	3989	11	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-164	-3	intron_retention	FALSE	canonical	0	0	junction_7	62.6083860197658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTCATATTGATGTTT	NA	False	NA	3	True	TATAAA	-15	NA	124985943	125014597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125008817_125010202_125010282_125012675_125012835_125013268
Isoform_158322_6	chr6	+	2932	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	23	117	23	6	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGTTTTATTTTTGT	NA	False	NA	12	True	TATAAA	-24	NA	124986268	125014606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
Isoform_158323_6	chr6	+	3457	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	-276	-109	-138	-1	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGTGAGCTACTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	124985969	125014832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
Isoform_158327_4	chr6	+	3248	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	-302	126	-164	-3	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTCATATTGATGTTT	NA	False	NA	3	True	TATAAA	-15	NA	124985943	125014597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
Isoform_158328_5	chr6	+	2990	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	42.3661290288467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCAGTGAGCTACTGT	NA	False	NA	5	True	AATAAA	-16	NA	124986251	125014830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
Isoform_158331_4	chr6	+	3025	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	42.3661290288467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	4	True	AATAAA	-15	NA	124986215	125014829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
Isoform_158332_9	chr6	+	3064	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-164	-4	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	42.3661290288467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCATATTGATGTT	NA	False	NA	2	True	TATAAA	-14	NA	124985943	125014596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
Isoform_158338_4	chr6	+	1626	8	FSM	ENSMUSG00000030330.16	ENSMUST00000140131.8	1446	8	81	-261	5	-1	multi-exon	FALSE	canonical	3	42	junction_4	35.3345526679608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTGTGCGGTGATA	7112	False	NA	5	True	AATAAA	-15	NA	125016803	125026226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024441_125024551_125024755_125024904_125025138_125025201_125025330
Isoform_158339_4	chr6	+	1362	8	FSM	ENSMUSG00000030330.16	ENSMUST00000140131.8	1446	8	84	0	-4	0	multi-exon	FALSE	canonical	3	42	junction_4	35.3345526679608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	7115	False	NA	8	True	AATAAA	-15	NA	125016806	125025965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024441_125024551_125024755_125024904_125025138_125025201_125025330
Isoform_158340_3	chr6	+	1837	7	NIC	ENSMUSG00000030330.16	novel	1446	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	42	junction_4	38.1506516618291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7108	False	NA	7	True	AATAAA	-17	NA	125016799	125026228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024441_125024904_125025138_125025201_125025330
Isoform_158342_34	chr6	+	1628	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	1	0	1	0	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7108	False	NA	6	True	AATAAA	-16	NA	125016799	125026227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
Isoform_158343_3	chr6	+	1684	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	-58	3	18	-3	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATGTGTGTGCGGTGA	7049	False	NA	3	True	AATAAA	-13	NA	125016740	125026224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
Isoform_158344_17	chr6	+	1833	7	ISM	ENSMUSG00000108037.3	ENSMUST00000140883.7	3181	10	-8	2235	-8	-2235	5prime_fragment	FALSE	canonical	3	91	junction_4	20.4857674170793	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7108	False	NA	6	True	AATAAA	-16	NA	125016799	125026227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024904_125025138_125025201_125025330
Isoform_158347_7	chr6	+	1462	7	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	40.4533338826632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7107	False	NA	6	True	AATAAA	-16	NA	125016798	125026227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
Isoform_158349_4	chr6	+	1405	6	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_2	44.0336235165811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	7107	False	NA	8	True	AATAAA	-15	NA	125016798	125025965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125024904_125025138_125025201_125025330
Isoform_158351_79	chr6	+	1246	5	FSM	ENSMUSG00000072770.10	ENSMUST00000112414.8	1498	5	252	0	-6	0	multi-exon	FALSE	canonical	3	86	junction_4	12.3490890352285	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	17	True	ACTAAA	-24	NA	125026903	125031157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452
Isoform_158353_3	chr6	+	1569	6	ISM	ENSMUSG00000072770.10	ENSMUST00000088294.12	1883	10	-41	8053	-29	-2	5prime_fragment	FALSE	canonical	3	11	junction_5	39.188773902739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125026880	125032177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635
Isoform_158354_17	chr6	+	1901	10	FSM	ENSMUSG00000072770.10	ENSMUST00000088294.12	1883	10	-18	0	-6	0	multi-exon	FALSE	canonical	3	10	junction_9	45.7669890199324	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACGTGCTCTGCTTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	125026903	125040230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635_125031769_125037772_125037953_125038048_125038217_125039398_125039483_125039898
Isoform_158355_5	chr6	+	1129	4	NIC	ENSMUSG00000072770.10	novel	1498	5	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	51.6978400580398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	17	True	ACTAAA	-24	NA	125026902	125031157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_125027016_125027396_125027613_125027809_125027905_125030452
Isoform_158356_5	chr6	+	1161	4	ISM	ENSMUSG00000072770.10	ENSMUST00000112414.8	1498	5	718	0	440	0	3prime_fragment	FALSE	canonical	3	86	junction_3	13.4742552876052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	17	True	ACTAAA	-24	NA	125027369	125031157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_125027613_125027809_125027905_125028205_125028324_125030452
Isoform_158357_41	chr6	+	2959	2	FSM	ENSMUSG00000107761.2_ENSMUSG00000067714.14	ENSMUST00000088292.7	1393	2	0	-1566	0	9	multi-exon	FALSE	canonical	2	17	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAGAAGCACACATTCC	5038	False	NA	NA	False	NA	NA	NA	125044882	125061001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125044940_125058099
Isoform_158360_5	chr6	+	3214	2	FSM	ENSMUSG00000107761.2_ENSMUSG00000067714.14	ENSMUST00000088292.7	1393	2	-256	-1565	-256	8	multi-exon	FALSE	canonical	2	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAGAAGCACACATTC	4782	False	NA	NA	False	NA	NA	NA	125044626	125061000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125044940_125058099
Isoform_158361_3	chr6	+	3065	3	Fusion	ENSMUSG00000107761.2_ENSMUSG00000067714.14	novel	1393	2	NA	NA	-5	3	multi-exon	FALSE	canonical	1	1	junction_1	5.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGGAAATACAGAAGCACA	5033	False	NA	NA	False	NA	NA	NA	125044877	125060995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr6_+_125044940_125045223_125045331_125058099
Isoform_158362_6	chr6	+	3067	2	FSM	ENSMUSG00000107761.2_ENSMUSG00000067714.14	ENSMUST00000171989.3	1458	2	-38	-1571	-38	14	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCACACATTCCATTTA	8357	False	NA	NA	False	NA	NA	NA	125048201	125061006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125048362_125058099
Isoform_158367_13	chr6	+	6519	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	18	0	3	0	multi-exon	FALSE	canonical	3	54	junction_3	116.234542355382	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1807	False	NA	14	True	AATAAA	-18	NA	125073142	125107554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
Isoform_158369_11	chr6	+	6588	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	-52	1	-52	-1	multi-exon	FALSE	canonical	3	54	junction_3	116.234542355382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	1737	False	NA	13	True	AATAAA	-17	NA	125073072	125107553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
Isoform_158371_9	chr6	+	6479	39	NIC	ENSMUSG00000063870.13	novel	6537	39	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	119.03378323504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	1807	False	NA	13	True	AATAAA	-17	NA	125073142	125107553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
Isoform_158377_79	chr6	+	6497	39	FSM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	199	1	3	-1	multi-exon	FALSE	canonical	3	138	junction_8	108.606041087339	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	1807	False	NA	13	True	AATAAA	-17	NA	125073142	125107553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
Isoform_158378_15	chr6	+	6581	39	FSM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	116	0	-65	0	multi-exon	FALSE	canonical	3	138	junction_8	108.606041087339	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1724	False	NA	14	True	AATAAA	-18	NA	125073059	125107554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
Isoform_158380_29	chr6	+	6517	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	141	-6	-40	0	multi-exon	FALSE	canonical	3	85	junction_8	111.644804298587	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1749	False	NA	14	True	AATAAA	-18	NA	125073084	125107554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
Isoform_1584_226	chr10	-	1151	7	FSM	ENSMUSG00000019795.18	ENSMUST00000163085.8	1132	7	-27	8	15	-8	multi-exon	FALSE	canonical	3	667	junction_3	37.7491721763537	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAGCCATCATTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	7539052	7513501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
Isoform_158446_2844	chr6	+	2626	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-29	0	-29	0	multi-exon	FALSE	canonical	0	0	junction_7	206.283558885983	2844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5408	False	NA	25	True	AATATA	-17	NA	125108842	125121716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
Isoform_158449_45	chr6	+	2650	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-52	-1	-52	1	multi-exon	TRUE	canonical	0	0	junction_7	206.283558885983	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTGTTTTTTGAG	5385	False	NA	26	True	AATATA	-18	NA	125108819	125121717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
Isoform_158452_32	chr6	+	2741	15	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-29	0	intron_retention	FALSE	canonical	0	0	junction_7	212.708109379775	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5408	False	NA	25	True	AATATA	-17	NA	125108842	125121716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118466_125120963
Isoform_158478_50	chr6	+	2833	9	NIC	ENSMUSG00000038271.18	novel	2283	10	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	12.7616368464237	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8232	False	NA	6	True	AATAAA	-13	NA	125122208	125138740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
Isoform_158480_24	chr6	+	2832	9	FSM	ENSMUSG00000038271.18	ENSMUST00000119527.8	2840	9	3	5	3	1	multi-exon	FALSE	canonical	3	11	junction_6	15.028618532653	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8230	False	NA	6	True	AATAAA	-13	NA	125122206	125138740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130372_125130466_125136024_125136156_125137495
Isoform_158481_6	chr6	+	3079	8	FSM	ENSMUSG00000038271.18	ENSMUST00000141230.8	3056	8	-22	-1	3	1	multi-exon	FALSE	canonical	3	22	junction_1	12.7711409363583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8230	False	NA	6	True	AATAAA	-13	NA	125122206	125138740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
Isoform_158482_5	chr6	+	2919	10	NNC	ENSMUSG00000038271.18	novel	2283	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	16.5058912041866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8230	False	NA	6	True	AATAAA	-13	NA	125122206	125138740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
Isoform_158483_5	chr6	+	2933	10	NNC	ENSMUSG00000038271.18	novel	2833	10	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	17.7374542691621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8213	False	NA	6	True	AATAAA	-13	NA	125122189	125138740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130372_125130466_125136024_125136156_125137495
Isoform_158484_15	chr6	+	3163	9	NNC	ENSMUSG00000038271.18	novel	3056	8	NA	NA	3	1	intron_retention	FALSE	canonical	2	8	junction_1	17.2898091371767	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8230	False	NA	6	True	AATAAA	-13	NA	125122206	125138740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
Isoform_158486_18	chr6	+	806	3	FSM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	15	34	15	-34	multi-exon	FALSE	canonical	3	70	junction_1	333	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCCCAGTGCTACATTT	NA	False	NA	15	True	AATAAA	-25	NA	125168778	125170487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125169172_125169478_125169590_125170185
Isoform_158488_214	chr6	+	665	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	46	2716	-6	-5	multi-exon	FALSE	canonical	3	716	junction_1	10	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACGTCTGCCTCGTTC	NA	False	NA	44	True	GGGGCT	-43	NA	125169173	125170516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125169397_125169478_125169590_125170185
Isoform_158489_41	chr6	+	680	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	0	2747	0	-36	multi-exon	FALSE	canonical	3	716	junction_1	10	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATGCCCAGTGCTACAT	NA	False	NA	13	True	AATAAA	-23	NA	125169127	125170485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125169397_125169478_125169590_125170185
Isoform_158492_14	chr6	+	1504	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	46	1877	-6	834	multi-exon	FALSE	canonical	3	716	junction_1	10	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAAAGATATTTTAA	NA	False	NA	NA	False	NA	NA	NA	125169173	125171355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125169397_125169478_125169590_125170185
Isoform_158497_11	chr6	+	3483	12	FSM	ENSMUSG00000030340.17	ENSMUST00000081440.14	3499	12	13	3	13	-3	multi-exon	FALSE	canonical	2	3	junction_6	2.74539434009845	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTCTGCAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	125298315	125321903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125299338_125307873_125308148_125309055_125309247_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
Isoform_158498_135	chr6	+	2141	10	FSM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	7	8	7	-8	multi-exon	FALSE	canonical	3	24	junction_1	4.54062594260057	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCGCTGACCCTGG	3783	False	NA	7	True	AATACA	-12	NA	125326692	125339439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
Isoform_158500_3	chr6	+	1445	5	FSM	ENSMUSG00000030341.18	ENSMUST00000134803.2	764	5	-72	-609	-72	-1	multi-exon	FALSE	canonical	3	27	junction_3	5.67340285895511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTGACCCTGGAAAGAGT	NA	False	NA	14	True	AATACA	-19	NA	125337317	125339446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
Isoform_158501_3	chr6	+	1298	4	FSM	ENSMUSG00000101191.7	ENSMUST00000187542.7	782	4	46	-562	46	562	multi-exon	FALSE	canonical	1	2	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAAAGTGGGAATTCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	125458371	125462203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_125458438_125459526_125459666_125460403_125460533_125461239
Isoform_158502_7	chr6	+	837	4	ISM	ENSMUSG00000001930.18	ENSMUST00000112253.6	2184	10	35606	301	-14981	-4	3prime_fragment	FALSE	canonical	3	17	junction_3	6.84754619472471	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCGGGAAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	125565531	125569133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_125565597_125567141_125567265_125568112_125568225_125568596
Isoform_158504_201	chr6	+	2142	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	10	349	1	4	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCATGTGAAAATGTTT	NA	False	NA	NA	False	AATATA	-14	NA	126916938	126952581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
Isoform_158505_44	chr6	+	2226	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	11	264	2	89	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTTACTCTTCTTCTCT	NA	False	NA	NA	False	TTTAAA	-20	NA	126916939	126952666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
Isoform_158506_6	chr6	+	2426	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	12	63	3	-63	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGCCTCTTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	126916940	126952867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
Isoform_158508_10	chr6	+	2381	14	NIC	ENSMUSG00000030347.7	novel	2501	14	NA	NA	-6	6	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	30.9083393890222	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGTGAAAATGTTTTT	NA	False	NA	NA	False	TATAAA	-1	NA	126916985	126952583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_126917274_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
Isoform_158510_8	chr6	+	1732	7	FSM	ENSMUSG00000037997.13	ENSMUST00000112193.8	1725	7	-5	-2	4	2	multi-exon	FALSE	canonical	3	34	junction_4	10.0443461155462	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATTTCTGGTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	127430632	127456020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961
Isoform_158511_50	chr6	+	3818	9	FSM	ENSMUSG00000037997.13	ENSMUST00000039680.7	3746	9	-94	22	9	-1	multi-exon	FALSE	canonical	3	34	junction_4	10.4403065089106	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430591	127471202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
Isoform_158512_15	chr6	+	3709	8	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	15.8513502933488	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGGCTGCCTGTGTGT	NA	False	NA	9	True	ATTAAA	-14	NA	127430577	127471200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_127430786_127444994_127445116_127447664_127447794_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
Isoform_158513_14	chr6	+	3815	9	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	16.3018403869011	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430591	127471202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_127430786_127444994_127445116_127447667_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
Isoform_158515_15	chr6	+	3450	6	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	18.7125626251457	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430588	127471202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_127430786_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
Isoform_158516_6	chr6	+	5961	5	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	7	260	7	-260	intron_retention	FALSE	canonical	3	167	junction_1	12.031209415516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	8	True	TATAAA	-21	NA	128339936	128352849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919
Isoform_158519_13	chr6	+	4386	8	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	9	-260	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	60.3665673115475	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	8	True	TATAAA	-21	NA	128339938	128352849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349493_128349567_128349739
Isoform_158521_6	chr6	+	4617	8	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-224	-262	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	60.3665673115475	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGTACACAGCCTGGA	NA	False	NA	6	True	TATAAA	-19	NA	128339705	128352847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349493_128349567_128349739
Isoform_158522_11	chr6	+	3373	8	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-21	877	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	60.3665673115475	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGCGAGAGGTGGAGCC	NA	False	NA	8	True	AATAAA	-22	NA	128339908	128351806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349493_128349567_128349739
Isoform_158525_54	chr6	+	4613	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-215	254	-215	-254	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCCTGGAGGTGATTT	NA	False	NA	14	True	TATAAA	-27	NA	128339714	128352855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
Isoform_158528_148	chr6	+	4385	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	7	260	7	-260	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	8	True	TATAAA	-21	NA	128339936	128352849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
Isoform_158540_64	chr6	+	4347	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	7	-253	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCTGGAGGTGATTTA	NA	False	NA	15	True	TATAAA	-28	NA	128339936	128352856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
Isoform_158541_31	chr6	+	3320	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-16	877	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGCGAGAGGTGGAGCC	NA	False	NA	8	True	AATAAA	-22	NA	128339913	128351806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
Isoform_158543_25	chr6	+	4571	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-224	-260	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	8	True	TATAAA	-21	NA	128339705	128352849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
Isoform_158550_164	chr6	+	1775	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	30	15	-10	-15	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGACTCAGAATTGTG	NA	False	NA	19	True	AATAAA	-23	NA	129510152	129519294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
Isoform_158551_70	chr6	+	1803	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	2	15	2	-15	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGACTCAGAATTGTG	NA	False	NA	19	True	AATAAA	-23	NA	129510124	129519294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
Isoform_158556_36	chr6	+	5562	9	FSM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	133	12	133	-9	multi-exon	FALSE	canonical	3	28	junction_2	19.2418814048939	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCAAGTCC	NA	False	NA	NA	False	AATAAA	-10	NA	134012795	134247109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
Isoform_158558_4	chr6	+	5754	9	FSM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	-47	0	-47	0	multi-exon	FALSE	canonical	3	28	junction_2	19.2418814048939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCCAAGTCTCTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	134012615	134247121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
Isoform_158559_3	chr6	+	5542	9	NIC	ENSMUSG00000030199.17	novel	5707	9	NA	NA	-119	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26.8048503073604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCAAGTCC	NA	False	NA	NA	False	AATAAA	-10	NA	134012812	134247109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_134013102_134043269_134043429_134114250_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
Isoform_158561_27	chr6	+	5382	8	FSM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	153	10	-116	-10	multi-exon	FALSE	canonical	3	29	junction_1	18.3358687176979	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCAAGTC	NA	False	NA	NA	False	AATAAA	-9	NA	134012815	134247108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134013102_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
Isoform_158562_3	chr6	+	5902	8	FSM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	-367	10	-367	-10	multi-exon	FALSE	canonical	3	29	junction_1	18.3358687176979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCAAGTC	NA	False	NA	NA	False	AATAAA	-9	NA	134012295	134247108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134013102_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
Isoform_158567_71	chr6	+	2155	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	43	-620	6	-1	multi-exon	FALSE	canonical	3	57	junction_3	10	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAGTTGCCTGTAAC	NA	False	NA	12	True	AATAAA	-24	NA	134391433	134415698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
Isoform_158569_7	chr6	+	2322	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	-122	-622	-122	1	multi-exon	FALSE	canonical	3	57	junction_3	10	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGCCTGTAACCC	NA	False	NA	14	True	AATAAA	-26	NA	134391268	134415700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
Isoform_158570_10	chr6	+	1685	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	-109	2	-109	-2	multi-exon	FALSE	canonical	3	57	junction_3	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTAGTCTCTAACACT	NA	False	NA	3	True	GATAAA	-14	NA	134391281	134415076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
Isoform_158571_5	chr6	+	1346	3	FSM	ENSMUSG00000042992.16	ENSMUST00000203234.2	485	3	-209	-652	85	652	multi-exon	FALSE	canonical	3	52	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134618008	134663916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134618221_134621291_134621436_134662926
Isoform_158573_71	chr6	+	1628	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	118	18	97	-18	multi-exon	FALSE	canonical	3	52	junction_1	6.37704215656966	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTGTGTAGCAGCTAA	NA	False	NA	13	True	ATTAAA	-14	NA	134618020	134688132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
Isoform_158575_25	chr6	+	3614	5	FSM	ENSMUSG00000032652.14	ENSMUST00000046303.12	3629	5	9	6	9	-6	multi-exon	FALSE	canonical	3	17	junction_3	2.06155281280883	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACGTTCAGTTGCCTG	NA	False	NA	2	True	AATAAA	-13	NA	134807125	134835888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134807408_134826065_134826264_134828042_134828188_134829240_134829278_134832936
Isoform_158578_4	chr6	+	3266	4	FSM	ENSMUSG00000032652.14	ENSMUST00000111937.2	612	4	111	-2765	111	-6	multi-exon	FALSE	canonical	0	0	junction_2	9.41629792788369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACGTTCAGTTGCCTG	NA	False	NA	2	True	AATAAA	-13	NA	134807328	134835888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134807408_134826065_134826264_134829240_134829278_134832936
Isoform_158579_4	chr6	+	3084	2	FSM	ENSMUSG00000003031.15	ENSMUST00000067327.11	4552	2	16	1452	16	-1259	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAACAAAAATCCAGC	NA	False	NA	NA	False	NA	NA	NA	134897379	134901024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134898358_134898918
Isoform_158580_5	chr6	+	1178	2	FSM	ENSMUSG00000003031.15	ENSMUST00000067327.11	4552	2	-56	3430	-56	-3237	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTTAATGAGGAAGAAC	NA	False	NA	NA	False	NA	NA	NA	134897307	134899046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134898358_134898918
Isoform_158583_3	chr6	+	2441	3	FSM	ENSMUSG00000003031.15	ENSMUST00000003115.9	2393	3	-47	-1	-47	1	multi-exon	FALSE	canonical	2	2	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGAGTGCAACTGTCCT	NA	False	NA	14	True	AATAAA	-19	NA	134897316	134902477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134898358_134898918_134899047_134901205
Isoform_158589_67	chr6	+	404	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	36	5222	-5	1	multi-exon	FALSE	canonical	3	145	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	8001	False	NA	25	True	NA	NA	NA	134906090	134928539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134906224_134928268
Isoform_158590_7	chr6	+	512	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	-72	5222	-72	1	multi-exon	FALSE	canonical	3	145	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	7893	False	NA	25	True	NA	NA	NA	134905982	134928539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134906224_134928268
Isoform_158592_11	chr6	+	429	2	FSM	ENSMUSG00000098318.8	ENSMUST00000184504.2	544	2	-27	142	-5	1	multi-exon	FALSE	canonical	3	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	8001	False	NA	25	True	NA	NA	NA	134906090	134928539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134906249_134928268
Isoform_158594_1542	chr6	+	1752	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	8	4	-2	0	multi-exon	TRUE	canonical	3	485	junction_5	30.2182146373304	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGTGTGTG	6582	False	NA	16	True	ATTAAA	-16	NA	134988582	135000735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
Isoform_158596_20	chr6	+	2500	11	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	485	junction_5	31.3687742827162	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGTGTGTGTCTGTGT	6593	False	NA	13	True	ATTAAA	-13	NA	134988593	135000732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134998542_135000241
Isoform_158609_183	chr6	+	2058	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	23	2	23	-2	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTATTTATTTATTTAT	NA	False	NA	30	True	AATAAA	-30	NA	135042671	135061705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
Isoform_158610_61	chr6	+	2080	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	-12	15	-12	-15	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAATCTAAATGTTA	NA	False	NA	17	True	AATAAA	-17	NA	135042636	135061692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
Isoform_158611_3	chr6	+	2368	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	-300	15	-300	-15	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAATCTAAATGTTA	NA	False	NA	17	True	AATAAA	-17	NA	135042348	135061692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
Isoform_158615_196	chr6	+	4151	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	70	0	-62	0	multi-exon	FALSE	canonical	3	64	junction_6	10.7558123821495	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTGTCCTTTTCTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	135175044	135213240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
Isoform_158618_3	chr6	+	4020	13	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-65	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	29.4489907391672	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACGTGTGTCCTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	135175041	135213236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_135175100_135186030_135186430_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976_135212675_135212705
Isoform_158619_23	chr6	+	4179	13	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-62	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	20.9165006633519	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGTGTGTCCTTTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	135175044	135213238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_135175100_135186030_135186430_135188802_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
Isoform_158621_4	chr6	+	3563	11	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-14717	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	24.8131013781027	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACACGTGTGTCCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	135193881	135213234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976_135212675_135212705
Isoform_158622_87	chr6	+	2638	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	83	0	6	0	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	7	True	TATAAA	-20	NA	135340011	135360171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
Isoform_158623_30	chr6	+	2698	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	23	0	23	0	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	7	True	TATAAA	-20	NA	135339951	135360171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
Isoform_158624_3	chr6	+	2708	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	83	-70	6	70	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTGCCTGCTGGTTTG	NA	False	NA	77	True	AATATA	-28	NA	135340011	135360241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
Isoform_158626_9	chr6	+	1637	2	FSM	ENSMUSG00000094973.3	ENSMUST00000204530.2	1573	2	0	-64	0	64	multi-exon	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAACTTATGGTGGGT	NA	False	NA	NA	False	TATAAA	-7	NA	136304536	136307045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_136304647_136305518
Isoform_158630_138	chr6	+	4242	15	FSM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	44	3773	0	-1230	multi-exon	FALSE	canonical	3	154	junction_2	25.3043716477963	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGGGTTTTGAAATGTA	7092	False	NA	31	True	AATAAA	-39	NA	136495843	136584087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
Isoform_158631_11	chr6	+	4377	15	FSM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	43	3639	-1	-1096	multi-exon	FALSE	canonical	3	154	junction_2	25.3043716477963	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGATCTCCTGTTTTCC	7091	False	NA	NA	False	TTTAAA	-23	NA	136495842	136584221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
Isoform_158635_35	chr6	+	4231	15	NIC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-1	-1251	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	55.9380123394619	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTCCCTGAACAATTCAA	7091	False	NA	10	True	AATAAA	-18	NA	136495842	136584066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_136495962_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
Isoform_158637_16	chr6	+	4241	15	NIC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	7	-1233	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	51.1530815797254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCGGGGTTTTGAAAT	8857	False	NA	28	True	AATAAA	-36	NA	136509931	136584084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
Isoform_158639_4	chr6	+	4233	15	NIC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	69	-1179	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	51.1530815797254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTGGGGAATATGTAT	8919	False	NA	82	True	NA	NA	NA	136509993	136584138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
Isoform_158643_1297	chr6	+	1755	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	53	842	53	414	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATAATTTTTCTCTTT	NA	False	NA	83	True	AATAAA	-10	NA	137712128	137728088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
Isoform_158646_299	chr6	+	2591	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	53	6	53	-6	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAGTCGCTTGGATTCC	NA	False	NA	17	True	AATAAA	-20	NA	137712128	137728924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
Isoform_158663_506	chr6	+	1729	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	-3	3	-1	-3	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTTTGTTTATT	NA	False	NA	17	True	AATACA	-17	NA	137731552	137814889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
Isoform_158677_3	chr6	+	4299	26	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	19.6910538062339	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTGGTGTTAGAATCT	NA	False	NA	15	True	AATAAA	-15	NA	140369774	140542834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525152_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
Isoform_158679_3	chr6	+	4317	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-126	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	22.1014076977513	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTGGTGTTAGAATCT	NA	False	NA	15	True	AATAAA	-15	NA	140369653	140542834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525152_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
Isoform_158680_3	chr6	+	4396	27	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-22	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	24.6783149904776	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTGGTGTTAGAATCT	NA	False	NA	15	True	AATAAA	-15	NA	140369863	140542834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526072_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
Isoform_158682_3	chr6	+	4295	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-111	-2700	combination_of_known_junctions	FALSE	canonical	3	61	junction_24	12.1857726696158	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGAGTGAGAATCTAT	NA	False	NA	NA	False	AGTAAA	-14	NA	140369668	140540136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280
Isoform_158683_49	chr6	+	4402	26	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-111	-2	combination_of_known_junctions	FALSE	canonical	3	61	junction_24	11.9895954894233	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTGGTGTTAGAATCT	NA	False	NA	15	True	AATAAA	-15	NA	140369668	140542834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
Isoform_158688_15	chr6	+	4310	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-123	-3	combination_of_known_junctions	FALSE	canonical	3	34	junction_24	15.4811152878452	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGGTGTTAGAATC	NA	False	NA	14	True	AATAAA	-14	NA	140369656	140542833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
Isoform_158689_5	chr6	+	4318	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-131	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	20.8844373211782	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCACTGGTGTTAGAAT	NA	False	NA	13	True	AATAAA	-13	NA	140369648	140542832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
Isoform_158690_13	chr6	+	3328	8	FSM	ENSMUSG00000030232.19	ENSMUST00000032359.15	5932	8	-51	2655	-51	0	multi-exon	FALSE	canonical	3	55	junction_1	98.0522559554811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAAATTGTAACAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	140568337	140598552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_140568785_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
Isoform_158696_258	chr6	+	3686	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	40	1	40	-1	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTCAAATTGTAACAATT	NA	False	NA	NA	False	AATAAA	-19	NA	140569264	140598551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
Isoform_158698_13	chr6	+	3624	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	-13	116	-13	-116	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTACTAGTATTTTT	NA	False	NA	NA	False	AATAGA	-15	NA	140569211	140598436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
Isoform_1587_36	chr10	-	1512	8	FSM	ENSMUSG00000040006.14	ENSMUST00000039763.14	1557	8	37	8	11	1	multi-exon	TRUE	canonical	3	22	junction_3	111.32321026119	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAATTGCTTTATTTT	7500	False	NA	-9	True	AATAAA	-9	NA	7656644	7643718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7644350_7646120_7646285_7649061_7649193_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
Isoform_158702_30	chr6	+	4683	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	12	-968	12	-624	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTCACATGTGTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	140569236	140599520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
Isoform_158704_8	chr6	+	6203	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	-1	-2475	-1	-180	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTCCTCAGGACCTG	NA	False	NA	NA	False	AATAAA	-25	NA	140569223	140601027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
Isoform_158707_198	chr6	+	3195	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAAATTGTAACAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	140569223	140598552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
Isoform_158708_54	chr6	+	4150	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	12	-624	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTCACATGTGTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	140569236	140599520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
Isoform_158720_6	chr6	+	2206	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	-7	632	-7	574	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGAAGTTGTTTCAAA	NA	False	NA	NA	False	AATACA	-15	NA	142291372	142308351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
Isoform_158721_55	chr6	+	1724	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	4	1103	4	103	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGTTTAATGACTCATTT	NA	False	NA	13	True	AATAAA	-18	NA	142291383	142307880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
Isoform_158723_5	chr6	+	1784	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	-57	1104	-57	102	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGTTTAATGACTCATT	NA	False	NA	12	True	AATAAA	-17	NA	142291322	142307879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
Isoform_158724_4	chr6	+	3805	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	2	-976	2	976	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTAGACCAGCACAGACAC	NA	False	NA	NA	False	NA	NA	NA	142291381	142309959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
Isoform_158726_559	chr6	+	2814	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	4	0	4	0	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332950	142349584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
Isoform_158733_21	chr6	+	2519	4	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	296.330146214582	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332950	142349584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_142333096_142341913_142341996_142347268_142349209_142349232
Isoform_158737_68	chr6	+	3524	7	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	63	1054	-5	-4	5prime_fragment	FALSE	canonical	3	691	junction_3	53.4189417092227	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTATTGTGTGAGTTT	NA	False	NA	5	True	ATTAAA	-16	NA	142702474	142720386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
Isoform_158738_19	chr6	+	3555	7	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	34	1052	34	-2	5prime_fragment	FALSE	canonical	3	691	junction_3	53.4189417092227	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTGTGAGTTTGA	NA	False	NA	7	True	ATTAAA	-18	NA	142702445	142720388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
Isoform_158742_586	chr6	+	1694	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	60	6	-8	-6	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGTTTCTGTACTGTA	NA	False	NA	27	True	AATAAA	-16	NA	142702471	142721434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
Isoform_158744_157	chr6	+	1720	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	34	6	34	-6	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGTTTCTGTACTGTA	NA	False	NA	27	True	AATAAA	-16	NA	142702445	142721434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
Isoform_158749_272	chr6	+	6404	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	28	1	4	-1	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCCATGTGGTTCATA	NA	False	NA	24	True	AATAAA	-37	NA	143112983	143154271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
Isoform_158754_8	chr6	+	6508	9	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	0	-2	intron_retention	FALSE	canonical	2	6	junction_4	112.716943602104	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCATGTGGTTCAT	NA	False	NA	23	True	AATAAA	-36	NA	143112979	143154270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143138586_143138688_143140957_143141042_143143130_143143292_143148804_143148879_143149109
Isoform_158764_13	chr6	+	2336	19	FSM	ENSMUSG00000030263.14	ENSMUST00000032396.13	2319	19	-23	6	-23	0	multi-exon	FALSE	canonical	3	14	junction_2	13.9594872380979	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145067441	145120654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145067833_145083185_145083334_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
Isoform_158766_4	chr6	+	2830	19	NIC	ENSMUSG00000030263.14	novel	2319	19	NA	NA	-34	-2	intron_retention	FALSE	canonical	3	7	junction_2	14.613540144522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGGCTGGAACGCCTG	NA	False	NA	15	True	AATAAA	-20	NA	145067430	145120658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_145067833_145083185_145083813_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
Isoform_158767_4	chr6	+	2590	19	NIC	ENSMUSG00000030263.14	novel	2319	19	NA	NA	163	3	intron_retention	FALSE	canonical	3	7	junction_2	14.613540144522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGGCTGGAACGCCT	NA	False	NA	14	True	AATAAA	-19	NA	145067669	145120657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_145067833_145083185_145083813_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
Isoform_158768_20	chr6	+	1760	17	FSM	ENSMUSG00000030263.14	ENSMUST00000132948.2	1761	17	1	0	1	0	multi-exon	FALSE	canonical	1	3	junction_1	14.1684894660652	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145091203	145120654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145091249_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
Isoform_158771_17	chr6	+	1362	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111721.2	1336	3	-28	2	2	-2	multi-exon	TRUE	canonical	3	42	junction_1	139.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTAAAGGAGTCTTTA	NA	False	NA	12	True	NA	NA	NA	145156883	145162263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145156971_145160909_145160998_145161076
Isoform_158772_6	chr6	+	1618	4	FSM	ENSMUSG00000040370.14	ENSMUST00000111724.8	1618	4	-2	2	-2	-2	multi-exon	TRUE	canonical	3	14	junction_1	142.199390528464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTAAAGGAGTCTTTA	NA	False	NA	12	True	NA	NA	NA	145156898	145162263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145156979_145160247_145160511_145160909_145160998_145161076
Isoform_158775_103	chr6	+	1329	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	42	3	-2	-3	multi-exon	FALSE	canonical	3	230	junction_1	45.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTAAAGGAGTCTTT	NA	False	NA	11	True	NA	NA	NA	145156923	145162262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145156979_145160909_145160998_145161076
Isoform_158777_6	chr6	+	2327	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	42	-995	-2	595	multi-exon	FALSE	canonical	3	230	junction_1	45.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAGTTAAATTTTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	145156923	145163260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145156979_145160909_145160998_145161076
Isoform_158779_6	chr6	+	853	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	51	-5	51	5	multi-exon	FALSE	canonical	3	46	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGATTCTGACTTGTTT	NA	False	NA	11	True	NA	NA	NA	145196305	145197580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145196516_145196937
Isoform_158780_6	chr6	+	913	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	-5	-9	-5	9	multi-exon	FALSE	canonical	3	46	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTCTGACTTGTTTTGTT	NA	False	NA	15	True	NA	NA	NA	145196249	145197584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145196516_145196937
Isoform_158781_6	chr6	+	1096	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	-188	-9	-188	9	multi-exon	FALSE	canonical	3	46	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTCTGACTTGTTTTGTT	NA	False	NA	15	True	NA	NA	NA	145196066	145197584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145196516_145196937
Isoform_158783_1903	chr6	+	1509	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	264	2	264	-2	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	1903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTGCTTCCCTGTGTG	NA	False	NA	14	True	AATAAA	-34	NA	145561746	145567203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
Isoform_158784_35	chr6	+	1579	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	193	3	193	-3	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACATTTGCTTCCCTGTGT	NA	False	NA	13	True	AATAAA	-33	NA	145561675	145567202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
Isoform_158792_16	chr6	+	5450	5	FSM	ENSMUSG00000030259.13	ENSMUST00000111704.8	5446	5	0	-4	0	4	multi-exon	FALSE	canonical	2	4	junction_4	5.44862367942584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGCTTGCTTTCTTAT	NA	False	NA	NA	False	AATAAA	-27	NA	145692473	145766809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_145692693_145754109_145754289_145760778_145761669_145762223_145762369_145762792
Isoform_158793_3	chr6	+	5640	6	NNC	ENSMUSG00000030259.13	novel	5446	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.48074069840786	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTGTTGCTTGCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	145692470	145766805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_145692693_145696217_145696409_145754109_145754289_145760778_145761669_145762223_145762369_145762792
Isoform_158795_119	chr6	+	907	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	7	4	7	-4	multi-exon	FALSE	canonical	0	0	junction_3	170.445005793658	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACGGTGTGCTTTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	146479425	146494359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
Isoform_158797_240	chr6	+	2803	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	77	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCAGGGTTAATTT	NA	False	NA	29	True	AATAAA	-20	NA	146479433	146500696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
Isoform_1588_356	chr10	-	1514	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	11	0	11	0	multi-exon	FALSE	canonical	3	252	junction_3	35.482102415679	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	7500	False	NA	-10	True	AATAAA	-8	NA	7656644	7643719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
Isoform_158802_9	chr6	+	5192	7	NNC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	176.025250713893	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	28	True	AATAAA	-19	NA	146479448	146500695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146495161_146495183_146496788_146498792
Isoform_158804_86	chr6	+	2695	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	70	1	8	-1	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	28	True	AATAAA	-19	NA	146479426	146500695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
Isoform_158807_181	chr6	+	771	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	43	0	-1	0	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTTTGTTTGTCCTT	NA	False	NA	36	True	AATAAA	-21	NA	146544087	146552100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
Isoform_158809_177	chr6	+	2296	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-4	2258	-4	-2	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGATCAGTCAATGG	NA	False	NA	9	True	ATTAAA	-19	NA	146626488	146678052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
Isoform_158810_6	chr6	+	3838	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-58	770	-58	-770	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCAGTTGTTCACAGCT	NA	False	NA	NA	False	ATTAAA	-11	NA	146626434	146679540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
Isoform_158812_51	chr6	+	4574	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-31	7	-31	-7	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTGTTGGTGGGGTGT	NA	False	NA	8	True	AATAAA	-13	NA	146626461	146680303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
Isoform_158814_5	chr6	+	2121	12	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-27	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	45.7221215244242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTGATCAGTCAATG	NA	False	NA	8	True	ATTAAA	-18	NA	146626465	146678051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_146626546_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
Isoform_158817_18	chr6	+	2155	9	ISM	ENSMUSG00000040187.16	ENSMUST00000129788.8	1664	15	14875	-887	-26	4	3prime_fragment	FALSE	canonical	0	0	junction_7	1.49478259288767	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCCTTTCTGAAGAGT	NA	False	NA	NA	False	TTTAAA	-9	NA	146721902	146735031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_146722167_146723407_146723649_146724086_146724194_146724591_146724743_146726664_146726727_146728713_146728823_146729596_146729685_146731190_146731300_146734007
Isoform_158818_3	chr6	+	2118	9	ISM	ENSMUSG00000040187.16	ENSMUST00000111638.8	1710	15	14872	-877	-29	1	3prime_fragment	FALSE	canonical	0	0	junction_7	1.53602571593056	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGCCTATTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	146721899	146735021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_146722167_146723407_146723649_146724086_146724194_146724621_146724743_146726664_146726727_146728713_146728823_146729596_146729685_146731190_146731300_146734007
Isoform_158820_13	chr6	+	5009	29	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	35	junction_16	87.8358278441162	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7572	False	NA	13	True	AATAAA	-17	NA	146790017	146933523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
Isoform_158822_88	chr6	+	4979	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	49	junction_2	70.7910234325529	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7572	False	NA	13	True	AATAAA	-17	NA	146790017	146933523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
Isoform_158825_80	chr6	+	4872	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	1	35	junction_15	73.2858432087318	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7546	False	NA	11	True	AATAAA	-15	NA	146789991	146933521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
Isoform_158829_437	chr6	+	4818	27	FSM	ENSMUSG00000016487.16	ENSMUST00000016631.14	4851	27	33	0	11	0	multi-exon	FALSE	canonical	1	79	junction_5	45.7139938177494	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7572	False	NA	13	True	AATAAA	-17	NA	146790017	146933523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
Isoform_158842_607	chr6	+	1062	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	9	3091	9	1	multi-exon	FALSE	canonical	3	595	junction_4	51.0230040155958	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATTGTCTTACGTCAG	NA	False	NA	13	True	TATAAA	-15	NA	146944270	146972398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
Isoform_158854_30	chr6	+	6137	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	127	3	127	-3	multi-exon	FALSE	canonical	3	50	junction_2	10.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTGATGTGTGTGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	146993003	147014273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146993866_147003063_147003258_147009192
Isoform_158856_5	chr6	+	6193	4	NNC	ENSMUSG00000040102.11	novel	6267	3	NA	NA	50	-3	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_3	24.8596057893121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTGATGTGTGTGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	146992926	147014273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_146993866_147003063_147003258_147009192_147010406_147010426
Isoform_158858_34	chr6	+	2294	13	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	22.1514672200286	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGATTGTCATGTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	147377368	147534109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_147377394_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
Isoform_158859_7	chr6	+	2543	14	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	30.2488691167164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGCTTGATTGTCAT	NA	False	NA	10	True	AATAAA	-11	NA	147377365	147534103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_147377558_147409281_147409326_147412321_147412401_147434773_147434862_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
Isoform_158860_250	chr6	+	2426	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	33	0	33	0	multi-exon	FALSE	canonical	3	65	junction_1	9.07683253612673	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	147377401	147534110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
Isoform_158862_7	chr6	+	2358	12	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	24.9014586847457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGATTGTCATGTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	147377390	147534109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
Isoform_158865_5	chr6	+	1774	2	FSM	ENSMUSG00000085355.3	ENSMUST00000154673.2	1747	2	-32	5	-32	3	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCCATTCAGTAATTCCG	NA	False	NA	NA	False	AATAAA	-15	NA	148846332	148848622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_148847919_148848434
Isoform_158866_4	chr6	+	1622	5	FSM	ENSMUSG00000039958.18	ENSMUST00000111551.2	1558	5	-72	8	0	-3	multi-exon	FALSE	canonical	1	2	junction_2	10.2316909648406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATAAATAAGGAACTCAA	NA	False	NA	NA	False	NA	NA	NA	149043071	149052661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_149043203_149044103_149044214_149045512_149045941_149048655_149048787_149051839
Isoform_158867_13	chr6	+	1331	3	FSM	ENSMUSG00000039958.18	ENSMUST00000111548.8	1398	3	62	5	4	-5	multi-exon	FALSE	canonical	3	12	junction_2	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAACTTGGGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	149043075	149046625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_149043203_149044103_149044214_149045531
Isoform_158868_11	chr6	+	1581	5	FSM	ENSMUSG00000039958.18	ENSMUST00000134306.8	848	5	32	-765	22	-3	multi-exon	FALSE	canonical	3	12	junction_2	6.86931583201704	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATAAATAAGGAACTCAA	NA	False	NA	NA	False	NA	NA	NA	149043093	149052661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_149043203_149044103_149044214_149045531_149045941_149048655_149048787_149051839
Isoform_158871_28	chr6	+	6149	7	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	89.5693399923583	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTACAGTTTAAGTCT	NA	False	NA	2	True	AATAAA	-14	NA	149210957	149237151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_149211403_149211819_149211858_149219132_149219207_149226229_149226299_149226902_149231283_149232923_149233005_149236089
Isoform_158873_10	chr6	+	6067	6	NIC	ENSMUSG00000032712.17	novel	5269	5	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	99.8570978949419	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTACAGTTTAAGTCT	NA	False	NA	2	True	AATAAA	-14	NA	149210970	149237151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_149211403_149211819_149211858_149219132_149219207_149226902_149231283_149232923_149233005_149236089
Isoform_158874_7	chr6	+	6117	6	NIC	ENSMUSG00000032712.17	novel	5269	5	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	99.8570978949419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAGTTTAAGTCTTCAT	NA	False	NA	6	True	AATAAA	-18	NA	149210924	149237155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_149211403_149211819_149211858_149219132_149219207_149226902_149231283_149232923_149233005_149236089
Isoform_158875_6	chr6	+	6077	6	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	99.7344474091074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTACAGTTTAAGTCT	NA	False	NA	2	True	AATAAA	-14	NA	149210955	149237151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_149211403_149211819_149211858_149226229_149226299_149226902_149231283_149232923_149233005_149236089
Isoform_158883_8	chr6	+	6154	7	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	80.8489675602327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTACAGTTTAAGTCT	NA	False	NA	2	True	AATAAA	-14	NA	149210970	149237151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226229_149226299_149226902_149231283_149232923_149233005_149236089
Isoform_158888_19	chr6	+	6136	6	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_3	89.6852273231216	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149210924	149237156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226902_149231283_149232923_149233005_149236089
Isoform_158893_21	chr6	+	6094	6	FSM	ENSMUSG00000032712.17	ENSMUST00000100765.11	5356	6	-16	-722	2	-6	multi-exon	FALSE	canonical	3	26	junction_2	93.1227147370608	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTACAGTTTAAGTC	NA	False	NA	1	True	AATAAA	-13	NA	149210955	149237150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_149211403_149211819_149211876_149226229_149226299_149226902_149231283_149232923_149233005_149236089
Isoform_158896_23	chr6	+	6027	5	FSM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	28	11	0	-6	multi-exon	FALSE	canonical	3	27	junction_2	95.7405347802069	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTACAGTTTAAGTC	NA	False	NA	1	True	AATAAA	-13	NA	149210953	149237150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_149211403_149211819_149211876_149226902_149231283_149232923_149233005_149236089
Isoform_158899_12	chr6	+	6060	5	FSM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	-1	7	-1	-2	multi-exon	FALSE	canonical	3	27	junction_2	95.7405347802069	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAGTTTAAGTCTTCA	NA	False	NA	5	True	AATAAA	-17	NA	149210924	149237154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_149211403_149211819_149211876_149226902_149231283_149232923_149233005_149236089
Isoform_158921_3	chr6	+	3150	9	FSM	ENSMUSG00000003452.16	ENSMUST00000086829.11	9667	9	86	6431	1	167	multi-exon	FALSE	canonical	3	5	junction_7	6.68487097856047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTTCGTGTGATCAATT	236	False	NA	NA	False	AATAAA	-10	NA	149310567	149458396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149451847_149451924_149458141
Isoform_158922_1480	chr6	+	2202	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	934	0	at_least_one_novel_splicesite	FALSE	canonical	3	602	junction_1	2063.97825139274	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	4722	False	NA	NA	False	AATAAA	-17	NA	117884743	117902583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117900668
Isoform_158927_305	chr6	+	2197	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	978	0	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_1	2283.97154097856	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	4766	False	NA	NA	False	AATAAA	-17	NA	117884787	117902583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_117884880_117894430_117894560_117896059_117896121_117900668
Isoform_158931_9	chr6	+	1463	10	NNC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-49	-45620	at_least_one_novel_splicesite	FALSE	canonical	2	90	junction_1	75.6161521709205	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTGTTTTTTACT	124	False	NA	NA	False	AATAAA	-16	NA	49372488	49400666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309
Isoform_158932_41	chr6	+	3195	24	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-64	1	at_least_one_novel_splicesite	FALSE	canonical	2	90	junction_1	54.4319696453353	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	109	False	NA	NA	False	AATAAA	-23	NA	49372473	49446436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_158933_11	chr6	+	3059	23	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-49	3	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_21	66.1650827991485	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTCATATTCTTTGCA	124	False	NA	NA	False	AATAAA	-25	NA	49372488	49446438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
Isoform_158935_48	chr6	+	2650	22	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-53	1	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_6	55.816430581886	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	120	False	NA	NA	False	AATAAA	-23	NA	49372484	49446436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_158936_4	chr6	+	2534	21	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-59	2	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_19	68.9958513245543	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTCATATTCTTTGC	114	False	NA	NA	False	AATAAA	-24	NA	49372478	49446437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
Isoform_158937_6	chr6	+	2542	21	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-61	1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	64.4351612087686	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	112	False	NA	NA	False	AATAAA	-23	NA	49372476	49446436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_158938_35	chr6	+	2381	20	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-64	-2	at_least_one_novel_splicesite	TRUE	canonical	2	62	junction_6	56.8725064900417	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAAATCATTCATATTC	109	False	NA	NA	False	AATAAA	-19	NA	49372473	49446432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_158941_16	chr6	+	575	3	Intergenic	novelGene_9654	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	85	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTGGTGATTTTCTGT	NA	False	NA	4	True	AATAAA	-18	NA	125409631	125435802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125409775_125409999_125410201_125435571
Isoform_158942_10	chr6	+	676	4	Intergenic	novelGene_9650	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	60.7417118260224	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAACTCTGGTGATT	NA	False	NA	-2	True	AATAAA	-12	NA	125409631	125435796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125409775_125409999_125410201_125434610_125434718_125435571
Isoform_158943_12	chr6	+	563	4	Intergenic	novelGene_9655	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	60.7417118260224	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAACTCTGGTGATT	NA	False	NA	-2	True	AATAAA	-12	NA	125409744	125435796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125409775_125409999_125410201_125434610_125434718_125435571
Isoform_158945_9	chr6	+	934	4	Intergenic	novelGene_9653	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	70.1046836286041	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTCTGGTGATTTTCT	NA	False	NA	2	True	AATAAA	-16	NA	125409631	125435800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125409775_125409999_125410201_125434610_125434718_125435317
Isoform_158949_6	chr6	+	690	4	Intergenic	novelGene_9651	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	73.0585761944178	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAACTCTGGTGATT	NA	False	NA	-2	True	AATAAA	-12	NA	125409631	125435796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125409775_125409999_125410201_125415223_125415345_125435571
Isoform_158950_12	chr6	+	797	5	Intergenic	novelGene_9652	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_3	59.9437236080643	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAACTCTGGTGATT	NA	False	NA	-2	True	AATAAA	-12	NA	125409631	125435796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125409775_125409999_125410201_125415223_125415345_125434610_125434718_125435571
Isoform_158951_70	chr6	+	1518	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8366	-756	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCCTCTTTCTTTGTGT	NA	False	NA	4	True	AATATA	-15	NA	121179288	121203057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
Isoform_158952_3	chr6	+	1624	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8474	-758	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGCCTCTTTCTTTGT	NA	False	NA	2	True	AATATA	-13	NA	121179180	121203055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
Isoform_158953_4	chr6	+	2278	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8365	5	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTGTACAGTTCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	121179289	121203818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
Isoform_158954_28	chr6	+	1472	7	NNC	ENSMUSG00000030060.15	novel	1572	6	NA	NA	-194	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	526.39858683532	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	2770	False	NA	24	True	AATAAA	-10	NA	87890722	87913591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_87890828_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
Isoform_158955_45	chr6	+	1420	7	NNC	ENSMUSG00000030060.15	novel	1572	6	NA	NA	-143	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	526.39858683532	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAACCTTGGCTGGCAAG	2821	False	NA	23	True	AATAAA	-9	NA	87890773	87913590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_87890828_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
Isoform_158957_12	chr6	+	4571	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16100	2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	19.3612854686872	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGACCAGTTGTGTC	4135	False	NA	7	True	ATTAAA	-18	NA	97933978	97998312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_97934147_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
Isoform_158958_9	chr6	+	4554	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16097	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	18.3059928711884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTTGACCAGTTGTG	4132	False	NA	5	True	ATTAAA	-16	NA	97933975	97998310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_97934147_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
Isoform_158960_25	chr6	+	6402	43	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	123	1	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_1	74.8991347445852	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACAAATGTGTGGT	NA	False	NA	NA	False	AATAAA	-11	NA	35154686	35224526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
Isoform_158961_12	chr6	+	6453	43	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	72	1	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_1	74.8991347445852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACAAATGTGTGGT	NA	False	NA	NA	False	AATAAA	-11	NA	35154635	35224526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
Isoform_158962_15	chr6	+	1187	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	359	-4	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGCTCACGGGCAT	8090	False	NA	NA	False	TTTAAA	-6	NA	122499816	122506245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
Isoform_158963_32	chr6	+	544	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	348	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTTTGCTGATTTCT	8079	False	NA	4	True	AATACA	-15	NA	122499805	122505591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
Isoform_158964_35	chr6	+	1171	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	921.93755719951	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986215	87005439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_86986353_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_158966_30	chr6	+	1310	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	935.045821069748	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986215	87005439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_86986492_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_158978_3	chr6	+	2726	2	Fusion	ENSMUSG00000107761.2_ENSMUSG00000067714.14	novel	1393	2	NA	NA	32	-583	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGACTTTGGTCTTTT	5070	False	NA	2	True	NA	NA	NA	125044914	125060409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr6_+_125045331_125058099
Isoform_158982_3	chr6	+	2477	3	NNC	ENSMUSG00000040370.14	novel	1374	3	NA	NA	-3	596	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	145	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGTTAAATTTTTATTG	NA	False	NA	NA	False	AATAAA	-23	NA	145156922	145163261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_145157127_145160909_145160998_145161076
Isoform_158983_13	chr6	+	1478	3	NNC	ENSMUSG00000040370.14	novel	1374	3	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	145	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTAAAGGAGTCTTT	NA	False	NA	11	True	NA	NA	NA	145156922	145162262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_145157127_145160909_145160998_145161076
Isoform_158985_9	chr6	+	5180	18	NNC	ENSMUSG00000029772.18	novel	5152	17	NA	NA	-195	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	30.0608379663434	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCCTGAGAATACCA	7329	False	NA	9	True	AATAAA	-17	NA	29768246	29912309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_29768336_29768548_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
Isoform_158986_7	chr6	+	2803	2	Antisense	novelGene_ENSMUSG00000057691.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATCTTGTTGATGTCATT	NA	False	NA	NA	False	NA	NA	NA	48042879	48062142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_48042985_48059444
Isoform_158987_8	chr6	+	1994	10	NNC	ENSMUSG00000030041.10	novel	607	2	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	229.298931528256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82923936	83007163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_82924038_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
Isoform_15899_546	chr11	-	4133	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-57	1818	-57	978	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078764	97052357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
Isoform_158996_6	chr6	+	1655	3	Intergenic	novelGene_9263	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGACTGTATTGCTTAC	NA	False	NA	22	True	ATTAAA	-22	NA	37419445	37424336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_37419969_37422999_37423146_37423350
Isoform_158998_3	chr6	+	474	2	Intergenic	novelGene_9214	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACGTGTATAATGTGTAT	NA	False	NA	8	True	AATAAA	-18	NA	29639100	29642168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29639206_29641799
Isoform_15900_827	chr11	-	4105	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-29	1818	-29	978	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078736	97052357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
Isoform_159000_4	chr6	+	3070	2	NNC	ENSMUSG00000073018.7	novel	2874	2	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGTGATGTGATT	NA	False	NA	11	True	NA	NA	NA	71270786	71279864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_71271077_71277084
Isoform_159002_3	chr6	+	1515	11	NNC	ENSMUSG00000029798.12	novel	4767	23	NA	NA	27045	-1556	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	5.18555686498567	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAATTCTGTAAAACA	5041	False	NA	NA	False	AATAAA	-20	NA	57614855	57640061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_57614910_57623111_57623217_57624049_57624158_57629016_57629155_57631373_57631518_57634993_57635161_57636660_57636725_57637075_57637147_57639050_57639235_57639327_57639431_57639684
Isoform_159005_6	chr6	+	4241	11	NNC	ENSMUSG00000003154.16	novel	693	5	NA	NA	-32	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.47584804016684	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	9306	False	NA	54	True	NA	NA	NA	122803601	122822304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_122803638_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
Isoform_159007_3	chr6	+	2362	8	NNC	ENSMUSG00000060477.15	novel	573	2	NA	NA	5683	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.87400787401181	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGCTGTCTTATAATTT	1819	False	NA	9	True	AATAAA	-14	NA	113652421	113671970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_113652468_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
Isoform_159011_5	chr6	+	1574	8	NNC	ENSMUSG00000049037.9	novel	1558	6	NA	NA	-695	-13	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	8.11398389780739	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGATCTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122898111	122911565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_122898238_122898882_122899039_122901675_122901790_122904922_122905025_122907635_122907788_122909107_122909224_122910736_122911473_122911493
Isoform_159012_3	chr6	+	1950	8	NNC	ENSMUSG00000049037.9	novel	1558	6	NA	NA	-2685	-2	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	7.94624799152765	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGTAAACTAGGA	NA	False	NA	NA	False	NA	NA	NA	122896121	122911576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_122896613_122898882_122899039_122901675_122901790_122904922_122905025_122907635_122907788_122909107_122909224_122910736_122911473_122911493
Isoform_159013_4	chr6	+	4511	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	21686	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.5751398775266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTTGACCAGTTGTG	9721	False	NA	5	True	ATTAAA	-16	NA	97939564	97998310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_97939693_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
Isoform_159020_3	chr6	+	1596	3	NNC	ENSMUSG00000035104.15	novel	515	3	NA	NA	285	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCTTCGTGTCTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	82018308	82070078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_82018413_82048035_82048224_82068774
Isoform_159021_3	chr6	+	1628	3	NNC	ENSMUSG00000034456.16	novel	3370	20	NA	NA	27958	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAAAAGGAACCAGAC	4940	False	NA	NA	False	AATAAA	-10	NA	90338228	90341523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_90338322_90338432_90338533_90340088
Isoform_159022_3	chr6	+	2050	11	NNC	ENSMUSG00000030341.18	novel	2156	10	NA	NA	-720	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.91766101457395	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCGCTGACCCTGG	2695	False	NA	7	True	AATACA	-12	NA	125325604	125339439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_+_125325673_125326851_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
Isoform_159027_4	chr6	+	179	1	Intergenic	novelGene_9331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	42315630	42315809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_42315600_42315800
Isoform_159029_3	chr6	+	174	1	Intergenic	novelGene_9332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGGTTGTTTTTT	1671	False	NA	NA	False	NA	NA	NA	42359983	42360157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_42360000_42360200
Isoform_15903_159	chr11	-	5921	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-29	2	-29	-2	multi-exon	TRUE	canonical	3	682	junction_21	133.681077140662	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGCTGCTTCGTTCT	NA	False	NA	-6	True	AATAAA	-23	NA	97078736	97050541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
Isoform_159031_9	chr6	+	174	1	Intergenic	novelGene_9333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	43313281	43313455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_43313300_43313500
Isoform_159032_25	chr1	+	173	1	Intergenic	novelGene_462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	149164922	149165095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_149164900_149165100
Isoform_159034_4	chr6	-	162	1	Intergenic	novelGene_9334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	43683580	43683418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_43683400_43683600
Isoform_159037_4	chr6	+	251	1	Intergenic	novelGene_9335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCCCCAACCATGACCAA	NA	False	NA	NA	False	NA	NA	NA	46729659	46729910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_46729700_46729900
Isoform_159039_7	chr6	-	4284	1	Intergenic	novelGene_9336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGGTCTGCTAGTG	NA	False	NA	-3	True	ATTAAA	-16	NA	47167375	47163091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_47163100_47167400
Isoform_159042_6	chr6	-	176	1	Intergenic	novelGene_9337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	47198948	47198772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_47198800_47198900
Isoform_159043_19	chr6	-	163	1	Intergenic	novelGene_9338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTTTTTAAAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	47317296	47317133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_47317100_47317300
Isoform_159044_32	chr6	+	170	1	Intergenic	novelGene_9339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	47324450	47324620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_47324400_47324600
Isoform_159045_63	chr6	+	218	1	Intergenic	novelGene_9340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTAGGAGTCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	47387418	47387636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_47387400_47387600
Isoform_159047_4	chr6	-	3580	1	Genic_Genomic	ENSMUSG00000052241.4	novel	NA	NA	NA	NA	-752	2283	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCATGTTCCTTCTGTCC	NA	False	NA	NA	False	AATAAA	-26	NA	47432006	47428426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_47428400_47432000
Isoform_159048_11	chr6	-	2668	1	Genic_Genomic	ENSMUSG00000052241.4	novel	NA	NA	NA	NA	-736	1387	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGATTCGCCCTGCCTC	NA	False	NA	NA	False	AATACA	-25	NA	47431990	47429322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_47429300_47432000
Isoform_159050_83	chr6	+	175	1	Intergenic	novelGene_9341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTTAAATTATAT	5342	False	NA	NA	False	NA	NA	NA	47460345	47460520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_47460300_47460500
Isoform_159055_3	chr6	+	2862	1	Antisense	novelGene_ENSMUSG00000029687.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAATAAAATATAGAAG	NA	False	NA	NA	False	NA	NA	NA	47572082	47574944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_47572100_47574900
Isoform_159057_6	chr6	+	175	1	Intergenic	novelGene_9342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAGTAGATTTAAT	NA	False	NA	NA	False	NA	NA	NA	47583922	47584097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_47583900_47584100
Isoform_159059_13	chr6	-	180	1	Intergenic	novelGene_9343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	47607177	47606997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_47607000_47607200
Isoform_159076_3	chr6	+	304	1	Intergenic	novelGene_9345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAGAA	9040	False	NA	NA	False	NA	NA	NA	47790698	47791002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_47790700_47791000
Isoform_159077_59	chr6	-	177	1	Intergenic	novelGene_9346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47834842	47834665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_47834700_47834800
Isoform_159082_33	chr6	-	182	1	Intergenic	novelGene_9347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGCATTA	NA	False	NA	NA	False	NA	NA	NA	47890749	47890567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_47890600_47890700
Isoform_159084_8	chr6	+	2524	1	NIC	ENSMUSG00000052763.8	novel	2801	5	NA	NA	132	-4015	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	47897541	47900065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_47897500_47900100
Isoform_159087_50	chr6	+	198	1	Intergenic	novelGene_9348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAATGGAAACTGG	NA	False	NA	NA	False	NA	NA	NA	47916320	47916518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_47916300_47916500
Isoform_159088_6	chr6	+	172	1	Intergenic	novelGene_9349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTCAAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	47917267	47917439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_47917300_47917400
Isoform_159089_4	chr6	-	306	1	Intergenic	novelGene_9350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTTAAAAAATATAAAGTA	NA	False	NA	NA	False	NA	NA	NA	47960407	47960101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_47960100_47960400
Isoform_159094_3	chr6	+	2819	1	Antisense	novelGene_ENSMUSG00000057691.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAAGATAACAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	48042877	48045696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_48042900_48045700
Isoform_159096_18	chr6	+	174	1	Intergenic	novelGene_9351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAACAAAAGA	NA	False	NA	NA	False	NA	NA	NA	48336531	48336705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_48336500_48336700
Isoform_159102_3	chr6	+	499	1	ISM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	22605	856	4855	-856	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCACCGTAAGTGGTTC	NA	False	NA	NA	False	AATAAA	-14	NA	48395124	48395623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_48395100_48395600
Isoform_159103_13	chr6	-	176	1	Intergenic	novelGene_9352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGATGTTCATAA	NA	False	NA	NA	False	NA	NA	NA	48479517	48479341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_48479300_48479500
Isoform_159104_4	chr6	-	632	1	Intergenic	novelGene_9353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAAGGGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	48499957	48499325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_48499300_48500000
Isoform_159105_10	chr5	-	216	1	FSM	ENSMUSG00000094664.2	ENSMUST00000148282.2	333	1	-61	178	-61	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAAAAAACAATACAGTGA	4036	False	NA	NA	False	NA	NA	NA	123393937	123393721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_123393700_123393900
Isoform_159106_3526	chr6	+	429	1	FSM	ENSMUSG00000095526.3	ENSMUST00000117571.2	333	1	-61	-35	-61	35	mono-exon	FALSE	NA	NA	NA	NA	NA	3526	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	48500390	48500819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_48500400_48500800
Isoform_159108_32	chr6	-	1170	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-14	-619	-14	619	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAAATTCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	48502038	48500868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48500900_48502000
Isoform_159109_44	chr6	-	844	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-14	-293	-14	293	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATTGCATATTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	48502038	48501194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48501200_48502000
Isoform_159110_75	chr6	-	736	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-18	-181	-18	181	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAATTTATGTTTTATA	NA	False	NA	NA	False	AATAAA	-17	NA	48502042	48501306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_48501300_48502000
Isoform_159119_3	chr6	+	3677	1	Antisense	novelGene_ENSMUSG00000029752.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7688792	7692469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_7688800_7692500
Isoform_159121_4	chr6	-	176	1	Intergenic	novelGene_9354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	48870821	48870645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_48870600_48870800
Isoform_159123_3	chr6	+	176	1	Intergenic	novelGene_9356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAACAAAGAG	NA	False	NA	NA	False	NA	NA	NA	49018092	49018268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_49018100_49018300
Isoform_159134_163	chr6	+	173	1	Intergenic	novelGene_9357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACCCC	NA	False	NA	NA	False	NA	NA	NA	49135001	49135174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_49135000_49135200
Isoform_159136_11	chr6	+	4514	2	Antisense	novelGene_ENSMUSG00000029814.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTGGAGTGTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	49185153	49189697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_49186131_49186160
Isoform_159137_7	chr6	+	176	1	Intergenic	novelGene_9358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAACAGAGGTAT	NA	False	NA	NA	False	NA	NA	NA	49212702	49212878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_49212700_49212900
Isoform_159143_6	chr6	+	1483	1	Antisense	novelGene_ENSMUSG00000029817.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCGCCCGTGCCGCCA	NA	False	NA	NA	False	NA	NA	NA	49239477	49240960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_49239500_49241000
Isoform_159144_9	chr6	-	1345	1	FSM	ENSMUSG00000029817.12	ENSMUST00000204013.2	3788	1	-3	2446	0	-2446	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGGGAAACAAAAGT	4590	False	NA	NA	False	NA	NA	NA	49240967	49239622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_49239600_49241000
Isoform_159148_28	chr6	-	167	1	Intergenic	novelGene_9359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGAGTTTGAT	3249	False	NA	NA	False	NA	NA	NA	49242308	49242141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_49242100_49242300
Isoform_15915_98	chr11	-	5950	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-59	3	-59	-3	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTGCTGCTTCGTTC	NA	False	NA	-7	True	AATAAA	-22	NA	97078766	97050542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
Isoform_159151_72	chr6	+	174	1	Intergenic	novelGene_9361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49277406	49277580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_49277400_49277600
Isoform_159152_23	chr6	-	177	1	Intergenic	novelGene_9362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	49290617	49290440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_49290400_49290600
Isoform_159153_90	chr6	+	176	1	Intergenic	novelGene_9363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATCTTC	8141	False	NA	NA	False	NA	NA	NA	49327469	49327645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_49327500_49327600
Isoform_159162_817	chr6	-	1606	1	FSM	ENSMUSG00000096403.3	ENSMUST00000178598.3	843	1	-49	-714	-49	714	mono-exon	FALSE	NA	NA	NA	NA	NA	817	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	AATAAA	-19	NA	7983432	7981826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_7981800_7983400
Isoform_159175_6	chr6	-	4518	1	Genic_Genomic	ENSMUSG00000029821.16	novel	NA	NA	NA	NA	-10653	573	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	50181148	50176630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_50176600_50181100
Isoform_159185_43	chr6	+	164	1	Intergenic	novelGene_9182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATATATCTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	8243664	8243828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_8243700_8243800
Isoform_159210_61	chr6	+	175	1	Intergenic	novelGene_9364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGCAAAGATG	3565	False	NA	NA	False	NA	NA	NA	51481041	51481216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_51481000_51481200
Isoform_159212_5	chr6	+	232	1	Intergenic	novelGene_9366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAAGTGCTTTGTCCC	NA	False	NA	NA	False	NA	NA	NA	51498865	51499097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_51498900_51499100
Isoform_159213_15	chr6	-	2311	1	Intergenic	novelGene_9367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTC	NA	False	NA	NA	False	NA	NA	NA	51507009	51504698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_51504700_51507000
Isoform_159215_3	chr6	-	179	1	Antisense	novelGene_ENSMUSG00000038301.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATACTATTG	5342	False	NA	NA	False	NA	NA	NA	51539960	51539781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_51539800_51540000
Isoform_159216_4	chr6	+	189	1	Intergenic	novelGene_9368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAAGGAAA	3885	False	NA	NA	False	NA	NA	NA	51573855	51574044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_51573900_51574000
Isoform_159218_34	chr6	+	177	1	Intergenic	novelGene_9369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATTGAAACTTA	665	False	NA	NA	False	NA	NA	NA	51591444	51591621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_51591400_51591600
Isoform_159219_7	chr6	+	1643	1	Intergenic	novelGene_9370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAACCCAAACCTTCTAC	NA	False	NA	NA	False	NA	NA	NA	51853917	51855560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_51853900_51855600
Isoform_159220_5	chr6	+	2056	1	Genic_Genomic	ENSMUSG00000085412.8	novel	NA	NA	NA	NA	-6	-7190	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAAAAAAAATT	772	False	NA	NA	False	NA	NA	NA	52079922	52081978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_+_52079900_52082000
Isoform_159222_22	chr6	+	169	1	Intergenic	novelGene_9371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAAAGTTTT	1869	False	NA	NA	False	NA	NA	NA	52120270	52120439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_52120300_52120400
Isoform_159226_5	chr6	-	177	1	Intergenic	novelGene_9372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTATCAGAACAG	2907	False	NA	NA	False	NA	NA	NA	52257922	52257745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_52257700_52257900
Isoform_159233_11	chr6	-	241	1	FSM	ENSMUSG00000059159.7	ENSMUST00000118230.2	213	1	51	-79	51	79	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAACATCAAGCCGGGTG	NA	False	NA	NA	False	NA	NA	NA	52323876	52323635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_52323600_52323900
Isoform_159234_18	chr6	+	173	1	Intergenic	novelGene_9373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTTTTAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	52324029	52324202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_52324000_52324200
Isoform_159235_195	chr6	+	174	1	Intergenic	novelGene_9374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52348643	52348817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_52348600_52348800
Isoform_159237_9	chr6	+	179	1	Intergenic	novelGene_9375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAATAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	52461006	52461185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_52461000_52461200
Isoform_159239_11	chr6	-	179	1	Intergenic	novelGene_9376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGAGCAGACAGGGAC	NA	False	NA	NA	False	NA	NA	NA	52687926	52687747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_52687700_52687900
Isoform_159242_6	chr6	+	178	1	Intergenic	novelGene_9378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGGATTGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	53730087	53730265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_53730100_53730300
Isoform_159243_36	chr6	+	175	1	Intergenic	novelGene_9379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATACTA	NA	False	NA	NA	False	NA	NA	NA	54021759	54021934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_54021800_54021900
Isoform_159246_66	chr6	-	223	1	Intergenic	novelGene_9380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTCTGCGGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	54394582	54394359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_54394400_54394600
Isoform_159247_20	chr6	+	178	1	Intergenic	novelGene_9381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATTCATCACATG	1389	False	NA	NA	False	NA	NA	NA	54457593	54457771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_54457600_54457800
Isoform_159249_53	chr6	+	177	1	Intergenic	novelGene_9382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	54560893	54561070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_54560900_54561100
Isoform_159250_14	chr6	-	178	1	Intergenic	novelGene_9383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGATAAACTAT	NA	False	NA	NA	False	NA	NA	NA	54603231	54603053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_54603100_54603200
Isoform_159267_91	chr6	+	169	1	Intergenic	novelGene_9384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTGATACTTG	NA	False	NA	NA	False	NA	NA	NA	54809799	54809968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_54809800_54810000
Isoform_159272_22	chr6	+	186	1	Intergenic	novelGene_9385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAACCAAACAAACC	9261	False	NA	NA	False	NA	NA	NA	54906312	54906498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_54906300_54906500
Isoform_159273_6	chr6	+	2682	1	Antisense	novelGene_ENSMUSG00000038058.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGGCTGAAGGAACCAA	NA	False	NA	NA	False	AATAAA	-18	NA	54920614	54923296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_54920600_54923300
Isoform_159279_15	chr6	-	196	1	Intergenic	novelGene_9386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAATACATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	56025594	56025398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_56025400_56025600
Isoform_159281_4	chr6	+	1396	1	FSM	ENSMUSG00000029787.11	ENSMUST00000205188.2	1414	1	19	-1	-9	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTGCTG	NA	False	NA	NA	False	AGTAAA	-27	NA	56691902	56693298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_56691900_56693300
Isoform_159282_13	chr6	+	176	1	Intergenic	novelGene_9387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGGAAGCACTCAG	5544	False	NA	NA	False	NA	NA	NA	56720554	56720730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_56720600_56720700
Isoform_159291_10	chr6	-	4435	2	Antisense	novelGene_ENSMUSG00000029781.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56814341	56809883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_56811301_56811323
Isoform_159295_74	chr6	-	182	1	Intergenic	novelGene_9388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGACTTAAAAAGTAT	NA	False	NA	-16	True	NA	NA	NA	57513491	57513309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_57513300_57513500
Isoform_159297_92	chr6	+	482	1	FSM	ENSMUSG00000071419.8	ENSMUST00000121788.2	438	1	-11	-33	-11	33	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGGGGGGGGAAGAAG	NA	False	NA	13	True	AATAAA	-20	NA	57994479	57994961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_57994500_57995000
Isoform_159301_5	chr6	-	1881	1	FSM	ENSMUSG00000055430.5	ENSMUST00000059539.5	1844	1	-38	1	-38	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCTGTACTGTCATCTA	NA	False	NA	-2	True	AATAAA	-19	NA	58884099	58882218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_58882200_58884100
Isoform_159304_3	chr6	+	186	1	Intergenic	novelGene_9183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCATAAACATGTCACAAAA	NA	False	NA	NA	False	NA	NA	NA	9917457	9917643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_9917500_9917600
Isoform_159305_34	chr6	+	176	1	Intergenic	novelGene_9389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGGCGGGTC	NA	False	NA	NA	False	NA	NA	NA	59338441	59338617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_59338400_59338600
Isoform_159308_3	chr6	-	175	1	Intergenic	novelGene_9390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAATCTGTAAC	NA	False	NA	NA	False	NA	NA	NA	60268652	60268477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_60268500_60268700
Isoform_159309_15	chr6	-	218	1	Intergenic	novelGene_9391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACTTATTGTATACTA	NA	False	NA	NA	False	NA	NA	NA	60284709	60284491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_60284500_60284700
Isoform_159311_3	chr6	-	1668	1	FSM	ENSMUSG00000107755.2	ENSMUST00000204513.2	1093	1	-116	-459	-116	459	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAATTATGGTAATTCC	NA	False	NA	NA	False	AATAAA	-26	NA	60748159	60746491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_60746500_60748200
Isoform_159312_4	chr6	+	180	1	Intergenic	novelGene_9392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGACATTATAATATT	5096	False	NA	NA	False	NA	NA	NA	60949576	60949756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_60949600_60949800
Isoform_159314_10	chr6	+	208	1	Intergenic	novelGene_9393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTAGTATTATTAAATAT	NA	False	NA	NA	False	NA	NA	NA	64524973	64525181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_64525000_64525200
Isoform_159316_236	chr6	+	217	1	Intergenic	novelGene_9394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAAGTTTTTTT	NA	False	NA	65	True	NA	NA	NA	64977844	64978061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_64977800_64978100
Isoform_159317_66	chr8	+	158	1	Intergenic	novelGene_10816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	94804238	94804396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_94804200_94804400
Isoform_159318_32	chr6	+	253	1	Intergenic	novelGene_9395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAAGTCATCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	64981873	64982126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_64981900_64982100
Isoform_159322_144	chr6	+	176	1	Intergenic	novelGene_9184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAATTTATTATT	NA	False	NA	NA	False	NA	NA	NA	11286353	11286529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_11286400_11286500
Isoform_159325_3	chr6	+	1145	1	FSM	ENSMUSG00000029913.15	ENSMUST00000205168.2	4168	1	-96	3119	10	-3119	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	65755981	65757126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_65756000_65757100
Isoform_159326_8	chr6	-	171	1	Intergenic	novelGene_9396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	66045287	66045116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_66045100_66045300
Isoform_159327_10	chr6	-	194	1	Intergenic	novelGene_9397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGAGTGGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	66480381	66480187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_66480200_66480400
Isoform_159332_19	chr6	-	174	1	FSM	ENSMUSG00000107176.2	ENSMUST00000202370.2	423	1	308	-59	308	59	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTACAGAACTCCAAATAG	NA	False	NA	-1	True	ATTAAA	-26	NA	66852419	66852245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_66852200_66852400
Isoform_159335_11	chr6	-	384	1	FSM	ENSMUSG00000107176.2	ENSMUST00000202370.2	423	1	88	-49	88	49	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGCCTACAGAA	NA	False	NA	-11	True	ATTAAA	-16	NA	66852639	66852255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_66852300_66852600
Isoform_159338_5	chr6	+	1955	1	NIC	ENSMUSG00000036402.14	novel	4248	5	NA	NA	9	-119207	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	66873389	66875344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_66873400_66875300
Isoform_159339_44	chr6	+	157	1	Intergenic	novelGene_9398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	4844	False	NA	NA	False	NA	NA	NA	66940713	66940870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_66940700_66940900
Isoform_159345_12	chr6	+	184	1	Intergenic	novelGene_9401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGATGCTCAATTTGA	6556	False	NA	NA	False	NA	NA	NA	67152813	67152997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_67152800_67153000
Isoform_159346_13	chr6	+	460	1	FSM	ENSMUSG00000047905.11	ENSMUST00000120174.2	465	1	100	-95	100	95	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	22	True	ATTAAA	-21	NA	67182702	67183162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_67182700_67183200
Isoform_159351_32	chr6	+	176	1	Intergenic	novelGene_9402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAGAAAAGGAACTGA	NA	False	NA	NA	False	NA	NA	NA	67183908	67184084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_67183900_67184100
Isoform_159354_11	chr6	+	175	1	Intergenic	novelGene_9403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	67199006	67199181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_67199000_67199200
Isoform_159355_102	chr6	-	196	1	Intergenic	novelGene_9404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	67204751	67204555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_67204600_67204800
Isoform_159356_23	chr6	+	176	1	Intergenic	novelGene_9405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAACAAAACAACC	NA	False	NA	NA	False	NA	NA	NA	67217853	67218029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_67217900_67218000
Isoform_159358_16	chr6	-	176	1	Intergenic	novelGene_9406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATAAG	7784	False	NA	NA	False	NA	NA	NA	67230123	67229947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_67229900_67230100
Isoform_159359_5	chr6	-	246	1	Intergenic	novelGene_9407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAGAAAAAAAGGGAAAAA	NA	False	NA	NA	False	GATAAA	-13	NA	67238085	67237839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_67237800_67238100
Isoform_159363_29	chr6	-	558	1	Intergenic	novelGene_9408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67255759	67255201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_67255200_67255800
Isoform_159369_5	chr6	+	199	1	Intergenic	novelGene_9409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTAT	NA	False	NA	NA	False	NA	NA	NA	67335069	67335268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_67335100_67335300
Isoform_159370_7	chr6	-	173	1	Intergenic	novelGene_9410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	67900904	67900731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_67900700_67900900
Isoform_159375_4	chr6	-	173	1	Intergenic	novelGene_9411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATGAGAAAATGCG	NA	False	NA	NA	False	NA	NA	NA	70814943	70814770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_70814800_70814900
Isoform_159376_4	chr6	-	178	1	Intergenic	novelGene_9412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTTTTTAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	70828851	70828673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_70828700_70828900
Isoform_159377_17	chr6	+	170	1	Intergenic	novelGene_9413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATATTTAAAAGAA	5125	False	NA	NA	False	NA	NA	NA	70854588	70854758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_70854600_70854800
Isoform_159378_10	chr6	-	1012	1	Intergenic	novelGene_9414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	70876169	70875157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_70875200_70876200
Isoform_159379_46	chr6	+	178	1	Intergenic	novelGene_9415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGGACAAACAA	1860	False	NA	NA	False	NA	NA	NA	70967789	70967967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_70967800_70968000
Isoform_159380_8	chr6	-	171	1	Intergenic	novelGene_9416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAATAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	70982817	70982646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_70982600_70982800
Isoform_159383_1310	chr6	+	425	1	FSM	ENSMUSG00000068396.10	ENSMUST00000121998.2	354	1	-33	-38	-33	38	mono-exon	FALSE	NA	NA	NA	NA	NA	1310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	71101560	71101985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71101600_71102000
Isoform_159391_3	chr6	-	654	1	NIC	ENSMUSG00000054474.16	novel	2077	9	NA	NA	-29	-11957	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-42	NA	71121360	71120706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_71120700_71121400
Isoform_159393_56	chr6	+	3192	1	FSM	ENSMUSG00000098623.3	ENSMUST00000184382.3	131	1	28	-3089	28	3089	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71248682	71251874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_71248700_71251900
Isoform_159413_13	chr6	+	821	1	Intergenic	novelGene_9417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAGAAACACATTCCA	2462	False	NA	NA	False	NA	NA	NA	71379771	71380592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_71379800_71380600
Isoform_159415_40	chr6	+	178	1	Intergenic	novelGene_9418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	71387774	71387952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_71387800_71388000
Isoform_159419_35	chr6	-	172	1	Intergenic	novelGene_9420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATATTCAAAACTA	NA	False	NA	NA	False	NA	NA	NA	71582059	71581887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_71581900_71582100
Isoform_159421_4	chr6	+	305	1	Intergenic	novelGene_9421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAACAACACAATAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	71582311	71582616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_71582300_71582600
Isoform_159422_3	chr6	-	159	1	Intergenic	novelGene_9422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAACAAAGA	NA	False	NA	NA	False	NA	NA	NA	71711503	71711344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_71711300_71711500
Isoform_159425_11	chr6	-	2271	1	Antisense	novelGene_ENSMUSG00000052337.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71833725	71831454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_71831500_71833700
Isoform_159426_10	chr6	-	173	1	Antisense	novelGene_ENSMUSG00000052337.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAAGGACCTCT	NA	False	NA	NA	False	NA	NA	NA	71842679	71842506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_71842500_71842700
Isoform_159436_3	chr6	+	181	1	Intergenic	novelGene_9423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACAC	8909	False	NA	NA	False	NA	NA	NA	72171730	72171911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_72171700_72171900
Isoform_159438_4	chr6	-	2756	1	Intergenic	novelGene_9186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	12125194	12122438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_12122400_12125200
Isoform_159441_3	chr6	+	5827	1	FSM	ENSMUSG00000058706.6	ENSMUST00000205578.2	3900	1	4	-1931	4	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTGCCAAAAGTTGT	8313	False	NA	14	True	AATAAA	-14	NA	72324303	72330130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72324300_72330100
Isoform_159460_5	chr6	+	1567	1	FSM	ENSMUSG00000108591.2	ENSMUST00000205370.2	1560	1	-6	-1	-6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGGAGTCTGGAGCTA	1657	False	NA	NA	False	AATAAA	-15	NA	72416027	72417594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_72416000_72417600
Isoform_159461_5	chr6	-	175	1	Intergenic	novelGene_9424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAGAAAA	8502	False	NA	NA	False	NA	NA	NA	72431054	72430879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_72430900_72431100
Isoform_159462_4	chr6	-	206	1	Intergenic	novelGene_9425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAATGAGAATACAGCTC	NA	False	NA	NA	False	NA	NA	NA	72448931	72448725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_72448700_72448900
Isoform_159470_54	chr15	+	180	1	Intergenic	novelGene_3919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATGAATATAAGTA	NA	False	NA	NA	False	NA	NA	NA	61600799	61600979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_61600800_61601000
Isoform_159474_9	chr6	+	1878	2	Antisense	novelGene_ENSMUSG00000055799.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	72710896	72712818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_72711156_72711199
Isoform_159475_59	chr6	-	161	1	Intergenic	novelGene_9426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTTTTAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	72711801	72711640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_72711600_72711800
Isoform_159476_4	chr6	+	174	1	Intergenic	novelGene_9427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTTCATATTTGTAT	NA	False	NA	NA	False	NA	NA	NA	72733675	72733849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_72733700_72733800
Isoform_159477_3	chr6	+	177	1	Intergenic	novelGene_9428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATACA	NA	False	NA	NA	False	NA	NA	NA	72763057	72763234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_72763100_72763200
Isoform_159480_10	chr6	-	220	1	Intergenic	novelGene_9430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTCTTTGTTTG	7157	False	NA	NA	False	ATTAAA	-6	NA	72782094	72781874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_72781900_72782100
Isoform_159482_48	chr6	+	221	1	Intergenic	novelGene_9431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	72791066	72791287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_72791100_72791300
Isoform_159483_10	chr6	+	194	1	Intergenic	novelGene_9432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGCCTCATTATATAG	NA	False	NA	NA	False	NA	NA	NA	72804165	72804359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_72804200_72804400
Isoform_159485_11	chr6	+	176	1	Intergenic	novelGene_9433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	72822778	72822954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_72822800_72823000
Isoform_159489_9	chr6	+	2252	1	Intergenic	novelGene_9434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72877070	72879322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_72877100_72879300
Isoform_159490_42	chr6	-	177	1	Intergenic	novelGene_9435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAG	2029	False	NA	NA	False	NA	NA	NA	72883398	72883221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_72883200_72883400
Isoform_159491_83	chr6	-	219	1	Intergenic	novelGene_9436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATAACCTCATGTTCTA	NA	False	NA	-1	True	AAAACA	-24	NA	72888011	72887792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_72887800_72888000
Isoform_159492_31	chr6	-	192	1	Intergenic	novelGene_9437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGAATGAAGT	5998	False	NA	NA	False	NA	NA	NA	72894175	72893983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_72894000_72894200
Isoform_159493_7	chr6	-	180	1	Intergenic	novelGene_9438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAATAAATAAATAAAC	NA	False	NA	NA	False	NA	NA	NA	72912571	72912391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_72912400_72912600
Isoform_159494_4	chr14	-	176	1	Intergenic	novelGene_3425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGGGG	NA	False	NA	NA	False	NA	NA	NA	26929437	26929261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_26929300_26929400
Isoform_159502_72	chr17	+	177	1	Intergenic	novelGene_4954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	36182686	36182863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_36182700_36182900
Isoform_159503_4	chr6	+	178	1	Intergenic	novelGene_9440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATACCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	75007911	75008089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_75007900_75008100
Isoform_159507_14	chr6	+	177	1	Intergenic	novelGene_9441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	77352612	77352789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_77352600_77352800
Isoform_159511_13	chr6	+	171	1	Intergenic	novelGene_9442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTGAAAACTGAGCCT	NA	False	NA	NA	False	NA	NA	NA	81202824	81202995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_81202800_81203000
Isoform_159512_3	chr6	+	191	1	Intergenic	novelGene_9443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACCAAGAGTAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	81414752	81414943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_81414800_81414900
Isoform_159514_5	chr6	+	659	1	Genic_Genomic	ENSMUSG00000035125.11	novel	NA	NA	NA	NA	-19	-6859	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTAGATTAAAAATAAT	NA	False	NA	NA	False	TTTAAA	-24	NA	81900630	81901289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_+_81900600_81901300
Isoform_159516_6	chr6	-	1431	1	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	-7	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGGGAAAAAAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	13608033	13606602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_13606600_13608000
Isoform_159517_4	chr6	+	2274	1	Intergenic	novelGene_9444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTACCTTAGTTATGGT	NA	False	NA	NA	False	NA	NA	NA	82589148	82591422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_82589100_82591400
Isoform_159519_10	chr6	+	3448	1	Intergenic	novelGene_9445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82695284	82698732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_82695300_82698700
Isoform_159539_3	chr6	+	625	1	Antisense	novelGene_ENSMUSG00000000628.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACATAAATTAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-6	NA	82703002	82703627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_82703000_82703600
Isoform_159542_7	chr6	+	177	1	Intergenic	novelGene_9446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGTGTTAGTCTGG	NA	False	NA	NA	False	NA	NA	NA	82802651	82802828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_82802700_82802800
Isoform_159545_34	chr6	+	174	1	Intergenic	novelGene_9447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	5291	False	NA	NA	False	NA	NA	NA	82965834	82966008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_82965800_82966000
Isoform_159548_2704	chr6	+	175	1	ISM	ENSMUSG00000009145.7	ENSMUST00000077502.5	3257	12	9011	289	8758	-289	mono-exon	FALSE	NA	NA	NA	NA	NA	2704	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	4556	False	NA	25	True	NA	NA	NA	83043835	83044010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_83043800_83044000
Isoform_15955_455	chr11	-	4148	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	68	-1	0	-1	multi-exon	FALSE	canonical	3	268	junction_18	36.1553409289133	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGGCCTGGTTCTTT	NA	False	NA	-1	True	AATAAA	-14	NA	97171396	97096668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
Isoform_159550_3	chr6	-	3196	1	Genic_Genomic	ENSMUSG00000068327.6	novel	NA	NA	NA	NA	-26	1268	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	7218	False	NA	NA	False	NA	NA	NA	83047232	83044036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_83044000_83047200
Isoform_159551_3	chr6	-	2778	1	Genic_Genomic	ENSMUSG00000068327.6	novel	NA	NA	NA	NA	-807	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTCCAGTTGTCT	6369	False	NA	-5	True	AAAACA	-21	NA	83048081	83045303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_83045300_83048100
Isoform_159552_3	chr6	+	2487	1	NIC	ENSMUSG00000069678.11	novel	918	9	NA	NA	15	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	121	False	NA	16	True	AATAAA	-8	NA	83055341	83057828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83055300_83057800
Isoform_159553_47	chr6	+	177	1	Intergenic	novelGene_9448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGATTTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	83074151	83074328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_83074200_83074300
Isoform_159554_3	chr6	-	2497	1	Genic_Genomic	ENSMUSG00000087578.2	novel	NA	NA	NA	NA	-1	49	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	83086036	83083539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_83083500_83086000
Isoform_159558_3	chr6	-	2286	1	Antisense	novelGene_ENSMUSG00000030030.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTCACCCTTTGTACT	3806	False	NA	NA	False	NA	NA	NA	83139455	83137169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_83137200_83139500
Isoform_159559_116	chr6	-	171	1	Intergenic	novelGene_9449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAAAGAAATGT	NA	False	NA	NA	False	NA	NA	NA	83159191	83159020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_83159000_83159200
Isoform_159560_3	chr6	-	170	1	Intergenic	novelGene_9450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTAAAAACAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	83255393	83255223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_83255200_83255400
Isoform_159585_9	chr6	+	2701	1	NIC	ENSMUSG00000045160.15	novel	554	4	NA	NA	-13	-1019	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	381	False	NA	NA	False	NA	NA	NA	83326459	83329160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_83326500_83329200
Isoform_159588_3	chr6	-	3263	1	ISM	ENSMUSG00000034832.16	ENSMUST00000089622.11	10904	11	76037	3	75994	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTGTAAGCTTTTT	NA	False	NA	-1	True	AATAAA	-24	NA	83342620	83339357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_83339400_83342600
Isoform_159589_3	chr6	-	1667	1	FSM	ENSMUSG00000052419.8	ENSMUST00000185219.2	1606	1	-2	-59	-1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATTGTTTTGGTCTGC	-1	True	NA	NA	False	AATACA	-21	NA	13871466	13869799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_13869800_13871500
Isoform_159606_7	chr6	-	178	1	Intergenic	novelGene_9451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATACTTT	NA	False	NA	NA	False	NA	NA	NA	83788762	83788584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_83788600_83788800
Isoform_159607_4	chr6	-	193	1	Intergenic	novelGene_9452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATATCTAATAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	83820956	83820763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_83820800_83821000
Isoform_159609_9	chr8	+	2219	1	Intergenic	novelGene_10953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGCAGTAGATTAATGA	NA	False	NA	NA	False	NA	NA	NA	112284672	112286891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112284700_112286900
Isoform_159610_14	chr6	-	198	1	Intergenic	novelGene_9453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTATATATAAAACAAC	9832	False	NA	NA	False	AATAAA	-17	NA	83835290	83835092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_83835100_83835300
Isoform_159611_16	chr6	+	177	1	Intergenic	novelGene_9454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCTG	1085	False	NA	NA	False	NA	NA	NA	83842731	83842908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_83842700_83842900
Isoform_159612_51	chr6	-	176	1	Intergenic	novelGene_9455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATAAGTAAACC	1581	False	NA	NA	False	NA	NA	NA	83843541	83843365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_83843400_83843500
Isoform_159613_187	chr6	+	176	1	Intergenic	novelGene_9456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTTAGG	3510	False	NA	10	True	NA	NA	NA	83870930	83871106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_83870900_83871100
Isoform_159617_10	chr6	-	176	1	Intergenic	novelGene_9458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGCAATTTGTAA	3642	False	NA	NA	False	NA	NA	NA	83903523	83903347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_83903300_83903500
Isoform_159620_26	chr6	+	245	1	Intergenic	novelGene_9459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTCTAGTGAACTATAGA	NA	False	NA	NA	False	NA	NA	NA	83913545	83913790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_83913500_83913800
Isoform_159621_13	chr6	-	177	1	Intergenic	novelGene_9460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATACTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	84013193	84013016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_84013000_84013200
Isoform_159626_13	chr6	-	199	1	Intergenic	novelGene_9461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATTCATATGTGTATG	NA	False	NA	NA	False	ATTAAA	-6	NA	85044006	85043807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_85043800_85044000
Isoform_159629_3	chr6	-	3296	1	Intergenic	novelGene_9188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGATTCTGGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	14088397	14085101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_14085100_14088400
Isoform_159630_485	chr6	+	872	1	FSM	ENSMUSG00000081669.2	ENSMUST00000119728.2	528	1	-7	-337	-7	337	mono-exon	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-26	NA	85053166	85054038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85053200_85054000
Isoform_159640_4	chr13	+	175	1	Intergenic	novelGene_3237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92953523	92953698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_92953500_92953700
Isoform_159641_3	chr6	-	163	1	Intergenic	novelGene_9462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAACACACACAA	2607	False	NA	NA	False	NA	NA	NA	85372084	85371921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_85371900_85372100
Isoform_159648_7	chr6	+	176	1	Intergenic	novelGene_9463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTACTTTGTG	NA	False	NA	NA	False	NA	NA	NA	85503759	85503935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_85503800_85503900
Isoform_15965_18	chr11	-	4254	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	-38	-1	-38	-1	multi-exon	FALSE	canonical	3	268	junction_18	36.1553409289133	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGGCCTGGTTCTTT	NA	False	NA	-1	True	AATAAA	-14	NA	97171502	97096668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
Isoform_159652_13	chr19	-	174	2	Intergenic	novelGene_5715	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24318159	24286114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_24286238_24318108
Isoform_159653_4	chr6	-	173	1	Intergenic	novelGene_9464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTAAAAATTGCATC	NA	False	NA	NA	False	NA	NA	NA	85702855	85702682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_85702700_85702900
Isoform_159654_34	chr6	-	175	1	Intergenic	novelGene_9465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTGCATCCTGC	7150	False	NA	NA	False	NA	NA	NA	85755338	85755163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_85755200_85755300
Isoform_159656_133	chr6	+	1489	1	FSM	ENSMUSG00000040078.10	ENSMUST00000160012.2	480	1	-95	-914	-95	914	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	85820866	85822355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_85820900_85822400
Isoform_159667_3	chr6	-	176	1	Intergenic	novelGene_9466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATACTATAGTT	2233	False	NA	NA	False	NA	NA	NA	85913439	85913263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_85913300_85913400
Isoform_159679_12	chr6	+	176	1	Intergenic	novelGene_9467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAACATTTTAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	85948994	85949170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_85949000_85949200
Isoform_159680_7	chr6	+	176	1	Intergenic	novelGene_9468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGGAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	86294780	86294956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_86294800_86295000
Isoform_159681_18	chr6	+	188	1	Intergenic	novelGene_9469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAGAAAAGCAATG	NA	False	NA	8	True	NA	NA	NA	86304190	86304378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_86304200_86304400
Isoform_159691_69	chr6	+	186	1	Intergenic	novelGene_9470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86357359	86357545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_86357400_86357500
Isoform_159696_5	chr6	+	902	1	FSM	ENSMUSG00000071337.12	ENSMUST00000203206.2	935	1	34	-1	-13	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCGACTAGTGGTTGACA	9731	False	NA	NA	False	ATTAAA	-16	NA	86381250	86382152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86381200_86382200
Isoform_159697_6	chr6	+	176	1	Intergenic	novelGene_9471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTAAAAGATCTCCAT	NA	False	NA	NA	False	NA	NA	NA	86385369	86385545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_86385400_86385500
Isoform_159698_23	chr6	-	170	1	Intergenic	novelGene_9472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGGAGATCTTTTAAAAA	2969	False	NA	-1	True	NA	NA	NA	86385737	86385567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86385600_86385700
Isoform_159699_3	chr6	+	171	1	FSM	ENSMUSG00000071337.12	ENSMUST00000203546.2	2654	1	-103	2586	-103	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	86398859	86399030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86398900_86399000
Isoform_1597_10	chr10	-	4325	7	FSM	ENSMUSG00000015755.17	ENSMUST00000146444.8	4380	7	53	2	53	-2	multi-exon	FALSE	canonical	3	30	junction_6	9.12262145560267	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGATTTTGTGGCTTG	1341	False	NA	-8	True	ATTAAA	-15	NA	7831941	7781418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7796379_7800448_7800637_7831564
Isoform_159700_4	chr6	+	1072	1	NIC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	32	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTCGGGTCTCAAATT	1500	False	NA	NA	False	ATTAAA	-5	NA	86415402	86416474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86415400_86416500
Isoform_159701_13	chr6	+	822	1	Genic_Genomic	ENSMUSG00000046679.17	novel	NA	NA	NA	NA	-18	7	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGGTCTCAAATTACT	1753	False	NA	NA	False	ATTAAA	-8	NA	86415655	86416477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_+_86415700_86416500
Isoform_159705_4	chr6	-	163	1	Intergenic	novelGene_9473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATAAATCTTAAAAAAAA	9831	False	NA	NA	False	NA	NA	NA	86428796	86428633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86428600_86428800
Isoform_159706_6	chr6	-	154	1	Intergenic	novelGene_9474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGGTAAACAAA	8173	False	NA	NA	False	NA	NA	NA	86464032	86463878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86463900_86464000
Isoform_159707_4	chr6	-	193	1	Intergenic	novelGene_9475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATGAAGAACTCAG	6447	False	NA	NA	False	NA	NA	NA	86465758	86465565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86465600_86465800
Isoform_159710_4	chr6	+	191	1	Antisense	novelGene_ENSMUSG00000107689.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAACAA	3413	False	NA	NA	False	NA	NA	NA	86490922	86491113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_86490900_86491100
Isoform_159712_3773	chr6	-	1674	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	149	7	149	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3773	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCTTCGTATTTGAA	NA	False	NA	29	True	ATTAAA	-15	NA	86503154	86501480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86501500_86503200
Isoform_159713_807	chr6	-	1726	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	97	7	97	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	807	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCTTCGTATTTGAA	NA	False	NA	29	True	ATTAAA	-15	NA	86503206	86501480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86501500_86503200
Isoform_159715_50	chr6	-	2061	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	-238	7	-238	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCTTCGTATTTGAA	NA	False	NA	29	True	ATTAAA	-15	NA	86503541	86501480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86501500_86503500
Isoform_159733_4	chr6	+	1659	1	NIC	ENSMUSG00000097048.8	novel	361	4	NA	NA	-158	-22732	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	86503633	86505292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_86503600_86505300
Isoform_159735_70	chr6	-	158	1	Intergenic	novelGene_9476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATCCAAAAA	9572	False	NA	NA	False	NA	NA	NA	86506717	86506559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86506600_86506700
Isoform_159736_39	chr6	-	175	1	Intergenic	novelGene_9477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTTTAAAAATAAA	5193	False	NA	NA	False	NA	NA	NA	86511096	86510921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86510900_86511100
Isoform_159737_17	chr6	-	178	1	Intergenic	novelGene_9478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATCTA	4229	False	NA	NA	False	NA	NA	NA	86512060	86511882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86511900_86512100
Isoform_159738_5	chr6	-	175	1	Intergenic	novelGene_9479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGCTCACTTG	2726	False	NA	NA	False	NA	NA	NA	86513563	86513388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86513400_86513600
Isoform_159744_12	chr6	-	197	1	Intergenic	novelGene_9480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAATTAAAAAAAAAA	4534	False	NA	NA	False	NA	NA	NA	86581433	86581236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86581200_86581400
Isoform_159745_3	chr6	+	1517	1	FSM	ENSMUSG00000033508.9	ENSMUST00000043400.9	1547	1	23	7	23	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTCATGTGCTCG	NA	False	NA	NA	False	AATAAA	-15	NA	86605168	86606685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_86605200_86606700
Isoform_159746_64	chr6	-	176	1	FSM	ENSMUSG00000001157.14	ENSMUST00000203741.2	2750	1	1747	827	1747	-743	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGCTTCATTGCA	NA	False	NA	NA	False	NA	NA	NA	86692128	86691952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86692000_86692100
Isoform_159749_8	chr6	+	175	1	Intergenic	novelGene_9481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	86723910	86724085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_86723900_86724100
Isoform_159750_38	chr3	-	177	1	Intergenic	novelGene_7174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATTCCTCT	4433	False	NA	NA	False	NA	NA	NA	94583631	94583454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_94583500_94583600
Isoform_159752_12	chr6	-	1025	1	FSM	ENSMUSG00000100164.2	ENSMUST00000185414.2	1042	1	9	8	9	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTATAGGTTATTTTT	NA	False	NA	NA	False	AATACA	-16	NA	86826413	86825388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_86825400_86826400
Isoform_159754_120	chr6	-	177	1	Intergenic	novelGene_9482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATCCA	NA	False	NA	NA	False	NA	NA	NA	86919596	86919419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_86919400_86919600
Isoform_159756_3	chr6	+	5116	1	Genic_Genomic	ENSMUSG00000057230.15	novel	NA	NA	NA	NA	3099	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTAGTTGTGTGTTTTT	NA	False	NA	6	True	ATTAAA	-16	NA	86975090	86980206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_+_86975100_86980200
Isoform_159759_3	chr6	-	178	1	Intergenic	novelGene_9483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	87012793	87012615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_87012600_87012800
Isoform_159760_8	chr6	+	2828	1	FSM	ENSMUSG00000029992.15	ENSMUST00000204872.2	2809	1	-19	0	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9930	False	NA	NA	False	NA	NA	NA	87019812	87022640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_87019800_87022600
Isoform_159762_22	chr6	-	177	1	Intergenic	novelGene_9484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTTTTTAAATAA	NA	False	NA	NA	False	NA	NA	NA	87090444	87090267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_87090300_87090400
Isoform_159764_6	chr6	-	156	1	Intergenic	novelGene_9485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAATAATAAAAAAAAAAGT	6376	False	NA	NA	False	NA	NA	NA	87484782	87484626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_87484600_87484800
Isoform_159767_17	chr6	-	166	1	FSM	ENSMUSG00000068262.5	ENSMUST00000089501.5	1209	1	1149	-106	1149	106	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCAAGCAAGCAAGCT	3249	False	NA	NA	False	NA	NA	NA	87742037	87741871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87741900_87742000
Isoform_159769_28	chr6	+	175	1	Intergenic	novelGene_9487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAATAAAAAAAAAAAAAAA	1274	False	NA	NA	False	NA	NA	NA	87812248	87812423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_87812200_87812400
Isoform_159770_12	chr6	-	178	1	Intergenic	novelGene_9189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15983639	15983461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_15983500_15983600
Isoform_159790_3	chr6	-	176	1	Intergenic	novelGene_9488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATTACAAAAGA	9086	False	NA	NA	False	NA	NA	NA	87836614	87836438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_87836400_87836600
Isoform_159791_4	chr6	-	177	1	Intergenic	novelGene_9489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAG	4422	False	NA	NA	False	NA	NA	NA	87847125	87846948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_87846900_87847100
Isoform_159792_3	chr6	-	257	1	Intergenic	novelGene_9490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGACAGTGTGTCCATC	3503	False	NA	NA	False	NA	NA	NA	87848044	87847787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_87847800_87848000
Isoform_159796_267	chr6	-	1209	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	7	1	7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTCGTTGTCTTGTG	6916	False	NA	-3	True	AATAAA	-15	NA	87958612	87957403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_87957400_87958600
Isoform_15980_4	chr11	-	1730	10	ISM	ENSMUSG00000018537.17	ENSMUST00000103148.8	1438	11	-62	5	-55	-5	intron_retention	FALSE	canonical	3	57	junction_9	50.8265022732564	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCAAATATACATACT	NA	False	NA	3	True	NA	NA	NA	97590529	97580650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590031
Isoform_159800_27	chr6	-	293	1	Intergenic	novelGene_9491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGCATGGCTACCTTCT	7201	False	NA	NA	False	NA	NA	NA	87974436	87974143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_87974100_87974400
Isoform_15981_6	chr11	-	2355	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	-7	-1	-7	1	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGGTTCTTTGGGAC	NA	False	NA	-2	True	AATAAA	-18	NA	97590481	97579647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
Isoform_159811_3	chr6	+	170	1	Intergenic	novelGene_9492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTTAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	87998333	87998503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_87998300_87998500
Isoform_159814_4	chr6	+	1634	1	Antisense	novelGene_ENSMUSG00000108268.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88016232	88017866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_88016200_88017900
Isoform_159816_3	chr6	-	176	1	Intergenic	novelGene_9493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAATGTCTCCTG	6936	False	NA	NA	False	NA	NA	NA	88038293	88038117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_88038100_88038300
Isoform_159817_3	chr6	-	174	1	Intergenic	novelGene_9494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGCAAGCAGGAGCTGAA	NA	False	NA	NA	False	NA	NA	NA	88045338	88045164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_88045200_88045300
Isoform_159818_4	chr6	+	177	1	Intergenic	novelGene_9495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAAAAT	2921	False	NA	NA	False	NA	NA	NA	88051001	88051178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_88051000_88051200
Isoform_159819_13	chr6	+	212	1	Intergenic	novelGene_9496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	3316	False	NA	NA	False	NA	NA	NA	88051396	88051608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_88051400_88051600
Isoform_159822_5	chr6	-	176	1	Intergenic	novelGene_9497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAGAAAGAAGGAA	8540	False	NA	NA	False	NA	NA	NA	88066497	88066321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_88066300_88066500
Isoform_159823_6	chr6	-	272	1	Antisense	novelGene_ENSMUSG00000030062.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGATAGGCCACTGCCACG	NA	False	NA	NA	False	AAAAAG	-41	NA	88080930	88080658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_88080700_88080900
Isoform_159825_5	chr6	+	197	1	Intergenic	novelGene_9498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTATGTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	88134180	88134377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_88134200_88134400
Isoform_159826_7	chr6	+	155	1	Intergenic	novelGene_9499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAATATTT	2500	False	NA	NA	False	NA	NA	NA	88224787	88224942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_88224800_88224900
Isoform_159827_179	chr6	+	179	1	Intergenic	novelGene_9500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATACTAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	88327547	88327726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_88327500_88327700
Isoform_159828_3	chr6	-	194	1	Intergenic	novelGene_9190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACCGGAGCAGGCAAC	NA	False	NA	NA	False	NA	NA	NA	17315532	17315338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_17315300_17315500
Isoform_15983_34	chr11	-	1371	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	7	969	0	0	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCAGATTAATTTAAAT	NA	False	NA	36	True	AATATA	-20	NA	97590467	97580617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
Isoform_159830_6	chr6	+	175	1	Intergenic	novelGene_9501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATAAACAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	88415246	88415421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_88415200_88415400
Isoform_159849_5	chr6	-	4054	1	Antisense	novelGene_ENSMUSG00000055403.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	89077770	89073716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_89073700_89077800
Isoform_15986_11	chr11	-	1389	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	-64	1022	-64	-25	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATATATGTACATAGG	NA	False	NA	-17	True	NA	NA	NA	97590538	97580670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
Isoform_159866_86	chr2	-	182	1	Intergenic	novelGene_6716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157662602	157662420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_157662400_157662600
Isoform_159871_6	chr6	-	167	1	Intergenic	novelGene_9503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAATCTTAAAAAAAAAA	1259	False	NA	NA	False	NA	NA	NA	90763044	90762877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_90762900_90763000
Isoform_159873_8	chr10	-	199	1	Intergenic	novelGene_1280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGTAGGTCTCATATA	9406	False	NA	NA	False	NA	NA	NA	128553483	128553284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_128553300_128553500
Isoform_159878_9	chr6	+	182	1	Intergenic	novelGene_9191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAATGCTTATTGTCT	NA	False	NA	NA	False	NA	NA	NA	17707356	17707538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_17707400_17707500
Isoform_15988_8	chr11	-	1433	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	-57	971	-57	-2	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAACCAGATTAATTTAA	NA	False	NA	34	True	AATATA	-18	NA	97590531	97580619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
Isoform_159881_9	chr6	-	171	1	Intergenic	novelGene_9504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAGAGAAAGAAAACAA	NA	False	NA	1	True	NA	NA	NA	91448522	91448351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_91448400_91448500
Isoform_159883_22	chr6	-	1838	1	FSM	ENSMUSG00000034203.9	ENSMUST00000205802.2	1854	1	20	-4	20	4	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91450411	91448573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_91448600_91450400
Isoform_159885_3	chr6	-	2390	1	Antisense	novelGene_ENSMUSG00000106822.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATTGTGGTAAG	NA	False	NA	NA	False	NA	NA	NA	17722286	17719896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_17719900_17722300
Isoform_159887_5	chr6	+	176	1	Intergenic	novelGene_9505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91641150	91641326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_91641200_91641300
Isoform_15990_60	chr11	-	3543	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	0	1510	0	-1510	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGACAAGTTTTCTTTC	NA	False	NA	-6	True	TTTAAA	-16	NA	97635530	97607492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
Isoform_15992_10	chr11	-	5043	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	10	0	10	0	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATGTGAGTCCTTTG	NA	False	NA	-5	True	AATAAA	-22	NA	97635520	97605982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
Isoform_15993_129	chr11	-	3105	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	1	-1	1	1	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTAGAGCGATCTACC	7436	False	NA	-20	True	AATAAA	-20	NA	97657381	97636439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
Isoform_159936_4	chr6	-	635	1	Antisense	novelGene_ENSMUSG00000029534.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	17840569	17839934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_17839900_17840600
Isoform_159939_136	chr11	-	176	1	Intergenic	novelGene_1914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAAGTTT	7227	False	NA	NA	False	NA	NA	NA	84833144	84832968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_84833000_84833100
Isoform_15994_40	chr11	-	3241	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	0	-136	0	2	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTGGAGCAAGAATGAA	7435	False	NA	1	True	AATAAA	-22	NA	97657382	97636304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
Isoform_159940_9	chr6	-	923	1	ISM	ENSMUSG00000045095.17	ENSMUST00000089317.12	7209	24	604365	2580	113582	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTTTTGAAAATTATT	NA	False	NA	0	True	ATTAAA	-20	NA	93655938	93655015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_93655000_93655900
Isoform_159942_38	chr6	+	163	1	Intergenic	novelGene_9508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATCATA	NA	False	NA	NA	False	NA	NA	NA	93980828	93980991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_93980800_93981000
Isoform_159943_7	chr6	+	5949	1	Intergenic	novelGene_9509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	170	False	NA	NA	False	NA	NA	NA	94130823	94136772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_94130800_94136800
Isoform_159944_7	chr6	+	166	1	Intergenic	novelGene_9510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	94165587	94165753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_94165600_94165800
Isoform_159945_8	chr6	+	2108	1	Intergenic	novelGene_9511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAG	6430	False	NA	NA	False	NA	NA	NA	94228386	94230494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_94228400_94230500
Isoform_159946_4	chr6	-	182	1	Intergenic	novelGene_9512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAGCATACAAC	NA	False	NA	NA	False	NA	NA	NA	94269964	94269782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_94269800_94270000
Isoform_159947_52	chr6	+	163	1	Intergenic	novelGene_9513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACAGCAG	NA	False	NA	NA	False	NA	NA	NA	94270758	94270921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_94270800_94270900
Isoform_159948_11	chr6	-	172	1	Intergenic	novelGene_9192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	18569795	18569623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_18569600_18569800
Isoform_15995_41	chr11	-	3147	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	-23	-19	-23	19	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGCCTGGTACTGAGT	7412	False	NA	-2	True	AATAAA	-38	NA	97657405	97636421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
Isoform_159950_15	chr6	-	178	1	Intergenic	novelGene_9514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATAGCCGGGTGT	NA	False	NA	NA	False	NA	NA	NA	94743744	94743566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_94743600_94743700
Isoform_159951_5	chr6	+	177	1	Intergenic	novelGene_9515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGGTCAATAGCGCC	NA	False	NA	NA	False	NA	NA	NA	95000512	95000689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_95000500_95000700
Isoform_159958_5	chr6	+	1900	1	Intergenic	novelGene_9516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	97099370	97101270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_97099400_97101300
Isoform_159959_12	chr6	-	176	1	Intergenic	novelGene_9193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	18967789	18967613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_18967600_18967800
Isoform_159960_5	chr6	+	5827	1	FSM	ENSMUSG00000107502.2	ENSMUST00000203184.2	3527	1	1020	-3320	1020	3320	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-32	NA	97126174	97132001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_97126200_97132000
Isoform_159961_13	chr11	+	176	1	Intergenic	novelGene_1736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTGGAGA	NA	False	NA	NA	False	NA	NA	NA	75078901	75079077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75078900_75079100
Isoform_159963_6	chr6	+	173	1	Intergenic	novelGene_9518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGATGATAAGAGCTA	5929	False	NA	NA	False	NA	NA	NA	97391129	97391302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_97391100_97391300
Isoform_159964_3	chr6	+	173	1	Intergenic	novelGene_9519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAATAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	97598308	97598481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_97598300_97598500
Isoform_159965_4	chr6	-	178	1	Intergenic	novelGene_9520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATTCAGTAA	NA	False	NA	NA	False	NA	NA	NA	97934459	97934281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_97934300_97934500
Isoform_159974_26	chr6	-	170	1	Intergenic	novelGene_9521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTTTAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	99271068	99270898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_99270900_99271100
Isoform_159975_19	chr6	+	173	1	Intergenic	novelGene_9522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGAAAGAACTAAC	NA	False	NA	NA	False	NA	NA	NA	99283523	99283696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_99283500_99283700
Isoform_159978_23	chr6	+	2787	1	FSM	ENSMUSG00000072875.3	ENSMUST00000101122.3	2388	1	-400	1	-400	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTGTTTTGTTTTTGA	3367	False	NA	9	True	AATATA	-19	NA	99669239	99672026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_99669200_99672000
Isoform_15999_14	chr11	-	3257	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	-23	-129	-23	-5	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGATTTCTTGGAGCAA	7412	False	NA	-6	True	AATAAA	-15	NA	97657405	97636311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
Isoform_159991_26	chr6	-	623	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	93	-197	93	197	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATTTCAGAAT	NA	False	NA	-9	True	AATAAA	-16	NA	99855202	99854579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_99854600_99855200
Isoform_159995_9	chr6	+	174	1	Intergenic	novelGene_9523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100109711	100109885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_100109700_100109900
Isoform_159996_50	chr6	+	166	1	Intergenic	novelGene_9524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTATTTTTATT	NA	False	NA	NA	False	NA	NA	NA	100145916	100146082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_100145900_100146100
Isoform_160004_10	chr6	-	2437	1	ISM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	56484	0	2130	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100207962	100205525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_100205500_100208000
Isoform_160015_23	chr6	+	5794	1	Intergenic	novelGene_9525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100215314	100221108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_100215300_100221100
Isoform_160017_4	chr6	+	8121	1	Intergenic	novelGene_9526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100255167	100263288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_100255200_100263300
Isoform_160032_6	chr6	-	329	1	FSM	ENSMUSG00000107806.2	ENSMUST00000205008.2	240	1	-3	-86	-3	86	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACAATAAAGGCAGATGT	NA	False	NA	NA	False	NA	NA	NA	101123443	101123114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_101123100_101123400
Isoform_160033_3	chr6	+	5920	1	Intergenic	novelGene_9527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATCGCCCTCCAGGGAG	NA	False	NA	NA	False	NA	NA	NA	101268291	101274211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_101268300_101274200
Isoform_160034_14	chr6	-	179	1	Intergenic	novelGene_9528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACAGCTGATTA	NA	False	NA	NA	False	NA	NA	NA	102682470	102682291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_102682300_102682500
Isoform_160035_9	chr6	+	173	1	Intergenic	novelGene_9529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGGCTTCTTAGATT	NA	False	NA	NA	False	NA	NA	NA	103721307	103721480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_103721300_103721500
Isoform_160042_155	chr6	-	361	1	FSM	ENSMUSG00000091845.2	ENSMUST00000025040.6	390	1	17	12	17	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTTATTTG	NA	False	NA	-19	True	AATAAA	-15	NA	108117453	108117092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_108117100_108117500
Isoform_160044_18	chr6	-	180	1	Intergenic	novelGene_9530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGGA	NA	False	NA	NA	False	NA	NA	NA	108148449	108148269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_108148300_108148400
Isoform_160045_19	chr6	+	176	1	Intergenic	novelGene_9531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	108537833	108538009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_108537800_108538000
Isoform_160052_4	chr6	-	182	1	Intergenic	novelGene_9532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACTTATTTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	108747963	108747781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_108747800_108748000
Isoform_160062_461	chr6	-	193	1	Intergenic	novelGene_9533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAACTAATGTACATTG	NA	False	NA	NA	False	NA	NA	NA	111042265	111042072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_111042100_111042300
Isoform_160063_6	chr6	+	2700	1	FSM	ENSMUSG00000083443.2	ENSMUST00000120088.2	1566	1	-31	-1103	-31	1103	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTCT	NA	False	NA	NA	False	AATAAA	-25	NA	112540571	112543271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_112540600_112543300
Isoform_160064_4	chr1	-	3449	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	35.6111477792256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078552	183057915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076018_183076340_183076429_183078446
Isoform_160067_3	chr6	-	3783	1	NIC	ENSMUSG00000086429.10	novel	551	3	NA	NA	2987	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTCAAACTGTGGAATG	NA	False	NA	-10	True	NA	NA	NA	113051151	113047368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_113047400_113051200
Isoform_160068_3	chr6	+	2349	1	Antisense	novelGene_ENSMUSG00000029672.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-45	NA	22341110	22343459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_22341100_22343500
Isoform_160069_3	chr6	-	177	1	Intergenic	novelGene_9534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATTCCTATTAGTAA	9666	False	NA	NA	False	NA	NA	NA	113066656	113066479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_113066500_113066700
Isoform_160076_3	chr6	+	185	1	Intergenic	novelGene_9535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAGTTGACTGGCAAGA	NA	False	NA	NA	False	NA	NA	NA	113190143	113190328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_113190100_113190300
Isoform_160077_3	chr6	+	210	1	Intergenic	novelGene_9536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAACTAA	NA	False	NA	NA	False	NA	NA	NA	113198490	113198700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_113198500_113198700
Isoform_160078_26	chr6	+	180	1	Intergenic	novelGene_9537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTTTTCCCCA	5798	False	NA	NA	False	NA	NA	NA	113218633	113218813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_113218600_113218800
Isoform_160079_44	chr6	+	174	1	Intergenic	novelGene_9538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTTTGTGAA	9305	False	NA	NA	False	NA	NA	NA	113222140	113222314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_113222100_113222300
Isoform_160081_18	chr6	+	177	1	Intergenic	novelGene_9194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAGTTAATGTATAG	NA	False	NA	NA	False	NA	NA	NA	22356973	22357150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_22357000_22357200
Isoform_160082_32	chr6	-	178	1	Intergenic	novelGene_9539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAATTAAAACAAGACTAC	NA	False	NA	NA	False	NA	NA	NA	113309970	113309792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_113309800_113310000
Isoform_160084_18	chr6	-	171	1	Intergenic	novelGene_9195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTAGCAATGTG	3683	False	NA	NA	False	NA	NA	NA	22388386	22388215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_22388200_22388400
Isoform_160093_41	chr6	-	191	1	Intergenic	novelGene_9541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTATTTAAAAAAAAA	7501	False	NA	NA	False	NA	NA	NA	113524120	113523929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_113523900_113524100
Isoform_160094_74	chr6	+	174	1	Intergenic	novelGene_9542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGGAGGCAC	NA	False	NA	NA	False	NA	NA	NA	113567715	113567889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_113567700_113567900
Isoform_160096_27	chr6	+	185	1	Antisense	novelGene_ENSMUSG00000107846.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGAGAGAAAAG	3066	False	NA	NA	False	NA	NA	NA	113653668	113653853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_113653700_113653900
Isoform_160098_98	chr6	+	179	1	Intergenic	novelGene_9543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	114802248	114802427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_114802200_114802400
Isoform_160100_3	chr6	-	2650	1	Genic_Genomic	ENSMUSG00000030315.16	novel	NA	NA	NA	NA	-2	-9696	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAGGAAAG	7863	False	NA	NA	False	NA	NA	NA	114852070	114849420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_114849400_114852100
Isoform_160112_5	chr6	+	168	1	Intergenic	novelGene_9546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGATACCAACT	NA	False	NA	NA	False	NA	NA	NA	115658787	115658955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_115658800_115659000
Isoform_160113_19	chr6	-	1368	1	Intergenic	novelGene_9548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	115662425	115661057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_115661100_115662400
Isoform_160115_4	chr6	-	366	1	Intergenic	novelGene_9549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAATCAGTAACT	3957	False	NA	NA	False	NA	NA	NA	115681517	115681151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_115681200_115681500
Isoform_160117_12	chr6	-	177	1	Intergenic	novelGene_9550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGATATCTGATTC	NA	False	NA	NA	False	NA	NA	NA	115714850	115714673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_115714700_115714800
Isoform_160118_26	chr6	-	174	1	Intergenic	novelGene_9551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	115765116	115764942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_115764900_115765100
Isoform_160119_5	chr6	+	205	1	Intergenic	novelGene_9196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCCCACTACCTGATCA	2759	False	NA	NA	False	NA	NA	NA	23093676	23093881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_23093700_23093900
Isoform_160124_83	chr6	+	170	1	Intergenic	novelGene_9552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTGACATG	NA	False	NA	NA	False	NA	NA	NA	115977205	115977375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_115977200_115977400
Isoform_160125_37	chr6	-	180	1	Intergenic	novelGene_9553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAATGTAAAA	9470	False	NA	NA	False	NA	NA	NA	116047418	116047238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_116047200_116047400
Isoform_160126_14	chr6	+	208	1	Intergenic	novelGene_9554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTTAATCAAATAGTCC	7746	False	NA	NA	False	NA	NA	NA	116145183	116145391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_116145200_116145400
Isoform_160127_841	chr6	+	882	1	FSM	ENSMUSG00000101878.2	ENSMUST00000173192.2	387	1	-104	-391	-104	391	mono-exon	FALSE	NA	NA	NA	NA	NA	841	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	116150593	116151475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_116150600_116151500
Isoform_16013_3690	chr11	-	497	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	54	508	-1	3	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	3690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGTCTTCTTGACACC	NA	False	NA	-32	True	ATTAAA	-14	NA	97673209	97668860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
Isoform_160138_4	chr6	-	1872	1	Genic_Genomic	ENSMUSG00000108030.2	novel	NA	NA	NA	NA	-5	-6719	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTAGGGTCAGAACTAGAA	8504	False	NA	NA	False	NA	NA	NA	116184959	116183087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_116183100_116185000
Isoform_160139_3	chr6	-	2363	1	Intergenic	novelGene_9555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4063	False	NA	NA	False	NA	NA	NA	116189400	116187037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_116187000_116189400
Isoform_160140_100	chr6	-	175	1	Intergenic	novelGene_9556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCTAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	116200599	116200424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_116200400_116200600
Isoform_160152_4	chr6	+	182	1	Intergenic	novelGene_9557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCTTGCATCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	117854767	117854949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_117854800_117854900
Isoform_160154_3	chr6	+	218	1	Intergenic	novelGene_9558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAAAAAATACCTCTA	376	False	NA	NA	False	AAAAAG	-11	NA	117863462	117863680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_117863500_117863700
Isoform_16016_68	chr11	-	1006	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	54	-1	-1	1	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGAGTGCTTGAGAA	NA	False	NA	-8	True	AATAAA	-18	NA	97673209	97668351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
Isoform_160174_3	chr6	-	659	1	Intergenic	novelGene_9559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGTGTACTTACATAAA	3596	False	NA	NA	False	NA	NA	NA	117904161	117903502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_117903500_117904200
Isoform_160176_10	chr6	-	184	1	Intergenic	novelGene_9560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCGAATTTATTCCAAG	4015	False	NA	NA	False	NA	NA	NA	117903742	117903558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_117903600_117903700
Isoform_160178_8	chr6	-	180	1	Intergenic	novelGene_9561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	117954202	117954022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_117954000_117954200
Isoform_160179_3	chr6	-	223	1	Intergenic	novelGene_9562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117963605	117963382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_117963400_117963600
Isoform_160180_70	chr6	-	190	1	Intergenic	novelGene_9563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAATTGAAGGTG	NA	False	NA	NA	False	NA	NA	NA	117963817	117963627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_117963600_117963800
Isoform_160181_22	chr6	-	176	1	Intergenic	novelGene_9564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117986684	117986508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_117986500_117986700
Isoform_160187_10	chr6	-	175	1	Intergenic	novelGene_9565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACT	2519	False	NA	NA	False	NA	NA	NA	119118753	119118578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_119118600_119118800
Isoform_16019_84	chr11	-	570	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	-19	508	-19	3	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGTCTTCTTGACACC	NA	False	NA	-32	True	ATTAAA	-14	NA	97673282	97668860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
Isoform_160199_7	chr6	+	248	1	Intergenic	novelGene_9566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATGTCAATTTAAAAA	NA	False	NA	NA	False	AATAAA	-7	NA	119378083	119378331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_119378100_119378300
Isoform_160200_6	chr6	+	842	1	Antisense	novelGene_ENSMUSG00000106946.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGCAATGTGAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	24659536	24660378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_24659500_24660400
Isoform_160202_9	chr6	-	1237	1	NIC	ENSMUSG00000030168.14	novel	4184	8	NA	NA	-78	-46166	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7476	False	NA	NA	False	NA	NA	NA	119394514	119393277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_119393300_119394500
Isoform_160204_24	chr6	+	3343	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	-380	0	-380	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCCCTTGTATCTGTGA	NA	False	NA	42	True	AATAAA	-43	NA	119456248	119459591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_119456200_119459600
Isoform_160205_120	chr6	+	3092	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	-146	17	-146	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGCACAAAATCC	NA	False	NA	25	True	AATAAA	-26	NA	119456482	119459574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_119456500_119459600
Isoform_160206_8	chr6	+	3412	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	-150	-299	-150	299	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGTGGCCAGTTTCTTT	NA	False	NA	NA	False	AAGAAA	-43	NA	119456478	119459890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_119456500_119459900
Isoform_160214_3	chr6	-	192	1	Intergenic	novelGene_9567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAAACCAAACCAAACA	2588	False	NA	NA	False	NA	NA	NA	119541705	119541513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_119541500_119541700
Isoform_160215_3	chr6	-	2194	2	NNC	ENSMUSG00000030172.16	novel	8356	19	NA	NA	48039	782	intron_retention	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119551027	119548808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr6_-_119550057_119550081
Isoform_160217_3	chr6	+	152	1	Intergenic	novelGene_9197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAACCTTTTAAAA	5507	False	NA	NA	False	NA	NA	NA	24753847	24753999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_24753800_24754000
Isoform_160218_14	chr6	-	176	1	Intergenic	novelGene_9568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTGTCCAA	NA	False	NA	NA	False	NA	NA	NA	119559907	119559731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_119559700_119559900
Isoform_160219_15	chr6	-	189	1	Intergenic	novelGene_9569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATACA	NA	False	NA	NA	False	NA	NA	NA	119579443	119579254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_119579300_119579400
Isoform_160220_10	chr6	+	4111	1	Intergenic	novelGene_9570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-39	NA	119765157	119769268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_119765200_119769300
Isoform_160221_3	chr6	+	169	1	Intergenic	novelGene_9571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAATCTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119772435	119772604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_119772400_119772600
Isoform_160230_8	chr6	-	2334	1	ISM	ENSMUSG00000045962.17	ENSMUST00000159903.2	2934	2	957	2	957	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGGTTGTTCTTTCT	NA	False	NA	-3	True	AATAAA	-19	NA	119903265	119900931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_119900900_119903300
Isoform_160235_7	chr6	+	4609	1	Intergenic	novelGene_9572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119984427	119989036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_119984400_119989000
Isoform_160236_8	chr6	+	178	1	Intergenic	novelGene_9573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAGACACTG	NA	False	NA	NA	False	NA	NA	NA	120005422	120005600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120005400_120005600
Isoform_160238_4	chr6	-	168	1	Intergenic	novelGene_9574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAGAGACTGGAGTT	NA	False	NA	NA	False	NA	NA	NA	120039613	120039445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120039400_120039600
Isoform_160239_5	chr6	+	153	1	Intergenic	novelGene_9575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGAG	5691	False	NA	NA	False	NA	NA	NA	120045604	120045757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120045600_120045800
Isoform_160240_14	chr6	+	191	1	Intergenic	novelGene_9576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTTTTTTTTTAGCT	NA	False	NA	NA	False	AATAAA	-9	NA	120055445	120055636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120055400_120055600
Isoform_160241_542	chr6	+	222	1	Intergenic	novelGene_9577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTATTAAAATAGATTAAA	NA	False	NA	NA	False	NA	NA	NA	120064237	120064459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120064200_120064500
Isoform_160242_3	chr6	-	314	1	Intergenic	novelGene_9578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAGTTAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	120066245	120065931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120065900_120066200
Isoform_160243_12	chr6	+	187	1	Intergenic	novelGene_9579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAGCAT	9179	False	NA	NA	False	NA	NA	NA	120102554	120102741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120102600_120102700
Isoform_160246_39	chr6	+	375	1	Intergenic	novelGene_9580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCACAAGAGAAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	120204671	120205046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120204700_120205000
Isoform_160247_29	chr5	-	208	1	Intergenic	novelGene_8758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTAGAGCTGGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	110624142	110623934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_110623900_110624100
Isoform_160249_119	chr6	+	183	1	Intergenic	novelGene_9581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAGAAAAACCAGAGA	NA	False	NA	NA	False	NA	NA	NA	120269259	120269442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120269300_120269400
Isoform_160250_8	chr6	+	195	1	Intergenic	novelGene_9582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTTGTTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	120276211	120276406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120276200_120276400
Isoform_160253_9	chr6	+	199	1	Intergenic	novelGene_9583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	120328204	120328403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120328200_120328400
Isoform_160254_27	chr6	+	177	1	Intergenic	novelGene_9198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATTGTAATCAATT	NA	False	NA	NA	False	NA	NA	NA	26968336	26968513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_26968300_26968500
Isoform_160256_4	chr6	-	1724	1	Intergenic	novelGene_9584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120341019	120339295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120339300_120341000
Isoform_160257_3	chr6	-	2014	1	NIC	ENSMUSG00000030177.15	novel	2458	10	NA	NA	7	-8676	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120341310	120339296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_120339300_120341300
Isoform_160258_9	chr6	-	175	1	Intergenic	novelGene_9585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGT	9490	False	NA	NA	False	NA	NA	NA	120354869	120354694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120354700_120354900
Isoform_160259_43	chr6	-	176	1	Intergenic	novelGene_9586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGTAAGGAACT	NA	False	NA	NA	False	NA	NA	NA	120369532	120369356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120369400_120369500
Isoform_160265_4	chr6	+	175	1	Intergenic	novelGene_9199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	28102238	28102413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_28102200_28102400
Isoform_160266_70	chr6	-	187	1	Intergenic	novelGene_9587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAGAAGTGTA	786	False	NA	NA	False	NA	NA	NA	120472727	120472540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120472500_120472700
Isoform_160271_36	chr6	+	175	1	Intergenic	novelGene_9589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120571189	120571364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_120571200_120571400
Isoform_160272_89	chr6	-	178	1	Intergenic	novelGene_9590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATAACT	NA	False	NA	NA	False	NA	NA	NA	120600005	120599827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120599800_120600000
Isoform_160274_9	chr6	-	494	1	Intergenic	novelGene_9591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAACTAAAACCAAGC	NA	False	NA	NA	False	NA	NA	NA	120624726	120624232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120624200_120624700
Isoform_160276_185	chr6	-	225	1	Intergenic	novelGene_9592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTCCGTCTGCTAAG	NA	False	NA	NA	False	AATAAA	-22	NA	120624726	120624501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120624500_120624700
Isoform_160277_7	chr6	-	183	1	Intergenic	novelGene_9593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGGGGGGGGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	120660363	120660180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120660200_120660400
Isoform_160278_4	chr6	-	277	1	Intergenic	novelGene_9594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTTTAAAAAAAGGTGAA	NA	False	NA	NA	False	NA	NA	NA	120674551	120674274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120674300_120674600
Isoform_160279_4	chr6	-	1761	1	Antisense	novelGene_ENSMUSG00000071226.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	120713866	120712105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_120712100_120713900
Isoform_16028_4	chr11	-	2109	8	ISM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	32391	1	32346	-1	3prime_fragment	FALSE	canonical	3	28	junction_2	5.72498997414682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCGTCGCGCCTGCGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	97844879	97814064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708
Isoform_160281_15	chr6	-	177	1	Intergenic	novelGene_9595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	120761061	120760884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120760900_120761100
Isoform_160283_4	chr6	-	178	1	Intergenic	novelGene_9596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	120812527	120812349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120812300_120812500
Isoform_160284_7	chr6	-	1423	1	Intergenic	novelGene_9597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5833	False	NA	NA	False	NA	NA	NA	120816901	120815478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120815500_120816900
Isoform_160285_15	chr6	-	178	1	Intergenic	novelGene_9598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGGAACAAAGC	NA	False	NA	NA	False	NA	NA	NA	120827156	120826978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120827000_120827200
Isoform_160286_10	chr6	-	176	1	Intergenic	novelGene_9599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTATGATATTG	NA	False	NA	NA	False	NA	NA	NA	120830997	120830821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120830800_120831000
Isoform_160287_33	chr6	-	2259	1	Antisense	novelGene_ENSMUSG00000009112.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120849258	120846999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_120847000_120849300
Isoform_16029_86	chr11	-	2899	14	FSM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	-18	0	-18	0	multi-exon	FALSE	canonical	3	23	junction_9	6.65462423196374	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCGCGCCTGCGTGTA	6842	False	NA	-7	True	AATAAA	-17	NA	97877288	97814063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847393_97869328_97869508_97877063
Isoform_160292_3	chr6	+	1733	1	Intergenic	novelGene_9200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTTTAAGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	28262028	28263761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_28262000_28263800
Isoform_160293_9	chr6	+	1457	1	FSM	ENSMUSG00000108125.2	ENSMUST00000204935.2	318	1	-562	-577	-562	577	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGATAACAAACT	NA	False	NA	NA	False	AGTAAA	-18	NA	120885071	120886528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_120885100_120886500
Isoform_160298_5	chr6	-	2454	1	ISM	ENSMUSG00000051586.18	ENSMUST00000098457.9	6670	16	68978	14	1361	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATGAAAAATGTATT	5705	False	NA	NA	False	AATAAA	-28	NA	120911135	120908681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_120908700_120911100
Isoform_160299_3	chr6	-	2743	1	ISM	ENSMUSG00000051586.18	ENSMUST00000098457.9	6670	16	68690	13	1073	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATGAAAAATGTATTT	5417	False	NA	NA	False	AATAAA	-29	NA	120911423	120908680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_120908700_120911400
Isoform_1603_21	chr10	-	4277	8	FSM	ENSMUSG00000047712.9	ENSMUST00000061601.9	4228	8	5	-54	5	1	multi-exon	FALSE	canonical	1	9	junction_7	3.52252228741084	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCTTCTTTTTTAACG	NA	False	NA	NA	False	ATTAAA	-15	NA	8394584	8080518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
Isoform_160300_3	chr6	-	3114	1	ISM	ENSMUSG00000051586.18	ENSMUST00000098457.9	6670	16	68318	14	701	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATGAAAAATGTATT	5045	False	NA	NA	False	AATAAA	-28	NA	120911795	120908681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_120908700_120911800
Isoform_160302_3	chr6	-	1800	1	Genic_Genomic	ENSMUSG00000051586.18	novel	NA	NA	NA	NA	-55	-66257	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	121087109	121085309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_-_121085300_121087100
Isoform_160303_41	chr6	+	174	1	Intergenic	novelGene_9600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAGATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121149364	121149538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_121149400_121149500
Isoform_160305_12	chr6	+	189	1	Antisense	novelGene_ENSMUSG00000107915.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGCAAGCAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	121174343	121174532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_121174300_121174500
Isoform_160306_7	chr6	+	176	1	Intergenic	novelGene_9201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTATGCAC	NA	False	NA	NA	False	NA	NA	NA	28412809	28412985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_28412800_28413000
Isoform_160309_6	chr6	+	175	1	Intergenic	novelGene_9601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACACACTCTACCGAA	NA	False	NA	NA	False	NA	NA	NA	122232236	122232411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_122232200_122232400
Isoform_160310_4	chr6	+	176	1	Intergenic	novelGene_9602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTTTTTAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	122255687	122255863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_122255700_122255900
Isoform_160311_4	chr6	-	177	1	Intergenic	novelGene_9603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAACAATCAACTAAAC	6897	False	NA	NA	False	NA	NA	NA	122276338	122276161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122276200_122276300
Isoform_160318_12	chr6	-	176	1	Intergenic	novelGene_9604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCCATCT	NA	False	NA	NA	False	NA	NA	NA	122346908	122346732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122346700_122346900
Isoform_160319_11	chr6	+	171	1	Intergenic	novelGene_9605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATGTCTAGTTA	NA	False	NA	NA	False	NA	NA	NA	122395529	122395700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_122395500_122395700
Isoform_160328_14	chr6	-	183	1	Intergenic	novelGene_9606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCTTTTTTTGAGT	9136	False	NA	NA	False	NA	NA	NA	122485075	122484892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122484900_122485100
Isoform_16033_3	chr11	-	3044	14	FSM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	-166	3	-166	-3	multi-exon	FALSE	canonical	3	23	junction_9	6.65462423196374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCCGTCGCGCCTGCGT	6694	False	NA	-10	True	AATAAA	-14	NA	97877436	97814066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847393_97869328_97869508_97877063
Isoform_160333_12	chr6	-	202	1	Intergenic	novelGene_9607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTTTTTTGAG	8939	False	NA	NA	False	NA	NA	NA	122594158	122593956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122594000_122594200
Isoform_160335_7	chr6	-	156	1	Intergenic	novelGene_9608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATATAAAATAAAA	NA	False	NA	NA	False	AAAACA	-12	NA	122613230	122613074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122613100_122613200
Isoform_160336_78	chr6	-	175	1	Intergenic	novelGene_9609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGTGTTTACAGC	NA	False	NA	NA	False	NA	NA	NA	122619843	122619668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122619700_122619800
Isoform_160337_47	chr6	+	445	1	Intergenic	novelGene_9610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGAGGCCAGTAAAGACTG	NA	False	NA	NA	False	NA	NA	NA	122621250	122621695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_122621200_122621700
Isoform_160339_41	chr6	-	177	1	Intergenic	novelGene_9611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTGAGACAG	8872	False	NA	NA	False	NA	NA	NA	122626503	122626326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122626300_122626500
Isoform_16034_3	chr11	-	2921	14	FSM	ENSMUSG00000017417.15	ENSMUST00000107565.3	2439	14	-66	-416	-21	-2	multi-exon	FALSE	canonical	1	3	junction_12	10.3877488150122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCGTCGCGCCTGCGTG	6839	False	NA	-9	True	AATAAA	-15	NA	97877291	97814065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847414_97869328_97869508_97877063
Isoform_160345_9	chr6	-	180	1	Intergenic	novelGene_9612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGCTTGAGATGACTA	NA	False	NA	NA	False	NA	NA	NA	122658391	122658211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122658200_122658400
Isoform_160346_46	chr6	+	169	1	Intergenic	novelGene_9613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	5701	False	NA	NA	False	NA	NA	NA	122660306	122660475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_122660300_122660500
Isoform_160348_59	chr6	+	176	1	Intergenic	novelGene_9614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGACATAAACAA	NA	False	NA	NA	False	NA	NA	NA	122678663	122678839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_122678700_122678800
Isoform_160351_19	chr6	-	199	1	Intergenic	novelGene_9615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	122686539	122686340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122686300_122686500
Isoform_16036_4	chr11	-	1351	4	ISM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	1484	7	1232	-7	3prime_fragment	FALSE	canonical	1	2	junction_2	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAACGCCTCACTTCTT	NA	False	NA	-4	True	ATTAAA	-19	NA	97885523	97880410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163
Isoform_16037_13	chr11	-	1256	6	FSM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	312	3	60	-3	multi-exon	FALSE	canonical	1	2	junction_2	2.57681974534503	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCCTCACTTCTTATTT	NA	False	NA	0	True	ATTAAA	-23	NA	97886695	97880406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163_97885312_97885892_97885954_97886643
Isoform_160371_50	chr6	-	239	1	Intergenic	novelGene_9616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGCTGTCTTTCTTCC	650	False	NA	53	True	NA	NA	NA	122698414	122698175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122698200_122698400
Isoform_16038_4	chr11	-	1589	6	FSM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	-22	4	-22	-4	multi-exon	FALSE	canonical	1	2	junction_2	2.57681974534503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGCCTCACTTCTTATT	NA	False	NA	-1	True	ATTAAA	-22	NA	97887029	97880407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163_97885312_97885892_97885954_97886643
Isoform_16039_3	chr11	-	1163	5	NIC	ENSMUSG00000038352.16	novel	1571	6	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.39116499156263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCCTCACTTCTTATTT	NA	False	NA	0	True	ATTAAA	-23	NA	97886754	97880406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97881166_97884250_97884335_97885163_97885312_97885892_97885954_97886643
Isoform_16040_11	chr11	-	3392	14	FSM	ENSMUSG00000020882.18	ENSMUST00000017552.13	3396	14	-3	7	-3	-7	multi-exon	FALSE	canonical	2	14	junction_1	30.0140006777902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTGTTTTCTT	NA	False	NA	-7	True	TATAAA	-26	NA	97913463	97892340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_160405_31	chr6	-	177	1	Intergenic	novelGene_9617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAGAGGCTA	3983	False	NA	NA	False	NA	NA	NA	122766274	122766097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122766100_122766300
Isoform_160407_6	chr6	+	167	1	Intergenic	novelGene_9618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAAGTGAGG	6667	False	NA	NA	False	NA	NA	NA	122777368	122777535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_122777400_122777500
Isoform_160409_7	chr6	+	2385	1	FSM	ENSMUSG00000107868.2	ENSMUST00000204407.2	2368	1	-17	0	-17	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTGGCCCATTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	122788111	122790496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_122788100_122790500
Isoform_16041_5	chr11	-	3524	14	NNC	ENSMUSG00000020882.18	novel	2236	14	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.4543261683635	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTGTTTTCTT	NA	False	NA	-7	True	TATAAA	-26	NA	97913461	97892340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_97894189_97895954_97896141_97896514_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_160413_3	chr6	-	284	1	Intergenic	novelGene_9619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTATTTTAAAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	122862140	122861856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122861900_122862100
Isoform_160414_5	chr6	-	173	1	Intergenic	novelGene_9620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGAGCAAGCGGGGTC	NA	False	NA	NA	False	NA	NA	NA	122862140	122861967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_122862000_122862100
Isoform_160417_69	chr6	-	205	1	Intergenic	novelGene_9621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	8865	False	NA	NA	False	NA	NA	NA	123253141	123252936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_123252900_123253100
Isoform_160418_15	chr6	+	179	1	Intergenic	novelGene_9622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAGTCATAGATGC	NA	False	NA	NA	False	NA	NA	NA	124365453	124365632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_124365500_124365600
Isoform_16042_3	chr11	-	2940	10	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-461	-14	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	32.401798456411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCACCTCCTGAGCCTG	NA	False	NA	-14	True	TATAAA	-19	NA	97903838	97892347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637
Isoform_160422_9	chr6	+	159	1	Intergenic	novelGene_9623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7395	False	NA	NA	False	NA	NA	NA	124500571	124500730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_124500600_124500700
Isoform_16043_8	chr11	-	3364	13	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-2	-7	combination_of_known_junctions	TRUE	canonical	2	14	junction_1	28.323895486948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTGTTTTCTT	NA	False	NA	-7	True	TATAAA	-26	NA	97913455	97892340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_160432_166	chr6	-	188	1	Intergenic	novelGene_9202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	28786353	28786165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_28786200_28786400
Isoform_160433_16	chr6	+	205	1	Intergenic	novelGene_9624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAAAGAAAGTTAAGCC	NA	False	NA	NA	False	NA	NA	NA	124762437	124762642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_124762400_124762600
Isoform_160434_16	chr6	+	247	1	Intergenic	novelGene_9625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAGAGTGGACCTCAT	NA	False	NA	NA	False	AAGAAA	-32	NA	124762438	124762685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_124762400_124762700
Isoform_160435_3	chr6	-	178	1	Intergenic	novelGene_9626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAACAAAAAGAAAAAAATA	4880	False	NA	NA	False	NA	NA	NA	124764679	124764501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_124764500_124764700
Isoform_160436_10	chr6	-	180	1	Intergenic	novelGene_9627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTATTTATATGAGTA	3365	False	NA	NA	False	NA	NA	NA	124766194	124766014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_124766000_124766200
Isoform_160437_14	chr6	+	202	1	Intergenic	novelGene_9628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCTGTGATTAAGAGGT	NA	False	NA	NA	False	NA	NA	NA	124768357	124768559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_124768400_124768600
Isoform_160438_4	chr6	-	5460	1	Antisense	novelGene_ENSMUSG00000103899.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAGAAAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	28802888	28797428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_28797400_28802900
Isoform_160439_5	chr6	-	5197	1	Intergenic	novelGene_9629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	1152	False	NA	NA	False	NA	NA	NA	124779306	124774109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_124774100_124779300
Isoform_16044_4	chr11	-	3133	12	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-2	0	intron_retention	FALSE	canonical	2	13	junction_5	28.7982437481039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913455	97895750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_160442_4	chr6	-	166	1	Intergenic	novelGene_9630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	124781404	124781238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_124781200_124781400
Isoform_160449_10	chr6	-	210	1	Intergenic	novelGene_9631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTCCCCATATTTCTA	9759	False	NA	NA	False	NA	NA	NA	124808287	124808077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_124808100_124808300
Isoform_160454_4	chr6	-	173	1	Intergenic	novelGene_9632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	9838	False	NA	NA	False	NA	NA	NA	124855465	124855292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_124855300_124855500
Isoform_160456_29	chr6	+	171	1	Intergenic	novelGene_9633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	124900611	124900782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_124900600_124900800
Isoform_160457_46	chr6	+	176	1	Intergenic	novelGene_9634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	124901229	124901405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_124901200_124901400
Isoform_160459_47	chr6	-	186	1	Intergenic	novelGene_9635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	3983	False	NA	NA	False	NA	NA	NA	124916123	124915937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_124915900_124916100
Isoform_16046_33	chr11	-	1759	13	FSM	ENSMUSG00000020882.18	ENSMUST00000107562.2	1745	13	-14	0	-14	0	multi-exon	FALSE	canonical	3	23	junction_7	26.3358384884341	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913474	97895750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_160462_1224	chr6	+	246	1	Intergenic	novelGene_9636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTCTTTCTTTCTT	4335	False	NA	NA	False	NA	NA	NA	124919251	124919497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_124919300_124919500
Isoform_160466_6	chr6	-	179	1	Intergenic	novelGene_9637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATTCCTTTGACCCT	NA	False	NA	NA	False	NA	NA	NA	124972745	124972566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_124972600_124972700
Isoform_160467_18	chr6	+	173	1	Intergenic	novelGene_9638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	124985220	124985393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_124985200_124985400
Isoform_160468_57	chr6	-	177	1	Antisense	novelGene_ENSMUSG00000030330.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125022568	125022391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_125022400_125022600
Isoform_160469_9	chr6	-	847	1	Antisense	novelGene_ENSMUSG00000030330.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125023237	125022390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_125022400_125023200
Isoform_16047_26	chr11	-	1876	13	FSM	ENSMUSG00000020882.18	ENSMUST00000092736.11	1880	13	4	0	-3	0	multi-exon	FALSE	canonical	3	20	junction_6	26.3832596335041	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913456	97895750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_160470_511	chr2	-	177	1	Intergenic	novelGene_6617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	511	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150730772	150730595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_150730600_150730800
Isoform_160471_4	chr6	-	155	1	Intergenic	novelGene_9640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATGAATGAATGAAT	2207	False	NA	NA	False	NA	NA	NA	125047643	125047488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_125047500_125047600
Isoform_160472_13	chr6	-	176	1	Intergenic	novelGene_9641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125083279	125083103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_125083100_125083300
Isoform_160476_41	chr6	-	198	1	Intergenic	novelGene_9642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTAGGGTACGGT	NA	False	NA	NA	False	AATAAA	-7	NA	125108182	125107984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_125108000_125108200
Isoform_160481_3	chr6	-	3742	1	FSM	ENSMUSG00000057666.19	ENSMUST00000192506.2	3289	1	-594	141	6	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCTCCTTGGTTTTAA	NA	False	NA	-18	True	AATAAA	-12	NA	125142560	125138818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_125138800_125142600
Isoform_160485_27	chr6	-	174	1	Intergenic	novelGene_9643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAAGAAAAAG	8647	False	NA	NA	False	NA	NA	NA	125160346	125160172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_125160200_125160300
Isoform_160487_4	chr6	-	397	1	Intergenic	novelGene_9644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAACTAAAAAAAAAAGGT	4852	False	NA	NA	False	AATACA	-37	NA	125236818	125236421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_125236400_125236800
Isoform_16049_17	chr11	-	1721	12	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	22.8711807541917	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913456	97895750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_160492_58	chr6	+	177	1	Intergenic	novelGene_9645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	125306335	125306512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125306300_125306500
Isoform_160496_5	chr6	+	237	1	Intergenic	novelGene_9646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAAAGAAGA	NA	False	NA	NA	False	AATAAA	-11	NA	125378939	125379176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125378900_125379200
Isoform_160498_337	chr6	+	168	1	Intergenic	novelGene_9647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGGA	NA	False	NA	21	True	NA	NA	NA	125389668	125389836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125389700_125389800
Isoform_160499_8	chr6	+	201	1	Intergenic	novelGene_9648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATTTTATTGTATT	NA	False	NA	NA	False	NA	NA	NA	125390771	125390972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125390800_125391000
Isoform_1605_5	chr10	-	7189	20	FSM	ENSMUSG00000015305.7	ENSMUST00000015449.6	7183	20	-4	-2	-4	2	multi-exon	FALSE	canonical	1	3	junction_11	2.30139064306057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTCTCTGGTTGTTCC	779	False	NA	-7	True	AATAAA	-15	NA	8761818	8597980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_8601525_8603621_8603754_8605091_8606201_8609359_8609474_8615084_8615236_8615937_8616148_8617191_8617362_8618191_8618328_8620251_8620396_8621879_8621955_8626902_8627250_8632392_8632526_8656282_8656385_8659961_8660075_8662111_8662199_8665324_8665366_8690004_8690055_8690170_8690222_8726106_8726236_8761467
Isoform_160502_4	chr6	+	252	1	Intergenic	novelGene_9649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTAATTCTTTAGTAAA	NA	False	NA	NA	False	NA	NA	NA	125409286	125409538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125409300_125409500
Isoform_160503_197	chr6	+	176	1	Intergenic	novelGene_9656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGACTTATTT	762	False	NA	NA	False	NA	NA	NA	125433540	125433716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125433500_125433700
Isoform_16051_7	chr11	-	3608	10	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-15	0	intron_retention	FALSE	canonical	3	63	junction_8	15.475986974649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913475	97895750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_160511_152	chr6	+	194	1	Intergenic	novelGene_9657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTTTTCTTTAGGTC	3236	False	NA	6	True	NA	NA	NA	125556202	125556396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_125556200_125556400
Isoform_160513_33	chr6	-	206	1	Intergenic	novelGene_9658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAAGCGTGGATTGAG	NA	False	NA	NA	False	NA	NA	NA	126786104	126785898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_126785900_126786100
Isoform_160515_3	chr6	+	195	1	Intergenic	novelGene_9659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGTAGTACAGGAGCT	NA	False	NA	NA	False	NA	NA	NA	126875050	126875245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_126875000_126875200
Isoform_160517_4	chr6	-	3228	1	NIC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	4	-7678	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5269	False	NA	NA	False	NA	NA	NA	126916546	126913318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_126913300_126916500
Isoform_160519_3	chr6	+	176	1	Intergenic	novelGene_9661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGACTTTAG	NA	False	NA	NA	False	NA	NA	NA	127054577	127054753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_127054600_127054800
Isoform_160521_3	chr6	+	164	1	Intergenic	novelGene_9662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTAGGGATCGTTTCC	NA	False	NA	NA	False	NA	NA	NA	127085005	127085169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_127085000_127085200
Isoform_160522_3	chr6	+	176	1	Intergenic	novelGene_9663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGACTCAGAATAC	NA	False	NA	NA	False	NA	NA	NA	127335572	127335748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_127335600_127335700
Isoform_160524_10	chr6	+	154	1	Intergenic	novelGene_9203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGGGGCTATAAGGAA	NA	False	NA	NA	False	AATAAA	-6	NA	29241225	29241379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29241200_29241400
Isoform_160525_3	chr6	-	2522	1	NIC	ENSMUSG00000030350.9	novel	2724	10	NA	NA	37	-77903	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAATAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	127746398	127743876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_127743900_127746400
Isoform_160529_91	chr6	+	181	1	Intergenic	novelGene_9664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGTGAATAC	NA	False	NA	NA	False	NA	NA	NA	128184733	128184914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_128184700_128184900
Isoform_16053_24	chr11	-	3046	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	2	2	2	-2	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGCCTGCTTGGTGTA	5361	False	NA	-4	True	ATTAAA	-13	NA	97944286	97927450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
Isoform_160530_29	chr6	+	175	1	Intergenic	novelGene_9204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGTACTTTTTCT	6852	False	NA	5	True	NA	NA	NA	29255505	29255680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29255500_29255700
Isoform_160534_9	chr6	+	3168	1	Intergenic	novelGene_9665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCACATCCATTTAC	NA	False	NA	NA	False	TATAAA	-39	NA	128213958	128217126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_128214000_128217100
Isoform_160537_3	chr6	+	614	1	FSM	ENSMUSG00000053173.13	ENSMUST00000118863.2	567	1	-18	-29	-18	29	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCATTGGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128290301	128290915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_128290300_128290900
Isoform_160538_10	chr6	-	223	1	Intergenic	novelGene_9666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTTAATCGTTTCCAG	9014	False	NA	NA	False	NA	NA	NA	128291820	128291597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128291600_128291800
Isoform_16054_79	chr11	-	2941	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	107	2	107	-2	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGCCTGCTTGGTGTA	5466	False	NA	-4	True	ATTAAA	-13	NA	97944181	97927450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
Isoform_160541_4	chr6	-	188	1	Intergenic	novelGene_9205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCCCAGCACTAGAGAAG	5192	False	NA	NA	False	NA	NA	NA	29275840	29275652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_29275700_29275800
Isoform_160542_8	chr6	-	184	1	Intergenic	novelGene_9667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGCCCACATAGGCACA	NA	False	NA	NA	False	NA	NA	NA	128343896	128343712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128343700_128343900
Isoform_160546_130	chr6	-	185	1	Intergenic	novelGene_9668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACTTATTTTTTAAAAA	NA	False	NA	-2	True	AATACA	-6	NA	128365589	128365404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128365400_128365600
Isoform_160547_8	chr6	-	158	1	Intergenic	novelGene_9699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	135855649	135855491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_135855500_135855600
Isoform_160549_3	chr6	+	500	1	Intergenic	novelGene_9206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAAAACATGTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	29298426	29298926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29298400_29298900
Isoform_160561_3	chr6	-	175	1	Intergenic	novelGene_9207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTTTTTTTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	29310629	29310454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_29310500_29310600
Isoform_160562_23	chr6	-	180	1	Intergenic	novelGene_9669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	128444151	128443971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128444000_128444200
Isoform_160564_6	chr6	+	229	1	Intergenic	novelGene_9670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCCCCACCTCCCACT	NA	False	NA	NA	False	NA	NA	NA	128457371	128457600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_128457400_128457600
Isoform_160565_25	chr6	-	204	1	Intergenic	novelGene_9671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	128460413	128460209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128460200_128460400
Isoform_160566_34	chr6	-	176	1	Intergenic	novelGene_9672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	128461267	128461091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128461100_128461300
Isoform_16057_338	chr11	-	2423	15	FSM	ENSMUSG00000020883.19	ENSMUST00000103143.10	8601	15	30	6148	24	2387	multi-exon	FALSE	canonical	3	137	junction_5	8.14567620374923	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTACCATCAGGGGACC	3195	False	NA	-16	True	AATAAA	-16	NA	98040408	97979529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
Isoform_160571_5	chr6	+	169	1	Intergenic	novelGene_9673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAAAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	128588996	128589165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_128589000_128589200
Isoform_160572_20	chr6	-	184	1	Intergenic	novelGene_9674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTTTGGAAAAAAGTACAA	1017	False	NA	NA	False	NA	NA	NA	128599048	128598864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128598900_128599000
Isoform_160573_3	chr6	-	222	1	Intergenic	novelGene_9675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCCTTAGATTCACTTT	5508	False	NA	NA	False	AATAAA	-7	NA	128617376	128617154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128617200_128617400
Isoform_160574_314	chr6	+	2212	1	FSM	ENSMUSG00000037827.6	ENSMUST00000036712.6	1479	1	-34	-699	-34	699	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128621841	128624053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_128621800_128624100
Isoform_16058_4	chr11	-	2205	15	FSM	ENSMUSG00000020883.19	ENSMUST00000103143.10	8601	15	2	6394	2	2141	multi-exon	FALSE	canonical	3	137	junction_5	8.14567620374923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCACTGTATGTCACT	3167	False	NA	NA	False	AATAGA	-22	NA	98040436	97979775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
Isoform_160582_8	chr11	-	176	1	Intergenic	novelGene_2081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATTGTTTTTAAT	5878	False	NA	NA	False	NA	NA	NA	97722505	97722329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97722300_97722500
Isoform_160583_67	chr6	-	154	1	Intergenic	novelGene_9676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGGAAGAATAGAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	128737138	128736984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128737000_128737100
Isoform_160588_80	chr6	-	168	1	Intergenic	novelGene_9677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	128775922	128775754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128775800_128775900
Isoform_16059_40	chr11	-	2497	15	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-46	2394	combination_of_known_junctions	TRUE	canonical	3	15	junction_14	36.7548414137095	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGGGGACCCTGCCTG	2328	False	NA	-9	True	AATAAA	-23	NA	98041275	97979522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
Isoform_160591_15	chr6	+	184	1	Intergenic	novelGene_9678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAATGATTTAAATAAA	NA	False	NA	NA	False	GATAAA	-41	NA	128816012	128816196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_128816000_128816200
Isoform_160594_3	chr6	-	314	1	Intergenic	novelGene_9679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAAAGAAA	5600	False	NA	NA	False	NA	NA	NA	128834035	128833721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_128833700_128834000
Isoform_160597_50	chr12	-	177	1	Intergenic	novelGene_2743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8863	False	NA	NA	False	NA	NA	NA	86888159	86887982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_86888000_86888200
Isoform_16060_11	chr11	-	2373	14	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	19	2387	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	38.3036760328971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTACCATCAGGGGACC	3190	False	NA	-16	True	AATAAA	-16	NA	98040413	97979529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98019140_98019203_98040141
Isoform_160605_3	chr5	-	178	1	Intergenic	novelGene_8655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTACAG	NA	False	NA	NA	False	NA	NA	NA	98435486	98435308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_98435300_98435500
Isoform_160607_4	chr6	-	745	1	Antisense	novelGene_ENSMUSG00000072704.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133082623	133081878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_133081900_133082600
Isoform_160608_45	chr6	+	2458	1	FSM	ENSMUSG00000072704.7	ENSMUST00000100864.7	2842	1	379	5	-2	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTGTGTCTCCTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	133082250	133084708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_133082200_133084700
Isoform_160613_14	chr6	-	172	1	Intergenic	novelGene_9680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAATAAAACTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	133195750	133195578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_133195600_133195800
Isoform_16062_4	chr11	-	3342	6	ISM	ENSMUSG00000020883.19	ENSMUST00000135969.8	4028	12	11	15697	11	2730	5prime_fragment	FALSE	canonical	3	146	junction_3	7.863841300535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	3182	False	NA	NA	False	NA	NA	NA	98040421	97997613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
Isoform_160621_87	chr6	-	176	1	Intergenic	novelGene_9681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	134274230	134274054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_134274100_134274200
Isoform_160622_3	chr6	+	169	1	Intergenic	novelGene_9682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAACAGACTGGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	134310058	134310227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_134310100_134310200
Isoform_160623_4	chr6	-	4324	1	Intergenic	novelGene_9683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134326829	134322505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_134322500_134326800
Isoform_16063_25	chr11	-	2644	18	FSM	ENSMUSG00000018160.16	ENSMUST00000092735.12	2627	18	-25	8	8	-7	multi-exon	FALSE	canonical	3	35	junction_1	53.6447367918524	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAATGTGCCTCTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	98084111	98042987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98043790_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_160631_7	chr6	-	1767	1	Antisense	novelGene_ENSMUSG00000029767.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAGTTAAGTGAGA	3852	False	NA	NA	False	NA	NA	NA	29376666	29374899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_29374900_29376700
Isoform_16064_55	chr11	-	2804	18	NIC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	-7	-7	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	56.1624559050546	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAATGTGCCTCTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	98084109	98042987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_160642_6	chr6	+	1390	1	Intergenic	novelGene_9684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATCAAATAAAAAAAA	6827	False	NA	NA	False	NA	NA	NA	134421328	134422718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_134421300_134422700
Isoform_160648_36	chr6	-	177	1	Intergenic	novelGene_9685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCACTGCTTT	NA	False	NA	NA	False	NA	NA	NA	134524883	134524706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_134524700_134524900
Isoform_160650_23	chr6	-	186	1	Intergenic	novelGene_9687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	134617723	134617537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_134617500_134617700
Isoform_160651_13	chr6	+	174	1	Intergenic	novelGene_9688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGATCAAGTCAT	6505	False	NA	NA	False	NA	NA	NA	134647613	134647787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_134647600_134647800
Isoform_160652_24	chr6	+	173	1	Intergenic	novelGene_9208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTGGAAAGC	NA	False	NA	NA	False	NA	NA	NA	29390686	29390859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29390700_29390900
Isoform_160654_43	chr6	-	175	1	Intergenic	novelGene_9689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	134675207	134675032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_134675000_134675200
Isoform_160658_4	chr6	+	438	1	Intergenic	novelGene_9209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAAGAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	29391451	29391889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29391500_29391900
Isoform_160659_28	chr6	-	206	1	Intergenic	novelGene_9690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTATAGTGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	134726029	134725823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_134725800_134726000
Isoform_16066_220	chr11	-	2508	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	1	294	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCTGACCTTATTGCAG	NA	False	NA	-8	True	AATGAA	-15	NA	98084101	98048284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_160662_7	chr6	+	340	1	Intergenic	novelGene_9692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134752835	134753175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_134752800_134753200
Isoform_160663_9	chr6	+	2821	1	Intergenic	novelGene_9693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	134761637	134764458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_134761600_134764500
Isoform_160664_14	chr6	+	184	1	Intergenic	novelGene_9694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTGTTTAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	134788511	134788695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_134788500_134788700
Isoform_160666_21	chr6	-	177	1	Intergenic	novelGene_9695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCTAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	134853395	134853218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_134853200_134853400
Isoform_160667_5	chr6	+	246	1	Intergenic	novelGene_9210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCAGCACTGGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	29459926	29460172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29459900_29460200
Isoform_160668_18	chr6	+	1299	1	Intergenic	novelGene_9696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCAAAAAAAACCCTAA	3407	False	NA	NA	False	NA	NA	NA	134861791	134863090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_134861800_134863100
Isoform_160669_3	chr6	-	1316	2	Antisense	novelGene_ENSMUSG00000098318.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACGCA	1262	False	NA	NA	False	NA	NA	NA	134927192	134925832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_134926995_134927038
Isoform_16067_14	chr11	-	2569	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	-7	347	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCATTTTTTCCCTGAT	NA	False	NA	45	True	NA	NA	NA	98084109	98048231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_160670_13	chr6	+	176	1	ISM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	25667	1864	25604	-1864	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAACACAGTAAAA	2580	False	NA	NA	False	NA	NA	NA	134931721	134931897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_134931700_134931900
Isoform_160678_6	chr6	-	172	1	Intergenic	novelGene_9697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGAGAGAGCGGGATCG	NA	False	NA	NA	False	NA	NA	NA	135206415	135206243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_135206200_135206400
Isoform_160679_11	chr6	-	194	1	Intergenic	novelGene_9698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAAGGTAAGAAGAGGA	7889	False	NA	NA	False	NA	NA	NA	135246454	135246260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_135246300_135246500
Isoform_16068_6	chr11	-	2740	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	1	509	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCTTGGAGGTGACAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	98084118	98048069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_160684_85	chr1	-	177	1	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44568666	44568489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_44568500_44568700
Isoform_160687_6	chr6	+	3292	1	FSM	ENSMUSG00000030213.13	ENSMUST00000185936.2	5552	1	0	2260	0	-2260	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGCGTTTCT	7092	False	NA	NA	False	NA	NA	NA	136495843	136499135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_136495800_136499100
Isoform_160691_4	chr6	+	3325	1	ISM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	88719	17	11935	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGAGTACCCTGACTC	8184	False	NA	16	True	AATAAA	-16	NA	136584518	136587843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_136584500_136587800
Isoform_160693_4	chr6	+	2135	1	ISM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	89914	12	13130	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACCCTGACTCATTCC	9379	False	NA	21	True	AATAAA	-21	NA	136585713	136587848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_136585700_136587800
Isoform_160694_4	chr6	+	2071	1	ISM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	89971	19	13187	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	9436	False	NA	14	True	AATAAA	-14	NA	136585770	136587841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_136585800_136587800
Isoform_160697_32	chr6	+	576	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	-25	1280	-25	-999	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTAGAGAGCTGTGTA	NA	False	NA	20	True	AATAAA	-16	NA	136785216	136785792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_136785200_136785800
Isoform_160698_888	chr6	+	501	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	51	1279	-38	-998	mono-exon	FALSE	NA	NA	NA	NA	NA	888	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTAGAGAGCTGTGTAG	NA	False	NA	21	True	AATAAA	-17	NA	136785292	136785793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_136785300_136785800
Isoform_160699_119	chr6	+	1768	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	57	6	-32	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTCTTGACAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	136785298	136787066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_136785300_136787100
Isoform_1607_3	chr10	-	1096	4	FSM	ENSMUSG00000015305.7	ENSMUST00000213032.2	1078	4	-11	-7	7	7	multi-exon	FALSE	canonical	3	6	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	790	False	NA	NA	False	NA	NA	NA	8761807	8689478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_8690055_8690170_8690222_8726106_8726236_8761467
Isoform_16070_90	chr11	-	2710	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	10	5304	-7	294	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCTGACCTTATTGCAG	NA	False	NA	-8	True	AATGAA	-15	NA	98084109	98048284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_160706_4	chr6	+	163	1	Intergenic	novelGene_9700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGGAAGTTTAGGG	NA	False	NA	NA	False	NA	NA	NA	136791712	136791875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_136791700_136791900
Isoform_160707_4	chr6	+	181	1	Intergenic	novelGene_9701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	136791895	136792076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_136791900_136792100
Isoform_160708_11	chr6	+	172	1	Intergenic	novelGene_9211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATTAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29602949	29603121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29602900_29603100
Isoform_160709_13	chr6	-	180	1	Intergenic	novelGene_9702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGGAGAGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	136862044	136861864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_136861900_136862000
Isoform_160710_59	chr6	+	187	1	Intergenic	novelGene_9703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATCTACTTAGTT	307	False	NA	NA	False	NA	NA	NA	136954832	136955019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_136954800_136955000
Isoform_160711_40	chr6	+	172	1	Intergenic	novelGene_9212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29604333	29604505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29604300_29604500
Isoform_160712_12	chr6	-	176	1	Intergenic	novelGene_9704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTATTTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	137378400	137378224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_137378200_137378400
Isoform_160714_12	chr6	+	201	1	Intergenic	novelGene_9706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGTCCCAATAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	137643097	137643298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_137643100_137643300
Isoform_160716_3	chr6	+	182	1	Intergenic	novelGene_9213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29626514	29626696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29626500_29626700
Isoform_160717_20	chr6	+	163	1	Intergenic	novelGene_9707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGCAAACAGTGAG	NA	False	NA	NA	False	NA	NA	NA	138948357	138948520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_138948400_138948500
Isoform_160718_41	chr6	+	188	1	Intergenic	novelGene_9708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140309247	140309435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_140309200_140309400
Isoform_160720_26	chr6	+	180	1	Intergenic	novelGene_9709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAGGTATATTTTAT	NA	False	NA	NA	False	NA	NA	NA	140377534	140377714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_140377500_140377700
Isoform_160722_16	chr6	+	176	1	Intergenic	novelGene_9710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	140392704	140392880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_140392700_140392900
Isoform_160724_9	chr6	+	193	1	Intergenic	novelGene_9711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTGCTAATCATGTTG	NA	False	NA	NA	False	NA	NA	NA	140475353	140475546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_140475400_140475500
Isoform_160726_37	chr6	-	177	1	Intergenic	novelGene_9178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	4564607	4564430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_4564400_4564600
Isoform_160728_5	chr6	-	171	1	Intergenic	novelGene_9712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATTAAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	140587443	140587272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_140587300_140587400
Isoform_16073_26	chr11	-	8006	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	10	8	-7	-8	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTGCCTCTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98084109	98042988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_160735_6	chr6	+	165	1	Intergenic	novelGene_9713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACAACAGAATA	2543	False	NA	NA	False	NA	NA	NA	140627301	140627466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_140627300_140627500
Isoform_160739_18	chr6	+	192	1	Intergenic	novelGene_9215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29648395	29648587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29648400_29648600
Isoform_16074_43	chr11	-	2141	16	ISM	ENSMUSG00000018160.16	ENSMUST00000092735.12	2627	18	-16	8334	0	-2735	5prime_fragment	FALSE	canonical	3	176	junction_2	32.5798847279865	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGTTGCCTCCATAGA	NA	False	NA	NA	False	AATAAA	-20	NA	98084102	98051313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_160741_4	chr6	-	822	1	Intergenic	novelGene_9714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	141546992	141546170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_141546200_141547000
Isoform_160742_26	chr6	+	179	1	Intergenic	novelGene_9715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTATCTCTGGGA	NA	False	NA	NA	False	NA	NA	NA	141908577	141908756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_141908600_141908800
Isoform_160743_3	chr6	-	2098	1	NIC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	-5	-8025	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAAACCAA	6226	False	NA	NA	False	NA	NA	NA	142332767	142330669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_-_142330700_142332800
Isoform_160744_20	chr6	-	172	1	Intergenic	novelGene_9716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	142420452	142420280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_142420300_142420500
Isoform_160746_116	chr6	-	178	1	Intergenic	novelGene_9216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCAC	8370	False	NA	NA	False	NA	NA	NA	29661545	29661367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_29661400_29661500
Isoform_160752_206	chr6	-	176	1	Intergenic	novelGene_9717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	142969069	142968893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_142968900_142969100
Isoform_160753_3	chr6	+	2455	1	Intergenic	novelGene_9718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	143036973	143039428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_143037000_143039400
Isoform_160754_3	chr6	-	217	1	Intergenic	novelGene_9719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGGAGGAAATAGACTTC	6688	False	NA	NA	False	NA	NA	NA	143051223	143051006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_143051000_143051200
Isoform_160755_14	chr6	+	1607	1	NIC	ENSMUSG00000030275.7	novel	1791	8	NA	NA	8	-23438	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATCTTACTAATTAAAG	NA	False	NA	NA	False	AATAAA	-14	NA	143112963	143114570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_143113000_143114600
Isoform_160756_14	chr6	-	246	1	Intergenic	novelGene_9720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTTAAGTATTTTTT	NA	False	NA	NA	False	GATAAA	-3	NA	143147921	143147675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_143147700_143147900
Isoform_16076_26	chr11	-	1379	10	FSM	ENSMUSG00000018160.16	ENSMUST00000129557.2	1372	10	-7	0	-7	0	multi-exon	FALSE	canonical	3	39	junction_1	68.4675285747617	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGACTTTGCATATTT	NA	False	NA	NA	False	AATAAA	-15	NA	98084109	98060736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98061267_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_16078_72	chr11	-	2398	8	FSM	ENSMUSG00000038208.14	ENSMUST00000090827.12	2419	8	21	0	21	0	multi-exon	FALSE	canonical	3	39	junction_7	8.7084289452161	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTCTGCTACTCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	98291295	98279502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
Isoform_160787_227	chr6	+	186	1	Intergenic	novelGene_9721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	144301074	144301260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_144301100_144301300
Isoform_16079_112	chr11	-	2338	8	FSM	ENSMUSG00000038208.14	ENSMUST00000090827.12	2419	8	81	0	5	0	multi-exon	FALSE	canonical	3	39	junction_7	8.7084289452161	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTCTGCTACTCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	98291235	98279502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
Isoform_160798_5	chr6	-	169	1	Intergenic	novelGene_9217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTTAAAAAAAGAGTTC	NA	False	NA	NA	False	NA	NA	NA	29685296	29685127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_29685100_29685300
Isoform_1608_8	chr10	-	4981	28	FSM	ENSMUSG00000019790.18	ENSMUST00000038213.14	8825	28	-562	4406	-166	5	multi-exon	FALSE	canonical	2	7	junction_7	6.89744590012349	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTATCATTTCAGTAA	5840	False	NA	1	True	ATTAAA	-16	NA	9776989	9635696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
Isoform_160802_5	chr6	+	230	1	Intergenic	novelGene_9723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	145025715	145025945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_145025700_145025900
Isoform_160804_5	chr6	+	156	1	Intergenic	novelGene_9218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	29691841	29691997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29691800_29692000
Isoform_160821_28	chr6	+	3005	1	Antisense	novelGene_ENSMUSG00000030256.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145804740	145807745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_145804700_145807700
Isoform_160822_9	chr6	+	185	1	Genic_Genomic	ENSMUSG00000001763.15	novel	NA	NA	NA	NA	6625	15	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGGCAATCATACTGTA	NA	False	NA	NA	False	NA	NA	NA	29714651	29714836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr6_+_29714700_29714800
Isoform_160824_10	chr6	+	192	1	Intergenic	novelGene_9724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATTTTCAACCTCAT	NA	False	NA	NA	False	NA	NA	NA	146197763	146197955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_146197800_146198000
Isoform_160825_5	chr6	+	172	1	Intergenic	novelGene_9725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTTTTAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	146250408	146250580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_146250400_146250600
Isoform_16083_316	chr11	-	740	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	-7	14	-7	-14	multi-exon	FALSE	canonical	3	749	junction_2	62.9567752950829	316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTGTGTCAACTGGCG	NA	False	NA	-13	True	AATAAA	-12	NA	98329824	98328547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
Isoform_160831_17	chr6	+	1089	1	FSM	ENSMUSG00000030291.13	ENSMUST00000203416.2	1395	1	11	295	-1	-295	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	146544087	146545176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_146544100_146545200
Isoform_160832_17	chr6	+	174	1	Intergenic	novelGene_9726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGGTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	146563609	146563783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_146563600_146563800
Isoform_160835_17	chr6	+	176	1	Intergenic	novelGene_9219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAATTTCCT	NA	False	NA	NA	False	NA	NA	NA	29730378	29730554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29730400_29730600
Isoform_160836_16	chr6	+	205	1	Intergenic	novelGene_9727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTAAACATTAAGAAAAT	5499	False	NA	NA	False	NA	NA	NA	146938950	146939155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_146939000_146939200
Isoform_160837_7	chr6	+	179	1	Intergenic	novelGene_9728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGATGCTCCAACCA	NA	False	NA	NA	False	NA	NA	NA	146984520	146984699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_146984500_146984700
Isoform_160838_9	chr6	-	217	1	Intergenic	novelGene_9220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTGCTTGTATACTA	NA	False	NA	NA	False	NA	NA	NA	29741480	29741263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_29741300_29741500
Isoform_160841_5	chr16	+	176	1	Intergenic	novelGene_4374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	18659227	18659403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18659200_18659400
Isoform_160844_185	chr6	+	971	1	FSM	ENSMUSG00000063171.5	ENSMUST00000071745.4	943	1	-28	0	-28	0	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGCATATGTTTC	NA	False	NA	13	True	ATTAAA	-17	NA	148256125	148257096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_148256100_148257100
Isoform_160845_10393	chr6	+	943	1	FSM	ENSMUSG00000063171.5	ENSMUST00000071745.4	943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10393	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGCATATGTTTC	NA	False	NA	13	True	ATTAAA	-17	NA	148256153	148257096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_148256200_148257100
Isoform_160858_3	chr6	+	1715	1	Antisense	novelGene_ENSMUSG00000030306.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACCAAAGAGCAACA	NA	False	NA	NA	False	NA	NA	NA	148341627	148343342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_148341600_148343300
Isoform_16086_441	chr11	-	2057	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	124	3	124	-3	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTGGCCTCTGCTTC	1447	False	NA	-2	True	AATAAA	-20	NA	98478070	98472084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
Isoform_160860_17	chr6	+	2130	1	FSM	ENSMUSG00000029772.18	ENSMUST00000201282.2	2146	1	-16	32	2	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAATTAAAAAAAAAGAAA	-27	True	NA	NA	False	AATACA	-33	NA	29768480	29770610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_29768500_29770600
Isoform_160861_43	chr6	-	184	1	Intergenic	novelGene_9729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTGTTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	148660428	148660244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_148660200_148660400
Isoform_160865_36	chr6	+	184	1	Intergenic	novelGene_9730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	148748728	148748912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_148748700_148748900
Isoform_160867_6	chr8	-	176	1	Intergenic	novelGene_10778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAATAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	85723426	85723250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_85723200_85723400
Isoform_160883_20	chr6	+	209	1	Intergenic	novelGene_9732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAAATTTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	148830833	148831042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_148830800_148831000
Isoform_160884_3	chr6	+	153	1	Antisense	novelGene_ENSMUSG00000039985.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGCAGAAAGAATACAGG	2497	False	NA	NA	False	NA	NA	NA	148834048	148834201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_148834000_148834200
Isoform_160887_128	chr6	-	176	1	Intergenic	novelGene_9221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAATGTATACATAGA	NA	False	NA	NA	False	NA	NA	NA	29777092	29776916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_29776900_29777100
Isoform_160891_64	chr6	+	173	1	Intergenic	novelGene_9735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	148870117	148870290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_148870100_148870300
Isoform_160892_9	chr6	+	158	1	Intergenic	novelGene_9736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	148880605	148880763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_148880600_148880800
Isoform_160893_114	chr6	-	156	1	Intergenic	novelGene_9222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATAGAGCTAGCA	NA	False	NA	NA	False	NA	NA	NA	29780752	29780596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_29780600_29780800
Isoform_160895_28	chr6	-	177	1	Intergenic	novelGene_9737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	148882958	148882781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_148882800_148883000
Isoform_160897_194	chr6	-	176	1	ISM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	111417	2017	26925	-2017	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9408	False	NA	NA	False	NA	NA	NA	148891761	148891585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_148891600_148891800
Isoform_160898_33	chr6	-	171	1	Intergenic	novelGene_9738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAATAAAATGCATAG	5388	False	NA	NA	False	NA	NA	NA	148895781	148895610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_148895600_148895800
Isoform_160899_95	chr6	-	165	1	Intergenic	novelGene_9739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAGAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	148927977	148927812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_148927800_148928000
Isoform_16090_5	chr11	-	2048	11	ISM	ENSMUSG00000017210.15	ENSMUST00000125064.8	4577	24	17757	6	-11	-6	3prime_fragment	FALSE	canonical	3	123	junction_5	22.1912144778063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98601903	98595422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598
Isoform_160900_254	chr13	+	168	1	Intergenic	novelGene_3226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAATCTTAAGC	NA	False	NA	NA	False	NA	NA	NA	90349351	90349519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_90349400_90349500
Isoform_160901_8	chr6	+	176	1	Intergenic	novelGene_9740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	148950021	148950197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_148950000_148950200
Isoform_160903_13	chr6	-	181	1	Intergenic	novelGene_9741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTTTGT	7174	False	NA	NA	False	NA	NA	NA	148982161	148981980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_148982000_148982200
Isoform_160905_10	chr6	+	159	1	Intergenic	novelGene_9223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAAGGCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	29790236	29790395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29790200_29790400
Isoform_160907_18	chr6	+	167	1	Intergenic	novelGene_9742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	149012570	149012737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_149012600_149012700
Isoform_160909_4	chr2	-	1000	7	Fusion	ENSMUSG00000078880.11_ENSMUSG00000078881.11_ENSMUSG00000083170.2	novel	1628	5	NA	NA	-8938	439940	multi-exon	TRUE	non_canonical	0	0	junction_1	1.86338998124982	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCTTTGATGCATTCCA	NA	False	NA	NA	False	NA	NA	NA	176556279	175725130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr2_-_175725233_175897532_175897797_176166040_176166079_176315642_176315941_176317097_176317159_176547214_176547342_176556169
Isoform_160910_8	chr6	-	1220	1	Antisense	novelGene_ENSMUSG00000039958.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	149048829	149047609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_149047600_149048800
Isoform_160912_4	chr6	-	174	1	Intergenic	novelGene_9743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	149050037	149049863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_149049900_149050000
Isoform_160919_3	chr6	-	1872	1	Antisense	novelGene_ENSMUSG00000081126.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149264138	149262266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_149262300_149264100
Isoform_160921_92	chr6	+	176	1	Intergenic	novelGene_9744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	149303760	149303936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_149303800_149303900
Isoform_160922_4	chr6	+	3195	1	FSM	ENSMUSG00000003452.16	ENSMUST00000203502.2	10443	1	83	7165	-15	-7165	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGAAAGAAAAAAGAA	135	False	NA	NA	False	NA	NA	NA	149310466	149313661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_149310500_149313700
Isoform_160923_4	chr6	+	3074	1	FSM	ENSMUSG00000003452.16	ENSMUST00000203502.2	10443	1	204	7165	21	-7165	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGAAAGAAAAAAGAA	256	False	NA	NA	False	NA	NA	NA	149310587	149313661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_149310600_149313700
Isoform_160924_10	chr6	+	163	1	Intergenic	novelGene_9745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAATTGAAGCACAG	NA	False	NA	NA	False	NA	NA	NA	149322560	149322723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_149322600_149322700
Isoform_160925_21	chr6	+	204	1	Intergenic	novelGene_9224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGCTTTAAAATAAGGA	7932	False	NA	NA	False	NA	NA	NA	29867625	29867829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29867600_29867800
Isoform_160926_39	chr6	-	186	1	Intergenic	novelGene_9746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTT	NA	False	NA	NA	False	NA	NA	NA	149421502	149421316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_149421300_149421500
Isoform_160927_18	chr6	+	175	1	Intergenic	novelGene_9747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	149454253	149454428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_149454300_149454400
Isoform_160929_4	chr6	+	778	1	NIC	ENSMUSG00000039629.15	novel	5281	21	NA	NA	0	-27764	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACCAAAACCA	-5	True	NA	NA	False	TTTAAA	-23	NA	29917011	29917789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr6_+_29917000_29917800
Isoform_160930_3	chr13	+	178	1	Intergenic	novelGene_2961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATAGCC	NA	False	NA	NA	False	NA	NA	NA	28987450	28987628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_28987400_28987600
Isoform_160931_38	chr6	+	169	1	Intergenic	novelGene_9225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGAAAAGAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	29982618	29982787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29982600_29982800
Isoform_160932_25	chr6	+	175	1	Intergenic	novelGene_9226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAGAAAAGCTGAG	NA	False	NA	NA	False	NA	NA	NA	29982803	29982978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_29982800_29983000
Isoform_160935_80	chr6	+	157	1	Intergenic	novelGene_9227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	30037851	30038008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_30037900_30038000
Isoform_160936_3	chr6	+	184	1	Intergenic	novelGene_9228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAACAACTT	NA	False	NA	NA	False	NA	NA	NA	30038285	30038469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_30038300_30038500
Isoform_160937_1729	chr6	+	177	1	Intergenic	novelGene_9229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1729	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACCCAG	NA	False	NA	NA	False	NA	NA	NA	30038748	30038925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_30038700_30038900
Isoform_160938_22	chr6	+	190	1	Intergenic	novelGene_9230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTGTACAGAACTAATA	NA	False	NA	NA	False	NA	NA	NA	30045008	30045198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_30045000_30045200
Isoform_160939_4	chr6	-	165	1	Intergenic	novelGene_9231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAAGTGTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	30054517	30054352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_30054400_30054500
Isoform_160941_5	chr6	-	182	1	Intergenic	novelGene_9232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTTTCTACCGGGTGT	NA	False	NA	NA	False	NA	NA	NA	30056047	30055865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_30055900_30056000
Isoform_160942_97	chr6	-	173	1	Intergenic	novelGene_9233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATTGGTGCCAC	NA	False	NA	NA	False	NA	NA	NA	30058688	30058515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_30058500_30058700
Isoform_160944_16	chr13	-	177	2	Antisense	novelGene_ENSMUSG00000021699.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAGAAAAAGAATTTGAG	3440	False	NA	NA	False	NA	NA	NA	109834219	109821055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_109821074_109834060
Isoform_160946_3	chr9	-	174	2	Antisense	novelGene_ENSMUSG00000032481.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109983357	109956277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_109956431_109983336
Isoform_160947_26	chr6	+	172	1	Intergenic	novelGene_9234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	30203678	30203850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_30203700_30203800
Isoform_160952_135	chr6	-	201	1	Intergenic	novelGene_9235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30233663	30233462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_30233500_30233700
Isoform_160954_4	chr6	+	182	1	Intergenic	novelGene_9236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATAACCAGCAGCAGCCT	NA	False	NA	NA	False	NA	NA	NA	30290236	30290418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_30290200_30290400
Isoform_160958_3	chr6	+	179	1	Intergenic	novelGene_9237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATTAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	30333795	30333974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_30333800_30334000
Isoform_160959_10	chr6	-	173	1	Intergenic	novelGene_9238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATGACCCACC	NA	False	NA	NA	False	NA	NA	NA	30344061	30343888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_30343900_30344100
Isoform_16096_9	chr11	-	3443	27	FSM	ENSMUSG00000017210.15	ENSMUST00000100500.9	3133	27	-7	-303	1	-6	multi-exon	FALSE	canonical	2	4	junction_20	46.7567196069438	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620243	98595422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608534_98608592_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
Isoform_160960_9	chr6	-	175	1	Intergenic	novelGene_9239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCGGAGCACACCAGGCC	NA	False	NA	NA	False	NA	NA	NA	30427254	30427079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_30427100_30427300
Isoform_160964_165	chr6	-	172	1	Intergenic	novelGene_9240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAACAAAACAA	3503	False	NA	NA	False	NA	NA	NA	30474047	30473875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_30473900_30474000
Isoform_160965_26	chrY	+	180	1	Intergenic	novelGene_12337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	1201392	1201572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_1201400_1201600
Isoform_160966_3	chr6	-	181	1	Intergenic	novelGene_9241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATAGACTTACATGTGG	NA	False	NA	NA	False	NA	NA	NA	30511058	30510877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_30510900_30511100
Isoform_160967_10	chr6	+	175	1	Intergenic	novelGene_9242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAAGTAGTT	NA	False	NA	NA	False	NA	NA	NA	30537391	30537566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_30537400_30537600
Isoform_160970_12	chr9	+	177	1	Intergenic	novelGene_11539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACACATCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	83883532	83883709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_83883500_83883700
Isoform_160979_34	chr6	+	172	1	Intergenic	novelGene_9243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGAGAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	31371449	31371621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_31371400_31371600
Isoform_160980_13	chr6	+	5271	1	FSM	ENSMUSG00000025609.16	ENSMUST00000202577.2	5628	1	-8	365	1	-365	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31375771	31381042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_31375800_31381000
Isoform_160982_6	chr6	+	185	1	Intergenic	novelGene_9244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31607693	31607878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_31607700_31607900
Isoform_160985_4	chr6	+	2268	1	Intergenic	novelGene_9245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32936733	32939001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_32936700_32939000
Isoform_160986_3	chr6	+	4603	1	Intergenic	novelGene_9246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCCC	4815	False	NA	NA	False	NA	NA	NA	32973100	32977703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_32973100_32977700
Isoform_160989_7	chr14	+	177	1	Intergenic	novelGene_3747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124999146	124999323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_124999100_124999300
Isoform_160995_3	chr6	-	193	1	Intergenic	novelGene_9248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAAAACAACACAAAA	NA	False	NA	NA	False	NA	NA	NA	34028984	34028791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_34028800_34029000
Isoform_161_28365	ERCC-00130	+	1049	1	FSM	ERCC-00130A	EF011072	1051	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	28365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	1	1050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00130_+_0_1000
Isoform_1610_6	chr10	-	4840	26	FSM	ENSMUSG00000019790.18	ENSMUST00000141722.8	4702	26	-141	3	-141	-3	multi-exon	FALSE	canonical	2	2	junction_7	7.03408842708137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCAGTGTTTTATCAT	5865	False	NA	-7	True	ATTAAA	-8	NA	9776964	9635704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
Isoform_161002_10	chr6	+	177	1	Intergenic	novelGene_9249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAGAAATC	5999	False	NA	NA	False	NA	NA	NA	34761706	34761883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_34761700_34761900
Isoform_161003_8	chr6	+	2963	1	Intergenic	novelGene_9250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	3941	False	NA	NA	False	NA	NA	NA	34877339	34880302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_34877300_34880300
Isoform_161004_10	chr6	+	184	1	Intergenic	novelGene_9251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAAAGCAGG	NA	False	NA	NA	False	NA	NA	NA	34893109	34893293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_34893100_34893300
Isoform_161005_7	chr6	-	179	1	Intergenic	novelGene_9252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGCAGTACAAATGGCAT	NA	False	NA	NA	False	NA	NA	NA	34917079	34916900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_34916900_34917100
Isoform_161006_3	chr6	+	226	1	Intergenic	novelGene_9253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTGAGCACCACCTG	NA	False	NA	NA	False	AAAAAG	-16	NA	34935492	34935718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_34935500_34935700
Isoform_161007_5	chr6	+	3486	1	Intergenic	novelGene_9254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	35015708	35019194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_35015700_35019200
Isoform_161008_33	chr6	+	2643	1	Intergenic	novelGene_9255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	35016551	35019194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_35016600_35019200
Isoform_161011_66	chr5	-	174	1	Intergenic	novelGene_8649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	96959670	96959496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_96959500_96959700
Isoform_161013_148	chr6	-	172	1	Intergenic	novelGene_9256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAAACAGAAA	NA	False	NA	0	True	NA	NA	NA	35151171	35150999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_35151000_35151200
Isoform_161014_12	chr6	-	177	1	Intergenic	novelGene_9257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	35153916	35153739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_35153700_35153900
Isoform_161016_46	chr6	-	174	1	Intergenic	novelGene_9258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTGA	NA	False	NA	NA	False	NA	NA	NA	35156410	35156236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_35156200_35156400
Isoform_161019_3	chr6	+	297	1	Antisense	novelGene_ENSMUSG00000029843.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATGGGTTGTATTC	2112	False	NA	NA	False	NA	NA	NA	35263499	35263796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_35263500_35263800
Isoform_161020_15	chr6	-	172	1	Intergenic	novelGene_9259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35348247	35348075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_35348100_35348200
Isoform_161036_11	chr6	+	215	1	Intergenic	novelGene_9260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATAGAAAGATTCATA	NA	False	NA	NA	False	NA	NA	NA	36421842	36422057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_36421800_36422100
Isoform_16104_11	chr11	-	3411	26	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	0	-6	combination_of_known_junctions	TRUE	canonical	1	3	junction_25	38.4503003889436	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620200	98595422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620129
Isoform_161044_6	chr6	+	347	1	Intergenic	novelGene_9261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTACAAGCCAGGCGTG	NA	False	NA	NA	False	NA	NA	NA	37233667	37234014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_37233700_37234000
Isoform_161045_3	chr6	+	188	1	Intergenic	novelGene_9262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTTCATAAAGGTTT	NA	False	NA	NA	False	NA	NA	NA	37299912	37300100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_37299900_37300100
Isoform_161048_7	chr6	+	172	1	Intergenic	novelGene_9264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	2741	False	NA	NA	False	NA	NA	NA	37532963	37533135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_37533000_37533100
Isoform_16105_202	chr11	-	3378	26	FSM	ENSMUSG00000017210.15	ENSMUST00000017354.13	3410	26	26	6	1	-6	multi-exon	FALSE	canonical	3	102	junction_19	25.7353919729232	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620235	98595422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
Isoform_161050_3	chr6	+	180	1	Intergenic	novelGene_9265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGGTCATCATTCCTCC	NA	False	NA	NA	False	NA	NA	NA	37553303	37553483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_37553300_37553500
Isoform_161052_21	chr7	+	177	1	Intergenic	novelGene_10369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1245	False	NA	NA	False	NA	NA	NA	127052962	127053139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127053000_127053100
Isoform_161054_25	chr6	+	161	1	Intergenic	novelGene_9266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATACACATTTGTCA	NA	False	NA	NA	False	NA	NA	NA	37662772	37662933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_37662800_37662900
Isoform_161055_6	chr6	+	196	1	Intergenic	novelGene_9267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAGTTAATTTTATCGA	NA	False	NA	NA	False	NA	NA	NA	37680370	37680566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_37680400_37680600
Isoform_161058_38	chr6	-	173	1	Intergenic	novelGene_9179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	5556627	5556454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_5556500_5556600
Isoform_161060_866	chr6	+	1117	1	FSM	ENSMUSG00000080242.6	ENSMUST00000122373.2	465	1	-110	-542	-110	542	mono-exon	FALSE	NA	NA	NA	NA	NA	866	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	37782910	37784027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_37782900_37784000
Isoform_161069_13	chr6	+	178	1	Intergenic	novelGene_9268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	37821719	37821897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_37821700_37821900
Isoform_16107_3	chr11	-	3051	23	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	120	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_22	41.2849651460121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTGTGGGGACAGTT	NA	False	NA	-2	True	AATAAA	-23	NA	98609516	98595416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609486
Isoform_161070_65	chr6	+	176	1	Intergenic	novelGene_9269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37826092	37826268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_37826100_37826300
Isoform_161073_3	chr6	-	159	1	Intergenic	novelGene_9270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	37973750	37973591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_37973600_37973800
Isoform_161074_6	chr6	-	180	1	Intergenic	novelGene_9271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCTATTGATTA	3292	False	NA	NA	False	NA	NA	NA	38019994	38019814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38019800_38020000
Isoform_161075_1322	chr6	+	177	1	Intergenic	novelGene_9272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1322	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	38034695	38034872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38034700_38034900
Isoform_161081_8	chr6	-	218	1	Intergenic	novelGene_9273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATTTGAAATCCAAATT	8693	False	NA	NA	False	AAGAAA	-19	NA	38245607	38245389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38245400_38245600
Isoform_16109_3	chr11	-	3481	25	NIC	ENSMUSG00000017210.15	novel	3133	27	NA	NA	0	-6	intron_retention	FALSE	canonical	3	102	junction_18	24.6424078346433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620236	98595422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
Isoform_161090_7	chr6	+	164	1	Intergenic	novelGene_9274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAAAGATAAGAATTGCC	NA	False	NA	NA	False	NA	NA	NA	38273897	38274061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38273900_38274100
Isoform_161091_41	chr6	-	924	1	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	48063	1	48063	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTCTGTTTATGGTTC	NA	False	NA	-1	True	AATAAA	-31	NA	38283145	38282221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_-_38282200_38283100
Isoform_161095_11	chr6	+	176	1	Intergenic	novelGene_9275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGTCATGCA	6797	False	NA	NA	False	NA	NA	NA	38291268	38291444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38291300_38291400
Isoform_161097_3	chr13	+	176	1	Intergenic	novelGene_3130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62944829	62945005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62944800_62945000
Isoform_161098_12	chr6	-	159	1	Intergenic	novelGene_9276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATTAAAAAAAAAATA	4775	False	NA	NA	False	NA	NA	NA	38314976	38314817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38314800_38315000
Isoform_161099_5	chr6	-	177	1	Intergenic	novelGene_9277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	38325725	38325548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38325500_38325700
Isoform_1611_4	chr10	-	7052	26	FSM	ENSMUSG00000019790.18	ENSMUST00000141722.8	4702	26	-141	-2209	-141	-2202	multi-exon	FALSE	canonical	2	2	junction_7	7.03408842708137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGCACTTTCTTAGG	5865	False	NA	NA	False	AATAAA	-24	NA	9776964	9633492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
Isoform_16110_68	chr11	-	2665	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	56	0	56	0	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTCTGTGATGTGTG	NA	False	NA	0	True	NA	NA	NA	98666103	98658757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
Isoform_161100_34	chr6	+	356	1	Intergenic	novelGene_9278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTGTAAGTAAATC	NA	False	NA	NA	False	NA	NA	NA	38336212	38336568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38336200_38336600
Isoform_161101_20	chr6	+	178	1	Intergenic	novelGene_9279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	38339743	38339921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38339700_38339900
Isoform_161104_11	chr5	+	189	1	Intergenic	novelGene_8712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAATTGTCCAATTATGT	NA	False	NA	NA	False	NA	NA	NA	107166136	107166325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_107166100_107166300
Isoform_161107_10	chr6	+	496	1	FSM	ENSMUSG00000057696.5	ENSMUST00000119767.2	348	1	-70	-78	-70	78	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTAACATTCTCCC	1144	False	NA	NA	False	NA	NA	NA	38353671	38354167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_38353700_38354200
Isoform_161110_20	chr6	-	156	1	Intergenic	novelGene_9281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	38359932	38359776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38359800_38359900
Isoform_161112_6	chr6	+	179	1	Intergenic	novelGene_9282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGAGAGGGCTGT	3517	False	NA	NA	False	NA	NA	NA	38372886	38373065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38372900_38373100
Isoform_161115_13	chr6	+	180	1	Intergenic	novelGene_9283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTGAAAAGAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	38427788	38427968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38427800_38428000
Isoform_161116_14	chr6	-	177	1	Intergenic	novelGene_9284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATCAATAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	38443094	38442917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38442900_38443100
Isoform_161117_6	chr6	+	170	1	Intergenic	novelGene_9285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	38453784	38453954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38453800_38454000
Isoform_161119_3	chr6	-	1064	1	Antisense	novelGene_ENSMUSG00000038538.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38479825	38478761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_38478800_38479800
Isoform_161120_3	chr6	+	1555	1	ISM	ENSMUSG00000038538.18	ENSMUST00000160583.8	14644	17	76497	762	19443	-762	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAATAAATAAATA	NA	False	NA	NA	False	AATATA	-31	NA	38487381	38488936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr6_+_38487400_38488900
Isoform_161121_36	chr6	-	337	1	Intergenic	novelGene_9286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38505392	38505055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38505100_38505400
Isoform_161124_31	chr6	-	181	1	Intergenic	novelGene_9287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38519557	38519376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38519400_38519600
Isoform_161125_4	chr6	-	179	1	Intergenic	novelGene_9288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACATTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	38521030	38520851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38520900_38521000
Isoform_161128_34	chr6	+	186	1	Intergenic	novelGene_9289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGACAATTCTGACATT	9634	False	NA	NA	False	NA	NA	NA	38523576	38523762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38523600_38523800
Isoform_161129_71	chr6	-	177	1	Intergenic	novelGene_9290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAAACAAAAC	9537	False	NA	NA	False	NA	NA	NA	38524117	38523940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38523900_38524100
Isoform_161130_4	chr6	-	580	1	Intergenic	novelGene_9291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAAAAAAACTGGCG	5481	False	NA	NA	False	NA	NA	NA	38528173	38527593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38527600_38528200
Isoform_161132_6	chr6	-	3992	1	Intergenic	novelGene_9292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38541152	38537160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38537200_38541200
Isoform_161135_3	chr6	-	745	1	Intergenic	novelGene_9293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAATCCCCCTAAT	6816	False	NA	NA	False	NA	NA	NA	38545193	38544448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38544400_38545200
Isoform_161136_89	chr2	-	174	1	Intergenic	novelGene_6473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110663676	110663502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_110663500_110663700
Isoform_161143_15	chr6	+	178	1	Intergenic	novelGene_9295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGCTCATGAGTTAAT	9885	False	NA	NA	False	NA	NA	NA	38621001	38621179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_38621000_38621200
Isoform_161147_9	chr6	-	171	1	Intergenic	novelGene_9296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGCCAGAGCGAGCGG	9958	False	NA	NA	False	NA	NA	NA	38685497	38685326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38685300_38685500
Isoform_161148_8	chr6	-	170	1	Intergenic	novelGene_9297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAACAACCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	38864066	38863896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38863900_38864100
Isoform_161149_14	chr6	-	174	1	Intergenic	novelGene_9298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAACT	1260	False	NA	NA	False	NA	NA	NA	39066325	39066151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39066200_39066300
Isoform_16115_4	chr11	-	2605	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	-44	160	-44	-160	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCTGGCCCCCTGAG	NA	False	NA	-2	True	TATAAA	-12	NA	98666203	98658917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
Isoform_161150_45	chr6	-	178	1	Intergenic	novelGene_9299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTGGCT	2596	False	NA	NA	False	NA	NA	NA	39086417	39086239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39086200_39086400
Isoform_161152_27	chr15	+	176	1	Intergenic	novelGene_4201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99804607	99804783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99804600_99804800
Isoform_161155_6	chr6	+	379	1	Intergenic	novelGene_9301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	39296651	39297030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39296700_39297000
Isoform_161157_3	chr6	+	180	1	Intergenic	novelGene_9302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39342760	39342940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39342800_39342900
Isoform_161159_547	chr6	+	177	1	Intergenic	novelGene_9303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	547	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	39345663	39345840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39345700_39345800
Isoform_161160_30	chr6	+	288	1	Intergenic	novelGene_9304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATTTGCATGTTTATTGT	NA	False	NA	34	True	NA	NA	NA	39351952	39352240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39352000_39352200
Isoform_161162_9	chr6	+	3561	1	Intergenic	novelGene_9180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCCAAAA	NA	False	NA	NA	False	NA	NA	NA	6079337	6082898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_6079300_6082900
Isoform_161163_11	chr6	+	348	1	Intergenic	novelGene_9305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39368763	39369111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39368800_39369100
Isoform_161173_84	chr6	-	173	1	Intergenic	novelGene_9306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGT	NA	False	NA	NA	False	NA	NA	NA	39384922	39384749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39384700_39384900
Isoform_161177_9	chr6	+	281	1	Intergenic	novelGene_9307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	39414817	39415098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39414800_39415100
Isoform_161179_61	chr6	-	230	1	Intergenic	novelGene_9308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTATTGTGAATTATA	NA	False	NA	NA	False	NA	NA	NA	39430291	39430061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39430100_39430300
Isoform_16118_186	chr11	-	5127	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	459	junction_1	289.08507892512	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915016	98883772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
Isoform_161184_3	chr2	-	163	1	Antisense	novelGene_ENSMUSG00000027642.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	9934	False	NA	NA	False	NA	NA	NA	157124038	157123875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_157123900_157124000
Isoform_161185_4	chr6	+	159	1	Intergenic	novelGene_9310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTCTCATTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	39490026	39490185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39490000_39490200
Isoform_161186_6	chr6	-	176	1	Intergenic	novelGene_9311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCCTCTGCA	NA	False	NA	NA	False	NA	NA	NA	39493348	39493172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39493200_39493300
Isoform_161187_117	chr6	-	178	1	Intergenic	novelGene_9312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	39514859	39514681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39514700_39514900
Isoform_161189_3	chr6	+	164	1	Intergenic	novelGene_9313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAATCTAAAAAAA	356	False	NA	NA	False	NA	NA	NA	39527898	39528062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39527900_39528100
Isoform_161190_4	chr6	+	341	1	Intergenic	novelGene_9314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGGGAAGAGTGTGAC	7963	False	NA	NA	False	AAGAAA	-11	NA	39535505	39535846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39535500_39535800
Isoform_161191_5	chr6	-	175	1	Intergenic	novelGene_9315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	39537638	39537463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39537500_39537600
Isoform_161193_21	chr6	-	219	1	Intergenic	novelGene_9316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTCTCCCTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	39562056	39561837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39561800_39562100
Isoform_161194_9	chr6	-	178	1	Intergenic	novelGene_9317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTATC	NA	False	NA	NA	False	NA	NA	NA	39570975	39570797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39570800_39571000
Isoform_161195_38	chr6	+	3723	1	Antisense	novelGene_ENSMUSG00000002413.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6964	False	NA	NA	False	NA	NA	NA	39580881	39584604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_+_39580900_39584600
Isoform_161196_79	chr9	-	175	1	Intergenic	novelGene_11687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8630	False	NA	NA	False	NA	NA	NA	109840817	109840642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_109840600_109840800
Isoform_161197_3	chr6	+	4396	1	Intergenic	novelGene_9319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39692380	39696776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39692400_39696800
Isoform_161198_7	chr6	+	178	1	Intergenic	novelGene_9320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGCATCCA	NA	False	NA	NA	False	NA	NA	NA	39733723	39733901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39733700_39733900
Isoform_161199_8	chr6	-	184	1	Intergenic	novelGene_9321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTGCCTTTAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	39742488	39742304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39742300_39742500
Isoform_161200_3	chr6	+	216	1	Intergenic	novelGene_9322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCATGCTGGGATTGC	NA	False	NA	NA	False	NA	NA	NA	39750755	39750971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39750800_39751000
Isoform_161201_4	chr6	+	176	1	Intergenic	novelGene_9323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGCTCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	39760312	39760488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39760300_39760500
Isoform_161202_96	chr6	-	176	1	Intergenic	novelGene_9324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATGGCAACAACAAA	NA	False	NA	1	True	NA	NA	NA	39764387	39764211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39764200_39764400
Isoform_161203_20	chr6	-	178	1	Intergenic	novelGene_9325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	39784759	39784581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39784600_39784800
Isoform_161204_21	chr6	-	173	1	Intergenic	novelGene_9326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAGCATTAAATAT	NA	False	NA	NA	False	NA	NA	NA	39818835	39818662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39818700_39818800
Isoform_161205_26	chr6	-	180	1	Intergenic	novelGene_9327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTG	NA	False	NA	NA	False	NA	NA	NA	39819616	39819436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_39819400_39819600
Isoform_161209_17	chr6	-	3615	1	Intergenic	novelGene_9328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACACAGAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-41	NA	40350638	40347023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_40347000_40350600
Isoform_161215_3	chr6	-	174	1	Intergenic	novelGene_9329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAACTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40475437	40475263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_40475300_40475400
Isoform_161216_51	chr7	-	207	1	Intergenic	novelGene_10167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATAAGATTGATAGGCC	NA	False	NA	NA	False	NA	NA	NA	81502367	81502160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_81502200_81502400
Isoform_161217_89	chr6	+	178	1	Intergenic	novelGene_9181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	6537873	6538051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_6537900_6538100
Isoform_161218_4	chr6	+	177	1	Intergenic	novelGene_9330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAATGTTTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	41089361	41089538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_41089400_41089500
Isoform_161237_142	chr7	-	3346	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9604	False	NA	85	True	NA	NA	NA	3218931	3204499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
Isoform_161238_9	chr7	-	3484	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-40	-2	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9466	False	NA	85	True	NA	NA	NA	3219069	3204499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
Isoform_161240_172	chr7	-	3319	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	128	2	30	-2	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9634	False	NA	85	True	NA	NA	NA	3218901	3204499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
Isoform_161241_89	chr7	-	3349	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	98	2	0	-2	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9604	False	NA	85	True	NA	NA	NA	3218931	3204499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
Isoform_161245_11	chr7	-	3183	11	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	75.555343953952	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATATGACTTTATTTT	9604	False	NA	81	True	NA	NA	NA	3218931	3204503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3213722_3214125_3218840
Isoform_161246_8	chr7	-	3235	11	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-45	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	78.1811358321175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9559	False	NA	85	True	NA	NA	NA	3218976	3204499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3213722_3214128_3218840
Isoform_161248_3	chr7	-	1130	6	NIC	ENSMUSG00000006335.17	novel	1166	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	98.6659008979293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632888	3623322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631822_3632086_3632550
Isoform_161250_69	chr7	-	1119	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	47	0	2	0	multi-exon	FALSE	canonical	3	150	junction_1	47.3142684610044	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632881	3623322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
Isoform_161253_3	chr7	-	1048	5	NIC	ENSMUSG00000006335.17	novel	1166	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	107.527903355362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632881	3623322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3623474_3623745_3623983_3624061_3624132_3631826_3632086_3632550
Isoform_161254_48	chr7	-	1089	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	2	0	2	0	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632881	3623322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
Isoform_161259_76	chr7	-	1851	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	372	-1	372	1	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGCACCATCAATACTT	9075	False	NA	-18	True	NA	NA	NA	3668467	3663095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
Isoform_161260_3	chr7	-	606	4	ISM	ENSMUSG00000019734.17_ENSMUSG00000078813.4	ENSMUST00000136678.3	1529	6	3279	-164	-320	-3	3prime_fragment	FALSE	canonical	3	25	junction_3	7.48331477354788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTTTGCGTTTTGAAAC	7340	False	NA	-16	True	AATAAA	-12	NA	3670202	3668792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046
Isoform_161261_20	chr7	-	2299	15	FSM	ENSMUSG00000019734.17	ENSMUST00000038743.15	2310	15	10	1	10	0	multi-exon	FALSE	canonical	3	9	junction_12	9.74077271376478	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCGTTTTGAAACCCC	5408	False	NA	-13	True	AATAAA	-15	NA	3680542	3668789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3673041_3673936_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3680422
Isoform_161262_4	chr7	-	3172	14	NIC	ENSMUSG00000019734.17	novel	2310	15	NA	NA	3	-1	intron_retention	FALSE	canonical	3	9	junction_11	9.97037030524286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTGCGTTTTGAAACCC	5430	False	NA	-14	True	AATAAA	-14	NA	3680520	3668790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3680422
Isoform_161265_240	chr7	-	2312	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	566	0	-5	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7959	False	NA	-2	True	AATAAA	-15	NA	3695956	3680787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
Isoform_161268_38	chr7	-	2902	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	-24	0	-24	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7369	False	NA	-2	True	AATAAA	-15	NA	3696546	3680787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
Isoform_161274_45	chr7	-	3995	7	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	178	junction_3	25.2762514801718	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7964	False	NA	-2	True	AATAAA	-15	NA	3695951	3680787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3681849_3686807_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
Isoform_161277_28	chr7	-	687	2	FSM	ENSMUSG00000063838.7	ENSMUST00000140410.2	362	2	188	-513	188	-3	multi-exon	FALSE	canonical	3	148	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	NA	False	NA	-2	True	CATAAA	-19	NA	4167253	4154261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4154787_4167091
Isoform_161278_80	chr7	-	867	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	155	3	155	-3	multi-exon	FALSE	canonical	3	137	junction_2	5.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	NA	False	NA	-2	True	CATAAA	-19	NA	4167704	4154261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4154787_4167091_4167187_4167457
Isoform_16128_427	chr11	-	5128	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	3	459	junction_1	255.273980064477	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98915016	98883774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
Isoform_161280_10	chr7	-	949	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	73	3	73	-3	multi-exon	FALSE	canonical	3	137	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	NA	False	NA	-2	True	CATAAA	-19	NA	4167786	4154261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4154787_4167091_4167187_4167457
Isoform_161281_3	chr7	-	2313	3	FSM	ENSMUSG00000043432.8_ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	155	-1443	155	1443	multi-exon	FALSE	canonical	3	137	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAGCTCCAGAGCCCG	NA	False	NA	NA	False	AATAAA	-11	NA	4167704	4152815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4154787_4167091_4167187_4167457
Isoform_161283_5	chr7	-	3065	8	NIC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	9.2493794607078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGTCATTGTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	4448645	4428666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4446735_4446771_4447201_4447321_4448445
Isoform_161284_3	chr7	-	3065	7	NIC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	10.6874796945876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTCATTGTCCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	4448210	4428665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4447976
Isoform_161287_54	chr7	-	3031	7	FSM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	3	0	3	0	multi-exon	FALSE	canonical	3	20	junction_3	6.10100173924104	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTCATTGTCCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	4448645	4428665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448445
Isoform_161289_14	chr7	-	2930	6	ISM	ENSMUSG00000008435.16	ENSMUST00000119485.8	2119	7	-48	896	0	1	5prime_fragment	FALSE	canonical	2	7	junction_3	10.0279609093773	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTCATTGTCCTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	4448648	4428664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_4430802_4433392_4433495_4434420_4434634_4445592_4445749_4447201_4447321_4448445
Isoform_161296_421	chr7	-	2985	22	FSM	ENSMUSG00000019254.17	ENSMUST00000013886.9	2983	22	-2	0	-2	0	multi-exon	FALSE	canonical	3	198	junction_16	25.6093980765123	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9939	False	NA	-3	True	AATAAA	-17	NA	4504681	4484518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_161297_38	chr7	-	3009	22	FSM	ENSMUSG00000019254.17	ENSMUST00000013886.9	2983	22	-26	0	-26	0	multi-exon	FALSE	canonical	3	198	junction_16	25.6093980765123	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9915	False	NA	-3	True	AATAAA	-17	NA	4504705	4484518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_1613_3	chr10	-	2066	9	ISM	ENSMUSG00000019790.18	ENSMUST00000125200.8	3300	25	-551	63862	-155	-9059	5prime_fragment	FALSE	canonical	3	16	junction_7	5.01092556320686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGCTTCATTTTAA	5851	False	NA	NA	False	AATAAA	-20	NA	9776978	9700518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
Isoform_161301_14	chr7	-	3881	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-3	0	intron_retention	FALSE	canonical	3	232	junction_7	20.8868379607829	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9938	False	NA	-3	True	AATAAA	-17	NA	4504682	4484518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_161305_62	chr7	-	2988	22	FSM	ENSMUSG00000019254.17	ENSMUST00000124248.8	2667	22	-321	0	-2	0	multi-exon	FALSE	canonical	3	46	junction_7	53.3921869151542	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9939	False	NA	-3	True	AATAAA	-17	NA	4504681	4484518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_161308_9	chr7	-	3013	22	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	60.8223687817047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9931	False	NA	-3	True	AATAAA	-17	NA	4504689	4484518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4485158_4485235_4485287_4485377_4485449_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_161310_8	chr7	-	986	4	FSM	ENSMUSG00000019254.17	ENSMUST00000145689.7	1370	4	-18	402	-2	237	multi-exon	FALSE	canonical	3	253	junction_2	4.92160768674447	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTAAGGCGGATCAAT	9939	False	NA	NA	False	NA	NA	NA	4504681	4492572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_161312_5	chr7	-	677	4	FSM	ENSMUSG00000064179.14	ENSMUST00000086502.5	485	4	-69	-123	-69	0	multi-exon	FALSE	canonical	3	16	junction_3	18.0800688297608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTCTTCAGGGTTGTT	7261	False	NA	-11	True	AATAAA	-19	NA	4511093	4507661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4510686
Isoform_161313_4	chr7	-	863	6	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	4445	-95	15	3	3prime_fragment	TRUE	canonical	3	28	junction_3	11.499565209172	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTCAGGGTTGTTATT	9900	False	NA	-8	True	AATAAA	-22	NA	4512922	4507658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556
Isoform_161315_11	chr7	-	682	7	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	4310	-95	-120	3	3prime_fragment	FALSE	canonical	3	24	junction_6	12.1849178176228	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTCAGGGTTGTTATT	9765	False	NA	-8	True	AATAAA	-22	NA	4513057	4507658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950
Isoform_161316_3	chr7	-	903	13	FSM	ENSMUSG00000064179.14	ENSMUST00000163710.8	885	13	-15	-3	1	3	multi-exon	FALSE	canonical	0	0	junction_8	20.3570558338435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTCAGGGTTGTTATT	9182	False	NA	-8	True	AATAAA	-22	NA	4518973	4507658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516809_4516837_4517211_4517226_4517335_4517379_4518929
Isoform_161317_6	chr7	-	815	8	FSM	ENSMUSG00000035458.16	ENSMUST00000098859.10	912	8	94	3	-7	0	multi-exon	FALSE	canonical	3	16	junction_6	4.77664385637157	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAACTGTGTGTCTGCT	7011	False	NA	-5	True	AATAAA	-14	NA	4525433	4521306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525068_4525082_4525303
Isoform_161318_8	chr7	-	2202	12	FSM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	1	21	1	-21	multi-exon	FALSE	canonical	2	8	junction_9	6.85022772137618	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTGTCCTGTCCTC	NA	False	NA	-20	True	AATAAA	-14	NA	4535451	4525952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535185_4535275_4535376
Isoform_161319_4	chr7	-	751	3	ISM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	-10	8372	-10	-8372	5prime_fragment	FALSE	canonical	3	9	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	4535462	4534303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_4534880_4535185_4535275_4535376
Isoform_161322_14	chr7	-	2217	17	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-1208	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	78.3768689968539	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4644370	4634493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263
Isoform_161326_6	chr7	-	2747	22	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.4532781287924	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	9933	False	NA	-3	True	AATAAA	-17	NA	4646175	4634493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147
Isoform_161331_421	chr7	-	3797	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2624936763093	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4661987	4634493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_4634896_4634929_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
Isoform_161333_11	chr7	-	4470	25	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	-14	657	multi-exon	TRUE	non_canonical	0	0	junction_1	67.2624936763093	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4662003	4633836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_4634896_4634929_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
Isoform_161346_24	chr7	-	1558	7	ISM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	365	-6	-42	6	3prime_fragment	FALSE	canonical	3	470	junction_6	31.2663290671184	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687702	4663513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270
Isoform_161350_168	chr7	-	1373	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	52	6	combination_of_known_junctions	FALSE	canonical	3	78	junction_7	161.654708864169	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687928	4663513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687482_4687892
Isoform_161353_454	chr7	-	1507	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	210	junction_7	116.504882966775	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687978	4663513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
Isoform_161354_17	chr7	-	1599	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-3	6	combination_of_known_junctions	FALSE	canonical	3	210	junction_7	116.504882966775	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4688070	4663513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
Isoform_161356_117	chr7	-	1511	8	FSM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	85	-3	-2	3	multi-exon	FALSE	canonical	3	115	junction_7	148.934720667842	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTCTTGCATTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	4687982	4663516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
Isoform_161357_182	chr7	-	1454	8	FSM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	145	-6	58	6	multi-exon	FALSE	canonical	3	115	junction_7	148.934720667842	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687922	4663513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
Isoform_161360_21	chr7	-	1146	2	FSM	ENSMUSG00000051811.15	ENSMUST00000182272.2	519	2	-495	-132	0	-1	multi-exon	FALSE	canonical	3	648	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4754975_4755059
Isoform_161361_16	chr7	-	584	3	FSM	ENSMUSG00000051811.15	ENSMUST00000182111.8	585	3	0	1	0	-1	multi-exon	FALSE	canonical	3	648	junction_1	77.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4754975_4755059_4755161_4755722
Isoform_161362_272	chr7	-	481	4	FSM	ENSMUSG00000051811.15	ENSMUST00000063324.14	553	4	71	1	0	-1	multi-exon	FALSE	canonical	3	648	junction_1	73.0677007226099	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4754975_4755059_4755161_4755722_4755849_4755951
Isoform_161364_14	chr7	-	515	4	FSM	ENSMUSG00000051811.15	ENSMUST00000182048.2	465	4	12	-62	-3	-1	multi-exon	FALSE	canonical	3	33	junction_3	332.524017511852	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756025	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4754975_4755059_4755161_4755722_4755880_4755951
Isoform_161366_9	chr7	-	492	4	FSM	ENSMUSG00000051811.15	ENSMUST00000183334.8	490	4	0	-2	0	-1	multi-exon	FALSE	canonical	3	20	junction_2	338.542299999408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4754975_4755059_4755172_4755722_4755849_4755951
Isoform_161368_8	chr7	-	1044	3	NIC	ENSMUSG00000051811.15	novel	490	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	648	junction_1	77.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATTTGTTTCTTTTCTC	NA	False	NA	-12	True	AATAAA	-14	NA	4756025	4754793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4754975_4755059_4755849_4755951
Isoform_161369_8	chr7	-	453	4	FSM	ENSMUSG00000051811.15	ENSMUST00000183971.8	401	4	-54	2	-3	0	multi-exon	FALSE	canonical	3	74	junction_1	343.653895656662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756025	4754792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4754975_4755089_4755161_4755722_4755849_4755951
Isoform_161371_12	chr7	-	438	4	FSM	ENSMUSG00000051811.15	ENSMUST00000182738.8	423	4	-14	-1	0	-1	multi-exon	FALSE	canonical	3	34	junction_1	362.510076488303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4754975_4755102_4755161_4755722_4755849_4755951
Isoform_161372_7	chr7	-	1102	2	ISM	ENSMUSG00000051811.15	ENSMUST00000184143.8	435	4	-3	1	-3	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756025	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_4754975_4755106
Isoform_161373_38	chr7	-	434	4	FSM	ENSMUSG00000051811.15	ENSMUST00000184143.8	435	4	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	378.537830195198	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4754975_4755106_4755161_4755722_4755849_4755951
Isoform_161374_7	chr7	-	995	3	NIC	ENSMUSG00000051811.15	novel	435	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	401.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756022	4754792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4754975_4755106_4755849_4755951
Isoform_161375_12	chr7	-	566	3	FSM	ENSMUSG00000051811.15	ENSMUST00000182173.2	391	3	-21	-154	0	-1	multi-exon	FALSE	canonical	3	803	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4755161_4755722_4755849_4755951
Isoform_161378_43	chr7	-	687	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	72	616	72	-1	multi-exon	FALSE	canonical	3	322	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGCTTGCCTGTCTGG	234	False	NA	-7	True	GATAAA	-15	NA	4792583	4788171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4788279_4792003
Isoform_161379_141	chr7	-	666	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	94	615	94	0	multi-exon	FALSE	canonical	3	322	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGCTTGCCTGTCTGGT	256	False	NA	-6	True	GATAAA	-16	NA	4792561	4788170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4788279_4792003
Isoform_161386_11704	chr7	-	994	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	238	6	-1	-6	multi-exon	FALSE	canonical	3	9878	junction_1	292.246851518066	11704	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGTTTCTATGCCTGA	NA	False	NA	-31	True	AATAAA	-9	NA	4815351	4811018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
Isoform_161402_431	chr7	-	2526	4	NNC	ENSMUSG00000061374.15	novel	2306	3	NA	NA	-49	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.586220720504	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGTCTTGTTTTTTGA	4223	False	NA	-5	True	AATAAA	-13	NA	5016286	5010058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_5010959_5011002_5012205_5015676_5016022_5016207
Isoform_161405_21	chr7	-	2674	3	FSM	ENSMUSG00000061374.15	ENSMUST00000167804.9	2637	3	-37	0	-21	0	multi-exon	FALSE	canonical	1	2	junction_2	221	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	3220	False	NA	-4	True	AATAAA	-14	NA	5017289	5010057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_5012205_5015676_5016022_5017107
Isoform_161406_90	chr7	-	2609	3	FSM	ENSMUSG00000061374.15	ENSMUST00000165320.3	2653	3	44	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	217.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	2857	False	NA	-4	True	AATAAA	-14	NA	5017652	5010057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_5012205_5015676_5016022_5017535
Isoform_161408_61	chr7	-	2553	4	NNC	ENSMUSG00000061374.15	novel	2546	3	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.145241191992	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	2781	False	NA	-4	True	AATAAA	-14	NA	5017728	5010057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_5010959_5011002_5012205_5015676_5016022_5017623
Isoform_161409_904	chr7	-	2521	3	FSM	ENSMUSG00000061374.15	ENSMUST00000077385.15	2546	3	25	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	130	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	2857	False	NA	-4	True	AATAAA	-14	NA	5017652	5010057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_5012205_5015676_5016022_5017623
Isoform_161414_3	chr7	-	1865	2	FSM	ENSMUSG00000043290.7	ENSMUST00000062428.5	2153	2	6	282	6	-282	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTTGTATTCCAATTC	NA	False	NA	NA	False	ATTAAA	-24	NA	5041439	5037719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_5039479_5041333
Isoform_161415_55	chr7	-	1892	3	FSM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	6	-1	6	1	multi-exon	FALSE	canonical	3	46	junction_1	59	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTGTTTCTTGAG	9632	False	NA	0	True	AATAAA	-21	NA	6158964	6134488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6136171_6146060_6146150_6158843
Isoform_161417_4	chr7	-	2121	3	FSM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	-225	1	-199	-1	multi-exon	FALSE	canonical	3	46	junction_1	59	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCACTGCCTGTTTCTTG	9401	False	NA	-2	True	AATAAA	-19	NA	6159195	6134490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6136171_6146060_6146150_6158843
Isoform_161419_9	chr7	-	1964	4	NNC	ENSMUSG00000046792.9	novel	1897	3	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	74.9933330370107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCACTGCCTGTTTCTTG	9625	False	NA	-2	True	AATAAA	-19	NA	6158971	6134490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_6136171_6137640_6137708_6146060_6146150_6158843
Isoform_161422_5	chr7	-	430	3	FSM	ENSMUSG00000046792.9	ENSMUST00000207628.2	576	3	32	114	6	2	multi-exon	FALSE	canonical	3	90	junction_1	37	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCAGTGTTCCTTAGA	9632	False	NA	NA	False	AATAAA	-18	NA	6158964	6145398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6145619_6146060_6146150_6158843
Isoform_161423_6	chr7	-	977	2	FSM	ENSMUSG00000046792.9	ENSMUST00000207957.2	880	2	-28	-69	17	2	multi-exon	FALSE	canonical	3	164	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCGAAGTTCATGCCG	9643	False	NA	-8	True	AATAAA	-18	NA	6158953	6145282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6146150_6158843
Isoform_161424_3	chr7	-	902	2	FSM	ENSMUSG00000046792.9	ENSMUST00000207957.2	880	2	-70	48	1	1	multi-exon	FALSE	canonical	3	164	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTCAGTGTTCCTTAG	9601	False	NA	NA	False	AATAAA	-17	NA	6158995	6145399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6146150_6158843
Isoform_161425_12	chr7	-	2538	5	FSM	ENSMUSG00000030443.17	ENSMUST00000062765.14	2550	5	7	5	0	-5	multi-exon	FALSE	canonical	3	15	junction_1	5.61248608016091	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAGTTGATTATTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	6334277	6318663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6320779_6326645_6326742_6328451_6328579_6332253_6332316_6334139
Isoform_161430_67	chr7	-	8688	9	FSM	ENSMUSG00000002265.18	ENSMUST00000051209.11	8694	9	1	5	-1	-5	multi-exon	FALSE	canonical	3	81	junction_3	8.98262211161084	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTCTCAGTCTCTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	6733419	6706895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6733256
Isoform_161431_17	chr7	-	8736	9	FSM	ENSMUSG00000002265.18	ENSMUST00000051209.11	8694	9	-45	3	-35	-3	multi-exon	FALSE	canonical	3	81	junction_3	8.98262211161084	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTCAGTCTCTTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	6733465	6706893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6733256
Isoform_161432_4	chr7	-	3217	5	NIC	ENSMUSG00000108043.3	novel	3226	7	NA	NA	-5	2350	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	4.15331193145904	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAACAAAAACTT	NA	False	NA	NA	False	AGTAAA	-9	NA	6980424	6963983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_6966692_6968979_6969038_6976160_6976339_6978232_6978301_6980219
Isoform_161433_127	chr7	-	2012	5	FSM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	29	1	-14	-1	multi-exon	FALSE	canonical	3	51	junction_3	2.54950975679639	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAATGACTCTTGAGG	6265	False	NA	-6	True	AATAAA	-20	NA	7124458	7117689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221
Isoform_161434_54	chr7	-	2045	5	FSM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	-4	1	-4	-1	multi-exon	FALSE	canonical	3	51	junction_3	2.54950975679639	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAATGACTCTTGAGG	6232	False	NA	-6	True	AATAAA	-20	NA	7124491	7117689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221
Isoform_161435_4	chr7	-	2821	6	Fusion	ENSMUSG00000063535.8_ENSMUSG00000062116.11	novel	2042	5	NA	NA	6005	-1	multi-exon	FALSE	canonical	3	3	junction_5	20.5270553173123	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAATGACTCTTGAGG	3027	False	NA	-6	True	AATAAA	-20	NA	7133718	7117689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221_7125093_7133543
Isoform_161436_41	chr7	-	3018	4	FSM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	11	-1	11	1	multi-exon	TRUE	canonical	3	13	junction_1	4.32049379893857	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTTGCGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	7139743	7133672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_7136168_7137165_7137250_7138290_7138418_7139431
Isoform_161438_85	chr7	-	2759	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	21	-3	21	3	multi-exon	FALSE	canonical	3	42	junction_2	7.29725975966321	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGACTATTGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	7212976	7205112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
Isoform_161440_4	chr7	-	2844	6	NNC	ENSMUSG00000066838.8	novel	2777	5	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.1119016958796	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTCATGACTATTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	7212976	7205117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7210638_7210729_7212716
Isoform_161444_4	chr7	-	4015	12	NIC	ENSMUSG00000000605.10	novel	2445	13	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	11.8732980511554	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7301784	7285307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294726_7294818_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
Isoform_161446_22	chr7	-	4247	12	ISM	ENSMUSG00000000605.10	ENSMUST00000000619.8	4607	13	764	0	0	0	3prime_fragment	FALSE	canonical	2	21	junction_11	8.98943365042381	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7301768	7285307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
Isoform_161448_10	chr7	-	4099	11	ISM	ENSMUSG00000000605.10	ENSMUST00000210594.2	2539	12	486	-1793	-5	0	3prime_fragment	FALSE	canonical	3	23	junction_10	8.12465383877984	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7301775	7285307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
Isoform_161451_8	chr7	-	2542	5	FSM	ENSMUSG00000092574.5	ENSMUST00000210322.2	1179	5	11	-1374	11	1374	multi-exon	FALSE	canonical	3	23	junction_4	6.74536878161602	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTCACTTGTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	8096029	8087950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_8089971_8091140_8091228_8091987_8092114_8093259_8093299_8095759
Isoform_161452_8	chr7	-	2425	5	FSM	ENSMUSG00000092624.3	ENSMUST00000173038.2	909	5	-193	-1323	-23	1323	multi-exon	FALSE	canonical	1	2	junction_1	2.6809513236909	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTCATGACTATTGTG	NA	False	NA	NA	False	GATAAA	-16	NA	8292126	8283802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_8285708_8286871_8286959_8288132_8288259_8289403_8289442_8291857
Isoform_161454_26	chr7	-	2531	5	FSM	ENSMUSG00000092490.8	ENSMUST00000174729.2	825	5	-183	-1523	16	1093	multi-exon	FALSE	canonical	3	19	junction_4	6.67083203206317	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTCTCACTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	8865834	8857752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865573
Isoform_161456_102	chr7	-	4198	4	FSM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	1	0	1	0	multi-exon	TRUE	canonical	3	55	junction_1	5.43650214343336	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATATGTATTAAGACTT	NA	False	NA	-6	True	NA	NA	NA	10229320	10221155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_10224936_10226205_10226333_10228416_10228456_10229068
Isoform_161459_3	chr7	-	2309	4	FSM	ENSMUSG00000110097.2	ENSMUST00000210573.2	2279	4	-23	-7	-23	7	multi-exon	FALSE	canonical	2	8	junction_3	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTGGAGGATCCTCCC	NA	False	NA	NA	False	NA	NA	NA	10533007	10528161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_10529709_10529792_10529953_10531798_10532271_10532877
Isoform_161462_19	chr7	-	2797	4	FSM	ENSMUSG00000095936.4	ENSMUST00000210521.2	1745	4	2	-1054	2	1054	multi-exon	FALSE	canonical	1	3	junction_3	9.89949493661167	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGTTCGGTCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	11044607	11039250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_11041336_11041419_11041580_11043399_11043872_11044527
Isoform_161463_7	chr7	-	3817	7	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	13.5082279453014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTCATTGTTTTG	NA	False	NA	-1	True	AATAAA	-20	NA	12514526	12502018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12506043_12507367_12507518_12507876_12509586_12514498
Isoform_161465_44	chr7	-	3698	7	FSM	ENSMUSG00000070822.6	ENSMUST00000211392.2	3709	7	11	0	11	0	multi-exon	FALSE	canonical	3	19	junction_4	11.5854314646552	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTCATTGTTTTG	NA	False	NA	-1	True	AATAAA	-20	NA	12514570	12502018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12506043_12507367_12507518_12508039_12509586_12514498
Isoform_161466_4	chr7	-	5185	6	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	11	-1	intron_retention	FALSE	canonical	3	10	junction_4	13.8130373198656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGCCTCATTGTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	12514570	12502019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12507518_12507876_12509586_12514498
Isoform_161467_4	chr7	-	5544	5	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	11	-1	intron_retention	FALSE	canonical	3	26	junction_3	9.3407708461347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGCCTCATTGTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	12514570	12502019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12509586_12514498
Isoform_161469_3	chr7	-	3683	4	NNC	ENSMUSG00000057894.11	novel	2577	4	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.55777733351102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGATTTTTTAAAAATT	NA	False	NA	-13	True	NA	NA	NA	12552780	12538909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_12540520_12541838_12541901_12543619_12545594_12552743
Isoform_161470_3	chr7	-	4940	3	NIC	ENSMUSG00000057894.11	novel	2564	4	NA	NA	-2	-470	intron_retention	FALSE	canonical	3	4	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGACATTTCAGCTTCC	NA	False	NA	NA	False	NA	NA	NA	12552787	12539378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_12540520_12541838_12545594_12552743
Isoform_161472_8	chr7	-	3688	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	5	3034	-1	-1919	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTAGTAGTGTCCCT	NA	False	NA	NA	False	AGTAAA	-15	NA	12552780	12541942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12545594_12552743
Isoform_161473_5	chr7	-	6696	3	NNC	ENSMUSG00000057894.11	novel	6727	2	NA	NA	10	1	intron_retention	TRUE	non_canonical	0	0	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAAATTGTATTTC	NA	False	NA	-6	True	NA	NA	NA	12552769	12538902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_12539994_12540014_12545594_12552743
Isoform_161475_3	chr7	-	2342	10	FSM	ENSMUSG00000030382.16	ENSMUST00000032539.14	2288	10	-54	0	-12	0	multi-exon	TRUE	canonical	1	1	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGTGGATTTGAAC	NA	False	NA	NA	False	AATAAA	-20	NA	12732131	12722272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12722580_12722659_12722791_12722936_12723035_12723280_12723480_12724893_12724985_12725071_12725267_12727241_12727367_12728806_12728966_12730157_12730368_12731304
Isoform_161479_35	chr7	-	2263	3	FSM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	-47	-45	-47	45	multi-exon	FALSE	canonical	3	66	junction_2	65	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743804	12739592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12740308_12740950_12742257_12743562
Isoform_161480_157	chr7	-	2207	3	FSM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	9	-45	1	45	multi-exon	FALSE	canonical	3	66	junction_2	65	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743748	12739592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12740308_12740950_12742257_12743562
Isoform_161483_29	chr7	-	2161	3	FSM	ENSMUSG00000049600.9	ENSMUST00000210282.2	3908	3	-21	1768	1	45	multi-exon	FALSE	canonical	3	10	junction_2	93	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743748	12739592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12740308_12740950_12742257_12743608
Isoform_161485_91	chr7	-	2133	3	NIC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	-47	45	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743804	12739592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_12740308_12740950_12742257_12743692
Isoform_161486_133	chr7	-	2077	3	NIC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	1	45	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743748	12739592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_12740308_12740950_12742257_12743692
Isoform_161487_57	chr7	-	2272	3	NIC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	18	45	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743943	12739592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_12740308_12740950_12742257_12743692
Isoform_161489_48	chr7	-	2213	3	NNC	ENSMUSG00000049600.9	novel	3908	3	NA	NA	191	45	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	92	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743536	12739592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_12740308_12740950_12742257_12743344
Isoform_16149_648	chr11	-	5212	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	3	633	junction_4	229.626625065073	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98915016	98883775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
Isoform_161497_77	chr7	-	914	6	FSM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	11	5	4	-1	multi-exon	FALSE	canonical	3	206	junction_5	1091.38616447159	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAAGGCTGTGAGCT	7102	False	NA	-12	True	AATAAA	-16	NA	12768567	12765941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768428
Isoform_161498_1534	chr7	-	884	6	FSM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	64	1	-4	-1	multi-exon	FALSE	canonical	3	2610	junction_5	213.695671458268	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAAGGCTGTGAGCT	6999	False	NA	-12	True	AATAAA	-16	NA	12768670	12765941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
Isoform_161503_44	chr7	-	734	6	FSM	ENSMUSG00000033916.6	ENSMUST00000211626.2	726	6	-4	-4	-4	-1	multi-exon	FALSE	canonical	3	151	junction_3	1108.87882115225	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAAGGCTGTGAGCT	6999	False	NA	-12	True	AATAAA	-16	NA	12768670	12765941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766718_12766749_12767755_12767970_12768561
Isoform_161505_42	chr7	-	704	5	FSM	ENSMUSG00000033916.6	ENSMUST00000211344.2	606	5	-99	1	-4	-1	multi-exon	FALSE	canonical	3	194	junction_3	1201.14705594278	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAAGGCTGTGAGCT	6999	False	NA	-12	True	AATAAA	-16	NA	12768670	12765941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12767755_12767970_12768561
Isoform_161513_708	chr7	-	1095	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	376	1	-151	-1	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTCTGCCTCTTCCTT	8819	False	NA	-4	True	ATTAAA	-16	NA	12771824	12769165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
Isoform_161516_251	chr7	-	1163	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	308	1	-219	-1	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTCTGCCTCTTCCTT	8751	False	NA	-4	True	ATTAAA	-16	NA	12771892	12769165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
Isoform_161517_181	chr7	-	1490	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	-19	1	-17	-1	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTCTGCCTCTTCCTT	8424	False	NA	-4	True	ATTAAA	-16	NA	12772219	12769165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
Isoform_161520_7	chr7	-	3374	4	NIC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	5.43650214343336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1917	False	NA	-5	True	AATAAA	-15	NA	13012374	12992893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_12995567_13003260_13003574_13011071_13011355_13012269
Isoform_161521_5	chr7	-	3378	4	FSM	ENSMUSG00000070814.18	ENSMUST00000108532.11	3346	4	-31	-1	-31	0	multi-exon	FALSE	canonical	3	9	junction_1	5.18544972870135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1613	False	NA	-5	True	AATAAA	-15	NA	13012678	12992893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12995567_13003260_13003574_13011071_13011355_13012569
Isoform_161522_9	chr7	-	3314	4	FSM	ENSMUSG00000070814.18	ENSMUST00000108532.11	3346	4	33	-1	-5	0	multi-exon	FALSE	canonical	3	9	junction_1	5.18544972870135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1677	False	NA	-5	True	AATAAA	-15	NA	13012614	12992893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_12995567_13003260_13003574_13011071_13011355_13012569
Isoform_161523_3	chr7	-	4244	2	FSM	ENSMUSG00000070814.18	ENSMUST00000140530.2	4208	2	-37	1	14	-1	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATATTATTGTTGA	1658	False	NA	NA	False	NA	NA	NA	13012633	13007174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_13011355_13012569
Isoform_161524_73	chr7	-	1345	3	FSM	ENSMUSG00000041583.9	ENSMUST00000108513.5	1344	3	-10	9	-10	-9	multi-exon	FALSE	canonical	3	46	junction_1	9.5	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGTTTTTGCCAGTT	NA	False	NA	11	True	AATAAA	-27	NA	15573613	15567174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_15567876_15568304_15568891_15573555
Isoform_161526_837	chr7	-	677	6	FSM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	53	6	53	-6	multi-exon	FALSE	canonical	3	1985	junction_1	35.4028247460566	837	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGGGAGATGTTTATT	NA	False	NA	-17	True	AATAAA	-15	NA	15656274	15651138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15654373_15654399_15656176
Isoform_161539_1173	chr7	-	1511	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	11	1654	-8	1	multi-exon	FALSE	canonical	3	1334	junction_1	195.89089579548	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGGGGTCTTGTTATT	NA	False	NA	-8	True	AATAAA	-13	NA	15679988	15671761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
Isoform_161546_87	chr7	-	1794	12	NIC	ENSMUSG00000041560.13	novel	1793	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1683	junction_10	114.507858187885	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679988	15671762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
Isoform_161551_76	chr7	-	3835	16	ISM	ENSMUSG00000006019.16	ENSMUST00000094816.3	4073	17	3041	-70	3041	-7	3prime_fragment	FALSE	canonical	3	60	junction_12	12.4347184215093	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAATTAATTAATTGTT	6948	False	NA	-11	True	AAGAAA	-35	NA	15952877	15931078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
Isoform_161552_5	chr7	-	4002	16	ISM	ENSMUSG00000006019.16	ENSMUST00000094816.3	4073	17	2807	-3	2807	0	3prime_fragment	FALSE	canonical	3	60	junction_12	12.4347184215093	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGCCTCCCTCACCCT	6714	False	NA	-1	True	AATAAA	-19	NA	15953111	15931145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
Isoform_161555_33	chr7	-	3813	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	-14	2	-9	1	multi-exon	FALSE	canonical	3	51	junction_16	13.8562655051785	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGTGCCTCCCTCACC	8428	False	NA	-3	True	AATAAA	-17	NA	15955971	15931147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
Isoform_161556_25	chr7	-	3868	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	1	-68	1	-6	multi-exon	FALSE	canonical	3	51	junction_16	13.8562655051785	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATTAATTAATTGTTT	8443	False	NA	-10	True	AAGAAA	-36	NA	15955956	15931077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
Isoform_161557_3	chr7	-	4049	17	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_16	21.4490675788016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGCCTCCCTCACCC	8427	False	NA	-2	True	AATAAA	-18	NA	15955972	15931146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15953110_15955922
Isoform_161558_8	chr7	-	3954	15	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	3041	-7	intron_retention	FALSE	canonical	3	60	junction_11	12.051970793194	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAATTAATTAATTGTT	6948	False	NA	-11	True	AAGAAA	-35	NA	15952877	15931078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
Isoform_161559_3	chr7	-	4120	15	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	2807	-1	intron_retention	FALSE	canonical	3	60	junction_11	12.051970793194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGCCTCCCTCACCC	6714	False	NA	-2	True	AATAAA	-18	NA	15953111	15931146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
Isoform_161562_35	chr7	-	2161	14	FSM	ENSMUSG00000041375.20	ENSMUST00000118976.10	2175	14	16	-2	0	-1	multi-exon	FALSE	canonical	3	30	junction_1	66.2157134678708	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGAACTGTGCTGCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	16020699	16007967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_161564_31	chr7	-	2141	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	68.79796336603	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTTTGAACTGTGCTGC	NA	False	NA	-8	True	ATTAAA	-14	NA	16020678	16007969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_16008342_16009180_16009301_16009662_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_161565_19	chr7	-	2137	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	66.5924636352925	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGAACTGTGCTGCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	16020699	16007967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_16008342_16009204_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_161566_21	chr7	-	2139	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	69.1555146542963	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGAACTGTGCTGCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	16020698	16007967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_16008342_16009204_16009301_16009662_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_161568_6	chr7	-	1952	12	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	66.4748756366576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACACCCACCCCACTGT	NA	False	NA	-12	True	AATAAA	-16	NA	16019948	16009399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16019851
Isoform_161569_197	chr7	-	1916	12	ISM	ENSMUSG00000041375.20	ENSMUST00000118976.10	2175	14	37	1423	20	-4	5prime_fragment	FALSE	canonical	3	130	junction_1	29.1238449918179	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCCACTGTGTCCTTG	NA	False	NA	-5	True	AATAAA	-23	NA	16020678	16009392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_161570_5	chr7	-	2058	11	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	19	4	intron_retention	FALSE	canonical	3	130	junction_1	30.3374356200388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCACCCCACTGTGT	NA	False	NA	-10	True	AATAAA	-18	NA	16020679	16009397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_161573_94	chr7	-	1946	12	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	37.3980155923805	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTGTCCTTGAACCCC	NA	False	NA	1	True	AATAAA	-29	NA	16020699	16009386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_161593_5188	chr7	-	1894	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	-21	2	0	-2	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	5188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTGTCTCCTCTGT	NA	False	NA	-6	True	AATAAA	-15	NA	16121731	16060976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
Isoform_161594_134	chr7	-	1944	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	-71	2	-50	-2	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTGTCTCCTCTGT	NA	False	NA	-6	True	AATAAA	-15	NA	16121781	16060976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
Isoform_161614_84	chr7	-	7502	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	325	1320	269	1213	multi-exon	FALSE	canonical	3	71	junction_6	12.7366487830285	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCTGCTGTCAGCTT	NA	False	NA	-2	True	AATAAA	-19	NA	16348593	16228963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
Isoform_161615_3	chr7	-	7626	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	202	1319	146	1214	multi-exon	TRUE	canonical	3	71	junction_6	12.7366487830285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGCTGCTGTCAGCTTA	NA	False	NA	-1	True	AATAAA	-20	NA	16348716	16228962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
Isoform_161619_26	chr7	-	2797	3	NIC	ENSMUSG00000048920.9	novel	2827	3	NA	NA	0	-27	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	12.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGAGCCGTTTGTTTCCT	NA	False	NA	NA	False	TTTAAA	-19	NA	16550657	16543197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_16545902_16548988_16549049_16550624
Isoform_161621_81	chr7	-	2796	3	FSM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	4	27	4	-27	multi-exon	FALSE	canonical	3	12	junction_2	10.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGAGCCGTTTGTTTCCT	NA	False	NA	NA	False	TTTAAA	-19	NA	16550653	16543197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16545902_16548988_16549052_16550624
Isoform_161630_3555	chr7	-	2144	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	146	0	-139	0	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	3555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16657893	16649303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
Isoform_161631_55	chr7	-	2308	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	-18	0	-18	0	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16658057	16649303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
Isoform_161632_57	chr7	-	2241	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	49	0	49	0	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16657990	16649303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
Isoform_161654_4616	chr7	-	1968	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	90	14	-17	-14	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	4616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCATCTCAAACCCACC	NA	False	NA	-17	True	AATAAA	-23	NA	16761751	16738578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
Isoform_161655_482	chr7	-	2029	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	29	14	7	-14	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCATCTCAAACCCACC	NA	False	NA	-17	True	AATAAA	-23	NA	16761812	16738578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
Isoform_161656_74	chr7	-	2058	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	0	14	0	-14	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCATCTCAAACCCACC	NA	False	NA	-17	True	AATAAA	-23	NA	16761841	16738578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
Isoform_161660_183	chr7	-	2248	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-17	-14	intron_retention	FALSE	canonical	3	1050	junction_5	58.5383959607102	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCATCTCAAACCCACC	NA	False	NA	-17	True	AATAAA	-23	NA	16761751	16738578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
Isoform_161671_12	chr7	-	6405	15	FSM	ENSMUSG00000004328.16	ENSMUST00000108492.9	6402	15	-8	5	-8	-5	multi-exon	TRUE	canonical	0	0	junction_10	3.50218590632322	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGAGACCGGTGTTGAC	NA	False	NA	-6	True	CATAAA	-20	NA	16796360	16765436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16769891_16771058_16771141_16773482_16773595_16774893_16775166_16776513_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16788606_16788753_16790184_16790376_16796280
Isoform_161673_286	chr7	-	2010	14	FSM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	12	0	-5	0	multi-exon	TRUE	canonical	3	126	junction_7	27.4902887640592	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2772	False	NA	-1	True	AATAAA	-18	NA	18644328	18624807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
Isoform_161675_181	chr7	-	1998	14	NIC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_7	38.5657050949086	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2772	False	NA	-1	True	AATAAA	-18	NA	18644328	18624807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
Isoform_161677_29	chr7	-	2044	2	FSM	ENSMUSG00000040891.7	ENSMUST00000036018.6	2037	2	-7	0	-7	0	multi-exon	FALSE	canonical	3	25	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGTGTCTTTTTCTT	NA	False	NA	-3	True	ATTAAA	-16	NA	18757470	18747208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_18749056_18757273
Isoform_161686_3	chr7	-	3993	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	7	-1290	7	1290	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTTGTGAGACATTTAA	7211	False	NA	NA	False	AATAAA	-22	NA	18883209	18872336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
Isoform_161703_4222	chr7	-	2213	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	0	2	0	-2	multi-exon	TRUE	canonical	3	1236	junction_9	117.461666323765	4222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCTGGAGTACTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	19005742	18990855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
Isoform_161709_64	chr7	-	2260	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	-47	2	-47	-2	multi-exon	FALSE	canonical	3	1236	junction_9	117.461666323765	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCTGGAGTACTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	19005789	18990855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
Isoform_161719_149	chr7	-	2247	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	3	243	junction_7	341.113250988583	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCTGGAGTACTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	19005779	18990855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
Isoform_161720_600	chr7	-	2210	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	243	junction_7	341.113250988583	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCTGGAGTACTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	19005742	18990855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
Isoform_161735_4	chr7	-	2146	4	ISM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	220	1	220	-1	intron_retention	FALSE	canonical	3	13	junction_1	6.12825877028341	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTTCTTCGTTGTTG	9775	False	NA	0	True	AATAAA	-16	NA	19013769	19010730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194
Isoform_161736_8	chr7	-	1530	5	FSM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	118	0	118	0	multi-exon	FALSE	canonical	3	13	junction_1	5.35607132140714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTCTTCGTTGTTGT	9673	False	NA	1	True	AATAAA	-17	NA	19013871	19010729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194_19012313_19013031
Isoform_161737_12	chr7	-	1446	5	FSM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	202	0	202	0	multi-exon	FALSE	canonical	3	13	junction_1	5.35607132140714	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTCTTCGTTGTTGT	9757	False	NA	1	True	AATAAA	-17	NA	19013787	19010729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194_19012313_19013031
Isoform_161739_77	chr7	-	2192	4	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	13	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.490987293304	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTTACTTTTGATAC	2171	False	NA	-15	True	NA	NA	NA	19093393	19089934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_19090087_19090124_19091942_19093014_19093157_19093312
Isoform_161741_124	chr7	-	1878	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	15	346	15	-346	multi-exon	FALSE	canonical	3	228	junction_1	10	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGTTCTGCCTCTTAT	2173	False	NA	-8	True	ATTAAA	-25	NA	19093391	19090284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19091942_19093014_19093157_19093312
Isoform_161751_3	chr7	-	1843	13	FSM	ENSMUSG00000040714.15	ENSMUST00000047170.10	1901	13	63	-5	63	2	multi-exon	TRUE	canonical	2	2	junction_12	7.70641868113126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGATCTGCTCAATTCG	6438	False	NA	NA	False	NA	NA	NA	19133740	19128359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133638
Isoform_161752_14	chr7	-	1822	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108459.9	1849	13	30	-3	-13	0	multi-exon	FALSE	canonical	3	11	junction_12	5.52959210872636	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCGATCTGCTCAATT	6362	False	NA	NA	False	NA	NA	NA	19133816	19128361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133733
Isoform_161753_7	chr7	-	1769	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108459.9	1849	13	-2	82	-2	-21	multi-exon	FALSE	canonical	3	11	junction_12	5.52959210872636	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGTTTGCCGAGGGCC	6330	False	NA	NA	False	ATTAAA	-16	NA	19133848	19128446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133733
Isoform_161754_25	chr7	-	1809	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108458.10	1823	13	11	3	11	0	multi-exon	FALSE	canonical	2	9	junction_12	5.99247212944893	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGCGATCTGCTCA	2160	False	NA	NA	False	NA	NA	NA	19138018	19128364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
Isoform_161756_22	chr7	-	3610	18	FSM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	26	330	0	-3	multi-exon	TRUE	canonical	2	4	junction_2	31.7309188501163	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGACGTACAGAGTCCG	NA	False	NA	-6	True	NA	NA	NA	19192720	19159029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19160337_19161998_19162044_19163030_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
Isoform_161758_7	chr7	-	3285	18	FSM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	-11	692	-11	0	multi-exon	FALSE	canonical	2	4	junction_2	31.7309188501163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGACCTCCTCCCTGG	NA	False	NA	-7	True	AATAAA	-17	NA	19192757	19159391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19160337_19161998_19162044_19163030_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
Isoform_161765_125	chr7	-	3202	17	FSM	ENSMUSG00000030397.12	ENSMUST00000085715.7	3886	17	-7	691	-7	1	multi-exon	FALSE	canonical	3	72	junction_16	12.0219525764328	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCGACCTCCTCCCTGGC	NA	False	NA	-6	True	AATAAA	-18	NA	19192753	19159390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
Isoform_161766_285	chr7	-	3520	17	FSM	ENSMUSG00000030397.12	ENSMUST00000085715.7	3886	17	38	328	12	-1	multi-exon	FALSE	canonical	3	72	junction_16	12.0219525764328	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACGTACAGAGTCCGTC	NA	False	NA	-4	True	NA	NA	NA	19192708	19159027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
Isoform_161769_5	chr7	-	2350	13	ISM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	-7	8022	-7	-7330	5prime_fragment	FALSE	canonical	3	72	junction_12	12.5507303904328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGTATAAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	19192753	19166721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
Isoform_161770_42	chr7	-	1846	2	FSM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	15	1327	15	-1327	multi-exon	FALSE	canonical	3	24	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTACCCTCTTGATT	NA	False	NA	NA	False	NA	NA	NA	19242277	19239737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19241536_19242229
Isoform_161773_302	chr7	-	2978	13	FSM	ENSMUSG00000051403.10	ENSMUST00000058444.10	3816	13	838	0	838	0	multi-exon	FALSE	canonical	3	79	junction_4	17.5752351019521	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8352	False	NA	-6	True	AATAAA	-15	NA	19296163	19264724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_161775_114	chr7	-	3170	13	FSM	ENSMUSG00000051403.10	ENSMUST00000058444.10	3816	13	646	0	646	0	multi-exon	FALSE	canonical	3	79	junction_4	17.5752351019521	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8160	False	NA	-6	True	AATAAA	-15	NA	19296355	19264724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_161779_8	chr7	-	3261	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	659	0	intron_retention	FALSE	canonical	3	93	junction_3	15.4117053292952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8173	False	NA	-6	True	AATAAA	-15	NA	19296342	19264724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_161780_17	chr7	-	3078	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	842	0	intron_retention	FALSE	canonical	3	93	junction_3	15.4117053292952	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8356	False	NA	-6	True	AATAAA	-15	NA	19296159	19264724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_161782_9	chr7	-	3102	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	835	0	intron_retention	FALSE	canonical	3	79	junction_3	17.4933281260491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8349	False	NA	-6	True	AATAAA	-15	NA	19296166	19264724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19265352_19265431_19265519_19265708_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_161784_10	chr7	-	3199	11	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	842	0	intron_retention	FALSE	canonical	3	100	junction_7	14.6574213284602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8356	False	NA	-6	True	AATAAA	-15	NA	19296159	19264724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19265352_19265431_19265519_19265708_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_161789_7	chr7	-	3056	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	840	0	intron_retention	FALSE	canonical	3	79	junction_3	17.7102482354704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8354	False	NA	-6	True	AATAAA	-15	NA	19296161	19264724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_161791_15	chr7	-	846	2	FSM	ENSMUSG00000044709.7	ENSMUST00000122127.2	652	2	-53	-141	-53	0	multi-exon	FALSE	canonical	3	34	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	3266	False	NA	-6	True	AATAAA	-22	NA	19306946	19298870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19299602_19306831
Isoform_161792_4	chr7	-	935	3	NNC	ENSMUSG00000044709.7	novel	652	2	NA	NA	-12	178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCTGGCTCTGGCTTTC	3307	False	NA	NA	False	AAGAAA	-13	NA	19306905	19298692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_19298802_19298849_19299602_19306831
Isoform_161793_107	chr7	-	818	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	-52	-3	-10	0	multi-exon	FALSE	canonical	3	225	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	2892	False	NA	-6	True	AATAAA	-22	NA	19307320	19298870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19299602_19307233
Isoform_161794_50	chr7	-	933	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	13	186	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	112.5	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCTTTCCTTTTCAT	2915	False	NA	NA	False	AAGAAA	-21	NA	19307297	19298684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_19298802_19298849_19299602_19307233
Isoform_161795_5	chr7	-	1354	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	24	180	intron_retention	FALSE	non_canonical	0	0	junction_1	112.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCTCTGGCTTTCCT	2488	False	NA	NA	False	AAGAAA	-15	NA	19307724	19298690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_19298802_19298849_19299602_19307233
Isoform_161796_9	chr7	-	1220	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	-454	-3	26	0	multi-exon	FALSE	canonical	3	225	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	2490	False	NA	-6	True	AATAAA	-22	NA	19307722	19298870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19299602_19307233
Isoform_161798_20	chr7	-	906	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	11	178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCTGGCTCTGGCTTTC	2475	False	NA	NA	False	AAGAAA	-13	NA	19307737	19298692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_19298802_19298849_19299602_19307692
Isoform_161799_28	chr7	-	798	2	NIC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	2453	False	NA	-6	True	AATAAA	-22	NA	19307759	19298870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19299602_19307692
Isoform_161802_36	chr7	-	2164	21	FSM	ENSMUSG00000061028.8	ENSMUST00000208068.2	2151	21	-9	-4	-7	-1	multi-exon	FALSE	canonical	3	34	junction_6	53.6276747584678	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338395	19314963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_161808_14	chr7	-	2141	21	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	4	junction_20	60.841104526463	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19338379	19314962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337227_19338336
Isoform_161809_7	chr7	-	2208	21	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_20	61.2201764126828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACATGCTGTCCCCTT	NA	False	NA	-7	True	AATAAA	-23	NA	19338358	19314965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338249
Isoform_161810_402	chr7	-	2160	21	FSM	ENSMUSG00000061028.8	ENSMUST00000086041.7	2180	21	17	3	-6	0	multi-exon	FALSE	canonical	3	161	junction_6	32.5501152071694	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19338394	19314962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_161811_10	chr7	-	2179	21	FSM	ENSMUSG00000061028.8	ENSMUST00000086041.7	2180	21	-7	8	-7	0	multi-exon	FALSE	canonical	3	161	junction_6	32.5501152071694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCACATGCTGTCCCC	NA	False	NA	-9	True	AATAAA	-21	NA	19338418	19314967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_161816_97	chr7	-	2413	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-6	0	intron_retention	FALSE	canonical	3	190	junction_19	27.1360581324836	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19338394	19314962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_161818_23	chr7	-	2397	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-6	0	intron_retention	FALSE	canonical	3	13	junction_13	58.629500104883	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19338394	19314962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_161823_19	chr7	-	2039	10	ISM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	1381	0	377	0	3prime_fragment	FALSE	canonical	3	150	junction_9	33.2532371022398	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	19361982	19340141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847
Isoform_161824_257	chr7	-	2297	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_10	54.7927002437368	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	19362345	19340141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362000
Isoform_161830_9	chr7	-	2221	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	72.4309326185988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGGGGTCTTCTTTC	NA	False	NA	-6	True	AATAAA	-15	NA	19362375	19340146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362101
Isoform_161831_9	chr7	-	2011	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	111	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	72.4309326185988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTTTGGGGGTCTTCTT	NA	False	NA	-8	True	AATAAA	-13	NA	19362598	19340148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362532
Isoform_161833_20	chr7	-	2272	11	FSM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	-77	5	-77	1	multi-exon	FALSE	canonical	3	48	junction_10	60.3088716525189	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGGGGTCTTCTTTC	NA	False	NA	-6	True	AATAAA	-15	NA	19363440	19340146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19363115
Isoform_161834_355	chr7	-	2188	11	FSM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	11	1	11	-1	multi-exon	FALSE	canonical	3	48	junction_10	60.3088716525189	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGGTCTTCTTTCTTCT	NA	False	NA	-2	True	AATAAA	-19	NA	19363352	19340142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19363115
Isoform_16184_997	chr11	-	5218	36	FSM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	-1	4	-1	-4	multi-exon	FALSE	canonical	3	1094	junction_4	183.786113485769	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915016	98883772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
Isoform_161857_4398	chr7	-	2459	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	13	1671	1	7	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	4398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCACCTCCTCTGCC	5161	False	NA	-10	True	AATAAA	-28	NA	19398945	19367166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
Isoform_161859_69	chr7	-	4121	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	13	9	1	6	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCATGTACTGTCCCCA	5161	False	NA	NA	False	AAAACA	-8	NA	19398945	19365504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
Isoform_161877_16	chr7	-	493	3	FSM	ENSMUSG00000040564.15	ENSMUST00000108451.4	532	3	37	2	3	-2	multi-exon	FALSE	canonical	3	1274	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTCCCTGAAGTGCTTT	NA	False	NA	-6	True	AATAAA	-17	NA	19426526	19423407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19423562_19425812_19425961_19426335
Isoform_161878_427	chr7	-	408	4	FSM	ENSMUSG00000040564.15	ENSMUST00000045035.12	432	4	22	2	0	-2	multi-exon	FALSE	canonical	3	965	junction_3	145.90027035235	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTCCCTGAAGTGCTTT	NA	False	NA	-6	True	AATAAA	-17	NA	19426563	19423407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19423562_19425812_19425961_19426335_19426412_19426533
Isoform_161879_7	chr7	-	785	3	NIC	ENSMUSG00000040564.15	novel	432	4	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	965	junction_2	154.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCTCCCTGAAGTGCTT	NA	False	NA	-7	True	AATAAA	-16	NA	19426566	19423408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19423562_19425812_19426412_19426533
Isoform_16188_286	chr11	-	5563	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	633	junction_3	222.753904349877	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98915016	98883774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
Isoform_161889_14696	chr7	-	1110	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	137	161	-1	2	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	14696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19432976	19430194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
Isoform_161891_393	chr7	-	1190	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	57	161	57	2	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19433056	19430194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
Isoform_161915_520	chr7	-	1632	9	FSM	ENSMUSG00000002984.18	ENSMUST00000032555.10	1646	9	12	2	12	-2	multi-exon	TRUE	canonical	3	2643	junction_3	135.037899772619	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGGAAAAAAAAATAGGATC	9906	False	NA	-31	True	NA	NA	NA	19449338	19435255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905
Isoform_161922_2879	chr7	-	1558	10	FSM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	1	18	1	-2	multi-exon	FALSE	canonical	3	2342	junction_9	200.868177398407	2879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGGAAAAAAAAATAGGATC	9882	False	NA	-31	True	NA	NA	NA	19449362	19435255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
Isoform_161929_624	chr7	-	2668	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	48	19	8	-19	multi-exon	FALSE	canonical	3	309	junction_4	306.654528745297	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTGTGTTTTCTGTGA	NA	False	NA	-21	True	NA	NA	NA	19483450	19450587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
Isoform_161931_32	chr7	-	2701	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	13	21	13	-21	multi-exon	FALSE	canonical	3	309	junction_4	306.654528745297	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTCTTGTGTTTTCTGT	NA	False	NA	-23	True	NA	NA	NA	19483485	19450589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
Isoform_161938_892	chr7	-	1895	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	57	3	57	-3	multi-exon	FALSE	canonical	3	559	junction_1	167.41517255016	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGGGGTGTTTTGTA	NA	False	NA	-7	True	AATAAA	-13	NA	19483401	19458088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
Isoform_161939_673	chr7	-	1920	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	32	3	32	-3	multi-exon	FALSE	canonical	3	559	junction_1	167.41517255016	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGGGGTGTTTTGTA	NA	False	NA	-7	True	AATAAA	-13	NA	19483426	19458088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
Isoform_161952_313	chr7	-	2408	15	FSM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	12	9	12	-9	multi-exon	FALSE	canonical	3	510	junction_11	49.5145824737624	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTCCTACCGCCAGG	3924	False	NA	-14	True	AATAAA	-17	NA	19504460	19490064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
Isoform_161953_2150	chr7	-	2370	15	FSM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	52	7	0	-7	multi-exon	TRUE	canonical	3	510	junction_11	49.5145824737624	2150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCCTACCGCCAGGTT	3964	False	NA	-12	True	AATAAA	-19	NA	19504420	19490062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
Isoform_161958_33	chr7	-	2249	13	ISM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	52	1814	0	-1388	5prime_fragment	FALSE	canonical	3	510	junction_9	43.4193857114026	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGGAAAAAAGAAGAA	3964	False	NA	NA	False	NA	NA	NA	19504420	19491869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
Isoform_161960_53	chr7	-	1652	12	FSM	ENSMUSG00000040525.14	ENSMUST00000043822.8	1662	12	9	1	5	-1	multi-exon	FALSE	canonical	2	11	junction_1	3.71283233757493	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCCGTGTGTGACAGA	NA	False	NA	0	True	AATAAA	-19	NA	19530725	19513643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19513722_19514697_19514773_19514894_19515002_19518727_19518806_19519162_19519325_19520107_19520240_19522893_19522982_19524324_19524463_19526032_19526155_19526433_19526591_19526733_19526881_19530357
Isoform_161969_1561	chr7	-	1848	9	FSM	ENSMUSG00000053175.18	ENSMUST00000120537.8	1850	9	0	2	0	-2	multi-exon	FALSE	canonical	3	615	junction_1	42.6314144733669	1561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTTGCTTTCCATCTG	5729	False	NA	-10	True	AATAAA	-15	NA	19556695	19542388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_161970_69	chr7	-	1920	9	FSM	ENSMUSG00000053175.18	ENSMUST00000120537.8	1850	9	-70	0	-70	0	multi-exon	FALSE	canonical	3	615	junction_1	42.6314144733669	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5659	False	NA	-8	True	AATAAA	-17	NA	19556765	19542386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_161980_23	chr7	-	2086	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	0	0	intron_retention	TRUE	canonical	3	615	junction_1	42.8009154965982	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5729	False	NA	-8	True	AATAAA	-17	NA	19556695	19542386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19542982_19543066_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_161983_32	chr7	-	1935	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_5	25.6395740039112	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5729	False	NA	-8	True	AATAAA	-17	NA	19556695	19542386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_161984_42	chr7	-	2171	7	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_4	25.3223660470783	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5729	False	NA	-8	True	AATAAA	-17	NA	19556695	19542386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_161996_199	chr7	-	2852	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	47	6	0	-6	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTCCATTGTCCGAG	9978	False	NA	-7	True	NA	NA	NA	19655038	19637508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
Isoform_161998_19	chr7	-	2905	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	-6	6	-6	-6	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTCCATTGTCCGAG	9925	False	NA	-7	True	NA	NA	NA	19655091	19637508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
Isoform_162006_3	chr7	-	3654	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	-6	2754	-6	176	multi-exon	TRUE	canonical	3	37	junction_1	10.4986771653491	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACAGATGTACCATTT	NA	False	NA	NA	False	NA	NA	NA	23907580	23896125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
Isoform_162009_3	chr7	-	2786	4	FSM	ENSMUSG00000074283.6	ENSMUST00000206362.2	2932	4	-126	272	-126	137	multi-exon	FALSE	canonical	1	1	junction_3	7.93025150224688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATAGAGAAGATCGGAT	NA	False	NA	NA	False	NA	NA	NA	23937111	23927268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_23929266_23933775_23933903_23936042_23936101_23936507
Isoform_162011_21	chr7	-	5019	4	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-135	2238	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	2.49443825784929	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTCATGGGTCTCT	NA	False	NA	NA	False	NA	NA	NA	23937120	23924758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_23929266_23933775_23933903_23936042_23936101_23936793
Isoform_162013_23	chr7	-	2342	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	127	11	89	7	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCGTATCATGTGGA	NA	False	NA	-4	True	TATAAA	-12	NA	23998973	23990474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
Isoform_162014_30	chr7	-	2135	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	334	11	-31	7	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCGTATCATGTGGA	NA	False	NA	-4	True	TATAAA	-12	NA	23998766	23990474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
Isoform_162015_13	chr7	-	2381	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	88	11	50	7	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCGTATCATGTGGA	NA	False	NA	-4	True	TATAAA	-12	NA	23999012	23990474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
Isoform_162016_7	chr7	-	2171	6	NIC	ENSMUSG00000050605.18	novel	2480	7	NA	NA	89	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	15.3310143173894	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAAAGACTCGTATCAT	NA	False	NA	-9	True	TATAAA	-7	NA	23998973	23990479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23997698_23997801_23998617
Isoform_162017_9	chr7	-	1978	6	NIC	ENSMUSG00000050605.18	novel	2480	7	NA	NA	-45	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	15.3310143173894	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAAAGACTCGTATCAT	NA	False	NA	-9	True	TATAAA	-7	NA	23998780	23990479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23997698_23997801_23998617
Isoform_162018_5	chr7	-	2492	6	FSM	ENSMUSG00000074282.11	ENSMUST00000108436.8	2599	6	-20	127	-1	-35	multi-exon	FALSE	canonical	1	2	junction_2	3.8262252939418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTTAAAATACATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	24016050	24001255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24003299_24008495_24008623_24010889_24010929_24011806_24011921_24013774_24013837_24015943
Isoform_162019_4	chr7	-	2609	5	NIC	ENSMUSG00000074282.11	novel	2529	5	NA	NA	1	-35	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	4.26468052730799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTTAAAATACATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	24016048	24001255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_24003299_24008495_24008623_24011806_24011921_24013774_24013837_24015785
Isoform_162020_6	chr7	-	2485	5	FSM	ENSMUSG00000074282.11	ENSMUST00000032673.15	2529	5	41	3	-1	-3	multi-exon	FALSE	canonical	2	9	junction_1	0.866025403784439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACATGTTTGAATTGTAT	NA	False	NA	NA	False	NA	NA	NA	24016050	24001223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24003299_24008495_24008623_24011806_24011921_24013774_24013837_24015943
Isoform_162022_3	chr7	-	1066	4	NNC	ENSMUSG00000066721.4	novel	2741	4	NA	NA	0	-1605	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2.16024689946929	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCTGCTGTATGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	24287066	24284867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_24285564_24286078_24286243_24286582_24286668_24286945
Isoform_162023_13	chr7	-	1048	6	FSM	ENSMUSG00000062773.7	ENSMUST00000078001.7	1059	6	8	3	8	-3	multi-exon	FALSE	canonical	2	2	junction_5	1.72046505340853	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGCGCGTGCATGC	1010	False	NA	NA	False	AATAAA	-18	NA	24371467	24367434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24367828_24367933_24368066_24369138_24369325_24369757_24369899_24370003_24370109_24371376
Isoform_162024_656	chr7	-	821	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	82	-4	-34	4	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGGTATTTTCTCTT	4577	False	NA	-1	True	AATAAA	-28	NA	24672097	24669172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
Isoform_162026_9	chr7	-	932	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	-32	-1	-32	1	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCCTGGTATTTTCT	4463	False	NA	-4	True	AATAAA	-25	NA	24672211	24669175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
Isoform_162027_6	chr7	-	2311	13	ISM	ENSMUSG00000040907.16	ENSMUST00000196684.2	3642	23	11483	1	11435	-1	intron_retention	FALSE	canonical	3	25	junction_10	11.3907857498945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTGTGTGTGTTAT	NA	False	NA	-5	True	AATATA	-14	NA	24693885	24677595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556
Isoform_162029_30	chr7	-	3571	23	FSM	ENSMUSG00000040907.16	ENSMUST00000080882.11	3621	23	47	3	-4	0	multi-exon	FALSE	canonical	2	6	junction_18	15.2038490124504	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTGTGTGTGTTATG	NA	False	NA	-4	True	AATATA	-15	NA	24705336	24677594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700584_24705179
Isoform_162033_3	chr7	-	1850	4	ISM	ENSMUSG00000054499.10	ENSMUST00000058702.7	1828	5	574	0	574	0	3prime_fragment	FALSE	canonical	3	80	junction_2	8.17856276425687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24918710	24902264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225
Isoform_162034_8	chr7	-	1728	5	NIC	ENSMUSG00000054499.10	novel	1942	6	NA	NA	-23	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	38.1903129078566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGCTCTCCGGTACTT	NA	False	NA	-7	True	AATAAA	-28	NA	24919319	24902263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918457_24919188
Isoform_162035_43	chr7	-	1710	5	FSM	ENSMUSG00000054499.10	ENSMUST00000206750.2	4594	5	-39	2923	-27	2	multi-exon	FALSE	canonical	3	21	junction_4	29.7237278954037	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTCTCCGGTACTTT	NA	False	NA	-6	True	AATAAA	-29	NA	24919323	24902262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918457_24919211
Isoform_162037_12	chr7	-	1858	5	FSM	ENSMUSG00000054499.10	ENSMUST00000058702.7	1828	5	-28	-2	-16	2	multi-exon	FALSE	canonical	2	7	junction_4	35.6405667743935	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTCTCCGGTACTTT	NA	False	NA	-6	True	AATAAA	-29	NA	24919312	24902262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919188
Isoform_162039_50	chr7	-	1843	5	NIC	ENSMUSG00000054499.10	novel	1828	5	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	23.466731770743	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24919322	24902264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919211
Isoform_16204_423	chr11	-	5567	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	1094	junction_3	172.605656925746	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCCATTCCTCTTATT	NA	False	NA	-5	True	AATAAA	-17	NA	98915016	98883773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
Isoform_162040_29	chr7	-	1867	5	NIC	ENSMUSG00000054499.10	novel	1942	6	NA	NA	-49	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	23.466731770743	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGCTCTCCGGTACTT	NA	False	NA	-7	True	AATAAA	-28	NA	24919345	24902263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919211
Isoform_162042_10	chr7	-	1979	6	NIC	ENSMUSG00000054499.10	novel	1942	6	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	36.5316301306142	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24920099	24902264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919211_24919353_24919993
Isoform_162044_10	chr7	-	3844	10	ISM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	52	1	52	-1	intron_retention	FALSE	canonical	3	363	junction_8	12.2090838474908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	-1	True	AATAAA	-20	NA	24937224	24927683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977
Isoform_162047_431	chr7	-	2198	11	FSM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	61	1	61	-1	multi-exon	FALSE	canonical	3	276	junction_10	34.6278789416851	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	-1	True	AATAAA	-20	NA	24937215	24927683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
Isoform_162051_8	chr7	-	1935	11	Fusion	ENSMUSG00000057177.13_ENSMUSG00000040857.16	novel	2260	11	NA	NA	2	-1	intron_retention	FALSE	canonical	2	7	junction_10	113.923658649115	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	4514	False	NA	-1	True	AATAAA	-20	NA	24950153	24927683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24950003
Isoform_162052_209	chr7	-	2704	4	FSM	ENSMUSG00000040857.16	ENSMUST00000045847.15	3505	4	34	767	3	-767	multi-exon	FALSE	canonical	3	7	junction_2	2.82842712474619	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4515	False	NA	-15	True	AATAAA	-14	NA	24950152	24942752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24950003
Isoform_162053_7	chr7	-	3474	4	FSM	ENSMUSG00000040857.16	ENSMUST00000045847.15	3505	4	32	-1	1	1	multi-exon	FALSE	canonical	3	7	junction_2	2.82842712474619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATGCATATGAATGTT	4513	False	NA	NA	False	NA	NA	NA	24950154	24941984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24950003
Isoform_162054_9	chr7	-	2808	3	FSM	ENSMUSG00000040857.16	ENSMUST00000116343.3	690	3	1	-2119	1	-767	multi-exon	FALSE	canonical	3	7	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4513	False	NA	-15	True	AATAAA	-14	NA	24950154	24942752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24945175_24945512_24945748_24950003
Isoform_162059_8	chr7	-	1221	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	-52	-310	0	0	multi-exon	FALSE	canonical	3	385	junction_2	17.4570902500961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8551	False	NA	-2	True	ATTAAA	-15	NA	24997359	24994473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
Isoform_162061_24	chr7	-	1173	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	-4	-310	-4	0	multi-exon	TRUE	canonical	3	385	junction_2	17.4570902500961	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8599	False	NA	-2	True	ATTAAA	-15	NA	24997311	24994473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
Isoform_162063_212	chr7	-	848	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	53	0	1	0	multi-exon	FALSE	canonical	3	245	junction_5	66.0714764478591	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8552	False	NA	-2	True	ATTAAA	-15	NA	24997358	24994473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
Isoform_162064_17	chr7	-	903	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	245	junction_5	66.0714764478591	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8497	False	NA	-2	True	ATTAAA	-15	NA	24997413	24994473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
Isoform_162066_58	chr7	-	2788	10	FSM	ENSMUSG00000003123.16	ENSMUST00000003207.11	3613	10	703	122	703	-4	multi-exon	FALSE	canonical	3	24	junction_6	4.8099690715363	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGAGTGTGTTTTC	NA	False	NA	-4	True	AATAAA	-23	NA	25095101	25079073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
Isoform_162068_44	chr7	-	3112	10	FSM	ENSMUSG00000003123.16	ENSMUST00000003207.11	3613	10	379	122	379	-4	multi-exon	FALSE	canonical	3	24	junction_6	4.8099690715363	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGAGTGTGTTTTC	NA	False	NA	-4	True	AATAAA	-23	NA	25095425	25079073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
Isoform_162071_17	chr7	-	3182	7	FSM	ENSMUSG00000074272.11	ENSMUST00000098668.3	1478	7	-80	-1624	-11	2	multi-exon	FALSE	canonical	3	11	junction_6	8	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTGTGGGGTTTTCTG	2837	False	NA	1	True	AATAAA	-23	NA	25177039	25161129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25163326_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25175768_25176129_25176895
Isoform_162073_3	chr7	-	3636	8	FSM	ENSMUSG00000074272.11	ENSMUST00000098666.9	3656	8	21	-1	1	1	multi-exon	FALSE	canonical	1	2	junction_5	11.2122382116278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTTGTGGGGTTTTCT	2869	False	NA	0	True	AATAAA	-22	NA	25177007	25161130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25163326_25164273_25164306_25165741_25165863_25171222_25171499_25173222_25173478_25173944_25174230_25175768_25176129_25176895
Isoform_162074_14	chr7	-	3102	7	NNC	ENSMUSG00000074272.11	novel	3656	8	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	non_canonical	1	5	junction_1	10.5738146170413	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACTTTGTGGGGTTTTC	2837	False	NA	-1	True	AATAAA	-21	NA	25177039	25161131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_25162739_25162763_25163326_25164273_25164306_25165741_25165863_25171222_25171499_25175768_25176129_25176895
Isoform_162076_3	chr7	-	4047	5	NIC	ENSMUSG00000074272.11	novel	1722	8	NA	NA	-8	-5	intron_retention	FALSE	canonical	3	9	junction_1	9.97496867163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATAGCACTTTGTGGGG	2860	False	NA	-6	True	AATAAA	-16	NA	25177016	25161136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_25164306_25165741_25165863_25171222_25171499_25175768_25176129_25176895
Isoform_162082_643	chr7	-	1668	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	231	0	231	0	multi-exon	FALSE	canonical	3	232	junction_4	24.6373699895098	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	9913	False	NA	-9	True	AGTAAA	-19	NA	25358175	25329370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
Isoform_162083_10	chr7	-	1931	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	-32	0	-32	0	multi-exon	FALSE	canonical	3	232	junction_4	24.6373699895098	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	9650	False	NA	-9	True	AGTAAA	-19	NA	25358438	25329370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
Isoform_162085_9	chr7	-	1719	10	NNC	ENSMUSG00000060376.8	novel	1899	9	NA	NA	231	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	113.260216065527	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	9913	False	NA	-9	True	AGTAAA	-19	NA	25358175	25329370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25348652_25348704_25358057
Isoform_162087_7	chr7	-	2760	5	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	40.4992283877113	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCATCCATTCATCT	NA	False	NA	-12	True	ATTAAA	-15	NA	25418426	25410539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_25412539_25413777_25413908_25414175_25414270_25415159_25415613_25418342
Isoform_162090_9	chr7	-	3113	6	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	14	-8	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	47.4189835403502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCATCCATTCATCTG	NA	False	NA	-11	True	ATTAAA	-16	NA	25418456	25410538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25416278_25416425_25418342
Isoform_162091_6	chr7	-	3066	6	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	-5	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	51.5309615668095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCATCCATTCATCT	NA	False	NA	-12	True	ATTAAA	-15	NA	25418421	25410539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25417569_25417705_25418342
Isoform_162092_178	chr7	-	2971	5	FSM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	53	8	10	-8	multi-exon	FALSE	canonical	3	101	junction_3	5.52268050859363	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCATCCATTCATCTG	NA	False	NA	-11	True	ATTAAA	-16	NA	25418460	25410538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25418342
Isoform_162095_9	chr7	-	1222	4	FSM	ENSMUSG00000002608.9	ENSMUST00000154143.8	1158	4	-8	-56	-5	56	multi-exon	FALSE	canonical	3	101	junction_2	5.43650214343336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTGGGGGACAGAGGT	NA	False	NA	NA	False	NA	NA	NA	25418436	25413502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25413908_25414175_25414446_25415159_25415613_25418342
Isoform_1621_73	chr10	-	5762	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-15	4	-15	-4	multi-exon	FALSE	canonical	3	61	junction_24	17.9698339045066	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGACTTTGATGTTTGG	NA	False	NA	-7	True	AATAAA	-15	NA	12424638	12257937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
Isoform_162132_424	chr7	-	3802	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-2	-16	-2	16	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAAGTGTTACTGCAGT	9540	False	NA	-12	True	AATAAA	-41	NA	25454184	25420573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_162133_990	chr7	-	3465	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	2	317	2	0	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGAGTCGTGGTAGTT	9544	False	NA	NA	False	NA	NA	NA	25454180	25420906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_162136_59	chr7	-	3853	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-386	317	-386	0	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGAGTCGTGGTAGTT	9698	False	NA	NA	False	NA	NA	NA	25454568	25420906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_162137_150	chr7	-	3673	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-201	312	-201	5	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCGTGGTAGTTTCTGG	9883	False	NA	NA	False	NA	NA	NA	25454383	25420901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_162143_76	chr7	-	3984	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-201	1	-201	-1	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCAGGGTTGAAACCC	9883	False	NA	-29	True	AATAAA	-24	NA	25454383	25420590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_162149_28	chr7	-	4150	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-368	2	-368	-2	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	9716	False	NA	-30	True	AATAAA	-23	NA	25454550	25420591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_162154_47	chr7	-	3714	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	-21	-339	-14	22	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTACTGCAGTTGGCCT	9528	False	NA	-6	True	NA	NA	NA	25454196	25420567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
Isoform_162156_67	chr7	-	3387	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	-33	0	-26	0	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGAGTCGTGGTAGTT	9516	False	NA	NA	False	NA	NA	NA	25454208	25420906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
Isoform_162164_64	chr7	-	3089	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-1438	5	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_14	261.486810452872	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCGTGGTAGTTTCTGG	8646	False	NA	NA	False	NA	NA	NA	25455620	25420901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
Isoform_162166_33	chr7	-	3390	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-1428	-1	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_14	261.486810452872	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCAGGGTTGAAACCC	8656	False	NA	-29	True	AATAAA	-24	NA	25455610	25420590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
Isoform_162173_43	chr7	-	2645	9	FSM	ENSMUSG00000040703.12	ENSMUST00000043314.10	2745	9	101	-1	6	1	multi-exon	FALSE	canonical	3	20	junction_7	4.7368238303741	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGACCCCCTCTGCCTGTG	1705	False	NA	-5	True	AATAAA	-19	NA	25515977	25501898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25503185_25503340_25503483_25505295_25505484_25507468_25507611_25508603_25508784_25508862_25509024_25511026_25511177_25514309_25514476_25515747
Isoform_162174_3	chr7	-	2794	9	FSM	ENSMUSG00000040703.12	ENSMUST00000043314.10	2745	9	-48	-1	-48	1	multi-exon	FALSE	canonical	3	20	junction_7	4.7368238303741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGACCCCCTCTGCCTGTG	1556	False	NA	-5	True	AATAAA	-19	NA	25516126	25501898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_25503185_25503340_25503483_25505295_25505484_25507468_25507611_25508603_25508784_25508862_25509024_25511026_25511177_25514309_25514476_25515747
Isoform_162175_3	chr7	-	2599	9	NIC	ENSMUSG00000040703.12	novel	2745	9	NA	NA	-55	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	10.7812047100498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCCTCTGCCTGTGTGA	1549	False	NA	-2	True	AATAAA	-22	NA	25516133	25501895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_25503185_25503340_25503483_25505295_25505484_25507468_25507611_25508603_25508784_25508862_25509024_25511026_25511177_25514309_25514476_25515952
Isoform_162177_5	chr7	-	2261	11	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24734	-254	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	20.9334660293034	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATTCATGTGTGTTTT	NA	False	NA	-1	True	CATAAA	-37	NA	26410596	26364905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26410317
Isoform_162178_3	chr7	-	2527	14	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24714	-323	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	23.3121346363171	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGTGTCTTGTGCCTT	NA	False	NA	1	True	NA	NA	NA	26410576	26364974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26392289_26392411_26392894_26393053_26410317
Isoform_162179_14	chr7	-	2064	10	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24742	-328	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	17.7332776384533	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGTTTGGTGTCTTGT	NA	False	NA	-4	True	NA	NA	NA	26410604	26364979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26410317
Isoform_162180_5	chr7	-	2092	10	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24696	-254	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	17.7332776384533	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATTCATGTGTGTTTT	NA	False	NA	-1	True	CATAAA	-37	NA	26410558	26364905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26410317
Isoform_162182_4	chr7	-	2203	11	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24734	-257	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	22.2216111027081	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATATTCATGTGTGT	NA	False	NA	-4	True	CATAAA	-34	NA	26410596	26364908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26390877_26390954_26410317
Isoform_162195_135	chr7	-	2084	6	FSM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	2	-330	2	0	multi-exon	FALSE	canonical	3	45	junction_5	218.816452763498	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26865836	26858082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26865740
Isoform_162196_29	chr7	-	2118	6	FSM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	-32	-330	-32	0	multi-exon	FALSE	canonical	3	45	junction_5	218.816452763498	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26865870	26858082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26865740
Isoform_162198_1841	chr7	-	2060	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	47	0	47	0	multi-exon	FALSE	canonical	3	451	junction_5	57.8840219749803	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26866180	26858082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
Isoform_162199_28	chr7	-	2793	12	Fusion	ENSMUSG00000053291.16_ENSMUSG00000058709.12	novel	2107	6	NA	NA	-2	0	multi-exon	FALSE	canonical	2	7	junction_5	201.262995576509	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26878315	26858082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
Isoform_162206_24	chr7	-	1923	5	NIC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	47	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	218.662268121411	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26866180	26858082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_26858637_26858948_26859017_26859712_26859833_26864044_26865154_26866108
Isoform_162207_597	chr7	-	1171	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	21	0	1	0	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26878300	26867848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
Isoform_162208_33	chr7	-	1213	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	-22	1	-22	-1	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	-2	True	CATAAA	-18	NA	26878343	26867849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
Isoform_162210_15	chr7	-	1101	7	NIC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	262.193312907353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26878311	26867848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26878151
Isoform_162211_21	chr7	-	1434	7	FSM	ENSMUSG00000053291.16	ENSMUST00000134462.8	1372	7	-60	-2	1	-1	multi-exon	FALSE	canonical	3	670	junction_1	25.5451669705946	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	-2	True	CATAAA	-18	NA	26878300	26867849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875664_26878151
Isoform_162213_50	chr7	-	570	4	FSM	ENSMUSG00000089661.10	ENSMUST00000121848.2	572	4	0	2	0	-2	multi-exon	FALSE	canonical	3	138	junction_1	9.2736184954957	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTTGTCTCTTTGGTT	NA	False	NA	-4	True	AATACA	-14	NA	26880582	26879170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26879260_26879593_26879705_26880124_26880259_26880346
Isoform_162219_385	chr7	-	1265	6	FSM	ENSMUSG00000061479.16	ENSMUST00000163311.9	1288	6	24	-1	24	1	multi-exon	FALSE	canonical	3	2141	junction_5	100.882902416614	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	-7	True	ATTAAA	-27	NA	26895161	26886430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868
Isoform_162225_2838	chr7	-	1239	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	127	-1	9	1	multi-exon	FALSE	canonical	3	1453	junction_6	315.533102683203	2838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	-7	True	ATTAAA	-27	NA	26895569	26886430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
Isoform_162226_52	chr7	-	1353	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	13	-1	13	1	multi-exon	FALSE	canonical	3	1453	junction_6	315.533102683203	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	-7	True	ATTAAA	-27	NA	26895683	26886430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
Isoform_162229_996	chr7	-	1235	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	100	1	8	-1	multi-exon	FALSE	canonical	3	597	junction_6	627.600567417065	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTGTCTGCTTTA	NA	False	NA	-9	True	ATTAAA	-25	NA	26895570	26886432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
Isoform_162234_161	chr7	-	3263	7	FSM	ENSMUSG00000003752.10	ENSMUST00000003850.8	3247	7	-23	7	10	-7	multi-exon	FALSE	canonical	3	37	junction_2	5.28099317258495	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAACATTGTGGGTATT	NA	False	NA	-9	True	AATAAA	-8	NA	26928076	26906603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_26907870_26911736_26911809_26912384_26912487_26913800_26914006_26916376_26916591_26919024_26919128_26926775
Isoform_162264_278	chr7	-	5075	30	FSM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	41	2	-9	0	multi-exon	FALSE	canonical	3	195	junction_24	119.840530186521	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27033047	27004566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
Isoform_162267_24	chr7	-	5362	33	FSM	ENSMUSG00000040488.19	ENSMUST00000038618.13	5386	33	19	5	19	-1	multi-exon	FALSE	canonical	3	26	junction_32	158.898146917294	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27037098	27004565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
Isoform_162269_10	chr7	-	5377	33	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1331	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_32	159.645102003632	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27035786	27004564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27035526
Isoform_162270_18	chr7	-	4135	23	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5281	0	intron_retention	FALSE	canonical	3	305	junction_13	106.662865806938	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027757	27004566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
Isoform_162273_10	chr7	-	5474	29	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	-9	0	intron_retention	FALSE	canonical	3	195	junction_23	121.224508155534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27033047	27004566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
Isoform_162278_26	chr7	-	2076	9	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-574	-1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_8	184.947289788199	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27010677	27004565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27010313
Isoform_162281_11	chr7	-	4751	29	FSM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	-44	19	6	-19	multi-exon	FALSE	canonical	3	195	junction_23	117.369222706702	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGATCAGGAACCTCCA	NA	False	NA	NA	False	AATAAA	-16	NA	27033082	27005441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
Isoform_162283_48	chr7	-	2302	18	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	81.6590938748205	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTATAGTCTTGGT	NA	False	NA	-31	True	AATAAA	-14	NA	27055394	27041560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27041970_27042070_27042183_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
Isoform_162289_741	chr7	-	2309	18	FSM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	50	-1	-15	1	multi-exon	FALSE	canonical	3	272	junction_5	29.8825845289775	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATAGTCTTGGTTTGT	NA	False	NA	-27	True	AATAAA	-18	NA	27055394	27041556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
Isoform_162292_23	chr7	-	2468	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	13	1	intron_retention	FALSE	canonical	3	272	junction_5	30.165623543199	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTATAGTCTTGGT	NA	False	NA	-31	True	AATAAA	-14	NA	27055431	27041560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27055052_27055295
Isoform_162295_40	chr7	-	2139	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	85.4033627850801	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATAGTCTTGGTTTGTTC	NA	False	NA	-25	True	AATAAA	-20	NA	27055393	27041554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
Isoform_162297_17	chr7	-	2787	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-15	1	intron_retention	FALSE	canonical	3	272	junction_4	30.5955853637416	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTATAGTCTTGGT	NA	False	NA	-31	True	AATAAA	-14	NA	27055394	27041560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27041970_27042070_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
Isoform_162298_4	chr7	-	1159	2	ISM	ENSMUSG00000011751.17	ENSMUST00000108362.8	4861	18	34671	2	34671	2	3prime_fragment	FALSE	canonical	3	38	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGCTGGTTTGTTCGTG	NA	False	NA	-2	True	AATAAA	-18	NA	27059260	27055809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_27056876_27059167
Isoform_162300_11	chr7	-	4781	19	FSM	ENSMUSG00000011751.17	ENSMUST00000108363.8	4724	19	-57	0	-57	0	multi-exon	FALSE	canonical	2	8	junction_18	8.28150549920323	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27096035	27055807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27095913
Isoform_162302_4	chr7	-	2523	4	ISM	ENSMUSG00000011751.17	ENSMUST00000011895.14	8747	36	37627	45652	-12419	32166	internal_fragment	TRUE	canonical	2	5	junction_3	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGACACACATC	NA	False	NA	NA	False	NA	NA	NA	27108397	27101459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_27102364_27103592_27104344_27106535_27106674_27107667
Isoform_162312_872	chr7	-	2106	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	171	5	-25	-5	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTGGTATGAGATGGT	NA	False	NA	-4	True	AGTAAA	-26	NA	27252466	27231429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
Isoform_162313_21	chr7	-	2255	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	22	5	-6	-5	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTGGTATGAGATGGT	NA	False	NA	-4	True	AGTAAA	-26	NA	27252615	27231429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
Isoform_162316_46	chr7	-	2129	14	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-25	-5	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	126.954541554455	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTGGTATGAGATGGT	NA	False	NA	-4	True	AGTAAA	-26	NA	27252466	27231429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244711_27252422
Isoform_162318_74	chr7	-	2029	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-23	-5	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	130.304211367093	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTGGTATGAGATGGT	NA	False	NA	-4	True	AGTAAA	-26	NA	27252464	27231429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27252422
Isoform_162321_18	chr7	-	3676	10	FSM	ENSMUSG00000040390.14	ENSMUST00000036453.14	3682	10	5	1	5	-1	multi-exon	FALSE	canonical	0	0	junction_3	25.4209012865835	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTGTGTGTGCGTC	NA	False	NA	-1	True	ATTAAA	-22	NA	27374014	27355800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27356412_27357276_27357958_27358254_27358368_27358445_27358600_27360959_27361077_27362649_27362897_27363822_27363999_27364374_27364524_27367773_27367955_27372767
Isoform_162322_7	chr7	-	2033	4	ISM	ENSMUSG00000040390.14	ENSMUST00000108341.2	3403	11	-45	7508	-45	8	5prime_fragment	FALSE	canonical	3	11	junction_2	33.0891052899423	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAACAGACT	NA	False	NA	NA	False	ATTAAA	-10	NA	27374068	27363596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_27363999_27364374_27364524_27367773_27367955_27372767
Isoform_162324_13	chr7	-	1833	3	NIC	ENSMUSG00000040390.14	novel	3682	10	NA	NA	2	8	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	40.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAACAGACT	NA	False	NA	NA	False	ATTAAA	-10	NA	27374017	27363596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27363999_27367773_27367955_27372767
Isoform_162325_69	chr7	-	1634	2	FSM	ENSMUSG00000040390.14	ENSMUST00000138243.2	1621	2	-12	-1	1	1	multi-exon	FALSE	canonical	3	84	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGCGTAGTCATTGAA	NA	False	NA	1	True	ACTAAA	-18	NA	27374018	27367571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27367955_27372767
Isoform_162326_3	chr7	-	2857	2	FSM	ENSMUSG00000040390.14	ENSMUST00000138243.2	1621	2	-42	-1194	-25	1194	multi-exon	FALSE	canonical	3	84	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	27374048	27366378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27367955_27372767
Isoform_162331_3	chr7	-	4034	5	NIC	ENSMUSG00000070709.13	novel	5158	4	NA	NA	-16	-1297	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	17.9913173503221	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGAATGGTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	27628901	27608113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27611687_27620121_27620221_27625708_27625836_27626825_27626879_27628719
Isoform_162333_6	chr7	-	4006	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	-35	-31	-11	31	multi-exon	FALSE	canonical	3	18	junction_4	22.29798197147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAATCCTATTATTTGT	NA	False	NA	NA	False	AGTAAA	-20	NA	27678607	27660754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
Isoform_162336_8	chr7	-	520	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	-13	-2098	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCAAACAGAGCATAAAGC	NA	False	NA	NA	False	AATAAA	-6	NA	27678609	27664230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
Isoform_162337_3	chr7	-	4577	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	2	627	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTCTGAGTGGGCA	NA	False	NA	NA	False	NA	NA	NA	27678594	27660158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
Isoform_162339_3	chr7	-	6088	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	-14	-104	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATCGAAATAATGCAT	NA	False	NA	NA	False	AATAAA	-20	NA	27678610	27658663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
Isoform_162343_44	chr7	-	3989	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-41	2215	-41	1643	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAATTGTGAGTCCATT	NA	False	NA	-10	True	AATAAA	-18	NA	27713581	27686493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
Isoform_162346_6	chr7	-	6608	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-68	-377	-68	377	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTCATAGCAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	27713608	27683901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
Isoform_162349_108	chr7	-	3985	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1644	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	28.6454184818445	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713581	27686492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713445
Isoform_162350_8	chr7	-	4045	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-101	1644	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	28.6454184818445	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713641	27686492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713445
Isoform_162354_7	chr7	-	3869	5	NIC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-40	1639	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	64.0722248716244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTTGAATTGTGAGTC	NA	False	NA	-14	True	AATAAA	-14	NA	27713580	27686497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27713440
Isoform_162357_12	chr7	-	4010	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-67	1478	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	46.6491038380041	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGGCCTCTACAGTGT	NA	False	NA	-4	True	AATAAA	-36	NA	27713607	27686658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713440
Isoform_162358_19	chr7	-	4144	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-40	1639	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	46.6491038380041	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTTGAATTGTGAGTC	NA	False	NA	-14	True	AATAAA	-14	NA	27713580	27686497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713440
Isoform_162360_40	chr7	-	4150	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1649	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	44.8578000154067	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGAGTCCATTAAATAT	NA	False	NA	-4	True	AATAAA	-24	NA	27713581	27686487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713445
Isoform_162368_2258	chr7	-	1374	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	66	0	13	0	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	2258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749460	27741131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
Isoform_162373_45	chr7	-	1536	10	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2113	junction_4	111.139329750021	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTCTTAGGTGTTTAA	NA	False	NA	-5	True	AATAAA	-23	NA	27749481	27741132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27741346_27741525_27741582_27741763_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
Isoform_162380_1177	chr7	-	1498	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	17	0	1	0	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGTGTGTGGCTCTGT	2673	False	NA	-1	True	NA	NA	NA	28011480	28004940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
Isoform_162381_1323	chr7	-	1181	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	27	307	-8	1	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGTGTCCAGAGTCCA	2683	False	NA	-1	True	AATAAA	-20	NA	28011470	28005247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
Isoform_1624_6	chr10	-	5805	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-54	0	-54	0	multi-exon	TRUE	canonical	3	61	junction_24	17.9698339045066	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12424677	12257933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
Isoform_16240_420	chr11	-	1956	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	5	958	5	-13	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121838	99100830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
Isoform_16241_260	chr11	-	2353	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	564	2	-7	-2	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCAGTGTTTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	99121279	99099874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
Isoform_16242_109	chr11	-	2829	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	88	2	88	-2	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCAGTGTTTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	99121755	99099874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
Isoform_162422_48	chr7	-	3758	29	FSM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	-2	-1	-2	1	multi-exon	FALSE	canonical	3	668	junction_13	69.0304945924152	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGTGTACGAAGAGT	NA	False	NA	-14	True	AATAAA	-15	NA	28038133	28014321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776
Isoform_162424_1543	chr7	-	3544	30	FSM	ENSMUSG00000003435.10	ENSMUST00000003527.10	3513	30	-34	3	-7	1	multi-exon	FALSE	canonical	3	628	junction_29	71.450522531579	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGTGTACGAAGAGT	NA	False	NA	-14	True	AATAAA	-15	NA	28038178	28014321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776_28037861_28038119
Isoform_162429_220	chr7	-	3532	29	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_25	152.559502443192	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGTGTACGAAGAGT	NA	False	NA	-14	True	AATAAA	-15	NA	28038178	28014321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28030004_28030071_28030794_28030955_28037776_28037861_28038119
Isoform_16243_635	chr11	-	1413	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	548	958	-23	-13	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121295	99100830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
Isoform_162436_5	chr7	-	5228	20	NIC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	-78	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	7.20572256426309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGCCTTTCTTG	NA	False	NA	-2	True	NA	NA	NA	28072102	28059029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28060687_28061232_28062134_28062250_28062425_28063722_28063740_28063895_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070302_28070468_28070539_28070671_28071284
Isoform_162437_7	chr7	-	4969	19	FSM	ENSMUSG00000037552.18	ENSMUST00000119990.8	4880	19	-88	-1	-5	0	multi-exon	FALSE	canonical	1	3	junction_17	6.29643246040129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTTGCCTTTCTTGA	NA	False	NA	-1	True	NA	NA	NA	28072007	28059028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28060687_28061232_28062134_28062250_28062425_28063722_28063740_28063895_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070539_28070671_28071284
Isoform_162438_5	chr7	-	5060	19	FSM	ENSMUSG00000037552.18	ENSMUST00000119990.8	4880	19	-178	-2	-73	1	multi-exon	TRUE	canonical	1	3	junction_17	6.29643246040129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	0	True	NA	NA	NA	28072097	28059027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28060687_28061232_28062134_28062250_28062425_28063722_28063740_28063895_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070539_28070671_28071284
Isoform_162439_14	chr7	-	5038	19	FSM	ENSMUSG00000037552.18	ENSMUST00000094644.11	4623	19	-416	1	-50	0	multi-exon	FALSE	canonical	2	5	junction_17	6.01156293229048	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGCCTTTCTTG	NA	False	NA	-2	True	NA	NA	NA	28072074	28059029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28060687_28061232_28062134_28062250_28062425_28063722_28063740_28063895_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070539_28070671_28071284
Isoform_162441_57	chr7	-	1793	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	998	-1	0	1	multi-exon	FALSE	canonical	3	36	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAATTTGTCTTTTTCG	6671	False	NA	-1	True	AATAAA	-19	NA	28078680	28076207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28077919_28078598
Isoform_162443_29	chr7	-	2160	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	38	-917	38	917	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCCTTTTGTTTCGT	NA	False	NA	NA	False	NA	NA	NA	28092095	28084653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
Isoform_162444_329	chr7	-	650	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	38	593	38	-593	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGGTGGTTCCTGTTGC	NA	False	NA	-22	True	AATGAA	-16	NA	28092095	28086163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
Isoform_162447_42	chr7	-	755	5	NNC	ENSMUSG00000003444.9	novel	1281	4	NA	NA	38	-593	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	249.415692168717	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGGTGGTTCCTGTTGC	NA	False	NA	-22	True	AATGAA	-16	NA	28092095	28086163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_28086450_28086623_28086729_28090236_28090322_28090514_28090574_28091875
Isoform_162456_95	chr7	-	4467	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	-103	27	-67	0	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6533	False	NA	-35	True	NA	NA	NA	28135719	28098973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
Isoform_162459_80	chr7	-	4493	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	-102	0	-66	0	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAAGACTCTTCATTTT	6534	False	NA	-8	True	NA	NA	NA	28135718	28098946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
Isoform_162467_229	chr7	-	4696	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-66	-3	intron_retention	FALSE	canonical	3	429	junction_11	37.2212504841429	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCAAAAAGACTCTTCAT	6534	False	NA	-11	True	NA	NA	NA	28135718	28098949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
Isoform_162471_12	chr7	-	1102	3	ISM	ENSMUSG00000109336.2	ENSMUST00000207766.2	2336	13	-55	12327	-55	-6490	5prime_fragment	FALSE	canonical	3	429	junction_2	55	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTCTTGGCCTCAACTT	6545	False	NA	NA	False	AATAAA	-42	NA	28135707	28113212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_28113768_28122860_28123263_28135562
Isoform_162473_11	chr7	-	1352	6	FSM	ENSMUSG00000047586.5	ENSMUST00000239002.2	1531	6	177	2	177	-2	multi-exon	FALSE	canonical	3	10	junction_1	2.92574776766556	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGCTCAGAGGCTGG	NA	False	NA	NA	False	AATAAA	-23	NA	28246502	28243022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28243698_28243846_28243986_28244663_28244760_28245580_28245633_28245714_28245778_28246175
Isoform_162490_312	chr7	-	3006	11	NIC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	113	junction_9	227.845759231986	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTATGTGTGT	4628	False	NA	-6	True	ATTAAA	-18	NA	28297578	28258246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28269596_28269739_28297459
Isoform_162494_1753	chr7	-	2853	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	44	2	14	0	multi-exon	TRUE	canonical	3	622	junction_9	35.4843036069349	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	4640	False	NA	-5	True	ATTAAA	-19	NA	28297566	28258245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
Isoform_162495_123	chr7	-	2911	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	-16	4	-16	-2	multi-exon	FALSE	canonical	3	622	junction_9	35.4843036069349	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTGTGTATGTGTG	4580	False	NA	-7	True	ATTAAA	-17	NA	28297626	28258247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
Isoform_16250_27	chr11	-	1349	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-10	-12	combination_of_known_splicesites	FALSE	canonical	3	18	junction_9	208.072874223562	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAATGGTGTTATGTGG	NA	False	NA	-13	True	AATGAA	-24	NA	99121282	99100829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99121227
Isoform_162504_169	chr7	-	879	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	4	0	4	0	multi-exon	FALSE	canonical	3	939	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1698	False	NA	-5	True	AATAAA	-24	NA	28441191	28439065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28439665_28440911
Isoform_162506_378	chr7	-	707	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	16	-1	16	0	multi-exon	FALSE	canonical	3	503	junction_2	218	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1660	False	NA	-5	True	AATAAA	-24	NA	28441229	28439065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28439665_28440911_28440980_28441189
Isoform_162508_401	chr7	-	1172	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	60	11	60	-11	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGACTGACCCTGCCTT	NA	False	NA	-10	True	AATAAA	-22	NA	28465879	28458467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
Isoform_162510_272	chr7	-	1217	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	14	12	14	-12	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGACTGACCCTGCCT	NA	False	NA	-11	True	AATAAA	-21	NA	28465925	28458468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
Isoform_162511_17	chr7	-	1375	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	-144	12	-18	-12	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGACTGACCCTGCCT	NA	False	NA	-11	True	AATAAA	-21	NA	28466083	28458468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
Isoform_16253_27	chr11	-	1312	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-27	-13	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	198.840962568234	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121299	99100830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119100_99119145_99119322_99119375_99121227
Isoform_162564_808	chr7	-	3823	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	46	-8	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661719	28592680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
Isoform_162565_71	chr7	-	3869	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGACTCTGGTGTCATC	NA	False	NA	-8	True	AATAAA	-17	NA	28661764	28592679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
Isoform_162586_2034	chr7	-	3823	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	46	8	46	-8	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661719	28592680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
Isoform_162592_60	chr7	-	3904	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	-35	8	-35	-8	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661800	28592680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
Isoform_1626_16	chr10	-	4934	25	FSM	ENSMUSG00000019820.12	ENSMUST00000217994.2	3161	25	221	-1994	221	-4	multi-exon	FALSE	canonical	3	18	junction_24	24.236536927173	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGACTTTGATGTTTGG	NA	False	NA	-7	True	AATAAA	-15	NA	12490354	12257937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12490234
Isoform_162607_51	chr7	-	882	8	NIC	ENSMUSG00000053565.11	novel	774	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_6	1203.94528318274	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681223	28670797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679743_28679968_28681098
Isoform_162608_2322	chr7	-	758	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	16	0	7	0	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	2322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	False	NA	-4	True	AATAAA	-17	NA	28681223	28670796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
Isoform_162609_181	chr7	-	830	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	-56	0	-6	0	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	False	NA	-4	True	AATAAA	-17	NA	28681295	28670796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
Isoform_16261_25	chr11	-	545	2	ISM	ENSMUSG00000019761.11	ENSMUST00000103131.5	2094	8	3262	10	-5	3	3prime_fragment	FALSE	canonical	3	82	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATAAAAATCTGTCAGAA	8334	False	NA	NA	False	AATAAA	-28	NA	99276928	99276089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_99276463_99276756
Isoform_162610_49	chr7	-	877	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	-104	1	-54	0	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681343	28670797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
Isoform_162615_8	chr7	-	1337	7	FSM	ENSMUSG00000030590.16	ENSMUST00000123545.8	1359	7	22	0	2	0	multi-exon	FALSE	canonical	3	257	junction_3	25.8698666405531	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855606	28851936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309
Isoform_162617_232	chr7	-	1280	8	FSM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	11	2	11	0	multi-exon	FALSE	canonical	3	257	junction_3	23.9565934002925	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855648	28851936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
Isoform_162618_12	chr7	-	1193	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	2	0	intron_retention	TRUE	canonical	3	18	junction_6	105.086868827651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855606	28851934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855455
Isoform_162619_9	chr7	-	1347	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	257	junction_3	24.5877114745467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855640	28851936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855456_28855554
Isoform_162620_13	chr7	-	1558	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	257	junction_3	25.0493956458479	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855607	28851934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28855235_28855309_28855456_28855554
Isoform_162621_15	chr7	-	1147	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	35	junction_2	99.9762471790175	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855630	28851934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28852273_28852746_28852915_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
Isoform_162624_49	chr7	-	2199	7	FSM	ENSMUSG00000030590.16	ENSMUST00000147561.8	2169	7	-30	0	-10	0	multi-exon	FALSE	canonical	3	257	junction_2	24.4386988196999	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855638	28851936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
Isoform_162626_14	chr7	-	2262	6	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	257	junction_2	24.6121921006643	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855624	28851934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099_28855456_28855554
Isoform_162627_14	chr7	-	2513	6	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	257	junction_2	26.1717404847289	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855635	28851936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28855235_28855309_28855456_28855554
Isoform_162629_23	chr7	-	2577	5	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	257	junction_2	27.2213151776324	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855624	28851936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28855456_28855554
Isoform_162636_965	chr7	-	1004	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	45	342	-26	-1	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGCCCGAGTCTCCCCAG	NA	False	NA	-13	True	AATAAA	-17	NA	28879932	28873954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
Isoform_162637_727	chr7	-	1326	8	NNC	ENSMUSG00000030591.18	novel	1391	7	NA	NA	-31	-5	at_least_one_novel_splicesite	FALSE	non_canonical	3	425	junction_1	479.284798806875	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATATGAGTGTATCCA	NA	False	NA	-15	True	AATAAA	-10	NA	28879937	28873617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_28873786_28873805_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
Isoform_16264_23	chr11	-	1380	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	192	4	192	-4	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGATACCTTGCTTATT	9791	False	NA	NA	False	AATAAA	-17	NA	100036754	100031639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
Isoform_16265_3	chr11	-	1469	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	96	11	96	-11	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGGAAAAAGGATACCTT	9695	False	NA	NA	False	AATAAA	-10	NA	100036850	100031646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
Isoform_162651_8	chr7	-	4182	3	FSM	ENSMUSG00000046410.11	ENSMUST00000085818.6	4084	3	-98	0	-98	0	multi-exon	FALSE	canonical	1	1	junction_2	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTACCTTGTGTTTTCGT	NA	False	NA	NA	False	NA	NA	NA	28932038	28921350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28924685_28924896_28925293_28931586
Isoform_162652_19	chr7	-	426	4	FSM	ENSMUSG00000030587.6	ENSMUST00000032808.6	1466	4	79	961	-49	50	multi-exon	FALSE	canonical	3	53	junction_3	7.36357401145817	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGGTTTATTGTTGCGGG	1862	False	NA	-8	True	NA	NA	NA	28947812	28946946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28947160_28947321_28947391_28947552_28947666_28947781
Isoform_162654_26	chr7	-	1013	7	FSM	ENSMUSG00000074227.13	ENSMUST00000207601.2	1304	7	265	26	263	-8	multi-exon	FALSE	canonical	0	0	junction_2	472.77185007382	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	732	False	NA	-24	True	AATAAA	-13	NA	28981072	28955773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959481_28959555_28959795_28959856_28980936
Isoform_162658_59	chr7	-	1132	7	FSM	ENSMUSG00000074227.13	ENSMUST00000098604.12	1384	7	242	10	240	-10	multi-exon	FALSE	canonical	0	0	junction_2	452.801066204084	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAACTTACTATGT	709	False	NA	-26	True	AATAAA	-11	NA	28981095	28955775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
Isoform_162659_21	chr7	-	1452	7	FSM	ENSMUSG00000074227.13	ENSMUST00000098604.12	1384	7	-76	8	-76	-8	multi-exon	FALSE	canonical	0	0	junction_2	452.801066204084	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	391	False	NA	-24	True	AATAAA	-13	NA	28981413	28955773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
Isoform_162661_392	chr7	-	940	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	262	9	262	-9	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	731	False	NA	-25	True	AATAAA	-12	NA	28981073	28955774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
Isoform_162662_306	chr7	-	1222	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	-19	8	-17	-8	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	450	False	NA	-24	True	AATAAA	-13	NA	28981354	28955773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
Isoform_162663_173	chr7	-	1252	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	-49	8	-47	-8	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	420	False	NA	-24	True	AATAAA	-13	NA	28981384	28955773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
Isoform_162664_65	chr7	-	1354	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	-151	8	-149	-8	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	318	False	NA	-24	True	AATAAA	-13	NA	28981486	28955773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
Isoform_16267_58	chr11	-	1499	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	0	52	0	-52	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGTGGCCTTTGTT	NA	False	NA	-4	True	ATTAAA	-15	NA	100151855	100147094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
Isoform_162673_34	chr7	-	2286	5	NIC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	255	0	intron_retention	FALSE	canonical	0	0	junction_1	445.694612374886	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	724	False	NA	-16	True	AATAAA	-21	NA	28981080	28955765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
Isoform_162676_14	chr7	-	2993	8	NIC	ENSMUSG00000030583.17	novel	2660	10	NA	NA	-36	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	14.6844357420101	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	985	False	NA	-4	True	AATAAA	-14	NA	29041329	29019799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29041243
Isoform_162678_15	chr7	-	7565	22	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	3	33	junction_11	9.24962461700774	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	NA	False	NA	-7	True	AATAAA	-11	NA	29217976	29019802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
Isoform_162679_6	chr7	-	3081	9	NIC	ENSMUSG00000030583.17	novel	4321	14	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	24.1631822200636	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGGTGTGTTCTCCT	994	False	NA	-6	True	AATAAA	-12	NA	29041320	29019801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031372_29031469_29031649_29031816_29038380_29038603_29041243
Isoform_162681_6	chr7	-	2992	8	NIC	ENSMUSG00000030583.17	novel	3697	10	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	17.8004815344176	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	986	False	NA	-7	True	AATAAA	-11	NA	29041328	29019802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29041243
Isoform_162683_7	chr7	-	3003	5	NIC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	6	4	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	18.7082869338697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGACTTTGTGGTGTTCG	3429	False	NA	0	True	AATAAA	-25	NA	29553088	29543356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552701
Isoform_162684_35	chr7	-	2779	5	FSM	ENSMUSG00000050855.17	ENSMUST00000085792.5	2764	5	-15	0	6	0	multi-exon	FALSE	canonical	3	25	junction_4	10.6624340560681	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3429	False	NA	-4	True	AATAAA	-21	NA	29553088	29543360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552921
Isoform_162686_38	chr7	-	2849	5	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	9.83298021964857	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3430	False	NA	-4	True	AATAAA	-21	NA	29553087	29543360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552850
Isoform_162688_3	chr7	-	3485	5	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	20	-9	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	9.83298021964857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAATATAAATTGGTG	3471	False	NA	NA	False	ATTAAA	-31	NA	29553046	29542683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552850
Isoform_162689_11	chr7	-	3053	4	FSM	ENSMUSG00000050855.17	ENSMUST00000145098.2	3712	4	-23	682	5	4	multi-exon	FALSE	canonical	3	25	junction_3	12.2836838484589	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGACTTTGTGGTGTTCG	3428	False	NA	0	True	AATAAA	-25	NA	29553089	29543356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29545674_29545893_29546386_29550366_29550443_29552921
Isoform_162690_19	chr7	-	3115	4	NNC	ENSMUSG00000050855.17	novel	3712	4	NA	NA	8	-2	intron_retention	FALSE	canonical	3	27	junction_3	11.3431330181157	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGTGTGACTTTGTGG	3431	False	NA	-6	True	AATAAA	-19	NA	29553086	29543362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29545674_29545893_29546386_29550366_29550443_29552850
Isoform_162691_20	chr7	-	3405	5	NIC	ENSMUSG00000062040.15	novel	3150	5	NA	NA	6	-106	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	18.1245689603919	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAAGTGTACCTGGCC	NA	False	NA	NA	False	AGTAAA	-18	NA	29605523	29592863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605478
Isoform_162696_25	chr7	-	3680	5	NIC	ENSMUSG00000062040.15	novel	3845	5	NA	NA	1	-108	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	15.9902313929474	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAAAGTGTACCTGG	NA	False	NA	NA	False	AGTAAA	-16	NA	29605956	29592865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605634
Isoform_162698_3	chr7	-	3210	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	2	-62	2	61	multi-exon	FALSE	canonical	2	2	junction_4	19.4084388862165	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGTCAGATCTAACAT	NA	False	NA	62	True	AATAGA	-19	NA	29605527	29593078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
Isoform_162699_3	chr7	-	3112	5	NNC	ENSMUSG00000062040.15	novel	3150	5	NA	NA	5	-12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	20.8251650653722	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGACAGGGACCATCTT	NA	False	NA	-12	True	AATATA	-4	NA	29605524	29593152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603329_29603469_29605478
Isoform_1627_5	chr10	-	4917	25	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	28503	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_24	26.7285414969758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTTTGATGTTTGGC	NA	False	NA	-6	True	AATAAA	-16	NA	12462072	12257936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12461970
Isoform_16270_6	chr11	-	1628	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	-130	53	-130	-53	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAACTGTGGCCTTTGT	NA	False	NA	-5	True	ATTAAA	-14	NA	100151985	100147095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
Isoform_162702_6	chr7	-	3366	5	ISM	ENSMUSG00000059975.16	ENSMUST00000108212.8	2060	7	-17	2277	-17	-301	5prime_fragment	FALSE	canonical	2	4	junction_4	20.9568008054665	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTCTATTTTCTTTTA	5361	False	NA	-8	True	AATAAA	-14	NA	29643197	29632516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642966_29643056
Isoform_162703_5	chr7	-	3703	5	ISM	ENSMUSG00000059975.16	ENSMUST00000108212.8	2060	7	-51	1974	-51	2	5prime_fragment	FALSE	canonical	2	4	junction_4	20.9568008054665	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATATTGCTCGTGGTC	5327	False	NA	NA	False	AATAAA	-18	NA	29643231	29632213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642966_29643056
Isoform_162707_7	chr7	-	3707	5	NIC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	-51	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	18.3626659284539	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGATATTGCTCGTGGT	5327	False	NA	NA	False	AATAAA	-17	NA	29643231	29632214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29643056
Isoform_162708_3	chr7	-	3798	5	NIC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	-17	126	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	18.3626659284539	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCAGTCTGCTCATCAA	5361	False	NA	NA	False	AATAAA	-17	NA	29643197	29632089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29643056
Isoform_16271_19	chr11	-	1023	5	FSM	ENSMUSG00000053654.8	ENSMUST00000107406.2	1062	5	34	5	34	0	multi-exon	FALSE	canonical	3	72	junction_1	11.3688170009021	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100156770	100153712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425
Isoform_162715_6	chr7	-	3918	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	15.0119952038362	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGATATTGCTCGTGGT	NA	False	NA	NA	False	AATAAA	-17	NA	29653488	29632214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
Isoform_162719_3	chr7	-	2765	6	NNC	ENSMUSG00000053985.11	novel	3411	5	NA	NA	13	-155	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	6.15142259969188	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCTGCATTTATAAACC	NA	False	NA	NA	False	AATAAA	-21	NA	29750785	29736470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864_29749926_29750769
Isoform_162720_7	chr7	-	2776	6	NIC	ENSMUSG00000053985.11	novel	3411	5	NA	NA	4	-156	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	3.65513337649941	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCTGCATTTATAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	29750794	29736471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864_29749929_29750769
Isoform_162723_22	chr7	-	2162	7	FSM	ENSMUSG00000098022.8	ENSMUST00000080834.15	2181	7	19	0	19	0	multi-exon	FALSE	canonical	2	6	junction_6	14.682756326158	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCCACTGTGTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	29772306	29755461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29772205
Isoform_162724_4	chr7	-	2381	9	FSM	ENSMUSG00000058447.9	ENSMUST00000182746.2	2374	9	-10	3	-10	-3	multi-exon	FALSE	canonical	3	5	junction_6	43.1955943934101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCCACTGTGTCC	9880	False	NA	NA	False	ATTAAA	-15	NA	29789845	29755461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29780515_29780643_29786524_29786585_29789712
Isoform_162725_11	chr7	-	2067	6	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	15.0332963783729	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATATAATGTGTTCCACT	NA	False	NA	NA	False	ATTAAA	-9	NA	29772328	29755467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29772205
Isoform_162726_7	chr7	-	2273	8	NIC	ENSMUSG00000058447.9	novel	2374	9	NA	NA	-19	-9	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	44.1093261460796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATATAATGTGTTCCACT	9871	False	NA	NA	False	ATTAAA	-9	NA	29789854	29755467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29780515_29780643_29786524_29786585_29789712
Isoform_162727_5	chr7	-	2356	8	NIC	ENSMUSG00000058447.9	novel	2374	9	NA	NA	-102	-9	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	44.1093261460796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATATAATGTGTTCCACT	9938	False	NA	NA	False	ATTAAA	-9	NA	29789937	29755467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29780515_29780643_29786524_29786585_29789712
Isoform_162728_3	chr7	-	1878	5	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	22	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	15.8804124631572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATATAATGTGTTCCACT	NA	False	NA	NA	False	ATTAAA	-9	NA	29772303	29755467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29772205
Isoform_162729_3	chr7	-	2153	7	NNC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	16.4189930669738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATGTGTTCCACTGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	29772296	29755463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29756945_29761653_29761747_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29772205
Isoform_162730_56	chr7	-	1678	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	30	1	30	-1	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTGTGTGGCAGTGTA	9953	False	NA	1	True	AAAACA	-21	NA	29789922	29776762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
Isoform_162732_4	chr7	-	1936	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	-2	-225	-2	225	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTGCTGTATTCTTA	9921	False	NA	NA	False	NA	NA	NA	29789954	29776536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
Isoform_162733_4	chr7	-	1861	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	75	-227	11	227	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGCTGTATTCTTAAT	9998	False	NA	NA	False	NA	NA	NA	29789877	29776534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
Isoform_162734_50	chr7	-	2804	2	FSM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	5	-780	5	780	multi-exon	FALSE	canonical	3	29	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATCCTTCTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	29869147	29859913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29862654_29869083
Isoform_162736_27	chr7	-	2951	2	NIC	ENSMUSG00000037029.9	novel	585	3	NA	NA	4	781	intron_retention	FALSE	canonical	3	14	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTAAATCCTTCTTTAT	NA	False	NA	0	True	ATTAAA	-18	NA	29869148	29859912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29862799_29869083
Isoform_16274_3	chr11	-	1056	6	ISM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	2721	0	-1172	0	3prime_fragment	FALSE	canonical	3	51	junction_5	18.4542677990756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100157976	100153712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760
Isoform_162746_203	chr7	-	1267	9	FSM	ENSMUSG00000001794.14	ENSMUST00000207082.2	1241	9	-30	4	-30	2	multi-exon	FALSE	canonical	3	1474	junction_7	82.1492544092763	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTTGGTTATTTTTT	NA	False	NA	-6	True	NA	NA	NA	29892427	29886364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291
Isoform_162756_895	chr7	-	1439	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	-9	-1	-9	0	multi-exon	FALSE	canonical	3	766	junction_10	279.009032111866	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	NA	False	NA	-8	True	NA	NA	NA	29894482	29886366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
Isoform_162758_33	chr7	-	1518	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	-84	-5	-84	-2	multi-exon	FALSE	canonical	3	766	junction_10	279.009032111866	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGGTTATTTTTTTA	NA	False	NA	-4	True	NA	NA	NA	29894557	29886362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
Isoform_16276_44	chr11	-	1642	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	-100	0	-100	0	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100160797	100153712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
Isoform_162761_22	chr7	-	1653	12	FSM	ENSMUSG00000001794.14	ENSMUST00000001845.13	1600	12	-51	-2	-51	2	multi-exon	FALSE	canonical	3	37	junction_11	486.143841584714	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTTGGTTATTTTTT	8258	False	NA	-6	True	NA	NA	NA	29898287	29886364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430_29894590_29898182
Isoform_162763_48	chr7	-	1227	10	NNC	ENSMUSG00000001794.14	novel	1192	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_9	479.120258622219	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGGTTATTTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	29892527	29886361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892468
Isoform_162771_990	chr7	-	891	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	519	6	519	0	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	990	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTGCAAGTCTCTT	NA	False	NA	-11	True	NA	NA	NA	29931178	29923561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
Isoform_16278_17	chr11	-	1715	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	-176	3	-176	-3	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTTGAATTCATCATT	NA	False	NA	-14	True	AATAAA	-15	NA	100160873	100153715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
Isoform_162787_13	chr7	-	4742	33	FSM	ENSMUSG00000037020.17	ENSMUST00000108190.8	4742	33	-2	2	-2	-2	multi-exon	FALSE	canonical	1	9	junction_7	40.394139716517	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979846	29939564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942458_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_16279_3	chr11	-	2998	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	-1456	0	-1456	0	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100162153	100153712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
Isoform_162790_182	chr7	-	4722	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	1	41	junction_22	30.5222607032556	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCCTGTCTATAAAGC	NA	False	NA	-5	True	AATAAA	-20	NA	29979834	29939563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_162792_12	chr7	-	4655	32	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	1	24	junction_10	39.0660477577263	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_162795_4	chr7	-	4797	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	1	9	junction_7	44.8182091900156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979845	29939565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942458_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_162796_53	chr7	-	4779	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	1	41	junction_22	36.4423774608628	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCCTGTCTATAAAGC	NA	False	NA	-5	True	AATAAA	-20	NA	29979834	29939563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_162798_6	chr7	-	4757	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_3	40.4868685308891	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979826	29939562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29939910_29940002_29940140_29940655_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_162799_5	chr7	-	4698	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	47.2511389838992	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCCTGTCTATAAAGC	NA	False	NA	-5	True	AATAAA	-20	NA	29979834	29939563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29939910_29940002_29940140_29940655_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_16280_8	chr11	-	1290	9	NNC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-1847	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	29.6858552175948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100162544	100153712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235_100160370_100162468
Isoform_162800_7	chr7	-	2583	13	ISM	ENSMUSG00000037020.17	ENSMUST00000108190.8	4742	33	9	14930	9	-5246	5prime_fragment	FALSE	canonical	1	41	junction_2	40.4621736934634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-18	NA	29979835	29954492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_162801_24	chr7	-	3211	3	FSM	ENSMUSG00000036957.9	ENSMUST00000046351.7	2886	3	-327	2	-327	-2	multi-exon	FALSE	canonical	3	10	junction_2	2	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCGGGCTGTTCCTTTG	NA	False	NA	NA	False	AAGAAA	-14	NA	30062524	30054915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30055529_30058808_30060240_30061357
Isoform_162803_14	chr7	-	998	6	ISM	ENSMUSG00000006651.9	ENSMUST00000208792.2	2472	16	8419	-8	-67	2	3prime_fragment	FALSE	canonical	3	430	junction_4	31.3496411462715	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTTTCTGTTGGAGA	NA	False	NA	0	True	AATAAA	-22	NA	30136495	30134404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211
Isoform_162804_17	chr7	-	962	6	ISM	ENSMUSG00000006651.9	ENSMUST00000208792.2	2472	16	8453	-6	-33	0	3prime_fragment	FALSE	canonical	3	430	junction_4	31.3496411462715	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30136461	30134406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211
Isoform_162815_956	chr7	-	2388	17	FSM	ENSMUSG00000006651.9	ENSMUST00000006828.9	2343	17	-45	0	-45	0	multi-exon	TRUE	canonical	3	317	junction_16	59.4064390449386	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30145005	30134406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
Isoform_16282_5	chr11	-	864	6	NNC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	36.8315082504097	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100156814	100153712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100156790
Isoform_162820_5	chr7	-	2135	10	ISM	ENSMUSG00000036915.18	ENSMUST00000045817.14	3352	15	3057	2	2024	-2	3prime_fragment	FALSE	canonical	3	21	junction_5	10.0197336156404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCAAATGTGCTTGTGAA	NA	False	NA	NA	False	AATAAA	-14	NA	30153883	30146962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662
Isoform_162823_13	chr7	-	2904	15	FSM	ENSMUSG00000036915.18	ENSMUST00000045817.14	3352	15	452	-4	452	2	multi-exon	FALSE	canonical	3	10	junction_12	10.266102334521	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGCTTGTGAAAGACCT	NA	False	NA	NA	False	AATAAA	-20	NA	30156488	30146956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222
Isoform_162824_9	chr7	-	4294	21	FSM	ENSMUSG00000036882.8	ENSMUST00000207858.2	4337	21	43	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_17	2.5588083163848	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTGGAGCTAGTGAATG	9075	False	NA	NA	False	AATAAA	-16	NA	30234442	30221650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30223272_30223368_30224014_30225379_30225455_30225538_30225685_30225771_30225926_30226566_30226713_30227704_30227813_30227894_30227978_30228078_30228224_30229140_30229244_30229319_30229473_30229560_30229621_30229700_30229768_30229849_30229928_30230010_30230134_30230948_30231042_30231503_30231642_30231744_30231826_30232184_30232270_30232359_30232458_30234350
Isoform_162826_11	chr7	-	2507	12	FSM	ENSMUSG00000036864.17	ENSMUST00000215288.2	2465	12	-40	-2	-8	2	multi-exon	TRUE	canonical	3	27	junction_11	10.5595517059866	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCAGTTTACTGTTCA	NA	False	NA	-4	True	AATAAA	-18	NA	30251732	30238556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30250182_30250260_30251632
Isoform_162828_8	chr7	-	2423	11	NIC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	7.82304288624318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTTCCAGTTTACTG	NA	False	NA	-8	True	AATAAA	-14	NA	30251729	30238560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30251632
Isoform_162829_7	chr7	-	2430	11	NIC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	16.4805946494658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCAGTTTACTGTTCA	NA	False	NA	-4	True	AATAAA	-18	NA	30251729	30238556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245654_30245727_30245853_30248465_30248634_30249031_30249129_30251632
Isoform_162830_193	chr7	-	992	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	6	0	-1	0	multi-exon	FALSE	canonical	3	222	junction_2	22.8363744933385	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCTCAAGTGCATTTA	4891	False	NA	-6	True	NA	NA	NA	30259065	30254865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
Isoform_162832_32	chr7	-	1099	9	FSM	ENSMUSG00000036845.13	ENSMUST00000108164.8	1312	9	213	0	14	0	multi-exon	FALSE	canonical	3	52	junction_8	74.6976196073208	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGACAAATCTCAAGTGCA	4906	False	NA	-10	True	NA	NA	NA	30259050	30254869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257510_30258866
Isoform_162834_4	chr7	-	1089	8	NIC	ENSMUSG00000036845.13	novel	998	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	235	junction_7	16.9428812334206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCTCAAGTGCATTTA	4881	False	NA	-6	True	NA	NA	NA	30259075	30254865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30255034_30255112_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
Isoform_162835_3	chr4	-	371	1	FSM	ENSMUSG00000056412.7	ENSMUST00000121600.2	306	1	59	-124	59	124	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	6379	False	NA	NA	False	AATAAA	-11	NA	40775505	40775134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_40775100_40775500
Isoform_162837_8	chr7	-	596	4	NIC	ENSMUSG00000036835.8	novel	708	4	NA	NA	-58	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	381.68660792156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGAGTTCTTGGGATC	1349	False	NA	-7	True	AATAAA	-15	NA	30262607	30261291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30261560_30261748_30261854_30262220_30262313_30262476
Isoform_162838_266	chr7	-	647	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	59	2	-58	-2	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGAGTTCTTGGGATC	1349	False	NA	-7	True	AATAAA	-15	NA	30262607	30261291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
Isoform_162839_51	chr7	-	689	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	16	3	16	-3	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTGAGTTCTTGGGAT	1306	False	NA	-8	True	AATAAA	-14	NA	30262650	30261292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
Isoform_16285_83	chr11	-	3632	11	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	47	junction_1	163.083567535175	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2050	False	NA	-2	True	AATAAA	-17	NA	100246911	100238152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
Isoform_162855_23	chr7	-	8480	37	FSM	ENSMUSG00000006307.17	ENSMUST00000006470.14	8469	37	-11	0	-2	0	multi-exon	FALSE	canonical	3	32	junction_36	36.953257094288	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30288153	30268282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
Isoform_162856_3	chr7	-	8491	37	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	37.8523263632648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTGGTCTTTCCGTGC	NA	False	NA	-25	True	AATAAA	-16	NA	30288163	30268284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270267_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
Isoform_162858_58	chr7	-	1868	6	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	21.6277599394852	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298328	30289105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30298204
Isoform_162860_16	chr7	-	965	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	27.8960122598195	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298334	30289105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30298204
Isoform_162862_10	chr7	-	2069	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	42	junction_4	17.5267652463311	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298342	30289105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30291391_30298204
Isoform_162863_3	chr7	-	2194	3	NIC	ENSMUSG00000006310.11	novel	854	4	NA	NA	32	-1	intron_retention	FALSE	canonical	3	42	junction_2	20.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298262	30289106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30289633_30289780_30291391_30298204
Isoform_162864_4	chr7	-	2374	2	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	42	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298293	30289105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30291391_30298204
Isoform_162865_9	chr7	-	742	3	ISM	ENSMUSG00000006313.6	ENSMUST00000006476.6	1421	8	7687	-7	7687	7	3prime_fragment	FALSE	canonical	3	31	junction_1	6.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGTTCTGTTCT	9594	False	NA	-1	True	AATAAA	-17	NA	30304585	30302509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_30303068_30303196_30303281_30304485
Isoform_162866_3	chr7	-	1204	6	NNC	ENSMUSG00000006313.6	novel	1421	8	NA	NA	5029	8	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	12.5698050899765	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGTTCTGTTCTG	6936	False	NA	0	True	AATAAA	-18	NA	30307243	30302508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_30303068_30303196_30303281_30304485_30304666_30306299_30306408_30306555_30306631_30307045
Isoform_162870_2457	chr7	-	463	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	37	118	0	-5	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	2457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCACATTGTGTGTAT	NA	False	NA	-9	True	AATAAA	-13	NA	30325539	30316403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
Isoform_162871_72	chr7	-	514	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	-15	119	-15	-6	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCACATTGTGTGTA	NA	False	NA	-10	True	AATAAA	-12	NA	30325591	30316404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
Isoform_162872_13	chr7	-	514	3	ISM	ENSMUSG00000006311.9	ENSMUST00000108147.3	1048	6	1067	-9	1067	9	3prime_fragment	FALSE	canonical	3	44	junction_1	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCGTGTCTGGTGTCTG	NA	False	NA	NA	False	AATAAA	-27	NA	30334210	30333031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_30333260_30333413_30333527_30334037
Isoform_162878_186	chr7	-	1555	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	-31	2	-31	0	multi-exon	FALSE	canonical	3	345	junction_5	209.790818435889	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3753	False	NA	-14	True	AATAAA	-16	NA	30349600	30340425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
Isoform_162881_453	chr7	-	1516	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	8	2	8	0	multi-exon	TRUE	canonical	3	345	junction_5	209.790818435889	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3792	False	NA	-14	True	AATAAA	-16	NA	30349561	30340425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
Isoform_162884_1211	chr7	-	1603	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	181	0	8	0	multi-exon	FALSE	canonical	3	640	junction_5	133.345925331332	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3792	False	NA	-14	True	AATAAA	-16	NA	30349561	30340425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
Isoform_162885_56	chr7	-	1643	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	141	0	-32	0	multi-exon	FALSE	canonical	3	640	junction_5	133.345925331332	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3752	False	NA	-14	True	AATAAA	-16	NA	30349601	30340425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
Isoform_162895_509	chr7	-	2142	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	44	1	10	-1	multi-exon	FALSE	canonical	3	112	junction_13	34.9573373142001	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364375	30353141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_162896_501	chr7	-	2186	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	0	1	0	-1	multi-exon	FALSE	canonical	3	112	junction_13	34.9573373142001	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364419	30353141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_162899_42	chr7	-	2329	18	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	10	-1	intron_retention	FALSE	canonical	3	112	junction_12	35.9706724062312	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364375	30353141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_1629_12	chr10	-	3025	18	ISM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	-143	337453	-143	1	5prime_fragment	TRUE	canonical	2	9	junction_16	3.78487245697539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTGAAGGTAAAA	NA	False	NA	NA	False	AATATA	-28	NA	12745252	12596576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
Isoform_162901_37	chr7	-	2239	18	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	6	-1	intron_retention	FALSE	canonical	3	112	junction_12	35.877241680322	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364379	30353141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_162902_25	chr7	-	2422	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	10	-1	intron_retention	FALSE	canonical	3	112	junction_11	36.9805164072921	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364375	30353141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_162909_6	chr7	-	924	6	FSM	ENSMUSG00000006315.10	ENSMUST00000209065.2	727	6	-197	0	4	0	multi-exon	FALSE	canonical	3	791	junction_1	3.48711915483254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9279	False	NA	-12	True	AGTAAA	-18	NA	30428943	30427125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626
Isoform_16291_27	chr11	-	3624	11	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	67	junction_3	157.502507916541	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2049	False	NA	-2	True	AATAAA	-17	NA	100246912	100238152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100240446_100242035_100242128_100242243_100242352_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
Isoform_162910_280	chr7	-	824	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	49	-3	16	0	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATGTCCATCTCTC	9306	False	NA	-13	True	AGTAAA	-17	NA	30428916	30427126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
Isoform_162911_274	chr7	-	847	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	27	-4	-4	0	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9284	False	NA	-12	True	AGTAAA	-18	NA	30428938	30427125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
Isoform_162914_6	chr7	-	907	6	NIC	ENSMUSG00000006315.10	novel	870	7	NA	NA	17	0	intron_retention	FALSE	canonical	3	739	junction_5	23.0685933684739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9307	False	NA	-12	True	AGTAAA	-18	NA	30428915	30427125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
Isoform_162916_6	chr7	-	2181	3	NIC	ENSMUSG00000051314.12	novel	2301	3	NA	NA	-56	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCACGGGTTTTGGC	3205	False	NA	NA	False	AATAAA	-20	NA	30523256	30517775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30519540_30520101_30520164_30522901
Isoform_162917_36	chr7	-	1633	2	FSM	ENSMUSG00000019429.8	ENSMUST00000094583.2	1625	2	-7	-1	-7	1	multi-exon	FALSE	canonical	3	35	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAATAATGTTTCC	7659	False	NA	NA	False	AATAAA	-14	NA	30555610	30553753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30555330_30555553
Isoform_162918_3	chr7	-	1719	2	FSM	ENSMUSG00000019429.8	ENSMUST00000094583.2	1625	2	-87	-7	-87	7	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATGTTTCCTTATCT	7579	False	NA	NA	False	AATAAA	-20	NA	30555690	30553747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30555330_30555553
Isoform_162919_8	chr7	-	1164	4	ISM	ENSMUSG00000030577.15	ENSMUST00000189718.7	3672	13	10540	2	5510	-2	3prime_fragment	FALSE	canonical	2	5	junction_1	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCCTTTGTATTGGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	30567334	30565255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_30566088_30566442_30566528_30566886_30567006_30567206
Isoform_162920_4	chr7	-	2599	12	NIC	ENSMUSG00000036634.16	novel	2434	13	NA	NA	-185	-1	intron_retention	FALSE	canonical	0	0	junction_2	2.15130173930895	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGCCAGTCTAGACCCA	6421	False	NA	NA	False	AATAAA	-12	NA	30614483	30598608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30599124_30599776_30599822_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825_30611195_30611315_30611389_30612248_30612305_30614243
Isoform_162924_43	chr7	-	1728	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-55	746	-55	580	multi-exon	FALSE	canonical	3	69	junction_9	26.650458036969	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGTGTGTCCATGTT	8709	False	NA	-6	True	AATAAA	-24	NA	30656283	30645418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
Isoform_162925_4	chr7	-	2476	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-82	25	-82	-21	multi-exon	FALSE	canonical	3	69	junction_9	26.650458036969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAACTTAAAAAAAAAA	8682	False	NA	NA	False	NA	NA	NA	30656310	30644697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
Isoform_162926_22	chr7	-	2139	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-464	744	-464	582	multi-exon	FALSE	canonical	3	69	junction_9	26.650458036969	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGTCCATGTTGG	8300	False	NA	-4	True	AATAAA	-26	NA	30656692	30645416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
Isoform_162927_3	chr7	-	2540	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-137	16	-137	-12	multi-exon	TRUE	canonical	3	69	junction_9	26.650458036969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAATGAACCCT	8627	False	NA	NA	False	NA	NA	NA	30656365	30644688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
Isoform_162933_10	chr7	-	2217	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-545	747	-545	579	multi-exon	FALSE	canonical	3	69	junction_9	26.650458036969	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTGTGTGTCCATGT	8219	False	NA	-7	True	AATAAA	-23	NA	30656773	30645419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
Isoform_162934_4	chr7	-	1578	9	FSM	ENSMUSG00000058239.14	ENSMUST00000171338.8	994	9	0	-584	0	578	multi-exon	FALSE	canonical	2	3	junction_8	43.3688756483264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTGTGTCCATG	8810	False	NA	-8	True	AATAAA	-22	NA	30656182	30645420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30656120
Isoform_162938_168	chr7	-	2121	10	FSM	ENSMUSG00000001247.17	ENSMUST00000001279.15	2167	10	46	0	-3	0	multi-exon	FALSE	canonical	3	74	junction_7	47.1029867208513	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	-3	True	AATAAA	-17	NA	30672843	30657199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
Isoform_162939_7	chr7	-	2192	10	FSM	ENSMUSG00000001247.17	ENSMUST00000001279.15	2167	10	-28	3	-28	-1	multi-exon	FALSE	canonical	3	74	junction_7	47.1029867208513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTAAGCCTCTTGTTTT	NA	False	NA	-6	True	AATAAA	-14	NA	30672917	30657202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
Isoform_162940_191	chr7	-	2062	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	11	-2	-1	0	multi-exon	TRUE	canonical	3	93	junction_6	34.291945118351	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	-3	True	AATAAA	-17	NA	30672841	30657199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
Isoform_162941_10	chr7	-	2162	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	-89	-2	-52	0	multi-exon	FALSE	canonical	3	93	junction_6	34.291945118351	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	-3	True	AATAAA	-17	NA	30672941	30657199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
Isoform_162946_3	chr7	-	416	6	NNC	ENSMUSG00000009687.15	novel	500	7	NA	NA	895	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	40.8538859840775	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTCTGTCTTCTGTG	7755	False	NA	-7	True	GATAAA	-19	NA	30736468	30732154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_30732306_30732397_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736435
Isoform_162947_16	chr7	-	502	5	NNC	ENSMUSG00000009687.15	novel	593	5	NA	NA	884	0	intron_retention	FALSE	canonical	3	42	junction_4	22.1923410211721	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTCTGTCTTCTGTG	7744	False	NA	-7	True	GATAAA	-19	NA	30736479	30732154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736452
Isoform_162948_3	chr7	-	503	5	NNC	ENSMUSG00000009687.15	novel	593	5	NA	NA	900	0	intron_retention	FALSE	canonical	3	10	junction_4	35.9513560244951	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTCTGTCTTCTGTG	7760	False	NA	-7	True	GATAAA	-19	NA	30736463	30732154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736435
Isoform_162949_3	chr7	-	592	5	NNC	ENSMUSG00000009687.15	novel	593	5	NA	NA	892	1	intron_retention	FALSE	canonical	3	7	junction_4	37.2449661028172	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGAATTT	7752	False	NA	-2	True	GATAAA	-24	NA	30736471	30732149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736359
Isoform_162950_18	chr7	-	1827	14	FSM	ENSMUSG00000001249.15	ENSMUST00000108102.9	1830	14	-4	7	-4	1	multi-exon	TRUE	canonical	2	5	junction_11	2.8658363092611	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGGTCTCTGCGTCTAC	9108	False	NA	NA	False	AATAAA	-13	NA	30814719	30798156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802185_30802352_30802578_30802620_30802725_30802849_30802924_30803055_30808389_30808432_30808515_30808618_30810138_30810199_30814102_30814170_30814560
Isoform_162952_26	chr7	-	1581	6	FSM	ENSMUSG00000019194.16	ENSMUST00000098548.8	1573	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	16	junction_5	3.38230690505755	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATTCTCTCATTAAC	NA	False	NA	-1	True	AATAAA	-16	NA	30826436	30815948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30816562_30816648_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
Isoform_162954_20	chr7	-	1642	5	FSM	ENSMUSG00000019194.16	ENSMUST00000211945.2	1501	5	-141	0	18	0	multi-exon	FALSE	canonical	3	16	junction_4	3.69966214673719	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATTCTCTCATTAAC	NA	False	NA	-1	True	AATAAA	-16	NA	30826410	30815948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
Isoform_162959_28	chr7	-	2721	19	FSM	ENSMUSG00000001248.16	ENSMUST00000186634.7	2735	19	14	0	-5	0	multi-exon	FALSE	canonical	3	18	junction_6	68.1079390234699	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5749	False	NA	-1	True	AATAAA	-15	NA	30850444	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_162960_12	chr7	-	2836	19	NIC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	86.2625192202397	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4693	False	NA	-1	True	AATAAA	-15	NA	30851500	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30851261
Isoform_162964_370	chr7	-	2667	19	FSM	ENSMUSG00000001248.16	ENSMUST00000001280.14	2713	19	46	0	-3	0	multi-exon	FALSE	canonical	3	173	junction_6	41.078853711152	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5732	False	NA	-1	True	AATAAA	-15	NA	30850461	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_162965_40	chr7	-	2787	19	FSM	ENSMUSG00000001248.16	ENSMUST00000001280.14	2713	19	-74	0	-74	0	multi-exon	FALSE	canonical	3	173	junction_6	41.078853711152	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5612	False	NA	-1	True	AATAAA	-15	NA	30850581	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_162970_43	chr7	-	2765	19	NIC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_18	68.1823308996809	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4693	False	NA	-1	True	AATAAA	-15	NA	30851500	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30851261
Isoform_162971_99	chr7	-	2850	20	NIC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_19	77.4223227918279	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	889	False	NA	-1	True	AATAAA	-15	NA	30855304	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30854291_30854572_30855260
Isoform_162972_30	chr7	-	2938	20	NIC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_19	77.4223227918279	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	801	False	NA	-1	True	AATAAA	-15	NA	30855392	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30854291_30854572_30855260
Isoform_162976_25	chr7	-	2544	19	NIC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	69.7096270163988	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5744	False	NA	-1	True	AATAAA	-15	NA	30850449	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835132_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_162981_127	chr7	-	3735	18	FSM	ENSMUSG00000001248.16	ENSMUST00000185985.7	3722	18	-13	0	8	0	multi-exon	FALSE	canonical	3	189	junction_17	34.4459860006517	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5743	False	NA	-1	True	AATAAA	-15	NA	30850450	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_162982_12	chr7	-	3867	18	FSM	ENSMUSG00000001248.16	ENSMUST00000185985.7	3722	18	-145	0	-75	0	multi-exon	FALSE	canonical	3	189	junction_17	34.4459860006517	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5611	False	NA	-1	True	AATAAA	-15	NA	30850582	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_162983_21	chr7	-	3821	18	NIC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	17	0	intron_retention	FALSE	canonical	3	23	junction_17	66.5549178755831	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4716	False	NA	-1	True	AATAAA	-15	NA	30851477	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30851261
Isoform_162984_14	chr7	-	3976	19	NIC	ENSMUSG00000001248.16	novel	3810	19	NA	NA	-30	0	intron_retention	FALSE	canonical	3	45	junction_18	77.190101233222	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	842	False	NA	-1	True	AATAAA	-15	NA	30855351	30829551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30854291_30854572_30855260
Isoform_162990_254	chr7	-	1964	8	FSM	ENSMUSG00000036459.16	ENSMUST00000038537.9	1962	8	-10	8	-10	-8	multi-exon	FALSE	canonical	3	249	junction_5	31.7027005866976	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGGACCATGGTGGT	NA	False	NA	-10	True	AATATA	-12	NA	33832703	33808975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
Isoform_162995_5	chr7	-	1871	7	NIC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	115.481119187895	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGTGGTTATTTCTCA	NA	False	NA	-1	True	AATATA	-21	NA	33832703	33808966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33831913
Isoform_162996_8	chr7	-	2114	7	FSM	ENSMUSG00000036459.16	ENSMUST00000140911.4	968	7	-471	-675	-21	-8	multi-exon	FALSE	canonical	3	259	junction_4	28.1286725997197	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGGACCATGGTGGT	NA	False	NA	-10	True	AATATA	-12	NA	33832714	33808975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818632_33824909_33825012_33831913
Isoform_162998_4	chr7	-	2253	6	NIC	ENSMUSG00000036459.16	novel	968	7	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	276	junction_4	23.0824608740056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCATGGTGGTTATTTCT	NA	False	NA	-3	True	AATATA	-19	NA	33832715	33808968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818632_33824909_33825012_33831913
Isoform_162999_95	chr7	-	2596	18	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	31	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	585.006840524286	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGCCCTAGTGGGT	NA	False	NA	-2	True	AATAAA	-25	NA	33867969	33840114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33840892_33841227_33841278_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
Isoform_1630_4	chr10	-	3108	18	ISM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	-226	337453	-226	1	5prime_fragment	FALSE	canonical	2	9	junction_16	3.78487245697539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTGAAGGTAAAA	NA	False	NA	NA	False	AATATA	-28	NA	12745335	12596576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
Isoform_16300_1302	chr11	-	3650	11	FSM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	2	-1532	2	0	multi-exon	FALSE	canonical	3	486	junction_1	44.9070150421958	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2050	False	NA	-2	True	AATAAA	-17	NA	100246911	100238152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
Isoform_163020_5470	chr7	-	2540	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	31	8	31	-8	multi-exon	FALSE	canonical	0	0	junction_4	386.788858543974	5470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCTCTGTTGCCCTA	NA	False	NA	-8	True	AATAAA	-19	NA	33867969	33840120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
Isoform_163021_60	chr7	-	2588	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	-15	6	-15	-6	multi-exon	FALSE	canonical	0	0	junction_4	386.788858543974	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTGTTGCCCTAGT	NA	False	NA	-6	True	AATAAA	-21	NA	33868015	33840118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
Isoform_163040_732	chr7	-	1160	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	-1	136	-1	-2	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATATGTGTTTACCTT	5731	False	NA	NA	False	ATTAAA	-18	NA	33896087	33884059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
Isoform_163042_15	chr7	-	1303	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	-1	-7	-1	7	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATTGTTCATTTTCTT	5731	False	NA	1	True	TATAAA	-22	NA	33896087	33883916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
Isoform_163045_16	chr7	-	4056	6	NIC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	8	-3	intron_retention	FALSE	canonical	3	713	junction_1	37.7232024091275	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATGTGTTTACCT	5740	False	NA	NA	False	ATTAAA	-17	NA	33896078	33884060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33884237_33885718_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
Isoform_163046_50	chr7	-	1010	6	FSM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	-54	3	-1	-3	multi-exon	TRUE	canonical	3	50	junction_1	296.710903068964	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATGTGTTTACCT	5731	False	NA	NA	False	ATTAAA	-17	NA	33896087	33884060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33884237_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
Isoform_163069_3339	chr7	-	2038	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	50	796	3	33	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	3339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTATCTGTTACTT	NA	False	NA	-8	True	GGGGCT	-24	NA	33929711	33901550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
Isoform_163075_88	chr7	-	2068	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	15	801	15	28	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGTACTTTTATCTGT	NA	False	NA	-13	True	AATAAA	-44	NA	33929746	33901555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
Isoform_16308_25	chr11	-	3939	10	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	486	junction_1	46.7351349576116	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTCTCAGTTGTGT	2050	False	NA	-3	True	AATAAA	-16	NA	100246911	100238153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100240446_100242035_100242128_100242243_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
Isoform_163083_3	chr7	-	6199	14	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	42.6725526019024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	9822	False	NA	NA	False	ATTAAA	-18	NA	34012962	33936131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33938663_33939168_33939248_33939933_33940066_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
Isoform_163084_4	chr7	-	2140	4	ISM	ENSMUSG00000066571.14	ENSMUST00000085592.6	5798	13	43096	865	2613	1	3prime_fragment	FALSE	canonical	3	151	junction_3	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCCCTATGTA	3160	False	NA	NA	False	GATAAA	-20	NA	33941928	33937003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664
Isoform_163087_4	chr7	-	3014	4	ISM	ENSMUSG00000066571.14	ENSMUST00000085592.6	5798	13	43094	-7	2611	0	3prime_fragment	FALSE	canonical	3	151	junction_3	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	3158	False	NA	NA	False	ATTAAA	-18	NA	33941930	33936131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664
Isoform_163094_5	chr7	-	6272	15	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	48.9725558296664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATACTCTGTATCTTTT	9841	False	NA	NA	False	ATTAAA	-11	NA	34012943	33936138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34011513_34011602_34012911
Isoform_163095_4	chr7	-	6281	15	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_14	49.1409883365595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATACTCTGTATCTTTT	9827	False	NA	NA	False	ATTAAA	-11	NA	34012957	33936138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34011513_34011602_34012916
Isoform_163098_74	chr7	-	6220	14	FSM	ENSMUSG00000066571.14	ENSMUST00000108074.8	6224	14	4	0	-2	0	multi-exon	FALSE	canonical	3	49	junction_13	29.0706138861218	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	9812	False	NA	NA	False	ATTAAA	-18	NA	34012972	33936131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
Isoform_163099_12	chr7	-	5263	14	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	1	-81	combination_of_known_junctions	FALSE	canonical	3	60	junction_13	26.7307415605834	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGCTTTTCCAATGAA	9810	False	NA	NA	False	AATAAA	-22	NA	34012974	33937085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
Isoform_1631_18	chr10	-	2727	18	ISM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	151	337457	151	-3	5prime_fragment	FALSE	canonical	2	9	junction_16	3.78487245697539	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAAAGAAATTGAAGGT	NA	False	NA	NA	False	AATATA	-24	NA	12744958	12596580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
Isoform_163101_3	chr7	-	5734	14	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	1	390	combination_of_known_junctions	FALSE	canonical	3	60	junction_13	26.7307415605834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTCCACAGTGCTG	9810	False	NA	NA	False	NA	NA	NA	34012974	33936614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
Isoform_163102_5	chr7	-	4946	13	NIC	ENSMUSG00000066571.14	novel	5798	13	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	41.2501683498248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATACTCTGTATCTTTT	9827	False	NA	NA	False	ATTAAA	-11	NA	34012957	33936138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_34012911
Isoform_163110_437	chr7	-	2352	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-5	597	-5	472	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATACGTGTCCTTGCAGA	NA	False	NA	-3	True	AATAAA	-17	NA	34089117	34044667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
Isoform_163111_414	chr7	-	2881	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-2	65	-2	-48	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATCTGGCCACTTTG	NA	False	NA	-8	True	AATAAA	-27	NA	34089114	34044135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
Isoform_163113_442	chr7	-	2862	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	88	-6	88	6	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTATTTTGGTTTTTGTT	NA	False	NA	-5	True	AATAAA	-39	NA	34089024	34044064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
Isoform_163122_32	chr7	-	2768	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	51	-51	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	198.720599191956	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAAAGATCTGGCCACT	NA	False	NA	-11	True	AATAAA	-24	NA	34089061	34044138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_34045384_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
Isoform_163124_24	chr7	-	2799	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	87	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	198.720599191956	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTAACTATTTTGGT	NA	False	NA	-12	True	AATAAA	-32	NA	34089025	34044071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_34045384_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
Isoform_163131_26	chr7	-	2401	7	FSM	ENSMUSG00000030499.10	ENSMUST00000108069.8	2407	7	-3	9	-3	-4	multi-exon	TRUE	canonical	3	15	junction_6	8.78761755097605	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAAGACTGAGGCTCC	6796	False	NA	-20	True	CATAAA	-11	NA	34353826	34338447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34353671
Isoform_163135_14	chr7	-	2314	7	NNC	ENSMUSG00000030499.10	novel	2407	7	NA	NA	279	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.6065752079239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAAGACTGAGGCTCC	5967	False	NA	-20	True	CATAAA	-11	NA	34354655	34338447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34354587
Isoform_163137_55	chr7	-	2079	4	FSM	ENSMUSG00000060402.9	ENSMUST00000078686.8	2372	4	0	293	0	-2	multi-exon	FALSE	canonical	1	5	junction_3	4.02768199119819	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTCTACTCCAGGC	NA	False	NA	-1	True	AATAAA	-18	NA	34512111	34374185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34375670_34376059_34376098_34447486_34447703_34511770
Isoform_163138_4	chr7	-	2301	4	FSM	ENSMUSG00000060402.9	ENSMUST00000078686.8	2372	4	-220	291	-195	0	multi-exon	TRUE	canonical	1	5	junction_3	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTCTACTCCAGGCTG	NA	False	NA	1	True	AATAAA	-20	NA	34512331	34374183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34375670_34376059_34376098_34447486_34447703_34511770
Isoform_163139_10	chr7	-	2108	4	FSM	ENSMUSG00000060402.9	ENSMUST00000078686.8	2372	4	-30	294	-5	-3	multi-exon	FALSE	canonical	1	5	junction_3	4.02768199119819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGTCTACTCCAGG	NA	False	NA	-2	True	AATAAA	-17	NA	34512141	34374186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34375670_34376059_34376098_34447486_34447703_34511770
Isoform_163141_3	chr7	-	2470	3	NIC	ENSMUSG00000060402.9	novel	2372	4	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	5	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTCTACTCCAGGC	NA	False	NA	-1	True	AATAAA	-18	NA	34512112	34374185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_34376098_34447486_34447703_34511770
Isoform_163143_332	chr7	-	3675	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	8	1026	8	-1026	multi-exon	FALSE	canonical	3	425	junction_1	0	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTTTTTCTTCGTGGGTT	NA	False	NA	-4	True	AATAAA	-19	NA	34755990	34746872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34750358_34755800
Isoform_16315_80	chr11	-	1728	6	ISM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	20608	1	-3016	-1	3prime_fragment	FALSE	canonical	3	472	junction_4	54.0014814611599	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	6772	False	NA	-18	True	AATAAA	-17	NA	100267967	100261445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548
Isoform_163155_11	chr7	-	4028	8	FSM	ENSMUSG00000001802.17	ENSMUST00000122409.8	4147	8	115	4	-91	-3	multi-exon	FALSE	canonical	3	19	junction_6	4.69041575982343	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCGGCTGTTCCAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	34914808	34900306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
Isoform_163158_4	chr7	-	5661	7	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-85	-6	intron_retention	FALSE	canonical	3	19	junction_6	4.56131072780134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAATCGGCTGTTCCAG	NA	False	NA	NA	False	AATAAA	-10	NA	34914802	34900309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34912613_34914280
Isoform_163159_3	chr7	-	4317	7	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-85	-7	intron_retention	FALSE	canonical	3	19	junction_5	5.04700130990891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATCGGCTGTTCCA	NA	False	NA	NA	False	AATAAA	-9	NA	34914802	34900310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_34902095_34902353_34902487_34902692_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
Isoform_163160_16	chr7	-	3033	20	NIC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_17	36.8645796112867	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35017849	34975968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007757_35008725_35008812_35009864_35010000_35017765
Isoform_163161_273	chr7	-	3041	20	FSM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	16	8	-3	0	multi-exon	FALSE	canonical	3	140	junction_17	13.3084023611853	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35017849	34975968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
Isoform_163167_359	chr7	-	1667	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	28	162	28	-9	multi-exon	TRUE	canonical	3	143	junction_2	4.92160768674447	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGCAAAAGAAAAAA	NA	False	NA	NA	False	AAGAAA	-45	NA	35096233	35091738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
Isoform_163169_24	chr7	-	1313	5	FSM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	-100	-382	28	-9	multi-exon	FALSE	canonical	3	12	junction_4	59.3316947339278	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGCAAAAGAAAAAA	NA	False	NA	NA	False	AAGAAA	-45	NA	35096233	35091738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637_35095757_35096110
Isoform_163171_14	chr7	-	1776	3	FSM	ENSMUSG00000030493.14	ENSMUST00000141001.2	1690	3	-95	9	28	-9	multi-exon	FALSE	canonical	3	148	junction_1	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGCAAAAGAAAAAA	NA	False	NA	NA	False	AAGAAA	-45	NA	35096233	35091738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35092517_35094399_35094802_35095637
Isoform_163174_9	chr7	-	1561	12	NIC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-10	-11	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	138.171351278221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTGCTTCTAAAATT	NA	False	NA	-24	True	AATAAA	-22	NA	35237128	35193047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_35193357_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
Isoform_163175_432	chr7	-	1572	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	30	18	-22	11	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCAGAATTCTTGCTTC	NA	False	NA	-31	True	AATAAA	-15	NA	35237140	35193054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
Isoform_163179_20	chr7	-	1677	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	16	-12	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	137.361139499598	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCTTGCTTCTAAAAT	NA	False	NA	-25	True	AATAAA	-21	NA	35237154	35193048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_35193363_35193610_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
Isoform_163185_5	chr7	-	1171	3	FSM	ENSMUSG00000034875.6	ENSMUST00000142930.2	733	3	-102	-336	-102	0	multi-exon	FALSE	canonical	3	20	junction_2	165.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTTTATTCTACT	NA	False	NA	2	True	ATTAAA	-29	NA	35254721	35246609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35247549_35250878_35250968_35254578
Isoform_163187_69	chr7	-	1870	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	421	7	421	-7	multi-exon	FALSE	canonical	3	351	junction_1	2	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAAGTTGTATTTTTTA	NA	False	NA	-5	True	ATTAAA	-22	NA	35255308	35246616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35247549_35250878_35251087_35254578
Isoform_163188_22	chr7	-	1897	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	396	5	396	-5	multi-exon	FALSE	canonical	3	351	junction_1	2	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTTGTATTTTTTATT	NA	False	NA	-3	True	ATTAAA	-24	NA	35255333	35246614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35247549_35250878_35251087_35254578
Isoform_163189_139	chr7	-	1440	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	854	4	-256	-4	multi-exon	FALSE	canonical	3	351	junction_1	2	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTATTTTTTATTC	NA	False	NA	-2	True	ATTAAA	-25	NA	35254875	35246613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35247549_35250878_35251087_35254578
Isoform_163201_455	chr7	-	636	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	14	34	-3	0	multi-exon	FALSE	canonical	3	1740	junction_2	86.0883267348135	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTTGGGTGTTTCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	35346932	35341440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
Isoform_163202_515	chr7	-	602	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	48	34	-7	0	multi-exon	FALSE	canonical	3	1740	junction_2	86.0883267348135	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTTGGGTGTTTCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	35346898	35341440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
Isoform_163212_21	chr7	-	4275	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	53	3678	-2	1882	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTTAAATAGTT	NA	False	NA	NA	False	AATAAA	-11	NA	35453826	35388267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
Isoform_163215_3	chr7	-	3415	18	NIC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	-21	1127	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	5.11933711106696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTTTCCCTCCCGCTC	NA	False	NA	NA	False	ATTAAA	-19	NA	35453845	35389022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
Isoform_163220_58	chr7	-	6644	8	NNC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	-7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	3	31	junction_1	12.7487494384703	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCACTTGTTTCTAA	NA	False	NA	NA	False	AATAAA	-12	NA	35502399	35471776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_35475180_35475204_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
Isoform_163224_7	chr7	-	4589	6	FSM	ENSMUSG00000044452.11	ENSMUST00000187282.3	944	6	-26	-3619	-4	-12	multi-exon	FALSE	canonical	3	8	junction_4	23.3957261054236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAAAACCACTTGTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	35502418	35471779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35500862_35500954_35502258
Isoform_163225_33	chr7	-	3345	11	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	48	junction_1	265.936383370159	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37718966	37659417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_37661029_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
Isoform_163243_1018	chr7	-	3421	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	19	1	-1	0	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37718948	37659417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
Isoform_163246_34	chr7	-	3483	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-43	1	-19	0	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37719010	37659417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
Isoform_163250_141	chr7	-	2075	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-10	1376	-10	-4	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTGCTGGCTTCGTTA	NA	False	NA	-9	True	AGTAAA	-16	NA	37718977	37660792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
Isoform_163261_82	chr7	-	3403	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	145	junction_9	251.968251968378	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAGCCTGCTTTATC	NA	False	NA	-7	True	ATTAAA	-22	NA	37718966	37659418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
Isoform_163282_592	chr7	-	2003	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	-4	1	-4	-1	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTTCTTAACTCTG	NA	False	NA	-13	True	AATAAA	-18	NA	37806963	37797409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
Isoform_163283_1035	chr7	-	1940	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	59	1	27	-1	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTTCTTAACTCTG	NA	False	NA	-13	True	AATAAA	-18	NA	37806900	37797409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
Isoform_163284_163	chr7	-	2060	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	-61	1	-61	-1	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTTCTTAACTCTG	NA	False	NA	-13	True	AATAAA	-18	NA	37807020	37797409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
Isoform_163290_23	chr7	-	1871	11	NIC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	27	-1	combination_of_known_splicesites	FALSE	canonical	2	124	junction_8	222.463053112197	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTTCTTAACTCTG	NA	False	NA	-13	True	AATAAA	-18	NA	37806900	37797409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37806020_37806109_37806211_37806255_37806746
Isoform_163291_173	chr7	-	1526	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	36	3701	36	-3701	multi-exon	FALSE	canonical	3	140	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGATTGTTAAGAGT	NA	False	NA	-20	True	NA	NA	NA	37927404	37920096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_37921583_37927364
Isoform_163294_305	chr7	-	1213	7	FSM	ENSMUSG00000030423.8	ENSMUST00000032585.8	2113	7	72	828	-2	-828	multi-exon	FALSE	canonical	3	243	junction_2	18.1567251085284	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970775	37962247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968325_37968379_37970570
Isoform_163295_9	chr7	-	2301	7	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-2	-828	intron_retention	TRUE	canonical	3	24	junction_5	91.4706996195442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970799	37962247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37968084_37968325_37968379_37970570
Isoform_163296_4	chr7	-	1177	6	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-4	-828	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	108.909870994323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970801	37962247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_37962734_37963751_37963854_37965550_37965629_37966792_37967020_37968325_37968379_37970570
Isoform_163297_4	chr7	-	2254	6	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-1	-828	intron_retention	FALSE	canonical	3	243	junction_1	18.2800437636238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970798	37962247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968325_37968379_37970570
Isoform_163299_66	chr7	-	2905	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	30	-864	30	-3	multi-exon	FALSE	canonical	3	47	junction_4	16.2845785944863	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTTTTTTCTGACT	NA	False	NA	-17	True	AATAAA	-22	NA	41042773	41022349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
Isoform_163301_49	chr7	-	2757	4	FSM	ENSMUSG00000056383.11	ENSMUST00000071804.10	2671	4	-89	3	30	-3	multi-exon	FALSE	canonical	3	26	junction_3	27.3901847788988	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTTTTTTCTGACT	NA	False	NA	-17	True	AATAAA	-22	NA	41042773	41022349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41042650
Isoform_163303_4	chr7	-	2694	3	NIC	ENSMUSG00000056383.11	novel	2671	4	NA	NA	-33	-4	intron_retention	FALSE	canonical	1	2	junction_1	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTCCTTTTTTCTGAC	NA	False	NA	-18	True	AATAAA	-21	NA	41042769	41022350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_41024799_41026169_41026297_41042650
Isoform_163304_3	chr7	-	4029	4	NIC	ENSMUSG00000056383.11	novel	2071	5	NA	NA	22	-3	intron_retention	FALSE	canonical	3	47	junction_3	14.613540144522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTTTTTTCTGACT	NA	False	NA	-17	True	AATAAA	-22	NA	41042781	41022349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_41025973_41026169_41026297_41037531_41037680_41042650
Isoform_163305_27	chr7	-	2928	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	482	1	0	-1	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATTTGCTTTTTTTCTGT	NA	False	NA	-1	True	AATAAA	-20	NA	41148832	41128298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
Isoform_163307_10	chr7	-	3480	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	483	-552	1	552	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTGAGCTCTGATTTA	NA	False	NA	NA	False	NA	NA	NA	41148831	41127745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
Isoform_163308_3	chr7	-	1344	2	FSM	ENSMUSG00000074166.8	ENSMUST00000205995.2	1337	2	-8	1	-8	-1	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTGATGGTGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	41148840	41139271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_41140493_41148717
Isoform_163309_5	chr7	-	1765	2	FSM	ENSMUSG00000074166.8	ENSMUST00000205634.2	637	2	-9	-1119	-9	6	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTGCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	41148860	41139264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_41140887_41148717
Isoform_163311_210	chr7	-	2818	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	6	-1394	6	1394	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTTCTTTTTTTTTTAA	NA	False	NA	-1	True	NA	NA	NA	41210247	41193703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
Isoform_163312_28	chr7	-	5809	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	6	-4385	6	4385	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGCTGTACTTTGAC	NA	False	NA	NA	False	AATATA	-13	NA	41210247	41190712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
Isoform_163315_12	chr7	-	2881	4	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	6	1393	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	104.951840807529	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTTTCTTTTTTTTTTA	NA	False	NA	-2	True	NA	NA	NA	41210247	41193704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_41196224_41197139_41197201_41197407_41197535_41210073
Isoform_163316_35	chr7	-	4096	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	-21	-6	-7	6	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGCTGTCTTGGGATA	NA	False	NA	-9	True	AATAAA	-21	NA	42155171	42122803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
Isoform_163319_66	chr7	-	4055	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	14	0	13	0	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155136	42122809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
Isoform_163322_93	chr7	-	3987	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_5	88.2813683627525	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155136	42122809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42155033
Isoform_163326_14	chr7	-	3082	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	3	-968	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	78.7541886011292	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGT	NA	False	NA	-21	True	NA	NA	NA	42155161	42123777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
Isoform_163327_10	chr7	-	4037	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	13	12	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	78.7541886011292	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCTTGGGATAATGAGT	NA	False	NA	-3	True	AATAAA	-27	NA	42155136	42122797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
Isoform_163329_6	chr7	-	3967	6	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	12	9	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	98.7813747626545	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGTCTTGGGATAATG	NA	False	NA	-6	True	AATAAA	-24	NA	42155137	42122800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42155033
Isoform_163331_9	chr7	-	3536	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	12	-967	intron_retention	FALSE	canonical	3	217	junction_5	45.7226420933874	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCCTTGGTCATGTT	NA	False	NA	-20	True	NA	NA	NA	42155137	42123776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42150781_42150850_42155033
Isoform_163333_184	chr7	-	3675	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	1	-2251	1	2251	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTTGTTTTTCTTATC	NA	False	NA	-3	True	AGTAAA	-23	NA	42241970	42226955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
Isoform_163337_3	chr7	-	5401	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	-11	-3965	-11	-2597	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCATTGTGTAAATGTA	NA	False	NA	NA	False	NA	NA	NA	42241982	42225241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
Isoform_163339_23	chr7	-	3549	3	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	1	2252	multi-exon	FALSE	canonical	3	30	junction_2	106	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTCTTATCT	NA	False	NA	-2	True	AGTAAA	-24	NA	42241970	42226954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_42230333_42232070_42232132_42241860
Isoform_163342_116	chr7	-	4996	4	FSM	ENSMUSG00000074158.10	ENSMUST00000098503.9	1976	4	-40	-2980	1	2	multi-exon	FALSE	canonical	3	68	junction_3	11.7284080571728	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATAATCTCTTCTGA	NA	False	NA	-21	True	NA	NA	NA	42292011	42258947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42263648_42265396_42265458_42265656_42265784_42291903
Isoform_163344_4	chr7	-	4883	3	FSM	ENSMUSG00000074158.10	ENSMUST00000107994.3	4868	3	-15	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATAATCTCTTCT	NA	False	NA	-23	True	NA	NA	NA	42292027	42258949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42263648_42265396_42265458_42291903
Isoform_163345_437	chr7	-	3189	4	FSM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	-45	4	-21	-4	multi-exon	FALSE	canonical	3	231	junction_3	55.1784982277215	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTGGCGTGTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	42342187	42309532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42312421_42314181_42314243_42314441_42314569_42342074
Isoform_163348_14	chr7	-	3227	4	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	156.043441244916	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGGCGTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	42342162	42309533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42312421_42314181_42314243_42314441_42314569_42342010
Isoform_163349_27	chr7	-	3058	3	NIC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-18	-5	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	158	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGGCGTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	42342184	42309533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_42312421_42314181_42314243_42342074
Isoform_163351_3	chr7	-	4003	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11973	282	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAAGTCTATTCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	42388414	42354610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
Isoform_163352_3	chr7	-	5722	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11967	2007	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	-47	True	NA	NA	NA	42388408	42352885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
Isoform_163354_340	chr7	-	4075	4	FSM	ENSMUSG00000092225.2	ENSMUST00000174558.2	4073	4	1	-3	1	3	multi-exon	FALSE	canonical	3	126	junction_3	34.9888871246603	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATTAGTAATTTGTT	NA	False	NA	-11	True	AATAAA	-17	NA	42516657	42466249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42470028_42471782_42471844_42472041_42472168_42516547
Isoform_163355_30	chr7	-	8754	4	FSM	ENSMUSG00000092225.2	ENSMUST00000174558.2	4073	4	1	-4682	1	4682	multi-exon	FALSE	canonical	3	126	junction_3	34.9888871246603	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGATGCCCAACTTCTG	NA	False	NA	-12	True	AGTAAA	-11	NA	42516657	42461570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42470028_42471782_42471844_42472041_42472168_42516547
Isoform_163356_10	chr7	-	4177	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	86.8993670863028	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-12	True	AATAAA	-16	NA	42516657	42466250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42470028_42470526_42470630_42471782_42471844_42472041_42472168_42516547
Isoform_163359_28	chr7	-	5829	3	NIC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	2	intron_retention	FALSE	canonical	3	126	junction_2	42.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-12	True	AATAAA	-16	NA	42516657	42466250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_42471844_42472041_42472168_42516547
Isoform_163363_80	chr7	-	4200	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	-16	0	-8	0	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962695	42945946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
Isoform_163365_13	chr7	-	4086	5	NNC	ENSMUSG00000012640.17	novel	4184	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	35.7657308047802	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962522	42945946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962468
Isoform_163366_45	chr7	-	4266	5	NIC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	30.589009464185	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962696	42945946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962527
Isoform_163368_17	chr7	-	4156	5	NNC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	37.0607609204128	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962527	42945946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962468
Isoform_163369_5	chr7	-	1141	4	NIC	ENSMUSG00000038782.8	novel	1306	5	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTCTCAGTATCTGAC	NA	False	NA	NA	False	AATAAA	-15	NA	43896091	43879357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_43880066_43880749_43880897_43881779_43881981_43896006
Isoform_16337_41	chr11	-	3215	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_13	141.860503195442	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100288589	100261445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277212_100288461
Isoform_163370_7	chr7	-	1061	5	NIC	ENSMUSG00000008028.16	novel	913	6	NA	NA	19	-3	intron_retention	FALSE	canonical	2	14	junction_4	7.66485485837795	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCATTTCTCTCGGCAA	NA	False	NA	NA	False	TATAAA	-16	NA	44024435	44009469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44009806_44010473_44010608_44012075_44012440_44023746_44023949_44024410
Isoform_163372_333	chr7	-	1672	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	-22	12	0	-12	multi-exon	FALSE	canonical	3	258	junction_1	346.110162950988	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44145852	44139546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_16338_22	chr11	-	3352	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	142.103221088711	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100277583	100261445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100277321
Isoform_163380_1078	chr7	-	1609	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	61	185	11	-12	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44145876	44139546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_163381_52	chr7	-	1759	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	96	0	-11	0	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTTCTTGGTTCATTC	NA	False	NA	27	True	NA	NA	NA	44145841	44139361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_163386_90	chr7	-	1863	7	NIC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	1	-12	intron_retention	FALSE	canonical	3	278	junction_1	282.765509447905	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44145851	44139546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_163387_29	chr7	-	2547	7	NNC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	-2	-12	intron_retention	FALSE	non_canonical	1	6	junction_1	383.509959308606	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44145854	44139546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44140743_44140766_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_163389_4	chr7	-	1199	8	ISM	ENSMUSG00000038670.12	ENSMUST00000165208.4	3611	28	17452	24	1874	-24	3prime_fragment	FALSE	canonical	2	4	junction_7	5.67845911838623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATCATGTGTCCATCT	NA	False	NA	-19	True	GATAAA	-13	NA	44156628	44151146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44151267_44153060_44153248_44154422_44154560_44154659_44154820_44154989_44155130_44155475_44155672_44156231_44156321_44156458
Isoform_163390_5	chr7	-	1113	8	ISM	ENSMUSG00000038670.12	ENSMUST00000165208.4	3611	28	17537	25	1959	-25	3prime_fragment	FALSE	canonical	2	4	junction_7	5.67845911838623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTATCATGTGTCCATC	NA	False	NA	-20	True	GATAAA	-12	NA	44156543	44151147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44151267_44153060_44153248_44154422_44154560_44154659_44154820_44154989_44155130_44155475_44155672_44156231_44156321_44156458
Isoform_163391_4	chr7	-	3587	28	FSM	ENSMUSG00000038670.12	ENSMUST00000165208.4	3611	28	1	23	1	-23	multi-exon	FALSE	canonical	0	0	junction_8	5.68394847207433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATCATGTGTCCATCTT	NA	False	NA	-18	True	GATAAA	-14	NA	44174079	44151145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44151267_44153060_44153248_44154422_44154560_44154659_44154820_44154989_44155130_44155475_44155672_44156231_44156321_44156458_44156627_44157654_44157790_44158392_44158582_44158957_44159063_44159154_44159315_44161232_44161373_44161515_44161546_44161884_44161992_44163091_44163258_44164272_44164446_44165349_44165456_44165566_44165692_44165806_44165940_44166234_44166429_44169756_44169817_44170162_44170212_44171098_44171217_44171403_44171553_44171744_44171832_44172254_44172333_44173994
Isoform_163424_2907	chr7	-	3403	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	49	2	40	1	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	2907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTTGTGGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	44198222	44182171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
Isoform_163426_60	chr7	-	3510	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	-58	2	-56	1	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTTGTGGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	44198329	44182171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
Isoform_16343_48	chr11	-	3233	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_13	142.103221088711	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100288589	100261445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288446
Isoform_16344_1472	chr11	-	3235	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	-31	1	-17	-1	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100288606	100261445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
Isoform_163456_398	chr7	-	1955	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107911.8	1988	10	2	31	2	4	multi-exon	TRUE	canonical	0	0	junction_9	219.110209599227	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203370	44199071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203232
Isoform_163457_23	chr7	-	1943	10	NIC	ENSMUSG00000060601.14	novel	1988	10	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	212.17137261663	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203372	44199071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203246
Isoform_163458_195	chr7	-	1958	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107910.8	1948	10	-23	13	2	4	multi-exon	FALSE	canonical	0	0	junction_9	233.829683717988	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203370	44199071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202182_44203002_44203133_44203232
Isoform_16346_68	chr11	-	3272	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	-68	1	-54	-1	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100288643	100261445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
Isoform_163461_627	chr7	-	1961	10	FSM	ENSMUSG00000060601.14	ENSMUST00000073488.12	1999	10	3	35	2	1	multi-exon	FALSE	canonical	0	0	junction_9	207.457626195488	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAACAAAAATAAAG	NA	False	NA	-35	True	NA	NA	NA	44203370	44199074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
Isoform_163464_346	chr7	-	1967	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	224.012290227209	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203370	44199071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203232
Isoform_163466_39	chr7	-	2062	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	241.126522804937	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203370	44199071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201768_44201930_44202045_44202120_44202179_44203002_44203133_44203232
Isoform_163472_279	chr7	-	2225	9	FSM	ENSMUSG00000060601.14	ENSMUST00000123358.9	1853	9	-35	-337	2	4	multi-exon	FALSE	canonical	0	0	junction_8	201.405336014218	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203370	44199071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002_44203133_44203232
Isoform_163475_158	chr7	-	2228	9	NIC	ENSMUSG00000060601.14	novel	1948	10	NA	NA	2	4	intron_retention	FALSE	canonical	0	0	junction_8	224.141696254847	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203370	44199071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202182_44203002_44203133_44203232
Isoform_163487_7	chr7	-	1054	2	ISM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	7002	-2	7002	0	3prime_fragment	FALSE	canonical	3	83	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	618	False	NA	-1	True	AATAAA	-17	NA	44256547	44255226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44255788_44256054
Isoform_163489_3	chr7	-	1675	6	ISM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	-17	0	-17	0	intron_retention	FALSE	canonical	3	68	junction_5	8.68562030024339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGGCTGCGTTTCTAA	NA	False	NA	-3	True	AATAAA	-15	NA	44263566	44255228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065
Isoform_16349_23	chr11	-	3174	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	674	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_13	145.022340658055	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100287901	100261445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100287817
Isoform_163490_17	chr7	-	1430	7	FSM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	7	1	7	-1	multi-exon	FALSE	canonical	3	22	junction_6	22.8837642591132	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGGCTGCGTTTCTA	NA	False	NA	-4	True	AATAAA	-14	NA	44263542	44255229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263374
Isoform_163493_17	chr7	-	3897	21	ISM	ENSMUSG00000030739.19	ENSMUST00000107899.10	6390	40	34584	2	-335	0	3prime_fragment	FALSE	canonical	3	29	junction_14	18.5391477689779	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGGCTGCGTTTCTAA	NA	False	NA	-3	True	AATAAA	-15	NA	44280341	44255228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137
Isoform_163495_11	chr7	-	4121	24	NIC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_23	21.0276620404758	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	44282198	44255226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282174
Isoform_163498_6	chr7	-	5669	36	ISM	ENSMUSG00000030739.19	ENSMUST00000107899.10	6390	40	9853	0	-3080	0	3prime_fragment	FALSE	canonical	2	5	junction_31	24.1144211235196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	1927	False	NA	-1	True	AATAAA	-17	NA	44305072	44255226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282358_44282429_44282898_44283021_44283782_44283971_44287188_44287304_44287713_44287888_44288366_44288541_44288659_44288813_44290484_44290604_44292887_44292984_44301854_44301996_44303379_44303479_44304645_44304710_44305015
Isoform_163501_13	chr7	-	3722	21	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_20	20.5294909824866	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	44280019	44255226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44279992
Isoform_163503_3	chr7	-	3730	21	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	21.0842951032279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGCTGCGTTTCTAAT	NA	False	NA	-2	True	AATAAA	-16	NA	44279955	44255227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44279919
Isoform_163505_21	chr7	-	3758	5	NIC	ENSMUSG00000048012.20	novel	3559	5	NA	NA	-77	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	16.8077363139716	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTATTTTTTAATTTT	NA	False	NA	-6	True	AATAAA	-23	NA	44397550	44380904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397333
Isoform_163507_6	chr7	-	3990	5	NIC	ENSMUSG00000048012.20	novel	3559	5	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	16.8077363139716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCTATTTTTTAATTT	NA	False	NA	-7	True	AATAAA	-22	NA	44397783	44380905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397333
Isoform_163508_4	chr7	-	3722	5	NIC	ENSMUSG00000048012.20	novel	3624	5	NA	NA	-68	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	26.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCTATTTTTTAATTT	NA	False	NA	-7	True	AATAAA	-22	NA	44397541	44380905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397359
Isoform_163509_6	chr7	-	3616	5	FSM	ENSMUSG00000048012.20	ENSMUST00000118162.8	3091	5	1	-526	1	-3	multi-exon	FALSE	canonical	2	10	junction_4	23.9217474278114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGCTATTTTTTAATT	NA	False	NA	-8	True	AATAAA	-21	NA	44397729	44380906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397652
Isoform_163510_13	chr7	-	3594	5	FSM	ENSMUSG00000048012.20	ENSMUST00000120798.8	3559	5	-15	-20	-15	-3	multi-exon	FALSE	canonical	2	7	junction_4	24.8633766813762	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGCTATTTTTTAATT	NA	False	NA	-8	True	AATAAA	-21	NA	44397830	44380906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397775
Isoform_163511_8	chr7	-	3981	5	FSM	ENSMUSG00000048012.20	ENSMUST00000140599.9	1006	5	0	-2975	0	-4	multi-exon	FALSE	canonical	3	48	junction_2	7.63216876123687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGGCTATTTTTTAAT	NA	False	NA	-9	True	AATAAA	-20	NA	44397773	44380907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397333
Isoform_163512_39	chr7	-	3760	5	FSM	ENSMUSG00000048012.20	ENSMUST00000140599.9	1006	5	223	-2977	-77	-2	multi-exon	FALSE	canonical	3	48	junction_2	7.63216876123687	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCTATTTTTTAATTT	NA	False	NA	-7	True	AATAAA	-22	NA	44397550	44380905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397333
Isoform_163515_6	chr7	-	3657	5	FSM	ENSMUSG00000048012.20	ENSMUST00000120074.8	3624	5	1	-34	1	-1	multi-exon	FALSE	canonical	1	2	junction_4	25.0499500997507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTATTTTTTAATTTT	NA	False	NA	-6	True	AATAAA	-23	NA	44397472	44380904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397359
Isoform_163517_25	chr7	-	3590	5	FSM	ENSMUSG00000048012.20	ENSMUST00000060270.13	3800	5	215	-5	-11	5	multi-exon	FALSE	canonical	2	7	junction_4	22.9605640174626	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACTGGCTATTTTTTA	NA	False	NA	-11	True	AATAAA	-18	NA	44397826	44380909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397775
Isoform_163519_13	chr7	-	1815	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	0	1	0	0	multi-exon	FALSE	canonical	3	52	junction_1	35.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	9686	False	NA	-1	True	AATAAA	-18	NA	44466082	44461680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44462945_44464412_44464707_44465825
Isoform_163520_64	chr7	-	1756	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	59	1	-25	0	multi-exon	FALSE	canonical	3	52	junction_1	35.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	9745	False	NA	-1	True	AATAAA	-18	NA	44466023	44461680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44462945_44464412_44464707_44465825
Isoform_163521_14	chr7	-	2183	17	FSM	ENSMUSG00000038520.16	ENSMUST00000145959.8	2362	17	178	1	-6	0	multi-exon	FALSE	canonical	2	8	junction_3	59.8690954813082	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7877	False	NA	-11	True	AATAAA	-14	NA	44498325	44490456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491609_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
Isoform_163526_981	chr7	-	2177	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	174	6399	-6	10	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATCAGGACACTTTGCT	7877	False	NA	0	True	AATAAA	-25	NA	44498325	44490445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
Isoform_163527_48	chr7	-	2354	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	-12	6408	-8	1	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7691	False	NA	-9	True	AATAAA	-16	NA	44498511	44490454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
Isoform_163528_17	chr7	-	2301	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	174	6275	-6	3	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGGTGTAGTGTTCATTC	7877	False	NA	NA	False	NA	NA	NA	44498325	44490321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
Isoform_16353_25	chr11	-	2021	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	140	17	140	-17	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATCATAACACCTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	100305522	100299298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
Isoform_163537_361	chr7	-	1552	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	147	0	combination_of_known_junctions	FALSE	canonical	3	386	junction_1	117.813647577671	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5587	False	NA	-9	True	AATAAA	-14	NA	44519065	44512491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_163538_58	chr7	-	1716	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	386	junction_1	117.813647577671	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5422	False	NA	-10	True	AATAAA	-13	NA	44519230	44512492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_163539_65	chr7	-	1595	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	104	0	combination_of_known_junctions	FALSE	canonical	3	386	junction_1	117.813647577671	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5544	False	NA	-9	True	AATAAA	-14	NA	44519108	44512491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_16354_92	chr11	-	1743	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	140	295	140	-295	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGACACAGTTGACCTA	NA	False	NA	-8	True	NA	NA	NA	100305522	100299576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
Isoform_163544_40	chr7	-	2222	12	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	127	0	intron_retention	FALSE	canonical	3	386	junction_1	122.965627126224	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5567	False	NA	-9	True	AATAAA	-14	NA	44519085	44512491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44512619_44512802_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_163550_571	chr7	-	1755	12	FSM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	128	0	128	0	multi-exon	FALSE	canonical	3	715	junction_7	41.0738097969944	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5568	False	NA	-9	True	AATAAA	-14	NA	44519084	44512491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_163551_85	chr7	-	1902	12	FSM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	-18	-1	-18	0	multi-exon	FALSE	canonical	3	715	junction_7	41.0738097969944	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	5422	False	NA	-8	True	AATAAA	-15	NA	44519230	44512490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_163557_41	chr7	-	2387	11	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	146	0	intron_retention	FALSE	canonical	3	715	junction_6	42.6240542417072	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5586	False	NA	-9	True	AATAAA	-14	NA	44519066	44512491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_16356_12	chr11	-	2403	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	109	-334	109	334	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTCTTTCCTGGAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	100305553	100298947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
Isoform_163569_87	chr7	-	3716	18	FSM	ENSMUSG00000002968.10	ENSMUST00000208253.2	3693	18	-23	0	3	0	multi-exon	FALSE	canonical	3	62	junction_1	207.582576223432	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6953	False	NA	-4	True	NA	NA	NA	44541838	44526188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44527715_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_163586_43	chr7	-	2553	19	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_15	278.978344440329	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6949	False	NA	-9	True	AATAAA	-14	NA	44541842	44528810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44538710_44538942_44541206_44541332_44541522_44541569_44541654
Isoform_163589_1870	chr7	-	2328	18	FSM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	288	3	-5	-3	multi-exon	FALSE	canonical	3	744	junction_9	66.5493546850497	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6943	False	NA	-9	True	AATAAA	-14	NA	44541848	44528810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_16359_3	chr11	-	1949	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	-62	291	-62	-291	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACAGTTGACCTAGTTT	NA	False	NA	-4	True	NA	NA	NA	100305724	100299572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
Isoform_163595_434	chr7	-	2324	18	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	175	junction_9	180.66160609536	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6950	False	NA	-9	True	AATAAA	-14	NA	44541841	44528810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_163600_198	chr7	-	2250	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	203.468018064265	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6949	False	NA	-9	True	AATAAA	-14	NA	44541842	44528810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_163603_51	chr7	-	2252	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	261.121551856123	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6950	False	NA	-9	True	AATAAA	-14	NA	44541841	44528810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_163607_41	chr7	-	2734	17	FSM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	-52	-4	0	-3	multi-exon	FALSE	canonical	3	744	junction_8	64.3087948398195	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6949	False	NA	-9	True	AATAAA	-14	NA	44541842	44528810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_163614_52	chr7	-	3364	23	NIC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	10	-3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	144.442358888666	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTATTGACTGCCCAC	NA	False	NA	-6	True	AATAAA	-21	NA	44578904	44549800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552172_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
Isoform_163615_3	chr7	-	3308	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	144.442358888666	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCAGCTATTGACTGCC	NA	False	NA	-9	True	AATAAA	-18	NA	44578853	44549803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552174_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
Isoform_163616_7	chr7	-	4510	21	NIC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	7	0	intron_retention	FALSE	canonical	3	560	junction_17	48.4758702861537	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578879	44549797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
Isoform_163618_65	chr7	-	2744	19	FSM	ENSMUSG00000007783.11	ENSMUST00000063761.8	2793	19	50	-1	-23	0	multi-exon	FALSE	canonical	3	39	junction_13	17.8819862459058	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	2714	False	NA	-1	True	AATAAA	-21	NA	44624225	44608795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
Isoform_163619_7	chr7	-	2727	19	FSM	ENSMUSG00000007783.11	ENSMUST00000212836.2	2716	19	-12	1	-9	0	multi-exon	FALSE	canonical	1	2	junction_18	22.8379287076197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2728	False	NA	-2	True	AATAAA	-20	NA	44624211	44608796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624020
Isoform_163620_9	chr7	-	2200	14	NNC	ENSMUSG00000007783.11	novel	2716	19	NA	NA	2457	0	intron_retention	FALSE	canonical	2	5	junction_13	22.7783245873334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	6895	False	NA	-1	True	AATAAA	-21	NA	44620044	44608795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619675
Isoform_163621_4	chr7	-	2744	19	NIC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_12	22.9903361340272	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2716	False	NA	-2	True	AATAAA	-20	NA	44624223	44608796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616332_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
Isoform_163622_14	chr7	-	2736	19	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.1882393562867	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	2721	False	NA	-1	True	AATAAA	-21	NA	44624218	44608795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611070_44611565_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
Isoform_163637_300	chr7	-	1306	11	FSM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	204	-2	-8	2	multi-exon	FALSE	canonical	3	222	junction_9	1333.46760365597	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCGCCCTGGGGCTGG	NA	False	NA	-28	True	AATAAA	-19	NA	44635788	44626179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
Isoform_163640_5095	chr7	-	1256	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	125	766	-11	3	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	5095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCGCCCTGGGGCTGGG	NA	False	NA	-27	True	AATAAA	-20	NA	44635791	44626178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
Isoform_163643_96	chr7	-	1302	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	79	766	21	3	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCGCCCTGGGGCTGGG	NA	False	NA	-27	True	AATAAA	-20	NA	44635837	44626178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
Isoform_16365_46	chr11	-	1474	8	FSM	ENSMUSG00000017176.18	ENSMUST00000107397.2	1348	8	-121	-5	24	-1	multi-exon	FALSE	canonical	3	485	junction_1	42.2470866040561	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331875	100320179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
Isoform_163652_3	chr7	-	1448	7	ISM	ENSMUSG00000003190.13	ENSMUST00000208128.2	1596	8	1129	0	-4	0	3prime_fragment	FALSE	canonical	3	11	junction_2	55.4907399682345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44647007	44640645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44640879_44642167_44642456_44643234_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_163653_4	chr7	-	1131	8	NNC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.0081332089167	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGAAAGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	44647003	44640647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44640879_44642167_44642456_44643234_44643293_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_163654_4	chr7	-	1048	7	NNC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	71.3271025316153	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTGTGTGTACATT	NA	False	NA	NA	False	ATTAAA	-26	NA	44647005	44640640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44640879_44642167_44642456_44643234_44643293_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_163655_124	chr7	-	1065	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	10	0	-7	0	multi-exon	FALSE	canonical	3	119	junction_2	18.8473399243029	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44646993	44640645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_163656_8	chr7	-	985	6	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	59.7943141109587	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGAAAGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	44647007	44640647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44640879_44642167_44642456_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_163657_4	chr7	-	2238	6	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	129	junction_1	14.1619207736804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCGAAAGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	44647021	44640648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44640879_44642167_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_163658_5	chr7	-	788	6	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	60.7730203297483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGAAAGTGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	44647005	44640646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44640879_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_163659_14	chr7	-	700	5	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	66.4115953730973	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44647008	44640645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44640879_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_16366_574	chr11	-	1373	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	25	1	9	-1	multi-exon	FALSE	canonical	3	274	junction_8	92.107868149252	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331890	100320179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
Isoform_163661_4	chr7	-	3513	5	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	154	junction_1	5.1234753829798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCCGAAAGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	44647008	44640649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_163680_6	chr7	-	4767	12	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	39	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	85.2363752714854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5325	False	NA	-7	True	ATTAAA	-16	NA	44665516	44652372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44664888
Isoform_163681_46	chr7	-	4162	12	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	29	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	81.4000426421802	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5315	False	NA	-7	True	ATTAAA	-16	NA	44665526	44652372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44665503
Isoform_163683_13	chr7	-	4204	11	FSM	ENSMUSG00000038406.18	ENSMUST00000085383.11	4293	11	86	3	86	-3	multi-exon	FALSE	canonical	3	86	junction_10	46.9408137978029	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACAGGCGTAGTGGTGT	5140	False	NA	-9	True	ATTAAA	-14	NA	44665701	44652374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
Isoform_163684_150	chr7	-	4042	11	FSM	ENSMUSG00000038406.18	ENSMUST00000085383.11	4293	11	251	0	19	0	multi-exon	FALSE	canonical	3	86	junction_10	46.9408137978029	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5305	False	NA	-6	True	ATTAAA	-17	NA	44665536	44652371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
Isoform_163686_3	chr7	-	1854	6	FSM	ENSMUSG00000046574.9	ENSMUST00000210410.2	1487	6	181	-548	181	-144	multi-exon	FALSE	canonical	3	41	junction_4	2.4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCAGGCTGGAGTGCTCT	NA	False	NA	-5	True	NA	NA	NA	44683637	44677130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168
Isoform_163687_3	chr7	-	2230	9	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	9430	138	-9057	-138	3prime_fragment	FALSE	canonical	3	23	junction_8	7.73688406272189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGAGTGCTCTGTCTGC	NA	False	NA	1	True	NA	NA	NA	44692875	44677124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775
Isoform_163688_3	chr7	-	2678	10	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	7045	141	7045	-141	3prime_fragment	FALSE	canonical	3	21	junction_9	9.01849950564579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTGGAGTGCTCTGTC	NA	False	NA	-2	True	NA	NA	NA	44695260	44677127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146
Isoform_163689_3	chr7	-	1045	4	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	-455	22337	-455	-21645	5prime_fragment	FALSE	canonical	3	13	junction_3	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGCCCTCGTCATTGG	NA	False	NA	NA	False	NA	NA	NA	44702760	44699323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44699553_44699628_44699791_44700641_44700755_44702219
Isoform_16369_19	chr11	-	1340	8	FSM	ENSMUSG00000017176.18	ENSMUST00000092689.9	1344	8	6	-2	2	-1	multi-exon	FALSE	canonical	3	21	junction_7	183.081112836772	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331840	100320179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331753
Isoform_163690_5	chr7	-	1369	7	FSM	ENSMUSG00000007837.12	ENSMUST00000007981.9	1295	7	-72	-2	-18	2	multi-exon	FALSE	canonical	3	16	junction_5	9.01233722306385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATGCAAAA	NA	False	NA	-51	True	AATAAA	-17	NA	44711148	44703034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011
Isoform_163691_7	chr7	-	1322	8	FSM	ENSMUSG00000007837.12	ENSMUST00000210690.2	1623	8	273	28	0	1	multi-exon	FALSE	canonical	3	9	junction_7	11.5121940673747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAATAAAAATGCAAA	NA	False	NA	-52	True	AATAAA	-16	NA	44711828	44703035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011_44711076_44711801
Isoform_163693_5	chr7	-	1229	6	FSM	ENSMUSG00000007837.12	ENSMUST00000209920.2	876	6	-29	-324	-28	5	multi-exon	FALSE	canonical	3	12	junction_4	10.7962956610126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGGGCGCATTTGCGC	NA	False	NA	-19	True	AATAAA	-22	NA	44711158	44703002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44710164_44710317_44711011
Isoform_163694_120	chr7	-	1391	7	FSM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	69	2	-29	-2	multi-exon	FALSE	canonical	3	94	junction_6	35.1362427637839	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTCTGTCTGTCTG	6729	False	NA	-6	True	AATAAA	-23	NA	44741576	44732338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
Isoform_163695_77	chr7	-	1434	7	FSM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	15	4	8	-4	multi-exon	FALSE	canonical	3	54	junction_6	48.2482008875864	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTCTGTCTGTCTGTC	6675	False	NA	-8	True	AATAAA	-21	NA	44741630	44732340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
Isoform_163696_13	chr7	-	1385	7	NIC	ENSMUSG00000019539.12	novel	1453	7	NA	NA	10	4	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	63.9463751035889	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATC	6677	False	NA	0	True	AATAAA	-29	NA	44741628	44732332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741583
Isoform_163697_7	chr7	-	1671	7	FSM	ENSMUSG00000003420.9	ENSMUST00000210642.2	1602	7	-68	-1	-18	1	multi-exon	FALSE	canonical	3	14	junction_4	28.0475786239502	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTGTGCATCGTTA	803	False	NA	-6	True	CATAAA	-11	NA	44753237	44742486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751825_44752096_44752426_44752698_44753063
Isoform_163698_4	chr7	-	1797	8	NNC	ENSMUSG00000003420.9	novel	1602	7	NA	NA	-2678	3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	32.7432809745693	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTGCATCGTTATT	NA	False	NA	-4	True	CATAAA	-13	NA	44755953	44742484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751825_44752096_44752426_44752698_44753063_44753189_44755780
Isoform_163699_53	chr7	-	1638	7	FSM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	59	73	3	1	multi-exon	FALSE	canonical	3	66	junction_3	11.6583303550151	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTGTGCATCGTTA	824	False	NA	-6	True	CATAAA	-11	NA	44753216	44742486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063
Isoform_1637_50	chr10	-	2258	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	41	-2	41	2	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTTTTGATGAGATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	13068871	13053881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
Isoform_16370_10	chr11	-	1274	8	NIC	ENSMUSG00000017176.18	novel	1399	9	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	187.185818405789	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331890	100320179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331869
Isoform_163700_5	chr7	-	1701	7	FSM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	59	10	3	-10	multi-exon	FALSE	canonical	3	66	junction_3	11.6583303550151	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCATATAGACACCTC	824	False	NA	57	True	AATAAA	-16	NA	44753216	44742423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063
Isoform_163703_11	chr7	-	1814	8	NNC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	-2709	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	25.6515106767613	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTGTGCATCGTTA	NA	False	NA	-6	True	CATAAA	-11	NA	44755984	44742486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063_44753189_44755780
Isoform_163704_8	chr7	-	1783	8	NNC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	-2678	5	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	26.6075023945027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCATCGTTATTCT	NA	False	NA	-2	True	CATAAA	-15	NA	44755953	44742482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063_44753185_44755780
Isoform_16371_8	chr11	-	1349	8	NIC	ENSMUSG00000017176.18	novel	1399	9	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	192.879998645663	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331913	100320179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100331010_100331081_100331654_100331754_100331869
Isoform_163715_12828	chr7	-	589	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	67	5	-21	-5	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	12828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44773796	44771807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
Isoform_163717_191	chr7	-	669	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	-13	5	-13	-5	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44773876	44771807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
Isoform_16373_15	chr11	-	2398	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	-7	2	-7	-2	multi-exon	FALSE	canonical	3	21	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTAGTTACTTGG	7687	False	NA	-10	True	ATTAAA	-14	NA	100363574	100353441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100355272_100363006
Isoform_163743_232	chr7	-	816	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	-1	-81	0	0	multi-exon	FALSE	canonical	3	1166	junction_7	5527.98350879137	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
Isoform_163746_8177	chr7	-	658	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	25	364	0	0	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	8177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
Isoform_163747_1394	chr7	-	1016	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	25	6	0	-6	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTACGATGTGTGCTG	NA	False	NA	-7	True	AATAAA	-13	NA	44778160	44774987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
Isoform_16375_7	chr11	-	7941	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	-57	-5491	-57	5491	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTTGTACTGTGTGT	7637	False	NA	-6	True	AATAAA	-14	NA	100363624	100347948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100355272_100363006
Isoform_16376_7	chr11	-	7876	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	8	-5491	8	5491	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTTGTACTGTGTGT	7702	False	NA	-6	True	AATAAA	-14	NA	100363559	100347948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100355272_100363006
Isoform_163780_1027	chr7	-	2604	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	3	930	3	0	multi-exon	FALSE	canonical	3	349	junction_15	41.3256881370413	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9336	False	NA	-8	True	AATAAA	-20	NA	44803994	44791258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
Isoform_163781_1076	chr7	-	2577	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	30	930	-17	0	multi-exon	FALSE	canonical	3	349	junction_15	41.3256881370413	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9363	False	NA	-8	True	AATAAA	-20	NA	44803967	44791258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
Isoform_163783_47	chr7	-	2469	16	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-10	2	combination_of_known_junctions	TRUE	canonical	3	27	junction_15	102.490454840113	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGGATGTGGGAACAGT	9370	False	NA	-6	True	AATAAA	-22	NA	44803960	44791256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44803815
Isoform_163795_31	chr7	-	2040	20	NNC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	372	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	15.2344557716802	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGGATGATTTCCTCA	9450	False	NA	-3	True	NA	NA	NA	44853944	44833046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373_44839452_44842599_44842651_44842882_44843001_44843383_44843546_44843773_44843841_44844952_44845018_44845391_44845579_44845930_44846036_44849668_44849810_44853866
Isoform_163796_3	chr7	-	1096	10	NIC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	-54	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	12.720159949301	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCACAGGATGATTTC	9351	False	NA	-7	True	NA	NA	NA	44839544	44833050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373
Isoform_163797_3	chr7	-	1023	9	NIC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	-65	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	18.6195461813654	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGGATGATTTCCTCA	9340	False	NA	-3	True	NA	NA	NA	44839555	44833046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44837565_44837722_44838276_44838342_44838764_44838825_44839060_44839118_44839373
Isoform_163798_20	chr7	-	901	5	FSM	ENSMUSG00000030792.9	ENSMUST00000033057.9	1149	5	241	7	-59	-1	multi-exon	FALSE	canonical	3	39	junction_1	6.17960354715414	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAATCTCCTTTTGGTA	8542	False	NA	-5	True	AATAAA	-16	NA	44861306	44856949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44857323_44859536_44859627_44859754_44859896_44860824_44860995_44861179
Isoform_1638_1113	chr10	-	1797	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	42	458	42	-458	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAATTGGTGTGCTCATT	NA	False	NA	-20	True	GATAAA	-28	NA	13068870	13054341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
Isoform_163800_3	chr7	-	1148	5	FSM	ENSMUSG00000030792.9	ENSMUST00000033057.9	1149	5	-7	8	-7	-2	multi-exon	FALSE	canonical	3	39	junction_1	6.17960354715414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAATCTCCTTTTGGT	8294	False	NA	-6	True	AATAAA	-15	NA	44861554	44856950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44857323_44859536_44859627_44859754_44859896_44860824_44860995_44861179
Isoform_163801_31	chr7	-	1209	8	FSM	ENSMUSG00000030798.16	ENSMUST00000098461.10	1227	8	13	5	-12	0	multi-exon	FALSE	canonical	3	49	junction_1	15.6426940630769	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTGGT	4432	False	NA	-18	True	AATAAA	-20	NA	44888251	44883060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
Isoform_163803_7	chr7	-	1251	9	FSM	ENSMUSG00000030798.16	ENSMUST00000033063.15	1268	9	21	-4	21	0	multi-exon	FALSE	canonical	3	15	junction_8	25.228641957109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTGGT	4165	False	NA	-18	True	AATAAA	-20	NA	44888518	44883060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083_44888159_44888383
Isoform_163805_35	chr7	-	2555	6	FSM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	-17	3	8	1	multi-exon	FALSE	canonical	3	78	junction_5	4.63033476111609	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTTTTTTTTTTTTTTT	4427	False	NA	-21	True	AATAAA	-17	NA	44888256	44883063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
Isoform_163807_4	chr7	-	2092	6	FSM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	-42	491	-17	42	multi-exon	FALSE	canonical	3	78	junction_5	4.63033476111609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGAGCTTTCTCTTT	4402	False	NA	NA	False	AATAAA	-16	NA	44888281	44883551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
Isoform_163808_3	chr7	-	2499	6	NIC	ENSMUSG00000030798.16	novel	2541	6	NA	NA	-16	0	intron_retention	FALSE	canonical	3	6	junction_5	33.1445319773866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTGGT	4186	False	NA	-18	True	AATAAA	-20	NA	44888497	44883060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888383
Isoform_163809_3	chr7	-	994	2	FSM	ENSMUSG00000030798.16	ENSMUST00000210372.2	960	2	-30	-4	-11	4	multi-exon	FALSE	canonical	3	78	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAGGAAAGGA	4433	False	NA	NA	False	NA	NA	NA	44888250	44887169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44887997_44888083
Isoform_163810_4	chr7	-	1261	7	ISM	ENSMUSG00000038260.11	ENSMUST00000211743.2	3673	23	24883	0	2795	0	3prime_fragment	FALSE	canonical	3	139	junction_4	14.996295838936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	NA	False	NA	-10	True	AATAAA	-15	NA	44958197	44952781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967
Isoform_163813_170	chr7	-	4046	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	-10	198	1	-3	multi-exon	FALSE	canonical	3	102	junction_19	18.3832181168949	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACATGCTTGGCTCCTGT	3191	False	NA	-5	True	AATAAA	-20	NA	44983203	44952776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
Isoform_163815_7	chr7	-	4257	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	-23	0	-12	0	multi-exon	FALSE	canonical	3	102	junction_19	18.3832181168949	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGGGTGGGCGCTGCTG	3178	False	NA	NA	False	NA	NA	NA	44983216	44952578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
Isoform_163816_3	chr7	-	3847	24	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_22	32.8910672711936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCGCACATGCTTGGC	3209	False	NA	-11	True	AATAAA	-14	NA	44983185	44952782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44982805_44982877_44983110
Isoform_163817_3	chr7	-	3328	21	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	34.5021738445565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTCGCACATGCTTGG	3198	False	NA	-12	True	AATAAA	-13	NA	44983196	44952783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44982805_44982877_44983110
Isoform_163821_9	chr7	-	1161	3	ISM	ENSMUSG00000003863.19	ENSMUST00000211098.2	1467	4	389	-1	-9	0	3prime_fragment	FALSE	canonical	3	52	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	7375	False	NA	-2	True	NA	NA	NA	44990195	44988549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44989442_44989612_44989685_44989998
Isoform_163823_3	chr7	-	2842	7	ISM	ENSMUSG00000003863.19	ENSMUST00000211067.2	4565	30	23026	0	-2528	0	intron_retention	FALSE	canonical	3	29	junction_6	11.9536140513607	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	4458	False	NA	-2	True	NA	NA	NA	44993112	44988549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749
Isoform_163824_7	chr7	-	1752	8	ISM	ENSMUSG00000003863.19	ENSMUST00000211067.2	4565	30	23065	0	-2489	0	3prime_fragment	FALSE	canonical	3	8	junction_7	19.3422451897289	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	4497	False	NA	-2	True	NA	NA	NA	44993073	44988549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44992976
Isoform_163828_8	chr7	-	3206	19	NIC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	4683	3	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	19.3645979643521	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCTGGTGGTGACCAG	9489	False	NA	-5	True	NA	NA	NA	45004854	44988701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582
Isoform_163829_4	chr7	-	3294	19	NIC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	4747	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	19.3645979643521	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	9553	False	NA	-2	True	NA	NA	NA	45004790	44988549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582
Isoform_163832_8	chr7	-	1570	7	NNC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	-1058	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_6	15.0711276581711	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	5928	False	NA	-2	True	NA	NA	NA	44991642	44988549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991551
Isoform_163835_14	chr7	-	762	6	FSM	ENSMUSG00000003872.10	ENSMUST00000003971.10	735	6	-27	0	-27	0	multi-exon	FALSE	canonical	2	8	junction_1	1.93907194296653	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGTCTTGTGTGTCTG	7915	False	NA	1	True	TTTAAA	-16	NA	45020034	45017314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45017423_45017727_45017892_45018564_45018775_45019338_45019411_45019550_45019670_45019945
Isoform_163836_3	chr7	-	1397	5	NIC	ENSMUSG00000003872.10	novel	735	6	NA	NA	11	0	intron_retention	FALSE	canonical	2	8	junction_1	1.22474487139159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGTCTTGTGTGTCTG	7953	False	NA	1	True	TTTAAA	-16	NA	45019996	45017314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_45017423_45017727_45018775_45019338_45019411_45019550_45019670_45019945
Isoform_163860_61	chr7	-	1766	11	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	573.136842298591	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTCTTACTGCACTT	9091	False	NA	1	True	AATAAA	-26	NA	45045116	45025875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
Isoform_163862_1143	chr7	-	1677	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	52	6	2	0	multi-exon	FALSE	canonical	3	1192	junction_9	143.840189098875	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCATGTGATGTCTTAC	9093	False	NA	-6	True	AATAAA	-19	NA	45045114	45025882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
Isoform_163863_996	chr7	-	1720	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	14	1	14	-1	multi-exon	FALSE	canonical	3	1192	junction_9	143.840189098875	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	9055	False	NA	-1	True	AATAAA	-24	NA	45045152	45025877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
Isoform_163872_35	chr7	-	4080	10	FSM	ENSMUSG00000063511.12	ENSMUST00000211366.2	4008	10	-69	-3	15	0	multi-exon	FALSE	canonical	3	95	junction_3	443.86935014709	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCATGTGATGTCTTAC	9056	False	NA	-6	True	AATAAA	-19	NA	45045151	45025882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45026703_45026779_45026868_45030140_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
Isoform_163893_3425	chr7	-	1496	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	340	-2	-6	1	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	3425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	-19	True	NA	-2	True	TATAAA	-17	NA	45083707	45071319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
Isoform_163894_314	chr7	-	1819	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	17	-2	17	1	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	9199	False	NA	-2	True	TATAAA	-17	NA	45084030	45071319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
Isoform_163897_98	chr7	-	1593	16	NIC	ENSMUSG00000003868.15	novel	2312	18	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	624.837258812245	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	9162	False	NA	-2	True	TATAAA	-17	NA	45084067	45071319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084043
Isoform_163910_61	chr7	-	1582	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-6	1	intron_retention	FALSE	canonical	3	1951	junction_13	209.501917066259	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	-19	True	NA	-2	True	TATAAA	-17	NA	45083707	45071319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
Isoform_163919_28439	chr7	-	921	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	47	0	2	0	multi-exon	TRUE	canonical	3	56898	junction_1	7359.57672393974	28439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109261	45107367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
Isoform_163933_64	chr7	-	774	6	FSM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	22	5	17	-5	multi-exon	FALSE	canonical	3	256	junction_1	1143.13684220219	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9999	False	NA	-7	True	AATAAA	-17	NA	45116238	45111125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
Isoform_163939_218	chr7	-	1248	5	FSM	ENSMUSG00000003873.12	ENSMUST00000210392.2	1100	5	17	-165	17	-5	multi-exon	FALSE	canonical	3	3046	junction_1	70.515955641259	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9999	False	NA	-7	True	AATAAA	-17	NA	45116238	45111125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643
Isoform_163942_58	chr7	-	1318	5	FSM	ENSMUSG00000003873.12	ENSMUST00000210392.2	1100	5	-53	-165	14	-5	multi-exon	FALSE	canonical	3	3046	junction_1	70.515955641259	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9929	False	NA	-7	True	AATAAA	-17	NA	45116308	45111125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643
Isoform_163946_249	chr7	-	850	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	14	3	14	-3	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATGGTCCCTTGTCCGC	9929	False	NA	-5	True	AATAAA	-19	NA	45116308	45111123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
Isoform_163947_1212	chr7	-	779	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	83	5	16	-5	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9998	False	NA	-7	True	AATAAA	-17	NA	45116239	45111125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
Isoform_163950_108	chr7	-	712	5	NIC	ENSMUSG00000003873.12	novel	867	6	NA	NA	-22	-5	combination_of_known_splicesites	FALSE	canonical	3	105	junction_4	1322.49735349452	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	10013	False	NA	-7	True	AATAAA	-17	NA	45116224	45111125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45116165
Isoform_163957_3	chr7	-	2054	7	FSM	ENSMUSG00000011382.9	ENSMUST00000011526.7	5323	7	7	3262	7	1381	multi-exon	FALSE	canonical	2	18	junction_4	6.73300329224139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACTTAAAGAATCACAA	NA	False	NA	NA	False	NA	NA	NA	45138222	45123672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45124800_45125028_45125177_45128432_45128558_45131212_45131466_45136164_45136329_45137483_45137596_45138097
Isoform_163958_3	chr7	-	1121	7	FSM	ENSMUSG00000011382.9	ENSMUST00000011526.7	5323	7	4	4198	4	445	multi-exon	FALSE	canonical	2	18	junction_4	6.73300329224139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTGTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	45138225	45124608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45124800_45125028_45125177_45128432_45128558_45131212_45131466_45136164_45136329_45137483_45137596_45138097
Isoform_163968_1254	chr7	-	2172	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	32	2649	11	1	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCCTGCCCTCTTCCAAG	NA	False	NA	-3	True	AATAAA	-20	NA	45159798	45142530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
Isoform_163969_409	chr7	-	2414	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	19	2420	-2	230	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGGCTCAGTTGGCA	NA	False	NA	-12	True	ATTAAA	-17	NA	45159811	45142301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
Isoform_163978_1129	chr7	-	2285	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	46	2	46	-2	multi-exon	FALSE	canonical	3	356	junction_2	34	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTACGTGTGTTCTTT	3907	False	NA	42	True	AATAAA	-22	NA	45175646	45172342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45172747_45173162_45174816_45175418
Isoform_163979_42	chr7	-	2338	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	-7	2	-7	-2	multi-exon	FALSE	canonical	3	356	junction_2	34	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTACGTGTGTTCTTT	3854	False	NA	42	True	AATAAA	-22	NA	45175699	45172342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45172747_45173162_45174816_45175418
Isoform_163981_18	chr7	-	2697	2	NIC	ENSMUSG00000040435.13	novel	2333	3	NA	NA	46	-1	intron_retention	FALSE	canonical	3	356	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAACTCTTACGTGTGTT	3907	False	NA	38	True	AATAAA	-18	NA	45175646	45172346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_45174816_45175418
Isoform_163984_3	chr7	-	936	3	FSM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	-5	20	-5	-20	multi-exon	FALSE	canonical	2	3	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAATGTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	45264919	45263329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45263735_45264289_45264394_45264492
Isoform_163986_10	chr7	-	3210	2	FSM	ENSMUSG00000110357.2	ENSMUST00000211533.2	1542	2	-18	-1650	-18	1650	multi-exon	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTCTCTGTGTAGCCCT	10004	False	NA	NA	False	AAAACA	-45	NA	45288207	45283453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45286563_45288106
Isoform_163987_8	chr7	-	2867	2	FSM	ENSMUSG00000055978.6	ENSMUST00000069800.6	2955	2	87	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCATGGTTTTTGTTTGC	9602	False	NA	NA	False	AATAAA	-20	NA	45315731	45298015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45300773_45315621
Isoform_163988_16	chr7	-	2458	4	FSM	ENSMUSG00000040364.9	ENSMUST00000040636.9	2470	4	5	7	5	-7	multi-exon	TRUE	canonical	0	0	junction_3	5.43650214343336	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAATATTTACCCAGCA	NA	False	NA	NA	False	AATAAA	-14	NA	45343821	45327116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45328949_45333603_45333716_45334689_45334780_45343397
Isoform_163989_19	chr7	-	2344	3	NIC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	29	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAATATTTACCCAGCA	NA	False	NA	NA	False	AATAAA	-14	NA	45343797	45327116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_45328949_45333603_45333716_45343397
Isoform_163995_94	chr7	-	2968	6	FSM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	10	-10	10	-8	multi-exon	FALSE	canonical	3	46	junction_5	32.4678302324008	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCCACCCGACATCCC	5967	False	NA	-14	True	AATAAA	-27	NA	45364621	45359698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020
Isoform_164001_9	chr7	-	3327	6	ISM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	60	798	-40	2	intron_retention	FALSE	canonical	3	87	junction_5	18.0554700852678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACATCCCTTTCAGTTAT	3222	False	NA	-4	True	AATAAA	-37	NA	45367366	45359688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416
Isoform_164004_65	chr7	-	2714	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	33	801	33	-1	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	3195	False	NA	-7	True	AATAAA	-34	NA	45367393	45359691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
Isoform_164005_177	chr7	-	2657	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	75	816	-25	2	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTCACCCCTTCCACCC	3237	False	NA	-22	True	AATAAA	-19	NA	45367351	45359706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
Isoform_164007_10	chr7	-	2947	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	72	529	-28	271	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGACGTTCTTCGGGCAC	3234	False	NA	NA	False	TATAAA	-15	NA	45367354	45359419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
Isoform_164008_6	chr7	-	2880	7	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	211	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	43.493294502333	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACATCCCTTTCAGTTA	3473	False	NA	-5	True	AATAAA	-36	NA	45367115	45359689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366682
Isoform_164010_23	chr7	-	2796	8	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	50.0611870512435	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	3263	False	NA	-7	True	AATAAA	-34	NA	45367325	45359691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366682_45366833_45367124
Isoform_164012_7	chr7	-	2844	8	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	51.1899224776255	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCGACATCCCTTTCA	3229	False	NA	-9	True	AATAAA	-32	NA	45367359	45359693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366666_45366833_45367124
Isoform_164014_44	chr7	-	2604	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	-28	1	-28	-1	multi-exon	FALSE	canonical	3	8	junction_5	47.003829631212	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	3234	False	NA	-7	True	AATAAA	-34	NA	45367354	45359691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
Isoform_164016_6	chr7	-	2626	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	-67	18	33	0	multi-exon	FALSE	canonical	3	8	junction_5	47.003829631212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTTCACCCCTTCCAC	3195	False	NA	-24	True	AATAAA	-17	NA	45367393	45359708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
Isoform_164018_4	chr7	-	1198	7	NNC	ENSMUSG00000003271.18	novel	1193	7	NA	NA	-7174	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	2.80871659105879	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTCTGTGCTGACTT	7662	False	NA	NA	False	AATAAA	-18	NA	45399344	45379405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_45379624_45380661_45380843_45383042_45383138_45383410_45383538_45384558_45384768_45391477_45391621_45399119
Isoform_164019_7	chr7	-	2962	12	NIC	ENSMUSG00000003269.18	novel	2519	12	NA	NA	2	29	intron_retention	FALSE	canonical	2	111	junction_4	101.231916046503	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTCATTTCTTGGGT	3173	False	NA	NA	False	NA	NA	NA	45463724	45457003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45458153_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
Isoform_164021_376	chr7	-	1555	12	FSM	ENSMUSG00000003269.18	ENSMUST00000107729.10	2519	12	21	943	-3	29	multi-exon	FALSE	canonical	3	144	junction_4	92.1110540651432	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTCATTTCTTGGGT	3183	False	NA	NA	False	NA	NA	NA	45463714	45457003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
Isoform_164023_131	chr7	-	1578	12	FSM	ENSMUSG00000003269.18	ENSMUST00000107729.10	2519	12	-4	945	1	27	multi-exon	FALSE	canonical	3	144	junction_4	92.1110540651432	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGCCCTCATTTCTTGG	3158	False	NA	NA	False	NA	NA	NA	45463739	45457005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
Isoform_164027_12	chr7	-	1554	12	NNC	ENSMUSG00000003269.18	novel	2527	12	NA	NA	-3	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	132.289502216518	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGCCCTCATTTCTTG	3183	False	NA	NA	False	NA	NA	NA	45463714	45457006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457876_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
Isoform_164028_6	chr7	-	2396	2	ISM	ENSMUSG00000058743.7	ENSMUST00000071937.7	2681	3	4766	2	3328	-2	3prime_fragment	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTTCTGTAGTAAG	5627	False	NA	NA	False	TATAAA	-18	NA	45469440	45465885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_45467637_45468795
Isoform_164032_1963	chr7	-	1890	7	FSM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	4	4	4	-1	multi-exon	FALSE	canonical	3	447	junction_1	34.207292919623	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACAAGTCCTCTGAGCT	8638	False	NA	-8	True	AATAAA	-27	NA	45480209	45474654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
Isoform_164036_53	chr7	-	1770	6	FSM	ENSMUSG00000053801.19	ENSMUST00000209484.2	1783	6	10	3	4	-3	multi-exon	FALSE	canonical	2	14	junction_5	183.663387750526	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTACAAGTCCTCTGAG	8638	False	NA	-10	True	AATAAA	-25	NA	45480209	45474656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45480018
Isoform_164041_24	chr7	-	823	4	FSM	ENSMUSG00000040231.17	ENSMUST00000120299.4	722	4	-40	-61	4	0	multi-exon	FALSE	canonical	3	35	junction_1	18.0616229121921	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCCTGTCTGTTCCTC	NA	False	NA	-3	True	AGTAAA	-29	NA	45546134	45536268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45536550_45538035_45538274_45545114_45545316_45546031
Isoform_164043_29	chr7	-	636	5	FSM	ENSMUSG00000040212.13	ENSMUST00000038876.13	736	5	100	0	-2	0	multi-exon	FALSE	canonical	3	47	junction_4	7.77817459305202	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGCTCCTCTTCCTTC	4458	False	NA	NA	False	AATAAA	-20	NA	45570728	45567446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570665
Isoform_164045_3	chr7	-	891	6	ISM	ENSMUSG00000030838.21	ENSMUST00000176371.2	1865	20	28491	-296	-53	2	3prime_fragment	FALSE	canonical	0	0	junction_2	4.56070170039655	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGCTTCTGGGGGTGAA	NA	False	NA	NA	False	AATAAA	-16	NA	45851247	45844778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_45845159_45846619_45846676_45847776_45847887_45850397_45850498_45850792_45850847_45851056
Isoform_164046_9	chr7	-	1768	11	NIC	ENSMUSG00000030839.13	novel	1465	11	NA	NA	-56	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_10	24.9110417285187	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCCCTGGAGAACCCTT	NA	False	NA	-25	True	AATAAA	-20	NA	46289111	46092592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46288698
Isoform_164047_73	chr7	-	1426	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	22	17	19	0	multi-exon	FALSE	canonical	3	75	junction_10	7.18609768928867	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTCCCTGGAGAACCC	NA	False	NA	-27	True	AATAAA	-18	NA	46289209	46092594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
Isoform_164050_549	chr7	-	1511	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	20	3197	1	-1	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGCATCGGGATGATGG	NA	False	NA	-13	True	AATAAA	-23	NA	46360084	46338728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
Isoform_164051_46	chr7	-	1558	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	20	3150	1	11	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCGTAGTCTGCCCTGAT	NA	False	NA	-18	True	AATGAA	-18	NA	46360084	46338681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
Isoform_164054_10	chr7	-	2051	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	20	2657	1	504	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTGTAAGGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	46360084	46338188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
Isoform_164058_7	chr7	-	1601	13	NNC	ENSMUSG00000006763.15	novel	1849	13	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	181.075241420675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGCATCGGGATGATGG	NA	False	NA	-13	True	AATAAA	-23	NA	46360093	46338728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351606_46351713_46351825_46351917_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
Isoform_164060_33	chr7	-	4613	23	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	12.4724489764871	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	-3	True	AATAAA	-21	NA	46445140	46409894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
Isoform_164062_10	chr7	-	4972	23	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	12.4724489764871	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAACATGGATATGAGAT	NA	False	NA	-4	True	AATAAA	-20	NA	46445500	46409895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
Isoform_164063_17	chr7	-	4495	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107654.8	4422	23	-78	5	-13	-1	multi-exon	FALSE	canonical	2	7	junction_22	14.2782270816457	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	-3	True	AATAAA	-21	NA	46445501	46409894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
Isoform_164064_7	chr7	-	4642	23	FSM	ENSMUSG00000014418.17	ENSMUST00000014562.14	4953	23	306	5	-18	-1	multi-exon	FALSE	canonical	3	17	junction_22	12.9471270625399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	-3	True	AATAAA	-21	NA	46445145	46409894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
Isoform_164068_17	chr7	-	1406	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	10	209	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	371.218746865903	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCTCTTTCTTGGA	NA	False	NA	-37	True	AATAAA	-11	NA	46569707	46539124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558712_46560492_46560559_46563125_46563211_46569568
Isoform_164070_68	chr7	-	1444	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	2	211	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	331.9070969227	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTCTTTCTTGGACT	NA	False	NA	-35	True	AATAAA	-13	NA	46569715	46539122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46560559_46563125_46563211_46569568
Isoform_164074_625	chr7	-	1513	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	10	426	10	211	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTCTTTCTTGGACT	NA	False	NA	-35	True	AATAAA	-13	NA	46569707	46539122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
Isoform_164075_16	chr7	-	1605	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	1	343	1	-265	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCAGTTCAGTATTCT	NA	False	NA	48	True	AATAAA	-21	NA	46569716	46539039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
Isoform_164085_13	chr7	-	1343	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-7	208	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	409.120460280842	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTTTTCTCTTTCTTGG	NA	False	NA	-38	True	AATAAA	-10	NA	46569699	46539125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
Isoform_164087_28	chr7	-	4533	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	77	6	12	-6	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACTATCTGCTGTCTG	NA	False	NA	NA	False	AATAAA	-12	NA	46608198	46572969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
Isoform_164096_12	chr7	-	4253	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	41	322	-14	1	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTGAAAGGAAACTTTC	NA	False	NA	-7	True	AATAAA	-20	NA	46608234	46573285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
Isoform_164099_35	chr7	-	5217	6	FSM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	8	-2	8	2	multi-exon	FALSE	canonical	3	20	junction_2	5.03587132480567	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTTTCATTTATT	9280	False	NA	-3	True	ATTAAA	-17	NA	46658151	46640141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46657822
Isoform_164105_173	chr7	-	3707	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	-16	0	-16	0	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48530805	48516176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
Isoform_164108_97	chr7	-	3591	13	FSM	ENSMUSG00000046179.18	ENSMUST00000119223.2	3499	13	-93	1	-93	-1	multi-exon	FALSE	canonical	3	85	junction_12	21.1073644336126	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACATTTTCATTTGGC	NA	False	NA	-2	True	ATTAAA	-16	NA	48531437	48516177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
Isoform_164112_56	chr7	-	2897	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	163	-7	-7	7	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTAGATGCACGTGCCT	NA	False	NA	-12	True	AATAAA	-24	NA	51655603	51646911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
Isoform_164120_5	chr7	-	3299	8	NIC	ENSMUSG00000030452.17	novel	3925	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	93.4351242787186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	-19	True	AATAAA	-17	NA	55612198	55581033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55594706_55594834_55611199_55611321_55611947
Isoform_164122_229	chr7	-	3173	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	28	-4	2	4	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTTCCCAGCCCAGTG	NA	False	NA	-16	True	AATAAA	-20	NA	55612196	55581030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
Isoform_164130_39	chr7	-	2977	7	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	69.789564644962	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	-19	True	AATAAA	-17	NA	55612199	55581033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55612143
Isoform_164132_18	chr7	-	3046	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	-6	-1	5	1	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	-19	True	AATAAA	-17	NA	55612193	55581033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
Isoform_164133_10	chr7	-	2876	6	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	84.7924524943111	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	-19	True	AATAAA	-17	NA	55612219	55581033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55612143
Isoform_164134_5	chr7	-	2934	5	FSM	ENSMUSG00000047037.6	ENSMUST00000052204.6	3183	5	371	-122	371	122	multi-exon	FALSE	canonical	3	26	junction_2	3.34477204006491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGTGTATCAGTCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	55669331	55627192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_55629652_55635151_55635313_55646181_55646273_55647263_55647312_55669156
Isoform_164135_45	chr7	-	1896	5	FSM	ENSMUSG00000047037.6	ENSMUST00000052204.6	3183	5	368	919	368	-919	multi-exon	FALSE	canonical	3	26	junction_2	3.34477204006491	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTAAGGTTGTTACATT	NA	False	NA	NA	False	AATAAA	-12	NA	55669334	55628233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_55629652_55635151_55635313_55646181_55646273_55647263_55647312_55669156
Isoform_164136_4	chr7	-	6633	3	FSM	ENSMUSG00000100826.7_ENSMUSG00000077191.3	ENSMUST00000188976.2	2193	3	-4441	1	2	-1	multi-exon	FALSE	canonical	3	77	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATAGTTTGTGTTTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	59628620	59619325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_59620292_59621627_59621693_59623018
Isoform_164137_4	chr7	-	2804	3	FSM	ENSMUSG00000100826.7	ENSMUST00000188976.2	2193	3	-612	1	-612	-1	multi-exon	FALSE	canonical	3	77	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATAGTTTGTGTTTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	59624791	59619325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_59620292_59621627_59621693_59623018
Isoform_164140_32	chr7	-	6340	5	ISM	ENSMUSG00000100826.7_ENSMUSG00000077191.3	ENSMUST00000189581.7	6861	12	-3113	32207	2	-1	5prime_fragment	FALSE	canonical	3	50	junction_4	15.4008928312614	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATAGTTTGTGTTTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	59628620	59619325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_59620292_59621627_59621693_59623018_59623399_59623594_59623648_59623744
Isoform_164141_5	chr7	-	1882	4	Fusion	ENSMUSG00000000948.17_ENSMUSG00000100826.7	novel	2193	3	NA	NA	-12	0	intron_retention	FALSE	canonical	1	1	junction_3	38.6810318143431	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATAGTTTGTGTTTTTC	NA	False	NA	-6	True	ATTAAA	-20	NA	59630692	59619324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_59620292_59621627_59621693_59623018_59623399_59630222
Isoform_164144_1820	chr7	-	1311	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	1	620	1	-613	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGTTTTTCTTTGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	59654858	59632862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
Isoform_164145_150	chr7	-	1342	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	-30	620	-30	-613	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGTTTTTCTTTGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	59654889	59632862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
Isoform_164156_13	chr7	-	5229	10	FSM	ENSMUSG00000030525.9	ENSMUST00000032738.7	2078	10	-28	-3123	28	3123	multi-exon	FALSE	canonical	3	9	junction_2	5.31478255248951	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTCAACTATTACTGTT	NA	False	NA	-14	True	AATAAA	-14	NA	62862289	62745316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855_62861996_62862169
Isoform_164157_4	chr7	-	710	5	FSM	ENSMUSG00000030525.9	ENSMUST00000208304.2	2814	5	-18	2122	-18	-2122	multi-exon	FALSE	canonical	3	12	junction_1	6.86931583201704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTGGGTGGTAGGAT	NA	False	NA	NA	False	AATAAA	-18	NA	62862335	62791294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_62791544_62798330_62798441_62809284_62809330_62861855_62861996_62862169
Isoform_164158_244	chr7	-	1432	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	-81	5045	-81	4	multi-exon	FALSE	canonical	3	56	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAATCTCA	NA	False	NA	NA	False	AAAACA	-33	NA	63588744	63541143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_63541546_63587714
Isoform_164159_440	chr7	-	1351	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	0	5045	0	4	multi-exon	FALSE	canonical	3	56	junction_1	0	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAATCTCA	NA	False	NA	NA	False	AAAACA	-33	NA	63588663	63541143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_63541546_63587714
Isoform_164161_30	chr7	-	1471	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	-120	5045	-120	4	multi-exon	FALSE	canonical	3	56	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAATCTCA	NA	False	NA	NA	False	AAAACA	-33	NA	63588783	63541143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_63541546_63587714
Isoform_164179_993	chr7	-	2152	11	FSM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	47	49	15	-49	multi-exon	FALSE	canonical	3	635	junction_4	61.7421250039226	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTGTTGTTTTA	NA	False	NA	0	True	AATAAA	-20	NA	64041969	64026323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
Isoform_164180_164	chr7	-	2188	11	FSM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	47	13	15	-13	multi-exon	FALSE	canonical	3	635	junction_4	61.7421250039226	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTCTTGTACAGGAACG	NA	False	NA	-16	True	NA	NA	NA	64041969	64026287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
Isoform_164183_17	chr7	-	2244	11	FSM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	-46	50	-46	-50	multi-exon	FALSE	canonical	3	635	junction_4	61.7421250039226	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTTCCTGTTGTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	64042062	64026324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
Isoform_164199_186	chr7	-	6895	27	FSM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	-250	-543	-26	0	multi-exon	FALSE	canonical	3	136	junction_1	23.0143060730422	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65021013	64945912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
Isoform_164203_29	chr7	-	6844	27	NIC	ENSMUSG00000030516.15	novel	5938	28	NA	NA	-21	-7	intron_retention	FALSE	canonical	3	35	junction_1	34.2514198729572	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGTATTAGTTTGGT	NA	False	NA	NA	False	AATAAA	-9	NA	65021008	64945919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_64947416_64949456_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
Isoform_164206_23	chr7	-	2222	2	FSM	ENSMUSG00000093405.2	ENSMUST00000176744.2	380	2	-86	-1756	-86	1756	multi-exon	FALSE	canonical	3	34	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTGAATTATGTTCT	NA	False	NA	NA	False	TATAAA	-31	NA	65511826	65508997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_65510986_65511592
Isoform_164208_5	chr7	-	2363	2	FSM	ENSMUSG00000093405.2	ENSMUST00000176744.2	380	2	-246	-1737	-246	1737	multi-exon	FALSE	canonical	3	34	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGATGATTTATATATCAT	NA	False	NA	NA	False	TATAAA	-12	NA	65511986	65509016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_65510986_65511592
Isoform_164209_23	chr7	-	3397	13	FSM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	42	4	42	-4	multi-exon	FALSE	canonical	3	10	junction_1	4.11214326382511	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGATTGTTTTTCATT	NA	False	NA	-4	True	AATAAA	-15	NA	66077223	66040641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_66042510_66048435_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
Isoform_164210_4	chr7	-	3456	13	FSM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	-17	4	-17	-4	multi-exon	FALSE	canonical	3	10	junction_1	4.11214326382511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGATTGTTTTTCATT	NA	False	NA	-4	True	AATAAA	-15	NA	66077282	66040641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_66042510_66048435_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
Isoform_164211_5	chr7	-	1503	7	ISM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	37	17621	37	0	5prime_fragment	FALSE	canonical	3	14	junction_3	2.80871659105879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTCTGGCCTACAACC	NA	False	NA	NA	False	NA	NA	NA	66077228	66058258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
Isoform_164217_27	chr7	-	5032	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	-23	-8	intron_retention	FALSE	canonical	3	29	junction_2	17.1407571465077	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATACTGAATTTGT	NA	False	NA	-10	True	ATTAAA	-24	NA	66339367	66294320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
Isoform_16422_4642	chr11	-	4290	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	132	4	1	-1	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	4642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	100418694	100367182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
Isoform_164220_3	chr7	-	4938	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	9	-7	intron_retention	FALSE	canonical	3	10	junction_4	29.7587522139846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACTGAATTTGTG	NA	False	NA	-9	True	ATTAAA	-25	NA	66339286	66294319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66337631_66337707_66338570_66338669_66338847
Isoform_164225_18	chr7	-	4921	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	0	7	0	-7	multi-exon	FALSE	canonical	3	23	junction_2	20.3273215156351	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACTGAATTTGTG	NA	False	NA	-9	True	ATTAAA	-25	NA	66339344	66294319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
Isoform_164227_3	chr7	-	2105	5	NIC	ENSMUSG00000030509.18	novel	2137	6	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	50	junction_1	11.9687092035858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTTGTTCATCTTAGT	NA	False	NA	NA	False	AATAAA	-24	NA	66339267	66326772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
Isoform_164230_7	chr7	-	3262	11	FSM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	30	-816	-1	442	multi-exon	FALSE	canonical	3	15	junction_6	11.6120626935958	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAAGGCGTTATTTAA	NA	False	NA	NA	False	TATAAA	-16	NA	67022576	66883138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
Isoform_164231_3	chr7	-	5485	11	FSM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	33	-3042	2	-2	multi-exon	FALSE	canonical	3	15	junction_6	11.6120626935958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGACTCTGTCATGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	67022573	66880912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
Isoform_164236_16	chr7	-	5398	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	30	-669	-1	-86	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTTAAGACAATGCTTG	NA	False	NA	NA	False	AATAAA	-23	NA	67022576	66880996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
Isoform_164237_5	chr7	-	5482	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	29	-752	-2	-3	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCAGACTCTGTCATGT	NA	False	NA	NA	False	AGTAAA	-21	NA	67022577	66880913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
Isoform_164244_31	chr7	-	2826	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	574	False	NA	-2	True	AATAAA	-16	NA	67294977	67163157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
Isoform_164249_28	chr7	-	2899	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	24	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	596	False	NA	-2	True	AATAAA	-16	NA	67294955	67163157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
Isoform_164252_3	chr7	-	2879	9	NIC	ENSMUSG00000030556.14	novel	2761	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	26.9092804623238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCTTCTCTCCTCCT	573	False	NA	-4	True	AATAAA	-14	NA	67294978	67163159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67290851_67291089_67294925
Isoform_164253_3	chr7	-	1410	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	2	-474	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	26.9092804623238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGGACGTGTTGTCTT	574	False	NA	NA	False	AATACA	-11	NA	67294977	67164627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67290851_67291089_67294925
Isoform_164254_11	chr7	-	2689	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	20.648471493067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	599	False	NA	-2	True	AATAAA	-16	NA	67294952	67163157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
Isoform_164256_3	chr7	-	2771	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	26.9162474167556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	548	False	NA	-2	True	AATAAA	-16	NA	67295003	67163157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_67164927_67179333_67179494_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
Isoform_164263_1073	chr7	-	3875	8	FSM	ENSMUSG00000042659.16	ENSMUST00000048068.15	3905	8	31	-1	-22	1	multi-exon	FALSE	canonical	3	375	junction_1	213.33809518495	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGGCTCATTTTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	68398958	68386741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
Isoform_164264_126	chr7	-	3909	8	FSM	ENSMUSG00000042659.16	ENSMUST00000048068.15	3905	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	375	junction_1	213.33809518495	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGTGGCTCATTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	68398993	68386742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
Isoform_164275_216	chr7	-	1065	5	FSM	ENSMUSG00000042659.16	ENSMUST00000118110.3	1129	5	-22	86	-22	-86	multi-exon	FALSE	canonical	3	754	junction_4	68.2289344779764	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGCGATTGCAAATGT	NA	False	NA	-17	True	ATTAAA	-22	NA	68398958	68391344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
Isoform_164281_4	chr7	-	4041	5	ISM	ENSMUSG00000078671.12	ENSMUST00000199809.5	5289	15	21274	3	-80	-3	3prime_fragment	FALSE	canonical	3	20	junction_2	3.67423461417477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTGTACTTTTTTGA	8160	False	NA	-12	True	ATTAAA	-16	NA	73097061	73076444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_73079749_73085482_73085727_73091333_73091548_73093982_73094083_73096882
Isoform_164282_5	chr7	-	4628	32	NNC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.525659953557	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGCAGAAGAAGAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	73191494	73101559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105522_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
Isoform_164287_3	chr7	-	3629	14	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	22216	61972	-15961	9097	internal_fragment	FALSE	canonical	3	31	junction_10	5.66417162846311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTTAATGAGTTGAACA	NA	False	NA	NA	False	NA	NA	NA	73169278	73138357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224
Isoform_164288_17	chr7	-	2786	16	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	2	63625	1	7444	5prime_fragment	FALSE	canonical	3	19	junction_14	8.62142035217451	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGAAACTTTCTGATG	NA	False	NA	-7	True	NA	NA	NA	73191492	73140010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
Isoform_164291_7	chr7	-	2681	15	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	0	7445	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	12.7585505542322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAACTTTCTGATGT	NA	False	NA	-6	True	NA	NA	NA	73191494	73140009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
Isoform_164294_44	chr7	-	1008	5	ISM	ENSMUSG00000078671.12	ENSMUST00000026895.14	1571	9	-1	13117	0	-6207	5prime_fragment	FALSE	canonical	3	19	junction_3	11.146748404804	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTAAGTCTTTATC	NA	False	NA	-7	True	NA	NA	NA	73191494	73163844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
Isoform_164295_3	chr7	-	1607	2	FSM	ENSMUSG00000078671.12	ENSMUST00000200218.2	1387	2	-221	1	0	-1	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGTTGTATGACTGT	NA	False	NA	NA	False	AATAAA	-12	NA	73191494	73189546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_73190653_73190993
Isoform_164298_12	chr7	-	765	5	FSM	ENSMUSG00000101970.9	ENSMUST00000187421.7	519	5	-22	-224	-22	2	multi-exon	FALSE	canonical	3	58	junction_4	79.8780320238299	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTCTCAGTTTGGGCC	NA	False	NA	-10	True	AATAAA	-15	NA	73207743	73193787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207522
Isoform_164299_52	chr7	-	1028	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	-128	4240	-128	1	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTCTCAGTTTGGGC	NA	False	NA	-11	True	AATAAA	-14	NA	73208271	73193788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
Isoform_164301_4	chr7	-	1135	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	-235	4240	-235	1	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTCTCAGTTTGGGC	NA	False	NA	-11	True	AATAAA	-14	NA	73208378	73193788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
Isoform_164302_5	chr7	-	1163	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	-128	4105	-128	130	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGGTTTTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	73208271	73193653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
Isoform_164304_3	chr7	-	5399	6	FSM	ENSMUSG00000025789.10	ENSMUST00000026896.10	5368	6	-33	2	-17	-2	multi-exon	FALSE	canonical	2	7	junction_2	2.31516738055805	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGGGTGTCTATAGAG	NA	False	NA	NA	False	NA	NA	NA	73663455	73588868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_73593213_73610439_73610734_73616488_73616747_73621665_73621795_73626405_73626469_73663144
Isoform_164305_14	chr7	-	1387	3	FSM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	-8	-723	-8	-1	multi-exon	FALSE	canonical	3	19	junction_1	6.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGTAGTGGTCTTGCC	NA	False	NA	-1	True	NA	NA	NA	75431855	75418786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_75419986_75430372_75430505_75431799
Isoform_164307_4	chr7	-	2660	17	FSM	ENSMUSG00000059146.13	ENSMUST00000039431.14	19703	17	599	16444	-20	4	multi-exon	FALSE	canonical	1	2	junction_5	14.7690554877419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAAGAA	NA	False	NA	NA	False	TATAAA	-36	NA	78227557	77842150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
Isoform_164308_18	chr7	-	3801	14	FSM	ENSMUSG00000059146.13	ENSMUST00000039438.9	3977	14	173	3	-20	-3	multi-exon	FALSE	canonical	3	25	junction_10	6.48804088737217	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTGCATCAGACCTC	NA	False	NA	NA	False	AATAAA	-18	NA	78227557	77950440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
Isoform_164309_9	chr7	-	4396	14	FSM	ENSMUSG00000059146.13	ENSMUST00000039438.9	3977	14	-422	3	-1	-3	multi-exon	FALSE	canonical	3	25	junction_10	6.48804088737217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTGCATCAGACCTC	NA	False	NA	NA	False	AATAAA	-18	NA	78228152	77950440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
Isoform_164311_4	chr7	-	3884	15	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-6825	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	10.0315827794633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGCATCAGACCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	78235271	77950439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78235178
Isoform_164312_6	chr7	-	3819	15	NNC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	10.2342462310796	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGCATCAGACCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	78228152	77950439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78228124
Isoform_164313_10	chr7	-	3652	14	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-6856	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	10.4036861924287	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGCATCAGACCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	78235302	77950439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78235178
Isoform_164314_5	chr7	-	4267	13	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-3	-4	intron_retention	FALSE	canonical	2	6	junction_1	10.1680326951131	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGACTGCATCAGACCT	NA	False	NA	NA	False	AATAAA	-17	NA	78228159	77950441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_77952496_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
Isoform_164315_414	chr7	-	978	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	50	106	50	-106	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGATTTGTCCTTGGTG	NA	False	NA	-6	True	ATTAAA	-21	NA	78432787	78425089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
Isoform_164318_79	chr7	-	1140	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	50	-56	50	56	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCTGATAGTTTCTGG	NA	False	NA	NA	False	AAAAAG	-22	NA	78432787	78424927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
Isoform_164322_3	chr7	-	2555	5	NIC	ENSMUSG00000030610.14	novel	2269	5	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	41.3098051314697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCTTCCTTGATG	NA	False	NA	-1	True	AATAAA	-20	NA	78496959	78477219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_78477861_78483858_78484051_78489752_78489941_78492583_78494013_78496854
Isoform_164323_130	chr7	-	2240	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	32	-3	32	1	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCTTCCTTGATGT	NA	False	NA	0	True	AATAAA	-21	NA	78496979	78477218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
Isoform_164324_20	chr7	-	2076	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	-3	196	-3	-196	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCATTTTATGTCTGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	78497014	78477417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
Isoform_164325_5	chr7	-	1446	5	FSM	ENSMUSG00000030606.9	ENSMUST00000206092.2	3358	5	-9	1921	-9	-3	multi-exon	FALSE	canonical	2	5	junction_4	1.87082869338697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCTTAATTCTCCTGG	2266	False	NA	NA	False	NA	NA	NA	78780775	78766770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_78767242_78767596_78767900_78771394_78771764_78773117_78773300_78780654
Isoform_164326_4	chr7	-	1544	5	FSM	ENSMUSG00000030606.9	ENSMUST00000206092.2	3358	5	-137	1951	-137	-33	multi-exon	FALSE	canonical	2	5	junction_4	1.87082869338697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATTATTATTATTTTA	2138	False	NA	NA	False	TTTAAA	-27	NA	78780903	78766800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_78767242_78767596_78767900_78771394_78771764_78773117_78773300_78780654
Isoform_164336_1645	chr7	-	2114	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	12	-1	5	0	multi-exon	TRUE	canonical	3	296	junction_6	379.595691346581	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	-5	True	AATACA	-19	NA	78798796	78783515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
Isoform_164337_95	chr7	-	2135	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	-11	1	-11	-1	multi-exon	FALSE	canonical	3	296	junction_6	379.595691346581	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCTGTGCCTCCTCAT	NA	False	NA	-7	True	AATACA	-17	NA	78798819	78783517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
Isoform_164342_4763	chr7	-	2003	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	5	0	5	0	multi-exon	FALSE	canonical	3	790	junction_6	144.155948541848	4763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	-5	True	AATACA	-19	NA	78798796	78783515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
Isoform_164348_16	chr7	-	1844	9	FSM	ENSMUSG00000039194.17	ENSMUST00000179243.3	2142	9	305	-7	-138	7	multi-exon	FALSE	canonical	3	11	junction_8	4.45638586749397	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATGAACTTAGGTCTT	NA	False	NA	-8	True	AATAAA	-29	NA	79036491	79024610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
Isoform_164349_3	chr7	-	1798	9	NNC	ENSMUSG00000039194.17	novel	2142	9	NA	NA	-136	8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	6.8818148042504	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGAACTTAGGTCTTA	NA	False	NA	-7	True	AATAAA	-30	NA	79036489	79024609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_79025467_79025644_79025711_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
Isoform_164356_280	chr7	-	4334	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	166	3337	-2	-5	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACAGTTGTGCTTTCCC	NA	False	NA	-6	True	AATAAA	-18	NA	79115944	79099315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
Isoform_164357_8	chr7	-	4593	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	93	3151	-71	0	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79116017	79099129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
Isoform_164358_60	chr7	-	5018	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	140	2679	-24	471	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAGACAGTTGGATAA	NA	False	NA	-7	True	AATAAA	-19	NA	79115970	79098657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
Isoform_164359_273	chr7	-	4520	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	166	3151	-2	0	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115944	79099129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
Isoform_164362_8	chr7	-	7673	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	163	1	-1	-1	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTTTTGATCATGGT	NA	False	NA	1	True	NA	NA	NA	79115947	79095979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
Isoform_164374_47	chr7	-	1989	11	FSM	ENSMUSG00000030549.7	ENSMUST00000032766.5	2090	11	101	0	101	0	multi-exon	FALSE	canonical	2	10	junction_10	3.38969025133566	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGGAGTGGATGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	79267304	79243110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79243549_79244529_79244737_79248288_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
Isoform_164375_9	chr7	-	4559	19	FSM	ENSMUSG00000050382.15	ENSMUST00000184137.2	4093	19	-37	-429	14	0	multi-exon	FALSE	canonical	3	10	junction_6	12.416262732679	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGCTTACATCTTAAA	NA	False	NA	-1	True	AATAAA	-14	NA	79365454	79347846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352028_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
Isoform_164376_3	chr7	-	4578	19	NNC	ENSMUSG00000050382.15	novel	4093	19	NA	NA	-4	3	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	13.0692599467436	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTACATCTTAAATATG	NA	False	NA	3	True	AATAAA	-18	NA	79365472	79347842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352028_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357423_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
Isoform_164377_33	chr7	-	4563	19	FSM	ENSMUSG00000050382.15	ENSMUST00000183846.8	4577	19	14	0	14	0	multi-exon	FALSE	canonical	3	29	junction_12	9.36634374031449	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCTTACATCTTAAAT	NA	False	NA	0	True	AATAAA	-15	NA	79365454	79347845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
Isoform_164378_13	chr7	-	4559	19	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	10.3147981913557	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGCTTACATCTTAAA	NA	False	NA	-1	True	AATAAA	-14	NA	79365454	79347846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357423_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
Isoform_164379_5	chr7	-	4588	19	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	12.7898493702459	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGCTTACATCTTAAA	NA	False	NA	-1	True	AATAAA	-14	NA	79365483	79347846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356634_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
Isoform_164380_4	chr7	-	4562	19	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	13.4412301024373	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGCTTACATCTTAAA	NA	False	NA	-1	True	AATAAA	-14	NA	79365460	79347846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356634_79356736_79356853_79357267_79357423_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
Isoform_164381_56	chr7	-	2241	3	FSM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTCTGTGAGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	79392828	79385704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79387659_79389912_79390029_79392657
Isoform_164385_15	chr7	-	5777	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	30	6	-23	-6	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCCTCTGTGGCCATG	NA	False	NA	-8	True	AATAAA	-8	NA	79570367	79525078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
Isoform_164386_22	chr7	-	3414	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	3	2396	3	-2396	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGGGGTTTTGGGTCTA	NA	False	NA	NA	False	NA	NA	NA	79570394	79527468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
Isoform_164388_14	chr7	-	5806	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	8	-1	8	1	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGCCATGCATTTCA	NA	False	NA	-1	True	AATAAA	-15	NA	79570389	79525071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
Isoform_164390_100	chr7	-	1371	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	9	4433	9	2753	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCAGTGCTGTGCTGTG	NA	False	NA	-1	True	AATACA	-20	NA	79570388	79529505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
Isoform_164395_8	chr7	-	4484	3	NNC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	-23	-29204	intron_retention	TRUE	non_canonical	0	0	junction_1	147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79570367	79561462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_79564818_79564837_79565856_79570256
Isoform_164396_4	chr7	-	1770	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	50	457	50	-457	multi-exon	FALSE	canonical	3	36	junction_1	5.76194411635517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCCAGACCGTATTT	9943	False	NA	45	True	NA	NA	NA	79585057	79575565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
Isoform_164398_4	chr7	-	1566	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	52	659	52	-659	multi-exon	FALSE	canonical	3	36	junction_1	5.76194411635517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTGCTGTCCTAAAG	9945	False	NA	NA	False	NA	NA	NA	79585055	79575767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
Isoform_164416_2547	chr7	-	1668	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	74	3	14	1	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	2547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGATGTGTTTG	NA	False	NA	-8	True	AAAAAG	-10	NA	79765066	79744596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
Isoform_164417_388	chr7	-	1715	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	27	3	27	1	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGATGTGTTTG	NA	False	NA	-8	True	AAAAAG	-10	NA	79765113	79744596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
Isoform_164431_66	chr7	-	2346	9	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	14	1	intron_retention	FALSE	canonical	3	1616	junction_4	183.33980575696	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGATGTGTTTG	NA	False	NA	-8	True	AAAAAG	-10	NA	79765066	79744596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
Isoform_164444_398	chr7	-	823	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	213	11	-3	1	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCCTTGTATGATGGTA	2264	False	NA	-11	True	AATAAA	-16	NA	79882348	79876905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
Isoform_164445_38	chr7	-	979	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	56	12	-26	0	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2107	False	NA	-12	True	AATAAA	-15	NA	79882505	79876906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
Isoform_164446_158	chr7	-	874	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	164	9	-25	3	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTATGATGGTAGC	2215	False	NA	-9	True	AATAAA	-18	NA	79882397	79876903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
Isoform_164449_18	chr7	-	781	6	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	305.980130073833	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCCTTGTATGATGGTA	2271	False	NA	-11	True	AATAAA	-16	NA	79882341	79876905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882257
Isoform_164452_25	chr7	-	712	5	FSM	ENSMUSG00000030538.16	ENSMUST00000071457.12	702	5	-7	-3	-7	3	multi-exon	FALSE	canonical	3	77	junction_4	297.709904941035	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTATGATGGTAGC	2233	False	NA	-9	True	AATAAA	-18	NA	79882379	79876903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79882257
Isoform_164455_18	chr7	-	761	6	ISM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	213	680	-3	5	5prime_fragment	FALSE	canonical	3	721	junction_1	52.8446780669539	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTGAACTTCTGGTTT	2264	False	NA	NA	False	NA	NA	NA	79882348	79877574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
Isoform_164458_3	chr7	-	1921	9	FSM	ENSMUSG00000038930.12	ENSMUST00000047362.11	3336	9	262	1153	-9	0	multi-exon	FALSE	canonical	3	15	junction_3	12.4197423483742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGACAAAGCTTACAAG	NA	False	NA	NA	False	NA	NA	NA	79973910	79966490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970049_79970447_79970609_79970930_79971024_79971092_79973497
Isoform_164459_9	chr7	-	925	3	ISM	ENSMUSG00000030533.17	ENSMUST00000238999.2	3180	20	13678	-2	13073	1	3prime_fragment	FALSE	canonical	3	89	junction_1	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTGTTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	79976241	79975041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_79975626_79975760_79975917_79976056
Isoform_164462_333	chr7	-	3241	20	FSM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	20	-1	2	1	multi-exon	TRUE	canonical	3	61	junction_19	11.9833679753749	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTGTTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	79989947	79975041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
Isoform_164463_16	chr7	-	3287	20	FSM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	-28	1	-28	0	multi-exon	FALSE	canonical	3	61	junction_19	11.9833679753749	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTGTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	79989995	79975043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
Isoform_164465_209	chr7	-	3198	20	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	16.1947975641576	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTGTTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	79989949	79975041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
Isoform_164466_25	chr7	-	3280	20	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	-64	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	16.1947975641576	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTGTTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	79990031	79975041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
Isoform_164469_3	chr7	-	6617	25	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	43	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	22.7814190856399	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGATGTGCAGTGAAGTT	4044	False	NA	-3	True	AATAAA	-18	NA	80021080	79998846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_79999222_79999263_80000870_80000890_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009384_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479
Isoform_164470_22	chr7	-	6372	26	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	119	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.0217411267478	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCAGTGAAGTTACTT	4120	False	NA	1	True	AATAAA	-22	NA	80021004	79998842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_79999222_79999265_80000870_80000890_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
Isoform_164471_10	chr7	-	6449	26	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	44	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.0217411267478	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCAGTGAAGTTACTT	4045	False	NA	1	True	AATAAA	-22	NA	80021079	79998842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_79999222_79999263_80000870_80000890_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
Isoform_164474_3	chr7	-	955	5	ISM	ENSMUSG00000053158.11	ENSMUST00000206728.2	2707	18	7366	-12	383	2	3prime_fragment	FALSE	canonical	2	10	junction_1	2.77263412660235	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGATATTGACATGTGTG	NA	False	NA	-7	True	AATAAA	-17	NA	80029801	80027508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565
Isoform_164475_5	chr7	-	1279	9	ISM	ENSMUSG00000053158.11	ENSMUST00000206728.2	2707	18	5648	-10	-1335	0	3prime_fragment	FALSE	canonical	2	3	junction_5	4.31385848168435	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTGATATTGACATGTG	NA	False	NA	-9	True	AATAAA	-15	NA	80031519	80027510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80031348
Isoform_164476_3	chr7	-	1613	11	ISM	ENSMUSG00000053158.11	ENSMUST00000080932.8	2762	19	5220	0	-2290	0	3prime_fragment	FALSE	canonical	2	3	junction_5	4.68614980554399	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTGACATGTGTGCTC	NA	False	NA	-4	True	AATAAA	-20	NA	80032474	80027505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80031348_80031559_80032060_80032145_80032268
Isoform_164483_164	chr7	-	4305	16	FSM	ENSMUSG00000030530.16	ENSMUST00000122232.8	4286	16	-21	2	-21	0	multi-exon	FALSE	canonical	3	55	junction_15	14.0469055508876	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGTCTCCAGTGTCT	3658	False	NA	-2	True	ATTAAA	-20	NA	80052531	80038943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
Isoform_164491_465	chr7	-	4485	22	FSM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	14	99	14	0	multi-exon	FALSE	canonical	3	335	junction_6	41.4509518092853	465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184853	80104839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
Isoform_164498_7	chr7	-	3578	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	-4	1541	-4	-1541	multi-exon	FALSE	canonical	0	0	junction_3	5.85757838102026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAGGCCTGGTTCATG	1593	False	NA	NA	False	NA	NA	NA	80338629	80237915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
Isoform_1645_5	chr10	-	2661	13	FSM	ENSMUSG00000062866.17	ENSMUST00000105545.12	8556	13	37	5858	37	-180	multi-exon	FALSE	canonical	2	11	junction_9	15.1657508881031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGCTTGCTCGCACTG	NA	False	NA	NA	False	ATTAAA	-28	NA	13350119	13089318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13131053_13131066_13137509_13137669_13142716_13142798_13167538_13167707_13349799
Isoform_164501_6	chr7	-	5127	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	-12	0	-12	0	multi-exon	TRUE	canonical	0	0	junction_3	5.85757838102026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTGTTTCTCTTCAGC	1585	False	NA	NA	False	ATTAAA	-26	NA	80338637	80236374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
Isoform_16451_6846	chr11	-	4260	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	132	1	1	-1	multi-exon	FALSE	canonical	3	2198	junction_15	363.337822300204	6846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	100418694	100367182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
Isoform_164564_640	chr7	-	7318	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	124	2	-11	-2	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATTTTTCTTGG	NA	False	NA	-11	True	AATAAA	-17	NA	80453040	80361332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
Isoform_164568_63	chr7	-	7348	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	96	0	-39	0	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTATTTTTCTTGGTT	NA	False	NA	-9	True	AATAAA	-19	NA	80453068	80361330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
Isoform_164586_5	chr7	-	2552	7	FSM	ENSMUSG00000025722.17	ENSMUST00000139990.8	2549	7	-2	-1	0	0	multi-exon	FALSE	canonical	3	120	junction_4	7.94599829404014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80550982	80540470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
Isoform_164589_7	chr7	-	1770	8	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	49	4	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	45.3332332932069	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAGCAATTTACTTA	NA	False	NA	-3	True	AATAAA	-24	NA	80550918	80541004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550643
Isoform_164590_4	chr7	-	2303	8	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	45.3332332932069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80550917	80540470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550643
Isoform_164591_62	chr7	-	2079	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	35	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80550982	80540470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
Isoform_164592_122	chr7	-	1550	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	35	529	0	9	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAATTTACTTAGTTTT	NA	False	NA	2	True	AATAAA	-29	NA	80550982	80540999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
Isoform_164593_5	chr7	-	1929	6	NIC	ENSMUSG00000025722.17	novel	2549	7	NA	NA	0	4	intron_retention	FALSE	canonical	3	13	junction_4	49.9935995903476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAGCAATTTACTTA	NA	False	NA	-3	True	AATAAA	-24	NA	80550982	80541004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391
Isoform_164595_6	chr7	-	1992	7	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	46.1173021278951	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTGTGTGTATGAG	NA	False	NA	-4	True	AATAAA	-15	NA	80550985	80540471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391_80550460_80550932
Isoform_164596_7	chr7	-	3013	6	FSM	ENSMUSG00000025722.17	ENSMUST00000135905.8	3080	6	65	2	50	-2	multi-exon	FALSE	canonical	3	120	junction_3	8.49941174435031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAGCAATTAGCAATT	NA	False	NA	-9	True	AATAAA	-18	NA	80550917	80541010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
Isoform_164597_5	chr7	-	3087	6	FSM	ENSMUSG00000025722.17	ENSMUST00000135905.8	3080	6	-3	-4	-3	4	multi-exon	FALSE	canonical	3	120	junction_3	8.49941174435031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAGCAATTTACTTA	NA	False	NA	-3	True	AATAAA	-24	NA	80550985	80541004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
Isoform_164598_14	chr7	-	2616	7	FSM	ENSMUSG00000025722.17	ENSMUST00000152518.8	3142	7	-5	531	-3	6	multi-exon	FALSE	canonical	3	95	junction_6	17.3365381652611	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAGCAATTTACTTAGT	NA	False	NA	-1	True	AATAAA	-26	NA	80550985	80541002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
Isoform_164599_8	chr7	-	3147	7	FSM	ENSMUSG00000025722.17	ENSMUST00000152518.8	3142	7	-4	-1	-2	0	multi-exon	FALSE	canonical	3	95	junction_6	17.3365381652611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80550984	80540470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
Isoform_164602_6	chr7	-	712	3	FSM	ENSMUSG00000025723.13	ENSMUST00000026817.11	705	3	-13	6	-13	0	multi-exon	FALSE	canonical	2	13	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAATGTCTGGGCCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	80554837	80551981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80552252_80553881_80554055_80554568
Isoform_164604_549	chr7	-	921	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	236	188	1	1	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCCAGTGTTTGTATT	1621	False	NA	-10	True	ATTAAA	-12	NA	80597292	80565312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
Isoform_164605_165	chr7	-	1126	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	218	1	-17	-1	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTTCCCTGAATTCTG	1603	False	NA	-6	True	AATAAA	-17	NA	80597310	80565125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
Isoform_164606_41	chr7	-	1124	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	33	188	-5	1	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCCAGTGTTTGTATT	1418	False	NA	-10	True	ATTAAA	-12	NA	80597495	80565312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
Isoform_164607_14	chr7	-	1336	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	8	1	8	-1	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTTCCCTGAATTCTG	1393	False	NA	-6	True	AATAAA	-17	NA	80597520	80565125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
Isoform_164619_4950	chr7	-	461	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	27	6	0	1	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	4950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTTTGTCTGTATTG	NA	False	NA	-16	True	AATAAA	-6	NA	80994975	80992486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
Isoform_164620_75	chr7	-	558	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	-70	6	-70	1	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTTTGTCTGTATTG	NA	False	NA	-16	True	AATAAA	-6	NA	80995072	80992486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
Isoform_164627_11	chr7	-	3173	12	FSM	ENSMUSG00000025586.18	ENSMUST00000098331.10	3111	12	-64	2	-64	0	multi-exon	FALSE	canonical	3	28	junction_5	13.4250290487089	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81104570	80996775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
Isoform_164628_11	chr7	-	3109	12	FSM	ENSMUSG00000025586.18	ENSMUST00000098331.10	3111	12	1	1	1	-1	multi-exon	FALSE	canonical	3	28	junction_5	13.4250290487089	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81104505	80996774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
Isoform_164630_27	chr7	-	3094	12	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	10.3116719552358	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81104505	80996774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
Isoform_164631_25	chr7	-	3153	12	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	10.3116719552358	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTTTTGTCTCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	81104563	80996773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
Isoform_164632_7	chr7	-	3242	12	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	18.2548533114207	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81105232	80996775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104959
Isoform_164633_4	chr7	-	3142	12	NIC	ENSMUSG00000025586.18	novel	1777	12	NA	NA	-44	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_10	18.5343103771633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81104550	80996774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021952_81085950_81086126_81104381
Isoform_164634_6	chr7	-	5358	10	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	48	junction_6	9.89325746202314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81104520	80996774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
Isoform_164635_4	chr7	-	2578	18	ISM	ENSMUSG00000062444.16	ENSMUST00000238711.2	3230	25	16751	-233	1482	-1	3prime_fragment	FALSE	canonical	3	56	junction_15	11.7210956418324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGCTCACCTTTCCTT	NA	False	NA	0	True	AATAAA	-16	NA	81126676	81110147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488
Isoform_164637_4	chr7	-	2787	19	ISM	ENSMUSG00000062444.16	ENSMUST00000238711.2	3230	25	16390	-231	1121	-3	3prime_fragment	FALSE	canonical	3	56	junction_15	11.3920049937567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGGCTCACCTTTCC	NA	False	NA	-2	True	AATAAA	-14	NA	81127037	81110149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693
Isoform_164638_12	chr7	-	3499	23	ISM	ENSMUSG00000062444.16	ENSMUST00000082090.15	3806	26	9139	3	5024	-3	3prime_fragment	FALSE	canonical	3	56	junction_15	11.3023803533987	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGGCTCACCTTTCC	NA	False	NA	-2	True	AATAAA	-14	NA	81134534	81110149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173
Isoform_164642_90	chr7	-	3657	26	NIC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_25	13.1209755734854	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	NA	False	NA	-1	True	AATAAA	-15	NA	81139556	81110148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81139285
Isoform_164644_68	chr7	-	3584	26	FSM	ENSMUSG00000062444.16	ENSMUST00000082090.15	3806	26	220	2	1	-2	multi-exon	FALSE	canonical	3	16	junction_25	15.5434873821804	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	7860	False	NA	-1	True	AATAAA	-15	NA	81143453	81110148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
Isoform_164645_31	chr7	-	3815	26	FSM	ENSMUSG00000062444.16	ENSMUST00000082090.15	3806	26	-11	2	-11	-2	multi-exon	FALSE	canonical	3	16	junction_25	15.5434873821804	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	7629	False	NA	-1	True	AATAAA	-15	NA	81143684	81110148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
Isoform_164646_3	chr7	-	582	3	ISM	ENSMUSG00000061877.14	ENSMUST00000144156.2	640	6	2475	-2	2465	2	3prime_fragment	FALSE	canonical	1	3	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGGATGTTGGAGGTTCT	5759	False	NA	NA	False	ATTAAA	-18	NA	81145554	81144020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_81144127_81144873_81145122_81145326
Isoform_164647_48	chr7	-	2114	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	8	-386	8	386	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATATAAGCAGAACTTA	NA	False	NA	NA	False	NA	NA	NA	81356684	81259091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_164649_5	chr7	-	1790	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	-69	15	-69	-15	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAATAATTGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	81356761	81259492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_164650_3	chr7	-	2191	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	-61	-394	-61	394	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGAACTTAGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	81356753	81259083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_164651_28	chr7	-	2146	9	FSM	ENSMUSG00000025813.15	ENSMUST00000207983.2	1634	9	-125	-387	-9	387	multi-exon	FALSE	canonical	3	22	junction_5	5.73230974389905	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATATAAGCAGAACTTAG	NA	False	NA	NA	False	NA	NA	NA	81356682	81259090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268464_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_164653_7	chr7	-	2216	9	FSM	ENSMUSG00000025813.15	ENSMUST00000207983.2	1634	9	-195	-387	-60	387	multi-exon	FALSE	canonical	3	22	junction_5	5.73230974389905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATATAAGCAGAACTTAG	NA	False	NA	NA	False	NA	NA	NA	81356752	81259090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268464_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_164655_10	chr7	-	975	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTAGCAGTTTCGAGT	NA	False	NA	99	True	AATAAA	-15	NA	81439213	81431931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
Isoform_164656_17	chr7	-	875	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	-102	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAATGTCAGTTATTT	NA	False	NA	-1	True	AGTAAA	-17	NA	81439213	81432031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
Isoform_164657_44	chr7	-	772	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	13	102	0	-102	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAATGTCAGTTATTT	NA	False	NA	-1	True	AGTAAA	-17	NA	81439213	81432031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
Isoform_164658_19	chr7	-	873	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	13	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTAGCAGTTTCGAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	81439213	81431930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
Isoform_164661_4	chr7	-	782	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	106.699051073569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTAGCAGTTTCGAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	81439195	81431930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439175
Isoform_164663_39	chr7	-	3140	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	316.438555449553	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGTCACCTCTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	81479212	81441822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
Isoform_164668_908	chr7	-	3034	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-33	0	-33	0	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	81479212	81441821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
Isoform_164680_5	chr7	-	5809	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	77	1	63	-1	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTTGTGACTGTCAGA	NA	False	NA	-3	True	AATAAA	-13	NA	81584144	81530999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
Isoform_164682_3	chr7	-	2284	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	-164	3767	-164	-3767	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGGAGTAAGGTTTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	81584385	81534765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
Isoform_164690_2279	chr7	-	2427	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	-192	3	-192	-3	multi-exon	FALSE	canonical	3	1379	junction_1	80.5	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCGTGGGCTTATGTGC	NA	False	NA	-10	True	AATAAA	-15	NA	83801293	83758566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_83760010_83763458_83763639_83800489
Isoform_1647_4	chr10	-	3047	13	FSM	ENSMUSG00000062866.17	ENSMUST00000105545.12	8556	13	-157	5666	-157	12	multi-exon	FALSE	canonical	2	11	junction_9	15.1657508881031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGGAAACCGTTCTT	NA	False	NA	6	True	AATAAA	-33	NA	13350313	13089126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13131053_13131066_13137509_13137669_13142716_13142798_13167538_13167707_13349799
Isoform_164701_45	chr7	-	2528	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	-292	2	-292	-2	multi-exon	FALSE	canonical	3	1379	junction_1	80.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCGTGGGCTTATGTGCT	NA	False	NA	-9	True	AATAAA	-16	NA	83801393	83758565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_83760010_83763458_83763639_83800489
Isoform_164702_100	chr7	-	2465	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	-228	1	-228	-1	multi-exon	FALSE	canonical	3	1379	junction_1	80.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGTGGGCTTATGTGCTC	NA	False	NA	-8	True	AATAAA	-17	NA	83801329	83758564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_83760010_83763458_83763639_83800489
Isoform_164709_6	chr7	-	6198	19	FSM	ENSMUSG00000015709.10	ENSMUST00000085077.5	6151	19	-47	0	10	0	multi-exon	FALSE	canonical	1	1	junction_5	2.23123173644702	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCTTGGACTGGCT	NA	False	NA	2	True	AATAAA	-20	NA	84059374	83895485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_83899363_83900573_83900711_83911600_83911752_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549_83996764_84003727_84003776_84010761_84010877_84059062
Isoform_164711_67	chr7	-	1423	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	156	6	-57	-6	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATCTCTGTTCTTGGT	NA	False	NA	-10	True	AATAAA	-26	NA	84254994	84234372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
Isoform_164713_28	chr7	-	1539	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	35	11	-3	-11	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACAGAAATCTCTGTTC	NA	False	NA	-15	True	AATAAA	-21	NA	84255115	84234377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
Isoform_164716_14	chr7	-	1509	7	NIC	ENSMUSG00000030629.16	novel	1538	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_6	272.686429601638	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTACGTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	84328573	84264260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84328517
Isoform_164718_112	chr7	-	1587	7	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	150	junction_5	197.190615620746	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTACGTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	84339087	84264260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84338953
Isoform_164724_31	chr7	-	1721	8	FSM	ENSMUSG00000030629.16	ENSMUST00000209165.2	967	8	32	-786	32	-1	multi-exon	FALSE	canonical	3	64	junction_6	270.713795702534	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAGCTACGTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	84339059	84264262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84338953
Isoform_164725_54	chr7	-	1539	7	FSM	ENSMUSG00000030629.16	ENSMUST00000178385.9	1538	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	57	junction_6	230.002475832085	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84328601	84264261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
Isoform_164726_397	chr7	-	1575	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	93	1287	19	1	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTACGTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	84339072	84264260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
Isoform_164728_27	chr7	-	1689	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	-21	1287	-19	1	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTACGTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	84339186	84264260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
Isoform_164734_26	chr7	-	4479	6	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	18	0	intron_retention	FALSE	canonical	3	577	junction_4	72.676268478782	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84339073	84264261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_84265177_84267057_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
Isoform_164739_117	chr7	-	3356	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	27	317	0	-317	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTGCATTTCTGTGAG	NA	False	NA	-9	True	AGTAAA	-14	NA	88987968	88789238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
Isoform_164741_130	chr7	-	3197	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	27	476	0	-476	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCCTCTCAGGTTTTA	NA	False	NA	-14	True	ATTAAA	-32	NA	88987968	88789397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
Isoform_164742_16	chr7	-	3672	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	27	1	0	-1	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGGGTTTTATTTCCA	NA	False	NA	NA	False	AATAAA	-23	NA	88987968	88788922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
Isoform_164747_205	chr7	-	1049	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	16	1159	11	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590396	89567895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
Isoform_164748_10	chr7	-	2242	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTACCTTGACAGTGG	NA	False	NA	-14	True	AATAAA	-17	NA	89590430	89566736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
Isoform_164750_224	chr7	-	1012	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	53	1159	12	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590359	89567895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
Isoform_164753_14	chr7	-	2169	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	55	0	14	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTACCTTGACAGTGG	NA	False	NA	-14	True	AATAAA	-17	NA	89590357	89566736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
Isoform_164758_150	chr7	-	774	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	48	-16	12	0	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590359	89567895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
Isoform_164759_55	chr7	-	801	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	21	-16	-13	0	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590386	89567895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
Isoform_164760_14	chr7	-	590	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	-3	219	2	-3	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATGAAGTCAAAAGGG	NA	False	NA	-13	True	AATAAA	-21	NA	89590410	89568130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
Isoform_164770_1031	chr7	-	1970	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	11	79	11	-73	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTTATTTTTATTG	NA	False	NA	-11	True	AATAAA	-15	NA	89630173	89603940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_164771_87	chr7	-	2082	12	FSM	ENSMUSG00000030619.11	ENSMUST00000107234.3	2067	12	-14	-1	-14	1	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAGAAAGCTATTTACT	NA	False	NA	-1	True	AATAAA	-34	NA	89630205	89603860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_164772_322	chr7	-	2028	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	11	21	11	-15	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGTAATGTTTACTT	NA	False	NA	-23	True	AATAAA	-12	NA	89630173	89603882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_164773_251	chr7	-	2002	12	FSM	ENSMUSG00000030619.11	ENSMUST00000107234.3	2067	12	-14	79	-14	-73	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTTATTTTTATTG	NA	False	NA	-11	True	AATAAA	-15	NA	89630205	89603940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_164774_467	chr7	-	1643	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	418	-1	1	1	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAGAAAGCTATTTACT	NA	False	NA	-1	True	AATAAA	-34	NA	89629766	89603860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_164775_1323	chr7	-	1564	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	143	-204	0	-73	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTTATTTTTATTG	NA	False	NA	-11	True	AATAAA	-15	NA	89629767	89603940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_164795_239	chr7	-	1881	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	11	-73	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTTATTTTTATTG	NA	False	NA	-11	True	AATAAA	-15	NA	89630173	89603940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_164796_310	chr7	-	1474	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	1	-73	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTTATTTTTATTG	NA	False	NA	-11	True	AATAAA	-15	NA	89629766	89603940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_164797_71	chr7	-	1947	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	10	-8	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTTTACTTTAACTCT	NA	False	NA	-16	True	AATAAA	-19	NA	89630174	89603875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_164798_103	chr7	-	1558	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGCTATTTACTTTGA	NA	False	NA	3	True	AATAAA	-38	NA	89629766	89603856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_16480_2060	chr11	-	1780	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	550	0	2	0	multi-exon	FALSE	canonical	3	2240	junction_1	249.671049855795	2060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5932	False	NA	-21	True	AATAAA	-15	NA	100510444	100473643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
Isoform_164820_3	chr7	-	382	2	FSM	ENSMUSG00000097162.3	ENSMUST00000209166.2	271	2	-97	-14	-53	5	multi-exon	FALSE	canonical	3	49	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAAATGTCTGACGCTC	NA	False	NA	1	True	AATAAA	-31	NA	89779245	89774024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89774241_89779079
Isoform_164823_386	chr7	-	758	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	30	11	9	1	multi-exon	FALSE	canonical	3	739	junction_4	32.5297940356222	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATCTTGTCTGCAACA	1675	False	NA	NA	False	AATAAA	-8	NA	90106407	90099918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
Isoform_164826_5	chr7	-	847	6	NNC	ENSMUSG00000030615.13	novel	799	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	375.952656593885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1673	False	NA	NA	False	AATAAA	-7	NA	90106409	90099919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90105779_90105868_90106279
Isoform_164827_40	chr7	-	734	5	FSM	ENSMUSG00000030615.13	ENSMUST00000136652.8	756	5	11	11	11	1	multi-exon	FALSE	canonical	3	71	junction_2	308.308591349641	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATCTTGTCTGCAACA	1677	False	NA	NA	False	AATAAA	-8	NA	90106405	90099918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_90100144_90100750_90100866_90101936_90102109_90104631_90104728_90106279
Isoform_164828_8	chr7	-	572	4	FSM	ENSMUSG00000030615.13	ENSMUST00000207159.2	466	4	-106	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	346.691345275432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1666	False	NA	NA	False	AATAAA	-7	NA	90106416	90099919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_90100144_90100750_90100866_90104631_90104728_90106279
Isoform_164829_10	chr7	-	1807	4	NIC	ENSMUSG00000030615.13	novel	799	5	NA	NA	9	1	intron_retention	FALSE	canonical	3	739	junction_3	32.6904675198546	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATCTTGTCTGCAACA	1675	False	NA	NA	False	AATAAA	-8	NA	90106407	90099918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_90100144_90100750_90102109_90104631_90104728_90106279
Isoform_16483_34	chr11	-	1878	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	452	0	-57	0	multi-exon	FALSE	canonical	3	2240	junction_1	249.671049855795	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5834	False	NA	-21	True	AATAAA	-15	NA	100510542	100473643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
Isoform_164830_9	chr7	-	2414	3	NIC	ENSMUSG00000030615.13	novel	799	5	NA	NA	9	1	intron_retention	FALSE	canonical	3	739	junction_2	40	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATCTTGTCTGCAACA	1675	False	NA	NA	False	AATAAA	-8	NA	90106407	90099918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_90102109_90104631_90104728_90106279
Isoform_164832_54	chr7	-	2244	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	9	6	3	-6	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAGAATGCATGGAGG	6029	False	NA	NA	False	NA	NA	NA	90125200	90116651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
Isoform_164834_58	chr7	-	2127	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	9	123	3	-123	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGATTTTTTTTCTATT	6029	False	NA	NA	False	NA	NA	NA	90125200	90116768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
Isoform_164839_5	chr7	-	2652	4	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	3	-6	intron_retention	FALSE	canonical	3	242	junction_2	12.657891697365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAGAATGCATGGAGG	6029	False	NA	NA	False	NA	NA	NA	90125200	90116651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_90118890_90119972_90120167_90121805_90121928_90125102
Isoform_164840_11	chr7	-	2750	12	FSM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	32	0	-8	0	multi-exon	FALSE	canonical	2	2	junction_3	4.22702834093188	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTACTACTACTAATA	NA	False	NA	NA	False	AATAAA	-17	NA	92286318	92233390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
Isoform_164841_9	chr7	-	2709	9	ISM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	26	20437	14	317	5prime_fragment	FALSE	canonical	2	4	junction_3	3.40725329260975	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGAGCCTCCGGGTAACT	NA	False	NA	NA	False	NA	NA	NA	92286324	92253827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
Isoform_164849_15	chr7	-	5677	16	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	-1	5	intron_retention	FALSE	canonical	3	46	junction_9	61.6724681955679	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGAGTGTAATATTTATG	NA	False	NA	-1	True	NA	NA	NA	92319143	92293462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
Isoform_164850_6	chr7	-	6438	16	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	0	81	intron_retention	FALSE	canonical	3	46	junction_9	61.6724681955679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTACAGTGTGAAACCT	NA	False	NA	NA	False	AATAAA	-14	NA	92319111	92292669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
Isoform_164853_59	chr7	-	5794	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	31	170	0	-170	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGTTTGTATTTCTTG	NA	False	NA	-3	True	AATAAA	-15	NA	92319111	92292920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
Isoform_164855_8	chr7	-	6045	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	31	-81	0	81	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTACAGTGTGAAACCT	NA	False	NA	NA	False	AATAAA	-14	NA	92319111	92292669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
Isoform_164859_197	chr7	-	3451	7	FSM	ENSMUSG00000030641.11	ENSMUST00000208356.2	840	7	10	-2621	5	-3	multi-exon	FALSE	canonical	3	86	junction_4	58.4648517392193	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTTTTTGTTATAA	NA	False	NA	-4	True	AGTAAA	-15	NA	92523435	92506735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92521969_92522053_92523348
Isoform_164861_248	chr7	-	3364	6	FSM	ENSMUSG00000030641.11	ENSMUST00000032877.11	3387	6	20	3	5	-3	multi-exon	FALSE	canonical	3	123	junction_4	35.6168499449348	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTTTTTGTTATAA	NA	False	NA	-4	True	AGTAAA	-15	NA	92523435	92506735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
Isoform_164864_6	chr7	-	4346	11	FSM	ENSMUSG00000035713.16	ENSMUST00000139582.9	4262	11	-111	27	-111	-1	multi-exon	FALSE	canonical	2	4	junction_5	1.83303027798234	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCAGGATGCTGTT	NA	False	NA	-1	True	AATAAA	-15	NA	96981338	96958613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498_96975268_96981043
Isoform_164865_34	chr7	-	1083	2	FSM	ENSMUSG00000035686.9	ENSMUST00000043077.8	1277	2	199	-5	-12	5	multi-exon	FALSE	canonical	3	27	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGGTCTTTTATTTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	97066738	97062139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97062723_97066238
Isoform_164866_20	chr7	-	870	5	FSM	ENSMUSG00000035642.17	ENSMUST00000154853.8	883	5	11	2	1	-2	multi-exon	FALSE	canonical	3	45	junction_3	23.5902522241709	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAGTTGAGAGCATT	NA	False	NA	NA	False	AATAAA	-20	NA	97228692	97199548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97228572
Isoform_164869_30	chr7	-	767	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	11	11	0	-2	multi-exon	FALSE	canonical	3	37	junction_3	30.4740326617051	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAGTTGAGAGCATT	NA	False	NA	NA	False	AATAAA	-20	NA	97228693	97199548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
Isoform_164871_4	chr7	-	3510	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	215	12	-136	-12	multi-exon	FALSE	canonical	3	30	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAGAAATTTAATGT	NA	False	NA	NA	False	NA	NA	NA	97387281	97373224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97375912_97378177_97378295_97386575
Isoform_164873_20	chr7	-	1154	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	210	2373	-141	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTAGTAACTGTGAT	NA	False	NA	-1	True	ATTAAA	-43	NA	97387286	97375585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97375912_97378177_97378295_97386575
Isoform_164875_11	chr7	-	3466	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	263	8	-88	-8	multi-exon	FALSE	canonical	3	30	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATTTAATGTGTAT	NA	False	NA	NA	False	NA	NA	NA	97387233	97373220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97375912_97378177_97378295_97386575
Isoform_164883_6	chr7	-	4363	12	ISM	ENSMUSG00000035547.15	ENSMUST00000107112.2	2232	13	129	-2095	-3	-7	3prime_fragment	FALSE	canonical	3	136	junction_9	15.0651477817495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGATCTGTCTGTTTCA	NA	False	NA	-6	True	AATAAA	-16	NA	97811420	97770772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122
Isoform_164887_98	chr7	-	4432	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	60	6	60	-6	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGATCTGTCTGTTTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	97827421	97770771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
Isoform_164895_8	chr7	-	4360	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	385	-8	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_12	45.2980101353495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97813784	97770773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97813683
Isoform_164897_6	chr7	-	4499	14	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	47	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	59.1501949458341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97827434	97770773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97826769_97826826_97827250
Isoform_164898_4	chr7	-	4846	12	NIC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	55	-4	intron_retention	FALSE	canonical	3	136	junction_8	15.3966831246106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCTGTCTGTTTCATTT	NA	False	NA	-3	True	AATAAA	-19	NA	97827426	97770769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
Isoform_164899_89	chr7	-	3876	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	42	7422	10	-153	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGTTTTGGAAGAAAA	NA	False	NA	-2	True	AATAAA	-17	NA	97958703	97863017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
Isoform_1649_6	chr10	-	2539	12	FSM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	14	182	14	-182	multi-exon	FALSE	canonical	3	9	junction_11	13.2378121085581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCATGCTTGCTCGCAC	9916	False	NA	NA	False	ATTAAA	-26	NA	13200019	13089320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13199807
Isoform_164900_15	chr7	-	1345	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	3	9992	3	62	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGATTTACATTCTTAT	NA	False	NA	14	True	NA	NA	NA	97958742	97865587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
Isoform_164902_3	chr7	-	1510	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	0	9830	0	224	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGATTTTGTCTTGGAC	NA	False	NA	NA	False	AGTAAA	-39	NA	97958745	97865425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
Isoform_164903_130	chr7	-	1249	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	41	10050	9	4	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTGGCAAAATACCATAT	NA	False	NA	-44	True	ATTAAA	-20	NA	97958704	97865645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
Isoform_164906_9	chr7	-	1422	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	3	9915	3	139	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGCTATCTGCCTT	NA	False	NA	91	True	AATAAA	-26	NA	97958742	97865510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
Isoform_164910_15	chr7	-	2665	3	FSM	ENSMUSG00000049580.13	ENSMUST00000164726.8	2620	3	-46	1	-6	-1	multi-exon	FALSE	canonical	2	4	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCATTTGCTGACAAAT	NA	False	NA	1	True	AATAAA	-29	NA	98010541	97999875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98002338_98008564_98008675_98010448
Isoform_164912_81	chr7	-	2508	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	1	-199	1	-1	multi-exon	FALSE	canonical	3	40	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCATTTGCTGACAAAT	NA	False	NA	1	True	AATAAA	-29	NA	98010494	97999875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98002338_98010448
Isoform_164913_50	chr7	-	2617	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	-111	-196	-71	-4	multi-exon	FALSE	canonical	3	40	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTAGCATTTGCTGACA	NA	False	NA	-2	True	AATAAA	-26	NA	98010606	97999878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98002338_98010448
Isoform_164916_3	chr7	-	4240	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-20	-14	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	21.478198699858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	3482	False	NA	NA	False	NA	NA	NA	98306010	98239820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
Isoform_164917_4	chr7	-	5273	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-12	-571	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	19.5153144991312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATGTTGAACTGTATA	3709	False	NA	-4	True	TATAAA	-17	NA	98305783	98238713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
Isoform_164918_3	chr7	-	4129	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	14	-14	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	21.2537759395772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	3704	False	NA	NA	False	NA	NA	NA	98305788	98239820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
Isoform_164919_8	chr7	-	4029	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	185	3479	1	-16	multi-exon	FALSE	canonical	3	39	junction_14	16.3198636678896	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAGAAAAAAAAAAAA	3691	False	NA	NA	False	NA	NA	NA	98305801	98239822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
Isoform_164920_4	chr7	-	5704	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	184	1805	0	-6	multi-exon	TRUE	canonical	3	39	junction_14	16.3198636678896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATGGATCAGGAAATAAG	3690	False	NA	NA	False	AATAAA	-15	NA	98305802	98238148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
Isoform_164921_4	chr7	-	5074	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-7	-570	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	18.2976082900417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTGAACTGTATAT	3714	False	NA	-3	True	TATAAA	-18	NA	98305778	98238712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
Isoform_164923_286	chr7	-	3430	15	FSM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	1	1726	1	3	multi-exon	FALSE	canonical	3	139	junction_11	14.4016722385043	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTTCCCCCCCAGCTT	NA	False	NA	-15	True	AATAAA	-22	NA	98790347	98535953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
Isoform_164929_19	chr7	-	3393	14	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_12	45.2728741753235	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGATTTCCCCCCCAGC	NA	False	NA	-17	True	AATAAA	-20	NA	98790347	98535955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98767394_98767513_98790040
Isoform_164930_23	chr7	-	2863	10	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-15775	3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	49.6083425879255	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTTCCCCCCCAGCTT	NA	False	NA	-15	True	AATAAA	-22	NA	98681626	98535953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681413
Isoform_164931_15	chr7	-	2918	10	NNC	ENSMUSG00000035354.10	novel	3147	11	NA	NA	-15775	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	50.8374315287903	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	-18	True	AATAAA	-19	NA	98681626	98535956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681355
Isoform_164932_12	chr7	-	2780	10	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-15775	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	50.8374315287903	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGATTTCCCCCCC	NA	False	NA	-20	True	AATAAA	-17	NA	98681626	98535958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681491
Isoform_164934_5	chr7	-	3332	14	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.2432467482819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	-18	True	AATAAA	-19	NA	98790344	98535956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_98537800_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
Isoform_164938_285	chr7	-	2262	8	FSM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	10.965623464226	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGTTGCTTAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	98831926	98802864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98818904_98819034_98831598
Isoform_164940_9	chr7	-	1742	5	ISM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	5874	2	5849	-2	3prime_fragment	FALSE	canonical	3	105	junction_3	4.43705983732471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCCTTCTTTTCTCTCT	NA	False	NA	-3	True	AATAAA	-18	NA	98881952	98868292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664
Isoform_164941_215	chr7	-	1777	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	2	1	2	-1	multi-exon	FALSE	canonical	3	105	junction_3	4.4	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTTCTTTTCTCTCTC	NA	False	NA	-2	True	AATAAA	-19	NA	98887824	98868291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
Isoform_164943_3	chr7	-	2315	5	NIC	ENSMUSG00000052396.8	novel	1780	6	NA	NA	2	-3	intron_retention	FALSE	canonical	3	105	junction_2	4.12310562561766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCCCTTCTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-17	NA	98887824	98868293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_98869167_98871459_98872375_98872707_98872913_98881664_98881844_98887681
Isoform_164966_139	chr7	-	2092	6	FSM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	0	36	0	-36	multi-exon	FALSE	canonical	3	30	junction_5	741.154936568596	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGGTGTGTGAAAGCAG	NA	False	NA	48	True	AATAAA	-18	NA	99002321	98994637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99002259
Isoform_164973_83	chr7	-	2131	5	FSM	ENSMUSG00000070436.13	ENSMUST00000169437.9	2274	5	91	52	-26	-33	multi-exon	FALSE	canonical	3	46	junction_4	667.492462504259	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002230	98994634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088
Isoform_164978_145	chr7	-	2217	5	NIC	ENSMUSG00000070436.13	novel	2274	5	NA	NA	0	-33	intron_retention	FALSE	canonical	3	88	junction_4	649.473777376731	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002321	98994634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002093
Isoform_164984_5139	chr7	-	2051	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	125	39	0	-33	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	5139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002321	98994634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
Isoform_164985_662	chr7	-	2166	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	10	39	10	-33	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002436	98994634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
Isoform_164987_558	chr7	-	2092	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	126	-3	1	3	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTAAGACAAAGCCT	NA	False	NA	93	True	ATTAAA	-20	NA	99002320	98994592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
Isoform_1650_4	chr10	-	2723	12	FSM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	12	0	12	0	multi-exon	FALSE	canonical	3	9	junction_11	13.2378121085581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTATCTCCAAAGTCAG	9914	False	NA	-6	True	AATAAA	-21	NA	13200021	13089138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13199807
Isoform_165002_15138	chr7	-	829	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	86	993	-1	4	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	15138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAAGGCCTGACTGGAT	8421	False	NA	-41	True	AATAAA	-29	NA	99132859	99128095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
Isoform_165003_166	chr7	-	1819	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	87	2	0	-2	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCATGAGTATGCAATTA	8422	False	NA	-14	True	AATAAA	-27	NA	99132858	99127104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
Isoform_165011_7	chr7	-	3919	14	FSM	ENSMUSG00000030737.18	ENSMUST00000107088.8	4369	14	427	23	427	-23	multi-exon	FALSE	canonical	0	0	junction_5	2.1483446221183	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACTCTTCCACGACAA	NA	False	NA	NA	False	ATTAAA	-13	NA	99355941	99307618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090_99335325_99338069_99338233_99339638_99339777_99340963_99341101_99355717
Isoform_165014_9	chr7	-	3300	3	FSM	ENSMUSG00000035239.7	ENSMUST00000036331.7	3341	3	39	2	39	-2	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTTGGAGTGAGTTAG	6064	False	NA	NA	False	AATAAA	-13	NA	99477585	99460647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_99463515_99472528_99472741_99477364
Isoform_165023_995	chr7	-	1489	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	83	1337	5	-2	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	995	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGGAGTCTTGAAAGA	NA	False	NA	-5	True	AATAAA	-16	NA	99508101	99488112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
Isoform_165028_12	chr7	-	7144	6	FSM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	0	3	0	-3	multi-exon	FALSE	canonical	3	16	junction_4	4.83321838943783	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGACTATTTCTGATCA	NA	False	NA	-4	True	AGTAAA	-17	NA	99629655	99569463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
Isoform_165038_771	chr7	-	2989	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	80	0	-19	0	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770692	99731317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
Isoform_165044_20	chr7	-	2933	11	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	178.454924280615	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770692	99731317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99770570
Isoform_165046_148	chr7	-	2983	12	NNC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_4	154.789059343876	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTGGTGCGAGTTGGA	NA	False	NA	-6	True	AATAAA	-16	NA	99770685	99731319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742692_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
Isoform_165054_748	chr7	-	2429	14	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	105	junction_12	74.9147049500395	748	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGAGGAGCTGTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	100021171	99975943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100020929
Isoform_165059_4	chr7	-	680	3	ISM	ENSMUSG00000030708.15	ENSMUST00000054923.9	847	7	6967	-63	6967	5	3prime_fragment	FALSE	canonical	3	56	junction_2	3	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGGGAAGTGAGTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	100154021	100152222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_100152518_100153122_100153200_100153713
Isoform_165060_7	chr7	-	2299	7	ISM	ENSMUSG00000030708.15	ENSMUST00000130534.8	1159	8	1572	-1306	-46	1	3prime_fragment	FALSE	canonical	3	16	junction_5	19.1020650425259	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTGTGCCATACACAT	NA	False	NA	NA	False	NA	NA	NA	100161034	100150921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100156582_100156741_100159901_100160064_100160956
Isoform_165061_16	chr7	-	1003	7	ISM	ENSMUSG00000030708.15	ENSMUST00000130534.8	1159	8	1572	-10	-46	10	3prime_fragment	FALSE	canonical	3	16	junction_5	19.1020650425259	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTGAGTTGGAGGGA	NA	False	NA	1	True	AATAAA	-23	NA	100161034	100152217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100156582_100156741_100159901_100160064_100160956
Isoform_165062_29	chr7	-	842	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	2969	-67	-46	7	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGGAAGTGAGTTGGAG	NA	False	NA	-2	True	AATAAA	-20	NA	100161034	100152220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
Isoform_165063_12	chr7	-	2110	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	3000	-1366	-15	1	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTGTGCCATACACAT	NA	False	NA	NA	False	NA	NA	NA	100161003	100150921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
Isoform_165065_6	chr7	-	1325	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	0	2960	0	-2	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTCTGTATTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	100232309	100197917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
Isoform_165066_3	chr7	-	4295	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	-9	-1	-1	1	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTGCTTGAGTGGAT	NA	False	NA	NA	False	ATTAAA	-12	NA	100232318	100194956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
Isoform_165067_4	chr7	-	916	8	NIC	ENSMUSG00000030706.18	novel	4285	8	NA	NA	-32	117	combination_of_known_junctions	FALSE	canonical	1	13	junction_7	166.611487464406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTTTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	100256877	100198326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100256764
Isoform_165069_3	chr7	-	1904	8	FSM	ENSMUSG00000030701.18	ENSMUST00000116287.9	1911	8	8	-1	8	0	multi-exon	FALSE	canonical	1	2	junction_3	7.51868420968044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGGCTTTGCTTGTTTT	NA	False	NA	-1	True	AATAAA	-17	NA	100307655	100293105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100294277_100294776_100294877_100299134_100299240_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100307499
Isoform_165070_11	chr7	-	1801	7	FSM	ENSMUSG00000030701.18	ENSMUST00000107044.10	1806	7	8	-3	8	1	multi-exon	FALSE	canonical	3	13	junction_3	4.3365372770859	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTTGCTTGTTTTGT	NA	False	NA	1	True	AATAAA	-19	NA	100307655	100293103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100307499
Isoform_165072_3	chr7	-	2729	11	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	39	-323	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	11.8105884696742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2245	False	NA	-3	True	AATAAA	-15	NA	100512566	100495376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512212
Isoform_165073_3	chr7	-	2488	11	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	33	-330	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	11.8105884696742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCGTCATGAGGTGCT	2479	False	NA	-10	True	AATAAA	-8	NA	100512332	100495383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512212
Isoform_165074_5	chr7	-	2957	11	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	10.0179838290946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACGAGCTTTTTTTCTG	2233	False	NA	NA	False	NA	NA	NA	100512578	100495054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512318
Isoform_165075_25	chr7	-	2626	11	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	36	-323	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	10.0179838290946	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2242	False	NA	-3	True	AATAAA	-15	NA	100512569	100495376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512318
Isoform_165076_104	chr7	-	2488	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	40	323	0	-323	multi-exon	FALSE	canonical	3	27	junction_8	6.09590026165127	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2198	False	NA	-3	True	AATAAA	-15	NA	100512613	100495376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
Isoform_165077_12	chr7	-	2829	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	16	6	16	-6	multi-exon	FALSE	canonical	3	27	junction_8	6.09590026165127	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGAACGAGCTTTTT	2174	False	NA	NA	False	NA	NA	NA	100512637	100495059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
Isoform_165078_3	chr7	-	2565	10	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	16	-322	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	15.0636509600732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGAGGTGCTTCCTTTCC	2222	False	NA	-2	True	AATAAA	-16	NA	100512589	100495375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512318
Isoform_165079_7	chr7	-	2410	10	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	-4	-323	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	13.2310894636482	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2194	False	NA	-3	True	AATAAA	-15	NA	100512617	100495376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
Isoform_165080_3	chr7	-	4617	21	FSM	ENSMUSG00000032875.9	ENSMUST00000209041.2	4516	21	-102	1	-102	-1	multi-exon	FALSE	canonical	0	0	junction_20	5.07346035758633	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGATGGCTCCCCCGGG	6750	False	NA	-14	True	AATAAA	-10	NA	100543999	100521342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100543649
Isoform_165082_12	chr7	-	2571	3	FSM	ENSMUSG00000032860.6	ENSMUST00000037540.5	3011	3	-19	459	-19	1	multi-exon	FALSE	canonical	2	2	junction_1	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACAACTGGTTCTT	3084	False	NA	NA	False	AATACA	-28	NA	100661224	100646233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100648308_100652770_100652962_100660918
Isoform_165083_7	chr7	-	3006	3	FSM	ENSMUSG00000032860.6	ENSMUST00000037540.5	3011	3	5	0	-2	0	multi-exon	FALSE	canonical	2	2	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCATTTTGTTG	3108	False	NA	NA	False	ATTAAA	-19	NA	100661200	100645774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100648308_100652770_100652962_100660918
Isoform_165084_6	chr7	-	2126	18	FSM	ENSMUSG00000047767.18	ENSMUST00000120267.9	6459	18	37	4296	0	0	multi-exon	FALSE	canonical	2	4	junction_10	9.70606060442378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCCTCTTTGAAGCA	8414	False	NA	-2	True	NA	NA	NA	100951258	100938823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100944065_100944129_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
Isoform_165085_44	chr7	-	2064	17	FSM	ENSMUSG00000047767.18	ENSMUST00000122116.8	2083	17	20	-1	0	1	multi-exon	FALSE	canonical	3	10	junction_10	7.54750579661917	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCCTCTTTGAAGCAT	8414	False	NA	-1	True	NA	NA	NA	100951258	100938822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
Isoform_16509_53	chr11	-	3238	18	FSM	ENSMUSG00000020918.15	ENSMUST00000153526.8	2946	18	-294	2	-2	-2	multi-exon	FALSE	canonical	3	22	junction_12	124.621058832359	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATTGTTTTTTGGGG	6777	False	NA	-3	True	AATAAA	-16	NA	100603293	100595573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601075_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
Isoform_165095_7	chr7	-	4776	29	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	3	16	junction_28	32.913228529649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAATAAAGGAAAAG	NA	False	NA	26	True	AATAAA	-15	NA	101487021	101471866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486871
Isoform_165096_136	chr7	-	4725	29	FSM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	-16	21	-16	-7	multi-exon	FALSE	canonical	3	95	junction_28	22.1558429663829	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAATAAAGGAAAAG	NA	False	NA	26	True	AATAAA	-15	NA	101487026	101471866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
Isoform_165100_3	chr7	-	5262	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-24	-39	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_28	28.1340631655664	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATCACCTTAATAAATT	NA	False	NA	-6	True	AATAAA	-22	NA	101487034	101471898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
Isoform_165101_4	chr7	-	4698	29	NNC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	35.2749224387698	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGGAAAA	NA	False	NA	25	True	AATAAA	-14	NA	101487432	101471867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487359
Isoform_165103_11	chr7	-	4603	28	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-28	-7	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	36.3932567353139	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAATAAAGGAAAAG	NA	False	NA	26	True	AATAAA	-15	NA	101487038	101471866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101472611_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
Isoform_165105_17	chr7	-	944	4	FSM	ENSMUSG00000001827.13	ENSMUST00000106981.8	960	4	-2	18	-2	-18	multi-exon	FALSE	canonical	3	303	junction_2	18.9267594221045	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCCTTATGAATTATT	8096	False	NA	-18	True	AATAAA	-13	NA	101513354	101507555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131
Isoform_165107_7	chr7	-	1036	5	FSM	ENSMUSG00000001827.13	ENSMUST00000106982.8	1039	5	1	2	1	-2	multi-exon	FALSE	canonical	3	16	junction_4	136.80711787038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGGTGTGAATGAGAA	4837	False	NA	-2	True	AATAAA	-29	NA	101516613	101507539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101516484
Isoform_165110_47	chr7	-	1212	5	ISM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	1965	18	-51	-18	3prime_fragment	FALSE	canonical	3	257	junction_4	35.4788669492136	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCCTTATGAATTATT	3525	False	NA	-18	True	AATAAA	-13	NA	101517925	101507555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604
Isoform_165112_3	chr7	-	1017	6	NIC	ENSMUSG00000001827.13	novel	1307	7	NA	NA	-33	-21	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	121.999344260533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATGTGCCTTATGAATT	3192	False	NA	-21	True	AATAAA	-10	NA	101518258	101507558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517675_101518199
Isoform_165113_26	chr7	-	1130	6	ISM	ENSMUSG00000001827.13	ENSMUST00000106983.8	1307	7	1465	16	-1	-16	3prime_fragment	FALSE	canonical	3	52	junction_5	108.542341968469	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTATGAATTATTTG	2920	False	NA	-16	True	AATAAA	-15	NA	101518530	101507553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517675_101518363
Isoform_165115_5	chr7	-	1143	6	NIC	ENSMUSG00000001827.13	novel	1286	7	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	123.544971569061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTATTTGGGTGTGAAT	2919	False	NA	-7	True	AATAAA	-24	NA	101518531	101507544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517678_101518363
Isoform_165116_16	chr7	-	1087	6	NIC	ENSMUSG00000001827.13	novel	1286	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	123.544971569061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	3227	False	NA	0	True	AATAAA	-31	NA	101518223	101507537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517759_101518199
Isoform_165117_31	chr7	-	1245	6	ISM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	1329	16	-30	-16	3prime_fragment	FALSE	canonical	3	40	junction_5	113.141327550988	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTATGAATTATTTG	2889	False	NA	-16	True	AATAAA	-15	NA	101518561	101507553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517759_101518363
Isoform_165121_3	chr7	-	815	5	FSM	ENSMUSG00000064307.14	ENSMUST00000106966.8	821	5	-2	8	-2	3	multi-exon	FALSE	canonical	2	4	junction_1	3.93700393700591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGATTATAAGTCCCC	2523	False	NA	NA	False	AATAAA	-14	NA	101583077	101562204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101562420_101562641_101562791_101564768_101564975_101569843_101569982_101582970
Isoform_165122_4	chr7	-	1122	5	FSM	ENSMUSG00000064307.14	ENSMUST00000106964.8	872	5	-82	-168	11	0	multi-exon	FALSE	canonical	1	2	junction_3	5.43139024560011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAAGTCCCCTGTACCTT	2509	False	NA	NA	False	AATAAA	-22	NA	101583091	101562196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101562791_101564768_101564975_101569843_101569982_101570710_101570774_101582970
Isoform_165124_3	chr7	-	998	4	NIC	ENSMUSG00000064307.14	novel	821	5	NA	NA	7	0	intron_retention	FALSE	canonical	2	8	junction_3	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAAGTCCCCTGTACCTT	2570	False	NA	NA	False	AATAAA	-22	NA	101583030	101562196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101562791_101564768_101564975_101569843_101569982_101582970
Isoform_165125_22	chr7	-	2181	9	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	14	7	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	120.056692337412	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGCATTTGCCTTTTTT	NA	False	NA	-8	True	AATAAA	-26	NA	101714351	101668351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101714272
Isoform_165128_331	chr7	-	2239	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	4	6	4	-6	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCATTTGCCTTTTTTTT	NA	False	NA	-6	True	AATAAA	-28	NA	101714361	101668349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
Isoform_165131_24	chr7	-	2353	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	0	-9	0	-6	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCATTTGCCTTTTTTTT	NA	False	NA	-6	True	AATAAA	-28	NA	101714676	101668349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
Isoform_165133_8	chr7	-	2124	8	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	128.061050491792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCTTTTTTTTTTTGC	NA	False	NA	-1	True	AATAAA	-33	NA	101714349	101668344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101684513_101684669_101688756_101688899_101691833_101691872_101714272
Isoform_165135_13	chr7	-	6681	33	FSM	ENSMUSG00000063550.9	ENSMUST00000210682.2	6694	33	10	3	10	-3	multi-exon	FALSE	canonical	3	19	junction_23	43.7886324967736	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGTGGTATTGACTT	9980	False	NA	-9	True	AATAAA	-17	NA	101859373	101768607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_165136_8	chr7	-	6644	33	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-33	-2	combination_of_known_junctions	TRUE	canonical	3	26	junction_32	42.9167867615634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTGGTATTGACTTT	9946	False	NA	-8	True	AATAAA	-18	NA	101859107	101768606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
Isoform_165137_58	chr7	-	6609	33	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	39.344581504319	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTGGTATTGACTTT	10002	False	NA	-8	True	AATAAA	-18	NA	101859351	101768606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_165141_28	chr7	-	4087	23	FSM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	-31	-4	-1	4	multi-exon	FALSE	canonical	3	19	junction_13	31.0306766371922	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	9995	False	NA	-1	True	AATAAA	-19	NA	101859358	101783405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_165143_7	chr7	-	4029	23	NIC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	26	junction_22	30.1171610287184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATCTCAGGAAAATCCAT	9979	False	NA	-3	True	AATAAA	-17	NA	101859074	101783407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
Isoform_165145_94	chr7	-	4032	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-6	-278	2	3	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCTCAGGAAAATCCATT	9998	False	NA	-2	True	AATAAA	-18	NA	101859355	101783406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_165146_26	chr7	-	4062	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-36	-278	-2	3	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCTCAGGAAAATCCATT	9968	False	NA	-2	True	AATAAA	-18	NA	101859385	101783406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_165147_8	chr7	-	4669	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-6	-915	2	640	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATCATTACTCATCC	9998	False	NA	-5	True	NA	NA	NA	101859355	101782769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_165148_19	chr7	-	3887	22	NIC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	29.4626093799229	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCTCAGGAAAATCCATT	10002	False	NA	-2	True	AATAAA	-18	NA	101859351	101783406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_165149_3	chr7	-	3356	19	NIC	ENSMUSG00000063550.9	novel	3132	20	NA	NA	-2	363	combination_of_known_splicesites	FALSE	canonical	3	33	junction_8	31.503527139389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGCAAGT	9994	False	NA	NA	False	NA	NA	NA	101859359	101794171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_16515_1629	chr11	-	3014	18	FSM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	23	6	7	-6	multi-exon	FALSE	canonical	3	387	junction_12	55.3609733498447	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6802	False	NA	-7	True	AATAAA	-12	NA	100603268	100595577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
Isoform_165150_17	chr7	-	1251	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	18	0	-17	0	multi-exon	FALSE	canonical	3	11	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCTCCCTATGTG	6378	False	NA	-2	True	AATAAA	-18	NA	101899312	101888329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_101889520_101899251
Isoform_165151_11	chr7	-	2791	9	NNC	ENSMUSG00000030966.14	novel	2793	8	NA	NA	-29	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.53257399408268	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTCTTTCATTCTAC	NA	False	NA	NA	False	AATAAA	-15	NA	102214722	102207128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_102207783_102207812_102208871_102209174_102209276_102209799_102209823_102210994_102211226_102212472_102212569_102212900_102213333_102213478_102213548_102214595
Isoform_165155_16	chr7	-	2383	7	FSM	ENSMUSG00000073968.5	ENSMUST00000082175.7	2388	7	8	-3	8	3	multi-exon	FALSE	canonical	2	5	junction_6	1.21335164821342	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACGAGTCTGCCTGTCA	NA	False	NA	NA	False	ATTAAA	-31	NA	102336526	102326785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_102328045_102328242_102328344_102328880_102328904_102329343_102329605_102330869_102330966_102333254_102333719_102336347
Isoform_165157_6	chr7	-	2524	8	FSM	ENSMUSG00000057143.16	ENSMUST00000130139.3	2484	8	-75	35	-51	-35	multi-exon	FALSE	canonical	0	0	junction_3	1.9059520091609	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	AAGAAA	-41	NA	104002620	103989117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_103990581_103990825_103990853_103991084_103991183_103992262_103992286_103994105_103994337_103995855_103995952_103997134_103997611_104002510
Isoform_165158_4	chr7	-	1887	2	FSM	ENSMUSG00000062369.3	ENSMUST00000076501.2	1407	2	-79	-401	20	346	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTCGTCTTCCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	104491790	104489117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_104490898_104491683
Isoform_165160_8	chr7	-	3436	12	NIC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	119.553784708041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049220	105027816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105028337_105030286_105030450_105030582_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_165161_65	chr7	-	3535	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_12	109.915118765952	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049209	105027816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_165162_29	chr7	-	3565	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_12	109.915118765952	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049239	105027816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_165164_192	chr7	-	3448	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	-4	-1	2	0	multi-exon	FALSE	canonical	3	83	junction_4	97.8877751760945	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049213	105027816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_165165_56	chr7	-	3471	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	-27	-1	3	0	multi-exon	FALSE	canonical	3	83	junction_4	97.8877751760945	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049236	105027816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_165167_11	chr7	-	3757	11	NIC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	83	junction_4	99.153466908626	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049208	105027818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105049090
Isoform_165168_8	chr7	-	3562	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	-41	0	-19	0	multi-exon	FALSE	canonical	3	82	junction_12	109.388038905337	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049280	105027818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_165169_65	chr7	-	3496	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	26	-1	2	0	multi-exon	FALSE	canonical	3	82	junction_12	109.388038905337	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049213	105027817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_165171_40	chr7	-	3431	12	FSM	ENSMUSG00000044465.20	ENSMUST00000179474.9	10853	12	21	7401	-1	0	multi-exon	FALSE	canonical	3	88	junction_4	97.1164419950871	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049240	105027818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_165172_196	chr7	-	3398	12	FSM	ENSMUSG00000044465.20	ENSMUST00000179474.9	10853	12	56	7399	4	0	multi-exon	TRUE	canonical	3	88	junction_4	97.1164419950871	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049205	105027816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_165177_24	chr7	-	2855	12	FSM	ENSMUSG00000044465.20	ENSMUST00000118726.8	2855	12	1	-1	1	0	multi-exon	FALSE	canonical	3	18	junction_3	116.98315199737	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049214	105027816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_165178_14	chr7	-	2924	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	122.831184965382	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049236	105027818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_165179_25	chr7	-	2819	12	NIC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	116.391402937184	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049220	105027816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_165181_4	chr7	-	1090	2	FSM	ENSMUSG00000037060.4	ENSMUST00000047040.4	1662	2	49	523	49	-523	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAGACTCAATGAGAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	105131458	105129812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105130427_105130982
Isoform_165183_8	chr7	-	2759	15	NIC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	53.8097555831502	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230445	105207690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105224636_105224752_105230341
Isoform_165185_434	chr7	-	2633	14	FSM	ENSMUSG00000037032.17	ENSMUST00000189378.7	2878	14	264	-19	-35	0	multi-exon	FALSE	canonical	3	117	junction_6	14.1718113410527	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230434	105207690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
Isoform_165187_14	chr7	-	3033	13	NIC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	-32	0	intron_retention	FALSE	canonical	3	128	junction_3	10.9417650414466	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230431	105207690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
Isoform_165189_77	chr7	-	2856	12	FSM	ENSMUSG00000036989.17	ENSMUST00000106789.8	2841	12	-20	5	3	-3	multi-exon	FALSE	canonical	3	39	junction_9	7.22140985754018	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTTTTGCTAGGTTCT	NA	False	NA	-5	True	AATAAA	-12	NA	105282764	105259859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
Isoform_165190_22	chr7	-	2852	12	FSM	ENSMUSG00000036989.17	ENSMUST00000057525.14	3016	12	-16	180	-5	0	multi-exon	FALSE	canonical	3	8	junction_11	13.9497326613206	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282783	105259856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282609
Isoform_165192_7	chr7	-	2873	12	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	16.03560088889	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282783	105259856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268594_105268822_105274612_105274779_105282583
Isoform_165193_4	chr7	-	2793	12	NIC	ENSMUSG00000036989.17	novel	3016	12	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	19.4834110408092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTTGCTAGGTTCTTG	NA	False	NA	-3	True	AATAAA	-14	NA	105282730	105259857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268594_105268822_105274612_105274779_105282609
Isoform_165194_6	chr7	-	2902	12	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	14.9848408248288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTTTTGCTAGGTTCT	NA	False	NA	-5	True	AATAAA	-12	NA	105282792	105259859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268436_105268589_105268822_105274612_105274779_105282583
Isoform_165195_12	chr7	-	4015	11	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	39	junction_8	7.22841614740048	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282783	105259856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105260418_105260535_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
Isoform_165196_7	chr7	-	4004	11	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_8	16.4632925018053	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTTTTGCTAGGTTCT	NA	False	NA	-5	True	AATAAA	-12	NA	105282780	105259859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105260418_105260535_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268594_105268822_105274612_105274779_105282583
Isoform_165197_7	chr7	-	1801	9	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	49.1030485306157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289543	105284833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105286933_105287069_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_165199_7	chr7	-	3379	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGTTTTTATTGTAT	NA	False	NA	NA	False	NA	NA	NA	105289565	105283414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_165200_56	chr7	-	1960	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289565	105284833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_165201_27	chr7	-	1987	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	31	-3	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289592	105284833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_165202_9	chr7	-	1731	8	FSM	ENSMUSG00000030881.16	ENSMUST00000084782.10	2254	8	15	508	-1	-3	multi-exon	FALSE	canonical	1	5	junction_7	43.718953999101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289543	105284833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288633_105289451
Isoform_165203_30	chr7	-	3213	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	58	4	-7	0	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTTTTTATTGTATT	NA	False	NA	NA	False	NA	NA	NA	105289565	105283413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_165204_186	chr7	-	1793	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	58	1424	-7	-3	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289565	105284833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_165205_60	chr7	-	1823	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	28	1424	28	-3	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289595	105284833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_165207_16	chr7	-	2210	7	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	112	junction_2	9.86013297183269	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289565	105284833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_165208_8	chr7	-	2262	7	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	6	-3	intron_retention	FALSE	canonical	3	112	junction_2	9.86013297183269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289617	105284833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_165209_5	chr7	-	3615	7	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-1	3	intron_retention	FALSE	canonical	3	112	junction_2	9.86013297183269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGTATTGTACCTA	NA	False	NA	NA	False	NA	NA	NA	105289543	105283406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_16521_459	chr11	-	3019	18	FSM	ENSMUSG00000020918.15	ENSMUST00000103118.4	3046	18	21	6	5	-6	multi-exon	FALSE	canonical	3	120	junction_10	104.829867108865	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6800	False	NA	-7	True	AATAAA	-12	NA	100603270	100595577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
Isoform_165213_378	chr7	-	2272	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	304	477	-104	197	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCGTTGATCTCACT	9883	False	NA	-10	True	AATAAA	-14	NA	105385684	105381413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
Isoform_165221_10	chr7	-	1687	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	272	1094	-136	182	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGTGTTTATTGTGA	9851	False	NA	NA	False	NA	NA	NA	105385716	105382030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
Isoform_165229_965	chr7	-	758	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	22	3501	3	2	multi-exon	FALSE	canonical	3	1140	junction_4	81.1861287413065	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGATCCCTCCCATGT	6461	False	NA	-28	True	AATAAA	-17	NA	105393546	105392100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
Isoform_165230_44	chr7	-	4224	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	56	1	37	-1	multi-exon	FALSE	canonical	3	1140	junction_4	81.1861287413065	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATCCCCTAAGGACA	6495	False	NA	-13	True	AATAAA	-19	NA	105393512	105388600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
Isoform_165243_118	chr7	-	3520	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	30	8	-7	-8	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTCTGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	105401412	105394025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
Isoform_165244_343	chr7	-	2427	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	18	1113	0	-5	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGCTTGAGTGATTT	NA	False	NA	-1	True	AATAAA	-25	NA	105401424	105395130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
Isoform_165248_18	chr7	-	2286	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	89.1434909764649	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401424	105395131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105401188_105401261_105401377
Isoform_165254_9	chr7	-	2421	11	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	32	junction_9	92.6736208421792	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401412	105395131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105399538_105401188_105401261_105401377
Isoform_165258_300	chr7	-	809	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	16	6475	16	-1	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATTGACTTTCTTGTCC	NA	False	NA	-29	True	GATAAA	-19	NA	105460290	105458887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_165259_956	chr7	-	718	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	107	6475	4	-1	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATTGACTTTCTTGTCC	NA	False	NA	-29	True	GATAAA	-19	NA	105460199	105458887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_16526_24	chr11	-	3117	17	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	387	junction_11	56.9428167111533	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATTGTTTTTTGGGG	6790	False	NA	-3	True	AATAAA	-16	NA	100603280	100595573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
Isoform_165260_352	chr7	-	831	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	94	6375	-6	76	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGGTCTAGTTTTGCTT	NA	False	NA	-5	True	AGTAAA	-21	NA	105460212	105458787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_165261_133	chr7	-	1094	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	94	6112	-6	339	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGCTCAGTTTGCTT	NA	False	NA	-2	True	NA	NA	NA	105460212	105458524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_165262_20	chr7	-	862	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	-39	6477	-39	-3	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATATTGACTTTCTTGT	NA	False	NA	-31	True	GATAAA	-17	NA	105460345	105458889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_165263_82	chr7	-	882	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	41	6377	-30	74	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGGTCTAGTTTTGC	NA	False	NA	-7	True	AGTAAA	-19	NA	105460265	105458789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_165264_46	chr7	-	1140	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	48	6112	-23	339	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGCTCAGTTTGCTT	NA	False	NA	-2	True	NA	NA	NA	105460258	105458524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_165272_11	chr7	-	1305	10	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	9.77651506998175	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357205	107349171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
Isoform_165273_12	chr7	-	2083	9	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	-9	1	intron_retention	FALSE	canonical	3	29	junction_7	8.01171017948103	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACAATGTGTGGATATG	NA	False	NA	-4	True	AATAAA	-20	NA	107357212	107349170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
Isoform_165274_7	chr7	-	2115	9	NNC	ENSMUSG00000048065.9	novel	2772	9	NA	NA	0	6	intron_retention	FALSE	canonical	3	29	junction_7	8.01171017948103	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGTGGATATGTAGAA	NA	False	NA	1	True	AATAAA	-25	NA	107357239	107349165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
Isoform_165275_4	chr7	-	5272	6	FSM	ENSMUSG00000048330.15	ENSMUST00000120876.2	1633	6	-3	-3636	-3	0	multi-exon	FALSE	canonical	3	26	junction_2	14.7837748900611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATTCAAAAAGTCACTT	NA	False	NA	NA	False	AATAAA	-30	NA	108682532	108633518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_108638091_108647157_108647301_108653571_108653666_108655950_108656024_108656989_108657217_108682369
Isoform_165276_10	chr7	-	4063	6	FSM	ENSMUSG00000048330.15	ENSMUST00000120876.2	1633	6	8	-2438	-3	-1198	multi-exon	FALSE	canonical	3	26	junction_2	14.7837748900611	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTCTACACAATTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	108682521	108634716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_108638091_108647157_108647301_108653571_108653666_108655950_108656024_108656989_108657217_108682369
Isoform_165277_28	chr7	-	4078	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	17	1186	-3	-1186	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGAGGATTTTTTCTTA	NA	False	NA	NA	False	AATAAA	-26	NA	108682521	108634704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
Isoform_165278_3	chr7	-	5316	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	8	-43	-1	43	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCTAAAACTCCAGATAA	NA	False	NA	NA	False	AATAAA	-18	NA	108682530	108633475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
Isoform_165280_3	chr7	-	4169	6	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-3	-1184	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	23.6845941489399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGGATTTTTTCTTAAA	NA	False	NA	NA	False	AATAAA	-28	NA	108682521	108634702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656113_108656989_108657217_108682369
Isoform_165282_14	chr7	-	1890	5	FSM	ENSMUSG00000048330.15	ENSMUST00000133876.2	3258	5	-3	1371	-3	-1371	multi-exon	FALSE	canonical	3	56	junction_3	4.55521678957215	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAATATAATTGCATC	NA	False	NA	NA	False	ATTAAA	-15	NA	108682521	108645959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
Isoform_165283_75	chr7	-	960	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	58	-106	58	3	multi-exon	FALSE	canonical	3	61	junction_1	6.37704215656966	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGCATTGTTCACAT	NA	False	NA	-1	True	ATTAAA	-21	NA	108774356	108737775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
Isoform_165285_21	chr7	-	2177	13	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51252	8	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	19.7188573029304	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCACGTGTCCTTGTGA	NA	False	NA	-6	True	AATAAA	-34	NA	108986772	108878421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108939575_108939687_108940495_108940847_108986659
Isoform_165286_14	chr7	-	1745	11	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51226	12	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_10	9.45568612000208	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTGTCCTTGTGATTCT	NA	False	NA	-2	True	AATAAA	-38	NA	108986798	108878417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
Isoform_165287_3	chr7	-	1382	8	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51244	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.7444267794815	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCACGTGTCCTTGTGAT	NA	False	NA	-5	True	AATAAA	-35	NA	108986780	108878420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108935247_108935353_108986659
Isoform_165301_111	chr7	-	4416	20	FSM	ENSMUSG00000031024.14	ENSMUST00000077909.9	4612	20	196	0	-4	0	multi-exon	TRUE	canonical	3	89	junction_19	35.017605386157	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109215764	109123126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109215504
Isoform_165306_118	chr7	-	4295	21	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_20	42.4156810625504	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302793	109123126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
Isoform_165307_36	chr7	-	4323	21	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_20	42.4156810625504	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302821	109123126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
Isoform_165308_11	chr7	-	4476	22	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_20	63.433754971949	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302809	109123126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109286448_109286614_109302744
Isoform_165310_24	chr7	-	3046	20	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	59.0346628070525	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302795	109123126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109169213_109169319_109216264_109216355_109302744
Isoform_165312_104	chr7	-	1684	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	18	1	-15	-1	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGTTTCTGTTCTCCA	NA	False	NA	1	True	AATAAA	-18	NA	109351468	109335041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
Isoform_165314_4	chr7	-	970	5	NIC	ENSMUSG00000031021.14	novel	1703	5	NA	NA	16	-735	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	49.8315913853852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAAGCCCCGTGCCTGG	NA	False	NA	NA	False	AATAAA	-21	NA	109351470	109335777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349332_109351277
Isoform_165315_19	chr7	-	3911	7	FSM	ENSMUSG00000034825.15	ENSMUST00000033331.7	3910	7	1	-2	1	2	multi-exon	FALSE	canonical	2	8	junction_6	3.54338193757822	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGTCTGAGTCTCTG	NA	False	NA	-3	True	AATAAA	-17	NA	109380751	109357263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109360397_109360853_109360949_109361027_109361081_109362690_109362831_109364672_109364756_109365679_109365842_109380506
Isoform_165317_3	chr7	-	3951	8	FSM	ENSMUSG00000034825.15	ENSMUST00000041460.13	3927	8	-26	2	-26	2	multi-exon	FALSE	canonical	1	2	junction_7	5.70356136505061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGTCTGAGTCTCTG	NA	False	NA	-3	True	AATAAA	-17	NA	109381258	109357263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109360397_109360853_109360949_109361027_109361081_109362690_109362831_109364672_109364756_109365679_109365842_109380506_109380668_109381134
Isoform_165318_3	chr7	-	3089	22	FSM	ENSMUSG00000007279.15	ENSMUST00000106729.8	3563	22	69	405	-24	-1	multi-exon	FALSE	canonical	1	3	junction_18	1.71560795568113	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGGTTTTCTTTCCC	NA	False	NA	NA	False	GATAAA	-3	NA	109464817	109398301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
Isoform_16532_204	chr11	-	1621	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	37	257	-2	-255	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTTCCTCGTCCTT	NA	False	NA	-1	True	AATATA	-23	NA	100629004	100606091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_165333_151	chr7	-	4987	23	FSM	ENSMUSG00000035901.15	ENSMUST00000080437.13	5004	23	11	6	11	-6	multi-exon	FALSE	canonical	3	123	junction_12	18.0282148014056	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATCTCACTGGTCACT	NA	False	NA	NA	False	AATAAA	-9	NA	109559666	109492992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
Isoform_165336_85	chr7	-	2387	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	152	1301	-12	-3	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTGTATCTGTCTTCT	NA	False	NA	-8	True	AATACA	-18	NA	109585506	109572694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
Isoform_165339_19	chr7	-	3348	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	221	271	19	-271	multi-exon	TRUE	canonical	3	346	junction_6	24.644133852366	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACCATTTTTTATGAAG	NA	False	NA	NA	False	AATAAA	-30	NA	109585437	109571664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
Isoform_16534_56	chr11	-	1878	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	37	0	-2	0	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGATTGTTGGTGTCT	NA	False	NA	-10	True	ATTAAA	-17	NA	100629004	100605834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_165341_175	chr7	-	2320	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	221	1299	19	-1	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTATCTGTCTTCTGT	NA	False	NA	-6	True	AATACA	-20	NA	109585437	109572692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
Isoform_165360_6	chr7	-	7148	41	FSM	ENSMUSG00000038371.16	ENSMUST00000033058.14	7154	41	10	-4	4	4	multi-exon	TRUE	canonical	3	12	junction_13	24.8098266821838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACCTCTGAGTGCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	110214117	109907224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
Isoform_165363_6	chr7	-	7170	41	NIC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	25.4321523863003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACCTCTGAGTGCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	110214118	109907224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109947093_109947190_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
Isoform_165364_10	chr7	-	7066	40	NIC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_39	19.8558248483317	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAACCTCTGAGT	NA	False	NA	NA	False	ATTAAA	-11	NA	110214117	109907228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159551_110213913
Isoform_165365_81	chr7	-	7073	40	FSM	ENSMUSG00000038371.16	ENSMUST00000164759.8	7090	40	12	5	4	4	multi-exon	FALSE	canonical	3	82	junction_32	14.3447273642903	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACCTCTGAGTGCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	110214117	109907224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
Isoform_165370_5	chr7	-	3115	6	NIC	ENSMUSG00000030788.17	novel	859	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	1	junction_1	44.445922197655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTAGGTGTTGGGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	110443614	110412738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_110415192_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
Isoform_165373_147	chr7	-	3988	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	43	1	-12	-1	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTAGGTGTTGGGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	110443621	110412738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
Isoform_165376_3	chr7	-	3788	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	11	233	-2	-233	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGTTTGCTTATGTAA	NA	False	NA	NA	False	AGTAAA	-26	NA	110443653	110412970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
Isoform_165379_9	chr7	-	3823	5	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	2	0	intron_retention	FALSE	canonical	2	4	junction_4	48.6640267548833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	110443649	110412737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110443545
Isoform_16539_5	chr11	-	1772	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	-20	163	-20	-161	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAATGGCTCTACTCCCT	NA	False	NA	-32	True	AATGAA	-13	NA	100629061	100605997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_1654_14	chr10	-	2845	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	14	-7	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCTTCATTATCTCCA	NA	False	NA	-13	True	AATAAA	-14	NA	13350142	13089145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
Isoform_16542_12	chr11	-	2625	5	NIC	ENSMUSG00000019173.12	novel	1967	6	NA	NA	-16	-255	intron_retention	FALSE	canonical	3	135	junction_4	8.66025403784439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTTCCTCGTCCTT	NA	False	NA	-1	True	AATATA	-23	NA	100629018	100606091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100606989_100607583_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_16543_5	chr11	-	2847	5	NIC	ENSMUSG00000019173.12	novel	1915	6	NA	NA	19	0	intron_retention	FALSE	canonical	3	135	junction_4	8.66025403784439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGATTGTTGGTGTCT	NA	False	NA	-10	True	ATTAAA	-17	NA	100628983	100605834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100606989_100607583_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_165446_12523	chr7	-	3788	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	25	4182	12	0	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	12523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
Isoform_165448_1242	chr7	-	4990	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	25	2980	12	1202	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682212	110669936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
Isoform_16548_45	chr11	-	2455	9	FSM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	11	-4	-4	4	multi-exon	FALSE	canonical	3	37	junction_7	5.82961190818051	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATGTATTTTATGTTA	NA	False	NA	NA	False	NA	NA	NA	100661772	100656853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100661704
Isoform_16549_3	chr11	-	2487	9	NNC	ENSMUSG00000017747.14	novel	2462	9	NA	NA	-3456	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	14.9582753016516	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAATGTATGTATTTT	NA	False	NA	NA	False	NA	NA	NA	100665239	100656859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100665133
Isoform_1655_6	chr10	-	2979	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-114	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATTATCTCCAAAGTCA	NA	False	NA	-7	True	AATAAA	-20	NA	13350270	13089139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
Isoform_165501_2644	chr7	-	3674	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	12	0	12	0	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	2644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
Isoform_165502_300	chr7	-	4877	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	12	-1203	12	1203	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682212	110669935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
Isoform_16551_95	chr11	-	4888	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	172	2	-14	-2	multi-exon	FALSE	canonical	3	41	junction_6	7.16386680880661	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGAGTCCTGTTTCCT	NA	False	NA	-2	True	AATAAA	-19	NA	100741378	100671558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
Isoform_16552_6	chr11	-	5012	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	49	1	49	-1	multi-exon	TRUE	canonical	3	41	junction_6	7.16386680880661	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGAGTCCTGTTTCCTT	NA	False	NA	-1	True	AATAAA	-20	NA	100741501	100671557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
Isoform_165536_93	chr7	-	3270	7	ISM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	631	5	631	-5	3prime_fragment	FALSE	canonical	3	37	junction_5	9.03234926989282	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCATGGTATGGGT	NA	False	NA	-6	True	AATAAA	-18	NA	111757633	111715228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389
Isoform_165539_3	chr7	-	3399	8	FSM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	-53	13	-53	-13	multi-exon	FALSE	canonical	0	0	junction_7	18.9198092927352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCACCTGTGTCCATG	NA	False	NA	-14	True	AATAAA	-10	NA	111758317	111715236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389_111757626_111758172
Isoform_165540_11	chr7	-	3184	6	NIC	ENSMUSG00000030772.7	novel	3359	8	NA	NA	633	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	21.3971960779912	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCATGGTATGGGT	NA	False	NA	-6	True	AATAAA	-18	NA	111757631	111715228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111749817_111749956_111757389
Isoform_165544_110	chr7	-	2582	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	-21	20	-21	0	multi-exon	FALSE	canonical	3	112	junction_8	39.4138300600183	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	112968567	112914852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
Isoform_165546_20	chr7	-	2518	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-21	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	62.9638344166272	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCTGACCAACTTTAT	NA	False	NA	-18	True	AATAAA	-15	NA	112968567	112914851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112968078_112968166_112968405
Isoform_165547_111	chr7	-	2425	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-21	1	combination_of_known_splicesites	FALSE	canonical	3	63	junction_7	47.410734836931	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCTGACCAACTTTAT	NA	False	NA	-18	True	AATAAA	-15	NA	112968567	112914851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112964111_112964177_112968078_112968166_112968405
Isoform_165549_92	chr7	-	2359	9	FSM	ENSMUSG00000038187.15	ENSMUST00000119278.8	2394	9	32	3	-21	0	multi-exon	FALSE	canonical	3	59	junction_7	50.6814500088543	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	112968567	112914852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968166_112968405
Isoform_16555_8	chr11	-	2680	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	132	2250	-54	-2250	multi-exon	FALSE	canonical	3	41	junction_6	7.16386680880661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTGACTTTAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	100741418	100673806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
Isoform_165552_328	chr7	-	2270	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	2	3	2	0	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGACGCTTGACGGCTCC	NA	False	NA	-4	True	ATTAAA	-18	NA	113717014	113646019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
Isoform_16556_5	chr11	-	5065	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	-5	2	-5	-2	multi-exon	FALSE	canonical	3	41	junction_6	7.16386680880661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGAGTCCTGTTTCCT	NA	False	NA	-2	True	AATAAA	-19	NA	100741555	100671558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
Isoform_165570_1254	chr7	-	3330	22	FSM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	12	4	-8	-4	multi-exon	FALSE	canonical	3	435	junction_12	34.3731688854697	1254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTGTATCTGTGGGAT	NA	False	NA	-11	True	AATAAA	-12	NA	113853934	113814797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
Isoform_16558_131	chr11	-	4376	24	FSM	ENSMUSG00000004040.17	ENSMUST00000103114.8	6042	24	-46	1712	29	0	multi-exon	FALSE	canonical	3	67	junction_2	102.13864331127	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830276	100777635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100779587_100780303_100780367_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_165589_1541	chr7	-	1134	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	65	2	1	-2	multi-exon	FALSE	canonical	3	2548	junction_6	196.061655709387	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875288	113863842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
Isoform_165590_717	chr7	-	1160	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	39	2	-12	-2	multi-exon	FALSE	canonical	3	2548	junction_6	196.061655709387	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875314	113863842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
Isoform_165593_32	chr7	-	1295	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	57	-151	6	151	multi-exon	TRUE	canonical	3	2548	junction_6	196.061655709387	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTTATGTAGACTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	113875296	113863689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
Isoform_165596_28	chr7	-	2610	9	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	2548	junction_5	193.487685331651	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875287	113863842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
Isoform_165599_5	chr7	-	961	5	NIC	ENSMUSG00000030669.14	novel	994	5	NA	NA	-2	-9	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	37.532485928859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTCAAGTGGAGTCTTT	2082	False	NA	-9	True	ATTAAA	-18	NA	114235544	114230721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235422
Isoform_165600_56	chr7	-	942	5	FSM	ENSMUSG00000030669.14	ENSMUST00000032906.11	994	5	48	4	-2	-4	multi-exon	FALSE	canonical	3	77	junction_2	7.39932429347437	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGGAGTCTTTGCTGT	2082	False	NA	-4	True	ATTAAA	-23	NA	114235544	114230716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235446
Isoform_165602_22	chr7	-	2811	4	NIC	ENSMUSG00000030669.14	novel	994	5	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	87	junction_3	3.77123616632825	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGGAGTCTTTGCTGTT	2082	False	NA	-3	True	ATTAAA	-24	NA	114235544	114230715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_114231141_114231650_114233844_114234361_114234457_114235446
Isoform_165603_8	chr7	-	820	4	FSM	ENSMUSG00000030669.14	ENSMUST00000032907.9	830	4	3	7	-2	-7	multi-exon	FALSE	canonical	3	6	junction_1	40.2022663816634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATTTGAACCATG	2082	False	NA	NA	False	AATAAA	-9	NA	114235544	114232534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_114233021_114233702_114233844_114234361_114234457_114235446
Isoform_165604_5	chr7	-	3303	4	NNC	ENSMUSG00000030669.14	novel	830	4	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	43.0219582177391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGAGTCTTTGCTGTTA	2080	False	NA	-2	True	ATTAAA	-25	NA	114235546	114230714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_114231915_114231935_114233844_114234361_114234457_114235446
Isoform_165620_7	chr7	-	5006	25	ISM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	305	29	-21	-29	3prime_fragment	FALSE	canonical	3	186	junction_4	27.274803950818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115907306	115722756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159
Isoform_165621_10	chr7	-	5083	26	ISM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	173	-5	38	-3	3prime_fragment	FALSE	canonical	3	186	junction_4	27.1764604023408	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGCTCTTGCTGGCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	115907438	115722722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306
Isoform_165622_392	chr7	-	5119	27	FSM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	30	0	9	0	multi-exon	FALSE	canonical	3	186	junction_4	26.6807778245958	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTCCTGGCTCTTGCT	NA	False	NA	-6	True	ATTAAA	-13	NA	115907581	115722727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
Isoform_16563_27	chr11	-	4375	24	NIC	ENSMUSG00000004040.17	novel	6042	24	NA	NA	32	5	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	132.710523982853	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGCTGGCTGGCTGGC	NA	False	NA	1	True	AATAAA	-24	NA	100830273	100777630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100779587_100780303_100780367_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_165630_79	chr7	-	4609	23	FSM	ENSMUSG00000045659.19	ENSMUST00000182487.8	3476	23	9	-1142	9	0	multi-exon	FALSE	canonical	3	231	junction_11	21.5147460482494	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGATTGGCGTGGTTCTTCC	NA	False	NA	0	True	AATAAA	-18	NA	115907581	115733025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
Isoform_165635_1023	chr7	-	567	6	FSM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	16	6	-13	0	multi-exon	FALSE	canonical	3	42	junction_1	4075.24362952695	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTGTTTTGTGGTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	115933414	115930745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
Isoform_165640_19	chr7	-	7987	34	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.883512472819	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGAACTTGGCTGT	NA	False	NA	NA	False	ATTAAA	-39	NA	116042661	115936510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_115938224_115938246_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
Isoform_165651_2710	chr7	-	459	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	28	4692	28	0	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	2710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715383	117708286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
Isoform_165652_1295	chr7	-	490	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	-3	4692	-3	0	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715414	117708286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
Isoform_165666_2984	chr7	-	2074	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	87	10	-1	-10	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	2984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTCACTTTCTTTG	NA	False	NA	-21	True	ATTAAA	-15	NA	117728798	117718123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
Isoform_165672_68	chr7	-	2379	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	87	-295	-1	295	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCCTATGGCTTTGAA	NA	False	NA	-18	True	AGTAAA	-4	NA	117728798	117717818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
Isoform_165686_9	chr7	-	15592	63	FSM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	-38	3	-5	-3	multi-exon	TRUE	canonical	3	32	junction_39	26.3486045060696	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTATCTAAGCTCTGA	NA	False	NA	-7	True	AATAAA	-26	NA	117842898	117730533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
Isoform_165687_4	chr7	-	15488	63	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_53	27.4460401454748	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTATCTAAGCTCTG	NA	False	NA	-8	True	AATAAA	-25	NA	117842899	117730534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795155_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
Isoform_165690_11	chr7	-	1994	12	ISM	ENSMUSG00000030655.16	ENSMUST00000208209.2	2287	13	-58	1667	-11	1148	5prime_fragment	FALSE	canonical	3	33	junction_4	6.09023062707063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAGGTAAGTAAC	NA	False	NA	NA	False	NA	NA	NA	117842904	117794269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
Isoform_165691_8	chr7	-	2943	8	NIC	ENSMUSG00000058420.9	novel	2957	8	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	2.16653584115759	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCATTGGAGTTATCTAT	NA	False	NA	-6	True	AATAAA	-18	NA	118047432	117979941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_117981276_118007247_118007404_118009146_118009268_118033055_118033676_118036045_118036195_118041570_118041720_118042341_118042360_118047036
Isoform_165692_498	chr7	-	861	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	51	2	-4	-2	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCTTGGTTTTCTTGTG	6676	False	NA	-4	True	AATAAA	-14	NA	118132528	118124286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
Isoform_165694_6	chr7	-	2003	5	NIC	ENSMUSG00000030652.12	novel	914	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	921	junction_3	45.3376223461266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6676	False	NA	-2	True	AATAAA	-16	NA	118132528	118124284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118128961_118132401
Isoform_1657_4	chr10	-	3422	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-92	464	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTCTTCTCTGCAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	13350248	13088674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
Isoform_165700_230	chr7	-	4500	17	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	2	106	junction_9	15.9813123287795	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTGTTGGGTGCGTGT	4167	False	NA	-4	True	AATAAA	-16	NA	118183936	118135065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_118136779_118136799_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
Isoform_165702_3	chr7	-	4408	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36.9862436890018	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGGGTGCGTGTTGTG	4184	False	NA	0	True	AATAAA	-20	NA	118183919	118135061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_118136779_118136799_118137441_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
Isoform_165703_3	chr7	-	3520	12	ISM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	40	8004	-10	2740	5prime_fragment	FALSE	canonical	3	106	junction_4	13.6169558860747	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGGATCTTGAAATTTAA	4184	False	NA	NA	False	AATAAA	-30	NA	118183919	118143067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
Isoform_165707_31	chr7	-	1536	6	NIC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	-1	-13	combination_of_known_junctions	FALSE	canonical	3	76	junction_5	166.218410532648	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGGGCAAACTGTGTA	NA	False	NA	-10	True	AATAAA	-15	NA	118304972	118287780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297950_118304612
Isoform_165708_615	chr7	-	1507	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	62	13	32	-13	multi-exon	TRUE	canonical	3	428	junction_5	40.804901666344	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGGGCAAACTGTGTA	NA	False	NA	-10	True	AATAAA	-15	NA	118304939	118287780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
Isoform_165723_428	chr7	-	5070	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	315	-3	1	3	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTCTTTTGAATGTG	NA	False	NA	-14	True	AATAAA	-19	NA	118454906	118441441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
Isoform_165740_137	chr7	-	2861	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	54	1603	54	-641	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTCTCTGCTGTGTCC	NA	False	NA	-4	True	AATAAA	-18	NA	118594380	118572872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
Isoform_165741_78	chr7	-	4494	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	28	-4	28	4	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCGTGGTAGCTTGTCA	NA	False	NA	1	True	AATAAA	-19	NA	118594406	118571265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
Isoform_165742_4	chr7	-	2805	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	-4	1717	-4	693	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAATGCAAATTTTTAA	NA	False	NA	NA	False	TATAAA	-21	NA	118594438	118572986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
Isoform_165743_11	chr7	-	2648	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	5	1865	5	545	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTTTGGCCAGCATAA	NA	False	NA	NA	False	ATTAAA	-16	NA	118594429	118573134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
Isoform_165750_1753	chr7	-	2666	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	20	3	-14	-3	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGCATTCTTTTTT	NA	False	NA	-4	True	AATAAA	-17	NA	119320001	119314318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
Isoform_165759_30	chr7	-	3522	3	NIC	ENSMUSG00000030942.9	novel	2689	4	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	902	junction_1	12.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGCATTCTTTTTT	NA	False	NA	-4	True	AATAAA	-17	NA	119320001	119314318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_119316293_119317244_119318525_119319733
Isoform_165766_19	chr7	-	3466	9	FSM	ENSMUSG00000030929.18	ENSMUST00000033224.14	3487	9	1	20	1	-3	multi-exon	FALSE	canonical	3	9	junction_7	22.8965062837106	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGACATGTAGAACATC	NA	False	NA	-20	True	AATAAA	-16	NA	119393204	119383069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391567_119391653_119391722_119393140
Isoform_165768_117	chr7	-	3472	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	78	14	2	-1	multi-exon	FALSE	canonical	3	53	junction_1	8.7571399440685	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACATGTAGAACATCAG	NA	False	NA	-18	True	AATAAA	-18	NA	119393203	119383067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
Isoform_165772_5	chr7	-	735	3	NIC	ENSMUSG00000030929.18	novel	973	9	NA	NA	0	-4284	intron_retention	FALSE	canonical	3	81	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAATATAAA	NA	False	NA	NA	False	NA	NA	NA	119393190	119390000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_119390452_119391487_119391722_119393140
Isoform_165775_19	chr7	-	2834	3	FSM	ENSMUSG00000048787.14	ENSMUST00000142120.2	630	3	-5	-2199	-5	12	multi-exon	FALSE	canonical	3	12	junction_2	52.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATACAATGAAAAAGTGTC	NA	False	NA	5	True	AATAAA	-28	NA	119461060	119455016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_119457280_119458602_119459139_119461025
Isoform_165776_5	chr7	-	3105	3	FSM	ENSMUSG00000048787.14	ENSMUST00000098080.9	3072	3	-12	-21	-12	14	multi-exon	FALSE	canonical	3	5	junction_2	56	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAATGAAAAAGTGTCTA	NA	False	NA	7	True	AATAAA	-30	NA	119494778	119455014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_119457280_119458602_119459139_119494474
Isoform_165777_24	chr7	-	2963	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	33	2989	33	21	multi-exon	FALSE	canonical	3	85	junction_2	16	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGTGTCTATTAAATA	NA	False	NA	14	True	AATAAA	-37	NA	119494935	119455007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_119457280_119458602_119459139_119494780
Isoform_165789_12	chr7	-	5612	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	4	369	4	-369	multi-exon	FALSE	canonical	3	85	junction_2	16	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGATATTTCTGCAG	NA	False	NA	-10	True	AATAAA	-12	NA	119494964	119452387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_119457280_119458602_119459139_119494780
Isoform_165791_6	chr7	-	5612	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	35	338	35	-338	multi-exon	FALSE	canonical	3	85	junction_2	16	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAATTTATTCTGAGGT	NA	False	NA	21	True	AATAAA	-43	NA	119494933	119452356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_119457280_119458602_119459139_119494780
Isoform_165793_18	chr7	-	2907	3	NNC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	18	23	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	47.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGTCTATTAAATATT	NA	False	NA	16	True	AATAAA	-39	NA	119494950	119455005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_119457280_119458602_119459139_119494853
Isoform_165794_7	chr7	-	5543	3	NNC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	-1	-370	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	47.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATTGATATTTCTGCA	NA	False	NA	-11	True	AATAAA	-11	NA	119494969	119452388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_119457280_119458602_119459139_119494853
Isoform_165795_4	chr7	-	2978	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	-56	19	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	52.0917993119412	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAAAGTGTCTATTAAA	NA	False	NA	12	True	AATAAA	-35	NA	119494822	119455009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_119457280_119458602_119459139_119469637_119469768_119494780
Isoform_165796_13	chr7	-	1282	8	FSM	ENSMUSG00000030905.6	ENSMUST00000033198.6	1383	8	94	7	94	-7	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGTCCTTTGACAA	NA	False	NA	-6	True	AATAAA	-14	NA	119801240	119785609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_119785922_119788948_119789034_119789674_119789797_119794547_119794732_119796872_119796975_119798470_119798534_119800299_119800451_119800977
Isoform_165797_91	chr7	-	2495	5	FSM	ENSMUSG00000030878.12	ENSMUST00000033169.9	2525	5	25	5	-2	-5	multi-exon	FALSE	canonical	3	32	junction_2	6.89202437604511	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGGTCTACGTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	120581510	120556263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_120558021_120559314_120559480_120559732_120559882_120569548_120569662_120581199
Isoform_165798_75	chr7	-	2531	5	FSM	ENSMUSG00000030878.12	ENSMUST00000033169.9	2525	5	-10	4	-10	-4	multi-exon	FALSE	canonical	3	32	junction_2	6.89202437604511	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGGGTCTACGTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	120581545	120556262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_120558021_120559314_120559480_120559732_120559882_120569548_120569662_120581199
Isoform_16580_967	chr11	-	4423	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	93	0	32	0	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830273	100777635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_165800_13	chr7	-	6507	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-189	3880	-189	-3880	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTTTAGTGCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	121306665	121245123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
Isoform_165802_10	chr7	-	10387	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-192	3	-192	-3	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATATTTGTCTTTTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	121306668	121241246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
Isoform_165804_452	chr7	-	2885	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	17	0	0	0	multi-exon	TRUE	canonical	3	174	junction_8	14.1585607937389	452	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGTGTTTCCTTCTTCT	8941	False	NA	0	True	AATAAA	-17	NA	121580917	121522061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
Isoform_165821_2886	chr7	-	2835	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	37	2043	2	0	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	2886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGGTGTTGAGTCCA	NA	False	NA	-5	True	AATAAA	-14	NA	121620408	121587987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
Isoform_165825_77	chr7	-	4877	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	37	1	2	-1	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTAGTGTCACTGTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	121620408	121585945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
Isoform_165835_203	chr7	-	1838	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	208	0	15	0	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGTTTTGCCTCCAT	NA	False	NA	-1	True	TTTAAA	-18	NA	121666278	121638043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_165836_133	chr7	-	2003	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	207	-164	14	164	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGTGCGTCATTACC	NA	False	NA	-2	True	NA	NA	NA	121666279	121637879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_165837_6	chr7	-	3448	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	207	-1609	14	1	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAATCTCTAG	NA	False	NA	NA	False	NA	NA	NA	121666279	121636434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_165840_6	chr7	-	2821	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	208	-983	15	-625	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGAAATCAGGTTTCC	NA	False	NA	NA	False	TATAAA	-14	NA	121666278	121637060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_165843_4	chr7	-	3242	8	FSM	ENSMUSG00000030871.12	ENSMUST00000147397.2	3222	8	-22	2	-22	-2	multi-exon	FALSE	canonical	3	137	junction_2	8.41281820819169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTGTTTTGCCTCC	NA	False	NA	-3	True	TTTAAA	-16	NA	121666315	121638045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_165846_5	chr7	-	2060	9	NIC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	6	164	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	48.4709964824327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGTGCGTCATTACC	NA	False	NA	-2	True	NA	NA	NA	121666287	121637879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_121638382_121638934_121639120_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_165849_65	chr7	-	678	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	45	2756	10	299	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATCGTTTCTGCTGAA	6403	False	NA	NA	False	TTTAAA	-36	NA	121701064	121687381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
Isoform_165859_2056	chr7	-	630	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	5	781	5	-4	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	2056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGTATTTTTCTCAAT	6398	False	NA	-17	True	AATAAA	-10	NA	121701069	121690059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
Isoform_16586_26	chr11	-	4487	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	29	0	29	0	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830337	100777635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_165867_236	chr7	-	3739	13	FSM	ENSMUSG00000044702.14	ENSMUST00000098068.10	3750	13	10	1	10	-1	multi-exon	FALSE	canonical	3	74	junction_9	28.0835806121655	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGCTTGTTCTATTT	NA	False	NA	-1	True	AATAAA	-19	NA	121732159	121706485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_165868_5	chr7	-	3645	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	48.403264694211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732161	121706487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728896_121728957_121731942
Isoform_165869_23	chr7	-	2650	13	FSM	ENSMUSG00000044702.14	ENSMUST00000106469.8	2559	13	-94	3	8	0	multi-exon	FALSE	canonical	3	13	junction_9	41.4242950721219	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732161	121706487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121727360_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_165870_6	chr7	-	3601	13	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	43.6898793264018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTTGGCTTGTTCTA	NA	False	NA	-4	True	AATAAA	-16	NA	121732161	121706488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723616_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_165871_20	chr7	-	1979	12	NIC	ENSMUSG00000044702.14	novel	2559	13	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	40.7258522479556	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGCTTGTTCTATTT	NA	False	NA	-1	True	AATAAA	-19	NA	121732159	121706485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121727360_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_165872_13	chr7	-	1654	11	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_8	41.0980534818865	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTTGGCTTGTTCTA	NA	False	NA	-4	True	AATAAA	-16	NA	121732143	121706488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121728145_121728240_121728896_121728957_121731942
Isoform_165874_9	chr7	-	4851	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	10	0	intron_retention	FALSE	canonical	3	74	junction_8	28.4038176924183	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732159	121706487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_165876_5	chr7	-	4701	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	16	junction_7	45.3928672446918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGCTTGGCTTGTTC	NA	False	NA	-6	True	AATAAA	-14	NA	121732149	121706490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723616_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_165878_16	chr7	-	3298	12	FSM	ENSMUSG00000044702.14	ENSMUST00000106468.7	3304	12	5	1	-3	-1	multi-exon	FALSE	canonical	3	17	junction_1	44.3423943183529	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATTGCTTGTCGAATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	121732135	121710795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121710994_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_165882_205	chr7	-	3399	21	NIC	ENSMUSG00000030766.16	novel	3311	20	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969126	122878496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_165885_24	chr7	-	3439	21	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969163	122878493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_165886_17	chr7	-	3509	21	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-98	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969236	122878496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_165889_14	chr7	-	3344	20	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	48.7393428936662	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969111	122878496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
Isoform_165890_6	chr7	-	3228	18	NNC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-26019	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	50.9133873394869	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122921832	122878496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122921634
Isoform_165891_11	chr7	-	3154	20	FSM	ENSMUSG00000030766.16	ENSMUST00000205262.2	3036	20	-7	-111	-6	1	multi-exon	FALSE	canonical	0	0	junction_19	60.4560690757234	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969115	122878496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_165892_11	chr7	-	3387	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-54	3	-25	1	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969163	122878496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_165893_109	chr7	-	3340	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-7	3	-7	1	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969116	122878496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_165895_8	chr7	-	3501	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-165	0	-136	0	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969274	122878493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_165896_12	chr7	-	3343	19	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	53.6950982888281	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969159	122878496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
Isoform_165899_6	chr7	-	3740	7	FSM	ENSMUSG00000030757.14	ENSMUST00000042470.14	7831	7	-131	4222	-131	536	multi-exon	FALSE	canonical	1	4	junction_1	4.54606056566195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGAGGCTAATGCTATT	NA	False	NA	NA	False	AATAAA	-13	NA	123099803	123078828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_123079996_123084162_123084655_123088801_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
Isoform_165901_4	chr7	-	3707	4	NIC	ENSMUSG00000030757.14	novel	7831	7	NA	NA	-118	5914	intron_retention	FALSE	canonical	3	13	junction_2	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTAAAAGTCACCATAAT	NA	False	NA	NA	False	NA	NA	NA	123099790	123087522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_123089486_123094028_123094587_123097808_123097996_123098791
Isoform_165904_721	chr7	-	961	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	153	6	-44	-6	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGGGCTTGTGTGAGG	NA	False	NA	-17	True	AGTAAA	-27	NA	125090615	125066817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
Isoform_165905_10	chr7	-	1038	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	77	5	77	-5	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGGCTTGTGTGAGGT	NA	False	NA	-16	True	AGTAAA	-28	NA	125090691	125066816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
Isoform_16592_197	chr11	-	4389	24	FSM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	-38	-1424	-14	-2	multi-exon	FALSE	canonical	3	73	junction_3	102.661666503989	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCAGTGGGGGCTGGCT	NA	False	NA	-6	True	AATAAA	-17	NA	100830244	100777637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_165935_212	chr7	-	6903	37	FSM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	57	1	19	-1	multi-exon	FALSE	canonical	3	171	junction_34	23.9112782676933	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGTGTATTGGCCTAAT	NA	False	NA	0	True	ATTAAA	-15	NA	125306895	125240126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
Isoform_165936_13	chr7	-	6970	37	FSM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	-9	0	-9	0	multi-exon	FALSE	canonical	3	171	junction_34	23.9112782676933	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGTATTGGCCTAATG	NA	False	NA	1	True	ATTAAA	-16	NA	125306961	125240125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
Isoform_165952_31	chr7	-	4533	24	FSM	ENSMUSG00000000131.16	ENSMUST00000009344.16	4455	24	-82	4	11	1	multi-exon	FALSE	canonical	3	58	junction_14	102.701045398272	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGTGATGGGGCATC	NA	False	NA	NA	False	AATAAA	-23	NA	125799662	125700891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
Isoform_165953_137	chr7	-	4484	24	FSM	ENSMUSG00000000131.16	ENSMUST00000009344.16	4455	24	-34	5	-20	0	multi-exon	FALSE	canonical	3	58	junction_14	102.701045398272	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799614	125700892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
Isoform_165968_1139	chr7	-	4483	24	FSM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	64	5	-15	1	multi-exon	TRUE	canonical	3	436	junction_21	38.8223134638356	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGTGATGGGGCATC	NA	False	NA	NA	False	AATAAA	-23	NA	125799609	125700891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
Isoform_165969_247	chr7	-	4536	24	FSM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	11	5	11	1	multi-exon	FALSE	canonical	3	436	junction_21	38.8223134638356	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGTGATGGGGCATC	NA	False	NA	NA	False	AATAAA	-23	NA	125799662	125700891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
Isoform_16597_63	chr11	-	3213	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	272	6	-64	-6	multi-exon	FALSE	canonical	2	4	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTTGTGTGAGGTTA	NA	False	NA	-5	True	AATAAA	-13	NA	100861441	100847564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100850152_100860815
Isoform_165978_7	chr7	-	1227	12	NIC	ENSMUSG00000030742.8	novel	1235	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	13.1689592452595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGTCGTTGTCTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	125968742	125963000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967713_125967973_125968009_125968113_125968142_125968319
Isoform_165979_41	chr7	-	1259	12	FSM	ENSMUSG00000030742.8	ENSMUST00000032997.8	1235	12	-26	2	10	-2	multi-exon	FALSE	canonical	3	34	junction_9	5.32264769756525	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGTCGTTGTCTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	125968732	125963000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967755_125967973_125968009_125968113_125968142_125968319
Isoform_165985_1441	chr7	-	2185	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	31	3	2	-3	multi-exon	TRUE	canonical	3	348	junction_9	48.6508899292612	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACTGCTTGTCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	125976591	125969234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
Isoform_165986_142	chr7	-	2212	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	0	7	0	0	multi-exon	FALSE	canonical	3	348	junction_9	48.6508899292612	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976622	125969238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
Isoform_165992_41	chr7	-	2113	13	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	122.006830409886	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008_125976218_125976289
Isoform_165994_25	chr7	-	3178	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	376	junction_6	42.5305772356783	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
Isoform_165995_30	chr7	-	2033	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	13	junction_8	135.864785724631	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125974238_125974376_125975845_125975912_125976008
Isoform_1660_47	chr10	-	2086	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	21	22	2	4	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGCTTTGTTTAGTT	NA	False	NA	NA	False	AATAAA	-12	NA	13428862	13399881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
Isoform_16600_3	chr11	-	2352	2	FSM	ENSMUSG00000004044.10	ENSMUST00000132934.2	658	2	-62	-1632	-62	1632	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGCCTGTTGGGAGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	100861439	100853600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100855329_100860815
Isoform_16601_21	chr11	-	1025	7	FSM	ENSMUSG00000019303.15	ENSMUST00000126386.8	1030	7	-4	9	-4	-9	multi-exon	FALSE	canonical	3	369	junction_2	24.7571538482651	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAACCTCCCAGATAT	NA	False	NA	-5	True	TATAAA	-21	NA	100986230	100982966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983
Isoform_166017_564	chr7	-	3371	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	18	-1	18	1	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995891	125982024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
Isoform_166027_18	chr7	-	3467	7	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	12	1	intron_retention	FALSE	canonical	3	215	junction_6	22.8892259953601	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995897	125982024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989916_125990442_125990567_125995113_125995187_125995527
Isoform_166028_11	chr7	-	3471	7	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	0	intron_retention	FALSE	canonical	3	215	junction_6	20.4260182664714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995892	125982025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_125984312_125986573_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
Isoform_166030_12	chr7	-	3115	6	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	94.5101052798059	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995890	125982024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_125984312_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
Isoform_166034_21	chr7	-	3392	10	FSM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	2	-1	2	-1	multi-exon	FALSE	canonical	3	29	junction_9	100.767548176147	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGGCTGATATTT	8206	False	NA	-2	True	AATAAA	-27	NA	126074273	126066166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
Isoform_166036_157	chr7	-	3025	10	NIC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	75.3988571154828	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8195	False	NA	-3	True	AATAAA	-26	NA	126074284	126066167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
Isoform_166037_9	chr7	-	3044	11	NIC	ENSMUSG00000030733.11	novel	2909	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	107.60525080125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8203	False	NA	-6	True	AATAAA	-23	NA	126074276	126066170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126068659_126068743_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
Isoform_16604_3	chr11	-	2484	7	FSM	ENSMUSG00000019303.15	ENSMUST00000126386.8	1030	7	-3	-1451	-3	1142	multi-exon	FALSE	canonical	3	369	junction_2	24.7571538482651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAACAAACTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	100986229	100981506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983
Isoform_166040_12	chr7	-	4871	9	ISM	ENSMUSG00000030733.11	ENSMUST00000205340.2	3366	10	17	2	-10	0	intron_retention	FALSE	canonical	3	197	junction_2	37.3528362376942	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8194	False	NA	-6	True	AATAAA	-23	NA	126074285	126066170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
Isoform_166044_12	chr7	-	4469	10	ISM	ENSMUSG00000030733.11	ENSMUST00000205440.2	3089	11	-5	5	-5	0	intron_retention	FALSE	canonical	3	19	junction_9	85.0607625955313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8212	False	NA	-6	True	AATAAA	-23	NA	126074267	126066170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650
Isoform_166045_13	chr7	-	3315	11	NNC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	104.43892952343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGCTGTGGCTGATAT	8194	False	NA	-4	True	AATAAA	-25	NA	126074285	126066168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650_126072994_126074167
Isoform_166046_52	chr7	-	3321	10	FSM	ENSMUSG00000030733.11	ENSMUST00000205340.2	3366	10	46	-1	6	0	multi-exon	FALSE	canonical	3	29	junction_9	82.2103595046059	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8223	False	NA	-3	True	AATAAA	-26	NA	126074256	126066167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
Isoform_166049_430	chr7	-	2964	10	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_2	41.0918873973506	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8203	False	NA	-3	True	AATAAA	-26	NA	126074276	126066167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
Isoform_16605_150	chr11	-	933	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	29	329	-7	5	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTCTGGATGATCAAAC	NA	False	NA	-16	True	TATAAA	-10	NA	100986233	100982977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
Isoform_166051_17	chr7	-	3025	10	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	72	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	86.4935593120617	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	7955	False	NA	-1	True	AATAAA	-28	NA	126074524	126066165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074356
Isoform_166053_10	chr7	-	3393	9	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	198	junction_8	37.1247895616931	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8194	False	NA	-6	True	AATAAA	-23	NA	126074285	126066170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126066946_126067121_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
Isoform_166068_58	chr7	-	1803	10	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-1893	-1	combination_of_known_splicesites	FALSE	canonical	3	238	junction_2	314.560402647219	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTATGGGTTTGATT	NA	False	NA	-1	True	NA	NA	NA	126094441	126090880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371
Isoform_166071_39	chr7	-	3499	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	105	-1	combination_of_known_splicesites	FALSE	canonical	3	143	junction_23	266.578786716817	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTATGGGTTTGATT	7347	False	NA	-1	True	NA	NA	NA	126101167	126090880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_166073_41	chr7	-	3571	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	238	junction_2	256.034939723406	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	6930	False	NA	-3	True	NA	NA	NA	126101584	126090882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
Isoform_166075_55	chr7	-	4007	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	3	238	junction_2	247.412454204056	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTATGGGTTTGATT	9401	False	NA	-1	True	NA	NA	NA	126102622	126090880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
Isoform_16608_11	chr11	-	2664	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	33	-1406	-3	1406	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGGAGTGTTGCCTAC	NA	False	NA	NA	False	AAAAAG	-6	NA	100986229	100981242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
Isoform_166087_23	chr7	-	4197	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	-1	intron_retention	FALSE	canonical	3	263	junction_1	213.100687217479	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTATGGGTTTGATT	9414	False	NA	-1	True	NA	NA	NA	126102609	126090880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
Isoform_166090_20	chr7	-	1641	9	ISM	ENSMUSG00000032637.16	ENSMUST00000040202.15	3853	23	8168	3	-1893	-3	3prime_fragment	FALSE	canonical	3	129	junction_1	294.214181124908	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	NA	False	NA	-3	True	NA	NA	NA	126094441	126090882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371
Isoform_1661_4	chr10	-	2179	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	120	-170	101	-99	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTACCTGTGGTTCTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	13428763	13399689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
Isoform_16610_5	chr11	-	944	8	NIC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	-7	-6	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	137.651141421689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTTAATTTCCTCTG	NA	False	NA	23	True	AATATA	-11	NA	100986233	100982988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984641_100985761_100985852_100985983_100986085_100986168
Isoform_16612_211	chr11	-	3110	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	53	2	3	-2	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGTTTCGTTGTGTA	9848	False	NA	-1	True	AATAAA	-27	NA	101010666	100987340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
Isoform_16613_16	chr11	-	3160	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	3	2	3	-2	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGTTTCGTTGTGTA	9798	False	NA	-1	True	AATAAA	-27	NA	101010716	100987340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
Isoform_166130_135	chr7	-	3941	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	97	-3	intron_retention	FALSE	canonical	3	143	junction_21	199.099617268271	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7339	False	NA	-3	True	NA	NA	NA	126101175	126090882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_166131_91	chr7	-	3967	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	71	-3	intron_retention	FALSE	canonical	3	143	junction_21	199.099617268271	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7313	False	NA	-3	True	NA	NA	NA	126101201	126090882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_166133_207	chr7	-	4009	22	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	1	-2	intron_retention	FALSE	canonical	3	238	junction_21	181.885750689423	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTATGGGTTTGAT	6929	False	NA	-2	True	NA	NA	NA	126101585	126090881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
Isoform_166134_333	chr7	-	4354	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-10	2	intron_retention	FALSE	canonical	3	324	junction_21	166.887513543916	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	9486	False	NA	-5	True	NA	NA	NA	126102537	126090884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
Isoform_166142_22	chr7	-	3999	22	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	59	-1	intron_retention	FALSE	canonical	3	137	junction_12	256.469311880599	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTATGGGTTTGATT	7301	False	NA	-1	True	NA	NA	NA	126101213	126090880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_166144_32	chr7	-	4025	22	FSM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	0	-2	0	2	multi-exon	FALSE	canonical	3	137	junction_12	243.863600773697	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	6928	False	NA	-5	True	NA	NA	NA	126101586	126090884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
Isoform_166146_31	chr7	-	4461	22	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	137	junction_12	233.379208318315	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTATGGGTTTGATT	9401	False	NA	-1	True	NA	NA	NA	126102622	126090880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
Isoform_16616_4	chr11	-	3294	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	52	-181	2	-10	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCGGGCATTTGTCAAT	9847	False	NA	NA	False	CATAAA	-12	NA	101010667	100987157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
Isoform_16618_14	chr11	-	2966	8	FSM	ENSMUSG00000017802.15	ENSMUST00000107295.10	3179	8	19	194	19	-3	multi-exon	FALSE	canonical	3	12	junction_5	32.1222155944119	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCTGTTTCGTTGTGT	9864	False	NA	-2	True	AATAAA	-26	NA	101010650	100987341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100994715_100994747_100997132_100997240_101010366
Isoform_166181_491	chr7	-	3012	20	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	43	456	-10	-456	intron_retention	FALSE	canonical	3	1924	junction_14	261.383841247645	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165540	126146082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250
Isoform_166187_1294	chr7	-	2920	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	7	456	7	-456	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165576	126146082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
Isoform_166188_4960	chr7	-	2884	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	43	456	-10	-456	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	4960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165540	126146082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
Isoform_16619_3	chr11	-	2869	6	NIC	ENSMUSG00000017802.15	novel	3179	8	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	41.9456791576916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTTTCGTTGTGTAC	9847	False	NA	0	True	AATAAA	-28	NA	101010667	100987339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100997132_100997240_101010366
Isoform_166190_160	chr7	-	3329	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	43	11	-10	-11	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGACTTGGAG	NA	False	NA	NA	False	NA	NA	NA	126165540	126145637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
Isoform_16620_7	chr11	-	2974	8	NIC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	29.3250606763817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTGCTGTTTCGTTGT	9848	False	NA	-4	True	AATAAA	-24	NA	101010666	100987343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_100989447_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
Isoform_166205_76	chr7	-	1689	15	FSM	ENSMUSG00000030720.17	ENSMUST00000032962.11	2386	15	11	686	-10	0	multi-exon	FALSE	canonical	3	116	junction_11	19.7815880173912	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182408	126171257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
Isoform_166206_9	chr7	-	1820	16	ISM	ENSMUSG00000030720.17	ENSMUST00000116269.9	2487	17	707	686	-7	0	3prime_fragment	FALSE	canonical	3	45	junction_15	32.0638252379358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182745	126171257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474
Isoform_166207_26	chr7	-	1573	16	ISM	ENSMUSG00000030720.17	ENSMUST00000116269.9	2487	17	953	687	-11	-1	3prime_fragment	FALSE	canonical	3	45	junction_15	32.0638252379358	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126182499	126171258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474
Isoform_166208_5	chr7	-	1947	17	FSM	ENSMUSG00000030720.17	ENSMUST00000116269.9	2487	17	-146	686	-119	0	multi-exon	FALSE	canonical	3	21	junction_16	42.5708508694623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126183598	126171257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345
Isoform_166209_10	chr7	-	1851	18	NNC	ENSMUSG00000030720.17	novel	3203	18	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	50.8134521599864	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126184041	126171257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345_126183453_126183991
Isoform_166211_3	chr7	-	1580	16	NIC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_15	37.9013925279211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182501	126171257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182273_126182474
Isoform_166212_21	chr7	-	1623	14	FSM	ENSMUSG00000030720.17	ENSMUST00000098036.9	1571	14	-52	0	5	0	multi-exon	FALSE	canonical	3	16	junction_11	40.0146422904558	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182414	126171257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180817_126180915_126181935_126182015_126182171
Isoform_166213_4	chr7	-	1750	14	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	14	0	intron_retention	FALSE	canonical	3	116	junction_10	20.5074672501933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182384	126171257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
Isoform_166214_4	chr7	-	2030	16	NIC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-118	-1	intron_retention	FALSE	canonical	3	21	junction_15	43.86565348374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126183597	126171258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345
Isoform_166215_29	chr7	-	930	2	FSM	ENSMUSG00000030717.10	ENSMUST00000131174.2	2449	2	1523	-4	-12	1	multi-exon	FALSE	canonical	3	3748	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCGTGTGTTGTGTG	NA	False	NA	-7	True	AATAAA	-17	NA	126224659	126222419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126222752_126224061
Isoform_166217_1936	chr7	-	643	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	187	-1	-14	1	multi-exon	FALSE	canonical	3	3716	junction_2	16	1936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCGTGTGTTGTGTG	NA	False	NA	-7	True	AATAAA	-17	NA	126224661	126222419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126222752_126224061_126224206_126224494
Isoform_166219_41	chr7	-	737	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	93	-1	93	1	multi-exon	FALSE	canonical	3	3716	junction_2	16	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCGTGTGTTGTGTG	NA	False	NA	-7	True	AATAAA	-17	NA	126224755	126222419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126222752_126224061_126224206_126224494
Isoform_166227_137	chr7	-	1937	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	1	1214	1	-4	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	4988	False	NA	NA	False	NA	NA	NA	126294955	126289853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
Isoform_166228_10	chr7	-	1995	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	-57	1214	-57	-4	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	4930	False	NA	NA	False	NA	NA	NA	126295013	126289853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
Isoform_16623_53	chr11	-	3018	13	FSM	ENSMUSG00000035172.16	ENSMUST00000043397.14	3056	13	36	2	2	1	multi-exon	FALSE	canonical	3	20	junction_4	15.6142740963375	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTCCTGTGGGAGTGT	727	False	NA	1	True	AAGAAA	-20	NA	101062141	101053506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
Isoform_166231_26	chr7	-	1885	5	FSM	ENSMUSG00000059772.13	ENSMUST00000142337.7	1390	5	-59	-436	1	-4	multi-exon	FALSE	canonical	3	27	junction_4	31.8276609256791	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	4988	False	NA	NA	False	NA	NA	NA	126294955	126289853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126294596
Isoform_166233_4	chr7	-	2028	5	FSM	ENSMUSG00000059772.13	ENSMUST00000155012.3	1567	5	-25	-436	14	-4	multi-exon	FALSE	canonical	3	82	junction_3	8.78919791562347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	5001	False	NA	NA	False	NA	NA	NA	126294942	126289853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126290828_126290910_126291228_126291492_126291832_126291924_126291977_126294596
Isoform_166235_10	chr7	-	2093	4	NIC	ENSMUSG00000059772.13	novel	1567	5	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	82	junction_2	8.83176086632785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	5019	False	NA	NA	False	NA	NA	NA	126294924	126289853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126291228_126291492_126291832_126291924_126291977_126294596
Isoform_166236_7	chr7	-	2389	3	NIC	ENSMUSG00000059772.13	novel	2062	5	NA	NA	1	-4	intron_retention	FALSE	canonical	3	82	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	4988	False	NA	NA	False	NA	NA	NA	126294955	126289853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126291832_126291924_126291977_126294596
Isoform_166238_5	chr7	-	1595	11	FSM	ENSMUSG00000030707.16	ENSMUST00000032949.14	1660	11	62	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_5	5.95315042645489	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCTCAGACTCCGGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	126303926	126298947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126299158_126299428_126299645_126299755_126299814_126299911_126300058_126300163_126300269_126300461_126300582_126300689_126300875_126300961_126301092_126301177_126301301_126302147_126302347_126303823
Isoform_16624_85	chr11	-	3007	13	FSM	ENSMUSG00000035172.16	ENSMUST00000164474.8	3010	13	2	1	2	-1	multi-exon	FALSE	canonical	3	27	junction_4	14.3843568581366	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTTCCTGTGGGAGT	727	False	NA	-1	True	AAGAAA	-18	NA	101062141	101053508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
Isoform_16625_10	chr11	-	3122	13	FSM	ENSMUSG00000035172.16	ENSMUST00000164474.8	3010	13	-111	-1	-77	1	multi-exon	FALSE	canonical	3	27	junction_4	14.3843568581366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTCCTGTGGGAGTGT	614	False	NA	1	True	AAGAAA	-20	NA	101062254	101053506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
Isoform_166251_434	chr7	-	1408	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	-22	14	-22	-14	multi-exon	FALSE	canonical	3	2424	junction_1	142.291307979548	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAAATAGACTTA	5204	False	NA	NA	False	GATAAA	-34	NA	126391534	126385053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
Isoform_166256_4734	chr7	-	1344	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	-1	16	-1	-14	multi-exon	FALSE	canonical	3	1828	junction_8	282.244574792856	4734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAAATAGACTTA	5069	False	NA	NA	False	GATAAA	-34	NA	126391669	126385053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
Isoform_166258_169	chr7	-	1400	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	-57	16	-57	-14	multi-exon	FALSE	canonical	3	1828	junction_8	282.244574792856	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAAATAGACTTA	5013	False	NA	NA	False	GATAAA	-34	NA	126391725	126385053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
Isoform_16628_3	chr11	-	1192	4	ISM	ENSMUSG00000035172.16	ENSMUST00000139200.8	1410	6	777	5	481	-2	3prime_fragment	FALSE	canonical	3	7	junction_2	35.7801931551832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCTTCCTGTGGGAG	7199	False	NA	-2	True	AAGAAA	-17	NA	101055669	101053509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484
Isoform_16629_9	chr11	-	2998	13	FSM	ENSMUSG00000035172.16	ENSMUST00000129895.8	2635	13	-365	2	-3	1	multi-exon	FALSE	canonical	3	7	junction_2	20.3856907876306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTCCTGTGGGAGTGT	722	False	NA	1	True	AAGAAA	-20	NA	101062146	101053506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
Isoform_166290_1102	chr7	-	1594	10	FSM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	-43	-2	-14	0	multi-exon	FALSE	canonical	3	862	junction_9	8041.23258932084	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398356	126394405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
Isoform_166296_21002	chr7	-	1440	9	FSM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	71	0	-13	0	multi-exon	FALSE	canonical	3	19253	junction_4	564.678448322583	21002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398355	126394405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
Isoform_16630_10	chr11	-	3017	13	NIC	ENSMUSG00000035172.16	novel	3010	13	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	19.5867018379534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTCCTGTGGGAGTGT	694	False	NA	1	True	AAGAAA	-20	NA	101062174	101053506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
Isoform_166325_43	chr7	-	2087	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	1	1	intron_retention	FALSE	canonical	3	206	junction_2	316.419574202949	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTTGTGCTTGGAT	9173	False	NA	-3	True	ATTAAA	-27	NA	126461031	126450755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_166326_68	chr7	-	2046	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	20	1	intron_retention	FALSE	canonical	3	206	junction_2	316.419574202949	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTTGTGCTTGGAT	9214	False	NA	-3	True	ATTAAA	-27	NA	126460990	126450755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_166328_100	chr7	-	1232	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	206	junction_2	316.419574202949	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9179	False	NA	-4	True	ATTAAA	-15	NA	126461025	126451604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_166329_135	chr7	-	1197	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	206	junction_2	316.419574202949	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9214	False	NA	-4	True	ATTAAA	-15	NA	126460990	126451604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_166331_22	chr7	-	1492	9	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	76	junction_8	362.098894468072	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCTTGTCCTTTCCT	9922	False	NA	-7	True	ATTAAA	-12	NA	126461544	126451607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
Isoform_166334_27	chr7	-	1089	7	FSM	ENSMUSG00000030689.16	ENSMUST00000153764.8	719	7	-121	-249	-5	0	multi-exon	FALSE	canonical	3	53	junction_2	323.952156961487	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9179	False	NA	-4	True	ATTAAA	-15	NA	126461025	126451604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126452164_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_166335_26	chr7	-	1073	7	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	312.41341022576	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGTCCTTTCCTCT	9180	False	NA	-5	True	ATTAAA	-14	NA	126461024	126451605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126452164_126456397_126456515_126456847_126456895_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_16634_196	chr11	-	4168	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	26	-1	2	0	multi-exon	FALSE	canonical	3	124	junction_20	14.6399282785128	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2644	False	NA	-7	True	AATAAA	-15	NA	101117250	101081940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
Isoform_166343_363	chr7	-	1969	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	5	-1	5	1	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTTGTGCTTGGAT	9199	False	NA	-3	True	ATTAAA	-27	NA	126461005	126450755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_166344_763	chr7	-	1105	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	20	848	20	0	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9214	False	NA	-4	True	ATTAAA	-15	NA	126460990	126451604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_166345_29	chr7	-	2251	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	4	-1	intron_retention	FALSE	canonical	3	76	junction_7	292.908775936141	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACATGTTTTGTGCTTGG	9921	False	NA	-5	True	ATTAAA	-25	NA	126461545	126450757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
Isoform_166346_80	chr7	-	1401	8	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	76	junction_7	292.908775936141	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCCTTGTCCTTTCCTC	9922	False	NA	-6	True	ATTAAA	-13	NA	126461544	126451606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
Isoform_166355_71	chr7	-	4706	19	FSM	ENSMUSG00000059981.13	ENSMUST00000071268.11	4720	19	15	-1	15	1	multi-exon	TRUE	canonical	3	55	junction_2	21.6270292703766	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGATGTCTCCCTTTT	8448	False	NA	-4	True	AATAAA	-21	NA	126483860	126464848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
Isoform_166359_71	chr7	-	4972	16	FSM	ENSMUSG00000059981.13	ENSMUST00000117394.2	4985	16	15	-2	15	2	multi-exon	FALSE	canonical	3	97	junction_14	9.03228776236797	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCCCAGGCTGCCTC	8448	False	NA	NA	False	NA	NA	NA	126483860	126468672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
Isoform_166365_11	chr7	-	947	6	FSM	ENSMUSG00000060538.15	ENSMUST00000121532.8	915	6	-33	1	-5	-1	multi-exon	FALSE	canonical	3	22	junction_5	16.451139778143	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGTGTAAGGTACTTA	6209	False	NA	-3	True	AATAAA	-13	NA	126497458	126485392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496397_126497395
Isoform_166367_10	chr7	-	714	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	25649	4	22893	-4	3prime_fragment	FALSE	canonical	3	125	junction_3	4.92160768674447	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTTCTTTTTCCCTC	6880	False	NA	-4	True	AATAAA	-17	NA	126588144	126586035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997
Isoform_16637_36	chr11	-	4172	21	NIC	ENSMUSG00000006920.15	novel	4193	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_19	32.178059295116	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	2644	False	NA	-8	True	AATAAA	-14	NA	101117250	101081941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108195_101109479_101109547_101117221
Isoform_166374_18	chr7	-	2797	15	NIC	ENSMUSG00000030681.19	novel	2837	15	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	31.9071516517945	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTTTTCCCTCTT	NA	False	NA	-2	True	AATAAA	-19	NA	126611037	126586033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126610972
Isoform_166375_361	chr7	-	2767	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	66	4	-5	-4	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTTCTTTTTCCCTC	NA	False	NA	-4	True	AATAAA	-17	NA	126613727	126586035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
Isoform_166376_159	chr7	-	2802	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	31	4	31	-4	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTTCTTTTTCCCTC	NA	False	NA	-4	True	AATAAA	-17	NA	126613762	126586035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
Isoform_166378_15	chr7	-	2758	15	NNC	ENSMUSG00000030681.19	novel	2837	15	NA	NA	8097	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	31.9071516517945	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTATGTTTCTTTTTC	NA	False	NA	-8	True	AATAAA	-13	NA	126602940	126586039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126602908
Isoform_166379_173	chr7	-	1353	3	FSM	ENSMUSG00000107068.2	ENSMUST00000202798.2	1412	3	45	14	45	0	multi-exon	FALSE	canonical	3	276	junction_2	10	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCGTGGTGGCGCACG	9475	False	NA	-34	True	AATAAA	-14	NA	126616479	126614236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126614642_126615371_126615455_126615614
Isoform_166381_39	chr7	-	1418	3	FSM	ENSMUSG00000107068.2	ENSMUST00000202798.2	1412	3	-19	13	-19	1	multi-exon	FALSE	canonical	3	276	junction_2	10	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCGTGGTGGCGCACGC	9411	False	NA	-33	True	AATAAA	-15	NA	126616543	126614235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126614642_126615371_126615455_126615614
Isoform_166385_3	chr7	-	1974	2	ISM	ENSMUSG00000107068.2	ENSMUST00000202624.2	569	3	3986	-1314	299	131	3prime_fragment	FALSE	canonical	3	276	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATGCCGGGTGA	9729	False	NA	NA	False	NA	NA	NA	126616225	126614091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126615455_126615614
Isoform_166388_66	chr7	-	2419	5	ISM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	292	12	218	-7	intron_retention	FALSE	canonical	0	0	junction_1	321.496014749794	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	548	False	NA	-39	True	AATAAA	-6	NA	126625406	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475
Isoform_166389_24	chr7	-	2459	5	ISM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	252	12	178	-7	intron_retention	FALSE	canonical	0	0	junction_1	321.496014749794	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	508	False	NA	-39	True	AATAAA	-6	NA	126625446	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475
Isoform_16639_8	chr11	-	2862	15	ISM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	26	7040	2	482	5prime_fragment	FALSE	canonical	3	124	junction_14	16.7309135849706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATACATGGGTTGAG	2644	False	NA	NA	False	NA	NA	NA	101117250	101088981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
Isoform_166399_90	chr7	-	2927	6	FSM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	-277	0	221	0	multi-exon	FALSE	canonical	0	0	junction_1	289.408085581588	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	NA	False	NA	-27	True	AATAAA	-18	NA	126625975	126621301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_166402_41	chr7	-	2524	7	NIC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	310.082784645219	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	NA	False	NA	-39	True	AATAAA	-6	NA	126626220	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
Isoform_166413_121	chr7	-	2234	4	ISM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	178	8	178	-7	intron_retention	FALSE	canonical	3	463	junction_1	152.057737572133	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	508	False	NA	-39	True	AATAAA	-6	NA	126625446	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475
Isoform_166414_255	chr7	-	2194	4	ISM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	218	8	218	-7	intron_retention	FALSE	canonical	3	463	junction_1	152.057737572133	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	548	False	NA	-39	True	AATAAA	-6	NA	126625406	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475
Isoform_166429_266	chr7	-	2653	5	FSM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	-289	-17	-169	13	multi-exon	FALSE	canonical	3	463	junction_1	136.928813622261	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATCTTCACCAAGCCC	41	False	NA	-14	True	AATAAA	-31	NA	126625913	126621288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_16643_972	chr11	-	719	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	166	1	-5	-1	multi-exon	FALSE	canonical	3	1870	junction_1	0	972	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGCTAGTGTGTGGGG	5668	False	NA	-6	True	AATAAA	-19	NA	101169774	101168794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101169279_101169539
Isoform_166434_88	chr7	-	2286	6	FSM	ENSMUSG00000030678.8	ENSMUST00000206254.2	2282	6	-11	7	2	-7	multi-exon	FALSE	canonical	3	90	junction_5	257.403496479749	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	NA	False	NA	-39	True	AATAAA	-6	NA	126626207	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
Isoform_166443_169	chr7	-	2424	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	218	-7	intron_retention	FALSE	canonical	3	387	junction_1	181.38770630889	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	548	False	NA	-39	True	AATAAA	-6	NA	126625406	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475
Isoform_166445_27	chr7	-	2464	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	178	-7	intron_retention	FALSE	canonical	3	387	junction_1	181.38770630889	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	508	False	NA	-39	True	AATAAA	-6	NA	126625446	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475
Isoform_166455_86	chr7	-	2388	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	193	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_1	162.349006772447	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	523	False	NA	-27	True	AATAAA	-18	NA	126625431	126621301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_166456_82	chr7	-	2597	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-29	-8	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_1	162.349006772447	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	301	False	NA	-40	True	AATAAA	-5	NA	126625653	126621314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_166460_76	chr7	-	2848	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-160	-8	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_1	162.349006772447	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	50	False	NA	-40	True	AATAAA	-5	NA	126625904	126621314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_166463_24	chr7	-	2675	7	NNC	ENSMUSG00000030678.8	novel	2282	6	NA	NA	-157	-7	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	241.899944880798	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	NA	False	NA	-39	True	AATAAA	-6	NA	126626366	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
Isoform_166464_77	chr7	-	2517	7	NNC	ENSMUSG00000030678.8	novel	2282	6	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	241.899944880798	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	NA	False	NA	-39	True	AATAAA	-6	NA	126626208	126621313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
Isoform_166478_1840	chr7	-	2082	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	32	1	-30	0	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	1840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7957	False	NA	-7	True	AATACA	-12	NA	126641611	126626903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
Isoform_166479_80	chr7	-	2110	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	4	1	4	0	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7929	False	NA	-7	True	AATACA	-12	NA	126641639	126626903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
Isoform_166480_85	chr7	-	2181	14	NNC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-30	0	intron_retention	FALSE	non_canonical	0	0	junction_7	211.503997192494	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7957	False	NA	-7	True	AATACA	-12	NA	126641611	126626903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631867_126631893_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
Isoform_166484_38	chr7	-	1713	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	183	154	-2	-154	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTTGTTGTTGTTG	NA	False	NA	-6	True	NA	NA	NA	126721215	126706439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
Isoform_166485_71	chr7	-	1211	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	183	656	-2	-656	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATGAGTGGTTGGTAAA	NA	False	NA	1	True	NA	NA	NA	126721215	126706941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
Isoform_166493_45	chr7	-	3322	6	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	1	30	1	-1	intron_retention	FALSE	canonical	3	578	junction_3	18.2274518241031	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5521	False	NA	-2	True	NA	NA	NA	126795109	126791197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532
Isoform_166502_98	chr7	-	2995	7	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	200.670058110876	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	5521	False	NA	-4	True	NA	NA	NA	126795109	126791199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794958
Isoform_166506_61	chr7	-	2869	7	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	198.070413966571	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5521	False	NA	-2	True	NA	NA	NA	126795109	126791197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
Isoform_166511_262	chr7	-	2912	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	4	368	4	-3	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	5462	False	NA	-4	True	NA	NA	NA	126795168	126791199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
Isoform_166512_224	chr7	-	2983	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	-64	365	-14	0	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5394	False	NA	-1	True	NA	NA	NA	126795236	126791196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
Isoform_166535_641	chr7	-	3255	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	20	339	20	-339	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGCCTTGTTATTTGA	1562	False	NA	-2	True	AATGAA	-17	NA	126807620	126796969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_166536_286	chr7	-	3524	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-13	103	-13	-103	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACGTCTCTGTTTTCTG	1529	False	NA	-1	True	NA	NA	NA	126807653	126796733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_166538_47	chr7	-	3626	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-14	2	-14	-2	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGTGGTCCAGCTCCT	1528	False	NA	NA	False	AGTAAA	-25	NA	126807654	126796632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_166540_152	chr7	-	3411	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-136	339	-136	-339	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGCCTTGTTATTTGA	1406	False	NA	-2	True	AATGAA	-17	NA	126807776	126796969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_166542_102	chr7	-	3642	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-132	104	-132	-104	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTACGTCTCTGTTTTCT	1410	False	NA	-2	True	NA	NA	NA	126807772	126796734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_166545_15	chr7	-	3487	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-211	338	-211	-338	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGCCTTGTTATTTGAA	1331	False	NA	-1	True	AATGAA	-18	NA	126807851	126796968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_16655_837	chr11	-	2020	12	FSM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	35	2310	0	0	multi-exon	FALSE	canonical	3	365	junction_8	49.9747043451001	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193077	101179087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
Isoform_166553_4	chr7	-	544	2	FSM	ENSMUSG00000000486.14	ENSMUST00000131208.2	575	2	36	-5	36	5	multi-exon	FALSE	canonical	3	372	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGAGTCTTCTTCCC	NA	False	NA	-2	True	AATAAA	-23	NA	126814261	126813613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126814017_126814120
Isoform_166556_10	chr7	-	1514	11	NIC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	2	5	combination_of_known_junctions	TRUE	canonical	3	14	junction_10	96.582658898997	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGAGTCTTCTTCCC	NA	False	NA	-2	True	AATAAA	-23	NA	126817596	126813613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817496
Isoform_166557_281	chr7	-	1463	11	FSM	ENSMUSG00000000486.14	ENSMUST00000106314.8	1486	11	43	-20	16	5	multi-exon	FALSE	canonical	3	221	junction_10	48.9043965303734	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGAGTCTTCTTCCC	NA	False	NA	-2	True	AATAAA	-23	NA	126817627	126813613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
Isoform_166558_6	chr7	-	1559	10	NIC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	11	3	intron_retention	FALSE	canonical	3	221	junction_9	51.3653099058927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCGGAGTCTTCTTC	NA	False	NA	-4	True	AATAAA	-21	NA	126817632	126813615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
Isoform_166561_5	chr7	-	2447	7	NIC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	221	junction_6	54.3874985635486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGGAGTCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	126817629	126813618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126817404_126817578
Isoform_166565_2200	chr7	-	615	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	57	4	57	-4	multi-exon	FALSE	canonical	3	3852	junction_1	65	2200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTCGATTTTTCTT	2547	False	NA	-5	True	AATAAA	-14	NA	126859824	126856134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126856509_126858529_126858641_126859694
Isoform_166566_299	chr7	-	654	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	18	4	18	-4	multi-exon	FALSE	canonical	3	3852	junction_1	65	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTCGATTTTTCTT	2508	False	NA	-5	True	AATAAA	-14	NA	126859863	126856134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126856509_126858529_126858641_126859694
Isoform_166569_26	chr7	-	2537	2	FSM	ENSMUSG00000047371.8	ENSMUST00000060783.7	2356	2	-182	1	-16	-1	multi-exon	FALSE	canonical	3	6	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTCGTCCTTAAGATG	5139	False	NA	-2	True	AATAAA	-15	NA	126944777	126941967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126944048_126944320
Isoform_16657_12	chr11	-	1975	11	NIC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	144.198509007548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193100	101179087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101192553_101192683_101192957
Isoform_166571_3	chr7	-	2819	2	FSM	ENSMUSG00000054381.6	ENSMUST00000206942.2	750	2	-26	-2043	8	3	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTCTGCTCCTCATT	923	False	NA	NA	False	NA	NA	NA	126975214	126971705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126973871_126974560
Isoform_166572_56	chr7	-	2669	3	FSM	ENSMUSG00000054381.6	ENSMUST00000067425.6	2684	3	16	-1	16	1	multi-exon	FALSE	canonical	3	22	junction_2	4	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGATTTCTGCTCCTCA	931	False	NA	NA	False	NA	NA	NA	126975206	126971707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126973871_126974560_126974675_126974814
Isoform_166576_9	chr7	-	2826	3	FSM	ENSMUSG00000030823.7	ENSMUST00000049052.4	3878	3	-10	1062	-10	-46	multi-exon	FALSE	canonical	2	4	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTATTGTATGTTATG	NA	False	NA	NA	False	CATAAA	-15	NA	126986348	126982493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126984803_126985691_126985806_126985945
Isoform_166578_14	chr7	-	2480	3	FSM	ENSMUSG00000045757.7	ENSMUST00000059199.7	2508	3	29	-1	-10	1	multi-exon	FALSE	canonical	2	4	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGATTTCTGCTCCTCA	8630	False	NA	NA	False	AATAAA	-20	NA	127005965	127002838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127004832_127005337_127005452_127005592
Isoform_16658_72	chr11	-	2653	11	FSM	ENSMUSG00000035086.14	ENSMUST00000122817.8	2662	11	9	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	42.6812605249658	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193077	101179087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
Isoform_166580_5	chr7	-	1402	3	ISM	ENSMUSG00000045251.14	ENSMUST00000148483.8	1302	4	2	2	2	0	intron_retention	FALSE	canonical	3	32	junction_2	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	1	True	NA	-6	True	ATTAAA	-15	NA	127021209	127018140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_127018814_127019181_127019278_127020576
Isoform_166581_8	chr7	-	1292	4	FSM	ENSMUSG00000045251.14	ENSMUST00000148483.8	1302	4	8	2	3	0	multi-exon	FALSE	canonical	3	9	junction_3	18.7794213613377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6921	False	NA	-6	True	ATTAAA	-15	NA	127021203	127018140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127018814_127019181_127019278_127020576_127020691_127020794
Isoform_166582_23	chr7	-	1099	4	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	9.62635271879577	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6930	False	NA	-4	True	ATTAAA	-17	NA	127021194	127018138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127018814_127019181_127019278_127020576_127020691_127020980
Isoform_166583_5	chr7	-	1023	3	NIC	ENSMUSG00000045251.14	novel	492	3	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	25.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6890	False	NA	-6	True	ATTAAA	-15	NA	127021234	127018140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127018814_127019181_127019278_127020980
Isoform_166584_5	chr7	-	1115	4	NNC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	22.196095752782	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAGTGTTTTGTGTTA	1	True	NA	-7	True	ATTAAA	-14	NA	127021209	127018141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_127018814_127019181_127019282_127020576_127020691_127020980
Isoform_166585_3	chr7	-	1011	3	NNC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	27	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6908	False	NA	-4	True	ATTAAA	-17	NA	127021216	127018138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_127018814_127019181_127019282_127020980
Isoform_166586_10	chr7	-	1293	2	FSM	ENSMUSG00000045251.14	ENSMUST00000136123.8	1298	2	5	0	5	0	multi-exon	FALSE	canonical	3	34	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6930	False	NA	-4	True	ATTAAA	-17	NA	127021194	127018138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127018814_127020576
Isoform_166587_10	chr7	-	1189	3	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	12.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6930	False	NA	-4	True	ATTAAA	-17	NA	127021194	127018138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127018814_127020576_127020691_127020794
Isoform_166588_37	chr7	-	1009	3	FSM	ENSMUSG00000045251.14	ENSMUST00000106300.2	1015	3	6	0	-1	0	multi-exon	FALSE	canonical	3	34	junction_1	2.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6924	False	NA	-4	True	ATTAAA	-17	NA	127021200	127018138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127018814_127020576_127020691_127020980
Isoform_166589_12	chr7	-	913	2	FSM	ENSMUSG00000045251.14	ENSMUST00000126756.2	338	2	-196	-379	-7	0	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6906	False	NA	-4	True	ATTAAA	-17	NA	127021218	127018138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127018814_127020980
Isoform_166590_80	chr7	-	1980	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	24	1617	24	2	multi-exon	FALSE	canonical	3	47	junction_1	4.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGTCTTAAAATAATATG	4381	False	NA	-1	True	ATTAAA	-14	NA	127048306	127042924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127044310_127047534_127047649_127047825
Isoform_166593_21	chr7	-	3506	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	117	-2	-48	2	multi-exon	FALSE	canonical	3	47	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCTCCTTCTGGAATT	4474	False	NA	NA	False	ATTAAA	-16	NA	127048213	127041305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127044310_127047534_127047649_127047825
Isoform_166594_4	chr7	-	1097	2	ISM	ENSMUSG00000048921.12	ENSMUST00000106299.2	1417	4	-151	4116	14	-4116	5prime_fragment	FALSE	canonical	3	56	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGGCTTGGGGAGAAGA	4371	False	NA	NA	False	NA	NA	NA	127048316	127047042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_127047649_127047825
Isoform_166595_7	chr7	-	1141	9	FSM	ENSMUSG00000057176.5	ENSMUST00000072155.5	2536	9	417	978	-9	-1	multi-exon	FALSE	canonical	3	15	junction_4	3.80788655293195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCACGAGCACCTTCTGG	8703	False	NA	-5	True	AATAAA	-29	NA	127187350	127182532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127184434_127184625_127184697_127185446_127185617_127185994_127186061_127186735_127186768_127187048
Isoform_166596_3	chr7	-	1339	8	NIC	ENSMUSG00000057176.5	novel	2536	9	NA	NA	-14	0	intron_retention	FALSE	canonical	3	22	junction_2	2.18529407725405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACGAGCACCTTCTGGG	8698	False	NA	-4	True	AATAAA	-30	NA	127187355	127182531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127184697_127185446_127185617_127185994_127186061_127186735_127186768_127187048
Isoform_166597_5	chr7	-	5794	3	FSM	ENSMUSG00000045639.15	ENSMUST00000084564.10	5829	3	31	4	17	-4	multi-exon	FALSE	canonical	2	2	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTTGTTTTTACTTCTT	4433	False	NA	-4	True	AATAAA	-14	NA	127214413	127206206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127211735_127211838_127211946_127214254
Isoform_1666_3	chr10	-	1325	12	FSM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	2	634	2	-634	multi-exon	FALSE	canonical	2	10	junction_11	40.2069029063706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTCATTTCATAATG	NA	False	NA	-6	True	AATAAA	-15	NA	13428862	13400519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428692
Isoform_166600_22	chr7	-	4506	6	FSM	ENSMUSG00000030814.18	ENSMUST00000205977.2	891	6	-155	-3460	-9	-1880	multi-exon	FALSE	canonical	3	31	junction_1	191.890176924198	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGTGTATCCACTGTTT	NA	False	NA	-10	True	GATAAA	-14	NA	127307966	127262507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
Isoform_166602_451	chr7	-	971	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	160	1	12	-1	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTCATGTCATTTC	NA	False	NA	NA	False	AATAAA	-13	NA	127307945	127304150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
Isoform_166603_20	chr7	-	1090	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	42	0	42	0	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	127308063	127304149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
Isoform_166605_13	chr7	-	1152	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	-21	1	-21	-1	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTCATGTCATTTC	NA	False	NA	NA	False	AATAAA	-13	NA	127308126	127304150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
Isoform_166607_30	chr7	-	2829	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	-8	2947	-8	-1	multi-exon	FALSE	canonical	3	42	junction_2	4	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTTCTGTATTGTGG	NA	False	NA	1	True	ATTAAA	-19	NA	127476008	127465165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_166608_33	chr7	-	2591	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	230	2947	179	-1	multi-exon	FALSE	canonical	3	42	junction_2	4	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTTCTGTATTGTGG	NA	False	NA	1	True	ATTAAA	-19	NA	127475770	127465165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_166609_44	chr7	-	2143	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	678	2947	-16	-1	multi-exon	FALSE	canonical	3	42	junction_2	4	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTTCTGTATTGTGG	NA	False	NA	1	True	ATTAAA	-19	NA	127475322	127465165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_16661_12	chr11	-	2827	11	NIC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	365	junction_7	51.9161824482502	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAAGTGGTACGCCTGT	NA	False	NA	-5	True	AATAAA	-22	NA	101193065	101179090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
Isoform_166611_11	chr7	-	2485	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	681	2602	-13	68	multi-exon	FALSE	canonical	3	42	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTATGTGGCTTTGTTTA	NA	False	NA	NA	False	ACTAAA	-35	NA	127475319	127464820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_166613_4	chr7	-	2907	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	719	2142	25	528	multi-exon	FALSE	canonical	3	42	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAGAATGGATGA	NA	False	NA	NA	False	NA	NA	NA	127475281	127464360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_166615_4	chr7	-	3123	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	39	2606	-9	64	multi-exon	FALSE	canonical	3	42	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACCTATGTGGCTTTG	NA	False	NA	NA	False	ACTAAA	-31	NA	127475961	127464824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_166616_207	chr7	-	732	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	15	1	15	-1	multi-exon	FALSE	canonical	3	262	junction_2	18.5	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTAGCATATGTCTGC	NA	False	NA	-12	True	AATAAA	-18	NA	127494774	127492235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127492664_127493676_127493787_127494580
Isoform_166619_11	chr7	-	1671	6	FSM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	71	110	62	-110	multi-exon	FALSE	canonical	3	26	junction_4	2.78567765543682	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTCTGTGAGATGAA	NA	False	NA	0	True	AATAAA	-31	NA	127529205	127524997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969
Isoform_166620_9	chr7	-	1778	6	FSM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	-37	111	-37	-111	multi-exon	FALSE	canonical	3	26	junction_4	2.78567765543682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTGTCTGTGAGATGA	NA	False	NA	-1	True	AATAAA	-30	NA	127529313	127524998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969
Isoform_166621_3	chr7	-	1842	6	FSM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	10	0	1	0	multi-exon	FALSE	canonical	3	26	junction_4	2.78567765543682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTACACATATTTACAG	NA	False	NA	NA	False	AATAAA	-14	NA	127529266	127524887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969
Isoform_166622_9	chr7	-	1729	6	FSM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	10	113	1	-113	multi-exon	FALSE	canonical	3	26	junction_4	2.78567765543682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTGTCTGTGAGAT	NA	False	NA	-3	True	AATAAA	-28	NA	127529266	127525000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969
Isoform_166623_3	chr7	-	1863	6	FSM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	26	junction_4	2.78567765543682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTACACATATTTACAG	NA	False	NA	NA	False	AATAAA	-14	NA	127529287	127524887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969
Isoform_166624_6	chr7	-	2634	2	ISM	ENSMUSG00000070371.12	ENSMUST00000152697.3	1052	5	-8	0	-8	0	intron_retention	FALSE	canonical	3	106	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534699	127531809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_127532287_127532542
Isoform_166626_4	chr7	-	2550	3	ISM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	-38	0	2	0	intron_retention	FALSE	canonical	3	62	junction_2	22	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534689	127531809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_127532287_127532542_127532665_127532738
Isoform_166629_4	chr7	-	1290	6	FSM	ENSMUSG00000070371.12	ENSMUST00000156152.3	1132	6	-5	-153	-5	-8	multi-exon	FALSE	canonical	3	17	junction_5	34.92506263416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGACACGTGGCTTTG	NA	False	NA	NA	False	AATAAA	-7	NA	127534627	127531817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533310_127533453_127533561_127533800_127534574
Isoform_166630_11	chr7	-	1283	6	NIC	ENSMUSG00000070371.12	novel	3028	15	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_4	32.2093154227158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534656	127531809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533310_127533453_127533561_127533800_127534618
Isoform_166633_23	chr7	-	1170	5	NIC	ENSMUSG00000070371.12	novel	3028	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	30.0863341070327	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534685	127531809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533561_127533800_127534618
Isoform_166635_28	chr7	-	1050	5	FSM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	-34	0	1	0	multi-exon	FALSE	canonical	3	15	junction_3	32.1820990614348	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534685	127531809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534618
Isoform_166636_5	chr7	-	1639	4	NNC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	42.1979462375442	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGTGGCTTTGTGGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	127534601	127531811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533825
Isoform_166638_15	chr7	-	892	4	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	36.3409777890836	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGTGGCTTTGTGGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	127534675	127531811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127532287_127532542_127532665_127533561_127533800_127534618
Isoform_166639_8	chr7	-	751	4	NIC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	40.8683523306509	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGGCTTTGTGGCATC	NA	False	NA	NA	False	AATAAA	-14	NA	127534653	127531810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127532287_127532542_127532665_127533681_127533800_127534618
Isoform_166640_804	chr7	-	744	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	131	2925	131	-993	multi-exon	FALSE	canonical	3	1219	junction_2	45	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGGATGTTTTTGCT	NA	False	NA	-5	True	AAAACA	-18	NA	127592908	127591804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127592138_127592286_127592344_127592554
Isoform_166641_21	chr7	-	3659	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	129	12	129	-12	multi-exon	FALSE	canonical	3	1219	junction_2	45	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAACAAACATT	NA	False	NA	NA	False	ATTAAA	-7	NA	127592910	127588891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127592138_127592286_127592344_127592554
Isoform_166644_33	chr7	-	1289	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	123	2388	123	-456	multi-exon	FALSE	canonical	3	1219	junction_2	45	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAAGCCTTTTTTTTTTT	NA	False	NA	-4	True	NA	NA	NA	127592916	127591267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127592138_127592286_127592344_127592554
Isoform_166649_18	chr7	-	444	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	57	179	57	-179	multi-exon	FALSE	canonical	3	110	junction_1	3.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTCTGGCTCTTTGG	5440	False	NA	-6	True	AATAAA	-14	NA	127805502	127804785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127804985_127805071_127805209_127805394
Isoform_166650_5	chr7	-	770	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	-94	4	-94	-4	multi-exon	FALSE	canonical	3	110	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTCAGTCTTGTGTTAG	5289	False	NA	NA	False	AATACA	-16	NA	127805653	127804610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127804985_127805071_127805209_127805394
Isoform_166651_5	chr7	-	611	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	65	4	65	-4	multi-exon	FALSE	canonical	3	110	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTCAGTCTTGTGTTAG	5448	False	NA	NA	False	AATACA	-16	NA	127805494	127804610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127804985_127805071_127805209_127805394
Isoform_166652_7	chr7	-	573	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	-72	179	-72	-179	multi-exon	FALSE	canonical	3	110	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTCTGGCTCTTTGG	5311	False	NA	-6	True	AATAAA	-14	NA	127805631	127804785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127804985_127805071_127805209_127805394
Isoform_166654_213	chr7	-	2562	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	65	0	3	0	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTTCATACTGCAGGC	1171	False	NA	-16	True	AGTAAA	-16	NA	127897277	127870550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
Isoform_166655_19	chr7	-	1676	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	37	914	-24	33	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTTCCTTTTCTGG	1143	False	NA	-2	True	NA	NA	NA	127897305	127871464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
Isoform_166658_5	chr7	-	2320	13	NNC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	-143	10	intron_retention	FALSE	canonical	0	0	junction_12	45.7426375375195	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCAGGCCTCTGGCCTC	963	False	NA	-6	True	AGTAAA	-26	NA	127897485	127870540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127897421
Isoform_166659_5	chr7	-	2026	7	NIC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	3502	9	intron_retention	FALSE	canonical	3	141	junction_4	13.9164171634321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCAGGCCTCTGGCCT	9097	False	NA	-7	True	AGTAAA	-25	NA	127884375	127870541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875738_127884284
Isoform_166660_4	chr7	-	2644	12	NIC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	141	junction_4	13.331129294417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTTCATACTGCAGGC	1171	False	NA	-16	True	AGTAAA	-16	NA	127897277	127870550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
Isoform_166662_9	chr7	-	704	3	FSM	ENSMUSG00000030844.12	ENSMUST00000134144.2	458	3	16	-262	16	-2	multi-exon	FALSE	canonical	1	3	junction_2	8	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTAGTCATTTCTAC	9767	False	NA	NA	False	ATTAAA	-22	NA	127995393	127975346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127975767_127990687_127990832_127995253
Isoform_166667_4	chr7	-	1892	13	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	62	9	intron_retention	FALSE	canonical	3	7	junction_8	79.2973920686481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTTGATATAATAGGA	NA	False	NA	NA	False	AATAAA	-24	NA	128063314	128043994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128048454_128048523_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_166671_7	chr7	-	1885	13	FSM	ENSMUSG00000030846.16	ENSMUST00000106228.8	2835	13	82	868	61	9	multi-exon	FALSE	canonical	3	12	junction_12	81.5772895275803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTTGATATAATAGGA	NA	False	NA	NA	False	AATAAA	-24	NA	128063315	128043994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128060320_128060381_128062848
Isoform_166673_16	chr7	-	4112	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-24	-2508	-24	5	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTAGTGTTGTTCAT	NA	False	NA	-1	True	AATAAA	-21	NA	128063103	128041495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_166674_72	chr7	-	1860	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-282	2	15	-2	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGACTATAAATTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	128063361	128044005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_166675_120	chr7	-	1586	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	5	-11	-4	11	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTGATATAATAGGAGA	NA	False	NA	NA	False	AATAAA	-26	NA	128063074	128043992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_166682_5	chr7	-	4324	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-236	-2508	61	5	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTAGTGTTGTTCAT	NA	False	NA	-1	True	AATAAA	-21	NA	128063315	128041495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_166683_4	chr7	-	1651	12	FSM	ENSMUSG00000030846.16	ENSMUST00000106226.9	4451	12	295	2505	-22	-2	multi-exon	FALSE	canonical	3	18	junction_10	64.264304450031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGACTATAAATTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	128063101	128044005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
Isoform_166685_17	chr7	-	2180	11	FSM	ENSMUSG00000030846.16	ENSMUST00000141079.8	4266	11	42	2044	42	11	multi-exon	FALSE	canonical	3	163	junction_6	28.929051142407	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTGATATAATAGGAGA	NA	False	NA	NA	False	AATAAA	-26	NA	128063334	128043992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_166689_689	chr7	-	2486	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	6	1745	-3	1	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGCTGATCACACCATT	3868	False	NA	NA	False	ATTAAA	-16	NA	128342213	128299909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
Isoform_166690_408	chr7	-	2906	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	6	1325	-3	1	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCCTTAACTTTT	3868	False	NA	-13	True	NA	NA	NA	128342213	128299489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
Isoform_166694_184	chr7	-	3704	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	6	527	-3	-527	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTTCTTTGTCCTAGA	3868	False	NA	-4	True	AATAAA	-24	NA	128342213	128298691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
Isoform_166699_36	chr7	-	3864	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	6	367	-3	-367	multi-exon	TRUE	canonical	3	440	junction_10	48.8278608992858	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCATGGGCCATTTTTCAT	3868	False	NA	NA	False	AATAAA	-17	NA	128342213	128298531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
Isoform_1667_3	chr10	-	1898	12	FSM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	88	-25	88	-1	multi-exon	FALSE	canonical	2	10	junction_11	40.2069029063706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTTTAGCCATTAATT	NA	False	NA	NA	False	AATAAA	-33	NA	13428776	13399860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428692
Isoform_16671_750	chr11	-	1298	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	216	2	7	-2	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTTGTATACTGCCA	NA	False	NA	-23	True	AGTAAA	-14	NA	101308225	101297666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
Isoform_166712_4	chr7	-	4674	18	FSM	ENSMUSG00000030849.19	ENSMUST00000122054.8	3323	18	-94	-1257	-22	-1	multi-exon	FALSE	non_canonical	0	0	junction_9	5.16643412059917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTCGTGTCTTACCAAAT	NA	False	NA	NA	False	AATAAA	-23	NA	129868015	129764181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797901_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129844107_129844375_129863478_129863797_129867523
Isoform_166714_3	chr7	-	4498	17	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	-22	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	4.83113276054385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCGTGTCTTACCAAA	NA	False	NA	NA	False	AATAAA	-22	NA	129868015	129764182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_129765946_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797901_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129863478_129863797_129867523
Isoform_166716_6	chr7	-	4820	13	FSM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	-75	-3065	-6	0	multi-exon	FALSE	canonical	3	14	junction_6	69.1801191737112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121266	129993222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
Isoform_166717_129	chr7	-	4699	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	-16	2	-16	-2	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTCGGCCGTGGTT	NA	False	NA	-17	True	AATAAA	-14	NA	130121276	129993224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
Isoform_16672_50	chr11	-	1471	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	221	-176	-10	176	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTATAGTTGCTTA	NA	False	NA	0	True	ATTAAA	-41	NA	101308220	101297488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
Isoform_166722_108	chr7	-	4689	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	44	2	-6	-2	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTCGGCCGTGGTT	NA	False	NA	-17	True	AATAAA	-14	NA	130121266	129993224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
Isoform_166732_1323	chr7	-	1354	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	83	-2	83	2	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATCGTTTTTATTGTC	NA	False	NA	-5	True	ATTAAA	-24	NA	130149028	130134253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
Isoform_166733_379	chr7	-	1433	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	2	0	2	0	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	-7	True	ATTAAA	-22	NA	130149109	130134255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
Isoform_166734_37	chr7	-	1517	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	-80	-2	-80	2	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATCGTTTTTATTGTC	NA	False	NA	-5	True	ATTAAA	-24	NA	130149191	130134253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
Isoform_16674_253	chr11	-	1323	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	191	2	-18	-2	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTTGTATACTGCCA	NA	False	NA	-23	True	AGTAAA	-14	NA	101308250	101297666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
Isoform_166742_54	chr7	-	2222	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	54	4497	5	469	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGATTACGTTGTTTCT	NA	False	NA	-6	True	AATAGA	-14	NA	130964434	130944445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
Isoform_166743_8	chr7	-	2270	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	7	4496	7	470	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATTACGTTGTTTCTT	NA	False	NA	-5	True	AATAGA	-15	NA	130964481	130944444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
Isoform_166747_6	chr7	-	3293	5	ISM	ENSMUSG00000040177.11	ENSMUST00000208526.2	3703	6	-14	5311	0	2432	5prime_fragment	FALSE	canonical	3	85	junction_4	3.96074487943871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	130964439	130950225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
Isoform_16675_18	chr11	-	1501	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	191	-176	-18	176	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTATAGTTGCTTA	NA	False	NA	0	True	ATTAAA	-41	NA	101308250	101297488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
Isoform_166750_5	chr7	-	3960	4	FSM	ENSMUSG00000040167.17	ENSMUST00000121033.8	2231	4	-16	-1713	8	-3	multi-exon	FALSE	canonical	2	3	junction_1	34.7658836600865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGACTTTTGTTTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	131012242	130990383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_130993851_130995483_130995667_130998397_130998581_131012115
Isoform_166751_143	chr7	-	4405	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	24	1	0	-1	multi-exon	TRUE	canonical	3	63	junction_1	6.97614984548545	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTTTGTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	131012226	130990381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
Isoform_166758_550	chr7	-	2100	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	52	0	52	0	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGATGTGAATCTATTTA	NA	False	NA	-5	True	AATAAA	-24	NA	132178075	132159206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
Isoform_166759_311	chr7	-	2139	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	13	0	13	0	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGATGTGAATCTATTTA	NA	False	NA	-5	True	AATAAA	-24	NA	132178114	132159206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
Isoform_166766_82	chr7	-	3257	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	8	-1	8	1	multi-exon	FALSE	canonical	3	59	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACGAATTATTCATC	NA	False	NA	NA	False	AATAAA	-18	NA	132201358	132196605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132199546_132201041
Isoform_166767_16	chr7	-	3528	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	8	-272	8	272	multi-exon	FALSE	canonical	3	59	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGTCTACTCTCTAA	NA	False	NA	NA	False	AGTAAA	-20	NA	132201358	132196334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132199546_132201041
Isoform_166768_22	chr7	-	3417	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	-152	-1	-152	1	multi-exon	FALSE	canonical	3	59	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACGAATTATTCATC	NA	False	NA	NA	False	AATAAA	-18	NA	132201518	132196605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132199546_132201041
Isoform_166772_4	chr7	-	4877	4	FSM	ENSMUSG00000030956.16	ENSMUST00000106168.2	3630	4	34	-1281	34	0	multi-exon	FALSE	canonical	0	0	junction_3	51.1490197581754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132378611	132313812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132378484
Isoform_166774_5	chr7	-	5600	5	FSM	ENSMUSG00000030956.16	ENSMUST00000097999.9	5465	5	-131	-4	70	4	multi-exon	FALSE	canonical	3	27	junction_4	41.3430768085782	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGCATGGCTGTGTG	NA	False	NA	-8	True	AATAAA	-23	NA	132415388	132313806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132414794
Isoform_166776_8	chr7	-	5511	5	FSM	ENSMUSG00000030956.16	ENSMUST00000097999.9	5465	5	-50	4	-50	-2	multi-exon	FALSE	canonical	3	27	junction_4	41.3430768085782	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGGCTGCCTGCGCATG	NA	False	NA	-16	True	AATAAA	-15	NA	132415307	132313814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132414794
Isoform_166779_40	chr7	-	5306	5	NIC	ENSMUSG00000030956.16	novel	5052	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132415615	132313812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
Isoform_166787_43	chr7	-	5122	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	38.4537059332387	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGGCTGCCTGCGCATG	NA	False	NA	-16	True	AATAAA	-15	NA	132415615	132313814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415491
Isoform_166793_3	chr7	-	2533	10	Fusion	ENSMUSG00000030960.17_ENSMUSG00000030956.16	novel	1107	6	NA	NA	14	-2037	multi-exon	FALSE	canonical	3	29	junction_4	122.307243155894	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTCTTTGTTCCTTAC	NA	False	NA	NA	False	AAAACA	-17	NA	132454388	132317130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
Isoform_166794_16	chr7	-	5825	10	Fusion	ENSMUSG00000030960.17_ENSMUSG00000030956.16	novel	1107	6	NA	NA	-11	4	multi-exon	FALSE	canonical	3	29	junction_4	122.307243155894	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGCATGGCTGTGTG	NA	False	NA	-8	True	AATAAA	-23	NA	132454356	132313806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
Isoform_166795_6	chr7	-	5811	10	Fusion	ENSMUSG00000030960.17_ENSMUSG00000030956.16	novel	1107	6	NA	NA	-11	0	multi-exon	FALSE	canonical	3	29	junction_4	114.264799673585	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	False	NA	-18	True	AATAAA	-13	NA	132454356	132313816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
Isoform_166796_3	chr7	-	5182	4	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	67	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	42.9754451854648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACACCCGGCTGCCTGCGC	NA	False	NA	-19	True	AATAAA	-12	NA	132415548	132313817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132317732_132361117_132361897_132380864_132381115_132415309
Isoform_166797_3	chr7	-	3071	4	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	67	-835	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	42.9754451854648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTGTTTCAACTTTAA	NA	False	NA	NA	False	AAGAAA	-14	NA	132415548	132315928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132317732_132361117_132361897_132380864_132381115_132415309
Isoform_166798_12	chr7	-	4498	4	NIC	ENSMUSG00000030956.16	novel	4341	4	NA	NA	24	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	49.9355139710763	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACACCCGGCTGCCTGCGC	NA	False	NA	-19	True	AATAAA	-12	NA	132415591	132313817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132317732_132373306_132373359_132380864_132381115_132415309
Isoform_166801_9	chr7	-	4313	4	FSM	ENSMUSG00000030956.16	ENSMUST00000097998.9	4341	4	32	-4	32	0	multi-exon	FALSE	canonical	3	17	junction_1	53.4852004452322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132415583	132313812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132317732_132373306_132373359_132380864_132381115_132415491
Isoform_166803_3	chr7	-	2229	4	FSM	ENSMUSG00000030956.16	ENSMUST00000097998.9	4341	4	-2	2114	-2	-837	multi-exon	FALSE	canonical	3	17	junction_1	53.4852004452322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTTTGTTTCAACTTT	NA	False	NA	NA	False	AAGAAA	-12	NA	132415617	132315930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132317732_132373306_132373359_132380864_132381115_132415491
Isoform_166804_23	chr7	-	1087	6	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	-15	-5	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	113.265352160314	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTTTTTGGTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	132454383	132429190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
Isoform_166805_5	chr7	-	1311	6	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	-10	224	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	113.265352160314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTAGAGATAATGTCT	NA	False	NA	-9	True	ATTAAA	-17	NA	132454378	132428961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
Isoform_166806_128	chr7	-	1056	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	46	5	-11	-5	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTTTTTGGTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	132454356	132429190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
Isoform_166807_17	chr7	-	1290	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	45	-228	11	228	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAGATAATGTCTCACT	NA	False	NA	-5	True	ATTAAA	-21	NA	132454357	132428957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
Isoform_166809_3	chr7	-	846	5	NIC	ENSMUSG00000030960.17	novel	563	5	NA	NA	9	-5	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	164.442049062884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTTTTTGGTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	132454359	132429190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132429612_132438828_132438937_132452319_132452439_132453154_132453221_132454227
Isoform_166810_5	chr7	-	840	5	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	11	-5	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	142.065785817698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTTTTTGGTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	132454357	132429190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132429612_132438828_132438937_132452323_132452439_132453154_132453221_132454227
Isoform_166811_3	chr7	-	738	4	NIC	ENSMUSG00000030960.17	novel	573	4	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	170.763644322269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTTTTTGGTTTTTGT	NA	False	NA	NA	False	AGTAAA	-16	NA	132454356	132429187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132429612_132452319_132452439_132453154_132453221_132454227
Isoform_166812_8	chr7	-	2063	3	FSM	ENSMUSG00000030960.17	ENSMUST00000154914.2	811	3	6	-1258	6	1258	multi-exon	FALSE	canonical	3	351	junction_1	20.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTGGTACTGTGGAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	132454362	132450576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132452439_132453154_132453221_132454227
Isoform_166831_607	chr7	-	2319	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	3	-1	3	1	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	7	True	AGTAAA	-14	NA	132725093	132589348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
Isoform_166833_257	chr7	-	2346	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	-24	-1	-24	1	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	7	True	AGTAAA	-14	NA	132725120	132589348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
Isoform_166836_239	chr7	-	2933	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	1	-613	1	555	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCCTGACATTTAAGTA	NA	False	NA	-15	True	AATAAA	-18	NA	132725095	132588736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
Isoform_166837_118	chr7	-	2959	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	-23	-615	-23	557	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTGACATTTAAGTACA	NA	False	NA	-13	True	AATAAA	-20	NA	132725119	132588734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
Isoform_166850_24	chr7	-	5459	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	-23	-3115	-23	3057	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCGTGGATAATTTG	NA	False	NA	-12	True	AATAAA	-21	NA	132725119	132586234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
Isoform_166854_67	chr7	-	2519	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	261.929300914743	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725596	132589349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132725085_132725386
Isoform_166855_38	chr7	-	3130	12	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-11	552	combination_of_known_junctions	FALSE	canonical	3	44	junction_11	251.022010164003	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCCTGACATTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	132725596	132588739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132725086_132725386
Isoform_166866_178	chr7	-	2162	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	-201	36	0	1	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	7	True	AGTAAA	-14	NA	132725096	132589348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
Isoform_166868_64	chr7	-	2186	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	-225	36	-24	1	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	7	True	AGTAAA	-14	NA	132725120	132589348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
Isoform_166872_66	chr7	-	2772	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	-198	-577	3	556	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	NA	False	NA	-14	True	AATAAA	-19	NA	132725093	132588735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
Isoform_166884_10	chr7	-	1631	10	FSM	ENSMUSG00000030979.14	ENSMUST00000106145.10	1644	10	11	2	-1	-2	multi-exon	FALSE	canonical	3	14	junction_9	18.4477908610847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGATCTGAGTATGGTA	NA	False	NA	NA	False	NA	NA	NA	133310787	133288086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310652
Isoform_166887_4	chr7	-	1805	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	-35	-8	-35	-1	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATCTGAGTATGGTAG	NA	False	NA	NA	False	NA	NA	NA	133311045	133288085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
Isoform_166888_4	chr7	-	1761	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	223	-222	-1	100	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAAACATAACTGCAG	NA	False	NA	NA	False	AATACA	-20	NA	133310787	133287871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
Isoform_166889_16	chr7	-	2216	10	NIC	ENSMUSG00000030979.14	novel	1644	10	NA	NA	-373	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	18.4477908610847	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCTGAGTATGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	133312174	133288083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133311457
Isoform_166899_45	chr7	-	2883	12	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	105.850978984921	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378505	133322670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133378330
Isoform_16690_2643	chr11	-	2775	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	-2	-7	-2	7	multi-exon	TRUE	canonical	3	320	junction_5	13.7462722219517	2643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATGTTGTATCTGAGAG	NA	False	NA	-4	True	AATAAA	-22	NA	101357058	101349563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
Isoform_166903_109	chr7	-	2868	11	ISM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	241	-4	-199	0	intron_retention	FALSE	canonical	3	326	junction_7	30.1875802276367	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133361757	133322670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128
Isoform_166911_120	chr7	-	2877	12	FSM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	125	-4	125	0	multi-exon	FALSE	canonical	3	66	junction_11	95.5958261822716	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133361873	133322670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749
Isoform_166914_22	chr7	-	3049	13	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	132.624993454812	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378494	133322670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749_133361882_133378330
Isoform_166917_556	chr7	-	2933	12	FSM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	22	0	22	0	multi-exon	FALSE	canonical	3	247	junction_11	48.5725154403017	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378510	133322670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
Isoform_166969_82	chr7	-	10164	14	FSM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	-103	0	-103	0	multi-exon	FALSE	canonical	3	124	junction_9	63.2390037685062	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	-18	True	AATAAA	-19	NA	135318193	135291512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
Isoform_166973_19	chr7	-	9204	13	NIC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-104	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	77.8015191939649	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGGCCTCTCTGACA	NA	False	NA	-19	True	AATAAA	-18	NA	135318194	135291513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
Isoform_166980_25	chr7	-	1263	5	FSM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	0	-564	0	1	multi-exon	FALSE	canonical	3	25	junction_1	88.1373218336024	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTCTGGCTTGGTGTG	NA	False	NA	-6	True	ATTAAA	-15	NA	137012464	136977301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_136978081_136978683_136978847_136989099_136989163_136989268_136989431_137012368
Isoform_166984_106	chr7	-	1123	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	6	-3	0	3	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	-4	True	ATTAAA	-17	NA	137012485	136977299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
Isoform_166986_14	chr7	-	1403	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	-274	-3	-274	3	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	-4	True	ATTAAA	-17	NA	137012765	136977299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
Isoform_166988_4	chr7	-	1877	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	7	-758	1	758	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGCTAGACGTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	137012484	136976544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
Isoform_166989_5	chr7	-	1159	5	NNC	ENSMUSG00000040139.15	novel	699	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	104.760142707043	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012464	136977302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_136978081_136989099_136989163_136989268_136989431_136990647_136990708_137012368
Isoform_166990_5	chr7	-	876	2	FSM	ENSMUSG00000040139.15	ENSMUST00000145881.8	895	2	21	-2	0	2	multi-exon	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTCTGGCTTGGTGTGT	NA	False	NA	-5	True	ATTAAA	-16	NA	137012464	136977300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_136978081_137012368
Isoform_166991_4	chr7	-	762	5	NNC	ENSMUSG00000040139.15	novel	699	5	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	92.2506775042872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	137012501	136977861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_136978081_136978661_136978847_136989099_136989163_136989268_136989431_137012368
Isoform_166992_6	chr7	-	1297	5	NNC	ENSMUSG00000040139.15	novel	699	5	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	92.2506775042872	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	-4	True	ATTAAA	-17	NA	137012474	136977299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_136978081_136978661_136978847_136989099_136989163_136989268_136989431_137012368
Isoform_166993_78	chr7	-	1487	2	FSM	ENSMUSG00000041775.8	ENSMUST00000075667.5	1502	2	25	-10	22	0	multi-exon	FALSE	canonical	3	55	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAACTTGTTTTGGGTTTT	NA	False	NA	38	True	NA	NA	NA	138447964	138437551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_138438760_138447685
Isoform_166994_30	chr7	-	2104	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	2	-350	2	350	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTTCTTGGTTATGAT	NA	False	NA	NA	False	NA	NA	NA	138511233	138492214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
Isoform_166996_33	chr7	-	1099	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	657	0	-657	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATATTGTGGCCTTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	138511235	138493221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
Isoform_166998_319	chr7	-	1605	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	23	128	-4	-128	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	-24	True	AATAAA	-19	NA	138511212	138492692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
Isoform_167_144	ERCC-00131	+	753	1	FSM	ERCC-00131A	DQ855003	755	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00131_+_0_800
Isoform_167003_8	chr7	-	3628	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	2	-1874	2	1874	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	138511233	138490690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
Isoform_167004_7	chr7	-	1546	5	NIC	ENSMUSG00000078566.9	novel	1756	6	NA	NA	0	-128	combination_of_known_splicesites	FALSE	canonical	2	23	junction_3	120.771219667601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	-24	True	AATAAA	-19	NA	138511235	138492692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_138493690_138496108_138496259_138496338_138496446_138500409_138500558_138511091
Isoform_167005_15	chr7	-	1912	4	FSM	ENSMUSG00000041309.18	ENSMUST00000097974.9	1907	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	11	junction_1	33.9803864996658	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTCCGCAGGCGCCTT	NA	False	NA	-9	True	AATAAA	-20	NA	139162718	139159291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139159538_139160780_139161605_139161796_139161970_139162049
Isoform_167006_5	chr7	-	3777	4	FSM	ENSMUSG00000041309.18	ENSMUST00000097974.9	1907	4	-20	-1850	-20	1850	multi-exon	FALSE	canonical	3	11	junction_1	33.9803864996658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAACTCTGCTTGCTTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	139162733	139157441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139159538_139160780_139161605_139161796_139161970_139162049
Isoform_167007_103	chr7	-	1291	3	FSM	ENSMUSG00000041309.18	ENSMUST00000106095.3	1299	3	-12	20	-5	-20	multi-exon	FALSE	canonical	3	81	junction_2	2	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTCGGAGCCGTGGCTCCC	NA	False	NA	-28	True	AATAAA	-16	NA	139162718	139161155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139161605_139161796_139161970_139162049
Isoform_167008_35	chr7	-	1330	3	FSM	ENSMUSG00000041309.18	ENSMUST00000106095.3	1299	3	-52	21	-45	-21	multi-exon	FALSE	canonical	3	81	junction_2	2	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCGGAGCCGTGGCTCC	NA	False	NA	-29	True	AATAAA	-15	NA	139162758	139161156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139161605_139161796_139161970_139162049
Isoform_167017_257	chr7	-	3035	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-77	2	-11	-2	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGCATTATTAC	NA	False	NA	NA	False	NA	NA	NA	139616256	139575910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
Isoform_167019_160	chr7	-	3078	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-77	-41	-11	0	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616256	139575867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
Isoform_167021_28	chr7	-	2920	18	NIC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	24	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_17	103.694086947232	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCTGTTGTGCATTAT	NA	False	NA	NA	False	NA	NA	NA	139616218	139575913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616082
Isoform_167022_385	chr7	-	2865	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	288	-93	9	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616294	139575867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
Isoform_167023_44	chr7	-	3147	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	6	-93	6	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616576	139575867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
Isoform_167029_12	chr7	-	3153	17	NIC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	9	-2	intron_retention	FALSE	canonical	3	194	junction_16	65.9151917239114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTGGCTCAATGATT	NA	False	NA	NA	False	NA	NA	NA	139616294	139575869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
Isoform_167039_3	chr7	-	2076	2	FSM	ENSMUSG00000025469.11	ENSMUST00000172775.4	2070	2	1	-7	1	7	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTGCCTATTGATACG	9990	False	NA	NA	False	AATAAA	-21	NA	139629000	139626279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139628054_139628698
Isoform_167040_11	chr7	-	838	2	ISM	ENSMUSG00000025468.16	ENSMUST00000211044.2	1029	6	11227	4	11227	2	3prime_fragment	FALSE	canonical	3	34	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTCGTGGTTTCTCTT	9266	False	NA	-5	True	AGTAAA	-13	NA	139650913	139649797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_139649947_139650224
Isoform_167041_15	chr7	-	672	2	ISM	ENSMUSG00000025468.16	ENSMUST00000211044.2	1029	6	11391	6	11391	0	3prime_fragment	FALSE	canonical	3	34	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGGTCGTGGTTTCTC	9430	False	NA	-7	True	AGTAAA	-11	NA	139650749	139649799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_139649947_139650224
Isoform_167043_3	chr7	-	645	6	FSM	ENSMUSG00000025466.20	ENSMUST00000148716.8	1685	6	74	966	-2	-3	multi-exon	FALSE	canonical	3	24	junction_1	178.471286205933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGAACTTGTCTTGTGGT	1580	False	NA	-7	True	NA	NA	NA	139682245	139679389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139679620_139679715_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
Isoform_167044_20	chr7	-	721	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-10	-7	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	128.971934931597	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGAACTTGTCTTG	1936	False	NA	-11	True	NA	NA	NA	139681889	139679393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681707
Isoform_167045_12	chr7	-	790	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	162.288138814887	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGAACTTGTCTTG	1581	False	NA	-11	True	NA	NA	NA	139682244	139679393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681993
Isoform_167046_53	chr7	-	627	6	FSM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	47	11	9	-7	multi-exon	FALSE	canonical	3	247	junction_5	86.8506764510214	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGAACTTGTCTTG	1518	False	NA	-11	True	NA	NA	NA	139682307	139679393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
Isoform_167048_6	chr7	-	874	6	NNC	ENSMUSG00000025466.20	novel	685	6	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	171.429752376885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGAACTTGTCTTG	1568	False	NA	-11	True	NA	NA	NA	139682257	139679393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681922
Isoform_167056_2072	chr7	-	1494	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	62	1	1	-1	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	2072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTTTTTAAC	NA	False	NA	-2	True	NA	NA	NA	139696327	139685623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
Isoform_167068_37	chr7	-	2118	7	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1613	junction_2	102.834278763887	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTTTTTAAC	NA	False	NA	-2	True	NA	NA	NA	139696328	139685623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139692460_139692848_139693047_139696219
Isoform_167072_60	chr7	-	1474	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	-14	0	-14	0	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	0	True	AATAAA	-18	NA	140367779	140357141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
Isoform_167073_88	chr7	-	1448	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	11	1	-4	-1	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTCTATATTGTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	140367754	140357142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
Isoform_167074_19	chr7	-	1386	12	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	47.3902385596844	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTCTATATTGTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	140367755	140357142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140367648
Isoform_167075_4	chr7	-	1410	12	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	48.9449007127926	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGTCTATATTGTGTG	NA	False	NA	-2	True	AATAAA	-16	NA	140367765	140357143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140360369_140360445_140360787_140360848_140361939_140362003_140367648
Isoform_167076_3	chr7	-	1200	9	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-5	-4	combination_of_known_splicesites	FALSE	canonical	3	17	junction_8	52.9526616422631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGGTCTATATTGTG	NA	False	NA	-4	True	AATAAA	-14	NA	140367755	140357145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140367648
Isoform_167078_95	chr7	-	3887	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	-36	0	10	0	multi-exon	FALSE	canonical	3	50	junction_1	4	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACATTGGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140402081	140389601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140393228_140398500_140398628_140401947
Isoform_167080_44	chr7	-	468	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	808	992	16	3	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	140436214	140434298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
Isoform_167082_5	chr7	-	2664	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	826	-1222	1	1222	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGGTCCTTGCCCTCAT	NA	False	NA	NA	False	AATAAA	-12	NA	140436196	140432084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
Isoform_167083_7	chr7	-	1505	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	-229	992	24	3	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	140437251	140434298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
Isoform_167084_5	chr7	-	2461	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	-208	15	45	-15	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGAAGTTCCGTGCCCG	NA	False	NA	-25	True	CATAAA	-16	NA	140437230	140433321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
Isoform_167085_4	chr7	-	2080	5	NIC	ENSMUSG00000025484.10	novel	769	7	NA	NA	12	-15	intron_retention	FALSE	canonical	2	2	junction_4	46.2439185190875	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGAAGTTCCGTGCCCG	NA	False	NA	-25	True	CATAAA	-16	NA	140437263	140433321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133_140436263_140436676
Isoform_167087_9	chr7	-	1578	3	ISM	ENSMUSG00000025484.10	ENSMUST00000210710.2	489	4	1291	-1389	-2	-8	3prime_fragment	FALSE	canonical	3	105	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCGTGCCCGTCTCTAT	NA	False	NA	-18	True	CATAAA	-23	NA	140436199	140433314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_140434735_140434986_140435079_140436133
Isoform_167089_29	chr7	-	1280	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	76.8188706561668	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTGTCTCTTTGGGAT	NA	False	NA	-10	True	AATAAA	-18	NA	140461736	140443578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140457965_140461675
Isoform_167090_113	chr7	-	1373	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	62.3475919520732	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATCCTGTCTCTTTGGG	NA	False	NA	-12	True	AATAAA	-16	NA	140461745	140443580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458051_140461675
Isoform_167092_99	chr7	-	1385	7	FSM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	27	4	-15	-4	multi-exon	FALSE	canonical	3	125	junction_6	42.0135560133737	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGGCATCCTGTCTC	NA	False	NA	-18	True	AATAAA	-10	NA	140461755	140443586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
Isoform_167093_11	chr7	-	1420	7	FSM	ENSMUSG00000025486.18	ENSMUST00000026559.14	1461	7	45	-4	25	0	multi-exon	FALSE	canonical	3	24	junction_6	79.4187215543875	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTGTCTCTTTGGGAT	NA	False	NA	-10	True	AATAAA	-18	NA	140462177	140443578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140462070
Isoform_167094_3830	chr7	-	645	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	10	0	10	0	multi-exon	FALSE	canonical	3	9574	junction_1	0	3830	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	False	NA	-12	True	AATAAA	-22	NA	140535890	140534749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140535087_140535582
Isoform_1671_53	chr10	-	1557	6	FSM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	-5	2	-5	-2	multi-exon	FALSE	canonical	3	87	junction_1	15.3179633110933	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGTCTGCACTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	13744729	13522799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_167101_1187	chr7	-	646	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	29	3	29	-3	multi-exon	FALSE	canonical	3	1854	junction_1	0	1187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACTGCTTTTATTC	NA	False	NA	-1	True	AATAAA	-20	NA	140590654	140589501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140589803_140590309
Isoform_167108_4	chr7	-	1844	11	NIC	ENSMUSG00000025494.9	novel	1612	10	NA	NA	-107	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	57.0807323008386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140676759	140671089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140675967_140676037_140676532
Isoform_167109_10	chr7	-	1847	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	41.7703894176098	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676769	140671087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676472
Isoform_167110_98	chr7	-	1770	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-100	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_9	19.9616917069288	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676752	140671087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
Isoform_167112_56	chr7	-	1630	10	FSM	ENSMUSG00000025494.9	ENSMUST00000209294.2	1612	10	-16	-2	-12	0	multi-exon	FALSE	canonical	3	23	junction_9	39.3474550920669	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140680471	140671087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
Isoform_167113_3	chr7	-	2158	9	NIC	ENSMUSG00000025494.9	novel	1612	10	NA	NA	-129	0	intron_retention	FALSE	canonical	3	15	junction_8	44.2491172228328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140676781	140671089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676472
Isoform_167114_42	chr7	-	2088	9	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-117	0	intron_retention	FALSE	canonical	3	90	junction_8	21.1527185014125	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676769	140671087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
Isoform_167116_10	chr7	-	1972	9	FSM	ENSMUSG00000025494.9	ENSMUST00000210167.2	1897	9	-77	2	-29	0	multi-exon	FALSE	canonical	3	23	junction_8	41.6921380478382	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140680514	140671089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
Isoform_167117_5	chr7	-	2446	9	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-102	1	intron_retention	TRUE	canonical	3	5	junction_8	47.4590283823847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCTTATTTCTGTCTGG	NA	False	NA	-29	True	AATAAA	-18	NA	140676754	140671086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140675231_140676532
Isoform_167120_61	chr7	-	3020	24	FSM	ENSMUSG00000054662.9	ENSMUST00000067836.9	3019	24	-14	13	-14	0	multi-exon	FALSE	canonical	3	82	junction_10	30.0592986723404	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697733	140681137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167122_5	chr7	-	2885	23	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	41.3015518088386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697703	140681137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167123_35	chr7	-	3276	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	95	junction_6	23.6339238865797	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTAGATCCAGTTTCT	NA	False	NA	-9	True	AATAAA	-27	NA	140697722	140681125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167124_5	chr7	-	3381	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	8	junction_19	46.5493828242901	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCATGATGTAGATCC	NA	False	NA	-16	True	AATAAA	-20	NA	140697733	140681132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167125_15	chr7	-	3129	23	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-26	0	intron_retention	FALSE	canonical	3	82	junction_9	28.5868619768933	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697745	140681137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167127_11	chr7	-	3379	21	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-14	0	intron_retention	FALSE	canonical	3	117	junction_16	20.2598124374339	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	-14	True	AATAAA	-22	NA	140697733	140681130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167128_3	chr7	-	3600	20	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-3	0	intron_retention	FALSE	canonical	3	117	junction_15	20.7668764597553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	-14	True	AATAAA	-22	NA	140697722	140681130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167129_3	chr7	-	3209	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	2	-3	intron_retention	FALSE	canonical	3	82	junction_8	29.2584852122611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATGTAGATCCAGTTT	NA	False	NA	-11	True	AATAAA	-25	NA	140697717	140681127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167130_4	chr7	-	3462	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-5	1	intron_retention	FALSE	canonical	3	117	junction_15	20.7048912282973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCTCATGATGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	140697724	140681136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167131_3	chr7	-	3742	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	82	junction_7	29.8370156014304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697701	140681138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_167137_142	chr7	-	1650	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	7	1	7	1	multi-exon	FALSE	canonical	3	224	junction_9	176.376561249007	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGTCCTTGTCGTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	140748595	140740239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
Isoform_167138_597	chr7	-	1572	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	520	-1	-17	1	multi-exon	FALSE	canonical	3	441	junction_9	110.454616120026	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGTCCTTGTCGTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	140748619	140740239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
Isoform_167139_84	chr7	-	1640	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	452	-1	-85	1	multi-exon	FALSE	canonical	3	441	junction_9	110.454616120026	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGTCCTTGTCGTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	140748687	140740239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
Isoform_16714_349	chr11	-	6565	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	17	-10	17	10	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGATTGGGGGCCT	NA	False	NA	-1	True	AATAAA	-25	NA	101442688	101379579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
Isoform_167141_308	chr7	-	1640	10	FSM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	17	-1	17	1	multi-exon	FALSE	canonical	3	317	junction_9	147.871899850621	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGTCCTTGTCGTTCT	8009	False	NA	NA	False	ATTAAA	-15	NA	140752753	140740239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
Isoform_167143_12	chr7	-	1157	7	NIC	ENSMUSG00000025499.19	novel	2272	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	236.49154318918	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773942	140770839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140771108_140771254_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_167145_182	chr7	-	1023	6	FSM	ENSMUSG00000025499.19	ENSMUST00000026572.11	2828	6	-16	1821	-16	0	multi-exon	FALSE	canonical	3	237	junction_1	141.994366085419	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773889	140770838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140771108_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_16715_86	chr11	-	6579	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	-7	0	-7	0	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442712	101379589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
Isoform_167150_92	chr7	-	1233	6	FSM	ENSMUSG00000025499.19	ENSMUST00000168550.8	2272	6	47	992	3	0	multi-exon	FALSE	canonical	3	72	junction_2	252.24797323269	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773870	140770838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_167154_236	chr7	-	1181	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	18	0	7	0	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773900	140770838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_16716_13	chr11	-	6649	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	-77	0	-1	0	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442782	101379589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
Isoform_167161_5	chr7	-	518	4	FSM	ENSMUSG00000038580.14	ENSMUST00000167790.3	507	4	-2	-9	0	1	multi-exon	TRUE	canonical	2	4	junction_2	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTAGCTCATGGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	140859046	140858241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140858435_140858530_140858636_140858745_140858848_140858928
Isoform_167162_5	chr7	-	5499	12	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-514	-2	intron_retention	FALSE	canonical	0	0	junction_11	38.2536121559155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	-4	True	AATAAA	-27	NA	140908117	140877094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140877530_140881512_140881600_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
Isoform_167163_15	chr7	-	2664	12	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-511	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	38.2536121559155	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTCAAGCCATTTTAT	NA	False	NA	1	True	AATAAA	-32	NA	140908114	140877089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140877530_140881512_140881600_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
Isoform_167165_3	chr7	-	3407	12	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	1384	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	32.0206544912746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	-4	True	AATAAA	-27	NA	140906022	140877094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
Isoform_167167_31	chr7	-	5459	13	NNC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-496	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	40.4298947424908	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATGTTGTCAAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	140908099	140877095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354_140905384_140905407
Isoform_167169_129	chr7	-	2646	12	FSM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	-514	3	-496	2	multi-exon	FALSE	canonical	0	0	junction_11	32.0206544912746	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATGTTGTCAAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	140908099	140877095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
Isoform_16717_14	chr11	-	6624	24	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	18	-3	intron_retention	FALSE	canonical	3	9	junction_23	93.9754824640333	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTGACAAAGAATGAC	NA	False	NA	-14	True	AATAAA	-12	NA	101442687	101379592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101441522_101441596_101442594
Isoform_167171_9	chr7	-	5416	11	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-519	2	intron_retention	FALSE	canonical	0	0	junction_10	42.7906531850123	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATGTTGTCAAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	140908122	140877095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140877530_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
Isoform_167172_8	chr7	-	2542	11	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-483	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	42.7906531850123	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGAATGTTGTCAAGCC	NA	False	NA	-6	True	AATAAA	-25	NA	140908086	140877096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_140877530_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
Isoform_167173_259	chr7	-	1468	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	41	389	-5	1	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTTGTTTT	5478	False	NA	0	True	NA	NA	NA	140994008	140988095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
Isoform_167177_16	chr7	-	2280	7	FSM	ENSMUSG00000051007.16	ENSMUST00000156353.8	2348	7	19	49	5	0	multi-exon	FALSE	canonical	3	166	junction_4	10.4721853816033	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5502	False	NA	-1	True	NA	NA	NA	140993984	140988096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140990799_140990898_140991005_140991710_140991788_140993914
Isoform_167180_6	chr7	-	2455	11	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	39.7386461772416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	475	False	NA	-25	True	AATAAA	-12	NA	141017537	141009667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014137_141014213_141014243_141017481
Isoform_167181_21	chr7	-	2540	10	FSM	ENSMUSG00000019082.19	ENSMUST00000106007.10	2546	10	4	2	4	1	multi-exon	TRUE	canonical	2	3	junction_9	39.7436228287703	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTTTAAGAGTCT	3509	False	NA	-21	True	AATAAA	-16	NA	141014503	141009663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141014443
Isoform_167182_28	chr7	-	2551	10	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-21	1	intron_retention	FALSE	canonical	3	12	junction_9	37.1154355431208	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	2737	False	NA	-25	True	AATAAA	-12	NA	141015275	141009667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141015200
Isoform_167184_147	chr7	-	2527	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	273	11	12	1	multi-exon	FALSE	canonical	3	72	junction_9	20.9708792800344	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	480	False	NA	-25	True	AATAAA	-12	NA	141017532	141009667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
Isoform_167187_5	chr7	-	2654	11	NNC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-9	1	intron_retention	TRUE	canonical	0	0	junction_10	49.7127750180977	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	497	False	NA	-25	True	AATAAA	-12	NA	141017515	141009667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141016705_141016850_141017481
Isoform_167188_5	chr7	-	2602	11	NNC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	11	1	intron_retention	FALSE	canonical	2	2	junction_10	49.3238279130888	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	479	False	NA	-25	True	AATAAA	-12	NA	141017533	141009667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141016705_141016780_141017481
Isoform_167192_3	chr7	-	3970	14	NIC	ENSMUSG00000025507.14	novel	3263	15	NA	NA	6	1	intron_retention	FALSE	canonical	2	4	junction_12	17.1032368298861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACCTTTGCAGAGATCA	NA	False	NA	-4	True	NA	NA	NA	141023899	141018028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021698_141022063_141022478_141022880
Isoform_167193_5	chr7	-	3409	15	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	0	-4	intron_retention	FALSE	canonical	3	24	junction_12	13.4416729400983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAATACCTTTGCAGA	NA	False	NA	-9	True	NA	NA	NA	141023921	141018033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
Isoform_167194_3	chr7	-	3250	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	18.7006832911409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023917	141018027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020435_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
Isoform_167195_3	chr7	-	3245	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	19.9899974987492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACCTTTGCAGAGATCA	NA	False	NA	-4	True	NA	NA	NA	141023924	141018028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141021698_141022063_141022478_141022880_141023267_141023881
Isoform_167196_3	chr7	-	3287	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	17.449609992458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023930	141018029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
Isoform_167197_12	chr7	-	3288	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	16.7668986067456	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023908	141018027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021698_141022063_141022478_141022880_141023267_141023881
Isoform_167199_4	chr7	-	3933	15	FSM	ENSMUSG00000025507.14	ENSMUST00000106005.9	2900	15	-638	-395	-1	-3	multi-exon	FALSE	canonical	3	24	junction_13	13.1049531063017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAATACCTTTGCAGAG	NA	False	NA	-8	True	NA	NA	NA	141023906	141018032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880
Isoform_16720_13	chr11	-	3236	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	16	-5	combination_of_known_splicesites	FALSE	canonical	2	7	junction_13	76.2771530776592	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTTGACAAAGAATG	NA	False	NA	-16	True	AATAAA	-10	NA	101442689	101379594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
Isoform_167202_83	chr7	-	3335	16	FSM	ENSMUSG00000025507.14	ENSMUST00000026580.12	3357	16	21	1	4	-1	multi-exon	FALSE	canonical	3	24	junction_13	13.4154140201983	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTTGCAGAGATCATT	NA	False	NA	-2	True	NA	NA	NA	141023917	141018026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
Isoform_167203_4	chr7	-	3409	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	16.9556283673986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023955	141018029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021774_141022063_141022478_141022880_141023267_141023881
Isoform_167205_3	chr7	-	3394	15	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	24	junction_12	13.8808707013851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023906	141018027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
Isoform_167206_494	chr7	-	381	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	0	1269	0	-1269	multi-exon	FALSE	canonical	3	1072	junction_1	0	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTCTAACTTCCAAGGT	8000	False	NA	-30	True	AGTAAA	-20	NA	141055045	141053041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141053318_141054940
Isoform_167208_9	chr7	-	1652	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	0	-2	0	2	multi-exon	FALSE	canonical	3	1072	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	8000	False	NA	NA	False	NA	NA	NA	141055045	141051770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141053318_141054940
Isoform_167209_10	chr7	-	439	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	-41	1252	-41	-1252	multi-exon	FALSE	canonical	3	1072	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTCCATGTCCATGTCT	7959	False	NA	-13	True	AGTAAA	-37	NA	141055086	141053024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141053318_141054940
Isoform_167211_10	chr7	-	354	2	NNC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	-222	-1257	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGGTGCTCCATGTCCA	7778	False	NA	-18	True	AGTAAA	-32	NA	141055267	141053029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_141053318_141055201
Isoform_167215_28	chr7	-	2137	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-2	2047	1	166	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGAGTTTCTGAGATT	NA	False	NA	NA	False	CATAAA	-18	NA	141119731	141075095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_167216_60	chr7	-	1982	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-2	2202	1	11	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTCACTCCTTCA	NA	False	NA	-11	True	NA	NA	NA	141119731	141075250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_167217_118	chr7	-	1351	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-2	2833	1	79	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGACAGCTGCTATGG	NA	False	NA	-5	True	AATATA	-18	NA	141119731	141075881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_167221_25	chr7	-	4184	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-2	0	1	0	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGGTGTCTGCTGCCA	NA	False	NA	NA	False	NA	NA	NA	141119731	141073048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_167224_3	chr7	-	1431	13	FSM	ENSMUSG00000025512.16	ENSMUST00000166082.8	4222	13	-43	2834	-43	77	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATGAGACAGCTGCTAT	NA	False	NA	-7	True	AATATA	-16	NA	141119813	141075883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_167225_3	chr7	-	2401	12	NIC	ENSMUSG00000025512.16	novel	4182	13	NA	NA	-4	78	intron_retention	FALSE	canonical	3	145	junction_11	23.7190860136371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGAGACAGCTGCTATG	NA	False	NA	-6	True	AATATA	-17	NA	141119721	141075882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_167229_20	chr7	-	3801	7	FSM	ENSMUSG00000025139.15	ENSMUST00000130439.3	1892	7	-103	-1806	4	0	multi-exon	FALSE	canonical	3	12	junction_6	128.120602905578	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	2773	False	NA	-5	True	AATAAA	-21	NA	141456148	141435319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141452431_141452521_141456012
Isoform_167231_610	chr7	-	3709	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	77	2	5	-2	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTTTTGTTCTTGAGT	2774	False	NA	-7	True	AATAAA	-19	NA	141456147	141435321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
Isoform_167235_10	chr7	-	3807	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	-19	0	-19	0	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	2678	False	NA	-5	True	AATAAA	-21	NA	141456243	141435319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
Isoform_167239_13	chr7	-	4842	5	NIC	ENSMUSG00000025139.15	novel	3788	6	NA	NA	-22	0	intron_retention	FALSE	canonical	3	286	junction_1	8.33666600026653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	2747	False	NA	-5	True	AATAAA	-21	NA	141456174	141435319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_141438319_141443243_141444592_141445720_141445904_141446476_141446627_141456012
Isoform_16724_5	chr11	-	2280	13	FSM	ENSMUSG00000017724.15	ENSMUST00000107176.8	2377	13	104	-7	-7	2	multi-exon	FALSE	canonical	2	8	junction_11	4.75803414120673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTTTGCTTCCATGA	NA	False	NA	1	True	AATAAA	-26	NA	101676093	101660565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665054_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342_101675454_101675933
Isoform_167241_173	chr7	-	1488	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	33	-31	13	16	multi-exon	FALSE	canonical	3	149	junction_3	10.8857705285386	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGAGTCTTCCTTGTG	NA	False	NA	-3	True	NA	NA	NA	141614769	141562255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
Isoform_167244_11	chr7	-	1454	5	FSM	ENSMUSG00000025147.8	ENSMUST00000210684.2	958	5	3	-499	2	1	multi-exon	FALSE	canonical	2	4	junction_3	69.7006994226026	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCATTTCATATTATTC	NA	False	NA	-18	True	AATAAA	-34	NA	141614799	141562270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570130_141570243_141614721
Isoform_16725_5	chr11	-	2128	12	ISM	ENSMUSG00000017724.15	ENSMUST00000017868.7	2395	13	746	1	-134	-1	3prime_fragment	TRUE	canonical	2	8	junction_11	4.66745369199761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTATTTGCTCTTTGC	29	False	NA	-7	True	AATAAA	-18	NA	101675451	101660573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342
Isoform_167260_5718	chr7	-	1961	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	161	5	-20	1	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	5718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTATTGGTGTGCTCTGT	8845	False	NA	-7	True	AATAAA	-18	NA	141941614	141929652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
Isoform_167261_434	chr7	-	2009	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	119	-1	-62	1	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGCTCTGTACTGTT	8803	False	NA	-1	True	AATAAA	-24	NA	141941656	141929646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
Isoform_16727_22	chr11	-	1862	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	31	2319	10	7	multi-exon	FALSE	canonical	3	8	junction_1	3.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCTCATTATTTGTATGT	NA	False	NA	NA	False	NA	NA	NA	101875594	101864287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101865766_101872442_101872670_101875437
Isoform_167271_44	chr7	-	1621	3	FSM	ENSMUSG00000009248.7	ENSMUST00000009392.6	1605	3	-12	-4	-12	4	multi-exon	FALSE	canonical	3	20	junction_1	4	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGTGCCTTGTACCTT	NA	False	NA	-5	True	TATAAA	-19	NA	142523013	142520561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_142521077_142521636_142522437_142522707
Isoform_167273_7	chr7	-	994	4	FSM	ENSMUSG00000059277.13	ENSMUST00000155952.8	2219	4	257	968	-12	-305	multi-exon	FALSE	canonical	2	6	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTCTATTAGTTCTG	NA	False	NA	0	True	NA	NA	NA	142607166	142587325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_142587664_142591017_142591119_142598231_142598394_142606773
Isoform_167274_3	chr7	-	1881	4	NIC	ENSMUSG00000037664.14	novel	1901	4	NA	NA	-2	-4	intron_retention	FALSE	canonical	2	5	junction_2	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATACTTGTAGTCTT	NA	False	NA	NA	False	AATAAA	-12	NA	143014735	143012082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_143012759_143012848_143012988_143013495_143014416_143014589
Isoform_167275_5	chr7	-	1843	4	FSM	ENSMUSG00000037664.14	ENSMUST00000037287.8	1901	4	50	8	-4	-8	multi-exon	FALSE	canonical	2	6	junction_2	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAATCATACTTGTAG	NA	False	NA	NA	False	AATAAA	-8	NA	143014737	143012086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143012759_143012848_143012988_143013531_143014416_143014589
Isoform_167277_25	chr7	-	736	2	FSM	ENSMUSG00000010760.6	ENSMUST00000010904.5	757	2	16	5	16	-5	multi-exon	FALSE	canonical	3	98	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACTGTGTGGTCTGTGT	NA	False	NA	-3	True	AATAAA	-22	NA	143056262	143055286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143055554_143055793
Isoform_16728_16	chr11	-	4178	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	31	3	10	-3	multi-exon	FALSE	canonical	3	8	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTCTGTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	101875594	101861971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101865766_101872442_101872670_101875437
Isoform_167291_1515	chr7	-	2281	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	-8	12	4	-3	multi-exon	FALSE	canonical	3	502	junction_2	192.287354411741	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAAACTGAGATTGGTT	NA	False	NA	-13	True	ATTAAA	-8	NA	143102837	143067327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
Isoform_167303_1224	chr7	-	2253	15	FSM	ENSMUSG00000059119.10	ENSMUST00000208190.2	2259	15	6	0	4	0	multi-exon	FALSE	canonical	3	471	junction_1	167.71624785905	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGGTTTTTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	143102837	143067319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
Isoform_16733_19	chr11	-	4072	12	FSM	ENSMUSG00000017314.13	ENSMUST00000100398.5	3577	12	12	-507	12	-2	multi-exon	TRUE	canonical	2	2	junction_2	3.33773813648833	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTCTGTTTGTCAT	686	False	NA	NA	False	ATTAAA	-15	NA	101973298	101947842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101973154
Isoform_167333_772	chr7	-	2710	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	36	476	2	0	multi-exon	TRUE	canonical	3	290	junction_21	336.211639490553	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
Isoform_167338_2677	chr7	-	2462	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	2	-2	2	1	multi-exon	TRUE	canonical	3	1234	junction_21	93.4109735380392	2677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153791	143111441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
Isoform_167339_115	chr7	-	2494	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	-30	-2	4	1	multi-exon	FALSE	canonical	3	1234	junction_21	93.4109735380392	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153823	143111441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
Isoform_16734_7	chr11	-	4086	13	FSM	ENSMUSG00000017314.13	ENSMUST00000017458.11	4089	13	1	2	1	-2	multi-exon	FALSE	canonical	1	2	junction_2	3.83242742918897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTCTGTTTGTCAT	7668	False	NA	NA	False	ATTAAA	-15	NA	101979340	101947842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101976125_101976189_101979245
Isoform_16735_18	chr11	-	1605	4	NIC	ENSMUSG00000020921.7	novel	1574	4	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	131.230924539742	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTGTCTTTGCTTCTGT	4496	False	NA	-2	True	AATAAA	-14	NA	102047199	102043373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_102044421_102045382_102045530_102046549_102046731_102046969
Isoform_16736_8	chr11	-	1663	4	NIC	ENSMUSG00000020921.7	novel	1574	4	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	131.230924539742	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4440	False	NA	0	True	AATAAA	-16	NA	102047255	102043371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_102044421_102045382_102045530_102046549_102046731_102046969
Isoform_16737_306	chr11	-	1552	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	22	0	22	0	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4487	False	NA	0	True	AATAAA	-16	NA	102047208	102043371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
Isoform_167375_9	chr7	-	4213	7	FSM	ENSMUSG00000010751.16	ENSMUST00000146692.8	2298	7	7	-1922	-2	3	multi-exon	FALSE	canonical	3	15	junction_2	62.0232931154811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGAATTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	143203391	143188539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143192174_143192981_143193027_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
Isoform_167378_6	chr7	-	964	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	5	3201	-4	1249	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGGAGACCTCAAAGCC	NA	False	NA	NA	False	NA	NA	NA	143203393	143191745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
Isoform_167379_99	chr7	-	4147	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	27	-4	18	2	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTTGAATTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	143203371	143188540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
Isoform_167383_3	chr7	-	3775	22	NIC	ENSMUSG00000037606.19	novel	3775	22	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	1.88441513689613	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTTTTGGGGGAATC	NA	False	NA	NA	False	AATAAA	-14	NA	143310745	143242499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744_143262949_143263275_143263378_143263509_143263591_143267232_143267316_143269402_143269560_143310672
Isoform_167384_121	chr7	-	2375	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	12	254	-11	12	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGTATTTTATTATTA	NA	False	NA	-4	True	TATAAA	-16	NA	143376566	143349574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
Isoform_167385_65	chr7	-	2626	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	12	3	-11	-3	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCTTATTGATGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	143376566	143349323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
Isoform_167389_3	chr7	-	2675	22	NNC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	19.6798641294648	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACAAAATAAGCTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	143376571	143349330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374459_143374511_143374908_143374970_143376395
Isoform_167409_3094	chr7	-	3018	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	269	-1	5	-1	multi-exon	TRUE	canonical	0	0	junction_7	258.149054338875	3094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTGATCTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	144024477	143989470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
Isoform_167415_631	chr7	-	2906	17	FSM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	5	2	5	0	multi-exon	FALSE	canonical	3	340	junction_7	190.956545694956	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024477	143989471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
Isoform_167422_14	chr7	-	5037	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	28	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_6	46.4953941108727	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107438	144030494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038765_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
Isoform_167431_239	chr7	-	5028	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	27	2	combination_of_known_junctions	FALSE	canonical	2	132	junction_22	23.3465570993897	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGTTAAGAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	144107439	144030500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
Isoform_167433_22	chr7	-	5095	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	132	junction_22	23.3465570993897	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107500	144030494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
Isoform_167439_6	chr7	-	4718	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	11	-115	combination_of_known_splicesites	FALSE	canonical	2	12	junction_7	44.5041265946274	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTGTCTTACATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	144107455	144030829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038949_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
Isoform_16744_911	chr11	-	2217	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	39	0	0	0	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6395	False	NA	-1	True	AATAAA	-23	NA	102076083	102053322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
Isoform_167441_6	chr7	-	5021	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	44.9229616700313	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107497	144030494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_144031727_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
Isoform_167446_65	chr7	-	1506	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	22	2375	22	-2375	multi-exon	FALSE	canonical	3	26	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTGGGTGTGATA	NA	False	NA	-6	True	AATAAA	-20	NA	144136178	144133429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_144134598_144135840
Isoform_167447_3	chr7	-	2911	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	-15	1007	-15	-1007	multi-exon	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGTGACTCTCCTTGC	NA	False	NA	-9	True	AATAAA	-22	NA	144136215	144132061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_144134598_144135840
Isoform_167448_5	chr7	-	4554	26	NIC	ENSMUSG00000031075.20	novel	4552	26	NA	NA	-12	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	8.0544149384049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGTCTCTCCTGGCTG	NA	False	NA	NA	False	AATAAA	-13	NA	144232634	144142286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144173211_144173224_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144202311_144202378_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
Isoform_16745_457	chr11	-	2246	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	10	0	10	0	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6366	False	NA	-1	True	AATAAA	-23	NA	102076112	102053322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
Isoform_167450_6	chr7	-	4438	25	ISM	ENSMUSG00000031075.20	ENSMUST00000121758.8	4552	26	59695	2	37	-2	3prime_fragment	FALSE	canonical	0	0	junction_12	7.1820329449413	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGGTCTCTCCTGGCT	NA	False	NA	NA	False	AATAAA	-12	NA	144232585	144142287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144173211_144173224_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
Isoform_167452_3	chr7	-	4603	26	NIC	ENSMUSG00000031075.20	novel	4552	26	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	7.88984157001901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGTCTCTCCTGGCTG	NA	False	NA	NA	False	AATAAA	-13	NA	144292329	144142286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144173211_144173224_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292096
Isoform_167453_7	chr7	-	4598	26	FSM	ENSMUSG00000031075.20	ENSMUST00000121758.8	4552	26	-48	2	1	-2	multi-exon	FALSE	canonical	0	0	junction_12	7.88984157001901	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGGTCTCTCCTGGCT	NA	False	NA	NA	False	AATAAA	-12	NA	144292328	144142287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144173211_144173224_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292099
Isoform_167454_3	chr7	-	4546	25	NIC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	7.42637473244292	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGGTCTCTCCTGGCT	NA	False	NA	NA	False	AATAAA	-12	NA	144232639	144142287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144202311_144202378_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
Isoform_167456_251	chr7	-	3702	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	38	0	38	0	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493568	144483667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
Isoform_167459_101	chr7	-	3786	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	-47	1	9	-1	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCACTGTTGTCTGTGTT	NA	False	NA	-5	True	AATAAA	-15	NA	144493653	144483668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
Isoform_167487_23	chr7	-	2801	25	FSM	ENSMUSG00000048677.10	ENSMUST00000058022.6	2993	25	57	135	-23	0	multi-exon	FALSE	canonical	3	14	junction_4	4.91860837364933	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCTCTTTCTACTTC	NA	False	NA	1	True	TATAAA	-18	NA	144837691	144807794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
Isoform_167490_145	chr7	-	734	5	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_1	2197.68361007676	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGTATTTTTCTCAAT	6398	False	NA	-17	True	AATAAA	-10	NA	121701069	121690059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_121690291_121690808_121690909_121692839_121692928_121695831_121695955_121700877
Isoform_167504_9	chr7	-	1370	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	0	2507	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	126.089254102005	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATATAAATATCAAGAATA	NA	False	NA	NA	False	NA	NA	NA	81439213	81429422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439102
Isoform_167507_7	chr7	-	2232	3	Intergenic	novelGene_9881	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGTTGTCTAATAGTC	NA	False	NA	NA	False	NA	NA	NA	26410561	26390580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_26392411_26392894_26393053_26410317
Isoform_167508_17	chr7	-	4345	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	72.2787812723916	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-12	True	AATAAA	-16	NA	42516669	42466250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42470287_42471782_42471844_42472041_42472168_42516547
Isoform_167509_17	chr7	-	1229	2	Intergenic	novelGene_10170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTATCTGCATTAATCA	NA	False	NA	NA	False	AATAAA	-25	NA	81814508	81761688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_81762785_81814375
Isoform_167511_3	chr7	-	1445	2	Intergenic	novelGene_10169	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTTAATTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	81814540	81761504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_81762785_81814375
Isoform_167513_18	chr7	-	3488	24	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	2731	7	NA	NA	-6	657	multi-exon	FALSE	canonical	2	11	junction_1	66.4640841368572	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4661995	4633836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_4634236_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
Isoform_167514_20	chr7	-	1999	11	Fusion	ENSMUSG00000030491.17_ENSMUSG00000100068.2	novel	769	6	NA	NA	-22	105	multi-exon	FALSE	canonical	3	19	junction_1	140.882362274346	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAAGTTGCTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	35237140	35196774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_-_35197571_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
Isoform_167519_3	chr7	-	726	4	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGCCAAAAATATACT	NA	False	NA	NA	False	NA	NA	NA	79048106	79046181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_79046493_79047177_79047262_79047383_79047501_79047892
Isoform_167520_5	chr7	-	5128	11	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	-496	0	intron_retention	FALSE	canonical	0	0	junction_10	42.9842994592212	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTTTGGACTTTT	NA	False	NA	-28	True	GATAAA	-16	NA	140908099	140890205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_140890375_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
Isoform_167521_3	chr7	-	4262	12	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	153	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	48.0877297453947	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTTTGGACTTTT	NA	False	NA	-28	True	GATAAA	-16	NA	140907253	140890205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_140890375_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354_140905384_140905403
Isoform_167524_5	chr7	-	3363	2	Intergenic	novelGene_10315	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTCTTGGTGACTGTG	NA	False	NA	NA	False	NA	NA	NA	118622945	118608192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_118611350_118622739
Isoform_167525_10	chr7	-	751	2	Intergenic	novelGene_10316	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGCCTTCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	118622950	118610809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_118611350_118622739
Isoform_167527_5	chr7	-	4335	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	79.8262000988536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-12	True	AATAAA	-16	NA	42516663	42466250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42470283_42471782_42471844_42472041_42472168_42516547
Isoform_167529_4	chr7	-	2847	3	NNC	ENSMUSG00000037029.9	novel	585	3	NA	NA	4	780	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	5.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATCCTTCTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	29869148	29859913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29862649_29862751_29862799_29869083
Isoform_167530_7	chr7	-	2795	2	NNC	ENSMUSG00000037029.9	novel	2029	2	NA	NA	6	777	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATTCTTAAATCCTTCT	NA	False	NA	-4	True	ATTAAA	-14	NA	29869146	29859916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29862649_29869083
Isoform_167532_3	chr7	-	727	2	Intergenic	novelGene_10254	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAGTGTTATCATCCTG	NA	False	NA	NA	False	TTTAAA	-17	NA	106838198	106836769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_106837208_106837909
Isoform_167533_6	chr7	-	495	2	Intergenic	novelGene_10255	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTGTTTTTTCTGTTT	NA	False	NA	NA	False	GATAAA	-6	NA	106838192	106836995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_106837208_106837909
Isoform_167534_4	chr7	-	3667	27	NNC	ENSMUSG00000030592.19	novel	1028	7	NA	NA	-7772	5997	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.63454519839134	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGTTGTATTTTGTTTT	2083	False	NA	NA	False	AATATA	-16	NA	28779274	28762426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_28762806_28763853_28764093_28764241_28764303_28765000_28765051_28765919_28766042_28766132_28766201_28767025_28767142_28767460_28767585_28767840_28767917_28767994_28768070_28768423_28768565_28768984_28769075_28769256_28769336_28769444_28769609_28769980_28770122_28770993_28771085_28771180_28771402_28772189_28772360_28772443_28772565_28774020_28774130_28774215_28774403_28774588_28774725_28775594_28775690_28776225_28776359_28776447_28776563_28777943_28778218_28779184
Isoform_167536_5	chr7	-	1068	2	Intergenic	novelGene_9904	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTGCCCTGACAATAA	7871	False	NA	NA	False	NA	NA	NA	27388721	27387550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27388097_27388199
Isoform_167537_3	chr7	-	614	2	Intergenic	novelGene_10439	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTTGCCTGAATGTAT	NA	False	NA	NA	False	NA	NA	NA	140640773	140638366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_140638918_140640710
Isoform_167539_3	chr7	-	1198	10	NNC	ENSMUSG00000048065.9	novel	2772	9	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.4113781667882	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAAATCGGTGGACTCA	NA	False	NA	NA	False	AATAAA	-13	NA	107357260	107347660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_107347963_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356818_107356912_107357164
Isoform_167540_6	chr7	-	974	7	NNC	ENSMUSG00000030780.16	novel	464	3	NA	NA	26	3521	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	59.0124751406194	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTAGATACCCTTGGGCA	1132	False	NA	NA	False	AATAAA	-21	NA	127897316	127883615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_127883833_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
Isoform_167541_3	chr7	-	1844	6	NNC	ENSMUSG00000030583.17	novel	6385	5	NA	NA	-36	3176	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	20.9093280618962	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTTGGTTTGGCCTGTCT	985	False	NA	NA	False	NA	NA	NA	29041329	29027352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_29027650_29027727_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29041243
Isoform_167543_3	chr7	-	1551	2	Intergenic	novelGene_10207	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGGCCTCCATGCCCT	NA	False	NA	NA	False	NA	NA	NA	98521661	98518512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_98519811_98521408
Isoform_167546_4	chr7	-	1417	10	NNC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	95.2727079959885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGGAGTCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	126817625	126813618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_126814069_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
Isoform_167548_4	chr7	-	1717	3	NNC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	4	-134989	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTTGTATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	110214117	110197071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_110198489_110198802_110198899_110213913
Isoform_167558_225	chr7	+	2771	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	30	1226	30	-106	multi-exon	FALSE	canonical	3	270	junction_1	341	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTTTAATTTTCT	301	False	NA	15	True	NA	NA	NA	3339129	3347732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3339318_3341727_3341816_3345237
Isoform_167559_249	chr7	+	2876	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	30	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	400.600660120386	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGACTCATGCTTTCTTT	301	False	NA	16	True	AATATA	-10	NA	3339129	3347867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_3339318_3341727_3341816_3345237_3346670_3346699
Isoform_167560_16	chr7	+	2979	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	-39	1087	2	6	multi-exon	FALSE	canonical	3	270	junction_1	341	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCATGCTTTCTTTCTCT	232	False	NA	20	True	AATATA	-14	NA	3339060	3347871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3339318_3341727_3341816_3345237
Isoform_167561_20	chr7	+	2779	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	-14	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	400.600660120386	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATTTTAA	257	False	NA	9	True	NA	NA	NA	3339085	3347726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_3339318_3341727_3341816_3345237_3346670_3346699
Isoform_167564_85	chr7	+	2865	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	-43	-24	-43	-3	multi-exon	FALSE	canonical	3	952	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGGAAGACTCATGCTT	2747	False	NA	11	True	AATATA	-5	NA	3341575	3347862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3341816_3345237
Isoform_167572_16	chr7	+	3090	18	FSM	ENSMUSG00000078816.11	ENSMUST00000100301.11	3127	18	33	4	33	-4	multi-exon	TRUE	canonical	3	18	junction_10	8.64845927034781	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGGATGTTTTCT	NA	False	NA	7	True	AATAAA	-18	NA	3352070	3379611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
Isoform_167573_12	chr7	+	2827	17	FSM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	19	-727	19	-5	multi-exon	FALSE	canonical	3	19	junction_9	8.11802585300146	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTGGATGTTTTC	NA	False	NA	6	True	AATAAA	-17	NA	3352179	3379610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
Isoform_167577_27	chr7	+	2535	4	FSM	ENSMUSG00000078815.9	ENSMUST00000183200.8	1977	4	-558	0	-558	0	multi-exon	FALSE	canonical	3	12	junction_3	6.16441400296898	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472152	3484183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3473509_3478953_3479029_3480334_3480473_3483217
Isoform_167578_12	chr7	+	2650	4	FSM	ENSMUSG00000078815.9	ENSMUST00000183200.8	1977	4	-673	0	-673	0	multi-exon	FALSE	canonical	3	12	junction_3	6.16441400296898	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472037	3484183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3473509_3478953_3479029_3480334_3480473_3483217
Isoform_167579_28	chr7	+	2715	5	NNC	ENSMUSG00000078815.9	novel	1977	4	NA	NA	-603	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	7.79422863405995	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472107	3484183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_3473509_3478953_3479029_3480334_3480473_3481159_3481295_3483217
Isoform_167580_19	chr7	+	2451	3	FSM	ENSMUSG00000078815.9	ENSMUST00000108647.3	868	3	-1079	-504	-612	0	multi-exon	FALSE	canonical	2	4	junction_2	11.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472098	3484183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3473509_3478953_3479029_3483217
Isoform_167584_1078	chr7	+	340	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	10	165	-2	-1	multi-exon	FALSE	canonical	3	2080	junction_1	661.918591839074	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTCTTTCGTGGGT	265	False	NA	21	True	AATAAA	-23	NA	3620381	3623161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
Isoform_167587_28	chr7	+	350	4	FSM	ENSMUSG00000035674.14	ENSMUST00000148403.2	343	4	-8	1	-2	-1	multi-exon	FALSE	canonical	3	46	junction_1	1620.57650921585	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTCTTTCGTGGGT	265	False	NA	21	True	AATAAA	-23	NA	3620381	3623161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3620417_3620615_3620691_3622428_3622507_3622999
Isoform_167590_22	chr7	+	843	3	FSM	ENSMUSG00000008373.17	ENSMUST00000143231.2	827	3	17	-33	17	33	multi-exon	FALSE	canonical	3	674	junction_1	159.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGATGTGTTTTCTAA	2957	False	NA	NA	False	AATAAA	-18	NA	3633007	3634453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3633056_3633556_3633742_3633843
Isoform_167592_1593	chr7	+	1849	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	37	1258	30	-1	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGGGTGTGAGTGATTA	2970	False	NA	13	True	ATTAAA	-21	NA	3633020	3644227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
Isoform_167593_53	chr7	+	3103	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	38	3	31	-2	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATGAGTTCAATACTT	2971	False	NA	NA	False	AATAAA	-18	NA	3633021	3645482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
Isoform_1676_4	chr10	-	1592	6	FSM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	-40	2	-40	-2	multi-exon	FALSE	canonical	3	87	junction_1	15.3179633110933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGTCTGCACTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	13744764	13522799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_167606_26	chr7	+	1950	14	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	241.003081322834	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2999	False	NA	12	True	ATTAAA	-20	NA	3633049	3644226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_3633187_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
Isoform_167621_227	chr7	+	2872	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	215.895415536845	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
Isoform_167625_1084	chr7	+	2869	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-57	10	5	-1	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
Isoform_167626_302	chr7	+	2922	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-100	0	-16	0	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2712	False	NA	NA	False	AATAAA	-23	NA	3648250	3664108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
Isoform_167637_30	chr7	+	2885	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	291.16989891574	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2754	False	NA	NA	False	AATAAA	-14	NA	3648292	3664099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
Isoform_167638_163	chr7	+	2881	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	220.255859396784	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2755	False	NA	NA	False	AATAAA	-14	NA	3648293	3664099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
Isoform_167651_24	chr7	+	1500	5	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	477.15458710988	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2024	False	NA	2	True	AATAAA	-12	NA	3696612	3704007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_167652_39	chr7	+	1369	5	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	-18	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	477.15458710988	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2155	False	NA	2	True	AATAAA	-12	NA	3696743	3704007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_167656_181	chr7	+	1393	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	370	16	-18	4	multi-exon	FALSE	canonical	3	289	junction_1	380.27448967818	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2155	False	NA	2	True	AATAAA	-12	NA	3696743	3704007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_167657_52	chr7	+	1505	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	258	16	31	4	multi-exon	FALSE	canonical	3	289	junction_1	380.27448967818	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2043	False	NA	2	True	AATAAA	-12	NA	3696631	3704007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_167658_50	chr7	+	1398	5	NIC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	80	4	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	468.595241119668	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2319	False	NA	2	True	AATAAA	-12	NA	3696907	3704007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_3697058_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_167660_36	chr7	+	1318	5	NIC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	47	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	477.15458710988	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2755	False	NA	2	True	AATAAA	-12	NA	3697343	3704007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_3697414_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_167663_19	chr7	+	1418	5	ISM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	785	-120	25	3	3prime_fragment	FALSE	canonical	3	59	junction_4	570.385998688607	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGTATTTTGAGTC	2958	False	NA	1	True	AATAAA	-11	NA	3697546	3704006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
Isoform_167667_534	chr7	+	1257	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	66	-4	66	4	multi-exon	FALSE	canonical	3	1035	junction_3	83.107694522763	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2999	False	NA	2	True	AATAAA	-12	NA	3697587	3704007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_167681_207	chr7	+	884	6	NIC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	206	junction_4	6461.44068764854	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	1309	False	NA	7	True	AATAAA	-22	NA	3707036	3709900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
Isoform_167682_10871	chr7	+	706	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	45	0	0	0	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	10871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1309	False	NA	3	True	AATAAA	-18	NA	3707036	3709896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
Isoform_167684_207	chr7	+	752	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	-2	1	-2	1	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGGTGTGCCTCTGT	1262	False	NA	2	True	AATAAA	-17	NA	3706989	3709895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
Isoform_16770_27	chr11	-	3873	28	FSM	ENSMUSG00000008855.18	ENSMUST00000124077.8	3872	28	0	-1	0	-1	multi-exon	TRUE	canonical	1	1	junction_25	66.6396241448948	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102120965	102086573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102104750_102104863_102109241_102109314_102115559_102115782_102120830
Isoform_167705_7	chr7	+	1927	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	-40	2468	-37	1	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGCTAGGTCCTTCTT	253	False	NA	4	True	AATAAA	-19	NA	4122491	4137239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
Isoform_167706_43	chr7	+	1875	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	14	2466	-9	3	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTAGGTCCTTCTTAT	307	False	NA	6	True	AATAAA	-21	NA	4122545	4137241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
Isoform_167707_19	chr7	+	2981	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	14	1360	-9	1	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGAGAGGATAAAAACTG	307	False	NA	NA	False	NA	NA	NA	4122545	4138347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
Isoform_167708_3	chr7	+	3034	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	-42	1363	-39	-2	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGTGAGAGGATAAAAA	251	False	NA	NA	False	NA	NA	NA	4122489	4138344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
Isoform_167709_26	chr7	+	2499	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	10	3	7	-3	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACATGTGAGAGGATAAAA	300	False	NA	NA	False	NA	NA	NA	4122538	4138343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
Isoform_167711_4	chr7	+	3401	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	-27	-862	-27	-499	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGGAAGAAACCTACCAA	263	False	NA	NA	False	NA	NA	NA	4122501	4139208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
Isoform_167715_3	chr7	+	2327	11	ISM	ENSMUSG00000030428.17	ENSMUST00000134536.8	2649	13	3024	53	-494	7	3prime_fragment	FALSE	canonical	3	26	junction_10	14.1509716980849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGATAAAAACTGCATCTC	5933	False	NA	NA	False	NA	NA	NA	4128171	4138353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
Isoform_167719_23	chr7	+	3641	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	117.390224651587	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	105	False	NA	14	True	ATTAAA	-14	NA	4140060	4151170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
Isoform_167720_43	chr7	+	5057	15	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	2	-1	intron_retention	FALSE	canonical	3	127	junction_1	77.0351099386851	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	105	False	NA	14	True	ATTAAA	-14	NA	4140060	4151170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
Isoform_167721_114	chr7	+	3614	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	127	junction_1	83.8505548911607	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	81	False	NA	14	True	ATTAAA	-14	NA	4140036	4151170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
Isoform_167722_35	chr7	+	5463	14	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	127	junction_1	73.1737819636508	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	81	False	NA	15	True	ATTAAA	-15	NA	4140036	4151171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
Isoform_167724_28	chr7	+	5138	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	40	junction_8	108.760082546657	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	105	False	NA	15	True	ATTAAA	-15	NA	4140060	4151171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
Isoform_167725_41	chr7	+	3671	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	110.212560961762	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	105	False	NA	15	True	ATTAAA	-15	NA	4140060	4151171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
Isoform_167726_84	chr7	+	5087	15	FSM	ENSMUSG00000035545.14	ENSMUST00000037472.13	5105	15	13	5	2	0	multi-exon	FALSE	canonical	3	216	junction_8	58.4889663412978	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	105	False	NA	15	True	ATTAAA	-15	NA	4140060	4151171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
Isoform_167727_227	chr7	+	3619	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	173	junction_15	69.6971225294767	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	105	False	NA	14	True	ATTAAA	-14	NA	4140060	4151170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
Isoform_167728_43	chr7	+	5467	14	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	2	-1	intron_retention	FALSE	canonical	3	249	junction_1	49.7978160686501	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	105	False	NA	14	True	ATTAAA	-14	NA	4140060	4151170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
Isoform_167731_11	chr7	+	3525	15	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	108.968657729399	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	89	False	NA	15	True	ATTAAA	-15	NA	4140044	4151171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
Isoform_16774_662	chr11	-	3758	27	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	78	junction_13	40.333300731889	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAACGTGTGCCGTGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	102120965	102086576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
Isoform_16775_17	chr11	-	3866	27	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	-78	-1	combination_of_known_junctions	FALSE	canonical	1	78	junction_13	40.333300731889	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102121070	102086573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
Isoform_167750_3	chr7	+	1353	6	ISM	ENSMUSG00000035390.17	ENSMUST00000048248.9	2996	19	16330	2	-1720	-2	3prime_fragment	TRUE	canonical	3	7	junction_3	4.35430821141545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGGCTGGCCTTTGC	NA	False	NA	2	True	NA	NA	NA	4710256	4718994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_4710485_4710896_4710946_4711047_4711172_4711816_4712016_4713420_4713511_4718331
Isoform_167751_74	chr7	+	2148	9	FSM	ENSMUSG00000059851.16	ENSMUST00000098853.9	2189	9	41	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	214.33585648463	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4743181_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_167754_18	chr7	+	2332	8	ISM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-40	0	-8	0	intron_retention	FALSE	canonical	3	456	junction_1	89.2823999384846	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	613	False	NA	16	True	ATTAAA	-17	NA	4743143	4750513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075
Isoform_167755_1097	chr7	+	2193	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-17	1	1	-1	multi-exon	FALSE	canonical	3	456	junction_1	88.3026578025826	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	636	False	NA	15	True	ATTAAA	-16	NA	4743166	4750512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_167756_34	chr7	+	2275	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-99	1	-29	-1	multi-exon	FALSE	canonical	3	456	junction_1	88.3026578025826	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	554	False	NA	15	True	ATTAAA	-16	NA	4743084	4750512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_167757_34	chr7	+	2298	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	226.026789064925	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	625	False	NA	16	True	ATTAAA	-17	NA	4743155	4750513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748707_4748938_4749075_4749261_4749375
Isoform_16776_17	chr11	-	4015	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_26	54.5129185058337	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120985	102086574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120595
Isoform_167760_118	chr7	+	2536	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	456	junction_1	90.2970155675599	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	625	False	NA	16	True	ATTAAA	-17	NA	4743155	4750513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_167765_94	chr7	+	2772	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108582.10	2774	9	1	1	1	-1	multi-exon	FALSE	canonical	3	73	junction_1	203.174647778703	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	636	False	NA	15	True	ATTAAA	-16	NA	4743166	4750512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4743818_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_167768_118	chr7	+	3731	8	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	570	junction_2	59.1256013474187	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	638	False	NA	15	True	ATTAAA	-16	NA	4743168	4750512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_167771_80	chr7	+	4075	7	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	599	junction_4	48.5297732210742	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	625	False	NA	15	True	ATTAAA	-16	NA	4743155	4750512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_167778_2335	chr7	+	509	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	90	507	-26	-3	multi-exon	FALSE	canonical	3	3938	junction_1	1160.31525888441	2335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTGTGCTCATTGA	2783	False	NA	14	True	AATAAA	-29	NA	4795962	4797558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
Isoform_16778_275	chr11	-	3764	27	FSM	ENSMUSG00000008855.18	ENSMUST00000107152.9	3788	27	27	-3	0	-1	multi-exon	FALSE	canonical	1	50	junction_25	47.7576630363989	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102120965	102086573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
Isoform_167783_891	chr7	+	830	4	FSM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	-25	-33	-25	-3	multi-exon	FALSE	canonical	3	6459	junction_1	109.515092820832	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTGTGCTCATTGA	2784	False	NA	14	True	AATAAA	-29	NA	4795963	4797558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416
Isoform_167793_39	chr7	+	3533	3	FSM	ENSMUSG00000074406.6	ENSMUST00000116354.4	3523	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	14	junction_2	2	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTTTTGTTTTCATG	2961	False	NA	8	True	AATAAA	-14	NA	4918205	4925001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_4918405_4920408_4920516_4921774
Isoform_167795_42	chr7	+	1123	2	FSM	ENSMUSG00000051184.8	ENSMUST00000086349.5	1142	2	20	-1	20	0	multi-exon	FALSE	canonical	3	22	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGTGTGTTCAGTCA	2960	False	NA	6	True	AATAAA	-16	NA	5018488	5021487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_5018560_5020435
Isoform_167796_6	chr7	+	3945	2	ISM	ENSMUSG00000074405.9	ENSMUST00000085427.6	2751	3	-171	460	23	-108	5prime_fragment	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGGGGTCTGTCCTTGC	2777	False	NA	5	True	AATAAA	-15	NA	5023397	5035677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_5023655_5031989
Isoform_167797_16	chr7	+	3773	2	ISM	ENSMUSG00000074405.9	ENSMUST00000085427.6	2751	3	0	461	0	-109	5prime_fragment	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCTGGGGTCTGTCCTTG	2948	False	NA	4	True	AATAAA	-14	NA	5023568	5035676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_5023655_5031989
Isoform_167798_56	chr7	+	1071	2	FSM	ENSMUSG00000055633.7	ENSMUST00000069324.7	1096	2	25	0	25	0	multi-exon	FALSE	canonical	3	32	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGTTCTTACTTGCA	2944	False	NA	4	True	AATAAA	-15	NA	5054561	5056722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_5054714_5055803
Isoform_1678_4	chr10	-	1392	5	FSM	ENSMUSG00000019806.14	ENSMUST00000105534.10	617	5	-163	-612	-5	-3	multi-exon	FALSE	canonical	2	6	junction_1	50.8742321809381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGTCTGCACTGT	NA	False	NA	-3	True	AATAAA	-14	NA	13744729	13522800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13523451_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_167801_3298	chr7	+	2128	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	49	6	49	0	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	3298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	121	False	NA	27	True	ATTAAA	-17	NA	5065190	5082931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
Isoform_167803_69	chr7	+	2637	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	-454	0	-454	0	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCTCATCTGTGTCCA	2426	False	NA	33	True	ATTAAA	-23	NA	5064687	5082937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
Isoform_167807_479	chr7	+	2136	12	FSM	ENSMUSG00000030435.17	ENSMUST00000209099.2	2088	12	-49	1	-49	0	multi-exon	FALSE	canonical	0	0	junction_10	525.567461915969	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	125	False	NA	27	True	ATTAAA	-17	NA	5065194	5082931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
Isoform_16782_111	chr11	-	3689	26	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	22	junction_24	52.2038466015676	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102120965	102086573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102115559_102115782_102120830
Isoform_167837_154	chr7	+	2576	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	31.3495356971958	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGCTCCCTTAAATT	1299	False	NA	20	True	AATAAA	-14	NA	5083224	5101176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_167840_191	chr7	+	2574	12	FSM	ENSMUSG00000035203.17	ENSMUST00000098845.10	2565	12	-9	0	-9	0	multi-exon	FALSE	canonical	3	82	junction_1	31.9772646507711	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_167842_8	chr7	+	2609	12	FSM	ENSMUSG00000035203.17	ENSMUST00000098845.10	2565	12	-44	0	-44	0	multi-exon	TRUE	canonical	3	82	junction_1	31.9772646507711	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1264	False	NA	21	True	AATAAA	-15	NA	5083189	5101177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_167845_51	chr7	+	2510	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	43.1135345280822	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5083477_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_167847_50	chr7	+	2507	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	43.5085248605051	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5083477_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_167849_29	chr7	+	2471	11	NIC	ENSMUSG00000035203.17	novel	2334	11	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	43.976812071818	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGGCTCCCTTAAAT	1299	False	NA	19	True	AATAAA	-13	NA	5083224	5101175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5083477_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_167851_23	chr7	+	2470	11	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	44.445584707595	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5083477_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_167852_7	chr7	+	2394	11	NIC	ENSMUSG00000035203.17	novel	2334	11	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	46.5119339524815	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGCTCCCTTAAATT	1310	False	NA	20	True	AATAAA	-14	NA	5083235	5101176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5083477_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_167854_23	chr7	+	2402	11	FSM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	-67	-1	-9	1	multi-exon	FALSE	canonical	3	8	junction_1	46.9447547655753	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGCTCCCTTAAATT	1299	False	NA	20	True	AATAAA	-14	NA	5083224	5101176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_5083477_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_167855_26	chr7	+	2715	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	45.4569090294577	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1322	False	NA	21	True	AATAAA	-15	NA	5083247	5101177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5083638_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_167856_16	chr7	+	2735	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	45.8262979824561	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTCCCTTAAATTCT	1300	False	NA	22	True	AATAAA	-16	NA	5083225	5101178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5083638_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_167858_13	chr7	+	2645	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	53.7554917432813	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1322	False	NA	21	True	AATAAA	-15	NA	5083247	5101177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5083638_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_16786_32	chr11	-	3873	26	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	8	-1	intron_retention	FALSE	canonical	1	78	junction_13	41.1161087653002	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102120984	102086573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
Isoform_167863_3	chr7	-	1557	2	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAATTGTAACCCAGGGG	NA	False	NA	NA	False	AAAACA	-41	NA	5096311	5092082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_5093167_5095838
Isoform_167866_3	chr7	+	2516	6	ISM	ENSMUSG00000034690.14	ENSMUST00000037728.13	3615	10	24	20368	24	16906	5prime_fragment	FALSE	canonical	2	7	junction_4	5.60713830755047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGCCAGTTGTGTGT	3001	False	NA	NA	False	AATATA	-14	NA	6048183	6087781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_6048221_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542
Isoform_167867_30	chr7	+	3603	10	FSM	ENSMUSG00000034690.14	ENSMUST00000037728.13	3615	10	11	1	11	-1	multi-exon	FALSE	canonical	2	7	junction_4	4.84067131350933	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGATGACTTCTAATTT	2988	False	NA	20	True	AATAAA	-16	NA	6048170	6108148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6048221_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6095465_6095637_6101828_6102000_6103751_6103923_6107516
Isoform_167870_16	chr7	+	2542	6	NNC	ENSMUSG00000044876.16	novel	1648	5	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	104.614721717357	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGTTCTCGTTCTTAA	2968	False	NA	NA	False	NA	NA	NA	6175512	6194349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404_6194188_6194221
Isoform_167871_192	chr7	+	1643	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	1	4	1	-4	multi-exon	FALSE	canonical	3	144	junction_2	66.2740522376593	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTCTGACTCTCCGGT	2968	False	NA	11	True	AATAAA	-20	NA	6175512	6193416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404
Isoform_167874_9	chr7	+	2395	5	NNC	ENSMUSG00000044876.16	novel	1648	5	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	122.692705569647	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGTTCTCGTTCTTAA	2995	False	NA	NA	False	NA	NA	NA	6175539	6194349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404_6194188_6194221
Isoform_167875_114	chr7	+	1490	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	44	933	-18	-5	multi-exon	FALSE	canonical	3	89	junction_1	90.9004339312464	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGAGTCTGACTCTCCGG	3000	False	NA	10	True	AATAAA	-19	NA	6175544	6193415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
Isoform_167884_5	chr7	+	1811	6	NNC	ENSMUSG00000058028.15	novel	1980	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4.06939798987516	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTGATTGACTTATT	3055	False	NA	NA	False	ATTAAA	-22	NA	6225251	6242422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6225336_6233070_6233538_6234335_6234537_6236813_6236968_6241497_6242206_6242225
Isoform_167885_18	chr7	+	957	9	NIC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-238	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	26.4952825989835	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	2974	False	NA	8	True	AATAAA	-23	NA	6263296	6284860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_6263544_6266905_6266933_6269287_6269345_6269828_6269847_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
Isoform_167886_5	chr7	+	876	8	NIC	ENSMUSG00000053367.16	novel	684	11	NA	NA	-214	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	30.8353097362522	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	2998	False	NA	8	True	AATAAA	-23	NA	6263320	6284860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_6263544_6266905_6266933_6269828_6269847_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
Isoform_167887_63	chr7	+	3440	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	24	208	10	-7	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAAGAGGTTCTTTTAC	2996	False	NA	NA	False	AATAAA	-30	NA	6289601	6310674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
Isoform_167891_7	chr7	+	3496	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	-32	208	-32	-7	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAAGAGGTTCTTTTAC	2940	False	NA	NA	False	AATAAA	-30	NA	6289545	6310674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
Isoform_167892_9	chr7	+	3543	6	NNC	ENSMUSG00000054893.16	novel	3498	5	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	18.2822318112423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGAGGTTCTTTTACA	2995	False	NA	NA	False	AATAAA	-31	NA	6289600	6310675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6289654_6290868_6290970_6292356_6292437_6293534_6293662_6296847_6296941_6307586
Isoform_167898_4	chr7	+	2212	6	NNC	ENSMUSG00000109398.3	novel	2950	5	NA	NA	3	-900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.03492377064027	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAAAAAGCCATG	3015	False	NA	NA	False	AAGAAA	-26	NA	6346760	6358055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6346862_6349091_6349257_6349343_6349432_6351435_6351563_6352716_6352813_6356420
Isoform_167899_5	chr7	+	2134	5	FSM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	10	1739	10	62	multi-exon	FALSE	canonical	2	8	junction_1	5.71729831301464	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACTGTATTAAGTTTGG	2964	False	NA	NA	False	CATAAA	-16	NA	6366288	6382969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6366347_6374304_6374396_6376125_6376253_6378517_6378614_6381207
Isoform_1679_12	chr10	-	1207	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-29	261	-6	-261	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAGCAGACTGGTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	13744730	13528455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_167902_8	chr7	+	2693	7	FSM	ENSMUSG00000062861.9	ENSMUST00000081022.9	4447	7	48	1706	48	1080	multi-exon	FALSE	canonical	3	6	junction_3	4.21966296705739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGAGATGTGTTTAGC	3007	False	NA	NA	False	TATAAA	-19	NA	6386341	6398208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
Isoform_167903_3	chr7	+	4457	7	FSM	ENSMUSG00000062861.9	ENSMUST00000081022.9	4447	7	-14	4	-14	-4	multi-exon	FALSE	canonical	3	6	junction_3	4.21966296705739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCATGGTTTTGTGTGTG	2945	False	NA	NA	False	NA	NA	NA	6386279	6399910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
Isoform_167904_3	chr7	+	2942	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-164	-27	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	9	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTCAAAATTTTTTCA	2990	False	NA	3	True	AATAAA	-14	NA	6980080	6994059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6980472_6984231_6984357_6987994_6988143_6989101_6989202_6991881
Isoform_167905_6	chr7	+	2447	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-164	288	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	7.34846922834953	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCTATGGCACTGTGA	2990	False	NA	18	True	AATAAA	-27	NA	6980080	6993555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6980472_6984231_6984357_6987994_6988152_6989101_6989202_6991881
Isoform_167906_6	chr7	+	2952	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-165	-27	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	7.34846922834953	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTCAAAATTTTTTCA	2989	False	NA	3	True	AATAAA	-14	NA	6980079	6994059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6980472_6984231_6984357_6987994_6988152_6989101_6989202_6991881
Isoform_167910_5	chr7	+	3014	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-164	-18	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	8.7086164228309	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTTTCAGATTAAAAA	2990	False	NA	12	True	AATAAA	-23	NA	6980080	6994068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6988152_6989101_6989202_6991881
Isoform_167913_7	chr7	+	1090	7	FSM	ENSMUSG00000070837.7	ENSMUST00000086248.8	1154	7	62	2	-58	1	multi-exon	FALSE	canonical	2	17	junction_1	169.856802434678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2856	False	NA	18	True	ATTAAA	-19	NA	6998443	7006088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6998548_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_167914_26	chr7	+	1235	7	FSM	ENSMUSG00000070837.7	ENSMUST00000208049.2	1401	7	165	1	-38	-1	multi-exon	FALSE	canonical	2	56	junction_6	128.262751152988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2876	False	NA	19	True	ATTAAA	-20	NA	6998463	7006089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_167915_187	chr7	+	1208	7	FSM	ENSMUSG00000070837.7	ENSMUST00000208049.2	1401	7	192	1	-11	-1	multi-exon	FALSE	canonical	2	56	junction_6	128.262751152988	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2903	False	NA	19	True	ATTAAA	-20	NA	6998490	7006089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_167917_11	chr7	+	1262	7	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	167.377484215238	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2903	False	NA	19	True	ATTAAA	-20	NA	6998490	7006089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6998712_6999212_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_167918_28	chr7	+	1330	7	FSM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	-11	1	-11	-1	multi-exon	FALSE	canonical	2	56	junction_6	160.229696234985	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2903	False	NA	19	True	ATTAAA	-20	NA	6998490	7006089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_167919_11	chr7	+	1390	7	FSM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	-72	2	46	1	multi-exon	FALSE	canonical	2	56	junction_6	160.229696234985	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2842	False	NA	18	True	ATTAAA	-19	NA	6998429	7006088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_167920_9	chr7	+	1383	7	NNC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	170.358119527332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2903	False	NA	18	True	ATTAAA	-19	NA	6998490	7006088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_6998834_6999212_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_167921_12	chr7	+	1107	6	ISM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	645	1	479	-1	3prime_fragment	FALSE	canonical	2	56	junction_5	137.89706305792	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	3559	False	NA	19	True	ATTAAA	-20	NA	6999146	7006089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_167922_62	chr7	+	2716	4	FSM	ENSMUSG00000034538.9	ENSMUST00000051435.8	2725	4	0	9	0	-9	multi-exon	FALSE	canonical	3	16	junction_3	9.89949493661167	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATGTATTTTTAATCAA	2969	False	NA	NA	False	AATAAA	-20	NA	7174328	7186552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_7174558_7175135_7175175_7177553_7177681_7184231
Isoform_167923_4	chr7	+	2772	4	FSM	ENSMUSG00000034538.9	ENSMUST00000051435.8	2725	4	-56	9	-56	-9	multi-exon	FALSE	canonical	3	16	junction_3	9.89949493661167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATGTATTTTTAATCAA	2913	False	NA	NA	False	AATAAA	-20	NA	7174272	7186552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_7174558_7175135_7175175_7177553_7177681_7184231
Isoform_167924_7	chr7	+	1877	4	FSM	ENSMUSG00000054272.7	ENSMUST00000131379.4	2276	4	-23	422	-23	-422	multi-exon	FALSE	canonical	3	7	junction_1	11.2644968324772	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	10739648	10744052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_10739779_10740385_10740858_10742693_10742854_10742937
Isoform_167925_9	chr7	+	1954	5	NIC	ENSMUSG00000070828.11	novel	1829	4	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	11.27774356864	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTATGTTTTGTTTTGTT	NA	False	NA	NA	False	AGTAAA	-44	NA	11131843	11136242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_11131924_11132016_11132147_11132578_11133051_11134886_11135047_11135130
Isoform_167926_11	chr7	+	1830	4	FSM	ENSMUSG00000070828.11	ENSMUST00000145237.8	1829	4	2	-3	2	3	multi-exon	FALSE	canonical	3	19	junction_1	4.49691252107735	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTTGTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	11131843	11136248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_11131924_11132578_11133051_11134886_11135047_11135130
Isoform_167927_6	chr7	+	3468	4	FSM	ENSMUSG00000030386.20	ENSMUST00000123589.8	3509	4	34	7	-24	-7	multi-exon	FALSE	canonical	3	113	junction_3	4.98887651569859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACAACACTTTGTAATG	NA	False	NA	NA	False	NA	NA	NA	12212265	12217821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861
Isoform_167928_8	chr7	+	2275	4	FSM	ENSMUSG00000030386.20	ENSMUST00000123589.8	3509	4	46	1188	-12	-1188	multi-exon	FALSE	canonical	3	113	junction_3	4.98887651569859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTATTTTGCCTGCATG	NA	False	NA	NA	False	AATAAA	-19	NA	12212277	12216640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861
Isoform_167929_4	chr7	+	2188	5	ISM	ENSMUSG00000030386.20	ENSMUST00000151933.2	4069	8	-16	12849	-16	-1188	5prime_fragment	FALSE	canonical	2	4	junction_4	49.6959505392542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTATTTTGCCTGCATG	NA	False	NA	NA	False	AATAAA	-19	NA	12212273	12216640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12215044
Isoform_167931_150	chr7	+	4016	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	58	674	-12	-1	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTGGTTACCTAATTC	NA	False	NA	20	True	AATAAA	-24	NA	12212277	12229488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
Isoform_167935_35	chr7	+	4694	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	56	-2	-14	2	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGACCTTTTTATTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	12212275	12230164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
Isoform_167939_23	chr7	+	3444	9	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-15	8	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	121.410203442709	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAGCGTGTAAGTCATT	NA	False	NA	35	True	NA	NA	NA	12568948	12584512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_12569092_12569373_12569455_12569881_12569988_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
Isoform_167942_337	chr7	+	3330	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	261	0	-15	0	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGACTATAGCGTGT	NA	False	NA	27	True	NA	NA	NA	12568948	12584504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
Isoform_167944_27	chr7	+	3607	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	-15	-1	-15	1	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGACTATAGCGTGTA	NA	False	NA	28	True	NA	NA	NA	12568672	12584505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
Isoform_167961_28	chr7	+	2241	4	FSM	ENSMUSG00000060397.7	ENSMUST00000144578.2	3834	4	10	1583	10	-2	multi-exon	FALSE	canonical	2	3	junction_3	3.55902608401044	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTTGTTGTGTGTAAT	NA	False	NA	NA	False	AATAAA	-34	NA	12615113	12625766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12615288_12618569_12618697_12618949_12619046_12623922
Isoform_167962_8	chr7	+	2892	2	NIC	ENSMUSG00000054715.12	novel	1826	3	NA	NA	-8	-29	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACCACATGGGCAGGGA	NA	False	NA	1	True	AATAAA	-12	NA	12631733	12642981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_12631805_12640160
Isoform_167966_3	chr7	+	3441	3	FSM	ENSMUSG00000054715.12	ENSMUST00000055528.11	2620	3	23	-844	2	0	multi-exon	FALSE	canonical	2	3	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGCTTCTCCAACATC	NA	False	NA	30	True	AATAAA	-41	NA	12631764	12643010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12631871_12637527_12638013_12640160
Isoform_167967_4	chr7	+	3299	3	FSM	ENSMUSG00000054715.12	ENSMUST00000055528.11	2620	3	27	-706	1	-138	multi-exon	FALSE	canonical	2	3	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCATGTCTCCTCTTG	NA	False	NA	11	True	AATACA	-15	NA	12631768	12642872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12631871_12637527_12638013_12640160
Isoform_167968_13	chr7	+	2814	2	FSM	ENSMUSG00000054715.12	ENSMUST00000119989.3	2087	2	-25	-702	1	-138	multi-exon	FALSE	canonical	3	22	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCATGTCTCCTCTTG	NA	False	NA	11	True	AATACA	-15	NA	12631768	12642872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12631871_12640160
Isoform_167969_10	chr7	+	2927	2	FSM	ENSMUSG00000054715.12	ENSMUST00000119989.3	2087	2	-29	-811	2	-29	multi-exon	FALSE	canonical	3	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACCACATGGGCAGGGA	NA	False	NA	1	True	AATAAA	-12	NA	12631764	12642981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12631871_12640160
Isoform_167973_5	chr7	+	2627	3	NIC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTCTGTTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	12631774	12642169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_12631908_12637527_12638013_12640160
Isoform_167974_17	chr7	+	2142	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	12	841	7	-1	multi-exon	FALSE	canonical	3	21	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTCTGTTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	12631774	12642169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12631908_12640160
Isoform_167975_12	chr7	+	2924	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	42	29	11	-29	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACCACATGGGCAGGGA	NA	False	NA	1	True	AATAAA	-12	NA	12631804	12642981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12631908_12640160
Isoform_167976_13	chr7	+	2815	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	42	138	11	-138	multi-exon	FALSE	canonical	3	21	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCATGTCTCCTCTTG	NA	False	NA	11	True	AATACA	-15	NA	12631804	12642872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12631908_12640160
Isoform_167977_5	chr7	+	3057	2	ISM	ENSMUSG00000054715.12	ENSMUST00000055528.11	2620	3	6035	-815	5983	-29	3prime_fragment	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACCACATGGGCAGGGA	NA	False	NA	1	True	AATAAA	-12	NA	12637776	12642981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_12638013_12640160
Isoform_16798_92	chr11	-	3693	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	-6	1	-6	0	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187463	102180126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
Isoform_167982_13839	chr7	+	733	6	FSM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	28	0	0	0	multi-exon	FALSE	canonical	3	14799	junction_5	1601.25238485381	13839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
Isoform_167986_243	chr7	+	766	6	FSM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	29	-1	1	0	multi-exon	FALSE	canonical	3	946	junction_1	6466.78878578851	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656245	12660613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12656350_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
Isoform_167998_3	chr7	+	3928	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	-14	401	-14	-378	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACTATGTCCTTCTACC	NA	False	NA	NA	False	NA	NA	NA	12699750	12707348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
Isoform_167999_3	chr7	+	4316	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	-8	7	-8	-7	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGCCACTGGAGTCAGC	NA	False	NA	NA	False	ATTAAA	-13	NA	12699756	12707742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
Isoform_16800_59	chr11	-	3845	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	-157	0	-157	0	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187614	102180125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
Isoform_168000_3	chr7	+	3504	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	413	398	148	-375	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTCCTTCTACCTCA	NA	False	NA	NA	False	NA	NA	NA	12700177	12707351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
Isoform_168001_10	chr7	+	2611	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	5	1699	-2	1411	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCGTGACACATGACTT	NA	False	NA	NA	False	TATAAA	-16	NA	12699769	12706050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
Isoform_168004_6	chr7	+	3282	6	FSM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	0	1333	0	41	multi-exon	FALSE	canonical	2	6	junction_1	10.7962956610126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGAGTTTTCAACACTG	NA	False	NA	NA	False	NA	NA	NA	12711774	12718308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
Isoform_168006_23	chr7	+	3583	5	FSM	ENSMUSG00000033961.17	ENSMUST00000108535.8	2594	5	1	-990	1	46	multi-exon	FALSE	canonical	3	25	junction_1	5.2618912949623	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTCAACACTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	12711775	12718313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772
Isoform_16801_15	chr11	-	3950	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	-263	1	-263	0	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187720	102180126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
Isoform_168014_21	chr7	+	3403	6	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	0	56	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	4.88262224629348	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCCATTTGTGCTCAC	NA	False	NA	NA	False	NA	NA	NA	12711774	12718323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
Isoform_168017_19123	chr7	+	2984	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	261	0	261	0	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	19123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
Isoform_168018_3286	chr7	+	3231	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	11	3	11	0	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	3286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCATGCCTCAGCTGT	NA	False	NA	55	True	AATAAA	-16	NA	12758089	12764959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
Isoform_168019_397	chr7	+	3294	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	-44	-5	-44	5	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCAGCTGTCTGGGGAC	NA	False	NA	63	True	AATAAA	-24	NA	12758034	12764967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
Isoform_16802_14	chr11	-	4147	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	-459	0	-459	0	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187916	102180125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
Isoform_16804_4	chr11	-	3800	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	-43	-69	-43	69	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGATTTTTATTCATT	NA	False	NA	63	True	NA	NA	NA	102187500	102180056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
Isoform_1681_13	chr10	-	1056	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	126	257	-2	-257	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGACTGGTTTTGTGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	13744575	13528451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_16811_5	chr11	-	3768	13	FSM	ENSMUSG00000059995.13	ENSMUST00000107132.3	3706	13	-62	0	-60	0	multi-exon	FALSE	canonical	3	20	junction_7	41.9393576753653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187517	102180126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
Isoform_16812_6	chr11	-	3708	13	FSM	ENSMUSG00000059995.13	ENSMUST00000107132.3	3706	13	-1	-1	1	0	multi-exon	FALSE	canonical	3	20	junction_7	41.9393576753653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187456	102180125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
Isoform_168125_63	chr7	+	3277	28	FSM	ENSMUSG00000056394.21	ENSMUST00000177588.10	3174	28	-104	1	-104	-1	multi-exon	TRUE	canonical	3	470	junction_1	193.081793225492	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	1003	False	NA	29	True	AATAAA	-17	NA	13011134	13045349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_13011456_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_168132_83	chr7	+	3040	28	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	47	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	347.18983947761	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2676	False	NA	29	True	AATAAA	-17	NA	13012807	13045349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023313_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_168135_1939	chr7	+	3052	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	40	-1	31	1	multi-exon	FALSE	canonical	0	0	junction_1	267.791767474326	1939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2660	False	NA	31	True	AATAAA	-19	NA	13012791	13045351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_168136_210	chr7	+	3101	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	-9	-1	-9	1	multi-exon	FALSE	canonical	0	0	junction_1	267.791767474326	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2611	False	NA	31	True	AATAAA	-19	NA	13012742	13045351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_168137_82	chr7	+	3396	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	-304	-1	-304	1	multi-exon	FALSE	canonical	0	0	junction_1	267.791767474326	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2316	False	NA	31	True	AATAAA	-19	NA	13012447	13045351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_168145_42	chr7	+	3124	28	FSM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	43	-1	43	1	multi-exon	FALSE	canonical	3	577	junction_1	177.886980349259	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	3102	False	NA	31	True	AATAAA	-19	NA	13013233	13045351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_13013400_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_168178_4	chr7	+	2779	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	5	-694	5	694	multi-exon	FALSE	canonical	3	257	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	15630100	15634917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15630183_15631328_15631478_15632369
Isoform_168179_127	chr7	+	2134	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	-46	2	1	-2	multi-exon	FALSE	canonical	3	257	junction_2	3	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGATCTGTGCCTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	15630049	15634221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15630183_15631328_15631478_15632369
Isoform_168182_4	chr7	+	2231	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	-67	-74	-20	74	multi-exon	FALSE	canonical	3	257	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAATCTCTTTCTCTTT	NA	False	NA	NA	False	AATGAA	-15	NA	15630028	15634297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15630183_15631328_15631478_15632369
Isoform_168183_141	chr7	+	878	5	FSM	ENSMUSG00000074365.14	ENSMUST00000098801.9	934	5	53	3	6	-3	multi-exon	FALSE	canonical	3	145	junction_3	373.339992500134	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACTGCTTTAAAAGAA	NA	False	NA	-14	True	AATAAA	-21	NA	15630101	15637942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15630183_15631328_15631478_15632369_15632542_15636774_15636933_15637624
Isoform_168185_240	chr7	+	595	3	FSM	ENSMUSG00000074365.14	ENSMUST00000171280.3	571	3	-27	3	-27	-3	multi-exon	FALSE	canonical	3	864	junction_1	106.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACTGCTTTAAAAGAA	NA	False	NA	-14	True	AATAAA	-21	NA	15635543	15637942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15635663_15636774_15636933_15637624
Isoform_168187_308	chr7	+	2373	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	145	-1	-5	1	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCACATCTCATTCATT	NA	False	NA	3	True	AATAAA	-18	NA	15832527	15851901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
Isoform_168188_45	chr7	+	2396	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	122	-1	-28	1	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCACATCTCATTCATT	NA	False	NA	3	True	AATAAA	-18	NA	15832504	15851901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
Isoform_168190_1789	chr7	+	1523	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	146	848	-4	388	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832528	15851052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
Isoform_168191_300	chr7	+	1548	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	122	847	-28	389	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	30	True	AATAAA	-20	NA	15832504	15851053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
Isoform_168193_35	chr7	+	1668	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	2	847	2	389	multi-exon	TRUE	canonical	3	1130	junction_8	65.9754499795189	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	30	True	AATAAA	-20	NA	15832384	15851053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
Isoform_168214_224	chr7	+	1631	12	FSM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	-3	2	-3	-2	multi-exon	FALSE	canonical	3	76	junction_5	5.62609034427847	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCTTTGTCTGGCAAG	NA	False	NA	30	True	NA	NA	NA	15853816	15861439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
Isoform_168215_3	chr7	+	4234	10	FSM	ENSMUSG00000030376.9	ENSMUST00000211649.2	5261	10	477	550	-45	0	multi-exon	FALSE	canonical	0	0	junction_1	0.314269680527354	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCCGTGGGAAGTTGG	NA	False	NA	22	True	CATAAA	-23	NA	15864227	15894438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15864347_15867753_15868445_15874428_15875094_15878855_15879279_15884265_15884370_15884498_15884517_15886743_15886869_15887119_15887220_15891071_15891351_15892728
Isoform_168216_4	chr7	+	1768	13	FSM	ENSMUSG00000041420.19	ENSMUST00000002495.18	1731	13	-39	2	3	1	multi-exon	FALSE	canonical	3	8	junction_5	4.17997873466148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAAATTCTCATTTGTC	7655	False	NA	NA	False	AATAAA	-15	NA	15909315	15920427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912875_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
Isoform_168217_3	chr7	+	1924	12	FSM	ENSMUSG00000041420.19	ENSMUST00000175946.8	1925	12	1	0	1	0	multi-exon	FALSE	canonical	3	10	junction_3	3.73723723474445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTCTCATTTGT	7653	False	NA	NA	False	AATAAA	-14	NA	15909313	15920426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
Isoform_168218_292	chr7	+	1844	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	-32	2	-32	-2	multi-exon	FALSE	canonical	3	119	junction_1	49.2769948578667	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	24	True	AATAAA	-17	NA	16043508	16052128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
Isoform_168219_6	chr7	+	1928	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	-118	4	-118	-4	multi-exon	FALSE	canonical	3	119	junction_1	49.2769948578667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACTCTTTTTGTTAGC	NA	False	NA	22	True	AATAAA	-15	NA	16043422	16052126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
Isoform_168220_11	chr7	+	1851	4	NIC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-201	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	92.4589999224882	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	24	True	AATAAA	-17	NA	16044178	16052128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_16044464_16046050_16046340_16047551_16047743_16051042
Isoform_168221_47	chr7	+	1711	4	NIC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-60	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	92.4589999224882	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTTTTGTTAGCTTT	NA	False	NA	25	True	AATAAA	-18	NA	16044319	16052129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_16044464_16046050_16046340_16047551_16047743_16051042
Isoform_168225_5	chr7	+	7366	14	NIC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1294	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	34.2757699018835	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGTCTAGTCTCATC	3187	False	NA	18	True	ATTAAA	-22	NA	16133540	16171621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
Isoform_168229_10	chr7	+	5797	13	NIC	ENSMUSG00000059273.10	novel	6039	14	NA	NA	-12	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	31.572997429238	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGTGAGTCTAGT	4766	False	NA	12	True	ATTAAA	-16	NA	16135119	16171615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_16135232_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
Isoform_168236_14	chr7	+	4810	7	ISM	ENSMUSG00000059273.10	ENSMUST00000209289.2	5853	14	21244	5	7606	-4	3prime_fragment	FALSE	canonical	0	0	junction_3	33.9803864996658	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTGTGAGTCTAGTC	NA	False	NA	13	True	ATTAAA	-17	NA	16156375	16171616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
Isoform_168239_6	chr7	+	4847	6	ISM	ENSMUSG00000059273.10	ENSMUST00000098789.5	6039	14	24082	4	10444	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	39.8948618245508	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTGTGAGTCTAGTC	NA	False	NA	13	True	ATTAAA	-17	NA	16159213	16171616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
Isoform_168244_27	chr7	+	707	3	FSM	ENSMUSG00000019158.10	ENSMUST00000209536.2	699	3	-7	-1	-7	1	multi-exon	FALSE	canonical	3	42	junction_1	359.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGAGTGATAGCTCC	NA	False	NA	21	True	ATTAAA	-22	NA	16186880	16189420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16187096_16187981_16188139_16189085
Isoform_168246_12	chr7	+	3263	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	164	-2612	-20	2608	multi-exon	FALSE	canonical	3	728	junction_1	16.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGCCTGATTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	16186867	16192027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16187096_16188045_16188139_16189085
Isoform_168247_728	chr7	+	641	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	174	0	-10	0	multi-exon	FALSE	canonical	3	728	junction_1	16.5	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAGACTCTGAGTGATA	NA	False	NA	16	True	ATTAAA	-17	NA	16186877	16189415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16187096_16188045_16188139_16189085
Isoform_168249_54	chr7	+	832	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	2	2	2	-2	multi-exon	FALSE	canonical	3	580	junction_2	14.0423466699836	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTCTGAGCCCTC	NA	False	NA	17	True	AATAAA	-17	NA	16472336	16483217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
Isoform_168250_462	chr7	+	788	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	47	1	13	-1	multi-exon	FALSE	canonical	3	580	junction_2	14.0423466699836	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTGAGCCCTCA	NA	False	NA	18	True	AATAAA	-18	NA	16472381	16483218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
Isoform_168258_11619	chr7	+	2704	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	29	31	1	-31	multi-exon	FALSE	canonical	3	1461	junction_5	112.684293492927	11619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	42	True	AATAAA	-16	NA	16515293	16532168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
Isoform_168298_419	chr7	+	3088	18	FSM	ENSMUSG00000030374.16	ENSMUST00000019220.16	3535	18	445	2	17	2	multi-exon	FALSE	canonical	3	94	junction_8	104.795467294144	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550258	16574854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
Isoform_1683_5	chr10	-	1478	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-30	-9	-7	9	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGGCTGCAGTTAGAT	NA	False	NA	NA	False	AATAAA	-26	NA	13744731	13528185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_168300_1049	chr7	+	3067	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	17	-2	17	2	multi-exon	FALSE	canonical	3	350	junction_8	55.9168933502007	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550258	16574854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
Isoform_168301_143	chr7	+	3091	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	-8	-1	-8	1	multi-exon	FALSE	canonical	3	350	junction_8	55.9168933502007	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGGTTTTCCAGGCCAT	NA	False	NA	13	True	AATAAA	-13	NA	16550233	16574853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
Isoform_168308_26	chr7	+	2970	17	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	18	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_8	127.725719316824	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGGTTTTCCAGGCCAT	NA	False	NA	13	True	AATAAA	-13	NA	16550259	16574853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
Isoform_168326_9	chr7	+	3191	19	FSM	ENSMUSG00000041187.17	ENSMUST00000168093.9	3251	19	48	12	48	-12	multi-exon	FALSE	canonical	2	2	junction_2	2.9465401347058	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGAAGCACCCACTGG	NA	False	NA	NA	False	AATAAA	-21	NA	16576874	16604285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16576959_16577406_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
Isoform_168327_10	chr7	+	3664	18	FSM	ENSMUSG00000041187.17	ENSMUST00000086104.6	3628	18	-134	98	29	-6	multi-exon	FALSE	canonical	2	2	junction_1	3.00518582928113	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACCCACTGGCCATGG	NA	False	NA	NA	False	AATAAA	-27	NA	16576855	16604291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
Isoform_168328_78	chr7	+	2772	4	FSM	ENSMUSG00000078794.5	ENSMUST00000108493.3	2989	4	47	170	47	-170	multi-exon	FALSE	canonical	3	26	junction_3	6.53197264742181	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCCTGGATTCTTGTTCT	NA	False	NA	19	True	AATAAA	-15	NA	16609288	16621217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16609599_16617051_16617149_16617282_16617436_16619005
Isoform_168329_170	chr7	+	703	3	FSM	ENSMUSG00000030413.8	ENSMUST00000032573.8	694	3	-11	2	-11	-2	multi-exon	FALSE	canonical	3	241	junction_2	21	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGCTCCCTCCGGTGAA	NA	False	NA	4	True	AATAAA	-13	NA	18618593	18624364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18618899_18623202_18623325_18624088
Isoform_168330_6	chr7	+	2009	4	FSM	ENSMUSG00000030411.17	ENSMUST00000032571.10	8372	4	-3	6366	-3	-6366	multi-exon	TRUE	canonical	1	1	junction_1	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTTTCTTTCCCTCC	NA	False	NA	4	True	AATAGA	-14	NA	18659809	18692878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18660090_18676140_18676285_18684377_18684545_18691460
Isoform_168331_7	chr7	+	2263	3	FSM	ENSMUSG00000048481.16	ENSMUST00000059331.9	2173	3	-89	-1	-89	1	multi-exon	FALSE	canonical	2	7	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGGCTCTGAGACAGG	6875	False	NA	NA	False	AATAAA	-19	NA	18725080	18735690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18725280_18725756_18726546_18734415
Isoform_168332_33	chr7	+	2114	3	FSM	ENSMUSG00000048481.16	ENSMUST00000059331.9	2173	3	60	-1	-14	1	multi-exon	FALSE	canonical	2	7	junction_2	1	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGGCTCTGAGACAGG	7024	False	NA	NA	False	AATAAA	-19	NA	18725229	18735690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18725280_18725756_18726546_18734415
Isoform_168334_22	chr7	+	4727	22	ISM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	28	2865	-15	-1	5prime_fragment	FALSE	canonical	3	129	junction_5	14.4793229693516	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACATGGCCAGTGGTGTT	NA	False	NA	6	True	AATAAA	-19	NA	18758329	18785677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
Isoform_168335_530	chr7	+	4067	27	FSM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	47	2	1	-2	multi-exon	FALSE	canonical	3	103	junction_24	19.2187654844311	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGAGGATGTGCCTGT	NA	False	NA	13	True	AATAAA	-27	NA	18758348	18788540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
Isoform_168336_51	chr7	+	4146	27	FSM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	-32	2	-32	-2	multi-exon	FALSE	canonical	3	103	junction_24	19.2187654844311	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGAGGATGTGCCTGT	NA	False	NA	13	True	AATAAA	-27	NA	18758269	18788540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
Isoform_168348_11	chr7	+	3407	3	ISM	ENSMUSG00000030410.17	ENSMUST00000032570.14	2494	5	-14	0	-14	0	intron_retention	FALSE	canonical	3	302	junction_1	22	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	14	True	ACTAAA	-14	NA	18810137	18816701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_18810627_18811979_18812163_18813966
Isoform_168351_185	chr7	+	2508	5	FSM	ENSMUSG00000030410.17	ENSMUST00000032570.14	2494	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	219	junction_3	47.1858029496161	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	14	True	ACTAAA	-14	NA	18810137	18816701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18815843_18815919_18816200
Isoform_168355_132	chr7	+	2433	4	FSM	ENSMUSG00000030410.17	ENSMUST00000108479.2	2388	4	-45	0	-14	0	multi-exon	FALSE	canonical	3	165	junction_3	77.0757203447796	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	14	True	ACTAAA	-14	NA	18810137	18816701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18816200
Isoform_168356_21	chr7	+	3860	4	FSM	ENSMUSG00000030410.17	ENSMUST00000146429.2	2080	4	-1780	0	-14	0	multi-exon	FALSE	canonical	3	219	junction_2	52.8288641642889	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810137	18816700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18812163_18813966_18815227_18815843_18815919_18816200
Isoform_168357_16	chr7	+	3742	3	NIC	ENSMUSG00000030410.17	novel	2388	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	165	junction_2	90.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	14	True	ACTAAA	-14	NA	18810181	18816701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_18812163_18813966_18815227_18816200
Isoform_168359_9	chr7	+	2796	3	FSM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	4	207	4	-207	multi-exon	FALSE	canonical	2	8	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGAGCTATTGAGGGT	NA	False	NA	3	True	ATTAAA	-14	NA	18828522	18832267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18829344_18830156_18830945_18831080
Isoform_168360_4	chr7	+	2853	3	FSM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	-52	206	-52	-206	multi-exon	FALSE	canonical	2	8	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAGCTATTGAGGGTA	NA	False	NA	4	True	ATTAAA	-15	NA	18828466	18832268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18829344_18830156_18830945_18831080
Isoform_168361_3	chr7	+	3122	3	FSM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	-322	207	-322	-207	multi-exon	FALSE	canonical	2	8	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGAGCTATTGAGGGT	NA	False	NA	3	True	ATTAAA	-14	NA	18828196	18832267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18829344_18830156_18830945_18831080
Isoform_168364_202	chr7	+	2953	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	2	1918	2	442	multi-exon	FALSE	canonical	3	58	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCCAGCCTGGCGTGTGT	9339	False	NA	26	True	TATAAA	-19	NA	18853785	18872179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18853862_18869302
Isoform_168366_4	chr7	+	4863	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	11	-1	11	1	multi-exon	FALSE	canonical	3	58	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATTATAAAAAAAAA	9348	False	NA	NA	False	NA	NA	NA	18853794	18874098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18853862_18869302
Isoform_168368_2526	chr7	+	511	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	97	812	-40	-812	multi-exon	FALSE	canonical	3	3249	junction_1	86	2526	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCCAGTGGTCTTCTC	NA	False	NA	5	True	AATAAA	-23	NA	18883743	18886655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18883820_18885142_18885323_18886400
Isoform_168373_49	chr7	+	2522	21	ISM	ENSMUSG00000040811.16	ENSMUST00000117338.8	2765	22	2930	-222	-1819	0	3prime_fragment	FALSE	canonical	3	14	junction_1	46.9870992933167	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTCTGGTCT	NA	False	NA	22	True	AATACA	-14	NA	18913275	18940404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_18913371_18913450_18913575_18913675_18913781_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_168376_305	chr7	+	2251	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	2	2	2	1	multi-exon	FALSE	canonical	3	61	junction_1	24.7224719088515	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915096	18940405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_168377_48	chr7	+	2283	19	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	33.4490583749803	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915126	18940405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_18915211_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_168378_73	chr7	+	2238	19	NIC	ENSMUSG00000040811.16	novel	596	6	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	28.4707452191426	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915241	18940405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_18915281_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_168380_35	chr7	+	2338	19	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	28.4707452191426	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915141	18940405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_18915281_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_168381_17	chr7	+	2337	19	Fusion	ENSMUSG00000065543.3_ENSMUSG00000040811.16	novel	593	5	NA	NA	-54	1	multi-exon	FALSE	canonical	3	11	junction_1	34.4726139291918	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915335	18940405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_18915474_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_168382_15	chr7	+	2405	19	NIC	ENSMUSG00000040811.16	novel	596	6	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	34.4726139291918	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915267	18940405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_18915474_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_168389_17	chr7	+	2030	2	FSM	ENSMUSG00000044317.8	ENSMUST00000060225.6	2882	2	1	851	1	-851	multi-exon	FALSE	canonical	2	8	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGAAAAAAATGAGGTT	NA	False	NA	NA	False	NA	NA	NA	18946463	18957248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18946560_18955314
Isoform_168395_155	chr7	+	3291	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	72	3	23	-3	multi-exon	FALSE	canonical	3	147	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTTGTCTTCAATTT	3305	False	NA	6	True	AATAAA	-11	NA	18962330	18981790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18962510_18978678
Isoform_168396_68	chr7	+	3342	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	21	3	21	-3	multi-exon	FALSE	canonical	3	147	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTTGTCTTCAATTT	3254	False	NA	6	True	AATAAA	-11	NA	18962279	18981790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18962510_18978678
Isoform_168399_7	chr7	+	3714	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	59	-407	10	407	multi-exon	FALSE	canonical	3	147	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3292	False	NA	NA	False	NA	NA	NA	18962317	18982200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18962510_18978678
Isoform_1684_4	chr10	-	2062	3	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-30	147963	-7	-2267	5prime_fragment	FALSE	canonical	3	116	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCAGTTCCTTCTCCC	NA	False	NA	NA	False	NA	NA	NA	13744731	13676157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_13677694_13704986_13705143_13744361
Isoform_168400_5	chr7	+	3505	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	-142	3	-142	-3	multi-exon	FALSE	canonical	3	147	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTTGTCTTCAATTT	3091	False	NA	6	True	AATAAA	-11	NA	18962116	18981790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18962510_18978678
Isoform_168403_154	chr7	+	1943	10	FSM	ENSMUSG00000030401.17	ENSMUST00000032559.17	1990	10	40	7	29	-7	multi-exon	FALSE	canonical	3	51	junction_4	11.5662343819316	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCACTGCATTCTGTGT	NA	False	NA	5	True	AATAAA	-13	NA	19016588	19030078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
Isoform_168404_11	chr7	+	2035	10	FSM	ENSMUSG00000030401.17	ENSMUST00000032559.17	1990	10	-39	-6	-39	6	multi-exon	FALSE	canonical	3	51	junction_4	11.5662343819316	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTTTAAAGTCCCTC	NA	False	NA	18	True	AATAAA	-26	NA	19016509	19030091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
Isoform_168406_9	chr7	+	2272	9	NIC	ENSMUSG00000030401.17	novel	1990	10	NA	NA	26	0	intron_retention	FALSE	canonical	3	51	junction_4	11.6397755562554	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTCTGTGTTTTAAAG	NA	False	NA	12	True	AATAAA	-20	NA	19016585	19030085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
Isoform_168407_4	chr7	+	1058	7	FSM	ENSMUSG00000030401.17	ENSMUST00000108468.5	1076	7	18	0	18	0	multi-exon	FALSE	canonical	1	1	junction_1	28.3279406632784	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTCTGTGTTTTAAAG	598	False	NA	12	True	AATAAA	-20	NA	19025011	19030085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19025102_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
Isoform_168408_350	chr7	+	1062	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	313	0	-10	0	multi-exon	TRUE	canonical	3	315	junction_9	39.5851948880006	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1024	False	NA	15	True	AATAAA	-20	NA	19079015	19090449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
Isoform_168411_4	chr7	+	1025	10	NIC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	110.585311461835	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1056	False	NA	15	True	AATAAA	-20	NA	19079047	19090449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088255_19088351_19089025_19089098_19089217_19089287_19090343
Isoform_168416_3	chr7	+	3407	15	NIC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	17.9778775619552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCATTTTGATTCTGTT	697	False	NA	NA	False	AATAAA	-20	NA	19093673	19112463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19093724_19094728_19094762_19094951_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
Isoform_168417_9	chr7	+	3370	14	NIC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	12.7483610734546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAACATCATTTTGAT	695	False	NA	NA	False	AATAAA	-14	NA	19093671	19112457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19093724_19094951_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
Isoform_168418_3	chr7	+	3439	15	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	18.3915741577495	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGAACATCATTTTGA	695	False	NA	NA	False	AATAAA	-13	NA	19093671	19112456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_19093724_19094589_19094660_19094951_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
Isoform_168419_4	chr7	+	3436	15	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	20.5172898715564	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATCATTTTGATTCTG	699	False	NA	NA	False	AATAAA	-18	NA	19093675	19112461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_19093724_19094589_19094660_19094951_19095242_19102470_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
Isoform_168420_12	chr7	+	3149	13	FSM	ENSMUSG00000040734.15	ENSMUST00000047621.14	3130	13	-18	-1	-18	1	multi-exon	FALSE	canonical	3	31	junction_4	11.000946928939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAACATCATTTTGATTC	396	False	NA	NA	False	AATAAA	-16	NA	19095122	19112459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
Isoform_168424_383	chr7	+	3570	23	FSM	ENSMUSG00000030400.18	ENSMUST00000062831.16	3578	23	7	1	-1	1	multi-exon	TRUE	canonical	3	88	junction_1	20.1272809394744	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGGTTTGCTTCTGATA	NA	False	NA	12	True	AATAAA	-20	NA	19115941	19129618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
Isoform_168429_15	chr7	+	3469	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-1	0	intron_retention	TRUE	canonical	2	2	junction_1	34.8788639062727	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19115941	19129617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19115985_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
Isoform_16843_401	chr11	-	3240	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	-21	67	3	2	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9140	False	NA	-7	True	NA	NA	NA	102207527	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
Isoform_168437_366	chr7	+	760	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	19	6	1	1	multi-exon	FALSE	canonical	3	436	junction_1	62.2009646227452	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACCTGTGCAGTGCTT	526	False	NA	15	True	AGTAAA	-16	NA	19242655	19250064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
Isoform_168439_10	chr7	+	747	6	NIC	ENSMUSG00000002043.18	novel	785	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	193.692126840509	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACCTGTGCAGTGCTT	521	False	NA	15	True	AGTAAA	-16	NA	19242650	19250064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19242758_19248125_19248194_19248346_19248465_19248949_19249016_19249128_19249223_19249770
Isoform_16844_177	chr11	-	3267	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	-48	67	-23	2	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9113	False	NA	-7	True	NA	NA	NA	102207554	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
Isoform_168441_9	chr7	+	1234	5	NIC	ENSMUSG00000002043.18	novel	785	6	NA	NA	-2	1	intron_retention	FALSE	canonical	3	436	junction_1	68.656299783778	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACCTGTGCAGTGCTT	519	False	NA	15	True	AGTAAA	-16	NA	19242648	19250064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19242758_19248125_19248194_19248346_19249016_19249128_19249223_19249770
Isoform_168443_85	chr7	+	692	5	FSM	ENSMUSG00000002043.18	ENSMUST00000147114.2	719	5	21	6	1	1	multi-exon	FALSE	canonical	3	104	junction_1	197.958802532244	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACCTGTGCAGTGCTT	526	False	NA	15	True	AGTAAA	-16	NA	19242655	19250064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19242758_19248346_19248465_19248931_19249016_19249128_19249223_19249770
Isoform_168446_5	chr7	+	1159	4	NIC	ENSMUSG00000002043.18	novel	719	5	NA	NA	1	1	intron_retention	FALSE	canonical	3	104	junction_1	221.490406112771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACCTGTGCAGTGCTT	526	False	NA	15	True	AGTAAA	-16	NA	19242655	19250064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19242758_19248346_19249016_19249128_19249223_19249770
Isoform_168449_90	chr7	+	1559	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	-30	1	-30	-1	multi-exon	FALSE	canonical	3	235	junction_1	5.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGGACTTTCTTGGGG	697	False	NA	25	True	AATAAA	-20	NA	19311181	19314580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19311554_19311741_19311886_19313537
Isoform_168450_473	chr7	+	1492	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	36	2	36	-2	multi-exon	FALSE	canonical	3	235	junction_1	5.5	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCTGGACTTTCTTGGG	763	False	NA	24	True	AATAAA	-19	NA	19311247	19314579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_19311554_19311741_19311886_19313537
Isoform_168455_5	chr7	+	3421	10	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-20	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	8.7658146325849	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGAATGTTTCCTCAA	NA	False	NA	-2	True	AATAAA	-17	NA	19725369	19796862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19725614_19741948_19742019_19753034_19753368_19757035_19758615_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
Isoform_168456_11	chr7	+	3559	11	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-20	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	7.39256383131049	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAATGTTTCCTCA	NA	False	NA	-3	True	AATAAA	-16	NA	19725369	19796861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_19725614_19741948_19742019_19753060_19753368_19757035_19758615_19760440_19760606_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
Isoform_168457_18	chr7	+	3990	6	FSM	ENSMUSG00000057101.9	ENSMUST00000206184.2	827	6	-22	-3141	1	1	multi-exon	FALSE	canonical	3	9	junction_3	37.880865882395	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAACAGATGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	23781349	23807124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_23781664_23784850_23784932_23785912_23786017_23797245_23797321_23800872_23800994_23803829
Isoform_168459_165	chr7	+	3859	5	FSM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	28	14	-2	1	multi-exon	FALSE	canonical	3	55	junction_2	15.0499169432924	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAACAGATGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	23781376	23807124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800872_23800994_23803829
Isoform_168460_53	chr7	+	3908	5	FSM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	-21	14	-21	1	multi-exon	FALSE	canonical	3	55	junction_2	15.0499169432924	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAACAGATGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	23781327	23807124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800872_23800994_23803829
Isoform_168462_13	chr7	+	3804	4	NIC	ENSMUSG00000057101.9	novel	3901	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	41.2660743091573	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACAGATGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	23781349	23807123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_23781664_23797245_23797321_23800872_23800994_23803829
Isoform_168463_5	chr7	+	3198	4	FSM	ENSMUSG00000052675.12	ENSMUST00000215113.2	2628	4	-164	-406	-164	149	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACCCATGCTGCTCC	NA	False	NA	NA	False	AATAAA	-7	NA	23817629	23827067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_23817809_23821658_23821786_23823343_23823428_23824259
Isoform_168464_3	chr7	+	3190	4	ISM	ENSMUSG00000052675.12	ENSMUST00000005413.4	3044	5	5901	-149	-144	149	3prime_fragment	FALSE	canonical	0	0	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACCCATGCTGCTCC	NA	False	NA	NA	False	AATAAA	-7	NA	23817649	23827067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_23817809_23821658_23821786_23823343_23823440_23824259
Isoform_168465_108	chr7	+	3439	4	FSM	ENSMUSG00000047603.10	ENSMUST00000056549.9	3373	4	-67	1	1	-1	multi-exon	TRUE	canonical	3	32	junction_3	6.18241233033047	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGTTTCTCATCCTT	NA	False	NA	5	True	AATAAA	-13	NA	23833599	23842665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_23833913_23834682_23834741_23836470_23836598_23839724
Isoform_168466_7	chr7	+	2327	4	FSM	ENSMUSG00000068962.8	ENSMUST00000205309.2	1037	4	-17	-1273	-17	89	multi-exon	TRUE	canonical	2	5	junction_1	13.589211407093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGTGATTCGAAGTCT	NA	False	NA	NA	False	NA	NA	NA	23874467	23881832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_23874575_23875533_23875592_23877174_23877302_23879797
Isoform_168467_4	chr7	+	3306	3	FSM	ENSMUSG00000068962.8	ENSMUST00000206547.2	3154	3	-42	-110	-16	110	multi-exon	FALSE	canonical	2	10	junction_2	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGCCTCAGTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	23874468	23881853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_23875592_23877174_23877302_23879797
Isoform_168468_24	chr7	+	2533	4	FSM	ENSMUSG00000055305.16	ENSMUST00000108438.10	3508	4	-1	976	-1	-9	multi-exon	TRUE	canonical	3	7	junction_2	2.44948974278318	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAAAAGGATTCTGATT	NA	False	NA	NA	False	NA	NA	NA	23969843	23976243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_23970107_23971037_23971096_23972672_23972800_23974158
Isoform_168469_13	chr7	+	3157	3	FSM	ENSMUSG00000002210.12	ENSMUST00000139481.2	649	3	-94	-2414	11	-8	multi-exon	FALSE	canonical	3	143	junction_1	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	24099054	24107690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24099317_24102816_24102973_24104951
Isoform_168470_5	chr7	+	3074	4	ISM	ENSMUSG00000002210.12	ENSMUST00000146381.8	1620	6	8	8	8	-8	intron_retention	FALSE	canonical	3	128	junction_3	9.89949493661167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	24099051	24107690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112
Isoform_168471_335	chr7	+	2241	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	0	1	0	-1	multi-exon	FALSE	canonical	3	128	junction_3	14.7828462881374	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGGTTTGTTCTTTCT	NA	False	NA	18	True	AATAAA	-18	NA	24099043	24122202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
Isoform_168475_47	chr7	+	2235	14	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_3	34.9034170348701	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGGTTTGTTCTTTCT	NA	False	NA	18	True	AATAAA	-18	NA	24099040	24122202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105121_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
Isoform_168478_7	chr7	+	2326	13	NIC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	130	junction_4	14.0227988964004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGGTTTGTTCTTTCT	NA	False	NA	18	True	AATAAA	-18	NA	24099044	24122202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_24099317_24102816_24102973_24104951_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
Isoform_168480_23	chr7	+	1503	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	4	-1	3	0	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTAGGTCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	24161912	24175393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
Isoform_168481_5	chr7	+	1554	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	-47	-1	-47	0	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTAGGTCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	24161861	24175393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
Isoform_168483_281	chr7	+	2127	9	FSM	ENSMUSG00000054793.9	ENSMUST00000068023.8	2161	9	32	2	32	-2	multi-exon	FALSE	canonical	3	44	junction_8	7.9912061042123	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGGGTGGCTGTGTGT	6433	False	NA	NA	False	ATTAAA	-15	NA	24181479	24203962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24181588_24198580_24198728_24198937_24199091_24199348_24199484_24199900_24200066_24200156_24200248_24200989_24201163_24202090_24202220_24202936
Isoform_168489_12	chr7	+	1223	3	FSM	ENSMUSG00000064264.15	ENSMUST00000176880.2	1045	3	83	-261	-10	0	multi-exon	FALSE	canonical	3	38	junction_1	119	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCGAGCTGCGTGAGT	NA	False	NA	34	True	AATAAA	-28	NA	24206513	24215105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24206862_24209947_24210179_24214461
Isoform_168491_13	chr7	+	1171	3	NIC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	-10	-13	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	184.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_24206862_24209947_24210179_24214500
Isoform_168492_203	chr7	+	1187	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	-41	13	-10	-13	multi-exon	FALSE	canonical	3	276	junction_2	107	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24206862_24209970_24210179_24214461
Isoform_168494_27	chr7	+	1260	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	-101	0	23	0	multi-exon	FALSE	canonical	3	276	junction_2	107	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCGAGCTGCGTGAGT	NA	False	NA	34	True	AATAAA	-28	NA	24206453	24215105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24206862_24209970_24210179_24214461
Isoform_168499_320	chr7	+	1148	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	19	15	-10	-13	multi-exon	FALSE	canonical	3	407	junction_2	41.5	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24206862_24209970_24210179_24214500
Isoform_1685_3	chr10	-	2161	3	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-29	147863	-6	-2167	5prime_fragment	FALSE	canonical	3	116	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAATAAAATATAATAAG	NA	False	NA	NA	False	NA	NA	NA	13744730	13676057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_13677694_13704986_13705143_13744361
Isoform_168502_34	chr7	+	1396	4	NNC	ENSMUSG00000064264.15	novel	1159	3	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	89.1777251709566	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214461
Isoform_168503_9	chr7	+	1463	4	NNC	ENSMUSG00000064264.15	novel	1159	3	NA	NA	14	-15	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	89.1777251709566	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGCTCCGCATATGT	NA	False	NA	19	True	AATAAA	-13	NA	24206444	24215090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214461
Isoform_168506_74	chr7	+	1357	4	NNC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	150.608395811418	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214500
Isoform_168511_9	chr7	+	6118	3	FSM	ENSMUSG00000041037.9	ENSMUST00000049020.9	6083	3	-35	0	-35	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTGTCTTCTATTTA	NA	False	NA	15	True	AATAAA	-16	NA	24230078	24238025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24230330_24230808_24231341_24232690
Isoform_168513_666	chr7	+	2104	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	48	3	0	0	multi-exon	FALSE	canonical	3	337	junction_4	31.1527862919194	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACGGTTTCTCTCTTAG	NA	False	NA	4	True	AATAAA	-16	NA	24246622	24272860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
Isoform_168514_34	chr7	+	2151	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	1	3	1	0	multi-exon	FALSE	canonical	3	337	junction_4	31.1527862919194	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACGGTTTCTCTCTTAG	NA	False	NA	4	True	AATAAA	-16	NA	24246575	24272860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
Isoform_168519_85	chr7	+	963	7	ISM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	6339	1	6339	-1	3prime_fragment	FALSE	canonical	3	79	junction_1	14.7384606462894	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGTTCTGCTTGCTTT	NA	False	NA	8	True	AATAAA	-23	NA	24293306	24308349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
Isoform_168523_5	chr7	+	1625	9	FSM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	2	-8	2	8	multi-exon	FALSE	canonical	3	8	junction_1	6.69771416230941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGATTATCATTGTGAC	NA	False	NA	12	True	NA	NA	NA	24569483	24577084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24569598_24571902_24572131_24572204_24572360_24573346_24573424_24573622_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
Isoform_168524_8	chr7	+	1069	5	ISM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	4113	2	4113	-2	3prime_fragment	FALSE	canonical	3	13	junction_4	5.31507290636732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATCGAGAGTTGATTA	NA	False	NA	2	True	NA	NA	NA	24573594	24577074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
Isoform_168527_218	chr7	+	591	7	FSM	ENSMUSG00000040952.17	ENSMUST00000129847.8	593	7	0	2	0	0	multi-exon	FALSE	canonical	3	397	junction_3	8759.20174096298	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584057	24589229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
Isoform_168530_1849	chr7	+	551	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	222	1	-40	1	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584017	24589230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
Isoform_168531_7446	chr7	+	511	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	262	1	0	1	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	7446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584057	24589230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
Isoform_168539_112	chr7	+	698	6	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	10491.1802119685	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584057	24589230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_24584280_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
Isoform_168542_137	chr7	+	681	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	-49	1	14	1	multi-exon	FALSE	canonical	3	279	junction_1	10447.7852504729	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584089	24589230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
Isoform_168543_149	chr7	+	508	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	124	1	25	1	multi-exon	FALSE	canonical	3	279	junction_1	10447.7852504729	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584262	24589230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
Isoform_168558_100	chr7	+	3227	29	FSM	ENSMUSG00000040940.19	ENSMUST00000047873.16	3212	29	-14	-1	-14	1	multi-exon	FALSE	canonical	3	35	junction_1	58.1352662647508	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	8540	False	NA	32	True	AATATA	-14	NA	24602447	24626015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_168560_13	chr7	+	3332	29	FSM	ENSMUSG00000040940.19	ENSMUST00000047873.16	3212	29	-119	-1	6	1	multi-exon	FALSE	canonical	3	35	junction_1	58.1352662647508	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	8435	False	NA	32	True	AATATA	-14	NA	24602342	24626015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_168561_16	chr7	+	3208	29	FSM	ENSMUSG00000040940.19	ENSMUST00000206508.2	3195	29	-17	4	2	1	multi-exon	FALSE	canonical	3	24	junction_11	75.6323006258515	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	8556	False	NA	32	True	AATATA	-14	NA	24602463	24626015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_168564_424	chr7	+	3227	29	FSM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	-15	2	-13	1	multi-exon	FALSE	canonical	3	251	junction_1	33.6220742600902	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	9909	False	NA	32	True	AATATA	-14	NA	24603816	24626015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_168565_303	chr7	+	3255	29	FSM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	-45	4	4	-1	multi-exon	FALSE	canonical	3	251	junction_1	33.6220742600902	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATCTGTGTGTGTGAG	9879	False	NA	30	True	AATATA	-12	NA	24603786	24626013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_168566_15	chr7	+	3413	28	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-11	0	intron_retention	FALSE	canonical	3	251	junction_1	33.2996537671954	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9862	False	NA	31	True	AATATA	-13	NA	24603769	24626014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_168569_91	chr7	+	3224	29	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	60.0176844686597	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	9909	False	NA	32	True	AATATA	-14	NA	24603816	24626015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_168574_373	chr7	+	3077	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	51	1012	-28	0	multi-exon	FALSE	canonical	3	224	junction_1	0	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTTGTCAGGCCTAG	5006	False	NA	22	True	AATAAA	-18	NA	24776680	24781905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24776812_24778959
Isoform_168575_129	chr7	+	3100	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	29	1011	29	1	multi-exon	FALSE	canonical	3	224	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	4984	False	NA	23	True	AATAAA	-19	NA	24776658	24781906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24776812_24778959
Isoform_168578_13	chr7	+	3078	2	FSM	ENSMUSG00000045252.12	ENSMUST00000053410.11	3145	2	67	0	67	0	multi-exon	FALSE	canonical	3	92	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTTGTCAGGCCTAG	5101	False	NA	22	True	AATAAA	-18	NA	24776775	24781905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24776908_24778959
Isoform_16858_122	chr11	-	3487	21	FSM	ENSMUSG00000020923.18	ENSMUST00000107123.10	2759	21	-421	-307	-185	2	multi-exon	FALSE	canonical	3	90	junction_20	173.298954122637	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9955	False	NA	-7	True	NA	NA	NA	102208882	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
Isoform_168580_4	chr7	+	5635	20	NIC	ENSMUSG00000005442.14	novel	6096	20	NA	NA	-168	-1	intron_retention	TRUE	canonical	3	38	junction_9	26.7689405334862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	322	False	NA	11	True	ATTAAA	-13	NA	24982066	24993569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
Isoform_168581_3	chr7	+	5618	20	FSM	ENSMUSG00000005442.14	ENSMUST00000163320.8	6096	20	476	2	-155	1	multi-exon	FALSE	canonical	3	37	junction_13	27.4875947844843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGTGGGCTGCTGGCTT	335	False	NA	10	True	ATTAAA	-12	NA	24982079	24993568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
Isoform_168582_3	chr7	+	4129	13	ISM	ENSMUSG00000005442.14	ENSMUST00000167379.2	4732	15	1440	-3	1440	0	3prime_fragment	FALSE	canonical	3	38	junction_2	28.352934396441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	4943	False	NA	12	True	ATTAAA	-14	NA	24986687	24993570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
Isoform_168583_5	chr7	+	2019	7	ISM	ENSMUSG00000005442.14	ENSMUST00000163320.8	6096	20	9113	0	84	0	3prime_fragment	FALSE	canonical	3	51	junction_3	29.5658398982489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	194	False	NA	12	True	ATTAAA	-14	NA	24990716	24993570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
Isoform_168584_4	chr7	+	2221	7	ISM	ENSMUSG00000005442.14	ENSMUST00000163320.8	6096	20	8911	0	-81	0	3prime_fragment	FALSE	canonical	3	51	junction_3	29.5658398982489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	-8	True	NA	12	True	ATTAAA	-14	NA	24990514	24993570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
Isoform_168586_3	chr7	+	1692	6	ISM	ENSMUSG00000005442.14	ENSMUST00000167379.2	4732	15	5900	-3	-212	0	3prime_fragment	FALSE	canonical	3	45	junction_2	33.8254342174642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	625	False	NA	12	True	ATTAAA	-14	NA	24991147	24993570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
Isoform_168590_3	chr7	+	1319	3	FSM	ENSMUSG00000058741.5	ENSMUST00000080288.5	1240	3	-73	-6	-73	6	multi-exon	FALSE	canonical	2	7	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCAGTGAGTGGCTGT	2052	False	NA	NA	False	AATAAA	-20	NA	25000762	25003563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_25000900_25002297_25002923_25003006
Isoform_168591_3	chr7	+	4081	10	ISM	ENSMUSG00000045039.10	ENSMUST00000153077.2	5669	18	9090	3	9090	-3	3prime_fragment	FALSE	canonical	3	20	junction_4	7.54901677842801	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGCATCGTAACTT	NA	False	NA	5	True	AATAAA	-10	NA	25054495	25065336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
Isoform_168594_4	chr7	+	3369	6	ISM	ENSMUSG00000045039.10	ENSMUST00000153077.2	5669	18	12644	3	12644	-3	3prime_fragment	FALSE	canonical	3	29	junction_2	5.97996655509042	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGCATCGTAACTT	NA	False	NA	5	True	AATAAA	-10	NA	25058049	25065336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
Isoform_168596_119	chr7	+	1446	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	19	0	9	0	multi-exon	FALSE	canonical	3	84	junction_1	20.2938414303453	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1758	False	NA	39	True	NA	NA	NA	25318857	25324976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
Isoform_168597_10	chr7	+	1519	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	-54	0	-54	0	multi-exon	FALSE	canonical	3	84	junction_1	20.2938414303453	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1685	False	NA	39	True	NA	NA	NA	25318784	25324976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
Isoform_168600_3	chr7	+	2164	6	FSM	ENSMUSG00000057229.12	ENSMUST00000085953.5	2387	6	226	-3	226	0	multi-exon	FALSE	canonical	1	1	junction_1	50.2330568450697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	2044	False	NA	39	True	NA	NA	NA	25319143	25324976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_25319890_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
Isoform_168602_4	chr7	+	2877	5	NIC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	13	0	intron_retention	FALSE	canonical	3	96	junction_4	15.0332963783729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1762	False	NA	39	True	NA	NA	NA	25318861	25324976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
Isoform_168606_1833	chr7	+	982	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	38	0	-10	0	multi-exon	FALSE	canonical	3	1190	junction_2	58.9528625259198	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358626	25367457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
Isoform_168607_20	chr7	+	1064	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	-44	0	-44	0	multi-exon	FALSE	canonical	3	1190	junction_2	58.9528625259198	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358544	25367457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
Isoform_168609_58	chr7	+	2058	5	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1215	junction_4	52.4517635547176	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358626	25367457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_25358809_25362561_25363874_25364845_25364987_25365677_25365768_25367124
Isoform_168613_112	chr7	+	996	4	FSM	ENSMUSG00000063439.8	ENSMUST00000205658.2	995	4	0	-1	0	1	multi-exon	FALSE	canonical	3	77	junction_2	1.69967317119759	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTGCCTCCTTGTATCC	NA	False	NA	9	True	AATAAA	-20	NA	25380204	25385984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_25380404_25380807_25380900_25382715_25382842_25385405
Isoform_168615_9	chr7	+	2173	7	FSM	ENSMUSG00000002603.16	ENSMUST00000002678.10	2175	7	2	0	2	0	multi-exon	FALSE	canonical	3	17	junction_4	3.1446603773522	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGTCTCCGTGTCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	25386428	25404502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_25387649_25391801_25391963_25393647_25393766_25396342_25396421_25396549_25396698_25403549_25403704_25404208
Isoform_168616_5	chr7	+	578	2	NIC	ENSMUSG00000108415.2	novel	605	3	NA	NA	5	54	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTACTTATTCATGCAAT	NA	False	NA	NA	False	ACTAAA	-8	NA	25559569	25569362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_25559652_25568866
Isoform_168617_4	chr7	+	1613	9	FSM	ENSMUSG00000078787.10	ENSMUST00000108385.3	1631	9	17	1	17	-1	multi-exon	FALSE	canonical	1	2	junction_3	2.78107443266087	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAACTTTTATTTCTTG	NA	False	NA	NA	False	AATACA	-17	NA	26854523	26858092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_26854729_26855057_26855221_26855581_26855732_26855940_26856102_26856642_26856820_26856895_26857038_26857138_26857327_26857576_26857719_26857807
Isoform_168618_3	chr7	+	1505	7	FSM	ENSMUSG00000078786.10	ENSMUST00000179391.8	1748	7	82	161	82	-2	multi-exon	FALSE	canonical	2	9	junction_1	4.48763733927875	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACATTTTCAGTCCA	NA	False	NA	8	True	NA	NA	NA	26895287	26903584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_26895533_26896330_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
Isoform_168619_4	chr7	+	2885	6	ISM	ENSMUSG00000080533.3_ENSMUSG00000078786.10	ENSMUST00000179391.8	1748	7	1464	-1803	122	468	3prime_fragment	FALSE	canonical	2	9	junction_4	4.47213595499958	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCTAACTTCTCCATC	NA	False	NA	17	True	AATAAA	-19	NA	26896669	26905548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
Isoform_168620_238	chr7	+	2141	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	35	5	35	0	multi-exon	FALSE	canonical	3	74	junction_1	14.7544528041883	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	26932482	26957370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
Isoform_168622_20	chr7	+	2141	14	FSM	ENSMUSG00000003762.14	ENSMUST00000108378.10	2276	14	136	-1	-12	0	multi-exon	FALSE	canonical	3	76	junction_6	13.8260537867321	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	26932773	26957370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
Isoform_168626_194	chr7	+	2716	10	FSM	ENSMUSG00000063160.13	ENSMUST00000079258.7	2760	10	53	-9	-5	6	multi-exon	FALSE	canonical	3	70	junction_4	11.8415464455544	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAGGTGTGTGCATAC	NA	False	NA	18	True	AATAAA	-27	NA	26958202	26981575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
Isoform_168636_8	chr7	+	501	3	FSM	ENSMUSG00000040466.17	ENSMUST00000133750.8	509	3	5	3	-2	-3	multi-exon	FALSE	canonical	2	274	junction_1	60	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCACTGAGCACCAACT	NA	False	NA	6	True	ATTAAA	-19	NA	27147483	27159185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27147622_27158680_27158846_27158987
Isoform_168637_403	chr7	+	820	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	51	157	-3	3	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTCTCTCTGTCTGTG	NA	False	NA	49	True	NA	NA	NA	27147453	27165412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
Isoform_168639_12	chr7	+	924	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	-56	160	-56	0	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTCCTCTCTCTGTCT	NA	False	NA	46	True	AATAAA	-43	NA	27147346	27165409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
Isoform_168640_5	chr7	+	971	4	NIC	ENSMUSG00000040466.17	novel	1028	5	NA	NA	-13	2	intron_retention	FALSE	canonical	2	274	junction_1	76.027772703284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCCTCTCTCTGTCTGT	NA	False	NA	48	True	AATAAA	-45	NA	27147443	27165411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_27147622_27158680_27159078_27161991_27162121_27165144
Isoform_168641_136	chr7	+	1323	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	2	4	2	-4	multi-exon	FALSE	canonical	3	104	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGGAATTGTAATTAA	NA	False	NA	80	True	AATAAA	-12	NA	27173194	27176785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27173297_27175564
Isoform_168643_80	chr7	+	1182	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	43	8	43	-8	multi-exon	FALSE	canonical	3	24	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCAAGTGTGTGTGCTT	6632	False	NA	4	True	ATTAAA	-14	NA	27186377	27189733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27186504_27188677
Isoform_168644_11	chr7	+	1238	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	-13	8	-13	-8	multi-exon	FALSE	canonical	3	24	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCAAGTGTGTGTGCTT	6576	False	NA	4	True	ATTAAA	-14	NA	27186321	27189733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27186504_27188677
Isoform_168645_21	chr7	+	4661	7	FSM	ENSMUSG00000053198.15	ENSMUST00000098644.9	4841	7	1	179	1	1	multi-exon	FALSE	canonical	2	4	junction_1	15.3124858276578	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCATGTGTCTTGG	1762	False	NA	NA	False	AATAAA	-9	NA	27198749	27219460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27198791_27203957_27204002_27204089_27204189_27204304_27204432_27207371_27207529_27214675_27214873_27215464
Isoform_168646_5	chr7	+	5065	2	ISM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	18	6	18	1	intron_retention	FALSE	canonical	3	43	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCATGTGTCTTGG	NA	False	NA	NA	False	AATAAA	-9	NA	27207248	27219460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_27207529_27214675
Isoform_168647_96	chr7	+	4473	3	FSM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	24	0	24	0	multi-exon	FALSE	canonical	3	33	junction_2	5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	NA	False	NA	NA	False	AATAAA	-15	NA	27207254	27219466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27207529_27214675_27214873_27215464
Isoform_168648_7	chr7	+	1993	4	Fusion	ENSMUSG00000053198.15_ENSMUSG00000040424.16	novel	2926	3	NA	NA	2	3	multi-exon	FALSE	canonical	1	1	junction_1	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCTGCCTGTTACCACT	NA	False	NA	NA	False	AATAAA	-17	NA	27207232	27230603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_27207529_27227720_27228078_27228373_27229223_27230112
Isoform_168649_5	chr7	+	4229	2	ISM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	7415	0	7415	0	3prime_fragment	FALSE	canonical	3	33	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	NA	False	NA	NA	False	AATAAA	-15	NA	27214645	27219466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_27214873_27215464
Isoform_16865_151	chr11	-	3300	21	FSM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	-39	1431	-39	2	multi-exon	FALSE	canonical	3	130	junction_20	166.063624855054	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	8968	False	NA	-7	True	NA	NA	NA	102209961	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
Isoform_168650_9	chr7	+	2485	4	FSM	ENSMUSG00000040424.16	ENSMUST00000108353.9	2409	4	-73	-3	-73	3	multi-exon	FALSE	canonical	1	1	junction_1	2.62466929133727	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCTGCCTGTTACCACT	NA	False	NA	NA	False	AATAAA	-17	NA	27222618	27230603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27223407_27227720_27228078_27228373_27229223_27230112
Isoform_168651_770	chr7	+	2633	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	64	4	11	1	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTTTGTGTCTGTGT	460	False	NA	NA	False	AATAAA	-16	NA	27252721	27281520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
Isoform_168652_221	chr7	+	2682	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	17	2	17	-2	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTGTCTGTGTAT	413	False	NA	NA	False	AATAAA	-18	NA	27252674	27281522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
Isoform_16866_225	chr11	-	3126	21	FSM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	135	1431	135	2	multi-exon	FALSE	canonical	3	130	junction_20	166.063624855054	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9142	False	NA	-7	True	NA	NA	NA	102209787	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
Isoform_168660_21	chr7	+	2729	10	NIC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	17	-2	intron_retention	FALSE	canonical	3	32	junction_7	97.9850076715569	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTGTCTGTGTAT	413	False	NA	NA	False	AATAAA	-18	NA	27252674	27281522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271174_27274015_27274166_27278137_27278209_27279761
Isoform_168664_29	chr7	+	2044	4	FSM	ENSMUSG00000049643.16	ENSMUST00000186501.2	340	4	-27	-1677	-27	-2	multi-exon	FALSE	canonical	3	27	junction_1	145.525102836437	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTGTCTGTGTAT	7107	False	NA	NA	False	AATAAA	-18	NA	27273864	27281522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27273927_27274015_27274166_27278137_27278209_27279761
Isoform_168670_35	chr7	+	3887	13	ISM	ENSMUSG00000004056.16	ENSMUST00000167435.8	2865	15	-45	-1	-45	1	intron_retention	FALSE	canonical	3	377	junction_6	56.056704921594	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCAGTCCACATTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	27291125	27338876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516
Isoform_168673_1309	chr7	+	3021	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	150	1373	-44	0	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291126	27338878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
Isoform_168697_5	chr7	+	518	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	98	3996	98	-1579	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTACTTTTAGTGATG	NA	False	NA	11	True	AGTAAA	-15	NA	27388862	27401913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
Isoform_168699_3	chr7	+	6165	5	ISM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	172	3	172	-3	3prime_fragment	FALSE	canonical	3	19	junction_1	18.3762754659371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTGAGTGATCT	NA	False	NA	4	True	NA	NA	NA	27388936	27405906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
Isoform_168700_7	chr7	+	6129	5	ISM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	207	4	207	-4	3prime_fragment	FALSE	canonical	3	19	junction_1	18.3762754659371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTCTGAGTGATC	NA	False	NA	3	True	NA	NA	NA	27388971	27405905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
Isoform_168701_3	chr7	+	4434	4	FSM	ENSMUSG00000057093.15	ENSMUST00000076421.7	1947	4	-70	-2417	-45	0	multi-exon	FALSE	canonical	3	20	junction_2	19.1369334592098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27391856	27405909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27391960_27392906_27393034_27398077_27398177_27401804
Isoform_168704_12	chr7	+	4461	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	2	1433	2	-1433	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATATGTTT	NA	False	NA	NA	False	NA	NA	NA	27430815	27451694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
Isoform_168705_35	chr7	+	3878	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	1	2017	1	1224	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTGTCTGGCTCCAT	NA	False	NA	33	True	NA	NA	NA	27430814	27451110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
Isoform_168707_4	chr7	+	4031	5	FSM	ENSMUSG00000037640.16	ENSMUST00000042641.14	2727	5	-79	-1225	0	1225	multi-exon	FALSE	canonical	3	15	junction_1	62.997519792449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTGTCTGGCTCCATT	NA	False	NA	34	True	NA	NA	NA	27430856	27451111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27431090_27436360_27436414_27437727_27437855_27440381_27440481_27447592
Isoform_168708_5	chr7	+	3880	5	FSM	ENSMUSG00000037640.16	ENSMUST00000042641.14	2727	5	71	-1224	71	1224	multi-exon	FALSE	canonical	3	15	junction_1	62.997519792449	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTGTCTGGCTCCAT	NA	False	NA	33	True	NA	NA	NA	27431006	27451110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27431090_27436360_27436414_27437727_27437855_27440381_27440481_27447592
Isoform_16871_48	chr11	-	3364	21	FSM	ENSMUSG00000020923.18	ENSMUST00000173870.8	2936	21	65	-493	65	0	multi-exon	FALSE	canonical	3	106	junction_20	170.388167136101	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	8426	False	NA	-9	True	NA	NA	NA	102210503	102196818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
Isoform_168711_172	chr7	+	3761	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	12	-336	12	336	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTTTATTTTGCAT	420	False	NA	-1	True	NA	NA	NA	27538043	27556199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
Isoform_168712_3	chr7	+	3882	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	10	-455	10	455	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAATGGAGAAAAAAGA	418	False	NA	2	True	NA	NA	NA	27538041	27556318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
Isoform_168714_65	chr7	+	3801	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	-28	-336	-28	336	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTTTATTTTGCAT	380	False	NA	-1	True	NA	NA	NA	27538003	27556199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
Isoform_168717_4	chr7	+	3747	4	NIC	ENSMUSG00000078779.5	novel	3437	5	NA	NA	-29	334	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	78.4743411709982	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTGTTTATTTTGC	379	False	NA	-3	True	NA	NA	NA	27538002	27556197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_27538135_27543709_27543837_27545828_27545928_27552808
Isoform_168719_15	chr7	+	569	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	-27	2969	-27	-1711	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTTTTGATCTCAAGA	3300	False	NA	1	True	AATAAA	-10	NA	27559982	27577281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
Isoform_16872_195	chr11	-	3115	21	FSM	ENSMUSG00000020923.18	ENSMUST00000173870.8	2936	21	317	-496	317	3	multi-exon	FALSE	canonical	3	106	junction_20	170.388167136101	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	8678	False	NA	-6	True	NA	NA	NA	102210251	102196815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
Isoform_168720_30	chr7	+	3343	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	19	149	19	-149	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGACTGAGTGAGTGG	3346	False	NA	NA	False	NA	NA	NA	27560028	27580101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
Isoform_168723_6	chr7	+	1033	3	ISM	ENSMUSG00000078776.10	ENSMUST00000150948.2	7895	19	32565	-16	32565	0	3prime_fragment	FALSE	canonical	3	5	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTCTCCTGCTGTCT	1202	False	NA	NA	False	AATAAA	-15	NA	27861805	27864236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_27862400_27863693_27863966_27864069
Isoform_168724_2279	chr7	+	1183	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	14	0	2	0	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8545	False	NA	0	True	ATTAAA	-14	NA	27869148	27878694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
Isoform_168725_236	chr7	+	1208	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8520	False	NA	0	True	ATTAAA	-14	NA	27869123	27878694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
Isoform_168736_16	chr7	+	2529	11	FSM	ENSMUSG00000002409.19	ENSMUST00000085901.13	2534	11	5	0	5	0	multi-exon	FALSE	canonical	2	7	junction_5	4.15210789840534	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	NA	False	NA	NA	False	AGTAAA	-14	NA	27878898	27886719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885455_27885786_27885894_27885976
Isoform_168737_3	chr7	+	2415	12	NNC	ENSMUSG00000002409.19	novel	2534	11	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.32730375417586	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGCCTGAGCGTTT	NA	False	NA	NA	False	AGTAAA	-11	NA	27878925	27886716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
Isoform_168738_15	chr7	+	2429	11	FSM	ENSMUSG00000002409.19	ENSMUST00000172761.8	2018	11	-40	-371	-15	0	multi-exon	TRUE	canonical	0	0	junction_8	5.57135531087365	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	NA	False	NA	NA	False	AGTAAA	-14	NA	27878878	27886719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885258_27885455_27885786_27885894_27885976
Isoform_168743_8336	chr7	+	553	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	97	459	-14	0	multi-exon	FALSE	canonical	3	19383	junction_3	806.134294023024	8336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
Isoform_168744_2004	chr7	+	591	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	59	459	-52	0	multi-exon	FALSE	canonical	3	19383	junction_3	806.134294023024	2004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050135	28052121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
Isoform_168750_15	chr5	-	432	1	FSM	ENSMUSG00000060419.9	ENSMUST00000140155.2	441	1	66	-57	66	57	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	129205515	129205083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_129205100_129205500
Isoform_168756_409	chr7	+	1960	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	38	5	27	0	multi-exon	FALSE	canonical	3	164	junction_5	16.9726546514433	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTCCTAAAGTCTCT	607	False	NA	15	True	AATAAA	-16	NA	28092413	28098808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_168757_25	chr7	+	2101	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	38	-136	27	136	multi-exon	FALSE	canonical	3	164	junction_5	16.9726546514433	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTGTTTTTTTTG	607	False	NA	NA	False	AAGAAA	-22	NA	28092413	28098949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_168758_14	chr7	+	2036	13	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	27	0	intron_retention	FALSE	canonical	3	164	junction_5	17.6562469272367	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTCCTAAAGTCTCT	607	False	NA	15	True	AATAAA	-16	NA	28092413	28098808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_168759_7	chr7	+	2115	12	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	27	0	intron_retention	FALSE	canonical	3	164	junction_5	17.3228936563179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTCCTAAAGTCTCT	607	False	NA	15	True	AATAAA	-16	NA	28092413	28098808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_168760_10	chr7	+	2043	13	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	23	-1	intron_retention	FALSE	canonical	3	173	junction_4	15.3803626600791	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTAAAGTCTCTGTTC	603	False	NA	19	True	AATAAA	-20	NA	28092409	28098812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_168761_5	chr7	+	2051	13	FSM	ENSMUSG00000003437.15	ENSMUST00000122857.8	1997	13	-54	0	25	0	multi-exon	FALSE	canonical	3	164	junction_4	16.6205612286576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTCCTAAAGTCTCT	605	False	NA	15	True	AATAAA	-16	NA	28092411	28098808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_168762_147	chr7	+	625	7	FSM	ENSMUSG00000060791.16	ENSMUST00000108292.9	657	7	35	-3	-5	3	multi-exon	FALSE	canonical	3	339	junction_1	45.6070170039655	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTATCTGCAAAATCTG	1850	False	NA	NA	False	AATAAA	-29	NA	28136906	28145974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
Isoform_168763_11	chr7	+	726	7	FSM	ENSMUSG00000060791.16	ENSMUST00000108292.9	657	7	-56	-13	-56	13	multi-exon	FALSE	canonical	3	339	junction_1	45.6070170039655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAATCTGAGCCTCTTTG	1759	False	NA	NA	False	AATAAA	-39	NA	28136815	28145984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
Isoform_168764_3	chr7	+	770	7	NNC	ENSMUSG00000060791.16	novel	657	7	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	160.378372052538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATCTGCAAAATCT	1831	False	NA	NA	False	AATAAA	-28	NA	28136887	28145973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28137000_28140731_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
Isoform_168765_18	chr7	+	606	7	FSM	ENSMUSG00000060791.16	ENSMUST00000078845.13	637	7	34	-3	34	3	multi-exon	FALSE	canonical	3	32	junction_1	149.1011029097	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACGACATGGTATCTGCA	180	False	NA	NA	False	AATAAA	-22	NA	28140385	28145967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28140467_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
Isoform_168766_3	chr7	+	3747	4	FSM	ENSMUSG00000030600.16	ENSMUST00000190954.7	812	4	-98	-2837	-98	-10	multi-exon	FALSE	canonical	3	51	junction_1	7.54247233265651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATAATTACCTAACC	3880	False	NA	NA	False	AATAAA	-8	NA	28151306	28161547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28151470_28153921_28153955_28157383_28157439_28158051
Isoform_168768_43	chr7	+	3250	5	NIC	ENSMUSG00000030600.16	novel	812	4	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	6.68954408012983	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	3971	False	NA	27	True	ATTAAA	-31	NA	28151397	28167666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28151470_28153921_28153955_28157383_28157439_28158051_28159489_28166013
Isoform_168769_35	chr7	+	3337	5	NIC	ENSMUSG00000030600.16	novel	812	4	NA	NA	-94	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	6.68954408012983	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	3884	False	NA	27	True	ATTAAA	-31	NA	28151310	28167666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28151470_28153921_28153955_28157383_28157439_28158051_28159489_28166013
Isoform_168770_19	chr7	+	3436	5	NIC	ENSMUSG00000030600.16	novel	812	4	NA	NA	-193	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	6.68954408012983	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	3785	False	NA	27	True	ATTAAA	-31	NA	28151211	28167666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28151470_28153921_28153955_28157383_28157439_28158051_28159489_28166013
Isoform_168771_3	chr7	+	3349	5	NIC	ENSMUSG00000030600.16	novel	1852	5	NA	NA	17	-2	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	26.5706605111728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTGTGTGAGTGTGTG	4163	False	NA	26	True	ATTAAA	-30	NA	28151589	28167665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28151762_28153921_28153955_28157383_28157439_28158051_28159489_28166013
Isoform_168772_3	chr7	+	3425	5	NIC	ENSMUSG00000030600.16	novel	1852	5	NA	NA	-59	-2	combination_of_known_junctions	TRUE	canonical	1	5	junction_1	26.5706605111728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTGTGTGAGTGTGTG	4087	False	NA	26	True	ATTAAA	-30	NA	28151513	28167665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28151762_28153921_28153955_28157383_28157439_28158051_28159489_28166013
Isoform_168774_6	chr7	+	1199	6	NIC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-20	-3	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	19.975985582694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGGTTTTTTTTGTTTG	8825	False	NA	NA	False	GATAAA	-14	NA	28392253	28397383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397053
Isoform_168775_6	chr7	+	2018	6	NIC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-73	-1	combination_of_known_junctions	TRUE	canonical	3	31	junction_1	12.2637677734047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGTTCATATCTTTT	8772	False	NA	NA	False	AATAAA	-15	NA	28392200	28398759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
Isoform_168777_3	chr7	+	1906	6	NIC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	-25	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	21.4811545313561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAAACTGGTTCATATC	9010	False	NA	NA	False	AATAAA	-11	NA	28392438	28398755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28392528_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
Isoform_168778_5	chr7	+	1945	5	FSM	ENSMUSG00000037463.15	ENSMUST00000108281.8	1948	5	4	-1	4	1	multi-exon	FALSE	canonical	3	43	junction_1	9.31396800509858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTCATATCTTTTTC	9144	False	NA	NA	False	AATAAA	-17	NA	28392572	28398761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
Isoform_168779_6	chr7	+	1823	5	FSM	ENSMUSG00000037463.15	ENSMUST00000108281.8	1948	5	125	0	125	0	multi-exon	FALSE	canonical	3	43	junction_1	9.31396800509858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTTCATATCTTTTT	9265	False	NA	NA	False	AATAAA	-16	NA	28392693	28398760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
Isoform_16878_83	chr11	-	3126	19	FSM	ENSMUSG00000020923.18	ENSMUST00000107115.8	3199	19	6	67	6	2	multi-exon	FALSE	canonical	3	144	junction_13	159.309621666601	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9143	False	NA	-7	True	NA	NA	NA	102207524	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
Isoform_168780_8	chr7	+	3105	6	ISM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	-12	0	-12	0	intron_retention	FALSE	canonical	3	102	junction_3	18.2909813842779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416216	28437569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492
Isoform_168781_51	chr7	+	1973	7	FSM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	-20	5	-20	1	multi-exon	FALSE	canonical	3	89	junction_6	22.6838170411321	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTTTTTCAATTC	NA	False	NA	NA	False	NA	NA	NA	28416208	28437564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
Isoform_168783_60	chr7	+	1842	8	FSM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	-37	1	-9	-1	multi-exon	FALSE	canonical	3	49	junction_7	33.4310133418242	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTTTTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	28416219	28437562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
Isoform_168784_11	chr7	+	1907	8	FSM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	-101	0	-73	0	multi-exon	FALSE	canonical	3	49	junction_7	33.4310133418242	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416155	28437563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
Isoform_168785_28	chr7	+	1646	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	-89	6	-20	0	multi-exon	FALSE	canonical	3	40	junction_6	37.5340586075574	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416208	28437563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
Isoform_168788_11	chr7	+	2302	16	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-2	-18	intron_retention	TRUE	canonical	1	1	junction_2	77.3601677580624	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTCTGGATCCATGAG	266	False	NA	7	True	AATAAA	-15	NA	28441414	28453278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28441708_28443666_28443763_28443985_28444145_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
Isoform_168789_435	chr7	+	1864	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	-12	16	-2	-16	multi-exon	FALSE	canonical	3	180	junction_5	21.0516824347446	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTGGATCCATGAGCA	266	False	NA	9	True	AATAAA	-17	NA	28441414	28453280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
Isoform_16879_56	chr11	-	3186	19	FSM	ENSMUSG00000020923.18	ENSMUST00000107115.8	3199	19	-54	67	-53	2	multi-exon	FALSE	canonical	3	144	junction_13	159.309621666601	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9083	False	NA	-7	True	NA	NA	NA	102207584	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
Isoform_168790_42	chr7	+	3079	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	-12	-1199	-2	1199	multi-exon	FALSE	canonical	3	180	junction_5	21.0516824347446	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGCCATAAAAC	266	False	NA	NA	False	NA	NA	NA	28441414	28454495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
Isoform_168792_20	chr7	+	2157	15	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	180	junction_5	20.6265382852444	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCACAGGAAGTGCTGG	267	False	NA	22	True	AATAAA	-30	NA	28441415	28453293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
Isoform_168793_15	chr7	+	1765	17	NNC	ENSMUSG00000015149.15	novel	1843	16	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	34.8280934555712	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGACTTGTGTGGCCTC	NA	False	NA	11	True	ATTAAA	-20	NA	28466236	28488084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28466293_28467056_28467104_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341_28487683_28487714
Isoform_168794_20	chr7	+	1803	17	NNC	ENSMUSG00000015149.15	novel	1843	16	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	34.8280934555712	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTAACCATGACTTGTG	NA	False	NA	4	True	ATTAAA	-13	NA	28466191	28488077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28466293_28467056_28467104_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341_28487681_28487712
Isoform_168796_38	chr7	+	1720	16	NNC	ENSMUSG00000015149.15	novel	1843	16	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.6903513079115	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTGTGTGGCCTCTG	NA	False	NA	13	True	ATTAAA	-22	NA	28466236	28488086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341_28487681_28487712
Isoform_168797_8	chr7	+	1621	13	NNC	ENSMUSG00000015149.15	novel	1828	15	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	29.1485658118695	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTTGTGTGGCCTCT	8261	False	NA	12	True	ATTAAA	-21	NA	28476161	28488085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341_28487681_28487712
Isoform_168799_3	chr7	+	2884	13	NNC	ENSMUSG00000051735.8	novel	2898	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.1265096052169	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGGAGGTGCAGACCTG	NA	False	NA	10	True	AATAAA	-20	NA	28488398	28498386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28488431_28489702_28489837_28490015_28490176_28491661_28491765_28494246_28494320_28494402_28494468_28495082_28495230_28495315_28495772_28496077_28496372_28496534_28496667_28496984_28497149_28497234_28497558_28497585
Isoform_168800_104	chr7	+	2106	5	ISM	ENSMUSG00000051735.8	ENSMUST00000059857.8	2871	12	7017	-1	-952	1	3prime_fragment	FALSE	canonical	3	40	junction_1	3.11247489949718	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGGTGCAGACCTGTAA	NA	False	NA	13	True	AATAAA	-23	NA	28495410	28498389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_28495772_28496077_28496372_28496534_28496667_28496984_28497149_28497234
Isoform_168813_5940	chr7	+	2069	13	FSM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	48	25	1	1	multi-exon	FALSE	canonical	3	4757	junction_8	508.744178235868	5940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTATTTGCTGGG	NA	False	NA	8	True	AATAAA	-11	NA	28510362	28521666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
Isoform_168814_2092	chr7	+	2110	13	FSM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	7	25	7	1	multi-exon	FALSE	canonical	3	4757	junction_8	508.744178235868	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTATTTGCTGGG	NA	False	NA	8	True	AATAAA	-11	NA	28510321	28521666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
Isoform_16882_49	chr11	-	3371	20	FSM	ENSMUSG00000020923.18	ENSMUST00000107117.9	3258	20	-180	67	-180	2	multi-exon	FALSE	canonical	3	90	junction_19	213.309601634771	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9960	False	NA	-7	True	NA	NA	NA	102208877	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
Isoform_168822_466	chr7	+	2231	12	FSM	ENSMUSG00000015165.17	ENSMUST00000174477.8	2180	12	-50	-1	-3	1	multi-exon	FALSE	canonical	3	4757	junction_7	501.59715158615	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTATTTGCTGGG	NA	False	NA	8	True	AATAAA	-11	NA	28510311	28521666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
Isoform_168823_1229	chr7	+	2180	12	FSM	ENSMUSG00000015165.17	ENSMUST00000174477.8	2180	12	1	-1	1	1	multi-exon	FALSE	canonical	3	4757	junction_7	501.59715158615	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTATTTGCTGGG	NA	False	NA	8	True	AATAAA	-11	NA	28510362	28521666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
Isoform_168864_698	chr7	+	1183	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	85	-1	-47	1	multi-exon	TRUE	canonical	3	645	junction_5	36.3137901908447	698	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTTTACTGCAGT	NA	False	NA	15	True	AATAAA	-13	NA	28524726	28531673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
Isoform_168867_5	chr7	+	3040	21	FSM	ENSMUSG00000054083.9	ENSMUST00000066880.6	3040	21	22	-22	22	22	multi-exon	FALSE	canonical	0	0	junction_20	1.10792599030802	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGTCTTAAGTTTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	28580868	28593010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28581386_28581975_28582046_28582194_28582314_28582552_28582687_28585152_28585322_28585795_28585871_28585957_28586044_28586122_28586198_28586997_28587162_28587244_28587481_28587843_28587856_28588036_28588246_28588497_28588541_28588621_28588682_28589205_28589264_28589580_28589652_28589748_28589812_28590335_28590415_28592043_28592161_28592247_28592307_28592386
Isoform_168868_5	chr7	+	2718	33	NIC	ENSMUSG00000037337.12	novel	2720	32	NA	NA	53	-3	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	31.5981698194294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAATTCTCGGAGGAG	NA	False	NA	15	True	AATAAA	-20	NA	28681527	28702696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28681690_28682413_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_168869_205	chr7	+	2692	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	31	1	-2	1	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCGGAGGAGAGATTT	NA	False	NA	21	True	AATAAA	-26	NA	28682283	28702702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_168870_37	chr7	+	2760	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	-39	3	-39	1	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTCTCGGAGGAGAGAT	NA	False	NA	19	True	AATAAA	-24	NA	28682213	28702700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_168871_14	chr7	+	2869	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	-146	1	-146	1	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCGGAGGAGAGATTT	NA	False	NA	21	True	AATAAA	-26	NA	28682106	28702702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_168873_11	chr7	+	3459	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	-736	1	42	1	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCGGAGGAGAGATTT	NA	False	NA	21	True	AATAAA	-26	NA	28681516	28702702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_16888_33	chr11	-	3076	20	FSM	ENSMUSG00000020923.18	ENSMUST00000178839.8	4580	20	74	1430	74	2	multi-exon	FALSE	canonical	3	130	junction_19	207.277671834178	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9081	False	NA	-7	True	NA	NA	NA	102209848	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
Isoform_168882_4	chr7	+	496	6	NNC	ENSMUSG00000037337.12	novel	523	5	NA	NA	-194	1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	64.9966152964906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTCTCGGAGGAGAGAT	6768	False	NA	19	True	AATAAA	-24	NA	28700772	28702700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28700810_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_168883_4	chr7	+	689	5	FSM	ENSMUSG00000037337.12	ENSMUST00000208784.2	523	5	-166	0	-166	0	multi-exon	FALSE	canonical	3	158	junction_2	9.82344135219425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTCTCGGAGGAGAGA	6796	False	NA	18	True	AATAAA	-23	NA	28700800	28702699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_168884_3	chr7	+	1937	11	ISM	ENSMUSG00000030589.16	ENSMUST00000162946.8	2005	13	2695	-88	2555	88	intron_retention	FALSE	non_canonical	0	0	junction_2	17.2034880184223	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCTGGGTAGATTGTT	408	False	NA	NA	False	AAAACA	-10	NA	28837052	28848829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198
Isoform_168885_51	chr7	+	2024	16	ISM	ENSMUSG00000030589.16	ENSMUST00000032811.12	4621	17	2702	2340	2562	0	3prime_fragment	FALSE	non_canonical	0	0	junction_2	15.5905954558082	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	415	False	NA	20	True	AAAAAG	-19	NA	28837059	28851046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
Isoform_168886_3	chr7	+	2139	16	ISM	ENSMUSG00000030589.16	ENSMUST00000032811.12	4621	17	2585	2342	2445	0	3prime_fragment	TRUE	non_canonical	0	0	junction_2	15.5905954558082	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTGCCAGTCACACT	298	False	NA	18	True	AAAAAG	-17	NA	28836942	28851044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
Isoform_168887_26	chr7	+	2039	16	ISM	ENSMUSG00000030589.16	ENSMUST00000159975.8	2296	17	2702	0	2562	0	3prime_fragment	FALSE	non_canonical	0	0	junction_2	17.9245331567907	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	415	False	NA	20	True	AAAAAG	-19	NA	28837059	28851046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
Isoform_168888_4	chr7	+	2956	16	ISM	ENSMUSG00000030589.16	ENSMUST00000159975.8	2296	17	2707	-922	2567	1	3prime_fragment	FALSE	non_canonical	0	0	junction_2	17.9245331567907	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACGGTTCATAGTGTTGA	420	False	NA	NA	False	ACTAAA	-15	NA	28837064	28851968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
Isoform_168889_3	chr7	+	2688	15	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2562	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	15.1596941437026	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGACTGCCAGTCACAC	415	False	NA	17	True	AAAAAG	-16	NA	28837059	28851043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849261_28849346_28849482_28849603_28849717_28850870
Isoform_168890_3	chr7	+	3700	14	NIC	ENSMUSG00000030589.16	novel	4621	17	NA	NA	2562	2	intron_retention	FALSE	non_canonical	0	0	junction_2	15.6541769006828	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGGTTCATAGTGTTGAG	415	False	NA	NA	False	ACTAAA	-16	NA	28837059	28851969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
Isoform_168891_18	chr7	+	2774	14	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2562	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	15.6541769006828	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGACTGCCAGTCACAC	415	False	NA	17	True	AAAAAG	-16	NA	28837059	28851043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
Isoform_168892_4	chr7	+	2605	12	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2565	0	intron_retention	FALSE	canonical	3	10	junction_1	14.2915336435352	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	418	False	NA	20	True	AAAAAG	-19	NA	28837062	28851046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28837151_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
Isoform_168893_1073	chr7	+	1090	8	FSM	ENSMUSG00000030588.13	ENSMUST00000108238.8	1126	8	36	0	12	0	multi-exon	FALSE	canonical	3	755	junction_1	273.775194535329	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6073	False	NA	12	True	AATAAA	-15	NA	28937789	28946954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
Isoform_168895_23	chr7	+	934	7	NIC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	581.164826495509	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6073	False	NA	12	True	AATAAA	-15	NA	28937789	28946954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
Isoform_168897_636	chr7	+	1118	8	FSM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	488	junction_1	365.371993833067	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6054	False	NA	12	True	AATAAA	-15	NA	28937770	28946954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
Isoform_168901_43	chr7	+	1098	8	NIC	ENSMUSG00000030588.13	novel	1153	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	515.665569523346	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6192	False	NA	12	True	AATAAA	-15	NA	28937908	28946954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28937989_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
Isoform_168905_163	chr7	+	1114	8	NIC	ENSMUSG00000030588.13	novel	1153	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	482.335940174142	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6224	False	NA	12	True	AATAAA	-15	NA	28937940	28946954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_28938037_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
Isoform_16891_35	chr11	-	3003	20	NIC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	317	2	combination_of_known_junctions	FALSE	canonical	3	106	junction_19	210.872137020862	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	8678	False	NA	-7	True	NA	NA	NA	102210251	102196816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
Isoform_168911_41	chr7	+	544	4	FSM	ENSMUSG00000037166.6	ENSMUST00000048187.6	950	4	-4	410	0	-410	multi-exon	FALSE	canonical	3	93	junction_2	2.05480466765633	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCCGGATTTTCC	4003	False	NA	8	True	NA	NA	NA	28988732	28992816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_28988961_28990934_28991016_28991475_28991509_28992614
Isoform_168912_13	chr7	+	2341	12	FSM	ENSMUSG00000030584.15	ENSMUST00000108231.8	2040	12	20	-321	-5	1	multi-exon	FALSE	canonical	3	12	junction_10	19.1570283587301	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCTTCCATCTCTAAC	1784	False	NA	7	True	ATTAAA	-23	NA	29003395	29017010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015638_29015751_29015905
Isoform_168913_66	chr7	+	2314	12	FSM	ENSMUSG00000030584.15	ENSMUST00000049977.13	2309	12	-6	1	-6	-1	multi-exon	TRUE	canonical	3	46	junction_7	12.1008161735527	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTCCATCTCTAACCT	1783	False	NA	9	True	ATTAAA	-25	NA	29003394	29017012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_168915_3	chr7	+	2286	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	22.8989082709198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTCCATCTCTAACC	1789	False	NA	8	True	ATTAAA	-24	NA	29003400	29017011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015638_29015751_29015905
Isoform_168917_27	chr7	+	2262	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	17.2568826848884	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTCCATCTCTAACCT	1784	False	NA	9	True	ATTAAA	-25	NA	29003395	29017012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_168918_4	chr7	+	2222	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	21.9945447781944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTCCATCTCTAACC	1784	False	NA	8	True	ATTAAA	-24	NA	29003395	29017011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_168920_3	chr7	+	2271	12	NIC	ENSMUSG00000030584.15	novel	3135	12	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	21.6184035465348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCTTCCATCTCTAAC	5840	False	NA	7	True	ATTAAA	-23	NA	29007451	29017010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015638_29015751_29015905
Isoform_168921_6	chr7	+	2286	12	FSM	ENSMUSG00000030584.15	ENSMUST00000065181.12	1574	12	-31	-681	-31	0	multi-exon	FALSE	canonical	3	23	junction_1	16.304438375602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGCTTCCATCTCTAA	5794	False	NA	6	True	ATTAAA	-22	NA	29007405	29017009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_168922_6	chr7	+	1544	12	FSM	ENSMUSG00000030584.15	ENSMUST00000065181.12	1574	12	16	14	10	1	multi-exon	FALSE	canonical	3	23	junction_1	16.304438375602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGGGAAAAAAATTA	5841	False	NA	NA	False	AAAAAG	-13	NA	29007452	29016314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_168924_23	chr7	+	2209	12	FSM	ENSMUSG00000030584.15	ENSMUST00000065181.12	1574	12	49	-684	43	-1	multi-exon	FALSE	canonical	3	23	junction_1	16.304438375602	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTCCATCTCTAACCT	5874	False	NA	9	True	ATTAAA	-25	NA	29007485	29017012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_168926_47	chr7	+	2943	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	26	1144	26	-1144	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACACATTATATACAATA	NA	False	NA	NA	False	AATAAA	-20	NA	29468002	29478102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
Isoform_168927_8	chr7	+	5678	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	33	-1598	33	1598	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCCTCTCATGGTTTA	NA	False	NA	4	True	AATATA	-16	NA	29468009	29480844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
Isoform_168928_68	chr7	+	2219	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	26	1868	26	-1868	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTAATTCTATTACC	NA	False	NA	NA	False	NA	NA	NA	29468002	29477378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
Isoform_168930_43	chr7	+	3019	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	23	1071	23	-1071	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAGCTTTTTCCAAA	NA	False	NA	NA	False	AATAAA	-14	NA	29467999	29478175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
Isoform_168933_5	chr7	+	1593	4	FSM	ENSMUSG00000047473.15	ENSMUST00000126504.2	3707	4	-9	2123	-9	-2123	multi-exon	FALSE	canonical	1	3	junction_1	10.7806410858642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTATTTGTATGGTTGC	NA	False	NA	NA	False	AAGAAA	-11	NA	29483438	29489214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29484327_29485599_29485729_29487473_29487601_29488765
Isoform_168934_5	chr7	+	1536	4	NIC	ENSMUSG00000047473.15	novel	3707	4	NA	NA	0	-2127	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	6.97614984548545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTTTTATTTGTATGG	NA	False	NA	NA	False	AAGAAA	-7	NA	29483447	29489210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29484327_29485643_29485729_29487473_29487601_29488765
Isoform_168936_5	chr7	+	3538	5	NIC	ENSMUSG00000047473.15	novel	3558	5	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	7.96868872525461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATGTTAAACATGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	29483438	29494126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29484327_29485643_29485729_29487473_29487601_29488765_29488862_29491784
Isoform_168937_65	chr7	+	3455	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-15	-64	-10	-1	multi-exon	FALSE	canonical	3	32	junction_1	5.78791845139511	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTGAGTTAATTTCTT	NA	False	NA	NA	False	AAGAAA	-17	NA	29515528	29530429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
Isoform_168938_36	chr7	+	4517	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-43	-1098	-38	1033	multi-exon	FALSE	canonical	3	32	junction_1	5.78791845139511	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGATTTATTTTTAAAGAA	NA	False	NA	8	True	AATAAA	-21	NA	29515500	29531463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
Isoform_168941_3	chr7	+	3565	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-126	-63	-121	-2	multi-exon	TRUE	canonical	3	32	junction_1	5.78791845139511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTGAGTTAATTTCT	NA	False	NA	NA	False	AAGAAA	-16	NA	29515417	29530428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
Isoform_168943_12	chr7	+	3369	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	-14	1	-14	-1	multi-exon	FALSE	canonical	2	3	junction_1	16.6789538041209	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTGAGTTAATTTCTT	NA	False	NA	NA	False	AAGAAA	-17	NA	29515524	29530429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
Isoform_168944_3	chr7	+	3660	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	-29	-275	-29	275	multi-exon	FALSE	canonical	2	3	junction_1	16.6789538041209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAACTTGGAAGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	29515509	29530705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
Isoform_168946_10	chr7	+	2323	4	FSM	ENSMUSG00000058402.15	ENSMUST00000074876.13	2537	4	10	204	10	-204	multi-exon	FALSE	canonical	3	31	junction_2	4.02768199119819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGTTGCTGTGATATAGA	NA	False	NA	NA	False	ATTAAA	-13	NA	29559413	29575726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29559519_29560440_29560494_29572316_29572359_29573603
Isoform_168947_3	chr7	+	2858	4	FSM	ENSMUSG00000058402.15	ENSMUST00000074876.13	2537	4	-6	-315	-6	-7	multi-exon	FALSE	canonical	3	31	junction_2	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTTGAATGTGTAG	NA	False	NA	NA	False	GATAAA	-12	NA	29559397	29576245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29559519_29560440_29560494_29572316_29572359_29573603
Isoform_168950_3	chr7	+	2405	3	FSM	ENSMUSG00000058402.15	ENSMUST00000057652.7	2744	3	-31	370	-1	-48	multi-exon	FALSE	canonical	2	5	junction_1	17.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTAACATGTAAAAGCA	NA	False	NA	NA	False	AATATA	-25	NA	29559434	29575882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29559519_29572316_29572359_29573603
Isoform_168951_33	chr7	+	2581	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	32	1	32	-1	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAGTTTCATAATTTT	NA	False	NA	26	True	AATAAA	-23	NA	29607973	29616231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
Isoform_168953_17	chr7	+	1022	4	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	0	252	combination_of_known_junctions	FALSE	canonical	3	234	junction_3	16.0485374896143	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCATGTTTCTTTGGAA	NA	False	NA	NA	False	AAGAAA	-24	NA	29683379	29688929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473
Isoform_168955_15	chr7	+	4043	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-37	-6	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCAAAAAAGAAATTTG	NA	False	NA	NA	False	NA	NA	NA	29683342	29724530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
Isoform_168958_220	chr7	+	7180	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTCAAGACTCACTTTCT	NA	False	NA	18	True	AATAAA	-21	NA	29683381	29727706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
Isoform_168968_35	chr7	+	7150	10	NIC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	28	-2	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	59.6777353689417	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTCAAGACTCACTTTC	NA	False	NA	17	True	AATAAA	-20	NA	29683407	29727705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
Isoform_168971_9	chr7	+	7164	10	FSM	ENSMUSG00000074221.13	ENSMUST00000148442.8	4005	10	6	-3165	6	-6	multi-exon	FALSE	canonical	3	18	junction_2	68.6080296204101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTACGGTCAAGACTCAC	NA	False	NA	13	True	AATAAA	-16	NA	29683385	29727701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29683654_29684684_29684752_29687013_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
Isoform_168980_254	chr7	+	3612	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	393	1	2	-1	multi-exon	FALSE	canonical	3	89	junction_1	24	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTTGTTGTTTTCCTTT	NA	False	NA	12	True	NA	NA	NA	29794611	29807046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29794637_29798952_29799148_29803654
Isoform_168983_23	chr7	+	3719	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	284	3	-84	0	multi-exon	FALSE	canonical	3	89	junction_1	24	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCCTTTGTTGTTTTCCT	NA	False	NA	10	True	NA	NA	NA	29794502	29807044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29794637_29798952_29799148_29803654
Isoform_168987_3	chr7	+	2400	5	NIC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	1	256	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	10.5445483544816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGATTGTTACTATAT	5260	False	NA	NA	False	TATAAA	-11	NA	29821367	29834631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_29821502_29825192_29825267_29830097_29830253_29830956_29831050_29832687
Isoform_168988_9	chr7	+	2362	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	11	-256	11	256	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGATTGTTACTATAT	5270	False	NA	NA	False	TATAAA	-11	NA	29821377	29834631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
Isoform_168990_4	chr7	+	2152	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	-40	5	-40	-5	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATTTGAAAATGAA	5219	False	NA	NA	False	NA	NA	NA	29821326	29834370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
Isoform_168991_5	chr7	+	3913	6	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	12	1828	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	17.1883681598923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTAGTGTATGAGGT	5271	False	NA	NA	False	NA	NA	NA	29821378	29836203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687_29835507_29835526
Isoform_168996_4	chr7	+	3959	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	-14	-1828	-14	1828	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTAGTGTATGAGGT	5245	False	NA	NA	False	NA	NA	NA	29821352	29836203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
Isoform_168997_3	chr7	+	2321	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-18	189	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	11.4537111889553	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAACCGCAGCTCTGA	5241	False	NA	NA	False	AATAAA	-20	NA	29821348	29834564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832690
Isoform_168998_10	chr7	+	2347	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	1	262	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	11.4537111889553	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTACTATATGTTCTT	5288	False	NA	NA	False	TATAAA	-17	NA	29821395	29834637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832690
Isoform_169_2040	ERCC-00136	+	1024	1	FSM	ERCC-00136A	EF011063	1025	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2040	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00136_+_0_1000
Isoform_169000_3	chr7	+	5115	3	FSM	ENSMUSG00000066647.9	ENSMUST00000209028.2	5117	3	2	0	2	0	multi-exon	FALSE	canonical	3	26	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCACGCGTGTG	9191	False	NA	NA	False	NA	NA	NA	29869301	29881749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29869640_29875275_29875372_29877068
Isoform_169003_13	chr7	+	4853	3	FSM	ENSMUSG00000066647.9	ENSMUST00000209028.2	5117	3	264	0	264	0	multi-exon	FALSE	canonical	3	26	junction_2	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCACGCGTGTG	9453	False	NA	NA	False	NA	NA	NA	29869563	29881749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29869640_29875275_29875372_29877068
Isoform_169004_232	chr7	+	343	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	49	1	-1	-1	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTCCAGCCTGTGTG	5723	False	NA	23	True	AATAAA	-24	NA	29883617	29885454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
Isoform_169005_78	chr7	+	370	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	22	1	22	-1	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTCCAGCCTGTGTG	5696	False	NA	23	True	AATAAA	-24	NA	29883590	29885454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
Isoform_169006_18	chr7	+	437	4	FSM	ENSMUSG00000074218.4	ENSMUST00000208441.2	485	4	-1	49	-1	-1	multi-exon	FALSE	canonical	3	51	junction_1	502.814964861716	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTCCAGCCTGTGTG	5723	False	NA	23	True	AATAAA	-24	NA	29883617	29885454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29883765_29884509_29884597_29884699_29884785_29885336
Isoform_169009_219	chr7	+	815	7	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	152	junction_1	393.380823404271	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931350	29932812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_29931625_29931647_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
Isoform_169010_284	chr7	+	435	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	381	3	-3	0	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931753	29932812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
Isoform_169013_8	chr7	+	525	5	FSM	ENSMUSG00000019738.16	ENSMUST00000138118.8	435	5	-28	-62	-10	0	multi-exon	FALSE	canonical	3	1146	junction_4	46.6717259162333	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931746	29932812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_29931830_29931906_29931962_29932174_29932407_29932491_29932544_29932709
Isoform_169019_209	chr7	+	932	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	50	0	-10	0	multi-exon	FALSE	canonical	3	231	junction_5	88.8144132446981	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008191	30013729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
Isoform_169021_9	chr7	+	1249	7	NIC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_5	204.263446449813	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008201	30013728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30012897_30013024_30013343
Isoform_169022_184	chr7	+	1133	6	FSM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	-21	0	-10	0	multi-exon	FALSE	canonical	3	431	junction_1	28.3125413906982	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008191	30013728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30013343
Isoform_169024_5	chr7	+	1558	5	NIC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	431	junction_1	30.0124973969178	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTTGGATTTTTT	NA	False	NA	6	True	AATAAA	-13	NA	30008190	30013726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30008260_30008905_30009480_30011264_30011326_30011661_30012133_30013343
Isoform_169025_5	chr7	+	1055	5	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	12	junction_1	201.561870154055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008191	30013729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30008260_30009410_30009480_30011264_30011326_30011661_30012133_30013343
Isoform_169027_124	chr7	+	1315	8	FSM	ENSMUSG00000019737.15	ENSMUST00000054594.15	1355	8	38	2	-17	0	multi-exon	FALSE	canonical	3	130	junction_4	40.5593543401494	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTCTGAGAATATCAGTA	NA	False	NA	9	True	ATTAAA	-16	NA	30014278	30018469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
Isoform_169028_6	chr7	+	1391	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	13	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_5	74.7905920090303	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014253	30018470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016567_30017392_30017468_30018097_30018157_30018248
Isoform_169029_18	chr7	+	2217	7	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	12	0	intron_retention	FALSE	canonical	3	130	junction_4	40.3460723683924	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTCTGAGAATATCAGTA	NA	False	NA	9	True	ATTAAA	-16	NA	30014252	30018469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30017468_30018097_30018157_30018248
Isoform_169030_7	chr7	+	1099	7	FSM	ENSMUSG00000019737.15	ENSMUST00000176304.8	1006	7	-98	5	2	1	multi-exon	FALSE	canonical	3	23	junction_4	73.2385751423994	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTCTGAGAATATCA	NA	False	NA	6	True	ATTAAA	-13	NA	30014242	30018466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30017392_30017468_30018097_30018157_30018248
Isoform_169031_44	chr7	+	2273	6	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	-24	0	intron_retention	FALSE	canonical	3	156	junction_2	32.932658562588	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTCTGAGAATATCAGTA	NA	False	NA	9	True	ATTAAA	-16	NA	30014271	30018469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30017468_30018097_30018157_30018248
Isoform_169032_3	chr7	+	2472	5	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	27	0	intron_retention	FALSE	canonical	3	156	junction_2	33.5335652742144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGTCTGAGAATATC	NA	False	NA	5	True	ATTAAA	-12	NA	30014267	30018465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30014512_30014686_30014826_30015654_30017468_30018097_30018157_30018248
Isoform_169033_16	chr7	+	1276	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	69.7438461918516	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014253	30018470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30014512_30014686_30014826_30015719_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
Isoform_169034_5	chr7	+	2235	6	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	23	junction_2	79.8288168520616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGTCTGAGAATATCAG	NA	False	NA	7	True	ATTAAA	-14	NA	30014242	30018467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30014512_30014686_30014826_30015719_30015799_30015997_30017468_30018097_30018157_30018248
Isoform_169035_3	chr7	+	3097	5	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	175	junction_2	26.2428561707753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	11	True	ATTAAA	-18	NA	30014278	30018471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30014512_30014686_30015799_30015997_30017468_30018097_30018157_30018248
Isoform_169036_3	chr7	+	3309	4	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	21	0	intron_retention	FALSE	canonical	3	214	junction_3	15.8394724940223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGTCTGAGAATATCAG	NA	False	NA	7	True	ATTAAA	-14	NA	30014261	30018467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30014512_30014686_30017468_30018097_30018157_30018248
Isoform_169037_16	chr7	+	2013	12	FSM	ENSMUSG00000036931.16	ENSMUST00000108176.9	2014	12	1	0	1	0	multi-exon	FALSE	canonical	2	3	junction_1	5.20965410250706	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGGTGTCATTAAA	NA	False	NA	16	True	ATTAAA	-16	NA	30121157	30128171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30121260_30122827_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125447_30125540_30125690_30126492_30126610_30126850_30127016_30127558
Isoform_169038_4	chr7	+	2791	20	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	4100	-6	4100	6	3prime_fragment	FALSE	canonical	2	12	junction_1	14.2015566233535	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30163249	30186654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
Isoform_169039_15	chr7	+	2839	19	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	5616	-7	5616	7	3prime_fragment	FALSE	canonical	2	33	junction_1	11.515555769973	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTTCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	30164765	30186655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
Isoform_169042_7	chr7	+	2789	19	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5767	24	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	14.2837212013545	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGGATGCCCCAGTGG	NA	False	NA	NA	False	NA	NA	NA	30164916	30186672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_30165078_30165176_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
Isoform_169043_5	chr7	+	2942	19	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5617	27	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	14.2837212013545	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATGCCCCAGTGGGAG	NA	False	NA	NA	False	NA	NA	NA	30164766	30186675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_30165078_30165176_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
Isoform_169044_3	chr7	+	3934	18	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5580	28	intron_retention	FALSE	canonical	2	33	junction_1	11.5237080729627	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGCCCCAGTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	30164729	30186676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30165078_30165176_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
Isoform_169045_6	chr7	+	2937	18	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5616	6	intron_retention	FALSE	canonical	2	34	junction_4	10.9591882102815	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30164765	30186654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
Isoform_169046_4	chr7	+	2404	17	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	6260	10	6260	-10	3prime_fragment	FALSE	canonical	2	34	junction_3	11.1943065886191	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	30165409	30186638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
Isoform_169047_15	chr7	+	1281	3	FSM	ENSMUSG00000036854.15	ENSMUST00000123355.8	1298	3	18	-1	18	0	multi-exon	FALSE	canonical	3	18	junction_1	8.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	False	NA	9	True	AATAAA	-17	NA	30251966	30254865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30252153_30253686_30253810_30253893
Isoform_169049_17	chr7	+	840	8	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	193.245851659676	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTGGTTTCCTTCCA	NA	False	NA	34	True	AATAAA	-22	NA	30262737	30264788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_169051_6	chr7	+	823	8	FSM	ENSMUSG00000078765.12	ENSMUST00000163330.3	583	8	-2	-238	-2	1	multi-exon	FALSE	canonical	3	25	junction_1	197.894529732277	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTGGTTTCCTTCCA	NA	False	NA	34	True	AATAAA	-22	NA	30262729	30264788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30262775_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_169052_163	chr7	+	871	8	FSM	ENSMUSG00000078765.12	ENSMUST00000043273.16	884	8	11	2	2	1	multi-exon	FALSE	canonical	3	411	junction_1	81.3154602866678	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTGGTTTCCTTCCA	NA	False	NA	34	True	AATAAA	-22	NA	30262756	30264788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_169054_7	chr7	+	3012	10	FSM	ENSMUSG00000109378.2	ENSMUST00000167042.8	3007	10	-4	-1	-4	-1	multi-exon	FALSE	canonical	3	13	junction_8	228.074549215821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGCCTGTCCTCATTA	NA	False	NA	NA	False	AATAAA	-17	NA	30262764	30267384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
Isoform_169055_12	chr7	+	765	7	FSM	ENSMUSG00000078765.12	ENSMUST00000163654.8	781	7	14	2	0	1	multi-exon	FALSE	canonical	3	54	junction_6	203.636454387606	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTGTGGTTTCCTT	NA	False	NA	31	True	AATAAA	-19	NA	30262763	30264785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
Isoform_169056_7	chr7	+	1035	7	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	411	junction_1	82.4386977631797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262763	30264787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30264033_30264127_30264224_30264519
Isoform_169057_4	chr7	+	945	7	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	411	junction_1	86.2781355075935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGGTTTCCTTCCAC	NA	False	NA	35	True	AATAAA	-23	NA	30262754	30264789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_169058_3	chr7	+	4077	4	ISM	ENSMUSG00000036826.15_ENSMUSG00000078765.12	ENSMUST00000168555.8	883	6	-5	-2798	-2	0	intron_retention	FALSE	canonical	3	74	junction_1	268.761356349209	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGTCCTCATTAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	30262758	30267387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506
Isoform_169059_16	chr7	+	846	8	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	181.681713163321	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTGGTTTCCTTCCA	NA	False	NA	34	True	AATAAA	-22	NA	30262756	30264788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_169060_3	chr7	+	2996	10	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-10	2	intron_retention	FALSE	canonical	3	13	junction_8	253.541191530034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGTCCTCATTAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	30262758	30267387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
Isoform_169061_10	chr7	+	881	8	FSM	ENSMUSG00000078765.12	ENSMUST00000167361.8	860	8	-20	-1	0	0	multi-exon	FALSE	canonical	3	61	junction_1	185.966751472034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262754	30264787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_169062_3	chr7	+	3028	10	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	13	junction_8	255.353978471039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTGTCCTCATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	30262758	30267385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
Isoform_169063_3	chr7	+	1046	7	NIC	ENSMUSG00000078765.12	novel	860	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	61	junction_1	200.697464414033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGGTCTGTGGTTTCCT	NA	False	NA	30	True	AATAAA	-18	NA	30262758	30264784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30264033_30264127_30264224_30264519
Isoform_169065_4	chr7	+	1634	3	FSM	ENSMUSG00000078765.12	ENSMUST00000169962.2	568	3	-61	-1005	2	1	multi-exon	FALSE	canonical	3	637	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTGTGGTTTCCTT	NA	False	NA	31	True	AATAAA	-19	NA	30262756	30264785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30263045_30263354_30263422_30263506
Isoform_169066_3	chr7	+	1947	2	ISM	ENSMUSG00000078765.12	ENSMUST00000165524.9	582	6	-552	-179	1	-1	intron_retention	FALSE	canonical	3	651	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262751	30264783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_30263422_30263506
Isoform_169067_6	chr7	+	826	6	FSM	ENSMUSG00000078765.12	ENSMUST00000165524.9	582	6	-64	-180	-11	0	multi-exon	FALSE	canonical	3	472	junction_3	63.1905056159547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGGTCTGTGGTTTCCT	63	False	NA	30	True	AATAAA	-18	NA	30263239	30264784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_169068_14	chr7	+	1110	7	Fusion	ENSMUSG00000097320.9_ENSMUSG00000046056.16	novel	1276	6	NA	NA	11	1	multi-exon	FALSE	canonical	1	1	junction_4	6.02771377334171	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTGGCTCACTGTGCTT	537	False	NA	20	True	AATAAA	-22	NA	30429014	30455557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_30429280_30431838_30432187_30434128_30434194_30435240_30435388_30454233_30454306_30454426_30454472_30455389
Isoform_169069_37	chr7	+	457	6	FSM	ENSMUSG00000074199.8	ENSMUST00000098559.3	470	6	0	13	0	1	multi-exon	FALSE	canonical	3	54	junction_5	10.9105453575887	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCCTGAATCTGTGT	NA	False	NA	10	True	AATAAA	-15	NA	30487329	30490509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490344
Isoform_169070_7	chr7	+	404	6	FSM	ENSMUSG00000074199.8	ENSMUST00000190990.7	403	6	0	-1	0	1	multi-exon	FALSE	canonical	3	20	junction_5	24.1694021440333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCCTGAATCTGTGT	NA	False	NA	10	True	AATAAA	-15	NA	30487329	30490509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490397
Isoform_169074_9	chr7	+	4129	3	NNC	ENSMUSG00000085105.3	novel	4175	2	NA	NA	23	1	intron_retention	FALSE	non_canonical	1	4	junction_2	20.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	33933824	33939633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_33933921_33935576_33939468_33939491
Isoform_169076_899	chr7	+	1850	15	FSM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	30	1	30	0	multi-exon	FALSE	canonical	3	282	junction_1	31.3925930429327	899	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTGCCCATCTTCCT	NA	False	NA	13	True	AATAAA	-18	NA	34611833	34744132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
Isoform_169083_170	chr7	+	3359	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	146	3	-14	1	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTTTTTTCTTTTGC	NA	False	NA	23	True	AATAAA	-23	NA	35033740	35091711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
Isoform_169085_24	chr7	+	3462	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	43	3	43	1	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTTTTTTCTTTTGC	NA	False	NA	23	True	AATAAA	-23	NA	35033637	35091711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
Isoform_169086_8	chr7	+	3495	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	9	4	9	0	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	NA	False	NA	22	True	AATAAA	-22	NA	35033603	35091710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
Isoform_16909_3	chr11	-	2128	4	ISM	ENSMUSG00000006574.16	ENSMUST00000006749.10	4545	20	12606	-4	7894	4	3prime_fragment	FALSE	canonical	0	0	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGCTTGAAGTCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	102243500	102239645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_102241194_102241927_102242102_102242182_102242353_102243264
Isoform_169093_50	chr7	+	2504	17	ISM	ENSMUSG00000023072.15	ENSMUST00000141704.8	2825	20	43	8234	23	-2121	5prime_fragment	FALSE	canonical	2	50	junction_16	33.5018073206506	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGATATTGTCTGTACTCA	NA	False	NA	11	True	AATAAA	-17	NA	35096502	35129878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
Isoform_169094_221	chr7	+	2600	19	FSM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	8	2	8	0	multi-exon	FALSE	canonical	2	65	junction_12	24.7032386540712	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	8	True	AATAAA	-18	NA	35096487	35138112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
Isoform_169097_8	chr7	+	2027	16	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	9	1131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	39.9731020673764	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTAAGACTATCTTTTT	NA	False	NA	NA	False	TATAAA	-23	NA	35096488	35128770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581
Isoform_169098_68	chr7	+	2528	17	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	5	-2116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	44.1628732647685	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTGTACTCAGTGTC	NA	False	NA	16	True	AATAAA	-22	NA	35096484	35129883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
Isoform_169100_166	chr7	+	2597	19	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	36.9808091706169	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	8	True	AATAAA	-18	NA	35096491	35138112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
Isoform_169109_9	chr7	+	2395	12	FSM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	31	-500	4	500	multi-exon	FALSE	canonical	3	240	junction_4	23.6388110621019	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGTGTGTGTGTGTGCG	NA	False	NA	NA	False	AATAAA	-24	NA	35285705	35309039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
Isoform_169112_548	chr7	+	4276	29	FSM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	7	1	1	-1	multi-exon	FALSE	canonical	3	207	junction_17	26.9819242214835	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285675	35338650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
Isoform_169113_44	chr7	+	4197	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_20	54.7169546878799	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285709	35338650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
Isoform_169123_3	chr7	+	2814	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178207.10	3340	3	-446	972	-446	4	multi-exon	FALSE	canonical	0	0	junction_1	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATATCTTTCTGTTTGT	NA	False	NA	13	True	TTTAAA	-9	NA	37882195	37896020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_37882947_37888030_37888202_37894128
Isoform_169124_128	chr7	+	2127	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	179	976	-16	0	multi-exon	FALSE	canonical	3	43	junction_1	1.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTCATATCTTTCTGT	NA	False	NA	9	True	TTTAAA	-5	NA	37883256	37896016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_37883325_37888030_37888202_37894128
Isoform_169125_14	chr7	+	3129	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	146	7	-49	-7	multi-exon	FALSE	canonical	3	43	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAGTCACTCTCTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	37883223	37896985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_37883325_37888030_37888202_37894128
Isoform_169128_6	chr7	+	5243	7	NNC	ENSMUSG00000108621.2	novel	208	2	NA	NA	28	4555	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.5342906696074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	19	True	AATAAA	-22	NA	39193853	39219189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_39193929_39194422_39194505_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
Isoform_169129_41	chr7	+	5219	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	-23	10825	-22	4554	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGGAGGTTCTGTTTT	NA	False	NA	18	True	AATAAA	-21	NA	39201901	39219188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
Isoform_169134_9	chr7	+	5198	6	NNC	ENSMUSG00000108621.2	novel	16021	6	NA	NA	3	4555	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	21.303520835768	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	19	True	AATAAA	-22	NA	39201927	39219189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_39202036_39202647_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
Isoform_169136_43	chr7	+	4113	7	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	76.9518247563587	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248674	41277957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
Isoform_169138_245	chr7	+	3942	7	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	79.7191249882291	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248721	41277957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676_41277106_41277130
Isoform_169140_6	chr7	+	4281	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	-3	-274	-3	274	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGCATAAGTGATGTGAT	NA	False	NA	NA	False	NA	NA	NA	41248681	41278231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
Isoform_169142_4	chr7	+	4418	6	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	0	-6	intron_retention	FALSE	non_canonical	0	0	junction_5	87.1242790501017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACCTTGGGGTAATGA	NA	False	NA	39	True	AATAAA	-21	NA	41248684	41277951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_41248825_41261099_41261922_41262579_41262676_41274146_41274257_41274676_41277106_41277130
Isoform_169144_3	chr7	+	3141	6	FSM	ENSMUSG00000074165.11	ENSMUST00000100275.10	3177	6	38	-2	5	2	multi-exon	FALSE	canonical	3	5	junction_2	15.7733953225043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41282992	41300304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_41283119_41284103_41284135_41292756_41292857_41296906_41297042_41297242_41297304_41297616
Isoform_169145_3	chr7	+	3124	5	NIC	ENSMUSG00000074165.11	novel	3177	6	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	14.5344418537486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41282978	41300304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_41283119_41292756_41292857_41296906_41297042_41297242_41297304_41297616
Isoform_169146_8	chr7	+	3038	4	FSM	ENSMUSG00000074165.11	ENSMUST00000045720.14	3058	4	-30	50	3	3	multi-exon	FALSE	canonical	3	13	junction_1	14.6363322667334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGTGAAAATTTTGGA	NA	False	NA	3	True	TATAAA	-16	NA	41282957	41300305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_41283119_41296914_41297042_41297242_41297304_41297616
Isoform_169147_6	chr7	+	3647	4	FSM	ENSMUSG00000074165.11	ENSMUST00000045720.14	3058	4	6	-595	6	-4	multi-exon	FALSE	canonical	3	13	junction_1	14.6363322667334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAAGTGTTCACTTTG	NA	False	NA	NA	False	NA	NA	NA	41282993	41300950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_41283119_41296914_41297042_41297242_41297304_41297616
Isoform_169149_10	chr7	+	3923	4	Fusion	ENSMUSG00000107181.2_ENSMUSG00000071952.4	novel	378	4	NA	NA	-20	1070	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCCTATTCCCACAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	42727454	42750337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
Isoform_169155_4	chr7	+	5540	3	Fusion	ENSMUSG00000107181.2_ENSMUSG00000071952.4	novel	378	4	NA	NA	-14	2820	multi-exon	FALSE	canonical	3	9	junction_1	45.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTTCTTCTATTGC	NA	False	NA	10	True	NA	NA	NA	42727460	42752087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_42727598_42742038_42742100_42746745
Isoform_169158_4	chr7	+	555	4	ISM	ENSMUSG00000064194.11	ENSMUST00000200973.4	578	5	-40	214	-5	-214	5prime_fragment	FALSE	canonical	3	27	junction_3	183.238157113147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATCATTGCAGGCACAAA	NA	False	NA	NA	False	NA	NA	NA	42827006	42838712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838466
Isoform_169160_10	chr7	+	3136	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	-6	-18	-6	18	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTCCTCATTTACAT	NA	False	NA	NA	False	AATATA	-11	NA	42827005	42841551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
Isoform_169161_66	chr7	+	2945	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	6	161	6	-161	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGTCCCAGTGCAT	NA	False	NA	23	True	AATAAA	-31	NA	42827017	42841372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
Isoform_169163_3	chr7	+	3931	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	-6	-813	-6	813	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTGTGTAAATGTACCA	NA	False	NA	NA	False	NA	NA	NA	42827005	42842346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
Isoform_169166_69	chr7	+	1880	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-6	-446	-6	446	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGGGACACTCTTTGT	9992	False	NA	11	True	AATAAA	-13	NA	42863456	42876712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
Isoform_169170_9	chr7	+	4369	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-12	-2929	-12	2929	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTACTGAAAATTCTGGT	9986	False	NA	NA	False	NA	NA	NA	42863450	42879195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
Isoform_169172_3	chr7	+	721	3	NNC	ENSMUSG00000074887.5	novel	1386	3	NA	NA	-5	14080	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATCTGTATTATTTGAG	9993	False	NA	-67	True	NA	NA	NA	42863457	42890346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_42863572_42884606_42884794_42889926
Isoform_169173_3	chr7	+	790	3	NNC	ENSMUSG00000074887.5	novel	1386	3	NA	NA	-6	14148	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGTGTGCATTTGGCC	9992	False	NA	1	True	NA	NA	NA	42863456	42890414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_42863572_42884606_42884794_42889926
Isoform_169174_3	chr7	+	3345	3	NNC	ENSMUSG00000074887.5	novel	1386	3	NA	NA	-8	16701	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACAGGTATGCCTCAAA	9990	False	NA	NA	False	AATAAA	-18	NA	42863454	42892967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_42863572_42884606_42884794_42889926
Isoform_169175_3	chr7	+	616	2	NNC	ENSMUSG00000074887.5	novel	1386	3	NA	NA	-10	25694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAATAATTACTTTGG	9988	False	NA	NA	False	NA	NA	NA	42863452	42901960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_42863572_42901463
Isoform_169176_11	chr7	+	1577	2	FSM	ENSMUSG00000118553.2	ENSMUST00000239023.2	558	2	-16	-1003	-16	1003	multi-exon	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTGTGTGGGTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	43077093	43079259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43077145_43077733
Isoform_169181_1743	chr7	+	826	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	47	20	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	117.194539121923	1743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGCCTCTTTCCTCA	1955	False	NA	32	True	AATAAA	-15	NA	43093553	43107204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
Isoform_169189_4	chr7	+	3515	5	FSM	ENSMUSG00000056592.15	ENSMUST00000107972.8	3495	5	-24	4	-24	-4	multi-exon	FALSE	canonical	1	5	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTTTATTGTACATTAT	NA	False	NA	NA	False	NA	NA	NA	43211655	43224881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43211846_43214037_43214268_43216691_43216819_43217068_43217168_43222012
Isoform_169191_20	chr7	+	3195	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	113	1186	84	-1186	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGGCTGGATAGTAA	7380	False	NA	1	True	NA	NA	NA	43229146	43241473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
Isoform_169193_9	chr7	+	3309	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	0	1185	0	-1185	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGCTGGATAGTAAT	7267	False	NA	2	True	NA	NA	NA	43229033	43241474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
Isoform_169196_25	chr7	+	2403	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-43	2	13	-2	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCCACATTCATCCATT	2849	False	NA	5	True	AATAAA	-19	NA	43256605	43267707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_169197_37	chr7	+	2331	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-42	73	14	-4	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGCTTATTTTAAAT	2850	False	NA	3	True	AATAAA	-11	NA	43256606	43267636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_169199_7	chr7	+	2436	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-77	3	-21	-3	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCCACATTCATCCAT	2815	False	NA	4	True	AATAAA	-18	NA	43256571	43267706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_1692_17	chr10	-	6843	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-155	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCAGTTCCTTTATGAG	NA	False	NA	-2	True	AATAAA	-25	NA	14421078	14278326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
Isoform_169200_5	chr7	+	3244	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-42	-840	14	840	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAAGTCTCTCTGTAGTT	2850	False	NA	NA	False	CATAAA	-22	NA	43256606	43268549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_169202_7	chr7	+	2228	4	FSM	ENSMUSG00000055102.16	ENSMUST00000120935.2	2156	4	-6	-66	-6	-3	multi-exon	FALSE	canonical	2	5	junction_1	36.4630711207319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCCACATTCATCCAT	2830	False	NA	4	True	AATAAA	-18	NA	43256586	43267706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43256699_43261406_43261534_43261970_43262064_43265810
Isoform_169203_32	chr7	+	2401	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATACCCACATTCATCCA	2892	False	NA	3	True	AATAAA	-17	NA	43256648	43267705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_169204_51	chr7	+	2346	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGCTTATTTTAAAT	2878	False	NA	3	True	AATAAA	-11	NA	43256634	43267636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_169205_3	chr7	+	2182	4	NIC	ENSMUSG00000055102.16	novel	2156	4	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	35.6121078036982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGCTTATTTTAAAT	2849	False	NA	3	True	AATAAA	-11	NA	43256605	43267636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43256742_43261406_43261534_43261970_43262064_43265810
Isoform_169207_293	chr7	+	2472	3	FSM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	1	2	1	-2	multi-exon	FALSE	canonical	3	64	junction_1	1	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTTTTTGGTCTGGTG	NA	False	NA	6	True	NA	NA	NA	43321440	43327720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43321500_43324527_43325071_43325850
Isoform_169211_3	chr7	+	1098	6	FSM	ENSMUSG00000054046.8	ENSMUST00000066834.8	1809	6	-69	780	-69	-780	multi-exon	FALSE	canonical	2	4	junction_1	24.8161237907938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCCCTACTGTGCCTC	NA	False	NA	8	True	AATAAA	-21	NA	43361921	43376178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43362129_43363215_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
Isoform_169212_37	chr7	+	1339	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	33	1	33	-1	multi-exon	FALSE	canonical	2	31	junction_4	14.5134420452214	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCAATGTGTGTGCCTC	388	False	NA	8	True	ATTAAA	-15	NA	43430491	43434833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
Isoform_169213_10	chr7	+	1393	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	-20	0	-20	0	multi-exon	FALSE	canonical	2	31	junction_4	14.5134420452214	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAATGTGTGTGCCTCT	335	False	NA	9	True	ATTAAA	-16	NA	43430438	43434834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
Isoform_169215_20	chr7	+	855	5	FSM	ENSMUSG00000064023.5	ENSMUST00000085461.4	1322	5	467	0	448	0	multi-exon	FALSE	canonical	3	33	junction_4	3.90512483795333	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGACTGTGCTTTGACC	3344	False	NA	28	True	AATAAA	-18	NA	43447467	43453246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43447557_43448047_43448208_43448488_43448752_43451503_43451638_43453037
Isoform_169216_41	chr7	+	866	5	FSM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	83	5	0	-5	multi-exon	FALSE	canonical	3	34	junction_1	17.0934929139717	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTCAAGTTCTGACA	NA	False	NA	2	True	AATAAA	-16	NA	43874866	43879037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334_43878472_43878837
Isoform_169217_5	chr7	+	1014	5	FSM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	-61	1	-61	-1	multi-exon	FALSE	canonical	3	34	junction_1	17.0934929139717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAAGTTCTGACATTCT	NA	False	NA	6	True	AATAAA	-20	NA	43874722	43879041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334_43878472_43878837
Isoform_169218_125	chr7	+	2226	8	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	337.565594532744	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43896233_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169222_84	chr7	+	2076	7	FSM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	53	2	1	0	multi-exon	FALSE	canonical	3	44	junction_1	296.487211641019	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43896233_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169223_25	chr7	+	2169	7	NNC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	324.736303278008	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_43896233_43896661_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169225_76	chr7	+	2215	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	340.047415661344	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTGTGCTGTTTGATT	NA	False	NA	21	True	ATTAAA	-21	NA	43896210	43901740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43896233_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169227_86	chr7	+	2064	7	FSM	ENSMUSG00000045411.17	ENSMUST00000185481.7	759	7	33	-1338	0	0	multi-exon	FALSE	canonical	3	30	junction_1	300.418411922808	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43896233_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169231_27	chr7	+	2048	7	FSM	ENSMUSG00000045411.17	ENSMUST00000187524.7	676	7	-12	-1360	0	0	multi-exon	FALSE	canonical	0	0	junction_2	348.685826433418	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43896233_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169232_137	chr7	+	1897	6	FSM	ENSMUSG00000045411.17	ENSMUST00000137702.8	784	6	60	-1173	1	0	multi-exon	FALSE	canonical	3	108	junction_1	258.311904487579	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43896233_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169234_175	chr7	+	2241	8	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	327.388554024301	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43896248_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169237_158	chr7	+	2095	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	1	-4	1	0	multi-exon	FALSE	canonical	3	105	junction_1	279.849612391291	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896211	43901743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169240_102	chr7	+	2228	8	FSM	ENSMUSG00000045411.17	ENSMUST00000146155.8	988	8	1	-1241	1	0	multi-exon	FALSE	canonical	0	0	junction_3	335.825391948779	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43896248_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169242_85	chr7	+	2079	7	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	293.703743402921	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43896248_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169246_51	chr7	+	2062	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	349.374997515404	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43896248_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169250_485	chr7	+	1912	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	66	4	1	0	multi-exon	FALSE	canonical	3	217	junction_1	215.342889364845	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169251_44	chr7	+	2000	6	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	300.883100223326	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_43896248_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169260_54	chr7	+	3148	6	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	301.065707113912	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169265_244	chr7	+	3342	5	FSM	ENSMUSG00000045411.17	ENSMUST00000107950.9	3336	5	-1	-5	1	0	multi-exon	FALSE	canonical	3	709	junction_3	44.6933999601731	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896211	43901741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169274_28	chr7	+	4860	3	FSM	ENSMUSG00000045411.17	ENSMUST00000071296.11	4201	3	-654	-5	1	0	multi-exon	FALSE	canonical	3	709	junction_2	56.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896211	43901741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_43899024_43899444_43899484_43899732
Isoform_169276_35	chr7	+	4586	4	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	709	junction_2	50.8745734352852	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_169279_5	chr7	+	2522	11	FSM	ENSMUSG00000030731.14	ENSMUST00000118831.8	2627	11	-52	157	0	1	multi-exon	FALSE	canonical	0	0	junction_2	6.15142259969188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTCTCCCTGGGG	NA	False	NA	17	True	AATAAA	-19	NA	44033525	44049454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44033601_44034229_44034374_44035352_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
Isoform_169280_4	chr7	+	2476	11	NIC	ENSMUSG00000030731.14	novel	2494	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	5.91692487699481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTCTCCCTGGGG	NA	False	NA	17	True	AATAAA	-19	NA	44033549	44049454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44033601_44034229_44034374_44035374_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
Isoform_169281_28	chr7	+	2487	11	FSM	ENSMUSG00000030731.14	ENSMUST00000118962.8	2494	11	8	-1	8	1	multi-exon	FALSE	canonical	2	9	junction_1	3.88458491991101	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTCTCCCTGGGG	NA	False	NA	17	True	AATAAA	-19	NA	44033533	44049454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44033601_44034229_44034374_44035379_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
Isoform_169284_3	chr7	+	912	6	NIC	ENSMUSG00000038695.14	novel	922	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	25.8580741742304	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGGGCTCAGCTC	4821	False	NA	24	True	AATAAA	-16	NA	44117482	44121076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44117615_44117783_44117842_44118230_44118394_44119835_44119962_44120536_44120732_44120838
Isoform_169287_11	chr7	+	1365	9	FSM	ENSMUSG00000002204.10	ENSMUST00000002274.10	1560	9	176	19	124	-19	multi-exon	FALSE	canonical	1	2	junction_5	2.82842712474619	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAATTAAAAAAAAAAAT	2718	False	NA	NA	False	NA	NA	NA	44221979	44236267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44222114_44230627_44230764_44230844_44230969_44231106_44231226_44231765_44231966_44234422_44234546_44234642_44234788_44235137_44235237_44235982
Isoform_169288_7	chr7	+	2645	2	ISM	ENSMUSG00000062785.15	ENSMUST00000209177.2	2960	6	233	4137	11	1172	5prime_fragment	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAAAAGAAAT	4124	False	NA	NA	False	NA	NA	NA	44240320	44246367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_44241183_44244584
Isoform_169290_4	chr7	+	2909	6	NIC	ENSMUSG00000062785.15	novel	2960	6	NA	NA	27	104	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	2.78567765543682	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACCTCAGGTCTCCATG	4140	False	NA	NA	False	NA	NA	NA	44240336	44251669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44241183_44244584_44245693_44247804_44248000_44248229_44248358_44250097_44250353_44251292
Isoform_169292_138	chr7	+	1754	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	213	2	-10	-2	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGGAGAGTTCAGTGT	NA	False	NA	14	True	AATAAA	-14	NA	44398049	44426937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
Isoform_169294_4	chr7	+	2480	15	NIC	ENSMUSG00000002205.17	novel	1969	15	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	39.2436788098493	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGGAGAGTTCAGTGT	NA	False	NA	14	True	AATAAA	-14	NA	44398069	44426937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44398822_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
Isoform_1693_14	chr10	-	5240	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	209	260	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421194	14280045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
Isoform_16930_3692	chr11	-	1492	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	36	157	0	3	multi-exon	TRUE	canonical	3	4398	junction_3	174.765959202208	3692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTGTAGTGTCTTG	7724	False	NA	98	True	NA	NA	NA	102298334	102293967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
Isoform_169300_1600	chr7	+	2478	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	242	2	30	1	multi-exon	FALSE	canonical	3	986	junction_1	0	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCTGTGAGTATGGGT	317	False	NA	19	True	AATAAA	-19	NA	44465753	44480234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44465908_44477910
Isoform_169301_2111	chr7	+	2403	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	312	7	17	1	multi-exon	FALSE	canonical	3	986	junction_1	0	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGACTTGCTGTGAGTA	387	False	NA	14	True	AATAAA	-14	NA	44465823	44480229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44465908_44477910
Isoform_169303_491	chr7	+	2560	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	162	0	-50	0	multi-exon	FALSE	canonical	3	986	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTGAGTATGGGTAG	237	False	NA	21	True	AATAAA	-21	NA	44465673	44480236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44465908_44477910
Isoform_169304_68	chr7	+	3432	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	312	-1022	17	1022	multi-exon	FALSE	canonical	3	986	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTCAGGATTGTA	387	False	NA	15	True	AATAAA	-17	NA	44465823	44481258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44465908_44477910
Isoform_169310_68	chr7	+	2713	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	2	7	2	1	multi-exon	FALSE	canonical	3	986	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGACTTGCTGTGAGTA	77	False	NA	14	True	AATAAA	-14	NA	44465513	44480229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44465908_44477910
Isoform_169315_9	chr7	+	2105	4	ISM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	-39	9	-39	4	intron_retention	FALSE	canonical	3	159	junction_1	71.5370921659216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGAGTTCGTGTTGTGTG	1361	False	NA	10	True	ATTAAA	-15	NA	44498608	44504836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362
Isoform_169316_315	chr7	+	1586	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	3	3	3	1	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	1403	False	NA	16	True	ATTAAA	-21	NA	44498650	44504842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_169317_96	chr7	+	1704	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	-115	3	-115	1	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	1285	False	NA	16	True	ATTAAA	-21	NA	44498532	44504842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_169318_19	chr7	+	1797	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107885.8	1812	5	26	-11	26	2	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGTTGTGTGTGAGTGT	1193	False	NA	17	True	ATTAAA	-22	NA	44498440	44504843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_169324_12	chr7	+	1943	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	-104	-679	-56	-2	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCGTGTTGTGTGTGA	1701	False	NA	13	True	ATTAAA	-18	NA	44498948	44504839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_169325_250	chr7	+	1477	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	361	-678	-17	-3	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCGTGTTGTGTGTG	2166	False	NA	12	True	ATTAAA	-17	NA	44499413	44504838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_169326_8	chr7	+	2342	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	-507	-675	-102	3	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGAGTTCGTGTTGTGT	1298	False	NA	9	True	ATTAAA	-14	NA	44498545	44504835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_169327_14	chr7	+	1751	5	NIC	ENSMUSG00000011096.18	novel	1757	5	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	123.030484027334	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	2166	False	NA	16	True	ATTAAA	-21	NA	44499413	44504842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44499701_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_169329_9	chr7	+	1525	5	NIC	ENSMUSG00000011096.18	novel	750	4	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	127.299842890712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	2550	False	NA	16	True	ATTAAA	-21	NA	44499797	44504842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44499859_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_169336_46	chr7	+	1770	17	FSM	ENSMUSG00000002963.18	ENSMUST00000107876.8	1770	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	53.8118466859297	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9315	False	NA	15	True	AATAAA	-17	NA	44506562	44512074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44506727_44506818_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_169339_27	chr7	+	1858	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	-16	342	4	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9319	False	NA	15	True	AATAAA	-17	NA	44506566	44512074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_169340_46	chr7	+	1952	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	166	66	-15	-66	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCCTGATGAGCCTGCT	9501	False	NA	24	True	AAGAAA	-17	NA	44506748	44512350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_169341_499	chr7	+	1676	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	166	342	-15	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9501	False	NA	15	True	AATAAA	-17	NA	44506748	44512074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_169343_7	chr7	+	1568	15	FSM	ENSMUSG00000002963.18	ENSMUST00000098478.7	1550	15	-17	-1	-15	0	multi-exon	FALSE	canonical	2	3	junction_5	63.3371686987626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9501	False	NA	15	True	AATAAA	-17	NA	44506748	44512074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_169347_96	chr7	+	1683	11	FSM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	15	0	1	0	multi-exon	FALSE	canonical	3	81	junction_5	12.7373466624725	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545517	44550048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
Isoform_16935_175	chr11	-	1559	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	-33	159	-33	1	multi-exon	FALSE	canonical	3	4398	junction_3	174.765959202208	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGGCTGTAGTGTCT	7655	False	NA	96	True	NA	NA	NA	102298403	102293969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
Isoform_169352_31	chr7	+	1483	10	FSM	ENSMUSG00000011658.17	ENSMUST00000209039.2	1453	10	-12	-18	1	-2	multi-exon	FALSE	canonical	3	34	junction_5	26.1448954015034	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCGGGCTCTTTGCTGT	NA	False	NA	24	True	AATAAA	-35	NA	44545517	44550046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
Isoform_169355_5	chr7	+	2709	8	FSM	ENSMUSG00000011658.17	ENSMUST00000207480.2	2717	8	1	7	1	-7	multi-exon	FALSE	canonical	3	96	junction_1	10.3903408834104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCACCCCGGGCTCTTT	NA	False	NA	19	True	AATAAA	-30	NA	44545517	44550041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548125_44548199_44548296_44548408_44548811_44549556
Isoform_169356_4	chr7	+	2643	9	NIC	ENSMUSG00000011658.17	novel	1698	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	96	junction_1	8.1700673191841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545510	44550048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
Isoform_169357_3	chr7	+	2831	7	NIC	ENSMUSG00000011658.17	novel	1698	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	96	junction_1	8.78287475083693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545517	44550048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548663_44548735_44548811_44549556
Isoform_169358_4	chr7	+	1862	11	NIC	ENSMUSG00000059891.15	novel	1843	11	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	3.77359245282264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTCTGACAACTATACT	1410	False	NA	NA	False	AATAAA	-19	NA	44592638	44607455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44592878_44593205_44593429_44600202_44600299_44600462_44600547_44601286_44601371_44601969_44602257_44603170_44603366_44603737_44603912_44605875_44606012_44606977_44607146_44607279
Isoform_169359_6	chr7	+	1834	11	NIC	ENSMUSG00000059891.15	novel	1843	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	3.84837628097877	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACAACTATACTTTTT	1399	False	NA	NA	False	AATAAA	-23	NA	44592627	44607459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44592878_44593205_44593429_44600202_44600299_44600462_44600547_44601286_44601371_44601969_44602257_44603170_44603366_44603737_44603912_44605875_44606012_44607020_44607146_44607279
Isoform_169360_3	chr7	+	1875	11	FSM	ENSMUSG00000059891.15	ENSMUST00000080233.9	1806	11	-63	-6	-6	3	multi-exon	TRUE	canonical	1	2	junction_2	3.57910603363466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAACTATACTTTTTGAT	1393	False	NA	NA	False	AATAAA	-26	NA	44592621	44607462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44592878_44593205_44593429_44600202_44600299_44600462_44600547_44601286_44601371_44601969_44602257_44603170_44603366_44603737_44603912_44605875_44606012_44607020_44607178_44607279
Isoform_169361_3	chr7	+	746	2	FSM	ENSMUSG00000087138.2	ENSMUST00000152595.2	704	2	-43	1	3	-1	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGGCTACAGACTGATT	NA	False	NA	10	True	NA	NA	NA	44636353	44641751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44636795_44641446
Isoform_169362_6	chr7	+	1339	8	NIC	ENSMUSG00000003184.16	novel	2031	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	54.0181375435461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647098	44651813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650241_44651096_44651213_44651587
Isoform_169363_36	chr7	+	1574	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	-1	458	-1	0	multi-exon	TRUE	canonical	3	81	junction_5	29.0601066054199	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647070	44651814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
Isoform_169364_102	chr7	+	1551	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	22	458	4	0	multi-exon	FALSE	canonical	3	81	junction_5	29.0601066054199	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647093	44651814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
Isoform_169365_26	chr7	+	1647	7	FSM	ENSMUSG00000003184.16	ENSMUST00000207555.2	1641	7	-17	11	6	0	multi-exon	FALSE	canonical	3	134	junction_1	17.7458915433028	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647095	44651814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
Isoform_169366_15	chr7	+	2312	6	NIC	ENSMUSG00000003184.16	novel	1797	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	134	junction_1	18.4499322491981	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647080	44651814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44651213_44651587
Isoform_169367_5	chr7	+	1823	7	FSM	ENSMUSG00000003184.16	ENSMUST00000207476.2	1797	7	-26	0	6	0	multi-exon	FALSE	canonical	3	15	junction_1	53.8196577056707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647077	44651814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44647491_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
Isoform_169368_174	chr7	+	962	6	FSM	ENSMUSG00000038387.10	ENSMUST00000044111.10	995	6	30	3	30	-3	multi-exon	FALSE	canonical	3	253	junction_4	17.1860408471527	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGATGCTTTTTATT	NA	False	NA	6	True	AATAAA	-14	NA	44667414	44671068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
Isoform_169371_16	chr7	+	1751	9	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-3	-20	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	158.639479244607	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCCTTAAATCTGGCC	3122	False	NA	5	True	NA	NA	NA	44711916	44727614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724106_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
Isoform_169372_351	chr7	+	1767	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	38	9	-2	-9	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCCAAATTCTTTGT	3123	False	NA	16	True	NA	NA	NA	44711917	44727625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
Isoform_169373_26	chr7	+	1035	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	-14	793	13	1	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGGCGCCTCATTGT	3071	False	NA	28	True	AATAAA	-19	NA	44711865	44726841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
Isoform_169378_28	chr7	+	1693	9	FSM	ENSMUSG00000003421.14	ENSMUST00000107829.9	972	9	64	-785	-3	-9	multi-exon	FALSE	canonical	3	37	junction_6	164.802912595621	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCCAAATTCTTTGT	3122	False	NA	16	True	NA	NA	NA	44711916	44727625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
Isoform_169380_7	chr7	+	2406	9	NNC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_4	174.833313473148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCCTGGCGCCTCATTG	3054	False	NA	27	True	AATAAA	-18	NA	44711848	44726840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724403_44724428_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
Isoform_169387_12	chr7	+	1089	10	NIC	ENSMUSG00000003423.16	novel	1077	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	115.92792567202	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803727	44809489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44803845_44805716_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
Isoform_169388_335	chr7	+	1066	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	11	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	50.5151242478703	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803737	44809489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
Isoform_169390_154	chr7	+	1174	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	12	-1	12	0	multi-exon	FALSE	canonical	3	114	junction_1	85.8518678298646	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803749	44809489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
Isoform_169392_7	chr7	+	1185	10	FSM	ENSMUSG00000003423.16	ENSMUST00000107811.4	1072	10	-113	0	-113	0	multi-exon	FALSE	canonical	3	17	junction_1	115.619106456406	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44805253	44809489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44805480_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
Isoform_169393_10	chr7	+	1441	9	ISM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	1510	-1	-119	0	3prime_fragment	FALSE	canonical	3	336	junction_3	22.7705950734714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44805247	44809489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
Isoform_169394_3	chr7	+	2933	12	FSM	ENSMUSG00000070570.6	ENSMUST00000085374.7	2915	12	-23	5	-23	-2	multi-exon	TRUE	canonical	0	0	junction_3	1.21287855128421	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGGTGGTCGCGTGGTG	16	False	NA	14	True	AATAAA	-15	NA	44813349	44825561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44813569_44818138_44818392_44819240_44819360_44819633_44819749_44819824_44819913_44820083_44820171_44820270_44820414_44821198_44821349_44821481_44821615_44822315_44822427_44822785_44822914_44824174
Isoform_169399_861	chr7	+	2061	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	55	24	-2	1	multi-exon	FALSE	canonical	3	157	junction_1	60.1724793633042	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	5485	False	NA	NA	False	AATAAA	-14	NA	44865231	44883044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
Isoform_169402_35	chr7	+	2076	12	NIC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	100.831419739145	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	5512	False	NA	NA	False	AATAAA	-14	NA	44865258	44883044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44865299_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
Isoform_169404_18	chr7	+	2066	12	NIC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	25	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	97.4747265400093	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	5554	False	NA	NA	False	AATAAA	-14	NA	44865300	44883044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_44865331_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
Isoform_169407_17	chr7	+	3408	11	FSM	ENSMUSG00000030796.18	ENSMUST00000107801.10	3396	11	-11	-1	-7	1	multi-exon	FALSE	canonical	3	317	junction_7	23.9883304963059	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	5518	False	NA	NA	False	AATAAA	-14	NA	44865264	44883044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
Isoform_169417_4	chr7	+	2432	6	FSM	ENSMUSG00000038239.12	ENSMUST00000085351.7	2411	6	-17	-4	-17	4	multi-exon	FALSE	canonical	1	1	junction_2	2.87054001888146	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCGAGTGGGGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	44984696	44988402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44986799_44986884_44986956_44987310_44987380_44987577_44987633_44988112_44988150_44988304
Isoform_169418_4	chr7	+	3366	2	FSM	ENSMUSG00000038201.11	ENSMUST00000107774.3	2182	2	700	-1884	700	1884	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTAGTGTTGAGTTATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	45055776	45061071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45056440_45058368
Isoform_169419_24	chr7	+	1458	3	FSM	ENSMUSG00000074121.4	ENSMUST00000058879.8	1963	3	-18	523	-18	-523	multi-exon	FALSE	canonical	3	16	junction_1	4	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTTGTGGTATGTAC	619	False	NA	NA	False	NA	NA	NA	45063100	45066080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45063213_45064154_45064279_45064858
Isoform_169420_4	chr7	+	2295	6	FSM	ENSMUSG00000118462.2	ENSMUST00000238591.2	2278	6	-7	-10	-7	1	multi-exon	TRUE	canonical	0	0	junction_4	1.01980390271856	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATGTTCTTTAGTAGG	5288	False	NA	NA	False	AATAAA	-16	NA	45067769	45071279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45067950_45068137_45068309_45068402_45068568_45069133_45069253_45069466_45070807_45070959
Isoform_169421_225	chr7	+	3638	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	40	0	7	0	multi-exon	FALSE	canonical	3	89	junction_1	61.1041369757855	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	1067	False	NA	25	True	AATACA	-21	NA	45084307	45106043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_169422_62	chr7	+	3672	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	5	1	5	-1	multi-exon	TRUE	canonical	3	89	junction_1	61.1041369757855	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGCTGGACATAAGCT	1032	False	NA	24	True	AATACA	-20	NA	45084272	45106042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_169426_8	chr7	+	3273	14	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	3152	2	3119	-2	3prime_fragment	FALSE	canonical	3	93	junction_6	62.4571805982629	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGCTGGACATAAGC	4179	False	NA	23	True	AATACA	-19	NA	45087419	45106041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_169427_10	chr7	+	3134	13	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	4493	-15	4460	15	3prime_fragment	FALSE	canonical	3	93	junction_5	63.720036531342	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGTGGTGTGGTGGG	5520	False	NA	40	True	AATACA	-36	NA	45088760	45106058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_169430_54	chr7	+	2222	7	NIC	ENSMUSG00000003865.17	novel	480	5	NA	NA	3	15	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	83.740505266103	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGTGGTGTGGTGGG	NA	False	NA	40	True	AATACA	-36	NA	45097031	45106058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_45097078_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_169436_3	chr7	+	1458	9	ISM	ENSMUSG00000023467.19	ENSMUST00000210868.2	1664	11	1880	-3	709	3	3prime_fragment	FALSE	canonical	3	4	junction_8	26.7111282988945	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAAGGCAGTGTG	1993	False	NA	NA	False	AATAAA	-13	NA	45165940	45173059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646_45171773_45172884
Isoform_169437_4	chr7	+	1334	8	ISM	ENSMUSG00000023467.19	ENSMUST00000107758.10	1597	10	30157	0	713	0	3prime_fragment	FALSE	canonical	3	17	junction_3	22.8339167709362	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCTGTGCGTTTGGA	1997	False	NA	17	True	AATAAA	-18	NA	45165944	45171806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45166111_45167203_45167392_45168009_45168331_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
Isoform_169438_35	chr7	+	805	5	ISM	ENSMUSG00000023467.19	ENSMUST00000085331.14	1525	10	4982	1	3776	1	3prime_fragment	FALSE	canonical	3	69	junction_2	4.38748219369606	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTCTGTGCGTTTGG	5060	False	NA	16	True	AATAAA	-17	NA	45169007	45171805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
Isoform_169440_5	chr7	+	692	3	ISM	ENSMUSG00000040428.20	ENSMUST00000211797.2	2655	18	19859	0	17	0	3prime_fragment	FALSE	canonical	3	13	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	False	NA	8	True	AATAAA	-17	NA	45199275	45203653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45199390_45202992_45203106_45203188
Isoform_169441_5	chr7	+	547	2	FSM	ENSMUSG00000040428.20	ENSMUST00000211348.2	476	2	-7	-64	-7	-2	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTGTGACATTGTG	NA	False	NA	6	True	AATAAA	-15	NA	45199305	45203651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45199390_45203188
Isoform_169442_164	chr7	+	1337	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	56	7	12	-4	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	3	True	NA	NA	NA	45204372	45216738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
Isoform_169445_6	chr7	+	1449	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	-56	7	-56	-4	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	3	True	NA	NA	NA	45204260	45216738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
Isoform_169447_10	chr7	+	1273	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3094	4	-68	-4	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	3	True	NA	NA	NA	45208561	45216738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
Isoform_169449_95	chr7	+	1222	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3145	4	-17	-4	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	3	True	NA	NA	NA	45208612	45216738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
Isoform_169454_824	chr7	+	1575	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	196	1	-1	0	multi-exon	FALSE	canonical	3	349	junction_4	47.8895604490164	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTATCATGCTCTAA	2451	False	NA	NA	False	AATAAA	-17	NA	45219772	45239134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
Isoform_169455_63	chr7	+	1595	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	173	4	-24	1	multi-exon	FALSE	canonical	3	349	junction_4	47.8895604490164	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGGCTATCATGCTC	2428	False	NA	NA	False	AATAAA	-14	NA	45219749	45239131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
Isoform_169456_22	chr7	+	1775	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	-4	1	-4	0	multi-exon	FALSE	canonical	3	349	junction_4	47.8895604490164	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTATCATGCTCTAA	2251	False	NA	NA	False	AATAAA	-17	NA	45219572	45239134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
Isoform_169458_10	chr7	+	1981	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	-220	11	-220	-6	multi-exon	TRUE	canonical	3	349	junction_4	47.8895604490164	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAGACATTGGCTAT	2035	False	NA	NA	False	AATAAA	-7	NA	45219356	45239124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
Isoform_169464_17	chr7	+	2399	10	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	1484	1	1484	-1	3prime_fragment	FALSE	canonical	3	17	junction_1	24.3026188702086	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTTGTCAAGATTTGG	850	False	NA	5	True	AATAAA	-18	NA	45278395	45288516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45278506_45279563_45279920_45281659_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
Isoform_169465_4	chr7	+	2474	10	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	1410	0	1410	0	3prime_fragment	FALSE	canonical	3	17	junction_1	24.3026188702086	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTGTCAAGATTTGGG	776	False	NA	6	True	AATAAA	-19	NA	45278321	45288517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45278506_45279563_45279920_45281659_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
Isoform_169466_4	chr7	+	2886	10	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	997	1	997	-1	3prime_fragment	FALSE	canonical	3	17	junction_1	24.3026188702086	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTTGTCAAGATTTGG	363	False	NA	5	True	AATAAA	-18	NA	45277908	45288516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45278506_45279563_45279920_45281659_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
Isoform_169469_17	chr7	+	1817	8	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	4863	2	4863	-2	3prime_fragment	FALSE	canonical	3	61	junction_1	11.5245965886278	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACTTGTCAAGATTTG	4229	False	NA	4	True	AATAAA	-17	NA	45281774	45288515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
Isoform_169474_9	chr7	+	1403	3	ISM	ENSMUSG00000042918.18	ENSMUST00000210213.2	2486	9	3985	182	-422	-155	3prime_fragment	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTTCTCATGTCTTA	NA	False	NA	NA	False	NA	NA	NA	45293385	45295010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45293853_45293942_45293998_45294129
Isoform_169476_12	chr7	+	1311	6	NIC	ENSMUSG00000003273.15	novel	1585	9	NA	NA	-30	0	intron_retention	FALSE	canonical	3	16	junction_2	4.16653333119993	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCGGTGGTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	45350409	45354033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_45350791_45351857_45352044_45352256_45352559_45352882_45353038_45353136_45353303_45353912
Isoform_169477_18	chr7	+	1813	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	-7	31	-7	-31	multi-exon	FALSE	canonical	3	28	junction_1	14.613540144522	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCAGCTACTGGCTCT	NA	False	NA	NA	False	AATAAA	-34	NA	45354504	45359596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
Isoform_169481_7	chr7	+	1394	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	-197	-41	-16	41	multi-exon	FALSE	canonical	3	23	junction_1	20	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTTGTGGCGGACA	NA	False	NA	NA	False	AATAAA	-17	NA	45354495	45359579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45355187_45357683_45357896_45359088
Isoform_169482_7	chr7	+	1298	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	-233	91	-52	-5	multi-exon	FALSE	canonical	3	23	junction_1	20	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTAGCCTTCCCCCA	NA	False	NA	NA	False	AATACA	-15	NA	45354459	45359447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45355187_45357683_45357896_45359088
Isoform_169487_8199	chr7	+	639	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	33	7	5	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	8199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTCCTCTGTGTTCAT	5955	False	NA	9	True	AATAAA	-16	NA	45367527	45370252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
Isoform_169488_987	chr7	+	672	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	3	4	3	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5925	False	NA	12	True	AATAAA	-19	NA	45367497	45370255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
Isoform_1695_3	chr10	-	5465	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-16	260	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421419	14280045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
Isoform_169503_3	chr7	+	1216	9	NIC	ENSMUSG00000062044.17	novel	4997	15	NA	NA	-412	796	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.21834929310112	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCCGTGGCCTCAACCT	1805	False	NA	NA	False	GGGGCT	-31	NA	45436759	45442806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_45436895_45437069_45437179_45437327_45437447_45440298_45440387_45440718_45440868_45441734_45441820_45441900_45442023_45442114_45442265_45442547
Isoform_169504_20	chr7	+	2107	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	53	-561	0	561	multi-exon	FALSE	canonical	3	208	junction_1	16.5378354085412	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGAAACAAACAAACAA	3997	False	NA	NA	False	NA	NA	NA	45522248	45533717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
Isoform_169505_248	chr7	+	1540	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	53	6	0	-3	multi-exon	TRUE	canonical	3	208	junction_1	16.5378354085412	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTTGCTGTTCCCTG	3997	False	NA	11	True	AATAAA	-15	NA	45522248	45533150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
Isoform_169508_6	chr7	+	1313	5	FSM	ENSMUSG00000002778.15	ENSMUST00000211234.2	832	5	-2	-479	-2	-3	multi-exon	FALSE	canonical	2	3	junction_1	102.020524895729	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTTGCTGTTCCCTG	4297	False	NA	11	True	AATAAA	-15	NA	45522548	45533150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45522599_45523182_45523284_45523466_45523626_45530923_45531177_45532400
Isoform_169509_183	chr7	+	2153	8	FSM	ENSMUSG00000002781.20	ENSMUST00000069772.16	2297	8	143	1	0	-1	multi-exon	FALSE	canonical	3	12	junction_1	17.4414472344658	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGAGTAGTGTGGCTG	5635	False	NA	6	True	AATAAA	-13	NA	45546507	45566836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
Isoform_169514_261	chr7	+	2099	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	376	-9	54	5	multi-exon	FALSE	canonical	3	48	junction_2	6.94422221866655	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGTGTGGCTGCAGGTC	6028	False	NA	12	True	AATAAA	-19	NA	45546900	45566842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
Isoform_169518_11	chr7	+	1975	6	ISM	ENSMUSG00000002781.20	ENSMUST00000209292.2	2026	7	383	1	41	-1	3prime_fragment	FALSE	canonical	1	2	junction_3	22.0871003076456	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGAGTAGTGTGGCTG	6015	False	NA	6	True	AATAAA	-13	NA	45546887	45566836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45547091_45549055_45549161_45556341_45556537_45558745_45559026_45565506_45565697_45565834
Isoform_169519_10	chr7	+	2003	6	NIC	ENSMUSG00000002781.20	novel	2466	7	NA	NA	43	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	24.0116638323961	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTAGTGTGGCTGCAGG	6017	False	NA	10	True	AATAAA	-17	NA	45546889	45566840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_45547091_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
Isoform_169520_3	chr7	+	1906	6	ISM	ENSMUSG00000040189.19	ENSMUST00000210039.3	2598	15	0	11179	0	6171	5prime_fragment	FALSE	canonical	3	18	junction_1	2.78567765543682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAATTGTGTGCATGTG	3132	False	NA	NA	False	AAGAAA	-19	NA	45573638	45587208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979
Isoform_169521_5	chr7	+	2585	15	FSM	ENSMUSG00000040189.19	ENSMUST00000210039.3	2598	15	12	1	11	-1	multi-exon	FALSE	canonical	3	7	junction_9	4.94923205752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGGTTCCTACAAGTGT	3144	False	NA	11	True	AATAAA	-22	NA	45573650	45598386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45591618_45592001_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
Isoform_169522_9	chr7	+	2978	14	NIC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	16	junction_6	3.49640559303493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3134	False	NA	10	True	AATAAA	-21	NA	45573640	45598385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
Isoform_169523_8	chr7	+	2640	2	NNC	ENSMUSG00000040189.19	novel	1078	5	NA	NA	1	2991	intron_retention	FALSE	canonical	3	12	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTTGGTCATG	3134	False	NA	NA	False	NA	NA	NA	45573640	45577482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_45574014_45575215
Isoform_169528_658	chr7	+	4207	31	FSM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	44	6	44	-6	multi-exon	FALSE	canonical	3	214	junction_14	37.3234510730184	658	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATAGTGTGGGGT	8137	False	NA	23	True	AATAAA	-23	NA	45683165	45733630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
Isoform_169553_62	chr7	+	2790	16	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	187.878920821067	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4721	False	NA	4	True	AATAAA	-15	NA	46445541	46473224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_46445713_46446820_46446890_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
Isoform_16956_5	chr11	-	2783	26	ISM	ENSMUSG00000034664.14	ENSMUST00000103086.4	3437	30	2678	14	-6	-7	3prime_fragment	FALSE	canonical	0	0	junction_4	1.63266653055668	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATCCGCCATGCTGCCT	7217	False	NA	NA	False	AATAAA	-12	NA	102358031	102344136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_102344344_102346389_102346507_102346724_102346827_102347055_102347173_102347790_102347911_102348010_102348155_102348285_102348386_102348597_102348679_102348938_102349019_102349167_102349261_102350698_102350847_102350963_102351032_102351341_102351468_102351574_102351727_102351815_102351872_102351954_102352060_102352143_102352190_102352462_102352646_102355765_102355978_102356130_102356184_102356322_102356377_102356536_102356581_102356715_102356764_102357082_102357212_102357302_102357349_102357879
Isoform_169561_22	chr7	+	1798	14	ISM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	13	4533	2	-3642	5prime_fragment	FALSE	canonical	3	472	junction_5	48.9200531237767	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCGAGTACATTGTTC	4719	False	NA	NA	False	NA	NA	NA	46445539	46468691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545
Isoform_169563_1413	chr7	+	2719	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	15	2	4	-2	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCTCTCTTGGAGTC	4721	False	NA	2	True	AATAAA	-13	NA	46445541	46473222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
Isoform_169564_30	chr7	+	3026	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	-290	0	-290	0	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4416	False	NA	4	True	AATAAA	-15	NA	46445236	46473224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
Isoform_169583_12410	chr7	+	1583	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	5	0	1	0	multi-exon	FALSE	canonical	3	6684	junction_1	674.726490316405	12410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495267	46505051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
Isoform_16959_9	chr11	-	6838	9	NIC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	61.2204010114276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGTGGAGTCTGTTGT	686	False	NA	-5	True	AATAAA	-16	NA	102446976	102366742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102422138_102422157_102429107_102429183_102446905
Isoform_1696_10	chr10	-	6945	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	214	-9	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCAAATTATTCAGTTC	NA	False	NA	-11	True	AATAAA	-16	NA	14421189	14278335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
Isoform_169603_8	chr7	+	1217	8	FSM	ENSMUSG00000030851.16	ENSMUST00000014545.11	1370	8	7	146	7	-104	multi-exon	FALSE	canonical	1	3	junction_1	3.73619909446343	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTCAAGGCTAGAAAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	46510633	46527420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_46510726_46511186_46511320_46515832_46515951_46519022_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
Isoform_169604_45	chr7	+	1787	3	FSM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	48	-4	48	4	multi-exon	FALSE	canonical	3	21	junction_1	1	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGACTTGTCTGCCTG	NA	False	NA	NA	False	AATAAA	-28	NA	46700396	46704529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_46700550_46702597_46702863_46703160
Isoform_169605_428	chr7	+	2384	17	FSM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	26	0	-3	0	multi-exon	TRUE	canonical	3	240	junction_5	25.4348893009189	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	False	NA	9	True	AATAAA	-20	NA	48438776	48477188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
Isoform_169608_75	chr7	+	2375	17	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	63.8620339090449	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	False	NA	9	True	AATAAA	-20	NA	48438780	48477188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_48438886_48445653_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
Isoform_169612_3	chr7	+	3095	21	NIC	ENSMUSG00000052512.18	novel	10665	39	NA	NA	3056	324	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	4.33474336033865	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAACGTAAGATTCC	NA	False	NA	NA	False	TATAAA	-14	NA	49206695	49256893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
Isoform_169613_3	chr7	+	2249	12	ISM	ENSMUSG00000052512.18	ENSMUST00000184945.8	10665	39	335824	2948	-2576	321	3prime_fragment	FALSE	canonical	2	6	junction_5	3.93332866414253	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATTTTAAACGTAAGAT	NA	False	NA	NA	False	TATAAA	-11	NA	49232415	49256890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
Isoform_169615_31	chr7	+	1277	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	-7	18	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	93.7861397009174	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGTTGTTCTAG	9887	False	NA	13	True	AATAAA	-13	NA	49408869	49423741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_49408894_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_169616_35	chr7	+	1238	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	-10	18	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	90.6598036618214	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGTTGTTCTAG	9870	False	NA	13	True	AATAAA	-13	NA	49408852	49423741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_49408894_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_169619_8	chr7	+	1431	6	FSM	ENSMUSG00000039745.9	ENSMUST00000085272.7	1418	6	10	-23	10	23	multi-exon	TRUE	canonical	3	12	junction_1	99.2685247195706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGTTCTAGTTGCT	9904	False	NA	18	True	AATAAA	-18	NA	49408886	49423746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_49409060_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_169620_133	chr7	+	1341	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	22	-25	22	25	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTTCTAGTTGCTAA	9940	False	NA	20	True	AATAAA	-20	NA	49408922	49423748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_169621_26	chr7	+	1000	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	-28	366	-4	-366	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTGGTGTGCTTCTC	9890	False	NA	1	True	TATAAA	-15	NA	49408872	49423357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_169626_7	chr7	+	1603	5	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	37	16	intron_retention	FALSE	canonical	3	230	junction_1	21.9928965804871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCCTGTGTGTTGTTCT	9955	False	NA	11	True	AATAAA	-11	NA	49408937	49423739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_169627_9	chr7	+	1300	5	ISM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	349	-25	349	25	3prime_fragment	FALSE	canonical	3	230	junction_1	21.9928965804871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTTCTAGTTGCTAA	NA	False	NA	20	True	AATAAA	-20	NA	49409249	49423748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_169630_26	chr7	+	2431	16	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	13	-15	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	155.061650821715	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCTGCATCACACT	NA	False	NA	29	True	AATAAA	-13	NA	49428106	49507998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_49428250_49428328_49428462_49430056_49430092_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
Isoform_169635_1526	chr7	+	2500	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	3	4	3	-4	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACACTGAATGTTTTCA	NA	False	NA	40	True	AATAAA	-24	NA	49428096	49508009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
Isoform_169638_23	chr7	+	5488	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	16	-2997	16	2997	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATGTGATTATTGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	49428109	49511010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
Isoform_169642_20	chr7	+	2257	14	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	15	-13	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	164.362422460731	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGCATCACACTGA	NA	False	NA	31	True	AATAAA	-15	NA	49428108	49508000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
Isoform_16965_57	chr11	-	6820	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	49	2	26	-2	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGTGGAGTCTGTTGT	686	False	NA	-5	True	AATAAA	-16	NA	102446976	102366742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
Isoform_169655_4	chr7	+	2160	10	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-46	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	19.956124713487	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTGTCTCTGTATCA	971	False	NA	7	True	ATTAAA	-24	NA	51512128	51644207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_51512193_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_169656_3	chr7	+	2427	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	19.2142525225417	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTGTCTCTGTATCA	608	False	NA	7	True	ATTAAA	-24	NA	51511765	51644207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_51512193_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_169657_3	chr7	+	2080	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-65	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	19.2142525225417	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTATTTGTCTCTGTA	952	False	NA	4	True	ATTAAA	-21	NA	51512109	51644204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_51512193_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_169658_19	chr7	+	2361	10	NIC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	-48	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.8980071581387	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTATTTGTCTCTGTAT	969	False	NA	5	True	ATTAAA	-22	NA	51512126	51644205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_51512394_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_169659_5	chr7	+	2415	10	NIC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	-43	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.8980071581387	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCCCAGCAATATGA	974	False	NA	64	True	AATAAA	-18	NA	51512131	51644264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_51512394_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_169662_4	chr7	+	2951	10	NIC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	-169	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.8980071581387	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATTTCCCAGCAATAT	436	False	NA	62	True	AATAAA	-16	NA	51511593	51644262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_51512394_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_169663_12	chr7	+	2263	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-48	2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	15.4008928312614	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACATTATTTGTCTCTGT	969	False	NA	3	True	ATTAAA	-20	NA	51512126	51644203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_51512394_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_169664_7	chr7	+	2622	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	15.4008928312614	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACACATTATTTGTCTCT	608	False	NA	1	True	ATTAAA	-18	NA	51511765	51644201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_51512394_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_169669_4	chr7	+	2261	13	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	30	11466	4	-2143	5prime_fragment	FALSE	canonical	3	83	junction_7	5.69356361751291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	55443942	55465381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607
Isoform_169671_9	chr7	+	2336	14	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	24	10068	-2	-745	5prime_fragment	FALSE	canonical	3	83	junction_7	5.82384407099929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGTGTATAGCACTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	55443936	55466779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205
Isoform_169672_3	chr7	+	4136	14	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	8	8284	5	-225	intron_retention	FALSE	canonical	3	83	junction_7	5.82384407099929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACCTGGCAGAATGTGT	NA	False	NA	NA	False	GATAAA	-12	NA	55443920	55468563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205
Isoform_169674_33	chr7	+	2606	18	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	-9	4967	2	3092	5prime_fragment	FALSE	canonical	3	67	junction_15	9.6774986044305	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTCCTGGAAAGTTTT	NA	False	NA	3	True	AATAAA	-14	NA	55443903	55471880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725
Isoform_169677_135	chr7	+	3668	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	5	232	5	-1	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACCTATTTCAT	NA	False	NA	14	True	AATAAA	-17	NA	55443906	55481193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
Isoform_169689_174	chr7	+	4154	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	154	2132	19	-1	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAATAAAAAAACA	NA	False	NA	-23	True	NA	NA	NA	55491972	55580218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_169691_19	chr7	+	4329	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	-19	2130	-19	1	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAACAAA	NA	False	NA	-21	True	NA	NA	NA	55491799	55580220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_169694_164	chr7	+	4374	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	162	1904	-17	200	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55491980	55580446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_169695_483	chr7	+	4325	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	213	1902	29	202	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55492031	55580448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_16972_4	chr11	-	7051	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	-178	-2	15	2	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGAGTCTGTTGTGATT	459	False	NA	-1	True	AATAAA	-20	NA	102447203	102366738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
Isoform_169732_4	chr7	+	2495	15	ISM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-127	127649	-70	-10573	5prime_fragment	TRUE	canonical	2	10	junction_12	4.19487053143601	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAACTTTTAATTCATT	NA	False	NA	NA	False	AATAAA	-23	NA	55699873	55753899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475
Isoform_169733_3	chr7	+	2801	17	ISM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-79	122783	-22	-5707	5prime_fragment	FALSE	canonical	2	10	junction_12	4.2458619560697	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGATTACGATGGGGT	NA	False	NA	NA	False	AATAAA	-18	NA	55699921	55758765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433
Isoform_169734_10	chr7	+	3086	20	ISM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-115	117073	-58	3	5prime_fragment	TRUE	canonical	2	7	junction_17	4.35094793377692	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAAAGAAATTGATG	NA	False	NA	NA	False	AAAAAG	-8	NA	55699885	55764475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433_55758635_55762792_55763022_55763145_55763271_55764449
Isoform_169735_5	chr7	+	3810	20	ISM	ENSMUSG00000030451.17	ENSMUST00000164095.3	15261	93	154305	-33	-15806	-4	3prime_fragment	FALSE	canonical	3	39	junction_1	11.1086300707991	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGGCTGAATTTC	1360	False	NA	3	True	AATAAA	-12	NA	55854441	55881544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
Isoform_169739_6	chr7	+	847	5	ISM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	11	39654	0	23367	5prime_fragment	FALSE	canonical	3	32	junction_3	4.32290411644765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTCCAATGTTACTGT	NA	False	NA	NA	False	AATAAA	-15	NA	57240920	57438896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613
Isoform_16974_7	chr11	-	2353	2	FSM	ENSMUSG00000034621.15	ENSMUST00000125754.2	893	2	224	-1684	8	794	multi-exon	FALSE	canonical	3	159	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAGAAAA	668	False	NA	NA	False	AATAGA	-12	NA	102446994	102426918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102429183_102446905
Isoform_169741_32	chr7	+	5568	9	FSM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	7	4	-4	0	multi-exon	FALSE	canonical	3	23	junction_5	6.11223158919883	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGAAGACTGATTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	57240916	57478546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
Isoform_169742_6	chr7	+	5046	21	FSM	ENSMUSG00000025324.9	ENSMUST00000168747.3	5419	21	-27	400	-27	-400	multi-exon	FALSE	canonical	1	3	junction_4	4.04474968323134	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTGTCTAGATTTAT	NA	False	NA	NA	False	TATAAA	-23	NA	58307966	58478768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474047_58474249_58476820_58476902_58476993_58477099_58477522_58477711_58477866
Isoform_169743_4	chr7	+	5455	21	FSM	ENSMUSG00000025324.9	ENSMUST00000168747.3	5419	21	-35	-1	-35	1	multi-exon	FALSE	canonical	1	3	junction_4	4.04474968323134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAGTGTCTGGTGCCAC	NA	False	NA	NA	False	AATAAA	-17	NA	58307958	58479169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474047_58474249_58476820_58476902_58476993_58477099_58477522_58477711_58477866
Isoform_16975_3	chr11	-	1110	5	NNC	ENSMUSG00000078640.10	novel	796	4	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1.78535710713571	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTTGCTTCTTTTTTT	8228	False	NA	NA	False	NA	NA	NA	102470297	102467225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102467624_102467724_102467906_102469575_102469722_102469813_102469917_102470015
Isoform_169752_7	chr7	+	5052	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	1	4803	1	4	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTTCAGTTTATT	NA	False	NA	13	True	AATAAA	-13	NA	58878550	58956481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_169754_7	chr7	+	3927	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	-15	5944	-15	648	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTGTCTTCATGTGTC	NA	False	NA	2	True	ATTAAA	-16	NA	58878534	58955340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_169759_18	chr7	+	4974	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTGTTCTTCAGTTTA	NA	False	NA	11	True	AATAAA	-11	NA	58878559	58956479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_16976_4	chr11	-	500	2	ISM	ENSMUSG00000078640.10	ENSMUST00000107080.2	585	3	271	-94	271	1	3prime_fragment	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTCTTTTTTTTTT	8851	False	NA	NA	False	NA	NA	NA	102469674	102467222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_102467624_102469575
Isoform_169764_7	chr7	+	5031	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTCTTCAGTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	58878503	58956480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_169772_29	chr7	+	4862	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	54	-5	3	3	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTCTTCAGTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	58878552	58956480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_169777_15	chr7	+	4934	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	-17	-6	-16	4	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTTCAGTTTATT	NA	False	NA	13	True	AATAAA	-13	NA	58878481	58956481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_169778_9	chr7	+	8964	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	54	-4107	3	-702	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGGAGTGTCTTTCCA	NA	False	NA	7	True	NA	NA	NA	58878552	58960582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_16978_260	chr11	-	2328	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	42	-4	-6	4	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTGTTCTTTCCAA	NA	False	NA	0	True	AATAAA	-20	NA	102588566	102575507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
Isoform_169789_65	chr7	+	2000	11	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	301.433309373732	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGAGTTTTCAGACT	NA	False	NA	27	True	ATTAAA	-24	NA	63835207	63861176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
Isoform_16979_1109	chr11	-	2300	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	66	0	18	0	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102588542	102575511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
Isoform_169790_18	chr7	+	2046	11	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	33	1	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	301.433309373732	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGAGTTTTCAGACT	NA	False	NA	27	True	ATTAAA	-24	NA	63835161	63861176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
Isoform_169797_222	chr7	+	1991	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	7	-6	7	6	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTCAGACTATGTT	NA	False	NA	32	True	ATTAAA	-29	NA	63835135	63861181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
Isoform_169798_862	chr7	+	1824	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	175	-7	1	7	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTCAGACTATGTTT	NA	False	NA	33	True	ATTAAA	-30	NA	63835303	63861182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
Isoform_1698_8	chr10	-	4675	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-290	97	-147	-97	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGGCAAATATTGAATAT	NA	False	NA	NA	False	ATTAAA	-18	NA	14421070	14280402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
Isoform_169802_29	chr7	+	2670	11	FSM	ENSMUSG00000030523.19	ENSMUST00000205731.2	2575	11	-95	0	1	0	multi-exon	FALSE	canonical	3	82	junction_10	225.867682504603	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGCTCTTTGACTCAT	NA	False	NA	NA	False	NA	NA	NA	63835207	63868483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
Isoform_169808_24	chr7	+	2908	14	FSM	ENSMUSG00000030523.19	ENSMUST00000177102.8	2928	14	-46	66	32	6	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGATGAATTGGCTGAA	NA	False	NA	19	True	AATAAA	-24	NA	63835160	63874518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
Isoform_169809_50	chr7	+	2858	14	FSM	ENSMUSG00000030523.19	ENSMUST00000177102.8	2928	14	1	69	1	3	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGATGAATTGGCT	NA	False	NA	16	True	AATAAA	-21	NA	63835207	63874515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
Isoform_169826_4	chr7	+	5401	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	-194	-2	-177	2	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGCCTTTGTTAAT	533	False	NA	7	True	AATAAA	-19	NA	63937223	63990556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
Isoform_169828_37	chr7	+	4779	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	27	399	27	-399	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCGTCACCAGTATGA	754	False	NA	9	True	AATAAA	-19	NA	63937444	63990155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
Isoform_169831_11	chr7	+	5206	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	1	-2	1	2	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGCCTTTGTTAAT	728	False	NA	7	True	AATAAA	-19	NA	63937418	63990556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
Isoform_169832_14	chr7	+	4818	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	-12	399	5	-399	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCGTCACCAGTATGA	715	False	NA	9	True	AATAAA	-19	NA	63937405	63990155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
Isoform_169833_10	chr7	+	4994	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	-190	401	-173	-401	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTCGTCACCAGTAT	537	False	NA	7	True	AATAAA	-17	NA	63937227	63990153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
Isoform_169836_4	chr7	+	653	3	NNC	ENSMUSG00000033429.11	novel	327	2	NA	NA	11	528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAAATTGCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	64042533	64049058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_64042592_64048440_64048904_64048926
Isoform_169837_4	chr7	+	794	4	NNC	ENSMUSG00000033429.11	novel	532	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	40.2022663816634	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042481	64061869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_64042592_64048440_64048662_64049916_64050093_64061582
Isoform_169838_8	chr7	+	946	4	NNC	ENSMUSG00000033429.11	novel	828	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	84.9156444164835	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042491	64061869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_64042592_64048440_64048662_64049916_64050255_64061582
Isoform_169839_41	chr7	+	557	3	FSM	ENSMUSG00000033429.11	ENSMUST00000206194.2	532	3	-31	6	4	-6	multi-exon	FALSE	canonical	3	108	junction_2	103	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACATTCATGTATTTGTT	NA	False	NA	15	True	ATTAAA	-16	NA	64042491	64061863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_64042592_64049916_64050093_64061582
Isoform_169840_130	chr7	+	723	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	99	6	4	-2	multi-exon	FALSE	canonical	3	203	junction_2	55.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTATTTGTTATTT	NA	False	NA	19	True	ATTAAA	-20	NA	64042491	64061867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_64042592_64049916_64050255_64061582
Isoform_169841_4	chr7	+	821	4	NNC	ENSMUSG00000033429.11	novel	828	3	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	145.913977702237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACATTCATGTATTTGTT	NA	False	NA	15	True	ATTAAA	-16	NA	64042497	64061863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_64042592_64049916_64050255_64059640_64059749_64061582
Isoform_169842_16	chr7	+	385	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206882.2	391	2	4	2	4	-2	multi-exon	FALSE	canonical	3	49	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTATTTGTTATTT	NA	False	NA	19	True	ATTAAA	-20	NA	64042491	64061867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_64042592_64061582
Isoform_169844_5	chr7	+	2845	14	NIC	ENSMUSG00000030519.15	novel	3321	15	NA	NA	-68	4	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	1.27794213275663	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	64151385	64403118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_64151567_64203394_64203520_64284778_64284833_64344771_64345766_64364178_64364260_64365258_64365296_64383260_64383407_64386628_64386716_64389446_64389633_64393007_64393188_64394163_64394377_64395445_64395566_64399850_64399992_64402818
Isoform_169846_4	chr7	+	2810	14	NIC	ENSMUSG00000030519.15	novel	3027	12	NA	NA	-30	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.27794213275663	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	64151855	64403118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_64152002_64203394_64203520_64284778_64284833_64344771_64345766_64364178_64364260_64365258_64365296_64383260_64383407_64386628_64386716_64389446_64389633_64393007_64393188_64394163_64394377_64395445_64395566_64399850_64399992_64402818
Isoform_169847_13	chr7	+	1836	11	ISM	ENSMUSG00000030515.10	ENSMUST00000126941.2	2709	13	3	7343	3	-7343	5prime_fragment	FALSE	canonical	3	56	junction_9	8.96437393240599	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATTGGATGATTATAAG	NA	False	NA	NA	False	AATATA	-29	NA	65294648	65326219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711
Isoform_169849_165	chr7	+	3189	19	FSM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	3	0	3	0	multi-exon	FALSE	canonical	3	56	junction_9	7.60035736651675	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCGGTATGTTCCATTGT	NA	False	NA	11	True	AATAAA	-24	NA	65294648	65341839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
Isoform_169852_21	chr7	+	954	6	FSM	ENSMUSG00000078681.11	ENSMUST00000107495.5	1003	6	41	8	-9	3	multi-exon	FALSE	canonical	3	37	junction_2	226.65709783724	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACAACCCAGAACTTTTTA	NA	False	NA	20	True	AATAAA	-20	NA	65343205	65351653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65343318_65343598_65343692_65344890_65345076_65347443_65347619_65348839_65348916_65351340
Isoform_169853_366	chr7	+	855	5	FSM	ENSMUSG00000078681.11	ENSMUST00000032726.14	908	5	52	1	-7	1	multi-exon	FALSE	canonical	3	473	junction_3	21.6333076527839	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACGACAACCCAGAACTT	NA	False	NA	16	True	AATAAA	-16	NA	65343207	65351649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65351340
Isoform_169856_6	chr7	+	2078	4	NIC	ENSMUSG00000078681.11	novel	908	5	NA	NA	-8	0	intron_retention	FALSE	canonical	3	497	junction_3	14.9666295470958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGACAACCCAGAACTTT	NA	False	NA	17	True	AATAAA	-17	NA	65343206	65351650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_65343318_65344890_65345076_65347443_65348916_65351340
Isoform_169857_18	chr7	+	843	5	NIC	ENSMUSG00000078681.11	novel	905	6	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	208.078711068672	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTTTATTTGCCTGAA	NA	False	NA	30	True	AATAAA	-30	NA	65343206	65351663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_65343318_65344917_65345076_65347443_65347619_65348839_65348916_65351340
Isoform_169864_145	chr7	+	4256	22	FSM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	104	45	-3	1	multi-exon	FALSE	canonical	3	127	junction_4	20.9878487682365	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGCTTGTATTTCTTTT	NA	False	NA	16	True	AATAAA	-21	NA	65511880	65700089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
Isoform_169865_19	chr7	+	4317	22	FSM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	104	-16	-3	16	multi-exon	FALSE	canonical	3	127	junction_4	20.9878487682365	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGGAAATCACTTTAT	NA	False	NA	77	True	AATAAA	-29	NA	65511880	65700150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
Isoform_169866_21	chr7	+	4531	22	FSM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	-171	45	124	1	multi-exon	FALSE	canonical	3	127	junction_4	20.9878487682365	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGCTTGTATTTCTTTT	NA	False	NA	16	True	AATAAA	-21	NA	65511605	65700089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
Isoform_169867_36	chr7	+	4377	22	FSM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	-17	45	-17	1	multi-exon	FALSE	canonical	3	127	junction_4	20.9878487682365	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGCTTGTATTTCTTTT	NA	False	NA	16	True	AATAAA	-21	NA	65511759	65700089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
Isoform_169874_32	chr7	+	4216	21	FSM	ENSMUSG00000030513.15	ENSMUST00000098391.11	4207	21	-2	-7	-2	1	multi-exon	FALSE	canonical	3	46	junction_14	34.1808060174128	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGCTTGTATTTCTTTT	NA	False	NA	16	True	AATAAA	-21	NA	65511881	65700089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
Isoform_169876_4	chr7	+	4583	21	FSM	ENSMUSG00000030513.15	ENSMUST00000098391.11	4207	21	-372	-4	30	-2	multi-exon	FALSE	canonical	3	46	junction_14	34.1808060174128	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGGGGCTTGTATTTCT	NA	False	NA	13	True	AATAAA	-18	NA	65511511	65700086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
Isoform_16989_41	chr11	-	2240	4	FSM	ENSMUSG00000020925.17	ENSMUST00000124869.8	407	4	-180	-1653	18	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	267.304237818175	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTTCTGTCTTGTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	102588542	102575512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102577323_102581026_102581163_102582936_102583025_102588336
Isoform_169893_2204	chr7	+	1029	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	216	3	-10	-3	multi-exon	FALSE	canonical	3	2395	junction_6	274.913622798144	2204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGTGCTGTGTATCT	NA	False	NA	20	True	AATAAA	-20	NA	65710301	65724332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
Isoform_169897_60	chr7	+	947	8	FSM	ENSMUSG00000030512.14	ENSMUST00000032723.9	955	8	12	-4	-8	-3	multi-exon	FALSE	canonical	3	89	junction_5	1022.69418095299	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGTGCTGTGTATCT	NA	False	NA	20	True	AATAAA	-20	NA	65710303	65724332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65720337_65720414_65720979_65721074_65724069
Isoform_16990_37	chr11	-	971	4	FSM	ENSMUSG00000020925.17	ENSMUST00000153157.8	989	4	18	0	18	0	multi-exon	FALSE	canonical	0	0	junction_1	267.304237818175	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCTTCTTGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	102588542	102579144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102579686_102581026_102581163_102582936_102583025_102588336
Isoform_169900_54	chr7	+	2009	7	NIC	ENSMUSG00000030512.14	novel	955	8	NA	NA	-8	3	intron_retention	FALSE	canonical	3	2772	junction_5	192.939253537365	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACTGTGTGCTGTGTATC	NA	False	NA	19	True	AATAAA	-19	NA	65710303	65724331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65720414_65720979_65721074_65724069
Isoform_169909_5	chr7	+	2667	5	FSM	ENSMUSG00000075701.11	ENSMUST00000205965.2	702	5	-9	-1956	-9	0	multi-exon	FALSE	canonical	3	415	junction_3	16.7089048115069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729415	65739153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940
Isoform_169910_9	chr7	+	1169	6	FSM	ENSMUSG00000075701.11	ENSMUST00000206575.2	1157	6	-10	-2	-9	0	multi-exon	FALSE	canonical	3	53	junction_5	154.225808475754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729415	65739153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737017_65738514
Isoform_169911_332	chr7	+	1171	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	20	0	-8	0	multi-exon	FALSE	canonical	3	410	junction_5	18.3804243694209	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729416	65739153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
Isoform_169916_234	chr7	+	4233	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	-67	10	-67	-10	multi-exon	FALSE	canonical	3	165	junction_1	21	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCAGACCCATTTTGT	NA	False	NA	19	True	AATAAA	-26	NA	65759195	65823536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_65759976_65774989_65775486_65820579
Isoform_16993_176	chr11	-	2129	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710004	102690409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
Isoform_169932_5	chr7	+	1424	3	ISM	ENSMUSG00000053091.17	ENSMUST00000128486.8	1419	5	-22	667	-22	-667	intron_retention	FALSE	canonical	3	70	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATAGTTTTTTATTACA	NA	False	NA	NA	False	AGTAAA	-18	NA	66339674	66358983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_66339772_66345923_66346055_66357787
Isoform_169933_22	chr7	+	2651	8	FSM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	24	junction_5	18.4113984215413	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339701	66364492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
Isoform_169934_4	chr7	+	5152	8	FSM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	7	-2512	-6	0	multi-exon	FALSE	canonical	3	24	junction_5	18.4113984215413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAGTGTCCTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	66339712	66367004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
Isoform_169935_26	chr7	+	2576	8	FSM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	1	2511	1	1	multi-exon	FALSE	canonical	3	20	junction_5	19.3454102556442	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGCGTGTCTGGGTCTT	NA	False	NA	12	True	AATAAA	-18	NA	66339706	66364493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
Isoform_169936_9	chr7	+	5093	8	FSM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	-4	-1	-4	1	multi-exon	FALSE	canonical	3	20	junction_5	19.3454102556442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAGTGTCCTTGTGATA	NA	False	NA	NA	False	NA	NA	NA	66339701	66367005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
Isoform_169937_3	chr7	+	2666	8	FSM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	-87	2509	-18	0	multi-exon	FALSE	canonical	3	20	junction_5	19.3454102556442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	14	True	AATAAA	-20	NA	66339618	66364495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
Isoform_169938_5	chr7	+	3374	7	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	44	junction_3	15.1767365837763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339701	66364492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66360495_66361620_66361793_66363548
Isoform_169939_3	chr7	+	3939	6	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	44	junction_3	15.357083056362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339701	66364492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66360495_66361620_66361793_66363548
Isoform_169940_124	chr7	+	2902	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	1	-5	1	-2	multi-exon	FALSE	canonical	3	45	junction_1	19.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGATTCTCCCTCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	66872356	66878209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_66872378_66873356_66873640_66875611
Isoform_169941_35	chr7	+	3297	3	FSM	ENSMUSG00000043831.13	ENSMUST00000208998.2	2110	3	7	-1194	-6	-2	multi-exon	FALSE	canonical	3	29	junction_1	27.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGATTCTCCCTCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	66872370	66878209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_66872787_66873356_66873640_66875611
Isoform_169943_7	chr7	+	2257	12	NIC	ENSMUSG00000030555.17	novel	2492	12	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	27.3674113977112	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTGTGTTTGAAAT	NA	False	NA	14	True	AATAAA	-19	NA	67297181	67376325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_67297594_67301670_67301720_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
Isoform_169944_114	chr7	+	2208	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	9	-1	9	1	multi-exon	FALSE	canonical	3	46	junction_1	12.2429571591181	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTGTGTTTGAAAT	NA	False	NA	14	True	AATAAA	-19	NA	67297181	67376325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
Isoform_169946_9	chr7	+	2006	10	FSM	ENSMUSG00000030555.17	ENSMUST00000126093.8	1991	10	-17	2	8	1	multi-exon	TRUE	canonical	1	3	junction_1	24.6671671620895	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTTTGTGTGTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	67297180	67376322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_67297594_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
Isoform_169947_4	chr7	+	1933	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107470.2	1915	11	-14	-4	-14	1	multi-exon	FALSE	canonical	1	2	junction_1	23.6822718504792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTGTGTTTGAAAT	NA	False	NA	14	True	AATAAA	-19	NA	67305180	67376325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_67305318_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
Isoform_169948_8	chr7	+	5618	21	FSM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	-940	6731	-940	769	multi-exon	FALSE	canonical	2	11	junction_1	3.59826347006441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGGAAAGAA	NA	False	NA	NA	False	GGGGCT	-45	NA	67601634	67876685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
Isoform_16995_27	chr11	-	2235	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	5	105	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTAAGATCTATCTAT	NA	False	NA	-3	True	NA	NA	NA	102710000	102690299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
Isoform_169950_15	chr7	+	5275	21	FSM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	-934	7068	-934	432	multi-exon	FALSE	canonical	2	11	junction_1	3.59826347006441	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAAGCAGCTTTTTATT	NA	False	NA	14	True	AGTAAA	-27	NA	67601640	67876348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
Isoform_169951_3	chr7	+	5370	22	NNC	ENSMUSG00000005533.11	novel	11409	21	NA	NA	-936	432	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	5.74870585850581	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAAGCAGCTTTTTATT	NA	False	NA	14	True	AGTAAA	-27	NA	67601638	67876348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67858660_67858754_67861741_67861905_67864666_67864797_67868149_67868285_67875767
Isoform_169952_3	chr7	+	2105	3	NNC	ENSMUSG00000005533.11	novel	11409	21	NA	NA	-956	-111470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACATAAAGGAGAAAAGTC	NA	False	NA	NA	False	AATAAA	-21	NA	67601618	67726247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_67602701_67653557_67654104_67725770
Isoform_169953_252	chr7	+	2842	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	-39	12	-39	-7	multi-exon	FALSE	canonical	3	103	junction_5	20.4328167417025	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTAATTTTAGGACTT	NA	False	NA	46	True	AATAAA	-17	NA	67925703	68012828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_169957_31	chr7	+	2646	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-39	-25	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	44.7788215247215	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCTTCCACATGTTAAT	NA	False	NA	28	True	NA	NA	NA	67925703	68012810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_169958_20	chr7	+	2758	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-42	-8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	51.6048565978997	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTTAATTTTAGGACT	NA	False	NA	45	True	AATAAA	-16	NA	67925700	68012827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_169959_24	chr7	+	2547	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-15	-14	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	52.588813766174	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTAATAGCTTAATTTT	NA	False	NA	39	True	AATAAA	-10	NA	67925727	68012821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_169960_26	chr7	+	2697	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-1	-14	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	43.556203428936	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTAATAGCTTAATTTT	NA	False	NA	39	True	AATAAA	-10	NA	67925741	68012821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_67925790_67950580_67950712_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_169961_8	chr7	+	2542	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-32	-22	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	59.0536479257068	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCCACATGTTAATAGC	NA	False	NA	31	True	AATAAA	-2	NA	67925710	68012813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_67925790_67950580_67950712_67971567_67971654_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_169967_12	chr7	+	3581	4	FSM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	5	0	5	0	multi-exon	FALSE	canonical	3	9	junction_1	7.93025150224688	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCTGTTGGAGTTTAT	NA	False	NA	33	True	AGTAAA	-30	NA	73025272	73069647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_73025637_73041128_73041245_73058979_73059498_73067064
Isoform_169968_12	chr7	+	3608	4	FSM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	-22	0	-11	0	multi-exon	FALSE	canonical	3	9	junction_1	7.93025150224688	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCTGTTGGAGTTTAT	NA	False	NA	33	True	AGTAAA	-30	NA	73025245	73069647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_73025637_73041128_73041245_73058979_73059498_73067064
Isoform_169969_7	chr7	+	2090	4	FSM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	-61	1557	-50	-1557	multi-exon	FALSE	canonical	3	9	junction_1	7.93025150224688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTGTTTTTGTGACAG	NA	False	NA	NA	False	NA	NA	NA	73025206	73068090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_73025637_73041128_73041245_73058979_73059498_73067064
Isoform_169973_24	chr7	+	3344	3	FSM	ENSMUSG00000070509.16	ENSMUST00000139780.3	3371	3	27	0	-22	0	multi-exon	FALSE	canonical	3	22	junction_1	3	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCTGTTGGAGTTTAT	NA	False	NA	33	True	AGTAAA	-30	NA	73041001	73069647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_73041245_73058979_73059498_73067064
Isoform_169975_65	chr7	+	2671	3	FSM	ENSMUSG00000078670.4	ENSMUST00000107456.4	2683	3	-11	23	-11	-23	multi-exon	FALSE	canonical	3	29	junction_2	1.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAACAAAAAATAACCT	NA	False	NA	NA	False	AATAAA	-9	NA	73390038	73426644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_73390577_73416234_73416367_73424643
Isoform_169978_4	chr7	+	5220	15	NIC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	3.75322990154847	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAGAATTTTGAAGA	NA	False	NA	NA	False	AAGAAA	-27	NA	75105306	75347089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_75105497_75184555_75184600_75219631_75219780_75229249_75229547_75235904_75236089_75252533_75252727_75258232_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049
Isoform_169979_15	chr7	+	2299	2	ISM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	34	6626	3	14	5prime_fragment	FALSE	canonical	3	36	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAGTGACTTATCGGG	NA	False	NA	NA	False	AATAAA	-32	NA	75498091	75517253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_75498222_75515084
Isoform_169980_16	chr7	+	2259	2	ISM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	76	6624	-11	16	5prime_fragment	FALSE	canonical	3	36	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTGACTTATCGGGTG	NA	False	NA	NA	False	AATAAA	-34	NA	75498133	75517255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_75498222_75515084
Isoform_169981_175	chr7	+	3354	3	FSM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	49	0	-5	0	multi-exon	FALSE	canonical	3	36	junction_1	5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTGGGTTCTGATTC	NA	False	NA	17	True	AATAAA	-18	NA	75498106	75523879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_75498222_75515084_75516890_75522445
Isoform_169982_11	chr7	+	2247	2	FSM	ENSMUSG00000055652.15	ENSMUST00000206019.2	2299	2	51	1	-5	-1	multi-exon	FALSE	canonical	3	14	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGGCTGAAGGAGAAGC	NA	False	NA	NA	False	AATAAA	-17	NA	75498139	75517238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_75498233_75515084
Isoform_169983_49	chr7	+	3369	3	FSM	ENSMUSG00000055652.15	ENSMUST00000092073.11	3385	3	21	-5	-5	4	multi-exon	FALSE	canonical	3	14	junction_1	16	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTCTGATTCTGCC	NA	False	NA	21	True	AATAAA	-22	NA	75498106	75523883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_75498233_75515084_75516890_75522445
Isoform_169987_10	chr7	+	2648	4	FSM	ENSMUSG00000030611.11	ENSMUST00000136001.8	548	4	-34	-2066	-19	0	multi-exon	FALSE	canonical	3	364	junction_2	42.7083130081252	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433083	78442737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384
Isoform_169988_200	chr7	+	817	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	238	1	1	-1	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78433104	78442736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
Isoform_169989_8	chr7	+	1023	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	33	0	33	0	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78432899	78442737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
Isoform_169990_5	chr7	+	3788	4	NIC	ENSMUSG00000030611.11	novel	1056	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	364	junction_2	43.6984617069704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433104	78442737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_78433172_78433320_78433429_78438422_78441688_78442389
Isoform_169991_4	chr7	+	2653	4	FSM	ENSMUSG00000030611.11	ENSMUST00000123706.8	924	4	24	-1753	-18	0	multi-exon	FALSE	canonical	3	70	junction_2	181.085615110643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433084	78442737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78433172_78433320_78433435_78438422_78438522_78440384
Isoform_169992_26	chr7	+	824	6	FSM	ENSMUSG00000030611.11	ENSMUST00000133553.8	825	6	1	0	1	0	multi-exon	FALSE	canonical	3	70	junction_2	143.488814895099	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433104	78442737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78433172_78433320_78433435_78438422_78438522_78440384_78440515_78441621_78441688_78442389
Isoform_169993_20	chr7	+	4915	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	42	-1	18	1	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTAATCTGATGGAATT	NA	False	NA	3	True	NA	NA	NA	78545716	78560958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
Isoform_169994_533	chr7	+	2108	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	21	2827	-3	1	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78545695	78558130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
Isoform_169999_737	chr7	+	1994	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	14	-1	-3	1	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78545695	78558130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
Isoform_17000_40	chr11	-	2035	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	328.11515593699	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710000	102690409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709885
Isoform_170000_30	chr7	+	4822	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	14	-2829	-3	1	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTAATCTGATGGAATT	NA	False	NA	3	True	NA	NA	NA	78545695	78560958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
Isoform_170005_30	chr7	+	2228	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	6	-4	6	1	multi-exon	FALSE	canonical	2	13	junction_1	306.901721511409	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78545762	78558130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78545950_78551977_78552579_78555590_78555792_78556891
Isoform_17002_27	chr11	-	2225	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	305.092096751129	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710000	102690409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102709795
Isoform_170023_6	chr7	+	6770	13	NIC	ENSMUSG00000030607.8	novel	7355	17	NA	NA	-10345	-6	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	4.46203117674252	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTATTTCTTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	78739153	78764841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
Isoform_170025_5	chr7	+	2748	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	8	4121	8	-4121	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAAGGGAGTGTTCTTT	2730	False	NA	NA	False	AAGAAA	-14	NA	78922954	79011135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
Isoform_170028_16	chr7	+	6820	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	30	27	-25	-27	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAGACAAAAAA	2752	False	NA	-5	True	NA	NA	NA	78922976	79015229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
Isoform_170029_445	chr7	+	4629	38	FSM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	16	0	16	0	multi-exon	FALSE	canonical	3	260	junction_14	37.7798783892034	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042075	79100012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
Isoform_170033_37	chr7	+	4643	38	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-1	0	combination_of_known_splicesites	TRUE	canonical	3	30	junction_31	65.5515454678326	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042058	79100012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094425_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
Isoform_170055_7	chr7	+	2005	4	FSM	ENSMUSG00000097023.9	ENSMUST00000182317.2	479	4	-195	-1331	8	-1	multi-exon	FALSE	canonical	2	3	junction_1	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTTCTTGTTTGTATA	NA	False	NA	NA	False	AATAAA	-15	NA	79164987	79182338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79165421_79173664_79173725_79177510_79177618_79180933
Isoform_170056_59	chr7	+	2102	6	ISM	ENSMUSG00000046591.11	ENSMUST00000206591.2	3655	20	-16	18213	0	7	5prime_fragment	FALSE	canonical	3	244	junction_2	18.3847763108502	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAAGGCAAATTTCCAT	1959	False	NA	NA	False	AATAAA	-24	NA	79309978	79325468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019
Isoform_170057_32	chr7	+	2000	7	NIC	ENSMUSG00000046591.11	novel	3655	20	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	91.3699744020005	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAAGGCAAATTTCCAT	1960	False	NA	NA	False	AATAAA	-24	NA	79309979	79325468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79325257
Isoform_170058_5	chr7	+	2027	7	NIC	ENSMUSG00000046591.11	novel	3655	20	NA	NA	9	7	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	91.3699744020005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAAGGCAAATTTCCAT	1933	False	NA	NA	False	AATAAA	-24	NA	79309952	79325468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79325257
Isoform_170060_232	chr7	+	7164	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	30	5	4	-5	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTATTACTTTCC	1954	False	NA	11	True	ATTAAA	-21	NA	79309973	79347891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
Isoform_170061_9	chr7	+	7273	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	-78	4	-78	-4	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTTATTACTTTCCC	1846	False	NA	12	True	ATTAAA	-22	NA	79309865	79347892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
Isoform_17007_623	chr11	-	1893	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	5	5	5	-5	multi-exon	FALSE	canonical	3	506	junction_2	138	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710000	102690409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_17008_86	chr11	-	2001	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	5	-103	5	103	multi-exon	FALSE	canonical	3	506	junction_2	138	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGTTTAAGATCTATCT	NA	False	NA	-5	True	NA	NA	NA	102710000	102690301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_170081_3	chr7	+	870	5	NIC	ENSMUSG00000039099.8	novel	2285	18	NA	NA	29137	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	5.09901951359278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGCGGTTCATCCTT	NA	False	NA	1	True	AATAAA	-16	NA	79422047	79435698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79422269_79425259_79425324_79426377_79426535_79426860_79427054_79435463
Isoform_170082_11	chr7	+	1446	2	FSM	ENSMUSG00000030543.11	ENSMUST00000107394.3	1944	2	492	6	492	-6	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAACTTGTTTGCTTCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	79460966	79463181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79461508_79462276
Isoform_170085_157	chr7	+	2285	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-30	4979	-10	5	5prime_fragment	FALSE	canonical	3	198	junction_1	67.6214955961983	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTGAGTGCTGTGTAAC	NA	False	NA	6	True	AATAAA	-14	NA	79674551	79736599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
Isoform_170086_283	chr7	+	2255	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-1	4980	-1	4	5prime_fragment	FALSE	canonical	3	198	junction_1	67.6214955961983	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTTGAGTGCTGTGTAA	NA	False	NA	5	True	AATAAA	-13	NA	79674580	79736598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
Isoform_170088_16	chr7	+	4526	6	FSM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-1	-919	-1	0	multi-exon	FALSE	canonical	2	5	junction_5	149.360503480673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79674580	79742497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79738282_79738381_79740082
Isoform_170089_70	chr7	+	4458	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	-11	1424	-11	0	multi-exon	TRUE	canonical	3	72	junction_4	112.192635676322	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79674550	79742497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
Isoform_17009_26	chr11	-	2078	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	-180	5	-149	-5	multi-exon	FALSE	canonical	3	506	junction_2	138	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710185	102690409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_170090_157	chr7	+	4426	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	19	1426	-1	-2	multi-exon	FALSE	canonical	3	72	junction_4	112.192635676322	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGACTGTACGTGCTTC	NA	False	NA	16	True	AATAAA	-16	NA	79674580	79742495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
Isoform_170096_53	chr7	+	2230	4	FSM	ENSMUSG00000048897.16	ENSMUST00000206039.2	2194	4	-31	-5	-31	5	multi-exon	FALSE	canonical	3	96	junction_1	115.519118186847	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTGAGTGCTGTGTAAC	NA	False	NA	6	True	AATAAA	-14	NA	79676103	79736599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181
Isoform_170097_19	chr7	+	2401	4	FSM	ENSMUSG00000048897.16	ENSMUST00000206039.2	2194	4	-202	-5	148	5	multi-exon	FALSE	canonical	3	96	junction_1	115.519118186847	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTGAGTGCTGTGTAAC	NA	False	NA	6	True	AATAAA	-14	NA	79675932	79736599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181
Isoform_1701_4	chr10	-	6520	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-61	-1977	-61	-2	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTCAGTTCCTTTATG	NA	False	NA	-4	True	AATAAA	-23	NA	14420841	14278328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
Isoform_170102_58	chr7	+	4400	5	FSM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	321	0	-29	0	multi-exon	FALSE	canonical	3	72	junction_4	128.705817661829	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79676105	79742497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79740082
Isoform_170103_16	chr7	+	4571	5	FSM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	148	2	148	-2	multi-exon	FALSE	canonical	3	72	junction_4	128.705817661829	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGACTGTACGTGCTTC	NA	False	NA	16	True	AATAAA	-16	NA	79675932	79742495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79740082
Isoform_17011_23	chr11	-	2711	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	4	-812	4	812	multi-exon	FALSE	canonical	3	506	junction_2	138	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTTTCTTTCCATCT	NA	False	NA	NA	False	CATAAA	-12	NA	102710001	102689592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_170114_52	chr7	+	3783	15	FSM	ENSMUSG00000030539.14	ENSMUST00000032754.9	3949	15	36	130	-1	-14	multi-exon	FALSE	canonical	3	35	junction_1	17.3394972033593	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGTGGCCCACATTC	NA	False	NA	14	True	AATAAA	-16	NA	79836624	79876145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
Isoform_170117_4	chr7	+	4009	15	FSM	ENSMUSG00000030539.14	ENSMUST00000032754.9	3949	15	-188	128	-188	-12	multi-exon	FALSE	canonical	3	35	junction_1	17.3394972033593	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGGCCCACATTCCT	NA	False	NA	16	True	AATAAA	-18	NA	79836400	79876147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
Isoform_170118_58	chr7	+	3593	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	152	15	57	-15	multi-exon	FALSE	canonical	3	56	junction_5	14.4283580075107	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGTGGCCCACATT	5769	False	NA	13	True	AATAAA	-15	NA	79848340	79876144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
Isoform_170121_59	chr7	+	1933	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	3	2253	3	-2253	multi-exon	FALSE	canonical	3	81	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTGTTGTTGTTTTC	NA	False	NA	8	True	AGTAAA	-11	NA	79882615	79889556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79882954_79887961
Isoform_170122_77	chr7	+	1909	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	27	2253	27	-2253	multi-exon	FALSE	canonical	3	81	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTGTTGTTGTTTTC	NA	False	NA	8	True	AGTAAA	-11	NA	79882639	79889556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79882954_79887961
Isoform_170125_10	chr7	+	2656	3	ISM	ENSMUSG00000045467.14	ENSMUST00000205270.2	2723	14	9344	-148	9344	-3	intron_retention	FALSE	canonical	2	15	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGCGTGCTGTACCTCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	79906479	79910566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_79906779_79907924_79908106_79908390
Isoform_170127_504	chr7	+	1313	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	5	-1	0	1	multi-exon	FALSE	canonical	3	448	junction_2	14	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGCTTGGTTCTCTT	NA	False	NA	14	True	AATAAA	-14	NA	79910967	79915123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79911172_79911568_79911680_79914125
Isoform_170128_42	chr7	+	1712	2	FSM	ENSMUSG00000047084.9	ENSMUST00000138005.2	1709	2	-2	-1	-2	1	multi-exon	FALSE	canonical	3	448	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGCTTGGTTCTCTT	NA	False	NA	14	True	AATAAA	-14	NA	79910965	79915123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79911680_79914125
Isoform_17013_28	chr11	-	2009	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	-112	6	-81	-6	multi-exon	FALSE	canonical	3	506	junction_2	138	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710117	102690410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_170130_189	chr7	+	2548	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	22	4	-8	2	multi-exon	FALSE	canonical	3	97	junction_6	14.9188576657057	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919418	79941323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
Isoform_170132_3	chr7	+	3035	22	NIC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	-6	2	intron_retention	FALSE	canonical	3	97	junction_6	14.7824741484676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919420	79941323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
Isoform_170145_163	chr7	+	2954	15	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	61	junction_13	288.475240333922	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACACTGTTTTGTCT	NA	False	NA	11	True	AATAAA	-21	NA	79944227	79966000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
Isoform_170148_813	chr7	+	2912	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	1	-1	1	1	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACACTGTTTTGTCT	NA	False	NA	11	True	AATAAA	-21	NA	79944227	79966000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
Isoform_170152_722	chr7	+	3038	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-25	-5	1	0	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944227	79966007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
Isoform_170167_68	chr7	+	859	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	37	614	-3	-2	multi-exon	FALSE	canonical	3	96	junction_1	13.490737563232	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGTTCTTCCTTCTC	NA	False	NA	15	True	AATAAA	-20	NA	79992888	79995848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
Isoform_170168_4	chr7	+	1008	4	NNC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	46.7784375778224	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATTGCTGTTCTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	79992883	79995845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_79992998_79993286_79993343_79993463_79993705_79995248
Isoform_170169_3	chr7	+	1065	4	NIC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	53.8537113133554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGTTCTTCCTTCTC	NA	False	NA	15	True	AATAAA	-20	NA	79992888	79995848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79993204_79993286_79993343_79993463_79993705_79995395
Isoform_170170_15	chr7	+	2268	3	FSM	ENSMUSG00000038797.14	ENSMUST00000147125.2	1582	3	-32	-654	1	5	multi-exon	FALSE	canonical	2	3	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTGTTTGTCGTCATTT	2889	False	NA	NA	False	NA	NA	NA	80510668	80526290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_80510826_80512915_80513420_80524683
Isoform_170171_83	chr7	+	4103	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-10	3204	-10	507	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTCTGGAGCAGTGTC	NA	False	NA	18	True	AATAAA	-29	NA	80643418	80691708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
Isoform_170172_26	chr7	+	4324	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-245	3218	-245	493	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGGCCACTGTGC	NA	False	NA	4	True	AATAAA	-15	NA	80643183	80691694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
Isoform_170173_59	chr7	+	4845	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	7	2445	7	1266	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGCTCTTGTATTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	80643435	80692467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
Isoform_170174_10	chr7	+	5098	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-246	2445	-246	1266	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGCTCTTGTATTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	80643182	80692467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
Isoform_170176_4	chr7	+	4728	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-647	3216	-647	495	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGGCCACTGTGCTC	NA	False	NA	6	True	AATAAA	-17	NA	80642781	80691696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
Isoform_170179_3	chr7	+	3120	9	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	36053	3	-1178	-3	3prime_fragment	FALSE	canonical	3	11	junction_1	5.1234753829798	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCACGGTGTGATGAT	NA	False	NA	19	True	AATAAA	-31	NA	80743400	80755357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_80743933_80744654_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
Isoform_17018_99	chr11	-	1811	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	28	-1592	-3	-5	multi-exon	FALSE	canonical	3	62	junction_2	360	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710008	102690409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102692022_102693666_102693743_102709885
Isoform_170180_5	chr7	+	2663	8	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	37235	0	4	0	3prime_fragment	FALSE	canonical	3	12	junction_3	5.00611870512435	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGGTGTGATGATTAT	NA	False	NA	22	True	AATAAA	-34	NA	80744582	80755360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
Isoform_170181_6	chr7	+	2885	18	FSM	ENSMUSG00000025726.12	ENSMUST00000026820.11	2846	18	-39	0	-39	0	multi-exon	FALSE	canonical	0	0	junction_4	56.988677318925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80764507	80820164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_80764626_80765270_80765383_80766232_80766322_80767348_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
Isoform_170183_358	chr7	+	1981	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27008	0	27008	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80791605	80820164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
Isoform_170184_51	chr7	+	2027	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	26962	0	26962	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	9971	False	NA	11	True	AATAAA	-20	NA	80791559	80820164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
Isoform_170186_19	chr7	+	1856	8	NIC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	27008	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	42.0490481340493	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGTACAGTGTGT	NA	False	NA	12	True	AATAAA	-21	NA	80791605	80820165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_80791793_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
Isoform_170196_162	chr7	+	4089	22	FSM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	-288	1	-288	-1	multi-exon	FALSE	canonical	3	151	junction_8	20.0953509362663	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTTGTTGCCATTTCT	819	False	NA	6	True	ATTAAA	-17	NA	80863055	80984280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
Isoform_170198_45	chr7	+	4131	22	FSM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	-329	0	-329	0	multi-exon	FALSE	canonical	3	151	junction_8	20.0953509362663	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTGTTGCCATTTCTT	778	False	NA	7	True	ATTAAA	-18	NA	80863014	80984281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
Isoform_1702_3	chr10	-	6872	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-409	-1981	214	2	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTTCCTTTATGAGGG	NA	False	NA	0	True	AATAAA	-27	NA	14421189	14278324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
Isoform_17020_15	chr11	-	1917	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	32	-1702	1	105	multi-exon	FALSE	canonical	3	62	junction_2	360	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTAAGATCTATCTAT	NA	False	NA	-3	True	NA	NA	NA	102710004	102690299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102692022_102693666_102693743_102709885
Isoform_170209_23	chr7	+	732	4	FSM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	-8	1	0	-1	multi-exon	FALSE	canonical	3	35	junction_1	29.9777695412228	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAAAATTTTTTGGGTA	NA	False	NA	3	True	AATAAA	-8	NA	81173310	81181241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81173425_81178534_81178689_81179094_81179276_81180958
Isoform_170210_12	chr7	+	788	4	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	41.2148840428633	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGTATTATGTTTT	NA	False	NA	12	True	AATAAA	-17	NA	81173310	81181250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_81173472_81178534_81178689_81179094_81179276_81180958
Isoform_170211_4	chr7	+	5852	3	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	2	7	intron_retention	FALSE	canonical	3	93	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGTATTATGTTTTAGT	NA	False	NA	15	True	AATAAA	-20	NA	81173312	81181253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_81178689_81179094_81179276_81180958
Isoform_170212_4	chr7	+	3093	10	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	-14	1	intron_retention	FALSE	canonical	2	4	junction_2	20.9961783706664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTTTCCAGAGGCCT	6944	False	NA	NA	False	ATTAAA	-16	NA	81220999	81246585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_81221658_81224293_81224451_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
Isoform_170213_5	chr7	+	2733	10	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	-13	1	intron_retention	FALSE	canonical	2	4	junction_2	20.9961783706664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACCTTAAAAATTTTA	6945	False	NA	-62	True	AATAAA	-15	NA	81221000	81246226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_81221658_81224293_81224451_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
Isoform_170216_75	chr7	+	2717	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	-6	358	-6	1	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACCTTAAAAATTTTA	6978	False	NA	-62	True	AATAAA	-15	NA	81221033	81246226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
Isoform_170217_22	chr7	+	2797	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	-19	291	7	68	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTATTATGAGGAAAT	6965	False	NA	5	True	ACTAAA	-15	NA	81221020	81246293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
Isoform_170219_13	chr7	+	3076	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	-6	-1	-6	1	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTTTCCAGAGGCCT	6978	False	NA	NA	False	ATTAAA	-16	NA	81221033	81246585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
Isoform_17022_32	chr11	-	1864	3	FSM	ENSMUSG00000034520.15	ENSMUST00000092567.11	1890	3	20	6	20	-6	multi-exon	FALSE	canonical	3	30	junction_2	376	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710506	102690410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102692022_102693666_102693743_102710329
Isoform_170221_3	chr7	+	2852	11	NNC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	-6	1	intron_retention	FALSE	canonical	1	2	junction_5	26.1505258073332	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACCTTAAAAATTTTA	6978	False	NA	-62	True	AATAAA	-15	NA	81221033	81246226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81238165_81238301_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
Isoform_170223_442	chr7	+	1422	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	30	0	30	0	multi-exon	FALSE	canonical	3	441	junction_1	195	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAGTTTTGACAGCCC	NA	False	NA	NA	False	AATAAA	-30	NA	81412702	81419239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81412805_81417274_81417472_81418116
Isoform_170229_6	chr7	+	1806	10	FSM	ENSMUSG00000038623.10	ENSMUST00000041890.8	2226	10	423	-3	273	3	multi-exon	FALSE	canonical	3	11	junction_7	3.33703498170693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTAATTTTGAAGCAT	NA	False	NA	NA	False	AATAAA	-28	NA	81509171	81533822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81509289_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
Isoform_170230_4	chr7	+	2534	10	FSM	ENSMUSG00000038623.10	ENSMUST00000041890.8	2226	10	65	-373	46	10	multi-exon	TRUE	canonical	3	11	junction_7	3.33703498170693	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGACTTAACAGCCTGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	81508813	81534192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81509289_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
Isoform_170231_3	chr7	+	1723	9	NIC	ENSMUSG00000038623.10	novel	2226	10	NA	NA	255	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.75925291729789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATTTTGAAGCATTTT	NA	False	NA	NA	False	AATAAA	-31	NA	81509153	81533825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_81509289_81512897_81513002_81514994_81515093_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
Isoform_170233_151	chr7	+	1587	9	FSM	ENSMUSG00000030638.14	ENSMUST00000032874.14	1647	9	51	9	5	-9	multi-exon	FALSE	canonical	3	252	junction_3	40.04040927613	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAAAAGACTGGTTATT	NA	False	NA	8	True	AATAAA	-15	NA	81824594	81956618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_170234_43	chr7	+	1618	9	FSM	ENSMUSG00000030638.14	ENSMUST00000032874.14	1647	9	24	5	-22	-5	multi-exon	FALSE	canonical	3	252	junction_3	40.04040927613	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGACTGGTTATTTTCA	NA	False	NA	12	True	AATAAA	-19	NA	81824567	81956622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_170237_32	chr7	+	1582	9	FSM	ENSMUSG00000030638.14	ENSMUST00000177895.8	1486	9	-105	9	3	-9	multi-exon	FALSE	canonical	3	79	junction_3	89.2394951801051	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAAAAGACTGGTTATT	NA	False	NA	8	True	AATAAA	-15	NA	81824592	81956618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_170238_11	chr7	+	4011	8	NIC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	1	-9	intron_retention	FALSE	canonical	3	279	junction_1	31.6311652052987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAAAAGACTGGTTATT	NA	False	NA	8	True	AATAAA	-15	NA	81824590	81956618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_81824768_81909339_81909409_81917487_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_170240_3	chr7	+	1573	9	NIC	ENSMUSG00000030638.14	novel	1486	9	NA	NA	4	-10	combination_of_known_junctions	FALSE	canonical	2	15	junction_2	130.244961514832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	NA	False	NA	7	True	AATAAA	-14	NA	81824593	81956617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_81824768_81909339_81909409_81917494_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_170241_7	chr7	+	1541	8	NIC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	-22	-9	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	114.240884064492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAAAAGACTGGTTATT	NA	False	NA	8	True	AATAAA	-15	NA	81824567	81956618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_81824768_81909339_81909409_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_170244_5	chr7	+	2473	15	FSM	ENSMUSG00000038563.15	ENSMUST00000125245.8	2453	15	-20	0	-5	0	multi-exon	FALSE	canonical	3	42	junction_1	27.9482028190781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCTACTGGTTTGCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	82297816	82347892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086
Isoform_170246_65	chr7	+	3591	20	FSM	ENSMUSG00000038563.15	ENSMUST00000179489.8	3608	20	-5	22	-5	-22	multi-exon	FALSE	canonical	3	42	junction_1	25.8006420500325	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCATCAGAGAACATAACTT	NA	False	NA	16	True	AATAAA	-21	NA	82297816	82427038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
Isoform_170247_6	chr7	+	1059	5	NNC	ENSMUSG00000038563.15	novel	755	7	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	64.6935081750866	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGTGGCCTGTGGCTC	NA	False	NA	NA	False	AATAAA	-14	NA	82297815	82308232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82307474
Isoform_170252_162	chr7	+	3603	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	-11	18	1	-18	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGAACATAACTTCCAA	NA	False	NA	20	True	AATAAA	-25	NA	82297837	82427042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
Isoform_170253_5	chr7	+	4040	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	9	-439	9	439	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTCTCTGCCATTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	82297857	82427499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
Isoform_170254_12	chr7	+	1095	5	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.1139542868376	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGTGGCCTGTGGCTCA	NA	False	NA	NA	False	AATAAA	-15	NA	82297809	82308233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82307474
Isoform_17026_46	chr11	-	2006	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_2	340.826446548191	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710013	102690409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102692022_102693666_102693743_102700471_102700572_102709795
Isoform_170261_9	chr7	+	3400	2	FSM	ENSMUSG00000057706.8	ENSMUST00000082237.7	3355	2	5	-50	5	50	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCACTGTTGTATGG	NA	False	NA	NA	False	AATAAA	-9	NA	82516545	82520773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_82517136_82517963
Isoform_170264_182	chr7	+	2434	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	43	6	2	-6	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTATCTTGAGTTCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	83281209	83291530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
Isoform_170266_6	chr7	+	1212	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	19	1252	19	-1252	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACAGGATAAGCCTTAA	NA	False	NA	-3	True	NA	NA	NA	83281185	83290284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
Isoform_170268_5	chr7	+	2931	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	41	-489	0	489	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCAGTTGTTTGTTTGTT	NA	False	NA	NA	False	AATATA	-28	NA	83281207	83292025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
Isoform_170271_1871	chr7	+	1881	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	255	2356	-75	1096	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	1871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGATAGGTATATTC	NA	False	NA	20	True	AATAAA	-15	NA	83541462	83548384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_83541684_83544737_83544971_83546957
Isoform_170272_46	chr7	+	2119	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	22	2351	20	1101	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATAGGTATATTCTGTCC	NA	False	NA	25	True	AATAAA	-20	NA	83541229	83548389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_83541684_83544737_83544971_83546957
Isoform_170274_113	chr7	+	2088	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	52	2352	50	1100	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATAGGTATATTCTGTC	NA	False	NA	24	True	AATAAA	-19	NA	83541259	83548388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_83541684_83544737_83544971_83546957
Isoform_170291_3	chr7	+	3710	18	FSM	ENSMUSG00000030562.18	ENSMUST00000032781.14	3753	18	33	10	33	-10	multi-exon	FALSE	canonical	2	6	junction_2	3.12706679058871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAAATGGTGTCTGT	NA	False	NA	NA	False	AATAAA	-5	NA	86895889	87047908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_86896111_86896695_86896792_86944991_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
Isoform_170292_7	chr7	+	3730	18	FSM	ENSMUSG00000030562.18	ENSMUST00000126887.8	3749	18	10	9	10	-9	multi-exon	FALSE	canonical	3	4	junction_2	3.42896273924463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAAATGGTGTCTGTG	NA	False	NA	NA	False	AATAAA	-6	NA	86895866	87047909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_86896111_86896695_86896792_86944995_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
Isoform_170293_7	chr7	+	3212	4	FSM	ENSMUSG00000030560.18	ENSMUST00000131108.9	3220	4	1	7	1	-7	multi-exon	FALSE	canonical	0	0	junction_3	178.66417908716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACCTCACTGTGGCA	NA	False	NA	NA	False	AATAAA	-24	NA	87927342	87940598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_87927583_87930594_87930741_87936101_87936187_87937857
Isoform_170295_430	chr7	+	1865	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	51	577	-2	-577	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGTCTTTCTATGTGT	NA	False	NA	12	True	AATAAA	-17	NA	87927343	87959519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
Isoform_170296_170	chr7	+	1908	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	9	576	9	-576	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTCTTTCTATGTGTG	NA	False	NA	13	True	AATAAA	-18	NA	87927301	87959520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
Isoform_17030_19	chr11	-	1912	4	NNC	ENSMUSG00000034520.15	novel	247	3	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	347.835529461203	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCTGTTAAAGGGTAA	NA	False	NA	-11	True	ATTAAA	-19	NA	102710007	102690407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102692022_102693666_102693743_102700471_102700572_102709885
Isoform_170305_27	chr7	+	1428	3	FSM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	36	113	36	-113	multi-exon	FALSE	canonical	3	30	junction_1	4.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTTTCTGATATTACC	NA	False	NA	5	True	AATAAA	-18	NA	88079516	88140667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_88079812_88099688_88099970_88139815
Isoform_170306_9	chr7	+	1503	3	FSM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	-41	115	-41	-115	multi-exon	FALSE	canonical	3	30	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGTTTCTGATATTA	NA	False	NA	3	True	AATAAA	-16	NA	88079439	88140665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_88079812_88099688_88099970_88139815
Isoform_170307_24	chr7	+	2984	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	4	3732	4	-3732	multi-exon	FALSE	canonical	3	13	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGTATACTCAATTGAC	NA	False	NA	NA	False	ATTAAA	-20	NA	89053566	89058610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_89054180_89056239
Isoform_170310_9	chr7	+	6692	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	25	3	25	-3	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGTGTGTGCATTGGTG	NA	False	NA	NA	False	AATAAA	-13	NA	89053587	89062339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_89054180_89056239
Isoform_170311_3	chr7	+	3362	20	FSM	ENSMUSG00000039361.12	ENSMUST00000208742.2	3361	20	-4	3	-4	1	multi-exon	FALSE	canonical	3	16	junction_12	48.3518384036048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTTACGGTGTTCTG	NA	False	NA	14	True	AATAAA	-15	NA	89779707	89858135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
Isoform_170312_14	chr7	+	3628	20	NIC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	45.9396207370349	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACGGTGTTCTGGTTTG	NA	False	NA	19	True	AATAAA	-20	NA	89779431	89858140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
Isoform_170314_3	chr7	+	3792	20	NIC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	45.9396207370349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATAATGTCTGAATT	NA	False	NA	NA	False	AATAAA	-25	NA	89779440	89858313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
Isoform_170317_5	chr7	+	3184	19	NIC	ENSMUSG00000039361.12	novel	3511	20	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_13	32.2637663220516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89779734	89858134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
Isoform_170318_82	chr7	+	3466	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	18	5	1	1	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTTACGGTGTTCTG	NA	False	NA	14	True	AATAAA	-15	NA	89779438	89858135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
Isoform_170319_15	chr7	+	3972	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	31	-514	14	343	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTGTGTTTTAAATTA	NA	False	NA	8	True	ATTAAA	-19	NA	89779451	89858654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
Isoform_170322_16	chr7	+	3642	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	18	-171	1	0	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGAATAATGTCTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	89779438	89858311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
Isoform_170326_21	chr7	+	2682	3	FSM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-864	-927	76	641	multi-exon	FALSE	canonical	3	58	junction_1	21.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTCTTACTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	90092012	90095953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90093296_90093507_90093586_90094632
Isoform_170327_6	chr7	+	2093	3	FSM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-916	-286	24	0	multi-exon	FALSE	canonical	3	58	junction_1	21.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	90091960	90095312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90093296_90093507_90093586_90094632
Isoform_170328_7	chr7	+	3679	3	FSM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-888	-1900	52	-3	multi-exon	FALSE	canonical	3	58	junction_1	21.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATTAGTGTCTTAAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	90091988	90096926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90093296_90093507_90093586_90094632
Isoform_170329_5	chr7	+	1997	4	FSM	ENSMUSG00000051451.7	ENSMUST00000207252.2	873	4	-1127	3	31	-3	multi-exon	FALSE	canonical	3	27	junction_3	30.3424894606007	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATTAGTGTCTTAAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	90091967	90096926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90093296_90093507_90093586_90094632_90094702_90096404
Isoform_170330_7	chr7	+	1925	4	FSM	ENSMUSG00000051451.7	ENSMUST00000207252.2	873	4	-1052	0	106	0	multi-exon	FALSE	canonical	3	27	junction_3	30.3424894606007	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGTGTCTTAAAATAGA	NA	False	NA	NA	False	AATAAA	-15	NA	90092042	90096929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90093296_90093507_90093586_90094632_90094702_90096404
Isoform_170333_22	chr7	+	2277	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-897	0	52	0	multi-exon	FALSE	canonical	3	101	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	90091988	90095312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90093586_90094632
Isoform_170334_22	chr7	+	3859	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-862	-1617	87	0	multi-exon	FALSE	canonical	3	101	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGTGTCTTAAAATAGA	NA	False	NA	NA	False	AATAAA	-15	NA	90092023	90096929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90093586_90094632
Isoform_170335_45	chr7	+	2881	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-862	-639	87	639	multi-exon	FALSE	canonical	3	101	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGTTGTCTTACTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	90092023	90095951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90093586_90094632
Isoform_170336_13	chr7	+	2154	3	FSM	ENSMUSG00000051451.7	ENSMUST00000209102.2	789	3	-1368	3	86	-3	multi-exon	FALSE	canonical	3	27	junction_2	37	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATTAGTGTCTTAAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	90092022	90096926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90093586_90094632_90094702_90096404
Isoform_170338_52	chr7	+	1229	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	367	0	367	0	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210723	92231502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
Isoform_170341_16	chr7	+	1556	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	40	0	40	0	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210396	92231502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
Isoform_170346_17	chr7	+	1494	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	69	7893	5	-2	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCATGAGTCAGCAGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	92390879	92485850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
Isoform_170348_4	chr7	+	1574	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	-12	7894	-12	-3	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGAGTCAGCAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	92390798	92485849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
Isoform_170350_176	chr7	+	2348	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	45	574	2	-5	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCATTTATTGAAAAAGTA	NA	False	NA	97	True	AATAAA	-19	NA	92524504	92583217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
Isoform_170353_7	chr7	+	3093	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	-700	574	82	-5	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCATTTATTGAAAAAGTA	NA	False	NA	97	True	AATAAA	-19	NA	92523759	92583217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
Isoform_170360_6	chr7	+	2536	3	FSM	ENSMUSG00000048078.17	ENSMUST00000129445.8	2527	3	-6	-3	-6	3	multi-exon	FALSE	canonical	2	13	junction_1	5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95859346	96088176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_95859617_96004562_96004619_96085966
Isoform_170361_12	chr7	+	2207	14	NIC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	3	523	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	27.7429024987159	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAGAAGTTATTTTTAA	7361	False	NA	9	True	ATTAAA	-21	NA	96600730	96712702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_96600863_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
Isoform_170363_227	chr7	+	2476	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	39	1263	-18	523	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAGAAGTTATTTTTAA	7381	False	NA	9	True	ATTAAA	-21	NA	96600750	96712702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
Isoform_170364_9	chr7	+	3736	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	39	3	-18	-3	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATACTGTTTGCGCTT	7381	False	NA	NA	False	ATTAAA	-20	NA	96600750	96713962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
Isoform_170366_11	chr7	+	3026	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	39	713	-18	-713	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTTTTTAATTTAATTT	7381	False	NA	NA	False	NA	NA	NA	96600750	96713252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
Isoform_170368_5	chr7	+	2336	13	NIC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	-20	519	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	31.5571571385425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTATGAAAGAAGTTATTT	7379	False	NA	5	True	ATTAAA	-17	NA	96600748	96712698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96706654_96706753_96708992_96709020_96711775
Isoform_170369_3	chr7	+	5324	10	FSM	ENSMUSG00000004508.7	ENSMUST00000004622.7	6168	10	154	690	-36	-690	multi-exon	FALSE	canonical	0	0	junction_1	1.33333333333333	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCAGAGTAGACTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	96730946	96957463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_96731114_96872679_96872981_96921008_96921250_96948034_96948610_96949505_96949577_96950577_96950843_96951575_96951667_96952230_96952337_96953356_96953483_96954082
Isoform_170371_7	chr7	+	986	8	ISM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	15	8308	15	-7772	5prime_fragment	FALSE	canonical	3	115	junction_7	14.6175739911846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGTGTTTTGTGCGTG	NA	False	NA	NA	False	NA	NA	NA	97020827	97033084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892
Isoform_170372_80	chr7	+	1988	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	23	28	23	-28	multi-exon	FALSE	canonical	3	93	junction_8	19.8289560996034	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCAAAGTGTTTTGGGT	NA	False	NA	35	True	TATAAA	-24	NA	97020835	97041364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
Isoform_170374_6	chr7	+	1960	13	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	17	-28	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	36.0380778560061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCAAAGTGTTTTGGGT	NA	False	NA	35	True	TATAAA	-24	NA	97020829	97041364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
Isoform_170375_3	chr7	+	4961	12	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	13	-26	intron_retention	TRUE	canonical	3	13	junction_8	36.8357982546578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAAAGTGTTTTGGGTCC	NA	False	NA	37	True	TATAAA	-26	NA	97020825	97041366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
Isoform_170376_5	chr7	+	5326	13	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	18	-35	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	47.0841445357847	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATCAAATAGCAAAGTGT	NA	False	NA	28	True	TATAAA	-17	NA	97020830	97041357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_97020940_97022875_97022955_97023933_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
Isoform_170378_1103	chr7	+	600	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	75	8	-25	-8	multi-exon	FALSE	canonical	3	2164	junction_2	233	1103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATCTGTTCCTTTCCT	NA	False	NA	13	True	ATTAAA	-12	NA	97049284	97057001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97049565_97056072_97056217_97056825
Isoform_170379_975	chr7	+	3189	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	55	-4	-2	3	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	988	False	NA	29	True	AATAAA	-17	NA	97130217	97190605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
Isoform_170380_35	chr7	+	3218	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	25	-3	-22	2	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	958	False	NA	28	True	AATAAA	-16	NA	97130187	97190604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
Isoform_170381_31	chr7	+	3052	22	NIC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_20	102.131723224906	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	980	False	NA	28	True	AATAAA	-16	NA	97130209	97190604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97187106_97187228_97190218
Isoform_170384_161	chr7	+	3194	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	91.9439732384675	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	980	False	NA	29	True	AATAAA	-17	NA	97130209	97190605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_97130358_97134126_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
Isoform_170396_3	chr7	+	4993	17	NIC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	44.5132968196021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCATAGATGATGATTAAC	NA	False	NA	11	True	ATTAAA	-24	NA	97229091	97335631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_97229313_97266049_97266142_97280615_97280827_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
Isoform_170397_3	chr7	+	890	5	ISM	ENSMUSG00000035623.15	ENSMUST00000156060.8	5695	15	-6	33084	2	-7578	5prime_fragment	FALSE	canonical	3	100	junction_2	11.247221879202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAACAAAGAAGCAAA	NA	False	NA	NA	False	TATAAA	-10	NA	97229097	97302543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259
Isoform_1704_603	chr10	-	1313	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	83	578	-12	22	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTGGAGATCCTGACTT	NA	False	NA	-10	True	AATAAA	-17	NA	14581221	14531076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
Isoform_170403_9	chr7	+	5147	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-8	5985	0	185	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTGAAATGAGTGGTCT	NA	False	NA	NA	False	AATAAA	-35	NA	97229095	97336000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
Isoform_170404_130	chr7	+	4751	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	17	6356	7	2	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCATAGATGATGATTA	NA	False	NA	9	True	ATTAAA	-22	NA	97229120	97335629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
Isoform_170407_20	chr7	+	5058	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-297	6363	-289	-5	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTCATGGCATAGATG	NA	False	NA	2	True	ATTAAA	-15	NA	97228806	97335622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
Isoform_170408_3	chr7	+	5122	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-65	6067	-57	103	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGCTAACAGAATCTTT	NA	False	NA	NA	False	AGTAAA	-27	NA	97229038	97335918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
Isoform_170409_4	chr7	+	4941	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-332	6515	-324	-157	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTGACTTTATATT	NA	False	NA	13	True	NA	NA	NA	97228771	97335470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
Isoform_170415_1846	chr7	+	1466	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	38	0	-23	0	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	1846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	97345878	97368086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
Isoform_170416_20	chr7	+	1553	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	-53	4	-53	-4	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATATCGCTGTGATTTTG	NA	False	NA	7	True	AATAAA	-13	NA	97345787	97368082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
Isoform_170418_44	chr7	+	1522	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	38	-56	-23	56	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTACATGTATGTGT	NA	False	NA	67	True	AGTAAA	-29	NA	97345878	97368142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
Isoform_170427_69	chr7	+	3290	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	2	-498	2	0	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97437749	97561588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170428_79	chr7	+	2198	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	-30	626	-30	-25	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTCTTCTCCTTTCCTT	NA	False	NA	20	True	AATAAA	-29	NA	97437717	97560464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170429_59	chr7	+	3324	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	-30	-500	-30	2	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTGTGTCTTTTTTCCC	NA	False	NA	21	True	AATAAA	-22	NA	97437717	97561590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170431_80	chr7	+	2166	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	2	626	2	-25	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTCTTCTCCTTTCCTT	NA	False	NA	20	True	AATAAA	-29	NA	97437749	97560464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170436_22	chr7	+	2156	15	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	2	-32	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	51.4204358644479	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCATGTCCTCTTCTCC	NA	False	NA	13	True	AATAAA	-22	NA	97437749	97560457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_97438182_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170439_21	chr7	+	3326	15	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-37	0	combination_of_known_splicesites	TRUE	canonical	3	45	junction_1	51.4204358644479	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97437710	97561588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_97438182_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170442_8	chr7	+	3523	16	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	74.1309352130105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97437720	97561588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_97438182_97480061_97480266_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170443_10	chr7	+	2389	16	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-25	-33	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	74.1309352130105	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCATGTCCTCTTCTC	NA	False	NA	12	True	AATAAA	-21	NA	97437722	97560456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_97438182_97480061_97480266_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170446_6	chr7	+	2158	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	-10	917	-10	182	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAATCTCAGCCATCCC	NA	False	NA	3	True	AATAAA	-14	NA	97492131	97560671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170448_14	chr7	+	3026	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	37	2	37	-2	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGAAGTGTGTCTTTTT	NA	False	NA	17	True	AATAAA	-18	NA	97492178	97561586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170451_6	chr7	+	3014	15	NIC	ENSMUSG00000030774.14	novel	3065	15	NA	NA	37	-11	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	60.5657426576565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTCTACAGGAAGTG	NA	False	NA	8	True	AATAAA	-9	NA	97492178	97561577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_97492349_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170452_7	chr7	+	1907	15	NIC	ENSMUSG00000030774.14	novel	3065	15	NA	NA	28	-28	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	60.5657426576565	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTCTTCTCCTTTC	NA	False	NA	17	True	AATAAA	-26	NA	97492169	97560461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_97492349_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_170454_52	chr7	+	3793	6	FSM	ENSMUSG00000030753.16	ENSMUST00000126356.8	1123	6	25	-2695	25	0	multi-exon	FALSE	canonical	3	28	junction_2	87.2958189147682	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352334	98367269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
Isoform_170456_7	chr7	+	3900	6	FSM	ENSMUSG00000030753.16	ENSMUST00000126356.8	1123	6	-82	-2695	-82	0	multi-exon	FALSE	canonical	3	28	junction_2	87.2958189147682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352227	98367269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
Isoform_170460_318	chr7	+	3725	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	-4	2	-4	-2	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGGTGAGGTGTTTT	NA	False	NA	10	True	AATAAA	-17	NA	98352305	98367267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
Isoform_170463_12	chr7	+	3914	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	-4	-187	-4	187	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGACTGGGGTGGATC	NA	False	NA	NA	False	ATTAAA	-16	NA	98352305	98367456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
Isoform_170467_23	chr7	+	3780	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	-60	3	-60	-3	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCAGGTGAGGTGTTT	NA	False	NA	9	True	AATAAA	-16	NA	98352249	98367266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
Isoform_170470_21	chr7	+	3778	5	FSM	ENSMUSG00000030753.16	ENSMUST00000153566.2	607	5	-224	-2947	1	-2	multi-exon	FALSE	canonical	3	19	junction_4	84.5192285814299	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGGTGAGGTGTTTT	NA	False	NA	10	True	AATAAA	-17	NA	98352310	98367267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362161_98364188
Isoform_170472_3	chr7	+	1764	6	NIC	ENSMUSG00000015957.13	novel	3451	7	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	8.48528137423857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGTGTGTGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	98484317	98503019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_98484556_98488214_98488398_98495580_98495817_98496380_98496495_98499433_98499727_98502319
Isoform_170474_3	chr7	+	1697	5	FSM	ENSMUSG00000015957.13	ENSMUST00000167303.8	1792	5	156	-61	103	1	multi-exon	FALSE	canonical	3	14	junction_3	5.21416340365355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGTGTGTGAAATAAA	1310	False	NA	NA	False	NA	NA	NA	98488207	98503019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98488398_98495580_98495817_98496380_98496659_98499433_98499727_98502319
Isoform_170476_67	chr7	+	4043	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	877	0	20	0	multi-exon	FALSE	canonical	3	32	junction_2	24	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTCTTGATCGTATTT	NA	False	NA	6	True	AATAAA	-16	NA	98917572	98969559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98918521_98964895_98965110_98966678
Isoform_170479_7	chr7	+	2502	4	FSM	ENSMUSG00000055407.15	ENSMUST00000208924.2	2906	4	404	0	-30	0	multi-exon	FALSE	canonical	0	0	junction_3	32.8768746825012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	False	NA	13	True	AATAAA	-19	NA	98917582	98986344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98918521_98964895_98965110_98966678_98966876_98985191
Isoform_170480_98	chr7	+	2314	3	FSM	ENSMUSG00000055407.15	ENSMUST00000107100.3	2335	3	21	0	21	0	multi-exon	FALSE	canonical	3	44	junction_2	18	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	False	NA	13	True	AATAAA	-19	NA	98917573	98986344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_98918521_98964895_98965110_98985191
Isoform_170481_12	chr7	+	3717	18	FSM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	1	893	1	-1	multi-exon	FALSE	canonical	1	1	junction_3	3.03839331062234	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	99030621	99110191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
Isoform_170482_3	chr7	+	2463	12	ISM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	60391	893	-115	-1	3prime_fragment	FALSE	canonical	1	1	junction_10	3.44496278572662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	99091011	99110191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
Isoform_170483_4	chr7	+	7076	16	FSM	ENSMUSG00000018909.16	ENSMUST00000098266.9	7132	16	54	2	54	-2	multi-exon	FALSE	canonical	3	7	junction_3	4.9486249493055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGCTGTGTTTTCATT	NA	False	NA	14	True	ATTAAA	-19	NA	99184726	99255976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_99185006_99231467_99231499_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
Isoform_170485_3	chr7	+	7130	16	FSM	ENSMUSG00000018909.16	ENSMUST00000098266.9	7132	16	-1	3	-1	-3	multi-exon	FALSE	canonical	3	7	junction_3	4.9486249493055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGGCTGTGTTTTCAT	NA	False	NA	13	True	ATTAAA	-18	NA	99184671	99255975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_99185006_99231467_99231499_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
Isoform_170486_5	chr7	+	2259	14	FSM	ENSMUSG00000030729.18	ENSMUST00000084935.11	8834	14	294	6281	0	-4823	multi-exon	FALSE	canonical	2	3	junction_8	2.32557176274323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATATTTGGATATG	NA	False	NA	NA	False	AATAGA	-15	NA	99876894	99921793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_99877242_99899498_99899667_99901391_99901499_99902439_99902525_99904740_99904825_99909090_99909285_99910806_99910997_99911272_99911371_99912117_99912296_99915871_99915966_99916692_99916823_99917323_99917514_99919534_99919669_99921533
Isoform_170487_3	chr7	+	2321	14	FSM	ENSMUSG00000030729.18	ENSMUST00000084935.11	8834	14	232	6281	-50	-4823	multi-exon	TRUE	canonical	2	3	junction_8	2.32557176274323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATATTTGGATATG	NA	False	NA	NA	False	AATAGA	-15	NA	99876832	99921793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_99877242_99899498_99899667_99901391_99901499_99902439_99902525_99904740_99904825_99909090_99909285_99910806_99910997_99911272_99911371_99912117_99912296_99915871_99915966_99916692_99916823_99917323_99917514_99919534_99919669_99921533
Isoform_170492_3	chr7	+	2423	14	NIC	ENSMUSG00000047248.21	novel	4167	18	NA	NA	76	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	13.619078160464	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAGAAAGCGGTTTGC	NA	False	NA	NA	False	AATAAA	-7	NA	100021563	100065557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062536_100062656_100065255
Isoform_170494_716	chr7	+	1572	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	21	2395	4	323	multi-exon	TRUE	canonical	3	366	junction_1	56.4938140012529	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100142564	100148832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
Isoform_170499_9	chr7	+	1519	7	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	822	2395	92	323	3prime_fragment	FALSE	canonical	3	391	junction_1	52.4139506450546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100143365	100148832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
Isoform_170507_49	chr7	+	850	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	-28	569	1	21	multi-exon	FALSE	canonical	3	255	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCGCAGTGACATAAGTG	7543	False	NA	17	True	AATAAA	-26	NA	100186278	100189007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100186400_100188278
Isoform_170508_116	chr7	+	833	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	1	557	1	33	multi-exon	FALSE	canonical	3	255	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGTGCCTCTATCTTTC	7572	False	NA	29	True	AATAAA	-38	NA	100186307	100189019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100186400_100188278
Isoform_170509_4	chr7	+	1424	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	-27	-6	2	6	multi-exon	FALSE	canonical	3	255	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTTCTCATTTTTAT	7544	False	NA	NA	False	NA	NA	NA	100186279	100189582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100186400_100188278
Isoform_170510_11	chr7	+	1390	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	0	1	0	-1	multi-exon	FALSE	canonical	3	255	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCTAGTCTGCTTCTCA	7571	False	NA	NA	False	NA	NA	NA	100186306	100189575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100186400_100188278
Isoform_170511_5	chr7	+	906	2	FSM	ENSMUSG00000044881.8	ENSMUST00000120454.3	742	2	-131	-33	1	33	multi-exon	FALSE	canonical	2	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGTGCCTCTATCTTTC	7572	False	NA	29	True	AATAAA	-38	NA	100186307	100189019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100186473_100188278
Isoform_170512_5	chr7	+	848	2	FSM	ENSMUSG00000044881.8	ENSMUST00000120454.3	742	2	-72	-34	60	34	multi-exon	FALSE	canonical	2	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTGCCTCTATCTTTCC	7631	False	NA	30	True	AATAAA	-39	NA	100186366	100189020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100186473_100188278
Isoform_170513_429	chr7	+	3096	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	12	2	12	-2	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGTTCACATTCTTTA	NA	False	NA	9	True	AATAAA	-17	NA	100256908	100290473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_170514_23	chr7	+	3203	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	-96	3	8	-3	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256800	100290472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_170529_817	chr7	+	3055	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	156	3	52	-3	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256948	100290472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_170530_257	chr7	+	3030	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	112	72	8	-72	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGGATTGACTCTTT	NA	False	NA	2	True	AATACA	-12	NA	100256904	100290403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_170531_54	chr7	+	3180	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	31	3	31	-3	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256823	100290472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_170533_29	chr7	+	3217	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	-5	2	-5	-2	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGTTCACATTCTTTA	NA	False	NA	9	True	AATAAA	-17	NA	100256787	100290473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_170558_19	chr7	+	1170	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-78	2985	7	0	multi-exon	FALSE	canonical	3	35	junction_2	3.48173074484398	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCCTCCCCTCGTGCC	NA	False	NA	9	True	NA	NA	NA	100355848	100485404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
Isoform_170561_4	chr7	+	6379	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-111	-2191	-26	-8	multi-exon	TRUE	canonical	3	35	junction_2	3.48173074484398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCAAGTAGTTTGATCA	NA	False	NA	NA	False	NA	NA	NA	100355815	100490580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
Isoform_170562_3	chr7	+	6600	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-62	-2461	23	-13	multi-exon	FALSE	canonical	3	35	junction_2	3.48173074484398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAACAAAAACCAAAAC	NA	False	NA	NA	False	ATTAAA	-27	NA	100355864	100490850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
Isoform_170564_36	chr7	+	4362	20	FSM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	-28	-18	14	-5	multi-exon	FALSE	canonical	0	0	junction_17	7.64481610612047	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCAAGTGTCCTGATA	NA	False	NA	11	True	AATAAA	-13	NA	100757953	100933607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100758247_100759945_100760044_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
Isoform_170566_10	chr7	+	4572	20	FSM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	-234	-22	-192	-1	multi-exon	FALSE	canonical	0	0	junction_17	7.64481610612047	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTGTCCTGATAAAGA	NA	False	NA	15	True	AATAAA	-17	NA	100757747	100933611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100758247_100759945_100760044_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
Isoform_170567_4	chr7	+	4623	20	FSM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	-292	-15	-250	-8	multi-exon	FALSE	canonical	0	0	junction_17	7.64481610612047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTTGCAAGTGTCCTG	NA	False	NA	8	True	AATAAA	-10	NA	100757689	100933604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100758247_100759945_100760044_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
Isoform_170570_12	chr7	+	1256	7	FSM	ENSMUSG00000030688.16	ENSMUST00000032927.14	1400	7	144	0	144	0	multi-exon	TRUE	canonical	3	28	junction_2	26.7581763205193	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTCTTTGTGCCTGCT	NA	False	NA	7	True	AATAAA	-18	NA	100970463	100995515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
Isoform_170573_103	chr7	+	5123	34	FSM	ENSMUSG00000032812.19	ENSMUST00000107010.9	5147	34	23	1	23	-1	multi-exon	FALSE	canonical	3	35	junction_3	24.8085044217444	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	100997296	101061100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
Isoform_170575_5	chr7	+	4547	32	Fusion	ENSMUSG00000030653.18_ENSMUSG00000032812.19	novel	4139	32	NA	NA	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	27.40458805401	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	101032033	101061100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_101032192_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
Isoform_170580_104	chr7	+	2979	21	FSM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	22	692	22	0	multi-exon	FALSE	canonical	3	23	junction_1	25.1838738084513	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	101043596	101061101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
Isoform_170583_3	chr7	+	3320	23	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	51057	-10	-40	0	3prime_fragment	TRUE	canonical	0	0	junction_17	2.67873474511956	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGGTTGTCTGTGGACT	2625	False	NA	14	True	AATAAA	-27	NA	101150783	101162034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
Isoform_170585_1751	chr7	+	2156	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	116	2355	-8	3	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACCTTGCCCTCATGCC	NA	False	NA	-19	True	AATAAA	-27	NA	101312955	101437020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
Isoform_170588_24	chr7	+	4263	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	120	244	-4	-244	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTCAGAATGTATGCCC	NA	False	NA	26	True	AAGAAA	-17	NA	101312959	101439131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
Isoform_1706_23	chr10	-	1405	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	-9	578	-9	22	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTGGAGATCCTGACTT	NA	False	NA	-10	True	AATAAA	-17	NA	14581313	14531076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
Isoform_170603_27	chr7	+	3268	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-21	-2310	-1	-1	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTGGTCCAGACTCCT	7816	False	NA	9	True	NA	NA	NA	101545613	101551055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
Isoform_170604_13	chr7	+	1033	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-92	-4	-4	-1	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTCTATTCCCTGTTTG	7745	False	NA	23	True	AATAAA	-23	NA	101545542	101548749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
Isoform_170606_18	chr7	+	3298	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-51	-2310	-31	-1	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTGGTCCAGACTCCT	7786	False	NA	9	True	NA	NA	NA	101545583	101551055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
Isoform_170609_123	chr7	+	815	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-17	2305	-8	0	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	7809	False	NA	25	True	AATAAA	-25	NA	101545606	101548751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_170611_12	chr7	+	3116	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-15	2	-6	2	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	7811	False	NA	8	True	NA	NA	NA	101545608	101551054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_170613_13	chr7	+	3250	5	NIC	ENSMUSG00000030649.19	novel	937	5	NA	NA	3	-1	intron_retention	FALSE	canonical	3	98	junction_2	210.842802817644	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTGGTCCAGACTCCT	7829	False	NA	9	True	NA	NA	NA	101545626	101551055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106
Isoform_170615_28	chr7	+	809	6	NIC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	189.568562794573	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	7810	False	NA	25	True	AATAAA	-25	NA	101545607	101548751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_170616_8	chr7	+	850	6	NIC	ENSMUSG00000030649.19	novel	836	6	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	189.568562794573	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7763	False	NA	19	True	AATAAA	-19	NA	101545560	101548745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_170619_14	chr7	+	761	5	FSM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	-48	-63	28	0	multi-exon	FALSE	canonical	3	48	junction_1	224.489420686143	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	7777	False	NA	24	True	AATAAA	-24	NA	101545574	101548750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_170620_20	chr7	+	1280	6	NIC	ENSMUSG00000030649.19	novel	818	5	NA	NA	-18	0	intron_retention	FALSE	canonical	3	43	junction_1	203.291318063512	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	8254	False	NA	25	True	AATAAA	-25	NA	101546051	101548751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_170624_1224	chr7	+	1058	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	43	18	-31	-18	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGCTGGTTCAACC	7070	False	NA	10	True	GATAAA	-14	NA	101555153	101561092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
Isoform_170625_676	chr7	+	1125	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-24	18	-24	-18	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGCTGGTTCAACC	7003	False	NA	10	True	GATAAA	-14	NA	101555086	101561092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
Isoform_170626_46	chr7	+	1187	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-86	18	-86	-18	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGCTGGTTCAACC	6941	False	NA	10	True	GATAAA	-14	NA	101555024	101561092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
Isoform_170638_198	chr7	+	7083	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	65.3807226091062	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	2100	False	NA	31	True	AATAAA	-19	NA	101583324	101664165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
Isoform_170644_140	chr7	+	7189	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	16	3	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	69.0609131290792	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	2136	False	NA	31	True	AATAAA	-19	NA	101583360	101664165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
Isoform_17066_298	chr11	-	3323	28	FSM	ENSMUSG00000020929.15	ENSMUST00000107060.8	3339	28	12	4	-6	0	multi-exon	FALSE	non_canonical	0	0	junction_26	289.083827865911	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	8460	False	NA	-9	True	TATAAA	-18	NA	102771799	102729302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435_102768545_102771720
Isoform_17067_3876	chr11	-	3295	28	FSM	ENSMUSG00000020929.15	ENSMUST00000107060.8	3339	28	40	4	-10	0	multi-exon	FALSE	non_canonical	0	0	junction_26	289.083827865911	3876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	8488	False	NA	-9	True	TATAAA	-18	NA	102771771	102729302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435_102768545_102771720
Isoform_170695_3	chr7	+	3141	12	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	3	-5	intron_retention	FALSE	canonical	2	3	junction_1	37.4006673383694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTATGTGTTGCCGAT	NA	False	NA	NA	False	AATAAA	-11	NA	101714967	101732964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_101715012_101715666_101715837_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_170698_88	chr7	+	3231	11	FSM	ENSMUSG00000099481.7_ENSMUSG00000100254.2	ENSMUST00000094130.4	2298	11	-257	-676	-10	-5	multi-exon	FALSE	canonical	3	50	junction_1	17.4482090771517	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTATGTGTTGCCGAT	NA	False	NA	NA	False	AATAAA	-11	NA	101714707	101732964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_170702_7	chr7	+	3063	10	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	-10	0	intron_retention	FALSE	canonical	1	6	junction_7	32.9975681857442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTTGCCGATCTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	101714707	101732969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101729735_101729812_101730689_101730818_101731247
Isoform_170706_6	chr7	+	3315	11	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	-10	0	intron_retention	FALSE	canonical	2	6	junction_7	31.3434203621749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTTGCCGATCTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	101714707	101732969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728105_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_170707_4	chr7	+	2612	7	ISM	ENSMUSG00000099481.7	ENSMUST00000153176.8	2456	8	-26	-23	-17	23	intron_retention	FALSE	canonical	2	17	junction_2	36.044725303742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGACAGAGAAGATA	NA	False	NA	NA	False	AAAAAG	-44	NA	101714700	101729525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939
Isoform_170708_27	chr7	+	3202	11	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	-10	-2	intron_retention	FALSE	canonical	2	17	junction_2	28.6462912084619	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGTGTTGCCGATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	101714707	101732967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_170713_9	chr7	+	3138	10	FSM	ENSMUSG00000099481.7	ENSMUST00000106950.8	3131	10	-9	2	-9	-2	multi-exon	FALSE	canonical	2	5	junction_1	31.0606734006004	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGTGTTGCCGATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	101714708	101732967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101715012_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_170715_3	chr7	+	3094	10	ISM	ENSMUSG00000070425.14	ENSMUST00000123372.8	4847	22	-205	13110	-205	-12572	5prime_fragment	FALSE	canonical	2	6	junction_1	30.7643372177013	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGACAGTATGTGTTGCC	NA	False	NA	NA	False	AATAAA	-8	NA	101714714	101732961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_101715012_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_170717_24	chr7	+	3103	11	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	12	-2	intron_retention	FALSE	canonical	3	7	junction_1	28.9048438847194	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGTGTTGCCGATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	101714976	101732967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_101715150_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_170719_3	chr7	+	3063	11	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	17	-5	intron_retention	FALSE	canonical	2	7	junction_1	35.9249217118145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTATGTGTTGCCGAT	NA	False	NA	NA	False	AATAAA	-11	NA	101714981	101732964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr7_+_101715150_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_17072_524	chr11	-	3290	28	FSM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	30	4	-2	0	multi-exon	TRUE	canonical	3	142	junction_26	264.162864923118	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	8496	False	NA	-9	True	TATAAA	-18	NA	102771763	102729302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
Isoform_170724_6	chr7	+	2021	8	NIC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	70.2444710584806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	NA	False	NA	10	True	AATAAA	-17	NA	101859714	101887768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101859799_101871988_101872009_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_170728_7	chr7	+	1999	7	NIC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	59.4065559419909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGGTAGGTATGTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	101859720	101887772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101859799_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_170731_4	chr7	+	2007	8	NIC	ENSMUSG00000030990.19	novel	427	5	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	70.0253598377628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	21	False	NA	10	True	AATAAA	-17	NA	101871622	101887768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101871693_101871988_101872009_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_170732_6	chr7	+	2119	8	NIC	ENSMUSG00000030990.19	novel	1253	8	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	4	junction_4	69.8333292744304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGAGGTAGGTATGTT	602	False	NA	11	True	AATAAA	-18	NA	101872242	101887769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101872358_101872585_101872698_101875477_101875653_101884868_101884967_101885300_101885554_101885654_101885750_101886328_101886438_101886607
Isoform_170733_4	chr7	+	2115	8	FSM	ENSMUSG00000030990.19	ENSMUST00000119816.9	1253	8	-33	-829	-1	2	multi-exon	FALSE	canonical	3	4	junction_4	67.5063111184156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGAGGTAGGTATGTT	618	False	NA	11	True	AATAAA	-18	NA	101872258	101887769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101884868_101884967_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_170735_80	chr7	+	1985	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	43	6	0	1	multi-exon	FALSE	canonical	3	53	junction_5	43.1689188601655	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	637	False	NA	10	True	AATAAA	-17	NA	101872277	101887768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
Isoform_170737_179	chr7	+	2000	7	FSM	ENSMUSG00000030990.19	ENSMUST00000033292.14	1201	7	2	-801	0	-3	multi-exon	FALSE	canonical	3	107	junction_5	27.0657635317306	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	637	False	NA	13	True	AATAAA	-20	NA	101872277	101887771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_170739_4	chr7	+	2116	6	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	3	-3	intron_retention	FALSE	canonical	3	107	junction_4	29.3434830925028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	622	False	NA	13	True	AATAAA	-20	NA	101872262	101887771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885762_101886328_101886438_101886607
Isoform_170741_10	chr7	+	1910	6	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	63.6948977548438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	600	False	NA	10	True	AATAAA	-17	NA	101872240	101887768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
Isoform_170742_22	chr7	+	1885	6	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	55.9692772867401	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	637	False	NA	10	True	AATAAA	-17	NA	101872277	101887768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_170744_8	chr7	+	2135	7	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	67.2210284558833	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	637	False	NA	13	True	AATAAA	-20	NA	101872277	101887771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101872505_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
Isoform_170745_12	chr7	+	2149	7	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	61.1201003489578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGGTAGGTATGTTGCT	636	False	NA	14	True	AATAAA	-21	NA	101872276	101887772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101872505_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_170749_55	chr7	+	4161	13	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.93856620135735	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101917029	102086525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
Isoform_17075_421	chr11	-	3311	28	NNC	ENSMUSG00000020929.15	novel	3339	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	457.583696722439	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	8469	False	NA	-9	True	TATAAA	-18	NA	102771790	102729302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753603_102755533_102755617_102756395_102756485_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435_102768545_102771720
Isoform_170751_29	chr7	+	4708	13	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	-530	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.93856620135735	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101916482	102086525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
Isoform_170754_9	chr7	+	4081	12	FSM	ENSMUSG00000030987.6	ENSMUST00000033289.6	4085	12	-1	5	-1	-5	multi-exon	FALSE	canonical	2	5	junction_10	17.5852116683732	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCTGGCTGTGACTC	NA	False	NA	18	True	AATAAA	-18	NA	101917011	102086520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
Isoform_170755_4	chr7	+	4597	12	FSM	ENSMUSG00000030987.6	ENSMUST00000033289.6	4085	12	-517	5	-517	-5	multi-exon	TRUE	canonical	2	5	junction_10	17.5852116683732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCTGGCTGTGACTC	NA	False	NA	18	True	AATAAA	-18	NA	101916495	102086520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
Isoform_170759_213	chr7	+	3156	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	-4	845	-4	244	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTACTAAACTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	102090897	102118133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
Isoform_170761_2578	chr7	+	3032	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	120	845	-68	244	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	2578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTACTAAACTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	102091021	102118133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
Isoform_170799_3	chr7	+	2458	2	FSM	ENSMUSG00000058976.5	ENSMUST00000079348.4	1697	2	-57	-704	-57	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAATCTTGTCTGCTTCT	NA	False	NA	NA	False	AATAAA	-11	NA	103065845	103069085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_103065953_103066734
Isoform_1708_13	chr10	-	1887	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	84	3	-11	-3	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATCTGGAAATCCAGT	NA	False	NA	NA	False	AATAAA	-19	NA	14581220	14530501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
Isoform_170804_1060	chr7	+	3556	8	FSM	ENSMUSG00000072244.12	ENSMUST00000098180.10	3827	8	23	248	-19	-248	multi-exon	FALSE	canonical	2	421	junction_3	109.572825470701	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868024	103884111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
Isoform_170806_26	chr7	+	3762	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	15	-4	intron_retention	TRUE	canonical	0	0	junction_8	239.859203492382	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAGGGAGACTTGAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	103868016	103884355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
Isoform_170814_186	chr7	+	3617	8	NIC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-248	intron_retention	FALSE	canonical	2	115	junction_1	215.402423574185	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868617	103884111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
Isoform_170815_23	chr7	+	2777	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-1042	intron_retention	FALSE	canonical	0	0	junction_8	276.31221018985	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATTGTAGCTTTGGTT	NA	False	NA	15	True	AATAAA	-20	NA	103868617	103883317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
Isoform_170830_4	chr7	+	2541	8	FSM	ENSMUSG00000056144.15	ENSMUST00000106849.9	2578	8	42	-5	6	5	multi-exon	TRUE	canonical	1	1	junction_3	5.31843156256751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCTGTTCATTTATAT	NA	False	NA	12	True	ATTAAA	-20	NA	103893705	103911446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_103893800_103896737_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909426_103909684_103909712_103910097
Isoform_170832_12	chr7	+	2500	8	FSM	ENSMUSG00000056144.15	ENSMUST00000060315.12	2590	8	95	-5	61	5	multi-exon	FALSE	canonical	1	1	junction_3	5.3642809587196	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCTGTTCATTTATAT	NA	False	NA	12	True	ATTAAA	-20	NA	103893760	103911446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_103893814_103896737_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909426_103909684_103909712_103910097
Isoform_170834_3	chr7	+	2659	3	FSM	ENSMUSG00000054568.8	ENSMUST00000067695.8	2656	3	-6	3	-6	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTGTCTGCTTCTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	104506209	104511871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_104506316_104508521_104508628_104509424
Isoform_170835_9	chr7	+	2489	6	FSM	ENSMUSG00000030897.6	ENSMUST00000033187.6	2484	6	0	-5	0	5	multi-exon	FALSE	canonical	1	1	junction_2	2.13541565040626	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTTATCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	105053774	105057954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105053961_105054095_105054198_105054376_105054484_105054688_105055335_105056007_105056358_105056856
Isoform_170837_14	chr7	+	2364	5	FSM	ENSMUSG00000030898.16	ENSMUST00000033189.6	2573	5	209	0	123	0	multi-exon	FALSE	canonical	3	14	junction_2	1.6583123951777	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGGCTCAGATTATTCG	NA	False	NA	NA	False	GATAAA	-15	NA	105075146	105085546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105075383_105082789_105083042_105083201_105083452_105083726_105083903_105084096
Isoform_170839_186	chr7	+	2383	6	FSM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	27	2	27	-2	multi-exon	FALSE	canonical	3	35	junction_2	5.53534100123922	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTTCCTATTTCTTCTT	NA	False	NA	9	True	AATAAA	-19	NA	105203593	105207594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105204045_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
Isoform_170840_3	chr7	+	3015	2	FSM	ENSMUSG00000089847.9	ENSMUST00000151193.2	1083	2	-84	-1848	32	1	multi-exon	FALSE	canonical	3	351	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTGTTTCCTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	105289686	105292840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105289830_105289968
Isoform_170843_6	chr7	+	2913	2	FSM	ENSMUSG00000089847.9	ENSMUST00000151193.2	1083	2	18	-1848	-7	1	multi-exon	FALSE	canonical	3	351	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTGTTTCCTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	105289788	105292840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105289830_105289968
Isoform_170844_49	chr7	+	604	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	384	2285	-8	4	multi-exon	FALSE	canonical	3	351	junction_1	22.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCTATGGGTACCAG	NA	False	NA	11	True	AATAAA	-20	NA	105289646	105290559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105289830_105289968_105290065_105290234
Isoform_170845_121	chr7	+	563	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	424	2286	32	3	multi-exon	FALSE	canonical	3	351	junction_1	22.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTCTATGGGTACCA	NA	False	NA	10	True	AATAAA	-19	NA	105289686	105290558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105289830_105289968_105290065_105290234
Isoform_170846_8	chr7	+	961	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	515	1797	0	1	multi-exon	FALSE	canonical	3	351	junction_1	22.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAAGTGCTTTCTTG	NA	False	NA	NA	False	AATAAA	-8	NA	105289777	105291047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105289830_105289968_105290065_105290234
Isoform_170849_10	chr7	+	652	4	FSM	ENSMUSG00000089847.9	ENSMUST00000210350.2	529	4	-132	9	-29	1	multi-exon	FALSE	canonical	3	28	junction_3	163.903087897154	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAAGTGCTTTCTTG	NA	False	NA	NA	False	AATAAA	-8	NA	105289625	105291047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105289830_105289968_105290065_105290234_105290368_105290828
Isoform_170850_39	chr7	+	659	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	32	3	32	1	multi-exon	FALSE	canonical	3	108	junction_3	126.499011853848	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAAGTGCTTTCTTG	NA	False	NA	NA	False	AATAAA	-8	NA	105289686	105291047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
Isoform_170851_41	chr7	+	572	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	119	3	0	1	multi-exon	FALSE	canonical	3	108	junction_3	126.499011853848	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAAGTGCTTTCTTG	NA	False	NA	NA	False	AATAAA	-8	NA	105289773	105291047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
Isoform_170853_457	chr7	+	1731	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	58	6	-21	1	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTCGTGTGGGGAC	NA	False	NA	22	True	AATAAA	-12	NA	105385856	105392126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
Isoform_170854_141	chr7	+	1798	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	-9	6	-9	1	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTCGTGTGGGGAC	NA	False	NA	22	True	AATAAA	-12	NA	105385789	105392126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
Isoform_170857_10	chr7	+	1759	13	FSM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	-13	3	-13	1	multi-exon	FALSE	canonical	0	0	junction_1	93.7171794401764	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTCGTGTGGGGAC	NA	False	NA	22	True	AATAAA	-12	NA	105385918	105392126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_105386014_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
Isoform_170860_8	chr7	+	3278	11	FSM	ENSMUSG00000016626.11	ENSMUST00000084763.5	3272	11	2	-8	2	-1	multi-exon	FALSE	canonical	2	8	junction_7	2.19089023002066	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTGTCATGTTTTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	106766198	106797308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_106766289_106780365_106780453_106780877_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353_106796525_106796983
Isoform_170861_8	chr7	+	3342	11	FSM	ENSMUSG00000016626.11	ENSMUST00000084763.5	3272	11	-61	-9	-61	0	multi-exon	FALSE	canonical	2	8	junction_7	2.19089023002066	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGTCATGTTTTTTAT	NA	False	NA	NA	False	AGTAAA	-20	NA	106766135	106797309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_106766289_106780365_106780453_106780877_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353_106796525_106796983
Isoform_170863_15	chr7	+	981	4	NNC	ENSMUSG00000057215.7	novel	1294	6	NA	NA	-9	-4403	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	8.98146239020499	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATTGTGTGTTTGTCCC	NA	False	NA	11	True	AATAAA	-18	NA	106842219	106895200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_106842336_106883988_106884145_106884819_106884938_106894609
Isoform_170864_207	chr7	+	3822	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-11	6	-11	-3	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAGTCGTTGTCTCA	NA	False	NA	NA	False	AGTAAA	-13	NA	106969985	107147857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
Isoform_170865_177	chr7	+	3883	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-72	6	-10	-3	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAGTCGTTGTCTCA	NA	False	NA	NA	False	AGTAAA	-13	NA	106969924	107147857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
Isoform_170867_6	chr7	+	4039	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-228	6	-166	-3	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAGTCGTTGTCTCA	NA	False	NA	NA	False	AGTAAA	-13	NA	106969768	107147857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
Isoform_170871_9	chr7	+	3871	7	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	53.2679286458768	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAGTCGTTGTCTCA	NA	False	NA	NA	False	AGTAAA	-13	NA	106969931	107147857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105700_107105826_107145726
Isoform_170872_10	chr7	+	3797	7	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	53.2679286458768	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAGTCGTTGTCTCA	NA	False	NA	NA	False	AGTAAA	-13	NA	106970005	107147857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105700_107105826_107145726
Isoform_170874_17	chr7	+	3530	6	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	62.0064512772663	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAGTCGTTGTCTCA	NA	False	NA	NA	False	AGTAAA	-13	NA	106969925	107147857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_106970355_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
Isoform_170882_6	chr7	+	3147	3	FSM	ENSMUSG00000051041.9	ENSMUST00000120990.2	1685	3	-15	-1447	-15	1447	multi-exon	FALSE	canonical	2	7	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCTCATCAGGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	107166637	107191748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_107167102_107170243_107170533_107189354
Isoform_170885_13	chr7	+	3504	24	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-168	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	7.22105721461798	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGTGAAACATTTTTA	7077	False	NA	NA	False	AATAAA	-16	NA	107194245	107344092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
Isoform_170886_29	chr7	+	3344	24	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	7.22105721461798	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGTGAAACATTTTTA	7237	False	NA	NA	False	AATAAA	-16	NA	107194405	107344092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
Isoform_170889_2718	chr7	+	1248	8	FSM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	0	1266	0	677	multi-exon	FALSE	canonical	3	2245	junction_2	107.423632105296	2718	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTTTATCTGATGCG	NA	False	NA	NA	False	AATAAA	-19	NA	108533623	108540892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
Isoform_170909_7	chr7	+	6011	12	FSM	ENSMUSG00000031028.15	ENSMUST00000033341.12	5997	12	-14	0	-14	0	multi-exon	FALSE	canonical	3	8	junction_1	5.29306422836714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGTCCTTGGTTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	108610017	108633667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
Isoform_170914_3446	chr7	+	514	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	49	595	0	6	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	3446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCATCCTTCCTTGT	NA	False	NA	8	True	ATTAAA	-20	NA	109118402	109120979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
Isoform_170915_163	chr7	+	1097	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	49	12	0	-12	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGATTGTCTACATCTT	NA	False	NA	8	True	AATAAA	-12	NA	109118402	109121562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
Isoform_170916_178	chr7	+	559	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	0	599	0	2	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGCATCCTTCC	NA	False	NA	4	True	ATTAAA	-16	NA	109118353	109120975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
Isoform_17092_250	chr11	-	3302	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	32	-8	-4	8	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTAGTGCTGATTTTTC	3756	False	NA	1	True	AATAAA	-40	NA	102815918	102796346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
Isoform_170924_46	chr7	+	735	5	NIC	ENSMUSG00000046364.15	novel	526	4	NA	NA	8	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6920.42061582965	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCATCCTTCCTTGT	NA	False	NA	8	True	ATTAAA	-20	NA	109118434	109120979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_109118683_109118791_109118856_109119124_109119201_109119674_109119850_109120807
Isoform_17093_123	chr11	-	3323	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	3	0	3	0	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGGAAAGTTAGTGCT	3727	False	NA	-7	True	AATAAA	-32	NA	102815947	102796354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
Isoform_170933_41	chr7	+	779	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	24	225	24	-4	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGATGCATCAATCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	109302920	109311171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_170935_51	chr7	+	958	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	63	7	1	-7	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTCATTTTATTGC	NA	False	NA	NA	False	AATAAA	-18	NA	109302959	109311389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_170936_40	chr7	+	1012	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	9	7	9	-7	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTCATTTTATTGC	NA	False	NA	NA	False	AATAAA	-18	NA	109302905	109311389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_170937_9	chr7	+	739	6	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	165.285692060747	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGATGCATCAATCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	109302958	109311171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_109302984_109303152_109303378_109304159_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_170938_5	chr7	+	1014	6	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	4	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	165.285692060747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTCATTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	109302900	109311388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_109302984_109303152_109303378_109304159_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_170939_7	chr7	+	982	6	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	0	18	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	165.285692060747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAAAAAGACAATGT	NA	False	NA	NA	False	AATAAA	-43	NA	109302958	109311414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_109302984_109303152_109303378_109304159_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_170941_17	chr7	+	1116	5	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	12	-7	intron_retention	FALSE	canonical	3	347	junction_1	28.0624304008046	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTCATTTTATTGC	NA	False	NA	NA	False	AATAAA	-18	NA	109302970	109311389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_170946_4	chr7	+	813	5	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	94	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	175.074805440417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGATGCATCAATCTT	NA	False	NA	NA	False	AATAAA	-20	NA	109303052	109311170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_109303378_109304159_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_170953_588	chr7	+	4233	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	41	489	0	5	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGATCTGATTGCAAT	7239	False	NA	26	True	ATTAAA	-21	NA	109617521	109655327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
Isoform_170954_164	chr7	+	4265	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	6	492	6	2	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7204	False	NA	23	True	ATTAAA	-18	NA	109617486	109655324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
Isoform_170956_479	chr7	+	4719	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	41	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTTTGTGTTGTGTTT	7239	False	NA	NA	False	AATGAA	-36	NA	109617521	109655813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
Isoform_170958_92	chr7	+	4765	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	-5	3	-5	-3	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTTTGTGTTGTGTTT	7193	False	NA	NA	False	AATGAA	-36	NA	109617475	109655813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
Isoform_170959_40	chr7	+	4996	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	41	-274	0	274	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTGTGAAGGGGTGCA	7239	False	NA	13	True	AATAAA	-25	NA	109617521	109656090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
Isoform_17096_36	chr11	-	1545	2	FSM	ENSMUSG00000045532.6	ENSMUST00000057849.6	1473	2	-72	0	-72	0	multi-exon	FALSE	canonical	3	27	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATTTCAGTCTGTGCC	8587	False	NA	-10	True	AATAAA	-16	NA	102837586	102830089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102830739_102836690
Isoform_17102_1165	chr11	-	1699	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	45	0	45	0	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	8238	False	NA	-5	True	NA	NA	NA	102907949	102884872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
Isoform_171026_150	chr7	+	3002	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	2	-1	2	1	multi-exon	TRUE	canonical	3	81	junction_4	55.3423285861133	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATACTTTTTGTTTGT	NA	False	NA	13	True	AATACA	-11	NA	109660918	109694595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
Isoform_171029_122	chr7	+	2997	16	FSM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	4	-370	4	1	multi-exon	FALSE	canonical	3	74	junction_4	56.3191698171137	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATACTTTTTGTTTGT	NA	False	NA	13	True	AATACA	-11	NA	109660920	109694595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
Isoform_17103_634	chr11	-	1751	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	8186	False	NA	-5	True	NA	NA	NA	102908001	102884872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
Isoform_171036_1239	chr7	+	3376	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	42	1	42	-1	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTAAATCTTCACGGT	NA	False	NA	25	True	ATTAAA	-22	NA	109721294	109742492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
Isoform_171039_37	chr7	+	3455	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-37	1	-37	-1	multi-exon	TRUE	canonical	3	352	junction_6	26.6084573021436	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTAAATCTTCACGGT	NA	False	NA	25	True	ATTAAA	-22	NA	109721215	109742492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
Isoform_171048_43	chr7	+	3268	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-15	166	-15	-166	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAACAATATTTGGC	NA	False	NA	NA	False	AATACA	-20	NA	109721237	109742327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
Isoform_171058_23	chr7	+	3248	10	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	23	-1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	119.043409449383	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTAAATCTTCACGGT	NA	False	NA	25	True	ATTAAA	-22	NA	109721275	109742492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
Isoform_171067_406	chr7	+	3935	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	22	70	1	-70	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGGTTTCTATTTTT	NA	False	NA	7	True	ATTAAA	-14	NA	109820939	109882643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
Isoform_171068_282	chr7	+	3965	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	-6	68	-6	-68	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109820911	109882645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
Isoform_171069_54	chr7	+	4010	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	22	-5	1	5	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGTTACATTAATAAAA	NA	False	NA	82	True	ATTAAA	-25	NA	109820939	109882718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
Isoform_171088_10	chr7	+	1395	4	FSM	ENSMUSG00000030790.16	ENSMUST00000033054.10	1390	4	-2	-3	-2	3	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCGGTTCATGCATTTG	5111	False	NA	NA	False	AATAAA	-19	NA	110226865	110229030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_110227029_110227463_110227584_110227731_110227882_110228068
Isoform_171089_36	chr7	+	3850	15	FSM	ENSMUSG00000005686.18	ENSMUST00000170374.8	3489	15	119	-480	-18	-6	multi-exon	FALSE	canonical	3	40	junction_1	9.21539306745812	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAACAAATGTTTCTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	110367531	110411606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
Isoform_171090_8	chr7	+	4092	15	FSM	ENSMUSG00000005686.18	ENSMUST00000170374.8	3489	15	-120	-483	-120	-3	multi-exon	FALSE	canonical	3	40	junction_1	9.21539306745812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAATGTTTCTTTATTT	NA	False	NA	NA	False	AATAAA	-25	NA	110367292	110411609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
Isoform_171091_34	chr7	+	3986	15	FSM	ENSMUSG00000005686.18	ENSMUST00000170374.8	3489	15	-17	-480	-17	-6	multi-exon	FALSE	canonical	3	40	junction_1	9.21539306745812	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAACAAATGTTTCTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	110367395	110411606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
Isoform_171093_28	chr7	+	4100	15	FSM	ENSMUSG00000005686.18	ENSMUST00000213373.2	3337	15	-287	-476	281	-10	multi-exon	FALSE	canonical	3	8	junction_1	15.4927567012485	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAATAGAACAAATGTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	110367830	110411602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_110368140_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
Isoform_171097_5	chr7	+	1120	2	FSM	ENSMUSG00000005609.17	ENSMUST00000146709.2	765	2	-18	-337	0	337	multi-exon	FALSE	canonical	3	174	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAAAG	543	False	NA	NA	False	NA	NA	NA	110628201	110630353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_110628389_110629420
Isoform_17110_116	chr11	-	2982	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	25	16	-15	-16	multi-exon	FALSE	canonical	2	10	junction_14	6.65168384389875	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGTAAAGAAAA	9434	False	NA	NA	False	NA	NA	NA	102992459	102961145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
Isoform_171104_10	chr7	+	4536	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	-236	0	-236	0	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	263	False	NA	31	True	AATAAA	-17	NA	110627921	110655584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
Isoform_171105_285	chr7	+	4255	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	45	0	1	0	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	544	False	NA	31	True	AATAAA	-17	NA	110628202	110655584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
Isoform_171106_84	chr7	+	4295	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	5	0	5	0	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	504	False	NA	31	True	AATAAA	-17	NA	110628162	110655584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
Isoform_17111_4	chr11	-	3786	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	0	-763	0	763	multi-exon	FALSE	canonical	2	10	junction_14	6.65168384389875	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAAAAAGATTGG	9409	False	NA	NA	False	NA	NA	NA	102992484	102960366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
Isoform_171111_170	chr7	+	4717	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-20	0	-18	0	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAATGAATCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	111622692	111709690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
Isoform_171112_167	chr7	+	5621	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-23	-901	-21	0	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622689	111710591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
Isoform_171117_265	chr7	+	5561	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-21	0	-21	0	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622689	111710591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
Isoform_17112_8	chr11	-	2827	15	NNC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	3824	-16	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	7.81449464332866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGTAAAGAAAA	9016	False	NA	NA	False	NA	NA	NA	102988593	102961145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102988494
Isoform_171126_21	chr7	+	4214	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	236	4	37	-4	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTCTTCGCTGTTTCTT	3565	False	NA	NA	False	AATGAA	-9	NA	112027148	112190895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
Isoform_171128_10	chr7	+	2300	12	FSM	ENSMUSG00000055320.19	ENSMUST00000084705.13	2543	12	-2	245	-2	-245	multi-exon	TRUE	canonical	2	15	junction_1	4.44804720826366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTCTTTCTTTTTAA	NA	False	NA	NA	False	ACTAAA	-15	NA	112278522	112498421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
Isoform_171129_74	chr7	+	2859	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	48	1	-13	-1	multi-exon	FALSE	canonical	3	63	junction_10	14.0300429530047	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTTCCCAATTGATA	3795	False	NA	NA	False	AATAAA	-19	NA	112806719	112913332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
Isoform_17113_3	chr11	-	3149	14	NIC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	5	-16	intron_retention	FALSE	canonical	2	10	junction_13	6.71393499200901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGTAAAGAAAA	9414	False	NA	NA	False	NA	NA	NA	102992479	102961145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
Isoform_171130_10	chr7	+	2908	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	-1	1	-1	-1	multi-exon	FALSE	canonical	3	63	junction_10	14.0300429530047	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTTCCCAATTGATA	3746	False	NA	NA	False	AATAAA	-19	NA	112806670	112913332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
Isoform_171131_27	chr7	+	2839	20	NNC	ENSMUSG00000055116.9	novel	2908	20	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	18.7486656958292	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTTCCCAATTGATA	3812	False	NA	NA	False	AATAAA	-19	NA	112806736	112913332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898396_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
Isoform_171132_5	chr7	+	2745	19	NIC	ENSMUSG00000055116.9	novel	2908	20	NA	NA	-27	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	21.9418423211098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTTCCCAATTGATA	3781	False	NA	NA	False	AATAAA	-19	NA	112806705	112913332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_112806852_112833830_112833904_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
Isoform_171133_3	chr7	+	2597	18	NIC	ENSMUSG00000055116.9	novel	2908	20	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	22.9333319921676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACTGTTCCCAATTGA	3801	False	NA	NA	False	AATAAA	-17	NA	112806725	112913330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_112806852_112833830_112833904_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
Isoform_17114_11	chr11	-	340	2	ISM	ENSMUSG00000020940.14	ENSMUST00000021323.11	1199	10	9065	1	9039	-1	3prime_fragment	FALSE	canonical	3	22	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTGCGCCTAGTGGG	NA	False	NA	NA	False	AGTAAA	-16	NA	103090309	103089770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_103089945_103090143
Isoform_171144_69	chr7	+	4348	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	-14	628	-14	425	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATCTATTGTATTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	113113026	113170090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_171145_433	chr7	+	4296	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	35	631	7	422	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGCATCTATTGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	113113075	113170087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_17115_10	chr11	-	2721	8	ISM	ENSMUSG00000020941.8	ENSMUST00000021324.3	4246	16	36847	2	-8778	-2	3prime_fragment	FALSE	canonical	1	3	junction_4	2.18529407725405	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTGTTTGTAGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	103121451	103110589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157
Isoform_171151_72	chr7	+	4925	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	35	2	7	-2	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATGTACTCCTTTGC	NA	False	NA	12	True	AATAAA	-20	NA	113113075	113170716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_171153_14	chr7	+	4960	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	0	2	0	-2	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATGTACTCCTTTGC	NA	False	NA	12	True	AATAAA	-20	NA	113113040	113170716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_171159_48	chr7	+	4297	13	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	7	427	combination_of_known_junctions	FALSE	canonical	2	61	junction_2	108.378452142891	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	113113075	113170092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_113113145_113125194_113125246_113138483_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_171163_10	chr7	+	4928	13	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	61	junction_2	108.378452142891	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATGTACTCCTTTGC	NA	False	NA	12	True	AATAAA	-20	NA	113113068	113170716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_113113145_113125194_113125246_113138483_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_171168_29	chr7	+	5363	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-100	1310	-100	-1310	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGCGTTTATATAATCCA	NA	False	NA	13	True	AATAAA	-23	NA	114014415	114137176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
Isoform_171169_78	chr7	+	5302	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-43	1314	-43	-1314	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTTGCGTTTATATAA	NA	False	NA	9	True	AATAAA	-19	NA	114014472	114137172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
Isoform_17117_5	chr11	-	2134	5	ISM	ENSMUSG00000034255.19	ENSMUST00000041385.14	3512	16	10591	-2	-1	0	intron_retention	FALSE	canonical	3	10	junction_3	4.49305018890286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGCGAATGTACTCTG	NA	False	NA	-1	True	NA	NA	NA	103224937	103222323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665
Isoform_171177_1079	chr7	+	1427	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	52	0	12	0	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692587	115704445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
Isoform_171178_468	chr7	+	1464	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	15	0	15	0	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692550	115704445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
Isoform_17118_16	chr11	-	2070	6	ISM	ENSMUSG00000034255.19	ENSMUST00000041385.14	3512	16	10583	-2	-9	0	3prime_fragment	FALSE	canonical	3	10	junction_3	4.44522215417857	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGCGAATGTACTCTG	NA	False	NA	-1	True	NA	NA	NA	103224945	103222323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836
Isoform_171195_32	chr7	+	1662	14	FSM	ENSMUSG00000030659.15	ENSMUST00000032895.15	1685	14	24	-1	9	1	multi-exon	FALSE	canonical	3	41	junction_2	11.132340009308	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACACGTTTTTATCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	116103627	116139820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
Isoform_171196_12	chr7	+	1500	13	NIC	ENSMUSG00000030659.15	novel	1685	14	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	13.8283123417944	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACACGTTTTTATCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	116103618	116139820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_116103720_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
Isoform_171201_71	chr7	+	5061	16	FSM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	5	7	5	1	multi-exon	FALSE	canonical	3	57	junction_14	14.3789970288458	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATCTTGTTGGATCT	NA	False	NA	3	True	AATAAA	-13	NA	118311779	118336240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332196_118334490
Isoform_171202_75	chr7	+	4980	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_14	17.3487634094403	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGTTGGATCTCTTT	NA	False	NA	7	True	AATAAA	-17	NA	118311778	118336244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
Isoform_171203_5	chr7	+	5506	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	0	0	intron_retention	TRUE	canonical	3	69	junction_11	11.8960206002868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311774	118336247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118332196_118334490
Isoform_171204_4	chr7	+	4870	14	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	50	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	26.7477809730499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATCTTGTTGGATCT	NA	False	NA	3	True	AATAAA	-13	NA	118311824	118336240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118334490
Isoform_171209_1650	chr7	+	3101	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	517	1479	-4	0	multi-exon	FALSE	canonical	3	302	junction_1	75.0223744403406	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCAGTGTCTCGGTGTG	NA	False	NA	8	True	ATTAAA	-19	NA	118339965	118440710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
Isoform_17121_10	chr11	-	4218	18	FSM	ENSMUSG00000034255.19	ENSMUST00000107024.9	4261	18	43	0	43	0	multi-exon	TRUE	canonical	2	3	junction_6	4.84999910819383	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCGAATGTACTCTGG	8217	False	NA	0	True	NA	NA	NA	103254190	103222322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103251072_103251745_103253032_103253161_103254094
Isoform_171211_18	chr7	+	3137	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	483	1477	-23	0	multi-exon	TRUE	canonical	3	302	junction_1	75.0223744403406	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTCGGTGTGTG	NA	False	NA	10	True	ATTAAA	-21	NA	118339931	118440712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
Isoform_17122_7	chr11	-	4351	18	FSM	ENSMUSG00000034255.19	ENSMUST00000107024.9	4261	18	-92	2	-35	-1	multi-exon	FALSE	canonical	2	3	junction_6	4.84999910819383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGGCGAATGTACTCT	8082	False	NA	-2	True	NA	NA	NA	103254325	103222324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103251072_103251745_103253032_103253161_103254094
Isoform_171227_262	chr7	+	1449	2	FSM	ENSMUSG00000100153.3	ENSMUST00000207161.2	1437	2	-15	3	-15	-3	multi-exon	FALSE	canonical	3	469	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119339133	119341446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_119340294_119341157
Isoform_171228_6	chr7	+	2370	11	ISM	ENSMUSG00000030924.17	ENSMUST00000106520.9	2492	20	67	20720	-42	213	intron_retention	FALSE	canonical	3	15	junction_1	8.75728268357257	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTAGTATGTATTCAC	NA	False	NA	NA	False	AATAAA	-21	NA	119393299	119427446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_119393726_119398787_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525
Isoform_171229_4	chr7	+	2433	11	NIC	ENSMUSG00000030924.17	novel	2492	20	NA	NA	1	206	intron_retention	FALSE	canonical	3	15	junction_1	8.75728268357257	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACCTTTGTAGTATG	NA	False	NA	NA	False	AATAAA	-14	NA	119393229	119427439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_119393726_119398787_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525
Isoform_171230_8	chr7	+	1087	5	FSM	ENSMUSG00000030922.13	ENSMUST00000054440.11	752	5	-14	-321	1	1	multi-exon	FALSE	canonical	3	10	junction_1	26.343879744639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGTTTTGTTGATT	NA	False	NA	10	True	TATAAA	-21	NA	119495090	119515977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_119495114_119499333_119499532_119509026_119509186_119513395_119513489_119515363
Isoform_171231_9	chr7	+	1023	4	FSM	ENSMUSG00000030922.13	ENSMUST00000208202.2	936	4	-3	-84	0	1	multi-exon	FALSE	canonical	3	11	junction_1	24.5356882927706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGTTTTGTTGATT	NA	False	NA	10	True	TATAAA	-21	NA	119495089	119515977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_119495114_119508893_119509186_119513395_119513489_119515363
Isoform_171232_9	chr7	+	890	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	6	-21	0	1	multi-exon	FALSE	canonical	3	29	junction_1	16.3095064303001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGTTTTGTTGATT	NA	False	NA	10	True	TATAAA	-21	NA	119495089	119515977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_119495114_119509026_119509186_119513395_119513489_119515363
Isoform_171235_22	chr7	+	1464	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	23	-3	-19	3	multi-exon	FALSE	canonical	3	63	junction_3	8.8423695919137	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCTTTTTCTTCTA	NA	False	NA	8	True	ATTAAA	-17	NA	119701598	119720212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
Isoform_171236_73	chr7	+	1390	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	23	71	-19	-71	multi-exon	FALSE	canonical	3	63	junction_3	8.8423695919137	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAACCAGAGCCTGTGC	NA	False	NA	-66	True	AATAAA	-29	NA	119701598	119720138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
Isoform_171238_157	chr7	+	1790	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	60	46	-4	-46	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCCTGGATTTTGCCC	NA	False	NA	6	True	AATAAA	-17	NA	120234458	120258701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
Isoform_171240_88	chr7	+	1842	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	60	-6	-4	6	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCAGCTGGTTCCTTC	NA	False	NA	28	True	AGTAAA	-20	NA	120234458	120258753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
Isoform_171250_6	chr7	+	747	3	ISM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-73	3815	-11	-2	5prime_fragment	FALSE	canonical	3	73	junction_1	59	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTGAAGGCAGTCATTT	NA	False	NA	19	True	AATAAA	-25	NA	120276829	120325902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_120276936_120277012_120277094_120325342
Isoform_171254_13	chr7	+	822	2	FSM	ENSMUSG00000046096.8	ENSMUST00000208454.2	813	2	-23	14	-21	-5	multi-exon	FALSE	canonical	3	191	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATATAACTTAGGTGA	NA	False	NA	7	True	AATAAA	-13	NA	120276819	120325890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120277094_120325342
Isoform_171256_41	chr7	+	4256	3	FSM	ENSMUSG00000046096.8	ENSMUST00000060175.8	4831	3	-8	583	3	0	multi-exon	FALSE	canonical	3	80	junction_2	55.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	AATAAA	-24	NA	120276845	120333494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120277094_120325342_120325556_120329699
Isoform_171258_16	chr7	+	2394	3	NIC	ENSMUSG00000046096.8	novel	4831	3	NA	NA	-21	0	intron_retention	FALSE	canonical	3	16	junction_2	87.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	AATAAA	-24	NA	120276819	120333494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_120277094_120325342_120325556_120331587
Isoform_171259_240	chr7	+	3099	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	26	3455	26	-6	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGTTTGGCCTTTAT	NA	False	NA	3	True	AATATA	-10	NA	120442079	120503218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
Isoform_17126_101	chr11	-	5142	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	11	815	11	-815	multi-exon	FALSE	canonical	3	46	junction_6	16.0020659823186	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTTTCTGAATCTCA	NA	False	NA	-1	True	AGTAAA	-19	NA	103303502	103255915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
Isoform_171264_5	chr7	+	4414	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	13	2153	13	1296	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAATCTCTCAGAGTAAC	NA	False	NA	NA	False	NA	NA	NA	120442066	120504520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
Isoform_171266_7	chr7	+	3117	19	NIC	ENSMUSG00000035064.18	novel	3047	18	NA	NA	18	-6	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	28.2703002556253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGTTTGGCCTTTAT	NA	False	NA	3	True	AATATA	-10	NA	120442840	120503218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_120443009_120443918_120444013_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
Isoform_171267_8	chr7	+	3080	18	FSM	ENSMUSG00000035064.18	ENSMUST00000106489.9	3047	18	-33	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	20.5168510369059	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGCCTTTATACATGC	NA	False	NA	9	True	AATATA	-16	NA	120442789	120503224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120443009_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
Isoform_171274_291	chr7	+	2598	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	3	1593	3	18	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGGTTTAATATTTT	NA	False	NA	31	True	AATAAA	-33	NA	120517009	120545062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
Isoform_171275_261	chr7	+	3011	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	3	1180	3	3	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCATAGTGCTGCTGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	120517009	120545475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
Isoform_171276_79	chr7	+	2641	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	-40	1593	0	18	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGGTTTAATATTTT	NA	False	NA	31	True	AATAAA	-33	NA	120516966	120545062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
Isoform_171277_65	chr7	+	3055	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	-39	1178	1	5	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATAGTGCTGCTGTCCTC	NA	False	NA	NA	False	AATAAA	-19	NA	120516967	120545477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
Isoform_17128_36	chr11	-	5170	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-16	814	-16	-814	multi-exon	FALSE	canonical	3	46	junction_6	16.0020659823186	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCTGAATCTCAA	NA	False	NA	0	True	AGTAAA	-20	NA	103303529	103255914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
Isoform_171287_149	chr7	+	1697	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	126	0	126	0	multi-exon	FALSE	canonical	3	223	junction_4	46.4435140789325	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9553	False	NA	7	True	AATAAA	-16	NA	120633793	120676058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
Isoform_17129_4	chr11	-	5956	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	11	1	11	-1	multi-exon	TRUE	canonical	3	46	junction_6	16.0020659823186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTTGTGTTTAGTGTCTA	NA	False	NA	-3	True	AATAAA	-16	NA	103303502	103255101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
Isoform_171292_52	chr7	+	1694	5	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	126	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	108.278287297131	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9553	False	NA	7	True	AATAAA	-16	NA	120633793	120676058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675355
Isoform_171299_17	chr7	+	2299	6	ISM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	248	4561	-17	1	5prime_fragment	FALSE	canonical	3	624	junction_1	34.3685903115039	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTTGTCCCCATTGTT	NA	False	NA	NA	False	NA	NA	NA	121666645	121676856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330
Isoform_17130_3	chr11	-	4998	11	NIC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	-3	-815	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24.6497464490002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTTTCTGAATCTCA	NA	False	NA	-1	True	AGTAAA	-19	NA	103303516	103255915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_103257820_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
Isoform_171303_250	chr7	+	4838	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	10	1	10	-1	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTCTCTTTCCTTC	NA	False	NA	8	True	ATTAAA	-13	NA	121666407	121681416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
Isoform_171304_727	chr7	+	4577	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	270	2	-2	-2	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTCTCTCTTTCCTT	NA	False	NA	7	True	ATTAAA	-12	NA	121666667	121681415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
Isoform_17131_31	chr11	-	3124	8	NNC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	-3	-9518	at_least_one_novel_splicesite	FALSE	non_canonical	2	9	junction_1	25.5614505672515	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGTATTGGACAACAT	NA	False	NA	NA	False	NA	NA	NA	103303516	103266960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_103267202_103267225_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
Isoform_171327_5	chr7	+	672	5	NNC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	2	3505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	149.087851617763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCTAGCGTGTATTGT	NA	False	NA	NA	False	AATAAA	-10	NA	121732265	121737862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737659_121737705
Isoform_171328_165	chr7	+	1511	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	21	0	8	0	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	False	NA	14	True	AATAAA	-15	NA	121732284	121748267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
Isoform_171335_10	chr7	+	1401	5	NIC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	8	-7	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	141.324758977329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTGGTTTAGGCTC	NA	False	NA	7	True	AATAAA	-8	NA	121732284	121748260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121747279
Isoform_17134_274	chr11	-	3056	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	205	5	1	-5	multi-exon	TRUE	canonical	3	264	junction_1	54.6867442804927	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCACTTGGCATTCTT	NA	False	NA	-3	True	AATAAA	-26	NA	103588519	103567679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
Isoform_171342_2640	chr7	+	2138	11	NNC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	-32	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	366.335761290104	2640	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCTCTTTTTGGTCT	NA	False	NA	60	True	ATTAAA	-18	NA	121758697	121769100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609_121768875_121768903
Isoform_171343_390	chr7	+	2160	11	NNC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	14	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	366.335761290104	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCTCTTTTTGGTCT	NA	False	NA	60	True	ATTAAA	-18	NA	121758675	121769100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609_121768875_121768903
Isoform_171355_5	chr7	+	3102	17	FSM	ENSMUSG00000052889.12	ENSMUST00000064989.12	2911	17	-192	1	-192	-1	multi-exon	TRUE	canonical	0	0	junction_4	2.23257138743647	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121888327	122227877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_121888741_121889735_121889768_122024181_122024265_122056437_122056550_122057266_122057396_122116051_122116209_122117267_122117403_122127698_122127796_122143855_122144003_122167356_122167531_122181652_122181745_122183620_122183684_122189267_122189407_122193825_122193907_122194188_122194297_122199912_122200054_122226878
Isoform_171356_8	chr7	+	2900	3	FSM	ENSMUSG00000030779.17	ENSMUST00000098062.9	6345	3	-763	4208	-627	1423	multi-exon	FALSE	canonical	3	123	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTGTTCCCTGGCA	6939	False	NA	NA	False	AATAAA	-16	NA	122569159	122579407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_122570351_122575158_122575259_122577798
Isoform_171357_12	chr7	+	1733	3	FSM	ENSMUSG00000030779.17	ENSMUST00000098062.9	6345	3	-764	5376	-628	255	multi-exon	FALSE	canonical	3	123	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGCCATTTCCACG	6938	False	NA	NA	False	AATAAA	-16	NA	122569158	122578239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_122570351_122575158_122575259_122577798
Isoform_171359_86	chr7	+	6809	18	FSM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	-627	2	-627	1	multi-exon	TRUE	canonical	3	62	junction_15	18.9192419579373	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGTTGCAAATGTATAT	6939	False	NA	13	True	AATAAA	-19	NA	122569159	122601778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599806
Isoform_171365_68	chr7	+	6708	17	FSM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	-981	1	-627	-1	multi-exon	FALSE	canonical	3	56	junction_15	18.1597726789186	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTTGCAAATGTATATT	6939	False	NA	14	True	AATAAA	-20	NA	122569159	122601779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
Isoform_171376_5	chr7	+	2577	3	FSM	ENSMUSG00000109814.2	ENSMUST00000211504.2	662	3	-45	-1870	-45	4	multi-exon	FALSE	canonical	2	5	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTTATGGTTTTTTA	1691	False	NA	NA	False	NA	NA	NA	122630592	122667532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_122630774_122660895_122661022_122665262
Isoform_171381_15	chr7	+	7447	24	FSM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	7	729	7	580	multi-exon	FALSE	canonical	3	73	junction_8	29.037424518788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTGTCTCTTTTTTGTG	NA	False	NA	13	True	AATAAA	-25	NA	122723410	122793790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
Isoform_171384_21	chr7	+	4311	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	7	27	combination_of_known_splicesites	TRUE	canonical	3	38	junction_5	32.7131282565666	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122723410	122793237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
Isoform_171389_4	chr7	+	2731	18	NIC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	-224	-5	combination_of_known_junctions	TRUE	canonical	3	9	junction_3	7.39025824684207	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGCTTCAGAGGTGCTG	NA	False	NA	10	True	AATAAA	-17	NA	122813778	122872471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_122814221_122828131_122828215_122832210_122832328_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
Isoform_171390_307	chr7	+	1306	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	56	7	-18	2	multi-exon	FALSE	canonical	0	0	junction_5	88.7783757454483	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTACATCTGTACAAT	6880	False	NA	24	True	AATAAA	-24	NA	122977260	123029574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
Isoform_171391_99	chr7	+	1339	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	29	1	29	-1	multi-exon	FALSE	canonical	0	0	junction_5	88.7783757454483	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTGTACAATGACATT	6853	False	NA	30	True	AATAAA	-30	NA	122977233	123029580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
Isoform_171392_5	chr7	+	1190	10	NIC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	114.483811999237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGACTCTGCTACATCT	6891	False	NA	17	True	AATAAA	-17	NA	122977271	123029567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123029355
Isoform_171393_6	chr7	+	420	2	NNC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	-18	-5231	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	6880	False	NA	NA	False	NA	NA	NA	122977260	122995469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_122977479_122995267
Isoform_171396_16	chr7	+	1580	6	FSM	ENSMUSG00000030762.12	ENSMUST00000033023.10	1487	6	-98	5	-98	1	multi-exon	FALSE	canonical	3	25	junction_2	2.57681974534503	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGTGTCTGTTGACTT	4278	False	NA	2	True	AATAAA	-16	NA	123061415	123067222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_123061682_123061796_123062042_123063411_123063539_123064331_123064547_123065808_123065944_123066630
Isoform_171397_24	chr7	+	1482	6	FSM	ENSMUSG00000030762.12	ENSMUST00000033023.10	1487	6	0	5	0	1	multi-exon	FALSE	canonical	3	25	junction_2	2.57681974534503	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGTGTCTGTTGACTT	4376	False	NA	2	True	AATAAA	-16	NA	123061513	123067222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_123061682_123061796_123062042_123063411_123063539_123064331_123064547_123065808_123065944_123066630
Isoform_171398_118	chr7	+	2384	8	FSM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	-4	9	-4	-9	multi-exon	FALSE	canonical	3	41	junction_7	4.74664220738176	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAAAAGAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	125043843	125061432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_125043965_125051399_125051901_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
Isoform_171400_17	chr7	+	3588	11	FSM	ENSMUSG00000030748.10	ENSMUST00000033004.8	5256	11	160	1508	4	-1	multi-exon	TRUE	canonical	0	0	junction_6	3.9	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTCCTTTACTATACA	NA	False	NA	NA	False	AATAAA	-14	NA	125151451	125177138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_125151501_125163723_125163900_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
Isoform_171401_15	chr7	+	3626	11	NIC	ENSMUSG00000030748.10	novel	5256	11	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	3.9	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTTCCTTTACTATAC	NA	False	NA	NA	False	AATAAA	-13	NA	125151421	125177137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_125151501_125163723_125163909_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
Isoform_171402_13	chr7	+	6142	28	FSM	ENSMUSG00000032743.16	ENSMUST00000069660.13	6148	28	5	1	3	-1	multi-exon	FALSE	canonical	3	6	junction_1	4.90904934097212	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTGTGGTACACTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	125307091	125473964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_125307121_125327480_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
Isoform_171403_3	chr7	+	4130	19	NIC	ENSMUSG00000032743.16	novel	5874	27	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	5.63279638028292	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTCGAGCTTCAGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	125307091	125461168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_125307121_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125460786
Isoform_171404_3	chr7	+	6089	27	FSM	ENSMUSG00000032743.16	ENSMUST00000124223.8	5874	27	32	-247	3	2	multi-exon	FALSE	canonical	2	4	junction_1	5.03772748616398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGTACACTGGATGT	NA	False	NA	NA	False	AATAAA	-18	NA	125307091	125473967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_125307121_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
Isoform_171405_4	chr7	+	1863	4	ISM	ENSMUSG00000032743.16	ENSMUST00000205462.2	4185	15	42319	1	6715	-1	3prime_fragment	FALSE	canonical	3	17	junction_1	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTGTGGTACACTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	125471157	125473964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_125471425_125471858_125472020_125472103_125472193_125472618
Isoform_171407_591	chr7	+	4156	4	FSM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	-54	7	-54	-7	multi-exon	FALSE	canonical	3	196	junction_2	13.4412301024373	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATTGTTTGAGCTGC	NA	False	NA	12	True	AATAAA	-9	NA	125871736	125894181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_125872272_125889028_125889262_125890214_125890418_125890996
Isoform_171410_55	chr7	+	4239	4	FSM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	-137	7	-137	-7	multi-exon	FALSE	canonical	3	196	junction_2	13.4412301024373	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATTGTTTGAGCTGC	NA	False	NA	12	True	AATAAA	-9	NA	125871653	125894181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_125872272_125889028_125889262_125890214_125890418_125890996
Isoform_171416_571	chr7	+	2199	13	FSM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	35	0	2	0	multi-exon	FALSE	canonical	3	161	junction_4	15.3541525327841	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTGCCTTGTGCCTGC	NA	False	NA	12	True	AATAAA	-15	NA	126028272	126045073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
Isoform_171417_7	chr7	+	2557	13	FSM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	-319	-4	-12	4	multi-exon	FALSE	canonical	3	161	junction_4	15.3541525327841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGTGCCTGCAAGC	NA	False	NA	16	True	AATAAA	-19	NA	126027918	126045077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
Isoform_171418_18	chr7	+	2473	12	FSM	ENSMUSG00000030727.13	ENSMUST00000151304.8	2782	12	308	1	1	-1	multi-exon	FALSE	canonical	3	161	junction_4	15.3730471446749	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGTTGCCTTGTGCCTG	NA	False	NA	11	True	AATAAA	-14	NA	126028238	126045072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126044109_126044468
Isoform_171420_7	chr7	+	2574	11	NIC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	1	7	intron_retention	FALSE	canonical	3	161	junction_4	16.1186227699515	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGCCTGCAAGCCCC	NA	False	NA	19	True	AATAAA	-22	NA	126028238	126045080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126044109_126044468
Isoform_171421_42	chr7	+	2198	12	NIC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	55.1880331980083	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCAGTTGCCTTGTGCCT	NA	False	NA	10	True	AATAAA	-13	NA	126028259	126045071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043694_126043751_126043991_126044109_126044468
Isoform_171424_12	chr7	+	2305	12	FSM	ENSMUSG00000030727.13	ENSMUST00000106405.2	2279	12	-25	-1	-13	1	multi-exon	FALSE	canonical	3	161	junction_3	14.2272001159925	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCCTTGTGCCTGCA	NA	False	NA	13	True	AATAAA	-16	NA	126028586	126045074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
Isoform_171426_1077	chr7	+	1686	10	FSM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	-8	1	-8	-1	multi-exon	FALSE	canonical	3	611	junction_6	33.4490583749803	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCTTGTCTTGTGTCT	NA	False	NA	-1	True	AATAAA	-16	NA	126086524	126089898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
Isoform_171427_53	chr7	+	1733	10	FSM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	-55	1	-55	-1	multi-exon	FALSE	canonical	3	611	junction_6	33.4490583749803	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCTTGTCTTGTGTCT	NA	False	NA	-1	True	AATAAA	-16	NA	126086477	126089898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
Isoform_17143_19	chr11	-	3007	5	FSM	ENSMUSG00000020946.14	ENSMUST00000145265.2	917	5	-11	-2079	-11	-5	multi-exon	FALSE	canonical	3	13	junction_4	142.958910180513	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCACTTGGCATTCTT	NA	False	NA	-3	True	AATAAA	-26	NA	103588535	103567679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103588455
Isoform_171436_11	chr7	+	1244	11	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	179.607043291737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	119	False	NA	33	True	AATAAA	-16	NA	126248488	126271951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_126248650_126260223_126260321_126261737_126261824_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
Isoform_171438_37	chr7	+	1410	9	ISM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	7	146	4	0	intron_retention	FALSE	canonical	3	419	junction_3	30.3840007240653	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	118	False	NA	33	True	AATAAA	-16	NA	126248487	126271951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327
Isoform_171439_562	chr7	+	1158	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	8	146	5	0	multi-exon	FALSE	canonical	3	419	junction_3	31.8433666561813	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	119	False	NA	33	True	AATAAA	-16	NA	126248488	126271951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
Isoform_171441_7	chr7	+	1248	11	NNC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	179.407357708651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	118	False	NA	33	True	AATAAA	-16	NA	126248487	126271951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_126248650_126260223_126260321_126261734_126261824_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
Isoform_171443_16	chr7	+	643	2	FSM	ENSMUSG00000047721.9	ENSMUST00000106369.2	642	2	-5	4	2	0	multi-exon	FALSE	canonical	3	2580	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1143	False	NA	18	True	ATTAAA	-13	NA	126295139	126295865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126295272_126295354
Isoform_171445_859	chr7	+	369	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	532	365	2	0	multi-exon	FALSE	canonical	3	2284	junction_2	148	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1143	False	NA	18	True	ATTAAA	-13	NA	126295139	126295865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126295272_126295354_126295453_126295726
Isoform_171446_71	chr7	+	403	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	498	365	-32	0	multi-exon	FALSE	canonical	3	2284	junction_2	148	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1109	False	NA	18	True	ATTAAA	-13	NA	126295105	126295865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126295272_126295354_126295453_126295726
Isoform_17145_78	chr11	-	2931	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-15	-1872	-11	-5	multi-exon	FALSE	canonical	3	79	junction_1	134.545531326759	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCACTTGGCATTCTT	NA	False	NA	-3	True	AATAAA	-26	NA	103588535	103567679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
Isoform_171452_260	chr7	+	1774	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	23	3	23	-3	multi-exon	FALSE	canonical	3	189	junction_5	18.155147341732	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGCCTCTGTCTGTG	5239	False	NA	28	True	TATAAA	-21	NA	126358795	126364988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
Isoform_171454_10	chr7	+	1881	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	-84	3	-84	-3	multi-exon	FALSE	canonical	3	189	junction_5	18.155147341732	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGCCTCTGTCTGTG	5132	False	NA	28	True	TATAAA	-21	NA	126358688	126364988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
Isoform_171456_7	chr7	+	1123	10	FSM	ENSMUSG00000030703.9	ENSMUST00000032944.9	1148	10	24	1	24	-1	multi-exon	TRUE	canonical	1	3	junction_3	2.43938871112224	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGTTCATGGAACAAGG	NA	False	NA	11	True	AATAAA	-17	NA	126365529	126374816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126365782_126366073_126366117_126366346_126366483_126366562_126366609_126366738_126366858_126366934_126367025_126367741_126367876_126370159_126370220_126370333_126370386_126374625
Isoform_171458_138	chr7	+	961	5	FSM	ENSMUSG00000042675.16	ENSMUST00000038614.12	973	5	12	0	-8	0	multi-exon	FALSE	canonical	3	187	junction_2	12.73528562695	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCTCACATGGAAT	8233	False	NA	17	True	AATAAA	-18	NA	126376138	126379686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198
Isoform_171460_13	chr7	+	917	4	NIC	ENSMUSG00000042675.16	novel	973	5	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	89.6449787897918	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCCCTGGCTCACATG	8229	False	NA	13	True	AATAAA	-14	NA	126376134	126379682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_126376276_126376942_126377126_126377477_126377587_126379198
Isoform_171461_8	chr7	+	1629	4	FSM	ENSMUSG00000042675.16	ENSMUST00000106357.8	1594	4	-39	4	7	-1	multi-exon	FALSE	canonical	3	187	junction_1	13.6381816969859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCCCTGGCTCACATG	8228	False	NA	13	True	AATAAA	-14	NA	126376133	126379682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126377126_126377225_126377270_126377477_126377587_126379198
Isoform_171462_10	chr7	+	2390	11	FSM	ENSMUSG00000052301.15	ENSMUST00000064110.14	2538	11	147	1	2	-1	multi-exon	FALSE	canonical	1	1	junction_1	8.4829240241794	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTTGAGTTTGCTGG	818	False	NA	3	True	AATAAA	-14	NA	126446871	126451876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126447205_126447586_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
Isoform_171463_75	chr7	+	2512	8	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-17	208	intron_retention	FALSE	non_canonical	0	0	junction_7	87.8049787068722	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1459	False	NA	50	True	AATAAA	-24	NA	126461126	126464298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905_126464068_126464087
Isoform_171464_168	chr7	+	2049	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	467	250	0	209	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGTCCCAAACCGTCAT	1943	False	NA	51	True	AATAAA	-25	NA	126461610	126464299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
Isoform_171465_20	chr7	+	2299	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	467	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTCTCAGGCTCAGT	1943	False	NA	8	True	NA	NA	NA	126461610	126464549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
Isoform_171468_3	chr7	+	2337	4	NNC	ENSMUSG00000042606.10	novel	937	3	NA	NA	2	204	intron_retention	FALSE	non_canonical	0	0	junction_3	94.9959063445485	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATTGGTCCCAAACC	1945	False	NA	46	True	AATAAA	-20	NA	126461612	126464294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_126461689_126461771_126462099_126462340_126464068_126464087
Isoform_17147_8	chr11	-	2866	4	NIC	ENSMUSG00000020946.14	novel	1044	5	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	169.969278269797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCACTTGGCATTCTT	NA	False	NA	-3	True	AATAAA	-26	NA	103588535	103567679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_103570224_103577407_103577541_103578350_103578460_103588455
Isoform_171470_11	chr7	+	2627	7	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-32	211	intron_retention	FALSE	non_canonical	0	0	junction_6	94.1973401370171	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCCCAAACCGTCATGC	1444	False	NA	53	True	AATAAA	-27	NA	126461111	126464301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_126461689_126461771_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905_126464068_126464087
Isoform_171478_3	chr7	+	2589	3	NNC	ENSMUSG00000042606.10	novel	431	2	NA	NA	-1	200	intron_retention	FALSE	non_canonical	0	0	junction_2	133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCCAAATTGGTCCCA	1942	False	NA	42	True	AATAAA	-16	NA	126461609	126464290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_126463834_126463905_126464068_126464087
Isoform_171479_269	chr7	+	1674	6	FSM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	1	1	1	-1	multi-exon	FALSE	canonical	3	174	junction_2	8.49470423263812	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGACTCTCGGGTGA	NA	False	NA	24	True	AATAAA	-16	NA	126528051	126544802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
Isoform_171483_557	chr7	+	1860	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	451	-337	-13	0	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	22	True	NA	NA	NA	126575536	126579671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
Isoform_171484_50	chr7	+	1933	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	378	-337	-86	0	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	22	True	NA	NA	NA	126575463	126579671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
Isoform_171491_211	chr7	+	1879	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	52	1	-13	-1	multi-exon	FALSE	canonical	3	90	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTTTGTATGACCTCT	NA	False	NA	5	True	NA	NA	NA	126690582	126693157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126690645_126691340
Isoform_171494_4	chr7	+	1924	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	71	-63	6	63	multi-exon	FALSE	canonical	3	90	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	69	True	NA	NA	NA	126690601	126693221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126690645_126691340
Isoform_171495_3	chr7	+	1975	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	21	-64	21	64	multi-exon	FALSE	canonical	3	90	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	70	True	NA	NA	NA	126690551	126693222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126690645_126691340
Isoform_171497_23	chr7	+	800	8	NIC	ENSMUSG00000030672.13	novel	653	7	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_2	781.490099431979	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	219	False	NA	32	True	AATAAA	-24	NA	126808038	126813460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_126808124_126808455_126808571_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_1715_52	chr10	-	5112	4	FSM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	-19	5	-19	2	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTTTGCATTTTAGAT	NA	False	NA	-16	True	AATAAA	-17	NA	17823834	17774787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_17778126_17783781_17783937_17790739_17791781_17823256
Isoform_171500_13	chr7	+	753	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	2	11	2	0	multi-exon	FALSE	canonical	3	142	junction_1	683.213892000318	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	2962	False	NA	31	True	AATAAA	-23	NA	126810781	126813459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_171501_16	chr7	+	725	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	31	10	31	0	multi-exon	FALSE	canonical	3	142	junction_1	683.213892000318	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	2991	False	NA	32	True	AATAAA	-24	NA	126810810	126813460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_171502_30	chr7	+	657	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	96	13	96	-2	multi-exon	FALSE	canonical	3	142	junction_1	683.213892000318	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGGTGGCAATTTCAGT	3056	False	NA	29	True	AATAAA	-21	NA	126810875	126813457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_171504_104	chr7	+	683	7	NIC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	184	junction_1	671.232365793612	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	3977	False	NA	32	True	AATAAA	-24	NA	126811796	126813460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_126811880_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_171507_30	chr7	+	750	6	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1103	10	32	0	3prime_fragment	FALSE	canonical	3	600	junction_1	477.333007448678	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4063	False	NA	32	True	AATAAA	-24	NA	126811882	126813460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_171510_241	chr7	+	567	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1497	10	-9	0	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4457	False	NA	32	True	AATAAA	-24	NA	126812276	126813460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_171511_261	chr7	+	488	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1576	10	70	0	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4536	False	NA	32	True	AATAAA	-24	NA	126812355	126813460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_171513_10	chr7	+	556	4	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1683	12	177	-1	3prime_fragment	FALSE	canonical	3	1768	junction_3	20.2155056000751	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGGCAATTTCAGTG	4643	False	NA	30	True	AATAAA	-22	NA	126812462	126813458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_171519_247	chr7	+	2993	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	212	137	18	-1	multi-exon	FALSE	canonical	3	192	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGGTTATGTGT	8320	False	NA	27	True	AATAAA	-17	NA	126832444	126837214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126832659_126834435
Isoform_171522_7	chr7	+	3399	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	-42	-15	-42	15	multi-exon	FALSE	canonical	3	192	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTAAGCTGCTTTCATTG	8066	False	NA	15	True	AATAAA	-16	NA	126832190	126837366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126832659_126834435
Isoform_171526_64	chr7	+	3209	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	-6	139	-6	-3	multi-exon	FALSE	canonical	3	192	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGTGTGTGGTTATGT	8102	False	NA	25	True	AATAAA	-15	NA	126832226	126837212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126832659_126834435
Isoform_171527_9	chr7	+	3494	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	-288	136	-288	0	multi-exon	FALSE	canonical	3	192	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGGTTATGTGTA	7820	False	NA	28	True	AATAAA	-18	NA	126831944	126837215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126832659_126834435
Isoform_171528_29	chr7	+	3146	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	212	-16	18	16	multi-exon	FALSE	canonical	3	192	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGCTGCTTTCATTGG	8320	False	NA	16	True	AATAAA	-17	NA	126832444	126837367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126832659_126834435
Isoform_171529_21	chr7	+	3246	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	-42	138	-42	-2	multi-exon	FALSE	canonical	3	192	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTGTGTGGTTATGTG	8066	False	NA	26	True	AATAAA	-16	NA	126832190	126837213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126832659_126834435
Isoform_171532_57	chr7	+	3014	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	26	3	-13	-3	multi-exon	FALSE	canonical	3	35	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGTGTGTGGTTATGT	8328	False	NA	25	True	AATAAA	-15	NA	126832452	126837212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126832690_126834435
Isoform_171535_18	chr7	+	3232	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	-191	2	3	-2	multi-exon	FALSE	canonical	3	35	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTGTGTGGTTATGTG	8111	False	NA	26	True	AATAAA	-16	NA	126832235	126837213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126832690_126834435
Isoform_171540_173	chr7	+	1213	3	FSM	ENSMUSG00000054716.5	ENSMUST00000052509.6	1484	3	269	2	269	-2	multi-exon	FALSE	canonical	3	88	junction_1	20	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACGATGCCTGTAAGT	NA	False	NA	29	True	AATAAA	-14	NA	126843714	126853973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126843781_126844156_126844307_126852976
Isoform_171543_4	chr7	+	2812	2	FSM	ENSMUSG00000086502.2	ENSMUST00000144796.2	1778	2	51	-1085	51	1085	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGTACTAGGAACAGAG	954	False	NA	NA	False	NA	NA	NA	127047862	127060617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127048744_127058686
Isoform_171545_15	chr7	+	2289	12	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	65.961797107765	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070188	127075929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127070292_127070876_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_171547_150	chr7	+	2102	12	ISM	ENSMUSG00000030822.16	ENSMUST00000106292.8	2175	13	646	-12	-2	12	3prime_fragment	FALSE	canonical	3	60	junction_1	50.8389126685683	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCCTCCAGCAGAGTT	NA	False	NA	21	True	TATAAA	-26	NA	127070188	127075943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_171550_13	chr7	+	2029	12	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_11	69.1986002820269	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	False	NA	8	True	TATAAA	-13	NA	127070188	127075930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075615
Isoform_171551_12	chr7	+	2016	11	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	68.5448758113982	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070188	127075929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127070292_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_171552_13	chr7	+	2492	10	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	25	-25	25	24	intron_retention	FALSE	canonical	3	203	junction_3	16.1229841308596	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAGTTTGAAATCAATTA	NA	False	NA	33	True	TATAAA	-38	NA	127070686	127075955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393
Isoform_171554_563	chr7	+	2378	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	24	0	24	0	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	False	NA	8	True	TATAAA	-13	NA	127070685	127075930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_171556_57	chr7	+	2528	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	-126	0	-85	0	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	False	NA	8	True	TATAAA	-13	NA	127070535	127075930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_171559_31	chr7	+	2595	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	-193	0	-152	0	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	False	NA	8	True	TATAAA	-13	NA	127070468	127075930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_171561_18	chr7	+	2343	11	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_10	56.3490017657811	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	False	NA	8	True	TATAAA	-13	NA	127070660	127075930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075615
Isoform_171567_14	chr7	+	5175	18	FSM	ENSMUSG00000042423.10	ENSMUST00000205432.3	4166	18	-1012	3	-1012	1	multi-exon	TRUE	canonical	3	16	junction_6	6.52702659137892	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCCCTACCCTCCGGCT	NA	False	NA	26	True	TATAAA	-20	NA	127077358	127090675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
Isoform_171572_18	chr7	+	1797	4	ISM	ENSMUSG00000053877.13	ENSMUST00000189136.7	1960	6	30	2103	5	765	5prime_fragment	FALSE	canonical	3	58	junction_2	2.05480466765633	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	127111203	127119906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752
Isoform_171576_8	chr7	+	2461	8	FSM	ENSMUSG00000053877.13	ENSMUST00000185401.7	2904	8	36	407	-8	-407	multi-exon	FALSE	canonical	3	43	junction_5	6.55588223176215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTAGAGCTTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	127111190	127125805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802
Isoform_171577_18	chr7	+	2008	10	NIC	ENSMUSG00000053877.13	novel	2048	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	20	junction_9	13.2282899242868	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGTTATTGAGTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	127111198	127128495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306
Isoform_171578_17	chr7	+	2011	10	FSM	ENSMUSG00000053877.13	ENSMUST00000188124.7	2048	10	36	1	-8	-1	multi-exon	FALSE	canonical	3	18	junction_9	13.723009424114	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCAGTTATTGAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	127111190	127128493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309
Isoform_171579_4	chr7	+	1881	10	NIC	ENSMUSG00000053877.13	novel	4025	21	NA	NA	-16	7	intron_retention	FALSE	canonical	2	5	junction_1	18.742570544546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGAGTATTATGTGCT	NA	False	NA	NA	False	AATAAA	-26	NA	127111620	127128501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127111803_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309
Isoform_171582_22	chr7	+	1970	3	FSM	ENSMUSG00000030815.12	ENSMUST00000151908.8	1918	3	-21	-31	3	31	multi-exon	FALSE	canonical	3	119	junction_1	14	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTCCATCCAAAATCC	NA	False	NA	NA	False	NA	NA	NA	127172554	127178489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127172629_127173025_127173139_127176706
Isoform_171584_11	chr7	+	1558	10	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	38.5313724991294	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATGTCTGCTGTCTAG	NA	False	NA	25	True	AATAAA	-26	NA	127172522	127182478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_171585_36	chr7	+	1469	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	33.5016324229134	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATGTCTGCTGTCTAG	NA	False	NA	25	True	AATAAA	-26	NA	127172556	127182478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_171587_30	chr7	+	1507	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	38.180492401225	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGTGCCATGTCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	127172554	127182472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127172629_127173025_127173139_127176706_127176861_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_171589_78	chr7	+	1621	10	FSM	ENSMUSG00000030815.12	ENSMUST00000033086.8	1570	10	-52	1	12	1	multi-exon	FALSE	canonical	3	46	junction_3	31.2018517968975	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATGTCTGCTGTCTAG	NA	False	NA	25	True	AATAAA	-26	NA	127172523	127182478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_171590_8	chr7	+	1865	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	65	junction_3	23.0475052879916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGCCATGTCTGCTGTC	NA	False	NA	22	True	AATAAA	-23	NA	127172540	127182475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127172629_127173025_127173139_127176706_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_171594_4	chr7	+	1701	9	FSM	ENSMUSG00000030815.12	ENSMUST00000154891.8	1722	9	14	7	14	-2	multi-exon	FALSE	canonical	3	16	junction_2	40.5768945953236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCAGTGCCATGTCTG	NA	False	NA	17	True	AATAAA	-18	NA	127172768	127182470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127173139_127176706_127176819_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_171596_8	chr7	+	1773	9	FSM	ENSMUSG00000030815.12	ENSMUST00000121004.3	1840	9	62	5	8	0	multi-exon	FALSE	canonical	3	46	junction_2	32.8954309137303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGTGCCATGTCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	127172762	127182472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_171597_3	chr7	+	2038	8	NIC	ENSMUSG00000030815.12	novel	1840	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	65	junction_2	24.628670864897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGTGCCATGTCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	127172761	127182472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127173139_127176706_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_171599_913	chr7	+	4075	20	FSM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	-2	1206	-2	-1	multi-exon	FALSE	canonical	3	259	junction_5	49.1177002358039	913	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCCGTCCATTTGGT	NA	False	NA	20	True	AATAAA	-21	NA	127187936	127202765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
Isoform_171627_15	chr7	+	1345	3	FSM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	1	6	1	-6	multi-exon	FALSE	canonical	3	6	junction_1	5.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGTTGTTCCATGTGG	NA	False	NA	NA	False	AATAAA	-31	NA	127311908	127317358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127311952_127313096_127313216_127316175
Isoform_171628_4	chr7	+	1373	3	FSM	ENSMUSG00000042340.7	ENSMUST00000206506.2	784	3	4	-593	4	-9	multi-exon	FALSE	canonical	1	4	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATAGTTGTTCCATG	NA	False	NA	NA	False	AATAAA	-28	NA	127312119	127317355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127312194_127313096_127313216_127316175
Isoform_171629_3	chr7	+	3004	11	NIC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	36.3209306048179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGCTCTTCCCATTC	546	False	NA	10	True	NA	NA	NA	127344959	127368106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127345040_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_17163_20	chr11	-	3778	22	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_21	89.2116899491472	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTATAGACCAGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	103844848	103712609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103821901_103821950_103844795
Isoform_171630_3	chr7	+	2762	11	NIC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	30	-7	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	36.3209306048179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGTACTGAAGTGTTA	574	False	NA	4	True	NA	NA	NA	127344987	127367892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127345040_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171632_10	chr7	+	3663	11	NIC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.2511653931107	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGACTTTTTGTGTC	564	False	NA	14	True	TATAAA	-18	NA	127344977	127368654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127345040_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171636_12	chr7	+	4087	11	NIC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	-251	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	29.982661656364	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	1282	False	NA	15	True	TATAAA	-19	NA	127345695	127368655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171640_3	chr7	+	4472	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-507	-555	482	0	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	1026	False	NA	15	True	TATAAA	-19	NA	127345439	127368655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171641_17	chr7	+	3669	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-251	-8	-251	8	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCTTCCCATTCTT	1282	False	NA	12	True	NA	NA	NA	127345695	127368108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171642_7	chr7	+	3921	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-511	0	478	0	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCAGTTTGGCTCTTC	1022	False	NA	4	True	NA	NA	NA	127345435	127368100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171643_12	chr7	+	4202	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-240	-552	-240	-3	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCGCTGACTTTTTGTG	1293	False	NA	12	True	TATAAA	-16	NA	127345706	127368652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171650_3	chr7	+	3786	10	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	35.1170880988616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCGGGGCCGCTGACTT	1484	False	NA	6	True	TATAAA	-10	NA	127345897	127368646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171652_7	chr7	+	3625	10	FSM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	-178	2	-51	-2	multi-exon	FALSE	canonical	3	25	junction_5	29.4282974593846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGCTGACTTTTTGTGT	2854	False	NA	13	True	TATAAA	-17	NA	127347267	127368653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171655_12	chr7	+	3738	10	ISM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	1339	-555	-33	0	3prime_fragment	FALSE	canonical	3	52	junction_5	24.111367126137	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	2872	False	NA	15	True	TATAAA	-19	NA	127347285	127368655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171657_4	chr7	+	2849	9	FSM	ENSMUSG00000030811.15	ENSMUST00000188580.3	2601	9	-47	-201	-47	0	multi-exon	FALSE	canonical	2	12	junction_3	39.2681088798531	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCAGTTTGGCTCTTC	2858	False	NA	4	True	NA	NA	NA	127347271	127368100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127347623_127348881_127349026_127349152_127349240_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_171658_5	chr7	+	2965	9	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-31	3	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	35.611620294505	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTTTGGCTCTTCCCA	2874	False	NA	7	True	NA	NA	NA	127347287	127368103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_17166_570	chr11	-	3730	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	34	2	2	-2	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTATAGACCAGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	103844848	103712609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
Isoform_171665_12	chr7	+	2040	2	ISM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	19081	1	19081	-1	3prime_fragment	FALSE	canonical	3	128	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGACTTTTTGTGTC	NA	False	NA	14	True	TATAAA	-18	NA	127366526	127368654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127366836_127366923
Isoform_171667_4	chr7	+	1511	2	ISM	ENSMUSG00000030811.15	ENSMUST00000188580.3	2601	9	19183	-201	19056	0	3prime_fragment	FALSE	canonical	3	128	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCAGTTTGGCTCTTC	NA	False	NA	4	True	NA	NA	NA	127366501	127368100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127366836_127366923
Isoform_171668_18	chr7	+	1997	3	FSM	ENSMUSG00000043964.15	ENSMUST00000121504.2	2141	3	2	142	2	-142	multi-exon	FALSE	canonical	0	0	junction_2	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCTATGGCTATGAATG	NA	False	NA	15	True	AATAAA	-15	NA	127368988	127374180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127369389_127369905_127370051_127372728
Isoform_171669_244	chr7	+	1824	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	30	142	30	-142	multi-exon	FALSE	canonical	3	68	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCTATGGCTATGAATG	NA	False	NA	15	True	AATAAA	-15	NA	127369016	127374180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127369389_127372728
Isoform_171672_4	chr7	+	1993	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	18	-15	18	15	multi-exon	FALSE	canonical	3	68	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAAGGCCTCTGAACTCT	NA	False	NA	NA	False	GATAAA	-30	NA	127369004	127374337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127369389_127372728
Isoform_171673_4	chr7	+	2324	2	FSM	ENSMUSG00000043964.15_ENSMUSG00000030811.15	ENSMUST00000061587.13	1996	2	-471	143	-471	-143	multi-exon	FALSE	canonical	3	68	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCCTATGGCTATGAAT	NA	False	NA	14	True	AATAAA	-14	NA	127368515	127374179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127369389_127372728
Isoform_171674_10	chr7	+	1994	3	NNC	ENSMUSG00000043964.15	novel	2141	3	NA	NA	2	-142	intron_retention	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCTATGGCTATGAATG	NA	False	NA	15	True	AATAAA	-15	NA	127368988	127374180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_127369389_127369908_127370051_127372728
Isoform_171676_3	chr7	+	3726	12	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	8797	-2	7609	2	3prime_fragment	TRUE	canonical	3	26	junction_5	11.9094378852993	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGGTCAGTATC	NA	False	NA	12	True	ATTAAA	-12	NA	127385357	127399289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
Isoform_171677_5	chr7	+	3536	12	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	8987	-2	7799	2	3prime_fragment	FALSE	canonical	3	26	junction_5	11.9094378852993	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGGTCAGTATC	NA	False	NA	12	True	ATTAAA	-12	NA	127385547	127399289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
Isoform_171678_6	chr7	+	3052	10	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	10121	-3	8933	3	3prime_fragment	FALSE	canonical	3	26	junction_3	12.5353820232626	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTTGGTCAGTATCT	NA	False	NA	13	True	ATTAAA	-13	NA	127386681	127399290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
Isoform_171679_6	chr7	+	2850	9	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	10933	-3	9745	3	3prime_fragment	FALSE	canonical	3	26	junction_2	12.3028197987291	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTTGGTCAGTATCT	NA	False	NA	13	True	ATTAAA	-13	NA	127387493	127399290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
Isoform_171685_6	chr7	+	937	2	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	21720	-7	20532	0	3prime_fragment	FALSE	canonical	3	55	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	389	False	NA	17	True	ATTAAA	-17	NA	127398280	127399294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127398401_127398477
Isoform_171686_8	chr7	+	2834	2	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	4	1	4	-1	intron_retention	FALSE	canonical	3	91	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACCTTTTACCC	1888	False	NA	13	True	AATAAA	-14	NA	127399779	127402973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127399887_127400246
Isoform_171687_16	chr7	+	2207	6	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	8	0	-2	0	intron_retention	FALSE	canonical	3	82	junction_2	5.54977477020464	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1892	False	NA	14	True	AATAAA	-15	NA	127399783	127402974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407
Isoform_171689_115	chr7	+	1775	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	54	-1	0	1	multi-exon	FALSE	canonical	3	65	junction_6	10.2794292967395	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTACCTTTTACCCAA	1938	False	NA	15	True	AATAAA	-16	NA	127399829	127402975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
Isoform_171692_3	chr7	+	1895	6	FSM	ENSMUSG00000042289.12	ENSMUST00000132702.8	1899	6	1	3	1	-3	multi-exon	FALSE	canonical	3	65	junction_5	11.2178429299041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTGTCTACCTTTTAC	1885	False	NA	11	True	AATAAA	-12	NA	127399776	127402971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401286_127401407_127401571_127401957
Isoform_171693_5	chr7	+	2657	3	NIC	ENSMUSG00000042289.12	novel	2286	5	NA	NA	5	-1	intron_retention	FALSE	canonical	3	91	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACCTTTTACCC	1943	False	NA	13	True	AATAAA	-14	NA	127399834	127402973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127399887_127400246_127401286_127401407
Isoform_171694_10	chr7	+	1775	7	NIC	ENSMUSG00000042289.12	novel	1828	7	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_1	28.5389597256491	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1885	False	NA	14	True	AATAAA	-15	NA	127399776	127402974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127399887_127400298_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
Isoform_171695_7	chr7	+	1563	9	ISM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	36	10	36	9	intron_retention	FALSE	canonical	3	172	junction_3	23.6207006669997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTTGGAGCCAGCTGTG	NA	False	NA	NA	False	NA	NA	NA	127440971	127448181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559
Isoform_1717_3	chr10	-	4497	2	ISM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	31	13029	31	-9778	5prime_fragment	FALSE	canonical	3	53	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCATTTAATGGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	17823784	17787811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_17791781_17823256
Isoform_171701_48	chr7	+	1430	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	20	6	20	-6	multi-exon	FALSE	canonical	3	172	junction_3	24.7872951327893	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAGCCAGCTGTGCAGT	NA	False	NA	NA	False	NA	NA	NA	127440955	127448185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
Isoform_171702_3	chr7	+	1536	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	-88	8	-88	-8	multi-exon	FALSE	canonical	3	172	junction_3	24.7872951327893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGGAGCCAGCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	127440847	127448183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
Isoform_171704_15	chr7	+	6409	4	NIC	ENSMUSG00000049739.11	novel	6310	3	NA	NA	115	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	56.7802782663136	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTGGTGTGGTTATAT	873	False	NA	19	True	AAAACA	-18	NA	127476082	127485167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127476385_127477074_127477280_127477741_127483091_127484614
Isoform_171708_8	chr7	+	6205	3	NIC	ENSMUSG00000049739.11	novel	2241	3	NA	NA	108	-3	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	73	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACAGCTACTGGTGTGG	866	False	NA	13	True	AAAACA	-12	NA	127476075	127485161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127476385_127477741_127483091_127484614
Isoform_171709_10	chr7	+	6329	4	NNC	ENSMUSG00000049739.11	novel	6310	3	NA	NA	136	1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	55.0474542755814	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTACTGGTGTGGTTAT	894	False	NA	17	True	AAAACA	-16	NA	127476103	127485165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_127476385_127477131_127477280_127477741_127483091_127484614
Isoform_171712_52	chr7	+	7804	3	FSM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	-1501	7	-21	-3	multi-exon	FALSE	canonical	3	99	junction_1	27	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACAGCTACTGGTGTGG	162	False	NA	13	True	AAAACA	-12	NA	127475371	127485161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127477280_127477741_127483091_127484614
Isoform_171713_4	chr7	+	8256	3	FSM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	-1946	0	-466	0	multi-exon	FALSE	canonical	3	99	junction_1	27	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGTGTGGTTATATC	3210	False	NA	20	True	AAAACA	-19	NA	127474926	127485168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127477280_127477741_127483091_127484614
Isoform_17174_5	chr11	-	5049	17	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	71.3474936052417	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGCTTTTCTTGATAC	9750	False	NA	2	True	NA	NA	NA	104360269	104224322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
Isoform_171744_841	chr7	+	1797	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	10	1598	10	15	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	841	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGAGGGCAGGCGAGC	NA	False	NA	43	True	ATTAAA	-35	NA	127503263	127507795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
Isoform_171752_5	chr7	+	3112	3	FSM	ENSMUSG00000030801.11	ENSMUST00000206071.2	1014	3	7	-2105	7	2105	multi-exon	FALSE	canonical	3	295	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTGGTTTTGTAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	127511694	127517367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127511915_127514399_127514475_127514550
Isoform_171753_4	chr7	+	1819	10	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	8	75	8	-75	intron_retention	FALSE	canonical	3	295	junction_2	14.4666495988976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGAGGTACGCAGAGA	NA	False	NA	17	True	AGTAAA	-18	NA	127511695	127524934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280
Isoform_171754_303	chr7	+	1504	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	8	67	8	-67	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACGCAGAGATGCCAAAG	NA	False	NA	25	True	AGTAAA	-26	NA	127511695	127524942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
Isoform_171756_16	chr7	+	1568	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	7	4	7	-4	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGATTCCTCGCTC	NA	False	NA	88	True	NA	NA	NA	127511694	127525005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
Isoform_17176_19	chr11	-	5438	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106972.8	5427	15	-11	0	-11	0	multi-exon	FALSE	canonical	3	85	junction_14	49.1984735120752	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8158	False	NA	-2	True	NA	NA	NA	104333128	104224326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
Isoform_171761_1014	chr7	+	1829	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	36	3671	2	1	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTTTCCCCCAGTTT	1186	False	NA	35	True	ATTAAA	-18	NA	127566664	127581202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
Isoform_171768_392	chr7	+	1825	15	FSM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	3	3	2	0	multi-exon	FALSE	canonical	3	245	junction_3	273.376618440941	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1186	False	NA	34	True	ATTAAA	-17	NA	127566664	127581201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
Isoform_17177_28	chr11	-	5485	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106972.8	5427	15	-112	54	-112	-10	multi-exon	FALSE	canonical	3	85	junction_14	49.1984735120752	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8057	False	NA	-56	True	NA	NA	NA	104333229	104224380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
Isoform_171794_253	chr7	+	3078	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	756	0	756	0	multi-exon	FALSE	canonical	3	88	junction_1	5.30659966456864	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127837284	127844272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
Isoform_171797_31	chr7	+	3876	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	-43	1	-28	-1	multi-exon	FALSE	canonical	3	88	junction_1	5.30659966456864	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGGTCGTCT	NA	False	NA	9	True	ATTAAA	-20	NA	127836485	127844271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
Isoform_1718_4	chr10	-	704	3	FSM	ENSMUSG00000078453.4	ENSMUST00000220110.2	768	3	66	-2	-62	2	multi-exon	FALSE	canonical	2	9	junction_2	67	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTGGTGGCTGTGTT	NA	False	NA	-6	True	AATAAA	-20	NA	17898900	17887009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_17887565_17894586_17894650_17898814
Isoform_171801_10	chr7	+	2594	5	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	743	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	39.1942278913618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127837271	127844272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_127837762_127839053_127839162_127839254_127840042_127842511_127842645_127843196
Isoform_171808_8	chr7	+	967	4	ISM	ENSMUSG00000030781.14	ENSMUST00000118169.8	2277	14	5120	3	222	-3	3prime_fragment	FALSE	canonical	1	3	junction_1	2.82842712474619	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTGTTGTGGCTGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	127869967	127871599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127870125_127870206_127870423_127870920_127871051_127871135
Isoform_171810_247	chr7	+	2591	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	-32	3	-32	-3	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTTTTGTGGTTTC	7110	False	NA	14	True	AATAAA	-19	NA	128125307	128148702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
Isoform_171814_62	chr7	+	4577	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	2	155	2	-4	multi-exon	FALSE	canonical	3	45	junction_6	8.64088073894081	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCAGCGTATGAGAA	7178	False	NA	11	True	ATTAAA	-17	NA	128213085	128297994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
Isoform_171815_32	chr7	+	4605	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	-25	154	7	-3	multi-exon	FALSE	canonical	3	45	junction_6	8.64088073894081	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCAGCGTATGAGAAT	7151	False	NA	12	True	ATTAAA	-18	NA	128213058	128297995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
Isoform_171817_3	chr7	+	4800	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	-56	-10	-24	10	multi-exon	TRUE	canonical	3	45	junction_6	8.64088073894081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTTTTTTTTTTTTTT	7120	False	NA	NA	False	ATTAAA	-13	NA	128213027	128298159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
Isoform_171818_6	chr7	+	4749	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	-4	-11	-4	11	multi-exon	FALSE	canonical	3	45	junction_6	8.64088073894081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTTTTTTTTTTTTTT	7172	False	NA	NA	False	ATTAAA	-14	NA	128213079	128298160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
Isoform_171820_4	chr7	+	4507	19	NIC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	15.9764487161649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCAGCGTATGAGAA	7176	False	NA	11	True	ATTAAA	-17	NA	128213083	128297994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128293475_128293550_128293977_128294107_128295368_128295457_128295899
Isoform_171821_180	chr7	+	3455	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	1	1049	1	-1049	multi-exon	FALSE	canonical	3	121	junction_10	14.275615919341	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCAATATGTTATTTT	1932	False	NA	31	True	ATTAAA	-19	NA	128346667	128385511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
Isoform_171822_3	chr7	+	3693	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	-32	844	-32	-844	multi-exon	TRUE	canonical	3	121	junction_10	14.275615919341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAGAAACAAAAAAAAAAGA	1899	False	NA	NA	False	NA	NA	NA	128346634	128385716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
Isoform_171824_3	chr7	+	2874	19	ISM	ENSMUSG00000042055.14	ENSMUST00000084519.7	4550	29	66	10098	11	0	5prime_fragment	FALSE	canonical	3	127	junction_9	16.4267923275617	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTTGCATGCGT	NA	False	NA	NA	False	AAAACA	-25	NA	129193652	129227364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879
Isoform_171825_3	chr7	+	2690	20	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	0	2473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	38.5736694889057	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTACTTCATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	129193631	129229837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215697_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728
Isoform_171830_184	chr7	+	3724	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-17	0	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247942	130366515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_171831_91	chr7	+	3995	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	10	-2	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130247668	130366512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_171832_33	chr7	+	4032	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-24	0	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247634	130366515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_171843_47	chr7	+	3906	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-24	0	intron_retention	FALSE	canonical	3	48	junction_1	73.3327272702229	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247634	130366515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_171851_14	chr7	+	3720	15	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	24	0	intron_retention	FALSE	canonical	1	5	junction_1	82.3265337741442	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247682	130366515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130248161_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_171857_52	chr7	+	3474	15	FSM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	-9	-1	-9	0	multi-exon	FALSE	canonical	3	28	junction_1	76.8787808096324	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130294485	130366515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_17186_43	chr11	-	4946	16	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	-10	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_15	56.9102997903035	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9750	False	NA	-56	True	NA	NA	NA	104360269	104224380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
Isoform_171861_28	chr7	+	3713	15	FSM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	-248	-1	-39	0	multi-exon	FALSE	canonical	3	28	junction_1	76.8787808096324	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130294246	130366515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_171864_18	chr7	+	3299	14	ISM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	23881	-1	2969	0	3prime_fragment	FALSE	canonical	3	244	junction_1	32.4111895354149	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130318375	130366515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_171872_10	chr7	+	5875	12	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	4	-5	intron_retention	FALSE	non_canonical	2	10	junction_11	70.21713666187	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467620	130515037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130511658_130511677
Isoform_171874_105	chr7	+	3533	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467618	130515038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_171875_18	chr7	+	3577	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-40	-4	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467574	130515038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_171876_41	chr7	+	3717	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	180	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTTGAATTCTTGG	NA	False	NA	10	True	AATAAA	-18	NA	130467618	130515222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_171879_10	chr7	+	3562	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	65.7594522145338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467618	130515037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
Isoform_171882_11	chr7	+	3637	13	FSM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	133	7	2	3	multi-exon	FALSE	canonical	3	31	junction_12	62.5128320160482	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACGTCCCCTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	130467618	130515035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
Isoform_171883_7	chr7	+	3684	13	FSM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	89	4	-40	-4	multi-exon	FALSE	canonical	3	31	junction_12	62.5128320160482	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467574	130515038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
Isoform_171884_6	chr7	+	3530	12	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-35	-5	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	66.4602037138463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467579	130515037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
Isoform_171887_4	chr7	+	3396	11	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	71.4098032485736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467611	130515038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_171892_20	chr7	+	3737	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-9	-1427	2	183	multi-exon	FALSE	canonical	3	88	junction_1	52.7225441975884	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTGAATTCTTGGGGT	NA	False	NA	13	True	AATAAA	-21	NA	130467618	130515225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_171893_40	chr7	+	3549	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-9	-1239	2	-5	multi-exon	FALSE	canonical	3	88	junction_1	52.7225441975884	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467618	130515037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_171895_6	chr7	+	3764	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-39	-1424	-26	180	multi-exon	FALSE	canonical	3	88	junction_1	52.7225441975884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTTGAATTCTTGG	NA	False	NA	10	True	AATAAA	-18	NA	130467588	130515222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_171896_9	chr7	+	3574	13	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	74.0793024775177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467623	130515037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
Isoform_171899_7	chr7	+	3657	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	71.3206764472189	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467618	130515038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
Isoform_1719_3	chr10	-	682	3	FSM	ENSMUSG00000078453.4	ENSMUST00000218994.2	425	3	4	-261	4	1	multi-exon	FALSE	canonical	1	1	junction_2	71	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCTGGTGGCTGTGT	NA	False	NA	-7	True	AATAAA	-19	NA	17898622	17887010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_17887565_17894586_17894654_17898561
Isoform_171902_6	chr7	+	3508	12	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	75.7006937968359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467618	130515037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
Isoform_171904_5	chr7	+	3711	14	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	91.649318781626	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467618	130515038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_171906_4	chr7	+	2816	5	ISM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	38893	-1240	-113	-4	3prime_fragment	FALSE	canonical	3	137	junction_4	44.3931300991494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130506520	130515038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_171907_4	chr7	+	2771	4	ISM	ENSMUSG00000040268.18	ENSMUST00000048180.12	3321	10	38884	-5	-110	-5	3prime_fragment	FALSE	canonical	3	24	junction_3	103.353761421634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130506523	130515037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_130506665_130507120_130507185_130510065_130510156_130512561
Isoform_17191_14	chr11	-	5305	14	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	3	61	junction_11	60.3367277042696	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8191	False	NA	-3	True	NA	NA	NA	104333095	104224327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
Isoform_171910_195	chr7	+	2058	9	FSM	ENSMUSG00000006205.14	ENSMUST00000006367.8	2041	9	-21	4	-21	-4	multi-exon	FALSE	canonical	3	73	junction_3	16.015617378047	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTTTGGCGTGCTTCTT	6601	False	NA	15	True	ATTAAA	-16	NA	130537911	130587386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586692
Isoform_171911_160	chr7	+	1116	6	FSM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	17	2	1	1	multi-exon	FALSE	canonical	3	133	junction_2	32.2713495224479	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCTGATTTGGATAAAT	NA	False	NA	20	True	ATTAAA	-20	NA	130972886	130989566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130989346
Isoform_171912_3	chr7	+	1187	6	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	73.3746550247427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTGTTTATACTTACA	NA	False	NA	NA	False	AATAAA	-20	NA	130972863	130994496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130994228
Isoform_171913_3	chr7	+	910	6	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	89.7226838653414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCTGATTTGGATAAAT	NA	False	NA	20	True	ATTAAA	-20	NA	130972863	130989566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130986527_130986594_130989346
Isoform_171914_53	chr7	+	822	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	59.6547357717726	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCTGATTTGGATAAAT	NA	False	NA	20	True	ATTAAA	-20	NA	130972885	130989566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130989346
Isoform_171919_240	chr7	+	3300	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	46	2735	46	0	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCTCCCTTTTTATG	NA	False	NA	21	True	AATAAA	-25	NA	131012375	131047938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
Isoform_171926_34	chr7	+	1393	9	FSM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	12	723	1	8	multi-exon	FALSE	canonical	3	44	junction_4	579.695609781547	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGGGTGTTTGTAA	NA	False	NA	24	True	AATAAA	-19	NA	131162120	131172901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
Isoform_171931_985	chr7	+	1331	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	169	718	0	10	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGTGTTTGTAAAC	NA	False	NA	26	True	AATAAA	-21	NA	131162119	131172903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
Isoform_171932_204	chr7	+	2051	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	170	-3	1	0	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTGTGTTACCTTGG	NA	False	NA	11	True	ATTAAA	-20	NA	131162120	131173624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
Isoform_171947_443	chr7	+	1555	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	54	3	-15	0	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTGACTCAGCCTTTC	NA	False	NA	9	True	AATAAA	-17	NA	132212421	132308146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
Isoform_171948_25	chr7	+	1927	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	12	-327	12	327	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	132212379	132308476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
Isoform_171951_6	chr7	+	1516	6	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	2	20	junction_5	121.921942241747	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTGACTCAGCCTTTC	NA	False	NA	9	True	AATAAA	-17	NA	132212368	132308146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132307320
Isoform_171952_21	chr7	+	1213	5	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	131.685942681822	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTGACTCAGCCTTTC	NA	False	NA	9	True	AATAAA	-17	NA	132212421	132308146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_132212560_132243252_132243317_132244215_132244309_132251986_132252079_132307320
Isoform_171955_530	chr7	+	2875	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	16	1	-3	0	multi-exon	FALSE	canonical	3	195	junction_8	19.6273883896967	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGATATTTTAGTGTCTG	NA	False	NA	15	True	AATAAA	-17	NA	132460969	132486839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
Isoform_171958_7	chr7	+	3351	9	NNC	ENSMUSG00000030965.20	novel	2892	9	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	75.4543529228102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAGTGTCTGTCTTAG	NA	False	NA	21	True	AATAAA	-23	NA	132460969	132486845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480813_132482495_132482611_132484763
Isoform_171959_25	chr7	+	2838	9	FSM	ENSMUSG00000030965.20	ENSMUST00000129552.2	2827	9	-8	-3	-3	0	multi-exon	FALSE	canonical	3	30	junction_5	67.4532245337464	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATATTTTAGTGTCTGT	NA	False	NA	16	True	AATAAA	-18	NA	132460969	132486840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478364_132478447_132480257_132480343_132482495_132482611_132484763
Isoform_17196_5	chr11	-	5389	15	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-107	-1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_14	72.5383783009423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8062	False	NA	-3	True	NA	NA	NA	104333224	104224327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104332550
Isoform_171967_11	chr7	+	3635	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	14	1359	14	1036	multi-exon	TRUE	canonical	3	56	junction_1	22.7129157795708	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTGGTCAATGCATTG	NA	False	NA	5	True	AATAAA	-16	NA	132532884	132586761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
Isoform_171968_3	chr7	+	4974	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	33	1	33	-1	multi-exon	FALSE	canonical	3	56	junction_1	22.7129157795708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGATTCAGATCTGAC	NA	False	NA	3	True	ATTAAA	-15	NA	132532903	132588119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
Isoform_17197_6	chr11	-	4857	16	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-587	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_14	75.5451299996675	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTTTGTCAGGCTTTT	9745	False	NA	-6	True	NA	NA	NA	104360274	104224330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
Isoform_171970_16	chr7	+	2804	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	36	2168	36	227	multi-exon	FALSE	canonical	3	56	junction_1	22.7129157795708	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGACAGAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	132532906	132585952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
Isoform_171972_3	chr7	+	4002	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	36	970	36	-970	multi-exon	FALSE	canonical	3	56	junction_1	22.7129157795708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTAGTTCTCTCTCTT	NA	False	NA	NA	False	AAAAAG	-21	NA	132532906	132587150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
Isoform_171978_270	chr7	+	4476	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	152	796	2	-4	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTTGGTAGTTCCC	NA	False	NA	2	True	AATAAA	-15	NA	133239423	133273904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
Isoform_171979_11	chr7	+	5271	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	151	2	1	-2	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTGTAATTACTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	133239422	133274698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
Isoform_171985_31	chr7	+	4375	24	FSM	ENSMUSG00000039990.17	ENSMUST00000128901.9	4380	24	2	3	2	-3	multi-exon	FALSE	canonical	3	27	junction_6	37.3605535837356	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTTGGTAGTTCCCA	NA	False	NA	3	True	AATAAA	-16	NA	133239423	133273905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
Isoform_171987_5	chr7	+	4372	24	NIC	ENSMUSG00000039990.17	novel	4380	24	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	46.475556109529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTTGGTAGTTCCC	NA	False	NA	2	True	AATAAA	-15	NA	133239422	133273904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273097
Isoform_171992_2585	chr7	+	1230	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	8	6	-7	-6	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	2585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATACTTGAAGTGTTC	1315	False	NA	17	True	AATAAA	-18	NA	133311069	133322868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
Isoform_1720_4	chr10	-	733	3	FSM	ENSMUSG00000078453.4	ENSMUST00000220433.2	275	3	-15	-443	-15	2	multi-exon	FALSE	canonical	3	8	junction_2	67.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTGGTGGCTGTGTT	NA	False	NA	-6	True	AATAAA	-20	NA	17898853	17887009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_17887565_17894586_17894654_17898742
Isoform_17200_15	chr11	-	5299	14	FSM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	-115	326	-115	-10	multi-exon	FALSE	canonical	3	79	junction_6	53.9110597824222	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8054	False	NA	-56	True	NA	NA	NA	104333232	104224380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
Isoform_172001_20	chr7	+	2601	21	FSM	ENSMUSG00000058325.7	ENSMUST00000211593.2	2589	21	8	-20	4	20	multi-exon	FALSE	canonical	3	101	junction_11	23.1652217774836	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTGGGTTTTTCTTAG	NA	False	NA	27	True	NA	NA	NA	134272423	134384935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475
Isoform_172002_7	chr7	+	2411	22	NIC	ENSMUSG00000058325.7	novel	3557	27	NA	NA	18	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	35.1926347685153	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGATGTGTTTCTGTTTT	NA	False	NA	5	True	NA	NA	NA	134272437	134384913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134384730
Isoform_172006_149	chr7	+	6800	52	FSM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	8	-1	4	1	multi-exon	FALSE	canonical	3	98	junction_42	17.5348283073368	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGACTCCTGGTGGCTG	NA	False	NA	3	True	AATAAA	-10	NA	134272423	134775369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
Isoform_172007_5	chr7	+	6859	52	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	13	6	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_11	24.2862748264169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTGGTGGCTGGCCTC	NA	False	NA	8	True	AATAAA	-15	NA	134272432	134775374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358542_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
Isoform_17201_18	chr11	-	5245	14	FSM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	-11	276	-11	-4	multi-exon	FALSE	canonical	3	79	junction_6	53.9110597824222	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTTTGTCAGGCTTTT	8158	False	NA	-6	True	NA	NA	NA	104333128	104224330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
Isoform_172018_95	chr7	+	832	5	FSM	ENSMUSG00000054612.5	ENSMUST00000081510.4	2894	5	-19	2081	-19	-2081	multi-exon	FALSE	canonical	3	172	junction_1	21.7887585695009	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496323	136729914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_136496417_136552996_136553134_136687677_136687839_136723217_136723358_136729613
Isoform_172021_8	chr7	+	995	6	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-24	-2080	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	98.1150345258055	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGATGTGGCTGCCCTT	NA	False	NA	31	True	ATTAAA	-22	NA	136496318	136729915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_136496417_136521584_136521742_136552996_136553134_136687677_136687839_136723217_136723358_136729613
Isoform_172028_2341	chr7	+	1228	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	46	411	4	-411	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	2341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATTGCGTGTAGAAT	NA	False	NA	30	True	AATAAA	-18	NA	137039388	137069912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
Isoform_172030_74	chr7	+	1314	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	-40	411	-40	-411	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATTGCGTGTAGAAT	NA	False	NA	30	True	AATAAA	-18	NA	137039302	137069912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
Isoform_172046_332	chr7	+	2064	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	15	2	-12	1	multi-exon	FALSE	canonical	3	482	junction_4	89.4111814875522	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCACTGCAGTCTTTAT	NA	False	NA	18	True	AATAAA	-32	NA	138448102	138484784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
Isoform_172051_10	chr7	+	2169	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	5	-93	5	93	multi-exon	FALSE	canonical	3	482	junction_4	89.4111814875522	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAAATGGTCAAGTTTG	NA	False	NA	113	True	AATAAA	-27	NA	138448092	138484879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
Isoform_172060_40	chr7	+	1868	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	212.306863011144	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448131	138484783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
Isoform_172061_11	chr7	+	1582	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	5	-325	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	212.306863011144	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAAGTCTGAGCCTT	NA	False	NA	23	True	AATAAA	-19	NA	138448092	138484458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
Isoform_17207_48	chr11	-	4757	15	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-582	-10	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_14	61.3522782039618	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9750	False	NA	-56	True	NA	NA	NA	104360269	104224380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
Isoform_172071_12	chr7	+	1777	7	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	229.285423774726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448318	138484783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
Isoform_172075_31	chr7	+	2606	14	FSM	ENSMUSG00000025478.16	ENSMUST00000026551.15	3552	14	11	935	10	-8	multi-exon	FALSE	canonical	1	1	junction_6	3.36181128975572	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	138665927	138681685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138666078_138669425_138669515_138670074_138670260_138671777_138671943_138673521_138673584_138673676_138673758_138674309_138674379_138674772_138674894_138676083_138676241_138676582_138676725_138677737_138677909_138678385_138678566_138679655_138679822_138680817
Isoform_172076_146	chr7	+	2265	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	-21	813	-21	1	multi-exon	FALSE	canonical	3	49	junction_2	5.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAACAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	138828376	138847078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138828560_138834685_138836077_138846387
Isoform_172077_26	chr7	+	2365	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	-27	719	-27	95	multi-exon	FALSE	canonical	3	49	junction_2	5.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCAAAGCTGCACCTGC	NA	False	NA	NA	False	AATAAA	-31	NA	138828370	138847172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138828560_138834685_138836077_138846387
Isoform_172078_13	chr7	+	2579	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	-335	813	-335	1	multi-exon	FALSE	canonical	3	49	junction_2	5.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAACAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	138828062	138847078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138828560_138834685_138836077_138846387
Isoform_172081_114	chr7	+	2550	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	-6	-1	-1	1	multi-exon	FALSE	canonical	3	21	junction_2	19.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAACAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	138828396	138847078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138828560_138834685_138836382_138846387
Isoform_172082_14	chr7	+	2663	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	-21	-99	-16	99	multi-exon	FALSE	canonical	3	21	junction_2	19.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGCACCTGCCTGA	NA	False	NA	NA	False	AATAAA	-35	NA	138828381	138847176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138828560_138834685_138836382_138846387
Isoform_172083_7	chr7	+	2890	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	-346	-1	-341	1	multi-exon	FALSE	canonical	3	21	junction_2	19.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAACAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	138828056	138847078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138828560_138834685_138836382_138846387
Isoform_172084_15	chr7	+	2785	16	FSM	ENSMUSG00000025477.15	ENSMUST00000026550.14	2774	16	-17	6	-16	-6	multi-exon	FALSE	canonical	3	14	junction_15	41.2685513839938	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCCTGCTGCTTA	NA	False	NA	13	True	AATAAA	-14	NA	138969008	139159562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158135_139158269
Isoform_172085_324	chr7	+	2844	16	FSM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	-23	5	-23	-5	multi-exon	TRUE	canonical	3	132	junction_13	16.0850517216728	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCCTGCTGCTTAT	NA	False	NA	14	True	AATAAA	-15	NA	138969001	139159563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
Isoform_172087_7	chr7	+	2876	16	NIC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	-23	-5	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	42.9959171188252	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCCTGCTGCTTAT	NA	False	NA	14	True	AATAAA	-15	NA	138969001	139159563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_138969381_139033969_139034012_139057910_139058044_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
Isoform_172088_1097	chr7	+	1191	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	33	3	33	-3	multi-exon	FALSE	canonical	3	805	junction_1	0	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTGTGAATGAATTCG	NA	False	NA	NA	False	AATAAA	-17	NA	139523734	139525022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139524343_139524439
Isoform_172089_306	chr7	+	1226	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	0	1	0	-1	multi-exon	FALSE	canonical	3	805	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTGAATGAATTCGGA	NA	False	NA	NA	False	AATAAA	-19	NA	139523701	139525024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139524343_139524439
Isoform_172091_37	chr7	+	1277	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	-53	3	-53	-3	multi-exon	FALSE	canonical	3	805	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTGTGAATGAATTCG	NA	False	NA	NA	False	AATAAA	-17	NA	139523648	139525022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139524343_139524439
Isoform_172096_7	chr7	+	1867	5	FSM	ENSMUSG00000025470.12	ENSMUST00000210882.2	1757	5	-111	1	5	-1	multi-exon	FALSE	canonical	3	304	junction_1	31.3318926973779	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616329	139620514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238
Isoform_172097_322	chr7	+	1072	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	5	-1	5	1	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTCTTCTTCATGT	NA	False	NA	20	True	AATAAA	-17	NA	139616329	139620516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
Isoform_1721_140	chr10	-	752	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	92	2	22	2	multi-exon	FALSE	canonical	3	143	junction_1	12	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTGGTGGCTGTGTT	NA	False	NA	-6	True	AATAAA	-20	NA	17898944	17887009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_17887565_17894586_17894654_17898814
Isoform_17210_4	chr11	-	4703	15	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-582	-10	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_13	82.7458920615472	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9750	False	NA	-56	True	NA	NA	NA	104360269	104224380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
Isoform_172100_8	chr7	+	1119	6	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	132.693029206511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616327	139620514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619406_139620155
Isoform_172101_4	chr7	+	1399	5	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	6	3	intron_retention	FALSE	canonical	3	304	junction_1	30.878795313289	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTCTTCTTCATGTGT	NA	False	NA	22	True	AATAAA	-19	NA	139616330	139620518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_139616520_139616732_139617335_139617428_139617554_139619238_139619359_139620155
Isoform_172102_10	chr7	+	999	5	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	147.438758472798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATCTGTTCTTCTTCA	NA	False	NA	17	True	AATAAA	-14	NA	139616325	139620513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_139616520_139617132_139617335_139617428_139617554_139619238_139619359_139620155
Isoform_172103_14	chr7	+	903	5	ISM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	385	1	8	-1	3prime_fragment	FALSE	canonical	3	319	junction_3	26.6176633084123	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616709	139620514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
Isoform_172105_18	chr7	+	617	5	FSM	ENSMUSG00000025467.9	ENSMUST00000026540.9	620	5	0	3	0	-3	multi-exon	FALSE	canonical	3	31	junction_4	1.08972473588517	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGAATGCGTGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	139673307	139677110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139673382_139674944_139675012_139676062_139676116_139676586_139676694_139676794
Isoform_172108_461	chr7	+	1738	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	27	2890	-24	0	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705596	139714247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_17211_6	chr11	-	5164	13	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-26	-1	combination_of_known_splicesites	FALSE	canonical	3	61	junction_10	65.4221335295292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8143	False	NA	-3	True	NA	NA	NA	104333143	104224327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
Isoform_172110_18	chr7	+	4631	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	27	-3	-24	3	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATAAATAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	139705596	139717140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_172111_9	chr7	+	3188	7	NNC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	89.1099508098469	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705596	139714247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139710109_139711673_139712293_139712452_139713922
Isoform_172114_7	chr7	+	1619	6	ISM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	587	2892	536	-2	3prime_fragment	FALSE	canonical	3	213	junction_1	25.4165300542777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTTGTGTAGAGTACTT	NA	False	NA	20	True	CATAAA	-12	NA	139706156	139714245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_172115_6	chr7	+	2205	6	NIC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	213	junction_1	25.4165300542777	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705572	139714247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_172118_9	chr7	+	2873	5	NIC	ENSMUSG00000025464.16	novel	1024	5	NA	NA	-24	0	intron_retention	FALSE	canonical	3	250	junction_4	15.1554445662277	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705596	139714247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_172119_325	chr7	+	1346	11	FSM	ENSMUSG00000039018.16	ENSMUST00000036977.9	1595	11	69	180	-16	159	multi-exon	FALSE	canonical	3	445	junction_3	26.942345851837	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717545	139730519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
Isoform_17212_4	chr11	-	5208	13	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-123	-10	combination_of_known_splicesites	FALSE	canonical	3	61	junction_10	65.4221335295292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8046	False	NA	-56	True	NA	NA	NA	104333240	104224380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
Isoform_172120_101	chr7	+	1373	11	FSM	ENSMUSG00000039018.16	ENSMUST00000036977.9	1595	11	43	179	-42	160	multi-exon	FALSE	canonical	3	445	junction_3	26.942345851837	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATCTCTCTCTGGC	NA	False	NA	22	True	AATAAA	-23	NA	139717519	139730520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
Isoform_172124_80	chr7	+	677	4	FSM	ENSMUSG00000025481.13	ENSMUST00000106050.8	719	4	123	-81	123	2	multi-exon	FALSE	canonical	3	242	junction_1	5.43650214343336	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTGAACCTATCATTGG	NA	False	NA	29	True	AATAAA	-19	NA	140415053	140417881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140415172_140415524_140415665_140416659_140416796_140417598
Isoform_172131_40	chr7	+	3295	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	-476	587	-476	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140436393	140443056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_172132_654	chr7	+	2356	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	463	587	-2	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437332	140443056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_172133_228	chr7	+	2382	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	437	587	-28	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437306	140443056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_172136_23	chr7	+	3328	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	-509	587	-509	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140436360	140443056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_17214_21	chr11	-	4710	14	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-582	-2	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_10	70.7434735735703	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTGTCAGGCTTTTCT	9750	False	NA	-4	True	NA	NA	NA	104360269	104224328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
Isoform_172148_22	chr7	+	2647	9	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	213	junction_1	24.9446261747896	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437331	140443056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_172155_1882	chr7	+	1540	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	449	0	3	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	1882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140462329	140478555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
Isoform_172156_30	chr7	+	2025	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	-36	0	-36	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140461844	140478555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
Isoform_172162_147	chr7	+	2963	14	FSM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	10	8	10	0	multi-exon	FALSE	canonical	3	42	junction_1	11.3032434995212	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAGAGTGTGTGATG	NA	False	NA	7	True	ATTAAA	-19	NA	140521503	140527569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
Isoform_172163_6	chr7	+	2976	14	FSM	ENSMUSG00000062031.14	ENSMUST00000164580.3	3001	14	25	0	2	0	multi-exon	FALSE	canonical	0	0	junction_13	17.6205904299655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAGAGTGTGTGATG	NA	False	NA	7	True	ATTAAA	-19	NA	140521485	140527569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526706
Isoform_172164_14	chr7	+	3122	13	FSM	ENSMUSG00000062031.14	ENSMUST00000169736.8	3145	13	25	-2	10	2	multi-exon	FALSE	canonical	3	42	junction_1	11.7505910016854	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGTGATGGATT	NA	False	NA	11	True	ATTAAA	-23	NA	140521503	140527573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
Isoform_172165_3	chr7	+	2844	13	NIC	ENSMUSG00000062031.14	novel	2981	14	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	19.2806393969587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAGAGTGTGTGATG	NA	False	NA	7	True	ATTAAA	-19	NA	140521502	140527569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
Isoform_172166_5	chr7	+	2681	13	NIC	ENSMUSG00000062031.14	novel	2981	14	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.5930826795808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAGTCAGAGTGTGTGA	NA	False	NA	5	True	ATTAAA	-17	NA	140521502	140527567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140521557_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
Isoform_172171_340	chr7	+	656	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	81	-1	81	1	multi-exon	FALSE	canonical	3	1139	junction_1	0	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTAGTCCTGTGTTGAGTT	NA	False	NA	25	True	AATAAA	-29	NA	140548033	140549739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140548352_140549401
Isoform_172173_19	chr7	+	706	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	33	-3	33	3	multi-exon	FALSE	canonical	3	1139	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTCCTGTGTTGAGTTCG	NA	False	NA	27	True	AATAAA	-31	NA	140547985	140549741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140548352_140549401
Isoform_172174_84	chr7	+	2637	14	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-123	3484	-123	-1936	5prime_fragment	FALSE	canonical	3	174	junction_7	12.6579955787244	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGACTTCATCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	140640893	140648829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
Isoform_172179_317	chr7	+	3639	20	FSM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-84	1	-84	-1	multi-exon	FALSE	canonical	3	132	junction_14	21.3235203654468	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640932	140652312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
Isoform_172193_9	chr7	+	1304	6	ISM	ENSMUSG00000055629.6	ENSMUST00000209546.2	3076	16	5810	0	29	0	3prime_fragment	FALSE	canonical	3	186	junction_1	17.8706463229509	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140650216	140652313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
Isoform_172197_6	chr7	+	3006	14	FSM	ENSMUSG00000054065.13	ENSMUST00000106039.9	2919	14	-86	-1	-86	1	multi-exon	TRUE	canonical	0	0	junction_4	30.8055554814503	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCCGTGTGTTTCC	NA	False	NA	20	True	ATTAAA	-18	NA	140658044	140670424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140658348_140659818_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140667724_140668196_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
Isoform_172198_12	chr7	+	2853	13	FSM	ENSMUSG00000054065.13	ENSMUST00000066873.5	2848	13	-6	1	-6	-1	multi-exon	FALSE	canonical	0	0	junction_3	30.7431112428279	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCAGCTCCGTGTGTTT	NA	False	NA	18	True	ATTAAA	-16	NA	140659666	140670422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140667724_140668196_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
Isoform_172199_3	chr7	+	1408	7	NIC	ENSMUSG00000054065.13	novel	1425	7	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.5255862921022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCAGCTCCGTGTGTTT	616	False	NA	18	True	ATTAAA	-16	NA	140668060	140670422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140668298_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
Isoform_17220_72	chr11	-	5568	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-136	-7	1	7	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGTGTTAAAGCTATG	2067	False	NA	-25	True	AATAAA	-23	NA	104441445	104393563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
Isoform_172200_98	chr7	+	1418	7	FSM	ENSMUSG00000054065.13	ENSMUST00000160403.8	1425	7	11	-4	11	1	multi-exon	FALSE	canonical	3	51	junction_3	7.83156008298049	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCCGTGTGTTTCC	625	False	NA	20	True	ATTAAA	-18	NA	140668069	140670424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
Isoform_172205_885	chr7	+	2141	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	35	1448	20	556	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGCTGCCCTTTGCC	6845	False	NA	15	True	AATAAA	-20	NA	140711233	140736071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
Isoform_172206_18	chr7	+	3581	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	44	-1	-14	1	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAAAAGTTGGTTGT	6854	False	NA	NA	False	NA	NA	NA	140711242	140737520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
Isoform_172208_25	chr7	+	2010	12	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	20	552	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	88.9139243899021	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	6845	False	NA	11	True	AATAAA	-16	NA	140711233	140736067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734850_140734910_140735246
Isoform_172219_37	chr7	+	2549	13	FSM	ENSMUSG00000038637.16	ENSMUST00000070458.11	2502	13	-46	-1	-27	1	multi-exon	FALSE	canonical	3	14	junction_2	5.23609269080167	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGCCTGGCCTGGCTG	370	False	NA	11	True	AATAAA	-15	NA	140774042	140789963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140774531_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
Isoform_172220_10	chr7	+	2215	13	FSM	ENSMUSG00000038637.16	ENSMUST00000047093.11	2197	13	-10	-8	-10	0	multi-exon	FALSE	canonical	1	3	junction_1	6.88597608670453	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCCTGGCTGACCTA	1308	False	NA	16	True	AATAAA	-20	NA	140774980	140789968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140775130_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
Isoform_172221_8	chr7	+	2248	13	NNC	ENSMUSG00000038637.16	novel	2197	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.90920701180312	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCCTGGCTGACCTA	1309	False	NA	16	True	AATAAA	-20	NA	140774981	140789968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_140775130_140775820_140775926_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
Isoform_172222_11	chr7	+	1857	3	ISM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	14	0	-1	0	intron_retention	FALSE	canonical	3	288	junction_1	28.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795786	140798571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_140795854_140796633_140796765_140796912
Isoform_172224_566	chr7	+	1475	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	50	0	11	0	multi-exon	FALSE	canonical	3	288	junction_1	23.1395764870492	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795822	140798571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
Isoform_172226_22	chr7	+	1589	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	-26	-3	-7	0	multi-exon	FALSE	canonical	3	288	junction_1	22.576259654779	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795780	140798571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
Isoform_172227_16	chr7	+	1480	6	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_2	127.53258407168	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795788	140798571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140795854_140796633_140796765_140796941_140797626_140797798_140797931_140798002_140798082_140798182
Isoform_172232_21	chr7	+	1513	6	NIC	ENSMUSG00000038618.13	novel	661	3	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	122.763186664407	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140796103	140798571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140796173_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
Isoform_172233_12	chr7	+	2244	5	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	22	0	intron_retention	FALSE	canonical	3	329	junction_4	8.98262211161084	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795833	140798571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
Isoform_172240_39	chr7	+	5426	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	49.6786907872893	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTCTATGGACTGATG	NA	False	NA	79	True	NA	NA	NA	140808687	140842658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
Isoform_172241_13	chr7	+	5350	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	62.9845919533453	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808687	140842657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841200_140841456_140841688_140841818_140842321
Isoform_172242_233	chr7	+	5381	18	FSM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	-14	-119	-9	-2	multi-exon	FALSE	canonical	3	178	junction_2	28.6346754247049	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTCTATGGACTGATG	NA	False	NA	79	True	NA	NA	NA	140808687	140842658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
Isoform_172243_58	chr7	+	5312	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_15	49.6653158513657	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140808687	140842664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
Isoform_172246_5	chr7	+	5156	17	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	62.193215817724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808687	140842663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140841200_140841456_140841688_140841818_140842321
Isoform_172248_10	chr7	+	5421	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	63.3399134565102	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTTTCTATGGACTGA	NA	False	NA	77	True	NA	NA	NA	140808687	140842656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
Isoform_172249_5	chr7	+	5354	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	73.2876023919453	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140808687	140842664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841200_140841456_140841688_140841818_140842321
Isoform_172250_60	chr7	+	5384	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	49.8347442062644	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140808687	140842664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
Isoform_172252_10	chr7	+	5307	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	63.1683640324243	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808688	140842663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
Isoform_172257_296	chr7	+	3075	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	115	1	8	-1	multi-exon	FALSE	canonical	3	69	junction_6	10.2434125173206	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918907	140942932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_172258_51	chr7	+	3129	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	61	1	-15	-1	multi-exon	FALSE	canonical	3	69	junction_6	10.2434125173206	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918853	140942932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_172259_11	chr7	+	3196	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	-6	1	-6	-1	multi-exon	TRUE	canonical	3	69	junction_6	10.2434125173206	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918786	140942932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_17226_32	chr11	-	5776	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-136	-215	1	215	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCCAATGGTAATTT	2067	False	NA	NA	False	AATAAA	-11	NA	104441445	104393355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
Isoform_172263_28	chr7	+	3316	20	FSM	ENSMUSG00000025504.15	ENSMUST00000140025.8	3341	20	24	1	0	-1	multi-exon	FALSE	canonical	3	69	junction_6	10.3329610036278	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918892	140942932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_172270_4510	chr7	+	1250	8	FSM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	3267	junction_3	222.11993450864	4510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	3819	False	NA	18	True	ATTAAA	-17	NA	140972090	140982881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
Isoform_172284_5550	chr7	+	448	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	281	235	-18	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	5550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2398	False	NA	27	True	AATAAA	-20	NA	141027563	141031263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
Isoform_172285_162	chr7	+	493	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	236	235	-25	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2353	False	NA	27	True	AATAAA	-20	NA	141027518	141031263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
Isoform_17229_20	chr11	-	5442	19	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	52	junction_18	50.2831488843767	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGTTTATAATCAAGGT	2066	False	NA	-37	True	AATAAA	-11	NA	104441446	104393575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
Isoform_172296_161	chr7	+	1976	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	9	640	0	0	multi-exon	FALSE	canonical	3	56	junction_3	8.3132048573339	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATGTTACCCTTGC	9954	False	NA	28	True	AATAAA	-29	NA	141035119	141040016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
Isoform_172297_128	chr7	+	1992	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	-23	656	-23	-5	multi-exon	FALSE	canonical	3	56	junction_3	8.3132048573339	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGCCTTCCTCACTTC	9922	False	NA	12	True	AATAAA	-13	NA	141035087	141040000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
Isoform_172298_11	chr7	+	1623	10	NIC	ENSMUSG00000048200.13	novel	1158	8	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	4.21929723245501	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCTTGGCTCTTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	141041823	141046524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_141041847_141043296_141043486_141043562_141043675_141044043_141044207_141044608_141044756_141044851_141044943_141045176_141045270_141045431_141045599_141045678_141045751_141045958
Isoform_172299_3	chr7	+	1761	10	NIC	ENSMUSG00000048200.13	novel	1158	8	NA	NA	-120	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	4.21929723245501	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTCTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	141041687	141046526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_141041847_141043296_141043486_141043562_141043675_141044043_141044207_141044608_141044756_141044851_141044943_141045176_141045270_141045431_141045599_141045678_141045751_141045958
Isoform_1723_14	chr10	-	818	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	26	2	26	2	multi-exon	FALSE	canonical	3	143	junction_1	12	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTGGTGGCTGTGTT	NA	False	NA	-6	True	AATAAA	-20	NA	17899010	17887009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_17887565_17894586_17894654_17898814
Isoform_17230_11	chr11	-	5660	19	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	214	combination_of_known_junctions	FALSE	canonical	3	52	junction_18	50.2831488843767	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCAATGGTAATT	2067	False	NA	NA	False	AATAAA	-10	NA	104441445	104393356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
Isoform_172300_3	chr7	+	1859	9	NIC	ENSMUSG00000048200.13	novel	1158	8	NA	NA	16	0	intron_retention	FALSE	canonical	1	2	junction_1	4.28478412525065	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTCTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	141041823	141046526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_141041847_141043296_141043486_141043562_141043675_141044043_141044207_141044608_141044756_141044851_141045270_141045431_141045599_141045678_141045751_141045958
Isoform_172301_4	chr7	+	1059	4	ISM	ENSMUSG00000048200.13	ENSMUST00000053670.12	1698	10	4011	0	11	0	3prime_fragment	FALSE	canonical	3	11	junction_3	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTCTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	141045017	141046526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_141045270_141045431_141045599_141045678_141045751_141045958
Isoform_172303_279	chr7	+	1738	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	-13	-17	-13	7	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTTGCTGACAGGACC	NA	False	NA	15	True	NA	NA	NA	141047321	141051393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
Isoform_172305_217	chr7	+	1893	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	-22	-6	-21	6	multi-exon	FALSE	canonical	3	98	junction_1	68.1968938187848	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCTTGCTGACAGGAC	NA	False	NA	14	True	NA	NA	NA	141047283	141051392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
Isoform_172308_47	chr7	+	1645	7	FSM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	-18	-8	-18	7	multi-exon	FALSE	canonical	3	37	junction_1	95.130465969402	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTTGCTGACAGGACC	692	False	NA	15	True	NA	NA	NA	141048716	141051393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141048810_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
Isoform_172312_47	chr7	+	1418	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	47	1	47	-1	multi-exon	FALSE	canonical	3	56	junction_1	68.6787850082111	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGAAGTTCTTTCATT	3538	False	NA	44	True	NA	NA	NA	141055199	141073339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
Isoform_172313_26	chr7	+	1452	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	12	2	12	-2	multi-exon	FALSE	canonical	3	56	junction_1	68.6787850082111	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAAGTTCTTTCAT	3503	False	NA	43	True	NA	NA	NA	141055164	141073338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
Isoform_172317_356	chr7	+	1656	7	FSM	ENSMUSG00000025511.16	ENSMUST00000239217.2	1157	7	-26	-473	-26	-1	multi-exon	FALSE	canonical	3	206	junction_2	25.1241362482817	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGAAGTTCTTTCATT	628	False	NA	44	True	NA	NA	NA	141061950	141073339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
Isoform_17232_10	chr11	-	5580	19	FSM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	-228	-2192	0	0	multi-exon	FALSE	canonical	3	32	junction_11	53.6541278197565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2066	False	NA	-32	True	AATAAA	-16	NA	104441446	104393570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
Isoform_172325_531	chr7	+	4569	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	76	1	41	-1	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTGGTTTTTGTG	9672	False	NA	27	True	AATAAA	-21	NA	141142161	141212923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
Isoform_172330_53	chr7	+	4610	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	28	8	-7	-8	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAACATGTGTGTGGT	9624	False	NA	20	True	AATAAA	-14	NA	141142113	141212916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
Isoform_172336_291	chr7	+	4590	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	207	junction_7	117.945873284924	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTGGTTTTTGTG	9654	False	NA	27	True	AATAAA	-21	NA	141142143	141212923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
Isoform_172349_333	chr7	+	541	5	FSM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	147	4	-2	-4	multi-exon	FALSE	canonical	3	973	junction_1	229.96847610053	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTGGTGGACACTTTG	NA	False	NA	-2	True	AATAAA	-16	NA	142086895	142094480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094255
Isoform_17235_63	chr11	-	5565	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	7	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_8	36.3123027820232	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGTGTTAAAGCTATG	2067	False	NA	-25	True	AATAAA	-23	NA	104441445	104393563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
Isoform_172351_5	chr7	+	1559	9	FSM	ENSMUSG00000000244.18	ENSMUST00000009396.13	1582	9	21	2	7	1	multi-exon	FALSE	canonical	1	4	junction_1	3.07205143186113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGGTAGAATCCTTTC	3190	False	NA	NA	False	NA	NA	NA	142558803	142573221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142558913_142559640_142559756_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142570937_142571022_142571315_142571411_142572427
Isoform_172352_3	chr7	+	1472	8	NIC	ENSMUSG00000000244.18	novel	1582	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	3.39867921524866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGGTAGAATCCTTT	3192	False	NA	NA	False	NA	NA	NA	142558805	142573220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_142558913_142559640_142559756_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142571315_142571411_142572427
Isoform_172354_6896	chr7	+	1478	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	50	5	-5	-5	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	6896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGACTGCCAGACCTCTT	NA	False	NA	37	True	AATAAA	-25	NA	142606525	142621666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
Isoform_172357_124	chr7	+	1517	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	12	4	12	-4	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTGCCAGACCTCTTC	NA	False	NA	38	True	AATAAA	-26	NA	142606487	142621667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
Isoform_17238_29	chr11	-	5773	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	215	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_8	36.3123027820232	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCCAATGGTAATTT	2067	False	NA	NA	False	AATAAA	-11	NA	104441445	104393355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
Isoform_172385_19	chr7	+	1410	2	ISM	ENSMUSG00000045752.14	ENSMUST00000105920.8	895	4	69	0	13	0	intron_retention	FALSE	canonical	3	160	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623173	142624824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_142623251_142623491
Isoform_172386_5	chr7	+	1580	2	ISM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	17	7	17	-1	intron_retention	FALSE	canonical	3	160	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAATTGTGTGGCTTTT	NA	False	NA	15	True	AATAAA	-14	NA	142623002	142624823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_142623251_142623491
Isoform_172388_14	chr7	+	1465	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	-99	-2	20	2	multi-exon	FALSE	canonical	3	124	junction_2	18	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGGCTTTTTCC	NA	False	NA	18	True	AATAAA	-17	NA	142623005	142624826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623251_142623491_142623558_142623672
Isoform_172389_57	chr7	+	1303	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	66	-5	10	-1	multi-exon	FALSE	canonical	3	124	junction_2	18	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGGCTTTTTCCGGG	NA	False	NA	21	True	AATAAA	-20	NA	142623170	142624829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623251_142623491_142623558_142623672
Isoform_172390_5	chr7	+	1595	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	-229	-2	-110	2	multi-exon	FALSE	canonical	3	124	junction_2	18	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGGCTTTTTCC	NA	False	NA	18	True	AATAAA	-17	NA	142622875	142624826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623251_142623491_142623558_142623672
Isoform_172392_6	chr7	+	801	4	NIC	ENSMUSG00000045752.14	novel	895	4	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	63.0202789231812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGGCTTTTTCC	NA	False	NA	18	True	AATAAA	-17	NA	142623170	142624826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_142623251_142623491_142623558_142623672_142624030_142624528
Isoform_172394_101	chr7	+	1333	3	FSM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	185	1	10	-1	multi-exon	FALSE	canonical	3	158	junction_2	1	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGGCTTTTTCCGGG	NA	False	NA	21	True	AATAAA	-20	NA	142623170	142624829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623251_142623491_142623588_142623672
Isoform_172395_20	chr7	+	1498	3	FSM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	20	1	20	-1	multi-exon	FALSE	canonical	3	158	junction_2	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGGCTTTTTCCGGG	NA	False	NA	21	True	AATAAA	-20	NA	142623005	142624829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623251_142623491_142623588_142623672
Isoform_172398_7	chr7	+	827	4	FSM	ENSMUSG00000045752.14	ENSMUST00000105920.8	895	4	69	-1	13	1	multi-exon	FALSE	canonical	3	12	junction_3	69.3012746395524	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTGTGGCTTTTTC	NA	False	NA	17	True	AATAAA	-16	NA	142623173	142624825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623251_142623491_142623588_142623672_142624030_142624528
Isoform_172399_16	chr7	+	1454	2	FSM	ENSMUSG00000045752.14	ENSMUST00000133410.3	1091	2	183	-546	-20	-1	multi-exon	FALSE	canonical	3	124	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGGCTTTTTCCGGG	NA	False	NA	21	True	AATAAA	-20	NA	142623260	142624829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623558_142623672
Isoform_1724_57	chr10	-	1169	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	21	0	3	0	multi-exon	FALSE	canonical	3	48	junction_2	8.9977775033616	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTCTGTTTAGAA	NA	False	NA	0	True	AATAAA	-21	NA	18110723	18089423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
Isoform_172400_13	chr7	+	1539	2	FSM	ENSMUSG00000045752.14	ENSMUST00000137856.2	981	2	-74	-484	46	0	multi-exon	FALSE	canonical	3	158	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142623206	142624830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623588_142623672
Isoform_172402_13	chr7	+	1493	11	FSM	ENSMUSG00000000154.17	ENSMUST00000052348.12	1525	11	29	3	-3	-3	multi-exon	FALSE	canonical	2	3	junction_2	2.44131112314674	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTGGGCTTTGCC	885	False	NA	NA	False	AATAAA	-22	NA	143027501	143053068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_143027575_143029806_143030043_143033021_143033120_143033456_143033618_143034126_143034260_143044548_143044662_143045482_143045591_143046578_143046680_143050687_143050790_143051046_143051168_143052821
Isoform_172403_43	chr7	+	2535	9	NIC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	171.596137412822	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143383950	143402146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_143384003_143387504_143387674_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
Isoform_172405_203	chr7	+	2392	8	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	558	5	-50	-4	3prime_fragment	TRUE	canonical	3	394	junction_5	16.39686381163	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTATGTTGTACTGT	NA	False	NA	27	True	NA	NA	NA	143383920	143402142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
Isoform_172406_1240	chr7	+	2362	8	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	588	5	-20	-4	3prime_fragment	FALSE	canonical	3	394	junction_5	16.39686381163	1240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTATGTTGTACTGT	NA	False	NA	27	True	NA	NA	NA	143383950	143402142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
Isoform_172413_27	chr7	+	2416	8	NIC	ENSMUSG00000058454.16	novel	721	4	NA	NA	36	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	147.002151865411	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTATGTTGTACTGT	NA	False	NA	27	True	NA	NA	NA	143384030	143402142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_143384137_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
Isoform_17242_10	chr11	-	5408	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_18	50.3843560376962	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGTTTATAATCAAGGT	2097	False	NA	-37	True	AATAAA	-11	NA	104441415	104393575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
Isoform_172423_5	chr7	+	1449	4	FSM	ENSMUSG00000031074.15	ENSMUST00000155320.8	599	4	-225	-625	-225	625	multi-exon	FALSE	canonical	3	7	junction_1	23.9768406778059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTGGGATACAGACTT	NA	False	NA	9	True	ATTAAA	-24	NA	144391594	144397081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_144391847_144392341_144392665_144394407_144394512_144396311
Isoform_172424_29	chr7	+	2661	3	FSM	ENSMUSG00000031074.15	ENSMUST00000105898.2	2299	3	-354	-8	158	8	multi-exon	FALSE	canonical	3	54	junction_2	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGTTGGTGATGTTTTG	NA	False	NA	11	True	NA	NA	NA	144391977	144398181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_144392665_144394407_144394512_144396311
Isoform_172429_82	chr7	+	3460	2	ISM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	0	-1	0	1	intron_retention	FALSE	canonical	3	722	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTGTGTCTGCTTTGT	8002	False	NA	29	True	ATTAAA	-19	NA	144415122	144418981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_144415570_144415968
Isoform_17243_4	chr11	-	5683	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-18	221	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_18	50.3843560376962	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2048	False	NA	NA	False	AATAAA	-17	NA	104441464	104393349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
Isoform_172430_4109	chr7	+	3031	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	0	-1	0	1	multi-exon	FALSE	canonical	3	677	junction_2	22.5	4109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTGTGTCTGCTTTGT	8002	False	NA	29	True	ATTAAA	-19	NA	144415122	144418981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_144415570_144415968_144416073_144416501
Isoform_172449_15	chr7	+	1894	3	FSM	ENSMUSG00000031073.7	ENSMUST00000033389.7	1810	3	-87	3	-87	-3	multi-exon	FALSE	canonical	2	3	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTATTTGTTCTATTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	144450180	144454687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_144450669_144450852_144450957_144453385
Isoform_17245_8	chr11	-	5582	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	53.7478394627503	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGGTGTTAAAGCTAT	2067	False	NA	-26	True	AATAAA	-22	NA	104441445	104393564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
Isoform_172451_5	chr7	+	2254	4	ISM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	24	5	-12	-5	intron_retention	FALSE	canonical	3	87	junction_3	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTAGTCTGTCTGGGA	NA	False	NA	3	True	AATAAA	-13	NA	144468895	144474866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960
Isoform_172452_130	chr7	+	2003	5	FSM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	13	-1	13	1	multi-exon	FALSE	canonical	3	87	junction_3	3.69966214673719	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTGTCTGGGATCATTT	NA	False	NA	9	True	AATAAA	-19	NA	144468884	144474872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960_144473079_144473346
Isoform_172456_95	chr7	+	2796	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-83	2	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	427.5	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGACTCATGCTTTCTTT	2707	False	NA	16	True	AATATA	-10	NA	3341535	3347867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_3341614_3341727_3341816_3345237
Isoform_172458_77	chr7	+	2602	4	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-52	-104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	427.750965970726	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTTTAATTTTCTGG	2738	False	NA	17	True	NA	NA	NA	3341566	3347734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_3341614_3341727_3341816_3345237_3346670_3346699
Isoform_172459_17	chr7	+	2773	4	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-94	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	427.750965970726	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGAAGACTCATGCTTT	2696	False	NA	12	True	AATATA	-6	NA	3341524	3347863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_3341614_3341727_3341816_3345237_3346670_3346699
Isoform_172462_18	chr7	+	1021	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-261	-774	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	15.8694675399019	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTACTGTGCCTCTCTCAC	NA	False	NA	14	True	AATAAA	-27	NA	43362561	43376184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
Isoform_172464_3	chr7	+	880	7	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-266	-782	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.966746126228	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTCCCCTACTGTGCC	NA	False	NA	6	True	AATAAA	-19	NA	43362556	43376176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_43362566_43362603_43362686_43363215_43363307_43370390_43370581_43370791_43370961_43373178_43373316_43375974
Isoform_172468_57	chr7	+	2481	2	NNC	ENSMUSG00000109511.2	novel	2708	2	NA	NA	718	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGACTTGCTGTGAGTA	468	False	NA	14	True	AATAAA	-14	NA	44468578	44480229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_44468741_44477910
Isoform_172469_18	chr7	+	3943	18	NNC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	5078	0	intron_retention	FALSE	canonical	2	11	junction_2	100.680315611132	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130203125	130366515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_130203462_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_172474_28	chr7	+	1488	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30729	-9	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	100.011249367259	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAAAAGACTGGTTATT	NA	False	NA	8	True	AATAAA	-15	NA	81889364	81956618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_172475_11	chr7	+	1520	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30768	-9	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	122.938437337555	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAAAAGACTGGTTATT	NA	False	NA	8	True	AATAAA	-15	NA	81889325	81956618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_172477_16	chr7	+	3487	13	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-505	-6	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	14.8847423745107	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGCTGGCTGTGACT	NA	False	NA	17	True	AATAAA	-17	NA	101916507	102086519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
Isoform_172478_5	chr7	+	3404	12	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-516	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	21.4830319358564	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGCTGGCTGTGAC	NA	False	NA	16	True	AATAAA	-16	NA	101916496	102086518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
Isoform_172482_4	chr7	+	3669	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	612	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	35.5652920696569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGCTGACTTTTTGTGT	2145	False	NA	13	True	TATAAA	-17	NA	127346558	127368653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_172483_9	chr7	+	3236	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	629	8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	32.3907394173088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCTTCCCATTCTT	2162	False	NA	12	True	NA	NA	NA	127346575	127368108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_172484_8	chr7	+	3779	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	625	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	32.3907394173088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCGGGGCCGCTGACTTT	2158	False	NA	7	True	TATAAA	-11	NA	127346571	127368647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_172485_6	chr7	+	3574	10	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	619	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	40.0971043565215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	2152	False	NA	15	True	TATAAA	-19	NA	127346565	127368655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_172486_22	chr7	+	3469	8	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-35	3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	106.478320108186	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACTATAGCGTGTAAG	NA	False	NA	30	True	NA	NA	NA	12568928	12584507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_12569208_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
Isoform_172488_8	chr7	+	1146	7	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	241.768311957268	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	8240	False	NA	19	True	AATAAA	-19	NA	101546037	101548745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_101546254_101546395_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_172490_14	chr7	+	990	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-45	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	208.612559545201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTATTCCCTGTTT	8227	False	NA	22	True	AATAAA	-22	NA	101546024	101548748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_101546254_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_172492_25	chr7	+	2083	12	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	2040	556	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	84.6823915463925	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGCTGCCCTTTGCC	NA	False	NA	15	True	AATAAA	-20	NA	140714505	140736071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_140714645_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
Isoform_172493_18	chr7	+	697	7	NNC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	712.609621196783	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	3977	False	NA	32	True	AATAAA	-24	NA	126811796	126813460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_126811894_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_172494_19	chr7	+	656	7	NNC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	712.609621196783	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4018	False	NA	32	True	AATAAA	-24	NA	126811837	126813460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_126811894_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_172499_16	chr7	+	790	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	204.430330430687	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATGTCTATTCCCTGTT	8193	False	NA	21	True	AATAAA	-21	NA	101545990	101548747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_101546021_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_1725_9	chr10	-	2230	7	NNC	ENSMUSG00000059554.13	novel	1190	6	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	27.7968823191858	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCGTCATCTCTGTTTT	NA	False	NA	-10	True	AATAAA	-11	NA	18110734	18089433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_18089927_18092007_18092031_18093080_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
Isoform_172502_9	chr7	+	3967	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	252	-5	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	67.0066331708204	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467891	130515037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_172506_3	chr7	+	7094	22	NNC	ENSMUSG00000038540.15	novel	3306	22	NA	NA	-17026	1236	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	2.86031569860594	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTCTTTATTTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	83217108	83276058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_83217217_83234273_83234389_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311
Isoform_172508_7	chr7	+	2039	8	NNC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	54.1268351717915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647075	44651814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_44647803_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
Isoform_172509_4	chr7	+	2131	7	NNC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	9	0	intron_retention	FALSE	canonical	2	10	junction_1	55.5980115551706	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647080	44651813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_44647803_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
Isoform_172511_20	chr7	+	2100	15	NNC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	26.4262547247148	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	26932632	26957370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_26932708_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
Isoform_172512_17	chr7	+	3286	5	NNC	ENSMUSG00000030600.16	novel	3060	2	NA	NA	-3584	-1	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_1	26.5706605111728	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	394	False	NA	27	True	ATTAAA	-31	NA	28147820	28167666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28147929_28153921_28153955_28157383_28157439_28158051_28159489_28166013
Isoform_172515_13	chr7	+	1357	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	489.143639435289	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2705	False	NA	2	True	AATAAA	-12	NA	3697293	3704007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_3697403_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_172520_8	chr7	+	3982	12	NNC	ENSMUSG00000011263.17	novel	4016	12	NA	NA	-59	1	intron_retention	TRUE	canonical	1	4	junction_6	3.17010832257504	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGATTCCCACTGCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	19197196	19230686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_19197279_19203392_19203930_19207852_19208448_19212233_19212346_19213712_19213815_19213904_19214006_19215170_19215282_19218523_19218660_19222976_19223100_19223532_19223689_19225580_19225703_19228881
Isoform_172522_11	chr7	+	4146	16	NNC	ENSMUSG00000030671.10	novel	719	4	NA	NA	-100	-1316	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	18.5021320092818	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAACTTGCGTTTATAT	NA	False	NA	7	True	AATAAA	-17	NA	114014415	114137170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_114014487_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
Isoform_172525_9	chr7	+	2731	6	NNC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	1288	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	38.6471214969498	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127837816	127844272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_127837947_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
Isoform_172527_7	chr7	+	1653	10	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	25.8246699929915	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTCTGTGCGTTTGG	1278	False	NA	16	True	AATAAA	-17	NA	45165225	45171805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_45165424_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
Isoform_172528_3	chr7	+	1667	10	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	26.1807581778189	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTCTGTGCGTTTGG	1285	False	NA	16	True	AATAAA	-17	NA	45165232	45171805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_45165424_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168331_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
Isoform_172529_4	chr7	+	1539	3	NNC	ENSMUSG00000055407.15	novel	3233	3	NA	NA	60042	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	98978380	98986343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_98978662_98979570_98979677_98985191
Isoform_17253_35	chr11	-	2808	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835026	105824527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
Isoform_172531_5	chr7	+	2470	5	NNC	ENSMUSG00000055102.16	novel	1824	4	NA	NA	957	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	33.3494752582406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATACCCACATTCATCCA	3849	False	NA	3	True	AATAAA	-17	NA	43257605	43267705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_43257768_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_172538_6	chr7	+	2808	13	NNC	ENSMUSG00000038637.16	novel	2502	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.27247474309048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCCTGGCTGACCTA	397	False	NA	16	True	AATAAA	-20	NA	140774069	140789968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_140774812_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
Isoform_172539_5	chr7	+	2239	3	NNC	ENSMUSG00000045165.7	novel	1932	2	NA	NA	-688	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAATCCTTTTTGTATG	NA	False	NA	-1	True	NA	NA	NA	126689842	126693151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_126690035_126690408_126690645_126691340
Isoform_17254_123	chr11	-	2764	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	-5	True	AATAAA	-14	NA	105834983	105824528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
Isoform_172542_6	chr7	+	1926	6	NNC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	20.3803827245712	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTCATATCTTTTTC	8825	False	NA	NA	False	AATAAA	-17	NA	28392253	28398761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28392357_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
Isoform_172543_3	chr7	+	5798	13	NNC	ENSMUSG00000030607.8	novel	2596	7	NA	NA	-10355	-222	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	4.27849921766448	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACATTGTGTGTGCCCCA	NA	False	NA	NA	False	ATTAAA	-14	NA	78739143	78764153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_78739351_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
Isoform_172544_3	chr7	+	1289	6	NNC	ENSMUSG00000070777.6	novel	2888	12	NA	NA	-1828	-15618	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.489897948556636	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAAAAAAAGAGAAGA	27	False	NA	NA	False	CATAAA	-11	NA	19697508	19708587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_19697733_19701666_19701754_19704089_19704369_19705428_19705711_19708096_19708192_19708265
Isoform_172545_11	chr7	+	1392	7	NNC	ENSMUSG00000033685.14	novel	464	4	NA	NA	469	323	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	172.435897912496	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100145754	100148832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_100145845_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
Isoform_172546_3	chr7	+	5680	12	NNC	ENSMUSG00000031028.15	novel	747	2	NA	NA	2755	-137	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.49078868019691	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAATGTATTTATTT	7227	False	NA	0	True	AATAAA	-14	NA	108619503	108633530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_108619638_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
Isoform_172548_4	chr7	+	1154	2	Intergenic	novelGene_10337	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAACTCTGCTTGGTA	NA	False	NA	NA	False	NA	NA	NA	123451892	123453209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_123451923_123452085
Isoform_172549_5	chr7	+	1826	4	NNC	ENSMUSG00000109969.2	novel	2277	4	NA	NA	-23	-426	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6.12825877028341	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGTTTTGTTTTGTTT	NA	False	NA	NA	False	AGTAAA	-45	NA	11343211	11347613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_11343294_11343947_11344419_11346256_11346417_11346500
Isoform_17255_16	chr11	-	2763	7	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-556	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	70.9475549653091	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	-5	True	AATAAA	-14	NA	105835869	105824528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105835823
Isoform_172552_11	chr7	+	1631	4	NNC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	100.839806954727	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	NA	False	NA	26	True	AATAAA	-19	NA	16044320	16052130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_16044384_16046050_16046340_16047551_16047743_16051042
Isoform_172553_5	chr7	+	3827	4	NNC	ENSMUSG00000037640.16	novel	5896	5	NA	NA	204	1226	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	74.6562492732896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTCTGGCTCCATTT	NA	False	NA	35	True	NA	NA	NA	27436584	27451112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_27436666_27437727_27437855_27440381_27440481_27447592
Isoform_172557_6	chr7	+	3415	6	NNC	ENSMUSG00000055102.16	novel	1824	4	NA	NA	955	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.8021738488367	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGCTTATTTTAAAT	3847	False	NA	3	True	AATAAA	-11	NA	43257603	43267636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_43258436_43258475_43258820_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_172558_5	chr7	+	3907	5	NNC	ENSMUSG00000037640.16	novel	2115	4	NA	NA	217	1225	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.443407279299	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTGTCTGGCTCCATT	NA	False	NA	34	True	NA	NA	NA	27436008	27451111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_27436118_27436360_27436414_27437727_27437855_27440381_27440481_27447592
Isoform_172559_5	chr7	+	1296	11	NNC	ENSMUSG00000030801.11	novel	660	2	NA	NA	314	-75	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	93.4796234481077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGAGGTACGCAGAGA	-24	True	NA	17	True	AGTAAA	-18	NA	127512001	127524934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_127512021_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
Isoform_17256_7	chr11	-	2867	7	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	71.2524853367703	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834968	105824527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831322_105834936
Isoform_172560_5	chr7	+	2990	3	NNC	ENSMUSG00000057706.8	novel	3355	2	NA	NA	-199	52	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACTGTTGTATGGTG	NA	False	NA	NA	False	AATAAA	-11	NA	82516341	82520775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_82516434_82517049_82517136_82517963
Isoform_172565_4	chr7	+	1994	15	NNC	ENSMUSG00000030492.17	novel	1940	13	NA	NA	-555	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.56347977784662	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTAATACTATTATTT	NA	False	NA	NA	False	AATGAA	-17	NA	35147665	35165428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_35147849_35148488_35148572_35148773_35148880_35149174_35149312_35151793_35151942_35152818_35153062_35153478_35153605_35153982_35154083_35155001_35155047_35155538_35155663_35156432_35156537_35159271_35159369_35160199_35160350_35163020_35163196_35165255
Isoform_172567_6	chr7	+	579	3	NNC	ENSMUSG00000007944.9	novel	2052	3	NA	NA	-6362	-1140	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	1.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTCCTTTGTGTGGTCT	NA	False	NA	9	True	NA	NA	NA	27346977	27355631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_27347078_27354336_27354520_27355335
Isoform_17257_89	chr11	-	2529	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	212	0	-61	0	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835026	105824527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
Isoform_172572_4	chr7	+	2124	15	NNC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	-1092	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	28.4519824638363	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTTCTCTCTGTGCTA	NA	False	NA	22	True	AATAAA	-22	NA	26931355	26957375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_26931450_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
Isoform_172573_5	chr7	+	5164	6	NNC	ENSMUSG00000108621.2	novel	208	2	NA	NA	296	4554	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	20.5075595817737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGGAGGTTCTGTTTT	NA	False	NA	18	True	AATAAA	-21	NA	39202244	39219188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_39202324_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
Isoform_172574_3	chr7	+	1840	6	NNC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	21.4811545313561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGTTCATATCTTTT	9130	False	NA	NA	False	AATAAA	-15	NA	28392558	28398759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28392578_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
Isoform_172578_4	chr7	+	528	2	Antisense	novelGene_ENSMUSG00000030518.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACAAGTCTCCATTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	64714692	64715871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_64714858_64715508
Isoform_172581_3	chr7	+	2296	2	Intergenic	novelGene_10097	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCGGTTGTCCTGAGT	973	False	NA	NA	False	NA	NA	NA	63607062	63610216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_63607225_63608082
Isoform_172588_8	chr7	+	168	1	Intergenic	novelGene_9749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAATAAAATAA	691	False	NA	NA	False	NA	NA	NA	3214571	3214739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3214600_3214700
Isoform_172589_15	chr7	+	176	1	Intergenic	novelGene_9894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAGATAAATAAATAA	526	False	NA	NA	False	NA	NA	NA	27195679	27195855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27195700_27195900
Isoform_17259_116	chr11	-	2466	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	274	1	1	-1	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	-5	True	AATAAA	-14	NA	105834964	105824528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
Isoform_172590_41	chr7	+	178	1	Antisense	novelGene_ENSMUSG00000087371.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATACT	5911	False	NA	NA	False	NA	NA	NA	27202898	27203076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_27202900_27203100
Isoform_172591_11	chr7	-	2300	1	NIC	ENSMUSG00000087371.2	novel	2713	4	NA	NA	6	-3099	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	27207541	27205241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_27205200_27207500
Isoform_172592_9	chr7	+	249	1	Intergenic	novelGene_9895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGCTCATAAGGACTAT	NA	False	NA	NA	False	NA	NA	NA	27208951	27209200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27209000_27209200
Isoform_172593_12	chr7	-	188	1	Intergenic	novelGene_9896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACATTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	27210855	27210667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27210700_27210900
Isoform_172594_3	chr7	-	173	1	Intergenic	novelGene_9897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	27213054	27212881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27212900_27213100
Isoform_172598_524	chr7	-	190	1	Intergenic	novelGene_9898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	524	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTTTTGTTTTTT	NA	False	NA	-2	True	NA	NA	NA	27286319	27286129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27286100_27286300
Isoform_17260_6	chr11	-	2777	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	-36	0	-19	0	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835274	105824527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
Isoform_172600_55	chr7	-	157	1	Intergenic	novelGene_9899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	9506	False	NA	NA	False	NA	NA	NA	27330194	27330037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27330000_27330200
Isoform_172601_11	chr7	-	177	1	Intergenic	novelGene_9900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCGGGCTGG	9314	False	NA	NA	False	NA	NA	NA	27330386	27330209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27330200_27330400
Isoform_172603_3	chr7	+	166	1	Intergenic	novelGene_9901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGGGGTGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	27347672	27347838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27347700_27347800
Isoform_172604_101	chr5	-	176	1	Intergenic	novelGene_8681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACACGG	NA	False	NA	NA	False	NA	NA	NA	102729893	102729717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_102729700_102729900
Isoform_172605_3	chr7	-	179	1	Intergenic	novelGene_9903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAACTTGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27380851	27380672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27380700_27380900
Isoform_172606_8	chr7	-	3445	1	Antisense	novelGene_ENSMUSG00000057093.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTCACAGGAGCACCT	NA	False	NA	NA	False	NA	NA	NA	27403348	27399903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_27399900_27403300
Isoform_172608_8	chr7	-	2215	1	Antisense	novelGene_ENSMUSG00000037640.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27449142	27446927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_27446900_27449100
Isoform_17261_6	chr11	-	2860	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	-123	4	-48	-4	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCGCTTGCCTTCTGTCT	NA	False	NA	-8	True	AATAAA	-11	NA	105835361	105824531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
Isoform_172615_4	chr7	-	2374	1	FSM	ENSMUSG00000108314.2	ENSMUST00000206136.2	1756	1	-243	-375	-243	375	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGATGGCCACCTTAC	NA	False	NA	NA	False	AATAAA	-39	NA	27584178	27581804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27581800_27584200
Isoform_17262_19	chr11	-	2484	6	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-555	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	67.416318499307	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835868	105824527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105835823
Isoform_172620_4	chr7	+	177	1	Intergenic	novelGene_9905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGCTCCTGATCTTGG	NA	False	NA	NA	False	NA	NA	NA	27824038	27824215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27824000_27824200
Isoform_172622_54	chr7	+	4288	1	FSM	ENSMUSG00000035632.17	ENSMUST00000206331.2	4333	1	26	19	4	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	2754	False	NA	19	True	NA	NA	NA	3648292	3652580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_3648300_3652600
Isoform_172624_16	chr7	+	175	1	Intergenic	novelGene_9906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATCACCAACAGAG	4970	False	NA	NA	False	NA	NA	NA	27865573	27865748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27865600_27865700
Isoform_172625_4	chr7	+	160	1	Intergenic	novelGene_9907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCCTTTTATTATATTA	NA	False	NA	NA	False	NA	NA	NA	27909204	27909364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27909200_27909400
Isoform_172628_123	chr7	+	1290	1	FSM	ENSMUSG00000046058.8	ENSMUST00000059596.8	1392	1	-9	111	-9	-111	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATACCAATTTTCTGGG	NA	False	NA	14	True	CATAAA	-34	NA	27967296	27968586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27967300_27968600
Isoform_172629_3	chr7	+	2519	1	FSM	ENSMUSG00000046058.8	ENSMUST00000059596.8	1392	1	-28	-1099	-28	1099	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGGTGAAGCCGGTGT	NA	False	NA	NA	False	NA	NA	NA	27967277	27969796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27967300_27969800
Isoform_172632_21	chr7	+	1734	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	19	-2	19	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGGGTTGTTTGAAAAT	NA	False	NA	NA	False	AATGAA	-17	NA	27977182	27978916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27977200_27978900
Isoform_172633_3	chr7	+	1313	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	-16	454	-16	-454	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAAATAGGTATCCATA	NA	False	NA	NA	False	NA	NA	NA	27977147	27978460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27977100_27978500
Isoform_172636_96	chr5	-	177	1	Intergenic	novelGene_8709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	106944994	106944817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_106944800_106945000
Isoform_172637_39	chr7	+	174	1	Intergenic	novelGene_9909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTATTTAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	27982449	27982623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27982400_27982600
Isoform_172638_18	chr5	+	177	1	Intergenic	novelGene_8733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGGCGATGGTATC	NA	False	NA	NA	False	NA	NA	NA	108388161	108388338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_108388200_108388300
Isoform_172639_113	chr7	+	176	1	Intergenic	novelGene_9911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATATTTTTATG	NA	False	NA	NA	False	NA	NA	NA	28027112	28027288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28027100_28027300
Isoform_17264_9	chr11	-	2538	6	FSM	ENSMUSG00000019590.17	ENSMUST00000184086.8	1130	6	-29	-1379	-29	-3	multi-exon	FALSE	canonical	3	6	junction_2	71.4898594207598	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGCTTGCCTTCTGTCTT	NA	False	NA	-7	True	AATAAA	-12	NA	105834994	105824530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_105826394_105826577_105826780_105827007_105827112_105827380_105827480_105828454_105828667_105834936
Isoform_172640_11	chr7	+	182	1	Intergenic	novelGene_9912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	28038758	28038940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28038800_28038900
Isoform_172644_10	chr7	-	305	1	Intergenic	novelGene_9913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTCTC	NA	False	NA	NA	False	NA	NA	NA	28074624	28074319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28074300_28074600
Isoform_172646_5	chr7	-	232	1	Intergenic	novelGene_9914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	28086984	28086752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28086800_28087000
Isoform_172647_18	chr7	-	177	1	Intergenic	novelGene_9915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	28097020	28096843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28096800_28097000
Isoform_172651_8	chr7	+	237	1	Intergenic	novelGene_9917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCGGGCGTGGTGGCGCA	7640	False	NA	NA	False	AAAAAG	-8	NA	28128168	28128405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28128200_28128400
Isoform_172653_56	chr7	-	174	1	Intergenic	novelGene_9918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28157286	28157112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28157100_28157300
Isoform_172654_15	chr9	+	166	1	Intergenic	novelGene_11083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATCTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8888211	8888377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_8888200_8888400
Isoform_172656_6	chr7	-	786	1	NIC	ENSMUSG00000078813.4	novel	2222	4	NA	NA	370	-4587	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCGG	9073	False	NA	NA	False	NA	NA	NA	3668469	3667683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3667700_3668500
Isoform_172657_4	chr7	-	967	1	NIC	ENSMUSG00000078813.4	novel	2222	4	NA	NA	187	-4589	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	8890	False	NA	NA	False	NA	NA	NA	3668652	3667685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_3667700_3668700
Isoform_172658_6	chr7	+	192	1	Intergenic	novelGene_9919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATATTTTTTTAAAAAAG	4599	False	NA	NA	False	NA	NA	NA	28192181	28192373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28192200_28192400
Isoform_17266_6	chr11	-	2606	6	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	75.5115885146114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834982	105824527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_105826394_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
Isoform_172660_4	chr7	+	3032	1	Antisense	novelGene_ENSMUSG00000030602.14_AS_novelGene_ENSMUSG00000098558.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTGTGGGACAGGTGGA	NA	False	NA	NA	False	NA	NA	NA	28258107	28261139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_28258100_28261100
Isoform_172664_5	chr7	-	181	1	Intergenic	novelGene_9920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAGAAAGAAAGAAAGAA	8484	False	NA	NA	False	NA	NA	NA	28308332	28308151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28308200_28308300
Isoform_172665_5	chr7	+	200	1	Intergenic	novelGene_9921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAATAAATTAATAAAA	1935	False	NA	NA	False	NA	NA	NA	28318338	28318538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28318300_28318500
Isoform_172666_13	chr7	+	173	1	Intergenic	novelGene_9922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATGTTACCTTTCT	6852	False	NA	NA	False	NA	NA	NA	28323255	28323428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28323300_28323400
Isoform_172667_22	chr7	+	258	1	Intergenic	novelGene_9923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATGAAACCAAGTCTCC	NA	False	NA	NA	False	ATTAAA	-24	NA	28346999	28347257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28347000_28347300
Isoform_172668_3	chr7	+	175	1	Intergenic	novelGene_9924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGATTTATTTTATT	3177	False	NA	NA	False	NA	NA	NA	28353928	28354103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28353900_28354100
Isoform_172674_6	chr7	+	182	1	Intergenic	novelGene_9925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28429510	28429692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28429500_28429700
Isoform_172678_28	chr7	-	159	1	Intergenic	novelGene_9926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAAGAGCACTGAC	NA	False	NA	NA	False	NA	NA	NA	28493216	28493057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28493100_28493200
Isoform_172679_3	chr7	-	3762	1	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	28518032	28514270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_28514300_28518000
Isoform_172683_14	chr7	-	177	1	Intergenic	novelGene_9774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAGAAAGAAATAGAAA	1575	False	NA	NA	False	NA	NA	NA	3691991	3691814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3691800_3692000
Isoform_172686_4	chr7	+	176	1	Intergenic	novelGene_9927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGGAAAGGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	28571395	28571571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28571400_28571600
Isoform_17269_9	chr11	-	1137	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	0	273	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	113.415993140297	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106050968	106048866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050241_106050876
Isoform_172692_21	chr7	+	172	1	Intergenic	novelGene_9928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	28679075	28679247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28679100_28679200
Isoform_172696_5	chr7	+	189	1	Intergenic	novelGene_9929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAATTTGTTAAATA	NA	False	NA	NA	False	NA	NA	NA	28728594	28728783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28728600_28728800
Isoform_172698_7	chr7	-	178	1	Intergenic	novelGene_9930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAGCCACACATG	9790	False	NA	NA	False	NA	NA	NA	28799280	28799102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28799100_28799300
Isoform_172699_28	chr7	+	174	1	Intergenic	novelGene_9931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACATTATTAAAAAA	121	False	NA	NA	False	NA	NA	NA	28832506	28832680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28832500_28832700
Isoform_1727_16	chr10	-	3239	6	NIC	ENSMUSG00000059554.13	novel	1190	6	NA	NA	34	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	20.4782811778723	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGTCATCTCTGTTTTC	NA	False	NA	-9	True	AATAAA	-12	NA	18110692	18089432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_18089927_18092007_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
Isoform_172706_43	chr7	+	200	1	Intergenic	novelGene_9932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	28894151	28894351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28894200_28894400
Isoform_172707_16	chr7	-	177	1	Intergenic	novelGene_9775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTCAACTCTACATG	8750	False	NA	NA	False	NA	NA	NA	3711632	3711455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3711500_3711600
Isoform_172708_175	chr7	-	175	1	Intergenic	novelGene_9933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCACGAGTA	NA	False	NA	NA	False	NA	NA	NA	28937110	28936935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28936900_28937100
Isoform_172709_3	chr7	-	1836	1	Intergenic	novelGene_9934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGCAGTGCTTGTGCACC	9889	False	NA	NA	False	NA	NA	NA	28951598	28949762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28949800_28951600
Isoform_17271_24	chr11	-	2959	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	-17	8	-17	-8	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCTGAACCAGCATGTC	NA	False	NA	NA	False	AATAAA	-19	NA	106050985	106047089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
Isoform_172711_112	chr7	-	177	1	Intergenic	novelGene_9935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28966329	28966152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28966200_28966300
Isoform_172712_41	chr7	-	204	1	Intergenic	novelGene_9936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTATGGCAACT	6786	False	NA	NA	False	NA	NA	NA	28975018	28974814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28974800_28975000
Isoform_172713_3	chr7	+	1606	1	Intergenic	novelGene_9937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATTTTATGTCTCAGG	3561	False	NA	NA	False	AATAAA	-28	NA	28976180	28977786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28976200_28977800
Isoform_172714_5	chr7	+	1272	2	NNC	ENSMUSG00000037166.6	novel	755	4	NA	NA	0	-2333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	4003	False	NA	NA	False	NA	NA	NA	28988732	28990034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_+_28989678_28989707
Isoform_172715_9	chr7	-	167	1	Intergenic	novelGene_9938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATTTAGCC	NA	False	NA	NA	False	NA	NA	NA	28994424	28994257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_28994300_28994400
Isoform_172717_207	chr7	-	181	1	Intergenic	novelGene_9939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29199392	29199211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29199200_29199400
Isoform_172718_25	chr7	-	177	1	Intergenic	novelGene_9940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAACTTAAAAAAAAA	7263	False	NA	NA	False	NA	NA	NA	29225310	29225133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29225100_29225300
Isoform_172719_19	chr7	+	179	1	Intergenic	novelGene_9941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	29225342	29225521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29225300_29225500
Isoform_17272_352	chr11	-	1175	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	-10	1785	-10	273	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106050978	106048866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
Isoform_172720_3	chr7	+	180	1	Intergenic	novelGene_9942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTAGAGGTAG	1346	False	NA	NA	False	NA	NA	NA	29247090	29247270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29247100_29247300
Isoform_172722_12	chr7	+	155	1	Intergenic	novelGene_9943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	29426990	29427145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29427000_29427100
Isoform_172724_28	chr7	-	184	1	Antisense	novelGene_ENSMUSG00000046185.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTGTTTAAAAAATTAAAAA	2637	False	NA	NA	False	NA	NA	NA	29478980	29478796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_29478800_29479000
Isoform_172726_6	chr7	-	177	1	Intergenic	novelGene_9944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGCACAAA	NA	False	NA	NA	False	NA	NA	NA	29525017	29524840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29524800_29525000
Isoform_172727_8	chr5	-	210	1	Intergenic	novelGene_8621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTAAATTATAGGCCCAC	9803	False	NA	NA	False	NA	NA	NA	92252992	92252782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92252800_92253000
Isoform_172728_66	chr4	-	168	1	Intergenic	novelGene_7510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGTAAATTCCT	NA	False	NA	NA	False	NA	NA	NA	41128132	41127964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_41128000_41128100
Isoform_172729_5	chr7	+	164	1	Intergenic	novelGene_9945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	29602309	29602473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29602300_29602500
Isoform_17273_56	chr11	-	1492	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	0	1458	0	600	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTTCGGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	106050968	106048539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
Isoform_172732_86	chr7	+	178	1	Intergenic	novelGene_9947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAATACAAAG	NA	False	NA	NA	False	NA	NA	NA	29644881	29645059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29644900_29645100
Isoform_172733_12	chr7	+	175	1	Intergenic	novelGene_9948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTCC	NA	False	NA	NA	False	NA	NA	NA	29647330	29647505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29647300_29647500
Isoform_172734_8	chr7	-	181	1	Intergenic	novelGene_9949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTTGAAAAAAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	29657058	29656877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29656900_29657100
Isoform_172737_17	chr7	+	156	1	Intergenic	novelGene_9950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	29660512	29660668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29660500_29660700
Isoform_172738_149	chr7	-	181	1	Intergenic	novelGene_9951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTGGTTT	NA	False	NA	-2	True	NA	NA	NA	29661387	29661206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29661200_29661400
Isoform_17274_7	chr11	-	1233	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	341	273	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	112.144995430024	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106051345	106048866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106051185
Isoform_172742_190	chr7	-	535	1	FSM	ENSMUSG00000083669.6	ENSMUST00000121822.2	348	1	-52	-135	-52	135	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAGAAAGCTGAGT	NA	False	NA	NA	False	AATAAA	-29	NA	29665042	29664507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_29664500_29665000
Isoform_172743_28	chr7	-	172	1	Intergenic	novelGene_9952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACCATACATGGCCC	NA	False	NA	-1	True	NA	NA	NA	29672349	29672177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29672200_29672300
Isoform_172744_166	chr17	-	176	1	Intergenic	novelGene_5079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57607398	57607222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_57607200_57607400
Isoform_172746_3	chr7	-	162	1	Intergenic	novelGene_9954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	29689310	29689148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29689100_29689300
Isoform_17276_4	chr11	-	2063	12	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	42	14	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	47.5345894069008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCCTTGTGTTCA	NA	False	NA	1	True	ATTAAA	-27	NA	106084320	106054141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
Isoform_17278_6	chr11	-	2102	12	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	-5	4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	48.4848106060458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCACCAGTGTTTC	NA	False	NA	-9	True	ATTAAA	-17	NA	106084393	106054151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077950_106078007_106084291
Isoform_17279_82	chr11	-	2000	11	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	41	8	combination_of_known_splicesites	FALSE	canonical	3	51	junction_9	25.5305699113827	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCACCAGTGTTTCCTTG	NA	False	NA	-5	True	ATTAAA	-21	NA	106084321	106054147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
Isoform_172794_12	chr7	-	159	1	Intergenic	novelGene_9955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	29746383	29746224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29746200_29746400
Isoform_172795_38	chr7	-	171	1	Intergenic	novelGene_9956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTAAAAAAAAAAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	29748361	29748190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29748200_29748400
Isoform_172796_38	chr7	+	241	1	Intergenic	novelGene_9957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAACATTACAT	NA	False	NA	NA	False	NA	NA	NA	29752205	29752446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29752200_29752400
Isoform_172797_16	chr7	+	174	1	Intergenic	novelGene_9958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAATATATATATA	NA	False	NA	NA	False	NA	NA	NA	29753656	29753830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29753700_29753800
Isoform_172798_66	chr1	+	176	1	Intergenic	novelGene_550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	164732312	164732488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_164732300_164732500
Isoform_172803_37	chr7	+	213	1	Intergenic	novelGene_9959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTCGAGACAGGGTT	NA	False	NA	NA	False	NA	NA	NA	29843805	29844018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29843800_29844000
Isoform_17281_146	chr11	-	2047	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	-5	-525	-5	7	multi-exon	FALSE	canonical	3	87	junction_9	16.6340013225922	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCACCAGTGTTTCCTT	NA	False	NA	-6	True	ATTAAA	-20	NA	106084393	106054148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
Isoform_172819_16	chr7	+	173	1	Intergenic	novelGene_9960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29889136	29889309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29889100_29889300
Isoform_17282_29	chr11	-	2075	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	-34	-524	-24	6	multi-exon	FALSE	canonical	3	87	junction_9	16.6340013225922	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCACCAGTGTTTCCT	NA	False	NA	-7	True	ATTAAA	-19	NA	106084422	106054149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
Isoform_172820_5	chr7	+	176	1	Intergenic	novelGene_9961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAATTTAAGATTT	NA	False	NA	NA	False	NA	NA	NA	29901575	29901751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29901600_29901800
Isoform_172822_275	chr7	+	180	1	Intergenic	novelGene_9962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATATTTTTCCCA	NA	False	NA	NA	False	NA	NA	NA	29906039	29906219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29906000_29906200
Isoform_172823_151	chr7	+	213	1	Intergenic	novelGene_9963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCTTTGTTCCCCTAA	NA	False	NA	NA	False	NA	NA	NA	29907609	29907822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29907600_29907800
Isoform_172828_138	chr7	+	177	1	Intergenic	novelGene_9964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29927988	29928165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29928000_29928200
Isoform_17283_7	chr11	-	2443	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	4	-930	4	412	multi-exon	TRUE	canonical	3	87	junction_9	16.6340013225922	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTATTTTATGTTTG	NA	False	NA	NA	False	TATAAA	-10	NA	106084384	106053743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
Isoform_172830_13	chr7	+	175	1	Intergenic	novelGene_9965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTATTGTTGTTTTG	224	False	NA	NA	False	NA	NA	NA	29944219	29944394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_29944200_29944400
Isoform_172831_75	chr7	+	174	1	Intergenic	novelGene_9777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGCAGCTAAAAAAA	NA	False	NA	4	True	NA	NA	NA	4164815	4164989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4164800_4165000
Isoform_172832_159	chr7	-	949	1	FSM	ENSMUSG00000074211.5	ENSMUST00000098586.5	2490	1	1533	8	1533	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACAATCTTGTTGATTC	NA	False	NA	-3	True	AATAAA	-28	NA	30021787	30020838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30020800_30021800
Isoform_172833_12	chr7	-	977	1	FSM	ENSMUSG00000074211.5	ENSMUST00000098586.5	2490	1	1508	5	1508	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTTGTTGATTCTTT	NA	False	NA	0	True	AATAAA	-31	NA	30021812	30020835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30020800_30021800
Isoform_172834_3	chr7	+	3309	1	NIC	ENSMUSG00000036931.16	novel	2014	12	NA	NA	4	-1218	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGACAAAGAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30121160	30124469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30121200_30124500
Isoform_172835_6	chr7	-	2146	1	Antisense	novelGene_ENSMUSG00000036931.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTATTATTGTGGCTAG	NA	False	NA	NA	False	NA	NA	NA	30126196	30124050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_30124000_30126200
Isoform_172836_22	chr15	+	198	1	Intergenic	novelGene_4031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTTCCTGGGGCTGA	NA	False	NA	NA	False	NA	NA	NA	80005071	80005269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_80005100_80005300
Isoform_17284_7	chr11	-	1921	10	NIC	ENSMUSG00000069631.15	novel	1517	11	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	39.0520387226462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGGCACCAGTGTTTCC	NA	False	NA	-8	True	ATTAAA	-18	NA	106084393	106054150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
Isoform_172840_16	chr7	-	246	1	FSM	ENSMUSG00000109509.2	ENSMUST00000208689.2	397	1	167	-16	167	16	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCTCTTGTAAAAAAAAA	9802	False	NA	-25	True	AATAAA	-16	NA	30184355	30184109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_30184100_30184400
Isoform_172843_3	chr7	-	167	1	Antisense	novelGene_ENSMUSG00000036892.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAATTAAAAAAAAAAA	5043	False	NA	NA	False	NA	NA	NA	30211886	30211719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_30211700_30211900
Isoform_172845_23	chr7	+	181	1	Antisense	novelGene_ENSMUSG00000036864.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGCATACAAATG	NA	False	NA	NA	False	NA	NA	NA	30250988	30251169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_30251000_30251200
Isoform_172846_6	chr7	+	2018	1	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262769	30264787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_30262800_30264800
Isoform_172848_93	chr7	-	151	1	Intergenic	novelGene_9750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	3234068	3233917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3233900_3234100
Isoform_17285_7	chr11	-	4060	2	FSM	ENSMUSG00000069631.15	ENSMUST00000106867.2	3386	2	17	-691	7	691	multi-exon	FALSE	canonical	3	125	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106084381	106074036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106078007_106084291
Isoform_172853_3	chr7	+	176	1	Intergenic	novelGene_9966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGAGCAAGCAGGGAC	4557	False	NA	NA	False	NA	NA	NA	30327119	30327295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_30327100_30327300
Isoform_172854_8	chr7	-	182	1	Intergenic	novelGene_9967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAAATGGATCAAGAGC	NA	False	NA	NA	False	NA	NA	NA	30377777	30377595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_30377600_30377800
Isoform_172856_5	chr7	-	174	1	Intergenic	novelGene_9968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGATGATGGTAT	NA	False	NA	NA	False	NA	NA	NA	30510963	30510789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_30510800_30511000
Isoform_172857_9	chr7	-	176	1	Intergenic	novelGene_9778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATAAAGGGAGAA	NA	False	NA	NA	False	NA	NA	NA	4212576	4212400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_4212400_4212600
Isoform_172858_4	chr7	+	562	1	Intergenic	novelGene_9969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	30528750	30529312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_30528800_30529300
Isoform_172860_4	chr7	-	169	1	Intergenic	novelGene_9970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAATCTCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	30568254	30568085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_30568100_30568300
Isoform_172864_17	chr7	-	152	1	Intergenic	novelGene_9971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	30889170	30889018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_30889000_30889200
Isoform_172866_3	chr7	+	189	1	Intergenic	novelGene_9972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	33812236	33812425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_33812200_33812400
Isoform_172872_692	chr4	+	201	1	Intergenic	novelGene_7894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	692	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCCTCTCCAATCAGTC	NA	False	NA	NA	False	NA	NA	NA	126877837	126878038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126877800_126878000
Isoform_172876_23	chr7	+	2895	1	Intergenic	novelGene_9779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAAAAAATGGT	NA	False	NA	NA	False	NA	NA	NA	4307298	4310193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4307300_4310200
Isoform_172881_219	chr7	-	176	1	Intergenic	novelGene_9973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33882538	33882362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_33882400_33882500
Isoform_172883_77	chr7	-	171	1	Intergenic	novelGene_9974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33885533	33885362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_33885400_33885500
Isoform_172887_5	chr7	+	325	1	FSM	ENSMUSG00000085105.3	ENSMUST00000205940.2	1112	1	924	-137	924	137	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	33934789	33935114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_33934800_33935100
Isoform_172890_5	chr7	-	175	1	Intergenic	novelGene_9975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33949073	33948898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_33948900_33949100
Isoform_172894_156	chr3	-	174	1	ISM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	67562	432	40646	-432	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAAATATTTGA	NA	False	NA	NA	False	NA	NA	NA	116534253	116534079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr3_-_116534100_116534300
Isoform_172895_90	chr7	-	182	1	Intergenic	novelGene_9977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTGATTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	34066778	34066596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_34066600_34066800
Isoform_172901_20	chr7	+	170	1	Intergenic	novelGene_9978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAAGCAGGA	NA	False	NA	NA	False	NA	NA	NA	34534812	34534982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_34534800_34535000
Isoform_172903_5	chr7	-	220	1	Intergenic	novelGene_9979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGAAACAGAGACTCA	NA	False	NA	NA	False	NA	NA	NA	34682830	34682610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_34682600_34682800
Isoform_172904_16	chr7	-	174	1	Intergenic	novelGene_9980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATCT	NA	False	NA	NA	False	NA	NA	NA	34705548	34705374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_34705400_34705500
Isoform_172905_3	chr7	+	3444	1	Antisense	novelGene_ENSMUSG00000056216.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCCCAAGA	1603	False	NA	NA	False	NA	NA	NA	34745551	34748995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_34745600_34749000
Isoform_172920_9	chr7	+	2632	1	FSM	ENSMUSG00000034957.11	ENSMUST00000042985.11	2626	1	-10	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTGGTGTCTTTTTA	NA	False	NA	NA	False	TATAAA	-11	NA	34818717	34821349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_34818700_34821300
Isoform_172923_54	chr7	-	186	1	Intergenic	novelGene_9981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGATGGAGGGAGG	116	False	NA	NA	False	NA	NA	NA	34952873	34952687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_34952700_34952900
Isoform_172924_41	chr7	+	176	1	Intergenic	novelGene_9982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATTATATTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	34968387	34968563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_34968400_34968600
Isoform_172925_7	chr10	+	176	1	Intergenic	novelGene_1132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7262	False	NA	NA	False	NA	NA	NA	93268760	93268936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_93268800_93268900
Isoform_172926_39	chr7	-	176	1	Intergenic	novelGene_9983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTCT	9677	False	NA	NA	False	NA	NA	NA	35046897	35046721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_35046700_35046900
Isoform_172927_14	chr7	-	175	1	Intergenic	novelGene_9984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	35075983	35075808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_35075800_35076000
Isoform_172929_53	chr7	-	173	1	Intergenic	novelGene_9985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGGAATGAAA	NA	False	NA	NA	False	NA	NA	NA	35098395	35098222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_35098200_35098400
Isoform_172930_8	chr7	+	193	1	Intergenic	novelGene_9986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTATAAGAACCTGTT	1429	False	NA	NA	False	NA	NA	NA	35121443	35121636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_35121400_35121600
Isoform_172931_14	chr7	+	3125	1	Antisense	novelGene_ENSMUSG00000034875.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCATTGAGTTTACTCAA	NA	False	NA	NA	False	ATTAAA	-12	NA	35250528	35253653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_35250500_35253700
Isoform_172932_11	chr7	-	160	1	Intergenic	novelGene_9780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATAAATAAAAAAA	7478	False	NA	NA	False	NA	NA	NA	4520677	4520517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_4520500_4520700
Isoform_172933_6	chr7	-	169	1	Intergenic	novelGene_9987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAACTG	5252	False	NA	NA	False	NA	NA	NA	35270301	35270132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_35270100_35270300
Isoform_172934_5	chr7	-	181	1	Intergenic	novelGene_9988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	35334617	35334436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_35334400_35334600
Isoform_172935_65	chr5	-	170	1	Intergenic	novelGene_8585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79313723	79313553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_79313600_79313700
Isoform_172936_3	chr7	+	172	1	Intergenic	novelGene_9989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	35409389	35409561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_35409400_35409600
Isoform_172938_6	chr7	-	159	1	Intergenic	novelGene_9991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAACAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	35418788	35418629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_35418600_35418800
Isoform_172944_5	chr7	-	978	1	FSM	ENSMUSG00000044452.11	ENSMUST00000206003.2	987	1	10	-1	-4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGAGGACCAG	NA	False	NA	NA	False	TTTAAA	-25	NA	35502418	35501440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_35501400_35502400
Isoform_172948_360	chrX	+	621	1	FSM	ENSMUSG00000082035.2	ENSMUST00000118924.2	621	1	1	-1	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	95528465	95529086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_95528500_95529100
Isoform_172949_9	chr7	+	182	1	Intergenic	novelGene_9992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATAGT	NA	False	NA	NA	False	NA	NA	NA	35972637	35972819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_35972600_35972800
Isoform_172950_36	chr7	+	177	1	Intergenic	novelGene_9993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	36290793	36290970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_36290800_36291000
Isoform_172951_26	chr2	-	177	1	Intergenic	novelGene_6163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6031	False	NA	NA	False	NA	NA	NA	34272287	34272110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_34272100_34272300
Isoform_17296_864	chr11	-	3232	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	12	1949	12	1422	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGCTGCTTTGA	NA	False	NA	-7	True	ATTAAA	-11	NA	106107158	106090182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
Isoform_172960_13	chr7	-	156	1	Intergenic	novelGene_9994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	37869250	37869094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_37869100_37869200
Isoform_172964_17	chr7	+	304	1	Intergenic	novelGene_9995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAAACACTTAGA	NA	False	NA	NA	False	NA	NA	NA	39090091	39090395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_39090100_39090400
Isoform_172966_3	chr7	-	1539	1	Antisense	novelGene_ENSMUSG00000068959.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAAATTGTAAATA	NA	False	NA	NA	False	AGTAAA	-10	NA	39167394	39165855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_39165900_39167400
Isoform_172967_20	chr7	-	174	1	Intergenic	novelGene_9996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACACTCCTG	NA	False	NA	NA	False	NA	NA	NA	39176852	39176678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_39176700_39176900
Isoform_172968_28	chr7	-	194	1	Intergenic	novelGene_9997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATTCAATTCC	NA	False	NA	NA	False	NA	NA	NA	39196157	39195963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_39196000_39196200
Isoform_172970_16	chr7	+	177	1	Intergenic	novelGene_9998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTCTTTGAATA	NA	False	NA	NA	False	NA	NA	NA	39248911	39249088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_39248900_39249100
Isoform_172972_16	chr7	-	181	1	Intergenic	novelGene_9999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAAAAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	39385431	39385250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_39385200_39385400
Isoform_172973_9	chr7	+	175	1	Intergenic	novelGene_9781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTATGCACACTCACC	NA	False	NA	NA	False	NA	NA	NA	4689650	4689825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4689600_4689800
Isoform_172974_3	chr7	+	171	1	Intergenic	novelGene_10000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCTAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	39614260	39614431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_39614300_39614400
Isoform_172976_3	chr7	-	3417	1	FSM	ENSMUSG00000056383.11	ENSMUST00000206430.2	1139	1	-65	-2213	20	2213	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41042783	41039366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_41039400_41042800
Isoform_172978_5	chr7	+	166	1	Intergenic	novelGene_10001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTTTAAAAAAACATTAAAA	NA	False	NA	NA	False	NA	NA	NA	41159615	41159781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_41159600_41159800
Isoform_17298_89	chr11	-	3318	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	17	1858	17	1513	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTAATCTTGAATAT	NA	False	NA	84	True	ATTAAA	-24	NA	106107153	106090091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
Isoform_172981_5	chr7	+	2513	1	Intergenic	novelGene_10002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAACCAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	41199212	41201725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_41199200_41201700
Isoform_172982_3	chr7	-	1250	2	Genic_Genomic	ENSMUSG00000090744.8	novel	1430	4	NA	NA	5	2576	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCAGGTACTAGAT	NA	False	NA	NA	False	NA	NA	NA	41210248	41208948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_-_41209278_41209327
Isoform_172983_7	chr7	+	178	1	Intergenic	novelGene_10003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAACCTA	NA	False	NA	NA	False	NA	NA	NA	41213254	41213432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_41213300_41213400
Isoform_172987_29	chr7	-	260	1	Intergenic	novelGene_10004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	41564511	41564251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_41564300_41564500
Isoform_172989_3	chr7	+	174	1	Intergenic	novelGene_10005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATAAAGAATGGCT	NA	False	NA	NA	False	NA	NA	NA	41697718	41697892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_41697700_41697900
Isoform_172991_102	chr19	-	172	1	Intergenic	novelGene_5853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	45376503	45376331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45376300_45376500
Isoform_172997_4	chr7	+	171	1	Intergenic	novelGene_10007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGGCCGGAGCGAGAG	NA	False	NA	NA	False	NA	NA	NA	42128648	42128819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_42128600_42128800
Isoform_172999_3	chr7	+	321	1	Intergenic	novelGene_10008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAGAATCTCAA	NA	False	NA	NA	False	NA	NA	NA	42133498	42133819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_42133500_42133800
Isoform_173001_32	chr7	+	171	1	Intergenic	novelGene_10009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	42141161	42141332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_42141200_42141300
Isoform_173003_63	chr7	-	172	1	Intergenic	novelGene_10010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	42154317	42154145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42154100_42154300
Isoform_173005_11	chr7	+	160	1	Intergenic	novelGene_10011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	42189670	42189830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_42189700_42189800
Isoform_173010_11	chr7	+	175	1	Intergenic	novelGene_9784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCCAACAACA	171	False	NA	NA	False	NA	NA	NA	4741149	4741324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4741100_4741300
Isoform_173011_3	chr7	+	2272	1	Intergenic	novelGene_10012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATAAAACTATCAAACA	NA	False	NA	NA	False	NA	NA	NA	42284493	42286765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_42284500_42286800
Isoform_173012_7	chr7	-	178	1	Intergenic	novelGene_10013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAACTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	42304906	42304728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42304700_42304900
Isoform_173013_7	chr7	-	242	1	Intergenic	novelGene_10014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATTAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42306701	42306459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42306500_42306700
Isoform_173015_7	chr7	+	188	1	Intergenic	novelGene_10015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGCGTTACACTAT	NA	False	NA	NA	False	NA	NA	NA	42309007	42309195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_42309000_42309200
Isoform_173017_3	chr7	-	425	1	Intergenic	novelGene_9785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGGGAGAGAAAGATGG	8720	False	NA	NA	False	NA	NA	NA	4744302	4743877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_4743900_4744300
Isoform_173018_9	chr7	+	3014	1	Antisense	novelGene_ENSMUSG00000069727.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTCCAGGCCCAGAAAC	NA	False	NA	NA	False	AATACA	-42	NA	42334754	42337768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_42334800_42337800
Isoform_173019_3	chr7	-	2134	1	Genic_Genomic	ENSMUSG00000091594.3	novel	NA	NA	NA	NA	774	2007	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	-47	True	NA	NA	NA	42355019	42352885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_-_42352900_42355000
Isoform_173021_23	chr7	+	179	1	Intergenic	novelGene_10016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAACTGTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	42393013	42393192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_42393000_42393200
Isoform_173022_15	chr7	-	1967	1	Intergenic	novelGene_10017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42452384	42450417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42450400_42452400
Isoform_173032_10	chr7	-	3185	1	Genic_Genomic	ENSMUSG00000092225.2	novel	NA	NA	NA	NA	-26	-47247	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	42516684	42513499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_-_42513500_42516700
Isoform_173036_3	chr7	+	175	1	Antisense	novelGene_ENSMUSG00000090751.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGTATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42552310	42552485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_42552300_42552500
Isoform_173038_7	chr7	+	1966	1	Intergenic	novelGene_10018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42658739	42660705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_42658700_42660700
Isoform_173039_8	chr7	+	179	1	NIC	ENSMUSG00000091528.10	novel	2598	7	NA	NA	4497	-24633	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	42672718	42672897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_42672700_42672900
Isoform_173040_4	chr7	-	213	1	Intergenic	novelGene_10019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGCTAATTTTTCAAA	3986	False	NA	NA	False	NA	NA	NA	42707502	42707289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42707300_42707500
Isoform_173041_6	chr7	-	258	1	Intergenic	novelGene_10020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CACACCCAAAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	42741250	42740992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42741000_42741200
Isoform_173050_3	chr7	-	200	1	Intergenic	novelGene_10021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATCCAGTGCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	42753214	42753014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42753000_42753200
Isoform_173053_73	chr7	-	1231	1	NIC	ENSMUSG00000051811.15	novel	585	3	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_4754800_4756000
Isoform_173056_24	chr7	-	1732	1	Intergenic	novelGene_10022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	42829974	42828242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42828200_42830000
Isoform_173057_28	chr7	+	167	1	Intergenic	novelGene_9786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTTTTTTTCAA	5836	False	NA	NA	False	NA	NA	NA	4776873	4777040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4776900_4777000
Isoform_173058_10	chr7	-	6433	2	Antisense	novelGene_ENSMUSG00000074887.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42871704	42865242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_42871150_42871178
Isoform_173060_34	chr7	-	515	1	Antisense	novelGene_ENSMUSG00000074887.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42871704	42871189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_42871200_42871700
Isoform_173061_5	chr7	-	178	1	Intergenic	novelGene_10023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAACAACAGTA	NA	False	NA	NA	False	NA	NA	NA	42919702	42919524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42919500_42919700
Isoform_173062_57	chr7	-	173	1	Intergenic	novelGene_10024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATTTTTGAGACAA	NA	False	NA	-1	True	NA	NA	NA	42933763	42933590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42933600_42933800
Isoform_173064_157	chr11	+	187	1	Antisense	novelGene_ENSMUSG00000085307.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAATAAA	5053	False	NA	NA	False	NA	NA	NA	96812850	96813037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_96812800_96813000
Isoform_173065_21	chr7	-	185	1	Intergenic	novelGene_10025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAAAGAAGGAATGAGAT	NA	False	NA	NA	False	NA	NA	NA	42992364	42992179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_42992200_42992400
Isoform_173067_24	chr7	-	2079	1	Antisense	novelGene_ENSMUSG00000030472.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	43296521	43294442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_43294400_43296500
Isoform_173068_108	chr7	-	178	1	Intergenic	novelGene_10026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTAAATCTGTG	1068	False	NA	NA	False	NA	NA	NA	43312191	43312013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_43312000_43312200
Isoform_17307_42	chr11	-	3144	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-463	1421	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	175.732336713158	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTGCTTTG	NA	False	NA	-8	True	ATTAAA	-10	NA	106107633	106090183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
Isoform_173070_4	chr7	+	186	1	Intergenic	novelGene_10027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAAGAACTGTCCTAG	4908	False	NA	NA	False	TTTAAA	-9	NA	43572522	43572708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_43572500_43572700
Isoform_173081_101	chr10	+	177	1	Intergenic	novelGene_1053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAACA	NA	False	NA	NA	False	NA	NA	NA	80533067	80533244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80533100_80533200
Isoform_173082_7	chr7	-	627	1	ISM	ENSMUSG00000004473.11	ENSMUST00000004587.11	2978	4	2022	1567	2022	-1567	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGAAGTTGTCCTAGT	NA	False	NA	NA	False	CATAAA	-14	NA	43954304	43953677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_43953700_43954300
Isoform_173083_18	chr7	-	172	1	Antisense	novelGene_ENSMUSG00000038738.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8546	False	NA	NA	False	NA	NA	NA	44007571	44007399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_44007400_44007600
Isoform_173084_6	chr7	-	384	1	Antisense	novelGene_ENSMUSG00000038738.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8334	False	NA	NA	False	NA	NA	NA	44007783	44007399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_44007400_44007800
Isoform_173087_8	chr7	+	2822	1	Intergenic	novelGene_10029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCACTCCTCAATAGC	2690	False	NA	NA	False	NA	NA	NA	44018983	44021805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_44019000_44021800
Isoform_173089_33	chr7	-	176	1	Intergenic	novelGene_10030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	44026107	44025931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_44025900_44026100
Isoform_173090_7	chr7	+	178	1	Intergenic	novelGene_10031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTGGCCATAGCAAC	5342	False	NA	NA	False	NA	NA	NA	44026149	44026327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_44026100_44026300
Isoform_173092_12	chr7	-	177	1	Intergenic	novelGene_10032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGTAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	44074102	44073925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_44073900_44074100
Isoform_173093_8	chr7	+	171	1	Intergenic	novelGene_9787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTAGGGCTGGTGAG	NA	False	NA	NA	False	NA	NA	NA	4803294	4803465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4803300_4803500
Isoform_173094_77	chr7	+	1874	1	Intergenic	novelGene_10033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	44137278	44139152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_44137300_44139200
Isoform_173098_15	chr7	-	179	1	Intergenic	novelGene_10034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTTTACTGTTGA	NA	False	NA	NA	False	NA	NA	NA	44216787	44216608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_44216600_44216800
Isoform_173099_132	chr7	+	176	1	Intergenic	novelGene_10035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAAAAGTCTCT	385	False	NA	NA	False	NA	NA	NA	44218944	44219120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_44218900_44219100
Isoform_1731_16	chr10	-	1114	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	154	1267	-35	-7	multi-exon	FALSE	canonical	3	26	junction_2	0.471404520791032	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACTTTCCTTGCCTC	NA	False	NA	NA	False	AGTAAA	-15	NA	18421670	18416512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
Isoform_17310_41	chr11	-	4226	12	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	12	1422	intron_retention	FALSE	canonical	3	609	junction_5	39.8138229245543	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGCTGCTTTGA	NA	False	NA	-7	True	ATTAAA	-11	NA	106107158	106090182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
Isoform_173100_7	chr7	-	176	1	ISM	ENSMUSG00000109491.2	ENSMUST00000209101.2	1089	3	10463	18	10463	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGAAGTTACAA	6545	False	NA	NA	False	NA	NA	NA	44229585	44229409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_44229400_44229600
Isoform_173101_3	chr7	+	1101	1	Antisense	novelGene_ENSMUSG00000030739.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGGTGAATTCCTTG	5732	False	NA	NA	False	AATATA	-17	NA	44255799	44256900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_44255800_44256900
Isoform_173103_3	chr7	+	172	1	Intergenic	novelGene_10036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	44303001	44303173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_44303000_44303200
Isoform_173104_10	chr7	-	176	1	Intergenic	novelGene_10037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTTAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	44337785	44337609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_44337600_44337800
Isoform_173105_56	chr7	+	188	1	Intergenic	novelGene_10039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTTCAAGGCCAGCC	NA	False	NA	NA	False	NA	NA	NA	44369812	44370000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_44369800_44370000
Isoform_173115_4	chr7	-	2942	1	Antisense	novelGene_ENSMUSG00000109511.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCCATTCCAAGGGGA	9603	False	NA	NA	False	NA	NA	NA	44470580	44467638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_44467600_44470600
Isoform_173116_3	chr7	-	5112	1	Antisense	novelGene_ENSMUSG00000109511.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAATCAA	4813	False	NA	NA	False	AATAAA	-18	NA	44480876	44475764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_44475800_44480900
Isoform_173139_4	chr7	-	166	1	Intergenic	novelGene_10040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCCCAAAATT	9899	False	NA	NA	False	NA	NA	NA	44521493	44521327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_44521300_44521500
Isoform_173141_923	chr7	-	179	1	Intergenic	novelGene_10041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	923	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGGAAAAAAAAAAGGAT	NA	False	NA	-11	True	NA	NA	NA	44585472	44585293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_44585300_44585500
Isoform_173143_339	chr7	-	167	1	Intergenic	novelGene_9751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTGATACAGGAT	7154	False	NA	NA	False	NA	NA	NA	3242606	3242439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3242400_3242600
Isoform_173144_3	chr7	-	1066	1	Genic_Genomic	ENSMUSG00000109324.3	novel	NA	NA	NA	NA	2316	1024	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAGAAGAAAAAAAAAA	1485	False	NA	NA	False	NA	NA	NA	44625454	44624388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_-_44624400_44625500
Isoform_173147_80	chr7	+	181	1	Intergenic	novelGene_9788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	6093	False	NA	NA	False	NA	NA	NA	4819076	4819257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4819100_4819300
Isoform_173149_7	chr7	-	633	1	NIC	ENSMUSG00000007837.12	novel	1623	8	NA	NA	657	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGAGCCCCCTTTCTGG	NA	False	NA	-31	True	AATAAA	-37	NA	44703647	44703014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_44703000_44703600
Isoform_173150_6	chr7	+	177	1	Intergenic	novelGene_9789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAGAAAGAAAGAAAGAA	8865	False	NA	NA	False	NA	NA	NA	4821848	4822025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4821800_4822000
Isoform_173159_27	chr7	-	179	1	Intergenic	novelGene_10042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATATATATCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	44802644	44802465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_44802500_44802600
Isoform_173161_3	chr7	-	264	1	Intergenic	novelGene_10043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGGAAAAAA	5460	False	NA	NA	False	NA	NA	NA	44880399	44880135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_44880100_44880400
Isoform_173162_96	chr7	+	179	1	Intergenic	novelGene_10044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTTATT	NA	False	NA	NA	False	NA	NA	NA	44891982	44892161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_44892000_44892200
Isoform_173164_10	chr7	-	182	1	Intergenic	novelGene_10045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATGGATGTAA	4122	False	NA	NA	False	NA	NA	NA	44925410	44925228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_44925200_44925400
Isoform_173166_449	chr7	+	367	1	FSM	ENSMUSG00000046721.12	ENSMUST00000026901.12	653	1	-22	308	-22	-308	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAATGAGGAACAGAAT	NA	False	NA	67	True	NA	NA	NA	44974366	44974733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_44974400_44974700
Isoform_173176_7	chr7	+	2420	1	Antisense	novelGene_ENSMUSG00000003863.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACAACAGAGAGAGAGA	NA	False	NA	NA	False	AAAACA	-11	NA	45010995	45013415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_45011000_45013400
Isoform_173178_19	chr7	-	175	1	Intergenic	novelGene_10046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAAGTGGTCA	6371	False	NA	NA	False	NA	NA	NA	45021578	45021403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_45021400_45021600
Isoform_173191_8	chr7	+	2296	1	Intergenic	novelGene_10047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCGGGCAGTGGTGGTGC	NA	False	NA	NA	False	AATACA	-27	NA	45033908	45036204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_45033900_45036200
Isoform_173192_3	chr7	+	192	1	Intergenic	novelGene_10048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGAGCTCATATTGT	NA	False	NA	NA	False	NA	NA	NA	45045726	45045918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_45045700_45045900
Isoform_173194_100	chr7	-	177	1	Intergenic	novelGene_10049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAAATATTT	6158	False	NA	NA	False	NA	NA	NA	45050901	45050724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_45050700_45050900
Isoform_173195_31	chr7	+	156	1	Intergenic	novelGene_10050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	45053542	45053698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_45053500_45053700
Isoform_173198_5	chr7	+	198	1	Intergenic	novelGene_10051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGAGGGGGC	NA	False	NA	NA	False	AAGAAA	-8	NA	45096334	45096532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_45096300_45096500
Isoform_173199_4	chr7	-	267	1	Intergenic	novelGene_9790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAAACAAAATGA	NA	False	NA	NA	False	NA	NA	NA	4886713	4886446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_4886400_4886700
Isoform_1732_3	chr10	-	4379	9	FSM	ENSMUSG00000019850.12	ENSMUST00000019997.11	4422	9	40	3	6	0	multi-exon	FALSE	canonical	1	1	junction_1	0.927024810886958	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGATGCTTTCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	18891118	18876660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_18878764_18879323_18879506_18880204_18881080_18881298_18881480_18882610_18882782_18882929_18883078_18883892_18884084_18887228_18887539_18890900
Isoform_173201_483	chr7	-	1894	1	FSM	ENSMUSG00002076377.1	ENSMUST00020182363.1	109	1	-1640	-145	-1640	145	mono-exon	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109261	45107367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_45107400_45109300
Isoform_173207_160	chr1	-	175	1	Intergenic	novelGene_555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	6077	False	NA	NA	False	NA	NA	NA	165942459	165942284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_165942300_165942500
Isoform_173208_26	chr7	+	196	1	Antisense	novelGene_ENSMUSG00000011382.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCGGCCTCAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	45122632	45122828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_45122600_45122800
Isoform_173209_257	chr7	-	187	1	Intergenic	novelGene_9791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4887780	4887593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_4887600_4887800
Isoform_173210_26	chr7	-	180	1	Intergenic	novelGene_10052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAATGTAATGAAAG	2732	False	NA	NA	False	NA	NA	NA	45126056	45125876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_45125900_45126100
Isoform_173213_124	chr7	+	276	1	Intergenic	novelGene_10053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTTGTTTTGTTT	922	False	NA	NA	False	NA	NA	NA	45129966	45130242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_45130000_45130200
Isoform_173214_9	chr7	+	204	1	Intergenic	novelGene_10054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTATTTCTGACAAAGC	9544	False	NA	NA	False	AATAAA	-41	NA	45138588	45138792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_45138600_45138800
Isoform_173217_6	chr7	-	180	1	Intergenic	novelGene_10055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATTAC	NA	False	NA	NA	False	NA	NA	NA	45160795	45160615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_45160600_45160800
Isoform_173223_15	chr17	-	161	1	Intergenic	novelGene_5200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	85469131	85468970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_85469000_85469100
Isoform_173224_10	chr7	-	180	1	Intergenic	novelGene_10057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGGAAGAAGA	9597	False	NA	NA	False	NA	NA	NA	45194889	45194709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_45194700_45194900
Isoform_173225_70	chr7	+	171	1	Intergenic	novelGene_10058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	45204852	45205023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_45204900_45205000
Isoform_173228_6	chr7	-	190	1	Intergenic	novelGene_10059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTCAGTAGTCAGTCA	9999	False	NA	NA	False	NA	NA	NA	45228830	45228640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_45228600_45228800
Isoform_173230_4	chr7	+	259	1	Intergenic	novelGene_9792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGATCGTT	NA	False	NA	NA	False	NA	NA	NA	4906989	4907248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4907000_4907200
Isoform_173232_5	chr7	+	167	1	Intergenic	novelGene_10060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATATTTATGTGTTT	2069	False	NA	NA	False	NA	NA	NA	45243180	45243347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_45243200_45243300
Isoform_173235_3	chr7	-	177	1	Intergenic	novelGene_10061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAGCAAACTTCT	6895	False	NA	NA	False	NA	NA	NA	45531595	45531418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_45531400_45531600
Isoform_173237_5	chr7	-	3195	1	Antisense	novelGene_ENSMUSG00000002781.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCGCTGGAGAGATGACT	NA	False	NA	NA	False	NA	NA	NA	45559064	45555869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_45555900_45559100
Isoform_173239_3	chr7	+	176	1	Intergenic	novelGene_10062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTAAAGACTGTCC	NA	False	NA	NA	False	NA	NA	NA	45601968	45602144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_45602000_45602100
Isoform_173240_6	chr7	-	2301	1	Antisense	novelGene_ENSMUSG00000030835.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACTTAAATGTCCTTA	4535	False	NA	NA	False	NA	NA	NA	45727413	45725112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_45725100_45727400
Isoform_173243_3	chr7	-	172	1	Intergenic	novelGene_10063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCAAAAACCAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	46037885	46037713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_46037700_46037900
Isoform_173244_7	chr7	-	218	1	Intergenic	novelGene_10064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCATCATTTAATTTTG	NA	False	NA	NA	False	AATGAA	-8	NA	46328364	46328146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_46328100_46328400
Isoform_173253_5	chr7	+	247	1	Intergenic	novelGene_9793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAACAAAAACCTAAAAAA	3003	False	NA	NA	False	NA	NA	NA	4951658	4951905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4951700_4951900
Isoform_173255_44	chr7	+	193	1	Intergenic	novelGene_10065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATCCTCTGTACGGGCT	NA	False	NA	NA	False	NA	NA	NA	46477956	46478149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_46478000_46478100
Isoform_173265_17	chr7	-	177	1	Intergenic	novelGene_10066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46506625	46506448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_46506400_46506600
Isoform_173269_18	chr7	-	174	1	Intergenic	novelGene_10067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAATAAAAAGTAAT	NA	False	NA	NA	False	NA	NA	NA	46571204	46571030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_46571000_46571200
Isoform_173270_56	chr6	-	257	2	Antisense	novelGene_ENSMUSG00002075013.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	120543187	120142682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr6_-_120142764_120543011
Isoform_173272_4	chr7	-	875	1	NIC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	-5	-9585	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAGAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	46608225	46607350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_46607400_46608200
Isoform_173273_12	chr7	-	175	1	Intergenic	novelGene_10068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTGCC	NA	False	NA	NA	False	NA	NA	NA	46610017	46609842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_46609800_46610000
Isoform_173274_37	chr7	+	182	1	Intergenic	novelGene_9794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5000221	5000403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_5000200_5000400
Isoform_173276_8	chr7	-	211	1	Intergenic	novelGene_10069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAACTTCTTTGTTTTGT	1498	False	NA	NA	False	NA	NA	NA	46638299	46638088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_46638100_46638300
Isoform_173278_4	chr7	-	174	1	Intergenic	novelGene_10070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	46685306	46685132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_46685100_46685300
Isoform_173279_9	chr7	+	168	1	Intergenic	novelGene_10071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCTTGACATATGTTA	NA	False	NA	NA	False	NA	NA	NA	46686283	46686451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_46686300_46686500
Isoform_173283_4	chr7	-	158	1	Intergenic	novelGene_10073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	48209535	48209377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_48209400_48209500
Isoform_173284_6	chr7	+	174	1	Intergenic	novelGene_10074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTACTTTA	NA	False	NA	NA	False	NA	NA	NA	48401423	48401597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_48401400_48401600
Isoform_173286_12	chr7	+	2112	1	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	0	-11778	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48438779	48440891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_48438800_48440900
Isoform_173293_43	chr7	-	177	1	Intergenic	novelGene_10075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAAAAAATCCCTAT	NA	False	NA	NA	False	NA	NA	NA	48571291	48571114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_48571100_48571300
Isoform_173294_4	chr7	-	5731	1	Intergenic	novelGene_10076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAC	NA	False	NA	NA	False	NA	NA	NA	49037160	49031429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_49031400_49037200
Isoform_173295_3	chr7	+	186	1	Intergenic	novelGene_9795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGAAAGAATAGAGGAT	NA	False	NA	NA	False	NA	NA	NA	5012781	5012967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_5012800_5013000
Isoform_173297_6	chr7	-	198	1	Intergenic	novelGene_10077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAATAAAATGCATGAAT	NA	False	NA	NA	False	NA	NA	NA	49163038	49162840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_49162800_49163000
Isoform_173298_113	chr1	+	180	1	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCAAACTAG	NA	False	NA	NA	False	NA	NA	NA	54080920	54081100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_54080900_54081100
Isoform_1733_18	chr10	-	1875	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	28	6196	-10	693	multi-exon	FALSE	canonical	3	127	junction_4	9.53874490281544	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCTGTTGAGCCAA	NA	False	NA	NA	False	AATAAA	-17	NA	19783407	19735841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
Isoform_173302_7	chr7	-	165	1	Intergenic	novelGene_10080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	49241226	49241061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_49241100_49241200
Isoform_173303_26	chr7	-	159	1	Intergenic	novelGene_10081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	49275942	49275783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_49275800_49275900
Isoform_173304_3	chr7	-	249	1	Intergenic	novelGene_10082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAAAAATGGCTGACTTC	NA	False	NA	NA	False	AAGAAA	-44	NA	49280101	49279852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_49279900_49280100
Isoform_173306_14	chr7	+	186	1	Intergenic	novelGene_10083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAACATGGACT	NA	False	NA	NA	False	NA	NA	NA	49326073	49326259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_49326100_49326300
Isoform_173307_8	chr7	+	253	1	Intergenic	novelGene_10084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAAGCATTGCTAACA	682	False	NA	NA	False	NA	NA	NA	49372927	49373180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_49372900_49373200
Isoform_173312_13	chr7	+	184	1	Intergenic	novelGene_9752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGGTAGTGAGGT	NA	False	NA	NA	False	NA	NA	NA	3248538	3248722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3248500_3248700
Isoform_173314_12	chr7	-	163	1	Intergenic	novelGene_10085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGAAAGTCCAATG	NA	False	NA	NA	False	NA	NA	NA	49645950	49645787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_49645800_49646000
Isoform_173316_3140	chr7	+	1255	1	FSM	ENSMUSG00000078636.5	ENSMUST00000107041.5	1232	1	-20	-3	-20	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	51396374	51397629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_51396400_51397600
Isoform_173328_5	chr7	-	2184	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	-20	-473	-20	473	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCCAGGGTTCAACACA	NA	False	NA	NA	False	AATAAA	-27	NA	51512035	51509851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_51509900_51512000
Isoform_173329_57	chr7	-	1685	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	1	5	1	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTTTGTTCTTTGTAC	NA	False	NA	-1	True	ATTAAA	-14	NA	51512014	51510329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_51510300_51512000
Isoform_173334_24	chr7	+	176	1	Intergenic	novelGene_10086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAACCAAAACA	NA	False	NA	NA	False	NA	NA	NA	54075093	54075269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_54075100_54075300
Isoform_173338_18	chr7	+	194	1	Antisense	novelGene_ENSMUSG00000108701.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGGCAGCCTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	55577237	55577431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_55577200_55577400
Isoform_173341_4	chr7	+	179	1	Intergenic	novelGene_10087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTACAGGGTA	NA	False	NA	NA	False	NA	NA	NA	55584546	55584725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_55584500_55584700
Isoform_173342_3	chr7	+	443	1	NIC	ENSMUSG00000087178.8	novel	468	3	NA	NA	10	-10097	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTATGCTAATGCTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	55612288	55612731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_55612300_55612700
Isoform_173343_21	chr7	+	389	1	FSM	ENSMUSG00000078087.6	ENSMUST00000183090.2	399	1	25	-15	25	15	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCACGT	NA	False	NA	NA	False	AATAAA	-15	NA	55663788	55664177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_55663800_55664200
Isoform_173346_3	chr7	+	199	1	Intergenic	novelGene_10088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTCCTGGACCCTTGC	NA	False	NA	NA	False	AAGAAA	-19	NA	55695760	55695959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_55695800_55696000
Isoform_173347_3	chr7	+	200	1	Intergenic	novelGene_10089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGTCAAGCATGTTTAA	NA	False	NA	NA	False	NA	NA	NA	55755346	55755546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_55755300_55755500
Isoform_173348_5	chr7	-	1890	1	Intergenic	novelGene_10090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAACTAAATTATACCAT	NA	False	NA	NA	False	NA	NA	NA	55824886	55822996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_55823000_55824900
Isoform_173349_3	chr7	+	2179	1	NIC	ENSMUSG00000055633.7	novel	1096	2	NA	NA	7	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGTTCTTACTTGCA	2926	False	NA	4	True	AATAAA	-15	NA	5054543	5056722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_5054500_5056700
Isoform_173351_7	chr7	-	161	1	Intergenic	novelGene_10091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAGAAATATT	NA	False	NA	NA	False	NA	NA	NA	57898694	57898533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_57898500_57898700
Isoform_173352_8	chr7	+	174	1	Intergenic	novelGene_10092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAAGAACAAGA	NA	False	NA	NA	False	NA	NA	NA	58279091	58279265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_58279100_58279300
Isoform_173353_4	chr11	+	176	1	Intergenic	novelGene_1971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87360073	87360249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87360100_87360200
Isoform_173354_3	chr7	-	2269	1	FSM	ENSMUSG00000109274.2	ENSMUST00000207548.2	2773	1	-42	546	-42	-546	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGTCTGATTGTTTTG	NA	False	NA	NA	False	TTTAAA	-34	NA	5065090	5062821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_5062800_5065100
Isoform_173358_10	chr7	+	3515	1	Antisense	novelGene_ENSMUSG00000100826.7_AS_novelGene_ENSMUSG00000000948.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	59623847	59627362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_59623800_59627400
Isoform_173361_12	chr7	+	172	1	Intergenic	novelGene_10093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	61526855	61527027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_61526900_61527000
Isoform_173362_141	chr7	+	1605	1	FSM	ENSMUSG00000033585.6	ENSMUST00000038775.6	3694	1	1751	338	1751	-338	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGATACTGTGAAATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	61998067	61999672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_61998100_61999700
Isoform_173363_63	chr7	-	2560	1	FSM	ENSMUSG00000070527.4	ENSMUST00000094340.4	2547	1	-13	0	-13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGACTCTTTTTTTAAT	NA	False	NA	0	True	AATAAA	-18	NA	62069900	62067340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_62067300_62069900
Isoform_173365_25	chr7	-	2556	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	83	1	83	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAAGCCTAACATTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	62114175	62111619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_62111600_62114200
Isoform_173366_25	chr7	-	2622	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	19	-1	19	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGCCTAACATTTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	62114239	62111617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_62111600_62114200
Isoform_173367_16	chr7	-	2698	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	-59	1	-59	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAAGCCTAACATTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	62114317	62111619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_62111600_62114300
Isoform_173371_11	chr7	-	4558	2	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	2	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5083667	5079083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_5081273_5081298
Isoform_173377_344	chr7	+	175	1	Intergenic	novelGene_10094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGACTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	63439098	63439273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_63439100_63439300
Isoform_173379_3	chr7	-	1726	1	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTCCAATTTCAGAGTC	NA	False	NA	NA	False	NA	NA	NA	5096311	5094585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_5094600_5096300
Isoform_173381_6	chr7	-	3650	1	ISM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	48915	0	34870	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGCCTCGGTTGAG	NA	False	NA	-13	True	AATAAA	-16	NA	63539748	63536098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_63536100_63539700
Isoform_173386_12	chr7	-	2770	1	ISM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	49794	1	35749	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGCCTCGGTTGA	NA	False	NA	-14	True	AATAAA	-15	NA	63538869	63536099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_63536100_63538900
Isoform_173389_6	chr7	+	175	1	Intergenic	novelGene_10095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAAGTTGCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	63582631	63582806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_63582600_63582800
Isoform_17339_1734	chr11	-	2877	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	253	14	-22	-14	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	1734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAAAAGAGATAACT	NA	False	NA	-28	True	NA	NA	NA	106146652	106139981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
Isoform_173390_26	chr7	+	179	1	Intergenic	novelGene_10096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATGAATCAACC	NA	False	NA	NA	False	NA	NA	NA	63592112	63592291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_63592100_63592300
Isoform_173392_3	chr7	-	174	1	Intergenic	novelGene_10098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAATTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	63647743	63647569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_63647600_63647700
Isoform_173393_6	chr7	-	177	1	Intergenic	novelGene_10099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAGAAAGAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	63658712	63658535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_63658500_63658700
Isoform_173394_3	chr7	-	179	1	Intergenic	novelGene_10100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	63659461	63659282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_63659300_63659500
Isoform_173395_4	chr2	-	175	1	Intergenic	novelGene_6522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGACTCTGGA	7138	False	NA	NA	False	NA	NA	NA	121109321	121109146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_121109100_121109300
Isoform_173397_118	chr7	-	2845	1	FSM	ENSMUSG00000108645.2	ENSMUST00000206473.2	436	1	-1379	-1030	-1379	1030	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTAACACTTATTAAGC	NA	False	NA	NA	False	NA	NA	NA	63853651	63850806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_63850800_63853700
Isoform_173398_24	chr7	+	1217	1	Antisense	novelGene_ENSMUSG00000033458.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAACAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64022129	64023346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_64022100_64023300
Isoform_173399_10	chr7	+	908	1	NIC	ENSMUSG00000033429.11	novel	327	2	NA	NA	4	-5131	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCCCACCCCCCCACCC	NA	False	NA	NA	False	NA	NA	NA	64042491	64043399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_64042500_64043400
Isoform_1734_181	chr10	-	1459	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	14	6626	14	263	multi-exon	FALSE	canonical	3	127	junction_4	9.53874490281544	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATTTATGACATGTCA	NA	False	NA	-10	True	AATAAA	-18	NA	19783421	19736271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
Isoform_173404_32	chr7	-	1360	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	-45	4631	-45	-4631	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGCTTTAAATATACAT	NA	False	NA	1	True	AATAAA	-45	NA	64522790	64521430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_64521400_64522800
Isoform_173406_344	chr7	-	1294	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	-6	4658	-6	-4658	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAATTGTTTTAGCTT	NA	False	NA	-26	True	AATAAA	-18	NA	64522751	64521457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_64521500_64522800
Isoform_17341_231	chr11	-	3140	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	1	3	1	-3	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATAACTTTTCTGATAGT	NA	False	NA	-17	True	AATAAA	-10	NA	106146904	106139970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
Isoform_173413_3	chr7	+	2332	1	Antisense	novelGene_ENSMUSG00000030516.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTCTGTGGCAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	64963825	64966157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_64963800_64966200
Isoform_173415_3	chr7	+	426	1	Intergenic	novelGene_9753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAACAAAA	564	False	NA	NA	False	NA	NA	NA	3250426	3250852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3250400_3250900
Isoform_173416_12	chr7	-	175	1	Intergenic	novelGene_10101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAGCAACAAAACCAAAG	NA	False	NA	NA	False	NA	NA	NA	65101282	65101107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_65101100_65101300
Isoform_173417_4	chr7	-	257	1	Intergenic	novelGene_10102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAGAGACGAATGGG	NA	False	NA	NA	False	NA	NA	NA	65112297	65112040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_65112000_65112300
Isoform_173418_3	chr7	-	209	1	Intergenic	novelGene_10103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTAACTTGTCTGCAGT	NA	False	NA	NA	False	AATAGA	-11	NA	65128802	65128593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_65128600_65128800
Isoform_173419_9	chr7	+	2388	1	NIC	ENSMUSG00000078681.11	novel	1478	7	NA	NA	8	615	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65343202	65345590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_65343200_65345600
Isoform_173420_6	chr7	+	187	1	Intergenic	novelGene_10104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGCTGTGGCAGTGT	NA	False	NA	NA	False	NA	NA	NA	65468461	65468648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_65468500_65468600
Isoform_173421_112	chr7	+	188	1	Intergenic	novelGene_10105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAACAAACAAACA	NA	False	NA	6	True	NA	NA	NA	65471726	65471914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_65471700_65471900
Isoform_173422_3	chr7	+	176	1	Intergenic	novelGene_10106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	65482332	65482508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_65482300_65482500
Isoform_173423_12	chr7	-	173	1	Intergenic	novelGene_10107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATAATGTTGCGCT	2218	False	NA	NA	False	NA	NA	NA	65525568	65525395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_65525400_65525600
Isoform_173424_3	chr7	-	2195	1	Intergenic	novelGene_10108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACAGCTGTGGGGGATG	NA	False	NA	NA	False	NA	NA	NA	65531640	65529445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_65529400_65531600
Isoform_173432_58	chr5	+	176	1	Intergenic	novelGene_8440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAATAT	NA	False	NA	NA	False	NA	NA	NA	33012850	33013026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_33012800_33013000
Isoform_173433_3	chr7	-	170	1	Intergenic	novelGene_9796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAATTTGTTATGC	NA	False	NA	NA	False	NA	NA	NA	6047321	6047151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_6047200_6047300
Isoform_173434_4	chr7	-	6290	2	Intergenic	novelGene_10109	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	66150206	66143887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_66145642_66145670
Isoform_173436_4	chr7	-	3135	1	FSM	ENSMUSG00000108894.2	ENSMUST00000207700.2	164	1	-296	-2675	-296	2675	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	9851	False	NA	NA	False	NA	NA	NA	6158745	6155610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6155600_6158700
Isoform_173437_3	chr7	-	3355	1	FSM	ENSMUSG00000108894.2	ENSMUST00000207700.2	164	1	-523	-2668	-523	2668	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9624	False	NA	NA	False	NA	NA	NA	6158972	6155617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_6155600_6159000
Isoform_173440_66	chr7	+	177	1	Intergenic	novelGene_10110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	67727938	67728115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_67727900_67728100
Isoform_173441_10	chr7	-	294	1	Intergenic	novelGene_10111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	67869855	67869561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_67869600_67869900
Isoform_173442_24	chr7	-	177	1	Intergenic	novelGene_10112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGAGTGAGTGGGGCC	NA	False	NA	NA	False	NA	NA	NA	67869855	67869678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_67869700_67869900
Isoform_173444_7	chr7	-	251	1	Intergenic	novelGene_10113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACTGGAGGCATAGTA	NA	False	NA	NA	False	NA	NA	NA	67884647	67884396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_67884400_67884600
Isoform_173446_89	chr7	-	180	2	Intergenic	novelGene_10114	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATGTAGAA	NA	False	NA	NA	False	NA	NA	NA	67905256	67905056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_67905066_67905085
Isoform_173447_10	chr7	+	181	1	Intergenic	novelGene_10115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	67914964	67915145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_67915000_67915100
Isoform_173458_258	chr7	+	180	1	Intergenic	novelGene_9797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGGAA	4908	False	NA	NA	False	NA	NA	NA	6177452	6177632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_6177500_6177600
Isoform_173466_13	chr7	-	287	1	FSM	ENSMUSG00000081895.4	ENSMUST00000119383.2	555	1	-35	303	-35	-303	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTGCTGAATTTTT	7653	False	NA	NA	False	GGGGCT	-21	NA	72299094	72298807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_72298800_72299100
Isoform_173468_3	chr7	+	2009	1	FSM	ENSMUSG00000070509.16	ENSMUST00000206253.2	1972	1	-33	-4	16	4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAAAACTGA	NA	False	NA	NA	False	NA	NA	NA	73040990	73042999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_73041000_73043000
Isoform_173469_4	chr7	-	175	1	Intergenic	novelGene_10116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATGAAGGCTGTA	NA	False	NA	NA	False	NA	NA	NA	73044306	73044131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_73044100_73044300
Isoform_173470_65	chr7	+	184	1	Intergenic	novelGene_10117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	73075488	73075672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_73075500_73075700
Isoform_173471_8	chr7	-	1700	1	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	113348	61	15853	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTGCTGTACTTTTTT	NA	False	NA	-14	True	ATTAAA	-14	NA	73078146	73076446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_73076400_73078100
Isoform_173473_3	chr7	-	2479	1	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	112618	12	15123	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTTAGAATTGGGCTA	NA	False	NA	-10	True	ATTAAA	-13	NA	73078876	73076397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_73076400_73078900
Isoform_173475_4	chr7	-	2913	1	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	112137	59	14642	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTGTACTTTTTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	73079357	73076444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_73076400_73079400
Isoform_173478_5	chr7	+	3541	1	Antisense	novelGene_ENSMUSG00000078671.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAGAAAGA	2187	False	NA	NA	False	NA	NA	NA	73110471	73114012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_73110500_73114000
Isoform_173480_6	chr7	+	200	1	Intergenic	novelGene_10118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAATAAACTTC	NA	False	NA	NA	False	GATAAA	-7	NA	73198967	73199167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_73199000_73199200
Isoform_173481_3	chr7	+	1268	1	Intergenic	novelGene_10119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73268386	73269654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_73268400_73269700
Isoform_173482_3	chr7	-	189	1	Intergenic	novelGene_10120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	73292684	73292495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_73292500_73292700
Isoform_173485_33	chr7	-	176	1	Intergenic	novelGene_10121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTAAAAAAAAAAAGGA	8402	False	NA	NA	False	NA	NA	NA	73302548	73302372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_73302400_73302500
Isoform_173487_24	chr7	-	201	1	Intergenic	novelGene_10122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTCGGGAGG	1545	False	NA	NA	False	NA	NA	NA	73309405	73309204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_73309200_73309400
Isoform_173488_4	chr7	-	1326	1	FSM	ENSMUSG00000108337.2	ENSMUST00000205991.2	1108	1	2	-220	2	220	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTTATTTTGA	NA	False	NA	NA	False	NA	NA	NA	73336347	73335021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_73335000_73336300
Isoform_17349_30	chr11	-	2946	20	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-22	-14	intron_retention	FALSE	canonical	3	632	junction_6	78.119909252422	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAAAAGAGATAACT	NA	False	NA	-28	True	NA	NA	NA	106146652	106139981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
Isoform_173490_48	chr7	-	176	1	Intergenic	novelGene_10123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	7519	False	NA	NA	False	NA	NA	NA	73988861	73988685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_73988700_73988900
Isoform_173491_45	chr7	+	182	1	Intergenic	novelGene_10124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATCTTTAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	75012958	75013140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_75013000_75013100
Isoform_173492_4	chr7	+	2314	1	NIC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	6	-122500	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-15	NA	75105310	75107624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_75105300_75107600
Isoform_173493_8	chr7	-	177	1	Intergenic	novelGene_9798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAGAGAAAGA	NA	False	NA	-9	True	NA	NA	NA	6209578	6209401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_6209400_6209600
Isoform_1735_3	chr10	-	3778	16	FSM	ENSMUSG00000019982.16	ENSMUST00000188495.8	3693	16	-87	2	-8	-2	multi-exon	FALSE	canonical	2	3	junction_11	4.59951688284276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTGATGTCTCTCGA	NA	False	NA	-6	True	AATAAA	-20	NA	21036891	21000835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21020867_21021225_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
Isoform_173502_28	chr7	-	4077	1	FSM	ENSMUSG00000097415.3	ENSMUST00000206358.2	3009	1	-1069	1	-1069	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGTAGTGGTCTTGCC	NA	False	NA	-1	True	NA	NA	NA	75422863	75418786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_75418800_75422900
Isoform_173514_4	chr7	-	4169	1	FSM	ENSMUSG00000097415.3	ENSMUST00000206358.2	3009	1	-1166	6	-1166	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATTGTGGTAGTGGTC	NA	False	NA	-6	True	NA	NA	NA	75422960	75418791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_75418800_75423000
Isoform_173515_13	chr7	-	175	1	Intergenic	novelGene_10125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAATAATATGGGAA	NA	False	NA	NA	False	NA	NA	NA	75469059	75468884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_75468900_75469100
Isoform_173518_11	chr7	-	169	1	Intergenic	novelGene_10126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAGGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75521966	75521797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_75521800_75522000
Isoform_173519_147	chr7	-	177	1	Intergenic	novelGene_9754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	3256739	3256562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3256600_3256700
Isoform_173521_48	chr7	-	162	1	Intergenic	novelGene_9799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTGCGTCAGCT	NA	False	NA	-7	True	NA	NA	NA	6224825	6224663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_6224700_6224800
Isoform_173522_4	chr7	+	1023	1	FSM	ENSMUSG00000052629.6	ENSMUST00000064591.5	2205	1	-332	1514	-332	-1514	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCGAGCTATTTCCTG	NA	False	NA	12	True	AATAAA	-19	NA	78228245	78229268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78228200_78229300
Isoform_173523_20	chr7	+	952	1	FSM	ENSMUSG00000052629.6	ENSMUST00000064591.5	2205	1	-259	1512	-259	-1512	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCGAGCTATTTCCTGAG	NA	False	NA	14	True	AATAAA	-21	NA	78228318	78229270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_78228300_78229300
Isoform_173524_12	chr7	-	175	1	Intergenic	novelGene_9800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAACAAAGT	NA	False	NA	NA	False	NA	NA	NA	6265117	6264942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_6264900_6265100
Isoform_173531_27	chr7	+	213	1	Intergenic	novelGene_10127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTGCTAGTTGATGCC	2449	False	NA	NA	False	NA	NA	NA	78898461	78898674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_78898500_78898700
Isoform_173533_3	chr7	-	1220	1	Intergenic	novelGene_10128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-40	NA	78958984	78957764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_78957800_78959000
Isoform_173535_21	chr7	+	272	1	Intergenic	novelGene_10129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTAAAAGTAAAATC	NA	False	NA	NA	False	NA	NA	NA	79017778	79018050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_79017800_79018000
Isoform_173536_10	chr7	-	176	1	Intergenic	novelGene_10130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79039716	79039540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_79039500_79039700
Isoform_173537_11	chr7	-	205	1	Intergenic	novelGene_10131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79059562	79059357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_79059400_79059600
Isoform_173539_180	chr17	+	177	1	Intergenic	novelGene_5103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTTCA	NA	False	NA	NA	False	NA	NA	NA	66738914	66739091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_66738900_66739100
Isoform_173540_24	chr7	-	2320	1	FSM	ENSMUSG00000039176.18	ENSMUST00000201557.2	2279	1	-40	-1	-36	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-41	NA	79115982	79113662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79113700_79116000
Isoform_173545_31	chr7	+	1421	1	FSM	ENSMUSG00000046591.11	ENSMUST00000205750.2	1452	1	34	-3	9	3	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1984	False	NA	NA	False	NA	NA	NA	79310003	79311424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_79310000_79311400
Isoform_173551_6	chr7	-	178	1	Intergenic	novelGene_10133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAAGGGGGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	79395710	79395532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_79395500_79395700
Isoform_173552_25	chr7	-	173	1	Intergenic	novelGene_10134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGTATGTATGTCAGA	NA	False	NA	NA	False	NA	NA	NA	79396895	79396722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_79396700_79396900
Isoform_173556_3	chr7	-	205	1	Intergenic	novelGene_10135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTAGGGAGGAGAGCC	NA	False	NA	NA	False	NA	NA	NA	79548741	79548536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_79548500_79548700
Isoform_173557_4	chr7	+	188	1	Intergenic	novelGene_10136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTTTAAAAGTAGATAT	NA	False	NA	NA	False	NA	NA	NA	79553964	79554152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_79554000_79554200
Isoform_173561_63	chr7	-	177	1	Intergenic	novelGene_10137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79654222	79654045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_79654000_79654200
Isoform_173562_14	chr7	+	290	1	Intergenic	novelGene_10138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	79658795	79659085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_79658800_79659100
Isoform_173564_6	chr7	+	183	1	Intergenic	novelGene_10139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTTGTTTTGAGAC	5929	False	NA	NA	False	NA	NA	NA	79666165	79666348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_79666200_79666300
Isoform_173566_8	chr7	+	1212	1	NIC	ENSMUSG00000048897.16	novel	5871	5	NA	NA	-1	-55125	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	79674580	79675792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79674600_79675800
Isoform_173578_3	chr7	-	460	1	Intergenic	novelGene_10140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCAAAACCAAAACC	9418	False	NA	NA	False	NA	NA	NA	79781362	79780902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_79780900_79781400
Isoform_173580_13	chr7	+	180	1	Intergenic	novelGene_10141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTAAAAGGAGG	6113	False	NA	NA	False	NA	NA	NA	79817356	79817536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_79817400_79817500
Isoform_173581_389	chr7	-	174	1	Intergenic	novelGene_9801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6314128	6313954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_6314000_6314100
Isoform_173583_9	chr8	-	179	1	Intergenic	novelGene_10592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	34170049	34169870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34169900_34170000
Isoform_173584_13	chr7	+	3401	1	NIC	ENSMUSG00000030539.14	novel	3949	15	NA	NA	14	-23810	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79836602	79840003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79836600_79840000
Isoform_173585_7	chr7	+	159	1	Intergenic	novelGene_10142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	441	False	NA	NA	False	NA	NA	NA	79843012	79843171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_79843000_79843200
Isoform_173586_18	chr7	-	233	1	Antisense	novelGene_ENSMUSG00000030539.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTCGATGGGTAGGGACA	8590	False	NA	NA	False	NA	NA	NA	79876022	79875789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_79875800_79876000
Isoform_173591_12	chr7	+	268	1	Intergenic	novelGene_10143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTAATGCTCAGAT	1786	False	NA	NA	False	ATTAAA	-26	NA	79892889	79893157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_79892900_79893200
Isoform_173594_5	chr7	+	172	1	Intergenic	novelGene_10144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAACCAGGCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	79930309	79930481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_79930300_79930500
Isoform_173595_27	chr7	+	783	1	NIC	ENSMUSG00000038943.17	novel	3026	14	NA	NA	1	-9168	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79944227	79945010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_79944200_79945000
Isoform_173597_4	chr7	-	1462	1	FSM	ENSMUSG00000038930.12	ENSMUST00000205863.2	1516	1	9	45	0	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	79973873	79972411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_79972400_79973900
Isoform_1736_9	chr10	-	3415	15	FSM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	-2	-339	-2	-2	multi-exon	FALSE	canonical	2	3	junction_10	4.58257569495584	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTGATGTCTCTCGA	NA	False	NA	-6	True	AATAAA	-20	NA	21036885	21000835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
Isoform_173600_26	chr7	-	175	1	Intergenic	novelGene_10145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTACAAGGG	NA	False	NA	NA	False	NA	NA	NA	80004635	80004460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_80004500_80004600
Isoform_173601_25	chr7	+	179	1	Intergenic	novelGene_10146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCTATACTATCT	666	False	NA	NA	False	NA	NA	NA	80014881	80015060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80014900_80015100
Isoform_173604_4	chr7	-	166	1	Intergenic	novelGene_10147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAATAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80044394	80044228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_80044200_80044400
Isoform_173605_24	chr7	+	168	1	Intergenic	novelGene_10148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	80124534	80124702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80124500_80124700
Isoform_173606_5	chr7	+	161	1	Intergenic	novelGene_10149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCAATCAATCAATCAAT	NA	False	NA	NA	False	NA	NA	NA	80179539	80179700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80179500_80179700
Isoform_173607_5	chr7	+	179	1	Intergenic	novelGene_10150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAATTTAATTAA	8356	False	NA	NA	False	NA	NA	NA	80195276	80195455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80195300_80195500
Isoform_173608_35	chr7	+	187	1	Intergenic	novelGene_10151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGAGTTC	4247	False	NA	NA	False	NA	NA	NA	80202843	80203030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80202800_80203000
Isoform_173612_18	chr7	-	173	1	Intergenic	novelGene_10152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	80355721	80355548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_80355500_80355700
Isoform_173623_20	chr7	+	176	1	Intergenic	novelGene_10153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACATTGAAA	NA	False	NA	NA	False	NA	NA	NA	80422133	80422309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80422100_80422300
Isoform_173625_3	chr7	-	222	1	Intergenic	novelGene_10154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCATCAATCGCATTACT	NA	False	NA	NA	False	NA	NA	NA	80480111	80479889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_80479900_80480100
Isoform_173627_40	chr7	+	173	1	Intergenic	novelGene_10155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	80484179	80484352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80484200_80484400
Isoform_173629_12	chr7	+	179	1	Intergenic	novelGene_10156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGGCGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	80548472	80548651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80548500_80548700
Isoform_173630_18	chr7	-	181	1	FSM	ENSMUSG00000109390.2	ENSMUST00000207577.2	3794	1	3609	4	3609	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80560305	80560124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80560100_80560300
Isoform_173631_17	chr7	+	3028	1	Antisense	novelGene_ENSMUSG00000025724.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTTTCAAACAGATACA	NA	False	NA	NA	False	NA	NA	NA	80576204	80579232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_80576200_80579200
Isoform_173632_19	chr7	-	173	1	Intergenic	novelGene_9802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	6372384	6372211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_6372200_6372400
Isoform_173633_85	chr7	-	171	1	Intergenic	novelGene_10157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	80603579	80603408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_80603400_80603600
Isoform_173635_8	chr7	-	153	1	Intergenic	novelGene_10158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	80657922	80657769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_80657800_80657900
Isoform_173636_9	chr7	-	857	1	Intergenic	novelGene_10159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80787215	80786358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_80786400_80787200
Isoform_173638_7	chr7	+	173	1	Intergenic	novelGene_10160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCTTTTAAAAAATAAA	698	False	NA	NA	False	NA	NA	NA	80804214	80804387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80804200_80804400
Isoform_173639_194	chr7	+	173	1	Intergenic	novelGene_10161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5567	False	NA	NA	False	NA	NA	NA	80836395	80836568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80836400_80836600
Isoform_17364_3545	chr11	-	2762	13	FSM	ENSMUSG00000078619.11	ENSMUST00000021052.16	2747	13	-17	2	-17	-2	multi-exon	FALSE	canonical	3	510	junction_5	34.2842488939487	3545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCAGACCTGGTCATT	NA	False	NA	-9	True	AATAAA	-18	NA	106163815	106154006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
Isoform_173640_8	chr7	-	3198	1	FSM	ENSMUSG00000083774.2	ENSMUST00000121753.2	513	1	-2386	-299	-2386	299	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-37	NA	80875008	80871810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_80871800_80875000
Isoform_173641_6	chr7	-	2778	1	Intergenic	novelGene_10162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	9397	False	NA	NA	False	NA	NA	NA	80895673	80892895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_80892900_80895700
Isoform_173642_24	chr7	+	175	1	Intergenic	novelGene_10163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATGTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80987219	80987394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_80987200_80987400
Isoform_173645_4	chr7	-	881	1	Intergenic	novelGene_10164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCTGATT	NA	False	NA	NA	False	AATAAA	-10	NA	81071095	81070214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_81070200_81071100
Isoform_17365_188	chr11	-	2793	13	FSM	ENSMUSG00000078619.11	ENSMUST00000021052.16	2747	13	-46	0	-46	0	multi-exon	FALSE	canonical	3	510	junction_5	34.2842488939487	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGACCTGGTCATTGA	NA	False	NA	-7	True	AATAAA	-20	NA	106163844	106154004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
Isoform_173650_10	chr7	-	180	1	Intergenic	novelGene_10165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTTTCAAGTTTT	2455	False	NA	NA	False	NA	NA	NA	81370032	81369852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_81369900_81370000
Isoform_173653_4	chr7	+	171	1	Intergenic	novelGene_10166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	81437445	81437616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_81437400_81437600
Isoform_173659_25	chr7	-	177	1	Intergenic	novelGene_10171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAAACTTGGG	NA	False	NA	NA	False	NA	NA	NA	81968400	81968223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_81968200_81968400
Isoform_173660_5	chr7	-	2679	1	Intergenic	novelGene_10172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAATGACGTAAG	NA	False	NA	NA	False	NA	NA	NA	82360816	82358137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_82358100_82360800
Isoform_173663_4	chr7	-	202	1	Intergenic	novelGene_10173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTTTTAAAAACTGTA	NA	False	NA	NA	False	NA	NA	NA	82623684	82623482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_82623500_82623700
Isoform_173665_19	chr7	-	176	1	ISM	ENSMUSG00000087088.3	ENSMUST00000208892.2	8508	2	12297	926	12259	-926	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATGGGATGTAT	NA	False	NA	NA	False	NA	NA	NA	83268791	83268615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_83268600_83268800
Isoform_173666_9	chr7	+	477	1	NIC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	0	-879	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83281207	83281684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_83281200_83281700
Isoform_173669_4	chr7	+	6424	1	Intergenic	novelGene_9803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6593972	6600396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_6594000_6600400
Isoform_173670_8	chr7	-	3845	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	4	584	4	-584	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAGTAATAGTGTGTAT	NA	False	NA	NA	False	TATAAA	-34	NA	83533509	83529664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_83529700_83533500
Isoform_173672_439	chr7	-	2791	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	-3	1645	-3	-1645	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTTCGCAGTTACTGT	NA	False	NA	-11	True	ATTAAA	-18	NA	83533516	83530725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_83530700_83533500
Isoform_173676_36	chr7	-	2995	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	-207	1645	-207	-1645	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTTCGCAGTTACTGT	NA	False	NA	-11	True	ATTAAA	-18	NA	83533720	83530725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_83530700_83533700
Isoform_173677_42	chr7	-	2861	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	-73	1645	-73	-1645	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTTCGCAGTTACTGT	NA	False	NA	-11	True	ATTAAA	-18	NA	83533586	83530725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_83530700_83533600
Isoform_173702_6	chr7	-	178	1	Intergenic	novelGene_10174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAAAAAATTCCTAC	4849	False	NA	NA	False	NA	NA	NA	84674524	84674346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_84674300_84674500
Isoform_173708_19	chr7	+	160	1	Intergenic	novelGene_10175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTAAAAAAAGATATTG	NA	False	NA	NA	False	NA	NA	NA	86008292	86008452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_86008300_86008500
Isoform_173710_18	chr7	-	549	1	FSM	ENSMUSG00000069972.7	ENSMUST00000182017.2	453	1	-26	-70	-26	70	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGGGTGCGTGCCCCTC	NA	False	NA	NA	False	AATAAA	-42	NA	88180132	88179583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_88179600_88180100
Isoform_173712_45	chr7	-	3376	3	NNC	ENSMUSG00000055452.7	novel	2866	3	NA	NA	4	514	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACCATAGGACCTGTGG	7188	False	NA	NA	False	AATAAA	-44	NA	3161959	3158505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_3160170_3160217_3161875_3161904
Isoform_173713_102	chr7	+	3126	3	Genic_Genomic	ENSMUSG00000077903.3_ENSMUSG00000077886.3_ENSMUSG00000077815.3	novel	84	1	NA	NA	-788	174	multi-exon	TRUE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGCTTTCTCAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	3266511	3269689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_+_3267572_3267596_3268625_3268651
Isoform_173720_4	chr7	-	177	1	Intergenic	novelGene_9804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGACATTACAC	NA	False	NA	NA	False	NA	NA	NA	6902011	6901834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_6901800_6902000
Isoform_173723_77	chr7	+	166	1	Intergenic	novelGene_10176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAAGAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	88992133	88992299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_88992100_88992300
Isoform_173724_45	chr7	-	178	1	Intergenic	novelGene_10177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATTAAAGCTGTAA	NA	False	NA	NA	False	NA	NA	NA	89119571	89119393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_89119400_89119600
Isoform_173725_9	chr7	-	2573	1	FSM	ENSMUSG00000062797.15	ENSMUST00000207695.2	2539	1	-38	4	-2	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTATTTTGCCTTATG	NA	False	NA	NA	False	AATAAA	-11	NA	89590409	89587836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_89587800_89590400
Isoform_173732_3	chr7	-	172	1	Intergenic	novelGene_10178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAATAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	89636059	89635887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_89635900_89636100
Isoform_173733_5	chr7	-	237	1	Intergenic	novelGene_10179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCAGTGTGTAGGG	NA	False	NA	NA	False	NA	NA	NA	89659835	89659598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_89659600_89659800
Isoform_173739_149	chr7	+	3930	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	87	-641	87	641	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTCTTACTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	90092023	90095953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90092000_90096000
Isoform_173741_12	chr7	+	4934	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	56	-1614	56	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATTAGTGTCTTAAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	90091992	90096926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_90092000_90096900
Isoform_173746_5	chr7	-	2262	1	FSM	ENSMUSG00000030615.13	ENSMUST00000208639.2	1730	1	-12	-520	11	269	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1677	False	NA	NA	False	NA	NA	NA	90106405	90104143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_90104100_90106400
Isoform_173747_8	chr7	-	166	1	Intergenic	novelGene_10180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATATAATTACAT	NA	False	NA	NA	False	NA	NA	NA	90319331	90319165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_90319200_90319300
Isoform_173750_16	chr7	+	176	1	Intergenic	novelGene_10181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATACTGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	92218966	92219142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_92219000_92219100
Isoform_173751_21	chr7	+	177	1	Intergenic	novelGene_10182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATGTTGGCAAA	NA	False	NA	NA	False	NA	NA	NA	92303511	92303688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_92303500_92303700
Isoform_173752_10	chr7	+	5232	1	Antisense	novelGene_ENSMUSG00000041328.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-44	NA	92310035	92315267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_92310000_92315300
Isoform_173753_10	chr7	+	200	1	Intergenic	novelGene_9805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAGTTAAAAAAAAAAAAG	1828	False	NA	NA	False	NA	NA	NA	6978918	6979118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_6978900_6979100
Isoform_173754_10	chr7	-	1740	1	FSM	ENSMUSG00000041328.17	ENSMUST00000208255.2	1720	1	-27	7	4	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTATTTGTCTTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	92319138	92317398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_92317400_92319100
Isoform_173756_4	chr7	-	7292	1	FSM	ENSMUSG00000074024.6	ENSMUST00000182578.2	3832	1	11	-3471	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92390665	92383373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_92383400_92390700
Isoform_173761_10	chr7	+	249	1	Intergenic	novelGene_10183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCTATGCCAATATCT	7749	False	NA	NA	False	AATAAA	-34	NA	92401160	92401409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_92401200_92401400
Isoform_173764_9	chr7	+	1797	1	FSM	ENSMUSG00000051515.12	ENSMUST00000051179.12	2002	1	54	151	54	-151	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAATGGAACAGAGGTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	92729126	92730923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_92729100_92730900
Isoform_173766_1411	chr7	-	690	1	FSM	ENSMUSG00000087412.5	ENSMUST00000140687.2	625	1	-23	-42	-23	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1411	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	92828875	92828185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_92828200_92828900
Isoform_173777_24	chr7	-	173	1	Intergenic	novelGene_10184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGTATGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93314496	93314323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_93314300_93314500
Isoform_173778_3	chr7	-	2075	1	FSM	ENSMUSG00000108528.2	ENSMUST00000205708.2	641	1	-488	-946	-488	946	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAAAGCTGGGGATTT	NA	False	NA	NA	False	NA	NA	NA	95853231	95851156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_95851200_95853200
Isoform_173779_5	chr7	-	1222	1	FSM	ENSMUSG00000108528.2	ENSMUST00000205708.2	641	1	-488	-93	-488	93	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTAAGATTTGTTT	NA	False	NA	NA	False	AAGAAA	-15	NA	95853231	95852009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_95852000_95853200
Isoform_173780_5	chr7	+	562	1	FSM	ENSMUSG00000076143.3	ENSMUST00000102189.3	109	1	96	-549	96	549	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGATAAGTGTCATCTT	NA	False	NA	NA	False	CATAAA	-16	NA	95898726	95899288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_95898700_95899300
Isoform_173781_23	chr7	-	175	1	Intergenic	novelGene_10185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95908635	95908460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_95908500_95908600
Isoform_173782_3	chr7	-	2925	1	Intergenic	novelGene_10186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCCAAGTCCGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	96274919	96271994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_96272000_96274900
Isoform_173783_11	chr7	-	183	1	Intergenic	novelGene_10187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTTAAAAAAAAACCAGCA	NA	False	NA	NA	False	NA	NA	NA	96336194	96336011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_96336000_96336200
Isoform_173784_118	chr7	+	165	1	Intergenic	novelGene_10188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAACAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96402220	96402385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_96402200_96402400
Isoform_173786_3	chr13	+	165	1	Intergenic	novelGene_3105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATTTTGGGGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	58621359	58621524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_58621400_58621500
Isoform_173787_25	chr7	+	189	1	Intergenic	novelGene_10189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAGGGACTATTACATA	8621	False	NA	NA	False	NA	NA	NA	96627717	96627906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_96627700_96627900
Isoform_173789_5	chr7	-	177	1	Intergenic	novelGene_10190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	96933052	96932875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_96932900_96933100
Isoform_173790_59	chr7	-	175	1	Intergenic	novelGene_10191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGAAGTTT	6448	False	NA	NA	False	NA	NA	NA	96945413	96945238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_96945200_96945400
Isoform_173791_31	chr7	-	3649	1	NIC	ENSMUSG00000063535.8	novel	4073	4	NA	NA	6002	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTTGCGTCTTTCT	3024	False	NA	NA	False	NA	NA	NA	7133721	7130072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_7130100_7133700
Isoform_173792_3	chr7	+	173	1	Intergenic	novelGene_10192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATCCTCTCTGGG	7640	False	NA	NA	False	NA	NA	NA	97119322	97119495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_97119300_97119500
Isoform_173793_62	chr7	+	173	1	Intergenic	novelGene_10193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	9818	False	NA	NA	False	NA	NA	NA	97121500	97121673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_97121500_97121700
Isoform_173794_9	chr7	-	178	1	Intergenic	novelGene_10194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATACATGTACAT	NA	False	NA	NA	False	NA	NA	NA	97137151	97136973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_97137000_97137200
Isoform_173796_9	chr9	+	200	1	Intergenic	novelGene_11421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCTGACCTGCAAA	NA	False	NA	NA	False	NA	NA	NA	65716774	65716974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65716800_65717000
Isoform_173797_3	chr7	+	3155	1	Antisense	novelGene_ENSMUSG00000035642.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTCAGACAAGCTGCAC	NA	False	NA	NA	False	NA	NA	NA	97224836	97227991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_97224800_97228000
Isoform_173798_4	chr7	+	3100	1	FSM	ENSMUSG00000035623.15	ENSMUST00000205536.2	3085	1	6	-21	-2	21	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	97229101	97232201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_97229100_97232200
Isoform_173799_4	chr7	+	287	1	Intergenic	novelGene_10195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAAGGGAAAAA	1961	False	NA	NA	False	NA	NA	NA	97301238	97301525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_97301200_97301500
Isoform_173801_6	chr7	-	159	1	Intergenic	novelGene_10196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	97459661	97459502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_97459500_97459700
Isoform_173802_25	chr7	+	177	1	Intergenic	novelGene_10197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	97477661	97477838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_97477700_97477800
Isoform_173803_4	chr7	-	188	1	Intergenic	novelGene_10198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAGACATCCTAT	NA	False	NA	NA	False	NA	NA	NA	97481023	97480835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_97480800_97481000
Isoform_173804_4	chr7	+	168	1	Intergenic	novelGene_10199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTGA	7066	False	NA	NA	False	AATAAA	-15	NA	97742275	97742443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_97742300_97742400
Isoform_173808_35	chr7	-	183	1	Intergenic	novelGene_10200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAACCCG	NA	False	NA	NA	False	NA	NA	NA	97830097	97829914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_97829900_97830100
Isoform_173809_4	chr7	+	2471	1	Intergenic	novelGene_10201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCAAACTGATTTAAAAA	581	False	NA	NA	False	TATAAA	-38	NA	97831573	97834044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_97831600_97834000
Isoform_17381_47	chr11	-	1249	6	FSM	ENSMUSG00000040592.12	ENSMUST00000167143.2	1195	6	-53	-1	-53	1	multi-exon	FALSE	canonical	3	38	junction_4	7.4027022093287	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTTCGTGATATCATC	5036	False	NA	-2	True	AATAAA	-18	NA	106205408	106202168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106202732_106202832_106202875_106203147_106203267_106203458_106203768_106204486_106204538_106205243
Isoform_173811_10	chr7	+	259	1	Intergenic	novelGene_9755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTTATATAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	3272710	3272969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3272700_3273000
Isoform_173812_26	chr7	+	156	1	Intergenic	novelGene_10202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	97854082	97854238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_97854100_97854200
Isoform_173814_17	chr7	+	174	1	Intergenic	novelGene_10203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTCACATAATTT	NA	False	NA	NA	False	NA	NA	NA	97930228	97930402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_97930200_97930400
Isoform_173815_9	chr7	+	178	1	Intergenic	novelGene_10204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	97943871	97944049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_97943900_97944000
Isoform_173818_4	chr7	+	909	1	Intergenic	novelGene_10205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAGAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	98306129	98307038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_98306100_98307000
Isoform_173822_14	chr7	+	169	1	Intergenic	novelGene_10206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGAATCTTTTTTTT	NA	False	NA	10	True	NA	NA	NA	98439098	98439267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_98439100_98439300
Isoform_173824_4	chr7	+	3090	1	Intergenic	novelGene_10208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98577318	98580408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_98577300_98580400
Isoform_173825_7	chr7	-	187	1	Intergenic	novelGene_10209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAAGTCACTTGGGTCC	1695	False	NA	NA	False	NA	NA	NA	98701221	98701034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_98701000_98701200
Isoform_173828_66	chr7	-	173	1	Intergenic	novelGene_10210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGCAACGTGAGC	NA	False	NA	NA	False	NA	NA	NA	98899735	98899562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_98899600_98899700
Isoform_17383_11	chr11	-	6998	22	FSM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	-53	1	3	-1	multi-exon	FALSE	canonical	2	5	junction_11	5.67646212197547	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTGCCTTGTTTCTTAA	9436	False	NA	-2	True	AATAAA	-17	NA	106378675	106285476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
Isoform_173836_21	chr7	+	170	1	Intergenic	novelGene_10211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	99124640	99124810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_99124600_99124800
Isoform_173838_24	chr7	-	177	1	Intergenic	novelGene_10212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7704	False	NA	NA	False	NA	NA	NA	99154517	99154340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_99154300_99154500
Isoform_17384_4	chr11	-	1932	11	FSM	ENSMUSG00000020715.10	ENSMUST00000106801.8	1957	11	-4	29	-4	-29	multi-exon	FALSE	canonical	3	10	junction_8	5.58927544499285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTAGAGAATACAATTAAT	9445	False	NA	NA	False	ATTAAA	-23	NA	106378666	106304620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
Isoform_173840_10	chr7	-	177	1	Intergenic	novelGene_10213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	99196637	99196460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_99196500_99196600
Isoform_173842_8	chr7	+	177	1	Intergenic	novelGene_9807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9872459	9872636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_9872500_9872600
Isoform_173843_27	chr7	-	174	1	Intergenic	novelGene_10215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATTCTAGGTCA	4047	False	NA	NA	False	NA	NA	NA	99531999	99531825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_99531800_99532000
Isoform_173848_6	chr7	-	174	1	Intergenic	novelGene_9756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	3273561	3273387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3273400_3273600
Isoform_173850_4	chr7	+	193	1	Intergenic	novelGene_10216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAGCTTAAATCTGGA	NA	False	NA	NA	False	NA	NA	NA	99979685	99979878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_99979700_99979900
Isoform_173852_5	chr7	-	166	1	Intergenic	novelGene_10217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTCGGAGCGAGTGGAG	NA	False	NA	NA	False	NA	NA	NA	100141098	100140932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100140900_100141100
Isoform_173853_79	chr7	+	174	2	Intergenic	novelGene_10218	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	427	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTATGATTCTTGTAA	NA	False	NA	33	True	NA	NA	NA	100169705	100169899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_100169786_100169805
Isoform_173854_8	chr7	-	177	1	Intergenic	novelGene_10219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATTTACTTACATA	NA	False	NA	NA	False	NA	NA	NA	100178617	100178440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100178400_100178600
Isoform_173855_31	chr11	+	176	1	Intergenic	novelGene_2155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	3660	False	NA	NA	False	NA	NA	NA	102280479	102280655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102280500_102280700
Isoform_173857_22	chr7	-	171	1	Intergenic	novelGene_10220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	100179497	100179326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100179300_100179500
Isoform_173858_3	chr7	+	170	1	Intergenic	novelGene_9783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	4729638	4729808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_4729600_4729800
Isoform_173859_5	chr7	-	2145	1	FSM	ENSMUSG00000030706.18	ENSMUST00000208916.2	2144	1	-27	26	0	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	100232309	100230164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_100230200_100232300
Isoform_173864_25	chr7	-	213	1	Intergenic	novelGene_10221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAGGCCCTGACACAAA	NA	False	NA	NA	False	NA	NA	NA	100282145	100281932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100281900_100282100
Isoform_173870_160	chr7	-	178	1	Intergenic	novelGene_10222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATAAAAATTACT	NA	False	NA	NA	False	NA	NA	NA	100333146	100332968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100333000_100333100
Isoform_173876_34	chr7	-	175	1	Intergenic	novelGene_10224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100481671	100481496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100481500_100481700
Isoform_173879_747	chr7	+	182	1	Intergenic	novelGene_10225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	747	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTACATGAGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	100633171	100633353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_100633200_100633400
Isoform_173880_75	chr7	-	174	1	Intergenic	novelGene_10226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAATCTGTAA	NA	False	NA	NA	False	NA	NA	NA	100791183	100791009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100791000_100791200
Isoform_173881_4	chr7	-	183	1	Intergenic	novelGene_10227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAACTAAACATAA	2432	False	NA	NA	False	NA	NA	NA	100860967	100860784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100860800_100861000
Isoform_173882_3	chr7	-	193	1	Intergenic	novelGene_10228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAATAAAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	100900048	100899855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100899900_100900000
Isoform_173884_6	chr7	+	177	1	Intergenic	novelGene_10229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGACATTAAAA	NA	False	NA	NA	False	NA	NA	NA	100963108	100963285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_100963100_100963300
Isoform_173885_9	chr7	-	181	1	Intergenic	novelGene_10230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAAAGAATGC	NA	False	NA	NA	False	NA	NA	NA	101156057	101155876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101155900_101156100
Isoform_173886_5	chr7	-	290	1	Intergenic	novelGene_10231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCTCTGCAGGAACT	NA	False	NA	NA	False	NA	NA	NA	101271222	101270932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101270900_101271200
Isoform_173888_63	chr7	-	158	1	Intergenic	novelGene_10232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGAATCAAGGTGGGC	NA	False	NA	NA	False	NA	NA	NA	101276518	101276360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101276400_101276500
Isoform_173890_41	chr7	+	158	1	Intergenic	novelGene_10233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAACATGAC	NA	False	NA	NA	False	NA	NA	NA	101473992	101474150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_101474000_101474200
Isoform_173891_15	chr7	+	164	1	Intergenic	novelGene_10234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGTGGTTTGACCC	NA	False	NA	NA	False	NA	NA	NA	101496507	101496671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_101496500_101496700
Isoform_173892_22	chr7	-	177	1	Intergenic	novelGene_10235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACTTTAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	101497244	101497067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101497100_101497200
Isoform_173894_10	chr18	-	177	1	Intergenic	novelGene_5385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAAAAGCACTGAC	4509	False	NA	NA	False	NA	NA	NA	36708852	36708675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36708700_36708900
Isoform_173895_3	chr7	-	316	1	Intergenic	novelGene_10237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101521594	101521278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101521300_101521600
Isoform_1739_5	chr10	-	2018	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181677.2	617	2	-209	-1192	0	1192	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCACTCTACTCTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	22024718	21992068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_21993756_22024387
Isoform_173900_13	chr7	-	172	1	Intergenic	novelGene_10238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	101574991	101574819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101574800_101575000
Isoform_173901_7	chr7	-	2292	1	Intergenic	novelGene_10239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGACTTGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	101594287	101591995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101592000_101594300
Isoform_173903_36	chr6	+	177	1	Intergenic	novelGene_9300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAACTC	NA	False	NA	NA	False	NA	NA	NA	39271579	39271756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_39271600_39271800
Isoform_173904_9	chr7	-	179	1	Intergenic	novelGene_10241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTCAGTGTTAT	4786	False	NA	NA	False	NA	NA	NA	101615860	101615681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101615700_101615900
Isoform_173906_3	chr7	+	1498	1	Genic_Genomic	ENSMUSG00000099481.7_ENSMUSG00000070425.14	novel	NA	NA	NA	NA	-10	-3005	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	101714707	101716205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_+_101714700_101716200
Isoform_173911_5	chr7	-	180	1	ISM	ENSMUSG00000063550.9	ENSMUST00000211005.2	3961	20	64725	417	38423	365	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGCAAGTAA	NA	False	NA	NA	False	NA	NA	NA	101794349	101794169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_101794200_101794300
Isoform_173914_15	chr7	+	177	1	Intergenic	novelGene_10243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5976	False	NA	NA	False	NA	NA	NA	101826721	101826898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_101826700_101826900
Isoform_173915_143	chr7	+	177	1	Intergenic	novelGene_10244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101831890	101832067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_101831900_101832100
Isoform_173917_4	chr7	-	208	1	Intergenic	novelGene_10245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTAAGAGTCTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	101938816	101938608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101938600_101938800
Isoform_173921_5	chr7	-	6833	1	Antisense	novelGene_ENSMUSG00000030978.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1517	False	NA	NA	False	NA	NA	NA	102098725	102091892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_102091900_102098700
Isoform_173924_4	chr7	+	217	1	Intergenic	novelGene_10247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102127865	102128082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_102127900_102128100
Isoform_173925_33	chr7	-	176	1	Intergenic	novelGene_10248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	102275414	102275238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_102275200_102275400
Isoform_173928_3	chr7	+	182	1	Intergenic	novelGene_10249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	103867407	103867589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_103867400_103867600
Isoform_17393_157	chr11	-	4812	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-67	189	-67	57	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3264	False	NA	-1	True	ATTAAA	-27	NA	106503823	106393161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
Isoform_173930_11	chr7	-	340	1	Intergenic	novelGene_10250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCAGTGGTGCCCCAC	9402	False	NA	NA	False	NA	NA	NA	103872666	103872326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_103872300_103872700
Isoform_17394_18	chr11	-	5007	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-66	-7	-66	7	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATGTTATTTTTT	3265	False	NA	NA	False	AATAAA	-18	NA	106503822	106392965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
Isoform_173942_29	chr7	-	252	1	Intergenic	novelGene_10251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	103907029	103906777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_103906800_103907000
Isoform_173944_30	chr7	-	188	1	Intergenic	novelGene_10252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTTAGAATTTATTAGT	NA	False	NA	NA	False	NA	NA	NA	103986494	103986306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_103986300_103986500
Isoform_173947_27	chr7	+	175	1	Intergenic	novelGene_9809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	11859977	11860152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_11860000_11860200
Isoform_173949_3	chr10	+	157	1	Intergenic	novelGene_794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	35468472	35468629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_35468500_35468600
Isoform_173953_8	chr7	-	188	1	Intergenic	novelGene_9810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACACCATTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12177325	12177137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_12177100_12177300
Isoform_173958_288	chr7	+	1494	1	FSM	ENSMUSG00000073894.2	ENSMUST00000098135.2	1472	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTGCGTAGTAGTCT	NA	False	NA	20	True	NA	NA	NA	106808629	106810123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_106808600_106810100
Isoform_173959_973	chr7	+	1470	1	FSM	ENSMUSG00000073894.2	ENSMUST00000098135.2	1472	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	973	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTGCGTAGTAGTCT	NA	False	NA	20	True	NA	NA	NA	106808653	106810123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_106808700_106810100
Isoform_173969_6	chr7	-	2526	1	Antisense	novelGene_ENSMUSG00000057215.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106899277	106896751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_106896800_106899300
Isoform_173970_6	chr7	-	2524	1	Intergenic	novelGene_10256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106958676	106956152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_106956200_106958700
Isoform_173971_9	chrX	-	195	1	Intergenic	novelGene_11862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAATAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	12738902	12738707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_12738700_12738900
Isoform_173974_12	chr7	+	156	1	Intergenic	novelGene_10257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAAATAAAATTTTT	4112	False	NA	NA	False	NA	NA	NA	107171101	107171257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_107171100_107171300
Isoform_173976_20	chr7	+	177	1	Intergenic	novelGene_9811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTCCC	NA	False	NA	NA	False	NA	NA	NA	12456040	12456217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_12456000_12456200
Isoform_173977_10	chr7	-	176	1	Intergenic	novelGene_10258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTACTATATTACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107871148	107870972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_107871000_107871100
Isoform_173981_3	chr7	-	4311	1	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-1	1731	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108682530	108678219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_108678200_108682500
Isoform_173982_8	chr7	-	3173	1	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-3	602	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTCTGGGCTAGAGA	NA	False	NA	NA	False	NA	NA	NA	108682521	108679348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_108679300_108682500
Isoform_173984_12	chr7	+	176	1	Intergenic	novelGene_10259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGCGAACGGGGCC	NA	False	NA	NA	False	NA	NA	NA	109075732	109075908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109075700_109075900
Isoform_173985_3	chr7	+	174	1	Intergenic	novelGene_10260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	109098771	109098945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109098800_109098900
Isoform_173990_79	chr13	+	177	1	Intergenic	novelGene_3082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAATAAAATA	3345	False	NA	NA	False	NA	NA	NA	55638364	55638541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55638400_55638500
Isoform_173991_4	chr7	-	175	1	Intergenic	novelGene_10261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	109256756	109256581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109256600_109256800
Isoform_173992_9	chr7	-	199	1	Intergenic	novelGene_10262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCAGCTTCCATATAT	NA	False	NA	NA	False	NA	NA	NA	109260097	109259898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109259900_109260100
Isoform_173993_11	chr7	+	184	1	Intergenic	novelGene_10263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACTTTCATTAAAA	NA	False	NA	NA	False	NA	NA	NA	109267282	109267466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109267300_109267500
Isoform_173994_44	chr7	+	173	1	Intergenic	novelGene_9812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12549583	12549756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_12549600_12549800
Isoform_173995_5	chr7	+	168	1	Intergenic	novelGene_10264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGTTATAGGAT	NA	False	NA	NA	False	NA	NA	NA	109279584	109279752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109279600_109279800
Isoform_173997_14	chr7	+	184	1	Intergenic	novelGene_10265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	109376034	109376218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109376000_109376200
Isoform_1740_24	chr10	-	574	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181614.2	548	2	-23	-3	-23	3	multi-exon	FALSE	canonical	3	41	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCCTTGGTTTTATC	NA	False	NA	-5	True	NA	NA	NA	22024745	22020197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_22020414_22024387
Isoform_17400_4	chr11	-	4819	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	5449	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.8027973869368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	8780	False	NA	-1	True	ATTAAA	-27	NA	106498307	106393161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106498160
Isoform_174001_76	chr7	+	339	1	Intergenic	novelGene_10266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109584077	109584416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109584100_109584400
Isoform_174004_31	chr7	-	195	1	Intergenic	novelGene_10267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAAATTCTGA	9615	False	NA	NA	False	NA	NA	NA	109599612	109599417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109599400_109599600
Isoform_174016_3	chr7	-	1879	2	Genic_Genomic	ENSMUSG00000073867.3	novel	3339	1	NA	NA	-3	-1434	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAAAAAATTAGGGCAT	5162	False	NA	NA	False	NA	NA	NA	109660535	109658627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_-_109659269_109659297
Isoform_174017_6	chr7	-	172	1	Intergenic	novelGene_10268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAATCTTTAATTGA	3204	False	NA	NA	False	NA	NA	NA	109669034	109668862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109668900_109669000
Isoform_174018_8	chr7	+	170	1	Intergenic	novelGene_10269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATACATATAGATA	NA	False	NA	2	True	NA	NA	NA	109694680	109694850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109694700_109694800
Isoform_174019_12	chr7	+	177	1	Intergenic	novelGene_10270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGTCTTTTGCATG	1480	False	NA	NA	False	NA	NA	NA	109705195	109705372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109705200_109705400
Isoform_174020_12	chr7	-	333	1	Intergenic	novelGene_10271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGACTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	109707801	109707468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109707500_109707800
Isoform_174021_17	chr7	-	180	1	Intergenic	novelGene_10272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGGGGGGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	109707801	109707621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109707600_109707800
Isoform_174028_3	chr7	-	490	1	Intergenic	novelGene_10273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCAGAATTGCAGAAA	8138	False	NA	NA	False	AATAAA	-36	NA	109715736	109715246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109715200_109715700
Isoform_174029_4	chr7	-	281	1	Intergenic	novelGene_10274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAACTCCCAACTGGTA	8137	False	NA	NA	False	NA	NA	NA	109715737	109715456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109715500_109715700
Isoform_174031_4	chr7	-	3769	2	Antisense	novelGene_ENSMUSG00000109904.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCCAGGTCTCCCTTT	9848	False	NA	NA	False	AATAAA	-18	NA	109721863	109718072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_109718496_109718517
Isoform_174032_3	chr7	-	4025	1	Antisense	novelGene_ENSMUSG00000031016.10_AS_novelGene_ENSMUSG00000109904.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTCTCCCAGGTCTC	9609	False	NA	NA	False	AATAAA	-13	NA	109722102	109718077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_109718100_109722100
Isoform_174033_106	chr7	+	999	1	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	20	-20222	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTGGC	NA	False	NA	NA	False	NA	NA	NA	109721272	109722271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_109721300_109722300
Isoform_174038_6	chr7	-	162	1	Intergenic	novelGene_10275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAGGCCACTA	NA	False	NA	NA	False	NA	NA	NA	109760767	109760605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109760600_109760800
Isoform_174039_55	chr7	+	168	1	Intergenic	novelGene_10276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATGCT	NA	False	NA	NA	False	NA	NA	NA	109766852	109767020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109766900_109767000
Isoform_174041_3	chr7	-	169	1	Intergenic	novelGene_10277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAGAAGAAGCA	8342	False	NA	NA	False	NA	NA	NA	109773662	109773493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_109773500_109773700
Isoform_174043_84	chr7	+	172	1	Intergenic	novelGene_10278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	7078	False	NA	NA	False	NA	NA	NA	109805753	109805925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_109805800_109805900
Isoform_174050_28	chr7	+	177	1	Intergenic	novelGene_10279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	8647	False	NA	NA	False	NA	NA	NA	110142901	110143078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_110142900_110143100
Isoform_174052_5	chr3	-	183	1	Intergenic	novelGene_7109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACTAGCA	NA	False	NA	NA	False	NA	NA	NA	88535563	88535380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_88535400_88535600
Isoform_174053_48	chr7	+	170	1	Intergenic	novelGene_9813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATGTATCTAAT	6426	False	NA	NA	False	NA	NA	NA	12610153	12610323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_12610200_12610300
Isoform_174054_7	chr7	-	200	1	Intergenic	novelGene_10280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	110220864	110220664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_110220700_110220900
Isoform_174058_3	chr7	+	167	1	Antisense	novelGene_ENSMUSG00000005610.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	110668356	110668523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_110668400_110668500
Isoform_174070_9	chr7	+	2197	1	Antisense	novelGene_ENSMUSG00000005610.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAACAA	NA	False	NA	NA	False	TTTAAA	-14	NA	110672924	110675121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_110672900_110675100
Isoform_174071_7	chr7	+	174	1	Intergenic	novelGene_10281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAACCAAGAAG	NA	False	NA	NA	False	NA	NA	NA	110693074	110693248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_110693100_110693200
Isoform_174072_16	chr7	-	166	1	Intergenic	novelGene_10282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAACAAAGCC	NA	False	NA	NA	False	NA	NA	NA	110706885	110706719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_110706700_110706900
Isoform_174073_28	chr7	-	173	1	Intergenic	novelGene_10283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	110726986	110726813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_110726800_110727000
Isoform_174075_14	chr7	+	176	1	Intergenic	novelGene_10284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGCCCT	8941	False	NA	NA	False	NA	NA	NA	112092069	112092245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_112092100_112092200
Isoform_174076_4	chr7	+	189	1	Intergenic	novelGene_10038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAGTTTCCTGTTTAAA	1531	False	NA	NA	False	NA	NA	NA	44353290	44353479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_44353300_44353500
Isoform_174077_3	chr7	+	2204	1	NIC	ENSMUSG00000055320.19	novel	2543	12	NA	NA	-51	-77867	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAGTTTAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-43	NA	112278665	112280869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_112278700_112280900
Isoform_174079_21	chr7	-	1274	1	Intergenic	novelGene_10285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	112283206	112281932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_112281900_112283200
Isoform_174081_14	chr7	+	225	1	Intergenic	novelGene_10286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACAGAGTTGATTTCGC	4734	False	NA	NA	False	NA	NA	NA	112366373	112366598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_112366400_112366600
Isoform_174086_13	chr7	-	181	1	Intergenic	novelGene_9757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACAAAACAATCCA	4660	False	NA	NA	False	NA	NA	NA	3285483	3285302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3285300_3285500
Isoform_174088_3	chr7	+	4146	1	ISM	ENSMUSG00000055320.19	ENSMUST00000239442.2	9962	14	223324	16	63010	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCTTATCTGCAACAGT	1837	False	NA	15	True	AATAAA	-21	NA	112501850	112505996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_112501800_112506000
Isoform_174089_3	chr7	+	4055	1	ISM	ENSMUSG00000055320.19	ENSMUST00000239442.2	9962	14	223429	2	63115	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTGTGTTGTTGAGA	1942	False	NA	29	True	AATAAA	-35	NA	112501955	112506010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_112502000_112506000
Isoform_174090_3	chr7	+	3867	1	ISM	ENSMUSG00000055320.19	ENSMUST00000239442.2	9962	14	223598	21	63284	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGCTTTCTTATCTGCA	2111	False	NA	10	True	AATAAA	-16	NA	112502124	112505991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_112502100_112506000
Isoform_174091_3	chr7	+	3799	1	ISM	ENSMUSG00000055320.19	ENSMUST00000239442.2	9962	14	223684	3	63370	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGTCTGTGTTGTTGAG	2197	False	NA	28	True	AATAAA	-34	NA	112502210	112506009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_112502200_112506000
Isoform_174092_3	chr7	+	3642	1	ISM	ENSMUSG00000055320.19	ENSMUST00000239442.2	9962	14	223821	23	63507	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCAGCTTTCTTATCTG	2334	False	NA	8	True	AATAAA	-14	NA	112502347	112505989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_112502300_112506000
Isoform_174093_5	chr7	+	3564	1	ISM	ENSMUSG00000055320.19	ENSMUST00000239442.2	9962	14	223906	16	63592	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCTTATCTGCAACAGT	2419	False	NA	15	True	AATAAA	-21	NA	112502432	112505996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_112502400_112506000
Isoform_174095_5	chr7	+	2850	1	ISM	ENSMUSG00000055320.19	ENSMUST00000239442.2	9962	14	224619	17	64305	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTCTTATCTGCAACAG	3132	False	NA	14	True	AATAAA	-20	NA	112503145	112505995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_112503100_112506000
Isoform_174098_10	chr7	+	2340	1	ISM	ENSMUSG00000055320.19	ENSMUST00000239442.2	9962	14	225130	16	64816	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCTTATCTGCAACAGT	3643	False	NA	15	True	AATAAA	-21	NA	112503656	112505996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_112503700_112506000
Isoform_1741_237	chr10	-	2744	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	130	-1	44	1	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAAGTATTCCCCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	22607216	22579776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
Isoform_174103_30	chr7	+	2253	1	FSM	ENSMUSG00000098132.2	ENSMUST00000182858.2	3496	1	0	1243	0	-1243	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTGACTGTTTACATT	NA	False	NA	NA	False	GATAAA	-15	NA	112553168	112555421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_112553200_112555400
Isoform_174104_3	chr7	+	3501	1	FSM	ENSMUSG00000098132.2	ENSMUST00000182858.2	3496	1	-13	8	-13	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTGATACTTTTTGAG	NA	False	NA	NA	False	AATGAA	-14	NA	112553155	112556656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_112553200_112556700
Isoform_174105_52	chr7	-	188	1	Intergenic	novelGene_10287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAAGTGTGCTGGTTG	1580	False	NA	NA	False	NA	NA	NA	112686935	112686747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_112686700_112686900
Isoform_174106_5	chr7	-	541	1	Intergenic	novelGene_10288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCGCAGGCCCCACGGT	NA	False	NA	NA	False	NA	NA	NA	112820379	112819838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_112819800_112820400
Isoform_174108_3	chr7	-	757	1	Intergenic	novelGene_10289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGCAAAGGATCTGAA	NA	False	NA	NA	False	NA	NA	NA	112859874	112859117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_112859100_112859900
Isoform_174115_3	chr7	-	3348	1	Intergenic	novelGene_10290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113136044	113132696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_113132700_113136000
Isoform_174119_20	chr7	+	177	1	Intergenic	novelGene_10291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACTGAATAACATTG	3534	False	NA	NA	False	NA	NA	NA	113625135	113625312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_113625100_113625300
Isoform_17412_268	chr11	-	3279	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_16	418.075950037789	268	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_174122_18	chr7	-	173	1	Intergenic	novelGene_10292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	113800864	113800691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_113800700_113800900
Isoform_174124_89	chr12	-	176	1	Intergenic	novelGene_2863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	111516392	111516216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111516200_111516400
Isoform_174125_5	chr7	+	344	1	Intergenic	novelGene_10293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAACAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113855034	113855378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_113855000_113855400
Isoform_174130_39	chr7	-	174	1	Intergenic	novelGene_9814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAGCTAGAAAT	NA	False	NA	NA	False	NA	NA	NA	12666332	12666158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_12666200_12666300
Isoform_174131_13	chr7	+	316	1	Intergenic	novelGene_9815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTCCATGATCA	NA	False	NA	NA	False	NA	NA	NA	12668483	12668799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_12668500_12668800
Isoform_174133_3530	chr7	-	1020	1	FSM	ENSMUSG00000086583.4	ENSMUST00000071641.5	1019	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3530	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	114305470	114304450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_114304400_114305500
Isoform_174146_35	chr7	+	178	1	Intergenic	novelGene_10294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115683223	115683401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_115683200_115683400
Isoform_174147_958	chr7	-	177	1	Intergenic	novelGene_10295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	958	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTATAA	NA	False	NA	NA	False	NA	NA	NA	115685474	115685297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_115685300_115685500
Isoform_17415_235	chr11	-	3272	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9028	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_16	418.197765529361	235	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	396	False	NA	-9	True	AATAAA	-19	NA	106615248	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_174153_13	chr7	+	172	1	Intergenic	novelGene_10296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATTAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	115908343	115908515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_115908300_115908500
Isoform_174155_5	chr7	-	172	1	Intergenic	novelGene_10297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGACAAGAATTATA	NA	False	NA	NA	False	NA	NA	NA	115925168	115924996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_115925000_115925200
Isoform_174157_80	chr7	+	177	1	Intergenic	novelGene_10298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115926971	115927148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_115927000_115927100
Isoform_174158_3	chr7	-	1940	2	NNC	ENSMUSG00000090862.4	novel	589	6	NA	NA	1677	1966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115930740	115928773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_115930053_115930079
Isoform_174159_11	chr7	-	177	1	Antisense	novelGene_ENSMUSG00000108738.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	115935431	115935254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_115935300_115935400
Isoform_174160_94	chr7	-	176	1	Intergenic	novelGene_10299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	115953687	115953511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_115953500_115953700
Isoform_174161_224	chrX	+	177	1	Intergenic	novelGene_12003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	71631926	71632103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_71631900_71632100
Isoform_174163_13	chr7	+	184	1	Intergenic	novelGene_9816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGACTGTCT	NA	False	NA	NA	False	NA	NA	NA	12687804	12687988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_12687800_12688000
Isoform_174165_55	chr7	-	159	1	Intergenic	novelGene_10301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATCTTTAAA	9057	False	NA	NA	False	NA	NA	NA	116022050	116021891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_116021900_116022000
Isoform_174166_4	chr7	+	777	1	FSM	ENSMUSG00000108461.2	ENSMUST00000206201.2	750	1	-28	1	-28	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCTGGATGAAGTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	116042781	116043558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_116042800_116043600
Isoform_174170_82	chr7	+	161	1	Intergenic	novelGene_9817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGCTAATGGAAA	NA	False	NA	NA	False	NA	NA	NA	12693894	12694055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_12693900_12694100
Isoform_174171_62	chr7	-	176	1	Intergenic	novelGene_10302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGATTCCACT	5500	False	NA	NA	False	NA	NA	NA	116184147	116183971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_116184000_116184100
Isoform_174172_4	chr7	-	342	1	Intergenic	novelGene_10303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATAATAAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	116310802	116310460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_116310500_116310800
Isoform_174175_545	chr7	-	1436	1	FSM	ENSMUSG00000107383.2	ENSMUST00000201488.2	1342	1	7	-101	7	101	mono-exon	FALSE	NA	NA	NA	NA	NA	545	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGTGAACTTGAAGTAT	NA	False	NA	NA	False	ATTAAA	-39	NA	116425079	116423643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_116423600_116425100
Isoform_17419_156	chr11	-	3316	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_16	423.912869695826	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	392	False	NA	-9	True	AATAAA	-19	NA	106615252	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_174190_31	chr7	-	176	1	Intergenic	novelGene_10304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTTTAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	117280179	117280003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_117280000_117280200
Isoform_1742_55	chr10	-	2769	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	105	-1	19	1	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAAGTATTCCCCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	22607241	22579776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
Isoform_17420_153	chr11	-	3276	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_16	435.971934123918	153	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_174211_19	chr7	+	5032	1	Antisense	novelGene_ENSMUSG00000030655.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117741190	117746222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_117741200_117746200
Isoform_174213_25	chr7	+	185	1	Intergenic	novelGene_10305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGATGATGGTGA	NA	False	NA	NA	False	NA	NA	NA	117825843	117826028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_117825800_117826000
Isoform_174214_27	chr7	+	176	1	Intergenic	novelGene_10306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAATTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	117834512	117834688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_117834500_117834700
Isoform_174215_227	chr7	+	169	1	Intergenic	novelGene_10307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117839993	117840162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_117840000_117840200
Isoform_174216_5	chr7	-	2691	1	NIC	ENSMUSG00000030655.16	novel	1516	10	NA	NA	16	-37199	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117842877	117840186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_117840200_117842900
Isoform_174218_4	chr7	+	154	1	Intergenic	novelGene_10308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGGTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	117865660	117865814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_117865700_117865800
Isoform_174219_14	chr7	-	180	1	Intergenic	novelGene_10309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGATATTTACTG	NA	False	NA	NA	False	NA	NA	NA	117948460	117948280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_117948300_117948500
Isoform_174220_11	chr7	+	176	1	Intergenic	novelGene_10310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACATGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	118035012	118035188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_118035000_118035200
Isoform_174221_112	chr9	-	176	1	Intergenic	novelGene_11694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	109956449	109956273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_109956300_109956400
Isoform_174223_4	chr7	+	181	1	Intergenic	novelGene_10311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTCTGAACTAG	NA	False	NA	NA	False	NA	NA	NA	118279317	118279498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_118279300_118279500
Isoform_174224_15	chr7	+	184	1	Intergenic	novelGene_10312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTTTGAGCTGCACT	NA	False	NA	NA	False	NA	NA	NA	118302098	118302282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_118302100_118302300
Isoform_174225_3	chr7	-	176	1	Intergenic	novelGene_10313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATCACAAAACG	2610	False	NA	NA	False	NA	NA	NA	118324307	118324131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_118324100_118324300
Isoform_174226_8	chr7	-	175	1	Intergenic	novelGene_10314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACACTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	118342662	118342487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_118342500_118342700
Isoform_174227_224	chr7	+	180	1	Intergenic	novelGene_9818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	12720295	12720475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_12720300_12720500
Isoform_174238_6	chr7	+	2886	1	FSM	ENSMUSG00000073856.12	ENSMUST00000208658.2	2891	1	2	3	2	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGTAGTGGTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	118454976	118457862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_118455000_118457900
Isoform_174239_28	chr7	+	175	1	Intergenic	novelGene_9758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTTTTTAATTTAA	248	False	NA	NA	False	NA	NA	NA	3293408	3293583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3293400_3293600
Isoform_174244_1976	chr7	+	2309	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	-213	-1124	-11	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1976	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119339137	119341446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_119339100_119341400
Isoform_174260_11	chr7	-	1357	1	Antisense	novelGene_ENSMUSG00000100153.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTACATATAAGATCCAAA	NA	False	NA	NA	False	NA	NA	NA	119341446	119340089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_119340100_119341400
Isoform_174265_4	chr7	+	180	1	Intergenic	novelGene_10317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGCTGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119344552	119344732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_119344600_119344700
Isoform_174267_3	chr7	-	176	1	Intergenic	novelGene_10318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGACAGGGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	119795693	119795517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_119795500_119795700
Isoform_174268_104	chr13	-	176	1	Intergenic	novelGene_3057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	54775668	54775492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_54775500_54775700
Isoform_174269_45	chr7	+	175	1	Intergenic	novelGene_10319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAAGCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	120228112	120228287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_120228100_120228300
Isoform_174271_5	chr7	+	222	1	Intergenic	novelGene_10320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTATACATAGGTGGTA	NA	False	NA	48	True	NA	NA	NA	120293542	120293764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_120293500_120293800
Isoform_174276_5	chr7	-	173	1	Intergenic	novelGene_10321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAGTGGGAGGGG	NA	False	NA	NA	False	NA	NA	NA	120403461	120403288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_120403300_120403500
Isoform_174280_110	chr7	+	179	1	Intergenic	novelGene_10322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAACTGCCCTCCA	16	False	NA	NA	False	NA	NA	NA	120553083	120553262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_120553100_120553300
Isoform_174281_3	chr7	+	217	1	Intergenic	novelGene_10323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AAGAAA	-22	NA	120603558	120603775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_120603600_120603800
Isoform_174282_3	chr7	-	3189	1	Antisense	novelGene_ENSMUSG00000108954.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCCCAC	NA	False	NA	NA	False	AATAAA	-25	NA	120656143	120652954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_120653000_120656100
Isoform_174283_7	chr7	+	177	1	Intergenic	novelGene_10324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACTGAAC	NA	False	NA	NA	False	NA	NA	NA	120709339	120709516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_120709300_120709500
Isoform_174288_19	chr7	+	174	1	Intergenic	novelGene_10325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAAATCCAT	NA	False	NA	NA	False	NA	NA	NA	121625662	121625836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_121625700_121625800
Isoform_174289_3	chr7	-	173	1	Intergenic	novelGene_10326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAGATAAGAG	NA	False	NA	NA	False	NA	NA	NA	121635418	121635245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_121635200_121635400
Isoform_174291_9	chr7	+	148	1	Intergenic	novelGene_10327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTTTGAACCCTAACA	NA	False	NA	NA	False	NA	NA	NA	121661252	121661400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_121661300_121661400
Isoform_17430_49	chr11	-	3215	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9013	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	494.225031966434	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	411	False	NA	-9	True	AATAAA	-19	NA	106615233	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_174309_17	chr7	+	158	1	Antisense	novelGene_ENSMUSG00000030869.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	121692532	121692690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_121692500_121692700
Isoform_174311_6	chr7	-	209	1	Intergenic	novelGene_9759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACTTCCTAAATGTCT	2791	False	NA	NA	False	AATAGA	-14	NA	3294275	3294066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3294100_3294300
Isoform_174312_14	chr7	-	159	1	Intergenic	novelGene_9819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAATAAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	12749843	12749684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_12749700_12749800
Isoform_174316_30	chr7	-	2091	1	FSM	ENSMUSG00000044702.14	ENSMUST00000205352.2	2145	1	47	7	8	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121732161	121730070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_121730100_121732200
Isoform_174319_236	chr7	-	171	1	Intergenic	novelGene_10328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	121746754	121746583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_121746600_121746800
Isoform_174320_5	chr7	+	158	1	Intergenic	novelGene_10329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATGT	NA	False	NA	NA	False	NA	NA	NA	121755937	121756095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_121755900_121756100
Isoform_174321_4	chr7	+	172	1	Intergenic	novelGene_10330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGGCAATGTAATCTGA	NA	False	NA	NA	False	NA	NA	NA	121789651	121789823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_121789700_121789800
Isoform_174324_7	chr7	-	174	1	Intergenic	novelGene_10331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	122533889	122533715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_122533700_122533900
Isoform_174328_9	chr7	+	2941	1	NIC	ENSMUSG00000030779.17	novel	478	4	NA	NA	-627	-3131	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	6939	False	NA	NA	False	NA	NA	NA	122569159	122572100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_122569200_122572100
Isoform_174329_3	chr7	+	1228	1	NIC	ENSMUSG00000030779.17	novel	478	4	NA	NA	-670	-4887	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGTAAGAGGCACACG	6896	False	NA	NA	False	NA	NA	NA	122569116	122570344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_122569100_122570300
Isoform_174333_13	chr7	-	173	1	Intergenic	novelGene_10333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGAGCATTTGTTG	NA	False	NA	NA	False	NA	NA	NA	122614907	122614734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_122614700_122614900
Isoform_174334_3	chr1	+	176	1	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	34353166	34353342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_34353200_34353300
Isoform_174336_3	chr7	-	170	1	Intergenic	novelGene_10334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	122694079	122693909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_122693900_122694100
Isoform_174341_93	chr7	+	169	1	Intergenic	novelGene_10335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATAGTGACAG	NA	False	NA	NA	False	NA	NA	NA	122797214	122797383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_122797200_122797400
Isoform_174342_10	chr7	-	175	1	Intergenic	novelGene_10336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	122836949	122836774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_122836800_122836900
Isoform_174347_14	chr7	-	1028	1	NIC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	-31	-13452	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	125306880	125305852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_125305900_125306900
Isoform_174348_4	chr7	+	175	1	Intergenic	novelGene_9760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAGATTTATA	2390	False	NA	NA	False	NA	NA	NA	3295550	3295725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3295600_3295700
Isoform_174349_6	chr7	+	177	1	Intergenic	novelGene_10338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	125672642	125672819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_125672600_125672800
Isoform_174350_70	chr7	+	179	1	Intergenic	novelGene_10339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAGGA	NA	False	NA	NA	False	NA	NA	NA	125675862	125676041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_125675900_125676000
Isoform_174352_3	chr7	+	178	1	Intergenic	novelGene_10340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAATAATAAATTGGCA	1696	False	NA	NA	False	NA	NA	NA	125755429	125755607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_125755400_125755600
Isoform_174353_14	chr7	+	172	1	Intergenic	novelGene_10341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATCTTAAAAAAAAAAAAAA	6878	False	NA	NA	False	NA	NA	NA	125760611	125760783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_125760600_125760800
Isoform_174354_9	chr7	+	172	1	Intergenic	novelGene_10342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGGAAAAG	8014	False	NA	NA	False	NA	NA	NA	125761747	125761919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_125761700_125761900
Isoform_174355_304	chr7	-	178	1	Intergenic	novelGene_10343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	125791367	125791189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_125791200_125791400
Isoform_174357_6	chr7	-	171	1	Intergenic	novelGene_10344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAACAAAAACC	NA	False	NA	NA	False	NA	NA	NA	125839212	125839041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_125839000_125839200
Isoform_174359_5	chr7	+	162	1	Intergenic	novelGene_10345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTTAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	125840283	125840445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_125840300_125840400
Isoform_174360_6	chr4	+	177	1	Intergenic	novelGene_7576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51782153	51782330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_51782200_51782300
Isoform_174368_13	chr7	-	187	1	Intergenic	novelGene_10346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	125915557	125915370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_125915400_125915600
Isoform_174369_17	chr7	+	165	1	Intergenic	novelGene_10347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGTGAGTGACTGG	NA	False	NA	NA	False	NA	NA	NA	125920960	125921125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_125921000_125921100
Isoform_174382_38	chr17	-	176	1	Intergenic	novelGene_4977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	41057691	41057515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_41057500_41057700
Isoform_174383_5	chr7	-	168	1	Intergenic	novelGene_10348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	126022989	126022821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_126022800_126023000
Isoform_174385_88	chr7	+	227	1	Intergenic	novelGene_10349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	126076353	126076580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126076400_126076600
Isoform_174387_17	chr7	+	215	1	Intergenic	novelGene_10350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTTTTAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	126082902	126083117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126082900_126083100
Isoform_174388_5	chr7	+	171	1	Intergenic	novelGene_10351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	126085668	126085839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126085700_126085800
Isoform_174396_43	chr12	+	177	1	Intergenic	novelGene_2514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36064191	36064368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_36064200_36064400
Isoform_174397_8	chr7	-	175	1	Intergenic	novelGene_10353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	126125781	126125606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_126125600_126125800
Isoform_174398_5	chr7	+	733	1	Antisense	novelGene_ENSMUSG00000030738.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCCAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126165121	126165854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_126165100_126165900
Isoform_174404_201	chr7	-	178	1	Intergenic	novelGene_10355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	126242548	126242370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_126242400_126242500
Isoform_174406_3	chr7	+	274	1	Intergenic	novelGene_10356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAACAATAATAAAAAC	NA	False	NA	NA	False	NA	NA	NA	126243769	126244043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126243800_126244000
Isoform_174407_10	chr7	-	663	1	FSM	ENSMUSG00000066175.3	ENSMUST00000084587.2	348	1	-3	-312	-3	312	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTAGCTACATCTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	126248745	126248082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126248100_126248700
Isoform_174410_10	chr7	+	202	1	Intergenic	novelGene_10357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATATTAATCCTACCTA	1496	False	NA	NA	False	NA	NA	NA	126325468	126325670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126325500_126325700
Isoform_174412_29	chr7	-	158	1	Intergenic	novelGene_10358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAATTTAA	9672	False	NA	NA	False	NA	NA	NA	126336032	126335874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_126335900_126336000
Isoform_174413_7	chr7	-	173	1	Intergenic	novelGene_10359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAAAGTG	8881	False	NA	NA	False	NA	NA	NA	126336823	126336650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_126336600_126336800
Isoform_174414_14	chr18	+	176	1	Intergenic	novelGene_5425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	5988	False	NA	NA	False	NA	NA	NA	47062050	47062226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_47062000_47062200
Isoform_174415_4	chr7	+	154	1	Intergenic	novelGene_10360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATATAAAATAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	126347310	126347464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126347300_126347500
Isoform_174417_16	chr7	-	176	1	Intergenic	novelGene_10361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGATGTATTAGT	6370	False	NA	NA	False	NA	NA	NA	126349591	126349415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_126349400_126349600
Isoform_174427_3	chr7	+	255	1	Intergenic	novelGene_10362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTGAATGTATGTGAAT	1064	False	NA	NA	False	AATAAA	-12	NA	126596293	126596548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126596300_126596500
Isoform_174436_17	chr7	-	177	1	Intergenic	novelGene_10363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAACATTTAATGT	NA	False	NA	NA	False	NA	NA	NA	126661944	126661767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_126661800_126661900
Isoform_174439_3	chr7	+	174	1	Intergenic	novelGene_10365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	126737834	126738008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126737800_126738000
Isoform_174440_37	chr7	-	179	1	Intergenic	novelGene_10366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	126759090	126758911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_126758900_126759100
Isoform_174441_4	chr7	-	171	1	FSM	ENSMUSG00000108717.2	ENSMUST00000206225.2	1247	1	-164	1240	-164	-1240	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGTGTACTAAG	4273	False	NA	NA	False	NA	NA	NA	126772541	126772370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126772400_126772500
Isoform_174448_32	chr18	+	176	1	Intergenic	novelGene_5487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	67758243	67758419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_67758200_67758400
Isoform_174450_13	chr7	+	3653	1	Antisense	novelGene_ENSMUSG00000042492.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1942	False	NA	NA	False	NA	NA	NA	126797210	126800863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_126797200_126800900
Isoform_174451_12	chr7	+	190	1	Intergenic	novelGene_10367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAGTGATTAAATTT	6815	False	NA	NA	False	NA	NA	NA	126820822	126821012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126820800_126821000
Isoform_174453_10	chr7	+	856	1	FSM	ENSMUSG00000045598.11	ENSMUST00000205367.2	827	1	-28	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	8313	False	NA	NA	False	NA	NA	NA	126832437	126833293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_126832400_126833300
Isoform_174466_3894	chr7	-	2176	1	FSM	ENSMUSG00000049091.8	ENSMUST00000082428.6	2177	1	-2	3	-2	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3894	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGCTAATGTTTG	2839	False	NA	-11	True	AATAAA	-43	NA	126873229	126871053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126871100_126873200
Isoform_174467_74	chr7	-	2219	1	FSM	ENSMUSG00000049091.8	ENSMUST00000082428.6	2177	1	-45	3	-45	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGCTAATGTTTG	2796	False	NA	-11	True	AATAAA	-43	NA	126873272	126871053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_126871100_126873300
Isoform_174488_160	chr14	+	176	1	NIC	ENSMUSG00000098088.2	novel	352	2	NA	NA	754	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6006	False	NA	NA	False	NA	NA	NA	61867686	61867862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_61867700_61867900
Isoform_174489_118	chr7	+	201	1	Genic_Genomic	ENSMUSG00000108483.2	novel	NA	NA	NA	NA	4800	30	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACCAC	NA	False	NA	NA	False	NA	NA	NA	127038393	127038594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_+_127038400_127038600
Isoform_174491_3	chr7	-	1653	1	NIC	ENSMUSG00000048921.12	novel	3621	3	NA	NA	19	-3732	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAGAA	4376	False	NA	NA	False	NA	NA	NA	127048311	127046658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127046700_127048300
Isoform_174493_14	chr7	+	179	1	Intergenic	novelGene_10370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6127	False	NA	NA	False	NA	NA	NA	127057844	127058023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127057800_127058000
Isoform_174494_8	chr7	-	200	1	Intergenic	novelGene_10371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTGGGGCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	127058598	127058398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127058400_127058600
Isoform_174496_16	chr7	+	228	1	Intergenic	novelGene_10372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTCCCTCCTTCCCATC	NA	False	NA	NA	False	NA	NA	NA	127066094	127066322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127066100_127066300
Isoform_174499_139	chr15	+	177	1	Intergenic	novelGene_3872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50413668	50413845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_50413700_50413800
Isoform_1745_9	chr10	-	2826	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	45	2	-41	-2	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTTTAAGTATTCCCC	NA	False	NA	-9	True	AATAAA	-19	NA	22607301	22579779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
Isoform_174500_6	chr7	-	3026	1	FSM	ENSMUSG00000101225.2	ENSMUST00000185351.2	2432	1	-33	-561	-33	561	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	9968	False	NA	NA	False	NA	NA	NA	127112074	127109048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127109000_127112100
Isoform_174501_12	chr7	-	1101	1	FSM	ENSMUSG00000101225.2	ENSMUST00000185351.2	2432	1	471	860	471	-860	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGGCTGGGTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	127111570	127110469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127110500_127111600
Isoform_174502_9	chr7	-	1565	1	FSM	ENSMUSG00000101225.2	ENSMUST00000185351.2	2432	1	7	860	7	-860	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGGCTGGGTGGTGGT	10008	False	NA	NA	False	NA	NA	NA	127112034	127110469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127110500_127112000
Isoform_174503_3	chr7	+	177	1	Intergenic	novelGene_10374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAATCAATCAA	NA	False	NA	NA	False	NA	NA	NA	127118319	127118496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127118300_127118500
Isoform_174506_3	chr7	+	1534	1	ISM	ENSMUSG00000107023.3	ENSMUST00000189629.5	12746	31	40103	5834	-398	-1984	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTAAGGAGGCTTCTGA	NA	False	NA	NA	False	AATAAA	-21	NA	127158858	127160392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_127158900_127160400
Isoform_174508_22	chr7	-	157	1	Intergenic	novelGene_10375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	127167994	127167837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127167800_127168000
Isoform_174509_16	chr7	-	5255	1	FSM	ENSMUSG00000099579.2	ENSMUST00000191038.2	546	1	524	-5233	524	5233	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7234	False	NA	NA	False	NA	NA	NA	127203093	127197838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127197800_127203100
Isoform_174513_6	chr7	-	296	1	Intergenic	novelGene_10376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	127237411	127237115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127237100_127237400
Isoform_174517_10	chr7	+	179	1	Intergenic	novelGene_10377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	127257691	127257870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127257700_127257900
Isoform_174519_46	chr7	-	178	1	Intergenic	novelGene_9821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGGCAGTGGCTGG	NA	False	NA	NA	False	NA	NA	NA	14043769	14043591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_14043600_14043800
Isoform_17452_322	chr11	-	3256	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_15	360.626097533473	322	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_174520_20	chr7	+	177	1	Antisense	novelGene_ENSMUSG00000060034.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	127317733	127317910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_127317700_127317900
Isoform_174521_3	chr7	-	338	1	Intergenic	novelGene_10378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTGATGGTGCACACC	NA	False	NA	NA	False	NA	NA	NA	127319644	127319306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127319300_127319600
Isoform_174523_80	chr7	-	176	1	Intergenic	novelGene_10379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAAGAAAAG	6562	False	NA	NA	False	NA	NA	NA	127339033	127338857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127338900_127339000
Isoform_174528_3	chr7	-	1714	1	Antisense	novelGene_ENSMUSG00000042308.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTCAGTGGTTAAAATC	NA	False	NA	NA	False	NA	NA	NA	127376947	127375233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_127375200_127376900
Isoform_174529_10	chr7	-	175	1	Intergenic	novelGene_9822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTGAAACTCTGCT	NA	False	NA	NA	False	NA	NA	NA	14279201	14279026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_14279000_14279200
Isoform_174530_47	chr7	-	215	1	Intergenic	novelGene_10380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAATACA	NA	False	NA	NA	False	NA	NA	NA	127428110	127427895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127427900_127428100
Isoform_174532_8	chr7	-	174	1	Intergenic	novelGene_10381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACTGGAGAAGCTA	NA	False	NA	NA	False	NA	NA	NA	127429548	127429374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127429400_127429500
Isoform_174533_149	chr7	-	176	1	Intergenic	novelGene_10382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	127437364	127437188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127437200_127437400
Isoform_174535_39	chr7	-	176	1	Intergenic	novelGene_10384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTTAGATAAAAGGC	9940	False	NA	NA	False	NA	NA	NA	127439197	127439021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127439000_127439200
Isoform_174536_48	chr7	-	180	1	Intergenic	novelGene_10385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTTTAGCT	NA	False	NA	NA	False	NA	NA	NA	127451697	127451517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127451500_127451700
Isoform_174541_33	chr7	-	174	1	Antisense	novelGene_ENSMUSG00000030801.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAAATAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127513602	127513428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_127513400_127513600
Isoform_174542_5	chr7	-	2885	1	NIC	ENSMUSG00000070371.12	novel	3028	15	NA	NA	-3	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534694	127531809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_127531800_127534700
Isoform_174545_8	chr2	+	177	1	Intergenic	novelGene_6045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	26514468	26514645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_26514500_26514600
Isoform_174546_11	chr7	+	176	1	Intergenic	novelGene_10386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	330	False	NA	NA	False	NA	NA	NA	127541644	127541820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127541600_127541800
Isoform_174548_19	chr7	+	177	1	Intergenic	novelGene_10387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127554751	127554928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127554800_127554900
Isoform_174549_49	chr7	-	188	1	Intergenic	novelGene_10388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGATATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	127565341	127565153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127565200_127565300
Isoform_17455_173	chr11	-	3244	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_15	360.787927859136	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_174553_161	chr7	+	177	1	Intergenic	novelGene_9761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTG	886	False	NA	NA	False	NA	NA	NA	3304590	3304767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3304600_3304800
Isoform_174555_15	chr7	-	165	1	Intergenic	novelGene_10389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAGCCATGAC	NA	False	NA	NA	False	NA	NA	NA	127654589	127654424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127654400_127654600
Isoform_174557_7	chr7	-	3614	1	FSM	ENSMUSG00000062944.5	ENSMUST00000078816.5	3574	1	-20	-20	-20	20	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTATTTGGTCTTTGGCTC	5253	False	NA	NA	False	AATAAA	-34	NA	127837223	127833609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_127833600_127837200
Isoform_174558_10	chr6	+	175	1	Intergenic	novelGene_9691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134736618	134736793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_134736600_134736800
Isoform_174559_3	chr7	+	179	1	Intergenic	novelGene_10390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGCTCAA	8741	False	NA	NA	False	NA	NA	NA	127997834	127998013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127997800_127998000
Isoform_174560_34	chr7	+	219	1	Intergenic	novelGene_10391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGGGCGTGGTGGCACA	7386	False	NA	NA	False	NA	NA	NA	128091292	128091511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_128091300_128091500
Isoform_174562_5	chr7	-	158	1	Intergenic	novelGene_10392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAATAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128172535	128172377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_128172400_128172500
Isoform_174564_27	chr7	+	174	1	Intergenic	novelGene_10394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTGGCAG	NA	False	NA	NA	False	NA	NA	NA	128285737	128285911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_128285700_128285900
Isoform_174565_7	chr7	+	732	1	Antisense	novelGene_ENSMUSG00000048170.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128298576	128299308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_128298600_128299300
Isoform_174567_9	chr7	+	4093	1	Intergenic	novelGene_10395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	128331457	128335550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_128331500_128335600
Isoform_174568_5	chr7	+	170	1	Intergenic	novelGene_10396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGGCCGGAGGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	128339270	128339440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_128339300_128339400
Isoform_174569_4	chr7	+	1672	1	Intergenic	novelGene_10397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGCATTCTCCCGGAT	NA	False	NA	NA	False	NA	NA	NA	128339709	128341381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_128339700_128341400
Isoform_174572_4	chr7	+	177	1	Intergenic	novelGene_10398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAGAAGATTCA	NA	False	NA	NA	False	NA	NA	NA	129711859	129712036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_129711900_129712000
Isoform_174573_6	chr7	-	177	1	Intergenic	novelGene_10399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAGAGAATGATAA	NA	False	NA	NA	False	NA	NA	NA	129759803	129759626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_129759600_129759800
Isoform_174574_28	chr7	-	193	1	Intergenic	novelGene_10400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129781974	129781781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_129781800_129782000
Isoform_174579_8	chr7	+	1071	1	Intergenic	novelGene_10401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAATACATTTC	NA	False	NA	NA	False	NA	NA	NA	130093426	130094497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_130093400_130094500
Isoform_174580_9	chr7	-	177	1	Intergenic	novelGene_10402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATCCCAGC	NA	False	NA	NA	False	NA	NA	NA	130108187	130108010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_130108000_130108200
Isoform_174581_15	chr7	-	167	1	Intergenic	novelGene_10403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAAAAAAGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	130123836	130123669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_130123700_130123800
Isoform_174583_35	chr7	-	174	1	Intergenic	novelGene_10404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAATCTAAAACT	NA	False	NA	NA	False	NA	NA	NA	130153258	130153084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_130153100_130153300
Isoform_174585_19	chr7	-	1931	1	Antisense	novelGene_ENSMUSG00000030852.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGTAACTCAGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	130266637	130264706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_130264700_130266600
Isoform_174587_20	chr10	+	178	1	Intergenic	novelGene_840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATATTA	NA	False	NA	NA	False	NA	NA	NA	49453857	49454035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_49453900_49454000
Isoform_17459_236	chr11	-	3294	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_15	368.337888357959	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_174590_59	chr16	+	181	1	Intergenic	novelGene_4313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	13691480	13691661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_13691500_13691700
Isoform_174595_91	chr7	-	173	1	Intergenic	novelGene_10407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	130547463	130547290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_130547300_130547500
Isoform_174596_8	chr7	+	672	1	FSM	ENSMUSG00000063179.14	ENSMUST00000207419.2	675	1	0	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	AAGAAA	-7	NA	130972884	130973556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_130972900_130973600
Isoform_174597_19	chr7	-	174	1	Intergenic	novelGene_9823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCCCAACCCAAT	NA	False	NA	NA	False	NA	NA	NA	15366433	15366259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_15366300_15366400
Isoform_174606_6	chr7	-	169	1	Intergenic	novelGene_10408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	131256816	131256647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_131256600_131256800
Isoform_174609_41	chr7	+	195	1	Intergenic	novelGene_10409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAGTAAAATTT	NA	False	NA	NA	False	AATAAA	-8	NA	132088746	132088941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_132088700_132088900
Isoform_174610_47	chr7	+	178	1	Intergenic	novelGene_10410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTTAAAAAAAACACAAA	NA	False	NA	3	True	NA	NA	NA	132143560	132143738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_132143600_132143700
Isoform_174611_7	chr7	+	175	1	Intergenic	novelGene_10411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTATAC	NA	False	NA	NA	False	NA	NA	NA	132176694	132176869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_132176700_132176900
Isoform_174612_71	chr7	+	181	1	Intergenic	novelGene_10412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCAAATCC	NA	False	NA	NA	False	NA	NA	NA	132189695	132189876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_132189700_132189900
Isoform_17462_186	chr11	-	3252	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9022	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_15	384.021504027516	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	402	False	NA	-9	True	AATAAA	-19	NA	106615242	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_174626_3	chr7	+	176	1	Intergenic	novelGene_10413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	132327419	132327595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_132327400_132327600
Isoform_174628_18	chr7	+	236	1	Intergenic	novelGene_9824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCAGTGATGTCACCTA	NA	False	NA	NA	False	AAGAAA	-43	NA	15572588	15572824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_15572600_15572800
Isoform_174630_143	chr7	-	176	1	Intergenic	novelGene_10414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	132460189	132460013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_132460000_132460200
Isoform_174632_10	chr7	+	3352	1	FSM	ENSMUSG00000030965.20	ENSMUST00000210077.2	1778	1	5	-1579	3	1579	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGAGTCATATGTCTC	NA	False	NA	NA	False	NA	NA	NA	132460968	132464320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_132461000_132464300
Isoform_174633_7	chr7	-	5530	1	Antisense	novelGene_ENSMUSG00000030965.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAACAC	NA	False	NA	NA	False	NA	NA	NA	132469613	132464083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_132464100_132469600
Isoform_174647_10	chr7	+	175	1	Intergenic	novelGene_9762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAAAAAAAAGAGTG	437	False	NA	NA	False	NA	NA	NA	3309391	3309566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3309400_3309600
Isoform_17465_57	chr11	-	3251	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_15	413.292385068435	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615208
Isoform_174650_21	chr7	+	3882	1	Intergenic	novelGene_10415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8908	False	NA	NA	False	NA	NA	NA	132673659	132677541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_132673700_132677500
Isoform_174655_6	chr7	-	166	1	Intergenic	novelGene_10416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAACTGCAAGAA	NA	False	NA	NA	False	NA	NA	NA	132749974	132749808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_132749800_132750000
Isoform_174656_7	chr7	+	173	1	Intergenic	novelGene_10417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	132751787	132751960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_132751800_132752000
Isoform_174657_13	chr7	+	175	1	Intergenic	novelGene_9825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAACAA	NA	False	NA	NA	False	NA	NA	NA	15622499	15622674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_15622500_15622700
Isoform_174658_10	chr7	+	179	1	Intergenic	novelGene_9826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGAAGGTGTA	NA	False	NA	NA	False	NA	NA	NA	15625594	15625773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_15625600_15625800
Isoform_174660_8	chr7	-	4042	1	Intergenic	novelGene_10418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133620558	133616516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_133616500_133620600
Isoform_174662_57	chr7	+	196	1	Intergenic	novelGene_10420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGTGAATC	7715	False	NA	NA	False	NA	NA	NA	135404061	135404257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_135404100_135404300
Isoform_174665_6	chr7	-	177	1	Intergenic	novelGene_10421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	136475483	136475306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_136475300_136475500
Isoform_174666_15	chr7	-	180	1	Intergenic	novelGene_9763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	3312927	3312747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3312700_3312900
Isoform_174667_4	chr7	+	174	1	Intergenic	novelGene_10422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAACAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	137009825	137009999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_137009800_137010000
Isoform_174670_5	chr7	-	166	1	Intergenic	novelGene_10423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137097887	137097721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_137097700_137097900
Isoform_174674_4	chr7	+	171	1	Intergenic	novelGene_10424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAATAAAAAAAGGAGAT	NA	False	NA	NA	False	NA	NA	NA	138401575	138401746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_138401600_138401700
Isoform_174677_33	chr7	-	178	1	Intergenic	novelGene_10425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	138507469	138507291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_138507300_138507500
Isoform_174678_6	chr7	-	175	1	Intergenic	novelGene_10426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAATCCAGCAAATG	NA	False	NA	NA	False	NA	NA	NA	138575527	138575352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_138575400_138575500
Isoform_174680_3	chr7	+	177	1	Intergenic	novelGene_10427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	138939295	138939472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_138939300_138939500
Isoform_174681_35	chr7	-	177	1	Intergenic	novelGene_9820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	13110399	13110222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_13110200_13110400
Isoform_174682_24	chr7	+	175	1	Intergenic	novelGene_10429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGAATGTG	NA	False	NA	NA	False	NA	NA	NA	138959102	138959277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_138959100_138959300
Isoform_174683_117	chr7	+	180	1	Intergenic	novelGene_10430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTGGCAT	8482	False	NA	NA	False	NA	NA	NA	139078998	139079178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_139079000_139079200
Isoform_174684_3	chr7	-	173	1	Intergenic	novelGene_10431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAAAATGTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	139119753	139119580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_139119600_139119800
Isoform_174687_4	chr7	-	158	1	Intergenic	novelGene_10432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAATCTCTGCTGAAA	NA	False	NA	NA	False	NA	NA	NA	139427030	139426872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_139426900_139427000
Isoform_174688_39	chr7	+	1290	1	NIC	ENSMUSG00000047751.10	novel	1227	2	NA	NA	33	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTGAATGAATTCGGA	NA	False	NA	NA	False	AATAAA	-19	NA	139523734	139525024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_139523700_139525000
Isoform_174690_5	chr7	+	2338	1	NIC	ENSMUSG00000025470.12	novel	878	5	NA	NA	6	1129	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTAAAAACCTTAAAG	NA	False	NA	NA	False	NA	NA	NA	139616330	139618668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_139616300_139618700
Isoform_174691_41	chr7	+	177	1	Intergenic	novelGene_10433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAATTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	139632550	139632727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_139632600_139632700
Isoform_174693_10	chr7	-	179	1	Intergenic	novelGene_10434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCATACGTTA	4415	False	NA	NA	False	NA	NA	NA	139655764	139655585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_139655600_139655800
Isoform_174696_35	chr7	+	224	1	Antisense	novelGene_ENSMUSG00000025465.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAACTTTTGATCTTT	NA	False	NA	NA	False	NA	NA	NA	139693451	139693675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_139693500_139693700
Isoform_174700_5	chr7	+	177	1	ISM	ENSMUSG00000025479.10	ENSMUST00000026552.9	1833	9	11060	6	10318	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCCAAGCATATGG	1145	False	NA	NA	False	NA	NA	NA	140354711	140354888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_140354700_140354900
Isoform_174701_3	chr7	-	2873	1	FSM	ENSMUSG00000025484.10	ENSMUST00000210157.2	1882	1	-13	-978	1	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTATGAAGTTCCGTGCC	NA	False	NA	-27	True	CATAAA	-14	NA	140436196	140433323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140433300_140436200
Isoform_174702_9	chr7	-	1915	1	FSM	ENSMUSG00000025484.10	ENSMUST00000210157.2	1882	1	-30	-3	-16	3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	140436213	140434298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140434300_140436200
Isoform_174703_11	chr7	-	766	1	FSM	ENSMUSG00000025486.18	ENSMUST00000210398.2	1223	1	458	-1	-11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	140461751	140460985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140461000_140461800
Isoform_174705_6	chr7	+	1194	1	NIC	ENSMUSG00000062031.14	novel	2748	12	NA	NA	11	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAAAAAACATG	NA	False	NA	NA	False	NA	NA	NA	140521504	140522698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_140521500_140522700
Isoform_174709_5	chr7	+	171	1	Intergenic	novelGene_10435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAGATTCTAATCTGG	NA	False	NA	NA	False	NA	NA	NA	140545994	140546165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140546000_140546200
Isoform_174712_5	chr7	+	157	1	Intergenic	novelGene_10436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	140564194	140564351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140564200_140564400
Isoform_174714_6	chr7	+	184	1	Intergenic	novelGene_10437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTTTTTAAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	140607191	140607375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140607200_140607400
Isoform_174716_16	chr7	-	177	1	Intergenic	novelGene_10438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGAACTACT	NA	False	NA	NA	False	NA	NA	NA	140634358	140634181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_140634200_140634400
Isoform_174719_6	chr7	+	184	1	Intergenic	novelGene_10440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACACAGAAA	NA	False	NA	NA	False	NA	NA	NA	140685521	140685705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140685500_140685700
Isoform_174722_7	chr7	+	163	1	Intergenic	novelGene_10441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAAAATAAA	4102	False	NA	NA	False	NA	NA	NA	140708490	140708653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140708500_140708700
Isoform_174723_4	chr7	-	2324	1	Antisense	novelGene_ENSMUSG00000025495.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCATGTGACCTGATCT	NA	False	NA	NA	False	NA	NA	NA	140728666	140726342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_140726300_140728700
Isoform_174727_59	chr7	-	228	1	Intergenic	novelGene_10442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTTAACCAGGATTT	NA	False	NA	NA	False	NA	NA	NA	140737756	140737528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_140737500_140737800
Isoform_174728_3	chr7	+	687	1	Antisense	novelGene_ENSMUSG00000038650.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTCTCTGGATTATTT	NA	False	NA	NA	False	NA	NA	NA	140752519	140753206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_140752500_140753200
Isoform_174731_9	chr7	+	658	1	Intergenic	novelGene_9827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTGATCTGTTTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	15782327	15782985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_15782300_15783000
Isoform_174732_3	chr7	+	330	1	Intergenic	novelGene_10443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATCAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	140759615	140759945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140759600_140759900
Isoform_174733_9	chr7	-	177	1	Intergenic	novelGene_10444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTATTTATTTA	5139	False	NA	NA	False	NA	NA	NA	140782710	140782533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_140782500_140782700
Isoform_174734_3	chr7	-	2158	1	FSM	ENSMUSG00000065551.3	ENSMUST00000083617.3	110	1	-226	-1822	-226	1822	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAGGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140801632	140799474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_140799500_140801600
Isoform_174736_5	chr7	+	180	1	Intergenic	novelGene_10445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	140826051	140826231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140826100_140826200
Isoform_174737_6	chr7	+	183	1	Intergenic	novelGene_10446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACTGGGCATGGTGGTG	1309	False	NA	NA	False	NA	NA	NA	140846873	140847056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140846900_140847100
Isoform_174738_66	chr10	-	177	1	Intergenic	novelGene_1212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGATATATTTG	NA	False	NA	NA	False	NA	NA	NA	120390534	120390357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_120390400_120390500
Isoform_174739_6	chr7	+	202	1	Intergenic	novelGene_10448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTTTTCTCTGAGAAG	9114	False	NA	NA	False	NA	NA	NA	140866536	140866738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140866500_140866700
Isoform_17474_93	chr11	-	3202	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.395913206765	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_174740_9	chr7	-	162	2	Intergenic	novelGene_10449	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAATCTTTAAAAATAT	NA	False	NA	-17	True	NA	NA	NA	140884285	140884078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_140884197_140884241
Isoform_174741_38	chr7	+	174	1	ISM	ENSMUSG00000025505.17	ENSMUST00000134221.2	749	2	92	2224	92	596	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGATGAGC	6589	False	NA	NA	False	NA	NA	NA	140913662	140913836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_+_140913700_140913800
Isoform_174742_253	chr7	+	176	1	Intergenic	novelGene_10450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGTA	7422	False	NA	NA	False	NA	NA	NA	140928362	140928538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140928400_140928500
Isoform_174743_6	chr7	+	173	1	Intergenic	novelGene_10451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTGTTTAAACA	NA	False	NA	NA	False	NA	NA	NA	140932083	140932256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140932100_140932300
Isoform_174744_31	chr7	+	177	1	Intergenic	novelGene_10452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	140936636	140936813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140936600_140936800
Isoform_174747_15	chr7	+	172	1	Intergenic	novelGene_10453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAAATAAAAATTGGGG	7413	False	NA	NA	False	NA	NA	NA	140983811	140983983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_140983800_140984000
Isoform_174748_3	chr7	-	186	1	Intergenic	novelGene_10454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATGAAAAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	140984688	140984502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_140984500_140984700
Isoform_17475_72	chr11	-	3190	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.524559546787	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_174758_34	chr7	-	174	1	Intergenic	novelGene_10455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141122503	141122329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_141122300_141122500
Isoform_174759_24	chr7	+	168	1	Intergenic	novelGene_10456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAAGTGGCTCTGTGCC	NA	False	NA	NA	False	NA	NA	NA	141122934	141123102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_141122900_141123100
Isoform_174761_49	chr7	-	181	1	Intergenic	novelGene_10457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATACCCTATAGGC	NA	False	NA	NA	False	NA	NA	NA	141132647	141132466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_141132500_141132600
Isoform_174762_4	chr7	+	176	1	Intergenic	novelGene_10458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	271	False	NA	NA	False	NA	NA	NA	141132760	141132936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_141132800_141132900
Isoform_174767_43	chr7	-	176	1	Intergenic	novelGene_10459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAATACAGAT	9954	False	NA	NA	False	NA	NA	NA	141255512	141255336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_141255300_141255500
Isoform_17477_53	chr11	-	3239	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	462.558633900523	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	392	False	NA	-9	True	AATAAA	-19	NA	106615252	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_174778_7	chr7	+	768	1	FSM	ENSMUSG00000037772.14	ENSMUST00000209576.2	3715	1	4	2943	4	-2943	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAATAATAATA	NA	False	NA	NA	False	GGGGCT	-6	NA	142086902	142087670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142086900_142087700
Isoform_17478_47	chr11	-	3199	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	475.283288241479	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_174780_41	chr7	-	174	1	Intergenic	novelGene_10460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAATAAATAAA	2464	False	NA	NA	False	NA	NA	NA	142227511	142227337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_142227300_142227500
Isoform_174781_19	chr7	+	192	1	Intergenic	novelGene_10461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATCCAATATCTTTT	NA	False	NA	NA	False	NA	NA	NA	142264024	142264216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_142264000_142264200
Isoform_174785_5	chr7	+	1833	1	FSM	ENSMUSG00000045752.14	ENSMUST00000207776.2	1735	1	-97	-1	7	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTGTGGCTTTTTC	NA	False	NA	17	True	AATAAA	-16	NA	142622992	142624825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623000_142624800
Isoform_174786_12	chr7	+	1617	1	FSM	ENSMUSG00000045752.14	ENSMUST00000207776.2	1735	1	117	1	46	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAATTGTGTGGCTTTT	NA	False	NA	15	True	AATAAA	-14	NA	142623206	142624823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_142623200_142624800
Isoform_174788_48	chr7	+	178	1	Intergenic	novelGene_9828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	15983344	15983522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_15983300_15983500
Isoform_174789_3	chr7	-	4096	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	11268	77728	11268	-77728	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142839018	142834922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_142834900_142839000
Isoform_174790_176	chr7	-	181	1	Intergenic	novelGene_10462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	9307	False	NA	NA	False	NA	NA	NA	143059644	143059463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_143059500_143059600
Isoform_174791_5	chr7	+	2927	1	Antisense	novelGene_ENSMUSG00000059119.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	192	False	NA	NA	False	NA	NA	NA	143066926	143069853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_143066900_143069900
Isoform_174794_7	chr7	+	2431	1	Antisense	novelGene_ENSMUSG00000059119.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8736	False	NA	NA	False	NA	NA	NA	143078253	143080684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_143078300_143080700
Isoform_174795_148	chr7	+	181	1	Intergenic	novelGene_9829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAACAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	15990095	15990276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_15990100_15990300
Isoform_174796_52	chr7	-	2193	1	FSM	ENSMUSG00000010755.18	ENSMUST00000207168.2	2213	1	24	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACGAAAGAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	143153793	143151600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_143151600_143153800
Isoform_174798_53	chr7	-	177	1	Intergenic	novelGene_10463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACATTTT	NA	False	NA	NA	False	NA	NA	NA	143177714	143177537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_143177500_143177700
Isoform_174803_23	chr7	-	180	1	Intergenic	novelGene_10464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	143465852	143465672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_143465700_143465900
Isoform_174804_6	chr7	+	151	1	Intergenic	novelGene_9830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	15999249	15999400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_15999200_15999400
Isoform_174812_7	chr7	+	177	1	Intergenic	novelGene_10465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	144121733	144121910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_144121700_144121900
Isoform_174813_15	chr7	-	1291	1	FSM	ENSMUSG00000091811.3	ENSMUST00000169612.3	1605	1	314	0	314	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCGTTGGTTTCTGCT	NA	False	NA	-7	True	ATTAAA	-19	NA	16007228	16005937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16005900_16007200
Isoform_174814_6	chr7	-	172	1	Intergenic	novelGene_10466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	144124069	144123897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_144123900_144124100
Isoform_174815_3	chr7	-	2769	1	NIC	ENSMUSG00000031077.8	novel	3903	2	NA	NA	0	-2377	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTGGCTGGGTGTGA	NA	False	NA	-8	True	AATAAA	-18	NA	144136200	144133431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_144133400_144136200
Isoform_174842_3	chr7	+	230	1	Intergenic	novelGene_10467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGGTGGTCAGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	144434935	144435165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_144434900_144435200
Isoform_174843_3	chr7	-	188	1	Intergenic	novelGene_10468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAAACAGGCAAA	2105	False	NA	NA	False	NA	NA	NA	144447671	144447483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_144447500_144447700
Isoform_174844_3	chr7	-	1365	1	ISM	ENSMUSG00000096999.2	ENSMUST00000180930.2	2732	2	1535	2	1535	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAGAAAGAAAGAAAGA	113	False	NA	NA	False	NA	NA	NA	144449663	144448298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr7_-_144448300_144449700
Isoform_174846_244	chr7	-	165	1	Intergenic	novelGene_9831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTATTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	16024166	16024001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_16024000_16024200
Isoform_174857_42	chr7	-	175	1	Intergenic	novelGene_10469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAAGGGGAGTTTATCC	NA	False	NA	NA	False	NA	NA	NA	144710470	144710295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_144710300_144710500
Isoform_174858_11	chr7	+	175	1	Intergenic	novelGene_9832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	16024465	16024640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_16024500_16024600
Isoform_174859_24	chr7	-	177	1	Intergenic	novelGene_10470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGACTCACCT	NA	False	NA	NA	False	NA	NA	NA	144758833	144758656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_144758700_144758800
Isoform_174863_25	chr7	-	165	1	Intergenic	novelGene_9764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3321737	3321572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3321600_3321700
Isoform_174867_4	chr7	+	5300	2	Antisense	novelGene_ENSMUSG00000052833.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAACCAAACAA	3568	False	NA	NA	False	NA	NA	NA	16066309	16071647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_16070980_16071017
Isoform_174869_3	chr7	+	180	1	Intergenic	novelGene_9833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	16081936	16082116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_16081900_16082100
Isoform_17487_234	chr11	-	3199	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_14	370.599266494863	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_174871_5	chr7	+	192	1	Intergenic	novelGene_9834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAAAGGTACTAAAGAG	NA	False	NA	NA	False	NA	NA	NA	16093439	16093631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_16093400_16093600
Isoform_174874_4	chr7	+	170	1	Intergenic	novelGene_9835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGACAGAGGGGG	6336	False	NA	NA	False	NA	NA	NA	16126223	16126393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_16126200_16126400
Isoform_174878_20	chr7	+	217	1	Intergenic	novelGene_9765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATAAATAAATATATAAAT	NA	False	NA	NA	False	NA	NA	NA	3327542	3327759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3327500_3327800
Isoform_174879_31	chr7	-	175	1	FSM	ENSMUSG00000109781.2	ENSMUST00000209624.2	1229	1	1032	22	1032	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16140876	16140701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_16140700_16140900
Isoform_174896_8	chr7	+	3775	1	FSM	ENSMUSG00000099423.2	ENSMUST00000189720.2	798	1	-2177	-800	-2177	800	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16230479	16234254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16230500_16234300
Isoform_174897_5	chr7	-	175	1	Intergenic	novelGene_9836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAGAAA	6549	False	NA	NA	False	NA	NA	NA	16241961	16241786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_16241800_16242000
Isoform_174898_10	chr7	+	169	1	Intergenic	novelGene_9837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATGTACTGGCTAG	NA	False	NA	NA	False	NA	NA	NA	16389224	16389393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_16389200_16389400
Isoform_174899_3	chr7	-	178	1	Intergenic	novelGene_9838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGTGTCAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	16419621	16419443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_16419400_16419600
Isoform_1749_12	chr10	-	645	6	NIC	ENSMUSG00000061983.8	novel	490	7	NA	NA	3	-1	intron_retention	FALSE	canonical	3	98	junction_3	1551.61727239677	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTGTTTGCTGGTAT	NA	False	NA	-5	True	AATAAA	-26	NA	23663097	23661082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662522_23662779_23662891_23662943_23663053
Isoform_174901_18	chr7	+	220	1	Intergenic	novelGene_9839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTACCAAGTGTAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	16466981	16467201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_16467000_16467200
Isoform_174902_11	chr7	+	164	1	Intergenic	novelGene_9840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAACCCGAGTTT	NA	False	NA	NA	False	NA	NA	NA	16471279	16471443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_16471300_16471400
Isoform_174903_53	chr7	-	175	1	Intergenic	novelGene_9841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTTTAAAAAAACAA	8849	False	NA	NA	False	NA	NA	NA	16491479	16491304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_16491300_16491500
Isoform_174904_231	chr7	+	4107	1	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	1	-1693	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	16515293	16519400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_16515300_16519400
Isoform_17491_147	chr11	-	3196	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_14	370.771513611985	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	392	False	NA	-9	True	AATAAA	-19	NA	106615252	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_174933_80	chr7	-	172	1	Intergenic	novelGene_9842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTGTTTTCTGAG	NA	False	NA	NA	False	NA	NA	NA	16594006	16593834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_16593800_16594000
Isoform_174934_16	chr7	-	176	1	Intergenic	novelGene_9843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGCCCCCCCCCCCAA	2043	False	NA	NA	False	NA	NA	NA	16617829	16617653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_16617700_16617800
Isoform_174943_94	chr7	-	173	1	Intergenic	novelGene_9844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGGTGTGTGCCA	NA	False	NA	NA	False	NA	NA	NA	16661230	16661057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_16661100_16661200
Isoform_174945_3	chr7	+	171	1	Intergenic	novelGene_9845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	16671970	16672141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_16672000_16672100
Isoform_174946_9	chr7	+	4145	1	FSM	ENSMUSG00000070802.6	ENSMUST00000094807.6	4147	1	-6	8	-6	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGATTTTTCTCTGTG	NA	False	NA	NA	False	AATGAA	-17	NA	16678600	16682745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_16678600_16682700
Isoform_17495_290	chr11	-	3236	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_14	378.799506766483	290	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	392	False	NA	-9	True	AATAAA	-19	NA	106615252	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_174953_6	chr7	+	3625	3	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1111	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTTTCCGAGGTGG	5787	False	NA	19	True	AATAAA	-16	NA	16727743	16731440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_+_16729666_16729713_16730037_16730060
Isoform_174954_51	chr7	+	3532	3	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1202	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTTGTTTCCGAGGT	5878	False	NA	17	True	AATAAA	-14	NA	16727834	16731438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_+_16729666_16729713_16730022_16730045
Isoform_174955_4	chr7	+	3983	3	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1154	400	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAGTCTGAAAAAAGGA	5830	False	NA	NA	False	NA	NA	NA	16727786	16731841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_+_16729666_16729713_16730022_16730045
Isoform_174962_96	chr7	-	172	1	Intergenic	novelGene_9766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATATG	NA	False	NA	NA	False	NA	NA	NA	3408135	3407963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3408000_3408100
Isoform_174964_6	chr7	-	160	1	Intergenic	novelGene_9846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTTGCAAGCTA	7323	False	NA	NA	False	AATAAA	-9	NA	18649401	18649241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_18649200_18649400
Isoform_174965_131	chr7	+	180	1	Intergenic	novelGene_9847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAACACACAACT	2358	False	NA	NA	False	NA	NA	NA	18649441	18649621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_18649400_18649600
Isoform_174966_26	chr7	+	178	1	Intergenic	novelGene_9848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAAATAAAA	5064	False	NA	NA	False	NA	NA	NA	18732096	18732274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_18732100_18732300
Isoform_174967_47	chr7	+	207	1	Intergenic	novelGene_9849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	18737481	18737688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_18737500_18737700
Isoform_17497_102	chr11	-	3196	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_14	395.431726091875	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_174970_615	chr7	+	2534	1	FSM	ENSMUSG00000044030.5	ENSMUST00000053713.5	2734	1	12	188	12	-188	mono-exon	FALSE	NA	NA	NA	NA	NA	615	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTTCTTGTTCCCTTTA	NA	False	NA	24	True	AATAAA	-24	NA	18737980	18740514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18738000_18740500
Isoform_174971_84	chr7	+	2716	1	FSM	ENSMUSG00000044030.5	ENSMUST00000053713.5	2734	1	16	2	16	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGATGGTACTGAGATTCT	NA	False	NA	19	True	ATTAAA	-25	NA	18737984	18740700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_18738000_18740700
Isoform_174988_369	chrX	+	177	1	Intergenic	novelGene_12059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93173102	93173279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_93173100_93173300
Isoform_17499_51	chr11	-	3193	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_14	426.345511173695	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	392	False	NA	-9	True	AATAAA	-19	NA	106615252	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615208
Isoform_174999_6	chr11	-	184	1	Intergenic	novelGene_1704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	70896455	70896271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70896300_70896500
Isoform_175000_16	chr7	+	169	1	Intergenic	novelGene_9852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACTTGCTACT	2625	False	NA	NA	False	NA	NA	NA	19006993	19007162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_19007000_19007200
Isoform_175001_16	chr7	+	1110	1	Antisense	novelGene_ENSMUSG00000030402.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACAGGTATAACACA	8759	False	NA	1	True	AATAAA	-19	NA	19013127	19014237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_19013100_19014200
Isoform_175004_5	chr7	-	143	1	Genic_Genomic	ENSMUSG00000097266.2	novel	NA	NA	NA	NA	2386	18	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCCCCAGT	4907	False	NA	NA	False	NA	NA	NA	19032309	19032166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_-_19032200_19032300
Isoform_175005_58	chr7	-	173	1	Intergenic	novelGene_9767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3429833	3429660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3429700_3429800
Isoform_175009_11	chr7	+	196	1	Intergenic	novelGene_9853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTTGGAGGTGTGGCTC	1717	False	NA	NA	False	NA	NA	NA	19214296	19214492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_19214300_19214500
Isoform_175010_20	chr7	-	173	1	Intergenic	novelGene_9854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAACAAA	907	False	NA	NA	False	NA	NA	NA	19227082	19226909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_19226900_19227100
Isoform_175012_9	chr7	-	1856	2	NNC	ENSMUSG00000057667.8	novel	3188	2	NA	NA	18	-1306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATCAGCTGATATGCT	NA	False	NA	NA	False	NA	NA	NA	19242274	19239716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_19241536_19242237
Isoform_175013_5	chr7	+	200	1	Intergenic	novelGene_9768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGGTGGCGCACGCCT	NA	False	NA	NA	False	NA	NA	NA	3450232	3450432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3450200_3450400
Isoform_175017_7	chr7	-	2509	1	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-7	-7630	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19338395	19335886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_-_19335900_19338400
Isoform_175018_4	chr7	+	179	1	Intergenic	novelGene_9855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGTAAGTGGATCTT	6595	False	NA	4	True	NA	NA	NA	19339677	19339856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_19339700_19339900
Isoform_175022_5	chr7	+	167	1	Intergenic	novelGene_9856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAAGACAGGG	NA	False	NA	NA	False	NA	NA	NA	19381544	19381711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_19381500_19381700
Isoform_175049_8	chr7	+	169	1	Intergenic	novelGene_9857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATATTAAAAAAAAAAAAAA	2706	False	NA	NA	False	NA	NA	NA	19520611	19520780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_19520600_19520800
Isoform_175050_38	chr7	-	181	1	Intergenic	novelGene_9858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATGGTTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	19525599	19525418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_19525400_19525600
Isoform_175052_7	chr7	+	174	1	Intergenic	novelGene_9859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAACTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	19602729	19602903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_19602700_19602900
Isoform_175054_49	chr7	+	167	1	Intergenic	novelGene_9860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGGA	2285	False	NA	NA	False	NA	NA	NA	19667750	19667917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_19667800_19667900
Isoform_175055_22	chr7	+	172	1	Intergenic	novelGene_9861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTACAGCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	20414036	20414208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_20414000_20414200
Isoform_175056_35	chr7	+	173	1	Intergenic	novelGene_9864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTACAGCAGAGA	NA	False	NA	NA	False	NA	NA	NA	22927955	22928128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_22928000_22928100
Isoform_175057_23	chr7	+	174	1	Intergenic	novelGene_9862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTACAGCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	21256898	21257072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_21256900_21257100
Isoform_175059_37	chr7	+	173	1	Intergenic	novelGene_9863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTACAGCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	21705206	21705379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_21705200_21705400
Isoform_175061_518	chr7	-	649	1	FSM	ENSMUSG00000066724.4	ENSMUST00000086013.4	645	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	518	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAAGGCTGCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	23646715	23646066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_23646100_23646700
Isoform_175066_3	chr7	+	1177	1	Intergenic	novelGene_9865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAATGTATCCAC	NA	False	NA	NA	False	AATACA	-17	NA	23968245	23969422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_23968200_23969400
Isoform_175068_4	chr7	+	348	1	Intergenic	novelGene_9748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAACAAACCTGCCAG	3125	False	NA	NA	False	NA	NA	NA	3210217	3210565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3210200_3210600
Isoform_175069_12	chr7	+	175	1	Intergenic	novelGene_9866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGGGAAAAAAAGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	23996550	23996725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_23996600_23996700
Isoform_175070_4	chr7	-	497	1	FSM	ENSMUSG00000055826.6	ENSMUST00000069562.6	855	1	354	4	354	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGATGAGCGGGGCGTG	NA	False	NA	NA	False	AATAAA	-9	NA	24033007	24032510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_24032500_24033000
Isoform_175071_11	chr7	-	163	1	Intergenic	novelGene_9867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATTCTACAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	24160139	24159976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_24160000_24160100
Isoform_175072_46	chr7	+	177	1	Intergenic	novelGene_9868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24162887	24163064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_24162900_24163100
Isoform_175073_7	chr7	-	2477	1	Antisense	novelGene_ENSMUSG00000064264.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	1249	False	NA	NA	False	NA	NA	NA	24206867	24204390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_24204400_24206900
Isoform_175074_3	chr7	-	2619	1	Antisense	novelGene_ENSMUSG00000064264.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTGAAAAAAACAAAACAA	1101	False	NA	NA	False	NA	NA	NA	24207015	24204396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_24204400_24207000
Isoform_175075_10	chr7	-	1694	1	Intergenic	novelGene_9869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GGGGCT	-24	NA	24208820	24207126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_24207100_24208800
Isoform_175076_245	chr7	+	167	1	Intergenic	novelGene_9870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAACAAGAT	NA	False	NA	NA	False	NA	NA	NA	24239643	24239810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_24239600_24239800
Isoform_175077_51	chr7	-	183	1	Intergenic	novelGene_9871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTGACTTATGATCA	2062	False	NA	-1	True	NA	NA	NA	24297334	24297151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_24297200_24297300
Isoform_175079_7	chr7	-	184	1	Intergenic	novelGene_9769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAATAAGAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	3522262	3522078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3522100_3522300
Isoform_175083_12	chr7	+	176	1	Intergenic	novelGene_9872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATTAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	24565755	24565931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_24565800_24565900
Isoform_175084_17	chr7	-	177	1	Intergenic	novelGene_9873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGG	NA	False	NA	NA	False	NA	NA	NA	24614824	24614647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_24614600_24614800
Isoform_175085_26	chr15	-	158	1	Intergenic	novelGene_3801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAATAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	23070519	23070361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_23070400_23070500
Isoform_175086_6	chr7	-	158	1	Intergenic	novelGene_9874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	24658885	24658727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_24658700_24658900
Isoform_175088_11	chr7	+	347	1	Intergenic	novelGene_9875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAGGAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	24675401	24675748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_24675400_24675700
Isoform_175089_3	chr7	+	287	1	Intergenic	novelGene_9770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAAAAAAAAAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	3524548	3524835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3524500_3524800
Isoform_17509_100	chr11	-	3138	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9016	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	473.471167808096	100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	408	False	NA	-9	True	AATAAA	-19	NA	106615236	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_175095_80	chr9	-	177	1	Intergenic	novelGene_11747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	119835809	119835632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_119835600_119835800
Isoform_175096_4	chr7	+	180	1	Intergenic	novelGene_9876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAGTAAACAAA	582	False	NA	NA	False	NA	NA	NA	24898951	24899131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_24899000_24899100
Isoform_175098_71	chr7	+	172	1	Intergenic	novelGene_9877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	24962050	24962222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_24962000_24962200
Isoform_175101_36	chr7	+	174	1	Intergenic	novelGene_9771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGGGACACAA	NA	False	NA	NA	False	NA	NA	NA	3540935	3541109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3540900_3541100
Isoform_175104_8	chr7	-	169	1	Intergenic	novelGene_9878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTTAAAAATCATCAGG	8830	False	NA	NA	False	NA	NA	NA	25123653	25123484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_25123500_25123700
Isoform_175105_8	chr7	-	175	1	Intergenic	novelGene_9879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGACTAAAAA	6358	False	NA	NA	False	NA	NA	NA	25126125	25125950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_25126000_25126100
Isoform_175106_6	chr7	+	2754	1	NIC	ENSMUSG00000053714.9	novel	1887	7	NA	NA	135736	-32514	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAAAGAAATT	9131	False	NA	NA	False	NA	NA	NA	25230574	25233328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr7_+_25230600_25233300
Isoform_175107_3	chr7	+	1855	1	FSM	ENSMUSG00000059479.8	ENSMUST00000206824.2	1844	1	-5	-6	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGAGCGATTTCTTC	9962	False	NA	11	True	NA	NA	NA	25327061	25328916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_25327100_25328900
Isoform_17511_46	chr11	-	3143	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	473.607244966974	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_175111_6	chr7	+	5761	1	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25420999	25426760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_25421000_25426800
Isoform_175112_145	chr7	+	176	1	Intergenic	novelGene_9880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25426585	25426761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_25426600_25426800
Isoform_175113_208	chr7	-	207	1	Antisense	novelGene_ENSMUSG00000097017.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGACCAGGGATT	NA	False	NA	NA	False	NA	NA	NA	25517970	25517763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_-_25517800_25518000
Isoform_175116_8	chr7	+	173	1	Intergenic	novelGene_9772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3281	False	NA	NA	False	NA	NA	NA	3574245	3574418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_3574200_3574400
Isoform_175117_7	chr7	+	179	1	Intergenic	novelGene_9882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGAAAGAAAGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	26802947	26803126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_26802900_26803100
Isoform_175119_128	chr15	+	177	1	Intergenic	novelGene_3937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	72949434	72949611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_72949400_72949600
Isoform_175120_9	chr7	-	2380	1	Intergenic	novelGene_9773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	3582127	3579747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_3579700_3582100
Isoform_175123_3	chr7	-	3219	1	Genic_Genomic	ENSMUSG00000003752.10	novel	NA	NA	NA	NA	4961	2299	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	26907516	26904297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr7_-_26904300_26907500
Isoform_175125_56	chr7	+	182	1	Intergenic	novelGene_9884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	26947868	26948050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_26947900_26948000
Isoform_175126_6	chr7	-	290	1	Intergenic	novelGene_9885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAGAGTACTTAGC	NA	False	NA	NA	False	NA	NA	NA	26948507	26948217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_26948200_26948500
Isoform_175127_13	chr7	-	210	1	Intergenic	novelGene_9886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCCCAACAACCACATG	NA	False	NA	NA	False	NA	NA	NA	26948507	26948297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_26948300_26948500
Isoform_17513_67	chr11	-	3182	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	479.98502195566	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	392	False	NA	-9	True	AATAAA	-19	NA	106615252	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_175130_3	chr7	-	181	1	Intergenic	novelGene_9887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAACAAGCAA	NA	False	NA	NA	False	NA	NA	NA	26992491	26992310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_26992300_26992500
Isoform_175131_84	chr7	+	174	1	Intergenic	novelGene_9888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATCATCAAAGAAA	NA	False	NA	9	True	NA	NA	NA	26995024	26995198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_26995000_26995200
Isoform_175133_14	chr7	-	177	1	Intergenic	novelGene_9889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTATAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	27014476	27014299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27014300_27014500
Isoform_175134_17	chr7	+	172	1	Intergenic	novelGene_9890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAAGACCAAAC	NA	False	NA	NA	False	NA	NA	NA	27014527	27014699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27014500_27014700
Isoform_175138_43	chr7	-	181	1	Intergenic	novelGene_9891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGACACACATCA	NA	False	NA	NA	False	NA	NA	NA	27101639	27101458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27101500_27101600
Isoform_175140_33	chr7	+	175	1	Intergenic	novelGene_9892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGAAAGA	4403	False	NA	NA	False	NA	NA	NA	27137983	27138158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_27138000_27138200
Isoform_175142_63	chr10	-	181	1	Intergenic	novelGene_1000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTTTCCCCAT	NA	False	NA	NA	False	NA	NA	NA	75806362	75806181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75806200_75806400
Isoform_175143_6	chr7	+	1593	1	FSM	ENSMUSG00000040466.17	ENSMUST00000207799.2	1504	1	-49	-40	-20	40	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGAAGGGATTAGGGGA	NA	False	NA	NA	False	NA	NA	NA	27147436	27149029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_27147400_27149000
Isoform_175149_6	chr7	-	1097	1	FSM	ENSMUSG00000082016.4	ENSMUST00000117129.2	765	1	572	-904	572	904	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATCTGAAAGAAAG	9529	False	NA	NA	False	AATAAA	-36	NA	27169388	27168291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27168300_27169400
Isoform_17515_53	chr11	-	3142	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	493.407245649242	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_175151_3	chr7	-	1341	1	FSM	ENSMUSG00000082016.4	ENSMUST00000117129.2	765	1	328	-904	328	904	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATCTGAAAGAAAG	9285	False	NA	NA	False	AATAAA	-36	NA	27169632	27168291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_-_27168300_27169600
Isoform_175158_1391	chr7	-	158	1	Intergenic	novelGene_9893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATAAATCTTTAAA	6182	False	NA	NA	False	NA	NA	NA	27183297	27183139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27183100_27183300
Isoform_175159_31	chr8	-	1125	5	FSM	ENSMUSG00000069633.13	ENSMUST00000004686.13	2870	5	32	1713	-3	-1710	multi-exon	FALSE	canonical	3	21	junction_1	4.14578098794425	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGTGCATGAGGT	NA	False	NA	-3	True	ATTAAA	-15	NA	3517648	3508817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517571
Isoform_175160_3	chr8	-	927	4	ISM	ENSMUSG00000069633.13	ENSMUST00000111081.10	666	5	6	1710	6	-1710	5prime_fragment	FALSE	canonical	0	0	junction_3	10.9645894689324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGTGCATGAGGT	NA	False	NA	-3	True	ATTAAA	-15	NA	3517639	3508817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_3509435_3510271_3510335_3513921_3514101_3517571
Isoform_175173_1381	chr8	-	2657	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	20	0	6	0	multi-exon	FALSE	canonical	3	374	junction_12	44.2084358744927	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1031	False	NA	-4	True	AATACA	-16	NA	3671296	3660086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
Isoform_175174_35	chr8	-	2779	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	-106	4	-106	-1	multi-exon	FALSE	canonical	3	374	junction_12	44.2084358744927	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCCCGGTCTTGACCTC	905	False	NA	-8	True	AATACA	-12	NA	3671422	3660090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
Isoform_175179_25	chr8	-	2729	18	FSM	ENSMUSG00000019470.13	ENSMUST00000163038.8	4409	18	14	1666	-9	0	multi-exon	FALSE	canonical	3	374	junction_11	45.4063544476041	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1036	False	NA	-4	True	AATACA	-16	NA	3671291	3660086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
Isoform_175181_22	chr8	-	374	2	FSM	ENSMUSG00000089665.3	ENSMUST00000159364.3	392	2	21	-3	21	3	multi-exon	FALSE	canonical	3	78	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGTCTTTCTATTAC	NA	False	NA	-1	True	AATACA	-18	NA	3722341	3721184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_3721397_3722179
Isoform_175182_5	chr8	-	2152	8	FSM	ENSMUSG00000051906.16	ENSMUST00000145007.8	1186	8	-972	6	-972	0	multi-exon	FALSE	canonical	1	1	junction_7	2.39045721866879	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGTCTGATGTGTCCC	NA	False	NA	NA	False	AATAAA	-13	NA	4156807	4152792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_4153250_4153621_4153735_4154101_4154254_4154484_4154572_4154822_4154892_4155270_4155355_4155465_4155547_4155698
Isoform_175184_4	chr8	-	1152	2	FSM	ENSMUSG00000048644.9	ENSMUST00000053252.9	1212	2	59	1	59	-1	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGCTGAGTTAACCAGT	NA	False	NA	-17	True	AATAAA	-33	NA	4309215	4307660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_4308648_4309050
Isoform_175192_781	chr8	-	1781	13	FSM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	9	0	9	0	multi-exon	FALSE	canonical	3	458	junction_5	35.4920765805553	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325904	4309730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
Isoform_175195_13	chr8	-	1783	13	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	152.04074746228	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4325904	4309731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136_4324233_4325842
Isoform_175198_11	chr8	-	3345	11	NIC	ENSMUSG00000002949.16	novel	3041	12	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	458	junction_4	35.296033771516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGAACGGTTTGAAGT	NA	False	NA	-15	True	AATAAA	-20	NA	4325895	4309732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4316681_4316769_4316863_4317254_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
Isoform_1752_32	chr10	-	560	5	FSM	ENSMUSG00000061983.8	ENSMUST00000220070.2	494	5	-64	-2	26	2	multi-exon	FALSE	canonical	3	3174	junction_1	596.623153674076	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTGTATTTCTTG	NA	False	NA	-16	True	AATAAA	-15	NA	23663051	23661093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891
Isoform_175200_34	chr8	-	2089	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	148.130479270435	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325904	4309730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_4310256_4310511_4310931_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
Isoform_175201_13	chr8	-	2092	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	199.596728847611	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325904	4309730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_4310256_4310511_4310931_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136_4324233_4325842
Isoform_175213_362	chr8	-	2481	8	NNC	ENSMUSG00000040028.11	novel	2317	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	192	junction_6	671.222856023973	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4375078	4338342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885_4375006_4375029
Isoform_175218_2351	chr8	-	2447	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	334	2962	7	-1	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	2351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375079	4338343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
Isoform_175219_773	chr8	-	2443	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	849	junction_6	323.926260470222	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4375098	4338342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885_4375006_4375029
Isoform_175235_399	chr8	-	2147	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	8	1	5	-1	multi-exon	FALSE	canonical	3	204	junction_9	39.0672497112351	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTGTGAAATGTGGAT	NA	False	NA	-6	True	TATAAA	-14	NA	4829546	4785976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
Isoform_175237_26	chr8	-	3778	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	8	-1630	5	1630	multi-exon	TRUE	canonical	3	204	junction_9	39.0672497112351	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTCCTCTGCTCATCA	NA	False	NA	NA	False	AATAAA	-19	NA	4829546	4784345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
Isoform_175239_15	chr8	-	2615	12	FSM	ENSMUSG00000022322.9	ENSMUST00000208856.2	2365	12	3	-253	3	-1	multi-exon	FALSE	canonical	3	204	junction_8	40.3396734765956	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTGTGAAATGTGGAT	NA	False	NA	-6	True	TATAAA	-14	NA	4829548	4785976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
Isoform_175241_14	chr8	-	890	4	ISM	ENSMUSG00000022322.9	ENSMUST00000208856.2	2365	12	4	28381	4	1	5prime_fragment	FALSE	canonical	3	272	junction_2	23.7205958328763	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGTTGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4829547	4814610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_4815090_4817906_4818023_4818143_4818312_4829420
Isoform_175243_8	chr8	-	4783	5	FSM	ENSMUSG00000001300.17	ENSMUST00000001319.15	4793	5	4	6	1	-6	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGCGCCTTCAAAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	8711238	8667439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_8670977_8672330_8672445_8673147_8673241_8689205_8689490_8710483
Isoform_175261_552	chr8	-	1703	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	-7	1501	-7	0	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5248	False	NA	-11	True	AATAAA	-35	NA	8740528	8716575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
Isoform_175264_10	chr8	-	1983	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	-11	1225	-11	276	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACAGAATATTGTTAC	5244	False	NA	NA	False	AATAAA	-20	NA	8740532	8716299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
Isoform_175267_308	chr8	-	3982	3	FSM	ENSMUSG00000040459.12	ENSMUST00000208252.2	3559	3	-424	1	-7	-1	multi-exon	FALSE	canonical	3	891	junction_2	32	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5248	False	NA	-12	True	AATAAA	-34	NA	8740528	8716576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_8717417_8731383_8733974_8739976
Isoform_175274_13	chr8	-	3213	2	FSM	ENSMUSG00000049717.10	ENSMUST00000095476.6	5028	2	-12	1827	-12	1	multi-exon	FALSE	canonical	2	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGCAAAAAAAAAAAAACCA	NA	False	NA	NA	False	ACTAAA	-8	NA	10026311	10020875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_10023808_10026030
Isoform_175276_13	chr8	-	4084	2	FSM	ENSMUSG00000049717.10	ENSMUST00000095476.6	5028	2	-28	972	-28	856	multi-exon	FALSE	canonical	2	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAACTTTATGTTCCTT	NA	False	NA	-5	True	NA	NA	NA	10026327	10020020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_10023808_10026030
Isoform_175278_3	chr8	-	5031	2	FSM	ENSMUSG00000038894.8	ENSMUST00000040514.8	6323	2	1286	6	1286	-6	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATACAGATTGGAGGA	NA	False	NA	NA	False	AATAAA	-21	NA	11057172	11034686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11037015_11054469
Isoform_175284_22	chr8	-	6478	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	36	101	36	-93	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAAGCTTTTATGGA	NA	False	NA	NA	False	AATAAA	-12	NA	11362790	11248523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
Isoform_175285_3	chr8	-	6528	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	77	10	-60	-2	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATACCTTAGATCATTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11362749	11248432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
Isoform_175287_4	chr8	-	1375	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	21	-4	21	4	multi-exon	FALSE	canonical	1	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGGGAATGTTTGAC	NA	False	NA	NA	False	ATTAAA	-21	NA	11528689	11503513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11504527_11528327
Isoform_175289_5	chr8	-	1221	9	ISM	ENSMUSG00000056228.11	ENSMUST00000210478.2	2007	15	20242	-7	-10113	-2	3prime_fragment	FALSE	canonical	3	186	junction_7	21.2940719450273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCTATGCTGCCCA	NA	False	NA	-53	True	ATTAAA	-32	NA	11580499	11564013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294
Isoform_175291_357	chr8	-	1774	15	NIC	ENSMUSG00000056228.11	novel	1902	15	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	153	junction_9	26.6340468006571	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAAAGTGGGCCTATGC	NA	False	NA	-59	True	ATTAAA	-26	NA	11600701	11564019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
Isoform_175293_71	chr8	-	1806	15	FSM	ENSMUSG00000056228.11	ENSMUST00000049461.7	1902	15	53	43	11	1	multi-exon	FALSE	canonical	3	35	junction_9	50.1547096288991	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAAAGTGGGCCTATGC	NA	False	NA	-59	True	ATTAAA	-26	NA	11600730	11564019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580428_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
Isoform_175297_14	chr8	-	814	4	FSM	ENSMUSG00000056228.11	ENSMUST00000210845.2	826	4	13	-1	10	1	multi-exon	FALSE	canonical	3	13	junction_1	105.379736614251	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCAGCCTGTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	11600731	11596675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11597088_11597726_11597845_11600257_11600309_11600498
Isoform_175318_64	chr8	-	2314	7	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	194.263280684287	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685071	11661583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11684810
Isoform_175319_21	chr8	-	2375	7	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-96	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	194.263280684287	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685132	11661583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11684810
Isoform_17532_33	chr11	-	1528	8	FSM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	-23	1	-1	-1	multi-exon	FALSE	canonical	3	24	junction_7	14.9652659072089	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGTTTTGGACTTTTGT	4296	False	NA	NA	False	AATAAA	-32	NA	106670364	106659079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669784
Isoform_175321_346	chr8	-	2395	7	FSM	ENSMUSG00000031508.15	ENSMUST00000210530.2	2398	7	3	0	3	0	multi-exon	FALSE	canonical	3	111	junction_4	160.305350988529	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685751	11661582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11685410
Isoform_17533_15	chr11	-	1403	8	NIC	ENSMUSG00000020718.13	novel	1770	8	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	16.8001457719623	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGTTTTGGACTTTTGT	4296	False	NA	NA	False	AATAAA	-32	NA	106670364	106659079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669909
Isoform_175331_89	chr8	-	2445	7	FSM	ENSMUSG00000031508.15	ENSMUST00000211174.2	2447	7	3	-1	3	0	multi-exon	FALSE	canonical	3	27	junction_4	195.638626610959	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685751	11661582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11685410
Isoform_175334_21	chr8	-	7026	6	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	89	junction_3	156.362399572276	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685752	11661582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11678531_11682865_11683019_11685410
Isoform_175336_20	chr8	-	2205	6	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	185.378531658874	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685073	11661582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11684810
Isoform_175338_978	chr8	-	2283	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	3	-1	3	0	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685751	11661582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
Isoform_175348_19	chr8	-	5145	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	11	0	8	0	multi-exon	FALSE	canonical	3	209	junction_2	122.541829593001	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685746	11661582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
Isoform_175349_26	chr8	-	772	6	NNC	ENSMUSG00000031509.11	novel	1263	6	NA	NA	-3534	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	15.5897402159241	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATCTGATAGGGCTGTT	NA	False	NA	-9	True	AATAAA	-21	NA	11716138	11705478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_11705682_11706108_11706190_11711671_11711756_11712589_11712692_11715035_11715099_11715899
Isoform_175350_5	chr8	-	845	6	NNC	ENSMUSG00000031509.11	novel	1263	6	NA	NA	-3525	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	20.8173004974228	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATCTGATAGGGCTGTT	NA	False	NA	-9	True	AATAAA	-21	NA	11716129	11705478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_11705682_11706108_11706190_11711671_11711756_11712589_11712774_11715035_11715099_11715899
Isoform_175351_4	chr8	-	683	5	NNC	ENSMUSG00000031509.11	novel	1263	6	NA	NA	-3519	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.6376408140999	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCTGTTTTATTTCTTC	NA	False	NA	1	True	AATAAA	-31	NA	11716123	11705468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_11705682_11706108_11706190_11712589_11712692_11715035_11715099_11715899
Isoform_175356_471	chr8	-	3663	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	132	2	7	0	multi-exon	FALSE	canonical	3	142	junction_11	12.9206544206397	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722116	12664278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
Isoform_175361_6	chr8	-	4570	21	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	142	junction_11	13.0866344030847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722121	12664278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
Isoform_175364_23	chr8	-	4844	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_8	35.7078089365284	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722113	12664278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
Isoform_175365_6	chr8	-	3735	21	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	10	0	intron_retention	FALSE	canonical	3	142	junction_10	12.4843902534325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722113	12664278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
Isoform_175371_19	chr8	-	1606	8	NIC	ENSMUSG00000038515.11	novel	1408	7	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	134.762678779537	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGCTTCTGTGCTCATG	3653	False	NA	NA	False	NA	NA	NA	13250604	13222022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_13222613_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
Isoform_175373_11	chr8	-	3475	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	42	-504	9	504	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTTGCCAGAAAGTG	3679	False	NA	NA	False	AGTAAA	-41	NA	13250578	13224657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
Isoform_175374_309	chr8	-	1239	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	8	1766	5	1	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTGTTCTCCATTTT	3645	False	NA	-27	True	TTTAAA	-12	NA	13250612	13226927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
Isoform_175375_107	chr8	-	1298	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	8	1707	5	1	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATGATCTTAGTTGGG	3645	False	NA	0	True	CATAAA	-18	NA	13250612	13226868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
Isoform_175379_40	chr8	-	2741	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	8	-1	0	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13337833	13305962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_175381_12	chr8	-	3044	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	-296	0	-6	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13338137	13305963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_175383_10	chr8	-	2657	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110838.8	2955	6	299	-1	1	0	multi-exon	FALSE	canonical	3	14	junction_2	13.5558105622644	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13337832	13305962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13307977_13308946_13309044_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_175384_5	chr8	-	2949	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110838.8	2955	6	6	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	13.5558105622644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13338125	13305963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13307977_13308946_13309044_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_175386_20	chr8	-	2576	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	277	0	-7	0	multi-exon	FALSE	canonical	3	21	junction_1	12.0701077045733	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13337848	13305962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_175387_15	chr8	-	2858	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	-6	1	0	0	multi-exon	FALSE	canonical	3	21	junction_1	12.0701077045733	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13338131	13305963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_175389_4	chr8	-	2097	2	NNC	ENSMUSG00000038506.14	novel	2853	5	NA	NA	10869	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13320723	13305962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_13307977_13320640
Isoform_175391_249	chr8	-	2576	15	FSM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	-29	1	-29	-1	multi-exon	FALSE	canonical	3	43	junction_8	9.27719389312373	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTTGGTCACTGTC	5731	False	NA	0	True	AATAAA	-22	NA	13544519	13515374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13515901_13516626_13516856_13518191_13518365_13520218_13520388_13521448_13521614_13524656_13524847_13525038_13525158_13526111_13526234_13527043_13527167_13528251_13528375_13529006_13529130_13533673_13533737_13535670_13535696_13543845_13544013_13544260
Isoform_175393_68	chr8	-	4152	24	FSM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	-18	270	-18	-268	multi-exon	FALSE	canonical	3	46	junction_3	7.20402114134286	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGAGTGGTTTGGATT	NA	False	NA	-2	True	ATTAAA	-18	NA	13727621	13617217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
Isoform_175394_113	chr8	-	4112	24	FSM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	22	270	22	-268	multi-exon	FALSE	canonical	3	46	junction_3	7.20402114134286	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGAGTGGTTTGGATT	NA	False	NA	-2	True	ATTAAA	-18	NA	13727581	13617217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
Isoform_175396_12	chr8	-	3159	21	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	20	9530	20	992	5prime_fragment	FALSE	canonical	3	48	junction_6	6.62947961758689	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTCACCGTTTTGTCT	NA	False	NA	NA	False	CATAAA	-15	NA	13727583	13626477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
Isoform_175397_282	chr8	-	767	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	19	7	19	-7	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCACCTAGTATGCTCT	NA	False	NA	-15	True	AATAAA	-9	NA	13940249	13934800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
Isoform_175398_80	chr8	-	1096	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	19	-322	19	322	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGTACACTGTTGCT	NA	False	NA	NA	False	TTTAAA	-23	NA	13940249	13934471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
Isoform_175399_78	chr8	-	801	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-12	4	1	-4	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTAGTATGCTCTGTC	NA	False	NA	-12	True	AATAAA	-12	NA	13940280	13934797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
Isoform_175400_23	chr8	-	1128	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-13	-322	0	322	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGTACACTGTTGCT	NA	False	NA	NA	False	TTTAAA	-23	NA	13940281	13934471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
Isoform_175402_527	chr8	-	2409	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	54	0	20	0	multi-exon	FALSE	canonical	3	271	junction_2	12.5	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4834	False	NA	-4	True	ATTAAA	-18	NA	14024723	14002007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_14004136_14005719_14005818_14024540
Isoform_175403_71	chr8	-	2664	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	-203	2	52	-2	multi-exon	FALSE	canonical	3	271	junction_2	12.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGTGTATATT	4577	False	NA	-6	True	ATTAAA	-16	NA	14024980	14002009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_14004136_14005719_14005818_14024540
Isoform_175404_10	chr8	-	2712	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	-251	2	4	-2	multi-exon	FALSE	canonical	3	271	junction_2	12.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGTGTATATT	4529	False	NA	-6	True	ATTAAA	-16	NA	14025028	14002009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_14004136_14005719_14005818_14024540
Isoform_175407_12	chr8	-	2778	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	54	-369	20	369	multi-exon	FALSE	canonical	3	271	junction_2	12.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATGAAAAAAATG	4834	False	NA	NA	False	NA	NA	NA	14024723	14001638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_14004136_14005719_14005818_14024540
Isoform_175415_53	chr8	-	2477	4	FSM	ENSMUSG00000050052.13	ENSMUST00000145695.2	373	4	1	-2105	1	0	multi-exon	FALSE	canonical	3	28	junction_3	120.875509880575	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4526	False	NA	-4	True	ATTAAA	-18	NA	14025031	14002007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_14004136_14005719_14005818_14024540_14024730_14024969
Isoform_175418_18	chr8	-	2480	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	23	0	intron_retention	FALSE	canonical	3	23	junction_3	123.22427610752	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4548	False	NA	-4	True	ATTAAA	-18	NA	14025009	14002007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14024944
Isoform_175422_12	chr8	-	2309	2	FSM	ENSMUSG00000050052.13	ENSMUST00000210414.2	323	2	-30	-1956	20	-2	multi-exon	FALSE	canonical	2	12	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGTGTATATT	4834	False	NA	-6	True	ATTAAA	-16	NA	14024723	14002009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_14004136_14024540
Isoform_175424_29	chr8	-	3243	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-23	-1663	-23	1663	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTTGGTTTTTTTTT	NA	False	NA	-11	True	NA	NA	NA	14140324	14075897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
Isoform_175426_216	chr8	-	1580	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-22	-1	-22	1	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTGTGATAAGATTA	NA	False	NA	-5	True	AATAAA	-19	NA	14140323	14077559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
Isoform_175428_92	chr8	-	1621	6	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	79.7696684210233	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGTGATAAGATTATAA	NA	False	NA	-2	True	AATAAA	-22	NA	14140297	14077556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
Isoform_175430_15	chr8	-	3280	6	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	5	1664	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	79.7696684210233	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTGGTTTTTTTTTT	NA	False	NA	-10	True	NA	NA	NA	14140296	14075896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
Isoform_175436_5	chr8	-	3162	7	FSM	ENSMUSG00000039814.16	ENSMUST00000055503.12	3176	7	12	2	12	1	multi-exon	FALSE	canonical	1	1	junction_6	13.3998341614945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATTAGTGTTAGTATC	NA	False	NA	-5	True	NA	NA	NA	19000977	18982746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000551
Isoform_175437_6	chr8	-	2994	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	-156	0	-156	0	multi-exon	FALSE	canonical	2	24	junction_4	7.05730511991338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	-3	True	NA	NA	NA	19001147	18982744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
Isoform_175438_55	chr8	-	2821	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	17	0	15	0	multi-exon	TRUE	canonical	2	24	junction_4	7.05730511991338	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	-3	True	NA	NA	NA	19000974	18982744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
Isoform_175439_6	chr8	-	2926	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	-88	0	-88	0	multi-exon	FALSE	canonical	2	24	junction_4	7.05730511991338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	-3	True	NA	NA	NA	19001079	18982744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
Isoform_175440_3	chr8	-	5448	6	NIC	ENSMUSG00000039814.16	novel	2838	7	NA	NA	9	0	intron_retention	FALSE	canonical	2	24	junction_3	7.30479294709987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	-3	True	NA	NA	NA	19000980	18982744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
Isoform_175441_63	chr8	-	2030	16	FSM	ENSMUSG00000031478.17	ENSMUST00000033865.16	2021	16	-10	1	-10	-1	multi-exon	FALSE	canonical	3	19	junction_15	6.34350061086148	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGTGTGCTGGTTTTCA	NA	False	NA	1	True	AATACA	-16	NA	22656438	22618299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
Isoform_175442_6	chr8	-	2031	16	FSM	ENSMUSG00000031478.17	ENSMUST00000110730.10	2050	16	13	6	-10	-3	multi-exon	FALSE	canonical	1	3	junction_4	9.555917305814	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAACCGTGTGTGCTGGT	NA	False	NA	-4	True	AATACA	-11	NA	22656438	22618304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622216_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
Isoform_175444_299	chr8	-	2284	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	19	290	19	-5	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACATTTCATTGATTGAC	NA	False	NA	-6	True	AATAAA	-21	NA	22675816	22658465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
Isoform_175446_50	chr8	-	2579	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	19	-5	19	5	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATGAGAGTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	22675816	22658170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
Isoform_175448_12	chr8	-	3967	8	NIC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	3	-7	intron_retention	FALSE	canonical	3	249	junction_5	11.2431384971149	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACATTTCATTGATTG	NA	False	NA	-8	True	AATAAA	-19	NA	22675832	22658467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_22658991_22659728_22659964_22663277_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
Isoform_175453_548	chr8	-	3426	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	3	1	3	-1	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTCTGGTCGTAGTG	NA	False	NA	-7	True	NA	NA	NA	22888610	22865567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
Isoform_175460_11	chr8	-	3665	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	193	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	86.8192566965033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTCTGGTCGTAGTG	NA	False	NA	-7	True	NA	NA	NA	22888367	22865567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22887973
Isoform_175464_34	chr8	-	956	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	59	387	32	-387	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGGGTAGTTTGCTC	NA	False	NA	0	True	ATTAAA	-14	NA	22966839	22953017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
Isoform_175465_25	chr8	-	996	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	19	387	-8	-387	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGGGTAGTTTGCTC	NA	False	NA	0	True	ATTAAA	-14	NA	22966879	22953017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
Isoform_175466_28	chr8	-	1339	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	60	3	33	-3	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTGCCTTGCATCATT	NA	False	NA	-4	True	NA	NA	NA	22966838	22952633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
Isoform_175467_16	chr8	-	1408	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	-5	-1	-5	0	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTGCATCATTTTGT	NA	False	NA	0	True	NA	NA	NA	22966903	22952629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
Isoform_175473_5	chr8	-	853	3	NIC	ENSMUSG00000031534.16	novel	1402	4	NA	NA	8	-389	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	106.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTGGGGTAGTTTGC	NA	False	NA	-2	True	ATTAAA	-12	NA	22966863	22953019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_22953392_22963457_22963597_22966521
Isoform_175482_1813	chr8	-	1334	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	19	1	19	-1	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCATCTGACTTCTTA	NA	False	NA	-12	True	AATAAA	-21	NA	23083755	23067102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
Isoform_175483_380	chr8	-	1366	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	-13	1	-13	-1	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCATCTGACTTCTTA	NA	False	NA	-12	True	AATAAA	-21	NA	23083787	23067102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
Isoform_175496_239	chr8	-	1195	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	3	3	3	-3	multi-exon	FALSE	canonical	3	173	junction_8	16.1157058899497	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGTCTTAACAAATGTG	NA	False	NA	NA	False	AATAAA	-17	NA	23143431	23118144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
Isoform_175498_3	chr8	-	1125	13	NIC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	57.9167865706193	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATTGTCTTAACAAATG	NA	False	NA	NA	False	AATAAA	-15	NA	23143450	23118146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_23118386_23120358_23120499_23121470_23121536_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
Isoform_175499_133	chr8	-	3561	22	FSM	ENSMUSG00000031537.16	ENSMUST00000033939.13	3580	22	19	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.670796433355	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196575	23149227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_1755_167	chr10	-	496	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	75	13	2	2	multi-exon	FALSE	canonical	3	2594	junction_5	774.773670177298	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTGTATTTCTTG	NA	False	NA	-16	True	AATAAA	-15	NA	23663098	23661093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
Isoform_175501_4	chr8	-	3438	21	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_9	25.1759309659047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196576	23149227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_175502_7	chr8	-	3441	21	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	24.678482530334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196547	23149228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_23150476_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_175504_53	chr8	-	4507	21	FSM	ENSMUSG00000031537.16	ENSMUST00000063401.10	3977	21	26	-556	0	0	multi-exon	FALSE	canonical	3	51	junction_9	16.2802794816305	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196579	23149227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_175506_6	chr8	-	4347	20	NIC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	-3	0	intron_retention	FALSE	canonical	3	4	junction_8	23.848668784024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196544	23149228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_175507_11	chr8	-	2832	12	ISM	ENSMUSG00000031537.16	ENSMUST00000146212.8	4845	20	19	9790	0	-2136	5prime_fragment	FALSE	canonical	3	74	junction_1	13.6078489747281	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	23196575	23160162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_175509_8	chr8	-	612	3	FSM	ENSMUSG00000031537.16	ENSMUST00000150214.2	601	3	-31	20	3	-20	multi-exon	FALSE	canonical	3	15	junction_1	54.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTTTTAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	23196572	23192487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23192890_23196097_23196221_23196485
Isoform_175510_6	chr8	-	3418	9	FSM	ENSMUSG00000031539.7	ENSMUST00000163739.3	3417	9	-7	6	-7	-6	multi-exon	FALSE	canonical	0	0	junction_8	7.29618907375624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGACTATGTCTGGTT	NA	False	NA	-7	True	AATAAA	-12	NA	23295627	23277375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295529
Isoform_175511_13	chr8	-	3408	9	FSM	ENSMUSG00000031539.7	ENSMUST00000210656.2	3373	9	-35	0	-35	0	multi-exon	FALSE	canonical	3	19	junction_1	1.96452920568771	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	False	NA	-1	True	AATAAA	-18	NA	23295673	23277369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295591
Isoform_175514_21	chr8	-	3361	9	FSM	ENSMUSG00000031539.7	ENSMUST00000210656.2	3373	9	12	0	-6	0	multi-exon	FALSE	canonical	3	19	junction_1	1.96452920568771	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	False	NA	-1	True	AATAAA	-18	NA	23295626	23277369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295591
Isoform_175520_466	chr8	-	3080	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-30	2468	-30	-2468	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	-18	True	AATAAA	-18	NA	23698392	23663748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
Isoform_175521_55	chr8	-	3153	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-109	2474	-109	-2474	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATTTAGGGACTTTGC	NA	False	NA	-24	True	AATAAA	-12	NA	23698471	23663754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
Isoform_175532_166	chr8	-	1149	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	-12	212	-12	-212	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTCTACTACTTACTG	NA	False	NA	-3	True	AATAAA	-24	NA	23727687	23716843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
Isoform_175533_251	chr8	-	1127	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	10	212	10	-212	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTCTACTACTTACTG	NA	False	NA	-3	True	AATAAA	-24	NA	23727665	23716843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
Isoform_175534_24	chr8	-	1508	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	13	-172	13	172	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGCTAACCAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	23727662	23716459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
Isoform_175536_104	chr8	-	1331	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	10	8	10	-8	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAATGTCTCAAATGT	NA	False	NA	-30	True	NA	NA	NA	23727665	23716639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
Isoform_175541_7	chr8	-	1032	7	NIC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	10	-216	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	242.691676824732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTTTCTACTACTT	NA	False	NA	-7	True	AATAAA	-20	NA	23727665	23716847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_23717192_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
Isoform_175545_273	chr8	-	1945	5	FSM	ENSMUSG00000015341.18	ENSMUST00000121783.7	1945	5	1	-1	1	1	multi-exon	TRUE	canonical	3	1223	junction_2	41.2946727799119	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACCCTCTCTTGTCTT	NA	False	NA	-25	True	AGTAAA	-11	NA	23747036	23731367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689
Isoform_175547_1248	chr8	-	1763	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	23	6	15	1	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACCCTCTCTTGTCTT	NA	False	NA	-25	True	AGTAAA	-11	NA	23747067	23731367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
Isoform_175551_40	chr8	-	3995	22	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	31.0462313449736	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTCGTCCTCTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	25506923	25439628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
Isoform_175553_8	chr8	-	4133	22	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	-121	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	31.0462313449736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTTTGTCGTCCTCT	NA	False	NA	NA	False	AATAAA	-30	NA	25507064	25439631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
Isoform_175555_30	chr8	-	3951	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	34	0	34	0	multi-exon	FALSE	non_canonical	0	0	junction_2	31.0462313449736	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	False	NA	NA	False	AATAAA	-35	NA	25506904	25439626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
Isoform_175556_77	chr8	-	3926	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	59	0	-44	0	multi-exon	TRUE	non_canonical	0	0	junction_2	31.0462313449736	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	False	NA	NA	False	AATAAA	-35	NA	25506879	25439626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
Isoform_175557_8	chr8	-	4107	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	-123	1	-118	-1	multi-exon	FALSE	non_canonical	0	0	junction_2	31.0462313449736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCGTCCTCTTTAT	NA	False	NA	NA	False	AATAAA	-34	NA	25507061	25439627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
Isoform_175560_5	chr8	-	3206	12	NIC	ENSMUSG00000031557.17	novel	5176	12	NA	NA	-20	-15	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	41.1584320513503	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8155	False	NA	5	True	NA	NA	NA	25581382	25530870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25581298
Isoform_175561_4	chr8	-	3268	12	FSM	ENSMUSG00000031557.17	ENSMUST00000098866.11	1158	12	-20	-2090	-20	-14	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5805	False	NA	6	True	NA	NA	NA	25591807	25530869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591662
Isoform_175563_78	chr8	-	3249	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	200	14	-14	-14	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5811	False	NA	6	True	NA	NA	NA	25591801	25530869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
Isoform_175569_8	chr8	-	4927	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	229	-1693	15	-3	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTGTGTGTTTTC	5840	False	NA	NA	False	AATAAA	-16	NA	25591772	25529162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
Isoform_175570_26	chr8	-	3249	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	217	1710	-5	-14	multi-exon	FALSE	canonical	3	27	junction_11	35.6008635794598	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9905	False	NA	6	True	NA	NA	NA	25592175	25530869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
Isoform_175572_6	chr8	-	3492	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	-26	1710	-26	-14	multi-exon	FALSE	canonical	3	27	junction_11	35.6008635794598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9662	False	NA	6	True	NA	NA	NA	25592418	25530869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
Isoform_175582_16	chr8	-	7826	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	-41	3	-41	-3	multi-exon	FALSE	canonical	0	0	junction_12	24.1986856851542	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCGGGGTGTGTTGTCT	NA	False	NA	-3	True	AATAAA	-18	NA	25691599	25644570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
Isoform_175587_6	chr8	-	6620	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	-152	3	-59	-3	multi-exon	FALSE	canonical	0	0	junction_10	23.6550206087418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCGGGGTGTGTTGTCT	NA	False	NA	-3	True	AATAAA	-18	NA	25691617	25644570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
Isoform_175592_16	chr8	-	6234	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	16	-1	combination_of_known_junctions	TRUE	canonical	3	13	junction_10	20.3492014585339	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGGGGTGTGTTGTCTTC	NA	False	NA	-1	True	AATAAA	-20	NA	25730901	25644568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
Isoform_175596_5	chr8	-	5115	3	ISM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	-31	23832	-31	4138	5prime_fragment	FALSE	canonical	0	0	junction_2	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATCTGGTCCAGCGTG	NA	False	NA	NA	False	AATAAA	-9	NA	25691589	25668399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_25672947_25690106_25690223_25691137
Isoform_175597_8	chr8	-	5038	3	ISM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	47	23831	-46	4139	5prime_fragment	FALSE	canonical	0	0	junction_2	16.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCTGGTCCAGCGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	25691511	25668398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_25672947_25690106_25690223_25691137
Isoform_175598_3	chr8	-	2113	11	FSM	ENSMUSG00000037363.10	ENSMUST00000079160.8	2126	11	21	-8	-4	8	multi-exon	TRUE	canonical	0	0	junction_10	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAATGGCTTCCTGTTTGTG	2370	False	NA	NA	False	CATAAA	-23	NA	26087508	26068497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26068821_26069735_26069811_26070331_26070425_26071688_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084183_26086377_26086462_26087135
Isoform_175599_5	chr8	-	1978	11	NIC	ENSMUSG00000037363.10	novel	2126	11	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	3.68239052790439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGTTCGAATGGCTTC	2341	False	NA	NA	False	CATAAA	-14	NA	26087537	26068506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_26068821_26069735_26069811_26070331_26070425_26071688_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084183_26086377_26086462_26087290
Isoform_175601_22	chr8	-	4367	18	FSM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	-123	2	10	-2	multi-exon	FALSE	canonical	3	20	junction_17	11.1150012413475	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATGTGGCCTTATCTA	NA	False	NA	-5	True	AATAAA	-20	NA	26244431	26215374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
Isoform_175603_50	chr8	-	4284	18	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	1	18	junction_17	11.4631952042464	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGGCCTTATCTAT	NA	False	NA	-4	True	AATAAA	-21	NA	26244428	26215373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
Isoform_175607_143	chr8	-	2144	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	76	2656	-13	2317	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGGACATTCTTTG	NA	False	NA	1	True	NA	NA	NA	26275239	26257221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
Isoform_175609_627	chr8	-	4772	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	102	2	13	-2	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTGTTTTCTCTCTAG	NA	False	NA	NA	False	AATAAA	-23	NA	26275213	26254567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
Isoform_175613_56	chr8	-	2201	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	77	2598	-12	2375	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTAAGAAAAATATTTT	NA	False	NA	59	True	GATAAA	-19	NA	26275238	26257163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
Isoform_175650_304	chr8	-	2411	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	17	879	0	1	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTACTTGGCTTCACTGGA	NA	False	NA	-11	True	AATAAA	-20	NA	26330798	26306902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
Isoform_175656_3330	chr8	-	2329	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	9	-1	9	1	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTACTTGGCTTCACTGGA	NA	False	NA	-11	True	AATAAA	-20	NA	26337713	26306902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
Isoform_175659_82	chr8	-	3193	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	9	-865	9	-15	multi-exon	TRUE	canonical	3	3119	junction_12	186.058007680998	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGAAAGAAATTTCC	NA	False	NA	NA	False	NA	NA	NA	26337713	26306038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
Isoform_175683_237	chr8	-	2527	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	-19	186	-19	-186	multi-exon	FALSE	canonical	3	85	junction_10	15.0390495171943	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGTCTGATTTTATT	NA	False	NA	-22	True	TATAAA	-20	NA	26466800	26434666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
Isoform_175684_44	chr8	-	2688	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	1	5	1	-5	multi-exon	FALSE	canonical	3	85	junction_10	15.0390495171943	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTCTCGTTACAGCTC	NA	False	NA	NA	False	AATATA	-15	NA	26466780	26434485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
Isoform_175686_28	chr8	-	4681	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	-9	-1978	-9	1978	multi-exon	FALSE	canonical	3	85	junction_10	15.0390495171943	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAATGATGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	26466790	26432502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
Isoform_175690_240	chr8	-	2767	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	25	821	25	-821	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26484136	26471452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
Isoform_175695_24	chr8	-	3265	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	10	-821	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	52.4404424085076	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26484151	26471452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479769_26484114
Isoform_175699_1164	chr8	-	1629	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	52	249	52	149	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	1164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTCCATAGTGTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	26505626	26488998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
Isoform_175705_26	chr8	-	2580	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	24	10232	24	-1	multi-exon	FALSE	canonical	3	25	junction_6	10.5632744184703	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTTCTTTGTATGAA	NA	False	NA	NA	False	ATTAAA	-20	NA	26609228	26521680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
Isoform_175708_24	chr8	-	5021	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	21	7794	21	2437	multi-exon	FALSE	canonical	3	25	junction_6	10.5632744184703	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCATCCGTCTATACTT	NA	False	NA	NA	False	AATAAA	-22	NA	26609231	26519242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
Isoform_175710_4	chr8	-	5041	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	-3	7798	-3	2433	multi-exon	FALSE	canonical	3	25	junction_6	10.5632744184703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATAGCATCCGTCTAT	NA	False	NA	NA	False	AATAAA	-18	NA	26609255	26519246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
Isoform_175713_31	chr8	-	1425	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	7	467	7	374	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGACTCTTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	27618701	27613858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
Isoform_175714_25	chr8	-	1910	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	7	-18	7	18	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTTTCTTTGGCAC	NA	False	NA	-8	True	TATAAA	-14	NA	27618701	27613373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
Isoform_175715_51	chr8	-	1392	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	39	468	-9	373	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGACTCTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	27618669	27613859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
Isoform_175716_42	chr8	-	1854	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	48	-3	0	3	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAGAGCTTTTAAAATG	NA	False	NA	-23	True	ATTAAA	-38	NA	27618660	27613388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
Isoform_175717_4	chr8	-	1818	4	FSM	ENSMUSG00000031487.6	ENSMUST00000210230.2	620	4	-44	-1154	-3	18	multi-exon	FALSE	canonical	2	6	junction_3	38.1255236758206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTTTCTTTGGCAC	NA	False	NA	-8	True	TATAAA	-14	NA	27618685	27613373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618524
Isoform_175718_5	chr8	-	2205	6	NIC	ENSMUSG00000031488.15	novel	3769	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.0242028187311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATCTCCCAGCGTTTTG	NA	False	NA	-4	True	NA	NA	NA	27664674	27633056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_27633423_27639063_27639123_27640722_27640832_27644173_27644964_27646254_27646698_27664236
Isoform_175720_28	chr8	-	3712	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	0	4253	0	2	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCCAGCGTTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	27664674	27633053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
Isoform_175721_8	chr8	-	5897	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	3	2065	-2	1120	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTCTGAAAATGTACAT	NA	False	NA	62	True	TATAAA	-16	NA	27664671	27630865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
Isoform_175722_90	chr8	-	4333	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	7	-1123	2	1123	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGAAAATGTACATGTA	NA	False	NA	65	True	TATAAA	-19	NA	27664667	27630862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
Isoform_175723_147	chr8	-	2144	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	5	1068	0	2	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCCAGCGTTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	27664669	27633053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
Isoform_175724_6	chr8	-	4402	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	-29	-1156	-29	1156	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTGGGGTTTTGGTTTG	NA	False	NA	98	True	NA	NA	NA	27664703	27630829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
Isoform_175727_10	chr8	-	2204	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	-56	1069	-56	1	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCCCAGCGTTTTGTT	NA	False	NA	-2	True	NA	NA	NA	27664730	27633054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
Isoform_17573_3928	chr11	-	2329	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	38	1192	0	1	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	3928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGAAATTGTACTTT	9654	False	NA	-8	True	AATAAA	-18	NA	106679320	106672372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
Isoform_175733_13	chr8	-	1404	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	28.2016547977833	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713848	27687487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692492_27713715
Isoform_175734_68	chr8	-	1566	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_6	20.0831604418561	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713821	27687486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
Isoform_175736_3	chr8	-	1561	10	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	26.9791872229294	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTGCTATGTTCTCC	NA	False	NA	-9	True	AATAAA	-15	NA	27713823	27687488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689971_27690260_27690373_27690749_27690932_27692399_27692680_27713715
Isoform_175737_3	chr8	-	2121	9	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_8	29.3297523855896	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713856	27687486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692492_27713715
Isoform_175738_9	chr8	-	2277	9	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	34	2	intron_retention	FALSE	canonical	3	68	junction_5	19.8899314981224	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTATGTTCTCCTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	27713822	27687484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
Isoform_175739_3	chr8	-	2410	8	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	36	junction_7	28.8097205817759	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713860	27687486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27690373_27690749_27690932_27692399_27692492_27713715
Isoform_17574_1598	chr11	-	3520	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	38	1	0	-1	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	-9	True	AATAAA	-17	NA	106679320	106671181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
Isoform_175741_3	chr8	-	2123	9	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-5	2	intron_retention	FALSE	canonical	3	36	junction_8	34.679785178112	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTATGTTCTCCTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	27713861	27687484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27689971_27690260_27690373_27690749_27690932_27692399_27692492_27713715
Isoform_175745_24	chr8	-	1077	3	FSM	ENSMUSG00000031489.16	ENSMUST00000121838.2	1864	3	1012	-225	923	0	multi-exon	FALSE	canonical	3	73	junction_1	27.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27717599	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_27716498_27716753_27716822_27717284
Isoform_175749_9	chr8	-	2878	6	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-257	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_4	41.735356713463	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27740901	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719313_27739175_27739238_27740517
Isoform_175750_6	chr8	-	2536	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	48.5045100995773	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27730318	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719313_27730214
Isoform_175752_3	chr8	-	2333	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	48.2234382847179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAAGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	27730318	27716027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719334_27730214
Isoform_175753_3	chr8	-	1168	3	NIC	ENSMUSG00000031489.16	novel	1864	3	NA	NA	935	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	26.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27717587	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_27716498_27716753_27716925_27717284
Isoform_175754_3	chr8	-	1160	3	ISM	ENSMUSG00000031489.16	ENSMUST00000081438.10	2795	4	1992	1	898	-1	3prime_fragment	FALSE	canonical	1	3	junction_1	62.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTCCCCTGCTCGCCT	NA	False	NA	-13	True	AATAAA	-14	NA	27717624	27715804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_27716557_27716753_27716822_27717284
Isoform_175755_3	chr8	-	2139	3	ISM	ENSMUSG00000031489.16	ENSMUST00000081438.10	2795	4	1014	0	9	0	3prime_fragment	FALSE	canonical	1	3	junction_1	62.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27718602	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_27716557_27716753_27716822_27717284
Isoform_175756_3	chr8	-	604	2	ISM	ENSMUSG00000031489.16	ENSMUST00000211346.2	669	4	-276	20550	-276	-19773	5prime_fragment	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAACCAAGAAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	27740920	27739036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_27739238_27740517
Isoform_175762_863	chr8	-	1895	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	4	3	3	-3	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	863	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGGTCTTGAGAATT	NA	False	NA	-5	True	TATAAA	-17	NA	31658788	31649493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
Isoform_175775_24	chr8	-	6332	35	NNC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	1	6	at_least_one_novel_splicesite	TRUE	non_canonical	2	19	junction_1	7.797002795636	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGATATGATTATATA	NA	False	NA	NA	False	NA	NA	NA	33875535	33724405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_33724608_33724633_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
Isoform_175777_3	chr8	-	6211	35	NNC	ENSMUSG00000031583.14	novel	6262	34	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_34	9.0723733651955	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCCTCAGATATGAT	NA	False	NA	NA	False	NA	NA	NA	33875530	33724411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_33724608_33724633_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875479
Isoform_175779_79	chr8	-	1639	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	1	1168	1	-1168	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTCTTAAGGTATCTT	4671	False	NA	-1	True	NA	NA	NA	34131994	34110781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
Isoform_175780_86	chr8	-	1380	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	4	1424	4	-1424	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAATGTGAACTGTCG	4674	False	NA	-1	True	AGTAAA	-23	NA	34131991	34111037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
Isoform_175785_6	chr8	-	3566	9	NNC	ENSMUSG00000052906.8	novel	2808	8	NA	NA	21	827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.4074291250492	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTGAAAGGATGCAACTA	4691	False	NA	NA	False	AATAAA	-28	NA	34131974	34108786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_34110013_34110060_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
Isoform_175786_7	chr8	-	3639	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	-8	-823	-8	823	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCCTGAAAGGATGCA	4662	False	NA	NA	False	AATAAA	-24	NA	34132003	34108790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
Isoform_175791_94	chr8	-	2581	9	FSM	ENSMUSG00000031586.18	ENSMUST00000191473.7	2547	9	-33	-1	-11	0	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34419902	34272670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_175794_23	chr8	-	1272	9	FSM	ENSMUSG00000031586.18	ENSMUST00000182987.8	1385	9	-170	283	-123	0	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTAAGAAATGTGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	34420014	34274091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_1758_3	chr10	-	3119	25	FSM	ENSMUSG00000037370.14	ENSMUST00000105520.8	6777	25	161	3497	0	24	multi-exon	FALSE	canonical	0	0	junction_2	1.10554159678513	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGGAAAATGGTT	7908	False	NA	NA	False	AATAAA	-38	NA	24587895	24517308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_24517875_24521175_24521339_24523050_24523184_24523914_24523996_24525141_24525272_24527142_24527295_24528732_24528785_24529800_24529968_24530785_24530874_24531700_24531771_24533002_24533131_24533736_24533769_24536047_24536180_24537764_24537874_24540452_24540526_24540808_24540875_24544906_24545017_24545577_24545698_24545840_24545921_24547912_24548011_24550512_24550574_24551875_24552002_24553810_24553928_24555085_24555159_24587703
Isoform_175805_321	chr8	-	2427	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	39	0	-8	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34419852	34272670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_175808_71	chr8	-	2589	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	-123	0	-123	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34420014	34272670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_175811_304	chr8	-	1044	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	1	1421	1	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTAAGAAATGTGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	34419890	34274091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_175820_175	chr8	-	1073	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	-53	19	5	-19	multi-exon	FALSE	canonical	3	456	junction_1	404.856524654791	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGGTCTCAAGTA	NA	False	NA	-26	True	AATAAA	-17	NA	34419886	34293985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_175824_25	chr8	-	1201	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	-181	19	-123	-19	multi-exon	FALSE	canonical	3	456	junction_1	404.856524654791	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGGTCTCAAGTA	NA	False	NA	-26	True	AATAAA	-17	NA	34420014	34293985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_175831_261	chr8	-	904	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	346	-1	13	1	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTGCCTCAATTTCCA	NA	False	NA	-2	True	AATAAA	-29	NA	34575604	34557575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
Isoform_175832_21	chr8	-	951	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	299	-1	-20	1	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTGCCTCAATTTCCA	NA	False	NA	-2	True	AATAAA	-29	NA	34575651	34557575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
Isoform_175834_119	chr8	-	2639	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	239	1	239	-1	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGCTTGTGGGTGTTT	9025	False	NA	-5	True	AATAAA	-15	NA	34613948	34602726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
Isoform_175837_151	chr8	-	676	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	238	1965	238	-1965	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTGGCTGGTTTCCC	9024	False	NA	-7	True	ATTAAA	-18	NA	34613949	34604690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
Isoform_17584_72	chr11	-	2468	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	1103.10076146326	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGAAATTGTACTTT	9276	False	NA	-8	True	AATAAA	-18	NA	106679698	106672372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
Isoform_175847_166	chr8	-	9160	27	FSM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	2	1	2	-1	multi-exon	FALSE	canonical	3	108	junction_19	17.0294297993192	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTGTGTAGCATTCAG	NA	False	NA	-18	True	AATAAA	-14	NA	35432842	35293614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
Isoform_175851_17	chr8	-	2674	13	ISM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	0	30325	0	-19030	5prime_fragment	FALSE	canonical	3	108	junction_5	17.2841851284796	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTCCCCTTCCTCTCTG	NA	False	NA	0	True	NA	NA	NA	35432844	35323938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
Isoform_175858_202	chr8	-	3074	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	22	1983	22	-1983	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTCATTGGCATTGCCT	NA	False	NA	-8	True	ATTAAA	-23	NA	35962665	35934389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
Isoform_175860_88	chr8	-	4004	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	1	1074	1	-1074	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTTTCTCTCCACT	NA	False	NA	0	True	ATTAAA	-20	NA	35962686	35933480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
Isoform_175878_225	chr8	-	3751	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	179	0	179	0	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCCCCCCCCTTTAAAT	NA	False	NA	-2	True	AATAAA	-15	NA	36716491	36683217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
Isoform_175880_36	chr8	-	3795	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	137	-2	137	2	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCCCCCTTTAAATCG	NA	False	NA	0	True	AATAAA	-17	NA	36716533	36683215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
Isoform_175881_4	chr8	-	3824	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	179	-73	179	73	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATGTGTTTATTTGTC	NA	False	NA	71	True	AATACA	-23	NA	36716491	36683144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
Isoform_175888_10	chr8	-	6157	14	FSM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	5	-3	5	3	multi-exon	TRUE	canonical	3	9	junction_4	11.0077971289962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTGATTGAATTTGCT	NA	False	NA	-10	True	NA	NA	NA	37081092	37034901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
Isoform_17589_110	chr11	-	3646	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	8973	False	NA	-8	True	AATAAA	-18	NA	106680001	106671180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
Isoform_175890_11	chr8	-	2744	9	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	37	9283	-32	-4889	5prime_fragment	FALSE	canonical	3	12	junction_1	10.7985820828477	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATCAGATGCAAGGGG	NA	False	NA	NA	False	NA	NA	NA	37081060	37044187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
Isoform_175892_23	chr8	-	4893	6	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	38	12226	-31	-7832	5prime_fragment	FALSE	canonical	3	26	junction_4	7.49933330370107	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACACATTCCTATGACA	NA	False	NA	NA	False	NA	NA	NA	37081059	37047130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
Isoform_175900_651	chr8	-	2578	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	35	2	-1	0	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964760	40945582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
Isoform_175910_43	chr8	-	724	3	FSM	ENSMUSG00000031601.17	ENSMUST00000146280.2	726	3	3	-1	-1	1	multi-exon	FALSE	canonical	3	487	junction_2	66.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTTAGTTATAGAGAT	NA	False	NA	-3	True	AATAAA	-16	NA	40964760	40960357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_40960690_40963055_40963268_40964580
Isoform_175915_377	chr8	-	2495	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-5	-2	-5	2	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAATCATTTTATTT	NA	False	NA	40	True	AATAAA	-25	NA	41087824	41004139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
Isoform_175918_122	chr8	-	3448	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-5	-955	-5	949	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTTAAAGTGTGAAAAT	NA	False	NA	-3	True	AATAAA	-32	NA	41087824	41003186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
Isoform_175919_23	chr8	-	2525	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-35	-2	-14	2	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAATCATTTTATTT	NA	False	NA	40	True	AATAAA	-25	NA	41087854	41004139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
Isoform_175921_9	chr8	-	3482	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-54	-940	-33	934	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTTTATAACAGTACT	NA	False	NA	-18	True	AATAAA	-17	NA	41087873	41003201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
Isoform_175922_10	chr8	-	3657	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	30	-1199	13	1193	multi-exon	TRUE	canonical	3	263	junction_13	15.5985130530912	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGCATTTTCTGTTGG	NA	False	NA	NA	False	AATAAA	-26	NA	41087789	41002942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
Isoform_175928_11	chr8	-	2355	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_12	79.1157731148192	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTAATCATTTTAT	NA	False	NA	38	True	AATAAA	-23	NA	41087809	41004141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41087740
Isoform_175935_4	chr8	-	3638	10	FSM	ENSMUSG00000045636.17	ENSMUST00000051379.14	3964	10	-37	363	-37	-363	multi-exon	FALSE	canonical	3	9	junction_9	37.6133677314165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCAGCCTCTGACATAC	NA	False	NA	0	True	AATAAA	-25	NA	41494940	41444451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41494509
Isoform_175937_8	chr8	-	6230	15	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-34	-364	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	38.0332829538143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAGCCTCTGACATA	NA	False	NA	-1	True	AATAAA	-24	NA	41586797	41444452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586517
Isoform_175939_37	chr8	-	6574	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-30	4	-30	0	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATCTTGAGTCCTTGC	NA	False	NA	-6	True	TATAAA	-41	NA	41586793	41443954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
Isoform_175941_49	chr8	-	6080	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-35	503	-35	-365	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGCAGCCTCTGACAT	NA	False	NA	-2	True	AATAAA	-23	NA	41586798	41444453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
Isoform_175945_3	chr8	-	6387	14	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-21	-2	combination_of_known_junctions	TRUE	canonical	3	11	junction_13	31.6824107026122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCTTGAGTCCTTGCTT	NA	False	NA	-4	True	TATAAA	-43	NA	41586784	41443952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
Isoform_175946_6	chr8	-	5944	14	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-324	-367	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	31.6824107026122	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGCAGCCTCTGAC	NA	False	NA	-4	True	AATAAA	-21	NA	41587087	41444455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940
Isoform_175947_5	chr8	-	6451	14	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-331	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	31.6824107026122	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATCTTGAGTCCTTG	NA	False	NA	-7	True	TATAAA	-40	NA	41587094	41443955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940
Isoform_175949_5	chr8	-	7114	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-29	-369	intron_retention	FALSE	canonical	3	90	junction_12	16.4738850575354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAATGGCAGCCTCTG	NA	False	NA	-6	True	AATAAA	-19	NA	41586792	41444457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
Isoform_17595_132	chr11	-	3593	12	FSM	ENSMUSG00000020719.15	ENSMUST00000133426.8	3593	12	0	0	0	0	multi-exon	FALSE	canonical	3	3830	junction_7	165.368159266449	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106673083_106673294_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
Isoform_175962_99	chr8	-	2201	14	NIC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-11	15	combination_of_known_junctions	FALSE	canonical	3	76	junction_13	375.853820885935	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGGGTGTGTGCCT	7628	False	NA	-6	True	AATAAA	-33	NA	41827683	41793682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827542
Isoform_175963_585	chr8	-	2207	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	106	460	-32	4	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCATGCATGCTGACTG	7607	False	NA	-17	True	AATAAA	-22	NA	41827704	41793693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
Isoform_175964_1753	chr8	-	2186	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	128	459	-10	5	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCATGCATGCTGACTGG	7629	False	NA	-16	True	AATAAA	-23	NA	41827682	41793692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
Isoform_175985_176	chr8	-	1091	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	-51	-1	-51	1	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTCTCGAGTCCTTTT	NA	False	NA	-6	True	AATAAA	-24	NA	41870162	41850494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
Isoform_175986_243	chr8	-	1052	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	-12	-1	-12	1	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTCTCGAGTCCTTTT	NA	False	NA	-6	True	AATAAA	-24	NA	41870123	41850494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
Isoform_175993_11	chr8	-	1817	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	-1	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_5	54.8005660629188	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633351	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43633233
Isoform_175994_10	chr8	-	1840	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_7	57.3389047680543	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43618053_43618097_43633233
Isoform_175996_3	chr8	-	2018	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	76.9487451164735	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633351	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43633233
Isoform_175997_9	chr8	-	2031	10	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38798	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_8	71.0164300238567	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633321	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43618053_43618097_43633233
Isoform_175998_5	chr8	-	1446	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38827	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	84.5113010194495	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633350	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43633233
Isoform_1760_106	chr10	-	2304	8	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_5	10.3430939199417	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	0	True	AATAAA	-19	NA	25172976	25044987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
Isoform_176000_19	chr8	-	1460	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_6	46.881647676771	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43633233
Isoform_176001_13	chr8	-	1503	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	54.6308576927445	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43618053_43618097_43633233
Isoform_176004_9	chr8	-	1800	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	60.6010709139564	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43594003_43594341_43595725_43595759_43633233
Isoform_176005_3	chr8	-	1843	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	61.2265261140953	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43594003_43594341_43595725_43595759_43618053_43618097_43633233
Isoform_176007_4	chr8	-	2005	10	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38769	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_8	72.4534759196514	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633292	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43618053_43618097_43633233
Isoform_176008_14	chr8	-	1463	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	56.917093702644	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43633233
Isoform_176010_10	chr8	-	1486	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38788	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	60.6835216176382	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633311	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43618053_43618097_43633233
Isoform_176011_3	chr8	-	1666	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38810	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	82.7612745879893	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633333	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43597362_43597564_43633233
Isoform_176012_8	chr8	-	1566	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	70.9305215608125	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43594003_43594341_43595725_43595759_43633233
Isoform_176013_3	chr8	-	1196	5	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	104.60043020944	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43633233
Isoform_176014_6	chr8	-	1190	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38769	-1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	72.7532817129234	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633292	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43595725_43595759_43633233
Isoform_176015_3	chr8	-	1211	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38770	-1	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_2	73.3277573637705	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633293	43582844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43583726_43589312_43589411_43593679_43593776_43595725_43595759_43618053_43618097_43633233
Isoform_176029_208	chr8	-	1781	4	FSM	ENSMUSG00000051176.7	ENSMUST00000209356.2	1744	4	-41	4	-11	0	multi-exon	FALSE	canonical	3	204	junction_3	1933.09774426667	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760028	43748103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_43749574_43753664_43753743_43757512_43757595_43759877
Isoform_176037_4274	chr8	-	1783	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	4274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760028	43748103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
Isoform_176039_91	chr8	-	2636	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-11	-853	-11	849	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTCATTTTTATTTCT	NA	False	NA	-12	True	CATAAA	-19	NA	43760028	43747250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
Isoform_176054_257	chr8	-	1827	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	1062	0	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_3	1920.37050823243	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43758911	43748103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758716
Isoform_176090_8	chr8	-	942	3	FSM	ENSMUSG00000110231.2	ENSMUST00000209210.2	936	3	-3	-3	-3	3	multi-exon	FALSE	canonical	3	13	junction_1	4	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAACTGACTCTTCTT	NA	False	NA	NA	False	AGTAAA	-20	NA	45618259	45613527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_45614092_45614492_45614559_45617947
Isoform_176091_3	chr8	-	2473	2	FSM	ENSMUSG00000050914.17	ENSMUST00000144525.2	416	2	-1997	-60	2	-3	multi-exon	FALSE	canonical	3	53	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTGCATTCTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	46452902	46449941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_46450163_46450650
Isoform_176092_20	chr8	-	918	5	FSM	ENSMUSG00000050914.17	ENSMUST00000053558.10	927	5	2	7	2	2	multi-exon	FALSE	canonical	3	27	junction_4	16.393596310755	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAATTTCTGTGCATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	46452902	46449945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452653
Isoform_176093_23	chr8	-	699	5	NNC	ENSMUSG00000050914.17	novel	927	5	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_4	13.6083614002568	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAATTTCTGTGCATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	46452925	46449945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452895
Isoform_176094_95	chr8	-	3737	19	FSM	ENSMUSG00000038291.17	ENSMUST00000110378.9	3445	19	-312	20	-312	-9	multi-exon	TRUE	canonical	3	42	junction_13	6.48288344625891	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATAAAAATGAATCACA	NA	False	NA	NA	False	NA	NA	NA	46605508	46486317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
Isoform_176109_4303	chr8	-	1120	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	257	548	3	-548	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	4303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCTTCATTGAGTA	NA	False	NA	-6	True	GATAAA	-26	NA	46664064	46660381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
Isoform_176110_3784	chr8	-	1292	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	257	376	3	-376	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	3784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATCTCCCTGCCCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	46664064	46660209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
Isoform_176119_4	chr8	-	3246	15	FSM	ENSMUSG00000038225.16	ENSMUST00000040468.16	3772	15	-20	546	-8	-3	multi-exon	FALSE	canonical	3	14	junction_1	36.5959739059155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATGTGGTGTTTGTGG	NA	False	NA	NA	False	AATACA	-11	NA	47070255	47029199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176121_3	chr8	-	4522	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	37.7032586693208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATATAAAAAAAAC	NA	False	NA	-34	True	NA	NA	NA	47070251	47028652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176122_3	chr8	-	3978	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	37.7032586693208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTGGTGTTTGTGGA	NA	False	NA	NA	False	AATACA	-12	NA	47070253	47029198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176123_3	chr8	-	4315	14	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-1	10	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	46.558736842094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGTGTGTGTTTCTC	NA	False	NA	0	True	AATAAA	-29	NA	47070244	47028618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176124_6	chr8	-	2219	14	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-2	262	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	37.0480257641045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTATGCCTGGTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	47070245	47031635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
Isoform_176125_87	chr8	-	2103	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	-10	-260	-6	260	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCTTATGCCTGGTG	NA	False	NA	-10	True	ATTAAA	-13	NA	47070253	47031637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176126_6	chr8	-	5121	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	-8	-3280	-4	11	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGTGTGTGTTTCTCG	NA	False	NA	1	True	AATAAA	-30	NA	47070251	47028617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176128_11	chr8	-	2002	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-1	262	combination_of_known_splicesites	FALSE	canonical	3	19	junction_10	37.7258937012174	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTATGCCTGGTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	47070248	47031635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
Isoform_176129_22	chr8	-	1868	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-4	261	combination_of_known_splicesites	FALSE	canonical	3	31	junction_7	35.2230984819148	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070251	47031636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176130_13	chr8	-	2817	13	ISM	ENSMUSG00000038225.16	ENSMUST00000136335.8	3943	14	-16	2439	-4	262	5prime_fragment	FALSE	canonical	3	92	junction_6	20.4659269681749	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTATGCCTGGTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	47070251	47031635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176131_8	chr8	-	2088	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-4	261	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	35.660463247878	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070251	47031636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176132_7	chr8	-	2803	13	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-4	262	intron_retention	FALSE	canonical	3	18	junction_6	37.1044883478476	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTATGCCTGGTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	47070251	47031635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_176134_4	chr8	-	1752	2	FSM	ENSMUSG00000038225.16	ENSMUST00000132472.3	1748	2	-6	2	-6	-2	multi-exon	FALSE	canonical	3	123	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-8	NA	47070253	47063814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_47065482_47070168
Isoform_176138_305	chr8	-	4310	30	FSM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	9	13	9	0	multi-exon	TRUE	canonical	3	87	junction_18	20.4181612288351	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4063	False	NA	-10	True	AATAAA	-16	NA	47986493	47943162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
Isoform_176139_5	chr8	-	4642	29	FSM	ENSMUSG00000038102.16	ENSMUST00000125065.8	4646	29	2	2	-1	-2	multi-exon	FALSE	canonical	3	87	junction_17	20.7100980988818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCTGTCGTAAATACC	4053	False	NA	-13	True	AATAAA	-13	NA	47986503	47943165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
Isoform_176140_6	chr8	-	4220	29	NIC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_7	29.5087327095294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4033	False	NA	-10	True	AATAAA	-16	NA	47986523	47943162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
Isoform_176141_6	chr8	-	3646	21	ISM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	1	14129	1	1	5prime_fragment	FALSE	canonical	3	87	junction_9	18.7868970295789	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATATTGATTGTAATA	4055	False	NA	NA	False	NA	NA	NA	47986501	47957278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
Isoform_176142_98	chr8	-	1432	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	34	1346	34	231	multi-exon	FALSE	canonical	3	212	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACCTTAATTTTCTG	NA	False	NA	-13	True	ATTAAA	-16	NA	48128159	48121558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48122372_48127540
Isoform_176149_26	chr8	-	1492	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	-28	1348	-28	229	multi-exon	FALSE	canonical	3	212	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGACCTTAATTTTC	NA	False	NA	-15	True	ATTAAA	-14	NA	48128221	48121560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48122372_48127540
Isoform_176152_23	chr8	-	2646	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	0	166	0	-166	multi-exon	FALSE	canonical	3	212	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCTGTGTGACTTAGG	NA	False	NA	NA	False	AAAAAG	-23	NA	48128193	48120378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48122372_48127540
Isoform_176158_26	chr8	-	2704	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	-96	785	-95	-785	multi-exon	FALSE	canonical	3	65	junction_1	31	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAAGTTGTGTTTTTTT	NA	False	NA	-5	True	ATTAAA	-23	NA	48167062	48163264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48165330_48165922_48166054_48166554
Isoform_176159_100	chr8	-	2610	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	1	782	1	-782	multi-exon	FALSE	canonical	3	65	junction_1	31	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTGTTTTTTTTTC	NA	False	NA	-2	True	ATTAAA	-26	NA	48166965	48163261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48165330_48165922_48166054_48166554
Isoform_176161_7	chr8	-	3433	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	-43	3	-42	-3	multi-exon	FALSE	canonical	3	65	junction_1	31	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTTATTAGATGATTGG	NA	False	NA	NA	False	AATAAA	-15	NA	48167009	48162482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48165330_48165922_48166054_48166554
Isoform_176163_66	chr8	-	2576	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	5	883	4	-782	multi-exon	FALSE	canonical	3	60	junction_1	33.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTGTTTTTTTTTC	NA	False	NA	-2	True	ATTAAA	-26	NA	48166962	48163261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48165330_48165953_48166054_48166554
Isoform_176164_21	chr8	-	3355	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	1	108	0	-7	multi-exon	FALSE	canonical	3	60	junction_1	33.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACATCTTATTAGATGA	NA	False	NA	NA	False	AATAAA	-11	NA	48166966	48162486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48165330_48165953_48166054_48166554
Isoform_176165_7	chr8	-	2643	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	-62	883	-62	-782	multi-exon	FALSE	canonical	3	60	junction_1	33.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTGTTTTTTTTTC	NA	False	NA	-2	True	ATTAAA	-26	NA	48167029	48163261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48165330_48165953_48166054_48166554
Isoform_176174_243	chr8	-	4070	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	9	4599	9	-4599	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTTTCATCAGGTTT	NA	False	NA	-17	True	AATATA	-28	NA	48443577	48281592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
Isoform_176176_49	chr8	-	4093	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	-16	4601	-16	-4601	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACCAGTTTCATCAGGT	NA	False	NA	-19	True	AATATA	-26	NA	48443602	48281594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
Isoform_176178_33	chr8	-	5884	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	9	2785	9	-2785	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGACTGAGGGACTT	NA	False	NA	NA	False	AATAAA	-24	NA	48443577	48279778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
Isoform_176183_52	chr8	-	6498	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	56	2124	56	-2124	multi-exon	TRUE	canonical	3	189	junction_17	22.8505746170765	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATGTTGCTTATTCA	NA	False	NA	-1	True	AATACA	-17	NA	48443530	48279117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
Isoform_17619_8	chr11	-	5413	20	Fusion	ENSMUSG00000018363.17_ENSMUSG00002076856.1	novel	2358	20	NA	NA	30	2	intron_retention	TRUE	canonical	3	9	junction_16	13.0135237562321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACTGAGTTTTTACTTG	NA	False	NA	-4	True	AATAAA	-41	NA	106811511	106710889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106759822_106759935_106762327_106762437_106766726_106766766_106811006
Isoform_176206_6	chr8	-	8551	26	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-35	1	combination_of_known_junctions	FALSE	canonical	3	47	junction_25	12.7658293894286	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTGATTTTTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	49009109	48680715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
Isoform_176207_3	chr8	-	4632	20	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-4	-30	combination_of_known_junctions	FALSE	canonical	3	47	junction_19	13.0230990180234	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCTGTAATTTTTAGA	NA	False	NA	NA	False	AATAGA	-33	NA	49009078	48728979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
Isoform_176208_4	chr8	-	2294	10	NIC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	-46	-20	combination_of_known_junctions	FALSE	canonical	3	47	junction_9	13.5355042958587	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAGTTTGTTTCTAAA	NA	False	NA	NA	False	CATAAA	-19	NA	49009120	48788247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
Isoform_176209_3	chr8	-	2777	10	NIC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	-77	625	combination_of_known_junctions	FALSE	canonical	3	47	junction_9	13.5355042958587	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGTTTCTACCTCACC	NA	False	NA	NA	False	ATTAAA	-13	NA	49008958	48787602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
Isoform_176210_49	chr8	-	2192	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	61	0	-38	0	multi-exon	FALSE	canonical	3	23	junction_4	6.19039478985961	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54092039	54039901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
Isoform_176214_10	chr8	-	3446	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	423.496753234308	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTTATGTGTTTTTG	NA	False	NA	-3	True	AATAAA	-39	NA	54983011	54973466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_54976431_54977975_54978092_54979485_54979563_54981375_54981451_54982797
Isoform_176215_8	chr8	-	2183	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	3	-1	intron_retention	FALSE	canonical	3	38	junction_10	43.2676553559353	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTATATGTGCCGATTT	NA	False	NA	-6	True	AATAAA	-17	NA	57003904	56984557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097
Isoform_176216_8	chr8	-	1732	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	55.4532041566551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTATATGTGCCGATTT	NA	False	NA	-6	True	AATAAA	-17	NA	57003876	56984557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097_57003157_57003579
Isoform_176217_12	chr8	-	1614	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	54.5031654247927	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003902	56984558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097_57003157_57003722
Isoform_176218_41	chr8	-	1649	11	FSM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	39	2	-15	-2	multi-exon	FALSE	canonical	3	35	junction_10	43.9777216326631	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003853	56984558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003579
Isoform_176219_44	chr8	-	1555	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	38.0914688611505	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003902	56984558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
Isoform_17622_23	chr11	-	5362	19	FSM	ENSMUSG00000018363.17_ENSMUSG00002076856.1	ENSMUST00000092517.9	3125	19	-278	-1959	13	0	multi-exon	FALSE	canonical	3	28	junction_17	7.74038631121946	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATACTGAGTTTTTACT	NA	False	NA	-6	True	AATAAA	-39	NA	106811574	106710891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
Isoform_176220_3	chr8	-	3428	10	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	5	-1	intron_retention	FALSE	canonical	3	61	junction_9	40.0484274748694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTATATGTGCCGATTT	NA	False	NA	-6	True	AATAAA	-17	NA	57003902	56984557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
Isoform_176224_3328	chr8	-	1159	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	20	-1	20	1	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	3328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCTTCAGCCTGTTTA	NA	False	NA	98	True	AATAAA	-15	NA	57940874	57935739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
Isoform_176225_172	chr8	-	1198	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	-17	-3	-17	3	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTCAGCCTGTTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	57940911	57935737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
Isoform_176232_129	chr8	-	4318	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	-4	-1	-3	1	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	-2	True	AATAAA	-19	NA	58106069	57976860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
Isoform_176238_191	chr8	-	4317	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	-31	-873	-2	1	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	-2	True	AATAAA	-19	NA	58106068	57976860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
Isoform_17624_3	chr11	-	5312	18	FSM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	-33	11	-33	-11	multi-exon	FALSE	canonical	2	5	junction_17	11.382314941417	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGGTTTGTAAGAATACT	NA	False	NA	-17	True	AATAAA	-28	NA	106811574	106710902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106811006
Isoform_176241_7	chr8	-	3853	11	NIC	ENSMUSG00000031608.14	novel	3413	12	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	50.6782991032651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCAGTGCTTGTAATT	NA	False	NA	0	True	AATAAA	-21	NA	58106063	57976858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58105886
Isoform_176244_14	chr8	-	5754	14	FSM	ENSMUSG00000004319.16	ENSMUST00000004430.14	4175	14	-51	-1528	-4	-6	multi-exon	FALSE	canonical	3	31	junction_1	79.7742376590516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGGTTTGGCTTTTA	NA	False	NA	-7	True	ATTAAA	-12	NA	61436324	61363428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
Isoform_176248_12	chr8	-	5579	13	NIC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	80.1138079373476	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436319	61363422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
Isoform_176261_143	chr8	-	5633	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-6	-1528	-1	-6	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGGTTTGGCTTTTA	NA	False	NA	-7	True	ATTAAA	-12	NA	61436279	61363428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
Isoform_176262_15	chr8	-	4157	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-31	-27	16	0	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACCTTTTTAATGTGAC	NA	False	NA	NA	False	ATTAAA	-41	NA	61436304	61364929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
Isoform_176268_145	chr8	-	5463	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	55	0	-1	0	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436279	61363422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
Isoform_176269_24	chr8	-	4007	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	17	1494	3	13	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGACTTTTTTTAATAGA	NA	False	NA	NA	False	TATAAA	-45	NA	61436317	61364916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
Isoform_17627_36	chr11	-	1948	11	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-6	combination_of_known_junctions	FALSE	canonical	3	138	junction_10	946.562882221778	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACTTGCTGTTTTCTT	9745	False	NA	NA	False	AATAAA	-21	NA	106890288	106879460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888141_106890184
Isoform_176272_17	chr8	-	5161	12	NNC	ENSMUSG00000004319.16	novel	5684	12	NA	NA	-10222	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	65.6371191092257	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGGTTTGGCTTTTA	NA	False	NA	-7	True	ATTAAA	-12	NA	61418489	61363428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61418315
Isoform_176275_7	chr8	-	872	3	FSM	ENSMUSG00000004319.16	ENSMUST00000145493.2	3462	3	-27	2617	-13	-2617	multi-exon	FALSE	canonical	3	96	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACTTTCAGCATTTT	NA	False	NA	NA	False	NA	NA	NA	61436347	61394290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_61394449_61428765_61428942_61435809
Isoform_17628_800	chr11	-	1976	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	78	0	-13	0	multi-exon	FALSE	canonical	3	2002	junction_5	417.039386629129	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9744	False	NA	NA	False	AATAAA	-27	NA	106890289	106879454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
Isoform_176282_59	chr8	-	3227	8	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	57542	-2	241	2	3prime_fragment	FALSE	canonical	3	101	junction_4	7.79848232226067	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGGCCCTCTGTGATGT	NA	False	NA	-6	True	AATAAA	-19	NA	61986634	61964464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387
Isoform_176289_67	chr8	-	4254	12	FSM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	-62	1	-62	-1	multi-exon	FALSE	canonical	3	58	junction_8	23.5231554638234	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGGCCCTCTGTGA	NA	False	NA	-9	True	AATAAA	-16	NA	62044238	61964467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62044093
Isoform_17629_113	chr11	-	2004	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	44	6	44	-6	multi-exon	FALSE	canonical	3	2002	junction_5	417.039386629129	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACTTGCTGTTTTCTT	9710	False	NA	NA	False	AATAAA	-21	NA	106890323	106879460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
Isoform_176298_3	chr8	-	3026	4	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	-65	22285	-65	-8597	5prime_fragment	FALSE	canonical	3	65	junction_2	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62044241	61986751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_61988819_61991721_61991858_62002604_62003280_62044093
Isoform_1763_3	chr10	-	2005	6	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	21015	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	50.2736511504784	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTCTTTTCTTTC	NA	False	NA	-1	True	AATAAA	-18	NA	25150983	25044988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25150849
Isoform_176300_85	chr8	-	2103	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	-1	15	-1	-15	multi-exon	FALSE	canonical	3	35	junction_4	3.34477204006491	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCCCA	NA	False	NA	NA	False	AATAAA	-5	NA	65146089	65045590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
Isoform_176306_796	chr8	-	1826	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	216	2	2	-2	multi-exon	TRUE	canonical	3	690	junction_2	21.3822356174466	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAATGGTTCTGTTTTTT	NA	False	NA	-19	True	ATTAAA	-16	NA	65186610	65171174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
Isoform_176309_17	chr8	-	1677	5	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	300.648777645944	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAATGGTTCTGTTTTTT	NA	False	NA	-19	True	ATTAAA	-16	NA	65186610	65171174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_65172216_65173375_65173531_65175497_65175625_65180657_65180943_65186541
Isoform_176316_184	chr8	-	3177	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	64	171	-29	2	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTTACCAGTGTGAC	NA	False	NA	0	True	AATAAA	-30	NA	65302605	65192879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
Isoform_176318_46	chr8	-	3194	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	41	177	41	-4	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	-6	True	AATAAA	-24	NA	65302628	65192885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
Isoform_176321_5	chr8	-	3407	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	7	-2	7	2	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGGAGTTGTTCTTGGG	NA	False	NA	NA	False	ATTAAA	-15	NA	65302662	65192706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
Isoform_176324_3	chr8	-	3043	14	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-28	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	60.0582557425724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCCTTGGTTTTACCA	NA	False	NA	-7	True	AATAAA	-23	NA	65302604	65192886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65302284
Isoform_176325_250	chr8	-	933	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	15	-3	15	0	multi-exon	FALSE	canonical	3	429	junction_2	5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	-21	True	ATTAAA	-21	NA	65489809	65481068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_65481644_65488316_65488407_65489541
Isoform_176326_72	chr8	-	982	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	-36	-1	-36	1	multi-exon	FALSE	canonical	3	429	junction_2	5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGAGTTTATTGTGT	NA	False	NA	-23	True	ATTAAA	-19	NA	65489860	65481070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_65481644_65488316_65488407_65489541
Isoform_17633_14	chr11	-	2048	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-7	intron_retention	FALSE	canonical	3	2432	junction_9	276.995431615401	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9745	False	NA	NA	False	AATAAA	-20	NA	106890288	106879461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
Isoform_176331_433	chr8	-	993	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-1	3336	1	-2124	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTATGTAAGAATTTG	NA	False	NA	-14	True	AATAAA	-16	NA	66939172	66929105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
Isoform_176332_62	chr8	-	1097	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-1	3232	1	-2020	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAGAGATTGTGTTAG	NA	False	NA	90	True	AATAGA	-42	NA	66939172	66929001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
Isoform_176334_19	chr8	-	4329	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-1	0	1	0	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGTCTGATAACAAA	NA	False	NA	0	True	AATAAA	-17	NA	66939172	66925769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
Isoform_176336_75	chr8	-	1055	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-27	2122	-3	-2122	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATGTAAGAATTTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	66939176	66929103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
Isoform_176337_17	chr8	-	1153	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-23	2020	1	-2020	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAGAGATTGTGTTAG	NA	False	NA	90	True	AATAGA	-42	NA	66939172	66929001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
Isoform_176339_11	chr8	-	4381	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-24	-1207	0	-5	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTTCTGAGTCTGATA	NA	False	NA	-5	True	AATAAA	-12	NA	66939173	66925774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
Isoform_176341_57	chr8	-	2507	6	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	1	-2124	intron_retention	FALSE	canonical	3	740	junction_4	84.295670114188	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTATGTAAGAATTTG	NA	False	NA	-14	True	AATAAA	-16	NA	66939172	66929105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936823_66939063
Isoform_176345_3	chr8	-	3281	5	FSM	ENSMUSG00000110444.3	ENSMUST00000213012.2	7778	5	-17	4514	0	1121	multi-exon	FALSE	canonical	2	5	junction_3	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGTGTGTGTATGTGT	NA	False	NA	NA	False	ATTAAA	-32	NA	69848191	69823675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69829137_69829248_69848092
Isoform_176348_17	chr8	-	5666	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	-16	2018	1	-2018	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGCTTACCTCATCATTT	NA	False	NA	NA	False	AATGAA	-23	NA	69848190	69821179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
Isoform_176350_82	chr8	-	2267	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	-1	-7	-1	7	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTAGTACTCATTTCTT	NA	False	NA	1	True	AATAAA	-30	NA	70078200	70063500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
Isoform_176351_76	chr8	-	2457	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	5	-203	2	203	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCCTCCCATACTTT	NA	False	NA	-25	True	NA	NA	NA	70078194	70063304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
Isoform_176352_3	chr8	-	2621	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	-11	-351	-11	351	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCATCAGTGTACTTTT	NA	False	NA	NA	False	NA	NA	NA	70078210	70063156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
Isoform_176353_18	chr8	-	2440	5	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	375	201	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	46.3215662515852	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTGCCTCCCATACT	NA	False	NA	-27	True	NA	NA	NA	70077821	70063306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70077727
Isoform_176354_18	chr8	-	2246	5	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	375	7	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	46.3215662515852	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTAGTACTCATTTCTT	NA	False	NA	1	True	AATAAA	-30	NA	70077821	70063500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70077727
Isoform_176358_10	chr8	-	3241	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238292.2	6080	5	353	2486	2	-2	multi-exon	FALSE	canonical	3	12	junction_4	30.1029483605842	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169134	70157791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70168933
Isoform_176359_5	chr8	-	3622	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238292.2	6080	5	-28	2486	-6	-2	multi-exon	FALSE	canonical	3	12	junction_4	30.1029483605842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169515	70157791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70168933
Isoform_176360_8	chr8	-	3122	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238460.2	882	5	20	-2260	-3	-2	multi-exon	FALSE	canonical	2	4	junction_4	33.4542598184446	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169116	70157791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169034
Isoform_176361_144	chr8	-	3147	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	28	5	-1	-2	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169524	70157791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
Isoform_176364_12	chr8	-	3314	4	NIC	ENSMUSG00000054648.9	novel	3180	5	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	68	junction_3	10.6770782520313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169524	70157791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70160345_70160760_70161116_70163335_70163635_70169417
Isoform_176365_11	chr8	-	2258	5	NNC	ENSMUSG00000092260.8	novel	2291	4	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.29725975966321	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAATTTGGAAAAGGTAT	9679	False	NA	NA	False	AATAAA	-14	NA	70202605	70194290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_70194376_70194399_70196261_70196841_70196903_70197110_70197238_70202481
Isoform_176367_13	chr8	-	5747	4	FSM	ENSMUSG00000043090.19	ENSMUST00000137573.2	3245	4	16	-2518	16	1	multi-exon	FALSE	canonical	3	29	junction_1	2.44948974278318	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCACTTGTGTCAAATC	6885	False	NA	-8	True	NA	NA	NA	70227545	70213974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70219428_70220282_70220344_70221770_70221898_70227439
Isoform_176373_33	chr8	-	2039	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	-629	-11	-629	11	intron_retention	FALSE	canonical	3	6124	junction_2	115.905133622286	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGACTCTATCGTGGATC	NA	False	NA	-9	True	AATAAA	-28	NA	70355837	70346818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
Isoform_176375_2126	chr8	-	481	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	911	7	911	-7	3prime_fragment	FALSE	canonical	3	6124	junction_2	115.905133622286	2126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGTTGACTCTATA	NA	False	NA	-27	True	AATAAA	-10	NA	70354297	70346836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
Isoform_176391_46	chr8	-	3486	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	298.384399726259	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70427036	70361306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
Isoform_176392_68	chr8	-	3425	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	298.384399726259	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426974	70361305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
Isoform_1764_21	chr10	-	3122	9	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-8	-2	at_least_one_novel_splicesite	TRUE	non_canonical	3	26	junction_2	38.0688110531443	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTCTTCTTTTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	25172979	25044989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_25045562_25045590_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
Isoform_17641_3	chr11	-	360	4	ISM	ENSMUSG00000040481.18	ENSMUST00000057892.15	11488	28	51125	43605	-13592	-16138	internal_fragment	FALSE	canonical	3	14	junction_1	7.36357401145817	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATAAAGATGAGTCAG	1509	False	NA	NA	False	AATACA	-3	NA	106971623	106967511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_106967528_106968485_106968625_106969345_106969476_106971548
Isoform_176414_424	chr8	-	3416	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	-53	0	-53	0	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426974	70361305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
Isoform_176415_307	chr8	-	3478	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	-115	0	-115	0	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70427036	70361305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
Isoform_176422_408	chr8	-	3573	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	50	-1	50	0	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448984	70361305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_176423_112	chr8	-	3622	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	1	-1	1	0	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70449033	70361305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_176456_82	chr8	-	3468	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_6	285.503308017418	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70427024	70361306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
Isoform_176457_133	chr8	-	3421	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_6	285.503308017418	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426976	70361305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
Isoform_176462_53	chr8	-	3576	13	FSM	ENSMUSG00000036180.16	ENSMUST00000065169.12	3812	13	50	186	50	0	multi-exon	FALSE	canonical	3	188	junction_6	322.35922853584	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448984	70361305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_176463_54	chr8	-	3494	13	FSM	ENSMUSG00000036180.16	ENSMUST00000065169.12	3812	13	132	186	-19	0	multi-exon	FALSE	canonical	3	188	junction_6	322.35922853584	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448902	70361305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_17648_28	chr11	-	2721	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	113	264	84	-264	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGCAAAACATCTCTG	1214	False	NA	NA	False	NA	NA	NA	107080094	107057752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_176480_68	chr8	-	3390	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-103	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	313.771143635791	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70427024	70361306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
Isoform_176484_32	chr8	-	3390	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448876	70361305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_176488_36	chr8	-	3290	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	105	-1	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTCACCTGTGTGGAAA	NA	False	NA	-26	True	AATAAA	-15	NA	70448778	70361307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_176504_244	chr8	-	2899	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212451.2	1931	19	35	-1003	1	5	multi-exon	FALSE	canonical	3	104	junction_6	54.8951019875382	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATGTTAGAGTGCTTT	NA	False	NA	0	True	NA	NA	NA	70495349	70471210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_176511_363	chr8	-	2898	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	34	2437	0	6	multi-exon	FALSE	canonical	3	161	junction_6	45.5936155374607	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTAGAGTGCTTTT	NA	False	NA	1	True	NA	NA	NA	70495350	70471209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_176513_15	chr8	-	4243	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	26	1100	-8	-1100	multi-exon	TRUE	canonical	3	161	junction_6	45.5936155374607	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	70495358	70469872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_176516_16	chr8	-	3342	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-11	6	intron_retention	FALSE	canonical	3	161	junction_6	43.9600321777151	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTAGAGTGCTTTT	NA	False	NA	1	True	NA	NA	NA	70495361	70471209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_176518_10	chr8	-	3853	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-7	10	intron_retention	FALSE	canonical	3	216	junction_12	35.9747123796125	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGAGTGCTTTTAGTG	NA	False	NA	5	True	NA	NA	NA	70495357	70471205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_176522_8	chr8	-	2109	12	ISM	ENSMUSG00000031858.17	ENSMUST00000212401.2	4269	17	-8	4718	-8	-43	5prime_fragment	FALSE	canonical	3	224	junction_7	36.158740927396	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTATCTCAAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	70495358	70475933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_176523_12	chr8	-	1258	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	-138	1	-80	-1	multi-exon	FALSE	canonical	2	7	junction_5	20.7590341779188	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTCAGGGTGCCTCCC	9465	False	NA	1	True	AATAAA	-17	NA	70591884	70585916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
Isoform_176524_6	chr8	-	3672	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-51	-12	-51	0	multi-exon	TRUE	canonical	3	42	junction_5	11.7626261948597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTGTTTTGCTTGAGT	9494	False	NA	0	True	ATTAAA	-34	NA	70591855	70583443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
Isoform_176525_4	chr8	-	2313	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-91	1387	-91	1073	multi-exon	FALSE	canonical	3	42	junction_5	11.7626261948597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGCCTTTTTTGTTTGT	9454	False	NA	NA	False	NA	NA	NA	70591895	70584842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
Isoform_176526_47	chr8	-	1232	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-84	2461	-84	-1	multi-exon	FALSE	canonical	3	42	junction_5	11.7626261948597	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTCAGGGTGCCTCCC	9461	False	NA	1	True	AATAAA	-17	NA	70591888	70585916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
Isoform_176530_6	chr8	-	3103	9	FSM	ENSMUSG00000002346.17	ENSMUST00000063788.8	3081	9	-22	0	-22	0	multi-exon	TRUE	non_canonical	0	0	junction_1	10.6389614154766	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTCTTACTTCTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	70664928	70636989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70637876_70637941_70639427_70640949_70641102_70641482_70641600_70642060_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
Isoform_176532_15	chr8	-	2042	8	NIC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	3	-16	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	30.2722341967901	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAATA	5011	False	NA	-42	True	NA	NA	NA	70686773	70672863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686595
Isoform_176533_125	chr8	-	2200	8	FSM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	21	42	4	-16	multi-exon	FALSE	canonical	3	72	junction_3	11.6741472616082	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAATA	4689	False	NA	-42	True	NA	NA	NA	70687095	70672863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
Isoform_176536_7	chr8	-	1365	5	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	32	3262	15	-248	5prime_fragment	FALSE	canonical	3	75	junction_4	11.8822346383161	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTAGGGTCGTGGTT	4700	False	NA	NA	False	AATGAA	-13	NA	70687084	70676083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
Isoform_176539_77	chr8	-	2142	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	18	-23	-8	23	multi-exon	TRUE	canonical	3	250	junction_9	19.6148682268211	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCATGGCTGGCAAGCA	9949	False	NA	-1	True	NA	NA	NA	70755121	70745492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
Isoform_176540_397	chr8	-	1534	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	18	585	-8	135	multi-exon	FALSE	canonical	3	250	junction_9	19.6148682268211	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9949	False	NA	-5	True	AGTAAA	-19	NA	70755121	70746100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
Isoform_176560_172	chr8	-	4635	24	FSM	ENSMUSG00000058301.9	ENSMUST00000075666.8	4618	24	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_1	146.934304983882	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805945	70784174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
Isoform_17657_157	chr11	-	3080	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	79	-1	50	1	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGAAAATGTCTCTCT	1180	False	NA	NA	False	TATAAA	-13	NA	107080128	107057487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_176570_25	chr8	-	4677	25	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-117	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	141.665294110998	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTCCCTGCTTTTGCGT	NA	False	NA	-33	True	AATAAA	-10	NA	70806045	70784178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427_70805815_70805835
Isoform_176571_786	chr8	-	4607	24	FSM	ENSMUSG00000058301.9	ENSMUST00000215817.2	4518	24	-89	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_1	119.404999372875	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805950	70784174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
Isoform_176580_14	chr8	-	4753	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-32	-4	intron_retention	FALSE	canonical	3	421	junction_16	57.309367788902	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTCCCTGCTTTTGCGT	NA	False	NA	-33	True	AATAAA	-10	NA	70805960	70784178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
Isoform_176581_22	chr8	-	2516	14	FSM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	-20	3187	-20	-3187	multi-exon	FALSE	canonical	3	29	junction_8	14.7616166270428	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTATATTCCTGAGC	5193	False	NA	NA	False	AATAAA	-16	NA	70892249	70838191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
Isoform_176583_12	chr8	-	5715	14	FSM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	-32	0	-32	0	multi-exon	FALSE	canonical	3	29	junction_8	14.7616166270428	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTCTTCCTCTTTTTC	5181	False	NA	-4	True	AATAAA	-18	NA	70892261	70835004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
Isoform_176585_4	chr8	-	1454	4	FSM	ENSMUSG00000003575.14	ENSMUST00000125613.8	870	4	-37	-547	-33	547	multi-exon	FALSE	canonical	3	61	junction_2	6.48074069840786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACACAGTGTGGGTGTC	5180	False	NA	-4	True	NA	NA	NA	70892262	70856951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70857971_70858727_70858866_70861544_70861662_70892082
Isoform_176587_4	chr8	-	2915	3	FSM	ENSMUSG00000055707.14	ENSMUST00000210250.2	2974	3	24	35	-20	6	multi-exon	FALSE	canonical	2	11	junction_1	21.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGACCTGTGCTCTACGC	NA	False	NA	-12	True	AATAAA	-22	NA	70929575	70902911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70905568_70908115_70908299_70929499
Isoform_176591_124	chr8	-	3005	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	-15	1	-15	-1	multi-exon	FALSE	canonical	3	54	junction_2	2	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGGAGCAGACCTGTGC	NA	False	NA	-19	True	AATAAA	-15	NA	70929570	70902918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70905670_70908115_70908299_70929499
Isoform_176592_64	chr8	-	3094	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	-53	-50	-8	1	multi-exon	FALSE	canonical	3	54	junction_2	2	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGACCTGTGCCACC	NA	False	NA	32	True	NA	NA	NA	70929608	70902867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70905670_70908115_70908299_70929499
Isoform_176595_17	chr8	-	2869	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	49	-184	-14	-2	multi-exon	FALSE	canonical	3	8	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTGTGACCTGTGCC	NA	False	NA	29	True	NA	NA	NA	70929569	70902870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70905670_70929499
Isoform_176596_19	chr8	-	2872	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	9	-147	-9	10	multi-exon	FALSE	canonical	3	8	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGCTCTACGCCTGC	NA	False	NA	-8	True	AATAAA	-26	NA	70929609	70902907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70905670_70929499
Isoform_176598_5	chr8	-	5489	2	NIC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	54	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGGAGCAGACCTGTG	NA	False	NA	-20	True	AATAAA	-14	NA	70929609	70902919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70908299_70929499
Isoform_176599_14	chr8	-	665	3	FSM	ENSMUSG00000058833.12	ENSMUST00000138196.2	542	3	-20	-103	-16	0	multi-exon	FALSE	canonical	3	841	junction_1	23	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70958778	70956944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70957160_70957633_70957711_70958405
Isoform_17660_290	chr11	-	3041	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	118	-1	89	1	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGAAAATGTCTCTCT	1219	False	NA	NA	False	TATAAA	-13	NA	107080089	107057487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_176602_56	chr8	-	630	4	FSM	ENSMUSG00000058833.12	ENSMUST00000133683.8	632	4	1	1	1	-1	multi-exon	FALSE	canonical	3	147	junction_3	338.518340222013	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCCATCAGCTCTGT	NA	False	NA	-9	True	AATAAA	-16	NA	70959075	70956945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70958941
Isoform_176606_1070	chr8	-	658	5	FSM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	13	0	-2	0	multi-exon	FALSE	canonical	3	754	junction_4	53.0518614188041	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959389	70956944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959311
Isoform_176608_25	chr8	-	581	4	NIC	ENSMUSG00000058833.12	novel	671	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	348.934887272046	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959389	70956944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70957160_70958405_70958611_70959146_70959230_70959311
Isoform_176610_25	chr8	-	677	5	FSM	ENSMUSG00000058833.12	ENSMUST00000136913.2	671	5	-2	-4	-2	0	multi-exon	FALSE	canonical	3	28	junction_1	340.250918441082	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959389	70956944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70957179_70957633_70957711_70958405_70958611_70959146_70959230_70959311
Isoform_176617_651	chr8	-	493	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	50	-2	12	0	multi-exon	FALSE	canonical	3	1892	junction_3	9741.86690983247	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963017	70960913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
Isoform_176619_334	chr8	-	682	4	FSM	ENSMUSG00000090137.9	ENSMUST00000129909.8	705	4	22	1	17	0	multi-exon	FALSE	canonical	0	0	junction_3	10633.6606532694	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70962983	70960913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962767
Isoform_176620_90	chr8	-	710	4	FSM	ENSMUSG00000090137.9	ENSMUST00000129909.8	705	4	-6	1	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	10633.6606532694	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963011	70960913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962767
Isoform_176622_4928	chr8	-	495	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	214	2	12	-1	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	4928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTGTCTAGAGTGACT	NA	False	NA	-6	True	AATAAA	-26	NA	70963017	70960914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
Isoform_176623_1385	chr8	-	527	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	183	1	-19	0	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963048	70960913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
Isoform_17663_16	chr11	-	3597	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	92	-531	63	531	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGAAAAGCCAAGCGG	1193	False	NA	NA	False	NA	NA	NA	107080115	107056957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_176632_6	chr8	-	3677	5	NIC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	21	-3	intron_retention	FALSE	canonical	3	22	junction_4	289.113299590316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTATAGCAACAGTG	NA	False	NA	-16	True	AATAAA	-17	NA	70975719	70966048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70973137
Isoform_176633_393	chr8	-	1132	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	82	2	6	-2	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTTATAGCAACAGTGG	NA	False	NA	-15	True	AATAAA	-18	NA	70975748	70966047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
Isoform_176634_27	chr8	-	1209	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	6	1	6	-1	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTATAGCAACAGTGGC	NA	False	NA	-14	True	AATAAA	-19	NA	70975824	70966046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
Isoform_176637_27	chr8	-	1422	5	NIC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	-15	-3	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	284.550852221532	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTATAGCAACAGTG	NA	False	NA	-16	True	AATAAA	-17	NA	70980621	70966048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70980294
Isoform_17664_19	chr11	-	3137	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	22	-1	-7	1	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGAAAATGTCTCTCT	1123	False	NA	NA	False	TATAAA	-13	NA	107080185	107057487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_176644_62	chr8	-	1589	17	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	351.765524710708	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060962	71050139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_176645_23	chr8	-	1675	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	86	junction_1	344.430828404711	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_176647_509	chr8	-	1460	17	FSM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	15	0	3	0	multi-exon	TRUE	canonical	3	428	junction_1	289.200298236361	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060949	71050139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_176654_224	chr8	-	1559	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	428	junction_1	272.959695844562	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_17666_31	chr11	-	3570	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	118	-530	89	530	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGAAAAGCCAAGCG	1219	False	NA	NA	False	NA	NA	NA	107080089	107056958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_176661_517	chr8	-	1718	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	751	junction_3	214.93682792858	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060963	71050139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_176670_354	chr8	-	1802	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	981	junction_3	172.790615887482	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060963	71050139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_176671_39	chr8	-	1831	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-28	0	intron_retention	FALSE	canonical	3	981	junction_3	172.790615887482	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060992	71050139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_176678_25	chr8	-	1888	14	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	981	junction_2	167.345795837886	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_176682_23	chr8	-	2074	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	-529	0	-168	0	multi-exon	FALSE	canonical	3	308	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	486	False	NA	-6	True	AATAAA	-18	NA	71085274	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71082825_71083982
Isoform_176683_163	chr8	-	1084	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	461	0	461	0	multi-exon	FALSE	canonical	3	308	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	1476	False	NA	-6	True	AATAAA	-18	NA	71084284	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71082825_71083982
Isoform_176689_32	chr8	-	1305	3	FSM	ENSMUSG00000038508.8	ENSMUST00000110103.2	1380	3	76	-1	76	0	multi-exon	FALSE	canonical	3	72	junction_2	118	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	730	False	NA	-6	True	AATAAA	-18	NA	71085030	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71082825_71083982_71084275_71084799
Isoform_176692_10	chr8	-	1412	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-161	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	121.491654948899	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	493	False	NA	-6	True	AATAAA	-18	NA	71085267	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71082825_71083982_71084275_71084799_71085030_71085159
Isoform_176694_8	chr8	-	1364	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_3	127.146459731375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	455	False	NA	-6	True	AATAAA	-18	NA	71085305	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71082825_71083982_71084275_71084799_71085030_71085245
Isoform_176695_10	chr8	-	1418	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	128.073763468124	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	505	False	NA	-6	True	AATAAA	-18	NA	71085255	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71082825_71083982_71084275_71084799_71085030_71085141
Isoform_176696_14	chr8	-	1944	3	NNC	ENSMUSG00000038508.8	novel	1545	2	NA	NA	-168	0	intron_retention	FALSE	canonical	3	33	junction_2	137.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	486	False	NA	-6	True	AATAAA	-18	NA	71085274	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71082825_71083982_71085030_71085159
Isoform_176699_16	chr8	-	1499	3	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-151	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	115.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	503	False	NA	-6	True	AATAAA	-18	NA	71085257	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71082825_71083982_71084242_71084799
Isoform_176701_28	chr8	-	1369	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-151	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	120.610484158256	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	503	False	NA	-6	True	AATAAA	-18	NA	71085257	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71085159
Isoform_176702_5	chr8	-	1431	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-6418	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	125.762562880303	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	71091524	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71091364
Isoform_176703_8	chr8	-	1322	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-192	-1	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_3	126.388290596875	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCGTCTCAGTGACCT	462	False	NA	-8	True	AATAAA	-16	NA	71085298	71082044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71085245
Isoform_176704_5	chr8	-	1397	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-161	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	127.334205930692	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	493	False	NA	-6	True	AATAAA	-18	NA	71085267	71082042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71085141
Isoform_176705_28	chr8	-	4873	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	10	0	10	0	multi-exon	TRUE	canonical	3	150	junction_1	24.3554408705735	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	False	NA	-5	True	AATAAA	-18	NA	71112378	71099084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
Isoform_176709_7	chr8	-	1564	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	-124	3443	-124	300	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTATTTGTTGTTTGT	NA	False	NA	-9	True	NA	NA	NA	71112512	71102527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
Isoform_176710_53	chr8	-	1403	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	31	3449	31	294	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTAGAGGGTATTTGTT	NA	False	NA	-15	True	NA	NA	NA	71112357	71102533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
Isoform_176718_4	chr8	-	1396	5	NIC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	2	299	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	81.2603839518372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGTATTTGTTGTTTG	NA	False	NA	-10	True	NA	NA	NA	71113036	71102528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112950
Isoform_176719_7	chr8	-	1623	5	NNC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	-10	298	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	80.0199193951106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAGGGTATTTGTTGTTT	NA	False	NA	-11	True	NA	NA	NA	71113048	71102529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112734
Isoform_176720_3	chr8	-	5066	5	NNC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	80.0199193951106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGCATCCAGTGTCACC	NA	False	NA	-6	True	AATAAA	-17	NA	71113047	71099085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112734
Isoform_176721_3	chr8	-	2426	5	NNC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	-9	1102	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	80.0199193951106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGAGTGGTTGGCTCTC	NA	False	NA	-6	True	NA	NA	NA	71113047	71101725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112734
Isoform_176725_16	chr8	-	985	5	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_4	275.415141195977	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGCGTGTGGGTGGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	71213602	71211295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213181_71213365
Isoform_176726_1017	chr8	-	968	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	11	1	11	-1	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGCGTGTGGGTGGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	71213581	71211295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
Isoform_176728_13	chr8	-	1066	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	-87	1	-87	-1	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGCGTGTGGGTGGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	71213679	71211295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
Isoform_176736_81	chr8	-	1009	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_3	276.99311814556	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGCGTGTGGGTGGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	71213581	71211295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71211671_71211754_71211884_71212036_71212155_71213013_71213185_71213365
Isoform_176743_99	chr8	-	981	7	FSM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	0	-1	0	1	multi-exon	FALSE	canonical	3	181	junction_6	19.0065778087482	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTCCTAGAGTTGG	NA	False	NA	-14	True	AATAAA	-19	NA	71219307	71215417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
Isoform_176744_11	chr8	-	1010	3	FSM	ENSMUSG00000031834.16	ENSMUST00000146707.2	746	3	196	-460	-80	-4	multi-exon	FALSE	canonical	3	190	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGAGTGTCTTTGGGGA	NA	False	NA	-12	True	NA	NA	NA	71222112	71220823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71221542_71221705_71221877_71221991
Isoform_176748_12	chr8	-	3239	17	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-15	-3	combination_of_known_junctions	TRUE	canonical	2	4	junction_15	55.5444290073271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229338	71220822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71225464_71225561_71227299_71227997_71229250
Isoform_176752_731	chr8	-	3159	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	3	3	3	-3	multi-exon	FALSE	canonical	3	127	junction_15	21.8259784049498	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229354	71220822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
Isoform_176753_15	chr8	-	3183	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	-21	3	-21	-3	multi-exon	FALSE	canonical	3	127	junction_15	21.8259784049498	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229378	71220822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
Isoform_176759_3	chr8	-	5296	27	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	13.4180065363035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	0	True	AATAAA	-20	NA	71257646	71230760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71232582_71232838_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
Isoform_176761_7	chr8	-	4474	19	ISM	ENSMUSG00000031833.11	ENSMUST00000211948.2	4251	26	4435	-1087	2776	0	3prime_fragment	FALSE	canonical	3	41	junction_1	7.88203927989937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	0	True	AATAAA	-20	NA	71240646	71230760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511
Isoform_176762_11	chr8	-	5191	29	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.2919787450319	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71257633	71230763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71231688_71231719_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242565_71242640_71242730_71252101_71252134_71257586
Isoform_176764_6	chr8	-	5199	28	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-33	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.102892752759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	0	True	AATAAA	-20	NA	71257662	71230760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71231688_71231719_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242562_71242640_71242730_71252101_71252134_71257586
Isoform_176765_10	chr8	-	5347	26	FSM	ENSMUSG00000031833.11	ENSMUST00000211948.2	4251	26	-12	-1084	-12	-3	multi-exon	FALSE	canonical	3	14	junction_25	10.6046027742674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71245093	71230763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244869
Isoform_176766_3	chr8	-	5352	27	FSM	ENSMUSG00000031833.11	ENSMUST00000166004.3	5305	27	-45	-2	-45	2	multi-exon	TRUE	canonical	1	1	junction_26	15.3892300771307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGCATTTGTGAG	NA	False	NA	2	True	AATAAA	-22	NA	71249677	71230758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71249356_71249447_71249543
Isoform_176767_18	chr8	-	5186	28	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.8740167288368	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71257647	71230761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71231688_71231719_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
Isoform_176768_17	chr8	-	1915	7	ISM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	522	0	320	0	intron_retention	FALSE	canonical	0	0	junction_5	38.4476556141232	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCGTCTTTTCATTTG	NA	False	NA	-1	True	AATAAA	-20	NA	71291842	71287772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337_71291486_71291622
Isoform_176769_8	chr8	-	2250	7	ISM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	187	0	-15	0	intron_retention	FALSE	canonical	0	0	junction_5	38.4476556141232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCGTCTTTTCATTTG	NA	False	NA	-1	True	AATAAA	-20	NA	71292177	71287772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337_71291486_71291622
Isoform_176770_88	chr8	-	2167	8	FSM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	187	1	-15	-1	multi-exon	FALSE	canonical	0	0	junction_5	35.6330504688314	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCGTCTTTTCATTT	NA	False	NA	-2	True	AATAAA	-19	NA	71292177	71287773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337_71291486_71291622_71291690_71291771
Isoform_176772_3	chr8	-	2292	8	NNC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_5	30.6147890099287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGGCCGTCTTTTCAT	NA	False	NA	-4	True	AATAAA	-17	NA	71292178	71287775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291211_71291486_71291622_71291690_71291771
Isoform_176773_5	chr8	-	2243	7	NIC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_4	37.4640568486056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGGCCGTCTTTTCATT	NA	False	NA	-3	True	AATAAA	-18	NA	71292177	71287774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290191_71291337_71291486_71291622_71291690_71291771
Isoform_176775_11	chr8	-	2898	9	NIC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	20	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	8.14612638006556	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGATTCTGGTGAAAC	NA	False	NA	-7	True	AATAAA	-15	NA	71309632	71295807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71297206_71299138_71299209_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
Isoform_176776_3	chr8	-	3354	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-95	-8	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	5.77350269189626	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGGATTCTGGTGAA	NA	False	NA	-9	True	AATAAA	-13	NA	71315997	71295809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71297206_71299138_71299209_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
Isoform_176777_5	chr8	-	1956	9	NIC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	29	-166	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	9.57862203033401	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTTGACATGCAGG	NA	False	NA	NA	False	AGTAAA	-18	NA	71309623	71296715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
Isoform_176778_5	chr8	-	2870	9	NIC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	21	-8	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	9.57862203033401	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGGATTCTGGTGAA	NA	False	NA	-9	True	AATAAA	-13	NA	71309631	71295809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
Isoform_176779_3	chr8	-	2996	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-13	-8	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	7.6610285226392	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGGATTCTGGTGAA	NA	False	NA	-9	True	AATAAA	-13	NA	71315664	71295809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
Isoform_176783_520	chr8	-	910	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	446	0	-106	0	multi-exon	FALSE	canonical	3	353	junction_4	97.9030132324843	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGTCTGTATGTGTG	NA	False	NA	-5	True	AATAAA	-18	NA	71326133	71320870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
Isoform_176786_7	chr8	-	1517	4	ISM	ENSMUSG00000000792.3	ENSMUST00000000809.3	2928	15	4871	-3	4871	3	3prime_fragment	FALSE	canonical	0	0	junction_2	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCTGTGGCGTAATCA	NA	False	NA	NA	False	NA	NA	NA	71340530	71335529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_71336613_71337564_71337681_71338673_71338799_71340337
Isoform_176797_10848	chr8	-	603	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	0	657	0	0	multi-exon	FALSE	canonical	3	16397	junction_4	7934.97659101777	10848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
Isoform_176798_213	chr8	-	639	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	-36	657	-36	0	multi-exon	FALSE	canonical	3	16397	junction_4	7934.97659101777	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350092	71348022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
Isoform_176804_159	chr8	-	809	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212019.2	795	4	-14	0	0	0	multi-exon	FALSE	canonical	3	16397	junction_3	7846.8208565989	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71348152_71348243_71348690_71348776_71348957_71350002
Isoform_176808_18	chr8	-	1581	11	FSM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	-128	-1	-26	1	multi-exon	FALSE	canonical	3	71	junction_7	129.467524885587	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	568	False	NA	-8	True	NA	NA	NA	71725148	71703767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709196_71709999_71710070_71715695_71715749_71721869_71721929_71724927
Isoform_176814_13	chr8	-	2112	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	430	-529	-26	529	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTCTTGGTCATGAA	568	False	NA	-2	True	NA	NA	NA	71725148	71703239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
Isoform_176815_260	chr8	-	1583	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	430	0	-26	0	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	568	False	NA	-9	True	NA	NA	NA	71725148	71703768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
Isoform_176821_9	chr8	-	1522	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-26	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	153.13787864713	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACAGTGTGATGCGTT	568	False	NA	-11	True	NA	NA	NA	71725148	71703770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71724927
Isoform_176828_503	chr8	-	2227	4	FSM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	0	-9	0	5	multi-exon	FALSE	canonical	3	125	junction_2	9.56846672960488	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCTTTCTTCTGCAG	NA	False	NA	1	True	AATAAA	-21	NA	71834604	71826761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71827399_71828392_71828918_71831032_71831128_71833634
Isoform_176837_35	chr8	-	3212	3	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	9	5	intron_retention	FALSE	canonical	3	125	junction_1	11	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCTTTCTTCTGCAG	NA	False	NA	1	True	AATAAA	-21	NA	71834595	71826761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71828918_71831032_71831128_71833634
Isoform_176838_4	chr8	-	1536	8	NNC	ENSMUSG00000034911.9	novel	2438	13	NA	NA	-926	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.14934395500694	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACTTACAAACCTGTCC	NA	False	NA	NA	False	NA	NA	NA	71843856	71838025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71838438_71838559_71838683_71838830_71838917_71839993_71840222_71841399_71841650_71842664_71842830_71843284_71843426_71843725
Isoform_176839_148	chr8	-	1967	5	FSM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	9	2	9	-2	multi-exon	FALSE	canonical	3	51	junction_3	6.41774882649672	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCCTCCAATTTGTGA	NA	False	NA	-8	True	NA	NA	NA	71916290	71909350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889_71914617_71916109
Isoform_176840_3	chr8	-	1206	4	NIC	ENSMUSG00000007950.10	novel	1978	5	NA	NA	1	-11	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	26.7124606795322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATCCAAACTGGCCTCC	NA	False	NA	-17	True	NA	NA	NA	71916265	71909359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71910022_71910681_71910899_71911021_71911193_71916109
Isoform_176841_4	chr8	-	2629	4	NIC	ENSMUSG00000007950.10	novel	1978	5	NA	NA	7	-2	intron_retention	FALSE	canonical	3	51	junction_2	6.84754619472471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCCTCCAATTTGTGA	NA	False	NA	-8	True	NA	NA	NA	71916292	71909350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71910899_71911021_71911193_71913889_71914617_71916109
Isoform_176842_14	chr8	-	3739	17	FSM	ENSMUSG00000034863.10	ENSMUST00000093450.6	3653	17	-83	-3	-83	3	multi-exon	FALSE	canonical	3	18	junction_5	6.28987281270456	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAGGTCAGAGCAGTGAA	NA	False	NA	-18	True	AATAAA	-19	NA	71938690	71928659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
Isoform_176843_44	chr8	-	3712	17	FSM	ENSMUSG00000034863.10	ENSMUST00000093450.6	3653	17	-59	0	-59	0	multi-exon	FALSE	canonical	3	18	junction_5	6.28987281270456	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCGAGGTCAGAGCAGT	NA	False	NA	-21	True	AATAAA	-16	NA	71938666	71928662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
Isoform_176844_8	chr8	-	874	4	ISM	ENSMUSG00000034845.7	ENSMUST00000048452.6	1987	6	4058	1	4058	-1	3prime_fragment	FALSE	canonical	3	9	junction_3	3.77123616632825	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTTTGTATTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	71960338	71950409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_71951050_71959480_71959563_71959663_71959722_71960244
Isoform_176846_130	chr8	-	786	5	FSM	ENSMUSG00000046718.9	ENSMUST00000051672.9	792	5	-2	8	-2	-8	multi-exon	FALSE	canonical	3	305	junction_3	21.2176223927187	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAAGAGCTTGCTTCT	NA	False	NA	NA	False	AATAAA	-9	NA	71990102	71986906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_71987125_71987315_71987437_71988429_71988470_71989002_71989079_71989771
Isoform_176848_5	chr8	-	1335	4	NIC	ENSMUSG00000046718.9	novel	792	5	NA	NA	-18	-8	intron_retention	FALSE	canonical	3	313	junction_2	21.4527905462721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAAGAGCTTGCTTCT	NA	False	NA	NA	False	AATAAA	-9	NA	71990118	71986906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71987125_71987315_71987437_71988429_71989079_71989771
Isoform_176849_3	chr8	-	1713	4	FSM	ENSMUSG00000043664.8	ENSMUST00000052072.8	1604	4	-107	-2	-107	2	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTGTGGTTTCATTG	NA	False	NA	NA	False	AATAAA	-14	NA	72011622	72006879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_72007787_72008401_72008633_72010463_72010550_72011133
Isoform_17685_31	chr11	-	2798	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-19	-3542	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGCTTCCCCTTTTTGT	NA	False	NA	-2	True	AATAAA	-20	NA	107361544	107102259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
Isoform_176850_4	chr8	-	5606	39	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	-1	119	combination_of_known_splicesites	TRUE	canonical	0	0	junction_27	16.5171991280608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGTCCTTGCCCTTCC	NA	False	NA	NA	False	NA	NA	NA	72124381	72081578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72107447_72107668_72107776_72107849_72108306_72108386_72108898_72108946_72110646_72110756_72110899_72111446_72113085_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
Isoform_176851_6	chr8	-	941	8	FSM	ENSMUSG00000034799.17	ENSMUST00000176777.8	944	8	0	3	0	2	multi-exon	FALSE	canonical	2	5	junction_3	16.3682120998886	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGTTATATATAACAAG	NA	False	NA	0	True	NA	NA	NA	72124385	72112987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_72113294_72114462_72114496_72115124_72115180_72115483_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
Isoform_176852_33	chr8	-	925	8	NIC	ENSMUSG00000034799.17	novel	944	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	3.4166459266004	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTGTGTTATATATAACAA	NA	False	NA	-1	True	NA	NA	NA	72124385	72112988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
Isoform_176853_3	chr8	-	1873	6	NIC	ENSMUSG00000034799.17	novel	944	8	NA	NA	1	2	intron_retention	FALSE	canonical	3	45	junction_4	3.86781592116274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGTTATATATAACAAG	NA	False	NA	0	True	NA	NA	NA	72124384	72112987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_72113294_72114462_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
Isoform_176866_45	chr8	-	2646	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-45	454	-45	-454	multi-exon	FALSE	canonical	3	105	junction_2	27	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	8476	False	NA	-3	True	NA	NA	NA	72154478	72143853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_72145800_72145960_72146544_72154361
Isoform_176867_22	chr8	-	3384	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-13	-316	-13	316	multi-exon	FALSE	canonical	3	105	junction_2	27	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATTGTTGCAATGAC	8508	False	NA	1	True	AATAAA	-20	NA	72154446	72143083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_72145800_72145960_72146544_72154361
Isoform_176868_271	chr8	-	2614	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-13	454	-13	-454	multi-exon	FALSE	canonical	3	105	junction_2	27	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	8508	False	NA	-3	True	NA	NA	NA	72154446	72143853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_72145800_72145960_72146544_72154361
Isoform_176871_15	chr8	-	2761	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-162	456	-162	-456	multi-exon	FALSE	canonical	3	105	junction_2	27	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCGGTAATATTTCTGT	8359	False	NA	-5	True	NA	NA	NA	72154595	72143855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_72145800_72145960_72146544_72154361
Isoform_176878_38	chr8	-	2647	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1743	-455	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	71.5	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGGTAATATTTCTGTT	6778	False	NA	-4	True	NA	NA	NA	72156176	72143854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_72145800_72145960_72146544_72156057
Isoform_176882_22	chr8	-	2624	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1743	-454	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	75.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	6778	False	NA	-3	True	NA	NA	NA	72156176	72143853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_72145800_72145960_72146544_72156081
Isoform_176884_11	chr8	-	2599	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	46	-454	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	77	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	8567	False	NA	-3	True	NA	NA	NA	72154387	72143853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_72145800_72145960_72146544_72154317
Isoform_176888_7	chr8	-	2921	28	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	7	7	combination_of_known_junctions	FALSE	non_canonical	2	21	junction_17	33.2694861782146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGGAATCCTCTTTCC	NA	False	NA	-8	True	AATAAA	-17	NA	72178341	72161289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
Isoform_176897_5	chr8	-	3158	28	FSM	ENSMUSG00000070000.14	ENSMUST00000146100.8	3188	28	33	-3	-17	3	multi-exon	TRUE	non_canonical	0	0	junction_17	36.1995308763152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGCTGTGATTTTTGCC	NA	False	NA	-3	True	NA	NA	NA	72178327	72161034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
Isoform_1769_7	chr10	-	4756	22	FSM	ENSMUSG00000039089.16	ENSMUST00000040219.13	4572	22	-183	-1	-183	1	multi-exon	TRUE	canonical	2	5	junction_21	7.32838422979453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTTTTATATATGTAT	NA	False	NA	-10	True	AATAAA	-13	NA	26250135	26150367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26249696
Isoform_176909_5	chr8	-	1970	2	ISM	ENSMUSG00000074240.6	ENSMUST00000211946.2	2014	4	5399	2	5381	-2	3prime_fragment	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGATCTCTGCCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72961282	72958180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_72958275_72959406
Isoform_176911_169	chr8	-	3120	24	FSM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	10	-1	1	1	multi-exon	FALSE	canonical	3	88	junction_2	82.9540606689901	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175294	73094841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176912_26	chr8	-	3109	24	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	102.490148911095	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175285	73094841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135332_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176913_23	chr8	-	3050	24	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	97.7241014284603	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175317	73094841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176916_19	chr8	-	2994	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	86.0488161471765	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175301	73094841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176918_83	chr8	-	2913	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	80.7011756547953	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175294	73094842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176919_12	chr8	-	2919	23	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	102.398064612392	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175301	73094841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135332_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176922_189	chr8	-	2781	22	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	69.7814859566126	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175294	73094841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176923_46	chr8	-	2780	22	NNC	ENSMUSG00000006276.11	novel	2686	22	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	96.4251028182741	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175295	73094841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135332_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176924_13	chr8	-	2694	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212121.2	2686	22	-5	-3	-1	1	multi-exon	FALSE	canonical	3	40	junction_6	89.8414577371977	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175300	73094841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176927_9	chr8	-	2640	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212950.2	2620	22	-31	11	-9	-11	multi-exon	FALSE	canonical	3	153	junction_1	58.0603720511769	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTCCCTCAATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	73175313	73111922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176929_115	chr8	-	3371	16	FSM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	5	0	1	0	multi-exon	FALSE	canonical	3	313	junction_2	26.4222128772995	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTTCAGTGTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	73175294	73131261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_176931_28	chr8	-	1657	9	FSM	ENSMUSG00000019732.15	ENSMUST00000019876.12	1769	9	118	-6	118	6	multi-exon	FALSE	canonical	3	18	junction_4	4.64858849544676	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTGTTTTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	73197596	73178013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73178600_73179610_73179704_73181005_73181138_73181913_73182010_73185216_73185406_73188633_73188729_73192275_73192480_73197238_73197341_73197436
Isoform_176949_12	chr8	-	3670	17	ISM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	389	-141	-1	0	3prime_fragment	FALSE	canonical	3	416	junction_13	61.9333058620319	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228681	73214332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455
Isoform_176953_790	chr8	-	3695	18	FSM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	92	-141	1	0	multi-exon	FALSE	canonical	3	416	junction_13	64.9317448394025	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228978	73214332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
Isoform_176956_31	chr8	-	3769	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	416	junction_13	66.9152624126215	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228978	73214332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455_73228630_73228901
Isoform_176959_51	chr8	-	3574	18	FSM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	-15	154	1	-13	multi-exon	TRUE	canonical	3	101	junction_13	118.126552277382	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTCAGTATCATATAAG	NA	False	NA	-15	True	AATAAA	-18	NA	73228978	73214486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
Isoform_176962_13	chr8	-	3464	16	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	148.970541457774	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228978	73214332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
Isoform_176969_225	chr8	-	4404	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	-20	-1	-20	1	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGTTTGGTTCTGGTT	NA	False	NA	-5	True	AATAAA	-16	NA	73246478	73234483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
Isoform_176973_5	chr8	-	3404	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	-61	1040	-61	-1040	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGTATTAATGCATT	NA	False	NA	-113	True	AATGAA	-34	NA	73246519	73235524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
Isoform_17698_3	chr11	-	2709	8	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-49	-3542	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.7177232318526	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGCTTCCCCTTTTTGT	NA	False	NA	-2	True	AATAAA	-20	NA	107361574	107102259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_107103485_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
Isoform_176980_516	chr8	-	2975	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	23	-1	23	1	multi-exon	FALSE	canonical	3	122	junction_2	2.5	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTTGGAATCATTT	3640	False	NA	-4	True	AATAAA	-16	NA	73302091	73248403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73250951_73251366_73251442_73301738
Isoform_176983_41	chr8	-	3050	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	-52	-1	-52	1	multi-exon	FALSE	canonical	3	122	junction_2	2.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTTGGAATCATTT	3565	False	NA	-4	True	AATAAA	-16	NA	73302166	73248403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73250951_73251366_73251442_73301738
Isoform_176989_298	chr8	-	2168	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	29	695	3	-695	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTTATTATTATTTA	NA	False	NA	0	True	NA	NA	NA	73324903	73319726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
Isoform_17699_5	chr11	-	1974	2	ISM	ENSMUSG00000040430.19	ENSMUST00000103064.10	6329	10	-21	128525	-21	-15788	5prime_fragment	FALSE	canonical	3	60	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	107361546	107227242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_107228387_107360716
Isoform_176991_48	chr8	-	2857	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	29	6	3	-6	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACATTCAGTCTATCTAC	NA	False	NA	-5	True	AATAAA	-21	NA	73324903	73319037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
Isoform_1770_7	chr10	-	4423	22	FSM	ENSMUSG00000039089.16	ENSMUST00000174766.2	3411	22	-30	-982	-30	1	multi-exon	FALSE	canonical	2	4	junction_21	7.47998084079664	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTTTTATATATGTAT	NA	False	NA	-10	True	AATAAA	-13	NA	26251211	26150367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251105
Isoform_177000_39	chr8	-	4645	15	FSM	ENSMUSG00000004383.19	ENSMUST00000004497.11	3669	15	-976	0	8	0	multi-exon	FALSE	canonical	2	9	junction_14	8.74000887310996	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCTTCTCCCTCCCA	NA	False	NA	-8	True	AATAAA	-17	NA	74080160	73541226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
Isoform_177002_25	chr8	-	3092	23	FSM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	-8	0	-8	0	multi-exon	FALSE	canonical	3	15	junction_7	5.93072961101822	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	78244590	77976994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
Isoform_177004_3	chr8	-	2986	22	NIC	ENSMUSG00000037148.9	novel	3084	23	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_19	7.73131571146758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGTCCGGCCTA	NA	False	NA	NA	False	AATAAA	-12	NA	78244558	77976996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78177321_78177384_78177456_78177553_78244258
Isoform_177005_3	chr8	-	2995	22	NIC	ENSMUSG00000037148.9	novel	3084	23	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	7.70575660186956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGTCCGGCCTA	NA	False	NA	NA	False	AATAAA	-12	NA	78244570	77976996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
Isoform_177006_5	chr8	-	2907	22	FSM	ENSMUSG00000037148.9	ENSMUST00000210922.2	2208	22	-146	-553	24	0	multi-exon	FALSE	canonical	0	0	junction_2	8.01868566087306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	78244558	77976994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_77977637_77983954_77984047_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
Isoform_177009_72	chr8	-	2649	10	FSM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	30	-1	30	1	multi-exon	FALSE	canonical	3	71	junction_5	10.9927024053615	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTACGTGTCTTCTT	NA	False	NA	-3	True	TTTAAA	-7	NA	78337252	78322609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
Isoform_17701_10	chr11	-	3689	6	FSM	ENSMUSG00000040373.13	ENSMUST00000039071.3	3705	6	8	8	8	-8	multi-exon	FALSE	canonical	2	4	junction_5	1.72046505340853	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCATTGTCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	107805873	107765504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_107768436_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107805725
Isoform_177011_16	chr8	-	2710	10	FSM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	-32	0	13	0	multi-exon	FALSE	canonical	3	71	junction_5	10.9927024053615	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337314	78322610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
Isoform_177012_9	chr8	-	2405	11	NIC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	23.2381152419898	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337351	78322610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731_78336949_78337290
Isoform_177013_7	chr8	-	2472	11	NIC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	23.2381152419898	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337418	78322610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731_78336949_78337290
Isoform_177014_6	chr8	-	3983	9	NIC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	31	0	intron_retention	FALSE	canonical	3	71	junction_5	11.596739843594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337251	78322610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78332830_78332915_78333047_78336731
Isoform_177016_3	chr8	-	3633	8	FSM	ENSMUSG00000031616.8	ENSMUST00000034029.8	3625	8	-10	2	-10	-2	multi-exon	FALSE	canonical	0	0	junction_5	1.1780301787479	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAATTTTCTGTGGTTGTC	NA	False	NA	NA	False	TATAAA	-29	NA	78451075	78389661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_78391746_78393951_78394061_78394427_78394562_78398145_78398299_78401541_78401741_78415697_78415826_78446656_78447132_78450724
Isoform_177017_4	chr8	-	3272	2	FSM	ENSMUSG00000031688.5	ENSMUST00000034115.5	3204	2	-66	-2	-66	2	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTTTTAATCATTTAT	NA	False	NA	NA	False	ATTAAA	-37	NA	79163340	79159636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79162308_79162739
Isoform_177018_467	chr8	-	1611	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	18	-7	18	-1	multi-exon	FALSE	canonical	3	608	junction_1	0	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTCTTGATTTCTC	NA	False	NA	NA	False	AGTAAA	-17	NA	79235490	79231898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79233447_79235427
Isoform_177019_314	chr8	-	1649	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	-20	-7	-1	-1	multi-exon	FALSE	canonical	3	608	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTCTTGATTTCTC	NA	False	NA	NA	False	AGTAAA	-17	NA	79235528	79231898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79233447_79235427
Isoform_177028_15	chr8	-	2505	2	NNC	ENSMUSG00000037070.11	novel	1622	2	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTCTTGATTTCTC	NA	False	NA	NA	False	AGTAAA	-17	NA	79235488	79231898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_79233447_79234531
Isoform_177029_341	chr8	-	1678	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	16	1	-3	-1	multi-exon	FALSE	canonical	3	249	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTCTTGATTTCTC	NA	False	NA	NA	False	AGTAAA	-17	NA	79235511	79231898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79233493_79235427
Isoform_177034_89	chr8	-	2049	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	40	1703	40	-117	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTAGTCTCCTCGTGGT	NA	False	NA	-7	True	NA	NA	NA	79547729	79533196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
Isoform_177035_141	chr8	-	583	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	40	3169	40	3	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGTCTTTATC	NA	False	NA	-4	True	NA	NA	NA	79547729	79534662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
Isoform_177038_38	chr8	-	2072	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	18	1702	18	-116	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTAGTCTCCTCGTGGTC	NA	False	NA	-6	True	NA	NA	NA	79547751	79533195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
Isoform_17704_12	chr11	-	3548	17	FSM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	4	4857	4	-67	multi-exon	FALSE	canonical	2	9	junction_8	3.24458683810435	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTGATATAATTGTAT	6288	False	NA	NA	False	AATAAA	-22	NA	108234750	107829069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107872436_107872529_107874710_107874885_107877073_107877212_107903452_107903550_107903770_107903906_107905050_107905208_107944800_107944930_107948587_107948700_108082955_108083039_108231471_108231504_108234320
Isoform_177041_65	chr8	-	1972	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	18	117	18	-117	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTAGTCTCCTCGTGGT	NA	False	NA	-7	True	NA	NA	NA	79547751	79533196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
Isoform_177042_121	chr8	-	507	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	17	1583	17	3	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGTCTTTATC	NA	False	NA	-4	True	NA	NA	NA	79547752	79534662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
Isoform_177049_21	chr8	-	1335	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	6	4309	6	1	multi-exon	FALSE	canonical	3	29	junction_6	17.5214154679352	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGAGTTTCCCTGAG	NA	False	NA	-5	True	AATAAA	-18	NA	80021560	79994535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
Isoform_177050_16	chr8	-	1359	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	-18	4309	-18	1	multi-exon	FALSE	canonical	3	29	junction_6	17.5214154679352	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGAGTTTCCCTGAG	NA	False	NA	-5	True	AATAAA	-18	NA	80021584	79994535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
Isoform_177051_5	chr8	-	759	5	NIC	ENSMUSG00000037022.4	novel	5650	7	NA	NA	-18	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	28.7782469931718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGAGTTTCCCTGAGT	NA	False	NA	-4	True	AATAAA	-19	NA	80021584	79994534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80021542
Isoform_177055_231	chr8	-	3002	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	92	5	92	-5	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCATTTTTTTT	NA	False	NA	10	True	AATAAA	-28	NA	80126055	80065028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
Isoform_177056_110	chr8	-	3090	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	4	5	4	-5	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCATTTTTTTT	NA	False	NA	10	True	AATAAA	-28	NA	80126143	80065028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
Isoform_177087_2455	chr8	-	3513	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	96	184	6	-184	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	2455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGCTTACCGGTGTGT	NA	False	NA	-11	True	AATAAA	-17	NA	80438273	80410274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
Isoform_177088_621	chr8	-	3558	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	55	180	-15	-180	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTACCGGTGTGTGGTC	NA	False	NA	-7	True	AATAAA	-21	NA	80438314	80410270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
Isoform_17709_34	chr11	-	2193	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	148	13	53	-13	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	3022	False	NA	NA	False	NA	NA	NA	109363972	109343564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
Isoform_177093_56	chr8	-	3719	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	96	-22	6	22	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGTTTCTTTATAGATT	NA	False	NA	NA	False	ATTAAA	-20	NA	80438273	80410068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
Isoform_17710_20	chr11	-	2277	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	64	13	-31	-13	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	2938	False	NA	NA	False	NA	NA	NA	109364056	109343564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
Isoform_177107_6	chr8	-	2624	14	NIC	ENSMUSG00000064325.5	novel	9074	13	NA	NA	483	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	3.68910117177901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTGCCCTTTTAAA	4789	False	NA	0	True	ATTAAA	-19	NA	80784152	80692479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_80693058_80699026_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
Isoform_177108_3	chr8	-	2594	13	FSM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	458	6022	458	-6022	multi-exon	FALSE	canonical	1	1	junction_5	3.65433532488012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTTCCAAACTCCTT	4764	False	NA	NA	False	ATTAAA	-16	NA	80784177	80698503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
Isoform_177109_3	chr8	-	8598	13	FSM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	475	1	475	-1	multi-exon	FALSE	canonical	1	1	junction_5	3.65433532488012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTCTTGTGCCCTTTT	4781	False	NA	-3	True	ATTAAA	-16	NA	80784160	80692482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
Isoform_17712_7	chr11	-	2104	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	311	-61	216	61	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAGGTGAATTATTTTT	3185	False	NA	NA	False	ATTAAA	-20	NA	109363809	109343490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
Isoform_17713_3	chr11	-	3911	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	311	-1868	216	-3	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTCTGATGTTCTTCT	3185	False	NA	-4	True	AATAAA	-18	NA	109363809	109341683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
Isoform_17714_5	chr11	-	2407	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070152.12	4219	6	-72	1884	-72	-13	multi-exon	FALSE	canonical	0	0	junction_5	13.6440463206484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	2498	False	NA	NA	False	NA	NA	NA	109364496	109343564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109364073
Isoform_17715_141	chr11	-	2126	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1379	-13	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	1191	False	NA	NA	False	NA	NA	NA	109365803	109343564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
Isoform_177151_337	chr8	-	4694	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	-21	1440	-21	-1440	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTGGTCTTTTCTTTCC	NA	False	NA	-5	True	AATAAA	-37	NA	81466147	81426575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_177152_503	chr8	-	3800	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	-20	2333	-20	-2333	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTTCATTTGATTT	NA	False	NA	-22	True	AATAAA	-18	NA	81466146	81427468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_177153_854	chr8	-	3575	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	204	2334	132	-2334	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCATTTGATT	NA	False	NA	-23	True	AATAAA	-17	NA	81465922	81427469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_177154_607	chr8	-	3621	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	159	2333	87	-2333	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTTCATTTGATTT	NA	False	NA	-22	True	AATAAA	-18	NA	81465967	81427468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_177155_626	chr8	-	4468	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	207	1438	135	-1438	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTTTCTTTCCAT	NA	False	NA	-3	True	AATAAA	-39	NA	81465919	81426573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_177157_422	chr8	-	4516	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	159	1438	87	-1438	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTTTCTTTCCAT	NA	False	NA	-3	True	AATAAA	-39	NA	81465967	81426573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_17718_10	chr11	-	4012	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1383	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTCTGATGTTCTTCTG	1187	False	NA	-3	True	AATAAA	-19	NA	109365807	109341682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
Isoform_177194_94	chr8	-	4049	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21254	4	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	171.228765106801	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81585871	81491062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
Isoform_1772_29	chr10	-	4401	22	NIC	ENSMUSG00000039089.16	novel	4572	22	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_21	6.02037357305871	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTTTTTATATATGTA	NA	False	NA	-11	True	AATAAA	-12	NA	26251991	26150368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251906
Isoform_177203_30	chr8	-	4901	10	FSM	ENSMUSG00000031714.10	ENSMUST00000034150.10	4870	10	-25	-6	-2	4	multi-exon	FALSE	canonical	3	25	junction_9	135.607913385759	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81607150	81491062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
Isoform_177209_1061	chr8	-	3960	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21254	5	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTACTTTTTTCT	NA	False	NA	-2	True	AATAAA	-22	NA	81585871	81491061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
Isoform_177211_27	chr8	-	4046	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21254	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	172.619350016155	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81585871	81491062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81561848_81561936_81585823
Isoform_177213_86	chr8	-	4678	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	34	-5	19	5	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTCCTGTTTTGGTTT	NA	False	NA	-4	True	ATTAAA	-19	NA	81741523	81707356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
Isoform_177214_177	chr8	-	4582	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	34	91	19	-91	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTATATTTGGATTTT	NA	False	NA	-9	True	ATTAAA	-18	NA	81741523	81707452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
Isoform_177221_4	chr8	-	3206	8	NIC	ENSMUSG00000038250.10	novel	4707	10	NA	NA	16	0	intron_retention	FALSE	canonical	1	1	junction_1	38.3927076409049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTACTGTCCTGTTTT	NA	False	NA	-9	True	ATTAAA	-14	NA	81741526	81707361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_81708610_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
Isoform_177223_555	chr8	-	1641	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	35	-1	-11	1	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGGTACTGAGTTC	NA	False	NA	-16	True	AATAAA	-18	NA	83500754	83490248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
Isoform_177225_77	chr8	-	1691	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	-15	-1	-15	1	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGGTACTGAGTTC	NA	False	NA	-16	True	AATAAA	-18	NA	83500804	83490248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
Isoform_177229_10	chr8	-	1550	8	FSM	ENSMUSG00000031711.8	ENSMUST00000211462.2	761	8	-11	-778	-11	1	multi-exon	FALSE	canonical	2	30	junction_6	164.077259054311	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGGTACTGAGTTC	NA	False	NA	-16	True	AATAAA	-18	NA	83500754	83490248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83499508_83499641_83500685
Isoform_17723_62	chr11	-	2039	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	11	0	11	0	multi-exon	FALSE	canonical	1	33	junction_5	23.2491039253846	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	109502247	109464156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
Isoform_177232_9	chr8	-	734	7	ISM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	-3	2956	-3	-2067	5prime_fragment	FALSE	canonical	3	426	junction_4	44.8094732047688	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTAGTGTGTTGTATGA	NA	False	NA	NA	False	AATAAA	-16	NA	83500792	83493205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
Isoform_177233_169	chr8	-	4300	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	14	5	14	-5	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCCTTTCTGTGGATG	8184	False	NA	-2	True	AATAAA	-18	NA	84059101	84039655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
Isoform_177235_3	chr8	-	699	6	ISM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	9	6360	9	-1617	5prime_fragment	FALSE	canonical	3	74	junction_1	6.62117814289874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAAATTCTGCAGTTG	8179	False	NA	NA	False	AATAAA	-18	NA	84059106	84046010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
Isoform_177236_19	chr8	-	1772	4	FSM	ENSMUSG00000063253.12	ENSMUST00000167525.3	1764	4	13	-21	1	0	multi-exon	FALSE	canonical	3	29	junction_2	125.913550590166	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTGTGTGTGTTT	7430	False	NA	-2	True	AATAAA	-16	NA	84169123	84161123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84162670_84164181_84164263_84164613_84164686_84169050
Isoform_177238_238	chr8	-	1788	4	FSM	ENSMUSG00000063253.12	ENSMUST00000212031.2	409	4	-1	-1378	-1	1	multi-exon	FALSE	canonical	3	281	junction_1	12.1928941054479	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTGTGTTTT	7418	False	NA	-1	True	AATAAA	-17	NA	84169135	84161122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84169050
Isoform_177251_1635	chr8	-	1157	13	FSM	ENSMUSG00000031708.18	ENSMUST00000019382.17	1158	13	1	0	1	0	multi-exon	FALSE	canonical	3	3555	junction_3	302.48290814891	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321105	84298328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
Isoform_177254_327	chr8	-	1107	12	FSM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	14	-1	-5	-1	multi-exon	FALSE	canonical	3	487	junction_9	1051.54616581631	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTGTGTTCTTTAG	NA	False	NA	-4	True	AATAAA	-14	NA	84321099	84298327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
Isoform_177268_68	chr8	-	3003	22	FSM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	-7	-1	-7	1	multi-exon	FALSE	canonical	3	45	junction_21	57.6705790816251	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84420696	84396718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84420588
Isoform_177269_1059	chr8	-	3077	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	31	3554	19	1	multi-exon	TRUE	canonical	3	231	junction_13	29.0604187256126	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84425777	84396718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
Isoform_177270_56	chr8	-	3128	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	-20	3554	-20	1	multi-exon	FALSE	canonical	3	231	junction_13	29.0604187256126	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84425828	84396718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
Isoform_177275_20	chr8	-	3179	21	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	3	1	intron_retention	FALSE	canonical	3	231	junction_12	29.7011784277998	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84425805	84396718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
Isoform_177276_43	chr8	-	2999	21	ISM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	-18	4051	-18	0	5prime_fragment	FALSE	canonical	3	231	junction_12	28.1539961639551	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTTTGTCTGCAACCT	NA	False	NA	-15	True	NA	NA	NA	84425826	84397215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
Isoform_177285_30	chr8	-	3007	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	-14	7	0	-5	multi-exon	FALSE	canonical	3	18	junction_16	54.4176930653952	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGCACGTTTGCT	NA	False	NA	-16	True	ATTAAA	-14	NA	84467812	84449997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_177288_7	chr8	-	3147	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	-12	-135	2	24	multi-exon	FALSE	canonical	3	18	junction_16	54.4176930653952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACATCGATTTGTCACCT	NA	False	NA	NA	False	AATAAA	-41	NA	84467810	84449855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_177295_260	chr8	-	2871	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-9	5	1	-5	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGCACGTTTGCT	NA	False	NA	-16	True	ATTAAA	-14	NA	84467811	84449997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_177296_79	chr8	-	2902	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-40	5	-30	-5	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGCACGTTTGCT	NA	False	NA	-16	True	ATTAAA	-14	NA	84467842	84449997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_177297_51	chr8	-	2984	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-8	-109	2	-4	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACTAAAGCTTTGGAAC	NA	False	NA	98	True	AATAAA	-13	NA	84467810	84449883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_177298_42	chr8	-	2987	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-126	6	27	-6	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATGGCACGTTTGC	NA	False	NA	-17	True	ATTAAA	-13	NA	84467928	84449998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_17730_25	chr11	-	5128	12	FSM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	11	-1801	11	0	multi-exon	FALSE	canonical	1	33	junction_4	24.2817484087354	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	109502247	109464156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
Isoform_177302_8	chr8	-	3114	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-132	-115	21	2	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGCTTTGGAACAATAAA	NA	False	NA	NA	False	AATAAA	-19	NA	84467934	84449877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_177304_7	chr8	-	2932	19	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_18	48.6081903884469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467809	84449992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84461040_84467735
Isoform_177306_8	chr8	-	2717	18	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	2	7	junction_15	47.1593778628941	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGCACGTTTGCT	NA	False	NA	-16	True	ATTAAA	-14	NA	84467810	84449997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460637_84460755_84460924_84460982_84467735
Isoform_177308_63	chr8	-	2724	18	FSM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	144	118	1	-5	multi-exon	FALSE	canonical	2	28	junction_14	43.193056599508	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGCACGTTTGCT	NA	False	NA	-16	True	ATTAAA	-14	NA	84467811	84449997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_177309_9	chr8	-	2854	18	FSM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	13	119	13	-6	multi-exon	FALSE	canonical	2	28	junction_14	43.193056599508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATGGCACGTTTGC	NA	False	NA	-17	True	ATTAAA	-13	NA	84467942	84449998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_177310_17	chr8	-	2847	18	FSM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	143	-4	0	4	multi-exon	FALSE	canonical	2	28	junction_14	43.193056599508	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTTTGGAACAATAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	84467812	84449875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_177314_5	chr8	-	2482	3	NIC	ENSMUSG00000074219.4	novel	609	4	NA	NA	-3	1	intron_retention	FALSE	canonical	0	0	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTCCTCTAGCCTTAA	6067	False	NA	NA	False	AATAAA	-16	NA	84681837	84658956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84661236_84662360_84662458_84681731
Isoform_177315_87	chr8	-	1326	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	19	6	17	-6	multi-exon	FALSE	canonical	3	145	junction_2	17	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7552	False	NA	-15	True	AATAAA	-16	NA	84738768	84736856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84737122_84737339_84737402_84737769
Isoform_177316_35	chr8	-	1348	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	-3	6	-3	-6	multi-exon	FALSE	canonical	3	145	junction_2	17	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7530	False	NA	-15	True	AATAAA	-16	NA	84738790	84736856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84737122_84737339_84737402_84737769
Isoform_177319_27	chr8	-	988	4	NIC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	68.8250600354906	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7525	False	NA	-15	True	AATAAA	-16	NA	84738795	84736856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84737122_84737339_84737402_84737769_84738378_84738742
Isoform_177320_25	chr8	-	993	4	NIC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	7	-6	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	63.754738385995	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7542	False	NA	-15	True	AATAAA	-16	NA	84738778	84736856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84737122_84737339_84737402_84737769_84738400_84738742
Isoform_177323_30	chr8	-	2622	14	FSM	ENSMUSG00000005465.10	ENSMUST00000005601.9	2664	14	43	-1	-6	1	multi-exon	FALSE	canonical	3	16	junction_12	6.10848667572056	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAGAGTGCCTTAACA	5302	False	NA	NA	False	NA	NA	NA	84769175	84756921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84757822_84757941_84758051_84758147_84758239_84758645_84758772_84760579_84760739_84760820_84760923_84762713_84762903_84762991_84763176_84765924_84765999_84766106_84766264_84767302_84767461_84767560_84767719_84768715_84768834_84769078
Isoform_177325_19	chr8	-	934	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	-31	-269	-31	269	multi-exon	FALSE	canonical	3	87	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACGCGTGCGTATCAT	2817	False	NA	-2	True	AATAAA	-17	NA	84771660	84769288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84769961_84771398
Isoform_177327_27	chr8	-	2318	13	FSM	ENSMUSG00000037103.9	ENSMUST00000041367.9	2312	13	-8	2	-2	-2	multi-exon	FALSE	canonical	3	17	junction_1	56.6688112339289	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGTCCTGTTCT	9255	False	NA	-5	True	ACTAAA	-15	NA	84831399	84823702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84824138_84824251_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
Isoform_177328_587	chr8	-	2204	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	-7	2	-2	-2	multi-exon	FALSE	canonical	3	169	junction_7	21.0218140669797	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGTCCTGTTCT	9255	False	NA	-5	True	ACTAAA	-15	NA	84831399	84823702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
Isoform_17733_4	chr11	-	1173	8	FSM	ENSMUSG00000041895.16	ENSMUST00000106689.2	1220	8	54	-7	54	7	multi-exon	FALSE	canonical	3	112	junction_2	3.73619909446343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTCACGGGGGACTCGG	NA	False	NA	NA	False	ATTAAA	-27	NA	109502204	109472890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
Isoform_177333_9	chr8	-	2292	12	NIC	ENSMUSG00000037103.9	novel	2199	13	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	169	junction_6	21.1695243293414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGTCCTGTTCT	9254	False	NA	-5	True	ACTAAA	-15	NA	84831400	84823702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
Isoform_177335_7	chr8	-	2902	11	NIC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	169	junction_6	21.5025579873651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGTCCTGTTCT	9260	False	NA	-5	True	ACTAAA	-15	NA	84831394	84823702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84829511_84829584_84829683_84831245
Isoform_177338_16	chr8	-	3427	29	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	2	8	junction_17	19.365542458033	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGCCTCAGCTTTGT	NA	False	NA	-14	True	AATGAA	-11	NA	84874537	84859469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865456_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
Isoform_17734_4	chr11	-	8241	39	FSM	ENSMUSG00000018800.15	ENSMUST00000043961.12	8231	39	-18	8	-18	-8	multi-exon	FALSE	canonical	1	7	junction_11	4.33987183389395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTATGACAGACTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	110228522	110160202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228310
Isoform_177343_300	chr8	-	3418	29	FSM	ENSMUSG00000036686.17	ENSMUST00000040383.9	3471	29	40	13	1	-4	multi-exon	FALSE	canonical	3	61	junction_17	12.7601500215095	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGCCTCAGCTTTGT	NA	False	NA	-14	True	AATGAA	-11	NA	84874525	84859469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
Isoform_177345_4	chr8	-	3283	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	13	0	combination_of_known_splicesites	TRUE	canonical	2	5	junction_3	20.7894269846098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCAGCTTTGTCTTT	NA	False	NA	-10	True	AATGAA	-15	NA	84874513	84859465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
Isoform_177346_5	chr8	-	3349	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	21.4284786724755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTCAGCTTTGTCT	NA	False	NA	-12	True	AATGAA	-13	NA	84874531	84859467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84859887_84859960_84860009_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
Isoform_177348_40	chr8	-	2538	5	ISM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	13554	273	13554	-273	3prime_fragment	FALSE	canonical	3	31	junction_1	1.22474487139159	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCAAGACTGGGTTGC	NA	False	NA	-7	True	AAAAAG	-20	NA	84950130	84937579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848
Isoform_17735_6	chr11	-	8112	39	NIC	ENSMUSG00000018800.15	novel	8231	39	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	4.51559317448456	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGACAGACTTCAGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	110228498	110160198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228419
Isoform_177352_63	chr8	-	4357	14	FSM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	0	268	0	-268	multi-exon	TRUE	canonical	3	19	junction_10	5.27694550342846	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACTGGGTTGCATTGC	6086	False	NA	-2	True	AAAAAG	-25	NA	84963684	84937574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
Isoform_177353_33	chr8	-	4399	14	FSM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	-45	271	-45	-271	multi-exon	FALSE	canonical	3	19	junction_10	5.27694550342846	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAAGACTGGGTTGCAT	6041	False	NA	-5	True	AAAAAG	-22	NA	84963729	84937577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
Isoform_177356_28	chr8	-	683	3	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	2	3	intron_retention	TRUE	canonical	3	981	junction_1	437.5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	9836	False	NA	-4	True	AATAAA	-15	NA	84976346	84972863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_84972948_84972967_84973323_84976102
Isoform_177357_761	chr8	-	597	4	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	3	981	junction_1	392.595069873386	761	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	9836	False	NA	-4	True	AATAAA	-15	NA	84976346	84972863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_84972948_84972967_84973323_84976102_84976159_84976244
Isoform_17736_4	chr11	-	5266	39	NIC	ENSMUSG00000018800.15	novel	8231	39	NA	NA	16	-2878	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	4.51559317448456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCATGTTTATATCTG	NA	False	NA	NA	False	AATAAA	-17	NA	110228526	110163072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228419
Isoform_177360_13	chr8	-	1674	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	29	1116	29	0	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTACTTTTATTT	6995	False	NA	NA	False	NA	NA	NA	84983924	84977650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
Isoform_177361_469	chr8	-	1208	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	35	1576	35	-460	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCATCTTCACCCACAC	7001	False	NA	-2	True	AATAAA	-20	NA	84983918	84978110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
Isoform_177362_10	chr8	-	2777	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	35	7	35	-7	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCGCATGTTTTACAAT	7001	False	NA	NA	False	NA	NA	NA	84983918	84976541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
Isoform_177365_7	chr8	-	1301	4	NIC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	24	-466	intron_retention	FALSE	canonical	3	199	junction_1	15.6914697279198	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAAGTTCATCTTCAC	6990	False	NA	-8	True	AATAAA	-14	NA	84983929	84978116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84978341_84980491_84980982_84982872_84983049_84983518
Isoform_177368_14	chr8	-	1370	3	NIC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	32	369	intron_retention	FALSE	canonical	3	223	junction_2	7	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAAAACCAAAAAACAA	6998	False	NA	NA	False	NA	NA	NA	84983921	84980190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84980982_84982872_84983049_84983518
Isoform_177369_9	chr8	-	1299	3	NIC	ENSMUSG00000004996.10	novel	804	4	NA	NA	-38	369	intron_retention	FALSE	canonical	3	28	junction_1	97.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAAAACCAAAAAACAA	7005	False	NA	NA	False	NA	NA	NA	84983914	84980190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84980982_84982936_84983049_84983518
Isoform_17737_20	chr11	-	1875	3	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-1	15	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGTGATAGTGGAGAAG	NA	False	NA	NA	False	TATAAA	-38	NA	113092665	112934705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_112935987_112958167_112958213_113092116
Isoform_177371_4	chr8	-	1663	10	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-21	3	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	70.0393187633882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTGTTTCTAAACTCAT	NA	False	NA	-19	True	ATTAAA	-18	NA	84997030	84984926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989595_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_177373_147	chr8	-	1601	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	13	505	0	1	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84996996	84984928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_177374_11	chr8	-	2202	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	-55	-28	-55	28	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTGTTTGCATGTT	NA	False	NA	NA	False	NA	NA	NA	84997064	84984395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_177376_11	chr8	-	2134	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	13	-28	0	28	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTGTTTGCATGTT	NA	False	NA	NA	False	NA	NA	NA	84996996	84984395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_177377_5	chr8	-	2845	9	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-41	0	intron_retention	FALSE	canonical	3	143	junction_8	31.6501875981802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCCTTGTTTCTAAAC	NA	False	NA	-23	True	ATTAAA	-14	NA	84997050	84984930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_177379_12	chr8	-	1465	9	FSM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	-23	-1	0	1	multi-exon	FALSE	canonical	3	13	junction_1	76.6823806359714	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84996999	84984928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_84985556_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_17738_8	chr11	-	1806	2	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTCTGTAAATGTTGT	NA	False	NA	NA	False	TATAAA	-13	NA	113092666	112934730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_112935987_113092116
Isoform_177380_4	chr8	-	2838	8	NIC	ENSMUSG00000004994.13	novel	1441	9	NA	NA	4	1	intron_retention	FALSE	canonical	3	143	junction_7	34.7521838984874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84997005	84984928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_177381_4	chr8	-	1512	8	ISM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	-35	1331	-2	-517	5prime_fragment	FALSE	canonical	3	143	junction_7	34.7521838984874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTCTAGGGCCCCAGA	NA	False	NA	NA	False	NA	NA	NA	84997011	84986260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_177397_116	chr8	-	4206	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85413766	85397107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
Isoform_177401_762	chr8	-	4293	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	51	0	51	0	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414480	85397107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
Isoform_177404_348	chr8	-	4317	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	27	0	27	0	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414504	85397107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
Isoform_177406_17	chr8	-	4734	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	59	-449	59	449	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTAGTTTGATTTGTGGT	NA	False	NA	0	True	AATAAA	-21	NA	85414472	85396658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
Isoform_177413_86	chr8	-	4238	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	27	2	combination_of_known_junctions	FALSE	canonical	3	138	junction_4	190.539864595312	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCTCTGCTCACT	NA	False	NA	-4	True	AATAAA	-21	NA	85414504	85397105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414303
Isoform_177417_16	chr8	-	1220	2	FSM	ENSMUSG00000053226.8	ENSMUST00000238279.2	1369	2	150	-1	150	0	multi-exon	FALSE	canonical	3	24	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCGTGCTTCTTTCTG	549	False	NA	1	True	CATAAA	-16	NA	85558888	85542032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85543163_85558798
Isoform_177424_825	chr8	-	1807	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	-10	277	-10	-18	multi-exon	TRUE	canonical	3	805	junction_3	189.238440862315	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	-32	True	AATAAA	-19	NA	85567280	85561557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
Isoform_177427_18	chr8	-	1867	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	-70	277	-46	-18	multi-exon	FALSE	canonical	3	805	junction_3	189.238440862315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	-32	True	AATAAA	-19	NA	85567340	85561557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
Isoform_177437_573	chr8	-	1808	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	11	23	11	-23	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTAATAATGGTTCATGC	NA	False	NA	-37	True	AATAAA	-14	NA	85567283	85561562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
Isoform_17745_41	chr11	-	2745	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	210.166029605167	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7772	False	NA	-3	True	AATAAA	-18	NA	113456579	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456411
Isoform_17746_211	chr11	-	2682	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	187.885736552832	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7745	False	NA	-3	True	AATAAA	-18	NA	113456606	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
Isoform_177467_3069	chr8	-	1876	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	68	240	-36	-240	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	3069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTGTCTCCTTCTCTG	NA	False	NA	-3	True	ATTAAA	-19	NA	85573495	85568718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
Isoform_177468_121	chr8	-	2030	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	-87	241	-87	-241	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573650	85568719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
Isoform_177480_7	chr8	-	2049	11	FSM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	124	-6	124	6	multi-exon	FALSE	canonical	3	233	junction_6	21.1293634546808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCTTCTCAATCTAGA	NA	False	NA	1	True	AATAAA	-15	NA	85620422	85613015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
Isoform_177482_56	chr8	-	1844	11	FSM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	135	188	135	-188	multi-exon	FALSE	canonical	3	233	junction_6	21.1293634546808	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	-7	True	AATAAA	-21	NA	85620411	85613209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
Isoform_177485_94	chr8	-	1892	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	28	194	24	-194	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGGACTGGACTAGGT	NA	False	NA	-13	True	AATAAA	-15	NA	85620522	85613215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
Isoform_177486_247	chr8	-	1787	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	139	188	135	-188	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	-7	True	AATAAA	-21	NA	85620411	85613209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
Isoform_177487_11	chr8	-	2093	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	27	-6	23	6	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCTTCTCAATCTAGA	NA	False	NA	1	True	AATAAA	-15	NA	85620523	85613015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
Isoform_177490_18	chr8	-	1982	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	138	-6	134	6	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCTTCTCAATCTAGA	NA	False	NA	1	True	AATAAA	-15	NA	85620412	85613015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
Isoform_177498_10	chr8	-	2802	9	ISM	ENSMUSG00000053693.17	ENSMUST00000109741.9	4872	26	18531	2	5292	1	3prime_fragment	FALSE	canonical	1	2	junction_8	3.38193731461717	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGGGTTCACACCT	NA	False	NA	-1	True	AATAAA	-18	NA	85645451	85638533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_85639871_85639948_85640137_85642083_85642221_85642308_85642432_85642784_85643015_85643181_85643389_85644355_85644604_85644681_85644861_85645298
Isoform_1775_19	chr10	-	2023	4	FSM	ENSMUSG00000038876.13	ENSMUST00000161508.3	945	4	-33	-1045	-12	2	multi-exon	FALSE	canonical	3	17	junction_3	93.3821301011185	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGTTTGAGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	29238055	29222169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237959
Isoform_17750_33	chr11	-	2675	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26100	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.740434823617	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	NA	False	NA	-3	True	AATAAA	-18	NA	113482705	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607
Isoform_177500_9	chr8	-	2755	7	NIC	ENSMUSG00000053693.17	novel	4872	26	NA	NA	5857	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	2.76887462097269	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGGTTCACACCTCC	NA	False	NA	1	True	AATAAA	-20	NA	85644886	85638531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_85640137_85642083_85642221_85642308_85642432_85642784_85643015_85643181_85643389_85644355_85644604_85644681
Isoform_177501_9	chr8	-	2875	8	NIC	ENSMUSG00000053693.17	novel	4872	26	NA	NA	5297	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	3.54562104171167	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGGGTTCACACCT	NA	False	NA	-1	True	AATAAA	-18	NA	85645446	85638533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_85640137_85642083_85642221_85642308_85642432_85642784_85643015_85643181_85643389_85644355_85644604_85644681_85644861_85645298
Isoform_177505_27	chr8	-	2072	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-21	-7	9	7	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATCTATTTATTTATT	8262	False	NA	0	True	NA	NA	NA	85692661	85683231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
Isoform_177506_604	chr8	-	1028	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-42	1058	11	-1	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACCGAGTGCTTTGTG	8241	False	NA	-9	True	AATAAA	-13	NA	85692682	85684296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
Isoform_177510_25	chr8	-	2121	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-74	-3	-21	3	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGTTATCTATTTATT	8209	False	NA	-4	True	NA	NA	NA	85692714	85683235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
Isoform_177511_17	chr8	-	1947	10	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	5	-1	intron_retention	FALSE	canonical	3	9	junction_9	457.889387688801	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACCGAGTGCTTTGTG	4718	False	NA	-9	True	AATAAA	-13	NA	85696205	85684296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695726
Isoform_177514_58	chr8	-	1731	10	FSM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	195	1055	36	2	multi-exon	FALSE	canonical	3	62	junction_9	446.653979919331	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCGAGTGCTTTGTGGCT	4749	False	NA	-6	True	AATAAA	-16	NA	85696174	85684293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914
Isoform_177517_25	chr8	-	1510	10	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	1	-4	intron_retention	FALSE	canonical	3	25	junction_9	454.462509828375	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGACCGAGTGCTTT	4528	False	NA	-12	True	AATAAA	-10	NA	85696395	85684299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85696350
Isoform_177521_24	chr8	-	1138	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	2	1	2	-1	multi-exon	FALSE	canonical	3	1021	junction_4	88.9793983646402	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACCGAGTGCTTTGTG	8232	False	NA	-9	True	AATAAA	-13	NA	85692691	85684296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
Isoform_177529_1992	chr8	-	1253	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	3	0	3	0	multi-exon	FALSE	canonical	1	664	junction_3	477.58303524681	1992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8403	False	NA	-4	True	AATAAA	-14	NA	85751907	85744559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
Isoform_17753_45	chr11	-	2742	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	210.308559026969	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7772	False	NA	-3	True	AATAAA	-18	NA	113456579	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
Isoform_177532_23	chr8	-	1302	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	109	junction_5	750.461950327189	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8419	False	NA	-4	True	AATAAA	-14	NA	85751891	85744559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746603_85750806_85750955_85751733
Isoform_177537_158	chr8	-	1197	9	FSM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	40	1	-3	0	multi-exon	FALSE	canonical	3	89	junction_6	13.3410784796432	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTAGTCTTCATTCT	NA	False	NA	-3	True	AATAAA	-34	NA	85807335	85801664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
Isoform_177538_20	chr8	-	1470	8	FSM	ENSMUSG00000005150.17	ENSMUST00000131909.8	1406	8	-67	3	4	0	multi-exon	FALSE	canonical	3	115	junction_4	7.90763000177031	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTCTTAGTCTTCATT	NA	False	NA	-5	True	AATAAA	-32	NA	85807328	85801666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806855_85806941_85807063_85807141
Isoform_177539_5	chr8	-	1554	7	FSM	ENSMUSG00000005150.17	ENSMUST00000136696.8	1561	7	4	3	4	0	multi-exon	FALSE	canonical	3	115	junction_3	8.39477350630869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTCTTAGTCTTCATT	NA	False	NA	-5	True	AATAAA	-32	NA	85807328	85801666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85801973_85802451_85802567_85802652_85802914_85806209_85806337_85806417_85806855_85806941_85807063_85807141
Isoform_17755_144	chr11	-	2679	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	195.470816236082	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7745	False	NA	-3	True	AATAAA	-18	NA	113456606	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
Isoform_17756_29	chr11	-	2657	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26085	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.881966828977	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	NA	False	NA	-3	True	AATAAA	-18	NA	113482690	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113482607
Isoform_177561_3250	chr8	-	3188	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	285	1	-48	-1	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	3250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGATTATCTTTGTTT	NA	False	NA	-9	True	AATAAA	-14	NA	86026146	85987021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
Isoform_177563_49	chr8	-	3455	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	18	1	18	-1	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGATTATCTTTGTTT	NA	False	NA	-9	True	AATAAA	-14	NA	86026413	85987021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
Isoform_177576_215	chr8	-	1473	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	19	95	0	-95	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTAGTGTGGTGTAG	NA	False	NA	-1	True	AATAAA	-22	NA	86159443	86135482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
Isoform_177577_25	chr8	-	1555	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	-67	99	-67	-99	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGATTAAGTAGTGTGGT	NA	False	NA	-5	True	AATAAA	-18	NA	86159529	86135486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
Isoform_177589_185	chr8	-	2909	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	4	6	4	-6	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGTTCCTCAGCATTC	NA	False	NA	NA	False	AATAAA	-9	NA	86281969	86264267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
Isoform_17759_17	chr11	-	2747	10	NIC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	159.75845965738	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7775	False	NA	-3	True	AATAAA	-18	NA	113456576	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456411
Isoform_177590_831	chr8	-	1903	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	18	998	18	-998	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTCTGTGTCACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	86281955	86265259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
Isoform_177591_72	chr8	-	1939	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	-18	998	-18	-998	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTCTGTGTCACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	86281991	86265259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
Isoform_177595_21	chr8	-	2931	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	-18	6	-18	-6	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGTTCCTCAGCATTC	NA	False	NA	NA	False	AATAAA	-9	NA	86281991	86264267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
Isoform_17760_84	chr11	-	2657	10	FSM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	6	1	6	-1	multi-exon	FALSE	canonical	3	154	junction_5	113.78341999899	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7775	False	NA	-3	True	AATAAA	-18	NA	113456576	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
Isoform_177600_3	chr8	-	1044	6	ISM	ENSMUSG00000036902.12	ENSMUST00000209479.2	4936	9	-138	25749	32	-22450	5prime_fragment	FALSE	canonical	1	1	junction_1	6.08604962188118	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTGTGTATACATA	NA	False	NA	NA	False	AATAAA	-28	NA	86427521	86389614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_86389936_86390036_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
Isoform_177603_98	chr8	-	3146	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	162	-2	162	2	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACGCTGTGGCAAGCA	NA	False	NA	-19	True	AATAAA	-15	NA	86567388	86444204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
Isoform_177604_155	chr8	-	2012	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	162	1132	162	-1132	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCTGTTTTAAGCACT	NA	False	NA	-17	True	AATAAA	-19	NA	86567388	86445338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
Isoform_177605_120	chr8	-	2201	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-27	1132	-27	-1132	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCTGTTTTAAGCACT	NA	False	NA	-17	True	AATAAA	-19	NA	86567577	86445338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
Isoform_17761_76	chr11	-	2661	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	163.123542139079	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7745	False	NA	-3	True	AATAAA	-18	NA	113456606	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
Isoform_177611_67	chr8	-	3352	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-27	-19	-27	19	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGGATAATTACTTTG	NA	False	NA	-2	True	AATAAA	-32	NA	86567577	86444187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
Isoform_177615_459	chr8	-	2115	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	-84	-63	-84	63	multi-exon	FALSE	canonical	3	375	junction_1	0	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAAAAAATTTAATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	87472646	87450571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_87452485_87472444
Isoform_177617_17	chr8	-	2217	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	-175	-74	-175	74	multi-exon	FALSE	canonical	3	375	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTTACTTTAGC	NA	False	NA	NA	False	ATTAAA	-25	NA	87472737	87450560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_87452485_87472444
Isoform_177636_201	chr8	-	6478	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGAGGGTGGTGCTT	NA	False	NA	-8	True	NA	NA	NA	87611895	87567766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
Isoform_177638_14	chr8	-	6522	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	-50	-3	-50	3	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGGTGGTGCTTTCT	NA	False	NA	-5	True	NA	NA	NA	87611936	87567763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
Isoform_17765_16	chr11	-	2744	10	NNC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	160.004012295371	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7775	False	NA	-3	True	AATAAA	-18	NA	113456576	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
Isoform_177650_4	chr8	-	1776	3	FSM	ENSMUSG00000031654.17	ENSMUST00000034076.16	2800	3	7	1017	7	-184	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTGAAACAGCTTTC	107	False	NA	NA	False	AATAAA	-18	NA	88199230	88196049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_88197080_88198319_88198440_88198604
Isoform_177651_3	chr8	-	2346	3	FSM	ENSMUSG00000031654.17	ENSMUST00000034076.16	2800	3	-1	455	-1	7	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGACCCTGTGTTGAAC	99	False	NA	-4	True	AATAAA	-22	NA	88199238	88195487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_88197080_88198319_88198440_88198604
Isoform_177654_290	chr8	-	2343	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	30	1252	30	476	multi-exon	TRUE	canonical	3	463	junction_12	36.2439650148821	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	-5	True	AATAAA	-20	NA	89088792	89058938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
Isoform_177656_123	chr8	-	2425	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	-52	1252	-52	476	multi-exon	FALSE	canonical	3	463	junction_12	36.2439650148821	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	-5	True	AATAAA	-20	NA	89088874	89058938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
Isoform_17766_77	chr11	-	2658	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.708309006834	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7745	False	NA	-3	True	AATAAA	-18	NA	113456606	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
Isoform_177660_13	chr8	-	2423	17	NIC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	-48	475	combination_of_known_junctions	FALSE	canonical	3	37	junction_4	122.717663765246	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCGCTGGTGTGTCAGC	NA	False	NA	-6	True	AATAAA	-19	NA	89088870	89058939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060848_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
Isoform_177662_35	chr8	-	2140	17	NIC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	56	476	combination_of_known_junctions	FALSE	canonical	3	37	junction_4	122.717663765246	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	-5	True	AATAAA	-20	NA	89088586	89058938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060848_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
Isoform_17767_38	chr11	-	2654	10	NNC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_9	132.005985648052	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7775	False	NA	-3	True	AATAAA	-18	NA	113456576	113135679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
Isoform_177676_18	chr8	-	1434	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	1	264	1	-264	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTGAGACTCCAT	NA	False	NA	1	True	AATAAA	-28	NA	89362755	89353454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
Isoform_177677_4	chr8	-	1503	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	-68	264	-68	-264	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTGAGACTCCAT	NA	False	NA	1	True	AATAAA	-28	NA	89362824	89353454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
Isoform_177678_3	chr8	-	1699	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGCAGGATGGAGAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	89362756	89353190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
Isoform_177702_112	chr8	-	5532	3	ISM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	1306	12	1306	-12	3prime_fragment	FALSE	canonical	3	240	junction_1	16.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACAACATATTGTGTCT	NA	False	NA	NA	False	AATACA	-17	NA	89769484	89753874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_89755447_89756571_89760027_89768979
Isoform_177714_12	chr8	-	5274	4	FSM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	-19	10	-19	-10	multi-exon	FALSE	canonical	3	24	junction_3	110.426446107805	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACATATTGTGTCTGT	NA	False	NA	NA	False	AATACA	-19	NA	89770809	89753872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_89755447_89756571_89760027_89768979_89769073_89770657
Isoform_177715_15	chr8	-	5181	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	628	-10	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	100.141011689628	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACATATTGTGTCTGT	NA	False	NA	NA	False	AATACA	-19	NA	89770162	89753872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89770103
Isoform_177716_38	chr8	-	5158	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	651	-10	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	100.141011689628	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACATATTGTGTCTGT	NA	False	NA	NA	False	AATACA	-19	NA	89770139	89753872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89770103
Isoform_177719_4	chr8	-	3359	7	NIC	ENSMUSG00000043668.14	novel	3356	7	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2.6718699236469	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTCCCTTGACTAC	NA	False	NA	NA	False	AATAAA	-18	NA	91074975	90973665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_90975646_90979279_90979361_90980902_90981131_90984502_90984773_90996856_90997109_91001259_91001323_91074490
Isoform_177721_7	chr8	-	3308	7	FSM	ENSMUSG00000043668.14	ENSMUST00000109621.10	3356	7	-22	70	-22	-70	multi-exon	FALSE	canonical	2	4	junction_1	2.82842712474619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGACTGTATTTTGAT	NA	False	NA	NA	False	AATAAA	-16	NA	91074993	90973737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_90975646_90979279_90979361_90980902_90981131_90984502_90984773_90996856_90997112_91001259_91001323_91074490
Isoform_177722_3	chr8	-	3367	7	FSM	ENSMUSG00000043668.14	ENSMUST00000109621.10	3356	7	-10	-1	-10	1	multi-exon	FALSE	canonical	2	4	junction_1	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGGTCCCTTGACTA	NA	False	NA	NA	False	AATAAA	-17	NA	91074981	90973666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_90975646_90979279_90979361_90980902_90981131_90984502_90984773_90996856_90997112_91001259_91001323_91074490
Isoform_177726_39	chr8	-	2113	10	FSM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	27	-969	1	-1	multi-exon	FALSE	canonical	3	139	junction_9	96.0081015100057	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTTTTTAACTTCCA	NA	False	NA	-4	True	AATAAA	-16	NA	91860624	91850127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
Isoform_177728_71	chr8	-	1744	10	FSM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	8	-581	8	-319	multi-exon	FALSE	canonical	3	139	junction_9	96.0081015100057	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860643	91850515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
Isoform_17773_256	chr11	-	2528	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	91	0	91	0	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTAATTGGTTGGTT	NA	False	NA	-8	True	ATTAAA	-24	NA	113574890	113552144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_177731_20	chr8	-	1804	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	7	389	7	-319	multi-exon	FALSE	canonical	3	60	junction_9	146.200581394193	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860618	91850515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
Isoform_177732_17	chr8	-	2133	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	-2	69	-2	1	multi-exon	FALSE	canonical	3	60	junction_9	146.200581394193	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTGTTAAATAATTTTC	NA	False	NA	-72	True	AATAAA	-19	NA	91860627	91850195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
Isoform_177733_8	chr8	-	2200	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	1	-1	1	1	multi-exon	TRUE	canonical	3	60	junction_9	146.200581394193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTTTTAACTTCCAGG	NA	False	NA	-2	True	AATAAA	-18	NA	91860624	91850125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
Isoform_177737_33	chr8	-	2133	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	15	-69	11	-1	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTTTTTAACTTCCA	NA	False	NA	-4	True	AATAAA	-16	NA	91860640	91850127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
Isoform_177738_81	chr8	-	1744	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	16	319	12	-319	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860639	91850515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
Isoform_17774_37	chr11	-	2634	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	-16	1	-16	-1	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCCTAATTGGTTGGT	NA	False	NA	-9	True	ATTAAA	-23	NA	113574997	113552145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_177748_3	chr8	-	2060	4	FSM	ENSMUSG00000031734.14	ENSMUST00000175795.4	2748	4	434	254	282	-254	multi-exon	FALSE	canonical	2	5	junction_1	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGGAAAGGACAAAAGAAA	NA	False	NA	NA	False	AAGAAA	-31	NA	92528261	92525406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_92525605_92526038_92526106_92526300_92527427_92527592
Isoform_177749_4	chr8	-	1127	6	NIC	ENSMUSG00000031736.12	novel	1238	7	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_4	5.31413210223457	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGTTTGTGTAATGG	NA	False	NA	NA	False	AATAAA	-21	NA	93082512	93052660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_93053091_93071480_93071668_93072977_93073092_93073411_93073547_93077318_93077383_93082315
Isoform_17775_162	chr11	-	2584	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	35	0	35	0	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTAATTGGTTGGTT	NA	False	NA	-8	True	ATTAAA	-24	NA	113574946	113552144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_177752_115	chr8	-	3379	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	169	332	169	-332	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGCTGTTAGTTAAAT	NA	False	NA	-40	True	AATAAA	-20	NA	94739301	94698547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_177753_413	chr8	-	3344	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	201	335	201	-335	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAACTGCTGTTAGTTA	NA	False	NA	-43	True	AATAAA	-17	NA	94739269	94698550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_177754_81	chr8	-	3476	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	190	214	190	-214	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGTGGGGGCAGTGG	NA	False	NA	-5	True	AATAAA	-18	NA	94739280	94698429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_177755_252	chr8	-	3449	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	217	214	217	-214	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGTGGGGGCAGTGG	NA	False	NA	-5	True	AATAAA	-18	NA	94739253	94698429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_177756_13	chr8	-	3709	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	170	1	170	-1	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTCTTCCATTTCAGAT	NA	False	NA	-6	True	AATAAA	-16	NA	94739300	94698216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_177757_57	chr8	-	3650	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	230	0	230	0	multi-exon	TRUE	canonical	3	217	junction_1	15.7862947074897	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTTCCATTTCAGATG	NA	False	NA	-5	True	AATAAA	-17	NA	94739240	94698215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_177772_3368	chr8	-	1091	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	12	3907	12	2	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	3368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGGATCCTTTTTTCCC	NA	False	NA	NA	False	ATTAAA	-18	NA	94763647	94746030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
Isoform_17778_462	chr11	-	908	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	116	1595	116	-1595	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATCTAGTTTCCATG	NA	False	NA	-23	True	AATAAA	-7	NA	113574865	113553739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_177781_7	chr8	-	711	2	FSM	ENSMUSG00000031755.7	ENSMUST00000170208.2	491	2	-28	-192	-28	2	multi-exon	FALSE	canonical	3	32	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTTTATAAATTAC	5602	False	NA	-1	True	AATAAA	-17	NA	94796869	94794579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_94795011_94796589
Isoform_177782_30	chr8	-	2633	17	FSM	ENSMUSG00000031755.7	ENSMUST00000034206.6	3064	17	431	0	431	0	multi-exon	FALSE	canonical	1	2	junction_15	7.54569413639329	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTTGTTTATAAATT	NA	False	NA	-3	True	AATAAA	-15	NA	94825125	94794581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395_94807568_94807652_94807798_94808625_94808766_94808983_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94819022_94819251_94824863
Isoform_177785_4	chr8	-	1383	4	FSM	ENSMUSG00000031775.6	ENSMUST00000034227.6	1926	4	-10	553	-10	264	multi-exon	FALSE	canonical	2	4	junction_3	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGGGGTTATCATTCC	407	False	NA	-3	True	AATAAA	-17	NA	95422916	95402074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95402908_95403853_95403977_95405972_95406147_95422663
Isoform_177786_5	chr8	-	1327	4	FSM	ENSMUSG00000031775.6	ENSMUST00000034227.6	1926	4	49	550	49	267	multi-exon	FALSE	canonical	2	4	junction_3	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGGTTATCATTCCTGG	466	False	NA	0	True	AATAAA	-20	NA	95422857	95402071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95402908_95403853_95403977_95405972_95406147_95422663
Isoform_17779_82	chr11	-	1012	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	12	1595	12	-1595	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATCTAGTTTCCATG	NA	False	NA	-23	True	AATAAA	-7	NA	113574969	113553739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_177792_181	chr8	-	1809	9	FSM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	2	-4	-2	4	multi-exon	FALSE	canonical	3	211	junction_8	506.411394026635	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTGTGAGTGTGTCTT	NA	False	NA	-10	True	ATTAAA	-23	NA	95564891	95549184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564581
Isoform_177794_1536	chr8	-	1538	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	72	2749	-21	8	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGAGTGTGTCTTTGTG	NA	False	NA	-6	True	ATTAAA	-27	NA	95564914	95549180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
Isoform_177796_49	chr8	-	1617	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	-6	2748	-6	9	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGAGTGTGTCTTTGTGT	NA	False	NA	-5	True	ATTAAA	-28	NA	95564992	95549179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
Isoform_177797_32	chr8	-	2077	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	71	2211	-22	546	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGCCCATTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	95564915	95548642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
Isoform_17780_311	chr11	-	976	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	48	1595	48	-1595	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATCTAGTTTCCATG	NA	False	NA	-23	True	AATAAA	-7	NA	113574933	113553739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_177807_4	chr8	-	2215	9	FSM	ENSMUSG00000040631.9	ENSMUST00000046461.9	2590	9	-5	380	-5	-380	multi-exon	FALSE	canonical	0	0	junction_8	2.10653744329409	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGCTGGTATTTATTG	NA	False	NA	NA	False	ATTAAA	-12	NA	95602963	95590867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487_95597697_95602758
Isoform_177808_7	chr8	-	2383	9	NIC	ENSMUSG00000063605.6	novel	2304	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	4.99843725578305	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGCAGAGTTCTGAAAG	NA	False	NA	-4	True	AATAAA	-15	NA	95644149	95629500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95643949
Isoform_177810_5	chr8	-	2229	9	FSM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	74	1	74	-1	multi-exon	FALSE	canonical	2	7	junction_8	3.67423461417477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGAGTTCTGAAAGTGT	NA	False	NA	-1	True	AATAAA	-18	NA	95644652	95629497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95644609
Isoform_177812_39	chr8	-	3613	22	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-16	-1	combination_of_known_junctions	TRUE	canonical	3	25	junction_2	22.097495779565	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAATCTGAATCGTCAG	NA	False	NA	-5	True	ATTAAA	-20	NA	95869191	95826456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
Isoform_177814_15	chr8	-	3285	20	FSM	ENSMUSG00000031788.15	ENSMUST00000034240.15	3277	20	-13	5	-13	1	multi-exon	FALSE	canonical	3	25	junction_2	24.0325264354334	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTGCAATCTGAATCG	NA	False	NA	-9	True	ATTAAA	-16	NA	95869188	95826460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
Isoform_177817_106	chr8	-	3536	21	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_17	16.2668374307977	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAATCTGAATCGTCAG	NA	False	NA	-5	True	ATTAAA	-20	NA	95869141	95826456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
Isoform_177819_52	chr8	-	3257	19	NIC	ENSMUSG00000031788.15	novel	3277	20	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	17.8975134489214	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	NA	False	NA	-6	True	ATTAAA	-19	NA	95869184	95826457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
Isoform_177820_34	chr8	-	4390	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	-283	3125	-283	-3125	multi-exon	FALSE	canonical	3	26	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACAGCTCTTCCACTCG	NA	False	NA	-6	True	AGTAAA	-17	NA	96058861	96052763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96056441_96058148
Isoform_177824_398	chr8	-	1226	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	67	2	-6	1	multi-exon	FALSE	canonical	3	468	junction_1	23.7200337267888	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTTTACTTTTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	96161430	96146878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
Isoform_177825_62	chr8	-	1284	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	8	3	8	0	multi-exon	FALSE	canonical	3	468	junction_1	23.7200337267888	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATCTTTACTTTTTT	NA	False	NA	-9	True	AATAAA	-21	NA	96161489	96146879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
Isoform_177827_6	chr8	-	1202	5	FSM	ENSMUSG00000031796.8	ENSMUST00000212684.2	1023	5	-28	-151	11	1	multi-exon	FALSE	canonical	3	46	junction_4	193.603977231874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTTTACTTTTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	96161486	96146878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96161115
Isoform_177828_13	chr8	-	2026	5	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	5	1	intron_retention	FALSE	canonical	3	468	junction_1	23.0054341406547	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTTTACTTTTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	96161419	96146878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96147298_96147763_96148875_96149410_96149523_96151244_96151325_96161115
Isoform_177829_13	chr8	-	2037	5	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	-6	1	intron_retention	FALSE	canonical	3	468	junction_1	23.0054341406547	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTTTACTTTTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	96161430	96146878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96147298_96147763_96148875_96149410_96149523_96151244_96151325_96161115
Isoform_177832_83	chr8	-	1879	12	FSM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	11	1883	11	-5	multi-exon	FALSE	canonical	3	171	junction_1	43.8225195891393	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGATGGAGCGT	NA	False	NA	-11	True	AATAAA	-8	NA	96215444	96174606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
Isoform_177833_25	chr8	-	1965	12	FSM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	-68	1876	-68	2	multi-exon	FALSE	canonical	3	171	junction_1	43.8225195891393	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGGAGCGTATTTAGT	NA	False	NA	-4	True	AATAAA	-15	NA	96215523	96174599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
Isoform_177836_10	chr8	-	1831	12	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	88.3077825721489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGATGGAGCGT	NA	False	NA	-11	True	AATAAA	-8	NA	96215455	96174606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96215030
Isoform_177839_3	chr8	-	5331	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-21	1105	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	89.8287815791798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCTTCTTGATG	NA	False	NA	-2	True	AATAAA	-17	NA	96215476	96176259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214829
Isoform_177840_20	chr8	-	5229	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-108	1658	-61	1105	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCTTCTTGATG	NA	False	NA	-2	True	AATAAA	-17	NA	96215516	96176259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
Isoform_177841_22	chr8	-	1923	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-38	4894	9	499	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCATGTGTTATGTATT	NA	False	NA	-11	True	ATTAAA	-33	NA	96215446	96179495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
Isoform_177843_21	chr8	-	2004	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-118	4893	-71	500	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATGTGTTATGTATTT	NA	False	NA	-10	True	ATTAAA	-34	NA	96215526	96179494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
Isoform_177847_9	chr8	-	5395	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-38	1422	9	1341	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGGCCTTCCCAACTA	NA	False	NA	-34	True	AATAAA	-14	NA	96215446	96176023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
Isoform_177852_3	chr8	-	5465	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-84	1398	-37	1365	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCGTTGCTTCGGACC	NA	False	NA	-10	True	AATAAA	-38	NA	96215492	96175999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
Isoform_177853_6	chr8	-	5077	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-10	1105	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	87.7781293945138	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCTTCTTGATG	NA	False	NA	-2	True	AATAAA	-17	NA	96215423	96176259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96215030
Isoform_177892_35	chr8	-	7695	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	10	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	315.46632081091	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534072	96446773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_177897_32	chr8	-	7709	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	284.722571476751	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534093	96446783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_177899_32	chr8	-	7683	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	13	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	325.564507070241	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534072	96446770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_1779_18	chr10	-	1965	4	FSM	ENSMUSG00000038876.13	ENSMUST00000214896.2	781	4	25	-1209	4	1	multi-exon	FALSE	canonical	3	10	junction_3	95.3601360923712	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAATTTGTTTGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	29238018	29222170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237979
Isoform_177900_81	chr8	-	7656	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	296.058006674321	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTTTGTCTGAAACT	NA	False	NA	-23	True	AATATA	-8	NA	96534060	96446788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_17793_4	chr11	-	1414	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-107	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	70.2723564542463	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600459	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
Isoform_17794_5	chr11	-	1284	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-135	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	63.2926471533105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTGATTCCTTTTCTT	NA	False	NA	-7	True	AATATA	-18	NA	113600487	113588995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_177949_21	chr8	-	7725	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-31	10	combination_of_known_junctions	FALSE	canonical	3	313	junction_31	280.538170184657	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534123	96446773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_17795_4	chr11	-	1206	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	71.497109974417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600845	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600647
Isoform_177950_165	chr8	-	7664	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	313	junction_31	280.538170184657	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534072	96446783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_17796_4	chr11	-	1188	7	ISM	ENSMUSG00000018727.20	ENSMUST00000100248.6	1375	8	558	2	-1	-2	3prime_fragment	FALSE	canonical	3	130	junction_2	29.1514245887839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGCATTGATTCCTTT	NA	False	NA	-11	True	AATATA	-14	NA	113599794	113588999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629
Isoform_177965_441	chr8	-	7652	49	FSM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	33	705	2	0	multi-exon	FALSE	canonical	3	674	junction_30	244.612610932232	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534057	96446783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_177966_53	chr8	-	7699	49	FSM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	-3	694	-1	11	multi-exon	FALSE	canonical	3	674	junction_30	244.612610932232	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTGGGTTTGTGTAA	NA	False	NA	-7	True	AATATA	-24	NA	96534093	96446772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_177974_115	chr8	-	7649	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	313	junction_31	292.082375622538	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534072	96446783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_17798_17	chr11	-	1488	8	FSM	ENSMUSG00000018727.20	ENSMUST00000100248.6	1375	8	-112	-1	-112	1	multi-exon	FALSE	canonical	3	47	junction_7	53.4469028903587	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600464	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
Isoform_177983_304	chr8	-	7666	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	13	combination_of_known_junctions	FALSE	canonical	3	469	junction_30	257.98436106779	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534073	96446770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_178002_113	chr8	-	346	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212289.2	338	3	-18	10	-5	-10	multi-exon	FALSE	canonical	0	0	junction_1	187	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTAAAGTTCAAATAG	NA	False	NA	-14	True	NA	NA	NA	96544324	96535189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96535388_96539051_96539129_96544253
Isoform_178003_3	chr8	-	304	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212957.2	153	3	0	-151	0	-10	multi-exon	FALSE	canonical	3	213	junction_1	80.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTAAAGTTCAAATAG	NA	False	NA	-14	True	NA	NA	NA	96544319	96535189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96535388_96539088_96539129_96544253
Isoform_17801_62	chr11	-	1344	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-127	1	combination_of_known_junctions	FALSE	canonical	3	87	junction_7	41.9649999939211	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600479	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_178015_23	chr8	-	3257	13	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.617479615887	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTCTCCTTTATCTT	NA	False	NA	-2	True	AATAAA	-17	NA	96580120	96562549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_96563104_96563130_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580099
Isoform_178016_791	chr8	-	3258	13	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.7773749669282	791	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTCTCCTTTATCTT	NA	False	NA	-2	True	AATAAA	-17	NA	96580135	96562549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_96563104_96563130_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
Isoform_178020_21	chr8	-	3157	12	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.837257115002	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTCTCCTTTATCTT	NA	False	NA	-2	True	AATAAA	-17	NA	96580140	96562549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_96563104_96563130_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96580113
Isoform_178026_61	chr8	-	3717	12	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	99.8602329043072	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTCTCCTTTATCTT	NA	False	NA	-2	True	AATAAA	-17	NA	96580140	96562549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_96563104_96563130_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
Isoform_17803_3	chr11	-	1429	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-212	1	combination_of_known_junctions	FALSE	canonical	3	87	junction_7	41.9649999939211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600564	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_178043_1320	chr8	-	2383	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	146	1	-9	-1	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTCTGCTTTTCTAC	NA	False	NA	-5	True	AATAAA	-16	NA	96615029	96590762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
Isoform_178046_26	chr8	-	1292	8	ISM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	146	5161	-9	177	5prime_fragment	FALSE	canonical	3	549	junction_7	40.4772548879652	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAGTTCAGTTGAAATA	NA	False	NA	NA	False	AATAAA	-16	NA	96615029	96595922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
Isoform_17805_14	chr11	-	1273	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	55.2692851188707	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600843	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600647
Isoform_178051_270	chr8	-	2381	10	FSM	ENSMUSG00000035824.8	ENSMUST00000050211.7	2406	10	8	17	1	-4	multi-exon	FALSE	canonical	3	48	junction_4	11.1055541659718	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGATGTAAATTCATT	NA	False	NA	-11	True	AATAAA	-13	NA	104975182	104953333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
Isoform_178052_80	chr8	-	2312	9	FSM	ENSMUSG00000035824.8	ENSMUST00000211995.2	2312	9	2	-2	-1	0	multi-exon	FALSE	canonical	3	18	junction_4	19.1012924955355	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAAATTCATTTTCATT	NA	False	NA	-5	True	AATAAA	-19	NA	104975181	104953327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
Isoform_178053_4	chr8	-	2272	8	FSM	ENSMUSG00000035824.8	ENSMUST00000212209.2	756	8	-7	-1509	3	-6	multi-exon	FALSE	canonical	1	4	junction_7	28.0021865035499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCATGATGTAAATTCA	NA	False	NA	-13	True	AATAAA	-11	NA	104975187	104953335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104975032
Isoform_178054_10	chr8	-	1152	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	-3	6585	-3	-6585	multi-exon	FALSE	canonical	3	33	junction_2	2.49443825784929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATGTCACAAGACAGG	NA	False	NA	NA	False	AATAAA	-17	NA	105122442	105081407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
Isoform_178055_8	chr8	-	1223	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	-74	6585	-74	-6585	multi-exon	FALSE	canonical	3	33	junction_2	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATGTCACAAGACAGG	NA	False	NA	NA	False	AATAAA	-17	NA	105122513	105081407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
Isoform_178056_6	chr8	-	7788	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	-74	20	-74	-20	multi-exon	FALSE	canonical	3	33	junction_2	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	105122513	105074842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
Isoform_178057_7	chr8	-	7728	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	-3	9	-3	-9	multi-exon	FALSE	canonical	3	33	junction_2	2.49443825784929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAAAGCGCTTTAGTC	NA	False	NA	NA	False	AATAAA	-22	NA	105122442	105074831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
Isoform_178058_102	chr8	-	3140	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	235	1252	-68	-1252	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTTTTTGTTGTTGTT	2003	False	NA	-7	True	AATATA	-19	NA	105169444	105145563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
Isoform_178059_39	chr8	-	3352	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	25	1250	-7	-1250	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTGTTGTTGTTAT	1793	False	NA	-5	True	AATATA	-21	NA	105169654	105145561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
Isoform_178060_88	chr8	-	4391	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	235	1	-68	-1	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTTTGGTGACTTTGT	2003	False	NA	-2	True	AATAAA	-19	NA	105169444	105144312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
Isoform_178065_23	chr8	-	4617	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	9	1	9	-1	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTTTGGTGACTTTGT	1777	False	NA	-2	True	AATAAA	-19	NA	105169670	105144312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
Isoform_178068_712	chr8	-	1788	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	19	1	-4	-1	multi-exon	FALSE	canonical	3	645	junction_15	52.7352662859429	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGTCTTGTTGTCTGGA	3352	False	NA	NA	False	AATAAA	-18	NA	105261250	105237660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
Isoform_17807_3	chr11	-	1346	8	FSM	ENSMUSG00000018727.20	ENSMUST00000173655.8	1213	8	-132	-1	-126	1	multi-exon	FALSE	canonical	3	9	junction_4	68.8879599088851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600478	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593336_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_178071_83	chr8	-	1733	19	FSM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	1	1	1	-1	multi-exon	FALSE	canonical	3	78	junction_15	163.229558869982	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGTCTTGTTGTCTGGA	3335	False	NA	NA	False	AATAAA	-18	NA	105261267	105237660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
Isoform_178077_31	chr8	-	816	4	FSM	ENSMUSG00000031879.15	ENSMUST00000163140.2	807	4	-16	7	-14	0	multi-exon	FALSE	canonical	3	675	junction_1	52.8288641642889	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTATGCCTTAGCG	NA	False	NA	-10	True	AATAAA	-18	NA	105368347	105366479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942
Isoform_178078_17	chr8	-	2286	2	FSM	ENSMUSG00000069920.11	ENSMUST00000093217.9	2325	2	34	5	34	-5	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATATGTTTCTCTTCT	9997	False	NA	NA	False	ATTAAA	-10	NA	105981749	105979275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105981475_105981662
Isoform_17808_7	chr11	-	1446	7	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-110	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	74.0855361502275	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600462	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590809_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
Isoform_178080_24	chr8	-	1661	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	28	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTGCACGCCTTTAAT	533	False	NA	NA	False	AAAACA	-43	NA	105991213	105984917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
Isoform_178081_100	chr8	-	1406	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	0	283	0	-283	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGGAGATGCTGAGGTCT	505	False	NA	-6	True	AATAAA	-20	NA	105991241	105985200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
Isoform_178082_4	chr8	-	1482	4	NIC	ENSMUSG00000031887.14	novel	1689	5	NA	NA	1	-286	intron_retention	FALSE	canonical	3	50	junction_3	7.78888096369861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCGGAGATGCTGAGG	506	False	NA	-9	True	AATAAA	-17	NA	105991240	105985203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_105985928_105986068_105986620_105987153_105987313_105991192
Isoform_178083_5	chr8	-	2004	3	NIC	ENSMUSG00000031887.14	novel	386	4	NA	NA	7	-286	intron_retention	FALSE	canonical	3	50	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCGGAGATGCTGAGG	518	False	NA	-9	True	AATAAA	-17	NA	105991228	105985203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_105985928_105986068_105987313_105991192
Isoform_178084_3	chr8	-	1658	4	NNC	ENSMUSG00000031887.14	novel	386	4	NA	NA	-1	-286	intron_retention	FALSE	canonical	3	3	junction_2	26.7374061735406	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCGGAGATGCTGAGG	504	False	NA	-9	True	AATAAA	-17	NA	105991242	105985203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_105985928_105986068_105986794_105987153_105987313_105991192
Isoform_178085_3	chr8	-	920	3	NIC	ENSMUSG00000031887.14	novel	386	4	NA	NA	8	-284	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	24.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGGAGATGCTGAGGTC	519	False	NA	-7	True	AATAAA	-19	NA	105991227	105985201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_105985928_105987153_105987313_105991192
Isoform_178086_7	chr8	-	2275	8	FSM	ENSMUSG00000014837.16	ENSMUST00000171788.8	3552	8	3	1274	3	-2	multi-exon	FALSE	canonical	3	15	junction_6	10.3628063333269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGGCTTTGGGTGTCT	NA	False	NA	NA	False	AATAGA	-39	NA	106016157	106008315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400_106015798_106016035
Isoform_178089_3	chr8	-	3514	8	NIC	ENSMUSG00000014837.16	novel	3552	8	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	13.7707172311839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCTTCTGTCTACTC	NA	False	NA	0	True	NA	NA	NA	106016143	106007038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015424_106015798_106016035
Isoform_178090_10	chr8	-	1859	7	FSM	ENSMUSG00000014837.16	ENSMUST00000014981.8	3492	7	361	1272	1	1	multi-exon	FALSE	canonical	3	11	junction_6	11.0302614051829	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTTGGGTGTCTGGT	NA	False	NA	NA	False	AATAGA	-42	NA	106016135	106008312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106016035
Isoform_178092_4	chr8	-	3239	8	NNC	ENSMUSG00000014837.16	novel	3552	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	14.059639731791	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	False	NA	-2	True	NA	NA	NA	106016140	106007040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015694_106015798_106016035
Isoform_178093_4	chr8	-	2422	13	ISM	ENSMUSG00000043251.7	ENSMUST00000057855.4	2497	14	275	-1	117	1	3prime_fragment	FALSE	canonical	3	11	junction_12	6.37486383296843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAATCTATGTGTTGG	NA	False	NA	0	True	AATAAA	-16	NA	106022455	106016554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106021891_106022068_106022257
Isoform_178094_10	chr8	-	2492	14	FSM	ENSMUSG00000043251.7	ENSMUST00000057855.4	2497	14	6	-1	6	1	multi-exon	FALSE	canonical	3	7	junction_13	7.19467258528611	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAATCTATGTGTTGG	NA	False	NA	0	True	AATAAA	-16	NA	106022724	106016554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106021891_106022068_106022257_106022339_106022537
Isoform_178095_3	chr8	-	2346	13	FSM	ENSMUSG00000043251.7	ENSMUST00000212777.2	2161	13	-183	-2	-22	0	multi-exon	FALSE	canonical	1	4	junction_11	8.1594355741613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAATCTATGTGTTG	NA	False	NA	-1	True	AATAAA	-15	NA	106022755	106016555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106022257_106022339_106022537
Isoform_178096_8	chr8	-	2273	7	NIC	ENSMUSG00000041679.10	novel	2304	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.74873708374511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTTCTCTGATGTTCT	6338	False	NA	NA	False	ATTAAA	-14	NA	106052899	106038972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106039578_106039676_106039895_106040052_106040197_106040312_106040529_106041707_106042655_106049896_106049999_106052858
Isoform_178097_7	chr8	-	2329	7	FSM	ENSMUSG00000041679.10	ENSMUST00000210412.2	2304	7	-17	-8	0	1	multi-exon	TRUE	canonical	0	0	junction_1	2.73353657780945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTCTCTGATGTTCTC	6329	False	NA	NA	False	ATTAAA	-15	NA	106052908	106038971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106039578_106039676_106039895_106040052_106040197_106040312_106040529_106041707_106042701_106049896_106049999_106052858
Isoform_178098_5	chr8	-	2526	5	NIC	ENSMUSG00000041679.10	novel	2416	6	NA	NA	-6	0	intron_retention	FALSE	canonical	1	2	junction_1	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGACTTTCTCTGATGTT	6340	False	NA	NA	False	ATTAAA	-12	NA	106052897	106038974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106040197_106040312_106040529_106041707_106042655_106049896_106049999_106052858
Isoform_1781_50	chr10	-	1985	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	-34	-3	-34	3	multi-exon	FALSE	canonical	3	93	junction_2	66.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGTTTGAGTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	29238077	29222168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_29223880_29230287_29230444_29237959
Isoform_17810_8	chr11	-	1325	7	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-148	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	66.4646940529749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600500	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590809_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_178100_6	chr8	-	3938	22	FSM	ENSMUSG00000014778.11	ENSMUST00000014922.5	3928	22	-12	2	-12	-2	multi-exon	FALSE	canonical	0	0	junction_10	2.64789309989673	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGAGCCTTTCTCTTCT	NA	False	NA	-3	True	AATAAA	-17	NA	106074597	106055796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106056112_106056200_106056402_106056478_106056642_106056726_106056920_106057018_106057210_106057760_106057923_106058001_106058122_106058273_106058457_106058668_106058825_106059541_106060237_106061318_106061435_106063013_106063194_106063270_106063429_106063518_106063663_106063754_106063850_106063949_106064062_106064306_106064402_106064483_106064590_106064661_106064730_106065033_106065099_106065485_106065593_106074284
Isoform_178101_5	chr8	-	2972	16	FSM	ENSMUSG00000051648.14	ENSMUST00000167294.8	2979	16	-17	24	-17	-24	multi-exon	FALSE	canonical	0	0	junction_12	1.01105005920687	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAAAAAGTAAATA	NA	False	NA	NA	False	NA	NA	NA	106140151	106109462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106109702_106111362_106111465_106111654_106111810_106111961_106112154_106113381_106114010_106114397_106114513_106114822_106114907_106115096_106115240_106115675_106115780_106116911_106117073_106118504_106118716_106120457_106120590_106121902_106122095_106122961_106123113_106134959_106135257_106140085
Isoform_178102_12	chr8	-	982	4	FSM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	134	11	134	-11	multi-exon	FALSE	canonical	2	4	junction_3	3.55902608401044	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTACCAGGATGGACTGA	NA	False	NA	-11	True	AATAAA	-8	NA	106198024	106194135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197911
Isoform_178103_7	chr8	-	2277	14	FSM	ENSMUSG00000039199.7	ENSMUST00000212303.2	2056	14	-222	1	-190	1	multi-exon	FALSE	canonical	0	0	junction_10	3.75428748981921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTGCGGACTTAATG	NA	False	NA	NA	False	AATAAA	-17	NA	106223724	106199055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820_106211060_106212093_106212141_106214422_106214499_106223441
Isoform_178104_3	chr8	-	1996	13	NIC	ENSMUSG00000039199.7	novel	2056	14	NA	NA	-148	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	3.34477204006491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTGCGGACTTAATG	NA	False	NA	NA	False	AATAAA	-17	NA	106223682	106199055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106212093_106212141_106214422_106214499_106223441
Isoform_178109_1034	chr8	-	1639	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	-14	4	-14	-4	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	1034	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCCTGCTGTCTGTCTG	NA	False	NA	-14	True	AATAAA	-14	NA	106292693	106251100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
Isoform_17811_6	chr11	-	1266	7	NIC	ENSMUSG00000018727.20	novel	1235	7	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	75.416620626137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600876	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590809_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600647
Isoform_178115_235	chr8	-	1415	11	FSM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	1	1738	1	0	multi-exon	TRUE	canonical	3	179	junction_7	13.7637204272682	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427715	106424788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_178116_10	chr8	-	1365	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	60.9681155286196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427715	106424788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106427035_106427334_106427472_106427551
Isoform_178117_3	chr8	-	1347	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	67.7852454902454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427724	106424788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106427078_106427173_106427334_106427472_106427551
Isoform_178118_16	chr8	-	1527	11	ISM	ENSMUSG00000038000.11	ENSMUST00000211870.2	2722	12	2	2297	1	0	5prime_fragment	FALSE	canonical	3	32	junction_7	55.0807588909231	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427715	106424788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426793_106426913_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_178121_3	chr8	-	1656	10	NIC	ENSMUSG00000038000.11	novel	2722	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	32	junction_6	57.9516614233656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427715	106424789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426528_106426635_106426793_106426913_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_178122_4	chr8	-	1787	9	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	202	junction_5	9.88685996664259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427725	106424789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426528_106426635_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_178123_7	chr8	-	1274	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	63.9878460681749	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427726	106424788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_178124_4	chr8	-	1864	8	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	202	junction_4	10.1840210974981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427715	106424789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426528_106426635_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_178125_4	chr8	+	1760	2	NNC	ENSMUSG00000005699.17	novel	1179	3	NA	NA	1446	1449	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTACTTCCTTCGGCCT	NA	False	NA	NA	False	NA	NA	NA	106429726	106431577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_106430653_106430743
Isoform_178126_5	chr8	-	1549	6	FSM	ENSMUSG00000013155.11	ENSMUST00000212716.2	1568	6	18	1	18	0	multi-exon	FALSE	canonical	3	158	junction_2	9.8508882848198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTGTTCCATAGGAG	NA	False	NA	-15	True	ATTAAA	-14	NA	106434759	106430283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180
Isoform_178128_18	chr8	-	1538	7	FSM	ENSMUSG00000013155.11	ENSMUST00000013299.11	1275	7	-260	-3	17	2	multi-exon	FALSE	canonical	3	158	junction_2	11.5854314646552	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	-12	True	ATTAAA	-17	NA	106434825	106430280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455
Isoform_17813_4	chr11	-	1202	6	NIC	ENSMUSG00000018727.20	novel	1213	8	NA	NA	-119	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	82.8241510671857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600471	113588996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_113589493_113590661_113590809_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_178135_36	chr8	-	2039	3	FSM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	57	2256	-11	1307	multi-exon	FALSE	canonical	3	21	junction_1	4	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATGGTGTGTGGTCGTT	NA	False	NA	NA	False	AGTAAA	-20	NA	106485239	106442741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106444283_106454619_106454964_106485085
Isoform_178137_3	chr8	-	4037	2	ISM	ENSMUSG00000013150.16	ENSMUST00000155038.3	951	4	17	7038	-17	2646	5prime_fragment	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAATATGCATGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	106485245	106451086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_106454964_106485085
Isoform_17814_17	chr11	-	2883	2	FSM	ENSMUSG00000041598.8	ENSMUST00000131488.2	727	2	-25	-2131	-25	0	multi-exon	FALSE	canonical	3	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	NA	False	NA	-2	True	ATTAAA	-15	NA	113630173	113617677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113620492_113630104
Isoform_178140_75	chr8	-	5161	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	143	4	-2	-4	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTGTCTGTTGTTCA	NA	False	NA	-5	True	ATTAAA	-15	NA	106553839	106494943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
Isoform_178142_39	chr8	-	1833	14	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	76.1652672088405	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCGATATTGTATTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	106578640	106571300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106572854_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
Isoform_178143_14	chr8	-	1922	13	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	26	junction_3	56.8391370448215	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTAGCGATATTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106578640	106571305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
Isoform_178148_555	chr8	-	1774	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	46	-6	0	2	multi-exon	FALSE	canonical	3	157	junction_3	25.0593739391514	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAGCGATATTGTATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	106578640	106571302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
Isoform_178151_24	chr8	-	1743	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	63.6958163837578	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGATATTGTATTTCTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	106578640	106571298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576402_106578502
Isoform_178152_14	chr8	-	1894	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	157	junction_3	26.0254166931019	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTAGCGATATTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106578644	106571305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576556_106578502
Isoform_178154_18	chr8	-	1915	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	12	junction_10	64.1737053847596	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106578638	106571306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576182_106576257_106576556_106578502
Isoform_178155_10	chr8	-	1875	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	2	intron_retention	FALSE	canonical	3	157	junction_3	25.3106321369806	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAGCGATATTGTATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	106578640	106571302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106576154_106576257_106576346_106576464_106576556_106578502
Isoform_178158_21	chr8	-	2648	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	191	junction_9	18.3816293489087	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTAGCGATATTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106578638	106571305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106571628_106571705_106571811_106571891_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
Isoform_178163_36	chr8	-	568	3	FSM	ENSMUSG00000031897.10	ENSMUST00000212938.2	646	3	89	-11	87	2	multi-exon	FALSE	canonical	3	246	junction_1	9	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAAGGCTGTGTCTTTC	NA	False	NA	-5	True	AATAAA	-22	NA	106663570	106662364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106662538_106662627_106662780_106663327
Isoform_178165_46	chr8	-	452	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212686.2	554	4	105	-3	92	2	multi-exon	FALSE	canonical	3	157	junction_3	46.7784375778224	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAAGGCTGTGTCTTTC	NA	False	NA	-5	True	AATAAA	-22	NA	106663565	106662364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497
Isoform_178166_19	chr8	-	554	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212686.2	554	4	3	-3	3	2	multi-exon	FALSE	canonical	3	157	junction_3	46.7784375778224	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAAGGCTGTGTCTTTC	NA	False	NA	-5	True	AATAAA	-22	NA	106663667	106662364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497
Isoform_178167_7	chr8	-	949	8	FSM	ENSMUSG00000031897.10	ENSMUST00000034369.10	1311	8	362	0	10	0	multi-exon	FALSE	canonical	1	3	junction_7	110.839468399582	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAAACAGAAGGCTGTG	NA	False	NA	-11	True	AATAAA	-16	NA	106664714	106662370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497_106663614_106663872_106664014_106664125_106664224_106664310_106664399_106664586
Isoform_178173_18	chr8	-	3807	24	FSM	ENSMUSG00000017765.18	ENSMUST00000034370.17	3811	24	6	-2	6	-1	multi-exon	FALSE	canonical	2	4	junction_23	38.1304595706627	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTGCTCCGGCTCTT	NA	False	NA	-2	True	AATAAA	-20	NA	106692723	106670222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692550
Isoform_178174_435	chr8	-	3801	24	FSM	ENSMUSG00000017765.18	ENSMUST00000116429.9	3755	24	-47	1	6	-1	multi-exon	FALSE	canonical	3	126	junction_15	19.3746272602721	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTGCTCCGGCTCTT	NA	False	NA	-2	True	AATAAA	-20	NA	106692723	106670222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
Isoform_178175_101	chr8	-	3825	24	FSM	ENSMUSG00000017765.18	ENSMUST00000116429.9	3755	24	-70	0	-17	0	multi-exon	FALSE	canonical	3	126	junction_15	19.3746272602721	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGCTCCGGCTCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	106692746	106670221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
Isoform_178177_6	chr8	-	3957	23	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	-35	0	intron_retention	FALSE	canonical	3	126	junction_14	19.6526132260209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGCTCCGGCTCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	106692764	106670221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
Isoform_178179_67	chr8	-	1699	10	FSM	ENSMUSG00000031898.10	ENSMUST00000034371.9	1698	10	-7	6	-7	-6	multi-exon	FALSE	canonical	3	28	junction_5	8.79955105476592	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAAGTGTCTGAGCCCTC	NA	False	NA	-5	True	AATAAA	-15	NA	106706068	106700150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106700484_106701326_106701463_106701813_106701890_106702751_106702837_106703892_106704070_106704191_106704262_106704531_106704674_106704773_106704904_106705343_106705471_106705645
Isoform_178184_4	chr8	-	3417	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	119	0	-42	0	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGCTCTACATGTTAA	NA	False	NA	NA	False	TATAAA	-19	NA	106863487	106856950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
Isoform_178186_3	chr8	-	1369	4	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-35	-1	-33	1	intron_retention	FALSE	canonical	3	127	junction_1	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTGGTGGTTTTTCTGT	NA	False	NA	-5	True	NA	NA	NA	106937600	106927347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996
Isoform_178187_9	chr8	-	1611	4	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-2	-276	0	276	intron_retention	FALSE	canonical	3	127	junction_1	3.29983164553722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAAGCAGTTCTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	106937567	106927072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996
Isoform_178189_96	chr8	-	1522	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	2	-278	2	278	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCAGTTCTTTTTTAG	NA	False	NA	-3	True	AATAAA	-21	NA	106937563	106927070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
Isoform_178190_106	chr8	-	1248	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-2	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCCTGGTGGTTTTTCTG	NA	False	NA	-6	True	NA	NA	NA	106937567	106927348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
Isoform_178192_3	chr8	-	1588	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-64	-278	-62	278	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCAGTTCTTTTTTAG	NA	False	NA	-3	True	AATAAA	-21	NA	106937629	106927070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
Isoform_178195_22	chr8	-	1619	4	NNC	ENSMUSG00000033106.7	novel	1246	5	NA	NA	0	276	intron_retention	FALSE	canonical	3	16	junction_2	53.0471488394994	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAAGCAGTTCTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	106937567	106927072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_106927782_106928862_106928992_106930962_106931173_106936996
Isoform_178197_9	chr8	-	1528	5	NNC	ENSMUSG00000033106.7	novel	1246	5	NA	NA	2	276	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	49.2512690191837	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAAGCAGTTCTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	106937563	106927072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_106927782_106928862_106928992_106930962_106931173_106936996_106937264_106937350
Isoform_1782_6	chr10	-	2187	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	-37	-202	-37	202	multi-exon	FALSE	canonical	3	93	junction_2	66.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCATAGGTCGTGA	NA	False	NA	NA	False	AATAAA	-11	NA	29238080	29221969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_29223880_29230287_29230444_29237959
Isoform_178204_904	chr8	-	2900	4	FSM	ENSMUSG00000046691.15	ENSMUST00000177068.8	2931	4	1	30	1	1	multi-exon	FALSE	canonical	3	308	junction_2	18.5472369909914	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620224	107610524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107620132
Isoform_178206_33	chr8	-	2877	3	FSM	ENSMUSG00000046691.15	ENSMUST00000176090.2	615	3	-80	-2182	-2	0	multi-exon	FALSE	canonical	2	13	junction_2	168.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTGTTTTTTTTA	NA	False	NA	0	True	AATAAA	-44	NA	107620227	107610494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107613159_107613551_107613670_107620132
Isoform_178207_29	chr8	-	2915	4	FSM	ENSMUSG00000046691.15	ENSMUST00000176515.2	694	4	8	-2229	0	1	multi-exon	FALSE	canonical	3	5	junction_2	154.848312874245	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620225	107610524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107613159_107613551_107613684_107613932_107613989_107620132
Isoform_178208_168	chr8	-	2782	3	FSM	ENSMUSG00000117748.2	ENSMUST00000176437.9	369	3	-1	-2412	1	-3	multi-exon	FALSE	canonical	3	66	junction_1	124	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620224	107610524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107613159_107613932_107613989_107620132
Isoform_178209_24	chr8	-	2738	2	FSM	ENSMUSG00000117748.2	ENSMUST00000169312.2	2730	2	-11	3	-11	-3	multi-exon	FALSE	canonical	2	13	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620236	107610524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107613159_107620132
Isoform_178210_29	chr8	-	3293	3	NIC	ENSMUSG00000046691.15	novel	2931	4	NA	NA	1	1	intron_retention	FALSE	canonical	3	308	junction_1	3	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620224	107610524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_107613670_107613932_107613989_107620132
Isoform_178216_272	chr8	-	1536	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	1	-231	1	231	multi-exon	FALSE	canonical	3	275	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTGGTAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	107775245	107772920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107773904_107774692
Isoform_178221_18	chr8	-	1730	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	1	-425	1	425	multi-exon	FALSE	canonical	3	275	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGAGGACTGTGAGGTC	NA	False	NA	NA	False	AGTAAA	-19	NA	107775245	107772726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107773904_107774692
Isoform_178224_12	chr8	-	3680	6	NIC	ENSMUSG00000031916.18	novel	2954	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	128	junction_5	53.4093624751316	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTGGTAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	107783314	107772920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_107773904_107774692_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
Isoform_178225_58	chr8	-	2956	6	FSM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	4	-6	4	0	multi-exon	FALSE	canonical	3	27	junction_1	47.5116827738189	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTGGTAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	107783312	107772920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107773904_107775414_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
Isoform_178226_9	chr8	-	3004	6	FSM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	-39	-11	-34	5	multi-exon	FALSE	canonical	3	27	junction_1	47.5116827738189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTAGCCACTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	107783355	107772915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107773904_107775414_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
Isoform_178229_673	chr8	-	2049	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	7	2420	2	-2414	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	107783314	107775340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
Isoform_17823_1062	chr11	-	2948	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	60	0	60	0	multi-exon	FALSE	canonical	3	115	junction_1	0	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7423	False	NA	-2	True	ATTAAA	-15	NA	113642647	113617677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_113620492_113642513
Isoform_178230_13	chr8	-	2127	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	-71	2420	-71	-2414	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	107783392	107775340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
Isoform_178234_9	chr8	-	1909	4	NIC	ENSMUSG00000031916.18	novel	4476	5	NA	NA	-22	-2414	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	63.2297398381489	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	107783343	107775340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_107775763_107778844_107779673_107780653_107780862_107782892
Isoform_178236_3	chr8	-	2132	10	FSM	ENSMUSG00000031921.18	ENSMUST00000133925.8	2666	10	5	529	5	-1	multi-exon	FALSE	canonical	3	17	junction_3	8.85688683705762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	107823172	107796560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_178237_5	chr8	-	2511	10	FSM	ENSMUSG00000031921.18	ENSMUST00000133925.8	2666	10	154	1	123	1	multi-exon	FALSE	canonical	3	17	junction_3	8.85688683705762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTCTAGCTGGTTCTT	NA	False	NA	-1	True	ATTAAA	-16	NA	107823023	107796032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_178238_16	chr8	-	2668	10	FSM	ENSMUSG00000031921.18	ENSMUST00000068421.13	2667	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	17	junction_3	7.27247474309048	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTCTAGCTGGTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	107823178	107796033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_17824_19	chr11	-	2948	2	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	-437	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	6926	False	NA	-2	True	ATTAAA	-15	NA	113643144	113617677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113620492_113643010
Isoform_178242_5	chr8	-	2470	7	ISM	ENSMUSG00000031921.18	ENSMUST00000068388.15	1915	11	-37	5591	-4	-2	5prime_fragment	FALSE	canonical	3	17	junction_1	8.76387788342327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCTTGTCCTTGCGTGA	NA	False	NA	-1	True	NA	NA	NA	107823183	107802150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_178244_20	chr8	-	1720	7	ISM	ENSMUSG00000031921.18	ENSMUST00000068388.15	1915	11	-43	6347	-10	44	5prime_fragment	FALSE	canonical	3	17	junction_1	8.76387788342327	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCAGTGAGCACTTAGC	NA	False	NA	-6	True	NA	NA	NA	107823189	107802906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_178245_7	chr8	-	2469	7	FSM	ENSMUSG00000031921.18	ENSMUST00000116425.3	2471	7	0	2	0	-2	multi-exon	FALSE	canonical	3	29	junction_6	4.88762609953839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCTTGTCCTTGCGTGA	NA	False	NA	-1	True	NA	NA	NA	107823179	107802150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_17825_38	chr11	-	2906	2	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	-395	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	6968	False	NA	-2	True	ATTAAA	-15	NA	113643102	113617677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113620492_113643010
Isoform_178250_15	chr8	-	1607	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	-56	2	-56	-2	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGGTGGCGCATGCCT	NA	False	NA	-4	True	AATAAA	-16	NA	108129894	108114858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
Isoform_178251_140	chr8	-	1551	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	3	-1	3	1	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGGCGCATGCCTTTA	NA	False	NA	-1	True	AATAAA	-19	NA	108129835	108114855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
Isoform_178253_6	chr8	-	1787	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	2	-236	2	236	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAATAAAGCG	NA	False	NA	NA	False	AGTAAA	-35	NA	108129836	108114620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
Isoform_178255_3	chr8	-	1475	6	NNC	ENSMUSG00000003849.9	novel	1553	6	NA	NA	5908	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	56.9750822728673	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGGCGCATGCCTTTA	NA	False	NA	-1	True	AATAAA	-19	NA	108123930	108114855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108123868
Isoform_178258_1641	chr8	-	1647	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	12	-1	4	1	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTTGTTTTATTTG	NA	False	NA	-2	True	AATAAA	-15	NA	108151669	108139119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
Isoform_17826_20	chr11	-	3005	2	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	81	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCTAGTGTCTGACTCT	7444	False	NA	-4	True	ATTAAA	-13	NA	113642626	113617679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_113620492_113642433
Isoform_178261_26	chr8	-	1631	9	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	161.008540146167	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTTTTTGTTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	108151669	108139121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151383_108151503_108151597
Isoform_178263_68	chr8	-	2388	8	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	4	-1	intron_retention	FALSE	canonical	3	448	junction_3	29.242825737997	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTTTTTGTTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	108151669	108139121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_108139816_108142737_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
Isoform_17827_3	chr11	-	1442	6	ISM	ENSMUSG00000015542.18	ENSMUST00000103039.2	1158	7	8	0	8	0	intron_retention	FALSE	canonical	2	2	junction_5	44.6345157921535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078173	115073657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574
Isoform_178273_1699	chr8	-	1548	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	34	-1	28	1	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	1699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCTAGTGGTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	108315062	108307011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
Isoform_17828_36	chr11	-	1164	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	-21	0	2	0	multi-exon	FALSE	canonical	2	2	junction_5	51.0217818409179	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078179	115073657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077661_115077944
Isoform_178286_100	chr8	-	4220	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	243	0	243	0	multi-exon	TRUE	canonical	3	61	junction_24	17.2223966609053	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110292250	110274642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
Isoform_178287_20	chr8	-	4454	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	9	0	9	0	multi-exon	FALSE	canonical	3	61	junction_24	17.2223966609053	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110292484	110274642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
Isoform_178289_21	chr8	-	4334	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	124	5	124	-5	multi-exon	FALSE	canonical	3	61	junction_24	17.2223966609053	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTATTGCATTTTAAA	NA	False	NA	-7	True	AATAAA	-14	NA	110292369	110274647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
Isoform_17829_157	chr11	-	1156	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103040.11	1204	7	48	0	-10	0	multi-exon	FALSE	canonical	2	2	junction_5	40.7553677446297	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078168	115073657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077944
Isoform_178291_105	chr8	-	4217	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	243	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_24	18.695314731221	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110292250	110274642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
Isoform_178292_37	chr8	-	4334	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	122	-4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_24	18.695314731221	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTATTGCATTTTAAAT	NA	False	NA	-6	True	AATAAA	-15	NA	110292371	110274646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
Isoform_178294_14	chr8	-	4454	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_24	18.695314731221	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTATTGCATTTTAAAT	NA	False	NA	-6	True	AATAAA	-15	NA	110292491	110274646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
Isoform_178299_629	chr8	-	1794	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	244	1	-13	-1	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAGAATATATTGTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	110335011	110320109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
Isoform_178300_29	chr8	-	1838	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	203	-2	0	2	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAATATATTGTTATTGC	NA	False	NA	NA	False	AATAAA	-21	NA	110335052	110320106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
Isoform_178303_16	chr8	-	2104	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	-55	-10	-5	10	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTATTGCTTAAACAT	NA	False	NA	NA	False	AATAAA	-29	NA	110335310	110320098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
Isoform_178308_30	chr8	-	1905	9	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	23	junction_8	169.433615318803	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAGAATATATTGTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	110335310	110320109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110335171
Isoform_17831_3	chr11	-	1157	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103039.2	1158	7	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_6	52.6331644498029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078180	115073657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077955
Isoform_178314_17	chr8	-	2520	7	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	350	junction_6	48.3517206404166	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAGAATATATTGTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	110335024	110320109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_110320764_110321251_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
Isoform_178317_22	chr8	-	2468	11	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	245.924866575139	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGTCAAATGAGTGAAT	NA	False	NA	-8	True	AATAAA	-25	NA	110419891	110397951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_110399274_110402007_110402057_110402274_110402435_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
Isoform_17832_174	chr11	-	1876	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	69	3	-67	-3	multi-exon	FALSE	canonical	3	83	junction_7	15.1766458254911	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCATGGCTGATAGCTA	NA	False	NA	-3	True	AATAAA	-14	NA	115167807	115158852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
Isoform_178324_998	chr8	-	2321	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	-19	2	-19	1	multi-exon	FALSE	canonical	3	462	junction_2	71.0226880807973	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGTGTTGGTCAAATG	NA	False	NA	-15	True	AATAAA	-18	NA	110419911	110397958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
Isoform_178326_14	chr8	-	2917	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	462	junction_2	70.3738898669102	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTAGTGTTGGTCAAAT	NA	False	NA	-16	True	AATAAA	-17	NA	110419873	110397959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_110399274_110402007_110402057_110403389_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
Isoform_178329_65	chr8	-	4296	8	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-20	4	intron_retention	FALSE	canonical	3	544	junction_2	46.3676523416214	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGTCAAATGAGTGAA	NA	False	NA	-9	True	AATAAA	-24	NA	110419912	110397952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_110399274_110402007_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
Isoform_17833_4	chr11	-	1964	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	-19	3	-19	-3	multi-exon	FALSE	canonical	3	83	junction_7	15.1766458254911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCATGGCTGATAGCTA	NA	False	NA	-3	True	AATAAA	-14	NA	115167895	115158852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
Isoform_178333_111	chr8	-	2275	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	212.348144270205	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTGGTCAAATGAGT	NA	False	NA	-12	True	AATAAA	-21	NA	110419911	110397955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_110399274_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
Isoform_17834_5	chr11	-	1778	12	NNC	ENSMUSG00000018861.9	novel	1948	12	NA	NA	-191	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	32.3513766360558	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	0	True	AATAAA	-17	NA	115168067	115158849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167995
Isoform_178340_3	chr8	-	2835	4	FSM	ENSMUSG00000069895.5	ENSMUST00000212726.2	461	4	-4	-2370	-4	2370	multi-exon	FALSE	canonical	3	22	junction_3	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCTCCCTCCCGTC	NA	False	NA	NA	False	AGTAAA	-17	NA	110464375	110457777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110460375_110461936_110461996_110462091_110462158_110464262
Isoform_178341_3	chr8	-	7465	3	FSM	ENSMUSG00000069895.5	ENSMUST00000212605.2	7439	3	-27	1	-10	-1	multi-exon	FALSE	canonical	3	17	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTTGCGCCTTT	NA	False	NA	-5	True	NA	NA	NA	110464381	110453087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110460375_110461936_110461996_110464262
Isoform_178342_9	chr8	-	2445	3	FSM	ENSMUSG00000001672.15	ENSMUST00000051430.7	2447	3	3	-1	3	1	multi-exon	TRUE	canonical	0	0	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGCCTTGGATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	110688832	110679541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110681374_110686344_110686473_110688347
Isoform_178343_188	chr8	-	1442	11	FSM	ENSMUSG00000003657.10	ENSMUST00000003754.8	1431	11	-6	-5	-2	5	multi-exon	FALSE	canonical	3	153	junction_9	44.1960405466372	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTTTCTTGTCGTGGGC	7610	False	NA	-7	True	AATAAA	-27	NA	110894844	110869164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110881375_110883551_110883629_110894675
Isoform_178344_68	chr8	-	1137	9	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	15147	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_8	57.2319840648566	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCACCCGTTTCTTGTCG	NA	False	NA	-12	True	AATAAA	-22	NA	110879691	110869169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110879655
Isoform_178346_12	chr8	-	1783	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-13307	-1	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_6	7.54247233265651	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGATGGTGAACCTGG	NA	False	NA	-13	True	ATTAAA	-26	NA	111482637	111468461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111482403
Isoform_178349_3	chr8	-	1836	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-13569	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	15.2470397855525	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTCTGATGGTGAACCT	NA	False	NA	-15	True	ATTAAA	-24	NA	111482899	111468463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111482610
Isoform_17835_3	chr11	-	2032	11	NIC	ENSMUSG00000018861.9	novel	1948	12	NA	NA	39	0	intron_retention	FALSE	canonical	3	83	junction_6	15.8899339205674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	0	True	AATAAA	-17	NA	115167837	115158849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
Isoform_178350_4	chr8	-	1753	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-13291	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	13.2623108427185	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCTTGCATCTCTGAT	NA	False	NA	-24	True	ATTAAA	-15	NA	111482621	111468472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_111469081_111469275_111469412_111474874_111475034_111475294_111475373_111476056_111476191_111481862_111482283_111482403
Isoform_17836_3	chr11	-	1726	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	-47	3272	-47	-3272	multi-exon	FALSE	canonical	2	4	junction_5	1.6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTGCTTTGTTCCATG	382	False	NA	NA	False	NA	NA	NA	115188387	115173719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
Isoform_17837_3	chr11	-	1266	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	-62	3747	-62	-3747	multi-exon	FALSE	canonical	2	4	junction_5	1.6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGGCTGTGCATCCTGA	367	False	NA	NA	False	AAGAAA	-11	NA	115188402	115174194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
Isoform_17838_24	chr11	-	3242	19	FSM	ENSMUSG00000034586.15	ENSMUST00000044152.13	3236	19	-8	2	-8	-2	multi-exon	FALSE	canonical	2	4	junction_16	3.67045259092421	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTTGTGTCTCTGTAC	8689	False	NA	-2	True	AATAAA	-13	NA	115258553	115238534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250635_115251147_115251319_115252464_115252615_115258369
Isoform_178383_1657	chr8	-	4276	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-4	253	-4	-253	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
Isoform_178389_37	chr8	-	4393	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_25	174.818195849288	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573189
Isoform_17839_10	chr11	-	3249	19	FSM	ENSMUSG00000034586.15	ENSMUST00000106542.9	3276	19	28	-1	-9	1	multi-exon	FALSE	canonical	1	2	junction_16	3.88928569404159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTGTCTCTGTACATG	8688	False	NA	1	True	AATAAA	-16	NA	115258554	115238531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250638_115251147_115251319_115252464_115252615_115258369
Isoform_178402_195	chr8	-	3820	24	FSM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	12	6	1	-6	multi-exon	FALSE	canonical	3	94	junction_23	12.3354193641104	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGTCTTCAGAAAACTG	1255	False	NA	-13	True	AATAAA	-13	NA	111629079	111609100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
Isoform_178403_3	chr8	-	4336	23	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	94	junction_22	12.265654527653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCAGAAAACTGTTTT	1250	False	NA	-9	True	AATAAA	-17	NA	111629084	111609096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
Isoform_178404_5	chr8	-	3922	24	FSM	ENSMUSG00000033703.10	ENSMUST00000212971.2	3972	24	41	9	1	-2	multi-exon	TRUE	canonical	1	1	junction_11	26.4236961878319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCAGAAAACTGTTTT	1255	False	NA	-9	True	AATAAA	-17	NA	111629079	111609096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616471_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
Isoform_178405_8	chr8	-	3598	23	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	3	8	junction_6	25.2077319897312	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGTCTTCAGAAAACTG	1255	False	NA	-13	True	AATAAA	-13	NA	111629079	111609100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
Isoform_178409_236	chr8	-	2546	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	5	-4	5	4	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTGTACACTTGAGG	7691	False	NA	-24	True	ATTAAA	-14	NA	111724427	111701623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
Isoform_178412_77	chr8	-	2990	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	5	-448	5	448	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTATGTATAGTGT	7691	False	NA	-23	True	NA	NA	NA	111724427	111701179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
Isoform_178417_14	chr8	-	810	7	FSM	ENSMUSG00000015023.8	ENSMUST00000173183.2	731	7	-25	-54	5	54	multi-exon	FALSE	canonical	3	259	junction_3	37.1786228900426	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGTGTCATGGGCT	7691	False	NA	NA	False	AATAAA	-22	NA	111724427	111707050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
Isoform_178422_35	chr8	-	1759	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	28	4825	28	-1354	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCATCTTTTTTTTTTG	NA	False	NA	1	True	AATACA	-19	NA	111754368	111734644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
Isoform_178424_34	chr8	-	6587	13	NNC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.332125123752	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGGTATTTTGTCTGC	NA	False	NA	-5	True	AATAAA	-17	NA	111754395	111729819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_111732429_111732452_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
Isoform_178426_33	chr8	-	6586	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	28	-2	28	2	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTATTTTGTCTGCAT	NA	False	NA	-3	True	AATAAA	-19	NA	111754368	111729817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
Isoform_178430_72	chr8	-	6525	13	NNC	ENSMUSG00000033658.17	novel	3104	12	NA	NA	28	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.240162943315	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTATTTTGTCTGCAT	NA	False	NA	-3	True	AATAAA	-19	NA	111758355	111729817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_111732429_111732452_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
Isoform_178431_9	chr8	-	6523	13	NNC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.061909664126	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGGTATTTTGTCTGC	NA	False	NA	-5	True	AATAAA	-17	NA	111758357	111729819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_111732429_111732452_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758255
Isoform_17845_14	chr11	-	1930	5	FSM	ENSMUSG00000034566.11	ENSMUST00000180072.8	486	5	-1391	-53	19	-6	multi-exon	FALSE	canonical	3	2962	junction_4	275.878936310839	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTATCGTCTCTGAGTAG	NA	False	NA	-9	True	AATAAA	-16	NA	115310724	115306520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211
Isoform_178453_315	chr8	-	8126	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	7	-1112	7	1112	multi-exon	TRUE	canonical	3	407	junction_22	36.1425178978997	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCGAATATTCTCTGTA	6435	False	NA	-10	True	AATAAA	-18	NA	111985841	111879940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
Isoform_178489_622	chr8	-	4417	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	26	0	-5	0	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5522	False	NA	-9	True	AATAAA	-17	NA	112026828	111997575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
Isoform_178490_397	chr8	-	4452	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	-9	0	-9	0	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5487	False	NA	-9	True	AATAAA	-17	NA	112026863	111997575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
Isoform_178495_4	chr8	-	2532	3	ISM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	63079	-15	31740	15	3prime_fragment	FALSE	canonical	3	67	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTCTGATGTCCTTTG	NA	False	NA	-4	True	AGTAAA	-31	NA	112185645	112175413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_112177712_112185242_112185386_112185554
Isoform_178496_5	chr8	-	3564	26	NIC	ENSMUSG00000031959.16	novel	3618	27	NA	NA	-6	-111	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	12.3667942491173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCAGCATTCTTTTTC	NA	False	NA	-3	True	TATAAA	-33	NA	112248730	112176950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_112177712_112185242_112185386_112185554_112185679_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_178497_4	chr8	-	5070	27	NNC	ENSMUSG00000031959.16	novel	3618	27	NA	NA	-8	14	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.8293294982583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTGATGTCCTTT	NA	False	NA	-5	True	AGTAAA	-30	NA	112248732	112175414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_112176733_112176764_112177712_112185242_112185386_112185554_112185679_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_178498_5	chr8	-	3628	27	FSM	ENSMUSG00000031959.16	ENSMUST00000034437.8	4896	27	-30	1298	-8	-109	multi-exon	FALSE	canonical	2	3	junction_9	16.2917647181985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGCATTCTTTTTCTT	NA	False	NA	-1	True	TATAAA	-35	NA	112248732	112176948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112199261_112199319_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_178499_5	chr8	-	3753	27	FSM	ENSMUSG00000031959.16	ENSMUST00000034437.8	4896	27	-44	1187	-22	2	multi-exon	FALSE	canonical	2	3	junction_9	16.2917647181985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTCTGTTTCTCTTC	NA	False	NA	NA	False	AAGAAA	-12	NA	112248746	112176837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112199261_112199319_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_17850_1119	chr11	-	587	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	35	3	-10	-3	multi-exon	FALSE	canonical	3	1974	junction_5	551.930285452792	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCGTCTCTGAGTAGATA	NA	False	NA	-6	True	AATAAA	-19	NA	115310753	115306517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
Isoform_178500_56	chr8	-	3569	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	-8	1522	-8	-111	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCAGCATTCTTTTTC	NA	False	NA	-3	True	TATAAA	-33	NA	112248732	112176950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_178503_37	chr8	-	5054	27	NNC	ENSMUSG00000031959.16	novel	4896	27	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.3961047062859	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGTACTAACACAGTCTG	NA	False	NA	-14	True	AGTAAA	-21	NA	112248722	112175423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_112176733_112176764_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_178504_5	chr8	-	4007	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	-8	1084	-8	327	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCGCAAGAGTCTCATAA	NA	False	NA	NA	False	NA	NA	NA	112248732	112176512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_178505_9	chr8	-	5023	27	NNC	ENSMUSG00000031959.16	novel	4896	27	NA	NA	22	12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.3961047062859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACACAGTCTGATGTCCT	NA	False	NA	-7	True	AGTAAA	-28	NA	112248680	112175416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_112176737_112176764_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_178507_3	chr8	-	3707	25	NIC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	10	-111	intron_retention	FALSE	canonical	3	54	junction_4	5.6856300344719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCAGCATTCTTTTTC	NA	False	NA	-3	True	TATAAA	-33	NA	112248714	112176950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_178508_4	chr8	-	1808	7	ISM	ENSMUSG00000031958.17	ENSMUST00000070004.4	2273	11	1160	1	-627	-1	3prime_fragment	FALSE	canonical	2	7	junction_4	3.60555127546399	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCCCATCCCTATCC	NA	False	NA	NA	False	AATACA	-14	NA	112355846	112352903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355353_112355617
Isoform_178509_3	chr8	-	2449	7	ISM	ENSMUSG00000031958.17	ENSMUST00000070004.4	2273	11	1157	-637	-630	-131	3prime_fragment	FALSE	canonical	2	7	junction_4	3.60555127546399	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCGTTGAAGATTCAACAAT	NA	False	NA	NA	False	AATACA	-21	NA	112355849	112352265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355353_112355617
Isoform_178511_454	chr8	-	3095	7	FSM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	22	-1	-9	1	multi-exon	FALSE	canonical	3	127	junction_1	13.2591687354659	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCCTACAGAAATGCT	NA	False	NA	-4	True	AATAAA	-15	NA	112458746	112437107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112458670
Isoform_178512_112	chr8	-	3194	7	FSM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	-54	2	-54	1	multi-exon	FALSE	canonical	3	36	junction_6	42.5597619040959	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCCTACAGAAATGCT	NA	False	NA	-4	True	AATAAA	-15	NA	112470495	112437107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112470320
Isoform_178525_1305	chr8	-	1213	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-35	0	-35	0	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580958	112495122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
Isoform_178526_26	chr8	-	3030	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-36	-1816	-36	1816	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACAGAATTGTTTTCTGT	NA	False	NA	NA	False	AATAAA	-24	NA	112580959	112493306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
Isoform_178527_457	chr8	-	1235	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-57	0	-57	0	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580980	112495122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
Isoform_178539_29	chr8	-	3845	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	31	2	31	-2	multi-exon	FALSE	canonical	3	19	junction_1	7	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTGCGTTGGGAACC	NA	False	NA	-7	True	AATAAA	-12	NA	112603351	112589671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112593129_112596219_112596391_112603134
Isoform_17854_111	chr11	-	799	5	FSM	ENSMUSG00000020736.13	ENSMUST00000021082.7	858	5	39	20	-8	-20	multi-exon	FALSE	canonical	3	183	junction_4	11.1214882097676	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACCAAACGCGA	NA	False	NA	-28	True	AATACA	-28	NA	115382649	115381265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115381571_115381678_115381794_115381963_115382025_115382096_115382198_115382432
Isoform_178544_13	chr8	-	3810	3	NNC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTGCGTTGGGAACC	NA	False	NA	-7	True	AATAAA	-12	NA	112603385	112589671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_112593129_112596288_112596391_112603134
Isoform_178546_551	chr8	-	2892	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	86	6	4	-6	multi-exon	FALSE	canonical	3	251	junction_1	6.79256129077161	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACGTTTCCCTTGGCT	NA	False	NA	-10	True	ATTAAA	-9	NA	112660427	112638648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
Isoform_17855_17	chr11	-	1098	3	FSM	ENSMUSG00000020736.13	ENSMUST00000124778.8	907	3	27	-218	-9	0	multi-exon	FALSE	canonical	3	183	junction_2	15.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	False	NA	-8	True	AATAAA	-19	NA	115382650	115381245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115382025_115382096_115382198_115382432
Isoform_178555_13	chr8	-	3269	6	NIC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	6	-6	intron_retention	FALSE	canonical	3	257	junction_2	4.66476151587624	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACGTTTCCCTTGGCT	NA	False	NA	-10	True	ATTAAA	-9	NA	112660425	112638648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
Isoform_178558_18	chr8	-	3074	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	32	53	32	-53	multi-exon	FALSE	canonical	3	33	junction_1	12.5521135891752	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGTGTTCTTTTATGAG	NA	False	NA	-63	True	NA	NA	NA	112718902	112693592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
Isoform_178559_18	chr8	-	3136	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	31	-8	31	8	multi-exon	FALSE	canonical	3	33	junction_1	12.5521135891752	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTTAATTACTTATT	NA	False	NA	-2	True	ATTAAA	-13	NA	112718903	112693531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
Isoform_178561_23	chr8	-	2051	9	FSM	ENSMUSG00000031949.18	ENSMUST00000139820.8	2762	9	31	680	31	8	multi-exon	FALSE	canonical	3	40	junction_8	9.81070843517429	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTCTGTCCACCTGTGG	NA	False	NA	NA	False	AATAAA	-30	NA	112718903	112698176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
Isoform_17858_819	chr11	-	1370	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	4	1	4	-1	multi-exon	FALSE	canonical	3	1461	junction_2	125.475844288851	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCGTGTTTTGTCTTTC	NA	False	NA	NA	False	AGTAAA	-18	NA	115405209	115388179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
Isoform_178587_204	chr8	-	2198	16	FSM	ENSMUSG00000031948.15	ENSMUST00000164470.3	2189	16	-10	1	-1	-1	multi-exon	FALSE	canonical	3	76	junction_15	556.875793053432	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	112737908	112720075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112737841
Isoform_178591_440	chr8	-	2201	15	FSM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	-70	0	-13	0	multi-exon	FALSE	canonical	3	198	junction_14	463.92143951408	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737968	112720074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112737841
Isoform_178593_2020	chr8	-	2021	14	FSM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	-13	0	-13	0	multi-exon	FALSE	canonical	3	1149	junction_10	189.523538373557	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737968	112720074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
Isoform_1786_8	chr10	-	2550	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	5	-607	5	607	multi-exon	FALSE	canonical	3	93	junction_2	66.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTTGGGTTATGTGTT	NA	False	NA	NA	False	AGTAAA	-15	NA	29238038	29221564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_29223880_29230287_29230444_29237959
Isoform_178601_6	chr8	+	295	3	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTATGACTAG	NA	False	NA	NA	False	NA	NA	NA	112730016	112737923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_112730073_112732263_112732421_112737841
Isoform_178614_12	chr8	-	7946	7	FSM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	138	-5673	138	5673	multi-exon	FALSE	canonical	3	57	junction_6	26.9670580935745	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCCGTTTGTTTGTG	1907	False	NA	-6	True	AATAAA	-12	NA	117459592	117295465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
Isoform_178618_25	chr8	-	7946	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59819	5677	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTTTGTTTGTGTCCC	NA	False	NA	-2	True	AATAAA	-16	NA	117399911	117295461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
Isoform_178620_4	chr8	-	662	4	FSM	ENSMUSG00000014633.16	ENSMUST00000131616.8	876	4	-25	239	0	0	multi-exon	FALSE	canonical	2	3	junction_2	157.584545209512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648186	117616256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117616599_117620826_117620899_117637822_117637974_117648089
Isoform_178621_163	chr8	-	606	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	20	833	4	0	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648174	117616256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
Isoform_178622_15	chr8	-	851	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	17	591	1	3	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	117648177	117616014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
Isoform_178624_6	chr8	-	481	3	FSM	ENSMUSG00000014633.16	ENSMUST00000134356.2	413	3	27	-95	3	-2	multi-exon	FALSE	canonical	3	21	junction_2	154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGCCTCCCTTTCTTTA	NA	False	NA	-7	True	AATAAA	-13	NA	117648158	117616258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117616599_117620826_117620899_117648089
Isoform_178625_6	chr8	-	534	3	FSM	ENSMUSG00000014633.16	ENSMUST00000078589.7	523	3	4	-15	4	0	multi-exon	FALSE	canonical	3	30	junction_1	157.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648174	117616256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117616599_117637866_117637974_117648089
Isoform_178626_6	chr8	-	2981	3	FSM	ENSMUSG00000031847.9	ENSMUST00000213068.2	1482	3	7	-1506	7	-8	multi-exon	FALSE	canonical	1	4	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAATTGGCTCTCTCA	8532	False	NA	NA	False	AATAAA	-20	NA	117705691	117696340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117698896_117700190_117700439_117705513
Isoform_178627_4	chr8	-	2489	3	FSM	ENSMUSG00000031847.9	ENSMUST00000070577.7	2976	3	-28	515	-12	-515	multi-exon	FALSE	canonical	2	7	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAGTTTGAATTGCTTA	8513	False	NA	NA	False	ATTAAA	-13	NA	117705710	117696847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117698896_117700190_117700439_117705517
Isoform_178628_10	chr8	-	2966	3	FSM	ENSMUSG00000031847.9	ENSMUST00000070577.7	2976	3	2	8	2	-8	multi-exon	FALSE	canonical	2	7	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAATTGGCTCTCTCA	8543	False	NA	NA	False	AATAAA	-20	NA	117705680	117696340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117698896_117700190_117700439_117705517
Isoform_17863_78	chr11	-	3735	4	FSM	ENSMUSG00000020737.13	ENSMUST00000155399.2	696	4	-12	-3027	4	-2	multi-exon	FALSE	canonical	3	1461	junction_1	143.613679323694	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCGTGTTTTGTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	115405209	115388180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115391511_115392830_115392929_115393857_115394001_115405045
Isoform_178632_1781	chr8	-	1215	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	65	163	65	-163	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATTGTGATTTTTATT	NA	False	NA	-10	True	AATAAA	-15	NA	117720211	117708711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
Isoform_178634_113	chr8	-	1263	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	21	159	21	-159	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGATTTTTATTTGGA	NA	False	NA	-6	True	AATAAA	-19	NA	117720255	117708707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
Isoform_178635_44	chr8	-	1140	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	61	-162	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	974.020647739165	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720215	117708710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_117709466_117710546_117710679_117714051_117714116_117720026
Isoform_178637_5	chr8	-	1798	9	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	65395	-203	7041	203	3prime_fragment	FALSE	canonical	3	6	junction_4	8.3132048573339	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAACATTCTCTACG	4464	False	NA	NA	False	AATAAA	-3	NA	117743793	117722214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_117722580_117724274_117724407_117724814_117724917_117726511_117726723_117736308_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556
Isoform_178638_7	chr8	-	2994	14	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53608	-221	2	221	3prime_fragment	FALSE	canonical	3	6	junction_4	7.94731170356426	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAACAATTAATTCATTGC	NA	False	NA	NA	False	AATAAA	-21	NA	117755580	117722196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_117722580_117724274_117724407_117724814_117724917_117726511_117726723_117736308_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
Isoform_178639_6	chr8	-	1241	5	ISM	ENSMUSG00000034416.19	ENSMUST00000162080.2	1716	8	7041	-6	7041	6	3prime_fragment	FALSE	canonical	3	20	junction_4	5.53962995154008	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTCTTATTTATTTAT	4464	False	NA	NA	False	TATAAA	-25	NA	117743793	117736055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556
Isoform_178641_7	chr8	-	2412	10	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53610	13643	4	1	internal_fragment	FALSE	canonical	3	6	junction_9	8.83735058895475	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCATGTTCTTATTTA	NA	False	NA	NA	False	TATAAA	-20	NA	117755578	117736060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
Isoform_178642_4	chr8	-	2266	9	NIC	ENSMUSG00000034416.19	novel	7389	43	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	10.3198837202751	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCATGTTCTTATTTA	NA	False	NA	NA	False	TATAAA	-20	NA	117755570	117736060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117747778_117747873_117748556_117748762_117750601_117750831_117755017
Isoform_178644_5	chr8	-	1165	4	NIC	ENSMUSG00000034416.19	novel	1716	8	NA	NA	6979	-4	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	9.84321537348893	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTGGCATGTTCTT	4402	False	NA	NA	False	TATAAA	-15	NA	117743855	117736065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_117736470_117740602_117740737_117741601_117741930_117743556
Isoform_178645_5	chr8	-	1999	5	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53600	22964	-6	4907	internal_fragment	FALSE	canonical	3	6	junction_4	1.92028643696715	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCATGAGCACAGGATC	NA	False	NA	NA	False	NA	NA	NA	117755588	117745381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
Isoform_178646_612	chr8	-	1067	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	4	-3	4	3	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTAATTTTAGTCT	NA	False	NA	-9	True	AATAAA	-25	NA	118528678	118518380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
Isoform_178649_9	chr8	-	3378	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	0	-2310	0	2310	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGGATTGTCTCCTTAA	NA	False	NA	NA	False	NA	NA	NA	118528682	118516073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
Isoform_178650_14	chr8	-	2873	4	NIC	ENSMUSG00000031843.3	novel	1068	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	669	junction_1	54.7986212316413	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGAAGTAATTTTAGT	NA	False	NA	-11	True	AATAAA	-23	NA	118528682	118518382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_118519058_118519417_118521411_118525782_118525896_118528590
Isoform_178690_21	chr8	-	4360	24	FSM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	-23	-1	-15	1	multi-exon	FALSE	canonical	3	10	junction_23	140.895341173728	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8126	False	NA	-6	True	AATAAA	-15	NA	120285489	120234893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276446_120285384
Isoform_178693_49	chr8	-	4306	24	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_23	138.535194084391	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8131	False	NA	-6	True	AATAAA	-15	NA	120285484	120234893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276397_120285384
Isoform_178694_120	chr8	-	4164	23	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_22	108.399513584954	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8429	False	NA	-6	True	AATAAA	-15	NA	120285186	120234893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285128
Isoform_178695_864	chr8	-	4206	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	-10	-1	-10	1	multi-exon	FALSE	canonical	3	394	junction_22	51.0282088571954	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8131	False	NA	-6	True	AATAAA	-15	NA	120285484	120234893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
Isoform_178697_24	chr8	-	4308	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	-112	-1	-112	1	multi-exon	FALSE	canonical	3	394	junction_22	51.0282088571954	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8029	False	NA	-6	True	AATAAA	-15	NA	120285586	120234893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
Isoform_17870_1291	chr11	-	1021	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	24	6	-23	-6	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCTGTTCTCTTTAT	NA	False	NA	-57	True	AATAAA	-12	NA	115427078	115413933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
Isoform_178704_38	chr8	-	3101	5	NIC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	2	11	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	55.8496866598193	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGGTCTTTTTCTTTC	NA	False	NA	1	True	AATAAA	-30	NA	120301912	120288716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294690_120301830
Isoform_178706_210	chr8	-	3142	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	10	-11	2	11	multi-exon	TRUE	canonical	3	107	junction_4	18.9274932307477	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGGTCTTTTTCTTTC	NA	False	NA	1	True	AATAAA	-30	NA	120301912	120288716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
Isoform_178715_130	chr8	-	3221	15	FSM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	16	-1	0	1	multi-exon	FALSE	canonical	1	17	junction_9	12.1866856085832	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTAAAGCCCACT	1080	False	NA	-1	True	NA	NA	NA	120331945	120324712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
Isoform_178717_5	chr8	-	3326	14	NIC	ENSMUSG00000031832.16	novel	3236	15	NA	NA	-16	-3	intron_retention	FALSE	canonical	1	17	junction_8	12.3996564182215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTGTGTAAAGCC	1048	False	NA	-5	True	AATAAA	-45	NA	120331977	120324716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
Isoform_178719_7	chr8	-	2878	2	ISM	ENSMUSG00000045246.12	ENSMUST00000061828.10	3806	3	2483	0	2149	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCAGGCTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	120359936	120350592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_120353159_120359624
Isoform_178721_4	chr8	-	3094	2	ISM	ENSMUSG00000045246.12	ENSMUST00000061828.10	3806	3	2267	0	1933	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCAGGCTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	120360152	120350592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_120353159_120359624
Isoform_178723_4	chr8	-	3198	8	NIC	ENSMUSG00000034105.10	novel	3085	8	NA	NA	23	-56	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	11.4855721384239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCAAGTGTCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	120505110	120486870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120504884
Isoform_178724_15	chr8	-	3138	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	-11	-42	-11	42	multi-exon	TRUE	canonical	3	25	junction_5	4.74664220738176	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCATGGCTCCTATTCTT	NA	False	NA	NA	False	NA	NA	NA	120505166	120486772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
Isoform_178725_35	chr8	-	3022	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	9	54	9	-54	multi-exon	FALSE	canonical	3	25	junction_5	4.74664220738176	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAAGTGTCTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	120505146	120486868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
Isoform_178726_35	chr8	-	3006	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	20	59	0	-59	multi-exon	FALSE	canonical	3	25	junction_5	4.74664220738176	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGGCAAGTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	120505135	120486873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
Isoform_178727_18	chr8	-	3059	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	30	-4	8	4	multi-exon	FALSE	canonical	3	25	junction_5	4.74664220738176	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTAGCAGGCTTGGTGTG	NA	False	NA	NA	False	AATAAA	-24	NA	120505125	120486810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
Isoform_178728_224	chr8	-	1629	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	-32	-1	-32	1	multi-exon	FALSE	canonical	3	203	junction_1	12.9185482500507	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGTTGGGTTGTCTG	NA	False	NA	NA	False	AGTAAA	-15	NA	120567315	120535959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
Isoform_178729_255	chr8	-	1593	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	4	-1	4	1	multi-exon	FALSE	canonical	3	203	junction_1	12.9185482500507	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGTTGGGTTGTCTG	NA	False	NA	NA	False	AGTAAA	-15	NA	120567279	120535959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
Isoform_17873_206	chr11	-	1043	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	2	6	2	-6	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCTGTTCTCTTTAT	NA	False	NA	-57	True	AATAAA	-12	NA	115427100	115413933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
Isoform_178731_8	chr8	-	1435	3	NIC	ENSMUSG00000031827.14	novel	1596	4	NA	NA	4	1	intron_retention	FALSE	canonical	1	6	junction_1	109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGTTGGGTTGTCTG	NA	False	NA	NA	False	AGTAAA	-15	NA	120567279	120535959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_120537095_120566880_120566964_120567062
Isoform_178733_17	chr8	-	2946	8	NIC	ENSMUSG00000031823.15	novel	3069	8	NA	NA	156	-205	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	30.1465806772611	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCCTGCAGCCCTC	NA	False	NA	-6	True	AATAAA	-18	NA	120828065	120807833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827592
Isoform_178735_43	chr8	-	2884	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	-19	204	-19	-204	multi-exon	FALSE	canonical	3	71	junction_3	9.07114735222145	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCTCCTGCAGCCCTCT	NA	False	NA	-5	True	AATAAA	-19	NA	120828240	120807832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
Isoform_178736_267	chr8	-	2706	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	158	205	158	-205	multi-exon	FALSE	canonical	3	71	junction_3	9.07114735222145	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCCTGCAGCCCTC	NA	False	NA	-6	True	AATAAA	-18	NA	120828063	120807833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
Isoform_178745_581	chr8	-	1055	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	206	2639	-64	272	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTACACTTAGAACGG	NA	False	NA	83	True	AATACA	-10	NA	121315837	121308010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
Isoform_178746_650	chr8	-	1013	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	248	2639	-22	272	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTACACTTAGAACGG	NA	False	NA	83	True	AATACA	-10	NA	121315795	121308010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
Isoform_178757_28	chr8	-	751	4	FSM	ENSMUSG00000043687.17	ENSMUST00000123927.9	844	4	93	0	-36	0	multi-exon	FALSE	canonical	3	48	junction_3	5.09901951359278	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCGGGTCCTGGTTTTTG	NA	False	NA	-1	True	AATAAA	-13	NA	121361138	121335340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_121335770_121337932_121338077_121355210_121355257_121361006
Isoform_178761_20	chr8	-	1143	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	24	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	592.891355983539	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTACACGGTGTACCT	NA	False	NA	-21	True	ATTAAA	-30	NA	121394802	121384570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121387232_121387410_121387522_121387600_121394495
Isoform_178762_43	chr8	-	4879	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	58	5	24	-5	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTACCTCCTCTCTGTGT	NA	False	NA	-5	True	AATAAA	-18	NA	121394802	121380657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
Isoform_178763_32	chr8	-	4081	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	36	825	2	-825	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCATGTATTCCAGGAG	NA	False	NA	-2	True	AATAAA	-29	NA	121394824	121381477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
Isoform_178764_1335	chr8	-	967	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	50	3925	16	-6	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGAGAAGTGTACACGG	NA	False	NA	-28	True	ATTAAA	-23	NA	121394810	121384577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
Isoform_178766_21	chr8	-	1082	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	-58	3918	-58	1	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTACACGGTGTACCT	NA	False	NA	-21	True	ATTAAA	-30	NA	121394918	121384570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
Isoform_178770_7	chr8	-	1348	10	FSM	ENSMUSG00000031816.16	ENSMUST00000133037.8	1060	10	0	-288	0	-6	multi-exon	FALSE	canonical	3	29	junction_2	18.6494629717802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTAAGCTGCTTGTATG	NA	False	NA	-17	True	NA	NA	NA	121835131	121824301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
Isoform_178771_11	chr8	-	1297	10	FSM	ENSMUSG00000031816.16	ENSMUST00000133037.8	1060	10	53	-290	4	-4	multi-exon	FALSE	canonical	3	29	junction_2	18.6494629717802	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAAGCTGCTTGTATGTT	NA	False	NA	-15	True	NA	NA	NA	121835078	121824299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
Isoform_178772_11	chr8	-	1561	9	NIC	ENSMUSG00000031816.16	novel	1366	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	48	junction_6	14.260412862186	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTGTATGTTTGTG	NA	False	NA	-11	True	NA	NA	NA	121835111	121824295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
Isoform_178774_10	chr8	-	1928	8	NIC	ENSMUSG00000031816.16	novel	1060	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	48	junction_5	13.1413042560859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGCAGGACTCAGCC	NA	False	NA	NA	False	ATTAAA	-23	NA	121835076	121824675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
Isoform_178775_3	chr8	-	2312	8	NIC	ENSMUSG00000031816.16	novel	1060	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	48	junction_5	13.1413042560859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTGTATGTTTGTGT	NA	False	NA	-10	True	NA	NA	NA	121835079	121824294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
Isoform_178776_3	chr8	-	1926	8	ISM	ENSMUSG00000031816.16	ENSMUST00000116415.9	1520	9	-10	386	6	-2	5prime_fragment	FALSE	canonical	2	11	junction_5	27.5473618130147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCCTTGCAGGACTCAG	NA	False	NA	NA	False	ATTAAA	-21	NA	121835076	121824677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
Isoform_178777_5	chr8	-	2409	8	NIC	ENSMUSG00000031816.16	novel	2415	8	NA	NA	2	-5	intron_retention	FALSE	canonical	3	11	junction_5	24.5581359393649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTGCTTGTATGT	NA	False	NA	-16	True	NA	NA	NA	121835129	121824300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831298_121832312_121832427_121833608_121833713_121835026
Isoform_178779_4	chr8	-	791	5	NIC	ENSMUSG00000031816.16	novel	358	4	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	34.8595395838786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGTCTGCGGCTTAC	NA	False	NA	NA	False	AATAAA	-25	NA	121835108	121830595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_121830920_121831130_121831298_121832312_121832427_121833608_121833713_121835026
Isoform_17878_9	chr16	-	549	1	FSM	ENSMUSG00000084838.4	ENSMUST00000117664.2	286	1	-86	-177	-86	177	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCATAGTGCTCTCTCTT	NA	False	NA	NA	False	CATAAA	-19	NA	19995848	19995299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_19995300_19995800
Isoform_178780_484	chr8	-	1785	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	37	2536	21	2023	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGATGCCTGCTGGTTTT	NA	False	NA	20	True	NA	NA	NA	122305508	122278714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
Isoform_178781_30	chr8	-	4318	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	37	3	21	-3	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGACTTGTTTCTCGG	NA	False	NA	NA	False	AGTAAA	-18	NA	122305508	122276181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
Isoform_178782_33	chr8	-	1837	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	-49	2570	-49	1989	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGACCGGTGCCTGT	NA	False	NA	-14	True	AATAAA	-21	NA	122305594	122278748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
Isoform_178784_18	chr8	-	1683	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	13	1985	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	107.929493236113	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGCTGAATGACCGGTGC	NA	False	NA	-18	True	AATAAA	-17	NA	122305516	122278752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122305196
Isoform_178786_7	chr8	-	2633	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	21	1989	intron_retention	FALSE	canonical	3	287	junction_2	21.48373851098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGACCGGTGCCTGT	NA	False	NA	-14	True	AATAAA	-21	NA	122305508	122278748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_122279185_122280843_122281191_122281944_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
Isoform_178789_17	chr8	-	7441	13	FSM	ENSMUSG00000061410.7	ENSMUST00000046386.5	7444	13	1	2	1	-2	multi-exon	FALSE	canonical	3	23	junction_1	7.00545422430901	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTCACCATTCTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	122379639	122325443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_122329071_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
Isoform_178792_268	chr8	-	2053	12	FSM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	7	18	7	2	multi-exon	FALSE	canonical	3	124	junction_5	29.2453287927892	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTCTTTCTTCTACAG	443	False	NA	-23	True	AATAAA	-19	NA	122556301	122523069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
Isoform_178810_7456	chr8	-	3506	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	10	1	10	-1	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	7456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGACTGTGTTCTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	122634423	122607889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
Isoform_178837_18	chr8	-	787	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20951	1	3521	-1	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGAGAGACCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	122650692	122642865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
Isoform_178838_14	chr8	-	1450	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20987	-698	3557	698	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAACAAAAGCAAGC	NA	False	NA	NA	False	AATAAA	-4	NA	122650656	122642166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
Isoform_178840_519	chr8	-	725	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	22	-3	0	3	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAAATTCTCCATATG	NA	False	NA	NA	False	AATAAA	-21	NA	123159647	123151511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
Isoform_178841_98	chr8	-	751	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	-6	-1	-6	1	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACAAGAAATTCTCCATA	NA	False	NA	NA	False	AATAAA	-19	NA	123159675	123151513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
Isoform_178846_464	chr8	-	1729	10	FSM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	27	0	1	0	multi-exon	FALSE	canonical	3	183	junction_4	22.2211110833319	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170134	123160339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
Isoform_178848_7	chr8	-	1632	9	NIC	ENSMUSG00000006517.6	novel	1756	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	73.6324274691525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170153	123160339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_123160915_123161542_123161652_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
Isoform_178851_192	chr8	-	1788	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	-8	3	-8	-3	multi-exon	TRUE	canonical	3	110	junction_3	7.81280999384984	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGCGAGCCTTGGTCCT	9973	False	NA	-8	True	AATAAA	-14	NA	123202811	123192888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
Isoform_178867_6	chr8	-	8189	51	FSM	ENSMUSG00000014444.18	ENSMUST00000067252.14	8216	51	5	22	5	1	multi-exon	FALSE	canonical	3	19	junction_46	26.2908729410037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACGGACTGTCACAGACC	6116	False	NA	-20	True	AGTAAA	-16	NA	123278063	123208458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229048_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
Isoform_178868_38	chr8	-	8191	51	FSM	ENSMUSG00000014444.18	ENSMUST00000156333.9	8219	51	7	21	7	2	multi-exon	FALSE	canonical	3	43	junction_46	25.1307699842245	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	6118	False	NA	-19	True	AGTAAA	-17	NA	123278061	123208457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
Isoform_178874_21	chr8	-	937	6	NIC	ENSMUSG00000006589.9	novel	660	6	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	634.519030447472	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	123303603	123301374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123302971_123303253_123303361_123303491
Isoform_178876_31	chr8	-	1251	5	FSM	ENSMUSG00000006589.9	ENSMUST00000213029.2	929	5	-42	-280	-5	-1	multi-exon	FALSE	canonical	3	286	junction_3	493.303152229945	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	123303634	123301374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123303361_123303491
Isoform_178878_41	chr8	-	771	4	ISM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	210	-1	-9	-1	3prime_fragment	FALSE	canonical	0	0	junction_3	665.62518648928	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	123303419	123301374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253
Isoform_178881_909	chr8	-	868	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	-18	-1	1	-1	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	123303647	123301374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
Isoform_178886_67	chr8	-	2501	14	FSM	ENSMUSG00000015027.12	ENSMUST00000015171.11	2557	14	59	-3	0	3	multi-exon	FALSE	canonical	3	11	junction_10	4.2966892442366	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGTCTTTTGTTTGT	NA	False	NA	-1	True	NA	NA	NA	123338143	123304977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
Isoform_17890_70	chr11	-	3590	17	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	93	junction_13	83.8961178705546	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
Isoform_17893_640	chr11	-	3649	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	167	0	0	0	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
Isoform_178945_34	chr8	-	9279	14	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	25	495	intron_retention	FALSE	canonical	3	57	junction_10	113.267448072689	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCACTGTCCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	123768991	123610065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
Isoform_178946_14	chr8	-	9318	14	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	-20	489	intron_retention	FALSE	canonical	3	57	junction_10	113.267448072689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTACATGGCACTGTCC	NA	False	NA	NA	False	NA	NA	NA	123769036	123610071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
Isoform_178947_26	chr8	-	9228	13	FSM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-277	-496	-20	496	multi-exon	TRUE	canonical	3	162	junction_12	93.1657349386923	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCACTGTCCCTTCAGG	NA	False	NA	NA	False	NA	NA	NA	123769036	123610064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
Isoform_178948_80	chr8	-	9180	13	FSM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-230	-495	27	495	multi-exon	FALSE	canonical	3	162	junction_12	93.1657349386923	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCACTGTCCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	123768989	123610065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
Isoform_178949_31	chr8	-	2802	9	NNC	ENSMUSG00000035569.18	novel	2934	3	NA	NA	25	2	at_least_one_novel_splicesite	FALSE	non_canonical	2	16	junction_1	87.7040477971228	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGGTCTTTGTTTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	123768991	123623756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_123624649_123624669_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
Isoform_178950_53	chr8	-	2752	7	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-258	13196	-1	2	5prime_fragment	FALSE	canonical	3	162	junction_6	36.6409000374657	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGGTCTTTGTTTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	123769017	123623756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
Isoform_178951_15	chr8	-	2749	8	NNC	ENSMUSG00000035569.18	novel	2934	3	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	16	junction_1	76.7255910797083	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTGGTCTTTGTTTTC	NA	False	NA	-4	True	AATAAA	-15	NA	123769036	123623757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_123624649_123624669_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
Isoform_178952_6	chr8	-	5924	4	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-291	19633	-34	2608	5prime_fragment	FALSE	canonical	3	162	junction_3	28.1937739383873	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123769050	123630193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_123635546_123642639_123642785_123701467_123701532_123768687
Isoform_178953_24	chr8	-	5865	4	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-232	19633	25	2608	5prime_fragment	FALSE	canonical	3	162	junction_3	28.1937739383873	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123768991	123630193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_123635546_123642639_123642785_123701467_123701532_123768687
Isoform_178954_5	chr8	-	1008	3	FSM	ENSMUSG00000035569.18	ENSMUST00000212937.2	943	3	-72	7	-72	-7	multi-exon	FALSE	canonical	3	21	junction_1	70.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGGATTTGAAAAGTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	123769088	123658254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123658798_123701467_123701532_123768687
Isoform_178955_5	chr8	-	917	3	FSM	ENSMUSG00000035569.18	ENSMUST00000212937.2	943	3	25	1	25	-1	multi-exon	FALSE	canonical	3	21	junction_1	70.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAAAGTAAATTGTTC	NA	False	NA	NA	False	AATAAA	-23	NA	123768991	123658248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123658798_123701467_123701532_123768687
Isoform_178957_21	chr8	-	1159	7	FSM	ENSMUSG00000000739.15	ENSMUST00000000755.15	3805	7	-10	2656	-6	1	multi-exon	FALSE	canonical	3	57	junction_6	18.7764628073435	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGACTCTGTCCCAGGC	9733	False	NA	-6	True	AATAAA	-17	NA	123885019	123869586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884327_123884926
Isoform_178958_27	chr8	-	1174	7	NIC	ENSMUSG00000000739.15	novel	3805	7	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	23.3380947522857	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGACTCTGTCCCAGGC	9733	False	NA	-6	True	AATAAA	-17	NA	123885019	123869586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884342_123884926
Isoform_178960_3	chr8	-	3156	2	FSM	ENSMUSG00000000739.15	ENSMUST00000126951.2	674	2	-6	-2476	-6	2476	multi-exon	FALSE	canonical	3	57	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	9733	False	NA	NA	False	AATACA	-21	NA	123885019	123881263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123884327_123884926
Isoform_178961_3	chr8	-	3175	2	FSM	ENSMUSG00000000739.15	ENSMUST00000152722.2	460	2	31	-2746	-10	2476	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	9729	False	NA	NA	False	AATACA	-21	NA	123885023	123881263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123884342_123884926
Isoform_178965_1389	chr8	-	2138	7	FSM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	1	1	1	-1	multi-exon	FALSE	canonical	3	428	junction_1	74.3544439380279	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTCAGACTTTTTTTTT	9746	False	NA	-5	True	AATAAA	-15	NA	123939498	123931003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123936954_123936975_123939404
Isoform_178967_26	chr8	-	3239	6	NIC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	14	-4	intron_retention	FALSE	canonical	3	428	junction_1	71.2673838442243	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTCTCAGACTTTTTT	9759	False	NA	-8	True	AATAAA	-12	NA	123939485	123931006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123936975_123939404
Isoform_178968_7	chr8	-	2679	2	FSM	ENSMUSG00000033594.12	ENSMUST00000166768.3	2707	2	22	6	-2	-3	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTTCTGGAAAGGCTT	NA	False	NA	NA	False	ATTAAA	-11	NA	123962950	123958999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123960985_123962256
Isoform_178969_5	chr8	-	2387	3	FSM	ENSMUSG00000033594.12	ENSMUST00000098327.2	2380	3	-4	-3	-4	0	multi-exon	FALSE	canonical	1	2	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGAAAGGCTTTTTATC	NA	False	NA	NA	False	ATTAAA	-17	NA	123962952	123958993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123960985_123962256_123962589_123962888
Isoform_178970_18	chr8	-	2784	15	FSM	ENSMUSG00000001062.19	ENSMUST00000122363.8	2952	15	167	1	-5	-1	multi-exon	FALSE	canonical	1	6	junction_9	6.2274081482506	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCATGTGACTTGTTCGT	2216	False	NA	NA	False	AATAAA	-17	NA	123980920	123969095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
Isoform_178972_9	chr8	-	2773	15	NNC	ENSMUSG00000001062.19	novel	2952	15	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	7.05698380387565	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCATGTGACTTGTTCGT	2224	False	NA	NA	False	AATAAA	-17	NA	123980912	123969095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977756_123979343_123979420_123980726
Isoform_178978_216	chr8	-	4466	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	18	1	2	0	multi-exon	FALSE	canonical	3	94	junction_17	20.5305065860605	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTCTGGCCTTATTG	NA	False	NA	-5	True	AAGAAA	-16	NA	124045297	123995039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
Isoform_178979_18	chr8	-	4555	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	29	-99	13	99	multi-exon	FALSE	canonical	3	94	junction_17	20.5305065860605	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATATGGCTGCTGGCTC	NA	False	NA	95	True	NA	NA	NA	124045286	123994939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
Isoform_178980_8	chr8	-	6452	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	30	-1997	14	1997	multi-exon	TRUE	canonical	3	94	junction_17	20.5305065860605	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAAAAGATTTTGGTCA	NA	False	NA	-9	True	AATAAA	-14	NA	124045285	123993041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
Isoform_178981_5	chr8	-	4574	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	15	-2	intron_retention	FALSE	canonical	3	94	junction_17	20.7630179629934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGGCCTTAT	NA	False	NA	-7	True	AAGAAA	-14	NA	124045284	123995041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124040113_124043101_124043196_124044800_124044911_124045213
Isoform_178982_15	chr8	-	4359	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	2	15	junction_38	27.438124646495	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045287	123995040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039978_124040113_124043101_124043196_124044800_124044911_124045213
Isoform_178983_3	chr8	-	3476	27	ISM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	15	17285	-1	604	5prime_fragment	FALSE	canonical	3	94	junction_1	14.5726094693285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	124045300	124012323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
Isoform_178984_163	chr8	-	2368	3	FSM	ENSMUSG00000031971.16	ENSMUST00000034452.12	2390	3	20	2	20	-2	multi-exon	FALSE	canonical	3	74	junction_2	2	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGCCTTGCTAGTGAT	NA	False	NA	NA	False	ATTAAA	-24	NA	124586249	124567571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_124569258_124571918_124572185_124585833
Isoform_178985_52	chr8	-	3155	3	FSM	ENSMUSG00000085030.2_ENSMUSG00000031971.16	ENSMUST00000034452.12	2390	3	20	-785	20	785	multi-exon	FALSE	canonical	3	74	junction_2	2	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTTTTCTGTAAGCGT	NA	False	NA	NA	False	TTTAAA	-25	NA	124586249	124566784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_124569258_124571918_124572185_124585833
Isoform_178986_12	chr8	-	3212	3	FSM	ENSMUSG00000085030.2_ENSMUSG00000031971.16	ENSMUST00000034452.12	2390	3	32	-854	32	854	multi-exon	FALSE	canonical	3	74	junction_2	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATGCCCAGCTTGGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	124586237	124566715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_124569258_124571918_124572185_124585833
Isoform_179001_743	chr8	-	3617	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	8	2183	-2	-2183	multi-exon	TRUE	canonical	3	328	junction_14	43.1434815470425	743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTAGGTCTGGATC	NA	False	NA	-23	True	ATTAAA	-17	NA	124675996	124626044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
Isoform_179011_123	chr8	-	4056	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	248	2	248	-2	multi-exon	FALSE	canonical	3	39	junction_3	9.48536885008813	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGTGTGTTAT	7125	False	NA	-2	True	ATTAAA	-16	NA	124709613	124679199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
Isoform_179015_13	chr8	-	4089	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	216	1	216	-1	multi-exon	TRUE	canonical	3	39	junction_3	9.48536885008813	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTCTGTGTGTTATG	7093	False	NA	-1	True	ATTAAA	-17	NA	124709645	124679198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
Isoform_179019_8	chr8	-	4222	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	81	3	81	-3	multi-exon	FALSE	canonical	3	39	junction_3	9.48536885008813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGTGTGTTA	6958	False	NA	-3	True	ATTAAA	-15	NA	124709780	124679200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
Isoform_179030_2383	chr8	-	2960	5	FSM	ENSMUSG00000038697.16	ENSMUST00000093039.6	2912	5	-47	-1	-47	1	multi-exon	FALSE	canonical	3	323	junction_4	121.207208944023	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGTGGCATCTT	4047	False	NA	37	True	ATTAAA	-16	NA	124747794	124723055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599
Isoform_179033_1025	chr8	-	2992	5	FSM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	-18	-1	-18	1	multi-exon	FALSE	canonical	3	200	junction_4	173.639713199487	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGTGGCATCTT	3687	False	NA	37	True	ATTAAA	-16	NA	124748154	124723055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747927
Isoform_179042_40	chr8	-	2390	4	ISM	ENSMUSG00000050751.15	ENSMUST00000136892.3	1739	7	16659	-974	-1011	0	3prime_fragment	FALSE	canonical	3	93	junction_3	5.71547606649408	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGTATGTGATTTTG	NA	False	NA	-2	True	AATAAA	-25	NA	125103296	125095787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848
Isoform_179047_184	chr8	-	3366	7	FSM	ENSMUSG00000050751.15	ENSMUST00000140012.8	3222	7	-141	-3	-141	-1	multi-exon	FALSE	canonical	3	72	junction_6	10.4083299973307	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTAGTATGTGATTTT	NA	False	NA	-3	True	AATAAA	-24	NA	125161218	125095788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125160537
Isoform_179050_18	chr8	-	2744	7	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	18813	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	33.3066559914581	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGGCTGTTAGTATGTGA	NA	False	NA	-7	True	AATAAA	-20	NA	125141862	125095792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125141799
Isoform_179051_7	chr8	-	2944	7	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-10499	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	34.7690794944141	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTAGTATGTGATTTT	NA	False	NA	-3	True	AATAAA	-24	NA	125130454	125095788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125130195
Isoform_179052_16	chr8	-	2263	5	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-979	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	40.5732362524855	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGTATGTGATTTTG	NA	False	NA	-2	True	AATAAA	-25	NA	125103264	125095787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125103124
Isoform_179054_16	chr8	-	2172	5	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-1052	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	42.292877650971	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGGCTGTTAGTATGTGA	NA	False	NA	-7	True	AATAAA	-20	NA	125103337	125095792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125103283
Isoform_179055_246	chr8	-	3152	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	145	10	145	-10	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGAGTCAGATCTG	NA	False	NA	-13	True	AATAAA	-9	NA	125389963	125362504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
Isoform_179056_377	chr8	-	3124	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	174	9	174	-9	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGAGTCAGATCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	125389934	125362503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
Isoform_179057_30	chr8	-	3349	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	-52	10	-52	-10	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGAGTCAGATCTG	NA	False	NA	-13	True	AATAAA	-9	NA	125390160	125362504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
Isoform_17906_7	chr11	-	1382	7	FSM	ENSMUSG00000020743.16	ENSMUST00000146244.8	869	7	-21	-492	0	-7	multi-exon	FALSE	canonical	1	4	junction_4	162.572035315631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503746	115498750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115501242_115501309_115502728_115502861_115503610
Isoform_179064_41	chr8	-	3300	23	FSM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	7	-6	1	5	multi-exon	FALSE	canonical	3	107	junction_6	114.790718661872	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448710	125398065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179066_65	chr8	-	3149	21	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	107	junction_6	93.2745410066434	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	-4	True	ATTAAA	-20	NA	125448719	125398066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179068_49	chr8	-	2906	19	FSM	ENSMUSG00000037300.20	ENSMUST00000231984.2	2905	19	-3	2	1	-1	multi-exon	FALSE	canonical	3	107	junction_6	106.569342173807	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGTCAGTTTGGTCG	NA	False	NA	-10	True	ATTAAA	-14	NA	125448710	125398072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_17907_12	chr11	-	1687	5	FSM	ENSMUSG00000020743.16	ENSMUST00000106507.9	1656	5	-38	7	-38	-7	multi-exon	FALSE	canonical	3	302	junction_2	39.92101576864	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503367	115498750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728
Isoform_179072_183	chr8	-	3303	23	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	143	junction_17	103.32721034023	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448710	125398065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179074_319	chr8	-	3144	21	FSM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	12	-8	1	5	multi-exon	FALSE	canonical	3	213	junction_17	74.4114238541368	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448710	125398065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179078_172	chr8	-	2916	19	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	125	junction_15	88.9418592170619	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448710	125398065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179083_22	chr8	-	3311	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	125.224797863682	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448720	125398065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411372_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179084_30	chr8	-	3151	21	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	134.93756889762	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448720	125398065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401180_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411372_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179085_19	chr8	-	2926	19	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	122.364122172562	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448722	125398065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411372_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179088_18	chr8	-	1997	16	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	-14	8541	-9	-333	5prime_fragment	FALSE	canonical	3	143	junction_10	122.703146749471	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATATAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	125448731	125406612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179089_19	chr8	-	1828	14	ISM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	1	8539	-1	-333	5prime_fragment	FALSE	canonical	3	213	junction_10	81.4508963775725	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATATAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	125448721	125406612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_17909_276	chr11	-	1320	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	45	7	3	-7	multi-exon	FALSE	canonical	3	302	junction_2	38.1030182531515	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503750	115498750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
Isoform_179099_10	chr8	-	1380	2	FSM	ENSMUSG00000043068.7	ENSMUST00000055257.7	1338	2	-50	8	-50	-8	multi-exon	FALSE	canonical	2	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCACCCTCTGTGGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	125478621	125467003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125468041_125478278
Isoform_17910_14	chr11	-	2194	4	NIC	ENSMUSG00000020743.16	novel	1656	5	NA	NA	2	-3	intron_retention	FALSE	canonical	3	339	junction_1	27.7168220079832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503744	115498746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728
Isoform_179103_995	chr8	-	1346	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	126	868	20	-868	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTGACTGTTAAGTAGC	NA	False	NA	-9	True	AATACA	-15	NA	125589733	125566094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
Isoform_179107_260	chr8	-	3742	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	126	-1528	20	-15	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAAAACATGT	NA	False	NA	NA	False	AATAAA	-11	NA	125589733	125563698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
Isoform_17911_60	chr11	-	1440	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	2	-7	intron_retention	FALSE	canonical	3	324	junction_4	32.8129166640212	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503744	115498750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503610
Isoform_179121_38	chr8	-	3628	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	-43	9	-43	-9	multi-exon	FALSE	canonical	3	265	junction_4	22.6605383872493	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCATAACTGTTGT	NA	False	NA	-26	True	ATTAAA	-21	NA	125676106	125635334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
Isoform_179122_42	chr8	-	1999	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	-29	1624	-29	-1624	multi-exon	FALSE	canonical	3	265	junction_4	22.6605383872493	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTTGCCAGTGAGT	NA	False	NA	-10	True	ATTAAA	-23	NA	125676092	125636949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
Isoform_179123_164	chr8	-	3578	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	7	9	7	-9	multi-exon	FALSE	canonical	3	265	junction_4	22.6605383872493	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCATAACTGTTGT	NA	False	NA	-26	True	ATTAAA	-21	NA	125676056	125635334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
Isoform_179125_16	chr8	-	2136	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	-166	1624	-166	-1624	multi-exon	FALSE	canonical	3	265	junction_4	22.6605383872493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTTGCCAGTGAGT	NA	False	NA	-10	True	ATTAAA	-23	NA	125676229	125636949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
Isoform_17913_15	chr11	-	2641	3	ISM	ENSMUSG00000020743.16	ENSMUST00000142637.2	621	4	-14	-1256	2	-3	intron_retention	FALSE	canonical	3	382	junction_2	12	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503744	115498746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_115500262_115500364_115500475_115502728
Isoform_179132_6	chr8	-	1842	4	NIC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	-7	-1622	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	128.380510808906	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTTGCCAGTGAGTGA	NA	False	NA	-8	True	ATTAAA	-25	NA	125676070	125636947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_125637503_125638479_125638548_125642399_125642520_125674971
Isoform_17914_32	chr11	-	1897	4	FSM	ENSMUSG00000020743.16	ENSMUST00000142637.2	621	4	-20	-1256	3	-3	multi-exon	FALSE	canonical	3	324	junction_3	34.4222150491349	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503750	115498746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115500262_115500364_115500475_115502728_115502861_115503610
Isoform_179145_4	chr8	-	4922	19	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	87352	1	10306	-1	3prime_fragment	FALSE	canonical	3	176	junction_18	23.0051658181589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAGAAGCAGTGTTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	126209143	126144813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786
Isoform_179156_244	chr8	-	6653	22	FSM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	-68	1	-16	-1	multi-exon	FALSE	canonical	3	164	junction_19	26.9293187551557	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAGAAGCAGTGTTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	126296563	126144813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
Isoform_179157_47	chr8	-	6692	22	FSM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	-106	0	-54	0	multi-exon	TRUE	canonical	3	164	junction_19	26.9293187551557	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126296601	126144812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
Isoform_179159_5	chr8	-	6763	23	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	64.8166517733479	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	126296566	126144814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126233963_126234072_126246584_126246646_126296393
Isoform_179160_6	chr8	-	4517	18	NNC	ENSMUSG00000001995.10	novel	6365	21	NA	NA	13306	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	55.6842308379477	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTGTTGCCTGTCT	NA	False	NA	-2	True	AATAAA	-22	NA	126206143	126144808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206007
Isoform_179161_25	chr8	-	6523	21	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	49.3409312842796	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAGAAGCAGTGTTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	126296565	126144813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
Isoform_179164_22	chr8	-	4252	21	ISM	ENSMUSG00000060212.14	ENSMUST00000047239.13	7236	34	47126	3	-11341	0	3prime_fragment	TRUE	canonical	2	2	junction_9	2.04633819296811	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGCTGTCTGTCTACTG	7770	False	NA	NA	False	ATTAAA	-11	NA	126577930	126478249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_126479052_126480110_126480560_126485850_126486042_126487446_126487722_126488262_126488494_126489543_126489689_126494955_126495078_126498715_126498950_126500540_126500795_126512010_126512227_126515232_126515292_126528199_126528330_126534738_126534848_126542399_126542578_126545407_126545550_126553657_126553809_126554781_126554875_126564675_126564773_126566322_126566433_126577021_126577114_126577758
Isoform_179165_24	chr8	-	6407	30	FSM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	-12	-12	-12	12	multi-exon	FALSE	canonical	3	24	junction_27	8.4550992852775	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATGCTTTTTCTTA	NA	False	NA	-7	True	AATAAA	-33	NA	127201816	127152055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
Isoform_179167_10	chr8	-	7733	30	FSM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	-21	-1329	-21	1329	multi-exon	FALSE	canonical	3	24	junction_27	8.4550992852775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTGTGGCAAATTATT	NA	False	NA	-4	True	ATTAAA	-19	NA	127201825	127150738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
Isoform_17917_3	chr11	-	1860	7	ISM	ENSMUSG00000020744.14	ENSMUST00000178003.8	2614	8	216	803	14	207	intron_retention	FALSE	canonical	2	19	junction_6	50.5854612402505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCATTCCTTGTGTCACTC	NA	False	NA	-16	True	ATTAAA	-8	NA	115518905	115505812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518462
Isoform_179170_79	chr8	-	5078	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	1	1	1	-1	multi-exon	FALSE	canonical	3	202	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTCCAAGACCTTTTT	NA	False	NA	-6	True	AATAAA	-21	NA	127320724	127315035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127318568_127319178
Isoform_179171_267	chr8	-	2717	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	1	2362	1	-2362	multi-exon	FALSE	canonical	3	202	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGCCTTACTGTCTGT	NA	False	NA	-2	True	AATACA	-18	NA	127320724	127317396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127318568_127319178
Isoform_179178_18	chr8	-	2795	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	-76	2361	-76	-2361	multi-exon	FALSE	canonical	3	202	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGCCTTACTGTCTGTC	NA	False	NA	-1	True	AATACA	-19	NA	127320801	127317395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127318568_127319178
Isoform_179189_2623	chr8	-	1024	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-3	3881	1	438	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	2623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGCGGTGTGTTGTCT	NA	False	NA	NA	False	ATTAAA	-34	NA	127672593	127661297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
Isoform_17919_62	chr11	-	2279	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	36	-8	-2	8	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGACCATTGTAAGGAT	NA	False	NA	-5	True	AATAAA	-25	NA	115518935	115504995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
Isoform_179190_112	chr8	-	4905	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-3	0	1	0	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTCTTTCTATTTCA	NA	False	NA	-3	True	NA	NA	NA	127672593	127657416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
Isoform_179196_254	chr8	-	1429	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-3	3476	1	843	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTTTGTCAGTTGCTA	NA	False	NA	-22	True	ATTAAA	-17	NA	127672593	127660892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
Isoform_17920_17	chr11	-	2294	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	13	0	-2	0	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGACTGCAGACCATT	NA	False	NA	-13	True	AATAAA	-17	NA	115518958	115505003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
Isoform_179206_71	chr8	-	3391	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	24	9	2	-9	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAAAGATGCTTAGTG	NA	False	NA	-9	True	ATTAAA	-20	NA	127697797	127673930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
Isoform_179208_105	chr8	-	1548	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	24	1852	2	2	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTTCAAATGGTCACT	NA	False	NA	-9	True	AATAAA	-23	NA	127697797	127675773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
Isoform_179212_7	chr8	-	1625	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	-54	1853	-54	1	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGTTCAAATGGTCAC	NA	False	NA	-10	True	AATAAA	-22	NA	127697875	127675774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
Isoform_179216_4	chr8	-	1389	10	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	50.1686046137312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGTTCAAATGGTCAC	NA	False	NA	-10	True	AATAAA	-22	NA	127697785	127675774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127697487_127697660_127697739
Isoform_179217_4	chr8	-	3846	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	-6	-1503	-6	-260	multi-exon	FALSE	canonical	3	23	junction_3	18.4451137763426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCTATCATCTTCCT	NA	False	NA	NA	False	AATAAA	-22	NA	129960505	129943094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
Isoform_179218_3	chr8	-	3229	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	-46	-846	-18	272	multi-exon	FALSE	canonical	3	23	junction_3	18.4451137763426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGCCATGATG	NA	False	NA	NA	False	NA	NA	NA	129960545	129943751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
Isoform_179220_5	chr8	-	3128	4	FSM	ENSMUSG00000071302.11	ENSMUST00000189965.2	343	4	38	-2823	0	271	multi-exon	FALSE	canonical	3	6	junction_3	25.9358182185692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGCCATGAT	NA	False	NA	NA	False	NA	NA	NA	129960849	129943752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960789
Isoform_179221_19	chr8	-	3685	3	NIC	ENSMUSG00000071302.11	novel	2337	4	NA	NA	2	-314	intron_retention	FALSE	canonical	3	10	junction_2	29	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGTAAGGCTGGTTATT	NA	False	NA	NA	False	AATAAA	-11	NA	129960525	129943148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_129946633_129948024_129948086_129960385
Isoform_179222_5	chr8	-	3631	3	NIC	ENSMUSG00000071302.11	novel	343	4	NA	NA	12	-314	intron_retention	FALSE	canonical	1	1	junction_2	33.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGTAAGGCTGGTTATT	NA	False	NA	NA	False	AATAAA	-11	NA	129960875	129943148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_129946633_129948024_129948086_129960789
Isoform_179223_11	chr8	-	1315	3	Intergenic	novelGene_10805	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	28.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTTGTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	89779672	89774460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_89775532_89776215_89776356_89779568
Isoform_179225_10	chr8	-	2578	5	Intergenic	novelGene_10803	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	5	junction_1	49.0433481728154	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTCCATTTTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	89779665	89772260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_89772303_89772323_89774422_89775330_89775532_89776215_89776356_89779568
Isoform_179226_39	chr8	-	2349	5	Intergenic	novelGene_10804	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_4	28.6574597618142	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTCCATTTTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	89779670	89772260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89779568
Isoform_179228_23	chr8	-	2004	3	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	38.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27718613	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716411_27716753_27716822_27717284
Isoform_179229_23	chr8	-	1009	3	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	904	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	38.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27717618	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716411_27716753_27716822_27717284
Isoform_17923_7	chr11	-	1309	6	NIC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	9	212	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	57.631241527491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTGTCACTCCTATA	NA	False	NA	-11	True	ATTAAA	-13	NA	115518947	115505807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115518890
Isoform_179233_5	chr8	-	2471	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.1111993199089	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCGCCTTTTCTCTGGGT	NA	False	NA	-2	True	AATAAA	-25	NA	27730318	27715793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719325_27730214
Isoform_179234_9	chr8	-	2806	6	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-272	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_4	40.6890648700606	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27740916	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719313_27739175_27739238_27740517
Isoform_179235_8	chr8	-	2449	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	47.5887329102173	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27730318	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719313_27730214
Isoform_179238_6	chr8	-	2469	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9465	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	47.3312792981555	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27730317	27715803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719334_27730214
Isoform_179239_5	chr8	-	1116	3	NNC	ENSMUSG00000031489.16	novel	1864	3	NA	NA	898	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	15.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTCCCCTGCTCGCC	NA	False	NA	-14	True	AATAAA	-13	NA	27717624	27715805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_27716411_27716753_27716925_27717284
Isoform_17924_5	chr11	-	2094	6	NIC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	57.631241527491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTGACTGCAGACCA	NA	False	NA	-15	True	AATAAA	-15	NA	115518930	115505005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115518890
Isoform_179240_63	chr8	-	609	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	156	junction_2	25.5	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAATCCTTTGTGGATG	9355	False	NA	-22	True	TATAAA	-7	NA	111248783	111222002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_111222416_111227500_111227611_111248697
Isoform_179244_7	chr8	-	672	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_2	70.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAATCCTTTGTGGATG	9499	False	NA	-22	True	TATAAA	-7	NA	111248639	111222002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_111222416_111227500_111227611_111248490
Isoform_179246_5	chr8	-	1273	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_2	70.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTCCTGAGTCTATCT	9561	False	NA	NA	False	NA	NA	NA	111248577	111221339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_111222416_111227500_111227611_111248490
Isoform_179247_56	chr8	-	1672	5	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	180.045133230532	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAAAGTCATTTAATTCC	NA	False	NA	NA	False	AATAAA	-18	NA	125448710	125434716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_125435912_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_179249_15	chr2	+	452	2	Antisense	novelGene_ENSMUSG00000074758.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	283	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	1070	False	NA	NA	False	NA	NA	NA	143991092	143998264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_143991331_143998050
Isoform_179251_3	chr8	-	2105	2	Intergenic	novelGene_10649	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49296340	49288076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_49290094_49296252
Isoform_179252_13	chr8	-	2705	2	Intergenic	novelGene_10907	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGCCTTGGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	108408873	108404231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_108406853_108408789
Isoform_179254_3	chr8	-	6825	3	Intergenic	novelGene_10549	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTTTCTGCTTCTT	NA	False	NA	NA	False	AAGAAA	-34	NA	23656923	23648970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_23654308_23654327_23655721_23656828
Isoform_179257_8	chr8	-	2743	3	Antisense	novelGene_ENSMUSG00000041438.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	3	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAAAAGAAAGAT	NA	False	NA	NA	False	AAGAAA	-33	NA	107641039	107638062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_107640647_107640857_107641000_107641022
Isoform_179258_3	chr8	-	7473	3	NNC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	-10	0	intron_retention	FALSE	canonical	3	4	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTGCGCCTTTTTCCT	NA	False	NA	0	True	NA	NA	NA	110464381	110453082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_110460378_110461936_110461996_110464262
Isoform_179261_3	chr8	-	2482	10	NNC	ENSMUSG00000031537.16	novel	3587	8	NA	NA	0	-969	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	43.2900068301915	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTAATGTACTGATTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	23196575	23166968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_23168074_23168097_23168675_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_179262_6	chr8	-	1979	18	NNC	ENSMUSG00000037260.9	novel	485	5	NA	NA	77	1978	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_1	29.6162304702411	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAATGATGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	26466704	26432502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_26432728_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
Isoform_179264_3	chr8	-	752	4	Intergenic	novelGene_10760	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAACCATAAGAA	NA	False	NA	NA	False	NA	NA	NA	84617173	84613715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_84614187_84616536_84616646_84616915_84616940_84617025
Isoform_179265_6	chr8	-	2611	2	Intergenic	novelGene_10652	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	8696	False	NA	NA	False	NA	NA	NA	52188473	52184668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_52187093_52188286
Isoform_179266_4	chr8	-	2049	2	Intergenic	novelGene_10627	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTGGACTCCTGGTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	43633332	43628127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_43630078_43633233
Isoform_179268_4	chr8	-	2364	5	NNC	ENSMUSG00000004383.19	novel	3669	15	NA	NA	9	-65876	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.75961064797157	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTCCTTTGCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	74080159	73837567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_73838293_73843030_73843114_73858458_73858761_73940752_73940941_74079093
Isoform_179270_4	chr8	-	309	2	NNC	ENSMUSG00000031949.18	novel	3159	10	NA	NA	31	-20235	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTAACAGGATTCTGGG	NA	False	NA	-5	True	AATAAA	-19	NA	112718903	112718419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_112718638_112718812
Isoform_179273_3	chr8	-	1840	2	Antisense	novelGene_ENSMUSG00000109893.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTCATGCCTTCAATAA	NA	False	NA	NA	False	AATAAA	-24	NA	83481679	83474902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_83476566_83481502
Isoform_179275_3	chr8	-	473	2	Antisense	novelGene_ENSMUSG00000059854.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAATGTGGTTGAGTTT	6977	False	NA	NA	False	NA	NA	NA	111171023	111163466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_111163780_111170863
Isoform_179276_3	chr8	-	364	2	Antisense	novelGene_ENSMUSG00000065952.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	3626690	3619784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_3619915_3626456
Isoform_179278_3	chr8	-	2314	8	NNC	ENSMUSG00000031537.16	novel	1106	7	NA	NA	8	2046	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	37.9618498076204	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGATTGACTCTGCTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	23196567	23169181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_23170829_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_179281_11	chr8	+	2742	17	ISM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-30	4185	2	1776	5prime_fragment	FALSE	canonical	3	218	junction_1	25.2904996985034	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATAGCCCTGTTATTC	NA	False	NA	NA	False	NA	NA	NA	3443007	3502416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814
Isoform_179284_316	chr8	+	5267	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	1	3	1	-2	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTCAGGCTGAAACAGA	NA	False	NA	21	True	AATAAA	-11	NA	3443038	3506598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
Isoform_179287_94	chr8	+	5300	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-30	1	2	0	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443007	3506600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
Isoform_179289_9	chr8	+	2822	16	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2	1764	intron_retention	TRUE	canonical	3	218	junction_1	25.9508937974955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCAAATGTGGTGGCATA	NA	False	NA	NA	False	NA	NA	NA	3443007	3502404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501679_3501814
Isoform_179293_13	chr8	+	5359	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	81.8694692788466	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443039	3506600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_3443103_3475294_3475386_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
Isoform_179295_9	chr8	+	5330	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	83.7517014752536	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGCTGAAACAGAC	NA	False	NA	22	True	AATAAA	-12	NA	3443038	3506599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_3443103_3476497_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
Isoform_179297_7	chr8	+	5409	20	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	63.6920830279809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGCTGAAACAGAC	NA	False	NA	22	True	AATAAA	-12	NA	3443019	3506599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3443225_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
Isoform_17930_1122	chr11	-	2671	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	37	1	16	-1	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTCTTCATTTCTC	4507	False	NA	-2	True	AATAAA	-18	NA	115599386	115534871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
Isoform_17931_40	chr11	-	2745	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	-37	1	-37	-1	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTCTTCATTTCTC	4433	False	NA	-2	True	AATAAA	-18	NA	115599460	115534871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
Isoform_179322_111	chr8	+	1966	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	33	0	1	0	multi-exon	FALSE	canonical	3	37	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	6349	False	NA	16	True	AGTAAA	-17	NA	3543170	3547208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3543310_3545381
Isoform_179324_8	chr8	+	2073	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	-74	0	-74	0	multi-exon	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	6242	False	NA	16	True	AGTAAA	-17	NA	3543063	3547208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3543310_3545381
Isoform_179330_275	chr8	+	2023	14	FSM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	40	2	2	1	multi-exon	FALSE	canonical	3	278	junction_8	29.619280463035	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCGGTGGTCTAATTTGT	NA	False	NA	10	True	AATAAA	-11	NA	3550496	3565230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
Isoform_179331_594	chr8	+	2000	14	FSM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	63	2	-14	1	multi-exon	FALSE	canonical	3	278	junction_8	29.619280463035	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCGGTGGTCTAATTTGT	NA	False	NA	10	True	AATAAA	-11	NA	3550519	3565230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
Isoform_179341_6	chr8	+	4470	35	NIC	ENSMUSG00000004565.16	novel	4496	35	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	73.7352941176471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTGCTGTCTTTGGG	NA	False	NA	16	True	AATAAA	-20	NA	3565412	3594266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3565557_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_179342_10	chr8	+	4458	35	NIC	ENSMUSG00000004565.16	novel	4496	35	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	70.8391130011934	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTGCTGTCTTTGGG	NA	False	NA	16	True	AATAAA	-20	NA	3565412	3594266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3565557_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_179344_13	chr8	+	4456	35	FSM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	-12	0	2	0	multi-exon	FALSE	canonical	1	5	junction_1	71.0843412012367	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3565412	3594267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_179346_10	chr8	+	4395	34	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	64.3462568557788	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCTGGTGCTGTCTTT	NA	False	NA	13	True	AATAAA	-17	NA	3565410	3594263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3565557_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_179348_7	chr8	+	4361	35	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	71.0022905230217	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3565639	3594262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3565691_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_179349_9	chr8	+	4362	35	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	71.2493610728349	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3565637	3594264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3565691_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_179352_101	chr8	+	4407	32	ISM	ENSMUSG00000004565.16	ENSMUST00000111070.4	4496	35	1479	2	0	-2	3prime_fragment	FALSE	canonical	1	71	junction_27	50.3064283424121	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3566862	3594264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_179354_164	chr8	+	4395	32	ISM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	1438	3	0	-2	3prime_fragment	FALSE	canonical	1	71	junction_27	44.5244031581209	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3566862	3594264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_179367_9	chr8	+	1021	5	ISM	ENSMUSG00000004565.16	ENSMUST00000207941.2	4263	31	24336	-7	135	0	3prime_fragment	FALSE	canonical	3	270	junction_2	13.1624465810882	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	3416	False	NA	17	True	AATAAA	-21	NA	3591209	3594267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_179368_5	chr8	+	839	2	FSM	ENSMUSG00000065952.14	ENSMUST00000138454.2	637	2	-19	-183	-19	183	multi-exon	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTCTGCCTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	3617970	3623833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3618097_3623120
Isoform_179369_5	chr8	+	965	3	FSM	ENSMUSG00000065952.14	ENSMUST00000153341.8	960	3	-11	6	-6	-6	multi-exon	FALSE	canonical	3	24	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTATTTATCTGTTT	NA	False	NA	18	True	ATTAAA	-38	NA	3617983	3628591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3618097_3623120_3623222_3627840
Isoform_179370_4	chr8	+	745	5	ISM	ENSMUSG00000065952.14	ENSMUST00000136592.2	1621	6	-19	4255	-11	1924	5prime_fragment	FALSE	canonical	3	9	junction_4	8.46684711093805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTGTGCGATATTCTC	NA	False	NA	NA	False	NA	NA	NA	3617978	3630521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_3618097_3623120_3623222_3627840_3628046_3629722_3629922_3630399
Isoform_179371_4	chr8	+	708	4	NNC	ENSMUSG00000065952.14	novel	1621	6	NA	NA	3	-11	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	10.3387082795139	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTTTATTTATTTATC	NA	False	NA	13	True	ATTAAA	-41	NA	3618000	3628586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_3618097_3623120_3623222_3627840_3628046_3628280
Isoform_179373_4	chr8	+	655	4	NIC	ENSMUSG00000065952.14	novel	1621	6	NA	NA	-22	1924	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTGTGCGATATTCTC	NA	False	NA	NA	False	NA	NA	NA	3617967	3630521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3618097_3627840_3628046_3629722_3629922_3630399
Isoform_179375_14	chr8	+	4161	18	NIC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-159	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	42.9626859907903	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTACGTCTCGTGTTTT	6495	False	NA	55	True	NA	NA	NA	3637634	3659077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_179377_19	chr8	+	4053	18	FSM	ENSMUSG00000044433.17	ENSMUST00000207077.2	3832	18	-101	-120	-83	0	multi-exon	FALSE	canonical	3	30	junction_5	41.5373263579742	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTCTCCTCCCTA	6571	False	NA	26	True	AATAAA	-22	NA	3637710	3659048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_179379_14	chr8	+	4178	18	FSM	ENSMUSG00000044433.17	ENSMUST00000207077.2	3832	18	-199	-147	-181	0	multi-exon	TRUE	canonical	3	30	junction_5	41.5373263579742	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTACGTCTCGTGTT	6473	False	NA	53	True	NA	NA	NA	3637612	3659075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_179380_46	chr8	+	4064	17	FSM	ENSMUSG00000044433.17	ENSMUST00000171962.3	3925	17	-118	-21	-118	-6	multi-exon	FALSE	canonical	3	47	junction_7	34.0677174903163	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACCAAGTTTACGTCT	6536	False	NA	47	True	AATAAA	-43	NA	3637675	3659069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_179381_17	chr8	+	4116	17	FSM	ENSMUSG00000044433.17	ENSMUST00000171962.3	3925	17	-167	-24	-167	-3	multi-exon	FALSE	canonical	3	47	junction_7	34.0677174903163	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAAGTTTACGTCTCGT	6487	False	NA	50	True	NA	NA	NA	3637626	3659072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_179384_62	chr8	+	4109	17	FSM	ENSMUSG00000044433.17	ENSMUST00000057028.15	4450	17	341	0	-160	0	multi-exon	FALSE	canonical	3	66	junction_7	31.8251448347058	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTACGTCTCGTGTT	6494	False	NA	53	True	NA	NA	NA	3637633	3659075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_179387_5	chr8	+	3604	15	ISM	ENSMUSG00000044433.17	ENSMUST00000171962.3	3925	17	10817	-24	-1937	-3	3prime_fragment	FALSE	canonical	3	47	junction_5	34.5829378716837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAAGTTTACGTCTCGT	7881	False	NA	50	True	NA	NA	NA	3648610	3659072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_179388_25	chr8	+	3604	15	ISM	ENSMUSG00000044433.17	ENSMUST00000057028.15	4450	17	11314	4	-1941	-4	3prime_fragment	FALSE	canonical	3	66	junction_5	31.8741946676977	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCAAGTTTACGTCTCG	7877	False	NA	49	True	AATAAA	-45	NA	3648606	3659071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_179395_147	chr8	+	306	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	24	863	20	0	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5611	False	NA	10	True	NA	NA	NA	3671574	3673372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
Isoform_179396_12	chr8	+	1175	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	11	7	7	-7	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAGCCCTACTCTTCA	5598	False	NA	NA	False	AAAACA	-7	NA	3671561	3674228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
Isoform_179401_138	chr8	+	1864	19	FSM	ENSMUSG00000004626.15	ENSMUST00000004745.9	1847	19	-17	0	0	0	multi-exon	FALSE	canonical	3	69	junction_17	74.555886735479	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4585	False	NA	16	True	AATAAA	-22	NA	3681152	3692795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
Isoform_179404_773	chr8	+	1861	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	198	849	0	0	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4585	False	NA	16	True	AATAAA	-22	NA	3681152	3692795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
Isoform_179405_105	chr8	+	2711	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	198	-1	0	1	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCGGCTTCCTAGTAACC	4585	False	NA	NA	False	NA	NA	NA	3681152	3693645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
Isoform_179406_15	chr8	+	3079	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	187	-358	-10	358	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTTACAGGAATTTA	4574	False	NA	6	True	NA	NA	NA	3681141	3694002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
Isoform_17941_5	chr11	-	4974	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	-46	1	-37	-1	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCTGTGTTTGCATCT	4074	False	NA	-2	True	AATGAA	-17	NA	115704502	115690009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
Isoform_179413_27	chr8	+	1935	19	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	83.3438697042797	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4585	False	NA	16	True	AATAAA	-22	NA	3681152	3692795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
Isoform_17942_12	chr11	-	4778	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	-19	170	-10	-170	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTCTATCTATTAACT	4101	False	NA	NA	False	TTTAAA	-5	NA	115704475	115690178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
Isoform_179420_41	chr8	+	1999	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	213	334	2	1	multi-exon	FALSE	canonical	3	198	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGCTATTATTATTGT	NA	False	NA	15	True	NA	NA	NA	3726511	3730921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3726604_3729014
Isoform_179421_4	chr8	+	2337	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	216	-7	5	7	multi-exon	FALSE	canonical	3	198	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTTATGTATGTCAGT	NA	False	NA	NA	False	TTTAAA	-4	NA	3726514	3731262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3726604_3729014
Isoform_179423_111	chr8	+	708	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	211	1627	0	-1292	multi-exon	FALSE	canonical	3	198	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTTGTGTCTTGTG	NA	False	NA	23	True	GATAAA	-23	NA	3726509	3729628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3726604_3729014
Isoform_179424_52	chr8	+	741	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	178	1627	-33	-1292	multi-exon	FALSE	canonical	3	198	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTTGTGTCTTGTG	NA	False	NA	23	True	GATAAA	-23	NA	3726476	3729628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3726604_3729014
Isoform_179425_7	chr8	+	1561	11	FSM	ENSMUSG00000011832.17	ENSMUST00000239400.2	1542	11	-19	0	-19	0	multi-exon	FALSE	canonical	3	12	junction_10	5.9464274989274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCTCCGGATGTAGT	NA	False	NA	NA	False	AATAAA	-24	NA	4216547	4243701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4243548
Isoform_179426_24	chr8	+	3979	20	FSM	ENSMUSG00000011832.17	ENSMUST00000176149.9	3938	20	-46	5	-46	0	multi-exon	FALSE	canonical	3	9	junction_12	7.46144290294483	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216520	4258046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_179427_16	chr8	+	3887	19	FSM	ENSMUSG00000011832.17	ENSMUST00000176825.3	3728	19	-159	0	6	0	multi-exon	FALSE	canonical	3	9	junction_13	6.86285402963656	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216579	4258046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_179428_5	chr8	+	3861	19	NIC	ENSMUSG00000011832.17	novel	3938	20	NA	NA	-5	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	9.20899318902754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGGGATGCCGAATAG	NA	False	NA	0	True	AATAAA	-15	NA	4216561	4258044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_179429_4	chr8	+	1550	11	NNC	ENSMUSG00000011832.17	novel	1542	11	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	7.52927619363243	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCTCCGGATGTAGT	NA	False	NA	NA	False	AATAAA	-24	NA	4216554	4243701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_4216764_4233491_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4243548
Isoform_17943_70	chr11	-	4924	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	4	1	4	-1	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCTGTGTTTGCATCT	4124	False	NA	-2	True	AATGAA	-17	NA	115704452	115690009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
Isoform_179430_6	chr8	+	3938	20	NNC	ENSMUSG00000011832.17	novel	3938	20	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	7.81397285285484	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216557	4258046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_4216764_4233491_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_179431_3	chr8	+	3914	19	NNC	ENSMUSG00000011832.17	novel	3728	19	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	7.41723884601038	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGATGCCGAATAGAGA	NA	False	NA	3	True	AATAAA	-18	NA	4216549	4258047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_4216764_4233491_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_179432_17	chr8	+	2114	5	ISM	ENSMUSG00000011832.17	ENSMUST00000175650.8	2451	7	2127	-2	-227	2	3prime_fragment	FALSE	canonical	3	19	junction_1	6.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGGGATGCCGAATAG	2368	False	NA	0	True	AATAAA	-15	NA	4255501	4258044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_179438_12	chr8	+	3413	13	NNC	ENSMUSG00000002948.20	novel	1626	13	NA	NA	13	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	129.570738937805	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288841	4297888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_4289034_4290687_4290736_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4296987_4297008
Isoform_179441_642	chr8	+	3396	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110998.9	3497	11	102	-1	13	0	multi-exon	FALSE	canonical	3	271	junction_7	24.9617707705203	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288841	4297897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
Isoform_179443_43	chr8	+	3466	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110998.9	3497	11	23	8	2	-8	multi-exon	FALSE	canonical	3	271	junction_7	24.9617707705203	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288762	4297888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
Isoform_179446_16	chr8	+	3478	10	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	10	-8	intron_retention	FALSE	canonical	3	277	junction_9	23.6366528515501	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288838	4297888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294776_4294860_4295004_4295542_4295589_4295694
Isoform_17945_7	chr11	-	5125	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	0	-196	0	196	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCCAAAGGCTCATTTT	4120	False	NA	NA	False	TATAAA	-15	NA	115704456	115689812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
Isoform_179453_196	chr8	+	1517	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	18	1	4	1	multi-exon	FALSE	canonical	3	110	junction_3	11.3880419739304	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGATTCCCCCTTTGA	NA	False	NA	15	True	AATAAA	-15	NA	4303097	4306219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
Isoform_179454_4	chr8	+	2673	2	ISM	ENSMUSG00000023235.15	ENSMUST00000153254.3	362	3	-22	2940	-8	2666	5prime_fragment	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	4375218	4380359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_4375289_4377756
Isoform_179455_4	chr8	+	1126	7	NIC	ENSMUSG00000023235.15	novel	867	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	6.71854812358213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTAATGACTGACA	NA	False	NA	NA	False	AATAAA	-15	NA	4375226	4410000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_4375289_4377756_4377851_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
Isoform_179456_4	chr8	+	598	4	NNC	ENSMUSG00000023235.15	novel	362	3	NA	NA	8	6	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	5.79271573232759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGATGTTTGTGTAAGA	NA	False	NA	NA	False	NA	NA	NA	4375217	4384813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_4375289_4377756_4377894_4383122_4383231_4384531
Isoform_179458_6	chr8	+	2650	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	265	6560	6	-2	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAGAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4543463	4575120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_179459_7	chr8	+	2415	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	266	6794	7	-236	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTGGGGCAAGAATG	NA	False	NA	NA	False	NA	NA	NA	4543464	4574886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_179460_76	chr8	+	1568	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	283	7624	0	5	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTGCGCCAGAGCTTA	NA	False	NA	16	True	AATAAA	-17	NA	4543481	4574056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_179461_11	chr8	+	1738	12	NNC	ENSMUSG00000008206.17	novel	9475	11	NA	NA	89	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.5604327807065	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTCTGCGCCAGAGC	NA	False	NA	13	True	AATAAA	-14	NA	4543287	4574053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_4543306_4543326_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_179463_32	chr8	+	2184	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	283	7008	0	-450	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCAGAGCCTGGCATGG	NA	False	NA	2	True	AATAAA	-14	NA	4543481	4574672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_179466_8	chr8	+	2387	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	87	7001	87	-443	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGGCATGGTGACTCA	NA	False	NA	9	True	AATAAA	-21	NA	4543285	4574679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_179470_99	chr8	+	1687	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-6	683	-6	168	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAATGTGGTAAAGTCTT	NA	False	NA	4	True	NA	NA	NA	4663160	4679548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
Isoform_179471_19	chr8	+	4463	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-6	-2093	-6	2093	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTGCTTTTTTATG	NA	False	NA	NA	False	AATAAA	-20	NA	4663160	4682324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
Isoform_179475_24	chr8	+	1805	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-6	168	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAATGTGGTAAAGTCTT	NA	False	NA	4	True	NA	NA	NA	4663160	4679548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
Isoform_179477_16	chr8	+	2989	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	52	2150	42	-2150	multi-exon	FALSE	canonical	3	35	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGCTATGTAGAATGA	NA	False	NA	11	True	ATTAAA	-21	NA	10027758	10040005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_10028020_10032863_10032971_10037384
Isoform_179479_8	chr8	+	5135	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	51	5	41	-5	multi-exon	FALSE	canonical	3	35	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTAGTGAGTCTTATT	NA	False	NA	14	True	AATAAA	-15	NA	10027757	10042150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_10028020_10032863_10032971_10037384
Isoform_17948_200	chr11	-	3975	19	FSM	ENSMUSG00000020752.12	ENSMUST00000021097.10	3971	19	-5	1	-5	-1	multi-exon	FALSE	canonical	3	54	junction_14	12.1025708930881	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTCTTGGGTGTTTTA	NA	False	NA	-3	True	AATAAA	-32	NA	115824308	115783421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
Isoform_179480_8	chr8	+	4876	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	37	278	27	-278	multi-exon	FALSE	canonical	3	35	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAATGTCCTCTTAAC	NA	False	NA	2	True	AATAAA	-14	NA	10027743	10041877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_10028020_10032863_10032971_10037384
Isoform_179483_103	chr8	+	2892	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	32	2150	32	-2150	multi-exon	FALSE	canonical	3	144	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGCTATGTAGAATGA	NA	False	NA	11	True	ATTAAA	-21	NA	10027748	10040005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_10028020_10037384
Isoform_179487_26	chr8	+	4786	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	10	278	10	-278	multi-exon	FALSE	canonical	3	144	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAATGTCCTCTTAAC	NA	False	NA	2	True	AATAAA	-14	NA	10027726	10041877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_10028020_10037384
Isoform_179489_40	chr8	+	5040	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	32	2	32	-2	multi-exon	FALSE	canonical	3	144	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGTGAGTCTTATTCTA	NA	False	NA	17	True	AATAAA	-18	NA	10027748	10042153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_10028020_10037384
Isoform_17949_32	chr11	-	3577	21	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.3422985767573	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTCTTGGGTGTTTTA	NA	False	NA	-3	True	AATAAA	-32	NA	115824305	115783421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_115783470_115783502_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614_115823745_115824106
Isoform_179493_26	chr8	+	6422	48	FSM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	26	2	26	-2	multi-exon	TRUE	canonical	3	15	junction_4	6.83737233737166	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGTTTTCTGTCCCCC	8506	False	NA	8	True	AATAAA	-18	NA	11362830	11499285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11363115_11363418_11363508_11363629_11363685_11404276_11404358_11448661_11448797_11449703_11449749_11451147_11451265_11452162_11452235_11452983_11453020_11453341_11453405_11454963_11455000_11456812_11456855_11458051_11458145_11458881_11458918_11459421_11459473_11460054_11460100_11463978_11464033_11464741_11464809_11465363_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
Isoform_179494_208	chr8	+	1231	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	74	2	-4	-2	multi-exon	FALSE	canonical	3	162	junction_1	41.4568048294447	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGAGTTTGTGGTTGT	NA	False	NA	31	True	AATAAA	-45	NA	11547579	11563285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
Isoform_179498_7	chr8	+	1301	9	NIC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	3	-2	intron_retention	FALSE	canonical	3	162	junction_1	41.5120464443756	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGAGTTTGTGGTTGT	NA	False	NA	31	True	AATAAA	-45	NA	11547589	11563285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559558_11560226_11560348_11561876_11561998_11562894
Isoform_179499_4	chr8	+	4489	7	NIC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	7	-4	intron_retention	FALSE	canonical	3	162	junction_1	45.852723171282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTGGAGTTTGTGGTT	NA	False	NA	29	True	AATAAA	-43	NA	11547574	11563283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11560348_11561876_11561998_11562894
Isoform_1795_8	chr10	-	2126	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	399	1798	4	202	multi-exon	FALSE	canonical	3	77	junction_2	74.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCATAGGTCGTGA	NA	False	NA	NA	False	AATAAA	-11	NA	29238039	29221969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_29223880_29230287_29230444_29237979
Isoform_17950_3	chr11	-	3814	19	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.9645972744419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAATCTTTTCTTGGGT	NA	False	NA	-9	True	AATAAA	-26	NA	115824308	115783427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_115783470_115783502_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115823614
Isoform_179500_83	chr8	+	1311	10	FSM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	46	2	-19	-2	multi-exon	FALSE	canonical	3	77	junction_1	63.9388210675343	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGAGTTTGTGGTTGT	NA	False	NA	31	True	AATAAA	-45	NA	11547613	11563285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
Isoform_179501_4	chr8	+	1392	9	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	20	-2	intron_retention	FALSE	canonical	3	77	junction_1	66.9261486640312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGAGTTTGTGGTTGT	NA	False	NA	31	True	AATAAA	-45	NA	11547612	11563285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559558_11560226_11560348_11561876_11561998_11562894
Isoform_179508_88	chr8	+	2455	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	359	0	314	0	multi-exon	FALSE	canonical	3	454	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	16	True	NA	NA	NA	11606424	11613251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11607046_11611417
Isoform_179509_502	chr8	+	2394	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	419	1	374	0	multi-exon	FALSE	canonical	3	454	junction_1	0	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTTTATTTCCTTAT	NA	False	NA	15	True	NA	NA	NA	11606484	11613250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11607046_11611417
Isoform_17951_3	chr11	-	4023	19	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	21.5487532222191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824308	115783424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115787013_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
Isoform_179515_124	chr8	+	1942	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	29	0	29	0	multi-exon	FALSE	canonical	3	111	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTTTATTTCCTTAT	NA	False	NA	15	True	NA	NA	NA	11608457	11613250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11608567_11611417
Isoform_17952_10	chr11	-	4151	18	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-15	-4	intron_retention	FALSE	canonical	3	54	junction_13	12.4283413141122	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824318	115783424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
Isoform_179520_11	chr8	+	4587	21	NIC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	22	-5	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	19.8655480669424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTGTTGCTTCATCT	NA	False	NA	12	True	ATTAAA	-22	NA	11778198	11885214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
Isoform_179521_8	chr8	+	4905	21	NIC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	160	-5	intron_retention	FALSE	canonical	3	22	junction_1	19.8655480669424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTGTTGCTTCATCT	NA	False	NA	12	True	ATTAAA	-22	NA	11777880	11885214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
Isoform_179526_10	chr8	+	2798	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	15	1638	15	1281	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCTCTGTTCTT	9643	False	NA	NA	False	NA	NA	NA	11808368	11883581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
Isoform_179527_3	chr8	+	3191	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	-17	1277	-17	-1277	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGAGAGCCCTCAAGTGC	9611	False	NA	NA	False	AATAAA	-28	NA	11808336	11883942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
Isoform_179528_6	chr8	+	4206	19	NIC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	15	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	24.1689654079129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTGTTGCTTCATCT	9643	False	NA	12	True	ATTAAA	-22	NA	11808368	11885214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
Isoform_179529_3	chr8	+	1087	8	NNC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	14	1281	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	32.945223555199	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAACTCTGAGAAT	9642	False	NA	NA	False	NA	NA	NA	11808367	11852240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11852001
Isoform_179530_5	chr8	+	4229	19	NIC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	15	-5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	24.2285924345189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTGTTGCTTCATCT	9643	False	NA	12	True	ATTAAA	-22	NA	11808368	11885214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_11808518_11831154_11831240_11832524_11832656_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
Isoform_179531_3	chr8	+	2837	3	FSM	ENSMUSG00000031511.17	ENSMUST00000209686.2	2205	3	47	-679	10	679	multi-exon	FALSE	canonical	3	82	junction_2	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	9638	False	NA	NA	False	NA	NA	NA	11808363	11836894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11808518_11831154_11832656_11835712
Isoform_179536_5	chr8	+	3836	25	ISM	ENSMUSG00000031441.16	ENSMUST00000091237.12	7443	29	21	16997	21	7	5prime_fragment	FALSE	canonical	3	50	junction_9	10.6092203085597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGACCTCTTCTGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	12807036	12901731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036
Isoform_179537_7	chr8	+	3373	26	NIC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_25	17.1588344592516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTCAAATGTGACCTC	NA	False	NA	NA	False	AATAAA	-14	NA	12807031	12901723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12901632
Isoform_179539_3	chr8	+	5553	30	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-2	1179	combination_of_known_junctions	FALSE	canonical	3	18	junction_29	16.6168259924755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATCTTACTCATTTGT	NA	False	NA	NA	False	ACTAAA	-18	NA	12807011	12916749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
Isoform_179540_10	chr8	+	7482	30	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_29	16.6168259924755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGAGGTTTATTTTGC	NA	False	NA	-1	True	ATTAAA	-13	NA	12807059	12918726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
Isoform_179542_56	chr8	+	3881	29	NIC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_28	12.9998037661798	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTGTGATGTGCTGC	NA	False	NA	7	True	AATAAA	-14	NA	12807059	12912202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911911
Isoform_179544_4	chr8	+	5164	30	FSM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	-5	2390	-5	768	multi-exon	FALSE	canonical	3	17	junction_29	16.4441186100344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCGTGTGCTTGAACTG	NA	False	NA	NA	False	NA	NA	NA	12807008	12916338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
Isoform_179546_16	chr8	+	5258	30	FSM	ENSMUSG00000031442.22	ENSMUST00000095456.10	3926	30	113	-1445	-8	-3	multi-exon	FALSE	canonical	3	19	junction_2	5.78098074781942	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCAGTAGCATTTCTG	8017	False	NA	8	True	AATAAA	-15	NA	12923939	13070498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
Isoform_179548_4	chr8	+	5112	31	NIC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_30	7.40577852460871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGACTCAGTAGCATTTC	8022	False	NA	6	True	AATAAA	-13	NA	12923944	13070496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695_13068800_13068938
Isoform_179550_7	chr8	+	5055	29	ISM	ENSMUSG00000031442.22	ENSMUST00000110879.9	3664	30	-58	-1194	6	2	intron_retention	FALSE	canonical	2	4	junction_1	7.42548012602827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAGCATTTCTGGTTAT	NA	False	NA	13	True	AATAAA	-20	NA	12965916	13070503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_12966055_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
Isoform_179551_23	chr8	+	3429	18	NIC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	1	-5	combination_of_known_splicesites	TRUE	canonical	3	14	junction_2	84.9753475343368	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTACTTTACTAATAC	NA	False	NA	21	True	AATAAA	-18	NA	13155740	13197935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_13155904_13156193_13156310_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
Isoform_179560_222	chr8	+	2213	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	8	8	8	-8	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8210	False	NA	13	True	AATAAA	-14	NA	13209168	13225330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
Isoform_179561_3490	chr8	+	2130	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	91	8	91	-8	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	3490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8293	False	NA	13	True	AATAAA	-14	NA	13209251	13225330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
Isoform_17957_1505	chr11	-	1306	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	32	68	32	-68	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGGTAGCCACCTGCCT	NA	False	NA	-38	True	AATAAA	-14	NA	115903513	115899350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
Isoform_17958_150	chr11	-	1366	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	30	10	30	-10	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGGGAGTCAGTGTTC	NA	False	NA	-1	True	NA	NA	NA	115903515	115899292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
Isoform_179584_3	chr8	+	3936	4	ISM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	-270	-1	-270	1	intron_retention	FALSE	canonical	3	38	junction_3	9.41629792788369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13337919	13347618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845
Isoform_179585_5	chr8	+	3641	4	ISM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	25	-1	4	1	intron_retention	FALSE	canonical	3	38	junction_3	9.41629792788369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13338214	13347618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845
Isoform_179586_7	chr8	+	3114	13	FSM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	-308	1529	-287	-1	multi-exon	FALSE	canonical	3	15	junction_7	13.4873912311545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTAGTTTTAATTTG	NA	False	NA	4	True	AATAAA	-16	NA	13337902	13371395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
Isoform_179587_11	chr8	+	2810	13	FSM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	-4	1529	-2	-1	multi-exon	FALSE	canonical	3	15	junction_7	13.4873912311545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTAGTTTTAATTTG	NA	False	NA	4	True	AATAAA	-16	NA	13338206	13371395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
Isoform_179588_3	chr8	+	2859	14	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.1297565954414	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTAGTTTTAATTTG	NA	False	NA	4	True	AATAAA	-16	NA	13338191	13371395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360203_13360341_13363805_13363957_13364557_13364651_13368842_13368923_13369762_13369913_13370760
Isoform_179589_3	chr8	+	2747	13	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	16.0770713198089	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTTTAATTTGATTTT	NA	False	NA	9	True	AATAAA	-21	NA	13338215	13371400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360203_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
Isoform_179591_6	chr8	+	2696	9	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	5	7169	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_7	12.8640730330638	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAAAGTGCCTGACCT	NA	False	NA	NA	False	AATAAA	-26	NA	13338215	13361254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144
Isoform_179593_16	chr8	+	3112	13	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-288	-1	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_7	12.8344155387856	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTAGTTTTAATTTG	NA	False	NA	4	True	AATAAA	-16	NA	13337901	13371395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
Isoform_179600_639	chr8	+	2469	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	37	5	-3	1	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2140	False	NA	89	True	AATAAA	-19	NA	13388787	13428443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_179602_126	chr8	+	2588	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	-82	5	-82	1	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2021	False	NA	89	True	AATAAA	-19	NA	13388668	13428443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_179618_67	chr8	+	2408	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	14	-1	-9	1	multi-exon	FALSE	canonical	3	161	junction_2	290.39449030586	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2134	False	NA	89	True	AATAAA	-19	NA	13388781	13428443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_179626_129	chr8	+	2492	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	13	-74	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGACTTTAATTGTTTGA	2156	False	NA	14	True	AATAAA	-28	NA	13388803	13428368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_179627_552	chr8	+	2539	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2184	False	NA	89	True	AATAAA	-19	NA	13388831	13428443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_179628_94	chr8	+	2580	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2142	False	NA	88	True	AATAAA	-18	NA	13388789	13428442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_179634_32	chr8	+	2690	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	377.101472860202	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2136	False	NA	89	True	AATAAA	-19	NA	13388783	13428443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_179639_76	chr8	+	2519	11	NIC	ENSMUSG00000038482.12	novel	2421	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	161	junction_2	301.20167662216	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2136	False	NA	88	True	AATAAA	-18	NA	13388783	13428442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_13388921_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_17965_18	chr11	-	2074	7	NIC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	-1	-55	intron_retention	FALSE	canonical	3	761	junction_3	60.2091262923561	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCCAGAGGTGGGTA	NA	False	NA	-25	True	AATAAA	-27	NA	115903546	115899337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115899541_115899628_115899792_115899873_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
Isoform_179653_47	chr8	+	3313	11	FSM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	-873	-740	10	0	multi-exon	FALSE	canonical	3	905	junction_5	61.5983766019852	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2153	False	NA	88	True	AATAAA	-18	NA	13388800	13428442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_179675_823	chr8	+	2285	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	13	3	12	-3	multi-exon	FALSE	canonical	3	559	junction_10	60.600055957127	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTCCAAGCTGGTAGA	NA	False	NA	14	True	AATAAA	-21	NA	13807688	13831935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
Isoform_179682_19	chr8	+	2223	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	19	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	166.691319791254	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTCCAAGCTGGTAGA	NA	False	NA	14	True	AATAAA	-21	NA	13807695	13831935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
Isoform_179686_10	chr8	+	853	2	FSM	ENSMUSG00000038398.9	ENSMUST00000211643.2	1131	2	-3	281	-3	-281	multi-exon	FALSE	canonical	3	312	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGGTATCCTTTGAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	13835641	13836756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13835885_13836146
Isoform_179689_14	chr8	+	2016	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	37	4	7	-4	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAAGAGCATCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	13835651	13849189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
Isoform_179690_457	chr8	+	1550	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	32	475	2	-475	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCAGGTTTTTTGTTT	NA	False	NA	7	True	AATAAA	-20	NA	13835646	13848718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
Isoform_179692_7	chr8	+	1664	10	NNC	ENSMUSG00000038398.9	novel	2057	9	NA	NA	3	-475	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	132.603092901009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCAGGTTTTTTGTTT	NA	False	NA	7	True	AATAAA	-20	NA	13835647	13848718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13847804_13847920_13848176
Isoform_179694_17	chr8	+	1504	8	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	340	475	310	-475	3prime_fragment	FALSE	canonical	3	271	junction_5	39.9571198733271	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCAGGTTTTTTGTTT	NA	False	NA	7	True	AATAAA	-20	NA	13835954	13848718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
Isoform_179696_589	chr8	+	3951	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	59	3	-4	-3	multi-exon	FALSE	canonical	3	209	junction_1	0	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTTCATGTGTACTTAA	NA	False	NA	14	True	ATTAAA	-16	NA	13919699	13931636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13919812_13927797
Isoform_179705_20	chr8	+	3977	2	FSM	ENSMUSG00000047710.9	ENSMUST00000128557.3	3977	2	-4	4	-4	-4	multi-exon	FALSE	canonical	2	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTTCATGTGTACTTA	NA	False	NA	13	True	ATTAAA	-15	NA	13919699	13931635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13919839_13927797
Isoform_179707_7	chr8	+	2068	11	NIC	ENSMUSG00000038365.9	novel	2035	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	39.2779836549688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTTTCTGCAACAA	NA	False	NA	13	True	AATAAA	-19	NA	13957772	13990521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13988921_13988949_13989562
Isoform_179708_112	chr8	+	2052	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	-40	0	-40	0	multi-exon	FALSE	canonical	3	86	junction_9	11.3572731903828	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTCTGCAACAAT	NA	False	NA	14	True	AATAAA	-20	NA	13957762	13990522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
Isoform_179711_34	chr8	+	2001	10	NIC	ENSMUSG00000038365.9	novel	2035	11	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_7	29.6514734295483	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTTTCTGCAACAA	NA	False	NA	13	True	AATAAA	-19	NA	13957809	13990521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981184_13981365_13985145_13985290_13989562
Isoform_179713_88	chr8	+	2455	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	-141	2879	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	81.7897032367495	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGAGGTATGATGCCTA	NA	False	NA	9	True	TATAAA	-17	NA	14938862	14947938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_14939119_14940491_14940624_14944571_14945231_14946530
Isoform_179717_353	chr8	+	2333	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	743	3781	-150	2880	multi-exon	FALSE	canonical	3	162	junction_1	24.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14938853	14947939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_14939119_14944571_14945231_14946530
Isoform_179723_25	chr8	+	6105	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	748	4	-145	-4	multi-exon	FALSE	canonical	3	162	junction_1	24.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTTATGTGCCATATAT	NA	False	NA	2	True	NA	NA	NA	14938858	14951716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_14939119_14944571_14945231_14946530
Isoform_179726_19	chr8	+	5511	29	FSM	ENSMUSG00000071176.11	ENSMUST00000084207.12	5528	29	7	10	7	1	multi-exon	FALSE	canonical	3	14	junction_9	8.00541908296359	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAGTATTTCAAGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	14961669	15051075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
Isoform_179729_9	chr8	+	5413	28	FSM	ENSMUSG00000071176.11	ENSMUST00000110800.9	5336	28	-85	8	-10	3	multi-exon	TRUE	canonical	3	16	junction_8	7.20558387346064	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTATTTCAAGTTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	14961652	15051077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
Isoform_179731_20	chr8	+	5355	28	FSM	ENSMUSG00000071176.11	ENSMUST00000110800.9	5336	28	-27	8	-6	3	multi-exon	FALSE	canonical	3	16	junction_8	7.20558387346064	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTATTTCAAGTTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	14961710	15051077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
Isoform_179736_14	chr8	+	2497	8	FSM	ENSMUSG00000039842.16	ENSMUST00000146819.8	2067	8	-426	-4	-8	4	multi-exon	FALSE	canonical	3	150	junction_4	14.4391757354209	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACCTGTATACCTTTC	NA	False	NA	NA	False	ATTAAA	-26	NA	18645171	18682921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531
Isoform_179739_138	chr8	+	4634	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	26	2	-7	-2	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAGCAATAATTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	18645172	18853203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
Isoform_179746_14	chr8	+	4840	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	26	-204	-7	204	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTCTTGTTAATGCTA	NA	False	NA	NA	False	AGTAAA	-15	NA	18645172	18853409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
Isoform_179751_7	chr8	+	4395	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_12	46.4396262785231	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGCAATAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	18645172	18853202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
Isoform_179752_6	chr8	+	3513	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	47.3133760743783	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	18645167	18853205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
Isoform_179761_168	chr8	+	2820	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	15	7944	13	-4	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTGCTTCTTGTTTTT	NA	False	NA	11	True	AATAAA	-21	NA	18896307	18933433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
Isoform_179786_23	chr8	+	563	2	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	107	24501	107	-14891	5prime_fragment	FALSE	canonical	3	882	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	20016572	20030997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_20016689_20030550
Isoform_179793_166	chr8	+	4222	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	106	10374	106	-764	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-18	NA	20016571	20045124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
Isoform_1798_7	chr10	-	2527	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	405	1391	10	609	multi-exon	FALSE	canonical	3	77	junction_2	74.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGGTTATGTGTTTC	NA	False	NA	NA	False	AGTAAA	-17	NA	29238033	29221562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_29223880_29230287_29230444_29237979
Isoform_17983_5310	chr11	-	1658	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	4	331	4	-331	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	5310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGTGTCAAACCTAAAT	NA	False	NA	-16	True	AATAAA	-13	NA	115915326	115913117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
Isoform_179831_49	chr8	+	2161	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-2741	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20016488	20043147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
Isoform_179844_13	chr8	+	4728	5	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	-91	-210	multi-exon	FALSE	canonical	3	434	junction_2	317.198183317622	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGATGTCTTTTTCT	NA	False	NA	NA	False	AATAAA	-10	NA	20697893	20727056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149
Isoform_179853_3	chr8	+	569	2	ISM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	-13	14745	-13	-14745	5prime_fragment	FALSE	canonical	3	474	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACAAACAAA	7175	False	NA	NA	False	NA	NA	NA	20143834	20158249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_20143957_20157802
Isoform_179857_9	chr8	+	4679	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-21	-10	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	337.871647227168	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGTAAAATAAAAG	7167	False	NA	NA	False	AATGAA	-23	NA	20143826	20172984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_20143957_20157802_20158009_20163109_20163409_20167037_20167158_20169060
Isoform_179860_4	chr8	+	4954	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-110	9	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	363.919891597038	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	7078	False	NA	NA	False	AATAAA	-14	NA	20143737	20173003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_20143957_20157802_20158176_20163109_20163409_20167037_20167158_20169060
Isoform_179869_50	chr8	+	4959	4	FSM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	-1	2	-1	-2	multi-exon	FALSE	canonical	3	45	junction_2	9.93310961716756	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCTGGCTCCCTTTGG	NA	False	NA	3	True	NA	NA	NA	22550735	22561641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_22550787_22551901_22552133_22555015_22555948_22557896
Isoform_179876_55	chr8	+	4964	4	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	51	junction_2	7.11805216802087	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCTGGCTCCCTTTGGT	NA	False	NA	4	True	NA	NA	NA	22550735	22561642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_22550787_22551901_22552137_22555015_22555948_22557896
Isoform_179882_130	chr8	+	3540	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	27	7	27	-7	multi-exon	FALSE	canonical	3	316	junction_5	36.370219952707	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATGTGGGAATTTTT	NA	False	NA	2	True	GATAAA	-15	NA	22682851	22710852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
Isoform_179887_25	chr8	+	3582	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	-14	6	-14	-6	multi-exon	TRUE	canonical	3	316	junction_5	36.370219952707	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATGTGGGAATTTTTC	NA	False	NA	3	True	GATAAA	-16	NA	22682810	22710853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
Isoform_179889_9	chr8	+	3648	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	27	-101	27	101	multi-exon	FALSE	canonical	3	316	junction_5	36.370219952707	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATAACTCTTGATTCA	NA	False	NA	NA	False	TTTAAA	-23	NA	22682851	22710960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
Isoform_179893_4	chr8	+	2857	4	FSM	ENSMUSG00000031480.16	ENSMUST00000160585.2	3276	4	-61	480	-29	-478	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATTTATGATGCATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	22717299	22749915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_22717446_22728470_22728614_22733012_22733973_22748307
Isoform_179894_6	chr8	+	2466	3	ISM	ENSMUSG00000031480.16	ENSMUST00000162447.2	3273	4	15901	473	15901	-473	3prime_fragment	FALSE	canonical	2	2	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGCATTTTGAACA	NA	False	NA	NA	False	AATAAA	-17	NA	22733278	22749920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_22733973_22742168_22742328_22748307
Isoform_179899_245	chr8	+	1278	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	49	188	12	-188	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTCCTGTGTTGATCA	NA	False	NA	12	True	ATTAAA	-21	NA	22901425	22919493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
Isoform_179902_418	chr8	+	1249	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	78	188	41	-188	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTCCTGTGTTGATCA	NA	False	NA	12	True	ATTAAA	-21	NA	22901454	22919493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
Isoform_179908_1384	chr8	+	3608	11	FSM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-46	4	-46	-4	multi-exon	FALSE	canonical	3	459	junction_6	45.0493063209635	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTACTTCTGACGTCT	NA	False	NA	11	True	AATAAA	-16	NA	22966757	23059624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
Isoform_179921_46	chr8	+	3633	11	NIC	ENSMUSG00000037656.10	novel	436	3	NA	NA	219	-5	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	165.224362610361	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTACTTCTGACGTC	NA	False	NA	10	True	AATAAA	-15	NA	22996460	23059623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_22996671_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
Isoform_179938_12	chr8	+	2565	14	FSM	ENSMUSG00000031538.7	ENSMUST00000033941.7	2525	14	-38	-2	-18	2	multi-exon	FALSE	canonical	0	0	junction_8	2.12619614785927	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGCATATCCATGGC	NA	False	NA	NA	False	AATAAA	-26	NA	23247724	23272862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_23247845_23257095_23257184_23258461_23258505_23261709_23261848_23262221_23262333_23262651_23262827_23263632_23263725_23265580_23265756_23266806_23266893_23268118_23268315_23268428_23268566_23268670_23268812_23270441_23270606_23271963
Isoform_179940_5	chr8	+	3518	16	ISM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	-3	10553	-3	9061	5prime_fragment	FALSE	canonical	2	9	junction_7	4.56362429069996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGGTGATGCATCTT	NA	False	NA	NA	False	NA	NA	NA	23349561	23422722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130
Isoform_179941_4	chr8	+	3929	18	FSM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	-3	5187	-3	-5187	multi-exon	FALSE	canonical	2	9	junction_7	4.68894009020697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAGAAAAAGGGATGG	NA	False	NA	NA	False	NA	NA	NA	23349561	23428088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130_23422731_23425495_23425815_23428004
Isoform_179942_3	chr8	+	3432	15	ISM	ENSMUSG00000031540.15	ENSMUST00000110696.8	9041	17	11	10553	-3	9061	5prime_fragment	FALSE	canonical	2	6	junction_1	4.43547848464572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGGTGATGCATCTT	NA	False	NA	NA	False	NA	NA	NA	23349561	23422722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_23349649_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130
Isoform_179948_965	chr8	+	4340	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	965	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCGTGAGTTGTGA	NA	False	NA	19	True	ACTAAA	-12	NA	23901516	23939643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_23902345_23907345_23907424_23936181_23937024_23937051
Isoform_179950_131	chr8	+	4384	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-45	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCGTGAGTTGTGA	NA	False	NA	19	True	ACTAAA	-12	NA	23901472	23939643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_23902345_23907345_23907424_23936181_23937024_23937051
Isoform_179990_352	chr8	+	1210	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	69	2	21	0	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCTGTGTGAGTATT	NA	False	NA	12	True	AATAAA	-12	NA	25507295	25513274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
Isoform_179991_43	chr8	+	1259	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	21	1	21	1	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTGTGTGAGTATTT	NA	False	NA	13	True	AATAAA	-13	NA	25507247	25513275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
Isoform_179994_133	chr8	+	4057	18	FSM	ENSMUSG00000031565.19	ENSMUST00000117179.9	4046	18	-2	-9	-2	5	multi-exon	FALSE	non_canonical	0	0	junction_9	66.5202833494101	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26008808	26064806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_179998_9	chr8	+	4948	18	FSM	ENSMUSG00000031565.19	ENSMUST00000117179.9	4046	18	-27	-875	-4	-58	multi-exon	FALSE	non_canonical	0	0	junction_9	66.5202833494101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATAGTGGTTTTTTTTT	NA	False	NA	19	True	AATGAA	-33	NA	26008783	26065672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_180_3	ERCC-00143	+	762	1	FSM	ERCC-00143A	DQ668362	767	1	4	1	4	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	4	766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00143_+_0_800
Isoform_180003_47	chr8	+	4058	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	52.4816659369305	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGGCGTGTGAAAAGAG	NA	False	NA	21	True	AATAAA	-24	NA	26008808	26064807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_180006_161	chr8	+	4058	18	FSM	ENSMUSG00000031565.19	ENSMUST00000084027.13	5025	18	34	933	-2	0	multi-exon	FALSE	non_canonical	0	0	junction_9	63.8572694769507	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26008808	26064801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_180008_24	chr8	+	4922	18	FSM	ENSMUSG00000031565.19	ENSMUST00000084027.13	5025	18	34	69	-2	-65	multi-exon	FALSE	non_canonical	0	0	junction_9	63.8572694769507	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGTATCATAGTGGTT	NA	False	NA	12	True	AATGAA	-26	NA	26008808	26065665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_180017_15	chr8	+	2489	6	FSM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	-69	-4	-34	4	multi-exon	FALSE	canonical	3	91	junction_5	11.4960862905599	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCCTGCTGATTTGTT	9651	False	NA	NA	False	ATTAAA	-17	NA	26092265	26153619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756
Isoform_180021_21	chr8	+	3685	10	FSM	ENSMUSG00000054823.18	ENSMUST00000146919.8	3652	10	-34	1	-34	-1	multi-exon	FALSE	canonical	3	19	junction_9	30.118285328204	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCCTTTTTTTTCCC	9651	False	NA	14	True	TTTAAA	-19	NA	26092265	26167987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26166718
Isoform_180023_27	chr8	+	5165	24	FSM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	-34	4974	-34	1	multi-exon	FALSE	canonical	3	27	junction_15	30.6634885068579	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATCAGTGTAAAGCCTAAG	9651	False	NA	NA	False	ATTAAA	-18	NA	26092265	26204720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
Isoform_180024_9	chr8	+	5018	23	FSM	ENSMUSG00000054823.18	ENSMUST00000139966.8	5261	23	-34	277	-34	1	multi-exon	FALSE	canonical	2	6	junction_14	32.1331488683936	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATCAGTGTAAAGCCTAAG	9651	False	NA	NA	False	ATTAAA	-18	NA	26092265	26204720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
Isoform_180025_3	chr8	+	9988	23	FSM	ENSMUSG00000054823.18	ENSMUST00000139966.8	5261	23	-36	-4691	-36	-6	multi-exon	FALSE	canonical	2	6	junction_14	32.1331488683936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGAATATGGGCTGGT	9649	False	NA	13	True	AATAAA	-17	NA	26092263	26209688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
Isoform_180027_14	chr8	+	1430	7	FSM	ENSMUSG00000031570.18	ENSMUST00000124764.8	1419	7	-12	1	-12	-1	multi-exon	FALSE	canonical	3	21	junction_2	20.3141986469235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTGTGTGTGTGAG	NA	False	NA	16	True	AATAAA	-28	NA	26210075	26214913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26210179_26210293_26210363_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
Isoform_180029_3	chr8	+	539	5	ISM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	11	3055	11	46	5prime_fragment	FALSE	canonical	3	39	junction_2	16.7107749670684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	26210074	26211859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688
Isoform_180030_34	chr8	+	1451	7	FSM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	31	1	4	-1	multi-exon	FALSE	canonical	3	39	junction_2	15.9269164205337	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTGTGTGTGTGAG	NA	False	NA	16	True	AATAAA	-28	NA	26210094	26214913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
Isoform_180031_16	chr8	+	2089	6	FSM	ENSMUSG00000031570.18	ENSMUST00000133117.8	2099	6	8	2	8	-2	multi-exon	FALSE	canonical	3	39	junction_2	15.0545674132471	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGTGTGTGTGTGA	NA	False	NA	15	True	AATAAA	-27	NA	26210098	26214912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26212628_26214106
Isoform_180032_242	chr8	+	1193	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	27	1443	27	408	multi-exon	FALSE	canonical	3	365	junction_2	35.9660333586504	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGAGTTTCTGGTGG	8467	False	NA	19	True	AATAAA	-22	NA	26275342	26292560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
Isoform_180035_10	chr8	+	1320	5	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	7	408	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	192.3856803403	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGAGTTTCTGGTGG	8447	False	NA	19	True	AATAAA	-22	NA	26275322	26292560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_26275746_26282184_26282254_26283704_26283821_26286980_26287088_26291955
Isoform_180037_37	chr8	+	3808	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	124	-3	16	3	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609519	26633902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
Isoform_180039_4	chr8	+	1639	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	24	2266	4	280	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGACCTCATTTTCA	NA	False	NA	NA	False	AAGAAA	-11	NA	26609419	26631633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
Isoform_180041_6	chr8	+	3913	8	FSM	ENSMUSG00000013878.19	ENSMUST00000209707.2	1000	8	-6	-2907	-1	3	multi-exon	FALSE	canonical	3	12	junction_1	23.7469654344916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609409	26633902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26609629_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
Isoform_180042_3	chr8	+	3849	7	NIC	ENSMUSG00000013878.19	novel	1000	8	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	31.6999824745833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAATGTGTTATGTTTC	NA	False	NA	8	True	AATAAA	-18	NA	26609397	26633900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_26609629_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26629007_26629119_26630838
Isoform_180044_6	chr8	+	4013	8	NIC	ENSMUSG00000013878.19	novel	741	5	NA	NA	-19	2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	26.1799112890407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATGTGTTATGTTTCT	NA	False	NA	9	True	AATAAA	-19	NA	26609672	26633901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_26609988_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
Isoform_180045_5	chr8	+	3990	8	NIC	ENSMUSG00000013878.19	novel	741	5	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.4226184016042	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTTTAATGTGTTAT	NA	False	NA	3	True	AATAAA	-13	NA	26609684	26633895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_26609988_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
Isoform_180046_93	chr8	+	2222	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	73	0	-19	0	multi-exon	FALSE	canonical	3	177	junction_1	13	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCCCTGCTTTTTT	NA	False	NA	7	True	ATTAAA	-18	NA	26648241	26654179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26648550_26650802_26650999_26652461
Isoform_180048_102	chr8	+	1006	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	75	1214	-17	162	multi-exon	FALSE	canonical	3	177	junction_1	13	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTAATTTTTTTGTTT	NA	False	NA	22	True	AATAAA	-17	NA	26648243	26652965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_26648550_26650802_26650999_26652461
Isoform_180049_6	chr8	+	3361	2	FSM	ENSMUSG00000085795.9	ENSMUST00000154256.3	3152	2	-208	-1	-179	1	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGGTGTGTTTCTCTC	NA	False	NA	6	True	AATAAA	-22	NA	27467173	27471490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27467640_27468595
Isoform_180050_5	chr8	+	3392	2	FSM	ENSMUSG00000085795.9	ENSMUST00000154256.3	3152	2	-239	-1	-210	1	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGGTGTGTTTCTCTC	NA	False	NA	6	True	AATAAA	-22	NA	27467142	27471490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27467640_27468595
Isoform_180051_9	chr8	+	4002	13	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	17	-905	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	118.668627090548	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAGGTAAAATTTACC	NA	False	NA	21	True	AATAAA	-18	NA	27513851	27529451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_27513935_27514861_27514956_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
Isoform_180052_478	chr8	+	3923	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	21	894	13	-894	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTACCAGTAGATTGGA	NA	False	NA	32	True	AATAAA	-29	NA	27513847	27529462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
Isoform_180055_35	chr8	+	4820	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	22	-4	14	4	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCATTGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	27513848	27530360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
Isoform_180062_38	chr8	+	4099	12	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	2	-894	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.8177534496809	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTACCAGTAGATTGGA	NA	False	NA	32	True	AATAAA	-29	NA	27513930	27529462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
Isoform_180064_8	chr8	+	4182	12	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	13	-894	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.8177534496809	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTACCAGTAGATTGGA	NA	False	NA	32	True	AATAAA	-29	NA	27513847	27529462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
Isoform_180071_4	chr8	+	2152	8	NIC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	88.6271713990923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGTGTGATGAGTGAA	NA	False	NA	12	True	ATTAAA	-14	NA	27532591	27544594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535827_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
Isoform_180072_4	chr8	+	1435	5	FSM	ENSMUSG00000031485.16	ENSMUST00000209525.2	5767	5	3	4329	3	-3	multi-exon	FALSE	canonical	3	235	junction_4	15.0416089564913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCAGAGTGTCTTTCA	NA	False	NA	NA	False	CATAAA	-15	NA	27532591	27540266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201
Isoform_180073_302	chr8	+	1988	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	51	1564	8	1	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGATGAGTGAATT	NA	False	NA	14	True	ATTAAA	-16	NA	27532633	27544596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
Isoform_180076_14	chr8	+	2084	8	ISM	ENSMUSG00000031486.16	ENSMUST00000178514.8	5129	16	-106	10410	-106	-8598	5prime_fragment	FALSE	canonical	3	17	junction_4	4.03049599419025	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATTGTGGCAATTAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	27575504	27603053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370
Isoform_18008_10	chr11	-	3955	32	FSM	ENSMUSG00000057948.13	ENSMUST00000106450.8	4046	32	91	0	-35	0	multi-exon	FALSE	canonical	3	18	junction_15	5.60845207266718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTATAGTTGGCTT	NA	False	NA	-1	True	AATAAA	-26	NA	115968485	115952920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
Isoform_180081_374	chr8	+	832	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	5	1160	5	16	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCGCCCACAGCTGGGC	NA	False	NA	16	True	AATAAA	-16	NA	27750361	27765542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27750579_27763350_27763531_27765107
Isoform_180083_9075	chr8	+	789	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	49	1159	49	17	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	9075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27750405	27765543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27750579_27763350_27763531_27765107
Isoform_180084_2544	chr8	+	841	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	41	1115	41	61	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	2544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACGACATGATTACTAT	NA	False	NA	61	True	NA	NA	NA	27750397	27765587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27750579_27763350_27763531_27765107
Isoform_180085_298	chr8	+	919	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	49	1029	49	147	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGTAATCTATCTATCT	NA	False	NA	22	True	AAAAAG	-15	NA	27750405	27765673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27750579_27763350_27763531_27765107
Isoform_18009_7	chr11	-	4083	32	FSM	ENSMUSG00000057948.13	ENSMUST00000106450.8	4046	32	-35	-2	-35	2	multi-exon	TRUE	canonical	3	18	junction_15	5.60845207266718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTATAGTTGGCTTAC	NA	False	NA	1	True	AATAAA	-28	NA	115968611	115952918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
Isoform_180092_11	chr8	+	1752	6	FSM	ENSMUSG00000039328.12	ENSMUST00000217278.2	1726	6	10	-36	9	36	multi-exon	FALSE	canonical	2	5	junction_2	3.55527776692624	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGCTTGTGGTTGTGG	NA	False	NA	13	True	ATTAAA	-27	NA	31601867	31619697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_31602201_31608458_31608616_31614879_31614926_31615193_31615236_31618279_31618363_31618606
Isoform_180094_37	chr8	+	1883	5	ISM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	16	5031	4	-5031	5prime_fragment	FALSE	canonical	3	141	junction_1	15.352117117844	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCGTTTCACTCTCTTC	NA	False	NA	14	True	GATAAA	-26	NA	31640358	31646051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805
Isoform_180096_10	chr8	+	1909	5	ISM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	-8	5029	-8	-5029	5prime_fragment	FALSE	canonical	3	141	junction_1	15.352117117844	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTTTCACTCTCTTCAT	NA	False	NA	16	True	GATAAA	-28	NA	31640334	31646053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805
Isoform_180097_582	chr8	+	2141	7	FSM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	25	967	0	-967	multi-exon	FALSE	canonical	3	124	junction_5	19.2476549798208	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTATCTCTTCTATTT	NA	False	NA	4	True	ATTAAA	-15	NA	31640367	31650115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
Isoform_180100_21	chr8	+	2984	8	FSM	ENSMUSG00000031577.11	ENSMUST00000209986.2	3652	8	0	668	0	-668	multi-exon	FALSE	canonical	2	10	junction_7	52.8432414152019	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTTGTCTTCCCAGTC	NA	False	NA	NA	False	NA	NA	NA	31640367	31652699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
Isoform_180104_4	chr8	+	3055	5	ISM	ENSMUSG00000046152.17	ENSMUST00000161502.2	3527	6	-4	23945	0	-1	5prime_fragment	FALSE	canonical	2	4	junction_2	15.833114033569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACTGTCGCAGACTCT	NA	False	NA	5	True	AATAAA	-15	NA	31677370	31727821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_31677491_31678329_31678435_31684981_31685318_31691237_31691533_31725622
Isoform_180105_7	chr8	+	3051	5	NIC	ENSMUSG00000046152.17	novel	2962	4	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	17.8378109643532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACTGTCGCAGACTCT	NA	False	NA	5	True	AATAAA	-15	NA	31677369	31727821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_31677491_31684981_31685318_31691237_31691533_31715829_31715930_31725622
Isoform_180106_8	chr8	+	3270	7	NNC	ENSMUSG00000046152.17	novel	3527	6	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	17.2980409937722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTATTCTTTGGAGG	NA	False	NA	11	True	AATAAA	-24	NA	31677341	31751512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_31677491_31684981_31685318_31691237_31691533_31715829_31715930_31725622_31726459_31749927_31750940_31750970
Isoform_180107_20	chr8	+	2916	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	44	2	29	-2	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCACTGTCGCAGACTC	NA	False	NA	4	True	AATAAA	-14	NA	31677403	31727820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
Isoform_180108_17	chr8	+	2940	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	19	3	4	-3	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCCACTGTCGCAGACT	NA	False	NA	3	True	AATAAA	-13	NA	31677378	31727819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
Isoform_180109_29	chr8	+	3169	5	FSM	ENSMUSG00000046152.17	ENSMUST00000066173.12	3183	5	15	-1	-1	1	multi-exon	FALSE	canonical	3	13	junction_3	11.5758369027902	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTATTCTTTGGAGG	NA	False	NA	11	True	AATAAA	-24	NA	31677373	31751512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622_31726459_31749927
Isoform_180113_13	chr8	+	2313	4	FSM	ENSMUSG00000046152.17	ENSMUST00000110527.9	2327	4	24	-10	20	2	multi-exon	FALSE	canonical	0	0	junction_3	19.3964487013015	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTATTCTTTGGAGGA	NA	False	NA	12	True	AATAAA	-25	NA	31677394	31751513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31749927
Isoform_180114_6	chr8	+	9384	11	NIC	ENSMUSG00000009628.15	novel	706	6	NA	NA	-2	0	combination_of_known_splicesites	TRUE	canonical	3	10	junction_6	4.61410879802373	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTTTGCCTACATGTT	NA	False	NA	7	True	AATAAA	-41	NA	34006763	34075610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_34006848_34017251_34017328_34029640_34029777_34036214_34036381_34047229_34047468_34053003_34053151_34055070_34055234_34060602_34067607_34068978_34069029_34071539_34072775_34075525
Isoform_180117_620	chr8	+	1849	7	FSM	ENSMUSG00000009630.11	ENSMUST00000009774.11	1469	7	-25	-355	-25	355	multi-exon	FALSE	canonical	3	909	junction_3	33.4398298772919	620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATTTTTTAACTGTG	8840	False	NA	16	True	AATAAA	-16	NA	34089627	34109824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149
Isoform_18012_3	chr11	-	4063	33	NNC	ENSMUSG00000057948.13	novel	3973	33	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_32	7.09801633821028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTATAGTTGGCTTA	NA	False	NA	0	True	AATAAA	-27	NA	115968746	115952919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273_115968485_115968638
Isoform_18013_3	chr11	-	944	6	ISM	ENSMUSG00000057948.13	ENSMUST00000155120.2	991	7	299	31	-38	-31	3prime_fragment	FALSE	canonical	3	26	junction_4	7.60526133673262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	115968488	115966253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
Isoform_180133_2928	chr8	+	2301	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	371	1	371	-1	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	2928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCAGTGTATTTT	773	False	NA	13	True	TATAAA	-16	NA	34143636	34188190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
Isoform_180134_1172	chr8	+	2323	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	349	1	349	-1	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCAGTGTATTTT	751	False	NA	13	True	TATAAA	-16	NA	34143614	34188190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
Isoform_180137_416	chr8	+	2435	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	237	1	237	-1	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCAGTGTATTTT	639	False	NA	13	True	TATAAA	-16	NA	34143502	34188190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
Isoform_180160_98	chr8	+	1549	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	93	-8	93	-1	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCTTTGTTTTAAAAAG	5118	False	NA	17	True	AATAAA	-21	NA	34221953	34267200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_180161_144	chr8	+	1358	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	94	182	94	-182	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTCAGTTTGTCTCTTA	5119	False	NA	35	True	AATAAA	-32	NA	34221954	34267010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_180165_453	chr8	+	1322	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	62	182	-29	-182	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTCAGTTTGTCTCTTA	5296	False	NA	35	True	AATAAA	-32	NA	34222131	34267010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_180166_345	chr8	+	1513	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	50	3	-41	-3	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAATGTTAATGCTTT	5284	False	NA	6	True	AATAAA	-10	NA	34222119	34267189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_180167_34	chr8	+	1608	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	-45	3	-45	-3	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAATGTTAATGCTTT	5189	False	NA	6	True	AATAAA	-10	NA	34222024	34267189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_180169_58	chr8	+	1396	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	-20	190	-20	-190	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTAGGAAATTCAGTTT	5214	False	NA	27	True	AATAAA	-24	NA	34222049	34267002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_180178_409	chr8	+	1829	6	FSM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	69	-1	-49	1	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTTCGTGTGTGGTT	NA	False	NA	34	True	AATAAA	-41	NA	34621785	34638000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
Isoform_18018_1168	chr11	-	1793	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	31	2	8	-2	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTCTGACTCTTGTG	NA	False	NA	-13	True	AGTAAA	-14	NA	115977790	115969400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
Isoform_180181_9	chr8	+	486	4	FSM	ENSMUSG00000100605.2	ENSMUST00000188318.2	418	4	-59	-9	-59	9	multi-exon	FALSE	canonical	3	16	junction_3	5.71547606649408	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTTTTGTTTGATTT	NA	False	NA	NA	False	ATTAAA	-32	NA	34683953	34693308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_34684111_34688020_34688119_34691015_34691123_34693184
Isoform_180182_20	chr8	+	2702	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	39	-1	39	1	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGCCTCCTAAAAGTCT	NA	False	NA	NA	False	AATAAA	-20	NA	35274489	35287049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
Isoform_180184_7	chr8	+	1861	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	-2	881	-2	-881	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGACTTGGTTTCTGTG	NA	False	NA	NA	False	ACTAAA	-39	NA	35274448	35286167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
Isoform_180186_7	chr8	+	4759	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	39	-2058	39	2058	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTTTTGTGGACTCT	NA	False	NA	NA	False	AATAAA	-15	NA	35274489	35289106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
Isoform_180188_16	chr8	+	4183	4	NNC	ENSMUSG00000046794.10	novel	4386	3	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.35702260395516	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAATGAAAACT	NA	False	NA	NA	False	NA	NA	NA	35842865	35855281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_35842960_35851137_35854274_35854304_35855170_35855193
Isoform_180190_3	chr8	+	4114	3	NNC	ENSMUSG00000046794.10	novel	4386	3	NA	NA	-14	-82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	35842878	35855201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_35842960_35851137_35854274_35854304
Isoform_180191_4	chr8	+	4264	3	NNC	ENSMUSG00000046794.10	novel	4349	2	NA	NA	-28	-82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	35842864	35855201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_35843096_35851137_35854274_35854304
Isoform_180193_4	chr8	+	3664	3	NNC	ENSMUSG00000046794.10	novel	4349	2	NA	NA	-26	-680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGTTTCTTGTAAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	35842866	35854603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_35843096_35851137_35854274_35854304
Isoform_180194_5	chr8	+	3594	3	NNC	ENSMUSG00000046794.10	novel	4386	3	NA	NA	-67	-682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATGTTTCTTGTAAG	NA	False	NA	NA	False	AATAAA	-13	NA	35843746	35854601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_35843908_35851137_35854274_35854304
Isoform_180195_13	chr8	+	4202	4	NNC	ENSMUSG00000046794.10	novel	4386	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.2565175405668	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTCCTTCTATT	NA	False	NA	NA	False	NA	NA	NA	35843804	35855293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_35843908_35851137_35854274_35854304_35855170_35855195
Isoform_180196_3	chr8	+	4170	3	NNC	ENSMUSG00000046794.10	novel	4386	3	NA	NA	-43	-82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	35843770	35855201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_35843908_35851137_35854274_35854304
Isoform_180197_6	chr8	+	3939	3	FSM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	44	2425	44	4	multi-exon	FALSE	canonical	1	3	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36054995	36144178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_36058513_36131821_36131949_36143883
Isoform_180198_4	chr8	+	3987	3	FSM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	-9	2430	-9	-1	multi-exon	FALSE	canonical	1	3	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAGAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	36054942	36144173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_36058513_36131821_36131949_36143883
Isoform_180200_26	chr8	+	4960	6	FSM	ENSMUSG00000050271.13	ENSMUST00000110492.2	4780	6	-182	2	-182	-2	multi-exon	FALSE	canonical	3	27	junction_2	3.13687742827162	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAATTTGTTTTTATTGC	NA	False	NA	8	True	AATAAA	-14	NA	36561799	36614939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_36562143_36566723_36567142_36569709_36571506_36596157_36596316_36606505_36607267_36613455
Isoform_180202_4	chr8	+	4766	6	NNC	ENSMUSG00000050271.13	novel	4780	6	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	10.2878569196893	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTTGTTTTTATTGCG	NA	False	NA	9	True	AATAAA	-15	NA	36562013	36614940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_36562143_36566704_36567142_36569709_36571506_36596157_36596316_36606505_36607267_36613455
Isoform_180204_3	chr8	+	1018	4	ISM	ENSMUSG00000039620.18	ENSMUST00000135373.8	2573	7	121	14263	95	-12898	5prime_fragment	FALSE	canonical	2	3	junction_2	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTACTTTGTTGTTAC	NA	False	NA	NA	False	NA	NA	NA	36924822	36965847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_36925046_36925311_36925538_36956197_36956400_36965480
Isoform_180205_6	chr8	+	2456	6	NIC	ENSMUSG00000039620.18	novel	2573	7	NA	NA	56	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	1.6	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTACTTAGACCTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	36924783	36980163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_36925046_36925311_36925538_36956197_36956400_36965480_36965636_36972705_36972880_36978726
Isoform_180206_4	chr8	+	1847	9	NNC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	-4	524	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	77.9098036193135	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTATTGTTTGTTGTTAA	NA	False	NA	NA	False	AATACA	-16	NA	39472994	39618679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_39473355_39513668_39513839_39530344_39530474_39534775_39534917_39538529_39538591_39593693_39593701_39597896_39597972_39610300_39610392_39617866
Isoform_180207_92	chr8	+	1517	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	17	1213	17	-1	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTTTTAGAATTGTG	NA	False	NA	28	True	AATAAA	-18	NA	39473015	39618154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
Isoform_180208_63	chr8	+	1712	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	0	1035	0	177	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGTGTTTTGTTATTC	NA	False	NA	15	True	TATAAA	-15	NA	39472998	39618332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
Isoform_180209_3	chr8	+	1604	9	NIC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	18	178	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	53.444919075624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTGTTATTCT	NA	False	NA	16	True	TATAAA	-16	NA	39473016	39618333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39617866
Isoform_180213_3	chr8	+	799	7	ISM	ENSMUSG00000039478.16	ENSMUST00000068999.14	2219	15	569	27788	569	-18720	5prime_fragment	FALSE	canonical	1	3	junction_2	1.46249406456535	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGAAAAGAGAGAA	8831	False	NA	NA	False	NA	NA	NA	40761067	40809915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_40761452_40788850_40789005_40793338_40793371_40801980_40802060_40805076_40805125_40807343_40807427_40809896
Isoform_180215_90	chr8	+	3393	13	FSM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	-11	-1	-11	1	multi-exon	FALSE	canonical	3	62	junction_3	8.82664841387841	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGTCTCCATCCAGTTA	1209	False	NA	3	True	AATAAA	-27	NA	40876844	40938767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
Isoform_180220_6	chr8	+	1850	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	1	4151	1	63	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCCTCATTTATCAAGA	NA	False	NA	76	True	TTTAAA	-34	NA	40964824	40999647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
Isoform_180221_128	chr8	+	1757	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	33	4212	13	2	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGCTAATTTTTAATA	NA	False	NA	15	True	ATTAAA	-15	NA	40964856	40999586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
Isoform_180222_4	chr8	+	2140	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	-350	4212	-350	2	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGCTAATTTTTAATA	NA	False	NA	15	True	ATTAAA	-15	NA	40964473	40999586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
Isoform_180223_75	chr8	+	5966	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	36	0	16	0	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGGTGTC	NA	False	NA	12	True	NA	NA	NA	40964859	41003798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
Isoform_180228_3	chr8	+	4536	11	NIC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	8	60	intron_retention	FALSE	canonical	3	191	junction_7	13.080137613955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGCCTCATTTATCA	NA	False	NA	73	True	TTTAAA	-31	NA	40964851	40999644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40996995_40997984_40998066_40999316
Isoform_180229_3	chr8	+	1647	11	NIC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	68.5513676012375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTAGCTAATTTTTAA	NA	False	NA	13	True	ATTAAA	-13	NA	40964863	40999584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_40965275_40979967_40980043_40981358_40981474_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
Isoform_180230_3	chr8	+	7692	12	FSM	ENSMUSG00000031596.16	ENSMUST00000098816.10	3677	12	-1	-4014	-1	0	multi-exon	FALSE	canonical	1	1	junction_4	2.4528613751331	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGTTTAGTATGTATAT	NA	False	NA	NA	False	AATAAA	-16	NA	41315431	41375107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_41315595_41351973_41352366_41353092_41353249_41355535_41355702_41357482_41357617_41358541_41358765_41361092_41361233_41364031_41364135_41365516_41365723_41366999_41367167_41367956_41368066_41369374
Isoform_180236_19	chr8	+	6619	38	ISM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-27	954	-1	-954	5prime_fragment	FALSE	canonical	3	93	junction_5	36.5724712558759	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAATGCTTTATGACTTT	NA	False	NA	26	True	AATAAA	-20	NA	41692787	41784175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
Isoform_180237_7	chr8	+	8500	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-24	-1992	2	1740	multi-exon	FALSE	canonical	3	93	junction_5	36.1727924568649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCTGAATTGTATTTTT	NA	False	NA	23	True	AATAAA	-15	NA	41692790	41787121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
Isoform_180239_36	chr8	+	6761	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-27	-250	-1	-2	multi-exon	FALSE	canonical	3	93	junction_5	36.1727924568649	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGCTTTTGGGAAATG	NA	False	NA	6	True	AATAAA	-18	NA	41692787	41785379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
Isoform_18024_51	chr11	-	1632	7	FSM	ENSMUSG00000034341.18	ENSMUST00000106444.4	1012	7	59	-679	36	0	multi-exon	FALSE	canonical	3	34	junction_3	412.44046708451	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTGACTCTTGTGTG	NA	False	NA	-11	True	AGTAAA	-16	NA	115977762	115969398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115972057_115972151_115973101_115973238_115974664_115974774_115977692
Isoform_180240_6	chr8	+	6928	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-196	-248	-170	-4	multi-exon	TRUE	canonical	3	93	junction_5	36.1727924568649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATGCTTTTGGGAAA	NA	False	NA	4	True	AATAAA	-16	NA	41692618	41785377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
Isoform_180241_6	chr8	+	6448	37	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	-951	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	43.1137867869561	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTATGACTTTTTT	NA	False	NA	29	True	AATAAA	-23	NA	41692787	41784178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
Isoform_180242_4	chr8	+	8342	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-12	1742	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	42.5841838011169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGAATTGTATTTTTAT	NA	False	NA	25	True	AATAAA	-17	NA	41692776	41787123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
Isoform_180243_5	chr8	+	6586	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	42.5841838011169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692787	41785378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
Isoform_180247_9	chr8	+	6499	37	ISM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-22	1209	-1	-957	5prime_fragment	FALSE	canonical	3	55	junction_5	37.9212960136916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAATGCTTTATGAC	NA	False	NA	23	True	AATAAA	-17	NA	41692787	41784172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
Isoform_180248_37	chr8	+	6643	38	FSM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-22	3	-1	-3	multi-exon	FALSE	canonical	3	55	junction_5	37.5002702692963	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692787	41785378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
Isoform_180251_4	chr8	+	6483	37	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_22	46.1350674047892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGCTTTTGGGAAATG	NA	False	NA	6	True	AATAAA	-18	NA	41692783	41785379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
Isoform_180254_11	chr8	+	1602	9	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	193.213895398338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTCTCTGCATGTGT	NA	False	NA	23	True	AATAAA	-14	NA	43633573	43646920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_43633650_43635378_43635439_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
Isoform_180255_112	chr8	+	1560	9	FSM	ENSMUSG00000091490.4	ENSMUST00000210136.2	1552	9	-6	-2	-6	2	multi-exon	FALSE	canonical	3	91	junction_2	178.11092049619	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTCTCTGCATGTGT	NA	False	NA	23	True	AATAAA	-14	NA	43633571	43646920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_43633650_43635378_43635395_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
Isoform_18026_20	chr11	-	1107	2	FSM	ENSMUSG00000034341.18	ENSMUST00000129532.2	958	2	9	-158	9	158	multi-exon	FALSE	canonical	3	1218	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115977789	115973763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115974774_115977692
Isoform_180260_9	chr8	+	2486	4	ISM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	-7	6519	-7	-18	5prime_fragment	FALSE	canonical	3	424	junction_1	7.40870359029762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAACCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	43633570	43640382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315
Isoform_180263_562	chr8	+	1544	8	FSM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	-6	-19	-6	2	multi-exon	FALSE	canonical	3	424	junction_1	49.9477277781891	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTCTCTGCATGTGT	NA	False	NA	23	True	AATAAA	-14	NA	43633571	43646920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
Isoform_180265_21	chr8	+	1654	8	FSM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	-116	-19	-116	2	multi-exon	FALSE	canonical	3	424	junction_1	49.9477277781891	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTCTCTGCATGTGT	NA	False	NA	23	True	AATAAA	-14	NA	43633461	43646920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
Isoform_180270_21	chr8	+	3024	7	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-7	1	intron_retention	FALSE	canonical	3	424	junction_1	48.9810053887105	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633570	43646919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_43633650_43636158_43636403_43636739_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
Isoform_180276_3	chr8	+	3960	10	ISM	ENSMUSG00000070047.15	ENSMUST00000189017.8	14651	27	86597	2	-7436	-2	3prime_fragment	FALSE	canonical	3	33	junction_9	13.0979218029257	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTAGCTTTAATGCCTG	NA	False	NA	6	True	AATAAA	-13	NA	45489841	45505280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45502878_45502915_45503817
Isoform_180277_7	chr8	+	1509	12	NIC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	58.4742650182239	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTAGCTGTGATTTAAA	8866	False	NA	4	True	AATAAA	-17	NA	46428570	46449895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_46428626_46432245_46432333_46433351_46433505_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
Isoform_180279_20	chr8	+	1628	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	8	4	2	-4	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTGTAGTCATGTAA	8868	False	NA	100	True	AGTAAA	-15	NA	46428572	46449991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
Isoform_18028_23	chr11	-	1268	3	FSM	ENSMUSG00000020773.12	ENSMUST00000127235.2	692	3	11	-587	11	0	multi-exon	FALSE	canonical	3	127	junction_2	17	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998555	115996577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115997468_115997757_115997830_115998249
Isoform_180280_159	chr8	+	1588	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	0	52	0	46	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTGAATATTCTTTTA	8860	False	NA	52	True	AGTAAA	-19	NA	46428564	46449943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
Isoform_180281_5	chr8	+	1041	9	NIC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	65.648210181238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	8860	False	NA	3	True	AATAAA	-16	NA	46428564	46449894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
Isoform_180282_6	chr8	+	1613	11	FSM	ENSMUSG00000031634.14	ENSMUST00000130412.8	1613	11	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_5	20.5873747719324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	8866	False	NA	3	True	AATAAA	-16	NA	46428570	46449894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_46428626_46432245_46432333_46433351_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
Isoform_180283_4	chr8	+	4653	5	NIC	ENSMUSG00000031631.16	novel	4521	4	NA	NA	5	-1	intron_retention	FALSE	canonical	2	6	junction_1	21.868927728629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTTGATTCTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	46604812	46648622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_46604951_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_180285_19	chr8	+	4718	6	NIC	ENSMUSG00000031631.16	novel	4619	5	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	9	junction_1	20.9990475974507	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTTGATTCTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	46616718	46648622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_46616787_46617798_46617934_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_180289_53	chr8	+	4556	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	58	5	-6	-1	multi-exon	FALSE	canonical	3	40	junction_1	7.58287544405155	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTTGATTCTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	46616745	46648622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_180290_6	chr8	+	4665	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	-51	5	-51	-1	multi-exon	FALSE	canonical	3	40	junction_1	7.58287544405155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTTGATTCTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	46616636	46648622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_180291_11	chr8	+	4493	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	35	91	-6	-87	multi-exon	FALSE	canonical	3	40	junction_1	7.58287544405155	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTTAAAAAATGTCCT	NA	False	NA	-73	True	AATAAA	-24	NA	46616722	46648536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_180294_3	chr8	+	4613	5	ISM	ENSMUSG00000031631.16	ENSMUST00000110376.8	2043	6	35	-3	35	1	intron_retention	FALSE	canonical	2	6	junction_1	21.868927728629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGATTCTGTTTTGTT	NA	False	NA	17	True	AATAAA	-18	NA	46616806	46648626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_46616901_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_180295_3	chr8	+	4584	5	ISM	ENSMUSG00000031631.16	ENSMUST00000110376.8	2043	6	-27	88	-7	-88	intron_retention	FALSE	canonical	2	6	junction_1	21.868927728629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTTTTAAAAAATGTCC	NA	False	NA	-74	True	AATAAA	-23	NA	46616744	46648535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_46616901_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_18030_108	chr11	-	1463	4	FSM	ENSMUSG00000020773.12	ENSMUST00000141531.8	1503	4	34	6	34	-6	multi-exon	FALSE	canonical	3	121	junction_3	17.6131264181639	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	115998911	115996583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603
Isoform_180304_49	chr8	+	3708	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	91.7312944718842	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGAATGTCTTTCAAG	2348	False	NA	11	True	AATAAA	-20	NA	46924215	46989082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
Isoform_180305_6	chr8	+	3382	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	9	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	91.7312944718842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGATTTATGTGAAATG	2215	False	NA	NA	False	ATTAAA	-37	NA	46924082	46988623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
Isoform_180307_19	chr8	+	3611	21	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	121.60652737415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGAGAATGTCTTTC	2215	False	NA	8	True	AATAAA	-17	NA	46924082	46989079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_46924268_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
Isoform_180309_14	chr8	+	3764	22	NNC	ENSMUSG00000018796.14	novel	3429	21	NA	NA	-28	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	120.72949091802	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	9479	False	NA	6	True	AATAAA	-15	NA	46943974	46989077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_46944088_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
Isoform_180313_5	chr8	+	3560	20	ISM	ENSMUSG00000018796.14	ENSMUST00000110372.9	3429	21	1967	-460	101	-10	3prime_fragment	FALSE	canonical	3	339	junction_8	34.2613387826579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	NA	False	NA	7	True	AATAAA	-16	NA	46945969	46989078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
Isoform_180322_13	chr8	+	1629	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	14	1367	0	262	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAATGATCCTGGTTAA	NA	False	NA	12	True	AATAAA	-28	NA	47005103	47031675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_180323_11	chr8	+	2739	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	-25	296	2	-296	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGCAGTGTTAACAGT	NA	False	NA	NA	False	AATAAA	-15	NA	47005064	47032746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_180326_9	chr8	+	1504	13	NIC	ENSMUSG00000031629.15	novel	2931	13	NA	NA	1	259	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	79.2867510299728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATAGAATGATCCTGGT	NA	False	NA	9	True	AATAAA	-25	NA	47005104	47031672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014859_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_18033_54	chr11	-	2198	6	FSM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	-12	6	-3	-6	multi-exon	FALSE	canonical	3	60	junction_4	39.5777715390849	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	116001075	115996583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603_115998835_115999091_115999188_116000359
Isoform_180330_18	chr8	+	960	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	31	6	0	-6	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATGACTCCTTTTATT	NA	False	NA	15	True	NA	NA	NA	47005103	47016028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
Isoform_180333_181	chr8	+	1520	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	42	1369	1	260	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAGAATGATCCTGGTT	NA	False	NA	10	True	AATAAA	-26	NA	47005104	47031673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_180338_25	chr8	+	2594	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	42	295	1	-295	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAGTGTTAACAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	47005104	47032747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_180339_11	chr8	+	2914	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	39	-22	-2	22	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTATGTCAGAGTCTGC	NA	False	NA	NA	False	ATTAAA	-37	NA	47005101	47033064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_18034_16	chr11	-	2222	6	FSM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	-36	6	-27	-6	multi-exon	FALSE	canonical	3	60	junction_4	39.5777715390849	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	116001099	115996583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603_115998835_115999091_115999188_116000359
Isoform_180340_5	chr8	+	4078	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	-1	-1146	-1	1146	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAAAATTGTGTATTC	NA	False	NA	NA	False	ATTAAA	-28	NA	47005061	47034188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_180341_75	chr8	+	2444	7	FSM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	42	-966	-5	-6	multi-exon	FALSE	canonical	3	47	junction_1	80.3189821205977	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCAGTGTATTTGAG	NA	False	NA	15	True	CATAAA	-11	NA	47070471	47092718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
Isoform_180342_53	chr8	+	2472	7	FSM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	14	-966	2	-6	multi-exon	FALSE	canonical	3	47	junction_1	80.3189821205977	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCAGTGTATTTGAG	NA	False	NA	15	True	CATAAA	-11	NA	47070443	47092718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
Isoform_180346_254	chr8	+	2481	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	114	6	-2	-6	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCAGTGTATTTGAG	NA	False	NA	15	True	CATAAA	-11	NA	47070439	47092718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
Isoform_180347_259	chr8	+	2449	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	146	6	-5	-6	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCAGTGTATTTGAG	NA	False	NA	15	True	CATAAA	-11	NA	47070471	47092718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
Isoform_180358_160	chr8	+	2935	7	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_6	72.1795600491503	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTATATGTTTTGT	NA	False	NA	7	True	AATAAA	-17	NA	47986681	48005860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003729
Isoform_180364_10	chr8	+	2896	7	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_6	82.951793229562	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTATATGTTTTGT	NA	False	NA	7	True	AATAAA	-17	NA	47986716	48005860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_47986979_47990313_47990395_47995730_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003729
Isoform_180372_213	chr8	+	2064	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	31	1	-24	1	multi-exon	FALSE	canonical	3	319	junction_1	42.4480859403578	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563023	48594699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_180373_390	chr8	+	1872	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	223	1	-8	1	multi-exon	FALSE	canonical	3	319	junction_1	42.4480859403578	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563215	48594699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_180374_117	chr8	+	2093	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	2	1	2	1	multi-exon	TRUE	canonical	3	319	junction_1	42.4480859403578	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48562994	48594699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_18038_7	chr11	-	1292	3	ISM	ENSMUSG00000020773.12	ENSMUST00000134691.2	782	4	279	-634	-16	-6	3prime_fragment	FALSE	canonical	3	54	junction_2	53.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	115998582	115996583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_115997468_115997757_115997833_115998249
Isoform_180383_32	chr8	+	2332	6	NIC	ENSMUSG00000031562.17	novel	2072	6	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	132.43775896624	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563023	48594699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_180385_87	chr8	+	2135	6	NIC	ENSMUSG00000031562.17	novel	2072	6	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	132.43775896624	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563220	48594699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_180386_43	chr8	+	1893	7	NNC	ENSMUSG00000031562.17	novel	1126	5	NA	NA	193	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	167.429587190158	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563438	48594699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377_48594014_48594037
Isoform_18039_30	chr11	-	1418	4	FSM	ENSMUSG00000020773.12	ENSMUST00000134691.2	782	4	-2	-634	-2	-6	multi-exon	FALSE	canonical	3	54	junction_2	44.1437047229462	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	115998863	115996583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603
Isoform_180395_48	chr8	+	2255	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	1	42640	1	-42640	5prime_fragment	FALSE	canonical	3	54	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGTTTCTCGTGAGTGA	NA	False	NA	22	True	NA	NA	NA	52809646	52813734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_52809842_52811674
Isoform_1804_32	chr10	-	1393	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	12	127	12	-127	multi-exon	FALSE	canonical	3	2101	junction_1	71	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGTAAGTTTTCA	NA	False	NA	-11	True	NA	NA	NA	30076544	30072131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30073223_30074461_30074576_30076356
Isoform_18040_21	chr11	-	1470	4	FSM	ENSMUSG00000020773.12	ENSMUST00000134691.2	782	4	-54	-634	30	-6	multi-exon	FALSE	canonical	3	54	junction_2	44.1437047229462	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	115998915	115996583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603
Isoform_180400_5	chr8	+	2490	3	NNC	ENSMUSG00000110013.2	novel	763	4	NA	NA	2	-42378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAACTGCTTGATTTATC	NA	False	NA	NA	False	AATAAA	-29	NA	52809647	52813996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_52809842_52811674_52813740_52813765
Isoform_180401_4	chr8	+	1251	9	NIC	ENSMUSG00000031521.6	novel	1181	9	NA	NA	-8	1	combination_of_known_splicesites	TRUE	canonical	3	23	junction_6	114.178314490975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCTACTTCCTTA	NA	False	NA	23	True	AATAAA	-17	NA	53964753	53976457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972005_53973271_53973380_53974084_53974219_53976210
Isoform_180402_9	chr8	+	1174	9	NIC	ENSMUSG00000031521.6	novel	1181	9	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	3	23	junction_6	114.178314490975	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTTTGTCTACTTCC	NA	False	NA	20	True	AATAAA	-14	NA	53964827	53976454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972005_53973271_53973380_53974084_53974219_53976210
Isoform_180403_211	chr8	+	1206	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	59	-84	-12	1	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCTACTTCCTTA	NA	False	NA	23	True	AATAAA	-17	NA	53964820	53976457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
Isoform_180404_138	chr8	+	1274	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	-9	-84	-9	1	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCTACTTCCTTA	NA	False	NA	23	True	AATAAA	-17	NA	53964752	53976457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
Isoform_180406_5	chr8	+	1657	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	-8	-468	-8	385	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGTGTTGAGTTGTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	53964753	53976841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
Isoform_180408_44	chr8	+	2178	7	FSM	ENSMUSG00000031520.7	ENSMUST00000033919.6	2449	7	-377	648	-377	-648	multi-exon	FALSE	canonical	3	36	junction_4	8.69386757049665	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATGAAGTTCAGTCT	644	False	NA	NA	False	AATAAA	-16	NA	54530263	54639483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_54530961_54609992_54610195_54612327_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
Isoform_180412_40	chr8	+	2264	7	FSM	ENSMUSG00000031520.7	ENSMUST00000033919.6	2449	7	-461	646	-461	-646	multi-exon	FALSE	canonical	3	36	junction_4	8.69386757049665	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATGAAGTTCAGTCTTT	560	False	NA	NA	False	AATAAA	-18	NA	54530179	54639485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_54530961_54609992_54610195_54612327_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
Isoform_180419_20	chr8	+	1683	7	FSM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	1	-1	1	1	multi-exon	FALSE	canonical	3	14	junction_2	3.18416219575713	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATTGCCTATTCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	56747620	56774079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
Isoform_180421_19	chr8	+	2000	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	19	1552	0	-6	multi-exon	TRUE	canonical	3	53	junction_4	8.56504524214554	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTCAGTGTTAACTA	NA	False	NA	NA	False	AATAAA	-42	NA	57004143	57045422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
Isoform_180424_7	chr8	+	459	3	FSM	ENSMUSG00000096917.3	ENSMUST00000180690.2	2618	3	13	2146	13	0	multi-exon	FALSE	canonical	3	58	junction_1	45.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTCCTGCTTCTTTCAA	NA	False	NA	9	True	NA	NA	NA	57941100	57959765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_57941228_57943373_57943502_57959561
Isoform_180425_5	chr8	+	726	4	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	-8	1386	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	50.4799189997589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTCTATTGGTTTTGT	NA	False	NA	15	True	NA	NA	NA	57941079	57963297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_57941228_57943373_57943502_57959561_57959836_57963121
Isoform_180426_4	chr8	+	3907	2	ISM	ENSMUSG00000096917.3	ENSMUST00000180690.2	2618	3	2242	-1385	2242	1385	3prime_fragment	FALSE	canonical	3	149	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTCTATTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	57943329	57963296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_57943502_57959561
Isoform_180429_6	chr8	+	579	3	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	2286	1387	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	59	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTATTGGTTTTGTT	NA	False	NA	16	True	NA	NA	NA	57943373	57963298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_57943502_57959561_57959836_57963121
Isoform_180436_3379	chr8	+	1084	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	33	1511	33	1279	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	3379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCATTGTGTTTGTATT	NA	False	NA	3	True	AATAAA	-14	NA	57964973	57967522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
Isoform_18044_40	chr11	-	2197	6	FSM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	1	6	1	-6	multi-exon	FALSE	canonical	3	54	junction_2	42.4951761968344	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	116001071	115996583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603_115998835_115999091_115999188_116000359
Isoform_180441_648	chr8	+	1156	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	-40	1512	-40	1278	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCATTGTGTTTGTAT	NA	False	NA	2	True	AATAAA	-13	NA	57964900	57967521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
Isoform_180450_950	chr8	+	1118	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-6	1278	at_least_one_novel_splicesite	FALSE	canonical	3	1278	junction_1	2424.68941310016	950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCATTGTGTTTGTAT	NA	False	NA	2	True	AATAAA	-13	NA	57964934	57967521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_57965040_57965612_57965783_57966095_57966242_57966323_57966499_57966999
Isoform_180454_197	chr8	+	1182	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-63	1285	at_least_one_novel_splicesite	FALSE	canonical	3	1278	junction_1	2424.68941310016	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTGTATTAATTTT	NA	False	NA	9	True	AATAAA	-20	NA	57964877	57967528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_57965040_57965612_57965783_57966095_57966242_57966323_57966499_57966999
Isoform_180476_25	chr8	+	2818	7	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	-12	1	-6	-1	intron_retention	FALSE	canonical	3	724	junction_4	83.6827673751027	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	21	True	AATAAA	-34	NA	61343472	61360613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581
Isoform_180478_791	chr8	+	1203	8	FSM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	-12	0	-6	0	multi-exon	FALSE	canonical	3	724	junction_4	79.3373062516324	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343472	61360614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
Isoform_180479_10	chr8	+	1271	9	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	365.929211050443	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343471	61360614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61359405_61359473_61360370
Isoform_180480_13	chr8	+	1915	8	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	299.186720757374	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTTCTAGTGTTTCTTT	NA	False	NA	20	True	AATAAA	-33	NA	61343476	61360612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61359473_61360370
Isoform_180483_16	chr8	+	1001	7	FSM	ENSMUSG00000038005.16	ENSMUST00000149267.8	1000	7	6	-7	0	0	multi-exon	FALSE	canonical	3	27	junction_2	318.3514829032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343484	61360614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_61343571_61346734_61346895_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
Isoform_180486_13	chr8	+	796	5	NIC	ENSMUSG00000038005.16	novel	1000	7	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	382.667610335654	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	21	True	AATAAA	-34	NA	61343429	61360613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_61343571_61353117_61353269_61357033_61357122_61358581_61358755_61360370
Isoform_180487_24	chr8	+	599	4	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	388.477655585091	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343476	61360614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_61343571_61357033_61357122_61358581_61358755_61360370
Isoform_180494_7	chr8	+	5111	34	NIC	ENSMUSG00000031644.20	novel	5401	33	NA	NA	1	3	combination_of_known_junctions	TRUE	canonical	3	4	junction_1	16.5039439313534	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATATCAGTTGTCCT	NA	False	NA	5	True	NA	NA	NA	61446229	61584376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_61446391_61446675_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
Isoform_180497_10	chr8	+	5608	35	FSM	ENSMUSG00000031644.20	ENSMUST00000211672.2	5109	35	-67	-432	-2	1	multi-exon	FALSE	canonical	3	7	junction_18	18.7248331678183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGTATATCAGTTGTC	NA	False	NA	3	True	NA	NA	NA	61446231	61584374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61524784_61524869_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
Isoform_180498_31	chr8	+	5517	34	NIC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	11	0	intron_retention	FALSE	canonical	3	24	junction_17	14.9073046478596	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTTGTCCTTATT	NA	False	NA	9	True	NA	NA	NA	61446244	61584380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
Isoform_180499_8	chr8	+	5436	34	FSM	ENSMUSG00000031644.20	ENSMUST00000120689.8	5478	34	48	-6	2	-1	multi-exon	FALSE	canonical	3	7	junction_17	17.7121147315746	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATCAGTTGTCCTTAT	NA	False	NA	8	True	NA	NA	NA	61446276	61584379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61524784_61524869_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
Isoform_180501_54	chr8	+	5403	33	FSM	ENSMUSG00000031644.20	ENSMUST00000034065.14	5401	33	1	-3	1	3	multi-exon	FALSE	canonical	3	31	junction_16	13.1719028024618	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTTGTCCTTATTGAC	NA	False	NA	12	True	NA	NA	NA	61446229	61584383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
Isoform_180504_3	chr8	+	2478	5	ISM	ENSMUSG00000031642.10	ENSMUST00000209611.2	4416	11	-60	35786	-60	-13733	5prime_fragment	FALSE	canonical	3	51	junction_3	6.25999201277446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGGAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	61677217	61803889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433
Isoform_180507_95	chr8	+	5182	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	298	-1	-74	1	multi-exon	FALSE	canonical	3	41	junction_9	7.49876022810956	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCCTTTTTTTTTTAA	NA	False	NA	8	True	ATTAAA	-19	NA	61677203	61849106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
Isoform_180508_3	chr8	+	5431	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	47	1	47	-1	multi-exon	FALSE	canonical	3	41	junction_9	7.49876022810956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCCCTTTTTTTTTT	NA	False	NA	6	True	ATTAAA	-17	NA	61676952	61849104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
Isoform_180512_97	chr8	+	1089	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	8	3212	7	93	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTGTTGCTAAGAGTAT	2574	False	NA	14	True	ATTAAA	-14	NA	61940775	61956516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
Isoform_180516_4	chr8	+	3729	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	1	579	0	-579	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGGATTCATGCTGTTT	2567	False	NA	NA	False	NA	NA	NA	61940768	61959149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
Isoform_180517_23	chr8	+	2392	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	39	-1309	5	1309	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTATTCCTATGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	65399875	65422994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
Isoform_180518_217	chr8	+	1121	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	0	1	0	1	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTTTTGTATGTTGTG	NA	False	NA	24	True	TATAAA	-16	NA	65399836	65421684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
Isoform_180519_309	chr8	+	1082	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	39	1	5	1	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTTTTGTATGTTGTG	NA	False	NA	24	True	TATAAA	-16	NA	65399875	65421684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
Isoform_180521_6	chr8	+	2429	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	5	-1312	5	1312	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATTCCTATGTGGCA	NA	False	NA	NA	False	ATTAAA	-23	NA	65399841	65422997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
Isoform_180527_8	chr8	+	2775	2	FSM	ENSMUSG00000025519.6	ENSMUST00000183187.2	5485	2	-47	2757	-44	1802	multi-exon	FALSE	canonical	3	13	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTGTTTTTCATGAA	NA	False	NA	NA	False	CATAAA	-13	NA	66964363	66968230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_66966353_66967444
Isoform_180529_5	chr8	+	6382	2	FSM	ENSMUSG00000025519.6	ENSMUST00000183187.2	5485	2	-31	-866	-28	866	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAGAGGTGACTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	66964379	66971853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_66966353_66967444
Isoform_18053_227	chr11	-	1399	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	8	4	5	0	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	415	False	NA	-6	True	AATAAA	-16	NA	116029686	116022646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
Isoform_180531_44	chr8	+	2939	8	FSM	ENSMUSG00000014907.11	ENSMUST00000118009.2	2990	8	45	6	45	-6	multi-exon	FALSE	canonical	3	67	junction_6	3.64215679542342	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAATTTAGAGTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	67312913	67343210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67336094_67336256_67338416_67338469_67340424_67340528_67341712
Isoform_180533_4	chr8	+	1375	2	FSM	ENSMUSG00000051147.11	ENSMUST00000093470.7	1396	2	12	9	12	5	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTCATTTTCAAAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	67947521	67955227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_67947555_67953885
Isoform_180534_34	chr8	+	2606	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	117	-5	117	0	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	22	True	NA	NA	NA	68729335	68800351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
Isoform_180535_35	chr8	+	2568	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	153	-3	153	-2	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	20	True	NA	NA	NA	68729371	68800349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
Isoform_180536_14	chr8	+	2777	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	-56	-3	-56	-2	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	20	True	NA	NA	NA	68729162	68800349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
Isoform_18054_1282	chr11	-	1345	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	62	4	-17	0	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	469	False	NA	-6	True	AATAAA	-16	NA	116029632	116022646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
Isoform_180546_42	chr8	+	3350	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	40	811	-5	-809	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTATTGTCCATATTCCA	NA	False	NA	NA	False	AATAAA	-18	NA	69246620	69281251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
Isoform_180554_5	chr8	+	2456	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	134	1525	-32	-1525	multi-exon	TRUE	canonical	3	87	junction_5	14.4871164560059	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGAGGGAGGGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	69333276	69358061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
Isoform_180563_3493	chr8	+	2707	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	121	-3	-1	3	multi-exon	FALSE	canonical	3	1214	junction_12	88.1479391228044	3493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGACTCTGTGTTTTCT	NA	False	NA	21	True	AATAAA	-25	NA	69541418	69566366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
Isoform_180564_53	chr8	+	2787	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	33	5	33	-5	multi-exon	TRUE	canonical	3	1214	junction_12	88.1479391228044	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACCTGAAATGACTCTG	NA	False	NA	13	True	AATAAA	-17	NA	69541330	69566358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
Isoform_180565_248	chr8	+	2747	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	78	0	-44	0	multi-exon	FALSE	canonical	3	1214	junction_12	88.1479391228044	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	False	NA	18	True	AATAAA	-22	NA	69541375	69566363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
Isoform_18057_20	chr11	-	1416	8	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-14	0	intron_retention	FALSE	canonical	3	763	junction_7	35.5883493891596	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	472	False	NA	-6	True	AATAAA	-16	NA	116029629	116022646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116026152_116029267_116029448_116029536
Isoform_180583_5	chr8	+	555	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	1	2445	1	-3	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCATAAAAGAACACACA	7201	False	NA	NA	False	NA	NA	NA	69661690	69680743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
Isoform_180585_69	chr8	+	2976	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	25	0	15	0	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGACCCTTGTCCTGTA	7225	False	NA	27	True	AATAAA	-18	NA	69661714	69683188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
Isoform_180589_573	chr8	+	3835	26	FSM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	76	4	-11	0	multi-exon	FALSE	canonical	3	203	junction_10	47.3625337160081	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGCTGCCACTTAT	9240	False	NA	NA	False	AATAAA	-19	NA	70243888	70260395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
Isoform_180592_25	chr8	+	3765	26	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_13	62.842609748482	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGCTGCCACTTAT	9240	False	NA	NA	False	AATAAA	-19	NA	70243888	70260395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
Isoform_180594_27	chr8	+	3904	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-1	intron_retention	TRUE	canonical	3	223	junction_12	42.3897262186121	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9240	False	NA	NA	False	AATAAA	-18	NA	70243888	70260394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
Isoform_180595_70	chr8	+	3834	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	87	junction_12	60.2107410129898	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9240	False	NA	NA	False	AATAAA	-18	NA	70243888	70260394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
Isoform_1806_376	chr10	-	436	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	12	1084	12	-1084	multi-exon	FALSE	canonical	3	2101	junction_1	71	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTTCTGAGTTTCTT	NA	False	NA	-2	True	ATTAAA	-27	NA	30076544	30073088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30073223_30074461_30074576_30076356
Isoform_180610_4	chr8	+	1546	2	FSM	ENSMUSG00000031861.17	ENSMUST00000238452.2	1350	2	22	-218	22	218	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCTGGTTGTTATTTTT	511	False	NA	NA	False	ATTAAA	-13	NA	70275255	70277643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70275362_70276203
Isoform_180611_24	chr8	+	2666	4	NNC	ENSMUSG00000031861.17	novel	5800	4	NA	NA	21	-2974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.48528137423857	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAAACGTCTCTTTCTTT	510	False	NA	NA	False	ATTAAA	-19	NA	70275254	70280777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_70275362_70276203_70276946_70278940_70280541_70280560
Isoform_180613_4	chr8	+	1140	7	NIC	ENSMUSG00000031860.18	novel	1560	8	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	12.3659478676997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTGTTTTCAATACA	2253	False	NA	4	True	ATTAAA	-17	NA	70285320	70324941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70285502_70311729_70311804_70317473_70317665_70319117_70319254_70322678_70322833_70323227_70323335_70324644
Isoform_180615_3	chr8	+	961	6	FSM	ENSMUSG00000031860.18	ENSMUST00000134777.10	931	6	-30	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	11.2178429299041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2242	False	NA	5	True	ATTAAA	-18	NA	70285309	70324942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70285502_70311729_70311804_70319117_70319254_70322678_70322833_70323227_70323335_70324644
Isoform_180616_3	chr8	+	814	5	NIC	ENSMUSG00000031860.18	novel	931	6	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	14.9059551857638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAGTGTTTTCAATA	2232	False	NA	2	True	ATTAAA	-15	NA	70285299	70324939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70285502_70311729_70311804_70319117_70319254_70323227_70323335_70324644
Isoform_180617_11	chr8	+	670	4	NIC	ENSMUSG00000031860.18	novel	823	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	13.4246870437348	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2243	False	NA	5	True	ATTAAA	-18	NA	70285310	70324942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70285502_70311729_70311804_70323227_70323335_70324644
Isoform_180625_157	chr8	+	2329	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	-26	378	-26	-378	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTGCTGTTGCCAGAAA	2131	False	NA	25	True	ATTAAA	-30	NA	70495436	70524619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
Isoform_180626_644	chr8	+	2057	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	232	392	-4	-392	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCATTCCAGTTCCT	2389	False	NA	11	True	ATTAAA	-16	NA	70495694	70524605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
Isoform_180627_41	chr8	+	2464	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	217	0	-4	0	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGCTCCTCTGGTCTTC	2374	False	NA	NA	False	GATAAA	-14	NA	70495679	70524997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
Isoform_180639_9	chr8	+	3232	5	FSM	ENSMUSG00000007594.11	ENSMUST00000007738.11	3648	5	49	367	9	-367	multi-exon	FALSE	canonical	1	2	junction_2	1.08972473588517	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAAGGCTGCCAGTCC	1138	False	NA	NA	False	AATAAA	-23	NA	70536155	70543145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70536214_70537069_70537191_70537431_70537795_70539457_70539782_70540779
Isoform_180640_4	chr8	+	565	2	ISM	ENSMUSG00000071078.7	ENSMUST00000211898.2	1078	4	-21	1554	-21	-1545	5prime_fragment	FALSE	canonical	3	606	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCACACGCCTTTAATC	426	False	NA	NA	False	NA	NA	NA	70583961	70584844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70584250_70584567
Isoform_180641_10	chr8	+	2088	2	ISM	ENSMUSG00000071078.7	ENSMUST00000211898.2	1078	4	1	9	1	0	intron_retention	FALSE	canonical	3	606	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	448	False	NA	9	True	NA	NA	NA	70583983	70586389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70584250_70584567
Isoform_180642_3	chr8	+	1662	3	ISM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	11	-1	11	1	intron_retention	FALSE	canonical	3	581	junction_2	12.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACCAAACACCCCAT	472	False	NA	10	True	NA	NA	NA	70584007	70586390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70584250_70584567_70584659_70585061
Isoform_180643_6	chr8	+	1621	4	ISM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	-17	-1	-3	1	intron_retention	FALSE	canonical	3	525	junction_3	33.8657480190367	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACCAAACACCCCAT	444	False	NA	10	True	NA	NA	NA	70583979	70586390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236
Isoform_180645_79	chr8	+	763	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	7	-14	1	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTTTGACCAGTCTG	8828	False	NA	25	True	AATAAA	-25	NA	70592363	70598199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
Isoform_180646_9	chr8	+	1036	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	-266	-14	-58	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTTTGACCAGTCTG	8555	False	NA	25	True	AATAAA	-25	NA	70592090	70598199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
Isoform_180647_22	chr8	+	1970	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	215	-1375	1	1312	multi-exon	FALSE	canonical	3	86	junction_5	44.6183818621877	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACAGTGGTCTGTGGTGC	8828	False	NA	25	True	ATTAAA	-35	NA	70592363	70601281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
Isoform_180648_40	chr8	+	598	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	215	-3	1	-2	multi-exon	FALSE	canonical	3	86	junction_5	44.6183818621877	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTCTCTTTCCATGCTG	8828	False	NA	20	True	AATACA	-14	NA	70592363	70599909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
Isoform_180650_4	chr8	+	2278	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	-92	-1376	-92	1313	multi-exon	TRUE	canonical	3	86	junction_5	44.6183818621877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGGTCTGTGGTGCC	8521	False	NA	26	True	ATTAAA	-36	NA	70592056	70601282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
Isoform_180651_6	chr8	+	1673	13	NIC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	3	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_5	71.7291878448996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8828	False	NA	5	True	NA	NA	NA	70592363	70620138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
Isoform_180652_8	chr8	+	1703	13	NIC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	72.9206189405073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8828	False	NA	5	True	NA	NA	NA	70592363	70620138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
Isoform_180653_3	chr8	+	849	6	NNC	ENSMUSG00000002345.19	novel	810	6	NA	NA	1	2623	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	73.422067527413	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGCTCAGGATTGTTA	8828	False	NA	NA	False	NA	NA	NA	70592363	70602592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70602171
Isoform_180656_145	chr8	+	1329	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110143.8	1312	9	-17	0	-17	0	multi-exon	FALSE	canonical	3	113	junction_6	45.467021015237	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8572	False	NA	5	True	NA	NA	NA	70605410	70620138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
Isoform_180658_142	chr8	+	1357	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110146.9	1342	9	-15	0	-15	0	multi-exon	FALSE	canonical	3	100	junction_6	49.3303595669036	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8574	False	NA	5	True	NA	NA	NA	70605412	70620138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
Isoform_180659_21	chr8	+	1401	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110146.9	1342	9	-59	0	-59	0	multi-exon	FALSE	canonical	3	100	junction_6	49.3303595669036	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8530	False	NA	5	True	NA	NA	NA	70605368	70620138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
Isoform_180662_154	chr8	+	2172	12	FSM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	15	831	1	0	multi-exon	FALSE	canonical	3	91	junction_1	38.6768771547844	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	5881	False	NA	7	True	AATAAA	-17	NA	70625069	70635500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_180669_44	chr8	+	2102	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	0	-22	0	-3	multi-exon	FALSE	canonical	3	25	junction_1	59.2504008425259	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGTCTGGCCCAGTCA	5869	False	NA	29	True	AATAAA	-39	NA	70625057	70635522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_180672_177	chr8	+	2153	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1897	830	-1	1	3prime_fragment	FALSE	canonical	3	184	junction_1	15.5935884260166	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCCTTACCATGGTGC	7763	False	NA	8	True	AATAAA	-18	NA	70626951	70635501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_180673_15	chr8	+	2981	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1897	2	-1	-2	3prime_fragment	FALSE	canonical	3	184	junction_1	15.5935884260166	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTGGATCCTTATCTT	7763	False	NA	NA	False	AATAAA	-42	NA	70626951	70636329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_180681_5	chr8	+	2639	3	ISM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	-424	10215	-27	1645	5prime_fragment	FALSE	canonical	3	101	junction_1	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1065	False	NA	NA	False	NA	NA	NA	70686848	70697198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70687303_70689317_70689445_70695140
Isoform_180682_21	chr8	+	2264	3	ISM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	-47	10213	-41	1647	5prime_fragment	FALSE	canonical	3	101	junction_1	11.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1442	False	NA	NA	False	NA	NA	NA	70687225	70697200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70687303_70689317_70689445_70695140
Isoform_180683_12	chr8	+	3555	6	FSM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	-36	-2	-30	2	multi-exon	FALSE	canonical	3	101	junction_1	8.51821577561874	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTATGTACACAGCGTT	1453	False	NA	NA	False	AATAAA	-20	NA	70687236	70707415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228
Isoform_180684_3	chr8	+	3993	7	ISM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	-10	2771	-10	1	5prime_fragment	FALSE	canonical	3	99	junction_6	10.077477638554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGAGCTCT	1082	False	NA	NA	False	NA	NA	NA	70686865	70710921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779
Isoform_180685_13	chr8	+	3629	7	ISM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	354	2771	-37	1	5prime_fragment	FALSE	canonical	3	99	junction_6	10.077477638554	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGAGCTCT	1446	False	NA	NA	False	NA	NA	NA	70687229	70710921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779
Isoform_180688_109	chr8	+	3590	12	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_10	11.7353742277127	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1470	False	NA	26	True	AATAAA	-17	NA	70687253	70715755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
Isoform_180689_14	chr8	+	3988	12	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_10	11.7353742277127	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1072	False	NA	26	True	AATAAA	-17	NA	70686855	70715755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
Isoform_180691_7	chr8	+	3531	11	FSM	ENSMUSG00000036054.16	ENSMUST00000093458.11	3874	11	343	0	-41	0	multi-exon	FALSE	canonical	1	3	junction_10	33.7467035427166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1442	False	NA	26	True	AATAAA	-17	NA	70687225	70715755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70715520
Isoform_180692_3	chr8	+	3896	11	FSM	ENSMUSG00000036054.16	ENSMUST00000093458.11	3874	11	-23	1	-16	-1	multi-exon	FALSE	canonical	1	3	junction_10	33.7467035427166	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGCTCCTGTGCTGC	1076	False	NA	25	True	AATAAA	-16	NA	70686859	70715754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70715520
Isoform_180694_27	chr8	+	4238	11	FSM	ENSMUSG00000036054.16	ENSMUST00000131489.8	4609	11	371	0	-20	0	multi-exon	FALSE	canonical	3	99	junction_6	9.88989383158384	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1463	False	NA	26	True	AATAAA	-17	NA	70687246	70715755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
Isoform_180696_3	chr8	+	4218	11	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	90	junction_9	12.2653984851696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1489	False	NA	24	True	AATAAA	-15	NA	70687272	70715753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70713240_70713880_70713968_70715520
Isoform_180697_9	chr8	+	4908	10	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-41	0	intron_retention	FALSE	canonical	3	99	junction_6	10.257186580306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1442	False	NA	26	True	AATAAA	-17	NA	70687225	70715755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70713968_70715520
Isoform_180698_4	chr8	+	3681	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	31.9027447716798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1453	False	NA	26	True	AATAAA	-17	NA	70687236	70715755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711729_70712332_70712470_70713118_70713240_70713880_70713968_70715520
Isoform_1807_16	chr10	-	1490	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	36	6	-32	-6	multi-exon	FALSE	canonical	3	2101	junction_1	71	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAGATAGAGTGATTGT	NA	False	NA	NA	False	NA	NA	NA	30076520	30072010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30073223_30074461_30074576_30076356
Isoform_180702_25	chr8	+	677	5	FSM	ENSMUSG00000003573.16	ENSMUST00000087467.12	880	5	214	-11	7	11	multi-exon	FALSE	canonical	3	53	junction_4	81.1202810646018	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCTTTGGTGTAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	70735690	70739191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70738945
Isoform_180705_10	chr8	+	2166	9	ISM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	-16	1666	-16	-774	5prime_fragment	FALSE	canonical	3	150	junction_8	37.4814537471534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70735632	70745345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166
Isoform_180707_21	chr8	+	1713	9	ISM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	36	2067	1	556	5prime_fragment	FALSE	canonical	3	150	junction_8	37.4814537471534	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTCTTCCCTCCTTCTA	NA	False	NA	19	True	ATTAAA	-28	NA	70735684	70744944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166
Isoform_18071_3	chr11	-	1642	4	ISM	ENSMUSG00000020776.19	ENSMUST00000125980.2	1992	13	4934	-950	1278	-6	intron_retention	FALSE	canonical	3	43	junction_3	2.44948974278318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGACTTCTGTTTTGGA	NA	False	NA	-16	True	ATTAAA	-11	NA	116036687	116033117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448
Isoform_180712_73	chr8	+	2440	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	-5	10	-5	-2	multi-exon	FALSE	canonical	3	142	junction_9	38.9171326009065	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTGAGATCTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	70735643	70747001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
Isoform_180713_500	chr8	+	2401	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	34	10	-1	-2	multi-exon	FALSE	canonical	3	142	junction_9	38.9171326009065	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTGAGATCTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	70735682	70747001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
Isoform_180714_8	chr8	+	2563	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	-128	10	44	-2	multi-exon	FALSE	canonical	3	142	junction_9	38.9171326009065	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTGAGATCTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	70735520	70747001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
Isoform_180718_11	chr8	+	2595	9	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	142	junction_8	39.3660704160321	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTGAGATCTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	70735642	70747001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70744079_70744166_70744254_70745624
Isoform_18072_5	chr11	-	5371	31	NIC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_30	9.91945338995832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116059006	116033111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058377
Isoform_180722_31	chr8	+	1116	9	ISM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	262	0	7	0	intron_retention	FALSE	canonical	3	1246	junction_3	46.5025200930014	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	714	False	NA	26	True	AATAAA	-15	NA	70755429	70765640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355
Isoform_180724_2385	chr8	+	1040	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	260	0	5	0	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	2385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	712	False	NA	26	True	AATAAA	-15	NA	70755427	70765640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
Isoform_180725_255	chr8	+	1254	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	46	0	46	0	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	498	False	NA	26	True	AATAAA	-15	NA	70755213	70765640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
Isoform_180731_41	chr8	+	1817	9	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1283	junction_8	36.3180395946698	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATACCCACCAGGC	701	False	NA	29	True	AATAAA	-18	NA	70755416	70765643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70755583_70757283_70757347_70758284_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
Isoform_180736_101	chr8	+	2704	8	FSM	ENSMUSG00000087408.11	ENSMUST00000140239.4	2711	8	-6	13	6	-13	multi-exon	FALSE	canonical	3	19	junction_4	3.65892813567591	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAGTTCCATTGCGT	2364	False	NA	NA	False	AAAAAG	-20	NA	70768430	70784224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187_70782927_70783348
Isoform_180737_4	chr8	+	3046	8	FSM	ENSMUSG00000087408.11	ENSMUST00000140239.4	2711	8	11	-346	11	341	multi-exon	FALSE	canonical	3	19	junction_4	3.65892813567591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAACCAAAAAGAAAA	2381	False	NA	NA	False	NA	NA	NA	70768447	70784583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187_70782927_70783348
Isoform_180739_5	chr8	+	628	4	ISM	ENSMUSG00000007888.16	ENSMUST00000008032.14	1644	9	7981	4	6	-4	3prime_fragment	FALSE	canonical	2	10	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCAGTGTGTTTGGGGC	NA	False	NA	NA	False	AATAAA	-23	NA	70953788	70956727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70953929_70955954_70956143_70956246_70956290_70956470
Isoform_18074_3	chr11	-	5158	29	NIC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	5	junction_28	9.48811017504948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTCGACTTCTGTTT	NA	False	NA	-20	True	ATTAAA	-7	NA	116058980	116033121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116058377
Isoform_180740_4	chr8	+	588	3	FSM	ENSMUSG00000007888.16	ENSMUST00000127983.2	544	3	0	-44	0	-7	multi-exon	FALSE	canonical	1	2	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATGGCCAGTGTGTTTGG	NA	False	NA	NA	False	AATAAA	-20	NA	70953782	70956724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70953929_70955954_70956143_70956470
Isoform_180741_218	chr8	+	1948	8	ISM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	4	-2	4	0	intron_retention	FALSE	canonical	0	0	junction_1	458.365107123755	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980400	70987978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
Isoform_180742_1267	chr8	+	1696	9	FSM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	4	-2	4	0	multi-exon	FALSE	canonical	0	0	junction_1	448.998590615828	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980400	70987978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_180745_63	chr8	+	2530	8	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_1	479.613790205309	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980400	70987978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_180747_70	chr8	+	1944	8	ISM	ENSMUSG00000019428.17	ENSMUST00000119353.9	1720	9	27	1	4	0	intron_retention	FALSE	canonical	0	0	junction_1	536.662817411302	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980400	70987977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132
Isoform_180748_336	chr8	+	1691	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119353.9	1720	9	27	2	4	0	multi-exon	FALSE	canonical	0	0	junction_1	528.343741682439	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980400	70987976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_18075_11	chr11	-	5341	31	NIC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_30	9.85455337507602	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTGGATTTGCAT	NA	False	NA	-9	True	ATTAAA	-18	NA	116058972	116033110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058377
Isoform_18076_11	chr11	-	5271	30	FSM	ENSMUSG00000020776.19	ENSMUST00000103031.8	5252	30	-19	0	-6	0	multi-exon	FALSE	canonical	3	14	junction_29	8.33099451920079	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTGGATTTGCAT	NA	False	NA	-9	True	ATTAAA	-18	NA	116058998	116033110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058377
Isoform_180763_39	chr8	+	1868	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	-68	-1	16	0	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980427	70987978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_180764_64	chr8	+	1809	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	-9	-1	-9	0	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980486	70987978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_180765_123	chr8	+	1635	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	165	-1	2	0	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980660	70987978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_18077_4	chr11	-	5175	29	NIC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_28	9.41286570691022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058984	116033111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116058377
Isoform_180771_32	chr8	+	1630	9	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_4	413.857897562678	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980660	70987976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_180774_32	chr8	+	2848	9	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	424.114076635049	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980678	70987978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70981917_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_18079_3	chr11	-	2106	3	ISM	ENSMUSG00000020777.17	ENSMUST00000130229.8	3292	10	7448	0	6396	0	3prime_fragment	TRUE	canonical	3	72	junction_2	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	1	True	AATAAA	-15	NA	116065644	116062713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116064425_116065118_116065326_116065456
Isoform_180791_8	chr8	+	3139	12	NIC	ENSMUSG00000070002.8	novel	457	5	NA	NA	-187	-2	combination_of_known_junctions	TRUE	canonical	2	6	junction_1	42.1565363107432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70991919	71045506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70992143_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
Isoform_180792_233	chr8	+	3062	12	FSM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	8	2	8	-2	multi-exon	FALSE	canonical	3	95	junction_2	19.7818683154445	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70992345	71045506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
Isoform_180794_7	chr8	+	4222	11	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	8	-2	intron_retention	FALSE	canonical	3	95	junction_2	20.7173840047435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70992345	71045506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
Isoform_180797_534	chr8	+	1813	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	24	-1	15	1	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTGTGTGCTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	71047154	71049939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
Isoform_180798_40	chr8	+	1950	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	-114	0	-6	0	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047016	71049938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
Isoform_180799_85	chr8	+	1856	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	-19	-1	-11	1	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTGTGTGCTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	71047111	71049939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
Isoform_180800_33	chr8	+	1902	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210878.2	1916	10	15	-1	15	1	multi-exon	FALSE	canonical	3	300	junction_1	45.5894183087303	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTGTGTGCTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	71047154	71049939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
Isoform_180810_3016	chr8	+	790	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	131	4	0	2	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	3016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCCAGCTGTTCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	71126028	71131398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
Isoform_180811_50	chr8	+	917	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	4	4	4	2	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCCAGCTGTTCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	71125901	71131398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
Isoform_18082_3	chr11	-	4157	15	NIC	ENSMUSG00000020777.17	novel	3987	14	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	30.2334454617696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGGCTGTTACGTGTA	NA	False	NA	-1	True	AATAAA	-13	NA	116089882	116062715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116080240_116080402_116089047_116089208_116089421
Isoform_180828_9	chr8	+	1167	4	FSM	ENSMUSG00000095026.3	ENSMUST00000179347.3	1149	4	-20	2	-20	-2	multi-exon	FALSE	canonical	2	5	junction_1	14.4299072146089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAGTAAAGTCTCACGA	NA	False	NA	NA	False	NA	NA	NA	71171171	71175279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71171282_71173068_71173378_71174425_71174587_71174692
Isoform_180829_17	chr8	+	845	3	FSM	ENSMUSG00000095026.3	ENSMUST00000213065.2	842	3	-2	-1	-2	1	multi-exon	FALSE	canonical	3	28	junction_1	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAGTCTCACGATTCAG	NA	False	NA	NA	False	CATAAA	-4	NA	71171189	71175284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71171282_71174425_71174587_71174692
Isoform_18083_3	chr11	-	3878	15	NIC	ENSMUSG00000020777.17	novel	3743	14	NA	NA	26	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_12	30.2334454617696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	1	True	AATAAA	-15	NA	116089601	116062713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116080240_116080402_116089047_116089208_116089421
Isoform_180830_4	chr8	+	3095	15	NIC	ENSMUSG00000031842.16	novel	3380	18	NA	NA	6005	-1	combination_of_known_junctions	TRUE	canonical	1	2	junction_14	1.66598625567009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	71182718	71203823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198708_71198832_71198886_71199180_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
Isoform_180831_3	chr8	+	3018	15	FSM	ENSMUSG00000031842.16	ENSMUST00000224874.2	3099	15	81	0	34	0	multi-exon	FALSE	canonical	1	2	junction_14	1.61150202466835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTAGCTGGA	NA	False	NA	NA	False	NA	NA	NA	71195761	71203824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71195899_71197922_71198115_71198515_71198553_71198636_71198708_71198832_71198886_71199180_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
Isoform_180832_30	chr8	+	1339	5	FSM	ENSMUSG00000031840.15	ENSMUST00000034301.12	1363	5	-7	31	1	-31	multi-exon	FALSE	canonical	3	41	junction_1	7.43303437365925	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGCTGGCCCAGCC	NA	False	NA	15	True	AATAAA	-15	NA	71207352	71211250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71207513_71208502_71208731_71209093_71209213_71209783_71209909_71210543
Isoform_180834_23	chr8	+	1345	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	24	73	0	-31	multi-exon	FALSE	canonical	3	27	junction_1	12.8646803302686	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGCTGGCCCAGCC	NA	False	NA	15	True	AATAAA	-15	NA	71207351	71211250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
Isoform_180835_4	chr8	+	1412	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	24	6	0	-6	multi-exon	FALSE	canonical	3	27	junction_1	12.8646803302686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCGCACCCTGCCCAG	NA	False	NA	82	True	ATTAAA	-13	NA	71207351	71211317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
Isoform_180836_4	chr8	+	3432	4	ISM	ENSMUSG00000000791.10	ENSMUST00000212657.2	2741	15	8367	-2116	3635	2116	3prime_fragment	FALSE	canonical	2	4	junction_3	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGGTGTTGTGCGGTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	71269494	71276184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_71269684_71269855_71269991_71272325_71272408_71273158
Isoform_180837_605	chr8	+	3262	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	52	0	2	0	multi-exon	FALSE	canonical	3	269	junction_1	20.5236990384829	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGTCTTACTGTCTT	NA	False	NA	13	True	AATAAA	-13	NA	71358627	71370171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
Isoform_180839_11	chr8	+	3845	6	NIC	ENSMUSG00000019261.4	novel	3314	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	269	junction_1	22.3302485431757	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGGTCTTACTGTCT	NA	False	NA	12	True	AATAAA	-12	NA	71358627	71370170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_71358772_71363588_71363694_71364489_71365298_71365549_71367639_71368994_71369219_71369695
Isoform_18084_64	chr11	-	3718	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	267	2	23	-2	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGGCTGTTACGTGTA	NA	False	NA	-1	True	AATAAA	-13	NA	116089604	116062715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
Isoform_180853_3	chr8	+	2935	14	ISM	ENSMUSG00000004677.18	ENSMUST00000212935.2	6316	40	9	24976	9	-4063	5prime_fragment	FALSE	canonical	0	0	junction_1	31.1903869274876	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	71725366	71787589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956
Isoform_180854_4	chr8	+	7310	42	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.8730979927993	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725399	71813357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801556_71801588_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
Isoform_180855_9	chr8	+	7342	42	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.7659560991834	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725364	71813357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801556_71801588_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
Isoform_180858_3	chr8	+	7214	41	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.2516363311808	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGTGGTCTTGCTGCT	NA	False	NA	12	True	AATAAA	-15	NA	71725377	71813353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801556_71801588_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
Isoform_180859_7	chr8	+	7331	40	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	40.1680559066389	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGTCTTGCTGCTTG	NA	False	NA	14	True	AATAAA	-17	NA	71725364	71813355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801556_71801588_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
Isoform_18086_33	chr11	-	4000	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	-15	2	-15	-2	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGGCTGTTACGTGTA	NA	False	NA	-1	True	AATAAA	-13	NA	116089886	116062715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
Isoform_180861_4	chr8	+	7126	41	NNC	ENSMUSG00000004677.18	novel	6316	40	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	41.4714058117156	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71725357	71813354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801556_71801588_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
Isoform_180862_3	chr8	+	7342	42	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	7	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.8019942048493	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71725364	71813354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801556_71801588_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
Isoform_180864_7	chr8	+	7224	41	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.4861010100998	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725364	71813356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801556_71801588_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
Isoform_180868_209	chr8	+	982	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110054.8	973	9	-11	2	-11	1	multi-exon	FALSE	canonical	3	188	junction_1	224.605626599157	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71819574	71822374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_180869_38	chr8	+	1045	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110053.9	1064	9	20	-1	20	1	multi-exon	FALSE	canonical	3	188	junction_1	224.605626599157	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71819511	71822374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_180876_532	chr8	+	844	8	FSM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	8	2	8	1	multi-exon	FALSE	canonical	3	608	junction_1	107.997165495683	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71819868	71822374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_180884_367	chr8	+	749	7	ISM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	377	2	-47	1	3prime_fragment	FALSE	canonical	3	658	junction_5	82.6975748670352	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71820237	71822374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_180885_19	chr8	+	820	7	ISM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	306	2	-118	1	3prime_fragment	FALSE	canonical	3	658	junction_5	82.6975748670352	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71820166	71822374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_180886_19	chr8	+	1003	6	NIC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	-47	1	intron_retention	FALSE	canonical	3	802	junction_4	38.206805676476	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71820237	71822374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821948_71822170
Isoform_180888_14	chr8	+	735	6	NIC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	-46	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	339.251293291566	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71820238	71822374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_71820338_71820413_71820493_71820602_71820756_71821493_71821522_71821775_71821948_71822170
Isoform_180894_38	chr8	+	1118	4	FSM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	-38	531	3	203	multi-exon	FALSE	canonical	3	42	junction_2	9.2736184954957	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTGCAGCTACCTAAAA	NA	False	NA	13	True	AGTAAA	-18	NA	71823944	71825802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71824630_71825111_71825278_71825392_71825447_71825589
Isoform_180895_12	chr8	+	913	3	FSM	ENSMUSG00000002396.9	ENSMUST00000110051.2	2179	3	43	1223	2	204	multi-exon	FALSE	canonical	3	32	junction_1	15.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGCAGCTACCTAAAAG	NA	False	NA	14	True	AGTAAA	-19	NA	71823984	71825803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71824630_71825392_71825447_71825589
Isoform_180898_12	chr8	+	1471	3	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	4	5260	4	-597	5prime_fragment	FALSE	canonical	3	350	junction_2	7	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71849508	71852003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_71849665_71850322_71850670_71851035
Isoform_180899_626	chr8	+	1358	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	6	69	6	-69	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGTGTCACTTTGGGC	NA	False	NA	20	True	AATAAA	-22	NA	71849510	71857194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
Isoform_180900_35	chr8	+	1422	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	3	8	3	-8	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGCAGTGGTGTATGG	NA	False	NA	81	True	AAAACA	-8	NA	71849507	71857255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
Isoform_180905_3	chr8	+	1559	8	ISM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	0	752	0	-5	5prime_fragment	TRUE	canonical	3	14	junction_4	32.6384023218424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAAGTACCAAATGTGC	NA	False	NA	NA	False	NA	NA	NA	71858653	71861796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565
Isoform_180906_13	chr8	+	2141	9	FSM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	0	-5	0	5	multi-exon	FALSE	canonical	3	14	junction_4	30.5366071298041	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTCCATGTCTCATC	NA	False	NA	23	True	NA	NA	NA	71858653	71862553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
Isoform_180909_7	chr8	+	2081	9	FSM	ENSMUSG00000046295.14	ENSMUST00000120725.2	1641	9	-14	-426	0	5	multi-exon	FALSE	canonical	2	5	junction_4	33.431833632034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTCCATGTCTCATC	NA	False	NA	23	True	NA	NA	NA	71858653	71862553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859916_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
Isoform_180913_6	chr8	+	2340	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	1	-2	intron_retention	TRUE	non_canonical	0	0	junction_8	35.0461748982681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTACTTTGTCTCCATG	NA	False	NA	16	True	NA	NA	NA	71858666	71862546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870_71862180_71862199
Isoform_180914_4	chr8	+	3162	7	NNC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	-7	5	intron_retention	FALSE	non_canonical	0	0	junction_6	40.2519840780827	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTCCATGTCTCATC	NA	False	NA	23	True	NA	NA	NA	71858646	71862553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71861469_71861565_71862205_71862226
Isoform_180916_9	chr8	+	2625	6	ISM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	-5	-35	1	-1	intron_retention	FALSE	canonical	3	99	junction_2	7.57891812859857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTACTTTGTCTCCATGT	NA	False	NA	17	True	NA	NA	NA	71858654	71862547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565
Isoform_180917_8	chr8	+	2445	7	FSM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	5	-40	-1	4	multi-exon	FALSE	canonical	3	94	junction_6	8.31998931623246	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTCTCCATGTCTCAT	NA	False	NA	22	True	NA	NA	NA	71858664	71862552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
Isoform_180920_4	chr8	+	3040	7	NNC	ENSMUSG00000046295.14	novel	2410	7	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	40.0808211270955	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTACTTTGTCTCCAT	NA	False	NA	15	True	NA	NA	NA	71858654	71862545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71861469_71861565_71861696_71861870_71862197_71862226
Isoform_180922_521	chr8	+	603	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	3	1	3	-1	multi-exon	FALSE	canonical	3	904	junction_1	0	521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTACGTATGTATTAAC	8923	False	NA	17	True	AATAAA	-17	NA	71917605	71918390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71917712_71917893
Isoform_180925_433	chr8	+	1916	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	18	-1	6	1	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTGTATTTTTCTGT	NA	False	NA	14	True	NA	NA	NA	71921860	71928743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
Isoform_180926_42	chr8	+	1942	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	-13	4	-13	-4	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCCATCCTGTGTATTTT	NA	False	NA	9	True	NA	NA	NA	71921829	71928738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
Isoform_18093_6	chr11	-	3987	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	-246	2	-2	-2	multi-exon	FALSE	canonical	2	9	junction_11	29.8427833148373	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGGCTGTTACGTGTA	NA	False	NA	-1	True	AATAAA	-13	NA	116089873	116062715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
Isoform_180937_6	chr8	+	2294	9	FSM	ENSMUSG00000007610.16	ENSMUST00000127741.2	2392	9	-25	123	-2	-123	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTAGTAGCATGTGG	NA	False	NA	16	True	ATTAAA	-18	NA	71941369	71945921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943298_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
Isoform_180938_13	chr8	+	1395	8	ISM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	623	965	-2	-965	5prime_fragment	FALSE	canonical	0	0	junction_4	25.2303671905787	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCAGCCTCAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	71941369	71945079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720
Isoform_180939_196	chr8	+	2053	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	625	122	0	-122	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTAGTAGCATGTGGT	NA	False	NA	17	True	ATTAAA	-19	NA	71941371	71945922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
Isoform_18094_24	chr11	-	3717	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	26	0	26	0	multi-exon	FALSE	canonical	2	9	junction_11	29.8427833148373	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	1	True	AATAAA	-15	NA	116089601	116062713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
Isoform_180942_4	chr8	+	2263	8	NIC	ENSMUSG00000007610.16	novel	2800	9	NA	NA	1	-133	intron_retention	FALSE	canonical	0	0	junction_4	25.6371860024155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTTTACTTGTGTAG	NA	False	NA	6	True	ATTAAA	-8	NA	71941365	71945911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71944235_71944720_71945000_71945182
Isoform_180943_41	chr8	+	1978	8	FSM	ENSMUSG00000007610.16	ENSMUST00000095259.10	2109	8	7	124	0	-124	multi-exon	TRUE	canonical	0	0	junction_4	25.5774135055258	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941371	71945920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943709_71943854_71944068_71944235_71944720_71945000_71945182
Isoform_180945_6	chr8	+	2726	6	FSM	ENSMUSG00000007610.16	ENSMUST00000124349.8	2830	6	-20	124	2	-124	multi-exon	FALSE	canonical	3	52	junction_2	10.7962956610126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941366	71945920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71944235_71944720_71945000_71945182
Isoform_180948_429	chr8	+	1069	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	-7	0	1	0	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995566	72000670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
Isoform_180949_8	chr8	+	1133	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	-10	-61	-2	2	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTGTGTGCGTGCGTG	NA	False	NA	72	True	NA	NA	NA	71995563	72000731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
Isoform_18095_5	chr11	-	3253	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	-274	764	-30	-764	multi-exon	FALSE	canonical	2	9	junction_11	29.8427833148373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGTCTTCTTGTTG	NA	False	NA	NA	False	NA	NA	NA	116089901	116063477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
Isoform_180950_18	chr8	+	1101	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	-39	0	-31	0	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995534	72000670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
Isoform_180953_123	chr8	+	2753	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	37	junction_11	40.1631222502545	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022323	72039352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180954_41	chr8	+	3348	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	37	junction_11	40.1631222502545	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72022323	72039947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180960_15	chr8	+	2583	12	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	58.6489767970324	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72022323	72039351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_72022486_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037190_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180961_13	chr8	+	3180	12	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	12	junction_1	50.3216102962725	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72022323	72039947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72022486_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180963_13	chr8	+	2753	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	50.2843995025628	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72022793	72039351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180964_5	chr8	+	3292	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	35	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	50.2843995025628	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72022850	72039947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180966_36	chr8	+	3220	12	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1760	-595	32	1	3prime_fragment	FALSE	canonical	1	37	junction_10	35.20847005532	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72023330	72039947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180968_44	chr8	+	2717	12	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1667	1	-61	-1	3prime_fragment	FALSE	canonical	1	37	junction_10	35.20847005532	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72023237	72039351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180969_17	chr8	+	3314	12	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1666	-595	-62	1	3prime_fragment	FALSE	canonical	1	37	junction_10	35.20847005532	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72023236	72039947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180977_5	chr8	+	2720	11	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	43	1	intron_retention	FALSE	canonical	1	37	junction_9	36.4939721049929	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGGCTGTTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	72023341	72039350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72023533_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_180979_888	chr8	+	898	5	FSM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	-6	1	-6	-1	multi-exon	FALSE	canonical	3	546	junction_2	58.7132864009502	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTGTTTCTGTGGTTCT	NA	False	NA	14	True	ATTAAA	-14	NA	72044813	72048912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72048700
Isoform_18098_6	chr11	-	1917	9	ISM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	-35	5989	-35	1843	5prime_fragment	FALSE	canonical	3	53	junction_7	16.7663166795811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAATTACAATTCGAA	NA	False	NA	NA	False	NA	NA	NA	116089906	116068702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
Isoform_180982_20	chr8	+	1143	5	FSM	ENSMUSG00000031807.11	ENSMUST00000143441.2	1062	5	-84	3	-4	-3	multi-exon	FALSE	canonical	3	15	junction_1	254.639941878724	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTATTGTTTCTGTGGTT	NA	False	NA	12	True	ATTAAA	-12	NA	72044850	72048910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72045433_72046727_72046836_72047312_72047415_72047704_72047846_72048700
Isoform_180987_23	chr8	+	2456	4	NIC	ENSMUSG00000031807.11	novel	1062	5	NA	NA	5	-3	intron_retention	FALSE	canonical	3	546	junction_1	55.9185916211137	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTATTGTTTCTGTGGTT	NA	False	NA	12	True	ATTAAA	-12	NA	72044832	72048910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72046836_72047312_72047415_72047704_72047846_72048700
Isoform_18099_6	chr11	-	1638	9	ISM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	243	5990	-1	1842	5prime_fragment	FALSE	canonical	3	53	junction_7	16.7663166795811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAATTACAATTCGA	NA	False	NA	NA	False	NA	NA	NA	116089628	116068703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
Isoform_180990_1620	chr8	+	3034	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	172	1	-1	-1	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTGGGTTTGGTGCCC	NA	False	NA	29	True	ATTAAA	-21	NA	72063813	72077554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
Isoform_181_53	ERCC-00144	+	518	1	FSM	ERCC-00144A	DQ854995	521	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	C	NA	False	NA	NA	False	NA	NA	NA	2	520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00144_+_0_500
Isoform_18100_7	chr11	-	1612	9	ISM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	26	5989	26	1843	5prime_fragment	FALSE	canonical	2	9	junction_6	37.1172129880464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAATTACAATTCGAA	NA	False	NA	NA	False	NA	NA	NA	116089601	116068702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
Isoform_181001_42	chr8	+	4911	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	190	-1894	17	1894	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAGTCAAAATAGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	72063831	72079449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
Isoform_181007_183	chr8	+	3837	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-1	1	intron_retention	FALSE	canonical	3	838	junction_7	59.7648726259832	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063813	72077551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
Isoform_18101_8	chr11	-	6393	22	FSM	ENSMUSG00000034282.4	ENSMUST00000037007.4	6384	22	-12	3	-12	-3	multi-exon	FALSE	canonical	1	1	junction_4	2.11355628773068	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCGAGTCTCCTCTCAT	9952	False	NA	NA	False	AATAAA	-12	NA	116128915	116111387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120400_116120570_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650_116123813_116123929_116123969_116124211_116124338_116124980_116125108_116125194_116125350_116125757_116125858_116128725
Isoform_181011_68	chr8	+	3862	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-27	0	intron_retention	FALSE	canonical	3	838	junction_7	59.7648726259832	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGTCTTTGGGTTTGGT	NA	False	NA	25	True	ATTAAA	-17	NA	72063787	72077550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
Isoform_181039_7	chr8	+	1460	7	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-37	88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	88.2187936641369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCACTACACCCAGCTACT	NA	False	NA	NA	False	NA	NA	NA	72129158	72133038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132783_72132802
Isoform_181041_191	chr8	+	3490	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	271	248	15	-248	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGCGGTTGTCAGCAC	NA	False	NA	23	True	ATTAAA	-15	NA	72129210	72140952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
Isoform_181042_37	chr8	+	3551	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	208	250	-48	-250	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCGCGGTTGTCAGC	NA	False	NA	21	True	ATTAAA	-13	NA	72129147	72140950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
Isoform_181044_9	chr8	+	3791	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	224	-6	-32	4	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGGTTTGTGACTGGA	NA	False	NA	2	True	AATAGA	-1	NA	72129163	72141206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
Isoform_181045_6	chr8	+	3805	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	-47	251	-47	-251	multi-exon	TRUE	canonical	3	153	junction_6	28.4113052926296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGCGCGGTTGTCAG	NA	False	NA	20	True	ATTAAA	-12	NA	72128892	72140949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
Isoform_181047_47	chr8	+	3829	25	FSM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	190	0	-66	0	multi-exon	FALSE	canonical	3	125	junction_24	33.9656689418399	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129129	72143219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
Isoform_181048_170	chr8	+	3796	25	FSM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	223	0	-33	0	multi-exon	FALSE	canonical	3	125	junction_24	33.9656689418399	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129162	72143219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
Isoform_181050_12	chr8	+	4012	25	FSM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	7	0	7	0	multi-exon	FALSE	canonical	3	125	junction_24	33.9656689418399	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72128946	72143219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
Isoform_181051_6	chr8	+	4097	23	NIC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-2	-248	intron_retention	FALSE	canonical	3	157	junction_10	24.7775224716821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGCGGTTGTCAGCAC	NA	False	NA	23	True	ATTAAA	-15	NA	72129193	72140952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
Isoform_181059_3	chr8	+	3425	4	FSM	ENSMUSG00000056019.13	ENSMUST00000188685.7	7186	4	-264	4025	-264	790	multi-exon	FALSE	canonical	3	13	junction_3	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTTTATCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	72635598	72645546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72636053_72641107_72641235_72641444_72641506_72642763
Isoform_181061_7	chr8	+	3160	4	FSM	ENSMUSG00000056019.13	ENSMUST00000188685.7	7186	4	0	4026	0	789	multi-exon	FALSE	canonical	3	13	junction_3	3.85861230093008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGGCTTTATCTTTGA	NA	False	NA	NA	False	NA	NA	NA	72635862	72645545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72636053_72641107_72641235_72641444_72641506_72642763
Isoform_181062_4	chr8	+	3072	3	FSM	ENSMUSG00000089857.10	ENSMUST00000110002.8	3152	3	-2	82	-2	-82	multi-exon	FALSE	canonical	2	4	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	72662449	72670116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72662583_72666965_72667093_72667304
Isoform_181064_86	chr8	+	2917	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	4	-1	4	1	multi-exon	FALSE	canonical	3	55	junction_3	7.78888096369861	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	30	True	AATAAA	-18	NA	72676699	72688474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
Isoform_181065_37	chr8	+	2856	3	NIC	ENSMUSG00000066880.16	novel	2920	4	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	30	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	30	True	AATAAA	-18	NA	72676699	72688474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_72676817_72682045_72682173_72685862
Isoform_181068_36	chr8	+	2708	4	FSM	ENSMUSG00000052446.18	ENSMUST00000138304.8	2307	4	6	-407	1	0	multi-exon	FALSE	canonical	3	16	junction_2	188.733203814862	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704915	72724177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72705005_72719637_72719761_72719943_72720005_72721742
Isoform_18107_1749	chr11	-	2422	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	104	0	22	0	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	1749	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9921	False	NA	-2	True	ATTAAA	-17	NA	116164939	116135991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
Isoform_181072_555	chr8	+	2706	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	7	0	1	0	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704921	72724177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
Isoform_181074_213	chr8	+	2645	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	11	-2055	1	0	multi-exon	FALSE	canonical	3	96	junction_2	182.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704921	72724177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72705005_72719637_72719765_72721742
Isoform_181076_45	chr8	+	2776	4	FSM	ENSMUSG00000052446.18	ENSMUST00000145256.8	504	4	8	-2280	1	0	multi-exon	FALSE	canonical	3	61	junction_2	168.256418071413	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704921	72724177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72705005_72719637_72719835_72719943_72720005_72721742
Isoform_181077_16	chr8	+	2585	3	FSM	ENSMUSG00000052446.18	ENSMUST00000139781.8	416	3	-5	-2164	1	0	multi-exon	FALSE	canonical	3	50	junction_1	148.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704915	72724177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72705005_72719943_72720005_72721742
Isoform_181078_22	chr8	+	2493	2	FSM	ENSMUSG00000052446.18	ENSMUST00000144807.2	701	2	23	-1815	12	0	multi-exon	FALSE	canonical	3	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704946	72724177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72705005_72721742
Isoform_181080_33	chr8	+	2859	4	FSM	ENSMUSG00000052446.18	ENSMUST00000151168.2	698	4	-4	-2157	-4	0	multi-exon	FALSE	canonical	3	39	junction_1	148.102066907327	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72707286	72724177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72707523_72719637_72719765_72719943_72720005_72721742
Isoform_181086_1476	chr8	+	2082	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	69	7	40	-5	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTGTCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	72889141	72906979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
Isoform_181087_52	chr8	+	2176	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	-25	7	-25	-5	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTGTCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	72889047	72906979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
Isoform_181090_166	chr8	+	2013	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	26	5	26	-5	multi-exon	FALSE	canonical	3	103	junction_1	228.433708510092	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTGTCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	72889677	72906979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
Isoform_181097_74	chr8	+	1860	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	147	2543	-12	-2543	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTAGTTCCACCTG	NA	False	NA	10	True	ATTAAA	-10	NA	72915190	72935205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
Isoform_181098_721	chr8	+	1783	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	141	2626	-18	-2626	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCTGCCCTCCCCTGGA	NA	False	NA	22	True	ATTAAA	-19	NA	72915184	72935122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
Isoform_1811_153	chr10	-	1795	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	69	495	-3	-5	multi-exon	FALSE	canonical	3	159	junction_10	17.7080882335979	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476676	30410715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
Isoform_181102_19	chr8	+	1905	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	22	2623	22	-2623	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCCTCCCCTGGAGTC	NA	False	NA	25	True	ATTAAA	-22	NA	72915065	72935125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
Isoform_181115_12	chr8	+	1772	3	ISM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	17	975	17	13	intron_retention	FALSE	canonical	3	987	junction_1	5.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAACAGATATATGAGAT	NA	False	NA	31	True	AATATA	-27	NA	72973590	72977287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_72973705_72973784_72973927_72975771
Isoform_181116_241	chr8	+	1560	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	17	987	17	1	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTTGTGCGTGAAACA	NA	False	NA	19	True	AATATA	-15	NA	72973590	72977275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
Isoform_181117_546	chr8	+	1152	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	15	1397	15	-409	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTGTGAATGTTGTC	NA	False	NA	13	True	AATAAA	-13	NA	72973588	72976865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
Isoform_181121_11	chr8	+	1909	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	15	640	15	348	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCCGGGTGTGGTGGC	NA	False	NA	NA	False	AATAAA	-20	NA	72973588	72977622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
Isoform_181127_534	chr8	+	2028	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	55	1	-22	-1	multi-exon	FALSE	canonical	3	513	junction_9	40.3802177244139	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTCTCTGTG	NA	False	NA	18	True	ATTAAA	-19	NA	72993916	73011228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
Isoform_181128_1176	chr8	+	2005	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	79	0	1	0	multi-exon	FALSE	canonical	3	513	junction_9	40.3802177244139	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993940	73011229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
Isoform_181141_5709	chr8	+	1512	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	306	29	-306	multi-exon	FALSE	canonical	3	2955	junction_2	16	5709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGTAGTGGTGTGGCT	NA	False	NA	33	True	ATTAAA	-20	NA	73072905	73075194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73072994_73073269_73074087_73074587
Isoform_181142_253	chr8	+	1610	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	-69	306	-69	-306	multi-exon	FALSE	canonical	3	2955	junction_2	16	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGTAGTGGTGTGGCT	NA	False	NA	33	True	ATTAAA	-20	NA	73072807	73075194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73072994_73073269_73074087_73074587
Isoform_181143_309	chr8	+	1818	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	0	29	0	multi-exon	FALSE	canonical	3	2955	junction_2	16	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTGGGGTTTAGCCAA	NA	False	NA	21	True	ATTAAA	-16	NA	73072905	73075500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73072994_73073269_73074087_73074587
Isoform_18116_16	chr11	-	2253	20	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	4	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_13	70.0554983793963	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGGGTGAGTGTGAAGT	8931	False	NA	-1	True	CATAAA	-20	NA	116197549	116179929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_181165_6	chr8	+	1512	3	ISM	ENSMUSG00000052794.14	ENSMUST00000121902.2	2373	8	-32	10491	20	-8501	5prime_fragment	FALSE	canonical	3	59	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAGTAGTCTGAA	NA	False	NA	NA	False	NA	NA	NA	73197743	73203994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_73197834_73198593_73199315_73203293
Isoform_181166_291	chr8	+	2396	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	31	460	-21	-100	multi-exon	FALSE	canonical	3	59	junction_1	11.7334338276463	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	6	True	AGTAAA	-21	NA	73197754	73214385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
Isoform_181168_9	chr8	+	2445	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	-18	460	-18	-100	multi-exon	FALSE	canonical	3	59	junction_1	11.7334338276463	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	6	True	AGTAAA	-21	NA	73197705	73214385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
Isoform_181169_6	chr8	+	2305	8	FSM	ENSMUSG00000052794.14	ENSMUST00000121902.2	2373	8	-32	100	20	-100	multi-exon	FALSE	canonical	0	0	junction_4	27.5251276665745	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	6	True	AGTAAA	-21	NA	73197743	73214385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73209059_73209412_73211816_73211913_73212446_73212614_73213872
Isoform_18117_11	chr11	-	2148	19	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	62.4539583499737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGCCGGGTGAGTGT	8938	False	NA	-6	True	CATAAA	-15	NA	116197542	116179934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_181170_7	chr8	+	2094	2	FSM	ENSMUSG00000097000.3	ENSMUST00000181452.2	2994	2	-9	909	-9	-909	multi-exon	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTTTACAGCCCATC	NA	False	NA	NA	False	AATAAA	-14	NA	73246768	73258434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73246895_73256466
Isoform_181171_55	chr8	+	2147	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	-27	4	-9	-4	multi-exon	FALSE	canonical	3	40	junction_3	8.51821577561874	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAGCTCTTTTTCTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	73325889	73341122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
Isoform_181174_7	chr8	+	3008	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	-888	4	-870	-4	multi-exon	FALSE	canonical	3	40	junction_3	8.51821577561874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAGCTCTTTTTCTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	73325028	73341122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
Isoform_181175_5	chr8	+	1123	5	FSM	ENSMUSG00000031791.9	ENSMUST00000211914.2	820	5	-45	-258	-9	258	multi-exon	FALSE	canonical	3	7	junction_2	20.2484567313166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAGACTCAATTATCTA	NA	False	NA	NA	False	ACTAAA	-15	NA	73325889	73340283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73326072_73333406_73333564_73335028_73335117_73338543_73338662_73339705
Isoform_181176_13	chr8	+	1927	5	FSM	ENSMUSG00000031791.9	ENSMUST00000211914.2	820	5	-10	-1097	8	-4	multi-exon	FALSE	canonical	3	7	junction_2	20.2484567313166	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAGCTCTTTTTCTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	73325924	73341122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73326072_73333406_73333564_73335028_73335117_73338543_73338662_73339705
Isoform_181177_8	chr8	+	1258	6	FSM	ENSMUSG00000031622.17	ENSMUST00000212095.2	1257	6	0	-1	0	1	multi-exon	FALSE	canonical	3	644	junction_5	28.5587114555261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTAGTTATGTGCAGCA	NA	False	NA	22	True	AATAAA	-19	NA	73449917	73466532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996
Isoform_181178_280	chr8	+	1023	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	5	-4	0	4	multi-exon	FALSE	canonical	3	644	junction_5	27.2197844713485	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATGTGCAGCAGTGTCG	NA	False	NA	28	True	AATAAA	-25	NA	73449917	73466538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
Isoform_18118_12	chr11	-	2182	19	FSM	ENSMUSG00000020792.16	ENSMUST00000106413.10	3298	19	8	1108	1	0	multi-exon	FALSE	canonical	2	10	junction_12	61.2926847990569	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGCCGGGTGAGTGT	8928	False	NA	-6	True	CATAAA	-15	NA	116197552	116179934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_181180_92	chr8	+	4114	19	FSM	ENSMUSG00000031622.17	ENSMUST00000004494.16	4115	19	2	-1	0	1	multi-exon	TRUE	canonical	3	31	junction_6	282.896831519815	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGGGTCCTTCGTCA	NA	False	NA	27	True	ATTAAA	-18	NA	73449917	73484830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
Isoform_181181_6	chr8	+	4394	18	NIC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	0	1	intron_retention	FALSE	canonical	3	31	junction_6	288.422988108098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGGGTCCTTCGTCA	NA	False	NA	27	True	ATTAAA	-18	NA	73449917	73484830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483681_73483802
Isoform_181187_110	chr8	+	3988	12	FSM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	-1	2	-1	-2	multi-exon	FALSE	canonical	3	57	junction_2	21.8858798209528	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAGTCTTAGCTGTCT	NA	False	NA	30	True	ATTAAA	-21	NA	75720305	75758604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
Isoform_18119_239	chr11	-	2084	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	13	1108	6	0	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGCCGGGTGAGTGT	8933	False	NA	-6	True	CATAAA	-15	NA	116197547	116179934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_181193_23	chr8	+	3873	11	FSM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	324	-6	1	0	multi-exon	FALSE	canonical	3	15	junction_4	33.0128762757806	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720307	75758606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
Isoform_181197_58	chr8	+	3875	11	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	24.8185414559357	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAGTCTTAGCTGTCT	NA	False	NA	30	True	ATTAAA	-21	NA	75720314	75758604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
Isoform_1812_4	chr10	-	2027	14	NNC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	66.0214238135385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476687	30410715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30475369_30475591_30476585
Isoform_18120_41	chr11	-	2310	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	7	888	0	174	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTCTGCTTTCATCC	8927	False	NA	0	True	NA	NA	NA	116197553	116179714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_181200_10	chr8	+	3756	10	NIC	ENSMUSG00000034518.15	novel	4191	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	36.3790062916159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGTCCAGTCTTAGCT	NA	False	NA	26	True	ATTAAA	-17	NA	75720314	75758600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
Isoform_181204_21	chr8	+	2701	7	FSM	ENSMUSG00000034518.15	ENSMUST00000109940.2	2656	7	18	-63	18	-2	multi-exon	FALSE	canonical	3	11	junction_1	40.0489284084689	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAGTCTTAGCTGTCT	NA	False	NA	30	True	ATTAAA	-21	NA	75742867	75758604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75743035_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
Isoform_181206_449	chr8	+	2276	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	-17	8	-17	-8	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATGATCTGCTCTGGC	NA	False	NA	4	True	AATAAA	-17	NA	75760315	75796741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
Isoform_181207_19	chr8	+	2325	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	-76	18	-76	-18	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACCTGTCAGCATGAT	NA	False	NA	-6	True	AATAAA	-7	NA	75760256	75796731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
Isoform_181209_11	chr6	+	1720	1	FSM	ENSMUSG00000037827.6	ENSMUST00000036712.6	1479	1	-71	-170	-71	170	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCCTGGCTGGTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	128621804	128623524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_128621800_128623500
Isoform_18121_21	chr11	-	3199	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	8	-2	1	2	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCCTCTGGTGGTGGA	8928	False	NA	NA	False	ATTAAA	-21	NA	116197552	116178824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_181212_15	chr8	+	2072	13	NIC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	88.9817006780358	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATGATCTGCTCTGGC	NA	False	NA	4	True	AATAAA	-17	NA	75760355	75796741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_75760456_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
Isoform_181214_63	chr8	+	2247	15	NNC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.1573573462921	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACCTGTCAGCATGAT	NA	False	NA	-6	True	AATAAA	-7	NA	75760332	75796731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_75760456_75774622_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
Isoform_181217_250	chr8	+	1569	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	1	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_1	104.358456772798	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	11	True	AATAAA	-20	NA	75820249	75827218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
Isoform_181218_46	chr8	+	1603	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	-33	-1	-33	1	multi-exon	FALSE	canonical	0	0	junction_1	104.358456772798	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	11	True	AATAAA	-20	NA	75820215	75827218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
Isoform_181222_1299	chr8	+	2614	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-6	-4	1	4	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836197	75854325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_181224_139	chr8	+	2664	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-56	-4	-49	4	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836147	75854325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_18123_3	chr11	-	1922	2	ISM	ENSMUSG00000034227.8	ENSMUST00000036215.8	2623	3	1185	25	1185	-25	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATTTAAAAAAAT	NA	False	NA	NA	False	AATAAA	-10	NA	116225040	116221554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116223304_116224867
Isoform_181232_2437	chr8	+	2638	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	1	742	1	4	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	2437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836197	75854325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_181236_75	chr8	+	3378	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	2	1	2	-1	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCCTGGCTGAAGTGTTT	NA	False	NA	0	True	NA	NA	NA	75836198	75855066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_181242_1096	chr8	+	2689	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	-29	-7	19	2	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836222	75854323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_18127_12	chr11	-	2682	19	FSM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-31	1968	-3	18	multi-exon	TRUE	canonical	3	28	junction_1	6.47335469348423	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAACTGGTTGGGAAC	3318	False	NA	NA	False	CATAAA	-14	NA	116303861	116229146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116229657_116235020_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
Isoform_181280_16	chr8	+	3512	4	NNC	ENSMUSG00000034472.14	novel	2810	3	NA	NA	-748	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	7.31816613336672	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATGCTTACTTCCTG	NA	False	NA	9	True	ATTAAA	-19	NA	75939823	75950739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_75940707_75945163_75945444_75948346_75949349_75949392
Isoform_181281_3	chr8	+	5654	9	FSM	ENSMUSG00000031618.14	ENSMUST00000109912.8	5675	9	23	-2	23	2	multi-exon	FALSE	canonical	0	0	junction_1	2.17944947177034	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTTGTCCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	77628938	77971638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_77629169_77634898_77636658_77812155_77812296_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
Isoform_181282_401	chr8	+	2769	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	11	1	1	0	multi-exon	FALSE	canonical	3	124	junction_5	20.627751506924	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78276036	78307966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
Isoform_181284_9	chr8	+	4627	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	5	-1851	-5	1851	multi-exon	FALSE	canonical	3	124	junction_5	20.627751506924	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATTTTTTTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	78276030	78309818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
Isoform_181286_14	chr8	+	2736	12	FSM	ENSMUSG00000037134.18	ENSMUST00000210040.2	2688	12	-48	0	-1	0	multi-exon	FALSE	canonical	3	14	junction_4	44.8630606944737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78276034	78307966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289077_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
Isoform_181287_8	chr8	+	2667	11	NIC	ENSMUSG00000037134.18	novel	2781	12	NA	NA	4	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	49.1822122316595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTTAAAGTGTATGTA	NA	False	NA	6	True	AATAAA	-11	NA	78276029	78307960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
Isoform_18129_18	chr11	-	2822	18	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-31	7192	-3	-5139	5prime_fragment	FALSE	canonical	3	29	junction_7	6.30482870916436	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTTCAGTGTGCCC	3318	False	NA	NA	False	AATAAA	-16	NA	116303861	116234370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
Isoform_181290_8	chr8	+	1225	3	FSM	ENSMUSG00000037101.17	ENSMUST00000124713.2	673	3	0	-552	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTTATTTTCATTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	79117610	79120955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_79118107_79119699_79119767_79120293
Isoform_181291_170	chr8	+	3611	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	-15	-1	1	1	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGGAAATGTCGTGGC	NA	False	NA	33	True	ATTAAA	-18	NA	79235981	79460633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
Isoform_181297_4	chr8	+	3225	13	FSM	ENSMUSG00000031684.12	ENSMUST00000211286.2	2752	13	-48	-425	10	1	multi-exon	FALSE	canonical	2	5	junction_12	35.903806669117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGGAAATGTCGTGGC	NA	False	NA	33	True	ATTAAA	-18	NA	79236030	79460633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237_79458779_79459115
Isoform_181298_4	chr8	+	3542	11	NIC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	-12	-1	intron_retention	FALSE	canonical	0	0	junction_4	40.3669419203387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATCTCTGGAAATGTCGT	NA	False	NA	30	True	ATTAAA	-15	NA	79236008	79460630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
Isoform_1813_8	chr10	-	1726	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	52.8487628572059	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGTGATACTCAGT	NA	False	NA	-6	True	AATAAA	-19	NA	30476688	30410714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
Isoform_18130_5	chr11	-	3478	18	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-52	6557	-24	-4504	5prime_fragment	FALSE	canonical	3	29	junction_7	6.30482870916436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTGTGTGAAAGTTCAT	3297	False	NA	NA	False	TTTAAA	-16	NA	116303882	116233735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
Isoform_181301_4	chr8	+	7330	21	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-157	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	64.8731647139247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTGGGATTCTTTGG	NA	False	NA	14	True	ATTAAA	-14	NA	80366089	80404298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391647_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
Isoform_181306_28	chr8	+	7542	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	-157	-31	-157	31	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTTCCATGTATGTTT	NA	False	NA	8	True	AGTAAA	-14	NA	80366089	80404384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
Isoform_181307_36	chr8	+	7536	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	-234	52	-234	0	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGGATTCTTTGGTCT	NA	False	NA	17	True	ATTAAA	-17	NA	80366012	80404301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
Isoform_181314_37	chr8	+	7456	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	-243	0	-157	0	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGGATTCTTTGGTCT	NA	False	NA	17	True	ATTAAA	-17	NA	80366089	80404301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
Isoform_181316_28	chr8	+	7536	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	-240	-83	-154	31	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTTCCATGTATGTTT	NA	False	NA	8	True	AGTAAA	-14	NA	80366092	80404384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
Isoform_181318_26	chr8	+	7620	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	-324	-83	-238	31	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTTCCATGTATGTTT	NA	False	NA	8	True	AGTAAA	-14	NA	80366008	80404384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
Isoform_18132_4	chr11	-	2011	11	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-37	17323	-9	292	5prime_fragment	FALSE	canonical	3	32	junction_7	5.94053869611166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATATTGCAACTGAAAGT	3312	False	NA	NA	False	NA	NA	NA	116303867	116244501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
Isoform_181328_41	chr8	+	857	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	-27	1971	-27	7	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAGTCAATCTTTAAA	NA	False	NA	9	True	AATAAA	-27	NA	80438421	80501978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181329_3	chr8	+	3225	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	-45	-379	-45	379	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTATGATCGTTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	80438403	80504328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181330_65	chr8	+	799	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-20	4	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTGAAGTCAATCTTT	NA	False	NA	6	True	AATAAA	-24	NA	80438428	80501975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181331_46	chr8	+	836	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-54	7	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAGTCAATCTTTAAA	NA	False	NA	9	True	AATAAA	-27	NA	80438394	80501978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181332_10	chr8	+	940	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-87	78	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTATGTGTTTACTTTA	NA	False	NA	29	True	ATTAAA	-35	NA	80438361	80502049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181333_13	chr8	+	856	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-6	75	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATACTATGTGTTTACT	NA	False	NA	26	True	ATTAAA	-32	NA	80438442	80502046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181334_4	chr8	+	677	4	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-16	7	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	212.071266847308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAGTCAATCTTTAAA	NA	False	NA	9	True	AATAAA	-27	NA	80438432	80501978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80501560
Isoform_181335_17	chr8	+	918	5	NIC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	9	5	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	204.767398528184	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAAGTCAATCTTTA	NA	False	NA	7	True	AATAAA	-25	NA	80438488	80501976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_80438604_80439733_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181336_5	chr8	+	977	5	NIC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	19	74	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	204.767398528184	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATACTATGTGTTTAC	NA	False	NA	25	True	ATTAAA	-31	NA	80438498	80502045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_80438604_80439733_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181338_40	chr8	+	882	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	-1	3710	-1	7	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAGTCAATCTTTAAA	NA	False	NA	9	True	AATAAA	-27	NA	80438478	80501978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181340_8	chr8	+	956	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	-4	3639	-4	78	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTATGTGTTTACTTTA	NA	False	NA	29	True	ATTAAA	-35	NA	80438475	80502049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181342_5	chr8	+	858	4	ISM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	1291	1912	1260	66	3prime_fragment	FALSE	canonical	3	499	junction_2	11.4697670227235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAGATATATATACTAT	NA	False	NA	17	True	ATTAAA	-23	NA	80439739	80502037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_181343_6	chr8	+	5738	21	FSM	ENSMUSG00000031709.16	ENSMUST00000093393.5	5334	21	-398	-6	110	6	multi-exon	TRUE	canonical	2	4	junction_8	3.27528624703246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTACTTGAGTTTC	NA	False	NA	9	True	AATAAA	-21	NA	83892090	83999569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_83892834_83937049_83937161_83948066_83948186_83960108_83960338_83960740_83961003_83963140_83963349_83966459_83966667_83968166_83968338_83969150_83969302_83976030_83976246_83980086_83980205_83981255_83981542_83982423_83982554_83985623_83985723_83985932_83986002_83987547_83987789_83991475_83991542_83992709_83992797_83995611_83995687_83995772_83995877_83997522
Isoform_181344_9	chr8	+	5688	21	FSM	ENSMUSG00000031709.16	ENSMUST00000093393.5	5334	21	-349	-5	159	5	multi-exon	FALSE	canonical	2	4	junction_8	3.27528624703246	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTTGTACTTGAGTTT	NA	False	NA	8	True	AATAAA	-20	NA	83892139	83999568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_83892834_83937049_83937161_83948066_83948186_83960108_83960338_83960740_83961003_83963140_83963349_83966459_83966667_83968166_83968338_83969150_83969302_83976030_83976246_83980086_83980205_83981255_83981542_83982423_83982554_83985623_83985723_83985932_83986002_83987547_83987789_83991475_83991542_83992709_83992797_83995611_83995687_83995772_83995877_83997522
Isoform_181345_26	chr8	+	2302	15	FSM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	-9	0	2	0	multi-exon	TRUE	canonical	3	23	junction_5	6.81834260787527	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGAGCCAAGAGATTCG	NA	False	NA	12	True	AATAAA	-18	NA	84116497	84153460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
Isoform_181348_1265	chr8	+	534	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	87	2	0	-2	multi-exon	FALSE	canonical	3	2087	junction_2	87.5	1265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCATCTGTGCTACTTC	NA	False	NA	21	True	AATAAA	-21	NA	84293386	84298253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84293560_84297458_84297628_84298061
Isoform_181350_598	chr8	+	2139	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	107	750	107	-750	multi-exon	FALSE	canonical	3	562	junction_2	45.5	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCAGTCCTTCGACTC	NA	False	NA	10	True	ATTAAA	-19	NA	84334928	84338532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84335172_84336442_84337024_84337217
Isoform_181351_229	chr8	+	2197	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	49	750	49	-750	multi-exon	FALSE	canonical	3	562	junction_2	45.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCAGTCCTTCGACTC	NA	False	NA	10	True	ATTAAA	-19	NA	84334870	84338532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84335172_84336442_84337024_84337217
Isoform_181352_18	chr8	+	2283	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	-38	751	-38	-751	multi-exon	FALSE	canonical	3	562	junction_2	45.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGAGCAGTCCTTCGACT	NA	False	NA	9	True	ATTAAA	-18	NA	84334783	84338531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84335172_84336442_84337024_84337217
Isoform_181363_1607	chr8	+	1607	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	10	-95	1	95	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCTCTCCCTGCTTT	NA	False	NA	21	True	NA	NA	NA	84379315	84391418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
Isoform_181364_25	chr8	+	1661	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	-44	-95	-44	95	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCTCTCCCTGCTTT	NA	False	NA	21	True	NA	NA	NA	84379261	84391418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
Isoform_181365_24	chr8	+	1759	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	-142	-95	-142	95	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCTCTCCCTGCTTT	NA	False	NA	21	True	NA	NA	NA	84379163	84391418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
Isoform_181366_39	chr8	+	1702	6	NIC	ENSMUSG00000019433.10	novel	1522	7	NA	NA	1	96	intron_retention	FALSE	canonical	3	964	junction_1	105.526489565417	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCTCTCCCTGCTTTC	NA	False	NA	22	True	NA	NA	NA	84379315	84391419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_84379367_84387587_84387910_84388583_84389045_84389677_84389791_84390548_84390631_84390746
Isoform_181378_886	chr8	+	1561	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	23	72	23	1	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGCTCCAGCCCCAT	NA	False	NA	27	True	AATAAA	-13	NA	84441828	84449905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
Isoform_181379_1509	chr8	+	1493	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	92	71	1	2	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGCTCCAGCCCCATC	NA	False	NA	28	True	AATAAA	-14	NA	84441897	84449906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
Isoform_18138_2161	chr11	-	1801	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	40	0	6	0	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	2161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381134	116361670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
Isoform_181384_34	chr8	+	1868	10	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	2216	junction_5	100.447885880081	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441897	84449904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
Isoform_181387_44	chr8	+	1736	11	FSM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	-15	73	-15	0	multi-exon	FALSE	canonical	3	134	junction_1	682.0140834323	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84442161	84449904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84442476_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
Isoform_18139_30	chr11	-	1872	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	-31	0	-31	0	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381205	116361670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
Isoform_181399_3	chr8	+	6247	24	FSM	ENSMUSG00000013033.17	ENSMUST00000045393.15	5643	24	-613	9	-3	-9	multi-exon	FALSE	canonical	1	3	junction_4	19.7858095833748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	3069	False	NA	NA	False	NA	NA	NA	84626730	84666631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84652890_84652906_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
Isoform_1814_5	chr10	-	1671	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	51.2211216763663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476709	30410715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
Isoform_181400_3	chr8	+	2226	5	ISM	ENSMUSG00000013033.17	ENSMUST00000132500.8	5719	22	-629	9603	1	332	5prime_fragment	FALSE	canonical	3	37	junction_4	17.1318416990118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTCCCTTCTTCGAGTT	3073	False	NA	NA	False	AAGAAA	-19	NA	84626734	84657013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092
Isoform_181401_12	chr8	+	6230	23	FSM	ENSMUSG00000013033.17	ENSMUST00000141158.8	8181	23	-1	1952	-1	-9	multi-exon	FALSE	canonical	3	37	junction_4	11.1024530086786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	3071	False	NA	NA	False	NA	NA	NA	84626732	84666631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
Isoform_181407_4	chr8	+	3696	3	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	13546	-1935	42	-8	3prime_fragment	FALSE	canonical	3	74	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATAGAGTGGTGTGAT	75	False	NA	5	True	AATAAA	-18	NA	84664325	84668575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_84664407_84664544_84664563_84664978
Isoform_181409_163	chr8	+	1609	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	177	2	-30	-2	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTTTGCTTTTTTCTC	5893	False	NA	21	True	AATAAA	-14	NA	84682312	84696824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
Isoform_181410_530	chr8	+	1578	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	209	1	2	-1	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTGCTTTTTTCTCT	5925	False	NA	22	True	AATAAA	-15	NA	84682344	84696825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
Isoform_181416_19	chr8	+	1461	3	NIC	ENSMUSG00000005470.9	novel	1788	4	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	267	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTTTGCTTTTTTCTC	5925	False	NA	21	True	AATAAA	-14	NA	84682344	84696824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_84682567_84694462_84694640_84695762
Isoform_181418_2011	chr8	+	2276	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	-7	7	-7	-7	multi-exon	FALSE	canonical	3	651	junction_8	27.9342260972865	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAAGTGTCGCTGGTT	445	False	NA	NA	False	AATAAA	-12	NA	84699614	84723065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
Isoform_181419_921	chr8	+	2304	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	-35	7	-35	-7	multi-exon	FALSE	canonical	3	651	junction_8	27.9342260972865	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAAGTGTCGCTGGTT	417	False	NA	NA	False	AATAAA	-12	NA	84699586	84723065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
Isoform_181428_80	chr8	+	2138	5	FSM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	123	4	123	-4	multi-exon	FALSE	canonical	3	513	junction_1	22.3941956765587	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTCATTTTC	1191	False	NA	19	True	AATAAA	-6	NA	84724252	84727034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
Isoform_181435_24	chr8	+	2492	7	FSM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	-43	3	-43	-3	multi-exon	FALSE	canonical	3	12	junction_2	39.9110121255887	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAGATTTATTT	NA	False	NA	8	True	ATTAAA	-21	NA	84748056	84756921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84748158_84750980_84751030_84752822_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
Isoform_181436_159	chr8	+	2460	5	ISM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	4605	3	1	-3	3prime_fragment	FALSE	canonical	3	94	junction_2	4.49305018890286	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAGATTTATTT	NA	False	NA	8	True	ATTAAA	-21	NA	84752704	84756921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
Isoform_181438_6	chr8	+	2371	4	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	44.8503685108111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATTTATTTATTA	NA	False	NA	12	True	ATTAAA	-25	NA	84752712	84756925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_84752904_84753377_84753521_84754754_84754801_84754934
Isoform_181439_3	chr8	+	2491	4	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	82	1	intron_retention	FALSE	canonical	3	95	junction_1	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATTTATTTATTA	NA	False	NA	12	True	ATTAAA	-25	NA	84752785	84756925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_84752904_84753377_84753714_84754754_84754801_84754934
Isoform_18144_81	chr11	-	1839	10	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	5	-12	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	270.156790323739	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTTCAGTCGGCTG	NA	False	NA	-19	True	AATAAA	-15	NA	116381169	116361682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370666_116376694_116376762_116378943_116378997_116380873
Isoform_181441_57	chr8	+	4135	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	30	7	30	-7	multi-exon	FALSE	canonical	3	25	junction_6	9.14002188181188	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGTCTACTGATGAC	NA	False	NA	14	True	AATAAA	-10	NA	84793494	84823614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
Isoform_181443_35	chr8	+	3814	20	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	28	9	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	11.873058960768	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGAGAGCAGGGTTAGGT	NA	False	NA	30	True	AATAAA	-26	NA	84793492	84823630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
Isoform_181444_4	chr8	+	3305	20	NIC	ENSMUSG00000031706.8	novel	3677	21	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	11.873058960768	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGTTCTCTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	84793459	84823088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
Isoform_181445_26	chr8	+	2445	9	FSM	ENSMUSG00000008129.15	ENSMUST00000118856.8	2366	9	-79	0	55	0	multi-exon	FALSE	canonical	2	9	junction_1	4.49826355386165	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGATCTGTAGCTGTG	1938	False	NA	5	True	AATAAA	-15	NA	84874708	84899219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
Isoform_181446_8	chr8	+	2388	8	FSM	ENSMUSG00000008129.15	ENSMUST00000093375.5	2167	8	-220	-1	7	0	multi-exon	TRUE	canonical	2	6	junction_4	5.92125193601792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGATCTGTAGCTGTG	1890	False	NA	5	True	AATAAA	-15	NA	84874660	84899219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84893209_84894320_84896983_84897082_84898446_84898540_84898789
Isoform_181447_11	chr8	+	2422	8	NIC	ENSMUSG00000008129.15	novel	2366	9	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	5.99659767480439	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGATCTGTAGCTGT	1912	False	NA	4	True	AATAAA	-14	NA	84874682	84899218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_84875028_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
Isoform_181449_5	chr8	+	2328	7	NIC	ENSMUSG00000008129.15	novel	2167	8	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	7.34279692397023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGATCTGTAGCTGT	1901	False	NA	4	True	AATAAA	-14	NA	84874671	84899218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_84875028_84886073_84886237_84887841_84887921_84893209_84894320_84896983_84897082_84898446_84898540_84898789
Isoform_18145_36	chr11	-	1711	9	FSM	ENSMUSG00000015869.17	ENSMUST00000152874.8	1691	9	-30	10	4	-10	multi-exon	FALSE	canonical	3	22	junction_5	291.250321888234	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTTCAGTCGGCTGCT	NA	False	NA	-17	True	AATAAA	-17	NA	116381170	116361680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116370477_116370651_116376694_116376762_116378943_116378997_116380873
Isoform_181450_5	chr8	+	4644	28	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	-3	1835	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.52903192575417	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATTAAATAAATAAATGAA	NA	False	NA	NA	False	NA	NA	NA	85142002	85308926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85308797
Isoform_181451_3	chr8	+	1551	6	NNC	ENSMUSG00000034656.19	novel	1153	5	NA	NA	-22	404	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	17.6249822694946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTCAGTGTGTAAAGG	NA	False	NA	11	True	AATAAA	-17	NA	85328037	85340075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339873_85339913
Isoform_181453_12	chr8	+	1973	7	NIC	ENSMUSG00000034656.19	novel	2941	16	NA	NA	-9224	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	6.02771377334171	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACTTCTGAACTAGAGTG	NA	False	NA	9	True	NA	NA	NA	85356395	85366876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
Isoform_181456_3	chr8	+	1042	2	FSM	ENSMUSG00000034656.19	ENSMUST00000130507.2	249	2	20	-813	20	1	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACTTCTGAACTAGAGTG	NA	False	NA	9	True	NA	NA	NA	85365639	85366876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85365672_85365866
Isoform_181458_70	chr8	+	2333	17	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	133.003230693844	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85412954	85426416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85413329_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_181463_19	chr8	+	2117	17	NIC	ENSMUSG00000001909.17	novel	2138	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	165.143770223857	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415904	85426415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85415979_85416260_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_181465_262	chr8	+	2102	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	42	-6	0	6	multi-exon	FALSE	canonical	3	116	junction_1	116.091541869983	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTGAATTGGGAAGCC	NA	False	NA	21	True	AATAAA	-21	NA	85415917	85426422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_18147_26	chr11	-	3245	8	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	5	-11	intron_retention	FALSE	canonical	3	839	junction_7	39.0227563122351	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTCTTCAGTCGGCTGC	NA	False	NA	-18	True	AATAAA	-16	NA	116381169	116361681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116370651_116376694_116376762_116378943_116378997_116380873
Isoform_181471_93	chr8	+	2018	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	26	0	1	0	multi-exon	FALSE	canonical	3	38	junction_1	132.785409001705	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415918	85426415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_181476_26	chr8	+	2145	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	156.933704155608	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415903	85426415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_181479_493	chr8	+	2135	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	410	22	4	0	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415904	85426415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_181481_46	chr8	+	2373	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	4	0	intron_retention	FALSE	canonical	3	179	junction_1	102.688395968905	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415904	85426415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_181484_24	chr8	+	2097	17	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	161.765153366694	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415904	85426415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417401_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_181488_278	chr8	+	2047	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	113.375964714749	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415917	85426416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_181493_21	chr8	+	2282	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	121	-1	-79	0	3prime_fragment	FALSE	canonical	3	403	junction_2	59.8663697097312	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85416013	85426416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_181494_90	chr8	+	2217	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	185	0	-15	0	3prime_fragment	FALSE	canonical	3	403	junction_2	59.8663697097312	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85416077	85426415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_1815_3	chr10	-	1555	11	FSM	ENSMUSG00000019792.9	ENSMUST00000215595.2	1576	11	15	6	-3	-6	multi-exon	FALSE	canonical	3	12	junction_8	70.5592658691968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTATGTGATACTCA	NA	False	NA	-8	True	AATAAA	-17	NA	30476676	30410716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
Isoform_181504_3	chr8	+	739	2	FSM	ENSMUSG00000074203.5	ENSMUST00000098571.5	721	2	-17	-1	-17	1	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGTGGCTCACATCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	85449618	85453474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85449901_85453017
Isoform_181505_277	chr8	+	1724	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	760	10	760	-10	multi-exon	FALSE	canonical	3	736	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTTATATATATATATAT	3434	False	NA	NA	False	NA	NA	NA	85558910	85562101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85559270_85560736
Isoform_181506_670	chr8	+	716	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	760	1018	760	-1018	multi-exon	FALSE	canonical	3	736	junction_1	0	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTACACATTCTCCCTC	3434	False	NA	25	True	AATAAA	-20	NA	85558910	85561093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85559270_85560736
Isoform_181509_25	chr8	+	1719	13	FSM	ENSMUSG00000003808.19	ENSMUST00000156970.8	1708	13	-11	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	180.621996322584	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583637	85595885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
Isoform_181512_916	chr8	+	1794	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	31	1	0	0	multi-exon	FALSE	canonical	3	551	junction_9	56.0676055212713	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583648	85595885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
Isoform_181513_16	chr8	+	1815	13	FSM	ENSMUSG00000003808.19	ENSMUST00000109754.2	1795	13	-22	2	0	-1	multi-exon	TRUE	canonical	3	15	junction_9	182.281585435526	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTTGTCATTCATTT	NA	False	NA	36	True	AATAAA	-36	NA	85583623	85595884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594381_85594548_85594637_85594716_85594852_85594968_85595494
Isoform_181518_20	chr8	+	769	5	FSM	ENSMUSG00000003824.13	ENSMUST00000170296.2	929	5	110	50	28	-50	multi-exon	FALSE	canonical	3	66	junction_1	678.634428466461	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598849	85614025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85598883_85599330_85599462_85610059_85610214_85612563_85612753_85613763
Isoform_181521_298	chr8	+	757	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	104	825	22	-50	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598843	85614025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
Isoform_181523_10	chr8	+	1578	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	106	2	24	-2	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTGTGCTGTTCTCT	NA	False	NA	NA	False	CATAAA	-12	NA	85598845	85614848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
Isoform_181524_264	chr8	+	602	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	23	60	23	-50	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598844	85614025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
Isoform_181525_15	chr8	+	1426	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	22	-763	22	-2	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTGTGCTGTTCTCT	NA	False	NA	NA	False	CATAAA	-12	NA	85598843	85614848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
Isoform_181527_30	chr8	+	1201	4	NIC	ENSMUSG00000003824.13	novel	929	5	NA	NA	44	-50	intron_retention	FALSE	canonical	3	1047	junction_1	431.92772029074	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598865	85614025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85599462_85610059_85610214_85612563_85612753_85613763
Isoform_181528_43	chr8	+	1048	3	NIC	ENSMUSG00000003824.13	novel	685	4	NA	NA	43	-50	intron_retention	FALSE	canonical	3	832	junction_1	576	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598864	85614025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85599462_85612563_85612753_85613763
Isoform_181531_3	chr8	+	1494	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	51	170	-36	-162	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCTCAGGTGGATCTC	NA	False	NA	NA	False	NA	NA	NA	85635239	85637928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
Isoform_181532_7	chr8	+	1866	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	88	-239	1	0	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTAACCTTTTTCTTAA	NA	False	NA	9	True	AATACA	-19	NA	85635276	85638337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
Isoform_181535_9	chr8	+	1622	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	88	5	1	3	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGTTTTGACTTGAATT	NA	False	NA	13	True	NA	NA	NA	85635276	85638093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
Isoform_181538_6	chr8	+	631	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4620	17	-50	-17	3prime_fragment	FALSE	canonical	3	74	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATAAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	85639969	85641133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_85640158_85640690
Isoform_181544_27	chr8	+	1134	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-13	-3	-13	3	multi-exon	FALSE	canonical	3	99	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGAGTGGGGGTGTTT	NA	False	NA	7	True	AATAAA	-19	NA	85640006	85649547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85640158_85647022_85647134_85648675
Isoform_181546_22	chr8	+	1168	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-47	-3	-47	3	multi-exon	FALSE	canonical	3	99	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGAGTGGGGGTGTTT	NA	False	NA	7	True	AATAAA	-19	NA	85639972	85649547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85640158_85647022_85647134_85648675
Isoform_181549_8	chr8	+	687	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-15	-17	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATAAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	85640004	85641133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_85640158_85640599
Isoform_181550_6	chr8	+	749	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-77	-17	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATAAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	85639942	85641133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_85640158_85640599
Isoform_181551_50	chr8	+	1035	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	58	519	34	4	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTGTTGGTGTGTGT	NA	False	NA	17	True	AATAAA	-17	NA	85696273	85700944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
Isoform_181552_135	chr8	+	986	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	108	518	1	5	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTGTTGGTGTGTGTT	NA	False	NA	18	True	AATAAA	-18	NA	85696323	85700945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
Isoform_181553_2012	chr8	+	898	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	84	518	1	5	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTGTTGGTGTGTGTT	NA	False	NA	18	True	AATAAA	-18	NA	85696323	85700945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
Isoform_181554_166	chr8	+	963	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	19	518	19	5	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTGTTGGTGTGTGTT	NA	False	NA	18	True	AATAAA	-18	NA	85696258	85700945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
Isoform_181555_27	chr8	+	1398	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	83	19	0	-19	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGAGTTCAAGTTTGCG	NA	False	NA	NA	False	AATAAA	-18	NA	85696322	85701444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
Isoform_181570_30	chr8	+	2371	16	FSM	ENSMUSG00000052566.9	ENSMUST00000210326.2	3080	16	-13	722	12	-722	multi-exon	FALSE	canonical	3	335	junction_11	30.1194658356058	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717257	85725613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832
Isoform_181572_427	chr8	+	2592	22	FSM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	-16	4	-2	2	multi-exon	FALSE	canonical	3	335	junction_11	39.7071479254288	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717229	85729974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
Isoform_181578_80	chr8	+	2589	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	2	0	intron_retention	TRUE	canonical	3	109	junction_18	72.710434300971	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85717233	85729978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
Isoform_181580_84	chr8	+	2561	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	12	2	intron_retention	FALSE	canonical	3	109	junction_18	72.710434300971	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717257	85729974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
Isoform_181583_17	chr8	+	2793	21	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-5	2	intron_retention	FALSE	canonical	3	335	junction_11	39.5465232352984	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717226	85729974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
Isoform_181591_496	chr8	+	852	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	49	1	49	-1	multi-exon	FALSE	canonical	3	920	junction_1	163	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGCTTGGTTTATCT	NA	False	NA	20	True	AGTAAA	-20	NA	85753500	85756914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85753864_85756167_85756246_85756503
Isoform_181592_317	chr8	+	903	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	920	junction_1	163	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753450	85756915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85753864_85756167_85756246_85756503
Isoform_181597_15	chr8	+	969	3	NNC	ENSMUSG00000041203.10	novel	902	3	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	617	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753500	85756915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_85753864_85756051_85756246_85756503
Isoform_181598_32	chr8	+	3166	2	NIC	ENSMUSG00000041203.10	novel	902	3	NA	NA	39	-1	intron_retention	FALSE	canonical	3	1246	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGCTTGGTTTATCT	NA	False	NA	20	True	AGTAAA	-20	NA	85753490	85756914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85756246_85756503
Isoform_181599_11	chr8	+	3199	2	NIC	ENSMUSG00000041203.10	novel	902	3	NA	NA	7	0	intron_retention	FALSE	canonical	3	1246	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753458	85756915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85756246_85756503
Isoform_1816_8	chr10	-	2643	6	ISM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	58	53709	4	2021	5prime_fragment	FALSE	canonical	3	159	junction_3	17.7696370249929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATATC	NA	False	NA	NA	False	NA	NA	NA	30476687	30463929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
Isoform_181601_25	chr8	+	4857	25	FSM	ENSMUSG00000031691.15	ENSMUST00000093360.12	4863	25	6	0	6	0	multi-exon	FALSE	canonical	3	89	junction_1	89.272513111384	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763549	85784209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181603_70	chr8	+	4827	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	70.9023193477399	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763549	85784209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181606_48	chr8	+	4822	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	3	102	junction_20	83.055035301232	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85763542	85784210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181609_105	chr8	+	4784	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	140	junction_1	62.568282144834	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763549	85784209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181610_9	chr8	+	4912	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-121	1	combination_of_known_splicesites	TRUE	canonical	3	140	junction_1	62.568282144834	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85763422	85784210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181611_25	chr8	+	4924	25	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	92.5778951298131	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763796	85784209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181616_99	chr8	+	4866	25	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	75.1550134167154	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763824	85784209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181617_7	chr8	+	4943	25	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	-48	1	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	75.1550134167154	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85763748	85784210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181618_17	chr8	+	4863	25	FSM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	19	2	19	1	multi-exon	FALSE	canonical	3	53	junction_1	94.0795227306252	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85763815	85784210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181623_55	chr8	+	4833	25	FSM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	19	-1911	19	1	multi-exon	FALSE	canonical	3	53	junction_1	77.0544540496452	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85763815	85784210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181632_8	chr8	+	3397	12	ISM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	13042	3	2	0	3prime_fragment	FALSE	canonical	3	102	junction_7	93.6253303296647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85776838	85784209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181633_13	chr8	+	3371	12	ISM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	13041	-1913	1	0	3prime_fragment	FALSE	canonical	3	333	junction_7	40.6030980375628	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85776837	85784212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_181645_100	chr8	+	1835	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	70	2	28	2	multi-exon	FALSE	canonical	3	54	junction_4	11.5864970366477	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGTGTGAGCTTTCT	NA	False	NA	20	True	AATAAA	-20	NA	85786753	85793748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
Isoform_181646_17	chr8	+	1875	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	28	4	-14	0	multi-exon	TRUE	canonical	3	54	junction_4	11.5864970366477	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGAGTGTGAGCTTT	NA	False	NA	18	True	AATAAA	-18	NA	85786711	85793746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
Isoform_181647_25	chr8	+	1923	9	FSM	ENSMUSG00000008167.15	ENSMUST00000139721.8	1993	9	65	5	24	2	multi-exon	FALSE	canonical	3	68	junction_1	8.18535277187245	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGTGTGAGCTTTCT	NA	False	NA	20	True	AATAAA	-20	NA	85786749	85793748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
Isoform_181649_3	chr8	+	2024	8	NIC	ENSMUSG00000008167.15	novel	1993	9	NA	NA	24	0	intron_retention	FALSE	canonical	3	68	junction_1	8.0483234405733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGAGTGTGAGCTTT	NA	False	NA	18	True	AATAAA	-18	NA	85786749	85793746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85792449_85792599_85792684_85792992_85793073_85793140_85793218
Isoform_181651_324	chr8	+	1312	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	21	0	-18	0	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	23	True	AATAAA	-29	NA	85798406	85801791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
Isoform_181653_7	chr8	+	2010	8	NIC	ENSMUSG00000060038.15	novel	1333	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	210	junction_2	33.4621321154867	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	23	True	AATAAA	-29	NA	85798386	85801791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85798683_85799080_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
Isoform_181654_10	chr8	+	1265	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	466	0	-78	0	3prime_fragment	FALSE	canonical	3	191	junction_1	37.2788718406859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	23	True	AATAAA	-29	NA	85798851	85801791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
Isoform_181656_303	chr8	+	682	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	230	10	-3	-3	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGCACTGTTGCTTC	NA	False	NA	26	True	TATAAA	-15	NA	85807598	85808958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
Isoform_181657_10	chr8	+	914	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	6	2	6	-2	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTGCTTCTCTTTTGT	NA	False	NA	34	True	TATAAA	-23	NA	85807374	85808966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
Isoform_181659_22	chr8	+	792	3	FSM	ENSMUSG00000059355.14	ENSMUST00000148592.2	798	3	-4	10	-4	-3	multi-exon	FALSE	canonical	3	590	junction_2	13.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGCACTGTTGCTTC	NA	False	NA	26	True	TATAAA	-15	NA	85807597	85808958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85807908_85808405_85808504_85808574
Isoform_181662_6	chr8	+	3473	23	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	-1	697	-1	-697	intron_retention	FALSE	canonical	3	158	junction_7	30.5902336815889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809942	85824214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580
Isoform_181663_462	chr8	+	3125	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	1	696	1	-696	multi-exon	FALSE	canonical	3	158	junction_7	31.1019422681999	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809944	85824215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
Isoform_181667_20	chr8	+	3050	23	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	4	-696	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	54.501876531497	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809902	85824215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
Isoform_181668_21	chr8	+	3023	23	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1	-695	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	54.9261901431035	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTCACCCAGTGCACTA	NA	False	NA	15	True	ATTAAA	-17	NA	85809944	85824216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85810118_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
Isoform_18168_31	chr11	-	5278	18	FSM	ENSMUSG00000020802.9	ENSMUST00000082152.5	5205	18	-7	-66	-7	66	multi-exon	FALSE	canonical	2	105	junction_3	24.8790847526891	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTGATGTTGCTGTC	7458	False	NA	0	True	ATTAAA	-18	NA	116472280	116428499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
Isoform_181682_791	chr8	+	1168	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	122	-3	-10	3	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTATGAGTATTTT	NA	False	NA	12	True	AATAAA	-20	NA	86026541	86034703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_181684_104	chr8	+	1458	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	-172	1	-13	0	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026247	86034699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_181688_104	chr8	+	1001	6	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	109	junction_2	378.03089820807	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026541	86034700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_86026622_86027737_86027868_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_181690_46	chr8	+	2720	6	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-9	0	intron_retention	FALSE	canonical	3	972	junction_2	56.9160785718763	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026542	86034699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_86026622_86027737_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_181695_65	chr8	+	1040	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	224	202	-10	5	multi-exon	FALSE	canonical	3	116	junction_1	361.716463545689	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTATGAGTATTTTGC	NA	False	NA	14	True	AATAAA	-22	NA	86026541	86034705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_181697_22	chr8	+	870	5	NIC	ENSMUSG00000031697.13	novel	1466	6	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	431.436264122524	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026541	86034699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_86026622_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_1817_3	chr10	-	716	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	-58	217	-58	-9	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGAACTGTTGGTTTG	NA	False	NA	-7	True	AATAAA	-33	NA	30494533	30484353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
Isoform_181709_1150	chr8	+	3635	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	False	NA	13	True	AATAAA	-19	NA	86219208	86254189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
Isoform_18171_202	chr11	-	5244	18	FSM	ENSMUSG00000020802.9	ENSMUST00000082152.5	5205	18	-40	1	-40	-1	multi-exon	FALSE	canonical	2	105	junction_3	24.8790847526891	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGGGGGAGTTGG	7425	False	NA	0	True	ATTAAA	-18	NA	116472313	116428566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
Isoform_181714_130	chr8	+	3661	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	-22	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	False	NA	13	True	AATAAA	-19	NA	86219182	86254189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
Isoform_181749_9	chr8	+	4583	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	24.7210030475169	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567618	86787271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_86567687_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_181750_8	chr8	+	4567	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	24.5815764788433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567617	86787271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_86567687_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_181751_48	chr8	+	4599	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	18	734	4	1	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567648	86787271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_181753_40	chr8	+	4630	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	-13	734	-2	1	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567617	86787271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_181757_4	chr8	+	4651	33	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	32.5882815403022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567636	86787270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_86567733_86569649_86569742_86575302_86575361_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_181758_18	chr8	+	4620	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	21.9062423691205	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATGTCTGCTTTCCAAT	NA	False	NA	11	True	NA	NA	NA	86567612	86787273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_181759_24	chr8	+	4520	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.2166379903478	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567617	86787270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_86567733_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_181764_130	chr8	+	2410	13	FSM	ENSMUSG00000047866.21	ENSMUST00000122188.10	2371	13	-35	-4	27	3	multi-exon	TRUE	non_canonical	0	0	junction_3	73.1522385166715	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTCTCCAGTGGGTT	NA	False	NA	NA	False	AATAAA	-16	NA	87350698	87443263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_87351045_87358013_87358249_87360496_87360560_87364600_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
Isoform_181768_468	chr8	+	2836	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	27	-4	27	3	multi-exon	FALSE	canonical	3	174	junction_5	34.038693468775	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTCTCCAGTGGGTT	NA	False	NA	NA	False	AATAAA	-16	NA	87350698	87443263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
Isoform_181773_11	chr8	+	608	5	NIC	ENSMUSG00000097248.10	novel	682	4	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	79.1023861839831	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	177	False	NA	7	True	AATAAA	-15	NA	88199418	88252182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_88199589_88240436_88240525_88248363_88248442_88250923_88251056_88252042
Isoform_181774_3	chr8	+	703	4	FSM	ENSMUSG00000097248.10	ENSMUST00000181159.8	682	4	-23	2	-23	0	multi-exon	FALSE	canonical	3	13	junction_3	80.2509951478623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAGTGTGTCCATTCCTC	175	False	NA	5	True	AATAAA	-13	NA	88199416	88252180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88251859
Isoform_181775_43	chr8	+	522	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182174.8	498	4	-23	-1	-23	0	multi-exon	FALSE	canonical	3	132	junction_1	31.0590834807897	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	175	False	NA	7	True	AATAAA	-15	NA	88199416	88252182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88252042
Isoform_181776_3	chr8	+	1126	2	NIC	ENSMUSG00000097248.10	novel	1303	2	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTTGTGCAGGATGTC	210	False	NA	NA	False	AATAAA	-17	NA	88199744	88230601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_88199859_88229589
Isoform_181777_5	chr8	+	544	5	NIC	ENSMUSG00000097248.10	novel	432	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	86.1434124004848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAGTGTGTCCATTCCTC	216	False	NA	5	True	AATAAA	-13	NA	88199750	88252180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_88199859_88240436_88240525_88248363_88248442_88250923_88251056_88252042
Isoform_181778_21	chr8	+	445	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182758.2	447	4	2	0	2	0	multi-exon	FALSE	canonical	3	44	junction_1	69.6866000191014	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	229	False	NA	7	True	AATAAA	-15	NA	88199763	88252182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88199859_88248363_88248442_88250923_88251056_88252042
Isoform_181779_3	chr8	+	2217	4	FSM	ENSMUSG00000036810.17	ENSMUST00000121097.8	2209	4	-13	5	0	-5	multi-exon	FALSE	canonical	3	147	junction_2	27.6526068692749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAAGCTGCTTTGTGTGGT	NA	False	NA	12	True	NA	NA	NA	88845414	88858310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322
Isoform_181780_12	chr8	+	1363	6	NIC	ENSMUSG00000036810.17	novel	1731	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	70.6070817977914	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTTGTGTGGTTTAT	NA	False	NA	16	True	NA	NA	NA	88845396	88858314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88857363
Isoform_181781_123	chr8	+	1733	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	1	-3	1	-1	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTGGTTAGAGATTTTC	NA	False	NA	12	True	AATAAA	-14	NA	88845397	88861737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
Isoform_181786_5	chr8	+	1811	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	0	-80	0	76	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTAACTCCAAATTAGAT	NA	False	NA	89	True	AATAAA	-22	NA	88845396	88861814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
Isoform_181788_4	chr8	+	1658	5	FSM	ENSMUSG00000036810.17	ENSMUST00000127490.8	1643	5	-17	2	1	2	multi-exon	FALSE	canonical	3	5	junction_2	72.261244799685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTGGTTAGAGATTTT	NA	False	NA	11	True	AATAAA	-13	NA	88845397	88861736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88845498_88846407_88846480_88856322_88856433_88856974_88857030_88860415
Isoform_181791_718	chr8	+	3162	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	3	86	2	-56	multi-exon	FALSE	canonical	3	239	junction_7	19.6926641267291	718	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88864485	88898569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
Isoform_181800_13	chr8	+	4640	13	FSM	ENSMUSG00000036779.13	ENSMUST00000119033.8	4624	13	-16	0	-16	0	multi-exon	FALSE	canonical	3	15	junction_1	34.7235110871902	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	14	True	AGTAAA	-15	NA	88925824	88986350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88925942_88926558_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
Isoform_181801_3	chr8	+	4605	13	FSM	ENSMUSG00000036779.13	ENSMUST00000118952.8	4597	13	-10	2	-9	-2	multi-exon	FALSE	canonical	1	6	junction_1	36.9785035151806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTAGTTTGCCTGCTCA	NA	False	NA	12	True	AGTAAA	-13	NA	88925831	88986348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_88925942_88926584_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
Isoform_181802_42	chr8	+	4527	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.4717219141608	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTGCCTGCTCAT	NA	False	NA	13	True	AGTAAA	-14	NA	88925838	88986349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_88925942_88926656_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
Isoform_181804_3	chr8	+	4405	12	NNC	ENSMUSG00000036779.13	novel	4489	12	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	48.5095202379802	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTTAGTTTGCCTG	NA	False	NA	8	True	AGTAAA	-9	NA	88925826	88986344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_88925942_88926656_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
Isoform_181805_29	chr8	+	4530	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.4849676057116	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTGCCTGCTCAT	NA	False	NA	13	True	AGTAAA	-14	NA	88925838	88986349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
Isoform_181806_10	chr8	+	4396	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	44.0286365145837	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTTTAGTTTGCCTGC	NA	False	NA	9	True	AGTAAA	-10	NA	88925827	88986345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
Isoform_181808_66	chr8	+	4887	12	ISM	ENSMUSG00000036779.13	ENSMUST00000118952.8	4597	13	349	4	349	2	3prime_fragment	FALSE	canonical	3	98	junction_5	15.7967461865615	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88926190	88986346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
Isoform_18181_307	chr11	-	3655	19	FSM	ENSMUSG00000020806.16	ENSMUST00000103029.10	3593	19	-65	3	-18	1	multi-exon	FALSE	canonical	2	65	junction_12	15.7409586041568	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGCCTTTTGCCTTA	NA	False	NA	-18	True	ATTAAA	-16	NA	116515091	116488993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
Isoform_181811_5	chr8	+	3718	12	ISM	ENSMUSG00000036779.13	ENSMUST00000118952.8	4597	13	288	1234	288	1077	3prime_fragment	FALSE	canonical	3	98	junction_5	15.7967461865615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGATTTTTGTATTGCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	88926129	88985116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
Isoform_181817_7	chr8	+	1763	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	-20	1292	-20	-11	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTGGGGATCATGTAAC	NA	False	NA	NA	False	AGTAAA	-13	NA	89247961	89318954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
Isoform_181818_8	chr8	+	1738	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	5	1292	5	-11	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTGGGGATCATGTAAC	NA	False	NA	NA	False	AGTAAA	-13	NA	89247986	89318954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
Isoform_181819_3	chr8	+	1727	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	-47	1355	-47	-74	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTAGCCAGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	89247934	89318891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
Isoform_181820_4	chr8	+	4601	13	FSM	ENSMUSG00000055994.16	ENSMUST00000118370.8	4653	13	50	2	-19	-2	multi-exon	TRUE	canonical	0	0	junction_7	1.42156017576933	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTTACTGAAGCTCT	NA	False	NA	NA	False	TATAAA	-20	NA	89373992	89415100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_89374038_89379492_89379960_89387166_89387273_89390325_89392142_89397038_89397123_89397290_89397375_89399302_89399387_89401533_89401618_89402074_89402159_89408241_89408326_89411073_89411158_89413257_89413924_89414187
Isoform_181821_7	chr8	+	4669	18	FSM	ENSMUSG00000036712.16	ENSMUST00000211554.2	4638	18	1	-32	1	32	multi-exon	FALSE	canonical	3	5	junction_1	16.8699483019167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTACTCCTTGGTTTTA	NA	False	NA	40	True	TATAAA	-22	NA	89423675	89475115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_89423728_89428932_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
Isoform_181824_24	chr8	+	4532	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	-26	-30	2	30	multi-exon	FALSE	canonical	3	35	junction_1	10.7172466146861	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACTTTACTCCTTGGTTT	NA	False	NA	38	True	TATAAA	-20	NA	89423676	89475113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
Isoform_181828_3	chr8	+	2885	15	NIC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-1	-15	combination_of_known_junctions	TRUE	canonical	3	18	junction_6	14.0152977645347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGGATATGAAATCATT	NA	False	NA	NA	False	AATAAA	-16	NA	89423673	89474009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
Isoform_181830_5	chr8	+	2259	6	ISM	ENSMUSG00000056608.15	ENSMUST00000109614.9	11565	40	36	77557	15	1	5prime_fragment	FALSE	canonical	2	7	junction_2	4.75815090134813	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATGCAGAAGATGCA	NA	False	NA	15	True	NA	NA	NA	91555498	91703579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_91555543_91576261_91576388_91658876_91660491_91683010_91683343_91699752_91699865_91703548
Isoform_181831_4	chr8	+	3691	4	ISM	ENSMUSG00000056608.15	ENSMUST00000209203.2	9213	37	109887	-1847	50668	2	3prime_fragment	FALSE	canonical	3	23	junction_2	6.23609564462324	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGATGTCAGCCTCCCTC	9679	False	NA	6	True	ATTAAA	-17	NA	91768858	91781138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_91768908_91769469_91769599_91775733_91775839_91777730
Isoform_181832_47	chr8	+	4908	22	FSM	ENSMUSG00000031666.16	ENSMUST00000034091.8	4925	22	16	1	3	1	multi-exon	FALSE	canonical	3	13	junction_12	4.6442610819949	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCTGTTTAGTTATATT	NA	False	NA	NA	False	AATAAA	-14	NA	91796700	91850471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
Isoform_181835_9	chr8	+	4728	8	FSM	ENSMUSG00000055932.16	ENSMUST00000128081.8	4707	8	-21	0	2	0	multi-exon	FALSE	canonical	3	202	junction_7	44.6025532352358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	NA	False	NA	NA	False	AATGAA	-11	NA	92040164	92252858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399
Isoform_181836_730	chr8	+	3532	9	FSM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	25	7	-8	-7	multi-exon	FALSE	canonical	3	202	junction_7	44.2492937796752	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTAAGAGCGTCCGTGCT	NA	False	NA	9	True	AATAAA	-17	NA	92040177	92395060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
Isoform_181838_16	chr8	+	3640	10	NNC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	118.783650203029	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTAAGAGCGTCCGTG	NA	False	NA	7	True	AATAAA	-15	NA	92040162	92395058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92228353_92228449_92249399_92249525_92392909
Isoform_18184_11	chr11	-	3504	18	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	29.3256386048927	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116515095	116488994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116490265_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
Isoform_181846_78	chr8	+	3060	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	18	0	18	0	multi-exon	FALSE	canonical	3	12	junction_9	5.63964143856288	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTGTTTTAGC	NA	False	NA	4	True	AATAAA	-19	NA	93553936	93580048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
Isoform_181847_12	chr8	+	2019	14	FSM	ENSMUSG00000033192.6	ENSMUST00000046290.3	2811	14	11	781	11	-325	multi-exon	TRUE	canonical	2	3	junction_10	2.47591952914324	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTCCACTGGTCAGCAA	NA	False	NA	NA	False	AATAAA	-16	NA	93581977	93645126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93641007_93644662
Isoform_18185_14	chr11	-	2230	9	FSM	ENSMUSG00000057286.7	ENSMUST00000079545.6	3643	9	12	1401	12	-815	multi-exon	TRUE	canonical	3	12	junction_5	7.34421541078419	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTTTTCCACATTTCC	NA	False	NA	1	True	AATAAA	-20	NA	116585682	116567529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116568508_116569291_116569392_116570732_116570817_116572684_116572789_116575171_116575311_116575922_116576092_116576661_116576837_116581137_116581199_116585262
Isoform_181851_183	chr8	+	5228	14	NNC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	45	junction_13	32.7128442284494	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGGTGGTAATTTATA	NA	False	NA	7	True	AATAAA	-17	NA	94763887	94794549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806_94792872_94792891
Isoform_181852_71	chr8	+	4376	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	33	901	-7	-901	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTATTGAAGATGGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	94763858	94793648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
Isoform_181859_7	chr8	+	5136	12	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	45.1189428983488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTATGGTGGTAATTTA	NA	False	NA	5	True	AATAAA	-15	NA	94763851	94794547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_94764071_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
Isoform_181861_9	chr8	+	397	3	FSM	ENSMUSG00000031760.10	ENSMUST00000034211.10	536	3	140	-1	1	1	multi-exon	FALSE	canonical	3	14	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAGACTGGTCTCTTTT	NA	False	NA	8	True	AATAAA	-18	NA	94879374	94880775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_94879459_94879652_94879719_94880528
Isoform_181862_3480	chr8	+	386	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	120	5	-76	-1	multi-exon	FALSE	canonical	3	13494	junction_2	132	3480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGCTTGTCTCTGTGCA	NA	False	NA	32	True	AATAAA	-18	NA	94899411	94900191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_94899504_94899754_94899821_94899963
Isoform_181863_1311	chr8	+	478	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	28	5	28	-1	multi-exon	FALSE	canonical	3	13494	junction_2	132	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGCTTGTCTCTGTGCA	NA	False	NA	32	True	AATAAA	-18	NA	94899319	94900191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_94899504_94899754_94899821_94899963
Isoform_181864_284	chr8	+	519	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	-13	5	-13	-1	multi-exon	FALSE	canonical	3	13494	junction_2	132	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGCTTGTCTCTGTGCA	NA	False	NA	32	True	AATAAA	-18	NA	94899278	94900191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_94899504_94899754_94899821_94899963
Isoform_18187_4	chr11	-	2946	8	NNC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	4	-818	intron_retention	FALSE	canonical	3	10	junction_3	7.67184090405574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGAGCTTTTCCACATT	NA	False	NA	-2	True	AATAAA	-17	NA	116585690	116567532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_116568508_116569291_116569392_116570732_116570916_116572684_116572789_116575171_116576092_116576661_116576837_116581137_116581199_116585262
Isoform_181877_5143	chr8	+	389	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	159	1	0	1	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	5143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGTTTTCTTGGTGTG	NA	False	NA	28	True	AATAAA	-17	NA	94905868	94906954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_94905967_94906450_94906517_94906729
Isoform_181879_418	chr8	+	553	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	-7	3	-7	-1	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGGTTTTCTTGGTG	NA	False	NA	26	True	AATAAA	-15	NA	94905702	94906952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_94905967_94906450_94906517_94906729
Isoform_181885_149	chr8	+	2736	23	FSM	ENSMUSG00000032939.15	ENSMUST00000212824.2	2928	23	-18	210	6	-4	multi-exon	FALSE	canonical	3	35	junction_1	328.081966678305	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTCTTTTTCCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	94941210	95041484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
Isoform_181887_3950	chr8	+	2686	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	19	2	6	-2	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	3950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCTTTTTCCTTTTTT	NA	False	NA	24	True	AATAAA	-25	NA	94941210	95041486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
Isoform_18189_28	chr11	-	1730	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	0	333	0	-333	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAAATATGGAGACCGG	6326	False	NA	-5	True	AATAAA	-23	NA	116718872	116694220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
Isoform_1819_57	chr10	-	625	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	36	214	36	-6	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAACTGTTGGTTTGTTC	NA	False	NA	-4	True	AATAAA	-36	NA	30494439	30484350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
Isoform_18191_7	chr11	-	2055	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	11	-3	11	3	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTTCTTAAACGTTCCT	6337	False	NA	NA	False	NA	NA	NA	116718861	116693884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
Isoform_181915_546	chr8	+	1883	8	FSM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	58	11	1	2	multi-exon	FALSE	canonical	3	396	junction_6	55.7864002152818	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATTGTCCTGGCAAGC	NA	False	NA	36	True	AATAAA	-29	NA	95113123	95121994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
Isoform_181916_111	chr8	+	1946	8	FSM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	-5	11	-5	2	multi-exon	FALSE	canonical	3	396	junction_6	55.7864002152818	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATTGTCCTGGCAAGC	NA	False	NA	36	True	AATAAA	-29	NA	95113060	95121994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
Isoform_181920_43	chr8	+	1886	8	FSM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	1	-14	1	-5	multi-exon	FALSE	canonical	3	44	junction_2	160.784175279808	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTGGCAAGCTTGCTG	NA	False	NA	42	True	AATAAA	-35	NA	95113123	95122000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
Isoform_181921_13	chr8	+	1947	8	FSM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	-64	-10	-7	4	multi-exon	FALSE	canonical	3	44	junction_2	160.784175279808	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGTCCTGGCAAGCTT	NA	False	NA	38	True	AATAAA	-31	NA	95113058	95121996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
Isoform_181926_10	chr8	+	2197	16	FSM	ENSMUSG00000034361.11	ENSMUST00000048653.10	2342	16	1	144	1	-3	multi-exon	FALSE	canonical	2	2	junction_4	2.64491125665032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGCTTTTTCTAAGTA	NA	False	NA	NA	False	AATAAA	-14	NA	95259618	95297015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95259822_95274955_95275174_95277797_95277978_95278367_95278443_95280017_95280090_95281302_95281387_95281557_95281648_95282136_95282236_95282599_95282687_95284047_95284108_95284752_95284887_95286736_95286792_95289365_95289418_95290584_95290719_95295218_95295456_95296598
Isoform_181929_24	chr8	+	3499	15	FSM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	-108	6	-7	-6	multi-exon	FALSE	canonical	3	30	junction_1	38.5556184529014	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTAAGATTTCACAGCT	8132	False	NA	2	True	AATAAA	-19	NA	95328585	95386897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95328733_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
Isoform_18193_8	chr11	-	1760	7	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	130.186298135488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734316	116728257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116728590_116729815_116729955_116730663_116730753_116731273_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_181938_45	chr8	+	3359	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	-22	515	-22	7	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGAATTGTTGACTCTG	8089	False	NA	15	True	AATAAA	-26	NA	95328542	95386388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
Isoform_18194_16	chr11	-	1621	7	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	130.186298135488	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734177	116728257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116728590_116729815_116729955_116730663_116730753_116731273_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_181941_101	chr8	+	3821	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	31	0	2	0	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTCACAGCTCTCATT	8142	False	NA	8	True	AATAAA	-25	NA	95328595	95386903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
Isoform_181942_50	chr8	+	3843	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	3	6	3	-6	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTAAGATTTCACAGCT	8114	False	NA	2	True	AATAAA	-19	NA	95328567	95386897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
Isoform_181945_253	chr8	+	1996	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	66	1	-57	-1	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTGATGTGCATTGTC	NA	False	NA	11	True	AGTAAA	-24	NA	95393293	95401052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
Isoform_181946_115	chr8	+	2023	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	39	1	39	-1	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTGATGTGCATTGTC	NA	False	NA	11	True	AGTAAA	-24	NA	95393266	95401052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
Isoform_181950_5	chr8	+	1909	5	NIC	ENSMUSG00000031776.18	novel	2063	6	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	103.791859025648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	False	NA	12	True	AGTAAA	-25	NA	95393295	95401053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_95393530_95394224_95394287_95396948_95397056_95398689_95398787_95399644
Isoform_181951_32	chr8	+	3118	3	FSM	ENSMUSG00000031778.14	ENSMUST00000034230.7	3315	3	195	2	0	-2	multi-exon	FALSE	canonical	2	8	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGGGAACTTTTCTCTG	2374	False	NA	NA	False	AATAAA	-22	NA	95498831	95509053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95498963_95504655_95504777_95506187
Isoform_181953_156	chr8	+	1697	9	FSM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	92	0	-2	0	multi-exon	FALSE	canonical	3	145	junction_5	12.7322179921646	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	False	NA	9	True	AATAAA	-15	NA	95565040	95581523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
Isoform_181954_4	chr8	+	1605	8	FSM	ENSMUSG00000031782.16	ENSMUST00000159871.4	831	8	-7	-767	-7	-4	multi-exon	FALSE	canonical	2	4	junction_5	58.5585351662448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTTCTTGTTGTTTTGT	NA	False	NA	5	True	AATAAA	-11	NA	95565023	95581519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95579742_95579899_95580232_95580287_95580741
Isoform_181955_3	chr8	+	2959	8	NIC	ENSMUSG00000031782.16	novel	1789	9	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	153	junction_1	10.2638656838206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTTGTTGTTTTGTCT	NA	False	NA	7	True	AATAAA	-13	NA	95565027	95581521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95578584_95579742_95579899_95580232_95580287_95580741
Isoform_181956_3	chr8	+	4117	7	NIC	ENSMUSG00000031782.16	novel	831	8	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	153	junction_1	10.5514611942296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATTTCTTGTTGTTTTG	NA	False	NA	4	True	AATAAA	-10	NA	95565025	95581518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95579899_95580232_95580287_95580741
Isoform_181958_2831	chr8	+	1177	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	72	331	4	170	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	2831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	NA	False	NA	27	True	AATAAA	-18	NA	95584149	95590539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
Isoform_18196_11	chr11	-	1652	7	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	131.15311238735	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734165	116728257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116728590_116729815_116729955_116730663_116730758_116731235_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_18197_10	chr11	-	1807	7	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	131.15311238735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734320	116728257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116728590_116729815_116729955_116730663_116730758_116731235_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_181971_7	chr8	+	3585	14	NIC	ENSMUSG00000031785.17	novel	3011	15	NA	NA	0	-23	intron_retention	FALSE	canonical	2	5	junction_2	18.2244390178352	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCCATGGCAAAGCAGC	681	False	NA	2	True	AATAAA	-15	NA	95703736	95740801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_95704046_95729066_95729142_95729863_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_181972_5	chr8	+	3422	14	NIC	ENSMUSG00000031785.17	novel	3616	14	NA	NA	196	7	intron_retention	FALSE	canonical	2	5	junction_2	18.2244390178352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCGTCTCAGTTTTGTT	877	False	NA	35	True	NA	NA	NA	95703932	95740834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_95704046_95729066_95729142_95729863_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_181973_151	chr8	+	3406	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	196	14	194	4	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCCGTCTCAGTTTT	875	False	NA	32	True	AATAAA	-45	NA	95703930	95740831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_181974_48	chr8	+	3439	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	161	16	159	2	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCCCGTCTCAGTT	840	False	NA	30	True	AATAAA	-43	NA	95703895	95740829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_181975_39	chr8	+	3597	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	1	18	1	0	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGTTGCCCGTCTCAG	680	False	NA	28	True	AATAAA	-41	NA	95703735	95740827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_181976_6	chr8	+	3654	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	-54	16	-54	2	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCCCGTCTCAGTT	625	False	NA	30	True	AATAAA	-43	NA	95703680	95740829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_181977_9	chr8	+	3516	14	FSM	ENSMUSG00000031785.17	ENSMUST00000093271.8	3574	14	55	3	-44	0	multi-exon	FALSE	canonical	1	2	junction_1	19.2826991162311	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGAGAGTTGCCCGTCT	7998	False	NA	25	True	AATAAA	-38	NA	95711053	95740824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95711286_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_181979_5	chr8	+	2771	9	ISM	ENSMUSG00000031785.17	ENSMUST00000093271.8	3574	14	21561	5	-215	-2	3prime_fragment	FALSE	canonical	3	57	junction_1	4.89897948556636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGGAGAGTTGCCCGT	NA	False	NA	23	True	AATAAA	-36	NA	95732559	95740822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_181980_141	chr8	+	2546	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	78	1153	78	-1153	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATGAGAGGAATA	887	False	NA	13	True	ATTAAA	-17	NA	95807891	95825686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
Isoform_181981_11	chr8	+	2610	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	15	1152	15	-1152	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTTATGAGAGGAATAT	824	False	NA	14	True	ATTAAA	-18	NA	95807828	95825687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
Isoform_181986_15	chr8	+	1732	7	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	78.3212756677406	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTGTCTTATTTTAAA	NA	False	NA	13	True	AATAAA	-14	NA	96058919	96074136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96059075_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
Isoform_181987_469	chr8	+	1739	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	19	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	19.6185852927495	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	12	True	AATAAA	-13	NA	96058930	96074135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
Isoform_181989_24	chr8	+	2092	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	-333	-1	-333	1	multi-exon	FALSE	canonical	3	182	junction_6	19.6185852927495	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTGTCTTATTTTAAA	NA	False	NA	13	True	AATAAA	-14	NA	96058578	96074136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
Isoform_18199_9	chr11	-	1445	5	ISM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	567	0	-162	0	3prime_fragment	FALSE	canonical	3	250	junction_2	32.8252951243397	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116733708	116728257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157
Isoform_181993_94	chr8	+	4346	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	2	787	2	-787	multi-exon	FALSE	canonical	3	26	junction_5	7.43531778858738	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTCTACAGGGGCAG	NA	False	NA	8	True	AATAAA	-17	NA	96078897	96100921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
Isoform_181995_3	chr8	+	5155	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	-32	12	-32	-12	multi-exon	FALSE	canonical	3	26	junction_5	7.43531778858738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACATTCA	NA	False	NA	NA	False	NA	NA	NA	96078863	96101696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
Isoform_181998_3	chr8	+	3382	4	ISM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	17854	11	251	-11	3prime_fragment	FALSE	canonical	3	35	junction_1	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACATTCAG	NA	False	NA	NA	False	NA	NA	NA	96096749	96101697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_96096900_96097323_96097475_96097633_96097750_96098732
Isoform_181999_3	chr8	+	2846	4	ISM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	17612	789	9	-789	3prime_fragment	FALSE	canonical	3	35	junction_1	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTGTCTACAGGGGC	NA	False	NA	6	True	AATAAA	-15	NA	96096507	96100919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_96096900_96097323_96097475_96097633_96097750_96098732
Isoform_18200_27	chr11	-	1419	5	ISM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	593	0	-136	0	3prime_fragment	FALSE	canonical	3	250	junction_2	32.8252951243397	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116733682	116728257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157
Isoform_182000_6	chr8	+	1259	9	FSM	ENSMUSG00000036598.5	ENSMUST00000041569.5	1288	9	26	3	26	-3	multi-exon	FALSE	canonical	2	7	junction_1	2.77263412660235	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGGGTCCTCTCACTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	96260738	96285515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96260901_96263092_96263220_96264719_96264882_96267426_96267583_96269249_96269331_96272521_96272678_96277824_96277933_96283818_96283975_96285364
Isoform_182001_8	chr8	+	2554	2	FSM	ENSMUSG00000031669.11	ENSMUST00000212434.2	654	2	-47	-1853	-47	1853	multi-exon	FALSE	canonical	3	101	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	96360134	96366714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96360412_96364437
Isoform_182002_151	chr8	+	2463	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	57	-1	-44	1	multi-exon	FALSE	canonical	3	97	junction_2	2	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTGTCACTAACTGT	NA	False	NA	NA	False	AATAAA	-15	NA	96360137	96371689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96360412_96364437_96364672_96369734
Isoform_182007_5	chr8	+	2827	16	NIC	ENSMUSG00000036564.18	novel	713	11	NA	NA	-279	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	8.44169545898347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGTCGTGTTTCCTA	NA	False	NA	7	True	AATAAA	-12	NA	96404433	96441582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96404500_96423821_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
Isoform_182009_29	chr8	+	2742	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	-5	1	-5	-1	multi-exon	FALSE	canonical	3	13	junction_5	6.1711295754251	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGTCGTGTTTCCTAT	NA	False	NA	8	True	AATAAA	-13	NA	96429685	96441583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
Isoform_18201_116	chr11	-	1710	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	-42	0	-42	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734317	116728257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_182010_17	chr8	+	2783	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	-45	0	-19	0	multi-exon	FALSE	canonical	3	13	junction_5	6.1711295754251	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	False	NA	9	True	AATAAA	-14	NA	96429645	96441584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
Isoform_182011_18	chr8	+	1358	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	132.221720353856	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGTTCAAACTTTCTT	NA	False	NA	33	True	AATAAA	-20	NA	96442544	96445632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96442592_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
Isoform_182014_19	chr8	+	1608	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-8	-10	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	127.266998428064	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGAGAAGTTCAAACTT	NA	False	NA	29	True	AATAAA	-16	NA	96442534	96445628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443607_96444548_96444730_96444820_96444964_96445103
Isoform_182015_426	chr8	+	1670	7	FSM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	32	5	-2	-5	multi-exon	FALSE	canonical	3	236	junction_4	62.8342175004105	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCAAACTTTCTTT	NA	False	NA	34	True	AATAAA	-21	NA	96442540	96445633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
Isoform_18202_328	chr11	-	1559	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	109	0	15	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734166	116728257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_182020_63	chr8	+	2551	6	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	282	junction_1	51.2312404690732	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	36	True	AATAAA	-23	NA	96442540	96445635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96444730_96444820_96444964_96445103
Isoform_182023_20	chr8	+	2660	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	0	-4	intron_retention	FALSE	canonical	3	282	junction_1	51.8338692362436	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	35	True	AATAAA	-22	NA	96442542	96445634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96442899_96442980_96443430_96443548_96444730_96444820_96444964_96445103
Isoform_182027_21	chr8	+	2618	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	13	-3	intron_retention	FALSE	canonical	3	305	junction_1	43.5280082245903	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	36	True	AATAAA	-23	NA	96442555	96445635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96443123_96443234_96443430_96443548_96444730_96444820_96444964_96445103
Isoform_182031_22	chr8	+	2743	4	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	0	-3	intron_retention	FALSE	canonical	3	362	junction_1	30.2140511829991	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	36	True	AATAAA	-23	NA	96442542	96445635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96443430_96443548_96444730_96444820_96444964_96445103
Isoform_182033_8	chr8	+	1745	4	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-2	-3	intron_retention	FALSE	canonical	2	11	junction_1	183.714149941938	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	36	True	AATAAA	-23	NA	96442540	96445635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96443430_96444548_96444730_96444820_96444964_96445103
Isoform_182036_36	chr8	+	2954	2	NIC	ENSMUSG00000031671.12	novel	774	4	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	428	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGTTCAAACTTTCTT	NA	False	NA	33	True	AATAAA	-20	NA	96442538	96445632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96444964_96445103
Isoform_182039_3	chr8	+	3851	3	NNC	ENSMUSG00000054400.17	novel	737	3	NA	NA	2	-341	intron_retention	FALSE	non_canonical	0	0	junction_2	141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTTAATGGCTTCAT	4815	False	NA	NA	False	NA	NA	NA	104977515	104987577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_104977728_104983916_104984588_104984609
Isoform_182040_54	chr8	+	632	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	33	2	2	1	multi-exon	FALSE	canonical	3	233	junction_3	21.1397466609439	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTGCAGATCTCC	4825	False	NA	8	True	ATTAAA	-20	NA	104977525	104990077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
Isoform_182042_3	chr8	+	1605	6	FSM	ENSMUSG00000031875.8	ENSMUST00000212081.2	850	6	-33	-722	-33	0	multi-exon	FALSE	canonical	0	0	junction_1	15.7784663386528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	13	True	ATTAAA	-15	NA	105066916	105074304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105066992_105067311_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
Isoform_182043_3	chr8	+	1560	6	NIC	ENSMUSG00000031875.8	novel	1616	5	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	15.4090882274066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGGAGTGCGCCTGAC	NA	False	NA	12	True	ATTAAA	-14	NA	105067112	105074303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_105067144_105067311_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
Isoform_182044_17	chr8	+	1603	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	13	0	13	0	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	13	True	ATTAAA	-15	NA	105067238	105074304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
Isoform_182045_24	chr8	+	1535	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	81	0	-41	0	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	13	True	ATTAAA	-15	NA	105067306	105074304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
Isoform_182047_4	chr8	+	2083	6	NNC	ENSMUSG00000031875.8	novel	1616	5	NA	NA	-37	574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.7784663386528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACAGTATTCATTAGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	105067310	105074878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363_105073750_105073771
Isoform_182052_66	chr8	+	5661	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	22	9	22	-9	multi-exon	FALSE	canonical	3	69	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAATTTGGCTTCCT	NA	False	NA	NA	False	AATAAA	-7	NA	105318104	105325649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105318228_105320111
Isoform_182053_33	chr8	+	2813	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	63	7	-7	1	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGTCATGACTCTTT	3809	False	NA	75	True	ATTAAA	-15	NA	105897368	105944614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
Isoform_182056_8	chr8	+	2321	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	-18	580	-18	-572	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGATAAGGATTGTGTTT	3728	False	NA	38	True	AATAAA	-27	NA	105897287	105944041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
Isoform_182058_39	chr8	+	2602	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	281	0	10	0	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	4027	False	NA	82	True	ATTAAA	-22	NA	105897586	105944621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
Isoform_182059_6	chr8	+	2901	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	-25	7	-25	1	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGTCATGACTCTTT	3721	False	NA	75	True	ATTAAA	-15	NA	105897280	105944614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
Isoform_18206_11	chr11	-	1687	6	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	113.206713581837	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734332	116728257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116728590_116729815_116729955_116731273_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_182066_47	chr8	+	2637	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	254	0	-2	0	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTCATGACTCTT	4015	False	NA	74	True	ATTAAA	-14	NA	105897574	105944613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
Isoform_182067_10	chr8	+	2926	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	-30	-5	-15	-3	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCATGACTCTTTATTG	3731	False	NA	79	True	ATTAAA	-19	NA	105897290	105944618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
Isoform_182068_37	chr8	+	2839	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	53	-1	-2	1	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGTCATGACTCTTT	3814	False	NA	75	True	ATTAAA	-15	NA	105897373	105944614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
Isoform_182076_40	chr8	+	2961	16	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-21	-5	combination_of_known_junctions	TRUE	canonical	3	12	junction_12	66.0092922751537	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGAGCTGTTGATT	NA	False	NA	NA	False	NA	NA	NA	105951816	105979680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105975960_105976095_105976228_105976288_105977350_105977424_105978229
Isoform_182079_641	chr8	+	2869	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	44	3	-17	-3	multi-exon	FALSE	canonical	3	239	junction_9	14.7126551724093	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGAGCTGTTGATTTC	NA	False	NA	NA	False	NA	NA	NA	105951820	105979682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
Isoform_182088_7	chr8	+	1858	3	FSM	ENSMUSG00000033313.12	ENSMUST00000036221.12	1901	3	37	6	3	-6	multi-exon	FALSE	canonical	1	1	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTCCTGTGATCTCGAG	1567	False	NA	NA	False	AATAAA	-14	NA	105991316	105995952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_105991393_105993326_105993798_105994641
Isoform_182089_6	chr8	+	1592	3	NNC	ENSMUSG00000033313.12	novel	1901	3	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTCCTGTGATCTCGAG	1558	False	NA	NA	False	AATAAA	-14	NA	105991307	105995952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_105991393_105993601_105993798_105994641
Isoform_182091_57	chr8	+	2052	9	ISM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	36	0	-18	0	intron_retention	FALSE	canonical	0	0	junction_3	391.220126655058	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024330	106032002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064
Isoform_182092_1868	chr8	+	1957	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	36	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_3	369.398142461925	1868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024330	106032002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
Isoform_182093_533	chr8	+	1985	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	8	0	8	0	multi-exon	TRUE	canonical	0	0	junction_3	369.398142461925	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024302	106032002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
Isoform_1821_7	chr10	-	5797	5	FSM	ENSMUSG00000111080.2_ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	18	-4940	18	-6	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACATTTTTAGTGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	30494457	30479196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
Isoform_182108_56	chr8	+	2407	20	FSM	ENSMUSG00000014791.11	ENSMUST00000109375.4	3189	20	-1	783	-1	0	multi-exon	FALSE	canonical	2	9	junction_11	6.90778195396653	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTTAAATCAGCTC	NA	False	NA	6	True	AATAAA	-17	NA	106032239	106036609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
Isoform_182109_10	chr8	+	2300	19	NIC	ENSMUSG00000014791.11	novel	3189	20	NA	NA	-7	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	8.12403840463596	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCTCTGAACCTGTGG	NA	False	NA	17	True	AATAAA	-28	NA	106032225	106036620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
Isoform_182110_16	chr8	+	2367	19	FSM	ENSMUSG00000014791.11	ENSMUST00000212033.2	2351	19	-5	-11	-1	11	multi-exon	FALSE	canonical	1	1	junction_3	8.33425920782464	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCTCTGAACCTGTGG	NA	False	NA	17	True	AATAAA	-28	NA	106032239	106036620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
Isoform_182112_10	chr8	+	988	4	ISM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	-11	-3	-11	0	intron_retention	FALSE	canonical	3	392	junction_2	12.9614813968157	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	274	False	NA	16	True	AATAAA	-18	NA	106053008	106055687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953
Isoform_182113_224	chr8	+	761	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	23	1	-11	1	multi-exon	FALSE	canonical	3	269	junction_4	56.0556865982391	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCGTGTGGGTGATGAT	274	False	NA	17	True	AATAAA	-19	NA	106053008	106055688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
Isoform_182114_20	chr8	+	808	6	FSM	ENSMUSG00000014856.13	ENSMUST00000153146.9	801	6	-6	-1	2	1	multi-exon	FALSE	canonical	3	25	junction_4	152.856010676715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCGTGTGGGTGATGAT	253	False	NA	17	True	AATAAA	-19	NA	106052987	106055688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055117_106055239_106055325_106055403
Isoform_182116_5	chr8	+	849	5	FSM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	48	-2	-19	-1	multi-exon	FALSE	canonical	3	392	junction_2	13.1909059582729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGCCGTGTGGGTGATG	49	False	NA	15	True	AATAAA	-17	NA	106053067	106055686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055325_106055403
Isoform_182117_3	chr8	+	4088	16	FSM	ENSMUSG00000014786.9	ENSMUST00000073149.7	3499	16	13	-602	13	-536	multi-exon	FALSE	canonical	0	0	junction_14	2.98589275687449	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCGTCCTCTGTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	106075487	106095977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106076205_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083602_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
Isoform_182118_5	chr8	+	4204	22	NIC	ENSMUSG00000014782.17	novel	3654	23	NA	NA	-51	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	4.15078606330303	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGTTGACTGGGCATATG	NA	False	NA	NA	False	AATAAA	-15	NA	106101484	106109485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106101614_106102095_106102488_106102647_106102744_106102821_106102946_106103051_106103146_106103225_106103301_106103380_106103498_106103668_106103768_106103856_106104006_106104170_106104310_106104398_106104516_106104931_106105115_106105312_106105819_106105886_106106134_106106754_106106845_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572_106108689_106108867
Isoform_182120_153	chr8	+	4092	22	FSM	ENSMUSG00000038604.10	ENSMUST00000043531.10	4108	22	11	5	11	-5	multi-exon	FALSE	canonical	3	65	junction_11	11.8587682955494	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTGTGTTTCCTACAT	2653	False	NA	2	True	NA	NA	NA	106331897	106348846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
Isoform_182121_3	chr8	+	4267	22	FSM	ENSMUSG00000038604.10	ENSMUST00000043531.10	4108	22	-164	5	-164	-5	multi-exon	FALSE	canonical	3	65	junction_11	11.8587682955494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTGTGTTTCCTACAT	2478	False	NA	2	True	NA	NA	NA	106331722	106348846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
Isoform_18213_188	chr11	-	1393	4	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_1	746.295890083521	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTCCTGGTCTTTTG	6004	False	NA	-8	True	ATTAAA	-28	NA	116743919	116740729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116741180_116741681_116741788_116742846_116743158_116743393
Isoform_182130_16	chr8	+	5013	11	ISM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	-57	1	-46	-1	intron_retention	FALSE	canonical	3	206	junction_10	76.5820475046208	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106363153	106409553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702
Isoform_182131_324	chr8	+	3838	12	FSM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	-57	1	-46	-1	multi-exon	FALSE	canonical	3	206	junction_10	73.0190736997323	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106363153	106409553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
Isoform_182133_22	chr8	+	3875	12	FSM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	-96	3	-85	-3	multi-exon	FALSE	canonical	3	206	junction_10	73.0190736997323	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGAAGACTCCGTCT	NA	False	NA	35	True	AATAAA	-18	NA	106363114	106409551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
Isoform_182138_49	chr8	+	3808	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-25	-4	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	123.55405013914	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTCTGAAGACTCCGTC	NA	False	NA	34	True	AATAAA	-17	NA	106363174	106409550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
Isoform_182144_347	chr8	+	3836	12	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	229	junction_10	67.2234463229697	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363153	106409554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
Isoform_182150_46	chr8	+	3809	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	120.768818152769	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363174	106409554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408072
Isoform_18216_69	chr11	-	2451	3	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	235	junction_1	770	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	6004	False	NA	-9	True	ATTAAA	-27	NA	116743919	116740730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116741180_116741681_116743158_116743393
Isoform_182168_15	chr8	+	4594	39	FSM	ENSMUSG00000050357.10	ENSMUST00000213019.2	4194	39	-350	-50	-350	6	multi-exon	TRUE	canonical	3	28	junction_20	8.5824984578148	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCGTGGAATACTGTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	106412555	106424825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
Isoform_182169_28	chr8	+	4396	39	FSM	ENSMUSG00000050357.10	ENSMUST00000213019.2	4194	39	-152	-50	-152	6	multi-exon	FALSE	canonical	3	28	junction_20	8.5824984578148	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCGTGGAATACTGTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	106412753	106424825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
Isoform_182171_5	chr8	+	4275	38	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-113	5	combination_of_known_junctions	FALSE	canonical	3	15	junction_36	9.80481538199191	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106412792	106424824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
Isoform_182172_4	chr8	+	4488	38	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-325	6	combination_of_known_junctions	FALSE	canonical	3	15	junction_36	9.80481538199191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCGTGGAATACTGTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	106412580	106424825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
Isoform_182174_38	chr8	+	1242	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212634.2	678	3	1	-565	1	-2	multi-exon	FALSE	canonical	0	0	junction_1	13	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTAGATGTGGTCCTTCT	NA	False	NA	6	True	ATTAAA	-12	NA	106427780	106430120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106427919_106428805_106429029_106429239
Isoform_182175_27	chr8	+	1238	3	NIC	ENSMUSG00000005699.17	novel	1234	3	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	12	True	ATTAAA	-18	NA	106427787	106430126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106427919_106428805_106429029_106429242
Isoform_182176_15	chr8	+	1278	3	FSM	ENSMUSG00000005699.17	ENSMUST00000098444.9	1273	3	-5	0	1	0	multi-exon	FALSE	canonical	2	20	junction_1	3	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106427780	106430125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106427950_106428805_106429029_106429239
Isoform_182177_21	chr8	+	1271	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212352.2	1234	3	-33	-4	0	1	multi-exon	FALSE	canonical	2	20	junction_1	6.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	12	True	ATTAAA	-18	NA	106427785	106430126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106427950_106428805_106429029_106429242
Isoform_182179_14	chr8	+	1256	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212430.2	1261	3	6	-1	6	1	multi-exon	FALSE	canonical	3	15	junction_1	9	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	12	True	ATTAAA	-18	NA	106428286	106430126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106428436_106428805_106429029_106429242
Isoform_182186_82	chr8	+	1994	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	24	-1070	-7	1070	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGGTCTCTTTATTCC	NA	False	NA	26	True	AATAAA	-13	NA	106587235	106607032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
Isoform_182187_981	chr8	+	878	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	77	-7	-8	7	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAATTGTTTTAATTAG	NA	False	NA	-1	True	AATAAA	-22	NA	106587288	106605969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
Isoform_182188_225	chr8	+	1941	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	77	-1070	-8	1070	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGGTCTCTTTATTCC	NA	False	NA	26	True	AATAAA	-13	NA	106587288	106607032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
Isoform_182189_600	chr8	+	931	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	24	-7	-7	7	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAATTGTTTTAATTAG	NA	False	NA	-1	True	AATAAA	-22	NA	106587235	106605969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
Isoform_182197_34	chr8	+	4734	29	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	28	-7	intron_retention	FALSE	canonical	3	40	junction_14	98.4644605936578	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3284	False	NA	7	True	ATTAAA	-14	NA	106607540	106619833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_182200_283	chr8	+	4749	29	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	10	-7	intron_retention	TRUE	canonical	3	128	junction_16	71.6479755328731	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3266	False	NA	7	True	ATTAAA	-14	NA	106607522	106619833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_182201_45	chr8	+	4682	29	NIC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	29	-7	intron_retention	FALSE	canonical	3	70	junction_18	95.2952112958378	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3285	False	NA	7	True	ATTAAA	-14	NA	106607541	106619833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_182202_577	chr8	+	4729	29	FSM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	30	21	30	-4	multi-exon	FALSE	canonical	3	268	junction_16	54.5128121057194	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTGTGTGATTTT	3286	False	NA	10	True	AATAAA	-2	NA	106607542	106619836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_182206_91	chr8	+	4679	29	FSM	ENSMUSG00000036270.17	ENSMUST00000119261.8	4645	29	-41	7	29	-7	multi-exon	FALSE	canonical	3	70	junction_18	83.7903344847198	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3285	False	NA	7	True	ATTAAA	-14	NA	106607541	106619833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_182209_13	chr8	+	5035	28	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	10	-7	intron_retention	FALSE	canonical	3	268	junction_15	54.3500567562735	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3266	False	NA	7	True	ATTAAA	-14	NA	106607522	106619833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_182212_11	chr8	+	5397	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	30	0	intron_retention	FALSE	canonical	3	268	junction_14	55.3667706295105	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3286	False	NA	14	True	AATAAA	-6	NA	106607542	106619840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_182223_239	chr8	+	3283	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	-3	-25	-3	25	multi-exon	FALSE	canonical	3	44	junction_1	10	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGACTGTGCCATGGG	NA	False	NA	12	True	AATAAA	-42	NA	106627069	106658435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106627173_106639251_106640279_106656282
Isoform_182231_343	chr8	+	1867	16	FSM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	0	-7	0	7	multi-exon	FALSE	canonical	3	148	junction_9	22.4047613987146	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTCAACCTTACATCC	NA	False	NA	19	True	AATAAA	-19	NA	106738138	106780458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
Isoform_182232_37	chr8	+	1847	15	FSM	ENSMUSG00000031901.13	ENSMUST00000119736.8	1837	15	-29	19	-29	2	multi-exon	TRUE	canonical	3	13	junction_4	52.5452186216786	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCTGCTTCAACCTTA	NA	False	NA	14	True	AATAAA	-14	NA	106738109	106780453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
Isoform_182233_32	chr8	+	6108	11	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	78.5147119971792	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	106786244	106857169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
Isoform_182234_15	chr8	+	6139	11	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-52	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	78.5147119971792	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGAAATCTGAGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106786212	106857168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
Isoform_182239_303	chr8	+	6004	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-20	0	-20	0	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	106786244	106857169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
Isoform_18224_3537	chr11	-	1895	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	1	3	1	0	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	3537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTCCTGGTCTTTTG	6004	False	NA	-8	True	ATTAAA	-28	NA	116743919	116740729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_116741788_116742846_116743158_116743393
Isoform_182241_12	chr8	+	5375	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-75	684	-75	-684	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATGCCTTTTAAATAC	NA	False	NA	NA	False	AATAAA	-34	NA	106786189	106856485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
Isoform_182251_4	chr8	+	1180	2	FSM	ENSMUSG00000086390.8	ENSMUST00000145343.2	984	2	0	-196	0	196	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTGGTATTTTGCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	106863696	106865353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106863983_106864459
Isoform_182252_398	chr8	+	2730	6	FSM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	-26	2	-26	1	multi-exon	FALSE	canonical	3	107	junction_2	8.49941174435031	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGCCTTGTCCTGCTCT	6171	False	NA	12	True	AATAAA	-18	NA	106877004	106891345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887715_106887941_106889456
Isoform_182254_15	chr8	+	2568	6	FSM	ENSMUSG00000031903.8	ENSMUST00000212963.2	2578	6	12	-2	12	-1	multi-exon	FALSE	canonical	1	1	junction_4	47.4088599314516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCCTTGTCCTGCTCTG	6209	False	NA	13	True	AATAAA	-19	NA	106877042	106891346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887840_106887941_106889456
Isoform_182257_4	chr8	+	2321	2	ISM	ENSMUSG00000031904.6	ENSMUST00000213020.2	3200	9	11	16154	0	1693	5prime_fragment	FALSE	canonical	3	200	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAACA	1861	False	NA	NA	False	NA	NA	NA	106895517	106907985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_106895587_106905733
Isoform_182258_121	chr8	+	3047	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	19	684	1	177	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCTGGAATGTTCTAC	1851	False	NA	12	True	AATAAA	-27	NA	106895507	106924654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
Isoform_182259_9	chr8	+	5504	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	22	-1776	4	1776	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTTCCTTGGTACC	1854	False	NA	NA	False	ATTAAA	-16	NA	106895510	106927114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
Isoform_182260_33	chr8	+	3731	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	18	1	0	-1	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACAGTTGCCATTGGTTC	1850	False	NA	3	True	AATAAA	-17	NA	106895506	106925337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
Isoform_182265_7	chr8	+	3175	10	NIC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	35	168	intron_retention	FALSE	canonical	3	12	junction_1	155.192671966491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGCAAGAGGCCTGGA	1896	False	NA	3	True	AATAAA	-18	NA	106895552	106924645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106895769_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
Isoform_182271_5393	chr8	+	2283	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	87	1102	0	-1102	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	5393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTTGTGGCTCAATGG	1906	False	NA	24	True	AATAAA	-25	NA	106937654	106978324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
Isoform_182272_83	chr8	+	2338	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	33	1101	33	-1101	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTGTGGCTCAATGGG	1852	False	NA	25	True	AATAAA	-26	NA	106937600	106978325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
Isoform_182273_76	chr8	+	3372	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	87	13	0	-13	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAAAAGTTTCTTCTT	1906	False	NA	NA	False	TATAAA	-45	NA	106937654	106979413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
Isoform_182306_18	chr8	+	2471	4	FSM	ENSMUSG00000031907.10	ENSMUST00000034382.8	2632	4	1	160	1	0	multi-exon	FALSE	canonical	2	13	junction_1	5.09901951359278	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGGCTTCTTGTAGAAC	NA	False	NA	NA	False	ATTAAA	-20	NA	107141971	107152361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107142403_107145702_107145830_107146146_107146243_107150544
Isoform_182308_4	chr8	+	3690	4	FSM	ENSMUSG00000031907.10	ENSMUST00000034382.8	2632	4	-6	-1052	6	343	multi-exon	FALSE	canonical	2	13	junction_1	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGATGTGTTTCCCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	107141964	107153573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107142403_107145702_107145830_107146146_107146243_107150544
Isoform_182309_176	chr8	+	3231	16	FSM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	-23	1176	-23	-1176	multi-exon	FALSE	canonical	3	35	junction_1	6.02218122167265	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGGTGCTAGGGGAGT	NA	False	NA	3	True	ATTAAA	-17	NA	107237499	107282753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107237639_107237855_107237974_107262039_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
Isoform_182313_24	chr8	+	3228	16	NNC	ENSMUSG00000061048.9	novel	4384	16	NA	NA	-23	-1176	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	12.1039938312388	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGGTGCTAGGGGAGT	NA	False	NA	3	True	ATTAAA	-17	NA	107237499	107282753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_107237639_107237855_107237974_107262042_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
Isoform_182315_4	chr8	+	2265	8	ISM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	30323	1172	30323	-1172	3prime_fragment	FALSE	canonical	3	46	junction_1	3.65334624358412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGCTAGGGGAGTGGAT	NA	False	NA	7	True	ATTAAA	-21	NA	107267845	107282757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
Isoform_182319_3107	chr8	+	4412	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	17	1	-11	-1	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	3107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5066	False	NA	25	True	ATTAAA	-17	NA	107329999	107396877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
Isoform_182327_103	chr8	+	4409	15	ISM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	765	0	-27	0	3prime_fragment	FALSE	canonical	3	808	junction_7	90.1298383172967	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5814	False	NA	26	True	ATTAAA	-18	NA	107330747	107396878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
Isoform_182366_405	chr8	+	3835	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	-1	575	-1	-575	multi-exon	FALSE	canonical	3	69	junction_2	14.9330686662985	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTCACCGAGCTGGTT	1112	False	NA	40	True	AATAAA	-41	NA	107409698	107577496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
Isoform_182367_7	chr8	+	5491	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	18	-1100	18	1100	multi-exon	FALSE	canonical	3	69	junction_2	14.9330686662985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	1131	False	NA	NA	False	NA	NA	NA	107409717	107579171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
Isoform_182368_7	chr8	+	3952	19	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	2	-575	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	33.9796598563114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTCACCGAGCTGGTT	1115	False	NA	40	True	AATAAA	-41	NA	107409701	107577496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107570297_107570418_107576810
Isoform_182375_2837	chr8	+	2233	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	5	-6	5	6	multi-exon	TRUE	canonical	3	1046	junction_1	100.936996902771	2837	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTAAATTATTTTCT	NA	False	NA	18	True	AATAAA	-23	NA	107620287	107649726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
Isoform_182393_6	chr8	+	1198	2	FSM	ENSMUSG00000041308.7	ENSMUST00000212298.2	792	2	-406	0	-7	0	multi-exon	FALSE	canonical	3	143	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107662374	107708376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107662954_107707757
Isoform_182397_124	chr8	+	4420	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	4	5521	3	1013	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATTAAAATAAA	NA	False	NA	NA	False	AATAAA	-45	NA	107662385	107740825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
Isoform_182398_32	chr8	+	4450	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	-26	5521	-26	1013	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATTAAAATAAA	NA	False	NA	NA	False	AATAAA	-45	NA	107662355	107740825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
Isoform_1824_5	chr10	-	4933	16	FSM	ENSMUSG00000039697.17	ENSMUST00000068567.5	5105	16	167	5	167	1	multi-exon	FALSE	canonical	1	1	junction_15	2.09337579574768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATTTCTTTCCTAAA	NA	False	NA	-5	True	AATAAA	-17	NA	30678936	30521584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30523648_30523962_30524037_30524440_30524537_30528931_30529085_30530306_30530439_30538289_30538438_30565699_30565869_30566752_30567784_30570064_30570250_30572063_30572190_30574125_30574240_30577914_30578023_30580596_30580677_30598641_30598863_30647715_30647837_30678824
Isoform_18240_441	chr11	-	2954	2	NIC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	1	0	intron_retention	FALSE	canonical	3	1775	junction_1	0	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTCCTGGTCTTTTG	6004	False	NA	-8	True	ATTAAA	-28	NA	116743919	116740729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116743158_116743393
Isoform_182401_17	chr8	+	2020	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	-49	7974	-49	-1440	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTCTTCTTTTCTTTGT	NA	False	NA	7	True	CATAAA	-14	NA	107662332	107738372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
Isoform_182411_358	chr8	+	2081	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	98	-1	98	1	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGAGTCGTCTCATT	NA	False	NA	18	True	AATAAA	-18	NA	107757951	107772388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
Isoform_182413_18	chr8	+	2141	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	38	-1	38	1	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGAGTCGTCTCATT	NA	False	NA	18	True	AATAAA	-18	NA	107757891	107772388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
Isoform_182416_25	chr8	+	3010	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	21	5	-3	-5	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGTCTCCGTATCA	NA	False	NA	14	True	ATTAAA	-15	NA	107783529	107787558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
Isoform_182417_713	chr8	+	1127	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	21	1888	-3	377	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGAGTGTTTTGTT	NA	False	NA	34	True	AATAAA	-28	NA	107783529	107785675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
Isoform_182423_20	chr8	+	1219	4	NIC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	-1	378	intron_retention	FALSE	canonical	3	714	junction_3	58.9594964549581	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGAGTGTTTTGTTG	NA	False	NA	35	True	AATAAA	-29	NA	107783531	107785676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_107783623_107783724_107784044_107784678_107784820_107785008
Isoform_182426_993	chr8	+	4271	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	45	0	45	0	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGGTTGCTTTTTTTTTT	NA	False	NA	17	True	AATAAA	-28	NA	107877316	107914103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
Isoform_182430_1208	chr8	+	903	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	43	3370	43	-1889	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTTGTCATTCATCA	NA	False	NA	38	True	AGTAAA	-20	NA	107877314	107910733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
Isoform_182450_1676	chr8	+	2891	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	41	1382	6	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	11	True	AATAAA	-22	NA	108163037	108283845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
Isoform_182451_239	chr8	+	4304	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	10	0	-9	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTGTCAGTGTAGCT	NA	False	NA	11	True	AATAAA	-14	NA	108163006	108285227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
Isoform_182460_32	chr8	+	2784	23	FSM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	-25	-1	-9	0	multi-exon	FALSE	canonical	3	12	junction_4	144.720334461373	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	11	True	AATAAA	-22	NA	108163006	108283845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
Isoform_182477_8	chr8	+	1839	4	FSM	ENSMUSG00000031723.9	ENSMUST00000034159.8	1890	4	42	9	42	-9	multi-exon	FALSE	canonical	3	27	junction_1	19.3045763140937	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTCAGCAGGGTTGT	NA	False	NA	6	True	AATAAA	-45	NA	110292565	110300674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110292696_110295521_110295730_110298002_110298155_110299325
Isoform_182479_12	chr8	+	2162	9	FSM	ENSMUSG00000031728.11	ENSMUST00000034163.9	2127	9	-35	0	-32	0	multi-exon	FALSE	canonical	2	14	junction_5	6.08147802758507	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432145	110451564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_182480_29	chr8	+	2053	9	FSM	ENSMUSG00000031728.11	ENSMUST00000034163.9	2127	9	74	0	3	0	multi-exon	FALSE	canonical	2	14	junction_5	6.08147802758507	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432254	110451564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_182481_36	chr8	+	2093	9	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	4.9180788932265	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432233	110451564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_182482_10	chr8	+	2181	9	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-31	1	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	4.9180788932265	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCCCTTGTCTCATT	NA	False	NA	9	True	AATAAA	-22	NA	110432146	110451565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_182483_5	chr8	+	2013	8	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	6.75821495572278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432178	110451564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_182484_11	chr8	+	1938	8	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	6.75821495572278	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432253	110451564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_182485_8	chr8	+	2050	8	FSM	ENSMUSG00000031728.11	ENSMUST00000212964.2	2033	8	-17	0	-17	0	multi-exon	FALSE	canonical	2	17	junction_2	5.70356136505061	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432160	110451564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_182486_23	chr8	+	1957	8	FSM	ENSMUSG00000031728.11	ENSMUST00000212964.2	2033	8	77	-1	3	1	multi-exon	FALSE	canonical	2	17	junction_2	5.70356136505061	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCCCTTGTCTCATT	NA	False	NA	9	True	AATAAA	-22	NA	110432254	110451565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_182493_79	chr8	+	4018	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-332	6	20	-6	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATCGTTCCCACATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110505205	110587984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
Isoform_1825_4	chr10	-	434	2	ISM	ENSMUSG00000039697.17	ENSMUST00000215725.2	1445	7	185	75829	-34	-75829	5prime_fragment	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATTTATTTTCCAAT	NA	False	NA	NA	False	NA	NA	NA	30679137	30647715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_30647837_30678824
Isoform_182501_56	chr8	+	6874	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-332	-2850	20	4	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGCTGCCTTGCTTCT	NA	False	NA	20	True	AATAAA	-22	NA	110505205	110590840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
Isoform_182502_67	chr8	+	6552	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-14	-2846	-5	0	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAACTTTGCTGCCTTGC	NA	False	NA	16	True	AATAAA	-18	NA	110505523	110590836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
Isoform_182513_7	chr8	+	4932	5	FSM	ENSMUSG00000044676.11	ENSMUST00000058804.10	3180	5	-22	-1730	-4	-1	multi-exon	FALSE	canonical	1	4	junction_2	8.66025403784439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCTGAGACTTGCTT	931	False	NA	NA	False	AATAAA	-15	NA	110806373	110819372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110806637_110809309_110809375_110810238_110810416_110810975_110811084_110815053
Isoform_182516_24	chr8	+	4893	5	FSM	ENSMUSG00000044676.11	ENSMUST00000212754.2	4863	5	-31	1	-15	-1	multi-exon	FALSE	canonical	3	11	junction_2	6.21992765231236	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCTGAGACTTGCTT	920	False	NA	NA	False	AATAAA	-15	NA	110806362	110819372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110806637_110809309_110809375_110810288_110810416_110810975_110811084_110815053
Isoform_182517_19	chr8	+	1464	10	FSM	ENSMUSG00000095941.4	ENSMUST00000213641.2	1649	10	236	-51	236	51	multi-exon	FALSE	canonical	3	15	junction_3	3.97523195999963	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCGATTGTGTGTTTC	NA	False	NA	9	True	AATAAA	-16	NA	110828074	110838644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110828167_110835615_110835726_110835834_110835858_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837295_110837438_110837593_110837930_110838005_110838289
Isoform_182519_3	chr8	+	1484	10	NNC	ENSMUSG00000095941.4	novel	1649	10	NA	NA	234	51	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	6.23807504338587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCGATTGTGTGTTTC	NA	False	NA	9	True	AATAAA	-16	NA	110828072	110838644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_110828167_110835597_110835726_110835834_110835858_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837295_110837438_110837593_110837930_110838005_110838289
Isoform_18252_595	chr11	-	2905	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	-37	-3	-18	3	multi-exon	FALSE	canonical	3	224	junction_9	41.6618095045227	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671502	117656810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_182520_146	chr8	+	3363	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	-12	194	-12	-194	multi-exon	TRUE	canonical	3	60	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAAGGTGTTAATTTGT	3628	False	NA	6	True	AATAAA	-13	NA	110944608	110950924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110944719_110947671
Isoform_182521_84	chr8	+	3537	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	10	-2	10	2	multi-exon	FALSE	canonical	3	60	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTGTTTCATT	3650	False	NA	NA	False	AATAAA	-15	NA	110944630	110951120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_110944719_110947671
Isoform_182523_3	chr8	+	1958	8	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	56045	20728	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_7	2.71804251292006	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGAGTGTC	NA	False	NA	NA	False	NA	NA	NA	111227165	111234981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_111227451_111229557_111229686_111231800_111231932_111232374_111232512_111232725_111232854_111233059_111233252_111233512_111233663_111234174
Isoform_182524_5	chr8	+	2043	8	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	247113	76761	69601	45871	internal_fragment	FALSE	canonical	3	20	junction_2	3.48173074484398	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTCTTTAATATTGAC	NA	False	NA	NA	False	ATTAAA	-13	NA	111240721	111260124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307
Isoform_182525_7	chr8	+	5466	19	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	247114	50637	69602	-50637	internal_fragment	FALSE	canonical	3	19	junction_12	4.32370725702428	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGATTAAACTGCCTAGA	NA	False	NA	NA	False	TTTAAA	-5	NA	111240722	111286248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
Isoform_182526_4	chr8	+	5472	19	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	69601	-50626	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	6.37704215656966	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTAGAATTTCTTTCTT	NA	False	NA	NA	False	ATTAAA	-1	NA	111240721	111286259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_111240920_111241461_111241636_111245712_111245928_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
Isoform_182533_59	chr8	+	2330	15	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	-15	3695	3	1	5prime_fragment	FALSE	canonical	3	404	junction_10	33.1637864951196	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGGGTTAATTGCTC	7350	False	NA	NA	False	NA	NA	NA	111345219	111437316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949
Isoform_182536_26	chr8	+	2558	17	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	-16	1332	2	101	5prime_fragment	FALSE	canonical	3	368	junction_15	41.455548482682	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTAGTTTTGTCTGTTT	7349	False	NA	NA	False	GATAAA	-35	NA	111345218	111439679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379
Isoform_182539_1744	chr8	+	3079	19	FSM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	-11	1	3	1	multi-exon	FALSE	canonical	3	368	junction_15	41.1869046070606	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGTCTGCCTGCTCCTT	7350	False	NA	15	True	AATAAA	-19	NA	111345219	111447029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
Isoform_18254_13	chr11	-	2964	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	-96	-3	-77	3	multi-exon	FALSE	canonical	3	224	junction_9	41.6618095045227	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671561	117656810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_182542_44	chr8	+	2907	18	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_17	108.822098559751	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGTCTGCCTGCTCCTT	7371	False	NA	15	True	AATAAA	-19	NA	111345240	111447029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111446438
Isoform_18255_10	chr11	-	2822	20	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-23	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	75.9397267921288	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671793	117656810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671735
Isoform_182552_19	chr8	+	4841	14	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	23.3298954920214	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCCCGGCTTCCTCCTGG	NA	False	NA	6	True	AATAAA	-16	NA	111448078	111468031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458593_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
Isoform_182557_93	chr8	+	4752	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	-36	1	-36	-1	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCCCGGCTTCCTCCTGG	NA	False	NA	6	True	AATAAA	-16	NA	111448071	111468031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
Isoform_182560_3	chr8	+	3470	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	-213	1460	-213	5	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTATGTGGGGCAAG	NA	False	NA	18	True	AATAAA	-19	NA	111447894	111466572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
Isoform_182561_3	chr8	+	4937	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	-223	3	-223	-3	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGCCCCGGCTTCCTCCT	NA	False	NA	4	True	AATAAA	-14	NA	111447884	111468029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
Isoform_182567_1735	chr8	+	2729	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	4	4	-1	2	multi-exon	TRUE	canonical	3	332	junction_8	32.668367302671	1735	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGCCATTGTGTTGGGT	9632	False	NA	9	True	AATAAA	-14	NA	111573669	111608855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
Isoform_182582_198	chr8	+	3749	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	38	609	2	-609	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	3075	False	NA	NA	False	ATTAAA	-15	NA	111646591	111698503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_182583_93	chr8	+	3468	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-29	957	-29	-957	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTCCTTCCCAGTTTC	3008	False	NA	22	True	AATACA	-18	NA	111646524	111698155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_182584_45	chr8	+	3845	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-58	609	-58	-609	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	2979	False	NA	NA	False	ATTAAA	-15	NA	111646495	111698503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_182585_12	chr8	+	3928	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-143	611	-143	-611	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGAGTCACTCATCTGTT	2894	False	NA	NA	False	ATTAAA	-13	NA	111646410	111698501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_182588_22	chr8	+	4369	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	23	4	-13	-4	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAC	3060	False	NA	NA	False	ACTAAA	-26	NA	111646576	111699108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_182591_5	chr8	+	4479	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-68	-15	-68	15	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCCACAGGTAGTAAG	2969	False	NA	NA	False	ATTAAA	-13	NA	111646485	111699127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_182595_6	chr8	+	2382	5	ISM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	42175	609	21193	-609	3prime_fragment	FALSE	canonical	3	87	junction_1	5.93190525885234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	68	False	NA	NA	False	ATTAAA	-15	NA	111688728	111698503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_182597_4125	chr8	+	3323	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2095	combination_of_known_junctions	FALSE	canonical	2	881	junction_1	574.494062197339	4125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760510	111782201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
Isoform_1826_4	chr10	-	2579	5	FSM	ENSMUSG00000019789.10	ENSMUST00000019924.9	2550	5	-30	1	-30	-1	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTGGAGGAGTTGC	NA	False	NA	NA	False	ATTAAA	-18	NA	30718827	30708355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_30710424_30713470_30713553_30716386_30716471_30716599_30716679_30718561
Isoform_18260_161	chr11	-	2899	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-24	3	at_least_one_novel_splicesite	TRUE	canonical	3	72	junction_9	62.8793418727409	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671508	117656810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_182605_606	chr8	+	3323	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-1	-2095	combination_of_known_junctions	FALSE	canonical	2	137	junction_1	723.09724622626	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760546	111782201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_111760577_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
Isoform_182608_7719	chr8	+	3642	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	13	2095	-1	-2095	multi-exon	FALSE	canonical	2	1913	junction_1	386.82599124154	7719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760546	111782201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
Isoform_18262_21	chr11	-	2918	20	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-15	3	combination_of_known_junctions	TRUE	canonical	3	55	junction_7	66.6673222497775	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671499	117656810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_18264_15	chr11	-	2808	19	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-17	3	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	76.5374918214661	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671501	117656810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_182653_7	chr8	+	7647	18	FSM	ENSMUSG00000033624.11	ENSMUST00000039333.10	4938	18	-13	-2696	-2	2696	multi-exon	TRUE	canonical	3	24	junction_1	8.20878085010087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTAATATTCACTTGT	NA	False	NA	7	True	AATAAA	-16	NA	111821259	111866402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111821459_111828445_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
Isoform_182655_15	chr8	+	7508	18	NIC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	72	2703	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	9.5822789149634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCACTTGTGAAATGT	NA	False	NA	14	True	AATAAA	-23	NA	111821358	111866409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_111821459_111828492_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
Isoform_182656_6	chr8	+	7602	18	NIC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	5	2705	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	9.5822789149634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTTGTGAAATGTCC	NA	False	NA	16	True	AATAAA	-25	NA	111821266	111866411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_111821459_111828492_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
Isoform_182659_10	chr8	+	3424	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-322	6	-120	-6	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGATGCACCGTGTGA	NA	False	NA	NA	False	ATTAAA	-11	NA	112263151	112350404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
Isoform_18266_38	chr11	-	2110	5	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	230	0	5	0	intron_retention	FALSE	canonical	3	985	junction_3	61.9732805328232	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716688	117706351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496
Isoform_182660_135	chr8	+	2731	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-333	710	-131	95	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTTGTGTCGACTG	NA	False	NA	8	True	AAAAAG	-28	NA	112263140	112349700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
Isoform_182663_118	chr8	+	1944	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-611	-95	-131	95	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTTGTGTCGACTG	NA	False	NA	8	True	AAAAAG	-28	NA	112263140	112349700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
Isoform_182665_9	chr8	+	2661	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-621	-802	-141	-3	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCACCGTGTGATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	112263130	112350407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
Isoform_182667_33	chr8	+	1638	5	FSM	ENSMUSG00000033545.15	ENSMUST00000168428.8	4451	5	-132	2945	-132	112	multi-exon	FALSE	canonical	3	40	junction_4	33.169074451965	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTTTTCCCTTGTGAT	NA	False	NA	25	True	TATAAA	-16	NA	112263139	112349717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349430
Isoform_182668_5	chr8	+	2322	5	FSM	ENSMUSG00000033545.15	ENSMUST00000168428.8	4451	5	-126	2255	-126	-3	multi-exon	FALSE	canonical	3	40	junction_4	33.169074451965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCACCGTGTGATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	112263145	112350407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349430
Isoform_182669_5	chr8	+	2618	3	FSM	ENSMUSG00000033545.15	ENSMUST00000173726.8	549	3	-922	-1147	-99	110	multi-exon	FALSE	canonical	1	3	junction_1	51.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGTTTTCCCTTGTG	NA	False	NA	23	True	TATAAA	-14	NA	112263172	112349715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112264197_112345837_112345944_112348227
Isoform_182670_4	chr8	+	4237	2	ISM	ENSMUSG00000055835.11	ENSMUST00000212206.2	1636	5	-38	8252	-38	-8231	5prime_fragment	FALSE	canonical	3	86	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	112370073	112389083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_112370245_112385017
Isoform_182671_3	chr8	+	1888	4	FSM	ENSMUSG00000055835.11	ENSMUST00000212072.2	1930	4	41	1	-38	-1	multi-exon	FALSE	canonical	1	5	junction_2	33.7671766990109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGAGTGTTTTTGGCT	NA	False	NA	9	True	AATAGA	-16	NA	112370073	112397639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112370245_112385017_112385074_112392692_112392837_112396122
Isoform_182672_32	chr8	+	1873	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	-63	1	-37	-1	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTGTTTTTGGCTTTT	NA	False	NA	12	True	AATAGA	-19	NA	112370074	112397642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
Isoform_182678_4	chr8	+	1468	4	FSM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	-58	-1	-1	1	multi-exon	FALSE	canonical	3	27	junction_2	24.1430919496424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112370110	112397315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112370245_112385017_112385074_112392751_112392837_112396122
Isoform_182679_4	chr8	+	1797	4	FSM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	-62	-326	-5	0	multi-exon	FALSE	canonical	3	27	junction_2	24.1430919496424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGAGTGTTTTTGGCTT	NA	False	NA	10	True	AATAGA	-17	NA	112370106	112397640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112370245_112385017_112385074_112392751_112392837_112396122
Isoform_182680_1034	chr8	+	959	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	20	698	20	172	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGGTGTGACCATGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	112667354	112679546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
Isoform_182683_38	chr8	+	998	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	-18	697	-18	173	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	112667316	112679547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
Isoform_182684_72	chr8	+	1268	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	21	388	21	-388	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATTTATTGGTGTT	NA	False	NA	2	True	AATATA	-7	NA	112667355	112679856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
Isoform_182686_31	chr8	+	1659	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	19	-1	19	1	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAACATGTACTT	NA	False	NA	NA	False	NA	NA	NA	112667353	112680245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
Isoform_182687_16	chr8	+	3427	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	19	-1769	19	1769	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCTGTGTTGACTTCA	NA	False	NA	9	True	ATTAAA	-17	NA	112667353	112682013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
Isoform_182689_404	chr8	+	2222	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	10	1328	6	-1328	multi-exon	FALSE	canonical	3	135	junction_1	1.5	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCATTTTCTTTGATTT	NA	False	NA	NA	False	AATAAA	-26	NA	112738039	112745832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112738775_112741968_112742094_112744470
Isoform_18269_1097	chr11	-	1190	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	245	5	0	-5	multi-exon	FALSE	canonical	3	796	junction_5	107.729084074615	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGAACGTGTTTCTCCT	NA	False	NA	-22	True	ATTAAA	-11	NA	117716673	117706356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
Isoform_182694_22	chr8	+	3543	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	13	4	9	-4	multi-exon	FALSE	canonical	3	135	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTACTGTCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	112738042	112747156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_112738775_112741968_112742094_112744470
Isoform_182696_47	chr8	+	4842	6	FSM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	1	-1373	1	0	multi-exon	FALSE	canonical	3	24	junction_1	7.91454357496375	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCAGCCTCTTTTCTT	NA	False	NA	20	True	AATAAA	-21	NA	114362219	114371811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_114362341_114362743_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
Isoform_1827_5	chr10	-	917	8	FSM	ENSMUSG00000000296.9	ENSMUST00000213528.2	969	8	-9	61	-9	-31	multi-exon	FALSE	canonical	3	22	junction_3	226.139563192327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTACTCTGGAGTATTTA	NA	False	NA	-6	True	AATAAA	-30	NA	31321860	31208683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31219007_31219023_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_18270_139	chr11	-	1178	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	3	149	junction_5	366.911215418662	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGGGTTTCCCTAACT	NA	False	NA	-2	True	ATTAAA	-31	NA	117716673	117706336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716539
Isoform_182700_29	chr8	+	5012	5	FSM	ENSMUSG00000078908.11	ENSMUST00000035777.10	4998	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	34	junction_3	4.52769256906871	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCAGCCTCTTTTCTT	NA	False	NA	20	True	AATAAA	-21	NA	114362452	114371811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
Isoform_182704_6	chr8	+	1044	4	FSM	ENSMUSG00000031767.14	ENSMUST00000073521.12	3543	4	61	2438	0	-1	multi-exon	FALSE	canonical	2	2	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATGGCTTGCAATATT	NA	False	NA	NA	False	NA	NA	NA	114860357	114879041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_114860441_114863077_114863232_114874634_114874794_114878393
Isoform_182705_8	chr8	+	649	4	ISM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	1	5309	1	-5309	5prime_fragment	FALSE	canonical	3	123	junction_1	3.39934634239519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTGTTACAGTGTGAG	NA	False	NA	NA	False	ATTAAA	-18	NA	115166442	115175249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899
Isoform_182709_3	chr8	+	2417	5	FSM	ENSMUSG00000004637.16	ENSMUST00000109107.3	2383	5	-31	-3	16	3	multi-exon	FALSE	canonical	0	0	junction_4	54.7830950202706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGGATACCTGCTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	115166410	115201272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115199365
Isoform_182712_8	chr8	+	1768	9	FSM	ENSMUSG00000004637.16	ENSMUST00000109108.9	1771	9	8	-5	1	5	multi-exon	FALSE	canonical	0	0	junction_8	40.6294228361664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAGTGGGTGACTGGT	NA	False	NA	NA	False	AATAAA	-24	NA	115166442	115601983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115601340
Isoform_182715_337	chr8	+	1787	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-18	-1	-8	1	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117648460	117668243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
Isoform_182716_5	chr8	+	2309	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-18	-523	-8	519	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTTTTGGTCACGGT	NA	False	NA	NA	False	NA	NA	NA	117648460	117668765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
Isoform_182719_13	chr8	+	2697	11	NIC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	-8	1	intron_retention	FALSE	canonical	3	221	junction_1	43.3192797724062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117648460	117668243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117664014_117667182_117667310_117667573
Isoform_18272_45	chr11	-	1121	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	16	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	399.354178643469	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGTTTCCCTAACTT	NA	False	NA	-1	True	ATTAAA	-32	NA	117716673	117706335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_117706966_117707272_117707393_117712922_117713017_117715496_117715608_117716426_117716459_117716539
Isoform_182726_566	chr8	+	4877	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGTGAATCTTGT	NA	False	NA	24	True	ATTAAA	-18	NA	117670131	117687184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
Isoform_182728_14	chr8	+	4770	5	NNC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.827791101795	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGTGAATCTTGT	NA	False	NA	24	True	ATTAAA	-18	NA	117670154	117687184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_117670162_117670245_117670490_117679612_117679739_117681452_117681653_117682991
Isoform_182738_49	chr8	+	3457	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	-153	-652	-153	652	multi-exon	TRUE	canonical	3	16	junction_7	6.18465843842649	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTTCCTAAAAGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	117884720	117932577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
Isoform_182746_3	chr8	+	2828	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	-437	17	-437	-10	multi-exon	TRUE	canonical	3	28	junction_12	7.20052081449669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117983365	118186152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
Isoform_182747_13	chr8	+	4845	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	-366	-2071	-366	2071	multi-exon	FALSE	canonical	3	28	junction_12	7.20052081449669	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTTGGCCTTGCTGTG	NA	False	NA	2	True	AATAAA	-15	NA	117983436	118188240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
Isoform_182750_3	chr8	+	2883	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	-432	-43	-432	43	multi-exon	FALSE	canonical	3	28	junction_12	7.20052081449669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGACTCTTGACTAATAGC	NA	False	NA	NA	False	NA	NA	NA	117983370	118186212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
Isoform_182752_229	chr8	+	4306	33	FSM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	-9	1	-9	-1	multi-exon	FALSE	canonical	3	77	junction_7	32.3080872228611	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTCTGTACCTGATCTG	NA	False	NA	10	True	AATAAA	-22	NA	118225020	118361880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_182753_5	chr8	+	4253	32	NIC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	-31	-4	combination_of_known_splicesites	TRUE	canonical	1	2	junction_20	38.7412774245098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	NA	False	NA	7	True	AATAAA	-19	NA	118224998	118361877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_182755_8	chr8	+	3445	23	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	81281	5	81281	-5	3prime_fragment	FALSE	canonical	3	97	junction_3	29.2337756091073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGCGTTCTGTACCTGA	NA	False	NA	6	True	AATAAA	-18	NA	118306310	118361876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_182759_6	chr8	+	2469	16	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	91735	4	91735	-4	3prime_fragment	FALSE	canonical	3	108	junction_1	27.7483933468829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	7351	False	NA	7	True	AATAAA	-19	NA	118316764	118361877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_18276_6650	chr11	-	2538	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	4	10	4	-10	multi-exon	FALSE	canonical	3	1319	junction_1	0	6650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGACTTGAG	NA	False	NA	NA	False	AATAAA	-20	NA	117860008	117856914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_117859145_117859700
Isoform_182761_14	chr8	+	1899	12	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	102741	3	102741	-3	3prime_fragment	FALSE	canonical	3	117	junction_1	25.4749917882532	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCGTTCTGTACCTGATC	NA	False	NA	8	True	AATAAA	-20	NA	118327770	118361878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_182765_3	chr8	+	1274	5	FSM	ENSMUSG00000031844.9	ENSMUST00000034304.9	1320	5	46	0	46	0	multi-exon	FALSE	canonical	1	1	junction_3	2.69258240356725	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTTATTTTGAAATGT	NA	False	NA	NA	False	ATTAAA	-16	NA	118428688	118485766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_118429003_118461232_118461446_118469070_118469257_118479924_118480063_118485343
Isoform_182767_443	chr8	+	523	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	20	665	-8	-86	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTGTCAAACGTTTTA	NA	False	NA	23	True	ATTAAA	-26	NA	120071246	120074996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
Isoform_182768_350	chr8	+	1195	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	19	-6	-9	6	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGGTGTGGTCCTTCCC	NA	False	NA	NA	False	AATAAA	-24	NA	120071245	120075667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
Isoform_182769_20	chr8	+	1228	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	-15	-5	-15	5	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATGGTGTGGTCCTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	120071211	120075666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
Isoform_18277_172	chr11	-	2593	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	-50	9	-50	-9	multi-exon	FALSE	canonical	3	1319	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGACTTGAGC	NA	False	NA	NA	False	AATAAA	-21	NA	117860062	117856913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_117859145_117859700
Isoform_182777_243	chr8	+	2112	5	FSM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	2	14	2	1	multi-exon	TRUE	canonical	0	0	junction_4	28.3317401512862	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTAAGTCTACTTCAC	1471	False	NA	5	True	ATTAAA	-18	NA	120121618	120137827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120122210_120128219_120128333_120129172_120129330_120134294_120134445_120136726
Isoform_182778_4	chr8	+	1976	6	FSM	ENSMUSG00000074063.11	ENSMUST00000152420.8	2005	6	29	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTGAGGAGTCTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	120163885	120172995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120164033_120168133_120168242_120169171_120169309_120169654_120169847_120169930_120170023_120171695
Isoform_182779_31	chr8	+	1625	13	FSM	ENSMUSG00000031837.15	ENSMUST00000098363.10	1976	13	351	0	351	0	multi-exon	FALSE	canonical	3	44	junction_3	4.71625439894367	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTCTCTGTCCCTTT	NA	False	NA	11	True	AATAAA	-19	NA	120173808	120199379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120174004_120176820_120176846_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
Isoform_18278_104	chr11	-	2783	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	-240	9	25	-9	multi-exon	FALSE	canonical	3	1319	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGACTTGAGC	NA	False	NA	NA	False	AATAAA	-21	NA	117860252	117856913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_117859145_117859700
Isoform_182783_4	chr8	+	4835	12	NIC	ENSMUSG00000031837.15	novel	1976	13	NA	NA	-48	-6	intron_retention	FALSE	canonical	3	44	junction_2	4.70975776254132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTGTCGTGTCTCTGT	NA	False	NA	5	True	AATAAA	-13	NA	120173409	120199373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_120176846_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
Isoform_182785_12	chr8	+	1948	10	FSM	ENSMUSG00000024266.9	ENSMUST00000098361.4	1926	10	-21	-1	-21	1	multi-exon	FALSE	canonical	3	9	junction_8	9.71571210608852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGCGTGTTGGGAT	4260	False	NA	8	True	AATAAA	-13	NA	120339464	120343664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343147_120343269_120343352
Isoform_182786_22	chr8	+	2003	10	NNC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-38	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	9.71571210608852	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4243	False	NA	9	True	AATAAA	-14	NA	120339447	120343665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343110_120343269_120343352
Isoform_182787_47	chr8	+	2160	9	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	0	2	intron_retention	FALSE	canonical	3	28	junction_5	5.50993421013355	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4281	False	NA	9	True	AATAAA	-14	NA	120339485	120343665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120343269_120343352
Isoform_182788_11	chr8	+	2165	9	NNC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-21	2	intron_retention	FALSE	canonical	0	0	junction_5	12.8834923448574	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4260	False	NA	9	True	AATAAA	-14	NA	120339464	120343665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342094_120342247_120342349_120342580_120342671_120343269_120343352
Isoform_182789_4	chr8	+	2241	8	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-4	2	intron_retention	FALSE	canonical	3	29	junction_4	5.13888735674427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4277	False	NA	9	True	AATAAA	-14	NA	120339481	120343665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342247_120342349_120342580_120342671_120343269_120343352
Isoform_182792_5	chr8	+	2392	3	FSM	ENSMUSG00000031828.10	ENSMUST00000212636.2	1354	3	-20	-1018	-20	1018	multi-exon	FALSE	canonical	3	18	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCATGGGCCCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	120588984	120598473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120589187_120591741_120591819_120596360
Isoform_182794_65	chr8	+	2178	5	FSM	ENSMUSG00000031828.10	ENSMUST00000034287.10	2181	5	-3	6	0	-6	multi-exon	FALSE	canonical	3	4	junction_3	6.86931583201704	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTATCTTGTTTGAATA	NA	False	NA	NA	False	ATTAAA	-18	NA	120589007	120603728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120589187_120591741_120591819_120596360_120597432_120601113_120601272_120603035
Isoform_182795_7	chr8	+	1131	4	NIC	ENSMUSG00000031828.10	novel	2181	5	NA	NA	-21	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	7.03957069398096	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTATCTTGTTTGAATA	NA	False	NA	NA	False	ATTAAA	-18	NA	120588983	120603728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_120589187_120591741_120591819_120601113_120601272_120603035
Isoform_182800_2805	chr8	+	3259	14	FSM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	470	-3	-3	1	multi-exon	FALSE	canonical	3	816	junction_3	215.032734538435	2805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTTTCTTGGTGTG	8843	False	NA	37	True	AATAAA	-19	NA	120637568	120684297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
Isoform_182813_1194	chr8	+	3276	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	-4	2	-4	1	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTTTCTTGGTGTG	8823	False	NA	37	True	AATAAA	-19	NA	120637548	120684297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
Isoform_182814_1309	chr8	+	3251	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	20	3	1	0	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8847	False	NA	36	True	AATAAA	-18	NA	120637572	120684296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
Isoform_182861_3	chr8	+	2885	15	FSM	ENSMUSG00000031825.17	ENSMUST00000132583.8	4182	15	81	1216	11	1	multi-exon	FALSE	canonical	0	0	junction_7	1.49318178288335	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120719257	120778316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120719340_120737172_120737491_120740748_120740868_120742012_120742146_120742404_120742521_120745591_120745693_120750306_120750442_120752800_120752862_120755535_120755603_120756004_120756136_120757123_120757168_120757806_120757880_120760298_120760375_120766764_120766899_120777021
Isoform_182862_3	chr8	+	2262	2	ISM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	-59	23792	-59	2054	5prime_fragment	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGTTCAATATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	121262536	121282427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_121262694_121280322
Isoform_182863_17	chr8	+	4532	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	-35	113	-35	41	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGGTTTGGGGAATT	NA	False	NA	1	True	TATAAA	-16	NA	121262560	121306106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_182864_13	chr8	+	4642	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	-37	5	-37	-5	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTGTTTGTACTGCT	NA	False	NA	NA	False	AAAAAG	-10	NA	121262558	121306214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_182865_7	chr8	+	6540	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	-38	-1892	-38	-18	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATGTTAAGACGAAATT	NA	False	NA	3	True	AATAAA	-10	NA	121262557	121308111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_182866_57	chr8	+	4497	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	36	-41	36	41	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGGTTTGGGGAATT	NA	False	NA	1	True	TATAAA	-16	NA	121264203	121306106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_182868_30	chr8	+	4639	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	8	-155	8	1	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTACTGCTGCTGGT	NA	False	NA	NA	False	AAAAAG	-16	NA	121264175	121306220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_182869_41	chr8	+	6512	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	36	-2056	36	-8	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGAAATTCATCTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	121264203	121308121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_182870_4	chr8	+	6623	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	-74	-2057	-74	-7	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAAATTCATCTTTTTGT	NA	False	NA	14	True	AATAAA	-21	NA	121264093	121308122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_182871_3	chr8	+	4518	15	NIC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	30	10	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	36.3581953257713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCTGGTCAGAATGTT	NA	False	NA	NA	False	AAAAAG	-25	NA	121264197	121306229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_182875_6396	chr8	+	677	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	68	0	-18	0	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	6396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395028	121400946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
Isoform_182876_1523	chr8	+	700	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	45	0	6	0	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395005	121400946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
Isoform_182891_46	chr8	+	2844	9	FSM	ENSMUSG00000041515.11	ENSMUST00000047737.10	2847	9	0	3	0	-3	multi-exon	TRUE	canonical	3	23	junction_1	7.56637297521078	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAATGTTTGTTTCTTT	NA	False	NA	15	True	ATTAAA	-19	NA	121463096	121483430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
Isoform_182895_6	chr8	+	1226	6	ISM	ENSMUSG00000041515.11	ENSMUST00000162001.8	2270	9	6907	171	66	6	3prime_fragment	FALSE	canonical	3	35	junction_1	4.84148737476408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTTTCTGTGTG	NA	False	NA	NA	False	ATTAAA	-35	NA	121472284	121482149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
Isoform_182896_3	chr8	+	1379	6	ISM	ENSMUSG00000041515.11	ENSMUST00000162001.8	2270	9	6923	2	82	-2	3prime_fragment	FALSE	canonical	3	35	junction_1	4.84148737476408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAAAAAAAACTCTT	NA	False	NA	NA	False	NA	NA	NA	121472300	121482318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
Isoform_182897_3	chr8	+	2499	6	ISM	ENSMUSG00000041515.11	ENSMUST00000162001.8	2270	9	6915	-1110	74	-3	3prime_fragment	FALSE	canonical	3	35	junction_1	4.84148737476408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAATGTTTGTTTCTTT	NA	False	NA	15	True	ATTAAA	-19	NA	121472292	121483430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
Isoform_182900_1173	chr8	+	1711	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	107	714	-9	0	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	1173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTGATGTCTCATTG	9952	False	NA	16	True	AATAAA	-16	NA	122317206	122324785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
Isoform_182909_79	chr8	+	2089	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	23	3332	-8	-11	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_182910_56	chr8	+	2339	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	25	3080	-6	1	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677307	122752917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_182912_10	chr8	+	2413	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	-49	3080	3	1	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677233	122752917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_182916_115	chr8	+	2080	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-8	-11	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_182917_99	chr8	+	2330	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677307	122752917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_182919_8	chr8	+	2209	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	67.3046040195039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCAGTGTTGTTGCAC	NA	False	NA	10	True	AATAAA	-18	NA	122677304	122752919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
Isoform_182920_10	chr8	+	1954	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-8	-11	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	67.3046040195039	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
Isoform_182922_38	chr8	+	1972	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	-13	11	-8	-11	multi-exon	FALSE	non_canonical	0	0	junction_8	72.3410134171635	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_182923_35	chr8	+	2222	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	-11	-241	-6	1	multi-exon	FALSE	non_canonical	0	0	junction_8	72.3410134171635	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677307	122752917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_182926_56	chr8	+	1963	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	75	251	-8	-11	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_182928_46	chr8	+	2213	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	77	-1	-6	1	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677307	122752917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_182931_10	chr8	+	2121	12	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	73.218342099741	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677273	122752917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
Isoform_182935_90	chr8	+	3401	10	FSM	ENSMUSG00000049577.16	ENSMUST00000054052.15	3390	10	-14	3	-14	-3	multi-exon	FALSE	canonical	3	32	junction_1	9.32274531706801	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCGCTGGAGGCCCAGC	NA	False	NA	7	True	AATAAA	-16	NA	123008865	123063987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123009262_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
Isoform_182939_142	chr8	+	3781	19	FSM	ENSMUSG00000017478.16	ENSMUST00000017622.12	3810	19	30	-1	-4	0	multi-exon	FALSE	canonical	3	64	junction_3	72.8266375428831	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	935	False	NA	15	True	AATAAA	-16	NA	123103377	123144099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
Isoform_18294_5	chr11	-	1989	9	ISM	ENSMUSG00000033987.17	ENSMUST00000132685.9	13612	81	96152	3	54712	-3	3prime_fragment	FALSE	canonical	1	2	junction_7	3.45506874027131	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCCGTCTGATGCACT	NA	False	NA	NA	False	ATTAAA	-14	NA	117925308	117913904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_117914324_117915419_117915646_117915928_117916073_117916343_117916527_117917498_117917682_117918149_117918330_117923418_117923611_117924561_117924790_117925074
Isoform_182946_429	chr8	+	3702	18	FSM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	2	1	1	0	multi-exon	FALSE	canonical	3	173	junction_3	41.8252254144417	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	941	False	NA	14	True	AATAAA	-15	NA	123103383	123144098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
Isoform_182949_26	chr8	+	3726	18	FSM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	-21	0	13	0	multi-exon	FALSE	canonical	3	173	junction_3	41.8252254144417	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	918	False	NA	15	True	AATAAA	-16	NA	123103360	123144099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
Isoform_18296_4	chr11	-	2091	10	NIC	ENSMUSG00000033987.17	novel	13612	81	NA	NA	50839	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	3.80383172636082	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCGTCTGATGCACTC	NA	False	NA	NA	False	ATTAAA	-15	NA	117929181	117913903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_117914324_117915419_117915646_117915928_117916073_117916343_117916527_117917498_117917682_117918149_117918330_117923418_117923611_117924561_117924790_117925074_117925203_117928974
Isoform_182963_71	chr8	+	1699	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	17	1350	17	1	multi-exon	FALSE	canonical	3	114	junction_5	16.7624458787116	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCTACAGTACTTGT	8879	False	NA	12	True	AATAAA	-14	NA	123202898	123208481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
Isoform_182964_355	chr8	+	1658	15	NNC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	37.1131749531355	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTACAGTACTTGTGG	8921	False	NA	14	True	AATAAA	-16	NA	123202940	123208483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207963_123208069_123208137_123208209_123208269_123208334
Isoform_182967_12	chr8	+	1771	14	NNC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	17	1	intron_retention	FALSE	non_canonical	0	0	junction_12	38.4824558504785	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCTACAGTACTTGT	8879	False	NA	12	True	AATAAA	-14	NA	123202898	123208481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207963_123208069_123208269_123208334
Isoform_182968_5	chr8	+	1672	14	ISM	ENSMUSG00000049482.17	ENSMUST00000151855.8	3999	15	-2	2395	-2	0	intron_retention	FALSE	canonical	3	8	junction_11	37.1773297340442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACAGTACTTGTG	8926	False	NA	13	True	AATAAA	-15	NA	123202945	123208482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209
Isoform_182969_15	chr8	+	1615	15	FSM	ENSMUSG00000049482.17	ENSMUST00000151855.8	3999	15	-10	2394	-10	0	multi-exon	FALSE	canonical	3	8	junction_11	35.9174222974004	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTACAGTACTTGTGG	8918	False	NA	14	True	AATAAA	-16	NA	123202937	123208483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209_123208269_123208334
Isoform_18297_138	chr11	-	3158	13	FSM	ENSMUSG00000017132.18	ENSMUST00000017276.14	3135	13	-18	-5	14	-4	multi-exon	FALSE	canonical	3	24	junction_4	8.05665701282003	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTCTGCTCTGCTG	8614	False	NA	-1	True	AATAAA	-21	NA	118139404	118054995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
Isoform_182970_13	chr8	+	1765	14	NNC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	31	0	intron_retention	FALSE	non_canonical	0	0	junction_11	38.5070499961797	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACAGTACTTGTG	8893	False	NA	13	True	AATAAA	-15	NA	123202912	123208482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207963_123208069_123208137_123208209_123208269_123208334
Isoform_182971_13	chr8	+	1701	15	NNC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	-28	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	48.2525773870142	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCTACAGTACTTGT	8900	False	NA	12	True	AATAAA	-14	NA	123202919	123208481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123204000_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207963_123208069_123208137_123208209_123208269_123208334
Isoform_182972_7	chr8	+	1846	14	NNC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	11	1	intron_retention	FALSE	non_canonical	0	0	junction_11	38.51396426995	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCTACAGTACTTGT	8950	False	NA	12	True	AATAAA	-14	NA	123202969	123208481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207963_123208069_123208137_123208209_123208269_123208334
Isoform_182976_2221	chr8	+	2179	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	27	-17	16	17	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	2221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCTCTTTAAATGCT	2613	False	NA	44	True	AATAAA	-32	NA	123294780	123299884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
Isoform_182977_224	chr8	+	2228	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	-32	-7	-32	7	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTCACCGTAAAATCTC	2554	False	NA	34	True	AATAAA	-43	NA	123294721	123299874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
Isoform_182981_39	chr8	+	2261	9	FSM	ENSMUSG00000006585.4	ENSMUST00000212967.2	2696	9	16	419	16	7	multi-exon	FALSE	canonical	3	858	junction_2	70.7626976238187	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTCACCGTAAAATCTC	2613	False	NA	34	True	AATAAA	-43	NA	123294780	123299874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
Isoform_182995_196	chr8	+	590	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	-2	1071	-2	-1071	multi-exon	FALSE	canonical	3	528	junction_1	75.9884859699152	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTACGTTGTCCTGTGTC	5520	False	NA	24	True	ACTAAA	-16	NA	123338382	123342328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
Isoform_182996_17	chr8	+	909	4	NIC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	-16	-1071	intron_retention	FALSE	canonical	3	528	junction_1	87.3473271231327	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTACGTTGTCCTGTGTC	5500	False	NA	24	True	ACTAAA	-16	NA	123338362	123342328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_123338433_123339804_123339978_123340659_123341127_123342129
Isoform_182997_5	chr8	+	2454	9	ISM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	0	3472	0	-18	5prime_fragment	FALSE	canonical	2	11	junction_1	9.16174110090435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGCTTGCCCCAT	9534	False	NA	NA	False	NA	NA	NA	123502243	123541147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298
Isoform_182998_56	chr8	+	2204	10	FSM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	0	2	0	-2	multi-exon	FALSE	canonical	2	11	junction_1	8.97458689169274	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGACCTGTGAGCTG	9534	False	NA	11	True	AATAAA	-23	NA	123502243	123544617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
Isoform_182999_73	chr8	+	2247	10	FSM	ENSMUSG00000015016.9	ENSMUST00000212790.2	2171	10	-73	-3	0	3	multi-exon	FALSE	canonical	3	16	junction_1	7.64489662745314	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTGTGAGCTGTGAGT	9534	False	NA	16	True	AATAAA	-28	NA	123502243	123544622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123502368_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
Isoform_183001_8	chr8	+	2870	10	NNC	ENSMUSG00000000738.19	novel	2481	16	NA	NA	1	2381	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	81.0569073072877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGTTTTGTTTTTGTTT	NA	False	NA	NA	False	TATAAA	-17	NA	123792247	123809107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123808909_123808938
Isoform_183002_590	chr8	+	2569	17	FSM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	321	6	-8	1	multi-exon	FALSE	canonical	3	204	junction_8	27.3615120881504	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCTCTCCATGTGTA	NA	False	NA	14	True	AGTAAA	-14	NA	123792238	123824493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
Isoform_183003_10	chr8	+	3755	17	FSM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	320	-1179	-9	1179	multi-exon	FALSE	canonical	3	204	junction_8	27.3615120881504	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTACCTTTTGTATG	NA	False	NA	NA	False	AATAAA	-36	NA	123792237	123825678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
Isoform_183005_7	chr8	+	3503	15	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-8	1	intron_retention	FALSE	canonical	3	221	junction_3	21.8156702713383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCTCTCCATGTGTA	NA	False	NA	14	True	AGTAAA	-14	NA	123792238	123824493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
Isoform_183007_23	chr8	+	2702	18	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	79.4584176686668	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCTCTCCATGTGTA	NA	False	NA	14	True	AGTAAA	-14	NA	123792238	123824493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_123792449_123792965_123793099_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
Isoform_183017_13290	chr8	+	708	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	64	8	64	5	multi-exon	FALSE	canonical	3	17818	junction_5	2681.35350895774	13290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAAAGCTGGGTTTCTT	NA	False	NA	9	True	AATAAA	-10	NA	123829152	123831975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
Isoform_183018_3242	chr8	+	738	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	34	8	34	5	multi-exon	FALSE	canonical	3	17818	junction_5	2681.35350895774	3242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAAAGCTGGGTTTCTT	NA	False	NA	9	True	AATAAA	-10	NA	123829122	123831975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
Isoform_183035_3	chr8	+	2423	15	FSM	ENSMUSG00000034796.15	ENSMUST00000037900.9	2398	15	-24	-1	-20	1	multi-exon	FALSE	canonical	0	0	junction_1	9.77919490864276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGCCTTTCTTGCT	NA	False	NA	5	True	AATAAA	-17	NA	123844092	123861922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123844404_123846357_123846541_123850886_123850962_123851140_123851216_123852300_123852385_123852979_123853070_123853371_123853474_123854091_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
Isoform_183036_6	chr8	+	2319	9	NIC	ENSMUSG00000034796.15	novel	2398	15	NA	NA	-66	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	6.93609219950254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGCCTTTCTTGCT	NA	False	NA	5	True	AATAAA	-17	NA	123853189	123861922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_123853474_123853559_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
Isoform_183037_5	chr8	+	2295	9	NNC	ENSMUSG00000034796.15	novel	3018	14	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.53222244759141	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACAGCCTGTGCCTTTCTT	NA	False	NA	2	True	AATAAA	-14	NA	123853202	123861919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_123853474_123853559_123854179_123854479_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
Isoform_183038_4	chr8	+	1795	9	ISM	ENSMUSG00000034796.15	ENSMUST00000037900.9	2398	15	9064	0	-75	0	3prime_fragment	FALSE	canonical	1	2	junction_1	7.1894019222742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTGTGCCTTTCTTGC	NA	False	NA	4	True	AATAAA	-16	NA	123853180	123861921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_123853474_123854091_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
Isoform_183039_15	chr8	+	2426	8	ISM	ENSMUSG00000034796.15	ENSMUST00000134235.8	3018	14	9056	-3	-87	1	3prime_fragment	FALSE	canonical	3	10	junction_1	4.85293935756087	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGCCTTTCTTGCT	NA	False	NA	5	True	AATAAA	-17	NA	123853168	123861922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
Isoform_18304_35	chr11	-	5610	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	39	6	-12	-3	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	-10	True	AATAAA	-19	NA	118181018	118150482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
Isoform_183041_3	chr8	+	2721	6	NIC	ENSMUSG00000034796.15	novel	3018	14	NA	NA	-25	0	intron_retention	FALSE	canonical	3	16	junction_2	3.18747549010185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACAGCCTGTGCCTTTCTT	NA	False	NA	2	True	AATAAA	-14	NA	123853230	123861919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_123854532_123855316_123855451_123856281_123856337_123856792_123857046_123860347_123860585_123861178
Isoform_183042_9	chr8	+	1114	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	3	-2	3	2	multi-exon	FALSE	canonical	2	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACATGGTGGTGTGTCTTT	3331	False	NA	3	True	NA	NA	NA	123899586	123905506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123899783_123904588
Isoform_183044_115	chr8	+	1579	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	2	-1	2	1	multi-exon	FALSE	canonical	3	85	junction_1	49.2958754190788	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACAGTTTGGCAATCCT	2151	False	NA	11	True	GATAAA	-12	NA	123951606	123958990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
Isoform_183045_10	chr8	+	1619	13	NIC	ENSMUSG00000033862.8	novel	1580	13	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	78.6862175564014	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTTTGGCAATCCTTT	2147	False	NA	13	True	GATAAA	-14	NA	123951602	123958992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955674_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
Isoform_183046_272	chr8	+	1619	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	26	-3	2	3	multi-exon	FALSE	canonical	3	205	junction_10	22.2279853638006	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTTTGGCAATCCTTT	2151	False	NA	13	True	GATAAA	-14	NA	123951606	123958992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
Isoform_18305_35	chr11	-	5537	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	112	6	-47	-3	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	-10	True	AATAAA	-19	NA	118180945	118150482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
Isoform_183050_5	chr8	+	2619	2	ISM	ENSMUSG00000001065.16	ENSMUST00000150356.8	2222	4	-33	-3	-33	3	intron_retention	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1677	False	NA	NA	False	NA	NA	NA	123980976	123984378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_123981663_123982445
Isoform_183051_4	chr8	+	2339	3	ISM	ENSMUSG00000001065.16	ENSMUST00000150356.8	2222	4	-26	-3	-26	3	intron_retention	FALSE	canonical	3	18	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1684	False	NA	NA	False	NA	NA	NA	123980983	123984378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_123981663_123982445_123982750_123983022
Isoform_183052_3	chr8	+	4051	10	NIC	ENSMUSG00000001065.16	novel	4111	10	NA	NA	-27	-5	intron_retention	FALSE	canonical	3	9	junction_5	5.45237517617124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCTGCCCAGAGTTGT	1683	False	NA	14	True	ATTAAA	-43	NA	123980982	123996477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985097_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994439_123994508
Isoform_183053_3	chr8	+	2706	10	NIC	ENSMUSG00000001065.16	novel	4111	10	NA	NA	-7	291	intron_retention	FALSE	canonical	3	9	junction_5	5.45237517617124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTGGTGCGCTGAGAT	1703	False	NA	NA	False	AATAAA	-15	NA	123981002	123995152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985097_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994439_123994508
Isoform_183056_16	chr8	+	2680	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	58	1333	-18	290	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTGGTGCGCTGAGA	1692	False	NA	NA	False	AATAAA	-14	NA	123980991	123995151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
Isoform_183058_3	chr8	+	3971	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	98	2	9	0	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCCAGAGTTGTTACTG	1732	False	NA	19	True	AGTAAA	-22	NA	123981031	123996482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
Isoform_183059_3	chr8	+	2764	10	NIC	ENSMUSG00000001065.16	novel	4071	11	NA	NA	-34	290	intron_retention	FALSE	canonical	3	13	junction_5	4.66137265853401	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTGGTGCGCTGAGA	1676	False	NA	NA	False	AATAAA	-14	NA	123980975	123995151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994439_123994508
Isoform_18306_48	chr11	-	4351	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	101	1203	50	0	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGCTACCAGTAGCAA	NA	False	NA	-15	True	GATAAA	-20	NA	118180956	118151679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
Isoform_183060_3	chr8	+	4064	10	NIC	ENSMUSG00000001065.16	novel	4071	11	NA	NA	-12	-9	intron_retention	FALSE	canonical	3	13	junction_5	4.66137265853401	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTTTGCTGCCCAGAG	1698	False	NA	10	True	ATTAAA	-39	NA	123980997	123996473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994439_123994508
Isoform_183061_369	chr8	+	2353	15	FSM	ENSMUSG00000010154.8	ENSMUST00000010298.7	2330	15	-22	-1	-22	1	multi-exon	FALSE	canonical	3	49	junction_7	8.26752930544105	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACATTGTCTCTTTCCCT	NA	False	NA	19	True	NA	NA	NA	124059429	124096255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_183064_14	chr8	+	2900	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-8	1	intron_retention	FALSE	canonical	3	49	junction_7	8.53811503108407	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACATTGTCTCTTTCCCT	NA	False	NA	19	True	NA	NA	NA	124059443	124096255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_183065_11	chr8	+	2292	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-1	5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	20.1212302140163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCTCTTTCCCTACAG	NA	False	NA	23	True	NA	NA	NA	124059450	124096259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124059760_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_18307_38	chr11	-	4413	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	39	1203	-12	0	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGCTACCAGTAGCAA	NA	False	NA	-15	True	GATAAA	-20	NA	118181018	118151679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
Isoform_183071_38	chr8	+	5023	17	FSM	ENSMUSG00000001472.18	ENSMUST00000211932.2	5002	17	-24	3	8	1	multi-exon	FALSE	canonical	3	455	junction_12	41.7738984744062	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100570	124130546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
Isoform_183077_22	chr8	+	2218	18	NIC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	17	100	combination_of_known_junctions	FALSE	canonical	2	14	junction_17	123.528291311445	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100539	124128070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127796
Isoform_183079_130	chr8	+	2217	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-40	561	0	100	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100522	124128070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
Isoform_183080_352	chr8	+	2170	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	7	561	7	100	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100569	124128070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
Isoform_183081_30	chr8	+	2417	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-240	561	-169	100	multi-exon	TRUE	canonical	3	157	junction_17	92.4052680533628	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100322	124128070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
Isoform_183084_18	chr8	+	4653	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	8	-1923	8	5	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100570	124130554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
Isoform_183087_61	chr8	+	2664	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	-81	-1	-11	1	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100480	124130546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
Isoform_183088_296	chr8	+	2574	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	9	-1	8	1	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100570	124130546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
Isoform_183090_19	chr8	+	2809	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	-226	-1	-156	1	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100335	124130546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
Isoform_183097_266	chr8	+	2571	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	79	-1	8	1	multi-exon	FALSE	canonical	3	129	junction_17	98.3685253625717	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100570	124130546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
Isoform_183098_84	chr8	+	2657	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	-7	-1	-7	1	multi-exon	FALSE	canonical	3	129	junction_17	98.3685253625717	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100484	124130546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
Isoform_183099_21	chr8	+	2791	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	-141	-1	-141	1	multi-exon	FALSE	canonical	3	129	junction_17	98.3685253625717	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100350	124130546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
Isoform_1831_16	chr10	-	1211	7	FSM	ENSMUSG00000000296.9	ENSMUST00000000305.7	1308	7	94	3	-9	-2	multi-exon	FALSE	canonical	3	31	junction_2	224.403654159196	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGGCTGGATCTTTTAT	NA	False	NA	-6	True	ATTAAA	-14	NA	31321860	31208374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_183114_164	chr8	+	1734	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	129	5	-37	-5	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCTGGTATTGGAGA	NA	False	NA	22	True	AATAAA	-22	NA	124138291	124148749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
Isoform_183115_34	chr8	+	1881	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	-18	5	-18	-5	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCTGGTATTGGAGA	NA	False	NA	22	True	AATAAA	-22	NA	124138144	124148749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
Isoform_183117_17	chr8	+	3269	14	FSM	ENSMUSG00000001482.16	ENSMUST00000108832.8	3242	14	-34	7	-15	1	multi-exon	FALSE	canonical	3	15	junction_2	108.849605816422	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124169709	124190002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124169791_124172836_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_183118_23	chr8	+	3205	13	FSM	ENSMUSG00000001482.16	ENSMUST00000001522.10	3214	13	5	4	-5	4	multi-exon	FALSE	canonical	3	16	junction_1	97.6160278278567	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTACTAGTCTGCCA	NA	False	NA	27	True	TATAAA	-16	NA	124169729	124190005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124169791_124172836_124172924_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_183119_9	chr8	+	3170	13	NIC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	99.5811715246523	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124169721	124190002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124169791_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_183120_374	chr8	+	3118	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	6	3	-4	-3	multi-exon	FALSE	canonical	3	130	junction_1	53.2429330273546	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	28	True	TATAAA	-17	NA	124169730	124190006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_183121_17	chr8	+	3215	12	NNC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	82.1393695681788	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124169724	124190002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_124169791_124174431_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_183122_35	chr8	+	3155	12	FSM	ENSMUSG00000001482.16	ENSMUST00000108830.2	3191	12	41	-5	41	-3	multi-exon	FALSE	canonical	3	18	junction_1	79.5842502795747	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	28	True	TATAAA	-17	NA	124170087	124190006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124170185_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_183126_28	chr8	+	3135	12	NIC	ENSMUSG00000001482.16	novel	589	4	NA	NA	-109	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	80.3485177058087	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124173811	124190002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124173893_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_183139_1301	chr8	+	2513	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-25	1739	-25	562	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACGTCTCAGATAAGAC	7470	False	NA	15	True	ATTAAA	-18	NA	124204616	124228916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
Isoform_183140_195	chr8	+	4251	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-25	1	-25	-1	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGGGAGTTTTGCC	7470	False	NA	15	True	TTTAAA	-19	NA	124204616	124230654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
Isoform_183150_45	chr8	+	1603	11	FSM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	77	1	-28	-1	multi-exon	FALSE	canonical	3	26	junction_4	6.18789140176199	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTCTGTCGTTGTGAG	NA	False	NA	6	True	AATGAA	-20	NA	124245649	124263388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124245692_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991_124260058_124263111
Isoform_183151_86	chr8	+	3427	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	-57	1	-57	-1	multi-exon	FALSE	canonical	3	44	junction_2	0.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTTGCTTATTCTAC	NA	False	NA	7	True	AATAAA	-19	NA	124380610	124390622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124380956_124382230_124382290_124387599
Isoform_183152_3	chr8	+	2781	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	-122	712	-122	-712	multi-exon	FALSE	canonical	3	44	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAGCATTGAGAACACA	NA	False	NA	NA	False	AATAAA	-23	NA	124380545	124389911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124380956_124382230_124382290_124387599
Isoform_183154_7	chr8	+	1945	7	FSM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	-58	-807	25	5	multi-exon	FALSE	canonical	0	0	junction_5	143.451211218309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACTGTCCTGCTCTGTGC	NA	False	NA	17	True	AATAAA	-26	NA	124532748	124562031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753
Isoform_183155_282	chr8	+	1398	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	25	-4	25	4	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACACTGTCCTGCTCTGTG	NA	False	NA	16	True	AATAAA	-25	NA	124532748	124562030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
Isoform_183156_18	chr8	+	1436	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	-19	2	-19	-2	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACAGTACACTGTCCTGC	NA	False	NA	10	True	AATAAA	-19	NA	124532704	124562024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
Isoform_183161_5	chr8	+	1934	7	NIC	ENSMUSG00000019478.18	novel	1080	7	NA	NA	-5	2	intron_retention	FALSE	canonical	0	0	junction_5	169.222486685428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACTGTCCTGCTCTG	NA	False	NA	14	True	AATAAA	-23	NA	124532718	124562028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557127_124559541_124559638_124560753
Isoform_183162_30	chr8	+	1360	8	NIC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	25	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	159.435483721121	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACACTGTCCTGCTCTGTG	NA	False	NA	16	True	AATAAA	-25	NA	124532748	124562030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557127_124559541_124559638_124560753_124560887_124561432
Isoform_183164_3	chr8	+	5154	8	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-16	-6663	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	32.4332910347831	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAATTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124748230	124768580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904
Isoform_183166_141	chr8	+	6082	10	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	31.2552217859494	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	20	True	AATAAA	-24	NA	124748250	124775243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
Isoform_18317_14	chr11	-	3528	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	182	-1	182	1	multi-exon	FALSE	canonical	3	24	junction_3	3.74165738677394	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAAGGTTGATTCCTTG	2448	False	NA	-6	True	AATAAA	-12	NA	118246150	118191893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
Isoform_18318_21	chr11	-	1008	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	180	2521	180	111	multi-exon	FALSE	canonical	3	24	junction_3	3.74165738677394	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTTCACGCTAGTGTG	2446	False	NA	-8	True	AATAAA	-15	NA	118246152	118194415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
Isoform_183182_362	chr8	+	4057	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	53	3	53	-3	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTCCGCCGCTGTCAG	8618	False	NA	29	True	AATAAA	-19	NA	124958182	125072458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
Isoform_183184_58	chr8	+	2731	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	4	1378	4	-1378	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTTTGGGTTTTCTTTT	8569	False	NA	5	True	ACTAAA	-23	NA	124958133	125071083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
Isoform_183189_35	chr8	+	4128	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	-16	1	-16	-1	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCCGCCGCTGTCAGTC	8549	False	NA	31	True	AATAAA	-21	NA	124958113	125072460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
Isoform_18319_3	chr11	-	2160	6	FSM	ENSMUSG00000033880.12	ENSMUST00000043722.10	2330	6	169	1	-51	-1	multi-exon	TRUE	canonical	1	1	junction_1	1.85472369909914	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGTTTGTTCATCCATA	9875	False	NA	NA	False	ATTAAA	-17	NA	118292749	118283577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118284949_118287416_118287670_118288946_118289079_118289205_118289398_118290553_118290628_118292611
Isoform_1832_13	chr10	-	1160	6	FSM	ENSMUSG00000000296.9	ENSMUST00000213639.2	827	6	-49	-284	8	3	multi-exon	FALSE	canonical	3	30	junction_2	219.239230066154	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATCTTTTATTTCTTT	NA	False	NA	0	True	ATTAAA	-20	NA	31321842	31208368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_31208966_31214180_31214242_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_183203_417	chr8	+	2772	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	51	2	-1	-2	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGAGTTATGTATCC	NA	False	NA	27	True	AATAAA	-17	NA	125247556	125278745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
Isoform_183206_6	chr8	+	5777	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	51	-3003	-1	3003	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	125247556	125281750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
Isoform_183207_10	chr8	+	2619	17	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	14	junction_11	58.0769963066273	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGAGTTATGTATCC	NA	False	NA	27	True	AATAAA	-17	NA	125247557	125278745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
Isoform_183208_15	chr8	+	4804	16	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	6	-3	intron_retention	FALSE	canonical	3	176	junction_7	27.5764795110294	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125247549	125278744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
Isoform_183214_109	chr8	+	2985	5	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	32	13	12	-13	intron_retention	FALSE	canonical	3	83	junction_2	14.0890028036054	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAGTTCAGTAACTAAG	NA	False	NA	8	True	AATAAA	-17	NA	125448909	125460849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535
Isoform_183217_16	chr8	+	1129	6	FSM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	30	6	10	-6	multi-exon	FALSE	canonical	3	19	junction_5	35.5111250173801	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTAACTAAGGTTGTCT	NA	False	NA	15	True	AATAAA	-24	NA	125448907	125460856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460545
Isoform_183218_10	chr8	+	2945	5	NIC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	12	-6	intron_retention	FALSE	canonical	3	31	junction_3	30.6634962129239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTAACTAAGGTTGTCT	NA	False	NA	15	True	AATAAA	-24	NA	125448909	125460856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457577_125457756_125458535
Isoform_183219_17	chr8	+	2959	5	NIC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	2	-9	intron_retention	FALSE	canonical	3	24	junction_2	37.5724300518346	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCAGTAACTAAGGTTG	NA	False	NA	12	True	AATAAA	-21	NA	125448899	125460853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_125449082_125451994_125452115_125455107_125455222_125457530_125457756_125458535
Isoform_183220_15	chr8	+	2922	5	ISM	ENSMUSG00000031982.6	ENSMUST00000212036.2	891	6	-6	-160	-6	-7	intron_retention	FALSE	canonical	3	24	junction_2	38.9767558937375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGTAACTAAGGTTGTC	NA	False	NA	14	True	AATAAA	-23	NA	125448891	125460855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_125449082_125451994_125452115_125455107_125455222_125457577_125457756_125458535
Isoform_183222_32	chr8	+	2915	16	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-7	-7	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	158.602984419167	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATACCCAATGGTCT	5152	False	NA	27	True	AATAAA	-18	NA	125589803	125616789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_125590052_125597514_125597698_125600071_125600219_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
Isoform_18323_96	chr11	-	4119	4	FSM	ENSMUSG00000025575.15	ENSMUST00000017620.10	4182	4	63	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	3.68178700572909	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9021	False	NA	-1	True	AATAAA	-17	NA	118309849	118297114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399
Isoform_183230_1319	chr8	+	2945	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	32	7	-7	-7	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATACCCAATGGTCT	5152	False	NA	27	True	AATAAA	-18	NA	125589803	125616789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
Isoform_183253_3	chr8	+	5258	4	ISM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	2	2	2	-2	intron_retention	FALSE	canonical	3	78	junction_2	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTTGATGTGTCTTTC	NA	False	NA	7	True	AATAAA	-16	NA	125624626	125632898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363
Isoform_183254_188	chr8	+	4456	5	FSM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	10	-2	10	2	multi-exon	FALSE	canonical	3	61	junction_4	8.10478253872366	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGATGTGTCTTTCCGGT	NA	False	NA	11	True	AATAAA	-20	NA	125624634	125632902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628632_125629429
Isoform_183255_45	chr8	+	4492	5	FSM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	-30	2	-30	-2	multi-exon	FALSE	canonical	3	61	junction_4	8.10478253872366	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTTGATGTGTCTTTC	NA	False	NA	7	True	AATAAA	-16	NA	125624594	125632898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628632_125629429
Isoform_183258_13	chr8	+	4323	4	NIC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	34.7786652353933	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGGTTGATGTGTCTT	NA	False	NA	5	True	AATAAA	-14	NA	125624632	125632896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_125625121_125625814_125625915_125628363_125628632_125629429
Isoform_183261_672	chr8	+	2325	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	69	-3	17	3	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTGGTTAAGCTTTTA	5263	False	NA	12	True	AATAAA	-17	NA	125739804	125760934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
Isoform_183263_148	chr8	+	2398	7	NNC	ENSMUSG00000056820.8	novel	2391	6	NA	NA	-25	2	at_least_one_novel_splicesite	FALSE	non_canonical	3	186	junction_6	94.8958493413817	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCTGGTTAAGCTTTT	5169	False	NA	11	True	AATAAA	-16	NA	125739710	125760933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235_125760181_125760200
Isoform_183265_25	chr8	+	2479	7	NNC	ENSMUSG00000056820.8	novel	2391	6	NA	NA	-105	3	at_least_one_novel_splicesite	FALSE	non_canonical	3	186	junction_6	94.8958493413817	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTGGTTAAGCTTTTA	5089	False	NA	12	True	AATAAA	-17	NA	125739630	125760934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235_125760181_125760200
Isoform_183269_8	chr8	+	1482	4	FSM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	12	3	12	-3	multi-exon	FALSE	canonical	3	8	junction_3	41.4273125150814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCCATGTCTAATTAGT	NA	False	NA	NA	False	ACTAAA	-12	NA	126460988	126465915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126464793
Isoform_18327_205	chr11	-	2824	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	50	-1	21	1	multi-exon	FALSE	canonical	3	81	junction_4	37.662979170533	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTCTATGTTGGCT	9042	False	NA	0	True	AATAAA	-18	NA	118309828	118297113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309755
Isoform_183270_29	chr8	+	1125	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	30	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGAGTCCTTGTGTGGG	NA	False	NA	23	True	AATAAA	-31	NA	126460971	126474974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
Isoform_183274_5	chr8	+	1496	4	NNC	ENSMUSG00000031851.15	novel	1497	4	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	41.9602986961088	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCCATGTCTAATTAG	NA	False	NA	NA	False	ACTAAA	-11	NA	126460968	126465914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_126461089_126462806_126462965_126464061_126464159_126464793
Isoform_183277_12	chr8	+	1115	5	NNC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	25.0499500997507	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACAGGAGTCCTTGTGTG	NA	False	NA	21	True	AATAAA	-29	NA	126460974	126474972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_126461089_126462806_126462965_126464061_126464159_126471974_126472185_126474436
Isoform_183279_74	chr8	+	2233	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	1	1	1	-1	multi-exon	FALSE	canonical	3	118	junction_2	9	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGGTTTATTACAAC	NA	False	NA	20	True	AATAAA	-17	NA	126721909	126757423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_126722554_126751750_126752147_126756230
Isoform_183293_3	chr8	+	2802	7	FSM	ENSMUSG00000057060.9	ENSMUST00000108759.3	2309	7	-4	-489	-4	0	multi-exon	FALSE	canonical	0	0	junction_2	2.96741563579414	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAAAAAAAAGC	NA	False	NA	NA	False	AATAAA	-8	NA	127025292	127122710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127025601_127047737_127048063_127108853_127109074_127113567_127113694_127115821_127116015_127117782_127117873_127121170
Isoform_183294_68	chr8	+	636	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	13	98	0	-10	multi-exon	FALSE	canonical	3	239	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATACATTGTTTATTT	NA	False	NA	-91	True	TATAAA	-11	NA	127149266	127152074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127149570_127151741
Isoform_183295_56	chr8	+	768	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	-19	-2	-19	2	multi-exon	FALSE	canonical	3	239	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTTCTGGCAGT	NA	False	NA	9	True	AATAAA	-20	NA	127149234	127152174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127149570_127151741
Isoform_183297_3	chr8	+	1049	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	-19	-283	-19	283	multi-exon	FALSE	canonical	3	239	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAATTAAAAAACAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	127149234	127152455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127149570_127151741
Isoform_18330_52	chr11	-	2809	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106287.8	1476	5	22	-1355	-7	0	multi-exon	FALSE	canonical	3	11	junction_4	67.913547985656	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9014	False	NA	-1	True	AATAAA	-17	NA	118309856	118297114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309797
Isoform_183300_34	chr8	+	4684	16	FSM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	0	-2	0	2	multi-exon	FALSE	canonical	3	39	junction_15	26.9315180906437	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGTATGTATTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	127790819	128129060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
Isoform_183301_17	chr8	+	4860	16	FSM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	-181	3	-4	-3	multi-exon	FALSE	canonical	3	39	junction_15	26.9315180906437	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACTTTGTATGTAT	NA	False	NA	NA	False	AATAAA	-10	NA	127790638	128129055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
Isoform_183303_5	chr8	+	3699	21	FSM	ENSMUSG00000025812.19	ENSMUST00000079777.12	3394	21	14	-319	0	0	multi-exon	FALSE	canonical	3	22	junction_20	36.1848034401183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGCTGTTGACGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	127790819	128159625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
Isoform_183304_4	chr8	+	3880	21	FSM	ENSMUSG00000025812.19	ENSMUST00000079777.12	3394	21	-172	-314	-9	-2	multi-exon	FALSE	canonical	3	22	junction_20	36.1848034401183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	127790633	128159620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
Isoform_183306_3	chr8	+	6155	25	FSM	ENSMUSG00000025812.19	ENSMUST00000160272.8	5815	25	-341	1	-178	-1	multi-exon	FALSE	canonical	3	28	junction_17	33.9451917311814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	12	True	AATAAA	-20	NA	127790464	128338766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
Isoform_183307_10	chr8	+	6003	25	FSM	ENSMUSG00000025812.19	ENSMUST00000160272.8	5815	25	-189	1	-26	-1	multi-exon	FALSE	canonical	3	28	junction_17	33.9451917311814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	12	True	AATAAA	-20	NA	127790616	128338766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
Isoform_183310_5	chr8	+	5800	24	FSM	ENSMUSG00000025812.19	ENSMUST00000026921.13	4050	24	-269	-1481	-30	0	multi-exon	FALSE	canonical	3	7	junction_17	35.6545068165681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	127790775	128338767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
Isoform_183312_12	chr8	+	4696	16	NIC	ENSMUSG00000025812.19	novel	4682	16	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	20	junction_15	30.4321467457614	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATGTATTGTTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	127790819	128129063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
Isoform_183314_12	chr8	+	4848	16	NIC	ENSMUSG00000025812.19	novel	4682	16	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_15	30.4321467457614	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTTGTATGTATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	127790662	128129058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
Isoform_183315_6	chr8	+	3696	21	NIC	ENSMUSG00000025812.19	novel	3394	21	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	38.4076489777753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	127790826	128159620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
Isoform_183318_22	chr8	+	4189	14	FSM	ENSMUSG00000025812.19	ENSMUST00000160717.8	4214	14	25	0	-2	0	multi-exon	FALSE	canonical	3	35	junction_1	34.055645380003	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTTGTATGTATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	128026090	128129058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
Isoform_183319_4	chr8	+	3112	19	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	42.143347380044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	128026089	128159620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128159275
Isoform_183320_4	chr8	+	3197	19	FSM	ENSMUSG00000025812.19	ENSMUST00000162456.8	3204	19	2	5	2	-2	multi-exon	FALSE	canonical	3	22	junction_18	40.1787671952903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	128026094	128159620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
Isoform_183321_6	chr8	+	5305	23	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	36.9285942648805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	12	True	AATAAA	-20	NA	128026092	128338766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
Isoform_183322_4	chr8	+	3163	18	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	7	junction_15	42.4209421415877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGTTGACGAGTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	128026091	128159628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128159275
Isoform_183324_7	chr8	+	4194	14	NIC	ENSMUSG00000025812.19	novel	4214	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_13	37.2228217836647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTTGTATGTATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	128026094	128129058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
Isoform_183325_4	chr8	+	3208	19	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_13	42.2897486337549	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTAGTGGCTGTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	128026091	128159619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
Isoform_183328_27	chr8	+	2204	4	FSM	ENSMUSG00000025812.19	ENSMUST00000159940.2	746	4	-21	-1437	-21	-1	multi-exon	FALSE	canonical	3	17	junction_1	28.2410261066335	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	12	True	AATAAA	-20	NA	128306183	128338766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_128306285_128319541_128319663_128329539_128329668_128336912
Isoform_18333_25	chr11	-	2997	5	FSM	ENSMUSG00000025575.15	ENSMUST00000092378.10	2995	5	-1	-1	-1	0	multi-exon	TRUE	canonical	3	9	junction_4	68.7786304021823	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9020	False	NA	-1	True	AATAAA	-17	NA	118309850	118297114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309755
Isoform_183331_37	chr8	+	3810	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	1	4	1	-4	multi-exon	TRUE	canonical	3	487	junction_6	37.7685348169905	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATTTGTTTTGGCTCTG	NA	False	NA	12	True	AATAAA	-18	NA	129412135	129459677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
Isoform_183333_982	chr8	+	3709	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	101	5	-2	-5	multi-exon	FALSE	canonical	3	487	junction_6	37.7685348169905	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATTTGTTTTGGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	129412235	129459676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
Isoform_18334_8	chr11	-	2959	5	NIC	ENSMUSG00000025575.15	novel	2995	5	NA	NA	-10	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	71.8065978862667	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTCTCTTGTCTATG	9011	False	NA	-6	True	AATAAA	-12	NA	118309859	118297119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309797
Isoform_18335_7	chr11	-	3535	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	41	4	-17	-4	multi-exon	TRUE	canonical	3	19	junction_4	2.91547594742265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGACACGTGTCTTGGCT	NA	False	NA	NA	False	AATATA	-10	NA	118931754	118927134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
Isoform_183356_5	chr8	+	403	4	FSM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	-25	756	-25	-756	multi-exon	FALSE	canonical	3	25	junction_3	15.5777619273972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGCAAACTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	129990096	130008569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463
Isoform_183357_4	chr8	+	505	4	FSM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	-30	659	-30	-659	multi-exon	FALSE	canonical	3	25	junction_3	15.5777619273972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGGATTGTGGAAATTC	NA	False	NA	NA	False	NA	NA	NA	129990091	130008666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463
Isoform_183358_19	chr8	+	2941	4	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-35	2265	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	15.5777619273972	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGCCTTGGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	129990086	130011590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_129990206_130007503_130007631_130007817_130007879_130008956
Isoform_183359_3	chr8	+	4389	4	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-27	3721	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	15.5777619273972	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGTGCTCAGCAATTA	NA	False	NA	NA	False	ATTAAA	-20	NA	129990094	130013046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_129990206_130007503_130007631_130007817_130007879_130008956
Isoform_183369_23	chr8	+	565	2	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	105	24501	105	-14891	5prime_fragment	FALSE	canonical	3	882	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	20016570	20030997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_20016689_20030550
Isoform_18337_24	chr11	-	1373	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	72	2135	14	613	multi-exon	FALSE	canonical	3	19	junction_4	2.91547594742265	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTCTTTTATTTAAAC	NA	False	NA	-2	True	AATATA	-15	NA	118931723	118929265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
Isoform_18338_23	chr11	-	1405	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	41	2134	-17	614	multi-exon	FALSE	canonical	3	19	junction_4	2.91547594742265	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCTTTTATTTAAACG	NA	False	NA	-1	True	AATATA	-16	NA	118931754	118929264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
Isoform_183383_25	chr8	+	2246	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-2740	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTTTATGAGTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	19834749	20043148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
Isoform_183385_3	chr8	+	4299	5	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	-18	-733	multi-exon	FALSE	canonical	3	200	junction_2	399.990234255788	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAAGCTTCCAGAGCAT	NA	False	NA	NA	False	TATAAA	-19	NA	20697966	20726533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120_20721241_20723149
Isoform_183387_20	chr8	+	4809	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-177	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834749	20045711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
Isoform_18339_82	chr11	-	2653	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-57	2583	-57	1217	multi-exon	FALSE	canonical	3	62	junction_3	7	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGTCCGAGATTAGC	NA	False	NA	-1	True	ATTAAA	-20	NA	118977104	118970981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
Isoform_18340_118	chr11	-	2614	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-18	2583	-18	1217	multi-exon	FALSE	canonical	3	62	junction_3	7	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGTCCGAGATTAGC	NA	False	NA	-1	True	ATTAAA	-20	NA	118977065	118970981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
Isoform_183407_3	chr8	+	653	2	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17374	-14892	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACAAACAAA	5838	False	NA	NA	False	NA	NA	NA	21090238	21107895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_21090445_21107448
Isoform_183411_4	chr8	+	4653	5	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17285	-180	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	210.10771047251	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	5927	False	NA	NA	False	AATAAA	-14	NA	21090327	21122607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_21090445_21107448_21107655_21112754_21113054_21116684_21116805_21118696
Isoform_183422_6	chr8	+	5569	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-356	-592	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	48.5083676121457	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGAATTTAATGGAAAAT	NA	False	NA	6	True	AATAAA	-18	NA	124747890	124774651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_124748266_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
Isoform_183423_53	chr8	+	5821	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	48.5083676121457	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	20	True	AATAAA	-24	NA	124748230	124775243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_124748266_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
Isoform_183425_12	chr8	+	6122	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-317	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	48.5083676121457	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	20	True	AATAAA	-24	NA	124747929	124775243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_124748266_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
Isoform_183426_50	chr8	+	3325	24	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	81303	-4	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	35.9048311486207	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	NA	False	NA	7	True	AATAAA	-19	NA	118306332	118361877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_118306416_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_183431_15	chr8	+	1385	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5971	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	77.3801492632316	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCCAATCTCCTCAAAGA	693	False	NA	2	True	NA	NA	NA	70611401	70620135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
Isoform_183432_6	chr8	+	1481	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5878	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	77.3801492632316	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	600	False	NA	5	True	NA	NA	NA	70611308	70620138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
Isoform_183434_8	chr8	+	1553	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5840	4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	79.2668554630496	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCTCAAAGATCTCTTT	562	False	NA	9	True	NA	NA	NA	70611270	70620142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
Isoform_183437_6	chr8	+	3518	17	NNC	ENSMUSG00000031565.19	novel	3332	11	NA	NA	-7431	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	84.1614659078013	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTATCCTGGGCGTG	NA	False	NA	12	True	AATAAA	-15	NA	26038201	26064798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_26038487_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_183438_9	chr8	+	3502	17	NNC	ENSMUSG00000031565.19	novel	1903	13	NA	NA	-7401	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	82.2093364527412	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26038231	26064806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_26038487_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_183439_7	chr8	+	3633	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.4157853461422	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1061	False	NA	26	True	AATAAA	-17	NA	70686844	70715755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_70686937_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
Isoform_183440_8	chr8	+	3882	13	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	31.1430391723237	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1071	False	NA	26	True	AATAAA	-17	NA	70686854	70715755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_70686937_70687043_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
Isoform_183441_3	chr8	+	4533	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-31	0	intron_retention	FALSE	canonical	2	7	junction_1	32.25569332794	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1061	False	NA	26	True	AATAAA	-17	NA	70686844	70715755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_70686937_70687043_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
Isoform_183443_5	chr8	+	3259	13	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-163	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	50.6959208308606	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72021362	72039947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_72021436_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_183444_12	chr8	+	2489	12	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-156	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.4179011754225	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72021369	72039352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_72021436_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_183447_18	chr8	+	1984	17	NNC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	137.596202141447	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85416049	85426416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_85416075_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_183451_5	chr8	+	4309	2	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21091	-3725	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCTTGAATATAGTGT	5298	False	NA	NA	False	AATAAA	-24	NA	20555608	20580612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_20555835_20576529
Isoform_183453_5	chr8	+	1108	4	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21096	3969	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	4.49691252107735	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGGTGTCTGTTAACAA	5293	False	NA	NA	False	NA	NA	NA	20555603	20588306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_20555835_20576529_20576922_20584150_20584338_20588008
Isoform_183454_5	chr8	+	3285	6	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-20987	9476	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	12.4354332453679	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTGAAGTTTCTTCAA	5402	False	NA	13	True	NA	NA	NA	20555712	20593813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_20555835_20576529_20576922_20584150_20584338_20588008_20588273_20590632_20590713_20591573
Isoform_183455_4	chr8	+	3400	6	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21102	9476	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	12.4354332453679	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTGAAGTTTCTTCAA	5287	False	NA	13	True	NA	NA	NA	20555597	20593813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_20555835_20576529_20576922_20584150_20584338_20588008_20588273_20590632_20590713_20591573
Isoform_183456_5	chr8	+	2018	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-486	3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	3	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGGATTCTTATTTTT	NA	False	NA	25	True	AATAAA	-19	NA	33875866	33907498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_33876092_33876357_33877237_33906584
Isoform_183457_5	chr8	+	2228	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-698	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	3	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTTGGATTCTTATTT	NA	False	NA	23	True	AATAAA	-17	NA	33875654	33907496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_33876092_33876357_33877237_33906584
Isoform_183461_4	chr8	+	4677	17	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-6	101	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	15.119833828452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCGTCCATCTTGTAA	NA	False	NA	109	True	TATAAA	-12	NA	89423696	89475184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_89423822_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
Isoform_183462_4	chr8	+	4613	17	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	2	31	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	15.119833828452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTACTCCTTGGTTTT	NA	False	NA	39	True	TATAAA	-21	NA	89423690	89475114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_89423822_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
Isoform_18347_15	chr11	-	2882	12	FSM	ENSMUSG00000039976.5	ENSMUST00000207655.2	2855	12	-28	1	10	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.02055552462662	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAGAAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	119119315	119037961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714_119044902_119045907_119046043_119046845_119046995_119047468_119047634_119048565_119048714_119049556_119049719_119099596_119100195_119101330_119101567_119119221
Isoform_183471_10	chr8	+	2916	20	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1837	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	58.1943919773867	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72132815	72143219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_72132862_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
Isoform_183472_5	chr8	+	2138	5	NNC	ENSMUSG00000056608.15	novel	2279	5	NA	NA	-38	-7	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	2.27760839478607	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAGAGGAAAAAATATG	4137	False	NA	4	True	TATAAA	-45	NA	91635203	91703568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_91635264_91658876_91660491_91683010_91683343_91699752_91699865_91703548
Isoform_183473_13	chr8	+	2166	15	NNC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-8574	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1166242552912	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTCTCTTTCCCTAC	1280	False	NA	21	True	NA	NA	NA	124068415	124096257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_124068557_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_183474_8	chr8	+	2195	15	NNC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-8601	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1166242552912	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCTCTTTCCCTACAG	1253	False	NA	23	True	NA	NA	NA	124068388	124096259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_124068557_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_183475_24	chr8	+	1607	5	NNC	ENSMUSG00000005413.9	novel	1569	5	NA	NA	120	1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	92.3102784092866	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	11	True	AATAAA	-20	NA	75820368	75827218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_75820558_75822483_75822605_75823477_75823970_75825393_75825494_75826513
Isoform_18348_8	chr11	-	2917	12	FSM	ENSMUSG00000039976.5	ENSMUST00000036113.4	6986	12	-22	4091	-22	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.08100420768356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAGAAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	119119347	119037961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714_119044902_119045907_119046043_119046845_119046995_119047468_119047637_119048565_119048714_119049556_119049719_119099596_119100195_119101330_119101567_119119221
Isoform_183481_22	chr8	+	2477	21	NNC	ENSMUSG00000034112.10	novel	3222	27	NA	NA	33724	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2.80133896556629	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCATCTCTCTCTCTGCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	120460532	120484456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_120460562_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713_120482856_120484106
Isoform_183483_3	chr8	+	4470	16	NNC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-45089	-4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	38.9010139827857	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCACTTTGTATGTA	8463	False	NA	NA	False	AATAAA	-9	NA	127853064	128129054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_127853252_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
Isoform_183489_18	chr8	+	2709	8	NNC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	7080	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	102.321422338569	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124181000	124190002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_124181171_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_18349_17	chr11	-	2866	12	FSM	ENSMUSG00000039976.5	ENSMUST00000036113.4	6986	12	29	4091	-9	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.08100420768356	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAGAAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	119119296	119037961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714_119044902_119045907_119046043_119046845_119046995_119047468_119047637_119048565_119048714_119049556_119049719_119099596_119100195_119101330_119101567_119119221
Isoform_183496_14	chr8	+	1576	4	NNC	ENSMUSG00000031562.17	novel	799	6	NA	NA	25952	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	153.599045135921	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACGTGTTTGCTTTTAT	NA	False	NA	7	True	ATTAAA	-13	NA	48589197	48594697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_48589240_48590292_48590410_48591816_48591914_48593377
Isoform_183497_5	chr8	+	4972	5	NNC	ENSMUSG00000031631.16	novel	4619	5	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	13	junction_1	18.8729303501073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGTTTTGATTCTGTT	NA	False	NA	12	True	AATAAA	-13	NA	46616743	46648621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_46617202_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_18350_5	chr11	-	2401	3	ISM	ENSMUSG00000039976.5	ENSMUST00000207655.2	2855	12	-10	60145	-10	3361	5prime_fragment	FALSE	canonical	2	4	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCGGAGAGTATGTGAC	NA	False	NA	NA	False	AATAAA	-21	NA	119119297	119098105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_119100195_119101330_119101567_119119221
Isoform_183500_11	chr8	+	2648	13	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-150	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	50.2843995025628	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCCTGGCTGTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	72023148	72039348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_72023210_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_183505_5	chr8	+	2563	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-135	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	72.45798782743	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCATGACTCTTTATTGA	3611	False	NA	80	True	ATTAAA	-20	NA	105897170	105944619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_105897202_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
Isoform_183507_8	chr8	+	2470	7	NNC	ENSMUSG00000041515.11	novel	764	4	NA	NA	-674	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	15.0489940601431	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAATGTTTGTTTCTTT	NA	False	NA	15	True	ATTAAA	-19	NA	121471544	121483430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_121471582_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
Isoform_183508_8	chr8	+	3132	2	NNC	ENSMUSG00000005470.9	novel	369	3	NA	NA	-31	-8810	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5892	False	NA	NA	False	NA	NA	NA	84682311	84685666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_84685147_84685369
Isoform_183509_7	chr8	+	3559	26	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	75394	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.3049615188719	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	NA	False	NA	7	True	AATAAA	-19	NA	118300423	118361877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_118300566_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_183511_5	chr8	+	3697	12	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	5360	-1	intron_retention	FALSE	canonical	1	4	junction_1	37.6161561913438	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATCTCTGGAAATGTCGT	NA	False	NA	30	True	ATTAAA	-15	NA	79241563	79460630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_79241975_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
Isoform_183514_3	chr8	+	3069	2	Intergenic	novelGene_11062	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTGTGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	126687043	126694964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_126687171_126692022
Isoform_183515_3	chr8	+	6538	16	NNC	ENSMUSG00000031822.21	novel	672	4	NA	NA	21093	-8	at_least_one_novel_splicesite	TRUE	canonical	2	13	junction_1	32.980128697276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGAAATTCATCTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	121236278	121308121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_121236403_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_183517_3	chr8	+	1472	4	NNC	ENSMUSG00000104168.2	novel	766	2	NA	NA	-144	4154	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	1.69967317119759	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTGTCTATATTTT	NA	False	NA	NA	False	NA	NA	NA	106292811	106308895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_106292907_106293000_106293103_106304178_106304486_106307927
Isoform_183520_3	chr8	+	751	3	NNC	ENSMUSG00000110058.2	novel	514	3	NA	NA	-4652	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTCTGGTAATTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	14044287	14053561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_14044585_14052843_14053014_14053277
Isoform_183522_5	chr8	+	2096	21	NNC	ENSMUSG00000034390.17	novel	4693	15	NA	NA	-5720	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.4737744443579	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	118070188	118186153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_118070231_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
Isoform_183523_3	chr8	+	2255	21	NNC	ENSMUSG00000034390.17	novel	4693	15	NA	NA	-5879	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.4737744443579	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	118070029	118186153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_118070231_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
Isoform_183524_4	chr8	+	4223	19	NNC	ENSMUSG00000031666.16	novel	863	5	NA	NA	12319	-3	intron_retention	FALSE	canonical	1	1	junction_1	6.27064491534332	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTCTCTGTTTAGTTA	8687	False	NA	NA	False	AATAAA	-10	NA	91809104	91850467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_91809155_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
Isoform_183528_5	chr8	+	1325	3	NNC	ENSMUSG00000005699.17	novel	1234	3	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	12	True	ATTAAA	-18	NA	106427780	106430126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_106427999_106428805_106429029_106429242
Isoform_183530_3	chr8	+	458	2	Intergenic	novelGene_10789	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCTGCCTTCTTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	86200130	86201385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_86200287_86201083
Isoform_183532_4	chr8	+	1879	9	NNC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.34322329798262	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTCCCTTGTCTCA	NA	False	NA	7	True	AATAAA	-20	NA	110432147	110451563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_110432197_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_183536_3	chr8	+	4684	5	NNC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.0809522925988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTTGATGTGTCTTT	NA	False	NA	6	True	AATAAA	-15	NA	125624633	125632897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_125625353_125625814_125625915_125626945_125627075_125628363_125628632_125629429
Isoform_183537_4	chr8	+	1912	2	Antisense	novelGene_ENSMUSG00000031974.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCCTGTTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-18	NA	124705649	124708896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_124705815_124707149
Isoform_183540_4	chr8	+	778	3	NNC	ENSMUSG00000034361.11	novel	2342	16	NA	NA	5720	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGGCTTTTTCTAAGT	NA	False	NA	NA	False	AATAAA	-13	NA	95294997	95297014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_95295123_95295218_95295456_95296598
Isoform_183542_3	chr8	+	3181	10	NNC	ENSMUSG00000049577.16	novel	865	5	NA	NA	-998	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.1787983023002	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCGCTGGAGGCCCAGC	NA	False	NA	7	True	AATAAA	-16	NA	123007881	123063987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_123008058_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
Isoform_183546_15	chr8	-	2968	4	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	-1	1	intron_retention	FALSE	canonical	2	6	junction_1	61.937244225282	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCAGCCTCTGCTTTC	NA	False	NA	-7	True	AATAAA	-13	NA	71834605	71826769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71828147_71828392_71828918_71831032_71831128_71833634
Isoform_183551_3	chr8	-	206	1	Intergenic	novelGene_10608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAGAAAAAAAAAAACCCAC	NA	False	NA	NA	False	NA	NA	NA	36617143	36616937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_36616900_36617100
Isoform_183554_37	chr8	-	186	1	Genic_Genomic	ENSMUSG00000031523.17	novel	NA	NA	NA	NA	9339	6	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATTGAATTTGCTTCT	NA	False	NA	-7	True	NA	NA	NA	37035084	37034898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_37034900_37035100
Isoform_183558_16	chr8	-	3180	1	NIC	ENSMUSG00000031523.17	novel	6159	14	NA	NA	-27	-17491	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37081055	37077875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_37077900_37081100
Isoform_183559_78	chr8	-	174	1	Intergenic	novelGene_10609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAGAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	37103441	37103267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_37103300_37103400
Isoform_183560_3	chr8	+	175	1	Intergenic	novelGene_10610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAATGACTATT	NA	False	NA	NA	False	NA	NA	NA	37657843	37658018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_37657800_37658000
Isoform_183563_136	chr8	-	178	1	Intergenic	novelGene_10611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	38609541	38609363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_38609400_38609500
Isoform_183564_13	chr8	+	171	1	Intergenic	novelGene_10612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTAAAGTCTGTAGGATA	NA	False	NA	NA	False	NA	NA	NA	38762783	38762954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_38762800_38763000
Isoform_183566_3	chr8	-	194	1	Intergenic	novelGene_10613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAAGTGTGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	39556629	39556435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_39556400_39556600
Isoform_183567_3	chr8	-	532	1	FSM	ENSMUSG00000098431.3	ENSMUST00000183849.3	55	1	-39	-438	-39	438	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACGGGTTTTCATCATT	NA	False	NA	NA	False	AATAAA	-17	NA	40761009	40760477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_40760500_40761000
Isoform_183568_3	chr8	-	971	1	FSM	ENSMUSG00000098431.3	ENSMUST00000183849.3	55	1	-478	-438	-478	438	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACGGGTTTTCATCATT	NA	False	NA	NA	False	AATAAA	-17	NA	40761448	40760477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_40760500_40761400
Isoform_183569_11	chr8	-	185	1	Intergenic	novelGene_10614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATATGGA	4796	False	NA	NA	False	NA	NA	NA	40894259	40894074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_40894100_40894300
Isoform_183572_9	chr8	+	1482	2	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-33	-14739	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	4663133	4664641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_+_4663699_4663724
Isoform_183573_8	chr8	+	225	1	Intergenic	novelGene_10615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGCACATTAAAAAAAATAA	NA	False	NA	NA	False	GGGGCT	-22	NA	41400428	41400653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_41400400_41400700
Isoform_183576_16	chr8	+	177	1	Intergenic	novelGene_10616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTAAAAAAAAGCAACAAAC	NA	False	NA	NA	False	NA	NA	NA	41551698	41551875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_41551700_41551900
Isoform_183577_29	chr8	+	177	1	Intergenic	novelGene_10617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTTACTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	41593229	41593406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_41593200_41593400
Isoform_183580_5	chr8	-	167	1	Intergenic	novelGene_10618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	41627358	41627191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_41627200_41627400
Isoform_183582_3	chr8	+	1341	1	NIC	ENSMUSG00000031592.11	novel	2631	10	NA	NA	4	-18170	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATTCTC	NA	False	NA	NA	False	NA	NA	NA	41692792	41694133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_41692800_41694100
Isoform_183583_4	chr8	-	193	1	Intergenic	novelGene_10620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATATTTTCCAAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	41713275	41713082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_41713100_41713300
Isoform_183584_79	chr13	-	177	1	Intergenic	novelGene_3284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATAATTGATGT	NA	False	NA	NA	False	NA	NA	NA	100701441	100701264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_100701300_100701400
Isoform_183585_3	chr8	-	2326	1	Intergenic	novelGene_10622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTACTTTTAGTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	41791373	41789047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_41789000_41791400
Isoform_183589_5	chr8	+	1013	1	Intergenic	novelGene_10623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	41827887	41828900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_41827900_41828900
Isoform_183591_13	chr8	+	195	1	Intergenic	novelGene_10624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAAAACTTGAAGATCT	NA	False	NA	NA	False	NA	NA	NA	42416400	42416595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_42416400_42416600
Isoform_183592_3	chr8	+	214	1	Intergenic	novelGene_10625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTCTATCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	43356250	43356464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_43356200_43356500
Isoform_183595_5	chr8	-	170	1	Intergenic	novelGene_10626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATTA	1758	False	NA	NA	False	NA	NA	NA	43602037	43601867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_43601900_43602000
Isoform_183596_11	chr8	+	1356	1	Genic_Genomic	ENSMUSG00000091490.4	novel	NA	NA	NA	NA	-6	-5473	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43633571	43634927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_43633600_43634900
Isoform_1836_255	chr10	-	1108	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	-3	-2	-2	1	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGATCTTTTATTTCT	NA	False	NA	-2	True	ATTAAA	-18	NA	31321853	31208370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_18360_89	chr11	-	1516	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	-7	0	-7	0	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190922	119179188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
Isoform_183602_9	chr14	-	212	1	Intergenic	novelGene_3456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATGTAGAA	NA	False	NA	NA	False	NA	NA	NA	34158066	34157854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_34157900_34158100
Isoform_18361_2611	chr11	-	1437	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	72	0	1	0	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	2611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190843	119179188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
Isoform_183619_7	chr8	+	175	1	Intergenic	novelGene_10628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGACAAAAGGTCT	NA	False	NA	NA	False	NA	NA	NA	43776973	43777148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_43777000_43777100
Isoform_183620_8	chr8	+	1741	1	Intergenic	novelGene_10629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAACCAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	43806967	43808708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_43807000_43808700
Isoform_183622_3	chr8	+	4031	1	Intergenic	novelGene_10630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	45391207	45395238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_45391200_45395200
Isoform_183624_7	chr8	+	150	1	Intergenic	novelGene_10631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAATAATAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	45686199	45686349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_45686200_45686300
Isoform_183626_18	chr8	+	168	1	Intergenic	novelGene_10632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAGTCAATTG	NA	False	NA	NA	False	NA	NA	NA	46613261	46613429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_46613300_46613400
Isoform_183632_59	chr8	+	186	1	Intergenic	novelGene_10633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAAAACAGTCAT	NA	False	NA	NA	False	NA	NA	NA	46666121	46666307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_46666100_46666300
Isoform_183633_3	chr8	-	155	1	Intergenic	novelGene_10634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATTAACAAA	9220	False	NA	NA	False	NA	NA	NA	46755840	46755685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_46755700_46755800
Isoform_183634_15	chr8	-	164	1	Intergenic	novelGene_10635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTGAAAAAAAAAAAG	3649	False	NA	NA	False	NA	NA	NA	46761411	46761247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_46761200_46761400
Isoform_183635_6	chr8	+	171	1	Intergenic	novelGene_10636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTTTTTTAAAAAAACCC	4188	False	NA	NA	False	NA	NA	NA	46894737	46894908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_46894700_46894900
Isoform_183636_16	chr8	+	1383	1	FSM	ENSMUSG00000018796.14	ENSMUST00000211289.2	1253	1	-131	1	9	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	2215	False	NA	NA	False	NA	NA	NA	46924082	46925465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_46924100_46925500
Isoform_183645_3	chr8	+	176	1	Intergenic	novelGene_10637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAGAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	47159121	47159297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_47159100_47159300
Isoform_183646_20	chr8	-	182	1	Intergenic	novelGene_10638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47189625	47189443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_47189400_47189600
Isoform_183648_23	chr8	-	160	1	Intergenic	novelGene_10639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47788536	47788376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_47788400_47788500
Isoform_183649_10	chr8	-	168	1	Intergenic	novelGene_10640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATAGATATGTAATA	NA	False	NA	NA	False	NA	NA	NA	47799770	47799602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_47799600_47799800
Isoform_183650_19	chr8	-	176	1	Intergenic	novelGene_10641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAGTAAAATACA	NA	False	NA	NA	False	NA	NA	NA	47826247	47826071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_47826100_47826200
Isoform_183651_3	chr8	-	173	1	Intergenic	novelGene_10642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATAAAAGGAAGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	48016756	48016583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_48016600_48016800
Isoform_183656_9	chr8	+	227	1	Intergenic	novelGene_10643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTTTAA	5004	False	NA	NA	False	NA	NA	NA	48141153	48141380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_48141200_48141400
Isoform_183658_3	chr8	-	3705	1	FSM	ENSMUSG00000038069.7	ENSMUST00000212658.2	842	1	1	-2864	0	-782	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTGTTTTTTTTTC	NA	False	NA	-2	True	ATTAAA	-26	NA	48166966	48163261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48163300_48167000
Isoform_183659_8	chr8	-	176	1	Intergenic	novelGene_10482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAATCACAT	NA	False	NA	NA	False	NA	NA	NA	6942907	6942731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_6942700_6942900
Isoform_18366_7	chr11	-	4307	8	FSM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	35	15	1	1	multi-exon	FALSE	canonical	2	7	junction_4	3.49927106111883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGAGTCTTAATGTCT	6171	False	NA	-22	True	NA	NA	NA	119246327	119234322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119237664_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
Isoform_183660_55	chr8	+	185	1	Intergenic	novelGene_10644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAGAAGCTTT	NA	False	NA	NA	False	AATAAA	-6	NA	48176120	48176305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_48176100_48176300
Isoform_183661_6	chr8	-	157	1	Intergenic	novelGene_10645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48218474	48218317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_48218300_48218500
Isoform_183662_16	chr8	-	187	1	Intergenic	novelGene_10646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAAAGAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	48229304	48229117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_48229100_48229300
Isoform_183664_3	chr8	+	4323	1	Intergenic	novelGene_10647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48409436	48413759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_48409400_48413800
Isoform_183665_5	chr8	+	258	1	Intergenic	novelGene_10648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTCTTTTTTAAACCT	NA	False	NA	NA	False	NA	NA	NA	48429439	48429697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_48429400_48429700
Isoform_183667_9	chr8	-	1494	1	FSM	ENSMUSG00000031563.9	ENSMUST00000212282.2	5592	1	412	3686	39	-3686	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48443547	48442053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_48442100_48443500
Isoform_183669_9	chr8	+	176	1	Intergenic	novelGene_10483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGCAAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	7555225	7555401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_7555200_7555400
Isoform_18367_11	chr11	-	4176	8	FSM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	16	165	-10	-149	multi-exon	FALSE	canonical	2	7	junction_4	3.49927106111883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGCCAGCTGTTGCCC	6152	False	NA	NA	False	NA	NA	NA	119246346	119234472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119237664_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
Isoform_183673_5	chr8	-	3401	1	Intergenic	novelGene_10650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAGAACAAATGACTTAGA	NA	False	NA	NA	False	NA	NA	NA	49296351	49292950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_49293000_49296400
Isoform_183674_6	chr8	+	206	1	Intergenic	novelGene_10484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	8530664	8530870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_8530700_8530900
Isoform_183675_5	chr8	-	165	1	Intergenic	novelGene_10651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATTAACCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50809986	50809821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_50809800_50810000
Isoform_18368_3	chr11	-	7315	3	ISM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	1	2	1	-2	intron_retention	FALSE	canonical	3	67	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTCATTGGATTC	NA	False	NA	NA	False	AGTAAA	-13	NA	119438578	119429546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_119433521_119434007_119434188_119435417
Isoform_183680_4	chr8	+	190	1	Intergenic	novelGene_10653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTAGAGATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	53400878	53401068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_53400900_53401100
Isoform_183681_5	chr8	+	3554	1	Genic_Genomic	ENSMUSG00000031520.7	novel	NA	NA	NA	NA	-461	-88346	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	560	False	NA	NA	False	NA	NA	NA	54530179	54533733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_54530200_54533700
Isoform_183682_6	chr8	+	3495	1	Genic_Genomic	ENSMUSG00000031520.7	novel	NA	NA	NA	NA	-394	-88338	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	627	False	NA	NA	False	NA	NA	NA	54530246	54533741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_54530200_54533700
Isoform_183689_3	chr8	-	177	1	Intergenic	novelGene_10654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	54534842	54534665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_54534700_54534800
Isoform_18369_6	chr11	-	5501	4	ISM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	1	1	1	-1	intron_retention	FALSE	canonical	3	52	junction_3	8.17856276425687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTCATTGGATTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	119438578	119429545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477
Isoform_183690_45	chr8	-	181	1	Intergenic	novelGene_10655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTTGCTAGTG	NA	False	NA	NA	False	NA	NA	NA	54862021	54861840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_54861800_54862000
Isoform_18370_108	chr11	-	5213	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	1	3	1	-3	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGTCTCATTGGATT	NA	False	NA	NA	False	AGTAAA	-12	NA	119438578	119429547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
Isoform_183702_11	chr8	-	2924	1	ISM	ENSMUSG00000054408.10	ENSMUST00000067476.9	3466	5	6636	6	6636	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTCCAGGTTTATGT	NA	False	NA	-10	True	AATAAA	-32	NA	54976397	54973473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_54973500_54976400
Isoform_183705_4	chr8	+	172	1	Intergenic	novelGene_10656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	56366545	56366717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_56366500_56366700
Isoform_183707_3	chr8	+	2033	1	NIC	ENSMUSG00000038206.14	novel	2466	3	NA	NA	0	-11452	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCCTGATTTTG	NA	False	NA	NA	False	NA	NA	NA	57004143	57006176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_57004100_57006200
Isoform_183708_5	chr8	+	236	1	Intergenic	novelGene_10657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTATCCATTCGTTAGT	NA	False	NA	NA	False	NA	NA	NA	57048199	57048435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_57048200_57048400
Isoform_183709_33	chr8	+	172	1	Intergenic	novelGene_10658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	57079835	57080007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_57079800_57080000
Isoform_183712_5	chr8	+	168	1	Intergenic	novelGene_10659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	57916551	57916719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_57916600_57916700
Isoform_183719_3	chr4	-	222	3	Antisense	novelGene_ENSMUSG00000095460.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATCATGAAGTTTGTAA	NA	False	NA	NA	False	AATAAA	-21	NA	146834134	146648538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_146648653_146833966_146834023_146834082
Isoform_183721_45	chr8	-	182	1	Intergenic	novelGene_10660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGTACCTGTATC	NA	False	NA	NA	False	NA	NA	NA	58214023	58213841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_58213800_58214000
Isoform_183722_87	chr8	-	181	1	Intergenic	novelGene_10661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	60971182	60971001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_60971000_60971200
Isoform_183723_37	chr8	+	175	1	Intergenic	novelGene_10662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7160	False	NA	NA	False	NA	NA	NA	61137697	61137872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_61137700_61137900
Isoform_183725_11	chr8	+	220	1	Intergenic	novelGene_10663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGACTAGCATGA	NA	False	NA	NA	False	AATAAA	-19	NA	61356551	61356771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_61356600_61356800
Isoform_183726_9	chr8	+	223	1	Intergenic	novelGene_10485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTTCTTTTAAGTATG	NA	False	NA	NA	False	AAAAAG	-17	NA	8797435	8797658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_8797400_8797700
Isoform_18373_7	chr11	-	5306	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	-94	5	-94	-5	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTGGTCTCATTGGA	NA	False	NA	NA	False	AGTAAA	-10	NA	119438673	119429549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
Isoform_183732_192	chr8	+	179	1	Intergenic	novelGene_10664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAACCGAA	NA	False	NA	NA	False	NA	NA	NA	61530686	61530865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_61530700_61530900
Isoform_183735_52	chr8	+	181	1	Intergenic	novelGene_10665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAATTAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	61879992	61880173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_61880000_61880200
Isoform_183736_8	chr8	-	215	1	Intergenic	novelGene_10486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTGTGTTTGGAGAA	NA	False	NA	NA	False	NA	NA	NA	9573623	9573408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_9573400_9573600
Isoform_183738_4	chr8	+	213	1	Intergenic	novelGene_10667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATTTTATTCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	63097597	63097810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_63097600_63097800
Isoform_183742_63	chr1	-	176	1	Intergenic	novelGene_368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	131367420	131367244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131367200_131367400
Isoform_183743_12	chr8	+	173	1	Intergenic	novelGene_10668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65208484	65208657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_65208500_65208700
Isoform_183744_3	chr8	+	169	1	Intergenic	novelGene_10669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAATATTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	65222011	65222180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_65222000_65222200
Isoform_183746_31	chr8	+	178	1	Intergenic	novelGene_10670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGTGACAAATC	NA	False	NA	NA	False	NA	NA	NA	65484217	65484395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_65484200_65484400
Isoform_183748_3	chr8	-	244	1	Intergenic	novelGene_10671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAACAAAAAAAACCAACAA	NA	False	NA	NA	False	NA	NA	NA	65509371	65509127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_65509100_65509400
Isoform_18375_4	chr11	-	5373	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	-161	5	-161	-5	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTGGTCTCATTGGA	NA	False	NA	NA	False	AGTAAA	-10	NA	119438740	119429549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
Isoform_183752_8	chr8	-	180	1	Intergenic	novelGene_10673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	65526156	65525976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_65526000_65526200
Isoform_183755_14	chr8	+	164	1	Intergenic	novelGene_10675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAAAAAAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	66373264	66373428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_66373300_66373400
Isoform_183757_3	chr8	+	2746	1	Antisense	novelGene_ENSMUSG00000025591.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	66935833	66938579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_66935800_66938600
Isoform_183759_5	chr8	-	398	1	Intergenic	novelGene_10676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-33	NA	67348213	67347815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_67347800_67348200
Isoform_18376_3	chr11	-	5324	6	NNC	ENSMUSG00000025582.5	novel	5217	5	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.8182875848208	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTGGTCTCATTGGA	NA	False	NA	NA	False	AGTAAA	-10	NA	119438578	119429549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_119433521_119434007_119434188_119435417_119435663_119436910_119437024_119437477_119437686_119437971
Isoform_183760_5	chr8	-	176	1	Intergenic	novelGene_10487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	10074473	10074297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_10074300_10074500
Isoform_183762_410	chr8	-	1658	1	FSM	ENSMUSG00000030735.7	ENSMUST00000032981.7	1356	1	-68	-234	-68	234	mono-exon	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6271	False	NA	NA	False	AATAAA	-16	NA	67968310	67966652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_67966700_67968300
Isoform_183767_8	chr8	-	176	1	Intergenic	novelGene_10677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAGGTGCTA	NA	False	NA	NA	False	NA	NA	NA	68260039	68259863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_68259900_68260000
Isoform_183770_20	chr8	+	173	1	Intergenic	novelGene_10678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATTAAA	NA	False	NA	NA	False	NA	NA	NA	68959194	68959367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_68959200_68959400
Isoform_183771_13	chr8	-	171	1	Intergenic	novelGene_10679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATTAAAG	6673	False	NA	NA	False	NA	NA	NA	69013173	69013002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_69013000_69013200
Isoform_183772_13	chr5	+	169	1	Intergenic	novelGene_8438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCCAC	NA	False	NA	NA	False	NA	NA	NA	32973019	32973188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_32973000_32973200
Isoform_183773_343	chr8	-	177	1	Intergenic	novelGene_10680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	69274248	69274071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_69274100_69274200
Isoform_183775_4	chr8	+	172	1	Intergenic	novelGene_10681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69539275	69539447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_69539300_69539400
Isoform_18378_288	chr11	-	3601	26	FSM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	-19	-4	-19	4	multi-exon	FALSE	canonical	0	0	junction_17	26.0287840668749	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACCTGCTTGTCTTTCT	NA	False	NA	-5	True	AGTAAA	-31	NA	119977672	119955251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
Isoform_183783_28	chr8	-	164	1	Intergenic	novelGene_10682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGTAGGTTTGGTA	NA	False	NA	NA	False	NA	NA	NA	69644579	69644415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_69644400_69644600
Isoform_183785_6	chr8	-	4316	1	Intergenic	novelGene_10683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69675857	69671541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_69671500_69675900
Isoform_183787_4	chr8	-	915	1	FSM	ENSMUSG00000110444.3	ENSMUST00000211874.2	928	1	11	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAACAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	69848180	69847265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_69847300_69848200
Isoform_183788_3	chr8	+	181	1	Intergenic	novelGene_10684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	70017889	70018070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70017900_70018100
Isoform_183789_3	chr8	-	3522	1	Intergenic	novelGene_10685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	70061281	70057759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_70057800_70061300
Isoform_183790_3	chr8	-	2199	1	NIC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	25	-4453	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAGTTATA	NA	False	NA	NA	False	NA	NA	NA	70078171	70075972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70076000_70078200
Isoform_183791_75	chr6	-	177	1	Intergenic	novelGene_9517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	9524	False	NA	NA	False	NA	NA	NA	97344655	97344478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_97344500_97344700
Isoform_183794_3	chr8	+	176	1	Intergenic	novelGene_10687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCCAAAACTG	4252	False	NA	NA	False	NA	NA	NA	70307034	70307210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70307000_70307200
Isoform_183795_16	chr8	-	1805	1	Genic_Genomic	ENSMUSG00000044006.9	novel	NA	NA	NA	NA	5516	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTTGTGTCAATTGAAA	NA	False	NA	1	True	ATTAAA	-17	NA	70334821	70333016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_70333000_70334800
Isoform_183801_41	chr8	+	176	1	Intergenic	novelGene_10688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAGAA	7225	False	NA	NA	False	NA	NA	NA	70384039	70384215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70384000_70384200
Isoform_183804_28	chr8	-	158	1	Intergenic	novelGene_10689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGTGTCTAAGTG	6440	False	NA	NA	False	NA	NA	NA	70433144	70432986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_70433000_70433100
Isoform_183805_3	chr8	+	2879	1	Intergenic	novelGene_10690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5004	False	NA	NA	False	NA	NA	NA	70444795	70447674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70444800_70447700
Isoform_183808_33	chr8	+	164	1	Intergenic	novelGene_10691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATTTAAAGAAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	70460477	70460641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70460500_70460600
Isoform_183810_31	chr8	-	189	1	Intergenic	novelGene_10692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAGGGAAAAAAA	381	False	NA	NA	False	NA	NA	NA	70488135	70487946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_70487900_70488100
Isoform_183811_3	chr8	+	201	1	Intergenic	novelGene_10693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTTAAACAAATATGT	NA	False	NA	NA	False	NA	NA	NA	70491537	70491738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70491500_70491700
Isoform_183814_10	chr19	-	178	1	Intergenic	novelGene_5716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGTAACA	7293	False	NA	NA	False	NA	NA	NA	24511448	24511270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_24511300_24511400
Isoform_183815_56	chr2	-	174	1	Intergenic	novelGene_6573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3549	False	NA	NA	False	NA	NA	NA	130664186	130664012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_130664000_130664200
Isoform_183818_5	chr8	+	860	1	NIC	ENSMUSG00000071078.7	novel	1078	4	NA	NA	2	-1545	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCACACGCCTTTAATC	449	False	NA	NA	False	NA	NA	NA	70583984	70584844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70584000_70584800
Isoform_183819_4	chr8	+	1846	1	NIC	ENSMUSG00000002345.19	novel	810	6	NA	NA	-4	-3987	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	8817	False	NA	NA	False	NA	NA	NA	70592352	70594198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_70592400_70594200
Isoform_183820_33	chr8	+	178	1	Intergenic	novelGene_10489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGATATCAT	NA	False	NA	NA	False	NA	NA	NA	11531297	11531475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_11531300_11531500
Isoform_183822_11	chr8	+	2151	1	Intergenic	novelGene_10694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGTAAAATA	600	False	NA	NA	False	NA	NA	NA	70611308	70613459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70611300_70613500
Isoform_183824_8	chr8	-	164	1	Intergenic	novelGene_10695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTAAAGGAGGATGTT	1381	False	NA	NA	False	NA	NA	NA	70617410	70617246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_70617200_70617400
Isoform_183825_745	chr8	+	177	1	Intergenic	novelGene_10696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTAGTTATTTTATGAAT	NA	False	NA	23	True	NA	NA	NA	70632072	70632249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70632100_70632200
Isoform_183826_29	chr8	+	172	1	Intergenic	novelGene_10697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATTAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	70632523	70632695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70632500_70632700
Isoform_183827_4	chr8	+	176	1	Intergenic	novelGene_10490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGTAG	NA	False	NA	NA	False	NA	NA	NA	11538452	11538628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_11538500_11538600
Isoform_183829_6	chr8	-	158	1	Intergenic	novelGene_10698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	70679783	70679625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_70679600_70679800
Isoform_183830_3	chr8	+	194	1	Intergenic	novelGene_10699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGATAAAAGAAAAAGGCCA	8011	False	NA	NA	False	NA	NA	NA	70684214	70684408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70684200_70684400
Isoform_183838_6	chr8	+	1184	1	Antisense	novelGene_ENSMUSG00000058301.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTCTTTTGTCTTGC	NA	False	NA	NA	False	NA	NA	NA	70805249	70806433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_70805200_70806400
Isoform_183839_3	chr8	+	2225	1	Antisense	novelGene_ENSMUSG00000058301.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAGTACATTTATTTAG	NA	False	NA	NA	False	AATAAA	-30	NA	70805249	70807474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_70805200_70807500
Isoform_183840_49	chr8	-	179	1	Intergenic	novelGene_10700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGATGACAATCC	NA	False	NA	NA	False	NA	NA	NA	70821376	70821197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_70821200_70821400
Isoform_183841_7	chr8	+	639	1	FSM	ENSMUSG00000031505.12	ENSMUST00000209932.2	664	1	4	21	-2	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	11547590	11548229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_11547600_11548200
Isoform_183842_35	chr8	-	1974	1	NIC	ENSMUSG00000055707.14	novel	2919	3	NA	NA	-20	-24272	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAGAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	70929575	70927601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_70927600_70929600
Isoform_183844_5	chr8	-	169	1	Intergenic	novelGene_10701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGCGTGATGG	NA	False	NA	NA	False	NA	NA	NA	70960165	70959996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_70960000_70960200
Isoform_183850_8	chr8	+	501	1	Antisense	novelGene_ENSMUSG00000090137.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	70963129	70963630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_70963100_70963600
Isoform_183853_30	chr8	+	161	1	Intergenic	novelGene_10702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGTGATGCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70969812	70969973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_70969800_70970000
Isoform_183856_18	chr18	+	177	1	Intergenic	novelGene_5559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	84810607	84810784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_84810600_84810800
Isoform_183857_10	chr8	-	170	1	Intergenic	novelGene_10704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	71069149	71068979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71069000_71069100
Isoform_183859_14	chr8	-	186	1	Intergenic	novelGene_10705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACTTTATAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	71072984	71072798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71072800_71073000
Isoform_18386_73	chr11	-	2750	13	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	21.0797098335501	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119989521	119981356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987390_119987501_119987703_119987796_119988334_119988408_119989451
Isoform_183860_14	chr8	-	178	1	Intergenic	novelGene_10706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATCCTA	5517	False	NA	NA	False	NA	NA	NA	71080243	71080065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71080100_71080200
Isoform_183862_14	chr8	+	176	1	Intergenic	novelGene_10707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	71088689	71088865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_71088700_71088900
Isoform_183863_7	chr8	+	152	1	Intergenic	novelGene_10708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	71093904	71094056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_71093900_71094100
Isoform_183865_37	chr8	-	178	1	Intergenic	novelGene_10709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAACCAACAA	NA	False	NA	NA	False	NA	NA	NA	71120620	71120442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71120400_71120600
Isoform_183866_5	chr8	-	176	1	Intergenic	novelGene_10710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGGAGTG	NA	False	NA	NA	False	NA	NA	NA	71122190	71122014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71122000_71122200
Isoform_18387_239	chr11	-	2734	13	FSM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	38	-2	7	2	multi-exon	FALSE	canonical	3	76	junction_11	8.42944574426786	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACTTGGGCTGGTTG	NA	False	NA	-6	True	AATAAA	-18	NA	119989519	119981354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
Isoform_183870_2507	chr8	+	1677	1	FSM	ENSMUSG00000071076.9	ENSMUST00000095267.8	1667	1	-10	0	-10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2507	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTGTCCGCCTCCTT	NA	False	NA	34	True	AGTAAA	-16	NA	71151588	71153265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71151600_71153300
Isoform_183881_3	chr8	-	172	1	Intergenic	novelGene_10711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTTGCTTTCCAAAA	NA	False	NA	NA	False	NA	NA	NA	71188684	71188512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71188500_71188700
Isoform_183884_9	chr8	-	3461	2	NNC	ENSMUSG00000031834.16	novel	626	3	NA	NA	0	-857	intron_retention	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAGATACTCCAGT	NA	False	NA	NA	False	NA	NA	NA	71229357	71225874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_71226097_71226118
Isoform_183885_64	chr8	+	817	1	FSM	ENSMUSG00000100691.2	ENSMUST00000191396.2	1009	1	-47	239	-47	-239	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTTGGATTTTTCCTTT	2278	False	NA	20	True	ATTAAA	-21	NA	71229411	71230228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_71229400_71230200
Isoform_183887_3	chr8	-	1666	1	NIC	ENSMUSG00000031833.11	novel	530	6	NA	NA	-4	-13471	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATGAAAAAGAAAAAT	NA	False	NA	NA	False	AATACA	-7	NA	71257633	71255967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_71256000_71257600
Isoform_183889_18	chr8	-	174	1	Intergenic	novelGene_10712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	71280162	71279988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71280000_71280200
Isoform_183893_13	chr8	-	169	1	Intergenic	novelGene_10713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAGTTTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71293355	71293186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71293200_71293400
Isoform_1839_23	chr10	-	1183	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	-82	2	22	-2	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGGCTGGATCTTTTAT	NA	False	NA	-6	True	ATTAAA	-14	NA	31321932	31208374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_18390_5	chr11	-	2654	12	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	18	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	26.0352589912949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCACTTGGGCTGGTT	NA	False	NA	-7	True	AATAAA	-17	NA	119989508	119981355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119987406_119987501_119987703_119987796_119988334_119988408_119989451
Isoform_183901_3	chr8	+	178	1	Intergenic	novelGene_10714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	3616	False	NA	NA	False	NA	NA	NA	71334343	71334521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_71334300_71334500
Isoform_183905_17	chr8	+	173	1	Intergenic	novelGene_10715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	3189	False	NA	NA	False	NA	NA	NA	71375017	71375190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_71375000_71375200
Isoform_183906_3	chr8	-	175	1	Intergenic	novelGene_10716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAGAATA	5166	False	NA	NA	False	NA	NA	NA	71698367	71698192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71698200_71698400
Isoform_183907_3	chr8	+	178	1	Intergenic	novelGene_10717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTGAG	4760	False	NA	NA	False	NA	NA	NA	71785356	71785534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_71785400_71785500
Isoform_183908_4	chr8	+	167	1	Intergenic	novelGene_10718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	71816786	71816953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_71816800_71817000
Isoform_18391_5	chr11	-	2816	12	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	18	2	intron_retention	FALSE	canonical	3	76	junction_10	8.80176541269791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACTTGGGCTGGTTG	NA	False	NA	-6	True	AATAAA	-18	NA	119989508	119981354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119982839_119983676_119983812_119984070_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
Isoform_183922_27	chr12	-	178	1	Intergenic	novelGene_2611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71092716	71092538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_71092500_71092700
Isoform_183923_5	chr8	+	1546	1	NIC	ENSMUSG00000031813.9	novel	392	4	NA	NA	-1	-34	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71995585	71997131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_71995600_71997100
Isoform_183925_32	chr8	+	2300	1	Genic_Genomic	ENSMUSG00000031807.11	novel	NA	NA	NA	NA	-6	-642	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	72044813	72047113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_72044800_72047100
Isoform_183934_4	chr8	-	2538	1	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	7	-8846	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	72124373	72121835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_72121800_72124400
Isoform_183937_5	chr8	-	179	1	Intergenic	novelGene_10720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	4056	False	NA	NA	False	NA	NA	NA	72158898	72158719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_72158700_72158900
Isoform_183953_6	chr8	+	849	1	Intergenic	novelGene_10491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	11694665	11695514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_11694700_11695500
Isoform_183955_10	chr8	-	177	1	Intergenic	novelGene_10721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAATTAACAACA	NA	False	NA	NA	False	NA	NA	NA	72893159	72892982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_72893000_72893200
Isoform_183956_3	chr8	-	157	1	Intergenic	novelGene_10722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATATATATATTCTGGA	NA	False	NA	NA	False	NA	NA	NA	72902737	72902580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_72902600_72902700
Isoform_183960_4	chr8	-	1655	1	NIC	ENSMUSG00000087502.2	novel	963	2	NA	NA	3	-11597	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATGAG	NA	False	NA	NA	False	NA	NA	NA	72914696	72913041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_72913000_72914700
Isoform_183964_6	chr7	-	3516	9	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	12	74727	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.241831418908	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	42155137	42048082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr7_-_42048405_42048513_42048565_42123692_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
Isoform_183966_583	chr8	+	179	1	Intergenic	novelGene_10723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	583	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAATAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	73031871	73032050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_73031900_73032000
Isoform_183968_193	chr8	+	176	1	Intergenic	novelGene_10724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	73052048	73052224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_73052000_73052200
Isoform_183970_414	chr8	-	467	1	FSM	ENSMUSG00000070713.6	ENSMUST00000075602.8	1151	1	-18	702	-18	-702	mono-exon	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTAAGCTA	NA	False	NA	NA	False	TATAAA	-20	NA	73059122	73058655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_73058700_73059100
Isoform_183979_10	chr8	-	201	1	Intergenic	novelGene_10725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTTTTGTTTTTAAAG	NA	False	NA	NA	False	AATAGA	-7	NA	73090979	73090778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_73090800_73091000
Isoform_183980_17	chr8	-	180	1	Intergenic	novelGene_10492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGGTGTGGTGGCGCA	4821	False	NA	NA	False	NA	NA	NA	11753435	11753255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_11753300_11753400
Isoform_183981_4	chr8	+	3329	1	Intergenic	novelGene_10726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-38	NA	73101520	73104849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_73101500_73104800
Isoform_183982_48	chr8	-	177	1	Intergenic	novelGene_10727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	73176467	73176290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_73176300_73176500
Isoform_183984_34	chr8	-	176	1	Intergenic	novelGene_10728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9392	False	NA	NA	False	NA	NA	NA	73198320	73198144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_73198100_73198300
Isoform_183986_48	chr8	+	177	1	Intergenic	novelGene_10729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	73226202	73226379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_73226200_73226400
Isoform_183990_7	chr8	+	3943	1	Antisense	novelGene_ENSMUSG00000019731.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCTGGCAGGAGCAAG	NA	False	NA	NA	False	NA	NA	NA	73235479	73239422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_73235500_73239400
Isoform_183999_3	chr8	+	1205	1	Intergenic	novelGene_10730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACAAGGTCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	73302385	73303590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_73302400_73303600
Isoform_1840_5	chr10	-	2719	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	-403	8697	-403	-8697	multi-exon	FALSE	canonical	3	16	junction_4	4.8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTGTTTCCATGGTAA	NA	False	NA	NA	False	ATTAAA	-14	NA	31485583	31377885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
Isoform_184000_10	chr8	+	200	1	Intergenic	novelGene_10731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGCTGGCTGACCTGA	NA	False	NA	NA	False	NA	NA	NA	73304737	73304937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_73304700_73304900
Isoform_184005_77	chr8	+	174	1	Intergenic	novelGene_10732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAAGGTGGGCT	NA	False	NA	NA	False	NA	NA	NA	73410548	73410722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_73410500_73410700
Isoform_184006_15	chr8	+	176	1	Intergenic	novelGene_10733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGGAAAATA	NA	False	NA	NA	False	NA	NA	NA	73678660	73678836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_73678700_73678800
Isoform_184007_7	chr8	+	4014	1	Intergenic	novelGene_10734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTTGAAGCAAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	73720990	73725004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_73721000_73725000
Isoform_184008_10	chr8	-	2355	1	NIC	ENSMUSG00000004383.19	novel	4647	15	NA	NA	23	-306099	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74080145	74077790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_74077800_74080100
Isoform_184009_4	chr8	-	2422	1	Genic_Genomic	ENSMUSG00000004383.19	novel	NA	NA	NA	NA	-48	-306103	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74080216	74077794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_74077800_74080200
Isoform_184010_21	chr13	+	177	1	Intergenic	novelGene_2971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32994187	32994364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_32994200_32994400
Isoform_184012_3	chr8	-	154	1	Intergenic	novelGene_10493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	11842287	11842133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_11842100_11842300
Isoform_184014_15	chr8	-	174	1	Intergenic	novelGene_10736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAACAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75660459	75660285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_75660300_75660500
Isoform_184015_30	chr8	+	168	1	Intergenic	novelGene_10737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGAAAATAGTATGTG	NA	False	NA	NA	False	NA	NA	NA	75701074	75701242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_75701100_75701200
Isoform_184016_3	chr8	-	169	1	Intergenic	novelGene_10738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATTGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75714040	75713871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_75713900_75714000
Isoform_184019_8	chr8	+	176	1	Intergenic	novelGene_10739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	75747647	75747823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_75747600_75747800
Isoform_184021_10	chr8	+	177	1	Intergenic	novelGene_10740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAAGCCGGGCGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	75800091	75800268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_75800100_75800300
Isoform_18403_375	chr11	-	4026	16	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	189	junction_1	103.515409480908	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5030	False	NA	-11	True	AATAAA	-13	NA	120042138	119995276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_18404_95	chr11	-	4066	16	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-2	5	combination_of_known_junctions	FALSE	canonical	3	189	junction_1	103.515409480908	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	4994	False	NA	-7	True	AATAAA	-17	NA	120042174	119995272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_184041_3	chr8	-	3432	1	NIC	ENSMUSG00000037148.9	novel	3084	23	NA	NA	25	-263578	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAAAAATAAAATG	NA	False	NA	NA	False	NA	NA	NA	78244557	78241125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_78241100_78244600
Isoform_184044_28	chr8	-	7171	1	Intergenic	novelGene_10741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	78873668	78866497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_78866500_78873700
Isoform_184046_8	chr8	+	157	1	Intergenic	novelGene_10742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAAAACTAT	NA	False	NA	NA	False	NA	NA	NA	79136234	79136391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_79136200_79136400
Isoform_184047_45	chr8	+	176	1	Intergenic	novelGene_10743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACTG	NA	False	NA	NA	False	NA	NA	NA	79142941	79143117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_79142900_79143100
Isoform_184048_3	chr8	+	175	1	Intergenic	novelGene_10744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGAGAGAGAGAGAAGC	NA	False	NA	NA	False	NA	NA	NA	79194898	79195073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_79194900_79195100
Isoform_184050_6	chr8	+	178	1	Intergenic	novelGene_10745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTATATCTTATCTATA	NA	False	NA	NA	False	NA	NA	NA	79217816	79217994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_79217800_79218000
Isoform_184051_30	chr8	-	3589	1	NIC	ENSMUSG00000037070.11	novel	1695	2	NA	NA	20	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTGTCTTGATTTCT	NA	False	NA	NA	False	AGTAAA	-16	NA	79235488	79231899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_79231900_79235500
Isoform_184052_18	chr8	-	3621	1	NIC	ENSMUSG00000037070.11	novel	1695	2	NA	NA	8	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTCTTGATTTCTC	NA	False	NA	NA	False	AGTAAA	-17	NA	79235519	79231898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_79231900_79235500
Isoform_184061_5	chr8	-	177	1	Intergenic	novelGene_10746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTGGG	NA	False	NA	NA	False	NA	NA	NA	79249236	79249059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_79249100_79249200
Isoform_184063_14	chr8	-	5673	1	Intergenic	novelGene_10747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGATCCTGCA	6340	False	NA	NA	False	AGTAAA	-44	NA	79288604	79282931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_79282900_79288600
Isoform_184064_10	chr8	-	160	1	Intergenic	novelGene_10494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGATCATAAACTT	NA	False	NA	NA	False	NA	NA	NA	12156590	12156430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_12156400_12156600
Isoform_184069_6	chr8	+	353	1	Genic_Genomic	ENSMUSG00000071064.16	novel	NA	NA	NA	NA	-351	-43399	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	4695	False	NA	NA	False	NA	NA	NA	79754714	79755067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_79754700_79755100
Isoform_184072_398	chr8	-	172	1	Intergenic	novelGene_10748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79940754	79940582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_79940600_79940800
Isoform_184074_227	chr2	+	175	1	Intergenic	novelGene_6593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142955563	142955738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_142955600_142955700
Isoform_184075_18	chr8	+	286	1	Intergenic	novelGene_10749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTACCTATAAATATG	NA	False	NA	NA	False	AATGAA	-5	NA	80334432	80334718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_80334400_80334700
Isoform_184077_21	chr8	+	177	1	Intergenic	novelGene_10750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	80363708	80363885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_80363700_80363900
Isoform_18409_71	chr11	-	3908	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	39	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	156.31776897704	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5102	False	NA	-11	True	AATAAA	-13	NA	120042066	119995276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
Isoform_1841_3	chr10	-	2747	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	-539	8805	-539	-8805	multi-exon	FALSE	canonical	3	16	junction_4	4.8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGCTTGCCTATTTCC	NA	False	NA	NA	False	ATTAAA	-14	NA	31485719	31377993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
Isoform_184100_4	chr8	+	164	1	Intergenic	novelGene_10751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	80426841	80427005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_80426800_80427000
Isoform_184101_34	chr8	-	2507	1	Genic_Genomic	ENSMUSG00000110202.2	novel	NA	NA	NA	NA	-111	-2751	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80479153	80476646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_80476600_80479200
Isoform_184102_45	chr11	+	175	1	Intergenic	novelGene_1327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	5027571	5027746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5027600_5027700
Isoform_184103_4	chr8	+	2649	1	FSM	ENSMUSG00000096014.2	ENSMUST00000180353.2	4832	1	1219	964	1219	-964	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATACTGTAGCAAATATG	7144	False	NA	NA	False	ATTAAA	-15	NA	12446513	12449162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_12446500_12449200
Isoform_184104_9	chr8	+	173	1	Intergenic	novelGene_10753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	81169104	81169277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_81169100_81169300
Isoform_184105_117	chr8	+	171	1	Intergenic	novelGene_10495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	12469571	12469742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_12469600_12469700
Isoform_184117_7	chr8	+	428	1	Intergenic	novelGene_10754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81586030	81586458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_81586000_81586500
Isoform_184118_3	chr8	+	301	1	Intergenic	novelGene_10755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	81620851	81621152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_81620900_81621200
Isoform_184120_23	chr8	+	168	1	Intergenic	novelGene_10756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGATAG	NA	False	NA	NA	False	NA	NA	NA	81724191	81724359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_81724200_81724400
Isoform_184123_143	chr8	-	174	1	Intergenic	novelGene_10757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAACAAAACAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	83790455	83790281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_83790300_83790500
Isoform_184124_3	chr8	+	1651	1	NIC	ENSMUSG00000031709.16	novel	4631	18	NA	NA	-251	-103691	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	83892237	83893888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_83892200_83893900
Isoform_184125_15	chr8	-	174	1	Intergenic	novelGene_10758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84286764	84286590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_84286600_84286800
Isoform_184134_16	chr8	-	173	1	Intergenic	novelGene_10759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAGAAAGCA	2003	False	NA	NA	False	NA	NA	NA	84585624	84585451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_84585500_84585600
Isoform_184141_4	chr8	+	2429	1	ISM	ENSMUSG00000013033.17	ENSMUST00000141158.8	8181	23	39411	10	1861	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGATAGAGTGGTGTG	1026	False	NA	3	True	AATAAA	-16	NA	84666144	84668573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_84666100_84668600
Isoform_184143_4	chr8	-	321	1	Intergenic	novelGene_10761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTTCA	9476	False	NA	NA	False	NA	NA	NA	84712327	84712006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_84712000_84712300
Isoform_184146_5	chr8	-	952	1	Antisense	novelGene_ENSMUSG00000005469.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACCGGAAAAAAAATAGA	4573	False	NA	NA	False	NA	NA	NA	84723065	84722113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_84722100_84723100
Isoform_184148_3	chr8	-	166	1	Intergenic	novelGene_10762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATCTTAAAAAAA	5664	False	NA	NA	False	NA	NA	NA	84740656	84740490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_84740500_84740700
Isoform_184151_45	chr8	-	182	1	Intergenic	novelGene_10763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTGAGC	9582	False	NA	NA	False	NA	NA	NA	84785737	84785555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_84785600_84785700
Isoform_184161_11	chr8	-	1636	1	Antisense	novelGene_ENSMUSG00000031706.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTTGGTGCTTCTTCTC	4135	False	NA	NA	False	ATTAAA	-18	NA	84811494	84809858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_84809900_84811500
Isoform_184162_32	chr8	-	176	1	Intergenic	novelGene_10764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGTAATATGCC	9302	False	NA	NA	False	NA	NA	NA	84846372	84846196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_84846200_84846400
Isoform_184164_35	chr8	+	180	1	Intergenic	novelGene_10496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAGAGCAAA	NA	False	NA	NA	False	NA	NA	NA	12725277	12725457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_12725300_12725500
Isoform_184166_36	chr8	-	187	1	Intergenic	novelGene_10765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATCAGGGTCTTCA	4078	False	NA	NA	False	NA	NA	NA	84933307	84933120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_84933100_84933300
Isoform_184168_10	chr8	-	189	1	Intergenic	novelGene_10766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTGGGAGGCTAGGTG	8602	False	NA	NA	False	NA	NA	NA	84970114	84969925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_84969900_84970100
Isoform_184169_11	chr8	-	1963	1	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-1	-4225	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	84996997	84995034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_84995000_84997000
Isoform_184172_7	chr8	-	176	1	Intergenic	novelGene_10767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTTAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	85090190	85090014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_85090000_85090200
Isoform_184174_25	chr8	-	170	1	Intergenic	novelGene_10768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	85352568	85352398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_85352400_85352600
Isoform_184175_316	chr8	+	179	1	Intergenic	novelGene_10769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATATGGTTATAA	NA	False	NA	NA	False	NA	NA	NA	85371010	85371189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85371000_85371200
Isoform_184176_37	chr8	+	160	1	Intergenic	novelGene_10770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCTGATGGCTCAATG	NA	False	NA	NA	False	NA	NA	NA	85376007	85376167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85376000_85376200
Isoform_184177_11	chr8	+	174	1	Intergenic	novelGene_10771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	85378462	85378636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85378500_85378600
Isoform_184179_3	chr8	+	2541	1	Intergenic	novelGene_10772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTGCCACAAGAAAAACA	NA	False	NA	NA	False	NA	NA	NA	85382564	85385105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85382600_85385100
Isoform_184182_4523	chr8	-	1516	1	FSM	ENSMUSG00000053560.6	ENSMUST00000060427.6	1524	1	2	6	2	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4523	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCGCGGCTTGTCTGGC	NA	False	NA	-7	True	AATAAA	-14	NA	85389481	85387965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85388000_85389500
Isoform_184192_8	chr8	+	1391	1	Antisense	novelGene_ENSMUSG00000053560.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCAGCAAGCCGGAGCC	NA	False	NA	NA	False	NA	NA	NA	85388090	85389481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_85388100_85389500
Isoform_184219_61	chr8	-	207	1	Intergenic	novelGene_10773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTTTTTTTTTAAA	3218	False	NA	NA	False	NA	NA	NA	85556219	85556012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_85556000_85556200
Isoform_184220_4	chr8	-	883	1	NIC	ENSMUSG00000053226.8	novel	1369	2	NA	NA	183	-15939	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTAGGCTTATGTTA	582	False	NA	NA	False	ATTAAA	-12	NA	85558855	85557972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_85558000_85558900
Isoform_184221_10	chr8	+	3191	1	NIC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	760	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTTATATATATATATAT	3434	False	NA	NA	False	NA	NA	NA	85558910	85562101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85558900_85562100
Isoform_184222_15	chr8	+	2192	1	NIC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	760	-1009	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTCCCTCAAGTTGTGA	3434	False	NA	34	True	AATAAA	-29	NA	85558910	85561102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85558900_85561100
Isoform_184233_13	chr8	-	177	1	Intergenic	novelGene_10774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGTGGTGGTGGCACAC	NA	False	NA	NA	False	NA	NA	NA	85585935	85585758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_85585800_85585900
Isoform_184234_10	chr8	+	206	1	Intergenic	novelGene_10775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGAGGGGAGAGGCAG	3323	False	NA	NA	False	NA	NA	NA	85605392	85605598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85605400_85605600
Isoform_184236_360	chr8	+	178	1	Intergenic	novelGene_10776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACACTGA	NA	False	NA	NA	False	NA	NA	NA	85616780	85616958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85616800_85617000
Isoform_184239_12	chr8	+	171	1	Intergenic	novelGene_10777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	85630689	85630860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85630700_85630900
Isoform_184245_5	chr8	-	2398	2	NNC	ENSMUSG00000111184.2	novel	339	2	NA	NA	-143	544	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAAACAACCCCCCC	4718	False	NA	NA	False	NA	NA	NA	85696205	85693762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_85695012_85695056
Isoform_184246_4	chr8	-	2587	2	NNC	ENSMUSG00000111184.2	novel	339	2	NA	NA	-333	543	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAACAACCCCCC	4528	False	NA	NA	False	NA	NA	NA	85696395	85693763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr8_-_85695012_85695056
Isoform_184249_340	chr8	-	1805	1	FSM	ENSMUSG00000052837.8	ENSMUST00000064922.7	1809	1	1	3	1	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTGTGGTCTCTTTT	NA	False	NA	-4	True	AGTAAA	-18	NA	85705346	85703541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85703500_85705300
Isoform_184253_7	chr8	-	1856	1	FSM	ENSMUSG00000052837.8	ENSMUST00000064922.7	1809	1	-60	13	-60	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTATTAATTTCTGT	NA	False	NA	-14	True	AGTAAA	-8	NA	85705407	85703551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_85703600_85705400
Isoform_184255_15	chr8	-	2081	1	Antisense	novelGene_ENSMUSG00000052566.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	85717528	85715447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_85715400_85717500
Isoform_184257_5	chr8	-	1102	1	NIC	ENSMUSG00000038542.15	novel	2678	11	NA	NA	8393	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATTTGTGTTTTGTCC	NA	False	NA	-6	True	AATAAA	-17	NA	13128290	13127188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_13127200_13128300
Isoform_184258_117	chr8	+	176	1	Intergenic	novelGene_10779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTTAATCCCAA	281	False	NA	NA	False	NA	NA	NA	85731100	85731276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85731100_85731300
Isoform_184260_16	chr8	+	3414	1	NIC	ENSMUSG00000041203.10	novel	902	3	NA	NA	50	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753501	85756915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_85753500_85756900
Isoform_184270_8	chr8	-	616	1	Antisense	novelGene_ENSMUSG00000060038.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	85798742	85798126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_85798100_85798700
Isoform_184272_3	chr8	+	471	1	Intergenic	novelGene_10497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGTATATATAATTAAATA	1032	False	NA	NA	False	NA	NA	NA	13139696	13140167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_13139700_13140200
Isoform_184274_11	chr8	+	158	1	Intergenic	novelGene_10780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATTAATTAATT	NA	False	NA	NA	False	NA	NA	NA	85834403	85834561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85834400_85834600
Isoform_184278_3	chr8	+	182	1	Intergenic	novelGene_10782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAGAGAAAC	NA	False	NA	NA	False	NA	NA	NA	85875474	85875656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85875500_85875700
Isoform_184284_16	chr8	-	171	1	Intergenic	novelGene_10783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTAATGTGCT	NA	False	NA	NA	False	NA	NA	NA	86050373	86050202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_86050200_86050400
Isoform_184285_11	chr8	+	174	1	Intergenic	novelGene_10784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGAGGGCC	NA	False	NA	NA	False	NA	NA	NA	86111759	86111933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_86111800_86111900
Isoform_184286_9	chr8	+	180	1	Intergenic	novelGene_10785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATTAATTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	86149086	86149266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_86149100_86149300
Isoform_184287_6	chr8	+	184	1	Intergenic	novelGene_10786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAGAAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	86171566	86171750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_86171600_86171800
Isoform_184288_32	chr8	+	173	1	Intergenic	novelGene_10787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	86179603	86179776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_86179600_86179800
Isoform_18429_24	chr11	-	4002	16	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	49	junction_12	136.396383138752	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5020	False	NA	-11	True	AATAAA	-13	NA	120042148	119995276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_184290_165	chr8	+	158	1	Intergenic	novelGene_10788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	-19	True	NA	NA	NA	86198383	86198541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_86198400_86198500
Isoform_184292_5	chr8	-	180	1	Intergenic	novelGene_10790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGAAAAGGGGAC	NA	False	NA	NA	False	NA	NA	NA	86213282	86213102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_86213100_86213300
Isoform_184306_11	chr8	-	4151	2	Antisense	novelGene_ENSMUSG00000036879.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAATAAAAA	4414	False	NA	NA	False	NA	NA	NA	86760254	86756063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_86757807_86757846
Isoform_184307_75	chr8	+	181	1	Intergenic	novelGene_10781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85839211	85839392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_85839200_85839400
Isoform_184308_11	chr8	+	156	1	Intergenic	novelGene_10791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATATATGTGAAA	NA	False	NA	NA	False	NA	NA	NA	87271745	87271901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_87271700_87271900
Isoform_184316_21	chr8	+	173	1	Intergenic	novelGene_10793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	87500982	87501155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_87501000_87501200
Isoform_184327_21	chr8	-	4866	1	Genic_Genomic	ENSMUSG00000031652.12	novel	NA	NA	NA	NA	-9	-36083	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGGAACAAGAGATT	NA	False	NA	NA	False	NA	NA	NA	87611895	87607029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_87607000_87611900
Isoform_184329_21	chr8	+	180	1	Intergenic	novelGene_10794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCTCTGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	87646105	87646285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_87646100_87646300
Isoform_18433_785	chr11	-	4028	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	35	491	1	1	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5031	False	NA	-11	True	AATAAA	-13	NA	120042137	119995276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_184331_3925	chr8	+	521	1	FSM	ENSMUSG00000066362.6	ENSMUST00000183478.2	538	1	5	12	5	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3925	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCT	NA	False	NA	25	True	AATAAA	-14	NA	87774321	87774842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_87774300_87774800
Isoform_18434_95	chr11	-	4064	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	-2	492	-2	0	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4994	False	NA	-12	True	AATAAA	-12	NA	120042174	119995277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_184342_3	chr8	+	181	1	Intergenic	novelGene_10795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAATAAAACTG	2045	False	NA	NA	False	NA	NA	NA	88285268	88285449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_88285300_88285400
Isoform_184345_9	chr8	-	182	1	Intergenic	novelGene_10796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATACAAGTTGC	NA	False	NA	NA	False	NA	NA	NA	88732038	88731856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_88731900_88732000
Isoform_184346_43	chr8	+	177	1	Intergenic	novelGene_10797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTCA	4327	False	NA	NA	False	NA	NA	NA	88810851	88811028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_88810900_88811000
Isoform_184348_5	chr8	-	2523	1	Intergenic	novelGene_10498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	AATAAA	-13	NA	13233011	13230488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_13230500_13233000
Isoform_18435_23	chr11	-	4535	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	35	-16	1	16	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGTTTCCTTTACCTA	5031	False	NA	NA	False	ATTAAA	-21	NA	120042137	119994769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_184350_23	chr8	-	174	1	Intergenic	novelGene_10798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88881271	88881097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_88881100_88881300
Isoform_184355_9	chr8	+	173	1	Intergenic	novelGene_10799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	88918710	88918883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_88918700_88918900
Isoform_184356_8	chr8	+	1051	1	FSM	ENSMUSG00000099338.2	ENSMUST00000190461.2	1039	1	-14	2	10	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTGGTGCCTCCATCT	NA	False	NA	NA	False	NA	NA	NA	13250737	13251788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_13250700_13251800
Isoform_184358_4	chr8	+	174	1	Intergenic	novelGene_10800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTTGAAGCCG	9862	False	NA	NA	False	NA	NA	NA	88961616	88961790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_88961600_88961800
Isoform_184360_107	chr8	-	193	1	Intergenic	novelGene_10801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAAGCACATG	1925	False	NA	NA	False	NA	NA	NA	89013754	89013561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_89013600_89013800
Isoform_184362_6	chr8	+	185	1	Intergenic	novelGene_10499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	13256136	13256321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_13256100_13256300
Isoform_184363_79	chr8	+	177	1	Intergenic	novelGene_10802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATCAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	89661696	89661873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_89661700_89661900
Isoform_184370_18	chr8	-	172	1	Intergenic	novelGene_10500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAACAGAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	13262229	13262057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_13262100_13262200
Isoform_184371_103	chr8	-	170	1	Intergenic	novelGene_10806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATCCCAAATAT	NA	False	NA	NA	False	NA	NA	NA	89806999	89806829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_89806800_89807000
Isoform_184373_12	chr8	-	280	1	Intergenic	novelGene_10501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAATAAAATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	13268621	13268341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_13268300_13268600
Isoform_184374_49	chr8	-	172	1	Intergenic	novelGene_10502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGGAGCAAAGGTCCTGAA	NA	False	NA	-1	True	NA	NA	NA	13268620	13268448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_13268400_13268600
Isoform_184376_425	chr8	-	174	1	Intergenic	novelGene_10807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGTATAATGAA	NA	False	NA	NA	False	NA	NA	NA	91554536	91554362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_91554400_91554500
Isoform_184377_6	chr8	+	159	1	Intergenic	novelGene_10808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	91575075	91575234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_91575100_91575200
Isoform_184378_13	chr8	-	1844	1	FSM	ENSMUSG00000074171.3	ENSMUST00000209493.2	1885	1	42	-1	41	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTTTTCTATGTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	91635002	91633158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_91633200_91635000
Isoform_184380_10	chr8	-	172	1	Intergenic	novelGene_10809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAATCTGAA	NA	False	NA	NA	False	NA	NA	NA	91692179	91692007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_91692000_91692200
Isoform_184382_112	chr1	+	176	1	Intergenic	novelGene_652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181682702	181682878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181682700_181682900
Isoform_184387_4	chr8	+	173	1	Intergenic	novelGene_10810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAAAAAATACTGCTA	NA	False	NA	NA	False	NA	NA	NA	92713086	92713259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_92713100_92713300
Isoform_184390_5	chr8	-	152	1	Intergenic	novelGene_10811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATTGTTCACA	NA	False	NA	NA	False	NA	NA	NA	92880779	92880627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_92880600_92880800
Isoform_184391_4	chr8	-	175	1	Antisense	novelGene_ENSMUSG00000038497.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAACTATAT	NA	False	NA	NA	False	NA	NA	NA	13372190	13372015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_13372000_13372200
Isoform_184395_4	chr8	-	287	1	Intergenic	novelGene_10813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	94160315	94160028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_94160000_94160300
Isoform_184397_21	chr8	+	185	1	Intergenic	novelGene_10814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATCCTACAGCC	NA	False	NA	NA	False	NA	NA	NA	94733224	94733409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_94733200_94733400
Isoform_184399_5	chr8	-	168	1	Intergenic	novelGene_10503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATCTGAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	13403928	13403760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_13403800_13403900
Isoform_1844_42	chr10	-	2146	11	FSM	ENSMUSG00000039531.9	ENSMUST00000218055.2	2180	11	34	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	16.213882940246	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	-1	True	AATAAA	-20	NA	33827221	33795137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
Isoform_18440_53	chr11	-	3910	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	52	junction_14	135.716334571001	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5031	False	NA	-11	True	AATAAA	-13	NA	120042137	119995276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
Isoform_184400_9	chr8	+	4141	1	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-11	1915	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGCAGGGCAG	NA	False	NA	NA	False	NA	NA	NA	94763854	94767995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_94763900_94768000
Isoform_184401_3	chr8	-	3786	1	Intergenic	novelGene_10815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94772143	94768357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_94768400_94772100
Isoform_184412_4	chr8	-	199	1	Intergenic	novelGene_10817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCTGTAGCTAGACT	NA	False	NA	NA	False	NA	NA	NA	94903513	94903314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_94903300_94903500
Isoform_184417_128	chr8	-	177	1	Intergenic	novelGene_10818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAGAA	6225	False	NA	NA	False	NA	NA	NA	94911823	94911646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_94911600_94911800
Isoform_184418_41	chr8	-	164	1	Intergenic	novelGene_10819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAGTAAACAAACAA	5777	False	NA	NA	False	NA	NA	NA	94912271	94912107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_94912100_94912300
Isoform_18442_99	chr11	-	3917	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	39	7	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	135.088576383748	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGAGTTGGTTTACCTG	5102	False	NA	-5	True	AATAAA	-19	NA	120042066	119995270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
Isoform_184422_41	chr8	+	176	1	Intergenic	novelGene_10820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	469	False	NA	NA	False	NA	NA	NA	94924166	94924342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_94924200_94924300
Isoform_184424_4	chr8	+	179	1	Intergenic	novelGene_10821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGCGAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	95205059	95205238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_95205100_95205200
Isoform_184425_10	chr8	+	3164	1	FSM	ENSMUSG00000050079.11	ENSMUST00000212014.2	3181	1	10	7	-2	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8150	False	NA	NA	False	NA	NA	NA	95328603	95331767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_95328600_95331800
Isoform_184426_6	chr8	-	189	1	Antisense	novelGene_ENSMUSG00000050079.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACCAAGACAAAATGCACA	NA	False	NA	NA	False	NA	NA	NA	95379016	95378827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_95378800_95379000
Isoform_184427_64	chr1	-	179	1	Intergenic	novelGene_427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAGAAA	5758	False	NA	NA	False	NA	NA	NA	135628287	135628108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135628100_135628300
Isoform_18443_48	chr11	-	3983	15	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	135.088576383748	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5030	False	NA	-11	True	AATAAA	-13	NA	120042138	119995276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
Isoform_184433_11	chr8	-	175	1	Intergenic	novelGene_10822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	95578334	95578159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_95578200_95578300
Isoform_184437_6	chr8	-	1780	1	FSM	ENSMUSG00000110516.2	ENSMUST00000212448.2	1006	1	-792	18	-792	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	176	False	NA	NA	False	NA	NA	NA	95818096	95816316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_95816300_95818100
Isoform_184438_15	chr8	-	176	1	Intergenic	novelGene_10823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	95938272	95938096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_95938100_95938300
Isoform_184439_4	chr8	+	186	1	Intergenic	novelGene_10504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTTGAATTATGTT	NA	False	NA	NA	False	NA	NA	NA	13737799	13737985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_13737800_13738000
Isoform_184441_6	chr8	-	4279	2	Genic_Genomic	ENSMUSG00000031796.8	novel	4182	3	NA	NA	6	-7663	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96161452	96157140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_96157959_96157991
Isoform_184444_3	chr8	+	160	1	Intergenic	novelGene_10824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	96201343	96201503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_96201300_96201500
Isoform_184447_7	chr8	-	3508	1	FSM	ENSMUSG00000109617.2	ENSMUST00000210184.2	1603	1	-1770	-135	-1770	135	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTACTC	NA	False	NA	NA	False	AGTAAA	-16	NA	13799248	13795740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_13795700_13799200
Isoform_184449_36	chr8	+	228	1	Intergenic	novelGene_10825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96325208	96325436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_96325200_96325400
Isoform_184450_9	chr8	+	3550	1	NIC	ENSMUSG00000031669.11	novel	2519	3	NA	NA	-44	-1174	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96360137	96363687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_96360100_96363700
Isoform_184451_74	chr8	+	176	1	Intergenic	novelGene_10826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96409125	96409301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_96409100_96409300
Isoform_184452_12	chr8	+	201	1	Intergenic	novelGene_10505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTGTCCCAGCCAAG	9823	False	NA	NA	False	NA	NA	NA	13801971	13802172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_13802000_13802200
Isoform_184455_7	chr8	+	3400	1	Antisense	novelGene_ENSMUSG00000036550.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96450170	96453570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_96450200_96453600
Isoform_184457_13	chr8	+	184	1	Intergenic	novelGene_10827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAGTAATAC	NA	False	NA	NA	False	NA	NA	NA	96518110	96518294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_96518100_96518300
Isoform_184458_26	chr8	+	189	1	Intergenic	novelGene_10828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96520679	96520868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_96520700_96520900
Isoform_18446_33	chr11	-	3872	14	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	1	9	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	143.204451023351	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGGTTTACCTGCA	5031	False	NA	-3	True	AATAAA	-21	NA	120042137	119995268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120041805
Isoform_184460_19	chr8	+	174	1	Intergenic	novelGene_10829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGGGGGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	96523695	96523869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_96523700_96523900
Isoform_184461_4	chr8	+	2877	1	FSM	ENSMUSG00000074136.10	ENSMUST00000098472.2	3229	1	-259	611	-30	-611	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-25	NA	96533341	96536218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96533300_96536200
Isoform_184463_6	chr8	-	329	1	Intergenic	novelGene_10830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96539952	96539623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_96539600_96540000
Isoform_184464_3	chr8	-	277	1	Intergenic	novelGene_10831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	96546713	96546436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_96546400_96546700
Isoform_184465_495	chr8	+	599	1	FSM	ENSMUSG00000061104.6	ENSMUST00000074053.6	789	1	10	180	10	-180	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCCATTAAGCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	96551983	96552582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_96552000_96552600
Isoform_184470_6	chr8	-	195	1	ISM	ENSMUSG00000110661.2	ENSMUST00000211921.2	4031	2	2683	2200	2683	-2200	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACATACACACGTCACCC	NA	False	NA	NA	False	TATAAA	-10	NA	96557620	96557425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_96557400_96557600
Isoform_184475_37	chr8	-	169	1	Intergenic	novelGene_10832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAGAAAAAAGAAAGA	NA	False	NA	1	True	NA	NA	NA	96580974	96580805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_96580800_96581000
Isoform_184479_14	chr8	-	2069	1	FSM	ENSMUSG00000031672.9	ENSMUST00000212861.2	2057	1	-9	-3	-9	3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTCC	NA	False	NA	NA	False	NA	NA	NA	96615029	96612960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_96613000_96615000
Isoform_184482_3	chr8	-	174	1	Intergenic	novelGene_10833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAATTGTGATAA	NA	False	NA	NA	False	NA	NA	NA	96642484	96642310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_96642300_96642500
Isoform_184483_170	chr16	+	176	1	Intergenic	novelGene_4370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTCCATTTTTTA	2597	False	NA	NA	False	NA	NA	NA	18350943	18351119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18350900_18351100
Isoform_184486_26	chr8	-	176	1	Intergenic	novelGene_10834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCTAAGCTTACA	NA	False	NA	NA	False	NA	NA	NA	97005855	97005679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_97005700_97005900
Isoform_184491_8	chr8	+	1371	1	FSM	ENSMUSG00000071041.5	ENSMUST00000120826.2	1545	1	-65	239	-65	-239	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAGTGGCCCAAGGA	NA	False	NA	NA	False	NA	NA	NA	100757124	100758495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_100757100_100758500
Isoform_184498_4	chr8	+	1086	1	FSM	ENSMUSG00000071041.5	ENSMUST00000120826.2	1545	1	531	-72	531	72	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTAGTGCTAATGGA	NA	False	NA	NA	False	AATAAA	-36	NA	100757720	100758806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_100757700_100758800
Isoform_1845_9	chr10	-	2081	11	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	23.419863364247	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTGTCTATG	NA	False	NA	0	True	AATAAA	-21	NA	33827227	33795136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827198
Isoform_184505_16	chr11	-	166	1	Intergenic	novelGene_1323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTAAAAAGTCACCCA	NA	False	NA	NA	False	NA	NA	NA	4858583	4858417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_4858400_4858600
Isoform_184507_6	chr8	+	169	1	Intergenic	novelGene_10835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATCTAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	102314077	102314246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_102314100_102314200
Isoform_184517_13	chr8	-	635	1	FSM	ENSMUSG00000063696.8	ENSMUST00000076373.8	954	1	424	-105	424	105	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGCCATTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	103592006	103591371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_103591400_103592000
Isoform_184522_3	chr8	-	511	1	FSM	ENSMUSG00000063696.8	ENSMUST00000076373.8	954	1	-75	518	-75	-518	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCAGTGGCACCATT	NA	False	NA	NA	False	NA	NA	NA	103592505	103591994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_103592000_103592500
Isoform_184524_64	chr8	-	177	1	Intergenic	novelGene_10836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105001895	105001718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_105001700_105001900
Isoform_184527_10	chr8	+	183	1	Intergenic	novelGene_10838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105098861	105099044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_105098900_105099000
Isoform_184528_9	chr8	+	154	1	Intergenic	novelGene_10839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	105103020	105103174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_105103000_105103200
Isoform_184529_25	chr8	-	170	1	Intergenic	novelGene_10840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAGAAAAACTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	105143313	105143143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_105143100_105143300
Isoform_184530_5	chr8	-	188	1	Intergenic	novelGene_10841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATCCTCCTGCCTCTG	NA	False	NA	NA	False	NA	NA	NA	105151417	105151229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_105151200_105151400
Isoform_184531_4	chr8	+	260	1	Intergenic	novelGene_10842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105160217	105160477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_105160200_105160500
Isoform_184534_35	chr8	+	176	1	Intergenic	novelGene_10843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCTAATGTCTTA	8646	False	NA	NA	False	NA	NA	NA	105288014	105288190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_105288000_105288200
Isoform_184539_155	chr8	-	1971	1	Antisense	novelGene_ENSMUSG00000048371.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2332	False	NA	NA	False	NA	NA	NA	105323959	105321988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_105322000_105324000
Isoform_184548_14	chr8	+	2989	1	NIC	ENSMUSG00000047710.9	novel	4013	2	NA	NA	-22	-8969	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13919681	13922670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_13919700_13922700
Isoform_184550_9	chr8	+	212	1	Intergenic	novelGene_10844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACGTGCTTCTGAGCTC	1493	False	NA	NA	False	AATAGA	-10	NA	105862141	105862353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_105862100_105862400
Isoform_184551_4	chr8	-	188	1	Intergenic	novelGene_10845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATATTAGTGGGCTAGA	NA	False	NA	NA	False	NA	NA	NA	105902503	105902315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_105902300_105902500
Isoform_184552_24	chr8	-	166	1	Intergenic	novelGene_10846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGACACA	8545	False	NA	NA	False	NA	NA	NA	105925387	105925221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_105925200_105925400
Isoform_184553_6	chr8	+	171	1	Intergenic	novelGene_10847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAGTAATCAT	NA	False	NA	NA	False	NA	NA	NA	105930148	105930319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_105930100_105930300
Isoform_184557_11	chr8	+	178	1	Intergenic	novelGene_10473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTTATTTTATG	3653	False	NA	NA	False	NA	NA	NA	3540474	3540652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_3540500_3540700
Isoform_184564_4	chr8	-	177	1	Intergenic	novelGene_10848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTT	7556	False	NA	NA	False	NA	NA	NA	105971872	105971695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_105971700_105971900
Isoform_184568_4	chr8	-	2542	1	NIC	ENSMUSG00000041679.10	novel	2000	5	NA	NA	-7	-11377	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	6339	False	NA	NA	False	TTTAAA	-29	NA	106052898	106050356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_106050400_106052900
Isoform_184570_7	chr8	+	180	1	Intergenic	novelGene_10849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTAGTTTTATCC	NA	False	NA	NA	False	NA	NA	NA	106183124	106183304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106183100_106183300
Isoform_184572_5	chr8	+	176	1	Intergenic	novelGene_10850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	9155	False	NA	NA	False	NA	NA	NA	106291408	106291584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106291400_106291600
Isoform_184574_8	chr8	-	191	1	Intergenic	novelGene_10851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTTACGTATATGGG	NA	False	NA	NA	False	NA	NA	NA	106303355	106303164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106303200_106303400
Isoform_184575_4	chr8	+	181	1	Intergenic	novelGene_10852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAAGTTATTCTC	NA	False	NA	NA	False	NA	NA	NA	106303399	106303580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106303400_106303600
Isoform_184577_3	chr8	-	178	1	Intergenic	novelGene_10853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGGAATATATGT	NA	False	NA	NA	False	NA	NA	NA	106354955	106354777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106354800_106355000
Isoform_184578_54	chr8	-	210	1	Intergenic	novelGene_10854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAGAATTCTA	NA	False	NA	NA	False	NA	NA	NA	106376229	106376019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106376000_106376200
Isoform_184580_10	chr8	-	6093	2	Genic_Genomic	ENSMUSG00000080021.6	novel	454	1	NA	NA	-5529	140	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	106392948	106386825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_106388221_106388250
Isoform_184581_29	chr8	+	179	1	Intergenic	novelGene_10855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTTAGAGA	1763	False	NA	NA	False	NA	NA	NA	106401815	106401994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106401800_106402000
Isoform_184587_3	chr8	-	172	1	Intergenic	novelGene_10506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAGAACACA	NA	False	NA	NA	False	NA	NA	NA	13963732	13963560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_13963600_13963700
Isoform_184589_49	chr8	+	172	1	Intergenic	novelGene_10856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTGGATGTACTTT	NA	False	NA	9	True	NA	NA	NA	106486335	106486507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106486300_106486500
Isoform_184591_10	chr8	-	169	1	Intergenic	novelGene_10857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAATAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	106526710	106526541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106526500_106526700
Isoform_184593_10	chr8	+	177	1	Intergenic	novelGene_10858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAATAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	106529193	106529370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106529200_106529400
Isoform_184594_3	chr8	-	179	1	Intergenic	novelGene_10859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTCTGGATTCAACT	NA	False	NA	NA	False	NA	NA	NA	106530663	106530484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106530500_106530700
Isoform_184595_830	chr8	+	182	1	Intergenic	novelGene_10860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	830	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAAGTCAACTG	NA	False	NA	NA	False	NA	NA	NA	106530967	106531149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106531000_106531100
Isoform_184596_71	chr8	-	178	1	Intergenic	novelGene_10861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	106533085	106532907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106532900_106533100
Isoform_184597_8	chr8	+	175	1	Intergenic	novelGene_10862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATGAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	106533798	106533973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106533800_106534000
Isoform_184598_7	chr8	-	250	1	Intergenic	novelGene_10863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAGATCTGAACAATG	NA	False	NA	NA	False	NA	NA	NA	106561574	106561324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106561300_106561600
Isoform_1846_4	chr10	-	4339	10	FSM	ENSMUSG00000039531.9	ENSMUST00000048222.6	2991	10	12	-1360	2	175	multi-exon	FALSE	canonical	3	35	junction_9	17.0301113137297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827206	33800954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
Isoform_184601_9	chr8	+	2074	1	FSM	ENSMUSG00000036442.9	ENSMUST00000040445.9	1819	1	-254	-1	-254	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTCGACTTTTTTT	NA	False	NA	13	True	ATTAAA	-20	NA	106581509	106583583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106581500_106583600
Isoform_184602_801	chr8	+	1817	1	FSM	ENSMUSG00000036442.9	ENSMUST00000040445.9	1819	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	801	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGGTTTCGACTTTTT	NA	False	NA	11	True	ATTAAA	-18	NA	106581764	106583581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_106581800_106583600
Isoform_184605_32	chr8	+	2418	1	NIC	ENSMUSG00000008450.9	novel	948	5	NA	NA	-8	-12495	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106587288	106589706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_106587300_106589700
Isoform_184607_14	chr8	-	178	1	Antisense	novelGene_ENSMUSG00000008450.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACCTCTG	NA	False	NA	NA	False	NA	NA	NA	106597056	106596878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_106596900_106597100
Isoform_184608_59	chr8	+	169	1	Intergenic	novelGene_10864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	106597604	106597773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106597600_106597800
Isoform_184610_8	chr8	-	180	1	Intergenic	novelGene_10865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	106629566	106629386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106629400_106629600
Isoform_184612_11	chr8	-	190	1	Intergenic	novelGene_10867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTTGGCAGGGCA	NA	False	NA	NA	False	NA	NA	NA	106641041	106640851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106640900_106641000
Isoform_184613_6	chr8	-	179	1	Intergenic	novelGene_10507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTTCCCAGGCTA	NA	False	NA	NA	False	NA	NA	NA	13998331	13998152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_13998200_13998300
Isoform_184614_7	chr8	-	244	1	Intergenic	novelGene_10868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCAGCACTGAGGAGG	NA	False	NA	NA	False	AAAAAG	-43	NA	106643089	106642845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106642800_106643100
Isoform_184615_30	chr8	+	207	1	Intergenic	novelGene_10869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAATTTATC	8753	False	NA	NA	False	TATAAA	-6	NA	106645045	106645252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106645000_106645300
Isoform_184616_32	chr8	+	181	1	Intergenic	novelGene_10870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	106681278	106681459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106681300_106681500
Isoform_184618_87	chr8	-	155	1	Intergenic	novelGene_10871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGTACTCTTAACC	NA	False	NA	NA	False	NA	NA	NA	106696192	106696037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106696000_106696200
Isoform_184619_118	chr8	-	175	1	Intergenic	novelGene_10872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106697773	106697598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106697600_106697800
Isoform_184622_311	chr8	-	1812	1	FSM	ENSMUSG00000045538.7	ENSMUST00000058579.7	2262	1	449	1	449	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTATGTCATGATTTCTT	NA	False	NA	-10	True	AATAAA	-16	NA	106738065	106736253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_106736300_106738100
Isoform_184625_30	chr8	+	201	1	Intergenic	novelGene_10873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAGAGCTGGCCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	106739093	106739294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106739100_106739300
Isoform_184626_19	chr8	-	173	1	Intergenic	novelGene_10874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGGTTTTTTGAGAC	NA	False	NA	NA	False	NA	NA	NA	106757695	106757522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106757500_106757700
Isoform_184627_41	chr8	-	175	1	Intergenic	novelGene_10875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTATTTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	106793068	106792893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106792900_106793100
Isoform_184628_10	chr8	+	177	1	Intergenic	novelGene_10508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	2918	False	NA	NA	False	NA	NA	NA	14020336	14020513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_14020300_14020500
Isoform_184629_12	chr8	-	213	1	Antisense	novelGene_ENSMUSG00000031902.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTAAAAAAGCTAAAATG	NA	False	NA	NA	False	NA	NA	NA	106825578	106825365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_106825400_106825600
Isoform_184631_33	chr8	+	181	1	Intergenic	novelGene_10876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTGATGCTTA	NA	False	NA	NA	False	NA	NA	NA	106839434	106839615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106839400_106839600
Isoform_184633_6	chr8	-	2075	1	Intergenic	novelGene_10877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106851822	106849747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106849700_106851800
Isoform_184636_4	chr8	-	235	1	Intergenic	novelGene_10878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAAAAAGAAAGAATAAT	8953	False	NA	NA	False	NA	NA	NA	106884642	106884407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106884400_106884600
Isoform_184638_11	chr8	-	180	1	Intergenic	novelGene_10879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	106898225	106898045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106898000_106898200
Isoform_184639_24	chr8	-	2090	1	Antisense	novelGene_ENSMUSG00000031904.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	9414	False	NA	NA	False	NA	NA	NA	106919036	106916946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_106916900_106919000
Isoform_184640_3	chr8	-	347	1	Intergenic	novelGene_10880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	514	False	NA	NA	False	NA	NA	NA	106935075	106934728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106934700_106935100
Isoform_184641_5	chr8	-	238	1	Intergenic	novelGene_10881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCACTTGGGAGGCAGA	516	False	NA	NA	False	AAAAAG	-40	NA	106935073	106934835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106934800_106935100
Isoform_184642_5	chr8	+	176	1	Intergenic	novelGene_10882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCGGAGCTGGGCTGACC	NA	False	NA	NA	False	NA	NA	NA	106935366	106935542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_106935400_106935500
Isoform_184643_4	chr8	-	972	1	Intergenic	novelGene_10883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTACACACAACTAGCC	NA	False	NA	NA	False	NA	NA	NA	106972869	106971897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106971900_106972900
Isoform_184644_6	chr8	-	176	1	Intergenic	novelGene_10884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTTTTTAGA	9080	False	NA	NA	False	NA	NA	NA	107029140	107028964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107029000_107029100
Isoform_184646_24	chr8	-	189	1	Antisense	novelGene_ENSMUSG00000061048.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGAAAAGAACAATTTTG	9109	False	NA	NA	False	NA	NA	NA	107284093	107283904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_107283900_107284100
Isoform_184647_11	chr8	-	180	1	Intergenic	novelGene_10885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCTTTAAAAAAAAAAAAA	3136	False	NA	NA	False	NA	NA	NA	107290066	107289886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107289900_107290100
Isoform_184649_4	chr8	-	179	1	Intergenic	novelGene_10886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGCTATTGTTCAGA	NA	False	NA	NA	False	NA	NA	NA	107296950	107296771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107296800_107297000
Isoform_184656_34	chr8	-	456	1	FSM	ENSMUSG00000060019.7	ENSMUST00000073722.7	342	1	-109	-5	-109	5	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAAGTTGGCCA	NA	False	NA	NA	False	ACTAAA	-2	NA	107300091	107299635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107299600_107300100
Isoform_184658_25	chr8	-	177	1	Intergenic	novelGene_10887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCCA	NA	False	NA	NA	False	NA	NA	NA	107300296	107300119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107300100_107300300
Isoform_184659_3	chr8	-	178	1	Intergenic	novelGene_10888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCTCCAGTAG	NA	False	NA	NA	False	NA	NA	NA	107322424	107322246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107322200_107322400
Isoform_184660_74	chr8	+	174	1	Intergenic	novelGene_10509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	14057870	14058044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_14057900_14058000
Isoform_184678_4	chr8	-	192	1	Intergenic	novelGene_10889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	107442553	107442361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107442400_107442600
Isoform_184679_3	chr8	-	1068	1	Intergenic	novelGene_10510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	14064646	14063578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_14063600_14064600
Isoform_18468_24624	chr11	-	1903	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	50	-1	-3	1	multi-exon	TRUE	canonical	3	5636	junction_4	454.292680988809	24624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTGGTTTGGC	NA	False	NA	-20	True	AATAAA	-19	NA	120239318	120236514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
Isoform_184680_6	chr8	+	200	1	Intergenic	novelGene_10890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAATCTTTGTTTGTT	7089	False	NA	NA	False	NA	NA	NA	107513349	107513549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_107513300_107513500
Isoform_184681_5	chr8	-	362	1	Intergenic	novelGene_10891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCCATTTAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	107529498	107529136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107529100_107529500
Isoform_18469_492	chr11	-	1931	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	21	0	21	0	multi-exon	FALSE	canonical	3	5636	junction_4	454.292680988809	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTTTTCTGGTTTGG	NA	False	NA	-21	True	AATAAA	-18	NA	120239347	120236515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
Isoform_184694_19	chr8	+	183	1	Intergenic	novelGene_10892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTGGGT	NA	False	NA	NA	False	NA	NA	NA	107650523	107650706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_107650500_107650700
Isoform_184696_10	chr8	+	240	1	Intergenic	novelGene_10893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGCAGTGACAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	107661476	107661716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_107661500_107661700
Isoform_184697_139	chr5	-	169	1	Intergenic	novelGene_8466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	35121147	35120978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_35121000_35121100
Isoform_184698_5	chr8	+	4878	1	ISM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	79087	0	78688	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTGTCTCTTGTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	107741468	107746346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_107741500_107746300
Isoform_1847_896	chr10	-	1065	7	FSM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	20	5	-18	1	multi-exon	FALSE	canonical	3	1217	junction_2	78.0243907733701	896	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAAAGTGTTTACTTCC	NA	False	NA	-28	True	AATAAA	-18	NA	33895600	33872555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
Isoform_184701_7	chr8	-	254	1	Intergenic	novelGene_10895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	107754246	107753992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107754000_107754200
Isoform_184703_56	chr8	+	207	1	Intergenic	novelGene_10896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATGCCTATAAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	107760467	107760674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_107760500_107760700
Isoform_184705_16	chr8	+	848	1	Antisense	novelGene_ENSMUSG00000078931.5_AS_novelGene_ENSMUSG00000031916.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCACGTGTCCAAGGTT	NA	False	NA	NA	False	AATAAA	-26	NA	107774862	107775710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_107774900_107775700
Isoform_184711_3	chr8	-	1242	1	Intergenic	novelGene_10897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATGAATAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	107836100	107834858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107834900_107836100
Isoform_184712_8	chr16	+	177	1	Intergenic	novelGene_4560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	57052515	57052692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_57052500_57052700
Isoform_184713_39	chr8	-	176	1	Intergenic	novelGene_10898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATTTTGACCAAAA	NA	False	NA	NA	False	NA	NA	NA	107870801	107870625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107870600_107870800
Isoform_184714_5	chr8	-	6553	2	Antisense	novelGene_ENSMUSG00000031924.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107886969	107880370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_107883276_107883321
Isoform_184718_431	chr8	+	165	1	Intergenic	novelGene_10474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	1185	False	NA	NA	False	NA	NA	NA	3667148	3667313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_3667100_3667300
Isoform_184740_816	chr8	-	558	1	FSM	ENSMUSG00000057657.5	ENSMUST00000080443.8	456	1	-43	-59	-43	59	mono-exon	FALSE	NA	NA	NA	NA	NA	816	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTAAAGAACATTGTAC	NA	False	NA	-10	True	AATAAA	-31	NA	107989923	107989365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_107989400_107989900
Isoform_184746_8	chr8	-	189	1	Intergenic	novelGene_10511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAATCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	14100690	14100501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_14100500_14100700
Isoform_184747_144	chr8	+	181	1	Intergenic	novelGene_10900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAAACACACCCCCATT	NA	False	NA	3	True	NA	NA	NA	108122389	108122570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_108122400_108122600
Isoform_184748_50	chr8	+	199	1	Intergenic	novelGene_10901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGAGGAAGGG	NA	False	NA	NA	False	NA	NA	NA	108126717	108126916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_108126700_108126900
Isoform_184751_10	chr8	+	2085	1	FSM	ENSMUSG00000074461.3	ENSMUST00000098916.3	2130	1	34	11	34	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTTTCAATAAGACT	4341	False	NA	NA	False	NA	NA	NA	14140494	14142579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_14140500_14142600
Isoform_184754_6	chr8	+	177	1	Intergenic	novelGene_10902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	108161366	108161543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_108161400_108161500
Isoform_184756_7	chr8	-	273	1	FSM	ENSMUSG00000059775.6	ENSMUST00000077208.6	449	1	180	-4	165	4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTTTATCGCTTCTA	NA	False	NA	NA	False	AATAAA	-41	NA	108166031	108165758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_108165800_108166000
Isoform_184757_4	chr8	-	364	1	FSM	ENSMUSG00000059775.6	ENSMUST00000077208.6	449	1	89	-4	74	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTTTATCGCTTCTA	NA	False	NA	NA	False	AATAAA	-41	NA	108166122	108165758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_108165800_108166100
Isoform_184759_3	chr8	+	2945	1	NIC	ENSMUSG00000047495.16	novel	3842	15	NA	NA	9	-408882	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCCAAACCAAACAAACAAA	9730	False	NA	NA	False	NA	NA	NA	14145883	14148828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_14145900_14148800
Isoform_184760_19	chr8	-	186	1	Intergenic	novelGene_10903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGAAGCCATGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	108291294	108291108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_108291100_108291300
Isoform_184767_49	chr8	-	177	1	Intergenic	novelGene_10904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	108315595	108315418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_108315400_108315600
Isoform_184769_41	chr8	+	278	1	Intergenic	novelGene_10906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTCCGAGACA	NA	False	NA	NA	False	NA	NA	NA	108317905	108318183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_108317900_108318200
Isoform_184770_5	chr8	-	3470	2	Intergenic	novelGene_10908	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTGGAATCTTCACAGG	NA	False	NA	NA	False	NA	NA	NA	108408873	108405377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_108408362_108408387
Isoform_184774_3	chr8	-	161	1	Intergenic	novelGene_10909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	8818	False	NA	NA	False	NA	NA	NA	109242887	109242726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_109242700_109242900
Isoform_184775_3	chr8	-	3221	1	Antisense	novelGene_ENSMUSG00000038872.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCATCATATCCATAAGT	6609	False	NA	NA	False	TTTAAA	-11	NA	109675591	109672370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_109672400_109675600
Isoform_184777_18	chr8	-	175	1	Intergenic	novelGene_10910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGAAGTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	109890064	109889889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_109889900_109890100
Isoform_184778_174	chr8	-	1108	1	FSM	ENSMUSG00000110528.2	ENSMUST00000211890.2	174	1	-44	-890	-44	890	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	110067540	110066432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_110066400_110067500
Isoform_184781_5	chr8	-	3745	1	Antisense	novelGene_ENSMUSG00000031723.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110296404	110292659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_110292700_110296400
Isoform_184782_15	chr8	-	343	1	Intergenic	novelGene_10911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAAGTTGGTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	110316750	110316407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_110316400_110316800
Isoform_184783_4	chr8	+	162	1	Intergenic	novelGene_10512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	14396172	14396334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_14396200_14396300
Isoform_184785_8	chr8	+	164	1	Antisense	novelGene_ENSMUSG00000031729.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAACCCACTT	NA	False	NA	NA	False	NA	NA	NA	110401448	110401612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_110401400_110401600
Isoform_184786_12	chr8	+	176	1	Intergenic	novelGene_10912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	110404711	110404887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_110404700_110404900
Isoform_184789_3	chr8	-	2909	1	NIC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	3	-1312	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	110464368	110461459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_110461500_110464400
Isoform_184791_4	chr8	-	196	1	Intergenic	novelGene_10913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTTAAAAAGAAATC	4329	False	NA	NA	False	NA	NA	NA	110485486	110485290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_110485300_110485500
Isoform_184792_4	chr8	-	5145	1	Intergenic	novelGene_10914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3388	False	NA	NA	False	NA	NA	NA	110518791	110513646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_110513600_110518800
Isoform_184793_5	chr8	-	338	1	Intergenic	novelGene_10915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACCTGAGACCCTAT	NA	False	NA	NA	False	NA	NA	NA	110528067	110527729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_110527700_110528100
Isoform_184794_56	chr19	+	176	1	Intergenic	novelGene_5721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTTCTAA	5802	False	NA	NA	False	NA	NA	NA	25180886	25181062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_25180900_25181100
Isoform_184795_4	chr8	-	2380	1	Intergenic	novelGene_10513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTCTTGGTGTTATG	NA	False	NA	NA	False	NA	NA	NA	14929263	14926883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_14926900_14929300
Isoform_184801_3	chr8	+	193	1	Intergenic	novelGene_10514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGGGGACAAGCCAAATG	NA	False	NA	NA	False	NA	NA	NA	14934737	14934930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_14934700_14934900
Isoform_184802_411	chr8	-	176	1	Intergenic	novelGene_10917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111211432	111211256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111211300_111211400
Isoform_184803_37	chr8	-	168	1	Intergenic	novelGene_10918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGTCGTCTGTTCATG	8953	False	NA	-3	True	NA	NA	NA	111249185	111249017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111249000_111249200
Isoform_184809_110	chr8	+	183	1	Intergenic	novelGene_10919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111489875	111490058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111489900_111490100
Isoform_184810_17	chr8	+	173	1	Intergenic	novelGene_10920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	111507497	111507670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111507500_111507700
Isoform_184814_4	chr8	+	423	1	Antisense	novelGene_ENSMUSG00000033732.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7201	False	NA	NA	False	NA	NA	NA	111571238	111571661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_111571200_111571700
Isoform_184815_23	chr8	-	1457	1	FSM	ENSMUSG00000033732.11	ENSMUST00000212843.2	1409	1	-66	18	-6	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	111573425	111571968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_111572000_111573400
Isoform_184818_10	chr8	-	173	1	Intergenic	novelGene_10921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAAAGCACG	NA	False	NA	NA	False	NA	NA	NA	111578699	111578526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111578500_111578700
Isoform_184819_32	chr8	-	177	1	Intergenic	novelGene_10922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111581711	111581534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111581500_111581700
Isoform_18482_9	chr4	+	748	1	FSM	ENSMUSG00000059195.11	ENSMUST00000121430.2	1128	1	-74	454	-74	-454	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGCTACTGCTGCAT	NA	False	NA	NA	False	CATAAA	-37	NA	103420524	103421272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_+_103420500_103421300
Isoform_184821_220	chr2	-	174	1	Antisense	novelGene_ENSMUSG00000026755.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38900283	38900109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_-_38900100_38900300
Isoform_184824_13	chr9	-	177	1	Intergenic	novelGene_11173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAACTCAG	NA	False	NA	NA	False	NA	NA	NA	31404865	31404688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_31404700_31404900
Isoform_184827_12	chr8	-	174	1	Intergenic	novelGene_10923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	111657228	111657054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111657100_111657200
Isoform_184828_4	chr8	-	186	1	Intergenic	novelGene_10924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGAAACTAGGGCACT	NA	False	NA	NA	False	NA	NA	NA	111668768	111668582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111668600_111668800
Isoform_184830_5	chr8	+	321	1	Intergenic	novelGene_10925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	111675440	111675761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111675400_111675800
Isoform_184831_37	chr7	-	177	1	Intergenic	novelGene_10428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATGTAGG	NA	False	NA	NA	False	NA	NA	NA	138953849	138953672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_138953700_138953800
Isoform_184833_21	chr8	+	177	1	Intergenic	novelGene_10926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	111721500	111721677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111721500_111721700
Isoform_184850_49	chr8	+	185	1	Intergenic	novelGene_10927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCAATGGC	NA	False	NA	NA	False	NA	NA	NA	111749317	111749502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111749300_111749500
Isoform_184851_8	chr8	+	234	1	Intergenic	novelGene_10928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTCAAAGTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111753459	111753693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111753500_111753700
Isoform_184856_66	chr8	+	1295	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	-30	61	-30	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACATCTGTTGTGTTTTT	NA	False	NA	9	True	AGTAAA	-26	NA	111782940	111784235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111782900_111784200
Isoform_184859_582	chr8	+	1242	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	23	61	23	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	582	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACATCTGTTGTGTTTTT	NA	False	NA	9	True	AGTAAA	-26	NA	111782993	111784235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111783000_111784200
Isoform_184860_40	chr8	+	1337	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	-11	0	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGAGTCTGTGTTT	NA	False	NA	70	True	NA	NA	NA	111782959	111784296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_111783000_111784300
Isoform_18487_8	chr11	-	3258	9	FSM	ENSMUSG00000025384.16	ENSMUST00000135635.8	3766	9	1	507	1	0	multi-exon	FALSE	canonical	1	16	junction_4	18.3809514171601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269560	120260387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153
Isoform_184870_4	chr8	+	179	1	Intergenic	novelGene_10929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACAATAACCACAAC	NA	False	NA	NA	False	NA	NA	NA	111795870	111796049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111795900_111796000
Isoform_184871_4	chr8	-	174	1	Intergenic	novelGene_10930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGTTCAGGGCTGTA	NA	False	NA	NA	False	NA	NA	NA	111801518	111801344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111801300_111801500
Isoform_184872_6	chr8	-	159	1	Intergenic	novelGene_10931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTAAG	NA	False	NA	NA	False	NA	NA	NA	111810750	111810591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111810600_111810800
Isoform_184873_5	chr8	+	156	1	Intergenic	novelGene_10932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACAGAG	NA	False	NA	NA	False	NA	NA	NA	111817612	111817768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111817600_111817800
Isoform_184874_7	chr8	-	174	1	Intergenic	novelGene_10933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGGGCTGGCATAGAA	NA	False	NA	NA	False	NA	NA	NA	111837778	111837604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111837600_111837800
Isoform_184875_27	chr8	-	174	1	Intergenic	novelGene_10934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACC	3710	False	NA	NA	False	NA	NA	NA	111860328	111860154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111860200_111860300
Isoform_18488_70	chr11	-	3156	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	37	0	8	0	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269553	120260387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
Isoform_18489_21	chr11	-	3199	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	-6	0	-6	0	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269596	120260387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
Isoform_184906_160	chr8	-	175	1	Intergenic	novelGene_10935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTTTTTGTACAG	NA	False	NA	NA	False	NA	NA	NA	111912929	111912754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_111912800_111912900
Isoform_184907_19	chr8	+	203	1	Intergenic	novelGene_10936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGGAGAAATTGCTTAA	3098	False	NA	NA	False	AATAAA	-16	NA	111917247	111917450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111917200_111917400
Isoform_184908_119	chr8	+	190	1	Intergenic	novelGene_10937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTATATGAGTACACT	1704	False	NA	29	True	NA	NA	NA	111942455	111942645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111942500_111942600
Isoform_18491_6	chr11	-	3035	9	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	16	junction_4	21.8274483162829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTGTGTTGTGCTC	NA	False	NA	-5	True	NA	NA	NA	120269553	120260389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269367
Isoform_184910_9	chr11	+	159	1	Intergenic	novelGene_2124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATACATAAATAA	7408	False	NA	NA	False	NA	NA	NA	100869575	100869734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_100869600_100869700
Isoform_184912_38	chr8	+	178	1	Intergenic	novelGene_10938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGACATTAGCATT	NA	False	NA	NA	False	NA	NA	NA	111968883	111969061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111968900_111969100
Isoform_184915_17	chr8	+	175	1	Intergenic	novelGene_10939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	111982240	111982415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111982200_111982400
Isoform_184918_53	chr8	+	185	1	Intergenic	novelGene_10940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACGTGGAA	NA	False	NA	NA	False	NA	NA	NA	111993039	111993224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_111993000_111993200
Isoform_18492_3	chr11	-	4295	9	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	16	junction_4	21.0237960416286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269560	120260387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120268488_120269153_120269273_120269367
Isoform_184927_8	chr8	+	162	1	Intergenic	novelGene_10515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACGTACGCAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	15569774	15569936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_15569800_15569900
Isoform_184929_15	chr17	-	161	1	Intergenic	novelGene_5064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	1246	False	NA	NA	False	NA	NA	NA	56608750	56608589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56608600_56608800
Isoform_184930_23	chr8	+	182	1	Intergenic	novelGene_10941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGACTTCCCCTGCTT	8507	False	NA	NA	False	NA	NA	NA	112027362	112027544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112027400_112027500
Isoform_184931_3	chr8	+	173	1	Intergenic	novelGene_10942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTATTTAAATATAGAT	9661	False	NA	NA	False	NA	NA	NA	112028516	112028689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112028500_112028700
Isoform_184932_19	chr8	+	176	1	Intergenic	novelGene_10943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGCATAAATGTATG	NA	False	NA	NA	False	NA	NA	NA	112032305	112032481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112032300_112032500
Isoform_184933_12	chr8	-	179	1	Intergenic	novelGene_10944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGATATGTTAT	NA	False	NA	NA	False	NA	NA	NA	112035665	112035486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112035500_112035700
Isoform_184934_5	chr8	+	184	1	Intergenic	novelGene_10945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGGGGGGCTGGAAA	NA	False	NA	NA	False	NA	NA	NA	112050938	112051122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112050900_112051100
Isoform_184935_7	chr8	+	184	1	Intergenic	novelGene_10946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGCAACCTCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	112130731	112130915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112130700_112130900
Isoform_184937_5	chr8	+	2015	1	Antisense	novelGene_ENSMUSG00000031959.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGTGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	112201267	112203282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_112201300_112203300
Isoform_184940_4	chr8	+	342	1	Intergenic	novelGene_10947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGTGGGGGGGAGATA	NA	False	NA	NA	False	NA	NA	NA	112245929	112246271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112245900_112246300
Isoform_184941_18	chr8	+	165	1	Intergenic	novelGene_10948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACACACACACACACAT	NA	False	NA	NA	False	NA	NA	NA	112252336	112252501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112252300_112252500
Isoform_184942_35	chr1	-	176	1	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74269657	74269481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_74269500_74269700
Isoform_184943_35	chr2	-	191	1	Intergenic	novelGene_6196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GATTAAAGAATCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37560644	37560453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_37560500_37560600
Isoform_184944_17	chr8	+	151	1	Intergenic	novelGene_10950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112259470	112259621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112259500_112259600
Isoform_184945_29	chr8	-	178	1	Intergenic	novelGene_10951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATGTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112281744	112281566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112281600_112281700
Isoform_184946_28	chr8	+	177	1	Intergenic	novelGene_10952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	112282385	112282562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112282400_112282600
Isoform_184948_89	chr8	-	164	1	Intergenic	novelGene_10954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGGAATCTGTA	NA	False	NA	NA	False	NA	NA	NA	112372152	112371988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112372000_112372200
Isoform_184949_7	chr8	-	171	1	Intergenic	novelGene_10955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	112395594	112395423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112395400_112395600
Isoform_184952_3	chr8	+	250	1	Intergenic	novelGene_10956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACCAAACAAACAA	NA	False	NA	NA	False	AAAACA	-20	NA	112434656	112434906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112434700_112434900
Isoform_184955_11	chr8	+	175	1	Intergenic	novelGene_10957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	112489799	112489974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112489800_112490000
Isoform_184959_35	chr8	-	174	1	Intergenic	novelGene_10958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATGTGTACAAA	NA	False	NA	NA	False	NA	NA	NA	112519065	112518891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112518900_112519100
Isoform_18496_548	chr11	-	3663	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	34	424	34	-424	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTTTTGAGTTACTCT	NA	False	NA	-5	True	AAGAAA	-19	NA	120328500	120271619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
Isoform_184960_52	chr8	-	177	1	Intergenic	novelGene_10959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112537043	112536866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112536900_112537000
Isoform_184961_7	chr8	+	180	1	Intergenic	novelGene_10960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	112583279	112583459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112583300_112583500
Isoform_184962_333	chr8	-	183	1	Intergenic	novelGene_10961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTTAGCT	NA	False	NA	-42	True	NA	NA	NA	112595975	112595792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112595800_112596000
Isoform_184963_3	chr8	+	185	1	Intergenic	novelGene_10962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGCTTGCACACGCATG	NA	False	NA	NA	False	AATAAA	-5	NA	112607298	112607483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112607300_112607500
Isoform_184964_31	chr8	+	185	1	Intergenic	novelGene_10963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAGTAAATGCCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112610707	112610892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112610700_112610900
Isoform_184966_75	chr8	+	170	1	Intergenic	novelGene_10964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112626449	112626619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112626400_112626600
Isoform_184969_25	chr8	-	231	1	Intergenic	novelGene_10965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGTCACAGAAT	NA	False	NA	NA	False	NA	NA	NA	112651221	112650990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112651000_112651200
Isoform_18497_412	chr11	-	4087	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	34	0	34	0	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGCTCCCAGTGCATT	NA	False	NA	-8	True	AATAAA	-16	NA	120328500	120271195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
Isoform_184972_4	chr8	-	4121	1	Genic_Genomic	ENSMUSG00000031949.18	novel	NA	NA	NA	NA	21446	2062	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTAGGCAGTGTTGGT	NA	False	NA	NA	False	TTTAAA	-32	NA	112695598	112691477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_112691500_112695600
Isoform_184973_64	chr8	-	176	1	Intergenic	novelGene_10966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAATAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	112697149	112696973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112697000_112697100
Isoform_184974_3	chr8	+	173	1	Intergenic	novelGene_10967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCTTTAAAAAAAGAAAAAAT	1003	False	NA	NA	False	NA	NA	NA	112699454	112699627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112699500_112699600
Isoform_184975_36	chr8	-	177	1	Intergenic	novelGene_10968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTACAGTA	NA	False	NA	NA	False	NA	NA	NA	112713495	112713318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112713300_112713500
Isoform_184976_4	chr8	-	660	1	NIC	ENSMUSG00000031949.18	novel	3159	10	NA	NA	31	-20059	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAACAAACTAACAA	NA	False	NA	NA	False	AAAACA	-16	NA	112718903	112718243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_112718200_112718900
Isoform_184978_16	chr8	+	1580	1	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAAGGGCT	NA	False	NA	NA	False	NA	NA	NA	112729457	112731037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_112729500_112731000
Isoform_184981_4	chr8	-	178	1	Intergenic	novelGene_10969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTCTCTGTGTAGCCCT	NA	False	NA	NA	False	NA	NA	NA	112748327	112748149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112748100_112748300
Isoform_184982_12	chr8	+	179	1	Intergenic	novelGene_10970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAAGGAGCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	112767296	112767475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112767300_112767500
Isoform_184983_5	chr8	-	173	1	Intergenic	novelGene_10971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAATCTATATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	112769288	112769115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_112769100_112769300
Isoform_184985_3	chr8	-	212	1	Intergenic	novelGene_10972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAACATGTGGGTTGA	NA	False	NA	NA	False	NA	NA	NA	113787732	113787520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_113787500_113787700
Isoform_184989_8	chr8	-	227	1	Intergenic	novelGene_10973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCCATTGAAGTACTT	NA	False	NA	NA	False	NA	NA	NA	115064839	115064612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_115064600_115064800
Isoform_185_889	ERCC-00145	+	1022	1	FSM	ERCC-00145A	DQ875386	1024	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	889	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	AAAAAG	-45	NA	1	1023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00145_+_0_1000
Isoform_18500_33	chr11	-	3700	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	-2	423	-2	-423	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGAGTTACTCTT	NA	False	NA	-4	True	AAGAAA	-20	NA	120328536	120271618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
Isoform_185009_12	chr8	+	178	1	Intergenic	novelGene_10974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTTGC	NA	False	NA	NA	False	NA	NA	NA	117379092	117379270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_117379100_117379300
Isoform_18501_12	chr11	-	4672	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	21	-572	21	572	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCTTTTATTTATTTAA	NA	False	NA	NA	False	NA	NA	NA	120328513	120270623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
Isoform_185010_3	chr8	+	167	1	Intergenic	novelGene_10975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	117393218	117393385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_117393200_117393400
Isoform_185012_11	chr8	+	172	1	Intergenic	novelGene_10976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAAAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	117594959	117595131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_117595000_117595100
Isoform_185013_10	chr8	+	233	1	Intergenic	novelGene_10977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117608841	117609074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_117608800_117609100
Isoform_185014_3	chr8	+	1933	1	Intergenic	novelGene_10978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117632207	117634140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_117632200_117634100
Isoform_185027_3	chr8	+	3195	1	Antisense	novelGene_ENSMUSG00000034424.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7469	False	NA	NA	False	NA	NA	NA	117709663	117712858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_117709700_117712900
Isoform_185031_3	chr8	-	2294	1	Antisense	novelGene_ENSMUSG00000052557.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTGTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-15	NA	117885247	117882953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_117883000_117885200
Isoform_185035_11	chr8	-	177	1	Intergenic	novelGene_10979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACATTTTAGGCG	NA	False	NA	NA	False	NA	NA	NA	118077131	118076954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_118077000_118077100
Isoform_185036_3	chr8	-	167	1	Intergenic	novelGene_10980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAGACTCCTGA	NA	False	NA	NA	False	NA	NA	NA	118115973	118115806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_118115800_118116000
Isoform_185039_21	chr2	-	176	1	Intergenic	novelGene_6315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	72285220	72285044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_72285000_72285200
Isoform_185040_33	chr8	+	177	1	Intergenic	novelGene_10981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAATTTGTT	NA	False	NA	NA	False	NA	NA	NA	118200549	118200726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_118200500_118200700
Isoform_185045_8	chr8	-	212	1	Intergenic	novelGene_10982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATAGCTGCGTAGTACT	NA	False	NA	NA	False	NA	NA	NA	118584893	118584681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_118584700_118584900
Isoform_185046_5	chr8	+	177	1	Intergenic	novelGene_10983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	119906938	119907115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_119906900_119907100
Isoform_185048_14	chr8	-	176	1	Intergenic	novelGene_10984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAGAAAAAG	8157	False	NA	NA	False	NA	NA	NA	120107994	120107818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_120107800_120108000
Isoform_185049_6	chr8	-	5126	1	Intergenic	novelGene_10516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6193	False	NA	NA	False	NA	NA	NA	18735385	18730259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_18730300_18735400
Isoform_185052_34	chr8	-	176	1	ISM	ENSMUSG00000031835.17	ENSMUST00000212685.2	6624	22	40938	9466	-1954	3794	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTCCTTTAACCC	NA	False	NA	NA	False	NA	NA	NA	120244536	120244360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_120244400_120244500
Isoform_185056_5	chr8	-	172	1	Intergenic	novelGene_10985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTTGTAATGGGAGC	NA	False	NA	NA	False	NA	NA	NA	120315462	120315290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_120315300_120315500
Isoform_185057_4	chr8	-	320	1	FSM	ENSMUSG00000081378.2	ENSMUST00000117927.2	456	1	202	-66	202	66	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGGCGTGGCTACATCC	3863	False	NA	NA	False	AATAAA	-41	NA	120329162	120328842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_120328800_120329200
Isoform_185061_53	chr11	-	176	1	Intergenic	novelGene_2060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAATAGAAAAAT	4499	False	NA	NA	False	NA	NA	NA	97145555	97145379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97145400_97145600
Isoform_185064_54	chr8	-	208	1	Intergenic	novelGene_10986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	120599694	120599486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_120599500_120599700
Isoform_18507_65	chr11	-	794	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	22	-3	22	3	multi-exon	FALSE	canonical	3	42	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGGGCTTTTGTGTTGT	981	False	NA	-3	True	AATAAA	-21	NA	120348872	120347428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120347989_120348638
Isoform_185070_28	chr1	+	176	1	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	30479055	30479231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_30479100_30479200
Isoform_185071_4	chr8	-	3018	1	Intergenic	novelGene_10987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120652782	120649764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_120649800_120652800
Isoform_185072_3	chr8	-	1147	1	Antisense	novelGene_ENSMUSG00000031826.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCTTTTTCTTGGAAG	2583	False	NA	NA	False	NA	NA	NA	120665545	120664398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_120664400_120665500
Isoform_18508_3	chr11	-	805	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	52	-44	52	44	multi-exon	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGAAAGCATGCCTAGG	1011	False	NA	38	True	GGGGCT	-32	NA	120348842	120347387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120347989_120348638
Isoform_185081_7	chr8	+	2536	1	FSM	ENSMUSG00000097944.2	ENSMUST00000183021.2	2323	1	-212	-1	-212	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTTCATCCTGAATTCC	NA	False	NA	NA	False	AATAAA	-20	NA	120828108	120830644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_120828100_120830600
Isoform_185083_14	chr8	-	155	1	Intergenic	novelGene_10988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATATTTAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	120835106	120834951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_120835000_120835100
Isoform_185085_6	chr8	+	1524	1	Intergenic	novelGene_10989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGTTAGAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121015446	121016970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_121015400_121017000
Isoform_185086_122	chr8	-	201	1	Intergenic	novelGene_10990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGATGTTCATTGAGAAC	NA	False	NA	0	True	NA	NA	NA	121047827	121047626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_121047600_121047800
Isoform_185087_4	chr8	-	186	1	Intergenic	novelGene_10991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	121095079	121094893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_121094900_121095100
Isoform_185088_3	chr8	-	175	1	Intergenic	novelGene_10517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGATCGAGCAGGGAG	65	False	NA	NA	False	NA	NA	NA	18846103	18845928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_18845900_18846100
Isoform_18509_15	chr11	-	774	2	FSM	ENSMUSG00000039670.3	ENSMUST00000137632.2	372	2	-122	-280	10	1	multi-exon	FALSE	canonical	2	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGGGGCTTTTGTGTT	969	False	NA	-5	True	AATAAA	-19	NA	120348884	120347430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120347989_120348668
Isoform_185093_144	chr8	-	177	1	Intergenic	novelGene_10992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121317921	121317744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_121317700_121317900
Isoform_185094_6	chr8	+	175	1	Intergenic	novelGene_10993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGCCCATACCAT	NA	False	NA	NA	False	NA	NA	NA	121317953	121318128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_121318000_121318100
Isoform_185095_6	chr8	-	172	1	Intergenic	novelGene_10994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTTAAAAAAAGTTGAA	NA	False	NA	NA	False	NA	NA	NA	121327221	121327049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_121327000_121327200
Isoform_185096_3	chr8	+	170	1	Intergenic	novelGene_10995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGTAGTCATG	NA	False	NA	NA	False	NA	NA	NA	121341320	121341490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_121341300_121341500
Isoform_185098_5	chr8	+	236	1	Intergenic	novelGene_10996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTCTGTGCTACCTAC	NA	False	NA	NA	False	NA	NA	NA	121389458	121389694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_121389500_121389700
Isoform_185099_20	chr8	-	1992	1	NIC	ENSMUSG00000031819.14	novel	4942	5	NA	NA	1	-5448	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	121394825	121392833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_121392800_121394800
Isoform_185101_3	chr8	-	161	1	Antisense	novelGene_ENSMUSG00000031818.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCAGAATGAGCGGGGTC	NA	False	NA	NA	False	NA	NA	NA	121396638	121396477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_121396500_121396600
Isoform_185106_388	chr8	+	175	1	Intergenic	novelGene_10997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	121451099	121451274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_121451100_121451300
Isoform_185107_6	chr8	-	170	1	Intergenic	novelGene_10998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTATATGTTAGCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	121726620	121726450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_121726400_121726600
Isoform_18511_6	chr11	-	1451	4	FSM	ENSMUSG00000057594.13	ENSMUST00000125806.8	607	4	-129	-715	2	-17	multi-exon	FALSE	canonical	3	126	junction_1	22.69116323349	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	CATAAA	-9	NA	120358289	120355708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007
Isoform_185110_8	chr8	+	2709	1	Intergenic	novelGene_11000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	122099194	122101903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_122099200_122101900
Isoform_185112_4	chr8	-	167	1	Intergenic	novelGene_11001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCTATGTGCA	NA	False	NA	NA	False	NA	NA	NA	122256682	122256515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_122256500_122256700
Isoform_185113_1191	chr8	-	186	1	Intergenic	novelGene_11002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGACCAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	122261290	122261104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_122261100_122261300
Isoform_185115_6	chr8	+	4446	2	Fusion	ENSMUSG00000097424.3_ENSMUSG00000098211.3	novel	964	3	NA	NA	-2	-1092	intron_retention	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	GGGGCT	-18	NA	122268816	122273299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr8_+_122273023_122273059
Isoform_185116_9	chr8	+	172	1	NIC	ENSMUSG00000097424.3	novel	618	3	NA	NA	3774	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGTGTCACAACC	NA	False	NA	NA	False	NA	NA	NA	122274900	122275072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_122274900_122275100
Isoform_185122_4	chr8	+	179	1	Intergenic	novelGene_11003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122330232	122330411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_122330200_122330400
Isoform_185123_27	chr8	-	1972	1	Intergenic	novelGene_10518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	6105	False	NA	NA	False	NA	NA	NA	18896167	18894195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_18894200_18896200
Isoform_185126_27	chr8	-	179	1	Intergenic	novelGene_11004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAATCCCACCAGTG	NA	False	NA	NA	False	NA	NA	NA	122383213	122383034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_122383000_122383200
Isoform_185128_12	chr8	-	176	1	Intergenic	novelGene_11005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAAGAAAG	6964	False	NA	NA	False	NA	NA	NA	122425971	122425795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_122425800_122426000
Isoform_185129_62	chr8	+	175	1	Intergenic	novelGene_11006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGTCTGACAGGT	827	False	NA	NA	False	NA	NA	NA	122439063	122439238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_122439100_122439200
Isoform_18514_785	chr11	-	1196	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	8	1	8	-1	multi-exon	FALSE	canonical	3	334	junction_4	30.2861354418156	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCCATGGCAGTCTG	NA	False	NA	-25	True	AATAAA	-16	NA	120440545	120433714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
Isoform_185149_4	chr8	+	2004	1	FSM	ENSMUSG00000074052.8	ENSMUST00000181944.2	1992	1	-16	4	-16	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACCGTTGGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	122634555	122636559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_122634600_122636600
Isoform_18515_15	chr11	-	1258	4	FSM	ENSMUSG00000061111.9	ENSMUST00000135515.2	1256	4	-3	1	-3	-1	multi-exon	FALSE	canonical	3	334	junction_3	32.7244387100664	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCCATGGCAGTCTG	NA	False	NA	-25	True	AATAAA	-16	NA	120440530	120433714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120434575_120434729_120434832_120435506_120435755_120440482
Isoform_185150_9	chr8	+	168	1	Intergenic	novelGene_11008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAATAACATCAACAACA	NA	False	NA	NA	False	NA	NA	NA	122651164	122651332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_122651200_122651300
Isoform_185151_4	chr8	+	246	1	Intergenic	novelGene_11007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGAGAAAAAAATGAAAA	NA	False	NA	NA	False	AAAACA	-43	NA	122651162	122651408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_122651200_122651400
Isoform_185152_23	chr8	-	180	1	Intergenic	novelGene_11009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGAATCCCGTCT	NA	False	NA	NA	False	NA	NA	NA	122656712	122656532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_122656500_122656700
Isoform_185156_59	chr8	+	204	1	Intergenic	novelGene_11010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGGATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	122732858	122733062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_122732900_122733100
Isoform_185157_14	chr8	+	2121	1	Intergenic	novelGene_10471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTCTAAAAAAAAAAAAAAAA	5619	False	NA	NA	False	AATAAA	-11	NA	3317489	3319610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_3317500_3319600
Isoform_185159_10	chr8	-	4172	1	Intergenic	novelGene_11011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTGAGAAAACTTAACT	NA	False	NA	NA	False	NA	NA	NA	123122591	123118419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_123118400_123122600
Isoform_185161_7	chr8	+	176	1	Intergenic	novelGene_10519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	18946412	18946588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_18946400_18946600
Isoform_185163_6	chr8	+	188	1	Intergenic	novelGene_11012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAAAAAAAAAAAGCTGG	5707	False	NA	NA	False	NA	NA	NA	123218730	123218918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_123218700_123218900
Isoform_185165_27	chr8	+	170	1	Intergenic	novelGene_11013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	7589	False	NA	NA	False	NA	NA	NA	123261913	123262083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_123261900_123262100
Isoform_185166_26	chr8	-	677	1	NIC	ENSMUSG00000014444.18	novel	8216	51	NA	NA	5	-64724	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	6116	False	NA	NA	False	NA	NA	NA	123278063	123277386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_123277400_123278100
Isoform_185167_3	chr8	-	1014	1	Genic_Genomic	ENSMUSG00000014444.18	novel	NA	NA	NA	NA	-332	-64724	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	5779	False	NA	NA	False	NA	NA	NA	123278400	123277386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_123277400_123278400
Isoform_185168_4	chr8	-	178	1	Intergenic	novelGene_11014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	123285503	123285325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_123285300_123285500
Isoform_185169_28	chr8	-	199	1	Intergenic	novelGene_11015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATAAATAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	123286624	123286425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_123286400_123286600
Isoform_185173_7	chr8	-	1567	1	Intergenic	novelGene_11016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCTTTCTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	123294604	123293037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_123293000_123294600
Isoform_185178_10	chr8	-	248	1	Intergenic	novelGene_11017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTCATCTCGTCGTCT	NA	False	NA	NA	False	NA	NA	NA	123343898	123343650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_123343600_123343900
Isoform_185180_18	chr8	+	160	1	Intergenic	novelGene_11018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	123570659	123570819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_123570700_123570800
Isoform_185181_19	chr8	+	173	1	Intergenic	novelGene_11019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAACCAGCACTCGTGA	NA	False	NA	NA	False	NA	NA	NA	123571744	123571917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_123571700_123571900
Isoform_185182_3	chr8	-	172	1	Intergenic	novelGene_11020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATCTTGATCATGG	NA	False	NA	NA	False	NA	NA	NA	123583667	123583495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_123583500_123583700
Isoform_185183_6	chr8	+	172	1	Intergenic	novelGene_10520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTCTTAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	19046906	19047078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_19046900_19047100
Isoform_185184_78	chr8	-	157	1	Intergenic	novelGene_11021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCATTCAATGGG	NA	False	NA	-1	True	NA	NA	NA	123585217	123585060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_123585100_123585200
Isoform_185186_3130	chr8	+	681	1	FSM	ENSMUSG00000081094.5	ENSMUST00000122422.3	591	1	-6	-84	-6	84	mono-exon	FALSE	NA	NA	NA	NA	NA	3130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATGGGACT	7111	False	NA	NA	False	AATAAA	-19	NA	19542945	19543626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_19542900_19543600
Isoform_185197_3	chr8	+	679	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	129	1329	129	-1329	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTGGTATAGGCTTTT	NA	False	NA	NA	False	CATAAA	-19	NA	123769333	123770012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123769300_123770000
Isoform_185198_17	chr8	+	1967	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	162	8	162	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATACTCATGTTTTAC	NA	False	NA	1	True	NA	NA	NA	123769366	123771333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123769400_123771300
Isoform_185206_98	chr8	+	170	1	Intergenic	novelGene_11022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGGAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	123828074	123828244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_123828100_123828200
Isoform_185214_14	chr8	+	435	1	FSM	ENSMUSG00000069862.7	ENSMUST00000139165.2	399	1	10	-46	10	46	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGTGCCTACATTTCAG	NA	False	NA	NA	False	AATAAA	-42	NA	123933371	123933806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_123933400_123933800
Isoform_185220_17	chr8	+	183	1	Intergenic	novelGene_11023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	123967741	123967924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_123967700_123967900
Isoform_185223_39	chr8	+	174	1	Intergenic	novelGene_11024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAAATGGCTGTACT	NA	False	NA	NA	False	NA	NA	NA	124046495	124046669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124046500_124046700
Isoform_185224_135	chr8	+	178	1	Intergenic	novelGene_11025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	544	False	NA	NA	False	NA	NA	NA	124048155	124048333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124048200_124048300
Isoform_185225_41	chr8	-	194	1	Intergenic	novelGene_11026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATACACCCTGTTTGCTC	NA	False	NA	NA	False	NA	NA	NA	124053133	124052939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124052900_124053100
Isoform_185226_5	chr8	+	162	1	Intergenic	novelGene_11027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGCCGGAGCGAGCGG	4541	False	NA	NA	False	NA	NA	NA	124071676	124071838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124071700_124071800
Isoform_185227_4	chr8	-	200	1	Intergenic	novelGene_11028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGACTGGTCCCA	NA	False	NA	NA	False	NA	NA	NA	124084080	124083880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124083900_124084100
Isoform_185228_6	chr8	-	176	1	Intergenic	novelGene_11029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTCAACCCTAAA	NA	False	NA	NA	False	NA	NA	NA	124093097	124092921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124092900_124093100
Isoform_185234_13	chr8	-	158	1	Intergenic	novelGene_11030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATTTAAAAT	7571	False	NA	NA	False	NA	NA	NA	124142227	124142069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124142100_124142200
Isoform_185235_3	chr8	+	294	1	Intergenic	novelGene_11031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	124146106	124146400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124146100_124146400
Isoform_185236_8	chr8	+	172	1	Intergenic	novelGene_11032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTTAATCCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	124146109	124146281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124146100_124146300
Isoform_185238_17	chr8	-	184	1	Intergenic	novelGene_11033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAACAATGAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	124193455	124193271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124193300_124193500
Isoform_185241_3	chr8	-	195	1	Intergenic	novelGene_11034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTTTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	124352654	124352459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124352500_124352700
Isoform_185242_21	chr8	+	173	1	Intergenic	novelGene_11035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	124371729	124371902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124371700_124371900
Isoform_185243_23	chr8	-	169	1	Intergenic	novelGene_11036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124372868	124372699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124372700_124372900
Isoform_185244_55	chr8	+	186	1	Intergenic	novelGene_10522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19755242	19755428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_19755200_19755400
Isoform_185245_30	chr8	-	190	1	Intergenic	novelGene_11037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAGTTTAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	124522794	124522604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124522600_124522800
Isoform_185246_81	chr8	+	173	1	Intergenic	novelGene_11038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAAGGAGCTTG	NA	False	NA	NA	False	NA	NA	NA	124536311	124536484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124536300_124536500
Isoform_185247_12	chr8	-	158	1	Intergenic	novelGene_11039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124542079	124541921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124541900_124542100
Isoform_185252_12	chr8	+	177	1	Intergenic	novelGene_11041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	124597544	124597721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124597500_124597700
Isoform_185256_5	chr8	+	922	1	NIC	ENSMUSG00000110615.2	novel	1026	2	NA	NA	-4	-2448	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAGAAAAGCATT	NA	False	NA	NA	False	NA	NA	NA	124676154	124677076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_124676200_124677100
Isoform_185258_55	chr8	-	173	1	Intergenic	novelGene_11042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGGAGACAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	124684653	124684480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124684500_124684700
Isoform_185259_3	chr8	+	172	1	Intergenic	novelGene_11043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	124691985	124692157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124692000_124692200
Isoform_185260_6	chr8	-	156	1	Intergenic	novelGene_11044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTACATATATATGGG	NA	False	NA	NA	False	NA	NA	NA	124694125	124693969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124694000_124694100
Isoform_185263_29	chr8	+	172	1	Intergenic	novelGene_11046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTGGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124712049	124712221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124712000_124712200
Isoform_185276_3	chr8	-	4755	1	Intergenic	novelGene_11047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	124780147	124775392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124775400_124780100
Isoform_185278_4	chr8	-	1448	1	Antisense	novelGene_ENSMUSG00000110458.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAAGAGAGGATTCTTG	NA	False	NA	NA	False	NA	NA	NA	20698460	20697012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_20697000_20698500
Isoform_185279_18	chr8	+	4234	1	FSM	ENSMUSG00000110669.2	ENSMUST00000212002.2	111	1	-17	-4106	-17	4106	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	AATGAA	-4	NA	19834744	19838978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_19834700_19839000
Isoform_185281_112	chr8	-	209	1	Intergenic	novelGene_11048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGACTGAGCATGCACCC	NA	False	NA	0	True	AATAAA	-8	NA	124791474	124791265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124791300_124791500
Isoform_185282_23	chr8	-	228	1	Intergenic	novelGene_11049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGAAACAGGGTCTCA	NA	False	NA	NA	False	ATTAAA	-31	NA	124801411	124801183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124801200_124801400
Isoform_185287_12	chr8	-	172	1	Intergenic	novelGene_11050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	125186021	125185849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_125185800_125186000
Isoform_185288_50	chr8	+	172	1	Intergenic	novelGene_11051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAATAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	125272877	125273049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_125272900_125273000
Isoform_185289_19	chr8	+	210	1	Intergenic	novelGene_11052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGTTATTTA	NA	False	NA	NA	False	NA	NA	NA	125322338	125322548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_125322300_125322500
Isoform_185290_29	chr8	-	186	1	Intergenic	novelGene_11053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAACAACT	NA	False	NA	NA	False	NA	NA	NA	125322743	125322557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_125322600_125322700
Isoform_185291_5	chr8	-	176	1	Intergenic	novelGene_11054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTCATT	NA	False	NA	NA	False	NA	NA	NA	125347403	125347227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_125347200_125347400
Isoform_185293_36	chr8	+	171	1	Intergenic	novelGene_11055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCGT	NA	False	NA	NA	False	NA	NA	NA	125385707	125385878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_125385700_125385900
Isoform_185295_132	chr8	+	4339	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-25061	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-39	NA	20016488	20020827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_20016500_20020800
Isoform_185298_403	chr8	+	4256	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	106	-25061	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-39	NA	20016571	20020827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_20016600_20020800
Isoform_185314_6	chr8	-	199	1	Intergenic	novelGene_11056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAGCAAAACCAAACACC	NA	False	NA	NA	False	NA	NA	NA	125607662	125607463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_125607500_125607700
Isoform_185315_3	chr8	-	5471	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	-66	-807	-66	807	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGAACTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	125624510	125619039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125619000_125624500
Isoform_185316_33	chr8	-	4664	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	-69	3	-69	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAAGTAGAGAACTTT	NA	False	NA	-27	True	AATAAA	-18	NA	125624513	125619849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_125619800_125624500
Isoform_185322_6	chr8	+	173	1	Intergenic	novelGene_11057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACCAAACCAAACCA	NA	False	NA	NA	False	NA	NA	NA	125646956	125647129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_125647000_125647100
Isoform_185323_25	chr8	+	175	1	Intergenic	novelGene_11058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATATATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125661510	125661685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_125661500_125661700
Isoform_185325_14	chr8	-	182	1	Intergenic	novelGene_10535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	21118314	21118132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_21118100_21118300
Isoform_185326_3	chr8	+	2287	1	Intergenic	novelGene_11059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGACAAAATAA	NA	False	NA	NA	False	NA	NA	NA	125981063	125983350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_125981100_125983400
Isoform_185332_51	chr8	+	2940	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	18	584	18	-584	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGTCTTGAAGAAAAGA	NA	False	NA	NA	False	ATTAAA	-20	NA	126396574	126399514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_126396600_126399500
Isoform_185333_117	chr8	+	3503	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	41	-2	41	2	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGGTGTTTATTTTTA	NA	False	NA	4	True	AATAAA	-17	NA	126396597	126400100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_126396600_126400100
Isoform_185335_11	chr8	+	3067	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	18	457	18	-457	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTGAGACCCCAAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	126396574	126399641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_126396600_126399600
Isoform_185338_35	chr8	-	167	1	Intergenic	novelGene_11060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGTGTGAAGTTT	NA	False	NA	0	True	NA	NA	NA	126452849	126452682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_126452700_126452800
Isoform_18534_510	chr11	-	2565	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	291	5	-121	2	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGTCACTGCTGCTTT	3658	False	NA	-9	True	AATAAA	-16	NA	120463788	120451128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
Isoform_185340_15	chr8	-	180	1	Intergenic	novelGene_11061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTTGTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	126650366	126650186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_126650200_126650400
Isoform_185342_5	chr8	-	195	1	Intergenic	novelGene_11063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCGAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	127117587	127117392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_127117400_127117600
Isoform_185343_29	chr8	+	180	1	Intergenic	novelGene_10536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAACCAAAAA	NA	False	NA	NA	False	AATAGA	-12	NA	21130922	21131102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_21130900_21131100
Isoform_185346_5	chr8	+	186	1	Intergenic	novelGene_11064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTCACCTGTCAGAAAAA	7346	False	NA	NA	False	NA	NA	NA	127276328	127276514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_127276300_127276500
Isoform_185347_71	chr8	+	159	1	Intergenic	novelGene_11065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAACAAAAAAAATTT	NA	False	NA	-16	True	NA	NA	NA	127303150	127303309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_127303200_127303300
Isoform_18535_7113	chr11	-	2475	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	381	5	-31	2	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	7113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGTCACTGCTGCTTT	3748	False	NA	-9	True	AATAAA	-16	NA	120463698	120451128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
Isoform_185353_6	chr8	+	177	1	Intergenic	novelGene_10530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	20603759	20603936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_20603800_20603900
Isoform_18536_129	chr11	-	2921	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	-64	4	-64	3	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTCACTGCTGCTTTA	3303	False	NA	-8	True	AATAAA	-17	NA	120464143	120451127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
Isoform_185363_6	chr8	-	176	1	Intergenic	novelGene_11066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCAGCAGG	NA	False	NA	NA	False	NA	NA	NA	127723695	127723519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_127723500_127723700
Isoform_185365_28	chr8	-	179	1	Intergenic	novelGene_11067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATATAAACA	NA	False	NA	NA	False	NA	NA	NA	127755325	127755146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_127755100_127755300
Isoform_185367_34	chr8	-	2546	1	Intergenic	novelGene_11068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127908332	127905786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_127905800_127908300
Isoform_185368_7	chr8	-	172	1	Intergenic	novelGene_11069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTTAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	127935256	127935084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_127935100_127935300
Isoform_18537_157	chr11	-	2868	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	-8	1	-8	-1	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACTGCTGCTTTATTT	3359	False	NA	-5	True	AATAAA	-20	NA	120464087	120451124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
Isoform_185370_5	chr8	+	7048	1	Intergenic	novelGene_10524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	20119955	20127003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_20120000_20127000
Isoform_185373_22	chr8	+	7017	1	Intergenic	novelGene_10525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	20119986	20127003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_20120000_20127000
Isoform_185379_4	chrY	+	663	1	Intergenic	novelGene_12350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATCAGAGTAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	60519239	60519902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_60519200_60519900
Isoform_185385_33	chr8	-	167	1	Intergenic	novelGene_11072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAATTA	NA	False	NA	NA	False	NA	NA	NA	129582385	129582218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_129582200_129582400
Isoform_185388_4	chr8	+	4376	1	Genic_Genomic	ENSMUSG00000071796.14	novel	NA	NA	NA	NA	-89	-24860	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	7099	False	NA	NA	False	NA	NA	NA	20143758	20148134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_20143800_20148100
Isoform_185391_21	chr8	+	4294	1	Genic_Genomic	ENSMUSG00000071796.14	novel	NA	NA	NA	NA	-8	-24861	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTAATAGTTGAGCATC	7180	False	NA	NA	False	NA	NA	NA	20143839	20148133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_20143800_20148100
Isoform_185392_4	chr8	-	3227	1	Intergenic	novelGene_10526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTTATAATTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	20156515	20153288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_20153300_20156500
Isoform_185395_4	chr8	+	301	1	Genic_Genomic	ENSMUSG00000065952.14	novel	NA	NA	NA	NA	-11	-5371	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	3617978	3618279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_3618000_3618300
Isoform_185396_7	chr8	-	178	1	Intergenic	novelGene_10534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATGTACT	NA	False	NA	NA	False	NA	NA	NA	21110858	21110680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_21110700_21110900
Isoform_185397_12	chr8	-	182	1	Intergenic	novelGene_10528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	20168677	20168495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_20168500_20168700
Isoform_185402_3	chr8	+	3444	1	Intergenic	novelGene_10529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAAAACCCAAAGCAA	5401	False	NA	NA	False	NA	NA	NA	20555711	20559155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_20555700_20559200
Isoform_185406_8	chr8	+	4368	1	FSM	ENSMUSG00000110458.2	ENSMUST00000211922.2	111	1	-106	-4151	-106	4151	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20697878	20702246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_20697900_20702200
Isoform_185415_18	chr8	-	174	1	Intergenic	novelGene_10527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGAAATGTAC	NA	False	NA	NA	False	NA	NA	NA	20161212	20161038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_20161000_20161200
Isoform_185417_27	chr8	-	7602	1	Antisense	novelGene_ENSMUSG00000096401.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATCA	NA	False	NA	NA	False	AAGAAA	-24	NA	20726283	20718681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_20718700_20726300
Isoform_185439_7	chr8	+	2136	2	Intergenic	novelGene_10531	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20724308	20726473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_20725033_20725061
Isoform_185451_36	chr8	+	193	1	Intergenic	novelGene_10532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATATATATATAAATAA	NA	False	NA	NA	False	NA	NA	NA	20730812	20731005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_20730800_20731000
Isoform_185453_30	chr8	+	4255	1	Intergenic	novelGene_10533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	5927	False	NA	NA	False	AATGAA	-39	NA	21090327	21094582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_21090300_21094600
Isoform_185457_10	chr8	-	181	1	Intergenic	novelGene_10523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	20041428	20041247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_20041200_20041400
Isoform_185465_40	chr8	+	192	1	Intergenic	novelGene_10521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATTGTCACATG	NA	False	NA	NA	False	NA	NA	NA	19750649	19750841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_19750600_19750800
Isoform_185470_5	chr8	-	176	1	Intergenic	novelGene_10537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	22574493	22574317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_22574300_22574500
Isoform_185473_3	chr8	+	755	1	Intergenic	novelGene_10538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22668655	22669410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_22668700_22669400
Isoform_185474_7	chr8	-	1403	1	NIC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	19	-9797	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAAAAAAAAGGTCACT	NA	False	NA	NA	False	NA	NA	NA	22675816	22674413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_22674400_22675800
Isoform_185475_4	chr8	+	176	1	Intergenic	novelGene_10539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAGGAGCAAGATAGG	5405	False	NA	NA	False	NA	NA	NA	22864946	22865122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_22864900_22865100
Isoform_185480_483	chr8	+	186	1	Intergenic	novelGene_10540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAAGTAAGAGA	NA	False	NA	NA	False	AATAAA	-6	NA	22913650	22913836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_22913600_22913800
Isoform_185481_3	chr8	+	154	1	Intergenic	novelGene_10541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCCCAGAAAAACGAAATG	3933	False	NA	NA	False	NA	NA	NA	22926216	22926370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_22926200_22926400
Isoform_185483_3	chr8	-	177	1	Intergenic	novelGene_10542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATATATTCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	22941344	22941167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_22941200_22941300
Isoform_185487_1026	chr15	-	164	1	Intergenic	novelGene_4215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1026	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAAGTATA	NA	False	NA	NA	False	NA	NA	NA	100254569	100254405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_100254400_100254600
Isoform_185491_127	chr8	+	189	1	Intergenic	novelGene_10544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	8336	False	NA	NA	False	NA	NA	NA	23093919	23094108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_23093900_23094100
Isoform_185492_18	chr8	+	186	1	Intergenic	novelGene_10545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	4477	False	NA	NA	False	NA	NA	NA	23100109	23100295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_23100100_23100300
Isoform_185493_5	chr8	+	317	1	FSM	ENSMUSG00000087687.4	ENSMUST00000208185.2	376	1	49	10	-2	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATATTTGGAAAAAAAAAA	5636	False	NA	NA	False	NA	NA	NA	3671599	3671916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_3671600_3671900
Isoform_185495_4	chr8	+	424	1	Intergenic	novelGene_10546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCAAAACCTGCT	3903	False	NA	NA	False	NA	NA	NA	23136044	23136468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_23136000_23136500
Isoform_185496_7	chrX	+	181	1	Intergenic	novelGene_12094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	100675764	100675945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100675800_100675900
Isoform_185497_3	chr8	+	3099	1	ISM	ENSMUSG00000031540.15	ENSMUST00000238975.2	9191	18	80626	0	26375	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTGCCTGTGGAA	NA	False	NA	9	True	AATAAA	-21	NA	23430176	23433275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_23430200_23433300
Isoform_185498_3	chr8	+	2570	1	ISM	ENSMUSG00000031540.15	ENSMUST00000238975.2	9191	18	81154	1	26903	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTTGCCTGTGGA	NA	False	NA	8	True	AATAAA	-20	NA	23430704	23433274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_23430700_23433300
Isoform_1855_41	chr10	-	1712	2	FSM	ENSMUSG00000049872.9	ENSMUST00000069125.8	5323	2	4	3607	4	-3607	multi-exon	FALSE	canonical	3	31	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCCATTTTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	33972511	33967417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_33968512_33971893
Isoform_185500_11	chr8	+	172	1	Intergenic	novelGene_10548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATATATGATTTAATAT	NA	False	NA	NA	False	NA	NA	NA	23527317	23527489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_23527300_23527500
Isoform_185501_3	chr8	+	4850	1	Antisense	novelGene_ENSMUSG00000031545.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAACAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	23666619	23671469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_23666600_23671500
Isoform_185502_9	chr8	+	157	1	Intergenic	novelGene_10550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	23689222	23689379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_23689200_23689400
Isoform_185505_5	chr8	+	4663	2	Antisense	novelGene_ENSMUSG00000031546.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCACAAATAGACATATGT	NA	False	NA	NA	False	NA	NA	NA	23716894	23721581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_23720261_23720284
Isoform_185507_5	chr8	-	175	1	Intergenic	novelGene_10551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	23895695	23895520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_23895500_23895700
Isoform_185525_113	chr8	+	171	1	Genic_Genomic	ENSMUSG00000012705.17	novel	NA	NA	NA	NA	4200	30	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGGTCATCCTGGT	NA	False	NA	NA	False	NA	NA	NA	3709969	3710140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_3710000_3710100
Isoform_185526_18	chr8	-	174	1	Intergenic	novelGene_10552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	24143627	24143453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_24143500_24143600
Isoform_185527_35	chr8	-	169	1	Intergenic	novelGene_10553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTGTAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24727203	24727034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_24727000_24727200
Isoform_185528_4	chr8	+	2305	1	Intergenic	novelGene_10554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1181	False	NA	NA	False	NA	NA	NA	25575249	25577554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_25575200_25577600
Isoform_185533_54	chr8	+	168	1	Intergenic	novelGene_10555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAGAAATAAG	1340	False	NA	NA	False	NA	NA	NA	25689034	25689202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_25689000_25689200
Isoform_185535_3	chr8	-	2029	1	FSM	ENSMUSG00000065954.12	ENSMUST00000209633.2	1050	1	-980	1	19	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-27	NA	25691539	25689510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_25689500_25691500
Isoform_185536_124	chr8	+	175	1	Intergenic	novelGene_10556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTTTAT	7061	False	NA	NA	False	NA	NA	NA	25701186	25701361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_25701200_25701400
Isoform_185537_233	chr8	-	159	1	Intergenic	novelGene_10557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	25705011	25704852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_25704900_25705000
Isoform_185538_12	chr8	+	185	1	Intergenic	novelGene_10558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCACACCTATCAGGAA	NA	False	NA	NA	False	NA	NA	NA	25705883	25706068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_25705900_25706100
Isoform_185539_5	chr8	+	179	1	Intergenic	novelGene_10559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTCCCATCTGTAAC	1511	False	NA	NA	False	NA	NA	NA	25787111	25787290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_25787100_25787300
Isoform_185540_15	chr8	+	177	1	Intergenic	novelGene_10560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATGAAGGACATTTTT	295	False	NA	NA	False	NA	NA	NA	25808951	25809128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_25809000_25809100
Isoform_185541_7	chr8	+	155	1	Intergenic	novelGene_10561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAAACAAATC	954	False	NA	NA	False	NA	NA	NA	25911171	25911326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_25911200_25911300
Isoform_185542_8	chr8	-	176	1	Intergenic	novelGene_10475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACATGTGT	NA	False	NA	NA	False	NA	NA	NA	3792706	3792530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_3792500_3792700
Isoform_185543_35	chr8	-	183	1	Intergenic	novelGene_10562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGTTAATAGGTTC	NA	False	NA	NA	False	NA	NA	NA	25956835	25956652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_25956700_25956800
Isoform_185546_3	chr8	-	1000	1	FSM	ENSMUSG00000037363.10	ENSMUST00000209734.2	1063	1	-38	101	-13	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCACCT	2336	False	NA	NA	False	NA	NA	NA	26087542	26086542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26086500_26087500
Isoform_185547_4	chr8	+	178	1	Intergenic	novelGene_10563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAAAT	NA	False	NA	NA	False	NA	NA	NA	26102885	26103063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_26102900_26103100
Isoform_185548_4	chr8	-	174	1	Intergenic	novelGene_10564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAAAAAAAGAT	2210	False	NA	NA	False	NA	NA	NA	26117087	26116913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_26116900_26117100
Isoform_185550_16	chr8	-	151	1	Intergenic	novelGene_10476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	4010438	4010287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_4010300_4010400
Isoform_185551_5	chr8	+	176	1	Intergenic	novelGene_10565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAACAAAGTATA	NA	False	NA	NA	False	NA	NA	NA	26246190	26246366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_26246200_26246400
Isoform_185552_235	chr11	+	176	1	Intergenic	novelGene_1672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAATCCGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	69515383	69515559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69515400_69515600
Isoform_185556_5	chr8	+	3636	2	Genic_Genomic	ENSMUSG00000097657.3	novel	2884	1	NA	NA	-196	580	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	4044429	4048089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_4044989_4045012
Isoform_185557_12	chr8	+	3576	2	Genic_Genomic	ENSMUSG00000097657.3	novel	2884	1	NA	NA	-135	581	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	4044490	4048090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_4044989_4045012
Isoform_185563_4	chr8	-	3063	1	Antisense	novelGene_ENSMUSG00000097657.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATGTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4048090	4045027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_4045000_4048100
Isoform_185580_4	chr8	+	1469	1	NIC	ENSMUSG00000031574.9	novel	4046	7	NA	NA	2481	1202	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26300982	26302451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_+_26301000_26302500
Isoform_185586_22	chr8	-	242	1	Intergenic	novelGene_10567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGATACTGGAG	NA	False	NA	NA	False	NA	NA	NA	26390931	26390689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_26390700_26390900
Isoform_185588_5	chr8	+	177	1	Intergenic	novelGene_10568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	26416134	26416311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_26416100_26416300
Isoform_185589_4	chr8	+	175	1	Intergenic	novelGene_10477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAATGGGCCTCCC	9861	False	NA	NA	False	NA	NA	NA	4191810	4191985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_4191800_4192000
Isoform_185591_44	chr8	-	172	1	Intergenic	novelGene_10569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	26438601	26438429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_26438400_26438600
Isoform_185592_9	chr8	-	174	1	Intergenic	novelGene_10478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGTTTTCT	9640	False	NA	NA	False	NA	NA	NA	4207844	4207670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_4207700_4207800
Isoform_185594_34	chr8	-	178	1	FSM	ENSMUSG00000037234.18	ENSMUST00000211777.2	1954	1	1450	326	1450	-325	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	26528619	26528441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_26528400_26528600
Isoform_185595_76	chr17	+	197	1	Intergenic	novelGene_5087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGGGCAATGATGGTGT	NA	False	NA	NA	False	NA	NA	NA	65701826	65702023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_65701800_65702000
Isoform_185599_10	chr8	+	225	1	Intergenic	novelGene_10570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACAGTCATCAGTGCTA	NA	False	NA	NA	False	NA	NA	NA	26605024	26605249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_26605000_26605200
Isoform_185601_6	chr8	+	183	1	ISM	ENSMUSG00000037214.13	ENSMUST00000127536.2	582	2	971	4	433	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAGAGAAAAATAAAAAT	NA	False	NA	3	True	NA	NA	NA	26649253	26649436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_+_26649300_26649400
Isoform_185603_3	chr8	-	181	1	Intergenic	novelGene_10571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTTAAAAAAGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	26881620	26881439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_26881400_26881600
Isoform_185604_3	chr18	+	176	1	Intergenic	novelGene_5438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAATTTAATTT	NA	False	NA	NA	False	NA	NA	NA	55888767	55888943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_55888800_55888900
Isoform_185606_4	chr8	+	616	1	FSM	ENSMUSG00000031485.16	ENSMUST00000211281.2	1862	1	-216	1462	11	-1462	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	27532636	27533252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_27532600_27533300
Isoform_185607_3	chr8	-	217	1	ISM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	35125	532	14955	-532	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAGAGAGAGAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	27629549	27629332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr8_-_27629300_27629500
Isoform_185610_57	chr8	-	186	1	Intergenic	novelGene_10572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTATGGCAAAATGTAC	NA	False	NA	NA	False	NA	NA	NA	27635869	27635683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_27635700_27635900
Isoform_185611_42	chr8	-	193	1	Intergenic	novelGene_10573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	27637069	27636876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_27636900_27637100
Isoform_185612_16	chr8	-	181	1	Intergenic	novelGene_10574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCGCATTTGTGTAAGA	NA	False	NA	NA	False	NA	NA	NA	27647008	27646827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_27646800_27647000
Isoform_185613_4	chr8	-	1255	1	NIC	ENSMUSG00000031488.15	novel	7965	6	NA	NA	0	-8192	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGTGTAGCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	27664669	27663414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr8_-_27663400_27664700
Isoform_185614_50	chr8	+	2785	1	Intergenic	novelGene_10575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-29	NA	27693077	27695862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_27693100_27695900
Isoform_185619_4	chr8	+	174	1	Intergenic	novelGene_10576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCCTAACTAA	NA	False	NA	NA	False	NA	NA	NA	27699534	27699708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_27699500_27699700
Isoform_18562_3604	chr11	-	1837	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	25	5	25	0	multi-exon	TRUE	canonical	3	3168	junction_5	160.793780974265	3604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATTGTGTGGTCTGTGC	NA	False	NA	-15	True	AATAAA	-17	NA	120472425	120468934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
Isoform_185622_43	chr8	+	176	1	Intergenic	novelGene_10577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACAAAACAACCA	NA	False	NA	NA	False	NA	NA	NA	27746765	27746941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_27746800_27746900
Isoform_185627_15	chr8	+	175	1	Intergenic	novelGene_10578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	27820226	27820401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_27820200_27820400
Isoform_185628_276	chr8	-	179	1	Intergenic	novelGene_10579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	27821697	27821518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_27821500_27821700
Isoform_185629_12	chr8	-	176	1	Intergenic	novelGene_10580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	27841912	27841736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_27841700_27841900
Isoform_185630_317	chr17	+	180	1	Intergenic	novelGene_5212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAGGAGGCCA	NA	False	NA	NA	False	NA	NA	NA	88096483	88096663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_88096500_88096700
Isoform_185631_18	chr8	+	173	1	Intergenic	novelGene_10581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTATAATCCTT	NA	False	NA	NA	False	NA	NA	NA	28427060	28427233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_28427100_28427200
Isoform_185633_9	chr8	-	396	1	FSM	ENSMUSG00000110331.2	ENSMUST00000209275.2	551	1	362	-207	362	207	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACCTGTAAAAAAAAAAAAA	NA	False	NA	-21	True	ATTAAA	-17	NA	29776647	29776251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_29776300_29776600
Isoform_185634_7	chr8	-	516	1	FSM	ENSMUSG00000110331.2	ENSMUST00000209275.2	551	1	242	-207	242	207	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACCTGTAAAAAAAAAAAAA	NA	False	NA	-21	True	ATTAAA	-17	NA	29776767	29776251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_29776300_29776800
Isoform_185635_7	chr8	-	578	1	FSM	ENSMUSG00000110331.2	ENSMUST00000209275.2	551	1	182	-209	182	209	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCTGTAAAAAAAAAAAAAAA	NA	False	NA	-19	True	ATTAAA	-19	NA	29776827	29776249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_29776200_29776800
Isoform_185637_6	chr8	+	206	1	Intergenic	novelGene_10582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCATGGTATCTGTTCAC	NA	False	NA	NA	False	NA	NA	NA	31570663	31570869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_31570700_31570900
Isoform_185638_7	chr8	+	175	1	Intergenic	novelGene_10583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAAGGAGTGAGCGGG	NA	False	NA	NA	False	NA	NA	NA	31589242	31589417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_31589200_31589400
Isoform_185639_48	chr8	-	176	1	Intergenic	novelGene_10584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	31607033	31606857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_31606900_31607000
Isoform_185640_7	chr8	-	175	1	Intergenic	novelGene_10585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	31626469	31626294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_31626300_31626500
Isoform_185644_5	chr8	+	180	1	Intergenic	novelGene_10586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGACTTGTTATAATT	NA	False	NA	NA	False	NA	NA	NA	31667394	31667574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_31667400_31667600
Isoform_185645_82	chr8	-	176	1	Intergenic	novelGene_10587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAACAGAA	NA	False	NA	NA	False	NA	NA	NA	32169949	32169773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_32169800_32169900
Isoform_185647_101	chr8	-	2968	1	FSM	ENSMUSG00000083557.2	ENSMUST00000119347.2	1101	1	-35	-1832	-35	1832	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATATCAGGG	NA	False	NA	NA	False	GATAAA	-16	NA	33682359	33679391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_-_33679400_33682400
Isoform_185648_3	chr8	-	171	1	Intergenic	novelGene_10479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATCTTTATTTCAGG	NA	False	NA	NA	False	NA	NA	NA	4327437	4327266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_4327300_4327400
Isoform_185649_4	chr8	+	178	1	Intergenic	novelGene_10588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGACCTGTTT	4297	False	NA	NA	False	NA	NA	NA	33968531	33968709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_33968500_33968700
Isoform_185652_14	chr2	+	170	1	Intergenic	novelGene_6424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTAAAAAAAGATGTGT	NA	False	NA	NA	False	NA	NA	NA	91988838	91989008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_91988800_91989000
Isoform_185654_270	chr8	+	342	1	Intergenic	novelGene_10589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTAAT	NA	False	NA	NA	False	NA	NA	NA	34035590	34035932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_34035600_34035900
Isoform_185656_3	chr8	-	3281	1	Genic_Genomic	ENSMUSG00000040028.11	novel	NA	NA	NA	NA	24352	395	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTGTAGACATTTTAA	NA	False	NA	-17	True	ATTAAA	-11	NA	4338267	4334986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_-_4335000_4338300
Isoform_185658_7	chr8	-	200	1	Intergenic	novelGene_10590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGAACTGGCCGCTCTTC	8438	False	NA	NA	False	NA	NA	NA	34128227	34128027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34128000_34128200
Isoform_185659_8	chr8	+	1106	1	Antisense	novelGene_ENSMUSG00000052906.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34131836	34132942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_34131800_34132900
Isoform_185660_21	chr8	+	913	1	Intergenic	novelGene_10591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34132029	34132942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_34132000_34132900
Isoform_185676_18	chr8	-	204	1	Intergenic	novelGene_10593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTGTTACCCAGC	NA	False	NA	NA	False	NA	NA	NA	34190932	34190728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34190700_34190900
Isoform_185677_4	chr8	-	217	1	Intergenic	novelGene_10594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTCCAGAGGCCATGAA	NA	False	NA	NA	False	TATAAA	-18	NA	34240901	34240684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34240700_34240900
Isoform_185678_4	chr8	-	157	1	Intergenic	novelGene_10595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAATCAT	NA	False	NA	NA	False	NA	NA	NA	34245148	34244991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34245000_34245100
Isoform_185680_4	chr8	-	4806	1	Antisense	novelGene_ENSMUSG00000031585.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGGTGGAGTCTATGG	NA	False	NA	NA	False	NA	NA	NA	34267628	34262822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_-_34262800_34267600
Isoform_185682_4	chr8	+	1292	1	Antisense	novelGene_ENSMUSG00000031586.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCTTAAAATGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	34272670	34273962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_34272700_34274000
Isoform_185683_25	chr8	-	177	1	Intergenic	novelGene_10596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAATTAGCAC	NA	False	NA	NA	False	NA	NA	NA	34311497	34311320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34311300_34311500
Isoform_185685_19	chr8	+	3318	1	Intergenic	novelGene_10480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4346460	4349778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_4346500_4349800
Isoform_185687_89	chr8	+	164	1	Intergenic	novelGene_10597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATTAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	34383258	34383422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_34383300_34383400
Isoform_185688_6	chr8	+	5142	1	FSM	ENSMUSG00000023235.15	ENSMUST00000207839.2	2461	1	-15	-2666	8	2666	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	4375217	4380359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr8_+_4375200_4380400
Isoform_185693_110	chr8	+	175	1	Intergenic	novelGene_10598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTCTAAAAAATGAC	NA	False	NA	NA	False	NA	NA	NA	34439000	34439175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_34439000_34439200
Isoform_185696_42	chr8	-	233	1	Intergenic	novelGene_10599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGCGACCATGAGTCA	NA	False	NA	NA	False	NA	NA	NA	34460777	34460544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34460500_34460800
Isoform_185697_6	chr8	+	177	1	Intergenic	novelGene_10600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	34467450	34467627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_34467400_34467600
Isoform_185698_10	chr8	+	170	1	Intergenic	novelGene_10601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTTTTCTTTTCTTTC	NA	False	NA	4	True	NA	NA	NA	34487248	34487418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_34487200_34487400
Isoform_185699_6	chr8	-	167	1	Intergenic	novelGene_10481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTCTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4397200	4397033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_4397000_4397200
Isoform_185701_8	chr8	+	234	1	Intergenic	novelGene_10603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTCTTTTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	34533847	34534081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_34533800_34534100
Isoform_185702_10	chr8	-	175	1	Intergenic	novelGene_10604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTTAAACTCATCAC	NA	False	NA	NA	False	NA	NA	NA	34539320	34539145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34539100_34539300
Isoform_185705_9	chr8	-	169	1	Intergenic	novelGene_10605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGGGGGGGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	34589553	34589384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34589400_34589600
Isoform_185709_4	chr8	-	176	1	Intergenic	novelGene_10606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAACAAAAAACAA	4994	False	NA	NA	False	NA	NA	NA	34759921	34759745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34759700_34759900
Isoform_185728_163	chr1	-	177	1	Intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120021786	120021609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_120021600_120021800
Isoform_185729_74	chr8	+	180	1	Intergenic	novelGene_10607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAGAAAAAGAAAA	9680	False	NA	NA	False	NA	NA	NA	35630476	35630656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_35630500_35630700
Isoform_185735_7	chr8	+	2339	1	Genic_Genomic	ENSMUSG00000050271.13	novel	NA	NA	NA	NA	-178	-5756	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36561803	36564142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr8_+_36561800_36564100
Isoform_185736_13	chr9	-	1998	5	ISM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	6	1173	6	-1001	intron_retention	FALSE	canonical	3	643	junction_4	110.637640520756	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTAAGTCTGTCGTCT	7	True	NA	34	True	AGTAAA	-13	NA	4309461	4295965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693
Isoform_185737_16	chr9	-	1354	5	ISM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-2	1826	0	-1655	intron_retention	FALSE	canonical	3	643	junction_4	110.637640520756	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTGCCTGATGTGA	-3	True	NA	NA	False	AATAAA	-29	NA	4309471	4296619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693
Isoform_185738_247	chr9	-	1043	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-4	1804	0	-1632	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTATTTAACAAAACAT	-3	True	NA	NA	False	AATAAA	-17	NA	4309471	4296596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_185741_20	chr9	-	2868	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	0	-25	0	25	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCCTTTTAGATT	1	True	NA	NA	False	NA	NA	NA	4309467	4294767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_185745_117	chr9	-	1610	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-4	1237	0	-1065	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACTCAGATGATTCTGAT	-3	True	NA	-30	True	GATAAA	-21	NA	4309471	4296029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_185747_100	chr9	-	1674	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-4	1173	0	-1001	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTAAGTCTGTCGTCT	-3	True	NA	34	True	AGTAAA	-13	NA	4309471	4295965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_185756_9	chr9	-	1572	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	7	1231	5	-1060	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGATTCTGATTTTTT	6	True	NA	-25	True	GATAAA	-26	NA	4309462	4296024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
Isoform_185757_10	chr9	-	1002	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-19	1827	-17	-1656	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAATTGCCTGATGTG	-20	True	NA	NA	False	AATAAA	-28	NA	4309488	4296620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
Isoform_185765_15	chr9	-	695	4	NIC	ENSMUSG00000025894.12	novel	2519	5	NA	NA	0	-1632	combination_of_known_splicesites	FALSE	canonical	3	71	junction_3	376.029549666276	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTATTTAACAAAACAT	-3	True	NA	NA	False	AATAAA	-17	NA	4309471	4296596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309253
Isoform_185769_6	chr9	-	3566	8	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	59	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	57.0273833257286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	39	True	NA	-2	True	AATAAA	-20	NA	7836999	7818228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836695
Isoform_185770_248	chr9	-	3328	8	FSM	ENSMUSG00000057367.13	ENSMUST00000190341.7	3331	8	-1	4	-1	-4	multi-exon	FALSE	canonical	3	127	junction_2	22.0352222681815	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTCTGATGTGATTCAT	-21	True	NA	-5	True	AATAAA	-17	NA	7837059	7818231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
Isoform_185773_56	chr9	-	3046	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	29	-1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	57.8234861933761	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	9	True	NA	-2	True	AATAAA	-20	NA	7837029	7818228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
Isoform_185774_4	chr9	-	2995	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	-1	-73	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	57.8234861933761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGCATCATTGTAGTGT	-21	True	NA	-83	True	ATTAAA	-15	NA	7837059	7818309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
Isoform_185776_33	chr9	-	2504	9	FSM	ENSMUSG00000032000.18	ENSMUST00000013949.15	2667	9	154	9	-13	-9	multi-exon	FALSE	canonical	3	8	junction_2	6.89202437604511	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAAATTGATGCTGGG	-26	True	NA	NA	False	AATAAA	-25	NA	7872871	7848708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
Isoform_185777_3	chr9	-	2658	9	FSM	ENSMUSG00000032000.18	ENSMUST00000013949.15	2667	9	-12	21	-12	-21	multi-exon	FALSE	canonical	3	8	junction_2	6.89202437604511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTTTTTTTTTAAAGAAA	-6	True	NA	NA	False	AATAAA	-13	NA	7873037	7848720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
Isoform_185779_7	chr9	-	2681	9	NIC	ENSMUSG00000032000.18	novel	2667	9	NA	NA	-36	-17	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	7.964766161037	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAGAAAATTG	NA	False	NA	NA	False	AATAAA	-17	NA	7873223	7848716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872990
Isoform_185781_3	chr9	-	4172	9	NIC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	78.6049258952643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTGTCAACTTTTT	6	True	NA	-12	True	AATAAA	-16	NA	8004598	7932005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962283_7962404_7973796_7973913_8001457_8001709_8004115
Isoform_185783_58	chr9	-	4211	9	FSM	ENSMUSG00000053110.14	ENSMUST00000065353.13	4171	9	-43	3	-43	-3	multi-exon	FALSE	canonical	3	70	junction_4	65.3241915372858	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCAACTTTTTTAC	-1	True	NA	-9	True	AATAAA	-19	NA	8004640	7932002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
Isoform_185785_8	chr9	-	4326	9	FSM	ENSMUSG00000053110.14	ENSMUST00000065353.13	4171	9	-158	3	-158	-3	multi-exon	FALSE	canonical	3	70	junction_4	65.3241915372858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCAACTTTTTTAC	NA	False	NA	-9	True	AATAAA	-19	NA	8004755	7932002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
Isoform_185786_88	chr9	-	4140	8	FSM	ENSMUSG00000053110.14	ENSMUST00000086580.12	4115	8	-29	4	-21	-4	multi-exon	FALSE	canonical	3	104	junction_1	48.6117479712088	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTCAACTTTTTTA	-14	True	NA	-10	True	AATAAA	-18	NA	8004618	7932003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
Isoform_185788_6	chr9	-	4294	8	FSM	ENSMUSG00000053110.14	ENSMUST00000086580.12	4115	8	-185	6	-177	-6	multi-exon	FALSE	canonical	3	104	junction_1	48.6117479712088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTGTCAACTTTTT	NA	False	NA	-12	True	AATAAA	-16	NA	8004774	7932005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
Isoform_185794_5	chr9	-	3982	11	FSM	ENSMUSG00000040729.9	ENSMUST00000037397.8	3819	11	-163	0	-163	0	multi-exon	FALSE	canonical	1	3	junction_3	3.74299345444258	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGATCTCTGCTTTTTAT	-4	True	NA	NA	False	AATAAA	-20	NA	8134458	8076461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_8076948_8079495_8079561_8087228_8087427_8092244_8092318_8095214_8095328_8099732_8101843_8103318_8103518_8112080_8112193_8120642_8120789_8130196_8130317_8134098
Isoform_185795_44	chr9	-	3791	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-10	-2437	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCATATTTTTTGCT	-1	True	NA	NA	False	AATAAA	-3	NA	9239116	8996766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
Isoform_185796_11	chr9	-	6258	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-42	-2	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTCTCTTTTGTAGT	NA	False	NA	NA	False	AATAAA	-17	NA	9239148	8994331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
Isoform_185799_35	chr9	-	5899	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-1	-245	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGTGAAGAAGCAT	-2	True	NA	0	True	AATAAA	-21	NA	9239032	8994574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
Isoform_18580_49	chr11	-	3518	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	1	8	1	-8	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGAGTTGATCACACC	4307	False	NA	-5	True	AATAAA	-21	NA	120489190	120482954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
Isoform_185802_6	chr9	-	1984	17	NIC	ENSMUSG00000050730.18	novel	1868	16	NA	NA	-24	-10	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	7.44038809471656	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTTGTAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	9239130	9011248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
Isoform_185808_187	chr9	-	2522	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	0	1	0	0	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCTAACAAAGGCTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	13738403	13719090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
Isoform_185817_51	chr9	-	2417	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	-125	-30	27	0	multi-exon	FALSE	canonical	3	58	junction_3	63.5314639653475	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCTAACAAAGGCTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	13738376	13719090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
Isoform_18583_2187	chr11	-	1138	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	0	2389	0	-1	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	2187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGAGCTGTCTGGTCCAT	4306	False	NA	-8	True	AATAAA	-18	NA	120489191	120485335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
Isoform_185831_38	chr9	-	4225	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	230	15	-29	-15	multi-exon	FALSE	canonical	3	20	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTGGGCTATATG	NA	False	NA	-15	True	NA	NA	NA	14292308	14265300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_14269184_14291966
Isoform_185837_3	chr9	-	9093	15	NNC	ENSMUSG00000013076.18	novel	3046	14	NA	NA	-18047	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	4.0082822418852	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGGCTCCTCTTTTAC	205	False	NA	-3	True	AATAAA	-13	NA	14574399	14453265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14545197_14545249_14556215_14556343_14574164
Isoform_18584_132	chr11	-	1293	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-151	2385	-151	3	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTCTGGTCCATCCTG	4155	False	NA	-4	True	AATAAA	-22	NA	120489342	120485331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
Isoform_185840_8	chr9	-	3734	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	-1559	-422	-1	0	multi-exon	FALSE	canonical	3	189	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCAGTGTTTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	14695819	14691082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_14692908_14693910
Isoform_185842_15	chr9	-	2460	3	NIC	ENSMUSG00000031931.5	novel	2679	3	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	86.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCAGTGTTTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	14695821	14691081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_14692908_14693910_14694259_14695535
Isoform_185843_80	chr9	-	2239	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	1	-1203	1	1	multi-exon	FALSE	canonical	3	83	junction_2	53	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCAGTGTTTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	14695821	14691081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_14692908_14693910_14694259_14695756
Isoform_185845_6	chr9	-	2409	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	0	-1372	0	1	multi-exon	FALSE	canonical	3	83	junction_2	53	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTTCTTGTCAA	NA	False	NA	NA	False	NA	NA	NA	14695822	14690912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_14692908_14693910_14694259_14695756
Isoform_185846_74	chr9	-	2195	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	316	168	10	1	multi-exon	FALSE	canonical	3	72	junction_2	58.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCAGTGTTTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	14695836	14691081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_14692908_14693910_14694259_14695815
Isoform_185850_69	chr9	-	2093	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	-19	3658	-19	-1	multi-exon	FALSE	canonical	3	51	junction_1	8.13557004763649	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACACCCTCTGTGCCCTT	NA	False	NA	-5	True	AATAAA	-20	NA	14956793	14917081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
Isoform_185851_82	chr9	-	2059	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	15	3658	15	-1	multi-exon	FALSE	canonical	3	51	junction_1	8.13557004763649	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACACCCTCTGTGCCCTT	NA	False	NA	-5	True	AATAAA	-20	NA	14956759	14917081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
Isoform_185861_9	chr9	-	2981	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	5	978	5	678	multi-exon	TRUE	canonical	3	139	junction_7	15.3563726777577	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTGTGGATTATGTT	NA	False	NA	NA	False	AAAAAG	-14	NA	15191222	15172624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
Isoform_185864_25	chr9	-	2624	9	FSM	ENSMUSG00000031938.16	ENSMUST00000178977.9	2650	9	28	-2	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.64005494464026	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCTTTTCTTTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	15217435	15194632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217332
Isoform_185866_13	chr9	-	7554	28	FSM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	57	-6	57	1	multi-exon	TRUE	canonical	3	110	junction_2	25.4723282440542	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	9764	False	NA	1	True	AATAAA	-18	NA	15269027	15228209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
Isoform_185870_5	chr9	-	7340	27	FSM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	28	-180	28	0	multi-exon	FALSE	canonical	3	46	junction_7	32.7214575925683	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCTTTGCTGTCCATC	9735	False	NA	-2	True	AATAAA	-15	NA	15269056	15228212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
Isoform_185871_7	chr9	-	7492	28	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	57	7	intron_retention	FALSE	canonical	3	87	junction_6	27.9548921391772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTACTGTATATATT	9764	False	NA	-64	True	AATAAA	-45	NA	15269027	15228274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
Isoform_185872_7	chr9	-	7575	28	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	34	1	intron_retention	FALSE	canonical	3	87	junction_6	27.9548921391772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTCCTTTGCTGTCCA	9741	False	NA	-4	True	AATAAA	-13	NA	15269050	15228214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
Isoform_185873_12	chr9	-	7053	24	ISM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	31	5540	31	539	5prime_fragment	FALSE	canonical	3	121	junction_16	23.6825252830166	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGCCTCACTTCAGAC	9738	False	NA	-2	True	ATTAAA	-17	NA	15269053	15233755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
Isoform_185874_8	chr9	-	6808	23	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	34	5365	34	537	5prime_fragment	FALSE	canonical	3	46	junction_3	33.1414449277763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAAGCCTCACTTCAG	9741	False	NA	-4	True	ATTAAA	-15	NA	15269050	15233757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
Isoform_185877_4	chr9	-	6793	23	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	57	542	intron_retention	FALSE	canonical	3	46	junction_3	35.5783386601761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTCACTTCAGACACT	9764	False	NA	1	True	ATTAAA	-20	NA	15269027	15233752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
Isoform_185879_3	chr9	-	4138	5	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	28	-6	intron_retention	FALSE	canonical	3	132	junction_2	13.6473440639562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	9735	False	NA	NA	False	NA	NA	NA	15269056	15255963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_15258333_15262106_15262201_15262986_15264396_15265901_15266033_15268921
Isoform_185882_4	chr9	-	4702	7	FSM	ENSMUSG00000045519.16	ENSMUST00000068079.14	4751	7	53	-4	53	4	multi-exon	FALSE	canonical	1	1	junction_4	13.5113121330075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGTATTGACATTTT	NA	False	NA	NA	False	NA	NA	NA	20296420	20256427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20260456_20260876_20260960_20261827_20261909_20263133_20263261_20264048_20264138_20265359_20265546_20296312
Isoform_185883_5	chr9	-	604	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	71	-67	71	67	multi-exon	FALSE	canonical	3	31	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAACATCATTTCAACG	NA	False	NA	NA	False	NA	NA	NA	20296402	20263809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20264138_20265359_20265546_20296312
Isoform_185884_11	chr9	-	537	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	70	1	70	-1	multi-exon	FALSE	canonical	3	31	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTCTTGTCATATAT	NA	False	NA	NA	False	NA	NA	NA	20296403	20263877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20264138_20265359_20265546_20296312
Isoform_185885_18	chr9	-	6739	9	ISM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	303	4517	-30	2064	3prime_fragment	FALSE	canonical	3	62	junction_5	6.557438524302	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGAGTCTTGCTGTGTA	NA	False	NA	-2	True	AATAAA	-20	NA	20371153	20344261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842
Isoform_185887_5	chr9	-	6628	10	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-3	2062	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	19.3964487013015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGAGTCTTGCTGTG	NA	False	NA	-4	True	AATAAA	-18	NA	20371288	20344263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371201
Isoform_185891_23	chr9	-	6588	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	172	4516	1	2065	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	-1	True	AATAAA	-21	NA	20371284	20344260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
Isoform_185892_5	chr9	-	6766	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	-6	4516	-4	2065	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	-1	True	AATAAA	-21	NA	20371462	20344260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
Isoform_185893_3	chr9	-	6823	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	159	4294	-12	2287	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGATGGTTCCTTCG	NA	False	NA	NA	False	CATAAA	-23	NA	20371297	20344038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
Isoform_185895_5	chr9	-	3052	9	FSM	ENSMUSG00000059475.14	ENSMUST00000163348.8	2135	9	-16	-901	-12	-217	multi-exon	FALSE	canonical	2	5	junction_8	10.295630140987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTATGACTTTGCTGC	NA	False	NA	-6	True	NA	NA	NA	20404054	20380220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20382542_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681_20403748_20403993
Isoform_185897_15	chr9	-	3275	8	ISM	ENSMUSG00000059475.14	ENSMUST00000080386.13	2417	9	9	-621	-2	-218	intron_retention	FALSE	canonical	3	13	junction_7	7.74333156163866	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTATGACTTTGCTG	NA	False	NA	-7	True	NA	NA	NA	20404029	20380221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681
Isoform_185898_8	chr9	-	3034	9	FSM	ENSMUSG00000059475.14	ENSMUST00000080386.13	2417	9	3	-620	3	-219	multi-exon	FALSE	canonical	2	5	junction_8	9.71387538524146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTCTATGACTTTGCT	NA	False	NA	-8	True	NA	NA	NA	20404035	20380222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681_20403748_20403993
Isoform_185899_10	chr9	-	3188	7	FSM	ENSMUSG00000059475.14	ENSMUST00000115562.9	3557	7	-7	376	-7	-217	multi-exon	FALSE	canonical	2	5	junction_6	10.4309901522126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTATGACTTTGCTGC	NA	False	NA	-6	True	NA	NA	NA	20404049	20380220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20403681
Isoform_1859_5	chr10	-	801	2	FSM	ENSMUSG00000046031.8	ENSMUST00000062784.8	1094	2	292	1	292	-1	multi-exon	FALSE	canonical	3	41	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTTTCTCCCAAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	34003688	34002063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_34002563_34003386
Isoform_185900_4	chr9	-	2938	8	NIC	ENSMUSG00000059475.14	novel	2417	9	NA	NA	1	-213	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	11.6916156946344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGACTTTGCTGCATTA	NA	False	NA	-2	True	NA	NA	NA	20404041	20380216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20403681_20403748_20403993
Isoform_185901_3	chr9	-	3062	9	NNC	ENSMUSG00000059475.14	novel	2417	9	NA	NA	-9	-220	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	11.9889271830302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGTCTATGACTTTGC	NA	False	NA	-9	True	NA	NA	NA	20404051	20380223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397612_20397734_20403681_20403748_20403993
Isoform_185903_37	chr9	-	6276	9	FSM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	0	7	0	-7	multi-exon	FALSE	canonical	3	20	junction_8	12.7156399760295	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGTGTGTTAATGTT	NA	False	NA	NA	False	ATTAAA	-11	NA	20432713	20406370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
Isoform_185904_3	chr9	-	6480	9	FSM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	-205	8	-205	-8	multi-exon	FALSE	canonical	3	20	junction_8	12.7156399760295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432918	20406371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
Isoform_185905_16	chr9	-	6234	10	NNC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.6807858921673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGTGTGTTAATGTT	NA	False	NA	NA	False	ATTAAA	-11	NA	20432713	20406370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_20409183_20409213_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432650
Isoform_185906_6	chr9	-	6124	9	NNC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	11	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.721034968989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432693	20406371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_20409183_20409213_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432639
Isoform_185907_3	chr9	-	688	2	FSM	ENSMUSG00000060510.15	ENSMUST00000213275.2	679	2	-7	-2	0	2	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAT	NA	False	NA	NA	False	AATACA	-8	NA	20432713	20431801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20432416_20432639
Isoform_185908_84	chr9	-	1810	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	277	-1	-216	-1	multi-exon	TRUE	canonical	3	69	junction_2	12	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20553825	20549083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20550495_20553319_20553393_20553499
Isoform_185909_29	chr9	-	4057	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	-1970	-1	-9	-1	multi-exon	FALSE	canonical	3	69	junction_2	12	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20556072	20549083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20550495_20553319_20553393_20553499
Isoform_185910_30	chr9	-	1870	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	217	-1	217	-1	multi-exon	FALSE	canonical	3	69	junction_2	12	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20553885	20549083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20550495_20553319_20553393_20553499
Isoform_185913_5	chr9	-	3790	4	FSM	ENSMUSG00000066892.15	ENSMUST00000148631.8	3756	4	-36	2	-16	-1	multi-exon	FALSE	canonical	3	9	junction_3	35.3270434653114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20556079	20549083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20550495_20553319_20553393_20553499_20555595_20555868
Isoform_185914_172	chr9	-	2067	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	-10	-1	-10	-1	multi-exon	FALSE	canonical	3	47	junction_2	23	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20556073	20549083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20550495_20553319_20553393_20555490
Isoform_185916_15	chr9	-	1970	2	NIC	ENSMUSG00000066892.15	novel	2056	3	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556050	20549084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_20550495_20555490
Isoform_185917_4	chr9	-	2661	3	NNC	ENSMUSG00000066892.15	novel	2056	3	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_1	23	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556072	20549081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_20550495_20552726_20553393_20555490
Isoform_185918_5	chr9	-	2385	4	NNC	ENSMUSG00000066892.15	novel	761	4	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.0665559243899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20556072	20549083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_20550495_20552726_20553393_20555490_20555595_20555868
Isoform_185920_38	chr9	-	1784	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	106	5	106	-2	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGGTGCCTGGGTTGTT	NA	False	NA	-8	True	AATAAA	-13	NA	20657539	20578993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
Isoform_185921_11	chr9	-	1869	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	21	5	21	-2	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGGTGCCTGGGTTGTT	NA	False	NA	-8	True	AATAAA	-13	NA	20657624	20578993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
Isoform_185922_5	chr9	-	6068	67	FSM	ENSMUSG00000004098.8	ENSMUST00000004201.8	6119	67	44	7	44	-7	multi-exon	TRUE	canonical	1	1	junction_62	3.84063264799209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTTCTCTTTTTCTCT	1647	False	NA	-9	True	AATAAA	-14	NA	20726319	20681352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20682275_20682366_20682607_20682882_20682952_20683403_20683517_20683600_20683800_20684380_20684435_20685189_20685226_20685309_20685364_20685611_20685720_20685856_20685911_20686326_20686381_20686528_20686637_20686761_20686816_20687129_20687184_20687387_20687442_20687608_20687663_20688287_20688396_20689772_20689827_20689960_20690015_20690096_20690151_20690311_20690366_20691196_20691305_20693103_20693158_20693782_20693837_20693920_20694029_20694779_20694888_20695964_20696019_20696441_20696532_20696668_20696777_20696868_20696923_20697494_20697549_20697646_20697701_20698385_20698431_20698556_20698611_20698826_20698872_20699846_20699901_20703940_20703995_20704805_20704914_20705006_20705061_20705242_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331_20710386_20710555_20710610_20710704_20710759_20711538_20711593_20712363_20712418_20712511_20712569_20713062_20713147_20713239_20713315_20713753_20713817_20714302_20714345_20714415_20714464_20715932_20716074_20716165_20716280_20718900_20719051_20719655_20719761_20720735_20720893_20720960_20721151_20721235_20721398_20726161
Isoform_185923_4	chr9	-	2276	28	ISM	ENSMUSG00000004098.8	ENSMUST00000145974.2	3927	42	12	11166	12	-11166	5prime_fragment	FALSE	canonical	1	1	junction_23	3.76832513836353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAGAAAGGGTGAGGA	1615	False	NA	NA	False	NA	NA	NA	20726351	20705255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331_20710386_20710555_20710610_20710704_20710759_20711538_20711593_20712363_20712418_20712511_20712569_20713062_20713147_20713239_20713315_20713753_20713817_20714302_20714345_20714415_20714464_20715932_20716074_20716165_20716280_20718900_20719051_20719655_20719761_20720735_20720893_20720960_20721151_20721235_20721398_20726161
Isoform_185924_21	chr9	-	2215	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1845	0	1845	0	3prime_fragment	FALSE	canonical	3	97	junction_3	15.9652400197707	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789178	20785103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687
Isoform_185925_3	chr9	-	2345	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1713	2	1713	-2	3prime_fragment	FALSE	canonical	3	97	junction_3	15.9652400197707	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACTGTGTCTGTCTTCCT	NA	False	NA	-7	True	NA	NA	NA	20789310	20785105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687
Isoform_18593_9	chr11	-	2047	14	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	107.105710100324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508745	120500913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_185930_15	chr9	-	1100	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1481	0	1481	0	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789542	20785103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
Isoform_185931_9	chr9	-	1241	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1340	0	1340	0	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789683	20785103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
Isoform_185932_4	chr9	-	1501	5	NNC	ENSMUSG00000038742.8	novel	1582	6	NA	NA	1845	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	45.3176290200624	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTTCCTGTGTG	NA	False	NA	-2	True	NA	NA	NA	20789178	20785100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20788582
Isoform_185941_43	chr9	-	1406	9	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	23	1	6	-1	intron_retention	FALSE	canonical	3	2349	junction_1	159.342398626354	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5162	False	NA	-2	True	AGTAAA	-15	NA	20809896	20805645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379
Isoform_185946_2351	chr9	-	1078	11	FSM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	23	0	6	0	multi-exon	FALSE	canonical	3	2112	junction_10	212.212370044727	2351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5162	False	NA	-1	True	AGTAAA	-16	NA	20809896	20805644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
Isoform_18595_248	chr11	-	1813	14	FSM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	68	0	1	0	multi-exon	FALSE	canonical	3	184	junction_7	79.5574296680368	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508694	120500912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_18596_152	chr11	-	1759	13	FSM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	57	-330	1	0	multi-exon	FALSE	canonical	3	99	junction_7	91.5034911295131	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508694	120500912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_18597_64	chr11	-	2438	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	22	intron_retention	FALSE	canonical	3	48	junction_6	110.81174601799	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAACTGGAACCGGTCC	NA	False	NA	16	True	AATAAA	-38	NA	120508734	120500890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_18598_29	chr11	-	2192	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	184	junction_6	81.3758000472704	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508694	120500912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_18599_9	chr11	-	2209	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	99	junction_6	93.9507520015295	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508765	120500912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_18601_45	chr11	-	2664	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	1	3	intron_retention	FALSE	canonical	3	226	junction_6	61.2106510474516	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCTCCCGACCCCGGG	NA	False	NA	-3	True	AATAAA	-19	NA	120508735	120500909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_186011_617	chr9	-	5230	39	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	490	junction_35	108.724460496474	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864141	20818504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
Isoform_186012_289	chr9	-	5255	39	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	3	490	junction_35	108.724460496474	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864167	20818505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
Isoform_186020_463	chr9	-	5259	39	FSM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	108	0	-26	0	multi-exon	FALSE	canonical	3	422	junction_35	116.269340570878	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864167	20818504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
Isoform_186031_14	chr9	-	2955	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	-151	3590	-151	2298	multi-exon	FALSE	canonical	3	250	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGGTTATGTGTGTGT	7943	False	NA	0	True	AATAAA	-20	NA	20888228	20877246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20879867_20887893
Isoform_186032_469	chr9	-	2760	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	43	3591	-29	2297	multi-exon	FALSE	canonical	3	250	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGGTTATGTGTGTG	8137	False	NA	-1	True	AATAAA	-19	NA	20888034	20877247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20879867_20887893
Isoform_186033_275	chr9	-	2792	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	11	3591	11	2297	multi-exon	FALSE	canonical	3	250	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGGTTATGTGTGTG	8105	False	NA	-1	True	AATAAA	-19	NA	20888066	20877247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20879867_20887893
Isoform_186036_14	chr9	-	2487	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	-35	3942	-35	1946	multi-exon	FALSE	canonical	3	250	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATATGTGTCTGTGTGTC	8059	False	NA	NA	False	AATAGA	-26	NA	20888112	20877598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20879867_20887893
Isoform_186041_6	chr9	-	1110	5	FSM	ENSMUSG00000079681.4	ENSMUST00000115494.3	1010	5	-106	6	-106	-4	multi-exon	FALSE	canonical	3	10	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGATTATTTTTAATTA	815	False	NA	NA	False	AATAAA	-15	NA	20978495	20973694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20974014_20974189_20974284_20974609_20974693_20977319_20977674_20978235
Isoform_186043_8	chr9	-	942	3	FSM	ENSMUSG00000079677.3	ENSMUST00000216484.2	633	3	1	-310	1	1	multi-exon	FALSE	canonical	3	331	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984817	20978814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20979222_20979325_20979414_20984370
Isoform_186044_16	chr9	-	853	4	FSM	ENSMUSG00000079677.3	ENSMUST00000217150.2	951	4	100	-2	-8	1	multi-exon	FALSE	canonical	3	216	junction_3	55.4276304943863	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984810	20978814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559
Isoform_186046_158	chr9	-	800	5	FSM	ENSMUSG00000079677.3	ENSMUST00000010348.7	812	5	13	-1	-9	1	multi-exon	FALSE	canonical	3	216	junction_3	56.6171352154098	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984827	20978814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20984684
Isoform_186049_11	chr9	-	735	4	NIC	ENSMUSG00000079677.3	novel	812	5	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_3	142.14312036348	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984817	20978814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_20979222_20979325_20979414_20984370_20984478_20984684
Isoform_186051_37	chr9	-	872	4	FSM	ENSMUSG00000079677.3	ENSMUST00000215631.2	681	4	-15	-176	1	1	multi-exon	FALSE	canonical	3	225	junction_3	51.1881062574327	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984817	20978814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20979222_20979325_20979414_20984370_20984615_20984684
Isoform_186057_82	chr9	-	3446	13	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	-10	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	131.926642073877	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21003293	20985463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991465_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
Isoform_18606_15	chr11	-	2696	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	14	-1	intron_retention	FALSE	canonical	3	48	junction_5	115.688024480775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508720	120500913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_186064_817	chr9	-	3449	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	11	10	11	-10	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21003293	20985463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
Isoform_186067_12	chr9	-	3507	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	-47	10	-47	-10	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21003351	20985463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
Isoform_186075_16	chr9	-	3538	12	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	-9	intron_retention	FALSE	canonical	3	416	junction_6	40.55034621939	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGAGCTGGC	NA	False	NA	-11	True	ATTAAA	-22	NA	21003293	20985462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
Isoform_18608_10	chr11	-	2473	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	99	junction_5	98.1063198779773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508734	120500912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_186082_65	chr9	-	4740	25	FSM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	31	-1	20	0	multi-exon	FALSE	canonical	3	60	junction_24	14.2647949512077	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	-3	True	NA	NA	NA	21042508	21015364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
Isoform_186083_44	chr9	-	4799	25	FSM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	-27	-2	-27	0	multi-exon	FALSE	canonical	3	60	junction_24	14.2647949512077	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21042566	21015363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
Isoform_186084_9	chr9	-	4771	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_24	21.7934989669448	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21042464	21015365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042391
Isoform_186085_3	chr9	-	4778	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_24	21.4737808475566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21042462	21015365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042382
Isoform_186086_4	chr9	-	4591	24	NIC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_20	21.1438497405877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	-3	True	NA	NA	NA	21042507	21015364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21036159_21036278_21038419_21038640_21039855_21040008_21042467
Isoform_186087_13	chr9	-	1946	8	ISM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	2531	15773	-1366	3616	internal_fragment	FALSE	canonical	3	64	junction_4	17.9193203223874	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	21040008	21031138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855
Isoform_186088_5	chr9	-	2046	9	ISM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	-29	15773	-29	3616	5prime_fragment	FALSE	canonical	3	60	junction_8	19.0591185525459	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	21042568	21031138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
Isoform_186089_3	chr9	-	2031	7	NIC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-1366	3616	intron_retention	FALSE	canonical	3	64	junction_3	19.2959408512084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	21040008	21031138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855
Isoform_18609_16	chr11	-	2959	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	226	junction_5	62.8630256987365	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508738	120500912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_186091_5	chr9	-	1636	5	FSM	ENSMUSG00000032175.12	ENSMUST00000214864.2	1662	5	27	-1	16	1	multi-exon	FALSE	canonical	3	60	junction_4	20.5106679559687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCCTTACTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	21042512	21034753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
Isoform_186100_2632	chr9	-	1619	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	21	6211	-19	1520	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	2632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCGCTGGTTCAGTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	21061257	21050728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
Isoform_186101_68	chr9	-	2489	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	44	5318	4	2413	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTTGCCTAGCATTCA	NA	False	NA	-15	True	ATTAAA	-15	NA	21061234	21049835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
Isoform_186105_115	chr9	-	1769	8	NIC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	-20	1522	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	586.784875227641	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	21061258	21050726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053974_21054242_21054522_21061051
Isoform_18611_7	chr11	-	766	3	FSM	ENSMUSG00000025137.16	ENSMUST00000126148.2	513	3	-7	-246	-4	246	multi-exon	FALSE	canonical	3	395	junction_2	25	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	120508743	120505755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120506279_120506674_120506764_120508589
Isoform_186117_8	chr9	-	3953	5	FSM	ENSMUSG00000003308.16	ENSMUST00000164812.8	3614	5	-3	-336	-3	0	multi-exon	FALSE	canonical	3	121	junction_3	9.14808723176599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	0	True	AATAAA	-17	NA	21150112	21141026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366
Isoform_186118_10	chr9	-	3627	5	FSM	ENSMUSG00000003308.16	ENSMUST00000164812.8	3614	5	-12	-1	-12	1	multi-exon	FALSE	canonical	3	121	junction_3	9.14808723176599	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGTCTATTGTCTCTGC	NA	False	NA	-8	True	AATACA	-29	NA	21150121	21141361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366
Isoform_18612_14	chr11	-	1838	11	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_2	26.3286915740224	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515809	120509197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120509876_120509974_120510117_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
Isoform_186120_46	chr9	-	2582	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	255	335	-3	1	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGTCTATTGTCTCTGC	NA	False	NA	-8	True	AATACA	-29	NA	21150112	21141361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
Isoform_186121_49	chr9	-	2020	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	252	900	-6	2	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150115	21141926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
Isoform_186123_7	chr9	-	2292	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	-20	900	-12	2	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150387	21141926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
Isoform_186126_30	chr9	-	2941	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	231	0	-27	0	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	0	True	AATAAA	-17	NA	21150136	21141026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
Isoform_186128_8	chr9	-	3088	6	FSM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	-23	-902	-23	0	multi-exon	FALSE	canonical	3	10	junction_5	50.5663920010119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	0	True	AATAAA	-17	NA	21150398	21141026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150203
Isoform_18613_3	chr11	-	2854	9	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	-1	0	intron_retention	FALSE	canonical	2	9	junction_1	22.3047080231955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515811	120509197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120509876_120509974_120511096_120511249_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
Isoform_186130_9	chr9	-	2728	6	FSM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	1	-566	1	0	multi-exon	FALSE	canonical	3	10	junction_5	50.5663920010119	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGTCTATTGTCTCTG	NA	False	NA	-9	True	AATACA	-28	NA	21150374	21141362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150203
Isoform_186134_13	chr9	-	2813	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	2	336	2	1	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGTCTATTGTCTCTGC	NA	False	NA	-8	True	AATACA	-29	NA	21150626	21141361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_186136_27	chr9	-	2210	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	40	901	40	2	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150588	21141926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_18614_12	chr11	-	1762	9	ISM	ENSMUSG00000025138.15	ENSMUST00000080202.12	1727	10	31	0	1	0	intron_retention	FALSE	canonical	2	56	junction_8	11.0113577727726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515809	120509197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498
Isoform_186140_10	chr9	-	3095	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	52	4	52	-3	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTGTGGCTCTGAATTA	NA	False	NA	-3	True	AATAAA	-14	NA	21150576	21141029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_186144_7	chr9	-	966	3	NIC	ENSMUSG00000003308.16	novel	317	2	NA	NA	-27	38	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	25	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGTATACATGTA	NA	False	NA	NA	False	AAAAAG	-11	NA	21150136	21147380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21147613_21148366_21149053_21150088
Isoform_18615_75	chr11	-	1699	10	FSM	ENSMUSG00000025138.15	ENSMUST00000080202.12	1727	10	28	0	-2	0	multi-exon	FALSE	canonical	2	54	junction_9	11.3376897945103	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515812	120509197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
Isoform_186153_289	chr9	-	2581	19	FSM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	12	5	-1	-5	multi-exon	FALSE	canonical	3	91	junction_10	26.4070697604511	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTTTCCCCATCCCT	NA	False	NA	-14	True	AATAAA	-14	NA	21199253	21184757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
Isoform_186156_4	chr9	-	2675	18	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	91	junction_10	26.8261092670612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTTTCCCCATCCCT	NA	False	NA	-14	True	AATAAA	-14	NA	21199272	21184757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
Isoform_186157_14	chr9	-	2789	17	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	0	-5	intron_retention	TRUE	canonical	3	91	junction_10	27.6433055865249	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTTTCCCCATCCCT	NA	False	NA	-14	True	AATAAA	-14	NA	21199249	21184757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
Isoform_186158_4	chr9	-	2701	18	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	91	junction_9	26.9681344704562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTTTCCCCATCCCT	NA	False	NA	-14	True	AATAAA	-14	NA	21199270	21184757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
Isoform_186159_4	chr9	-	1948	9	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-5	1	intron_retention	FALSE	canonical	3	91	junction_2	11.0446536840229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	21199270	21190247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21190828_21191459_21191786_21192337_21192466_21192957_21193036_21193110_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
Isoform_186161_3	chr9	-	1263	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	168	-8	13	8	multi-exon	FALSE	canonical	3	236	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGATTTAGGAGTCTGGA	NA	False	NA	NA	False	ATTAAA	-20	NA	21202436	21199697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21200629_21202104
Isoform_186162_174	chr9	-	1180	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	188	55	33	1	multi-exon	FALSE	canonical	3	236	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGTTTTGTGTGAT	NA	False	NA	NA	False	TATAAA	-19	NA	21202416	21199760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21200629_21202104
Isoform_186165_39	chr9	-	1207	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	161	55	6	1	multi-exon	FALSE	canonical	3	236	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGTTTTGTGTGAT	NA	False	NA	NA	False	TATAAA	-19	NA	21202443	21199760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21200629_21202104
Isoform_186170_5	chr9	-	1730	11	FSM	ENSMUSG00000003309.15	ENSMUST00000115433.11	2586	11	11	845	-10	3	multi-exon	FALSE	canonical	2	2	junction_6	7.33552997403732	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGTGCTTCTTGGGT	1330	False	NA	-1	True	ATTAAA	-15	NA	21223622	21206753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214068_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
Isoform_186173_879	chr9	-	1308	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	69	1	4	-1	multi-exon	FALSE	canonical	3	533	junction_2	14.8548533034381	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGCCTGGTGACTGGGC	NA	False	NA	-6	True	AATAAA	-18	NA	21421479	21418851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
Isoform_186175_41	chr9	-	1273	4	FSM	ENSMUSG00000032180.12	ENSMUST00000214576.2	1013	4	51	-311	4	-1	multi-exon	FALSE	canonical	3	33	junction_2	250.551835399827	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGCCTGGTGACTGGGC	NA	False	NA	-6	True	AATAAA	-18	NA	21421479	21418851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21419688_21420226_21420411_21420584_21420648_21421289
Isoform_186176_10	chr9	-	1209	3	FSM	ENSMUSG00000032180.12	ENSMUST00000214285.2	1213	3	5	-1	5	-1	multi-exon	FALSE	canonical	2	30	junction_2	267.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGCCTGGTGACTGGGC	NA	False	NA	-6	True	AATAAA	-18	NA	21421478	21418851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21419688_21420226_21420411_21421289
Isoform_186177_28	chr9	-	1446	3	FSM	ENSMUSG00000032180.12	ENSMUST00000213316.2	1454	3	4	4	4	0	multi-exon	FALSE	canonical	3	564	junction_2	0.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCCTGGTGACTGGG	NA	False	NA	-7	True	AATAAA	-17	NA	21421479	21418852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21419688_21420226_21420648_21421289
Isoform_186179_27	chr9	-	2010	9	ISM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	36	-4	36	4	3prime_fragment	FALSE	canonical	3	66	junction_4	11.9032558571174	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCCATGGTGACCATGTG	6160	False	NA	-12	True	AATAAA	-21	NA	21504032	21499973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
Isoform_18618_3	chr11	-	1846	9	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	-1	0	intron_retention	FALSE	canonical	2	54	junction_8	11.7260393995586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515817	120509197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120509876_120510988_120511096_120511249_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
Isoform_186181_5	chr9	-	1281	9	ISM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	10	751	10	-747	intron_retention	FALSE	canonical	3	66	junction_4	11.9032558571174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGATCCAGAGAATTT	6134	False	NA	NA	False	NA	NA	NA	21504058	21500728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
Isoform_186182_21	chr9	-	1899	10	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	10	5	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	17.7478915457862	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCATGGTGACCATGTGG	6134	False	NA	-11	True	AATAAA	-22	NA	21504058	21499972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
Isoform_186185_22	chr9	-	1895	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	-2	1	-2	-1	multi-exon	FALSE	canonical	3	27	junction_9	21.338541031039	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCACGCCCATGGTGACC	6122	False	NA	-17	True	AATAAA	-16	NA	21504070	21499978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
Isoform_186186_9	chr9	-	1918	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	-24	0	14	0	multi-exon	FALSE	canonical	3	27	junction_9	21.338541031039	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGCCCATGGTGACCA	6100	False	NA	-16	True	AATAAA	-17	NA	21504092	21499977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
Isoform_186189_13	chr9	-	2102	8	FSM	ENSMUSG00000032182.16	ENSMUST00000034700.15	2174	8	80	-8	24	8	multi-exon	FALSE	canonical	3	66	junction_3	11.8062591493682	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGACCATGTGGCCT	6148	False	NA	-8	True	AATAAA	-25	NA	21504044	21499969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
Isoform_18619_6	chr11	-	1921	8	FSM	ENSMUSG00000025138.15	ENSMUST00000133625.8	1925	8	6	-2	-1	0	multi-exon	FALSE	canonical	2	54	junction_7	11.9965981572669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515819	120509197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120509876_120510988_120511096_120511249_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
Isoform_186190_16	chr9	-	1977	9	FSM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	48	-11	10	7	multi-exon	FALSE	canonical	3	41	junction_8	18.6463803457937	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTGACCATGTGGCC	6134	False	NA	-9	True	AATAAA	-24	NA	21504058	21499970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
Isoform_186197_417	chr9	-	694	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	15	657	-6	3	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCATTGATTTATCTACT	NA	False	NA	-17	True	ATTAAA	-17	NA	21671584	21667394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
Isoform_186203_105	chr9	-	1369	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671602	21666737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
Isoform_186204_224	chr9	-	1343	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	23	0	2	0	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671576	21666737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
Isoform_186207_25	chr9	-	582	5	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-3	6	combination_of_known_junctions	FALSE	canonical	3	158	junction_4	926.927552454883	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGATTTATCTACTTGC	NA	False	NA	-14	True	ATTAAA	-20	NA	21671602	21667391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671547
Isoform_186210_23	chr9	-	1243	5	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	158	junction_4	926.927552454883	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTGTGTGCAGC	NA	False	NA	NA	False	NA	NA	NA	21671608	21666736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671547
Isoform_186211_24	chr9	-	608	4	FSM	ENSMUSG00000074476.7	ENSMUST00000216057.2	627	4	21	-2	0	0	multi-exon	FALSE	canonical	3	69	junction_1	994.029174622154	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTTCATTGATTTATCT	NA	False	NA	-20	True	ATTAAA	-14	NA	21671578	21667397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21667592_21668585_21668691_21668980_21669126_21671414
Isoform_186212_15	chr9	-	691	4	NNC	ENSMUSG00000074476.7	novel	627	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	1006.10679795382	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTTCATTGATTTATCT	NA	False	NA	-20	True	ATTAAA	-14	NA	21671602	21667397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21667592_21668526_21668691_21668980_21669126_21671414
Isoform_186213_14	chr9	-	1511	4	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1938	junction_3	181.336397032942	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTTCATTGATTTATCT	NA	False	NA	-20	True	ATTAAA	-14	NA	21671583	21667397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21668490_21668585_21668691_21668980_21669126_21671414
Isoform_186218_12	chr9	-	2336	2	ISM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	28868	8	28627	-8	3prime_fragment	FALSE	canonical	3	484	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACATTGCCTCGTG	NA	False	NA	-20	True	AATAAA	-7	NA	21681172	21678087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21680301_21681049
Isoform_186247_48	chr9	-	4751	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	2306	-9	at_least_one_novel_splicesite	TRUE	non_canonical	3	203	junction_1	71.5494396487463	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21707493	21678088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21678614_21678633_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375
Isoform_186249_218	chr9	-	5029	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	2	9	2	-9	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21710038	21678088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
Isoform_186252_518	chr9	-	4813	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	219	8	1	-8	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACATTGCCTCGTG	NA	False	NA	-20	True	AATAAA	-7	NA	21709821	21678087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
Isoform_186282_12	chr9	-	6535	50	NIC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	27	junction_27	45.6108432419436	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6279	False	NA	NA	False	TTTAAA	-16	NA	21763908	21711477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_186284_45	chr9	-	6439	49	NIC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	53	junction_27	42.5310701379983	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTGGTGTGCTGACA	6271	False	NA	NA	False	TTTAAA	-17	NA	21763916	21711476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_186286_3	chr9	-	5216	39	NIC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-6046	-1	combination_of_known_junctions	FALSE	canonical	1	57	junction_26	43.1343966839148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTGGTGTGCTGACA	9338	False	NA	NA	False	TTTAAA	-17	NA	21750969	21711476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920
Isoform_186290_3	chr9	-	3609	24	NIC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-6630	-2	intron_retention	FALSE	canonical	3	129	junction_21	38.4401432421417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21735841	21711477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692
Isoform_186291_3	chr9	-	4041	25	NIC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	-4	0	intron_retention	FALSE	canonical	3	57	junction_2	38.4504551338472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTGCTGCTGCTTT	6269	False	NA	NA	False	NA	NA	NA	21763918	21734739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_186292_11	chr9	-	3903	22	ISM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	-4	4811	-4	-4811	5prime_fragment	FALSE	canonical	3	152	junction_8	19.8113552266968	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	6269	False	NA	NA	False	NA	NA	NA	21763918	21740352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_186293_97	chr9	-	3043	22	ISM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	-2	5669	-2	-5669	5prime_fragment	FALSE	canonical	3	152	junction_8	19.8113552266968	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTTATGTGTACATCT	6271	False	NA	NA	False	NA	NA	NA	21763916	21741210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_186295_3	chr9	-	3495	20	NIC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	-4	-4955	intron_retention	FALSE	canonical	0	0	junction_19	43.7592253827028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAAGGGCCGGGTGTGG	6269	False	NA	NA	False	NA	NA	NA	21763918	21740496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21763840
Isoform_186296_62	chr9	-	1870	15	FSM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	1	-3	1	3	multi-exon	FALSE	canonical	3	13	junction_1	50.5494807094989	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCCTCTGTTCTCTTTT	6276	False	NA	-3	True	NA	NA	NA	21763911	21748641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21748848_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_186297_12	chr9	-	2150	15	NNC	ENSMUSG00000032198.10	novel	1324	6	NA	NA	-2	-893	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.6599269017583	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGGCTCCTACCTTTTT	6271	False	NA	NA	False	NA	NA	NA	21763916	21749537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21749580_21749607_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_186299_71	chr9	-	2258	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	44	1533	-9	-382	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTATGTTCTTAAGATT	2277	False	NA	-6	True	ATTAAA	-15	NA	21829444	21820319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
Isoform_186302_15	chr9	-	3791	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	43	1	-10	-1	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGTATATTGCTTAATT	2276	False	NA	NA	False	AATAAA	-24	NA	21829445	21818787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
Isoform_186303_4	chr9	-	4067	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	44	-276	-9	276	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGAATGGGTTTATTT	2277	False	NA	NA	False	NA	NA	NA	21829444	21818510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
Isoform_186304_6	chr9	-	1652	3	ISM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	68	-1	68	0	intron_retention	FALSE	canonical	3	227	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCATGGTCATTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	21838690	21832303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21832646_21837286_21837451_21837544
Isoform_186305_4	chr9	-	1294	4	FSM	ENSMUSG00000040883.19	ENSMUST00000214569.2	879	4	-331	-84	-66	0	multi-exon	FALSE	canonical	3	12	junction_3	104.295520304352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	21838650	21832304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21837970
Isoform_186306_44	chr9	-	715	4	FSM	ENSMUSG00000040883.19	ENSMUST00000238930.2	862	4	148	-1	75	0	multi-exon	FALSE	canonical	3	48	junction_3	87.3473271231327	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	21838683	21832304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838582
Isoform_186307_60	chr9	-	708	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	75	2	75	-1	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGCCATGGTCATTTT	NA	False	NA	-8	True	AATAAA	-11	NA	21838683	21832306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
Isoform_186308_76	chr9	-	682	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	105	-2	-69	1	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCATGGTCATTTTTTTC	NA	False	NA	-4	True	AATAAA	-15	NA	21838653	21832302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
Isoform_186309_9	chr9	-	856	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	-73	2	0	-1	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGCCATGGTCATTTT	NA	False	NA	-8	True	AATAAA	-11	NA	21838831	21832306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
Isoform_186310_3	chr9	-	644	4	NNC	ENSMUSG00000040883.19	novel	785	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	108.533660933167	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	21838854	21832304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21832646_21837286_21837451_21837544_21837654_21838824
Isoform_186311_5	chr9	-	1790	7	ISM	ENSMUSG00000006235.7	ENSMUST00000006397.7	1761	8	943	8	1	-8	3prime_fragment	FALSE	canonical	3	6	junction_3	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGACTTTGTCTTATT	NA	False	NA	NA	False	NA	NA	NA	21873859	21870200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21870967_21871056_21871145_21871819_21871908_21871985_21872140_21872743_21872902_21872986_21873163_21873499
Isoform_186312_3	chr9	-	1785	13	ISM	ENSMUSG00000040146.10	ENSMUST00000045726.8	2543	19	7865	2	-4160	-1	3prime_fragment	FALSE	canonical	0	0	junction_3	2.12622513702885	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCGGTCACATCCTAAC	NA	False	NA	NA	False	NA	NA	NA	21892877	21882824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21883306_21885317_21885433_21885683_21885837_21886903_21887004_21887087_21887157_21887245_21887342_21888034_21888157_21888240_21888274_21888485_21888573_21888677_21888726_21891797_21891883_21891979_21892084_21892585
Isoform_186313_6	chr9	-	2195	13	FSM	ENSMUSG00000039632.14	ENSMUST00000044926.6	2197	13	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_6	2.13924960883224	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTATTCACCTCT	4204	False	NA	NA	False	AATAAA	-14	NA	21913930	21901168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21901541_21901692_21901778_21902097_21902254_21902903_21903061_21903143_21903305_21904167_21904321_21904833_21904957_21906108_21906235_21906322_21906425_21906503_21906675_21909181_21909260_21909340_21909463_21913541
Isoform_186314_8	chr9	-	2001	7	FSM	ENSMUSG00000003410.9	ENSMUST00000003501.9	5014	7	-13	3026	0	-1570	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	280	False	NA	NA	False	NA	NA	NA	21963319	21929326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21930151_21935969_21936009_21937468_21937695_21937803_21937958_21947607_21947712_21947936_21948157_21962885
Isoform_186315_7	chr9	-	2132	9	FSM	ENSMUSG00000038895.17	ENSMUST00000043922.7	2108	9	-24	0	7	0	multi-exon	FALSE	canonical	3	20	junction_5	12.3129758791285	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9433	False	NA	-1	True	ATTAAA	-22	NA	21982665	21966755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968975_21969099_21969712_21976996_21977213_21979443_21979488_21982344
Isoform_186317_23	chr9	-	2182	9	FSM	ENSMUSG00000038895.17	ENSMUST00000179605.9	1888	9	-54	-240	-19	0	multi-exon	FALSE	canonical	3	19	junction_5	12.5299640861417	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9407	False	NA	-1	True	ATTAAA	-22	NA	21982691	21966755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968999_21969099_21969712_21976996_21977213_21979443_21979488_21982344
Isoform_186318_6	chr9	-	2298	8	NIC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	-34	0	intron_retention	FALSE	canonical	3	32	junction_7	10.0203873810001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9392	False	NA	-1	True	ATTAAA	-22	NA	21982706	21966755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21969712_21976996_21977213_21979443_21979488_21982344
Isoform_186319_3	chr9	-	2607	7	FSM	ENSMUSG00000038895.17	ENSMUST00000216916.2	2534	7	-121	48	-21	1	multi-exon	FALSE	canonical	3	32	junction_6	10.2102889283311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGCCTGGATAATTGTG	9405	False	NA	0	True	ATTAAA	-23	NA	21982693	21966754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21967190_21967288_21967825_21968582_21968695_21968796_21969712_21976996_21977213_21979443_21979488_21982344
Isoform_186322_146	chr9	-	1654	9	FSM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	19	0	-6	0	multi-exon	TRUE	canonical	3	105	junction_8	44.5222907654132	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5915	False	NA	-9	True	AATAAA	-15	NA	21996704	21983541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996644
Isoform_186323_145	chr9	-	1655	9	FSM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	21	0	10	0	multi-exon	FALSE	canonical	3	90	junction_8	49.2772767104677	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5906	False	NA	-9	True	AATAAA	-15	NA	21996713	21983541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
Isoform_186324_17	chr9	-	1477	8	FSM	ENSMUSG00000066839.13	ENSMUST00000179422.8	1462	8	-15	0	10	0	multi-exon	FALSE	canonical	3	16	junction_7	78.0418516710419	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5906	False	NA	-9	True	AATAAA	-15	NA	21996713	21983541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996644
Isoform_186325_16	chr9	-	1479	8	NIC	ENSMUSG00000066839.13	novel	1673	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_7	80.1136947196461	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5896	False	NA	-9	True	AATAAA	-15	NA	21996723	21983541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996652
Isoform_186326_6	chr9	-	1545	8	NIC	ENSMUSG00000066839.13	novel	1673	9	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_6	84.8771020298148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5906	False	NA	-9	True	AATAAA	-15	NA	21996713	21983541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21995318_21995505_21996644
Isoform_186327_5	chr9	-	1546	8	NIC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_6	87.0528809496426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5897	False	NA	-9	True	AATAAA	-15	NA	21996722	21983541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21995318_21995505_21996652
Isoform_186329_4	chr9	-	1705	10	NNC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.9437917838584	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5906	False	NA	-9	True	AATAAA	-15	NA	21996713	21983541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21983877_21984096_21984147_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
Isoform_186334_7	chr9	-	1310	3	FSM	ENSMUSG00000013822.8	ENSMUST00000213233.2	810	3	-53	-447	-16	0	multi-exon	FALSE	canonical	1	3	junction_2	229.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCCGCTGTACTTCTT	7977	False	NA	-8	True	AATAAA	-15	NA	22028435	22024286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22024976_22025103_22025240_22027950
Isoform_186336_421	chr9	-	860	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	28	0	-21	0	multi-exon	FALSE	canonical	3	357	junction_2	52.5	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCCGCTGTACTTCTT	7972	False	NA	-8	True	AATAAA	-15	NA	22028440	22024286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22024976_22025103_22025240_22028405
Isoform_186339_4	chr9	-	3659	3	ISM	ENSMUSG00000001348.16	ENSMUST00000217643.2	1447	6	-478	-9	-478	2	intron_retention	FALSE	canonical	3	251	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTGTGTCATCAAGGT	8418	False	NA	-21	True	AATAAA	-19	NA	22043605	22038024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_22038559_22038970_22039317_22040826
Isoform_186340_5	chr9	-	2053	5	FSM	ENSMUSG00000001348.16	ENSMUST00000115315.3	1349	5	-701	-3	354	-1	multi-exon	FALSE	canonical	3	21	junction_4	98.7734149455206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTCATCAAGGTT	9428	False	NA	-20	True	AATAAA	-20	NA	22042595	22038023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818
Isoform_186342_22	chr9	-	1427	5	FSM	ENSMUSG00000001348.16	ENSMUST00000115315.3	1349	5	-75	-3	-75	-1	multi-exon	FALSE	canonical	3	21	junction_4	98.7734149455206	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTCATCAAGGTT	10004	False	NA	-20	True	AATAAA	-20	NA	22041969	22038023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818
Isoform_186343_4	chr9	-	1492	6	FSM	ENSMUSG00000001348.16	ENSMUST00000217643.2	1447	6	-34	-11	-34	0	multi-exon	TRUE	canonical	2	3	junction_5	116.082039954508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	8862	False	NA	-19	True	AATAAA	-21	NA	22043161	22038022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818_22041905_22043032
Isoform_186344_46	chr9	-	1424	5	FSM	ENSMUSG00000001348.16	ENSMUST00000213815.2	1419	5	5	-10	5	-1	multi-exon	FALSE	canonical	3	35	junction_4	92.7425873048623	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTCATCAAGGTT	9079	False	NA	-20	True	AATAAA	-20	NA	22042944	22038023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042796
Isoform_186346_178	chr9	-	1404	5	FSM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	-49	1	-33	-1	multi-exon	FALSE	canonical	3	129	junction_4	52.4374627532645	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTCATCAAGGTT	8863	False	NA	-20	True	AATAAA	-20	NA	22043160	22038023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032
Isoform_186348_75	chr9	-	1336	5	NNC	ENSMUSG00000001348.16	novel	1419	5	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	83.7048385698222	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTCATCAAGGTT	9078	False	NA	-20	True	AATAAA	-20	NA	22042945	22038023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042885
Isoform_186352_64	chr9	-	3599	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	-30	5	-30	-5	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTCTAGTCTGAGA	NA	False	NA	NA	False	AATAAA	-11	NA	22171221	22158730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
Isoform_18636_248	chr11	-	4875	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	46	2	2	-2	multi-exon	FALSE	canonical	3	302	junction_2	28	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGTGGTATTTCTTTG	7404	False	NA	-3	True	AATAAA	-14	NA	120524380	120515944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120520563_120520643_120520708_120524187
Isoform_186365_212	chr9	-	4621	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	-3	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATCAGTTATTTAAGA	7218	False	NA	-6	True	AATAAA	-17	NA	22300449	22243310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
Isoform_186367_15	chr9	-	5395	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	57	793	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATAAAAGACTGGCTG	7240	False	NA	NA	False	AATAAA	-14	NA	22300427	22242514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
Isoform_186378_732	chr9	-	4566	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	35	4	35	-4	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7218	False	NA	-7	True	AATAAA	-16	NA	22300449	22243311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
Isoform_186381_68	chr9	-	5372	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	26	-793	26	793	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATAAAAGACTGGCTG	7209	False	NA	NA	False	AATAAA	-14	NA	22300458	22242514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
Isoform_186383_18	chr9	-	4628	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	-27	4	-27	-4	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7156	False	NA	-7	True	AATAAA	-16	NA	22300511	22243311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
Isoform_186396_349	chr9	-	1141	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	-9	2	1	-2	multi-exon	FALSE	canonical	3	365	junction_2	10.1311401135312	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAGTCATTATTAATAC	9501	False	NA	-3	True	AATAAA	-21	NA	22379653	22359608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
Isoform_186399_110	chr9	-	3508	23	FSM	ENSMUSG00000043067.16	ENSMUST00000142064.8	3489	23	-29	10	-29	-10	multi-exon	FALSE	canonical	3	87	junction_1	49.1071732317176	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAAAAATGTGCCATGT	NA	False	NA	-15	True	AATAAA	-9	NA	24414465	24323083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
Isoform_186414_63	chr9	-	4923	22	FSM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	-187	-21	-187	-4	multi-exon	FALSE	canonical	3	255	junction_7	22.7832137753209	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCATGTGTTTTC	NA	False	NA	-9	True	AATAAA	-15	NA	24414623	24323077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
Isoform_186415_388	chr9	-	4776	22	FSM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	-34	-27	-34	0	multi-exon	TRUE	canonical	3	255	junction_7	22.7832137753209	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATGTGTTTTCTGCCTG	NA	False	NA	-3	True	AATAAA	-21	NA	24414470	24323071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
Isoform_186422_210	chr9	-	2749	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	34	-2	34	2	multi-exon	FALSE	canonical	3	81	junction_2	20.4550278236258	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCCTTATGGGATATTT	NA	False	NA	NA	False	AATAAA	-16	NA	25063082	25019425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
Isoform_186423_76	chr9	-	2784	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	-1	-2	-1	2	multi-exon	FALSE	canonical	3	81	junction_2	20.4550278236258	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCCTTATGGGATATTT	NA	False	NA	NA	False	AATAAA	-16	NA	25063117	25019425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
Isoform_186434_15	chr9	-	2747	8	NNC	ENSMUSG00000008429.9	novel	2781	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	36.7145636454183	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGCCTTATGGGATAT	NA	False	NA	NA	False	AATAAA	-14	NA	25063111	25019427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_25020302_25020735_25020851_25021735_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
Isoform_186437_41	chr9	-	3676	19	FSM	ENSMUSG00000036395.16	ENSMUST00000066560.13	3688	19	13	-1	13	0	multi-exon	FALSE	canonical	3	9	junction_2	5.66884489725515	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTTGTGTCTGGGGA	NA	False	NA	NA	False	AATAAA	-16	NA	26717751	26674339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_26676120_26676397_26676515_26676875_26676988_26677280_26677369_26678372_26678452_26678690_26678763_26679015_26679157_26679714_26679822_26680331_26680413_26681035_26681174_26682323_26682409_26685268_26685340_26689314_26689397_26691969_26692063_26703077_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26717593
Isoform_186438_54	chr9	-	2004	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	31	824	-10	408	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTCTCCTAAGGCAGT	9279	False	NA	-1	True	ATTAAA	-27	NA	26910814	26886263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_186439_103	chr9	-	1817	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	31	1011	-10	221	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGGATTTTTTATTTG	9279	False	NA	-13	True	AATAAA	-26	NA	26910814	26886450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_186440_29	chr9	-	2039	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	-4	824	-4	408	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTCTCCTAAGGCAGT	9244	False	NA	-1	True	ATTAAA	-27	NA	26910849	26886263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_186444_26	chr9	-	2829	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	31	-1	-10	1	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTATTTTCATGTTA	9279	False	NA	NA	False	AGTAAA	-26	NA	26910814	26885438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_186446_14	chr9	-	2873	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	-14	0	3	0	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATTTTCATGTT	9234	False	NA	NA	False	AGTAAA	-25	NA	26910859	26885439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_186448_16	chr9	-	2078	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	2	408	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTCTCCTAAGGCAGT	9233	False	NA	-1	True	ATTAAA	-27	NA	26910860	26886263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
Isoform_186449_29	chr9	-	1878	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-4	219	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTGGATTTTTTATT	9244	False	NA	-15	True	AATAAA	-24	NA	26910849	26886452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
Isoform_18645_41	chr11	-	1554	9	NIC	ENSMUSG00000025140.16	novel	2914	8	NA	NA	-10	-1056	combination_of_known_junctions	FALSE	canonical	2	46	junction_1	319.603269695415	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTAGACTACTTCCTGCT	NA	False	NA	-10	True	NA	NA	NA	120534584	120527593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
Isoform_186450_13	chr9	-	2871	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	17	1	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTATTTTCATGTTA	9265	False	NA	NA	False	AGTAAA	-26	NA	26910828	26885438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
Isoform_186452_15	chr9	-	2456	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-10	208	intron_retention	FALSE	canonical	3	181	junction_9	24.6986779273309	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTTTGGAATATTTG	9279	False	NA	-26	True	AATAAA	-13	NA	26910814	26886463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_186453_14	chr9	-	2655	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-10	407	intron_retention	FALSE	canonical	3	181	junction_9	24.6986779273309	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTTCTCCTAAGGCAG	9279	False	NA	-2	True	ATTAAA	-26	NA	26910814	26886264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_186455_6	chr9	-	2371	9	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	16	218	intron_retention	FALSE	canonical	3	9	junction_6	79.2976000582615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATATTTGGATTTTTTAT	9264	False	NA	-16	True	AATAAA	-23	NA	26910829	26886453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26902535_26902706_26903455_26903557_26910689
Isoform_186456_5	chr9	-	1957	11	NNC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	2	219	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	74.7347977852352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTGGATTTTTTATT	9233	False	NA	-15	True	AATAAA	-24	NA	26910860	26886452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_26887057_26888851_26889051_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_186460_126	chr9	-	3585	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-8	-2	-8	2	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGGTCTTTCCTTC	NA	False	NA	-1	True	ATTAAA	-44	NA	26941369	26919064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
Isoform_186467_7	chr9	-	6847	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-9	-3263	-9	3263	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTGTGTGTGGCCAC	NA	False	NA	NA	False	NA	NA	NA	26941370	26915803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
Isoform_186470_99	chr9	-	1943	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27066690	27008679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
Isoform_186476_54	chr9	-	2000	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4337	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27033509	27008679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
Isoform_186481_49	chr9	-	1917	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5189	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27032657	27008679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
Isoform_186483_5	chr9	-	1742	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5136	-228	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTGTTTCAAAACGTA	NA	False	NA	NA	False	TATAAA	-17	NA	27032710	27008907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
Isoform_186485_5	chr9	-	2060	10	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5199	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	87.2579544642433	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTGTATTTTTTTTT	NA	False	NA	0	True	ATTAAA	-15	NA	27032647	27008678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27011611_27011764_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
Isoform_186487_5	chr9	-	1218	5	FSM	ENSMUSG00000031990.16	ENSMUST00000167074.2	1234	5	7	9	7	-9	multi-exon	FALSE	canonical	3	88	junction_4	57.1401785086466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27066707	27011972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
Isoform_186488_5	chr9	-	1230	5	NNC	ENSMUSG00000031990.16	novel	1234	5	NA	NA	4365	-9	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	72.4844810976805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27033481	27011972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
Isoform_186489_9	chr9	-	1203	5	NNC	ENSMUSG00000031990.16	novel	1234	5	NA	NA	5161	-9	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_4	63.0931850519531	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27032685	27011972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
Isoform_186490_6	chr9	-	6035	8	FSM	ENSMUSG00000033453.9	ENSMUST00000065112.7	5928	8	-105	-2	-105	2	multi-exon	FALSE	canonical	1	3	junction_2	0.989743318610787	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTCTGTCTCTGTAT	NA	False	NA	NA	False	AATAAA	-24	NA	30833853	30810448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_30814086_30815776_30815953_30816055_30816238_30817356_30817535_30821893_30822178_30822405_30822574_30822976_30823110_30832576
Isoform_1865_369	chr10	-	3910	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	482	-3	-156	3	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTGCTCTGGTGTGC	NA	False	NA	-7	True	AATAAA	-17	NA	34083229	34027385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
Isoform_186512_2740	chr9	-	3229	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	25	5	25	-5	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	2740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31043124	31000702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
Isoform_186513_32	chr9	-	3284	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	-30	5	-30	-5	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31043179	31000702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
Isoform_186519_45	chr9	-	3134	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	10840	-5	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_18	138.463894210729	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31032183	31000702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31031995
Isoform_186529_53	chr9	-	3193	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-5	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	148.035462879326	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31043124	31000702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
Isoform_186541_60	chr9	-	3692	18	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	434.500086604727	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8717	False	NA	-9	True	AATAAA	-19	NA	31123109	31060852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
Isoform_186542_51	chr9	-	3524	17	FSM	ENSMUSG00000031996.18	ENSMUST00000079758.9	3504	17	-20	0	2	0	multi-exon	FALSE	canonical	3	24	junction_5	460.436596476648	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8717	False	NA	-9	True	AATAAA	-19	NA	31123109	31060852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
Isoform_186562_2059	chr9	-	3656	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	-22	0	2	0	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	2059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8717	False	NA	-9	True	AATAAA	-19	NA	31123109	31060852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
Isoform_186573_1249	chr9	-	3488	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-26	0	2	0	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8717	False	NA	-9	True	AATAAA	-19	NA	31123109	31060852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
Isoform_186586_291	chr9	-	2070	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	23	2	23	-2	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTTGTGGGGCTCTGT	NA	False	NA	-4	True	ATTAAA	-22	NA	35028146	34957873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
Isoform_186587_6	chr9	-	2195	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	-101	1	-101	-1	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTGGGGCTCTGTG	NA	False	NA	-3	True	ATTAAA	-23	NA	35028270	34957872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
Isoform_18659_22	chr11	-	1929	8	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	348.252664551683	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534541	120530239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534406
Isoform_186593_229	chr9	-	1234	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	40	0	-28	0	multi-exon	FALSE	canonical	3	621	junction_4	33.1083071146804	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGTAGCCCAGTAG	NA	False	NA	-3	True	AATAAA	-22	NA	35087317	35035703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
Isoform_186594_787	chr9	-	1207	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	64	3	-4	1	multi-exon	FALSE	canonical	3	621	junction_4	33.1083071146804	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGATGGTGTAGCCCAG	NA	False	NA	-6	True	AATAAA	-19	NA	35087293	35035706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
Isoform_186597_49	chr9	-	1347	7	NNC	ENSMUSG00000032040.16	novel	1445	7	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	302.376375105963	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGATGGTGTAGCCCAG	NA	False	NA	-6	True	AATAAA	-19	NA	35087292	35035706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_35036141_35037206_35037348_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
Isoform_18660_698	chr11	-	1857	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	-10	14	-10	-14	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAATCCC	NA	False	NA	-30	True	NA	NA	NA	120534584	120530255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
Isoform_186600_55	chr9	-	2275	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	36	-1	-9	1	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8013	False	NA	NA	False	NA	NA	NA	35111188	35098079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
Isoform_186601_9	chr9	-	2359	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	-48	-1	-6	1	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	7929	False	NA	NA	False	NA	NA	NA	35111272	35098079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
Isoform_186603_14	chr9	-	4504	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	36	-2230	-9	-4	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGTTGTTTCATCTT	8013	False	NA	NA	False	NA	NA	NA	35111188	35095850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
Isoform_186604_6	chr9	-	4674	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	22	-2386	22	152	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTGTAAATGACTATTT	7999	False	NA	NA	False	ATTAAA	-16	NA	35111202	35095694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
Isoform_186605_4	chr9	-	2306	7	FSM	ENSMUSG00000032041.16	ENSMUST00000177129.8	2366	7	61	-1	1	1	multi-exon	FALSE	canonical	2	3	junction_6	26.9160216640985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	7978	False	NA	NA	False	NA	NA	NA	35111223	35098079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111156
Isoform_186606_22	chr9	-	2300	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	43	-560	1	1	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	7978	False	NA	NA	False	NA	NA	NA	35111223	35098079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
Isoform_186607_50	chr9	-	2265	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	78	-560	-9	1	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8013	False	NA	NA	False	NA	NA	NA	35111188	35098079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
Isoform_186610_14	chr9	-	4493	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	79	-2789	-8	-4	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGTTGTTTCATCTT	8014	False	NA	NA	False	NA	NA	NA	35111187	35095850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
Isoform_186611_9	chr9	-	4658	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	70	-2945	-17	152	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTGTAAATGACTATTT	8005	False	NA	NA	False	ATTAAA	-16	NA	35111196	35095694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
Isoform_186612_6	chr9	-	4530	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	42	-2789	0	-4	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGTTGTTTCATCTT	7977	False	NA	NA	False	NA	NA	NA	35111224	35095850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
Isoform_186617_51	chr9	-	2229	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	46	14	-8	-14	multi-exon	FALSE	canonical	3	179	junction_9	18.9747200242849	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGC	NA	False	NA	NA	False	NA	NA	NA	35122305	35115517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
Isoform_186618_513	chr9	-	2166	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	109	14	0	-14	multi-exon	FALSE	canonical	3	179	junction_9	18.9747200242849	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGC	NA	False	NA	NA	False	NA	NA	NA	35122242	35115517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
Isoform_186619_16	chr9	-	2050	10	NIC	ENSMUSG00000039048.16	novel	2289	11	NA	NA	0	-16	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	66.2654594122089	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	35122242	35115519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35121240_35121462_35122102
Isoform_186625_13	chr9	-	2176	11	FSM	ENSMUSG00000039048.16	ENSMUST00000043805.15	2232	11	56	0	-2	0	multi-exon	TRUE	canonical	1	3	junction_1	62.4467773387867	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122220	35115503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35116438_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
Isoform_186628_11	chr9	-	2354	10	NIC	ENSMUSG00000039048.16	novel	2232	11	NA	NA	1	-14	intron_retention	FALSE	canonical	3	179	junction_8	19.4218916829234	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGC	NA	False	NA	NA	False	NA	NA	NA	35122249	35115517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
Isoform_186631_65	chr9	-	1613	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	35	212	-3	3	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGCTCTACTTTGAAG	6399	False	NA	-17	True	ATTAAA	-24	NA	35179066	35128527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
Isoform_186634_3	chr9	-	1596	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	-19	283	-19	-68	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCTTTTACAGTGTACA	6345	False	NA	-88	True	TTTAAA	-25	NA	35179120	35128598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
Isoform_186636_4	chr9	-	1863	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	5	-8	5	8	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTTATGAAATTTATT	6369	False	NA	NA	False	TATAAA	-22	NA	35179096	35128307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
Isoform_186638_37	chr9	-	1385	7	FSM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	10	267	-3	3	multi-exon	FALSE	canonical	3	54	junction_4	50.0954644209988	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGCTCTACTTTGAAG	6399	False	NA	-17	True	ATTAAA	-24	NA	35179066	35128527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
Isoform_186639_3	chr9	-	1293	6	NIC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	77.9143119073768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAACTCTGGCTCTACTT	6393	False	NA	-22	True	ATTAAA	-19	NA	35179072	35128532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35179018
Isoform_186640_30	chr9	-	1611	8	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	45.5246064883417	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGCTCTACTTTGAAG	6398	False	NA	-17	True	ATTAAA	-24	NA	35179067	35128527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
Isoform_186641_11	chr9	-	1361	7	NNC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	58.402815761647	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGGCTCTACTTTGA	6418	False	NA	-19	True	ATTAAA	-22	NA	35179047	35128529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
Isoform_186643_19	chr9	-	1703	12	FSM	ENSMUSG00000032101.7	ENSMUST00000034612.7	6934	12	30	5201	30	-5201	multi-exon	FALSE	canonical	3	22	junction_11	3.32533475603125	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGAGGGCTCTTTGAA	NA	False	NA	NA	False	AATAAA	-22	NA	35469794	35453143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35453356_35454893_35455083_35457109_35457273_35458076_35458315_35462580_35462759_35464132_35464248_35465602_35465706_35465812_35465906_35468061_35468198_35468677_35468726_35468980_35469048_35469633
Isoform_186645_307	chr9	-	1671	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	296	6	-5	-6	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGAGTTTGAACCTT	NA	False	NA	45	True	ATTAAA	-11	NA	35481398	35472121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
Isoform_186656_9	chr9	-	2615	12	FSM	ENSMUSG00000032113.17	ENSMUST00000172702.9	3797	12	225	957	225	1	multi-exon	FALSE	canonical	3	367	junction_7	38.0821209215597	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGGTCCTGTATTCCT	1157	False	NA	NA	False	ATTAAA	-13	NA	36637445	36620734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092
Isoform_18666_85	chr11	-	1823	8	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	1	-14	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	343.012048339592	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAATCCC	NA	False	NA	-30	True	NA	NA	NA	120534573	120530255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534528
Isoform_186664_269	chr9	-	2382	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	58	957	-15	1	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGGTCCTGTATTCCT	706	False	NA	NA	False	ATTAAA	-13	NA	36637896	36620734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
Isoform_186669_35	chr9	-	3179	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	58	160	-15	-160	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTAACAACTGTTTT	706	False	NA	-8	True	TATAAA	-18	NA	36637896	36619937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
Isoform_18667_73	chr11	-	1718	7	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	364.341148132107	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAATCCC	NA	False	NA	-30	True	NA	NA	NA	120534574	120530255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120534505
Isoform_186675_9	chr9	-	2159	12	FSM	ENSMUSG00000032113.17	ENSMUST00000174105.8	2142	12	-15	-2	-15	2	multi-exon	FALSE	canonical	3	20	junction_10	131.27033490643	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGGTCCTGTATTCCTT	706	False	NA	NA	False	ATTAAA	-14	NA	36637896	36620733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36637092_36637175_36637858
Isoform_186699_1761	chr9	-	2729	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	70	3068	0	14	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGTGCTGTTTCTGGGC	NA	False	NA	-5	True	NA	NA	NA	36678905	36643707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
Isoform_1867_61	chr10	-	4176	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	216	-3	136	3	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTGCTCTGGTGTGC	NA	False	NA	-7	True	AATAAA	-17	NA	34083495	34027385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
Isoform_186702_46	chr9	-	3675	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	58	2134	-2	948	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAGTGGGAAAGGTTA	NA	False	NA	5	True	AATACA	-25	NA	36678917	36642773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
Isoform_186729_80	chr9	-	2377	11	FSM	ENSMUSG00000062762.18	ENSMUST00000163192.11	2309	11	-67	-1	21	1	multi-exon	FALSE	canonical	3	35	junction_10	155.462664328127	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTATAATGTTTGAT	NA	False	NA	-7	True	ATTAAA	-18	NA	36708636	36690453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708299
Isoform_186730_22	chr9	-	2445	11	FSM	ENSMUSG00000062762.18	ENSMUST00000163192.11	2309	11	-135	-1	-15	1	multi-exon	FALSE	canonical	3	35	junction_10	155.462664328127	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTATAATGTTTGAT	NA	False	NA	-7	True	ATTAAA	-18	NA	36708704	36690453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708299
Isoform_186732_905	chr9	-	2156	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	65	-1	33	1	multi-exon	TRUE	canonical	3	488	junction_2	34.4551882885582	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTATAATGTTTGAT	NA	False	NA	-7	True	ATTAAA	-18	NA	36708624	36690453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
Isoform_186733_128	chr9	-	2215	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	4	1	4	-1	multi-exon	FALSE	canonical	3	488	junction_2	34.4551882885582	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATATGTATAATGTTTG	NA	False	NA	-9	True	ATTAAA	-16	NA	36708685	36690455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
Isoform_186738_17	chr9	-	2043	10	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	21	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	159.906994573659	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTATAATGTTTGAT	NA	False	NA	-7	True	ATTAAA	-18	NA	36708636	36690453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
Isoform_186744_11	chr9	-	3537	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	93	2	0	1	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATGCACAGTTCTC	NA	False	NA	-7	True	AGTAAA	-17	NA	37058610	36802279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
Isoform_186745_13	chr9	-	3488	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	142	2	1	1	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATGCACAGTTCTC	NA	False	NA	-7	True	AGTAAA	-17	NA	37058561	36802279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
Isoform_186747_86	chr9	-	2610	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	328	3005	4	-78	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCACTGCTTATCCTTG	NA	False	NA	-4	True	AATACA	-17	NA	37166706	37141885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
Isoform_186751_37	chr9	-	2890	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	325	2728	1	3	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTGGTTCTCACTTTA	NA	False	NA	0	True	AATAAA	-13	NA	37166709	37141608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
Isoform_186753_12	chr9	-	5618	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	325	0	1	0	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGACATATGCTTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	37166709	37138880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
Isoform_186757_3	chr9	-	4396	16	NIC	ENSMUSG00000032122.16	novel	2945	19	NA	NA	-19	3	intron_retention	FALSE	canonical	1	1	junction_10	19.0846069443995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTGGTTCTCACTTTA	NA	False	NA	0	True	AATAAA	-13	NA	37166729	37141608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
Isoform_186758_3	chr9	-	7101	16	FSM	ENSMUSG00000034303.9	ENSMUST00000213633.2	3331	16	34	-3804	-6	3804	multi-exon	FALSE	canonical	2	5	junction_9	5.33166640616859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTGTATTGACTTTTA	NA	False	NA	-1	True	AATACA	-17	NA	37259694	37183326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_37187862_37188653_37188778_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259563
Isoform_186759_21	chr9	-	2318	12	ISM	ENSMUSG00000034303.9	ENSMUST00000239439.2	3525	16	9	27062	-2	10085	5prime_fragment	FALSE	canonical	2	5	junction_5	5.1425947722658	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGAGGATTGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	37259679	37214192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259329
Isoform_18676_29	chr11	-	2513	11	FSM	ENSMUSG00000042988.11	ENSMUST00000106177.8	2212	11	-297	-4	-74	4	multi-exon	FALSE	canonical	3	96	junction_10	9.96042167782067	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCACCCTGAACCTTG	9499	False	NA	NA	False	ATTAAA	-25	NA	120551729	120544609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820
Isoform_186761_9	chr9	-	2106	12	ISM	ENSMUSG00000034303.9	ENSMUST00000213633.2	3331	16	41	27048	1	10099	5prime_fragment	FALSE	canonical	2	5	junction_5	5.1425947722658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGTTCTTTGATTCT	NA	False	NA	NA	False	NA	NA	NA	37259687	37214178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259563
Isoform_186762_3	chr9	-	1280	4	FSM	ENSMUSG00000053310.12	ENSMUST00000065668.12	1453	4	173	0	173	0	multi-exon	FALSE	canonical	3	21	junction_3	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGGTGCAGGGTGGGG	NA	False	NA	0	True	AATAAA	-19	NA	37464027	37455787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_37456628_37456995_37457014_37457243_37457471_37463832
Isoform_186763_8	chr9	-	854	4	FSM	ENSMUSG00000053310.12	ENSMUST00000065668.12	1453	4	180	419	180	43	multi-exon	FALSE	canonical	3	21	junction_3	6.12825877028341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCACCAAGTCCTTTCG	NA	False	NA	-2	True	NA	NA	NA	37464020	37456206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_37456628_37456995_37457014_37457243_37457471_37463832
Isoform_186764_3	chr9	-	583	5	FSM	ENSMUSG00000001948.11	ENSMUST00000002013.11	696	5	109	4	-43	-4	multi-exon	TRUE	canonical	2	6	junction_2	1.92028643696715	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTTGTGGTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	37524909	37514589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_37514783_37517088_37517167_37518912_37518984_37523131_37523315_37524851
Isoform_186770_3219	chr9	-	1484	9	FSM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	76	424	1	-5	multi-exon	FALSE	canonical	3	1493	junction_6	94.6836839165017	3219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTTATTTGTTTCTT	NA	False	NA	-25	True	AATAAA	-13	NA	37568532	37560482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
Isoform_186785_4	chr9	-	3529	20	FSM	ENSMUSG00000038112.16	ENSMUST00000119722.8	4224	20	70	625	10	-625	multi-exon	TRUE	canonical	1	1	junction_2	1.49421784911351	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTTGGTCTTTTGTC	NA	False	NA	1	True	ATTAAA	-20	NA	39514913	39499430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_39500422_39500938_39501066_39501896_39502028_39502499_39502605_39502698_39502798_39504091_39504340_39504624_39504726_39504966_39505132_39505836_39505952_39507890_39507971_39508350_39508496_39508903_39508993_39509209_39509380_39510573_39510689_39510940_39511117_39511234_39511458_39511763_39511967_39512075_39512134_39514510_39514608_39514822
Isoform_186808_50	chr9	-	7021	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	171	3523	171	1496	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	NA	False	NA	-35	True	AATAAA	-19	NA	42035422	41879538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
Isoform_186811_30	chr9	-	7257	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-67	3525	-67	1494	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGACGGAGTGCATTCTC	NA	False	NA	-37	True	AATAAA	-17	NA	42035660	41879540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
Isoform_186813_51	chr9	-	7034	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-25	3706	-25	1313	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAACCAGGTTGATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	42035618	41879721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
Isoform_186817_5	chr9	-	10707	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	10	-2	10	2	multi-exon	TRUE	canonical	3	333	junction_27	73.2507244219374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGCAGCAGCCGATTT	NA	False	NA	-9	True	AATAAA	-18	NA	42035583	41876013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
Isoform_186830_7	chr9	-	2286	6	FSM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	-12	-597	-12	597	multi-exon	FALSE	canonical	3	15	junction_5	75.9910521048367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCACTTAAATGTTATAG	NA	False	NA	-9	True	AATAAA	-20	NA	42175508	42165431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175417
Isoform_186833_177	chr9	-	2252	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	2535	0	603	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAATGTTATAGCACAAA	NA	False	NA	-3	True	AATAAA	-26	NA	42175552	42165425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
Isoform_186837_46	chr9	-	4788	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	-1	0	1	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTGTGGACCTGTG	NA	False	NA	0	True	NA	NA	NA	42175552	42162889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
Isoform_186841_6	chr9	-	2219	5	FSM	ENSMUSG00000032018.15	ENSMUST00000217513.2	703	5	-58	-1458	-57	594	multi-exon	TRUE	canonical	2	2	junction_4	78.337411241373	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATCCACTTAAATGTTA	NA	False	NA	-12	True	AATAAA	-17	NA	42175609	42165434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42175501
Isoform_186843_7	chr9	-	3954	2	FSM	ENSMUSG00000037287.16	ENSMUST00000142775.2	2327	2	46	-1673	46	-1	multi-exon	FALSE	canonical	2	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTGTTCTGAGTGT	4400	False	NA	-2	True	ATTAAA	-16	NA	42339488	42323612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_42327446_42339367
Isoform_186850_42	chr9	-	5018	8	FSM	ENSMUSG00000037287.16	ENSMUST00000066148.12	5000	8	-19	1	-12	-1	multi-exon	FALSE	canonical	3	34	junction_7	5.55124549363584	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTGTTCTGAGTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	42383573	42323612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42383361
Isoform_186852_4	chr9	-	4691	6	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	19.90577805563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGTTCTGAGTGTTT	NA	False	NA	0	True	ATTAAA	-18	NA	42383534	42323610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42383361
Isoform_186853_5	chr9	-	4792	7	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	15.8788818526019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTGTTCTGAGTGTT	NA	False	NA	-1	True	ATTAAA	-17	NA	42383528	42323611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42361219_42361360_42362908_42363059_42383361
Isoform_186854_8	chr9	-	3617	21	FSM	ENSMUSG00000032017.15	ENSMUST00000114865.8	5887	21	-6	2276	-6	1	multi-exon	TRUE	canonical	1	2	junction_7	2.95761728423405	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTGATGTCCTTT	NA	False	NA	NA	False	ATTAAA	-34	NA	42855795	42431706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_42432482_42435775_42435895_42448609_42448739_42453117_42453344_42455053_42455220_42458862_42459037_42461702_42461813_42477594_42477709_42502645_42502850_42509149_42509258_42533354_42533460_42534221_42534375_42540272_42540435_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788_42719921_42730165_42730271_42855622
Isoform_186855_5	chr9	-	4121	31	ISM	ENSMUSG00000059495.15	ENSMUST00000072767.7	10059	42	89546	4963	10721	-4963	internal_fragment	FALSE	canonical	3	18	junction_25	4.01995024844836	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCCTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	42927235	42880101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198
Isoform_186857_6	chr9	-	5696	40	NIC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	-18	-5013	combination_of_known_junctions	FALSE	canonical	2	9	junction_32	5.59632639907851	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATTTATTTGACTTCA	NA	False	NA	NA	False	TATAAA	-32	NA	43017300	42880151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
Isoform_186858_3	chr9	-	5733	40	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-4	-4965	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	6.17666708711603	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGCCTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	43017286	42880103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
Isoform_186860_3	chr9	-	5888	40	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-156	-4962	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	6.17666708711603	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43017438	42880100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
Isoform_186861_4	chr9	-	1424	5	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-177	3	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	5.11737237261468	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACCTTTGTTCTTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	43017459	42937296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
Isoform_186862_4	chr9	-	2325	5	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-20	4	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	5.11737237261468	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAATTAA	NA	False	NA	NA	False	NA	NA	NA	43017302	42936238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
Isoform_186865_75	chr9	-	3481	3	FSM	ENSMUSG00000048503.8	ENSMUST00000061833.6	3503	3	20	2	-6	-2	multi-exon	FALSE	canonical	3	19	junction_1	3	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGCCTTCGTATCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43027845	43019946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_43023154_43024755_43024956_43027771
Isoform_186866_141	chr9	-	2597	13	FSM	ENSMUSG00000032015.17	ENSMUST00000176636.5	2522	13	-74	-1	-74	1	multi-exon	FALSE	canonical	3	54	junction_12	13.5359603361646	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGTTCAGAGGAGTGT	NA	False	NA	NA	False	CATAAA	-18	NA	43117126	43035232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116950
Isoform_186868_45	chr9	-	2798	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5493	4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	21.2895057611856	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCAGAGGAGTGTTTT	5114	False	NA	NA	False	CATAAA	-21	NA	43111559	43035229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43111185
Isoform_186870_6	chr9	-	2476	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	6357	5	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_12	24.3903441732356	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCAGAGGAGTGTTTTA	5978	False	NA	NA	False	CATAAA	-22	NA	43110695	43035228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43110644
Isoform_186871_3	chr9	-	2445	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	250	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	23.9043231794307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGTTCAGAGGAGTGT	NA	False	NA	NA	False	CATAAA	-18	NA	43116802	43035232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116778
Isoform_186872_4	chr9	-	2865	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5490	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	24.8791523614094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAGATGTTCAGAGGAG	5111	False	NA	NA	False	CATAAA	-15	NA	43111562	43035235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110466_43111185
Isoform_186874_89	chr9	-	1876	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	-18	668	-18	564	multi-exon	FALSE	canonical	3	37	junction_2	2.62466929133727	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGGCGCCAGCTTAGG	NA	False	NA	-3	True	AATAAA	-22	NA	43151226	43133199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
Isoform_186875_4	chr9	-	1995	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	-132	663	-132	569	multi-exon	FALSE	canonical	3	37	junction_2	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCAGCTTAGGCTTTC	NA	False	NA	2	True	AATAAA	-27	NA	43151340	43133194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
Isoform_186876_4	chr9	-	2773	17	NIC	ENSMUSG00000034342.10	novel	3452	18	NA	NA	1	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	3.99804639792987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGAGTTCTGGTTCACT	2975	False	NA	-2	True	AATAAA	-19	NA	44145285	44054274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44054352_44062887_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
Isoform_186878_11	chr9	-	5050	16	FSM	ENSMUSG00000034342.10	ENSMUST00000206720.2	11372	16	40	6282	-13	4	multi-exon	FALSE	canonical	1	3	junction_5	3.59382185918495	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAATGAAAAT	2954	False	NA	NA	False	NA	NA	NA	44145306	44060554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
Isoform_186882_3	chr9	-	3662	10	NIC	ENSMUSG00000032109.16	novel	3621	10	NA	NA	25	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCTGTGGTCTCCACTT	5940	False	NA	NA	False	ATTAAA	-16	NA	44179459	44164015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44164837_44165288_44165541_44166727_44166815_44167628_44168225_44173528_44174351_44174925_44175546_44175999_44176089_44176460_44176531_44177040_44177163_44179276
Isoform_186883_5	chr9	-	3542	15	FSM	ENSMUSG00000032131.17	ENSMUST00000161354.9	3999	15	456	1	-21	-1	multi-exon	TRUE	canonical	0	0	junction_2	1.34202101628971	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGGTGTGAATGTCGA	NA	False	NA	NA	False	AATAAA	-18	NA	44199456	44184485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512_44198763_44199310
Isoform_186887_6	chr9	-	5462	11	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	19.8859246704799	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGTGGTGGTGCCT	NA	False	NA	-1	True	NA	NA	NA	44216931	44203735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216078_44216244_44216912
Isoform_186890_29	chr9	-	5297	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	37	-1	11	1	multi-exon	FALSE	canonical	3	40	junction_7	6.83852557930183	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGTGGTGGTGCCT	NA	False	NA	-1	True	NA	NA	NA	44216931	44203735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
Isoform_186892_6	chr9	-	5789	10	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_9	14.5296631451356	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGTGGTGGTGCCT	NA	False	NA	-1	True	NA	NA	NA	44216942	44203735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216431
Isoform_186895_129	chr9	-	3355	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	4	978	4	-4	multi-exon	FALSE	canonical	3	36	junction_2	6.29548537403388	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGGGAGTGGCTGGTTA	5319	False	NA	NA	False	NA	NA	NA	44231578	44221511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
Isoform_186897_20	chr9	-	3328	14	NIC	ENSMUSG00000032120.12	novel	4337	14	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	10.0701680236066	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGGGAGTGGCTGGTTA	5349	False	NA	NA	False	NA	NA	NA	44231548	44221511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44222565_44224802_44225089_44225174_44225312_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
Isoform_186903_1826	chr9	-	1537	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	58	10	58	3	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	1826	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGTCTGAGACCTTTCT	1466	False	NA	-1	True	AATAAA	-23	NA	44255467	44247645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
Isoform_186916_7	chr9	-	3173	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-2	-159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	77.9168787875901	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGACTTTCCAGGTGTTT	6402	False	NA	-20	True	AATAAA	-34	NA	44272943	44259383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272742
Isoform_186918_3	chr9	-	5409	13	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-6	-170	intron_retention	FALSE	canonical	3	187	junction_5	19.7784605063185	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACTTTATGGAGACTT	6398	False	NA	-31	True	AATAAA	-23	NA	44272947	44259394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44266448_44266995_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135
Isoform_186919_316	chr9	-	831	4	FSM	ENSMUSG00000032112.11	ENSMUST00000213747.2	935	4	42	62	-22	-1	multi-exon	FALSE	canonical	3	851	junction_3	13.0213499897497	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCTCTCCTAACTGA	2009	False	NA	-9	True	AATAAA	-16	NA	44318361	44315056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100
Isoform_18692_4	chr11	-	1941	10	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	82	3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	32.0685993103596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTCACCCTGAACCTT	9878	False	NA	NA	False	ATTAAA	-24	NA	120551350	120544610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820
Isoform_186920_702	chr9	-	984	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	235	1	-3	-1	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCTCTCCTAACTGA	1708	False	NA	-9	True	AATAAA	-16	NA	44318662	44315056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
Isoform_186921_13	chr9	-	1155	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	64	1	64	-1	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCTCTCCTAACTGA	1537	False	NA	-9	True	AATAAA	-16	NA	44318833	44315056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
Isoform_186924_12	chr9	-	1199	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	20	1	20	-1	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCTCTCCTAACTGA	1493	False	NA	-9	True	AATAAA	-16	NA	44318877	44315056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
Isoform_186931_9	chr9	-	1217	11	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	9.58331884056875	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTACAGCTGATTGAACC	8940	False	NA	-6	True	AATAAA	-15	NA	44329336	44321461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_186932_26	chr9	-	1198	11	FSM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	521	6	-9	-2	multi-exon	FALSE	canonical	3	28	junction_6	11.2853887837327	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTACAGCTGATTGAACC	8931	False	NA	-6	True	AATAAA	-15	NA	44329345	44321461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_186933_3	chr9	-	1225	11	FSM	ENSMUSG00000043923.9	ENSMUST00000214494.2	1080	11	3	-148	3	-2	multi-exon	FALSE	canonical	2	4	junction_5	17.9677488851553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTACAGCTGATTGAACC	8953	False	NA	-6	True	AATAAA	-15	NA	44329323	44321461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324341_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_186934_3	chr9	-	1315	10	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	36	junction_5	10.0995049383621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGATTGAACCTGTAAA	8962	False	NA	0	True	AATAAA	-21	NA	44329314	44321455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_186935_10	chr9	-	3449	8	NIC	ENSMUSG00000043923.9	novel	1080	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	36	junction_3	10.6732547682016	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCTGATTGAACCTG	8929	False	NA	-4	True	AATAAA	-17	NA	44329347	44321459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44321662_44321744_44321878_44321987_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_186936_6	chr9	-	3665	7	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	40	junction_4	8.64902049688608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCTGATTGAACCTG	8954	False	NA	-4	True	AATAAA	-17	NA	44329322	44321459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44321662_44321744_44321878_44321987_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_186937_6	chr9	-	2646	5	FSM	ENSMUSG00000043923.9	ENSMUST00000213813.2	2675	5	0	29	0	-29	multi-exon	FALSE	canonical	3	40	junction_2	8.04285397107271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTTGGATATAACAATA	8940	False	NA	NA	False	NA	NA	NA	44329336	44322685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_186938_6	chr9	-	903	3	ISM	ENSMUSG00000074397.6	ENSMUST00000215980.2	676	4	-242	221	-121	-221	5prime_fragment	FALSE	canonical	3	31	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGACCCTGGGGCTGG	9093	False	NA	-1	True	AATAAA	-21	NA	44352554	44347072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_44347400_44347500_44347576_44352053
Isoform_186939_11	chr9	-	760	3	ISM	ENSMUSG00000074397.6	ENSMUST00000215980.2	676	4	-104	226	17	-226	5prime_fragment	FALSE	canonical	3	31	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGACCTGGACCCTGGG	9231	False	NA	-6	True	AATAAA	-16	NA	44352416	44347077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_44347400_44347500_44347576_44352053
Isoform_18694_16	chr11	-	2490	3	ISM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	0	0	0	0	intron_retention	FALSE	canonical	3	880	junction_2	8.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_120602133_120602215_120602305_120602528
Isoform_186941_5	chr9	-	1068	5	FSM	ENSMUSG00000041523.4	ENSMUST00000047740.4	1083	5	12	3	12	-3	multi-exon	FALSE	canonical	3	6	junction_2	1.4790199457749	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCCGACCATGTCTAT	8965	False	NA	NA	False	AATAAA	-22	NA	44366261	44364014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44364407_44364779_44364851_44365091_44365231_44365358_44365491_44365927
Isoform_186942_11	chr9	-	2999	13	NIC	ENSMUSG00000048537.17	novel	3589	17	NA	NA	-101	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	9.3392838174146	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44619825	44597604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609015_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690
Isoform_186943_3	chr9	-	5372	21	NIC	ENSMUSG00000048537.17	novel	5461	22	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	12.916655913974	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTGTGGAAGTCTGA	2346	False	NA	-1	True	AATAAA	-17	NA	44646515	44597605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609015_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316_44639398_44646421
Isoform_186944_10	chr9	-	3048	13	NIC	ENSMUSG00000048537.17	novel	4643	18	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	9.86963637740632	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGAGTGTGGAAGTCTG	NA	False	NA	-2	True	AATAAA	-16	NA	44619798	44597606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619579
Isoform_186945_62	chr9	-	2938	13	ISM	ENSMUSG00000048537.17	ENSMUST00000144251.8	3589	17	4738	2	-75	0	3prime_fragment	FALSE	canonical	3	19	junction_8	6.21601873299051	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGAGTGTGGAAGTCTG	NA	False	NA	-2	True	AATAAA	-16	NA	44619799	44597606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690
Isoform_186946_3	chr9	-	5463	22	NIC	ENSMUSG00000048537.17	novel	5461	22	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	12.2842376373573	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGAGTGTGGAAGTCTG	2350	False	NA	-2	True	AATAAA	-16	NA	44646511	44597606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690_44619820_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316_44639398_44646421
Isoform_186947_3	chr9	-	2865	13	ISM	ENSMUSG00000048537.17	ENSMUST00000156918.8	3485	16	2307	2	-12	0	3prime_fragment	FALSE	canonical	1	2	junction_12	9.86963637740632	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGAGTGTGGAAGTCTG	NA	False	NA	-2	True	AATAAA	-16	NA	44622255	44597606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219
Isoform_186948_3	chr9	-	5339	21	NIC	ENSMUSG00000048537.17	novel	5461	22	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	12.5757703541374	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	2347	False	NA	0	True	AATAAA	-18	NA	44646514	44597604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316_44639398_44646421
Isoform_186949_3	chr9	-	2594	8	NNC	ENSMUSG00000048537.17	novel	3485	16	NA	NA	-906	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.4769174633703	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44610048	44597604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44609684
Isoform_18696_14	chr11	-	878	6	FSM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	-5	0	1	0	multi-exon	FALSE	canonical	3	17	junction_5	397.451380674417	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604563	120601767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265_120603539_120604518
Isoform_186962_1696	chr9	-	3457	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	32	583	-15	-583	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	1696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGATGTTTACTGGA	NA	False	NA	-24	True	AATAAA	-11	NA	44679110	44653443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
Isoform_186965_188	chr9	-	4026	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	32	14	-15	-14	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAATGTGCT	NA	False	NA	NA	False	NA	NA	NA	44679110	44652874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
Isoform_18697_308	chr11	-	605	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	1	0	1	0	multi-exon	FALSE	canonical	3	556	junction_4	137.848422189012	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604563	120601767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
Isoform_186975_4	chr9	-	2803	8	ISM	ENSMUSG00000002032.18	ENSMUST00000002100.8	2448	9	65	3	0	-3	intron_retention	FALSE	canonical	3	7	junction_2	2.79941684889506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGAAGTGTTTGTTC	8237	False	NA	NA	False	AGTAAA	-12	NA	44710539	44705075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_44706346_44706487_44706575_44706706_44706808_44706978_44707010_44707292_44707425_44707620_44707912_44709417_44709730_44709960
Isoform_186976_8	chr9	-	2401	9	FSM	ENSMUSG00000002032.18	ENSMUST00000002100.8	2448	9	45	2	-20	-2	multi-exon	FALSE	canonical	2	3	junction_8	3.68908864084343	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGAAGTGTTTGTTCA	8217	False	NA	NA	False	AGTAAA	-13	NA	44710559	44705074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44706346_44706487_44706575_44706706_44706808_44706978_44707010_44707292_44707425_44707620_44707912_44709417_44709730_44709960_44710055_44710477
Isoform_186977_3	chr9	-	2390	9	NIC	ENSMUSG00000002032.18	novel	2448	9	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	3.92905841137543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGAAGTGTTTGTTCA	8231	False	NA	NA	False	AGTAAA	-13	NA	44710545	44705074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44706346_44706487_44706575_44706706_44706808_44706978_44707010_44707292_44707425_44707620_44707912_44709417_44709730_44709960_44710058_44710477
Isoform_186978_1439	chr9	-	451	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	36	57	1	-4	multi-exon	FALSE	canonical	3	4613	junction_2	56	1439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGCTGTGTTTTCTC	NA	False	NA	-33	True	AATAAA	-15	NA	44832004	44824571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44824765_44825948_44826110_44831907
Isoform_18698_55	chr11	-	554	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_3	359.512942125253	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120602133_120602215_120602305_120602528_120602583_120604518
Isoform_186981_5	chr9	-	3777	21	NIC	ENSMUSG00000059890.17	novel	6039	20	NA	NA	-6	392	combination_of_known_junctions	FALSE	canonical	3	18	junction_18	13.0877805605076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATGTCCTGCCATTTT	5369	False	NA	NA	False	NA	NA	NA	44876829	44836753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276_44871438_44874634_44874731_44876782
Isoform_186983_29	chr9	-	3853	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	1	394	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCTGCCATTTTTT	5352	False	NA	NA	False	NA	NA	NA	44876846	44836751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_186984_11	chr9	-	6162	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTGTTAGTTCTTCAT	5368	False	NA	-2	True	AATAAA	-17	NA	44876830	44834426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_186985_7	chr9	-	3819	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	5	335	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTTTCCTATTCTCCTTG	5327	False	NA	NA	False	TATAAA	-20	NA	44876871	44836810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_186986_5	chr9	-	3882	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	1	394	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCTGCCATTTTTT	5323	False	NA	NA	False	NA	NA	NA	44876875	44836751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_186988_8	chr9	-	3215	18	NIC	ENSMUSG00000059890.17	novel	3486	19	NA	NA	-6	-98	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	13.1741069308551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTGTGAAAATATTTT	5334	False	NA	NA	False	GATAAA	-17	NA	44876864	44844366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276_44871438_44874634_44874731_44876782
Isoform_186989_24	chr9	-	3256	18	NIC	ENSMUSG00000059890.17	novel	3486	19	NA	NA	1	-96	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	10.0238469985589	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTGAAAATATTTTAT	5352	False	NA	NA	False	GATAAA	-19	NA	44876846	44844364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_18699_7	chr11	-	629	5	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	330.906614470004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120602133_120602215_120602328_120602528_120602583_120602669_120602722_120604518
Isoform_186990_3	chr9	-	3179	17	ISM	ENSMUSG00000059890.17	ENSMUST00000117549.8	3415	20	30	7222	8	-99	5prime_fragment	FALSE	canonical	2	4	junction_16	14.6989317213871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTTGTGAAAATATTT	5330	False	NA	NA	False	GATAAA	-16	NA	44876868	44844367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44876782
Isoform_186991_10	chr9	-	2475	9	FSM	ENSMUSG00000059890.17	ENSMUST00000138559.9	3374	9	24	875	0	-875	multi-exon	FALSE	canonical	3	42	junction_4	11.548132965982	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAACACTTATTG	5346	False	NA	NA	False	AATAAA	-10	NA	44876852	44858227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_186992_4	chr9	-	836	4	ISM	ENSMUSG00000059890.17	ENSMUST00000138559.9	3374	9	9	6624	9	270	5prime_fragment	FALSE	canonical	3	48	junction_1	11.6714276000077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	5331	False	NA	NA	False	NA	NA	NA	44876867	44863976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_186997_12	chr9	-	2881	11	ISM	ENSMUSG00000043987.19	ENSMUST00000213154.2	6105	32	47941	-1316	-3255	4	3prime_fragment	FALSE	canonical	3	64	junction_3	8.47348806572594	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGAGTGTGCTGGTC	NA	False	NA	41	True	ATTAAA	-29	NA	45687084	45678239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974
Isoform_186998_15	chr9	-	3298	12	ISM	ENSMUSG00000043987.19	ENSMUST00000213154.2	6105	32	47405	-1316	-3791	4	3prime_fragment	FALSE	canonical	3	64	junction_3	8.12505562600157	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGAGTGTGCTGGTC	NA	False	NA	41	True	ATTAAA	-29	NA	45687620	45678239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162
Isoform_1870_7	chr10	-	4276	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	118	-5	38	5	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGCTCTGGTGTGCTT	NA	False	NA	-5	True	AATAAA	-19	NA	34083593	34027383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
Isoform_18700_5	chr11	-	517	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	302.505463678849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120602133_120602528_120602583_120602669_120602722_120604518
Isoform_187006_29	chr9	-	5931	32	NIC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	20	junction_21	18.7691490839651	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	32	True	ATTAAA	-20	NA	45739940	45678248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
Isoform_187008_6	chr9	-	5632	31	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	19.8072938305284	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	32	True	ATTAAA	-20	NA	45739938	45678248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
Isoform_187009_4	chr9	-	5355	29	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	18.9283018848733	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCAGTCCTGTGAGTGT	NA	False	NA	34	True	ATTAAA	-22	NA	45739950	45678246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
Isoform_18701_7	chr11	-	2601	2	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	-28	0	intron_retention	FALSE	canonical	3	880	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604592	120601767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120602305_120602528
Isoform_187012_5	chr9	-	3604	15	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	-15	-10	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.9340386434508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTCTTTTCTCTTG	9575	False	NA	7	True	ACTAAA	-37	NA	45817720	45774816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
Isoform_187015_7	chr9	-	2382	15	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	-20	88	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.9340386434508	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACACCCCTTTTCCCCT	9570	False	NA	NA	False	AATGAA	-17	NA	45817725	45776043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
Isoform_187019_25	chr9	-	2737	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	438	789	-32	1	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATCAGGTTCCATTTC	9558	False	NA	NA	False	AGTAAA	-19	NA	45817737	45775595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
Isoform_18702_6	chr11	-	688	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	556	junction_3	132.30268326833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604564	120601768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120602305_120602528_120602583_120602669_120602722_120604518
Isoform_187020_8	chr9	-	3500	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	443	21	-27	-21	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGCTCATGGATGAATT	9563	False	NA	-4	True	ACTAAA	-26	NA	45817732	45774827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
Isoform_187026_14	chr9	-	4232	26	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	32.7804819976766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866576	45849172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857065_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
Isoform_187028_12	chr9	-	4282	27	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	42.0485771487774	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTGGGAGGTGCAGG	NA	False	NA	-16	True	AATAAA	-32	NA	45866580	45849156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45858838_45858851_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
Isoform_187029_12	chr9	-	4307	27	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	40.2004776385414	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866564	45849172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45858926_45858996_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
Isoform_18703_51	chr11	-	872	8	FSM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	20	0	-17	0	multi-exon	FALSE	canonical	3	81	junction_3	11.7438650940369	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGATCTGTGCTATCTG	10004	False	NA	-4	True	AATAAA	-37	NA	120618087	120616224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
Isoform_187033_220	chr9	-	4232	26	FSM	ENSMUSG00000034908.17	ENSMUST00000038488.17	4248	26	-2	18	-2	0	multi-exon	FALSE	canonical	3	112	junction_16	17.0789226826519	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866558	45849172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
Isoform_187039_8	chr9	-	4198	6	FSM	ENSMUSG00000003131.8	ENSMUST00000215060.2	714	6	-17	-3467	-6	-2459	multi-exon	FALSE	canonical	3	7	junction_5	147.373539008874	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTACTGATGTCTGTTT	4122	False	NA	-6	True	TATAAA	-18	NA	45896139	45876615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890022_45896002
Isoform_187041_235	chr9	-	4198	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	217	2458	1	-2458	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACTGATGTCTGTTTC	4129	False	NA	-5	True	TATAAA	-19	NA	45896132	45876614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
Isoform_18705_9	chr11	-	903	7	FSM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	-46	-27	-8	27	multi-exon	FALSE	canonical	3	29	junction_2	29.9035486560077	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGGTGTTGCCTGGTTC	9976	False	NA	23	True	NA	NA	NA	120618115	120616197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
Isoform_187055_11	chr9	-	4165	6	FSM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	-4	-3367	-4	-2458	multi-exon	FALSE	canonical	3	18	junction_5	143.058869001541	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACTGATGTCTGTTTC	9707	False	NA	-5	True	TATAAA	-19	NA	45896696	45876614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896599
Isoform_187057_7	chr9	-	4399	7	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-19	-2459	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	171.694253446837	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTACTGATGTCTGTTT	4109	False	NA	-6	True	TATAAA	-18	NA	45896152	45876615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45892340_45892523_45896002
Isoform_18706_3	chr11	-	988	7	FSM	ENSMUSG00000039450.12	ENSMUST00000122883.2	914	7	-45	-29	7	-1	multi-exon	FALSE	canonical	3	81	junction_2	12.5786415094088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTGTGTGCTGATTCT	9991	False	NA	-31	True	AATAAA	-10	NA	120618100	120616251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
Isoform_187061_507	chr9	-	1056	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	19	2	1	-2	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCGGCACCCTCTGC	NA	False	NA	-3	True	AATAAA	-24	NA	48391892	48379813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
Isoform_187065_31	chr9	-	1170	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	-93	0	-81	0	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	-1	True	AATAAA	-26	NA	48392004	48379811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
Isoform_18707_57	chr11	-	2137	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	-16	-3	-16	1	multi-exon	FALSE	canonical	3	122	junction_3	23.1137382947714	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	NA	False	NA	-3	True	AGTAAA	-20	NA	120675049	120671570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_187072_18	chr9	-	1994	3	FSM	ENSMUSG00000032026.8	ENSMUST00000214161.2	553	3	0	-1441	0	11	multi-exon	FALSE	canonical	3	1141	junction_1	21.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTTAGTGTTAGTAGT	NA	False	NA	1	True	AATAAA	-26	NA	48391893	48384774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_48386498_48390609_48390694_48391706
Isoform_187073_8	chr9	-	2736	4	ISM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	1	-2	1	2	intron_retention	FALSE	canonical	3	400	junction_3	16.8588914885357	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGAATGTGTCTCTT	NA	False	NA	-10	True	ATTAAA	-6	NA	48406593	48400006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318
Isoform_187075_6	chr9	-	2649	5	ISM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-13	-2	-8	2	intron_retention	FALSE	canonical	0	0	junction_4	180.004687438966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGAATGTGTCTCTT	NA	False	NA	-10	True	ATTAAA	-6	NA	48406607	48400006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582
Isoform_187076_72	chr9	-	1879	6	FSM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-9	-3	-4	3	multi-exon	FALSE	canonical	0	0	junction_4	182.483314305719	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGAATGTGTCTCTTT	NA	False	NA	-9	True	ATTAAA	-7	NA	48406603	48400005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582_48405688_48406454
Isoform_187078_198	chr9	-	1763	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	4	6	1	2	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGAATGTGTCTCTT	NA	False	NA	-10	True	ATTAAA	-6	NA	48406593	48400006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
Isoform_187083_10	chr9	-	1027	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	0	16	0	-2	multi-exon	FALSE	canonical	3	43	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCTGTGTCTCTGAATG	NA	False	NA	-6	True	ATTAAA	-17	NA	48516453	48503192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_48503663_48514653_48514862_48516104
Isoform_187084_18	chr9	-	890	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	140	13	64	1	multi-exon	FALSE	canonical	3	43	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTCTCTGAATGCAG	NA	False	NA	-3	True	ATTAAA	-20	NA	48516313	48503189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_48503663_48514653_48514862_48516104
Isoform_187085_3	chr9	-	2126	9	FSM	ENSMUSG00000032269.9	ENSMUST00000217289.2	1987	9	-139	0	-61	0	multi-exon	FALSE	canonical	1	1	junction_3	0.927024810886958	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTGTGACCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	48822460	48810512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_48811291_48811860_48812083_48812173_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820062_48822198
Isoform_187087_53	chr9	-	2276	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	48	1304	38	-1304	multi-exon	FALSE	canonical	3	14	junction_3	5.49706167646225	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGATGTCTGCCGGGT	NA	False	NA	-3	True	AATAAA	-24	NA	49397477	49349566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
Isoform_187088_3	chr9	-	2200	21	NIC	ENSMUSG00000040219.5	novel	3628	22	NA	NA	42	-1304	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	7.63544366752843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGATGTCTGCCGGGT	NA	False	NA	-3	True	AATAAA	-24	NA	49397473	49349566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
Isoform_18709_13	chr11	-	2271	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	-152	-1	-152	-1	multi-exon	FALSE	canonical	3	122	junction_3	23.1137382947714	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675185	120671572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_187092_19	chr9	-	6032	18	FSM	ENSMUSG00000039542.17	ENSMUST00000193547.6	6050	18	3	15	0	-3	multi-exon	FALSE	canonical	1	2	junction_5	42.8863469454471	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAGCAACTC	8520	False	NA	-16	True	AATAAA	-7	NA	49710222	49413450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_187094_22	chr9	-	4538	18	FSM	ENSMUSG00000039542.17	ENSMUST00000193547.6	6050	18	3	1509	0	1403	multi-exon	FALSE	canonical	1	2	junction_5	42.8863469454471	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTGTGGAAGGTATAG	8520	False	NA	-28	True	AATAAA	-13	NA	49710222	49414944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_187098_10	chr9	-	4573	18	FSM	ENSMUSG00000039542.17	ENSMUST00000193547.6	6050	18	-32	1509	-32	1403	multi-exon	FALSE	canonical	1	2	junction_5	42.8863469454471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTGTGGAAGGTATAG	8485	False	NA	-28	True	AATAAA	-13	NA	49710257	49414944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_18710_16	chr11	-	2046	7	NIC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	56.0518113494609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675049	120671572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120672730_120672804_120672891_120673208_120673375_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_187100_13	chr9	-	6065	18	FSM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	-80	-2897	-27	-3	multi-exon	FALSE	canonical	1	2	junction_5	47.8331876507352	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAGCAACTC	8490	False	NA	-16	True	AATAAA	-7	NA	49710252	49413450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_187104_3	chr9	-	6191	18	FSM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	-193	-2910	-140	-2	multi-exon	FALSE	canonical	1	2	junction_5	47.8331876507352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTCTAGTCCAACTGGG	8377	False	NA	-3	True	AATAAA	-20	NA	49710365	49413437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_187108_14	chr9	-	2692	14	NIC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	37.2431638618132	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGGTGACGAAATAATTA	8520	False	NA	NA	False	AATAAA	-22	NA	49710222	49442575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_187109_3	chr9	-	2829	14	NIC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	-135	-1	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	37.2431638618132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACGGTGACGAAATAATT	8382	False	NA	NA	False	AATAAA	-21	NA	49710360	49442576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_18711_13	chr11	-	2504	6	FSM	ENSMUSG00000025158.8	ENSMUST00000123273.2	2467	6	-38	1	-16	-1	multi-exon	FALSE	canonical	3	152	junction_3	12.2081939696255	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675049	120671572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_187110_9	chr9	-	5037	14	NIC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	-32	2310	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	37.2431638618132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTTGGTGCTTTCATGC	8485	False	NA	NA	False	AATAAA	-22	NA	49710257	49440265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_187112_17	chr9	-	1137	7	NIC	ENSMUSG00000032067.7	novel	589	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	39.4574313518872	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7955	False	NA	NA	False	AATAAA	-18	NA	50439955	50432916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439445_50439533_50439856
Isoform_187116_33	chr9	-	1050	6	FSM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	-5	1	0	0	multi-exon	FALSE	canonical	3	95	junction_5	16.1294761229248	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGTTTTCAGGATTTAT	7954	False	NA	NA	False	AATAAA	-17	NA	50439956	50432917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439856
Isoform_187119_11	chr9	-	911	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	-16	0	-1	0	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATTTCCATTTGATT	6961	False	NA	NA	False	AATAAA	-21	NA	50472626	50468224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
Isoform_187120_6	chr9	-	1020	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	-17	-108	-2	2	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTATTTTTTTATT	6960	False	NA	NA	False	AATAAA	-17	NA	50472627	50468116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
Isoform_187125_1134	chr9	-	1236	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	7	-12	7	12	multi-exon	FALSE	canonical	3	1351	junction_3	46.783187863448	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTGTACTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	50515105	50507644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
Isoform_187126_18	chr9	-	1292	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	-50	-11	-50	11	multi-exon	FALSE	canonical	3	1351	junction_3	46.783187863448	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTGTACTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	50515162	50507645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
Isoform_187129_17	chr9	-	2878	3	NIC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	7	12	intron_retention	FALSE	canonical	3	1351	junction_2	56.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTGTACTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	50515105	50507644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_50508551_50510060_50511965_50515037
Isoform_187138_10	chr9	-	3408	6	FSM	ENSMUSG00000059820.15	ENSMUST00000147671.2	1225	6	25	-2208	25	-249	multi-exon	FALSE	canonical	3	45	junction_5	31.9023510105447	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGCCTTAGGCTAAGG	131	False	NA	-4	True	AATAAA	-16	NA	50528539	50516792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
Isoform_187140_4	chr9	-	3133	7	FSM	ENSMUSG00000059820.15	ENSMUST00000171462.8	3339	7	205	1	5	-1	multi-exon	FALSE	canonical	2	5	junction_6	47.355921840181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTGCTCTGTTACTT	111	False	NA	-8	True	AATAAA	-12	NA	50528559	50516544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957_50527985_50528527
Isoform_187141_18	chr9	-	3138	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	178	0	-5	0	multi-exon	FALSE	canonical	3	44	junction_5	32.2800247831379	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTGTTACTTTTTAA	84	False	NA	-3	True	AATAAA	-17	NA	50528586	50516539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
Isoform_187145_7	chr9	-	2541	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	16	759	16	-755	multi-exon	FALSE	canonical	3	44	junction_5	32.2800247831379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATATGGTTGGCCAGA	NA	False	NA	NA	False	AATAAA	-13	NA	50528748	50517298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
Isoform_187148_3	chr9	-	3245	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	68	3	68	1	multi-exon	FALSE	canonical	3	44	junction_5	32.2800247831379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGCTCTGTTACTTTT	-26	True	NA	-6	True	AATAAA	-14	NA	50528696	50516542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
Isoform_187155_976	chr9	-	2634	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	253	1148	253	747	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGTTGTAGAAGTGGAGC	NA	False	NA	-1	True	AATAAA	-22	NA	50570827	50547080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
Isoform_187157_145	chr9	-	3642	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	253	140	253	-140	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTTCTCAGGTAAGAC	NA	False	NA	NA	False	AATAAA	-17	NA	50570827	50546072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
Isoform_187158_81	chr9	-	3776	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	253	6	253	-6	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAATGTTTGATCTGTTG	NA	False	NA	-7	True	ATTAAA	-20	NA	50570827	50545938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
Isoform_18716_21	chr11	-	1804	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	1	1	combination_of_known_junctions	TRUE	canonical	1	27	junction_12	269.691737241048	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGAGATCTCTAGTGAT	NA	False	NA	-15	True	AATAAA	-18	NA	120687223	120680025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685805_120686302_120686550_120687044
Isoform_187165_35	chr9	-	3669	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	226	140	226	-140	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTTCTCAGGTAAGAC	NA	False	NA	NA	False	AATAAA	-17	NA	50570854	50546072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
Isoform_18717_30	chr11	-	2322	13	ISM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	5	1	-1	-1	intron_retention	FALSE	canonical	1	287	junction_5	171.834384089901	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687216	120680028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302
Isoform_187178_22	chr9	-	5648	20	FSM	ENSMUSG00000032064.18	ENSMUST00000117646.8	5719	20	72	-1	-20	1	multi-exon	FALSE	canonical	3	25	junction_7	7.12181308422569	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCACTTCTTCATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	50639295	50574054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
Isoform_18718_585	chr11	-	2107	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	197.871304777721	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687214	120680026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
Isoform_187181_3	chr9	-	4139	19	NIC	ENSMUSG00000032064.18	novel	5719	20	NA	NA	15	-1475	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	10.077477638554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCTTTACATCGTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	50639352	50575530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
Isoform_187182_3	chr9	-	5541	19	NIC	ENSMUSG00000032064.18	novel	5719	20	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	10.077477638554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCCACTTCTTCATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	50639279	50574055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
Isoform_187183_4	chr9	-	3895	5	NNC	ENSMUSG00000032064.18	novel	1099	8	NA	NA	2466	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.3458710382775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAATCCACTTCTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	50593228	50574058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593132
Isoform_187186_14	chr9	-	1253	4	FSM	ENSMUSG00000032062.4	ENSMUST00000239417.2	1242	4	-6	-5	-6	5	multi-exon	FALSE	canonical	3	23	junction_3	2.16024689946929	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGATTGTTCCTGGAGCT	2125	False	NA	NA	False	AATAAA	-22	NA	50657827	50650985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
Isoform_187187_6	chr9	-	1302	4	FSM	ENSMUSG00000032062.4	ENSMUST00000034564.4	1257	4	-56	11	-56	-11	multi-exon	FALSE	canonical	3	23	junction_3	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAACAGGCTGGTGATT	2060	False	NA	NA	False	AATAAA	-6	NA	50657892	50651001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
Isoform_187188_5	chr9	-	560	2	FSM	ENSMUSG00000038086.5	ENSMUST00000217159.2	552	2	-8	0	-8	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	False	NA	-7	True	AATAAA	-16	NA	50663662	50662377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50662752_50663476
Isoform_187189_8	chr9	-	843	2	FSM	ENSMUSG00000038086.5	ENSMUST00000042790.5	773	2	-70	0	-9	0	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	False	NA	-7	True	AATAAA	-16	NA	50663663	50662377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50663034_50663476
Isoform_187191_4	chr9	-	1279	4	FSM	ENSMUSG00000037971.11	ENSMUST00000042468.9	2082	4	292	511	0	362	multi-exon	TRUE	canonical	3	19	junction_2	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCCTTAGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	50679460	50674638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50675317_50675523_50675591_50675995_50676227_50679157
Isoform_187192_7	chr9	-	3533	16	FSM	ENSMUSG00000037112.17	ENSMUST00000041375.11	3552	16	16	3	16	-3	multi-exon	FALSE	canonical	2	11	junction_1	12.14907403879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATGTGTGGTACTCTTT	NA	False	NA	NA	False	AAAAAG	-3	NA	50920357	50804103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50804690_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
Isoform_187194_18	chr9	-	4193	16	FSM	ENSMUSG00000037112.17	ENSMUST00000176663.8	4107	16	-96	10	-6	-10	multi-exon	FALSE	canonical	3	21	junction_1	10.4796098315835	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGCAATATGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	50920332	50804110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
Isoform_187196_15	chr9	-	7369	16	FSM	ENSMUSG00000037112.17	ENSMUST00000176663.8	4107	16	-109	-3153	-19	3153	multi-exon	FALSE	canonical	3	21	junction_1	10.4796098315835	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGGTGATATGAAT	NA	False	NA	-4	True	AATAAA	-16	NA	50920345	50800947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
Isoform_187198_3	chr9	-	4157	16	NNC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	6	-6	intron_retention	FALSE	canonical	3	11	junction_8	13.1969693490589	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAATATGTGTGGTACTC	NA	False	NA	NA	False	NA	NA	NA	50920367	50804106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
Isoform_187199_3	chr9	-	7301	16	NNC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	22	3154	intron_retention	FALSE	canonical	3	11	junction_8	13.1969693490589	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCTGGTGATATGAATA	NA	False	NA	-3	True	AATAAA	-17	NA	50920351	50800946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
Isoform_18720_57	chr11	-	1910	14	FSM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	0	-1	0	0	multi-exon	FALSE	canonical	1	70	junction_13	260.320262471546	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687221	120680026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
Isoform_187200_5	chr9	-	5476	15	FSM	ENSMUSG00000037112.17	ENSMUST00000176824.8	5369	15	-110	3	-20	-3	multi-exon	FALSE	canonical	3	33	junction_7	8.64875831597596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATGTGTGGTACTCTTT	NA	False	NA	NA	False	AAAAAG	-3	NA	50920346	50804103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
Isoform_187202_111	chr9	-	939	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-63	-1	-53	1	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTGTGTTTGGTGATT	974	False	NA	-4	True	AATAAA	-18	NA	51874909	51854604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
Isoform_187207_7	chr9	-	1106	5	NNC	ENSMUSG00000032051.10	novel	875	4	NA	NA	2	278	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	207.452856090245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTTAGCATCTTGTT	1039	False	NA	NA	False	AAGAAA	-3	NA	51874844	51854327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570_51874780_51874824
Isoform_187208_14	chr9	-	1211	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-56	-280	-46	280	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTAGCATCTTGTTTC	981	False	NA	NA	False	AAGAAA	-5	NA	51874902	51854325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
Isoform_18721_703	chr11	-	1829	14	NIC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	178.060258399514	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687216	120680026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
Isoform_187217_460	chr9	-	3162	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-38	4	-38	-4	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTATTGTTTTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	53159391	53009938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
Isoform_18722_21	chr11	-	1876	14	NIC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	178.060258399514	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687263	120680026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
Isoform_187220_15	chr9	-	3246	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-38	-80	-38	80	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTTTTTTGTATTGT	NA	False	NA	77	True	ATTAAA	-17	NA	53159391	53009854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
Isoform_187233_3	chr9	-	1116	7	FSM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-11	138	-11	-138	multi-exon	FALSE	canonical	3	42	junction_1	25.1837690233655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTTCTGTAGAGGA	NA	False	NA	NA	False	ATTAAA	-22	NA	53447984	53433284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
Isoform_187234_17	chr9	-	680	5	ISM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	32	5251	32	96	5prime_fragment	FALSE	canonical	3	85	junction_4	8.07774721070176	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACGACTCAGAGTTTAAT	NA	False	NA	-3	True	AATAAA	-17	NA	53447941	53438397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
Isoform_187235_9	chr9	-	723	5	ISM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-11	5251	-11	96	5prime_fragment	FALSE	canonical	3	85	junction_4	8.07774721070176	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACGACTCAGAGTTTAAT	NA	False	NA	-3	True	AATAAA	-17	NA	53447984	53438397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
Isoform_187236_37	chr9	-	2204	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	30	1171	-22	794	multi-exon	FALSE	canonical	3	149	junction_5	11.4912830779187	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAAATATGGTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	53521652	53492992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
Isoform_187238_237	chr9	-	1545	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	30	1830	-22	135	multi-exon	FALSE	canonical	3	149	junction_5	11.4912830779187	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAACAGTTGGATACTCT	NA	False	NA	-3	True	AATAAA	-36	NA	53521652	53493651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
Isoform_187252_151	chr9	-	5927	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	24	-2366	0	-76	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTCATCTATCCAGA	NA	False	NA	-19	True	AATAAA	-12	NA	53578787	53525957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
Isoform_187266_12	chr9	-	5991	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	-41	-2365	-41	-77	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCATCTATCCAG	NA	False	NA	-20	True	AATAAA	-11	NA	53578852	53525958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
Isoform_187275_18	chr9	-	5562	19	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	84	-71	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	82.5942222891865	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53581230	53525952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
Isoform_187289_5	chr9	-	2913	2	FSM	ENSMUSG00000055069.4	ENSMUST00000068449.4	2971	2	90	-32	90	32	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGAATATTTATATTGT	NA	False	NA	NA	False	CATAAA	-17	NA	53617442	53595377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_53598037_53617188
Isoform_187290_4	chr9	-	2999	2	FSM	ENSMUSG00000055069.4	ENSMUST00000068449.4	2971	2	-1	-27	-1	27	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTTTTGAATATTTAT	NA	False	NA	NA	False	CATAAA	-12	NA	53617533	53595382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_53598037_53617188
Isoform_187291_7	chr9	-	2767	13	ISM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-147	22157	-92	1	5prime_fragment	TRUE	canonical	3	29	junction_1	10.0950345329881	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTGGTTGGTAGTTGG	6840	False	NA	NA	False	AATAAA	-19	NA	54409002	54352613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
Isoform_187292_10	chr9	-	2712	13	ISM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-93	22158	-38	0	5prime_fragment	FALSE	canonical	3	29	junction_1	10.0950345329881	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTGGTTGGTAGTTG	6894	False	NA	NA	False	AATAAA	-18	NA	54408948	54352614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
Isoform_187293_6	chr9	-	2794	13	ISM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-174	22157	-119	1	5prime_fragment	FALSE	canonical	3	29	junction_1	10.0950345329881	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTGGTTGGTAGTTGG	6813	False	NA	NA	False	AATAAA	-19	NA	54409029	54352613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
Isoform_187294_3	chr9	-	921	6	FSM	ENSMUSG00000037493.7	ENSMUST00000041901.7	1433	6	21	491	21	-491	multi-exon	FALSE	canonical	1	2	junction_1	2.4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATCTAACTGCAACAG	6937	False	NA	NA	False	NA	NA	NA	54467481	54452568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_54452769_54453172_54453369_54455616_54455765_54457064_54457177_54461770_54461806_54467251
Isoform_187295_6	chr9	-	2707	14	FSM	ENSMUSG00000032281.12	ENSMUST00000034822.12	2880	14	166	7	-9	-7	multi-exon	FALSE	canonical	0	0	junction_5	2.25320284859643	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTACCGGATGTCTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	54568988	54512167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_54512761_54516299_54516547_54516978_54517119_54522019_54522238_54523150_54523382_54525305_54525488_54529149_54529327_54529720_54529871_54529959_54530041_54534714_54534836_54535153_54535243_54535689_54535911_54549879_54549981_54568832
Isoform_187300_46	chr9	-	1252	11	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	105	junction_9	332.004593341719	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTGTGAACGTGCTG	5460	False	NA	-2	True	AATAAA	-20	NA	54641764	54624441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641652
Isoform_187301_28	chr9	-	1179	11	FSM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	-15	-2	5	2	multi-exon	FALSE	canonical	3	105	junction_9	343.30050975785	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5428	False	NA	-1	True	AATAAA	-21	NA	54641796	54624440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641758
Isoform_187303_379	chr9	-	1263	11	FSM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	34	-7	-3	2	multi-exon	FALSE	canonical	3	544	junction_10	185.351584832717	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5455	False	NA	-1	True	AATAAA	-21	NA	54641769	54624440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
Isoform_187304_447	chr9	-	1184	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	5	-2	5	2	multi-exon	FALSE	canonical	3	455	junction_10	209.060852385137	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5428	False	NA	-1	True	AATAAA	-21	NA	54641796	54624440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
Isoform_187318_2215	chr9	-	1316	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	81	-5	-42	5	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCAGAAACATGCCTAGC	NA	False	NA	-8	True	AATAAA	-35	NA	55419446	55361786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
Isoform_187319_64	chr9	-	1361	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	42	-11	42	11	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATGCCTAGCTTCTTA	NA	False	NA	-2	True	AATAAA	-41	NA	55419485	55361780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
Isoform_187321_26	chr9	-	1388	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	81	-77	-42	77	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTGGCAGTCACCTT	NA	False	NA	64	True	AATAAA	-42	NA	55419446	55361714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
Isoform_187333_41	chr9	-	4882	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	-21	370	-3	-366	multi-exon	FALSE	canonical	3	40	junction_24	10.0574521500229	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTATCAAGTATTTTCT	NA	False	NA	-5	True	AATAAA	-15	NA	55845406	55457532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
Isoform_187336_4	chr9	-	4960	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	-97	368	-79	-364	multi-exon	FALSE	canonical	3	40	junction_24	10.0574521500229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATCAAGTATTTTCTTA	NA	False	NA	-3	True	AATAAA	-17	NA	55845482	55457530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
Isoform_187341_186	chr9	-	1711	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	5	0	5	0	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	False	NA	-3	True	AATAAA	-17	NA	56068336	56043167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
Isoform_187342_737	chr9	-	1686	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	28	2	28	-2	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGTACATTTTAATTA	NA	False	NA	-5	True	AATAAA	-15	NA	56068313	56043169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
Isoform_187347_3	chr9	-	7535	4	ISM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	160414	-3997	-13588	-6	3prime_fragment	FALSE	canonical	3	41	junction_2	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACCAGACTTGAAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	56164937	56108415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810
Isoform_187348_7	chr9	-	7034	7	FSM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	-37	-1	-37	1	multi-exon	FALSE	canonical	3	31	junction_4	5.42883249163411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGTGAGAACTGCAGAAG	NA	False	NA	-7	True	NA	NA	NA	56325388	56112411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325224
Isoform_187350_3	chr9	-	11032	7	FSM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	-37	-3999	-37	-4	multi-exon	FALSE	canonical	3	31	junction_4	5.42883249163411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAGACTTGAAGTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	56325388	56108413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325224
Isoform_187352_14	chr9	-	2825	2	FSM	ENSMUSG00000049556.6	ENSMUST00000114256.2	2782	2	-68	25	-68	-8	multi-exon	FALSE	canonical	3	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCTATAGCTAGTCGG	6155	False	NA	NA	False	AATAAA	-12	NA	56542980	56526396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_56528600_56542358
Isoform_187354_3	chr9	-	3457	2	FSM	ENSMUSG00000049556.6	ENSMUST00000114256.2	2782	2	-60	-615	-60	2	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGACTGCTCTCATT	6163	False	NA	-14	True	NA	NA	NA	56542972	56525756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_56528600_56542358
Isoform_187355_5	chr9	-	3415	2	FSM	ENSMUSG00000049556.6	ENSMUST00000114256.2	2782	2	-18	-615	-18	2	multi-exon	TRUE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGACTGCTCTCATT	6205	False	NA	-14	True	NA	NA	NA	56542930	56525756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_56528600_56542358
Isoform_187357_5	chr9	-	4555	3	NNC	ENSMUSG00000032733.7	novel	4571	2	NA	NA	-16	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGTGTAATAGAAGCAC	NA	False	NA	NA	False	GATAAA	-13	NA	56835671	56824487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_56825989_56832596_56834206_56834226
Isoform_187358_29	chr9	-	1712	10	FSM	ENSMUSG00000032298.14	ENSMUST00000190245.7	1693	10	-18	-1	-18	1	multi-exon	FALSE	canonical	3	40	junction_9	6.09391520035648	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGGTACTTCTTGGG	NA	False	NA	-10	True	AATAAA	-6	NA	57055429	57050082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
Isoform_187359_7	chr9	-	1716	10	NNC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	-16	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.1010071178409	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTCTTGGGCAGGCTAC	NA	False	NA	-2	True	AATAAA	-14	NA	57055427	57050074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052500_57053884_57054342_57055367
Isoform_187362_10	chr9	-	1067	8	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	1	-1	intron_retention	TRUE	non_canonical	0	0	junction_6	457.441643428817	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGGGTCTTGCTTG	6293	False	NA	-5	True	AATAAA	-14	NA	57065599	57062323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064033_57064041_57064065_57064423_57065555
Isoform_187363_9	chr9	-	2169	6	ISM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	-2	0	-2	0	intron_retention	FALSE	canonical	3	898	junction_5	102.766531516832	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTCTTGCTTGCTTTT	6329	False	NA	0	True	AATAAA	-19	NA	57065563	57062318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058
Isoform_187364_14	chr9	-	1935	7	FSM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	0	6	0	0	multi-exon	FALSE	canonical	3	898	junction_5	106.241470245851	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6331	False	NA	-6	True	AATAAA	-13	NA	57065561	57062324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350
Isoform_187366_325	chr9	-	842	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	15	1	0	-1	multi-exon	FALSE	canonical	3	701	junction_7	157.218553197095	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGGGTCTTGCTTG	6292	False	NA	-5	True	AATAAA	-14	NA	57065600	57062323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
Isoform_187368_17	chr9	-	1046	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	701	junction_6	167.641151140033	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGGGTCTTGCTTG	6314	False	NA	-5	True	AATAAA	-14	NA	57065578	57062323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064423_57065555
Isoform_187369_18	chr9	-	776	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	406.295322258193	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGGGTCTTGCTTG	6292	False	NA	-5	True	AATAAA	-14	NA	57065600	57062323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064350_57064423_57065555
Isoform_187370_17	chr9	-	1262	7	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	417.286871748122	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGGGTCTTGCTTG	6292	False	NA	-5	True	AATAAA	-14	NA	57065600	57062323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57064047_57064071_57064423_57065555
Isoform_187381_9	chr9	-	1675	5	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	476.136206877822	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGGGTCTTGCTTG	6292	False	NA	-5	True	AATAAA	-14	NA	57065600	57062323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_57062565_57062695_57062873_57063185_57064047_57064071_57064423_57065555
Isoform_187384_85	chr9	-	4109	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	40	3	-25	-3	multi-exon	FALSE	canonical	3	41	junction_1	39.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGATCTAGCTTTG	NA	False	NA	-10	True	ATTAAA	-18	NA	57169855	57160402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57161613_57163668_57166424_57169711
Isoform_187386_17	chr9	-	3704	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	8	440	-3	53	multi-exon	FALSE	canonical	3	41	junction_1	39.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTGTCAAGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	57169887	57160839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57161613_57163668_57166424_57169711
Isoform_187389_6	chr9	-	1211	5	NIC	ENSMUSG00000063849.7	novel	2744	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	55.6169938058504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347379	57321243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57322010_57322368_57322538_57342185_57342369_57344699_57344766_57347352
Isoform_187391_4	chr9	-	1875	7	NIC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	728	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	40.1306892816735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGACTGTGTCCTTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	57346646	57321245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57346396
Isoform_187394_112	chr9	-	1653	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	12	0	1	0	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347378	57321243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
Isoform_187398_9	chr9	-	2146	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	11	-492	0	492	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATGGTTCAGTGTGTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	57347379	57320751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
Isoform_187399_10	chr9	-	1428	5	NIC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	57.2996509587973	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347379	57321244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57322010_57322368_57322756_57342185_57342369_57344699_57344766_57347352
Isoform_187402_12	chr9	-	3342	7	FSM	ENSMUSG00000040722.8	ENSMUST00000214256.2	1025	7	2	-2319	0	0	multi-exon	FALSE	canonical	3	62	junction_6	45.7262385167301	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375341	57348609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375098
Isoform_187403_45	chr9	-	3302	7	FSM	ENSMUSG00000040722.8	ENSMUST00000214256.2	1025	7	42	-2319	19	0	multi-exon	FALSE	canonical	3	62	junction_6	45.7262385167301	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375301	57348609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375098
Isoform_187405_141	chr9	-	3195	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	30	0	9	0	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375311	57348609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
Isoform_187406_26	chr9	-	3271	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	-46	0	-44	0	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375387	57348609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
Isoform_187408_56	chr9	-	3189	6	NIC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_5	39.9669863762581	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375345	57348609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375098
Isoform_187409_60	chr9	-	3145	6	NIC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_5	39.9669863762581	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375301	57348609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375098
Isoform_187410_215	chr9	-	3047	6	FSM	ENSMUSG00000040722.8	ENSMUST00000215734.2	675	6	0	-2372	0	0	multi-exon	FALSE	canonical	3	101	junction_3	25.4715527598927	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375320	57348609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
Isoform_187411_48	chr9	-	3109	6	FSM	ENSMUSG00000040722.8	ENSMUST00000215734.2	675	6	-62	-2372	-39	0	multi-exon	FALSE	canonical	3	101	junction_3	25.4715527598927	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375382	57348609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
Isoform_187417_319	chr9	-	1747	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	21	12	21	-12	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGAGTGAAGAGCAGTC	8972	False	NA	-20	True	ATTAAA	-18	NA	57460025	57451550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
Isoform_187420_10	chr9	-	1573	7	NIC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	20	-13	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	97.3077877436105	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAGAGTGAAGAGCAGT	8971	False	NA	-21	True	ATTAAA	-17	NA	57460026	57451551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57452222_57452477_57452687_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
Isoform_187425_51	chr9	-	2781	14	NIC	ENSMUSG00000032312.8	novel	2749	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	41.3604447574315	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57552917	57533928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277_57541329_57552277
Isoform_187426_12	chr9	-	2810	14	NIC	ENSMUSG00000032312.8	novel	2749	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	41.3604447574315	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57552946	57533928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277_57541329_57552277
Isoform_187430_474	chr9	-	2731	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	18	0	-18	0	multi-exon	FALSE	canonical	3	100	junction_12	11.433381924095	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57552918	57533928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
Isoform_187437_8	chr9	-	2584	15	NIC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_12	48.2386181986413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCAGCCTCGGCGCTTCC	NA	False	NA	-27	True	AATAAA	-21	NA	57560758	57533930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57559114_57559276_57559849_57559986_57560559
Isoform_187438_20	chr9	-	2446	14	NIC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	43.0998565326625	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57560754	57533928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57559114_57559276_57560559
Isoform_187447_28	chr9	-	2552	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	-57	1	-57	-1	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9011	False	NA	-10	True	AATAAA	-20	NA	57673200	57657992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_187449_42	chr9	-	1837	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	746	-87	0	2	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTGGAAAGCCAAGTG	9814	False	NA	-9	True	AATAAA	-18	NA	57672397	57657904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_187451_310	chr9	-	1749	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	746	1	0	-1	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9814	False	NA	-10	True	AATAAA	-20	NA	57672397	57657992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_187454_12	chr9	-	1860	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	724	-88	-15	3	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTGGAAAGCCAAGTGT	9792	False	NA	-8	True	AATAAA	-19	NA	57672419	57657903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_187455_13	chr9	-	1760	13	NNC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	23	7	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_12	94.4161885836675	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCAGTGTGTCCATCTCC	9848	False	NA	-2	True	AATAAA	-28	NA	57672363	57657984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672319
Isoform_187456_18	chr9	-	3849	12	FSM	ENSMUSG00000032316.9	ENSMUST00000216095.2	3924	12	-11	86	0	-1	multi-exon	FALSE	canonical	3	243	junction_11	42.6560334546315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9814	False	NA	-10	True	AATAAA	-20	NA	57672397	57657992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57668324_57668998_57669151_57672356
Isoform_187458_31	chr9	-	1652	12	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	91.1213884772205	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9814	False	NA	-10	True	AATAAA	-20	NA	57672397	57657992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
Isoform_187464_33	chr9	-	2363	12	FSM	ENSMUSG00000032316.9	ENSMUST00000215233.2	2363	12	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_9	49.1934955049954	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9814	False	NA	-11	True	AATAAA	-19	NA	57672397	57657993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_187466_12	chr9	-	2269	11	NIC	ENSMUSG00000032316.9	novel	2363	12	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	36	junction_8	95.4897376685055	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9812	False	NA	-10	True	AATAAA	-20	NA	57672399	57657992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
Isoform_187481_559	chr9	-	4037	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTATGGGATCCTTTC	NA	False	NA	-4	True	AATAAA	-19	NA	57744061	57697636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
Isoform_187482_14	chr9	-	3932	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-38	1	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	57744114	57697794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
Isoform_187491_30	chr9	-	1919	8	FSM	ENSMUSG00000004661.16	ENSMUST00000098686.4	1969	8	51	-1	19	0	multi-exon	FALSE	canonical	3	208	junction_2	15.8603600340019	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	57744025	57701968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
Isoform_187493_3	chr9	-	4013	4	FSM	ENSMUSG00000051243.15	ENSMUST00000163897.8	4303	4	284	6	185	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGACTCGGTGAGATTT	9541	False	NA	-6	True	AATAAA	-13	NA	58109284	58103586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58107267_58107554_58107745_58108562_58108656_58109234
Isoform_187494_4	chr9	-	4133	4	NIC	ENSMUSG00000051243.15	novel	4303	4	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTGAGATTTTTGGGGT	7161	False	NA	1	True	AATAAA	-20	NA	58111664	58103579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_58107267_58107554_58107745_58108562_58108656_58111501
Isoform_187495_21	chr9	-	3917	2	FSM	ENSMUSG00000051243.15	ENSMUST00000163200.3	4123	2	203	3	56	2	multi-exon	FALSE	canonical	3	11	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCGGTGAGATTTTTGG	NA	False	NA	-2	True	AATAAA	-17	NA	58108795	58103582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58107267_58108562
Isoform_187497_3	chr9	-	3893	3	FSM	ENSMUSG00000051243.15	ENSMUST00000215950.2	4109	3	219	-3	120	-1	multi-exon	FALSE	canonical	2	3	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCGGTGAGATTTTTGGG	9476	False	NA	-1	True	AATAAA	-18	NA	58109349	58103581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58107267_58108562_58108656_58109234
Isoform_187498_16	chr9	-	3837	3	FSM	ENSMUSG00000051243.15	ENSMUST00000215950.2	4109	3	271	1	172	-1	multi-exon	FALSE	canonical	2	3	junction_2	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGACTCGGTGAGATTTT	9528	False	NA	-5	True	AATAAA	-14	NA	58109297	58103585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58107267_58108562_58108656_58109234
Isoform_187499_23	chr9	-	3875	3	FSM	ENSMUSG00000051243.15	ENSMUST00000114144.9	3880	3	0	5	0	-1	multi-exon	FALSE	canonical	2	3	junction_2	4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGACTCGGTGAGATTTT	7223	False	NA	-5	True	AATAAA	-14	NA	58111602	58103585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58107267_58108562_58108656_58111501
Isoform_187501_9	chr9	-	3859	3	NNC	ENSMUSG00000051243.15	novel	4109	3	NA	NA	189	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGACTCGGTGAGATT	9545	False	NA	-7	True	AATAAA	-12	NA	58109280	58103587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_58107267_58108562_58108656_58109193
Isoform_187503_31	chr9	-	4006	9	FSM	ENSMUSG00000036986.17	ENSMUST00000135310.8	4413	9	-49	456	4	0	multi-exon	FALSE	canonical	3	33	junction_1	114.3314807916	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2155	False	NA	-13	True	NA	NA	NA	58157065	58125824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187508_25	chr9	-	3848	8	FSM	ENSMUSG00000036986.17	ENSMUST00000126690.8	4206	8	-96	454	25	1	multi-exon	FALSE	canonical	3	33	junction_1	129.417848814747	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2176	False	NA	-12	True	NA	NA	NA	58157044	58125823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187522_42	chr9	-	4478	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	1	2	1	-2	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	2152	False	NA	-3	True	AGTAAA	-21	NA	58157068	58125360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187523_208	chr9	-	3991	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	25	465	25	1	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2176	False	NA	-12	True	NA	NA	NA	58157044	58125823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187526_111	chr9	-	4455	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	25	1	25	-1	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTGATTGCAATCTCT	2176	False	NA	-2	True	AGTAAA	-22	NA	58157044	58125359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187529_36	chr9	-	5351	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	25	-895	25	895	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATACACACTG	2176	False	NA	NA	False	AATAAA	-11	NA	58157044	58124463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187539_170	chr9	-	3847	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	31	465	-22	1	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2182	False	NA	-12	True	NA	NA	NA	58157038	58125823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187540_89	chr9	-	4286	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	55	2	2	-2	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	2206	False	NA	-3	True	AGTAAA	-21	NA	58157014	58125360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187541_26	chr9	-	5213	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	25	-895	25	895	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATACACACTG	2176	False	NA	NA	False	AATAAA	-11	NA	58157044	58124463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187553_32	chr9	-	2384	8	FSM	ENSMUSG00000036986.17	ENSMUST00000153820.8	2652	8	25	243	25	-243	multi-exon	FALSE	canonical	3	249	junction_3	51.5692520316326	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGACCTTTGGCTGT	2176	False	NA	NA	False	NA	NA	NA	58157044	58128575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187556_20	chr9	-	2231	7	ISM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	24	3233	24	-259	5prime_fragment	FALSE	canonical	3	178	junction_3	76.1389446268392	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGGCAGTAATCTACT	2175	False	NA	NA	False	NA	NA	NA	58157045	58128591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_187563_24	chr9	-	2445	7	FSM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	-11	863	-11	-863	multi-exon	FALSE	canonical	2	7	junction_6	4.22952584681651	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTGTGCCCTGTGGT	9346	False	NA	NA	False	AATAAA	-22	NA	58220480	58195883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
Isoform_187567_190	chr9	-	3284	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	319	0	319	0	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGCCTGTGATGCCT	421	False	NA	-3	True	AATAAA	-19	NA	58462401	58431580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
Isoform_187568_72	chr9	-	3344	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	259	0	259	0	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGCCTGTGATGCCT	361	False	NA	-3	True	AATAAA	-19	NA	58462461	58431580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
Isoform_187569_5	chr9	-	3582	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	18	3	18	-1	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCTGGCCTGTGATG	120	False	NA	-6	True	AATAAA	-16	NA	58462702	58431583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
Isoform_187571_6	chr9	-	3500	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	103	0	103	0	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGCCTGTGATGCCT	205	False	NA	-3	True	AATAAA	-19	NA	58462617	58431580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
Isoform_187572_233	chr9	-	879	6	FSM	ENSMUSG00000074269.11	ENSMUST00000098674.6	883	6	-18	22	-18	0	multi-exon	FALSE	canonical	0	0	junction_3	244.73054570282	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCAATGTTTTATT	9032	False	NA	-5	True	AATAAA	-18	NA	58648860	58560160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58560390_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
Isoform_187573_9	chr9	-	784	5	NIC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	258.205828749081	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCAATGTTTTATT	9043	False	NA	-5	True	AATAAA	-18	NA	58648849	58560160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_58560390_58565039_58565127_58567456_58567655_58619298_58619389_58648669
Isoform_187575_39	chr9	-	5371	28	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	3	63	junction_21	18.8438096795025	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGTTTGTTGCTTTCTG	NA	False	NA	-1	True	AATGAA	-16	NA	58943710	58783822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
Isoform_187576_19	chr9	-	7040	28	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	28	-154	combination_of_known_junctions	FALSE	canonical	3	63	junction_21	18.8438096795025	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	-7	True	AATACA	-13	NA	58943680	58782123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
Isoform_187578_33	chr9	-	5428	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-2	-12	0	12	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACTTGTTTGTTGCTTT	NA	False	NA	-4	True	AATGAA	-13	NA	58943710	58783825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
Isoform_187580_29	chr9	-	7130	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-2	-1714	0	-154	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	-7	True	AATACA	-13	NA	58943710	58782123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
Isoform_187582_3	chr9	-	7312	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-22	-1876	-6	8	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTCTTCCTGTCC	NA	False	NA	3	True	AATAAA	-27	NA	58943730	58781961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
Isoform_187583_6	chr9	-	5521	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-91	-16	-75	16	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTTGTTGCTTTCTGT	NA	False	NA	0	True	AATGAA	-17	NA	58943799	58783821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
Isoform_187586_4	chr9	-	7191	28	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	3	-152	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	30.3143114055806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACTGGTCTGGTCAAAA	NA	False	NA	-5	True	AATACA	-15	NA	58943721	58782121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
Isoform_187588_3	chr9	-	2189	7	ISM	ENSMUSG00000032340.9	ENSMUST00000217545.2	3639	15	-21	43115	-7	-36802	5prime_fragment	FALSE	canonical	3	118	junction_6	6.77413381096719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGGAAAAAAATAAA	NA	False	NA	NA	False	AAAAAG	-5	NA	58943731	58862696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
Isoform_187591_166	chr9	-	2444	16	FSM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	62	12	3	-12	multi-exon	TRUE	canonical	3	108	junction_2	13.5581054068119	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	False	NA	-30	True	ATTAAA	-9	NA	59260729	59229284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
Isoform_187600_303	chr9	-	5176	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-56	1851	-52	-1851	multi-exon	TRUE	canonical	3	295	junction_6	43.7741649239926	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTACTTATGTT	NA	False	NA	-8	True	AATAAA	-20	NA	59393953	59297391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
Isoform_187625_9	chr9	-	5108	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	-1851	combination_of_known_splicesites	FALSE	canonical	3	22	junction_12	108.59593173268	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTACTTATGTT	NA	False	NA	-8	True	AATAAA	-20	NA	59393953	59297391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59393261
Isoform_187630_3	chr9	-	1625	4	FSM	ENSMUSG00000051705.14	ENSMUST00000217093.2	1663	4	18	20	2	-20	multi-exon	FALSE	canonical	2	3	junction_2	6.59966329107444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAACAAAACC	6447	False	NA	-42	True	NA	NA	NA	59657903	59643772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59645152_59647222_59647316_59657544_59657655_59657860
Isoform_187631_7	chr9	-	1533	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	0	2037	0	-20	multi-exon	FALSE	canonical	3	14	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAACAAAACC	6429	False	NA	-42	True	NA	NA	NA	59657921	59643772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59645152_59647222_59647316_59657860
Isoform_187632_5	chr9	-	3748	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	13	-191	2	-3	multi-exon	FALSE	canonical	3	14	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGGTCTCTGTCTCC	6442	False	NA	-7	True	AATAAA	-15	NA	59657908	59641544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59645152_59647222_59647316_59657860
Isoform_187633_3	chr9	-	3764	3	FSM	ENSMUSG00000051705.14	ENSMUST00000213257.2	764	3	-3	-2997	2	-6	multi-exon	FALSE	canonical	1	1	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGTGTGGTCTCTGTC	6442	False	NA	-10	True	AATAAA	-12	NA	59657908	59641547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59645152_59647222_59647335_59657860
Isoform_187634_4	chr9	-	1550	3	FSM	ENSMUSG00000051705.14	ENSMUST00000216329.2	1559	3	-11	20	0	-20	multi-exon	FALSE	canonical	2	5	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAACAAAACC	6429	False	NA	-42	True	NA	NA	NA	59657921	59643772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59645152_59657544_59657655_59657860
Isoform_187636_36	chr9	-	1427	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	24	2231	2	-20	multi-exon	FALSE	canonical	3	38	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAACAAAACC	6442	False	NA	-42	True	NA	NA	NA	59657908	59643772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59645152_59657860
Isoform_187637_13	chr9	-	3654	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	24	4	2	-4	multi-exon	FALSE	canonical	3	38	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGGTCTCTGTCTC	6442	False	NA	-8	True	AATAAA	-14	NA	59657908	59641545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59645152_59657860
Isoform_187638_3	chr9	-	1909	6	ISM	ENSMUSG00000032292.9	ENSMUST00000034831.3	2037	8	706	54	-17	-54	intron_retention	FALSE	canonical	2	5	junction_4	3.16227766016838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTTGCTGTATTTTAT	NA	False	NA	1	True	NA	NA	NA	59856694	59850107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_59850803_59854244_59854351_59854595_59854837_59855645_59855804_59855885_59856108_59856207
Isoform_187640_4	chr9	-	2006	8	FSM	ENSMUSG00000032292.9	ENSMUST00000034831.3	2037	8	-27	58	-27	-58	multi-exon	TRUE	canonical	1	3	junction_6	3.8438925848782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCACTTTGCTGTATT	NA	False	NA	-3	True	NA	NA	NA	59857427	59850111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_59850803_59854244_59854351_59854595_59854837_59855645_59855804_59855885_59856108_59856207_59856312_59856464_59856592_59857070
Isoform_187642_4	chr9	-	3801	18	NIC	ENSMUSG00000032289.16	novel	8796	18	NA	NA	-32	-2225	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	5.36359637649641	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGAGTGCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	60429361	59879226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381_60301830_60335446_60335809_60389705_60389779_60404380_60404489_60429148
Isoform_187644_3	chr9	-	2090	9	ISM	ENSMUSG00000047766.16	ENSMUST00000053171.14	3086	10	-30	18066	-30	1	5prime_fragment	FALSE	canonical	3	10	junction_2	5.65132727772866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCCAGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	60557114	60494520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762
Isoform_187645_6	chr9	-	1979	9	ISM	ENSMUSG00000047766.16	ENSMUST00000053171.14	3086	10	81	18066	-10	1	5prime_fragment	FALSE	canonical	3	10	junction_2	5.65132727772866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCCAGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	60557003	60494520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762
Isoform_187646_8	chr9	-	2996	17	FSM	ENSMUSG00000047766.16	ENSMUST00000065603.12	3017	17	10	11	10	-1	multi-exon	FALSE	canonical	1	5	junction_10	6.23372881989584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGTCCAGTTT	3505	False	NA	NA	False	AATAAA	-10	NA	60595431	60494522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60595094
Isoform_187647_10	chr9	-	2825	17	FSM	ENSMUSG00000047766.16	ENSMUST00000065603.12	3017	17	192	0	-63	0	multi-exon	FALSE	canonical	1	5	junction_10	6.23372881989584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	3687	False	NA	NA	False	AATAAA	-21	NA	60595249	60494511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60595094
Isoform_187649_10	chr9	-	2801	16	FSM	ENSMUSG00000047766.16	ENSMUST00000114034.9	2779	16	-31	9	9	1	multi-exon	FALSE	canonical	1	5	junction_10	6.23965811029205	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCCAGTTTGT	3504	False	NA	NA	False	AATAAA	-12	NA	60595432	60494520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60592317_60592406_60594421_60594479_60595094
Isoform_187652_6565	chr9	-	497	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	3	-1	3	1	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	6565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGACTGGTCTCACTTGT	NA	False	NA	-27	True	AATAAA	-15	NA	61821821	61820564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_61820804_61821169_61821245_61821638
Isoform_187653_95	chr9	-	529	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	-29	-1	-29	1	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGACTGGTCTCACTTGT	NA	False	NA	-27	True	AATAAA	-15	NA	61821853	61820564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_61820804_61821169_61821245_61821638
Isoform_187660_16	chr9	-	3402	24	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_17	70.6780554601603	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGGTGGCCATTC	NA	False	NA	-2	True	AATAAA	-19	NA	61854017	61824560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_187665_120	chr9	-	3413	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	-14	-1	-14	1	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGGTGGCCATTC	NA	False	NA	-2	True	AATAAA	-19	NA	61854070	61824560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_187671_45	chr9	-	3129	23	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_16	70.2958329649162	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGGTGGCCATTC	NA	False	NA	-2	True	AATAAA	-19	NA	61854056	61824560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_187673_199	chr9	-	3087	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	37.7146464629211	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGGTGGCCATTC	NA	False	NA	-2	True	AATAAA	-19	NA	61854056	61824560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_187677_7	chr9	-	3010	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-26	-102	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	37.7146464629211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCATTTTAGGAAGGTA	NA	False	NA	-105	True	AATAAA	-21	NA	61854082	61824663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_187686_8	chr9	-	2129	16	ISM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	39	7564	1	0	5prime_fragment	FALSE	canonical	3	228	junction_6	22.0860941670445	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGACTGAGTTGTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	61854017	61832125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_187693_417	chr9	-	4895	5	FSM	ENSMUSG00000032252.15	ENSMUST00000185675.7	4850	5	-52	7	-7	-7	multi-exon	FALSE	canonical	3	145	junction_3	11.5974135047432	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGTACTTGGATAT	NA	False	NA	NA	False	AATAAA	-14	NA	62029944	61964536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995802_62029766
Isoform_187694_26	chr9	-	4945	5	FSM	ENSMUSG00000032252.15	ENSMUST00000185675.7	4850	5	-102	7	-57	-7	multi-exon	FALSE	canonical	3	145	junction_3	11.5974135047432	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGTACTTGGATAT	NA	False	NA	NA	False	AATAAA	-14	NA	62029994	61964536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995802_62029766
Isoform_187695_11	chr9	-	4792	4	NIC	ENSMUSG00000032252.15	novel	4850	5	NA	NA	4	-8	combination_of_known_junctions	FALSE	canonical	1	13	junction_3	71.2101740546173	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATGTACTTGGATA	NA	False	NA	NA	False	AATAAA	-13	NA	62029933	61964537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_61968318_61975666_61975913_61977296_61977896_62029766
Isoform_187696_5	chr9	-	1949	3	FSM	ENSMUSG00000032252.15	ENSMUST00000185510.2	1922	3	-24	-3	22	3	multi-exon	FALSE	canonical	3	22	junction_1	70	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATATGGTGTCTGTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	62029915	61987598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_61989308_61995710_61995802_62029766
Isoform_187697_7	chr9	-	1537	2	FSM	ENSMUSG00000046846.5	ENSMUST00000056949.5	3042	2	-17	1522	-17	-1522	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTGTAGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	62189507	62179532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_62180846_62189283
Isoform_187699_92	chr9	-	3361	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	253	-4	169	4	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAAGCCATGTTTTCA	9611	False	NA	-3	True	AATAAA	-23	NA	62444073	62326769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
Isoform_1877_50	chr10	-	2726	12	FSM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	1	0	1	0	multi-exon	FALSE	canonical	3	28	junction_7	20.4676725553911	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294534	34179604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
Isoform_187700_24	chr9	-	3609	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	0	1	0	-1	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGTATCAAGCCATGT	9358	False	NA	-8	True	AATAAA	-18	NA	62444326	62326774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
Isoform_187701_36	chr9	-	3545	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	64	1	-20	-1	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGTATCAAGCCATGT	9422	False	NA	-8	True	AATAAA	-18	NA	62444262	62326774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
Isoform_187704_24	chr9	-	3252	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	12639	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	15.3332135580422	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCCATGTATCAAGCCA	NA	False	NA	-11	True	AATAAA	-15	NA	62405141	62326777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62405103
Isoform_187705_3	chr9	-	3340	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	10403	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	17.8399681280522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGTATCAAGCCATGT	NA	False	NA	-8	True	AATAAA	-18	NA	62407377	62326774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62407254
Isoform_187706_3	chr9	-	3848	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	-2817	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.119894550256	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCATGTATCAAGCCAT	5239	False	NA	-10	True	AATAAA	-16	NA	62430535	62326776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62429902
Isoform_187707_187	chr9	-	6776	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	-2	11	-2	-11	multi-exon	FALSE	canonical	3	242	junction_1	0	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTACCTTGAAGT	NA	False	NA	-16	True	AGTAAA	-7	NA	62719218	62699113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_62705011_62718339
Isoform_187727_37	chr9	-	4568	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTGTTCTGTAAAAT	NA	False	NA	-1	True	AATAAA	-16	NA	62888164	62785650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
Isoform_187741_6	chr9	-	4543	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-24	1045	-20	-926	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCCCGTTGTTGTCG	NA	False	NA	NA	False	ATTAAA	-18	NA	62888185	62786694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
Isoform_187746_67	chr9	-	2279	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	29	2	4	-2	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCGTTTGTCTCAGCAA	NA	False	NA	-3	True	AATAAA	-16	NA	63285155	63071051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
Isoform_187747_101	chr9	-	2088	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	222	0	197	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63284962	63071049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
Isoform_187748_10	chr9	-	2384	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	-74	0	-74	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63285258	63071049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
Isoform_187751_12	chr9	-	2025	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	190	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_19	18.5973116336744	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCGTTTGTCTCAGCAA	NA	False	NA	-3	True	AATAAA	-16	NA	63284969	63071051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
Isoform_187752_8	chr9	-	2236	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_19	18.5973116336744	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63285178	63071049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
Isoform_187753_3	chr9	-	2064	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	194	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	19.7661326515836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63284965	63071049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
Isoform_187754_3	chr9	-	2500	19	ISM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	1	52503	1	0	5prime_fragment	FALSE	canonical	3	66	junction_16	8.30309328050043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63285183	63123552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
Isoform_187756_48	chr9	-	608	2	FSM	ENSMUSG00000032403.9	ENSMUST00000168665.3	595	2	-13	0	-8	0	multi-exon	FALSE	canonical	3	56	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTAGAGTGTGT	NA	False	NA	-11	True	AATAAA	-15	NA	63306536	63301728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_63301958_63306157
Isoform_187757_14	chr9	-	5368	9	FSM	ENSMUSG00000032402.13	ENSMUST00000034973.10	5090	9	-277	-1	-277	1	multi-exon	FALSE	canonical	3	17	junction_3	5.14174095030078	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCTGCTGTCTCTGG	2006	False	NA	-1	True	AATAAA	-41	NA	63665553	63554047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63664753
Isoform_187760_30	chr9	-	5328	9	FSM	ENSMUSG00000032402.13	ENSMUST00000034973.10	5090	9	-237	-1	-237	1	multi-exon	FALSE	canonical	3	17	junction_3	5.14174095030078	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCTGCTGTCTCTGG	2046	False	NA	-1	True	AATAAA	-41	NA	63665513	63554047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63664753
Isoform_187767_8	chr9	-	2995	4	FSM	ENSMUSG00000036867.8	ENSMUST00000041029.6	2971	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	34	junction_3	8.65383665716478	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTCTTTCTTACAAA	NA	False	NA	NA	False	AATAAA	-15	NA	63929365	63860357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486
Isoform_187768_21	chr9	-	2971	4	FSM	ENSMUSG00000036867.8	ENSMUST00000041029.6	2971	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	8.65383665716478	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTCTTTCTTACAAA	NA	False	NA	NA	False	AATAAA	-15	NA	63929341	63860357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486
Isoform_187786_511	chr9	-	2763	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	193	1	2	-1	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGCCTGGTTTAATCT	NA	False	NA	-1	True	ACTAAA	-19	NA	64080193	64044426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
Isoform_187790_14	chr9	-	2863	20	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_18	406.540652258859	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGCCTGGTTTAATCT	NA	False	NA	-1	True	ACTAAA	-19	NA	64080175	64044426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64074552_64074671_64075894_64075947_64080099
Isoform_187791_13	chr9	-	2659	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	392.146263582254	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080185	64044428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
Isoform_187792_19	chr9	-	3555	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	2	-2	intron_retention	FALSE	canonical	3	273	junction_15	367.010696316977	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080193	64044427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
Isoform_187808_1693	chr9	-	2380	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	34	22	34	-22	multi-exon	TRUE	canonical	3	469	junction_6	51.6454257412987	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAGGGACAAGAGAT	NA	False	NA	-35	True	AATAAA	-16	NA	64160879	64093073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
Isoform_187809_106	chr9	-	2468	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	-56	24	-56	-24	multi-exon	FALSE	canonical	3	469	junction_6	51.6454257412987	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAGGGACAAGAG	NA	False	NA	-37	True	AATAAA	-14	NA	64160969	64093075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
Isoform_187818_51	chr9	-	3199	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	121	255	17	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGTACTTTTTTTTC	5208	False	NA	-3	True	ATTAAA	-13	NA	64248418	64214292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
Isoform_187819_41	chr9	-	3369	17	FSM	ENSMUSG00000032396.18	ENSMUST00000068367.14	3605	17	-17	253	-17	1	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTACTTTTTTTTCT	5039	False	NA	-2	True	ATTAAA	-14	NA	64248587	64214291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
Isoform_187820_21	chr9	-	3536	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	38	1	38	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGCTCAAATTGATTC	5125	False	NA	NA	False	NA	NA	NA	64248501	64214038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
Isoform_187821_33	chr9	-	3485	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	88	2	-13	-1	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGGCTCAAATTGATT	5175	False	NA	NA	False	NA	NA	NA	64248451	64214039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
Isoform_187825_165	chr9	-	2327	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	2	7	2	-7	multi-exon	TRUE	canonical	3	899	junction_3	39.0160223497988	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTGTGGTGAGATT	NA	False	NA	-9	True	AATAAA	-14	NA	64645038	64622587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
Isoform_187826_339	chr9	-	1029	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	2	1305	2	1	multi-exon	FALSE	canonical	3	899	junction_3	39.0160223497988	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGTTTACTCTTCATC	NA	False	NA	-3	True	AATAAA	-21	NA	64645038	64623885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
Isoform_187832_9	chr9	-	3483	3	NIC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	2	-2	intron_retention	FALSE	canonical	3	952	junction_2	28	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTATTGTTTACTCTTC	NA	False	NA	-6	True	AATAAA	-18	NA	64645038	64623888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_64624271_64632783_64635712_64644865
Isoform_187833_4	chr9	-	3149	7	ISM	ENSMUSG00000034452.8	ENSMUST00000037798.8	5213	10	15534	9	15534	-9	3prime_fragment	TRUE	canonical	2	2	junction_6	2.21735578260835	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCCACTGGCATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	64843355	64830151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_64831953_64833450_64833618_64834444_64834535_64835239_64835996_64838461_64838554_64839448_64839533_64843196
Isoform_187835_3	chr9	-	3139	8	NNC	ENSMUSG00000034452.8	novel	5213	10	NA	NA	14930	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	2.39045721866879	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCCACTGGCATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	64843959	64830151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_64831953_64833450_64833618_64834444_64834535_64835239_64835996_64838461_64838554_64839448_64839533_64843196_64843306_64843919
Isoform_187837_848	chr9	-	2725	11	FSM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	-17	1	-17	-1	multi-exon	FALSE	canonical	3	252	junction_1	24.7620677650313	848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTGTGCTTAAACATC	NA	False	NA	-2	True	ATTAAA	-22	NA	64928992	64894265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
Isoform_187846_66	chr9	-	3308	6	FSM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	-36	1	-36	-1	multi-exon	FALSE	canonical	3	13	junction_5	5.23832034148352	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCTGGCCCAAGCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	65487358	65461666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471286_65480261_65480412_65487219
Isoform_187847_4	chr9	-	3458	6	FSM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	-185	0	-185	0	multi-exon	FALSE	canonical	3	13	junction_5	5.23832034148352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGGCCCAAGCCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	65487507	65461665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471286_65480261_65480412_65487219
Isoform_187848_4	chr9	-	7781	10	FSM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	-9	5	-9	-5	multi-exon	FALSE	canonical	2	5	junction_1	3.80058475033046	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATCTGTGAGGGCTGCT	NA	False	NA	-5	True	AATAAA	-19	NA	65734855	65599677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65602977_65603424_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
Isoform_187851_12	chr9	-	4011	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	9	-2021	8	1	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGACTCAGTTTCCTTT	NA	False	NA	NA	False	AGTAAA	-31	NA	65792329	65738416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
Isoform_187854_224	chr9	-	3378	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	9	-1388	8	-9	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAAGAAGGGGTTGG	NA	False	NA	-20	True	AATAAA	-19	NA	65792329	65739049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
Isoform_187858_12	chr9	-	4299	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	17	-2317	16	297	multi-exon	TRUE	canonical	3	144	junction_4	28.3474229673332	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAAATTTTAGTGTAA	NA	False	NA	NA	False	AATAAA	-28	NA	65792321	65738120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
Isoform_187862_19	chr9	-	3289	12	FSM	ENSMUSG00000032386.16	ENSMUST00000122410.8	3915	12	0	626	0	-3	multi-exon	FALSE	canonical	3	24	junction_1	56.3782972135042	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGGGTTGGAAGTTC	NA	False	NA	-14	True	AATAAA	-25	NA	65792337	65739043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65740731_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
Isoform_187865_7	chr9	-	2557	6	NIC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	-43	4	intron_retention	TRUE	canonical	1	2	junction_3	1.85472369909914	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTGTGTGGTCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	65977044	65972453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_65974502_65974794_65974863_65975408_65975504_65975967_65976073_65976455_65976540_65976887
Isoform_187870_644	chr9	-	1951	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	111	11	22	-11	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGTCACAGGACTGG	NA	False	NA	-15	True	AATAAA	-9	NA	66032057	65995425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
Isoform_187871_250	chr9	-	2015	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	47	11	-42	-11	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGTCACAGGACTGG	NA	False	NA	-15	True	AATAAA	-9	NA	66032121	65995425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
Isoform_187872_84	chr9	-	2048	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	20	5	20	-5	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACAGGACTGGGCATGG	NA	False	NA	-9	True	AATAAA	-15	NA	66032148	65995419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
Isoform_187874_13	chr9	-	1931	15	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_14	103.740477802514	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACAGGACTGGGCATG	NA	False	NA	-10	True	AATAAA	-14	NA	66033868	65995420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66033724
Isoform_187876_14	chr9	-	2026	16	NNC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	22	-11	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	132.531187105359	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGTCACAGGACTGG	NA	False	NA	-15	True	AATAAA	-9	NA	66032057	65995425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66023732_66023808_66031888
Isoform_187881_34	chr9	-	3871	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	143	1593	1	4	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTGAGTGTCGTGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	66500281	66423511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_187882_71	chr9	-	2244	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	143	3220	1	20	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTCTGGTCTTCT	NA	False	NA	1	True	NA	NA	NA	66500281	66425138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_187886_6	chr9	-	1890	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	12	3705	12	66	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTTCAGTATGCACTT	NA	False	NA	-11	True	CATAAA	-16	NA	66500412	66425623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_187888_9	chr9	-	3940	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	72	1595	-34	2	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGGTTGAGTGTCGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	66500352	66423513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_187889_8	chr9	-	2093	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	74	630	-4	20	multi-exon	FALSE	canonical	3	10	junction_8	36.8152271043594	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTCTGGTCTTCT	NA	False	NA	1	True	NA	NA	NA	66500244	66425138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_187890_6	chr9	-	1649	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	36	1112	0	69	multi-exon	FALSE	canonical	3	10	junction_8	36.8152271043594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGTATGCACTTTTC	NA	False	NA	-8	True	CATAAA	-19	NA	66500282	66425620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_187894_3	chr9	-	1266	6	FSM	ENSMUSG00000032375.16	ENSMUST00000034934.15	4910	6	5	3639	5	352	multi-exon	FALSE	canonical	1	1	junction_5	4.70744091837593	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCGTAGCCCCTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	66702767	66686122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66686663_66691799_66691928_66696927_66697051_66697879_66697951_66701351_66701523_66702534
Isoform_187895_7	chr9	-	1220	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	57	3928	-21	362	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCGTAGCCCTTGTCT	NA	False	NA	-3	True	AGTAAA	-15	NA	66741951	66726203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
Isoform_187896_4	chr9	-	1277	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	1	3927	1	363	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCGTAGCCCTTGTCTT	NA	False	NA	-2	True	AGTAAA	-16	NA	66742007	66726202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
Isoform_187897_3	chr9	-	3420	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	51	1734	-27	-1734	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTAGTGCTTGTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	66741957	66724009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
Isoform_187898_56	chr9	-	4671	9	NNC	ENSMUSG00000036943.10	novel	4733	8	NA	NA	35	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.1779399272855	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGATTATGACTCTTAA	7786	False	NA	-8	True	AATAAA	-14	NA	66826934	66750952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_66752473_66752492_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
Isoform_187899_9	chr9	-	4784	8	FSM	ENSMUSG00000036943.10	ENSMUST00000041139.9	4733	8	-54	3	-54	-3	multi-exon	FALSE	canonical	2	19	junction_5	12.9992150469455	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGACTCTTAAGTGG	7697	False	NA	-4	True	AATAAA	-18	NA	66827023	66750948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
Isoform_1879_109	chr10	-	2719	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	24	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294524	34179604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
Isoform_187901_3	chr9	-	4664	8	NNC	ENSMUSG00000036943.10	novel	4733	8	NA	NA	6322	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.9795802543455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATGATTATGACTCTT	NA	False	NA	-10	True	AATAAA	-12	NA	66820647	66750954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66820529
Isoform_187902_59	chr9	-	1929	7	NNC	ENSMUSG00000032370.9	novel	2031	6	NA	NA	3	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.8379948821204	59	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGCACTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-12	NA	66882699	66862673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_66862842_66862877_66863483_66874960_66875127_66877863_66878219_66878457_66878649_66881999_66882067_66882322
Isoform_187905_42	chr9	-	1732	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	-125	0	-20	0	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGGTCCTGTCGTC	NA	False	NA	-2	True	AATAAA	-24	NA	66951209	66929873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187906_78	chr9	-	1592	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	14	1	-10	0	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	False	NA	-3	True	AATAAA	-23	NA	66951070	66929874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187909_340	chr9	-	1733	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	-21	2	-21	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGGTCCTGTCGTC	NA	False	NA	-2	True	AATAAA	-24	NA	66951210	66929873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187911_15	chr9	-	1775	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	-65	4	-10	-1	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGGTGGTCCTGTCG	NA	False	NA	-4	True	AATAAA	-22	NA	66951254	66929875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187916_9	chr9	-	1103	9	NIC	ENSMUSG00000032366.16	novel	1208	10	NA	NA	32	-8	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	203.579683416592	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951157	66935255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187918_16	chr9	-	1016	9	NIC	ENSMUSG00000032366.16	novel	1208	10	NA	NA	-10	-8	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	203.579683416592	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951070	66935255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187921_12	chr9	-	1108	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-65	-156	4	0	multi-exon	FALSE	canonical	3	173	junction_1	167.222110903433	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGTACTTTTTTATT	NA	False	NA	1	True	AATAAA	-22	NA	66951080	66935173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187922_49	chr9	-	998	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-37	-74	8	-8	multi-exon	FALSE	canonical	3	173	junction_1	167.222110903433	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951052	66935255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187923_33	chr9	-	1155	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-194	-74	-20	-8	multi-exon	FALSE	canonical	3	173	junction_1	167.222110903433	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951209	66935255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187933_13	chr9	-	2472	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	-15	-8	intron_retention	FALSE	canonical	3	256	junction_1	130.784134343269	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951030	66935255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187935_15	chr9	-	1637	8	ISM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-54	800	-9	0	5prime_fragment	FALSE	canonical	3	256	junction_1	130.784134343269	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGGAAGTTAGTGGT	NA	False	NA	-9	True	AATAAA	-15	NA	66951069	66936129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187936_13	chr9	-	1777	8	ISM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-194	800	-20	0	5prime_fragment	FALSE	canonical	3	256	junction_1	130.784134343269	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGGAAGTTAGTGGT	NA	False	NA	-9	True	AATAAA	-15	NA	66951209	66936129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187938_10	chr9	-	2662	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	-20	3	intron_retention	FALSE	canonical	3	256	junction_1	130.784134343269	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTTTACTCCTTATTT	NA	False	NA	-5	True	AATAAA	-24	NA	66951209	66935244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_187947_10	chr9	-	8716	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74351	0	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_58	17.1195697102182	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGCTGTTTCAGTTTA	NA	False	NA	-7	True	AATAAA	-19	NA	67541336	67127935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
Isoform_187948_10	chr9	-	8453	59	NNC	ENSMUSG00000052698.16	novel	8330	59	NA	NA	-74343	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_58	17.1195697102182	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGTCACAGAGGTCT	NA	False	NA	-6	True	AATAAA	-23	NA	67541328	67128190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
Isoform_187952_39	chr9	-	3659	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	42	2	42	-2	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGTGGCATGGGACT	NA	False	NA	-22	True	AATAAA	-17	NA	70048818	69995794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_187954_56	chr9	-	2299	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	66	1338	66	-1338	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGCCTTGGTTTTT	NA	False	NA	-34	True	NA	NA	NA	70048794	69997130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_187956_163	chr9	-	3593	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	108	2	108	-2	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGTGGCATGGGACT	NA	False	NA	-22	True	AATAAA	-17	NA	70048752	69995794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_187960_9	chr9	-	2504	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	-43	1242	-43	-1242	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGTTGTGGTGTAAGAC	NA	False	NA	62	True	AATAGA	-17	NA	70048903	69997034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_187965_9	chr9	-	1672	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	-23	2054	-23	-2054	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCTAAGTGCAGTTGAG	NA	False	NA	-9	True	AATACA	-16	NA	70048883	69997846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_187966_9	chr9	-	2905	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	1	797	1	-797	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTCTTACTGTTGACC	NA	False	NA	-17	True	AATAAA	-17	NA	70048859	69996589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_187968_9	chr9	-	2725	3	ISM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	114	34211	114	2243	5prime_fragment	FALSE	canonical	3	239	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGATGCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	70048746	70030003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_70032480_70033468_70033566_70048594
Isoform_187973_809	chr9	-	1529	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	2	0	2	0	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328827	70314973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
Isoform_187974_194	chr9	-	1562	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	-30	-1	-30	1	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTATCCTGTGTATATT	NA	False	NA	-7	True	AATAAA	-15	NA	70328859	70314972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
Isoform_187984_59	chr9	-	4888	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	73.562863579113	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTGTTTCATAAT	2211	False	NA	-18	True	AATAAA	-16	NA	70411042	70332710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
Isoform_187985_13	chr9	-	4460	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-65	-457	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	73.562863579113	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2181	False	NA	-1	True	AATAAA	-15	NA	70411072	70333168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
Isoform_187990_44	chr9	-	4814	14	NIC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	148	junction_8	58.7438527565769	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2227	False	NA	-13	True	AATAAA	-21	NA	70411026	70332705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_187995_76	chr9	-	4869	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	71.3097941007676	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTGTTTCATAAT	2233	False	NA	-18	True	AATAAA	-16	NA	70411020	70332710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
Isoform_187997_123	chr9	-	4817	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_8	55.2423386211279	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2227	False	NA	-13	True	AATAAA	-21	NA	70411026	70332705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_188_25	ERCC-00145	+	990	2	Genic_Genomic	ERCC-00145A	novel	1024	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	AAAAAG	-45	NA	0	1023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_ERCC-00145_+_210_242
Isoform_1880_11	chr10	-	1636	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	-29	1136	-29	-480	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTCAGTCTGTCTTTT	NA	False	NA	NA	False	AATGAA	-16	NA	34294577	34180740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
Isoform_188001_13	chr9	-	4914	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	2	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	88.5629028154681	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTGTTTCATAATTA	2211	False	NA	-16	True	AATAAA	-18	NA	70411042	70332708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
Isoform_188003_26	chr9	-	4832	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	79.8840876246409	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2233	False	NA	-13	True	AATAAA	-21	NA	70411020	70332705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_188005_7	chr9	-	4849	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	79.8840876246409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTGTTTCATAAT	2211	False	NA	-18	True	AATAAA	-16	NA	70411042	70332710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_188006_16	chr9	-	4915	15	FSM	ENSMUSG00000032217.14	ENSMUST00000034739.12	4880	15	-35	0	-35	0	multi-exon	FALSE	canonical	3	68	junction_2	86.8932021013645	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTGTTTCATAAT	2211	False	NA	-18	True	AATAAA	-16	NA	70411042	70332710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
Isoform_188010_39	chr9	-	4836	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-13	1	combination_of_known_junctions	TRUE	canonical	3	68	junction_2	77.5959798873276	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTCATAATTAGTGT	2233	False	NA	-12	True	AATAAA	-22	NA	70411020	70332704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_188011_11	chr9	-	4395	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-36	-457	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	77.5959798873276	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2210	False	NA	-1	True	AATAAA	-15	NA	70411043	70333168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_188018_46	chr9	-	2524	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	3	5554	3	-20	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATACA	NA	False	NA	NA	False	NA	NA	NA	70564453	70511849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
Isoform_188019_6	chr9	-	2595	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	-68	5554	-68	-20	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATACA	NA	False	NA	NA	False	NA	NA	NA	70564524	70511849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
Isoform_188022_4	chr9	-	2648	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	-128	5561	-128	-27	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70564584	70511856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
Isoform_188026_17	chr9	-	973	5	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	118050	117	117855	-73	3prime_fragment	FALSE	canonical	3	43	junction_2	8.95823643358446	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGCCTTATTTGGAAG	NA	False	NA	NA	False	AATAAA	-22	NA	70724040	70705526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811
Isoform_188028_13	chr9	-	1056	5	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	118041	43	117846	1	3prime_fragment	FALSE	canonical	3	43	junction_2	8.95823643358446	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGGGTGTGCTTTGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	70724049	70705452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811
Isoform_188041_80	chr9	-	2723	4	FSM	ENSMUSG00000032199.14	ENSMUST00000163972.2	2138	4	-577	-8	370	8	multi-exon	FALSE	canonical	3	31	junction_3	1098.58130736368	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCATGGCGATGTGTTC	2870	False	NA	-25	True	AATAAA	-23	NA	71392817	71385744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392016
Isoform_188042_112	chr9	-	2231	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	-55	24	-55	10	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGGCGATGTGTTCTT	2415	False	NA	-23	True	AATAAA	-25	NA	71393272	71385742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
Isoform_188043_5661	chr9	-	2161	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	15	24	-10	10	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	5661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGGCGATGTGTTCTT	2485	False	NA	-23	True	AATAAA	-25	NA	71393202	71385742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
Isoform_188054_4	chr9	-	2735	10	ISM	ENSMUSG00000032232.15	ENSMUST00000072899.9	6754	19	14	28847	14	-22723	5prime_fragment	FALSE	canonical	1	2	junction_3	7.71882419242596	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGAAAAAGAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	71678870	71562637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_71562680_71563327_71563535_71612429_71612643_71622604_71622741_71623689_71623839_71624677_71624780_71628877_71628984_71630815_71630911_71631759_71633365_71678790
Isoform_188057_16	chr9	-	4801	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	-88	1586	-64	-1	multi-exon	FALSE	canonical	3	53	junction_7	13.3626344707921	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACTAGTGAGTTTTTT	9290	False	NA	-33	True	AATAAA	-24	NA	72019217	71751555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
Isoform_188058_52	chr9	-	4689	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	30	1580	4	0	multi-exon	FALSE	canonical	3	53	junction_7	13.3626344707921	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGAGTTTTTTACACTC	9408	False	NA	-27	True	AATAAA	-30	NA	72019099	71751549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
Isoform_188063_68	chr9	-	4696	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	-80	5	-30	0	multi-exon	FALSE	canonical	3	33	junction_6	15.470103416687	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTAGTGAGTTTTTTA	9324	False	NA	-32	True	AATAAA	-25	NA	72019183	71751554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
Isoform_188066_3	chr9	-	6490	19	NIC	ENSMUSG00000032228.17	novel	4621	20	NA	NA	-35	-2	intron_retention	FALSE	canonical	3	70	junction_15	8.96013117187935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTAAACTAGTGAGT	9319	False	NA	-38	True	AATAAA	-19	NA	72019188	71751560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
Isoform_188070_9	chr9	-	1946	12	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-1	1	intron_retention	FALSE	canonical	3	21	junction_5	58.5026664646243	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	7875	False	NA	-31	True	AATAAA	-15	NA	72399244	72368383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387205_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_188071_74	chr9	-	1281	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	132	1381	-8	2	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGTGAAATAAACAGAAT	7868	False	NA	-30	True	AATAAA	-16	NA	72399251	72368382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_188072_22	chr9	-	2662	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	132	0	-8	0	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGTTTGCTATTTGTA	7868	False	NA	NA	False	NA	NA	NA	72399251	72367001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_188073_4	chr9	-	3793	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	140	-1139	0	-9	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTAAAGTACTAATGTG	7876	False	NA	NA	False	AATAAA	-14	NA	72399243	72365862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_188074_5	chr9	-	4821	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	143	junction_10	32.0663374896479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAAGTTTGCTATT	7879	False	NA	NA	False	NA	NA	NA	72399240	72367005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_188075_17	chr9	-	3444	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	2	1	intron_retention	FALSE	canonical	3	143	junction_10	32.0663374896479	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	7878	False	NA	-31	True	AATAAA	-15	NA	72399241	72368383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_188076_6	chr9	-	3363	10	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	0	1	intron_retention	FALSE	canonical	2	9	junction_5	66.6907363956019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	7876	False	NA	-31	True	AATAAA	-15	NA	72399243	72368383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_188077_12	chr9	-	1146	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-8	2	combination_of_known_splicesites	FALSE	canonical	3	37	junction_2	56.7235400869868	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGTGAAATAAACAGAAT	7868	False	NA	-30	True	AATAAA	-16	NA	72399251	72368382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_72368561_72369137_72369273_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_188078_4	chr9	-	2527	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	37	junction_2	56.7235400869868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTTGCTATTTGT	7867	False	NA	NA	False	NA	NA	NA	72399252	72367002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_72368561_72369137_72369273_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_188085_20	chr9	-	722	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	-16	5	-10	-5	multi-exon	FALSE	canonical	3	81	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTTTTTTTGTTTTTT	NA	False	NA	-4	True	AATAAA	-24	NA	72892674	72887008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_72887479_72892422
Isoform_188087_4	chr9	-	859	3	NNC	ENSMUSG00000086158.3	novel	711	2	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	3.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTTTTTTTGTTTTTT	NA	False	NA	-4	True	AATAAA	-24	NA	72892644	72887008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_72887479_72891080_72891248_72892422
Isoform_188088_4	chr9	-	2200	13	FSM	ENSMUSG00000079469.11	ENSMUST00000184035.8	3221	13	73	948	25	5	multi-exon	FALSE	non_canonical	3	4	junction_1	16.6088580783468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	-6	True	AATAAA	-18	NA	72946908	72921940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_72922474_72923430_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
Isoform_188089_25	chr9	-	3152	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	78	-1037	30	5	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	-6	True	AATAAA	-18	NA	72946903	72921940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
Isoform_188090_5	chr9	-	2162	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	41	-10	-7	10	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGGAAAAAAAGTTTTTG	NA	False	NA	NA	False	AATAAA	-26	NA	72946940	72922967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
Isoform_188091_9	chr9	-	4104	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	78	-1989	30	4	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGGGCTTCACACTAAAGT	NA	False	NA	NA	False	AATAAA	-36	NA	72946903	72920988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
Isoform_188094_3	chr9	-	3096	11	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	35	6	intron_retention	FALSE	non_canonical	3	6	junction_5	16.9752761391384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAAGTTGCTTCTGGTT	NA	False	NA	-5	True	AATAAA	-19	NA	72946898	72921939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
Isoform_188109_11	chr9	-	4327	6	FSM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	-240	2	-16	0	multi-exon	FALSE	canonical	2	3	junction_5	119.229862031288	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACTGCTCAGTCTT	NA	False	NA	-48	True	AATAAA	-16	NA	75316881	75294185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75316483
Isoform_188111_62	chr9	-	4087	6	NIC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	102.565881266628	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACTGCTCAGTCTT	NA	False	NA	-48	True	AATAAA	-16	NA	75317294	75294185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317136
Isoform_188112_45	chr9	-	4205	6	NIC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-7	116	intron_retention	FALSE	canonical	3	45	junction_5	102.565881266628	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCCTGTTTGACTCTTT	NA	False	NA	-26	True	AATAAA	-16	NA	75317294	75294067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317136
Isoform_188113_288	chr9	-	4077	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACTGCTCAGTCTT	NA	False	NA	-48	True	AATAAA	-16	NA	75317292	75294185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
Isoform_188115_244	chr9	-	4197	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-7	-118	-7	116	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCCTGTTTGACTCTTT	NA	False	NA	-26	True	AATAAA	-16	NA	75317294	75294067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
Isoform_188126_319	chr9	-	3589	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	2	76	2	-76	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGATAGTCCCTTCATG	NA	False	NA	-5	True	NA	NA	NA	75466937	75405064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
Isoform_188131_37	chr9	-	3658	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	2	7	2	-7	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATTAGCTGTATGC	NA	False	NA	64	True	AATAAA	-23	NA	75466937	75404995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
Isoform_188140_7	chr9	-	1545	10	FSM	ENSMUSG00000032186.16	ENSMUST00000098552.10	9871	10	129	8197	-4	-2	multi-exon	FALSE	canonical	3	14	junction_9	3.42467444609388	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTGTAGTTTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	75518456	75481099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
Isoform_188141_3	chr9	-	2391	10	FSM	ENSMUSG00000032186.16	ENSMUST00000098552.10	9871	10	129	7351	-4	617	multi-exon	TRUE	canonical	3	14	junction_9	3.42467444609388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTTTCTGATACAT	NA	False	NA	NA	False	TTTAAA	-15	NA	75518456	75480253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
Isoform_188143_3	chr9	-	2040	12	FSM	ENSMUSG00000032181.8	ENSMUST00000213324.2	2152	12	103	9	63	-9	multi-exon	TRUE	canonical	0	0	junction_7	1.99171839092788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTGACGCTCTGAGAAA	7938	False	NA	-17	True	AATAAA	-16	NA	75591194	75550655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570489_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590219_75590273_75590916
Isoform_188145_9	chr9	-	6447	5	FSM	ENSMUSG00000032358.13	ENSMUST00000183437.8	3879	5	22	-2590	22	2590	multi-exon	FALSE	canonical	1	2	junction_4	1.87082869338697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTATATTGTTGAGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	76474376	76394745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_76400368_76409390_76409516_76410299_76410465_76452621_76453126_76474345
Isoform_188146_3	chr9	-	3475	6	NNC	ENSMUSG00000032358.13	novel	3879	5	NA	NA	16	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.78567765543682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATAGCTGTAGATGGG	NA	False	NA	NA	False	ATTAAA	-10	NA	76474382	76397835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_76400368_76409390_76409516_76410299_76410465_76452621_76453126_76465377_76465490_76474345
Isoform_188147_24	chr9	-	3104	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	17	0	-3	0	multi-exon	FALSE	canonical	3	32	junction_5	6.66972316521396	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAGCTTTTTAAGAATT	NA	False	NA	NA	False	AATAAA	-17	NA	77452135	77338104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
Isoform_188150_6	chr9	-	2904	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	-42	259	-42	7	multi-exon	FALSE	canonical	3	32	junction_5	6.66972316521396	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAAATGTTGCTATCTC	NA	False	NA	NA	False	AATAAA	-21	NA	77452194	77338363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
Isoform_188151_19	chr9	-	3141	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	-18	-2	-18	2	multi-exon	TRUE	canonical	3	32	junction_5	6.66972316521396	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGCTTTTTAAGAATTGT	NA	False	NA	NA	False	AATAAA	-19	NA	77452170	77338102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
Isoform_188153_76	chr9	-	2122	13	FSM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	31	2	-21	1	multi-exon	FALSE	non_canonical	2	34	junction_11	11.6437274482396	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTGTGGATGGCCTTT	NA	False	NA	1	True	AATAAA	-29	NA	78015907	77988782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
Isoform_188154_22	chr9	-	1851	13	FSM	ENSMUSG00000001366.15	ENSMUST00000001402.14	1850	13	0	-1	0	1	multi-exon	FALSE	non_canonical	2	18	junction_12	15.7920514464996	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTGTGGATGGCCTTT	NA	False	NA	1	True	AATAAA	-29	NA	78016347	77988782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78016283
Isoform_188157_5	chr9	-	1247	6	FSM	ENSMUSG00000001366.15	ENSMUST00000159099.8	1201	6	-45	-1	7	1	multi-exon	FALSE	non_canonical	2	34	junction_4	15.3961034031342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTCATATTGATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	78015931	78002793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
Isoform_188158_8	chr9	-	940	7	NIC	ENSMUSG00000057933.11	novel	870	7	NA	NA	-3874	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	12.0369800568452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	1	True	AATAAA	-17	NA	78249908	78238299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78249768
Isoform_188160_14	chr9	-	859	7	FSM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	11	0	11	0	multi-exon	FALSE	canonical	3	15	junction_6	11.4260910006684	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	1	True	AATAAA	-17	NA	78254429	78238299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78254370
Isoform_188164_74642	chr9	-	596	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	20	3	20	-3	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	74642	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCGTCGTCATTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	78275439	78274336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78274577_78275002_78275186_78275266
Isoform_188182_980	chr9	-	627	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	172	1339	172	-1339	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGGTTTGATCACAT	NA	False	NA	-9	True	TATAAA	-16	NA	78285835	78284729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78284974_78285256_78285440_78285635
Isoform_188183_27	chr9	-	1995	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	174	-31	174	31	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAAGGGTGGTTTTGCC	NA	False	NA	NA	False	GATAAA	-20	NA	78285833	78283359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78284974_78285256_78285440_78285635
Isoform_188184_197	chr9	-	819	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	22	1297	22	-1297	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTCAGTTGATGGTTC	NA	False	NA	-18	True	AGTAAA	-15	NA	78285985	78284687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78284974_78285256_78285440_78285635
Isoform_188188_25	chr9	-	847	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	-4	1295	-4	-1295	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCAGTTGATGGTTCGG	NA	False	NA	-16	True	AGTAAA	-17	NA	78286011	78284685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78284974_78285256_78285440_78285635
Isoform_188194_14	chr9	-	4088	5	FSM	ENSMUSG00000032344.18	ENSMUST00000070742.14	4049	5	-32	-7	1	7	multi-exon	FALSE	canonical	1	6	junction_4	3.56195171219375	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAATGTATCAGTCTTA	5241	False	NA	-1	True	AATAAA	-23	NA	78350518	78337800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78340550_78341594_78341698_78342722_78342966_78344584_78344805_78349745
Isoform_1882_8	chr10	-	2656	11	FSM	ENSMUSG00000039480.15	ENSMUST00000130290.2	1978	11	-22	-656	2	0	multi-exon	FALSE	canonical	2	9	junction_6	26.4469279879535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294546	34179604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
Isoform_188215_24334	chr9	-	1735	8	FSM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	53	6	53	-6	multi-exon	FALSE	canonical	3	9075	junction_7	2138.51814038008	24334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTTGGTCAATGCT	7153	False	NA	96	True	ATTAAA	-16	NA	78388953	78385736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
Isoform_18823_310	chr11	-	8381	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	439	1230	-13	29	multi-exon	TRUE	canonical	3	375	junction_39	98.8392726301593	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120714934	120697901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
Isoform_18824_27	chr11	-	8446	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	374	1230	-78	29	multi-exon	FALSE	canonical	3	375	junction_39	98.8392726301593	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120714999	120697901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
Isoform_188244_75	chr9	-	3222	11	FSM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	15	-1	1	1	multi-exon	FALSE	canonical	3	37	junction_3	5.61782876207526	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGTGTTTT	NA	False	NA	0	True	ATTAAA	-20	NA	78495308	78443768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792_78485990_78495155
Isoform_188250_1081	chr9	-	474	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	140	45	-28	0	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	1081	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79667020	79662687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
Isoform_188259_517	chr9	-	3554	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	99	5	99	-5	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAATCGTGCTGTTTAT	NA	False	NA	-14	True	AATAAA	-9	NA	79700613	79676229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
Isoform_18826_16	chr11	-	8550	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	269	1231	-183	28	multi-exon	FALSE	canonical	3	375	junction_39	98.8392726301593	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTTCGGTTCAGT	NA	False	NA	-12	True	ATTAAA	-14	NA	120715104	120697902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
Isoform_188264_43	chr9	-	4185	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	99	-626	99	626	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAATGAGAAGATGGT	NA	False	NA	NA	False	AATAAA	-12	NA	79700613	79675598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
Isoform_188269_16	chr9	-	3735	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	-82	5	-5	-5	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAATCGTGCTGTTTAT	NA	False	NA	-14	True	AATAAA	-9	NA	79700794	79676229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
Isoform_188271_11	chr9	-	3784	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	-135	9	-58	-9	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	-18	True	AATAAA	-5	NA	79700847	79676233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
Isoform_188274_11	chr9	-	10462	40	FSM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	31	263	31	-263	multi-exon	FALSE	canonical	3	34	junction_28	10.5485322148115	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTTTGTAGAGCCTCA	NA	False	NA	-5	True	AATAAA	-20	NA	82857538	82748474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
Isoform_188281_4	chr9	-	865	6	FSM	ENSMUSG00000066456.15	ENSMUST00000162246.9	983	6	119	-1	-36	1	multi-exon	FALSE	canonical	3	19	junction_1	12.1556571192182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCCACCTGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	83028619	82991999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_82992483_82993045_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
Isoform_188283_14	chr9	-	886	6	FSM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	-23	-1	-23	1	multi-exon	FALSE	canonical	3	36	junction_1	6.24179461373089	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCCACCTGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	83028681	82991999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
Isoform_188285_3	chr9	-	1437	5	FSM	ENSMUSG00000066456.15	ENSMUST00000185315.7	1391	5	-46	0	29	0	multi-exon	FALSE	canonical	3	40	junction_3	4.7169905660283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	83028629	82992000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
Isoform_188286_3	chr9	-	4158	9	NIC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	10.5948100502085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGATCCTTTATTTGAA	NA	False	NA	-6	True	AATAAA	-13	NA	83323142	83275472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83310932_83311002_83323093
Isoform_188287_3	chr9	-	4161	9	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.8274823943519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACACTGGGATCCTTTAT	NA	False	NA	-11	True	AATAAA	-8	NA	83323146	83275477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83310932_83311002_83323089
Isoform_188288_4	chr9	-	4235	8	FSM	ENSMUSG00000032258.16	ENSMUST00000034791.15	4160	8	-76	1	-10	-1	multi-exon	FALSE	canonical	3	4	junction_7	8.75051018920774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGATCCTTTATTTGAA	NA	False	NA	-6	True	AATAAA	-13	NA	83323156	83275472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83322961
Isoform_188289_11	chr9	-	4093	8	NIC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	6.67618368317024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	False	NA	-5	True	AATAAA	-14	NA	83323145	83275471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83323093
Isoform_188290_9	chr9	-	4098	8	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	9.37647947509825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTTTATTTGAATGACA	NA	False	NA	-1	True	AATAAA	-18	NA	83323142	83275467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83323089
Isoform_188293_83	chr9	-	3018	6	FSM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	-24	7	1	-7	multi-exon	FALSE	canonical	3	34	junction_4	3.49857113690718	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGACTCTGTCCGTCGT	NA	False	NA	-6	True	AATAAA	-19	NA	83688329	83660751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_83662863_83665188_83665317_83667087_83667260_83670321_83670403_83672029_83672218_83687991
Isoform_188307_58	chr9	-	5638	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	12	0	-8	0	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTAGCGTGTGTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	85631375	85569412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
Isoform_188308_58	chr9	-	5448	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	12	190	-8	7	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAATGTGTGTTTCAG	NA	False	NA	-18	True	ATTAAA	-10	NA	85631375	85569602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
Isoform_188309_79	chr9	-	5611	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	43	-4	23	4	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGCGTGTGTTTGATTT	NA	False	NA	-3	True	AATAAA	-20	NA	85631344	85569408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
Isoform_188313_44	chr9	-	5639	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_19	38.9746614442496	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGCGTGTGTTTGATTT	NA	False	NA	-3	True	AATAAA	-20	NA	85631375	85569408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604503_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
Isoform_18832_3	chr11	-	2668	15	ISM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	29142	2	-17819	-2	3prime_fragment	FALSE	canonical	2	6	junction_6	6.15281584781658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTCTGTCTTGTCCTA	1831	False	NA	0	True	ATTAAA	-26	NA	120794556	120717356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_120717751_120751226_120751453_120751963_120752096_120757380_120757503_120764411_120764626_120769703_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348
Isoform_188321_37	chr9	-	1785	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	2	3	2	-3	multi-exon	TRUE	canonical	3	19	junction_5	4.12160822022031	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTTCTTTTGTTCTT	NA	False	NA	-3	True	ATTAAA	-23	NA	86347001	86189361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
Isoform_188323_836	chr9	-	2025	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	6	635	6	-11	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCAGCCCCTTTC	NA	False	NA	-13	True	ATTAAA	-9	NA	86453874	86437064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
Isoform_188327_12	chr9	-	2640	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	5	21	5	-21	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAGAAACTATACA	NA	False	NA	NA	False	AATACA	-45	NA	86453875	86436450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
Isoform_188328_15	chr9	-	2240	14	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	-8	-11	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	173.196847341382	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCAGCCCCTTTC	NA	False	NA	-13	True	ATTAAA	-9	NA	86453854	86437064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86452640_86452876_86453782
Isoform_18833_12	chr11	-	3374	19	FSM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	26	3	26	-3	multi-exon	FALSE	canonical	2	6	junction_6	6.51399253648882	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTCTGTCTTGTCCT	1497	False	NA	-1	True	ATTAAA	-25	NA	120823672	120717357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120717751_120751226_120751453_120751963_120752096_120757380_120757503_120764411_120764626_120769703_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
Isoform_188338_337	chr9	-	3240	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	43	5	43	-5	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATACCGTAAATGTCAT	9653	False	NA	NA	False	ATTAAA	-15	NA	86577963	86463428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
Isoform_188339_40	chr9	-	2258	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	1	1029	1	286	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTAATGCCTACAGT	9611	False	NA	NA	False	AATAAA	-20	NA	86578005	86464452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
Isoform_188343_10	chr9	-	3379	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	-95	4	-95	-4	multi-exon	TRUE	canonical	3	250	junction_5	30.9913139195733	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATACCGTAAATGTCATT	9515	False	NA	NA	False	ATTAAA	-16	NA	86578101	86463427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
Isoform_188345_3	chr9	-	2200	8	NIC	ENSMUSG00000033419.17	novel	4318	28	NA	NA	-30	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	8.43220260764212	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGCAAACGTAATCTT	NA	False	NA	NA	False	AATAAA	-14	NA	86680782	86647986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_86649390_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86680590
Isoform_188346_3	chr9	-	3404	20	NIC	ENSMUSG00000033419.17	novel	2577	20	NA	NA	-55	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	6.74588209263668	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATGCAAACGTAATCT	NA	False	NA	NA	False	AATAAA	-13	NA	86762762	86647987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_86649390_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762524
Isoform_188348_4	chr9	-	7478	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	206	1	-42	-1	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGGAGTTTTGTGTTTA	NA	False	NA	NA	False	AATACA	-17	NA	87137383	87071630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
Isoform_188349_7	chr9	-	4622	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	239	2824	-9	-2824	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCAGACCGGAAATCAG	NA	False	NA	NA	False	ATTAAA	-14	NA	87137350	87074453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
Isoform_188350_32	chr9	-	4485	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	248	2952	0	-2952	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTTCCATGACGTCAGA	NA	False	NA	-5	True	ATTAAA	-15	NA	87137341	87074581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
Isoform_188355_19	chr9	-	3106	29	FSM	ENSMUSG00000032422.19	ENSMUST00000174806.9	3082	29	-12	-12	3	-3	multi-exon	FALSE	canonical	3	13	junction_14	53.7773542165344	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGGCCTTTTGTATTTAC	NA	False	NA	-7	True	AATAAA	-35	NA	88320979	88258807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
Isoform_188357_305	chr9	-	3082	28	FSM	ENSMUSG00000032422.19	ENSMUST00000165315.9	3109	28	25	2	3	0	multi-exon	TRUE	canonical	3	141	junction_13	28.9754164757839	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTTTTGTATTTACTGT	NA	False	NA	-4	True	AATAAA	-38	NA	88320979	88258804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
Isoform_18836_5	chr11	-	3409	14	ISM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	3	51250	3	-3987	5prime_fragment	FALSE	canonical	2	6	junction_1	7.23894791139606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTCCTTGGTACCCTT	1474	False	NA	NA	False	AGTAAA	-12	NA	120823695	120768604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
Isoform_188362_31	chr9	-	2173	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174282.8	3404	12	-25	1256	-25	-7	multi-exon	FALSE	canonical	3	172	junction_1	221.053263840518	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTGCTCTAAGTAGA	NA	False	NA	-8	True	AATAAA	-21	NA	88364274	88335997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188363_37	chr9	-	2139	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174282.8	3404	12	8	1257	8	-8	multi-exon	FALSE	canonical	3	172	junction_1	221.053263840518	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	False	NA	-9	True	AATAAA	-20	NA	88364241	88335998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188366_17	chr9	-	3604	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174282.8	3404	12	51	-251	4	-1	multi-exon	FALSE	canonical	3	172	junction_1	221.053263840518	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGTTACTGGTATAGC	NA	False	NA	-14	True	AATAAA	-18	NA	88364198	88334490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_18837_20	chr11	-	1406	7	ISM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	3	75154	3	-27891	5prime_fragment	FALSE	canonical	3	22	junction_2	1.37436854187255	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACTTGTGATAAGTGTA	1474	False	NA	NA	False	NA	NA	NA	120823695	120792508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
Isoform_188372_31	chr9	-	3400	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174282.8	3404	12	2	2	2	-2	multi-exon	FALSE	canonical	3	172	junction_1	221.053263840518	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAGGCGAGTGTAAC	NA	False	NA	-17	True	AATAAA	-16	NA	88364247	88334743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_18839_31	chr11	-	2344	9	FSM	ENSMUSG00000025162.19	ENSMUST00000239115.2	1823	9	6	-527	6	527	multi-exon	FALSE	canonical	3	23	junction_1	191.835052844885	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGGTTTCTAGGTCCT	782	False	NA	NA	False	ATTAAA	-17	NA	120882150	120849288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120850122_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
Isoform_188395_148	chr9	-	3397	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	371	5682	8	-2	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAGGCGAGTGTAAC	NA	False	NA	-17	True	AATAAA	-16	NA	88364241	88334743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188396_183	chr9	-	2143	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	371	6936	8	-7	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTGCTCTAAGTAGA	NA	False	NA	-8	True	AATAAA	-21	NA	88364241	88335997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188397_112	chr9	-	2176	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	338	6936	-25	-7	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTGCTCTAAGTAGA	NA	False	NA	-8	True	AATAAA	-21	NA	88364274	88335997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188398_40	chr9	-	2522	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	-9	6937	6	-8	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	False	NA	-9	True	AATAAA	-20	NA	88364621	88335998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188399_93	chr9	-	3650	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	371	5429	8	-1	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGTTACTGGTATAGC	NA	False	NA	-14	True	AATAAA	-18	NA	88364241	88334490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188402_36	chr9	-	4280	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	338	4832	-25	596	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGGCTTTTTTAATT	NA	False	NA	-3	True	ATTAAA	-23	NA	88364274	88333893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188403_94	chr9	-	3430	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	338	5682	-25	-2	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAGGCGAGTGTAAC	NA	False	NA	-17	True	AATAAA	-16	NA	88364274	88334743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188407_32	chr9	-	6400	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	327	2723	16	-1	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCAGGAGTCCAAGAAT	NA	False	NA	-17	True	AATAAA	-27	NA	88364285	88331784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188408_78	chr9	-	6347	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	371	2732	8	-10	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTAGGATCTCCAGGAG	NA	False	NA	-26	True	AATAAA	-18	NA	88364241	88331793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188410_46	chr9	-	3683	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	338	5429	-25	-1	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGTTACTGGTATAGC	NA	False	NA	-14	True	AATAAA	-18	NA	88364274	88334490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_188436_120	chr9	-	2572	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	367	5	8	-5	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGTGTTTACAATTC	NA	False	NA	NA	False	AATAAA	-29	NA	88364241	88337635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_18844_232	chr11	-	3732	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	-232	0	6	0	multi-exon	TRUE	canonical	3	176	junction_1	174.428237039028	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	782	False	NA	-11	True	AATAAA	-22	NA	120882150	120852574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
Isoform_188454_188	chr9	-	1000	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	674	4	0	1	multi-exon	FALSE	canonical	3	405	junction_2	300.420122495148	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536
Isoform_188457_131	chr9	-	736	6	FSM	ENSMUSG00000097195.11	ENSMUST00000182232.9	826	6	86	4	0	1	multi-exon	FALSE	canonical	3	405	junction_2	292.278634183205	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
Isoform_188458_22	chr9	-	778	6	FSM	ENSMUSG00000097195.11	ENSMUST00000239365.2	809	6	29	2	0	1	multi-exon	FALSE	canonical	3	34	junction_5	430.698688180032	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404682_88404903
Isoform_188459_15	chr9	-	1331	4	FSM	ENSMUSG00000097195.11	ENSMUST00000190033.4	1408	4	75	2	0	1	multi-exon	FALSE	canonical	3	405	junction_2	320.936476926856	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88403502_88403702_88403770_88403970_88404435_88404536
Isoform_188462_176	chr9	-	933	4	NIC	ENSMUSG00000097195.11	novel	1678	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	461	junction_1	319.66545011934	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536
Isoform_188464_618	chr9	-	669	5	NIC	ENSMUSG00000097195.11	novel	939	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	461	junction_1	309.579553588411	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404640_88404903
Isoform_188468_23	chr9	-	1264	3	NIC	ENSMUSG00000097195.11	novel	1534	3	NA	NA	0	1	intron_retention	FALSE	canonical	3	461	junction_1	364.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_88403502_88403970_88404435_88404536
Isoform_188474_4	chr9	-	3696	3	ISM	ENSMUSG00000079427.11	ENSMUST00000186863.7	725	4	39	-85	22	-1	intron_retention	FALSE	canonical	3	84	junction_2	221.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	88601601	88570659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_88571039_88597540_88597803_88598546
Isoform_188475_54	chr9	-	795	4	FSM	ENSMUSG00000079427.11	ENSMUST00000186863.7	725	4	17	-87	0	1	multi-exon	FALSE	canonical	3	43	junction_3	219.136182924378	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	88601623	88570657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88571039_88597540_88597803_88598546_88598617_88601541
Isoform_188476_4	chr9	-	855	4	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	226.851395313222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	88601853	88570657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_88571039_88597540_88597803_88598546_88598617_88601711
Isoform_188478_109	chr9	-	703	3	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	22	1	combination_of_known_splicesites	TRUE	canonical	3	156	junction_2	185.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	88601601	88570657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_88571039_88597540_88597803_88601541
Isoform_188479_145	chr9	-	778	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	20	3	20	1	multi-exon	FALSE	canonical	3	319	junction_2	104	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	88601846	88570657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_88571039_88597540_88597803_88601711
Isoform_188483_120	chr9	-	1287	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	61	-2	61	2	multi-exon	FALSE	canonical	3	96	junction_1	7.5	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAGTGATGTGTGCCT	NA	False	NA	-10	True	AATAAA	-16	NA	89587060	89581256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_89582033_89584824_89585074_89586798
Isoform_188500_297	chr9	-	1813	13	FSM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	64	5	8	1	multi-exon	FALSE	canonical	3	323	junction_10	2408.59367105002	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTGTGTGGCCGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	89996704	89973722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
Isoform_188506_4401	chr9	-	1696	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	123	5	8	1	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	4401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTGTGTGGCCGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	89996704	89973722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
Isoform_188507_750	chr9	-	1735	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	84	5	8	1	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTGTGTGGCCGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	89996743	89973722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
Isoform_188523_47	chr9	-	5934	13	FSM	ENSMUSG00000037410.14	ENSMUST00000041767.14	5956	13	-1	23	1	-23	multi-exon	FALSE	canonical	3	55	junction_2	8.96714682729251	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTAGGTGTAGTCATTT	NA	False	NA	-23	True	AATAAA	-26	NA	90152823	90084102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
Isoform_188524_4	chr9	-	2997	13	FSM	ENSMUSG00000037410.14	ENSMUST00000041767.14	5956	13	-23	2982	12	-2982	multi-exon	FALSE	canonical	3	55	junction_2	8.96714682729251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTCTTCTTGCCTTC	NA	False	NA	NA	False	NA	NA	NA	90152845	90087061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
Isoform_188525_6	chr9	-	5617	13	NIC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	0	-24	combination_of_known_splicesites	FALSE	canonical	2	4	junction_12	18.7387002988171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTAGGTGTAGTCATT	NA	False	NA	-24	True	AATAAA	-25	NA	90152824	90084103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152721
Isoform_188527_3	chr9	-	2285	4	ISM	ENSMUSG00000037410.14	ENSMUST00000144348.8	655	5	-2	-1458	-2	1458	intron_retention	FALSE	canonical	3	61	junction_1	8.60232526704263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTATTTTTAAATATAG	NA	False	NA	NA	False	NA	NA	NA	90152859	90109647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_90111155_90123062_90123232_90131843_90131998_90152404
Isoform_188530_268	chr9	-	3946	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	1	3	1	-3	multi-exon	FALSE	canonical	3	138	junction_2	1.5	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTGGCTACTCTGTCT	NA	False	NA	-4	True	AATAAA	-17	NA	94420133	94399919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_94402700_94406444_94406749_94419271
Isoform_188533_30	chr9	-	4198	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	-248	0	-248	0	multi-exon	FALSE	canonical	3	138	junction_2	1.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTACTCTGTCTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	94420382	94399916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_94402700_94406444_94406749_94419271
Isoform_188538_33	chr9	-	3067	3	NNC	ENSMUSG00000033350.8	novel	7328	2	NA	NA	-590	-4825	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGATAATAAATAATA	NA	False	NA	-35	True	NA	NA	NA	95289365	95286169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_95286494_95286519_95288527_95288629
Isoform_188544_246	chr9	-	3534	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	10	4086	1	-6	multi-exon	FALSE	canonical	0	0	junction_13	184.18480907976	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8303	False	NA	-7	True	AATAAA	-11	NA	95393937	95343036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_188545_124	chr9	-	4119	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	10	3501	1	579	multi-exon	FALSE	canonical	0	0	junction_13	184.18480907976	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8303	False	NA	-18	True	AATAAA	-16	NA	95393937	95342451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_188546_28	chr9	-	7621	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	10	-1	1	1	multi-exon	TRUE	canonical	0	0	junction_13	184.18480907976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGGTGTGCTCTGTGG	8303	False	NA	-2	True	ATTAAA	-18	NA	95393937	95338949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_188549_33	chr9	-	3402	27	FSM	ENSMUSG00000032407.15	ENSMUST00000078374.13	3520	27	112	6	1	-6	multi-exon	FALSE	canonical	0	0	junction_13	216.387107234962	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8303	False	NA	-7	True	AATAAA	-11	NA	95393937	95343036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
Isoform_188553_256	chr9	-	4107	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	1	-997	1	570	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAACGGTTTTCAGG	8303	False	NA	-27	True	AATAAA	-7	NA	95393937	95342460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_188554_439	chr9	-	3532	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	1	-422	1	-5	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATAATGTTGTTTTTT	8303	False	NA	-6	True	AATAAA	-12	NA	95393937	95343035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_188555_54	chr9	-	7618	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	1	-4508	1	1	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGGTGTGCTCTGTGG	8303	False	NA	-2	True	ATTAAA	-18	NA	95393937	95338949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_188562_74	chr9	-	3400	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	203.484137904403	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATAATGTTGTTTTTT	8303	False	NA	-6	True	AATAAA	-12	NA	95393937	95343035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
Isoform_188563_35	chr9	-	3984	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	579	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	203.484137904403	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8303	False	NA	-18	True	AATAAA	-16	NA	95393937	95342451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
Isoform_188588_3	chr9	-	4420	12	NIC	ENSMUSG00000032839.14	novel	2912	12	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	2.86904251601082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGATAGAGCTTGAG	NA	False	NA	NA	False	AATAAA	-17	NA	95632398	95587137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_95589021_95590253_95590449_95590698_95590901_95592168_95592345_95598135_95598280_95599572_95599713_95603185_95603523_95605147_95605344_95608477_95608589_95614059_95614263_95625249_95625405_95631720
Isoform_188589_3	chr9	-	4296	11	FSM	ENSMUSG00000032839.14	ENSMUST00000190604.7	2757	11	5	-1544	5	-1	multi-exon	TRUE	canonical	1	1	junction_5	2.90516780926679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGATAGAGCTTGAGCA	NA	False	NA	NA	False	AATAAA	-19	NA	95632406	95587135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_95589021_95590253_95590449_95590698_95590901_95592168_95592345_95598135_95598280_95599572_95599713_95603185_95603523_95605147_95605344_95608477_95608610_95614059_95614263_95631720
Isoform_18859_636	chr11	-	3669	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	6	0	6	0	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	782	False	NA	-11	True	AATAAA	-22	NA	120882150	120852574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
Isoform_188590_81	chr9	-	3695	16	FSM	ENSMUSG00000049493.14	ENSMUST00000093800.9	3704	16	6	3	6	-3	multi-exon	FALSE	canonical	3	26	junction_4	11.5231168623	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTGTTTATTTCATT	NA	False	NA	-1	True	AATAAA	-16	NA	95727333	95634697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_95636491_95636713_95636839_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95727223
Isoform_188595_832	chr9	-	1854	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	129	11	129	-11	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATTTAAAACTTGGAACA	NA	False	NA	-21	True	AATAAA	-30	NA	96246366	96214718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
Isoform_188596_44	chr9	-	1998	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	-15	11	-15	-11	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATTTAAAACTTGGAACA	NA	False	NA	-21	True	AATAAA	-30	NA	96246510	96214718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
Isoform_188598_194	chr9	-	1518	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	87	389	87	-389	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCTTCTGCGCATGT	NA	False	NA	-6	True	AATAAA	-16	NA	96246408	96215096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
Isoform_188605_499	chr9	-	1138	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	85	9	-2	-9	multi-exon	FALSE	canonical	3	1085	junction_1	10	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATATGCTCTTTA	3798	False	NA	-9	True	ATTAAA	-26	NA	96360643	96352998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96353906_96356010_96356059_96360460
Isoform_188606_103	chr9	-	1165	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	58	9	-7	-9	multi-exon	FALSE	canonical	3	1085	junction_1	10	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATATGCTCTTTA	3771	False	NA	-9	True	ATTAAA	-26	NA	96360670	96352998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96353906_96356010_96356059_96360460
Isoform_188608_27	chr9	-	1234	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	-11	9	-11	-9	multi-exon	FALSE	canonical	3	1085	junction_1	10	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATATGCTCTTTA	3702	False	NA	-9	True	ATTAAA	-26	NA	96360739	96352998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96353906_96356010_96356059_96360460
Isoform_188615_29	chr9	-	5731	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	82	0	1	0	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96513588	96421352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
Isoform_188616_7	chr9	-	5792	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	21	0	21	0	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96513649	96421352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
Isoform_188618_6	chr9	-	3073	3	FSM	ENSMUSG00000040433.17	ENSMUST00000126066.8	2937	3	1	-137	1	137	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAGA	9515	False	NA	NA	False	NA	NA	NA	96601902	96568173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96571083_96600262_96600363_96601838
Isoform_188620_3	chr9	-	3169	3	FSM	ENSMUSG00000040433.17	ENSMUST00000126066.8	2937	3	-100	-132	-100	132	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	9414	False	NA	NA	False	NA	NA	NA	96602003	96568178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96571083_96600262_96600363_96601838
Isoform_188623_50	chr9	-	2909	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	0	-1	0	1	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTACAGCTTACGGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	96771482	96705395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
Isoform_188626_3	chr9	-	3410	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	-501	-1	-456	1	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTACAGCTTACGGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	96771983	96705395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
Isoform_188629_42	chr9	-	2682	3	FSM	ENSMUSG00000046997.6	ENSMUST00000055433.5	2720	3	38	0	38	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTGTAAAGTGCTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	96900858	96825534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96826758_96877627_96878475_96900246
Isoform_188630_8	chr9	-	2744	3	FSM	ENSMUSG00000046997.6	ENSMUST00000055433.5	2720	3	-24	0	-24	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTGTAAAGTGCTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	96900920	96825534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96826758_96877627_96878475_96900246
Isoform_188642_18	chr9	-	4743	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-10	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_5	429.397961540341	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTATCTTAAGATT	NA	False	NA	-14	True	ATTAAA	-27	NA	96993180	96957627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_188648_433	chr9	-	4685	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-11	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993180	96957628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_188651_33	chr9	-	5299	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCTCTTGTTTCCACC	NA	False	NA	-1	True	NA	NA	NA	96993180	96957014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_188661_86	chr9	-	4623	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	33	-4	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	385.517410072992	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	-8	True	ATTAAA	-33	NA	96993177	96957621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_188665_28	chr9	-	4640	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-10	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	465.741015884956	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTATCTTAAGATT	NA	False	NA	-14	True	ATTAAA	-27	NA	96993180	96957627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_188667_23	chr9	-	4669	8	FSM	ENSMUSG00000032449.14	ENSMUST00000153070.8	1203	8	-120	-3346	30	-6	multi-exon	FALSE	canonical	3	41	junction_3	473.47189214679	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96993180	96957623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_188671_568	chr9	-	4582	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	30	615	30	-11	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993180	96957628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_188676_33	chr9	-	5197	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	30	0	30	0	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	False	NA	0	True	NA	NA	NA	96993180	96957013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_188686_443	chr9	-	1193	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	2	2	2	-2	multi-exon	FALSE	canonical	3	442	junction_2	42.1929484387994	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCTGTAATTCGTTT	NA	False	NA	-11	True	ATTAAA	-18	NA	98483711	98470784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
Isoform_188688_25	chr9	-	3612	7	NIC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	515	junction_4	22.0661883130428	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTCTGTAATTCGTT	NA	False	NA	-12	True	ATTAAA	-17	NA	98483720	98470785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_98470980_98472087_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
Isoform_188693_367	chr9	-	4858	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-127	1747	-127	0	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTGTCTTCTTTTT	NA	False	NA	-1	True	AATAAA	-25	NA	99022267	98920453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
Isoform_188697_21	chr9	-	4888	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-159	1749	-159	-2	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTGGGTGTCTTCTTT	NA	False	NA	-3	True	AATAAA	-23	NA	99022299	98920455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
Isoform_1887_503	chr10	-	2584	3	NNC	ENSMUSG00000069662.6	novel	4048	2	NA	NA	-5	-1446	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	169.5	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGTTGTGTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	37014921	37010816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_37011543_37011565_37012932_37014429
Isoform_188703_16	chr9	-	4580	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-74	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_20	50.0203470996248	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTGTCTTCTTTTTG	NA	False	NA	0	True	AATAAA	-26	NA	99022214	98920452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99022043
Isoform_188705_58	chr9	-	4520	23	FSM	ENSMUSG00000037681.14	ENSMUST00000042158.13	4483	23	-37	0	2	0	multi-exon	TRUE	canonical	3	14	junction_20	5.80538365130531	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATATTTCTATT	NA	False	NA	1	True	AATAAA	-20	NA	99240608	99192015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99193731_99193998_99194049_99197239_99197346_99198698_99198831_99199258_99199358_99199940_99200441_99201555_99201706_99202307_99202395_99202886_99202956_99203434_99203498_99203579_99203643_99204150_99204241_99204649_99204699_99206210_99206294_99206949_99207121_99209951_99210073_99211808_99211865_99212753_99212844_99213411_99213479_99214858_99214936_99218117_99218253_99220820_99220863_99240103
Isoform_18871_13	chr11	-	1011	4	FSM	ENSMUSG00000025163.7	ENSMUST00000026159.6	982	4	-32	3	-32	-3	multi-exon	FALSE	canonical	3	9	junction_2	2.49443825784929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCACTTGTTTTTGTTGC	7864	False	NA	NA	False	AATAAA	-19	NA	120930276	120927575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_120927977_120928505_120928643_120928861_120929177_120930118
Isoform_188714_29	chr9	-	1432	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-239	-1	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGGCTGTTGTCTTCTTA	2311	False	NA	20	True	GATAAA	-9	NA	99302444	99269981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
Isoform_188718_289	chr9	-	4017	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	682	2	227	-2	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGCCTTATTTCCTCT	3921	False	NA	-6	True	NA	NA	NA	99318752	99267474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
Isoform_188719_417	chr9	-	1507	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	686	2508	231	0	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCTGTTGTCTTCTTAA	3925	False	NA	21	True	GATAAA	-10	NA	99318748	99269980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
Isoform_18872_71	chr11	-	1680	3	FSM	ENSMUSG00000039337.4	ENSMUST00000039146.4	2046	3	363	3	363	-3	multi-exon	FALSE	canonical	3	61	junction_1	13.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTTTGCAGTCTCCT	NA	False	NA	-3	True	AATAAA	-16	NA	121009140	121007043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_121008523_121008652_121008727_121009013
Isoform_188721_57	chr9	-	1497	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	648	2556	193	3	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCGAAGCCCCAAGTCT	3887	False	NA	-27	True	ATTAAA	-18	NA	99318786	99270028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
Isoform_188722_41	chr9	-	4042	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	657	2	202	-2	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGCCTTATTTCCTCT	3896	False	NA	-6	True	NA	NA	NA	99318777	99267474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
Isoform_18873_17	chr11	-	1705	3	FSM	ENSMUSG00000039337.4	ENSMUST00000039146.4	2046	3	339	2	339	-2	multi-exon	FALSE	canonical	3	61	junction_1	13.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTTGCAGTCTCCTC	NA	False	NA	-2	True	AATAAA	-17	NA	121009164	121007042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_121008523_121008652_121008727_121009013
Isoform_188736_82	chr9	-	2685	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	240	1722	4	-1722	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACATAGATTTTCTTTA	NA	False	NA	0	True	AGTAAA	-26	NA	99450712	99362146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_18874_4	chr11	-	1807	2	NIC	ENSMUSG00000039337.4	novel	2046	3	NA	NA	368	-1	intron_retention	FALSE	canonical	3	88	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTTGCAGTCTCCTCA	NA	False	NA	-1	True	AATAAA	-18	NA	121009135	121007041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_121008727_121009013
Isoform_188740_15	chr9	-	4612	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	16	19	16	-19	multi-exon	TRUE	canonical	3	93	junction_7	54.8151294142266	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAACTTCTTTAAAGGAG	NA	False	NA	-13	True	AATAAA	-16	NA	99450936	99360443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_188744_47	chr9	-	4387	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	240	20	4	-20	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCAACTTCTTTAAAGGA	NA	False	NA	-14	True	AATAAA	-15	NA	99450712	99360444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_188754_36	chr9	-	3023	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-210	7	40	-7	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAGTTTTTATGTG	NA	False	NA	-8	True	AATAAA	-21	NA	99450912	99400863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_188755_63	chr9	-	2822	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-9	7	5	-7	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAGTTTTTATGTG	NA	False	NA	-8	True	AATAAA	-21	NA	99450711	99400863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_188756_65	chr9	-	1654	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-9	1175	5	-1175	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	NA	False	NA	-2	True	AATAAA	-17	NA	99450711	99402031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_188759_5	chr9	-	2974	11	FSM	ENSMUSG00000032468.12	ENSMUST00000186049.2	2761	11	-216	3	16	-3	multi-exon	FALSE	canonical	3	18	junction_10	66.7805360864975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTTTTTATGTGTGTG	NA	False	NA	-4	True	AATAAA	-25	NA	99450936	99400859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
Isoform_18876_192	chr11	-	1298	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	4	6	4	-6	multi-exon	FALSE	canonical	3	143	junction_7	19.9483708607996	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAGTGTGTGATCTGGG	NA	False	NA	-13	True	AGTAAA	-35	NA	121095533	121068422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
Isoform_188761_8	chr9	-	2747	11	FSM	ENSMUSG00000032468.12	ENSMUST00000186049.2	2761	11	5	9	1	-9	multi-exon	FALSE	canonical	3	18	junction_10	66.7805360864975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACTATAGTTTTTATG	NA	False	NA	-10	True	AATAAA	-19	NA	99450715	99400865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
Isoform_188764_7	chr9	-	2737	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	26	1713	14	997	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTATAACACCTGCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	100428161	100376058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
Isoform_188767_3	chr9	-	1503	3	NIC	ENSMUSG00000032475.16	novel	4476	4	NA	NA	0	-19	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	61.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAGAAAATAAGAAATTAT	NA	False	NA	-59	True	ACTAAA	-12	NA	100428187	100377074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_100377725_100379310_100380024_100428047
Isoform_188769_3	chr9	-	1570	2	FSM	ENSMUSG00000070287.4	ENSMUST00000093792.4	1590	2	14	6	14	-4	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTCATGATCTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	100453129	100434246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_100435688_100453000
Isoform_188770_3	chr9	-	1008	3	ISM	ENSMUSG00000032527.14	ENSMUST00000149322.8	2188	14	49612	5	344	-5	3prime_fragment	FALSE	canonical	3	102	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACTTGGGTGTTGTTTT	NA	False	NA	-5	True	NA	NA	NA	100867318	100864089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_100864860_100866425_100866526_100867180
Isoform_188771_99	chr9	-	2293	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	22	5	1	-5	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACTTGGGTGTTGTTTT	NA	False	NA	-5	True	NA	NA	NA	100916929	100864089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
Isoform_188775_5	chr9	-	2185	14	FSM	ENSMUSG00000032527.14	ENSMUST00000149322.8	2188	14	1	2	1	-2	multi-exon	FALSE	canonical	0	0	junction_9	26.8991102116318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGGGTGTTGTTTTTTT	NA	False	NA	-2	True	NA	NA	NA	100916929	100864086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
Isoform_188778_6	chr9	-	4045	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-60	2801	-60	-2	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGAAATGTGGAAAGCT	NA	False	NA	NA	False	AATAAA	-19	NA	101129054	100985083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
Isoform_188779_26	chr9	-	6616	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-33	203	-33	-1	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATCATATCTGTTACTG	NA	False	NA	NA	False	AATAAA	-20	NA	101129027	100982485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
Isoform_188783_4	chr9	-	2580	15	NIC	ENSMUSG00000032534.19	novel	2696	17	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	44.6453142180974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503745	102463884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_102464212_102465906_102466187_102467526_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
Isoform_188785_142	chr9	-	2094	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	-12	2098	-12	1	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503745	102463884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
Isoform_188786_20	chr9	-	2196	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	-12	1996	-12	-6	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGAGTAACTACAGAGC	NA	False	NA	93	True	AATAAA	-21	NA	102503745	102463782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
Isoform_188788_5	chr9	-	1971	12	NIC	ENSMUSG00000032534.19	novel	4180	13	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	34.0354700737407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503745	102463884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102492473_102492570_102496009_102496188_102496890_102496960_102503461
Isoform_18879_142	chr11	-	2379	7	FSM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	36	2	32	-2	multi-exon	FALSE	canonical	0	0	junction_6	26.4790273403101	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCCTTTCTGTTTTCT	NA	False	NA	-2	True	AATAAA	-20	NA	121120099	121113415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119864
Isoform_188792_22	chr9	-	981	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	9	2074	1	295	multi-exon	FALSE	canonical	3	242	junction_6	16.5873110807294	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCTTGAGTTCTTGAA	NA	False	NA	NA	False	GATAAA	-20	NA	103079327	103067304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
Isoform_188793_95	chr9	-	2315	17	FSM	ENSMUSG00000032554.16	ENSMUST00000035158.16	2571	17	175	81	1	-81	multi-exon	FALSE	canonical	3	17	junction_12	9.88982273602515	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCCCAAACTCCATTCT	NA	False	NA	-8	True	AATAAA	-18	NA	103107468	103086074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103086278_103087693_103087878_103089010_103089196_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107372
Isoform_188797_139	chr9	-	3203	5	FSM	ENSMUSG00000032803.16	ENSMUST00000035484.11	3387	5	174	10	-47	0	multi-exon	FALSE	canonical	3	85	junction_1	174.534201519358	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242865	103230302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103242252
Isoform_1888_86	chr10	-	4031	3	NNC	ENSMUSG00000069662.6	novel	4048	2	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCGTGTTATTAAGTCT	NA	False	NA	-1	True	AATAAA	-18	NA	37014921	37009368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_37011542_37011565_37012932_37014429
Isoform_18880_56	chr11	-	2361	7	NIC	ENSMUSG00000039294.15	novel	2417	7	NA	NA	29	-3	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	17.7709188157381	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGCCTTTCTGTTTTC	NA	False	NA	-3	True	AATAAA	-19	NA	121120102	121113416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119884
Isoform_188804_107	chr9	-	3916	5	FSM	ENSMUSG00000032803.16	ENSMUST00000189896.2	1023	5	-47	-2846	-47	0	multi-exon	FALSE	canonical	3	61	junction_1	184.859913177519	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242865	103230302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103233226_103233478_103233639_103237074_103237218_103241173_103241251_103242252
Isoform_188811_26	chr9	-	3913	5	FSM	ENSMUSG00000032803.16	ENSMUST00000189875.8	554	5	-539	-2820	-47	0	multi-exon	TRUE	canonical	3	42	junction_2	179.509052696514	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242865	103230302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103233229_103233478_103233633_103237074_103237218_103241173_103241251_103242252
Isoform_188816_713	chr9	-	3920	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-128	-5	-47	1	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGAATGTGATGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	103242865	103230301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
Isoform_18882_19	chr11	-	2233	7	FSM	ENSMUSG00000039294.15	ENSMUST00000106115.8	2239	7	3	3	3	-3	multi-exon	FALSE	canonical	2	10	junction_6	22.8284666346404	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGCCTTTCTGTTTTC	NA	False	NA	-3	True	AATAAA	-19	NA	121120128	121113416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121120038
Isoform_188836_18	chr9	-	800	2	ISM	ENSMUSG00000032803.16	ENSMUST00000189896.2	1023	5	-163	8031	58	-2377	5prime_fragment	FALSE	canonical	3	478	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTAGGATGTGATTA	NA	False	NA	NA	False	NA	NA	NA	103242981	103241179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_103241251_103242252
Isoform_188839_15	chr9	-	2151	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189066.2	2145	6	-6	0	-6	0	multi-exon	FALSE	canonical	3	18	junction_4	9.53729521405309	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGCACTGATTGCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	103638999	103361634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486992_103630053_103630167_103638953
Isoform_188840_6	chr9	-	2246	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189066.2	2145	6	-103	2	-60	1	multi-exon	FALSE	canonical	3	18	junction_4	9.53729521405309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGTTGCACTGATTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	103639096	103361636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486992_103630053_103630167_103638953
Isoform_188841_3	chr9	-	3665	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189066.2	2145	6	-32	-1488	3	-1	multi-exon	FALSE	canonical	3	18	junction_4	9.53729521405309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAAGTCGCTAATACAT	NA	False	NA	NA	False	AATAAA	-19	NA	103639025	103360146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486992_103630053_103630167_103638953
Isoform_188842_4	chr9	-	2244	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189588.7	2850	6	-55	661	-55	0	multi-exon	FALSE	canonical	1	4	junction_4	14.324803663576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGGTTGCACTGATTGC	NA	False	NA	NA	False	AATAAA	-14	NA	103639091	103361637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486996_103630053_103630167_103638953
Isoform_188843_10	chr9	-	2183	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189588.7	2850	6	9	658	1	0	multi-exon	FALSE	canonical	1	4	junction_4	14.324803663576	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGCACTGATTGCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	103639027	103361634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486996_103630053_103630167_103638953
Isoform_188844_3	chr9	-	3694	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189588.7	2850	6	-14	-830	-14	-1	multi-exon	FALSE	canonical	1	4	junction_4	14.324803663576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAAGTCGCTAATACAT	NA	False	NA	NA	False	AATAAA	-19	NA	103639050	103360146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486996_103630053_103630167_103638953
Isoform_188845_3	chr9	-	2281	7	NNC	ENSMUSG00000042757.17	novel	2850	6	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	18.6785676348292	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGTTGCACTGATTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	103639035	103361636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_103361983_103366387_103366543_103376000_103377408_103384221_103384314_103486909_103486996_103630053_103630167_103638953
Isoform_188847_45	chr9	-	2391	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	10	3	10	-3	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCTGCTTTGAGATTC	NA	False	NA	-16	True	AATAAA	-15	NA	103940323	103923800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
Isoform_188848_287	chr9	-	1488	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	19	897	19	154	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGAGTTGTTATGCTGTGT	NA	False	NA	-17	True	AATAAA	-35	NA	103940314	103924694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
Isoform_18886_1019	chr11	-	2258	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	53	10	1	-10	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	1019	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTAAAGAGCAGAGCC	NA	False	NA	-9	True	AATAAA	-23	NA	121245218	121218059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
Isoform_188880_137	chr9	-	7688	56	FSM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	7	317	7	-317	multi-exon	FALSE	canonical	3	149	junction_37	31.3582656798217	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTATGTTCTGTAATT	NA	False	NA	-1	True	AATAAA	-25	NA	104140122	104028797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
Isoform_188881_61	chr9	-	7707	56	FSM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	-15	320	-15	-320	multi-exon	FALSE	canonical	3	149	junction_37	31.3582656798217	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	NA	False	NA	-4	True	AATAAA	-22	NA	104140144	104028800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
Isoform_188882_5	chr9	-	7633	55	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-6	-316	combination_of_known_splicesites	FALSE	canonical	1	2	junction_51	42.2093385151617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTATGTTCTGTAATTT	NA	False	NA	0	True	AATAAA	-26	NA	104140108	104028796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114775_104114926_104115663_104115740_104123958_104124040_104139897
Isoform_188887_15	chr9	-	1597	3	FSM	ENSMUSG00000032565.10	ENSMUST00000035179.9	1631	3	27	7	-17	-7	multi-exon	FALSE	canonical	3	25	junction_1	2	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCAGCTGTCTGGC	NA	False	NA	NA	False	AGTAAA	-11	NA	105008996	105006537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_105007710_105008491_105008762_105008841
Isoform_188896_29	chr9	-	4731	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-14	925	-3	0	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105372307	105288561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
Isoform_1889_33	chr10	-	2607	3	NNC	ENSMUSG00000069662.6	novel	4048	2	NA	NA	-29	-1446	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGTTGTGTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	37014945	37010816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_37011542_37011565_37012932_37014429
Isoform_188900_10	chr9	-	4808	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-90	924	-51	1	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372383	105288560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
Isoform_188902_15	chr9	-	3775	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-85	1952	-46	533	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTTGTTTTTTGGTTTT	NA	False	NA	-13	True	AGTAAA	-25	NA	105372378	105289588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
Isoform_188907_121	chr9	-	3892	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-49	1033	-49	532	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTGTTTTTTGGTTT	NA	False	NA	-14	True	AGTAAA	-24	NA	105372381	105289589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
Isoform_188910_226	chr9	-	3817	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	26	1033	-2	532	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTGTTTTTTGGTTT	NA	False	NA	-14	True	AGTAAA	-24	NA	105372306	105289589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
Isoform_188912_134	chr9	-	4850	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	22	4	-6	1	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372310	105288560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
Isoform_188917_69	chr9	-	4922	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-51	5	-51	0	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105372383	105288561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
Isoform_18892_59	chr11	-	2820	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	25	19	25	-19	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATATTAAGGCACAAT	NA	False	NA	-17	True	AATAAA	-7	NA	121563954	121507041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
Isoform_188929_11	chr9	-	1289	3	ISM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	17	57908	-11	-159	5prime_fragment	FALSE	canonical	3	385	junction_2	26	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCACCTC	NA	False	NA	NA	False	NA	NA	NA	105372315	105346464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_105347347_105371613_105371797_105372091
Isoform_18893_67	chr11	-	2277	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	15	572	15	-572	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTTCTAACAATGTAAA	NA	False	NA	-9	True	AATAAA	-18	NA	121563964	121507594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
Isoform_188933_33	chr9	-	4029	5	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-1992	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	3.53553390593274	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACATGTGTCTTACTAAT	3463	False	NA	-3	True	AATAAA	-21	NA	106037329	106030055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687_106035104_106037295
Isoform_188936_3	chr9	-	2310	7	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-4178	668	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.72677996249965	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATCTCCCCTCAGCACC	1277	False	NA	NA	False	AATAAA	-26	NA	106039515	106032078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_106033307_106033607_106033784_106034343_106034495_106034687_106035104_106037295_106037434_106038130_106038227_106039410
Isoform_188939_288	chr9	-	1822	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	23	1	23	-1	multi-exon	FALSE	canonical	3	106	junction_7	13.9682178931713	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTCTCTCTCTTTT	3866	False	NA	-5	True	NA	NA	NA	106076451	106072150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
Isoform_18894_3	chr11	-	2932	13	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	73	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	25.9422435421457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATATTAAGGCACAAT	NA	False	NA	-17	True	AATAAA	-7	NA	121563906	121507041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563650
Isoform_188941_10	chr9	-	2241	9	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	111	junction_3	11.9556472012183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	3850	False	NA	-4	True	NA	NA	NA	106076467	106072149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106075196_106075299_106075424_106076168
Isoform_188942_8	chr9	-	2560	8	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	23	-3	intron_retention	FALSE	canonical	3	111	junction_3	12.0203908388358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	3866	False	NA	-7	True	NA	NA	NA	106076451	106072152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106075196_106075299_106075424_106076168
Isoform_188943_16	chr9	-	2178	11	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	-38	-3	combination_of_known_junctions	TRUE	canonical	1	1	junction_9	54.0582093673107	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATAGTCCTGGTTAGT	8524	False	NA	-17	True	AATAAA	-28	NA	106125107	106111128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120592_106123957_106124178_106124983
Isoform_188944_499	chr9	-	2181	11	FSM	ENSMUSG00000032786.17	ENSMUST00000141118.9	3399	11	746	472	-38	-3	multi-exon	FALSE	canonical	3	139	junction_7	18.0612845611822	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATAGTCCTGGTTAGT	8524	False	NA	-17	True	AATAAA	-28	NA	106125107	106111128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
Isoform_188948_190	chr9	-	1418	15	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_14	59.3909565025326	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315420	106310188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
Isoform_18895_5	chr11	-	2777	12	NIC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	15	-7	combination_of_known_splicesites	FALSE	canonical	2	12	junction_9	22.2443232613485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACAATCTTGACTATAAC	NA	False	NA	-5	True	AATAAA	-19	NA	121563964	121507029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121561695_121561796_121561882_121562000_121563810
Isoform_188950_11	chr9	-	1557	15	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_14	59.3909565025326	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315560	106310189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
Isoform_188951_150	chr9	-	1431	15	FSM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	88	10	-29	0	multi-exon	FALSE	canonical	3	198	junction_14	78.143510052117	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315430	106310189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
Isoform_188953_12	chr9	-	1589	15	FSM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	-70	10	-70	0	multi-exon	FALSE	canonical	3	198	junction_14	78.143510052117	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315588	106310189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
Isoform_188956_7	chr9	-	1255	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.893067242576	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTGACGTTGTGTTTCC	NA	False	NA	-3	True	AATAAA	-24	NA	106324875	106317253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322851_106322969_106323034_106324729
Isoform_188958_104	chr9	-	1231	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	28	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.56165113888	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	False	NA	-1	True	AATAAA	-26	NA	106324849	106317251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323029_106324729
Isoform_188960_102	chr9	-	1236	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	28	1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	104.893067242576	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	False	NA	-1	True	AATAAA	-26	NA	106324849	106317251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
Isoform_188962_3	chr9	-	1057	5	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	116.405272646904	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	False	NA	1	True	AATAAA	-28	NA	106324863	106317249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106324729
Isoform_188963_11	chr9	-	1302	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.893067242576	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTGACGTTGTGTTTCC	NA	False	NA	-3	True	AATAAA	-24	NA	106324863	106317253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106317604_106317819_106318110_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
Isoform_188965_5	chr9	-	1075	3	ISM	ENSMUSG00000023192.13	ENSMUST00000201681.2	2111	7	8594	-349	615	349	3prime_fragment	FALSE	canonical	2	2	junction_2	2	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACGTTTTGTTAAAAAAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	106524687	106521734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_106522291_106522495_106522677_106524349
Isoform_188966_4	chr9	-	4898	5	ISM	ENSMUSG00000023192.13	ENSMUST00000023959.13	4711	6	-5	1419	-3	349	intron_retention	FALSE	canonical	0	0	junction_4	2.27760839478607	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACGTTTTGTTAAAAAAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	106533284	106521734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_106522291_106522495_106522677_106524349_106525426_106527594_106528433_106531037
Isoform_188967_82	chr9	-	1991	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	-98	3	-2	-3	multi-exon	FALSE	canonical	3	46	junction_5	161.744242555956	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGAGTTGGTTTTTGT	7874	False	NA	-3	True	AATAAA	-25	NA	106563120	106535947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
Isoform_188971_133	chr9	-	1584	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	-222	2	-1	-2	multi-exon	FALSE	canonical	3	151	junction_5	120.179865202121	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGAGTTGGTTTTTGTC	7891	False	NA	-2	True	AATAAA	-26	NA	106563103	106535946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
Isoform_188972_33	chr9	-	1615	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	-253	2	-8	-2	multi-exon	FALSE	canonical	3	151	junction_5	120.179865202121	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGAGTTGGTTTTTGTC	7860	False	NA	-2	True	AATAAA	-26	NA	106563134	106535946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
Isoform_188975_326	chr9	-	1387	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	10	-6	-2	0	multi-exon	TRUE	canonical	3	285	junction_5	67.9187750183997	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	7890	False	NA	0	True	AATAAA	-28	NA	106563104	106535944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
Isoform_188976_42	chr9	-	1466	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	-73	-2	-61	2	multi-exon	FALSE	canonical	3	285	junction_5	67.9187750183997	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGAGTTGGTTTTTG	7807	False	NA	-4	True	AATAAA	-24	NA	106563187	106535948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
Isoform_188978_9	chr9	-	1363	6	NIC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	172.206387802543	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	7890	False	NA	-6	True	AATAAA	-22	NA	106563104	106535950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562145_106562195_106563033
Isoform_18898_21	chr11	-	3591	10	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_7	46.9704398768228	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397049	59376347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394590_59394973_59395081_59396653_59396789_59396989
Isoform_188983_10	chr9	-	6377	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	-1	2929	-1	-2221	multi-exon	TRUE	canonical	3	17	junction_10	7.57277616039918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTGTGTCCTGCGTC	7294	False	NA	-2	True	CATAAA	-17	NA	106666394	106568209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
Isoform_188985_8	chr9	-	622	5	NIC	ENSMUSG00000032575.17	novel	357	3	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	394.142344210819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGGGAAAATGATCAATT	NA	False	NA	NA	False	AATAAA	-40	NA	106769130	106746396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106746561_106747401_106747472_106767359_106767502_106768269_106768398_106769012
Isoform_188987_589	chr9	-	866	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	41	1340	-21	-2	multi-exon	FALSE	canonical	3	771	junction_3	24.1660919471891	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCACAGTATTCTGT	NA	False	NA	-13	True	ATTAAA	-22	NA	106769137	106765953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
Isoform_188989_3	chr9	-	1236	11	NIC	ENSMUSG00000039716.13	novel	9063	53	NA	NA	15	-348	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	3.3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAAGAAAAGGATTT	NA	False	NA	NA	False	NA	NA	NA	107109093	106900964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_106901075_106902519_106902581_106909474_106909557_106932648_106932804_106933321_106933364_106939197_106939283_106985558_106985656_107011985_107012042_107036613_107036655_107056279_107056364_107108670
Isoform_18899_8	chr11	-	3667	10	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	32.4200821774878	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGTTTTCTTCTATCC	NA	False	NA	-5	True	AATAAA	-21	NA	59397080	59376349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
Isoform_188994_320	chr9	-	2682	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.0594746552762	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTCCTGGGTTTCTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	107166984	107132128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
Isoform_188995_114	chr9	-	2752	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.0594746552762	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGGTTTCTTTATGTC	NA	False	NA	-1	True	AATAAA	-25	NA	107167050	107132124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
Isoform_188996_104	chr9	-	2676	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	68.4651084449602	104	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGGTTTCTTTATGTC	NA	False	NA	-1	True	AATAAA	-25	NA	107166978	107132124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
Isoform_188997_19	chr9	-	2823	11	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_10	45.4053961550827	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGATTCCTGGGTTTC	NA	False	NA	-9	True	AATAAA	-17	NA	107167094	107132132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
Isoform_188998_27	chr9	-	2670	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.5227239836863	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGATTCCTGGGTTTC	NA	False	NA	-9	True	AATAAA	-17	NA	107166978	107132132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139155_107139621_107139687_107140823_107140964_107166318_107166596_107166723
Isoform_188999_16	chr9	-	2735	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.5227239836863	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTCCTGGGTTTCTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	107167039	107132128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139155_107139621_107139687_107140823_107140964_107166318_107166596_107166723
Isoform_1890_15	chr10	-	2428	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	-5	1625	-5	-1625	multi-exon	FALSE	canonical	3	339	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTTTGTGTAGCATCT	NA	False	NA	-2	True	AATAAA	-23	NA	37014921	37010995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_37012932_37014429
Isoform_18900_203	chr11	-	3632	10	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	32.4200821774878	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397043	59376347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
Isoform_189001_18	chr9	-	2736	11	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	71.6913523376425	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGATTCCTGGGTTTC	NA	False	NA	-9	True	AATAAA	-17	NA	107167009	107132132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139155_107139621_107139687_107140823_107140964_107166318_107166596_107166727
Isoform_189006_3	chr9	-	2410	10	ISM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	62	622	13	4	intron_retention	FALSE	canonical	3	133	junction_9	21.7346511756779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGAGCCAGTATTTT	NA	False	NA	-26	True	AGTAAA	-17	NA	107215487	107204904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199
Isoform_189008_11	chr9	-	2187	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	5	0	-5	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATGGACTGCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	107215549	107204287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
Isoform_189009_139	chr9	-	1579	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	7	606	7	2	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTATTAACATTCATG	NA	False	NA	-10	True	AATAAA	-14	NA	107215542	107204888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
Isoform_189010_5	chr9	-	1187	10	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	55.2618905142583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAAATGGTGAGCCAGT	NA	False	NA	-31	True	AGTAAA	-12	NA	107215549	107204909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107215479
Isoform_189011_5	chr9	-	1316	10	NNC	ENSMUSG00000032579.15	novel	1888	10	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	57.3643327047972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGGTGAGCCAGTATT	NA	False	NA	-28	True	AGTAAA	-15	NA	107215544	107204906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213994_107215479
Isoform_189012_3	chr9	-	1201	3	FSM	ENSMUSG00000037190.13	ENSMUST00000041459.9	1786	3	12	573	12	1	multi-exon	FALSE	canonical	3	104	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCTGTCGGGAGGAGC	NA	False	NA	-25	True	AATAAA	-14	NA	107419052	107416778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107417585_107418201_107418240_107418695
Isoform_189013_22	chr9	-	1153	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	25	-16	25	16	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGAGTTGAGGATGGTT	NA	False	NA	-4	True	AATAAA	-35	NA	107419367	107416757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
Isoform_189014_84	chr9	-	1098	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	61	3	-5	-3	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGTCGGGAGGAGCAG	NA	False	NA	-23	True	AATAAA	-16	NA	107419331	107416776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
Isoform_189016_22	chr9	-	2748	17	ISM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	247	-4	114	2	3prime_fragment	FALSE	canonical	3	40	junction_12	7.52054477747457	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGGCCCCAGCAGAC	8405	False	NA	-20	True	AATAAA	-18	NA	107482354	107475549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
Isoform_189017_6	chr9	-	2883	17	ISM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	247	-139	114	1	3prime_fragment	TRUE	canonical	3	40	junction_12	7.52054477747457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGCTGGTTCCAGTGAGC	8405	False	NA	-1	True	ATTAAA	-16	NA	107482354	107475414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
Isoform_189019_6	chr9	-	2925	17	ISM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	205	-139	72	1	3prime_fragment	FALSE	canonical	3	40	junction_12	7.52054477747457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGCTGGTTCCAGTGAGC	8363	False	NA	-1	True	ATTAAA	-16	NA	107482396	107475414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
Isoform_189021_4	chr9	-	3156	19	ISM	ENSMUSG00000057969.16	ENSMUST00000102530.8	3410	21	2518	-137	0	1	3prime_fragment	FALSE	canonical	0	0	junction_18	15.5384826944089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGCTGGTTCCAGTGAGC	6879	False	NA	-1	True	ATTAAA	-16	NA	107483880	107475414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483748
Isoform_189022_4	chr9	-	3196	19	ISM	ENSMUSG00000057969.16	ENSMUST00000102530.8	3410	21	2478	-137	-38	1	3prime_fragment	FALSE	canonical	0	0	junction_18	15.5384826944089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGCTGGTTCCAGTGAGC	6839	False	NA	-1	True	ATTAAA	-16	NA	107483920	107475414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483748
Isoform_189023_3	chr9	-	3397	21	FSM	ENSMUSG00000057969.16	ENSMUST00000102530.8	3410	21	13	0	7	0	multi-exon	FALSE	canonical	0	0	junction_18	19.0711824489202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATGGCCCCAGCAG	4374	False	NA	-22	True	AATAAA	-16	NA	107486385	107475551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483748_107484134_107484232_107484292_107486319
Isoform_189024_3	chr9	-	3046	19	NNC	ENSMUSG00000057969.16	novel	3410	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	17.4203655473262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTGGAATGGCCCCAG	6880	False	NA	-25	True	AATAAA	-13	NA	107483879	107475554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482614_107482787_107483748
Isoform_189028_146	chr9	-	1789	9	FSM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	-29	17	2	-17	multi-exon	FALSE	canonical	3	246	junction_1	364.681860496241	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	4796	False	NA	-17	True	AATAAA	-7	NA	107512540	107491340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
Isoform_18904_28	chr11	-	3873	3	Intergenic	novelGene_2375	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	175	junction_1	12.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTGTCTTGCTTGGTT	NA	False	NA	-2	True	NA	NA	NA	121816149	121795184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121798837_121799014_121799142_121816055
Isoform_189041_1665	chr9	-	2178	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	23	14	-1	-14	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	1665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACACCAAAAACTTCCG	4793	False	NA	-14	True	AATAAA	-10	NA	107512543	107491337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
Isoform_189043_116	chr9	-	2219	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	-21	17	-21	-17	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	4749	False	NA	-17	True	AATAAA	-7	NA	107512587	107491340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
Isoform_18905_17	chr11	-	2688	3	Intergenic	novelGene_2373	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	94	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGTCTTGCTTGGTTC	NA	False	NA	-1	True	NA	NA	NA	121816143	121795183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121797657_121799014_121799142_121816055
Isoform_189050_5	chr9	-	2445	16	FSM	ENSMUSG00000010064.16	ENSMUST00000193932.6	2463	16	24	-6	24	0	multi-exon	FALSE	canonical	0	0	junction_10	1.9731531449265	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTGTGTTCTATATTCT	9803	False	NA	NA	False	TATAAA	-15	NA	107544601	107528353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107529238_107529327_107529432_107532221_107532367_107532454_107532580_107532783_107532885_107533133_107533214_107533298_107533470_107533654_107533714_107533793_107533877_107534828_107534911_107535008_107535102_107535192_107535267_107535835_107535952_107536130_107536210_107536293_107536444_107544502
Isoform_189052_3	chr9	-	3110	19	NIC	ENSMUSG00000034684.13	novel	2383	18	NA	NA	-2	88	combination_of_known_junctions	TRUE	canonical	1	3	junction_14	4.82438507563655	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTACCCCTGCAAAGACAG	9832	False	NA	NA	False	NA	NA	NA	107587220	107559528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
Isoform_189053_5	chr9	-	2989	18	NIC	ENSMUSG00000034684.13	novel	3395	18	NA	NA	24	86	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	3.78121380705605	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTACCCCTGCAAAGAC	9858	False	NA	NA	False	NA	NA	NA	107587194	107559530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
Isoform_189055_20	chr9	-	3076	25	FSM	ENSMUSG00000032580.13	ENSMUST00000035199.13	3064	25	-12	0	-3	0	multi-exon	FALSE	canonical	3	44	junction_9	145.554250815823	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9702	False	NA	-6	True	AAGAAA	-12	NA	107648198	107617698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626996_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
Isoform_18906_133	chr11	-	2748	4	Intergenic	novelGene_2374	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTGTCTTGCTTGGTT	NA	False	NA	-2	True	NA	NA	NA	121816143	121795184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
Isoform_189062_8	chr9	-	3503	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_24	147.218227802206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9719	False	NA	-1	True	AAGAAA	-17	NA	107648181	107617693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647647
Isoform_189063_22	chr9	-	3389	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_24	145.293470976274	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	9729	False	NA	-2	True	AAGAAA	-16	NA	107648171	107617694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647750
Isoform_189065_478	chr9	-	3084	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	-3	124	-3	0	multi-exon	FALSE	canonical	3	262	junction_19	112.690456068333	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9702	False	NA	-1	True	AAGAAA	-17	NA	107648198	107617693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
Isoform_18907_61	chr11	-	2773	4	Intergenic	novelGene_2376	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTGTCTTGCTTGGTT	NA	False	NA	-2	True	NA	NA	NA	121816168	121795184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
Isoform_189070_11	chr9	-	3009	24	FSM	ENSMUSG00000032580.13	ENSMUST00000182371.8	2986	24	-19	-4	-3	0	multi-exon	FALSE	canonical	3	16	junction_19	139.730783549852	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	9702	False	NA	-2	True	AAGAAA	-16	NA	107648198	107617694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
Isoform_189078_3	chr9	+	1391	8	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATCTCCTTCTGAGTA	NA	False	NA	NA	False	TTTAAA	-11	NA	107628778	107634734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_107628991_107629074_107629153_107629309_107629398_107630175_107630273_107631219_107631382_107631621_107631688_107633051_107633113_107634107
Isoform_18908_7	chr11	-	3289	4	Intergenic	novelGene_2371	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTACTCTGCTTTGT	NA	False	NA	NA	False	AATAGA	-17	NA	121816178	121794678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
Isoform_189084_18	chr9	-	3714	22	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	111.389126107381	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7620	False	NA	NA	False	AATAAA	-16	NA	107749913	107650763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107738821_107738929_107749847
Isoform_189085_12	chr9	-	3774	22	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	111.389126107381	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7561	False	NA	NA	False	AATAAA	-17	NA	107749972	107650762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107738821_107738929_107749847
Isoform_189087_117	chr9	-	3618	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	97	1	-2	-1	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7610	False	NA	NA	False	AATAAA	-17	NA	107749923	107650762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
Isoform_189088_33	chr9	-	3732	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	-18	2	-10	-2	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7495	False	NA	NA	False	AATAAA	-16	NA	107750038	107650763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
Isoform_189089_106	chr9	-	3666	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	48	2	-2	-2	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7561	False	NA	NA	False	AATAAA	-16	NA	107749972	107650763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
Isoform_189090_35	chr9	-	4045	22	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	113.526006690147	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7561	False	NA	NA	False	AATAAA	-17	NA	107749972	107650762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107738821_107738929_107749847
Isoform_189091_80	chr9	-	3952	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	41	6	-13	-2	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7546	False	NA	NA	False	AATAAA	-16	NA	107749987	107650763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
Isoform_189092_81	chr9	-	3876	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	117	6	10	-2	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7622	False	NA	NA	False	AATAAA	-16	NA	107749911	107650763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
Isoform_189093_29	chr9	-	3983	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	11	5	3	-1	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7516	False	NA	NA	False	AATAAA	-17	NA	107750017	107650762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
Isoform_189097_58	chr9	-	2169	17	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	3	80	junction_15	79.7133291473264	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7546	False	NA	NA	False	AATAAA	-17	NA	107749987	107650762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
Isoform_189099_16	chr9	-	2220	17	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	3	80	junction_15	79.7133291473264	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7495	False	NA	NA	False	AATAAA	-17	NA	107750038	107650762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
Isoform_189109_14	chr9	-	1063	2	FSM	ENSMUSG00000042106.6	ENSMUST00000048568.6	1025	2	-40	2	-40	-2	multi-exon	FALSE	canonical	3	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGGTCCCATACTCC	9716	False	NA	NA	False	AATAAA	-15	NA	107863118	107861423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107862264_107862895
Isoform_18911_25	chr11	-	2991	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-54	83	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	70.8071629214704	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGACTGAGTAGCTGT	NA	False	NA	-6	True	AATAAA	-24	NA	52174212	52143114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_52144813_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_189112_7	chr9	-	4705	39	FSM	ENSMUSG00000041528.16	ENSMUST00000162355.8	4727	39	18	4	-17	1	multi-exon	FALSE	canonical	3	15	junction_38	17.254651305945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGGGCCCGCTCT	NA	False	NA	-6	True	ATTAAA	-12	NA	107956482	107928874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
Isoform_189113_38	chr9	-	4252	39	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_17	14.9572798866187	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107956494	107928870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
Isoform_189116_13	chr9	-	4681	39	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_38	16.5285784572411	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGGGCCCGCTCT	NA	False	NA	-6	True	ATTAAA	-12	NA	107956476	107928874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
Isoform_189117_34	chr9	-	4240	39	FSM	ENSMUSG00000041528.16	ENSMUST00000178267.8	4309	39	70	-1	0	1	multi-exon	FALSE	canonical	3	35	junction_17	14.098780914274	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGGGCCCGCTCT	NA	False	NA	-6	True	ATTAAA	-12	NA	107956504	107928874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
Isoform_189118_33	chr9	-	4268	39	FSM	ENSMUSG00000041528.16	ENSMUST00000178267.8	4309	39	42	-1	-28	1	multi-exon	FALSE	canonical	3	35	junction_17	14.098780914274	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGGGCCCGCTCT	NA	False	NA	-6	True	ATTAAA	-12	NA	107956532	107928874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
Isoform_189119_4	chr9	-	3776	35	NIC	ENSMUSG00000041528.16	novel	3789	35	NA	NA	-1	-8	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	15.5326701127156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAGAGTAACTGGTGAT	NA	False	NA	NA	False	AATGAA	-27	NA	107956501	107933105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
Isoform_189123_17	chr9	-	2461	21	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	131	1	1	0	intron_retention	FALSE	canonical	3	143	junction_17	21.0653744329409	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	-33	True	AATAAA	-13	NA	107971674	107962612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425
Isoform_189126_512	chr9	-	2382	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	134	2	4	-1	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTCTGTGCTGGTAC	NA	False	NA	-34	True	AATAAA	-12	NA	107971671	107962613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
Isoform_189128_10	chr9	-	2496	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	19	3	19	-2	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGGTCTGTGCTGGTA	NA	False	NA	-35	True	AATAAA	-11	NA	107971786	107962614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
Isoform_189129_17	chr9	-	2265	21	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_19	42.4109360896456	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	-33	True	AATAAA	-13	NA	107971680	107962612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107971425_107971559_107971633
Isoform_189131_6	chr9	-	2475	21	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	-9	0	intron_retention	FALSE	canonical	3	126	junction_20	23.4803641368698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	-33	True	AATAAA	-13	NA	107971687	107962612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
Isoform_189133_23	chr9	-	1724	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5518	2541	5518	-2541	3prime_fragment	FALSE	canonical	3	14	junction_1	4.12310562561766	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAAACATGCAGTTGAGA	3821	False	NA	NA	False	AATAAA	-26	NA	107982094	107975762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
Isoform_189134_13	chr9	-	1253	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5480	3050	5480	-3050	3prime_fragment	FALSE	canonical	3	14	junction_1	4.12310562561766	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGTTGTTTTAT	3783	False	NA	NA	False	NA	NA	NA	107982132	107976271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
Isoform_189135_3	chr9	-	1824	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5410	2549	5410	-2549	intron_retention	FALSE	canonical	3	14	junction_1	4.12310562561766	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTAATTGCAAACATGC	3713	False	NA	NA	False	AATAAA	-18	NA	107982202	107975770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
Isoform_189136_9	chr9	-	4265	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5519	-1	5519	0	3prime_fragment	TRUE	canonical	3	14	junction_1	4.12310562561766	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCTCGGGGTGATTTC	3822	False	NA	0	True	AATAAA	-25	NA	107982093	107973220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
Isoform_18914_12	chr11	-	3091	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	10	81	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	90.6081382147531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTCTGACTGAGTAGCT	NA	False	NA	-8	True	AATAAA	-22	NA	52174148	52143116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_189145_31	chr9	-	5483	4	NIC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	-2	-233	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	175.562587763516	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108141119	108082065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108086861_108095211_108095610_108130207_108130357_108140978
Isoform_18915_9	chr11	-	3137	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-35	82	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	90.6081382147531	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	NA	False	NA	-7	True	AATAAA	-23	NA	52174193	52143115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_189150_64	chr9	-	5534	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	-29	-1090	-14	-234	multi-exon	FALSE	canonical	3	68	junction_3	198.863995959271	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108140964	108082066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
Isoform_189152_58	chr9	-	5557	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	-51	-1091	28	-233	multi-exon	FALSE	canonical	3	68	junction_3	198.863995959271	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108140986	108082065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
Isoform_189156_215	chr9	-	5413	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	28	-1077	28	-233	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108140986	108082065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
Isoform_189159_32	chr9	-	5542	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	-101	-1077	2	-233	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108141115	108082065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
Isoform_189161_29	chr9	-	5589	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	-148	-1077	-5	-233	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108141162	108082065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
Isoform_189168_304	chr9	-	5391	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	38	233	-2	-233	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108141119	108082065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
Isoform_18917_60	chr11	-	3054	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-44	83	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	63.363712012476	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGACTGAGTAGCTGT	NA	False	NA	-6	True	AATAAA	-24	NA	52174202	52143114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_189181_19	chr9	-	5329	3	FSM	ENSMUSG00000039952.16	ENSMUST00000166905.8	4244	3	2	-1087	2	-234	multi-exon	FALSE	canonical	3	32	junction_2	218.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108141115	108082066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108086861_108095211_108095610_108140978
Isoform_189184_3	chr9	-	2709	2	ISM	ENSMUSG00000039461.13	ENSMUST00000044725.9	1668	3	-170	-578	0	578	intron_retention	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	7115	False	NA	NA	False	NA	NA	NA	108183359	108179578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_108181453_108182524
Isoform_189185_28	chr9	-	1599	3	FSM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	191	-696	-21	0	multi-exon	TRUE	canonical	3	19	junction_2	5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTGTGGTTATTCAA	7306	False	NA	-2	True	ATTAAA	-13	NA	108183168	108180156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108181453_108182524_108182580_108182920
Isoform_189186_3	chr9	-	2520	7	NNC	ENSMUSG00000032609.13	novel	2718	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.64578662158878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGTGGGGTTTCTT	9987	False	NA	-8	True	AATAAA	-12	NA	108329965	108324836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108326985_108327477_108327692_108328074_108328591_108329515
Isoform_189187_14	chr9	-	2329	6	FSM	ENSMUSG00000032609.13	ENSMUST00000035232.13	1897	6	-413	-19	11	-3	multi-exon	TRUE	canonical	3	5	junction_5	2.71293199325011	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGTGGGGTTTCT	9963	False	NA	-9	True	AATAAA	-11	NA	108329989	108324837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108326985_108328074_108328591_108329515
Isoform_189189_5	chr9	-	3415	5	NIC	ENSMUSG00000032609.13	novel	2718	11	NA	NA	16	-2	intron_retention	FALSE	canonical	3	5	junction_4	3.03108891324554	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGTGGGGTTTCTT	9968	False	NA	-8	True	AATAAA	-12	NA	108329984	108324836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108328591_108329515
Isoform_18919_14	chr11	-	2180	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-198	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9868405862266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTAGTGTGGCTCCTCTT	NA	False	NA	-9	True	AGTAAA	-14	NA	120675231	120671576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_189190_318	chr9	-	670	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	491	326	-13	-2	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTGCTCAGTTTG	8634	False	NA	-4	True	NA	NA	NA	108444142	108443061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
Isoform_189191_26	chr9	-	937	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	498	52	-6	-52	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCAGTTGTCACTTTTT	8641	False	NA	NA	False	NA	NA	NA	108444135	108442787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
Isoform_189192_7	chr9	-	1004	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	491	-8	-13	8	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGTTTTCAGAAAAGCC	8634	False	NA	NA	False	NA	NA	NA	108444142	108442727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
Isoform_189193_9	chr9	-	1138	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	24	325	24	-1	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTGCTCAGTTTGG	8167	False	NA	-3	True	NA	NA	NA	108444609	108443060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
Isoform_189196_8	chr9	-	595	4	NIC	ENSMUSG00000070283.5	novel	1487	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	232.267566014332	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCTCAGTTTGGC	8644	False	NA	-2	True	NA	NA	NA	108444132	108443059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108443275_108443357_108443459_108443754_108443951_108444049
Isoform_18920_37	chr11	-	2003	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9868405862266	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675049	120671571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_189212_273	chr9	-	4106	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	57	0	57	0	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5808	False	NA	-1	True	AATAAA	-20	NA	108455881	108449509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
Isoform_189213_340	chr9	-	4049	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	114	0	114	0	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5865	False	NA	-1	True	AATAAA	-20	NA	108455824	108449509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
Isoform_189214_38	chr9	-	4140	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	23	0	23	0	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5774	False	NA	-1	True	AATAAA	-20	NA	108455915	108449509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
Isoform_189218_6	chr9	-	2069	9	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-6	-16	intron_retention	FALSE	canonical	2	11	junction_5	19.5923294939627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCGGCGAGCTAAGCGC	NA	False	NA	-14	True	AATAAA	-20	NA	108474785	108456076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097
Isoform_18922_3	chr11	-	2291	8	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_1	60.8460754524002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675049	120671572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673454_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_189220_29	chr9	-	1808	9	FSM	ENSMUSG00000006675.11	ENSMUST00000006853.11	1841	9	75	-42	-12	42	multi-exon	FALSE	canonical	2	23	junction_3	12.7273082385868	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATGTGTGTGTGTGT	NA	False	NA	44	True	NA	NA	NA	108474791	108456018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_189221_48	chr9	-	1745	9	FSM	ENSMUSG00000006675.11	ENSMUST00000006853.11	1841	9	80	16	-7	-16	multi-exon	FALSE	canonical	2	23	junction_3	12.7273082385868	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCGGCGAGCTAAGCGC	NA	False	NA	-14	True	AATAAA	-20	NA	108474786	108456076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_189222_8	chr9	-	2695	8	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	11	junction_4	19.905901083829	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCGCCCGCTTGGGGGAG	NA	False	NA	-1	True	AATAAA	-33	NA	108474786	108456063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097
Isoform_189223_20	chr9	-	2514	9	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-7	43	intron_retention	FALSE	canonical	3	11	junction_4	18.9369843164111	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATGTGTGTGTGTGTG	NA	False	NA	45	True	NA	NA	NA	108474786	108456017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_189224_3	chr9	-	2415	8	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-13	36	intron_retention	FALSE	canonical	3	31	junction_7	10.0772526220277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTAGTCTCATGTGTGT	NA	False	NA	38	True	NA	NA	NA	108474792	108456024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_189225_3	chr9	-	2278	3	ISM	ENSMUSG00000006675.11	ENSMUST00000195181.2	2035	4	-12	-4	-8	4	intron_retention	FALSE	canonical	3	44	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAATCA	NA	False	NA	NA	False	NA	NA	NA	108474787	108458745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_108460143_108460840_108461032_108474097
Isoform_189226_4	chr9	-	2044	4	FSM	ENSMUSG00000006675.11	ENSMUST00000195181.2	2035	4	-5	-4	-1	4	multi-exon	FALSE	canonical	3	31	junction_3	6.94422221866655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAATCA	NA	False	NA	NA	False	NA	NA	NA	108474780	108458745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_18923_9	chr11	-	1913	8	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.2738781864983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675049	120671572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_18924_3	chr11	-	2078	8	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-181	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.2738781864983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675214	120671572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_189242_76	chr9	-	3968	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	243.725439467754	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCTGTGGAGTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	108526584	108480144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
Isoform_189246_107	chr9	-	2223	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	16	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	-8	True	AATAAA	-27	NA	108526560	108481868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
Isoform_189247_59	chr9	-	3972	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526584	108480143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
Isoform_189249_99	chr9	-	3948	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526560	108480143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
Isoform_18926_6	chr11	-	2538	7	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-181	1	intron_retention	TRUE	canonical	0	0	junction_1	65.2090654910973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	NA	False	NA	-3	True	AGTAAA	-20	NA	120675214	120671570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_189262_201	chr9	-	3898	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	359	junction_14	154.606683771002	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCTGTGGAGTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	108526560	108480144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
Isoform_189264_162	chr9	-	2204	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-9	12	combination_of_known_junctions	FALSE	canonical	3	359	junction_14	154.606683771002	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCTATTTGACTTAGAA	NA	False	NA	-12	True	AATAAA	-23	NA	108526594	108481872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
Isoform_189265_262	chr9	-	2174	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	16	combination_of_known_junctions	FALSE	canonical	3	359	junction_14	154.606683771002	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	-8	True	AATAAA	-27	NA	108526560	108481868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
Isoform_18927_27	chr11	-	2371	7	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_1	65.2090654910973	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675049	120671572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_189271_735	chr9	-	3903	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	19	2	8	-2	multi-exon	TRUE	canonical	3	517	junction_5	114.47891605978	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTGGAGTCTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	108526560	108480142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
Isoform_189272_831	chr9	-	2177	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	19	1728	8	16	multi-exon	FALSE	canonical	3	517	junction_5	114.47891605978	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	-8	True	AATAAA	-27	NA	108526560	108481868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
Isoform_18929_48	chr11	-	816	2	Intergenic	novelGene_1902	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGCCATGGTGGCATT	4759	False	NA	-25	True	AATAAA	-17	NA	83458250	83454495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_83455094_83458032
Isoform_189295_42	chr9	-	4103	14	NIC	ENSMUSG00000025646.10	novel	4215	14	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	34.9887555902104	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTGCCGCCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	108903173	108887004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108887997_108888256_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_189296_6	chr9	-	1081	2	FSM	ENSMUSG00000049734.10	ENSMUST00000061973.5	1084	2	0	3	0	2	multi-exon	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTTGCCGCCTCTGC	NA	False	NA	-2	True	AATAAA	-15	NA	108888802	108887003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108887997_108888714
Isoform_189297_34	chr9	-	2548	13	NIC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	38.7092976198513	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903173	108888816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890267_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_189298_384	chr9	-	2569	13	FSM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	2	1	-2	-1	multi-exon	FALSE	canonical	3	123	junction_2	14.834971819619	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTCCTGAGTCCG	NA	False	NA	0	True	ATTAAA	-25	NA	108903190	108888815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_189302_11	chr9	-	2485	13	FSM	ENSMUSG00000025646.10	ENSMUST00000160217.8	4248	13	-52	1815	1	-1	multi-exon	FALSE	canonical	3	16	junction_5	38.4544282957835	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTCCTGAGTCCG	NA	False	NA	0	True	ATTAAA	-25	NA	108903191	108888815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894280_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_189304_35	chr9	-	2730	8	ISM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	2	4499	-2	3219	5prime_fragment	FALSE	canonical	3	126	junction_6	12.2407816210354	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGTATAAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	108903190	108893313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_189310_1420	chr9	-	488	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	209	247	0	52	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTCTAGTGTTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	108911446	108907201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
Isoform_189311_650	chr9	-	636	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	209	99	0	-99	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTGTGTGCTTGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	108911446	108907053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
Isoform_18932_67	chr11	-	2865	2	Intergenic	novelGene_1853	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATTTATTTATTTATT	NA	False	NA	-5	True	ATTAAA	-18	NA	79867139	79863321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79865963_79866915
Isoform_18933_5	chr11	-	3383	2	Intergenic	novelGene_1849	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	79867140	79862804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79865963_79866915
Isoform_189339_932	chr9	-	3753	19	FSM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	53	0	4	0	multi-exon	FALSE	canonical	3	264	junction_18	79.7176537599273	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109930102	109913387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
Isoform_189343_22	chr9	-	4053	24	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	182.775513865531	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946483	109913389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
Isoform_189346_217	chr9	-	3961	23	FSM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	7	0	4	0	multi-exon	FALSE	canonical	3	120	junction_20	140.114150629448	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946483	109913387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
Isoform_189350_44	chr9	-	3954	23	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_21	160.130247864018	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946482	109913387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944224_109944558_109944651_109946425
Isoform_189355_316	chr9	-	4023	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	415	3	4	0	multi-exon	FALSE	canonical	3	162	junction_20	135.338876788039	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946483	109913390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
Isoform_189359_59	chr9	-	4020	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_21	156.078578694428	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946483	109913387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944224_109944558_109944651_109946425
Isoform_189361_22	chr9	-	3900	22	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_20	148.196137730021	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946483	109913387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944558_109944651_109946425
Isoform_189364_10	chr9	-	1464	2	FSM	ENSMUSG00000032480.18	ENSMUST00000196788.2	1424	2	-41	1	4	-1	multi-exon	FALSE	canonical	3	279	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	109946483	109943244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_109944651_109946425
Isoform_189373_89	chr9	-	5317	25	FSM	ENSMUSG00000036057.12	ENSMUST00000040021.12	5346	25	24	5	24	-5	multi-exon	FALSE	canonical	3	45	junction_24	14.8742413438654	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGAGTTCACCTACT	NA	False	NA	-8	True	AATAAA	-16	NA	110237257	110214154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
Isoform_189376_17	chr9	-	4449	10	FSM	ENSMUSG00000054792.16	ENSMUST00000068025.13	4530	10	78	3	-26	-1	multi-exon	FALSE	canonical	1	6	junction_9	1.68508343201146	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCAGTTTCCTGA	2036	False	NA	-5	True	AATAAA	-14	NA	110305684	110254996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265302_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
Isoform_189377_5	chr9	-	4464	10	FSM	ENSMUSG00000054792.16	ENSMUST00000198164.5	4538	10	73	1	-26	-1	multi-exon	FALSE	canonical	1	3	junction_4	2.46956786343254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCAGTTTCCTGA	2036	False	NA	-5	True	AATAAA	-14	NA	110305684	110254996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265317_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
Isoform_189378_3	chr9	-	4547	10	FSM	ENSMUSG00000054792.16	ENSMUST00000198164.5	4538	10	-12	3	-7	-3	multi-exon	FALSE	canonical	1	3	junction_4	2.46956786343254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTCTTGCAGTTTCCT	1951	False	NA	-7	True	AATAAA	-12	NA	110305769	110254998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265317_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
Isoform_18938_38	chr11	-	6662	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	20	527	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	94.3880126858041	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTCCAATGGAAGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	68899257	68875995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
Isoform_189381_9	chr9	-	1030	5	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	22	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	51.265851207212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTACTTGGCTCCTTGG	8967	False	NA	-8	True	ATTAAA	-22	NA	110453477	110450205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_110450806_110450907_110451051_110451139_110451183_110452154_110452304_110453382
Isoform_189382_272	chr9	-	1194	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	28	1	7	-1	multi-exon	FALSE	canonical	3	119	junction_3	3.96074487943871	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACTTGGCTCCTTGGAC	8952	False	NA	-6	True	ATTAAA	-24	NA	110453492	110450203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
Isoform_189383_6	chr9	-	1257	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	-36	2	-36	-2	multi-exon	FALSE	canonical	3	119	junction_3	3.96074487943871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACTTGGCTCCTTGGA	8888	False	NA	-7	True	ATTAAA	-23	NA	110453556	110450204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
Isoform_189385_14	chr9	-	1278	5	NNC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	51.6786948364604	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACTTGGCTCCTTGGAC	8967	False	NA	-6	True	ATTAAA	-24	NA	110453477	110450203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452403_110453382
Isoform_189386_26	chr9	-	1996	4	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	-21	1	intron_retention	TRUE	canonical	3	126	junction_2	1.88561808316413	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGCTCCTTGGACCT	8977	False	NA	-4	True	ATTAAA	-26	NA	110453467	110450201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_110450806_110450907_110451051_110451139_110452304_110453382
Isoform_189387_4	chr9	-	2107	3	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	7	-2	intron_retention	FALSE	canonical	3	126	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACTTGGCTCCTTGGA	8952	False	NA	-7	True	ATTAAA	-23	NA	110453492	110450204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_110450806_110450907_110452304_110453382
Isoform_189388_3	chr9	-	1352	4	ISM	ENSMUSG00000049555.11	ENSMUST00000050958.9	2802	6	6146	335	2054	-335	3prime_fragment	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110703035	110695113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_110696026_110696515_110696666_110699698_110699817_110702863
Isoform_1894_39	chr10	-	4162	3	NNC	ENSMUSG00000069662.6	novel	4048	2	NA	NA	-5	133	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	169.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGCCTACTAAAGTAGG	NA	False	NA	NA	False	AATAAA	-19	NA	37014921	37009237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_37011542_37011565_37012932_37014429
Isoform_189406_6719	chr9	-	1863	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	64	5	0	-5	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	6719	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTGAGTAGTGCCTT	NA	False	NA	-20	True	AGTAAA	-16	NA	110775162	110768675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
Isoform_18941_39	chr11	-	3221	4	Intergenic	novelGene_2379	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	17.326921891156	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	121847568	121832047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121834966_121836089_121836151_121836329_121836457_121847453
Isoform_18943_36	chr11	-	2456	5	NNC	ENSMUSG00000075611.6	novel	375	3	NA	NA	-3180	1842	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.58113883008419	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGTGTTTCTCTG	2163	False	NA	NA	False	AATAAA	-22	NA	94651769	94645959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94647982_94648187_94648387_94648522_94648622_94649100_94649124_94651656
Isoform_189432_50	chr9	-	2505	19	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	1	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	111.636756635522	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	-13	True	AATAAA	-29	NA	111100601	111057308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
Isoform_189433_15	chr9	-	2563	19	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	9	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	111.636756635522	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	-13	True	AATAAA	-29	NA	111100659	111057308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
Isoform_189434_349	chr9	-	2509	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	259	-14	2	-13	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	-13	True	AATAAA	-29	NA	111100600	111057308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
Isoform_189436_7	chr9	-	4836	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	213	-2295	22	2268	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTTTGGATTTCTGG	NA	False	NA	-6	True	ATTAAA	-8	NA	111100646	111055027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
Isoform_189439_8	chr9	-	4558	16	NIC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	2	1	intron_retention	FALSE	canonical	3	71	junction_15	81.6292431260595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTTTTTTTTTATAT	NA	False	NA	-26	True	AATAAA	-16	NA	111100600	111057321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
Isoform_18944_8	chr11	-	2693	5	NNC	ENSMUSG00000075611.6	novel	375	3	NA	NA	-3417	1842	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.58113883008419	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGTGTTTCTCTG	1926	False	NA	NA	False	AATAAA	-22	NA	94652006	94645959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94647982_94648187_94648387_94648522_94648622_94649100_94649124_94651656
Isoform_189446_586	chr9	-	3198	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	24	2729	9	-1	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTTATGTTTTGTC	NA	False	NA	-9	True	AATAAA	-16	NA	113537303	113483540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
Isoform_189449_139	chr9	-	5926	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	24	1	9	-1	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTGGAGTATGAATT	NA	False	NA	-10	True	AATAAA	-16	NA	113537303	113480812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
Isoform_189457_109	chr9	-	3210	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	77.3019514339821	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTTATGTTTTGTC	NA	False	NA	-9	True	AATAAA	-16	NA	113537306	113483540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
Isoform_189461_20	chr9	-	5924	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	77.3019514339821	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTGGAGTATGAATTC	NA	False	NA	-9	True	AATAAA	-17	NA	113537291	113480811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
Isoform_189463_19	chr9	-	2100	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	37	1327	2	3	multi-exon	FALSE	canonical	3	21	junction_13	8.10139821643304	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTAGAATGGATGTGG	NA	False	NA	-9	True	AGTAAA	-14	NA	113855792	113807101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
Isoform_189464_14	chr9	-	2134	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	11	1319	11	11	multi-exon	FALSE	canonical	3	21	junction_13	8.10139821643304	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGATGTGGTTTTTATT	NA	False	NA	-1	True	AGTAAA	-22	NA	113855818	113807093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
Isoform_189465_11	chr9	-	2202	15	NIC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-4	14	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	11.0628999408853	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTGGTTTTTATTTAC	NA	False	NA	2	True	AGTAAA	-25	NA	113875263	113807090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113875140
Isoform_189467_1079	chr9	-	1659	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	13	2	13	-2	multi-exon	FALSE	canonical	3	526	junction_5	47.5280618862864	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTCTCCGTCCTTCC	NA	False	NA	NA	False	GATAAA	-18	NA	114219730	114204203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
Isoform_189469_265	chr9	-	1709	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	-37	2	-37	-2	multi-exon	FALSE	canonical	3	526	junction_5	47.5280618862864	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTCTCCGTCCTTCC	NA	False	NA	NA	False	GATAAA	-18	NA	114219780	114204203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
Isoform_18947_5	chr11	-	2736	3	Intergenic	novelGene_1851	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	36.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	79867140	79862806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79863780_79864424_79865963_79866915
Isoform_189479_6	chr9	-	9249	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	79	4	79	-4	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGGTGTCCGTGTGA	NA	False	NA	-7	True	AATAAA	-18	NA	114393358	114336204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
Isoform_18948_10	chr11	-	2678	3	Intergenic	novelGene_1852	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTATTTATTT	NA	False	NA	-4	True	ATTAAA	-19	NA	79867139	79863320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79863780_79864424_79866420_79866915
Isoform_189483_146	chr9	-	2741	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	-109	221	1	-133	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469251	114415166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_189486_67	chr9	-	2735	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	1	-136	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_5	132.25432982036	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGGTTTGT	NA	False	NA	-13	True	TATAAA	-17	NA	114469251	114415169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_189490_536	chr9	-	2704	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	1	-134	combination_of_known_splicesites	FALSE	canonical	3	267	junction_4	76.1876338755546	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTGTGT	NA	False	NA	-11	True	TATAAA	-19	NA	114469251	114415167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_189495_161	chr9	-	2703	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-133	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_7	96.2047231971076	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469252	114415166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_18950_21	chr11	-	3322	2	Intergenic	novelGene_1854	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATTTATTTATTTATT	NA	False	NA	-5	True	ATTAAA	-18	NA	79867139	79863321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79866420_79866915
Isoform_189500_50	chr9	-	3811	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-10	-136	intron_retention	FALSE	canonical	3	299	junction_6	61.6594621559125	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGGTTTGT	NA	False	NA	-13	True	TATAAA	-17	NA	114469262	114415169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_189504_21	chr9	-	3797	18	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	1	-136	intron_retention	FALSE	canonical	3	162	junction_6	87.3841695021746	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGGTTTGT	NA	False	NA	-13	True	TATAAA	-17	NA	114469251	114415169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_189507_18	chr9	-	3869	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	1	-134	intron_retention	FALSE	canonical	3	27	junction_4	152.245953138051	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTGTGT	NA	False	NA	-11	True	TATAAA	-19	NA	114469251	114415167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114425672_114425740_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_18951_4	chr11	-	3839	2	Intergenic	novelGene_1850	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	79867140	79862805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79866420_79866915
Isoform_189511_17	chr9	-	1711	10	FSM	ENSMUSG00000056167.9	ENSMUST00000216785.2	1723	10	1	11	1	-11	multi-exon	FALSE	canonical	3	407	junction_3	40.9103204703612	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTGGGAAT	NA	False	NA	NA	False	NA	NA	NA	114469251	114446606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_189518_1439	chr9	-	986	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	0	7	0	-4	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCAGGTTTCCTTATTG	NA	False	NA	-21	True	AATAAA	-9	NA	114610917	114585910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
Isoform_189519_1112	chr9	-	1132	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	-144	5	-137	-2	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGGTTTCCTTATTGCA	NA	False	NA	-19	True	AATAAA	-11	NA	114611061	114585908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
Isoform_189520_34	chr9	-	1166	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	-180	7	-173	-4	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCAGGTTTCCTTATTG	NA	False	NA	-21	True	AATAAA	-9	NA	114611097	114585910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
Isoform_189524_28	chr9	-	1191	6	NNC	ENSMUSG00000032436.18	novel	993	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	2	11	junction_4	642.439226697748	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCCTTATTGCATGAGA	NA	False	NA	-14	True	AATAAA	-16	NA	114610917	114585903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_114586360_114587872_114587955_114590974_114591101_114591120_114591292_114592286_114592461_114610735
Isoform_18953_9	chr11	-	4294	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	-141	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	64.7674017274941	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAAGTGATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	86435600	86389837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_189536_4	chr9	-	1067	4	FSM	ENSMUSG00000041012.5	ENSMUST00000047013.4	1064	4	-4	1	0	-1	multi-exon	FALSE	canonical	2	4	junction_3	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAACGTGTGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	114673224	114618413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114618814_114619705_114619823_114625108_114625283_114672848
Isoform_189537_35	chr9	-	3912	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	45	434	45	-434	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGCCTATTTTTCC	NA	False	NA	-7	True	AATAAA	-20	NA	114763010	114728842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
Isoform_189538_133	chr9	-	3836	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	121	434	13	-434	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGCCTATTTTTCC	NA	False	NA	-7	True	AATAAA	-20	NA	114762934	114728842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
Isoform_189539_57	chr9	-	4265	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	121	5	13	-5	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATAACTTGATTGTTGT	NA	False	NA	NA	False	NA	NA	NA	114762934	114728413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
Isoform_18954_5	chr11	-	4427	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	64.7674017274941	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATAACAGTTATAAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	86435595	86389699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_189541_10	chr9	-	4398	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGATTGTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	114763062	114728408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
Isoform_18955_8	chr11	-	2397	6	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-9	1878	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	73.5129920490249	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTGTGGTCATAAAAA	NA	False	NA	-2	True	AATAAA	-13	NA	4391091	4372189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
Isoform_189567_939	chr9	-	4265	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-46	2	-46	-2	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGATTTCTGATACCT	NA	False	NA	-36	True	AATAAA	-19	NA	115139535	115071650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
Isoform_189571_533	chr9	-	4378	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-46	-111	-46	111	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGTCTCTTGCAGACC	NA	False	NA	-1	True	AATAAA	-20	NA	115139535	115071537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
Isoform_189595_3	chr9	-	4665	8	FSM	ENSMUSG00000032440.14	ENSMUST00000061101.12	8092	8	28	3399	28	1237	multi-exon	FALSE	canonical	1	1	junction_6	2.1189138534559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCCTCTTGTTGCTGTC	NA	False	NA	NA	False	AATAAA	-41	NA	116004305	115916759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960612_115960782_115987338_115987414_116004011
Isoform_189596_9	chr9	-	4604	7	FSM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	102	-1230	7	1230	multi-exon	FALSE	canonical	1	1	junction_6	1.95078331845327	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCACCTTGCCTCTTGT	NA	False	NA	NA	False	AATAAA	-34	NA	116004326	115916766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960612_115960782_116004011
Isoform_189597_39	chr9	-	506	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	90	573	76	0	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGAGTTCTGATTTAT	NA	False	NA	-7	True	AATAAA	-13	NA	117979155	117894162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_189598_43	chr9	-	484	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	113	572	99	1	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAGTTCTGATTTATT	NA	False	NA	-6	True	AATAAA	-14	NA	117979132	117894161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_189599_10	chr9	-	617	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	-20	572	-20	1	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAGTTCTGATTTATT	NA	False	NA	-6	True	AATAAA	-14	NA	117979265	117894161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_189600_6	chr9	-	1068	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	92	9	78	-9	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACCAGGAAGGCA	NA	False	NA	NA	False	ATTAAA	-8	NA	117979153	117893598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_189601_6	chr9	-	1046	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	114	9	100	-9	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACCAGGAAGGCA	NA	False	NA	NA	False	ATTAAA	-8	NA	117979131	117893598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_189602_3	chr9	-	1622	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	86	-539	72	539	multi-exon	TRUE	canonical	3	173	junction_1	9.03081145609604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGCTACTGTCGGTTG	NA	False	NA	NA	False	AATAAA	-18	NA	117979159	117893050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_189603_3	chr9	-	1593	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	113	-537	99	537	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGGCTACTGTCGGT	NA	False	NA	NA	False	AATAAA	-16	NA	117979132	117893052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_189604_4	chr9	-	2179	12	ISM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	11980	7	-1978	-7	3prime_fragment	FALSE	canonical	3	27	junction_4	6.22445191586316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAATCCTTCTAGTCTC	NA	False	NA	NA	False	TATAAA	-18	NA	118905349	118900601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151
Isoform_189605_100	chr9	-	2704	15	FSM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	0	2	0	-2	multi-exon	TRUE	canonical	3	27	junction_4	6.31163486696415	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTCTAGTCTCTTTAC	8079	False	NA	NA	False	TATAAA	-23	NA	118917329	118900596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
Isoform_189606_22	chr9	-	2645	15	FSM	ENSMUSG00000010660.4	ENSMUST00000010804.4	2657	15	5	7	5	-7	multi-exon	FALSE	canonical	3	6	junction_14	9.15540433686184	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAATCCTTCTAGTCTC	2843	False	NA	NA	False	TATAAA	-18	NA	118922565	118900601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
Isoform_189608_3	chr9	-	1306	7	NNC	ENSMUSG00000092212.4	novel	1458	6	NA	NA	7945	-2	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_2	1.89296944860009	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGAGTTGTACTGTCTA	NA	False	NA	NA	False	NA	NA	NA	119052813	119049555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_119049990_119050186_119050403_119051512_119051622_119051804_119052020_119052238_119052334_119052418_119052540_119052697
Isoform_189627_464	chr9	-	4625	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	14	8	14	-8	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAATGCTTTCATTTA	5586	False	NA	39	True	AATAAA	-21	NA	119151479	119067505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
Isoform_18963_17	chr11	-	1708	14	NNC	ENSMUSG00000020516.16	novel	3250	10	NA	NA	2	-3168	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	66.844958827948	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTGTGTGCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	86435598	86396592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_86397008_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_189635_13	chr9	-	4929	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	-288	6	-288	-6	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5284	False	NA	41	True	AATAAA	-23	NA	119151781	119067503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
Isoform_18964_12	chr11	-	2246	13	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	-5	2795	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	56.7731230425102	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTATATTGCTTT	NA	False	NA	NA	False	NA	NA	NA	33463751	33419620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_33420267_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_189641_9	chr9	-	4531	17	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-1	-8	combination_of_known_splicesites	FALSE	canonical	3	12	junction_15	69.1425158639748	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAATGCTTTCATTTA	5571	False	NA	39	True	AATAAA	-21	NA	119151494	119067505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119133870_119133984_119151070
Isoform_189646_18	chr9	-	2909	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	-951	2	419	-2	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGACTGACGGTATG	NA	False	NA	-1	True	AATAAA	-24	NA	119170058	119165001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
Isoform_189647_55	chr9	-	1909	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	42	9	3	3	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGTACTTGTGACTGA	NA	False	NA	-8	True	AATAAA	-17	NA	119169065	119165008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
Isoform_18965_9	chr11	-	2934	4	Intergenic	novelGene_2372	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	81.0198878191165	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTGCTTGGTTCC	NA	False	NA	0	True	NA	NA	NA	121816149	121795182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121797835_121798775_121798837_121799014_121799142_121816055
Isoform_189650_482	chr9	-	2560	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	14	1332	-1	-1332	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTTGTAACTAAAGCTT	NA	False	NA	-1	True	AATAAA	-18	NA	119766617	119755654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
Isoform_189651_7	chr9	-	3470	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	14	422	-1	-422	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACTCACTGTGAGATC	NA	False	NA	NA	False	TATAAA	-38	NA	119766617	119754744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
Isoform_189659_54	chr9	-	2990	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	38	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	8.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119812807	119800229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119812684
Isoform_18966_6	chr11	-	984	2	Intergenic	novelGene_1446	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATCATTATTTAAT	NA	False	NA	NA	False	AATACA	-22	NA	33487241	33482576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_33483454_33487134
Isoform_189660_7	chr9	-	3320	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-292	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813137	119800229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119812684
Isoform_189662_8	chr9	-	3131	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-105	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	8.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGGTCTTCTTGGTG	NA	False	NA	-1	True	AATAAA	-14	NA	119812950	119800231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119812684
Isoform_189663_29	chr9	-	3097	5	FSM	ENSMUSG00000032515.9	ENSMUST00000035101.9	2906	5	-192	1	23	-1	multi-exon	FALSE	canonical	1	1	junction_4	11.4972822875669	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813701	119800229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813471
Isoform_189664_26	chr9	-	2974	6	NNC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	12.9676520619579	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813742	119800229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813471_119813536_119813699
Isoform_189665_395	chr9	-	2943	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-51	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813775	119800229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
Isoform_189666_115	chr9	-	2975	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-83	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813807	119800229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
Isoform_189669_11	chr9	-	2978	5	NNC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.9268604418766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813745	119800229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813634
Isoform_189672_14	chr9	-	4112	37	FSM	ENSMUSG00000040936.16	ENSMUST00000171923.8	4103	37	-10	1	-10	-1	multi-exon	FALSE	canonical	2	8	junction_10	8.07583653886513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCATGTGTCAAACCCTC	NA	False	NA	-2	True	AATAAA	-15	NA	121106273	120793520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
Isoform_189673_10	chr9	-	4079	37	NIC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	-1	-1	combination_of_known_junctions	TRUE	canonical	2	8	junction_10	8.02772971919486	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCATGTGTCAAACCCTC	NA	False	NA	-2	True	AATAAA	-15	NA	121106237	120793520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086488_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
Isoform_189675_7	chr9	-	2949	25	ISM	ENSMUSG00000040936.16	ENSMUST00000051479.13	3898	34	0	83146	0	34	5prime_fragment	FALSE	canonical	3	16	junction_16	5.64564114064017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTCTCCTGAT	NA	False	NA	NA	False	AATAAA	-16	NA	121106238	120985882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
Isoform_189676_13	chr9	-	2952	25	NIC	ENSMUSG00000040936.16	novel	3898	34	NA	NA	0	34	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	5.47579902845238	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTCTCCTGAT	NA	False	NA	NA	False	AATAAA	-16	NA	121106238	120985882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086488_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
Isoform_189679_4	chr9	-	2522	6	FSM	ENSMUSG00000061536.14	ENSMUST00000139193.2	938	6	-58	-1526	-8	9	multi-exon	FALSE	canonical	2	3	junction_4	7.62627038597505	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTATTGTTTTCCTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	121534103	121512090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121524599_121524809_121533989
Isoform_189680_7	chr9	-	2600	15	ISM	ENSMUSG00000079235.11	ENSMUST00000135986.9	2640	16	5497	0	-2885	0	3prime_fragment	FALSE	canonical	1	2	junction_4	1.88034951158403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAGCTCTCGTGGAGTGT	NA	False	NA	NA	False	NA	NA	NA	121663030	121626692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_121627306_121628091_121628207_121629568_121629718_121637217_121637341_121638146_121638231_121639159_121639288_121642351_121642559_121643235_121643413_121645658_121645821_121648560_121648666_121649725_121649843_121654033_121654124_121656298_121656442_121659942_121660092_121662792
Isoform_189681_4	chr9	-	2667	16	FSM	ENSMUSG00000079235.11	ENSMUST00000135986.9	2640	16	-27	0	-27	0	multi-exon	FALSE	canonical	1	2	junction_4	1.82086670449969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAGCTCTCGTGGAGTGT	6553	False	NA	NA	False	NA	NA	NA	121668554	121626692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121627306_121628091_121628207_121629568_121629718_121637217_121637341_121638146_121638231_121639159_121639288_121642351_121642559_121643235_121643413_121645658_121645821_121648560_121648666_121649725_121649843_121654033_121654124_121656298_121656442_121659942_121660092_121662792_121663020_121668476
Isoform_189682_3	chr9	-	2451	14	ISM	ENSMUSG00000079235.11	ENSMUST00000135986.9	2640	16	5479	953	-2903	1	internal_fragment	FALSE	canonical	1	2	junction_3	1.94601702164208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCCATATATAT	NA	False	NA	NA	False	NA	NA	NA	121663048	121627645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_121628207_121629568_121629718_121637217_121637341_121638146_121638231_121639159_121639288_121642351_121642559_121643235_121643413_121645658_121645821_121648560_121648666_121649725_121649843_121654033_121654124_121656298_121656442_121659942_121660092_121662792
Isoform_189683_51	chr9	-	517	4	NIC	ENSMUSG00000038412.9	novel	605	5	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	216	junction_3	942.112637757409	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686692	121678603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_121678756_121679253_121679389_121681556_121681672_121686577
Isoform_18969_4	chr11	-	687	3	Intergenic	novelGene_1449	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTTGGCTCAAAATCG	NA	False	NA	-13	True	AATAAA	-14	NA	33494286	33487371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_33487917_33490994_33491103_33494252
Isoform_189690_484	chr9	-	459	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	798	975	-2	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686630	121678603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
Isoform_189691_201	chr9	-	521	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	736	975	-13	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686692	121678603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
Isoform_189692_42	chr9	-	866	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	390	976	-359	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACGGTATTGAATATT	NA	False	NA	-26	True	AATAAA	-19	NA	121687038	121678604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
Isoform_189694_19	chr9	-	1497	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	736	-1	-13	1	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGATGTCTTGTTTTTA	NA	False	NA	-2	True	ATTAAA	-14	NA	121686692	121677627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
Isoform_189695_48	chr9	-	1453	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	781	-2	-14	2	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGATGTCTTGTTTTTAT	NA	False	NA	-1	True	ATTAAA	-15	NA	121686647	121677626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
Isoform_189699_12	chr9	-	1997	3	FSM	ENSMUSG00000038412.9	ENSMUST00000215007.2	1980	3	-14	-3	-13	3	multi-exon	FALSE	canonical	3	2040	junction_2	90	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTTGTTTTTATT	NA	False	NA	0	True	ATTAAA	-16	NA	121686692	121677625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121679389_121681556_121681676_121686577
Isoform_18970_3	chr11	-	1245	4	Intergenic	novelGene_1448	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_2	5.79271573232759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGCTCAAAATCGTGG	NA	False	NA	-10	True	AATAAA	-17	NA	33494291	33487368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_33487917_33490994_33491103_33492017_33492568_33494252
Isoform_189700_16	chr9	-	2397	3	FSM	ENSMUSG00000066235.8	ENSMUST00000217610.2	2413	3	13	3	5	0	multi-exon	FALSE	canonical	2	4	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	-3	True	ATTAAA	-18	NA	121825066	121810674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121812890_121813165_121813223_121824941
Isoform_189701_7	chr9	-	2473	3	NIC	ENSMUSG00000066235.8	novel	2504	4	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	-3	True	ATTAAA	-18	NA	121825093	121810674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_121812890_121823910_121824017_121824941
Isoform_189702_63	chr9	-	2359	2	FSM	ENSMUSG00000066235.8	ENSMUST00000084743.7	2365	2	16	-10	0	7	multi-exon	FALSE	canonical	3	12	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATGCCTTGTTAGCA	NA	False	NA	7	True	ATTAAA	-28	NA	121825075	121810664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_121812890_121824941
Isoform_189703_84	chr9	-	2602	13	FSM	ENSMUSG00000037949.9	ENSMUST00000042546.4	2653	13	33	18	-4	0	multi-exon	FALSE	canonical	3	21	junction_1	6.44797556515911	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCTTCTCCAAGACTT	NA	False	NA	-15	True	ATTAAA	-19	NA	122123456	122004957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
Isoform_189713_4	chr9	-	6353	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	11	-15	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	60.070560362146	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTCTGACATCTATATA	NA	False	NA	-9	True	AATAAA	-20	NA	122694988	122677989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694801
Isoform_189717_3	chr9	-	5926	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	11	-316	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	36.0262250157977	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACTAGTGTCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	122695039	122678290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694978
Isoform_189718_10	chr9	-	6504	6	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	8	-18	intron_retention	FALSE	canonical	3	118	junction_3	25.3929123969662	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	-12	True	AATAAA	-17	NA	122695042	122677992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_122683054_122683771_122683883_122685763_122686227_122686534_122686704_122690773_122691410_122694978
Isoform_189719_4	chr9	-	821	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	-10	2550	-10	-104	multi-exon	FALSE	canonical	3	36	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTTTGTCCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	122780075	122776703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_122777174_122777989_122778135_122779869
Isoform_189721_19	chr9	-	881	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	28	2452	4	-6	multi-exon	FALSE	canonical	3	36	junction_2	10	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATCTGTCTTAGTCAC	NA	False	NA	NA	False	ATTAAA	-21	NA	122780037	122776605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_122777174_122777989_122778135_122779869
Isoform_189724_47	chr9	-	4777	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	-45	644	-12	-644	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGGGGTCCAGCTTT	8726	False	NA	NA	False	AATAAA	-11	NA	122942257	122895868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
Isoform_18973_6	chr11	-	3014	5	NNC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	118.182856201735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATCAGAGGAGCCGGG	NA	False	NA	-10	True	NA	NA	NA	59340839	59297972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_59299754_59312350_59312476_59319166_59319640_59328803_59329340_59340740
Isoform_189731_68	chr9	-	2487	8	FSM	ENSMUSG00000025786.18	ENSMUST00000026892.15	2492	8	5	0	3	0	multi-exon	FALSE	canonical	3	31	junction_6	109.785505158273	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8743	False	NA	-1	True	AATAAA	-16	NA	122942240	122905896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
Isoform_189735_42	chr9	-	2458	7	NIC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	97.6774738048077	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8724	False	NA	-1	True	AATAAA	-16	NA	122942259	122905896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929323_122929658_122942060
Isoform_189739_642	chr9	-	2454	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	11	4522	10	0	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8724	False	NA	-1	True	AATAAA	-16	NA	122942259	122905896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
Isoform_18974_13	chr11	-	166	2	Intergenic	novelGene_1875	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	12	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	80179042	80177018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80177135_80178992
Isoform_189741_35	chr9	-	5126	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	28	1833	1	-1833	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGTGAGTCTGTGC	8741	False	NA	0	True	AATACA	-27	NA	122942242	122903207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
Isoform_189747_14	chr9	-	2303	6	FSM	ENSMUSG00000025786.18	ENSMUST00000155778.8	1633	6	-2	-668	-2	0	multi-exon	FALSE	canonical	3	7	junction_4	109.405667129267	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8750	False	NA	-1	True	AATAAA	-16	NA	122942233	122905896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122929327_122929658_122942060
Isoform_189749_7	chr9	-	5330	9	FSM	ENSMUSG00000035498.11	ENSMUST00000039229.8	5310	9	-22	2	-22	-2	multi-exon	FALSE	canonical	2	3	junction_2	1.31695671910659	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGTTCATTTGTTTA	6309	False	NA	NA	False	AATAAA	-16	NA	123045125	122999890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_123002992_123004799_123004885_123006752_123007119_123009049_123009431_123011229_123011452_123012521_123012891_123014117_123014481_123018985_123019196_123044892
Isoform_189752_8	chr9	-	3479	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	12	579	12	-579	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGATTATAAAACTTTGGT	NA	False	NA	NA	False	ATTAAA	-20	NA	123546678	123526655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
Isoform_189754_8	chr9	-	1420	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	7	2643	7	398	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTAATTTATCTAATC	NA	False	NA	0	True	AATAAA	-18	NA	123546683	123528719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
Isoform_189756_39	chr9	-	3455	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	64	551	-8	-551	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTGGTTATGCATAAGT	NA	False	NA	NA	False	TATAAA	-17	NA	123546626	123526627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
Isoform_189759_8	chr9	-	4626	18	FSM	ENSMUSG00000025241.17	ENSMUST00000167595.9	7692	18	0	3066	0	-3066	multi-exon	FALSE	canonical	3	23	junction_5	6.23584903191129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTTTAAATATTAAAAAA	9310	False	NA	NA	False	ATTAAA	-25	NA	123680964	123621640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
Isoform_189760_5	chr9	-	430	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	-56	87	-56	-87	multi-exon	FALSE	canonical	3	27	junction_1	43.70608907489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCAGACTTTCTCCGT	NA	False	NA	NA	False	NA	NA	NA	124044825	124033074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
Isoform_189761_4	chr9	-	529	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	-57	-11	-57	11	multi-exon	FALSE	canonical	3	27	junction_1	43.70608907489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGTACTGGAATGTGAAA	NA	False	NA	NA	False	NA	NA	NA	124044826	124032976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
Isoform_189762_7	chr9	-	275	3	NNC	ENSMUSG00000110834.2	novel	461	4	NA	NA	10642	-626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAATGTCAGGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	124034127	124033613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_124033625_124033680_124033817_124033999
Isoform_189764_4	chr9	-	2663	5	FSM	ENSMUSG00000074829.11	ENSMUST00000185949.2	634	5	1	-2030	1	-9	multi-exon	FALSE	non_canonical	0	0	junction_2	8.44097150806707	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATGATATACTATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	124075300	124054442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_124056732_124057727_124057789_124057987_124058115_124074305_124074381_124075189
Isoform_189773_95	chr9	-	3056	11	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	112.525063874676	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2176	False	NA	-12	True	NA	NA	NA	58157044	58125823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_189780_72	chr9	-	2918	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2176	False	NA	-12	True	NA	NA	NA	58157044	58125823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_189782_14	chr9	-	3379	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTGATTGCAATCTCT	2179	False	NA	-2	True	AGTAAA	-22	NA	58157041	58125359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_189787_29	chr9	-	709	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGGAGTGATGGCGTCAC	NA	False	NA	0	True	AATAAA	-16	NA	124198153	124195693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_124196190_124197940
Isoform_189788_16	chr9	-	899	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	70	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124198150	124195500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_124196190_124197940
Isoform_189789_9	chr9	-	2171	14	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	-25	-971	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	42.465997536212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTCTCCTCTTTCTGG	8492	False	NA	NA	False	ACTAAA	-15	NA	49710250	49443546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_49443699_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_189790_6	chr9	-	2462	14	NNC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	-1	-653	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	42.465997536212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCACGAATTTTCTCC	8519	False	NA	NA	False	AATAAA	-13	NA	49710223	49443228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_49443699_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_189791_13	chr9	-	2227	14	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	0	-887	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	42.465997536212	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTCTGTGATTTTGTT	8520	False	NA	NA	False	NA	NA	NA	49710222	49443462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_49443699_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_189792_5	chr9	-	3114	14	NNC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	42.465997536212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGGTGACGAAATAATTA	8520	False	NA	NA	False	AATAAA	-22	NA	49710222	49442575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_49443699_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_189796_5	chr9	-	3649	6	NNC	ENSMUSG00000059820.15	novel	1225	6	NA	NA	34	0	intron_retention	FALSE	canonical	2	9	junction_1	45.3431361950185	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTGTTACTTTTTAA	140	False	NA	-3	True	AATAAA	-17	NA	50528530	50516539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_50519234_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
Isoform_1898_7	chr10	-	728	5	FSM	ENSMUSG00000051736.9	ENSMUST00000063204.9	745	5	1	16	1	0	multi-exon	FALSE	canonical	3	17	junction_3	5.93190525885234	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGGTGATGACAATGGT	NA	False	NA	-18	True	AATAAA	-13	NA	39009901	38994815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_38995031_38996253_38996393_38998172_38998332_39008242_39008375_39009818
Isoform_18980_7	chr11	-	642	7	NNC	ENSMUSG00000034621.15	novel	390	6	NA	NA	18	10100	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	58.3628496753048	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATAGGCACTCTGAT	678	False	NA	NA	False	AATAAA	-34	NA	102446984	102388219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_102388336_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
Isoform_189800_3	chr9	-	2377	6	NNC	ENSMUSG00000059820.15	novel	732	7	NA	NA	0	-749	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	45.4990109782619	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCCAGATGTGCC	89	False	NA	NA	False	AATAAA	-19	NA	50528581	50517292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_50519234_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
Isoform_189802_10	chr9	-	1562	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_5	6.15142259969188	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCGCTGTCTCATCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	34901172	34889332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34901035
Isoform_189803_4	chr9	-	1607	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_5	6.40624695121879	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCGCTGTCTCATCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	34899970	34889332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34899788
Isoform_189804_3	chr9	-	1571	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_5	6.15142259969188	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCGCTGTCTCATCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	34901172	34889332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895970_34896290_34896441_34901035
Isoform_189805_3	chr9	-	1972	7	NNC	ENSMUSG00000003410.9	novel	5014	7	NA	NA	5	-1570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.80277563773199	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	285	False	NA	NA	False	NA	NA	NA	21963314	21929326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21930130_21935969_21936009_21937468_21937695_21937803_21937958_21947607_21947712_21947936_21948154_21962885
Isoform_189807_11	chr9	-	1979	7	NNC	ENSMUSG00000003410.9	novel	5014	7	NA	NA	-2	-1573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.73205080756888	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAACAAAAAACA	278	False	NA	NA	False	NA	NA	NA	21963321	21929329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21930130_21935969_21936009_21937468_21937695_21937803_21937958_21947607_21947712_21947936_21948157_21962885
Isoform_189809_4	chr9	-	1469	10	NNC	ENSMUSG00000079469.11	novel	664	6	NA	NA	-4	-2243	at_least_one_novel_splicesite	FALSE	non_canonical	3	21	junction_1	14.7103725897203	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCAGGTGTGGTGTAA	NA	False	NA	NA	False	NA	NA	NA	72946937	72927135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_72927451_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
Isoform_18981_6	chr11	-	1653	2	Intergenic	novelGene_1612	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCAGTTTCATCGCTTCT	8052	False	NA	NA	False	NA	NA	NA	61288519	61281954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_61283397_61288308
Isoform_189810_11	chr9	-	1883	15	NNC	ENSMUSG00000032198.10	novel	1868	15	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	52.93955929903	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGCCTCTGTTCTCTT	6277	False	NA	-5	True	NA	NA	NA	21763910	21748643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21748864_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_189811_6	chr9	-	2608	3	NNC	ENSMUSG00000110803.2	novel	1387	4	NA	NA	12	-105977	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59848348	59839516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_59841973_59847284_59847361_59848272
Isoform_189816_6	chr9	-	880	2	Antisense	novelGene_ENSMUSG00000041444.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGATGATATATGATATA	NA	False	NA	NA	False	NA	NA	NA	32047578	32046600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_32046898_32046995
Isoform_189817_12	chr9	-	1198	3	Intergenic	novelGene_11272	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	8.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTGAAGAGAAGGCTG	NA	False	NA	NA	False	TTTAAA	-9	NA	53788490	53775947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_53776927_53777088_53777180_53788362
Isoform_189820_7	chr9	-	1800	15	NNC	ENSMUSG00000032198.10	novel	1868	15	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	52.93955929903	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGCCTCTGTTCTCTTT	6273	False	NA	-4	True	NA	NA	NA	21763914	21748642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21748776_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_189822_3	chr9	-	1147	4	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGATGTCGGATGCAT	2309	False	NA	NA	False	ATTAAA	-16	NA	34946523	34915701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_34916338_34916907_34916944_34945368_34945540_34946219
Isoform_189823_5	chr9	-	3114	6	NNC	ENSMUSG00000032311.18	novel	721	6	NA	NA	-28	1161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.20869154657707	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTAAGAGCTTAAGT	219	False	NA	NA	False	AATAAA	-12	NA	55149773	55126344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_55128897_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55149663
Isoform_189824_3	chr9	-	870	2	Intergenic	novelGene_11773	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCTATCGTACAATGC	NA	False	NA	NA	False	ATTAAA	-15	NA	124239748	124203001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_124203757_124239633
Isoform_189825_3	chr9	-	482	4	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	17.1464281994822	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATTGGCTCAAAGCTT	NA	False	NA	NA	False	CATAAA	-21	NA	40151203	40107261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_40107440_40108832_40108959_40121021_40121120_40151123
Isoform_189826_5	chr9	-	839	2	Intergenic	novelGene_11333	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAGTATCAGTATTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	59182457	59181494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_59182170_59182293
Isoform_189828_4	chr9	-	290	2	Intergenic	novelGene_11166	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGCCTGTGTCTTAGT	NA	False	NA	NA	False	AATAAA	-8	NA	30940784	30940274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_30940444_30940663
Isoform_189829_3	chr9	-	2600	2	Intergenic	novelGene_11305	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTTTATGTAATTCTG	NA	False	NA	NA	False	NA	NA	NA	57411203	57407492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_57409882_57410992
Isoform_18983_6	chr11	-	1772	8	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	272	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	95.9908584082838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTGGTCTTTA	NA	False	NA	-5	True	AATAAA	-19	NA	77784650	77771443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_77772130_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
Isoform_189830_4	chr9	-	949	4	NNC	ENSMUSG00000037410.14	novel	3473	3	NA	NA	-12	13	intron_retention	FALSE	canonical	3	8	junction_1	32.9679979508749	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATAACTTTGTATTGGAA	NA	False	NA	NA	False	AATAAA	-31	NA	90152836	90120319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_90120514_90123062_90123232_90131843_90131998_90152404
Isoform_189831_3	chr9	-	3875	20	NNC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	-6	-37433	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.61583930796121	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTATGTTTTTTTG	NA	False	NA	NA	False	TATAAA	-19	NA	121106269	121026874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_121028712_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
Isoform_189832_3	chr9	-	928	3	NNC	ENSMUSG00000087135.8	novel	639	3	NA	NA	-199	-10	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCATATAATTCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	40694956	40692053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_40692489_40694218_40694287_40694531
Isoform_189834_4	chr9	-	688	3	Intergenic	novelGene_11273	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	11.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCCTAAGCTCTGAAG	NA	False	NA	NA	False	NA	NA	NA	53788489	53775956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_53776427_53777088_53777180_53788362
Isoform_189835_3	chr9	-	3187	26	NNC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.3316195048462	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTGCTGCTGCTTT	6271	False	NA	NA	False	NA	NA	NA	21763916	21734739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_21734853_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_189838_3	chr9	-	5545	14	NNC	ENSMUSG00000043154.16	novel	2333	12	NA	NA	-27	955	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10.4649315764322	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGGTAGCTTTGTTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	101129021	101000488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_101002107_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
Isoform_189839_3	chr9	-	2457	2	Genic_Genomic	ENSMUSG00000098832.3	novel	1187	1	NA	NA	-3483	973	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTAAAGTGTGGTTAATA	NA	False	NA	NA	False	AATAAA	-14	NA	14366801	14361158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_14363533_14366718
Isoform_18984_4	chr11	-	2247	13	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	-18	2796	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	58.5083090015617	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTATATTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	33463764	33419619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_33420254_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_189840_4	chr9	+	1592	10	NIC	ENSMUSG00000038775.15	novel	1645	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	5.59982363037962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	False	NA	3	True	AATAAA	-16	NA	118892554	118900394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_118892670_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
Isoform_189841_3	chr9	+	1371	9	NIC	ENSMUSG00000038775.15	novel	1411	9	NA	NA	45	5	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	9.33993442161132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCACGTGTGCCTGTGT	NA	False	NA	8	True	AATAAA	-21	NA	118892594	118900399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_118892670_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118899345_118899418_118899624_118899883_118900201
Isoform_189845_23	chr9	+	3569	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	2	4103	2	122	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTGTCTATTTTTT	-6	True	NA	NA	False	TTTAAA	-39	NA	3335479	3387051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_189846_5	chr9	+	3911	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	0	3763	0	-446	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTAGCAAAATTATAGT	-8	True	NA	NA	False	NA	NA	NA	3335477	3387391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_189847_3	chr9	+	7665	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	3	6	3	-6	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTTTTTGTCATAGTA	-5	True	NA	NA	False	NA	NA	NA	3335480	3391148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_189850_4	chr9	+	2559	11	NIC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	19.3713706278105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTATACTTT	-7	True	NA	NA	False	AATATA	-34	NA	3335478	3386176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_3335595_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_189851_3	chr9	+	3433	11	NIC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	2	122	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	19.3713706278105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTGTCTATTTTTT	-6	True	NA	NA	False	TTTAAA	-39	NA	3335479	3387051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_3335595_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_189855_18	chr9	+	3713	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	10	-120	-5	120	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGTTGTCTATTTT	2	True	NA	NA	False	TTTAAA	-37	NA	3335487	3387049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_189856_3	chr9	+	4062	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	-1	-458	-1	-450	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATAATTGTAGCAAAATTA	-9	True	NA	NA	False	NA	NA	NA	3335476	3387387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_18986_6	chr11	-	1748	10	NNC	ENSMUSG00000017132.18	novel	545	6	NA	NA	2	3868	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	11.5256022043466	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGTCCGAGTTTAGG	8602	False	NA	NA	False	AATAAA	-21	NA	118139416	118071929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_118072737_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
Isoform_189860_6	chr9	+	5654	3	FSM	ENSMUSG00000025898.7	ENSMUST00000212644.2	2085	3	-2	-3567	-2	3567	multi-exon	FALSE	canonical	3	277	junction_2	20.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	7	True	NA	NA	False	AATACA	-19	NA	3404085	3416766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_3404191_3409965_3410077_3411328
Isoform_189863_195	chr9	+	4019	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	497	-70	1	70	multi-exon	FALSE	canonical	3	200	junction_7	32.0504576240346	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATATCCTGCTCACTGC	10	True	NA	19	True	ATTAAA	-19	NA	3404088	3479306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
Isoform_189864_255	chr9	+	3841	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	497	108	1	-108	multi-exon	FALSE	canonical	3	200	junction_7	32.0504576240346	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGAATCTGTAGC	10	True	NA	13	True	TATAAA	-14	NA	3404088	3479128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
Isoform_189869_12	chr9	+	3930	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	1	-109	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_9	81.3321379693579	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTACTGAATCTGTAG	10	True	NA	12	True	TATAAA	-13	NA	3404088	3479127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3440578_3440669_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
Isoform_189871_4	chr9	+	3915	6	NNC	ENSMUSG00000041624.11	novel	2897	5	NA	NA	-456	492	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	6.79411510058521	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCTTCATATTTATTT	-3	True	NA	NA	False	AATAAA	-16	NA	3532321	3761669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395_3761205_3761244
Isoform_189873_5	chr9	+	793	4	FSM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	-119	1639	-117	-1639	multi-exon	FALSE	canonical	3	18	junction_1	18.4571575998762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTGCATTTGTTATCT	NA	False	NA	NA	False	AATAAA	-18	NA	4309715	4330072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_4309935_4313701_4313807_4316826_4317072_4329848
Isoform_189874_12	chr9	+	690	3	FSM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	-119	1660	-119	-1639	multi-exon	TRUE	canonical	3	30	junction_1	14.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTGCATTTGTTATCT	NA	False	NA	NA	False	AATAAA	-18	NA	4309713	4330072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_4309935_4316826_4317072_4329848
Isoform_189877_156	chr9	+	2802	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	-8	6	-8	3	multi-exon	FALSE	canonical	3	88	junction_1	13	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTTTCCTGTCTGAA	-13	True	NA	8	True	ATTAAA	-16	NA	4376553	4386864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_4376624_4383536_4384143_4384738
Isoform_18988_7	chr11	-	359	2	Antisense	novelGene_ENSMUSG00000048070.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAATAAATGGGCATTA	NA	False	NA	NA	False	AATATA	-1	NA	66804944	66789247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_66789509_66804846
Isoform_189888_963	chr9	+	1217	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	30	1174	-1	-9	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGTGAAGATGTCCGT	9	True	NA	15	True	AATAAA	-23	NA	7184549	7207031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
Isoform_189893_14	chr9	+	1115	7	FSM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	-1	8	-1	-8	multi-exon	FALSE	canonical	3	18	junction_6	367.438165621857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGAAGATGTCCGTT	9	True	NA	16	True	AATAAA	-24	NA	7184549	7207032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7206719
Isoform_189896_415	chr9	+	2831	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	73	3	-35	2	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTAGTGTTTTGTT	-3	True	NA	13	True	AATAAA	-16	NA	7764114	7794331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
Isoform_189897_102	chr9	+	2868	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	37	2	37	-2	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTAGTGTTTTGTTG	-39	True	NA	14	True	AATAAA	-17	NA	7764078	7794332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
Isoform_1899_6	chr10	-	1936	6	NIC	ENSMUSG00000087177.8	novel	503	5	NA	NA	-30	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	5.31413210223457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGTTTTTTCAGCATA	5785	False	NA	0	True	AATAAA	-17	NA	39607875	39497408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_39498724_39508945_39509013_39515559_39515763_39516375_39516508_39557468_39557546_39607733
Isoform_189902_16	chr9	+	1153	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	0	1216	0	1014	multi-exon	FALSE	canonical	3	27	junction_1	5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGAATTCATTTCCCT	NA	False	NA	4	True	AATAAA	-16	NA	13246609	13253208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13246677_13251695_13252424_13252850
Isoform_189903_5	chr9	+	4250	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	1	-1882	1	1585	multi-exon	FALSE	canonical	3	27	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGTGTTCAGAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	13246610	13256306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13246677_13251695_13252424_13252850
Isoform_189904_3	chr9	+	4527	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	13	-2171	13	1874	multi-exon	FALSE	canonical	3	27	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAACCTCTGCTTACCA	NA	False	NA	NA	False	AATAAA	-10	NA	13246622	13256595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13246677_13251695_13252424_13252850
Isoform_189905_7	chr9	+	4576	8	FSM	ENSMUSG00000079084.13	ENSMUST00000217444.4	4816	8	73	167	-1	-3	multi-exon	FALSE	canonical	2	4	junction_3	11.4944529656523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTCTCTTTCTCTGTG	NA	False	NA	NA	False	ATTAAA	-23	NA	13246608	13292700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13246677_13251695_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700
Isoform_189908_115	chr9	+	3186	17	NIC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_4	125.44469336624	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660482	13717776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_13660697_13671713_13671785_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
Isoform_189910_183	chr9	+	3081	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	6	1	2	0	multi-exon	FALSE	canonical	3	129	junction_2	100.813138473559	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660482	13717776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
Isoform_189914_172	chr9	+	3122	16	FSM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	-17	1	-1	0	multi-exon	FALSE	canonical	3	121	junction_3	100.823057327622	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660475	13717776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
Isoform_189917_449	chr9	+	3010	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	777	1	2	0	multi-exon	FALSE	canonical	3	316	junction_2	44.4939803312121	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660482	13717776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
Isoform_18992_4	chr11	-	1350	5	NNC	ENSMUSG00000081007.2	novel	370	3	NA	NA	-3072	514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.08972473588517	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGATCCTGTTCTATTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94722828	94718497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94719193_94719372_94719572_94719710_94719795_94720273_94720297_94722479
Isoform_189923_27	chr9	+	3996	16	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	1	2415	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_15	101.361311926965	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTTTTGATACGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	13660481	13720192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670_13718567_13719997
Isoform_189931_6	chr9	+	3726	11	FSM	ENSMUSG00000037808.14	ENSMUST00000156680.2	3760	11	23	11	4	-11	multi-exon	FALSE	canonical	2	6	junction_8	54.6652540467892	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGTAATGAATGACT	NA	False	NA	NA	False	AATAAA	-24	NA	13739034	13757826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935_13751038_13755324
Isoform_189932_3	chr9	+	2500	11	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	2	-1255	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	54.6652540467892	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATCCGTGCTTATGTCT	NA	False	NA	1	True	ATTAAA	-13	NA	13739013	13756582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748135_13748269_13750935_13751038_13755324
Isoform_189936_130	chr9	+	3636	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	55	11	36	-11	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGTAATGAATGACT	NA	False	NA	NA	False	AATAAA	-24	NA	13739066	13757826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
Isoform_189937_54	chr9	+	2428	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	21	1253	2	-1253	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCGTGCTTATGTCTGA	NA	False	NA	3	True	ATTAAA	-15	NA	13739032	13756584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
Isoform_189939_20	chr9	+	3686	10	NNC	ENSMUSG00000037808.14	novel	3702	10	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	37.2677996249965	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCTGTAATGAATGAC	NA	False	NA	NA	False	AATAAA	-23	NA	13739012	13757825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748135_13748269_13750935_13751038_13755324
Isoform_18994_5	chr11	-	1291	6	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-70	-3641	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	23.2430634813916	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGATTTTTGGTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	5211628	5158473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_5159037_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
Isoform_189940_6	chr9	+	3797	11	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	9	-11	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	54.2867387121385	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGTAATGAATGACT	NA	False	NA	NA	False	AATAAA	-24	NA	13739039	13757826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13742929_13743064_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
Isoform_189941_9	chr9	+	1789	5	ISM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	23	17570	23	-1077	5prime_fragment	FALSE	canonical	3	46	junction_3	6.75925291729789	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTCTTTTTTTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	14187619	14226827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791
Isoform_189942_125	chr9	+	2131	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	30	6964	30	320	multi-exon	FALSE	canonical	3	39	junction_6	6.49976257875985	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCAAGCAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	14187626	14237433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
Isoform_189943_12	chr9	+	2160	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	0	6965	0	319	multi-exon	FALSE	canonical	3	39	junction_6	6.49976257875985	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGCTCAAGCAGTTGTT	NA	False	NA	NA	False	NA	NA	NA	14187596	14237432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
Isoform_189947_24	chr9	+	806	7	FSM	ENSMUSG00000004096.10	ENSMUST00000213913.2	831	7	33	-8	33	8	multi-exon	FALSE	canonical	3	58	junction_1	320.421423891863	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGACTTTTTTTTTTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	14411975	14421669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_189948_12	chr9	+	999	7	FSM	ENSMUSG00000004096.10	ENSMUST00000213913.2	831	7	30	-198	30	1	multi-exon	FALSE	canonical	3	58	junction_1	320.421423891863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTGCTACAATTTATA	NA	False	NA	-11	True	AATAAA	-32	NA	14411972	14421859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_18995_7	chr11	-	758	4	NNC	ENSMUSG00000083227.2	novel	354	3	NA	NA	-4274	-179	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTGGTTGTTTTGAAA	NA	False	NA	-1	True	AATAAA	-17	NA	94692877	94688053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_94688355_94688551_94688636_94689121_94689145_94692527
Isoform_189954_149	chr9	+	1016	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	63	32	33	-17	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCACTGTCCCCAAC	NA	False	NA	-4	True	AATAAA	-14	NA	14411975	14421841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_189955_505	chr9	+	843	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	64	204	34	8	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGACTTTTTTTTTTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	14411976	14421669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_189957_88	chr9	+	1086	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	63	-38	33	38	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAACTACTTTTGTG	NA	False	NA	41	True	TATAAA	-22	NA	14411975	14421911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_189959_12	chr9	+	911	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	-4	204	-4	8	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGACTTTTTTTTTTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	14411908	14421669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_18996_4	chr11	-	2091	13	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	7	2793	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	58.7572099594784	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGATTGTATATTGCT	NA	False	NA	NA	False	NA	NA	NA	33463739	33419622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_33420126_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_189960_9	chr9	+	3752	6	NIC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	34	7	intron_retention	FALSE	canonical	3	777	junction_1	60.6630035524124	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGACTTTTTTTTTTGG	NA	False	NA	20	True	ATTAAA	-20	NA	14411976	14421668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14419266_14421495
Isoform_189962_281	chr9	+	2562	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	39	685	-9	-685	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTCCGTTGTTCATT	NA	False	NA	14	True	NA	NA	NA	14695988	14745257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_189963_50	chr9	+	3244	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	39	3	-9	-3	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATAAATAATCTCATTC	NA	False	NA	6	True	AATAAA	-24	NA	14695988	14745939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_189966_15	chr9	+	2523	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	15	748	-7	-748	multi-exon	TRUE	canonical	3	154	junction_1	46.9081733954962	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTTTCTGCTTG	NA	False	NA	4	True	GGGGCT	-34	NA	14695964	14745194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_189967_11	chr9	+	2851	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	16	419	-6	-419	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGGCTGTTTTGGTT	NA	False	NA	NA	False	TTTAAA	-27	NA	14695965	14745523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_189968_39	chr9	+	5718	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	39	-2471	-9	-6	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTTGAACGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	14695988	14748413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_189969_10	chr9	+	2460	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-3	-683	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	78.7000282366178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCCGTTGTTCATTTC	NA	False	NA	16	True	NA	NA	NA	14695994	14745259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_14696054_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_18997_5	chr11	-	1242	2	NNC	ENSMUSG00000042549.11	novel	1291	2	NA	NA	-3	-48	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	60822696	60811790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_60812728_60822391
Isoform_189970_197	chr9	+	2560	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	43	-685	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTCCGTTGTTCATT	NA	False	NA	14	True	NA	NA	NA	14696040	14745257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_189972_38	chr9	+	2594	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	9	-685	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTCCGTTGTTCATT	NA	False	NA	14	True	NA	NA	NA	14696006	14745257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_189976_25	chr9	+	5718	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	44	-3	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTTTGAACGTTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	14696041	14748416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_189977_16	chr9	+	3307	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATAATCTCATTCCCT	NA	False	NA	9	True	AATAAA	-27	NA	14695978	14745942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_18998_6	chr11	-	2359	2	Genic_Genomic	ENSMUSG00000082454.4	novel	1848	1	NA	NA	-4555	272	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTCCCTGTGTCTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	48649096	48642421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_48644674_48648989
Isoform_189985_19	chr9	+	1986	4	FSM	ENSMUSG00000031937.8	ENSMUST00000034413.8	1991	4	8	-3	8	3	multi-exon	FALSE	canonical	3	5	junction_3	3.68178700572909	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAGTTTGTTTTTCAGT	NA	False	NA	NA	False	ATTAAA	-4	NA	15150348	15170715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_15150655_15168525_15168853_15168946_15169088_15169503
Isoform_189988_24	chr9	+	1431	7	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	-1	1	intron_retention	FALSE	canonical	3	69	junction_1	217.881275010038	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9121	False	NA	6	True	AATAAA	-17	NA	15217558	15223401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
Isoform_18999_5	chr11	-	553	3	Intergenic	novelGene_1607	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGGGAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	AATAAA	-13	NA	60997033	60982748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_60983104_60989850_60989955_60996939
Isoform_189990_6	chr9	+	1311	8	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	238.474231697417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9119	False	NA	6	True	AATAAA	-17	NA	15217556	15223401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223113
Isoform_189991_11	chr9	+	1217	8	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	233.748163803767	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	9121	False	NA	5	True	AATAAA	-16	NA	15217558	15223400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
Isoform_189992_21	chr9	+	1334	13	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	171.959055204042	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACCTTTTATAGTTT	9119	False	NA	0	True	NA	NA	NA	15217556	15228267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
Isoform_189997_35	chr9	+	1346	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-34	-307	16	1	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9088	False	NA	6	True	AATAAA	-17	NA	15217525	15223401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
Isoform_190000_19	chr9	+	1102	7	FSM	ENSMUSG00000031939.17	ENSMUST00000034415.6	1148	7	47	-1	1	1	multi-exon	FALSE	canonical	3	55	junction_6	190.157317912184	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9119	False	NA	6	True	AATAAA	-17	NA	15217556	15223401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
Isoform_190002_76	chr9	+	1214	12	FSM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	3	-1	-1	1	multi-exon	FALSE	canonical	3	217	junction_9	145.029663537447	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACCTTTTATAGTTT	9121	False	NA	0	True	NA	NA	NA	15217558	15228267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
Isoform_190027_10	chr9	+	883	3	FSM	ENSMUSG00000058173.13	ENSMUST00000215907.2	994	3	110	1	110	-1	multi-exon	FALSE	canonical	2	6	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTGGGTGTTTCTCTTG	NA	False	NA	7	True	AATAAA	-15	NA	15404837	15456552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_15404926_15436923_15437001_15455834
Isoform_190028_6	chr9	+	5539	11	FSM	ENSMUSG00000043885.15	ENSMUST00000061568.9	6539	11	20	980	20	-980	multi-exon	FALSE	canonical	2	6	junction_1	2.41039415863879	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAATGCCTATTAAGTT	NA	False	NA	NA	False	AATAAA	-20	NA	15621054	15653677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
Isoform_19003_4	chr11	-	440	3	NNC	ENSMUSG00000020617.14	novel	2035	6	NA	NA	-37	-13694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACGTGTCTTACACGGT	NA	False	NA	NA	False	AATAAA	-11	NA	109704937	109696117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_109696270_109704384_109704573_109704837
Isoform_190034_301	chr9	+	2200	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	147	3442	-28	1987	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8512	False	NA	11	True	NA	NA	NA	18203567	18225296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_190035_658	chr9	+	2174	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	173	3442	-2	1987	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8538	False	NA	11	True	NA	NA	NA	18203593	18225296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_190036_23	chr9	+	2262	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	85	3442	85	1987	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8450	False	NA	11	True	NA	NA	NA	18203505	18225296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_190038_17	chr9	+	2377	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	-29	3441	-29	1988	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8336	False	NA	12	True	NA	NA	NA	18203391	18225297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_19004_3	chr11	-	1975	17	NNC	ENSMUSG00000020546.15	novel	1782	16	NA	NA	-5	-8514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.33014170118931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAATGGCCTCCTTTTGC	NA	False	NA	NA	False	AATAAA	-42	NA	90528915	90391448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_90391715_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
Isoform_190043_125	chr9	+	3941	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	173	1675	-2	-1675	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTGAGTCCTGAGAG	8538	False	NA	NA	False	ATTAAA	-12	NA	18203593	18227063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_190044_61	chr9	+	3966	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	148	1675	-27	-1675	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTGAGTCCTGAGAG	8513	False	NA	NA	False	ATTAAA	-12	NA	18203568	18227063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_190045_22	chr9	+	5617	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	173	-1	-2	1	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTAAGAGTCTGTGGT	8538	False	NA	NA	False	ATTAAA	-23	NA	18203593	18228739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_19005_3	chr11	-	178	2	Antisense	novelGene_ENSMUSG00000064692.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACATACATAAA	NA	False	NA	NA	False	NA	NA	NA	62804143	62610683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_62610782_62804063
Isoform_190056_15	chr9	+	5180	9	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-2	1988	intron_retention	FALSE	canonical	3	795	junction_1	63.7411758598788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8538	False	NA	12	True	NA	NA	NA	18203593	18225297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_190058_8	chr9	+	4228	11	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	-1	combination_of_known_splicesites	TRUE	canonical	2	3	junction_2	83.9083428509943	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533387	19561026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_19533582_19535527_19535595_19536795_19536934_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
Isoform_190061_20	chr9	+	4041	9	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	77.4721724233934	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533381	19561026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_19533582_19535527_19535595_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
Isoform_190066_170	chr9	+	4030	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	-42	0	-16	0	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533381	19561027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
Isoform_190070_4	chr9	+	3950	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	74.5949607095902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTTGTTTCCCTGTTT	NA	False	NA	23	True	AATAAA	-26	NA	19533387	19561036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19557997
Isoform_190072_24	chr9	+	4017	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	11	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	65.5076331430162	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCCCTGTTTGC	NA	False	NA	25	True	AATAAA	-28	NA	19533381	19561038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
Isoform_190074_109	chr9	+	3969	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533387	19561027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
Isoform_19008_8	chr11	+	3678	19	NIC	ENSMUSG00000020454.18	novel	3565	18	NA	NA	-36	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_1	76.7602488431945	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3537	False	NA	12	True	ATTAAA	-28	NA	3152355	3194586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3152557_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190081_17	chr9	+	2571	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	187	10216	-13	-1	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTGAGTTTCATGATA	29	False	NA	24	True	ATTAAA	-24	NA	20492807	20506489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
Isoform_190082_9	chr9	+	2646	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	106	10222	-94	-7	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACAGCAGCTGAGTTTC	NA	False	NA	18	True	ATTAAA	-18	NA	20492726	20506483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
Isoform_190084_4	chr9	+	2770	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	-17	10221	17	-6	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAGCAGCTGAGTTTCA	NA	False	NA	19	True	ATTAAA	-19	NA	20492603	20506484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
Isoform_190086_10	chr9	+	456	5	FSM	ENSMUSG00000084786.10	ENSMUST00000161486.8	794	5	-12	350	1	13	multi-exon	FALSE	canonical	3	14	junction_3	472.738828530088	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTGAGAGTTGTGT	NA	False	NA	31	True	AATAAA	-28	NA	20556117	20558086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556897_20556956_20557911
Isoform_190089_566	chr9	+	455	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	1485	174	-18	13	multi-exon	FALSE	canonical	3	1046	junction_4	63.2114507031756	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTGAGAGTTGTGT	NA	False	NA	31	True	AATAAA	-28	NA	20556098	20558086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
Isoform_19009_7	chr11	+	3604	18	FSM	ENSMUSG00000020454.18	ENSMUST00000020734.11	3565	18	-33	-6	-33	0	multi-exon	FALSE	canonical	3	10	junction_1	69.1571601699214	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGTACTGTGTTTAT	3540	False	NA	13	True	ATTAAA	-29	NA	3152358	3194587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3152557_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190090_7	chr9	+	554	5	FSM	ENSMUSG00000084786.10	ENSMUST00000161882.8	489	5	-57	-8	-10	0	multi-exon	FALSE	canonical	2	15	junction_4	473.611127403063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556106	20558073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556990_20557825
Isoform_190091_11	chr9	+	595	4	FSM	ENSMUSG00000084786.10	ENSMUST00000154429.9	2511	4	1931	-15	-12	13	multi-exon	FALSE	canonical	3	1046	junction_3	4.78423336480244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTGAGAGTTGTGT	NA	False	NA	31	True	AATAAA	-28	NA	20556104	20558086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20556190_20556488_20556786_20556917_20556956_20557911
Isoform_190096_3168	chr9	+	946	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	4	2893	4	-2893	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	3168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGGTCCTGTATCATT	NA	False	NA	24	True	ATTAAA	-14	NA	20563394	20574987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
Isoform_190098_101	chr9	+	977	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	-28	2894	-28	-2894	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGGTCCTGTATCAT	NA	False	NA	23	True	ATTAAA	-13	NA	20563362	20574986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
Isoform_19010_10	chr11	+	1731	10	ISM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	27	14401	1	1	5prime_fragment	FALSE	canonical	3	104	junction_1	44.0756924695082	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGCAATTTGGAAATT	3871	False	NA	NA	False	AATAAA	-18	NA	3152689	3180187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868
Isoform_190106_3	chr9	+	3114	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	8	-118	intron_retention	FALSE	canonical	3	7	junction_3	41.2812171439856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTGTGCAAAGCTTTT	NA	False	NA	-99	True	AATAAA	-15	NA	20779961	20785485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20781057_20782532_20782671_20782822_20784163_20784561_20784837
Isoform_190107_41	chr9	+	1673	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	11	-1	-5	1	multi-exon	TRUE	canonical	3	59	junction_6	22.3469853694417	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATAGCCTTAATTCCC	NA	False	NA	20	True	AATAAA	-29	NA	20779948	20785604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
Isoform_19011_76	chr11	+	3592	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	20	2	-6	0	multi-exon	FALSE	canonical	3	81	junction_10	64.4808326386825	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3864	False	NA	12	True	ATTAAA	-28	NA	3152682	3194586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190113_9	chr9	+	1786	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	8	-11	intron_retention	FALSE	canonical	3	88	junction_5	14.0118997046558	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTCTTCAGAGTAATA	NA	False	NA	8	True	AATAAA	-17	NA	20779961	20785592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784561_20784837
Isoform_190118_5	chr9	+	3210	7	FSM	ENSMUSG00000038884.15	ENSMUST00000175820.8	3210	7	-4	4	-4	-4	multi-exon	FALSE	canonical	3	59	junction_5	23.9704679414761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAGTAATAGCCTTAA	NA	False	NA	15	True	AATAAA	-24	NA	20779949	20785599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
Isoform_19012_12	chr11	+	3666	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	-55	3	-55	0	multi-exon	FALSE	canonical	3	81	junction_10	64.4808326386825	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3789	False	NA	11	True	ATTAAA	-27	NA	3152607	3194585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190120_18	chr9	+	3327	6	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	9	-12	intron_retention	FALSE	canonical	3	88	junction_4	15.3414471286121	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTCTTCAGAGTAAT	NA	False	NA	7	True	AATAAA	-16	NA	20779962	20785591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784561_20784837
Isoform_190125_671	chr9	+	1575	11	FSM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	94	1	2	-1	multi-exon	FALSE	canonical	3	766	junction_9	65.2172523186925	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799564	20803473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
Isoform_190126_89	chr9	+	1607	11	FSM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	62	1	-13	-1	multi-exon	FALSE	canonical	3	766	junction_9	65.2172523186925	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799532	20803473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
Isoform_190128_41	chr9	+	1655	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	766	junction_8	67.5113159239085	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799564	20803473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
Isoform_19013_129	chr11	+	3510	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	53.324624433129	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3874	False	NA	12	True	ATTAAA	-28	NA	3152692	3194586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190136_12	chr9	+	1665	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	766	junction_8	68.2725113238786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799564	20803474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
Isoform_190138_9	chr9	+	1396	8	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	1317	0	-1146	0	3prime_fragment	FALSE	canonical	3	766	junction_6	72.4996833209129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20800787	20803474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
Isoform_190144_18	chr9	+	2364	5	FSM	ENSMUSG00000003299.11	ENSMUST00000213977.2	2317	5	-50	3	-9	-3	multi-exon	FALSE	canonical	3	966	junction_4	55.0244263941025	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTGAAAATGAGCTGGT	NA	False	NA	15	True	AATAAA	-15	NA	20914201	20920124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122
Isoform_19015_15	chr11	+	3597	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	53.324624433129	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3789	False	NA	14	True	ATTAAA	-30	NA	3152607	3194588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190153_1465	chr9	+	1113	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	164	11	-13	-3	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTGAAAATGAGCTGGT	NA	False	NA	15	True	AATAAA	-15	NA	20914197	20920124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
Isoform_190154_29	chr9	+	1266	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	14	8	14	0	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914047	20920127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
Isoform_190158_31	chr9	+	1191	8	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	832	junction_5	84.7158515875517	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTGAAAATGAGCTGGT	NA	False	NA	15	True	AATAAA	-15	NA	20914201	20920124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919196_20919789
Isoform_19017_5	chr11	+	1890	10	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	50.9373859159519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAGCAATTTGGAAA	3905	False	NA	NA	False	AATAAA	-16	NA	3152723	3180185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868
Isoform_190171_1536	chr9	+	2532	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	0	3	0	-3	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGTGAGTTTGTGTA	NA	False	NA	13	True	AATAAA	-18	NA	20927280	20940110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
Isoform_190172_17	chr9	+	3403	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	-874	6	-874	-6	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTGTGAGTTTGT	NA	False	NA	10	True	AATAAA	-15	NA	20926406	20940107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
Isoform_190190_15	chr9	+	3947	15	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-34	-426	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	5.62429133857986	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGGAGACAGTGAACTT	1130	False	NA	5	True	TATAAA	-15	NA	21092877	21124118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
Isoform_190191_12	chr9	+	4342	15	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	5.62429133857986	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTGTTTCCTGGGAT	1160	False	NA	5	True	NA	NA	NA	21092907	21124543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
Isoform_190193_5	chr9	+	1608	4	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8054	-2	8054	2	3prime_fragment	FALSE	canonical	3	21	junction_2	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAAACACATCAGCTGT	NA	False	NA	NA	False	NA	NA	NA	21116054	21122925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_21116421_21116586_21116710_21117440_21117624_21121989
Isoform_190198_18	chr9	+	2329	8	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	17	4026	4	1	intron_retention	FALSE	canonical	3	466	junction_7	31.0273085773004	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGGCGTTGTTGAC	8651	False	NA	22	True	GATAAA	-14	NA	21176605	21185042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931
Isoform_190199_15	chr9	+	2257	9	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	16	4021	3	6	intron_retention	FALSE	canonical	3	441	junction_8	36.9492895736846	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCGTTGTTGACATTTC	8650	False	NA	27	True	GATAAA	-19	NA	21176604	21185047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086
Isoform_1902_6	chr10	-	2713	4	FSM	ENSMUSG00000087177.8	ENSMUST00000149830.8	660	4	130	-2183	-27	1615	multi-exon	FALSE	canonical	1	1	junction_2	9.56846672960488	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTGGAGCATGTGTCC	5788	False	NA	NA	False	NA	NA	NA	39607872	39528277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_39530685_39531835_39531926_39557468_39557546_39607733
Isoform_190200_1105	chr9	+	1915	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	16	4020	3	7	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCGTTGTTGACATTTCA	8650	False	NA	28	True	GATAAA	-20	NA	21176604	21185048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
Isoform_190202_22	chr9	+	2501	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	16	3434	3	593	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGACTGGCCTTAAACT	8650	False	NA	NA	False	NA	NA	NA	21176604	21185634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
Isoform_190203_23	chr9	+	1960	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	-35	4026	-35	1	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGGCGTTGTTGAC	8599	False	NA	22	True	GATAAA	-14	NA	21176553	21185042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
Isoform_19021_60	chr11	+	3780	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	67.055647611094	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3871	False	NA	12	True	ATTAAA	-28	NA	3152689	3194586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190210_24	chr9	+	1996	9	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	-3	4	intron_retention	FALSE	canonical	3	466	junction_7	31.6462379280697	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTTGTTGACATT	8644	False	NA	25	True	GATAAA	-17	NA	21176598	21185045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184207_21184549
Isoform_190218_133	chr9	+	3417	22	FSM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	61	0	11	0	multi-exon	FALSE	canonical	3	79	junction_1	41.7821257447013	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6641	False	NA	19	True	AATAAA	-19	NA	21232054	21266324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
Isoform_190219_49	chr9	+	4130	22	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	-12	0	intron_retention	FALSE	canonical	3	72	junction_21	46.6520385236562	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6609	False	NA	19	True	AATAAA	-19	NA	21232022	21266324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
Isoform_19022_5	chr11	+	3848	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-44	2	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	67.055647611094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATATGGCTGGTACTGTGT	3800	False	NA	9	True	ATTAAA	-25	NA	3152618	3194583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190221_34	chr9	+	3574	23	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_22	56.9185477184737	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6656	False	NA	19	True	AATAAA	-19	NA	21232069	21266324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
Isoform_190224_246	chr9	+	3447	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	12	-3	12	0	multi-exon	FALSE	canonical	3	114	junction_21	32.3776608971381	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5748	False	NA	19	True	AATAAA	-19	NA	21249135	21266324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
Isoform_190225_31	chr9	+	4126	22	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	12	1	intron_retention	FALSE	canonical	3	72	junction_21	38.6895897334347	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACCTGGTATGCTTAA	5748	False	NA	17	True	AATAAA	-17	NA	21249135	21266322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
Isoform_190227_14	chr9	+	3570	23	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_22	56.4293605073877	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5753	False	NA	19	True	AATAAA	-19	NA	21249140	21266324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264425_21264977
Isoform_190228_36	chr9	+	3587	23	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_22	51.5317642553865	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5779	False	NA	18	True	AATAAA	-18	NA	21249166	21266323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
Isoform_190230_13	chr9	+	3513	21	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	42	0	intron_retention	FALSE	canonical	3	114	junction_20	32.821639203428	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5778	False	NA	18	True	AATAAA	-18	NA	21249165	21266323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
Isoform_19024_67	chr11	+	3704	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	56.8118974819688	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3875	False	NA	12	True	ATTAAA	-28	NA	3152693	3194586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190244_108	chr9	+	3696	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	-9	-3	0	3	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCCGTACTTGAGTCTT	NA	False	NA	26	True	AATACA	-15	NA	21279241	21313093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
Isoform_190246_27	chr9	+	3786	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	-99	-3	-15	3	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCCGTACTTGAGTCTT	NA	False	NA	26	True	AATACA	-15	NA	21279151	21313093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
Isoform_190247_198	chr9	+	3507	21	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-4	-18	combination_of_known_junctions	FALSE	canonical	3	965	junction_19	396.045376188133	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAAAAACAAAAGA	NA	False	NA	97	True	NA	NA	NA	21279229	21316638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_190248_36	chr9	+	3469	21	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	26	-54	combination_of_known_junctions	FALSE	canonical	3	965	junction_19	396.045376188133	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACAGTGGTTTTTTTTT	NA	False	NA	22	True	NA	NA	NA	21279192	21316563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_190249_26	chr9	+	3598	21	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-29	-19	combination_of_known_junctions	FALSE	canonical	3	965	junction_19	396.045376188133	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279137	21316637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_190256_13	chr9	+	3471	20	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	529.673719668514	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAAAAACAAAAGA	NA	False	NA	97	True	NA	NA	NA	21279241	21316638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21279396_21298995_21299094_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_19026_7	chr11	+	3793	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	56.8118974819688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGTACTGTGTTTAT	3787	False	NA	13	True	ATTAAA	-29	NA	3152605	3194587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_190262_122	chr9	+	3707	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	-107	6	25	3	multi-exon	FALSE	canonical	3	922	junction_17	371.198684895057	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCCGTACTTGAGTCTT	NA	False	NA	26	True	AATACA	-15	NA	21279191	21313093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
Isoform_190265_171	chr9	+	3466	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	65	18	-2	-18	multi-exon	FALSE	canonical	3	965	junction_18	395.630525194118	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAAAAACAAAAGA	NA	False	NA	97	True	NA	NA	NA	21279231	21316638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_190266_59	chr9	+	3550	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	2	-3	2	2	multi-exon	FALSE	canonical	3	965	junction_18	395.630525194118	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279168	21316659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_1903_27	chr10	-	3521	4	FSM	ENSMUSG00000096687.9	ENSMUST00000178563.3	3528	4	3	4	3	-4	multi-exon	FALSE	canonical	2	5	junction_3	4.98887651569859	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGTTGACTGCTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	39775231	39766012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_39768926_39770011_39770129_39770767_39770937_39774909
Isoform_190302_12	chr9	+	1157	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	249.047568464389	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTCTTGTGTCTGTCTT	2378	False	NA	44	True	TATAAA	-30	NA	21323141	21331572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21323242_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
Isoform_190306_541	chr9	+	1320	10	FSM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	-2	-2	-2	2	multi-exon	FALSE	canonical	3	687	junction_5	65.5845510263914	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTCTTGTGTCTGTCTT	2367	False	NA	44	True	TATAAA	-30	NA	21323130	21331572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
Isoform_190310_17	chr9	+	1303	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	2	intron_retention	FALSE	canonical	3	47	junction_9	245.76431548423	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTCTTGTGTCTGTCTT	2378	False	NA	44	True	TATAAA	-30	NA	21323141	21331572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331337
Isoform_190311_12	chr9	+	1398	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-2	4	intron_retention	FALSE	canonical	3	687	junction_5	69.0261499360931	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGTGTCTGTCTTCT	2367	False	NA	46	True	TATAAA	-32	NA	21323130	21331574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21331009_21331331
Isoform_190313_16	chr9	+	1320	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	2	4	intron_retention	FALSE	canonical	3	37	junction_5	251.720205244623	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGTGTCTGTCTTCT	2379	False	NA	46	True	TATAAA	-32	NA	21323142	21331574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328694_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
Isoform_190325_424	chr9	+	3509	21	FSM	ENSMUSG00000033335.18	ENSMUST00000072362.14	3502	21	-5	-2	-5	2	multi-exon	FALSE	canonical	2	327	junction_20	112.703715555433	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGGGCCTTTTGTGT	5874	False	NA	22	True	AATAAA	-32	NA	21336235	21418438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
Isoform_190328_214	chr9	+	3497	21	FSM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	17	-4	4	2	multi-exon	FALSE	canonical	2	185	junction_20	132.122244531343	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGGGCCTTTTGTGT	5883	False	NA	22	True	AATAAA	-32	NA	21336244	21418438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
Isoform_190331_253	chr9	+	3033	21	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	2	156	junction_20	136.611712528612	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTGCAGATGTGTCT	5873	False	NA	16	True	AATAAA	-17	NA	21336234	21419051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
Isoform_190334_503	chr9	+	3471	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	224	junction_13	132.11218266634	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5898	False	NA	20	True	AATAAA	-30	NA	21336259	21418436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
Isoform_190335_214	chr9	+	3507	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	2	224	junction_13	132.11218266634	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5862	False	NA	20	True	AATAAA	-30	NA	21336223	21418436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
Isoform_190339_363	chr9	+	3469	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	185	junction_19	149.780670673753	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5897	False	NA	20	True	AATAAA	-30	NA	21336258	21418436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
Isoform_190340_257	chr9	+	3020	20	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	2	156	junction_19	153.943760641486	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTGCAGATGTGTCT	5874	False	NA	16	True	AATAAA	-17	NA	21336235	21419051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
Isoform_19035_205	chr11	+	2655	3	FSM	ENSMUSG00000020453.18	ENSMUST00000094471.10	2930	3	275	0	-171	0	multi-exon	FALSE	canonical	3	69	junction_2	176	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	6281	False	NA	NA	False	GATAAA	-17	NA	3240267	3245429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3241885_3243279_3243344_3244455
Isoform_190361_43	chr9	+	3618	14	FSM	ENSMUSG00000032185.16	ENSMUST00000154049.8	3585	14	-33	0	-4	0	multi-exon	FALSE	canonical	3	1025	junction_5	70.328224573052	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458185	21500763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803
Isoform_190367_95	chr9	+	3317	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115394.8	3320	15	-4	7	-4	-7	multi-exon	FALSE	canonical	3	1025	junction_5	69.6438461468237	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458214	21500756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146
Isoform_190369_2121	chr9	+	3207	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	7	6	7	-6	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGCCTGCAAAACAGC	NA	False	NA	14	True	AATAAA	-16	NA	21458196	21500757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
Isoform_190375_252	chr9	+	3288	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	-75	7	-75	-7	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458114	21500756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
Isoform_190381_128	chr9	+	3128	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115395.10	3152	15	-3	27	-3	-7	multi-exon	FALSE	canonical	3	70	junction_14	283.604972827073	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458205	21500756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499344
Isoform_1904_8	chr10	-	2514	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	-55	2938	-51	829	multi-exon	FALSE	canonical	3	11	junction_2	3.87814388593306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATATCCTGGCAATT	7088	False	NA	NA	False	AATAAA	-16	NA	40018305	39912465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
Isoform_190407_401	chr9	+	2932	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	215	23	215	-23	multi-exon	FALSE	canonical	3	163	junction_1	0	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAGTCTTATTCACCC	4726	False	NA	11	True	ATTAAA	-20	NA	21504232	21507243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21504367_21504445
Isoform_190423_125	chr9	+	5457	34	FSM	ENSMUSG00000032187.17	ENSMUST00000098948.10	6376	34	56	863	-39	1	multi-exon	FALSE	non_canonical	0	0	junction_28	138.291543357457	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1293	False	NA	23	True	AATAAA	-20	NA	21527520	21614663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_190424_195	chr9	+	5430	34	FSM	ENSMUSG00000032187.17	ENSMUST00000098948.10	6376	34	83	863	-12	1	multi-exon	FALSE	non_canonical	0	0	junction_28	138.291543357457	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1320	False	NA	23	True	AATAAA	-20	NA	21527547	21614663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_190429_67	chr9	+	5408	34	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	7	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_28	156.387829934745	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1339	False	NA	23	True	AATAAA	-20	NA	21527566	21614663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_190430_38	chr9	+	5454	34	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-39	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_28	156.387829934745	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1293	False	NA	23	True	AATAAA	-20	NA	21527520	21614663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_190431_316	chr9	+	5416	34	FSM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	87	851	-8	0	multi-exon	FALSE	canonical	3	423	junction_28	87.1904283674422	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1324	False	NA	22	True	AATAAA	-19	NA	21527551	21614662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_190432_121	chr9	+	5450	34	FSM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	54	850	-41	1	multi-exon	FALSE	canonical	3	423	junction_28	87.1904283674422	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1291	False	NA	23	True	AATAAA	-20	NA	21527518	21614663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_190434_37	chr9	+	5513	34	FSM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	-9	850	-9	1	multi-exon	FALSE	canonical	3	423	junction_28	87.1904283674422	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1228	False	NA	23	True	AATAAA	-20	NA	21527455	21614663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_190435_173	chr9	+	5410	34	FSM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	-4	-1	-4	1	multi-exon	FALSE	canonical	3	225	junction_29	114.960846930185	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1328	False	NA	23	True	AATAAA	-20	NA	21527555	21614663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_19046_99	chr11	+	3362	5	FSM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	-190	1	-172	-1	multi-exon	FALSE	canonical	0	0	junction_4	189.564467925822	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCCTGCTCCCCCGA	6280	False	NA	13	True	ATTAAA	-15	NA	3240266	3259082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
Isoform_1905_17	chr10	-	5393	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	2	2	2	-2	multi-exon	FALSE	canonical	3	11	junction_2	3.87814388593306	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTGTGATTGTGTTT	7145	False	NA	NA	False	AATAAA	-20	NA	40018248	39909529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
Isoform_190514_567	chr9	+	4479	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	146	2	-3	2	multi-exon	FALSE	canonical	3	262	junction_7	34.4140270749526	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTCATCCTTATGTG	1919	False	NA	14	True	ATTAAA	-13	NA	21634924	21661213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
Isoform_190542_17	chr9	+	2623	10	NIC	ENSMUSG00000040563.14	novel	2626	10	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	8.37692303332034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCCTTCTGCCTGCC	86	False	NA	NA	False	AATAAA	-18	NA	21848317	21860202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858349_21858676_21858729_21858899
Isoform_190543_18	chr9	+	2643	10	FSM	ENSMUSG00000040563.14	ENSMUST00000046371.13	2626	10	-15	-2	-15	-1	multi-exon	TRUE	canonical	3	9	junction_8	8.89999306422257	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCCTTCTGCCTGCC	82	False	NA	NA	False	AATAAA	-18	NA	21848313	21860202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
Isoform_190545_173	chr9	+	1807	3	NNC	ENSMUSG00000051238.7	novel	1838	2	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36	173	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGACTCTGGTGGTCTGTG	NA	False	NA	10	True	NA	NA	NA	21867060	21869562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_21867301_21867972_21869149_21869171
Isoform_190546_736	chr9	+	2011	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	1	0	1	0	multi-exon	FALSE	canonical	3	461	junction_11	125.012497645132	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914314	21925518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_190548_42	chr9	+	2221	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	-208	-1	4	1	multi-exon	FALSE	canonical	3	461	junction_11	125.012497645132	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTGTTTTTTAATT	NA	False	NA	21	True	AATAAA	-17	NA	21914105	21925519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_190550_482	chr9	+	2032	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	-47	-2	1	0	multi-exon	FALSE	canonical	3	290	junction_11	154.653737577573	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914314	21925518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_190552_25	chr9	+	2241	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	-256	-2	4	0	multi-exon	TRUE	canonical	3	290	junction_11	154.653737577573	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914105	21925518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_190554_129	chr9	+	2011	18	FSM	ENSMUSG00000003402.15	ENSMUST00000216344.2	2228	18	217	0	5	0	multi-exon	FALSE	canonical	3	150	junction_1	191.361611709314	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914318	21925518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_190556_72	chr9	+	2037	18	NIC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	210.71322284977	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914313	21925518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_190572_4	chr9	+	1368	2	ISM	ENSMUSG00000096981.3	ENSMUST00000180419.2	1415	3	5136	-4	5136	4	3prime_fragment	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATCTATGTGAAATGG	NA	False	NA	8	True	AATAAA	-16	NA	21987463	21997422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_21987648_21996238
Isoform_190573_512	chr9	+	672	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	1	22	1	11	multi-exon	FALSE	canonical	3	566	junction_1	0	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCAGCCTTCATCCAAAG	NA	False	NA	22	True	AATAAA	-22	NA	22068142	22069632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_22068210_22069027
Isoform_190576_63	chr9	+	737	2	FSM	ENSMUSG00000010607.9	ENSMUST00000148088.2	676	2	-37	-24	-37	-9	multi-exon	FALSE	canonical	3	126	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGACTGTTTCTTCTA	NA	False	NA	35	True	AATAAA	-35	NA	22068204	22069645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_22068324_22069027
Isoform_190577_23	chr9	+	936	2	FSM	ENSMUSG00000057982.9	ENSMUST00000213350.2	597	2	0	-339	0	339	multi-exon	FALSE	canonical	3	166	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	749	False	NA	NA	False	NA	NA	NA	22137018	22147141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_22137129_22146315
Isoform_190581_19	chr9	+	3166	5	FSM	ENSMUSG00000057982.9	ENSMUST00000213371.2	1766	5	20	-1420	-9	1018	multi-exon	FALSE	canonical	3	33	junction_2	49.3273504254992	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTTTATTGATAG	769	False	NA	NA	False	NA	NA	NA	22137038	22152409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_22137129_22146315_22146443_22147323_22147591_22148970_22149081_22149837
Isoform_190590_72	chr9	+	5231	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-9	-3909	-9	-2	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTGGTTGTGTTT	769	False	NA	12	True	NA	NA	NA	22137038	22154648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
Isoform_190592_6	chr9	+	1127	2	ISM	ENSMUSG00000036411.11	ENSMUST00000058868.9	2223	7	13	19666	13	-10090	5prime_fragment	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTCTCTGACTAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	22322821	22336311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_22323046_22335408
Isoform_190593_8	chr9	+	2206	7	FSM	ENSMUSG00000036411.11	ENSMUST00000058868.9	2223	7	19	-2	-16	2	multi-exon	FALSE	canonical	2	6	junction_3	3.62476052848859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCAGTTCTTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	22322827	22355979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_22323046_22335408_22336104_22341651_22341796_22342971_22343105_22346390_22346697_22351162_22351261_22355367
Isoform_190594_18	chr9	+	3419	23	FSM	ENSMUSG00000035919.17	ENSMUST00000150395.8	3425	23	7	-1	-2	1	multi-exon	FALSE	canonical	3	14	junction_1	19.2294217582595	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAACTGGACTGAATT	NA	False	NA	-2	True	AATAAA	-15	NA	22387024	22799571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
Isoform_190597_43	chr9	+	3350	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	27	5	11	1	multi-exon	FALSE	canonical	3	30	junction_1	13.43515542748	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAACTGGACTGAATT	NA	False	NA	-2	True	AATAAA	-15	NA	22387037	22799571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
Isoform_190598_26	chr9	+	3563	23	NIC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-2	1	intron_retention	FALSE	canonical	3	12	junction_1	19.496609156339	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAACTGGACTGAATT	NA	False	NA	-2	True	AATAAA	-15	NA	22387015	22799571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_22387487_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
Isoform_190600_30	chr9	+	3495	22	FSM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	1	-1	1	1	multi-exon	FALSE	canonical	3	19	junction_1	15.2048745018425	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAACTGGACTGAATT	NA	False	NA	-2	True	AATAAA	-15	NA	22387027	22799571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
Isoform_19061_342	chr11	+	3291	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-172	-1	-172	1	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTGCTCCCCCGAGT	6280	False	NA	15	True	ATTAAA	-17	NA	3240266	3259084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
Isoform_190613_1012	chr9	+	2314	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	1012	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTGTCTTGTATAT	NA	False	NA	19	True	AATAAA	-19	NA	25163945	25219864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
Isoform_190614_390	chr9	+	2453	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGTGCAGTGTCTTGT	NA	False	NA	15	True	AATAAA	-15	NA	25163802	25219860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
Isoform_190615_191	chr9	+	2496	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGTGTCTTGTATATT	NA	False	NA	20	True	AATAAA	-20	NA	25163764	25219865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
Isoform_190627_42	chr9	+	2713	8	FSM	ENSMUSG00000036611.6	ENSMUST00000040677.6	2723	8	10	0	10	0	multi-exon	FALSE	canonical	3	10	junction_4	5.11101251999952	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGGAATGGTTT	NA	False	NA	15	True	AATAAA	-23	NA	25392852	25515406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_25393193_25393576_25394616_25458847_25458900_25493187_25493299_25497957_25498093_25500730_25500870_25505856_25506052_25514704
Isoform_190629_7	chr9	+	945	8	NIC	ENSMUSG00000035443.11	novel	918	8	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	221.643121863476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26910975	26918629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
Isoform_190630_11	chr9	+	764	7	NIC	ENSMUSG00000035443.11	novel	775	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	210.647744403357	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26911005	26918629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852_26916946_26917647_26917744_26918453
Isoform_190631_7	chr9	+	790	5	ISM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	0	1397	0	2	5prime_fragment	FALSE	canonical	3	529	junction_1	46.8634985889871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATCATTGAGTTTTAGA	NA	False	NA	5	True	AATAAA	-19	NA	26911005	26917229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852
Isoform_190633_163	chr9	+	929	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	-12	1	0	0	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26911005	26918629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
Isoform_190634_76	chr9	+	964	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	-48	2	-36	-1	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26910969	26918628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
Isoform_190636_54	chr9	+	808	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	-30	-3	-30	0	multi-exon	FALSE	canonical	3	323	junction_6	112.305634567263	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26910975	26918629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
Isoform_190637_205	chr9	+	778	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	0	-3	0	0	multi-exon	FALSE	canonical	3	323	junction_6	112.305634567263	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26911005	26918629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
Isoform_190640_18	chr9	+	954	6	NIC	ENSMUSG00000035443.11	novel	1107	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	323	junction_5	122.182486470034	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26911014	26918629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
Isoform_190644_420	chr9	+	5068	35	FSM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	81	0	81	0	multi-exon	FALSE	canonical	3	212	junction_3	21.5907395566265	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTAGCATTTATTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	26942025	27006608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
Isoform_190647_13	chr9	+	6720	35	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	-9	combination_of_known_junctions	FALSE	canonical	3	41	junction_24	41.1214338069467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAATATAACCTAGCA	NA	False	NA	NA	False	AATAAA	-6	NA	26942025	27006598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
Isoform_19065_81	chr11	+	3314	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-196	0	-196	0	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6256	False	NA	14	True	ATTAAA	-16	NA	3240242	3259083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
Isoform_190652_4	chr9	+	2839	15	FSM	ENSMUSG00000034275.19	ENSMUST00000115247.8	2857	15	19	-1	19	1	multi-exon	FALSE	canonical	2	4	junction_12	6.52311431818907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCCATTTATCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	27210542	27241432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_27210814_27220699_27220898_27222862_27223010_27228650_27228803_27229104_27229223_27230501_27230644_27230819_27230966_27233468_27233612_27233912_27234054_27234139_27234257_27234504_27234656_27235472_27235585_27238141_27238318_27239775_27240003_27240834
Isoform_190653_3	chr9	+	4302	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	-71	1531	-71	522	multi-exon	TRUE	canonical	3	26	junction_9	7.52927619363243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGTATTTGGTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	30338332	30376491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
Isoform_190655_19	chr9	+	5805	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	-27	-16	-27	9	multi-exon	FALSE	canonical	3	26	junction_9	7.52927619363243	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTTCCAAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	30338376	30378038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
Isoform_190658_4	chr9	+	3495	9	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-66	-13283	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	12.8549601321824	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTACTGATGTCTTTGT	NA	False	NA	NA	False	AATACA	-29	NA	30338337	30362686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30362305
Isoform_190659_3	chr9	+	3562	10	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-65	-13287	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	15.7487996799129	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTCTACTGATGTCT	NA	False	NA	NA	False	AATACA	-25	NA	30338338	30362682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30360387_30360460_30362305
Isoform_19066_27	chr11	+	3654	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-536	0	-90	0	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	5916	False	NA	14	True	ATTAAA	-16	NA	3239902	3259083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
Isoform_190660_50	chr9	+	3648	9	FSM	ENSMUSG00000031994.14	ENSMUST00000068135.13	3631	9	-18	1	-18	-1	multi-exon	FALSE	canonical	3	22	junction_2	5.53257399408268	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGTCTAGTCTGGT	NA	False	NA	NA	False	ACTAAA	-17	NA	30853839	30874151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_30854898_30862561_30862802_30863890_30864027_30864651_30864820_30865762_30866068_30867791_30867976_30870209_30870383_30870497_30870674_30872943
Isoform_190663_11	chr9	+	3742	9	FSM	ENSMUSG00000031994.14	ENSMUST00000068135.13	3631	9	-108	-3	-108	3	multi-exon	TRUE	canonical	3	22	junction_2	5.53257399408268	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTAGTCTGGTTCAT	NA	False	NA	NA	False	ACTAAA	-21	NA	30853749	30874155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_30854898_30862561_30862802_30863890_30864027_30864651_30864820_30865762_30866068_30867791_30867976_30870209_30870383_30870497_30870674_30872943
Isoform_190674_331	chr9	+	3390	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-201	5672	-199	-20	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTATGAAGCCACGA	NA	False	NA	12	True	ATTAAA	-15	NA	30941740	30981509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
Isoform_190688_26	chr9	+	9102	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-247	6	-245	-6	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAAGTCTGCTGTTGTTG	NA	False	NA	77	True	ATTAAA	-22	NA	30941694	30987175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
Isoform_190699_74	chr9	+	3651	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-243	-20	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTATGAAGCCACGA	NA	False	NA	12	True	ATTAAA	-15	NA	30941696	30981509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
Isoform_1907_3	chr10	-	5448	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	-55	4	-51	-4	multi-exon	FALSE	canonical	3	11	junction_2	3.87814388593306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATCTTGTGATTGTGT	7088	False	NA	NA	False	AATAAA	-18	NA	40018305	39909531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
Isoform_19071_26	chr11	+	3888	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-770	0	-324	0	multi-exon	TRUE	canonical	3	276	junction_3	67.6576348652209	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	5682	False	NA	14	True	ATTAAA	-16	NA	3239668	3259083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
Isoform_190714_25	chr9	+	3380	6	FSM	ENSMUSG00000047412.17	ENSMUST00000216649.2	3157	6	-243	20	-243	-20	multi-exon	FALSE	canonical	3	75	junction_3	111.276951791465	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTATGAAGCCACGA	NA	False	NA	12	True	ATTAAA	-15	NA	30941696	30981509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978039_30980040
Isoform_190715_11	chr9	+	3614	6	NIC	ENSMUSG00000047412.17	novel	3157	6	NA	NA	-260	-20	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	133.52992174041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTATGAAGCCACGA	NA	False	NA	12	True	ATTAAA	-15	NA	30941679	30981509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978256_30980040
Isoform_190719_17	chr9	+	1941	7	FSM	ENSMUSG00000042496.19	ENSMUST00000117389.8	1952	7	11	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	4.53688586293873	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGAGCATTCTTGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	31191844	31241914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957
Isoform_190720_11	chr9	+	6866	22	NIC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	7.64460000896398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-15	NA	31191844	31293024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
Isoform_190721_22	chr9	+	4745	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_21	8.75776299624583	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTTTCTTTCTTGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	31191844	31293023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755
Isoform_190723_11	chr9	+	5388	26	FSM	ENSMUSG00000042185.15	ENSMUST00000132329.8	5398	26	8	2	1	-2	multi-exon	FALSE	canonical	2	9	junction_5	14.7460638815923	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31297500	31332627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308089_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
Isoform_190725_74	chr9	+	5189	26	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	9.17387595294377	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31297493	31332627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
Isoform_190726_40	chr9	+	5153	26	FSM	ENSMUSG00000042185.15	ENSMUST00000086167.12	5161	26	6	2	1	-2	multi-exon	FALSE	canonical	3	28	junction_5	11.7439346047226	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31297493	31332627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
Isoform_190728_3	chr9	+	5087	25	NIC	ENSMUSG00000042185.15	novel	5161	26	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	16.5763699785769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGGCCTTTAATCAT	NA	False	NA	5	True	ATTAAA	-13	NA	31297458	31332628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
Isoform_190731_7	chr9	+	5075	8	FSM	ENSMUSG00000032035.17	ENSMUST00000034534.13	5080	8	2	3	2	-3	multi-exon	FALSE	canonical	1	1	junction_6	2.24971653543195	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGGTGGCTCTGGCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	32607319	32669113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_32607762_32639970_32640091_32641350_32641552_32644244_32644323_32645235_32645485_32649394_32649656_32664094_32664214_32665508
Isoform_190736_2108	chr9	+	2957	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	26	10	26	-10	multi-exon	FALSE	canonical	3	518	junction_4	138.528744373691	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGCCTCTTAGGTT	5538	False	NA	-7	True	AATAAA	-8	NA	35122476	35128300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
Isoform_190737_119	chr9	+	2987	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	-4	10	-4	-10	multi-exon	TRUE	canonical	3	518	junction_4	138.528744373691	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGCCTCTTAGGTT	5508	False	NA	-7	True	AATAAA	-8	NA	35122446	35128300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
Isoform_190763_444	chr9	+	1799	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	16	6	16	-6	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATGTTTTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	35179176	35187255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
Isoform_190764_10	chr9	+	1823	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	-8	6	-8	-6	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATGTTTTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	35179152	35187255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
Isoform_190767_16	chr9	+	1874	6	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	16	-5	intron_retention	FALSE	canonical	3	136	junction_5	9.97196068985433	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTTTTTAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	35179176	35187256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35184143_35184763_35184862_35186359
Isoform_190772_9	chr9	+	2317	3	FSM	ENSMUSG00000032103.11	ENSMUST00000121246.2	2016	3	2	-303	2	4	multi-exon	FALSE	canonical	3	99	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTCTTTTTCAAGG	NA	False	NA	16	True	ATTAAA	-16	NA	35470763	35478438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_35470814_35476079_35476494_35476585
Isoform_190773_109	chr9	+	1731	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	29	259	23	4	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTCTTTTTCAAGG	NA	False	NA	16	True	ATTAAA	-16	NA	35470784	35478438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
Isoform_190774_10	chr9	+	1990	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	29	0	23	0	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGACCCTTTAGAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	35470784	35478697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
Isoform_190775_15	chr9	+	1823	3	ISM	ENSMUSG00000032103.11	ENSMUST00000135768.2	2144	4	894	-4	23	4	3prime_fragment	FALSE	canonical	3	88	junction_2	8	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTCTTTTTCAAGG	NA	False	NA	16	True	ATTAAA	-16	NA	35470784	35478438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_35470814_35476079_35477152_35477716
Isoform_190777_11	chr9	+	1767	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	37	215	31	48	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTTTGCCAAAGTGTC	NA	False	NA	60	True	NA	NA	NA	35470792	35478482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
Isoform_190779_4	chr9	+	944	5	NIC	ENSMUSG00000074452.14	novel	1690	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	4.49305018890286	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCCTCATATATTCTGC	NA	False	NA	NA	False	AATAAA	-21	NA	35481579	35557756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_35481827_35485525_35485684_35518890_35519016_35523067_35523168_35557442
Isoform_190780_102	chr9	+	1694	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	97	3	17	1	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTTCATGGTTTTTGG	NA	False	NA	15	True	AATAAA	-15	NA	36744076	36790217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
Isoform_190781_69	chr9	+	1722	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	69	3	-11	1	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTTCATGGTTTTTGG	NA	False	NA	15	True	AATAAA	-15	NA	36744048	36790217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
Isoform_190782_33	chr9	+	1009	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	91	1519	91	-1519	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTTGCTCTTCAAGCC	NA	False	NA	12	True	AATAAA	-18	NA	37119609	37134477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
Isoform_190783_5	chr9	+	1182	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	-41	1478	-41	-1478	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACATTTAGTGTTTGCTT	NA	False	NA	53	True	NA	NA	NA	37119477	37134518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
Isoform_190784_3	chr9	+	3722	18	FSM	ENSMUSG00000032125.22	ENSMUST00000239486.2	3689	18	-34	1	-20	0	multi-exon	FALSE	canonical	0	0	junction_2	1.08465228909328	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTGTGACATCATTCC	NA	False	NA	NA	False	TATAAA	-12	NA	37313307	37325317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37313448_37313850_37314184_37314447_37314606_37314738_37314860_37315369_37315498_37315588_37315818_37316066_37316180_37316868_37317038_37317193_37317380_37317484_37317528_37319233_37319371_37319468_37319733_37321677_37321786_37321995_37322135_37322275_37322519_37322640_37323000_37324324_37324532_37324672
Isoform_190785_9	chr9	+	2393	6	NIC	ENSMUSG00000042138.10	novel	423	4	NA	NA	-17	35	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	102.024702891016	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	378	False	NA	NA	False	TTTAAA	-42	NA	37400597	37435481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_37401130_37402751_37402866_37424909_37425000_37428668_37428769_37430022_37430084_37433985
Isoform_190786_6	chr9	+	6059	5	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-15	34	intron_retention	FALSE	canonical	3	20	junction_1	105.264844558855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGTGCTAGTTGAGC	380	False	NA	NA	False	TTTAAA	-41	NA	37400599	37435480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_37401130_37402751_37402866_37424909_37428769_37430022_37430084_37433985
Isoform_190787_4	chr9	+	2434	5	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-16	35	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	103.639700404816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	379	False	NA	NA	False	TTTAAA	-42	NA	37400598	37435481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_37401130_37424909_37425000_37428512_37428769_37430022_37430084_37433985
Isoform_190788_23	chr9	+	2281	5	NIC	ENSMUSG00000042138.10	novel	423	4	NA	NA	-18	36	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	97.7010747126151	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	377	False	NA	NA	False	TTTAAA	-43	NA	37400596	37435482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_37401130_37424909_37425000_37428668_37428769_37430022_37430084_37433985
Isoform_190789_42	chr9	+	5946	4	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-15	35	intron_retention	FALSE	canonical	3	44	junction_1	87.9406365428154	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	380	False	NA	NA	False	TTTAAA	-42	NA	37400599	37435481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_37401130_37424909_37428769_37430022_37430084_37433985
Isoform_190790_52	chr9	+	2346	4	FSM	ENSMUSG00000042138.10	ENSMUST00000048604.8	2291	4	-20	-35	-18	35	multi-exon	FALSE	canonical	3	35	junction_1	92.182186758373	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	377	False	NA	NA	False	TTTAAA	-42	NA	37400596	37435481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
Isoform_190791_4	chr9	+	2656	4	FSM	ENSMUSG00000042138.10	ENSMUST00000239459.2	2591	4	-30	-35	-30	35	multi-exon	FALSE	canonical	3	35	junction_1	92.182186758373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	67	False	NA	NA	False	TTTAAA	-42	NA	37400286	37435481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
Isoform_190793_99	chr9	+	2190	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	-299	-1468	-18	35	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	377	False	NA	NA	False	TTTAAA	-42	NA	37400596	37435481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
Isoform_190794_5	chr9	+	2450	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	-559	-1468	20	35	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	117	False	NA	NA	False	TTTAAA	-42	NA	37400336	37435481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
Isoform_190796_4	chr9	+	2459	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	-605	-1431	-26	0	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	71	False	NA	NA	False	TTTAAA	-5	NA	37400290	37435444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
Isoform_1908_13	chr10	-	1951	3	FSM	ENSMUSG00000019838.12	ENSMUST00000213488.2	2325	3	1	373	0	-373	multi-exon	FALSE	canonical	3	21	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAAAGGTGTTCTCTCT	7143	False	NA	NA	False	AATAAA	-32	NA	40018250	39951759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_39953014_39956658_39956804_40017698
Isoform_190805_4	chr9	+	1161	7	FSM	ENSMUSG00000001943.9	ENSMUST00000002008.7	1166	7	5	0	5	0	multi-exon	FALSE	canonical	0	0	junction_1	3.13138237134266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTTCTCCTTTCTAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	37450555	37455497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37450735_37451164_37451323_37451589_37451798_37452622_37452782_37453650_37453771_37453884_37454030_37455305
Isoform_190806_3	chr9	+	1353	6	ISM	ENSMUSG00000001943.9	ENSMUST00000002008.7	1166	7	243	0	204	0	3prime_fragment	FALSE	canonical	2	5	junction_5	1.62480768092719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTTCTCCTTTCTAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	37450793	37455497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_37451323_37451589_37451798_37452622_37452782_37453650_37453771_37453884_37454030_37455305
Isoform_190810_41	chr9	+	3391	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	157	1399	0	1	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCGTTTCCAGTTTGA	NA	False	NA	NA	False	AATATA	-15	NA	37525122	37559552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
Isoform_190812_17	chr9	+	4229	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	118	600	-39	-600	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCTTATTGTATTTTG	NA	False	NA	NA	False	NA	NA	NA	37525083	37560351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
Isoform_190814_3	chr9	+	4805	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	141	1	-16	-1	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37525106	37560950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
Isoform_190815_3	chr9	+	5383	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	146	-582	-11	582	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGGGATCAGGTTATTA	NA	False	NA	NA	False	AATAAA	-13	NA	37525111	37561533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
Isoform_190819_17	chr9	+	3860	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	34	263	30	-263	multi-exon	TRUE	canonical	2	10	junction_6	2.97449918967259	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAAGGTTTTTCTGGGA	NA	False	NA	NA	False	NA	NA	NA	38629597	38654370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
Isoform_190822_3	chr9	+	3460	7	FSM	ENSMUSG00000025602.14	ENSMUST00000026693.14	3461	7	-6	7	-5	-7	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATACATCTATGCCTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	40103606	40124478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_40103734_40118494_40118991_40119600_40119812_40120173_40120263_40121062_40121193_40121736_40121857_40122191
Isoform_190823_4	chr9	+	4130	7	FSM	ENSMUSG00000049281.17	ENSMUST00000049941.12	4150	7	20	0	20	0	multi-exon	FALSE	canonical	0	0	junction_6	1.06718737290547	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGGGTTTGCTATG	NA	False	NA	NA	False	AATAAA	-40	NA	40180532	40202914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_40180899_40181263_40181344_40188363_40188528_40190670_40190897_40193719_40193859_40199669_40199750_40199839
Isoform_190825_6	chr9	+	1154	4	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	86454	2187	-1628	661	3prime_fragment	FALSE	canonical	3	9	junction_1	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTCTACTTTGACT	NA	False	NA	NA	False	AAGAAA	-36	NA	40683761	40694428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_40683825_40685658_40685782_40692408_40692551_40693602
Isoform_190828_9	chr9	+	2338	8	ISM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	292	0	0	0	intron_retention	FALSE	canonical	3	3928	junction_3	5928.96304386443	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758
Isoform_190830_112	chr9	+	2407	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	-13	0	-13	0	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2154	False	NA	10	True	AATAAA	-20	NA	40712266	40716496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_190835_100	chr9	+	2203	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	3928	junction_3	6242.18814002832	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2457	False	NA	10	True	AATAAA	-20	NA	40712569	40716496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
Isoform_190836_7	chr9	+	2327	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	3928	junction_3	6139.74894454495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2456	False	NA	10	True	AATAAA	-20	NA	40712568	40716496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715660_40715758_40715992_40716227
Isoform_190840_19	chr9	+	2183	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_3	5605.38982605499	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2459	False	NA	9	True	AATAAA	-19	NA	40712571	40716495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_190842_11	chr9	+	2219	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	7746	junction_3	4368.47570669679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2457	False	NA	10	True	AATAAA	-20	NA	40712569	40716496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_40712645_40713213_40713424_40713713_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_190844_21	chr9	+	2392	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_2	6450.55656513452	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_40712645_40713213_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_190845_7	chr9	+	2491	7	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	3928	junction_2	6696.88849806801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGTTGTCCTGACTGA	2457	False	NA	8	True	AATAAA	-18	NA	40712569	40716494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_40712645_40713213_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
Isoform_190847_24	chr9	+	2308	9	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	7902.13270955221	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2525	False	NA	10	True	AATAAA	-20	NA	40712637	40716496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_40712917_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_190851_11	chr9	+	2673	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	3928	junction_2	6440.2006179932	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2457	False	NA	10	True	AATAAA	-20	NA	40712569	40716496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_190852_38	chr9	+	2198	8	ISM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	765	0	288	0	3prime_fragment	FALSE	canonical	3	3928	junction_2	6440.2006179932	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2932	False	NA	10	True	AATAAA	-20	NA	40713044	40716496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_190866_10	chr9	+	5883	6	FSM	ENSMUSG00000032012.10	ENSMUST00000034510.9	5653	6	-236	6	-236	-6	multi-exon	FALSE	canonical	3	13	junction_5	3.03315017762062	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCCAAGTGCCTCT	NA	False	NA	NA	False	AATAAA	-8	NA	43655044	43718752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_43656020_43702333_43702685_43703173_43703477_43703744_43703863_43705386_43705539_43714768
Isoform_190867_19	chr9	+	5657	6	FSM	ENSMUSG00000032012.10	ENSMUST00000034510.9	5653	6	-10	6	-10	-6	multi-exon	FALSE	canonical	3	13	junction_5	3.03315017762062	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCCAAGTGCCTCT	NA	False	NA	NA	False	AATAAA	-8	NA	43655270	43718752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_43656020_43702333_43702685_43703173_43703477_43703744_43703863_43705386_43705539_43714768
Isoform_190870_14	chr9	+	1707	4	FSM	ENSMUSG00000032011.6	ENSMUST00000114840.2	1735	4	28	0	28	0	multi-exon	FALSE	canonical	3	7	junction_3	3.74165738677394	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGTCTGTCTCTTCT	NA	False	NA	34	True	AATAAA	-20	NA	43954708	43959876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_43954774_43957253_43957316_43957910_43958250_43958635
Isoform_190871_40	chr9	+	2117	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	57	1693	0	1	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACACC	NA	False	NA	NA	False	NA	NA	NA	43978374	44005231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_190875_5	chr9	+	3868	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	-3	2	-3	-2	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGTGTGACGGTCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	43978314	44006922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_190876_38	chr9	+	3805	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	60	2	3	-2	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGTGTGACGGTCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	43978377	44006922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_190877_27	chr9	+	1533	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	-19	543	-19	1	multi-exon	FALSE	canonical	3	22	junction_1	11.7473401244707	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACACC	2229	False	NA	NA	False	NA	NA	NA	43996216	44005231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_190879_25	chr9	+	3191	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	14	-1148	3	-2	multi-exon	FALSE	canonical	3	22	junction_1	11.7473401244707	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGTGTGACGGTCTTG	2262	False	NA	NA	False	AATAAA	-18	NA	43996249	44006922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_190880_44	chr9	+	2880	16	FSM	ENSMUSG00000032135.16	ENSMUST00000034650.15	2989	16	99	10	0	-7	multi-exon	FALSE	canonical	3	21	junction_3	5.20085463062456	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAAGCATGATGCTGTG	7	False	NA	9	True	AATAAA	-11	NA	44045957	44054014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
Isoform_190883_245	chr9	+	1930	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	-18	293	-18	-287	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCATCCCCTCCCTCTG	3756	False	NA	24	True	AATAAA	-27	NA	44238123	44244904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
Isoform_190887_25	chr9	+	2173	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	26	6	-2	0	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGATCACAGTGCTCC	3800	False	NA	NA	False	AATAAA	-26	NA	44238167	44245191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
Isoform_190889_7	chr9	+	1769	8	FSM	ENSMUSG00000032123.6	ENSMUST00000215050.2	2050	8	-13	294	-13	-294	multi-exon	FALSE	canonical	3	5	junction_1	96.7247303919104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	3789	False	NA	17	True	AATAAA	-20	NA	44238156	44244897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44238503_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
Isoform_190892_4	chr9	+	1873	8	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	675	3	-463	3	3prime_fragment	FALSE	canonical	3	234	junction_1	26.2880433750745	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCACAGTGCTCCATT	4449	False	NA	NA	False	AATAAA	-29	NA	44238816	44245194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
Isoform_190897_1619	chr9	+	4372	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	53	7	-3	-1	multi-exon	FALSE	canonical	3	476	junction_1	89.8853847964173	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	0	True	AATAAA	-16	NA	44290839	44303659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
Isoform_190898_82	chr9	+	4407	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	18	7	18	-1	multi-exon	TRUE	canonical	3	476	junction_1	89.8853847964173	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	0	True	AATAAA	-16	NA	44290804	44303659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
Isoform_190902_57	chr9	+	4395	26	NIC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	163.052806170271	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGCTTCTTCCCT	NA	False	NA	5	True	AATAAA	-21	NA	44290902	44303664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_44290974_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
Isoform_190903_120	chr9	+	4486	26	FSM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	1	2	1	-2	multi-exon	FALSE	canonical	3	92	junction_1	153.155429547894	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290870	44303658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
Isoform_190906_308	chr9	+	4637	26	FSM	ENSMUSG00000032115.15	ENSMUST00000160902.8	3374	26	-3	-1260	-3	-1	multi-exon	FALSE	canonical	3	130	junction_1	146.389890361322	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	0	True	AATAAA	-16	NA	44290916	44303659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
Isoform_19091_8	chr11	+	2194	6	FSM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	379	0	-7	0	multi-exon	FALSE	canonical	2	3	junction_1	4.60434577328853	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGTGGTGATGAGG	NA	False	NA	NA	False	TATAAA	-25	NA	3280779	3292971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3281005_3281914_3282032_3282108_3282229_3283208_3283413_3283504_3283584_3291522
Isoform_19092_137	chr11	+	689	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	18	0	18	0	multi-exon	FALSE	canonical	3	143	junction_4	6.04152298679729	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	22	True	ACTAAA	-14	NA	3464884	3467351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
Isoform_19093_3	chr11	+	674	4	NIC	ENSMUSG00000075702.11	novel	707	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	68.794379615392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	22	True	ACTAAA	-14	NA	3464864	3467351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3465074_3466260_3466297_3466841_3466921_3467001
Isoform_190942_25	chr9	+	2131	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	1	-4	1	-2	multi-exon	FALSE	canonical	1	5	junction_1	8.7740740252177	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGGCTCATCCT	NA	False	NA	NA	False	AATAAA	-17	NA	44308149	44314261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
Isoform_190944_13	chr9	+	2340	9	FSM	ENSMUSG00000032114.10	ENSMUST00000213388.2	2344	9	0	4	0	-2	multi-exon	FALSE	canonical	2	2	junction_1	9.53939201416946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGGCTCATCCT	NA	False	NA	NA	False	AATAAA	-17	NA	44308395	44314261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44308744_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
Isoform_190945_20	chr9	+	2367	9	NIC	ENSMUSG00000032114.10	novel	2344	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.7740740252177	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGGCTCATCCT	NA	False	NA	NA	False	AATAAA	-17	NA	44308395	44314261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_44308771_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
Isoform_190950_1864	chr9	+	520	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	523	237	2	1	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	1864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGGGTGCATCTGTT	NA	False	NA	90	True	AATAAA	-15	NA	44318958	44321487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
Isoform_190951_3847	chr9	+	486	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	557	237	1	1	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	3847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGGGTGCATCTGTT	NA	False	NA	90	True	AATAAA	-15	NA	44318992	44321487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
Isoform_19096_56	chr11	+	5457	27	FSM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	-266	-106	37	-1	multi-exon	FALSE	canonical	2	110	junction_1	78.9355590669193	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599227	3640476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_190963_3	chr9	+	5803	8	FSM	ENSMUSG00000063382.7	ENSMUST00000220303.2	5760	8	-76	33	-76	-33	multi-exon	FALSE	canonical	2	12	junction_1	3.98978286964827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGAAAAAAAAAAGATTGA	1842	False	NA	6	True	NA	NA	NA	44394045	44421686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44394784_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
Isoform_190964_3	chr9	+	3388	3	ISM	ENSMUSG00000063382.7	ENSMUST00000074989.7	5339	9	7326	31	7190	-30	3prime_fragment	FALSE	canonical	3	13	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAGATTGAGAA	NA	False	NA	9	True	NA	NA	NA	44417758	44421689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_44419168_44419449_44419732_44419992
Isoform_190970_5	chr9	+	2853	14	FSM	ENSMUSG00000032097.11	ENSMUST00000217034.2	6029	14	-46	3222	-42	-3222	multi-exon	FALSE	canonical	3	13	junction_1	7.66070431047592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATATATATATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	44516146	44548806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44516250_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
Isoform_190977_226	chr9	+	1570	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-196	-315	-3	0	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCTCATTAGTGTC	NA	False	NA	10	True	AATACA	-19	NA	44684253	44702192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
Isoform_190982_1288	chr9	+	2920	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	182	5	-89	-5	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATGATTTTTATTA	NA	False	NA	10	True	AATAAA	-13	NA	44953904	44965308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
Isoform_190991_50	chr9	+	3184	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	-82	5	-82	-5	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATGATTTTTATTA	NA	False	NA	10	True	AATAAA	-13	NA	44953640	44965308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
Isoform_190999_42	chr9	+	3389	6	FSM	ENSMUSG00000070305.11	ENSMUST00000114664.8	3424	6	35	0	12	0	multi-exon	FALSE	canonical	3	16	junction_2	3.70944739819828	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTTCGTGTCTAACT	NA	False	NA	27	True	AATAAA	-20	NA	44966518	44988734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44966617_44973338_44973506_44977636_44977848_44979504_44979671_44981953_44982018_44986051
Isoform_1910_266	chr10	-	1184	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	37	75	3	-75	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAACTTGTGTTTGGA	6594	False	NA	-7	True	TTTAAA	-3	NA	40122995	40099497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
Isoform_191000_687	chr9	+	1552	8	FSM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	236	0	-21	0	multi-exon	FALSE	canonical	3	400	junction_2	224.259325108142	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	604	False	NA	18	True	AATAAA	-22	NA	45281718	45307453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45281787_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_191005_1174	chr9	+	1547	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	236	6	-21	-2	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGACTCTGAGTGGCTTT	604	False	NA	16	True	AATAAA	-20	NA	45281718	45307451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_191006_35	chr9	+	1936	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	-150	3	-150	1	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGAGTGGCTTTTCT	218	False	NA	19	True	AATAAA	-23	NA	45281332	45307454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_191007_36	chr9	+	1769	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	16	4	16	0	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	384	False	NA	18	True	AATAAA	-22	NA	45281498	45307453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_191008_62	chr9	+	1694	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	91	4	91	0	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	459	False	NA	18	True	AATAAA	-22	NA	45281573	45307453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_19101_19	chr11	+	5348	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	45	2	at_least_one_novel_splicesite	FALSE	canonical	2	109	junction_21	96.2034410559514	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599235	3640372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_191019_23	chr9	+	1391	4	ISM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	21295	0	21038	0	3prime_fragment	FALSE	canonical	3	999	junction_2	48.787521173167	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	3357	False	NA	18	True	AATAAA	-22	NA	45302777	45307453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_19102_20	chr11	+	5424	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	72	-2	at_least_one_novel_splicesite	FALSE	canonical	2	109	junction_21	96.2034410559514	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGCGTTCAGTACAT	NA	False	NA	73	True	TATAAA	-14	NA	3599262	3640475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_191023_69	chr9	+	589	6	FSM	ENSMUSG00000059412.8	ENSMUST00000041005.6	632	6	43	0	-33	0	multi-exon	FALSE	canonical	3	206	junction_5	6.73498329619309	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGAGTGCTTATCATTC	NA	False	NA	34	True	AATGAA	-20	NA	45314478	45321576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
Isoform_191026_8	chr9	+	1685	7	ISM	ENSMUSG00000032087.12	ENSMUST00000239429.2	6336	33	43	80198	43	17	5prime_fragment	FALSE	canonical	0	0	junction_3	2.98142396999972	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATCTTTGTGGTCACT	NA	False	NA	NA	False	TTTAAA	-26	NA	45341633	45584264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_45341811_45358962_45359281_45361779_45361927_45572430_45572578_45579286_45579566_45581293_45581570_45583923
Isoform_191027_6	chr9	+	3708	9	NIC	ENSMUSG00000032086.13	novel	6058	9	NA	NA	1	19	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	7.80924932371864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGAGAGAGAGAACTC	7299	False	NA	NA	False	NA	NA	NA	45749878	45773536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_45750587_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
Isoform_19103_110	chr11	+	5620	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	36	0	36	0	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599226	3640477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_191030_14	chr9	+	4107	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	1	1950	1	-35	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTCCTGAAAAATGACT	7299	False	NA	NA	False	NA	NA	NA	45749878	45773747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
Isoform_191034_49	chr9	+	3422	17	FSM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	462	-8	-26	-6	multi-exon	FALSE	canonical	3	28	junction_7	6.25	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTCCACCACTCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	45818256	45841018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
Isoform_191036_3	chr9	+	3526	18	NNC	ENSMUSG00000035382.10	novel	3599	17	NA	NA	-19	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.6807393717513	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCACCACTCCCAG	NA	False	NA	NA	False	AATAAA	-22	NA	45818263	45841019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_45818338_45818491_45818602_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
Isoform_191038_71	chr9	+	2640	14	ISM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-14	19381	-14	9	5prime_fragment	FALSE	canonical	3	79	junction_9	9.59474708356782	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTGTGGGTGTTTTTAT	NA	False	NA	15	True	AATAAA	-23	NA	45924147	46114192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
Isoform_19104_122	chr11	+	5515	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	36	105	36	2	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599226	3640372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_191041_13	chr9	+	2770	14	ISM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-142	19379	-98	11	5prime_fragment	FALSE	canonical	3	79	junction_9	9.59474708356782	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGGTGTTTTTATCA	NA	False	NA	17	True	AATAAA	-25	NA	45924019	46114194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
Isoform_191042_4	chr9	+	4327	22	NNC	ENSMUSG00000034135.16	novel	6287	25	NA	NA	9	-8002	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	33.2422565276128	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTTGTTTGCATAGC	NA	False	NA	NA	False	GGGGCT	-37	NA	45924126	46124530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46124381_46124410
Isoform_191043_25	chr9	+	6250	25	FSM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	29	8	-15	-2	multi-exon	FALSE	canonical	3	33	junction_17	28.1424945589406	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTGATATGTTGTTTGC	NA	False	NA	15	True	AATAAA	-17	NA	45924146	46135484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
Isoform_191044_6	chr9	+	4492	25	FSM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	-111	1906	-111	13	multi-exon	FALSE	canonical	3	33	junction_17	28.1424945589406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCATGAGCCAGCATC	NA	False	NA	14	True	AATAAA	-20	NA	45924006	46133586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
Isoform_191048_3	chr9	+	6362	25	FSM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	-84	9	-84	-3	multi-exon	FALSE	canonical	3	33	junction_17	28.1424945589406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGCTGATATGTTGTTTG	NA	False	NA	14	True	AATAAA	-16	NA	45924033	46135483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
Isoform_191049_4	chr9	+	6121	24	FSM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-26	-1915	18	2	multi-exon	FALSE	canonical	2	8	junction_14	29.7947610878116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATATGTTGTTTGCCTTA	NA	False	NA	19	True	AATAAA	-21	NA	45924135	46135488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
Isoform_191056_105	chr9	+	2879	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	103	2	-26	-2	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTTGGTACAGCGTCCA	NA	False	NA	NA	False	AATAAA	-16	NA	46184464	46193939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
Isoform_191057_809	chr9	+	1840	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	103	1041	-26	118	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGCCTCTGCGTTCATG	NA	False	NA	12	True	ATTAAA	-19	NA	46184464	46192900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
Isoform_19106_16	chr11	+	5575	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	-31	112	-31	-5	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAATTTGGCCCTGCAT	NA	False	NA	19	True	CATAAA	-12	NA	3599159	3640365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_191062_11	chr9	+	2617	13	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-19	119	intron_retention	FALSE	canonical	3	619	junction_8	53.3423820448827	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCCTCTGCGTTCATGT	NA	False	NA	13	True	ATTAAA	-20	NA	46184471	46192901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
Isoform_191071_439	chr9	+	2202	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	9	328	9	-1	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTCCTAACTGGGTAT	NA	False	NA	44	True	AATAAA	-21	NA	46194314	46210080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
Isoform_191072_5	chr9	+	3425	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	-7	-879	-7	879	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCTTGTACACACTTTC	NA	False	NA	NA	False	NA	NA	NA	46194298	46211287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
Isoform_191076_22	chr9	+	2380	7	FSM	ENSMUSG00000032076.21	ENSMUST00000151624.2	1112	7	-19	-1249	2	1249	multi-exon	FALSE	canonical	3	300	junction_2	18.6904610251682	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGCAAACGTCTAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	47441651	47726601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070
Isoform_191080_53	chr9	+	1457	9	ISM	ENSMUSG00000032076.21	ENSMUST00000152459.8	1784	12	141	20862	0	-4723	5prime_fragment	FALSE	canonical	3	173	junction_8	54.4885309033011	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTAAAGTGTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	47441649	47741023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674
Isoform_191082_140	chr9	+	2035	11	FSM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	95	-4	0	4	multi-exon	FALSE	canonical	3	105	junction_9	77.3110600108419	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	47441649	47762331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
Isoform_191085_41	chr9	+	4384	11	FSM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	97	-2355	2	-1	multi-exon	FALSE	canonical	3	105	junction_9	77.3110600108419	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTAAATCTCTTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	47441651	47764682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
Isoform_191086_163	chr9	+	2000	10	FSM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	97	2347	2	4	multi-exon	FALSE	canonical	3	143	junction_8	60.0832755431992	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	47441651	47762331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
Isoform_191090_55	chr9	+	4351	10	FSM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	97	-4	2	-1	multi-exon	FALSE	canonical	3	143	junction_8	60.0832755431992	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTAAATCTCTTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	47441651	47764682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
Isoform_191094_1487	chr9	+	4203	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-70	0	10	0	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896694	48953810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
Isoform_191096_32	chr9	+	4264	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-131	0	-41	0	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896633	48953810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
Isoform_191104_31	chr9	+	4127	24	FSM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	-19	1	10	-1	multi-exon	FALSE	canonical	3	58	junction_12	166.491369690667	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATGTAGCATGACCCTT	NA	False	NA	12	True	AATAAA	-18	NA	48896694	48953809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935280_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
Isoform_191105_20	chr9	+	4026	23	NIC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_12	175.933525434753	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAGCATGACCCTTTT	NA	False	NA	14	True	AATAAA	-20	NA	48896692	48953811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
Isoform_19111_80	chr11	+	5609	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	49	-1	intron_retention	FALSE	canonical	2	109	junction_20	77.0319414269172	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599239	3640476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_191127_615	chr9	+	2861	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	1	1	1	-1	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTGAGTGTCTTTAATA	NA	False	NA	19	True	AGTAAA	-15	NA	48966913	48990071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
Isoform_191128_41	chr9	+	2893	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	-32	2	-32	-2	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTGAGTGTCTTTAAT	NA	False	NA	18	True	AGTAAA	-14	NA	48966880	48990070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
Isoform_19113_9	chr11	+	6127	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	45	513	intron_retention	FALSE	canonical	2	109	junction_20	77.0319414269172	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCTGTGGTATGTGT	NA	False	NA	NA	False	AATATA	-23	NA	3599235	3640990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_191139_57	chr9	+	1339	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	5	345	3	-345	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCGAAATGTGCTAAATT	NA	False	NA	NA	False	AATAAA	-18	NA	50405829	50416437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
Isoform_191141_152	chr9	+	511	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	6	1	6	-1	multi-exon	FALSE	canonical	3	1341	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGTTCTTCTAAATCC	8819	False	NA	20	True	AATAAA	-14	NA	50515215	50516619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50515340_50516232
Isoform_191142_608	chr9	+	482	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	33	3	33	-3	multi-exon	FALSE	canonical	3	1341	junction_1	0	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTGTTCTTCTAAAT	8846	False	NA	18	True	AATAAA	-12	NA	50515242	50516617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50515340_50516232
Isoform_191146_10	chr9	+	935	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	102	-91	-11	-2	multi-exon	FALSE	canonical	3	16	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTCGTGTTTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	50664308	50667934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50664778_50665811_50665935_50667591
Isoform_191148_42	chr9	+	1969	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	20	669	5	10	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGTGGTTTTGTTTT	NA	False	NA	12	True	AAAAAG	-27	NA	50679555	50683979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
Isoform_191149_23	chr9	+	2636	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	20	2	5	-2	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTGGAGCATGTGTCC	NA	False	NA	NA	False	NA	NA	NA	50679555	50684646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
Isoform_191152_3	chr9	+	3292	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	2	-636	0	636	multi-exon	TRUE	canonical	3	72	junction_2	7.15454401062709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAAATACCCCTTCA	NA	False	NA	NA	False	NA	NA	NA	50679537	50685284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
Isoform_191154_3	chr9	+	2285	5	NNC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	32.2674371464484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTGGTTTTGTTTTG	NA	False	NA	13	True	AAAAAG	-28	NA	50679538	50683980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_50679756_50679987_50680145_50681409_50681790_50681809_50682091_50682730
Isoform_191155_286	chr9	+	2581	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	300	-8	14	-6	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTTTTAATGTTTCAG	NA	False	NA	32	True	TTTAAA	-39	NA	50686618	50754836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_191158_28	chr9	+	2704	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	279	-110	-7	96	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAGTAGTCTGAGGC	NA	False	NA	134	True	AATAGA	-16	NA	50686597	50754938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_191159_14	chr9	+	3407	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	290	-824	4	810	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGTAGTTGAATGAA	NA	False	NA	NA	False	AGTAAA	-10	NA	50686608	50755652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_191162_17	chr9	+	2467	14	NIC	ENSMUSG00000032059.14	novel	2873	15	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	55.2657913388354	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTTAAGATTTTTTTA	NA	False	NA	23	True	TTTAAA	-30	NA	50686600	50754827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_191163_66	chr9	+	2510	14	FSM	ENSMUSG00000032059.14	ENSMUST00000162073.8	2530	14	12	8	12	6	multi-exon	FALSE	canonical	3	64	junction_3	42.7472273227982	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTTTTTTAATGTTTC	NA	False	NA	30	True	TTTAAA	-37	NA	50686616	50754834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_191167_18	chr9	+	2831	15	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	50.3522794004038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTTTCAGTCTGCTT	NA	False	NA	39	True	NA	NA	NA	50686840	50754843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_191169_14	chr9	+	2752	14	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	-6	6	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	59.440487865033	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTTTTTTAATGTTTC	NA	False	NA	30	True	TTTAAA	-37	NA	50686839	50754834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_19117_16	chr11	+	5677	25	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	59	-2	intron_retention	FALSE	canonical	2	298	junction_19	51.9931719608984	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGCGTTCAGTACAT	NA	False	NA	73	True	TATAAA	-14	NA	3599249	3640475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_191173_1311	chr9	+	3202	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	36	192	-6	-192	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAATTGTGTAAATGC	23	False	NA	6	True	ATTAAA	-12	NA	50768272	50792539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
Isoform_191175_32	chr9	+	3581	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	34	-185	5	185	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTACCCCCCAGCCTTG	21	True	NA	NA	False	AATAAA	-19	NA	50768270	50792916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
Isoform_191177_128	chr9	+	3227	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	11	192	-9	-192	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAATTGTGTAAATGC	-2	True	NA	6	True	ATTAAA	-12	NA	50768247	50792539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
Isoform_19119_11	chr11	+	5734	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	37	-2	intron_retention	FALSE	canonical	2	20	junction_1	117.313921650492	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGCGTTCAGTACAT	NA	False	NA	73	True	TATAAA	-14	NA	3599227	3640475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
Isoform_191201_1566	chr9	+	4227	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	156	-3	0	-3	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGGTCCGCTGTTGTT	NA	False	NA	18	True	AATAAA	-18	NA	51959570	52000032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
Isoform_191203_175	chr9	+	4523	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	-140	-3	-140	-3	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGGTCCGCTGTTGTT	NA	False	NA	18	True	AATAAA	-18	NA	51959274	52000032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
Isoform_191229_175	chr9	+	3497	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	49	96	49	-96	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAACTCCATGTACTTT	9321	False	NA	NA	False	AATAAA	-20	NA	53295373	53313071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
Isoform_191230_48	chr9	+	3576	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	-30	96	-30	-96	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAACTCCATGTACTTT	9242	False	NA	NA	False	AATAAA	-20	NA	53295294	53313071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
Isoform_191246_4	chr9	+	3662	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	-21	1	-21	-1	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTTGCCTGCATAAATA	9251	False	NA	NA	False	NA	NA	NA	53295303	53313166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
Isoform_191253_65	chr9	+	5891	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	2	169	2	-169	multi-exon	TRUE	canonical	3	111	junction_15	17.5635277962748	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTTTGGATTTATATTT	NA	False	NA	11	True	AATAAA	-19	NA	53448348	53485473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
Isoform_191255_13	chr9	+	7274	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	13	-1225	13	1225	multi-exon	FALSE	canonical	3	111	junction_15	17.5635277962748	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAGCTTAATTGATACT	NA	False	NA	10	True	AATAAA	-23	NA	53448359	53486867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
Isoform_191259_4	chr9	+	5504	19	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	23	-364	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	32.2756740565161	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGTCTTCAAGATGTA	NA	False	NA	NA	False	AATAAA	-23	NA	53448369	53485278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
Isoform_191260_3	chr9	+	5871	19	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	23	3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	32.2756740565161	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTATGTGTGTTTTTA	NA	False	NA	NA	False	TATAAA	-21	NA	53448369	53485645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
Isoform_191261_318	chr9	+	2382	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	191	-15	191	15	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTTTGTTTGTTTGTT	NA	False	NA	54	True	ATTAAA	-30	NA	53679012	53725453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
Isoform_191262_57	chr9	+	2422	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	146	-10	146	10	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACAATGTGTTTGTTTGT	NA	False	NA	49	True	ATTAAA	-25	NA	53678967	53725448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
Isoform_191264_32	chr9	+	2611	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	-43	-10	-43	10	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACAATGTGTTTGTTTGT	NA	False	NA	49	True	ATTAAA	-25	NA	53678778	53725448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
Isoform_191271_638	chr9	+	2424	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-20	-1	10	1	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCGTTTGCATTCTCT	NA	False	NA	36	True	AATAAA	-16	NA	54493774	54511946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
Isoform_191272_37	chr9	+	2463	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-59	-1	-29	1	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCGTTTGCATTCTCT	NA	False	NA	36	True	AATAAA	-16	NA	54493735	54511946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
Isoform_191273_2183	chr9	+	1712	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-30	721	0	4	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCATAATGAATGATGTA	NA	False	NA	50	True	AATAAA	-17	NA	54493764	54511224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
Isoform_191276_136	chr9	+	1741	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-59	721	-29	4	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCATAATGAATGATGTA	NA	False	NA	50	True	AATAAA	-17	NA	54493735	54511224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
Isoform_191295_7	chr9	+	2097	7	FSM	ENSMUSG00000032285.16	ENSMUST00000070070.8	3003	7	0	906	0	648	multi-exon	FALSE	canonical	3	8	junction_3	1.95078331845327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGTTCTTTGTGCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	54606842	54622693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54607145_54613346_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
Isoform_191297_5	chr9	+	3002	7	FSM	ENSMUSG00000032285.16	ENSMUST00000070070.8	3003	7	1	0	1	0	multi-exon	FALSE	canonical	3	8	junction_3	1.95078331845327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGGCTTTGCTTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	54606843	54623599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54607145_54613346_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
Isoform_191299_87	chr9	+	772	4	FSM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	30	0	30	0	multi-exon	FALSE	canonical	3	250	junction_3	35.3679076125361	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGCTCTTTCTTTGA	NA	False	NA	18	True	ATTAAA	-14	NA	54672061	54680394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54672256_54672766_54672946_54675667_54675782_54680109
Isoform_1913_265	chr10	-	1223	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	-2	75	-2	-75	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAACTTGTGTTTGGA	6555	False	NA	-7	True	TTTAAA	-3	NA	40123034	40099497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
Isoform_191300_117	chr9	+	743	4	FSM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	59	0	59	0	multi-exon	FALSE	canonical	3	250	junction_3	35.3679076125361	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGCTCTTTCTTTGA	NA	False	NA	18	True	ATTAAA	-14	NA	54672090	54680394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54672256_54672766_54672946_54675667_54675782_54680109
Isoform_191302_192	chr9	+	5822	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-55	3	-55	-3	multi-exon	TRUE	canonical	3	193	junction_6	38.4690587449917	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGACTCGTTGTGTTT	2571	False	NA	11	True	AATAAA	-16	NA	54771017	54819811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
Isoform_191306_19	chr9	+	5602	21	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-53	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	64.8093164599041	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGACTCGTTGTGTTTT	2573	False	NA	12	True	AATAAA	-17	NA	54771019	54819812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
Isoform_191329_11	chr9	+	5135	5	FSM	ENSMUSG00000035878.14	ENSMUST00000039742.8	5110	5	-32	7	-32	-7	multi-exon	FALSE	canonical	2	6	junction_2	1.29903810567666	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTTACCTTTTGGTCT	NA	False	NA	6	True	ATTAAA	-19	NA	54824534	54857201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54825143_54827757_54828109_54829478_54829619_54844422_54844607_54853349
Isoform_19133_5	chr11	+	4622	2	FSM	ENSMUSG00000047205.13	ENSMUST00000055931.5	4632	2	13	-3	13	3	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCATCCTCAAATTCT	5258	False	NA	NA	False	AATAAA	-20	NA	3845252	3851299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3845518_3846942
Isoform_191332_2092	chr9	+	1147	9	FSM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	25	-7	0	7	multi-exon	FALSE	canonical	3	1650	junction_8	116.746252616519	2092	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGGATACTTTCTCTGT	NA	False	NA	9	True	AATAAA	-22	NA	54858098	54865321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
Isoform_191344_5	chr9	+	1915	6	FSM	ENSMUSG00000035594.11	ENSMUST00000213960.2	1737	6	-85	-93	-18	0	multi-exon	FALSE	canonical	1	1	junction_4	1.2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGTCTTGTTAAATTG	NA	False	NA	NA	False	AGTAAA	-31	NA	54888731	54914202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_54889006_54905295_54905448_54907735_54907781_54909683_54909794_54911614_54912444_54913697
Isoform_191346_1064	chr9	+	2924	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	525	7	-16	-7	multi-exon	FALSE	canonical	3	762	junction_1	63.2035402489449	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGTTTGTCACCTTT	NA	False	NA	3	True	AATAAA	-11	NA	55056662	55114806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
Isoform_191347_88	chr9	+	3003	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	446	7	-95	-7	multi-exon	TRUE	canonical	3	762	junction_1	63.2035402489449	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGTTTGTCACCTTT	NA	False	NA	3	True	AATAAA	-11	NA	55056583	55114806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
Isoform_19135_4	chr11	+	3647	3	NNC	ENSMUSG00000047205.13	novel	4632	2	NA	NA	-14	-438	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGACCTATGACTTT	5231	False	NA	NA	False	AATAAA	-18	NA	3845225	3850858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_3845518_3846942_3847771_3848331
Isoform_191364_2120	chr9	+	2076	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	35	1	-26	1	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	2120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGTTGTAATTATTGC	NA	False	NA	10	True	AATAAA	-17	NA	55116243	55131716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
Isoform_19137_1653	chr11	+	2101	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	26	784	-8	-784	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTCTGTGTTCAGAA	NA	False	NA	24	True	NA	NA	NA	3914000	3929220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
Isoform_19138_1621	chr11	+	2124	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	3	784	3	-784	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTCTGTGTTCAGAA	NA	False	NA	24	True	NA	NA	NA	3913977	3929220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
Isoform_191380_4	chr9	+	2438	11	FSM	ENSMUSG00000032313.12	ENSMUST00000034862.5	2408	11	-30	0	6	0	multi-exon	TRUE	canonical	0	0	junction_1	1.98997487421324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGCTAGTAGAGGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	55234202	55345629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_55234285_55284763_55284898_55287962_55288152_55305024_55305180_55307857_55307932_55321147_55321205_55322223_55322363_55325291_55325408_55337558_55337749_55342474_55342538_55344390
Isoform_191381_4	chr9	+	2328	11	NNC	ENSMUSG00000032313.12	novel	2408	11	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.98997487421324	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGCTAGTAGAGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	55234205	55345628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_55234285_55284763_55284898_55287962_55288152_55305024_55305074_55307857_55307932_55321147_55321205_55322223_55322363_55325291_55325408_55337558_55337749_55342474_55342538_55344390
Isoform_191382_9	chr9	+	1370	3	ISM	ENSMUSG00000032313.12	ENSMUST00000034862.5	2408	11	103446	2	97194	-2	3prime_fragment	FALSE	canonical	2	4	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCTGGCTAGTAGAGGT	NA	False	NA	NA	False	AATAAA	-16	NA	55337678	55345627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_55337749_55342474_55342538_55344390
Isoform_191383_337	chr9	+	2012	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	13	-1	0	1	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGCACCTGAGACATTTT	973	False	NA	19	True	ATTAAA	-20	NA	55949153	55966362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
Isoform_191384_39	chr9	+	2038	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	-12	-2	0	2	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCACCTGAGACATTTTC	948	False	NA	20	True	ATTAAA	-21	NA	55949128	55966363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
Isoform_191392_13	chr9	+	1871	15	FSM	ENSMUSG00000032322.15	ENSMUST00000059206.8	1863	15	-19	11	-19	1	multi-exon	FALSE	canonical	1	2	junction_9	2.96922995583236	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCGGCACATTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55997226	56036161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035010_56035145_56035872
Isoform_191394_5	chr9	+	1910	8	FSM	ENSMUSG00000032329.5	ENSMUST00000217518.2	2468	8	-3	561	1	-561	multi-exon	FALSE	canonical	3	179	junction_3	24.8160580006954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTAGTGTCATGATTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	56326104	56397004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897
Isoform_191395_33	chr9	+	1984	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	171	-455	0	455	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	56326098	56398064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
Isoform_191396_7	chr9	+	2171	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	-17	-454	-17	454	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	56325910	56398063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
Isoform_1914_19	chr10	-	1478	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	-1	-181	-1	0	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGGCTTTTTACCCA	6556	False	NA	85	True	NA	NA	NA	40123033	40099241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
Isoform_191400_109	chr9	+	3505	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	221	52	0	-52	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATGTGCTTGCCTGA	NA	False	NA	19	True	ATTAAA	-20	NA	56326113	56404168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
Isoform_191401_51	chr9	+	3571	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	206	1	0	-1	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTGACCAGTTTTGC	NA	False	NA	10	True	ATTAAA	-16	NA	56326098	56404219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
Isoform_191403_15	chr9	+	3708	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	19	51	-16	-51	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGATGTGCTTGCCTGAC	NA	False	NA	20	True	ATTAAA	-21	NA	56325911	56404169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
Isoform_191404_6	chr9	+	3752	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	23	3	-12	-3	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATGTGACCAGTTTT	NA	False	NA	8	True	ATTAAA	-14	NA	56325915	56404217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
Isoform_191405_3	chr9	+	625	5	NNC	ENSMUSG00000097870.3	novel	2655	3	NA	NA	-1	4700	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.04633819296811	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGGAAGTTTGTAACT	NA	False	NA	NA	False	CATAAA	-27	NA	56513975	56526457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_56514031_56516225_56516370_56519300_56519506_56524511_56524549_56526273
Isoform_191407_3	chr9	+	4529	4	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	41	8770	41	-8770	intron_retention	FALSE	canonical	3	166	junction_1	18.1536650722535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56858202	56881720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537
Isoform_191408_140	chr9	+	1346	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	41	4	41	-4	multi-exon	TRUE	canonical	3	166	junction_1	20.9105236663265	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGTTGCTTGTGGTTAT	NA	False	NA	4	True	AATATA	-15	NA	56858202	56890486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
Isoform_191410_25	chr9	+	2793	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	41	-1443	41	1443	multi-exon	FALSE	canonical	3	166	junction_1	20.9105236663265	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56858202	56891933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
Isoform_191415_31	chr9	+	4073	13	FSM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	27	1	27	-1	multi-exon	FALSE	canonical	3	24	junction_7	5.9207732227772	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTTAGTTTCATCAA	NA	False	NA	NA	False	TATAAA	-17	NA	56902233	56970090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
Isoform_191416_26	chr9	+	4067	14	NNC	ENSMUSG00000032290.8	novel	4101	13	NA	NA	3	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	11.2291885083568	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTAGTTTCATCAATT	NA	False	NA	NA	False	ATTAAA	-1	NA	56902209	56970092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228_56969670_56969701
Isoform_191420_41	chr9	+	4967	22	NIC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	80.3294520190322	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGTAACATAAGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	56979325	57035642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_56979348_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_191423_47	chr9	+	4859	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	70.7226979123393	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGTAACATAAGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	56979325	57035642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_191428_59	chr9	+	5200	22	FSM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	3	3	3	-3	multi-exon	FALSE	canonical	3	44	junction_1	78.0412705515297	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56983662	57035645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_191435_131	chr9	+	5090	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTAACATAAGTCCCT	NA	False	NA	NA	False	AATAAA	-17	NA	56983662	57035643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_191439_10	chr9	+	5109	21	FSM	ENSMUSG00000042557.15	ENSMUST00000168177.8	5086	21	-30	7	-7	-5	multi-exon	FALSE	canonical	3	20	junction_18	80.3800970390059	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTAACATAAGTCCCT	NA	False	NA	NA	False	AATAAA	-17	NA	56983652	57035643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
Isoform_191463_30	chr9	+	3203	26	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	54.0613873295904	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTGCCTTGCTGTTTC	NA	False	NA	20	True	AATAAA	-21	NA	57038055	57049494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_57038174_57038442_57038543_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
Isoform_191466_28	chr9	+	3349	27	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	65.9648911460129	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038052	57049491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043486_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
Isoform_191467_655	chr9	+	3228	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	82	510	2	-1	multi-exon	FALSE	canonical	2	160	junction_17	33.744593641056	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTGCCTTGCTGTTTCTC	NA	False	NA	22	True	AATAAA	-23	NA	57038055	57049496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
Isoform_191468_9	chr9	+	3305	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	-1	516	-1	-1	multi-exon	FALSE	canonical	2	160	junction_17	33.744593641056	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57037972	57049490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
Isoform_191477_2334	chr9	+	679	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	-36	2	-31	-2	multi-exon	FALSE	canonical	3	7868	junction_4	746.021908190369	2334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGTCTTGTGATGTT	341	False	NA	20	True	AATAAA	-20	NA	57428525	57439707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
Isoform_191478_39	chr9	+	720	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	-76	1	-71	-1	multi-exon	FALSE	canonical	3	7868	junction_4	746.021908190369	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTCTTGTGATGTTG	301	False	NA	21	True	AATAAA	-21	NA	57428485	57439708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
Isoform_191485_33	chr9	+	2973	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	44	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_4	22.8582589013249	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	False	NA	14	True	AATAAA	-14	NA	57444889	57450467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
Isoform_191486_23	chr9	+	3042	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	-25	0	10	0	multi-exon	FALSE	canonical	0	0	junction_4	22.8582589013249	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	False	NA	14	True	AATAAA	-14	NA	57444820	57450467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
Isoform_191493_21	chr9	+	3000	4	FSM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	3	-2	3	0	multi-exon	FALSE	canonical	3	38	junction_3	8.73053390247253	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	False	NA	14	True	AATAAA	-14	NA	57444813	57450467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57447937
Isoform_191497_15	chr9	+	2453	10	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	104.968190360958	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGCCCTGATGTCAAT	NA	False	NA	13	True	AATAAA	-15	NA	57468241	57496078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_57468394_57484475_57484545_57484921_57485021_57485556_57485686_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
Isoform_191499_379	chr9	+	2325	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	15	0	0	0	multi-exon	TRUE	canonical	3	243	junction_4	15.3927742788621	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGCCCTGATGTCAAT	NA	False	NA	13	True	AATAAA	-15	NA	57468240	57496078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
Isoform_191501_9	chr9	+	2805	16	FSM	ENSMUSG00000032308.10	ENSMUST00000053230.7	2826	16	17	4	17	-4	multi-exon	FALSE	canonical	3	37	junction_2	6.816320284598	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGCATTTCTTCTTGCC	NA	False	NA	29	True	ATTAAA	-13	NA	57496751	57503512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225
Isoform_191505_642	chr9	+	3349	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	23	2336	-4	-1240	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	NA	False	NA	16	True	AATAAA	-26	NA	57615845	57657446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
Isoform_191508_10	chr9	+	3922	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	39	1747	12	-651	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCTTGGGTCCAATCTG	NA	False	NA	NA	False	AAGAAA	-28	NA	57615861	57658035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
Isoform_191510_10	chr9	+	5685	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	23	0	-4	0	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGACTCCAACTGATTCT	NA	False	NA	NA	False	GATAAA	-16	NA	57615845	57659782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
Isoform_191514_54	chr9	+	3027	6	FSM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	8	1242	-4	-1242	multi-exon	FALSE	canonical	3	26	junction_2	95.7613700820952	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCTTCCTAGAGTGAAG	NA	False	NA	14	True	AATAAA	-24	NA	57615845	57657444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57651867_57652086_57655443
Isoform_191518_25	chr9	+	1421	12	NIC	ENSMUSG00000055720.11	novel	1319	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	95.5400482857649	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818268	57837251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_57818291_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_191519_59	chr9	+	1313	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216925.2	1319	11	8	-2	1	2	multi-exon	FALSE	canonical	3	39	junction_1	82.3315856764583	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGTCCAGTGCTTGGC	NA	False	NA	18	True	AATATA	-19	NA	57818269	57837253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57818291_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_191520_12	chr9	+	1429	12	NNC	ENSMUSG00000055720.11	novel	1319	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	96.9895623591094	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818267	57837251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_57818291_57818992_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_191521_89	chr9	+	1459	12	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	84.997131696865	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGTCCAGTGCTTGGC	NA	False	NA	18	True	AATATA	-19	NA	57818284	57837253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_57818343_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_191523_155	chr9	+	1347	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	19	-2	-3	2	multi-exon	FALSE	canonical	3	118	junction_1	59.3140792729686	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGTCCAGTGCTTGGC	NA	False	NA	18	True	AATATA	-19	NA	57818287	57837253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_191524_6	chr9	+	1526	12	NIC	ENSMUSG00000055720.11	novel	1426	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	95.7810002035894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818327	57837251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_57818455_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_191525_7	chr9	+	1416	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	11	-1	-6	1	multi-exon	FALSE	canonical	3	19	junction_1	88.2161549830869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCGTGTCCAGTGCTT	NA	False	NA	15	True	AATATA	-16	NA	57818327	57837250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57818455_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_191526_7	chr9	+	1471	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	-47	2	1	-2	multi-exon	FALSE	canonical	3	19	junction_1	88.2161549830869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTGCCGTGTCCAGTG	NA	False	NA	12	True	AATATA	-13	NA	57818269	57837247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57818455_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_191527_5	chr9	+	2111	11	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	54.7233039938197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818287	57837251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_191530_33	chr9	+	3298	14	FSM	ENSMUSG00000038264.9	ENSMUST00000043059.9	3297	14	-1	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	2.43495258328376	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGTGCCCTGTCT	NA	False	NA	11	True	AATAAA	-16	NA	57847394	57870148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57847612_57860818_57860962_57861452_57861495_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
Isoform_191532_12	chr9	+	2723	18	ISM	ENSMUSG00000032327.15	ENSMUST00000167479.8	2871	19	397	-8	252	8	3prime_fragment	TRUE	canonical	1	1	junction_1	1.92416790985837	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAAGCTAATCTGAGCTC	NA	False	NA	NA	False	NA	NA	NA	58042344	58061287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_58042486_58046262_58046330_58046638_58046725_58047696_58047837_58048141_58048166_58048338_58048506_58050197_58050321_58052743_58052812_58052995_58053076_58053280_58053343_58054744_58054908_58056462_58056539_58057360_58057495_58058443_58058562_58058645_58058748_58059161_58059326_58059727_58059884_58060435
Isoform_191533_4	chr9	+	2070	8	NIC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	150.498220207796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	11	True	AATAAA	-22	NA	58160518	58169803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_58160561_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_191534_4	chr9	+	2116	8	NIC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	150.498220207796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGGAGAAGTGCAGCT	NA	False	NA	6	True	AATAAA	-17	NA	58160467	58169798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_58160561_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_191535_21	chr9	+	1792	7	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	44	2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	122.45498038962	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGCAGCTGGCTGTG	NA	False	NA	13	True	AATAAA	-24	NA	58160518	58169805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_58160561_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_191536_13	chr9	+	1844	7	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	122.45498038962	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAGAAGTGCAGCTGG	NA	False	NA	8	True	AATAAA	-19	NA	58160461	58169800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_58160561_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_191537_31	chr9	+	2191	8	FSM	ENSMUSG00000032333.7	ENSMUST00000216877.2	2236	8	44	1	44	-1	multi-exon	FALSE	canonical	3	65	junction_3	134.059079269902	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGAAGTGCAGCTGGCT	NA	False	NA	10	True	AATAAA	-21	NA	58160518	58169802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_58160683_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_191538_4	chr9	+	2243	8	FSM	ENSMUSG00000032333.7	ENSMUST00000216877.2	2236	8	-8	1	0	-1	multi-exon	FALSE	canonical	3	65	junction_3	134.059079269902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGAAGTGCAGCTGGCT	NA	False	NA	10	True	AATAAA	-21	NA	58160466	58169802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_58160683_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_191540_249	chr9	+	1909	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	72	3	44	-3	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAGAAGTGCAGCTGG	NA	False	NA	8	True	AATAAA	-19	NA	58160518	58169800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_191541_23	chr9	+	1962	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	21	1	1	-1	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGAAGTGCAGCTGGCT	NA	False	NA	10	True	AATAAA	-21	NA	58160467	58169802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_191543_9	chr9	+	3439	6	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	46	-5	intron_retention	FALSE	canonical	3	282	junction_1	36.1861852092757	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGGAGAAGTGCAGCT	NA	False	NA	6	True	AATAAA	-17	NA	58160520	58169798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_191546_12	chr9	+	866	3	FSM	ENSMUSG00000097651.3	ENSMUST00000181967.3	843	3	-28	5	-28	-5	multi-exon	FALSE	canonical	3	39	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAACTGTGGCTGATAC	NA	False	NA	11	True	NA	NA	NA	58362376	58376913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_58362640_58374083_58374201_58376427
Isoform_191548_14	chr9	+	1952	2	FSM	ENSMUSG00000066607.6	ENSMUST00000217624.2	1095	2	-870	13	-511	-13	multi-exon	FALSE	canonical	3	17	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAGTGTGCAATGCTA	NA	False	NA	NA	False	AGTAAA	-13	NA	58395374	58397755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_58396523_58396951
Isoform_191550_44	chr9	+	2646	3	FSM	ENSMUSG00000066607.6	ENSMUST00000085658.5	2139	3	-470	-37	-470	-1	multi-exon	FALSE	canonical	0	0	junction_2	8.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCCGGGGCCCACAGGC	NA	False	NA	NA	False	AATAAA	-16	NA	58395415	58407062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_58396523_58396951_58397676_58406247
Isoform_191553_13	chr9	+	1927	8	FSM	ENSMUSG00000032336.18	ENSMUST00000176896.8	841	8	-170	-916	-21	0	multi-exon	FALSE	canonical	3	20	junction_5	128.573492046933	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	516	False	NA	NA	False	AATAAA	-16	NA	58489553	58560161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58550968_58557779_58557802_58558540_58558616_58559141
Isoform_191554_216	chr9	+	2030	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	-5	-1	-5	1	multi-exon	FALSE	canonical	3	310	junction_5	36.1815151813233	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATAATACTCTTTAT	532	False	NA	NA	False	AATAAA	-17	NA	58489569	58560162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
Isoform_191562_918	chr9	+	2437	7	FSM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	48	-1	23	0	multi-exon	FALSE	canonical	3	305	junction_6	121.65205391699	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198888	59223483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
Isoform_191563_78	chr9	+	2488	7	FSM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	-5	1	-5	-1	multi-exon	FALSE	canonical	3	305	junction_6	121.65205391699	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAAGTCTAATTGATT	NA	False	NA	17	True	ATTAAA	-18	NA	59198835	59223481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
Isoform_191567_899	chr9	+	2433	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	35	-4	24	0	multi-exon	FALSE	canonical	3	314	junction_6	118.522032644662	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198889	59223483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
Isoform_191569_80	chr9	+	2487	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	-19	-4	-5	0	multi-exon	FALSE	canonical	3	314	junction_6	118.522032644662	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198835	59223483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
Isoform_191571_101	chr9	+	2240	6	NIC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	227.97315631451	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198888	59223483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59221035_59221135_59222013
Isoform_191575_63	chr9	+	2272	6	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	226.796825374607	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198853	59223483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59221035_59221135_59222016
Isoform_191581_33	chr9	+	5127	6	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	24	0	intron_retention	FALSE	canonical	3	305	junction_5	131.862655820365	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198889	59223483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59220520_59221035_59221135_59222013
Isoform_191582_40	chr9	+	5124	6	FSM	ENSMUSG00000025236.12	ENSMUST00000214361.2	5148	6	24	0	24	0	multi-exon	FALSE	canonical	3	314	junction_5	128.284059804794	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198889	59223483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59220520_59221035_59221135_59222016
Isoform_191589_2373	chr9	+	1840	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	155	1	155	-1	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	2373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTGCTTGTG	NA	False	NA	31	True	AATAAA	-23	NA	59446977	59472391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
Isoform_191590_43	chr9	+	1932	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	61	3	61	-3	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTTTGGGTTGCTTG	NA	False	NA	29	True	AATAAA	-21	NA	59446883	59472389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
Isoform_191609_4	chr9	+	2489	23	FSM	ENSMUSG00000025237.17	ENSMUST00000216351.2	2484	23	-3	-2	-3	0	multi-exon	FALSE	canonical	0	0	junction_10	14.9016056597828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTGGACTGGATATG	NA	False	NA	13	True	AATAAA	-7	NA	59524640	59557552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538053_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_191610_5	chr9	+	2634	24	FSM	ENSMUSG00000025237.17	ENSMUST00000026267.16	2709	24	58	17	-19	1	multi-exon	FALSE	canonical	3	6	junction_19	14.9962818328102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTGTGGACTGGATAT	NA	False	NA	12	True	AATAAA	-6	NA	59524624	59557551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59549023_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_191612_5	chr9	+	2660	23	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	12.3533546820621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTCTGAC	NA	False	NA	29	True	AATAAA	-23	NA	59524545	59557568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_191613_5	chr9	+	2774	24	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-40	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_19	15.1991194650933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGGATATGATCACTGT	NA	False	NA	21	True	AATAAA	-15	NA	59524526	59557560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59548990_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_191614_4	chr9	+	2486	22	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_18	14.7021833416448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGCTGTGGACTGGAT	NA	False	NA	10	True	AATAAA	-4	NA	59524627	59557549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_191615_4	chr9	+	2744	24	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-36	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_19	16.0266790803349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGATCACTGTGGTC	NA	False	NA	25	True	AATAAA	-19	NA	59524530	59557564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547319_59547433_59548306_59548380_59549023_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_191616_5	chr9	+	2573	23	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_17	13.7732523152247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTGGTCTGACTAGC	NA	False	NA	33	True	AATAAA	-27	NA	59524639	59557572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547319_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_191617_3	chr9	+	2470	23	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-37	-18	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	15.9016216232161	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAAATGGAA	NA	False	NA	-7	True	NA	NA	NA	59524529	59557532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_59524692_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59549023_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_191630_56726	chr9	+	2220	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	209	3	1	-3	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	56726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
Isoform_191631_4693	chr9	+	2254	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	175	3	-30	-3	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	4693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1839	False	NA	17	True	AATAAA	-17	NA	59563825	59586655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
Isoform_19165_12	chr11	+	2934	12	FSM	ENSMUSG00000019368.14	ENSMUST00000019512.8	2956	12	4	18	4	-18	multi-exon	FALSE	canonical	3	10	junction_7	3.13603423830188	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3981786	3998006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
Isoform_19166_71	chr11	+	1903	9	FSM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	-26	-3	-26	3	multi-exon	FALSE	canonical	3	21	junction_6	6.41165930161608	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGTTAAGACATAAATC	7824	False	NA	NA	False	AATAAA	-22	NA	4085175	4091175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4089859_4089934_4090079_4090297_4090401_4090486
Isoform_191671_3	chr9	+	10473	43	FSM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	60	1665	60	-1665	multi-exon	TRUE	canonical	3	21	junction_5	14.12370436335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATTTTTTAATCAT	615	False	NA	NA	False	AATAAA	-34	NA	59658238	59834484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
Isoform_191673_3	chr9	+	10416	42	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	63	-1665	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_25	14.6749431337428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATTTTTTAATCAT	618	False	NA	NA	False	AATAAA	-34	NA	59658241	59834484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782481_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
Isoform_191674_3	chr9	+	2022	3	FSM	ENSMUSG00000034839.6	ENSMUST00000038407.6	2440	3	150	268	150	-268	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGAAGTCCTTTATCTG	NA	False	NA	NA	False	AATAAA	-13	NA	60620421	60645816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_60620689_60631429_60631641_60644272
Isoform_191675_267	chr9	+	4469	19	FSM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	-32	-20	-32	9	multi-exon	FALSE	canonical	3	92	junction_11	29.0464187886294	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTGTGTCACCGAGTT	NA	False	NA	37	True	AATAAA	-38	NA	60701791	60787661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
Isoform_191676_131	chr9	+	4484	19	FSM	ENSMUSG00000034485.11	ENSMUST00000050183.7	4428	19	-63	7	-57	0	multi-exon	FALSE	canonical	3	41	junction_8	35.7857134056402	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACTTTTCTGAGATG	NA	False	NA	21	True	AATAAA	-22	NA	60701766	60787645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
Isoform_19168_5	chr11	+	1971	8	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	-20	1	intron_retention	FALSE	canonical	3	22	junction_1	6.01698276818648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCTGTTAAGACATAAA	7830	False	NA	NA	False	AATAAA	-20	NA	4085181	4091173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4090079_4090297_4090401_4090486
Isoform_191688_14	chr9	+	5130	20	FSM	ENSMUSG00000032280.17	ENSMUST00000034820.16	4646	20	-490	6	2	-5	multi-exon	FALSE	canonical	3	85	junction_13	43.258483548224	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTTGGTTTGATTGT	NA	False	NA	30	True	AATGAA	-30	NA	61279649	61325763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_19169_5	chr11	+	1823	7	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	-27	3	intron_retention	FALSE	canonical	3	4	junction_4	11.8836956466506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGTTAAGACATAAATC	7823	False	NA	NA	False	AATAAA	-22	NA	4085174	4091175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4089738_4090079_4090297_4090401_4090486
Isoform_191690_33	chr9	+	5146	20	FSM	ENSMUSG00000032280.17	ENSMUST00000162583.8	4299	20	-851	4	2	-4	multi-exon	FALSE	canonical	3	95	junction_6	39.4816132387409	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTGGTTTGATTGTT	NA	False	NA	31	True	AATGAA	-31	NA	61279649	61325764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191695_8	chr9	+	5129	20	FSM	ENSMUSG00000032280.17	ENSMUST00000159050.8	2304	20	-1060	-1765	-5	-5	multi-exon	FALSE	canonical	3	64	junction_12	47.5364854771947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTTGGTTTGATTGT	NA	False	NA	30	True	AATGAA	-30	NA	61279659	61325763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191696_23	chr9	+	5160	20	FSM	ENSMUSG00000032280.17	ENSMUST00000162973.8	4114	20	-1049	3	2	0	multi-exon	FALSE	canonical	3	64	junction_12	44.235268765659	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGATTGTTGTGTT	NA	False	NA	36	True	AAAAAG	-1	NA	61279649	61325769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191698_3	chr9	+	5207	20	NNC	ENSMUSG00000032280.17	novel	4114	20	NA	NA	-53	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	59.1526969059445	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGGTTGGTTTGATTG	NA	False	NA	29	True	AATGAA	-29	NA	61279594	61325762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_61280744_61281234_61281336_61281797_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191700_6	chr9	+	5128	20	NIC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	51.1700765223381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTGGTTTGATTGTT	NA	False	NA	31	True	AATGAA	-31	NA	61279649	61325764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191701_10	chr9	+	5131	20	NIC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	48.17437164201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTTGGTTTGATTGT	NA	False	NA	30	True	AATGAA	-30	NA	61279660	61325763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191704_5	chr9	+	5154	20	NIC	ENSMUSG00000032280.17	novel	4114	20	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	52.0018644455867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGGTTGGTTTGATTG	NA	False	NA	29	True	AATGAA	-29	NA	61279645	61325762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191705_4	chr9	+	5150	20	NIC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	52.9521291152616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTTGGTTTGATTGT	NA	False	NA	30	True	AATGAA	-30	NA	61279659	61325763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191706_6	chr9	+	4508	20	NIC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	8	15	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	52.9521291152616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGTCTCCCCTTTCCTGC	NA	False	NA	30	True	AATAAA	-31	NA	61279672	61325134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191707_7	chr9	+	4531	20	NIC	ENSMUSG00000032280.17	novel	3523	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	50.0910528278973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTTGATAAGATACCG	NA	False	NA	15	True	AATAAA	-16	NA	61279649	61325119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191708_7	chr9	+	5172	20	NIC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	50.0910528278973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTGATTGTTGTGTTT	NA	False	NA	37	True	AAAAAG	-2	NA	61279659	61325770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_191709_3	chr9	+	4384	19	NIC	ENSMUSG00000032280.17	novel	4065	19	NA	NA	-39	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	52.9547908743223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTGATTGTTGTGTTT	NA	False	NA	37	True	AAAAAG	-2	NA	61280914	61325770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_19171_779	chr11	+	2973	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	27	1920	22	1202	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTTCATGGAAGCAGTT	NA	False	NA	1	True	ATTAAA	-16	NA	4110376	4130621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
Isoform_191726_95	chr9	+	826	6	ISM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	17	1460	17	45	5prime_fragment	FALSE	canonical	3	492	junction_5	28.7986110776197	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCTGGTGGTATGTCAG	NA	False	NA	NA	False	NA	NA	NA	62248627	62284634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581
Isoform_191728_136	chr9	+	2051	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	51	11	51	-11	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGGGAGATGGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	62248661	62286083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
Isoform_191730_571	chr9	+	1065	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	54	994	54	37	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTATTTCCCCCCCTCC	NA	False	NA	8	True	AATAAA	-19	NA	62248664	62285100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
Isoform_19174_400	chr11	+	3004	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	5	1911	0	1211	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCAGTTTGTCCCTGC	NA	False	NA	10	True	ATTAAA	-25	NA	4110354	4130630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
Isoform_191741_4	chr9	+	2404	8	NIC	ENSMUSG00000032245.13	novel	2142	7	NA	NA	-158	-3	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	23.492942926482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGGCCGTGGCTGTTTC	NA	False	NA	10	True	AATAAA	-18	NA	62745908	62759285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_62746237_62747766_62747874_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
Isoform_191742_8	chr9	+	2267	8	NIC	ENSMUSG00000032245.13	novel	2142	7	NA	NA	-22	-4	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	23.492942926482	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGGCCGTGGCTGTTT	NA	False	NA	9	True	AATAAA	-17	NA	62746044	62759284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_62746237_62747766_62747874_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
Isoform_191743_130	chr9	+	2139	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	0	3	0	-3	multi-exon	FALSE	canonical	3	52	junction_1	5.87130498460285	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGGCCGTGGCTGTTTC	NA	False	NA	10	True	AATAAA	-18	NA	62746066	62759285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
Isoform_191744_19	chr9	+	2256	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	-117	3	-117	-3	multi-exon	FALSE	canonical	3	52	junction_1	5.87130498460285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGGCCGTGGCTGTTTC	NA	False	NA	10	True	AATAAA	-18	NA	62745949	62759285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
Isoform_191746_11	chr9	+	2343	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	-201	0	-201	0	multi-exon	FALSE	canonical	3	52	junction_1	5.87130498460285	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCGTGGCTGTTTCTAG	NA	False	NA	13	True	AATAAA	-21	NA	62745865	62759288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
Isoform_191747_18	chr9	+	772	3	ISM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	10571	5	10541	1	3prime_fragment	FALSE	canonical	3	41	junction_1	28	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTGGAATTGGTGTT	3022	False	NA	4	True	AATAAA	-16	NA	62775956	62783198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_62776100_62778547_62778737_62782758
Isoform_191748_4	chr9	+	592	3	ISM	ENSMUSG00000032246.15	ENSMUST00000215968.2	526	4	10519	-70	10519	70	3prime_fragment	FALSE	canonical	3	41	junction_1	28	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTAATAAGGTCTGTC	3000	False	NA	NA	False	AATAAA	-22	NA	62775934	62782996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_62776100_62778547_62778737_62782758
Isoform_19175_797	chr11	+	2880	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	27	2013	22	1109	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGAGATACTGTGT	NA	False	NA	-20	True	NA	NA	NA	4110376	4130528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
Isoform_191750_5	chr9	+	932	2	ISM	ENSMUSG00000032246.15	ENSMUST00000163820.3	699	4	12842	-2	12829	1	3prime_fragment	FALSE	canonical	3	97	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTGGAATTGGTGTT	5310	False	NA	4	True	AATAAA	-16	NA	62778244	62783198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_62778737_62782758
Isoform_191757_317	chr9	+	2565	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	31	2698	31	1562	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGCTAATGTGTTT	9245	False	NA	NA	False	ATTAAA	-15	NA	63509972	63549172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
Isoform_191762_347	chr9	+	2564	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	31	1564	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	67.8911619914051	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGCTAATGTGTTTTG	9245	False	NA	NA	False	ATTAAA	-17	NA	63509972	63549174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874_63546925_63547488
Isoform_19177_52	chr11	+	4883	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	6	31	1	-31	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATTATGTATAAATTA	NA	False	NA	15	True	ATTAAA	-19	NA	4110355	4132510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
Isoform_191776_21191	chr9	+	1389	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	-1	150	-1	-150	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	21191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
Isoform_19178_61	chr11	+	4877	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	43	0	38	0	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCTCCATTATCCTCATC	NA	False	NA	46	True	TATAAA	-15	NA	4110392	4132541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
Isoform_191780_785	chr9	+	1544	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	-1	-5	-1	5	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTCCACATGGTAGT	NA	False	NA	21	True	AATAAA	-18	NA	64080655	64085953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
Isoform_191820_4	chr9	+	692	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	87	449	87	-449	multi-exon	FALSE	canonical	3	413	junction_2	26	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATATATAAATCAGTTC	1715	False	NA	29	True	AATAAA	-25	NA	64086642	64089965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64086703_64087780_64087871_64089423
Isoform_191823_593	chr9	+	1207	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9570	False	NA	16	True	AATAAA	-16	NA	64188889	64212076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_191834_285	chr9	+	1205	8	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	479	junction_1	696.204344855674	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATTTGAGTTTCTCACC	9570	False	NA	20	True	AATAAA	-20	NA	64188889	64212080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_191842_394	chr9	+	1211	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	1	-1	1	1	multi-exon	FALSE	canonical	3	540	junction_1	675.401679425976	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCAGGATTTGAGTTTC	9570	False	NA	15	True	AATAAA	-15	NA	64188889	64212075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_191849_211	chr9	+	1183	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	27	631	23	1	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCAGGATTTGAGTTTC	9592	False	NA	15	True	AATAAA	-15	NA	64188911	64212075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_191850_44	chr9	+	1228	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	-17	630	1	2	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9548	False	NA	16	True	AATAAA	-16	NA	64188867	64212076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_191851_59	chr9	+	1032	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	4	805	0	-173	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTAGTAAGTCTGTT	9569	False	NA	21	True	AATACA	-24	NA	64188888	64211901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_191862_8	chr9	+	3826	25	NIC	ENSMUSG00000036466.18	novel	6680	25	NA	NA	28	-20	combination_of_known_junctions	FALSE	canonical	2	5	junction_22	7.12378157223317	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTGGTATCAATGTGA	NA	False	NA	NA	False	NA	NA	NA	64292935	64608237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64607644
Isoform_191863_6	chr9	+	3412	25	FSM	ENSMUSG00000036466.18	ENSMUST00000068967.11	6680	25	-3	3271	0	1	multi-exon	FALSE	canonical	2	5	junction_22	6.84348838921594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTCTCACATAACTTA	NA	False	NA	NA	False	AATAAA	-18	NA	64292964	64613216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64613008
Isoform_191865_6	chr9	+	6567	34	FSM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	-9	2087	-9	-1528	multi-exon	FALSE	canonical	3	9	junction_22	5.48643874485172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAACTTATGAAACAAG	NA	False	NA	NA	False	AATATA	-16	NA	64718612	64824862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
Isoform_191866_5	chr9	+	8374	34	FSM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	-9	280	-9	-17	multi-exon	FALSE	canonical	3	9	junction_22	5.48643874485172	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTAAGACTCTTACT	NA	False	NA	NA	False	AATAAA	-16	NA	64718612	64826669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
Isoform_191867_354	chr9	+	2483	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	9	328	9	-58	multi-exon	FALSE	canonical	3	115	junction_1	33.6860505254029	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAAATGGTGTTTTGAT	NA	False	NA	NA	False	ATTAAA	-30	NA	64868195	64893932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
Isoform_191868_35	chr9	+	2562	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-68	326	-68	-56	multi-exon	TRUE	canonical	3	115	junction_1	33.6860505254029	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGGTGTTTTGATCT	NA	False	NA	NA	False	ATTAAA	-32	NA	64868118	64893934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
Isoform_191869_10	chr9	+	2579	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-19	260	-19	10	multi-exon	FALSE	canonical	3	115	junction_1	33.6860505254029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCAATGTCTCTCGGG	NA	False	NA	NA	False	AATATA	-28	NA	64868167	64894000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
Isoform_191870_18	chr9	+	2810	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	9	1	9	-1	multi-exon	FALSE	canonical	3	115	junction_1	33.6860505254029	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTAGGATTTTGACTG	NA	False	NA	NA	False	ATTAAA	-16	NA	64868195	64894259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
Isoform_191872_51	chr9	+	2786	13	FSM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	-5	56	-5	-56	multi-exon	FALSE	canonical	3	19	junction_1	58.8451357377991	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGGTGTTTTGATCT	NA	False	NA	NA	False	ATTAAA	-32	NA	64868213	64893934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64868540_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
Isoform_191885_3	chr9	+	2867	19	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	27	4427	27	-2638	5prime_fragment	FALSE	canonical	3	89	junction_17	13.1182889956289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTTCCTCAGTACT	NA	False	NA	NA	False	ATTAAA	-27	NA	64939722	64985506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244
Isoform_191886_91	chr9	+	4783	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	27	-2	27	2	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTCCCCCATGACTT	NA	False	NA	33	True	ATTAAA	-30	NA	64939722	64989935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
Isoform_191891_23	chr9	+	6646	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	12	-1850	12	1850	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTCAGTGTTCCTT	NA	False	NA	9	True	AATAAA	-16	NA	64939707	64991783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
Isoform_191893_3	chr9	+	7048	20	NIC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	13	2	intron_retention	FALSE	canonical	3	89	junction_16	12.8524548459766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTCCCCCATGACTT	NA	False	NA	33	True	ATTAAA	-30	NA	64939708	64989935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
Isoform_191895_3	chr9	+	3224	3	NNC	ENSMUSG00000032816.16	novel	1131	4	NA	NA	-6	-2196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65008761	65024333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_65008880_65020540_65020895_65021581
Isoform_191896_8	chr9	+	4460	10	ISM	ENSMUSG00000032816.16	ENSMUST00000213533.2	6220	20	26808	3	26759	-3	3prime_fragment	TRUE	canonical	3	6	junction_3	2.94811092476036	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACATGTTGCTCTCTCTC	2797	False	NA	1	True	AATAAA	-9	NA	65035575	65045219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
Isoform_191897_13	chr9	+	4371	10	ISM	ENSMUSG00000032816.16	ENSMUST00000213533.2	6220	20	26901	-1	26852	1	3prime_fragment	FALSE	canonical	3	6	junction_3	2.94811092476036	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGCTCTCTCTCTTTT	2890	False	NA	5	True	AATAAA	-13	NA	65035668	65045223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
Isoform_191903_63	chr9	+	4450	14	FSM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	-110	-1157	-87	1157	multi-exon	FALSE	canonical	3	70	junction_11	14.1668000921899	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGAGGTTTTTTTTTT	NA	False	NA	30	True	AATAAA	-19	NA	65048383	65094311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
Isoform_191909_29	chr9	+	4384	14	FSM	ENSMUSG00000032394.7	ENSMUST00000034961.6	3146	14	-81	-1157	-81	1157	multi-exon	FALSE	canonical	3	39	junction_11	21.5941587543412	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGAGGTTTTTTTTTT	NA	False	NA	30	True	AATAAA	-19	NA	65048389	65094311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
Isoform_191910_43	chr9	+	4299	14	FSM	ENSMUSG00000032394.7	ENSMUST00000034961.6	3146	14	5	-1158	5	1158	multi-exon	FALSE	canonical	3	39	junction_11	21.5941587543412	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGAGGTTTTTTTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	65048475	65094312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
Isoform_191912_37	chr9	+	2496	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	-16	2	-16	-2	multi-exon	FALSE	canonical	3	27	junction_1	17.0269394392142	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCAAGTTGTCTGTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	65121955	65146498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
Isoform_191914_57	chr9	+	2583	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	-73	8	-73	-2	multi-exon	FALSE	canonical	3	51	junction_2	11.7915223783869	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCAAGTTGTCTGTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	65122353	65146498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
Isoform_191922_11	chr9	+	2156	13	ISM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	31	3623	-4	-3623	5prime_fragment	FALSE	canonical	3	317	junction_12	30.2833837827501	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGTGACTCATTTT	6182	False	NA	NA	False	GATAAA	-20	NA	65201572	65234316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063
Isoform_191923_555	chr9	+	2457	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	31	397	-4	-397	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGATCCCATTGTTT	6182	False	NA	19	True	AATAAA	-15	NA	65201572	65237542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
Isoform_191926_15	chr9	+	2857	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	24	4	-11	-4	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTCAATTTGTTTTTT	6175	False	NA	NA	False	AATAAA	-27	NA	65201565	65237935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
Isoform_191930_123	chr9	+	2415	13	FSM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	-4	398	-4	-397	multi-exon	FALSE	canonical	3	55	junction_5	89.4905333292609	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGATCCCATTGTTT	6182	False	NA	19	True	AATAAA	-15	NA	65201572	65237542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
Isoform_191936_661	chr9	+	2404	5	FSM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	15	0	15	0	multi-exon	FALSE	canonical	3	267	junction_1	28.3846349280733	661	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCCCCTGATTTATT	NA	False	NA	42	True	AATAAA	-25	NA	65253400	65266925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65254291_65261891_65262031_65263526_65263764_65263999_65264088_65265875
Isoform_191944_865	chr9	+	1143	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-143	-154	-143	154	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGGTGTAGTGACACA	NA	False	NA	18	True	NA	NA	NA	65278984	65285485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
Isoform_191946_21	chr9	+	3175	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-180	-2149	-180	-179	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTAAAAATAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	65278947	65287480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
Isoform_191949_51	chr9	+	1180	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-180	-154	-180	154	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGGTGTAGTGACACA	NA	False	NA	18	True	NA	NA	NA	65278947	65285485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
Isoform_191955_8	chr9	+	946	4	ISM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-13	11692	-7	-6552	5prime_fragment	FALSE	canonical	3	143	junction_2	18.6607133363712	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAGAGATCAAGACTGGA	NA	False	NA	NA	False	NA	NA	NA	65343056	65348007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627
Isoform_191957_152	chr9	+	1403	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	639	0	-2	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGCTTGTATCCTTTGA	NA	False	NA	25	True	AATAAA	-26	NA	65343063	65359697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
Isoform_191958_4	chr9	+	3175	6	Fusion	ENSMUSG00000111722.2_ENSMUSG00000059183.13	novel	2042	9	NA	NA	0	1796	multi-exon	FALSE	non_canonical	0	0	junction_1	70.7966100883369	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTTCATATCTTCATT	NA	False	NA	NA	False	NA	NA	NA	65343063	65362132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr9_+_65343073_65344297_65344480_65346811_65346935_65347627_65347636_65354505_65354513_65359286
Isoform_191959_129	chr9	+	2031	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	11	0	-11	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAACAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	65343063	65360325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
Isoform_191962_4	chr9	+	2538	8	FSM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	20	5	20	-5	multi-exon	FALSE	canonical	3	114	junction_4	22.2545569743019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGAGCTTGTATCCTT	NA	False	NA	22	True	AATAAA	-23	NA	65343089	65359694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
Isoform_191964_353	chr9	+	1674	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	-11	1017	-11	-1017	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGTGGCTTCTGTGA	7165	False	NA	8	True	AATAAA	-10	NA	65368217	65394735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
Isoform_191965_528	chr9	+	1647	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	19	1014	13	-1014	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	7195	False	NA	11	True	AATAAA	-13	NA	65368247	65394738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
Isoform_191973_6	chr9	+	3348	13	FSM	ENSMUSG00000041064.15	ENSMUST00000134538.9	3395	13	45	2	0	0	multi-exon	FALSE	canonical	2	4	junction_1	37.6787406902088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65494486	65503244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65494534_65494865_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_191974_4	chr9	+	3353	13	FSM	ENSMUSG00000041064.15	ENSMUST00000131483.3	3309	13	-47	3	-8	0	multi-exon	FALSE	canonical	1	4	junction_1	37.6787406902088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494455	65503246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65494534_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_191975_26	chr9	+	3397	13	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	35.6872020322256	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494486	65503246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_65494581_65494865_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_191976_12	chr9	+	3400	13	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	35.8817502360183	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494455	65503246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_191977_28	chr9	+	3369	13	NIC	ENSMUSG00000041064.15	novel	3309	13	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	35.8817502360183	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGCCTCCTGCCTGGTC	NA	False	NA	26	True	AATAAA	-16	NA	65494488	65503248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_191980_5	chr9	+	3723	12	FSM	ENSMUSG00000041064.15	ENSMUST00000154970.9	3725	12	6	-4	6	-1	multi-exon	FALSE	canonical	3	7	junction_6	37.3420641109475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGCCTCCTGCCTGGTC	NA	False	NA	26	True	AATAAA	-16	NA	65494480	65503248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_191981_51	chr9	+	3709	12	FSM	ENSMUSG00000041064.15	ENSMUST00000239405.2	3680	12	-27	-2	-4	0	multi-exon	FALSE	canonical	3	64	junction_6	26.5476337835245	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494459	65503246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_191982_134	chr9	+	3681	12	FSM	ENSMUSG00000041064.15	ENSMUST00000047099.13	3685	12	2	2	2	1	multi-exon	FALSE	canonical	3	64	junction_6	26.5476337835245	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65494488	65503247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_191987_5	chr9	+	3225	4	FSM	ENSMUSG00000041064.15	ENSMUST00000152885.8	2450	4	-31	-744	-8	744	multi-exon	FALSE	canonical	3	99	junction_1	7.34846922834953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494455	65498518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65495677_65496286_65496887_65496994_65497110_65497229
Isoform_191989_13	chr9	+	2701	11	ISM	ENSMUSG00000041064.15	ENSMUST00000131483.3	3309	13	1575	3	1570	0	3prime_fragment	FALSE	canonical	3	64	junction_5	27.7805687486776	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65496077	65503246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_191991_4	chr9	+	3912	2	NIC	ENSMUSG00000041064.15	novel	2450	4	NA	NA	0	744	intron_retention	FALSE	canonical	3	108	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494486	65498518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_65497110_65497229
Isoform_191992_86	chr9	+	1908	9	NIC	ENSMUSG00000032387.16	novel	1803	9	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	514.959813359256	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTGATTTTTGCTT	NA	False	NA	13	True	AATAAA	-13	NA	65536935	65567807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_65537005_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
Isoform_191994_2741	chr9	+	1974	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	14	-1	14	1	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	2741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGATTTTTGCTTCT	NA	False	NA	15	True	AATAAA	-15	NA	65537854	65567809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
Isoform_192009_35	chr9	+	1483	3	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	814.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTGATTTTTGCTT	NA	False	NA	13	True	AATAAA	-13	NA	65537854	65567807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_65538180_65566416_65566487_65566719
Isoform_192020_375	chr9	+	1808	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	2	-3	intron_retention	FALSE	canonical	3	365	junction_4	22.3983816379666	375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGGTCTGTCTTTTTA	4637	False	NA	20	True	AATAAA	-14	NA	65583862	65597579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
Isoform_192024_19	chr9	+	1973	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	126	89	1	-89	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCATGGTTTGACAGACT	NA	False	NA	NA	False	AATAAA	-18	NA	65797644	65810459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
Isoform_192025_131	chr9	+	965	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	78	1145	-5	-1145	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAATCTCTTGTCATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	65797596	65809403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
Isoform_192027_219	chr9	+	916	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	126	1146	1	-1146	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAAATCTCTTGTCATT	NA	False	NA	NA	False	ATTAAA	-17	NA	65797644	65809402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
Isoform_192035_10	chr9	+	7272	15	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	5.25327885948483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGTTTCATTAGCTG	NA	False	NA	27	True	AATAAA	-28	NA	65816268	65952297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_65816451_65828285_65828351_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
Isoform_192037_4	chr9	+	7213	14	FSM	ENSMUSG00000032384.17	ENSMUST00000034949.10	7208	14	-6	1	3	-1	multi-exon	FALSE	canonical	3	5	junction_1	6.58040843321514	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTTTCATTAGCT	NA	False	NA	26	True	AATAAA	-27	NA	65816261	65952296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65816451_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
Isoform_192038_6	chr9	+	7165	13	FSM	ENSMUSG00000032384.17	ENSMUST00000206594.2	2482	13	-108	-4575	3	0	multi-exon	FALSE	canonical	2	3	junction_1	7.24377127070024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGTTTCATTAGCTG	NA	False	NA	27	True	AATAAA	-28	NA	65816261	65952297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65816451_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
Isoform_192039_2013	chr9	+	868	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	21	3	21	-3	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTTGGGTGTGGGCTG	1595	False	NA	13	True	AATAAA	-13	NA	65967533	65973902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
Isoform_192040_235	chr9	+	1016	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	-127	3	-118	-3	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTTGGGTGTGGGCTG	1447	False	NA	13	True	AATAAA	-13	NA	65967385	65973902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
Isoform_192050_435	chr9	+	1091	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	150	-1	150	1	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCACCTTAGGTTTTT	1533	False	NA	18	True	AATAAA	-19	NA	66034042	66046238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
Isoform_192051_362	chr9	+	1177	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	69	-6	69	6	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTAGGTTTTTACTGA	1452	False	NA	23	True	AATAAA	-24	NA	66033961	66046243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
Isoform_192058_15	chr9	+	1752	12	FSM	ENSMUSG00000032380.10	ENSMUST00000034944.9	1772	12	20	0	8	0	multi-exon	TRUE	canonical	0	0	junction_2	2.90340353139478	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGGTGTTTTAGAGCT	4154	False	NA	NA	False	ATTAAA	-17	NA	66065524	66179524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_66065623_66072619_66072718_66127815_66128038_66138994_66139134_66153698_66153829_66157618_66157668_66158356_66158384_66161752_66161906_66162612_66162659_66175960_66176051_66176148_66176233_66178908
Isoform_192060_3	chr9	+	4617	26	ISM	ENSMUSG00000038664.17	ENSMUST00000042824.13	15153	78	121321	1	3226	-1	3prime_fragment	FALSE	canonical	3	17	junction_2	10.6751299757895	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGCCGCTGTTGTTGA	5878	False	NA	7	True	AATAAA	-18	NA	66379128	66416056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
Isoform_192061_3	chr9	+	1632	7	ISM	ENSMUSG00000038664.17	ENSMUST00000042824.13	15153	78	146770	3	741	-3	3prime_fragment	FALSE	canonical	3	33	junction_1	10.2048463432278	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGGGCCGCTGTTGTT	NA	False	NA	5	True	AATAAA	-16	NA	66404577	66416054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
Isoform_192062_10	chr9	+	3664	10	FSM	ENSMUSG00000032373.16	ENSMUST00000085420.12	3639	10	-22	-3	-19	0	multi-exon	FALSE	canonical	2	4	junction_7	4.2687494916219	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATTTTTTCCCCCCCT	NA	False	NA	NA	False	AATAAA	-17	NA	66620989	66674127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_66621216_66624841_66624863_66653751_66653932_66654857_66655004_66658211_66658308_66659224_66659289_66659568_66659727_66660976_66661104_66670528_66670617_66671569
Isoform_192066_68	chr9	+	579	5	FSM	ENSMUSG00000036781.14	ENSMUST00000127896.8	575	5	-5	1	0	1	multi-exon	FALSE	canonical	3	168	junction_3	5596.89320069626	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTCCTCCCTCTGCTTC	NA	False	NA	31	True	AATAAA	-15	NA	66853367	66856795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855920_66856000_66856610
Isoform_192067_4094	chr9	+	470	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	32	-3	27	1	multi-exon	FALSE	canonical	3	10808	junction_3	618.277355956765	4094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCCTCCCTCTGCTTCTC	NA	False	NA	33	True	AATAAA	-17	NA	66853399	66856797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
Isoform_192073_19	chr9	+	1335	2	FSM	ENSMUSG00000091956.3	ENSMUST00000171652.3	1327	2	-8	0	-8	0	multi-exon	FALSE	canonical	3	27	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTGCAGCATTGATGT	NA	False	NA	NA	False	AATAAA	-22	NA	67666710	67668212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_67666799_67666965
Isoform_192074_146	chr9	+	4104	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	17	48	0	-48	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTGTCATTTCA	4669	False	NA	21	True	AATAAA	-15	NA	69305204	69340356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
Isoform_192077_7	chr9	+	4242	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	17	-90	0	90	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTCTAAAGAAGTGGC	4669	False	NA	6	True	TATAAA	-17	NA	69305204	69340494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
Isoform_192079_4	chr9	+	3978	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	1	-48	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	33.0834597060593	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTGTCATTTCA	4653	False	NA	21	True	AATAAA	-15	NA	69305188	69340356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_69305336_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
Isoform_192080_7	chr9	+	3824	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	2	11	junction_1	42.3416618300535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTGTTCTTTAGA	4707	False	NA	69	True	AATACA	-21	NA	69305242	69340404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_69305336_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
Isoform_192081_131	chr9	+	1362	13	FSM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	77	8	-19	-8	multi-exon	FALSE	canonical	3	66	junction_7	12.0908022893437	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGAATGCCGTTGCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	69360978	69399069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
Isoform_192084_26	chr9	+	2388	11	FSM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	15	61	15	1	multi-exon	FALSE	canonical	3	26	junction_9	104.017354321286	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGTCTTAATTACCTT	NA	False	NA	18	True	AATAAA	-18	NA	69896762	69915538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
Isoform_192087_417	chr9	+	2353	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	-25	0	13	0	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896760	69915537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
Isoform_192091_14	chr9	+	2390	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	-61	-1	-23	1	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGTCTTAATTACCTT	NA	False	NA	18	True	AATAAA	-18	NA	69896724	69915538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
Isoform_192094_9	chr9	+	3599	9	NIC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	-3	1	intron_retention	FALSE	canonical	3	219	junction_8	27.3404462289846	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGTCTTAATTACCTT	NA	False	NA	18	True	AATAAA	-18	NA	69896782	69915538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69910748_69910850_69910950_69914345
Isoform_192096_16	chr9	+	920	6	NIC	ENSMUSG00000033543.18	novel	1199	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	366.992098007573	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919846	69930020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_69919944_69922573_69922693_69923049_69923220_69924100_69924206_69926670_69926798_69929718
Isoform_192099_15	chr9	+	883	6	FSM	ENSMUSG00000033543.18	ENSMUST00000116552.8	888	6	5	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	405.059798054559	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919852	69930020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69925961_69926101_69926670_69926798_69929718
Isoform_192100_544	chr9	+	750	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	15	128	0	0	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919846	69930020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
Isoform_192103_33	chr9	+	1012	5	NIC	ENSMUSG00000033543.18	novel	1199	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_3	356.599477705731	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919852	69930020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_69919944_69922573_69922693_69924100_69924474_69926670_69926798_69929718
Isoform_192108_646	chr9	+	4640	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	-16	1	2	-1	multi-exon	FALSE	canonical	3	179	junction_9	20.3906969292862	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGTTTCTTCATGAC	NA	False	NA	19	True	AATAAA	-19	NA	70114633	70307047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
Isoform_192109_16	chr9	+	5196	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	-16	-555	2	555	multi-exon	FALSE	canonical	3	179	junction_9	20.3906969292862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAGATGAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	70114633	70307603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
Isoform_19212_729	chr11	+	1921	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	3	-3	3	0	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	1585	False	NA	24	True	AATAAA	-15	NA	4136824	4165505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
Isoform_192129_167	chr9	+	3772	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	-79	-2	-3	0	multi-exon	FALSE	canonical	3	132	junction_6	54.986612006924	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTAATGTATTGAGAAC	NA	False	NA	17	True	AATAAA	-18	NA	70450072	70499516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
Isoform_192130_36	chr9	+	3819	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	-121	-7	-5	5	multi-exon	FALSE	canonical	3	132	junction_6	54.986612006924	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTATTGAGAACCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	70450030	70499521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
Isoform_192132_108	chr9	+	3716	21	FSM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	37	2	-3	0	multi-exon	FALSE	canonical	3	66	junction_6	63.2220491600834	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	70450072	70499514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
Isoform_192136_18	chr9	+	3306	20	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-3	3	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	70.7250930092244	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70450072	70499519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
Isoform_192137_13	chr9	+	3338	20	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	70.7250930092244	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70450040	70499519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
Isoform_192145_618	chr9	+	4609	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	-18	2	-18	-2	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	4932	False	NA	12	True	AATAAA	-17	NA	70586260	70687509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
Isoform_192146_23	chr9	+	4724	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	-133	2	-133	-2	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	4817	False	NA	12	True	AATAAA	-17	NA	70586145	70687509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
Isoform_19215_24	chr11	+	2458	8	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	291	junction_7	26.8639808924097	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	1585	False	NA	24	True	AATAAA	-15	NA	4136824	4165505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
Isoform_192150_9	chr9	+	4448	15	NIC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-12	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	71.582583960979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAACTTGAGGTCTATGC	4938	False	NA	8	True	AATAAA	-13	NA	70586266	70687505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_70586542_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
Isoform_192161_15	chr9	+	2264	14	FSM	ENSMUSG00000013584.6	ENSMUST00000034723.6	2264	14	-2	2	-2	-2	multi-exon	FALSE	canonical	2	4	junction_1	2.4973358585766	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGACTGTTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	71123068	71203523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_71123246_71159879_71159985_71160197_71160339_71162315_71162446_71169012_71169075_71171068_71171198_71171314_71171429_71188885_71188989_71190659_71190845_71192135_71192301_71192397_71192556_71193201_71193277_71200887_71200977_71202892
Isoform_192162_11	chr9	+	4348	22	FSM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	32	7	4	-7	multi-exon	FALSE	canonical	3	36	junction_20	11.1161666503221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCAGATTCCTGTTTGG	NA	False	NA	13	True	AATAAA	-22	NA	72182192	72271052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
Isoform_192165_13	chr9	+	4284	22	FSM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	99	4	-1	-4	multi-exon	FALSE	canonical	3	36	junction_20	11.1161666503221	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGATTCCTGTTTGGCTA	NA	False	NA	16	True	AATAAA	-25	NA	72182259	72271055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
Isoform_192166_13	chr9	+	4330	21	FSM	ENSMUSG00000038535.18	ENSMUST00000183410.8	4200	21	-120	-10	5	-6	multi-exon	FALSE	canonical	3	22	junction_19	12.0883208097734	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGATTCCTGTTTGGC	NA	False	NA	14	True	AATAAA	-23	NA	72182165	72271053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
Isoform_192169_8	chr9	+	4511	23	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.2417761386937	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTTGGCTAGCC	NA	False	NA	19	True	AATAAA	-28	NA	72182180	72271058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
Isoform_192170_8	chr9	+	4401	23	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.2417761386937	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTTGGCTAGCCT	NA	False	NA	20	True	AATAAA	-29	NA	72182291	72271059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
Isoform_192172_3	chr9	+	4427	22	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.1571848773849	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGATTCCTGTTTGGC	NA	False	NA	14	True	AATAAA	-23	NA	72182213	72271053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
Isoform_192174_4	chr9	+	2005	11	NNC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	-10	-3451	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.7927228926065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCAGAATTAGTCATTT	NA	False	NA	3	True	ATTAAA	-15	NA	72345282	72365856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_72345397_72345724_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
Isoform_192176_28	chr9	+	1809	10	FSM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	-9	3450	0	-3450	multi-exon	FALSE	canonical	3	40	junction_2	21.6834692682276	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAGAATTAGTCATTTT	NA	False	NA	4	True	ATTAAA	-16	NA	72345807	72365857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
Isoform_192178_5	chr9	+	5216	10	FSM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	33	1	33	-1	multi-exon	FALSE	canonical	3	40	junction_2	21.6834692682276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACATTGTTCTTTATAT	NA	False	NA	NA	False	AATAAA	-18	NA	72345849	72369306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
Isoform_192179_8	chr9	+	1203	7	NIC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	42	-3450	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	33.4535332795938	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAGAATTAGTCATTTT	NA	False	NA	4	True	ATTAAA	-16	NA	72345858	72365857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72359862_72360121_72364059_72364186_72365594
Isoform_192180_39	chr9	+	867	3	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	13826	3450	13826	-3450	3prime_fragment	FALSE	canonical	3	85	junction_1	11.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAGAATTAGTCATTTT	1866	False	NA	4	True	ATTAAA	-16	NA	72359642	72365857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_72360121_72364059_72364186_72365594
Isoform_192181_7	chr9	+	4314	3	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	13826	3	13826	-3	3prime_fragment	FALSE	canonical	3	85	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAACATTGTTCTTTAT	1866	False	NA	NA	False	AATAAA	-16	NA	72359642	72369304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_72360121_72364059_72364186_72365594
Isoform_192182_38	chr9	+	1814	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-358	1	8	-1	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTGATTACCTGGTTT	688	False	NA	8	True	AATAAA	-17	NA	72439532	72519704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
Isoform_192184_5	chr9	+	1673	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-384	168	-15	-168	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACCTTTTTTATAGCTG	662	False	NA	NA	False	AATAAA	-18	NA	72439506	72519537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
Isoform_192185_4	chr9	+	1995	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-539	1	-170	-1	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTGATTACCTGGTTT	507	False	NA	8	True	AATAAA	-17	NA	72439351	72519704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
Isoform_192186_43	chr9	+	5059	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	17	-2641	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTGGGTCTTTATTTT	697	False	NA	8	True	AGTAAA	-21	NA	72439541	72527470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
Isoform_192187_8	chr9	+	5227	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-152	-2645	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCAGTCTGGGTCTTTA	525	False	NA	4	True	AGTAAA	-17	NA	72439369	72527466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
Isoform_192188_32	chr9	+	7727	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-13	-6	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTGGATGTTAAGAT	664	False	NA	NA	False	ATTAAA	-15	NA	72439508	72530105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
Isoform_192189_7	chr9	+	7916	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-199	-3	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGGATGTTAAGATAAT	478	False	NA	NA	False	ATTAAA	-18	NA	72439322	72530108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
Isoform_192191_6	chr9	+	1820	8	NNC	ENSMUSG00000037674.16	novel	1457	8	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	65.8461410085229	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGACTGATTACCTGGT	683	False	NA	6	True	AATAAA	-15	NA	72439527	72519702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_72439940_72440096_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
Isoform_192192_6	chr9	+	5098	10	NNC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-16	-2641	intron_retention	FALSE	canonical	3	23	junction_1	67.8802504051195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTGGGTCTTTATTTT	661	False	NA	8	True	AGTAAA	-21	NA	72439505	72527470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_72439940_72440096_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
Isoform_192193_15	chr9	+	1980	7	FSM	ENSMUSG00000037674.16	ENSMUST00000184015.2	1554	7	-490	64	2	-1	multi-exon	FALSE	canonical	3	175	junction_3	16.2933183305987	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTGATTACCTGGTTT	682	False	NA	8	True	AATAAA	-17	NA	72439526	72519704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
Isoform_192194_4	chr9	+	1931	7	FSM	ENSMUSG00000037674.16	ENSMUST00000184015.2	1554	7	-513	136	-18	-73	multi-exon	FALSE	canonical	3	175	junction_3	16.2933183305987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTAAAATTATGTGC	659	False	NA	-64	True	NA	NA	NA	72439503	72519632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
Isoform_192195_25	chr9	+	5224	9	FSM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	10	2646	7	-2646	multi-exon	FALSE	canonical	3	93	junction_7	49.9699909945959	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCAGTCTGGGTCTTT	687	False	NA	3	True	AGTAAA	-16	NA	72439531	72527465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
Isoform_192196_12	chr9	+	7863	9	FSM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	11	6	8	-6	multi-exon	FALSE	canonical	3	93	junction_7	49.9699909945959	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTGGATGTTAAGAT	688	False	NA	NA	False	ATTAAA	-15	NA	72439532	72530105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
Isoform_1922_19	chr10	-	1395	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	-3	-96	-3	-85	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGAAGTGCCTTTATCC	6554	False	NA	0	True	NA	NA	NA	40123035	40099326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
Isoform_19220_154	chr11	+	1569	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	5	0	5	0	multi-exon	FALSE	canonical	3	115	junction_3	11.4229757506527	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	7123	False	NA	17	True	AATAAA	-25	NA	4168229	4172409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
Isoform_192206_4967	chr9	+	5386	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	103	10	11	-10	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	4967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569730	72657124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
Isoform_192215_88	chr9	+	5539	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	-50	10	-50	-10	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569577	72657124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
Isoform_19222_4	chr11	+	1722	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	-148	0	-148	0	multi-exon	FALSE	canonical	3	115	junction_3	11.4229757506527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	6970	False	NA	17	True	AATAAA	-25	NA	4168076	4172409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
Isoform_19223_121	chr11	+	2272	3	FSM	ENSMUSG00000058755.4	ENSMUST00000075221.3	2272	3	-2	2	-2	-2	multi-exon	FALSE	canonical	3	46	junction_2	1.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTGTCAGTCTTTT	8291	False	NA	3	True	TTTAAA	-16	NA	4186417	4191024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4186914_4188405_4188543_4189385
Isoform_19224_12	chr11	+	2540	3	FSM	ENSMUSG00000058755.4	ENSMUST00000075221.3	2272	3	-269	1	-269	-1	multi-exon	TRUE	canonical	3	46	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGTCAGTCTTTTA	8024	False	NA	4	True	TTTAAA	-17	NA	4186150	4191025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4186914_4188405_4188543_4189385
Isoform_19227_12	chr11	+	2146	2	FSM	ENSMUSG00000058755.4	ENSMUST00000131764.2	773	2	-14	-1359	-14	-3	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGGTGTCAGTCTTT	8279	False	NA	2	True	TTTAAA	-15	NA	4186405	4191023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4186914_4189385
Isoform_192276_3	chr9	+	8996	20	FSM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	91	61	91	-61	multi-exon	FALSE	canonical	3	13	junction_7	6.01935934968244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTGCTGTCTACATAT	NA	False	NA	NA	False	AATAAA	-24	NA	72714246	72824512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72714815_72716736_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
Isoform_192277_4	chr9	+	8746	20	FSM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	402	0	402	0	multi-exon	FALSE	canonical	3	13	junction_7	6.01935934968244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	72714557	72824573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72714815_72716736_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
Isoform_192278_5	chr9	+	7623	20	FSM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	442	1083	442	-1083	multi-exon	FALSE	canonical	3	13	junction_7	6.01935934968244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCCTGGGCTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	72714597	72823490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72714815_72716736_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
Isoform_19228_11	chr11	+	3836	3	FSM	ENSMUSG00000034394.15	ENSMUST00000040750.4	3798	3	-38	0	-38	0	multi-exon	FALSE	canonical	3	7	junction_1	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTGGAGTGCATTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	4217056	4222514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4217120_4218183_4218366_4218923
Isoform_192280_4	chr9	+	2325	3	FSM	ENSMUSG00000034910.6	ENSMUST00000038489.6	7916	3	-574	6165	-574	-6165	multi-exon	FALSE	canonical	2	7	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACACAAAAGCCTCTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	72832352	72853298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72833243_72850201_72850288_72851949
Isoform_192281_8	chr9	+	1929	9	FSM	ENSMUSG00000092192.8	ENSMUST00000034734.9	1975	9	46	0	46	0	multi-exon	FALSE	canonical	3	12	junction_2	4.44233891097922	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCTGAAAACCTTATT	9224	False	NA	NA	False	AATAAA	-15	NA	72866112	72880346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72866280_72867863_72868012_72868539_72868674_72869196_72869423_72871372_72871519_72872450_72872561_72876313_72876468_72879254_72879361_72879608
Isoform_192282_16	chr9	+	1694	9	FSM	ENSMUSG00000092192.8	ENSMUST00000034734.9	1975	9	46	235	46	-232	multi-exon	FALSE	canonical	3	12	junction_2	4.44233891097922	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATTGGCTTTGGTATA	9224	False	NA	NA	False	ATTAAA	-17	NA	72866112	72880111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72866280_72867863_72868012_72868539_72868674_72869196_72869423_72871372_72871519_72872450_72872561_72876313_72876468_72879254_72879361_72879608
Isoform_192283_235	chr9	+	2930	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	2	7	2	0	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGAGACTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	72892861	72921213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
Isoform_192284_24	chr9	+	4996	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-3	-2054	-3	-8	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAAGGTCTCTCTCAA	NA	False	NA	NA	False	AATAAA	-15	NA	72892856	72923274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
Isoform_192285_88	chr9	+	2959	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-26	6	-26	1	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGAGACTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	72892833	72921214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
Isoform_192289_10	chr9	+	2649	9	FSM	ENSMUSG00000034563.17	ENSMUST00000037977.15	3151	9	151	351	2	-11	multi-exon	FALSE	canonical	1	1	junction_8	60.1040764008565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTAAAGGTCTCTCT	NA	False	NA	NA	False	AATAAA	-12	NA	72892861	72923271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920275_72922613
Isoform_19229_6	chr11	+	4136	3	FSM	ENSMUSG00000034394.15	ENSMUST00000040750.4	3798	3	-338	0	-39	0	multi-exon	FALSE	canonical	3	7	junction_1	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTGGAGTGCATTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	4216756	4222514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4217120_4218183_4218366_4218923
Isoform_192292_48	chr9	+	3013	9	FSM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	-53	9	-26	-9	multi-exon	FALSE	canonical	3	41	junction_8	47.1963981676568	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAAAGGTCTCTCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	72892833	72923273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613
Isoform_192293_16	chr9	+	2909	10	FSM	ENSMUSG00000034563.17	ENSMUST00000140675.8	2839	10	-68	-2	33	0	multi-exon	FALSE	canonical	3	12	junction_9	64.8245495335079	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGAGTTGCCAATTACG	NA	False	NA	7	True	AATAAA	-31	NA	72892818	72923622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613_72922712_72923179
Isoform_192295_134	chr9	+	478	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	13	5	1	-5	multi-exon	FALSE	canonical	3	439	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATCTAAGTTATTTATA	NA	False	NA	NA	False	AATAAA	-14	NA	72947012	72950056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72947148_72949713
Isoform_192297_7	chr9	+	3055	6	FSM	ENSMUSG00000032202.12	ENSMUST00000034722.5	2979	6	-41	-35	-38	-2	multi-exon	FALSE	canonical	2	4	junction_1	3.86781592116274	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTGGTGAATATTTCA	NA	False	NA	NA	False	NA	NA	NA	72952097	73004909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72952294_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
Isoform_192299_171	chr9	+	1625	3	FSM	ENSMUSG00000092622.9	ENSMUST00000034737.13	1681	3	60	-4	-52	4	multi-exon	FALSE	canonical	3	216	junction_2	18.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGTGTATTTGAATGG	NA	False	NA	30	True	AATAAA	-17	NA	73009739	73011724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_73009958_73010111_73010292_73010497
Isoform_192305_35	chr9	+	1173	4	FSM	ENSMUSG00000092622.9	ENSMUST00000173734.9	1228	4	60	-5	-52	5	multi-exon	FALSE	canonical	3	51	junction_3	87.8116671569837	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTATTTGAATGGA	NA	False	NA	31	True	AATAAA	-18	NA	73009739	73011725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_73009958_73010111_73010292_73010497_73011172_73011624
Isoform_192306_12	chr9	+	1084	4	NNC	ENSMUSG00000092622.9	novel	1228	4	NA	NA	10	5	intron_retention	FALSE	non_canonical	0	0	junction_1	92.1845974119321	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTATTTGAATGGA	NA	False	NA	31	True	AATAAA	-18	NA	73009689	73011725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_73009912_73010204_73010292_73010497_73011172_73011624
Isoform_192308_15	chr9	+	3170	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	-27	-1600	-5	1600	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATTTTTGCATT	8553	False	NA	NA	False	CATAAA	-13	NA	73020702	73032215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
Isoform_19231_130	chr11	+	2691	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	-42	1	-42	-1	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGTGACATGCTCCA	NA	False	NA	7	True	AATAAA	-19	NA	4587704	4633384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
Isoform_192310_711	chr9	+	1518	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	25	0	25	0	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	8605	False	NA	13	True	AATAAA	-18	NA	73020754	73030615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
Isoform_192316_4	chr18	+	473	1	FSM	ENSMUSG00000053740.9	ENSMUST00000066378.9	492	1	-33	52	-33	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGTCCAGCAGTTAC	NA	False	NA	NA	False	NA	NA	NA	14703170	14703643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_14703200_14703600
Isoform_192317_26	chr9	+	3117	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	25	-1599	25	1599	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTATTTTTGCAT	8605	False	NA	NA	False	CATAAA	-12	NA	73020754	73032214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
Isoform_19232_534	chr11	+	2645	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	4	1	4	-1	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGTGACATGCTCCA	NA	False	NA	7	True	AATAAA	-19	NA	4587750	4633384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
Isoform_192324_5	chr9	+	3912	13	FSM	ENSMUSG00000034858.17	ENSMUST00000170846.8	4355	13	59	384	40	-1	multi-exon	FALSE	canonical	2	6	junction_4	2.59673940848048	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGGTGTGTTTTA	NA	False	NA	NA	False	AATATA	-15	NA	74860393	74939366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_74860561_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
Isoform_19233_92	chr11	+	4960	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	4	-2314	4	0	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587750	4635699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
Isoform_192331_250	chr9	+	3886	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	76	1	11	-1	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGTTTTGTCTTATT	NA	False	NA	19	True	AATAAA	-29	NA	74944971	74967594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
Isoform_192333_759	chr9	+	397	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	76	3471	11	1	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944971	74964105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
Isoform_19234_29	chr11	+	5002	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	-38	-2314	-38	0	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587708	4635699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
Isoform_192342_31	chr9	+	3890	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	13	-3474	11	-1	multi-exon	FALSE	canonical	3	608	junction_1	2500.61556865949	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGTTTTGTCTTATT	NA	False	NA	19	True	AATAAA	-29	NA	74944971	74967594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
Isoform_192343_74	chr9	+	401	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	13	15	11	1	multi-exon	FALSE	canonical	3	608	junction_1	2500.61556865949	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944971	74964105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
Isoform_192349_52	chr9	+	4039	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	6	1	6	-1	multi-exon	FALSE	canonical	3	5814	junction_2	96	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGTTTTGTCTTATT	NA	False	NA	19	True	AATAAA	-29	NA	74945005	74967594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_74945244_74959514_74959638_74963916
Isoform_192351_142	chr9	+	550	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	6	3490	6	1	multi-exon	FALSE	canonical	3	5814	junction_2	96	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74945005	74964105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_74945244_74959514_74959638_74963916
Isoform_192361_7	chr9	+	6579	41	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	3	14	junction_31	15.7384084328753	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAACTGGCCAAGTAACT	2320	False	NA	5	True	AATAAA	-13	NA	74978456	75125762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
Isoform_192363_10	chr9	+	7520	40	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-26	530	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	11.688258408137	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGCCTGAATGTCCT	2307	False	NA	21	True	ATTAAA	-23	NA	74978443	75126765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
Isoform_192364_23	chr9	+	6514	40	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	11.688258408137	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGGCCAAGTAACTTC	2312	False	NA	7	True	AATAAA	-15	NA	74978448	75125764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
Isoform_192365_10	chr9	+	7151	40	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-40	524	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	11.688258408137	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTTATTGAAGCCTGAA	2670	False	NA	15	True	ATTAAA	-17	NA	74978806	75126759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
Isoform_192366_3	chr9	+	6423	39	NIC	ENSMUSG00000034593.17	novel	6480	40	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	15.1526169539792	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGGCCAAGTAACTTC	2322	False	NA	7	True	AATAAA	-15	NA	74978458	75125764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
Isoform_192368_13	chr9	+	1612	10	ISM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	37	47020	5	65	5prime_fragment	FALSE	canonical	3	35	junction_4	9.15302014516399	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCTTAGCCAGCAAAA	5165	False	NA	NA	False	AATAAA	-20	NA	75139338	75165713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240
Isoform_192369_20	chr9	+	6687	41	FSM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	38	2	6	-2	multi-exon	FALSE	canonical	3	15	junction_20	11.0181384543851	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATGCACCATTTTTT	5166	False	NA	6	True	AATAAA	-16	NA	75139339	75212731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
Isoform_192370_4	chr9	+	6743	41	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_31	11.9167686475823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGATGCACCATTTTT	5130	False	NA	5	True	AATAAA	-15	NA	75139303	75212730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196319_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
Isoform_192374_6	chr9	+	3163	12	FSM	ENSMUSG00000033590.9	ENSMUST00000215620.2	3189	12	24	2	24	-2	multi-exon	FALSE	canonical	3	30	junction_2	7.22140985754018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATGCACCATTTTTT	1741	False	NA	6	True	AATAAA	-16	NA	75195136	75212731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
Isoform_192375_20	chr9	+	2108	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	3	-6	-2	1	multi-exon	TRUE	canonical	3	15	junction_6	3.38230690505755	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTATCTTGTCTTTATT	378	False	NA	7	True	NA	NA	NA	75221420	75253159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
Isoform_192381_586	chr9	+	2176	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	3	1	3	-1	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCTATGCTTAAGAAAA	929	False	NA	4	True	AATAAA	-13	NA	75348820	75373713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
Isoform_192386_11	chr9	+	3460	11	NIC	ENSMUSG00000042487.7	novel	2180	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	353	junction_2	50.3250434674427	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCTATGCTTAAGAAAA	927	False	NA	4	True	AATAAA	-13	NA	75348818	75373713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75364476_75365356_75365544_75368287_75368386_75373475
Isoform_19239_12	chr11	+	753	6	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	4	-31954	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	127.679912280672	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGAATTATTTATTT	NA	False	NA	NA	False	AATAAA	-35	NA	4587750	4601431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4601308
Isoform_192392_11	chr9	+	2588	5	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-41	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	17.0953209972788	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTTTATGTGTGTGCA	NA	False	NA	14	True	AATAAA	-19	NA	75375856	75393961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_75375966_75386953_75387087_75388729_75388947_75390380_75390480_75391931
Isoform_192393_60	chr9	+	2456	4	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-41	-1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	3.2659863237109	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTTTATGTGTGTGCAT	NA	False	NA	15	True	AATAAA	-20	NA	75375856	75393962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_75375966_75388729_75388947_75390380_75390480_75391931
Isoform_192395_10	chr9	+	2448	4	NNC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	14.9740516301441	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTTTATGTGTGTGCAT	NA	False	NA	15	True	AATAAA	-20	NA	75375868	75393962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_75375966_75388729_75388947_75390380_75390484_75391931
Isoform_192396_3	chr9	+	3174	10	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-41	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.7807014651697	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTTTATGTGTGTGCA	NA	False	NA	14	True	AATAAA	-19	NA	75375856	75393961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_75375966_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
Isoform_192397_3	chr9	+	2282	3	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-42	-8607	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAAGTGTAGTTTATCT	NA	False	NA	NA	False	AATAAA	-13	NA	75375855	75380291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_75375966_75377587_75379554_75380085
Isoform_1924_10	chr10	-	1170	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	4	-50	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	393.075374451262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCCAGCTCTCACTGT	6595	False	NA	-8	True	TTTAAA	-28	NA	40122994	40099472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120580_40120714_40122948
Isoform_192400_42	chr9	+	1200	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	61	junction_2	3	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCATTTCTCTTATT	NA	False	NA	7	True	AATAAA	-17	NA	75533011	75545053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_75533320_75542667_75543000_75544493
Isoform_192401_3	chr9	+	1512	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	-20	-303	-20	303	multi-exon	FALSE	canonical	3	61	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATCTTGCCATTTATT	NA	False	NA	NA	False	TTTAAA	-22	NA	75533002	75545356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_75533320_75542667_75543000_75544493
Isoform_192403_355	chr9	+	3419	16	FSM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	2	2	2	-2	multi-exon	FALSE	canonical	3	228	junction_1	20.3437131976114	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAGTACGTGTATGAGT	4422	False	NA	16	True	AATAAA	-43	NA	77661818	77701765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
Isoform_192414_1530	chr9	+	2760	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	19	3	19	-3	multi-exon	FALSE	canonical	3	515	junction_6	44.3764048354804	1530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77824664	77891798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
Isoform_192427_11	chr9	+	3055	14	FSM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	-514	-1	-514	1	multi-exon	FALSE	canonical	2	4	junction_1	29.6118879054586	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGGTCTCATTATTTT	NA	False	NA	4	True	TATAAA	-15	NA	78015959	78075221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_192429_319	chr9	+	2421	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-27	4166	4	3	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGTCTCATTATTTTCT	NA	False	NA	6	True	TATAAA	-17	NA	78020569	78075223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_192430_65	chr9	+	2450	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-58	4168	16	1	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGGTCTCATTATTTT	NA	False	NA	4	True	TATAAA	-15	NA	78020538	78075221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_192431_11	chr9	+	2477	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	19	4064	19	105	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTGTTCATTGTTC	NA	False	NA	NA	False	AATGAA	-17	NA	78020615	78075325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_192432_12	chr9	+	2512	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-120	4168	-46	1	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGGTCTCATTATTTT	NA	False	NA	4	True	TATAAA	-15	NA	78020476	78075221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_192433_8	chr9	+	6577	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-19	2	-4	-2	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACATTGACTAGAATTT	NA	False	NA	NA	False	AATAAA	-11	NA	78020577	78079387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_192435_5	chr9	+	2268	13	NIC	ENSMUSG00000009828.16	novel	6560	14	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	30.9931668096193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCGGGTCTCATTATT	NA	False	NA	2	True	TATAAA	-13	NA	78020585	78075219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_192437_3	chr9	+	2398	2	ISM	ENSMUSG00000097574.3	ENSMUST00000180974.2	1444	4	34	-1	34	1	intron_retention	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGGGATTTCTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	78083229	78086162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_78083318_78083852
Isoform_192438_9	chr9	+	1421	4	FSM	ENSMUSG00000097574.3	ENSMUST00000180974.2	1444	4	25	-2	25	2	multi-exon	FALSE	canonical	3	12	junction_1	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	78083220	78086163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78083318_78083852_78084025_78084280_78084376_78085106
Isoform_192439_4	chr9	+	2213	2	NIC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	26	4	intron_retention	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATTTCTTTTTTCT	NA	False	NA	7	True	AATAAA	-18	NA	78083221	78086165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_78084376_78085106
Isoform_192441_2711	chr9	+	902	7	FSM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	69	6	69	-6	multi-exon	FALSE	canonical	3	2717	junction_1	326.320735201155	2711	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTCTCGTTGGAGAG	NA	False	NA	11	True	ATTAAA	-10	NA	78099297	78116625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
Isoform_192452_5	chr9	+	1123	4	ISM	ENSMUSG00000070291.5	ENSMUST00000113367.2	2207	17	-1	20649	-1	-20649	5prime_fragment	FALSE	canonical	3	88	junction_3	5.71547606649408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAAAAGAGTTGTTTTT	9041	False	NA	NA	False	NA	NA	NA	78303057	78310220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631
Isoform_192457_26	chr9	+	2209	17	FSM	ENSMUSG00000070291.5	ENSMUST00000113367.2	2207	17	-1	-1	-1	1	multi-exon	FALSE	canonical	3	26	junction_4	22.7904002542737	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTGAAATTTTTTAT	9041	False	NA	3	True	AATAAA	-14	NA	78303057	78330870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
Isoform_192458_16	chr9	+	2117	16	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	19.8422668955832	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9050	False	NA	2	True	AATAAA	-13	NA	78303066	78330869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
Isoform_192459_4	chr9	+	3132	14	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	-1	1	intron_retention	FALSE	canonical	3	37	junction_4	20.2241872884744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTGAAATTTTTTAT	9041	False	NA	3	True	AATAAA	-14	NA	78303057	78330870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78319594_78320247_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
Isoform_192460_5	chr9	+	3857	13	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	32	0	intron_retention	FALSE	canonical	3	37	junction_4	17.6704005488148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9074	False	NA	2	True	AATAAA	-13	NA	78303090	78330869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
Isoform_192461_268	chr9	+	2357	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	3	6	-2	-6	multi-exon	FALSE	canonical	3	57	junction_9	10.2457409010559	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTGTTGTTAGGTGAT	NA	False	NA	13	True	AATAAA	-12	NA	78355492	78381428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
Isoform_192463_7	chr9	+	2367	12	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	21.4734123514762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTGTTGTTAGGTGAT	NA	False	NA	13	True	AATAAA	-12	NA	78355493	78381428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368103_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
Isoform_192464_5	chr9	+	2034	11	FSM	ENSMUSG00000032342.14	ENSMUST00000148238.2	2076	11	33	9	28	-9	multi-exon	FALSE	canonical	1	5	junction_3	25.1477633200251	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATACTGTTGTTAGGT	NA	False	NA	10	True	AATAAA	-9	NA	78355522	78381425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
Isoform_192473_240	chr9	+	4299	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-541	-263	16	1	multi-exon	FALSE	canonical	0	0	junction_3	90.822246885334	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTAATTTGATATTCT	NA	False	NA	5	True	AATAAA	-16	NA	79974233	80051451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
Isoform_19248_98	chr11	+	787	6	FSM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	5	0	5	0	multi-exon	FALSE	canonical	3	156	junction_1	205.698225563567	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654682	4687669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
Isoform_192480_25	chr9	+	4315	23	FSM	ENSMUSG00000034252.15	ENSMUST00000037484.15	5111	23	12	784	12	1	multi-exon	FALSE	canonical	0	0	junction_3	105.987768279143	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTAATTTGATATTCT	NA	False	NA	5	True	AATAAA	-16	NA	79974196	80051451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
Isoform_192485_14	chr9	+	4283	23	FSM	ENSMUSG00000034252.15	ENSMUST00000175999.8	4706	23	-184	607	12	3	multi-exon	FALSE	canonical	3	24	junction_2	83.8945126703669	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTGATATTCTTTAGT	NA	False	NA	10	True	AATAAA	-21	NA	79974196	80051456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
Isoform_192492_59	chr9	+	4183	22	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-7	11	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	64.7191035033447	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTTAGTGAACTTGC	NA	False	NA	18	True	AATAAA	-29	NA	79974210	80051464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
Isoform_192498_29	chr9	+	4115	21	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	86.9113916584011	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974246	80051453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
Isoform_1925_14	chr10	-	986	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	2	20	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	393.075374451262	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTGTTGCTTATTTG	6593	False	NA	16	True	ACTAAA	-38	NA	40122996	40099658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120580_40120714_40122948
Isoform_192511_3	chr9	+	1089	9	ISM	ENSMUSG00000033577.19	ENSMUST00000184480.8	4139	36	-207	61500	-11	-20074	5prime_fragment	FALSE	canonical	3	64	junction_5	7.68114574786861	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTTCTTCGTCCTAAAA	4843	False	NA	NA	False	AATAAA	-19	NA	80072301	80153879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676
Isoform_192515_14	chr9	+	5562	33	NIC	ENSMUSG00000033577.19	novel	7927	35	NA	NA	-10	796	combination_of_known_junctions	TRUE	canonical	3	6	junction_28	17.6442437054553	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTTGATTGGTGTCTTT	4844	False	NA	24	True	AATAAA	-27	NA	80072302	80216680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80203924_80203964_80206427_80206532_80207816_80207949_80214241_80214461_80214953
Isoform_192516_129	chr9	+	5518	32	NIC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	-10	791	combination_of_known_junctions	FALSE	canonical	3	51	junction_13	8.67484072490656	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTCACTTTTGATTGGTG	4844	False	NA	19	True	AATAAA	-22	NA	80072302	80216675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
Isoform_192519_15	chr9	+	689	2	FSM	ENSMUSG00000079225.4	ENSMUST00000055820.7	638	2	-57	6	-57	-6	multi-exon	FALSE	canonical	3	2455	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81559593	81560724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_81559913_81560354
Isoform_192520_33	chr9	+	2063	5	FSM	ENSMUSG00000043289.13	ENSMUST00000057067.10	2670	5	39	568	0	0	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACTGGTTGAATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	81745761	81908511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
Isoform_192521_3	chr9	+	1461	5	FSM	ENSMUSG00000043289.13	ENSMUST00000057067.10	2670	5	-6	1215	-6	-647	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGCTTCAGTATTTCTC	NA	False	NA	NA	False	AATGAA	-36	NA	81745716	81907864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
Isoform_192524_6	chr9	+	4679	5	FSM	ENSMUSG00000103536.2_ENSMUSG00000043289.13	ENSMUST00000057067.10	2670	5	21	-2030	-14	-127	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGTTGCCTGGCT	NA	False	NA	NA	False	NA	NA	NA	81745743	81911109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
Isoform_192526_22	chr9	+	1699	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	460	-1	194	1	multi-exon	FALSE	canonical	3	114	junction_3	13.589211407093	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGATGTTGATCTCTGT	NA	False	NA	5	True	NA	NA	NA	82712052	82729741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
Isoform_192527_57	chr9	+	1087	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	459	612	193	55	multi-exon	FALSE	canonical	3	114	junction_3	13.589211407093	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTGAATTTTTACTTC	NA	False	NA	NA	False	AATAAA	-19	NA	82712051	82729128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
Isoform_192531_3	chr9	+	1276	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	260	622	-6	45	multi-exon	TRUE	canonical	3	114	junction_3	13.589211407093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCCGCTCATACTGAA	NA	False	NA	NA	False	AATAAA	-9	NA	82711852	82729118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
Isoform_192534_3	chr9	+	1902	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	264	-8	-2	8	multi-exon	FALSE	canonical	3	114	junction_3	13.589211407093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGATCTCTGTGGTCTTT	NA	False	NA	12	True	NA	NA	NA	82711856	82729748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
Isoform_192535_6	chr9	+	1031	3	FSM	ENSMUSG00000032251.13	ENSMUST00000034783.6	1159	3	203	-75	203	75	multi-exon	FALSE	canonical	1	5	junction_1	54.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAACAGGTTGTCATGTC	NA	False	NA	NA	False	AATAAA	-39	NA	82712061	82729148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_82712393_82728351_82728483_82728579
Isoform_192536_132	chr9	+	4562	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	1	2	0	-2	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTTTTATTTTTCCT	NA	False	NA	7	True	AATAAA	-14	NA	83430381	83483397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
Isoform_192537_205	chr9	+	3507	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	1	1057	0	-1057	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGAGTTGTTTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	83430381	83482342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
Isoform_192538_4	chr9	+	6241	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	24	-1700	2	1700	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83430404	83485099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
Isoform_192540_4	chr9	+	4988	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	1	-424	0	424	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATTCCTTTGTCAAACTT	NA	False	NA	NA	False	NA	NA	NA	83430381	83483823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
Isoform_192541_6	chr9	+	3305	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-29	1289	-28	-1289	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGGCTTTTTATGTTT	NA	False	NA	NA	False	AATATA	-24	NA	83430351	83482110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
Isoform_192545_13	chr9	+	2744	21	FSM	ENSMUSG00000038379.16	ENSMUST00000188445.7	2711	21	-32	-1	-32	1	multi-exon	FALSE	canonical	3	211	junction_10	27.9819584732735	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTCTCGACAACATTC	NA	False	NA	1	True	AATAAA	-16	NA	83716709	83751547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235
Isoform_192546_380	chr9	+	2890	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	-22	3	6	-3	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTACAGTGGTCAGTT	NA	False	NA	7	True	AATAAA	-18	NA	83716748	83754436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
Isoform_192549_6	chr9	+	2832	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	-61	100	-32	-100	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTCTGTAAATCTGCT	NA	False	NA	13	True	ATTAAA	-25	NA	83716709	83754339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
Isoform_192554_12	chr9	+	3023	3	ISM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	1	167796	1	-167755	5prime_fragment	FALSE	canonical	3	668	junction_1	14	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	83807198	83838496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_83807413_83834576_83834655_83835765
Isoform_192555_666	chr9	+	1473	11	FSM	ENSMUSG00000032263.15	ENSMUST00000034801.11	1472	11	0	-1	0	0	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTGTGTGTGTCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	83807202	84006293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
Isoform_192561_481	chr9	+	2418	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	8	1055	8	-1055	multi-exon	FALSE	canonical	3	125	junction_1	0	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCATGTTGTGTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	85724925	85728038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_85725009_85725703
Isoform_192562_18	chr9	+	3488	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	8	-15	8	15	multi-exon	FALSE	canonical	3	125	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCTTTGCAGATGACTG	NA	False	NA	NA	False	AATAAA	-45	NA	85724925	85729108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_85725009_85725703
Isoform_192564_51	chr9	+	2476	2	FSM	ENSMUSG00000035274.14	ENSMUST00000185559.2	409	2	-7	-2060	-7	-1055	multi-exon	FALSE	canonical	3	15	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCATGTTGTGTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	85725406	85728038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_85725548_85725703
Isoform_192566_4	chr9	+	7836	37	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	4.02423215588321	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGGTCTCAAGCCTCA	NA	False	NA	15	True	AATACA	-20	NA	86349234	86436680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
Isoform_192567_41	chr9	+	1215	3	FSM	ENSMUSG00000032417.11	ENSMUST00000185566.7	1054	3	5	-166	5	0	multi-exon	FALSE	canonical	3	38	junction_1	7	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTGTCTCAAGTCCAA	NA	False	NA	6	True	AATAAA	-19	NA	86454048	86456952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_86454111_86454889_86455117_86456026
Isoform_192569_33	chr9	+	3424	2	FSM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	0	20	0	-20	multi-exon	FALSE	canonical	3	21	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTAAAGAATAAAAAGTA	NA	False	NA	-16	True	NA	NA	NA	86625701	86640476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_86625860_86637210
Isoform_19257_1557	chr11	+	1879	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	48	-1	0	1	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	1557	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGGTGTTGTCTTCAT	NA	False	NA	12	True	ATTAAA	-12	NA	4823998	4844201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
Isoform_192577_525	chr9	+	2218	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	33	393	33	0	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904099	86959434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
Isoform_192579_26	chr9	+	2275	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	33	336	33	57	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTTACATACTGTTT	NA	False	NA	68	True	AATACA	-19	NA	86904099	86959491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
Isoform_192584_31	chr9	+	2251	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	56	337	-17	56	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTATTTACATACTGTT	NA	False	NA	67	True	AATACA	-18	NA	86904122	86959490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
Isoform_192586_14	chr9	+	2028	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	3	36	junction_14	224.417534056136	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCTGTGGTGGACGTG	NA	False	NA	9	True	AATAAA	-20	NA	86904122	86959432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86958880
Isoform_192596_3	chr9	+	1276	6	NIC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	16	668	intron_retention	FALSE	canonical	3	12	junction_1	4.17612260356422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTGTATTGTAGAGC	NA	False	NA	NA	False	AATAGA	-21	NA	88430112	88450904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_88430562_88434714_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
Isoform_192597_3	chr9	+	3404	6	FSM	ENSMUSG00000032425.16	ENSMUST00000162827.8	3472	6	55	13	-10	-13	multi-exon	FALSE	canonical	3	7	junction_1	5.88557558782486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATCCACTTCAG	NA	False	NA	NA	False	NA	NA	NA	88430127	88453101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_88430562_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
Isoform_192598_48	chr9	+	771	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	25	20	25	-6	multi-exon	FALSE	canonical	3	175	junction_1	109	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	89093234	89122273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_89093365_89097261_89097524_89121894
Isoform_192599_3	chr9	+	2783	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	17	-1984	17	1984	multi-exon	TRUE	canonical	3	175	junction_1	109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTTTGGTAATAATGA	NA	False	NA	NA	False	NA	NA	NA	89093226	89124277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_89093365_89097261_89097524_89121894
Isoform_1926_20	chr10	-	2542	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	-6	-1649	-6	2	multi-exon	FALSE	canonical	3	216	junction_5	179.465205541353	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTTGATGGTTGCATC	8575	False	NA	-29	True	AATAAA	-17	NA	40133678	40123696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
Isoform_192601_31	chr9	+	726	3	NIC	ENSMUSG00000066442.18	novel	1406	4	NA	NA	-3	-6	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	155	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	89093449	89122273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_89093535_89097261_89097524_89121894
Isoform_192602_3	chr9	+	927	5	NNC	ENSMUSG00000066442.18	novel	705	4	NA	NA	30	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	164.475492095327	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	89093493	89122273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_89093535_89095134_89095310_89096464_89096535_89097261_89097524_89121894
Isoform_192604_6	chr9	+	5229	25	FSM	ENSMUSG00000032363.16	ENSMUST00000147250.8	4833	25	-286	-110	-153	0	multi-exon	FALSE	canonical	2	9	junction_18	7.86065713255295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTTTGGCCTTGTCTT	NA	False	NA	5	True	CATAAA	-19	NA	90044968	90082153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90075919_90076095_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
Isoform_192606_3	chr9	+	5383	24	FSM	ENSMUSG00000032363.16	ENSMUST00000113060.3	5098	24	-289	4	-132	1	multi-exon	FALSE	canonical	2	9	junction_18	7.51406997818433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGGTTTGGCCTTGTC	NA	False	NA	3	True	CATAAA	-17	NA	90044989	90082151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
Isoform_192607_330	chr9	+	1489	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	513	300	-79	1	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTTGATGTTACTTTA	NA	False	NA	NA	False	NA	NA	NA	92132315	92154031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
Isoform_192608_120	chr9	+	1550	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	452	300	-140	1	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTTGATGTTACTTTA	NA	False	NA	NA	False	NA	NA	NA	92132254	92154031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
Isoform_192615_5	chr9	+	3668	20	FSM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	0	-5	0	-3	multi-exon	FALSE	canonical	2	5	junction_13	23.4907891420283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGTGCCTCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	92424316	92490478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92484037_92484101_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
Isoform_192618_66	chr9	+	3601	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	41	7	0	1	multi-exon	TRUE	canonical	3	58	junction_10	9.44264688775947	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACATTGTGCCTCTC	NA	False	NA	NA	False	NA	NA	NA	92424316	92490474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
Isoform_192624_21	chr9	+	1965	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	-73	2546	-73	867	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAGCCAGATAACCTT	8302	False	NA	NA	False	AATAAA	-17	NA	95519580	95577603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_192626_513	chr9	+	1752	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	138	2548	138	865	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8513	False	NA	NA	False	AATAAA	-15	NA	95519791	95577601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_192627_10	chr9	+	2073	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	-183	2548	-183	865	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8192	False	NA	NA	False	AATAAA	-15	NA	95519470	95577601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_192628_23	chr9	+	1863	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	27	2548	27	865	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8402	False	NA	NA	False	AATAAA	-15	NA	95519680	95577601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_192632_69	chr9	+	1835	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	55	2548	55	865	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8430	False	NA	NA	False	AATAAA	-15	NA	95519708	95577601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_192639_6	chr9	+	5146	28	ISM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	43	40939	1	4353	5prime_fragment	FALSE	canonical	3	80	junction_14	14.9254204491194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGTTCTTTTTATTGA	NA	False	NA	NA	False	AATAAA	-19	NA	95739692	95792758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531
Isoform_192640_70	chr9	+	8002	47	FSM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	56	-2	-2	2	multi-exon	TRUE	canonical	3	80	junction_14	23.1390654868948	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATCTGAAATCCA	NA	False	NA	11	True	AATAAA	-17	NA	95739705	95833699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
Isoform_192643_3	chr9	+	7794	46	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	6	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	28.1851024479245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATATATTAGTAATCTG	NA	False	NA	4	True	AATAAA	-10	NA	95739727	95833692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
Isoform_192649_8	chr9	+	2462	20	NNC	ENSMUSG00000032410.14	novel	3357	21	NA	NA	-15	-2047	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	13.4753288469939	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCATGAGGACGTG	NA	False	NA	NA	False	GATAAA	-45	NA	95836797	95880400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873242_95873341_95877152_95877257_95880268
Isoform_192650_30	chr9	+	3488	27	ISM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	34	41159	1	3	5prime_fragment	FALSE	canonical	3	35	junction_24	7.47273149365955	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAAAATTTCTTTCTT	NA	False	NA	NA	False	AATATA	-38	NA	95836846	95893921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576
Isoform_192652_5	chr9	+	10260	42	FSM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	-7	3	0	-3	multi-exon	TRUE	canonical	3	17	junction_40	10.3589359987776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACACTGCTGCTTTGCTTG	NA	False	NA	22	True	ATTAAA	-22	NA	95836812	95939853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
Isoform_192654_3	chr9	+	10231	42	FSM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	37	-4769	4	-7	multi-exon	FALSE	canonical	3	16	junction_37	10.9955915670048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACGACACTGCTGCTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	95836849	95939849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
Isoform_192661_40	chr9	+	7197	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	26	-4408	13	-10	multi-exon	FALSE	canonical	3	48	junction_1	8.15843122174846	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAGAAATACTTTTCAT	NA	False	NA	7	True	AATAAA	-17	NA	96001440	96066651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
Isoform_192662_4	chr9	+	7184	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	-5	-4364	-5	-54	multi-exon	FALSE	canonical	3	48	junction_1	8.15843122174846	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCATTTTATAGGTCT	NA	False	NA	-37	True	ATTAAA	-18	NA	96001409	96066607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
Isoform_192663_3	chr9	+	7306	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	-52	-4439	-52	21	multi-exon	FALSE	canonical	3	48	junction_1	8.15843122174846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACATTCTTTTTT	NA	False	NA	38	True	ATTAAA	-42	NA	96001362	96066682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
Isoform_192664_3	chr9	+	7052	14	NIC	ENSMUSG00000041440.19	novel	2506	16	NA	NA	1	-10	intron_retention	FALSE	canonical	0	0	junction_1	19.7490169031031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAGAAATACTTTTCAT	NA	False	NA	7	True	AATAAA	-17	NA	96001415	96066651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96001666_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
Isoform_192665_9	chr9	+	2802	15	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	128.768440327938	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078348	96201033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192666_4	chr9	+	2775	14	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	142.640401091937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACTCAATATTCAGTG	NA	False	NA	0	True	NA	NA	NA	96078327	96201030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192667_9	chr9	+	2772	14	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	3	86	junction_8	113.611608707632	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACTCAATATTCAGTG	NA	False	NA	0	True	NA	NA	NA	96078339	96201030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192672_8	chr9	+	2867	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	-41	-1113	-8	0	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078348	96201137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192673_26	chr9	+	1782	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	-42	-27	-9	27	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCTCATATGTGTCT	NA	False	NA	21	True	AATAAA	-27	NA	96078347	96200051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192675_12	chr9	+	2764	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	-41	-1010	-8	0	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078348	96201034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192676_9	chr9	+	1771	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-10	31	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	114.876352609616	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCATATGTGTCTTTAG	NA	False	NA	25	True	AATAAA	-31	NA	96078317	96200055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192677_4	chr9	+	2751	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	114.876352609616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078316	96201034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192679_27	chr9	+	1739	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	32	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATATGTGTCTTTAGT	NA	False	NA	26	True	AATAAA	-32	NA	96078347	96200056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192680_18	chr9	+	2716	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078348	96201034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192683_4	chr9	+	2671	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCTTTTCCATATT	NA	False	NA	-72	True	NA	NA	NA	96078317	96200958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192684_4	chr9	+	2701	13	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	132.410635482535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATATTCAGTGTTTTT	NA	False	NA	5	True	NA	NA	NA	96078348	96201035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192685_7	chr9	+	1719	13	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-8	29	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	132.410635482535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTCATATGTGTCTTT	NA	False	NA	23	True	AATAAA	-29	NA	96078348	96200053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192686_6	chr9	+	1711	13	FSM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	-8	5651	-8	24	multi-exon	FALSE	canonical	3	58	junction_3	115.436009209528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGATGCTCATATGTG	NA	False	NA	18	True	AATAAA	-24	NA	96078348	96200048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192691_4	chr9	+	2677	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	135.43129757791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTCAGTGTTTTTG	NA	False	NA	6	True	NA	NA	NA	96078325	96201036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192694_19	chr9	+	2645	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	115.371408864896	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACTCAATATTCAGTG	NA	False	NA	0	True	NA	NA	NA	96078348	96201030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192699_7	chr9	+	2682	13	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.273029455764	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078324	96201033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_1927_96	chr10	-	716	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	-6	177	-6	-3	multi-exon	FALSE	canonical	3	216	junction_5	179.465205541353	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGTCTTGTATGCA	8575	False	NA	-19	True	AAAACA	-18	NA	40133678	40125522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
Isoform_192700_9	chr9	+	1663	13	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-5	17	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.273029455764	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAATATTTGATGCTC	NA	False	NA	11	True	AATAAA	-17	NA	96078351	96200041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192705_9	chr9	+	1625	12	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-5	27	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.720956553214	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCTCATATGTGTCT	NA	False	NA	21	True	AATAAA	-27	NA	96078351	96200051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192706_4	chr9	+	1565	11	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-9	30	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	125.478284973935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTCATATGTGTCTTTA	NA	False	NA	24	True	AATAAA	-30	NA	96078347	96200054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_96078614_96084183_96084242_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192707_11	chr9	+	1880	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-14	27	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	140.903655027114	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCTCATATGTGTCT	NA	False	NA	21	True	AATAAA	-27	NA	96078313	96200051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192708_11	chr9	+	2830	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	140.903655027114	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTCAGTGTTTTTG	NA	False	NA	6	True	NA	NA	NA	96078348	96201036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192710_11	chr9	+	2815	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	133.535613227333	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACTCAATATTCAGTG	NA	False	NA	0	True	NA	NA	NA	96078354	96201030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192712_4	chr9	+	2971	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	133.535613227333	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078305	96201137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192716_7	chr9	+	1822	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-12	22	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	136.809789004102	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTGATGCTCATATG	NA	False	NA	16	True	AATAAA	-22	NA	96078315	96200046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192717_6	chr9	+	2804	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	136.809789004102	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACTCAATATTCAGTG	NA	False	NA	0	True	NA	NA	NA	96078317	96201030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192721_7	chr9	+	1773	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	24	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	148.102694652276	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGATGCTCATATGTG	NA	False	NA	18	True	AATAAA	-24	NA	96078347	96200048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192722_4	chr9	+	2880	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	148.102694652276	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTATGGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	96078333	96201141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_192725_4	chr9	+	2126	5	NIC	ENSMUSG00000032456.14	novel	2166	5	NA	NA	0	-16	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	2.27760839478607	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTAATGAAAAGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	98178656	98293471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_98179034_98236074_98236218_98281508_98281693_98285586_98285667_98292129
Isoform_192726_87	chr9	+	716	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1910	26	1910	-26	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATGTGTTTTGGAGGA	4795	False	NA	15	True	AATAAA	-16	NA	98306923	98328602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
Isoform_192727_19	chr9	+	815	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1811	26	1811	-26	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATGTGTTTTGGAGGA	4696	False	NA	15	True	AATAAA	-16	NA	98306824	98328602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
Isoform_192732_2039	chr9	+	3050	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	-2	2	-2	-2	multi-exon	TRUE	canonical	3	669	junction_10	53.4673910412871	2039	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTCTTGAGTTTCCTTC	NA	False	NA	17	True	CATAAA	-18	NA	98445781	98470433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
Isoform_192757_9	chr9	+	1045	6	FSM	ENSMUSG00000032463.11	ENSMUST00000112911.9	803	6	28	-270	1	-2	multi-exon	FALSE	canonical	3	19	junction_1	126.927695953247	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGGGTTTGGTTTCA	3573	False	NA	7	True	AATAAA	-21	NA	98868454	98884072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_98868566_98872967_98873025_98874153_98874287_98874565_98874795_98881019_98881070_98883607
Isoform_192758_148	chr9	+	1000	5	FSM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	19	0	-9	0	multi-exon	FALSE	canonical	3	266	junction_2	16.8430252627015	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGTTTGGTTTCATG	3563	False	NA	9	True	AATAAA	-23	NA	98868444	98884074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_98868566_98874153_98874287_98874565_98874795_98881019_98881070_98883607
Isoform_192761_8	chr9	+	1818	6	FSM	ENSMUSG00000056267.15	ENSMUST00000185799.7	740	6	89	-1167	3	1	multi-exon	FALSE	canonical	3	66	junction_1	121.109867475776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTCTTGGTCATCATG	NA	False	NA	8	True	NA	NA	NA	99125508	99146982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
Isoform_192763_62	chr9	+	2642	18	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-5	-2	combination_of_known_junctions	TRUE	canonical	3	66	junction_1	83.1088001619555	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTAAGTGTCCCTAGTGA	NA	False	NA	16	True	AATAAA	-21	NA	99125500	99182455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
Isoform_192764_9	chr9	+	2461	5	ISM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	-13	-1	-5	1	intron_retention	FALSE	canonical	3	228	junction_1	61.0384100382702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTCTTGGTCATCATG	NA	False	NA	8	True	NA	NA	NA	99125500	99146982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878
Isoform_192765_47	chr9	+	1793	6	FSM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	-24	-1	-5	1	multi-exon	FALSE	canonical	3	228	junction_1	56.4361586219332	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTCTTGGTCATCATG	NA	False	NA	8	True	NA	NA	NA	99125489	99146982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
Isoform_192770_152	chr9	+	2597	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	6	3	-5	-3	multi-exon	TRUE	canonical	3	165	junction_10	72.0150887688172	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125500	99182454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
Isoform_192771_8	chr9	+	3401	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	1	-2	intron_retention	FALSE	canonical	3	165	junction_10	73.8784633282934	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTAAGTGTCCCTAGTGA	NA	False	NA	16	True	AATAAA	-21	NA	99125506	99182455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
Isoform_192773_13	chr9	+	2467	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	75.3706466404528	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125507	99182454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_99125544_99128319_99128420_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
Isoform_192774_6	chr9	+	2490	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	86.1095777193223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACGTAAGTGTCCCTAGT	NA	False	NA	14	True	AATAAA	-19	NA	99125506	99182453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_99125544_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
Isoform_192779_146	chr9	+	2081	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	19	161	-10	-161	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATCCTATTGGCTCTTG	6425	False	NA	NA	False	ATTAAA	-18	NA	99457870	99466393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
Isoform_19278_719	chr11	+	2234	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	-3	4	-3	-4	multi-exon	FALSE	canonical	3	228	junction_1	27.0805712775824	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGACTCTGTTTGTAGCT	NA	False	NA	17	True	ATTAAA	-14	NA	4845339	4878861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
Isoform_192780_145	chr9	+	2193	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	20	48	-9	-48	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATGTAATTATTCAATG	6426	False	NA	1	True	ATTAAA	-12	NA	99457871	99466506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
Isoform_192782_13	chr9	+	2238	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	19	4	-10	-4	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGCTGTCCATCCTGCT	6425	False	NA	45	True	NA	NA	NA	99457870	99466550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
Isoform_192784_9	chr9	+	2743	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	20	-502	-9	502	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGTGCTCTAGAAAGT	6426	False	NA	NA	False	AATAAA	-12	NA	99457871	99467056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
Isoform_192788_7	chr9	+	4065	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.75407464324195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTCGTTCTTTGTTAT	NA	False	NA	NA	False	AATATA	-20	NA	99511621	99551308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
Isoform_192789_3	chr9	+	4920	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-20	810	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.26634360823522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACGCTCGTGTTTGTCA	NA	False	NA	NA	False	AATAGA	-33	NA	99511574	99552119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
Isoform_19279_8	chr11	+	2140	19	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	3	1	combination_of_known_splicesites	TRUE	canonical	1	1	junction_1	69.3319310755633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTTTGTAGCTCCTTG	NA	False	NA	22	True	ATTAAA	-19	NA	4845322	4878866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_4845379_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
Isoform_192790_11	chr9	+	4063	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.26634360823522	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCGTTCTTTGTTATT	NA	False	NA	NA	False	AATATA	-21	NA	99511621	99551309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
Isoform_192791_4	chr9	+	3974	16	FSM	ENSMUSG00000037784.15	ENSMUST00000078367.12	3981	16	7	0	7	0	multi-exon	FALSE	canonical	2	2	junction_1	6.14997741639937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCGTTCTTTGTTATT	NA	False	NA	NA	False	AATATA	-21	NA	99511601	99551309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_99511723_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
Isoform_192792_4	chr9	+	3995	16	NIC	ENSMUSG00000037784.15	novel	3981	16	NA	NA	22	-7	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	5.64348198268488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTATTATGTCGTTCTT	NA	False	NA	NA	False	AATATA	-14	NA	99511570	99551302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_99511723_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
Isoform_192793_3	chr9	+	3716	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-9	-282	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	5.64579489531811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTCTTGTCCCCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	99511886	99550934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_99512016_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
Isoform_192798_12	chr9	+	5107	34	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	-102	2	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	68.4680054375402	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGTTCTCAAGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	100479748	100839454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
Isoform_192799_28	chr9	+	5987	34	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	161	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	68.4680054375402	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100480011	100840597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
Isoform_192811_17	chr9	+	6072	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	113	1	-39	0	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525613	100840597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
Isoform_192812_310	chr9	+	6016	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	169	1	1	0	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525669	100840597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
Isoform_192819_11	chr9	+	5909	33	FSM	ENSMUSG00000037286.16	ENSMUST00000041418.13	5909	33	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_30	76.7811355310502	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525665	100840597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100836273_100836389_100838421_100838503_100838587
Isoform_192823_11	chr9	+	5913	33	NIC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	3	23	junction_4	76.1785461822257	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGCCTTGTGGTTATC	NA	False	NA	8	True	AATAAA	-8	NA	100525669	100840591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
Isoform_192838_6	chr9	+	3604	2	FSM	ENSMUSG00000066415.5	ENSMUST00000085177.5	4889	2	-708	1993	-47	1022	multi-exon	FALSE	canonical	3	56	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTTAAGCTGTTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	100956106	100980006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_100957474_100977769
Isoform_192840_3	chr9	+	2462	11	FSM	ENSMUSG00000035606.9	ENSMUST00000039390.6	5837	11	201	3174	201	-3174	multi-exon	TRUE	canonical	0	0	junction_1	0.640312423743285	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGCCTGCTCTTGTG	NA	False	NA	NA	False	AAAAAG	-40	NA	102383149	102420264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102383478_102386309_102386373_102390171_102390235_102398487_102398563_102400516_102400580_102402596_102402680_102403894_102404004_102405098_102405217_102414799_102414989_102416196_102416388_102419084
Isoform_192841_523	chr9	+	391	3	FSM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	9	189	9	-6	multi-exon	TRUE	canonical	3	1105	junction_1	209.5	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATATGCCCACTTGGT	NA	False	NA	11	True	AATAAA	-11	NA	102503503	102511435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102503546_102506961_102507088_102511212
Isoform_192843_7	chr9	+	463	3	FSM	ENSMUSG00000035048.14	ENSMUST00000188398.7	727	3	256	8	-83	0	multi-exon	FALSE	canonical	3	126	junction_1	699	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	False	NA	17	True	AATAAA	-17	NA	102503778	102511441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102503887_102506961_102507088_102511212
Isoform_192847_21	chr9	+	4285	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-40	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.4896090146283	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102594447	102610615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_102594642_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_192850_97	chr9	+	4235	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	91	2	91	-2	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102594957	102610615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_192851_473	chr9	+	4184	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	142	2	142	-2	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102595008	102610615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_192857_65	chr9	+	4144	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.1808500241946	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102595676	102610615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_102595730_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_192859_17	chr9	+	4328	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	66.4161961505709	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102595675	102610615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_102595913_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_192886_70	chr9	+	2953	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	-43	-405	-43	-6	multi-exon	FALSE	non_canonical	0	0	junction_7	106.419462697461	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCTCACAGTGTG	NA	False	NA	46	True	ATTAAA	-26	NA	102712072	102785146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
Isoform_19289_1040	chr11	+	3786	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	86	213	-2	-151	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGCACATTTCTTCCCT	NA	False	NA	19	True	AATAAA	-19	NA	4936909	4992578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
Isoform_192896_91	chr9	+	2894	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	-48	6	7	-6	multi-exon	FALSE	canonical	3	312	junction_7	39.7877019252155	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCTCACAGTGTG	NA	False	NA	46	True	ATTAAA	-26	NA	102712122	102785146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
Isoform_192899_9	chr9	+	2530	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	-98	420	-43	-9	multi-exon	TRUE	canonical	3	312	junction_7	39.7877019252155	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATATCGCCCCCGCA	NA	False	NA	56	True	NA	NA	NA	102712072	102784732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
Isoform_19290_72	chr11	+	3937	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	86	62	-2	0	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGGCCAGTGTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	4936909	4992729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
Isoform_192901_4	chr9	+	4051	14	FSM	ENSMUSG00000032548.15	ENSMUST00000035148.13	7122	14	470	2601	-27	-2601	multi-exon	FALSE	canonical	2	4	junction_10	4.55472964402691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTTGTAAATTTGTGC	NA	False	NA	NA	False	NA	NA	NA	102885670	102965049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102885915_102923883_102924022_102927342_102927506_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
Isoform_192902_4	chr9	+	4552	14	FSM	ENSMUSG00000032548.15	ENSMUST00000035148.13	7122	14	-31	2601	-31	-2601	multi-exon	FALSE	canonical	2	4	junction_10	4.55472964402691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTTGTAAATTTGTGC	NA	False	NA	NA	False	NA	NA	NA	102885169	102965049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102885915_102923883_102924022_102927342_102927506_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
Isoform_192904_13	chr9	+	2968	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	-39	2078	-19	-2078	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGTAGTCCACAGAA	194	False	NA	NA	False	AATAAA	-27	NA	102988966	103060397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
Isoform_192908_11	chr9	+	5041	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	-40	6	-20	-6	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCTCCTTGTTGACT	193	False	NA	4	True	AATAAA	-17	NA	102988965	103062469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
Isoform_192915_526	chr9	+	5254	28	FSM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	-32	2	-32	-2	multi-exon	FALSE	canonical	3	379	junction_13	76.5309229485215	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTATTGATTTGTTCAT	921	False	NA	12	True	AATAAA	-17	NA	103182381	103227625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
Isoform_192918_20	chr9	+	5109	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-34	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_17	132.54375184763	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTATTGATTTGTTCAT	919	False	NA	12	True	AATAAA	-17	NA	103182379	103227625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
Isoform_192920_26	chr9	+	7809	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-34	-2	intron_retention	FALSE	canonical	3	480	junction_14	65.9353839153986	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTATTGATTTGTTCAT	919	False	NA	12	True	AATAAA	-17	NA	103182379	103227625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
Isoform_192955_12	chr9	+	5675	27	FSM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	220	4	-1	-4	multi-exon	FALSE	canonical	3	11	junction_1	5.77333187568024	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTGGCCAAGTTTAG	NA	False	NA	10	True	AATAAA	-24	NA	103879964	103921013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
Isoform_192956_14	chr9	+	5645	27	FSM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	172	82	-40	-82	multi-exon	TRUE	canonical	3	11	junction_1	5.77333187568024	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTTGCAGTCTGTAT	NA	False	NA	-68	True	AATAAA	-18	NA	103879916	103920935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
Isoform_192957_13	chr9	+	3072	8	ISM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	32984	87	-318	-87	3prime_fragment	FALSE	canonical	3	24	junction_1	2.71052370871575	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCTCATTTTGCAGTC	NA	False	NA	-73	True	AATAAA	-13	NA	103912728	103920930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
Isoform_192958_6	chr9	+	3158	8	ISM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	32984	1	-318	-1	3prime_fragment	FALSE	canonical	3	24	junction_1	2.71052370871575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCCAAGTTTAGTCA	NA	False	NA	13	True	AATAAA	-27	NA	103912728	103921016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
Isoform_192959_84	chr9	+	3330	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	38	76	2	-76	multi-exon	FALSE	canonical	3	30	junction_7	6.62112793865633	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTTATTGTCATTT	NA	False	NA	16	True	NA	NA	NA	103940922	104004848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
Isoform_192960_11	chr9	+	3642	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	-280	82	29	-82	multi-exon	FALSE	canonical	3	30	junction_7	6.62112793865633	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTCTGTTTCTTATTG	NA	False	NA	10	True	NA	NA	NA	103940604	104004842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
Isoform_192961_78	chr9	+	3366	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	8	70	8	-70	multi-exon	FALSE	canonical	3	30	junction_7	6.62112793865633	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTGTCATTTTATGGT	NA	False	NA	22	True	NA	NA	NA	103940892	104004854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
Isoform_192962_32	chr9	+	2280	9	FSM	ENSMUSG00000032563.17	ENSMUST00000149243.8	2309	9	30	-1	-1	1	multi-exon	FALSE	canonical	3	494	junction_1	31.1879383736726	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCCTTTTTTGTGT	NA	False	NA	NA	False	AATAAA	-3	NA	104930467	104953672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360
Isoform_192963_773	chr9	+	1518	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	30	2424	-1	-2	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGTTGTGAAACAGAA	NA	False	NA	18	True	ATTAAA	-15	NA	104930467	104954663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
Isoform_192965_27	chr9	+	1619	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	29	2324	-2	80	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGGAGGAGGACTTTT	NA	False	NA	118	True	AATATA	-24	NA	104930466	104954763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
Isoform_192970_4	chr9	+	2393	6	FSM	ENSMUSG00000032567.17	ENSMUST00000123807.8	2349	6	-48	4	-25	-4	multi-exon	FALSE	canonical	2	5	junction_2	22.5086649981735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTCTGTATTTATTTA	NA	False	NA	NA	False	AATACA	-12	NA	105272565	105282662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_105272865_105273743_105273905_105273996_105275058_105278674_105278886_105280594_105280791_105282197
Isoform_192971_16	chr9	+	2544	6	NIC	ENSMUSG00000032567.17	novel	809	6	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	20	junction_4	18.4932420089069	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGTATTTATTTAT	NA	False	NA	NA	False	AATACA	-13	NA	105272566	105282663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
Isoform_192973_6	chr9	+	3167	5	NIC	ENSMUSG00000032567.17	novel	2755	5	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	32	junction_3	13.5092560861063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGTATTTATTTATA	NA	False	NA	NA	False	AATACA	-14	NA	105272563	105282664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105280791_105282197
Isoform_192976_33	chr9	+	2491	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-29	293	-29	-2	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGTATTTATTTATA	NA	False	NA	NA	False	AATACA	-14	NA	105272561	105282664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
Isoform_192978_4	chr9	+	2735	6	NIC	ENSMUSG00000032567.17	novel	1886	6	NA	NA	-26	-3	intron_retention	FALSE	canonical	3	19	junction_1	19.6916225842362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGTATTTATTTAT	NA	False	NA	NA	False	AATACA	-13	NA	105272564	105282663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
Isoform_192979_5	chr9	+	2680	5	NIC	ENSMUSG00000032567.17	novel	2755	5	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	19	junction_1	18.0138835346518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGTATTTATTTATA	NA	False	NA	NA	False	AATACA	-14	NA	105272561	105282664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105280594_105280791_105282197
Isoform_192981_49	chr9	+	4512	20	NIC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	35.7025259626095	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520196	105564848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_105520227_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
Isoform_192983_310	chr9	+	4875	20	FSM	ENSMUSG00000032571.15	ENSMUST00000065778.13	4711	20	-172	8	-10	0	multi-exon	FALSE	canonical	3	108	junction_1	21.4158146964708	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520196	105564848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
Isoform_192986_7	chr9	+	5692	19	NIC	ENSMUSG00000032571.15	novel	4756	20	NA	NA	5	0	intron_retention	FALSE	canonical	3	118	junction_2	20.5297886550793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520184	105564848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
Isoform_192997_169	chr9	+	3744	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	-31	34	-31	-34	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTCGTAAACAGGATTT	NA	False	NA	20	True	TATAAA	-17	NA	106048095	106068304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
Isoform_192999_386	chr9	+	3712	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	2	33	1	-33	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCGTAAACAGGATTTT	NA	False	NA	21	True	TATAAA	-18	NA	106048128	106068305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
Isoform_1930_4	chr10	-	2985	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	-451	-1647	-19	0	multi-exon	FALSE	canonical	3	216	junction_5	179.465205541353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATAGTTGATGGTTGCA	8130	False	NA	-31	True	AATAAA	-15	NA	40134123	40123698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
Isoform_193008_89	chr9	+	3641	8	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	76.5447714792874	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCTTCCATTGAGTTT	NA	False	NA	49	True	NA	NA	NA	106048127	106068333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
Isoform_193018_530	chr9	+	1563	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	27	6	-2	-2	multi-exon	FALSE	canonical	3	299	junction_8	33.0111250186963	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATACTGAGCCTGGGT	NA	False	NA	13	True	AATAAA	-10	NA	106080333	106092582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
Isoform_193025_17	chr9	+	1454	7	ISM	ENSMUSG00000023277.14	ENSMUST00000188650.2	1508	8	4802	4	-119	-2	3prime_fragment	FALSE	canonical	3	299	junction_6	32.8705372974374	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATACTGAGCCTGGGT	NA	False	NA	13	True	AATAAA	-10	NA	106088798	106092582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
Isoform_193028_58	chr9	+	1223	6	FSM	ENSMUSG00000023277.14	ENSMUST00000217523.2	819	6	0	-404	0	-2	multi-exon	FALSE	canonical	3	299	junction_5	34.8906864363543	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATACTGAGCCTGGGT	NA	False	NA	13	True	AATAAA	-10	NA	106089387	106092582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
Isoform_193030_8	chr9	+	1734	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	-33	636	-33	-5	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTACCCAGTCTGGGAT	9524	False	NA	15	True	AATAAA	-27	NA	106158226	106227084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
Isoform_193031_271	chr9	+	1390	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	303	644	-16	0	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCCACATCTTACCCAG	9860	False	NA	7	True	AATAAA	-19	NA	106158562	106227076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
Isoform_193032_33	chr9	+	2047	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	291	-1	-28	1	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTTGCCTGATCTTG	9848	False	NA	23	True	AGTAAA	-17	NA	106158550	106227721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
Isoform_193033_7	chr9	+	3303	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	302	-1268	-17	1268	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTCTGTCGACGCTG	9859	False	NA	NA	False	AATAAA	-14	NA	106158561	106228988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
Isoform_193037_143	chr9	+	3232	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	-22	3	-22	0	multi-exon	FALSE	canonical	3	135	junction_1	12	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGTCCTGGTGTTCA	NA	False	NA	35	True	AATAAA	-16	NA	106245808	106252920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106246523_106247899_106248335_106250837
Isoform_193039_114	chr9	+	3282	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	-72	3	-72	0	multi-exon	FALSE	canonical	3	135	junction_1	12	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGTCCTGGTGTTCA	NA	False	NA	35	True	AATAAA	-16	NA	106245758	106252920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106246523_106247899_106248335_106250837
Isoform_193046_4	chr9	+	3130	4	NIC	ENSMUSG00000053716.10	novel	3213	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	68.585712797929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCCTGGTGTTCAATA	NA	False	NA	38	True	AATAAA	-19	NA	106245830	106252923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_106246523_106247899_106248335_106250837_106252267_106252349
Isoform_193047_372	chr9	+	777	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	-44	0	-44	0	multi-exon	FALSE	canonical	3	2142	junction_1	1217.38161642108	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306608	106308767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
Isoform_193051_46	chr9	+	861	4	FSM	ENSMUSG00000048758.15	ENSMUST00000217081.2	466	4	1	-396	1	0	multi-exon	FALSE	canonical	3	58	junction_1	2158.78427721613	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306761	106308767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106307013_106307168_106307214_106307506_106307572_106308267
Isoform_193055_37	chr9	+	1016	3	FSM	ENSMUSG00000048758.15	ENSMUST00000213448.2	845	3	8	-179	1	0	multi-exon	FALSE	canonical	3	3966	junction_1	565.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCTGTTGTCATA	NA	False	NA	2	True	AATAAA	-18	NA	106306761	106308766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106307214_106307506_106307572_106308267
Isoform_193058_12	chr9	+	1452	4	FSM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	293	0	15	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTTTGCTGTCTCCGG	NA	False	NA	13	True	AATAAA	-20	NA	106325866	106330122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182
Isoform_193062_913	chr9	+	1974	13	FSM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	57	4	0	-4	multi-exon	FALSE	canonical	3	316	junction_11	32.902212016148	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGTGCAGTAATACT	1657	False	NA	23	True	AATAAA	-16	NA	106331097	106341207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
Isoform_193063_45	chr9	+	1847	13	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	99.8749217771909	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGTGCAGTAATACTAG	1589	False	NA	25	True	AATAAA	-18	NA	106331029	106341209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
Isoform_193069_1678	chr9	+	1562	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	21	3	21	-1	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	1678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCCCTTGTTCCTCTGG	NA	False	NA	20	True	ATTAAA	-20	NA	106354488	106362620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
Isoform_193070_71	chr9	+	1593	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	-14	7	-14	1	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTTCTCCCTTGTTCCT	NA	False	NA	16	True	ATTAAA	-16	NA	106354453	106362616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
Isoform_193087_280	chr9	+	5666	24	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	74	-7	combination_of_known_junctions	FALSE	canonical	3	304	junction_23	40.0622389135641	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699146	106758184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
Isoform_193088_53	chr9	+	5698	24	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	42	-7	combination_of_known_junctions	FALSE	canonical	3	304	junction_23	40.0622389135641	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699114	106758184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
Isoform_193090_82	chr9	+	5671	24	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	68	-5	combination_of_known_junctions	FALSE	canonical	3	78	junction_23	71.1541365847348	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTTCCTTGTTTTCTT	NA	False	NA	11	True	AATAAA	-22	NA	106699140	106758186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135
Isoform_193094_9	chr9	+	2162	3	FSM	ENSMUSG00000032578.8	ENSMUST00000085102.6	2850	3	672	16	-12	-16	multi-exon	FALSE	canonical	1	4	junction_1	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGGGTGTCTGGAGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	107173896	107179170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107174234_107177122_107177344_107177566
Isoform_193095_6	chr9	+	2685	6	FSM	ENSMUSG00000037977.7	ENSMUST00000042581.4	2599	6	-92	6	-92	-6	multi-exon	FALSE	canonical	1	2	junction_1	1.32664991614216	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGAGATTGGAGTCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	107217708	107226885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107217988_107218509_107218617_107219405_107219789_107223344_107223371_107224016_107224165_107225143
Isoform_193097_114	chr9	+	2088	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	81	25	81	-25	multi-exon	FALSE	canonical	3	142	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCTCCTGGGCTCCG	NA	False	NA	8	True	AATAAA	-13	NA	107411224	107415847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107412529_107415063
Isoform_193098_371	chr9	+	2056	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	113	25	113	-25	multi-exon	FALSE	canonical	3	142	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCTCCTGGGCTCCG	NA	False	NA	8	True	AATAAA	-13	NA	107411256	107415847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107412529_107415063
Isoform_193099_52	chr9	+	2085	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	121	-12	121	12	multi-exon	FALSE	canonical	3	142	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCATCTTTATCAGA	NA	False	NA	45	True	NA	NA	NA	107411264	107415884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107412529_107415063
Isoform_1931_42	chr10	-	2539	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-11	-2	-6	2	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTTGATGGTTGCATC	8575	False	NA	-29	True	AATAAA	-17	NA	40133678	40123696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
Isoform_193103_11	chr9	+	2124	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	82	-12	82	12	multi-exon	FALSE	canonical	3	142	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCATCTTTATCAGA	NA	False	NA	45	True	NA	NA	NA	107411225	107415884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107412529_107415063
Isoform_193104_156	chr9	+	1418	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	22	1	3	-1	multi-exon	FALSE	canonical	3	98	junction_4	11.6721891691319	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGAGTACTGCTTCAGC	NA	False	NA	12	True	AATAAA	-23	NA	107419446	107422904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
Isoform_193106_6	chr9	+	1773	9	FSM	ENSMUSG00000010057.9	ENSMUST00000193628.6	1736	9	-29	-8	-10	-3	multi-exon	FALSE	canonical	3	98	junction_4	11.1235954169504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTGAGTACTGCTTCA	NA	False	NA	10	True	AATAAA	-21	NA	107419414	107422902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107422040_107422112_107422587_107422689
Isoform_193107_3	chr9	+	1834	8	NIC	ENSMUSG00000010057.9	novel	1736	9	NA	NA	2	-3	intron_retention	FALSE	canonical	3	98	junction_4	11.7594946441467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTGAGTACTGCTTCA	NA	False	NA	10	True	AATAAA	-21	NA	107419426	107422902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107422587_107422689
Isoform_193108_4	chr9	+	1774	6	FSM	ENSMUSG00000010067.14	ENSMUST00000093786.9	1787	6	7	6	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	27.6723688902848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTTTTGGACTCTATA	NA	False	NA	7	True	AATAAA	-14	NA	107428760	107439460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107429046_107431336_107431444_107434651_107434757_107434968_107435267_107435385_107435502_107438597
Isoform_193110_97	chr9	+	1608	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	114	5	114	-5	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTTTTGGACTCT	NA	False	NA	4	True	AATAAA	-11	NA	107431895	107439457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
Isoform_193111_9	chr9	+	1756	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	-31	2	-31	-2	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTTTTGGACTCTATA	NA	False	NA	7	True	AATAAA	-14	NA	107431750	107439460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
Isoform_193113_346	chr9	+	1656	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	9	0	9	0	multi-exon	FALSE	canonical	3	242	junction_1	4.5	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGAGTGGCGTCCAGTG	NA	False	NA	20	True	AATAAA	-21	NA	107440462	107443311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107440732_107441774_107441896_107442045
Isoform_193115_587	chr9	+	1889	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	6	-2	6	-1	multi-exon	FALSE	canonical	3	208	junction_3	7.31816613336672	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTTCTGCTT	NA	False	NA	17	True	ATTAAA	-19	NA	107446321	107449977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
Isoform_193116_11	chr9	+	1821	4	NIC	ENSMUSG00000010047.13	novel	544	2	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	100.360461448831	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGCTTCTTGTCTTTT	NA	False	NA	10	True	ATTAAA	-12	NA	107446578	107449970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107446629_107447302_107448270_107448690_107448781_107449256
Isoform_193117_21	chr9	+	2752	3	NIC	ENSMUSG00000010047.13	novel	1893	4	NA	NA	6	-1	intron_retention	FALSE	canonical	3	208	junction_2	7.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGCTTCTTGTCTTTT	NA	False	NA	10	True	ATTAAA	-12	NA	107446321	107449970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107448270_107448690_107448781_107449256
Isoform_193122_14	chr9	+	3748	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	9	-743	9	11	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454165	107458920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
Isoform_193124_3	chr9	+	6085	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	-3	-3068	-3	2336	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGTGACAGTTTATT	NA	False	NA	8	True	AATAAA	-14	NA	107454153	107461245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
Isoform_193127_5	chr9	+	4243	5	NIC	ENSMUSG00000010051.16	novel	3014	4	NA	NA	-9	2338	intron_retention	FALSE	canonical	3	8	junction_4	12.3970762682174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTGG	NA	False	NA	10	True	AATAAA	-16	NA	107454116	107461247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298_107458135_107460015
Isoform_193128_5	chr9	+	2003	5	NIC	ENSMUSG00000010051.16	novel	2706	5	NA	NA	6	5648	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	13.8089644796415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTCCTCACCATTCTA	NA	False	NA	16	True	CATAAA	-21	NA	107454162	107464557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107454278_107454751_107455676_107456079_107456170_107463580_107463671_107463773
Isoform_19313_5	chr11	+	1215	3	FSM	ENSMUSG00000034209.5	ENSMUST00000037218.2	1110	3	-106	1	-106	-1	multi-exon	FALSE	canonical	3	9	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTAAGGGTTTCTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	5008021	5010384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5008525_5009432_5009558_5009797
Isoform_193132_53	chr9	+	2078	11	ISM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	81	0	-3	0	intron_retention	FALSE	canonical	3	651	junction_3	29.3468908063529	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464921	107470237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474
Isoform_193133_2001	chr9	+	1980	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	76	0	-8	0	multi-exon	FALSE	canonical	3	631	junction_11	35.5716016363504	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464916	107470237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
Isoform_193134_33	chr9	+	2045	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	11	0	11	0	multi-exon	TRUE	canonical	3	631	junction_11	35.5716016363504	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464851	107470237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
Isoform_19314_3	chr11	+	1833	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	57	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	76.5709434119758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	9975	False	NA	18	True	AATAAA	-19	NA	5049133	5056093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049273_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_19315_14	chr11	+	1771	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	72.0831767821036	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049399	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049478_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_193150_7	chr9	+	3496	4	NNC	ENSMUSG00000032583.8	novel	2821	4	NA	NA	-23	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	13.9124245031395	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGTTGCCCTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	107765326	107780327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_107765602_107775870_107776011_107777225_107779329_107779349
Isoform_193151_41	chr9	+	2084	6	FSM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	-53	11	-22	-6	multi-exon	FALSE	canonical	3	19	junction_2	6.62117814289874	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGTTGCCCTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	107765327	107780327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107765602_107775870_107776011_107777225_107777715_107778393_107779160_107779814_107779963_107780060
Isoform_193153_3	chr9	+	4711	19	FSM	ENSMUSG00000032584.13	ENSMUST00000035203.9	4722	19	7	4	7	-2	multi-exon	TRUE	canonical	0	0	junction_3	1.21207912384841	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTAATGGTGTATGCTG	NA	False	NA	NA	False	NA	NA	NA	107784078	107797578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107785580_107788718_107788908_107788992_107789122_107789276_107789448_107789770_107789932_107790274_107790441_107790547_107790685_107791418_107791581_107791674_107791769_107791910_107792127_107792208_107792356_107792435_107792602_107792902_107793131_107793485_107793567_107793750_107793933_107794013_107794124_107794397_107794564_107794962_107795100_107797010
Isoform_193154_106	chr9	+	3031	11	FSM	ENSMUSG00000032936.14	ENSMUST00000035700.14	3277	11	238	8	4	0	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	10	True	AATAAA	-18	NA	107813110	107826882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
Isoform_193155_7	chr9	+	3675	11	FSM	ENSMUSG00000032586.10_ENSMUSG00000032936.14	ENSMUST00000035700.14	3277	11	236	-634	2	634	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGGTCTTTGAAGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	107813108	107827524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
Isoform_193156_8	chr9	+	3242	10	FSM	ENSMUSG00000032936.14	ENSMUST00000192318.2	3253	10	12	-1	2	1	multi-exon	FALSE	canonical	3	36	junction_5	6.48264539813992	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTGGCCACCCTCTT	NA	False	NA	5	True	AATAAA	-13	NA	107813108	107826877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
Isoform_193157_4	chr9	+	3924	10	FSM	ENSMUSG00000032586.10_ENSMUSG00000032936.14	ENSMUST00000192318.2	3253	10	-23	-648	-23	634	multi-exon	FALSE	canonical	3	36	junction_5	6.48264539813992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGGTCTTTGAAGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	107813073	107827524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
Isoform_193158_4	chr9	+	3319	10	NNC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_7	15.6993355210489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTCTGGCCACCCTCT	NA	False	NA	4	True	AATAAA	-12	NA	107813098	107826876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824212_107824360_107824578_107824667_107824942
Isoform_193159_6	chr9	+	3426	9	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	-15	1	intron_retention	FALSE	canonical	3	40	junction_4	5.62222153601225	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTGGCCACCCTCTT	NA	False	NA	5	True	AATAAA	-13	NA	107813081	107826877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
Isoform_193160_7	chr9	+	3498	8	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	40	junction_4	5.27605294646268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTGGCCACCCTCTT	NA	False	NA	5	True	AATAAA	-13	NA	107813098	107826877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107824119_107824280_107824360_107824578_107824667_107824942
Isoform_193164_639	chr9	+	1952	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	15	739	4	6	multi-exon	FALSE	canonical	3	256	junction_7	39.1366001255571	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGCTGTATAAATTTG	NA	False	NA	19	True	AATAAA	-20	NA	107828169	107848730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
Isoform_193165_49	chr9	+	2690	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	15	1	4	-1	multi-exon	FALSE	canonical	3	256	junction_7	39.1366001255571	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTTTGGCAGAGTATT	NA	False	NA	3	True	NA	NA	NA	107828169	107849468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
Isoform_193168_48	chr9	+	2550	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	5	intron_retention	TRUE	canonical	3	271	junction_2	36.9687217865663	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGCTGTATAAATTT	NA	False	NA	18	True	AATAAA	-19	NA	107828168	107848729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
Isoform_19317_3	chr11	+	1854	9	NIC	ENSMUSG00000034175.14	novel	1790	9	NA	NA	-45	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	90.3074609320847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049387	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049567_5049747_5049899_5050384_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055314_5055432_5055718_5055799
Isoform_193171_10	chr9	+	2031	16	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	111.282143920557	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGCTGTATAAATTT	NA	False	NA	18	True	AATAAA	-19	NA	107828159	107848729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_107828372_107833063_107833122_107833386_107833457_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
Isoform_193179_30	chr9	+	4298	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	111.90781920849	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCAAGTCTGTGTG	6853	False	NA	16	True	AATAAA	-16	NA	107879832	107925980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107880022_107901301_107901523_107909197_107909409_107918103_107918286_107921923_107922100_107922661
Isoform_19318_3	chr11	+	1985	7	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	15	1	intron_retention	FALSE	canonical	3	20	junction_2	73.0722625594388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049453	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049567_5049747_5049899_5050384_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184
Isoform_193180_61	chr9	+	4987	5	ISM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	133	1	0	-1	intron_retention	FALSE	canonical	3	292	junction_3	27.3541587331799	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCAAGTCTGTGTG	6853	False	NA	16	True	AATAAA	-16	NA	107879832	107925980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923
Isoform_193184_90	chr9	+	4494	7	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_5	118.632134488651	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6853	False	NA	17	True	AATAAA	-17	NA	107879832	107925981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
Isoform_193189_648	chr9	+	4425	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	133	1	0	-1	multi-exon	FALSE	canonical	3	206	junction_5	50.8700304698159	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCAAGTCTGTGTG	6853	False	NA	16	True	AATAAA	-16	NA	107879832	107925980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
Isoform_19319_17	chr11	+	1843	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	65.8649185834159	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049428	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049567_5049747_5049899_5050384_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_193195_12	chr9	+	4557	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	17	junction_5	122.664746361781	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCAAGTCTGTGTG	6843	False	NA	16	True	AATAAA	-16	NA	107879822	107925980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922222_107922661
Isoform_193199_23	chr9	+	4837	6	FSM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	-9	-2671	0	-2	multi-exon	FALSE	canonical	3	91	junction_5	93.84540478894	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6853	False	NA	15	True	AATAAA	-15	NA	107879832	107925979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922513_107922661
Isoform_19320_7	chr11	+	1887	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-48	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	65.8649185834159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049384	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049567_5049747_5049899_5050384_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_193205_13	chr9	+	1419	10	NIC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1655374700484	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGGACTGGAAGTCAA	NA	False	NA	27	True	NA	NA	NA	107926472	107928899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_193206_7	chr9	+	1618	10	NIC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1655374700484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGTCCTTGTTGTTCA	NA	False	NA	11	True	NA	NA	NA	107926490	107929116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_193207_29	chr9	+	1463	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	-34	0	2	0	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926489	107928901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_193209_10	chr9	+	1679	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	-35	-215	1	1	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGTCCTTGTTGTTCA	NA	False	NA	11	True	NA	NA	NA	107926488	107929116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_193210_79	chr9	+	1767	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	50	885	3	0	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTCCTTGTTGTTC	NA	False	NA	10	True	NA	NA	NA	107926490	107929115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_193212_107	chr9	+	1554	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	49	1099	2	0	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926489	107928901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_193214_7	chr9	+	1633	8	FSM	ENSMUSG00000070284.11	ENSMUST00000137284.8	1853	8	2	218	2	-4	multi-exon	FALSE	canonical	3	100	junction_6	10.1196918562428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCCTGGACTGGAAGTC	NA	False	NA	25	True	NA	NA	NA	107926489	107928897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928442_107928524
Isoform_193215_3	chr9	+	1861	8	FSM	ENSMUSG00000070284.11	ENSMUST00000137284.8	1853	8	-10	2	10	-2	multi-exon	FALSE	canonical	3	100	junction_6	10.1196918562428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGCAGTCCTTGTTGT	NA	False	NA	8	True	NA	NA	NA	107926477	107929113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928442_107928524
Isoform_193216_72	chr9	+	2245	18	FSM	ENSMUSG00000032591.16	ENSMUST00000035211.14	2262	18	18	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_13	9.09998288906715	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTGCTTCTTAGTTTCT	6681	False	NA	19	True	CATAAA	-24	NA	107957652	107962203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
Isoform_193217_3	chr9	+	2708	15	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	27	junction_8	6.60279779907807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTGCTTCTTAGTTT	6655	False	NA	17	True	CATAAA	-22	NA	107957626	107962201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107961407_107961486_107961594_107961691_107961832_107961972
Isoform_193218_4	chr9	+	2505	16	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-3	2	intron_retention	FALSE	canonical	3	16	junction_11	8.54686427228659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGAGTGCTTCTTAGT	6660	False	NA	15	True	CATAAA	-20	NA	107957631	107962199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107959119_107959199_107959321_107959401_107959521_107959663_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
Isoform_193219_174	chr9	+	2110	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	23	0	-3	0	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	False	NA	14	True	NA	NA	NA	108167650	108173697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
Isoform_19322_3	chr11	+	1784	9	FSM	ENSMUSG00000034175.14	ENSMUST00000036320.12	1790	9	7	-1	7	1	multi-exon	FALSE	canonical	3	31	junction_6	83.1500901983876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049445	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055314_5055432_5055718_5055799
Isoform_193224_250	chr9	+	2063	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	19	0	19	0	multi-exon	TRUE	canonical	3	166	junction_5	15.4029218007494	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174087	108179501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
Isoform_193225_435	chr9	+	2023	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	54	5	2	-5	multi-exon	FALSE	canonical	3	166	junction_5	15.4029218007494	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTATGGTCTCTAGCTT	NA	False	NA	16	True	AATAAA	-17	NA	108174122	108179496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
Isoform_193230_32	chr9	+	2132	8	NIC	ENSMUSG00000032607.13	novel	2082	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	166	junction_4	16.1042521954765	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174120	108179501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
Isoform_193234_1383	chr9	+	2027	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	168	2	-142	-2	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTGTATTCTCTTGT	NA	False	NA	13	True	AATAAA	-13	NA	108183495	108215131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
Isoform_193236_1953	chr9	+	1950	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	245	2	-65	-2	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	1953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTGTATTCTCTTGT	NA	False	NA	13	True	AATAAA	-13	NA	108183572	108215131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
Isoform_19324_3	chr11	+	2043	7	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	457	0	-50	0	intron_retention	FALSE	canonical	3	72	junction_2	56.6862711186168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049382	5056091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184
Isoform_19325_5	chr11	+	1955	8	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	461	-1	-46	1	intron_retention	FALSE	canonical	3	72	junction_2	52.4917875014944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049386	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432
Isoform_193265_4368	chr9	+	848	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	222	2	0	-2	multi-exon	FALSE	canonical	3	8868	junction_1	0	4368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTGTGTGTCCTGTGT	NA	False	NA	16	True	AATAAA	-16	NA	108216474	108217540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108216758_108216975
Isoform_193266_995	chr9	+	896	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	174	2	-15	-2	multi-exon	FALSE	canonical	3	8868	junction_1	0	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTGTGTGTCCTGTGT	NA	False	NA	16	True	AATAAA	-16	NA	108216426	108217540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108216758_108216975
Isoform_193268_94	chr9	+	928	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	142	2	-47	-2	multi-exon	FALSE	canonical	3	8868	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTGTGTGTCCTGTGT	NA	False	NA	16	True	AATAAA	-16	NA	108216394	108217540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108216758_108216975
Isoform_19327_107	chr11	+	1879	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	455	-1	-52	1	multi-exon	FALSE	canonical	3	72	junction_2	51.4605431374369	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049380	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_193274_816	chr9	+	3339	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	37	286	-7	0	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225088	108269458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
Isoform_193275_512	chr9	+	3589	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	51	22	7	3	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGGTGCAGTGTGTGG	NA	False	NA	42	True	NA	NA	NA	108225102	108269722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
Isoform_193276_71	chr9	+	3365	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	11	286	-10	0	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225062	108269458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
Isoform_193279_43	chr9	+	3627	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	11	24	-10	1	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTGGGTGCAGTGTGT	NA	False	NA	40	True	NA	NA	NA	108225062	108269720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
Isoform_19328_3	chr11	+	2345	8	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	22	0	intron_retention	FALSE	canonical	3	31	junction_5	75.4940192252043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	9940	False	NA	16	True	AATAAA	-17	NA	5049098	5056091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055348_5055432_5055718_5055799
Isoform_193282_23	chr9	+	3227	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	156.074429359841	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225096	108269458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108268178_108268268_108268877
Isoform_193289_3	chr9	+	1656	2	FSM	ENSMUSG00000049305.7	ENSMUST00000193269.2	384	2	12	-1284	12	-1255	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTTGCGGTCTCCTTG	207	False	NA	8	True	NA	NA	NA	108337745	108341750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108337788_108340136
Isoform_19329_3	chr11	+	2211	6	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-36	1	intron_retention	FALSE	canonical	3	72	junction_1	59.392255387382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049396	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184
Isoform_193290_47	chr9	+	2942	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	28	122	20	10	multi-exon	FALSE	canonical	3	208	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGCACAGCTGAATTAAG	215	False	NA	24	True	AATAAA	-17	NA	108337753	108343015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108337817_108340136
Isoform_193291_192	chr9	+	1679	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	28	1385	20	-1253	multi-exon	FALSE	canonical	3	208	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCGGTCTCCTTGCT	215	False	NA	10	True	NA	NA	NA	108337753	108341752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108337817_108340136
Isoform_193293_7	chr9	+	5571	33	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	1	4	junction_1	39.6159295612257	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9090	False	NA	19	True	AATAAA	-16	NA	108357053	108367729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108357114_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
Isoform_193294_30	chr9	+	5588	33	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	36.5231091228554	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9128	False	NA	19	True	AATAAA	-16	NA	108357091	108367729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108357169_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
Isoform_193295_210	chr9	+	5600	33	FSM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	29	0	5	0	multi-exon	FALSE	canonical	3	106	junction_6	29.6719037980376	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9121	False	NA	19	True	AATAAA	-16	NA	108357084	108367729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
Isoform_193296_5	chr9	+	5895	32	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2	0	intron_retention	FALSE	canonical	3	106	junction_6	29.9277311985561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9118	False	NA	19	True	AATAAA	-16	NA	108357081	108367729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
Isoform_1933_171	chr10	-	713	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-11	1824	-6	-3	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGTCTTGTATGCA	8575	False	NA	-19	True	AAAACA	-18	NA	40133678	40125522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
Isoform_19330_5	chr11	+	2323	8	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	41	1	intron_retention	FALSE	canonical	3	72	junction_1	52.1641835056998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	9959	False	NA	17	True	AATAAA	-18	NA	5049117	5056092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_19331_5	chr11	+	1815	8	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	704	-5	22	3	3prime_fragment	FALSE	canonical	3	72	junction_1	52.1641835056998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCCTGAGTGTCAGTTG	NA	False	NA	21	True	AATAAA	-22	NA	5049629	5056096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_19332_5	chr11	+	2538	8	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-24	0	intron_retention	FALSE	canonical	3	72	junction_1	52.1641835056998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	9743	False	NA	16	True	AATAAA	-17	NA	5048901	5056091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_193321_31	chr9	+	4656	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	-101	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	61.820028925352	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTCTCTGTCTAAA	NA	False	NA	16	True	AATAAA	-18	NA	108367937	108378897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
Isoform_193325_186	chr9	+	4674	27	FSM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-153	-9	101	9	multi-exon	FALSE	canonical	3	222	junction_10	41.4654094097091	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATCCACAACATGTTATG	NA	False	NA	20	True	AATAAA	-24	NA	108367901	108379525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_193328_8	chr9	+	4530	27	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_18	68.2213157964143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGACTGATCCACAAC	NA	False	NA	12	True	AATAAA	-16	NA	108368028	108379517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375330_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_19333_22	chr11	+	2900	3	FSM	ENSMUSG00000020484.20	ENSMUST00000145588.2	987	3	-47	-1866	-37	-1	multi-exon	FALSE	canonical	3	908	junction_2	32	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGTTCTGTGATTTCT	NA	False	NA	33	True	ATTAAA	-16	NA	5470957	5475892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5471201_5471922_5472020_5473332
Isoform_193330_21	chr9	+	4686	27	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	101	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	69.5979153601974	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTCTCTGTCTAAA	NA	False	NA	16	True	AATAAA	-18	NA	108367901	108378897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
Isoform_193335_94	chr9	+	4674	27	FSM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	-142	-15	101	-5	multi-exon	FALSE	canonical	3	118	junction_10	53.0108423653503	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACATGTTATGGCTCCC	NA	False	NA	26	True	AATAAA	-30	NA	108367901	108379531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_193338_27	chr9	+	4654	27	FSM	ENSMUSG00000006676.17	ENSMUST00000085044.14	4520	27	-121	-13	-116	-7	multi-exon	FALSE	canonical	3	46	junction_5	64.3458319914706	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAACATGTTATGGCTC	NA	False	NA	24	True	AATAAA	-28	NA	108367922	108379529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_193342_20	chr9	+	4653	27	NIC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	109	5	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	71.9086061131496	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGATCCACAACATGT	NA	False	NA	16	True	AATAAA	-20	NA	108367909	108379521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_193353_1746	chr9	+	2443	24	FSM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	352	5	0	0	multi-exon	FALSE	canonical	3	468	junction_2	39.8133167299073	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385256	108393135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
Isoform_193355_37	chr9	+	2515	23	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	468	junction_2	38.846487444515	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385257	108393135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392432_108392994
Isoform_19337_1474	chr11	+	1829	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	300	0	-36	0	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTCTGTGATTTCTA	NA	False	NA	34	True	ATTAAA	-17	NA	5470958	5475893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
Isoform_193379_66	chr9	+	3295	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	232.186649056314	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1147	False	NA	65	True	NA	NA	NA	108394285	108437363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108394440_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_193383_1174	chr9	+	3235	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-23	-172	0	1	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1147	False	NA	65	True	NA	NA	NA	108394285	108437363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_193393_22	chr9	+	3307	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	234.862853597584	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1147	False	NA	65	True	NA	NA	NA	108394285	108437363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108394452_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_193394_344	chr9	+	3244	10	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	173.205152034684	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTACTGGAGAACGTG	1147	False	NA	62	True	NA	NA	NA	108394285	108437360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_193405_93	chr9	+	3509	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	10	1	multi-exon	FALSE	canonical	3	61	junction_1	223.453440340488	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1669	False	NA	65	True	NA	NA	NA	108394807	108437363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_193409_27	chr9	+	3449	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	10	1	multi-exon	FALSE	canonical	3	32	junction_1	198.101046669012	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1669	False	NA	65	True	NA	NA	NA	108394807	108437363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr9_+_108395176_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_193410_65	chr9	+	3355	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	80	1	multi-exon	FALSE	canonical	3	32	junction_1	198.101046669012	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1763	False	NA	65	True	NA	NA	NA	108394901	108437363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr9_+_108395176_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_193413_49	chr9	+	4299	10	ISM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	495	-1	10	1	3prime_fragment	FALSE	canonical	3	141	junction_1	164.63899902514	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1669	False	NA	65	True	NA	NA	NA	108394807	108437363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_19343_41	chr11	+	2598	4	NIC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-36	-2	intron_retention	FALSE	canonical	3	876	junction_3	39.9110121255887	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCCTGTTCTGTGATTTC	NA	False	NA	32	True	ATTAAA	-15	NA	5470958	5475891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5471201_5471922_5472020_5473332_5474385_5474684
Isoform_193436_67	chr9	+	1728	15	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	848.284297862456	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGACAACTGAT	1178	False	NA	17	True	AATAAA	-10	NA	108437667	108442764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
Isoform_193438_2931	chr9	+	1656	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	183	19	-1	1	multi-exon	FALSE	canonical	3	1280	junction_13	396.993628196225	2931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGACAACTGAT	1178	False	NA	17	True	AATAAA	-10	NA	108437667	108442764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
Isoform_193439_159	chr9	+	1696	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	143	19	-10	1	multi-exon	TRUE	canonical	3	1280	junction_13	396.993628196225	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGACAACTGAT	1138	False	NA	17	True	AATAAA	-10	NA	108437627	108442764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
Isoform_193457_8	chr9	+	1890	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	10	junction_5	47.0368912217046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	108447094	108449972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448634_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_193458_146	chr9	+	1734	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	10	2	10	1	multi-exon	FALSE	canonical	3	83	junction_8	26.2473926292634	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447094	108449971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
Isoform_193459_3	chr9	+	1801	11	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	1	intron_retention	FALSE	canonical	3	83	junction_8	25.9470614906582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447096	108449971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449497_108449591_108449661_108449749
Isoform_193461_5	chr9	+	1811	11	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	110	junction_8	20.6968596651763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	108447094	108449972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449317_108449385_108449497_108449591_108449661_108449749
Isoform_193462_6	chr9	+	1967	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	128	junction_6	9.80752262296652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447094	108449970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591
Isoform_193463_59	chr9	+	1878	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	0	intron_retention	FALSE	canonical	3	128	junction_6	18.4357409183867	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	108447096	108449972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_193464_9	chr9	+	1974	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	1	intron_retention	FALSE	canonical	3	128	junction_6	19.4679223339318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447094	108449971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449661_108449749
Isoform_193465_6	chr9	+	2240	8	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	1	intron_retention	FALSE	canonical	3	128	junction_5	9.44803186502083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447094	108449971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448719_108448811_108448874_108448980_108449497_108449591
Isoform_193466_14	chr9	+	2149	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	1	intron_retention	FALSE	canonical	3	128	junction_5	18.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447096	108449971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_193467_3	chr9	+	2212	8	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	15	0	intron_retention	FALSE	canonical	3	128	junction_5	19.5740352800044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447127	108449970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448719_108448811_108448874_108448980_108449661_108449749
Isoform_193468_4	chr9	+	2335	7	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	136	junction_2	7.82446306287034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447094	108449973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448874_108448980_108449497_108449591
Isoform_193469_10	chr9	+	2243	8	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	136	junction_2	17.864569884071	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447094	108449970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_193470_7	chr9	+	1821	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	11	0	intron_retention	FALSE	canonical	2	4	junction_2	48.787015070674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	108447095	108449972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447820_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_193471_3	chr9	+	1907	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-5	1	intron_retention	FALSE	canonical	2	4	junction_2	51.6163733712472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447103	108449971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108447275_108447348_108447645_108447820_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449661_108449749
Isoform_193472_1371	chr9	+	1708	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	77	-2	77	2	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGTGATATTTTCTCT	5154	False	NA	5	True	NA	NA	NA	108539373	108561842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
Isoform_193473_118	chr9	+	1790	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	-7	0	3	0	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	5070	False	NA	3	True	NA	NA	NA	108539289	108561840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
Isoform_193485_571	chr9	+	4952	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	19	-6	19	6	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	571	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTCTCCTGTTGTA	1322	False	NA	26	True	AATAAA	-26	NA	108569360	108627641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
Isoform_1935_8	chr10	-	1190	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-468	1804	-31	17	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGCTTAGCTGTGTGT	8118	False	NA	1	True	AAAACA	-38	NA	40134135	40125502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
Isoform_19350_20	chr11	+	846	5	ISM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	-10	4087	-10	-1253	5prime_fragment	FALSE	canonical	3	13	junction_2	33.1313673125635	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAGACTGTGAGTCA	NA	False	NA	9	True	NA	NA	NA	5712139	5730623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205
Isoform_193505_21	chr9	+	1688	2	FSM	ENSMUSG00000032599.13	ENSMUST00000193634.2	2820	2	-15	1147	11	-5	multi-exon	FALSE	canonical	3	119	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGGCTTGGCTCACCC	NA	False	NA	3	True	AATAAA	-17	NA	108661005	108674886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108661070_108673262
Isoform_193506_23	chr9	+	997	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-47	-343	-4	-4	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGCTTGGCTCACCCA	NA	False	NA	4	True	AATAAA	-18	NA	108661016	108674887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
Isoform_193507_17	chr9	+	1298	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-48	-643	-5	-1	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTGTCTTGTAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	108661015	108675187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
Isoform_193509_11	chr9	+	1169	3	FSM	ENSMUSG00000032599.13	ENSMUST00000192307.6	1191	3	22	0	-4	0	multi-exon	FALSE	canonical	3	25	junction_2	47	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	108661016	108675188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108661070_108673262_108673596_108674405
Isoform_19351_6	chr11	+	954	5	ISM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	-22	3991	-1	-1157	5prime_fragment	FALSE	canonical	3	13	junction_2	33.1313673125635	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATTGGTGGACGGCATT	NA	False	NA	105	True	AAAACA	-12	NA	5712127	5730719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205
Isoform_193510_5	chr9	+	802	3	FSM	ENSMUSG00000032599.13	ENSMUST00000194875.6	748	3	-55	1	-12	-1	multi-exon	FALSE	canonical	2	13	junction_2	53	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTTGGCTCACCCACCA	NA	False	NA	7	True	AATAAA	-21	NA	108661008	108674890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108661070_108673262_108673596_108674482
Isoform_193511_10	chr9	+	1829	7	NIC	ENSMUSG00000032599.13	novel	1846	6	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	38.4693239983352	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACAGTGCTGCTGTCGTT	NA	False	NA	13	True	AATACA	-17	NA	108661010	108683530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108661070_108673262_108673596_108675308_108675378_108675469_108675693_108676440_108676617_108681740_108681917_108682737
Isoform_193512_39	chr9	+	1762	6	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	35.9243649909083	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGCTGCTGTCGTTCT	NA	False	NA	15	True	AATACA	-19	NA	108661010	108683532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108661070_108673262_108673596_108675469_108675693_108676440_108676617_108681740_108681917_108682737
Isoform_193514_6	chr9	+	3538	6	NIC	ENSMUSG00000032599.13	novel	1846	6	NA	NA	-4	1	intron_retention	FALSE	canonical	3	6	junction_2	39.7894458368045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGCTGCTGTCGTTCT	NA	False	NA	15	True	AATACA	-19	NA	108661016	108683532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108661070_108673262_108675378_108675469_108675693_108676440_108676617_108681740_108681917_108682737
Isoform_193515_6	chr9	+	3628	5	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	-2	1	intron_retention	FALSE	canonical	3	21	junction_3	39.6736688497547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGCTGCTGTCGTTCT	NA	False	NA	15	True	AATACA	-19	NA	108661018	108683532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108661070_108673262_108675693_108676440_108676617_108681740_108681917_108682737
Isoform_193519_171	chr9	+	2963	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	6	391	1	-391	multi-exon	FALSE	canonical	3	52	junction_4	11.5551215196264	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3156	False	NA	5	True	AATAAA	-16	NA	108685572	108695652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_19352_4	chr11	+	1666	6	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	34.213447648549	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATTTAAGTTTCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	5712153	5734713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205_5730636_5733891
Isoform_193522_4	chr9	+	3265	13	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-2	-391	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	24.5870053754688	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3153	False	NA	5	True	AATAAA	-16	NA	108685569	108695652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108690208_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_193523_9	chr9	+	2473	12	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	0	-391	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	23.3436419573877	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3155	False	NA	5	True	AATAAA	-16	NA	108685571	108695652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_193525_3	chr9	+	2645	11	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	6	-393	intron_retention	FALSE	canonical	2	7	junction_4	23.5416651917404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGCTTCCCTGTATG	3161	False	NA	3	True	AATAAA	-14	NA	108685577	108695650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_193526_7	chr9	+	3207	12	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	6	-391	intron_retention	FALSE	canonical	3	72	junction_6	8.15551326982029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3161	False	NA	5	True	AATAAA	-16	NA	108685577	108695652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_193527_4	chr9	+	4449	11	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	1	-393	intron_retention	FALSE	canonical	3	72	junction_5	8.03803458564343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGCTTCCCTGTATG	3156	False	NA	3	True	AATAAA	-14	NA	108685572	108695650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_193528_4	chr9	+	3939	12	ISM	ENSMUSG00000023473.14	ENSMUST00000213524.3	11571	36	16817	5	-98	-5	3prime_fragment	FALSE	canonical	1	2	junction_4	2.83717936987768	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTTGTTCCTCTTTCT	NA	False	NA	4	True	AATAAA	-11	NA	108720335	108730163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_108720500_108720742_108720918_108721124_108721238_108721661_108721742_108722240_108722368_108722900_108723018_108723112_108723262_108723518_108723629_108723906_108724066_108724743_108724945_108725794_108726675_108728499
Isoform_193530_70	chr9	+	2664	21	FSM	ENSMUSG00000023259.18	ENSMUST00000188557.8	2552	21	-97	-15	1	-1	multi-exon	TRUE	canonical	3	10	junction_1	9.81121806912883	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCAGGCTCTGCTGTGGC	NA	False	NA	13	True	AATAAA	-13	NA	108731236	108742111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108731386_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
Isoform_193532_36	chr9	+	3307	21	FSM	ENSMUSG00000023259.18	ENSMUST00000239562.1	2659	21	-654	6	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	9.81121806912883	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCAGGCTCTGCTGTGGC	NA	False	NA	13	True	AATAAA	-13	NA	108731241	108742111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108732034_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
Isoform_193539_13188	chr9	+	1584	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	68	1	-13	-1	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	13188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTGTCCTTCCTTAG	NA	False	NA	17	True	AATAAA	-13	NA	108765768	108778690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
Isoform_19355_19	chr11	+	584	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	9	1253	9	-1253	multi-exon	FALSE	canonical	3	68	junction_2	16.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAGACTGTGAGTCA	NA	False	NA	9	True	NA	NA	NA	5712137	5730623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5712241_5715508_5715572_5730205
Isoform_19356_12	chr11	+	1833	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	11	2	-10	-2	multi-exon	FALSE	canonical	3	68	junction_2	16.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTGTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	5712139	5731874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5712241_5715508_5715572_5730205
Isoform_19357_5	chr11	+	1103	4	NIC	ENSMUSG00000083844.9	novel	441	7	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	2	12	junction_3	36.7362975210561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATTTAAGTTTCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	5712128	5734713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5712241_5715508_5715572_5730205_5730312_5733891
Isoform_193576_12	chr9	+	3334	14	FSM	ENSMUSG00000025648.19	ENSMUST00000198140.5	3488	14	151	3	-19	-3	multi-exon	FALSE	canonical	3	8	junction_7	3.73057097014835	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTAATATGAGGTGGT	NA	False	NA	NA	False	AATAAA	-35	NA	108820996	108861293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
Isoform_193577_101	chr9	+	1806	6	FSM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	46	58	9	-5	multi-exon	FALSE	canonical	3	51	junction_2	78.9186923358465	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTTCCCCTTTCTTCAG	NA	False	NA	13	True	AATAAA	-13	NA	108867678	108886787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108867833_108869937_108870095_108880431_108880522_108885045_108885162_108885354_108885574_108885717
Isoform_193578_260	chr9	+	1823	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	6	5	6	-5	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTTCCCCTTTCTTCAG	NA	False	NA	13	True	AATAAA	-13	NA	108867658	108886787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
Isoform_193579_11	chr9	+	1861	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	19	-46	2	-7	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTTCTGTCTACTT	NA	False	NA	64	True	NA	NA	NA	108867671	108886838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
Isoform_19358_3	chr11	+	1573	5	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	42.8740889116025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAATTGACATTTAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	5712150	5734708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5712241_5715508_5715572_5730205_5730636_5732184_5732358_5733891
Isoform_193583_28	chr9	+	1501	4	FSM	ENSMUSG00000025647.17	ENSMUST00000154184.5	1038	4	49	-512	-36	-5	multi-exon	FALSE	canonical	3	51	junction_1	98.8005847935909	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTTCCCCTTTCTTCAG	NA	False	NA	13	True	AATAAA	-13	NA	108883979	108886787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108884076_108885045_108885162_108885354_108885574_108885717
Isoform_193585_4	chr9	+	2402	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	0	-876	0	876	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCAGGAGGCACCGTCT	NA	False	NA	NA	False	AATAAA	-36	NA	108911560	108922433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
Isoform_193586_143	chr9	+	1522	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	1	3	1	-3	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAGTTATATCAGACT	NA	False	NA	11	True	ATTAAA	-25	NA	108911561	108921554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
Isoform_193587_242	chr9	+	1046	7	FSM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	25	3	2	-3	multi-exon	FALSE	canonical	3	194	junction_1	146.935359937627	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCCTGTGCAAGCTTTC	NA	False	NA	22	True	AATAAA	-29	NA	109661850	109672039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_19359_8	chr11	+	1417	4	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	40.7130882586369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGACATTTAAGTTTCC	NA	False	NA	NA	False	AATAAA	-24	NA	5712136	5734711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_5712241_5715508_5715572_5730205_5730636_5733891
Isoform_193590_9	chr9	+	846	5	NIC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	254.098775085595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGGCAGTACTCCTG	NA	False	NA	11	True	AATAAA	-18	NA	109661838	109672028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109671519
Isoform_193591_16	chr9	+	945	6	FSM	ENSMUSG00000032478.15	ENSMUST00000198201.5	930	6	0	-15	0	-3	multi-exon	FALSE	canonical	3	47	junction_2	211.367547177896	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCCTGTGCAAGCTTTC	NA	False	NA	22	True	AATAAA	-29	NA	109661854	109672039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109661876_109662263_109662364_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_193593_8	chr9	+	1107	7	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	223.458733451068	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661850	109672042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_109661876_109662263_109662364_109664327_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_193594_293	chr9	+	1120	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	42	-443	4	-2	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTGTGCAAGCTTTCT	NA	False	NA	23	True	AATAAA	-30	NA	109661858	109672040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_193598_12	chr9	+	1023	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200091.5	715	6	5	-313	4	-2	multi-exon	FALSE	canonical	3	47	junction_2	202.945707025303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTGTGCAAGCTTTCT	NA	False	NA	23	True	AATAAA	-30	NA	109661858	109672040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109661957_109662263_109662364_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_193599_8	chr9	+	1182	7	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	215.187321497651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661856	109672042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_109661957_109662263_109662364_109664327_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_19360_6	chr11	+	538	2	ISM	ENSMUSG00000083844.9	ENSMUST00000131130.8	595	3	-29	1617	-8	-1253	5prime_fragment	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAGACTGTGAGTCA	NA	False	NA	9	True	NA	NA	NA	5712120	5730623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_5712241_5730205
Isoform_193601_25	chr9	+	1214	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200468.2	865	6	-50	-299	-38	4	multi-exon	FALSE	canonical	3	493	junction_3	57.3431774494578	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGGCAGTACTCCTG	NA	False	NA	11	True	AATAAA	-18	NA	109662059	109672028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_193604_669	chr9	+	3631	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	1	0	1	0	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704647	109722963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
Isoform_193607_448	chr9	+	3663	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	-31	0	-31	0	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704615	109722963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
Isoform_19361_3	chr11	+	1782	2	ISM	ENSMUSG00000083844.9	ENSMUST00000131130.8	595	3	-23	367	-2	-3	5prime_fragment	FALSE	canonical	3	28	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTTTTGTTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	5712126	5731873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_5712241_5730205
Isoform_193623_108	chr9	+	3660	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	122.641442707544	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704615	109722963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
Isoform_193625_115	chr9	+	3628	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	122.641442707544	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704647	109722963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
Isoform_19363_14	chr11	+	2343	13	FSM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	-18	-687	16	13	multi-exon	FALSE	canonical	3	30	junction_7	109.921057531707	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGAGCATTCGTGCAT	NA	False	NA	11	True	TATAAA	-12	NA	5738503	5750975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
Isoform_19364_6	chr11	+	1989	13	FSM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	-44	-307	-10	-34	multi-exon	FALSE	canonical	3	30	junction_7	109.921057531707	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTCATGTGGTTCATC	NA	False	NA	8	True	NA	NA	NA	5738477	5750595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
Isoform_193647_9	chr9	+	4956	9	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-78	18061	-14	-2866	intron_retention	FALSE	canonical	3	256	junction_1	41.9940471971921	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	109760853	109894954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084
Isoform_193651_45	chr9	+	4984	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	323	784	-17	1	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760850	109912239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_193653_204	chr9	+	4949	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	359	783	19	-1	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATTGAAATGGCCT	NA	False	NA	22	True	AATAAA	-14	NA	109760886	109912240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_193654_123	chr9	+	5726	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	359	6	19	2	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109760886	109913017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_193655_31	chr9	+	5769	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	314	8	-26	0	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109760841	109913015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_193659_31	chr9	+	5619	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-44	-2	20	2	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109760887	109913017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
Isoform_193660_72	chr9	+	4842	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-45	776	19	1	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760886	109912239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
Isoform_193663_17	chr9	+	4951	19	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_17	76.9171632342223	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATTGAAATGGCCT	NA	False	NA	22	True	AATAAA	-14	NA	109760887	109912240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908965_109910488_109910679_109910802
Isoform_193669_64	chr9	+	4741	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	70.836712541944	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATTGAAATGGCCT	NA	False	NA	22	True	AATAAA	-14	NA	109760887	109912240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_193670_34	chr9	+	5514	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	19	-2	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	70.836712541944	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATGTTATGTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	109760886	109913012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_19368_50	chr11	+	2340	13	FSM	ENSMUSG00000020476.15	ENSMUST00000102928.5	2295	13	-26	-19	16	19	multi-exon	FALSE	canonical	3	125	junction_7	84.6740072277201	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTCGTGCATTTCAGT	NA	False	NA	17	True	TATAAA	-18	NA	5738503	5750981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747283_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
Isoform_193724_359	chr9	+	3532	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	5	1	5	-1	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCATAGTTCCTGGCTG	2507	False	NA	15	True	ATTAAA	-25	NA	109961109	110064358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
Isoform_19373_165	chr11	+	2336	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	16	-351	16	18	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTCGTGCATTTCAG	NA	False	NA	16	True	TATAAA	-17	NA	5738503	5750980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
Isoform_193730_1215	chr9	+	5650	29	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	non_canonical	3	394	junction_28	190.854135455348	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTCCCATTCTCTGCA	2487	False	NA	19	True	AATAAA	-19	NA	109961089	110069241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886_110068356_110068375
Isoform_19378_19	chr11	+	3859	21	FSM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	-28	0	-28	0	multi-exon	FALSE	canonical	3	11	junction_16	4.12886182863995	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCCTGTTCTGACTGG	8644	False	NA	8	True	AATAAA	-18	NA	5811918	5822088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817097_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
Isoform_193782_66	chr9	+	2196	5	FSM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	1594	0	-106	0	multi-exon	FALSE	canonical	3	35	junction_4	8.38152730712011	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTAGTGCCGTGGCCT	NA	False	NA	20	True	AATAAA	-21	NA	110074444	110091644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085289_110091127
Isoform_193784_24	chr9	+	2440	5	FSM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	1350	0	-350	0	multi-exon	TRUE	canonical	3	35	junction_4	8.38152730712011	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTAGTGCCGTGGCCT	9787	False	NA	20	True	AATAAA	-21	NA	110074200	110091644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085289_110091127
Isoform_193786_8	chr9	+	2223	5	FSM	ENSMUSG00000032482.10	ENSMUST00000035058.10	3870	5	1636	11	-64	1	multi-exon	FALSE	canonical	2	3	junction_4	20.3531324370476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGTCCACTTCCTTA	NA	False	NA	8	True	AATAAA	-9	NA	110074486	110091632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085370_110091127
Isoform_193787_10	chr9	+	1993	4	FSM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	115	-1	115	0	multi-exon	FALSE	canonical	3	35	junction_3	9.53356643071673	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTAGTGCCGTGGCCT	NA	False	NA	20	True	AATAAA	-21	NA	110075247	110091644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110076459_110080026_110080216_110085212_110085289_110091127
Isoform_193788_4	chr9	+	2157	4	FSM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	-52	2	-52	-2	multi-exon	FALSE	canonical	3	35	junction_3	9.53356643071673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCCTTAGTGCCGTGG	NA	False	NA	17	True	AATAAA	-18	NA	110075080	110091641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110076459_110080026_110080216_110085212_110085289_110091127
Isoform_193790_66	chr9	+	2060	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	23	-779	-8	0	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTGTGTGTGTGTTCCT	2205	False	NA	6	True	AATAAA	-14	NA	110134263	110151170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
Isoform_193791_83	chr9	+	1283	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	23	-2	-8	2	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGAGGTTGTCTTTTT	2205	False	NA	9	True	AATAAA	-19	NA	110134263	110150393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
Isoform_193792_100	chr9	+	4110	23	NIC	ENSMUSG00000032485.15	novel	619	5	NA	NA	6	-15	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	21.4736528936053	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCACATTTACCAGG	NA	False	NA	-4	True	AATAAA	-8	NA	110162369	110214003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
Isoform_193793_81	chr9	+	4225	23	FSM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	-2	4	-2	-4	multi-exon	FALSE	canonical	3	36	junction_1	22.4939385774762	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAGGGGCTGAAGTTC	NA	False	NA	7	True	AATAAA	-19	NA	110162421	110214014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
Isoform_193795_3	chr9	+	4185	23	NIC	ENSMUSG00000032485.15	novel	597	4	NA	NA	8	-15	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	27.2204423060839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCACATTTACCAGG	NA	False	NA	-4	True	AATAAA	-8	NA	110162711	110214003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_110162835_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
Isoform_193801_7	chr9	+	8366	21	FSM	ENSMUSG00000044791.17	ENSMUST00000153838.8	8350	21	-38	22	-38	-3	multi-exon	FALSE	canonical	3	15	junction_1	28.3608885615384	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	17	True	AATAAA	-18	NA	110361626	110447679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110361821_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
Isoform_193804_3	chr9	+	5462	19	NIC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-1397	3	combination_of_known_junctions	FALSE	canonical	3	46	junction_11	22.8065536390067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTGCTCCCTCAAA	NA	False	NA	16	True	AATAAA	-17	NA	110378966	110447678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
Isoform_193808_3	chr9	+	2377	10	FSM	ENSMUSG00000044791.17	ENSMUST00000200460.5	2910	10	537	-4	275	-3	multi-exon	FALSE	canonical	3	46	junction_2	29.7462519684891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	17	True	AATAAA	-18	NA	110403226	110447679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
Isoform_193809_3	chr9	+	2306	10	NIC	ENSMUSG00000044791.17	novel	767	6	NA	NA	3414	-2	combination_of_known_junctions	TRUE	canonical	3	10	junction_1	42.3987537669169	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGCTCCCTCAAAAT	NA	False	NA	18	True	AATAAA	-19	NA	110406365	110447680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_110406407_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
Isoform_19381_22	chr11	+	3897	21	NNC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	4.12886182863995	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCCTGTTCTGACTGG	8609	False	NA	8	True	AATAAA	-18	NA	5811883	5822088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817094_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
Isoform_193811_3	chr9	+	1007	2	ISM	ENSMUSG00000044791.17	ENSMUST00000197399.2	767	6	15151	-465	-276	-1	3prime_fragment	FALSE	canonical	3	155	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGCTCCCTCAAAATT	NA	False	NA	19	True	AATAAA	-20	NA	110446392	110447681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_110446604_110446885
Isoform_193813_6	chr9	+	879	6	ISM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	30	13	3	0	intron_retention	FALSE	canonical	3	695	junction_3	21.9544984001001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTGTTTCATTTCCT	8512	False	NA	16	True	AATAAA	-16	NA	110485600	110540661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153
Isoform_193814_492	chr9	+	794	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	27	13	0	0	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTGTTTCATTTCCT	8509	False	NA	16	True	AATAAA	-16	NA	110485597	110540661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
Isoform_193819_15	chr9	+	1458	5	FSM	ENSMUSG00000048752.8	ENSMUST00000051097.6	1456	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	8	junction_3	2.54950975679639	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTCCTTTCTGAGCC	NA	False	NA	NA	False	ATTAAA	-16	NA	110687032	110693697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110687528_110690327_110690491_110691329_110691614_110692797_110692965_110693348
Isoform_19382_461	chr11	+	2454	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	86	1	86	-1	multi-exon	FALSE	canonical	3	192	junction_4	17.3205080756888	461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTCTTGTGTTTACTT	NA	False	NA	18	True	GATAAA	-19	NA	5905778	5917779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
Isoform_193820_5	chr9	+	5096	27	FSM	ENSMUSG00000044037.16	ENSMUST00000130386.8	5056	27	-40	0	-8	0	multi-exon	FALSE	canonical	3	8	junction_1	6.41374264174641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	4	True	AATAAA	-17	NA	110709233	110729598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110709298_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
Isoform_193821_5	chr9	+	5236	27	FSM	ENSMUSG00000044037.16	ENSMUST00000155014.2	5150	27	-83	-3	21	0	multi-exon	FALSE	canonical	3	12	junction_1	6.10945527743532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	4	True	AATAAA	-17	NA	110709321	110729598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
Isoform_193822_6	chr9	+	5195	27	FSM	ENSMUSG00000044037.16	ENSMUST00000155014.2	5150	27	-43	-2	-43	-1	multi-exon	FALSE	canonical	3	12	junction_1	6.10945527743532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	110709361	110729597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
Isoform_193823_3	chr9	+	5225	28	NNC	ENSMUSG00000044037.16	novel	5150	27	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	2	5	junction_2	6.89784364229723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	110709306	110729597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_110709526_110711781_110711892_110713085_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483_110728867_110728888
Isoform_193835_6	chr9	+	3324	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	9306	5	17	-5	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCCTTGTTCCACGTG	NA	False	NA	3	True	AATAAA	-14	NA	110789918	110813129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_193836_6	chr9	+	3489	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	9141	5	-148	-5	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCCTTGTTCCACGTG	NA	False	NA	3	True	AATAAA	-14	NA	110789753	110813129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_193843_3	chr9	+	3299	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-115	-5	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	83.1033092000553	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCCTTGTTCCACGTG	NA	False	NA	3	True	AATAAA	-14	NA	110789786	110813129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_193844_10	chr9	+	3156	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	30	-3	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	83.1033092000553	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTTGTTCCACGTGTG	NA	False	NA	5	True	AATAAA	-16	NA	110789931	110813131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_193848_102	chr9	+	1845	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	-7	1	-5	-1	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTTGGATTTTGTTTG	NA	False	NA	45	True	AATGAA	-17	NA	110947173	111053289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
Isoform_193850_44	chr9	+	2950	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	-7	-1104	-5	-341	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAATTGTCCCTTTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	110947173	111054394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
Isoform_193854_13	chr9	+	2860	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	-11	342	-11	-341	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAATTGTCCCTTTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	110947191	111054394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
Isoform_193855_7	chr9	+	3194	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	-4	1	-4	0	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	NA	False	NA	15	True	GATAAA	-20	NA	110947198	111054735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
Isoform_193856_69	chr9	+	1773	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	-29	1447	-5	-1	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTTGGATTTTGTTTG	NA	False	NA	45	True	AATGAA	-17	NA	110947173	111053289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
Isoform_193858_3	chr9	+	4358	2	FSM	ENSMUSG00000046785.9	ENSMUST00000200053.2	578	2	-2226	-1554	-53	2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTGTCTTTCAGTG	NA	False	NA	15	True	NA	NA	NA	111100943	111108163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_111103596_111106457
Isoform_193859_27	chr9	+	2969	5	FSM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	34	2	34	-2	multi-exon	FALSE	canonical	3	6	junction_1	10.8483869768736	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTGCCTTGTTCAATG	NA	False	NA	NA	False	AATAAA	-18	NA	111268182	111318184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_111268421_111296545_111298384_111311685_111311819_111313984_111314153_111317592
Isoform_193860_4	chr9	+	3513	5	FSM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	-18	-490	-18	490	multi-exon	FALSE	canonical	3	6	junction_1	10.8483869768736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGATGGGGTGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	111268130	111318676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_111268421_111296545_111298384_111311685_111311819_111313984_111314153_111317592
Isoform_193866_4	chr9	+	2654	4	ISM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	28970	-494	28970	494	3prime_fragment	FALSE	canonical	3	22	junction_1	4.96655480858378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGGTGTGTCATTTAG	7216	False	NA	NA	False	NA	NA	NA	111297118	111318680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_111298384_111311685_111311819_111313984_111314153_111317592
Isoform_193868_4	chr9	+	3896	21	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-22	16362	combination_of_known_splicesites	FALSE	canonical	3	151	junction_16	20.286140589082	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	113570518	113701159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690
Isoform_193871_308	chr9	+	6323	36	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-24	14	combination_of_known_splicesites	FALSE	canonical	3	90	junction_24	28.274947445773	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGTAGCTCAGCTCTTT	NA	False	NA	29	True	AATAAA	-30	NA	113570516	113748764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
Isoform_193876_12	chr9	+	6426	37	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-3	13	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	49.1547929793169	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	NA	False	NA	28	True	AATAAA	-29	NA	113570537	113748763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_113570944_113590657_113590737_113594991_113595117_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
Isoform_193887_49	chr9	+	3638	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	212	0	212	0	multi-exon	FALSE	canonical	3	95	junction_1	91.3275141660497	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1514	False	NA	20	True	AATAAA	-20	NA	113760213	113806267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_193888_49	chr9	+	3439	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	213	198	213	0	multi-exon	FALSE	canonical	3	95	junction_1	91.3275141660497	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1515	False	NA	17	True	AATAAA	-18	NA	113760214	113806069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_19389_150	chr11	+	4120	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241627	6306642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
Isoform_193893_54	chr9	+	3332	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	212	198	212	0	multi-exon	TRUE	canonical	3	95	junction_1	93.8633522142103	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1514	False	NA	17	True	AATAAA	-18	NA	113760213	113806069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_193894_52	chr9	+	3531	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	212	-1	212	1	multi-exon	FALSE	canonical	3	95	junction_1	93.8633522142103	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGTCACTCATTTCAAA	1514	False	NA	21	True	AATAAA	-21	NA	113760213	113806268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_193902_14	chr9	+	3521	16	FSM	ENSMUSG00000009741.16	ENSMUST00000216558.2	1623	16	-282	-1616	-63	-2	multi-exon	FALSE	canonical	3	224	junction_8	65.0003076915794	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1740	False	NA	15	True	AATAAA	-16	NA	113760439	113806067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_193905_6	chr9	+	3751	16	FSM	ENSMUSG00000009741.16	ENSMUST00000216558.2	1623	16	-508	-1620	212	2	multi-exon	FALSE	canonical	3	224	junction_8	65.0003076915794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAATTCATTATCA	1514	False	NA	19	True	AATAAA	-20	NA	113760213	113806071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_193909_19	chr9	+	3415	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	191	junction_7	75.4601881789331	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1715	False	NA	17	True	AATAAA	-18	NA	113760414	113806069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413_113805526_113805550
Isoform_193912_16	chr9	+	3613	15	FSM	ENSMUSG00000009741.16	ENSMUST00000214095.2	2320	15	-63	-1230	-63	0	multi-exon	FALSE	canonical	3	191	junction_7	65.0304481275769	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1740	False	NA	20	True	AATAAA	-20	NA	113760439	113806267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_193919_6	chr9	+	3879	5	FSM	ENSMUSG00000086596.3	ENSMUST00000135338.3	4083	5	204	0	204	0	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAATGTATTGAATTTC	NA	False	NA	NA	False	AATAAA	-19	NA	113886411	113927796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_113886713_113893023_113893202_113897824_113897944_113911488_113911678_113924704
Isoform_19392_1342	chr11	+	4133	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-6	0	-6	0	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241626	6306642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
Isoform_193920_10	chr9	+	3808	5	FSM	ENSMUSG00000086596.3	ENSMUST00000135338.3	4083	5	277	-2	277	2	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTATTGAATTTCTA	NA	False	NA	NA	False	AATAAA	-21	NA	113886484	113927798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_113886713_113893023_113893202_113897824_113897944_113911488_113911678_113924704
Isoform_193921_4	chr9	+	1270	4	FSM	ENSMUSG00000074039.11	ENSMUST00000124664.8	1285	4	-32	47	-32	-47	multi-exon	FALSE	canonical	3	8	junction_3	6.12825877028341	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAGAAAACAACAAACA	NA	False	NA	NA	False	NA	NA	NA	114197338	114206250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114197553_114197911_114197968_114198056_114198132_114205325
Isoform_193922_111	chr9	+	3184	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	43	-306	43	306	multi-exon	FALSE	canonical	3	40	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114230215	114236650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114230338_114233588
Isoform_193923_24	chr9	+	3237	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	-10	-306	-10	306	multi-exon	FALSE	canonical	3	40	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114230162	114236650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114230338_114233588
Isoform_193929_25	chr9	+	2489	10	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	74	29880	42	-29880	5prime_fragment	FALSE	canonical	3	295	junction_2	41.9046536795139	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGAGTCTGGTTTCTG	NA	False	NA	7	True	AATACA	-14	NA	114230217	114273565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076
Isoform_193933_708	chr9	+	2326	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	72	-2	40	2	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTCCTGTCATTAATA	NA	False	NA	26	True	AATAAA	-17	NA	114230215	114303447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
Isoform_193934_15	chr9	+	2394	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	3	-1	3	1	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	25	True	AATAAA	-16	NA	114230146	114303446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
Isoform_193937_77	chr9	+	2183	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	76.8975265651421	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGTCCTGTCATTAA	NA	False	NA	24	True	AATAAA	-15	NA	114230186	114303445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
Isoform_193938_103	chr9	+	2153	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	42	1	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	76.8975265651421	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	25	True	AATAAA	-16	NA	114230217	114303446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
Isoform_193940_15	chr9	+	1903	12	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	110.549342036909	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	25	True	AATAAA	-16	NA	114230160	114303446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_114230338_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
Isoform_193945_543	chr9	+	2644	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	-32	-11	-32	11	multi-exon	FALSE	canonical	3	336	junction_8	45.3210767744986	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGTGTTGCCTTTTCT	2094	False	NA	14	True	AATAAA	-27	NA	114517825	114553381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
Isoform_193946_936	chr9	+	2607	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	5	-11	5	11	multi-exon	FALSE	canonical	3	336	junction_8	45.3210767744986	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGTGTTGCCTTTTCT	2131	False	NA	14	True	AATAAA	-27	NA	114517862	114553381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
Isoform_193966_2135	chr9	+	3352	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	31	0	31	0	multi-exon	FALSE	canonical	3	606	junction_3	12.8322510366134	2135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	19	True	AATAAA	-15	NA	114560271	114578412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
Isoform_193969_59	chr9	+	3406	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	-23	0	-23	0	multi-exon	FALSE	canonical	3	606	junction_3	12.8322510366134	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	19	True	AATAAA	-15	NA	114560217	114578412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
Isoform_193977_3	chr9	+	970	2	ISM	ENSMUSG00000052724.8	ENSMUST00000150678.2	965	3	990	-9	990	9	3prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTGCTTTCTTTCTTA	NA	False	NA	NA	False	AATAAA	-43	NA	114610157	114611334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_114610550_114610756
Isoform_193979_65	chr9	+	3664	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-141	-1046	-141	1044	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	NA	False	NA	NA	False	AATATA	-10	NA	114807495	115062337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_193980_6	chr9	+	2908	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-433	2	-433	2	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGTTGGTATTTGT	NA	False	NA	4	True	ATTAAA	-14	NA	114807203	115061289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_193985_5	chr9	+	3473	11	NIC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-142	1044	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	22.127132665576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	NA	False	NA	NA	False	AATATA	-10	NA	114807494	115062337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_193986_11	chr9	+	3179	12	FSM	ENSMUSG00000040875.13	ENSMUST00000182384.8	2158	12	23	-1044	23	1044	multi-exon	FALSE	canonical	1	3	junction_1	20.7380354832004	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	NA	False	NA	NA	False	AATATA	-10	NA	114819838	115062337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_114819891_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_193987_12	chr9	+	2188	5	ISM	ENSMUSG00000040875.13	ENSMUST00000046627.6	1872	10	149245	-1046	95985	1044	3prime_fragment	FALSE	canonical	3	73	junction_2	2.54950975679639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	6060	False	NA	NA	False	AATATA	-10	NA	115045591	115062337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_193990_10	chr9	+	1248	5	ISM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-45	8755	-23	70	5prime_fragment	FALSE	canonical	3	140	junction_4	16.3783393541592	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGGGTTGTGTCTTAAT	9620	False	NA	NA	False	AATATA	-25	NA	117869601	117880797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421
Isoform_193991_5	chr9	+	2556	7	FSM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-59	2	21	-2	multi-exon	FALSE	canonical	3	128	junction_5	18.3734409769464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTCTGTGTTCTTTTTA	9606	False	NA	NA	False	AATAAA	-15	NA	117869587	117889550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124
Isoform_193995_49	chr9	+	3146	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-22	-261	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATGTGAAATACTGT	9621	False	NA	NA	False	ATTAAA	-23	NA	117869602	117892646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
Isoform_194002_13	chr9	+	3407	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTATTTTGTGATTC	9620	False	NA	3	True	AATATA	-17	NA	117869601	117892906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
Isoform_194007_14	chr9	+	3144	9	NNC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-22	-267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	67.1294225731162	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAATTGGATGTGAAA	9621	False	NA	NA	False	ATTAAA	-17	NA	117869602	117892640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888739_117890781
Isoform_194009_125	chr9	+	3093	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	36	267	-22	-267	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAATTGGATGTGAAA	9621	False	NA	NA	False	ATTAAA	-17	NA	117869602	117892640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
Isoform_194010_8	chr9	+	3125	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	7	264	7	-264	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTGGATGTGAAATAC	9592	False	NA	NA	False	ATTAAA	-20	NA	117869573	117892643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
Isoform_194011_39	chr9	+	3359	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	36	1	-22	-1	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTATTTTGTGATTC	9621	False	NA	3	True	AATATA	-17	NA	117869602	117892906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
Isoform_194018_4	chr9	+	3406	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	-11	1	-11	-1	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTATTTTGTGATTC	9574	False	NA	3	True	AATATA	-17	NA	117869555	117892906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
Isoform_194023_4	chr9	+	3245	6	FSM	ENSMUSG00000032446.15	ENSMUST00000035020.15	3560	6	290	25	-227	-25	multi-exon	FALSE	canonical	3	9	junction_5	4.35430821141545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGTATAGCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	118307701	118315175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313341
Isoform_194024_11	chr9	+	3031	6	FSM	ENSMUSG00000032446.15	ENSMUST00000035020.15	3560	6	514	15	-3	-15	multi-exon	FALSE	canonical	3	9	junction_5	4.35430821141545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTCTTCTGTACTATG	NA	False	NA	NA	False	AATAAA	-27	NA	118307925	118315185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313341
Isoform_194027_3	chr9	+	7741	26	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	64.5947366276851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATAGTGTTCATTGTGC	NA	False	NA	5	True	AATAAA	-13	NA	118335338	118411585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
Isoform_194028_6	chr9	+	7695	25	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	63.0103607000909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335321	118411587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
Isoform_194032_34	chr9	+	7660	25	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_24	53.463318161978	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118335321	118411586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
Isoform_194033_62	chr9	+	7590	24	FSM	ENSMUSG00000038708.11	ENSMUST00000084820.6	7583	24	-6	-1	-6	1	multi-exon	FALSE	canonical	3	96	junction_12	49.6666772391441	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGTTCATTGTGCTTC	NA	False	NA	8	True	AATAAA	-16	NA	118335328	118411588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
Isoform_194035_8	chr9	+	7652	25	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_12	56.5700156148703	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335327	118411587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
Isoform_194036_24	chr9	+	7575	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_12	53.3849663424073	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118335338	118411586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
Isoform_194040_10	chr9	+	7575	24	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	57.6555182976455	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATAGTGTTCATTGTGC	NA	False	NA	5	True	AATAAA	-13	NA	118335321	118411585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
Isoform_194043_10	chr9	+	7505	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_9	57.795396453694	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335325	118411587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
Isoform_19405_29	chr11	+	4164	23	FSM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	6	-64	4	0	multi-exon	FALSE	canonical	3	18	junction_1	146.072267860866	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241671	6306642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6241770_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
Isoform_194058_9	chr9	+	3760	28	FSM	ENSMUSG00000039115.14	ENSMUST00000044165.14	7020	28	7	3253	7	27	multi-exon	TRUE	canonical	2	4	junction_19	2.10688335604858	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTGAAATCTTGGAAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	118435764	118726818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_118436184_118455515_118455644_118457206_118457314_118465570_118465695_118481564_118481633_118487533_118487664_118490415_118490502_118492937_118493007_118497679_118497818_118500766_118500873_118501877_118501973_118510003_118510095_118510802_118510849_118518337_118518493_118527381_118527543_118598159_118598310_118613169_118613247_118636232_118636384_118661801_118661889_118663363_118663444_118670160_118670251_118672556_118672666_118679766_118679875_118698358_118698485_118700888_118701009_118706189_118706292_118716831_118716952_118726301
Isoform_194060_3	chr9	+	4621	8	FSM	ENSMUSG00000047409.14	ENSMUST00000073109.12	4589	8	89	-121	89	121	multi-exon	FALSE	canonical	0	0	junction_2	3.56284683238284	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCGTGGTTGATCTGC	NA	False	NA	NA	False	AATAAA	-15	NA	118755609	118873187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_118756009_118840302_118840458_118849079_118849113_118856004_118856107_118859263_118859321_118862603_118862697_118866428_118866615_118869591
Isoform_194062_18	chr9	+	2706	20	FSM	ENSMUSG00000038775.15	ENSMUST00000051386.13	2909	20	10	193	10	0	multi-exon	TRUE	canonical	2	4	junction_1	8.09945109456443	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	4717	False	NA	3	True	AATAAA	-16	NA	118881855	118900394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_118881897_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
Isoform_194063_5	chr9	+	2769	20	NIC	ENSMUSG00000038775.15	novel	360	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.42532786213614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	4787	False	NA	3	True	AATAAA	-16	NA	118881925	118900394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_118882030_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
Isoform_194065_98	chr9	+	1697	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	61	4	-59	-3	multi-exon	TRUE	canonical	3	245	junction_2	23.8777880116768	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGCTTGTCATTTCC	7789	False	NA	24	True	AGTAAA	-15	NA	119170420	119179361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
Isoform_194066_518	chr9	+	1598	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	160	4	-3	-3	multi-exon	FALSE	canonical	3	245	junction_2	23.8777880116768	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGCTTGTCATTTCC	7888	False	NA	24	True	AGTAAA	-15	NA	119170519	119179361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
Isoform_194070_11	chr9	+	1570	11	NIC	ENSMUSG00000036138.17	novel	1762	12	NA	NA	-18	-3	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	84.7362968272747	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGCTTGTCATTTCC	7873	False	NA	24	True	AGTAAA	-15	NA	119170504	119179361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
Isoform_194072_137	chr9	+	3187	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	206	-10	0	1	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCACCTCTCCTTGCTT	NA	False	NA	21	True	AATAAA	-21	NA	119186652	119222396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
Isoform_194073_3	chr9	+	5482	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	169	-2268	-19	1791	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAATGAAAAGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	119186615	119224654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
Isoform_194074_3	chr9	+	3259	19	NIC	ENSMUSG00000035769.10	novel	3702	20	NA	NA	-20	5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	27.189152248645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTCCTTGCTTCCCT	NA	False	NA	25	True	AATAAA	-25	NA	119186614	119222400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119199344_119199445_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
Isoform_194075_53	chr9	+	3115	18	FSM	ENSMUSG00000035769.10	ENSMUST00000215822.2	3134	18	19	0	1	0	multi-exon	FALSE	canonical	3	22	junction_2	17.3265002945415	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCACCTCTCCTTGCT	NA	False	NA	20	True	AATAAA	-20	NA	119186653	119222395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
Isoform_194080_56	chr9	+	1994	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-313	1494	13	0	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	119231196	119262567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_194087_20	chr9	+	3491	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-313	-3	13	3	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAAAGTTTGT	NA	False	NA	NA	False	AATAGA	-3	NA	119231196	119264064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_194088_3	chr9	+	10626	11	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	13	7139	intron_retention	FALSE	non_canonical	0	0	junction_9	56.687211961782	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCGTCTGTATTTTTT	NA	False	NA	6	True	NA	NA	NA	119231196	119271200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261693_119261778_119261910_119262332
Isoform_19409_76	chr11	+	4372	23	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	139.064294839378	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241985	6306642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
Isoform_194091_4	chr9	+	8799	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-338	-5286	-12	5286	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTTTTACCAGTTCAA	NA	False	NA	21	True	TTTAAA	-2	NA	119231171	119269347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_194093_34	chr9	+	2022	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-312	1465	14	15	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231197	119262596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_194095_3	chr9	+	2066	10	FSM	ENSMUSG00000061393.15	ENSMUST00000165044.3	2093	10	14	13	14	1	multi-exon	FALSE	canonical	3	128	junction_3	24.155872429691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119231197	119262568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_194097_27	chr9	+	1970	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	40.556133938037	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	119231196	119262567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_194100_6	chr9	+	3506	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	-12	17	combination_of_known_junctions	TRUE	canonical	3	57	junction_3	40.556133938037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTTCTAGTCAGT	NA	False	NA	NA	False	AATAGA	-17	NA	119231171	119264078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_194103_55	chr9	+	2674	8	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	21.0092302358283	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCCTGACTGCATATTT	NA	False	NA	NA	False	AAAAAG	-4	NA	119274037	119293305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_194106_13	chr9	+	3953	8	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	4	-7	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	21.0092302358283	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGACCGGTGATTGGC	NA	False	NA	NA	False	NA	NA	NA	119274029	119294576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_194107_30	chr9	+	2567	7	FSM	ENSMUSG00000042787.16	ENSMUST00000164213.5	2571	7	0	4	0	-4	multi-exon	FALSE	canonical	3	15	junction_2	23.8706002345051	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGCACGCCTGACTGCA	NA	False	NA	NA	False	NA	NA	NA	119274025	119293300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_194109_7	chr9	+	3849	7	FSM	ENSMUSG00000042787.16	ENSMUST00000164213.5	2571	7	2	-1280	2	1	multi-exon	FALSE	canonical	3	15	junction_2	23.8706002345051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGATTGGCCACAGTGA	NA	False	NA	NA	False	NA	NA	NA	119274027	119294584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_194111_4	chr9	+	2460	6	NIC	ENSMUSG00000042787.16	novel	2571	7	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	32.041223447303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGACTGCATATTTATT	NA	False	NA	NA	False	AAAAAG	-7	NA	119274025	119293308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119291441
Isoform_194114_4	chr9	+	3919	7	FSM	ENSMUSG00000042787.16	ENSMUST00000214462.2	2624	7	-25	-1270	2	-8	multi-exon	FALSE	canonical	2	5	junction_1	29.590257405662	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGACCGGTGATTGG	NA	False	NA	NA	False	NA	NA	NA	119274027	119294575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119274217_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_194115_53	chr9	+	2540	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	17	1275	0	3	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGACTGCATATTTATT	NA	False	NA	NA	False	AAAAAG	-7	NA	119274025	119293308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_194118_9	chr9	+	3806	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	19	7	2	-7	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGACCGGTGATTGGC	NA	False	NA	NA	False	NA	NA	NA	119274027	119294576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_194123_8	chr9	+	4275	18	ISM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	9	2	-8	-2	intron_retention	FALSE	canonical	3	235	junction_17	23.4534066552606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCAGTGTGCTGGACAT	NA	False	NA	27	True	AATAAA	-15	NA	119723952	119755650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143
Isoform_194124_375	chr9	+	3823	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	18	4	1	-4	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTCAGTGTGCTGGAC	NA	False	NA	25	True	AATAAA	-13	NA	119723961	119755648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
Isoform_194130_7	chr9	+	3968	19	NIC	ENSMUSG00000032512.8	novel	2924	6	NA	NA	-48	-5	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	66.449646767726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTCAGTGTGCTGGA	NA	False	NA	24	True	AATAAA	-12	NA	119724174	119755647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119724383_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
Isoform_194137_3	chr9	+	1664	8	FSM	ENSMUSG00000032519.12	ENSMUST00000144768.8	961	8	-37	-666	13	-187	multi-exon	FALSE	non_canonical	0	0	junction_4	67.8187861517887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1773	False	NA	-3	True	AATAAA	-22	NA	119939452	119953383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949022_119949322_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_194138_18	chr9	+	1719	8	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	9	-186	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	64.126469430592	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGACATCACCAGGG	1769	False	NA	-2	True	AATAAA	-23	NA	119939448	119953384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949072_119949322_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_194140_28	chr9	+	1961	7	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	-14	-187	intron_retention	FALSE	canonical	3	13	junction_3	53.5184288093571	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1777	False	NA	-3	True	AATAAA	-22	NA	119939456	119953383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_194141_189	chr9	+	1596	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	9	186	9	-186	multi-exon	FALSE	canonical	3	111	junction_3	17.3173002771474	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGACATCACCAGGG	1769	False	NA	-2	True	AATAAA	-23	NA	119939448	119953384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_194142_9	chr9	+	1975	7	NNC	ENSMUSG00000032519.12	novel	1791	7	NA	NA	-10	-187	intron_retention	FALSE	canonical	3	7	junction_3	55.748442927932	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1781	False	NA	-3	True	AATAAA	-22	NA	119939460	119953383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948930_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_194143_3	chr9	+	2140	8	NNC	ENSMUSG00000032519.12	novel	961	8	NA	NA	-8	-188	intron_retention	FALSE	canonical	0	0	junction_3	70.6618853471681	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAGACATCACCAG	1783	False	NA	-4	True	AATAAA	-21	NA	119939462	119953382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948355_119948542_119948948_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_194145_4	chr9	+	1469	6	NIC	ENSMUSG00000032519.12	novel	1791	7	NA	NA	13	-187	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	61.2359371611148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1773	False	NA	-3	True	AATAAA	-22	NA	119939452	119953383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_119939639_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_194147_8932	chr9	+	1030	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	98	810	-2	0	multi-exon	FALSE	canonical	3	2998	junction_3	1065.2190176464	8932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956852	119960625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
Isoform_194148_138	chr9	+	1055	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	73	810	-27	0	multi-exon	FALSE	canonical	3	2998	junction_3	1065.2190176464	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956827	119960625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
Isoform_194172_3	chr9	+	995	3	FSM	ENSMUSG00000032517.17	ENSMUST00000215512.2	498	3	25	-522	0	522	multi-exon	FALSE	canonical	3	18	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCTGGCGTGGCTTCTG	NA	False	NA	4	True	NA	NA	NA	119978807	119997726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119978864_119983752_119983832_119996866
Isoform_194173_14	chr9	+	782	4	FSM	ENSMUSG00000032517.17	ENSMUST00000068698.15	1536	4	35	719	0	521	multi-exon	FALSE	canonical	3	15	junction_3	2.44948974278318	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACCTGGCGTGGCTTCT	NA	False	NA	3	True	NA	NA	NA	119978807	119997725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_119997288
Isoform_194174_3	chr9	+	2790	7	NNC	ENSMUSG00000032517.17	novel	2609	6	NA	NA	0	-161	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	6.58280588604383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTGGAGATTGCTT	NA	False	NA	15	True	AATAAA	-17	NA	119978807	120010389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_119978864_119983752_119983832_119996866_119997077_119997288_119997631_120002216_120002442_120008392_120008472_120008590
Isoform_194175_6	chr9	+	3287	4	FSM	ENSMUSG00000032517.17	ENSMUST00000093773.8	3286	4	2	-3	2	3	multi-exon	FALSE	canonical	3	11	junction_3	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTATTTGCTTTTAA	NA	False	NA	17	True	NA	NA	NA	119978809	120005160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_120002216
Isoform_194176_8	chr9	+	2447	6	FSM	ENSMUSG00000032517.17	ENSMUST00000174193.8	2609	6	2	160	2	-160	multi-exon	FALSE	canonical	2	7	junction_4	5.38144961882948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATCTGGAGATTGCTTG	NA	False	NA	16	True	AATAAA	-18	NA	119978809	120010390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_120002216_120002442_120008392_120008472_120008590
Isoform_194177_299	chr9	+	1047	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	-14	2	-14	-2	multi-exon	FALSE	canonical	3	407	junction_2	26.9608770051883	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGCAATGCACTTTGT	NA	False	NA	32	True	AATAAA	-34	NA	120321542	120324394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
Isoform_194183_43	chr9	+	2925	11	FSM	ENSMUSG00000041608.9	ENSMUST00000047687.9	3453	11	21	507	21	-507	multi-exon	FALSE	canonical	3	4	junction_7	3.21869538788622	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGTATTTGTTAACTTAA	NA	False	NA	18	True	AATAAA	-20	NA	120368904	120396886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_120368950_120369717_120369770_120373024_120373153_120383134_120383253_120384710_120384862_120386457_120386618_120387401_120387636_120389546_120389820_120389986_120390098_120390964_120391103_120395371
Isoform_194184_4	chr9	+	2787	10	NIC	ENSMUSG00000041608.9	novel	3453	11	NA	NA	-8	-514	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	4.371625682868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAGCGTGTATTTGTT	NA	False	NA	11	True	AATAAA	-13	NA	120368875	120396879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_120368950_120369717_120369770_120373024_120373153_120383134_120383253_120384710_120384862_120387401_120387636_120389546_120389820_120389986_120390098_120390964_120391103_120395371
Isoform_194190_9927	chr9	+	713	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	73	223	3	-1	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	9927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTCATGTGTGGACTC	NA	False	NA	15	True	AATAAA	-19	NA	120400582	120403497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
Isoform_194191_1620	chr9	+	755	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	33	221	33	1	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGTGTGGACTCTA	NA	False	NA	17	True	AATAAA	-21	NA	120400542	120403499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
Isoform_1942_465	chr10	-	3196	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	1	7	1	-7	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGAGAAAGTTTTCTGT	NA	False	NA	-12	True	AATAAA	-22	NA	40178181	40163460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
Isoform_194211_965	chr9	+	3533	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	88	2	2	-1	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGTCATTTTGTTTG	NA	False	NA	25	True	ATTAAA	-14	NA	120762553	120789571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
Isoform_194212_696	chr9	+	3627	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	-5	1	-5	0	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTCATTTTGTTTGT	NA	False	NA	26	True	ATTAAA	-15	NA	120762460	120789572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
Isoform_194214_63	chr9	+	3673	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	-52	2	-52	-1	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGTCATTTTGTTTG	NA	False	NA	25	True	ATTAAA	-14	NA	120762413	120789571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
Isoform_194218_46	chr9	+	3492	15	NIC	ENSMUSG00000006932.18	novel	2222	14	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	170.049332577944	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTCATTTTGTTTGT	NA	False	NA	26	True	ATTAAA	-15	NA	120762918	120789572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_120763028_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
Isoform_194251_25	chr9	+	3541	14	FSM	ENSMUSG00000032536.13	ENSMUST00000211439.2	3533	14	-9	1	-9	-1	multi-exon	FALSE	canonical	3	209	junction_1	23.6693195168457	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCGCCTTTCTTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	121126590	121284947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
Isoform_194252_144	chr9	+	4500	15	ISM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	14	10395	-8	-6	5prime_fragment	FALSE	canonical	3	209	junction_1	22.8924949826491	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTTTTAGGTCCTAG	NA	False	NA	3	True	ATTAAA	-13	NA	121126591	121291670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
Isoform_194253_221	chr9	+	5256	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	13	-1916	-9	-1	multi-exon	FALSE	canonical	3	114	junction_15	40.0713718725726	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCTTTTGTCTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	121126590	121303981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
Isoform_194257_28	chr9	+	5397	17	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	10	-1	combination_of_known_splicesites	TRUE	canonical	3	22	junction_15	60.0020507462037	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCTTTTGTCTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	121126587	121303981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289782_121298050_121298154_121301302
Isoform_194260_133	chr9	+	5195	17	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_15	49.7895179103996	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTCTTTTTTTAG	NA	False	NA	10	True	AATAAA	-18	NA	121126590	121303983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
Isoform_194270_10	chr9	+	3095	3	ISM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	93249	3	5969	-1	3prime_fragment	FALSE	canonical	3	114	junction_1	62	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCTTTTGTCTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	121289330	121303981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_121289644_121298050_121298154_121301302
Isoform_194272_3	chr9	+	550	3	FSM	ENSMUSG00000032526.12	ENSMUST00000215104.2	315	3	-68	-167	3	0	multi-exon	FALSE	canonical	2	7	junction_1	206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	11	True	AATAAA	-16	NA	121539397	121541987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121539514_121539704_121539782_121541630
Isoform_194273_6	chr9	+	2383	2	FSM	ENSMUSG00000032526.12	ENSMUST00000215966.2	2316	2	26	-93	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	11	True	AATAAA	-16	NA	121539437	121541987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121539538_121539704
Isoform_194274_146	chr9	+	548	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	29	0	-7	0	multi-exon	FALSE	canonical	3	377	junction_1	21	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	11	True	AATAAA	-16	NA	121539423	121541987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121539538_121539704_121539782_121541630
Isoform_194277_29	chr9	+	698	2	FSM	ENSMUSG00000032526.12	ENSMUST00000214535.2	1175	2	11	466	4	1	multi-exon	FALSE	canonical	3	419	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTCCCATGTCAACTA	NA	False	NA	12	True	AATAAA	-17	NA	121539441	121541988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121539782_121541630
Isoform_194280_4	chr9	+	4613	18	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	11.909113720986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCAGTCTGTTGTGTTTT	NA	False	NA	2	True	AAGAAA	-5	NA	121548231	121583462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
Isoform_194281_3	chr9	+	7048	18	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_16	13.0067855594007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTGGTCTTTCTTTGC	NA	False	NA	8	True	AATACA	-18	NA	121548245	121585908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
Isoform_194283_4	chr9	+	4541	17	FSM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	33	2448	-6	-1	multi-exon	FALSE	canonical	3	17	junction_5	11.4065496535981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCAGTCTGTTGTGTTT	NA	False	NA	1	True	AAGAAA	-4	NA	121548274	121583461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
Isoform_194284_9	chr9	+	3684	6	FSM	ENSMUSG00000013419.8	ENSMUST00000093772.4	6353	6	-21	2690	-21	-2	multi-exon	FALSE	canonical	2	7	junction_1	5.5281099844341	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGTGGGCAGGCCCA	2046	False	NA	NA	False	AATAAA	-18	NA	121589077	121598118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121589292_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
Isoform_194285_3	chr9	+	4082	6	NNC	ENSMUSG00000013419.8	novel	6353	6	NA	NA	-19	399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8.16333265278342	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAACGAAAAAAAAAAA	2048	False	NA	NA	False	NA	NA	NA	121589079	121598519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_121589292_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596449_121596560
Isoform_194286_4	chr9	+	3958	6	FSM	ENSMUSG00000013419.8	ENSMUST00000093772.4	6353	6	-295	2690	-295	-2	multi-exon	FALSE	canonical	2	7	junction_1	5.5281099844341	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGTGGGCAGGCCCA	1772	False	NA	NA	False	AATAAA	-18	NA	121588803	121598118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121589292_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
Isoform_194289_5	chr9	+	3415	9	FSM	ENSMUSG00000038145.18	ENSMUST00000134949.8	1664	9	-68	-1683	-4	597	multi-exon	FALSE	canonical	2	2	junction_3	11.6833214455479	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8232	False	NA	NA	False	NA	NA	NA	121946344	121997138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_121946474_121960958_121961009_121961693_121961817_121963052_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
Isoform_194296_47	chr9	+	2995	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	162	0	-19	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180834	122210589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_194297_17	chr9	+	1361	8	NNC	ENSMUSG00000032540.17	novel	1386	8	NA	NA	-47	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.0783379868312	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTGATTTTTCAGCT	NA	False	NA	18	True	AATAAA	-23	NA	122180747	122208893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_122180775_122180799_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_194298_28	chr9	+	3081	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	76	0	-46	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180748	122210589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_194301_7	chr9	+	3114	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	43	0	43	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180715	122210589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_194302_5	chr9	+	2909	6	NIC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	35.2363448728724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTGGGTGAGCTGTGTG	NA	False	NA	3	True	AATAAA	-16	NA	122180833	122210588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_122180905_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_194303_4	chr9	+	1244	6	NIC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	35.2363448728724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACTGAAAAATTGTGATT	NA	False	NA	10	True	AATAAA	-15	NA	122180795	122208885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_122180905_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_194304_4	chr9	+	2607	5	FSM	ENSMUSG00000032540.17	ENSMUST00000111497.5	2576	5	-33	2	-33	-2	multi-exon	FALSE	canonical	2	13	junction_1	33.7073804974519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGTGGGTGAGCTGTGT	NA	False	NA	2	True	AATAAA	-15	NA	122180761	122210587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122180905_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_194305_6	chr9	+	2537	5	FSM	ENSMUSG00000032540.17	ENSMUST00000111497.5	2576	5	39	0	-20	0	multi-exon	FALSE	canonical	2	13	junction_1	33.7073804974519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180833	122210589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122180905_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_194306_22	chr9	+	3022	12	NNC	ENSMUSG00000046603.17	novel	3049	11	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	3	16	junction_4	5.75246982529323	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTGCGTTCCAGGATT	NA	False	NA	18	True	AATAAA	-18	NA	122634606	122665395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800_122664499_122664518
Isoform_194308_8	chr9	+	2948	12	NNC	ENSMUSG00000046603.17	novel	2909	11	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	16	junction_4	5.75246982529323	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCGTTCCAGGATTTC	NA	False	NA	20	True	AATAAA	-20	NA	122634606	122665397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647914_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800_122664499_122664518
Isoform_194309_7	chr9	+	2837	6	NIC	ENSMUSG00000063488.7	novel	4722	5	NA	NA	1170	1075	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	2.92574776766556	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTGTTCCACAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	122715919	122725540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_122716131_122717488_122718015_122719723_122719872_122721382_122721457_122721749_122721844_122723756
Isoform_194310_6	chr9	+	2847	6	NNC	ENSMUSG00000063488.7	novel	4722	5	NA	NA	1130	1076	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	2.68328157299975	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTGTTCCACAATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	122715879	122725541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_122716131_122717488_122718015_122719723_122719872_122721382_122721457_122721749_122721813_122723756
Isoform_194312_4	chr9	+	2276	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	-15	-251	-15	251	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGAATTGAGTTTATTT	4859	False	NA	NA	False	TATAAA	-19	NA	122752121	122760344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
Isoform_194313_174	chr9	+	2017	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	-15	8	-15	-8	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAAGGACTTTGTTTT	4859	False	NA	3	True	AATAAA	-14	NA	122752121	122760085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
Isoform_194321_397	chr9	+	4820	35	FSM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	31	7	0	1	multi-exon	FALSE	canonical	3	157	junction_12	27.7337969778696	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAATGTGTATAAATAC	NA	False	NA	1	True	AATAAA	-11	NA	122780141	122847791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
Isoform_194330_13	chr9	+	1014	3	FSM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	25	2	-24	-2	multi-exon	FALSE	canonical	3	26	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTGGATATGGAATT	NA	False	NA	NA	False	AATAAA	-14	NA	122850415	122852550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122850636_122851230_122851378_122851903
Isoform_194333_1156	chr9	+	1022	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	31	0	-1	0	multi-exon	FALSE	canonical	3	1140	junction_3	103.377058995362	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	False	NA	15	True	AATAAA	-20	NA	122942310	122965194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
Isoform_194337_41	chr9	+	1013	8	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	451.937642438712	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCATTGGTGTTGTTAGC	NA	False	NA	9	True	AATAAA	-14	NA	122942309	122965188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_122942388_122947959_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
Isoform_194341_13	chr9	+	994	5	ISM	ENSMUSG00000035202.9	ENSMUST00000217116.2	3756	21	-10	67356	-3	-8	5prime_fragment	FALSE	canonical	3	41	junction_4	7.58287544405155	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTAACCTGCTGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	123196008	123224375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015
Isoform_194342_7	chr9	+	2054	14	ISM	ENSMUSG00000035202.9	ENSMUST00000038863.9	3894	21	18	20947	-2	-19876	5prime_fragment	FALSE	canonical	3	28	junction_9	7.36776924642996	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTAGAGGCCATTGTAG	NA	False	NA	NA	False	AATAAA	-17	NA	123196009	123270782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015_123224077_123238678_123238769_123240937_123241082_123247243_123247352_123247699_123247860_123256511_123256617_123260950_123261067_123265181_123265466_123267199_123267299_123270528
Isoform_194348_63	chr9	+	4869	8	FSM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	-24	3	-24	-3	multi-exon	FALSE	canonical	3	33	junction_2	3.69776545872708	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCCCAAGACTGTCTTC	NA	False	NA	4	True	AATAAA	-20	NA	123307746	123350614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
Isoform_194349_550	chr9	+	3489	20	FSM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	-54	-2	-10	0	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGTTGGTACTGTTTCT	NA	False	NA	19	True	AATAAA	-20	NA	123358892	123421665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
Isoform_194350_55	chr9	+	3564	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	-7	1	-7	-1	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGTTGGTACTGTTTC	NA	False	NA	18	True	AATAAA	-19	NA	123358816	123421664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
Isoform_194355_12	chr9	+	3032	3	NNC	ENSMUSG00000032536.13	novel	4827	16	NA	NA	5971	1	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	85	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTCTTTTTTTAG	NA	False	NA	10	True	AATAAA	-18	NA	121289332	121303983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_121289581_121298050_121298154_121301302
Isoform_194365_4	chr9	+	3651	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-652	-4	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTGTTCCACGTGT	NA	False	NA	4	True	AATAAA	-15	NA	110782214	110813130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_194369_7	chr9	+	4993	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	72.8316380428176	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTAACATAAGTCCCT	NA	False	NA	NA	False	AATAAA	-17	NA	56979345	57035643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_56979501_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_194370_7	chr9	+	4793	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	16	-211	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	72.8316380428176	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56979339	57035437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_56979501_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_194373_15	chr9	+	2505	8	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	49455	1044	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	21.4466590329	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	94	False	NA	NA	False	AATATA	-10	NA	114999061	115062337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_114999099_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_194381_6	chr9	+	3288	21	NNC	ENSMUSG00000023259.18	novel	2659	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	10.09405765785	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCAGGCTCTGCTGTGGC	NA	False	NA	13	True	AATAAA	-13	NA	108731242	108742111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_108732016_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
Isoform_194383_19	chr9	+	2436	2	NNC	ENSMUSG00000035274.14	novel	409	2	NA	NA	-58	-1055	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCATGTTGTGTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	85725355	85728038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_85725457_85725703
Isoform_194385_15	chr9	+	2338	7	NNC	ENSMUSG00000032392.12	novel	2518	6	NA	NA	-69	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	22.6255754991264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCAAGTTGTCTGTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	65122357	65146498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_65122390_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
Isoform_194387_3	chr9	+	684	2	Antisense	novelGene_ENSMUSG00000092212.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACCTGCTTATGTTCT	658	False	NA	NA	False	NA	NA	NA	119053536	119058311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_119053682_119057772
Isoform_194389_10	chr9	+	708	2	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	48004	-2	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTGCCTTGTTCAATG	4038	False	NA	NA	False	AATAAA	-18	NA	111316152	111318184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_111316269_111317592
Isoform_194390_3	chr9	+	813	2	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	47896	-5	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGATCTGCCTTGTTCA	3930	False	NA	NA	False	AATAAA	-15	NA	111316044	111318181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_111316269_111317592
Isoform_194391_3	chr9	+	3105	12	NNC	ENSMUSG00000046603.17	novel	3049	11	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	3	11	junction_1	7.36644166541196	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGCGTTCCAGGATTT	NA	False	NA	19	True	AATAAA	-19	NA	122634622	122665396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_122634852_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800_122664499_122664518
Isoform_194396_3	chr9	+	4363	16	NNC	ENSMUSG00000032235.16	novel	626	4	NA	NA	152	-49	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	33.8830668951649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTGTTTGTCATTTC	4855	False	NA	20	True	AATAAA	-14	NA	69305390	69340355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_69305782_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
Isoform_194400_4	chr9	+	6631	22	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-83733	77	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_1	7.18653313520513	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCCTCCCACTCATTAC	NA	False	NA	NA	False	AATAAA	-14	NA	31943698	32172591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_31944029_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32167355_32168008_32168995_32170197
Isoform_194404_3	chr9	+	8460	38	NNC	ENSMUSG00000053646.14	novel	799	6	NA	NA	-590	-8	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	5.06524270995357	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGAAGCTAAGTCTTCA	9213	False	NA	NA	False	AATAAA	-16	NA	108923866	108948977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_108923943_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934477_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
Isoform_194405_5	chr9	+	2500	2	NNC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	33	3	intron_retention	FALSE	canonical	3	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGGATTTCTTTTTTC	NA	False	NA	6	True	AATAAA	-17	NA	78083228	78086164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_78083417_78083852
Isoform_194406_4	chr9	+	1556	4	NNC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	-10	3	intron_retention	FALSE	canonical	3	3	junction_1	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGGATTTCTTTTTTC	NA	False	NA	6	True	AATAAA	-17	NA	78083185	78086164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_78083417_78083852_78084025_78084280_78084376_78085106
Isoform_194409_5	chr9	+	987	3	NNC	ENSMUSG00000111147.2	novel	3468	7	NA	NA	20176	200	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAAATGGTTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	60959669	60966598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_60959709_60960349_60960452_60965752
Isoform_194410_3	chr9	+	3291	13	NNC	ENSMUSG00000040875.13	novel	1872	10	NA	NA	17616	1044	at_least_one_novel_splicesite	TRUE	non_canonical	1	1	junction_1	22.6654411433403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	NA	False	NA	NA	False	AATATA	-10	NA	114863346	115062337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_114863534_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179_115061636_115061658
Isoform_194413_7	chr9	+	5986	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	16970	13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41.8751886989352	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	NA	False	NA	28	True	AATAAA	-29	NA	113587769	113748763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_113587861_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
Isoform_194419_3	chr9	+	1189	2	Intergenic	novelGene_11543	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTTTCTTTGGGCATT	NA	False	NA	NA	False	NA	NA	NA	86607319	86609708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_86607367_86608566
Isoform_194421_4	chr9	+	3424	7	NNC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	157	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	37.1692824191637	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122181010	122210589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_122181510_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_194423_4	chr9	+	2827	10	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-2378	1044	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	29.6739483364877	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	NA	False	NA	NA	False	AATATA	-10	NA	114947228	115062337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_114947401_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179_115061635_115061658
Isoform_194424_3	chr9	+	3101	22	NNC	ENSMUSG00000035919.17	novel	3045	22	NA	NA	-4350	3	intron_retention	FALSE	canonical	0	0	junction_1	18.563001751161	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAACTGGACTGAATTTA	8482	False	NA	0	True	AATAAA	-17	NA	22397774	22799573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_+_22397838_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
Isoform_194425_5	chr9	+	178	1	Intergenic	novelGene_11082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	8057251	8057429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_8057300_8057400
Isoform_194426_9	chr9	-	203	1	Intergenic	novelGene_11208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTTAGAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	43080171	43079968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_43080000_43080200
Isoform_194428_3	chr9	+	176	1	Intergenic	novelGene_11209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAATGAACAAA	NA	False	NA	NA	False	NA	NA	NA	43119045	43119221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_43119000_43119200
Isoform_194430_5	chr9	+	174	1	Intergenic	novelGene_11210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAAGAATAC	NA	False	NA	NA	False	NA	NA	NA	43279529	43279703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_43279500_43279700
Isoform_194431_12	chr9	-	196	1	Intergenic	novelGene_11211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTTTACACACCCAGCC	NA	False	NA	NA	False	NA	NA	NA	43389109	43388913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_43388900_43389100
Isoform_194432_8	chr9	-	176	1	Intergenic	novelGene_11212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAAATTCAGTCCCTC	NA	False	NA	NA	False	NA	NA	NA	43637522	43637346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_43637300_43637500
Isoform_194436_6	chr9	-	172	1	Intergenic	novelGene_11213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCCATTTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	43724411	43724239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_43724200_43724400
Isoform_194437_6	chr9	+	231	1	Intergenic	novelGene_11214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCTTAACTATATACAAA	NA	False	NA	NA	False	AATAAA	-28	NA	43973639	43973870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_43973600_43973900
Isoform_194438_3	chr9	+	2776	1	NIC	ENSMUSG00000032010.16	novel	3867	13	NA	NA	2	-6075	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43978376	43981152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_43978400_43981200
Isoform_194439_4	chr9	+	1979	1	NIC	ENSMUSG00000032010.16	novel	2057	12	NA	NA	1	-5571	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAGAAAAGAAAAAAA	2260	False	NA	NA	False	NA	NA	NA	43996247	43998226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_43996200_43998200
Isoform_19444_67	chr11	+	4028	20	FSM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	4	84	4	0	multi-exon	TRUE	canonical	3	65	junction_1	72.0482679083075	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4627	False	NA	20	True	ATTAAA	-20	NA	6339077	6356074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_194441_1713	chr9	-	2719	1	FSM	ENSMUSG00000053128.16	ENSMUST00000056328.6	2724	1	4	1	4	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1713	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCCTTGGGAGTGG	9266	False	NA	NA	False	AATAAA	-19	NA	44024797	44022078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44022100_44024800
Isoform_194449_56	chr9	+	215	1	Genic_Genomic	ENSMUSG00000097467.3	novel	NA	NA	NA	NA	3628	4	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTCTTTTTAAAAA	800	False	NA	NA	False	NA	NA	NA	44033046	44033261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_44033000_44033300
Isoform_19445_20	chr11	+	4098	20	FSM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	18	0	18	0	multi-exon	FALSE	canonical	3	65	junction_1	72.0482679083075	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4641	False	NA	15	True	AATAAA	-18	NA	6339091	6356158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_194451_4	chr9	-	172	1	Intergenic	novelGene_11215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAAAAATACACAT	6073	False	NA	NA	False	NA	NA	NA	44142187	44142015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44142000_44142200
Isoform_194452_244	chr1	+	171	1	Intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAAATATA	1086	False	NA	NA	False	NA	NA	NA	94017996	94018167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_94018000_94018200
Isoform_194454_4	chr9	+	172	1	Antisense	novelGene_ENSMUSG00000032119.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAGAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	44206101	44206273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_44206100_44206300
Isoform_194455_143	chr9	-	177	1	Intergenic	novelGene_11217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	44208277	44208100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44208100_44208300
Isoform_194457_4	chr9	+	175	1	Intergenic	novelGene_11218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	618	False	NA	NA	False	NA	NA	NA	44234985	44235160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_44235000_44235200
Isoform_194459_13170	chr9	+	1381	1	FSM	ENSMUSG00000049932.4	ENSMUST00000052686.4	1384	1	-2	5	-2	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	13170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGGTTTAATGTTGA	5251	False	NA	29	True	ATTAAA	-25	NA	44245988	44247369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44246000_44247400
Isoform_19447_25	chr11	+	3942	20	NIC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	17	23	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	82.0795843784869	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGTCTGTGGCCTTTCT	4640	False	NA	43	True	ATTAAA	-43	NA	6339090	6356097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_194476_5	chr4	+	169	1	Intergenic	novelGene_8239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAATAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149273345	149273514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_149273300_149273500
Isoform_194478_11	chr9	+	175	1	Intergenic	novelGene_11219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAAAAGAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	44284500	44284675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_44284500_44284700
Isoform_194479_16	chr9	-	612	1	FSM	ENSMUSG00000060467.5	ENSMUST00000075585.5	438	1	-57	-117	-57	117	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACCAAATAAAATTTGCT	2033	False	NA	NA	False	NA	NA	NA	44286535	44285923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44285900_44286500
Isoform_194482_4	chr9	-	799	1	FSM	ENSMUSG00000111088.2	ENSMUST00000217460.2	818	1	20	-1	20	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGTATTCATGTGA	NA	False	NA	NA	False	NA	NA	NA	44290727	44289928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44289900_44290700
Isoform_194483_6	chr9	-	669	1	FSM	ENSMUSG00000111088.2	ENSMUST00000217460.2	818	1	149	0	149	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGAGTATTCATGTG	NA	False	NA	NA	False	NA	NA	NA	44290598	44289929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44289900_44290600
Isoform_194484_8	chr9	-	178	1	FSM	ENSMUSG00000111088.2	ENSMUST00000217460.2	818	1	637	3	637	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGAGTATTCAT	NA	False	NA	NA	False	NA	NA	NA	44290110	44289932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_44289900_44290100
Isoform_19449_229	chr11	+	4113	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	1	85	1	-1	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGAGTCCTTCCTTT	4914	False	NA	19	True	ATTAAA	-19	NA	6339364	6356073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_194492_4	chr9	-	162	1	Antisense	novelGene_ENSMUSG00000032115.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1982	False	NA	NA	False	NA	NA	NA	44303659	44303497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_44303500_44303700
Isoform_194494_16	chr9	-	172	1	ISM	ENSMUSG00000074397.6	ENSMUST00000098837.3	1968	5	6746	19	6427	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	44345687	44345515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_44345500_44345700
Isoform_194495_4	chr9	-	192	1	Intergenic	novelGene_11221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTAAAAAAAATTGT	1986	False	NA	NA	False	NA	NA	NA	44359661	44359469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44359500_44359700
Isoform_194498_15	chr9	+	491	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	-81	-53	-81	53	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTGTGTGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	44375458	44375949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44375500_44375900
Isoform_19450_56	chr11	+	4197	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	1	1	1	-1	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAAGCTCAGGATATCCC	4914	False	NA	14	True	AATAAA	-17	NA	6339364	6356157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_194500_9	chr9	+	745	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	-81	-307	-81	307	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGGCTTTTGCTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	44375458	44376203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44375500_44376200
Isoform_194501_8	chr9	+	1290	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	-65	-868	-65	868	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGTGTGTACCAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	44375474	44376764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_44375500_44376800
Isoform_194503_32	chr9	-	196	1	Intergenic	novelGene_11222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACAGGGCATGGGGGCA	6793	False	NA	NA	False	NA	NA	NA	44426138	44425942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44425900_44426100
Isoform_194506_3	chr9	+	179	1	Intergenic	novelGene_11224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATGTTTTCAGTACA	1118	False	NA	NA	False	NA	NA	NA	44484321	44484500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_44484300_44484500
Isoform_194507_14	chr9	+	178	1	Intergenic	novelGene_11225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGGACAAACCACAG	2546	False	NA	8	True	NA	NA	NA	44485749	44485927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_44485700_44485900
Isoform_194508_6	chr9	-	178	1	Intergenic	novelGene_11226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATCCCA	NA	False	NA	NA	False	NA	NA	NA	44488830	44488652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44488700_44488800
Isoform_19451_18	chr11	+	5207	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	1	-1009	1	1009	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACAGAATACATGCAACA	4914	False	NA	NA	False	AATAAA	-16	NA	6339364	6357167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_194510_75	chr9	-	181	1	Intergenic	novelGene_11227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9269	False	NA	NA	False	NA	NA	NA	44500916	44500735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44500700_44500900
Isoform_194512_6	chr9	-	180	1	Intergenic	novelGene_11228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGAAAGAGAGAGAGA	2762	False	NA	NA	False	NA	NA	NA	44507423	44507243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44507200_44507400
Isoform_194514_27	chr9	-	177	1	Intergenic	novelGene_11229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTCA	3643	False	NA	NA	False	NA	NA	NA	44522866	44522689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44522700_44522900
Isoform_194515_5	chr9	-	193	1	Intergenic	novelGene_11230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAATAAA	1892	False	NA	NA	False	NA	NA	NA	44524617	44524424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44524400_44524600
Isoform_194517_3	chr9	-	4047	1	Antisense	novelGene_ENSMUSG00000111030.2_AS_novelGene_ENSMUSG00000032097.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTGTTGACAGCT	1369	False	NA	NA	False	NA	NA	NA	44549881	44545834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_44545800_44549900
Isoform_194518_7	chr9	+	1171	1	ISM	ENSMUSG00000032097.11	ENSMUST00000170489.2	6065	14	34669	0	34664	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTGTATGTATGTTC	NA	False	NA	17	True	AATAAA	-18	NA	44550857	44552028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_44550900_44552000
Isoform_194519_14	chr9	+	971	1	ISM	ENSMUSG00000032097.11	ENSMUST00000170489.2	6065	14	34868	1	34863	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTTGTATGTATGTT	NA	False	NA	16	True	AATAAA	-17	NA	44551056	44552027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_44551100_44552000
Isoform_194526_3	chr9	+	252	1	Intergenic	novelGene_11231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGGTCTGTTGTGGGT	8380	False	NA	NA	False	NA	NA	NA	44649733	44649985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_44649700_44650000
Isoform_194531_17	chr9	-	177	1	Intergenic	novelGene_11232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAACAA	NA	False	NA	NA	False	NA	NA	NA	44682631	44682454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44682500_44682600
Isoform_194534_11	chr9	-	175	1	Intergenic	novelGene_11233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGGAAGGAAGGAAGGAA	2081	False	NA	NA	False	NA	NA	NA	44765763	44765588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44765600_44765800
Isoform_194535_6	chr9	+	177	1	Antisense	novelGene_ENSMUSG00000038717.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTATAGATATAT	NA	False	NA	NA	False	NA	NA	NA	44827869	44828046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_44827900_44828000
Isoform_194537_7	chr9	+	171	1	Intergenic	novelGene_11234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAACAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44832943	44833114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_44832900_44833100
Isoform_194538_23	chr9	+	171	1	Intergenic	novelGene_11084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAATACCCTCA	NA	False	NA	NA	False	NA	NA	NA	9128887	9129058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_9128900_9129100
Isoform_194547_3	chr9	+	200	1	ISM	ENSMUSG00000070305.11	ENSMUST00000093856.4	3260	2	8100	1682	4039	-1682	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44974585	44974785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_44974600_44974800
Isoform_194553_12	chr9	+	4636	1	Antisense	novelGene_ENSMUSG00000042790.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	45800329	45804965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_45800300_45805000
Isoform_194554_4	chr9	+	1049	1	FSM	ENSMUSG00000035382.10	ENSMUST00000215535.2	935	1	-111	-3	-68	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	45817726	45818775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45817700_45818800
Isoform_194555_4	chr9	+	520	1	FSM	ENSMUSG00000035382.10	ENSMUST00000215535.2	935	1	418	-3	-27	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	45818255	45818775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_45818300_45818800
Isoform_194556_7	chr9	+	175	1	Intergenic	novelGene_11236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGCACATCC	3733	False	NA	NA	False	NA	NA	NA	45862360	45862535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_45862400_45862500
Isoform_19456_112	chr11	+	4015	20	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_4	67.0811721462118	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4917	False	NA	20	True	ATTAAA	-20	NA	6339367	6356074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_194561_19	chr9	-	175	1	Intergenic	novelGene_11237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATCAGGGATTG	3797	False	NA	-16	True	NA	NA	NA	45903790	45903615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_45903600_45903800
Isoform_194563_19	chr9	-	179	1	Intergenic	novelGene_11238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGTAAATAAATAAG	9592	False	NA	NA	False	NA	NA	NA	45935586	45935407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_45935400_45935600
Isoform_194566_10	chr9	+	188	1	Intergenic	novelGene_11239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTGGTAAGTCATTAA	NA	False	NA	NA	False	NA	NA	NA	46069451	46069639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_46069500_46069600
Isoform_194568_88	chr9	+	176	1	Intergenic	novelGene_11240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGATCTTATACT	NA	False	NA	NA	False	NA	NA	NA	46166963	46167139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_46167000_46167100
Isoform_194571_7	chr9	-	174	1	Intergenic	novelGene_11241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATACAACAAATGT	NA	False	NA	NA	False	NA	NA	NA	46278514	46278340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_46278300_46278500
Isoform_194572_9	chr9	-	180	1	Intergenic	novelGene_11242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATCCCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	47293637	47293457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_47293500_47293600
Isoform_194573_23	chr9	+	172	1	Intergenic	novelGene_11243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	47435939	47436111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_47435900_47436100
Isoform_194575_36	chr9	-	177	1	Intergenic	novelGene_11085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTATTCAGTA	NA	False	NA	NA	False	NA	NA	NA	9513717	9513540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_9513500_9513700
Isoform_194576_3	chr9	-	2691	1	Intergenic	novelGene_11244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCACGACTGTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	47453430	47450739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_47450700_47453400
Isoform_194577_3	chr9	-	4813	2	Antisense	novelGene_ENSMUSG00000032076.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTGGTGCACGCCTT	NA	False	NA	NA	False	NA	NA	NA	47613536	47608689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_47611310_47611343
Isoform_194578_11	chr9	-	2187	1	Intergenic	novelGene_11245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-18	NA	47613536	47611349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_47611300_47613500
Isoform_19458_33	chr11	+	4098	20	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	118	junction_4	67.0811721462118	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAAGCTCAGGATATCCC	4917	False	NA	14	True	AATAAA	-17	NA	6339367	6356157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_194581_7	chr9	+	176	1	Intergenic	novelGene_11246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	48220470	48220646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_48220500_48220600
Isoform_194583_32	chr9	+	201	1	Intergenic	novelGene_11247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTTC	NA	False	NA	NA	False	NA	NA	NA	48373512	48373713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_48373500_48373700
Isoform_194584_4	chr17	-	177	1	ISM	ENSMUSG00000024251.11	ENSMUST00000234313.2	2397	11	22657	0	-7860	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84750976	84750799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_84750800_84751000
Isoform_194589_8	chr9	-	2739	1	FSM	ENSMUSG00000042396.11	ENSMUST00000213525.2	2703	1	-4	-32	-4	32	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAGGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	48406603	48403864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_48403900_48406600
Isoform_194590_51	chr9	+	559	1	FSM	ENSMUSG00000042293.9	ENSMUST00000048824.9	531	1	-40	12	-40	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAAAAATCATGTCTTGG	2743	False	NA	2	True	NA	NA	NA	48406701	48407260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_48406700_48407300
Isoform_194591_68	chr9	+	519	1	FSM	ENSMUSG00000042293.9	ENSMUST00000048824.9	531	1	0	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAAAAATCATGTCTTGG	2783	False	NA	2	True	NA	NA	NA	48406741	48407260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_48406700_48407300
Isoform_194593_5	chr9	+	182	1	Intergenic	novelGene_11248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAACAATAAGTAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	48760240	48760422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_48760200_48760400
Isoform_194594_3	chr9	+	189	1	Intergenic	novelGene_11249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATCTTTACTTGATTT	5483	False	NA	NA	False	AATAAA	-8	NA	48823062	48823251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_48823100_48823300
Isoform_194595_9	chrX	-	177	1	Intergenic	novelGene_12221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACGAAGAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	143063152	143062975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_143063000_143063200
Isoform_194597_14	chr9	-	3788	1	Antisense	novelGene_ENSMUSG00000032267.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48917674	48913886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_48913900_48917700
Isoform_194599_48	chr9	+	178	1	Intergenic	novelGene_11250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAGCCTGTGAG	NA	False	NA	NA	False	NA	NA	NA	48955100	48955278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_48955100_48955300
Isoform_194602_12	chr9	-	180	1	Intergenic	novelGene_11251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAATTAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	49115876	49115696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_49115700_49115900
Isoform_194604_12	chr9	+	3638	2	Antisense	novelGene_ENSMUSG00000039542.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-15	NA	49702101	49705761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_49704530_49704551
Isoform_194605_4	chr9	-	2423	1	Intergenic	novelGene_11252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGCTTTGGACATGAT	9082	False	NA	-5	True	NA	NA	NA	49789870	49787447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_49787400_49789900
Isoform_194607_15	chr9	-	171	1	Intergenic	novelGene_11253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	50078006	50077835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_50077800_50078000
Isoform_194608_3186	chr9	-	754	1	FSM	ENSMUSG00000058443.6	ENSMUST00000076364.6	768	1	-14	28	-14	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	3186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	50256282	50255528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_50255500_50256300
Isoform_194619_42	chr9	+	202	1	Intergenic	novelGene_11254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTAGGAGATGGGAC	NA	False	NA	NA	False	NA	NA	NA	50443581	50443783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_50443600_50443800
Isoform_194628_10	chr9	-	176	1	Intergenic	novelGene_11255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAGGATTTGT	NA	False	NA	NA	False	NA	NA	NA	50839866	50839690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_50839700_50839900
Isoform_194629_3	chr9	-	3399	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	-280	104	-280	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGCATATAAATTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	13246114	13242715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_13242700_13246100
Isoform_194630_3	chr9	-	3295	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	-255	183	-255	-183	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTAATTCTCAGTG	NA	False	NA	NA	False	GATAAA	-14	NA	13246089	13242794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_13242800_13246100
Isoform_194631_20	chr9	-	3167	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	-287	343	-287	-343	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAATGTTTTGATTTT	NA	False	NA	-3	True	ATTAAA	-18	NA	13246121	13242954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_13243000_13246100
Isoform_194634_34	chr9	+	178	1	Intergenic	novelGene_11256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTTTATCGAAA	9969	False	NA	NA	False	NA	NA	NA	51666831	51667009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_51666800_51667000
Isoform_194651_26	chr9	-	178	1	Intergenic	novelGene_11257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	52062841	52062663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_52062700_52062800
Isoform_194652_6	chr9	+	5119	1	Intergenic	novelGene_11258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	3812	False	NA	NA	False	NA	NA	NA	52073562	52078681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_52073600_52078700
Isoform_194653_4	chr9	+	322	1	Intergenic	novelGene_11259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	52714596	52714918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_52714600_52714900
Isoform_194656_4	chr9	+	176	1	Intergenic	novelGene_11260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53067417	53067593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_53067400_53067600
Isoform_194659_6	chr9	-	3878	1	Intergenic	novelGene_11261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	53256961	53253083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_53253100_53257000
Isoform_194660_4	chr9	-	310	1	Intergenic	novelGene_11262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53315835	53315525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_53315500_53315800
Isoform_194663_3	chr9	+	232	1	Intergenic	novelGene_11263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACACTTTAAGA	1732	False	NA	NA	False	NA	NA	NA	53369477	53369709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_53369500_53369700
Isoform_194665_4	chr9	+	6937	1	Antisense	novelGene_ENSMUSG00000034218.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAATTACCTCTGAAGAA	NA	False	NA	NA	False	AAAACA	-26	NA	53419510	53426447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_53419500_53426400
Isoform_194667_44	chr9	-	177	1	Intergenic	novelGene_11264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAACAATATAT	NA	False	NA	NA	False	NA	NA	NA	53512562	53512385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_53512400_53512600
Isoform_194668_30	chr9	-	175	1	Intergenic	novelGene_11265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGCA	NA	False	NA	NA	False	NA	NA	NA	53514224	53514049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_53514000_53514200
Isoform_194677_11	chr9	+	186	1	Intergenic	novelGene_11266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTTTGTTAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	53535197	53535383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_53535200_53535400
Isoform_194678_10	chr9	-	174	1	Intergenic	novelGene_11086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAAACGAA	NA	False	NA	NA	False	NA	NA	NA	13583711	13583537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_13583500_13583700
Isoform_194679_58	chr9	+	157	1	Intergenic	novelGene_11267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	53587664	53587821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_53587700_53587800
Isoform_194680_3	chr9	-	197	1	Intergenic	novelGene_11268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGCAGACAAAACCTGGA	6869	False	NA	NA	False	NA	NA	NA	53603479	53603282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_53603300_53603500
Isoform_194681_5	chr9	+	177	1	Intergenic	novelGene_11269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAGATAGAAAT	NA	False	NA	NA	False	NA	NA	NA	53608243	53608420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_53608200_53608400
Isoform_194682_10	chr9	-	174	1	Intergenic	novelGene_11270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATAAATCTTT	1148	False	NA	NA	False	NA	NA	NA	53616211	53616037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_53616000_53616200
Isoform_194683_7	chr9	-	178	1	Intergenic	novelGene_11271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	53619797	53619619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_53619600_53619800
Isoform_194687_6	chr9	-	3822	1	Intergenic	novelGene_11087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	13669400	13665578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_13665600_13669400
Isoform_194688_13	chr9	+	176	1	Intergenic	novelGene_11274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTGACAG	NA	False	NA	NA	False	NA	NA	NA	54373449	54373625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_54373400_54373600
Isoform_194690_33	chr9	-	176	1	Intergenic	novelGene_11275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGTGA	9977	False	NA	NA	False	NA	NA	NA	54491861	54491685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_54491700_54491900
Isoform_194694_22	chr9	-	207	1	Intergenic	novelGene_11276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTATTTTATATGTT	2322	False	NA	NA	False	AAAAAG	-7	NA	54644902	54644695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_54644700_54644900
Isoform_194696_24	chr9	+	168	1	Intergenic	novelGene_11277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGGTGGA	NA	False	NA	NA	False	NA	NA	NA	54654613	54654781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_54654600_54654800
Isoform_194698_12	chr9	-	178	1	Intergenic	novelGene_11278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCCATTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	54750484	54750306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_54750300_54750500
Isoform_194699_48	chr9	-	176	1	Intergenic	novelGene_11279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATCTTTGTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	54766594	54766418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_54766400_54766600
Isoform_194701_5	chr9	-	169	1	Intergenic	novelGene_11280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAATCTTTTAAAATAT	NA	False	NA	NA	False	NA	NA	NA	54782289	54782120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_54782100_54782300
Isoform_194702_6	chr9	-	1954	1	Antisense	novelGene_ENSMUSG00000032293.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCCCCCCCCAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	54792903	54790949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_54790900_54792900
Isoform_194714_16	chr9	+	173	1	Intergenic	novelGene_11281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACCCAGCAT	NA	False	NA	NA	False	NA	NA	NA	54935041	54935214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_54935000_54935200
Isoform_194716_16	chr9	+	179	1	Intergenic	novelGene_11282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	55024346	55024525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_55024300_55024500
Isoform_194717_48	chr9	+	184	1	Intergenic	novelGene_11283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTGTTTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55049419	55049603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_55049400_55049600
Isoform_194719_6	chr9	-	1514	1	Antisense	novelGene_ENSMUSG00000032307.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCCAGCACTTAACACAA	NA	False	NA	NA	False	AATAAA	-18	NA	55057278	55055764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_55055800_55057300
Isoform_194720_13	chr9	-	171	1	Intergenic	novelGene_11284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTTAAAAAAAAATACTTT	NA	False	NA	NA	False	NA	NA	NA	55109821	55109650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_55109600_55109800
Isoform_194726_3	chr9	-	177	1	Intergenic	novelGene_11089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGACTACAGGAAA	NA	False	NA	NA	False	NA	NA	NA	13741397	13741220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_13741200_13741400
Isoform_194728_35	chr9	-	256	1	Intergenic	novelGene_11285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGGTAAGGGACCGGTT	9969	False	NA	NA	False	NA	NA	NA	55140023	55139767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_55139800_55140000
Isoform_194730_26	chr9	+	200	1	Intergenic	novelGene_11286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACTTAATAAAAACAGATG	9560	False	NA	NA	False	NA	NA	NA	55159626	55159826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_55159600_55159800
Isoform_194736_10	chr9	-	183	1	Intergenic	novelGene_11090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	13866725	13866542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_13866500_13866700
Isoform_194738_9	chr9	+	176	1	Intergenic	novelGene_11287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAGATGAC	3049	False	NA	NA	False	NA	NA	NA	55941329	55941505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_55941300_55941500
Isoform_194739_4	chr9	+	245	1	Intergenic	novelGene_11288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTACATAGTGAGTGTAAG	6719	False	NA	NA	False	NA	NA	NA	56152838	56153083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_56152800_56153100
Isoform_194740_4	chr9	-	1421	1	FSM	ENSMUSG00000074305.10	ENSMUST00000185775.2	1352	1	-54	-15	-37	15	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGAAAGCCCAAACTTGA	NA	False	NA	NA	False	NA	NA	NA	56325388	56323967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_56324000_56325400
Isoform_194749_9	chr9	+	267	1	FSM	ENSMUSG00000118653.2	ENSMUST00000239472.2	988	1	728	-7	728	7	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACATATGGTAAACAAG	NA	False	NA	NA	False	AATAAA	-40	NA	56345468	56345735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56345500_56345700
Isoform_194751_7	chr9	-	173	1	Intergenic	novelGene_11289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTGGTAGTAGGGT	NA	False	NA	NA	False	NA	NA	NA	56347993	56347820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_56347800_56348000
Isoform_194757_3	chr9	-	156	1	Intergenic	novelGene_11291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	56422247	56422091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_56422100_56422200
Isoform_194759_165	chr19	+	177	1	Intergenic	novelGene_5911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53712359	53712536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53712400_53712500
Isoform_194762_4	chr9	+	178	1	Intergenic	novelGene_11293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	56828227	56828405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_56828200_56828400
Isoform_194763_5	chr9	+	158	1	Intergenic	novelGene_11294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACAAAACACAACACT	NA	False	NA	NA	False	NA	NA	NA	56844358	56844516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_56844400_56844500
Isoform_194764_293	chr9	+	915	1	FSM	ENSMUSG00000032288.10	ENSMUST00000034827.10	924	1	9	0	9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTGTCTGGTCGTTCT	NA	False	NA	18	True	AATAAA	-27	NA	56844767	56845682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_56844800_56845700
Isoform_19477_18059	chr11	+	745	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	425	0	0	0	multi-exon	FALSE	canonical	3	36680	junction_4	732.852474922477	18059	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
Isoform_194770_3	chr9	+	714	1	NIC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	37	-31578	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAGAAAA	NA	False	NA	NA	False	NA	NA	NA	56858198	56858912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_56858200_56858900
Isoform_194771_5	chr9	-	200	1	Intergenic	novelGene_11295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1006	False	NA	NA	False	NA	NA	NA	56859485	56859285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_56859300_56859500
Isoform_194772_57	chr9	-	160	1	Intergenic	novelGene_11296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	56863831	56863671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_56863700_56863800
Isoform_194775_7	chr9	-	175	1	Intergenic	novelGene_11297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAAACGTCCTTC	9946	False	NA	NA	False	NA	NA	NA	56918037	56917862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_56917900_56918000
Isoform_194779_43	chr9	-	207	1	Intergenic	novelGene_11298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTCACTAGTAAGGC	NA	False	NA	NA	False	NA	NA	NA	56982235	56982028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_56982000_56982200
Isoform_194780_33	chr9	-	179	1	Intergenic	novelGene_11299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATCTTCCTGTAATC	NA	False	NA	NA	False	NA	NA	NA	57006016	57005837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_57005800_57006000
Isoform_194782_3	chr9	+	462	1	Antisense	novelGene_ENSMUSG00000032298.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	57055496	57055958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_57055500_57056000
Isoform_194784_4	chr9	+	173	1	Intergenic	novelGene_11300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGTAACA	4865	False	NA	NA	False	NA	NA	NA	57085945	57086118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57085900_57086100
Isoform_194785_27	chr9	+	174	1	Intergenic	novelGene_11091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	14310864	14311038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_14310900_14311000
Isoform_194786_5	chr9	-	2357	1	NIC	ENSMUSG00000032300.8	novel	4152	3	NA	NA	3	-1464	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGGAAGGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	57169877	57167520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_57167500_57169900
Isoform_194787_14	chr9	+	167	1	Intergenic	novelGene_11301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATTTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	57191656	57191823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57191700_57191800
Isoform_194789_4	chr9	-	194	1	Intergenic	novelGene_11302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGGCTTGTCATAAT	NA	False	NA	NA	False	NA	NA	NA	57240282	57240088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_57240100_57240300
Isoform_194791_21	chr9	+	1443	1	Antisense	novelGene_ENSMUSG00000063849.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57331944	57333387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_57331900_57333400
Isoform_194797_8	chr9	-	3875	1	Intergenic	novelGene_11303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCGTCTGTTCGTGA	NA	False	NA	NA	False	NA	NA	NA	57388336	57384461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_57384500_57388300
Isoform_194799_36	chr9	+	704	1	FSM	ENSMUSG00000074280.7	ENSMUST00000098689.7	409	1	-47	-248	-47	248	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTCCAGCAATGTTCA	NA	False	NA	NA	False	NA	NA	NA	57391198	57391902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57391200_57391900
Isoform_194801_19	chr9	+	171	1	Intergenic	novelGene_11304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCCACACCCACAGTGA	NA	False	NA	NA	False	NA	NA	NA	57402239	57402410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57402200_57402400
Isoform_194805_664	chr9	+	1419	1	FSM	ENSMUSG00000062309.9	ENSMUST00000080514.9	1423	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	664	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCAGTTTTGTTC	NA	False	NA	12	True	AATAAA	-17	NA	57411312	57412731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_57411300_57412700
Isoform_194810_3	chr9	+	1973	1	Intergenic	novelGene_11306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	57415161	57417134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57415200_57417100
Isoform_194811_3	chr9	+	1673	1	Intergenic	novelGene_11307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	57415463	57417136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57415500_57417100
Isoform_194812_4	chr9	+	180	1	Intergenic	novelGene_11308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATGAAACATGT	NA	False	NA	NA	False	NA	NA	NA	57422144	57422324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57422100_57422300
Isoform_194817_3	chr19	+	176	2	Intergenic	novelGene_5847	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	8265	False	NA	NA	False	NA	NA	NA	45243872	45276845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45243898_45276694
Isoform_194818_25	chr9	-	195	1	Intergenic	novelGene_11309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTCAGTTTGTGTG	614	False	NA	NA	False	NA	NA	NA	57480436	57480241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_57480200_57480400
Isoform_194820_16	chr9	+	3740	1	Intergenic	novelGene_11310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAAC	6304	False	NA	NA	False	NA	NA	NA	57547781	57551521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57547800_57551500
Isoform_194823_3	chr9	-	1482	1	ISM	ENSMUSG00000013076.18	ENSMUST00000013220.8	8957	13	71556	3	15601	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGCTCCTCTTTTACC	NA	False	NA	-2	True	AATAAA	-14	NA	14454746	14453264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_14453300_14454700
Isoform_194825_10	chr11	+	189	1	Intergenic	novelGene_2305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGATTGA	NA	False	NA	NA	False	NA	NA	NA	116265562	116265751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_116265600_116265800
Isoform_194832_4	chr9	-	161	1	Intergenic	novelGene_11313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	57768760	57768599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_57768600_57768800
Isoform_194833_3	chr9	+	314	1	Intergenic	novelGene_11314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	57809556	57809870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57809600_57809900
Isoform_194836_10	chr9	+	176	1	Intergenic	novelGene_11315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTTACCTCTC	NA	False	NA	NA	False	NA	NA	NA	58077170	58077346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_58077200_58077300
Isoform_194837_48	chr9	-	177	1	Intergenic	novelGene_11316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	2224	False	NA	NA	False	NA	NA	NA	58100090	58099913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58099900_58100100
Isoform_194844_8	chr9	+	175	1	Intergenic	novelGene_11092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACTGTCTAGAAAT	NA	False	NA	NA	False	NA	NA	NA	14583866	14584041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_14583900_14584000
Isoform_194846_3	chr9	+	823	1	Intergenic	novelGene_11317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATTTATTGAGCAGTCA	1770	False	NA	NA	False	NA	NA	NA	58133665	58134488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_58133700_58134500
Isoform_194849_20	chr9	-	184	1	Intergenic	novelGene_11318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACAATTTGCTTTTGGC	7122	False	NA	NA	False	NA	NA	NA	58152098	58151914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58151900_58152100
Isoform_194850_3	chr9	-	1104	1	Antisense	novelGene_ENSMUSG00000032333.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58162386	58161282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_58161300_58162400
Isoform_194852_14	chr9	-	177	1	Intergenic	novelGene_11319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTCACGGG	NA	False	NA	NA	False	NA	NA	NA	58166914	58166737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58166700_58166900
Isoform_194855_3	chr9	+	859	1	Intergenic	novelGene_11321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	58182720	58183579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_58182700_58183600
Isoform_194856_4	chr9	+	746	1	Intergenic	novelGene_11322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	58182833	58183579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_58182800_58183600
Isoform_194857_17	chr9	-	175	1	Intergenic	novelGene_11323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	9799	False	NA	NA	False	NA	NA	NA	58188652	58188477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58188500_58188700
Isoform_194858_18	chr9	-	178	1	Intergenic	novelGene_11324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGATGGGC	2920	False	NA	NA	False	NA	NA	NA	58201458	58201280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58201300_58201500
Isoform_194859_41	chr9	-	230	1	Intergenic	novelGene_11325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTTATTTTTATAAAA	NA	False	NA	NA	False	NA	NA	NA	58208017	58207787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58207800_58208000
Isoform_194864_4	chr9	-	171	1	Intergenic	novelGene_11326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAATAATGCACTT	NA	False	NA	NA	False	NA	NA	NA	58424824	58424653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58424700_58424800
Isoform_194868_14	chr9	-	179	1	Intergenic	novelGene_11327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAATACAAGAA	NA	False	NA	NA	False	NA	NA	NA	58497773	58497594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58497600_58497800
Isoform_194869_4	chr9	-	2559	1	Intergenic	novelGene_11328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58509228	58506669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58506700_58509200
Isoform_194871_20	chr9	-	189	1	Intergenic	novelGene_11329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATATACCATCACACCCA	NA	False	NA	NA	False	NA	NA	NA	58531615	58531426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58531400_58531600
Isoform_194872_486	chr9	-	193	1	Intergenic	novelGene_11330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTATACAATGTTGGAT	NA	False	NA	NA	False	NA	NA	NA	58535755	58535562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58535600_58535800
Isoform_194874_17	chr9	-	173	1	Intergenic	novelGene_11331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	7936	False	NA	NA	False	NA	NA	NA	58574145	58573972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58574000_58574100
Isoform_194878_7	chr9	-	183	1	Intergenic	novelGene_11332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAAATGTCAACTTTTG	NA	False	NA	NA	False	NA	NA	NA	58809862	58809679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_58809700_58809900
Isoform_194879_40	chr19	+	178	1	Intergenic	novelGene_5627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGAAATGGGCA	NA	False	NA	NA	False	NA	NA	NA	6707897	6708075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6707900_6708100
Isoform_194880_164	chr7	-	175	1	Intergenic	novelGene_9902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27379836	27379661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_27379700_27379800
Isoform_194886_4	chr9	-	163	1	ISM	ENSMUSG00000025235.9	ENSMUST00000214225.2	3757	2	11119	33	11109	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATACAGTGTATAATAAT	NA	False	NA	NA	False	NA	NA	NA	59249613	59249450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_59249400_59249600
Isoform_194897_46	chr9	-	181	1	Intergenic	novelGene_11093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAAAGAGCT	2434	False	NA	NA	False	NA	NA	NA	14749567	14749386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_14749400_14749600
Isoform_194898_6	chr9	+	202	1	Intergenic	novelGene_11334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAATACCGTCTCTCT	8099	False	NA	NA	False	AATAAA	-17	NA	59323265	59323467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_59323300_59323500
Isoform_194901_7	chr9	+	3995	1	Intergenic	novelGene_11335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59384781	59388776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_59384800_59388800
Isoform_194902_8	chr9	-	2412	1	Genic_Genomic	ENSMUSG00000025234.12	novel	NA	NA	NA	NA	-52	-47635	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAACTTTTTGACTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	59393953	59391541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_59391500_59394000
Isoform_194903_31	chr9	-	179	1	Intergenic	novelGene_11336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATACTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59415094	59414915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_59414900_59415100
Isoform_194905_5	chr9	-	179	1	Intergenic	novelGene_11337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATTTTCTTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	59429802	59429623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_59429600_59429800
Isoform_194906_19	chr9	+	181	1	Intergenic	novelGene_11338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAGCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	59429832	59430013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_59429800_59430000
Isoform_194907_76	chr9	-	173	1	Intergenic	novelGene_11339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGTACC	6549	False	NA	NA	False	NA	NA	NA	59480114	59479941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_59479900_59480100
Isoform_194908_171	chr9	+	181	1	Intergenic	novelGene_11340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATTCAGAGCTGGA	4478	False	NA	NA	False	NA	NA	NA	59491234	59491415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_59491200_59491400
Isoform_194909_14	chr9	-	177	1	Intergenic	novelGene_11341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTGAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	59500863	59500686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_59500700_59500900
Isoform_194910_67	chr9	-	228	1	Intergenic	novelGene_11342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTCCTGGATTTCTC	NA	False	NA	NA	False	NA	NA	NA	59512725	59512497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_59512500_59512700
Isoform_194911_21	chr9	+	174	1	Genic_Genomic	ENSMUSG00000025237.17	novel	NA	NA	NA	NA	-129	-3262	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	59528709	59528883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_59528700_59528900
Isoform_194918_9	chr9	-	174	1	Intergenic	novelGene_11343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	59591072	59590898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_59590900_59591100
Isoform_19492_695	chr11	+	1833	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	24	1	1	1	multi-exon	FALSE	canonical	3	315	junction_9	41.5204843093617	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCAGTTGTCAAGCATT	NA	False	NA	14	True	AAAACA	-26	NA	6496910	6546743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
Isoform_194920_5	chr9	-	181	1	Intergenic	novelGene_11094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATACTTAAGGGT	NA	False	NA	NA	False	NA	NA	NA	14790762	14790581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_14790600_14790800
Isoform_194921_3	chr9	-	840	1	NIC	ENSMUSG00000051705.14	novel	3682	2	NA	NA	1	-11955	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	6441	False	NA	NA	False	NA	NA	NA	59657909	59657069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_59657100_59657900
Isoform_194922_62	chr9	-	176	1	Intergenic	novelGene_11344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59664449	59664273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_59664300_59664400
Isoform_194925_3	chr9	+	161	1	Intergenic	novelGene_11345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	59693688	59693849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_59693700_59693800
Isoform_194926_10	chr9	+	170	1	Intergenic	novelGene_11346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTCTTTAAAAAAAA	743	False	NA	NA	False	NA	NA	NA	59710206	59710376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_59710200_59710400
Isoform_194927_16	chr9	+	183	1	Intergenic	novelGene_11347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATGCAAATA	NA	False	NA	NA	False	NA	NA	NA	59746062	59746245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_59746100_59746200
Isoform_194928_12	chr9	+	1655	1	Intergenic	novelGene_11348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGGCGCTG	NA	False	NA	NA	False	NA	NA	NA	59844011	59845666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_59844000_59845700
Isoform_194930_5	chr9	+	289	1	Intergenic	novelGene_11349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATTTACCATCATT	NA	False	NA	NA	False	ATTAAA	-11	NA	59885789	59886078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_59885800_59886100
Isoform_194932_14	chr9	+	177	1	Intergenic	novelGene_11351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	60588686	60588863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_60588700_60588900
Isoform_194933_81	chr9	+	179	1	Intergenic	novelGene_11352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGGCACAGAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	60684796	60684975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_60684800_60685000
Isoform_194936_12	chr9	-	176	1	Intergenic	novelGene_11095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCCCACAGA	NA	False	NA	NA	False	NA	NA	NA	15122763	15122587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_15122600_15122800
Isoform_19494_8	chr11	+	1720	9	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	-5	4	combination_of_known_junctions	TRUE	canonical	2	2	junction_4	144.667506717991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATCTCCAGTTGTCAA	NA	False	NA	9	True	AAAACA	-21	NA	6496881	6546738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
Isoform_194946_4	chr9	+	1984	1	NIC	ENSMUSG00000031937.8	novel	1991	4	NA	NA	20	-18368	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-36	NA	15150360	15152344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_15150400_15152300
Isoform_194947_259	chr9	+	204	1	Intergenic	novelGene_11353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAGAAAAATAGG	NA	False	NA	NA	False	NA	NA	NA	61781193	61781397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_61781200_61781400
Isoform_194948_11	chr9	+	157	1	Intergenic	novelGene_11354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	61786716	61786873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_61786700_61786900
Isoform_19495_31	chr11	+	1670	9	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	133.856266196245	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCAGTTGTCAAGCAT	NA	False	NA	13	True	AAAACA	-25	NA	6496898	6546742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_6497030_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
Isoform_194950_3	chr9	+	183	1	Intergenic	novelGene_11355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGAAGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61850430	61850613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_61850400_61850600
Isoform_194952_5	chr9	-	178	1	Intergenic	novelGene_11356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAAAGAAAACGCTT	7088	False	NA	NA	False	NA	NA	NA	61913335	61913157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_61913200_61913300
Isoform_194953_87	chrX	-	177	1	Intergenic	novelGene_11878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	13118479	13118302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_13118300_13118500
Isoform_194963_1045	chr9	+	167	1	Intergenic	novelGene_11357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1045	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	62233713	62233880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_62233700_62233900
Isoform_194965_8	chr9	-	176	1	Intergenic	novelGene_11358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	62306218	62306042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_62306000_62306200
Isoform_194969_8	chr9	+	189	1	Intergenic	novelGene_11359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGATTGCAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	62525727	62525916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_62525700_62525900
Isoform_194970_180	chr9	+	178	1	Intergenic	novelGene_11360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	62620932	62621110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_62620900_62621100
Isoform_19498_6	chr11	+	1229	3	FSM	ENSMUSG00000041046.8	ENSMUST00000045374.8	1233	3	4	0	4	0	multi-exon	FALSE	canonical	2	5	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTATTTCTCATTTTAT	NA	False	NA	14	True	ATTAAA	-14	NA	6608524	6627475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_6608628_6624762_6624896_6626482
Isoform_19499_17	chr11	+	6710	20	FSM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	-82	5631	-82	-4	multi-exon	FALSE	canonical	3	12	junction_6	3.58667895524228	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTATTATATTGCCTT	NA	False	NA	5	True	GATAAA	-24	NA	7013406	7122875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
Isoform_19500_4	chr11	+	8123	20	FSM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	-69	4205	-69	1422	multi-exon	FALSE	canonical	3	12	junction_6	3.58667895524228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTATGTGGGTCTTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	7013419	7124301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
Isoform_19501_4	chr11	+	2378	7	FSM	ENSMUSG00000040978.5	ENSMUST00000043285.5	2400	7	20	2	20	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.25830573921179	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCAGCTGCCTCTCTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	8998613	9019354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_8999201_9002693_9002880_9004209_9004319_9006421_9006579_9009910_9010009_9011165_9011387_9018334
Isoform_19502_98	chr11	+	1256	9	FSM	ENSMUSG00000020407.14	ENSMUST00000101525.9	1157	9	-101	2	-97	1	multi-exon	FALSE	canonical	3	102	junction_1	904.856126339983	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTCTGCGGTA	NA	False	NA	24	True	AATAAA	-18	NA	9068005	9086168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_9068163_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
Isoform_195024_14	chr9	+	3223	1	Antisense	novelGene_ENSMUSG00000032244.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAACCAGATATAGG	NA	False	NA	NA	False	NA	NA	NA	62703410	62706633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_62703400_62706600
Isoform_195025_16	chr9	-	176	1	Intergenic	novelGene_11361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATTAAGGTAA	NA	False	NA	NA	False	NA	NA	NA	62709619	62709443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_62709400_62709600
Isoform_195026_12	chr9	+	181	1	Intergenic	novelGene_11362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACTGATCTTTCTAGC	NA	False	NA	NA	False	NA	NA	NA	62714813	62714994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_62714800_62715000
Isoform_195027_12	chr16	+	179	1	Intergenic	novelGene_4640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAACA	3214	False	NA	NA	False	NA	NA	NA	95828101	95828280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_95828100_95828300
Isoform_195030_13	chr9	+	170	1	Intergenic	novelGene_11363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAATTAATA	8778	False	NA	NA	False	NA	NA	NA	62792307	62792477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_62792300_62792500
Isoform_195031_98	chr9	-	175	1	Intergenic	novelGene_11364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAGAAGAAGTT	3899	False	NA	NA	False	NA	NA	NA	62793021	62792846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_62792800_62793000
Isoform_195032_108	chr2	+	177	1	Intergenic	novelGene_6633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACAAATAATTCTCTA	NA	False	NA	NA	False	NA	NA	NA	152719312	152719489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_152719300_152719500
Isoform_195034_74	chr9	-	180	1	Intergenic	novelGene_11365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	62836060	62835880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_62835900_62836100
Isoform_195037_4	chr9	+	179	1	Intergenic	novelGene_11366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATATAGG	NA	False	NA	NA	False	NA	NA	NA	62962525	62962704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_62962500_62962700
Isoform_195038_36	chr9	-	222	1	Intergenic	novelGene_11367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTATTTTATATATATA	NA	False	NA	NA	False	AAGAAA	-28	NA	62990801	62990579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_62990600_62990800
Isoform_195039_5	chr9	+	180	1	Intergenic	novelGene_11368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATATATTTGTTAAT	6140	False	NA	NA	False	NA	NA	NA	63099576	63099756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_63099600_63099800
Isoform_195040_44	chr9	-	177	1	Intergenic	novelGene_11096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGTGGAATA	NA	False	NA	NA	False	NA	NA	NA	15213608	15213431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_15213400_15213600
Isoform_195041_9	chr9	-	4799	1	FSM	ENSMUSG00000032403.9	ENSMUST00000185528.2	1771	1	1	-3029	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTAGAGTGTGT	NA	False	NA	-11	True	AATAAA	-15	NA	63306527	63301728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_63301700_63306500
Isoform_195043_124	chr9	-	210	1	Intergenic	novelGene_11369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTGACCAGGACAATT	NA	False	NA	NA	False	NA	NA	NA	63325364	63325154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_63325200_63325400
Isoform_195045_3	chr9	+	2888	1	Antisense	novelGene_ENSMUSG00000032402.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATACAAAAACAAACAGGTG	NA	False	NA	NA	False	NA	NA	NA	63664696	63667584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_63664700_63667600
Isoform_195046_4	chr9	+	2825	1	Antisense	novelGene_ENSMUSG00000032402.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACAGGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	63664764	63667589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_63664800_63667600
Isoform_195047_32	chr9	-	158	1	Intergenic	novelGene_11370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	63720374	63720216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_63720200_63720400
Isoform_195049_3	chr9	+	174	1	Intergenic	novelGene_11371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	63839095	63839269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_63839100_63839300
Isoform_195051_5	chr9	-	197	1	Intergenic	novelGene_11372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAGAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	63987297	63987100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_63987100_63987300
Isoform_195053_6	chr9	+	176	1	Intergenic	novelGene_11373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	64034774	64034950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64034800_64035000
Isoform_195054_3	chr9	-	165	1	Intergenic	novelGene_11374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTTATAAGCCCTAC	NA	False	NA	NA	False	NA	NA	NA	64042574	64042409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_64042400_64042600
Isoform_195057_80	chr9	+	175	1	Intergenic	novelGene_11375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	64047874	64048049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64047900_64048000
Isoform_195058_24	chr9	+	1201	1	Intergenic	novelGene_11376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGTACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64064122	64065323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64064100_64065300
Isoform_195060_10	chr9	+	172	1	Intergenic	novelGene_11377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	64077224	64077396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64077200_64077400
Isoform_195066_62	chr9	+	200	1	Intergenic	novelGene_11378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTTAATTCTAATGCTG	4238	False	NA	NA	False	NA	NA	NA	64089165	64089365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64089200_64089400
Isoform_195068_3	chr9	+	1288	1	FSM	ENSMUSG00000065663.3	ENSMUST00000083729.3	133	1	-1152	-3	-1152	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCACTTAACATACACT	NA	False	NA	NA	False	NA	NA	NA	15226819	15228107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_15226800_15228100
Isoform_195070_25	chr9	-	175	1	Intergenic	novelGene_11379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATTTAAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	64098337	64098162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_64098200_64098300
Isoform_195072_104	chr9	+	178	1	Intergenic	novelGene_11380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64151852	64152030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64151900_64152000
Isoform_195074_7	chr9	+	175	1	Intergenic	novelGene_11381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAATTTTAGA	NA	False	NA	NA	False	NA	NA	NA	64168558	64168733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64168600_64168700
Isoform_195075_5	chr9	-	176	1	Intergenic	novelGene_11382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAATAAGAATAAAAA	9805	False	NA	NA	False	NA	NA	NA	64174486	64174310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_64174300_64174500
Isoform_195076_28	chr9	+	178	1	Intergenic	novelGene_11383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATTAAACAA	3555	False	NA	NA	False	NA	NA	NA	64182874	64183052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64182900_64183100
Isoform_195077_7	chr9	+	152	1	Intergenic	novelGene_11384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAATTATTTGTAA	4396	False	NA	NA	False	NA	NA	NA	64183715	64183867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64183700_64183900
Isoform_195078_63	chr1	+	177	1	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	21405208	21405385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_21405200_21405400
Isoform_195080_16	chr9	+	190	1	Intergenic	novelGene_11386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAAGTCAACCTTGTATG	7158	False	NA	NA	False	NA	NA	NA	64186477	64186667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64186500_64186700
Isoform_195081_2370	chr9	+	177	1	Intergenic	novelGene_11387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2370	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACTTTTATATGTA	7800	False	NA	0	True	NA	NA	NA	64187119	64187296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64187100_64187300
Isoform_195086_4	chr9	-	336	1	Intergenic	novelGene_11388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAATAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	64194052	64193716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_64193700_64194100
Isoform_195087_30	chr9	-	180	1	Intergenic	novelGene_11389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	64202320	64202140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_64202100_64202300
Isoform_195090_631	chr11	+	177	1	ISM	ENSMUSG00000040483.16	ENSMUST00000146233.8	2597	6	10368	1559	10333	93	mono-exon	FALSE	NA	NA	NA	NA	NA	631	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAGCAT	NA	False	NA	NA	False	NA	NA	NA	72202823	72203000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_72202800_72203000
Isoform_195091_4	chr9	+	170	1	Intergenic	novelGene_11390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTTAAGAA	5252	False	NA	NA	False	NA	NA	NA	64286854	64287024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64286900_64287000
Isoform_195092_15	chr9	+	174	1	Intergenic	novelGene_11391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAAAAAGACCCAGGT	4968	False	NA	NA	False	NA	NA	NA	64298980	64299154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64299000_64299200
Isoform_195093_4	chr9	+	617	1	Antisense	novelGene_ENSMUSG00000046111.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAACCAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15251747	15252364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_15251700_15252400
Isoform_195094_70	chr9	+	195	1	Intergenic	novelGene_11392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTGTGAGA	NA	False	NA	NA	False	NA	NA	NA	64617796	64617991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64617800_64618000
Isoform_195095_12	chr9	+	177	1	Intergenic	novelGene_11393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTTGCAACTTAT	NA	False	NA	NA	False	NA	NA	NA	64620272	64620449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64620300_64620400
Isoform_195097_17	chr9	-	182	1	Intergenic	novelGene_11394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAACAATAAAGCCCCA	NA	False	NA	NA	False	NA	NA	NA	64649070	64648888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_64648900_64649100
Isoform_195099_38	chr9	+	178	1	Intergenic	novelGene_11395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCTGTGATGATCTC	NA	False	NA	NA	False	NA	NA	NA	64672703	64672881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64672700_64672900
Isoform_195101_7	chr9	-	1897	1	Intergenic	novelGene_11396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6478	False	NA	NA	False	AAGAAA	-45	NA	64731245	64729348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_64729300_64731200
Isoform_195103_5	chr9	-	4281	1	Antisense	novelGene_ENSMUSG00000053641.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4161	False	NA	NA	False	NA	NA	NA	64825964	64821683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_64821700_64826000
Isoform_195104_75	chr9	-	180	1	Intergenic	novelGene_11397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAAAGCTGG	884	False	NA	NA	False	NA	NA	NA	64829241	64829061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_64829100_64829200
Isoform_195105_6	chr9	+	199	1	Intergenic	novelGene_11398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	64865733	64865932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64865700_64865900
Isoform_195106_64	chr9	+	195	1	Intergenic	novelGene_11399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTGTAAAACTCAATGT	NA	False	NA	NA	False	NA	NA	NA	64902058	64902253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64902100_64902300
Isoform_195108_19	chr9	-	174	1	Intergenic	novelGene_11097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAATTAAGCAG	3834	False	NA	NA	False	NA	NA	NA	15302623	15302449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_15302400_15302600
Isoform_195109_8	chr9	+	177	1	Intergenic	novelGene_11400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATGAAATTGAGAG	NA	False	NA	NA	False	NA	NA	NA	64999679	64999856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_64999700_64999900
Isoform_195110_7	chr9	+	177	1	Intergenic	novelGene_11401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTAGGCT	4958	False	NA	NA	False	NA	NA	NA	65026757	65026934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65026800_65026900
Isoform_195111_3	chr9	-	181	1	Intergenic	novelGene_11402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAAACACAAA	3552	False	NA	NA	False	NA	NA	NA	65033507	65033326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65033300_65033500
Isoform_195114_4	chr9	-	908	1	FSM	ENSMUSG00000119286.1	ENSMUST00000101817.3	116	1	0	-792	0	792	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAAAGTAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	65109123	65108215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65108200_65109100
Isoform_195115_33	chr9	-	181	1	Intergenic	novelGene_11640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	5682	False	NA	NA	False	NA	NA	NA	106121409	106121228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106121200_106121400
Isoform_195118_17	chr9	+	158	1	Intergenic	novelGene_11403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	65227520	65227678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65227500_65227700
Isoform_195119_6	chr9	-	179	1	Intergenic	novelGene_11404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	65238473	65238294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65238300_65238500
Isoform_195121_8	chr9	-	178	1	Intergenic	novelGene_11405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATCCTTAATGAAA	NA	False	NA	NA	False	NA	NA	NA	65275424	65275246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65275200_65275400
Isoform_195122_438	chr9	-	176	1	Intergenic	novelGene_11406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65283370	65283194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65283200_65283400
Isoform_195123_3	chr9	-	2818	1	FSM	ENSMUSG00000054978.4	ENSMUST00000068307.4	2969	1	143	8	143	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCCTATGGACTCTAGG	NA	False	NA	NA	False	AATAAA	-11	NA	65298791	65295973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_65296000_65298800
Isoform_195124_17	chr9	+	219	1	Intergenic	novelGene_11407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTTTCAACTAAACG	NA	False	NA	NA	False	NA	NA	NA	65478745	65478964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65478700_65479000
Isoform_195125_118	chr9	+	177	1	Intergenic	novelGene_11408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAACGAGTT	NA	False	NA	NA	False	NA	NA	NA	65481464	65481641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65481500_65481600
Isoform_195126_30	chr9	-	178	1	Intergenic	novelGene_11409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATACTCACTTC	NA	False	NA	NA	False	NA	NA	NA	65489563	65489385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65489400_65489600
Isoform_195128_3	chr9	+	377	1	Intergenic	novelGene_11410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACAACTAGAGAG	NA	False	NA	NA	False	NA	NA	NA	65490976	65491353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65491000_65491400
Isoform_195130_4	chr9	-	1802	1	Antisense	novelGene_ENSMUSG00000041064.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTACGCTGTCTGCTTTTC	3938	False	NA	NA	False	NA	NA	NA	65495975	65494173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_65494200_65496000
Isoform_195134_5	chr9	-	3570	1	Antisense	novelGene_ENSMUSG00000041064.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAACAAAAAATTGGG	9584	False	NA	NA	False	NA	NA	NA	65503128	65499558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_65499600_65503100
Isoform_195135_18	chr9	+	188	1	Intergenic	novelGene_11411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATACTCT	NA	False	NA	NA	False	NA	NA	NA	65501358	65501546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65501400_65501500
Isoform_195137_47	chr9	-	180	1	Intergenic	novelGene_11413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTTTAAGTTTTCT	7078	False	NA	NA	False	NA	NA	NA	65505634	65505454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65505500_65505600
Isoform_195138_18	chr9	-	166	1	Intergenic	novelGene_11414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTTTAAAAAATGATTT	1233	False	NA	NA	False	NA	NA	NA	65511479	65511313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65511300_65511500
Isoform_19514_4703	chr11	+	1133	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	120	-1	0	1	multi-exon	FALSE	canonical	3	2502	junction_1	159.654656602932	4703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTCTGCGGTA	NA	False	NA	24	True	AATAAA	-18	NA	9068626	9086168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
Isoform_195140_64	chr9	-	203	1	Intergenic	novelGene_11415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACACCTTCTCCAGAAC	6685	False	NA	NA	False	NA	NA	NA	65523119	65522916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65522900_65523100
Isoform_195141_75	chr9	+	179	1	Intergenic	novelGene_11416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	65527867	65528046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65527900_65528000
Isoform_195143_15	chr9	-	3597	1	Intergenic	novelGene_11417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGATGCCCACAT	9636	False	NA	NA	False	NA	NA	NA	65545901	65542304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65542300_65545900
Isoform_195149_23	chr9	-	173	1	Intergenic	novelGene_11418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAATAATAA	6009	False	NA	NA	False	NA	NA	NA	65574074	65573901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65573900_65574100
Isoform_195151_11	chr9	+	175	1	Intergenic	novelGene_11098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGACAGGAAACC	NA	False	NA	NA	False	NA	NA	NA	15852795	15852970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_15852800_15853000
Isoform_195153_8	chr9	+	204	1	Intergenic	novelGene_11419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAAGACAGAATCA	NA	False	NA	NA	False	NA	NA	NA	65713654	65713858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65713700_65713900
Isoform_195154_3	chr9	+	192	1	Intergenic	novelGene_11420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTGTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65716100	65716292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65716100_65716300
Isoform_195159_22	chr9	+	181	1	Antisense	novelGene_ENSMUSG00000032386.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGAGTGGGGCTGGGG	NA	False	NA	NA	False	NA	NA	NA	65802497	65802678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_65802500_65802700
Isoform_195160_96	chr9	-	173	1	Intergenic	novelGene_11422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	65803388	65803215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65803200_65803400
Isoform_195161_13	chr9	-	217	1	Intergenic	novelGene_11423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGGATTAAAGATT	NA	False	NA	NA	False	NA	NA	NA	65896989	65896772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65896800_65897000
Isoform_195162_7	chr9	+	159	1	Intergenic	novelGene_11424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATTTTTAAAAAAG	7403	False	NA	NA	False	NA	NA	NA	65921733	65921892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65921700_65921900
Isoform_195166_5	chr9	-	180	1	Intergenic	novelGene_11425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	65961211	65961031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_65961000_65961200
Isoform_195178_121	chr9	-	173	1	Intergenic	novelGene_11426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66395718	66395545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_66395500_66395700
Isoform_195180_27	chr9	-	162	1	Intergenic	novelGene_11427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	66439944	66439782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_66439800_66439900
Isoform_195181_5	chr9	+	173	1	Intergenic	novelGene_11428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATC	4766	False	NA	NA	False	NA	NA	NA	66517384	66517557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_66517400_66517600
Isoform_195182_10	chr9	-	186	1	Intergenic	novelGene_11429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	66562060	66561874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_66561900_66562100
Isoform_195183_39	chr9	+	180	1	Intergenic	novelGene_11430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	66637245	66637425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_66637200_66637400
Isoform_195185_67	chr9	+	178	1	Intergenic	novelGene_11431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTATTAAATAAATAATA	NA	False	NA	NA	False	NA	NA	NA	66744989	66745167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_66745000_66745200
Isoform_195187_14	chr9	-	178	1	Intergenic	novelGene_11432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66757616	66757438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_66757400_66757600
Isoform_195189_34	chr13	+	176	1	Intergenic	novelGene_3104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	58594138	58594314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_58594100_58594300
Isoform_195190_12	chr9	-	186	1	Intergenic	novelGene_11434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	66851438	66851252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_66851300_66851400
Isoform_195192_4	chr9	+	178	1	Intergenic	novelGene_11435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTTTTTTAAATGG	8442	False	NA	NA	False	NA	NA	NA	66881018	66881196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_66881000_66881200
Isoform_195193_39	chr9	-	178	1	Intergenic	novelGene_11436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGTAGTTCAGC	9517	False	NA	NA	False	NA	NA	NA	66907088	66906910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_66906900_66907100
Isoform_195196_13	chr9	-	2200	1	NIC	ENSMUSG00000032366.16	novel	2890	8	NA	NA	-20	-7950	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66951209	66949009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_66949000_66951200
Isoform_195197_55	chr9	-	168	1	Intergenic	novelGene_11437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATGTGACTGA	NA	False	NA	NA	False	NA	NA	NA	66979496	66979328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_66979300_66979500
Isoform_195198_37	chr11	-	159	1	Intergenic	novelGene_1496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	50058407	50058248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_50058200_50058400
Isoform_195199_5	chr9	-	2501	1	ISM	ENSMUSG00000052698.16	ENSMUST00000040025.14	12132	58	340108	8	11812	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATGAACTTGTGTGAA	NA	False	NA	NA	False	AATAAA	-7	NA	67126877	67124376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_67124400_67126900
Isoform_195200_29	chr9	-	169	1	Intergenic	novelGene_11438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTTAAAAAAAAAAAAAGA	1414	False	NA	NA	False	NA	NA	NA	67265510	67265341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_67265300_67265500
Isoform_195202_5	chr9	-	3138	1	Intergenic	novelGene_11439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAACAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	67541316	67538178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_67538200_67541300
Isoform_195204_4	chr9	-	1533	1	FSM	ENSMUSG00000055125.8	ENSMUST00000196844.2	1496	1	-37	0	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGACTTGGGGGGAGA	NA	False	NA	NA	False	AATAAA	-17	NA	67667527	67665994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_67666000_67667500
Isoform_195207_35	chr9	-	184	1	Intergenic	novelGene_11440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGTATACAGAG	NA	False	NA	NA	False	NA	NA	NA	68681134	68680950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_68681000_68681100
Isoform_195208_3	chr9	-	2100	1	Intergenic	novelGene_11441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68786489	68784389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_68784400_68786500
Isoform_195209_3	chr9	-	1913	1	Intergenic	novelGene_11442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAACAGCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68792055	68790142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_68790100_68792100
Isoform_195211_3	chr9	+	1116	1	NIC	ENSMUSG00000032231.15	novel	1447	13	NA	NA	-20	-29048	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69360977	69362093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_69361000_69362100
Isoform_195213_3	chr9	+	160	1	Intergenic	novelGene_11443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAGAAAGAGAGGGGTT	NA	False	NA	NA	False	NA	NA	NA	69571003	69571163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_69571000_69571200
Isoform_195214_9	chr9	-	201	1	Intergenic	novelGene_11444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTTAACATTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	69931340	69931139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_69931100_69931300
Isoform_195215_35	chr9	+	168	1	Intergenic	novelGene_11445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAAGGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	69933233	69933401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_69933200_69933400
Isoform_195220_96	chr9	+	172	1	Intergenic	novelGene_11446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAAAGAA	2327	False	NA	3	True	NA	NA	NA	70323956	70324128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_70324000_70324100
Isoform_195221_8	chr9	-	168	1	Intergenic	novelGene_11447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAGTATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70330482	70330314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_70330300_70330500
Isoform_195224_53	chr9	-	173	1	Intergenic	novelGene_11448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	70430495	70430322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_70430300_70430500
Isoform_195226_11	chr9	+	3878	1	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-12	1912	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70450063	70453941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_70450100_70453900
Isoform_195227_3	chr9	-	159	1	Intergenic	novelGene_11449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAATTAAA	1106	False	NA	NA	False	NA	NA	NA	70456785	70456626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_70456600_70456800
Isoform_195228_6	chr9	+	177	1	Intergenic	novelGene_11099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	18287178	18287355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_18287200_18287400
Isoform_195232_73	chr9	+	175	1	Intergenic	novelGene_11450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGATGCATCGAG	757	False	NA	NA	False	NA	NA	NA	70574368	70574543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_70574400_70574500
Isoform_195237_5	chr9	+	2111	1	FSM	ENSMUSG00000096160.3	ENSMUST00000179930.3	840	1	-225	-1046	-225	1046	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	5458	False	NA	NA	False	AATAAA	-11	NA	70759632	70761743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_70759600_70761700
Isoform_195238_3	chr9	+	179	1	Intergenic	novelGene_11451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATGAATTTCCCTCC	NA	False	NA	NA	False	NA	NA	NA	71011168	71011347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_71011200_71011300
Isoform_195239_3	chr9	+	174	1	Intergenic	novelGene_11452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAACGAGAAGCTGAAAT	NA	False	NA	NA	False	NA	NA	NA	71068800	71068974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_71068800_71069000
Isoform_195240_39	chr9	+	178	1	Intergenic	novelGene_11453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGATCGACCAGATAG	NA	False	NA	NA	False	NA	NA	NA	71112829	71113007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_71112800_71113000
Isoform_195241_24	chr9	+	179	1	Intergenic	novelGene_11454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	71209522	71209701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_71209500_71209700
Isoform_195247_114	chr9	-	189	1	Intergenic	novelGene_11455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAAGAAAAGCCACCT	NA	False	NA	NA	False	NA	NA	NA	71458381	71458192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_71458200_71458400
Isoform_195249_7	chr9	-	176	1	Intergenic	novelGene_11456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACCTCCAAGGTTGA	NA	False	NA	NA	False	NA	NA	NA	71728858	71728682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_71728700_71728900
Isoform_195253_8	chr9	+	241	1	Intergenic	novelGene_11458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCAGCATTAGACTCC	NA	False	NA	NA	False	AAAAAG	-37	NA	72076229	72076470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72076200_72076500
Isoform_195254_43	chr1	+	177	1	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	74225502	74225679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_74225500_74225700
Isoform_195255_4	chr9	-	173	1	Intergenic	novelGene_11459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGATAAATAAATAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	72112781	72112608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72112600_72112800
Isoform_195256_86	chr11	+	170	1	Intergenic	novelGene_2274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTTTTTTACCC	483	False	NA	-10	True	NA	NA	NA	115277908	115278078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115277900_115278100
Isoform_195257_83	chr9	+	177	1	Intergenic	novelGene_11460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATTAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	72184764	72184941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72184800_72184900
Isoform_195258_3	chr9	-	361	1	FSM	ENSMUSG00000098893.2	ENSMUST00000183380.2	799	1	791	-353	791	353	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAAATAATTATCAGTT	NA	False	NA	NA	False	AATAAA	-4	NA	72199831	72199470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_72199500_72199800
Isoform_195261_3	chr9	-	281	1	Intergenic	novelGene_11461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72309367	72309086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72309100_72309400
Isoform_195262_15	chr9	-	179	1	Intergenic	novelGene_11462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	72336902	72336723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72336700_72336900
Isoform_195264_25	chr9	+	169	1	Intergenic	novelGene_11100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	18794422	18794591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_18794400_18794600
Isoform_195266_188	chr9	+	175	1	Intergenic	novelGene_11463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCATCTGCATCTTTG	NA	False	NA	3	True	NA	NA	NA	72425161	72425336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72425200_72425300
Isoform_195269_6	chr9	-	166	1	Intergenic	novelGene_11465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	4718	False	NA	NA	False	NA	NA	NA	72506245	72506079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72506100_72506200
Isoform_195270_6	chr9	-	173	1	Antisense	novelGene_ENSMUSG00000037674.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72512473	72512300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_72512300_72512500
Isoform_195272_49	chr9	-	3363	1	Genic_Genomic	ENSMUSG00000098573.2_ENSMUSG00000099051.2	novel	NA	NA	NA	NA	627	-1607	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72526175	72522812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_72522800_72526200
Isoform_195276_25	chr9	+	266	1	Intergenic	novelGene_11466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAATTTAAAAAAC	2485	False	NA	NA	False	AATAAA	-10	NA	72540231	72540497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72540200_72540500
Isoform_195278_3	chr9	-	275	1	Intergenic	novelGene_11467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAAGTCGCTGGCCGA	NA	False	NA	NA	False	NA	NA	NA	72544421	72544146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72544100_72544400
Isoform_195279_18	chr9	+	158	1	Intergenic	novelGene_11468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2570	False	NA	NA	False	NA	NA	NA	72553694	72553852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72553700_72553900
Isoform_195280_9	chr9	+	205	1	Intergenic	novelGene_11469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTGAAACACTGTCAC	6968	False	NA	NA	False	NA	NA	NA	72558092	72558297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72558100_72558300
Isoform_195282_52	chr9	-	180	1	Intergenic	novelGene_11470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72574081	72573901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72573900_72574100
Isoform_195283_14	chr9	-	712	1	Intergenic	novelGene_11471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72574613	72573901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72573900_72574600
Isoform_195284_3	chr9	+	517	1	Intergenic	novelGene_11101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	19004933	19005450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_19004900_19005400
Isoform_195285_28	chr15	+	168	1	Intergenic	novelGene_4255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAGAGTAACCAGAGCC	674	False	NA	NA	False	NA	NA	NA	103297416	103297584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_103297400_103297600
Isoform_195286_10	chr9	-	177	1	Intergenic	novelGene_11472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	72591303	72591126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72591100_72591300
Isoform_195288_78	chr9	+	170	1	FSM	ENSMUSG00000102411.2	ENSMUST00000194508.2	2749	1	1408	1171	1408	-1171	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	72636829	72636999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72636800_72637000
Isoform_195321_3	chr9	-	236	1	Intergenic	novelGene_11473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACATTTGTGTGCCTGTGT	NA	False	NA	NA	False	AATAAA	-8	NA	72666863	72666627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72666600_72666900
Isoform_195324_7	chr9	+	207	1	Intergenic	novelGene_11474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAATTAAAAAAAAAAAAAA	1410	False	NA	NA	False	AATGAA	-9	NA	72672670	72672877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72672700_72672900
Isoform_195325_258	chr9	-	185	1	Intergenic	novelGene_11475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTTTTTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	72680628	72680443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72680400_72680600
Isoform_195326_141	chr1	+	184	1	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATTTTAAAAAAAGA	5039	False	NA	NA	False	NA	NA	NA	74357496	74357680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_74357500_74357700
Isoform_195328_177	chr9	+	158	1	Intergenic	novelGene_11476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	72708976	72709134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72709000_72709100
Isoform_195332_6	chr9	+	178	1	Intergenic	novelGene_11477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCCTTCTGATGCTAT	484	False	NA	NA	False	NA	NA	NA	72748494	72748672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72748500_72748700
Isoform_195333_3	chr9	-	304	1	Intergenic	novelGene_11478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATTAAATATCTT	NA	False	NA	NA	False	NA	NA	NA	72794513	72794209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72794200_72794500
Isoform_195335_9	chr9	+	174	1	FSM	ENSMUSG00000102330.2	ENSMUST00000193259.2	1441	1	-139	1406	-139	-1406	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATAAGAGGGG	NA	False	NA	NA	False	NA	NA	NA	72796187	72796361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72796200_72796400
Isoform_195336_22	chr9	+	176	1	FSM	ENSMUSG00000102330.2	ENSMUST00000193259.2	1441	1	397	868	397	-868	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGTATTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	72796723	72796899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_72796700_72796900
Isoform_195338_3	chr9	-	177	1	Intergenic	novelGene_11479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATCTTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72878639	72878462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72878500_72878600
Isoform_195339_16	chr9	-	179	1	Intergenic	novelGene_11480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAAAATTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	72899282	72899103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72899100_72899300
Isoform_195341_20	chr9	+	174	1	Intergenic	novelGene_11481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAGTAAAAAA	7134	False	NA	NA	False	NA	NA	NA	72977374	72977548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_72977400_72977500
Isoform_195343_18	chr9	-	178	1	Intergenic	novelGene_11482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGGTTGGTTGGTT	NA	False	NA	-2	True	NA	NA	NA	73000019	72999841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_72999800_7.3e+07
Isoform_195353_30	chr9	+	159	1	Intergenic	novelGene_11483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	6129	False	NA	NA	False	NA	NA	NA	73051026	73051185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_73051000_73051200
Isoform_195355_16	chr9	-	169	1	Intergenic	novelGene_11484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAACTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	73725392	73725223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_73725200_73725400
Isoform_195357_36	chr9	-	176	1	Intergenic	novelGene_11485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	74040925	74040749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_74040700_74040900
Isoform_195358_4	chr9	+	169	1	Intergenic	novelGene_11486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	74069136	74069305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_74069100_74069300
Isoform_195366_5	chr9	-	3337	1	Antisense	novelGene_ENSMUSG00000034593.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATTAAAA	9679	False	NA	NA	False	NA	NA	NA	75062820	75059483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_75059500_75062800
Isoform_195367_41	chr9	-	177	1	Intergenic	novelGene_11102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGATGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	20361711	20361534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_20361500_20361700
Isoform_195370_8	chr9	+	170	1	Intergenic	novelGene_11487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGTTGCCAGACAGT	NA	False	NA	NA	False	NA	NA	NA	75284679	75284849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_75284700_75284800
Isoform_195378_3	chr9	+	272	1	Intergenic	novelGene_11488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGCTTAGAAATG	1817	False	NA	NA	False	NA	NA	NA	75346926	75347198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_75346900_75347200
Isoform_195380_9	chr9	-	175	1	Intergenic	novelGene_11490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGACACAA	NA	False	NA	NA	False	NA	NA	NA	75353508	75353333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_75353300_75353500
Isoform_195381_32	chr9	-	178	1	Intergenic	novelGene_11491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75354296	75354118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_75354100_75354300
Isoform_195386_21	chr9	-	180	1	Intergenic	novelGene_11492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACGAAAAA	NA	False	NA	NA	False	NA	NA	NA	75443714	75443534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_75443500_75443700
Isoform_195387_3	chr9	+	1893	1	Antisense	novelGene_ENSMUSG00000025894.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4301659	4303552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_4301700_4303600
Isoform_195389_24	chr9	-	172	1	Intergenic	novelGene_11493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGGCTCACG	NA	False	NA	NA	False	NA	NA	NA	75543837	75543665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_75543700_75543800
Isoform_195390_27	chr9	-	5298	1	Intergenic	novelGene_11494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAATTGTCTTAGCTCC	183	False	NA	NA	False	NA	NA	NA	75643046	75637748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_75637700_75643000
Isoform_195392_4	chr9	+	2737	1	Intergenic	novelGene_11495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCGGCCGCCAGC	NA	False	NA	NA	False	NA	NA	NA	75640178	75642915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_75640200_75642900
Isoform_195403_3	chr9	+	161	1	Intergenic	novelGene_11103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAAATAT	NA	False	NA	NA	False	NA	NA	NA	20383379	20383540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_20383400_20383500
Isoform_195405_8	chr9	+	181	1	Intergenic	novelGene_11497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATGGCAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	76492670	76492851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_76492700_76492900
Isoform_195407_34	chr9	+	162	1	Intergenic	novelGene_11498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	77400583	77400745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_77400600_77400700
Isoform_195408_3	chr9	+	173	1	Intergenic	novelGene_11499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAATTACATAACAGAG	3116	False	NA	NA	False	NA	NA	NA	77655807	77655980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_77655800_77656000
Isoform_195409_10	chr9	-	151	1	Intergenic	novelGene_11500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATGTATTTCAAAATTG	NA	False	NA	NA	False	NA	NA	NA	77659701	77659550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_77659600_77659700
Isoform_195412_48	chr9	-	178	1	Intergenic	novelGene_11501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77750123	77749945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_77749900_77750100
Isoform_195418_22	chr9	-	171	1	Intergenic	novelGene_11502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTGGTTCGA	NA	False	NA	NA	False	NA	NA	NA	77906254	77906083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_77906100_77906300
Isoform_19542_7	chr11	+	2651	16	FSM	ENSMUSG00000020122.17	ENSMUST00000102884.10	2943	16	9	283	1	-283	multi-exon	FALSE	canonical	0	0	junction_1	1.92757763930679	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTTACTATTGATTG	NA	False	NA	NA	False	AATAAA	-25	NA	16702211	16837640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_16702571_16808895_16809048_16810067_16810252_16812945_16813081_16817230_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140
Isoform_195422_11	chr9	+	179	1	Intergenic	novelGene_11503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	78007935	78008114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78007900_78008100
Isoform_195423_3	chr9	+	2433	1	Genic_Genomic	ENSMUSG00000009828.16	novel	NA	NA	NA	NA	-514	-2319	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGGAAAAAATTTAAAAAA	NA	False	NA	NA	False	AAGAAA	-39	NA	78015959	78018392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_78016000_78018400
Isoform_195425_8	chr9	+	2924	1	NIC	ENSMUSG00000009828.16	novel	735	2	NA	NA	6	-2256	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78020571	78023495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_78020600_78023500
Isoform_195426_8	chr9	-	328	1	FSM	ENSMUSG00002076161.1	ENSMUST00020183253.1	331	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTCCTGCAATTTA	NA	False	NA	-3	True	NA	NA	NA	78082914	78082586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78082600_78082900
Isoform_195436_7	chr9	+	232	2	Intergenic	novelGene_11505	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTGCGTCGTCATT	NA	False	NA	NA	False	AATAAA	-18	NA	78153733	78180322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78153884_78180240
Isoform_19544_894	chr11	+	2809	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	55	-5	55	5	multi-exon	FALSE	canonical	3	579	junction_5	55.0962793662149	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTGTGTCAGCTTTG	NA	False	NA	16	True	AATAAA	-20	NA	17109317	17150380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
Isoform_195444_6	chr9	-	203	1	Intergenic	novelGene_11506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAACAAAAAA	247	False	NA	NA	False	NA	NA	NA	78209047	78208844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78208800_78209000
Isoform_195445_48	chr15	-	178	1	Intergenic	novelGene_4197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAGAAAAATA	8564	False	NA	NA	False	NA	NA	NA	99698282	99698104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_99698100_99698300
Isoform_195446_55	chr5	+	177	1	Intergenic	novelGene_8628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	92364079	92364256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_92364100_92364300
Isoform_195447_74	chr9	-	181	1	Intergenic	novelGene_11509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	78257988	78257807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78257800_78258000
Isoform_195448_5	chr9	-	178	1	Intergenic	novelGene_11510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACATTTGGT	NA	False	NA	NA	False	NA	NA	NA	78259740	78259562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78259600_78259700
Isoform_195451_25	chr9	+	239	1	Intergenic	novelGene_11504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCGTCGTCATTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	78153640	78153879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78153600_78153900
Isoform_195456_11	chr9	-	912	1	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	0	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAT	NA	False	NA	NA	False	AATACA	-8	NA	20432713	20431801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_20431800_20432700
Isoform_195457_242	chr9	+	172	1	Intergenic	novelGene_11511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTCGAGACAGG	NA	False	NA	5	True	NA	NA	NA	78279007	78279179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78279000_78279200
Isoform_195458_6	chr9	-	176	1	Intergenic	novelGene_11512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTACATTCTTT	NA	False	NA	NA	False	NA	NA	NA	78298136	78297960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78298000_78298100
Isoform_195459_11	chr9	+	2567	1	Genic_Genomic	ENSMUSG00000070291.5	novel	NA	NA	NA	NA	-3	-25247	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTATT	9039	False	NA	NA	False	TTTAAA	-6	NA	78303055	78305622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_78303100_78305600
Isoform_195460_22	chr9	-	177	1	Intergenic	novelGene_11104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAGGAAAACCT	NA	False	NA	NA	False	NA	NA	NA	20437566	20437389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_20437400_20437600
Isoform_195461_12	chr9	+	196	1	Intergenic	novelGene_11513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAACAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	78305918	78306114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78305900_78306100
Isoform_195463_3	chr9	+	166	1	Intergenic	novelGene_11514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATATAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	78322253	78322419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78322300_78322400
Isoform_195464_3	chr9	+	167	1	Intergenic	novelGene_11515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTTAAAAAAAGAAAAA	1806	False	NA	NA	False	NA	NA	NA	78329918	78330085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78329900_78330100
Isoform_195465_12	chr9	-	161	1	Intergenic	novelGene_11516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGATAAAGCTGGT	9987	False	NA	NA	False	NA	NA	NA	78332603	78332442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78332400_78332600
Isoform_195466_7	chr9	-	165	1	Intergenic	novelGene_11517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTTTTTAAATTTTT	6066	False	NA	NA	False	NA	NA	NA	78341110	78340945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78340900_78341100
Isoform_195469_9	chr9	+	2254	1	NIC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-2	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78355492	78357746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_78355500_78357700
Isoform_195471_30	chr9	-	175	1	Intergenic	novelGene_11518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATAAAAGACCAGCAG	9925	False	NA	NA	False	NA	NA	NA	78368757	78368582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78368600_78368800
Isoform_195473_8	chr9	+	188	1	Intergenic	novelGene_11519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTGAGCTGAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	78380354	78380542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78380400_78380500
Isoform_195474_13	chr9	-	175	1	Intergenic	novelGene_11520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTAT	NA	False	NA	NA	False	NA	NA	NA	78383179	78383004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78383000_78383200
Isoform_195477_3	chr9	+	4247	1	Antisense	novelGene_ENSMUSG00000037742.15_AS_novelGene_ENSMUSG00000076138.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGAGTGCGGCCGGAGT	NA	False	NA	NA	False	NA	NA	NA	78384436	78388683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_78384400_78388700
Isoform_195481_6	chr2	+	219	1	FSM	ENSMUSG00000082536.2	ENSMUST00000118928.2	1365	1	1288	-142	1288	142	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTTGTGGACCAT	NA	False	NA	NA	False	AGTAAA	-45	NA	40447051	40447270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_+_40447100_40447300
Isoform_195482_21	chr9	+	220	1	Intergenic	novelGene_11522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTGTGCCTTTAATC	1794	False	NA	NA	False	NA	NA	NA	78397668	78397888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78397700_78397900
Isoform_195483_12	chr9	+	326	1	Intergenic	novelGene_11521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAAATAGACC	1793	False	NA	NA	False	NA	NA	NA	78397667	78397993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78397700_78398000
Isoform_195485_11	chr9	-	186	1	Intergenic	novelGene_11523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78404788	78404602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78404600_78404800
Isoform_195487_32	chr9	+	210	1	Intergenic	novelGene_11524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACGAAGTCAGCAGAGG	NA	False	NA	NA	False	AATAAA	-10	NA	78412806	78413016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78412800_78413000
Isoform_195488_41	chr9	-	177	1	Intergenic	novelGene_11525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	78417331	78417154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78417200_78417300
Isoform_19549_10	chr11	+	2764	5	NIC	ENSMUSG00000033953.11	novel	2859	6	NA	NA	55	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	276.552888251054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	False	NA	11	True	AATAAA	-15	NA	17109317	17150375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_17109543_17142956_17143134_17144216_17144277_17144668_17144854_17148258
Isoform_195490_33	chr9	+	177	1	Intergenic	novelGene_11526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	78424740	78424917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78424700_78424900
Isoform_195494_19	chr9	+	177	1	Intergenic	novelGene_11527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAGATTAAAT	9943	False	NA	NA	False	NA	NA	NA	78458153	78458330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78458200_78458300
Isoform_195495_91	chr15	-	177	1	Intergenic	novelGene_4022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79555843	79555666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_79555700_79555800
Isoform_195497_12	chr9	-	176	1	Intergenic	novelGene_11529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTTAAATATGGGTA	NA	False	NA	NA	False	NA	NA	NA	78509139	78508963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78509000_78509100
Isoform_195498_18	chr9	+	205	1	Intergenic	novelGene_11530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6317	False	NA	NA	False	NA	NA	NA	78527045	78527250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78527000_78527200
Isoform_195499_31	chr9	-	3326	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-74	-2051	-74	2051	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCACATCT	NA	False	NA	NA	False	NA	NA	NA	78729194	78725868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_78725900_78729200
Isoform_195509_3	chr9	-	178	1	Intergenic	novelGene_11531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTTATTTA	NA	False	NA	NA	False	NA	NA	NA	78738572	78738394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_78738400_78738600
Isoform_195510_5	chr9	-	177	1	Intergenic	novelGene_11532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATTTTTTAATTAAA	NA	False	NA	NA	False	NA	NA	NA	79060987	79060810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_79060800_79061000
Isoform_195512_5	chr9	+	168	1	Intergenic	novelGene_11533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAATAGGCCTACTAA	NA	False	NA	NA	False	NA	NA	NA	79668311	79668479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_79668300_79668500
Isoform_195513_3	chr9	+	159	1	Intergenic	novelGene_11534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGGGAAAAAAGTATCTT	8965	False	NA	NA	False	NA	NA	NA	79802613	79802772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_79802600_79802800
Isoform_195516_15	chr9	-	275	1	Intergenic	novelGene_11535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	79993978	79993703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_79993700_79994000
Isoform_195519_13	chr9	-	172	1	Intergenic	novelGene_11536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81459496	81459324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_81459300_81459500
Isoform_195521_620	chr9	+	1151	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	-71	-305	-57	14	mono-exon	FALSE	NA	NA	NA	NA	NA	620	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTTCAAGGACTGAGTC	NA	False	NA	NA	False	NA	NA	NA	81559593	81560744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_81559600_81560700
Isoform_19553_384	chr11	+	1999	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	2	1	2	-1	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTGGAGGCGTTG	2473	False	NA	7	True	AATAAA	-9	NA	17161919	17183795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
Isoform_195532_77	chr9	-	177	1	Intergenic	novelGene_11537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	81974912	81974735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_81974700_81974900
Isoform_19554_154	chr11	+	2024	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	-21	-1	-21	1	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGAGGCGTTGAT	2450	False	NA	9	True	AATAAA	-11	NA	17161896	17183797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
Isoform_195542_12	chr9	+	4257	1	Intergenic	novelGene_11538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCATGATATTATTTA	NA	False	NA	NA	False	NA	NA	NA	82816849	82821106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_82816800_82821100
Isoform_195544_289	chr9	+	543	1	FSM	ENSMUSG00000058838.10	ENSMUST00000078766.10	467	1	-38	-38	-38	38	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCATTACATTA	NA	False	NA	NA	False	AATAAA	-16	NA	83291674	83292217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_83291700_83292200
Isoform_195546_23	chr9	-	173	1	Intergenic	novelGene_11073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3302346	3302173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_3302200_3302300
Isoform_195549_3	chr9	-	1877	1	NIC	ENSMUSG00000032262.14	novel	3001	6	NA	NA	1	-23712	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83688304	83686427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_83686400_83688300
Isoform_195554_3	chr9	+	176	1	Intergenic	novelGene_11540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGGGGTGTTACAG	NA	False	NA	NA	False	NA	NA	NA	84186958	84187134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_84187000_84187100
Isoform_195556_3255	chr9	+	860	1	FSM	ENSMUSG00000099927.2	ENSMUST00000190511.2	798	1	-22	-40	-22	40	mono-exon	FALSE	NA	NA	NA	NA	NA	3255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-11	NA	84306014	84306874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_84306000_84306900
Isoform_195559_11	chrX	+	714	1	FSM	ENSMUSG00000067147.8	ENSMUST00000118791.2	801	1	124	-37	124	37	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAAAAAAGAAAT	NA	False	NA	NA	False	CATAAA	-11	NA	165637330	165638044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_165637300_165638000
Isoform_195567_8	chr9	-	174	1	Intergenic	novelGene_11541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	84307303	84307129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_84307100_84307300
Isoform_195573_3	chr9	-	842	1	FSM	ENSMUSG00000099980.2	ENSMUST00000071172.7	760	1	-40	-42	-40	42	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAATTAAAACAAAAAAA	NA	False	NA	NA	False	CATAAA	-8	NA	85664720	85663878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_85663900_85664700
Isoform_195576_33	chr9	-	189	1	Intergenic	novelGene_11542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	86258263	86258074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_86258100_86258300
Isoform_195580_6	chr9	+	179	1	Intergenic	novelGene_11544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAACA	NA	False	NA	NA	False	NA	NA	NA	87526789	87526968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_87526800_87527000
Isoform_195583_3076	chr9	+	550	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	-34	-35	-34	35	mono-exon	FALSE	NA	NA	NA	NA	NA	3076	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88272855	88273405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_88272900_88273400
Isoform_1956_408	chr10	-	3286	16	NNC	ENSMUSG00000038446.9	novel	3534	15	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2694511980113	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTGCTGAGTTCATTG	NA	False	NA	-5	True	AATAAA	-17	NA	40759109	40707618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_40708454_40708501_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
Isoform_19560_66	chr11	+	2011	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-9	979	6	-979	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGAGTTTGAAATAATT	7322	False	NA	NA	False	AATAAA	-25	NA	17207584	17218197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
Isoform_195608_16	chr9	-	182	1	Intergenic	novelGene_11545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACAAAAACAATGTG	4367	False	NA	NA	False	NA	NA	NA	88375886	88375704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_88375700_88375900
Isoform_195609_4	chr9	+	178	1	Intergenic	novelGene_11546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAATAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	88376811	88376989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_88376800_88377000
Isoform_195611_27	chr9	-	191	1	Intergenic	novelGene_11105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACTATTTGAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	20746846	20746655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_20746700_20746800
Isoform_195619_22	chr9	-	172	1	Intergenic	novelGene_11547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGTAAATGTT	8883	False	NA	NA	False	NA	NA	NA	88471400	88471228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_88471200_88471400
Isoform_19562_477	chr11	+	1045	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-9	1945	6	607	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACGGTTGTATGTCCTG	7322	False	NA	23	True	AATAAA	-24	NA	17207584	17217231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
Isoform_195621_5	chr9	+	243	1	Intergenic	novelGene_11548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTCATGATTCTAGA	NA	False	NA	NA	False	NA	NA	NA	88471955	88472198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_88472000_88472200
Isoform_195622_20	chr9	+	177	1	Intergenic	novelGene_11106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20772207	20772384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_20772200_20772400
Isoform_195623_31	chr9	-	183	1	Intergenic	novelGene_11549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATAATGCTA	NA	False	NA	NA	False	NA	NA	NA	88621037	88620854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_88620900_88621000
Isoform_195626_4	chr9	+	250	1	Intergenic	novelGene_11550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCATGATTCTAGACT	NA	False	NA	NA	False	NA	NA	NA	88731285	88731535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_88731300_88731500
Isoform_195629_15	chr9	-	175	1	Intergenic	novelGene_11551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGGGTCGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	88965895	88965720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_88965700_88965900
Isoform_195631_3	chr9	-	4519	1	Antisense	novelGene_ENSMUSG00000100838.2_AS_novelGene_ENSMUSG00000066442.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACTAGGTGTTCAACAC	NA	False	NA	NA	False	NA	NA	NA	89098183	89093664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_89093700_89098200
Isoform_195634_3	chr9	+	166	1	Intergenic	novelGene_11552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAAGAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89824166	89824332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_89824200_89824300
Isoform_195635_18	chr9	-	172	1	Intergenic	novelGene_11553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	89965826	89965654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_89965700_89965800
Isoform_195636_6	chr9	-	175	1	Intergenic	novelGene_11107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGGTTCTTTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	20798781	20798606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_20798600_20798800
Isoform_195637_9	chr9	+	2660	1	Antisense	novelGene_ENSMUSG00000062270.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGCACA	NA	False	NA	NA	False	NA	NA	NA	89971295	89973955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_89971300_89974000
Isoform_195638_9	chr9	+	182	1	Intergenic	novelGene_11554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGATTTCATTATG	NA	False	NA	NA	False	NA	NA	NA	89998895	89999077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_89998900_89999100
Isoform_195639_31	chr9	+	2226	1	FSM	ENSMUSG00000096647.3	ENSMUST00000178436.3	871	1	-54	-1301	-54	1301	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATTATTTTCA	NA	False	NA	NA	False	AATACA	-17	NA	90000935	90003161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_90000900_90003200
Isoform_195640_53	chr9	-	177	1	Intergenic	novelGene_11555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90020970	90020793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_90020800_90021000
Isoform_195642_70	chr9	+	176	1	Intergenic	novelGene_11556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTAGTC	NA	False	NA	NA	False	NA	NA	NA	90100027	90100203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_90100000_90100200
Isoform_195643_11	chr9	-	177	1	Intergenic	novelGene_11557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAATTGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90180719	90180542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_90180500_90180700
Isoform_195644_12	chr9	-	198	1	Intergenic	novelGene_11558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTTCATTGTCA	NA	False	NA	NA	False	NA	NA	NA	90278730	90278532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_90278500_90278700
Isoform_195646_75	chr9	+	177	1	Intergenic	novelGene_11559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	91221735	91221912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_91221700_91221900
Isoform_195647_19	chr9	+	2344	1	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-107	-19397	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAGAAAAGAA	NA	False	NA	NA	False	GGGGCT	-18	NA	92132287	92134631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_92132300_92134600
Isoform_195648_14	chr9	-	2140	1	Antisense	novelGene_ENSMUSG00000032369.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92147673	92145533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_92145500_92147700
Isoform_195649_4	chr9	-	6674	1	Intergenic	novelGene_11560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	241	False	NA	NA	False	NA	NA	NA	92436291	92429617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_92429600_92436300
Isoform_195653_3	chr9	+	3824	1	Intergenic	novelGene_11561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	93205874	93209698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_93205900_93209700
Isoform_195654_22	chr9	+	2626	1	Intergenic	novelGene_11562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95330937	95333563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_95330900_95333600
Isoform_195659_13	chr9	+	2672	1	Antisense	novelGene_ENSMUSG00000032407.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAGCACATTATTGTG	NA	False	NA	NA	False	NA	NA	NA	95342006	95344678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_95342000_95344700
Isoform_195664_10	chr9	-	182	1	Intergenic	novelGene_11563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCTGGCACCTTCAAC	7757	False	NA	NA	False	NA	NA	NA	95400016	95399834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_95399800_95400000
Isoform_195665_3	chr9	-	193	1	Intergenic	novelGene_11564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACTATAGACAGAA	NA	False	NA	NA	False	NA	NA	NA	95420482	95420289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_95420300_95420500
Isoform_195666_5	chr9	+	2418	1	FSM	ENSMUSG00000064225.7	ENSMUST00000079597.7	8367	1	-29	5978	-29	-5978	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCCAAATGACTGGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	95441680	95444098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95441700_95444100
Isoform_195667_35	chr9	+	2123	1	FSM	ENSMUSG00000064225.7	ENSMUST00000079597.7	8367	1	274	5970	274	-5970	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGGTCCTCAAACGT	NA	False	NA	NA	False	AATAAA	-24	NA	95441983	95444106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_95442000_95444100
Isoform_195669_11	chr9	-	174	1	Intergenic	novelGene_11565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8672	False	NA	NA	False	NA	NA	NA	95503230	95503056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_95503100_95503200
Isoform_19567_8	chr11	+	1345	5	FSM	ENSMUSG00000000581.9	ENSMUST00000156784.2	684	5	-51	-610	43	610	multi-exon	TRUE	canonical	2	9	junction_1	280.161895160637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTTGTATGTCCTGACT	7374	False	NA	26	True	AATAAA	-27	NA	17207636	17217234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_17208008_17212647_17212795_17213608_17213676_17213950_17214007_17216530
Isoform_195673_3	chr9	+	174	1	Intergenic	novelGene_11566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATGCTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	95670139	95670313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_95670100_95670300
Isoform_195675_3	chr9	-	2402	1	NIC	ENSMUSG00000049493.14	novel	3704	16	NA	NA	7	-57324	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	95727332	95724930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_95724900_95727300
Isoform_195676_10	chr9	+	170	1	Intergenic	novelGene_11567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGACTTT	NA	False	NA	NA	False	NA	NA	NA	95729625	95729795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_95729600_95729800
Isoform_195677_4	chr9	+	171	1	Intergenic	novelGene_11568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTAAAAGAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	95758302	95758473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_95758300_95758500
Isoform_195680_3	chr9	+	2638	1	NIC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	1	-10339	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAACAACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95836846	95839484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_95836800_95839500
Isoform_195682_186	chr9	-	180	1	Intergenic	novelGene_11569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATTAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	95896664	95896484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_95896500_95896700
Isoform_195688_3	chr9	+	178	1	Intergenic	novelGene_11570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATACAGG	NA	False	NA	NA	False	NA	NA	NA	96029206	96029384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_96029200_96029400
Isoform_195691_120	chr9	+	176	1	Intergenic	novelGene_11571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTAACTGAAAT	NA	False	NA	NA	False	NA	NA	NA	96073067	96073243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_96073100_96073200
Isoform_195692_4	chr9	-	174	1	Intergenic	novelGene_11572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGTGAGCAAGGAC	NA	False	NA	NA	False	NA	NA	NA	96081187	96081013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_96081000_96081200
Isoform_195693_8	chr9	-	150	1	Intergenic	novelGene_11573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGTTATTTACGC	NA	False	NA	NA	False	NA	NA	NA	96086945	96086795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_96086800_96086900
Isoform_195694_8	chr9	+	165	1	Intergenic	novelGene_11574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTACTATTATTA	NA	False	NA	NA	False	NA	NA	NA	96143548	96143713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_96143500_96143700
Isoform_195695_57	chr9	+	162	1	Intergenic	novelGene_11575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTCTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	96178604	96178766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_96178600_96178800
Isoform_19570_8	chr11	+	297	2	FSM	ENSMUSG00000086468.2	ENSMUST00000148496.2	388	2	-14	105	-14	-105	multi-exon	FALSE	canonical	3	24	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTAAGTTTTTAAAGA	NA	False	NA	NA	False	AATAAA	-3	NA	17903989	17904993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_17904086_17904792
Isoform_195700_8	chr9	+	205	1	Intergenic	novelGene_11576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCCCACTCTGCATCAC	NA	False	NA	NA	False	NA	NA	NA	96219976	96220181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_96220000_96220200
Isoform_195701_16	chr6	-	158	1	Intergenic	novelGene_9419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	71541101	71540943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_71540900_71541100
Isoform_195702_96	chr9	+	181	1	Intergenic	novelGene_11108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAGAAAACACA	9339	False	NA	NA	False	NA	NA	NA	20907239	20907420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_20907200_20907400
Isoform_195705_10	chr9	+	226	1	Intergenic	novelGene_11577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTATGAAAAGTCAGGGC	NA	False	NA	NA	False	AATAAA	-9	NA	96358069	96358295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_96358100_96358300
Isoform_195706_4	chr9	-	174	1	Intergenic	novelGene_11578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGCAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	96373644	96373470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_96373500_96373600
Isoform_195707_132	chr9	+	185	1	Intergenic	novelGene_11579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	528	False	NA	NA	False	NA	NA	NA	96392843	96393028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_96392800_96393000
Isoform_195708_6	chr9	-	713	1	Intergenic	novelGene_11580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGACCACTCTTTTG	NA	False	NA	NA	False	AAAAAG	-40	NA	96412517	96411804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_96411800_96412500
Isoform_19571_7	chr11	+	925	2	FSM	ENSMUSG00000086468.2	ENSMUST00000148496.2	388	2	-537	0	-503	0	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAAGGGCTATGCT	NA	False	NA	NA	False	NA	NA	NA	17903466	17905098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_17904086_17904792
Isoform_195711_8	chr9	-	175	1	Intergenic	novelGene_11581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCCCTCCTGCA	NA	False	NA	NA	False	NA	NA	NA	96586602	96586427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_96586400_96586600
Isoform_195712_5	chr9	+	5631	1	Genic_Genomic	ENSMUSG00000102097.2	novel	NA	NA	NA	NA	1687	1696	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96589567	96595198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_96589600_96595200
Isoform_195713_58	chr9	-	184	1	Intergenic	novelGene_11109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3196	False	NA	NA	False	NA	NA	NA	20922653	20922469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_20922500_20922700
Isoform_195715_10	chr9	+	358	1	FSM	ENSMUSG00000062933.8	ENSMUST00000075723.7	490	1	-43	175	-43	-175	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAAACGGTTCCCAGTT	NA	False	NA	NA	False	NA	NA	NA	96777667	96778025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_96777700_96778000
Isoform_195723_3	chr9	-	189	1	Intergenic	novelGene_11582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTTTACTCCAAGAAT	NA	False	NA	NA	False	NA	NA	NA	96904444	96904255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_96904300_96904400
Isoform_195724_16	chr9	-	172	1	Intergenic	novelGene_11583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATGTTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	96914861	96914689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_96914700_96914900
Isoform_195725_3	chr9	+	231	1	Intergenic	novelGene_11584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96951825	96952056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_96951800_96952100
Isoform_195726_49	chr9	-	176	1	Intergenic	novelGene_11585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	96952524	96952348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_96952300_96952500
Isoform_19575_47	chr11	+	4305	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-4	-1449	-4	0	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGCTTTGGGGTATTT	NA	False	NA	3	True	TATAAA	-15	NA	19874437	19974026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_19576_9	chr11	+	4674	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-374	-1448	-307	-1	multi-exon	TRUE	canonical	3	51	junction_2	8.95767827062348	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	NA	False	NA	2	True	TATAAA	-14	NA	19874067	19974025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_195762_56	chr9	-	178	1	Intergenic	novelGene_11110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATCCAAAACCC	6870	False	NA	NA	False	NA	NA	NA	20934922	20934744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_20934700_20934900
Isoform_195763_115	chr7	+	171	1	Intergenic	novelGene_10242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101798107	101798278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_101798100_101798300
Isoform_195768_6	chr9	+	178	1	Intergenic	novelGene_11586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	98002934	98003112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_98002900_98003100
Isoform_195769_10	chr9	+	153	1	Intergenic	novelGene_11587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	98255686	98255839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_98255700_98255800
Isoform_195771_156	chr9	+	176	1	Intergenic	novelGene_11588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGACCT	NA	False	NA	NA	False	NA	NA	NA	98326050	98326226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_98326000_98326200
Isoform_195772_77	chr9	-	197	1	Intergenic	novelGene_11589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAACCTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	98438532	98438335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_98438300_98438500
Isoform_195774_61	chr9	-	166	1	Intergenic	novelGene_11590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGAACTCTCAG	NA	False	NA	NA	False	NA	NA	NA	98613047	98612881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_98612900_98613000
Isoform_195775_16	chr9	+	1272	1	FSM	ENSMUSG00000091080.3	ENSMUST00000170349.3	883	1	-83	-306	-83	306	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATGTTGCTGTCTGTT	NA	False	NA	NA	False	TATAAA	-14	NA	98724472	98725744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_98724500_98725700
Isoform_195777_4	chr9	+	173	1	Intergenic	novelGene_11591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATGTTGGCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	98725810	98725983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_98725800_98726000
Isoform_195778_18	chr9	+	3474	1	FSM	ENSMUSG00000063058.3	ENSMUST00000071302.3	881	1	-10	-2583	-10	2583	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAACAAGACTCTAG	NA	False	NA	NA	False	AATAAA	-18	NA	98738536	98742010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_98738500_98742000
Isoform_195779_64	chr9	+	1809	1	FSM	ENSMUSG00000090470.3	ENSMUST00000167951.3	1817	1	6	2	6	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTGAGTCAAAAATCATA	NA	False	NA	4	True	AATAAA	-17	NA	98746825	98748634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_98746800_98748600
Isoform_195781_49	chr9	+	177	1	Intergenic	novelGene_11592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGACCAAATAT	NA	False	NA	NA	False	NA	NA	NA	98826157	98826334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_98826200_98826300
Isoform_195782_3	chr9	-	165	1	Intergenic	novelGene_11593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTTTTTAAAATGCCAA	NA	False	NA	NA	False	NA	NA	NA	98863769	98863604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_98863600_98863800
Isoform_195783_3	chr9	-	166	1	Intergenic	novelGene_11111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	7620	False	NA	NA	False	NA	NA	NA	20971690	20971524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_20971500_20971700
Isoform_195784_17	chr9	+	157	1	Intergenic	novelGene_11594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAAAATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	98971660	98971817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_98971700_98971800
Isoform_195785_3	chr9	+	170	1	Intergenic	novelGene_11595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAAGGCAACCGGG	NA	False	NA	NA	False	NA	NA	NA	99029750	99029920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_99029800_99029900
Isoform_195786_123	chr9	+	397	1	Intergenic	novelGene_11596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99052660	99053057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_99052700_99053100
Isoform_19579_20	chr11	+	4563	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-262	-1449	-195	0	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGCTTTGGGGTATTT	NA	False	NA	3	True	TATAAA	-15	NA	19874179	19974026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_195791_65	chr9	-	171	1	Intergenic	novelGene_11597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAATCTATATGAA	1063	False	NA	NA	False	NA	NA	NA	99157389	99157218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_99157200_99157400
Isoform_195793_27	chrX	-	182	1	Intergenic	novelGene_12318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGGATGAAGTA	NA	False	NA	NA	False	NA	NA	NA	163244393	163244211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_163244200_163244400
Isoform_1958_24	chr10	-	3537	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	-6	3	-6	-3	multi-exon	FALSE	canonical	3	163	junction_10	18.6027208894236	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCTGCTGAGTTCATT	NA	False	NA	-6	True	AATAAA	-16	NA	40759313	40707619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
Isoform_195800_4	chr9	+	186	1	Intergenic	novelGene_11599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGACAAATGTCAAAC	NA	False	NA	NA	False	NA	NA	NA	99441103	99441289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_99441100_99441300
Isoform_195801_6	chr9	-	858	1	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-7	-16457	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAAAACAAA	NA	False	NA	NA	False	AAAAAG	-41	NA	99450709	99449851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_99449900_99450700
Isoform_195802_5	chr9	-	1103	1	Genic_Genomic	ENSMUSG00000032468.12	novel	NA	NA	NA	NA	-2	-16457	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAAAACAAA	NA	False	NA	NA	False	AAAAAG	-41	NA	99450954	99449851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_99449900_99451000
Isoform_195804_6	chr9	+	177	1	Intergenic	novelGene_11600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAATGTCCAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	99468849	99469026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_99468800_99469000
Isoform_195805_40	chr9	-	174	1	Intergenic	novelGene_11601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAACTAGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	99476372	99476198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_99476200_99476400
Isoform_195806_7	chr9	-	184	1	Intergenic	novelGene_11602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAGAA	9241	False	NA	NA	False	NA	NA	NA	99490257	99490073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_99490100_99490300
Isoform_195808_12	chr9	-	175	1	Intergenic	novelGene_11603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	99557663	99557488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_99557500_99557700
Isoform_195809_9	chr9	+	181	1	Intergenic	novelGene_11604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGGTTAACTGGAC	NA	False	NA	NA	False	NA	NA	NA	99569340	99569521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_99569300_99569500
Isoform_195811_15	chr9	+	258	1	Intergenic	novelGene_11605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGGGCCTTTGAAAA	624	False	NA	NA	False	AAAAAG	-14	NA	99576426	99576684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_99576400_99576700
Isoform_195813_4	chr9	-	178	1	Intergenic	novelGene_11606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	99765261	99765083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_99765100_99765300
Isoform_195814_7	chr9	-	166	1	Intergenic	novelGene_11112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTAAAAAGAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	21007124	21006958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21007000_21007100
Isoform_195817_26	chr2	-	176	1	Intergenic	novelGene_6618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151404827	151404651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_151404700_151404800
Isoform_195819_11	chr9	+	192	1	Intergenic	novelGene_11608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGAAGAAACAGATTTAAA	2962	False	NA	NA	False	NA	NA	NA	100652189	100652381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_100652200_100652400
Isoform_19582_5	chr11	+	1422	2	NNC	ENSMUSG00000045671.18	novel	2852	6	NA	NA	-4	-72102	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCATTTCGTTTTTATT	NA	False	NA	NA	False	AGTAAA	-19	NA	19874437	19896031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_19874957_19895128
Isoform_195820_3	chr9	-	2948	1	Antisense	novelGene_ENSMUSG00000103624.2_AS_novelGene_ENSMUSG00000037286.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGCTGTTTTTAATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	100763505	100760557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_100760600_100763500
Isoform_195822_3	chr9	-	175	1	Intergenic	novelGene_11609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATCAGATTTGGC	NA	False	NA	NA	False	NA	NA	NA	100830411	100830236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_100830200_100830400
Isoform_195825_14	chr9	-	172	1	Intergenic	novelGene_11610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAAAAATGAGCCG	NA	False	NA	NA	False	NA	NA	NA	100929544	100929372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_100929400_100929500
Isoform_195827_105	chr9	-	178	1	Intergenic	novelGene_11611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	100950763	100950585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_100950600_100950800
Isoform_195829_3	chr9	+	4050	1	ISM	ENSMUSG00000066415.5	ENSMUST00000085177.5	4889	2	21133	2	21133	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTAGAATTTTTTTTC	NA	False	NA	NA	False	AGTAAA	-12	NA	100977947	100981997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_100977900_100982000
Isoform_19583_1743	chr11	+	2825	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	2	0	-1	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20151433	20176856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
Isoform_195831_3	chr9	+	155	1	Intergenic	novelGene_11612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	102077042	102077197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_102077000_102077200
Isoform_195832_6	chr9	+	175	1	Intergenic	novelGene_11613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACCTGATACATATT	NA	False	NA	NA	False	NA	NA	NA	102078306	102078481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_102078300_102078500
Isoform_195833_4	chr9	+	161	1	Intergenic	novelGene_11614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAATAAAACTTCAAA	NA	False	NA	NA	False	NA	NA	NA	102494017	102494178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_102494000_102494200
Isoform_195835_16	chr9	+	179	1	Intergenic	novelGene_11615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATTTAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	102518385	102518564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_102518400_102518600
Isoform_195838_55	chr9	+	171	1	Intergenic	novelGene_11616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAATGCTGTCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	102675231	102675402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_102675200_102675400
Isoform_195839_121	chr9	+	177	1	Intergenic	novelGene_11617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAACAACAA	NA	False	NA	NA	False	NA	NA	NA	102677028	102677205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_102677000_102677200
Isoform_195840_5	chr9	-	161	1	Intergenic	novelGene_11618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	102686867	102686706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_102686700_102686900
Isoform_195842_3	chr9	-	200	1	Intergenic	novelGene_11113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCCTTTACCAGGG	NA	False	NA	NA	False	NA	NA	NA	21044323	21044123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21044100_21044300
Isoform_195844_12	chr9	-	203	1	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	15893	665	9105	-665	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTGCTCTTGCAGAG	NA	False	NA	NA	False	NA	NA	NA	21045385	21045182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_21045200_21045400
Isoform_195845_23	chr9	-	190	1	Intergenic	novelGene_11619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGTCAGCTCCTATAAA	NA	False	NA	NA	False	NA	NA	NA	102983122	102982932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_102982900_102983100
Isoform_195846_10	chr9	-	176	1	Intergenic	novelGene_11620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103002458	103002282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_103002300_103002500
Isoform_195847_13	chr9	+	177	1	Intergenic	novelGene_11621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAAGCTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	103029070	103029247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_103029100_103029200
Isoform_195848_3	chr9	-	1825	1	NIC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	-1	-9905	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103079329	103077504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_103077500_103079300
Isoform_195849_12	chr9	+	380	1	Intergenic	novelGene_11622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	103077974	103078354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_103078000_103078400
Isoform_195851_9	chr9	+	781	1	FSM	ENSMUSG00000032555.11	ENSMUST00000189631.2	769	1	-31	19	-15	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACTAAAAAAAAAAAAAAA	938	False	NA	NA	False	NA	NA	NA	103182398	103183179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_103182400_103183200
Isoform_195853_6	chr9	-	174	1	Antisense	novelGene_ENSMUSG00000032555.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9235	False	NA	NA	False	NA	NA	NA	103212969	103212795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_103212800_103213000
Isoform_195871_16	chr9	-	1985	3	NNC	ENSMUSG00000032803.16	novel	3741	5	NA	NA	9551	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103232545	103230302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_103231736_103231885_103231933_103232040
Isoform_195892_33	chr9	+	156	1	Intergenic	novelGene_11624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	103272052	103272208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_103272100_103272200
Isoform_195893_7	chr9	-	172	1	Intergenic	novelGene_11114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAACCTGTACTAA	9504	False	NA	NA	False	NA	NA	NA	21067683	21067511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21067500_21067700
Isoform_195894_3	chr9	+	1133	1	Genic_Genomic	ENSMUSG00000086236.10	novel	NA	NA	NA	NA	-749	-19854	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATTCTCGGCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	103300027	103301160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_103300000_103301200
Isoform_195895_25	chr9	-	181	1	Intergenic	novelGene_11625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGATTTTTAAAAAAA	2990	False	NA	NA	False	NA	NA	NA	103486372	103486191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_103486200_103486400
Isoform_195896_3	chr9	+	182	1	Intergenic	novelGene_11626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATTTAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	103841333	103841515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_103841300_103841500
Isoform_195897_52	chr9	+	173	1	Intergenic	novelGene_11115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGTGCAC	NA	False	NA	13	True	NA	NA	NA	21071064	21071237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21071100_21071200
Isoform_195900_38	chr9	-	169	1	Intergenic	novelGene_11627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAAAGTTGAAAG	9802	False	NA	NA	False	NA	NA	NA	104093206	104093037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_104093000_104093200
Isoform_195901_28	chr9	-	181	1	Intergenic	novelGene_11628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGCAGGATA	NA	False	NA	NA	False	NA	NA	NA	104190916	104190735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_104190700_104190900
Isoform_195904_12	chr9	+	173	1	Intergenic	novelGene_11629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAAAAAAAGAATGG	NA	False	NA	NA	False	NA	NA	NA	104288776	104288949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_104288800_104288900
Isoform_195905_3	chr9	-	233	1	Intergenic	novelGene_11630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAAAGTAGAGT	NA	False	NA	NA	False	NA	NA	NA	104709652	104709419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_104709400_104709700
Isoform_195906_24	chr9	-	176	1	Intergenic	novelGene_11631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	104980860	104980684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_104980700_104980900
Isoform_195908_17	chr9	-	170	1	Intergenic	novelGene_11116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTCATTTTATCCT	6579	False	NA	NA	False	NA	NA	NA	21085411	21085241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21085200_21085400
Isoform_195912_3	chr9	+	157	1	Intergenic	novelGene_11632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	105423080	105423237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_105423100_105423200
Isoform_195913_9	chr9	+	171	1	Intergenic	novelGene_11633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACATTTAAAGCCTT	NA	False	NA	NA	False	NA	NA	NA	106009116	106009287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_106009100_106009300
Isoform_195916_10	chr9	+	2103	1	FSM	ENSMUSG00000020257.14	ENSMUST00000191147.2	3045	1	-43	985	-42	-985	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTTATTCAGGCA	NA	False	NA	NA	False	AATAAA	-14	NA	106048084	106050187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_106048100_106050200
Isoform_195917_4	chr9	-	4926	1	Antisense	novelGene_ENSMUSG00000020257.14_AS_novelGene_ENSMUSG00000065440.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6294	False	NA	NA	False	NA	NA	NA	106060212	106055286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_106055300_106060200
Isoform_195930_13	chr9	+	171	1	Intergenic	novelGene_11635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	106070954	106071125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_106071000_106071100
Isoform_195931_81	chr9	-	164	1	Intergenic	novelGene_11636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1820	False	NA	NA	False	NA	NA	NA	106078497	106078333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106078300_106078500
Isoform_195933_4	chr9	-	190	1	Intergenic	novelGene_11637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACCTGTCTTGAGATAG	3590	False	NA	NA	False	NA	NA	NA	106093227	106093037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106093000_106093200
Isoform_195935_81	chr9	-	178	1	Intergenic	novelGene_11639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAACATTGGG	6046	False	NA	NA	False	NA	NA	NA	106121045	106120867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106120900_106121000
Isoform_195937_3	chr9	-	383	1	Intergenic	novelGene_11117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTTATATATG	8164	False	NA	NA	False	NA	NA	NA	21134919	21134536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21134500_21134900
Isoform_195941_9	chr9	+	162	1	Intergenic	novelGene_11118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAGACAACTA	4405	False	NA	NA	False	NA	NA	NA	21135915	21136077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21135900_21136100
Isoform_195943_3	chr9	+	2087	1	Antisense	novelGene_ENSMUSG00000091735.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCACAGGCT	NA	False	NA	NA	False	NA	NA	NA	106341828	106343915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_106341800_106343900
Isoform_195944_113	chr9	+	174	1	Intergenic	novelGene_11641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCACAGGC	NA	False	NA	NA	False	NA	NA	NA	106343740	106343914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_106343700_106343900
Isoform_195946_5	chr9	-	3603	1	Genic_Genomic	ENSMUSG00000040661.7	novel	NA	NA	NA	NA	1622	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTTTGGTCAAGAAATT	2112	False	NA	-1	True	AATAAA	-12	NA	106568882	106565279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_106565300_106568900
Isoform_195950_15	chr9	-	177	1	Intergenic	novelGene_11642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	106612243	106612066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106612100_106612200
Isoform_195951_3	chr9	-	2403	1	FSM	ENSMUSG00000040661.7	ENSMUST00000191300.2	2418	1	13	2	13	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAAGATT	7326	False	NA	NA	False	NA	NA	NA	106666362	106663959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106664000_106666400
Isoform_195955_3	chr9	-	168	1	Intergenic	novelGene_11643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATATTAAAACA	NA	False	NA	NA	False	NA	NA	NA	106708361	106708193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106708200_106708400
Isoform_195956_45	chr9	-	177	1	Intergenic	novelGene_11644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAGTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	106719406	106719229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106719200_106719400
Isoform_195958_66	chr9	-	6138	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	364	9	364	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGACCTTTGATT	NA	False	NA	31	True	AATAAA	-14	NA	106764263	106758125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106758100_106764300
Isoform_19596_34	chr11	+	2973	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-147	1	-147	-1	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCGCTTGTTGGGTCTA	NA	False	NA	NA	False	AATAAA	-23	NA	20151284	20176855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
Isoform_195960_32	chr9	-	6182	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	321	8	321	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGACCTTTGATTT	NA	False	NA	32	True	AATAAA	-15	NA	106764306	106758124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106758100_106764300
Isoform_195964_8	chr9	-	3223	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	279	3009	279	824	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATGCCGTATGTCATGT	NA	False	NA	49	True	NA	NA	NA	106764348	106761125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106761100_106764300
Isoform_195965_78	chr9	-	3103	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	340	3068	340	765	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGCCAGAGTCCTGGTT	NA	False	NA	-10	True	AGTAAA	-26	NA	106764287	106761184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106761200_106764300
Isoform_195966_235	chr9	-	3084	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	364	3063	364	770	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGTCCTGGTTTAATC	NA	False	NA	-5	True	AGTAAA	-31	NA	106764263	106761179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106761200_106764300
Isoform_195972_7	chr9	-	3080	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	256	3175	256	658	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTCTGTCTGCTGTAT	NA	False	NA	-117	True	AAGAAA	-18	NA	106764371	106761291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_106761300_106764400
Isoform_195976_104	chr9	-	177	1	Intergenic	novelGene_11645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGTATTGCA	NA	False	NA	NA	False	NA	NA	NA	106794445	106794268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106794300_106794400
Isoform_195977_123	chr4	-	177	1	Intergenic	novelGene_7839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120856057	120855880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_120855900_120856100
Isoform_195978_48	chr9	-	188	1	Intergenic	novelGene_11647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATGTGAACGGCTG	NA	False	NA	NA	False	NA	NA	NA	106897753	106897565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_106897600_106897800
Isoform_195979_14	chr9	+	176	1	Intergenic	novelGene_11648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAAAGCTATTG	NA	False	NA	NA	False	NA	NA	NA	107071308	107071484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_107071300_107071500
Isoform_195980_38	chr9	+	181	1	Intergenic	novelGene_11649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	107075380	107075561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_107075400_107075600
Isoform_195981_4	chr9	-	3205	1	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	107215549	107212344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_107212300_107215500
Isoform_195982_22	chr9	-	200	1	Intergenic	novelGene_11119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATTTTTTTTAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	21175588	21175388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21175400_21175600
Isoform_195983_5	chr9	+	833	1	NIC	ENSMUSG00000010067.14	novel	1727	5	NA	NA	114	1023	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAAAAAAAAAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	107431895	107432728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_107431900_107432700
Isoform_195992_6	chr9	+	177	1	Intergenic	novelGene_11650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTTACATATCA	NA	False	NA	NA	False	NA	NA	NA	107524522	107524699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_107524500_107524700
Isoform_195993_3	chr9	+	178	1	Intergenic	novelGene_11651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTGTGATGACAG	NA	False	NA	NA	False	NA	NA	NA	107525780	107525958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_107525800_107526000
Isoform_195995_8	chr9	+	2065	1	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCTAACAATCTAGCTA	682	False	NA	NA	False	NA	NA	NA	107635816	107637881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_107635800_107637900
Isoform_195999_16	chr9	+	163	1	Intergenic	novelGene_11652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAACA	4546	False	NA	NA	False	NA	NA	NA	107660485	107660648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_107660500_107660600
Isoform_196_6	ERCC-00148	+	476	1	FSM	ERCC-00148A	DQ883642	478	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	1	477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00148_+_0_500
Isoform_1960_11	chr10	-	4525	15	NNC	ENSMUSG00000038446.9	novel	3534	15	NA	NA	-4	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	54.1208021419657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCTGCTGAGTTCATT	NA	False	NA	-6	True	AATAAA	-16	NA	40759109	40707619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_40708468_40708501_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
Isoform_196001_130	chr9	+	173	1	Intergenic	novelGene_11653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATTGTTTTCAAAAC	NA	False	NA	NA	False	NA	NA	NA	107672498	107672671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_107672500_107672700
Isoform_196007_19	chr5	-	181	1	Intergenic	novelGene_9044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAGGA	NA	False	NA	NA	False	NA	NA	NA	137345891	137345710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_137345700_137345900
Isoform_196008_16	chr9	+	244	1	Intergenic	novelGene_11654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAATTTTGGGGGGTGC	2434	False	NA	NA	False	AATAAA	-11	NA	107890607	107890851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_107890600_107890900
Isoform_196011_42	chr9	+	157	1	Intergenic	novelGene_11655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6411	False	NA	NA	False	NA	NA	NA	107921402	107921559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_107921400_107921600
Isoform_196021_4	chr9	-	178	1	Intergenic	novelGene_11656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGAAATGATTTTGCT	NA	False	NA	NA	False	NA	NA	NA	107951883	107951705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_107951700_107951900
Isoform_196023_4	chr9	+	176	1	Intergenic	novelGene_11658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATGGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	108073690	108073866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108073700_108073900
Isoform_196054_150	chr10	-	177	1	Intergenic	novelGene_945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66722523	66722346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_66722300_66722500
Isoform_196057_8	chr9	+	177	1	Intergenic	novelGene_11659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATACTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	108132642	108132819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108132600_108132800
Isoform_196058_444	chr9	+	192	1	Intergenic	novelGene_11660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	444	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCATGTGCCTA	NA	False	NA	NA	False	NA	NA	NA	108133063	108133255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108133100_108133300
Isoform_196059_16	chr9	+	176	1	Intergenic	novelGene_11661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATCCAACATT	NA	False	NA	NA	False	NA	NA	NA	108144353	108144529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108144400_108144500
Isoform_196060_37	chr9	+	171	1	Intergenic	novelGene_11662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTAAGGGTGGTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	108159470	108159641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108159500_108159600
Isoform_196061_15	chr9	-	164	1	Intergenic	novelGene_11663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATTTAAAAAAAGACTC	1023	False	NA	-1	True	NA	NA	NA	108160461	108160297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108160300_108160500
Isoform_196062_4	chr9	-	294	1	Intergenic	novelGene_11664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTGCTTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	108165189	108164895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108164900_108165200
Isoform_196064_6	chr9	-	156	1	Intergenic	novelGene_11665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	108176553	108176397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108176400_108176600
Isoform_196079_6	chr9	-	689	1	NIC	ENSMUSG00000104208.2	novel	347	2	NA	NA	340	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTGGCAATGGAGTCT	NA	False	NA	NA	False	NA	NA	NA	108215132	108214443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_108214400_108215100
Isoform_196091_13	chrX	+	206	1	Intergenic	novelGene_11976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGAGCCAGGT	NA	False	NA	NA	False	NA	NA	NA	57017778	57017984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_57017800_57018000
Isoform_196093_3	chr9	+	2819	1	Genic_Genomic	ENSMUSG00000032611.10	novel	NA	NA	NA	NA	-5	-2152	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	5921	False	NA	NA	False	NA	NA	NA	108269998	108272817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_108270000_108272800
Isoform_196097_62	chr9	+	175	1	Intergenic	novelGene_11666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTTAAGGATAA	4692	False	NA	NA	False	NA	NA	NA	108332372	108332547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108332400_108332500
Isoform_196098_11	chr9	+	612	1	NIC	ENSMUSG00000049305.7	novel	3092	2	NA	NA	31	-2090	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAATAAATAAATAA	226	False	NA	NA	False	NA	NA	NA	108337764	108338376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108337800_108338400
Isoform_196099_13	chr9	-	2342	1	Antisense	novelGene_ENSMUSG00000049305.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCAGGC	5308	False	NA	NA	False	AAGAAA	-36	NA	108342425	108340083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_108340100_108342400
Isoform_196101_4	chr9	-	174	1	Intergenic	novelGene_11667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTAAAAATTTTTTT	2024	False	NA	NA	False	NA	NA	NA	108345709	108345535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108345500_108345700
Isoform_196102_13	chr9	-	180	1	Intergenic	novelGene_11668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATAGGATTTGAA	4587	False	NA	NA	False	NA	NA	NA	108354508	108354328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108354300_108354500
Isoform_196103_9	chr9	+	170	1	ISM	ENSMUSG00000006676.17	ENSMUST00000193412.2	753	4	904	18	-263	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108372471	108372641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_108372500_108372600
Isoform_196105_10	chr9	-	176	1	Intergenic	novelGene_11669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATAGCTGCAGT	NA	False	NA	NA	False	NA	NA	NA	108382999	108382823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108382800_108383000
Isoform_196106_6	chr9	-	177	1	Intergenic	novelGene_11670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	108402406	108402229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108402200_108402400
Isoform_196108_5	chr9	-	161	1	Intergenic	novelGene_11120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAATAATAA	8404	False	NA	NA	False	NA	NA	NA	21240039	21239878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21239900_21240000
Isoform_196114_4	chr9	+	1886	1	Antisense	novelGene_ENSMUSG00000064145.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACCATCCAGGGGAAAT	198	False	NA	NA	False	AAAAAG	-14	NA	108480144	108482030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_108480100_108482000
Isoform_196118_48	chr9	+	176	1	Intergenic	novelGene_11671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2866	False	NA	NA	False	NA	NA	NA	108537085	108537261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108537100_108537300
Isoform_196121_11	chr9	-	176	1	Intergenic	novelGene_11672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	108552394	108552218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108552200_108552400
Isoform_196122_4	chr9	-	171	1	Intergenic	novelGene_11673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAGTCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108555160	108554989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108555000_108555200
Isoform_196127_132	chr9	+	200	1	Intergenic	novelGene_11674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACTGGGGATTAGCTTG	5659	False	NA	NA	False	NA	NA	NA	108575614	108575814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108575600_108575800
Isoform_196144_6	chr9	-	219	1	Intergenic	novelGene_11675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATTAAAAAAAAAAAAAAAG	9542	False	NA	NA	False	NA	NA	NA	108640123	108639904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108639900_108640100
Isoform_196146_3	chr9	+	172	1	Intergenic	novelGene_11121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATCTTTAAAAAAAAACT	2344	False	NA	NA	False	NA	NA	NA	21267648	21267820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21267600_21267800
Isoform_196149_11	chr9	+	311	1	Intergenic	novelGene_11676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAGAAAGAAAA	1438	False	NA	NA	False	NA	NA	NA	108833290	108833601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108833300_108833600
Isoform_196151_3	chr9	+	253	1	Antisense	novelGene_ENSMUSG00000025646.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTACATATATATAATC	NA	False	NA	NA	False	NA	NA	NA	108890889	108891142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_108890900_108891100
Isoform_196152_5	chr9	+	358	1	Intergenic	novelGene_11677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	108903253	108903611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108903300_108903600
Isoform_196154_9	chr9	+	520	1	NIC	ENSMUSG00000025645.9	novel	1526	4	NA	NA	0	-9477	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	108911560	108912080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_108911600_108912100
Isoform_196155_3	chr9	-	186	1	Intergenic	novelGene_11678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	108956763	108956577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_108956600_108956800
Isoform_196156_5	chr9	+	173	1	Intergenic	novelGene_11679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTCAGGGTA	NA	False	NA	NA	False	NA	NA	NA	109473250	109473423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_109473200_109473400
Isoform_196158_12	chr9	-	2531	1	FSM	ENSMUSG00000070282.7	ENSMUST00000133495.3	1008	1	-1328	-195	-3	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCACAAAAAACCAAAAACA	NA	False	NA	NA	False	AATAAA	-11	NA	109661777	109659246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_109659200_109661800
Isoform_196159_14	chr9	+	178	1	Intergenic	novelGene_11680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	109663771	109663949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_109663800_109663900
Isoform_196161_7	chr9	+	181	1	Intergenic	novelGene_11681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAATTAAGGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	109681517	109681698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_109681500_109681700
Isoform_196164_4	chr9	+	175	1	Intergenic	novelGene_11682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	109686583	109686758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_109686600_109686800
Isoform_196165_7	chr9	-	286	1	Intergenic	novelGene_11683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	109698109	109697823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_109697800_109698100
Isoform_196166_4	chr9	-	182	1	Intergenic	novelGene_11122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACAGAC	NA	False	NA	NA	False	NA	NA	NA	21293517	21293335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21293300_21293500
Isoform_19617_5	chr11	+	5512	2	FSM	ENSMUSG00000049800.14	ENSMUST00000109586.3	5515	2	-2	5	-2	-5	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATGCTCACAGTTTT	NA	False	NA	12	True	AATAAA	-12	NA	20581976	20603016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_20582274_20597801
Isoform_196172_6	chr9	-	186	1	Intergenic	novelGene_11684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTTAATTTTAACTAT	7996	False	NA	NA	False	NA	NA	NA	109737898	109737712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_109737700_109737900
Isoform_196173_8	chr9	-	175	1	Intergenic	novelGene_11685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTTTTTTAATTAAT	NA	False	NA	NA	False	NA	NA	NA	109758345	109758170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_109758200_109758300
Isoform_196177_22	chr9	+	175	1	Intergenic	novelGene_11686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAAATAGGA	NA	False	NA	NA	False	NA	NA	NA	109808418	109808593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_109808400_109808600
Isoform_196178_135	chr2	-	174	1	Intergenic	novelGene_6110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGCCACCG	NA	False	NA	NA	False	NA	NA	NA	31306577	31306403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31306400_31306600
Isoform_196179_3	chr9	-	183	1	Intergenic	novelGene_11688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATCAGACCCACCAAGAC	7885	False	NA	NA	False	NA	NA	NA	109841562	109841379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_109841400_109841600
Isoform_196182_12	chr9	+	208	1	FSM	ENSMUSG00000105962.2	ENSMUST00000197902.2	1617	1	516	893	516	-893	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCCCTTGTCAGGAT	9112	False	NA	NA	False	AAAAAG	-16	NA	109870763	109870971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_109870800_109871000
Isoform_196183_591	chr12	+	173	1	Intergenic	novelGene_2684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	591	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	False	NA	13	True	NA	NA	NA	81577598	81577771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_81577600_81577800
Isoform_196185_4	chr9	-	1903	1	Antisense	novelGene_ENSMUSG00000032479.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTCAAAACAAAACCAAGTAA	NA	False	NA	NA	False	NA	NA	NA	109909978	109908075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_109908100_109910000
Isoform_196194_9	chr9	+	173	1	Intergenic	novelGene_11690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	109926308	109926481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_109926300_109926500
Isoform_196196_12	chr9	+	345	1	Antisense	novelGene_ENSMUSG00000032480.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAGGTATTTGCT	2230	False	NA	NA	False	NA	NA	NA	109939460	109939805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_109939500_109939800
Isoform_196197_3	chr9	+	176	1	Intergenic	novelGene_11691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGAGCTCAG	1294	False	NA	NA	False	NA	NA	NA	109949573	109949749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_109949600_109949700
Isoform_196198_33	chr9	+	179	1	Intergenic	novelGene_11692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGCACTGAC	5012	False	NA	NA	False	NA	NA	NA	109953291	109953470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_109953300_109953500
Isoform_19620_167	chr11	+	3483	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	35	-4	35	4	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAATTTGTCTGTGTGGG	NA	False	NA	31	True	AGTAAA	-19	NA	21041325	21100327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
Isoform_196200_4	chr9	-	159	1	Intergenic	novelGene_11693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	109955713	109955554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_109955600_109955700
Isoform_196202_18	chr9	+	914	1	Genic_Genomic	ENSMUSG00000002825.9	novel	NA	NA	NA	NA	-2	307	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	2367	False	NA	NA	False	NA	NA	NA	21323130	21324044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_21323100_21324000
Isoform_196204_60	chr5	+	177	1	Intergenic	novelGene_8350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21052597	21052774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_21052600_21052800
Isoform_196207_3	chr9	-	3597	1	Intergenic	novelGene_11696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110040902	110037305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110037300_110040900
Isoform_196209_3	chr9	-	4529	1	Intergenic	novelGene_11697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCTGGGCGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	110059138	110054609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110054600_110059100
Isoform_196210_40	chr9	-	183	1	Intergenic	novelGene_11123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGACAAAATAA	NA	False	NA	NA	False	NA	NA	NA	21325091	21324908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21324900_21325100
Isoform_196225_4	chr9	+	176	1	Intergenic	novelGene_11698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAATATATATTTATTAA	NA	False	NA	NA	False	NA	NA	NA	110098365	110098541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_110098400_110098500
Isoform_196226_6	chr9	-	176	1	Intergenic	novelGene_11699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	110101269	110101093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110101100_110101300
Isoform_196230_3	chr9	-	174	1	Intergenic	novelGene_11700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTGAATCAAGGT	NA	False	NA	NA	False	NA	NA	NA	110119970	110119796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110119800_110120000
Isoform_196234_20	chr9	-	177	1	Intergenic	novelGene_11701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110243812	110243635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110243600_110243800
Isoform_196236_15	chr13	+	169	1	Intergenic	novelGene_3045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	51881686	51881855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_51881700_51881900
Isoform_196237_31	chr9	+	177	1	Intergenic	novelGene_11703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATATC	NA	False	NA	NA	False	NA	NA	NA	110301452	110301629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_110301500_110301600
Isoform_196239_3	chr9	-	1187	1	NIC	ENSMUSG00000054792.16	novel	4530	10	NA	NA	-26	-38068	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2036	False	NA	NA	False	NA	NA	NA	110305684	110304497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_110304500_110305700
Isoform_196240_40	chr9	-	173	1	Intergenic	novelGene_11704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAAGTATCCTTG	NA	False	NA	NA	False	NA	NA	NA	110368590	110368417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110368400_110368600
Isoform_196241_10	chr9	+	173	1	Intergenic	novelGene_11705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATACACATATCT	3432	False	NA	NA	False	NA	NA	NA	110384377	110384550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_110384400_110384600
Isoform_196244_16	chr9	+	181	1	Intergenic	novelGene_11706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATGGAGGATTCGCC	1390	False	NA	NA	False	NA	NA	NA	110424246	110424427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_110424200_110424400
Isoform_196245_4	chr9	+	174	1	Intergenic	novelGene_11707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTTAAAAGAATATATAG	NA	False	NA	NA	False	NA	NA	NA	110437395	110437569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_110437400_110437600
Isoform_196246_6	chr9	+	1168	1	FSM	ENSMUSG00000019659.9	ENSMUST00000198077.2	1150	1	12	-30	-1	30	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGATTGGTCAGTCTCGG	8516	False	NA	NA	False	NA	NA	NA	110485604	110486772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_110485600_110486800
Isoform_196248_21	chr10	+	181	1	Intergenic	novelGene_755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20753686	20753867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_20753700_20753900
Isoform_196249_3	chr9	-	1503	1	Antisense	novelGene_ENSMUSG00000019659.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTTAAAAAAAAAAAAAAAAA	1713	False	NA	NA	False	NA	NA	NA	110531238	110529735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_110529700_110531200
Isoform_196251_32	chr9	+	176	1	Intergenic	novelGene_11708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	110566986	110567162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_110567000_110567200
Isoform_196252_18	chr9	-	206	1	Intergenic	novelGene_11709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTGGTGGTTGCACAT	NA	False	NA	NA	False	NA	NA	NA	110625782	110625576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110625600_110625800
Isoform_196254_15	chr9	-	196	1	Intergenic	novelGene_11710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAACTCCTTAGCAGA	2432	False	NA	NA	False	NA	NA	NA	110642909	110642713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110642700_110642900
Isoform_196255_18	chr9	-	4463	1	Antisense	novelGene_ENSMUSG00000033335.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21385685	21381222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_21381200_21385700
Isoform_196271_9	chr9	+	176	1	Intergenic	novelGene_11711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTGCACACATG	3051	False	NA	NA	False	NA	NA	NA	110772817	110772993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_110772800_110773000
Isoform_196273_7	chr9	-	170	1	Intergenic	novelGene_11712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTAAAAAAGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	110777654	110777484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110777500_110777700
Isoform_196274_4	chr9	-	191	1	Intergenic	novelGene_11713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTGGGACTGTAGCTC	NA	False	NA	NA	False	NA	NA	NA	110817843	110817652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_110817700_110817800
Isoform_196275_7	chr9	+	186	1	Intergenic	novelGene_11714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAGGAAAAAAAGAAAGA	471	False	NA	NA	False	NA	NA	NA	110844997	110845183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_110845000_110845200
Isoform_196278_9	chr9	+	7265	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-113	-3	-97	3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTGTCTTTCAGTGA	NA	False	NA	16	True	NA	NA	NA	111100899	111108164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_111100900_111108200
Isoform_196280_14	chr9	+	3841	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-72	3380	-56	-1828	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGTGTGAATATGGGG	NA	False	NA	NA	False	NA	NA	NA	111100940	111104781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_111100900_111104800
Isoform_196283_11	chr9	+	7215	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-69	3	-53	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTTGTGTTTGTCTTT	NA	False	NA	10	True	NA	NA	NA	111100943	111108158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_111100900_111108200
Isoform_196285_30	chr9	-	1673	1	Intergenic	novelGene_11715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111352325	111350652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_111350700_111352300
Isoform_196286_266	chr4	+	177	1	Intergenic	novelGene_7900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126993290	126993467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_126993300_126993500
Isoform_196291_63	chr9	-	173	1	Intergenic	novelGene_11716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGTTAAAAAAAAAAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	113564442	113564269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_113564300_113564400
Isoform_196293_16	chr9	-	177	1	Intergenic	novelGene_11717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGTTAATTAAGG	NA	False	NA	NA	False	NA	NA	NA	113598106	113597929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_113597900_113598100
Isoform_196294_44	chr9	+	173	1	Intergenic	novelGene_11125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	21423067	21423240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21423100_21423200
Isoform_196299_28	chr9	+	156	1	Intergenic	novelGene_11718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAACTGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	114212660	114212816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_114212700_114212800
Isoform_19630_5	chr11	+	4981	23	FSM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-679	21	-679	-7	multi-exon	FALSE	canonical	3	201	junction_2	46.1409984237141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188601	21271115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
Isoform_196300_4	chr9	+	170	1	Intergenic	novelGene_11719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTAAAAAATCTGAA	NA	False	NA	NA	False	NA	NA	NA	114221115	114221285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_114221100_114221300
Isoform_196306_5	chr9	-	3293	1	Antisense	novelGene_ENSMUSG00000045594.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-7	NA	114274300	114271007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_114271000_114274300
Isoform_196307_5	chr9	-	4523	1	Antisense	novelGene_ENSMUSG00000045594.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCGGCTGTGATGTGTG	NA	False	NA	NA	False	NA	NA	NA	114293963	114289440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_114289400_114294000
Isoform_19631_113	chr11	+	4687	23	FSM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-384	20	-384	-6	multi-exon	FALSE	canonical	3	201	junction_2	46.1409984237141	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAGACTTAAAAGGCAA	NA	False	NA	13	True	AATAAA	-9	NA	21188896	21271116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
Isoform_196310_42	chr19	-	174	1	Intergenic	novelGene_5800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	40964561	40964387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_40964400_40964600
Isoform_196311_5	chr9	+	297	1	Intergenic	novelGene_11720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAGTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	114323156	114323453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_114323200_114323500
Isoform_196314_3	chr9	+	320	1	Intergenic	novelGene_11721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACCTAACAATGTCAGG	2836	False	NA	NA	False	NA	NA	NA	114332893	114333213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_114332900_114333200
Isoform_196315_38	chr9	+	173	1	Intergenic	novelGene_11126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGCCAACAAA	NA	False	NA	NA	False	NA	NA	NA	21452656	21452829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21452700_21452800
Isoform_196336_21	chr9	-	3042	1	ISM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	54191	4	54191	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGGTGTCCGTGTGA	NA	False	NA	-7	True	AATAAA	-18	NA	114339246	114336204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_114336200_114339200
Isoform_196353_19	chr9	-	4794	1	ISM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	52440	3	52440	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGTGTCCGTGTGAT	NA	False	NA	-6	True	AATAAA	-19	NA	114340997	114336203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_114336200_114341000
Isoform_196367_5	chr9	+	1055	1	Antisense	novelGene_ENSMUSG00000079259.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114340455	114341510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_114340500_114341500
Isoform_196368_3	chr9	-	175	1	Intergenic	novelGene_11722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTAAATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	114343678	114343503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_114343500_114343700
Isoform_196371_4	chr9	-	392	1	ISM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	23	56822	23	-56822	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATGTGATCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	114393414	114393022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_114393000_114393400
Isoform_196373_168	chr9	+	177	1	Intergenic	novelGene_11723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAACAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	114475050	114475227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_114475000_114475200
Isoform_196375_75	chr9	-	167	1	Intergenic	novelGene_11724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATACCGTATGTCTCT	771	False	NA	NA	False	NA	NA	NA	114500462	114500295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_114500300_114500500
Isoform_196376_7	chr9	+	169	1	Intergenic	novelGene_11725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	114503175	114503344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_114503200_114503300
Isoform_196380_3	chr9	-	173	1	Intergenic	novelGene_11726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATCTCTAATTCA	NA	False	NA	NA	False	NA	NA	NA	114528143	114527970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_114528000_114528100
Isoform_196383_161	chr9	-	170	1	Intergenic	novelGene_11727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	114573948	114573778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_114573800_114573900
Isoform_196395_7	chr9	+	1169	1	Genic_Genomic	ENSMUSG00000052724.8	novel	NA	NA	NA	NA	990	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCCACCATTCTGCTTT	NA	False	NA	NA	False	AATAAA	-35	NA	114610157	114611326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_114610200_114611300
Isoform_196397_7	chr9	-	172	1	Intergenic	novelGene_11728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	114699292	114699120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_114699100_114699300
Isoform_196398_144	chr5	+	151	1	Intergenic	novelGene_8779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATATAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	114671765	114671916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_114671800_114671900
Isoform_196400_9	chr9	-	188	1	Intergenic	novelGene_11731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGCACTCATACACATA	7745	False	NA	NA	False	NA	NA	NA	114811336	114811148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_114811100_114811300
Isoform_196403_1923	chr9	-	343	1	FSM	ENSMUSG00000050621.8	ENSMUST00000053150.8	374	1	0	31	0	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	1923	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7274	False	NA	NA	False	AATAAA	-17	NA	114811807	114811464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_114811500_114811800
Isoform_196405_10	chr9	+	215	1	Intergenic	novelGene_11732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCTCTTGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	114825350	114825565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_114825400_114825600
Isoform_196408_3	chr9	+	1143	1	Antisense	novelGene_ENSMUSG00000032437.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	115071649	115072792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_115071600_115072800
Isoform_196410_42	chr9	-	182	1	Intergenic	novelGene_11733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	115106594	115106412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_115106400_115106600
Isoform_196421_9	chr9	-	464	1	FSM	ENSMUSG00000080848.4	ENSMUST00000117563.2	472	1	70	-62	70	62	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGGGTGGCTCATTTA	NA	False	NA	-1	True	AATAAA	-34	NA	115870062	115869598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_115869600_115870100
Isoform_196430_7	chr9	-	208	1	Intergenic	novelGene_11734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTTCAAGGTTAGCC	NA	False	NA	NA	False	NA	NA	NA	118191417	118191209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_118191200_118191400
Isoform_196431_6	chr9	+	184	1	Intergenic	novelGene_11735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGATGTGGAA	NA	False	NA	NA	False	NA	NA	NA	118196221	118196405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_118196200_118196400
Isoform_196433_7	chr9	-	178	1	Intergenic	novelGene_11736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	118378516	118378338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_118378300_118378500
Isoform_196435_4	chr9	+	238	1	Intergenic	novelGene_11127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAAGAGCAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	21520993	21521231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21521000_21521200
Isoform_196436_28	chr9	-	154	1	Intergenic	novelGene_11737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTAGACATAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	118874743	118874589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_118874600_118874700
Isoform_196437_55	chr9	+	182	1	Intergenic	novelGene_11738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAGGCAGGCAGA	1203	False	NA	NA	False	NA	NA	NA	118927871	118928053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_118927900_118928100
Isoform_196438_3	chr9	+	172	1	Intergenic	novelGene_11739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAAAAGAGAGACAA	NA	False	NA	NA	False	NA	NA	NA	118942373	118942545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_118942400_118942500
Isoform_196439_3	chr9	-	166	1	Intergenic	novelGene_11740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTTAAAAAAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	118944785	118944619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_118944600_118944800
Isoform_196440_8	chr9	+	193	1	Intergenic	novelGene_11741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAAAAAATCAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	119004331	119004524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_119004300_119004500
Isoform_19645_60	chr11	+	4658	23	FSM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	-382	-3	-382	3	multi-exon	FALSE	canonical	3	123	junction_2	56.2718460791631	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGCAACTTTTTTCA	NA	False	NA	22	True	AATAAA	-18	NA	21188898	21271125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
Isoform_196451_40	chr9	-	169	1	Intergenic	novelGene_11742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAACAAAACA	9782	False	NA	NA	False	NA	NA	NA	119147283	119147114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_119147100_119147300
Isoform_196453_4	chr9	+	1982	1	Antisense	novelGene_ENSMUSG00000036737.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAATAAGGAA	NA	False	NA	NA	False	NA	NA	NA	119150807	119152789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_119150800_119152800
Isoform_196455_4	chr9	+	373	1	Intergenic	novelGene_11743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAACAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	119154685	119155058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_119154700_119155100
Isoform_196457_5	chr9	-	1881	1	Intergenic	novelGene_11744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGGGGCTGGTGAGAT	7543	False	NA	NA	False	NA	NA	NA	119182874	119180993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_119181000_119182900
Isoform_196459_18	chr9	-	2085	1	Antisense	novelGene_ENSMUSG00000061393.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119265906	119263821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_119263800_119265900
Isoform_196461_3	chr9	+	5530	1	Antisense	novelGene_ENSMUSG00000097504.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAACCTCGTCTGTAT	NA	False	NA	1	True	NA	NA	NA	119265665	119271195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_119265700_119271200
Isoform_196463_4	chr9	+	3700	1	Antisense	novelGene_ENSMUSG00000097504.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTTTTAATTTGTG	NA	False	NA	18	True	NA	NA	NA	119267512	119271212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_119267500_119271200
Isoform_196466_5	chr9	-	2108	1	Intergenic	novelGene_11745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGTGACCTGTCACG	NA	False	NA	NA	False	NA	NA	NA	119297276	119295168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_119295200_119297300
Isoform_196468_18	chr17	+	169	1	Intergenic	novelGene_4842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTAAAAAAAAATAAG	5015	False	NA	NA	False	NA	NA	NA	29332120	29332289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29332100_29332300
Isoform_196469_7	chr9	+	167	1	Intergenic	novelGene_11746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAACCTTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	119817830	119817997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_119817800_119818000
Isoform_196475_3	chr9	-	1167	1	Antisense	novelGene_ENSMUSG00000032187.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGATCCATTAAGAGA	NA	False	NA	NA	False	NA	NA	NA	21544372	21543205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_21543200_21544400
Isoform_196479_18	chr9	-	177	1	Intergenic	novelGene_11748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	120289009	120288832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_120288800_120289000
Isoform_196482_4	chr9	-	165	1	Intergenic	novelGene_11749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTCTTAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	120337816	120337651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_120337700_120337800
Isoform_196483_4	chr9	+	166	1	Intergenic	novelGene_11750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAAAAAAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	120346290	120346456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_120346300_120346500
Isoform_196486_13	chr9	-	2073	1	Intergenic	novelGene_11751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	120400464	120398391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_120398400_120400500
Isoform_196492_253	chr9	-	177	1	Intergenic	novelGene_11752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120451258	120451081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_120451100_120451300
Isoform_196495_17	chr9	-	175	1	Intergenic	novelGene_11753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAGGATTTGAG	NA	False	NA	NA	False	NA	NA	NA	120528819	120528644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_120528600_120528800
Isoform_196497_35	chr2	+	177	1	Intergenic	novelGene_6429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	92141931	92142108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_92141900_92142100
Isoform_196498_14	chr9	-	173	1	Intergenic	novelGene_11754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAAAGTACCTTT	2654	False	NA	NA	False	NA	NA	NA	120740543	120740370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_120740400_120740500
Isoform_196510_9	chr9	-	188	1	Intergenic	novelGene_11755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATCA	NA	False	NA	NA	False	NA	NA	NA	120981698	120981510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_120981500_120981700
Isoform_196511_23	chr9	+	178	1	Intergenic	novelGene_11756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTTAACATGG	NA	False	NA	NA	False	NA	NA	NA	121041125	121041303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_121041100_121041300
Isoform_196512_5	chr9	+	168	1	Intergenic	novelGene_11757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGGTTGGTTGGT	NA	False	NA	NA	False	NA	NA	NA	121083428	121083596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_121083400_121083600
Isoform_196513_4	chr9	-	2216	1	Antisense	novelGene_ENSMUSG00000110863.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACAGTCTCTTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	121115001	121112785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_121112800_121115000
Isoform_196514_4	chr9	-	176	1	Intergenic	novelGene_11758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAAAAGATATTGCCT	NA	False	NA	NA	False	NA	NA	NA	121120922	121120746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_121120700_121120900
Isoform_196517_479	chr9	+	177	1	Intergenic	novelGene_11759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121198164	121198341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_121198200_121198300
Isoform_196518_11	chr9	-	178	1	Intergenic	novelGene_11760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121292848	121292670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_121292700_121292800
Isoform_196526_5	chr9	-	1484	1	Intergenic	novelGene_11128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTCCCTTAAGCTGT	8087	False	NA	NA	False	NA	NA	NA	21608374	21606890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21606900_21608400
Isoform_196528_3	chr9	-	690	1	Intergenic	novelGene_11761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTCTTTGTCTTGGTC	NA	False	NA	NA	False	NA	NA	NA	121426310	121425620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_121425600_121426300
Isoform_196530_28	chr9	+	170	1	Intergenic	novelGene_11129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21609765	21609935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21609800_21609900
Isoform_196531_15	chr9	-	256	1	Intergenic	novelGene_11762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCTAAACCTACGAGT	NA	False	NA	NA	False	NA	NA	NA	121547298	121547042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_121547000_121547300
Isoform_196533_18	chr9	-	172	1	Intergenic	novelGene_11763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAATAAAATTACAA	NA	False	NA	NA	False	NA	NA	NA	121721943	121721771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_121721800_121721900
Isoform_196534_4	chr9	-	152	1	Intergenic	novelGene_11764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122065188	122065036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_122065000_122065200
Isoform_196535_9	chr9	-	171	1	Intergenic	novelGene_11765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTAAAAAAAAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	122175939	122175768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_122175800_122175900
Isoform_196536_34	chr9	+	204	1	Intergenic	novelGene_11766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTTTGATTACAATTGAT	NA	False	NA	NA	False	NA	NA	NA	122382291	122382495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_122382300_122382500
Isoform_196538_34	chr9	-	177	1	Intergenic	novelGene_11767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTCTAAACATAG	NA	False	NA	NA	False	NA	NA	NA	122592998	122592821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_122592800_122593000
Isoform_196539_164	chr9	+	169	1	Intergenic	novelGene_11768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAGAACAAACA	NA	False	NA	NA	False	NA	NA	NA	122597554	122597723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_122597600_122597700
Isoform_196540_16	chr2	-	176	1	Intergenic	novelGene_6128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1240	False	NA	NA	False	NA	NA	NA	32016107	32015931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_32015900_32016100
Isoform_196559_11	chr9	-	284	1	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	10	-3896	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACATAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122695040	122694756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_122694800_122695000
Isoform_196562_14	chr9	+	2028	1	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	11	-12895	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	1900	False	NA	NA	False	NA	NA	NA	21634905	21636933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_21634900_21636900
Isoform_196564_6	chr9	-	854	1	FSM	ENSMUSG00000110945.2	ENSMUST00000217077.2	2578	1	-12	1736	-12	-1736	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCCAAAC	8749	False	NA	NA	False	NA	NA	NA	122850649	122849795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_122849800_122850600
Isoform_196565_5	chr2	+	170	1	Antisense	novelGene_ENSMUSG00000026942.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGAACTGGTGCTATGGG	NA	False	NA	NA	False	NA	NA	NA	25419685	25419855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr2_+_25419700_25419900
Isoform_196567_48	chr9	-	1754	1	FSM	ENSMUSG00000054871.6	ENSMUST00000068140.6	1712	1	-46	4	-46	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTGTATGTTTCCTTT	NA	False	NA	-1	True	AATACA	-15	NA	123089875	123088121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_123088100_123089900
Isoform_196569_3	chr9	-	172	1	Intergenic	novelGene_11769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTTTTAAAGTGGG	NA	False	NA	NA	False	NA	NA	NA	123163557	123163385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_123163400_123163600
Isoform_196573_9	chr9	+	224	1	Intergenic	novelGene_11770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTTCCCCCTAGAAGAG	NA	False	NA	NA	False	TTTAAA	-18	NA	123326671	123326895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_123326700_123326900
Isoform_196574_52	chr9	+	166	1	Intergenic	novelGene_11771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123343272	123343438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_123343300_123343400
Isoform_196585_3	chr9	-	1119	2	NNC	ENSMUSG00000025241.17	novel	1179	4	NA	NA	0	-12103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	9323	False	NA	NA	False	NA	NA	NA	123680951	123679812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr9_-_123680412_123680431
Isoform_196591_4	chr9	-	874	1	Genic_Genomic	ENSMUSG00000110834.2	novel	NA	NA	NA	NA	-47	-10955	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124044816	124043942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_124043900_124044800
Isoform_196592_4	chr9	-	211	1	Antisense	novelGene_ENSMUSG00000111733.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGAGGACACGGCTTC	NA	False	NA	NA	False	NA	NA	NA	124102200	124101989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_124102000_124102200
Isoform_196594_5	chr9	-	1245	1	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124196745	124195500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_124195500_124196700
Isoform_196606_4	chr9	+	263	1	Intergenic	novelGene_11130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTGAACACAAATTTCC	6574	False	NA	NA	False	NA	NA	NA	21702197	21702460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21702200_21702500
Isoform_196607_5	chr9	+	176	1	Intergenic	novelGene_11131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATAT	3119	False	NA	NA	False	NA	NA	NA	21738789	21738965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21738800_21739000
Isoform_19661_3	chr11	+	2662	18	FSM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	-186	316	-186	-316	multi-exon	FALSE	canonical	2	7	junction_1	3.74350648863466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTGTTTTCATAATGT	NA	False	NA	NA	False	AATAAA	-9	NA	21522048	21848673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
Isoform_196610_4	chr9	-	176	1	Intergenic	novelGene_11075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATTC	NA	False	NA	NA	False	NA	NA	NA	6278475	6278299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_6278300_6278500
Isoform_196611_19	chr9	-	179	1	Intergenic	novelGene_11132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGATGTTTCCCC	7906	False	NA	NA	False	NA	NA	NA	21802018	21801839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21801800_21802000
Isoform_196612_26	chr9	-	197	1	Intergenic	novelGene_11133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTATGGGTGTTTTG	5597	False	NA	NA	False	NA	NA	NA	21804327	21804130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21804100_21804300
Isoform_196614_3	chr9	+	185	1	Intergenic	novelGene_11134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATCTGTCATCCAG	NA	False	NA	NA	False	NA	NA	NA	21865778	21865963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21865800_21866000
Isoform_196616_18	chr9	-	187	1	Intergenic	novelGene_11135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGAAAGCACAGG	NA	False	NA	NA	False	NA	NA	NA	21876015	21875828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_21875800_21876000
Isoform_196617_10	chr9	+	190	1	Intergenic	novelGene_11136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTGCATCCCTG	NA	False	NA	NA	False	NA	NA	NA	21876596	21876786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_21876600_21876800
Isoform_196619_3	chr9	-	1284	1	Genic_Genomic	ENSMUSG00000038895.17	novel	NA	NA	NA	NA	6597	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	21975975	21974691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_21974700_21976000
Isoform_19662_10	chr11	+	2583	18	FSM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	-107	316	-107	-316	multi-exon	FALSE	canonical	2	7	junction_1	3.74350648863466	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTGTTTTCATAATGT	NA	False	NA	NA	False	AATAAA	-9	NA	21522127	21848673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
Isoform_196622_32	chr9	-	177	1	Intergenic	novelGene_11137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATACATACAGGCAA	788	False	NA	NA	False	NA	NA	NA	22035624	22035447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_22035400_22035600
Isoform_196625_7	chr9	+	1462	1	NIC	ENSMUSG00000010607.9	novel	695	2	NA	NA	45	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGTTTCTTCTAAGA	NA	False	NA	38	True	AATAAA	-38	NA	22068186	22069648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_22068200_22069600
Isoform_196628_17	chr9	+	175	1	Intergenic	novelGene_11076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	6837505	6837680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_6837500_6837700
Isoform_196633_4740	chr9	-	701	1	FSM	ENSMUSG00000061167.10	ENSMUST00000088480.4	615	1	-35	-51	-35	51	mono-exon	FALSE	NA	NA	NA	NA	NA	4740	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTGAC	NA	False	NA	NA	False	AATAAA	-17	NA	22097552	22096851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22096900_22097600
Isoform_196636_6	chr9	-	176	1	Antisense	novelGene_ENSMUSG00000074472.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATGAGC	4188	False	NA	NA	False	NA	NA	NA	22112960	22112784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_22112800_22113000
Isoform_196637_7	chr9	-	155	1	ISM	ENSMUSG00000090925.3	ENSMUST00000188595.2	2307	2	6920	5	1606	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTGTAGCTTTTA	NA	False	NA	NA	False	NA	NA	NA	22118236	22118081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_22118100_22118200
Isoform_196639_95	chr9	-	176	1	Intergenic	novelGene_11139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1712	False	NA	NA	False	NA	NA	NA	22134065	22133889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_22133900_22134100
Isoform_19664_43	chr11	+	1213	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	357	-2	357	2	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATCTGTGTAGTTCTT	NA	False	NA	9	True	ATTAAA	-18	NA	22462444	22469236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
Isoform_196642_3	chr9	-	178	1	Intergenic	novelGene_11140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAACCCATAAAACTA	NA	False	NA	NA	False	NA	NA	NA	22152684	22152506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_22152500_22152700
Isoform_196643_16	chr9	+	172	1	Intergenic	novelGene_11141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	22178417	22178589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_22178400_22178600
Isoform_196644_82	chr9	-	168	1	Intergenic	novelGene_11142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAAGAC	3726	False	NA	NA	False	NA	NA	NA	22182533	22182365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_22182400_22182500
Isoform_196645_4	chr9	-	2018	1	Genic_Genomic	ENSMUSG00000066829.8	novel	NA	NA	NA	NA	-43	-15121	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22218987	22216969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_22217000_22219000
Isoform_196646_27	chr9	-	195	1	Intergenic	novelGene_11143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCTATATCCTAT	NA	False	NA	NA	False	NA	NA	NA	22227190	22226995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_22227000_22227200
Isoform_196647_11	chr9	-	230	1	Intergenic	novelGene_11144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATAATTGGATCAAAG	8657	False	NA	NA	False	NA	NA	NA	22231434	22231204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_22231200_22231400
Isoform_196649_55	chr9	-	1068	1	FSM	ENSMUSG00000094627.3	ENSMUST00000178676.3	273	1	3	-798	3	798	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAACACTAAA	7421	False	NA	NA	False	AATAAA	-21	NA	22232670	22231602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_22231600_22232700
Isoform_19665_20	chr11	+	1394	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	171	3	171	-3	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGCTTATCTGTGTAG	NA	False	NA	4	True	ATTAAA	-13	NA	22462258	22469231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
Isoform_196651_10	chr9	+	158	1	Intergenic	novelGene_11145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAAATTTCCAC	NA	False	NA	NA	False	NA	NA	NA	22236765	22236923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_22236800_22236900
Isoform_196655_35	chr9	+	173	1	Intergenic	novelGene_11077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	6860893	6861066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_6860900_6861100
Isoform_196657_24	chr9	+	175	1	Intergenic	novelGene_11146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAACTGTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	22311026	22311201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_22311000_22311200
Isoform_196659_8	chr9	+	191	1	Intergenic	novelGene_11147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACTAAATTCTAAAATTA	NA	False	NA	NA	False	NA	NA	NA	22338255	22338446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_22338300_22338400
Isoform_196662_3	chr9	-	175	1	Intergenic	novelGene_11148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22475889	22475714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_22475700_22475900
Isoform_196663_23	chr9	+	181	1	Intergenic	novelGene_11149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATATATACCATTTTC	NA	False	NA	NA	False	NA	NA	NA	22653930	22654111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_22653900_22654100
Isoform_196664_16	chr9	+	177	1	Intergenic	novelGene_11150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGATAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	22770247	22770424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_22770200_22770400
Isoform_196667_6	chr9	-	3987	1	Genic_Genomic	ENSMUSG00000047193.17	novel	NA	NA	NA	NA	-41	-31026	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAACCACTTTGTGAAC	-8	True	NA	NA	False	AATAAA	-24	NA	7184487	7180500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_7180500_7184500
Isoform_196670_3	chr9	+	252	1	Intergenic	novelGene_11152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTCCCCTCTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	24777184	24777436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_24777200_24777400
Isoform_196676_8	chr9	-	1392	1	Intergenic	novelGene_11153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATTATATTGTATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25163705	25162313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_25162300_25163700
Isoform_196677_41	chr4	+	193	1	Intergenic	novelGene_7498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTTAATAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40691909	40692102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_40691900_40692100
Isoform_196678_3	chr9	-	8062	1	Genic_Genomic	ENSMUSG00000110866.2	novel	NA	NA	NA	NA	-3722	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGTTGTGTTCTATT	NA	False	NA	NA	False	NA	NA	NA	25774670	25766608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_25766600_25774700
Isoform_196680_4	chr9	-	171	1	Intergenic	novelGene_11155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACGAG	NA	False	NA	NA	False	NA	NA	NA	25800672	25800501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_25800500_25800700
Isoform_196683_11	chr9	-	4748	1	NIC	ENSMUSG00000031969.17	novel	2885	11	NA	NA	12	-3767	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	9260	False	NA	NA	False	NA	NA	NA	26910833	26906085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_-_26906100_26910800
Isoform_196686_5	chr9	+	4818	1	Antisense	novelGene_ENSMUSG00000031988.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTTGGCTGCCCTAT	NA	False	NA	NA	False	NA	NA	NA	26924219	26929037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_26924200_26929000
Isoform_196687_9	chr9	+	2937	1	NIC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	83	-18285	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26942027	26944964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_26942000_26945000
Isoform_196689_5	chr9	+	172	1	Intergenic	novelGene_11156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATCCTGCAAA	NA	False	NA	NA	False	NA	NA	NA	27027139	27027311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_27027100_27027300
Isoform_196690_50	chr9	-	198	1	Intergenic	novelGene_11157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCCTTTTCCATCCTC	NA	False	NA	NA	False	NA	NA	NA	27050647	27050449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_27050400_27050600
Isoform_196691_4	chr9	-	181	1	Intergenic	novelGene_11158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTATAGCTTCC	NA	False	NA	NA	False	NA	NA	NA	27056860	27056679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_27056700_27056900
Isoform_196693_3	chr9	+	4597	1	ISM	ENSMUSG00000034275.19	ENSMUST00000214357.2	16144	20	53740	6	26004	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTTTGTTTCCTATG	NA	False	NA	4	True	AATAAA	-9	NA	27264239	27268836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_27264200_27268800
Isoform_196694_3	chr9	+	4327	1	ISM	ENSMUSG00000034275.19	ENSMUST00000214357.2	16144	20	54012	4	26276	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTGTTTCCTATGTT	NA	False	NA	6	True	AATAAA	-11	NA	27264511	27268838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_27264500_27268800
Isoform_196696_4	chr9	+	3769	1	ISM	ENSMUSG00000034275.19	ENSMUST00000214357.2	16144	20	54569	5	26833	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTTGTTTCCTATGT	NA	False	NA	5	True	AATAAA	-10	NA	27265068	27268837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_27265100_27268800
Isoform_196697_9	chr9	+	3533	1	ISM	ENSMUSG00000034275.19	ENSMUST00000214357.2	16144	20	54805	5	27069	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTTGTTTCCTATGT	NA	False	NA	5	True	AATAAA	-10	NA	27265304	27268837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_27265300_27268800
Isoform_19670_7881	chr11	+	1934	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	107	443	0	186	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	7881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940625	22953337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
Isoform_196700_9	chr9	+	2349	1	ISM	ENSMUSG00000034275.19	ENSMUST00000214357.2	16144	20	55989	5	28253	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTTGTTTCCTATGT	NA	False	NA	5	True	AATAAA	-10	NA	27266488	27268837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_27266500_27268800
Isoform_196702_3	chr9	-	175	1	Intergenic	novelGene_11159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAAATA	3833	False	NA	NA	False	NA	NA	NA	27372120	27371945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_27371900_27372100
Isoform_196703_4	chr9	+	177	1	Intergenic	novelGene_11160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAAAAAAAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	28554713	28554890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_28554700_28554900
Isoform_196704_14	chr9	-	178	1	Intergenic	novelGene_11161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATCTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29754502	29754324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_29754300_29754500
Isoform_196706_6	chr9	+	2323	1	Genic_Genomic	ENSMUSG00000031993.8	novel	NA	NA	NA	NA	-69	-35312	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATTAAATAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	30338334	30340657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_+_30338300_30340700
Isoform_196707_8	chr9	+	175	1	Intergenic	novelGene_11162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	30469892	30470067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_30469900_30470100
Isoform_196709_7	chr9	+	176	1	Intergenic	novelGene_11163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTCAGA	NA	False	NA	NA	False	NA	NA	NA	30791544	30791720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_30791500_30791700
Isoform_19671_961	chr11	+	1966	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	75	443	-32	186	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940593	22953337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
Isoform_196711_8	chr9	+	180	1	Intergenic	novelGene_11164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAGGAACTTGGA	NA	False	NA	NA	False	NA	NA	NA	30857014	30857194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_30857000_30857200
Isoform_196714_3	chr9	+	5600	1	Intergenic	novelGene_11165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30913947	30919547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_30913900_30919500
Isoform_196715_9	chr9	-	2050	1	Intergenic	novelGene_11167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30955232	30953182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_30953200_30955200
Isoform_196723_29	chr9	-	1023	1	Antisense	novelGene_ENSMUSG00000047412.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30983003	30981980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_30982000_30983000
Isoform_196725_5	chr9	-	1271	1	Antisense	novelGene_ENSMUSG00000047412.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30983251	30981980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_30982000_30983300
Isoform_196766_21	chr9	+	173	1	Intergenic	novelGene_11168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31090687	31090860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_31090700_31090900
Isoform_196767_3	chr9	+	1273	1	Intergenic	novelGene_11169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31119637	31120910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_31119600_31120900
Isoform_196769_2363	chr9	+	652	1	FSM	ENSMUSG00000074516.7	ENSMUST00000213318.2	480	1	-51	-121	-51	121	mono-exon	FALSE	NA	NA	NA	NA	NA	2363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	-1	True	NA	NA	False	AATAAA	-18	NA	7751674	7752326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_7751700_7752300
Isoform_196779_37	chr9	-	205	1	Intergenic	novelGene_11078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTTTAAAACATTTTT	NA	False	NA	NA	False	NA	NA	NA	7753628	7753423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_7753400_7753600
Isoform_196780_8	chr9	-	174	1	Intergenic	novelGene_11170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAAGTTCTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	31269558	31269384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_31269400_31269600
Isoform_196781_46	chr9	-	167	1	Intergenic	novelGene_11171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9330	False	NA	NA	False	NA	NA	NA	31270837	31270670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_31270700_31270800
Isoform_196782_19	chr9	+	166	1	Intergenic	novelGene_11172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTTAAAAAAAAAAA	-4	True	NA	NA	False	NA	NA	NA	31281243	31281409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_31281200_31281400
Isoform_196787_17	chr9	-	154	1	Intergenic	novelGene_11174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATGTCTGCTATCCTC	NA	False	NA	-1	True	NA	NA	NA	31501701	31501547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_31501500_31501700
Isoform_196791_135	chr9	-	1622	1	FSM	ENSMUSG00000091639.3	ENSMUST00000169182.3	1355	1	-102	-165	-102	165	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTCTCAACAATGTTAAA	NA	False	NA	NA	False	AGTAAA	-27	NA	31848198	31846576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_-_31846600_31848200
Isoform_196796_4	chr9	-	178	1	Intergenic	novelGene_11175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	31897591	31897413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_31897400_31897600
Isoform_196798_7	chr9	-	177	1	Intergenic	novelGene_11176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCACCTACGTGAGATC	NA	False	NA	NA	False	NA	NA	NA	31937202	31937025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_31937000_31937200
Isoform_196799_33	chr9	-	175	1	Intergenic	novelGene_11177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32010177	32010002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_32010000_32010200
Isoform_196800_13	chr9	-	3134	1	Intergenic	novelGene_11178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	32047598	32044464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_32044500_32047600
Isoform_196801_17	chr9	+	155	1	Intergenic	novelGene_11179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAATCTA	9375	False	NA	NA	False	NA	NA	NA	32087610	32087765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_32087600_32087800
Isoform_196802_9	chr9	+	175	1	Intergenic	novelGene_11180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATAGTT	NA	False	NA	NA	False	NA	NA	NA	32106343	32106518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_32106300_32106500
Isoform_196804_4069	chr9	+	1985	1	FSM	ENSMUSG00000079884.7	ENSMUST00000182663.3	604	1	-88	-1293	-88	1293	mono-exon	FALSE	NA	NA	NA	NA	NA	4069	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAGTAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	33639454	33641439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_33639500_33641400
Isoform_196815_22	chr9	+	188	1	Intergenic	novelGene_11181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	35012660	35012848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_35012700_35012800
Isoform_196820_9	chr9	-	177	1	Intergenic	novelGene_11182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTATCCTTGTGTTT	7597	False	NA	NA	False	NA	NA	NA	35091516	35091339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_35091300_35091500
Isoform_196823_16	chr4	+	177	1	Intergenic	novelGene_7846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATATATTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	123163801	123163978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_123163800_123164000
Isoform_196824_35	chr10	-	178	1	Intergenic	novelGene_927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	1273	False	NA	NA	False	NA	NA	NA	62763128	62762950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62763000_62763100
Isoform_196825_6	chr9	+	1372	1	NIC	ENSMUSG00000032103.11	novel	2144	4	NA	NA	21	-5981	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-15	NA	35470782	35472154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr9_+_35470800_35472200
Isoform_196827_47	chr9	-	175	1	Intergenic	novelGene_11183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	35528258	35528083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_35528100_35528300
Isoform_196828_6	chr9	+	174	1	Intergenic	novelGene_11184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	35850880	35851054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_35850900_35851100
Isoform_196829_35	chr9	+	178	1	Intergenic	novelGene_11185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTTTTAATTAA	NA	False	NA	NA	False	NA	NA	NA	36391596	36391774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_36391600_36391800
Isoform_196830_27	chr9	-	178	1	Intergenic	novelGene_11186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	36403649	36403471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_36403500_36403600
Isoform_196831_4	chr9	-	3003	1	Intergenic	novelGene_11187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCCCTTCTCTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	36617489	36614486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_36614500_36617500
Isoform_196832_30	chr9	+	177	1	Intergenic	novelGene_11188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAATTGTCAA	NA	False	NA	NA	False	NA	NA	NA	36619196	36619373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_36619200_36619400
Isoform_196833_3	chr9	+	410	1	Antisense	novelGene_ENSMUSG00000032113.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36638012	36638422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_36638000_36638400
Isoform_196835_7	chr9	+	4857	2	Antisense	novelGene_ENSMUSG00000032116.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	36648543	36653434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_36651548_36651581
Isoform_196836_30	chr9	+	193	1	Intergenic	novelGene_11189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGTTTTAAGGGAT	NA	False	NA	NA	False	NA	NA	NA	36680558	36680751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_36680600_36680800
Isoform_196840_3	chr9	-	175	1	Intergenic	novelGene_11079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGCAGGA	NA	False	NA	NA	False	NA	NA	NA	7886558	7886383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_7886400_7886600
Isoform_196841_11	chr9	-	174	1	Intergenic	novelGene_11190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAACTATTAAAAAA	9336	False	NA	NA	False	NA	NA	NA	36720687	36720513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_36720500_36720700
Isoform_196842_63	chr9	-	214	1	Intergenic	novelGene_11191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAACAAAA	6724	False	NA	NA	False	NA	NA	NA	36724338	36724124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_36724100_36724300
Isoform_196844_94	chr9	+	172	1	Intergenic	novelGene_11192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	36814270	36814442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_36814300_36814400
Isoform_196846_321	chr9	+	440	1	FSM	ENSMUSG00000090136.5	ENSMUST00000160052.2	444	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAATGGGGCAAGCTCA	NA	False	NA	NA	False	AATAAA	-43	NA	37164221	37164661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr9_+_37164200_37164700
Isoform_196859_119	chr9	+	181	1	Intergenic	novelGene_11193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAATTACTTAA	NA	False	NA	NA	False	NA	NA	NA	37360194	37360375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_37360200_37360400
Isoform_196860_73	chr12	+	178	1	Intergenic	novelGene_2791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	102782734	102782912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_102782700_102782900
Isoform_196861_27	chr9	+	175	1	Intergenic	novelGene_11194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAACAAACAAACAAA	7331	False	NA	NA	False	NA	NA	NA	37393280	37393455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_37393300_37393500
Isoform_196863_5	chr9	+	280	1	Intergenic	novelGene_11196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37397367	37397647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_37397400_37397600
Isoform_196865_76	chr11	-	176	1	Intergenic	novelGene_1990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	7388	False	NA	NA	False	NA	NA	NA	88869701	88869525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_88869500_88869700
Isoform_196866_27	chr9	+	176	1	Intergenic	novelGene_11197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGACCCTCAT	NA	False	NA	NA	False	NA	NA	NA	39261761	39261937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_39261800_39261900
Isoform_196867_32	chr9	+	175	1	Intergenic	novelGene_11198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAAATATACT	NA	False	NA	NA	False	NA	NA	NA	39427904	39428079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_39427900_39428100
Isoform_196871_196	chr9	+	176	1	Intergenic	novelGene_11199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAACAAGGAA	2531	False	NA	NA	False	NA	NA	NA	40150691	40150867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_40150700_40150900
Isoform_196872_4	chr9	+	174	1	Intergenic	novelGene_11200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGCAGG	NA	False	NA	NA	False	NA	NA	NA	40241365	40241539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_40241400_40241500
Isoform_196873_46	chr9	+	176	1	Intergenic	novelGene_11201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	40678964	40679140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_40679000_40679100
Isoform_196874_9	chr9	+	180	1	Intergenic	novelGene_11202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	8223	False	NA	NA	False	NA	NA	NA	40704341	40704521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_40704300_40704500
Isoform_196875_3	chr9	-	463	1	Intergenic	novelGene_11203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAAATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-7	NA	40712071	40711608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_40711600_40712100
Isoform_196876_3	chr9	-	1133	1	Antisense	novelGene_ENSMUSG00000015656.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	NA	False	NA	NA	False	ATTAAA	-36	NA	40714796	40713663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_-_40713700_40714800
Isoform_196879_68	chr9	-	165	1	Intergenic	novelGene_11204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	40747224	40747059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_40747100_40747200
Isoform_196880_3	chr9	+	180	1	Intergenic	novelGene_11205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATGATCAGTCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	40756170	40756350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_40756200_40756400
Isoform_196882_5	chr9	-	3056	1	Genic_Genomic	ENSMUSG00000049313.9	novel	NA	NA	NA	NA	6814	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGCAGCAGCCGATTT	NA	False	NA	-9	True	AATAAA	-18	NA	41879069	41876013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr9_-_41876000_41879100
Isoform_196889_44	chr9	-	173	1	Intergenic	novelGene_11080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGTTTAGCTTGGA	4503	False	NA	NA	False	NA	NA	NA	8038330	8038157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_8038200_8038300
Isoform_196890_3	chr9	-	4168	1	ISM	ENSMUSG00000059495.15	ENSMUST00000165665.9	10752	41	137966	11	58640	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACTGAGTATGTGAC	NA	False	NA	-12	True	ATTAAA	-8	NA	42879316	42875148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_-_42875100_42879300
Isoform_196891_5	chr9	-	175	1	Intergenic	novelGene_11081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGGAGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	8046553	8046378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_8046400_8046600
Isoform_196893_11	chr9	+	246	1	Intergenic	novelGene_11206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATACTTTTTGCACT	NA	False	NA	NA	False	NA	NA	NA	42997466	42997712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_42997500_42997700
Isoform_196895_99	chr9	-	204	1	Intergenic	novelGene_11207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAGCAAATTC	NA	False	NA	NA	False	NA	NA	NA	43033409	43033205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_43033200_43033400
Isoform_196896_6	chr9	+	2115	1	Antisense	novelGene_ENSMUSG00000032015.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43055711	43057826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr9_+_43055700_43057800
Isoform_196917_4	chrM	+	305	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	650	0	650	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTGTAGCTTAATATTA	26	False	NA	-47	True	NA	NA	NA	719	1024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_700_1000
Isoform_196925_122	chrM	+	2612	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	0	-1030	0	1030	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATGTCTGATAAAAG	-3	True	NA	-19	True	NA	NA	NA	1093	3705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_1100_3700
Isoform_196993_7716	chrM	+	955	1	FSM	ENSMUSG00000064341.1	ENSMUST00000082392.1	957	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7716	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATGTCTGATAAAAGA	-1	True	NA	-18	True	NA	NA	NA	2751	3706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_2800_3700
Isoform_197_3	ERCC-00150	+	726	1	FSM	ERCC-00150A	DQ883659	727	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00150_+_0_700
Isoform_197016_45	chrM	+	1174	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	-137	1	-137	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTAGGATATACTAGT	337	False	NA	-28	True	NA	NA	NA	3776	4950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_3800_5000
Isoform_197017_110	chrM	+	1037	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTAGGATATACTAGT	-3	True	NA	-28	True	NA	NA	NA	3913	4950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_3900_5000
Isoform_197036_343	chrM	+	194	1	FSM	ENSMUSG00000064346.1	ENSMUST00000082397.1	67	1	-193	66	-193	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTAGGATATACTAGT	-1	True	NA	-28	True	NA	NA	NA	4756	4950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_4800_5000
Isoform_197038_10	chrM	+	568	1	FSM	ENSMUSG00000064346.1	ENSMUST00000082397.1	67	1	-193	-308	-193	308	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTTCATTAATCGTTG	-1	True	NA	NA	False	NA	NA	NA	4756	5324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_4800_5300
Isoform_197039_5	chrM	-	284	1	FSM	ENSMUSG00000064348.1	ENSMUST00000082399.1	71	1	-96	-117	-96	117	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAGTATATCCTAAACTT	9832	False	NA	46	True	NA	NA	NA	5255	4971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_-_5000_5300
Isoform_197040_105	chrM	+	307	1	Antisense	novelGene_ENSMUSG00000064347.1_AS_novelGene_ENSMUSG00000064350.1_AS_novelGene_ENSMUSG00000064348.1_AS_novelGene_ENSMUSG00000064349.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTTCATTAATCGTTG	0	True	NA	NA	False	NA	NA	NA	5017	5324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrM_+_5000_5300
Isoform_197043_5771	chrM	+	1614	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	-3	-66	-3	66	mono-exon	FALSE	NA	NA	NA	NA	NA	5771	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGATATTAGTAAAATC	-2	True	NA	NA	False	NA	NA	NA	5324	6938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_5300_6900
Isoform_197081_131	chr1	-	399	1	FSM	ENSMUSG00000101249.2	ENSMUST00000187117.2	492	1	163	-70	163	70	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATTAGTAAAATCAATT	NA	False	NA	NA	False	NA	NA	NA	24655115	24654716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24654700_24655100
Isoform_197086_2675	chr1	-	687	1	FSM	ENSMUSG00000102070.2	ENSMUST00000188231.2	681	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	2675	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTATGAAGCTAAGAGCGT	NA	False	NA	NA	False	ACTAAA	-38	NA	24654646	24653959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24654000_24654600
Isoform_197097_827	chrM	+	1625	1	FSM	ENSMUSG00000064358.1	ENSMUST00000082409.1	784	1	-841	0	-841	0	mono-exon	FALSE	NA	NA	NA	NA	NA	827	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCCTTAGTATAATTAAT	-11	True	NA	NA	False	NA	NA	NA	7765	9390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_7800_9400
Isoform_19713_5	chr11	+	2139	6	NIC	ENSMUSG00000049811.18	novel	1947	5	NA	NA	-15	9	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	6.81175454637056	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGGTTTGCTTTAGAGT	NA	False	NA	28	True	AATAAA	-39	NA	22958449	22973750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_22958627_22963538_22963648_22965654_22965885_22969999_22971134_22971493_22971662_22973429
Isoform_197132_6	chrM	-	5450	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	0	-4931	0	4931	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTGGGTCATTATGTA	-3	True	NA	NA	False	NA	NA	NA	14070	8620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_-_8600_14100
Isoform_197142_5	chrM	+	173	1	FSM	ENSMUSG00000064360.1	ENSMUST00000082411.1	348	1	172	3	172	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGGTAATTAGTTTAAA	170	False	NA	NA	False	AAAAAG	-18	NA	9630	9803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_9600_9800
Isoform_197144_2676	chrM	+	1668	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	-290	0	-290	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2676	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAATATAGTTTACAAAAA	-1	True	NA	13	True	NA	NA	NA	9876	11544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_9900_11500
Isoform_1972_1021	chr10	-	3255	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	27	0	27	0	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	1021	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	False	NA	-25	True	AATAAA	-17	NA	41179229	41064167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
Isoform_19721_1464	chr11	+	4039	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-45	2010	-8	6	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTTTTGTATAAGAAA	NA	False	NA	18	True	ATTAAA	-27	NA	23206032	23246239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
Isoform_197223_12379	chrM	+	1144	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12379	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTGATAGTATAAACATT	-2	True	NA	12	True	ACTAAA	-12	NA	14144	15288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_14100_15300
Isoform_19723_81	chr11	+	4127	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-133	2010	-96	6	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTTTTGTATAAGAAA	NA	False	NA	18	True	ATTAAA	-27	NA	23205944	23246239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
Isoform_19725_1135	chr11	+	4813	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-45	1236	-8	-584	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206032	23247013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
Isoform_197257_4	chrM	+	188	1	FSM	ENSMUSG00000064371.1	ENSMUST00000082422.1	67	1	1	-122	1	122	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCCCCAAGCATATAAG	540	False	NA	66	True	ATTAAA	-3	NA	15289	15477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_15300_15500
Isoform_197258_3	chrM	+	732	1	FSM	ENSMUSG00000064371.1	ENSMUST00000082422.1	67	1	13	-678	13	678	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATTCATGCTTGTTAG	552	False	NA	-6	True	NA	NA	NA	15301	16033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_15300_16000
Isoform_197262_10	chrM	+	694	1	Antisense	novelGene_ENSMUSG00000064372.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACATAAATGCTACTCAA	-1	True	NA	11	True	NA	NA	NA	15356	16050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrM_+_15400_16000
Isoform_197263_8	chrM	+	942	1	Antisense	novelGene_ENSMUSG00000064372.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	A	-1	True	NA	NA	False	AATAAA	-9	NA	15356	16298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrM_+_15400_16300
Isoform_197265_8	chrM	+	674	1	Intergenic	novelGene_11774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCCTCCTCTTAATGC	10	True	NA	57	True	CATAAA	-37	NA	15422	16096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrM_+_15400_16100
Isoform_197266_98	chrM	-	765	1	Intergenic	novelGene_11775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAGTAGTTTAATTAGA	1	True	NA	-5	True	CATAAA	-32	NA	16187	15422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrM_-_15400_16200
Isoform_197278_27	chr5	-	177	1	Intergenic	novelGene_9168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATGTTCAATCA	NA	False	NA	NA	False	NA	NA	NA	150349419	150349242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_150349200_150349400
Isoform_197280_5	chrUn_GL456368v1	+	2014	1	Intergenic	novelGene_11777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6242	8256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_GL456368v1_+_6200_8300
Isoform_197281_49	chr9	+	177	1	Intergenic	novelGene_11507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAATTGTG	211	False	NA	NA	False	NA	NA	NA	78230896	78231073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_78230900_78231100
Isoform_197282_130	chrUn_GL456382v1	-	544	1	Intergenic	novelGene_11779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	14749	14205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_GL456382v1_-_14200_14700
Isoform_197289_9	chrUn_JH584304v1	+	458	1	Intergenic	novelGene_11795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	59851	60309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_+_59900_60300
Isoform_197327_12	chrUn_JH584304v1	-	3838	5	Intergenic	novelGene_11783	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_3	137.066589656269	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGCCAACAATCTTCT	NA	False	NA	-44	True	AATAAA	-11	NA	59731	52197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985_57152_58563_58836_59591
Isoform_197339_12	chrUn_JH584304v1	-	2556	4	Intergenic	novelGene_11788	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_3	301.719884808557	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59037	53134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563
Isoform_197341_22	chrUn_JH584304v1	-	2496	5	Intergenic	novelGene_11787	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_3	261.431157286196	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTCCTGGGCTCTGT	NA	False	NA	-1	True	AGTAAA	-21	NA	59731	53132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563_58836_59591
Isoform_197347_15	chrUn_JH584304v1	-	3189	5	Intergenic	novelGene_11784	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	148.706716391695	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59038	52668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563
Isoform_197352_128	chrUn_JH584304v1	-	2653	6	Intergenic	novelGene_11791	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59724	53134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
Isoform_197353_21	chrUn_JH584304v1	-	3605	6	Intergenic	novelGene_11780	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCTTCTGTCTTCCCCA	NA	False	NA	-34	True	AATAAA	-21	NA	59729	52187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
Isoform_197356_20	chrUn_JH584304v1	-	2738	7	Intergenic	novelGene_11790	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	124	junction_4	312.424213032359	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59720	53134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
Isoform_197361_13	chrUn_JH584304v1	-	5341	4	Intergenic	novelGene_11789	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_3	95.6114823415868	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59716	53134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_58836_59591
Isoform_197365_24	chrUn_JH584304v1	-	2685	6	Intergenic	novelGene_11786	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	309.65464634008	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59719	52668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
Isoform_197369_17	chrUn_JH584304v1	-	2397	7	Intergenic	novelGene_11792	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	244.42818759073	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59731	53134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
Isoform_19737_42	chr11	+	4917	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-149	1236	-112	-584	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23205928	23247013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
Isoform_197375_11	chrUn_JH584304v1	-	2701	6	Intergenic	novelGene_11785	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	319.825327327277	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59688	52668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_58563_58836_59591
Isoform_197376_10	chrUn_JH584304v1	-	2277	6	Intergenic	novelGene_11793	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	319.825327327277	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTGTTGTCCTGGGCTC	NA	False	NA	-4	True	AGTAAA	-18	NA	59731	53135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_58563_58836_59591
Isoform_197384_14	chrUn_JH584304v1	-	3186	2	Intergenic	novelGene_11794	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGATCAACTCAGCC	NA	False	NA	-3	True	NA	NA	NA	59683	55741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_58836_59591
Isoform_197389_10	chrUn_JH584304v1	-	2492	6	Intergenic	novelGene_11782	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	296	junction_1	217.665431339016	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCAACAATCTTCTGTC	NA	False	NA	-41	True	AATAAA	-14	NA	59035	52194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_56985_57152_58563
Isoform_197390_85	chrUn_JH584304v1	-	2421	7	Intergenic	novelGene_11781	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	296	junction_1	199.023170063745	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59715	52189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
Isoform_197400_12	chrUn_MU069435v1	-	1134	1	Intergenic	novelGene_11815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	30816	29682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_29700_30800
Isoform_197402_192	chrUn_MU069435v1	+	491	1	Intergenic	novelGene_11796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCGGGCTTTCCCGTGG	NA	False	NA	27	True	NA	NA	NA	96	587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_+_100_600
Isoform_197404_10	chrUn_MU069435v1	+	1031	1	Intergenic	novelGene_11797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTTCGGAGGTCGACC	NA	False	NA	22	True	NA	NA	NA	131	1162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_+_100_1200
Isoform_197405_32	chrUn_MU069435v1	+	172	1	Intergenic	novelGene_11799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	5855	6027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_+_5900_6000
Isoform_197407_7	chrUn_MU069435v1	+	348	1	Intergenic	novelGene_11811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	-47	True	GATAAA	-41	NA	26124	26472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_+_26100_26500
Isoform_197408_53	chrUn_MU069435v1	-	371	1	Intergenic	novelGene_11813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AAGAAA	-1	NA	28002	27631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_27600_28000
Isoform_197411_7	chrUn_MU069435v1	-	587	1	Intergenic	novelGene_11807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAAGTAAGA	NA	False	NA	NA	False	NA	NA	NA	19356	18769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_18800_19400
Isoform_197412_43	chr10	-	178	1	Intergenic	novelGene_1126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	90978420	90978242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_90978200_90978400
Isoform_197415_3	chrUn_MU069435v1	+	760	1	Intergenic	novelGene_11814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	28049	28809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_+_28000_28800
Isoform_197417_6	chrUn_MU069435v1	+	554	1	Intergenic	novelGene_11810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	-47	True	GATAAA	-41	NA	25918	26472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_+_25900_26500
Isoform_197418_13	chrUn_MU069435v1	-	929	1	Intergenic	novelGene_11806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	15595	14666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_14700_15600
Isoform_197424_3	chrUn_MU069435v1	+	385	1	Intergenic	novelGene_11805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	GATAAA	-45	NA	13182	13567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_+_13200_13600
Isoform_197428_3	chrUn_MU069435v1	-	832	1	Intergenic	novelGene_11801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAGAAGGAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7936	7104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_7100_7900
Isoform_197429_5	chrUn_MU069435v1	-	807	1	Intergenic	novelGene_11809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAAGTAAGA	NA	False	NA	NA	False	NA	NA	NA	26343	25536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_25500_26300
Isoform_197432_10	chrUn_MU069435v1	-	424	1	Intergenic	novelGene_11800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	6762	6338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_6300_6800
Isoform_197434_6	chrUn_MU069435v1	-	525	2	Intergenic	novelGene_11812	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACAAACGAAC	NA	False	NA	NA	False	NA	NA	NA	27229	26669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_26852_26886
Isoform_197436_3	chrUn_MU069435v1	-	2189	1	Intergenic	novelGene_11808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACATGAAGGTAG	NA	False	NA	NA	False	NA	NA	NA	24757	22568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_22600_24800
Isoform_197439_7	chrUn_MU069435v1	-	326	1	Intergenic	novelGene_11798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-38	NA	1659	1333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_1300_1700
Isoform_197441_3	chrUn_MU069435v1	+	256	1	Intergenic	novelGene_11802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTCTCCAGCTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	7369	7625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_+_7400_7600
Isoform_197443_6	chrUn_MU069435v1	+	180	1	Intergenic	novelGene_11803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTCCAGCTATTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	7447	7627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_+_7400_7600
Isoform_197445_3	chrUn_MU069435v1	-	216	1	Intergenic	novelGene_11804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTCCTTTCCAGTAACT	NA	False	NA	NA	False	AATAAA	-24	NA	12924	12708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_MU069435v1_-_12700_12900
Isoform_197448_25	chrX	-	1809	2	FSM	ENSMUSG00000073294.5	ENSMUST00000101698.4	1838	2	29	0	29	0	multi-exon	FALSE	canonical	3	19	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTTGTGGTACAA	NA	False	NA	1	True	AATAAA	-24	NA	5995444	5993272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_5994830_5995192
Isoform_197449_8	chrX	-	1751	2	FSM	ENSMUSG00000073293.5	ENSMUST00000103006.4	1775	2	10	14	10	-14	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATTGGAAATGCTGG	NA	False	NA	-6	True	NA	NA	NA	6085059	6080763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_6081851_6084395
Isoform_197450_4	chrX	-	1852	2	FSM	ENSMUSG00000073293.5	ENSMUST00000103006.4	1775	2	-90	13	-90	-13	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATTGGAAATGCTGGA	NA	False	NA	-5	True	NA	NA	NA	6085159	6080762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_6081851_6084395
Isoform_197453_20	chrX	-	2734	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	-7	5663	-7	-4	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTTGTTCTTTAAAAT	NA	False	NA	NA	False	AGTAAA	-20	NA	7054960	7025711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
Isoform_197454_14	chrX	-	8375	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	15	0	15	0	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTCTGTTTCTGAAGA	NA	False	NA	0	True	AATAAA	-22	NA	7054938	7020048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
Isoform_197456_11	chrX	-	8721	14	NIC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	51	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_12	15.0816319177261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTCTGTTTCTGAAGA	3182	False	NA	0	True	AATAAA	-22	NA	7185546	7020048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7182897_7183063_7185344
Isoform_197457_3	chrX	-	8782	15	NNC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	17.5557421270835	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTCTGTTTCTGAAGA	3208	False	NA	0	True	AATAAA	-22	NA	7185520	7020048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7182897_7183063_7184640_7184728_7185344
Isoform_197458_60	chrX	-	503	2	FSM	ENSMUSG00000063018.7	ENSMUST00000128571.2	540	2	29	8	29	-5	multi-exon	FALSE	canonical	3	121	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAAGTTACTTTGTGG	NA	False	NA	-36	True	NA	NA	NA	7289198	7278349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7278772_7289117
Isoform_197459_10	chrX	-	651	3	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	15563	5	-6592	-5	3prime_fragment	FALSE	canonical	3	36	junction_1	10.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAAGTTACTTTGTGG	NA	False	NA	-36	True	NA	NA	NA	7295819	7278349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_7278772_7290368_7290524_7295745
Isoform_197460_10	chrX	-	727	3	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	15495	-3	-6660	0	3prime_fragment	FALSE	canonical	3	36	junction_1	10.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTGTGGCTTATTAT	NA	False	NA	-28	True	NA	NA	NA	7295887	7278341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_7278772_7290368_7290524_7295745
Isoform_197461_4	chrX	-	574	2	NIC	ENSMUSG00000063018.7	novel	885	4	NA	NA	-6658	4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGCTTATTATTCTT	NA	False	NA	-24	True	NA	NA	NA	7295885	7278337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_7278772_7295745
Isoform_197462_3	chrX	-	685	3	NNC	ENSMUSG00000063018.7	novel	885	4	NA	NA	-6641	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	25.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAAGTTACTTTGTGG	NA	False	NA	-36	True	NA	NA	NA	7295868	7278349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_7278772_7290383_7290524_7295745
Isoform_197463_7	chrX	-	3439	4	FSM	ENSMUSG00000039556.17	ENSMUST00000115742.9	3066	4	-22	-351	13	351	multi-exon	FALSE	canonical	2	7	junction_3	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAACACAATATATTT	NA	False	NA	NA	False	AATAAA	-17	NA	7440509	7424839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7427123_7430100_7430181_7430474_7430528_7439486
Isoform_197466_826	chrX	-	2215	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	137	1	137	0	multi-exon	FALSE	canonical	3	186	junction_12	25.3807721267498	826	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACGCTTAGGCATGGAT	NA	False	NA	-10	True	AATAAA	-18	NA	7471619	7460048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
Isoform_197473_2219	chrX	-	1105	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	49	3	-28	-3	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	2219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATAAGTTAACTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	7537580	7534182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
Isoform_197474_192	chrX	-	1153	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	1	3	1	-3	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATAAGTTAACTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	7537628	7534182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
Isoform_197482_3	chrX	-	3308	5	ISM	ENSMUSG00000031150.14	ENSMUST00000033490.13	3658	10	4062	2	2928	-2	3prime_fragment	FALSE	canonical	3	34	junction_4	2.48746859276655	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGATTGAGTCTCTGTC	1870	False	NA	-6	True	AATAAA	-12	NA	7603518	7597954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930
Isoform_197484_4	chrX	-	3887	11	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-1	-7	intron_retention	FALSE	canonical	0	0	junction_10	13.1057239403247	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAACTTGATTGAGTCT	NA	False	NA	-11	True	AATAAA	-7	NA	7617145	7597959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7606587_7606645_7616836
Isoform_197485_7	chrX	-	3899	11	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-1	1	intron_retention	TRUE	canonical	1	2	junction_10	12.7357763799464	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTGAGTCTCTGTCTGT	NA	False	NA	-3	True	AATAAA	-15	NA	7617145	7597951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7606587_7606649_7616836
Isoform_197486_43	chrX	-	3832	10	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	16	junction_9	8.46926177784867	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGATTGAGTCTCTGTC	NA	False	NA	-6	True	AATAAA	-12	NA	7617142	7597954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7616836
Isoform_197489_203	chrX	-	1132	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	79	-63	-4	-1	multi-exon	FALSE	canonical	3	349	junction_6	78.4950458450864	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	665	False	NA	-2	True	AATAAA	-21	NA	7765139	7760758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
Isoform_197490_23	chrX	-	1139	7	NIC	ENSMUSG00000031157.11	novel	1148	7	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	180.072824774373	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	649	False	NA	-2	True	AATAAA	-21	NA	7765155	7760758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765018
Isoform_197492_47	chrX	-	1017	7	FSM	ENSMUSG00000031157.11	ENSMUST00000156741.8	763	7	20	-274	-1	-1	multi-exon	FALSE	canonical	3	64	junction_6	182.287014226345	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	585	False	NA	-2	True	AATAAA	-21	NA	7765219	7760758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765204
Isoform_197493_132	chrX	-	1064	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	39	1	-31	-1	multi-exon	FALSE	canonical	3	139	junction_6	154.654902569847	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	335	False	NA	-2	True	AATAAA	-21	NA	7765469	7760758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
Isoform_197494_3	chrX	-	1118	2	FSM	ENSMUSG00000031160.5	ENSMUST00000033500.5	1077	2	-49	8	-49	-8	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACTAAATCTTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	7794895	7790522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7791453_7794707
Isoform_197496_4	chrX	-	1032	2	FSM	ENSMUSG00000031160.5	ENSMUST00000033500.5	1077	2	30	15	30	-15	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCCTTTATACTAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	7794816	7790529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7791453_7794707
Isoform_197512_16	chrX	-	3970	29	NIC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_27	82.0528932818238	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814034	7796360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813268_7813363_7813484_7813888
Isoform_197513_31	chrX	-	4399	28	ISM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	66	7	15	-5	intron_retention	FALSE	canonical	3	320	junction_26	43.7256065642336	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGAAGAAAGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	7814062	7796367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363
Isoform_197517_118	chrX	-	4041	29	FSM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	94	7	-28	-5	multi-exon	FALSE	canonical	3	77	junction_28	71.4613049995933	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGAAGAAAGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	7814034	7796367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
Isoform_197521_698	chrX	-	3997	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	63	9	12	-5	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGAAGAAAGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	7814065	7796367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
Isoform_197522_31	chrX	-	4066	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	1	2	1	0	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814127	7796360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
Isoform_197525_14	chrX	-	3866	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_28	82.8505770181771	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814130	7796364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7814087
Isoform_197530_68	chrX	-	2832	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	-44	-10	11	1	multi-exon	TRUE	canonical	3	73	junction_5	15.551205741035	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGGAGATTGAGGTCT	7311	False	NA	NA	False	NA	NA	NA	7940541	7927663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
Isoform_197531_34	chrX	-	2876	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	-95	-3	-40	3	multi-exon	FALSE	canonical	3	73	junction_5	15.551205741035	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGAGATTTGGGAGATT	7260	False	NA	NA	False	NA	NA	NA	7940592	7927670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
Isoform_197533_7	chrX	-	3100	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	-323	1	40	-1	multi-exon	FALSE	canonical	3	73	junction_5	15.551205741035	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTTGAGATTTGGGA	7032	False	NA	NA	False	NA	NA	NA	7940820	7927674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
Isoform_197534_135	chrX	-	2693	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	159	264	20	0	multi-exon	FALSE	canonical	3	87	junction_5	11.3947356265953	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGAGATTTGGGAG	7012	False	NA	NA	False	NA	NA	NA	7940840	7927673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
Isoform_197537_16	chrX	-	2761	5	FSM	ENSMUSG00000039231.19	ENSMUST00000150095.8	2807	5	36	10	36	-1	multi-exon	FALSE	canonical	3	87	junction_4	11.6054943884352	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTTGAGATTTGGGA	7028	False	NA	NA	False	NA	NA	NA	7940824	7927674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7929223_7929934_7930297_7936826_7937490_7938561_7938708_7940782
Isoform_197538_9	chrX	-	3671	3	FSM	ENSMUSG00000039231.19	ENSMUST00000127617.2	1166	3	11	-2516	11	-504	multi-exon	FALSE	canonical	3	73	junction_2	20	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGATTGTTTTGTTTT	7311	False	NA	NA	False	NA	NA	NA	7940541	7934151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7937490_7938561_7938708_7940354
Isoform_197539_8	chrX	-	3542	3	ISM	ENSMUSG00000039231.19	ENSMUST00000150095.8	2807	5	20	6487	20	-504	5prime_fragment	FALSE	canonical	3	87	junction_2	13	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGATTGTTTTGTTTT	7012	False	NA	NA	False	NA	NA	NA	7940840	7934151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_7937490_7938561_7938708_7940782
Isoform_197540_23	chrX	-	2349	12	FSM	ENSMUSG00000031165.7	ENSMUST00000033505.7	2114	12	43	-278	43	278	multi-exon	FALSE	canonical	2	6	junction_8	4.36552989219744	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTTGAAATTTTGTTA	7484	False	NA	NA	False	NA	NA	NA	7956694	7947413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7948229_7951744_7951860_7952080_7952536_7952802_7952957_7953168_7953212_7953999_7954175_7954962_7955017_7955112_7955155_7955274_7955378_7955494_7955582_7956082_7956224_7956529
Isoform_197542_6	chrX	-	4093	8	ISM	ENSMUSG00000031166.14	ENSMUST00000130832.8	4374	9	709	-19	450	-2	3prime_fragment	FALSE	canonical	3	33	junction_5	3.69776545872708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTGGGCCTCTCTTCA	7668	False	NA	-3	True	AATAAA	-42	NA	7998300	7989543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623
Isoform_197543_20	chrX	-	3939	9	FSM	ENSMUSG00000031166.14	ENSMUST00000033506.13	4183	9	242	2	-55	0	multi-exon	TRUE	canonical	3	18	junction_8	7.92839044194974	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGCCTCTCTTCATT	7163	False	NA	-1	True	AATAAA	-44	NA	7998805	7989541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525
Isoform_197545_4	chrX	-	3793	10	NIC	ENSMUSG00000031166.14	novel	1749	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	11.515957795625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGGGCCTCTCTTCAT	6905	False	NA	-2	True	AATAAA	-43	NA	7999063	7989542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525_7998606_7999008
Isoform_197552_42	chrX	-	1174	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	5	4	4	3	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6540	False	NA	-13	True	ATTAAA	-19	NA	8011957	8008603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_197553_103	chrX	-	1150	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	29	4	2	3	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6564	False	NA	-13	True	ATTAAA	-19	NA	8011933	8008603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_197558_36	chrX	-	1204	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	-49	-3	14	3	multi-exon	FALSE	canonical	3	391	junction_1	339.486213105759	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6513	False	NA	-13	True	ATTAAA	-19	NA	8011984	8008603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_197559_67	chrX	-	1153	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	2	-3	2	3	multi-exon	FALSE	canonical	3	391	junction_1	339.486213105759	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6564	False	NA	-13	True	ATTAAA	-19	NA	8011933	8008603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_197561_116	chrX	-	1170	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	162	6	4	3	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6540	False	NA	-13	True	ATTAAA	-19	NA	8011957	8008603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_197562_271	chrX	-	1146	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	186	6	2	3	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6564	False	NA	-13	True	ATTAAA	-19	NA	8011933	8008603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_197563_12	chrX	-	1089	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	132	117	11	-4	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTTTGTGAATGTCA	6510	False	NA	NA	False	ATTAAA	-34	NA	8011987	8008714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_197566_196	chrX	-	1149	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	79	-3	2	3	multi-exon	FALSE	canonical	3	529	junction_2	255.122192945524	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6564	False	NA	-13	True	ATTAAA	-19	NA	8011933	8008603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_197568_85	chrX	-	1173	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	55	-3	4	3	multi-exon	FALSE	canonical	3	529	junction_2	255.122192945524	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6540	False	NA	-13	True	ATTAAA	-19	NA	8011957	8008603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_197582_547	chrX	-	2393	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	257	-2	-33	2	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTTCTCTATTTCTT	NA	False	NA	-5	True	NA	NA	NA	8042163	8020708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
Isoform_197583_42	chrX	-	2433	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	202	13	-21	-2	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCACTGTGGTATGTGT	NA	False	NA	-20	True	NA	NA	NA	8042218	8020723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
Isoform_197584_7	chrX	-	2467	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	248	-67	25	67	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCAGTTGATGTAGA	NA	False	NA	60	True	TATAAA	-34	NA	8042172	8020643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
Isoform_197594_40	chrX	-	2539	5	FSM	ENSMUSG00000039201.11	ENSMUST00000133093.2	2560	5	34	-13	-33	2	multi-exon	FALSE	canonical	3	121	junction_3	12.051970793194	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTTCTCTATTTCTT	NA	False	NA	-5	True	NA	NA	NA	8042163	8020708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8022306_8022554_8023018_8038976_8039132_8040439_8040550_8041949
Isoform_197599_1043	chrX	-	1086	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	654	3	40	-1	multi-exon	FALSE	canonical	3	751	junction_2	18.0190871022924	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGAGAGATATTTAATT	NA	False	NA	-6	True	AATAAA	-16	NA	8059097	8051570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
Isoform_197601_16	chrX	-	1160	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	580	3	-34	-1	multi-exon	FALSE	canonical	3	751	junction_2	18.0190871022924	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGAGAGATATTTAATT	NA	False	NA	-6	True	AATAAA	-16	NA	8059171	8051570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
Isoform_197602_26	chrX	-	1207	4	NIC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	27	-1	intron_retention	FALSE	canonical	3	780	junction_2	7.25718035235908	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGAGAGATATTTAATT	NA	False	NA	-6	True	AATAAA	-16	NA	8059110	8051570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_8052073_8052882_8053159_8056317_8056676_8059039
Isoform_197603_3	chrX	-	1846	14	FSM	ENSMUSG00000031169.14	ENSMUST00000089403.10	1854	14	8	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_7	24.4748391512445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGTTTTTTGGTTT	1996	False	NA	-2	True	AATAAA	-17	NA	8072732	8060088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8067896_8067912_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
Isoform_197604_13	chrX	-	1848	14	FSM	ENSMUSG00000031169.14	ENSMUST00000082320.12	1883	14	35	0	1	0	multi-exon	FALSE	canonical	1	2	junction_7	23.6039812106789	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGGTTTTTTGGTTTTT	1999	False	NA	0	True	AATAAA	-19	NA	8072729	8060086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069264_8069283_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
Isoform_197605_99	chrX	-	1830	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	11	-2	1	0	multi-exon	TRUE	canonical	3	57	junction_2	6.61857655055493	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGGTTTTTTGGTTTTT	1999	False	NA	0	True	AATAAA	-19	NA	8072729	8060086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
Isoform_197607_183	chrX	-	1619	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	37	0	5	0	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118597	8106658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_197608_146	chrX	-	1666	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	-10	0	1	0	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118644	8106658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_197609_15	chrX	-	1955	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	-299	0	-288	0	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118933	8106658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_197610_5	chrX	-	1582	12	NIC	ENSMUSG00000031171.12	novel	3425	13	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	87.0699348438886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCACGTTGCTTACT	NA	False	NA	-15	True	AATAAA	-20	NA	8118645	8106659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_197611_67	chrX	-	1672	13	FSM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	1	1752	1	0	multi-exon	FALSE	canonical	3	43	junction_4	72.5114933418604	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118644	8106658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_197613_8	chrX	-	1037	5	FSM	ENSMUSG00000031171.12	ENSMUST00000147467.2	1047	5	10	0	10	0	multi-exon	FALSE	canonical	3	296	junction_2	13.7386316640341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGAAGTCAATGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	8118592	8114760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_197614_4	chrX	-	4740	14	NIC	ENSMUSG00000015340.11	novel	4752	13	NA	NA	-196	-245	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	1.59139698965978	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGAGCTTTCCCTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	9354206	9301735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_9304583_9306133_9306259_9308771_9308919_9310786_9310950_9312931_9313186_9315879_9315973_9316920_9317051_9319824_9320016_9321372_9321519_9323198_9323284_9331882_9331994_9333321_9333418_9335444_9335544_9353953
Isoform_197616_334	chrX	-	2084	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	90	2	90	-2	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGGCTCTGGTTGAT	NA	False	NA	-3	True	AATAAA	-19	NA	9529152	9520507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
Isoform_197618_16	chrX	-	2163	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	12	1	12	-1	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGCTCTGGTTGATC	NA	False	NA	-2	True	AATAAA	-20	NA	9529230	9520506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
Isoform_197621_46	chrX	-	2687	17	FSM	ENSMUSG00000031174.18	ENSMUST00000115533.8	2739	17	202	-150	15	-6	multi-exon	FALSE	canonical	3	37	junction_1	23.3939595569027	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGTGCTTGGAA	NA	False	NA	-6	True	AATAAA	-26	NA	10082957	10024460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_10025089_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
Isoform_197623_121	chrX	-	2706	17	FSM	ENSMUSG00000031174.18	ENSMUST00000073392.11	2926	17	214	6	27	-6	multi-exon	FALSE	canonical	3	77	junction_1	17.609368067878	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGTGCTTGGAA	NA	False	NA	-6	True	AATAAA	-26	NA	10082945	10024460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
Isoform_197625_6	chrX	-	2569	16	NIC	ENSMUSG00000031174.18	novel	2926	17	NA	NA	8	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	31.060085139756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGTGCTTGGAA	NA	False	NA	-6	True	AATAAA	-26	NA	10082964	10024460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
Isoform_197626_9	chrX	-	2088	13	NIC	ENSMUSG00000031174.18	novel	2926	17	NA	NA	15	-6	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	32.0350285711681	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGTGCTTGGAA	NA	False	NA	-6	True	AATAAA	-26	NA	10082957	10024460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
Isoform_197628_35	chrX	-	2281	7	ISM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	32831	3	32831	0	3prime_fragment	FALSE	canonical	3	150	junction_3	14.7129950119689	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAATTGAAGTACTTTGC	NA	False	NA	-9	True	AATAAA	-16	NA	11913961	11902981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661
Isoform_197635_20	chrX	-	6835	15	FSM	ENSMUSG00000040363.16	ENSMUST00000065143.14	6839	15	2	2	2	1	multi-exon	FALSE	canonical	3	70	junction_8	40.8733733995767	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	-8	True	AATAAA	-17	NA	11946790	11902980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
Isoform_197636_13	chrX	-	6868	15	FSM	ENSMUSG00000040363.16	ENSMUST00000065143.14	6839	15	-32	3	-32	0	multi-exon	FALSE	canonical	3	70	junction_8	40.8733733995767	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAATTGAAGTACTTTGC	NA	False	NA	-9	True	AATAAA	-16	NA	11946824	11902981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
Isoform_197638_5	chrX	-	6777	14	FSM	ENSMUSG00000040363.16	ENSMUST00000124033.8	6785	14	1	7	1	-4	multi-exon	FALSE	canonical	3	23	junction_10	49.0641410892762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGCAAATTGAAGTACT	NA	False	NA	-13	True	AATAAA	-12	NA	11946791	11902985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
Isoform_197639_7	chrX	-	6230	14	FSM	ENSMUSG00000040363.16	ENSMUST00000124033.8	6785	14	2	553	2	-550	multi-exon	FALSE	canonical	3	23	junction_10	49.0641410892762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCTGTGCTTGGCGTA	NA	False	NA	-10	True	NA	NA	NA	11946790	11903531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
Isoform_197641_8	chrX	-	6967	15	FSM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	-25	-1	-25	1	multi-exon	FALSE	canonical	3	55	junction_8	42.398077064597	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAGTACTTTGCATCC	NA	False	NA	-5	True	AATAAA	-20	NA	11946817	11902977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
Isoform_197643_7	chrX	-	6442	15	FSM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	-54	553	-54	-550	multi-exon	FALSE	canonical	3	55	junction_8	42.398077064597	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCTGTGCTTGGCGTA	NA	False	NA	-10	True	NA	NA	NA	11946846	11903531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
Isoform_197644_11	chrX	-	6937	15	FSM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	2	2	2	1	multi-exon	FALSE	canonical	3	55	junction_8	42.398077064597	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	-8	True	AATAAA	-17	NA	11946790	11902980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
Isoform_197646_7	chrX	-	6456	15	NIC	ENSMUSG00000040363.16	novel	6941	15	NA	NA	-189	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_14	49.9731050114939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCAAATTGAAGTACTTT	NA	False	NA	-11	True	AATAAA	-14	NA	12026783	11902983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_12026527
Isoform_197647_3	chrX	-	6337	14	FSM	ENSMUSG00000040363.16	ENSMUST00000115512.9	6887	14	0	550	0	-547	multi-exon	FALSE	canonical	3	23	junction_10	50.3691696818388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCTTGGCGTAATT	NA	False	NA	-7	True	NA	NA	NA	11946792	11903528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
Isoform_197649_472	chrX	-	2588	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	105	6	105	-6	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATTCTTACAGTTTTT	NA	False	NA	-9	True	AATAAA	-19	NA	12539802	12521123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
Isoform_197650_57	chrX	-	2620	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	75	4	75	-4	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTACAGTTTTTAA	NA	False	NA	-7	True	AATAAA	-21	NA	12539832	12521121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
Isoform_197655_7	chrX	-	3975	6	NIC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	95	-4	intron_retention	FALSE	canonical	3	210	junction_3	24.2520102259586	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTACAGTTTTTAA	NA	False	NA	-7	True	AATAAA	-21	NA	12539812	12521121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
Isoform_197658_18	chrX	-	6900	31	FSM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	58	5	58	-5	multi-exon	FALSE	canonical	3	55	junction_7	16.6631996393917	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTACCAACTCTCTTTGG	NA	False	NA	-8	True	AATAAA	-23	NA	12628254	12541612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_197662_3	chrX	-	6997	31	FSM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	-35	1	-35	-1	multi-exon	FALSE	canonical	3	55	junction_7	16.6631996393917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAACTCTCTTTGGTGAA	NA	False	NA	-4	True	AATAAA	-27	NA	12628347	12541608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_197663_7	chrX	-	6431	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	237	-163	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	19.1554750278713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTCTTTTGCCTCTT	NA	False	NA	0	True	ATTAAA	-42	NA	12628075	12541770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_197664_5	chrX	-	6584	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	246	-1	combination_of_known_junctions	TRUE	canonical	3	25	junction_7	19.1554750278713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAACTCTCTTTGGTGAA	NA	False	NA	-4	True	AATAAA	-27	NA	12628066	12541608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_197665_4	chrX	-	6762	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	63	-6	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	19.1554750278713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTACCAACTCTCTTTG	NA	False	NA	-9	True	AATAAA	-22	NA	12628249	12541613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_197667_8	chrX	-	4935	30	ISM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	245	4375	245	5	5prime_fragment	FALSE	canonical	3	55	junction_6	16.6138203002884	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGCTTTTTGGGCTTCT	NA	False	NA	1	True	AATAAA	-18	NA	12628067	12545982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_197670_3	chrX	-	3445	10	ISM	ENSMUSG00000064127.14	ENSMUST00000076016.6	2561	17	256	33564	256	-33564	5prime_fragment	FALSE	canonical	3	97	junction_8	6.20035841257942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGCATCTAGGTTGATT	NA	False	NA	NA	False	NA	NA	NA	12628056	12608931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_197671_29	chrX	-	4675	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-226	3917	-69	334	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTAAATGCCTTTGGG	NA	False	NA	NA	False	AATATA	-18	NA	13713043	13387235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
Isoform_197681_3	chrX	-	4570	25	FSM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	-222	3912	-28	339	multi-exon	FALSE	canonical	2	3	junction_8	34.3371508799952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCCTTTGGGTCCTT	NA	False	NA	NA	False	AATATA	-23	NA	13713002	13387230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
Isoform_197682_4	chrX	-	4421	25	FSM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	-78	3917	-41	334	multi-exon	FALSE	canonical	2	3	junction_8	34.3371508799952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTAAATGCCTTTGGG	NA	False	NA	NA	False	AATATA	-18	NA	13712858	13387235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
Isoform_197684_17	chrX	-	4624	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	-233	-334	-54	334	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTAAATGCCTTTGGG	NA	False	NA	NA	False	AATATA	-18	NA	13713028	13387235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
Isoform_197687_30	chrX	-	4474	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	-79	-338	-57	338	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAATGCCTTTGGGTCCT	NA	False	NA	NA	False	AATATA	-22	NA	13712874	13387231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
Isoform_197697_130	chrX	-	2276	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68062	-5	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_13	14.945265027612	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGACCATTTTA	NA	False	NA	-14	True	ATTAAA	-12	NA	17117545	16998292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
Isoform_197699_17	chrX	-	2125	13	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68062	-5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	30.7679486912382	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGACCATTTTA	NA	False	NA	-14	True	ATTAAA	-12	NA	17117545	16998292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17117502
Isoform_197700_6	chrX	-	2145	13	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68054	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	31.8576477823179	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGACCATTTTA	NA	False	NA	-14	True	ATTAAA	-12	NA	17117553	16998292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
Isoform_197701_4	chrX	-	2003	12	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68045	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	42.127708241167	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGACCATTTTA	NA	False	NA	-14	True	ATTAAA	-12	NA	17117562	16998292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17090177_17090292_17092576_17092829_17096739_17096964_17117502
Isoform_197703_3	chrX	-	2221	9	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68060	-71914	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_8	9.32402809948576	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTGCTTTGTAATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	17117547	17070201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
Isoform_197705_174	chrX	-	1848	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	134	1	62	-1	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTGTGCTTATATATC	NA	False	NA	-10	True	AATAAA	-20	NA	17438430	17422803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
Isoform_197706_48	chrX	-	1957	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	24	2	24	-2	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATTGTGCTTATATAT	NA	False	NA	-11	True	AATAAA	-19	NA	17438540	17422804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
Isoform_197710_28	chrX	-	2812	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	134	-963	62	963	multi-exon	TRUE	canonical	3	209	junction_3	21.435951110226	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTGGCGTCAGAAGTAT	NA	False	NA	NA	False	ACTAAA	-15	NA	17438430	17421839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
Isoform_197712_7	chrX	-	2013	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	-34	4	-34	-4	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGATTGTGCTTATAT	NA	False	NA	-13	True	AATAAA	-17	NA	17438598	17422806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
Isoform_197713_5	chrX	-	2919	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	26	-962	26	962	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTGGCGTCAGAAGTA	NA	False	NA	NA	False	ACTAAA	-14	NA	17438538	17421840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
Isoform_197714_3	chrX	-	2508	17	FSM	ENSMUSG00000037341.15	ENSMUST00000072451.11	2512	17	7	-3	7	2	multi-exon	TRUE	canonical	0	0	junction_11	2.05775970414429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTTTTTCACATAGTAG	NA	False	NA	NA	False	ATTAAA	-19	NA	20158039	19971990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_19972454_19974913_19975020_19986758_19986842_19998009_19998074_20005151_20005212_20025053_20025208_20025870_20025983_20028166_20028281_20028382_20028472_20028672_20028779_20031168_20031311_20032246_20032353_20052298_20052412_20055082_20055160_20068948_20069027_20071604_20071805_20157598
Isoform_197717_1069	chrX	-	559	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	344	5	344	-5	multi-exon	FALSE	canonical	3	2198	junction_1	70	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGACTGGTTACTGCT	NA	False	NA	-9	True	ATTAAA	-9	NA	20483514	20481569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20481782_20481952_20482084_20483298
Isoform_197719_98	chrX	-	851	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	52	5	52	-5	multi-exon	FALSE	canonical	3	2198	junction_1	70	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGACTGGTTACTGCT	NA	False	NA	-9	True	ATTAAA	-9	NA	20483806	20481569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20481782_20481952_20482084_20483298
Isoform_197724_15	chrX	-	3170	13	FSM	ENSMUSG00000037217.16	ENSMUST00000115345.8	3261	13	88	3	2	1	multi-exon	FALSE	canonical	3	14	junction_1	11.6198465279595	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTGTGCTTCTTGGTA	NA	False	NA	-1	True	AATAAA	-18	NA	20787155	20726752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20727811_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
Isoform_197725_4	chrX	-	3208	13	FSM	ENSMUSG00000037217.16	ENSMUST00000081893.7	3209	13	2	-1	2	1	multi-exon	FALSE	canonical	1	4	junction_1	14.1330483461833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTGTGCTTCTTGGTA	NA	False	NA	-1	True	AATAAA	-18	NA	20787155	20726752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20727849_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
Isoform_197726_3	chrX	-	3317	13	FSM	ENSMUSG00000037217.16	ENSMUST00000081893.7	3209	13	-107	-1	-21	1	multi-exon	FALSE	canonical	1	4	junction_1	14.1330483461833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTGTGCTTCTTGGTA	NA	False	NA	-1	True	AATAAA	-18	NA	20787264	20726752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20727849_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
Isoform_197727_34	chrX	-	4097	12	NIC	ENSMUSG00000037217.16	novel	3209	13	NA	NA	2	1	intron_retention	FALSE	canonical	3	43	junction_8	5.56405227203613	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTGTGCTTCTTGGTA	NA	False	NA	-1	True	AATAAA	-18	NA	20787155	20726752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
Isoform_197729_16	chrX	-	4208	12	NIC	ENSMUSG00000037217.16	novel	3209	13	NA	NA	-24	0	intron_retention	FALSE	canonical	3	43	junction_8	5.56405227203613	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCTGTGCTTCTTGGT	NA	False	NA	-2	True	AATAAA	-17	NA	20787267	20726753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
Isoform_197732_11	chrX	-	922	3	ISM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	3442	75	-499	-75	intron_retention	FALSE	canonical	3	117	junction_2	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAGATTCTGTAATGA	NA	False	NA	-2	True	AATAAA	-18	NA	20794352	20791767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_20791999_20793519_20793632_20793773
Isoform_197733_98	chrX	-	1510	9	FSM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	48	78	48	-78	multi-exon	FALSE	canonical	3	58	junction_8	23.4837044564949	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTAAGATTCTGTAA	NA	False	NA	-5	True	AATAAA	-15	NA	20797746	20791770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
Isoform_197734_12	chrX	-	1579	9	FSM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	-21	78	-21	-78	multi-exon	FALSE	canonical	3	58	junction_8	23.4837044564949	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTAAGATTCTGTAA	NA	False	NA	-5	True	AATAAA	-15	NA	20797815	20791770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
Isoform_197736_8	chrX	-	1334	8	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	50	-78	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	38.4819066946681	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTAAGATTCTGTAA	NA	False	NA	-5	True	AATAAA	-15	NA	20797744	20791770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_20791999_20793519_20793632_20793773_20793963_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
Isoform_197738_472	chrX	-	2770	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	17	761	17	-761	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTATTTTTTTTTC	NA	False	NA	-1	True	AATATA	-24	NA	20816830	20800394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
Isoform_197740_9	chrX	-	5083	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	8	-1543	8	1543	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20816839	20798090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
Isoform_197743_7	chrX	-	3037	10	NIC	ENSMUSG00000009406.14	novel	3548	6	NA	NA	-11383	-765	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	264.516516789256	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTGTTGGTATTTTTT	NA	False	NA	-5	True	AATATA	-20	NA	20828230	20800398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
Isoform_197744_9	chrX	-	627	7	FSM	ENSMUSG00000001134.10	ENSMUST00000001162.10	636	7	14	-5	0	-1	multi-exon	FALSE	canonical	3	21	junction_5	225.323039705713	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATAGTCCTTTTTTCC	NA	False	NA	-9	True	ATTAAA	-19	NA	20828225	20818162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827873_20828026_20828172
Isoform_197745_258	chrX	-	582	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	31	262	0	-1	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATAGTCCTTTTTTCC	NA	False	NA	-9	True	ATTAAA	-19	NA	20828225	20818162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
Isoform_197747_18	chrX	-	484	6	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	227.721760049408	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATAGTCCTTTTTTCC	NA	False	NA	-9	True	ATTAAA	-19	NA	20828235	20818162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_20818263_20818446_20818511_20825973_20826042_20826176_20826259_20827918_20828026_20828172
Isoform_197748_6	chrX	-	770	6	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	539	junction_4	46.7478341744299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATAGTCCTTTTTTCC	NA	False	NA	-9	True	ATTAAA	-19	NA	20828229	20818162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
Isoform_197749_40	chrX	-	3151	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	7	2	-2	-2	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATATTGTATTCCTTT	3243	False	NA	-7	True	NA	NA	NA	20928284	20895183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
Isoform_197751_10	chrX	-	5871	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	41	-2752	-8	2748	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGGTATCTCAAGATC	3277	False	NA	NA	False	AATAAA	-13	NA	20928250	20892429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
Isoform_197752_3	chrX	-	5459	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	-2	-2297	-2	2293	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTGTTTTAAATTGAG	3234	False	NA	NA	False	ATTAAA	-14	NA	20928293	20892884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
Isoform_197766_237	chrX	-	3287	9	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	366.28779668452	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732
Isoform_197768_85	chrX	-	3284	10	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	389.833899418461	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23231302	23085523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732_23227824_23231194
Isoform_197770_115	chrX	-	3376	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3724	0	at_least_one_novel_splicesite	TRUE	canonical	3	201	junction_6	415.817192405509	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23185142	23085523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23184851
Isoform_197772_1007	chrX	-	3221	8	ISM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	3387	14	3358	0	3prime_fragment	FALSE	canonical	3	772	junction_6	153.107671864193	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732
Isoform_197777_361	chrX	-	3218	9	FSM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	19	14	-10	0	multi-exon	FALSE	canonical	3	241	junction_8	283.721694623446	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23231302	23085523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732_23227824_23231194
Isoform_197782_371	chrX	-	3310	8	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3724	0	at_least_one_novel_splicesite	FALSE	canonical	3	222	junction_7	307.654590309938	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23185142	23085523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23184851
Isoform_197792_7	chrX	-	6163	7	FSM	ENSMUSG00000059708.13	ENSMUST00000051906.13	6003	7	-32	-128	-32	128	multi-exon	FALSE	canonical	3	11	junction_4	20.573040611441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAATAGTGACTATTGA	NA	False	NA	NA	False	AATAAA	-11	NA	35909080	35871838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35887220_35887990_35900125_35900228_35908702
Isoform_197794_8	chrX	-	5301	6	FSM	ENSMUSG00000059708.13	ENSMUST00000133980.2	1370	6	-238	-3693	61	128	multi-exon	FALSE	canonical	3	34	junction_4	11.6687617166519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAATAGTGACTATTGA	NA	False	NA	NA	False	AATAAA	-11	NA	35908987	35871838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35900125_35900228_35908702
Isoform_197795_21	chrX	-	5207	6	FSM	ENSMUSG00000059708.13	ENSMUST00000133980.2	1370	6	-272	-3565	27	0	multi-exon	FALSE	canonical	3	34	junction_4	11.6687617166519	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGATGTCTCTAT	NA	False	NA	NA	False	AATAAA	-16	NA	35909021	35871966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35900125_35900228_35908702
Isoform_197796_8	chrX	-	5389	6	FSM	ENSMUSG00000059708.13	ENSMUST00000133980.2	1370	6	-317	-3702	-18	137	multi-exon	FALSE	canonical	3	34	junction_4	11.6687617166519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTATTGACTGATCATT	NA	False	NA	NA	False	AATAAA	-20	NA	35909066	35871829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35900125_35900228_35908702
Isoform_197799_5	chrX	-	5267	5	NIC	ENSMUSG00000059708.13	novel	1370	6	NA	NA	-1	134	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	23.710493457539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGACTATTGACTGATC	NA	False	NA	NA	False	AATAAA	-17	NA	35909049	35871832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35908702
Isoform_197805_348	chrX	-	3311	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	27	2	19	-2	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGCTTGTTTTGATCAT	NA	False	NA	NA	False	AATAAA	-26	NA	36127872	36112197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
Isoform_197810_16	chrX	-	3830	3	FSM	ENSMUSG00000044149.8	ENSMUST00000239259.2	3882	3	46	6	46	-2	multi-exon	FALSE	canonical	3	10	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATTAGTGCTGTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	36167120	36151198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36154166_36155277_36155409_36166388
Isoform_197811_4	chrX	-	4935	3	FSM	ENSMUSG00000044149.8	ENSMUST00000239259.2	3882	3	46	-1099	46	1099	multi-exon	FALSE	canonical	3	10	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAGGCTTTGTGATAAA	NA	False	NA	NA	False	AATAAA	-14	NA	36167120	36150093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36154166_36155277_36155409_36166388
Isoform_197813_15	chrX	-	2377	10	FSM	ENSMUSG00000050379.16	ENSMUST00000060474.14	3457	10	162	918	-3	-918	multi-exon	TRUE	canonical	3	7	junction_1	15.297865581774	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCATGATCTGCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	36253147	36175896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36176908_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_197814_4	chrX	-	2347	10	NNC	ENSMUSG00000050379.16	novel	3457	10	NA	NA	-3	-921	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	19.5397663531528	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGCTCCATGATCTGC	NA	False	NA	NA	False	AATAAA	-15	NA	36253147	36175899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_36176908_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_197815_7	chrX	-	3245	10	FSM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	186	-1586	21	1	multi-exon	FALSE	canonical	3	5	junction_1	15.8869462681912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGTGTGTGGTGTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	36253123	36177097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36179001_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_197816_4	chrX	-	2125	11	FSM	ENSMUSG00000050379.16	ENSMUST00000053456.11	4673	11	162	2386	-3	-801	multi-exon	FALSE	canonical	2	7	junction_2	18.537529500988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	36253147	36179484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36180199_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_197818_5	chrX	-	2098	11	NNC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-3	-801	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	21.2388794431345	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	36253147	36179484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_36180199_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_197819_35	chrX	-	2080	10	NIC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-3	-801	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	11.2940495640649	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	36253147	36179484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_197821_10	chrX	-	2053	10	NNC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-3	-801	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	16.9538225414044	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	36253147	36179484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_197822_3	chrX	-	1537	4	ISM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	137	30639	-28	20926	5prime_fragment	FALSE	canonical	3	49	junction_3	5.24933858267454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTACTATAGTTTTTCT	NA	False	NA	NA	False	TTTAAA	-4	NA	36253172	36209322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_197826_4301	chrX	-	354	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	220	38	-16	-38	multi-exon	FALSE	canonical	3	12849	junction_1	35	4301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTTCTGGTTTATA	NA	False	NA	-8	True	AATAAA	-16	NA	36348835	36346210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36346403_36347637_36347742_36348777
Isoform_197836_91	chrX	-	2367	11	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	132	junction_3	55.9360348970143	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36373961	36355332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
Isoform_197837_7	chrX	-	2301	10	FSM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	41	2	41	-2	multi-exon	FALSE	canonical	3	68	junction_3	69.0213779729436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36373934	36355332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36356315_36359174_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
Isoform_197845_6	chrX	-	2522	8	FSM	ENSMUSG00000036572.17	ENSMUST00000133481.2	2553	8	1	30	1	-30	multi-exon	FALSE	canonical	3	159	junction_1	43.5576090496534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	36373974	36361132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
Isoform_197853_786	chrX	-	383	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	25	11	25	-11	multi-exon	FALSE	canonical	3	2951	junction_1	110	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAAAGTCATTTTT	2337	False	NA	-12	True	AATAAA	-9	NA	36454791	36451251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36451395_36453526_36453617_36454641
Isoform_197854_336	chrX	-	422	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	-7	4	-7	-4	multi-exon	FALSE	canonical	3	2951	junction_1	110	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCATTTTTATTTTTA	2305	False	NA	-5	True	AATAAA	-16	NA	36454823	36451244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36451395_36453526_36453617_36454641
Isoform_197857_10	chrX	-	837	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	-9	-11	-9	11	multi-exon	FALSE	canonical	3	60	junction_3	3.74165738677394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTTAGGTTGTGGCCT	NA	False	NA	NA	False	ATTAAA	-23	NA	36474703	36472989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
Isoform_197858_47	chrX	-	792	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	36	-11	36	11	multi-exon	FALSE	canonical	3	60	junction_3	3.74165738677394	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTTAGGTTGTGGCCT	NA	False	NA	NA	False	ATTAAA	-23	NA	36474658	36472989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
Isoform_197859_4	chrX	-	1166	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	36	-385	36	385	multi-exon	TRUE	canonical	3	60	junction_3	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTTGTCCTCTGACC	NA	False	NA	NA	False	NA	NA	NA	36474658	36472615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
Isoform_197860_4	chrX	-	743	3	ISM	ENSMUSG00000071773.5	ENSMUST00000115210.2	883	5	4166	-13	4166	13	3prime_fragment	FALSE	canonical	3	117	junction_2	2	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTTTATTCATGTGTC	NA	False	NA	-10	True	AATAAA	-14	NA	36481745	36477443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_36477701_36479202_36479249_36481305
Isoform_197861_35	chrX	-	823	4	ISM	ENSMUSG00000071773.5	ENSMUST00000115210.2	883	5	3923	-13	3923	13	3prime_fragment	FALSE	canonical	3	106	junction_3	6.34209919681348	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTTTATTCATGTGTC	NA	False	NA	-10	True	AATAAA	-14	NA	36481988	36477443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_36477701_36479202_36479249_36481305_36481649_36481811
Isoform_197864_5	chrX	-	750	3	NIC	ENSMUSG00000079629.6	novel	795	4	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTTGTTTTGTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36825121	36820766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_36820996_36824438_36824851_36825012
Isoform_197865_18	chrX	-	950	4	FSM	ENSMUSG00000079628.4	ENSMUST00000115166.3	979	4	23	6	23	-6	multi-exon	FALSE	canonical	3	17	junction_1	1.24721912892465	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTCATGTGTCTTTT	6391	False	NA	NA	False	AATAAA	-15	NA	36832957	36828158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36828390_36829677_36829724_36832090_36832497_36832690
Isoform_197866_10	chrX	-	805	4	FSM	ENSMUSG00000079627.3	ENSMUST00000115162.2	779	4	-23	-3	-23	3	multi-exon	FALSE	canonical	3	6	junction_3	11.2644968324772	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATTTGTTTTGTGCTTC	9206	False	NA	NA	False	AATAAA	-15	NA	36854953	36850646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36850876_36852672_36852719_36854261_36854674_36854835
Isoform_197868_8	chrX	-	1021	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	-141	2	-141	-2	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGGCTCCATTATC	937	False	NA	-3	True	AATAAA	-14	NA	36990788	36987975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
Isoform_197869_8	chrX	-	986	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	-104	0	-104	0	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGCTCCATTATCTT	974	False	NA	-1	True	AATAAA	-16	NA	36990751	36987973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
Isoform_197870_31	chrX	-	841	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	40	1	-26	-1	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTGGCTCCATTATCT	1118	False	NA	-2	True	AATAAA	-15	NA	36990607	36987974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
Isoform_197873_126	chrX	-	1732	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	35	2	-5	-2	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCTGTTTCAATTTGT	NA	False	NA	-3	True	AATAAA	-16	NA	37545296	37493940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
Isoform_197886_1127	chrX	-	3572	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	35	-3	-5	3	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTCACATTTTTTCC	NA	False	NA	-19	True	AATAAA	-22	NA	37545296	37508380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
Isoform_197931_28	chrX	-	5124	20	FSM	ENSMUSG00000031095.16	ENSMUST00000016681.15	3354	20	-119	-1651	18	1651	multi-exon	FALSE	non_canonical	3	1064	junction_17	109.947758937101	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	8173	False	NA	-27	True	AATAAA	-12	NA	37653521	37620499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539
Isoform_197955_120	chrX	-	5052	23	FSM	ENSMUSG00000031095.16	ENSMUST00000050083.6	3090	23	-11	-1951	2	1651	multi-exon	FALSE	non_canonical	3	112	junction_22	288.723912992818	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	NA	False	NA	-27	True	AATAAA	-12	NA	37665071	37620499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
Isoform_197957_684	chrX	-	4993	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	2	-1651	2	1651	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	NA	False	NA	-27	True	AATAAA	-12	NA	37665071	37620499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
Isoform_197967_25	chrX	-	4755	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-279	1651	at_least_one_novel_splicesite	FALSE	non_canonical	3	52	junction_20	294.224132252948	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	7876	False	NA	-27	True	AATAAA	-12	NA	37653818	37620499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653751
Isoform_197972_33	chrX	-	4814	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-231	1652	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_20	295.848609934203	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTTTCTGGGGAAG	7924	False	NA	-26	True	AATAAA	-13	NA	37653770	37620498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653645
Isoform_197979_58	chrX	-	1463	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	-20	6	-20	-6	multi-exon	FALSE	canonical	3	94	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGTTTCTATTACTT	NA	False	NA	-8	True	ATTAAA	-12	NA	37723984	37719667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_37721001_37723854
Isoform_197987_79	chrX	-	7604	39	FSM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	15	3	0	-3	multi-exon	FALSE	canonical	2	149	junction_20	23.0069843664894	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTGTATATTGTTA	NA	False	NA	-2	True	AATAAA	-23	NA	41000763	40883870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
Isoform_197992_19	chrX	-	7697	39	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	2	42	junction_7	32.9462859247091	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGTATATTGTTACT	NA	False	NA	0	True	AATAAA	-25	NA	41000773	40883868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
Isoform_197999_103	chrX	-	2772	23	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	15	32192	0	-3775	5prime_fragment	FALSE	canonical	3	149	junction_4	23.7647300993345	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTGATGTAGCGAT	NA	False	NA	NA	False	AATAAA	-43	NA	41000763	40916059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
Isoform_198_6	ERCC-00154	+	519	1	FSM	ERCC-00154A	DQ854997	521	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00154_+_0_500
Isoform_1980_6	chr10	-	1648	10	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	55.4917411272464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTACCTTGTTCCTT	NA	False	NA	0	True	AATAAA	-20	NA	41366378	41363167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364424_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
Isoform_198002_5	chrX	-	3522	21	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	0	37142	0	-8725	5prime_fragment	FALSE	canonical	3	149	junction_2	22.6773014267571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTGAAACATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	41000778	40921009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
Isoform_198011_22	chrX	-	3473	2	FSM	ENSMUSG00000045284.10	ENSMUST00000115056.2	3495	2	2	20	2	-20	multi-exon	FALSE	canonical	3	16	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTTGTTCTGTGTTC	NA	False	NA	-25	True	AATAAA	-20	NA	43879036	43875466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_43877171_43877267
Isoform_198012_10	chrX	-	3524	2	FSM	ENSMUSG00000045284.10	ENSMUST00000115056.2	3495	2	-29	0	7	0	multi-exon	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTCTGTTTTTCTTTA	NA	False	NA	-5	True	AATAAA	-40	NA	43879067	43875446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_43877171_43877267
Isoform_198017_37	chrX	-	3476	2	FSM	ENSMUSG00000045284.10	ENSMUST00000060481.9	3509	2	34	-1	-2	1	multi-exon	FALSE	canonical	3	37	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCTGTTTTTCTTTAA	NA	False	NA	-4	True	AATAAA	-41	NA	43879040	43875445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_43877171_43877289
Isoform_198023_15	chrX	-	3210	3	FSM	ENSMUSG00000037010.8	ENSMUST00000039026.8	3149	3	-61	0	-61	0	multi-exon	FALSE	canonical	2	8	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	47123791	47114022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47116585_47117170_47117343_47123315
Isoform_198025_6	chrX	-	3112	10	NIC	ENSMUSG00000036985.13	novel	2982	10	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	37.8235017409893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCCTCCTCCTTCC	NA	False	NA	-2	True	ATTAAA	-16	NA	47297337	47260845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47296999
Isoform_198026_129	chrX	-	2954	10	FSM	ENSMUSG00000036985.13	ENSMUST00000037960.11	2982	10	27	1	-2	-1	multi-exon	FALSE	canonical	3	96	junction_4	12.3107902084129	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCCTGCCTCCTCCTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	47297537	47260846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
Isoform_198033_67	chrX	-	6208	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-124	4	-124	-1	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47543170	47499926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
Isoform_198037_3	chrX	-	6531	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-447	4	-447	-1	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47543493	47499926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
Isoform_198038_4	chrX	-	6420	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-336	4	-336	-1	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47543382	47499926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
Isoform_198039_4	chrX	-	3027	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-156	3217	-156	2395	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGGTCTGTATCTTCA	NA	False	NA	NA	False	NA	NA	NA	47543202	47503139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
Isoform_198042_3	chrX	-	5867	9	FSM	ENSMUSG00000031103.13	ENSMUST00000033429.9	5847	9	-21	1	-21	-1	multi-exon	FALSE	canonical	1	1	junction_8	25.7718354022371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47552030	47499926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47551949
Isoform_198051_34	chrX	-	2093	16	FSM	ENSMUSG00000036932.15	ENSMUST00000114945.9	2221	16	128	0	-5	0	multi-exon	FALSE	canonical	3	21	junction_15	394.039704711199	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602308	47563820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47592459_47592591_47602112
Isoform_198054_339	chrX	-	2197	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	40	0	36	0	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602400	47563820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
Isoform_198055_2188	chrX	-	2065	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	172	0	35	0	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	2188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602268	47563820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
Isoform_198072_14	chrX	-	4066	21	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	26.1914108058348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTGCATCATCTAATA	NA	False	NA	42	True	AATAAA	-20	NA	47683267	47630503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682390_47682476_47683240
Isoform_198074_10	chrX	-	4021	20	FSM	ENSMUSG00000036916.14	ENSMUST00000072292.12	4045	20	62	-38	1	38	multi-exon	FALSE	canonical	3	45	junction_17	15.8598431908636	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAGACTGCCTGCTTTG	NA	False	NA	82	True	NA	NA	NA	47683267	47630463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
Isoform_198075_15	chrX	-	3987	20	FSM	ENSMUSG00000036916.14	ENSMUST00000072292.12	4045	20	8	50	8	-49	multi-exon	FALSE	canonical	3	45	junction_17	15.8598431908636	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTCTTGGGAATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	47683321	47630551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
Isoform_198079_5	chrX	-	4143	21	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	27.0766966227419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47683316	47630502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47682390_47682476_47683240
Isoform_198080_21	chrX	-	4009	20	NIC	ENSMUSG00000036916.14	novel	4024	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_17	17.5929663608489	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47683267	47630502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47683240
Isoform_198081_7	chrX	-	3938	20	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	28.9537791944314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAACCTACAGATTGCA	NA	False	NA	32	True	AATAAA	-10	NA	47683268	47630513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682390_47682476_47683240
Isoform_198082_8	chrX	-	3863	19	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	20.1286755711078	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47683267	47630502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
Isoform_198085_3	chrX	-	3933	19	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.556128285633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTGCATCATCTAATA	NA	False	NA	42	True	AATAAA	-20	NA	47683311	47630503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47683240
Isoform_198087_3	chrX	-	2236	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	-1	991	-1	-432	multi-exon	FALSE	canonical	3	25	junction_4	10.7695042700313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGTGAGTTTTGTCCTC	NA	False	NA	NA	False	AATAAA	-19	NA	48377120	48100325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
Isoform_198088_3	chrX	-	3868	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	-20	-622	-3	-129	multi-exon	TRUE	canonical	3	25	junction_4	10.7695042700313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCAGTCTCAGAGGCT	NA	False	NA	NA	False	AATAAA	-24	NA	48377139	48098712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
Isoform_198089_12	chrX	-	3165	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114914.8	3936	16	-39	810	8	-59	multi-exon	FALSE	canonical	2	12	junction_14	13.255774423079	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGACTGGGCTGTGA	NA	False	NA	-14	True	AGTAAA	-14	NA	48377128	48099393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
Isoform_198092_7	chrX	-	3120	15	NIC	ENSMUSG00000031109.17	novel	3226	16	NA	NA	0	-58	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	12.2975441384341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGACTGGGCTGTGAG	NA	False	NA	-13	True	AGTAAA	-15	NA	48377119	48099392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
Isoform_198093_7	chrX	-	3118	15	FSM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	-10	59	7	-59	multi-exon	FALSE	canonical	2	12	junction_13	14.647560220329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGACTGGGCTGTGA	NA	False	NA	-14	True	AGTAAA	-14	NA	48377129	48099393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
Isoform_198094_7	chrX	-	4400	20	FSM	ENSMUSG00000031111.17	ENSMUST00000033442.14	4421	20	14	7	0	-7	multi-exon	FALSE	canonical	0	0	junction_6	2.03569259008565	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACCATGGTAGTGGT	NA	False	NA	NA	False	AATAAA	-25	NA	48886612	48871419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879644_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883651_48883999_48884027_48884155_48884285_48886529
Isoform_198095_3	chrX	-	2652	14	NIC	ENSMUSG00000031111.17	novel	2515	13	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.88736063790543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACATTTGTTGTATTTGC	NA	False	NA	NA	False	AATAAA	-28	NA	48886621	48875221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_48875430_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879644_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883651_48883999_48884027_48884155_48884285_48886529
Isoform_198098_7	chrX	-	2874	3	ISM	ENSMUSG00000085396.8	ENSMUST00000204991.3	1754	5	51	4982	51	5	5prime_fragment	FALSE	canonical	3	87	junction_1	14	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAGATTGGAAAGGTAA	NA	False	NA	-4	True	AATAAA	-23	NA	49659025	49651996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_49653845_49656416_49656571_49658153
Isoform_1981_351	chr10	-	1612	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	-12	2	-12	-2	multi-exon	FALSE	canonical	3	150	junction_9	17.8020667408847	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGCTCTACCTTGTTCC	NA	False	NA	-2	True	AATAAA	-18	NA	41366348	41363169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
Isoform_198101_3	chrX	-	3212	3	NNC	ENSMUSG00000085396.8	novel	1145	7	NA	NA	-5	-12570	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAATCATAT	NA	False	NA	NA	False	TTTAAA	-34	NA	49724143	49716957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_49718030_49718054_49719873_49723821
Isoform_198115_53	chrX	-	3803	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-747	-374	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	34.5671648951558	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTCTTTAATTATT	NA	False	NA	-1	True	AATAAA	-21	NA	50107642	50093162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_50095628_50103847_50104161_50106502_50107328_50107442
Isoform_198119_5	chrX	-	1768	8	NNC	ENSMUSG00000036109.18	novel	2243	8	NA	NA	166	9	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	8.22638859936455	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTATAGTGTTTTCTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	50294543	50209319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50253294_50253542_50294438
Isoform_198121_8	chrX	-	6929	8	FSM	ENSMUSG00000055780.11	ENSMUST00000069509.4	4120	8	62	-2871	62	2871	multi-exon	FALSE	canonical	3	16	junction_1	4.17475405605784	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATACCATTGACTCA	NA	False	NA	NA	False	AATAAA	-7	NA	50889959	50839964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
Isoform_198123_12	chrX	-	1521	5	NIC	ENSMUSG00000031118.9	novel	1232	4	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	35.6195171219375	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTGTTGCTCCGTTTC	NA	False	NA	-3	True	CATAAA	-16	NA	51061672	51057572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_51058747_51059091_51059163_51059359_51059477_51059858_51059953_51061607
Isoform_198124_50	chrX	-	1444	4	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-12	50	combination_of_known_splicesites	FALSE	canonical	3	60	junction_2	10.4029910228848	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTATGTCTAATTTCTA	NA	False	NA	48	True	TATAAA	-11	NA	51061661	51057521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_51058747_51059091_51059163_51059858_51059953_51061607
Isoform_198125_17	chrX	-	2101	3	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-22	1	intron_retention	FALSE	canonical	3	81	junction_2	1	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGCTCCGTTTCAT	NA	False	NA	-1	True	CATAAA	-18	NA	51061671	51057570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_51058747_51059091_51059953_51061607
Isoform_198127_23	chrX	-	2888	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-239	2	-239	-2	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGCTGGAAAATTTCCA	NA	False	NA	-21	True	ATTAAA	-13	NA	51254368	51141899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_198130_121	chrX	-	2713	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-108	46	-108	-46	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTTTATTTATCATGT	NA	False	NA	-11	True	ATTAAA	-13	NA	51254237	51141943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_198132_202	chrX	-	2726	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-77	2	-77	-2	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGCTGGAAAATTTCCA	NA	False	NA	-21	True	ATTAAA	-13	NA	51254206	51141899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_198134_13	chrX	-	2873	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-268	46	-268	-46	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTTTATTTATCATGT	NA	False	NA	-11	True	ATTAAA	-13	NA	51254397	51141943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_198137_18	chrX	-	4399	10	NNC	ENSMUSG00000031119.5	novel	2651	9	NA	NA	-122	1648	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	86.829334520848	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGTGTGTATAAGTGTT	NA	False	NA	-13	True	AATAAA	-14	NA	51254251	51140249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_51141563_51141584_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_198140_18	chrX	-	4361	10	NNC	ENSMUSG00000031119.5	novel	2651	9	NA	NA	-70	1660	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	86.829334520848	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTTTGTTTTTTTTTT	NA	False	NA	-1	True	AATAAA	-26	NA	51254199	51140237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_51141636_51141655_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_198148_23	chrX	-	4862	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-76	-2135	-76	2135	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTGACTGGACAACTTT	NA	False	NA	-5	True	AATAAA	-23	NA	51254205	51139762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_198155_533	chrX	-	2261	8	FSM	ENSMUSG00000055653.14	ENSMUST00000069360.14	2216	8	-51	6	-22	-6	multi-exon	FALSE	canonical	3	233	junction_6	17.9398086582293	533	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATGGTGTTGGTCCTT	NA	False	NA	NA	False	AATAAA	-11	NA	51702849	51361308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_51361832_51403713_51403874_51454598_51454720_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
Isoform_198160_8	chrX	-	2806	10	NNC	ENSMUSG00000036022.16	novel	2038	10	NA	NA	-41	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.833271190576	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTCTGCCTCTCTTAT	NA	False	NA	-6	True	AATAAA	-31	NA	52357938	52332294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
Isoform_198161_3	chrX	-	3578	10	NNC	ENSMUSG00000036022.16	novel	2038	10	NA	NA	-29	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.833271190576	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGTCTGCCTCTCTTA	NA	False	NA	-7	True	AATAAA	-30	NA	52358711	52332295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
Isoform_198165_63	chrX	-	4367	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	-827	-4	-42	4	multi-exon	FALSE	canonical	3	73	junction_3	8.54034542626936	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAAAAGTCTGCCTCTCT	NA	False	NA	-9	True	AATAAA	-28	NA	52358724	52332297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
Isoform_198170_8	chrX	-	3411	9	NNC	ENSMUSG00000036022.16	novel	3536	9	NA	NA	2722	-8	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	24.9446261747896	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGATGGATCGTAAAA	NA	False	NA	-21	True	AATAAA	-16	NA	52355175	52332309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52355147
Isoform_198171_11	chrX	-	3558	9	FSM	ENSMUSG00000036022.16	ENSMUST00000071023.12	4334	9	760	16	-25	-6	multi-exon	TRUE	canonical	3	12	junction_3	25.3743842289818	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATGGATCGTAAAAGT	NA	False	NA	-19	True	AATAAA	-18	NA	52357922	52332307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52335168_52342912_52343010_52347833_52347899_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
Isoform_198173_8	chrX	-	4359	9	FSM	ENSMUSG00000036022.16	ENSMUST00000071023.12	4334	9	-42	17	-42	-7	multi-exon	FALSE	canonical	3	12	junction_3	25.3743842289818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATGGATCGTAAAAG	NA	False	NA	-20	True	AATAAA	-17	NA	52358724	52332308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52335168_52342912_52343010_52347833_52347899_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
Isoform_198174_125	chrX	-	2173	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	9	-409	9	-1	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTTCTCTCTCCGTT	NA	False	NA	-5	True	CATAAA	-17	NA	52459370	52433475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
Isoform_198176_17	chrX	-	2201	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	-19	-409	-19	-1	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTTCTCTCTCCGTT	NA	False	NA	-5	True	CATAAA	-17	NA	52459398	52433475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
Isoform_198178_6	chrX	-	2013	5	NIC	ENSMUSG00000023074.12	novel	1773	6	NA	NA	6	-2	intron_retention	FALSE	canonical	1	2	junction_1	40.4436336151934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTGTTCTCTCTCCGT	NA	False	NA	-6	True	CATAAA	-16	NA	52459373	52433476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_52434867_52444532_52444751_52446286_52446363_52446450_52446705_52459298
Isoform_19818_6	chr11	+	1865	14	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	43	-56650	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	6.44962271269372	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAAGAAGAGGAAGAGG	385	False	NA	NA	False	NA	NA	NA	23256958	23314002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790
Isoform_198182_956	chrX	-	1235	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-12	1	-12	-1	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGACTTTAGTATATT	NA	False	NA	-12	True	AGTAAA	-16	NA	52759810	52744868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
Isoform_198183_148	chrX	-	1314	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-90	0	-90	0	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759888	52744867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
Isoform_198184_41	chrX	-	2686	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-12	-1450	-12	1450	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAATGCTTGAATATTA	NA	False	NA	NA	False	NA	NA	NA	52759810	52743417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
Isoform_198189_17	chrX	-	890	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	3	152	junction_7	416.319245634542	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	-10	True	AGTAAA	-18	NA	52759810	52744866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52759728
Isoform_198190_94	chrX	-	3309	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1225	junction_3	142.325008917145	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759810	52744867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753054_52753476_52753824_52759728
Isoform_198199_3	chrX	-	979	8	NIC	ENSMUSG00000054626.12	novel	984	8	NA	NA	6	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	96.8662026946953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGAGTGGCAA	NA	False	NA	NA	False	AATAAA	-6	NA	52799657	52785721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799590
Isoform_19820_3	chr11	+	5834	40	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	114375	3	1236	-3	3prime_fragment	FALSE	canonical	3	59	junction_27	16.4767882076088	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23371290	23439741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
Isoform_198201_76	chrX	-	989	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	-8	3	2	-3	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGAGTGGCAAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	52799671	52785717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
Isoform_198203_41	chrX	-	1037	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	-8	3	2	-3	multi-exon	FALSE	canonical	3	95	junction_7	69.0238054173031	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGAGTGGCAAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	52799671	52785717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
Isoform_198205_19	chrX	-	1019	8	NNC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	canonical	3	47	junction_7	85.2532840949813	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGAGTGGCAAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	52799671	52785717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798218_52799598
Isoform_198207_8	chrX	-	952	8	FSM	ENSMUSG00000073177.9	ENSMUST00000101561.8	951	8	-3	2	-3	-2	multi-exon	FALSE	canonical	3	17	junction_1	4.42165358301205	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGATTTTTTGCAATGT	NA	False	NA	NA	False	AATAAA	-17	NA	55258244	55235188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_55235530_55239012_55239112_55241930_55242031_55242833_55242952_55246943_55246979_55247366_55247437_55248032_55248151_55258173
Isoform_198209_269	chrX	-	4107	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	128	-1	128	1	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGTTTGGTAGTGGG	NA	False	NA	-6	True	AATAAA	-15	NA	55643301	55630870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
Isoform_19821_3	chr11	+	4228	24	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	139999	3	-11023	-3	3prime_fragment	FALSE	canonical	3	59	junction_11	16.4718927697387	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23396914	23439741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
Isoform_198213_13	chrX	-	4262	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	-26	-2	-26	2	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTGGTAGTGGGT	NA	False	NA	-5	True	AATAAA	-16	NA	55643455	55630869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
Isoform_198215_5	chrX	-	4005	3	NIC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	127	2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	65	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTGGTAGTGGGT	NA	False	NA	-5	True	AATAAA	-16	NA	55643302	55630869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_55634664_55640749_55640803_55643144
Isoform_198216_9	chrX	-	2913	16	FSM	ENSMUSG00000067878.14	ENSMUST00000114766.8	2891	16	-26	4	-26	-4	multi-exon	FALSE	canonical	2	2	junction_7	2.18682926224756	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATCTCTGTTGTCTCT	NA	False	NA	NA	False	AGTAAA	-23	NA	55867712	55843221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_55843463_55844649_55845030_55846362_55846553_55847120_55847203_55849725_55849831_55850759_55850905_55853203_55853331_55854977_55855151_55855397_55855526_55856222_55856912_55858674_55858768_55860884_55860994_55862635_55862800_55864035_55864114_55864203_55864297_55867596
Isoform_198217_16	chrX	-	2375	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	-54	-182	1	182	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTTGGGTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	56438395	56428707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
Isoform_198219_75	chrX	-	2317	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	4	-182	4	182	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTTGGGTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	56438337	56428707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
Isoform_19822_3	chr11	+	4075	22	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	145078	8	-5944	-8	3prime_fragment	FALSE	canonical	3	59	junction_9	17.2046505340853	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATGGTTTTATTTT	393	False	NA	7	True	AATAAA	-14	NA	23401993	23439736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
Isoform_198220_3	chrX	-	2809	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	4	-674	4	674	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTTGTGTTATCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	56438337	56428215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
Isoform_198222_11	chrX	-	2050	9	NIC	ENSMUSG00000031134.17	novel	2108	9	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	19.0028780714922	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGAAGCTGCAAACCGA	NA	False	NA	-13	True	AATAAA	-18	NA	56438338	56431718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
Isoform_198223_5	chrX	-	2105	9	NIC	ENSMUSG00000031134.17	novel	2108	9	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	19.0028780714922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTGAAGCTGCAAACCG	NA	False	NA	-14	True	AATAAA	-17	NA	56438394	56431719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
Isoform_198224_73	chrX	-	2525	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-33	7	-33	-7	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGGAAAACTTCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	58179829	58107511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
Isoform_198225_35	chrX	-	2823	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-331	7	-331	-7	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGGAAAACTTCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	58180127	58107511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
Isoform_198226_3	chrX	-	4015	6	NNC	ENSMUSG00000031137.18	novel	2499	5	NA	NA	-311	1227	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.9127805284481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAGACTGCAAATACT	NA	False	NA	NA	False	AATAAA	-20	NA	58180107	58106277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_58108181_58108202_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
Isoform_198227_16	chrX	-	2558	6	NNC	ENSMUSG00000031137.18	novel	2499	5	NA	NA	-96	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.9127805284481	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGGAAAACTTCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	58179892	58107511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_58108173_58108202_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
Isoform_198228_17	chrX	-	2858	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-366	7	-366	-7	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGGAAAACTTCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	58180162	58107511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
Isoform_19823_3	chr11	+	3893	21	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	145698	7	-5324	-7	3prime_fragment	FALSE	canonical	3	59	junction_8	17.3352242558324	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATGGTTTTATTTTT	1013	False	NA	8	True	AATAAA	-15	NA	23402613	23439737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
Isoform_198237_18	chrX	-	4354	29	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-83	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	140.41445122296	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59224532	59101319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
Isoform_198250_309	chrX	-	4281	28	FSM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-55	1	-55	-1	multi-exon	FALSE	canonical	3	390	junction_27	54.2283947104	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59224504	59101316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
Isoform_198251_111	chrX	-	4314	28	FSM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-87	0	-87	0	multi-exon	FALSE	canonical	3	390	junction_27	54.2283947104	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224536	59101315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
Isoform_198259_201	chrX	-	3810	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223619	59101315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
Isoform_198262_15	chrX	-	4062	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	578	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223871	59101315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
Isoform_198263_15	chrX	-	4025	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	615	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223834	59101315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
Isoform_198266_13	chrX	-	4194	27	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-83	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_22	111.604357192624	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGTGTTCGTGTATTT	NA	False	NA	-1	True	AATAAA	-30	NA	59224532	59101314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
Isoform_198271_22	chrX	-	4392	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	138.734807956675	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224536	59101315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
Isoform_198272_15	chrX	-	3888	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	148.257910963514	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223619	59101315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
Isoform_198275_12	chrX	-	3284	16	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-83	-56486	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	177.057228664131	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	59224532	59157804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
Isoform_198276_80	chrX	-	3238	15	ISM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-86	56490	-86	-56487	5prime_fragment	FALSE	canonical	3	390	junction_14	50.407775963149	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTGTTCTACTTTGTT	NA	False	NA	-2	True	NA	NA	NA	59224535	59157805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
Isoform_19828_116	chr11	+	3392	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	167	0	-14	0	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616173	23682876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
Isoform_198280_21	chrX	-	2735	15	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-56487	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_14	93.2665972536004	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTGTTCTACTTTGTT	NA	False	NA	-2	True	NA	NA	NA	59223619	59157805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
Isoform_198288_67	chrX	-	6069	30	FSM	ENSMUSG00000062949.14	ENSMUST00000101527.3	6044	30	-20	-5	-20	2	multi-exon	FALSE	canonical	3	63	junction_14	11.609582331096	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTATTCGAGTGTCTTG	NA	False	NA	-5	True	AATAAA	-16	NA	59449192	59268647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
Isoform_198289_9	chrX	-	5875	29	NIC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-20	6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	19.8131578626375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCGAGTGTCTTGTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	59449192	59268643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
Isoform_19829_20	chr11	+	3087	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	131	341	-50	-341	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCATCAGCTAGTGC	NA	False	NA	3	True	AATAAA	-16	NA	23616137	23682535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
Isoform_198290_8	chrX	-	5971	29	FSM	ENSMUSG00000062949.14	ENSMUST00000033480.13	5939	29	-20	-12	-20	9	multi-exon	FALSE	canonical	3	14	junction_1	18.7130588474619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGAGTGTCTTGTTTTTAA	NA	False	NA	2	True	AATAAA	-23	NA	59449192	59268640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_59271154_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
Isoform_198292_25	chrX	-	4871	9	FSM	ENSMUSG00000035847.16	ENSMUST00000101509.9	4972	9	20	81	20	-81	multi-exon	TRUE	canonical	3	25	junction_4	5.15842757049084	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTTTTTCCTGTATAT	NA	False	NA	-19	True	AATAAA	-22	NA	69408670	69386755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69408400
Isoform_198295_79	chrX	-	2355	7	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	74.9288551449529	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510810_69513723_69513901_69520583
Isoform_198296_10	chrX	-	2154	6	NIC	ENSMUSG00000073139.10	novel	736	6	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	87.3375062616285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520762	69503358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510810_69520583
Isoform_198297_35	chrX	-	2505	7	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	79.6773005455269	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520783	69503358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510963_69513723_69513901_69520583
Isoform_198299_491	chrX	-	2510	7	FSM	ENSMUSG00000073139.10	ENSMUST00000114630.3	1307	7	3	-1206	3	0	multi-exon	FALSE	canonical	3	188	junction_5	21.8587638158144	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520783	69503358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
Isoform_1983_4	chr10	-	1854	9	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-7	1	intron_retention	FALSE	canonical	3	150	junction_8	17.8465682975747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTGGCTCTACCTTGT	NA	False	NA	-5	True	AATAAA	-15	NA	41366343	41363172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365348_41365459_41365557_41365978
Isoform_198304_9	chrX	-	2231	6	NIC	ENSMUSG00000073139.10	novel	2429	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	103.207364078345	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520746	69503358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510810_69513723_69513901_69520583
Isoform_198306_85	chrX	-	2404	6	FSM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	25	0	-13	0	multi-exon	FALSE	canonical	3	32	junction_3	81.8300678235085	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520761	69503358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510968_69513723_69513901_69520583
Isoform_198313_6	chrX	-	3610	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	-10	0	-10	0	multi-exon	FALSE	canonical	3	43	junction_4	6.51683479938452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGATGTGATCTGTCT	NA	False	NA	1	True	NA	NA	NA	70536465	70463665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
Isoform_198314_4	chrX	-	3316	9	FSM	ENSMUSG00000035776.15	ENSMUST00000080035.11	3327	9	5	6	5	-6	multi-exon	FALSE	canonical	1	4	junction_7	17.0399347123162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTATGTCCTGATGTGAT	NA	False	NA	-5	True	NA	NA	NA	70536246	70463671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70494216_70494280_70536127
Isoform_198315_6	chrX	-	3379	10	NNC	ENSMUSG00000035776.15	novel	3600	10	NA	NA	4	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.818702894417	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCCTTATGTCCTGAT	NA	False	NA	-10	True	NA	NA	NA	70536247	70463676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484750_70493544_70493614_70494216_70494280_70536127
Isoform_198317_5	chrX	-	1722	4	FSM	ENSMUSG00000043453.6	ENSMUST00000088481.5	1821	4	14	85	14	-85	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTTAATAATTGCCTTA	NA	False	NA	NA	False	AATAAA	-28	NA	71430450	71425560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_71427050_71427946_71428036_71428780_71428874_71430399
Isoform_198319_197	chrX	-	1063	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	51	172	51	0	multi-exon	FALSE	canonical	3	590	junction_4	36.4862987983161	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCATTCTTTAAAGGAT	NA	False	NA	-13	True	AATAAA	-17	NA	71961966	71957309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
Isoform_19832_17	chr11	+	3580	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	-21	0	-21	0	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23615985	23682876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
Isoform_198321_34	chrX	-	1237	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	50	-1	50	1	multi-exon	TRUE	canonical	3	590	junction_4	36.4862987983161	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGTGGATTTTTACAG	NA	False	NA	-1	True	CATAAA	-18	NA	71961967	71957136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
Isoform_198323_21	chrX	-	1133	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	-20	173	-20	-1	multi-exon	FALSE	canonical	3	590	junction_4	36.4862987983161	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTCATTCTTTAAAGGA	NA	False	NA	-14	True	AATAAA	-16	NA	71962037	71957310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
Isoform_198336_332	chrX	-	2607	5	NNC	ENSMUSG00000050424.10	novel	2287	2	NA	NA	-2595	-2	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_1	20.9568008054665	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTCTGGCGATGT	NA	False	NA	-2	True	AATAAA	-19	NA	72083304	72077588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72077934_72078769_72080775_72080892_72080952_72081548_72081672_72083229
Isoform_198338_22	chrX	-	1200	9	FSM	ENSMUSG00000079845.9	ENSMUST00000078775.13	1162	9	-36	-2	-36	2	multi-exon	FALSE	canonical	3	52	junction_8	89.7743699504486	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72126120	72117948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125988
Isoform_198339_43	chrX	-	1220	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_8	86.1506674379253	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72126116	72117948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125964
Isoform_198340_11	chrX	-	1160	9	NIC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	103.290548938419	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72126118	72117950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125988
Isoform_198341_11	chrX	-	1178	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-26	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	100.580502583751	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72126110	72117948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125964
Isoform_198346_583	chrX	-	1606	9	FSM	ENSMUSG00000057836.13	ENSMUST00000114524.9	1584	9	-22	0	-16	0	multi-exon	FALSE	non_canonical	0	0	junction_7	496.010190797528	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140645	72129898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
Isoform_198350_70	chrX	-	1601	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	46	-2	10	0	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140655	72129898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
Isoform_198351_420	chrX	-	1566	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	79	0	1	0	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140622	72129900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
Isoform_198359_27	chrX	-	2407	8	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	-17	0	intron_retention	FALSE	canonical	3	586	junction_6	364.100344993643	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140646	72129898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
Isoform_19836_31	chr11	+	3156	18	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.8721180155863	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616399	23682876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
Isoform_198364_21	chrX	-	3761	7	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	586	junction_5	385.386674508718	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140624	72129900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138566_72138689_72140586
Isoform_19837_12	chr11	+	3389	18	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.8721180155863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616166	23682876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
Isoform_198371_75	chrX	-	1169	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	9	472	9	302	multi-exon	FALSE	canonical	3	269	junction_2	77.2438306598009	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGCATGCTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	72161299	72151712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
Isoform_198373_4	chrX	-	1655	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	11	-16	11	16	multi-exon	TRUE	canonical	3	269	junction_2	77.2438306598009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGGTATTTGGGGTTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	72161297	72151224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
Isoform_198374_37	chrX	-	1118	9	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-17	302	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	115.823141038395	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGCATGCTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	72161325	72151712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
Isoform_198375_16	chrX	-	1149	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	5	301	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_8	132.269551957357	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGCATGCTTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	72161303	72151713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161230
Isoform_198377_79	chrX	-	1049	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	31	303	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	76.0110088696878	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161277	72151711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
Isoform_198378_4	chrX	-	1556	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	9	14	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	76.0110088696878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGAGGTATTTGGGGTT	NA	False	NA	NA	False	ATTAAA	-28	NA	72161299	72151226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
Isoform_198381_3	chrX	-	1327	8	NNC	ENSMUSG00000058328.14	novel	1474	8	NA	NA	-721	303	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_7	148.375695242771	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72162029	72151711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161681
Isoform_198383_40	chrX	-	2826	5	FSM	ENSMUSG00000071745.2	ENSMUST00000080324.4	2862	5	42	-6	42	6	multi-exon	FALSE	canonical	3	17	junction_4	17.5499287747842	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAGATGTCTAAGACAGC	NA	False	NA	NA	False	AATAAA	-22	NA	72193014	72180831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192967
Isoform_198385_11	chrX	-	2812	5	NNC	ENSMUSG00000071745.2	novel	2862	5	NA	NA	678	8	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	17.5499287747842	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGTCTAAGACAGCTC	NA	False	NA	NA	False	AATAAA	-24	NA	72192378	72180829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192347
Isoform_198386_11	chrX	-	3459	5	NNC	ENSMUSG00000071745.2	novel	2862	5	NA	NA	42	19	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	17.5499287747842	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCTCTACTGATCCTG	NA	False	NA	NA	False	AATAAA	-35	NA	72193014	72180818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192347
Isoform_198388_11	chrX	+	2979	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	23.412817002659	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGTAGATGTCTAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	72160673	72172868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72160742_72161226_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_198389_3	chrX	-	1172	9	FSM	ENSMUSG00000031362.18	ENSMUST00000114531.8	1104	9	-66	-2	-25	2	multi-exon	FALSE	canonical	3	19	junction_7	121.935433734415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72286699	72277682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285789_72286183_72286267_72286581
Isoform_198390_22	chrX	-	1200	9	FSM	ENSMUSG00000031362.18	ENSMUST00000114530.8	1220	9	23	-3	23	3	multi-exon	FALSE	canonical	3	63	junction_1	102.200477004758	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72286713	72277681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286183_72286267_72286581
Isoform_198391_3	chrX	-	1580	9	FSM	ENSMUSG00000031362.18	ENSMUST00000114530.8	1220	9	34	-394	-28	3	multi-exon	FALSE	canonical	3	63	junction_1	102.200477004758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTTTGAATGTCTCCTA	NA	False	NA	NA	False	NA	NA	NA	72286702	72277290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286183_72286267_72286581
Isoform_198392_24	chrX	-	1222	9	NNC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	110.415125775412	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72286713	72277683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286183_72286267_72286557
Isoform_198394_5	chrX	-	1573	8	NIC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	30	1	intron_retention	FALSE	canonical	3	63	junction_1	109.115553802529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72286706	72277683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72286267_72286581
Isoform_198398_494	chrX	-	1603	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	-18	-1	-18	1	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72309014	72298144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
Isoform_198399_104	chrX	-	1651	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	-65	-2	-65	2	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-6	True	AATAAA	-18	NA	72309061	72298143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
Isoform_1984_5	chr10	-	2377	7	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	5	1	intron_retention	FALSE	canonical	3	152	junction_5	17.2473830543136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTGGCTCTACCTTGT	NA	False	NA	-5	True	AATAAA	-15	NA	41366321	41363172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364512_41364729_41364820_41364926_41365348_41365459
Isoform_198404_143	chrX	-	2408	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-8	True	AATAAA	-16	NA	72309005	72298145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
Isoform_198407_28	chrX	-	3787	7	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-8	1	intron_retention	FALSE	canonical	3	944	junction_2	356.51012920003	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72309004	72298144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72305146_72306028_72306099_72306921_72307059_72308956
Isoform_198412_14	chrX	-	1175	9	FSM	ENSMUSG00000067764.12	ENSMUST00000114503.9	1656	9	8	473	8	-473	multi-exon	TRUE	canonical	3	126	junction_7	127.059963698248	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336574	72326974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
Isoform_198414_11	chrX	-	1054	8	NIC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	31	-472	combination_of_known_splicesites	FALSE	canonical	3	126	junction_6	133.486986295309	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCATGCTTTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	72336551	72326973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
Isoform_198415_7	chrX	-	1024	8	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	-17	-473	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_7	157.992508218147	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336599	72326974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336558
Isoform_198417_587	chrX	-	1364	10	FSM	ENSMUSG00000031371.15	ENSMUST00000033737.15	1380	10	15	1	15	-1	multi-exon	FALSE	canonical	3	498	junction_3	42.8281089190294	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCCTTCGGACTAC	NA	False	NA	-13	True	AATAAA	-16	NA	72502635	72480921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
Isoform_198419_12	chrX	-	1016	7	FSM	ENSMUSG00000031371.15	ENSMUST00000077243.5	1032	7	12	4	12	-2	multi-exon	FALSE	canonical	3	30	junction_3	203.601462557506	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGACGTTGCCTTCGGAC	NA	False	NA	-16	True	AATAAA	-13	NA	72502638	72480924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72496604_72496667_72498472_72498541_72501579_72501696_72502440
Isoform_198420_37	chrX	-	2165	9	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	35	0	intron_retention	FALSE	canonical	3	498	junction_5	41.9545885452354	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502615	72480922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
Isoform_198422_7	chrX	-	2113	8	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	25	0	intron_retention	FALSE	canonical	2	4	junction_5	199.394696263364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502625	72480922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72491957_72492416_72492509_72498472_72498541_72501579_72501696_72502440
Isoform_198423_12	chrX	-	1638	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	-146	0	-42	0	multi-exon	FALSE	canonical	3	9	junction_11	19.8644164606543	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703476	72699599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
Isoform_198424_4	chrX	-	1823	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	-331	0	62	0	multi-exon	FALSE	canonical	3	9	junction_11	19.8644164606543	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703661	72699599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
Isoform_198425_37	chrX	-	1473	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114472.8	1532	12	59	0	59	0	multi-exon	FALSE	canonical	3	38	junction_11	13.5176652099123	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTGGTGCTGAACTGG	NA	False	NA	-3	True	AATAAA	-14	NA	72703664	72699600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
Isoform_198426_18	chrX	-	1530	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114472.8	1532	12	4	-2	4	1	multi-exon	FALSE	canonical	3	38	junction_11	13.5176652099123	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCTGAACTGGGT	NA	False	NA	-1	True	AATAAA	-16	NA	72703719	72699598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
Isoform_198428_10	chrX	-	1408	11	NIC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	57	2	combination_of_known_splicesites	TRUE	canonical	2	5	junction_10	21.6148097377701	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGCTGAACTGGGTG	NA	False	NA	0	True	AATAAA	-17	NA	72703666	72699597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72703624
Isoform_19843_3	chr11	+	1255	14	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	0	-17	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	67.663367939726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAACAAAAGCAAA	NA	False	NA	-14	True	NA	NA	NA	26337201	26421404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420806_26420949_26421324
Isoform_198433_1322	chrX	-	1191	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	25	3	25	-3	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	1322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTTTGTGTCTAACT	NA	False	NA	-16	True	AATAAA	-14	NA	72759756	72729786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
Isoform_19844_137	chr11	+	1185	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1067	472	0	-17	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAACAAAAGCAAA	NA	False	NA	-14	True	NA	NA	NA	26337201	26421404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
Isoform_198448_39	chrX	-	1288	13	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	11	-4	combination_of_known_junctions	FALSE	canonical	2	205	junction_10	516.424862771816	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830217	72822572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830133
Isoform_198449_379	chrX	-	1298	13	FSM	ENSMUSG00000002010.18	ENSMUST00000052761.9	1331	13	32	1	32	-1	multi-exon	TRUE	canonical	2	205	junction_10	445.162891535222	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830471	72822569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830380
Isoform_19845_72	chr11	+	1658	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1067	-1	0	1	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTAGTCATTAACACCCC	NA	False	NA	14	True	AATAAA	-16	NA	26337201	26421877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
Isoform_198452_102	chrX	-	1264	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	24	-3	combination_of_known_junctions	FALSE	canonical	3	210	junction_11	355.941284971423	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGCCCTGTTCTTCC	NA	False	NA	-31	True	AATAAA	-16	NA	72830204	72822571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830133
Isoform_198453_768	chrX	-	1286	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	3	1072	junction_10	144.485579365652	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830471	72822569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
Isoform_198454_660	chrX	-	1317	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	1072	junction_10	144.485579365652	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830502	72822569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
Isoform_198456_29	chrX	-	1370	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-52	-1	combination_of_known_junctions	FALSE	canonical	3	1072	junction_10	144.485579365652	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830555	72822569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
Isoform_198463_37	chrX	-	2045	10	FSM	ENSMUSG00000002010.18	ENSMUST00000156299.8	2080	10	32	3	32	-3	multi-exon	FALSE	canonical	3	1120	junction_7	119.009596044257	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGCCCTGTTCTTCC	NA	False	NA	-31	True	AATAAA	-16	NA	72830471	72822571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
Isoform_198464_31	chrX	-	2090	10	FSM	ENSMUSG00000002010.18	ENSMUST00000156299.8	2080	10	-11	1	-11	-1	multi-exon	FALSE	canonical	3	1120	junction_7	119.009596044257	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830514	72822569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
Isoform_198475_57	chrX	-	2346	9	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1120	junction_6	124.053415914275	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830502	72822569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
Isoform_198478_3	chrX	-	5239	27	NIC	ENSMUSG00000031391.19	novel	5113	29	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	1.70276489393682	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACCATTCCTTCATTT	NA	False	NA	NA	False	AATAAA	-13	NA	72924418	72897385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72898873_72899364_72899438_72899748_72899887_72900237_72900400_72900508_72900629_72900773_72900948_72901026_72901150_72901243_72901446_72901647_72901764_72902908_72903132_72903307_72903379_72903624_72903823_72904044_72904156_72904325_72904451_72904653_72904811_72904911_72905079_72905187_72905300_72905883_72906028_72906165_72906298_72906453_72906639_72906762_72906875_72907764_72907936_72908029_72908153_72909222_72909423_72909660_72909767_72913334_72913523_72924299
Isoform_198479_49	chrX	-	3175	22	FSM	ENSMUSG00000031389.18	ENSMUST00000064376.13	3353	22	-2	180	-2	0	multi-exon	FALSE	canonical	3	19	junction_18	9.77989051592099	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954938	72938137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
Isoform_19848_4	chr11	+	1631	13	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	-29	2	combination_of_known_junctions	TRUE	canonical	2	2	junction_3	71.9477047738302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGTCATTAACACCCCT	NA	False	NA	15	True	AATAAA	-17	NA	26337172	26421878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
Isoform_198480_8	chrX	-	3361	22	FSM	ENSMUSG00000031389.18	ENSMUST00000064376.13	3353	22	-14	6	-8	0	multi-exon	FALSE	canonical	3	19	junction_18	9.77989051592099	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCTGAACATAGGTATG	NA	False	NA	NA	False	AATACA	-22	NA	72954950	72937963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
Isoform_198483_4	chrX	-	642	2	NIC	ENSMUSG00000031389.18	novel	555	4	NA	NA	-2	-20	intron_retention	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTAACCGGAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-25	NA	72954938	72950010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72950483_72954768
Isoform_198486_127	chrX	-	923	8	FSM	ENSMUSG00000031388.15	ENSMUST00000033763.15	962	8	39	0	1	0	multi-exon	FALSE	canonical	3	198	junction_1	315.02562254068	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGGTATGCTTTTTTT	NA	False	NA	-1	True	AATAAA	-38	NA	72965511	72960478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72960802_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
Isoform_198489_83	chrX	-	1008	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114387.8	979	8	-18	-11	0	-1	multi-exon	FALSE	canonical	3	116	junction_1	343.561063104701	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGTGGGGTATGCTTTT	NA	False	NA	-4	True	AATAAA	-35	NA	72965512	72960481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72960889_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
Isoform_19849_5	chr11	+	1027	12	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	0	-17	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	74.9367777607032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAACAAAAGCAAA	NA	False	NA	-14	True	NA	NA	NA	26337201	26421404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
Isoform_198491_655	chrX	-	1013	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	18	0	0	0	multi-exon	FALSE	canonical	3	794	junction_1	110.126457923125	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGGGTATGCTTTTT	NA	False	NA	-3	True	AATAAA	-36	NA	72965512	72960480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
Isoform_198493_11	chrX	-	1573	7	FSM	ENSMUSG00000031388.15	ENSMUST00000096316.4	892	7	-87	-594	-9	-5	multi-exon	FALSE	canonical	3	1031	junction_1	37.306910292271	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCATAGTGGGGTATGC	NA	False	NA	-8	True	AATAAA	-31	NA	72965521	72960485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
Isoform_198504_1517	chrX	-	1369	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	49	0	-9	0	multi-exon	FALSE	canonical	3	1767	junction_7	141.190120050944	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974407	72965726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
Isoform_198505_297	chrX	-	1408	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	10	0	10	0	multi-exon	FALSE	canonical	3	1767	junction_7	141.190120050944	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974446	72965726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
Isoform_198506_28	chrX	-	1300	11	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_10	590.512192930849	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974445	72965726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974426
Isoform_198507_199	chrX	-	1328	11	FSM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	-10	0	-10	0	multi-exon	FALSE	canonical	3	383	junction_8	509.144390129166	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974408	72965726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974319
Isoform_198510_36	chrX	-	1254	10	NIC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_8	580.11297324607	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974368	72965726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72974013_72974124_72974319
Isoform_19853_812	chr11	+	2556	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-4	155	0	-7	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCTATTTTTATAT	NA	False	NA	1	True	AATAAA	-13	NA	29080743	29111673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
Isoform_19854_82	chr11	+	3353	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-4	-642	0	642	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTTAAGGTATGTTT	NA	False	NA	NA	False	TTTAAA	-20	NA	29080743	29112470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
Isoform_198556_101	chrX	-	8752	26	FSM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	-623	9	-623	-4	multi-exon	FALSE	canonical	3	303	junction_17	65.7475900699029	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	False	NA	-19	True	ATTAAA	-14	NA	73010586	72986406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
Isoform_198570_33	chrX	-	8885	26	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-623	-3	combination_of_known_junctions	FALSE	canonical	3	139	junction_8	79.9086878881139	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCATCTGGTATTTAC	NA	False	NA	-18	True	ATTAAA	-15	NA	73010586	72986405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
Isoform_198577_25	chrX	-	8755	26	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	-4	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	87.5837793201458	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	False	NA	-19	True	ATTAAA	-14	NA	73010586	72986406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
Isoform_198581_10	chrX	-	8888	26	FSM	ENSMUSG00000031386.15	ENSMUST00000114372.3	8262	26	-629	3	-623	-3	multi-exon	FALSE	canonical	3	79	junction_7	97.9245913956244	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCATCTGGTATTTAC	NA	False	NA	-18	True	ATTAAA	-15	NA	73010586	72986405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
Isoform_198602_7	chrX	-	3587	15	FSM	ENSMUSG00000031392.19	ENSMUST00000033769.15	2890	15	-10	-687	-5	-358	multi-exon	FALSE	canonical	3	23	junction_4	119.77847324566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGAATTTGTTGTG	NA	False	NA	-9	True	AATAAA	-25	NA	73067529	73057889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_198603_11	chrX	-	3901	15	FSM	ENSMUSG00000031392.19	ENSMUST00000033769.15	2890	15	42	-1053	-40	0	multi-exon	FALSE	canonical	3	23	junction_4	119.77847324566	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCTTTTAATTTT	NA	False	NA	-4	True	NA	NA	NA	73067477	73057523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_198607_15	chrX	-	2756	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	5	1064	3	-11	multi-exon	FALSE	canonical	3	90	junction_10	79.7365484565473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAGAAGACT	NA	False	NA	NA	False	NA	NA	NA	73067516	73058587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_198608_31	chrX	-	3741	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	87	-3	-2	-1	multi-exon	FALSE	canonical	3	90	junction_10	79.7365484565473	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTTTAATTTTCTT	NA	False	NA	-1	True	NA	NA	NA	73067434	73057520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_198609_14	chrX	-	3832	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	-7	0	-4	0	multi-exon	FALSE	canonical	3	90	junction_10	79.7365484565473	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCTTTTAATTTT	NA	False	NA	-4	True	NA	NA	NA	73067528	73057523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_198611_35	chrX	-	3361	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	87	377	-2	-369	multi-exon	FALSE	canonical	3	90	junction_10	79.7365484565473	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTTAAACTTGTGG	NA	False	NA	-20	True	AATAAA	-14	NA	73067434	73057900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_198620_67	chrX	-	3376	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	88	371	1	-359	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067436	73057890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_198621_66	chrX	-	3839	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	-5	1	-5	-1	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTTTAATTTTCTT	NA	False	NA	-1	True	NA	NA	NA	73067529	73057520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_198639_154	chrX	-	1814	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	30	8694	-27	2	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGAGTTTCGTGGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	73129245	73078891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
Isoform_198641_5	chrX	-	1896	5	NNC	ENSMUSG00000031393.17	novel	1675	5	NA	NA	-7	2	intron_retention	FALSE	canonical	1	2	junction_3	91.2811590636315	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGAGTTTCGTGGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	73129225	73078891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_73080101_73080587_73080939_73123514_73123639_73124088_73124191_73129115
Isoform_198642_165	chrX	-	1751	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	-10	-2	-10	2	multi-exon	FALSE	canonical	3	119	junction_2	51.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGAGTTTCGTGGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	73129306	73078891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73080101_73080587_73080939_73129115
Isoform_198643_175	chrX	-	1670	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	71	-2	-7	2	multi-exon	FALSE	canonical	3	119	junction_2	51.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGAGTTTCGTGGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	73129225	73078891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73080101_73080587_73080939_73129115
Isoform_198676_93	chrX	-	8246	47	FSM	ENSMUSG00000031328.17	ENSMUST00000033699.13	8312	47	144	-78	-13	0	multi-exon	FALSE	canonical	3	112	junction_19	126.416146359915	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73290017	73267068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
Isoform_198715_304	chrX	-	8223	46	FSM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	123	-1	-13	-1	multi-exon	FALSE	canonical	3	440	junction_27	88.6461017644018	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGCTTTCATGGAAGGA	NA	False	NA	-4	True	AATAAA	-24	NA	73290017	73267067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
Isoform_198716_15	chrX	-	8354	46	FSM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	-11	2	10	-2	multi-exon	FALSE	canonical	3	440	junction_27	88.6461017644018	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAGCTTTCATGGAA	NA	False	NA	-7	True	AATAAA	-21	NA	73290151	73267070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
Isoform_19872_48	chr11	+	2317	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	86	7	86	-7	multi-exon	FALSE	canonical	3	259	junction_3	30.8097333552481	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCACTTATTTTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	29122975	29159634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
Isoform_198720_14	chrX	-	1543	8	FSM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	81	1	20	0	multi-exon	FALSE	canonical	2	3	junction_5	3.01018678652935	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGTATGCTTAATTCAA	NA	False	NA	NA	False	AATAAA	-16	NA	73325261	73316823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644_73320949_73325126
Isoform_198721_69	chrX	-	744	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	-7	9	-7	-9	multi-exon	FALSE	canonical	3	109	junction_1	662	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTATTTTCAGCCT	4529	False	NA	-28	True	AATAAA	-20	NA	73397188	73395776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73396105_73396450_73396609_73396930
Isoform_198725_816	chrX	-	750	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	8	3	8	-2	multi-exon	FALSE	canonical	3	1433	junction_2	31	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTCAGCCTCTAAATT	4501	False	NA	-21	True	AATAAA	-27	NA	73397216	73395769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73396105_73396479_73396609_73396930
Isoform_198726_40	chrX	-	812	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	-54	3	-54	-2	multi-exon	FALSE	canonical	3	1433	junction_2	31	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTCAGCCTCTAAATT	4439	False	NA	-21	True	AATAAA	-27	NA	73397278	73395769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73396105_73396479_73396609_73396930
Isoform_198728_11	chrX	-	1087	2	FSM	ENSMUSG00000015289.5	ENSMUST00000114153.2	1997	2	14	896	-5	-10	multi-exon	FALSE	canonical	3	1433	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCTTATTTTCAGCC	4531	False	NA	-29	True	AATAAA	-19	NA	73397186	73395777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73396609_73396930
Isoform_19873_9	chr11	+	2373	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	30	7	30	-7	multi-exon	FALSE	canonical	3	259	junction_3	30.8097333552481	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCACTTATTTTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	29122919	29159634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
Isoform_198732_654	chrX	-	2299	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	143	0	-17	0	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	-6	True	AATAAA	-20	NA	73412136	73409323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
Isoform_198733_18	chrX	-	2446	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	147	-151	-13	151	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGTGTGTGCAGATG	NA	False	NA	NA	False	AATAAA	-16	NA	73412132	73409172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
Isoform_198735_654	chrX	-	612	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	147	1683	-13	64	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGCTCATAGTGATAAT	NA	False	NA	-1	True	ATTAAA	-18	NA	73412132	73411006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
Isoform_198745_60	chrX	-	1948	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	53	22	9	-22	multi-exon	FALSE	canonical	3	11	junction_2	8.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAAAACAA	NA	False	NA	NA	False	AATATA	-9	NA	73416902	73412844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73414618_73416219_73416289_73416796
Isoform_198746_7	chrX	-	1977	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	24	22	-20	-22	multi-exon	FALSE	canonical	3	11	junction_2	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAAAACAA	NA	False	NA	NA	False	AATATA	-9	NA	73416931	73412844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73414618_73416219_73416289_73416796
Isoform_198747_17	chrX	-	1853	2	FSM	ENSMUSG00000032806.14	ENSMUST00000073067.11	1910	2	35	22	-24	-22	multi-exon	FALSE	canonical	3	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAAAACAA	NA	False	NA	NA	False	AATATA	-9	NA	73416876	73412844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73414618_73416796
Isoform_198748_40	chrX	-	1875	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	24	0	7	0	multi-exon	FALSE	canonical	3	109	junction_1	16.2322017915007	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGAGTCAAGGGTGGTG	NA	False	NA	-6	True	AATAAA	-43	NA	73436854	73428324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
Isoform_198749_126	chrX	-	1819	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	80	0	-10	0	multi-exon	FALSE	canonical	3	109	junction_1	16.2322017915007	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGAGTCAAGGGTGGTG	NA	False	NA	-6	True	AATAAA	-43	NA	73436798	73428324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
Isoform_198752_26	chrX	-	1484	10	NIC	ENSMUSG00000031399.16	novel	814	9	NA	NA	23	18	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	35.9828491381487	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTGTATTCAGATGTC	NA	False	NA	-30	True	AATAAA	-19	NA	73436838	73428348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280_73436354_73436704
Isoform_198753_8	chrX	-	1444	10	NIC	ENSMUSG00000031399.16	novel	1899	9	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	35.9828491381487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGAGTCAAGGGTGGTG	NA	False	NA	-6	True	AATAAA	-43	NA	73436774	73428324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280_73436354_73436704
Isoform_198754_3	chrX	-	1942	9	NIC	ENSMUSG00000031399.16	novel	1899	9	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_6	44.5882201371618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGAGTCAAGGGTGGTG	NA	False	NA	-6	True	AATAAA	-43	NA	73436866	73428324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431413_73434079_73434104_73434596_73434711_73436280
Isoform_198755_4	chrX	-	1905	9	NNC	ENSMUSG00000031399.16	novel	1899	9	NA	NA	28	18	intron_retention	FALSE	canonical	0	0	junction_3	42.6731765867037	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTGTATTCAGATGTC	NA	False	NA	-30	True	AATAAA	-19	NA	73436833	73428348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_73429042_73430027_73430155_73430237_73430398_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
Isoform_198758_80	chrX	-	2409	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	239	4	-75	-4	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACCTGTCTCCTTGTTCT	NA	False	NA	-10	True	ATTAAA	-14	NA	73472561	73453092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
Isoform_198759_670	chrX	-	2335	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	314	3	0	-3	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGTCTCCTTGTTCTT	NA	False	NA	-9	True	ATTAAA	-15	NA	73472486	73453091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
Isoform_198761_12	chrX	-	5573	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	315	-3236	1	3236	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGATTATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	73472485	73449852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
Isoform_198763_11	chrX	-	2339	13	NIC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	87.1626831467075	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGTCTCCTTGTTCTT	NA	False	NA	-9	True	ATTAAA	-15	NA	73472487	73453091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456087_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
Isoform_198765_21	chrX	-	912	3	FSM	ENSMUSG00000079536.2	ENSMUST00000114125.2	627	3	-119	-166	-119	166	multi-exon	FALSE	canonical	3	15	junction_1	3.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTCATCTGATTTT	NA	False	NA	NA	False	AATAAA	-9	NA	73525124	73523726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_73524038_73524213_73524343_73524652
Isoform_198766_10	chrX	-	1715	3	FSM	ENSMUSG00000032750.14	ENSMUST00000127024.2	750	3	-25	-940	-25	1	multi-exon	FALSE	canonical	3	11	junction_2	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTTTCTTAGTTTTTT	2154	False	NA	NA	False	ATTAAA	-21	NA	74012756	74010447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_74011592_74011767_74011897_74012314
Isoform_198768_411	chrX	-	1965	12	FSM	ENSMUSG00000031402.13	ENSMUST00000033775.9	2525	12	14	546	14	369	multi-exon	FALSE	canonical	3	210	junction_6	19.4626151487859	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACCCGTGACCCTGTAA	NA	False	NA	-11	True	AATAAA	-16	NA	74174608	74153884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
Isoform_198773_5	chrX	-	2506	11	NIC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	10	369	intron_retention	FALSE	canonical	3	210	junction_5	20.4068615911414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACCCGTGACCCTGTAA	NA	False	NA	-11	True	AATAAA	-16	NA	74174582	74153884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
Isoform_198775_19	chrX	-	686	4	FSM	ENSMUSG00000090110.9	ENSMUST00000149863.3	507	4	-2	-177	-2	-3	multi-exon	FALSE	canonical	3	61	junction_2	9.20144916122817	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGGTTTGTTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	74460192	74448454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_74448825_74453151_74453220_74459620_74459820_74460143
Isoform_198776_6	chrX	-	759	4	NNC	ENSMUSG00000090110.9	novel	507	4	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	27.1825107171668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTTGGTTTGTTACT	NA	False	NA	NA	False	AATAAA	-13	NA	74460140	74448455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_74448825_74453151_74453220_74459620_74459820_74460017
Isoform_198778_11	chrX	-	2588	7	NIC	ENSMUSG00000031200.17	novel	980	6	NA	NA	-7	5595	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	21.2243309016379	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGGTTTGTTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	74460201	74448454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_74448825_74453151_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460143
Isoform_198779_3	chrX	-	1771	5	FSM	ENSMUSG00000031200.17	ENSMUST00000033542.11	1592	5	-6	-173	-6	173	multi-exon	FALSE	canonical	3	22	junction_1	5.33853912601566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGCTTTTGCGTTTTAA	NA	False	NA	NA	False	ATTAAA	-24	NA	74460155	74453876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620
Isoform_198780_12	chrX	-	1481	6	FSM	ENSMUSG00000031200.17	ENSMUST00000114081.2	980	6	4	-505	4	172	multi-exon	FALSE	canonical	3	22	junction_1	14.0370937162933	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTTTTGCGTTTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	74460190	74453877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460143
Isoform_198781_4	chrX	-	960	2	FSM	ENSMUSG00000031202.6	ENSMUST00000033545.6	3401	2	-4	2445	-4	-2445	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTTTGGATAATAAATGAG	438	False	NA	NA	False	AATAAA	-31	NA	74621841	74618096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_74618614_74621398
Isoform_198782_4	chrX	-	3394	2	FSM	ENSMUSG00000031202.6	ENSMUST00000033545.6	3401	2	-1	8	-1	-8	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCCATATGTGTGTT	441	False	NA	NA	False	AGTAAA	-20	NA	74621838	74615659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_74618614_74621398
Isoform_198786_7	chrX	-	3145	17	NIC	ENSMUSG00000016382.16	novel	3149	16	NA	NA	36	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	100.453269608311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTCTACTCTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	74918752	74829269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74917943_74917986_74918653
Isoform_198787_139	chrX	-	3121	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	18	10	18	-1	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTCTACTCTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	74918770	74829269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
Isoform_198788_480	chrX	-	3088	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	47	14	-36	0	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATTCTCTACTCTC	NA	False	NA	NA	False	AATAAA	-12	NA	74918741	74829273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
Isoform_198789_8	chrX	-	3066	16	NNC	ENSMUSG00000016382.16	novel	3032	16	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	80.1414305393215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTCTACTCTCTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	74918661	74829268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918600
Isoform_198796_38	chrX	-	4274	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	311	-439	5	439	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	76839573	76804577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
Isoform_198798_9	chrX	-	4319	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	266	-439	-40	439	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	76839618	76804577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
Isoform_1988_4	chr10	-	2380	5	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-6	1	intron_retention	FALSE	canonical	3	150	junction_4	21.1187120819429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTGGCTCTACCTTGT	NA	False	NA	-5	True	AATAAA	-15	NA	41366342	41363172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41363579_41363667_41363822_41363988_41365348_41365459_41365557_41365978
Isoform_198802_5	chrX	-	4034	7	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	27	437	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.7800404448525	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTTCAGGTCGTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	76839551	76804579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76825643_76825908_76829733_76829903_76839153
Isoform_198803_8	chrX	-	3895	4	FSM	ENSMUSG00000047996.17	ENSMUST00000114024.9	3900	4	4	1	-1	-1	multi-exon	FALSE	canonical	3	8	junction_1	4.64279609239471	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTGTTTTTCTTATAT	NA	False	NA	NA	False	AATAAA	-17	NA	77627498	77493219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_77496779_77527356_77527518_77564376_77564428_77627374
Isoform_198804_428	chrX	-	1723	3	FSM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	1	1	1	-1	multi-exon	FALSE	canonical	3	241	junction_2	42	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCTCTCTTTTATTA	NA	False	NA	-1	True	AATAAA	-21	NA	78679187	78666837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_78668390_78671446_78671527_78679096
Isoform_198805_66	chrX	-	1941	4	FSM	ENSMUSG00000046942.18	ENSMUST00000052283.7	1854	4	-88	1	-88	-1	multi-exon	FALSE	canonical	3	76	junction_2	116.448367194316	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCTCTCTTTTATTA	NA	False	NA	-1	True	AATAAA	-21	NA	78715129	78666837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_78668390_78671446_78671527_78685326_78685395_78714888
Isoform_198808_12	chrX	-	1897	4	NNC	ENSMUSG00000046942.18	novel	1725	3	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	145.164274760241	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCTCTCTTTTATTA	NA	False	NA	-1	True	AATAAA	-21	NA	78679164	78666837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_78668390_78671446_78671527_78673369_78673567_78679096
Isoform_198809_8	chrX	-	1986	5	NNC	ENSMUSG00000046942.18	novel	1854	4	NA	NA	64	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	126.903506649738	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCTCTCTTTTATTA	NA	False	NA	-1	True	AATAAA	-21	NA	78714977	78666837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_78668390_78671446_78671527_78673369_78673567_78685326_78685395_78714888
Isoform_198810_7	chrX	-	2145	5	NNC	ENSMUSG00000046942.18	novel	1854	4	NA	NA	-98	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	126.903506649738	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTGTGCTCTCTTTTA	NA	False	NA	-4	True	AATAAA	-18	NA	78715139	78666840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_78668390_78671446_78671527_78673369_78673567_78685326_78685395_78714888
Isoform_198812_7	chrX	-	2931	21	FSM	ENSMUSG00000025059.17	ENSMUST00000113978.9	4279	21	-27	1375	-27	-1375	multi-exon	FALSE	canonical	3	8	junction_12	44.8534000940843	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTTTTCCATATTTG	NA	False	NA	-6	True	AATAAA	-14	NA	84820286	84746917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84782827_84782846_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_198813_19	chrX	-	3624	21	FSM	ENSMUSG00000025059.17	ENSMUST00000113978.9	4279	21	-3	658	-3	-658	multi-exon	FALSE	canonical	3	8	junction_12	44.8534000940843	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820262	84746200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84782827_84782846_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_198815_17	chrX	-	3656	21	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	2	-658	combination_of_known_junctions	TRUE	canonical	3	6	junction_17	45.7159436083299	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820228	84746200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_198818_99	chrX	-	3572	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	15	658	2	-658	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820228	84746200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_198821_8	chrX	-	2015	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-44	2274	-28	-2274	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATCCTCCAGAAACATT	NA	False	NA	NA	False	AATAAA	-15	NA	84820287	84747816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_19883_124	chr11	+	5037	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	88	0	88	0	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122977	29170797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
Isoform_198830_10	chrX	-	3549	19	FSM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	133	658	-33	-658	multi-exon	FALSE	canonical	3	19	junction_1	33.6576812358314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820292	84746200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_198832_17	chrX	-	3494	19	FSM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	187	659	5	-659	multi-exon	FALSE	canonical	3	19	junction_1	33.6576812358314	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	-6	True	AATAAA	-18	NA	84820238	84746201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_198834_16	chrX	-	2442	3	FSM	ENSMUSG00000035427.19	ENSMUST00000113969.10	2403	3	-30	-9	-30	9	multi-exon	FALSE	canonical	3	26	junction_1	2.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTTTGCTCAATAG	NA	False	NA	NA	False	AATAAA	-21	NA	85299855	85293850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_85296089_85298945_85299028_85299733
Isoform_198868_629	chrX	-	5336	37	FSM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	0	10	0	-10	multi-exon	FALSE	canonical	3	370	junction_20	43.7489682418023	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAACCAGTTACTGTG	4277	False	NA	-12	True	AATAAA	-9	NA	92675761	92348382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
Isoform_198871_33	chrX	-	5205	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	2	-10	combination_of_known_splicesites	FALSE	canonical	3	18	junction_25	84.0379408969787	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAACCAGTTACTGTG	4291	False	NA	-12	True	AATAAA	-9	NA	92675747	92348382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
Isoform_198876_25	chrX	-	5247	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	83.6951221361661	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTTACTGTGTTTT	4276	False	NA	-8	True	AATAAA	-13	NA	92675762	92348378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_92349423_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
Isoform_19888_94	chr11	+	5088	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	30	7	30	-7	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATTCACGTGTTTTA	NA	False	NA	16	True	AATAAA	-28	NA	29122919	29170790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
Isoform_198882_42	chrX	-	2310	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	28	-223	28	223	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTCATTGTCATTACT	NA	False	NA	NA	False	NA	NA	NA	92875779	92807989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_198883_625	chrX	-	2069	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	28	18	28	-18	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGAATTTCTCACTTA	NA	False	NA	-20	True	ATTAAA	-15	NA	92875779	92808230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_198884_19	chrX	-	2111	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	-15	19	-15	-19	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGAATTTCTCACTT	NA	False	NA	-21	True	ATTAAA	-14	NA	92875822	92808231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_198886_15	chrX	-	2525	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	27	-437	27	437	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTCTCAATTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	92875780	92807775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_19889_8	chr11	+	4347	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	-24	802	-24	-802	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCATGATTGAGGCTT	NA	False	NA	3	True	ATTAAA	-12	NA	29122865	29169995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
Isoform_1989_3	chr10	-	755	4	NNC	ENSMUSG00000075225.16	novel	2742	18	NA	NA	7891	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATTTCAAAGCTCCT	NA	False	NA	NA	False	AATAAA	-10	NA	41420954	41414844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_41415301_41415416_41415539_41417769_41417898_41420905
Isoform_198901_29	chrX	-	6719	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	277	6	2	-5	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACCCTAGTGGAGTGT	NA	False	NA	-7	True	AATAAA	-16	NA	93166736	93118242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
Isoform_198903_4	chrX	-	5621	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	4	1377	4	-1376	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCATCCCCCTATTT	NA	False	NA	99	True	AATAAA	-17	NA	93167009	93119613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
Isoform_198904_9	chrX	-	5512	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	11	1479	11	-1478	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAATGTTCAGTCTATTTG	NA	False	NA	-3	True	AATAAA	-22	NA	93167002	93119715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
Isoform_198905_8	chrX	-	5295	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	270	1368	-5	-1368	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCCTATTTCTTAATTC	NA	False	NA	NA	False	AATAAA	-25	NA	93166743	93119605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
Isoform_198907_9	chrX	-	5187	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	268	1478	-7	-1478	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAATGTTCAGTCTATTTG	NA	False	NA	-3	True	AATAAA	-22	NA	93166745	93119715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
Isoform_198908_7	chrX	-	5454	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	0	1479	0	-1479	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATGTTCAGTCTATTT	NA	False	NA	-4	True	AATAAA	-21	NA	93167013	93119716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
Isoform_198911_5	chrX	-	6928	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	2	3	2	-3	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCCTAGTGGAGTGTTG	NA	False	NA	-5	True	AATAAA	-18	NA	93167011	93118240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
Isoform_198912_6	chrX	-	6678	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26931	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	39.1371215818727	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTAGTGGAGTGTTGGC	NA	False	NA	-3	True	AATAAA	-20	NA	93194239	93118238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93194153
Isoform_198914_5	chrX	-	5231	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26961	-1478	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	39.1371215818727	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAATGTTCAGTCTATTTG	NA	False	NA	-3	True	AATAAA	-22	NA	93194269	93119715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93194153
Isoform_198915_4	chrX	-	6781	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	557	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	38.1308167192032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCCTAGTGGAGTGTTG	NA	False	NA	-5	True	AATAAA	-18	NA	93165949	93118240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93165758
Isoform_198916_3	chrX	-	6575	8	NIC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	40.1629334646985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	NA	False	NA	-1	True	AATAAA	-22	NA	93166736	93118236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93157801_93157870_93166673
Isoform_198917_3	chrX	-	5025	7	NIC	ENSMUSG00000079509.11	novel	6933	8	NA	NA	4	-1479	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	48.606126728588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATGTTCAGTCTATTT	NA	False	NA	-4	True	AATAAA	-21	NA	93166734	93119716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93166673
Isoform_198918_3	chrX	-	6523	7	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26931	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	51.9339858752329	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACCCTAGTGGAGTG	NA	False	NA	-8	True	AATAAA	-15	NA	93194239	93118243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93194153
Isoform_198942_2278	chrX	-	3584	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	63	0	5	0	multi-exon	TRUE	canonical	3	1008	junction_2	64.9970120101527	2278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256252	93232312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
Isoform_198943_285	chrX	-	3615	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	32	0	-26	0	multi-exon	FALSE	canonical	3	1008	junction_2	64.9970120101527	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256283	93232312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
Isoform_198949_53	chrX	-	3679	12	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_11	299.322651309213	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256553	93232312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256376
Isoform_198975_4951	chrX	-	2699	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	121	1	-19	-1	multi-exon	TRUE	canonical	3	1240	junction_10	166.264514821681	4951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGCTTCTCATCT	NA	False	NA	-3	True	AATAAA	-20	NA	93585628	93579080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
Isoform_198976_69	chrX	-	2760	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	60	1	60	-1	multi-exon	FALSE	canonical	3	1240	junction_10	166.264514821681	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGCTTCTCATCT	NA	False	NA	-3	True	AATAAA	-20	NA	93585689	93579080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
Isoform_198980_109	chrX	-	2626	12	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-20	-1	combination_of_known_splicesites	FALSE	canonical	3	123	junction_11	424.670839962022	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGCTTCTCATCT	NA	False	NA	-3	True	AATAAA	-20	NA	93585629	93579080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93585497
Isoform_198983_72	chrX	-	2917	12	FSM	ENSMUSG00000025151.17	ENSMUST00000153386.8	2884	12	-32	-1	-19	-1	multi-exon	FALSE	canonical	3	1240	junction_9	165.668493041908	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGCTTCTCATCT	NA	False	NA	-3	True	AATAAA	-20	NA	93585628	93579080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
Isoform_198994_13	chrX	-	8490	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	5	1	5	-1	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAAGTGTTTTCTTGTTG	NA	False	NA	NA	False	AATAAA	-29	NA	94488473	94463924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_94472205_94488263
Isoform_198996_46	chrX	-	2136	5	FSM	ENSMUSG00000035062.14	ENSMUST00000044382.7	2219	5	87	-4	-14	1	multi-exon	FALSE	canonical	3	32	junction_1	3.76662979332984	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTAACTGAGTGCATTC	968	False	NA	NA	False	AATAAA	-19	NA	94702028	94682800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_94684258_94685769_94685933_94686913_94687087_94688912_94689085_94701857
Isoform_198999_38	chrX	-	2583	14	FSM	ENSMUSG00000057421.13	ENSMUST00000113864.3	2581	14	11	-13	11	13	multi-exon	FALSE	canonical	3	26	junction_5	331.353544718678	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAGATGAGGGATG	NA	False	NA	-23	True	AATAAA	-17	NA	95000508	94978927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991003_94991055_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
Isoform_199_12	ERCC-00157	+	999	1	FSM	ERCC-00157A	DQ839618	1003	1	2	2	2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TC	NA	False	NA	NA	False	NA	NA	NA	2	1001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00157_+_0_1000
Isoform_1990_3	chr10	-	1094	4	ISM	ENSMUSG00000075225.16	ENSMUST00000189488.3	7260	48	103476	59289	-321	11869	internal_fragment	FALSE	canonical	2	3	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTCTGAAGAGTTCATT	1220	False	NA	NA	False	ATTAAA	-22	NA	41489154	41474133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_41474552_41481046_41481213_41482567_41482689_41488765
Isoform_199007_1354	chrX	-	2533	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	11	-14	11	14	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGAGATGAGGGATGT	NA	False	NA	-22	True	AATAAA	-18	NA	95000508	94978926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
Isoform_199009_136	chrX	-	2577	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	-26	-21	23	21	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGGGATGTGTAAGTT	NA	False	NA	-15	True	AATAAA	-25	NA	95000545	94978919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
Isoform_199010_36	chrX	-	3397	12	NIC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	11	15	intron_retention	FALSE	canonical	3	815	junction_5	68.2767823514294	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGATGAGGGATGTG	NA	False	NA	-21	True	AATAAA	-19	NA	95000508	94978925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
Isoform_199012_29	chrX	-	4091	11	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	11	13	intron_retention	FALSE	canonical	3	852	junction_3	60.377230807648	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAGATGAGGGATG	NA	False	NA	-23	True	AATAAA	-17	NA	95000508	94978927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
Isoform_199024_7	chrX	-	2970	12	FSM	ENSMUSG00000045802.14	ENSMUST00000059003.5	1479	12	-140	-1351	-140	6	multi-exon	FALSE	canonical	2	9	junction_1	7.96998501611043	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGCATCATGTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	95411665	95349777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_95351419_95355322_95355384_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400850_95411426
Isoform_199025_6	chrX	-	2943	11	NIC	ENSMUSG00000045802.14	novel	1479	12	NA	NA	-178	2	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	7.69675256195754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCATGGCATCATGT	NA	False	NA	NA	False	AATAAA	-12	NA	95411703	95349781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_95351419_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400850_95411426
Isoform_199026_4	chrX	-	746	4	ISM	ENSMUSG00000045802.14	ENSMUST00000059003.5	1479	12	-138	21844	-138	-8690	5prime_fragment	FALSE	canonical	3	25	junction_2	5.31245915016974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGAATTGCTACTATG	NA	False	NA	NA	False	ATTAAA	-26	NA	95411663	95372972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_95373245_95382022_95382151_95400740_95400850_95411426
Isoform_199027_18	chrX	-	4725	8	FSM	ENSMUSG00000034457.11	ENSMUST00000037353.10	4752	8	25	2	-19	-2	multi-exon	FALSE	canonical	3	19	junction_1	34.3130843134516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTTGTTTATTCC	NA	False	NA	-25	True	AATAAA	-12	NA	96420797	96377447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
Isoform_199029_7	chrX	-	4760	8	FSM	ENSMUSG00000034457.11	ENSMUST00000113832.2	1433	8	-29	-3298	-7	0	multi-exon	FALSE	canonical	3	11	junction_7	44.9743691178767	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTGTTTATTCCTC	NA	False	NA	-23	True	AATAAA	-14	NA	96420785	96377445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414907_96420706
Isoform_199030_5	chrX	-	4330	7	NIC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	-19	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	42.8744938421694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	-20	True	AATAAA	-17	NA	96420797	96377442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_96381057_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
Isoform_199033_47	chrX	-	6117	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	-17	-3947	-17	-4	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAATGCCTTGTTTATT	NA	False	NA	-27	True	AATAAA	-10	NA	96420839	96377449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
Isoform_199035_6	chrX	-	7558	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	48	-5453	4	1502	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTCATGATCAC	NA	False	NA	NA	False	NA	NA	NA	96420774	96375943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
Isoform_199036_3	chrX	-	6167	7	NIC	ENSMUSG00000034457.11	novel	1433	8	NA	NA	-17	1	intron_retention	FALSE	canonical	3	11	junction_6	38.9419083022676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTGTTTATTCCTCG	NA	False	NA	-22	True	AATAAA	-15	NA	96420839	96377444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414907_96420706
Isoform_199038_3	chrX	-	3839	25	FSM	ENSMUSG00000031214.14	ENSMUST00000033560.9	7170	25	-40	3371	0	603	multi-exon	TRUE	canonical	1	4	junction_23	4.90959944055181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACATTTCTGTTAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	97934631	97601253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986
Isoform_199039_6	chrX	-	3181	25	FSM	ENSMUSG00000031214.14	ENSMUST00000033560.9	7170	25	11	3978	11	2	multi-exon	FALSE	canonical	1	4	junction_23	4.90959944055181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACGTGTTTGTTTCTCCT	NA	False	NA	NA	False	TATAAA	-20	NA	97934580	97601860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986
Isoform_19904_6	chr11	+	7477	30	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	-62	5245	-62	758	5prime_fragment	TRUE	canonical	3	45	junction_8	9.8353871035569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTGTATTTTTACTTC	NA	False	NA	NA	False	AATAAA	-21	NA	29323595	29455563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
Isoform_199042_87	chrX	-	1745	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-10	373	-5	3	multi-exon	FALSE	canonical	3	92	junction_1	143.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGCATCATTTGGATT	NA	False	NA	-1	True	ATTAAA	-25	NA	98514303	98509716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_98511189_98511728_98511921_98514222
Isoform_199043_22	chrX	-	2084	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-5	29	0	1	multi-exon	FALSE	canonical	3	92	junction_1	143.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAATAAATA	NA	False	NA	NA	False	AAAACA	-21	NA	98514298	98509372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_98511189_98511728_98511921_98514222
Isoform_199048_387	chrX	-	2288	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	35	343	-8	3	multi-exon	FALSE	canonical	3	379	junction_1	0	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGCATCATTTGGATT	NA	False	NA	-1	True	ATTAAA	-25	NA	98514306	98509716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_98511921_98514222
Isoform_199050_76	chrX	-	2645	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	22	-1	-21	1	multi-exon	FALSE	canonical	3	379	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAATAAATA	NA	False	NA	NA	False	AAAACA	-21	NA	98514319	98509372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_98511921_98514222
Isoform_199057_202	chrX	-	2567	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	-1	-3	-1	3	multi-exon	FALSE	canonical	3	84	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGCATCATTTGGATT	NA	False	NA	-1	True	ATTAAA	-25	NA	98514299	98509716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_98512207_98514222
Isoform_199058_27	chrX	-	2915	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	-5	-347	-5	1	multi-exon	FALSE	canonical	3	84	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAATAAATA	NA	False	NA	NA	False	AAAACA	-21	NA	98514303	98509372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_98512207_98514222
Isoform_199061_107	chrX	-	1037	7	FSM	ENSMUSG00000015668.14	ENSMUST00000059099.7	1041	7	29	-25	29	0	multi-exon	FALSE	canonical	3	137	junction_6	158.307366291724	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	-4	True	AATAAA	-17	NA	99669512	99666488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
Isoform_199066_234	chrX	-	1000	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	627	-1	-3	1	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACTGCTTGAATATAAA	NA	False	NA	-6	True	AATAAA	-15	NA	99669547	99666490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
Isoform_19907_4	chr11	+	9331	32	FSM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	44	1	44	-1	multi-exon	FALSE	canonical	3	30	junction_31	11.5379300285811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTGTTACAGTCATTT	NA	False	NA	NA	False	AATAAA	-20	NA	29323701	29460807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
Isoform_199070_14	chrX	-	1071	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	558	-3	-72	0	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	-4	True	AATAAA	-17	NA	99669616	99666488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
Isoform_199072_9	chrX	-	3560	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	647	-2581	14	2578	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGAGTGACACACTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	99669527	99663910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
Isoform_199073_14	chrX	-	1352	5	NIC	ENSMUSG00000015668.14	novel	1626	7	NA	NA	17	0	intron_retention	FALSE	canonical	3	301	junction_4	119.69962405956	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	-4	True	AATAAA	-17	NA	99669524	99666488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
Isoform_199074_126	chrX	-	3271	30	FSM	ENSMUSG00000009670.12	ENSMUST00000009814.10	3250	30	-20	-1	8	1	multi-exon	TRUE	canonical	3	57	junction_17	8.2193472636908	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATTGATCAGCTGATTT	NA	False	NA	-4	True	AATAAA	-17	NA	100103265	99882252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
Isoform_199076_9	chrX	-	2584	25	FSM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	8	-1	8	1	multi-exon	FALSE	canonical	3	11	junction_1	14.9015286315047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGCTAAGTTTAACATC	NA	False	NA	NA	False	NA	NA	NA	100103265	99921486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_99921832_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
Isoform_199077_3	chrX	-	4585	25	FSM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	7	-2001	7	2001	multi-exon	FALSE	canonical	3	11	junction_1	14.9015286315047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCTATTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	100103266	99919486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_99921832_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
Isoform_199095_105	chrX	-	2391	13	FSM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	-20	0	0	0	multi-exon	FALSE	canonical	3	84	junction_12	497.596780089618	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128978	100122826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128585_100128877
Isoform_199098_68	chrX	-	2371	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_12	505.338500413337	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128977	100122826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128566_100128877
Isoform_199100_2276	chrX	-	2231	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	1	0	1	0	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	2276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
Isoform_199101_67	chrX	-	2281	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	-48	-1	-15	0	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100129026	100122826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
Isoform_199102_81	chrX	-	2312	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	1	-81	1	69	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAAGTGTCTTGTGTCTT	NA	False	NA	NA	False	TATAAA	-28	NA	100128977	100122746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
Isoform_199107_76	chrX	-	2164	12	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	409.125251083797	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128791	100122826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128759
Isoform_199114_35	chrX	-	2673	11	FSM	ENSMUSG00000031297.15	ENSMUST00000138162.2	2717	11	33	11	0	0	multi-exon	FALSE	canonical	3	1250	junction_10	85.0282306060758	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128978	100122826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
Isoform_199119_104	chrX	-	1095	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	20	-1	16	1	multi-exon	FALSE	canonical	3	192	junction_2	126.702170462861	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCAGCTAGTTTCTC	NA	False	NA	-10	True	NA	NA	NA	100266139	100141390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
Isoform_19912_34	chr11	+	2625	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	-33	-167	7	167	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGGTAAATATTTTC	NA	False	NA	0	True	NA	NA	NA	29476414	29495446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
Isoform_199126_62	chrX	-	957	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	44	1	30	-1	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCGTTTTTCTCCTTA	NA	False	NA	-16	True	ATTAAA	-14	NA	100266125	100255565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
Isoform_199127_24	chrX	-	989	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	12	1	-2	-1	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCGTTTTTCTCCTTA	NA	False	NA	-16	True	ATTAAA	-14	NA	100266157	100255565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
Isoform_199129_250	chrX	-	2307	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	62	-2	at_least_one_novel_splicesite	FALSE	non_canonical	2	40	junction_1	181.166187518532	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCGTTTTTCTCCTT	NA	False	NA	-17	True	ATTAAA	-13	NA	100266093	100255566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_100256360_100256403_100257471_100258006_100258132_100259088_100259185_100265867
Isoform_199131_6	chrX	-	674	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	-1	1742	-1	-214	multi-exon	FALSE	canonical	3	422	junction_3	23.8094285712381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCTCTCTTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	100266156	100257306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
Isoform_199134_26	chrX	-	1604	8	FSM	ENSMUSG00000031304.19	ENSMUST00000033664.14	1670	8	56	10	-9	-10	multi-exon	FALSE	canonical	3	20	junction_5	5.61702950038214	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAAGAATGTCTGTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	100311805	100307993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100308644_100308981_100309049_100309235_100309333_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
Isoform_199135_4	chrX	-	1534	7	NIC	ENSMUSG00000031304.19	novel	1670	8	NA	NA	29	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	12.0611866009204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAAGAATGTCTGTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	100311832	100307993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100308644_100308981_100309049_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
Isoform_199142_29	chrX	-	5481	25	FSM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	84	-1	-1	1	multi-exon	FALSE	canonical	3	54	junction_18	23.7530334320108	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTTCTCTGGGGGAG	NA	False	NA	-1	True	AATAAA	-15	NA	100463436	100447988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
Isoform_199146_6	chrX	-	5367	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	13	-4	combination_of_known_junctions	FALSE	canonical	2	22	junction_24	26.7114207783862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTGCTTTCTCTGG	NA	False	NA	-6	True	AATAAA	-10	NA	100463957	100447993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463933
Isoform_199147_3	chrX	-	4939	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_23	27.635241942531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463418	100447990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100462400_100462559_100463303
Isoform_199148_18	chrX	-	5499	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_18	23.4366388730694	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463450	100447990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
Isoform_199149_49	chrX	-	5436	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_18	23.4366388730694	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463387	100447990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
Isoform_199151_9	chrX	-	5400	25	NIC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	2	22	junction_24	26.5045855571363	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTTCTCTGGGGGAG	NA	False	NA	-1	True	AATAAA	-15	NA	100463979	100447988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463933
Isoform_199152_3	chrX	-	4945	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_23	27.4347394840111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463418	100447990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100462400_100462559_100463303
Isoform_199153_4	chrX	-	5465	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	29.1317648319188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463437	100447990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
Isoform_199154_9	chrX	-	1859	7	ISM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	100	10545	-5	0	5prime_fragment	FALSE	canonical	3	74	junction_4	23.7065391822594	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCCTCTCCTTCCCC	NA	False	NA	0	True	NA	NA	NA	100463420	100458534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
Isoform_199155_9	chrX	-	1905	7	FSM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	-54	8	-3	0	multi-exon	FALSE	canonical	3	84	junction_4	20.0637871688163	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCCAGCCTCAGCCTC	NA	False	NA	-9	True	NA	NA	NA	100463469	100458543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
Isoform_199157_4	chrX	-	1346	7	NIC	ENSMUSG00000031310.17	novel	1859	7	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	45.7711699653832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGCCTCAGCCTCTCC	NA	False	NA	-6	True	NA	NA	NA	100463429	100458540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100462400_100462559_100463303
Isoform_199158_3	chrX	-	1573	6	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	47.9149246060139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCCTCAGCCTCTC	NA	False	NA	-7	True	NA	NA	NA	100463436	100458541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100459013_100459366_100459545_100460514_100460582_100460892_100460937_100461878_100462559_100463303
Isoform_199159_4	chrX	-	1565	6	FSM	ENSMUSG00000031310.17	ENSMUST00000117637.8	1593	6	25	3	-7	2	multi-exon	FALSE	canonical	3	17	junction_2	47.004680617998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCCTCAGCCTCTC	NA	False	NA	-7	True	NA	NA	NA	100463422	100458541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100459013_100459366_100459545_100460514_100460588_100460892_100460937_100461878_100462559_100463303
Isoform_19916_6	chr11	+	2720	14	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	1	178	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	63.202408013447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTCCCTTCATTTAA	NA	False	NA	11	True	NA	NA	NA	29476408	29495457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_29476566_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
Isoform_199161_20	chrX	-	2069	7	FSM	ENSMUSG00000045010.15	ENSMUST00000124577.8	1190	7	-1171	292	-11	3	multi-exon	FALSE	canonical	3	11	junction_2	111.484926734016	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTTTGCAACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	100838040	100833950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100834130_100834212_100834255_100834440_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
Isoform_199162_394	chrX	-	1998	6	FSM	ENSMUSG00000045010.15	ENSMUST00000147742.9	1991	6	-11	4	-11	-4	multi-exon	FALSE	canonical	3	142	junction_5	73.271003814606	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTGTACTTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	100838040	100833957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100834130_100834212_100834255_100834844_100834891_100835166_100835250_100835786_100835944_100836542
Isoform_199165_160	chrX	-	2251	6	NIC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	117	junction_2	83.8035798758024	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838040	100833954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100834130_100834212_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
Isoform_199168_132	chrX	-	2594	5	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-12	1	intron_retention	FALSE	canonical	3	142	junction_4	69.9052930757035	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838041	100833952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100834130_100834212_100834891_100835166_100835250_100835786_100835944_100836542
Isoform_199170_32	chrX	-	2869	4	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-11	1	intron_retention	FALSE	canonical	3	142	junction_3	69.5317673201729	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838040	100833952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_100834130_100834212_100835250_100835786_100835944_100836542
Isoform_199172_597	chrX	-	4074	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	-13	1241	-13	-1241	multi-exon	FALSE	canonical	3	249	junction_1	0	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTCCATTCATTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	101200710	101186562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101190440_101200513
Isoform_199175_47	chrX	-	5318	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	-13	-3	-13	3	multi-exon	FALSE	canonical	3	249	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCGGTTTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	101200710	101185318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101190440_101200513
Isoform_199184_115	chrX	-	860	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5950.03962638532	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGCTGTTGCTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	101232929	101228545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231579_101231914_101231978_101232903
Isoform_199188_8954	chrX	-	902	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	71	2	13	-2	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	8954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232929	101228548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
Isoform_199189_669	chrX	-	978	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	-9	6	-9	-6	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTACTTTTGGTTTGCTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	101233009	101228552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
Isoform_199199_4	chrX	-	945	3	FSM	ENSMUSG00000051159.17	ENSMUST00000134887.8	607	3	-8	-330	-8	-3	multi-exon	FALSE	canonical	3	12	junction_2	97.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAACTGCCTGGGTGTGTT	NA	False	NA	-3	True	AATAAA	-17	NA	101294560	101290989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101291615_101292168_101292294_101294365
Isoform_1992_16	chr10	-	2153	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	61.0777373516734	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	368	False	NA	1	True	AATAAA	-22	NA	41685625	41594839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685568
Isoform_199202_12	chrX	-	1054	3	FSM	ENSMUSG00000051159.17	ENSMUST00000101336.10	1090	3	55	-19	55	-4	multi-exon	FALSE	canonical	3	50	junction_2	78.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAACTGCCTGGGTGTGT	NA	False	NA	-4	True	AATAAA	-16	NA	101295403	101290990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101291615_101292168_101292294_101295098
Isoform_199204_16	chrX	-	1010	3	FSM	ENSMUSG00000051159.17	ENSMUST00000101336.10	1090	3	96	-16	96	-7	multi-exon	FALSE	canonical	3	50	junction_2	78.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATAACTGCCTGGGTG	NA	False	NA	-7	True	AATAAA	-13	NA	101295362	101290993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101291615_101292168_101292294_101295098
Isoform_199206_3	chrX	-	1248	3	FSM	ENSMUSG00000051159.17	ENSMUST00000101336.10	1090	3	-137	-21	-71	-2	multi-exon	FALSE	canonical	3	50	junction_2	78.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGCCTGGGTGTGTTC	NA	False	NA	-2	True	AATAAA	-18	NA	101295595	101290988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101291615_101292168_101292294_101295098
Isoform_199208_7	chrX	-	932	3	FSM	ENSMUSG00000051159.17	ENSMUST00000050551.10	901	3	-38	7	-38	-7	multi-exon	FALSE	canonical	3	131	junction_2	38	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATAACTGCCTGGGTG	NA	False	NA	-7	True	AATAAA	-13	NA	101295825	101290993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101291615_101292168_101292294_101295639
Isoform_199209_111	chrX	-	793	3	FSM	ENSMUSG00000051159.17	ENSMUST00000050551.10	901	3	101	7	101	-7	multi-exon	FALSE	canonical	3	131	junction_2	38	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATAACTGCCTGGGTG	NA	False	NA	-7	True	AATAAA	-13	NA	101295686	101290993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101291615_101292168_101292294_101295639
Isoform_199211_53	chrX	-	1721	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	215	0	2	0	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTCCCACCGCTCTGT	NA	False	NA	-1	True	AATAAA	-15	NA	101548750	101328244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
Isoform_199213_62	chrX	-	4716	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	10	1389	10	-1389	multi-exon	FALSE	canonical	3	40	junction_24	10.1886502418132	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGTTTAAGAATTTC	NA	False	NA	-14	True	ATTAAA	-14	NA	101687842	101558969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
Isoform_199214_40	chrX	-	6115	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	-2	2	-2	-2	multi-exon	TRUE	canonical	3	40	junction_24	10.1886502418132	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTCTGGTGTTACTGCA	NA	False	NA	NA	False	AATAAA	-14	NA	101687854	101557582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
Isoform_199216_4	chrX	-	4693	32	NIC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-6	-1389	combination_of_known_splicesites	FALSE	canonical	1	6	junction_5	13.5917891600127	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGTTTAAGAATTTC	NA	False	NA	-14	True	ATTAAA	-14	NA	101687858	101558969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
Isoform_199217_5	chrX	-	518	3	FSM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	-180	-1	-180	1	multi-exon	FALSE	canonical	3	77	junction_2	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTGACTGTGTGA	3447	False	NA	NA	False	AATAAA	-17	NA	101730758	101729896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101730044_101730198_101730354_101730542
Isoform_199218_15	chrX	-	395	3	FSM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	-57	-1	-57	1	multi-exon	FALSE	canonical	3	77	junction_2	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTGACTGTGTGA	3570	False	NA	NA	False	AATAAA	-17	NA	101730635	101729896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101730044_101730198_101730354_101730542
Isoform_199219_9	chrX	-	470	3	FSM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	-127	-6	-127	6	multi-exon	FALSE	canonical	3	77	junction_2	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGACTGTGTGAAATTT	3500	False	NA	NA	False	AATAAA	-22	NA	101730705	101729891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101730044_101730198_101730354_101730542
Isoform_199220_3	chrX	+	3466	5	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	-27	8	intron_retention	FALSE	canonical	3	157	junction_3	17.5285481429581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846541	101853556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
Isoform_199222_3	chrX	-	1718	8	ISM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	2	-8	2	8	intron_retention	FALSE	canonical	0	0	junction_7	63.8378046781251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898220	101891236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101897739
Isoform_199223_38	chrX	+	1619	9	FSM	ENSMUSG00000067562.12	ENSMUST00000118218.8	1611	9	0	-8	0	8	multi-exon	FALSE	canonical	0	0	junction_2	65.1257197656963	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846568	101853556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_101846761_101846861_101847052_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
Isoform_199225_7	chrX	+	1367	8	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	62	8	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	52.0670682085782	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846630	101853556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_101846761_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
Isoform_199226_36	chrX	-	1455	8	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_7	44.1518714790442	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898220	101891236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898002
Isoform_199227_3	chrX	+	3105	6	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	50	2	intron_retention	FALSE	canonical	3	167	junction_4	12.8156154748806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCCAGGTCTTCACT	NA	False	NA	NA	False	AATAAA	-14	NA	101846618	101853550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850871_101853035
Isoform_199228_3	chrX	-	4912	4	FSM	ENSMUSG00000031325.16	ENSMUST00000127012.9	685	4	-51	-4176	-51	4176	multi-exon	FALSE	canonical	3	19	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAGTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	102355439	102269457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_102273781_102276407_102276548_102277627_102277876_102355238
Isoform_199230_79	chrX	-	7431	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	9	-1	9	1	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTTTCATCCTTG	2382	False	NA	0	True	AATAAA	-17	NA	103024881	103000767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
Isoform_199233_130	chrX	-	7419	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	9	1	9	-1	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCTTTTTCATCCT	2382	False	NA	-2	True	AATAAA	-15	NA	103024881	103000769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
Isoform_199236_8	chrX	-	7520	6	NNC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	86.0729922798087	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGCTTTTTCATCC	2382	False	NA	-3	True	AATAAA	-14	NA	103024881	103000770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103022109_103022202_103022878_103022941_103024668
Isoform_199238_12	chrX	-	7504	6	NNC	ENSMUSG00000056537.12	novel	7429	5	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	85.0858390097906	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCTTTTTCATCCT	2389	False	NA	-2	True	AATAAA	-15	NA	103024874	103000769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103022109_103022202_103022878_103022941_103024678
Isoform_199257_366	chrX	-	5649	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	16	2	16	-2	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTGTCTGGTGGAAAT	9877	False	NA	-4	True	AATAAA	-22	NA	103457436	103324264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
Isoform_199274_9	chrX	-	5505	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	0	4	0	-4	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTGTTGTGTCTTTTC	NA	False	NA	NA	False	ATTAAA	-11	NA	103714670	103580578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_199277_9	chrX	-	1560	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	18	3931	18	-3931	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAATTCAGAAGATTGC	NA	False	NA	-12	True	AATATA	-30	NA	103714652	103584505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_199282_13	chrX	-	5433	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	73	3	73	-3	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTTGTGTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	103714597	103580577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_199284_27	chrX	-	5250	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	257	2	257	-2	multi-exon	TRUE	canonical	3	93	junction_8	6.78841989185253	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTGTGTCTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	103714413	103580576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_199285_4	chrX	-	4005	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	-70	1574	-70	-1574	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGCAAACAAATGTG	NA	False	NA	NA	False	AATAAA	-20	NA	103714740	103582148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_199289_3	chrX	-	2021	8	NIC	ENSMUSG00000087174.8	novel	1887	8	NA	NA	-3	180	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	41.0867673220904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTAGTTCTTTGAGT	NA	False	NA	NA	False	AATAAA	-19	NA	104113705	104082233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104083419_104086735_104086911_104087607_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113605
Isoform_199290_21	chrX	-	866	6	FSM	ENSMUSG00000087174.8	ENSMUST00000140954.8	3287	6	16	2405	0	-3	multi-exon	FALSE	canonical	3	59	junction_2	25.9183332797462	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTGTGGATTTACAT	NA	False	NA	-6	True	AATAAA	-14	NA	104113714	104087411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113605
Isoform_199292_9	chrX	-	759	6	FSM	ENSMUSG00000087174.8	ENSMUST00000144366.8	709	6	-53	3	0	-3	multi-exon	FALSE	canonical	3	37	junction_3	33.8904116233486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTGTGGATTTACAT	NA	False	NA	-6	True	AATAAA	-14	NA	104113714	104087411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112176_104112235_104113216_104113282_104113605
Isoform_199293_13	chrX	-	770	5	FSM	ENSMUSG00000087174.8	ENSMUST00000138460.8	3732	5	10	2952	-6	-3	multi-exon	FALSE	canonical	3	29	junction_1	38.5940409908058	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTGTGGATTTACAT	NA	False	NA	-6	True	AATAAA	-14	NA	104113720	104087411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_104087718_104110364_104110484_104112069_104112235_104113216_104113282_104113605
Isoform_1993_4	chr10	-	2346	11	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-5623	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_8	73.1956282847548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	5889	False	NA	1	True	AATAAA	-22	NA	41628257	41594839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41628007
Isoform_199309_13	chrX	-	4239	11	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	98399	4	-1358	-4	3prime_fragment	FALSE	canonical	3	199	junction_10	22.4207493184327	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104874610	104841224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453
Isoform_199328_6	chrX	-	10354	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_29	49.6638527492199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTGTGCTCTTTAT	NA	False	NA	-5	True	ATTAAA	-16	NA	104972953	104841223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
Isoform_199329_4	chrX	-	10101	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_29	54.6719912746529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAATGTGTTGTGCTCTT	NA	False	NA	-8	True	ATTAAA	-13	NA	104972958	104841226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
Isoform_199330_4	chrX	-	10242	36	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	26	junction_35	54.4711569436111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTGTGCTCTTTAT	NA	False	NA	-5	True	ATTAAA	-16	NA	104972182	104841223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972093
Isoform_199331_4	chrX	-	10544	36	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	3	41	junction_35	53.1071001056606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTGTTGTGCTCTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	104972957	104841225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
Isoform_199332_5	chrX	-	10061	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_34	46.7994414097324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972183	104841220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
Isoform_199333_12	chrX	-	10358	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	69	junction_34	43.1735453408802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTGTTGTGCTCTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	104972956	104841225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
Isoform_199334_10	chrX	-	10219	35	FSM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	53	3	0	-3	multi-exon	FALSE	canonical	3	37	junction_34	46.470253163349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTGTGCTCTTTAT	NA	False	NA	-5	True	ATTAAA	-16	NA	104972956	104841223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
Isoform_199335_4	chrX	-	10269	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_33	48.0636821209802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTGTGCTCTTTAT	NA	False	NA	-5	True	ATTAAA	-16	NA	104972978	104841223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
Isoform_199337_3	chrX	-	5134	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	66.5368163424888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCTGATTGTTTTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	104972916	104895043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
Isoform_199338_7	chrX	-	4875	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	61.5256717478458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGATTGTTTTCCTTT	NA	False	NA	-6	True	AATAAA	-18	NA	104972182	104895042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
Isoform_199339_10	chrX	-	5176	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	69	junction_13	54.6632509636699	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGATTGTTTTCCTTTG	NA	False	NA	-5	True	AATAAA	-19	NA	104972953	104895041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
Isoform_199340_8	chrX	-	5033	14	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	58	53821	1	1	5prime_fragment	FALSE	canonical	3	37	junction_13	60.9118093698591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGATTGTTTTCCTTTG	NA	False	NA	-5	True	AATAAA	-19	NA	104972951	104895041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
Isoform_199341_5	chrX	-	5063	13	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	65.0664190569059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGATTGTTTTCCTTTG	NA	False	NA	-5	True	AATAAA	-19	NA	104972953	104895041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
Isoform_199344_4	chrX	-	6410	10	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	78.1595392786249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTCTTGTTGAAGCAT	NA	False	NA	-6	True	AATAAA	-11	NA	104972951	104909156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
Isoform_199345_3	chrX	-	6672	12	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	94.635272022348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTCTTGTTGAAGC	NA	False	NA	-8	True	AATAAA	-9	NA	104972957	104909158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972564
Isoform_199346_4	chrX	-	6302	11	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	26	junction_10	83.168263177729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTGTTGAAGCATTT	NA	False	NA	-4	True	AATAAA	-13	NA	104972182	104909154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972093
Isoform_199347_6	chrX	-	6604	11	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_10	80.546942834598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTGAAGCATTTAAT	NA	False	NA	-1	True	AATAAA	-16	NA	104972952	104909151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
Isoform_199348_9	chrX	-	6116	10	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_9	72.4906124190497	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTTGAAGCATTTA	NA	False	NA	-3	True	AATAAA	-14	NA	104972180	104909153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
Isoform_19935_204	chr11	+	4614	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	3	1	2	-1	multi-exon	FALSE	canonical	0	0	junction_2	355.342066711781	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29642949	29692915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
Isoform_199350_4	chrX	-	6235	10	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	93	67938	-7	-7	5prime_fragment	FALSE	canonical	3	37	junction_9	71.7696933871734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTCTTGTTGAAGC	NA	False	NA	-8	True	AATAAA	-9	NA	104972916	104909158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
Isoform_199351_6	chrX	-	6298	9	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	77.9654370538638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTTTCTTGTTGAAG	NA	False	NA	-9	True	AATAAA	-8	NA	104972952	104909159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
Isoform_199357_14	chrX	-	4027	11	FSM	ENSMUSG00000031232.18	ENSMUST00000033583.14	4115	11	85	3	-28	-3	multi-exon	FALSE	canonical	3	21	junction_1	64.6371410258839	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACATGGTTTTTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	105055420	105011692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
Isoform_19937_291	chr11	+	4589	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	28	1	27	-1	multi-exon	FALSE	canonical	0	0	junction_2	355.342066711781	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29642974	29692915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
Isoform_199375_86	chrX	-	4398	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	124	2	5	-2	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACATGGTTTTTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	105055381	105011691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
Isoform_199376_41	chrX	-	4455	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	67	2	-46	-2	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACATGGTTTTTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	105055438	105011691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
Isoform_199378_6	chrX	-	2370	7	FSM	ENSMUSG00000047242.15	ENSMUST00000055497.15	2633	7	262	1	262	-1	multi-exon	FALSE	canonical	3	7	junction_1	4.34613493680177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATTAACCTTTCATTT	NA	False	NA	NA	False	AATAAA	-11	NA	105263245	105250489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_105252264_105253312_105253424_105259732_105259803_105261702_105261838_105261915_105262053_105262501_105262584_105263184
Isoform_199379_6	chrX	-	2504	8	FSM	ENSMUSG00000047242.15	ENSMUST00000113495.9	2512	8	9	-1	9	1	multi-exon	FALSE	canonical	2	3	junction_7	5.73211504221111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTAACCTTTCATTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	105264755	105250487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_105252264_105253312_105253424_105259732_105259803_105261702_105261838_105261915_105262053_105262501_105262584_105263184_105263305_105264682
Isoform_199380_107	chrX	-	1632	6	FSM	ENSMUSG00000031239.6	ENSMUST00000033591.6	1744	6	16	96	16	-96	multi-exon	FALSE	canonical	3	44	junction_1	8.06473806146238	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATTTTCATCACTTG	NA	False	NA	NA	False	AATAAA	-19	NA	106446966	106440800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_106441586_106441701_106441853_106442376_106442488_106442701_106442900_106443172_106443305_106446711
Isoform_199382_4	chrX	-	4865	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	9	968	9	-968	multi-exon	FALSE	canonical	3	41	junction_6	7.21958786771044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTGTAATAAGCTTTG	NA	False	NA	NA	False	NA	NA	NA	106859931	106827324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
Isoform_199385_18	chrX	-	1191	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	59	4592	59	494	multi-exon	FALSE	canonical	3	41	junction_6	7.21958786771044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTCGCATAACCCAGA	NA	False	NA	NA	False	AATAAA	-23	NA	106859881	106830948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
Isoform_199386_5	chrX	-	4331	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	59	1452	59	-1452	multi-exon	FALSE	canonical	3	41	junction_6	7.21958786771044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAACTCCTACTATTT	NA	False	NA	NA	False	NA	NA	NA	106859881	106827808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
Isoform_199387_5	chrX	-	5771	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	61	10	61	-10	multi-exon	TRUE	canonical	3	41	junction_6	7.21958786771044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGAAATTGGCTGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	106859879	106826366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
Isoform_199392_128	chrX	-	1869	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	57	8	57	-8	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATTATGGTTTGCA	NA	False	NA	-7	True	AATAAA	-11	NA	108056953	108048147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
Isoform_199394_17	chrX	-	2019	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	-92	7	-92	-7	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATTATGGTTTGCAA	NA	False	NA	-6	True	AATAAA	-12	NA	108057102	108048146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
Isoform_199401_149	chrX	-	4071	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	59	5	-31	-5	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATCATTTAGTCTTGG	NA	False	NA	-12	True	ATTAAA	-25	NA	110372833	110297894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
Isoform_199402_10	chrX	-	4071	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	-4	68	-4	-68	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGGTGTCTTTTTTAAA	NA	False	NA	-75	True	TATAAA	-14	NA	110372896	110297957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
Isoform_199411_53	chrX	-	4259	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-40	-7	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATCATTTAGTCTT	NA	False	NA	-14	True	ATTAAA	-23	NA	110373192	110297896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
Isoform_199421_262	chrX	-	4085	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	66	0	-24	0	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110372826	110297888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
Isoform_199422_24	chrX	-	3725	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	31	395	31	-394	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTGTGTAATGTGTAT	NA	False	NA	NA	False	AATAAA	-36	NA	110372861	110298283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
Isoform_199426_15	chrX	-	4173	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	-28	6	-28	-5	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATCATTTAGTCTTGG	NA	False	NA	-12	True	ATTAAA	-25	NA	110372920	110297894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
Isoform_199429_10	chrX	-	4140	24	NIC	ENSMUSG00000025665.17	novel	4151	23	NA	NA	99	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_23	77.9498166325199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110373053	110297888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372796_110372967
Isoform_199432_79	chrX	-	4292	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110373202	110297888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
Isoform_19944_22	chr11	+	2229	8	FSM	ENSMUSG00000020458.17	ENSMUST00000102842.10	2257	8	28	0	27	0	multi-exon	FALSE	canonical	0	0	junction_2	364.665796116311	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642974	29692916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29643694_29655534_29655592_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
Isoform_199440_3	chrX	-	2408	10	FSM	ENSMUSG00000034551.13	ENSMUST00000113422.9	9534	10	-42	7168	-42	-7166	multi-exon	FALSE	canonical	1	1	junction_9	3.2659863237109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTGAAATGGTTTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	110606818	110486795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_110487096_110492491_110492615_110498891_110498976_110502657_110502738_110510314_110510523_110531997_110532145_110559533_110559588_110569330_110570441_110581039_110581187_110606663
Isoform_199441_3	chrX	-	2762	9	FSM	ENSMUSG00000034551.13	ENSMUST00000038472.7	9385	9	-40	6663	-40	-6663	multi-exon	FALSE	canonical	1	2	junction_8	2.9474565306379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACACTTTTAATCTC	NA	False	NA	NA	False	CATAAA	-13	NA	110606816	110486292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_110487096_110492491_110492615_110498891_110498976_110502657_110502738_110510314_110510523_110531997_110532145_110559533_110559588_110569330_110570441_110606663
Isoform_199443_4	chrX	-	3967	17	FSM	ENSMUSG00000034607.7	ENSMUST00000039887.4	3886	17	-77	-4	-77	4	multi-exon	FALSE	canonical	1	1	junction_16	3.09989919190931	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTCTTTGTGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	111608425	111548123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_111550139_111552674_111552790_111554029_111554113_111554943_111555073_111556408_111556529_111556815_111556969_111557756_111557871_111558714_111558808_111565785_111565861_111567148_111567177_111571447_111571579_111573845_111574020_111578730_111578833_111587067_111587149_111593090_111593166_111607866_111608205_111608284
Isoform_19945_444	chr11	+	2200	7	FSM	ENSMUSG00000020458.17	ENSMUST00000078830.11	3615	7	0	1415	0	0	multi-exon	FALSE	canonical	3	504	junction_1	153.756029692063	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642946	29692916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29643694_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
Isoform_199451_331	chrX	-	4871	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	6	-9	-2	9	multi-exon	TRUE	canonical	3	145	junction_7	16.3001189428489	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTATTTTTTTATAT	NA	False	NA	0	True	AATAAA	-25	NA	112095208	111950280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
Isoform_199455_9	chrX	-	4665	13	NIC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_11	50.7304286290673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTAATGGCTTATTT	NA	False	NA	-8	True	AATAAA	-17	NA	112095208	111950288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112069200_112069268_112095137
Isoform_199456_3	chrX	-	4281	6	NIC	ENSMUSG00000051323.17	novel	10289	6	NA	NA	-482	-4744	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	6.04648658313239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGCAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132588495	132488372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132582840_132582982_132585866
Isoform_199457_9	chrX	-	4160	5	FSM	ENSMUSG00000051323.17	ENSMUST00000167944.8	8407	5	-502	4749	-502	-4744	multi-exon	FALSE	canonical	3	12	junction_2	5.78791845139511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGCAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132588515	132488372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132585866
Isoform_199458_3	chrX	-	4143	5	FSM	ENSMUSG00000051323.17	ENSMUST00000060309.10	7035	5	-1853	4745	-482	-4744	multi-exon	FALSE	canonical	3	7	junction_2	7.29297607290741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGCAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132588495	132488372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_132489327_132526017_132526191_132533643_132533703_132581829_132582158_132585866
Isoform_19946_535	chr11	+	2165	7	FSM	ENSMUSG00000020458.17	ENSMUST00000078830.11	3615	7	35	1415	34	0	multi-exon	FALSE	canonical	3	504	junction_1	153.756029692063	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642981	29692916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29643694_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
Isoform_199460_18	chrX	-	1737	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	25	3	25	-3	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATCGTTTTAATTTTT	NA	False	NA	1	True	AATAAA	-39	NA	132799153	132791819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
Isoform_199462_26	chrX	-	1683	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	78	4	-57	-4	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATCGTTTTAATTTT	NA	False	NA	0	True	AATAAA	-38	NA	132799100	132791820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
Isoform_199464_13	chrX	-	3147	14	FSM	ENSMUSG00000067369.13	ENSMUST00000113252.8	3128	14	-15	-4	-8	0	multi-exon	TRUE	canonical	1	5	junction_12	15.8476474277441	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTATCTCTAGTCCAT	NA	False	NA	-6	True	AATAAA	-22	NA	133177684	133123844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133171258_133171335_133177594
Isoform_199465_40	chrX	-	3070	13	FSM	ENSMUSG00000067369.13	ENSMUST00000087541.12	3119	13	47	2	-8	-1	multi-exon	FALSE	canonical	1	13	junction_4	11.7686022959398	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTATCTCTAGTCCA	NA	False	NA	-7	True	AATAAA	-21	NA	133177684	133123845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
Isoform_199467_6	chrX	-	922	5	ISM	ENSMUSG00000067369.13	ENSMUST00000145066.2	3237	12	-17	39387	-17	5	5prime_fragment	FALSE	canonical	3	42	junction_1	5.7227615711298	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCCGCATTGTCAT	NA	False	NA	-2	True	AGTAAA	-19	NA	133177693	133163231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
Isoform_199468_7	chrX	-	1737	4	NIC	ENSMUSG00000067369.13	novel	4099	12	NA	NA	3	5	intron_retention	FALSE	canonical	3	48	junction_1	4.32049379893857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCCGCATTGTCAT	NA	False	NA	-2	True	AGTAAA	-19	NA	133177666	133163231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_133164611_133167009_133167065_133168079_133168311_133177594
Isoform_199469_7	chrX	-	1776	4	NIC	ENSMUSG00000067369.13	novel	4099	12	NA	NA	26	5	intron_retention	FALSE	canonical	3	48	junction_1	4.32049379893857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCCGCATTGTCAT	NA	False	NA	-2	True	AGTAAA	-19	NA	133177705	133163231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_133164611_133167009_133167065_133168079_133168311_133177594
Isoform_199470_14	chrX	-	1971	13	FSM	ENSMUSG00000009596.10	ENSMUST00000009740.9	1933	13	-38	0	-38	0	multi-exon	FALSE	canonical	3	9	junction_2	4.16999866773227	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGTCTCTAATTTCT	NA	False	NA	NA	False	NA	NA	NA	133377277	133360866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371128_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
Isoform_199471_3	chrX	-	1820	13	NIC	ENSMUSG00000009596.10	novel	1933	13	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	5.1010619809343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACGTCTCTAATTTC	NA	False	NA	NA	False	NA	NA	NA	133377235	133360867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371236_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
Isoform_199472_605	chrX	-	1195	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	225	1	225	-1	multi-exon	FALSE	canonical	3	1175	junction_1	0	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGACGAAGAGGCTT	NA	False	NA	-11	True	AATAAA	-15	NA	133442389	133438005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133439017_133442205
Isoform_199484_58	chrX	-	1413	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	7	1	7	-1	multi-exon	FALSE	canonical	3	1175	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGACGAAGAGGCTT	NA	False	NA	-11	True	AATAAA	-15	NA	133442607	133438005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133439017_133442205
Isoform_199492_6	chrX	-	2539	19	FSM	ENSMUSG00000031264.14	ENSMUST00000033617.13	2540	19	2	-1	2	1	multi-exon	FALSE	canonical	1	1	junction_10	2.60104442460436	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTTTAATTTATTACA	NA	False	NA	NA	False	AATAAA	-17	NA	133483887	133443083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133443557_133446230_133446389_133447460_133447580_133448310_133448376_133450163_133450381_133451055_133451228_133451950_133452026_133455147_133455276_133455437_133455518_133456297_133456353_133457086_133457150_133457536_133457725_133459435_133459504_133459946_133460076_133466345_133466428_133469653_133469723_133473957_133474057_133474665_133474837_133483759
Isoform_199493_103	chrX	-	1381	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	53	1581	53	-1581	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCTTTTCAACATAG	NA	False	NA	-18	True	AATAAA	-24	NA	133501701	133490515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
Isoform_199494_48	chrX	-	1440	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	-6	1581	-6	-1581	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCTTTTCAACATAG	NA	False	NA	-18	True	AATAAA	-24	NA	133501760	133490515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
Isoform_199497_14	chrX	-	3026	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	5	-16	5	16	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTCTCTACACTGC	NA	False	NA	NA	False	NA	NA	NA	133501749	133488918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
Isoform_199498_28	chrX	-	2980	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	53	-18	53	18	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTCTCTACACTGCGT	NA	False	NA	NA	False	NA	NA	NA	133501701	133488916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
Isoform_1995_14	chr10	-	2281	12	FSM	ENSMUSG00000019813.17	ENSMUST00000186239.7	2255	12	-29	3	-12	2	multi-exon	FALSE	canonical	3	7	junction_11	75.4430440303278	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	355	False	NA	1	True	AATAAA	-22	NA	41685638	41594839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
Isoform_199501_65	chrX	-	3440	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	227	-1	2	-1	multi-exon	FALSE	canonical	3	17	junction_5	6.60302960768767	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTTCTGGTGCTTT	NA	False	NA	-2	True	AATAAA	-20	NA	133709743	133704894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
Isoform_199502_22	chrX	-	2373	22	FSM	ENSMUSG00000009941.11	ENSMUST00000113189.8	2375	22	2	0	2	0	multi-exon	TRUE	canonical	3	15	junction_3	7.21770310384392	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATGTCTTGAAGTGCT	NA	False	NA	-2	True	AATAAA	-18	NA	133865501	133845276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133845538_133845640_133845702_133850435_133850616_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
Isoform_199503_29	chrX	-	2356	22	FSM	ENSMUSG00000009941.11	ENSMUST00000010085.4	2393	22	36	1	36	-1	multi-exon	FALSE	canonical	3	19	junction_3	6.66632652193486	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTATGTCTTGAAGTGC	NA	False	NA	-3	True	AATAAA	-17	NA	133865467	133845277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133845538_133845640_133845702_133850435_133850634_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
Isoform_199504_4	chrX	-	3512	7	FSM	ENSMUSG00000052676.17	ENSMUST00000064659.6	3501	7	-10	-1	-10	1	multi-exon	FALSE	canonical	0	0	junction_4	2.08166599946613	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGCTTTGTGATCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	133909968	133872122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_133874776_133878396_133878497_133891312_133891379_133892883_133893059_133893145_133893248_133894287_133894395_133909659
Isoform_199505_10	chrX	-	3772	8	NIC	ENSMUSG00000085556.2	novel	636	6	NA	NA	1	4775	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	7.74069553379661	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCCGTTTCTTTGA	1135	False	NA	NA	False	AATAAA	-19	NA	134053344	134018851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_134021224_134022418_134023001_134023443_134023744_134044969_134045069_134048327_134048426_134050176_134050266_134051692_134051783_134053202
Isoform_199506_3	chrX	-	3668	7	NIC	ENSMUSG00000085556.2	novel	636	6	NA	NA	3	4771	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	7.80313327381308	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACATTATCCGTTTCT	1137	False	NA	NA	False	AATAAA	-15	NA	134053342	134018855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_134021224_134022418_134023001_134023443_134023744_134044969_134045069_134050176_134050266_134051692_134051783_134053202
Isoform_199507_74	chrX	-	3829	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	30	-161	30	161	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078351	134068211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
Isoform_199509_3	chrX	-	3710	4	NIC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	30	161	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	101.004950373732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078351	134068211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_134070935_134071511_134072097_134073399_134073700_134078249
Isoform_199510_7	chrX	-	2206	22	NIC	ENSMUSG00000031410.15	novel	2233	23	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	1.0190921218587	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGGATTCTTCTTTGC	NA	False	NA	NA	False	AATAAA	-18	NA	134499529	134480303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_134480575_134480703_134480765_134483832_134484016_134484471_134484539_134485101_134485145_134485235_134485352_134485452_134485512_134485645_134485754_134485889_134485946_134486029_134486099_134486514_134486552_134487985_134488096_134488266_134488375_134488481_134488571_134488715_134488786_134488930_134489012_134489121_134489227_134489324_134489409_134489679_134489831_134490065_134490220_134494561_134494643_134499426
Isoform_199511_8	chrX	-	498	5	FSM	ENSMUSG00000060726.11	ENSMUST00000113154.8	544	5	39	7	39	-7	multi-exon	FALSE	canonical	3	7	junction_4	4.9180788932265	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGGTTTTGGGCTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	134625971	134619422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_134619503_134620414_134620520_134621315_134621402_134624106_134624186_134625823
Isoform_199513_644	chrX	-	819	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	82	2	82	-2	multi-exon	FALSE	canonical	3	901	junction_2	34	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTAGTTCTTTAAA	4238	False	NA	-2	True	AATAAA	-16	NA	134968903	134967314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_134967957_134968348_134968422_134968799
Isoform_199515_31	chrX	-	853	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	48	2	48	-2	multi-exon	FALSE	canonical	3	901	junction_2	34	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTAGTTCTTTAAA	4204	False	NA	-2	True	AATAAA	-16	NA	134968937	134967314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_134967957_134968348_134968422_134968799
Isoform_199517_7	chrX	-	3025	20	NIC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	18.5366299040426	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGAACATTTGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	134985991	134972857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
Isoform_199519_3	chrX	-	3108	19	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_18	14.516168082606	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985985	134972851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
Isoform_199520_36	chrX	-	3055	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_19	15.6232999075099	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAACATTTGTGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	134985977	134972855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
Isoform_199521_9	chrX	-	3063	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_20	18.3888553205467	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAACATTTGTGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	134985982	134972855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982185_134985845
Isoform_199522_11	chrX	-	2993	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_19	14.4216288782296	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	False	NA	NA	False	AATAAA	-25	NA	134985977	134972847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
Isoform_199523_11	chrX	-	2978	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_19	16.3524206785987	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAACATTTGTGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	134985977	134972855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981866_134985845
Isoform_199529_246	chrX	-	1078	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	172	0	31	0	multi-exon	FALSE	canonical	3	703	junction_2	29	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTTAAGACTTGGTC	NA	False	NA	NA	False	NA	NA	NA	135072919	135070829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135071799_135072384_135072455_135072880
Isoform_199530_163	chrX	-	1143	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	105	2	14	-2	multi-exon	FALSE	canonical	3	703	junction_2	29	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTTGGTTAAGACTTGG	NA	False	NA	NA	False	NA	NA	NA	135072986	135070831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135071799_135072384_135072455_135072880
Isoform_199539_2816	chrX	-	810	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	56	0	-14	0	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	2816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116206	135114720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135115333_135115652_135115730_135116085
Isoform_199541_153	chrX	-	856	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	10	0	10	0	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116252	135114720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135115333_135115652_135115730_135116085
Isoform_199544_43	chrX	-	769	3	FSM	ENSMUSG00000050071.9	ENSMUST00000113118.2	754	3	26	-41	-15	0	multi-exon	FALSE	canonical	3	367	junction_1	2702.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116207	135114720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135115333_135115694_135115730_135116085
Isoform_199554_4128	chrX	-	1781	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	74	4	-2	-4	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	4128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAAAAAAAAATGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	135642027	135633705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
Isoform_199555_116	chrX	-	1835	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	24	0	21	0	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642077	135633701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
Isoform_199558_89	chrX	-	1807	4	FSM	ENSMUSG00000031422.17	ENSMUST00000033797.13	1996	4	178	11	-131	0	multi-exon	FALSE	canonical	3	68	junction_3	1439.93989072075	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642232	135633701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135642141
Isoform_199566_47	chrX	-	431	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	19	0	19	0	multi-exon	FALSE	canonical	3	182	junction_2	19	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135858755	135856013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135856232_135857483_135857589_135858647
Isoform_199567_9	chrX	-	528	4	FSM	ENSMUSG00000072955.15	ENSMUST00000127404.8	816	4	8	280	8	-280	multi-exon	FALSE	canonical	3	70	junction_2	61.5918465022405	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGTGTGTAACTTCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	135877610	135856016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135856232_135857483_135857589_135876146_135876252_135877507
Isoform_199568_20	chrX	-	433	3	FSM	ENSMUSG00000089768.3	ENSMUST00000113071.2	439	3	6	0	6	0	multi-exon	FALSE	canonical	3	31	junction_1	50	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135877617	135874770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_135874989_135876146_135876252_135877507
Isoform_199569_4	chrX	-	3157	6	NIC	ENSMUSG00000044348.15	novel	3440	7	NA	NA	0	-267	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	11.7813411800185	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTTGTACTAAGTATC	NA	False	NA	NA	False	NA	NA	NA	135939051	135902070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135933099_135933250_135938914
Isoform_199570_5	chrX	-	1695	6	NIC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	11.7813411800185	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGATTATCCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	135939049	135903530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135933099_135933250_135938914
Isoform_199571_28	chrX	-	1332	4	FSM	ENSMUSG00000023443.14	ENSMUST00000113066.9	1692	4	359	1	359	-1	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGCTTTGAGAGTTAT	NA	False	NA	-2	True	AATAAA	-17	NA	136020561	136016146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319
Isoform_199572_3	chrX	-	1649	4	FSM	ENSMUSG00000023443.14	ENSMUST00000113066.9	1692	4	40	3	40	-3	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATTGGCTTTGAGAGTT	NA	False	NA	-4	True	AATAAA	-15	NA	136020880	136016148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319
Isoform_199576_31	chrX	-	3831	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.4437485471873	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGGCTTGAATTTGGGTG	NA	False	NA	-10	True	AATAAA	-19	NA	138772393	138722650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_138723578_138723878_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
Isoform_199577_10	chrX	-	4031	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.4437485471873	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTTCCATGGTGTTTT	NA	False	NA	0	True	AGTAAA	-22	NA	138772395	138722452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_138723578_138723878_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
Isoform_199579_10	chrX	-	4005	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.4437485471873	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTTCCATGGTGTTTT	NA	False	NA	0	True	AGTAAA	-22	NA	138772369	138722452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_138723578_138723878_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
Isoform_199582_3	chrX	-	3792	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	16.0058583025091	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTAGGCTTGAATTTGG	NA	False	NA	-13	True	AATAAA	-16	NA	138772395	138722653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_138723578_138723916_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
Isoform_199583_6	chrX	-	4171	16	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_6	13.1121656826357	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTAGGCTTGAATTTGGG	NA	False	NA	-12	True	AATAAA	-17	NA	138772434	138722652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
Isoform_199587_9	chrX	-	4329	16	NNC	ENSMUSG00000031434.16	novel	4412	16	NA	NA	10	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	13.1121656826357	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGTTCCATGGTGTTT	NA	False	NA	-1	True	AGTAAA	-21	NA	138772393	138722453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
Isoform_199591_31	chrX	-	5483	7	FSM	ENSMUSG00000031433.16	ENSMUST00000033810.8	2787	7	7	-2703	-2	1840	multi-exon	TRUE	canonical	3	17	junction_1	6.26276474268531	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGAGATTTGGAAAGAGA	NA	False	NA	NA	False	AATAAA	-16	NA	138899293	138842281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_138846653_138855655_138855804_138868944_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138899248
Isoform_199595_11	chrX	-	1922	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	170.821864452417	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963078	138907553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138962996
Isoform_199596_113	chrX	-	1995	9	FSM	ENSMUSG00000072944.12	ENSMUST00000101212.9	1996	9	2	-1	2	1	multi-exon	FALSE	canonical	3	147	junction_8	135.330151850946	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGAACTGGGTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	138963315	138907552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963161
Isoform_199599_324	chrX	-	1875	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTGAACTGGGTTTTT	NA	False	NA	-7	True	AATAAA	-18	NA	138963340	138907551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
Isoform_1996_176	chr10	-	2200	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	-22	-1	1	1	multi-exon	FALSE	canonical	3	114	junction_4	38.3583107031579	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	368	False	NA	0	True	AATAAA	-21	NA	41685625	41594840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
Isoform_199600_19	chrX	-	2031	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-36	1	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGAACTGGGTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	138963497	138907552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
Isoform_199602_8	chrX	-	1725	8	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	199.257704124737	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGAACTGGGTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	138963326	138907552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
Isoform_199604_52	chrX	-	1774	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	8	8	8	1	multi-exon	FALSE	canonical	3	51	junction_2	112.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139443409	139440284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_139441857_139442853_139442906_139443259
Isoform_199605_14	chrX	-	1824	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	-42	8	-42	1	multi-exon	FALSE	canonical	3	51	junction_2	112.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139443459	139440284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_139441857_139442853_139442906_139443259
Isoform_199607_189	chrX	-	1963	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	3	8	3	1	multi-exon	FALSE	canonical	3	154	junction_2	61	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139443933	139440284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_139441857_139442853_139442906_139443594
Isoform_199613_19	chrX	-	2127	4	FSM	ENSMUSG00000031431.14	ENSMUST00000112996.9	1552	4	151	-726	151	1	multi-exon	FALSE	canonical	2	4	junction_3	117.12196871448	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139501257	139440284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_139441857_139442853_139442906_139498876_139499308_139501185
Isoform_199614_62	chrX	-	2137	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1178	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	110.816164083685	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139500230	139440284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500148
Isoform_199616_13	chrX	-	2151	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1251	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	116.190456674471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139500157	139440284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500061
Isoform_199617_12	chrX	-	2224	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1178	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	116.190456674471	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139500230	139440284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500061
Isoform_199619_17	chrX	-	2289	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1509	1	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_3	116.499880782009	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139499899	139440284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139499665
Isoform_199621_3	chrX	-	4595	4	NNC	ENSMUSG00000042386.8	novel	2116	4	NA	NA	-63	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTTTGAAAAGGCTAG	260	False	NA	NA	False	NA	NA	NA	139714245	139709060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_139710457_139710749_139713214_139713261_139713872_139714120
Isoform_199623_233	chrX	-	1432	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	0	-2	0	2	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCAATTTCTCATTCAA	NA	False	NA	-6	True	AATAAA	-13	NA	139857438	139849175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
Isoform_199630_33	chrX	-	1348	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	39	3	0	-3	multi-exon	FALSE	canonical	3	80	junction_1	228.562218006389	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCTCCCAATTTCTCA	NA	False	NA	-11	True	AATAAA	-8	NA	139857438	139849180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
Isoform_199634_9	chrX	-	4954	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112903.8	4956	16	1	1	1	-1	multi-exon	FALSE	canonical	1	1	junction_14	45.3617557959223	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTTTGTTTTTTCTTA	NA	False	NA	-4	True	AATAAA	-17	NA	141173499	141100989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134612_141143382_141143433_141173300
Isoform_199638_40	chrX	-	4957	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	1	1	1	-1	multi-exon	FALSE	canonical	3	35	junction_14	37.5140862432589	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTTTGTTTTTTCTTA	NA	False	NA	-4	True	AATAAA	-17	NA	141173499	141100989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
Isoform_199641_231	chrX	-	5246	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	32	2	1	-2	multi-exon	FALSE	canonical	3	129	junction_14	18.9168942717585	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCAGTTTGTTTTTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	141173499	141100990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
Isoform_199645_4	chrX	-	5342	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	-62	0	-62	0	multi-exon	TRUE	canonical	3	129	junction_14	18.9168942717585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141173593	141100988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
Isoform_199651_28	chrX	-	5455	6	FSM	ENSMUSG00000042225.4	ENSMUST00000041317.3	5437	6	-23	5	-23	-5	multi-exon	FALSE	canonical	3	79	junction_1	6.04648658313239	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATCTTTGTTTTAGATT	NA	False	NA	NA	False	AATAAA	-10	NA	141749747	141634146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
Isoform_199654_3	chrX	-	5319	5	NIC	ENSMUSG00000042225.4	novel	5437	6	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	38.5810834477209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATCTTTGTTTTAGATT	NA	False	NA	NA	False	AATAAA	-10	NA	141749722	141634146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141749203
Isoform_199656_20	chrX	-	3521	13	FSM	ENSMUSG00000067276.6	ENSMUST00000087316.6	3561	13	35	5	35	-5	multi-exon	FALSE	canonical	3	10	junction_3	5.06348584365444	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCAGTCTTGACTAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	142610375	142585231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_142586823_142587352_142587490_142587670_142587793_142588390_142588594_142588758_142588882_142590241_142590429_142590522_142590601_142590836_142591031_142591613_142591807_142592290_142592500_142593840_142593973_142603291_142603473_142610204
Isoform_199657_11	chrX	-	1305	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	6	5	2	1	multi-exon	FALSE	canonical	3	95	junction_2	83.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATATCTGACTTGAGAG	NA	False	NA	NA	False	GATAAA	-16	NA	149242144	149191578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149192597_149203337_149203438_149241957
Isoform_199659_18	chrX	-	575	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	4	737	0	-144	multi-exon	FALSE	canonical	3	95	junction_2	83.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTCTTGGCTTTTGTT	NA	False	NA	NA	False	TATAAA	-20	NA	149242146	149192310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149192597_149203337_149203438_149241957
Isoform_199661_28	chrX	-	465	3	FSM	ENSMUSG00000041353.13	ENSMUST00000151067.8	864	3	4	395	0	-144	multi-exon	FALSE	canonical	0	0	junction_2	131	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTCTTGGCTTTTGTT	NA	False	NA	NA	False	TATAAA	-20	NA	149242146	149192310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149192597_149203337_149203438_149242067
Isoform_199662_10	chrX	-	3330	6	ISM	ENSMUSG00000025269.17	ENSMUST00000112725.8	3613	7	1686	80	-9	-80	3prime_fragment	FALSE	canonical	3	13	junction_1	30.3539124331609	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTCTATAATTTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	149371154	149302594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_149305207_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
Isoform_199663_3	chrX	-	1910	6	FSM	ENSMUSG00000025269.17	ENSMUST00000140207.8	795	6	-73	-1042	5	0	multi-exon	FALSE	canonical	1	1	junction_5	34.2963554915096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGTTGAGTGGATATT	NA	False	NA	-3	True	AATAAA	-22	NA	149371140	149354502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370888
Isoform_199664_154	chrX	-	1876	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	9	-1	9	0	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGTTGAGTGGATATT	NA	False	NA	-3	True	AATAAA	-22	NA	149371136	149354502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
Isoform_199665_21	chrX	-	1923	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	-36	-3	-36	2	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGAGTGGATATTTT	NA	False	NA	-1	True	AATAAA	-24	NA	149371181	149354500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
Isoform_199667_20	chrX	-	2220	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	-333	-3	-333	2	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGAGTGGATATTTT	NA	False	NA	-1	True	AATAAA	-24	NA	149371478	149354500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
Isoform_199669_3	chrX	-	2876	5	NIC	ENSMUSG00000025269.17	novel	1884	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	78	junction_1	3.67423461417477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGTTGAGTGGATATT	NA	False	NA	-3	True	AATAAA	-22	NA	149371139	149354502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149370123_149370918
Isoform_199670_4	chrX	-	6656	13	NIC	ENSMUSG00000025272.17	novel	6610	13	NA	NA	2	-2	intron_retention	FALSE	canonical	1	1	junction_12	7.62488615579858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTATTCTGTCCTTTA	NA	False	NA	-19	True	ATTAAA	-16	NA	149440393	149428301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_149428518_149428689_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440253
Isoform_199671_10	chrX	-	6571	13	FSM	ENSMUSG00000025272.17	ENSMUST00000112709.8	6610	13	39	0	2	0	multi-exon	FALSE	canonical	3	18	junction_12	3.93964888452427	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTATTCTGTCCTTTAAT	NA	False	NA	-17	True	ATTAAA	-18	NA	149440393	149428299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149428518_149428689_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440340
Isoform_199674_175	chrX	-	2214	12	ISM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	771	0	22	0	3prime_fragment	FALSE	canonical	3	154	junction_9	18.0545546095372	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149595932	149589416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
Isoform_199676_75	chrX	-	2152	13	NIC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	35	junction_12	45.1259810604342	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149595953	149589416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149595816
Isoform_199678_6	chrX	-	2095	13	NIC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_12	53.9265833229669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149596148	149589416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596068
Isoform_199679_153	chrX	-	2088	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	19	0	19	0	multi-exon	FALSE	canonical	3	63	junction_12	38.0929965858409	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149596684	149589416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
Isoform_199680_54	chrX	-	2073	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112699.9	2183	13	59	51	-5	0	multi-exon	FALSE	canonical	3	26	junction_12	47.4332864839309	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149597282	149589416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149597224
Isoform_1997_17	chr10	-	2337	12	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	60.5360353033458	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	108	False	NA	1	True	AATAAA	-22	NA	41685885	41594839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568_41685660_41685783
Isoform_199701_419	chrX	-	4801	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	61	7	61	-7	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149800257	149766143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
Isoform_199706_10	chrX	-	4866	16	NIC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	58	-6	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	140.096062281089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTTGTGTGAGACTG	NA	False	NA	-22	True	NA	NA	NA	149800260	149766142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797147_149800196
Isoform_199715_47	chrX	-	3771	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	25	0	5	0	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCATTTTCCTTGTTTCA	NA	False	NA	-1	True	AAAAAG	-18	NA	149879514	149870089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
Isoform_199720_10	chrX	-	3680	4	FSM	ENSMUSG00000025264.13	ENSMUST00000166010.2	1318	4	25	-2387	5	0	multi-exon	FALSE	canonical	3	44	junction_3	140.42158745087	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCATTTTCCTTGTTTCA	NA	False	NA	-1	True	AAAAAG	-18	NA	149879514	149870089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879424
Isoform_199722_13	chrX	-	1547	8	NIC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	33.0126753640761	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGTCGTAAGAGTAC	NA	False	NA	-1	True	AATAAA	-18	NA	150799290	150787576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799119
Isoform_199723_94	chrX	-	1499	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	10	-1	10	1	multi-exon	FALSE	canonical	3	80	junction_7	14.6816559150582	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGTCGTAAGAGTAC	NA	False	NA	-1	True	AATAAA	-18	NA	150799281	150787576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
Isoform_199724_8	chrX	-	1543	8	NNC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	-591	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	35.5969501101268	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGTCGTAAGAGTAC	NA	False	NA	-1	True	AATAAA	-18	NA	150799882	150787576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799715
Isoform_199726_17	chrX	-	4316	4	FSM	ENSMUSG00000087403.10	ENSMUST00000181635.8	398	4	-5	-3913	2	12	multi-exon	FALSE	canonical	3	22	junction_1	27.8128667266709	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCCTTTTTTAATATG	NA	False	NA	NA	False	NA	NA	NA	151110464	151077811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151081871_151103205_151103281_151110156_151110236_151110361
Isoform_199727_8	chrX	-	4264	4	NIC	ENSMUSG00000087403.10	novel	398	4	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	2.82842712474619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTGACTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	151110464	151077819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_151081871_151103205_151103281_151110156_151110236_151110405
Isoform_199728_109	chrX	-	4231	3	FSM	ENSMUSG00000087403.10	ENSMUST00000148326.8	584	3	27	-3674	2	2	multi-exon	FALSE	canonical	3	54	junction_1	13.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTGTGACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	151110464	151077821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151081871_151110156_151110236_151110361
Isoform_199729_33	chrX	-	4187	3	FSM	ENSMUSG00000087403.10	ENSMUST00000195280.3	4212	3	27	-2	2	2	multi-exon	FALSE	canonical	3	16	junction_2	19	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTGTGACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	151110464	151077821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151081871_151110156_151110236_151110405
Isoform_199731_3	chrX	-	464	4	FSM	ENSMUSG00000087403.10	ENSMUST00000141922.8	367	4	0	-97	0	1	multi-exon	FALSE	canonical	1	2	junction_1	33.5360502544153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-36	NA	151110466	151098210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151098416_151103205_151103281_151110156_151110236_151110361
Isoform_199732_4	chrX	-	389	3	NIC	ENSMUSG00000087403.10	novel	367	4	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	40	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-36	NA	151110466	151098210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_151098416_151110156_151110236_151110361
Isoform_199733_316	chrX	-	2709	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	-15	2	-15	-2	multi-exon	FALSE	canonical	3	155	junction_2	16.4189930669738	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTCTTGGAGTCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	151125436	151119852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
Isoform_199735_6	chrX	-	2866	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	-173	3	-173	-3	multi-exon	FALSE	canonical	3	155	junction_2	16.4189930669738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125594	151119853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
Isoform_199736_22	chrX	-	2721	7	NIC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-15	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	69.392602871872	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125436	151119853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123390_151124535
Isoform_199737_5	chrX	-	2814	6	FSM	ENSMUSG00000041096.14	ENSMUST00000149685.8	2804	6	-15	5	-15	-2	multi-exon	FALSE	canonical	3	155	junction_2	17.9844377170931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTCTTGGAGTCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	151125436	151119852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123377_151124535
Isoform_199738_9	chrX	-	2828	6	NIC	ENSMUSG00000041096.14	novel	2804	6	NA	NA	-17	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	74.6763684173246	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125438	151119853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123390_151124535
Isoform_19974_19	chr11	+	1609	7	FSM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	164	0	164	0	multi-exon	FALSE	canonical	3	50	junction_1	322.410409605866	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29668726	29692916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_29668883_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
Isoform_199740_63	chrX	-	2713	7	NIC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	44	junction_2	53.7339123211155	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125438	151119853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_151120562_151121720_151122392_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
Isoform_199744_3	chrX	-	1081	3	FSM	ENSMUSG00000056679.14	ENSMUST00000137840.2	998	3	-88	5	-88	-5	multi-exon	FALSE	canonical	2	6	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTATCTGTGTTTATA	NA	False	NA	NA	False	NA	NA	NA	151151788	151150016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151150266_151150416_151150507_151151046
Isoform_199745_5	chrX	-	1015	3	FSM	ENSMUSG00000056679.14	ENSMUST00000137840.2	998	3	-22	5	-22	-5	multi-exon	FALSE	canonical	2	6	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTATCTGTGTTTATA	NA	False	NA	NA	False	NA	NA	NA	151151722	151150016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151150266_151150416_151150507_151151046
Isoform_199747_10	chrX	-	7202	10	FSM	ENSMUSG00000045180.14	ENSMUST00000062317.5	6997	10	-205	0	-205	0	multi-exon	TRUE	canonical	3	14	junction_5	17.4384278371675	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151552666	151392987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406314_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
Isoform_199748_4	chrX	-	4340	6	NIC	ENSMUSG00000045180.14	novel	7494	10	NA	NA	-50	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	25.3566559309385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGAATGTCTTTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	151427156	151392990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151426808
Isoform_199749_5	chrX	-	4019	6	NIC	ENSMUSG00000045180.14	novel	4338	6	NA	NA	121	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	23.7739353073907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTAGAATGTCTTTAT	NA	False	NA	-7	True	AATAAA	-16	NA	151427418	151392992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151427389
Isoform_199751_52	chrX	-	7186	10	FSM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	-180	488	-176	-5	multi-exon	FALSE	canonical	3	27	junction_9	12.3987255418341	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTAGAATGTCTTTAT	NA	False	NA	-7	True	AATAAA	-16	NA	151552637	151392992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
Isoform_199752_3	chrX	-	4046	6	NNC	ENSMUSG00000045180.14	novel	4338	6	NA	NA	-8313	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	24.1694021440333	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151435852	151392987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151435801
Isoform_199753_6	chrX	-	1718	4	NNC	ENSMUSG00000063728.11	novel	1212	3	NA	NA	-1668	352	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTATACTCTTCACTGCT	NA	False	NA	NA	False	NA	NA	NA	153720651	153706655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_153708120_153709022_153709112_153718972_153719075_153720588
Isoform_199754_23	chrX	-	1646	4	FSM	ENSMUSG00000079350.3	ENSMUST00000070141.7	1646	4	3	-3	3	3	multi-exon	FALSE	canonical	3	13	junction_3	17.6823829464998	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTAGTTTCTTGTTG	NA	False	NA	-2	True	AATAAA	-19	NA	153778843	153768767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_153770173_153771107_153771197_153777179_153777280_153778791
Isoform_199755_46	chrX	-	1751	5	NNC	ENSMUSG00000079350.3	novel	1646	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	13.4233937586588	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTTAGTTTCTTGTT	NA	False	NA	-3	True	AATAAA	-18	NA	153778845	153768768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_153770173_153771107_153771197_153777179_153777280_153777995_153778100_153778791
Isoform_199756_8	chrX	-	1728	4	FSM	ENSMUSG00000055746.10	ENSMUST00000069477.8	1685	4	-24	-19	-24	19	multi-exon	FALSE	canonical	2	9	junction_2	9.56846672960488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTGCACTGGTGCCCT	NA	False	NA	NA	False	ATTAAA	-38	NA	153816312	153810177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_153811648_153812583_153812673_153815451_153815557_153816248
Isoform_199759_10	chrX	-	1592	3	NIC	ENSMUSG00000055746.10	novel	1685	4	NA	NA	-14	-2	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	13	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGCATTTGTAACAC	NA	False	NA	NA	False	ATTAAA	-17	NA	153816302	153810198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_153811648_153812583_153812673_153816248
Isoform_199761_55	chrX	-	1653	4	FSM	ENSMUSG00000079349.10	ENSMUST00000069556.4	1360	4	-8	-285	-8	1	multi-exon	FALSE	canonical	3	37	junction_1	7.03957069398096	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTTAGTTTCTTTTTG	NA	False	NA	1	True	AATAAA	-19	NA	153846149	153836055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_153837456_153838390_153838480_153844474_153844576_153846086
Isoform_199762_25	chrX	-	1757	5	NNC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	19.2272592950738	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTTAGTTTCTTTTTG	NA	False	NA	1	True	AATAAA	-19	NA	153846149	153836055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_153837456_153838390_153838480_153844474_153844576_153845292_153845397_153846086
Isoform_199763_11	chrX	-	1556	3	NIC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	18.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTTAGTTTCTTTTTG	NA	False	NA	1	True	AATAAA	-19	NA	153846141	153836055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_153837456_153844474_153844576_153846086
Isoform_199764_18	chrX	-	1162	7	FSM	ENSMUSG00000025283.16	ENSMUST00000152463.8	1272	7	101	9	-3	-9	multi-exon	FALSE	canonical	3	28	junction_4	540.496993516153	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCAGCCTGAGCATT	NA	False	NA	-16	True	AATAAA	-15	NA	153999344	153996136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998116_153998227_153998596_153998681_153998780_153998833_153999098
Isoform_199767_646	chrX	-	1049	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	105	8	1	-8	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCAGCCTGAGCATTT	NA	False	NA	-15	True	AATAAA	-16	NA	153999340	153996135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
Isoform_199770_103	chrX	-	1154	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	-1	9	-1	-9	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCAGCCTGAGCATT	NA	False	NA	-16	True	AATAAA	-15	NA	153999446	153996136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
Isoform_199781_1486	chrX	-	959	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	29	2	29	-2	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCGTTTGCCATTGTAAT	NA	False	NA	-3	True	AATAAA	-20	NA	154121434	154106915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
Isoform_199782_224	chrX	-	1004	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	-14	0	-7	0	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGCCATTGTAATTT	NA	False	NA	-1	True	AATAAA	-22	NA	154121477	154106913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
Isoform_199788_4	chrX	-	913	5	ISM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	31884	1797	458	44	3prime_fragment	FALSE	canonical	3	342	junction_4	69.1352840451242	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTTGTCCCTTTAT	NA	False	NA	-2	True	ATTAAA	-19	NA	156243399	156228647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322
Isoform_199789_3	chrX	-	2410	10	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	25	43	intron_retention	FALSE	canonical	3	342	junction_4	49.2072964578563	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGGTGTTTGTCCCTTTA	NA	False	NA	-3	True	ATTAAA	-18	NA	156275015	156228648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
Isoform_199791_168	chrX	-	355	3	ISM	ENSMUSG00000071708.12	ENSMUST00000127089.2	3053	6	0	7524	0	-534	5prime_fragment	FALSE	canonical	3	430	junction_1	30.5	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTTTTTTTTTTTTA	NA	False	NA	NA	False	AAGAAA	-9	NA	156275040	156249393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_156249488_156252983_156253105_156274900
Isoform_199792_17	chrX	-	618	3	ISM	ENSMUSG00000071708.12	ENSMUST00000127089.2	3053	6	-263	7524	-20	-534	5prime_fragment	FALSE	canonical	3	430	junction_1	30.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTTTTTTTTTTTTA	NA	False	NA	NA	False	AAGAAA	-9	NA	156275303	156249393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_156249488_156252983_156253105_156274900
Isoform_199794_19	chrX	-	419	3	ISM	ENSMUSG00000071708.12	ENSMUST00000127089.2	3053	6	-64	7524	-42	-534	5prime_fragment	FALSE	canonical	3	430	junction_1	30.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTTTTTTTTTTTTA	NA	False	NA	NA	False	AAGAAA	-9	NA	156275104	156249393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_156249488_156252983_156253105_156274900
Isoform_199797_5	chrX	-	4824	7	ISM	ENSMUSG00000046873.19	ENSMUST00000065857.6	1737	9	22	12466	22	-13	intron_retention	FALSE	canonical	1	5	junction_6	78.4191019813129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTACGTTTATCATCTT	NA	False	NA	-18	True	AATAAA	-22	NA	156351979	156330832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156351136
Isoform_199799_157	chrX	-	4744	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	53	0	-11	0	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	-5	True	AATAAA	-35	NA	156381658	156330819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
Isoform_1998_30	chr10	-	2242	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_10	60.7736785129878	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	110	False	NA	-1	True	AATAAA	-20	NA	41685883	41594841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685783
Isoform_199808_99	chrX	-	4595	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	-5	True	AATAAA	-35	NA	156381658	156330819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
Isoform_199811_5	chrX	-	4451	9	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	74.2040051142794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATCTTCTGTATCATA	NA	False	NA	-8	True	AATAAA	-32	NA	156381668	156330822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
Isoform_199813_33	chrX	-	2749	2	ISM	ENSMUSG00000046873.19	ENSMUST00000065857.6	1737	9	22	30747	22	-171	5prime_fragment	FALSE	canonical	3	27	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCTTGCTTGTGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	156351979	156349113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_156351813_156351929
Isoform_199814_15	chrX	-	3625	7	NIC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	5	-172	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	90.1432501940969	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGCTTGCTTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	156381670	156349114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_156351813_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
Isoform_199815_27	chrX	-	3465	6	NIC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	-11	-171	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	99.5630453531831	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCTTGCTTGTGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	156381658	156349113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_156351813_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156381491
Isoform_19983_236	chr11	+	6430	47	FSM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	55	6	55	-6	multi-exon	TRUE	canonical	2	239	junction_13	60.0854464039772	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACACCATGGCTGATTGT	NA	False	NA	11	True	AATAAA	-13	NA	30721780	30830355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
Isoform_199834_1560	chrX	-	2787	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	51	10	-6	-10	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTTACAGTTCTTGA	NA	False	NA	-11	True	ATTAAA	-14	NA	158921358	158905214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
Isoform_199835_813	chrX	-	2819	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	19	10	19	-10	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTTACAGTTCTTGA	NA	False	NA	-11	True	ATTAAA	-14	NA	158921390	158905214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
Isoform_199840_112	chrX	-	1429	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	-14	1433	-14	-1433	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTGTATTTGGTGTA	NA	False	NA	-11	True	AGTAAA	-17	NA	158921423	158906637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
Isoform_199847_39	chrX	-	3626	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	89	0	89	0	multi-exon	FALSE	canonical	3	54	junction_9	58.6501491899211	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTCTGTGTATTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	161612361	161561914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
Isoform_199850_40	chrX	-	3802	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	56	4	56	-4	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACAGCTTCTGTGTAT	NA	False	NA	NA	False	AGTAAA	-13	NA	161612394	161561918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_199851_70	chrX	-	3769	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	93	0	93	0	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTCTGTGTATTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	161612357	161561914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_199858_22	chrX	-	2488	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	57	-20	57	19	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAGATTTCTTTGTC	NA	False	NA	13	True	AATAAA	-36	NA	161612393	161571893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
Isoform_199859_15	chrX	-	2566	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	88	-129	88	128	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGTTGGTTTTGTC	NA	False	NA	-23	True	ATTAAA	-16	NA	161612362	161571784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
Isoform_199860_51	chrX	-	2635	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	56	9980	56	18	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAAGATTTCTTTGT	NA	False	NA	12	True	AATAAA	-35	NA	161612394	161571894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_199862_56	chrX	-	2712	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	89	9870	89	128	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGTTGGTTTTGTC	NA	False	NA	-23	True	ATTAAA	-16	NA	161612361	161571784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_199863_4	chrX	-	2764	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	36	9871	36	127	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTGTTGGTTTTGT	NA	False	NA	-24	True	ATTAAA	-15	NA	161612414	161571785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_199864_171	chrX	-	2278	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	17	-208	17	208	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATTGTACGTATTTAT	NA	False	NA	-4	True	AATAAA	-20	NA	161671426	161639844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
Isoform_199871_5	chrX	-	3868	9	NNC	ENSMUSG00000031357.4	novel	2087	9	NA	NA	17	207	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	45.3755165259857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAATTGTACGTATTTA	NA	False	NA	-5	True	AATAAA	-19	NA	161671426	161639845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161653919_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
Isoform_199872_4	chrX	-	3402	5	ISM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	-38	12873	-38	-12021	5prime_fragment	FALSE	canonical	3	120	junction_2	7.90569415042095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	161671481	161652925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
Isoform_199874_79	chrX	-	1976	11	FSM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-73	832	-1	-832	multi-exon	FALSE	canonical	3	107	junction_1	287.175643117588	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	162741658	162719270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
Isoform_199876_36	chrX	-	1808	12	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-1	-832	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	279.519747524568	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	162741658	162719270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
Isoform_199877_7	chrX	-	1358	9	ISM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-108	4528	-36	-3	5prime_fragment	FALSE	canonical	3	144	junction_2	285.800383790855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATACTCTTTTATTT	NA	False	NA	NA	False	CATAAA	-14	NA	162741693	162722966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
Isoform_199884_86	chrX	-	1674	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-34	2227	29	978	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741628	162735608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
Isoform_199888_48	chrX	-	1704	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-64	2227	-1	978	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741658	162735608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
Isoform_199891_10	chrX	-	3905	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-40	2	23	-2	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTTAAAAACTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	162741634	162733383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
Isoform_199895_15	chrX	-	1283	6	FSM	ENSMUSG00000031370.13	ENSMUST00000147928.8	460	6	-110	-713	-1	664	multi-exon	FALSE	canonical	3	79	junction_5	268.200372855818	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTATCCTGTCTAAC	NA	False	NA	-17	True	ATTAAA	-26	NA	162741658	162735922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
Isoform_199896_7	chrX	-	1590	6	FSM	ENSMUSG00000031370.13	ENSMUST00000147928.8	460	6	-103	-1027	6	978	multi-exon	FALSE	canonical	3	79	junction_5	268.200372855818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741651	162735608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
Isoform_199898_51	chrX	-	1221	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-1	663	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTATCCTGTCTAA	NA	False	NA	-18	True	ATTAAA	-25	NA	162741658	162735923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
Isoform_199900_48	chrX	-	1533	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	1	977	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCCTTGAAGATATTT	NA	False	NA	-11	True	AATATA	-14	NA	162741656	162735609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
Isoform_199911_185	chrX	-	1778	4	FSM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	7	-2	7	2	multi-exon	FALSE	canonical	3	101	junction_3	206.108385726216	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859110	162853698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859010
Isoform_199912_46	chrX	-	2071	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	-357	-2	-14	2	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859503	162853698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
Isoform_199914_462	chrX	-	1699	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	15	-2	-14	2	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859131	162853698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
Isoform_199916_175	chrX	-	1999	4	FSM	ENSMUSG00000040749.12	ENSMUST00000134272.2	803	4	-14	-1182	-14	2	multi-exon	FALSE	canonical	3	72	junction_3	219.75794765049	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859503	162853698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859182
Isoform_199919_6	chrX	-	2423	15	FSM	ENSMUSG00000061778.11	ENSMUST00000112248.9	2487	15	64	0	11	0	multi-exon	FALSE	canonical	1	2	junction_1	17.7207649441011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763307	163719164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_163720081_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
Isoform_199920_12	chrX	-	2652	15	FSM	ENSMUSG00000061778.11	ENSMUST00000112247.9	2479	15	-31	-142	0	-7	multi-exon	FALSE	canonical	1	3	junction_1	17.508598470699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTTTTGTCTCTA	NA	False	NA	NA	False	AATAAA	-11	NA	163763324	163719171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_163720300_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
Isoform_199922_107	chrX	-	4048	15	FSM	ENSMUSG00000061778.11	ENSMUST00000004715.2	2015	15	7	-2040	0	0	multi-exon	FALSE	canonical	3	42	junction_12	10.321366781822	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763324	163719164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
Isoform_199923_3	chrX	-	5690	13	NIC	ENSMUSG00000061778.11	novel	2487	15	NA	NA	-11	0	intron_retention	FALSE	canonical	3	42	junction_10	10.4519402770756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763304	163719164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
Isoform_199924_292	chrX	-	3547	23	FSM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	-3	909	-3	-909	multi-exon	FALSE	canonical	3	107	junction_14	25.8655535317559	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTTTGTGTATTTTT	NA	False	NA	NA	False	ATTAAA	-8	NA	165223703	165173937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
Isoform_199925_27	chrX	-	4460	23	FSM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	-4	-3	-4	3	multi-exon	FALSE	canonical	3	107	junction_14	25.8655535317559	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	165223704	165173025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
Isoform_199933_300	chrX	-	1247	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	200	0	-21	0	multi-exon	FALSE	canonical	3	555	junction_2	7.5	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGCAATGCTTTTTAA	NA	False	NA	-8	True	ATTAAA	-24	NA	165262663	165240248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_165241340_165245310_165245339_165262535
Isoform_199942_13	chrX	-	5316	4	ISM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	16	4	16	-4	intron_retention	FALSE	canonical	3	63	junction_2	3.09120616516523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCTTATTCTCCAAT	NA	False	NA	-6	True	AATAAA	-16	NA	165293458	165282811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901
Isoform_199943_139	chrX	-	4034	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	11	5	11	-5	multi-exon	FALSE	canonical	3	63	junction_2	3.35410196624968	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTCTTATTCTCCAA	NA	False	NA	-7	True	AATAAA	-15	NA	165293463	165282812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293288
Isoform_199947_11	chrX	-	2703	12	FSM	ENSMUSG00000000402.3	ENSMUST00000000412.3	2704	12	10	-9	10	9	multi-exon	FALSE	canonical	2	11	junction_6	3.09892009982897	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTTTGTCATCTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	165368706	165305993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_165306968_165310309_165310576_165314967_165315070_165319195_165319277_165321409_165321731_165329416_165329540_165331818_165331954_165335420_165335541_165339965_165340086_165345937_165346031_165351404_165351518_165368451
Isoform_199951_1012	chrX	-	614	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	154	0	-12	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	1012	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165992157	165990088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_165990532_165990932_165991048_165992101
Isoform_199960_357	chrX	-	3634	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	60	5	21	-5	multi-exon	TRUE	canonical	3	187	junction_5	11.6535640709422	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATAGTTCTTGTCATCC	NA	False	NA	-8	True	AATAAA	-19	NA	166165685	166129322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
Isoform_199968_12	chrX	-	2904	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	21	774	-18	-774	multi-exon	FALSE	canonical	3	187	junction_5	11.6535640709422	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTGGGTTTTATGGC	NA	False	NA	0	True	GATAAA	-14	NA	166165724	166130091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
Isoform_199970_21	chrX	-	3679	7	NNC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	70.4258869703148	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATAGTTCTTGTCATCC	NA	False	NA	-8	True	AATAAA	-19	NA	166165721	166129322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156989_166157183_166165465
Isoform_199973_6	chrX	-	623	3	FSM	ENSMUSG00000025742.6	ENSMUST00000145456.2	599	3	-27	3	12	-3	multi-exon	FALSE	canonical	1	3	junction_1	111.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAATTTATGTCCTAA	NA	False	NA	NA	False	AATAAA	-22	NA	166165733	166155407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_166155579_166156998_166157183_166165465
Isoform_199974_7	chrX	-	2431	12	ISM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	1346	4	-33	1	3prime_fragment	FALSE	canonical	3	23	junction_11	7.54928708800971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAGCAAGAGGAGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	167455548	167437116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258
Isoform_199975_3	chrX	-	5283	12	ISM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	1346	-2848	-33	2848	3prime_fragment	TRUE	canonical	3	23	junction_11	7.54928708800971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTTTTGTCGGGTAT	NA	False	NA	NA	False	NA	NA	NA	167455548	167434264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258
Isoform_199977_15	chrX	-	2258	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	56	2	56	-2	multi-exon	FALSE	canonical	3	28	junction_9	6.17646827325928	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAAGAGGAGTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	167456838	167437114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
Isoform_199979_3	chrX	-	2391	12	NNC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	11.6888022985058	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAGAGGAGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	167455507	167437112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453305_167454138_167454240_167454790_167454887_167455258
Isoform_199980_4	chrX	-	2276	12	NNC	ENSMUSG00000031358.18	novel	2316	12	NA	NA	40	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	11.0191418723649	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGAGGAGTTTTGCTCTG	NA	False	NA	NA	False	AATAAA	-26	NA	167456854	167437109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453305_167454138_167454240_167454790_167454887_167456723
Isoform_199984_228	chrX	-	2531	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	-60	2	18	-2	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTAGAGTGATTTTT	NA	False	NA	-2	True	AATAAA	-23	NA	168103350	168094527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
Isoform_199985_20	chrX	-	2681	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	-210	2	-132	-2	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTAGAGTGATTTTT	NA	False	NA	-2	True	AATAAA	-23	NA	168103500	168094527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
Isoform_199991_263	chrX	-	2383	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	-65	2	27	-2	multi-exon	FALSE	canonical	3	290	junction_6	111.381351920129	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTAGAGTGATTTTT	NA	False	NA	-2	True	AATAAA	-23	NA	168103341	168094527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
Isoform_199998_94	chrX	-	2324	7	NIC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	191.804950115707	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTAGAGTGATTTTT	NA	False	NA	-2	True	AATAAA	-23	NA	168103342	168094527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103170
Isoform_200_59	ERCC-00160	+	725	1	FSM	ERCC-00160A	DQ883658	727	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	1	726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00160_+_0_700
Isoform_2000_4	chr10	-	2249	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-80	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	64.5173620043473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	-2	True	NA	0	True	AATAAA	-21	NA	41685947	41594840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685841
Isoform_200003_14	chrX	-	2721	7	NNC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	205.927711156663	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTCTTAGAGTGATT	NA	False	NA	-5	True	AATAAA	-20	NA	168103350	168094530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102778
Isoform_200008_41	chrX	-	3434	4	NNC	ENSMUSG00000050424.10	novel	1280	2	NA	NA	-2591	0	intron_retention	FALSE	canonical	3	77	junction_3	4.18993502999218	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTATGTTCTTTCTGGC	NA	False	NA	-7	True	AATAAA	-14	NA	72083300	72077593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72080775_72080892_72080952_72081548_72081672_72083229
Isoform_200009_6	chrX	-	365	2	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	127	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGTACCACTCAACCTA	1164	False	NA	NA	False	AATAAA	-15	NA	83486712	83473425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_-_83473652_83486573
Isoform_200010_78	chrX	-	3711	2	Genic_Genomic	ENSMUSG00000096966.3	novel	2298	1	NA	NA	-2981	1250	multi-exon	FALSE	canonical	3	30	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTCACCACTTCC	NA	False	NA	-2	True	AATAAA	-16	NA	72445323	72438794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_-_72442387_72445204
Isoform_200012_3	chrX	-	2976	4	Intergenic	novelGene_12072	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTATGTGTATGTGTAA	NA	False	NA	-2	True	NA	NA	NA	95009671	95004075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695
Isoform_200013_8	chrX	-	2307	5	Intergenic	novelGene_12071	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_4	9.30053761886914	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGTGTATGTGTAAGAT	NA	False	NA	1	True	NA	NA	NA	95012211	95004072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008875_95012086
Isoform_200014_4	chrX	-	2168	5	Intergenic	novelGene_12073	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_4	10.5918600821574	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTATGTGTATGTGTAA	NA	False	NA	-2	True	NA	NA	NA	95012215	95004075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008735_95012086
Isoform_200015_60	chrX	-	3139	7	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	105	-4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	81.2617512869506	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTACAGTTTTTAA	NA	False	NA	-7	True	AATAAA	-21	NA	12539802	12521121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_12523275_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
Isoform_200018_3	chrX	-	811	7	Intergenic	novelGene_12325	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_6	10.9848380355227	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCTGCCTTACACAGTT	NA	False	NA	-1	True	AATAAA	-17	NA	169094305	169090870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092263_169092526_169092592_169092967_169093033_169093216_169093264_169094086
Isoform_200019_3	chrX	-	952	7	Intergenic	novelGene_12326	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_6	10.9848380355227	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTGCCTTACACAGT	NA	False	NA	-2	True	AATAAA	-16	NA	169094447	169090871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092263_169092526_169092592_169092967_169093033_169093216_169093264_169094086
Isoform_200021_7	chrX	-	5386	6	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	6	2763	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	9.86711710683521	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATGTGTTTTTATAAA	NA	False	NA	NA	False	AATAAA	-16	NA	103244785	103124556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103143231_103143288_103244238
Isoform_200023_7	chrX	-	5362	5	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-23	2766	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	10.779030568655	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGTTTTTATAAAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	103244814	103124553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103244238
Isoform_200024_7	chrX	-	5115	6	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-413	2766	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	11.6275534829989	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGTTTTTATAAAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	103245204	103124553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103244238_103244478_103245114
Isoform_200025_17	chrX	-	1713	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	243	-34256	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	26.949768088056	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAGTATGCAGAATAAT	NA	False	NA	NA	False	ATTAAA	-11	NA	12628069	12609623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_12609903_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_200026_10	chrX	-	1893	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	64	-34255	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	26.949768088056	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAGTATGCAGAATAATA	NA	False	NA	NA	False	ATTAAA	-12	NA	12628248	12609622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_12609903_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_200027_3	chrX	-	2590	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	57	-33565	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	26.949768088056	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGGCATCTAGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	12628255	12608932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_12609903_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_200028_5	chrX	-	1985	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-28	-34255	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	26.949768088056	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAGTATGCAGAATAATA	NA	False	NA	NA	False	ATTAAA	-12	NA	12628340	12609622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_12609903_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_200029_3	chrX	-	1156	3	Intergenic	novelGene_12205	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	13	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTCTAGAGTTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	138300986	138296086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_138296298_138297305_138297544_138300279
Isoform_200030_29	chrX	-	1065	3	Intergenic	novelGene_12203	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	13	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCTAGAGTTTTTATG	NA	False	NA	NA	False	AATAAA	-25	NA	138300894	138296085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_138296298_138297305_138297544_138300279
Isoform_200032_4	chrX	-	862	4	Intergenic	novelGene_12204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_3	27.1456974286698	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCTAGAGTTTTTATG	NA	False	NA	NA	False	AATAAA	-25	NA	138301083	138296085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_138296298_138297305_138297544_138300279_138300652_138301043
Isoform_200033_16	chrX	-	3439	27	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	-1	-37629	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	91.9050835302282	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCCAAAGTGTATATTT	4276	False	NA	NA	False	AATAAA	-17	NA	92675762	92561724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
Isoform_200035_20	chrX	-	4159	2	Genic_Genomic	ENSMUSG00000052157.5	novel	1551	1	NA	NA	-358	3498	multi-exon	FALSE	canonical	3	17	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCATCTATTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	154089103	154083696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_-_154086142_154087389
Isoform_200037_14	chrX	-	1421	12	NNC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	62	3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	20.4110648974504	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGCTGAACTGGGTGT	NA	False	NA	1	True	AATAAA	-18	NA	72703661	72699596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72699940_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
Isoform_200038_4	chrX	-	1363	11	NNC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	26.4990565869806	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703676	72699599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_72699940_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72703624
Isoform_200039_29	chrX	-	1125	2	Intergenic	novelGene_11850	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGGTGGTTGCGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	9198862	9195214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_9196165_9198687
Isoform_200040_17	chrX	-	2427	5	Intergenic	novelGene_11961	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	3.278719262151	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGTGTCAGATTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	55338549	55322445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_55324058_55325906_55326100_55327526_55327950_55337587_55337708_55338470
Isoform_200041_5	chrX	-	2559	6	Intergenic	novelGene_11962	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_5	4.1182520563948	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGTGTCAGATTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	55338549	55322445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_55324058_55325906_55326100_55327526_55327950_55337587_55337708_55337923_55338056_55338470
Isoform_200044_8	chrX	-	1559	7	NNC	ENSMUSG00000006423.16	novel	678	3	NA	NA	19	-3640	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	84.3374504923854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGCGTTTTACAGCCTA	NA	False	NA	NA	False	AATAAA	-19	NA	36127872	36091029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_36091896_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
Isoform_200045_5	chrX	-	860	5	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	9	-5016	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	116.215317406958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	36373966	36366118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_36366428_36368081_36368181_36372567_36372675_36372800_36372908_36373728
Isoform_200046_8	chrX	-	2616	2	Genic_Genomic	ENSMUSG00000059334.7	novel	2347	1	NA	NA	-10	1355	multi-exon	FALSE	canonical	2	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTCCTTTTGCAGTT	NA	False	NA	NA	False	AATAAA	-13	NA	52778371	52774659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_-_52774921_52776016
Isoform_200048_5	chrX	-	1423	10	NNC	ENSMUSG00000067567.13	novel	686	7	NA	NA	-2	13334	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	19.2700112437262	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGTGTTAATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	101548754	101435918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_101436253_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
Isoform_200049_3	chrX	-	1673	10	NNC	ENSMUSG00000067567.13	novel	686	7	NA	NA	-2	13584	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	19.2700112437262	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGGAATAACTTGGA	NA	False	NA	NA	False	NA	NA	NA	101548754	101435668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_101436253_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
Isoform_200050_4	chrX	-	789	5	NNC	ENSMUSG00000067567.13	novel	591	3	NA	NA	-22	4402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.8998327754521	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTGCACTGTAGTATT	NA	False	NA	NA	False	TATAAA	-14	NA	101548709	101537359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_101537673_101541736_101541879_101543427_101543559_101548004_101548058_101548559
Isoform_200052_4	chrX	-	2789	2	Antisense	novelGene_ENSMUSG00000041718.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTACTCTGTGTATGT	NA	False	NA	NA	False	AATAAA	-28	NA	143100952	143097442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_-_143099864_143100584
Isoform_200055_3	chrX	-	1600	3	Genic_Genomic	ENSMUSG00000062162.3	novel	993	1	NA	NA	-7900	457	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAATTCATTAGAAAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	91067839	91058339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_-_91059836_91059955_91059998_91067777
Isoform_200058_3	chrX	-	820	5	NNC	ENSMUSG00000031357.4	novel	2087	9	NA	NA	13	-18312	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	52.4994047585304	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGTCTTCCTTGACT	NA	False	NA	NA	False	NA	NA	NA	161671430	161659216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_161659411_161661326_161661401_161665675_161665743_161665963_161666083_161671064
Isoform_200059_3	chrX	-	681	2	NNC	ENSMUSG00000037341.15	novel	2512	17	NA	NA	2	-59302	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTGTAGTATATG	NA	False	NA	NA	False	AATAAA	-17	NA	20158044	20090056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_20090292_20157598
Isoform_200061_27	chrX	+	2413	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	263	360	263	-360	multi-exon	FALSE	canonical	3	23	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTAGAAGTTACTTGG	NA	False	NA	13	True	NA	NA	NA	5959769	5966804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_5960459_5965080
Isoform_200063_5	chrX	+	2517	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	159	360	159	-360	multi-exon	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTAGAAGTTACTTGG	NA	False	NA	13	True	NA	NA	NA	5959665	5966804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_5960459_5965080
Isoform_200065_8	chrX	+	8264	9	FSM	ENSMUSG00000068270.16	ENSMUST00000103005.10	4839	9	186	-3611	186	0	multi-exon	FALSE	canonical	2	6	junction_3	2.54644359843292	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTCGTCTCTGATG	NA	False	NA	NA	False	AATAAA	-14	NA	6312093	6549502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_6312316_6432846_6432999_6492882_6493018_6495245_6497710_6503009_6503072_6535713_6536491_6541154_6541336_6544276_6544547_6545501
Isoform_200067_3	chrX	+	1329	3	FSM	ENSMUSG00000031145.16	ENSMUST00000141876.2	1708	3	-93	472	-93	-472	multi-exon	FALSE	canonical	3	74	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATAGTGTTCAGGAAAA	NA	False	NA	NA	False	AAGAAA	-4	NA	7523617	7526895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7523740_7524859_7524946_7525774
Isoform_200068_8	chrX	+	2715	8	ISM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	121	5	-91	0	intron_retention	FALSE	canonical	3	64	junction_3	5.92814112035612	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTTTATTGTTTATT	NA	False	NA	92	True	AAAAAG	-26	NA	7523619	7534192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510
Isoform_200069_18	chrX	+	2631	8	ISM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	112	98	-100	-93	intron_retention	FALSE	canonical	3	64	junction_3	5.92814112035612	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACAGGCCTGGCTTCT	NA	False	NA	-1	True	NA	NA	NA	7523610	7534099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510
Isoform_200070_35	chrX	+	2175	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	119	7	-93	-2	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTATTTTTATTGTTTA	NA	False	NA	90	True	AAAAAG	-24	NA	7523617	7534190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
Isoform_200071_188	chrX	+	2113	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	114	74	-98	-69	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGGTTTTGCCTCAAT	NA	False	NA	23	True	AAGAAA	-19	NA	7523612	7534123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
Isoform_200072_21	chrX	+	2402	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	134	-235	-78	7	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCTCAGTGGAGAATAC	NA	False	NA	NA	False	AATAAA	-17	NA	7523632	7534432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
Isoform_200073_5	chrX	+	3071	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	119	-889	-93	661	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCCTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	7523617	7535086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
Isoform_200075_8	chrX	+	2405	9	NNC	ENSMUSG00000031145.16	novel	2301	9	NA	NA	-98	-71	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	24.9336619853563	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAATGGTTTTGCCTCA	NA	False	NA	21	True	AAGAAA	-17	NA	7523612	7534121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_7523740_7524859_7524946_7525774_7525959_7529409_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
Isoform_200077_634	chrX	+	3487	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	83	9	83	-9	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTAAGTCGCATT	NA	False	NA	NA	False	NA	NA	NA	7563452	7576492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
Isoform_200084_14	chrX	+	3567	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	3	9	3	-9	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTAAGTCGCATT	NA	False	NA	NA	False	NA	NA	NA	7563372	7576492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
Isoform_200092_3	chrX	+	1582	11	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	97	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	64.5585780512551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAAGGGTGGGGCGTGCT	3879	False	NA	16	True	AATAAA	-29	NA	7588328	7594439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7588470_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_200093_4	chrX	+	1694	11	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	26	-6	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	64.5585780512551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACCTCAAGGGTGGGGC	3808	False	NA	11	True	AATAAA	-24	NA	7588257	7594434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7588516_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_200094_3	chrX	+	1544	11	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	9	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	64.5585780512551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTTGTGACTGGAGTG	3771	False	NA	16	True	AATAAA	-18	NA	7588220	7594247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7588516_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_200095_8	chrX	+	1758	12	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	75.0007162500234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAAGGGTGGGGCGTGCT	4040	False	NA	16	True	AATAAA	-29	NA	7588489	7594439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7588618_7589803_7589993_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_200098_56	chrX	+	1557	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	34	18	1	6	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTTGACCTCAAGG	4040	False	NA	4	True	AATAAA	-17	NA	7588489	7594427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_2001_26	chr10	-	2363	11	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-5592	2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_10	58.0965575572254	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	5920	False	NA	1	True	AATAAA	-22	NA	41628226	41594839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
Isoform_200101_13	chrX	+	1496	11	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_10	63.2250741399328	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTTGACCTCAAGG	4040	False	NA	4	True	AATAAA	-17	NA	7588489	7594427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
Isoform_200102_10	chrX	+	1586	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115689.10	1568	11	-20	2	0	-2	multi-exon	FALSE	canonical	3	26	junction_1	58.911883351324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAAGGGTGGGGCGTGC	4018	False	NA	15	True	AATAAA	-28	NA	7588467	7594438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7588618_7590091_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_200106_4	chrX	+	1151	6	ISM	ENSMUSG00000039382.13	ENSMUST00000208517.2	755	7	1774	-355	325	-4	3prime_fragment	FALSE	canonical	3	181	junction_5	22.2261107708929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCAAGGGTGGGGCGT	7916	False	NA	13	True	AATAAA	-26	NA	7592365	7594436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_200107_26	chrX	+	1549	2	ISM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	123	1	123	-1	intron_retention	FALSE	canonical	3	906	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGCCTCCTGTGTGAA	1293	False	NA	6	True	AATAAA	-19	NA	7594800	7597302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_7595002_7595954
Isoform_200108_21	chrX	+	1314	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	25	0	25	0	multi-exon	FALSE	canonical	3	755	junction_2	75.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1195	False	NA	7	True	AATAAA	-20	NA	7594702	7597303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7595002_7595954_7596173_7596506
Isoform_200109_943	chrX	+	1216	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	123	0	123	0	multi-exon	FALSE	canonical	3	755	junction_2	75.5	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1293	False	NA	7	True	AATAAA	-20	NA	7594800	7597303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7595002_7595954_7596173_7596506
Isoform_200114_104	chrX	+	2945	10	NIC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	90.0647229551485	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628795	7641438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7628870_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_200121_816	chrX	+	3265	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	9	3	3	0	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628905	7641438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_200122_69	chrX	+	3375	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	-101	3	-3	0	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628795	7641438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_200127_69	chrX	+	3150	9	FSM	ENSMUSG00000000134.18	ENSMUST00000079542.13	3163	9	13	0	1	0	multi-exon	FALSE	canonical	3	29	junction_4	94.1407689314252	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628915	7641438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_200131_79	chrX	+	3236	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115679.8	3239	10	1	2	1	0	multi-exon	FALSE	canonical	3	33	junction_2	88.3978101510788	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628915	7641438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_200137_121	chrX	+	2910	10	NIC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	87.2919042249043	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGTCTCCCGTTCTTG	NA	False	NA	23	True	AATAAA	-34	NA	7630199	7641439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7630238_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_200141_20	chrX	+	2914	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115677.8	2943	10	27	2	27	0	multi-exon	FALSE	canonical	3	13	junction_1	93.7669820010234	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7630224	7641438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7630268_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_200153_14	chrX	+	3017	26	FSM	ENSMUSG00000031153.17	ENSMUST00000115675.9	3015	26	-2	0	-1	0	multi-exon	FALSE	canonical	2	9	junction_12	17.6906755099968	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3258	False	NA	7	True	NA	NA	NA	7656231	7686802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
Isoform_200154_3	chrX	+	3782	25	NIC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	9	junction_12	17.9534506123165	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3274	False	NA	11	True	NA	NA	NA	7656247	7686806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
Isoform_200155_54	chrX	+	2923	25	FSM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	229	4	0	0	multi-exon	FALSE	canonical	2	42	junction_24	10.7256669049321	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3259	False	NA	7	True	NA	NA	NA	7656232	7686802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
Isoform_200157_9	chrX	+	3701	24	NIC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	-1	0	intron_retention	FALSE	canonical	2	42	junction_23	10.5842555254659	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3258	False	NA	7	True	NA	NA	NA	7656231	7686802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
Isoform_200158_5	chrX	+	3614	24	NIC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	0	0	intron_retention	FALSE	canonical	2	42	junction_23	10.8740860163911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3273	False	NA	7	True	NA	NA	NA	7656246	7686802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
Isoform_200160_4	chrX	+	2787	23	NIC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	16.0309617782961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTCTGGTCTCATTC	3259	False	NA	6	True	NA	NA	NA	7656232	7686801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
Isoform_200161_3	chrX	+	2736	22	NIC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	19.6223991589417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTCTGGTCTCATTCTT	3264	False	NA	8	True	NA	NA	NA	7656237	7686803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
Isoform_200162_9	chrX	+	4500	7	NIC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	-8	-585	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.11890797254573	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTACTGACTCTGTGGA	NA	False	NA	NA	False	AATAAA	-26	NA	7688519	7703934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7688630_7688839_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7702504
Isoform_200163_13	chrX	+	3365	7	NNC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	-20	-584	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	7.80313327381308	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTACTGACTCTGTGGAT	NA	False	NA	NA	False	AATAAA	-27	NA	7688507	7703935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_7688630_7689987_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7702504
Isoform_200164_12	chrX	+	4716	6	FSM	ENSMUSG00000009731.5	ENSMUST00000009875.5	5287	6	-12	583	-12	-583	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGACTCTGTGGATT	NA	False	NA	NA	False	AATAAA	-28	NA	7688515	7703936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7702504
Isoform_200170_47	chrX	+	2115	10	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	160.029472594161	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708318	7741096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_200172_64	chrX	+	2542	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-2	3	-2	2	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAACTCTATTCTGTGT	NA	False	NA	7	True	AATAAA	-19	NA	7708318	7741526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200173_120	chrX	+	2112	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-2	433	-2	-3	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708318	7741096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200179_65	chrX	+	2244	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	224	3	-2	-3	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708318	7741096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_200181_28	chrX	+	2677	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	224	-430	-2	0	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7708318	7741529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_200182_37	chrX	+	2499	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	-31	3	-6	-3	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708063	7741096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_200184_20	chrX	+	2962	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	-494	3	-2	-3	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7707600	7741096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_200188_21	chrX	+	2985	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	-90	-424	-65	0	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGCAACTCTATTCTG	NA	False	NA	4	True	AATAAA	-16	NA	7708004	7741523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_200190_184	chrX	+	2541	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-51	1769	-51	-3	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708018	7741096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200191_174	chrX	+	2673	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	250	1336	-1	0	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7708319	7741529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200192_301	chrX	+	2241	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	249	1769	-2	-3	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708318	7741096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200193_83	chrX	+	2964	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-474	1769	-7	-3	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7707595	7741096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200194_87	chrX	+	2977	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-53	1335	-53	1	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTATTCTGTGTGGGA	NA	False	NA	11	True	AATAAA	-23	NA	7708016	7741530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200196_49	chrX	+	3388	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-467	1338	0	-2	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAACTCTATTCTGTGTG	NA	False	NA	8	True	AATAAA	-20	NA	7707602	7741527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200199_19	chrX	+	4319	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-65	5	-65	1	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATCTTGTTTGTGTGTG	NA	False	NA	17	True	AATAAA	-26	NA	7708004	7742860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_2002_5	chr10	-	2311	12	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	76.3137282798249	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	368	False	NA	0	True	AATAAA	-21	NA	41685625	41594840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41631694_41631806_41685568
Isoform_200200_26	chrX	+	4003	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	250	6	-1	0	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATCTTGTTTGTGTGT	NA	False	NA	16	True	AATAAA	-25	NA	7708319	7742859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200215_20	chrX	+	2654	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-65	-3	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708004	7741096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200216_24	chrX	+	2338	8	NIC	ENSMUSG00000031154.16	novel	2708	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCAACAAATCAAAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	7708319	7741095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200218_18	chrX	+	3065	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	0	6	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAAAAAGAATATTCATG	NA	False	NA	NA	False	ATTAAA	-27	NA	7707602	7741105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_200227_37	chrX	+	2066	6	FSM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	-23	2	17	-2	multi-exon	FALSE	canonical	3	69	junction_5	7.30479294709987	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATTGCCATTTATAG	NA	False	NA	3	True	AATAAA	-13	NA	7744517	7749669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7744796_7744922_7745033_7745866_7745918_7747486_7747860_7748311_7748489_7748592
Isoform_200228_164	chrX	+	2040	6	FSM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	4	1	4	-1	multi-exon	FALSE	canonical	3	69	junction_5	7.30479294709987	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGATTGCCATTTATAGA	NA	False	NA	4	True	AATAAA	-14	NA	7744544	7749670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7744796_7744922_7745033_7745866_7745918_7747486_7747860_7748311_7748489_7748592
Isoform_200229_4	chrX	+	605	2	ISM	ENSMUSG00000031156.19	ENSMUST00000208640.2	486	4	0	5972	0	1	5prime_fragment	FALSE	canonical	3	84	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	7750571	7752491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_7750673_7751987
Isoform_200230_299	chrX	+	2324	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	305	465	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGTGTAGCTTTCTGA	NA	False	NA	6	True	AATAAA	-18	NA	7750571	7760266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
Isoform_200232_15	chrX	+	2630	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	-1	465	-1	0	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGTGTAGCTTTCTGA	NA	False	NA	6	True	AATAAA	-18	NA	7750265	7760266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
Isoform_200235_536	chrX	+	897	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	0	1484	0	-103	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1189	False	NA	31	True	TTTAAA	-18	NA	7765595	7773106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
Isoform_200237_18	chrX	+	2337	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	44	0	44	0	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGCTGTTTGTC	1233	False	NA	2	True	NA	NA	NA	7765639	7774590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
Isoform_200238_8	chrX	+	977	5	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	1	-103	intron_retention	FALSE	canonical	3	843	junction_3	49.2290564605904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1190	False	NA	31	True	TTTAAA	-18	NA	7765596	7773106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772631_7772726
Isoform_200239_8	chrX	+	795	5	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	2	-103	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	379.892748022386	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1191	False	NA	31	True	TTTAAA	-18	NA	7765597	7773106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7765709_7769911_7769976_7772309_7772439_7772519_7772631_7772726
Isoform_200241_46	chrX	+	943	3	FSM	ENSMUSG00000039278.11	ENSMUST00000041096.4	2193	3	75	1175	75	-1175	multi-exon	FALSE	canonical	3	43	junction_1	26.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGTCTGAGCGCCCT	NA	False	NA	5	True	AATAAA	-15	NA	7786135	7789474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7786284_7788286_7788754_7789146
Isoform_200246_6	chrX	+	1461	4	FSM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	-14	2	-14	1	multi-exon	FALSE	canonical	3	19	junction_1	38.6091526281874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGGCCACTGGATT	7713	False	NA	27	True	TATAAA	-17	NA	7915472	7939196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7915823_7926454_7926526_7936874_7937304_7938585
Isoform_200247_3	chrX	+	1573	4	FSM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	-127	3	-51	0	multi-exon	FALSE	canonical	3	19	junction_1	38.6091526281874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	7600	False	NA	26	True	TATAAA	-16	NA	7915359	7939195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7915823_7926454_7926526_7936874_7937304_7938585
Isoform_200248_4	chrX	+	1389	3	NIC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	48	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCTGGGCCACTGGA	7712	False	NA	25	True	TATAAA	-15	NA	7915471	7939194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7915823_7936874_7937304_7938585
Isoform_200249_3	chrX	+	1658	4	NNC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	-233	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.7482551341139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	7418	False	NA	26	True	TATAAA	-16	NA	7915177	7939195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_7915276_7915301_7915823_7936874_7937304_7938585
Isoform_200250_4	chrX	+	1573	3	NIC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	-14	181	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	48	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCCTTGCCATGATTA	7713	False	NA	NA	False	ATTAAA	-28	NA	7915472	7939379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7915823_7936874_7937304_7938585
Isoform_200251_13	chrX	+	695	3	ISM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-3	1767	-3	-1052	5prime_fragment	FALSE	canonical	3	56	junction_1	9.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCAGGTGTTTTCTGAG	NA	False	NA	15	True	NA	NA	NA	7917826	7937428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_7917897_7926454_7926526_7936874
Isoform_200252_3	chrX	+	2465	3	ISM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-3	-3	-3	0	intron_retention	FALSE	canonical	3	56	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	NA	False	NA	29	True	TATAAA	-19	NA	7917826	7939198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_7917897_7926454_7926526_7936874
Isoform_200253_29	chrX	+	1179	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-1	-1	-1	1	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGGCCACTGGATT	NA	False	NA	27	True	TATAAA	-17	NA	7917828	7939196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
Isoform_200254_4	chrX	+	1368	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-3	-188	-3	185	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGCCATGATTAGTGA	NA	False	NA	NA	False	ATTAAA	-32	NA	7917826	7939383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
Isoform_200255_3	chrX	+	3231	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-10	-2044	-10	381	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGTCCGTTTCCATCA	NA	False	NA	NA	False	AATAAA	-21	NA	7917819	7941239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
Isoform_200256_5	chrX	+	988	4	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	5	381	combination_of_known_junctions	TRUE	canonical	3	17	junction_3	24.1430919496424	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGTCCGTTTCCATCA	NA	False	NA	NA	False	AATAAA	-21	NA	7917834	7941239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7917897_7926454_7926526_7936874_7937304_7940813
Isoform_200257_38	chrX	+	1110	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGGCCACTGGATT	NA	False	NA	27	True	TATAAA	-17	NA	7917826	7939196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7917897_7936874_7937304_7938585
Isoform_200259_5	chrX	+	1382	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-276	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	9794	False	NA	26	True	TATAAA	-16	NA	7917553	7939195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7917897_7936874_7937304_7938585
Isoform_200260_4	chrX	+	1853	16	FSM	ENSMUSG00000031170.15	ENSMUST00000033512.11	1868	16	11	4	11	1	multi-exon	FALSE	canonical	1	1	junction_9	2.63818119165458	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGGTCTGAGCCGTG	5424	False	NA	NA	False	AATAAA	-13	NA	8137630	8146414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_8137745_8138125_8138183_8138269_8138349_8138890_8139007_8139113_8139188_8139825_8139919_8140036_8140116_8142358_8142442_8142817_8142877_8142978_8143108_8143259_8143340_8143931_8144033_8144267_8144384_8145096_8145242_8145331_8145436_8145990
Isoform_200262_26	chrX	+	5011	3	FSM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	64	1	64	-1	multi-exon	FALSE	canonical	3	33	junction_2	9.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCATTTTATTTCTTG	NA	False	NA	8	True	AATAAA	-18	NA	9139058	9179488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_9139474_9148235_9148499_9175155
Isoform_200264_9	chrX	+	5209	3	FSM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	-134	1	-134	-1	multi-exon	FALSE	canonical	3	33	junction_2	9.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCATTTTATTTCTTG	NA	False	NA	8	True	AATAAA	-18	NA	9138860	9179488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_9139474_9148235_9148499_9175155
Isoform_200267_124	chrX	+	1746	8	FSM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	-22	9	-22	-9	multi-exon	FALSE	canonical	3	58	junction_5	9.20736173961258	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCTATGTTGTGGTT	NA	False	NA	NA	False	AATAAA	-12	NA	10351374	10462835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
Isoform_200268_11	chrX	+	1732	2	NIC	ENSMUSG00000008035.13	novel	447	2	NA	NA	27	3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGACAAGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	10581284	10585932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_10581307_10584222
Isoform_200269_22	chrX	+	1729	2	FSM	ENSMUSG00000008035.13	ENSMUST00000144356.8	447	2	27	-1309	27	3	multi-exon	FALSE	canonical	3	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGACAAGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	10581284	10585932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_10581307_10584225
Isoform_200272_82	chrX	+	1828	2	FSM	ENSMUSG00000008035.13	ENSMUST00000115524.8	2022	2	198	-4	120	4	multi-exon	FALSE	canonical	3	75	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACAAGTGTGTGTT	1677	False	NA	NA	False	AATAAA	-19	NA	10583826	10585933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_10583944_10584222
Isoform_200273_38	chrX	+	1907	2	FSM	ENSMUSG00000008035.13	ENSMUST00000115524.8	2022	2	118	-3	40	3	multi-exon	FALSE	canonical	3	75	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGACAAGTGTGTGT	1597	False	NA	NA	False	AATAAA	-18	NA	10583746	10585932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_10583944_10584222
Isoform_200274_288	chrX	+	1832	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	198	-11	120	11	multi-exon	FALSE	canonical	3	265	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTGTGTGTTGCTCTTT	1677	False	NA	NA	False	AATAAA	-26	NA	10583826	10585940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_10583944_10584225
Isoform_200275_187	chrX	+	1947	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	76	-4	-2	4	multi-exon	FALSE	canonical	3	265	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACAAGTGTGTGTT	1555	False	NA	NA	False	AATAAA	-19	NA	10583704	10585933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_10583944_10584225
Isoform_200279_1513	chrX	+	2015	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	1	308	1	-308	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTGTCACTGCAATT	NA	False	NA	29	True	AATAAA	-13	NA	12454040	12482980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
Isoform_200283_138	chrX	+	2321	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	1	2	1	-2	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTATGGTTACAGTTTT	NA	False	NA	82	True	AATAAA	-17	NA	12454040	12483286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
Isoform_200293_74	chrX	+	8398	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	-183	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	825	False	NA	NA	False	AATAAA	-27	NA	12937754	13035954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_200294_28	chrX	+	12013	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	820	False	NA	NA	False	AATAAA	-13	NA	12937749	13039564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_200296_72	chrX	+	9632	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	1	1034	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTCCTGTGGTA	808	False	NA	NA	False	AATAGA	-15	NA	12937737	13037171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_200300_62	chrX	+	9610	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-5	1037	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	818	False	NA	NA	False	AATAGA	-18	NA	12937747	13037174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_200304_12	chrX	+	8441	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-39	-182	combination_of_known_junctions	TRUE	canonical	3	336	junction_14	190.839489145418	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTGTATATAGTATATTA	768	False	NA	NA	False	AATAAA	-28	NA	12937697	13035955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_200307_19	chrX	+	11996	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAATTTGGGTTTTTCT	818	False	NA	NA	False	AATAAA	-9	NA	12937747	13039560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_200317_33	chrX	+	10097	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	1035	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	825	False	NA	NA	False	AATAGA	-16	NA	12937754	13037172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_200318_20	chrX	+	8906	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-9	-183	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	798	False	NA	NA	False	AATAAA	-27	NA	12937727	13035954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_20032_3	chr11	+	2912	2	FSM	ENSMUSG00000043999.7	ENSMUST00000109430.2	2926	2	14	0	14	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTGTGTTACCTGCAC	4078	False	NA	NA	False	AATAAA	-24	NA	30835371	30843729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_30835543_30840988
Isoform_200320_20	chrX	+	8881	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	1	-183	intron_retention	FALSE	canonical	3	336	junction_13	184.407752028662	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	808	False	NA	NA	False	AATAAA	-27	NA	12937737	13035954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_200322_14	chrX	+	10073	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	12	1036	intron_retention	FALSE	canonical	3	336	junction_13	184.407752028662	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTGTCCTGTGGTATG	835	False	NA	NA	False	AATAGA	-17	NA	12937764	13037173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_20033_48	chr11	+	1958	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	37	1233	13	138	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCTGGATGTGACTT	NA	False	NA	13	True	AATAAA	-13	NA	30904431	31051471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
Isoform_20034_66	chr11	+	1926	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	69	1233	16	138	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCTGGATGTGACTT	NA	False	NA	13	True	AATAAA	-13	NA	30904463	31051471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
Isoform_20035_7	chr11	+	3166	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	65	-3	12	3	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTATTGTGGTTTTCT	NA	False	NA	NA	False	TATAAA	-17	NA	30904459	31052707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
Isoform_20036_4	chr11	+	2159	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	-165	1234	-165	137	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTGCTGGATGTGACT	NA	False	NA	12	True	AATAAA	-12	NA	30904229	31051470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
Isoform_20038_5	chr11	+	1772	9	NIC	ENSMUSG00000020305.14	novel	3228	10	NA	NA	11	138	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	28.9047465825252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCTGGATGTGACTT	NA	False	NA	13	True	AATAAA	-13	NA	30904458	31051471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_30904570_30948312_30948522_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
Isoform_20039_6	chr11	+	7661	9	FSM	ENSMUSG00000020300.15	ENSMUST00000155278.2	5281	9	-2381	1	-1317	-1	multi-exon	FALSE	canonical	2	5	junction_3	10.3802697460133	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTTTTACTATACTTA	NA	False	NA	2	True	AATAAA	-13	NA	31820893	31885633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_31823413_31839857_31839940_31858824_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
Isoform_2004_5	chr10	-	1867	9	NIC	ENSMUSG00000019813.17	novel	1949	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	67.3060872061361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	398	False	NA	-1	True	AATAAA	-20	NA	41685595	41594841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41621766_41621918_41685568
Isoform_20040_7	chr11	+	7630	8	NIC	ENSMUSG00000020300.15	novel	6303	9	NA	NA	-1337	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	6.8332918532008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTTTTACTATACTTA	NA	False	NA	2	True	AATAAA	-13	NA	31820873	31885633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_31823413_31839857_31839940_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
Isoform_20043_4	chr11	+	2772	5	NNC	ENSMUSG00000020299.7	novel	2000	5	NA	NA	28	-540	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	5.24404424085076	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTGAACAGCAGATGTG	2312	False	NA	NA	False	AATATA	-45	NA	31915619	31929111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_31915952_31923555_31923642_31925036_31926476_31926785_31926831_31928241
Isoform_20044_12	chr11	+	2313	5	FSM	ENSMUSG00000020297.11	ENSMUST00000020537.9	2239	5	-75	1	-75	-1	multi-exon	FALSE	canonical	1	5	junction_2	2.06155281280883	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGACTGTCTGTCCA	NA	False	NA	20	True	AATAAA	-16	NA	31950387	32009201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_31950597_31951730_31951881_31967650_31967735_32005012_32005124_32007442
Isoform_200454_53	chrX	+	4602	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	21	69	21	-69	multi-exon	FALSE	canonical	3	179	junction_1	98.1322449554681	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTCCTTTGTTGTTGTC	NA	False	NA	12	True	AATAAA	-14	NA	13147229	13160222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
Isoform_200455_76	chrX	+	4640	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	52	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	98.1322449554681	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCGTTTGATTGTCCAT	NA	False	NA	18	True	AATAAA	-18	NA	13147260	13160291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
Isoform_20046_4	chr11	+	1729	3	ISM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	45	-6	2	6	intron_retention	FALSE	canonical	3	416	junction_1	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAGCCATAGTACTCTG	NA	False	NA	27	True	AATAAA	-28	NA	32155459	32158990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_32155664_32156959_32157051_32157556
Isoform_200460_167	chrX	+	4571	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	52	69	0	-69	multi-exon	FALSE	canonical	3	179	junction_1	98.1322449554681	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTCCTTTGTTGTTGTC	NA	False	NA	12	True	AATAAA	-14	NA	13147260	13160222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
Isoform_200461_29	chrX	+	4671	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	21	0	21	0	multi-exon	FALSE	canonical	3	179	junction_1	98.1322449554681	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCGTTTGATTGTCCAT	NA	False	NA	18	True	AATAAA	-18	NA	13147229	13160291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
Isoform_200465_13	chrX	+	4885	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	-193	0	-193	0	multi-exon	TRUE	canonical	3	179	junction_1	98.1322449554681	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCGTTTGATTGTCCAT	NA	False	NA	18	True	AATAAA	-18	NA	13147015	13160291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
Isoform_20047_267	chr11	+	794	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	28	-1	-3	1	multi-exon	FALSE	canonical	3	400	junction_3	16.768646337734	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAGAAAGCCATAGTA	NA	False	NA	22	True	AATAAA	-23	NA	32155442	32158985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
Isoform_20048_3	chr11	+	2091	4	NIC	ENSMUSG00000040767.11	novel	770	4	NA	NA	-12	0	intron_retention	FALSE	canonical	2	5	junction_1	195.77708412035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	False	NA	21	True	AATAAA	-22	NA	32155433	32158984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32157044_32157556_32157663_32158333_32158409_32158684
Isoform_2005_5	chr10	-	2069	10	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	73.8257875920078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	368	False	NA	4	True	AATAAA	-25	NA	41685625	41594836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685568
Isoform_20052_366	chr11	+	1069	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	-8	676	-2	2	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176502	32182024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
Isoform_200524_200	chrX	+	1959	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	134	2074	134	-2074	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTAGCATCCAATG	NA	False	NA	10	True	AATAAA	-20	NA	16486070	16551983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
Isoform_200525_28	chrX	+	3221	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	-1128	2074	-1128	-2074	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTAGCATCCAATG	NA	False	NA	10	True	AATAAA	-20	NA	16484808	16551983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
Isoform_200528_30	chrX	+	3131	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	-1128	2164	-1128	-2164	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTCTGGATTCTGTTT	NA	False	NA	9	True	AATAAA	-43	NA	16484808	16551893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
Isoform_200535_6	chrX	+	4033	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	134	0	134	0	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGGCTTCTCTGATTTG	NA	False	NA	21	True	AATAAA	-22	NA	16486070	16554057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
Isoform_200538_14	chrX	+	5585	30	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	0	-421	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	47.6051186808053	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTCTATTGTTTGA	NA	False	NA	3	True	ATTAAA	-16	NA	18028881	18145754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_200539_10	chrX	+	5613	30	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-23	-422	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	47.6051186808053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18028852	18145753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_20054_22	chr11	+	1733	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	4	0	4	0	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGCACGCGTGTGT	NA	False	NA	6	True	NA	NA	NA	32176514	32182700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
Isoform_200542_85	chrX	+	5451	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	46	421	-16	-421	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTCTATTGTTTGA	NA	False	NA	3	True	ATTAAA	-16	NA	18028859	18145754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_200547_7	chrX	+	5785	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	-14	147	-14	-147	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTAAAATGTCAGACTGG	NA	False	NA	3	True	AATATA	-19	NA	18028799	18146028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_200552_6	chrX	+	5916	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	2	0	2	0	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGACTCATCATTTTTT	NA	False	NA	NA	False	AATACA	-17	NA	18028815	18146175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_200553_5	chrX	+	5494	29	FSM	ENSMUSG00000037369.18	ENSMUST00000052368.9	5935	29	22	419	22	-419	multi-exon	FALSE	canonical	3	24	junction_28	44.1203710643637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18028835	18145756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
Isoform_200555_12	chrX	+	5496	29	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	21	-422	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	44.6303982614943	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18028834	18145753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_20056_12	chr11	+	2103	3	NIC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	-2	2	intron_retention	FALSE	canonical	3	350	junction_1	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176502	32182024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32177950_32179848_32180054_32181573
Isoform_200560_3	chrX	+	5477	29	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	-2	-419	combination_of_known_junctions	FALSE	canonical	3	24	junction_28	53.1090522281412	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18028873	18145756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
Isoform_200561_22	chrX	+	5337	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	25	-421	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	40.8616387994563	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTCTATTGTTTGA	NA	False	NA	3	True	ATTAAA	-16	NA	18028838	18145754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_200565_3	chrX	+	5359	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-23	-421	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	47.2446860149684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTCTATTGTTTGA	NA	False	NA	3	True	ATTAAA	-16	NA	18028852	18145754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_200570_18	chrX	+	2223	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	-19	2	-19	-2	multi-exon	FALSE	canonical	3	12	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTCTATCTAGTGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	19925779	19963758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_19927448_19963203
Isoform_200571_9	chrX	+	2142	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	-50	114	-50	-114	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGCCTCACCCAGCTC	NA	False	NA	NA	False	AATAAA	-22	NA	19925748	19963646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_19927448_19963203
Isoform_200572_3	chrX	+	4723	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	-50	-2467	-50	2467	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGGAAAATTTTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	19925748	19966227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_19927448_19963203
Isoform_200575_312	chrX	+	4335	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	86	-4	8	0	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTCTATACTTTGTT	NA	False	NA	7	True	AATAAA	-22	NA	20230805	20267096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
Isoform_200576_383	chrX	+	3600	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	86	731	8	-731	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCAATGCTACTTTTTT	NA	False	NA	7	True	NA	NA	NA	20230805	20266361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
Isoform_20058_3	chr11	+	556	3	FSM	ENSMUSG00000069919.8	ENSMUST00000093209.4	699	3	164	-21	-136	21	multi-exon	FALSE	canonical	1	2	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCATGCCTGGTTCTCT	7161	False	NA	NA	False	AATAAA	-17	NA	32233674	32234486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32233802_32233923_32234129_32234262
Isoform_200589_61	chrX	+	4804	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	61	1	32	-1	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTCAGTGTGATGAT	NA	False	NA	8	True	ATTAAA	-16	NA	20291987	20386177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
Isoform_20059_10	chr11	+	3522	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	-9	3900	-9	-3900	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGGTCCATGAGTGCTT	262	False	NA	NA	False	NA	NA	NA	32297810	32374273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
Isoform_200590_239	chrX	+	4762	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	102	2	2	-2	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTCAGTGTGATGA	NA	False	NA	7	True	ATTAAA	-15	NA	20292028	20386176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
Isoform_200591_19	chrX	+	5052	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	-187	1	-187	-1	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTCAGTGTGATGAT	NA	False	NA	8	True	ATTAAA	-16	NA	20291739	20386177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
Isoform_200593_7	chrX	+	4672	12	NIC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	48.0988994908553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCTCTGTCAGTGTGAT	NA	False	NA	5	True	ATTAAA	-13	NA	20292028	20386174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20292070_20295261_20295371_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
Isoform_2006_4	chr10	-	2178	11	NIC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_10	85.3035169263261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	369	False	NA	-1	True	AATAAA	-20	NA	41685624	41594841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
Isoform_200602_246	chrX	+	3407	24	NIC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-19	1	combination_of_known_junctions	TRUE	canonical	3	108	junction_4	89.4718170663217	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	536	False	NA	29	True	AATAAA	-17	NA	20484002	20517128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_200605_214	chrX	+	3405	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115374.8	3564	24	147	12	-14	1	multi-exon	FALSE	canonical	3	108	junction_4	93.2983708932913	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	541	False	NA	29	True	AATAAA	-17	NA	20484007	20517128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_200610_335	chrX	+	3176	23	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	194	junction_9	67.1727297333874	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	536	False	NA	29	True	AATAAA	-17	NA	20484002	20517128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_200613_280	chrX	+	3131	23	FSM	ENSMUSG00000031060.17	ENSMUST00000084383.10	3172	23	29	12	27	1	multi-exon	FALSE	canonical	3	151	junction_9	72.7799809002085	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	584	False	NA	29	True	AATAAA	-17	NA	20484050	20517128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_200615_19	chrX	+	3093	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	100.321998591339	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	545	False	NA	29	True	AATAAA	-17	NA	20484011	20517128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_200616_20	chrX	+	3100	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-14	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	104.114689072799	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	541	False	NA	29	True	AATAAA	-17	NA	20484007	20517128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_200633_3055	chrX	+	3473	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	96	475	1	-475	multi-exon	FALSE	canonical	3	1167	junction_1	494.469940036804	3055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524660	20548943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
Isoform_200634_365	chrX	+	3507	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	62	475	-33	-475	multi-exon	TRUE	canonical	3	1167	junction_1	494.469940036804	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524626	20548943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
Isoform_20064_3	chr11	+	6908	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	-32	537	-32	-537	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGTGTCCGGATTATGC	239	False	NA	NA	False	AATAAA	-15	NA	32297787	32377636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
Isoform_200640_1016	chrX	+	3589	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	7	475	7	-475	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529143	20548943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
Isoform_200641_4866	chrX	+	3563	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	33	475	33	-475	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	4866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529169	20548943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
Isoform_20066_129	chr11	+	3018	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	15	-2021	15	2021	multi-exon	FALSE	canonical	3	148	junction_1	5	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTCTTTGCCATTA	4496	False	NA	12	True	TTTAAA	-18	NA	32405384	32468708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32405547_32449224_32449462_32466089
Isoform_200689_60	chrX	+	3225	16	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	24	-2	intron_retention	FALSE	canonical	3	35	junction_2	413.425602604494	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGGTTATAAATCATC	2348	False	NA	16	True	ATTAAA	-18	NA	20554680	20566117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
Isoform_200696_2572	chrX	+	3093	16	FSM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	25	2	25	-2	multi-exon	FALSE	canonical	3	1538	junction_15	84.886172149663	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGGTTATAAATCATC	2349	False	NA	16	True	ATTAAA	-18	NA	20554681	20566117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
Isoform_200697_705	chrX	+	3123	16	FSM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	-5	2	-5	-2	multi-exon	FALSE	canonical	3	1538	junction_15	84.886172149663	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGGTTATAAATCATC	2319	False	NA	16	True	ATTAAA	-18	NA	20554651	20566117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
Isoform_2007_43	chr10	-	2114	10	ISM	ENSMUSG00000019813.17	ENSMUST00000189770.7	2232	11	239	3	1	2	3prime_fragment	FALSE	canonical	3	43	junction_4	55.5797724996344	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	368	False	NA	1	True	AATAAA	-22	NA	41685625	41594839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
Isoform_200704_54	chrX	+	3178	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	-2	intron_retention	FALSE	canonical	3	1538	junction_14	85.3986151491214	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGGTTATAAATCATC	2349	False	NA	16	True	ATTAAA	-18	NA	20554681	20566117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
Isoform_200712_68	chrX	+	3580	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1538	junction_13	90.6073523931271	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGGTTATAAATCATC	2323	False	NA	16	True	ATTAAA	-18	NA	20554655	20566117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
Isoform_20072_52	chr11	+	5061	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	-28	-7	-28	7	multi-exon	FALSE	canonical	3	12	junction_8	17.3190824607989	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTGTTGTTCTTTCTGG	NA	False	NA	8	True	AATAAA	-19	NA	32483276	32574594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
Isoform_20073_5	chr11	+	5125	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	-92	-7	-92	7	multi-exon	TRUE	canonical	3	12	junction_8	17.3190824607989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTGTTGTTCTTTCTGG	NA	False	NA	8	True	AATAAA	-19	NA	32483212	32574594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
Isoform_200733_14	chrX	+	3517	22	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	70.5175554282958	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTTTGAGTGTTT	NA	False	NA	4	True	NA	NA	NA	20570166	20586779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
Isoform_200739_331	chrX	+	3444	21	FSM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	22	1	-6	1	multi-exon	FALSE	canonical	3	183	junction_13	34.5694590643244	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTAGCTGTTTTGAGTGT	NA	False	NA	2	True	NA	NA	NA	20570166	20586777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
Isoform_20075_6	chr11	+	597	3	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	10	-38787	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	15	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATTTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	32483314	32509741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_32483560_32505123_32505289_32509554
Isoform_200750_74	chrX	+	2352	16	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	-3	0	combination_of_known_junctions	TRUE	non_canonical	1	66	junction_12	96.2243674382372	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	1120	False	NA	23	True	NA	NA	NA	20664049	20726758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
Isoform_200753_111	chrX	+	1533	6	FSM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	-2	-11	1	-4	multi-exon	FALSE	canonical	3	219	junction_1	64.9935381403413	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTATCTTTGTCCTTCAT	6306	False	NA	NA	False	AATAAA	-23	NA	20714814	20719139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
Isoform_200756_11	chrX	+	2484	15	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	33	0	1	0	intron_retention	FALSE	non_canonical	1	66	junction_12	90.2516040899901	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6306	False	NA	23	True	NA	NA	NA	20714814	20726758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923
Isoform_200757_293	chrX	+	2326	16	FSM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	33	-1	1	1	multi-exon	FALSE	non_canonical	1	66	junction_12	87.7031356337959	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTTTATTTTGC	6306	False	NA	24	True	NA	NA	NA	20714814	20726759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
Isoform_200761_11	chrX	+	2299	16	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	1	12	junction_13	103.468642592816	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6308	False	NA	23	True	NA	NA	NA	20714816	20726758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20725004_20725113_20725923_20726059_20726217
Isoform_200762_11	chrX	+	966	7	NNC	ENSMUSG00000001127.13	novel	1474	11	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	124.993333155546	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTATCTTTGTCCTTCA	6305	False	NA	NA	False	AATAAA	-22	NA	20714813	20719138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20718834
Isoform_200767_41	chrX	+	878	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	-47	2	8	0	multi-exon	FALSE	canonical	3	257	junction_1	211.264384125673	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736412	20740972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
Isoform_200769_60	chrX	+	809	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	22	2	22	0	multi-exon	FALSE	canonical	3	257	junction_1	211.264384125673	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736481	20740972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
Isoform_200770_272	chrX	+	764	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	119	0	64	0	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736523	20740972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
Isoform_200771_89	chrX	+	875	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	8	0	8	0	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736412	20740972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
Isoform_200773_7	chrX	+	725	5	NIC	ENSMUSG00000001131.12	novel	883	6	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	293.187226870476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATATTTCTGTATAGTG	NA	False	NA	15	True	AATAAA	-16	NA	20736481	20740971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_20736564_20737272_20737402_20739288_20739416_20739606_20739732_20740709
Isoform_200777_4	chrX	+	1705	6	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-12	608	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	62.2427505818951	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20827910	20853584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_20827952_20828088_20828218_20828775_20828835_20833967_20834048_20851664_20851705_20852228
Isoform_200779_3	chrX	+	4091	21	NNC	ENSMUSG00000036769.15	novel	4002	21	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.7474574079738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGATTGTCTTAATTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	23559291	23672237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_23559509_23559590_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
Isoform_200780_55	chrX	+	4159	20	FSM	ENSMUSG00000036769.15	ENSMUST00000035766.13	4167	20	12	-4	12	4	multi-exon	FALSE	canonical	3	33	junction_8	9.86248944541599	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGATTGTCTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	23559301	23672233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
Isoform_200782_3	chrX	+	6877	55	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-153	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_53	30.6312698293431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAAGTGAAGGAAATAAT	NA	False	NA	10	True	AATAAA	-22	NA	35152331	35340217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339569_35339588_35339751
Isoform_200783_3	chrX	+	6761	55	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-33	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_53	30.6312698293431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAAGGAAATAATTCTT	NA	False	NA	14	True	AATAAA	-26	NA	35152451	35340221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339569_35339588_35339751
Isoform_200784_31	chrX	+	6863	54	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-159	0	combination_of_known_junctions	TRUE	canonical	1	53	junction_53	22.4821593760484	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCGAAGTGAAGGAAATA	NA	False	NA	8	True	AATAAA	-20	NA	35152325	35340215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
Isoform_200785_74	chrX	+	6702	54	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	53	junction_53	22.4821593760484	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCGAAGTGAAGGAAATA	NA	False	NA	8	True	AATAAA	-20	NA	35152486	35340215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
Isoform_200787_67	chrX	+	6697	53	FSM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	-32	0	-32	0	multi-exon	FALSE	canonical	1	53	junction_52	21.5813446724207	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCGAAGTGAAGGAAATA	NA	False	NA	8	True	AATAAA	-20	NA	35152452	35340215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
Isoform_200788_23	chrX	+	6803	53	FSM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	-138	0	-138	0	multi-exon	FALSE	canonical	1	53	junction_52	21.5813446724207	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCGAAGTGAAGGAAATA	NA	False	NA	8	True	AATAAA	-20	NA	35152346	35340215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
Isoform_200792_73	chrX	+	3712	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	1	-1	1	1	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTTTTTTTTTGGTCT	NA	False	NA	NA	False	AATAAA	-25	NA	35375763	35434913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
Isoform_200793_13	chrX	+	3757	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	-47	2	-47	-2	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAATGCTTTTTTTTTTGG	NA	False	NA	NA	False	AATAAA	-22	NA	35375715	35434910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
Isoform_200801_24	chrX	+	7365	11	FSM	ENSMUSG00000016239.12_ENSMUSG00000119926.1	ENSMUST00000016383.10	2911	11	61	-4515	61	2854	multi-exon	FALSE	canonical	3	28	junction_3	7.36478105580879	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTCTACCAAAGTGT	NA	False	NA	7	True	ATTAAA	-16	NA	35592066	35630509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_35593053_35596168_35596288_35598864_35598988_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
Isoform_200803_991	chrX	+	1853	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	3	1	3	-1	multi-exon	FALSE	canonical	3	454	junction_1	42	991	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTGAGGCTTTCATTT	1671	False	NA	NA	False	AATAAA	-14	NA	35861861	35869731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_35862268_35865773_35865930_35868440
Isoform_20081_56	chr11	+	4106	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	13	-79	combination_of_known_splicesites	FALSE	canonical	3	66	junction_2	141.20424587545	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGACCTGGCTTCCTGG	NA	False	NA	32	True	AATAAA	-44	NA	32592736	32696710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_200813_7	chrX	+	1153	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	-21	-21	-21	21	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAGAAGTGCAGCAATC	NA	False	NA	NA	False	AATAAA	-17	NA	36007290	36040876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
Isoform_200814_3	chrX	+	1472	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	51	-412	-1	412	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	36007362	36041267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
Isoform_200818_12909	chrX	+	1234	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	0	6	0	-6	multi-exon	FALSE	canonical	3	11014	junction_3	650.055895032625	12909	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGTTTTGTTCGTTGT	NA	False	NA	23	True	AATAAA	-25	NA	36059303	36062454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
Isoform_20082_27	chr11	+	4182	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	17	1	combination_of_known_splicesites	FALSE	canonical	3	66	junction_2	141.20424587545	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTGTCACATTTCTC	NA	False	NA	5	True	AATAAA	-16	NA	32592740	32696790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_20083_41	chr11	+	4022	13	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	-19	-72	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	145.006225919978	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTCCTGGCGATTGT	NA	False	NA	39	True	AATAAA	-30	NA	32592764	32696717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32592936_32602747_32602905_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_200834_5	chrX	-	924	2	Antisense	novelGene_ENSMUSG00000084990.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGAGCTGTTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	36080739	36078420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_-_36078984_36080378
Isoform_200835_28	chrX	-	1256	7	NIC	ENSMUSG00000006423.16	novel	678	3	NA	NA	19	8969	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	75.5389891968968	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGAGCTGTTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	36127872	36078420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_36078984_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
Isoform_200837_465	chrX	+	703	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	65	964	2	3	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCCTTGGCAAG	NA	False	NA	31	True	ATTAAA	-23	NA	36138012	36146911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
Isoform_200838_94	chrX	+	1664	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	65	3	2	-3	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGTTCACACTTTTA	NA	False	NA	4	True	AATAAA	-13	NA	36138012	36147872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
Isoform_200839_174	chrX	+	729	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	36	967	0	0	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTCTTCCCTTGGC	NA	False	NA	28	True	ATTAAA	-20	NA	36137983	36146908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
Isoform_200840_36	chrX	+	1693	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	36	3	0	-3	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGTTCACACTTTTA	NA	False	NA	4	True	AATAAA	-13	NA	36137983	36147872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
Isoform_200844_8	chrX	+	931	5	FSM	ENSMUSG00000016308.13	ENSMUST00000202812.2	719	5	-322	110	0	21	multi-exon	FALSE	canonical	3	845	junction_1	46.1702014290603	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTCTTCCCCTTTCTG	NA	False	NA	49	True	ATTAAA	-41	NA	36137983	36146929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
Isoform_20085_36	chr11	+	4049	13	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	12	-74	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	145.006225919978	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGCTTCCTGGCGATT	NA	False	NA	37	True	AATAAA	-28	NA	32592735	32696715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32592936_32602747_32602905_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_200852_608	chrX	+	4227	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-6	9	-6	-9	multi-exon	TRUE	canonical	3	360	junction_3	33.4381425171914	608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTTTCATATTTTTAAT	NA	False	NA	15	True	AATAAA	-15	NA	36390441	36414390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
Isoform_200859_3	chrX	+	824	5	FSM	ENSMUSG00000051827.12	ENSMUST00000173650.2	735	5	1	-90	1	3	multi-exon	FALSE	canonical	1	4	junction_3	65.4618209340376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATTTGTTTTGTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36508651	36513342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36508740_36508901_36509314_36510828_36510875_36511141_36511191_36513113
Isoform_200860_55	chrX	+	796	4	FSM	ENSMUSG00000051827.12	ENSMUST00000063340.12	795	4	2	-3	2	3	multi-exon	FALSE	canonical	3	47	junction_3	56.8174464598878	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATTTGTTTTGTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36508630	36513342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36508740_36508901_36509314_36510828_36510875_36513113
Isoform_200861_5	chrX	+	957	3	NIC	ENSMUSG00000051827.12	novel	795	4	NA	NA	2	2	intron_retention	FALSE	canonical	3	47	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACATTTGTTTTGTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	36508630	36513341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_36509314_36510828_36510875_36513113
Isoform_200863_3	chrX	+	703	4	NNC	ENSMUSG00000079638.9	novel	799	4	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	29.4392028877595	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	36593734	36598461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_36593831_36593992_36594405_36595944_36595991_36598312
Isoform_200864_3	chrX	+	850	5	NNC	ENSMUSG00000079638.9	novel	799	4	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	28.743477520996	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	36593718	36598460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_36593831_36593992_36594405_36595944_36595991_36596258_36596308_36598229
Isoform_200865_5	chrX	+	968	3	NIC	ENSMUSG00000079638.9	novel	799	4	NA	NA	-7	0	intron_retention	FALSE	canonical	3	16	junction_2	18.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTTTTGTGCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36593712	36598459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_36594405_36595944_36595991_36598229
Isoform_200866_3	chrX	+	847	5	FSM	ENSMUSG00000079637.11	ENSMUST00000184688.8	720	5	-34	-93	-34	2	multi-exon	FALSE	canonical	2	3	junction_3	22.1585198061603	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	36635298	36640034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36635407_36635568_36635981_36637508_36637555_36637822_36637872_36639802
Isoform_200868_4	chrX	+	807	4	FSM	ENSMUSG00000095698.3	ENSMUST00000115179.4	685	4	-32	-90	-32	90	multi-exon	FALSE	canonical	3	16	junction_2	8.9938250421547	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTTGTTTTGTGCTTC	6857	False	NA	NA	False	AATAAA	-15	NA	36675048	36679366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36675169_36675331_36675744_36677299_36677346_36679137
Isoform_200869_7	chrX	+	846	5	FSM	ENSMUSG00000096788.9	ENSMUST00000184746.2	735	5	-20	-91	2	0	multi-exon	FALSE	canonical	1	2	junction_3	31.4523449046331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTTTTGTGCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36712106	36723466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36721255_36721305_36723236
Isoform_200870_22	chrX	+	807	4	FSM	ENSMUSG00000096788.9	ENSMUST00000072167.10	799	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	15	junction_3	24.1246761636296	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTTTTGTGCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36712096	36723466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36723236
Isoform_200875_805	chrX	+	860	6	FSM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	31	2	31	-2	multi-exon	FALSE	canonical	3	2792	junction_1	493.533626007388	805	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTTAGTGATTCGAGT	8536	False	NA	15	True	ATTAAA	-12	NA	36891666	36897306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
Isoform_20088_16	chr11	+	3995	14	FSM	ENSMUSG00000020271.18	ENSMUST00000076383.8	4019	14	-129	153	22	94	multi-exon	FALSE	canonical	3	19	junction_2	161.467713445156	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTGCTAAGTAATGTCA	NA	False	NA	-15	True	AATAAA	-25	NA	32592745	32696663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32592936_32630200_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_200883_125	chrX	+	870	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	137	3	137	-3	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGGCTCCATTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	36915923	36918731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
Isoform_200884_28	chrX	+	920	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	87	3	87	-3	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGGCTCCATTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	36915873	36918731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
Isoform_200885_24	chrX	+	1014	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	-7	3	-7	-3	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGGCTCCATTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	36915779	36918731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
Isoform_200888_4	chrX	+	1616	4	NIC	ENSMUSG00000071767.5	novel	409	3	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_2	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTCAGGTGTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36926736	36930150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_36926871_36927028_36928246_36928868_36928915_36929931
Isoform_200890_72	chrX	+	913	3	FSM	ENSMUSG00000050197.6	ENSMUST00000152730.4	876	3	-37	0	-37	0	multi-exon	FALSE	canonical	3	73	junction_1	2	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTAATTTTATGTGC	NA	False	NA	2	True	AATAAA	-15	NA	37210058	37218844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_37210700_37211950_37211997_37218618
Isoform_200892_3	chrX	+	5179	2	FSM	ENSMUSG00000048047.4	ENSMUST00000049740.3	5122	2	-60	3	-60	-3	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTGAGTGATTTTTT	NA	False	NA	2	True	AATAAA	-13	NA	37278609	37285920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_37278960_37281091
Isoform_200893_102	chrX	+	880	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	0	-97	0	97	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGACTCAATGTCCTA	NA	False	NA	9	True	ATTAAA	-22	NA	37689531	37702400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_200894_108	chrX	+	782	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	0	1	0	-1	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTAGTTTCAGAAA	NA	False	NA	16	True	AATAAA	-18	NA	37689531	37702302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_200895_26	chrX	+	938	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-58	-97	19	97	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGACTCAATGTCCTA	NA	False	NA	9	True	ATTAAA	-22	NA	37689473	37702400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_200897_10	chrX	+	1078	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-200	-95	-123	95	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGATGACTCAATGTCC	NA	False	NA	7	True	ATTAAA	-20	NA	37689331	37702398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_200898_11	chrX	+	982	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-200	1	-123	-1	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTAGTTTCAGAAA	NA	False	NA	16	True	AATAAA	-18	NA	37689331	37702302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_20090_20	chr11	+	3967	13	FSM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	-108	79	-26	-79	multi-exon	FALSE	canonical	3	26	junction_2	161.315167710086	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGACCTGGCTTCCTGG	NA	False	NA	32	True	AATAAA	-44	NA	32592757	32696710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32592936_32630200_32630303_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_200901_10	chrX	+	640	5	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	253.564094461341	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTAGTTTCAGAAA	NA	False	NA	16	True	AATAAA	-18	NA	37689520	37702302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_37689656_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_200902_8	chrX	+	727	5	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	97	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	253.564094461341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGACTCAATGTCCTA	NA	False	NA	9	True	ATTAAA	-22	NA	37689531	37702400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_37689656_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_200903_5	chrX	+	1226	6	NIC	ENSMUSG00000000355.14	novel	764	4	NA	NA	176	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	233.438985604376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTTTCAGAAAT	NA	False	NA	17	True	AATAAA	-19	NA	37689707	37702303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_200905_54	chrX	+	6395	8	FSM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	154	-7	72	7	multi-exon	FALSE	canonical	3	44	junction_1	28.7345344383332	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTTGTATTTGATTT	NA	False	NA	25	True	AATAAA	-21	NA	41156866	41198540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
Isoform_200906_7	chrX	+	6458	8	FSM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	91	-7	9	7	multi-exon	FALSE	canonical	3	44	junction_1	28.7345344383332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTTGTATTTGATTT	NA	False	NA	25	True	AATAAA	-21	NA	41156803	41198540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
Isoform_200908_7	chrX	+	6389	8	NIC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	72	6	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	38.1292110421115	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTGTATTTGATT	NA	False	NA	24	True	AATAAA	-20	NA	41156866	41198539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_41156934_41157233_41157360_41183248_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
Isoform_200909_3	chrX	+	6456	8	NIC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	7	8	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	38.1292110421115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41156801	41198541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_41156934_41157233_41157360_41183248_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
Isoform_200910_6	chrX	+	5555	7	NIC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	7	8	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	42.5535610208541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41156801	41198541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_41156934_41157233_41157360_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
Isoform_200911_9	chrX	+	5489	7	NIC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	72	7	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	42.5535610208541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTTGTATTTGATTT	NA	False	NA	25	True	AATAAA	-21	NA	41156866	41198540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_41156934_41157233_41157360_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
Isoform_200916_12	chrX	+	6611	7	FSM	ENSMUSG00000025860.16	ENSMUST00000115095.9	6670	7	66	-7	54	7	multi-exon	FALSE	canonical	3	22	junction_1	35.08283847632	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTTGTATTTGATTT	NA	False	NA	25	True	AATAAA	-21	NA	41157340	41198540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_41157750_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
Isoform_20092_197	chr11	+	3956	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	13	-148	13	-72	multi-exon	FALSE	canonical	3	196	junction_1	93.3590738314529	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTCCTGGCGATTGT	NA	False	NA	39	True	AATAAA	-30	NA	32592736	32696717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_200928_16	chrX	+	6071	33	FSM	ENSMUSG00000025862.15	ENSMUST00000115072.8	5955	33	-105	-11	-10	1	multi-exon	FALSE	canonical	3	50	junction_1	32.1178858854377	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATCTCTTGTAATCA	NA	False	NA	20	True	AATAAA	-23	NA	41238183	41366063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
Isoform_200929_3	chrX	+	4999	33	FSM	ENSMUSG00000025862.15	ENSMUST00000115072.8	5955	33	-143	1099	-48	-1099	multi-exon	FALSE	canonical	3	50	junction_1	32.1178858854377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTATGTTTGCAGAAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	41238145	41364953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
Isoform_20093_69	chr11	+	4031	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	13	-223	13	3	multi-exon	FALSE	canonical	3	196	junction_1	93.3590738314529	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTCACATTTCTCAG	NA	False	NA	7	True	AATAAA	-18	NA	32592736	32696792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_200932_25	chrX	+	5949	34	NIC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-19	4	combination_of_known_junctions	FALSE	canonical	3	63	junction_30	34.473955780863	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATGCTTTATCTCTT	NA	False	NA	13	True	AATAAA	-16	NA	41239558	41366056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
Isoform_200937_55	chrX	+	5825	33	FSM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	-11	11	-11	-1	multi-exon	FALSE	canonical	3	102	junction_1	27.0432957264827	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGTTGTATGCTTTAT	NA	False	NA	8	True	AATAAA	-11	NA	41239566	41366051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
Isoform_200943_3	chrX	+	5850	34	NIC	ENSMUSG00000025862.15	novel	294	3	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	42.0706694798964	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41239907	41366052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_41239966_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
Isoform_200951_26	chrX	+	5131	24	FSM	ENSMUSG00000001173.16	ENSMUST00000001202.15	5253	24	119	3	39	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	28.8803018275155	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCATTGTGATCTGACT	NA	False	NA	14	True	AATAAA	-15	NA	47001382	47054742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
Isoform_200952_25	chrX	+	5180	24	FSM	ENSMUSG00000001173.16	ENSMUST00000001202.15	5253	24	70	3	2	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	28.8803018275155	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCATTGTGATCTGACT	NA	False	NA	14	True	AATAAA	-15	NA	47001333	47054742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
Isoform_200953_72	chrX	+	5161	23	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-3	-3	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	25.9866860380401	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCATTGTGATCTGACT	NA	False	NA	14	True	AATAAA	-15	NA	47001328	47054742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
Isoform_200957_21	chrX	+	3216	21	FSM	ENSMUSG00000037005.17	ENSMUST00000077775.11	3498	21	-28	310	-28	1	multi-exon	FALSE	canonical	3	24	junction_11	7.3109506905737	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTGTGGGCAGACTCT	NA	False	NA	NA	False	ATTAAA	-28	NA	47197573	47225548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
Isoform_200959_21	chrX	+	3091	21	FSM	ENSMUSG00000037005.17	ENSMUST00000077775.11	3498	21	97	310	97	1	multi-exon	FALSE	canonical	3	24	junction_11	7.3109506905737	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTGTGGGCAGACTCT	NA	False	NA	NA	False	ATTAAA	-28	NA	47197698	47225548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
Isoform_200960_3	chrX	+	3323	21	FSM	ENSMUSG00000037005.17	ENSMUST00000077775.11	3498	21	-135	310	-135	1	multi-exon	TRUE	canonical	3	24	junction_11	7.3109506905737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTGTGGGCAGACTCT	NA	False	NA	NA	False	ATTAAA	-28	NA	47197466	47225548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
Isoform_200962_19	chrX	+	2654	8	FSM	ENSMUSG00000031101.7	ENSMUST00000033427.7	2677	8	22	1	22	-1	multi-exon	FALSE	canonical	1	3	junction_3	1.30930734141595	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACCGTCGCCTGTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	47235334	47250441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47235595_47243402_47243499_47243852_47244000_47246295_47246438_47247609_47247759_47247918_47248129_47248280_47248432_47248942
Isoform_200963_5	chrX	+	2639	8	NNC	ENSMUSG00000031101.7	novel	2677	8	NA	NA	39	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	1.67819144635296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTACCGTCGCCTGTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	47235351	47250440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_47235595_47243402_47243499_47243852_47244000_47246295_47246438_47247609_47247759_47247918_47248129_47248280_47248432_47248939
Isoform_200975_385	chrX	+	2473	15	FSM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	31	3	-4	-3	multi-exon	FALSE	canonical	3	320	junction_8	49.1840047833705	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	17	True	AATAAA	-21	NA	47345769	47371327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
Isoform_200978_23	chrX	+	1424	10	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	130.820015835536	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	17	True	AATAAA	-21	NA	47345735	47371327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47367243_47367438_47367544_47367645_47370938
Isoform_200987_5	chrX	+	2338	12	NIC	ENSMUSG00000036959.16	novel	7360	14	NA	NA	-46	-373	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	9.12991631401003	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAGTGACTGGATTCCT	NA	False	NA	21	True	NA	NA	NA	47432600	47495213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_47432767_47450409_47450540_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
Isoform_200988_7	chrX	+	1194	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	-34	-2	-34	2	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGCTTTGTGTCTTGC	NA	False	NA	8	True	AATAAA	-16	NA	47608127	47619111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47608736_47618525
Isoform_200989_14	chrX	+	988	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	171	-1	171	1	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGTGGCTTTGTGTCTTG	NA	False	NA	7	True	AATAAA	-15	NA	47608332	47619110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47608736_47618525
Isoform_200990_13	chrX	+	1479	11	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	44	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.2180673730426	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTTGACTTTGTCTTC	NA	False	NA	13	True	ATTAAA	-16	NA	47712333	47751170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_47712386_47712550_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
Isoform_200991_4	chrX	+	1583	11	FSM	ENSMUSG00000031105.17	ENSMUST00000033431.14	1760	11	175	2	4	0	multi-exon	FALSE	canonical	1	2	junction_2	43.9708994677161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	False	NA	12	True	ATTAAA	-15	NA	47712629	47751169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47712706_47712838_47713075_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
Isoform_200992_5	chrX	+	1431	12	NIC	ENSMUSG00000031105.17	novel	1862	13	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	47.4155186089816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTTGACTTTGTCTTC	NA	False	NA	13	True	ATTAAA	-16	NA	47712639	47751170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_47712706_47714472_47714518_47717012_47717061_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
Isoform_200993_48	chrX	+	1337	10	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	17.3254968040219	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTTGACTTTGTCTTC	NA	False	NA	13	True	ATTAAA	-16	NA	47712640	47751170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
Isoform_200996_297	chrX	+	1660	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	87	0	87	0	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	False	NA	NA	False	NA	NA	NA	47783967	47799600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
Isoform_200997_35	chrX	+	1719	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	21	7	21	-7	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTCGGGGCATTTGGT	NA	False	NA	NA	False	NA	NA	NA	47783901	47799593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
Isoform_201_57	ERCC-00162	+	505	1	FSM	ERCC-00162A	DQ516750	507	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00162_+_0_500
Isoform_2010_9	chr10	-	2299	10	NNC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-5616	1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_9	71.4082334361321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	5896	False	NA	0	True	AATAAA	-21	NA	41628250	41594840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
Isoform_20100_54	chr11	+	3947	12	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	29	-2	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTTCTGTCACATTT	NA	False	NA	2	True	AATAAA	-13	NA	32592752	32696787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_201002_57	chrX	+	3325	12	FSM	ENSMUSG00000031112.11	ENSMUST00000033444.11	3639	12	314	0	-80	0	multi-exon	TRUE	canonical	3	20	junction_11	5.29618605950164	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCCTCGATGTTTGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49930237	49981974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_49930424_49930555_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
Isoform_201003_53	chrX	+	1590	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	-30	-24	-30	24	multi-exon	FALSE	canonical	3	142	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAAATATGCCTGTG	NA	False	NA	NA	False	CATAAA	-20	NA	51880046	51888369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_51880203_51886935
Isoform_201004_80	chrX	+	1514	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	25	-3	25	3	multi-exon	FALSE	canonical	3	142	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCCTGTGATTCTTG	NA	False	NA	NA	False	AATAAA	-26	NA	51880101	51888348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_51880203_51886935
Isoform_201007_379	chrX	+	4341	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	9	0	9	0	multi-exon	FALSE	canonical	3	199	junction_10	29.4423164849507	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	False	NA	17	True	AATAAA	-17	NA	52001151	52045820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
Isoform_20101_203	chr11	+	3887	12	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	12	-79	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGACCTGGCTTCCTGG	NA	False	NA	32	True	AATAAA	-44	NA	32592735	32696710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_201012_1912	chrX	+	1319	9	FSM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	-31	1	-31	-1	multi-exon	FALSE	canonical	3	2155	junction_4	129.05328356923	1912	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCACTTTTTGAATTCTT	NA	False	NA	11	True	AATAAA	-15	NA	52076982	52110535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
Isoform_20102_269	chr11	+	3862	12	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	-26	-82	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTGACCTGGCTTCC	NA	False	NA	29	True	AATAAA	-41	NA	32592757	32696707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_201028_127	chrX	+	1452	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-24	-1	-24	1	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTTTACCTGTAGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	52726768	52740409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
Isoform_201029_27	chrX	+	1584	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-33	-124	-33	124	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTTTTCCATGATCCCC	NA	False	NA	NA	False	AATAAA	-21	NA	52726759	52740532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
Isoform_201031_7	chrX	+	3897	4	NIC	ENSMUSG00000055555.2	novel	1427	5	NA	NA	-54	1	intron_retention	FALSE	canonical	3	124	junction_3	20.138409955991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTTTACCTGTAGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	52726738	52740409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_52727016_52729333_52729516_52735693_52738355_52739632
Isoform_201032_13	chrX	+	1032	8	FSM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	-11	1	-11	-1	multi-exon	FALSE	canonical	3	19	junction_1	16.2819544532076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	55181920	55198857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
Isoform_201033_3	chrX	+	756	8	NNC	ENSMUSG00000031125.3	novel	1022	8	NA	NA	10	-208	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.1048273216323	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTTTGAAAGGCTCT	NA	False	NA	NA	False	AATAAA	-30	NA	55181941	55198650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_55181986_55183378_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
Isoform_201034_65	chrX	+	3734	5	FSM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	2	2	2	-2	multi-exon	FALSE	canonical	3	23	junction_1	8.6421930087218	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTTTCTGATTCTTT	NA	False	NA	4	True	AATAAA	-14	NA	55391761	55411032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_55391800_55393642_55394089_55398822_55399028_55407826_55407941_55408101
Isoform_201035_9	chrX	+	3288	4	NIC	ENSMUSG00000073176.5	novel	3738	5	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	18.8030730348939	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTTTCTGATTCTTT	NA	False	NA	4	True	AATAAA	-14	NA	55391761	55411032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55391800_55398822_55399028_55407826_55407941_55408101
Isoform_201037_113	chrX	+	2405	2	FSM	ENSMUSG00000054850.5	ENSMUST00000068106.5	2393	2	-13	1	-13	-1	multi-exon	FALSE	canonical	3	59	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATCCTGGCTGCCTCCT	NA	False	NA	13	True	AAGAAA	-14	NA	55419932	55423158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_55420569_55421389
Isoform_20104_21	chr11	+	4091	12	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	-192	-79	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGACCTGGCTTCCTGG	NA	False	NA	32	True	AATAAA	-44	NA	32592531	32696710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_201042_14	chrX	+	3875	18	NIC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	2	-1	intron_retention	FALSE	canonical	3	44	junction_10	16.0656094259874	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55500241	55553202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
Isoform_201043_4	chrX	+	3695	19	NIC	ENSMUSG00000035967.16	novel	3608	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	22.3606797749979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTAGGTGTATGTCT	NA	False	NA	16	True	AATAAA	-27	NA	55500205	55553200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552360_55552573
Isoform_201044_35	chrX	+	3798	17	FSM	ENSMUSG00000035967.16	ENSMUST00000039374.9	3766	17	-31	-1	-11	0	multi-exon	FALSE	canonical	3	20	junction_10	18.8414436814168	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTAGGTGTATGTCT	NA	False	NA	16	True	AATAAA	-27	NA	55500205	55553200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
Isoform_201047_3	chrX	+	3584	18	NIC	ENSMUSG00000035967.16	novel	3608	18	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_17	24.6048353759059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTACATTTCTAGGTG	NA	False	NA	9	True	AATAAA	-20	NA	55500198	55553193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552360_55552573
Isoform_201048_14	chrX	+	4036	17	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	44	junction_9	15.57040461902	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACATTTCTAGGTGTA	NA	False	NA	11	True	AATAAA	-22	NA	55500205	55553195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
Isoform_201051_4	chrX	+	3829	18	NIC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	-11	-1	intron_retention	FALSE	canonical	2	3	junction_17	22.566165689147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55500205	55553202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552360_55552573
Isoform_201052_4	chrX	+	3927	16	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	20	junction_9	18.5539453725856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACATTTCTAGGTGTA	NA	False	NA	11	True	AATAAA	-22	NA	55500203	55553195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
Isoform_201053_4	chrX	+	7306	15	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	62	junction_6	11.9080233627653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACATTTCTAGGTGT	NA	False	NA	10	True	AATAAA	-21	NA	55500205	55553194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
Isoform_201054_62	chrX	+	4417	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	17	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	37.5097903886439	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCATTCACTGTTATT	NA	False	NA	14	True	ATTAAA	-18	NA	55655151	55709190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
Isoform_201056_7	chrX	+	4818	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	16	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	37.5097903886439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTCTTTGTACATGAG	NA	False	NA	NA	False	ATTAAA	-19	NA	55655150	55709590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
Isoform_201060_91	chrX	+	4515	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	60	401	18	0	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATTCACTGTTAT	NA	False	NA	13	True	ATTAAA	-17	NA	55655194	55709189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
Isoform_201062_15	chrX	+	4911	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	61	4	19	-4	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTCTCTCTTTGTACA	NA	False	NA	NA	False	ATTAAA	-15	NA	55655195	55709586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
Isoform_201063_32	chrX	+	2574	8	NIC	ENSMUSG00000023092.17	novel	2770	8	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	57.513796037941	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCACGCCTCCTGTCTT	NA	False	NA	5	True	AATAAA	-11	NA	55777121	55838699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55836598_55836799_55837203
Isoform_201065_344	chrX	+	2355	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	-6	7	-6	1	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCACGCCTCCTGTCTT	NA	False	NA	5	True	AATAAA	-11	NA	55777140	55838699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
Isoform_201066_24	chrX	+	2448	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	-99	7	-99	1	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCACGCCTCCTGTCTT	NA	False	NA	5	True	AATAAA	-11	NA	55777047	55838699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
Isoform_201067_7	chrX	+	2585	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	-238	9	-238	-1	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGCACGCCTCCTGTC	NA	False	NA	3	True	AATAAA	-9	NA	55776908	55838697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
Isoform_201069_26	chrX	+	2159	6	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	48.3553513067582	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCACGCCTCCTGTCTT	NA	False	NA	5	True	AATAAA	-11	NA	55777149	55838699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55837203
Isoform_201070_18	chrX	+	2196	6	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	-34	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	48.3553513067582	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCACGCCTCCTGTCTT	NA	False	NA	5	True	AATAAA	-11	NA	55777112	55838699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55837203
Isoform_201076_33	chrX	+	1156	6	FSM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	-28	0	-28	0	multi-exon	FALSE	canonical	3	35	junction_5	193.065170344109	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCACTGGCTCACTTAT	NA	False	NA	25	True	NA	NA	NA	56098914	56102566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56102250
Isoform_201079_711	chrX	+	2844	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	-37	3	-5	-3	multi-exon	FALSE	canonical	3	407	junction_1	40.9980427114861	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGGACTTGAGTTAAC	NA	False	NA	13	True	AATAAA	-28	NA	56098937	56112540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
Isoform_201096_136	chrX	+	2721	9	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	274	3	-9	-3	3prime_fragment	FALSE	canonical	3	455	junction_5	31.3996417177012	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGGACTTGAGTTAAC	NA	False	NA	13	True	AATAAA	-28	NA	56099248	56112540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
Isoform_201098_71	chrX	+	2742	9	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	251	5	-32	-5	3prime_fragment	FALSE	canonical	3	455	junction_5	31.3996417177012	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTGGACTTGAGTTA	NA	False	NA	11	True	AATAAA	-26	NA	56099225	56112538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
Isoform_2011_4	chr10	-	893	3	NNC	ENSMUSG00000019813.17	novel	711	3	NA	NA	-5611	-16	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	97	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	5901	False	NA	NA	False	NA	NA	NA	41628245	41618713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_41619218_41621766_41621918_41628007
Isoform_20110_3	chr11	+	1968	4	NNC	ENSMUSG00000056427.11	novel	5228	36	NA	NA	-179	-56011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.86744175568088	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTTGCCTAGTTTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	35011871	35070023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_35012539_35062399_35062472_35068609_35068682_35068866
Isoform_201107_303	chrX	+	2156	17	FSM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	2	-2	2	2	multi-exon	FALSE	canonical	1	199	junction_7	106.775300719548	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCCCTGTCTGGCCT	NA	False	NA	11	True	TATAAA	-4	NA	56454515	56534129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
Isoform_201108_8	chrX	+	2266	17	FSM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	-107	-3	-107	3	multi-exon	FALSE	canonical	1	199	junction_7	106.775300719548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTCCCTGTCTGGCCTC	NA	False	NA	12	True	TATAAA	-5	NA	56454406	56534130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
Isoform_201109_361	chrX	+	2157	17	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	151.271641013774	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCCCTGTCTGGCCT	NA	False	NA	11	True	TATAAA	-4	NA	56454515	56534129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468741_56478571_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
Isoform_201121_7	chrX	+	4499	2	ISM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	368	-74	1	74	intron_retention	FALSE	canonical	3	213	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAGAGAATTTCTGGTG	9868	False	NA	8	True	AATAAA	-18	NA	57076370	57081993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_57077598_57078721
Isoform_201122_75	chrX	+	4031	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	-10	-72	-10	72	multi-exon	FALSE	canonical	3	194	junction_2	9.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTAGAGAATTTCTGG	9490	False	NA	6	True	AATAAA	-16	NA	57075992	57081991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_57077598_57078721_57078886_57079729
Isoform_20113_10	chr11	+	2519	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	82	4775	82	-4775	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTTGTCTTTCTGCTTG	NA	False	NA	NA	False	CATAAA	-15	NA	35660392	35677337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
Isoform_201133_104	chrX	+	3653	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	368	-72	1	72	multi-exon	FALSE	canonical	3	194	junction_2	9.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTAGAGAATTTCTGG	9868	False	NA	6	True	AATAAA	-16	NA	57076370	57081991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_57077598_57078721_57078886_57079729
Isoform_20114_68	chr11	+	7265	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	109	2	109	-2	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTCCTGCTTGTTT	NA	False	NA	13	True	AATAAA	-15	NA	35660419	35682110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
Isoform_201148_11	chrX	+	1949	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088629.4	1951	3	1	1	1	-1	multi-exon	FALSE	canonical	3	14	junction_2	99.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	9868	False	NA	NA	False	NA	NA	NA	57076370	57087095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_57077598_57078721_57078886_57086537
Isoform_201150_148	chrX	+	1563	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	16	-7	16	7	multi-exon	FALSE	canonical	3	101	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTTTGTTCTTTGGAG	NA	False	NA	20	True	AATAAA	-25	NA	57956836	57965671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_57956922_57964193
Isoform_201151_8	chrX	+	1928	4	FSM	ENSMUSG00000045330.9	ENSMUST00000051414.2	1970	4	43	-1	43	1	multi-exon	FALSE	canonical	1	3	junction_2	2.62466929133727	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATCTTTTCTGTTTGGA	NA	False	NA	NA	False	AATAAA	-22	NA	61330790	61335685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_61330842_61332956_61333046_61333767_61333841_61333970
Isoform_201152_7	chrX	+	1615	4	FSM	ENSMUSG00000031179.15	ENSMUST00000033522.15	1649	4	1	33	1	-33	multi-exon	FALSE	canonical	2	4	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAACAGAATAAAATTAAA	NA	False	NA	NA	False	AATGAA	-5	NA	63217154	63222351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_63217298_63219533_63219620_63220397_63220469_63221036
Isoform_201153_6	chrX	+	2367	8	FSM	ENSMUSG00000079577.2	ENSMUST00000114672.2	782	8	-869	-716	-869	716	multi-exon	FALSE	canonical	3	52	junction_3	6.1842459491181	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGAAATTATCAAATTA	NA	False	NA	NA	False	ATTAAA	-18	NA	66738434	66750672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_66739413_66739880_66739951_66740099_66740135_66741912_66742031_66742916_66743017_66743790_66743890_66749598_66749704_66749810
Isoform_20116_5	chr11	+	7346	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	28	2	28	-2	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTCCTGCTTGTTT	NA	False	NA	13	True	AATAAA	-15	NA	35660338	35682110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
Isoform_201164_471	chrX	+	4349	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	43	17	2	-17	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTATGAAAAAGCAAAATAC	NA	False	NA	3	True	ATTAAA	-9	NA	67722189	67761552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
Isoform_201168_41	chrX	+	4404	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	-6	11	-6	-11	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722140	67761558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
Isoform_20117_3	chr11	+	6874	7	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	108	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.5187374031961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTCCTGCTTGTTT	NA	False	NA	13	True	AATAAA	-15	NA	35660418	35682110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_35660775_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234_35678873_35678911
Isoform_201172_206	chrX	+	4280	17	FSM	ENSMUSG00002075986.1_ENSMUSG00000000838.18	ENSMUST00000114653.2	4058	17	-233	11	2	-11	multi-exon	FALSE	canonical	3	204	junction_14	173.862182759075	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722189	67761558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
Isoform_201173_19	chrX	+	4325	17	FSM	ENSMUSG00002075986.1_ENSMUSG00000000838.18	ENSMUST00000114653.2	4058	17	-267	0	9	0	multi-exon	FALSE	canonical	3	204	junction_14	173.862182759075	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722155	67761569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
Isoform_201176_183	chrX	+	4217	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	63	-10	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_14	180.447880286802	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATACTAGTCTG	NA	False	NA	10	True	ATTAAA	-16	NA	67722292	67761559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
Isoform_201178_32	chrX	+	3835	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	-495	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_14	180.447880286802	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATGTTGATGCAATCC	NA	False	NA	17	True	AATAAA	-20	NA	67722189	67761074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
Isoform_201187_150	chrX	+	4190	16	FSM	ENSMUSG00000000838.18	ENSMUST00000114657.9	4076	16	-124	10	63	-10	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATACTAGTCTG	NA	False	NA	10	True	ATTAAA	-16	NA	67722292	67761559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
Isoform_201189_94	chrX	+	4293	16	FSM	ENSMUSG00002075986.1_ENSMUSG00000000838.18	ENSMUST00000114657.9	4076	16	-227	10	2	-10	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATACTAGTCTG	NA	False	NA	10	True	ATTAAA	-16	NA	67722189	67761559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
Isoform_20119_719	chr11	+	1583	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	-8	2	-8	-2	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624485	40630871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
Isoform_201193_34	chrX	+	4119	16	NIC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	59	-10	combination_of_known_junctions	FALSE	canonical	3	204	junction_13	199.338461472497	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATACTAGTCTG	NA	False	NA	10	True	ATTAAA	-16	NA	67722288	67761559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
Isoform_201194_33	chrX	+	4228	16	Fusion	ENSMUSG00002075986.1_ENSMUSG00000000838.18	novel	4058	17	NA	NA	2	0	multi-exon	FALSE	canonical	3	204	junction_13	199.338461472497	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722189	67761569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
Isoform_2012_10	chr10	-	1118	3	FSM	ENSMUSG00000071324.12	ENSMUST00000162405.8	1135	3	8	9	8	-9	multi-exon	FALSE	canonical	3	5	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAACGAGAATCCTG	NA	False	NA	NA	False	AATAAA	-24	NA	41894368	41875812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_41876495_41887763_41888020_41894188
Isoform_201200_69	chrX	+	4256	16	Fusion	ENSMUSG00002075986.1_ENSMUSG00000000838.18	novel	4076	16	NA	NA	2	-11	multi-exon	FALSE	canonical	3	169	junction_13	205.444883119536	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722189	67761558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
Isoform_201215_48	chrX	+	914	6	FSM	ENSMUSG00000062170.13	ENSMUST00000071848.7	842	6	-80	8	15	-8	multi-exon	FALSE	canonical	3	35	junction_2	319.056484027515	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGAATCTGGATTCTTT	NA	False	NA	19	True	ATTAAA	-19	NA	67805459	67848165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67805838_67807537_67807616_67812561_67812700_67815650_67815748_67847210_67847300_67848031
Isoform_201217_384	chrX	+	776	5	FSM	ENSMUSG00000062170.13	ENSMUST00000069731.12	799	5	15	8	15	-8	multi-exon	FALSE	canonical	3	455	junction_2	146.787899705664	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGAATCTGGATTCTTT	NA	False	NA	19	True	ATTAAA	-19	NA	67805459	67848165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67805838_67807537_67807616_67815650_67815748_67847210_67847300_67848031
Isoform_201223_246	chrX	+	698	4	FSM	ENSMUSG00000062170.13	ENSMUST00000114647.8	679	4	-27	8	15	-8	multi-exon	FALSE	canonical	3	331	junction_1	201.191451110627	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGAATCTGGATTCTTT	NA	False	NA	19	True	ATTAAA	-19	NA	67805459	67848165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67805838_67815650_67815748_67847210_67847300_67848031
Isoform_201226_322	chrX	+	1093	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	1	0	1	0	multi-exon	FALSE	canonical	3	343	junction_1	1.5	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	False	NA	14	True	AATAAA	-21	NA	69429483	69433023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_69429758_69431499_69431773_69432477
Isoform_201229_23	chrX	+	2621	14	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	34	6493	1	-1509	5prime_fragment	FALSE	canonical	3	300	junction_1	26.1022114731105	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTTGGAACCTTGTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	70258645	70352408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305
Isoform_201231_608	chrX	+	3354	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	26	-1	1	1	multi-exon	FALSE	canonical	3	290	junction_14	28.3207755284104	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGGGCTATGACTGTG	NA	False	NA	17	True	AATAAA	-25	NA	70258637	70358902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
Isoform_201234_16	chrX	+	3170	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_13	93.3887339099411	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTATTTCCAGGGCTAT	NA	False	NA	10	True	AATAAA	-42	NA	70258637	70358895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70357251
Isoform_201235_15	chrX	+	3242	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	91.7350184469783	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258637	70358901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
Isoform_201237_10	chrX	+	3231	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-2	-2	combination_of_known_splicesites	TRUE	canonical	3	19	junction_3	89.9133047266304	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCCAGGGCTATGACT	NA	False	NA	14	True	AATAAA	-22	NA	70258662	70358899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
Isoform_201238_34	chrX	+	3375	15	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	80.3753947525774	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258680	70358901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_70258754_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
Isoform_201246_139	chrX	+	4642	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	-7	-1	-7	1	multi-exon	FALSE	canonical	3	55	junction_13	10.0440356959354	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTGTCTCTGTGTTTT	NA	False	NA	12	True	ACTAAA	-25	NA	70408358	70462803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
Isoform_201248_26	chrX	+	4488	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	19.0688568554895	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTCTGTTGTCTCTGTG	NA	False	NA	8	True	ACTAAA	-21	NA	70408358	70462799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
Isoform_201249_506	chrX	+	1541	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	2	28	2	-28	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTTCTGTATTACAAC	NA	False	NA	NA	False	AATAAA	-17	NA	70599525	70604254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
Isoform_201253_176	chrX	+	1651	5	FSM	ENSMUSG00000015217.12	ENSMUST00000114582.9	1743	5	64	28	2	-28	multi-exon	FALSE	canonical	3	153	junction_1	303.596360320739	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTTCTGTATTACAAC	NA	False	NA	NA	False	AATAAA	-17	NA	70599597	70604254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
Isoform_201257_12	chrX	+	1699	5	FSM	ENSMUSG00000015217.12	ENSMUST00000088874.10	1728	5	1	28	1	-28	multi-exon	FALSE	canonical	3	38	junction_1	352.060630431748	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTTCTGTATTACAAC	NA	False	NA	NA	False	AATAAA	-17	NA	70599596	70604254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_70599844_70601658_70601814_70602038_70602179_70602703_70602879_70603272
Isoform_201261_54	chrX	+	2438	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	22	1735	-10	-1735	multi-exon	FALSE	canonical	3	286	junction_1	56.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCACACTGGTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	70860385	70866577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_70860547_70863673_70863784_70864410
Isoform_201265_117	chrX	+	509	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	35	3651	3	71	multi-exon	FALSE	canonical	3	286	junction_1	56.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGTCTTAAAGAGTCA	NA	False	NA	24	True	AATAAA	-36	NA	70860398	70864661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_70860547_70863673_70863784_70864410
Isoform_201268_5	chrX	+	572	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	-28	3651	-28	71	multi-exon	FALSE	canonical	3	286	junction_1	56.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGTCTTAAAGAGTCA	NA	False	NA	24	True	AATAAA	-36	NA	70860335	70864661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_70860547_70863673_70863784_70864410
Isoform_201269_5	chrX	+	4213	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	-19	1	-19	-1	multi-exon	FALSE	canonical	3	286	junction_1	56.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCTGTGTCCTCATTC	NA	False	NA	15	True	ATTAAA	-19	NA	70860344	70868311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_70860547_70863673_70863784_70864410
Isoform_201271_28	chrX	+	2126	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	51	-9	51	9	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGGCTGTTCTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	71962213	72002129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
Isoform_201272_492	chrX	+	1747	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	39	382	39	-382	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAGACTCTGGTGTGGT	NA	False	NA	14	True	CATAAA	-14	NA	71962201	72001738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
Isoform_201279_90	chrX	+	3510	19	FSM	ENSMUSG00000031351.16	ENSMUST00000164800.8	3557	19	23	24	2	-24	multi-exon	FALSE	canonical	3	40	junction_12	13.3427050397503	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATAACTTCTTTTTTA	NA	False	NA	21	True	AATAAA	-21	NA	72030967	72075125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
Isoform_201282_22	chrX	+	3504	19	FSM	ENSMUSG00000031351.16	ENSMUST00000114546.9	3533	19	2	27	2	-27	multi-exon	FALSE	canonical	3	15	junction_9	16.5279411756629	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATTATAACTTCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	72030967	72075122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045013_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
Isoform_201283_4	chrX	+	3444	18	NNC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	0	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.4309868468961	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTATAACTTCTTTTTT	NA	False	NA	20	True	AATAAA	-20	NA	72030965	72075124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72031126_72040640_72040719_72040887_72041012_72042141_72042180_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
Isoform_201285_33	chrX	+	2847	5	FSM	ENSMUSG00000067771.10	ENSMUST00000088459.9	2864	5	21	-4	21	4	multi-exon	FALSE	canonical	3	20	junction_1	16.161296358894	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAGATGTCTAAGACAGC	NA	False	NA	NA	False	AATAAA	-22	NA	72160673	72172872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72160742_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_201287_14	chrX	+	2951	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	22	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	22.4499443206436	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGATGTCTAAGACAGCT	NA	False	NA	NA	False	AATAAA	-23	NA	72160674	72172873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72160742_72166217_72166322_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_201289_20	chrX	+	1151	9	FSM	ENSMUSG00000072479.11	ENSMUST00000114518.9	1652	9	30	471	30	308	multi-exon	TRUE	canonical	3	121	junction_8	146.338167868127	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	72192431	72202007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
Isoform_201290_9	chrX	+	1038	8	NIC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	42	306	combination_of_known_splicesites	FALSE	canonical	3	121	junction_7	152.49623615295	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72192443	72202005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
Isoform_201293_478	chrX	+	1584	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-10	-10	1	0	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235817	72246536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_201294_20	chrX	+	1974	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-10	-400	1	390	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGAATGTCTCCTACT	NA	False	NA	NA	False	AATAAA	-17	NA	72235817	72246926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_201296_36	chrX	+	1613	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-41	-8	-26	-1	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72235786	72246534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_201297_25	chrX	+	1486	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	505.773079713883	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235816	72246536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72245455_72245552_72245645
Isoform_201298_203	chrX	+	2398	8	NIC	ENSMUSG00000073125.11	novel	2384	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235817	72246535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_201301_9	chrX	+	2300	7	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	39	junction_5	541.181936957331	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235817	72246536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72245455_72245552_72245645
Isoform_201304_18	chrX	+	3774	7	FSM	ENSMUSG00000073125.11	ENSMUST00000137641.8	3780	7	5	1	1	0	multi-exon	FALSE	canonical	3	979	junction_3	266.969203384127	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235817	72246535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_201311_28	chrX	+	1192	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	78.4071903590481	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257938	72266059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_72258064_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
Isoform_201312_4	chrX	+	1164	9	FSM	ENSMUSG00000067768.13	ENSMUST00000081827.4	1077	9	-84	-3	-1	0	multi-exon	FALSE	canonical	3	19	junction_2	104.421546507414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257953	72266059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72258064_72258379_72258463_72258846_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
Isoform_201313_6	chrX	+	1174	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	104.319221622863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	16	True	AATAAA	-16	NA	72257942	72266057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_72258088_72258379_72258427_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
Isoform_201314_49	chrX	+	1212	9	FSM	ENSMUSG00000067768.13	ENSMUST00000069077.10	1200	9	-12	0	4	0	multi-exon	FALSE	canonical	3	74	junction_1	80.9281123899477	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257942	72266059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72258088_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
Isoform_201316_6	chrX	+	6369	6	FSM	ENSMUSG00000031365.14	ENSMUST00000033731.4	6376	6	6	1	6	-1	multi-exon	FALSE	canonical	3	12	junction_2	13.9226434271657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTCTTTCTTGACTCAT	NA	False	NA	11	True	NA	NA	NA	72386232	72402685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72386358_72388442_72388519_72394874_72394967_72395414_72395530_72396441_72396544_72396826
Isoform_201319_19	chrX	+	6310	5	FSM	ENSMUSG00000031365.14	ENSMUST00000114499.8	6284	5	-26	0	-26	0	multi-exon	FALSE	canonical	3	19	junction_2	9.63068014212911	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386200	72402686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826
Isoform_201320_12	chrX	+	5852	6	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	11.6206712370672	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGTCTTTCTTGACTCA	NA	False	NA	10	True	NA	NA	NA	72386200	72402684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826_72396928_72397383
Isoform_201323_4044	chrX	+	2711	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	10	1	10	-1	multi-exon	FALSE	canonical	3	583	junction_1	9.62635271879577	4044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGAGGTTGTTGCTTCT	NA	False	NA	27	True	AATAAA	-21	NA	72683034	72687119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
Isoform_201324_1488	chrX	+	2734	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	-13	1	-13	-1	multi-exon	TRUE	canonical	3	583	junction_1	9.62635271879577	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGAGGTTGTTGCTTCT	NA	False	NA	27	True	AATAAA	-21	NA	72683011	72687119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
Isoform_20134_23	chr11	+	1509	4	FSM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	-287	-495	-8	-1	multi-exon	FALSE	canonical	3	70	junction_2	523.696052644619	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTACTTTTTCTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	40624485	40630872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_40624982_40626844_40626894_40627394_40627472_40629985
Isoform_201344_846	chrX	+	2722	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-618	1210	17	1	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCCACCAAAAATAGATG	NA	False	NA	10	True	AATAAA	-16	NA	72716772	72724898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_201345_679	chrX	+	3927	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-617	4	18	-4	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716773	72726104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_201346_94	chrX	+	3974	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-663	3	-28	-3	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGCTCCTGTTTCTGC	NA	False	NA	27	True	AATAAA	-17	NA	72716727	72726105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_201347_106	chrX	+	2767	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-663	1210	-28	1	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCCACCAAAAATAGATG	NA	False	NA	10	True	AATAAA	-16	NA	72716727	72724898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_20136_23	chr11	+	1232	4	FSM	ENSMUSG00000020328.11	ENSMUST00000141839.2	577	4	-93	-562	-93	-1	multi-exon	FALSE	canonical	3	90	junction_1	492.487788906712	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTACTTTTTCTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	40624938	40630872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_40625083_40626844_40626894_40627319_40627472_40629985
Isoform_201361_20	chrX	+	2587	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	17	1	intron_retention	FALSE	canonical	3	40	junction_4	118.785590577837	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCCACCAAAAATAGATG	NA	False	NA	10	True	AATAAA	-16	NA	72716772	72724898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_201367_20	chrX	+	4350	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	16	-4	intron_retention	FALSE	canonical	3	365	junction_8	42.9568301460705	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716771	72726104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_72717657_72719243_72719376_72720255_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_201382_54	chrX	+	3659	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	-12	1	-12	-1	multi-exon	TRUE	canonical	3	38	junction_7	8.3901765016235	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCCTCCTGAACTTGG	NA	False	NA	17	True	AGTAAA	-18	NA	72760190	72782139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
Isoform_201383_72	chrX	+	3513	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	134	1	-9	-1	multi-exon	FALSE	canonical	3	38	junction_7	8.3901765016235	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCCTCCTGAACTTGG	NA	False	NA	17	True	AGTAAA	-18	NA	72760336	72782139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
Isoform_201388_7	chrX	+	2358	15	ISM	ENSMUSG00000031385.15	ENSMUST00000002079.7	6030	35	10378	11	1946	-11	3prime_fragment	FALSE	canonical	0	0	junction_1	1.4638501094228	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATCTCAATCTGAAG	NA	False	NA	NA	False	AATAAA	-20	NA	72811082	72816109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_72811279_72811386_72811488_72811563_72811788_72811945_72812125_72812295_72812363_72812739_72813068_72813207_72813312_72813395_72813493_72813861_72814041_72814184_72814346_72814700_72814849_72815016_72815082_72815148_72815225_72815351_72815427_72815751
Isoform_20139_18	chr11	+	3447	3	NIC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	1122	junction_1	12.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTACTTTTTCTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	40624485	40630872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_40626894_40627319_40627472_40629985
Isoform_201391_47	chrX	+	1046	5	ISM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-16	-1	-16	-1	intron_retention	FALSE	canonical	3	1181	junction_1	174.03789098929	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5416	False	NA	47	True	AATAAA	-29	NA	72830617	72834431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964
Isoform_201393_462	chrX	+	806	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-5	-1	-5	-1	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5427	False	NA	47	True	AATAAA	-29	NA	72830628	72834431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_201395_41	chrX	+	856	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-55	-1	-55	-1	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5377	False	NA	47	True	AATAAA	-29	NA	72830578	72834431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_201403_24	chrX	+	1134	6	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	147	junction_2	607.911835713042	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5427	False	NA	47	True	AATAAA	-29	NA	72830628	72834431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72830913_72832440_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964
Isoform_201404_57	chrX	+	885	7	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_2	575.300621897418	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5447	False	NA	47	True	AATAAA	-29	NA	72830648	72834431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72830913_72832440_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_201405_21	chrX	+	880	7	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	599.846276603894	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5427	False	NA	47	True	AATAAA	-29	NA	72830628	72834431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72830913_72832440_72832560_72832685_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_201409_19	chrX	+	1031	5	ISM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	-39	2	-5	0	intron_retention	FALSE	canonical	3	426	junction_1	493.487081897794	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5427	False	NA	46	True	AATAAA	-28	NA	72830628	72834430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964
Isoform_201410_189	chrX	+	803	6	FSM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	-39	1	-5	-1	multi-exon	FALSE	canonical	3	426	junction_1	441.755135793575	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5427	False	NA	47	True	AATAAA	-29	NA	72830628	72834431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_201414_17	chrX	+	894	7	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_2	599.594863220158	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTCAAGACACGGGGCT	5427	False	NA	39	True	AATAAA	-21	NA	72830628	72834423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72830913_72832443_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_201421_15	chrX	+	2517	13	FSM	ENSMUSG00000031397.12	ENSMUST00000010127.12	2473	13	-55	11	-55	-11	multi-exon	FALSE	canonical	2	11	junction_9	3.8151743807532	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCATCTACTTTATG	6421	False	NA	-5	True	AATAAA	-7	NA	73220809	73252095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73221030_73225389_73225505_73234827_73234926_73237124_73237317_73237399_73237528_73240589_73240784_73241245_73241411_73244203_73244361_73246136_73246268_73248479_73248564_73249479_73249577_73249950_73250071_73251279
Isoform_201423_589	chrX	+	1343	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	112	140	-11	-140	multi-exon	FALSE	canonical	3	248	junction_2	18.1592951405059	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTGATTCTTCCTACT	NA	False	NA	20	True	AATAAA	-15	NA	73298404	73301353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
Isoform_201426_12	chrX	+	1344	6	FSM	ENSMUSG00000001964.15	ENSMUST00000088313.5	1338	6	-5	-1	-5	1	multi-exon	FALSE	canonical	3	12	junction_5	106.854293315711	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGGA	NA	False	NA	NA	False	AATAAA	-14	NA	73298430	73305155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73304387
Isoform_20143_25	chr11	+	3872	2	FSM	ENSMUSG00000020328.11	ENSMUST00000144601.2	445	2	-2647	-780	-8	-2	multi-exon	FALSE	canonical	3	1147	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624485	40630871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_40627472_40629985
Isoform_201431_154	chrX	+	786	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	13	0	13	0	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314430	73316741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_201432_39	chrX	+	862	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	-63	0	-63	0	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314354	73316741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_201433_33	chrX	+	757	7	FSM	ENSMUSG00000008682.14	ENSMUST00000151702.8	648	7	1	-110	0	0	multi-exon	FALSE	canonical	3	57	junction_1	3469.80780767786	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314463	73316741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73314485_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_201434_212	chrX	+	857	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	-2	0	0	0	multi-exon	FALSE	canonical	3	7516	junction_1	832.521615335001	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314463	73316741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_201436_11	chrX	+	1487	5	NIC	ENSMUSG00000008682.14	novel	855	6	NA	NA	0	-5	intron_retention	FALSE	canonical	3	9221	junction_2	201.900191926605	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTTTTTGTTTCTGA	NA	False	NA	7	True	AATAAA	-17	NA	73314463	73316736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_201439_10	chrX	+	2005	2	FSM	ENSMUSG00000008682.14	ENSMUST00000146584.2	699	2	-981	-325	-1	-4	multi-exon	FALSE	canonical	3	9221	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTTTTTGTTTCTGAT	NA	False	NA	8	True	AATAAA	-18	NA	73314461	73316737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73315514_73315784
Isoform_201446_7	chrX	+	2769	5	FSM	ENSMUSG00000009995.18	ENSMUST00000156072.8	879	5	-20	-1870	-10	1	multi-exon	FALSE	canonical	3	243	junction_3	8.25757228245687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326345	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624
Isoform_201447_16	chrX	+	2681	6	ISM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	0	-1	0	1	intron_retention	FALSE	canonical	3	226	junction_5	12.5123938556936	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326355	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783
Isoform_201448_10	chrX	+	1796	10	FSM	ENSMUSG00000009995.18	ENSMUST00000114180.11	1786	10	-11	1	1	-1	multi-exon	FALSE	canonical	3	23	junction_6	91.4165611600053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTCTGTCTTCTGTGT	NA	False	NA	6	True	AATAAA	-19	NA	73326356	73333753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332053_73332120_73332267_73332321_73332710_73332789_73332904
Isoform_201449_16	chrX	+	1758	9	FSM	ENSMUSG00000009995.18	ENSMUST00000114182.11	750	9	-342	-666	-10	0	multi-exon	FALSE	canonical	3	23	junction_6	86.9927259890159	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326345	73333757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332053_73332120_73332710_73332789_73332904
Isoform_201451_84	chrX	+	1806	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	43	2	-10	1	multi-exon	FALSE	canonical	3	70	junction_7	76.3282385490455	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326345	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
Isoform_201454_71	chrX	+	1753	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	-10	-1	-10	1	multi-exon	FALSE	canonical	3	81	junction_7	66.075241202738	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326345	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
Isoform_201455_21	chrX	+	2265	9	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-16	1	intron_retention	FALSE	canonical	3	76	junction_7	67.3163009604657	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326339	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332626_73332710_73332789_73332904
Isoform_201456_5	chrX	+	2322	8	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	118	junction_6	47.1151433691321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326367	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332789_73332904
Isoform_201457_10	chrX	+	2036	9	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	70	junction_6	75.5379664473435	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326345	73333754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332321_73332710_73332789_73332904
Isoform_201459_14	chrX	+	2404	8	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	70	junction_6	63.5295206970744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326368	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332789_73332904
Isoform_201460_75	chrX	+	2490	8	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-10	1	intron_retention	FALSE	canonical	3	76	junction_6	61.4664335143954	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326345	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
Isoform_201461_85	chrX	+	2565	7	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	226	junction_5	12.5266382827424	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326355	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332789_73332904
Isoform_201462_8	chrX	+	2631	6	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	243	junction_3	8.17312669668102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326367	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73332789_73332904
Isoform_201466_11	chrX	+	2929	5	NIC	ENSMUSG00000009995.18	novel	826	8	NA	NA	-10	1	intron_retention	FALSE	canonical	3	226	junction_4	13.8744369255116	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326345	73333755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73326723_73326877_73327007_73327253_73327624_73331624_73331706_73331783
Isoform_201467_5	chrX	+	2713	7	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	76	junction_5	65.8525288470804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTCTGTCTTCTGTGT	NA	False	NA	6	True	AATAAA	-19	NA	73326358	73333753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73326723_73326877_73327007_73327253_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
Isoform_201470_33	chrX	+	2087	10	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	212.313069560432	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTTCGTGTCACTCA	NA	False	NA	16	True	AATAAA	-21	NA	73340768	73348297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344965_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
Isoform_201472_37	chrX	+	2318	9	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	-16	-1	4	1	intron_retention	FALSE	canonical	3	647	junction_4	28.1954672775608	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340752	73348296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963
Isoform_201474_2383	chrX	+	2108	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	50	31	4	1	multi-exon	FALSE	canonical	3	647	junction_4	26.5934179176579	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340752	73348296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
Isoform_201475_235	chrX	+	2140	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	18	31	18	1	multi-exon	TRUE	canonical	3	647	junction_4	26.5934179176579	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340720	73348296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
Isoform_201480_64	chrX	+	2658	9	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	665	junction_4	23.6748812035034	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340754	73348296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
Isoform_201492_1343	chrX	+	2411	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	254	1	-4	1	multi-exon	FALSE	canonical	3	553	junction_5	84.5884152824723	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGCTCTTTAGGTTCT	6202	False	NA	14	True	AATAAA	-15	NA	73348857	73355467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
Isoform_201493_37	chrX	+	2649	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	15	2	1	0	multi-exon	FALSE	canonical	3	553	junction_5	84.5884152824723	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	5963	False	NA	13	True	AATAAA	-14	NA	73348618	73355466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
Isoform_201499_350	chrX	+	2670	10	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	-4	1	intron_retention	FALSE	canonical	3	728	junction_6	47.3648825477846	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGCTCTTTAGGTTCT	6202	False	NA	14	True	AATAAA	-15	NA	73348857	73355467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
Isoform_20150_71	chr11	+	2769	17	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	2	-948	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTGGATTTTCGTACAC	NA	False	NA	12	True	AATAAA	-23	NA	43324572	43337860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
Isoform_201504_64	chrX	+	3456	9	FSM	ENSMUSG00000015291.11	ENSMUST00000146013.8	3696	9	240	0	-4	0	multi-exon	FALSE	canonical	3	736	junction_5	44.1572120383522	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6202	False	NA	13	True	AATAAA	-14	NA	73348857	73355466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73353741_73353995_73354141_73354243_73354299_73354392
Isoform_201519_409	chrX	+	1377	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	-4	10	-4	5	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTGCATTATAAGAAC	195	False	NA	NA	False	AATAAA	-23	NA	73356634	73363745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
Isoform_201526_7	chrX	+	6747	33	FSM	ENSMUSG00000031398.14	ENSMUST00000004326.4	6943	33	4	192	4	-186	multi-exon	TRUE	canonical	3	8	junction_6	7.59085592999894	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCATGTCTTTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	73372675	73388103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73372822_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
Isoform_201530_90	chrX	+	4531	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	40	-1239	7	5	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTCTGTCCTCCCTTGT	NA	False	NA	6	True	AATAAA	-20	NA	73473316	73495131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
Isoform_201537_12	chrX	+	4544	10	FSM	ENSMUSG00000004221.17	ENSMUST00000064407.10	4530	10	-7	-7	-7	7	multi-exon	FALSE	canonical	3	18	junction_3	31.82591536608	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCCTCCCTTGTTG	NA	False	NA	8	True	AATAAA	-22	NA	73473302	73495133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
Isoform_20154_10	chr11	+	2792	17	NNC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	16	-949	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	73.1481533857827	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTGGATTTTCGTACA	NA	False	NA	11	True	AATAAA	-22	NA	43324601	43337859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_43324647_43327180_43327313_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
Isoform_201543_102	chrX	+	2669	16	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	815.250756243474	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139676	74153383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
Isoform_201548_78	chrX	+	2568	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	947.11987690286	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139711	74153382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
Isoform_201563_2102	chrX	+	2586	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	217	1	-15	-1	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	2102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139676	74153382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
Isoform_201570_225	chrX	+	2752	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	52	0	52	0	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139511	74153383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
Isoform_201574_61	chrX	+	2487	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_5	713.258221081838	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139711	74153383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
Isoform_201580_50	chrX	+	3149	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	151	junction_1	697.349135173	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139700	74153382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
Isoform_20159_176	chr11	+	2672	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	4	949	4	-949	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTGGATTTTCGTACA	NA	False	NA	11	True	AATAAA	-22	NA	43324589	43337859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
Isoform_201606_552	chrX	+	1814	6	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	8302	1	-1793	-1	3prime_fragment	FALSE	canonical	3	2464	junction_5	150.861525910353	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74147761	74153382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
Isoform_201622_133	chrX	+	827	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	25	1710	2	421	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGGTATCTTGGT	562	False	NA	NA	False	AATACA	-18	NA	74426029	74438355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
Isoform_201623_15	chrX	+	2543	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	18	1	-5	-1	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTCAGACTCCACTTG	555	False	NA	NA	False	AATAAA	-20	NA	74426022	74440064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
Isoform_201628_1678	chrX	+	1559	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	30	6	12	-6	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	1678	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTTGCCTGACAATTTT	NA	False	NA	8	True	ATTAAA	-14	NA	74557934	74578542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
Isoform_20163_13	chr11	+	3640	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-13	-2	2	2	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTGTTTGAAGTAC	NA	False	NA	NA	False	AATAAA	-22	NA	43324572	43338810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
Isoform_201644_62	chrX	+	5293	17	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	145.192921228964	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	76554625	76706589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
Isoform_201665_459	chrX	+	5227	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	7	0	7	0	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	76554625	76706589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
Isoform_201674_153	chrX	+	5396	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-162	0	-162	0	multi-exon	TRUE	canonical	3	377	junction_1	40.4669412401448	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	76554456	76706589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
Isoform_20170_6	chr11	+	2719	6	FSM	ENSMUSG00000044707.8	ENSMUST00000050574.7	2672	6	-41	-6	-41	6	multi-exon	FALSE	canonical	3	6	junction_5	2.71293199325011	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTCTGTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43419569	43477830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_43419795_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
Isoform_20171_5	chr11	+	4083	4	NNC	ENSMUSG00000044950.8	novel	2739	2	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	2.05480466765633	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTGTGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	43572833	43598019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_43573444_43574307_43575053_43577183_43577253_43595360
Isoform_201713_161	chrX	+	4065	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-63	5	-45	-5	multi-exon	TRUE	canonical	3	148	junction_2	10.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGCTCTTACTTTGTG	NA	False	NA	13	True	ATTAAA	-19	NA	80114258	80141473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_80114767_80127896_80128038_80138057
Isoform_201716_37	chrX	+	4156	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-49	-100	-31	100	multi-exon	FALSE	canonical	3	148	junction_2	10.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCATAGTGCAAAATGTG	NA	False	NA	118	True	ATTAAA	-13	NA	80114272	80141578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_80114767_80127896_80128038_80138057
Isoform_201717_8	chrX	+	2165	7	FSM	ENSMUSG00000045103.20	ENSMUST00000132333.8	2133	7	-29	-3	-5	3	multi-exon	FALSE	canonical	3	317	junction_3	27.9011150713053	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAAAGTACTG	NA	False	NA	NA	False	NA	NA	NA	84091895	84184345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933
Isoform_201718_9	chrX	+	4553	18	FSM	ENSMUSG00000045103.20	ENSMUST00000113991.8	4438	18	-113	-2	5	2	multi-exon	FALSE	canonical	2	3	junction_16	104.727393692478	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACCTATTGGTTG	NA	False	NA	12	True	AATAAA	-18	NA	84091905	84248647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84241109_84241142_84246076
Isoform_201719_482	chrX	+	4499	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATACCTATTGGTTGG	NA	False	NA	13	True	AATAAA	-19	NA	84091928	84248648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
Isoform_201721_87	chrX	+	4545	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-19	2	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACCTATTGGTTG	NA	False	NA	12	True	AATAAA	-18	NA	84091881	84248647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
Isoform_201733_43	chrX	+	6375	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-57	-149	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	16.9297750708808	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTGTGTATGTTGTG	NA	False	NA	30	True	ATTAAA	-42	NA	84617570	84677926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84617772_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_201734_4	chrX	+	6632	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-171	-6	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	16.9297750708808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTACATTCTGCATCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	84617456	84678069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84617772_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_201736_4	chrX	+	6495	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-185	-157	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	16.9297750708808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTAGATTTCTGTGT	NA	False	NA	22	True	ATTAAA	-34	NA	84617442	84677918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84617772_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_201737_4	chrX	+	6573	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-106	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	16.9297750708808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	84617521	84678075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84617772_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_201738_19	chrX	+	6268	9	FSM	ENSMUSG00000035476.10	ENSMUST00000048250.10	6364	9	-55	151	-55	-151	multi-exon	FALSE	canonical	3	35	junction_2	26.186828750347	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATTTCTGTGTATGTTG	NA	False	NA	28	True	ATTAAA	-40	NA	84617572	84677924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_84617772_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_201739_18	chrX	+	6378	9	FSM	ENSMUSG00000035476.10	ENSMUST00000048250.10	6364	9	-32	18	-32	-18	multi-exon	FALSE	canonical	3	35	junction_2	26.186828750347	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAAAACAAGCTCTACA	NA	False	NA	NA	False	AATAAA	-7	NA	84617595	84678057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_84617772_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_20174_55	chr11	+	3286	2	FSM	ENSMUSG00000044950.8	ENSMUST00000061070.6	3277	2	-8	-1	-8	1	multi-exon	FALSE	canonical	3	104	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTGTGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	43572816	43598019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_43573444_43595360
Isoform_201742_10	chrX	+	6358	8	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-57	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	36.8604649665603	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCTGCATCTTTTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	84617570	84678073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84617772_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_201745_7	chrX	+	6520	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-56	-160	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	31.1840415027373	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTCTTAGATTTCTG	NA	False	NA	19	True	ATTAAA	-31	NA	84617571	84677915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84617929_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_201746_4	chrX	+	6688	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-66	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	31.1840415027373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCTGCATCTTTTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	84617561	84678073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84617929_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_201750_3	chrX	+	6392	9	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-41	-170	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	37.5998670210414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACATACCATGTCTCT	NA	False	NA	9	True	ATTAAA	-21	NA	84617586	84677905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_84617929_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
Isoform_201752_1755	chrX	+	1793	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	13	2	13	-2	multi-exon	FALSE	canonical	3	839	junction_1	0	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTGGAGAGTTTTCT	NA	False	NA	9	True	AATAAA	-21	NA	85235382	85239551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_85236581_85238956
Isoform_201754_28	chrX	+	1874	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	-68	2	-68	-2	multi-exon	FALSE	canonical	3	839	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTGGAGAGTTTTCT	NA	False	NA	9	True	AATAAA	-21	NA	85235301	85239551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_85236581_85238956
Isoform_201767_59	chrX	+	4681	8	FSM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	206	1	206	-1	multi-exon	FALSE	canonical	3	56	junction_6	4.01527694930148	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTTGCCTTGTTTAT	NA	False	NA	3	True	AATAAA	-16	NA	92718913	92793556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
Isoform_201771_34	chrX	+	4867	8	FSM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	20	1	20	-1	multi-exon	FALSE	canonical	3	56	junction_6	4.01527694930148	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTTGCCTTGTTTAT	NA	False	NA	3	True	AATAAA	-16	NA	92718727	92793556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
Isoform_201773_7	chrX	+	2998	3	FSM	ENSMUSG00000081044.9	ENSMUST00000121565.8	2997	3	-1	0	-1	0	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGATTCCAATTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	93012263	93019076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_93013537_93015408_93015640_93017582
Isoform_201774_7	chrX	+	1137	5	NIC	ENSMUSG00000043929.17	novel	627	4	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	18.9868375460475	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTCAGCAGCCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	93278206	93297666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_93278260_93278826_93279027_93285550_93285602_93296020_93296733_93297545
Isoform_201775_8	chrX	+	2077	4	FSM	ENSMUSG00000043929.17	ENSMUST00000096369.10	3944	4	-41	1908	16	-3	multi-exon	FALSE	canonical	3	48	junction_2	6.59966329107444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTCAGCAGCCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	93278551	93297666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020
Isoform_201777_4	chrX	+	4623	4	FSM	ENSMUSG00000043929.17	ENSMUST00000096369.10	3944	4	-17	-662	-17	662	multi-exon	FALSE	canonical	3	48	junction_2	6.59966329107444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	93278575	93300236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020
Isoform_201778_32	chrX	+	1282	5	FSM	ENSMUSG00000043929.17	ENSMUST00000113911.9	1227	5	-62	7	1	-3	multi-exon	FALSE	canonical	3	23	junction_4	15.1224171348366	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTCAGCAGCCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	93278533	93297666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020_93296733_93297545
Isoform_201781_5	chrX	+	1236	4	FSM	ENSMUSG00000043929.17	ENSMUST00000113908.8	1235	4	-4	3	-4	-3	multi-exon	FALSE	canonical	2	6	junction_2	24.3447461820136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTCAGCAGCCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	93278528	93297666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_93278732_93278826_93279027_93296020_93296733_93297545
Isoform_201783_8	chrX	+	796	8	ISM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	7	4297	7	-4297	5prime_fragment	FALSE	canonical	3	325	junction_1	49.0588983794386	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGGCTCATGTTTA	NA	False	NA	NA	False	NA	NA	NA	93410729	93456270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065
Isoform_201784_194	chrX	+	906	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	8	-130	8	-2	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCCTGCTTTCTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	93410730	93460697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
Isoform_201785_4	chrX	+	1043	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	-127	-132	-127	0	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	93410595	93460699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
Isoform_201786_4	chrX	+	838	8	NIC	ENSMUSG00000079508.9	novel	784	9	NA	NA	7	-5	combination_of_known_splicesites	FALSE	canonical	1	23	junction_7	153.64496578217	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCTGGCCTGCTTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	93410729	93460694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93460447
Isoform_201787_4	chrX	+	3609	4	NIC	ENSMUSG00000071723.8	novel	1925	5	NA	NA	-4	3	intron_retention	FALSE	canonical	2	4	junction_1	4.71404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTGGTCATAATTTT	4252	False	NA	5	True	NA	NA	NA	93679670	93686853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_93681987_93682698_93682841_93684531_93685195_93686365
Isoform_201794_3461	chrX	+	3843	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	0	-1	0	1	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	3461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	95139647	95212159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
Isoform_201827_4	chrX	+	4432	21	NIC	ENSMUSG00000031209.15	novel	4611	22	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	3.17962261911693	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGTGATTTTTGTGAT	NA	False	NA	NA	False	ATTAAA	-27	NA	95499980	95618089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_95500222_95506496_95506698_95509415_95509661_95513550_95513764_95514338_95514522_95516417_95516673_95518983_95519153_95527636_95527774_95529832_95529965_95541453_95541663_95542592_95542744_95544112_95544326_95571115_95571330_95573006_95573147_95573899_95574032_95597448_95597556_95598440_95598667_95601115_95601256_95601644_95601808_95614585_95614631_95617173
Isoform_201829_148	chrX	+	3889	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	450	872	4	-872	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTTCAAGGTGTACAAT	NA	False	NA	11	True	NA	NA	NA	97981816	97991751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
Isoform_201835_62	chrX	+	4749	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	455	7	9	-7	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATAAATTTGTGTCT	NA	False	NA	NA	False	AATAAA	-9	NA	97981821	97992616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
Isoform_201837_9	chrX	+	3968	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	362	881	-84	-881	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATTCATCCTTTCAAG	NA	False	NA	2	True	TTTAAA	-39	NA	97981728	97991742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
Isoform_201838_7	chrX	+	5033	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	-701	879	-213	-879	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCATCCTTTCAAGGT	NA	False	NA	4	True	TTTAAA	-41	NA	97980665	97991744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
Isoform_20184_7	chr11	+	3976	3	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	1	1143	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGTAGCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	43572825	43613461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_43573444_43595360_43596305_43611047
Isoform_201845_32	chrX	+	4890	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	72	1	72	-1	multi-exon	FALSE	canonical	3	27	junction_1	6.60016137511158	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGCTCTGGAGAGTTT	NA	False	NA	2	True	AATAAA	-17	NA	98086258	98118333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
Isoform_201847_32	chrX	+	4910	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	53	0	53	0	multi-exon	TRUE	canonical	3	27	junction_1	6.60016137511158	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGGAGAGTTTG	NA	False	NA	3	True	AATAAA	-18	NA	98086239	98118334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
Isoform_201848_47	chrX	+	3345	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	-56	-31	-56	31	multi-exon	FALSE	canonical	3	33	junction_1	5.76085931090146	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAGTGTAAACTAGTG	NA	False	NA	83	True	NA	NA	NA	98179679	98192628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
Isoform_20185_29	chr11	+	3729	3	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	29	924	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	21	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTTAAGAACTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	43572853	43613242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_43573444_43595360_43596305_43611047
Isoform_201857_17	chrX	+	4731	3	FSM	ENSMUSG00000071719.3	ENSMUST00000096363.3	3909	3	-824	2	-824	-2	multi-exon	FALSE	canonical	3	13	junction_2	4.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCTCTCTTGGTGGAT	NA	False	NA	NA	False	AATAAA	-13	NA	98863802	98892394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_98865533_98888994_98889167_98889565
Isoform_201861_10	chrX	+	4979	8	NIC	ENSMUSG00000059327.10	novel	5105	9	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	7.75912892228587	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGACATTATCTTGAGC	NA	False	NA	5	True	AATAAA	-16	NA	99019181	99444366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_99019783_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438750_99440510
Isoform_201862_13	chrX	+	4978	8	FSM	ENSMUSG00000059327.10	ENSMUST00000113779.8	4955	8	-14	-9	-14	7	multi-exon	FALSE	canonical	1	5	junction_1	8.05339325111737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGAGCTCTTCCCAC	NA	False	NA	14	True	AATAAA	-25	NA	99019197	99444375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99019783_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438756_99440510
Isoform_201866_478	chrX	+	1335	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	60	123	-4	-123	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGGTATCCGCTGGTT	NA	False	NA	27	True	AATAAA	-30	NA	99537956	99559608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
Isoform_201867_17	chrX	+	1416	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	-21	123	-21	-123	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGGTATCCGCTGGTT	NA	False	NA	27	True	AATAAA	-30	NA	99537875	99559608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
Isoform_20187_3	chr11	+	3320	3	NNC	ENSMUSG00000044950.8	novel	3277	2	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTGTGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	43572851	43598019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_43573444_43577183_43577253_43595360
Isoform_201879_300	chrX	+	4605	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	378	0	378	0	multi-exon	FALSE	canonical	3	204	junction_20	20.3345386022518	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGAGATCCTTCTAT	NA	False	NA	18	True	AATAAA	-22	NA	99669720	99770820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
Isoform_20188_1078	chr11	+	3556	11	FSM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	13	1	-6	-1	multi-exon	FALSE	canonical	3	286	junction_6	37.2538588605261	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTGTATTCCTGTGATG	9740	False	NA	11	True	AATAAA	-17	NA	44409803	44456346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
Isoform_201880_27	chrX	+	4722	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	259	2	259	-2	multi-exon	TRUE	canonical	3	204	junction_20	20.3345386022518	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGAAGGAGATCCTTCT	NA	False	NA	16	True	AATAAA	-20	NA	99669601	99770818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
Isoform_201882_9	chrX	+	4666	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	377	-60	377	60	multi-exon	FALSE	canonical	3	204	junction_20	20.3345386022518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGGGAAGTCTTAAAGAG	NA	False	NA	78	True	AATAAA	-23	NA	99669719	99770880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
Isoform_201883_7	chrX	+	4724	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	385	-126	385	126	multi-exon	FALSE	canonical	3	204	junction_20	20.3345386022518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGCCTAGTGTTTTGT	NA	False	NA	NA	False	AATACA	-20	NA	99669727	99770946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
Isoform_201886_21	chrX	+	4510	29	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	372	-2	combination_of_known_junctions	FALSE	canonical	3	49	junction_25	40.8997498869654	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGAAGGAGATCCTTCT	NA	False	NA	16	True	AATAAA	-20	NA	99669714	99770818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99762099_99762277_99768247_99768365_99769733_99769857_99770064
Isoform_201892_47	chrX	+	3972	14	FSM	ENSMUSG00000000881.13	ENSMUST00000113735.3	3692	14	-279	-1	-279	-1	multi-exon	FALSE	canonical	3	21	junction_2	29.3332212656995	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGCTCAGAGGTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	99818067	99862015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99818551_99819412_99819570_99819984_99820088_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
Isoform_201894_104	chrX	+	3315	12	FSM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	1	0	1	0	multi-exon	FALSE	canonical	3	72	junction_1	11.5078126534158	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGCTCAGAGGTCTT	700	False	NA	NA	False	AATAAA	-15	NA	99820891	99862014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
Isoform_201896_20	chrX	+	3415	12	FSM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	-99	0	-99	0	multi-exon	FALSE	canonical	3	72	junction_1	11.5078126534158	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGCTCAGAGGTCTT	600	False	NA	NA	False	AATAAA	-15	NA	99820791	99862014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
Isoform_201897_3	chrX	+	3214	11	NIC	ENSMUSG00000000881.13	novel	3316	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	28.8027776438315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAATGGCTCAGAGGTC	699	False	NA	NA	False	AATAAA	-13	NA	99820890	99862012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
Isoform_201898_7	chrX	+	6907	46	NIC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	41	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_39	26.7088000479243	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	False	NA	24	True	AATACA	-15	NA	100317676	100341064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
Isoform_201899_8	chrX	+	6784	46	NIC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_39	26.7088000479243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTTGTATATTA	NA	False	NA	46	True	AATGAA	-34	NA	100317728	100340993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
Isoform_2019_13	chr10	-	6831	3	ISM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	993	4	937	-4	3prime_fragment	FALSE	canonical	3	128	junction_1	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCCCAGGAGTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	42151755	42057840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_42062292_42072461_42073898_42150811
Isoform_201902_9	chrX	+	6735	45	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	7	-11	intron_retention	FALSE	canonical	0	0	junction_39	25.5291924945049	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATTGAACTGTTGGGT	NA	False	NA	35	True	AATGAA	-23	NA	100317841	100340982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
Isoform_201903_8	chrX	+	6983	45	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	41	-6	intron_retention	FALSE	canonical	0	0	junction_39	25.5291924945049	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGTGTGTGAATGTAC	NA	False	NA	25	True	AATACA	-16	NA	100317676	100341065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
Isoform_201906_12	chrX	+	6838	46	NIC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	41	-7	combination_of_known_junctions	TRUE	canonical	2	58	junction_41	20.6676941202185	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAACTGTTGGGTTTTG	NA	False	NA	39	True	AATGAA	-27	NA	100317676	100340986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
Isoform_201908_9	chrX	+	6917	46	NIC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	41	-6	combination_of_known_junctions	FALSE	canonical	2	58	junction_41	20.6676941202185	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGTGTGTGAATGTAC	NA	False	NA	25	True	AATACA	-16	NA	100317676	100341065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
Isoform_201910_11	chrX	+	6991	45	FSM	ENSMUSG00000079487.12	ENSMUST00000087948.11	6809	45	-189	7	41	-7	multi-exon	FALSE	canonical	2	86	junction_14	18.8047135597997	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	False	NA	24	True	AATACA	-15	NA	100317676	100341064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
Isoform_201914_9	chrX	+	1554	2	FSM	ENSMUSG00000047797.15	ENSMUST00000119190.2	1585	2	25	6	25	-6	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGAGGTGTTTTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	100427366	100429229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_100427449_100427757
Isoform_201918_5821	chrX	+	2434	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	128	0	-52	0	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	5821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473288	100492197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
Isoform_201926_218	chrX	+	2437	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-30	-2	combination_of_known_junctions	FALSE	canonical	3	146	junction_9	1051.63693731909	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCTGTGCTGTTTTTT	NA	False	NA	18	True	ATTAAA	-19	NA	100473310	100492195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488424_100488900_100488941_100489724_100489835_100491199
Isoform_20193_13	chr11	+	3446	10	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	114.049155527532	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9740	False	NA	10	True	AATAAA	-16	NA	44409803	44456345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_44410102_44415754_44415971_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
Isoform_201940_593	chrX	+	2406	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-30	-3	combination_of_known_junctions	FALSE	canonical	3	397	junction_1	981.218107867263	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473310	100492194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
Isoform_201973_35	chrX	+	7230	38	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	11	-7	intron_retention	FALSE	canonical	3	145	junction_4	48.5611826331382	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	4126	False	NA	NA	False	AATAAA	-17	NA	100576375	100644633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
Isoform_201974_88	chrX	+	7165	38	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	76	-7	intron_retention	FALSE	canonical	3	145	junction_4	48.5611826331382	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	4191	False	NA	NA	False	AATAAA	-17	NA	100576440	100644633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
Isoform_201975_7	chrX	+	6034	39	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	90	-5	combination_of_known_junctions	FALSE	canonical	3	37	junction_38	62.2286742164482	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	4205	False	NA	NA	False	AATAAA	-19	NA	100576454	100644635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
Isoform_201976_30	chrX	+	7086	38	FSM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	118	6	93	-6	multi-exon	FALSE	canonical	3	80	junction_4	54.4176286265063	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAATCGAGAGTGATTTT	4208	False	NA	NA	False	AATAAA	-18	NA	100576457	100644634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
Isoform_201977_10	chrX	+	7178	38	FSM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	26	6	1	-6	multi-exon	FALSE	canonical	3	80	junction_4	54.4176286265063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAATCGAGAGTGATTTT	4116	False	NA	NA	False	AATAAA	-18	NA	100576365	100644634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
Isoform_201978_3	chrX	+	7168	38	NNC	ENSMUSG00000031314.19	novel	8054	41	NA	NA	11	-7	intron_retention	FALSE	non_canonical	0	0	junction_8	71.1228630669493	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	4126	False	NA	NA	False	AATAAA	-17	NA	100576375	100644633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587764_100590565_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
Isoform_202_14	ERCC-00163	+	526	1	FSM	ERCC-00163A	DQ668359	527	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00163_+_0_500
Isoform_202004_19	chrX	+	5246	23	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	134.849288387119	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	False	NA	13	True	AATAAA	-18	NA	100683698	100727955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
Isoform_202010_29	chrX	+	5215	23	FSM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	33	-1408	-1	-3	multi-exon	FALSE	canonical	3	98	junction_1	138.801667470395	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGGCTTGGTGTAGTT	NA	False	NA	12	True	AATAAA	-17	NA	100683698	100727954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
Isoform_202015_69	chrX	+	5354	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	29	1	-1	-1	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTTGGTGTAGTTTG	NA	False	NA	14	True	AATAAA	-19	NA	100683698	100727956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
Isoform_202025_29	chrX	+	5324	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	162	junction_1	123.579218031398	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTTGGTGTAGTTTG	NA	False	NA	14	True	AATAAA	-19	NA	100683698	100727956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
Isoform_202026_5	chrX	+	8767	21	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	1	-1	intron_retention	FALSE	canonical	3	162	junction_1	115.690740770383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTTGGTGTAGTTTG	NA	False	NA	14	True	AATAAA	-19	NA	100683670	100727956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
Isoform_20203_338	chr11	+	3420	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	25	7	25	-7	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAACGTGGGCCCGCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	45742815	45801445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
Isoform_20204_82	chr11	+	3469	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	-24	7	-24	-7	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAACGTGGGCCCGCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	45742766	45801445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
Isoform_202053_141	chrX	+	2018	7	FSM	ENSMUSG00000046774.18	ENSMUST00000163399.8	1991	7	-22	-5	-22	1	multi-exon	FALSE	canonical	3	67	junction_5	79.7050116924205	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838239	100842249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
Isoform_202054_71	chrX	+	2025	7	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	47	junction_5	86.9329243344162	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838239	100842247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841772_100841947_100841990_100842072
Isoform_202055_219	chrX	+	2201	6	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	236	junction_4	22.2656686403081	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838239	100842247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
Isoform_202057_9	chrX	+	1945	6	FSM	ENSMUSG00000046774.18	ENSMUST00000151231.10	1940	6	0	-5	0	5	multi-exon	FALSE	canonical	2	3	junction_4	112.716280989039	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGCAACTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841947_100841990_100842072
Isoform_202060_27	chrX	+	2814	4	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	266	junction_2	15.121728296285	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838239	100842247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100839695_100840283_100840444_100840965_100841990_100842072
Isoform_202062_9	chrX	+	3070	4	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-27	1	intron_retention	FALSE	canonical	3	236	junction_2	19.4307888557196	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838234	100842249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100840444_100840965_100841368_100841707_100841990_100842072
Isoform_202063_18	chrX	+	3426	3	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-45	-1	intron_retention	FALSE	canonical	3	266	junction_1	8.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838216	100842247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100840444_100840965_100841990_100842072
Isoform_202065_14	chrX	+	3927	2	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-22	1	intron_retention	FALSE	canonical	3	283	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838239	100842249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_100841990_100842072
Isoform_202066_14	chrX	+	560	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	-71	0	-71	0	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTTTTCTATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	101162981	101171275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
Isoform_202067_309	chrX	+	447	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	42	0	42	0	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTTTTCTATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	101163094	101171275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
Isoform_202070_16	chrX	-	1552	9	FSM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	67	-8	67	8	multi-exon	FALSE	canonical	0	0	junction_7	64.8072864344743	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898155	101891236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101897739_101897930_101898030
Isoform_202071_3	chrX	-	2870	8	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	2	7	intron_retention	FALSE	canonical	3	77	junction_7	37.8433937296801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGTCTTCACTGTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	101898220	101891237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101897930_101898030
Isoform_202073_11	chrX	-	1427	8	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	2	8	combination_of_known_splicesites	FALSE	canonical	3	35	junction_7	51.90218429598	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898220	101891236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898030
Isoform_202074_3	chrX	-	1646	8	ISM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	69	-3	69	3	intron_retention	FALSE	canonical	0	0	junction_7	63.8378046781251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCCAGGTCTTCACTG	NA	False	NA	NA	False	AATAAA	-15	NA	101898153	101891241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101897739
Isoform_202076_3	chrX	+	3059	6	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	52	2	intron_retention	FALSE	canonical	3	157	junction_4	15.6894869259642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCCAGGTCTTCACT	NA	False	NA	NA	False	AATAAA	-14	NA	101846620	101853550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
Isoform_202084_8	chrX	+	7321	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	52	2	52	-2	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTGAACCGTGTGGC	NA	False	NA	6	True	AATAAA	-16	NA	102400133	102439696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
Isoform_202085_9	chrX	+	7257	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	121	-3	121	3	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCGTGTGGCTTTGG	NA	False	NA	11	True	AATAAA	-21	NA	102400202	102439701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
Isoform_202086_11	chrX	+	817	7	FSM	ENSMUSG00000031329.5	ENSMUST00000033691.5	812	7	1	-6	1	6	multi-exon	FALSE	canonical	3	20	junction_2	4.2687494916219	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTTTCTGTGTCACTGT	NA	False	NA	7	True	AATAAA	-16	NA	102458073	102468192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_102458253_102459640_102459677_102460356_102460394_102461814_102461897_102464105_102464207_102465593_102465653_102467869
Isoform_202087_6	chrX	+	1545	2	NIC	ENSMUSG00000085715.3	novel	4306	4	NA	NA	-1	162	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAGAAAAAAAAAT	NA	False	NA	NA	False	TTTAAA	-27	NA	102491326	102526174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_102491578_102524880
Isoform_202089_6	chrX	+	7017	7	FSM	ENSMUSG00000073016.4	ENSMUST00000087867.6	2304	7	-14	-4699	-14	4699	multi-exon	FALSE	canonical	2	8	junction_1	1.67497927018682	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATTAAAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	103526409	103555795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103549761
Isoform_202090_769	chrX	+	920	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	19	1699	0	327	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGACTGATCTTAGAAA	NA	False	NA	23	True	AATAAA	-20	NA	104123380	104127093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
Isoform_202099_33	chrX	+	2626	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	19	-7	0	7	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTTTCCAGGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	104123380	104128799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
Isoform_20210_1036	chr11	+	3384	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	7	7	7	-7	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAACGTGGGCCCGCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	45742797	45801445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
Isoform_202105_2221	chrX	+	466	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	43	492	27	0	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	2221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059348	105065564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_105059477_105063184_105063310_105065351
Isoform_202112_18	chrX	+	7863	23	FSM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	-55	-2942	-9	2942	multi-exon	FALSE	canonical	2	29	junction_4	14.4839609212032	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	105070872	105171474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
Isoform_202113_22	chrX	+	7828	24	NNC	ENSMUSG00000033792.13	novel	4866	23	NA	NA	2	2942	at_least_one_novel_splicesite	FALSE	non_canonical	1	6	junction_23	19.5657970928612	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	105070883	105171474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944_105171059_105171082
Isoform_202114_6	chrX	+	4946	23	FSM	ENSMUSG00000033792.13	ENSMUST00000113557.8	4900	23	-45	-1	-45	1	multi-exon	TRUE	canonical	2	41	junction_4	12.997138909572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGCCC	NA	False	NA	NA	False	NA	NA	NA	105070836	105168524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
Isoform_202115_57	chrX	+	7850	23	FSM	ENSMUSG00000033792.13	ENSMUST00000113557.8	4900	23	2	-2952	2	2943	multi-exon	FALSE	canonical	2	41	junction_4	12.997138909572	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGTTGTCAAGT	NA	False	NA	NA	False	NA	NA	NA	105070883	105171475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
Isoform_202116_3	chrX	+	7787	24	NNC	ENSMUSG00000033792.13	novel	4900	23	NA	NA	-6	2942	at_least_one_novel_splicesite	FALSE	non_canonical	1	6	junction_23	18.6212878971611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	105070921	105171474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944_105171059_105171082
Isoform_202119_4311	chrX	+	1759	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	65	1	2	-1	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	4311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCCTGTCATACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	105230770	105247304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
Isoform_202120_811	chrX	+	1810	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	7	8	7	-8	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAAGTTTTTCCTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	105230712	105247297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
Isoform_202136_6	chrX	+	4225	3	FSM	ENSMUSG00000049929.8	ENSMUST00000060576.8	4238	3	12	1	12	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTTTGGTCAGTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	105964242	105977505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_105964596_105967683_105967786_105973735
Isoform_202137_28	chrX	+	2754	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	124	4	-20	-4	multi-exon	FALSE	canonical	3	20	junction_1	2.86744175568088	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTGATTACTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	108139094	108206073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
Isoform_202138_9	chrX	+	2855	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	24	3	24	-3	multi-exon	FALSE	canonical	3	20	junction_1	2.86744175568088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGATTACTTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	108138994	108206074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
Isoform_202139_89	chrX	+	1310	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	49	0	17	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGCTTTGTTTATTTAT	NA	False	NA	7	True	AATAAA	-20	NA	111221079	111282452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
Isoform_202140_198	chrX	+	985	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	49	325	17	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTGGTAAAATCATAA	NA	False	NA	8	True	AATAAA	-16	NA	111221079	111282127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
Isoform_202141_32	chrX	+	1030	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	4	325	4	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTGGTAAAATCATAA	NA	False	NA	8	True	AATAAA	-16	NA	111221034	111282127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
Isoform_202142_11	chrX	+	1345	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	14	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGCTTTGTTTATTTAT	NA	False	NA	7	True	AATAAA	-20	NA	111221044	111282452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
Isoform_202143_4	chrX	+	878	8	NIC	ENSMUSG00000025525.13	novel	1359	9	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	139.560973434992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAGTGGTAAAATCATA	NA	False	NA	7	True	AATAAA	-15	NA	111221080	111282126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_111221134_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
Isoform_202144_8	chrX	+	4249	10	NNC	ENSMUSG00000025529.15	novel	4330	9	NA	NA	204	-3	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_7	4.24264068711928	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTATAATTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	111510426	111544764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_111510603_111512361_111512480_111513964_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111536866_111537002_111537800_111537846_111541522_111541667_111542075
Isoform_202145_5	chrX	+	2559	13	FSM	ENSMUSG00000025592.18	ENSMUST00000067219.5	2520	13	-41	2	-36	-2	multi-exon	FALSE	canonical	0	0	junction_1	3.65148371670111	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCATTTCTCTGAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	112207912	112745588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_112208633_112362154_112362194_112465944_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112662516_112662601_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112745095
Isoform_202147_8	chrX	+	756	2	FSM	ENSMUSG00000050435.3	ENSMUST00000059509.3	743	2	-10	-3	-10	3	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCATTTTTTTTTTCTT	NA	False	NA	4	True	AATAAA	-19	NA	113814698	113815641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_113814900_113815086
Isoform_202148_5	chrX	+	3188	19	NIC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_18	26.5271814941711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGCACACTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	128650494	128943280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128942396
Isoform_202151_32	chrX	+	3774	28	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-5	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	24.3627140962256	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGTAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	128650539	129361943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_202152_3	chrX	+	3912	28	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-89	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	24.3627140962256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGTAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	128650401	129361943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_202154_4	chrX	+	8299	28	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-17	-123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	29.952225334174	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCTGTCAATTTGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	128650527	129366457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867379_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_202155_36	chrX	+	8383	28	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-6	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	24.3627140962256	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTTCAGTCTCTGATT	NA	False	NA	NA	False	AATAAA	-15	NA	128650566	129366579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_202157_3	chrX	+	4120	19	NNC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	-21	-41302	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_18	25.5326588248593	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTTATCGTCTTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	128650523	128901977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128900132
Isoform_202158_5	chrX	+	3795	27	FSM	ENSMUSG00000034480.19	ENSMUST00000167619.9	8439	27	4	4640	4	-6	multi-exon	FALSE	non_canonical	0	0	junction_23	27.9511672650587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAGTAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	128650494	129361940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_202159_15	chrX	+	8403	27	FSM	ENSMUSG00000034480.19	ENSMUST00000167619.9	8439	27	36	0	-18	0	multi-exon	FALSE	non_canonical	0	0	junction_23	27.9511672650587	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCAGTCTCTGATTC	NA	False	NA	NA	False	AATAAA	-16	NA	128650526	129366580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_202161_3	chrX	+	3732	27	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-3	-10	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_23	29.6483333197509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGATCAAAGTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128650541	129361936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_128650866_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_202162_3	chrX	+	8375	27	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-2	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_23	29.6483333197509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCAGTCTCTGATTC	NA	False	NA	NA	False	AATAAA	-16	NA	128650542	129366580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_128650866_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_202171_78	chrX	+	2730	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	-8	-5	-8	5	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGCTTTTTAAAAAAT	NA	False	NA	9	True	AATAAA	-24	NA	132959955	132976617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
Isoform_202173_125	chrX	+	2583	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	134	0	15	0	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	4	True	AATAAA	-19	NA	132960097	132976612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
Isoform_202178_418	chrX	+	4353	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	152	-3	15	3	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132960097	132987571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_202181_366	chrX	+	4495	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	10	-3	-8	3	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132959955	132987571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_202193_144	chrX	+	4275	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	162	-776	15	3	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132960097	132987571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_202197_69	chrX	+	4417	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	20	-776	-8	3	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132959955	132987571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_202198_70	chrX	+	2052	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	20	1589	-8	-1589	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTGATATACATAATCC	NA	False	NA	26	True	AATAAA	-26	NA	132959955	132985206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_202219_3	chrX	+	1757	2	FSM	ENSMUSG00000033578.8	ENSMUST00000037687.8	1918	2	160	1	160	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACATGGTGTGGATATGG	NA	False	NA	5	True	AATAAA	-17	NA	133196133	133206717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133196379_133205205
Isoform_202220_282	chrX	+	3140	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	91	-4	20	4	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGAATTTTTTTTTTTT	NA	False	NA	10	True	AATAAA	-21	NA	133208923	133263392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
Isoform_202222_9	chrX	+	3248	22	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	-1	0	intron_retention	FALSE	canonical	3	156	junction_8	43.2155384837434	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTATTTCCGAATTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	133208902	133263386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_133208978_133209314_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
Isoform_202223_91	chrX	+	3095	22	FSM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	-9	-1	-9	0	multi-exon	FALSE	canonical	3	75	junction_1	51.4515821537341	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTATTTCCGAATTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	133208894	133263386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
Isoform_202226_20	chrX	+	3593	21	NIC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	-10	0	intron_retention	FALSE	canonical	3	156	junction_7	44.2429655425583	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	133208893	133263385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
Isoform_202230_3930	chrX	+	446	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	32	5	-3	-5	multi-exon	FALSE	canonical	3	10431	junction_4	1336.12412877696	3930	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCTGAAGTTTTTCTC	NA	False	NA	70	True	ATTAAA	-11	NA	133486434	133488800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
Isoform_202240_47	chrX	+	4457	2	ISM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	-45	-1	16	1	intron_retention	FALSE	canonical	3	894	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTGCATAGTTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	133501989	133507804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_133502083_133503440
Isoform_202242_356	chrX	+	2409	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	-45	0	16	0	multi-exon	FALSE	canonical	3	164	junction_3	339.283886377699	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTTGCATAGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133501989	133507803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
Isoform_202245_1026	chrX	+	2366	3	FSM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	62	-2	16	2	multi-exon	FALSE	canonical	3	597	junction_2	148.5	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTGCATAGTTTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	133501989	133507805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133502083_133503440_133503512_133505603
Isoform_202251_6	chrX	+	2571	6	FSM	ENSMUSG00000049804.10	ENSMUST00000124226.3	7996	6	17	5408	17	-5408	multi-exon	FALSE	canonical	2	4	junction_2	2.44948974278318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGCCTAAGGCAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	133587284	133592098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133587387_133587896_133587975_133588765_133588856_133589198_133589282_133589568_133589654_133589965
Isoform_202252_5	chrX	+	7948	6	FSM	ENSMUSG00000049804.10	ENSMUST00000124226.3	7996	6	44	4	44	-4	multi-exon	FALSE	canonical	2	4	junction_2	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGAGATATTGTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	133587311	133597502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133587387_133587896_133587975_133588765_133588856_133589198_133589282_133589568_133589654_133589965
Isoform_202253_4	chrX	+	8106	6	FSM	ENSMUSG00000049804.10	ENSMUST00000124226.3	7996	6	-115	5	-115	-5	multi-exon	FALSE	canonical	2	4	junction_2	2.44948974278318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGAAGAGATATTGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	133587152	133597501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133587387_133587896_133587975_133588765_133588856_133589198_133589282_133589568_133589654_133589965
Isoform_202255_11	chrX	+	2248	6	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	59.4151495832502	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAGCACTGTCTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133618743	133622658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619742_133620375_133620475_133620823
Isoform_202256_5	chrX	+	2366	6	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	30.440762145518	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAAAAAAGCACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	133618736	133622653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619858_133620375_133620475_133620823
Isoform_202259_33	chrX	+	2191	5	NNC	ENSMUSG00000033460.15	novel	2228	5	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	54.8925085963467	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAGCACTGTCTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133618708	133622658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620823
Isoform_202261_5	chrX	+	2317	5	NIC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.5181111881864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAAGCACTGTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	133618738	133622657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_133618800_133619474_133619568_133619668_133619858_133620375_133620475_133620782
Isoform_202263_16	chrX	+	2314	5	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	26.9664142963057	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCACTGTCTTTGTC	NA	False	NA	NA	False	AATAAA	-21	NA	133618703	133622660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_133618800_133619474_133619568_133619668_133619858_133620375_133620475_133620823
Isoform_202265_72	chrX	+	2165	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	-77	-3	-27	1	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCACTGTCTTTGTC	NA	False	NA	NA	False	AATAAA	-21	NA	133618684	133622660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
Isoform_202267_73	chrX	+	2124	4	NNC	ENSMUSG00000033460.15	novel	2085	4	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_3	34.8839345385363	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCACTGTCTTTGTC	NA	False	NA	NA	False	AATAAA	-21	NA	133618684	133622660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_133618800_133619668_133619742_133620375_133620475_133620823
Isoform_202268_31	chrX	+	2262	4	FSM	ENSMUSG00000033460.15	ENSMUST00000051256.10	2253	4	-15	6	-8	1	multi-exon	FALSE	canonical	3	48	junction_2	53.7463177033243	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCACTGTCTTTGTC	NA	False	NA	NA	False	AATAAA	-21	NA	133618703	133622660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133618800_133619668_133619858_133620375_133620475_133620782
Isoform_202270_15	chrX	+	2213	4	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	53.074371299987	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618710	133622659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_133618800_133619668_133619858_133620375_133620475_133620823
Isoform_202278_24	chrX	+	3369	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	-11	-31	-11	1	multi-exon	FALSE	canonical	2	7	junction_1	4.81534007106456	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGTGTAGAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	133657332	133662205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
Isoform_202281_24	chrX	+	3669	5	FSM	ENSMUSG00000067360.13	ENSMUST00000118821.8	3698	5	30	-1	21	1	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCATGAGATTCATTTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	134203085	134213402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
Isoform_202282_10	chrX	+	3820	5	NNC	ENSMUSG00000067360.13	novel	3698	5	NA	NA	21	160	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	62.9563340737054	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTTCTTCGTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	134203085	134213561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_134203188_134203385_134203505_134208081_134208382_134209685_134210271_134210847
Isoform_202284_3	chrX	+	3654	7	NIC	ENSMUSG00000087428.2	novel	632	6	NA	NA	4	4737	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	13.228756555323	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134230513	134254613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_134230653_134232087_134232178_134233599_134233689_134238796_134238896_134249759_134250060_134250503_134251086_134252258
Isoform_202286_21	chrX	+	3818	5	FSM	ENSMUSG00000094004.8	ENSMUST00000180198.2	3836	5	25	-7	25	7	multi-exon	FALSE	canonical	3	42	junction_2	73.5272058492637	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134274057	134284149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134274160_134274357_134274477_134278675_134278976_134280276_134280862_134281437
Isoform_202287_95	chrX	+	3826	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	25	-174	25	174	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334608	134344753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
Isoform_202291_3	chrX	+	3881	6	NNC	ENSMUSG00000094004.8	novel	3677	5	NA	NA	25	7	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	91.5283562618711	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134274057	134284149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_134274160_134274357_134274485_134278123_134278179_134278675_134278976_134280276_134280862_134281437
Isoform_202294_30	chrX	+	3818	5	FSM	ENSMUSG00000096508.8	ENSMUST00000179953.2	3519	5	25	-324	25	174	multi-exon	FALSE	canonical	3	42	junction_2	73.4825659595526	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334608	134344753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134334711_134334908_134335028_134339279_134339580_134340880_134341466_134342041
Isoform_202298_79	chrX	+	3668	5	FSM	ENSMUSG00000094004.8	ENSMUST00000113173.8	3677	5	25	-16	25	16	multi-exon	FALSE	canonical	3	153	junction_2	39.7955713616478	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134274057	134283991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134274160_134274357_134274485_134278675_134278976_134280276_134280862_134281437
Isoform_202299_3	chrX	-	3669	5	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	30	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	91.6801505234366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTAAGTCCATGAGAT	NA	False	NA	NA	False	AGTAAA	-9	NA	134078351	134068379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134077924_134078052_134078249
Isoform_202302_123	chrX	+	3829	5	FSM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	30	-161	30	161	multi-exon	FALSE	canonical	3	112	junction_2	53.6516542149448	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134395366	134405504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134395469_134395666_134395786_134400016_134400317_134401619_134402205_134402781
Isoform_202304_3	chrX	+	3545	4	NIC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	30	-4	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	96.7551319339473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGTCCATGAGATTCA	NA	False	NA	NA	False	AGTAAA	-12	NA	134395366	134405339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_134395469_134400016_134400317_134401619_134402205_134402781
Isoform_202308_24	chrX	+	2807	4	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	31.6789449880446	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTTCCAGTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	134643485	134648074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134645667
Isoform_202309_7	chrX	+	5292	6	NIC	ENSMUSG00000043384.16	novel	5640	10	NA	NA	-40	4386	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	15.9549365401433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGATTGAGTGCCC	NA	False	NA	NA	False	ATTAAA	-11	NA	134643441	134667125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134649404_134649532_134652693_134652767_134662477
Isoform_202310_111	chrX	+	2792	4	FSM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	-20	7	-20	-7	multi-exon	FALSE	canonical	3	91	junction_3	8.05536398239638	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAATGAAAACATTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	134643461	134648064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134645667
Isoform_202314_15	chrX	+	5245	6	FSM	ENSMUSG00000043384.16	ENSMUST00000149595.8	837	6	-14	-4394	-14	4394	multi-exon	FALSE	canonical	3	40	junction_5	28.5629130167075	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTGCCCGTGTCTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	134643467	134667133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134662477
Isoform_202315_4	chrX	+	5630	10	FSM	ENSMUSG00000043384.16	ENSMUST00000113147.8	5611	10	-26	7	-26	1	multi-exon	TRUE	canonical	3	21	junction_5	46.6923209907815	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643455	134704216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
Isoform_202319_7	chrX	+	5215	5	NIC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-43	4387	combination_of_known_junctions	TRUE	canonical	3	29	junction_1	13.3299474867683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGATTGAGTGCCCG	NA	False	NA	NA	False	ATTAAA	-12	NA	134643438	134667126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134662477
Isoform_202321_89	chrX	+	5313	7	ISM	ENSMUSG00000043384.16	ENSMUST00000113144.8	5843	11	53409	7	-1446	1	3prime_fragment	FALSE	canonical	0	0	junction_1	59.1326193117358	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9792	False	NA	11	True	AATAAA	-18	NA	134696890	134704216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
Isoform_202322_17	chrX	+	5221	6	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1443	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	60.7302231183124	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9795	False	NA	11	True	AATAAA	-18	NA	134696893	134704216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_134697086_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
Isoform_202323_4	chrX	+	6437	5	FSM	ENSMUSG00000043384.16	ENSMUST00000166554.2	4993	5	-1443	-1	-1443	1	multi-exon	FALSE	canonical	3	120	junction_2	19.765816451642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9795	False	NA	11	True	AATAAA	-18	NA	134696893	134704216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
Isoform_202325_11	chrX	+	3777	7	FSM	ENSMUSG00000072966.12	ENSMUST00000173804.8	3814	7	32	5	10	-1	multi-exon	FALSE	canonical	0	0	junction_1	54.6669207311169	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739814	134745474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134740012_134740493_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
Isoform_202328_39	chrX	+	3738	7	NIC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.6669207311169	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGACCCTTCTTCACTT	NA	False	NA	NA	False	AATAAA	-21	NA	134739817	134745476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
Isoform_202329_8	chrX	+	3796	7	NIC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	-25	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	54.6669207311169	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739757	134745474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
Isoform_20233_563	chr11	+	6329	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	51	3	-15	-3	multi-exon	FALSE	canonical	3	430	junction_20	39.4256282802095	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTCTGTTTGGATG	NA	False	NA	12	True	ATTAAA	-17	NA	45946869	46038167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
Isoform_202330_3	chrX	+	4268	6	NIC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	20	junction_3	46.9680742632695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739805	134745474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
Isoform_202331_9	chrX	+	3794	7	NNC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.103090257134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739814	134745474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741444_134741601_134741678_134741922_134742053_134742326
Isoform_202332_110	chrX	+	2795	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	18	-1	16	1	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGTTTGTGTATAT	NA	False	NA	8	True	AATAAA	-19	NA	134786617	134791828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
Isoform_202333_231	chrX	+	2696	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	117	-1	-15	1	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGTTTGTGTATAT	NA	False	NA	8	True	AATAAA	-19	NA	134786716	134791828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
Isoform_202336_38	chrX	+	2706	5	FSM	ENSMUSG00000072964.15	ENSMUST00000068755.14	2823	5	115	2	-15	1	multi-exon	FALSE	canonical	3	24	junction_1	79.1296404642407	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGTTTGTGTATAT	NA	False	NA	8	True	AATAAA	-19	NA	134786716	134791828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134786847_134787593_134787676_134788009_134788067_134789120_134789229_134789499
Isoform_202337_19	chrX	+	2791	5	FSM	ENSMUSG00000072964.15	ENSMUST00000068755.14	2823	5	29	3	29	0	multi-exon	FALSE	canonical	3	24	junction_1	79.1296404642407	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTGTTTGTGTATA	NA	False	NA	7	True	AATAAA	-18	NA	134786630	134791827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134786847_134787593_134787676_134788009_134788067_134789120_134789229_134789499
Isoform_202339_1852	chrX	+	781	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	49	7	49	-7	multi-exon	FALSE	canonical	3	2369	junction_2	964	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAATATATGCTCAGTC	NA	False	NA	NA	False	AATAAA	-10	NA	135039793	135041185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135039916_135040271_135040349_135040603
Isoform_202342_123	chrX	+	823	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	7	7	7	-7	multi-exon	FALSE	canonical	3	2369	junction_2	964	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAATATATGCTCAGTC	NA	False	NA	NA	False	AATAAA	-10	NA	135039751	135041185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135039916_135040271_135040349_135040603
Isoform_202347_3	chrX	+	1283	4	NNC	ENSMUSG00000079428.9	novel	453	4	NA	NA	435	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	3.55902608401044	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTAAGACTTGATC	NA	False	NA	NA	False	AATAAA	-12	NA	135115962	135126843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_135116173_135121881_135122041_135125650_135125722_135126000
Isoform_202348_1535	chrX	+	961	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	48	10	48	-10	multi-exon	FALSE	canonical	3	2732	junction_2	36	1535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAGAATCCAACAGCC	NA	False	NA	-2	True	AATAAA	-14	NA	135145875	135147878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135145977_135146449_135146516_135147084
Isoform_20235_309	chr11	+	6354	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	26	3	26	-3	multi-exon	TRUE	canonical	3	430	junction_20	39.4256282802095	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTCTGTTTGGATG	NA	False	NA	12	True	ATTAAA	-17	NA	45946844	46038167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
Isoform_202357_402	chrX	+	874	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	37	19	-7	-5	multi-exon	FALSE	canonical	3	4289	junction_2	392	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGCCACAAGAAC	NA	False	NA	NA	False	AATAAA	-13	NA	135171046	135172708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135171151_135171558_135171632_135172011
Isoform_202358_1891	chrX	+	829	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	37	64	-7	-6	multi-exon	FALSE	canonical	3	4289	junction_2	392	1891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTATTGTGTCCTTA	NA	False	NA	NA	False	AATAAA	-10	NA	135171046	135172663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135171151_135171558_135171632_135172011
Isoform_202359_36	chrX	+	865	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	1	64	1	-6	multi-exon	FALSE	canonical	3	4289	junction_2	392	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTATTGTGTCCTTA	NA	False	NA	NA	False	AATAAA	-10	NA	135171010	135172663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135171151_135171558_135171632_135172011
Isoform_202363_85	chrX	+	795	3	FSM	ENSMUSG00000046432.13	ENSMUST00000178632.8	933	3	74	64	22	-6	multi-exon	FALSE	canonical	3	238	junction_2	2417.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTATTGTGTCCTTA	NA	False	NA	NA	False	AATAAA	-10	NA	135171075	135172663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135171151_135171558_135171632_135172016
Isoform_202365_287	chrX	+	828	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	-7	5	-7	-5	multi-exon	FALSE	canonical	3	533	junction_2	2270	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGCCACAAGAAC	NA	False	NA	NA	False	AATAAA	-13	NA	135171046	135172708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135171151_135171558_135171632_135172057
Isoform_202368_8	chrX	+	1184	2	FSM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	13	1606	13	-1606	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAATGTTTCTTCTGAAT	NA	False	NA	NA	False	AATAAA	-24	NA	135608743	135610621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135608838_135609531
Isoform_202370_3	chrX	+	2918	11	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.76729235765982	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATAAAAATGAGTGTCA	NA	False	NA	NA	False	AATAAA	-14	NA	135642595	135704102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135661538_135662838_135689269_135689367_135703600
Isoform_202372_3	chrX	+	2234	4	FSM	ENSMUSG00000031428.12	ENSMUST00000113067.8	2259	4	23	2	19	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGGCAGGGGTGTTCTA	7924	False	NA	5	True	AATAAA	-21	NA	135893926	135897125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135894102_135894455_135894511_135894679_135894820_135895261
Isoform_202377_51	chrX	+	8300	6	FSM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	22	junction_5	9.32523458149981	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCATGTGTGTGTTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	135950341	135983252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
Isoform_202380_8	chrX	+	4169	4	FSM	ENSMUSG00000042515.14	ENSMUST00000113042.3	4182	4	11	2	11	0	multi-exon	FALSE	canonical	1	1	junction_1	3.29983164553722	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTGTATTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	138117925	138139082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_138117964_138132034_138132164_138134427_138134595_138135247
Isoform_202385_2600	chrX	+	998	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	178	2	178	-2	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	2600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTTTCACGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	138234609	138238916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_138235157_138237570_138237800_138238694
Isoform_202386_117	chrX	+	1112	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	64	2	64	-2	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTTTCACGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	138234495	138238916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_138235157_138237570_138237800_138238694
Isoform_202393_30	chrX	+	1224	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	-48	2	-48	-2	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTTTCACGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	138234383	138238916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_138235157_138237570_138237800_138238694
Isoform_202397_163	chrX	+	2739	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	2	9	2	-2	multi-exon	FALSE	canonical	3	69	junction_2	9.49853789918334	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTATCTGGTGTTCG	NA	False	NA	NA	False	AATAAA	-13	NA	138511370	138573885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
Isoform_202400_4	chrX	+	5959	21	FSM	ENSMUSG00000042473.9	ENSMUST00000096313.4	5094	21	-40	-825	-40	825	multi-exon	FALSE	canonical	0	0	junction_6	1.5644487847162	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCCAAATGTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	138585704	138654979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_138586060_138601747_138601859_138605350_138605470_138606704_138606931_138607865_138608107_138613002_138613211_138614003_138614169_138624651_138624802_138625826_138625978_138626412_138626628_138633006_138633125_138634703_138634990_138637037_138637168_138637702_138637802_138642675_138642745_138642900_138643142_138644104_138644171_138645956_138646041_138647099_138647157_138650696_138650795_138652209
Isoform_202401_2878	chrX	+	1953	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	12	0	12	0	multi-exon	FALSE	canonical	3	1771	junction_6	191.019850626403	2878	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357373	139376889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
Isoform_202415_82	chrX	+	2115	13	FSM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	11	76	11	-1	multi-exon	FALSE	canonical	2	18	junction_1	12.4707992259251	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTGGTTGAGAACTAT	NA	False	NA	NA	False	AATAAA	-15	NA	139857666	139947190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
Isoform_202418_3	chrX	+	4494	12	NIC	ENSMUSG00000079418.6	novel	2202	13	NA	NA	10	-1	intron_retention	FALSE	canonical	2	18	junction_1	12.7946269714612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTGGTTGAGAACTAT	NA	False	NA	NA	False	AATAAA	-15	NA	139857665	139947190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139945572_139946236
Isoform_202419_3	chrX	+	2130	13	NIC	ENSMUSG00000079418.6	novel	2202	13	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	21.1797859605175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTGGTTGAGAACTAT	NA	False	NA	NA	False	AATAAA	-15	NA	139857665	139947190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_139857721_139887027_139887139_139889028_139889115_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
Isoform_202420_489	chrX	+	2532	5	FSM	ENSMUSG00000042271.14	ENSMUST00000112916.9	2532	5	-1	1	-1	-1	multi-exon	FALSE	canonical	3	188	junction_1	39.4865483424419	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCAAGTCTTTCTT	NA	False	NA	10	True	AATAAA	-21	NA	141009764	141022687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_141009928_141011286_141011378_141012519_141012607_141019779_141019925_141020641
Isoform_202422_14	chrX	+	2435	4	NIC	ENSMUSG00000042271.14	novel	2532	5	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	108.812785196512	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCTCAAGTCTTTCT	NA	False	NA	9	True	AATAAA	-20	NA	141009773	141022686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_141009928_141011286_141011378_141019779_141019925_141020641
Isoform_202423_14	chrX	+	2454	5	FSM	ENSMUSG00000042271.14	ENSMUST00000042329.12	2447	5	-8	1	-8	-1	multi-exon	FALSE	canonical	3	12	junction_1	115.070358911407	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCAAGTCTTTCTT	NA	False	NA	10	True	AATAAA	-21	NA	141010924	141022687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_141011010_141011286_141011378_141012519_141012607_141019779_141019925_141020641
Isoform_202424_120	chrX	+	2455	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	28	1	-22	-1	multi-exon	FALSE	canonical	3	263	junction_3	9.93310961716756	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCAAGTCTTTCTT	NA	False	NA	10	True	AATAAA	-21	NA	141011200	141022687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
Isoform_202426_4	chrX	+	2745	2	ISM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	-35	153377	-23	-86429	5prime_fragment	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141464378	141467857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_141464553_141465286
Isoform_202427_62	chrX	+	5283	7	FSM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	-2	-132	1	132	multi-exon	FALSE	canonical	3	33	junction_2	37.6592913133296	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGAGTCCTGGCCTTG	NA	False	NA	4	True	ATTAAA	-13	NA	141464411	141621366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_141464553_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
Isoform_202430_126	chrX	+	4623	6	ISM	ENSMUSG00000047045.18	ENSMUST00000112889.8	1742	7	10	5125	1	131	5prime_fragment	FALSE	canonical	3	60	junction_1	22.0599184042009	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGGAGTCCTGGCCTT	NA	False	NA	3	True	ATTAAA	-12	NA	141464411	141621365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
Isoform_202432_9	chrX	+	4599	5	FSM	ENSMUSG00000047045.18	ENSMUST00000101198.9	4443	5	-24	-132	-15	132	multi-exon	FALSE	canonical	0	0	junction_1	49.9218138692896	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGAGTCCTGGCCTTG	NA	False	NA	4	True	ATTAAA	-13	NA	141464386	141621366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_141464553_141553962_141554030_141588985_141589065_141615496_141615598_141617180
Isoform_202434_15	chrX	+	5189	7	FSM	ENSMUSG00000047045.18	ENSMUST00000112896.9	5224	7	166	-131	166	131	multi-exon	FALSE	canonical	2	8	junction_1	44.5474154381848	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGGAGTCCTGGCCTT	NA	False	NA	3	True	ATTAAA	-12	NA	141464887	141621365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_141464936_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
Isoform_202441_182	chrX	+	4163	27	FSM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	1	4	1	1	multi-exon	FALSE	canonical	3	214	junction_1	235.310423828037	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143101019	143157442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_202446_29	chrX	+	4114	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	299.952273536975	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143100998	143157441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_202451_24	chrX	+	425	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	22	32	2	-5	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCCCTAAGTCCAGTT	NA	False	NA	8	True	AATAAA	-15	NA	143101020	143107141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
Isoform_202452_23	chrX	+	1472	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	22	-1015	2	-5	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGACTTGGCTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	143101020	143108188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
Isoform_202454_762	chrX	+	4059	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	189.502244292029	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143101020	143157443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_202461_93	chrX	+	4003	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	266.015115360011	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143101005	143157441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_202469_274	chrX	+	3856	25	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	2	combination_of_known_junctions	TRUE	canonical	3	134	junction_1	227.828696459765	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143118806	143157443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_202472_28	chrX	+	3764	24	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-36	1	combination_of_known_junctions	FALSE	canonical	3	128	junction_19	302.220546917654	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118828	143157442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_202474_299	chrX	+	3912	24	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17939	5	93	0	3prime_fragment	FALSE	canonical	3	957	junction_21	118.352985224418	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118957	143157441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_202476_91	chrX	+	3954	24	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17899	3	53	2	3prime_fragment	FALSE	canonical	3	957	junction_21	118.352985224418	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143118917	143157443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_202483_38	chrX	+	3837	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	101	2	combination_of_known_junctions	FALSE	canonical	3	128	junction_18	237.652139178671	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143118965	143157443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_202525_30	chrX	+	2042	7	FSM	ENSMUSG00000095872.8	ENSMUST00000178833.2	1350	7	-93	-599	-93	-2	multi-exon	TRUE	canonical	0	0	junction_3	6.15539510420646	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTGTTTGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	146572630	146616450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_146572740_146589721_146589848_146590566_146590647_146594315_146595275_146608125_146608208_146609013_146609064_146615814
Isoform_202526_10	chrX	+	2043	7	FSM	ENSMUSG00000072930.4	ENSMUST00000112796.2	2028	7	-16	1	-16	-1	multi-exon	TRUE	canonical	0	0	junction_3	7.43303437365925	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTGTTTGTGTGTGT	1193	False	NA	NA	False	AATAAA	-18	NA	146963703	147007705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_146963812_146980956_146981083_146981801_146981882_146985542_146986502_146999377_146999460_147000265_147000316_147007067
Isoform_202527_11	chrX	+	2041	7	FSM	ENSMUSG00000096834.8	ENSMUST00000101186.10	2026	7	-16	1	-16	-1	multi-exon	TRUE	canonical	0	0	junction_1	5.30461015427985	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	147446577	147486844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_147446686_147463739_147463866_147464585_147464666_147468313_147469273_147478430_147478513_147479317_147479368_147486208
Isoform_202528_39	chrX	+	2041	7	FSM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	-16	0	-16	0	multi-exon	FALSE	canonical	1	5	junction_3	4.85626742811116	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147665555	147707135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_147665664_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
Isoform_202530_23	chrX	+	2044	7	FSM	ENSMUSG00000095621.2	ENSMUST00000178169.2	2028	7	-16	0	-16	0	multi-exon	TRUE	canonical	0	0	junction_1	6.67707520800338	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	148230596	148270780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_148230705_148247706_148247833_148248551_148248632_148252302_148253262_148262449_148262532_148263337_148263388_148270141
Isoform_202531_72	chrX	+	1993	7	FSM	ENSMUSG00000072923.7	ENSMUST00000101181.5	1977	7	-16	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_1	5.06622805119022	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148377549	148419760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
Isoform_202532_181	chrX	+	2050	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	-17	-4	-17	4	multi-exon	FALSE	canonical	1	1	junction_6	4.6785562825394	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	148567451	148609694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
Isoform_202534_19	chrX	+	2043	7	FSM	ENSMUSG00000095082.2	ENSMUST00000112740.2	2026	7	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_3	4.07226390762354	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148724633	148767978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_148724743_148744867_148744994_148745713_148745794_148749452_148750412_148759566_148759649_148760454_148760505_148767341
Isoform_202535_23	chrX	+	2060	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_2	17.6227126175286	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371242	149426874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_149371339_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
Isoform_202536_72	chrX	+	1903	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	10.2058806577385	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371242	149426874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_149371339_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
Isoform_202540_253	chrX	+	4248	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-248	1	-248	-1	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGAGCACTGCTATG	NA	False	NA	19	True	AATACA	-22	NA	149829917	149872516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
Isoform_202544_152	chrX	+	4412	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-248	-163	-248	163	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGGTCTTAAGCCTCAT	NA	False	NA	11	True	ATTAAA	-20	NA	149829917	149872680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
Isoform_202548_82	chrX	+	4441	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-276	-164	-276	164	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAAGCCTCATC	NA	False	NA	12	True	ATTAAA	-21	NA	149829889	149872681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
Isoform_202551_127	chrX	+	4279	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-281	3	-281	-3	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTCAGAGCACTGCTA	NA	False	NA	17	True	AATACA	-20	NA	149829884	149872514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
Isoform_202579_5	chrX	+	3061	15	ISM	ENSMUSG00000025262.9	ENSMUST00000073364.6	5463	16	18	4003	18	-4003	5prime_fragment	FALSE	canonical	2	7	junction_7	3.90447153391899	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAATAAACAAGTA	NA	False	NA	NA	False	NA	NA	NA	150127188	150250835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150211912_150212013_150212832_150212910_150213386_150213665_150214465_150214740_150215597_150215770_150219140_150219391_150240717_150240833_150246964_150247175_150248278_150248481_150250295_150250435_150250794
Isoform_202581_7	chrX	+	1272	5	NNC	ENSMUSG00000025262.9	novel	5823	15	NA	NA	55	-66102	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	5.22015325445528	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTTTGTCAGGTATT	NA	False	NA	NA	False	NA	NA	NA	150127225	150188736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150188630
Isoform_202583_73	chrX	+	5733	22	FSM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	-7	2	-1	0	multi-exon	FALSE	canonical	3	62	junction_12	12.6336842339938	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150304175	150416853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
Isoform_202586_37	chrX	+	5430	21	NIC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_12	14.924727803213	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150304175	150416853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
Isoform_202587_7	chrX	+	5857	22	FSM	ENSMUSG00000041229.16	ENSMUST00000168501.8	6359	22	502	0	5	0	multi-exon	TRUE	canonical	2	12	junction_1	20.027645292538	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150304169	150416853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_150304434_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
Isoform_202590_5	chrX	+	4513	25	FSM	ENSMUSG00000025261.19	ENSMUST00000130243.8	5010	25	-21	518	-1	-3	multi-exon	FALSE	canonical	3	76	junction_1	19.9095175453573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCCCATTTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	150586321	150656026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
Isoform_202592_3	chrX	+	3055	24	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	-2	63612	-2	-393	5prime_fragment	TRUE	canonical	3	45	junction_16	23.5043333494141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGCGTGTAGTTTTGC	NA	False	NA	NA	False	AGTAAA	-23	NA	150586320	150654801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
Isoform_202593_3	chrX	+	4281	24	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	-2	62386	-2	-2	5prime_fragment	FALSE	canonical	3	45	junction_16	23.5043333494141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCCATTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	150586320	150656027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
Isoform_202594_3	chrX	+	8397	45	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	87440	913	8181	-913	3prime_fragment	FALSE	canonical	3	173	junction_4	142.661724960113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150673762	150717500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
Isoform_202597_8	chrX	+	6690	34	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	69173	531	-573	-531	3prime_fragment	FALSE	canonical	3	218	junction_2	127.712688336622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150687416	150717882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
Isoform_2026_117	chr10	-	6786	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	58	4	2	-4	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCCCAGGAGTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	42152690	42057840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
Isoform_202605_5	chrX	+	5868	30	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-1565	-913	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_19	127.304320476135	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150690275	150717500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
Isoform_202608_6	chrX	+	6036	29	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-66	-529	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_18	126.137573704269	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150691774	150717884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
Isoform_202638_9	chrX	+	3905	18	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	83377	531	-2657	-531	3prime_fragment	FALSE	canonical	3	344	junction_7	92.6057237388929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150701620	150717882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
Isoform_202647_12	chrX	+	3573	17	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	84358	530	-1676	-530	3prime_fragment	FALSE	canonical	3	344	junction_6	88.4742194088199	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACTTTTCACAACGGAG	NA	False	NA	26	True	AATAAA	-15	NA	150702601	150717883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
Isoform_202688_1075	chrX	+	902	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	57	3	57	-3	multi-exon	FALSE	canonical	3	1359	junction_1	187.651165730459	1075	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTGTGCAGTCTTGT	NA	False	NA	13	True	AATAAA	-13	NA	150784897	150787435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
Isoform_2027_25	chr10	-	6847	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	-3	4	0	-4	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCCCAGGAGTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	42152751	42057840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
Isoform_202703_1116	chrX	+	3899	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	66	726	66	-726	multi-exon	FALSE	canonical	3	535	junction_3	101.202320735358	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCCTAATCTAAATTT	NA	False	NA	15	True	AATAAA	-19	NA	150799489	150844964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
Isoform_202704_30	chrX	+	3970	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	-5	726	-5	-726	multi-exon	TRUE	canonical	3	535	junction_3	101.202320735358	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCCTAATCTAAATTT	NA	False	NA	15	True	AATAAA	-19	NA	150799418	150844964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
Isoform_202714_185	chrX	+	3614	23	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	48	-727	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	147.492463737996	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150799471	150844963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
Isoform_20273_8	chr11	+	1143	4	NNC	ENSMUSG00000020397.16	novel	331	4	NA	NA	12	4	at_least_one_novel_splicesite	TRUE	canonical	3	45	junction_2	207.467802053449	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTCATTCTTGGAAAAA	NA	False	NA	16	True	AATAAA	-18	NA	46327763	46332358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_46327837_46330632_46330652_46330720_46330803_46331389
Isoform_20274_20	chr11	+	1267	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	4	-78	4	78	multi-exon	FALSE	canonical	3	177	junction_1	179.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTAGATTTATTCCA	NA	False	NA	16	True	AATAAA	-29	NA	46327782	46332432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46327837_46330632_46330803_46331389
Isoform_20275_63	chr11	+	1191	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	6	-4	-3	4	multi-exon	FALSE	canonical	3	177	junction_1	179.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTCATTCTTGGAAAAA	NA	False	NA	16	True	AATAAA	-18	NA	46327784	46332358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46327837_46330632_46330803_46331389
Isoform_202753_217	chrX	+	5702	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	18	729	-7	34	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAGCCTATTTTAATTT	NA	False	NA	14	True	AAAAAG	-20	NA	151016242	151056802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_202756_111	chrX	+	6437	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	18	-6	-7	6	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGCCTTCTTTGAC	NA	False	NA	26	True	NA	NA	NA	151016242	151057537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_202759_12	chrX	+	5566	27	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	9	38	combination_of_known_junctions	FALSE	canonical	3	33	junction_26	107.655900439355	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTATTTTAATTTTATT	NA	False	NA	18	True	AAAAAG	-24	NA	151016233	151056806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151055898_151056046
Isoform_202760_88	chrX	+	5711	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	227	-38	-7	34	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAGCCTATTTTAATTT	NA	False	NA	14	True	AAAAAG	-20	NA	151016242	151056802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
Isoform_202761_40	chrX	+	5778	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	226	-104	-8	100	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTGGA	NA	False	NA	14	True	AATAAA	-17	NA	151016241	151056868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
Isoform_202762_38	chrX	+	6436	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	227	-763	-7	-4	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCTCCTTTTGTGTCTGC	NA	False	NA	16	True	NA	NA	NA	151016242	151057527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
Isoform_202763_10	chrX	+	5562	27	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	11	27	combination_of_known_junctions	FALSE	canonical	3	33	junction_26	124.800053102705	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCAACTAAAGCCTATT	NA	False	NA	7	True	AAAAAG	-13	NA	151016235	151056795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704_151055898_151056046
Isoform_202766_31	chrX	+	5568	25	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-7	38	intron_retention	FALSE	canonical	3	39	junction_21	110.865502850175	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTATTTTAATTTTATT	NA	False	NA	18	True	AAAAAG	-24	NA	151016242	151056806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_20277_8	chr11	+	1289	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	-25	-71	2	71	multi-exon	FALSE	canonical	3	177	junction_1	179.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAAAATGTTTAGATT	NA	False	NA	9	True	AATAAA	-22	NA	46327753	46332425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46327837_46330632_46330803_46331389
Isoform_20278_5	chr11	+	2370	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	12	-1189	3	-5	multi-exon	FALSE	canonical	3	177	junction_1	179.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATTATCCAGGAATTTT	NA	False	NA	NA	False	NA	NA	NA	46327790	46333543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46327837_46330632_46330803_46331389
Isoform_20279_18	chr11	+	1025	2	FSM	ENSMUSG00000020397.16	ENSMUST00000152119.2	381	2	30	-674	3	5	multi-exon	FALSE	canonical	3	22	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCATTCTTGGAAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	46327781	46332359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46327837_46331389
Isoform_202793_22	chrX	+	1715	9	FSM	ENSMUSG00000025333.11	ENSMUST00000026383.4	1586	9	-119	-10	-54	10	multi-exon	FALSE	canonical	3	18	junction_8	3.91910385164772	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACATGGATTCTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	151564862	151591652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151565289_151568038_151568149_151569121_151569217_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236
Isoform_202796_8	chrX	+	2221	2	FSM	ENSMUSG00000067215.6	ENSMUST00000095755.4	2204	2	1	-18	1	18	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTGAAAAAGAAGAGAA	8833	False	NA	NA	False	NA	NA	NA	151789465	151792430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151789541_151790284
Isoform_202798_5	chrX	+	3265	4	FSM	ENSMUSG00000071665.11	ENSMUST00000096265.10	3210	4	-53	-2	-53	2	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTTGATGTTTCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	151901728	151915859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151901847_151902010_151902087_151909895_151909940_151912832
Isoform_202799_266	chrX	+	2236	11	FSM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	21	1	15	-1	multi-exon	FALSE	canonical	3	216	junction_4	30.0765689532566	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3197	False	NA	NA	False	AATAAA	-16	NA	151922997	151954938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
Isoform_202803_7	chrX	+	2457	11	FSM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	-200	1	-200	-1	multi-exon	FALSE	canonical	3	216	junction_4	30.0765689532566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	2976	False	NA	NA	False	AATAAA	-16	NA	151922776	151954938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
Isoform_202804_5	chrX	+	2205	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-14	18249	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	82.4209318073995	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAACAACAACTGAATGA	3162	False	NA	NA	False	NA	NA	NA	151922962	151973188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151972527
Isoform_202806_74	chrX	+	2179	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	77	junction_3	67.8576942333489	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3170	False	NA	NA	False	AATAAA	-16	NA	151922970	151954938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
Isoform_20281_15	chr11	+	1306	4	NNC	ENSMUSG00000020397.16	novel	2547	3	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	200.899643271626	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTCATTCTTGGAAAAA	NA	False	NA	16	True	AATAAA	-18	NA	46327782	46332358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_46328019_46330632_46330652_46330720_46330803_46331389
Isoform_202812_4	chrX	+	4273	8	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	64.3869044867647	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTGAGATTTTCAG	3973	False	NA	20	True	NA	NA	NA	152020449	152178794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_152020508_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202813_3	chrX	+	4397	8	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-25	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	62.9619256506077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTTTTTTTGAGATTT	3960	False	NA	16	True	NA	NA	NA	152020436	152178790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_152020508_152020946_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202814_3	chrX	+	4563	7	FSM	ENSMUSG00000041649.14	ENSMUST00000112574.9	4752	7	98	91	98	-91	multi-exon	FALSE	canonical	3	21	junction_2	59.2527542725981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATAGCTTCTTGGAGTTC	4365	False	NA	28	True	NA	NA	NA	152020841	152179037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202815_4	chrX	+	4449	7	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	81	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	55.3162624269653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTTTTTTGAGATTTT	4348	False	NA	17	True	NA	NA	NA	152020824	152178791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202816_4	chrX	+	4438	8	FSM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	-32	1	-32	-1	multi-exon	FALSE	canonical	2	12	junction_1	60.7816433083649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTTTTTGAGATTTTC	NA	False	NA	18	True	NA	NA	NA	152142576	152178792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_152142706_152142837_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202817_23	chrX	+	4278	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	50.56349144063	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTTTTTTTGAGATTT	NA	False	NA	16	True	NA	NA	NA	152142611	152178790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_152142706_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202818_7	chrX	+	4523	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-1	-97	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	50.56349144063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTTGTGATAGCTTCTTG	NA	False	NA	22	True	NA	NA	NA	152142607	152179031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_152142706_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_20282_10	chr11	+	1373	4	NNC	ENSMUSG00000020397.16	novel	2547	3	NA	NA	4	71	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	200.899643271626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAAAATGTTTAGATT	NA	False	NA	9	True	AATAAA	-22	NA	46327782	46332425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_46328019_46330632_46330652_46330720_46330803_46331389
Isoform_202821_4	chrX	+	4324	7	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	218	-3	218	3	3prime_fragment	FALSE	canonical	3	13	junction_1	51.9123192401273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGAGATTTTCAGGA	NA	False	NA	22	True	NA	NA	NA	152142826	152178796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202822_3	chrX	+	4575	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-32	4	intron_retention	FALSE	canonical	3	13	junction_1	51.9123192401273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGAGATTTTCAGGAA	NA	False	NA	23	True	NA	NA	NA	152142576	152178797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202823_78	chrX	+	4382	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	486	2	486	-2	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTTTTTTGAGATTTT	NA	False	NA	17	True	NA	NA	NA	152143094	152178791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202824_23	chrX	+	4623	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	486	-239	486	-96	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTGTGATAGCTTCTTGG	NA	False	NA	23	True	NA	NA	NA	152143094	152179032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202825_7	chrX	+	6477	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	482	-2089	482	1754	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTGGAAGCAAGATTAT	NA	False	NA	NA	False	AATAAA	-17	NA	152143090	152180882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_202828_9	chrX	+	1407	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	-22	-610	-5	610	multi-exon	FALSE	canonical	3	163	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATAAACTGTCTAAATTC	NA	False	NA	NA	False	AATAAA	-18	NA	152506600	152512794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_152506934_152508700_152508838_152511857
Isoform_202829_79	chrX	+	769	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	51	-32	14	32	multi-exon	FALSE	canonical	3	149	junction_3	8.37987005998436	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAGAGCTATACGATTA	NA	False	NA	41	True	AATAAA	-16	NA	152506636	152524292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
Isoform_20283_7	chr11	+	2536	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	8	3	4	-3	multi-exon	FALSE	canonical	3	262	junction_1	137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTATCCAGGAATTTTGT	NA	False	NA	NA	False	NA	NA	NA	46327808	46333545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46328019_46330632_46330803_46331389
Isoform_202830_34	chrX	+	696	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	26	624	9	32	multi-exon	FALSE	canonical	3	65	junction_2	49	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAGAGCTATACGATTA	NA	False	NA	41	True	AATAAA	-16	NA	152506631	152524292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_152506934_152508700_152508838_152524035
Isoform_202831_4	chrX	+	1249	3	FSM	ENSMUSG00000046550.9	ENSMUST00000123264.2	536	3	6	-719	6	-1	multi-exon	FALSE	canonical	3	17	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGTCATCTAAAAAATTG	NA	False	NA	NA	False	AATAAA	-18	NA	152615242	152617238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_152615326_152615430_152615545_152616186
Isoform_202832_5	chrX	+	1348	2	FSM	ENSMUSG00000046550.9	ENSMUST00000049999.9	1309	2	-41	2	11	-2	multi-exon	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAGTCATCTAAAAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	152615247	152617237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_152615545_152616186
Isoform_20284_149	chr11	+	1348	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	8	1191	4	3	multi-exon	FALSE	canonical	3	262	junction_1	137	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTCATTCTTGGAAAA	NA	False	NA	15	True	AATAAA	-17	NA	46327808	46332357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46328019_46330632_46330803_46331389
Isoform_202841_330	chrX	+	1553	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	53	146	-9	-138	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCACTTTGCTTTG	NA	False	NA	17	True	AATAAA	-17	NA	154045491	154080504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
Isoform_202843_272	chrX	+	1696	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	53	3	-9	-3	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGTGAGTCTCCCATGT	NA	False	NA	23	True	AATAAA	-17	NA	154045491	154080647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
Isoform_202844_17	chrX	+	1605	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	1	146	1	-138	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCACTTTGCTTTG	NA	False	NA	17	True	AATAAA	-17	NA	154045439	154080504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
Isoform_20285_50	chr11	+	1423	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	8	1116	4	78	multi-exon	FALSE	canonical	3	262	junction_1	137	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTAGATTTATTCCA	NA	False	NA	16	True	AATAAA	-29	NA	46327808	46332432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46328019_46330632_46330803_46331389
Isoform_202851_3	chrX	+	3197	24	NIC	ENSMUSG00000031309.16	novel	7244	22	NA	NA	-27	299	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	16.3806331311381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGATTAACAGTATTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	158038826	158147035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_158039185_158061105_158061200_158062162_158062200_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
Isoform_202852_21	chrX	+	2780	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	-2	4466	-2	38	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCATTATTTTTATAGG	NA	False	NA	12	True	AATAAA	-15	NA	158038851	158146774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
Isoform_202853_6	chrX	+	3067	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	-27	4204	-27	300	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGATTAACAGTATTGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	158038826	158147036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
Isoform_20286_16	chr11	+	1178	2	FSM	ENSMUSG00000020397.16	ENSMUST00000128940.2	702	2	4	-480	4	3	multi-exon	FALSE	canonical	3	24	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTCATTCTTGGAAAA	NA	False	NA	15	True	AATAAA	-17	NA	46327808	46332357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46328019_46331389
Isoform_202860_202	chrX	+	3209	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	36	1927	36	-1927	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATAATGGTTTTTTGTT	5383	False	NA	NA	False	AATAAA	-14	NA	158155209	158170997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
Isoform_202861_1033	chrX	+	911	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	35	4226	35	-4226	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGACTAAGCCCTGCC	5382	False	NA	12	True	AATAAA	-24	NA	158155208	158168698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
Isoform_20287_6	chr11	+	1235	3	NNC	ENSMUSG00000020397.16	novel	2547	3	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAATTGTCATTCTTGG	NA	False	NA	11	True	AATAAA	-13	NA	46327829	46332353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_46328019_46330720_46330803_46331389
Isoform_202877_34	chrX	+	4826	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	36	310	36	-310	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATGTATATAGTTGTTTG	5383	False	NA	NA	False	NA	NA	NA	158155209	158172614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
Isoform_20289_8173	chr11	+	1099	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	0	348	0	-2	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	8173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCTTCTATATGTGAG	NA	False	NA	21	True	AATAAA	-13	NA	48691186	48696913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
Isoform_202902_83	chrX	+	3605	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-39	-5	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGCTGTGCCATTGAC	NA	False	NA	2	True	AATAAA	-13	NA	158197528	158281748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
Isoform_202907_17	chrX	+	3706	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-136	-1	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTGCCATTGACCTTG	NA	False	NA	6	True	AATAAA	-17	NA	158197431	158281752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
Isoform_202919_148	chrX	+	3961	8	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	-9	30429	-9	10076	5prime_fragment	FALSE	canonical	3	421	junction_5	81.1237402027902	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCAAGTTTTTGTG	NA	False	NA	13	True	NA	NA	NA	158315705	158344961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
Isoform_202928_215	chrX	+	3338	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	28	0	-23	0	multi-exon	FALSE	canonical	3	339	junction_9	109.675027103931	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315691	158376077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
Isoform_202930_98	chrX	+	3312	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	15	-14	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158315729	158376063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
Isoform_202933_21	chrX	+	4166	12	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	8	-15	combination_of_known_junctions	TRUE	canonical	3	111	junction_9	153.898914983368	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTACCTGGCAGTTGG	NA	False	NA	8	True	AATAAA	-21	NA	158315671	158376062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
Isoform_202936_22	chrX	+	4705	11	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	22	-15	intron_retention	FALSE	canonical	3	374	junction_10	98.8130052169248	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTACCTGGCAGTTGG	NA	False	NA	8	True	AATAAA	-21	NA	158315685	158376062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158375066
Isoform_202938_18	chrX	+	3258	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	160.572169094159	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158315683	158376076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
Isoform_202939_33	chrX	+	3223	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	160.572169094159	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	16	True	AATAAA	-29	NA	158315712	158376070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
Isoform_202941_25	chrX	+	3290	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	196.729703880448	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315678	158376077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
Isoform_202949_46	chrX	+	3334	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_5	151.634892079191	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGGTGAGAGCATTCT	NA	False	NA	20	True	AATAAA	-33	NA	158315689	158376074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
Isoform_202951_40	chrX	+	3320	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	4	-14	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_5	189.780794602615	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158315718	158376063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
Isoform_202958_14	chrX	+	3239	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	188.637261772232	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315700	158376077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
Isoform_202962_31	chrX	+	3447	18	FSM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	-28	3898	-28	4	multi-exon	FALSE	canonical	3	14	junction_4	4.015540744912	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGGGGAATTGGATTAT	NA	False	NA	20	True	AATAAA	-25	NA	158410239	158757167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
Isoform_202964_4	chrX	+	3312	17	NIC	ENSMUSG00000040990.18	novel	7317	18	NA	NA	-20	6	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	5.29150262212918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGAATTGGATTATTT	NA	False	NA	22	True	AATAAA	-27	NA	158410247	158757169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158749209_158749479_158754857_158754922_158756120
Isoform_202965_52	chrX	+	4569	29	FSM	ENSMUSG00000031303.9	ENSMUST00000033665.9	4348	29	-226	5	-226	-5	multi-exon	FALSE	canonical	3	16	junction_1	11.3624762858691	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACTGAAGTTCCCTTAT	NA	False	NA	8	True	ATTAAA	-16	NA	158771202	158906342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
Isoform_202969_6	chrX	+	3947	34	FSM	ENSMUSG00000031295.14	ENSMUST00000112377.8	3947	34	-4	4	-4	-4	multi-exon	FALSE	canonical	3	9	junction_1	19.1295904422098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285157	159374133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_159285289_159285742_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
Isoform_202970_22	chrX	+	3931	34	NIC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	18.7602436052563	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCATTTGTAGACTCA	NA	False	NA	6	True	CATAAA	-17	NA	159285170	159374136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_159285289_159285748_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
Isoform_202971_22	chrX	+	3977	34	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	19.0057262648391	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCATTTGTAGACTCA	NA	False	NA	6	True	CATAAA	-17	NA	159285157	159374136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_159285289_159285715_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
Isoform_202974_59	chrX	+	4125	33	FSM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	7	1	7	-1	multi-exon	FALSE	canonical	3	71	junction_12	13.3855098894289	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCATTTGTAGACTCA	NA	False	NA	6	True	CATAAA	-17	NA	159285436	159374136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
Isoform_202978_3	chrX	+	1894	3	ISM	ENSMUSG00000000037.18	ENSMUST00000112345.8	4847	26	80636	6	-2849	-6	3prime_fragment	TRUE	canonical	3	285	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	160026403	160041203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_160026545_160029252_160029364_160039561
Isoform_202983_4255	chrX	+	1950	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	-10	304	-10	32	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	4255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTTTGTTTTGTTC	NA	False	NA	0	True	AATAAA	-7	NA	161543387	161561784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
Isoform_202988_99	chrX	+	2261	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	-16	-1	-16	1	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATATCTGCATCATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	161543381	161562089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
Isoform_203_145	ERCC-00165	+	855	1	FSM	ERCC-00165A	DQ668363	856	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00165_+_0_900
Isoform_2030_4	chr10	-	5958	3	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2113	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	63	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATGCCCAGGAGTCTG	NA	False	NA	-7	True	AATAAA	-17	NA	42150579	42057841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_42062292_42072461_42073898_42150507
Isoform_203019_169	chrX	+	2199	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-26	1180	1	9	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAGAAAGTGGTTTTGTG	NA	False	NA	20	True	ATTAAA	-26	NA	161684601	161814324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
Isoform_203020_4	chrX	+	3378	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-26	1	1	-1	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGGCAGACTTGTACT	NA	False	NA	NA	False	AATAAA	-21	NA	161684601	161815503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
Isoform_203022_48	chrX	+	2356	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	-264	1007	1	-1	multi-exon	TRUE	canonical	2	41	junction_1	44.8724185955837	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCGGGCCCGGCAGAAAG	NA	False	NA	10	True	ATTAAA	-16	NA	161684601	161814314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
Isoform_203029_83	chrX	+	3366	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	-157	-10	-29	10	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGACTTCTTTCTTC	NA	False	NA	8	True	AATAAA	-23	NA	162691983	162712552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
Isoform_203030_153	chrX	+	3206	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	-7	0	-4	0	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	-2	True	AATAAA	-13	NA	162692133	162712542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
Isoform_203033_6	chrX	+	1779	5	FSM	ENSMUSG00000031367.16	ENSMUST00000033734.14	1785	5	10	-4	7	4	multi-exon	FALSE	canonical	3	11	junction_4	61.936963923008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTGTGCTTTTCTCTT	NA	False	NA	6	True	AATAAA	-13	NA	162692147	162716359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162715128
Isoform_203034_3	chrX	+	1942	5	FSM	ENSMUSG00000031367.16	ENSMUST00000033734.14	1785	5	-153	-4	-28	4	multi-exon	FALSE	canonical	3	11	junction_4	61.936963923008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTGTGCTTTTCTCTT	NA	False	NA	6	True	AATAAA	-13	NA	162691984	162716359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162715128
Isoform_203037_4	chrX	+	2377	2	FSM	ENSMUSG00000031379.14	ENSMUST00000127685.2	439	2	53	-1991	-9	1991	multi-exon	FALSE	canonical	3	305	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATGAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	163052559	163056861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163052674_163054598
Isoform_203039_121	chrX	+	1256	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	115	228	-1	-228	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGTTTTTTTGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	163052541	163155779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_203040_19	chrX	+	1319	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	174	106	32	-106	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTCCTGATACATG	NA	False	NA	NA	False	AATAAA	-21	NA	163052600	163155901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_203041_19	chrX	+	1417	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	77	105	-3	-105	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCCTGATACATGC	NA	False	NA	NA	False	AATAAA	-22	NA	163052503	163155902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_203042_9	chrX	+	1486	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	115	-2	-1	2	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTTTTTTATATGGG	NA	False	NA	NA	False	TATAAA	-17	NA	163052541	163156009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_203043_14	chrX	+	1464	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	137	-2	-5	2	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTTTTTTATATGGG	NA	False	NA	NA	False	TATAAA	-17	NA	163052563	163156009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_203044_12	chrX	+	1207	9	NIC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	2	-229	combination_of_known_splicesites	FALSE	canonical	3	32	junction_6	81.4048524352203	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGTTTTTTTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	163052544	163155778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163141143_163141227_163152041_163152109_163155448
Isoform_203047_5	chrX	+	1068	9	NIC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	32	-228	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	80.2507788124203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGTTTTTTTGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	163052600	163155779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_163052674_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_203048_11	chrX	+	2862	6	FSM	ENSMUSG00000031381.17	ENSMUST00000208261.2	831	6	13	-2044	13	0	multi-exon	FALSE	canonical	3	10	junction_2	93.3967879533338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202815	163216912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163202837_163205579_163205661_163210927_163211061_163211535_163211669_163211806_163212014_163214625
Isoform_203049_60	chrX	+	3183	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	33	-4	13	-1	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163202815	163216911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
Isoform_203050_13	chrX	+	3209	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	7	-4	-4	-1	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163202789	163216911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
Isoform_203053_266	chrX	+	3560	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	33	1	13	-1	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163202815	163216911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
Isoform_203057_16	chrX	+	3594	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202782	163216912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
Isoform_203059_9	chrX	+	3796	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	-202	0	-202	0	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202580	163216912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
Isoform_203062_6	chrX	+	3870	6	FSM	ENSMUSG00000031381.17	ENSMUST00000151911.9	3903	6	33	0	13	0	multi-exon	FALSE	canonical	2	5	junction_2	95.333939392013	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202815	163216912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163202837_163205579_163206669_163210927_163211061_163211535_163211669_163211806_163212014_163214625
Isoform_203075_3	chrX	+	1200	6	ISM	ENSMUSG00000031382.15	ENSMUST00000033755.6	1369	7	7681	-3	7681	3	3prime_fragment	FALSE	canonical	1	1	junction_1	1.62480768092719	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTTTTAATTTAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	163228734	163242163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_163228805_163233450_163233559_163235894_163236046_163237383_163237519_163238792_163238985_163241619
Isoform_203076_5	chrX	+	2500	9	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-17	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	35.8468966578698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTCTTGTTTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	163763690	163780264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778419_163778882_163779118_163779765
Isoform_203077_5	chrX	+	2402	9	FSM	ENSMUSG00000047757.18	ENSMUST00000057150.8	2395	9	-9	2	-9	1	multi-exon	FALSE	canonical	0	0	junction_7	35.8468966578698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTTTTCTTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	163763698	163780266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778419_163778974_163779118_163779765
Isoform_203078_236	chrX	+	2857	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	97	-1	-23	1	multi-exon	FALSE	canonical	3	98	junction_5	7.72981241687015	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTTTTCTTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	163763684	163780266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
Isoform_203081_6	chrX	+	3537	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	94	-678	-26	675	multi-exon	TRUE	canonical	3	98	junction_5	7.72981241687015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	163763681	163780943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
Isoform_203082_7	chrX	+	2971	8	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-23	0	intron_retention	FALSE	canonical	3	98	junction_5	7.51596939312337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	163763684	163780265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163779118_163779765
Isoform_203083_3	chrX	+	1319	5	FSM	ENSMUSG00000040621.15	ENSMUST00000087169.11	1928	5	-78	687	-37	3	multi-exon	FALSE	canonical	1	1	junction_1	20.8371663140649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCCTACATTTTTATTA	NA	False	NA	NA	False	CATAAA	-21	NA	164953412	164972819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_164953547_164961529_164961639_164961787_164961827_164963348_164963806_164972239
Isoform_203084_10	chrX	+	1887	4	FSM	ENSMUSG00000040621.15	ENSMUST00000056410.11	1862	4	-29	4	-29	-2	multi-exon	FALSE	canonical	3	11	junction_1	17.1529071070248	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTATGGACTGGATTTGAT	NA	False	NA	NA	False	NA	NA	NA	164953420	164973504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_164953547_164961787_164961827_164963348_164963806_164972239
Isoform_203087_182	chrX	+	1404	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	6	-1	at_least_one_novel_splicesite	TRUE	non_canonical	1	93	junction_3	62.5634677747326	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGGTCATTTGATGC	NA	False	NA	8	True	AATAAA	-13	NA	165223777	165236135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_165223836_165229786_165229899_165232783_165232928_165233623_165233711_165235132
Isoform_203110_381	chrX	+	1675	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	-1	at_least_one_novel_splicesite	FALSE	canonical	3	454	junction_1	848.656143558744	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74147761	74153382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_74147807_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
Isoform_203113_4	chrX	+	1366	2	Intergenic	novelGene_12331	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCGGCGTCGGCTCCTCC	3134	False	NA	3	True	AATAAA	-17	NA	169102293	169105547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_169102617_169104504
Isoform_203115_37	chrX	+	2773	5	Intergenic	novelGene_12330	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	16.3764312351623	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGGCGTCGGCTCCTC	215	False	NA	2	True	AATAAA	-16	NA	169098025	169105546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_169098429_169099929_169100868_169101639_169101789_169102375_169102617_169104504
Isoform_203116_16	chrX	+	2922	5	Intergenic	novelGene_12328	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	16.3764312351623	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGGCGTCGGCTCCTC	66	False	NA	2	True	AATAAA	-16	NA	169097876	169105546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_169098429_169099929_169100868_169101639_169101789_169102375_169102617_169104504
Isoform_203120_5	chrX	+	3037	6	Intergenic	novelGene_12329	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_2	32.6030673403593	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCGGCGTCGGCTCCTCC	71	False	NA	3	True	AATAAA	-17	NA	169097881	169105547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_169098429_169099553_169099673_169099929_169100868_169101639_169101789_169102375_169102617_169104504
Isoform_203122_4	chrX	+	3165	6	Intergenic	novelGene_12327	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_2	32.6030673403593	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGGCGTCGGCTCCTC	6095	False	NA	2	True	AATAAA	-16	NA	169097752	169105546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_169098429_169099553_169099673_169099929_169100868_169101639_169101789_169102375_169102617_169104504
Isoform_203125_8	chrX	+	2488	3	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-6	608	intron_retention	FALSE	canonical	3	138	junction_1	14	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828346	20853584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_20828835_20833967_20834048_20851664
Isoform_203126_12	chrX	+	1978	4	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-9	608	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	34.9221356098901	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828343	20853584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852217
Isoform_203127_20	chrX	+	1053	5	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-6	608	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	30.3016088681773	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828346	20853584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852217_20852400_20853321
Isoform_203128_12	chrX	+	1033	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	3	608	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_3	26.8048503073604	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828355	20853584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852228_20852400_20853321
Isoform_203129_3	chrX	+	949	2	Intergenic	novelGene_12099	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATGAAAAATAAATTGAAA	9258	False	NA	NA	False	NA	NA	NA	100739441	100744033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100739530_100743172
Isoform_20313_3	chr11	+	2788	7	FSM	ENSMUSG00000040350.17	ENSMUST00000046903.6	2161	7	6	-633	0	1	multi-exon	TRUE	canonical	1	1	junction_1	1.5723301886761	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGGGGTGTCTGGACT	NA	False	NA	NA	False	AATACA	-14	NA	48728297	48742015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_48728873_48729663_48729760_48736262_48736494_48738341_48738365_48738851_48738968_48739399_48739436_48740304
Isoform_203130_62	chrX	+	4804	13	NNC	ENSMUSG00000037315.16	novel	2472	10	NA	NA	-358	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	41.5759011394288	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTCAGTGTGATGAT	NA	False	NA	8	True	ATTAAA	-16	NA	20291568	20386177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_20291651_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
Isoform_203131_6	chrX	+	3474	5	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	17.8798070459387	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGTAGATGTCTAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	72160663	72172868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_203133_11	chrX	+	2798	5	NNC	ENSMUSG00000067771.10	novel	2773	4	NA	NA	686	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	17.8798070459387	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTAGATGTCTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	72161338	72172867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_203134_16	chrX	-	1473	8	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_7	44.1518714790442	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCCAGGTCTTCACT	NA	False	NA	NA	False	AATAAA	-14	NA	101898244	101891242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898002
Isoform_203135_19	chrX	+	1392	8	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	62	5	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	44.698993277254	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCAGGTCTTCACTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	101846630	101853553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_101846789_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
Isoform_203136_45	chrX	+	847	2	Genic_Genomic	ENSMUSG00000072249.4	novel	847	1	NA	NA	-19449	-8	multi-exon	TRUE	canonical	3	217	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGAAGTATCAAATTGA	NA	False	NA	22	True	AATAAA	-22	NA	8909804	8930092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_8909865_8929305
Isoform_203137_4	chrX	+	2886	24	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-111	297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.4676460017611	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTGGATTAACAGTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	158038666	158147033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_158038716_158061105_158061200_158062162_158062200_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
Isoform_203139_14	chrX	+	2762	22	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-118	297	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	12.7339779727836	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTGGATTAACAGTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	158038659	158147033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_158038716_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
Isoform_20314_3	chr11	+	4143	6	NNC	ENSMUSG00000046311.14	novel	366	5	NA	NA	-7	-24	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	47.6554299109766	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1352	False	NA	7	True	AATAAA	-16	NA	49094304	49109612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_49094366_49103521_49103604_49104416_49104470_49105049_49105146_49105352_49105482_49105890
Isoform_203149_4	chrX	+	10519	23	Fusion	ENSMUSG00000041245.14_ENSMUSG00000086286.2	novel	5253	22	NA	NA	-192	39	multi-exon	TRUE	canonical	3	19	junction_6	4.9057227502662	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCAACTGGCTTAAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	149952503	150103187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
Isoform_20315_5	chr11	+	3981	5	FSM	ENSMUSG00000046311.14	ENSMUST00000109197.8	4029	5	15	33	7	-26	multi-exon	FALSE	canonical	1	1	junction_3	50.6310181608073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTGTGACTTGTTTT	1387	False	NA	5	True	AATAAA	-14	NA	49094339	49109610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105381_49105482_49105890
Isoform_203153_11	chrX	+	4306	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	63.8435587980495	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	3934	False	NA	19	True	NA	NA	NA	152020410	152178793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_152020503_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_203156_14	chrX	+	1974	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	17.7330827049958	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371242	149426874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_149371410_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
Isoform_20316_64	chr11	+	3907	4	FSM	ENSMUSG00000046311.14	ENSMUST00000109198.8	3872	4	195	-230	2	-26	multi-exon	FALSE	canonical	3	79	junction_1	17.4547032821147	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTGTGACTTGTTTT	1361	False	NA	5	True	AATAAA	-14	NA	49094313	49109610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105890
Isoform_203161_8	chrX	+	4937	2	Intergenic	novelGene_12229	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGTTTTAGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	148930493	148935554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_148930725_148930848
Isoform_203162_5	chrX	+	1039	3	Intergenic	novelGene_12232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGTTTTAGTCTCCATT	NA	False	NA	NA	False	NA	NA	NA	148930495	148935555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_148930725_148930848_148930931_148934827
Isoform_203167_7	chrX	+	759	4	NNC	ENSMUSG00000073131.13	novel	4652	4	NA	NA	-3144	71	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	181.726901329073	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGTCTTAAAGAGTCA	NA	False	NA	24	True	AATAAA	-36	NA	70856385	70864661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_70856555_70860076_70860306_70863673_70863784_70864410
Isoform_203168_4	chrX	+	2178	4	NNC	ENSMUSG00000073131.13	novel	4652	4	NA	NA	-3191	1443	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	181.726901329073	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGCTATTATTGATT	NA	False	NA	NA	False	AATAAA	-14	NA	70856338	70866033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_70856555_70860076_70860306_70863673_70863784_70864410
Isoform_203170_5	chrX	+	4175	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	80	5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	65.2814419775381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAGATTTTCAGGAAA	4065	False	NA	24	True	NA	NA	NA	152020541	152178798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_152020571_152020946_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_203171_3	chrX	+	7319	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	57	2791	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	65.2814419775381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGGTTTTGTGTTTA	4042	False	NA	16	True	AATAAA	-17	NA	152020518	152181919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_152020571_152020946_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_203173_7	chrX	+	2080	2	Genic_Genomic	ENSMUSG00000105993.2	novel	1834	1	NA	NA	-17	587	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGCTCTTTCCTTTGT	NA	False	NA	NA	False	AATAGA	-11	NA	41578550	41580988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_41580411_41580768
Isoform_203174_5	chrX	+	2990	2	Genic_Genomic	ENSMUSG00000105993.2	novel	1834	1	NA	NA	-16	1498	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGCCTTTTGTGTGGT	NA	False	NA	3	True	AATAAA	-16	NA	41578551	41581899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_41580411_41580768
Isoform_203175_5	chrX	+	1553	11	NNC	ENSMUSG00000039382.13	novel	955	8	NA	NA	123	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	63.4240490665804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAAGGGTGGGGCGTGCT	4839	False	NA	16	True	AATAAA	-29	NA	7589288	7594439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_7589401_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_203176_9	chrX	+	557	2	Intergenic	novelGene_12043	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTCTGGTTGTGG	NA	False	NA	13	True	NA	NA	NA	88052079	88080610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_88052327_88080300
Isoform_203177_7	chrX	+	4186	7	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	-53906	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	65.0676997868801	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTTTTTGAGATTTTC	NA	False	NA	18	True	NA	NA	NA	152088702	152178792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_152088818_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_203178_3	chrX	+	4114	6	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	-53906	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.2130704996898	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	NA	False	NA	19	True	NA	NA	NA	152088702	152178793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_152088818_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_203179_7	chrX	+	963	2	Genic_Genomic	ENSMUSG00000051851.6	novel	401	1	NA	NA	-128	695	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGGAGTCTTACT	NA	False	NA	NA	False	AATAAA	-17	NA	52609870	52611094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_52610392_52610652
Isoform_203181_8	chrX	+	2247	3	Genic_Genomic	ENSMUSG00000083576.2	novel	1100	1	NA	NA	-57641	366	multi-exon	FALSE	canonical	2	4	junction_1	13	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGTGGCTTACTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	61241012	61300119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_61241264_61249243_61249365_61298244
Isoform_203183_10	chrX	+	177	2	Antisense	novelGene_ENSMUSG00000025264.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	149875436	149910413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_+_149875487_149910286
Isoform_203184_7	chrX	+	4625	18	NNC	ENSMUSG00000045103.20	novel	596	4	NA	NA	229	3	at_least_one_novel_splicesite	TRUE	non_canonical	2	5	junction_1	92.1686809276591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATACCTATTGGTTGG	NA	False	NA	13	True	AATAAA	-19	NA	84092247	84248648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_84092531_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076_84246547_84246566
Isoform_203186_7	chrX	+	5421	3	Antisense	novelGene_ENSMUSG00000083114.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTAGTGGCCTCTGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	93024167	93029940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_+_93024327_93024654_93026169_93026192
Isoform_203188_5	chrX	+	1511	2	NNC	ENSMUSG00000073207.2	novel	1536	2	NA	NA	1870	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATGCCTGTGATTCT	NA	False	NA	NA	False	AATAAA	-24	NA	51881946	51888346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_51882047_51886935
Isoform_203192_6	chrX	+	789	4	NNC	ENSMUSG00000006200.4	novel	1010	4	NA	NA	301	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	87.0899917709645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGGCTCCATTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	36916087	36918732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_36916139_36916242_36916703_36917291_36917338_36918500
Isoform_203193_5	chrX	+	2046	7	NNC	ENSMUSG00000094885.8	novel	2028	7	NA	NA	-4959	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	5.37742193496723	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	147866351	147921152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_147866458_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
Isoform_203196_4	chrX	+	1658	5	NNC	ENSMUSG00000071763.10	novel	703	5	NA	NA	-22121	411	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.11803398874989	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCACGGCCATGTCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	52666482	52693297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_52667179_52690286_52690472_52690869_52691012_52691929_52692052_52692784
Isoform_203198_3	chrX	+	4252	7	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	352	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.3454129060703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGAGATTTTCAGGA	NA	False	NA	22	True	NA	NA	NA	152142960	152178796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_152143023_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
Isoform_203199_3	chrX	+	4946	2	Intergenic	novelGene_12230	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCGTGTTTTAGTCTCCA	NA	False	NA	NA	False	NA	NA	NA	148930494	148935553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_148930736_148930848
Isoform_2032_9	chr10	-	2530	3	FSM	ENSMUSG00000048756.12	ENSMUST00000175881.8	2535	3	1	4	1	-4	multi-exon	FALSE	canonical	3	109	junction_2	12.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTCACTCTTTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	42152691	42072267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_42073898_42150811_42151542_42152521
Isoform_203200_4	chrX	+	2034	7	NNC	ENSMUSG00000094378.8	novel	2029	7	NA	NA	-4934	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	5.27309733985213	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCTTTTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	148562534	148609687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_148562635_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
Isoform_203201_3	chrX	+	1337	11	NNC	ENSMUSG00000039382.13	novel	955	8	NA	NA	-100	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	65.4110082478477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTTTGTGACTGGAG	5234	False	NA	14	True	AATAAA	-16	NA	7589683	7594245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_7589774_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_203203_3	chrX	+	2486	12	NNC	ENSMUSG00000036769.15	novel	2723	2	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.0571129429147	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23642936	23672229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_23643055_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
Isoform_203204_3	chrX	+	1202	2	NNC	ENSMUSG00000049536.6	novel	2803	2	NA	NA	0	-1605	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTTTCTTCTGAATC	NA	False	NA	NA	False	AATAAA	-25	NA	135608730	135610622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_135608842_135609531
Isoform_203205_3	chrX	+	3523	5	NNC	ENSMUSG00000094371.2	novel	1386	3	NA	NA	-7964	1894	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	4.82182538049648	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACATTATCTGTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	134363239	134376173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrX_+_134363383_134364832_134364923_134371193_134371494_134371937_134372520_134373765
Isoform_20321_22	chr11	+	3106	4	FSM	ENSMUSG00000020346.17	ENSMUST00000167400.8	3151	4	45	0	-10	0	multi-exon	TRUE	canonical	2	7	junction_1	35.4432253360529	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49135062	49153849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49135167_49136019_49136445_49142376_49142502_49151397
Isoform_203210_4	chrX_GL456233v2_random	-	1690	1	Intergenic	novelGene_12332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTTTCTTCTTTAAT	NA	False	NA	-5	True	AATAAA	-12	NA	107397	105707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_GL456233v2_random_-_105700_107400
Isoform_203212_55	chrX_GL456233v2_random	-	1427	8	Intergenic	novelGene_12334	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATAGTTTAATACCTTC	NA	False	NA	-4	True	AATAAA	-26	NA	134107	106808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
Isoform_203213_19	chrX_GL456233v2_random	-	1579	8	Intergenic	novelGene_12333	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGGGGAGGCAAATACC	NA	False	NA	NA	False	AATAAA	-13	NA	134123	106672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
Isoform_203218_33	chrX_GL456233v2_random	+	2269	8	Intergenic	novelGene_12335	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_5	6.38557046817915	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGAGGGTTAAATTT	NA	False	NA	NA	False	NA	NA	NA	251309	468929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_460904_461142_467193_467333_467938
Isoform_203219_191	chrX	+	204	1	Intergenic	novelGene_11960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53255635	53255839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_53255600_53255800
Isoform_20322_9	chr11	+	2969	3	FSM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	1	6	1	-1	multi-exon	FALSE	canonical	2	7	junction_1	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATAAGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	49135073	49153848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49135167_49136019_49136445_49151397
Isoform_203222_57	chrX	-	176	1	Intergenic	novelGene_11828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGCATGGGAAA	NA	False	NA	NA	False	NA	NA	NA	7878259	7878083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_7878100_7878300
Isoform_203223_4	chrX	+	176	1	Intergenic	novelGene_11963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATAGCTGGAGAT	NA	False	NA	NA	False	NA	NA	NA	55386470	55386646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_55386500_55386600
Isoform_203226_13	chrX	-	178	1	Intergenic	novelGene_11964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGAAAAGAATTTAAAG	NA	False	NA	NA	False	NA	NA	NA	55522450	55522272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_55522300_55522400
Isoform_203231_25	chrX	-	175	1	Intergenic	novelGene_11965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTGAGACGCAGAGATG	NA	False	NA	NA	False	NA	NA	NA	55646065	55645890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_55645900_55646100
Isoform_203232_3	chrX	+	184	1	Intergenic	novelGene_11829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGACAAAACAAATGTGCA	4012	False	NA	NA	False	NA	NA	NA	7888342	7888526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_7888300_7888500
Isoform_203233_7	chrX	+	176	1	Intergenic	novelGene_11966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGATATCTATA	NA	False	NA	NA	False	NA	NA	NA	55689195	55689371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_55689200_55689400
Isoform_203235_8	chrX	-	237	1	Intergenic	novelGene_11967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGTGAGCCCTTCAGG	NA	False	NA	NA	False	NA	NA	NA	55785360	55785123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_55785100_55785400
Isoform_203238_4	chrX	+	178	1	Intergenic	novelGene_11968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	55882495	55882673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_55882500_55882700
Isoform_20324_5	chr11	+	3227	4	NIC	ENSMUSG00000020346.17	novel	633	3	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.8623236946117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49135370	49153854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_49135591_49136019_49136445_49142376_49142502_49151397
Isoform_203246_26	chrX	+	177	1	Intergenic	novelGene_11970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGGAAGTTGGAAAG	3042	False	NA	NA	False	NA	NA	NA	56377861	56378038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_56377900_56378000
Isoform_203247_43	chrX	+	180	1	Intergenic	novelGene_11971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	56393453	56393633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_56393500_56393600
Isoform_203248_17	chrX	+	172	1	Intergenic	novelGene_11972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGTGTCATTCTG	NA	False	NA	NA	False	NA	NA	NA	56424912	56425084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_56424900_56425100
Isoform_20325_98	chr11	+	2714	3	FSM	ENSMUSG00000020346.17	ENSMUST00000156607.8	633	3	251	-2332	251	1	multi-exon	FALSE	canonical	3	30	junction_1	30.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	49136308	49153850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49136445_49142376_49142502_49151397
Isoform_203250_22	chrX	+	158	1	Intergenic	novelGene_11973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAACA	2516	False	NA	NA	False	NA	NA	NA	56795260	56795418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_56795300_56795400
Isoform_203253_3	chrX	+	169	1	Intergenic	novelGene_11974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGTATGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	56928570	56928739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_56928600_56928700
Isoform_203254_20	chrX	+	177	1	Intergenic	novelGene_11975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATTGTAT	NA	False	NA	NA	False	NA	NA	NA	56990660	56990837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_56990700_56990800
Isoform_203255_40	chr5	+	181	1	Intergenic	novelGene_8705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106012712	106012893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_106012700_106012900
Isoform_203256_18	chrX	+	172	1	Intergenic	novelGene_11977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAACAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	57022085	57022257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_57022100_57022300
Isoform_203259_7	chrX	-	188	1	Intergenic	novelGene_11978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	57104497	57104309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_57104300_57104500
Isoform_203260_9	chrX	-	1606	2	Antisense	novelGene_ENSMUSG00000087193.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8741	False	NA	NA	False	NA	NA	NA	7919775	7918149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_-_7919726_7919745
Isoform_203261_15	chrX	-	165	1	Intergenic	novelGene_11979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCTCTTGCATAATT	NA	False	NA	NA	False	NA	NA	NA	57113113	57112948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_57112900_57113100
Isoform_203262_7	chrX	+	176	1	Intergenic	novelGene_11980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATAATAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	57125885	57126061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_57125900_57126100
Isoform_203264_4	chrX	+	184	1	Intergenic	novelGene_11981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAATATTTTG	NA	False	NA	NA	False	NA	NA	NA	58167600	58167784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_58167600_58167800
Isoform_203265_10	chrX	-	172	1	Intergenic	novelGene_11982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATAAACTGGATT	NA	False	NA	NA	False	NA	NA	NA	59040870	59040698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_59040700_59040900
Isoform_203270_3	chrX	-	163	1	Intergenic	novelGene_11983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCTTTTTTAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	59239993	59239830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_59239800_59240000
Isoform_203274_14	chrX	-	177	1	Intergenic	novelGene_11984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	59283105	59282928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_59282900_59283100
Isoform_203275_27	chrX	+	172	1	Intergenic	novelGene_11985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	59301309	59301481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_59301300_59301500
Isoform_203276_4	chrX	+	177	1	Intergenic	novelGene_11986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGAGAGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	59312679	59312856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_59312700_59312900
Isoform_203278_3	chrX	+	1244	1	FSM	ENSMUSG00000082226.5	ENSMUST00000117865.3	1210	1	-39	5	-39	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTGACCTTATTTTA	2286	False	NA	NA	False	NA	NA	NA	59591574	59592818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_59591600_59592800
Isoform_203279_5	chrX	-	177	1	Intergenic	novelGene_11987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCAGCTCAAAATTA	NA	False	NA	NA	False	NA	NA	NA	59796562	59796385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_59796400_59796600
Isoform_20328_79	chr11	+	2588	2	ISM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	1237	4	252	1	3prime_fragment	FALSE	canonical	3	29	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	49136309	49153850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_49136445_49151397
Isoform_203280_15	chrX	-	2074	1	FSM	ENSMUSG00000045179.10	ENSMUST00000135107.4	2065	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAGTCCTGATAATTT	NA	False	NA	0	True	AATAAA	-15	NA	59937045	59934971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_59935000_59937000
Isoform_203281_4	chrX	-	2136	1	FSM	ENSMUSG00000045179.10	ENSMUST00000135107.4	2065	1	-75	4	-75	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTGGAGTCCTGATA	NA	False	NA	-4	True	AATAAA	-11	NA	59937111	59934975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_59935000_59937100
Isoform_203282_13	chrX	-	185	1	Intergenic	novelGene_11988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59949613	59949428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_59949400_59949600
Isoform_203284_9	chrX	+	1448	1	FSM	ENSMUSG00000057615.6	ENSMUST00000075983.6	1459	1	0	11	0	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAGCAGCAAACTGTTG	NA	False	NA	2	True	AATAAA	-15	NA	60753102	60754550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_60753100_60754600
Isoform_203285_16	chrX	+	1364	1	FSM	ENSMUSG00000057615.6	ENSMUST00000075983.6	1459	1	90	5	90	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAAACTGTTGTCTTTT	NA	False	NA	8	True	AATAAA	-21	NA	60753192	60754556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_60753200_60754600
Isoform_203287_13	chrX	-	323	1	FSM	ENSMUSG00000081752.4	ENSMUST00000121773.2	1101	1	-49	827	-49	-827	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAGAAGAAAAAATGAAA	NA	False	NA	NA	False	AAGAAA	-19	NA	61820340	61820017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_61820000_61820300
Isoform_203288_14	chrX	-	195	1	Intergenic	novelGene_11830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGACATTCTGAGTGAC	6443	False	NA	NA	False	NA	NA	NA	7961403	7961208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_7961200_7961400
Isoform_203289_74	chrX	-	178	1	Intergenic	novelGene_11990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	62977544	62977366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_62977400_62977500
Isoform_203292_16	chrX	+	2694	1	Intergenic	novelGene_11991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAAATTTGCCACAGT	NA	False	NA	NA	False	NA	NA	NA	63977045	63979739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_63977000_63979700
Isoform_203293_89	chrX	+	5111	2	Intergenic	novelGene_11992	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	63977045	63982203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_63977469_63977515
Isoform_203298_4	chrX	+	4575	2	Intergenic	novelGene_11993	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	63977603	63982200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_63980669_63980690
Isoform_203308_4	chrX	+	1631	2	Intergenic	novelGene_11994	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	63980553	63982206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_63980669_63980690
Isoform_20331_188	chr11	+	2685	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	37	7	-16	1	multi-exon	FALSE	canonical	3	40	junction_1	25.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	49141375	49153850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49141483_49142376_49142502_49151397
Isoform_203317_3	chrX	-	164	1	Intergenic	novelGene_11831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAACAAACA	6039	False	NA	NA	False	NA	NA	NA	7961807	7961643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_7961600_7961800
Isoform_203318_3	chrX	+	180	1	Intergenic	novelGene_11995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	67407735	67407915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_67407700_67407900
Isoform_20332_11	chr11	+	2750	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	-29	8	-29	0	multi-exon	FALSE	canonical	3	40	junction_1	25.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49141309	49153849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49141483_49142376_49142502_49151397
Isoform_203325_11	chrX	-	173	1	Intergenic	novelGene_11996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67814584	67814411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_67814400_67814600
Isoform_203327_45	chrX	+	4229	1	FSM	ENSMUSG00000071748.3	ENSMUST00000096420.3	4226	1	13	-16	13	16	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGGAAGACACAGGTAAA	NA	False	NA	NA	False	ATTAAA	-33	NA	67864711	67868940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_67864700_67868900
Isoform_203329_4	chrX	-	170	1	Intergenic	novelGene_11832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCAGGCTGGTG	2868	False	NA	NA	False	NA	NA	NA	7964978	7964808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_7964800_7965000
Isoform_203330_110	chrX	-	1392	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	-41	-601	-41	601	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTCTCTGG	NA	False	NA	NA	False	AGTAAA	-19	NA	68649892	68648500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_68648500_68649900
Isoform_203334_7454	chrX	-	831	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	-41	-40	-41	40	mono-exon	FALSE	NA	NA	NA	NA	NA	7454	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	68649892	68649061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_68649100_68649900
Isoform_20334_10	chr11	+	3461	2	ISM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	154	8	76	0	3prime_fragment	FALSE	canonical	3	91	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49141492	49153849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_49142502_49151397
Isoform_203349_5	chrX	+	178	1	Intergenic	novelGene_11833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGAAACGA	3923	False	NA	NA	False	NA	NA	NA	7970276	7970454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_7970300_7970500
Isoform_203350_13	chrX	+	175	1	Intergenic	novelGene_11998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	70500909	70501084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_70500900_70501100
Isoform_203352_12	chrX	-	179	1	Intergenic	novelGene_12000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70589844	70589665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_70589700_70589800
Isoform_203355_4	chr17	-	168	1	Intergenic	novelGene_5051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATACCCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	55145146	55144978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_55145000_55145100
Isoform_203356_30	chrX	+	177	1	Intergenic	novelGene_12002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGTGTGTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	70796354	70796531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_70796400_70796500
Isoform_203358_191	chrX	-	230	1	Intergenic	novelGene_11928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACACAAAAGAGATTGA	NA	False	NA	NA	False	NA	NA	NA	38781002	38780772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_38780800_38781000
Isoform_203359_10	chrX	-	201	1	Intergenic	novelGene_12004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGTGGAAATATAGAATG	NA	False	NA	NA	False	NA	NA	NA	71944773	71944572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_71944600_71944800
Isoform_203363_83	chrX	-	153	1	Intergenic	novelGene_12005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAGATGGAGA	5563	False	NA	NA	False	NA	NA	NA	72269189	72269036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_72269000_72269200
Isoform_203364_8	chrX	+	1695	1	FSM	ENSMUSG00000078317.7	ENSMUST00000105111.4	2505	1	-195	1005	-195	-1005	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTGGCGTATTGAT	NA	False	NA	4	True	NA	NA	NA	72271701	72273396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72271700_72273400
Isoform_203365_112	chrX	+	1506	1	FSM	ENSMUSG00000078317.7	ENSMUST00000105111.4	2505	1	6	993	6	-993	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGATTTCCTTTTCTTT	NA	False	NA	16	True	NA	NA	NA	72271902	72273408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_72271900_72273400
Isoform_203367_9	chrX	+	176	1	Intergenic	novelGene_12006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTTAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	72368361	72368537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_72368400_72368500
Isoform_20337_1198	chr11	+	2954	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	-8	1	1	-1	multi-exon	FALSE	canonical	2	320	junction_10	53.5808204583287	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49685005	49729439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
Isoform_20338_146	chr11	+	2976	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	-30	1	-21	-1	multi-exon	FALSE	canonical	2	320	junction_10	53.5808204583287	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49684983	49729439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
Isoform_203395_8	chrX	-	801	1	Antisense	novelGene_ENSMUSG00000031383.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGTAACAGTCAC	NA	False	NA	NA	False	NA	NA	NA	72687116	72686315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_-_72686300_72687100
Isoform_2034_65	chr10	-	2363	13	FSM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	150	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	7.72801541291309	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42354411	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
Isoform_203406_16	chrX	-	176	1	Intergenic	novelGene_12007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72779225	72779049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_72779000_72779200
Isoform_203407_193	chrX	-	172	1	Intergenic	novelGene_12008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	72783324	72783152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_72783200_72783300
Isoform_203415_4	chrX	+	171	1	Intergenic	novelGene_12011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAAAATCTCCA	NA	False	NA	NA	False	NA	NA	NA	72917798	72917969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_72917800_72918000
Isoform_203417_52	chrX	-	162	1	Intergenic	novelGene_12012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72946275	72946113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_72946100_72946300
Isoform_203418_7	chrX	+	180	1	Intergenic	novelGene_12013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAGAGAGCGCG	NA	False	NA	NA	False	NA	NA	NA	72970418	72970598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_72970400_72970600
Isoform_203419_6	chrX	-	173	1	Intergenic	novelGene_11816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAGGGTTTCTAAG	NA	False	NA	NA	False	NA	NA	NA	5652785	5652612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_5652600_5652800
Isoform_203420_16	chrX	-	189	1	Intergenic	novelGene_12014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGACAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	72975217	72975028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_72975000_72975200
Isoform_203427_26	chrX	+	164	1	Intergenic	novelGene_12015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAAAAATTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	73040199	73040363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_73040200_73040400
Isoform_203428_28	chrX	-	173	1	Intergenic	novelGene_12016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	73047199	73047026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_73047000_73047200
Isoform_203429_21	chrX	-	177	1	Intergenic	novelGene_12017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	73054340	73054163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_73054200_73054300
Isoform_203431_12	chrX	+	174	1	Intergenic	novelGene_11834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTACTG	NA	False	NA	NA	False	NA	NA	NA	8018500	8018674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_8018500_8018700
Isoform_203433_5	chr4	-	203	1	FSM	ENSMUSG00000083011.2	ENSMUST00000118069.2	1212	1	1044	-35	1044	35	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATAAAATATTTCTACTA	NA	False	NA	NA	False	NA	NA	NA	112812439	112812236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr4_-_112812200_112812400
Isoform_203438_6	chrX	+	182	1	Intergenic	novelGene_12018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGTGTGTAGC	NA	False	NA	NA	False	NA	NA	NA	73302761	73302943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_73302800_73302900
Isoform_203439_32	chrX	+	2278	1	FSM	ENSMUSG00000119320.1	ENSMUST00000082806.3	137	1	-1626	-515	-1626	515	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314463	73316741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_73314500_73316700
Isoform_203442_8	chrX	+	173	1	Intergenic	novelGene_12019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	73319244	73319417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_73319200_73319400
Isoform_203445_29	chrUn_GL456367v1	+	194	1	Intergenic	novelGene_11776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTGTTTTCAGGC	NA	False	NA	NA	False	NA	NA	NA	12382	12576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_GL456367v1_+_12400_12600
Isoform_203447_19	chrX	-	174	1	Intergenic	novelGene_12021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACATTTCCCAAAAAAA	8263	False	NA	NA	False	NA	NA	NA	73393454	73393280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_73393300_73393500
Isoform_203448_4	chrX	+	359	1	Antisense	novelGene_ENSMUSG00000015289.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAACAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	73395305	73395664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_+_73395300_73395700
Isoform_203450_4	chrX	+	212	1	Intergenic	novelGene_12022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGTCAACATATTGCT	NA	False	NA	NA	False	NA	NA	NA	73400896	73401108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_73400900_73401100
Isoform_203452_10	chrX	-	196	1	Intergenic	novelGene_11835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGAGAGGACCAGGCAT	NA	False	NA	NA	False	NA	NA	NA	8046982	8046786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_8046800_8047000
Isoform_203460_4	chrX	+	175	1	Intergenic	novelGene_12025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	74109701	74109876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_74109700_74109900
Isoform_203471_5	chrX	-	200	1	Intergenic	novelGene_12026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGGTTTATAGTTCCT	9507	False	NA	NA	False	NA	NA	NA	74272215	74272015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_74272000_74272200
Isoform_203472_5	chrX	+	177	1	Intergenic	novelGene_12027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGTATGCACATTT	1584	False	NA	NA	False	NA	NA	NA	74308773	74308950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_74308800_74309000
Isoform_203474_5	chrX	+	179	1	Intergenic	novelGene_12028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAAAACTTA	6075	False	NA	NA	False	NA	NA	NA	74319322	74319501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_74319300_74319500
Isoform_203475_4	chrX	-	194	1	Intergenic	novelGene_12029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCATTTTCTTCGCCTCT	NA	False	NA	NA	False	NA	NA	NA	74321683	74321489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_74321500_74321700
Isoform_203476_3	chrX	-	2999	1	NIC	ENSMUSG00000090110.9	novel	992	3	NA	NA	16	-8481	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAAATGTCAACATGTT	NA	False	NA	NA	False	AATAAA	-22	NA	74460155	74457156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_74457200_74460200
Isoform_203480_3	chrX	-	189	1	Intergenic	novelGene_11836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCAGATTGAGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	8062247	8062058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_8062100_8062200
Isoform_203482_33	chrX	+	174	1	Intergenic	novelGene_12030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	5807	False	NA	NA	False	NA	NA	NA	75110248	75110422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_75110200_75110400
Isoform_203483_19	chr3	-	177	1	Intergenic	novelGene_7155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTAAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	90215215	90215038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_90215000_90215200
Isoform_203484_15	chrX	-	157	1	Intergenic	novelGene_11837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8365	False	NA	NA	False	NA	NA	NA	8082103	8081946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_8081900_8082100
Isoform_203486_8	chrX	-	176	1	Intergenic	novelGene_12031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAGATCAGCCTGAGC	NA	False	NA	NA	False	NA	NA	NA	76548605	76548429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_76548400_76548600
Isoform_203487_51	chrX	+	173	1	Intergenic	novelGene_12032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	76562261	76562434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_76562300_76562400
Isoform_2035_18	chr10	-	2446	13	FSM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	67	0	67	0	multi-exon	FALSE	canonical	3	47	junction_11	7.72801541291309	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42354494	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
Isoform_203507_4	chrX	+	177	1	Intergenic	novelGene_12033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATTAATTGCTAT	NA	False	NA	NA	False	NA	NA	NA	76755327	76755504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_76755300_76755500
Isoform_203509_5	chrX	+	321	1	Intergenic	novelGene_11838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8086933	8087254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_8086900_8087300
Isoform_203510_9	chrX	-	169	1	Intergenic	novelGene_12034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACATAAATACATAAAT	NA	False	NA	NA	False	NA	NA	NA	77247097	77246928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_77246900_77247100
Isoform_203511_29	chrX	-	296	1	Intergenic	novelGene_11839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTCTTTTTGTTTCCG	NA	False	NA	NA	False	AATAAA	-5	NA	8092567	8092271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_8092300_8092600
Isoform_203512_31	chrX	-	175	1	Intergenic	novelGene_11840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGAGCAAGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	8092567	8092392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_8092400_8092600
Isoform_203515_4	chrX	+	302	1	FSM	ENSMUSG00000081049.2	ENSMUST00000118723.2	402	1	-9	109	-9	-109	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGACCTCCCGAA	NA	False	NA	NA	False	NA	NA	NA	78238643	78238945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_78238600_78238900
Isoform_203521_50	chrX	-	1254	1	FSM	ENSMUSG00000081221.5	ENSMUST00000121831.2	999	1	-71	-184	-71	184	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAAAAAAAACAAA	NA	False	NA	NA	False	AATAAA	-15	NA	79238529	79237275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_79237300_79238500
Isoform_203522_16	chrX	+	176	1	Intergenic	novelGene_11841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAAGGGGGGGTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	8097427	8097603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_8097400_8097600
Isoform_203523_447	chrX	+	1879	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	-54	-757	-54	757	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAGTAATAATGGTCAA	NA	False	NA	NA	False	AAAAAG	-28	NA	79500293	79502172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_79500300_79502200
Isoform_20353_12	chr11	+	2128	12	FSM	ENSMUSG00000020366.19	ENSMUST00000109179.9	4682	12	24	2530	4	581	multi-exon	FALSE	canonical	3	70	junction_7	138.247771341862	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGATGTTTTAGGCT	NA	False	NA	NA	False	AATAAA	-21	NA	49737601	49774718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
Isoform_203556_3	chrX	-	206	1	Intergenic	novelGene_12036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATGTCCTTTCCCCTTA	NA	False	NA	NA	False	NA	NA	NA	80418741	80418535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_80418500_80418700
Isoform_203559_3	chrX	+	195	1	Intergenic	novelGene_12037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCATCACATTTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	82740068	82740263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_82740100_82740300
Isoform_20356_7	chr11	+	4655	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	21	1	1	-1	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTACTTGTGGTTTT	NA	False	NA	13	True	NA	NA	NA	49737598	49777247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_203561_410	chrX	-	177	1	Intergenic	novelGene_11842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8104839	8104662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_8104700_8104800
Isoform_203562_3	chrX	-	7444	1	Intergenic	novelGene_12038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATCAATAAGAGAAACAAA	NA	False	NA	NA	False	TTTAAA	-41	NA	84165006	84157562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_84157600_84165000
Isoform_20357_30	chr11	+	2120	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	21	2536	1	575	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAATTTGTGATGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	49737598	49774712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_203573_24	chrX	+	198	1	Intergenic	novelGene_11843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACTAATTTGTCTAAA	NA	False	NA	NA	False	NA	NA	NA	8107228	8107426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_8107200_8107400
Isoform_203579_36	chrX	-	191	1	Intergenic	novelGene_12039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAGCAAAAAGTACAGTGA	NA	False	NA	NA	False	NA	NA	NA	86194543	86194352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_86194400_86194500
Isoform_20358_28	chr11	+	4335	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	15	327	-5	-317	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTACAGCATGTCCAA	NA	False	NA	20	True	AATACA	-19	NA	49737592	49776921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_203581_16	chrX	+	169	1	Intergenic	novelGene_12040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTTGTAACATATGG	NA	False	NA	NA	False	NA	NA	NA	86204585	86204754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_86204600_86204800
Isoform_203582_3	chrX	-	168	1	Intergenic	novelGene_12001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATTACAG	NA	False	NA	NA	False	NA	NA	NA	70726801	70726633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_70726600_70726800
Isoform_203583_7	chrX	-	6952	1	Intergenic	novelGene_12041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACTAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-35	NA	87646476	87639524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_87639500_87646500
Isoform_203586_77	chrX	-	179	1	Intergenic	novelGene_12042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCCCTACCATA	NA	False	NA	NA	False	NA	NA	NA	87966902	87966723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_87966700_87966900
Isoform_20359_20	chr11	+	4422	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	21	234	1	-224	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTGAAGTGTCGTAA	NA	False	NA	113	True	NA	NA	NA	49737598	49777014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_203590_7	chrX	+	172	1	Intergenic	novelGene_12044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTAAGAAAATATGAAAA	NA	False	NA	NA	False	NA	NA	NA	88926738	88926910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_88926700_88926900
Isoform_203592_3	chrX	+	177	1	Intergenic	novelGene_12045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATATCATGGC	NA	False	NA	NA	False	NA	NA	NA	89904571	89904748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_89904600_89904700
Isoform_203593_32	chrX	+	198	1	Intergenic	novelGene_12046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACAAAGAGCCGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	90385409	90385607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_90385400_90385600
Isoform_203595_3	chrX	+	748	1	Intergenic	novelGene_11844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGAGACAGGGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	8119026	8119774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_8119000_8119800
Isoform_203597_15	chrX	-	176	1	Intergenic	novelGene_12047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	91166965	91166789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_91166800_91167000
Isoform_203599_21	chrX	+	202	1	Intergenic	novelGene_11845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGGTCTTCCTATATA	NA	False	NA	10	True	NA	NA	NA	8121512	8121714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_8121500_8121700
Isoform_203600_6	chrX	+	154	1	Intergenic	novelGene_12048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	92253042	92253196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_92253000_92253200
Isoform_203603_6	chrX	+	157	1	Intergenic	novelGene_12049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGCGTTTTATAGCAT	NA	False	NA	NA	False	AATAAA	-21	NA	92384937	92385094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_92384900_92385100
Isoform_203605_20	chrX	-	178	1	ISM	ENSMUSG00000006678.7	ENSMUST00000127718.2	3612	2	8668	222	8640	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATAGCTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	92667081	92666903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_92666900_92667100
Isoform_203607_40	chrX	-	176	1	Intergenic	novelGene_11846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	8153465	8153289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_8153300_8153500
Isoform_203608_24	chrX	+	178	1	Intergenic	novelGene_12050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	92679328	92679506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_92679300_92679500
Isoform_20361_43	chr11	+	2153	12	FSM	ENSMUSG00000020366.19	ENSMUST00000164643.8	4682	12	-1	2530	-1	581	multi-exon	FALSE	canonical	3	84	junction_11	90.1850256027862	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGATGTTTTAGGCT	NA	False	NA	NA	False	AATAAA	-21	NA	49737576	49774718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
Isoform_203610_12	chrX	-	203	1	Intergenic	novelGene_12051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACCAACTTACTCTATG	NA	False	NA	NA	False	NA	NA	NA	92701471	92701268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_92701300_92701500
Isoform_203612_15	chrX	-	178	1	Intergenic	novelGene_11847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGATGTAGAAGTC	NA	False	NA	NA	False	NA	NA	NA	8155769	8155591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_8155600_8155800
Isoform_203613_13	chrX	+	177	1	Intergenic	novelGene_12052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAAAATGATC	NA	False	NA	NA	False	NA	NA	NA	92821958	92822135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_92822000_92822100
Isoform_203614_15	chrX	-	178	1	Intergenic	novelGene_12053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	92836078	92835900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_92835900_92836100
Isoform_203615_3	chrX	-	294	1	Intergenic	novelGene_12054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	93068016	93067722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93067700_93068000
Isoform_203617_106	chrX	+	171	1	Intergenic	novelGene_12055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	93088641	93088812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_93088600_93088800
Isoform_203624_13	chrX	+	170	1	Intergenic	novelGene_12056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	93133185	93133355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_93133200_93133400
Isoform_203625_5	chrX	-	180	1	Intergenic	novelGene_12057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAATTGTCC	NA	False	NA	NA	False	NA	NA	NA	93134390	93134210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93134200_93134400
Isoform_203626_7	chrX	-	172	1	Intergenic	novelGene_12058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	93139117	93138945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93138900_93139100
Isoform_203627_4	chrX	+	1084	1	Antisense	novelGene_ENSMUSG00000079509.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-34	NA	93166295	93167379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_+_93166300_93167400
Isoform_20363_10	chr11	+	4678	12	FSM	ENSMUSG00000020366.19	ENSMUST00000164643.8	4682	12	4	0	2	0	multi-exon	FALSE	canonical	3	84	junction_11	90.1850256027862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTACTTGTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	49737581	49777248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
Isoform_203630_5	chrX	-	154	1	Intergenic	novelGene_11848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAGTCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8283961	8283807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_8283800_8284000
Isoform_203632_279	chrX	-	192	1	Intergenic	novelGene_12060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93207300	93207108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93207100_93207300
Isoform_203633_17	chrX	-	156	1	Intergenic	novelGene_12061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGAGGGCTAT	NA	False	NA	NA	False	NA	NA	NA	93215276	93215120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93215100_93215300
Isoform_203634_81	chrX	-	176	1	Intergenic	novelGene_12062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTAGTTAAGGT	NA	False	NA	NA	False	NA	NA	NA	93216996	93216820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93216800_93217000
Isoform_203637_28	chrX	-	176	1	Intergenic	novelGene_12063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	93231531	93231355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93231400_93231500
Isoform_203649_17	chr5	-	191	1	Intergenic	novelGene_8336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCGCCGTACACTTGAA	8425	False	NA	NA	False	NA	NA	NA	9153302	9153111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_9153100_9153300
Isoform_203650_7	chrX	+	188	1	Intergenic	novelGene_12064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGGTAGAAACCAAAATG	NA	False	NA	NA	False	NA	NA	NA	93257247	93257435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_93257200_93257400
Isoform_203652_4	chrX	+	175	1	Intergenic	novelGene_12065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAAGAAGTGT	8248	False	NA	NA	False	NA	NA	NA	93294758	93294933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_93294800_93294900
Isoform_203653_4	chrX	-	356	1	Intergenic	novelGene_12066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACATCTTTGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	93305773	93305417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93305400_93305800
Isoform_203654_43	chr3	-	176	1	Intergenic	novelGene_7291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	116517193	116517017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_116517000_116517200
Isoform_203655_4	chrX	-	168	1	Intergenic	novelGene_12068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTTTCTATAAT	NA	False	NA	NA	False	NA	NA	NA	93639608	93639440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_93639400_93639600
Isoform_203656_49	chrX	+	2476	1	FSM	ENSMUSG00000071723.8	ENSMUST00000096368.4	2491	1	8	7	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGAAATGTGTTTGAA	4264	False	NA	15	True	AATAAA	-21	NA	93679682	93682158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_93679700_93682200
Isoform_203658_3	chrX	+	4805	1	FSM	ENSMUSG00000073062.4	ENSMUST00000101388.4	5619	1	814	0	814	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCTGTGGTCTTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	93768988	93773793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_93769000_93773800
Isoform_203659_17	chrX	-	2133	1	FSM	ENSMUSG00000082776.4	ENSMUST00000118127.2	1416	1	-59	-658	-59	658	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACTGGCTGGTTTTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	93817699	93815566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_93815600_93817700
Isoform_20366_125	chr11	+	4350	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	-3	328	-1	-318	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTACAGCATGTCCA	NA	False	NA	19	True	AATACA	-18	NA	49737576	49776920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_203660_17	chrX	-	3497	1	FSM	ENSMUSG00000087522.4	ENSMUST00000142240.2	1245	1	-362	-1890	-362	1890	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTGGTGGGAGATGAG	NA	False	NA	NA	False	NA	NA	NA	94042651	94039154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_94039200_94042700
Isoform_203663_26	chrX	-	4173	1	FSM	ENSMUSG00000071722.5	ENSMUST00000096367.5	4173	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGTAGTGACTTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	94070288	94066115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_94066100_94070300
Isoform_203665_144	chrX	-	177	1	Intergenic	novelGene_12069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAGACA	9465	False	NA	NA	False	NA	NA	NA	94112858	94112681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_94112700_94112900
Isoform_203666_173	chrX	+	177	1	Intergenic	novelGene_12070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	94427761	94427938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_94427800_94427900
Isoform_20367_184	chr11	+	2126	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	19	2530	1	581	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGATGTTTTAGGCT	NA	False	NA	NA	False	AATAAA	-21	NA	49737598	49774718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_203671_11	chrX	+	2572	1	FSM	ENSMUSG00000052364.5	ENSMUST00000064196.5	2583	1	8	3	8	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCGTTGTCTCATAAT	NA	False	NA	NA	False	AATACA	-22	NA	8758628	8761200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_8758600_8761200
Isoform_203674_80	chrX	-	2163	1	FSM	ENSMUSG00000073294.5	ENSMUST00000117544.2	2201	1	30	8	30	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTAGTCTCTTTGTTG	NA	False	NA	-7	True	AATAAA	-16	NA	5995443	5993280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_5993300_5995400
Isoform_203675_4	chrX	+	181	1	Intergenic	novelGene_12074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACAAAGAAGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	95125591	95125772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_95125600_95125800
Isoform_20368_91	chr11	+	4421	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	19	235	1	-225	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGTTGAAGTGTCGTA	NA	False	NA	112	True	NA	NA	NA	49737598	49777013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_203686_6	chrX	+	1624	1	Intergenic	novelGene_12075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	95964725	95966349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_95964700_95966300
Isoform_203689_18	chrX	-	3078	1	NIC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	-19	-32568	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACACCAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	96420797	96417719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_96417700_96420800
Isoform_20369_40	chr11	+	4656	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	19	0	1	0	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTACTTGTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	49737598	49777248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_203690_3	chrX	+	191	1	Intergenic	novelGene_12076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCACACTCTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	97347890	97348081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_97347900_97348100
Isoform_203692_351	chrX	-	849	1	FSM	ENSMUSG00000060685.5	ENSMUST00000075792.5	850	1	-15	16	-15	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTGAAGTATAAAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8842813	8841964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8842000_8842800
Isoform_203693_83	chrX	-	882	1	FSM	ENSMUSG00000060685.5	ENSMUST00000075792.5	850	1	-48	16	-48	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTGAAGTATAAAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8842846	8841964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8842000_8842800
Isoform_203695_5	chrX	+	173	1	Intergenic	novelGene_12077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGTTAACGA	NA	False	NA	NA	False	NA	NA	NA	97813224	97813397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_97813200_97813400
Isoform_203696_42	chrX	-	877	1	FSM	ENSMUSG00000078206.2	ENSMUST00000105004.2	856	1	-29	8	-29	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGAAGTATCAAGTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8853023	8852146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8852100_8853000
Isoform_203697_133	chrX	-	848	1	FSM	ENSMUSG00000078206.2	ENSMUST00000105004.2	856	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGAAGTATCAAGTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8852994	8852146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_8852100_8853000
Isoform_203698_4	chrX	+	436	1	FSM	ENSMUSG00000071815.7	ENSMUST00000096509.7	841	1	400	5	400	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGTATCAAGTTGATGT	7082	False	NA	26	True	AATAAA	-26	NA	8900131	8900567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_8900100_8900600
Isoform_2037_3	chr10	-	2513	13	FSM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	-3	3	-3	0	multi-exon	FALSE	canonical	3	47	junction_11	7.72801541291309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGAGCTTGTCTGATTC	NA	False	NA	-2	True	AATAAA	-15	NA	42354564	42188583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
Isoform_203700_23	chrX	+	250	1	Intergenic	novelGene_12078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAGTATTACCCTAATC	NA	False	NA	NA	False	NA	NA	NA	98364386	98364636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_98364400_98364600
Isoform_203704_371	chrX	+	2341	1	FSM	ENSMUSG00000051582.3	ENSMUST00000060241.3	873	1	-105	-1363	-105	1363	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACCTGGTTTGCATTTC	NA	False	NA	2	True	AATAAA	-12	NA	99472513	99474854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_99472500_99474900
Isoform_203713_5	chrX	-	180	1	Intergenic	novelGene_12079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	99595191	99595011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_99595000_99595200
Isoform_203715_60	chrX	+	158	1	Intergenic	novelGene_12080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	99738021	99738179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_99738000_99738200
Isoform_203716_21	chrX	+	177	1	Intergenic	novelGene_12081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATGTAGCATGTT	NA	False	NA	NA	False	NA	NA	NA	99919013	99919190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_99919000_99919200
Isoform_203717_23	chrX	+	902	1	FSM	ENSMUSG00000072249.4	ENSMUST00000097029.4	847	1	-63	8	-63	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGAAGTATCAAATTGA	NA	False	NA	22	True	AATAAA	-22	NA	8929190	8930092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_8929200_8930100
Isoform_203718_8	chrX	+	175	1	Intergenic	novelGene_12082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTAAAATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	100080401	100080576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100080400_100080600
Isoform_203719_27	chrX	+	174	1	Intergenic	novelGene_12083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTTTGTT	NA	False	NA	NA	False	AAAAAG	-6	NA	100111406	100111580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100111400_100111600
Isoform_203721_5	chrX	+	159	1	Intergenic	novelGene_12084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	100134916	100135075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100134900_100135100
Isoform_203722_11	chrX	-	176	1	Intergenic	novelGene_12085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	100143264	100143088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100143100_100143300
Isoform_203724_6	chrX	-	177	1	Intergenic	novelGene_12086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGTTGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	100151599	100151422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100151400_100151600
Isoform_203725_5	chrX	+	186	1	Intergenic	novelGene_12087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCAAGGTTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	100153954	100154140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100154000_100154100
Isoform_203728_5	chrX	+	840	1	FSM	ENSMUSG00000083123.2	ENSMUST00000122268.2	528	1	-152	-160	-152	160	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTGAAGTATAAAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8946130	8946970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_8946100_8947000
Isoform_203729_12	chrX	-	180	1	Intergenic	novelGene_12089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	100187204	100187024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100187000_100187200
Isoform_203733_3	chrX	+	881	1	ISM	ENSMUSG00000042903.9	ENSMUST00000062000.6	3162	3	5465	0	5172	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTTCTGGTTTCTGCT	8823	False	NA	21	True	AATAAA	-28	NA	100303598	100304479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_100303600_100304500
Isoform_203737_67	chrX	-	170	1	Intergenic	novelGene_12090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGCAACTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	100490585	100490415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100490400_100490600
Isoform_20374_8	chr11	+	4319	12	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	-5	-313	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	104.259609224774	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49737572	49776925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49760038_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_203744_59	chr4	-	190	2	Antisense	novelGene_ENSMUSG00000088349.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAACCATTGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116912076	116686057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_-_116686068_116911896
Isoform_203746_16	chrX	-	157	1	Intergenic	novelGene_12091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	100535813	100535656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100535700_100535800
Isoform_203747_13	chrX	-	175	1	Intergenic	novelGene_11849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAAAGAGATACATT	NA	False	NA	NA	False	NA	NA	NA	9143705	9143530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_9143500_9143700
Isoform_203752_9	chrX	+	219	1	Intergenic	novelGene_12092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTAGAGTTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	100571231	100571450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100571200_100571400
Isoform_203759_4	chrX	-	307	1	Intergenic	novelGene_12093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100660969	100660662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100660700_100661000
Isoform_203761_14	chr8	-	182	1	Intergenic	novelGene_10547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	23380931	23380749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_23380700_23380900
Isoform_203762_9	chrX	+	187	1	Intergenic	novelGene_12095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGGAACTATTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	100676805	100676992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100676800_100677000
Isoform_203763_15	chrX	-	176	1	Intergenic	novelGene_12096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCACGT	NA	False	NA	NA	False	NA	NA	NA	100688426	100688250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100688200_100688400
Isoform_203766_3	chrX	-	326	1	Intergenic	novelGene_12097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100714398	100714072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100714100_100714400
Isoform_20377_140	chr11	+	1483	9	FSM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	15	4	15	-4	multi-exon	FALSE	canonical	3	193	junction_8	44.3931300991494	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCCTTCGCCAGCGTGT	NA	False	NA	20	True	NA	NA	NA	49916189	49995576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
Isoform_20378_53	chr11	+	1531	9	FSM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	-31	2	-29	-2	multi-exon	FALSE	canonical	3	193	junction_8	44.3931300991494	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTCGCCAGCGTGTGT	NA	False	NA	22	True	NA	NA	NA	49916143	49995578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
Isoform_203782_10	chrX	-	190	1	Intergenic	novelGene_12098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	100731029	100730839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100730800_100731000
Isoform_203784_3	chrX	+	213	1	Intergenic	novelGene_12100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCTGGTTGAAGTTAT	8498	False	NA	28	True	AATAAA	-23	NA	100749590	100749803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100749600_100749800
Isoform_203785_23	chrX	-	4041	1	FSM	ENSMUSG00000084197.2	ENSMUST00000122027.2	526	1	-488	-3027	-488	3027	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100753655	100749614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_100749600_100753700
Isoform_203786_10	chrX	+	200	1	Intergenic	novelGene_12101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAAGGTTTAAATATTG	3341	False	NA	NA	False	NA	NA	NA	100771071	100771271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_100771100_100771300
Isoform_203787_33	chrX	+	171	1	Intergenic	novelGene_11817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	6377299	6377470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_6377300_6377500
Isoform_203788_7	chrX	-	176	1	Intergenic	novelGene_12102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAAGATTGTGGCA	NA	False	NA	NA	False	NA	NA	NA	100773073	100772897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100772900_100773100
Isoform_20379_15	chr11	+	1840	9	FSM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	-338	0	-336	0	multi-exon	FALSE	canonical	3	193	junction_8	44.3931300991494	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCGCCAGCGTGTGTTT	NA	False	NA	24	True	NA	NA	NA	49915836	49995580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
Isoform_203791_11	chrX	-	177	1	Intergenic	novelGene_12103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGTAAGACAGTT	NA	False	NA	NA	False	NA	NA	NA	100964691	100964514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_100964500_100964700
Isoform_203792_20	chrX	+	182	1	Intergenic	novelGene_12104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	101083253	101083435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_101083300_101083400
Isoform_203793_24	chrX	-	178	1	Intergenic	novelGene_12105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTGTATATTGAAA	NA	False	NA	NA	False	NA	NA	NA	101100134	101099956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_101100000_101100100
Isoform_203794_90	chrX	+	169	1	Intergenic	novelGene_12106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACGAAAC	NA	False	NA	NA	False	NA	NA	NA	101174718	101174887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_101174700_101174900
Isoform_203795_3	chrX	+	173	1	Intergenic	novelGene_12107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTATAAAAAGAAAATATC	NA	False	NA	NA	False	NA	NA	NA	101180781	101180954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_101180800_101181000
Isoform_2038_7	chr10	-	2354	13	NNC	ENSMUSG00000038302.15	novel	2552	14	NA	NA	3199	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	15.7524248574272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGAGCTTGTCTGATTC	NA	False	NA	-2	True	AATAAA	-15	NA	42351077	42188583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42350930
Isoform_203808_22	chrX	-	174	1	Intergenic	novelGene_12108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	101247770	101247596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_101247600_101247800
Isoform_203810_18	chrX	-	214	1	Intergenic	novelGene_12110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAAAGAAAAGAAG	9543	False	NA	NA	False	NA	NA	NA	101258680	101258466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_101258500_101258700
Isoform_203812_12	chrX	-	209	1	Intergenic	novelGene_12111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTTTACAAAATATATT	9131	False	NA	NA	False	NA	NA	NA	101259092	101258883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_101258900_101259100
Isoform_203816_25	chrX	-	180	1	Intergenic	novelGene_12112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACCTTCTATCTC	NA	False	NA	NA	False	NA	NA	NA	101277903	101277723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_101277700_101277900
Isoform_203817_27	chrX	-	179	1	Intergenic	novelGene_12113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	101284410	101284231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_101284200_101284400
Isoform_203819_22	chrX	-	156	1	Intergenic	novelGene_11851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAGTCTTAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	9803317	9803161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_9803200_9803300
Isoform_20382_43	chr11	+	1414	8	FSM	ENSMUSG00000020376.18	ENSMUST00000054684.14	1415	8	-8	9	-8	-4	multi-exon	FALSE	canonical	3	67	junction_7	82.1161447249552	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCCTTCGCCAGCGTGT	NA	False	NA	20	True	NA	NA	NA	49916164	49995576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49995375
Isoform_203822_3	chrX	-	1217	1	Genic_Genomic	ENSMUSG00000048949.9	novel	NA	NA	NA	NA	1326	245	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	102207687	102206470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_-_102206500_102207700
Isoform_203823_49	chrX	-	221	1	Intergenic	novelGene_12114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGCTTCAGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	102261358	102261137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_102261100_102261400
Isoform_203824_41	chrX	+	180	1	Intergenic	novelGene_12115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAACTGAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	102285449	102285629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102285400_102285600
Isoform_203825_9	chrX	+	216	1	Intergenic	novelGene_12116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATACCTGTCAGGATCG	NA	False	NA	NA	False	NA	NA	NA	102285902	102286118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102285900_102286100
Isoform_203826_21	chrX	+	179	1	Intergenic	novelGene_12239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	149910234	149910413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_149910200_149910400
Isoform_203828_33	chrX	+	176	1	Intergenic	novelGene_12118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTAT	NA	False	NA	NA	False	NA	NA	NA	102301001	102301177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102301000_102301200
Isoform_203829_178	chr16	+	178	1	Intergenic	novelGene_4466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	31828261	31828439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_31828300_31828400
Isoform_20383_9	chr11	+	1749	8	FSM	ENSMUSG00000020376.18	ENSMUST00000054684.14	1415	8	-344	10	-344	-5	multi-exon	FALSE	canonical	3	67	junction_7	82.1161447249552	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATCCTTCGCCAGCGTG	NA	False	NA	19	True	NA	NA	NA	49915828	49995575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49995375
Isoform_203831_31	chrX	+	180	1	Intergenic	novelGene_12120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAGAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	102333328	102333508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102333300_102333500
Isoform_203834_6	chrX	-	156	1	Intergenic	novelGene_12121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102364053	102363897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_102363900_102364100
Isoform_203835_8	chrX	+	177	1	Intergenic	novelGene_12122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	102378211	102378388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102378200_102378400
Isoform_203836_173	chrX	+	160	1	Intergenic	novelGene_12123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGAACCTG	NA	False	NA	NA	False	NA	NA	NA	102380030	102380190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102380000_102380200
Isoform_203837_4	chrX	+	162	1	Intergenic	novelGene_12124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGCCTTTTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	102388638	102388800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102388600_102388800
Isoform_203838_29	chrX	+	174	1	Intergenic	novelGene_12125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102431063	102431237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102431100_102431200
Isoform_203839_142	chrX	-	179	1	Intergenic	novelGene_11852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAAAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	10231993	10231814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_10231800_10232000
Isoform_20384_11	chr11	+	1495	8	FSM	ENSMUSG00000020376.18	ENSMUST00000238748.2	7879	8	-20	6404	-19	-6404	multi-exon	FALSE	canonical	3	19	junction_7	98.8135742141716	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTTTGATGGCAGCATT	NA	False	NA	NA	False	NA	NA	NA	49916153	50010142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_50009871
Isoform_203842_4	chrX	+	2208	1	Genic_Genomic	ENSMUSG00000085715.3	novel	NA	NA	NA	NA	-67	-48749	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102475055	102477263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_102475100_102477300
Isoform_203844_3	chrX	-	3071	1	Intergenic	novelGene_12126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAAAATCTTACCTGAA	8858	False	NA	NA	False	NA	NA	NA	102496544	102493473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_102493500_102496500
Isoform_203845_3	chrX	-	3392	1	Intergenic	novelGene_12127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAAAATCTTACCTGAA	8537	False	NA	NA	False	NA	NA	NA	102496865	102493473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_102493500_102496900
Isoform_203846_6	chrX	+	192	1	Intergenic	novelGene_12128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAATTAAAGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	102575718	102575910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102575700_102575900
Isoform_203847_6	chrX	+	229	1	Intergenic	novelGene_12129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102656900	102657129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102656900_102657100
Isoform_20385_10	chr11	+	2209	7	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-33	21240	-33	584	5prime_fragment	FALSE	canonical	3	128	junction_6	10.6092203085597	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGCCCAAAACCAAAAAC	NA	False	NA	NA	False	AATAAA	-23	NA	50022189	50041617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528
Isoform_203852_4	chrX	+	199	1	Intergenic	novelGene_12130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTCTTCTTAAAGATT	NA	False	NA	NA	False	NA	NA	NA	102730936	102731135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102730900_102731100
Isoform_203853_4	chrX	-	178	1	Intergenic	novelGene_12131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAATAATACAGACTT	NA	False	NA	NA	False	NA	NA	NA	102766962	102766784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_102766800_102767000
Isoform_203854_7	chrX	+	167	1	Intergenic	novelGene_12132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAACAGAG	NA	False	NA	NA	False	NA	NA	NA	102971592	102971759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102971600_102971800
Isoform_20387_10	chr11	+	4511	22	FSM	ENSMUSG00000036644.16	ENSMUST00000101270.5	5213	22	-65	767	-65	-12	multi-exon	TRUE	canonical	3	13	junction_18	41.5114660552835	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAAAAGCACACTG	NA	False	NA	-5	True	AATAAA	-8	NA	50022157	50062845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
Isoform_20388_29	chr11	+	4467	22	FSM	ENSMUSG00000036644.16	ENSMUST00000101270.5	5213	22	-9	755	-9	0	multi-exon	FALSE	canonical	3	13	junction_18	41.5114660552835	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022213	50062857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
Isoform_203882_22	chrX	-	175	1	Intergenic	novelGene_12133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGTAGGTAGC	NA	False	NA	NA	False	NA	NA	NA	103011216	103011041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_103011000_103011200
Isoform_203883_80	chrX	+	1637	1	Intergenic	novelGene_12134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103017103	103018740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_103017100_103018700
Isoform_203884_17	chrX	-	846	1	NIC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	15	-2629	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAATTAAAAAA	2388	False	NA	NA	False	NA	NA	NA	103024875	103024029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_103024000_103024900
Isoform_203886_177	chrX	-	174	1	Intergenic	novelGene_12135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAATGTTCCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	103155528	103155354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_103155400_103155500
Isoform_203888_18	chrX	+	217	1	Intergenic	novelGene_12136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	103228455	103228672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_103228500_103228700
Isoform_203890_3	chrX	+	238	1	Intergenic	novelGene_11853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAAATGACCTAGCTC	NA	False	NA	NA	False	AGTAAA	-7	NA	10568848	10569086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_10568800_10569100
Isoform_203898_11	chrX	+	176	1	Intergenic	novelGene_12137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATGTAAGA	NA	False	NA	NA	False	NA	NA	NA	103387127	103387303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_103387100_103387300
Isoform_203899_7	chrX	+	2220	1	Genic_Genomic	ENSMUSG00000008035.13	novel	NA	NA	NA	NA	7	4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACAAGTGTGTGTT	1564	False	NA	NA	False	AATAAA	-19	NA	10583713	10585933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_10583700_10585900
Isoform_2039_7	chr10	-	2419	13	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	3137	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	15.7524248574272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42351139	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42350930
Isoform_20390_43	chr11	+	5162	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-9	-746	-9	-9	multi-exon	FALSE	canonical	3	113	junction_18	14.0538251020852	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTACTTTGTTTGTT	NA	False	NA	1	True	AATAAA	-9	NA	50022213	50063603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
Isoform_203904_1744	chrX	-	3232	1	FSM	ENSMUSG00000083327.2	ENSMUST00000120233.2	2406	1	-254	-572	-254	572	mono-exon	FALSE	NA	NA	NA	NA	NA	1744	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAAGAACAAATAAAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	103392094	103388862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103388900_103392100
Isoform_20391_273	chr11	+	4404	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-9	12	-9	-12	multi-exon	FALSE	canonical	3	113	junction_18	14.0538251020852	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAAAAGCACACTG	NA	False	NA	-5	True	AATAAA	-8	NA	50022213	50062845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
Isoform_20392_46	chr11	+	4377	20	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-39	-12	combination_of_known_splicesites	FALSE	canonical	3	18	junction_18	31.7647167454221	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAAAAGCACACTG	NA	False	NA	-5	True	AATAAA	-8	NA	50022183	50062845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
Isoform_203927_3219	chrX	-	2865	1	FSM	ENSMUSG00000083327.2	ENSMUST00000120233.2	2406	1	-254	-205	-254	205	mono-exon	FALSE	NA	NA	NA	NA	NA	3219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGGTGAAGAGTGAATTA	NA	False	NA	-8	True	AATAAA	-15	NA	103392094	103389229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103389200_103392100
Isoform_20393_7	chr11	+	5104	20	NIC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-6	-7	combination_of_known_splicesites	FALSE	canonical	3	18	junction_18	31.7647167454221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTACTTTGTTTGTTTA	NA	False	NA	3	True	AATAAA	-11	NA	50022216	50063605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
Isoform_20394_7	chr11	+	4188	20	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-30	-8	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	34.6020510816653	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGCACACTGTGTG	NA	False	NA	-1	True	AATAAA	-12	NA	50022192	50062849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
Isoform_203947_70	chrX	+	175	1	Intergenic	novelGene_12138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTCATGTTTATT	NA	False	NA	NA	False	NA	NA	NA	103467554	103467729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_103467600_103467700
Isoform_203948_3	chrX	-	197	1	Intergenic	novelGene_12139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATAGGCACAGCC	9181	False	NA	NA	False	NA	NA	NA	103468963	103468766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_103468800_103469000
Isoform_203950_15	chrX	-	2301	1	FSM	ENSMUSG00000031224.7	ENSMUST00000033575.7	2316	1	15	0	15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGCTTATGTGATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	103900858	103898557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_103898600_103900900
Isoform_203952_3	chrX	+	2819	1	Intergenic	novelGene_12140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGTTGTCATGGTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	104131294	104134113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_104131300_104134100
Isoform_203955_11	chrX	+	3577	1	FSM	ENSMUSG00000031227.9	ENSMUST00000033578.7	3550	1	5	-32	5	32	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATAATGGGCACAGTAG	NA	False	NA	NA	False	AATAAA	-18	NA	104163988	104167565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_104164000_104167600
Isoform_203956_16	chrX	+	183	1	Intergenic	novelGene_12141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAAAGTATGTCTC	NA	False	NA	NA	False	NA	NA	NA	104194707	104194890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_104194700_104194900
Isoform_203959_3	chr12	+	173	1	FSM	ENSMUSG00000062582.7	ENSMUST00000076166.7	345	1	209	-37	209	37	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTCCTTTTGGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	99013697	99013870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_99013700_99013900
Isoform_203967_10	chrX	+	213	1	Intergenic	novelGene_12142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATATGAGATAGTAGGTA	NA	False	NA	NA	False	AATAAA	-8	NA	104931645	104931858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_104931600_104931900
Isoform_203970_9	chrX	+	184	1	Intergenic	novelGene_12143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATTCTAATAC	NA	False	NA	NA	False	NA	NA	NA	104942610	104942794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_104942600_104942800
Isoform_203972_3	chrX	+	172	1	Intergenic	novelGene_12144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAAGTGAGCAGGGACT	NA	False	NA	NA	False	NA	NA	NA	104958287	104958459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_104958300_104958500
Isoform_203973_5	chrX	+	3306	1	Intergenic	novelGene_12145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGGGGTCAGGGATTT	NA	False	NA	NA	False	NA	NA	NA	104960792	104964098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_104960800_104964100
Isoform_203975_18	chrX	-	167	1	Intergenic	novelGene_12146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGATGTCATTTC	NA	False	NA	NA	False	NA	NA	NA	104989244	104989077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_104989100_104989200
Isoform_203977_3	chrX	-	176	1	Intergenic	novelGene_12147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGTCACACACACAT	NA	False	NA	NA	False	NA	NA	NA	105001538	105001362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_105001400_105001500
Isoform_203978_5	chrX	-	175	1	Intergenic	novelGene_12148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	105003488	105003313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_105003300_105003500
Isoform_203982_21	chrX	-	178	1	Intergenic	novelGene_12149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAGATCC	NA	False	NA	NA	False	NA	NA	NA	105016653	105016475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_105016500_105016700
Isoform_203987_67	chrX	+	171	1	Intergenic	novelGene_12151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAAGACACACAGTAA	NA	False	NA	NA	False	NA	NA	NA	105061345	105061516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_105061300_105061500
Isoform_203988_135	chr3	-	183	1	Intergenic	novelGene_7316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAATAATCTT	8883	False	NA	NA	False	NA	NA	NA	123026086	123025903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_123025900_123026100
Isoform_203990_23	chrX	+	176	1	Intergenic	novelGene_12153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGATTATATTTG	1474	False	NA	NA	False	NA	NA	NA	105081693	105081869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_105081700_105081900
Isoform_203992_7	chrX	+	190	1	Intergenic	novelGene_12154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTCATGCCGGTCGGCC	NA	False	NA	NA	False	NA	NA	NA	105219678	105219868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_105219700_105219900
Isoform_203993_31	chrX	-	176	1	Intergenic	novelGene_12155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACTACCATAATT	NA	False	NA	NA	False	NA	NA	NA	105223840	105223664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_105223700_105223800
Isoform_203996_8	chrX	+	250	1	Intergenic	novelGene_12156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTAGTTGTGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	105648201	105648451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_105648200_105648500
Isoform_203998_3	chrX	-	196	1	Intergenic	novelGene_12157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAAGTTCCAT	1473	False	NA	NA	False	NA	NA	NA	106010409	106010213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_106010200_106010400
Isoform_203999_11	chr4	-	175	1	Intergenic	novelGene_7857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATGAA	9254	False	NA	NA	False	NA	NA	NA	123604573	123604398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_123604400_123604600
Isoform_204_11	ERCC-00170	+	1005	1	FSM	ERCC-00170A	DQ516773	1007	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	1006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00170_+_0_1000
Isoform_2040_6	chr10	-	2381	13	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	9287	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_12	17.736497211494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42344989	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42344818
Isoform_204000_3	chrX	-	4277	1	ISM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	91983	1073	91975	-1073	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTTGCACTCTCGCTG	NA	False	NA	-15	True	AATAAA	-17	NA	107785971	107781694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_107781700_107786000
Isoform_204001_3	chrX	-	5252	1	ISM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	91007	1074	90999	-1074	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCAGTTGCACTCTCGCT	NA	False	NA	-16	True	AATAAA	-16	NA	107786947	107781695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_107781700_107786900
Isoform_204002_7	chrX	+	178	1	Intergenic	novelGene_12158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGAAGTGCAGGA	NA	False	NA	NA	False	NA	NA	NA	107995269	107995447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_107995300_107995400
Isoform_204003_11	chr11	-	173	1	Intergenic	novelGene_1954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	2877	False	NA	NA	False	NA	NA	NA	86990933	86990760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86990800_86990900
Isoform_204006_9	chrX	+	180	1	Intergenic	novelGene_12159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110212756	110212936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_110212800_110212900
Isoform_204007_4	chrX	-	208	1	Intergenic	novelGene_12160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATGGTTATTTCATGA	NA	False	NA	NA	False	NA	NA	NA	110291734	110291526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_110291500_110291700
Isoform_204008_3	chrX	+	225	1	Intergenic	novelGene_12161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTGGAGTAAG	NA	False	NA	NA	False	NA	NA	NA	110548070	110548295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_110548100_110548300
Isoform_20401_19	chr11	+	2327	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	24	-1209	24	1209	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCCGTGTGTACTCGT	NA	False	NA	NA	False	ATTAAA	-14	NA	50065699	50092151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
Isoform_204010_3	chrX	-	177	1	Intergenic	novelGene_12162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	111661334	111661157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_111661200_111661300
Isoform_204011_4	chr2	-	171	1	Intergenic	novelGene_6403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGTGTGCG	NA	False	NA	NA	False	NA	NA	NA	91070766	91070595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_91070600_91070800
Isoform_204018_8	chrX	+	1275	1	Intergenic	novelGene_12163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112067069	112068344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_112067100_112068300
Isoform_20402_184	chr11	+	1140	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	2	0	2	0	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCTTGCTGCTACACTC	NA	False	NA	7	True	AATAAA	-17	NA	50065677	50090942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
Isoform_204024_6096	chrX	-	5165	1	Intergenic	novelGene_12164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6096	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116231724	116226559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_116226600_116231700
Isoform_20403_10	chr11	+	2174	15	NIC	ENSMUSG00000036620.15	novel	1725	12	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_1	52.5656052675403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50101707	50125930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50101858_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
Isoform_204047_4	chrX	-	179	1	Intergenic	novelGene_12165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATTAAGTACT	NA	False	NA	NA	False	NA	NA	NA	117161084	117160905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_117160900_117161100
Isoform_204049_16	chrX	+	182	1	Intergenic	novelGene_12166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTACAGGA	NA	False	NA	NA	False	NA	NA	NA	117370131	117370313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_117370100_117370300
Isoform_20405_495	chr11	+	2423	15	FSM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	6	0	6	0	multi-exon	FALSE	canonical	3	193	junction_14	11.6647471695966	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116167	50125930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
Isoform_204051_3	chrX	-	3432	1	Intergenic	novelGene_12167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118424119	118420687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_118420700_118424100
Isoform_204052_35	chrX	+	191	1	Intergenic	novelGene_11854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACTAGCACCAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	12187275	12187466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_12187300_12187500
Isoform_204053_3	chrX	-	294	1	Intergenic	novelGene_12168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTTTGTATTTGTT	NA	False	NA	NA	False	AATAAA	-34	NA	119985646	119985352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_119985400_119985600
Isoform_204054_4	chrX	-	780	1	Intergenic	novelGene_12169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAACCAGGTATGAAT	NA	False	NA	NA	False	NA	NA	NA	120244423	120243643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_120243600_120244400
Isoform_204055_20	chrX	-	2846	1	FSM	ENSMUSG00000055733.7	ENSMUST00000079490.6	2837	1	-6	-3	-6	3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTACCATTTTCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	121307104	121304258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_121304300_121307100
Isoform_204056_272	chr9	+	176	1	Intergenic	novelGene_11216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACAGTA	NA	False	NA	NA	False	NA	NA	NA	44196733	44196909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_44196700_44196900
Isoform_204058_3	chrX	-	712	1	Intergenic	novelGene_12170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	122059551	122058839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_122058800_122059600
Isoform_204059_6	chrX	-	1452	2	Intergenic	novelGene_12172	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	125444549	125443054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_125443159_125443201
Isoform_204063_29	chr18	+	178	1	Intergenic	novelGene_5401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	38670821	38670999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_38670800_38671000
Isoform_204067_3	chrX	+	156	1	Intergenic	novelGene_12174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATAAATAAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	128587240	128587396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_128587200_128587400
Isoform_204070_233	chrX	-	188	1	Intergenic	novelGene_12175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATACAAGCATACAG	NA	False	NA	NA	False	NA	NA	NA	128660520	128660332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_128660300_128660500
Isoform_204071_51	chr5	-	157	1	Intergenic	novelGene_8579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77417263	77417106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_77417100_77417300
Isoform_204072_70	chrX	-	3505	1	Intergenic	novelGene_12176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128834825	128831320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_128831300_128834800
Isoform_204073_48	chrX	-	248	1	Intergenic	novelGene_12177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTCCCTAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	128876396	128876148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_128876100_128876400
Isoform_204075_5	chrX	-	276	1	Intergenic	novelGene_12178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACATGGTGATGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	129067986	129067710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_129067700_129068000
Isoform_204076_410	chrX	-	175	1	Intergenic	novelGene_12179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	129068218	129068043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_129068000_129068200
Isoform_204077_10	chrX	-	4603	1	Intergenic	novelGene_12180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129352827	129348224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_129348200_129352800
Isoform_204081_3	chrX	-	178	1	Intergenic	novelGene_12181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGATACAC	NA	False	NA	NA	False	NA	NA	NA	129440333	129440155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_129440200_129440300
Isoform_204082_7	chrX	+	193	1	Intergenic	novelGene_12182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAATGACACATC	NA	False	NA	NA	False	NA	NA	NA	129455712	129455905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_129455700_129455900
Isoform_204084_7	chrX	+	177	1	Intergenic	novelGene_12183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	130781352	130781529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_130781400_130781500
Isoform_204085_11	chrX	-	3241	1	ISM	ENSMUSG00000051323.17	ENSMUST00000149154.8	10289	6	102871	16	1895	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTTGGTGAAATGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	132486865	132483624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_-_132483600_132486900
Isoform_20409_29	chr11	+	2515	14	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	193	junction_13	11.5957551915146	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116164	50125930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50116567_50121506_50121693_50121787_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
Isoform_204091_100	chrX	+	177	1	Intergenic	novelGene_12185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	133053555	133053732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_133053600_133053700
Isoform_204094_115	chrX	+	182	1	Intergenic	novelGene_12186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133206913	133207095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_133206900_133207100
Isoform_204095_7	chrX	+	3252	1	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	-9	1147	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133208894	133212146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_133208900_133212100
Isoform_204096_29	chrX	-	1208	1	Antisense	novelGene_ENSMUSG00000031262.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133225511	133224303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_-_133224300_133225500
Isoform_204098_3	chrX	-	178	1	Intergenic	novelGene_12187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATCTAAAAGACGCA	NA	False	NA	NA	False	NA	NA	NA	133381887	133381709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_133381700_133381900
Isoform_2041_14	chr10	-	2331	13	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	9300	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	15.99717857068	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42344976	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42344855
Isoform_20410_15	chr11	+	2145	14	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_11	142.282700508197	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268595	50277354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
Isoform_204100_208	chrX	-	181	1	Intergenic	novelGene_12188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATAAAAGACCTTCG	NA	False	NA	NA	False	NA	NA	NA	133448989	133448808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_133448800_133449000
Isoform_204101_24	chrX	-	176	1	Intergenic	novelGene_12189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGAGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	133476128	133475952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_133476000_133476100
Isoform_204103_3	chrX	+	240	1	Intergenic	novelGene_12190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGGAAAAAAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	133494003	133494243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_133494000_133494200
Isoform_20411_10	chr11	+	2208	14	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_11	142.282700508197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268532	50277354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
Isoform_204127_14	chrX	-	176	1	Intergenic	novelGene_12191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	133665456	133665280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_133665300_133665500
Isoform_20413_176	chr11	+	2177	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	49	-1	-1	0	multi-exon	FALSE	canonical	3	130	junction_1	115.462537790991	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268594	50277355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
Isoform_204131_13	chrX	-	172	1	Intergenic	novelGene_11855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	12422091	12421919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_12421900_12422100
Isoform_204132_4	chrX	-	179	1	Intergenic	novelGene_12192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGTGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	134636827	134636648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_134636600_134636800
Isoform_20414_51	chr11	+	2239	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	-13	-1	-13	0	multi-exon	FALSE	canonical	3	130	junction_1	115.462537790991	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268532	50277355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
Isoform_204153_253	chrX	+	1533	1	FSM	ENSMUSG00000048040.9	ENSMUST00000058119.9	1532	1	-4	3	-4	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGTAGGTCCATTA	NA	False	NA	17	True	AATAAA	-14	NA	134894568	134896101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134894600_134896100
Isoform_204157_4	chrX	+	1874	1	FSM	ENSMUSG00000048355.3	ENSMUST00000057625.3	1580	1	-295	1	-295	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTTTGCTTCCTTTA	NA	False	NA	21	True	AATAGA	-15	NA	134933820	134935694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134933800_134935700
Isoform_204158_135	chrX	+	1580	1	FSM	ENSMUSG00000048355.3	ENSMUST00000057625.3	1580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTTGCTTCCTTTAT	NA	False	NA	22	True	AATAGA	-16	NA	134934115	134935695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_134934100_134935700
Isoform_20416_7	chr11	+	2124	13	FSM	ENSMUSG00000007850.17	ENSMUST00000077817.8	2126	13	0	2	0	-1	multi-exon	FALSE	canonical	3	24	junction_12	133.956356906104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268595	50277353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50276603
Isoform_204161_20	chrX	-	174	1	Intergenic	novelGene_12194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGACAA	3034	False	NA	NA	False	NA	NA	NA	135022291	135022117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_135022100_135022300
Isoform_204162_6	chrX	-	172	1	Intergenic	novelGene_12195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTAAAAATTGGGATAA	4773	False	NA	NA	False	NA	NA	NA	135031322	135031150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_135031200_135031300
Isoform_204168_13	chrX	+	177	1	Intergenic	novelGene_12196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGAGGTGAGT	NA	False	NA	NA	False	NA	NA	NA	135054225	135054402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_135054200_135054400
Isoform_204169_4	chrX	+	166	1	Intergenic	novelGene_12197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTAAAATAATCATTT	NA	False	NA	NA	False	NA	NA	NA	135061575	135061741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_135061600_135061700
Isoform_204177_6	chrX	-	175	1	Intergenic	novelGene_12198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAAGACAC	NA	False	NA	NA	False	NA	NA	NA	135127378	135127203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_135127200_135127400
Isoform_20418_5	chr11	+	2177	13	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	144.892752483422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268532	50277353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
Isoform_204184_12	chrX	+	177	1	Intergenic	novelGene_12199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	135160285	135160462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_135160300_135160500
Isoform_204191_6	chrX	+	260	1	Antisense	novelGene_ENSMUSG00000031422.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAAATGCATGGGTTTCC	NA	False	NA	NA	False	CATAAA	-11	NA	135633705	135633965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_+_135633700_135634000
Isoform_2042_3	chr10	-	2410	13	NNC	ENSMUSG00000038302.15	novel	2552	14	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.0020101275862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGAGCTTGTCTGATTC	NA	False	NA	-2	True	AATAAA	-15	NA	42354236	42188583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354033
Isoform_20420_9	chr11	+	2075	13	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	143.551457092338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268556	50277354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
Isoform_204206_4	chrX	+	1315	1	NIC	ENSMUSG00000087368.8	novel	697	5	NA	NA	5	-1444	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135642577	135643892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_135642600_135643900
Isoform_204207_7	chrX	+	1061	1	FSM	ENSMUSG00000048155.5	ENSMUST00000059808.5	1052	1	-12	3	-12	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGTTTCTGCTAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	135828061	135829122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_135828100_135829100
Isoform_204209_58	chrX	+	175	1	Intergenic	novelGene_12200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAGAATTGTCGGT	NA	False	NA	NA	False	NA	NA	NA	135920929	135921104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_135920900_135921100
Isoform_20421_7	chr11	+	4699	12	FSM	ENSMUSG00000007850.17	ENSMUST00000123371.8	4002	12	-90	-607	-40	0	multi-exon	TRUE	canonical	3	130	junction_1	114.133747843021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268505	50277355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
Isoform_204210_34	chrX	-	176	1	Intergenic	novelGene_12201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	135921911	135921735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_135921700_135921900
Isoform_204213_13	chrX	-	176	1	Intergenic	novelGene_12202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	136075154	136074978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_136075000_136075200
Isoform_204217_11	chrX	-	3711	1	FSM	ENSMUSG00000046269.18	ENSMUST00000115744.2	3240	1	-474	3	-474	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGAATTTTATTTGGA	NA	False	NA	NA	False	NA	NA	NA	7242543	7238832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_7238800_7242500
Isoform_204221_4	chrX	-	184	1	Intergenic	novelGene_11856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATACATTAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	12501226	12501042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_12501000_12501200
Isoform_204222_4	chrX	-	162	1	Intergenic	novelGene_12206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	138377178	138377016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_138377000_138377200
Isoform_204225_13	chrX	+	175	1	Intergenic	novelGene_12207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACACAACTTTT	NA	False	NA	NA	False	NA	NA	NA	139348179	139348354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_139348200_139348400
Isoform_204234_11	chrX	-	177	1	Intergenic	novelGene_12208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATCTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	139385302	139385125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_139385100_139385300
Isoform_204236_59	chrX	+	195	1	Intergenic	novelGene_11857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATACACTGGGACTCAC	NA	False	NA	NA	False	NA	NA	NA	12513532	12513727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_12513500_12513700
Isoform_204237_13	chrX	+	203	1	Intergenic	novelGene_12209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTAGCTTCTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	139410454	139410657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_139410500_139410700
Isoform_204239_3	chrX	-	230	1	Intergenic	novelGene_12210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGACGTTATAAGTG	NA	False	NA	NA	False	AAGAAA	-10	NA	139464373	139464143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_139464100_139464400
Isoform_204240_18	chrX	-	180	1	Intergenic	novelGene_12211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGCTATGTGCCAT	NA	False	NA	NA	False	NA	NA	NA	139657826	139657646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_139657600_139657800
Isoform_204242_7	chrX	+	152	1	Intergenic	novelGene_12212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGGGAACAAAATACCC	NA	False	NA	NA	False	AATAAA	-27	NA	141082091	141082243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_141082100_141082200
Isoform_204247_99	chrX	-	174	1	Intergenic	novelGene_12213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTTAAAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	141254669	141254495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_141254500_141254700
Isoform_204249_3	chrX	+	770	1	FSM	ENSMUSG00000079871.5	ENSMUST00000115987.3	360	1	-248	-162	-248	162	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGAGTGTTGCCTGTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	12518293	12519063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_12518300_12519100
Isoform_204250_14	chrX	+	611	1	FSM	ENSMUSG00000079871.5	ENSMUST00000115987.3	360	1	-94	-157	-94	157	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATATTGAGTGTTGCC	NA	False	NA	NA	False	ATTAAA	-15	NA	12518447	12519058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_12518400_12519100
Isoform_204251_6	chrX	-	178	1	Intergenic	novelGene_12214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATTCCCATCTTCA	NA	False	NA	NA	False	NA	NA	NA	141577961	141577783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_141577800_141578000
Isoform_204259_19	chrX	+	175	1	Intergenic	novelGene_11858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTTAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	12533642	12533817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_12533600_12533800
Isoform_204261_4	chrX	+	170	1	Intergenic	novelGene_12215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	143026557	143026727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_143026600_143026700
Isoform_204262_4	chrX	-	175	1	Intergenic	novelGene_12216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAGGAGGAAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	143029802	143029627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_143029600_143029800
Isoform_204263_20	chrX	+	178	1	Intergenic	novelGene_12217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATTATGAAA	NA	False	NA	NA	False	NA	NA	NA	143030337	143030515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_143030300_143030500
Isoform_204264_6	chrX	+	182	1	Intergenic	novelGene_12218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAACCTGGAAGATGAC	NA	False	NA	NA	False	NA	NA	NA	143032344	143032526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_143032300_143032500
Isoform_204265_13	chrX	-	171	1	Intergenic	novelGene_12219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	143052684	143052513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_143052500_143052700
Isoform_204266_6	chrX	+	151	1	Intergenic	novelGene_12220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACATTTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	143054874	143055025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_143054900_143055000
Isoform_204267_17	chrX	+	176	1	Antisense	novelGene_ENSMUSG00000083200.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAGGTAATGATAG	NA	False	NA	NA	False	NA	NA	NA	143069711	143069887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_+_143069700_143069900
Isoform_204269_14	chrX	-	179	1	Intergenic	novelGene_12222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	143076698	143076519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_143076500_143076700
Isoform_204270_54	chrX	-	168	1	Intergenic	novelGene_12223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTTAAAAGATAAGGAA	NA	False	NA	NA	False	NA	NA	NA	143093071	143092903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_143092900_143093100
Isoform_204277_62	chrX	+	180	1	Intergenic	novelGene_12224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAGAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	143271723	143271903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_143271700_143271900
Isoform_204278_19	chrX	+	176	1	Intergenic	novelGene_12225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAGAGATGCCT	8619	False	NA	NA	False	NA	NA	NA	144162359	144162535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_144162400_144162500
Isoform_204280_7	chrX	-	191	1	Intergenic	novelGene_12226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCCCTTTGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145130574	145130383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_145130400_145130600
Isoform_204281_3	chrX	-	1881	1	Intergenic	novelGene_12227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAACATGTT	NA	False	NA	NA	False	AATAAA	-16	NA	147018934	147017053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_147017100_147018900
Isoform_204282_5	chrX	-	1945	1	Intergenic	novelGene_12228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAACAAAACATGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	148880275	148878330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_148878300_148880300
Isoform_204283_17	chrX	+	5059	1	Intergenic	novelGene_12231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGTTTTAGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	148930495	148935554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_148930500_148935600
Isoform_204284_89	chrX	+	174	1	Intergenic	novelGene_12233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAACACACAAGCCC	NA	False	NA	NA	False	NA	NA	NA	149361763	149361937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_149361800_149361900
Isoform_204287_140	chrX	-	177	1	Intergenic	novelGene_11859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAACATGAGCTC	NA	False	NA	NA	False	NA	NA	NA	12595201	12595024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_12595000_12595200
Isoform_204288_3	chrX	+	177	1	Intergenic	novelGene_12235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAGGTAAATTGA	NA	False	NA	NA	False	NA	NA	NA	149703184	149703361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_149703200_149703400
Isoform_204297_3	chrX	+	183	1	Intergenic	novelGene_12236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAAATCTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	149803341	149803524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_149803300_149803500
Isoform_204298_5	chrX	+	184	1	Intergenic	novelGene_12023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGGTCAAAAGA	NA	False	NA	NA	False	NA	NA	NA	74100551	74100735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_74100600_74100700
Isoform_204299_12	chrX	-	209	1	Intergenic	novelGene_12237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTTACATGACATATGA	NA	False	NA	NA	False	NA	NA	NA	149823105	149822896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_149822900_149823100
Isoform_2043_3	chr10	-	2154	12	NIC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	19.5376305693516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42354426	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42354258
Isoform_204306_15	chrX	+	201	1	Intergenic	novelGene_12238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACAGCATGCAAT	NA	False	NA	NA	False	AATGAA	-6	NA	149877297	149877498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_149877300_149877500
Isoform_204308_31	chrX	+	179	1	Intergenic	novelGene_12117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTCTTGGGAAG	NA	False	NA	NA	False	NA	NA	NA	102288017	102288196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102288000_102288200
Isoform_204312_8	chrX	-	177	1	Intergenic	novelGene_12240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGGGGGCTGGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	149997192	149997015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_149997000_149997200
Isoform_204314_294	chrX	-	555	1	FSM	ENSMUSG00000083596.5	ENSMUST00000121545.2	483	1	-39	-33	-39	33	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTCCCAGAGA	NA	False	NA	NA	False	AATAAA	-16	NA	149998684	149998129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_149998100_149998700
Isoform_204315_6	chr12	-	385	2	NNC	ENSMUSG00000113555.2	novel	483	2	NA	NA	-41	-139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGGAAGCCAAAGAGA	3740	False	NA	NA	False	NA	NA	NA	86893282	86892690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_86892976_86893182
Isoform_204316_3	chrX	-	339	1	Intergenic	novelGene_12241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAACA	NA	False	NA	NA	False	AAGAAA	-22	NA	150012447	150012108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_150012100_150012400
Isoform_204319_7	chrX	+	1463	1	Genic_Genomic	ENSMUSG00000025262.9	novel	NA	NA	NA	NA	-309	-126514	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTGTTCTATAATTT	NA	False	NA	15	True	AATAAA	-16	NA	150126861	150128324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_150126900_150128300
Isoform_204320_9	chrX	+	1171	1	Genic_Genomic	ENSMUSG00000025262.9	novel	NA	NA	NA	NA	-16	-126513	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGTTCTATAATTTT	NA	False	NA	16	True	AATAAA	-17	NA	150127154	150128325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_150127200_150128300
Isoform_204321_6	chrX	+	3864	1	Genic_Genomic	ENSMUSG00000025262.9	novel	NA	NA	NA	NA	-15	-123819	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAGCAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	150127155	150131019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_150127200_150131000
Isoform_204322_6	chrX	-	198	1	Intergenic	novelGene_12242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAATGAAATTTG	NA	False	NA	NA	False	NA	NA	NA	150185689	150185491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_150185500_150185700
Isoform_204323_5	chrX	+	208	1	Intergenic	novelGene_12243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTAGGGTCCCAAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	150249523	150249731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_150249500_150249700
Isoform_204324_5	chrX	+	221	1	Intergenic	novelGene_12244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	150407508	150407729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_150407500_150407700
Isoform_204325_35	chrX	-	157	1	Intergenic	novelGene_12245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	150481413	150481256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_150481300_150481400
Isoform_204327_62	chr4	+	177	1	Intergenic	novelGene_7999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAGAT	NA	False	NA	NA	False	NA	NA	NA	132685519	132685696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132685500_132685700
Isoform_204328_6	chrX	+	163	1	Intergenic	novelGene_11860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTCAAAAAAACAAGAAACC	923	False	NA	NA	False	NA	NA	NA	12674205	12674368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_12674200_12674400
Isoform_204331_13	chrX	+	173	1	Intergenic	novelGene_12246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAGAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	150923599	150923772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_150923600_150923800
Isoform_204332_127	chrX	+	180	1	Intergenic	novelGene_12247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	150958991	150959171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_150959000_150959200
Isoform_204334_15	chrX	-	1389	1	Intergenic	novelGene_12248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-6	NA	151035662	151034273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_151034300_151035700
Isoform_204338_4	chrX	-	2353	1	Antisense	novelGene_ENSMUSG00000025332.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCTAAGGGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	151059218	151056865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_-_151056900_151059200
Isoform_204340_17	chrX	+	177	1	Intergenic	novelGene_12249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGC	NA	False	NA	NA	False	NA	NA	NA	151064310	151064487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_151064300_151064500
Isoform_204341_7	chrX	-	181	1	Intergenic	novelGene_12250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAAAGTATTCTCA	NA	False	NA	NA	False	NA	NA	NA	151097400	151097219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_151097200_151097400
Isoform_204342_10	chrX	+	157	1	Antisense	novelGene_ENSMUSG00000087403.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	151102756	151102913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_+_151102800_151102900
Isoform_204343_62	chrX	+	177	1	Intergenic	novelGene_12251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGTAGCTACATCTTA	NA	False	NA	NA	False	NA	NA	NA	151112614	151112791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_151112600_151112800
Isoform_204344_16	chrX	+	158	1	Intergenic	novelGene_11861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	12715049	12715207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_12715000_12715200
Isoform_204345_31	chrX	-	174	1	Intergenic	novelGene_12252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATTGAACCCA	NA	False	NA	NA	False	NA	NA	NA	151154961	151154787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_151154800_151155000
Isoform_204346_4	chrX	-	173	1	Intergenic	novelGene_12253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAAGAAGAGTGC	NA	False	NA	NA	False	NA	NA	NA	151169449	151169276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_151169300_151169400
Isoform_204347_11	chrX	-	174	1	Intergenic	novelGene_12254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATAATC	NA	False	NA	NA	False	NA	NA	NA	151174522	151174348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_151174300_151174500
Isoform_204348_87	chrX	-	175	1	Intergenic	novelGene_12255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTAGTACATAA	NA	False	NA	NA	False	NA	NA	NA	151365801	151365626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_151365600_151365800
Isoform_204355_20	chrX	+	178	1	Intergenic	novelGene_12256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGGCAGA	NA	False	NA	NA	False	NA	NA	NA	151539640	151539818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_151539600_151539800
Isoform_204356_64	chrX	-	199	1	Intergenic	novelGene_12257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAACATAG	NA	False	NA	NA	False	NA	NA	NA	151592110	151591911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_151591900_151592100
Isoform_204362_34	chrX	-	528	1	FSM	ENSMUSG00000095597.3	ENSMUST00000187973.2	582	1	90	-36	90	2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	151693026	151692498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151692500_151693000
Isoform_204363_32	chr19	+	573	1	FSM	ENSMUSG00000044424.5	ENSMUST00000104916.4	571	1	32	-34	32	34	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	23597144	23597717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_23597100_23597700
Isoform_204366_64	chrX	-	1392	1	FSM	ENSMUSG00000047238.5	ENSMUST00000051484.5	1410	1	11	7	11	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAATGTTTTGTTCATT	NA	False	NA	NA	False	AATAAA	-10	NA	151820560	151819168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_151819200_151820600
Isoform_204370_7	chrX	-	175	1	Intergenic	novelGene_11818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATTAAGGGA	3683	False	NA	NA	False	NA	NA	NA	7315628	7315453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_7315500_7315600
Isoform_204371_226	chr5	+	176	1	FSM	ENSMUSG00000105613.2	ENSMUST00000199279.2	6573	1	3136	3261	3136	-3261	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCTATAATTT	NA	False	NA	NA	False	NA	NA	NA	122920723	122920899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_122920700_122920900
Isoform_204372_17	chrX	-	186	1	Intergenic	novelGene_12258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151885277	151885091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_151885100_151885300
Isoform_204373_9	chrX	+	209	1	Intergenic	novelGene_12259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCTGTGAGACAGTGG	839	False	NA	NA	False	NA	NA	NA	151935267	151935476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_151935300_151935500
Isoform_204376_24	chrX	-	223	1	Intergenic	novelGene_12260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTATGTTAATTT	NA	False	NA	NA	False	AAAAAG	-23	NA	151994161	151993938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_151993900_151994200
Isoform_204377_38	chrX	-	175	1	Intergenic	novelGene_12261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGAGAGAGGGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	152002020	152001845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_152001800_152002000
Isoform_204379_4	chrX	-	173	1	Intergenic	novelGene_12262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAGTTTTGAAAAAA	8115	False	NA	NA	False	NA	NA	NA	152008232	152008059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_152008100_152008200
Isoform_204380_6	chrX	+	175	1	Intergenic	novelGene_11863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCCAAGA	NA	False	NA	NA	False	NA	NA	NA	12747675	12747850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_12747700_12747800
Isoform_204382_5	chrX	-	210	1	Intergenic	novelGene_12263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGTAAACAACA	NA	False	NA	NA	False	NA	NA	NA	152147042	152146832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_152146800_152147000
Isoform_204384_3	chrX	+	2344	1	Intergenic	novelGene_12264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACCGTGGGTTTTGTGT	514	False	NA	13	True	AATAAA	-14	NA	152179572	152181916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_152179600_152181900
Isoform_204385_126	chrX	-	177	1	Intergenic	novelGene_11864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	12749669	12749492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_12749500_12749700
Isoform_204386_101	chrX	+	3423	1	FSM	ENSMUSG00000050148.10	ENSMUST00000060714.10	3344	1	-83	4	-83	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTCTTTTATTTTGCC	7249	False	NA	9	True	ATTAAA	-36	NA	152281139	152284562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_152281100_152284600
Isoform_204387_236	chrX	+	3353	1	FSM	ENSMUSG00000050148.10	ENSMUST00000060714.10	3344	1	-13	4	-13	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTCTTTTATTTTGCC	7319	False	NA	9	True	ATTAAA	-36	NA	152281209	152284562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_152281200_152284600
Isoform_204393_8	chrX	-	152	1	Intergenic	novelGene_12265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATTAAAAAAAAA	7087	False	NA	NA	False	NA	NA	NA	152320373	152320221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_152320200_152320400
Isoform_204396_3	chrX	+	186	1	Intergenic	novelGene_11865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAAAGCAAGGATCCTG	NA	False	NA	NA	False	NA	NA	NA	12752187	12752373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_12752200_12752400
Isoform_204397_9	chrX	-	176	1	Intergenic	novelGene_12266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATAAAAGAGTTG	7255	False	NA	NA	False	NA	NA	NA	152916505	152916329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_152916300_152916500
Isoform_204398_5	chrX	-	179	1	Intergenic	novelGene_12267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAGAGAAA	5893	False	NA	NA	False	NA	NA	NA	153256984	153256805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_153256800_153257000
Isoform_204399_8	chrX	+	177	1	Intergenic	novelGene_12268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATAGATTCG	NA	False	NA	NA	False	NA	NA	NA	153825074	153825251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_153825100_153825300
Isoform_2044_17	chr10	-	2241	12	NIC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_10	11.696577164084	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42354341	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42354258
Isoform_204402_3	chrX	-	207	2	Intergenic	novelGene_12269	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGCTAAGCTGTAACT	NA	False	NA	NA	False	NA	NA	NA	154021562	154021320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_154021330_154021364
Isoform_204404_68	chrX	-	185	1	Intergenic	novelGene_12270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTATTTTGCATGA	NA	False	NA	NA	False	NA	NA	NA	154089856	154089671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_154089700_154089900
Isoform_204406_3	chrX	-	162	1	Intergenic	novelGene_12271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAAACAAGATTTAGA	NA	False	NA	NA	False	NA	NA	NA	154132834	154132672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_154132700_154132800
Isoform_204407_177	chrX	-	177	1	Intergenic	novelGene_12272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154953308	154953131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_154953100_154953300
Isoform_204408_93	chrX	-	177	1	Intergenic	novelGene_12273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACAGCATCT	NA	False	NA	NA	False	NA	NA	NA	155253653	155253476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_155253500_155253700
Isoform_204409_3	chrX	-	214	1	Intergenic	novelGene_12274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTGTTGAAACATA	NA	False	NA	NA	False	ATTAAA	-6	NA	155309330	155309116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_155309100_155309300
Isoform_204411_16	chrX	-	176	1	Intergenic	novelGene_12275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGAATTTTGA	NA	False	NA	NA	False	NA	NA	NA	156218945	156218769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_156218800_156218900
Isoform_204412_4	chrX	-	176	1	Intergenic	novelGene_12276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTGAACTGAA	NA	False	NA	NA	False	NA	NA	NA	156221947	156221771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_156221800_156221900
Isoform_204413_20	chrX	-	168	1	Intergenic	novelGene_11866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGTAAGTAAGTAA	NA	False	NA	NA	False	NA	NA	NA	12797447	12797279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_12797300_12797400
Isoform_204414_6	chrX	-	2868	1	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	0	-23313	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAACA	NA	False	NA	NA	False	AAAAAG	-14	NA	156275040	156272172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_156272200_156275000
Isoform_204420_4	chrX	+	1283	1	Intergenic	novelGene_12277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156344991	156346274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_156345000_156346300
Isoform_204421_37	chrX	-	2865	1	FSM	ENSMUSG00000091736.4	ENSMUST00000065806.5	2867	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGCTTGCTTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	156351979	156349114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_156349100_156352000
Isoform_204422_11	chrX	+	1899	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	-235	-407	-235	407	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGAGTTTTTTGGTCTCT	NA	False	NA	3	True	AATAAA	-28	NA	12802875	12804774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_12802900_12804800
Isoform_204423_59	chrX	+	1667	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	-2	-408	-2	408	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTTTTTTGGTCTCTG	NA	False	NA	4	True	AATAAA	-29	NA	12803108	12804775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_12803100_12804800
Isoform_204427_5	chrX	+	174	1	Intergenic	novelGene_12278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGACATTTGTAC	NA	False	NA	NA	False	NA	NA	NA	156365313	156365487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_156365300_156365500
Isoform_204428_30	chrX	-	176	1	Intergenic	novelGene_12279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	156382335	156382159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_156382200_156382300
Isoform_204429_60	chrX	-	157	1	Intergenic	novelGene_12280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAGAAACAAATTTCA	NA	False	NA	NA	False	NA	NA	NA	156387336	156387179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_156387200_156387300
Isoform_204432_6	chrX	+	3482	1	FSM	ENSMUSG00000047485.7	ENSMUST00000087157.5	1935	1	-488	-1059	-488	1059	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATTAAGAGCTGGATTT	NA	False	NA	NA	False	AATAAA	-18	NA	156600942	156604424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_156600900_156604400
Isoform_204434_13	chrX	+	169	1	Intergenic	novelGene_12281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGAGTGGTAGG	NA	False	NA	NA	False	NA	NA	NA	156785333	156785502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_156785300_156785500
Isoform_204435_3	chrX	+	2194	1	Intergenic	novelGene_12282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGGTCGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	157524498	157526692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_157524500_157526700
Isoform_204436_56	chr18	+	178	1	Intergenic	novelGene_5442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56777317	56777495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_56777300_56777500
Isoform_204437_3	chrX	+	176	1	Intergenic	novelGene_12284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATAG	NA	False	NA	NA	False	NA	NA	NA	158057141	158057317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_158057100_158057300
Isoform_204438_7	chrX	-	171	1	Intergenic	novelGene_12285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTTAAAAAAACAAATAA	NA	False	NA	NA	False	NA	NA	NA	158114693	158114522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_158114500_158114700
Isoform_204439_8	chrX	-	177	1	Intergenic	novelGene_12286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTCTAT	NA	False	NA	NA	False	NA	NA	NA	158141231	158141054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_158141100_158141200
Isoform_204444_37	chrX	-	234	1	Intergenic	novelGene_12287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGCTGGAATCCCAAT	NA	False	NA	NA	False	NA	NA	NA	158189945	158189711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_158189700_158189900
Isoform_204446_3	chr9	+	173	1	Intergenic	novelGene_11195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	37396127	37396300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_37396100_37396300
Isoform_204447_6	chrX	+	191	1	Intergenic	novelGene_12288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATATTTTTATTAGGT	NA	False	NA	NA	False	NA	NA	NA	158219730	158219921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_158219700_158219900
Isoform_204448_66	chrX	+	169	1	Intergenic	novelGene_12289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	158238647	158238816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_158238600_158238800
Isoform_204451_72	chrX	+	176	1	Intergenic	novelGene_12290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGAGTCCATC	NA	False	NA	NA	False	NA	NA	NA	158287231	158287407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_158287200_158287400
Isoform_204452_6	chrX	+	165	1	Intergenic	novelGene_12291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	158298367	158298532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_158298400_158298500
Isoform_204453_3	chrX	-	529	1	Intergenic	novelGene_12292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATAAATCC	NA	False	NA	NA	False	NA	NA	NA	158305341	158304812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_158304800_158305300
Isoform_204455_5	chrX	+	177	1	Intergenic	novelGene_12293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTGTTAATTTCAC	NA	False	NA	NA	False	NA	NA	NA	158306180	158306357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_158306200_158306400
Isoform_204457_4	chrX	-	3670	1	FSM	ENSMUSG00000082693.4	ENSMUST00000120855.2	276	1	-2006	-1388	-2006	1388	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCAAGTAACATATAAAGG	NA	False	NA	NA	False	NA	NA	NA	158370060	158366390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_158366400_158370100
Isoform_204462_46	chrX	+	177	1	Intergenic	novelGene_12294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	158728138	158728315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_158728100_158728300
Isoform_204464_43	chrX	+	177	1	Intergenic	novelGene_11867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAGAAAACC	NA	False	NA	NA	False	NA	NA	NA	12871696	12871873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_12871700_12871900
Isoform_204478_14	chrX	-	168	1	Intergenic	novelGene_12295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAATCAAGATGA	NA	False	NA	NA	False	NA	NA	NA	159056545	159056377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_159056400_159056500
Isoform_204480_7	chrX	-	5476	1	Genic_Genomic	ENSMUSG00000039556.17	novel	NA	NA	NA	NA	-17	-6595	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTTGAGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	7440539	7435063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_-_7435100_7440500
Isoform_204481_15	chr17	+	180	1	Intergenic	novelGene_5084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGGAGTGTATTA	NA	False	NA	NA	False	NA	NA	NA	63820886	63821066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_63820900_63821100
Isoform_204483_8	chrX	-	176	1	Intergenic	novelGene_12296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTGCTAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	159769547	159769371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_159769400_159769500
Isoform_204484_4	chrX	-	181	1	Intergenic	novelGene_12297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGAGTCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	159802430	159802249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_159802200_159802400
Isoform_204488_3	chrX	-	344	1	Intergenic	novelGene_12298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTACTGAC	NA	False	NA	NA	False	NA	NA	NA	161331380	161331036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_161331000_161331400
Isoform_204493_14	chrX	-	175	1	Intergenic	novelGene_12299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGTGAGTGGGGCC	NA	False	NA	NA	False	NA	NA	NA	161388841	161388666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_161388700_161388800
Isoform_204494_58	chrX	+	156	1	Intergenic	novelGene_12300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	161444462	161444618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_161444500_161444600
Isoform_204495_3	chrX	+	171	1	Intergenic	novelGene_12301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	161449969	161450140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_161450000_161450100
Isoform_204497_184	chrX	+	192	1	Intergenic	novelGene_12302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAAGGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	161491683	161491875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_161491700_161491900
Isoform_204498_24	chrX	+	175	1	Intergenic	novelGene_12303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	161503744	161503919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_161503700_161503900
Isoform_2045_8	chr10	-	2307	12	NIC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_10	11.696577164084	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42354407	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42354258
Isoform_204500_48	chrX	-	176	1	Intergenic	novelGene_12304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAATGGAGC	NA	False	NA	NA	False	NA	NA	NA	161527188	161527012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_161527000_161527200
Isoform_204501_30	chr19	+	177	1	Intergenic	novelGene_5850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	45276669	45276846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45276700_45276800
Isoform_204507_4	chrX	+	175	1	Intergenic	novelGene_12306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161593483	161593658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_161593500_161593700
Isoform_204508_7	chrX	+	179	1	Intergenic	novelGene_12307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	161597320	161597499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_161597300_161597500
Isoform_204510_79	chrX	+	177	1	Intergenic	novelGene_12308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAAAGACAATGGAGC	NA	False	NA	NA	False	NA	NA	NA	161618931	161619108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_161618900_161619100
Isoform_204511_5	chrX	-	175	1	Intergenic	novelGene_12309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCATGTGTATGCATGG	NA	False	NA	NA	False	NA	NA	NA	161631083	161630908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_161630900_161631100
Isoform_204512_29	chrX	-	161	1	Intergenic	novelGene_12310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAAGTGCTTGTTTCG	NA	False	NA	0	True	NA	NA	NA	161633753	161633592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_161633600_161633800
Isoform_204513_5	chrX	+	174	1	Intergenic	novelGene_12311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAACAATATA	NA	False	NA	NA	False	NA	NA	NA	161634344	161634518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_161634300_161634500
Isoform_204514_38	chrX	-	206	1	Intergenic	novelGene_12312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGGGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	161635481	161635275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_161635300_161635500
Isoform_204517_6	chrX	-	229	1	Intergenic	novelGene_12313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAGGAGAAAGTAGGGAA	NA	False	NA	NA	False	AAGAAA	-33	NA	161677658	161677429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_161677400_161677700
Isoform_204520_72	chrX	-	173	1	Intergenic	novelGene_12314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGATACAGTGCT	NA	False	NA	NA	False	NA	NA	NA	161718138	161717965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_161718000_161718100
Isoform_204524_4	chrX	-	418	1	Intergenic	novelGene_12315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162691858	162691440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_162691400_162691900
Isoform_204525_3	chrX	+	4257	1	Genic_Genomic	ENSMUSG00000031367.16	novel	NA	NA	NA	NA	14821	932	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATCATGAAAACATCTAG	NA	False	NA	NA	False	NA	NA	NA	162709217	162713474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_162709200_162713500
Isoform_204527_50	chrX	-	1023	1	Intergenic	novelGene_12316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAACAGTATTA	NA	False	NA	NA	False	NA	NA	NA	162836601	162835578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_162835600_162836600
Isoform_204534_5	chrX	+	162	1	Intergenic	novelGene_12317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	163173296	163173458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_163173300_163173500
Isoform_204537_30	chr9	-	184	1	Intergenic	novelGene_11598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99165152	99164968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_99165000_99165200
Isoform_204539_15	chrX	+	176	1	Intergenic	novelGene_11868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGTGACTTTGCT	NA	False	NA	NA	False	NA	NA	NA	13021422	13021598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_13021400_13021600
Isoform_20454_5	chr11	+	5937	6	FSM	ENSMUSG00000061469.4	ENSMUST00000126189.3	1462	6	104	-4579	104	4579	multi-exon	FALSE	canonical	3	10	junction_2	4.24264068711928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGAGCAAGTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	51111403	51130459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51111470_51122618_51122914_51123233_51123435_51124291_51124380_51124877_51125184_51125478
Isoform_204540_19	chrX	-	207	1	Intergenic	novelGene_12319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAAACAAATACATTGAA	NA	False	NA	NA	False	NA	NA	NA	163892428	163892221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_163892200_163892400
Isoform_204541_13	chr5	+	177	1	FSM	ENSMUSG00000036435.14	ENSMUST00000202151.2	2990	1	458	2355	458	-2355	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76700950	76701127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_76701000_76701100
Isoform_204543_43	chrX	+	177	1	Intergenic	novelGene_12320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	165211923	165212100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_165211900_165212100
Isoform_204547_5	chrX	+	3151	1	Intergenic	novelGene_11871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	13056607	13059758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_13056600_13059800
Isoform_204549_6	chrX	+	2073	1	Intergenic	novelGene_11872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	13057685	13059758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_13057700_13059800
Isoform_20455_3	chr11	+	4188	6	FSM	ENSMUSG00000061469.4	ENSMUST00000126189.3	1462	6	64	-2790	64	2790	multi-exon	FALSE	canonical	3	10	junction_2	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCGCTTCAAACCTCTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	51111363	51128670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51111470_51122618_51122914_51123233_51123435_51124291_51124380_51124877_51125184_51125478
Isoform_204553_4	chrX	+	162	1	Intergenic	novelGene_12321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	165272231	165272393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_165272200_165272400
Isoform_204554_8	chrX	+	543	1	Intergenic	novelGene_12322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	165289041	165289584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_165289000_165289600
Isoform_204555_12	chrX	+	789	1	Antisense	novelGene_ENSMUSG00000051224.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAATAAATGGTTGGGT	NA	False	NA	NA	False	AATAAA	-27	NA	165293198	165293987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_+_165293200_165294000
Isoform_204557_3	chrX	-	173	1	Intergenic	novelGene_12323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTAAATTACCATTT	NA	False	NA	NA	False	NA	NA	NA	165338876	165338703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_165338700_165338900
Isoform_20457_7	chr11	+	2009	15	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	60.1503643092094	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTGAGTATTCTTTA	NA	False	NA	18	True	AGTAAA	-18	NA	51153998	51172596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51159595_51159674_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204572_20	chrX	+	201	1	Intergenic	novelGene_12324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATAGATGACTATATTTC	NA	False	NA	NA	False	NA	NA	NA	166955090	166955291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_166955100_166955300
Isoform_204574_3	chrX	+	3847	1	FSM	ENSMUSG00000094574.2	ENSMUST00000120922.2	138	1	129	-3838	129	3838	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATTTGGGTTTTTCTTT	3782	False	NA	NA	False	AATAAA	-11	NA	13045810	13049657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_13045800_13049700
Isoform_20458_10	chr11	+	1963	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-9	4	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	53.6563688406117	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153967	51172597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204586_6	chrX	+	165	1	Intergenic	novelGene_11870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAGTACACATA	NA	False	NA	NA	False	NA	NA	NA	13052150	13052315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_13052200_13052300
Isoform_204587_5	chrX	+	3900	1	FSM	ENSMUSG00000094259.2	ENSMUST00000118324.2	138	1	79	-3841	79	3841	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	13055855	13059755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_13055900_13059800
Isoform_20459_3	chr11	+	3446	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	9	junction_3	55.0845310005954	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACTTTGTGATTGAGTA	NA	False	NA	11	True	AGTAAA	-11	NA	51154013	51172589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51161363_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204598_5	chrX	-	179	1	Intergenic	novelGene_11869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAATTTTCGCCGGGTG	NA	False	NA	NA	False	NA	NA	NA	13041122	13040943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_13040900_13041100
Isoform_204599_31079	chrX	+	1322	1	FSM	ENSMUSG00000084349.4	ENSMUST00000120557.2	1210	1	-25	-87	-25	87	mono-exon	FALSE	NA	NA	NA	NA	NA	31079	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACTTGAACACAACTCT	NA	False	NA	NA	False	AATAAA	-42	NA	13068784	13070106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_13068800_13070100
Isoform_2046_11	chr10	-	2356	12	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	3148	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	18.3127106650224	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42351128	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42350930
Isoform_20460_3	chr11	+	5426	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	4	intron_retention	FALSE	canonical	3	16	junction_2	45.0975068486822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51154013	51172597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51158991_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_20461_5	chr11	+	1321	4	NIC	ENSMUSG00000020385.17	novel	742	7	NA	NA	2	442	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	34.3737626039914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACAATTGTGTTGTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	51154002	51163633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626
Isoform_204615_21	chrX	+	175	1	Intergenic	novelGene_11874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	9989	False	NA	NA	False	NA	NA	NA	13082805	13082980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_13082800_13083000
Isoform_204616_24	chrX	+	175	1	Intergenic	novelGene_11875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGAGTAAGGCCCT	NA	False	NA	NA	False	NA	NA	NA	13083431	13083606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_13083400_13083600
Isoform_204617_217	chrX	-	733	1	FSM	ENSMUSG00000083364.5	ENSMUST00000122000.2	393	1	-53	-287	-53	287	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAGTGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	13084894	13084161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_13084200_13084900
Isoform_20462_12	chr11	+	1996	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	18	4	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	49.8634822681421	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153958	51172597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204620_3	chrX	-	280	1	Intergenic	novelGene_11876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCACAAACAAGCCA	NA	False	NA	NA	False	NA	NA	NA	13094438	13094158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_13094200_13094400
Isoform_204622_9	chrX	-	176	1	Intergenic	novelGene_11877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	13098688	13098512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_13098500_13098700
Isoform_204624_68	chr8	+	177	1	Intergenic	novelGene_11045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124700685	124700862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_124700700_124700900
Isoform_20464_57	chr11	+	1870	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	39.9666527661916	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153993	51172597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_20465_4	chr11	+	3404	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	1	intron_retention	FALSE	canonical	3	44	junction_2	39.5929704087117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGTGATTGAGTATTC	NA	False	NA	14	True	AGTAAA	-14	NA	51153991	51172592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_20466_31	chr11	+	1925	13	FSM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	27	-3	-9	1	multi-exon	FALSE	canonical	3	35	junction_3	48.5840480221875	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATTGAGTATTCTT	NA	False	NA	16	True	AGTAAA	-16	NA	51153967	51172594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204665_34	chrX	-	178	1	Intergenic	novelGene_11879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGCTTGAAGC	NA	False	NA	NA	False	NA	NA	NA	13171382	13171204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_13171200_13171400
Isoform_204666_23	chrX	+	176	1	Intergenic	novelGene_11880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGTTTTAAACCCC	NA	False	NA	NA	False	NA	NA	NA	13534676	13534852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_13534700_13534900
Isoform_204669_16	chrX	+	196	1	Intergenic	novelGene_11881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCATCCATCCTGACCAA	NA	False	NA	NA	False	NA	NA	NA	14429448	14429644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_14429400_14429600
Isoform_204672_5	chrX	-	196	1	Intergenic	novelGene_11882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGAGTTGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	17773393	17773197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_17773200_17773400
Isoform_204675_5	chrX	+	174	1	Intergenic	novelGene_11883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAGAAAGGGCAA	NA	False	NA	NA	False	NA	NA	NA	19082983	19083157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_19083000_19083200
Isoform_204679_13	chrX	-	172	1	Intergenic	novelGene_11884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATGAGAATA	NA	False	NA	NA	False	NA	NA	NA	19569477	19569305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_19569300_19569500
Isoform_204680_69	chrX	+	174	1	Intergenic	novelGene_11885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	20071139	20071313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_20071100_20071300
Isoform_204682_36	chrX	+	179	1	Intergenic	novelGene_11886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20190002	20190181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_20190000_20190200
Isoform_204683_10	chrX	-	198	1	Intergenic	novelGene_11887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATATACATATTTCTG	NA	False	NA	NA	False	NA	NA	NA	20206775	20206577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_20206600_20206800
Isoform_204686_61	chrX	+	184	1	Intergenic	novelGene_11888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACAGGCTTGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	20285295	20285479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_20285300_20285500
Isoform_204689_3	chrX	-	5847	1	Antisense	novelGene_ENSMUSG00000037315.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20355551	20349704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_-_20349700_20355600
Isoform_20469_36	chr11	+	1827	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	35.3321898042513	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153977	51172597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204697_373	chrX	-	337	1	FSM	ENSMUSG00000084830.3	ENSMUST00000117527.2	174	1	-56	-107	-56	107	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAGATTAGATAAA	NA	False	NA	NA	False	AATAAA	-12	NA	20447609	20447272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_20447300_20447600
Isoform_2047_8	chr10	-	2315	12	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	9300	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	20.1551830792647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCTTGTCTGATTCAT	NA	False	NA	0	True	AATAAA	-17	NA	42344976	42188581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42344818
Isoform_20470_8	chr11	+	3346	11	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	2	1	intron_retention	FALSE	canonical	3	62	junction_2	33.4628151834241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATTGAGTATTCTT	NA	False	NA	16	True	AGTAAA	-16	NA	51153992	51172594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51158159_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204701_10	chrX	+	908	1	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	80	-9900	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563449	7564357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_+_7563400_7564400
Isoform_204705_3	chrX	-	178	1	Intergenic	novelGene_11889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAATACACTACTGTA	6720	False	NA	NA	False	NA	NA	NA	20574632	20574454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_20574500_20574600
Isoform_204707_141	chrX	+	175	1	Intergenic	novelGene_11890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAAAGTACATG	NA	False	NA	NA	False	NA	NA	NA	20595825	20596000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_20595800_20596000
Isoform_204709_5	chrX	-	204	1	Intergenic	novelGene_11891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAGAATGGGGGAAAGA	NA	False	NA	NA	False	AAAAAG	-5	NA	20646343	20646139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_20646100_20646300
Isoform_204710_4	chrX	+	156	1	Intergenic	novelGene_11892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGTTCACTGATC	NA	False	NA	NA	False	NA	NA	NA	20654386	20654542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_20654400_20654500
Isoform_204712_10	chrX	-	174	1	Intergenic	novelGene_11893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGGGAAAAAAAGAATAATC	NA	False	NA	NA	False	NA	NA	NA	20679626	20679452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_20679500_20679600
Isoform_204713_3	chrX	-	198	1	Intergenic	novelGene_11894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATACATTATATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20700141	20699943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_20699900_20700100
Isoform_204714_83	chrX	+	178	1	Intergenic	novelGene_11819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAGCAACAACA	70	False	NA	NA	False	NA	NA	NA	7577578	7577756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_7577600_7577800
Isoform_204715_41	chrX	-	176	1	Intergenic	novelGene_11895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAAAAAGTGTGGAA	NA	False	NA	NA	False	NA	NA	NA	20733071	20732895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_20732900_20733100
Isoform_204717_3	chrX	-	180	1	Intergenic	novelGene_11896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	20789777	20789597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_20789600_20789800
Isoform_204718_5	chrX	-	751	1	Intergenic	novelGene_11989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGGAAAAAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	61128357	61127606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_61127600_61128400
Isoform_204719_4	chrX	+	181	1	Intergenic	novelGene_11820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAGAG	1867	False	NA	NA	False	NA	NA	NA	7582371	7582552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_7582400_7582600
Isoform_20472_5	chr11	+	5067	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	81	junction_2	32.0314927676751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51153995	51172591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204720_3	chrX	-	1268	1	NIC	ENSMUSG00000054737.12	novel	3130	5	NA	NA	1	-3057	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAACAAAAAA	3286	False	NA	NA	False	NA	NA	NA	20928241	20926973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_20927000_20928200
Isoform_204727_5	chrX	-	203	1	Intergenic	novelGene_11897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAGTAGTAGCCAAAC	NA	False	NA	NA	False	NA	NA	NA	22523225	22523022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_22523000_22523200
Isoform_204728_13	chrX	-	176	1	Intergenic	novelGene_11898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATATAAGTCG	NA	False	NA	NA	False	NA	NA	NA	22537879	22537703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_22537700_22537900
Isoform_20473_7	chr11	+	6271	11	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	4	intron_retention	FALSE	canonical	3	87	junction_2	28.0536985083964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51154001	51172597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51154097_51157997_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204736_78	chrX	-	176	1	Intergenic	novelGene_11899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	23493366	23493190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_23493200_23493400
Isoform_204739_4	chrX	+	155	1	Intergenic	novelGene_11900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	23851903	23852058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_23851900_23852100
Isoform_20474_5	chr11	+	1666	11	FSM	ENSMUSG00000020385.17	ENSMUST00000109113.8	1627	11	-35	-4	1	4	multi-exon	FALSE	canonical	1	3	junction_1	50.5050492525252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153977	51172597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51154097_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_204740_3	chrX	+	178	1	Intergenic	novelGene_11821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGGAGAGAGCAGGGACT	5157	False	NA	NA	False	NA	NA	NA	7612274	7612452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_7612300_7612500
Isoform_204743_469	chrX	-	1061	1	FSM	ENSMUSG00000086691.3	ENSMUST00000121106.2	195	1	-57	-809	-57	809	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAATGAATTTAT	NA	False	NA	NA	False	NA	NA	NA	29313384	29312323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_29312300_29313400
Isoform_204746_3	chrX	+	2807	1	Intergenic	novelGene_11901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGACAAAAAAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	29483412	29486219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_29483400_29486200
Isoform_204747_9	chrX	-	1919	1	Intergenic	novelGene_11902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAGAAAACACTTTACCA	NA	False	NA	NA	False	NA	NA	NA	29486245	29484326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_29484300_29486200
Isoform_204748_41	chrX	+	3645	1	FSM	ENSMUSG00000079297.5	ENSMUST00000112099.2	1350	1	-116	-2179	-116	2179	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTTAACCATAATAGC	NA	False	NA	NA	False	AAAACA	-45	NA	32943007	32946652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_32943000_32946700
Isoform_20477_21	chr11	+	1860	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	31	1225	-1	10	multi-exon	FALSE	canonical	3	19	junction_6	4.87054639873415	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTAAGACCCATCAGCAG	NA	False	NA	NA	False	ATTAAA	-25	NA	51475614	51494091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
Isoform_204779_6	chrX	-	6933	2	Intergenic	novelGene_11903	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	33917272	33910294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_33911733_33911777
Isoform_204781_11	chrX	-	185	1	Intergenic	novelGene_11904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35149179	35148994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_35149000_35149200
Isoform_204782_122	chrX	-	185	1	Intergenic	novelGene_11905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAAGATT	NA	False	NA	NA	False	NA	NA	NA	35171152	35170967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_35171000_35171200
Isoform_204783_161	chrX	-	158	1	Intergenic	novelGene_11822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	7623770	7623612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_7623600_7623800
Isoform_204784_3	chrX	+	176	1	Intergenic	novelGene_11906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATGTATGTATAT	NA	False	NA	NA	False	NA	NA	NA	35444639	35444815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_35444600_35444800
Isoform_204786_16	chrX	-	181	1	Intergenic	novelGene_11823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	7625385	7625204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_7625200_7625400
Isoform_20479_528	chr11	+	748	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	10	284	10	1	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGGCAAGTGTGTGGG	NA	False	NA	17	True	AGTAAA	-12	NA	51510571	51514257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
Isoform_204797_11	chrX	+	182	1	Intergenic	novelGene_11909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTATTTAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35943640	35943822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_35943600_35943800
Isoform_204798_24	chrX	+	242	1	Intergenic	novelGene_11910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAACACACTTTTTGT	NA	False	NA	NA	False	TTTAAA	-4	NA	35983861	35984103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_35983900_35984100
Isoform_2048_6	chr10	-	2289	12	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	9290	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	18.5374314195997	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42344986	42188580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42344855
Isoform_20480_3428	chr11	+	726	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	39	277	3	8	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	3428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTGTGGGTGTTCTT	NA	False	NA	24	True	AGTAAA	-19	NA	51510600	51514264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
Isoform_204802_8	chrX	+	178	1	Intergenic	novelGene_11911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATATTAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	36041082	36041260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_36041100_36041300
Isoform_204809_27	chrX	+	178	1	Intergenic	novelGene_11912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGGGAGAC	NA	False	NA	NA	False	NA	NA	NA	36086589	36086767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_36086600_36086800
Isoform_204811_3	chrX	+	5589	1	Antisense	novelGene_ENSMUSG00000006423.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGCAAGAACATAGCTCT	7766	False	NA	NA	False	NA	NA	NA	36119909	36125498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_+_36119900_36125500
Isoform_204813_87	chrX	-	157	1	Intergenic	novelGene_11913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCTGACAGTATAT	NA	False	NA	NA	False	NA	NA	NA	36149817	36149660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_36149700_36149800
Isoform_204817_15	chrX	+	177	1	Intergenic	novelGene_11914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAC	2145	False	NA	NA	False	NA	NA	NA	36330575	36330752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_36330600_36330800
Isoform_204818_61	chrX	-	174	1	Intergenic	novelGene_11915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATTATATTTATCTA	NA	False	NA	NA	False	NA	NA	NA	36338108	36337934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_36337900_36338100
Isoform_204819_19	chrX	+	218	1	Intergenic	novelGene_11916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTCAATTCCCAAAAA	2632	False	NA	NA	False	NA	NA	NA	36339339	36339557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_36339300_36339600
Isoform_204820_6	chrX	+	282	1	Intergenic	novelGene_11917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAATAAATCCTTAA	2633	False	NA	NA	False	NA	NA	NA	36339340	36339622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_36339300_36339600
Isoform_204821_173	chrX	+	204	1	Intergenic	novelGene_11918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGACAGAATCTATGTAG	7518	False	NA	NA	False	NA	NA	NA	36344225	36344429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_36344200_36344400
Isoform_204825_6	chrX	-	172	1	Intergenic	novelGene_11919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAAGTTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	36364988	36364816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_36364800_36365000
Isoform_204826_22	chrX	-	210	1	Intergenic	novelGene_12024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTGCACAGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	74109082	74108872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_74108900_74109100
Isoform_204828_4	chrX	-	155	1	Intergenic	novelGene_11920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36396196	36396041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_36396000_36396200
Isoform_204829_3	chrX	-	178	1	Intergenic	novelGene_11824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7916	False	NA	NA	False	NA	NA	NA	7663490	7663312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_7663300_7663500
Isoform_204830_3	chrX	+	156	1	Intergenic	novelGene_11921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	36436544	36436700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_36436500_36436700
Isoform_204832_71	chrX	+	1228	1	FSM	ENSMUSG00000036537.7	ENSMUST00000046433.7	1223	1	-8	3	-8	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTTTCTTTCTTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	36454889	36456117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_36454900_36456100
Isoform_204834_1048	chrX	-	819	1	FSM	ENSMUSG00000080241.4	ENSMUST00000116499.4	451	1	-100	-268	-100	268	mono-exon	FALSE	NA	NA	NA	NA	NA	1048	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCTTGAAAAAAAAAAAAGAA	NA	False	NA	0	True	AATAAA	-14	NA	36807850	36807031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_36807000_36807800
Isoform_204839_6	chrX	+	1896	1	ISM	ENSMUSG00000048047.4	ENSMUST00000049740.3	5122	2	5355	3	5314	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTGAGTGATTTTTT	NA	False	NA	2	True	AATAAA	-13	NA	37284024	37285920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chrX_+_37284000_37285900
Isoform_204846_8	chrX	-	180	1	Intergenic	novelGene_11922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAGAATGGT	NA	False	NA	NA	False	NA	NA	NA	37581249	37581069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_37581100_37581200
Isoform_204851_37	chrX	+	171	1	Intergenic	novelGene_11923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATTGGGCTGTAGG	NA	False	NA	NA	False	NA	NA	NA	37605562	37605733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_37605600_37605700
Isoform_204870_42	chrX	+	171	1	Intergenic	novelGene_11925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATAAAGCTAGAA	NA	False	NA	NA	False	NA	NA	NA	37658485	37658656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_37658500_37658700
Isoform_204872_3	chrX	-	332	1	Intergenic	novelGene_11926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37714322	37713990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_37714000_37714300
Isoform_204878_3	chr14	+	176	1	Intergenic	novelGene_3641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAGAAAGAAATTAAGA	NA	False	NA	NA	False	NA	NA	NA	73252269	73252445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_73252300_73252400
Isoform_204880_28	chr7	-	200	1	Intergenic	novelGene_10300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATTACAGTTCAGCAGA	NA	False	NA	NA	False	NA	NA	NA	115962483	115962283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_115962300_115962500
Isoform_204882_12	chr5	+	174	1	Intergenic	novelGene_8938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	124809005	124809179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_124809000_124809200
Isoform_204888_18	chrX	-	2517	1	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	-29484	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41000763	40998246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_40998200_41000800
Isoform_204890_7	chrX	-	176	1	Intergenic	novelGene_11929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATTACTATCAGA	NA	False	NA	NA	False	NA	NA	NA	41032729	41032553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_41032600_41032700
Isoform_204891_65	chrX	-	177	1	Intergenic	novelGene_11930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	41038758	41038581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_41038600_41038800
Isoform_204892_369	chrX	+	170	1	Intergenic	novelGene_11931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	41147522	41147692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_41147500_41147700
Isoform_204893_3	chrX	-	178	1	Intergenic	novelGene_11825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGGC	NA	False	NA	NA	False	NA	NA	NA	7724486	7724308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_7724300_7724500
Isoform_20491_5	chr11	+	3427	4	FSM	ENSMUSG00000052563.14	ENSMUST00000064493.6	3426	4	0	-1	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.64279609239471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGTTCCTGACTACAA	NA	False	NA	12	True	AATAAA	-18	NA	51541782	51548508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51542041_51544560_51544699_51544818_51544941_51545599
Isoform_204915_17	chrX	-	189	1	Intergenic	novelGene_11932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAGACGAAAGT	NA	False	NA	NA	False	NA	NA	NA	41220204	41220015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_41220000_41220200
Isoform_204919_148	chrX	+	199	1	Intergenic	novelGene_11933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTCCAACTTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	42542424	42542623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_42542400_42542600
Isoform_20492_6	chr11	+	3443	4	FSM	ENSMUSG00000052563.14	ENSMUST00000117859.8	3410	4	-34	1	-34	0	multi-exon	FALSE	canonical	2	4	junction_2	6.94422221866655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	11	True	AATAAA	-17	NA	51541746	51548507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51542041_51544560_51544699_51544837_51544941_51545599
Isoform_204923_4	chrX	+	179	1	Intergenic	novelGene_11826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGCTAAACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	7756784	7756963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_7756800_7757000
Isoform_204924_4	chrX	+	177	1	Intergenic	novelGene_11934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTAACAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	46998861	46999038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_46998900_46999000
Isoform_204925_6	chrX	+	173	1	Intergenic	novelGene_11935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATCTTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47048587	47048760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_47048600_47048800
Isoform_204927_7	chrX	-	177	1	Intergenic	novelGene_11936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATAAATACT	NA	False	NA	NA	False	NA	NA	NA	47068452	47068275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_47068300_47068500
Isoform_204930_4	chrX	-	2588	1	NIC	ENSMUSG00000036985.13	novel	2982	10	NA	NA	-11	579	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	47297553	47294965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_47295000_47297600
Isoform_204931_98	chr8	+	176	1	Intergenic	novelGene_10999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121872454	121872630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_121872500_121872600
Isoform_204932_15	chrX	+	176	1	Intergenic	novelGene_11937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	47351941	47352117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_47351900_47352100
Isoform_204933_3	chrX	-	1123	1	Intergenic	novelGene_11938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47360479	47359356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_47359400_47360500
Isoform_204941_7	chrX	+	258	1	Intergenic	novelGene_11939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGTAGTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	47560686	47560944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_47560700_47560900
Isoform_204942_25	chrX	-	196	1	Intergenic	novelGene_11940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATAAGTAAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	47561199	47561003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_47561000_47561200
Isoform_20495_23	chr11	+	1228	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	-26	-1	-26	1	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTGGGCAGCTGTT	3539	False	NA	13	True	AATAAA	-19	NA	51654487	51682753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
Isoform_204950_18	chr15	+	176	1	Intergenic	novelGene_3881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52985801	52985977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_52985800_52986000
Isoform_204951_4	chrX	-	174	1	Intergenic	novelGene_11941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTTAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47673130	47672956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_47673000_47673100
Isoform_204952_3	chrX	-	1108	1	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	6	-7248	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAGTAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47683323	47682215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrX_-_47682200_47683300
Isoform_204953_3	chrX	-	301	1	Intergenic	novelGene_11942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	47684995	47684694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_47684700_47685000
Isoform_204956_11	chrX	+	172	1	Intergenic	novelGene_11943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTAAAATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47756026	47756198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_47756000_47756200
Isoform_204957_205	chr5	-	177	1	Intergenic	novelGene_8797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115287375	115287198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_115287200_115287400
Isoform_204959_7	chrX	+	1710	1	Intergenic	novelGene_11945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48165639	48167349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_48165600_48167300
Isoform_20496_614	chr11	+	1194	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	8	-1	1	1	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTGGGCAGCTGTT	3573	False	NA	13	True	AATAAA	-19	NA	51654521	51682753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
Isoform_204962_5	chrX	-	157	1	Intergenic	novelGene_11946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAACAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	49578530	49578373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_49578400_49578500
Isoform_204967_7	chr4	+	171	2	Intergenic	novelGene_7911	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	5258	False	NA	NA	False	NA	NA	NA	129040919	129041323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_129041063_129041295
Isoform_204968_7	chrX	+	1033	1	Intergenic	novelGene_11947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTCTCACACATTCGC	NA	False	NA	NA	False	NA	NA	NA	50203975	50205008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_50204000_50205000
Isoform_204969_156	chrX	+	176	1	Intergenic	novelGene_11948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAACTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50274856	50275032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_50274900_50275000
Isoform_204970_59	chrX	+	2469	1	Intergenic	novelGene_11949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50291190	50293659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_50291200_50293700
Isoform_204974_6	chrX	-	177	1	Intergenic	novelGene_11950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	50847830	50847653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_50847700_50847800
Isoform_204975_7	chrX	+	162	1	Intergenic	novelGene_11951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTAAAATGTGATAGG	NA	False	NA	NA	False	NA	NA	NA	50944025	50944187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_50944000_50944200
Isoform_204977_59	chrX	+	174	1	Intergenic	novelGene_11952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAACACATATTA	NA	False	NA	NA	False	NA	NA	NA	51222438	51222612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_51222400_51222600
Isoform_204979_4	chrX	-	170	1	Intergenic	novelGene_11953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	51261884	51261714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_51261700_51261900
Isoform_204980_47	chrX	-	175	1	Intergenic	novelGene_11954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAACCACCTTCACTG	NA	False	NA	NA	False	NA	NA	NA	51299793	51299618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_51299600_51299800
Isoform_204981_3	chrX	-	177	1	Intergenic	novelGene_11955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATAAGCTAA	NA	False	NA	NA	False	NA	NA	NA	51779506	51779329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_51779300_51779500
Isoform_204982_9	chrX	-	178	1	Intergenic	novelGene_11956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGACTTAAAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	51815327	51815149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_51815100_51815300
Isoform_204983_8	chrX	+	177	1	Intergenic	novelGene_11957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAGGCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	51817035	51817212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_51817000_51817200
Isoform_204984_8	chrX	+	178	1	Intergenic	novelGene_11958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTTTTACTTAT	NA	False	NA	NA	False	NA	NA	NA	51825062	51825240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_51825100_51825200
Isoform_204985_9	chrX	-	520	1	FSM	ENSMUSG00000070106.3	ENSMUST00000093598.3	75	1	-84	-361	-84	361	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATGGGTTTCTTTT	9887	False	NA	NA	False	AATAAA	-18	NA	51830728	51830208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_51830200_51830700
Isoform_204990_514	chrX	-	450	1	FSM	ENSMUSG00000083621.2	ENSMUST00000119571.2	408	1	-12	-30	-12	30	mono-exon	FALSE	NA	NA	NA	NA	NA	514	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-6	NA	51861638	51861188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_51861200_51861600
Isoform_204992_6	chrX	+	771	1	Genic_Genomic	ENSMUSG00000073207.2	novel	NA	NA	NA	NA	-9	-7507	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51880067	51880838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_51880100_51880800
Isoform_204995_16791	chrX	+	949	1	FSM	ENSMUSG00000081684.5	ENSMUST00000117295.2	882	1	-26	-41	-26	41	mono-exon	FALSE	NA	NA	NA	NA	NA	16791	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	51987438	51988387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_+_51987400_51988400
Isoform_20500_7	chr11	+	1106	6	NIC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	291.41544228129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTTGGGCAGCTGT	3585	False	NA	12	True	AATAAA	-18	NA	51654533	51682752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_51654619_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
Isoform_205005_10	chrX	+	1140	1	Genic_Genomic	ENSMUSG00000025626.17	novel	NA	NA	NA	NA	-8	-27219	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	52001134	52002274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chrX_+_52001100_52002300
Isoform_205006_7	chrX	-	4169	1	Antisense	novelGene_ENSMUSG00000025626.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	52015612	52011443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chrX_-_52011400_52015600
Isoform_205013_16	chrX	-	179	1	Intergenic	novelGene_11959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATCCAGGAAACC	1757	False	NA	NA	False	NA	NA	NA	52427086	52426907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_52426900_52427100
Isoform_205015_42	chrX	-	1252	1	FSM	ENSMUSG00000067925.5	ENSMUST00000088779.5	1195	1	-66	9	-66	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAATGGAGTCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	52645715	52644463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52644500_52645700
Isoform_205016_35	chrX	-	1230	1	FSM	ENSMUSG00000067924.5	ENSMUST00000088778.5	1232	1	5	-3	5	3	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAATGGAGTCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	52672370	52671140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrX_-_52671100_52672400
Isoform_205020_5	chrY	+	431	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	2973	5943	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGTGTGTCTTCCTT	144	False	NA	NA	False	AATAAA	-24	NA	90804692	90833677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrY_+_90804928_90827617_90827691_90833554
Isoform_205022_3	chrY	+	215	2	NIC	ENSMUSG00000096768.9	novel	887	5	NA	NA	33	0	intron_retention	FALSE	canonical	2	80	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	5095	False	NA	NA	False	AATAAA	-17	NA	90797149	90827733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chrY_+_90797249_90827617
Isoform_205029_5	chrY	+	2627	1	Intergenic	novelGene_12338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTGTTAGAAAATTTTG	3	False	NA	NA	False	NA	NA	NA	3934676	3937303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_3934700_3937300
Isoform_20503_1186	chr11	+	1850	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	-21	3	-21	-3	multi-exon	FALSE	canonical	3	1066	junction_1	20	1186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGTTAGGTTCAAGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	51858466	51868158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51858785_51860970_51861071_51866726
Isoform_205031_112	chrY	-	178	1	Intergenic	novelGene_12339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	4413653	4413475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_-_4413500_4413700
Isoform_205032_3	chrY	+	173	1	Intergenic	novelGene_12340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	17001714	17001887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_17001700_17001900
Isoform_205040_8	chrY	-	2432	2	Intergenic	novelGene_12342	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	43882395	43879916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_-_43880024_43880070
Isoform_205042_5	chrY	-	3622	2	Intergenic	novelGene_12343	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	43883585	43879916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_-_43880024_43880070
Isoform_205043_4	chrY	-	3686	2	Intergenic	novelGene_12344	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	43883649	43879916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_-_43880024_43880070
Isoform_205047_7	chrY	-	176	1	Intergenic	novelGene_12345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAATTAACTG	NA	False	NA	NA	False	NA	NA	NA	44198110	44197934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_-_44197900_44198100
Isoform_205048_3	chr17	+	571	1	Intergenic	novelGene_4894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGGGTTTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	32588512	32589083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32588500_32589100
Isoform_205049_3	chrY	+	6762	1	Intergenic	novelGene_12346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	47718853	47725615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_47718900_47725600
Isoform_205050_4	chrY	+	1344	1	Intergenic	novelGene_12349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	60518567	60519911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_60518600_60519900
Isoform_205051_8	chrY	+	1283	1	Intergenic	novelGene_12347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	47724333	47725616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_47724300_47725600
Isoform_205053_9	chrY	+	664	1	Intergenic	novelGene_12348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATCAGAGTAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	47724943	47725607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_47724900_47725600
Isoform_205054_4	chrY	+	534	1	Intergenic	novelGene_12351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	60519377	60519911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_60519400_60519900
Isoform_205062_3	chrY	-	866	1	Intergenic	novelGene_12352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAGAAGGAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	74744115	74743249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_-_74743200_74744100
Isoform_205064_18	chrY	+	4080	1	Intergenic	novelGene_12353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	87788230	87792310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_87788200_87792300
Isoform_205072_3	chrY	+	674	4	NNC	ENSMUSG00000096768.9	novel	1272	3	NA	NA	173	5936	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	4298	False	NA	NA	False	AATAAA	-17	NA	90796352	90833670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chrY_+_90796644_90804283_90804288_90804663_90804927_90833554
Isoform_205075_13	chrY	+	171	1	Intergenic	novelGene_12336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	1138947	1139118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_1138900_1139100
Isoform_20512_796	chr11	+	2622	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	143	4337	143	3749	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	60	True	NA	NA	NA	51989650	52014268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
Isoform_20513_57	chr11	+	2026	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	34	5042	34	3044	multi-exon	TRUE	canonical	3	1809	junction_6	129.264586539908	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTCTGGCAACTCCT	NA	False	NA	21	True	AATAAA	-17	NA	51989541	52013563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
Isoform_20514_1614	chr11	+	1916	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	146	5040	146	3046	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTGGCAACTCCTTG	NA	False	NA	23	True	AATAAA	-19	NA	51989653	52013565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
Isoform_2052_178	chr10	-	796	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	-15	79	11	-53	multi-exon	FALSE	canonical	3	617	junction_3	154.165135127528	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCTCCTAATTGTCAG	NA	False	NA	0	True	AATAAA	-17	NA	43416979	43401207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
Isoform_2053_128	chr10	-	880	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	-43	23	-17	3	multi-exon	FALSE	canonical	3	617	junction_3	154.165135127528	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTCTCCTGTCAT	NA	False	NA	-35	True	CATAAA	-19	NA	43417007	43401151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
Isoform_2054_156	chr10	-	852	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	8	0	6	0	multi-exon	TRUE	canonical	3	617	junction_3	154.165135127528	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCGGAGCACTCT	NA	False	NA	-12	True	AATAAA	-17	NA	43416956	43401128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
Isoform_20556_90	chr11	+	1270	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	-14	184	0	-184	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	397	False	NA	14	True	ATTAAA	-17	NA	52122821	52137501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
Isoform_20558_2579	chr11	+	1227	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	29	184	1	-184	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	440	False	NA	14	True	ATTAAA	-17	NA	52122864	52137501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
Isoform_20559_529	chr11	+	1391	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	29	20	1	-20	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTGCTTTTGTGGATG	440	False	NA	14	True	AATAAA	-21	NA	52122864	52137665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
Isoform_2058_112	chr10	-	2015	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	5	-39	5	39	multi-exon	FALSE	canonical	3	72	junction_2	11.040380428228	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATGCATTCTGCATA	NA	False	NA	NA	False	TATAAA	-45	NA	43777736	43750144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
Isoform_20588_503	chr11	+	1855	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	167	0	-108	0	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5298	False	NA	30	True	AATAAA	-26	NA	52251853	52280224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
Isoform_20589_5846	chr11	+	1804	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	218	0	-57	0	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	5846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5349	False	NA	30	True	AATAAA	-26	NA	52251904	52280224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
Isoform_20612_281	chr11	+	2438	3	FSM	ENSMUSG00000036275.14	ENSMUST00000109057.8	2472	3	32	2	32	-2	multi-exon	FALSE	canonical	3	140	junction_1	2	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTCTGTTAGTGTG	4590	False	NA	NA	False	AATAAA	-14	NA	52287286	52299553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_52287431_52293872_52294385_52297771
Isoform_2062_25	chr10	-	3371	3	ISM	ENSMUSG00000038151.14	ENSMUST00000039174.11	5281	8	17516	-2	15978	2	3prime_fragment	FALSE	canonical	3	47	junction_2	4	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAATGCTTGTCTAGTGTC	NA	False	NA	-5	True	ATTAAA	-20	NA	44317228	44313170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_44316239_44316654_44316784_44317054
Isoform_20623_3	chr11	+	1314	5	NIC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	6	-71	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	136.466799991793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTATCAGAAAATTCT	NA	False	NA	22	True	AATAAA	-16	NA	53215511	53224057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_53215569_53218095_53218255_53221513_53221559_53222474_53222599_53223128
Isoform_20624_4	chr11	+	1323	5	NNC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	135.234980681775	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAAGTTTCAAGTTTTT	NA	False	NA	18	True	TATAAA	-31	NA	53215508	53224132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_53215569_53218095_53218255_53221513_53221559_53222474_53222530_53223128
Isoform_20625_132	chr11	+	1192	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	15	60	15	-60	multi-exon	FALSE	canonical	3	238	junction_3	30.2691628926573	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTCTGATTTTTCTAT	NA	False	NA	33	True	AATAAA	-27	NA	53215520	53224068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
Isoform_20626_61	chr11	+	1252	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	15	0	15	0	multi-exon	FALSE	canonical	3	238	junction_3	30.2691628926573	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATGTAAGTTTCAAGT	NA	False	NA	14	True	TATAAA	-27	NA	53215520	53224128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
Isoform_20627_3	chr11	+	1206	3	NIC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	10	-6	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGGAATGATGTAAGTT	NA	False	NA	8	True	TATAAA	-21	NA	53215515	53224122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_53215569_53218095_53218255_53223128
Isoform_2063_7	chr10	-	2173	3	ISM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	15953	-1269	15953	-105	3prime_fragment	FALSE	canonical	3	47	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTTCAACAATTACCT	NA	False	NA	NA	False	ATTAAA	-18	NA	44317253	44314393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_44316239_44316654_44316784_44317054
Isoform_20635_11	chr11	+	4736	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-86	5449	-86	548	multi-exon	FALSE	canonical	3	75	junction_1	17.4421185639818	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTCTGAAGGCTGCA	NA	False	NA	NA	False	AGTAAA	-20	NA	53241573	53307208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
Isoform_20636_56	chr11	+	9560	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-55	594	-55	-594	multi-exon	FALSE	canonical	3	75	junction_1	17.4421185639818	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTTTGCATGCACTGTG	NA	False	NA	34	True	AATAAA	-21	NA	53241604	53312063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
Isoform_2064_5	chr10	-	2371	3	ISM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	15953	-1467	15953	93	3prime_fragment	FALSE	canonical	3	47	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATACCAGTATACCAT	NA	False	NA	-12	True	AATAAA	-23	NA	44317253	44314195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_44316239_44316654_44316784_44317054
Isoform_20644_20	chr11	+	4482	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	79	2	-29	-1	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCATGGTGTCATTT	NA	False	NA	15	True	ATTAAA	-17	NA	53410705	53434921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_20645_44	chr11	+	4460	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	102	1	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	16	True	ATTAAA	-18	NA	53410728	53434922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_20646_16	chr11	+	4591	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	-29	1	1	0	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	16	True	ATTAAA	-18	NA	53410597	53434922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_2065_4	chr10	-	5199	7	FSM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	-58	-1116	3	0	multi-exon	FALSE	canonical	3	20	junction_6	13.6218778278017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAATGCTTGTCTAGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	44334741	44313172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
Isoform_20650_7	chr11	+	4662	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	-100	1	-46	0	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	16	True	ATTAAA	-18	NA	53410526	53434922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_20651_60	chr11	+	4303	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	133	0	-29	0	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	16	True	ATTAAA	-18	NA	53410705	53434922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_20652_16	chr11	+	4397	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	38	1	14	-1	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCATGGTGTCATTT	NA	False	NA	15	True	ATTAAA	-17	NA	53410610	53434921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_20656_31	chr11	+	4448	10	NIC	ENSMUSG00000018398.19	novel	1806	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.8486099428282	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	16	True	ATTAAA	-18	NA	53410734	53434922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_20658_11	chr11	+	4575	10	NIC	ENSMUSG00000018398.19	novel	4563	10	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.8486099428282	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCATGGTGTCATTT	NA	False	NA	15	True	ATTAAA	-17	NA	53410606	53434921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_20661_28	chr11	+	4272	10	NIC	ENSMUSG00000018398.19	novel	4436	10	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.2766184179422	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCATGGTGTCATTT	NA	False	NA	15	True	ATTAAA	-17	NA	53410729	53434921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_20663_13	chr11	+	4391	10	NIC	ENSMUSG00000018398.19	novel	4436	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.2766184179422	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	16	True	ATTAAA	-18	NA	53410611	53434922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_20669_55	chr11	+	2266	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	22	2	4	1	multi-exon	FALSE	canonical	2	5	junction_9	19.4950915296646	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGAGAGAACTCCTTA	941	False	NA	19	True	AATAAA	-16	NA	53458227	53491930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
Isoform_20672_9	chr11	+	4217	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	-8	-1919	-8	1057	multi-exon	FALSE	canonical	2	5	junction_9	19.4950915296646	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGGTGGACATTGTTC	911	False	NA	3	True	ATTAAA	-19	NA	53458197	53493851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
Isoform_20674_98	chr11	+	2116	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	19	1	-15	-1	multi-exon	FALSE	canonical	3	46	junction_1	9.82940913537621	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGTGTGGCTTTTTATTT	NA	False	NA	9	True	TATAAA	-16	NA	53660859	53668148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
Isoform_20676_5	chr11	+	2101	10	FSM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	-31	-1	-13	1	multi-exon	FALSE	canonical	1	2	junction_1	21.2573879677132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	False	NA	11	True	TATAAA	-18	NA	53661289	53668150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53661518_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
Isoform_20677_5	chr11	+	2685	9	ISM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	454	2	-8	-2	3prime_fragment	FALSE	canonical	3	59	junction_3	8.3132048573339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGTGTGGCTTTTTATT	NA	False	NA	8	True	TATAAA	-15	NA	53661294	53668147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
Isoform_20678_3	chr11	+	599	5	FSM	ENSMUSG00000018906.15	ENSMUST00000135596.9	610	5	30	-19	14	19	multi-exon	FALSE	canonical	3	54	junction_4	6.75925291729789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCCCAGTAGTAACATT	NA	False	NA	NA	False	TTTAAA	-35	NA	53991830	54002480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248
Isoform_20679_136	chr11	+	2222	16	FSM	ENSMUSG00000018906.15	ENSMUST00000093107.12	2263	16	51	-10	0	0	multi-exon	FALSE	canonical	3	31	junction_12	14.6945190084225	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTATTTTGGAGTGTTTT	NA	False	NA	25	True	AATAAA	-27	NA	53991800	54022488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
Isoform_20680_117	chr11	+	2223	16	FSM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	13	-6	1	-4	multi-exon	FALSE	canonical	3	35	junction_12	14.0816665680357	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTATTTTGGAGTG	NA	False	NA	21	True	AATAAA	-23	NA	53991801	54022484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
Isoform_20682_7	chr11	+	2643	15	NIC	ENSMUSG00000018906.15	novel	2263	16	NA	NA	-29	3	intron_retention	FALSE	canonical	3	31	junction_11	15.186594518233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGAGTGTTTTGGTTTT	NA	False	NA	31	True	AATAAA	-33	NA	53991864	54022494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
Isoform_20685_7	chr11	+	2638	15	NIC	ENSMUSG00000018906.15	novel	2230	16	NA	NA	-29	5	intron_retention	FALSE	canonical	3	35	junction_11	14.555313217418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTATTTTGGAGT	NA	False	NA	20	True	AATAAA	-22	NA	53991864	54022483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
Isoform_20686_6	chr11	+	1834	12	NIC	ENSMUSG00000018906.15	novel	1997	3	NA	NA	-45	-1	combination_of_known_junctions	TRUE	canonical	1	6	junction_1	24.1373480367652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAAATAGCCTTATTT	NA	False	NA	14	True	AATAAA	-16	NA	54003983	54022477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_54004156_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
Isoform_20687_37	chr11	+	2548	21	FSM	ENSMUSG00000020333.18	ENSMUST00000093106.12	5804	21	15	3241	15	-13	multi-exon	FALSE	canonical	3	16	junction_10	11.8346947573649	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGAAAAAACATAA	NA	False	NA	-15	True	AATATA	-27	NA	54194638	54252341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
Isoform_2069_10	chr10	-	5442	5	FSM	ENSMUSG00000063804.9	ENSMUST00000079390.7	5402	5	-52	12	-52	-12	multi-exon	FALSE	canonical	3	19	junction_4	19.8368344248774	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGTTTGGAGATATTT	NA	False	NA	-12	True	AATAAA	-21	NA	45346349	45252727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45346146
Isoform_20690_47	chr11	+	2534	21	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	29	-13	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	9.20584053739798	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGAAAAAACATAA	NA	False	NA	-15	True	AATATA	-27	NA	54194652	54252341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
Isoform_20692_10	chr11	+	2583	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108905.10	5807	21	-13	3237	-13	-13	multi-exon	FALSE	canonical	3	10	junction_1	14.4874946074192	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGAAAAAACATAA	NA	False	NA	-15	True	AATATA	-27	NA	54195014	54252341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
Isoform_20694_4	chr11	+	2846	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108905.10	5807	21	-276	3237	-79	-13	multi-exon	FALSE	canonical	3	10	junction_1	14.4874946074192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGAAAAAACATAA	NA	False	NA	-15	True	AATATA	-27	NA	54194751	54252341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
Isoform_20695_12	chr11	+	2567	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108904.10	2594	21	3	24	3	-13	multi-exon	FALSE	canonical	3	10	junction_1	12.5876924017073	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGAAAAAACATAA	NA	False	NA	-15	True	AATATA	-27	NA	54195030	54252341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
Isoform_20698_172	chr11	+	6257	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	-1	-1	-1	1	multi-exon	FALSE	canonical	3	95	junction_9	15.4083965785252	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	1975	False	NA	28	True	AATAAA	-18	NA	54329023	54409062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
Isoform_207_4769	ERCC-00171	+	487	1	FSM	ERCC-00171A	DQ854994	489	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4769	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	1	488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00171_+_0_500
Isoform_20701_6	chr11	+	6359	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	-108	4	-108	-4	multi-exon	TRUE	canonical	3	95	junction_9	15.4083965785252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGGGTAATGTTTGTG	1868	False	NA	23	True	AATAAA	-13	NA	54328916	54409057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
Isoform_2071_87	chr10	-	5439	6	NIC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	17	-13	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	6.46838465151849	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGGTTTGGAGATATT	NA	False	NA	-13	True	AATAAA	-20	NA	45362474	45252728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
Isoform_20713_20	chr11	+	1830	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	1	-2	1	2	multi-exon	FALSE	canonical	3	58	junction_8	14.7082743152735	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGCTCATTATTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	54413716	54525837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
Isoform_20720_51	chr11	+	8145	28	FSM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	44	0	1	0	multi-exon	FALSE	canonical	3	58	junction_8	12.2166092610894	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	13	True	AATAAA	-14	NA	54413716	54590111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
Isoform_20721_13	chr11	+	8188	28	FSM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	1	0	1	0	multi-exon	FALSE	canonical	3	58	junction_8	12.2166092610894	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	13	True	AATAAA	-14	NA	54413673	54590111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
Isoform_20722_6	chr11	+	7846	27	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	5	junction_26	19.1977023403304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTTCCTTCCCAAGTA	NA	False	NA	17	True	AATAAA	-18	NA	54413716	54590115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54586905
Isoform_20723_3	chr11	+	8037	27	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	19.827659838583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	13	True	AATAAA	-14	NA	54413716	54590111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
Isoform_20724_3	chr11	+	1757	12	NIC	ENSMUSG00000037533.21	novel	1829	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	28.1436691940209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGCTCATTATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	54413716	54525835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_54413945_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
Isoform_20728_1897	chr11	+	568	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	63	5	-35	-5	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGGATTTGTTACTC	NA	False	NA	29	True	AATAAA	-18	NA	54757271	54761322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54757427_54760673_54760779_54761014
Isoform_20729_1023	chr11	+	631	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	0	5	0	-5	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGGATTTGTTACTC	NA	False	NA	29	True	AATAAA	-18	NA	54757208	54761322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54757427_54760673_54760779_54761014
Isoform_2073_4	chr10	-	3469	6	NIC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-54	-2054	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	6.46838465151849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATACTTGTTAGTAACT	NA	False	NA	NA	False	AATAAA	-19	NA	45362545	45254769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
Isoform_20733_56	chr11	+	1438	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	156	0	2	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	9	True	AGTAAA	-16	NA	54793753	54801203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
Isoform_20734_46	chr11	+	1473	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	121	0	-33	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	9	True	AGTAAA	-16	NA	54793718	54801203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
Isoform_20736_818	chr11	+	2018	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	-22	2131	-22	-2131	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54988918	55001724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
Isoform_20738_10	chr11	+	2102	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	-106	2131	-106	-2131	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54988834	55001724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
Isoform_20741_113	chr11	+	5187	13	NNC	ENSMUSG00000020261.16	novel	1950	12	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	23.3896641465603	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTGCAAACTGTGTCT	NA	False	NA	23	True	AATAAA	-23	NA	55095188	55127155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55123713_55123734_55126998_55127038
Isoform_2075_3	chr10	-	2783	4	NIC	ENSMUSG00000063804.9	novel	2902	4	NA	NA	-58	4	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	24.5130350811336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTTGGATCTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	45362549	45332674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_45335000_45345132_45345315_45352443_45352493_45362322
Isoform_20755_4051	chr11	+	2327	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	50	4326	17	-4326	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	4051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGGGGAACTGTA	NA	False	NA	39	True	AATAAA	-26	NA	55360560	55391338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
Isoform_20756_3642	chr11	+	2695	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	50	3958	17	-3958	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	3642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCATCTGGCAATGTA	NA	False	NA	14	True	ATTAAA	-15	NA	55360560	55391706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
Isoform_20757_327	chr11	+	2409	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	-32	4326	-32	-4326	multi-exon	TRUE	canonical	3	6361	junction_7	586.595613027527	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGGGGAACTGTA	NA	False	NA	39	True	AATAAA	-26	NA	55360478	55391338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
Isoform_20759_237	chr11	+	2775	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	-30	3958	-30	-3958	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCATCTGGCAATGTA	NA	False	NA	14	True	ATTAAA	-15	NA	55360480	55391706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
Isoform_2078_54	chr10	-	4303	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-73	-14	-24	14	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTTCTGAGTAGCTCCT	NA	False	NA	-13	True	AATAAA	-40	NA	52258244	52213133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
Isoform_2082_107	chr10	-	4278	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-46	-16	-2	-12	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTGAGTAGCTCCTGT	NA	False	NA	-11	True	AATAAA	-42	NA	52258217	52213131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
Isoform_20852_54	chr11	+	4799	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	24	4	1	-3	multi-exon	FALSE	canonical	3	17	junction_1	35	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTGAATGATGTAT	NA	False	NA	15	True	AATAAA	-16	NA	57409513	57424637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57409539_57418684_57419116_57420294
Isoform_20854_161	chr11	+	4835	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	1	3	1	-3	multi-exon	FALSE	canonical	3	62	junction_1	12.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTGAATGATGTAT	NA	False	NA	15	True	AATAAA	-16	NA	57409513	57424637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57409575_57418684_57419116_57420294
Isoform_20859_17	chr11	+	1763	3	FSM	ENSMUSG00000020520.15	ENSMUST00000108846.2	1745	3	-16	-2	7	2	multi-exon	FALSE	canonical	3	46	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGGTGTCTGCCTGGTT	NA	False	NA	NA	False	AGTAAA	-26	NA	57536274	57617739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57536544_57612120_57612224_57616348
Isoform_20862_15	chr11	+	4698	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	2	15	2	-15	multi-exon	FALSE	canonical	3	24	junction_9	7.98034776267445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGTCTGGCATGTCC	NA	False	NA	NA	False	AATAAA	-18	NA	57536269	57678325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
Isoform_20864_3	chr11	+	4602	11	NIC	ENSMUSG00000020520.15	novel	4715	12	NA	NA	-6	-16	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	12.9676520619579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGTCTGGCATGTC	NA	False	NA	NA	False	AATAAA	-17	NA	57536261	57678324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_57536544_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
Isoform_20865_393	chr11	+	1172	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	-23	2	-23	-2	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTCGGTCAGGAGGAT	NA	False	NA	22	True	AATAAA	-22	NA	57692439	57701041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
Isoform_20867_15	chr11	+	5830	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	-16	-4663	-16	4663	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATGGCTCCCTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	57692446	57705706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
Isoform_20869_8	chr11	+	1325	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	-55	-119	-55	119	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGAGTGCTCAGCAAGGC	NA	False	NA	NA	False	TATAAA	-19	NA	57692407	57701162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
Isoform_2087_18	chr10	-	7351	13	FSM	ENSMUSG00000038594.10	ENSMUST00000220443.2	7425	13	73	1	73	-1	multi-exon	FALSE	canonical	2	8	junction_7	3.73794358200097	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGCTTTCATGGTGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	53255970	53149539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_53154341_53157444_53157677_53159932_53160041_53167859_53167911_53168353_53168472_53172309_53172465_53174148_53174302_53177597_53177778_53188603_53188722_53195693_53195816_53224567_53225356_53234144_53234304_53255604
Isoform_20871_8	chr11	+	3067	3	NIC	ENSMUSG00000020519.6	novel	1151	4	NA	NA	-62	-3	intron_retention	FALSE	canonical	3	563	junction_1	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTCGGTCAGGAGGA	NA	False	NA	21	True	AATAAA	-21	NA	57692400	57701040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_57693116_57696869_57698949_57700767
Isoform_20873_44	chr11	+	2615	11	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-149	11648	-149	7373	5prime_fragment	FALSE	canonical	3	653	junction_6	41.6984412178681	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTCTTAAGAACCCT	NA	False	NA	7	True	AATAAA	-19	NA	57899740	57941212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522
Isoform_20874_63	chr11	+	4296	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-145	3636	-145	-3633	5prime_fragment	FALSE	canonical	3	629	junction_13	50.0992786002251	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTGGTCCGTTTCCT	NA	False	NA	13	True	AATATA	-19	NA	57899744	57949224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
Isoform_20876_14	chr11	+	7932	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-145	0	-145	0	intron_retention	FALSE	canonical	3	629	junction_13	50.0992786002251	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899744	57952860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
Isoform_20880_494	chr11	+	6762	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-145	0	-145	0	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899744	57952860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
Isoform_20881_27	chr11	+	6804	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-190	3	-190	0	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTGGTCTCCCA	NA	False	NA	14	True	AATAAA	-15	NA	57899699	57952857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
Isoform_2090_22	chr10	-	4713	13	ISM	ENSMUSG00000058298.11	ENSMUST00000237608.2	4882	14	435	-3	-45	3	3prime_fragment	FALSE	canonical	3	17	junction_3	8.05536398239638	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTCTGTGTGCTTCTA	NA	False	NA	-14	True	AATAAA	-44	NA	53506100	53412407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
Isoform_2093_7	chr10	-	1634	8	NIC	ENSMUSG00000058298.11	novel	2421	8	NA	NA	-53	3	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	12.5795428358579	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTTTCTAAAACTGCTC	NA	False	NA	NA	False	ATTAAA	-23	NA	53506108	53484930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_53485111_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
Isoform_20935_619	chr11	+	2167	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-130	-2	-130	2	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGTCTTTGCT	NA	False	NA	16	True	AATAAA	-21	NA	57994848	58009422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
Isoform_20937_124	chr11	+	2211	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-176	0	-176	0	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57994802	58009420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
Isoform_2094_6	chr10	-	1623	7	ISM	ENSMUSG00000058298.11	ENSMUST00000219838.3	4132	8	435	2337	-45	-2337	3prime_fragment	FALSE	canonical	3	32	junction_3	5.08811250749125	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTCTATGTCCTCCGT	NA	False	NA	NA	False	ATTAAA	-12	NA	53506100	53487270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
Isoform_20946_653	chr11	+	716	7	FSM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	7	-1	7	1	multi-exon	FALSE	canonical	3	1080	junction_1	114.661821603066	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCATTGAATTATTG	1488	False	NA	13	True	AGTAAA	-16	NA	58062493	58070392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
Isoform_20949_31	chr11	+	896	7	NIC	ENSMUSG00000020514.9	novel	722	7	NA	NA	4	-1	combination_of_known_junctions	TRUE	canonical	3	41	junction_2	483.207138698187	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTTTCATTGAATTAT	1485	False	NA	11	True	AGTAAA	-14	NA	58062490	58070390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_58062540_58062619_58062848_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
Isoform_20956_7	chr11	+	3526	2	FSM	ENSMUSG00000069874.8	ENSMUST00000108836.2	3459	2	-73	6	-53	2	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATAGATGTATTATTT	1521	False	NA	NA	False	AATAAA	-17	NA	58105780	58113599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58105997_58110289
Isoform_20960_96	chr11	+	1951	12	FSM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-105	14	-2	0	multi-exon	FALSE	canonical	0	0	junction_6	44.8549544883144	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGTGCTACAGATAT	7671	False	NA	14	True	AATAAA	-21	NA	58197892	58205439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_20965_39	chr11	+	2233	11	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	82	junction_1	26.5083005867973	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTATGCTTTGGTGCTAC	7671	False	NA	8	True	AATAAA	-15	NA	58197892	58205433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_20966_19	chr11	+	2313	10	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	82	junction_1	26.418755029031	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGTGCTACAGATAT	7680	False	NA	14	True	AATAAA	-21	NA	58197901	58205439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_20968_8	chr11	+	2447	10	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	82	junction_1	27.7666644435551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7672	False	NA	12	True	AATAAA	-19	NA	58197893	58205437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_20969_5	chr11	+	2531	9	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	82	junction_1	27.6710588883042	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTATGCTTTGGTGCTAC	7667	False	NA	8	True	AATAAA	-15	NA	58197888	58205433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_2097_8	chr10	-	5120	13	FSM	ENSMUSG00000003746.17	ENSMUST00000003843.16	5137	13	16	1	16	-1	multi-exon	TRUE	canonical	3	6	junction_11	2.28977194400568	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGTCTTGTCACTGT	5499	False	NA	NA	False	AATAAA	-18	NA	53951876	53780881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_53783660_53784038_53784155_53795253_53795427_53796138_53796359_53801525_53801642_53809587_53809682_53810984_53811109_53853118_53853214_53890510_53890592_53901809_53901926_53906793_53906891_53950511_53951367_53951621
Isoform_20970_5	chr11	+	3206	9	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	29	-3	intron_retention	FALSE	canonical	3	82	junction_1	29.1115848933032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTGGTGCTACAGA	7702	False	NA	11	True	AATAAA	-18	NA	58197923	58205436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_58198083_58198337_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_20974_35	chr11	+	1879	12	FSM	ENSMUSG00000037243.18	ENSMUST00000153510.9	1887	12	8	0	8	0	multi-exon	FALSE	canonical	0	0	junction_6	49.3946830209872	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGTGCTACAGATAT	7681	False	NA	14	True	AATAAA	-21	NA	58197902	58205439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_20975_15	chr11	+	2174	11	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	39	junction_1	35.6712769606023	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTGGTGCTACAGATA	7673	False	NA	13	True	AATAAA	-20	NA	58197894	58205438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_20976_10	chr11	+	2269	10	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	39	junction_1	36.8269225190243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7660	False	NA	12	True	AATAAA	-19	NA	58197881	58205437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_20979_373	chr11	+	3008	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	-32	1	-6	-1	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	437	False	NA	15	True	AATAAA	-16	NA	58221543	58238550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
Isoform_20982_139	chr11	+	2987	7	FSM	ENSMUSG00000013646.18	ENSMUST00000116376.9	3016	7	25	4	-1	-1	multi-exon	FALSE	canonical	3	32	junction_1	38.7101049110206	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	468	False	NA	15	True	AATAAA	-16	NA	58221574	58238550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58221629_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
Isoform_2099_5	chr10	-	4189	30	FSM	ENSMUSG00000038122.10	ENSMUST00000219385.2	4192	30	3	0	3	0	multi-exon	TRUE	non_canonical	1	5	junction_1	4.33496417374282	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGGCTTGATCTGTT	NA	False	NA	NA	False	NA	NA	NA	56104782	55924264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
Isoform_20990_8	chr11	+	3636	3	FSM	ENSMUSG00000107677.3	ENSMUST00000215071.2	2719	3	-1312	395	-1312	-395	multi-exon	FALSE	canonical	3	11	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCACTTTGTCTCTTTC	1835	False	NA	NA	False	AATAAA	-25	NA	58642247	58650102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58644171_58647616_58647657_58648429
Isoform_20992_19	chr11	+	4093	5	FSM	ENSMUSG00000072915.4	ENSMUST00000139337.3	4100	5	8	-1	8	1	multi-exon	FALSE	canonical	2	9	junction_4	6.04152298679729	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCGAGTGGGCCTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	58737991	58752783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58738086_58739471_58739529_58745085_58745213_58746886_58746980_58749061
Isoform_20994_32	chr11	+	3763	5	FSM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	21	82	21	-82	multi-exon	FALSE	canonical	3	20	junction_3	8.74642784226795	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTTCCATATGTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	58758062	58774032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58758136_58759640_58759833_58767519_58767647_58769601_58769695_58770754
Isoform_20995_9	chr11	+	3830	5	FSM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	12	24	12	-24	multi-exon	FALSE	canonical	3	20	junction_3	8.74642784226795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTAAAATGGCATTGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	58758053	58774090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58758136_58759640_58759833_58767519_58767647_58769601_58769695_58770754
Isoform_20997_11	chr11	+	3805	5	NNC	ENSMUSG00000020491.16	novel	3866	5	NA	NA	21	-85	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	14.8492424049175	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGTGTTCCATATG	NA	False	NA	NA	False	ATTAAA	-17	NA	58758062	58774029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_58758136_58759640_58759833_58767519_58767692_58769601_58769695_58770754
Isoform_20998_5	chr11	+	3872	5	NNC	ENSMUSG00000020491.16	novel	3866	5	NA	NA	21	-18	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	14.8492424049175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCATTGTCACTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	58758062	58774096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_58758136_58759640_58759833_58767519_58767692_58769601_58769695_58770754
Isoform_20999_9	chr11	+	2313	7	FSM	ENSMUSG00000020455.17	ENSMUST00000108810.10	2301	7	-12	0	10	0	multi-exon	FALSE	canonical	1	1	junction_3	38.6566078870525	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1676	False	NA	15	True	AATAAA	-15	NA	58868928	58882284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58878458_58878507_58879550_58879574_58879654_58879756_58881012
Isoform_21000_5	chr11	+	3580	4	ISM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	10	-1	10	0	intron_retention	FALSE	canonical	2	58	junction_2	14.4299072146089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1699	False	NA	15	True	AATAAA	-15	NA	58868951	58882284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550
Isoform_21001_80	chr11	+	3524	5	ISM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	-15	-1	8	0	intron_retention	FALSE	canonical	2	58	junction_2	15.6264999280069	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1674	False	NA	15	True	AATAAA	-15	NA	58868926	58882284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879654
Isoform_21003_276	chr11	+	2251	6	FSM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	1	-1	1	0	multi-exon	FALSE	canonical	2	58	junction_2	16.6781293915115	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1690	False	NA	15	True	AATAAA	-15	NA	58868942	58882284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879654_58879756_58881012
Isoform_21004_5	chr11	+	3216	6	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	34.8275752816644	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1675	False	NA	14	True	AATAAA	-14	NA	58868927	58882283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879654_58879756_58880061
Isoform_21007_6	chr11	+	824	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	11	-117	-5	3	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTGGGGTTGACTCTT	NA	False	NA	15	True	ATTAAA	-29	NA	59093325	59096831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
Isoform_21008_26	chr11	+	687	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	30	1	14	-1	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTGTCATTGTCTTCT	NA	False	NA	8	True	NA	NA	NA	59093344	59096713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
Isoform_21010_201	chr11	+	666	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	27	247	14	-1	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTGTCATTGTCTTCT	NA	False	NA	8	True	NA	NA	NA	59093344	59096713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
Isoform_21011_27	chr11	+	923	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	20	-3	7	3	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTTCAGACCTCTGGG	NA	False	NA	4	True	NA	NA	NA	59093337	59096963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
Isoform_21012_43	chr11	+	787	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	19	134	6	-2	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGACTTTTGGGGTTGA	NA	False	NA	10	True	ATTAAA	-24	NA	59093336	59096826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
Isoform_21013_14	chr11	+	581	3	NIC	ENSMUSG00000036860.15	novel	940	4	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	3	65	junction_1	260	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTGTCATTGTCTTCT	NA	False	NA	8	True	NA	NA	NA	59093345	59096713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_59093486_59095381_59095584_59096474
Isoform_21016_9	chr11	+	401	2	NIC	ENSMUSG00000036860.15	novel	757	4	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTGTCATTGTCTTCT	NA	False	NA	8	True	NA	NA	NA	59093323	59096713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_59093486_59096474
Isoform_21018_5	chr11	+	2495	2	NIC	ENSMUSG00000036860.15	novel	729	4	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	585	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCTGTCATTGTCTTC	NA	False	NA	7	True	NA	NA	NA	59093326	59096712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_59095584_59096474
Isoform_21021_101	chr11	+	1227	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	52	6	52	-6	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGAGTGTATATTAT	NA	False	NA	1	True	AGTAAA	-9	NA	59099198	59101558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
Isoform_21022_42	chr11	+	2071	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	47	-833	47	833	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAACAGCTCCAGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	59099193	59102397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
Isoform_21024_4	chr11	+	1341	6	NIC	ENSMUSG00000020441.7	novel	1285	7	NA	NA	14	-6	intron_retention	FALSE	canonical	3	128	junction_5	19.131126469709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGAGTGTATATTAT	NA	False	NA	1	True	AGTAAA	-9	NA	59099160	59101558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_59099500_59099645_59099692_59099794_59100027_59100133_59100220_59100798_59100931_59101052
Isoform_21025_4	chr11	+	1446	5	NIC	ENSMUSG00000020441.7	novel	1285	7	NA	NA	16	-6	intron_retention	FALSE	canonical	3	128	junction_4	18.8745860881769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGAGTGTATATTAT	NA	False	NA	1	True	AGTAAA	-9	NA	59099162	59101558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_59099500_59099645_59099692_59099794_59100220_59100798_59100931_59101052
Isoform_21026_9	chr11	+	3309	4	FSM	ENSMUSG00000000126.12	ENSMUST00000108783.4	3318	4	2	7	2	-7	multi-exon	FALSE	canonical	1	1	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCTAAGTCCGATGTTT	5620	False	NA	NA	False	AATAAA	-18	NA	59197757	59224371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59197894_59218389_59218647_59219327_59219591_59221718
Isoform_21027_11	chr11	+	1952	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	30	2369	30	-2	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGAGTTCCTTTTTTA	9511	False	NA	13	True	NA	NA	NA	59340900	59346930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
Isoform_21030_3	chr11	+	4303	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	44	4	-32	-4	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACCTGTAACCCCAGCAC	9525	False	NA	3	True	NA	NA	NA	59340914	59349295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
Isoform_21031_4	chr11	+	4014	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	2	343	2	-249	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCTTTGAAATAGAGAA	9483	False	NA	NA	False	AATAAA	-16	NA	59340872	59349050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
Isoform_21032_5	chr11	+	1659	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	12	2688	12	-227	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTCAGCCTCTTGTAGT	9493	False	NA	NA	False	NA	NA	NA	59340882	59346705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
Isoform_21033_10	chr11	+	1855	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	42	2462	-34	-1	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGGAGTTCCTTTTTTAT	9523	False	NA	14	True	NA	NA	NA	59340912	59346931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
Isoform_21036_4	chr11	+	5640	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	42	-1323	-34	1323	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	9523	False	NA	16	True	NA	NA	NA	59340912	59350716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
Isoform_21039_682	chr11	+	4129	24	FSM	ENSMUSG00000005417.18	ENSMUST00000116371.8	8766	24	1	4636	1	-5	multi-exon	FALSE	canonical	3	400	junction_2	48.3490381455828	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3586	False	NA	12	True	ATTAAA	-9	NA	59553333	59667044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
Isoform_2104_332	chr10	-	2800	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	72	8	19	-8	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAACGTGTGGTGGTA	NA	False	NA	NA	False	AATAAA	-8	NA	57408554	57391877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
Isoform_21041_251	chr11	+	4151	24	FSM	ENSMUSG00000005417.18	ENSMUST00000116371.8	8766	24	-21	4636	-9	-5	multi-exon	TRUE	canonical	3	400	junction_2	48.3490381455828	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3564	False	NA	12	True	ATTAAA	-9	NA	59553311	59667044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
Isoform_21045_21	chr11	+	4002	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	21	-4	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	108.552735023083	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCCCGGCCCCTCTCAT	3606	False	NA	13	True	ATTAAA	-10	NA	59553353	59667045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
Isoform_21051_11	chr11	+	3977	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	110.839732411224	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3586	False	NA	12	True	ATTAAA	-9	NA	59553333	59667044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
Isoform_2107_157	chr10	-	2836	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	36	8	-17	-8	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAACGTGTGGTGGTA	NA	False	NA	NA	False	AATAAA	-8	NA	57408590	57391877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
Isoform_21070_5	chr11	+	653	2	FSM	ENSMUSG00000087249.2	ENSMUST00000151825.2	771	2	-11	129	-11	-129	multi-exon	FALSE	canonical	1	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTAATGTCTTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	59700894	59709188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59701088_59708728
Isoform_21071_10	chr11	+	1271	5	FSM	ENSMUSG00000032615.15	ENSMUST00000149076.8	1316	5	45	0	45	0	multi-exon	FALSE	canonical	3	8	junction_1	25.0337272494529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	2690	False	NA	6	True	AATAAA	-16	NA	59730317	59767359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59730583_59743616_59743718_59751575_59751637_59765378_59765494_59766630
Isoform_21072_3	chr11	+	1382	5	FSM	ENSMUSG00000032615.15	ENSMUST00000149076.8	1316	5	-69	3	-69	-3	multi-exon	FALSE	canonical	3	8	junction_1	25.0337272494529	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTGTGCTGTGGCCTT	2576	False	NA	3	True	AATAAA	-13	NA	59730203	59767356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59730583_59743616_59743718_59751575_59751637_59765378_59765494_59766630
Isoform_21073_3	chr11	+	1219	4	NIC	ENSMUSG00000032615.15	novel	1316	5	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30.9443945740671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTGTGCTGTGGCCTTC	2639	False	NA	4	True	AATAAA	-14	NA	59730266	59767357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_59730583_59751575_59751637_59765378_59765494_59766630
Isoform_21074_33	chr11	+	1300	5	FSM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	6	0	6	0	multi-exon	FALSE	canonical	3	45	junction_1	9.12414379544733	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	1725	False	NA	6	True	AATAAA	-16	NA	59738904	59767359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765494_59766630
Isoform_21076_16	chr11	+	1337	5	FSM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	-32	1	-32	-1	multi-exon	FALSE	canonical	3	45	junction_1	9.12414379544733	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCTGTGGCCTTCT	1687	False	NA	5	True	AATAAA	-15	NA	59738866	59767358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765494_59766630
Isoform_21078_11	chr11	+	1186	5	FSM	ENSMUSG00000032615.15	ENSMUST00000137695.2	1387	5	200	1	200	-1	multi-exon	FALSE	canonical	2	6	junction_1	25.8976350271603	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCTGTGGCCTTCT	1950	False	NA	5	True	AATAAA	-15	NA	59739129	59767358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59739311_59743616_59743718_59751575_59751637_59765378_59765494_59766630
Isoform_21079_34	chr11	+	2918	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	38	-1036	38	1036	multi-exon	FALSE	canonical	3	425	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTAGAGATTTTGTTC	NA	False	NA	NA	False	AATAAA	-28	NA	59839069	59854067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59839305_59851384
Isoform_21080_118	chr11	+	1889	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	38	-7	38	7	multi-exon	FALSE	canonical	3	425	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTGTTGGCTCTGTCT	NA	False	NA	17	True	ATTAAA	-28	NA	59839069	59853038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59839305_59851384
Isoform_21081_175	chr11	+	800	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	38	1082	38	-1082	multi-exon	FALSE	canonical	3	425	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTGTTTTGAAAGGC	NA	False	NA	11	True	ATTAAA	-17	NA	59839069	59851949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59839305_59851384
Isoform_21083_4	chr11	+	7440	6	FSM	ENSMUSG00000062115.16	ENSMUST00000064190.13	7348	6	-93	1	-93	-1	multi-exon	FALSE	canonical	2	7	junction_1	5.67097875150313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGCGGCCTGTGGAT	NA	False	NA	NA	False	AATAAA	-19	NA	59995745	60090020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59996221_60031066_60031197_60075921_60081449_60084764_60084859_60088614_60088665_60088856
Isoform_21084_5	chr11	+	1903	5	FSM	ENSMUSG00000062115.16	ENSMUST00000149770.8	1823	5	-85	5	-85	-3	multi-exon	FALSE	canonical	1	6	junction_2	6.75925291729789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGTGTGCGGCCTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	59995753	60090018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_59996221_60031066_60031197_60084764_60084859_60088614_60088665_60088856
Isoform_21087_5	chr11	+	6971	5	FSM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	-53	3	-53	-1	multi-exon	FALSE	canonical	3	11	junction_1	3.69966214673719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGCGGCCTGTGGAT	NA	False	NA	NA	False	AATAAA	-19	NA	60066651	60090020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60066788_60075921_60081449_60084764_60084859_60088614_60088665_60088856
Isoform_21088_5	chr11	+	2513	8	FSM	ENSMUSG00000056598.17	ENSMUST00000094140.9	2438	8	-71	-4	-71	4	multi-exon	FALSE	canonical	2	6	junction_1	9.45235096552758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAAGGACTCTGTGGTTG	3350	False	NA	NA	False	NA	NA	NA	60244083	60268108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619
Isoform_21089_11	chr11	+	2033	14	NNC	ENSMUSG00000056598.17	novel	1917	14	NA	NA	-119	-3	at_least_one_novel_splicesite	FALSE	non_canonical	2	6	junction_1	7.40062367434196	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTGGTGTCAGTATT	3302	False	NA	NA	False	AATATA	-19	NA	60244035	60285164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619_60266732_60268634_60268811_60275039_60275172_60278118_60278190_60279638_60279763_60284522_60284655_60284950
Isoform_21092_780	chr11	+	4263	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	18	2	18	-2	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	780	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCCAATTTGTAAGTCA	NA	False	NA	25	True	AATAAA	-16	NA	60308105	60336101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
Isoform_21105_387	chr11	+	1742	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	12	34	12	-34	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGCGGGGAAGCGGTTC	NA	False	NA	6	True	NA	NA	NA	60345428	60359546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
Isoform_2111_35	chr10	-	2191	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	347	-6	347	6	multi-exon	FALSE	canonical	3	22	junction_1	10.8639169436269	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	-23	True	AATAAA	-21	NA	59057322	58999935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
Isoform_21113_667	chr11	+	3082	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	42	2606	42	1539	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTGTCTGATGCTGTG	NA	False	NA	14	True	AATAAA	-23	NA	60428845	60446732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
Isoform_21114_241	chr11	+	3424	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	-300	2606	-300	1539	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTGTCTGATGCTGTG	NA	False	NA	14	True	AATAAA	-23	NA	60428503	60446732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
Isoform_21128_168	chr11	+	5662	5	NNC	ENSMUSG00000042650.4	novel	5730	4	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	172.863204586748	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCACCTGTTTGAGTTT	NA	False	NA	2	True	NA	NA	NA	60428849	60449336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063_60448510_60448529
Isoform_21130_63	chr11	+	6005	5	NNC	ENSMUSG00000042650.4	novel	5730	4	NA	NA	-299	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	172.863204586748	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCACCTGTTTGAGT	NA	False	NA	0	True	NA	NA	NA	60428504	60449334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063_60448510_60448529
Isoform_21135_15	chr11	+	5733	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	-9	6	-9	-6	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAATTTCACCTGTTTGA	NA	False	NA	-2	True	NA	NA	NA	60428794	60449332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
Isoform_21138_273	chr11	+	4278	22	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-40	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	70.2129252722278	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590630	60605007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603924_60603948
Isoform_21139_242	chr11	+	4386	22	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	70.2129252722278	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590522	60605007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603924_60603948
Isoform_2114_51	chr10	-	3748	9	ISM	ENSMUSG00000019917.11	ENSMUST00000220156.2	1821	10	349	22487	349	6	5prime_fragment	FALSE	canonical	3	43	junction_1	6.39824194603486	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	-23	True	AATAAA	-21	NA	59057320	58999935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
Isoform_21140_61	chr11	+	4444	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	-181	5	-59	-5	multi-exon	FALSE	canonical	3	223	junction_6	33.7192452465947	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590489	60605007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
Isoform_21148_32	chr11	+	4324	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	-26	5	-26	-5	multi-exon	FALSE	canonical	3	67	junction_21	57.9955428735457	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590522	60605007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
Isoform_21149_68	chr11	+	4218	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	80	5	-42	-5	multi-exon	FALSE	canonical	3	67	junction_21	57.9955428735457	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590628	60605007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
Isoform_2115_4	chr10	-	4048	9	ISM	ENSMUSG00000019917.11	ENSMUST00000220156.2	1821	10	49	22487	49	6	5prime_fragment	FALSE	canonical	3	43	junction_1	6.39824194603486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	-23	True	AATAAA	-21	NA	59057620	58999935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
Isoform_21164_18	chr11	+	2789	2	ISM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	49	1	2	-1	intron_retention	FALSE	canonical	3	155	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTGTAATTCTTGCT	NA	False	NA	13	True	AATAAA	-16	NA	60619272	60623776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_60619394_60621108
Isoform_21165_62	chr11	+	2519	4	NIC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	59.6713219785406	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619273	60623777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_60619394_60621108_60621262_60621408_60621619_60621741
Isoform_21167_398	chr11	+	2469	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	53	0	6	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619276	60623777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
Isoform_21169_6	chr11	+	2619	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	-97	0	-97	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619126	60623777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
Isoform_2117_206	chr10	-	2856	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	15	1	-2	-1	multi-exon	FALSE	canonical	3	91	junction_7	16.9957977999605	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGGCATCTCGTTCTTT	5645	False	NA	-2	True	AATAAA	-19	NA	59452499	59282806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
Isoform_21170_6	chr11	+	2364	3	NIC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	76.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619218	60623777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_60619394_60621108_60621262_60621741
Isoform_21171_96	chr11	+	2717	3	FSM	ENSMUSG00000018599.6	ENSMUST00000154890.2	716	3	-46	-1955	-1	0	multi-exon	FALSE	canonical	3	114	junction_2	20.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619222	60623777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60619394_60621108_60621619_60621741
Isoform_21176_47	chr11	+	7372	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	9	10	9	-10	multi-exon	FALSE	canonical	3	54	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTGGCATCTGGGTTCC	NA	False	NA	3	True	AATAAA	-11	NA	60668359	60679103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60671208_60674579
Isoform_2118_72	chr10	-	2911	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	-40	1	-40	-1	multi-exon	FALSE	canonical	3	91	junction_7	16.9957977999605	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGGCATCTCGTTCTTT	5590	False	NA	-2	True	AATAAA	-19	NA	59452554	59282806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
Isoform_21180_4	chr11	+	3085	6	ISM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	39	294	-9	-294	intron_retention	FALSE	canonical	3	194	junction_1	27.7012635090893	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAGAGTTCACAGTAGAA	NA	False	NA	17	True	AATAAA	-14	NA	60721495	60748955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525
Isoform_21182_248	chr11	+	1228	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	48	277	0	-277	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	34	True	AATAAA	-31	NA	60721504	60748972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
Isoform_21183_8	chr11	+	1305	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	-29	277	-29	-277	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	34	True	AATAAA	-31	NA	60721427	60748972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
Isoform_21184_6	chr11	+	1480	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	48	25	0	-25	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCTATTCATCCTACC	NA	False	NA	NA	False	NA	NA	NA	60721504	60749224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
Isoform_21185_4	chr11	+	1168	6	NIC	ENSMUSG00000042569.14	novel	1553	7	NA	NA	14	-278	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	104.781677787674	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAACCATGTACAGGTC	NA	False	NA	33	True	AATAAA	-30	NA	60721470	60748971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60746525_60746679_60748543
Isoform_21186_738	chr11	+	2141	12	FSM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	25	32	4	-15	multi-exon	FALSE	canonical	3	361	junction_6	27.3405217988137	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60822883	60843605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
Isoform_2119_4	chr10	-	2740	8	NNC	ENSMUSG00000009647.14	novel	2872	8	NA	NA	-39303	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	41.1354159937589	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGGCATCTCGTTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	59333285	59282807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59333246
Isoform_21191_21	chr11	+	2091	11	FSM	ENSMUSG00000018932.10	ENSMUST00000130269.2	2096	11	-10	15	2	-15	multi-exon	FALSE	canonical	2	10	junction_6	128.562980674843	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60822881	60843605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
Isoform_21192_16	chr11	+	2190	12	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	3	-14	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	124.270432910921	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCGT	NA	False	NA	NA	False	NA	NA	NA	60822882	60843606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_60823098_60832705_60832773_60833130_60833227_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
Isoform_21201_41	chr11	+	2579	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-289	1	-289	-1	multi-exon	FALSE	canonical	3	70	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCTTGCTCTTCTGTT	NA	False	NA	29	True	AATAAA	-41	NA	60913100	60961956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60913677_60959953
Isoform_21202_87	chr11	+	2288	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	2	1	2	-1	multi-exon	FALSE	canonical	3	70	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCTTGCTCTTCTGTT	NA	False	NA	29	True	AATAAA	-41	NA	60913391	60961956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60913677_60959953
Isoform_21207_35	chr11	+	4400	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	27	-2136	27	2136	multi-exon	FALSE	canonical	3	70	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTGTGTTGAGATG	NA	False	NA	5	True	ATTAAA	-19	NA	60913416	60964093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60913677_60959953
Isoform_21208_23	chr11	+	2716	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-426	1	-426	-1	multi-exon	FALSE	canonical	3	70	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCTTGCTCTTCTGTT	NA	False	NA	29	True	AATAAA	-41	NA	60912963	60961956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60913677_60959953
Isoform_21209_26	chr11	+	2622	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-332	1	-332	-1	multi-exon	FALSE	canonical	3	70	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCTTGCTCTTCTGTT	NA	False	NA	29	True	AATAAA	-41	NA	60913057	60961956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60913677_60959953
Isoform_21213_10	chr11	+	4743	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-315	-2137	-315	2137	multi-exon	FALSE	canonical	3	70	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTACTGTGTTGAGATGT	NA	False	NA	6	True	ATTAAA	-20	NA	60913074	60964094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60913677_60959953
Isoform_21214_11	chr11	+	4720	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-292	-2137	-292	2137	multi-exon	FALSE	canonical	3	70	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTACTGTGTTGAGATGT	NA	False	NA	6	True	ATTAAA	-20	NA	60913097	60964094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60913677_60959953
Isoform_21216_10	chr11	+	2195	3	FSM	ENSMUSG00000010142.13	ENSMUST00000137832.8	764	3	-1	-1430	-1	-9	multi-exon	FALSE	canonical	1	2	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTTGCATACAGTATGC	NA	False	NA	NA	False	AATAAA	-22	NA	61033285	61040189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_61033356_61037666_61037844_61038241
Isoform_21217_4	chr11	+	1233	9	ISM	ENSMUSG00000019102.11	ENSMUST00000019246.4	1729	11	4856	10	4856	-10	3prime_fragment	TRUE	canonical	2	6	junction_2	5.14629721255973	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGTCGTGCATGCAA	NA	False	NA	NA	False	AATAAA	-11	NA	61104426	61109237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
Isoform_21218_45	chr11	+	794	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	18	5	18	-5	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTGGGGCCTTCATT	NA	False	NA	18	True	AATAAA	-18	NA	61395987	61403752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
Isoform_21219_196	chr11	+	768	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	46	3	-13	-3	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTGGGGCCTTCATTTC	NA	False	NA	20	True	AATAAA	-20	NA	61396015	61403754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
Isoform_21220_4	chr11	+	581	7	NNC	ENSMUSG00000001039.13	novel	817	7	NA	NA	-6	4013	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	127.20019217316	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCAAGTTGCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	61396022	61407770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61407673
Isoform_21221_15	chr11	+	3084	6	NIC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	-4	-1742	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.9293765408777	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCCACAGTGTCCTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	61574912	61599035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_61574995_61575278_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
Isoform_21223_34	chr11	+	3007	5	FSM	ENSMUSG00000042377.9	ENSMUST00000093019.6	4778	5	27	1744	27	-1744	multi-exon	FALSE	canonical	3	16	junction_3	2.38484800354236	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGCCCACAGTGTCCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	61575271	61599033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
Isoform_21224_10	chr11	+	4762	5	FSM	ENSMUSG00000042377.9	ENSMUST00000093019.6	4778	5	13	3	13	-3	multi-exon	FALSE	canonical	3	16	junction_3	2.38484800354236	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAGTGTTGTCATTGA	NA	False	NA	NA	False	AATAAA	-25	NA	61575257	61600774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
Isoform_21226_10	chr11	+	3855	7	NNC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	13	1196	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	9.58152156786987	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTGGTTTGAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	61967897	62030545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875_62029162_62029185
Isoform_21227_6	chr11	+	3947	6	NIC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	7	1198	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	7.07106781186548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGGTTTGAATTTTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	61967831	62030547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
Isoform_21228_3	chr11	+	5949	6	NIC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	7.07106781186548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATTGGATATTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	61967831	62032549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
Isoform_21229_6	chr11	+	3616	13	FSM	ENSMUSG00000042331.14	ENSMUST00000202179.2	6676	13	-25	3085	13	-36	multi-exon	FALSE	canonical	0	0	junction_10	9.09326673973661	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAACGCAGCTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	61967897	62110754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62102469_62102530_62110110
Isoform_2123_1803	chr10	-	1749	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	1	5	1	-5	multi-exon	FALSE	canonical	3	721	junction_1	4.5	1803	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTGAGTCTCATCGG	NA	False	NA	-9	True	AATAAA	-12	NA	59787655	59785495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_59786852_59787138_59787395_59787518
Isoform_21230_4	chr11	+	3674	13	FSM	ENSMUSG00000042331.14	ENSMUST00000202179.2	6676	13	-78	3080	20	-31	multi-exon	FALSE	canonical	0	0	junction_10	9.09326673973661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGCAGCTTTTGCCTCT	NA	False	NA	NA	False	AATAAA	-25	NA	61967844	62110759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62102469_62102530_62110110
Isoform_21231_18	chr11	+	1835	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	12	-2	12	2	multi-exon	FALSE	canonical	3	17	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCACTGGCTTCTTGCACT	8735	False	NA	NA	False	AATAAA	-22	NA	62139821	62157281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62140263_62155887
Isoform_21232_9	chr11	+	1516	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	-13	342	-13	-342	multi-exon	FALSE	canonical	3	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTTCCTGGGGCAG	8710	False	NA	NA	False	AATAAA	-18	NA	62139796	62156937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62140263_62155887
Isoform_21234_125	chr11	+	2267	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-34	1177	-23	3	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTATGGATTCTAATAAT	NA	False	NA	19	True	AATAAA	-15	NA	62172275	62206075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
Isoform_21235_38	chr11	+	3443	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-34	1	-23	-1	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCAAATGTCTGTCTT	NA	False	NA	13	True	NA	NA	NA	62172275	62207251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
Isoform_21243_4	chr11	+	3375	9	FSM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	-3	-1179	-3	-1	multi-exon	FALSE	canonical	3	16	junction_3	62.3493183603478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCAAATGTCTGTCTT	NA	False	NA	13	True	NA	NA	NA	62172304	62207251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
Isoform_21244_9	chr11	+	2228	9	FSM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	-32	-3	-23	3	multi-exon	FALSE	canonical	3	16	junction_3	62.3493183603478	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTATGGATTCTAATAAT	NA	False	NA	19	True	AATAAA	-15	NA	62172275	62206075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
Isoform_21245_7	chr11	+	3976	9	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-23	4	intron_retention	FALSE	canonical	3	154	junction_3	25.45308183698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGGATTCTAATAATC	NA	False	NA	20	True	AATAAA	-16	NA	62172275	62206076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
Isoform_21246_4	chr11	+	5156	9	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-23	4	intron_retention	FALSE	canonical	3	154	junction_3	25.45308183698	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGTCTGTCTTTCTTA	NA	False	NA	18	True	NA	NA	NA	62172275	62207256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
Isoform_21248_11	chr11	+	1970	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	-7	211	-7	-211	multi-exon	TRUE	canonical	3	156	junction_1	58.9736287580211	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAATATGGGAA	NA	False	NA	NA	False	AATACA	-37	NA	62349278	62405032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
Isoform_21254_15	chr11	+	1580	2	ISM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	53233	513	53085	-513	3prime_fragment	FALSE	canonical	3	316	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	25	True	AATAAA	-29	NA	62402518	62404730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_62403098_62403729
Isoform_21257_18255	chr11	+	1163	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	335	1	-170	-1	multi-exon	FALSE	canonical	3	35417	junction_1	0	18255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	24	True	AATAAA	-23	NA	62442331	62444038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62442422_62442965
Isoform_21264_16	chr11	+	2683	15	ISM	ENSMUSG00000018507.17	ENSMUST00000018651.14	2909	16	1383	216	-204	0	3prime_fragment	FALSE	canonical	1	1	junction_1	4.86553896169326	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCAAGTCTTCTAGAAG	8124	False	NA	9	True	TATAAA	-11	NA	62466746	62491125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_62466952_62469128_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
Isoform_21268_1530	chr11	+	464	5	FSM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	0	-2	0	2	multi-exon	FALSE	canonical	3	3662	junction_1	404.852056311932	1530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493702	62495635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495480
Isoform_21277_3	chr11	+	1737	2	FSM	ENSMUSG00000048497.12	ENSMUST00000062860.5	343	2	99	-1493	-50	-2	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGAGTCTGTGTCTGG	NA	False	NA	0	True	NA	NA	NA	62539588	62557178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62539643_62555495
Isoform_21279_11	chr11	+	1720	2	FSM	ENSMUSG00000048497.12	ENSMUST00000155759.3	589	2	-13	-1118	2	0	multi-exon	FALSE	canonical	3	16	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	2	True	NA	NA	NA	62539647	62557180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62539683_62555495
Isoform_21280_8	chr11	+	3599	7	NIC	ENSMUSG00000047821.17	novel	3574	7	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	12.7017059221718	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATTTTTTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	62711260	62733756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_62711464_62711560_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
Isoform_21282_35	chr11	+	3899	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	1	6	1	-6	multi-exon	TRUE	canonical	3	37	junction_4	2.33238075793812	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATTTTTTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	62711057	62733756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
Isoform_21284_44	chr11	+	3699	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	201	6	-8	-6	multi-exon	FALSE	canonical	3	37	junction_4	2.33238075793812	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATTTTTTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	62711257	62733756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
Isoform_21290_138	chr11	+	1737	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	47	0	12	0	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9288	False	NA	10	True	TATAAA	-18	NA	62770327	62786011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
Isoform_21297_12	chr11	+	1786	7	NIC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	-44	-4	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	171.994831963702	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTAGATGTGTGGTCC	9356	False	NA	6	True	TATAAA	-14	NA	62770395	62786007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_62770543_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
Isoform_21301_17	chr11	+	877	2	FSM	ENSMUSG00000087497.8	ENSMUST00000135037.8	901	2	24	0	24	0	multi-exon	FALSE	canonical	3	11	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCATGTTTCTTA	4258	False	NA	NA	False	AATAAA	-22	NA	63970333	63974085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_63970604_63973478
Isoform_21302_844	chr11	+	2904	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	-17	-3	-14	3	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCAGTGTGGGGTCTTC	NA	False	NA	18	True	AATAAA	-18	NA	64869882	64892429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
Isoform_21303_52	chr11	+	3360	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	-6	-470	-3	1	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACAACAGTTTGTAC	NA	False	NA	11	True	AATAAA	-19	NA	64869893	64892896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
Isoform_21306_174	chr11	+	2739	25	FSM	ENSMUSG00000020549.15	ENSMUST00000071891.12	2771	25	30	2	-3	0	multi-exon	FALSE	canonical	3	56	junction_24	61.5767221304718	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCTTGACAACAGTTTG	NA	False	NA	8	True	AATAAA	-16	NA	64869893	64892893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820_64892040_64892657
Isoform_2131_13	chr10	-	1370	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	9	0	9	0	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59838924	59823729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
Isoform_21314_19	chr11	+	2290	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	-10	-10	-10	9	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGCCTTGTTCACTGTG	NA	False	NA	24	True	AATAAA	-30	NA	65697990	65720074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
Isoform_21316_31	chr11	+	2227	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	44	-1	-25	0	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTGTAGCTGCCTTG	NA	False	NA	15	True	AATAAA	-21	NA	65698044	65720065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
Isoform_21318_12	chr11	+	2255	7	NNC	ENSMUSG00000018347.17	novel	2302	8	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_5	10.077477638554	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTGTAGCTGCCTTG	NA	False	NA	15	True	AATAAA	-21	NA	65698013	65720065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713653_65713765_65718867
Isoform_21322_44	chr11	+	4165	3	NNC	ENSMUSG00000048070.5	novel	4200	2	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.5	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTCAGAAGTGTGTTT	NA	False	NA	4	True	AATAAA	-14	NA	66802818	66820703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_66802969_66816664_66818954_66818977
Isoform_21325_5	chr11	+	4274	4	NNC	ENSMUSG00000048070.5	novel	4200	2	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.471404520791032	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGTTCAGAAGTGTGTT	NA	False	NA	3	True	AATAAA	-13	NA	66802815	66820702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_66802969_66814342_66814450_66816664_66818954_66818977
Isoform_21326_7	chr11	+	1764	2	ISM	ENSMUSG00000050270.13	ENSMUST00000079077.12	1147	7	2	7234	2	-7234	intron_retention	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	3920	False	NA	NA	False	AATACA	-38	NA	66915981	66918382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_66916098_66916734
Isoform_21328_19	chr11	+	1554	8	NNC	ENSMUSG00000050270.13	novel	1597	6	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	10.4588601244132	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGGGGAGAATTACT	3921	False	NA	NA	False	NA	NA	NA	66915982	66926142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934_66925764_66925783_66925890_66925913
Isoform_21331_368	chr11	+	1748	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	0	664	0	-423	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCATGGCTTTGCTTCTG	NA	False	NA	15	True	AATAAA	-27	NA	66943495	66955734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
Isoform_21332_36	chr11	+	2418	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	-17	11	-17	-11	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTGGTACTTACATGA	NA	False	NA	3	True	AATAAA	-21	NA	66943478	66956387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
Isoform_21337_13	chr11	+	2843	17	ISM	ENSMUSG00000020908.15	ENSMUST00000108689.8	6031	41	15138	1	15138	-1	3prime_fragment	FALSE	canonical	2	11	junction_1	5.51949669354009	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGTTTTGTCTTG	NA	False	NA	5	True	AATAAA	-16	NA	66984263	66993111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
Isoform_21338_8	chr11	+	2929	16	NIC	ENSMUSG00000020908.15	novel	5992	40	NA	NA	15131	-2	intron_retention	TRUE	canonical	2	13	junction_1	5.25187797099497	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGGTTTGTTTTGTCTT	NA	False	NA	4	True	AATAAA	-15	NA	66984256	66993110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
Isoform_21339_6	chr11	+	3639	15	NIC	ENSMUSG00000020908.15	novel	5992	40	NA	NA	15138	-1	intron_retention	FALSE	canonical	2	13	junction_2	5.09351328171631	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGTTTTGTCTTG	NA	False	NA	5	True	AATAAA	-16	NA	66984263	66993111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
Isoform_2134_72	chr10	-	1276	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	77	499	28	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59838880	59823729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
Isoform_21343_152	chr11	+	4009	25	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17702	-86	17702	2	3prime_fragment	FALSE	canonical	3	52	junction_14	14.9210887300119	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGCTCTGCTGTGTTTG	NA	False	NA	24	True	AATAAA	-20	NA	67235630	67262414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
Isoform_21345_6	chr11	+	4200	25	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17702	-277	17702	193	3prime_fragment	FALSE	canonical	3	52	junction_14	14.9210887300119	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGAGAGCATTTGCCTG	NA	False	NA	NA	False	AATAAA	-23	NA	67235630	67262605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
Isoform_21346_9	chr11	+	3900	24	NIC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17705	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_21	20.5284624211406	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGCTCTGCTGTGTTT	NA	False	NA	23	True	AATAAA	-19	NA	67235633	67262413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67260134_67260231_67261745_67261881_67262313
Isoform_21351_9	chr11	+	3462	14	FSM	ENSMUSG00000033066.18	ENSMUST00000108681.9	1941	14	-11	-1510	-11	-4	multi-exon	FALSE	canonical	1	4	junction_8	3.36357093985776	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGCTAGTGGTAATTTG	1112	False	NA	1	True	ATTAAA	-10	NA	67345905	67575796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
Isoform_21352_7	chr11	+	1520	3	FSM	ENSMUSG00000020903.14	ENSMUST00000108675.2	1497	3	-22	-1	-11	1	multi-exon	FALSE	canonical	3	260	junction_1	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGGGGGCCTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	67857283	67865418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_67857344_67860597_67860698_67864058
Isoform_21353_7	chr11	+	1650	5	FSM	ENSMUSG00000020903.14	ENSMUST00000021286.11	1638	5	-10	-2	-10	2	multi-exon	FALSE	canonical	3	5	junction_4	126.986957991756	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGAGTGTTGTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	67857284	67878435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67877150
Isoform_21354_217	chr11	+	845	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	281	3268	5	110	multi-exon	FALSE	canonical	3	260	junction_1	20.1626043021455	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTACCTTGTTTG	NA	False	NA	18	True	AATAAA	-18	NA	67857299	68094706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
Isoform_21360_4	chr11	+	4316	28	ISM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	174	17843	8	8550	5prime_fragment	FALSE	canonical	3	123	junction_6	18.9430595779256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGGTGTCTTTCTCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	68582914	68689615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075
Isoform_21367_81	chr11	+	7523	41	FSM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	180	88	14	0	multi-exon	FALSE	canonical	3	123	junction_6	27.8530855561821	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCGCCTGCTCTGTTTAC	NA	False	NA	-77	True	AATAAA	-18	NA	68582920	68707370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
Isoform_21369_30	chr11	+	7617	41	FSM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	167	7	1	1	multi-exon	TRUE	canonical	3	123	junction_6	27.8530855561821	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCTGCTTCCGCA	NA	False	NA	4	True	AATAAA	-18	NA	68582907	68707451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
Isoform_2137_13	chr10	-	1817	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	33	2	9	-2	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTCAGGAGTTGAAACTA	NA	False	NA	0	True	AATAAA	-26	NA	59838924	59823232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
Isoform_21390_3846	chr11	+	522	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	6	-2	6	2	multi-exon	FALSE	canonical	3	13360	junction_1	1585.12172683642	3846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTTGTGTGGTGTTTT	NA	False	NA	35	True	ATTAAA	-16	NA	68792414	68795362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
Isoform_21396_126	chr11	+	670	4	NIC	ENSMUSG00000060938.15	novel	500	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	269	junction_1	7467.32754515741	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTGTGTGGTGTT	NA	False	NA	33	True	ATTAAA	-14	NA	68792452	68795360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_68792639_68793095_68793269_68794004_68794146_68795190
Isoform_2140_4	chr10	-	6175	3	NIC	ENSMUSG00000057337.14	novel	6108	4	NA	NA	-219	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGTAGTGGTTATT	NA	False	NA	NA	False	AATGAA	-8	NA	60055301	60017352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_60022706_60023894_60024141_60054725
Isoform_21403_45	chr11	+	1787	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	40	1	23	-1	multi-exon	FALSE	canonical	3	33	junction_2	4.96865172858795	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAAGTGTCTTATGTTT	5598	False	NA	5	True	CATAAA	-17	NA	68858996	68863341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
Isoform_21404_4	chr11	+	3668	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	11	-1851	-5	2	multi-exon	FALSE	canonical	3	33	junction_2	4.96865172858795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTTAGAGTGTTCTTT	5569	False	NA	NA	False	ATTAAA	-19	NA	68858967	68865193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
Isoform_21410_162	chr11	+	3986	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	-8	0	3	0	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5264	False	NA	18	True	AATAAA	-18	NA	68906914	68927296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_21411_382	chr11	+	3961	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	17	0	17	0	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_21415_225	chr11	+	3960	23	FSM	ENSMUSG00000020898.19	ENSMUST00000021278.14	4164	23	201	3	15	0	multi-exon	FALSE	canonical	3	209	junction_14	54.4241833704208	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5287	False	NA	18	True	AATAAA	-18	NA	68906937	68927296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_21417_18	chr11	+	4136	23	FSM	ENSMUSG00000020898.19	ENSMUST00000021278.14	4164	23	25	3	10	0	multi-exon	FALSE	canonical	3	209	junction_14	54.4241833704208	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5111	False	NA	18	True	AATAAA	-18	NA	68906761	68927296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_21422_24	chr11	+	3749	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	97.9944697407626	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_21423_28	chr11	+	3746	22	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	98.8413373914187	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_21424_54	chr11	+	3933	23	FSM	ENSMUSG00000020898.19	ENSMUST00000152979.8	3976	23	40	3	-8	0	multi-exon	FALSE	canonical	3	48	junction_2	94.2205957376466	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5301	False	NA	18	True	AATAAA	-18	NA	68906951	68927296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_21425_30	chr11	+	3942	23	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	95.0498890318062	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_2143_61	chr10	-	5266	6	FSM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	-26	0	-14	0	multi-exon	FALSE	canonical	3	34	junction_2	5.08330601085553	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTGGTGTCTCCATT	NA	False	NA	-5	True	AATAAA	-21	NA	60588587	60547850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_60552270_60556639_60556803_60559542_60559770_60566348_60566432_60586164_60586464_60588512
Isoform_21443_78	chr11	+	1798	9	FSM	ENSMUSG00000020897.13	ENSMUST00000108666.8	1831	9	32	1	8	-1	multi-exon	FALSE	canonical	3	35	junction_1	202.492592457107	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGGTGGTCTGAATA	NA	False	NA	15	True	AATAAA	-25	NA	68936504	68942489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68936637_68936760_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
Isoform_21445_53	chr11	+	2005	8	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	0	-4	intron_retention	FALSE	canonical	3	10	junction_1	225.027889427973	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATACTGTGGTGGTCTGA	NA	False	NA	12	True	AATAAA	-22	NA	68936477	68942486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_68936835_68938551_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
Isoform_21447_2096	chr11	+	1922	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	27	1	8	-1	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGGTGGTCTGAATA	NA	False	NA	15	True	AATAAA	-25	NA	68936504	68942489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
Isoform_21448_139	chr11	+	1962	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	-13	1	-8	-1	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGGTGGTCTGAATA	NA	False	NA	15	True	AATAAA	-25	NA	68936464	68942489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
Isoform_21458_5	chr11	+	984	4	FSM	ENSMUSG00000020895.15	ENSMUST00000094081.5	1263	4	13	266	11	3	multi-exon	FALSE	canonical	3	354	junction_2	22.0655588845805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGGCGTATACTATT	4665	False	NA	NA	False	AATAAA	-16	NA	68961649	68963853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248
Isoform_21459_103	chr11	+	758	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	21	0	14	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4668	False	NA	NA	False	AATAAA	-19	NA	68961652	68963856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
Isoform_21463_22	chr11	+	2767	4	FSM	ENSMUSG00000020894.17	ENSMUST00000117780.2	1113	4	40	-1694	7	0	multi-exon	FALSE	canonical	3	124	junction_1	8.17856276425687	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	68979375	68983210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801
Isoform_21464_5	chr11	+	2717	5	NNC	ENSMUSG00000020894.17	novel	2205	5	NA	NA	32	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	57.4516100731738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCCAAAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	68979400	68983209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68981413_68981436
Isoform_21465_117	chr11	+	2165	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	40	0	8	0	multi-exon	FALSE	canonical	3	85	junction_4	21.4126131053639	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	68979355	68983210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
Isoform_21466_7	chr11	+	664	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	-2	1543	-2	151	multi-exon	FALSE	canonical	3	85	junction_4	21.4126131053639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTCTGTTTGTAGTTT	NA	False	NA	7	True	NA	NA	NA	68979313	68981667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
Isoform_21468_4	chr11	+	2944	4	NNC	ENSMUSG00000020894.17	novel	1113	4	NA	NA	5	-1	intron_retention	FALSE	canonical	3	15	junction_2	52.3513769319076	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCCAAAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	68979352	68983209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_68979454_68979931_68980053_68980401_68980716_68980801
Isoform_21469_18	chr11	+	3271	3	NIC	ENSMUSG00000020894.17	novel	2205	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	124	junction_1	2	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	68979375	68983210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_68979454_68979931_68980716_68980801
Isoform_21471_32	chr11	+	3323	18	FSM	ENSMUSG00000020893.18	ENSMUST00000101004.9	3507	18	20	164	20	-2	multi-exon	FALSE	canonical	3	14	junction_5	5.21177798431451	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGATTCTTCCCCG	NA	False	NA	10	True	AATAAA	-16	NA	68986062	68997120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68986130_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
Isoform_21472_3	chr11	+	3471	17	NIC	ENSMUSG00000020893.18	novel	3507	18	NA	NA	32	-3	intron_retention	FALSE	canonical	3	14	junction_5	5.26634360823522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCTGTGATTCTTCCCC	NA	False	NA	9	True	AATAAA	-15	NA	68986074	68997119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_68986130_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
Isoform_21473_26	chr11	+	3312	18	ISM	ENSMUSG00000020893.18	ENSMUST00000021271.14	4671	23	5	3666	5	-2	5prime_fragment	FALSE	canonical	3	10	junction_1	5.84636047433339	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGATTCTTCCCCG	NA	False	NA	10	True	AATAAA	-16	NA	68989778	68997120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_68989835_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
Isoform_21475_3	chr11	+	2374	15	FSM	ENSMUSG00000032807.6	ENSMUST00000036424.3	2431	15	56	1	56	-1	multi-exon	FALSE	canonical	0	0	junction_2	11.3227241259625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGTCTGAGAACGTGGG	1961	False	NA	6	True	AATAAA	-17	NA	69047870	69060617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69048220_69049099_69049305_69053493_69053576_69053718_69053812_69053946_69054070_69054333_69054438_69054752_69054926_69055157_69055302_69056676_69056881_69057055_69057143_69057599_69057770_69058181_69058304_69059603_69059705_69060043_69060215_69060371
Isoform_21476_8	chr11	+	555	4	ISM	ENSMUSG00000032807.6	ENSMUST00000036424.3	2431	15	10452	1	10452	-1	3prime_fragment	FALSE	canonical	3	17	junction_3	8.17856276425687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGTCTGAGAACGTGGG	NA	False	NA	6	True	AATAAA	-17	NA	69058266	69060617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_69058304_69059603_69059705_69060043_69060215_69060371
Isoform_21477_127	chr11	+	744	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	7	0	7	0	multi-exon	FALSE	canonical	3	239	junction_1	97.8682149627753	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214812	69216619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
Isoform_21479_63	chr11	+	747	4	FSM	ENSMUSG00000049299.15	ENSMUST00000102601.10	759	4	12	0	0	0	multi-exon	FALSE	canonical	3	452	junction_2	10.7082522694727	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214900	69216619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216264
Isoform_21481_46	chr11	+	2520	14	FSM	ENSMUSG00000018470.9	ENSMUST00000018614.3	2538	14	12	6	12	-6	multi-exon	FALSE	canonical	3	22	junction_1	7.85293824331087	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGACCACGTCTGAA	NA	False	NA	5	True	AATAAA	-14	NA	69217095	69223862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
Isoform_21483_9	chr11	+	1293	3	NIC	ENSMUSG00000018470.9	novel	750	7	NA	NA	1024	-6	intron_retention	FALSE	canonical	3	49	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGACCACGTCTGAA	NA	False	NA	5	True	AATAAA	-14	NA	69222173	69223862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69222407_69222561_69222651_69222891
Isoform_21484_11	chr11	+	2090	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	-10	1	-10	-1	multi-exon	FALSE	canonical	3	42	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTGAAAGACTGTTATT	NA	False	NA	9	True	AATAAA	-18	NA	69231276	69233466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69231885_69231984
Isoform_21486_44	chr11	+	1744	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	336	1	-12	-1	multi-exon	FALSE	canonical	3	42	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTGAAAGACTGTTATT	NA	False	NA	9	True	AATAAA	-18	NA	69231622	69233466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69231885_69231984
Isoform_21488_6	chr11	+	549	3	NIC	ENSMUSG00000059278.10	novel	671	3	NA	NA	-17	-8	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	615.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAAGTGGCCTGTGTCTGT	NA	False	NA	9	True	ATTAAA	-9	NA	69286295	69287498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69286508_69287002_69287187_69287345
Isoform_21489_204	chr11	+	514	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	152	5	-15	-5	multi-exon	FALSE	canonical	3	948	junction_1	166	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCCTGTGTCTGTGTG	NA	False	NA	12	True	ATTAAA	-12	NA	69286624	69287501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69286799_69287002_69287187_69287345
Isoform_21490_44	chr11	+	544	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	122	5	-45	-5	multi-exon	FALSE	canonical	3	948	junction_1	166	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCCTGTGTCTGTGTG	NA	False	NA	12	True	ATTAAA	-12	NA	69286594	69287501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69286799_69287002_69287187_69287345
Isoform_21492_89	chr11	+	388	2	FSM	ENSMUSG00000059278.10	ENSMUST00000124932.2	404	2	11	5	11	-5	multi-exon	FALSE	canonical	3	1280	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCCTGTGTCTGTGTG	NA	False	NA	12	True	ATTAAA	-12	NA	69286954	69287501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69287187_69287345
Isoform_21500_533	chr11	+	1822	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_10	535.886405873484	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
Isoform_21503_2443	chr11	+	1726	11	FSM	ENSMUSG00000059552.14	ENSMUST00000005371.12	1772	11	46	0	0	0	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	2443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
Isoform_21504_492	chr11	+	1753	11	FSM	ENSMUSG00000059552.14	ENSMUST00000005371.12	1772	11	19	0	19	0	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471203	69482699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
Isoform_21508_41	chr11	+	2457	10	NIC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1895	junction_3	129.307080191513	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
Isoform_21532_4	chr11	+	946	6	FSM	ENSMUSG00000069835.11	ENSMUST00000108656.9	968	6	30	-8	2	8	multi-exon	FALSE	canonical	2	7	junction_2	1.72046505340853	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTGAAGCCCTTCTA	NA	False	NA	NA	False	AATAAA	-42	NA	69512879	69514704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69513159_69513318_69513371_69513532_69513617_69513685_69513788_69513937_69513979_69514316
Isoform_21533_3257	chr11	+	2991	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	-40	0	-40	0	multi-exon	FALSE	canonical	3	970	junction_6	95.5459436279217	3257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523775	69544123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
Isoform_21534_221	chr11	+	3022	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	-71	0	-71	0	multi-exon	FALSE	canonical	3	970	junction_6	95.5459436279217	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523744	69544123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
Isoform_21537_66	chr11	+	3141	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	-190	0	-190	0	multi-exon	FALSE	canonical	3	970	junction_6	95.5459436279217	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523625	69544123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
Isoform_21541_60	chr11	+	3140	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-23	0	intron_retention	FALSE	canonical	3	970	junction_6	97.2474506949497	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523792	69544123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
Isoform_21568_75	chr11	+	1136	2	FSM	ENSMUSG00000041287.6	ENSMUST00000047373.6	861	2	-276	1	-276	-1	multi-exon	FALSE	canonical	3	116	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTGTCCCATTTGTA	NA	False	NA	23	True	ATTAAA	-16	NA	69545863	69547552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69546726_69547278
Isoform_21569_105	chr11	+	383	4	FSM	ENSMUSG00000070394.11	ENSMUST00000133967.8	421	4	38	0	-3	0	multi-exon	FALSE	canonical	3	250	junction_1	597.808404832927	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTGGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69729377	69730439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69729400_69729745_69729778_69730013_69730095_69730191
Isoform_21570_513	chr11	+	459	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	28	5	-3	0	multi-exon	FALSE	canonical	3	1210	junction_1	145.470119115767	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTGGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69729377	69730439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
Isoform_21571_161	chr11	+	498	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	-11	5	-1	0	multi-exon	FALSE	canonical	3	1210	junction_1	145.470119115767	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTGGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69729338	69730439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
Isoform_21576_62	chr11	+	1765	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	6	1014	6	1	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCGGATGTGATGGGAG	NA	False	NA	23	True	TATAAA	-23	NA	69737448	69741870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
Isoform_21577_11	chr11	+	1875	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	7	903	7	112	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTAGTTTTCATCAC	NA	False	NA	NA	False	ATTAAA	-21	NA	69737449	69741981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
Isoform_21578_5	chr11	+	2687	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	12	86	12	-86	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACAACCTTCCTCTG	NA	False	NA	NA	False	CATAAA	-20	NA	69737454	69742798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
Isoform_21580_19	chr11	+	1962	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	-52	17	7	-10	multi-exon	FALSE	canonical	3	67	junction_4	3.33749739908346	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTTTTTAAACAGTAGA	NA	False	NA	5	True	TATAAA	-5	NA	69737449	69741852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
Isoform_21582_3	chr11	+	5356	29	FSM	ENSMUSG00000047284.15	ENSMUST00000177476.8	4952	29	-95	-309	-95	4	multi-exon	TRUE	canonical	3	25	junction_15	17.9310968625424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCGCCTCTGTCTCCC	NA	False	NA	19	True	AATAAA	-19	NA	69792546	69804650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
Isoform_21583_11	chr11	+	5197	29	FSM	ENSMUSG00000047284.15	ENSMUST00000177476.8	4952	29	57	-302	-18	-3	multi-exon	FALSE	canonical	3	25	junction_15	17.9310968625424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATCTGCCTCCGCCTCT	NA	False	NA	12	True	AATAAA	-12	NA	69792698	69804643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
Isoform_21584_10	chr11	+	5263	29	FSM	ENSMUSG00000047284.15	ENSMUST00000061837.11	5188	29	-74	-1	1	1	multi-exon	FALSE	canonical	3	43	junction_8	16.6703864896494	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTCCGCCTCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	69792642	69804647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
Isoform_21586_15	chr11	+	5206	29	FSM	ENSMUSG00000047284.15	ENSMUST00000061837.11	5188	29	-18	0	-18	0	multi-exon	FALSE	canonical	3	43	junction_8	16.6703864896494	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	69792698	69804646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
Isoform_21595_130	chr11	+	1162	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	-2	-1	-2	0	multi-exon	FALSE	canonical	3	122	junction_1	67.5763272159711	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4089	False	NA	12	True	AATAAA	-22	NA	69804873	69807417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
Isoform_21597_87	chr11	+	1356	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	-138	2	4	-1	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGCCTGAGTGCTGTT	4095	False	NA	10	True	AATAAA	-20	NA	69804879	69807415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
Isoform_21602_3	chr11	+	2307	8	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	30	junction_2	25.2384546245751	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTTCTTGTTGTCCT	NA	False	NA	5	True	AGTAAA	-8	NA	69826619	69832415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
Isoform_21603_3	chr11	+	4530	6	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	31	-3	intron_retention	FALSE	canonical	3	43	junction_1	17.8840711248865	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTGGTCTCTGGCTCT	NA	False	NA	18	True	AGTAAA	-21	NA	69826652	69832428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
Isoform_21604_4	chr11	+	2676	5	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-1614	3	intron_retention	FALSE	canonical	3	80	junction_3	5.06828373317832	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTCTGGCTCTTCTGTT	NA	False	NA	24	True	AGTAAA	-27	NA	69829058	69832434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
Isoform_21605_4	chr11	+	5271	5	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-158	3	intron_retention	FALSE	canonical	3	80	junction_3	5.06828373317832	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTCTGGCTCTTCTGTT	NA	False	NA	24	True	AGTAAA	-27	NA	69826463	69832434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
Isoform_21609_4	chr11	+	889	5	NIC	ENSMUSG00000018569.13	novel	1335	4	NA	NA	-77	-2	combination_of_known_junctions	TRUE	canonical	1	6	junction_1	48.7493589701444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTCTTTCCAGGCCG	8666	False	NA	4	True	AATAAA	-14	NA	69856144	69858706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69856193_69856710_69856976_69857768_69857934_69858045_69858131_69858380
Isoform_21610_69	chr11	+	1331	4	FSM	ENSMUSG00000018569.13	ENSMUST00000018713.13	1335	4	-1	5	-1	-2	multi-exon	FALSE	canonical	3	113	junction_1	5.71547606649408	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTCTTTCCAGGCCG	8742	False	NA	4	True	AATAAA	-14	NA	69856220	69858706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69856976_69857768_69857934_69858045_69858131_69858380
Isoform_21613_9	chr11	+	1365	4	FSM	ENSMUSG00000018569.13	ENSMUST00000018713.13	1335	4	-35	5	-35	-2	multi-exon	FALSE	canonical	3	113	junction_1	5.71547606649408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTCTTTCCAGGCCG	8708	False	NA	4	True	AATAAA	-14	NA	69856186	69858706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69856976_69857768_69857934_69858045_69858131_69858380
Isoform_21616_49	chr11	+	1971	8	FSM	ENSMUSG00000018559.17_ENSMUSG00002075075.1	ENSMUST00000108593.8	1627	8	-347	3	117	-3	multi-exon	FALSE	canonical	3	123	junction_4	14.8020958251299	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCCCTAGACCCTTC	NA	False	NA	NA	False	TTTAAA	-24	NA	69871634	69881424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
Isoform_21624_653	chr11	+	895	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	450	6	-46	5	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	653	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATTTGCCCTGTGTCA	5178	False	NA	10	True	AATAAA	-20	NA	69882418	69885771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
Isoform_21627_439	chr11	+	1945	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	61	0	-38	0	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2378	False	NA	16	True	AATAAA	-26	NA	69886663	69890835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
Isoform_21628_132	chr11	+	2012	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2311	False	NA	16	True	AATAAA	-26	NA	69886596	69890835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
Isoform_21635_49	chr11	+	1762	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-56	0	43	0	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2360	False	NA	16	True	AATAAA	-26	NA	69886645	69890835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
Isoform_21636_16	chr11	+	1794	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-88	0	11	0	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2328	False	NA	16	True	AATAAA	-26	NA	69886613	69890835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
Isoform_21642_1812	chr11	+	2970	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	1	-3	1	3	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	1812	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7136	False	NA	15	True	AATAAA	-19	NA	69891421	69900940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
Isoform_2165_418	chr10	-	4066	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	34	2	-6	1	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983389	60934422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
Isoform_2166_60	chr10	-	4122	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	-21	1	9	-1	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGGATGGTTGATTTT	NA	False	NA	-3	True	AATAAA	-15	NA	60983444	60934421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
Isoform_21663_4	chr11	+	1013	5	FSM	ENSMUSG00000040963.16	ENSMUST00000179757.2	672	5	-12	-329	-12	-2	multi-exon	FALSE	canonical	3	41	junction_2	4.49305018890286	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGTGTAGCCTGGTTGT	6978	False	NA	NA	False	AAAAAG	-13	NA	69988505	69997011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69988718_69988878_69988966_69989053_69989200_69996201_69996309_69996550
Isoform_21664_3	chr11	+	978	3	ISM	ENSMUSG00000040950.14	ENSMUST00000108584.2	1307	8	1967	-2	1967	2	3prime_fragment	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAGAAATATAGG	131	False	NA	NA	False	NA	NA	NA	70026965	70028123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_70027164_70027266_70027419_70027495
Isoform_21666_7	chr11	+	1790	15	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	84.118842073799	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323471	70331496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70323580_70326341_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
Isoform_21667_9	chr11	+	1764	15	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	65.7627538650745	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323464	70331496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70323580_70326341_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_21669_7	chr11	+	2105	13	ISM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	2	4	2	-4	intron_retention	FALSE	canonical	3	232	junction_1	16.6506172725084	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323464	70331496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487
Isoform_21670_47	chr11	+	1776	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	2	-1	2	1	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	70323464	70331501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
Isoform_21672_6	chr11	+	1891	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	-118	4	-116	-4	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323344	70331496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
Isoform_21673_8	chr11	+	1927	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	-4	-146	-2	-3	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGAAACTTGGCTTG	NA	False	NA	34	True	AATAAA	-40	NA	70323458	70331646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
Isoform_21674_7	chr11	+	1999	14	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_13	71.862459029395	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323460	70331496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330677
Isoform_21675_22	chr11	+	1890	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-15	-27	1	-2	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAAACTTGGCTTGG	NA	False	NA	35	True	AATAAA	-41	NA	70323463	70331647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_21676_235	chr11	+	1737	15	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	69.2497697631183	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323464	70331496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330677_70330732_70330989
Isoform_21678_31	chr11	+	1855	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-127	120	-109	0	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323351	70331500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_21682_6	chr11	+	2026	14	NNC	ENSMUSG00000060216.16	novel	1443	16	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_12	70.5554463235629	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	70323470	70331501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330677_70330732_70330989
Isoform_21687_11	chr11	+	1708	14	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	69.6723523816336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGTGTTCTGTCAG	NA	False	NA	18	True	AATAAA	-18	NA	70323471	70331504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70323580_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_21691_150	chr11	+	901	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	-1	2	-1	-2	multi-exon	FALSE	canonical	3	117	junction_2	11	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTAAGAGTCTCTCTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	70342743	70344551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70342890_70343033_70343165_70343927
Isoform_21692_14	chr11	+	1004	2	FSM	ENSMUSG00000018923.14	ENSMUST00000152348.2	870	2	31	-165	31	2	multi-exon	FALSE	canonical	3	117	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTCTCTCTCTCGCTC	NA	False	NA	NA	False	AATAAA	-22	NA	70342788	70344555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70343165_70343927
Isoform_21693_5	chr11	+	928	5	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-14	-3	5	3	intron_retention	FALSE	canonical	3	5766	junction_2	311.248594374336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCTGTGTGAAGGTTC	NA	False	NA	26	True	AATAAA	-16	NA	70416197	70418478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004
Isoform_21695_174	chr11	+	1024	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-15	-211	4	2	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTCTGCCTGCATGT	NA	False	NA	19	True	AATAAA	-20	NA	70416196	70418686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
Isoform_21696_22	chr11	+	855	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-59	2	-40	-2	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACGTTTCTGTGTGAA	NA	False	NA	21	True	AATAAA	-11	NA	70416152	70418473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
Isoform_21698_13	chr11	+	1310	5	NIC	ENSMUSG00000018286.7	novel	798	6	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	5742	junction_4	109.33206300075	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACGTTTCTGTGTGAA	NA	False	NA	21	True	AATAAA	-11	NA	70416202	70418473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70418150_70418262
Isoform_217_270	SIRV10001	+	9941	1	FSM	SIRV10001A	SIRV10001	9941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV10001_+_0_9900
Isoform_2170_369	chr10	-	4066	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	2	2	2	1	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983451	60934422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
Isoform_21702_4	chr11	+	2031	3	NIC	ENSMUSG00000018286.7	novel	798	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	5742	junction_2	139.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACGTTTCTGTGTGAA	NA	False	NA	21	True	AATAAA	-11	NA	70416211	70418473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70417252_70417369_70418150_70418262
Isoform_21705_6	chr11	+	3470	25	NIC	ENSMUSG00000020828.14	novel	875	7	NA	NA	20	-5	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	6.19755776271768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGCCCATGCCTCTTCTT	NA	False	NA	-3	True	AATAAA	-9	NA	70430909	70448931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
Isoform_21706_8	chr11	+	3379	25	NIC	ENSMUSG00000020828.14	novel	875	7	NA	NA	116	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	6.19755776271768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70431005	70448936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
Isoform_21707_32	chr11	+	3706	25	FSM	ENSMUSG00000020828.14	ENSMUST00000018429.12	3659	25	-47	0	-47	0	multi-exon	FALSE	canonical	2	3	junction_10	5.6248456768954	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70431084	70448936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
Isoform_21708_4	chr11	+	3793	25	FSM	ENSMUSG00000020828.14	ENSMUST00000018429.12	3659	25	-134	0	108	0	multi-exon	FALSE	canonical	2	3	junction_10	5.6248456768954	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70430997	70448936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
Isoform_21709_4	chr11	+	3571	24	NIC	ENSMUSG00000020828.14	novel	3659	25	NA	NA	-63	-1	intron_retention	TRUE	canonical	2	6	junction_9	5.25817394108515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGCCTCTTCTTGGAG	NA	False	NA	1	True	AATAAA	-13	NA	70431068	70448935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
Isoform_21710_40	chr11	+	4995	33	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	22.8920701335637	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTGAGATCCTACTAT	1466	False	NA	NA	False	AATAAA	-21	NA	70453706	70505306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_21713_48	chr11	+	4969	32	FSM	ENSMUSG00000020827.19	ENSMUST00000072873.14	4610	32	-9	-350	0	0	multi-exon	FALSE	canonical	3	41	junction_20	18.9436427990342	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1466	False	NA	NA	False	AATAAA	-19	NA	70453706	70505304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_21715_11	chr11	+	4889	32	FSM	ENSMUSG00000020827.19	ENSMUST00000102559.11	4865	32	-26	2	-9	-2	multi-exon	FALSE	canonical	3	21	junction_17	25.4119032798382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCATTTTGAGATCCTA	1457	False	NA	NA	False	AATAAA	-17	NA	70453697	70505302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_21717_3	chr11	+	4894	32	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-13	2	combination_of_known_junctions	TRUE	canonical	2	4	junction_21	29.1541170166728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTGAGATCCTACTAT	1453	False	NA	NA	False	AATAAA	-21	NA	70453693	70505306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_21718_17	chr11	+	4858	31	FSM	ENSMUSG00000020827.19	ENSMUST00000102558.11	3903	31	-189	-766	0	0	multi-exon	FALSE	canonical	3	21	junction_17	21.9476397111145	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1466	False	NA	NA	False	AATAAA	-19	NA	70453706	70505304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_21720_6	chr11	+	4855	31	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	26.5057645721748	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1466	False	NA	NA	False	AATAAA	-19	NA	70453706	70505304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_21726_12	chr11	+	1770	9	NIC	ENSMUSG00000040746.16	novel	1957	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_3	157.209205757805	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGGTTAAGAT	9190	False	NA	19	True	AATAAA	-20	NA	70538112	70542236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70538779_70538854_70538936_70540046_70540121_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
Isoform_21729_43	chr11	+	1901	8	ISM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	1	8	1	1	intron_retention	FALSE	canonical	3	485	junction_5	20.0173394223863	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTAAGATCAT	9191	False	NA	22	True	AATAAA	-23	NA	70538113	70542239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589
Isoform_2173_13	chr10	-	4141	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	-72	1	-43	-1	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGGATGGTTGATTTT	NA	False	NA	-3	True	AATAAA	-15	NA	60983525	60934421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
Isoform_21732_605	chr11	+	1825	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	0	8	0	1	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTAAGATCAT	9190	False	NA	22	True	AATAAA	-23	NA	70538112	70542239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
Isoform_21733_23	chr11	+	1887	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	-62	8	-10	1	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTAAGATCAT	9128	False	NA	22	True	AATAAA	-23	NA	70538050	70542239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
Isoform_2174_33	chr10	-	4036	15	NIC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	117.157773440566	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGGATGGTTGATTTT	NA	False	NA	-3	True	AATAAA	-15	NA	60983451	60934421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983394
Isoform_21742_14	chr11	+	1970	8	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	1	1	intron_retention	FALSE	canonical	3	525	junction_7	8.51649060616507	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTAAGATCAT	9191	False	NA	22	True	AATAAA	-23	NA	70538113	70542239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540844_70540951_70541046_70541589_70541671_70541747
Isoform_21744_11	chr11	+	1564	12	FSM	ENSMUSG00000060600.16	ENSMUST00000108548.8	1564	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.1466718079752	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	7115	False	NA	13	True	AATAAA	-16	NA	70548029	70553339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70548094_70548585_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_21745_39	chr11	+	1451	12	FSM	ENSMUSG00000060600.16	ENSMUST00000072841.12	1454	12	3	0	1	0	multi-exon	FALSE	canonical	2	23	junction_1	14.3486688414174	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	7116	False	NA	13	True	AATAAA	-16	NA	70548030	70553339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_21746_5	chr11	+	1461	12	NIC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	18.9020966085339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCATGCTGTGTTCCTTA	7115	False	NA	10	True	AATAAA	-13	NA	70548029	70553336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70548106_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_21749_3	chr11	+	4263	23	FSM	ENSMUSG00000020821.18	ENSMUST00000094499.11	5168	23	-52	957	-39	-957	multi-exon	FALSE	canonical	0	0	junction_1	1.80220250923627	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGTGGTTGGTGG	NA	False	NA	8	True	AATAAA	-8	NA	70591334	70620256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70591536_70593197_70593378_70593597_70593732_70594093_70594171_70594524_70594705_70595283_70595350_70595724_70595904_70595995_70596108_70596506_70596585_70596725_70596792_70596878_70596955_70597506_70597586_70597766_70597913_70599267_70599438_70599604_70599685_70599776_70599853_70608244_70608325_70609824_70609920_70614873_70614958_70615647_70615835_70615929_70616003_70616713_70617329_70619027
Isoform_21750_16	chr11	+	2027	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	32	2	32	-2	multi-exon	FALSE	canonical	3	29	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTCCTCTGGCCTTTCC	954	False	NA	16	True	ATTAAA	-24	NA	70655066	70663752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70655376_70662034
Isoform_21751_33	chr11	+	1798	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	262	1	262	-1	multi-exon	FALSE	canonical	3	29	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCTGGCCTTTCCT	132	False	NA	17	True	ATTAAA	-25	NA	70655296	70663753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70655376_70662034
Isoform_21753_18	chr11	+	1289	5	FSM	ENSMUSG00000020817.17	ENSMUST00000179114.8	1264	5	-25	0	-11	0	multi-exon	FALSE	canonical	3	143	junction_4	19.8179211826064	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCCCTCCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	70735592	70784947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394
Isoform_21757_44	chr11	+	5418	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-11	1	-11	-1	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGAATAAATAAATTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	70735592	70833930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
Isoform_21759_96	chr11	+	5217	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-11	202	-11	-202	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTGTGTGGCCTTTTCC	NA	False	NA	15	True	ATTAAA	-16	NA	70735592	70833729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
Isoform_21767_13	chr11	+	5118	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-18	-203	combination_of_known_junctions	TRUE	canonical	3	17	junction_9	40.6215383140521	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGAGTGTGTGGCCTTTTC	NA	False	NA	14	True	ATTAAA	-15	NA	70735585	70833728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
Isoform_2177_7	chr10	-	4279	19	ISM	ENSMUSG00000059901.13	ENSMUST00000092486.11	5188	22	27388	2	27192	-2	3prime_fragment	FALSE	canonical	2	12	junction_8	3.8873012632302	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTGCCCTTGGTGTTTT	NA	False	NA	-6	True	TTTAAA	-17	NA	61081829	61032892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047448_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081704
Isoform_21772_208	chr11	+	788	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	281	31	3	1	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861319	70868628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
Isoform_21773_12	chr11	+	922	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	268	-90	1	90	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCCCAAAGGAATAG	NA	False	NA	135	True	AATAAA	-13	NA	70861306	70868749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
Isoform_21774_13	chr11	+	1093	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	-24	31	-24	1	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861014	70868628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
Isoform_21776_8	chr11	+	712	7	FSM	ENSMUSG00000018449.13	ENSMUST00000178822.8	566	7	-31	-115	-4	1	multi-exon	FALSE	canonical	3	5	junction_5	117.134419459962	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861301	70868628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865819_70865867_70868483
Isoform_21777_5	chr11	+	661	6	FSM	ENSMUSG00000018449.13	ENSMUST00000167509.2	519	6	-26	-116	1	2	multi-exon	FALSE	canonical	3	23	junction_5	118.829962551538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTGTTCTGATGTG	NA	False	NA	15	True	ATTAAA	-16	NA	70861306	70868629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70868483
Isoform_21778_6	chr11	+	1883	6	NIC	ENSMUSG00000018449.13	novel	1100	7	NA	NA	-23	-7	intron_retention	FALSE	canonical	3	224	junction_4	52.6748516846512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAACCTCAACTTTCCT	NA	False	NA	38	True	ATTAAA	-39	NA	70861015	70868652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70865867_70868483
Isoform_21779_54	chr11	+	1555	6	NIC	ENSMUSG00000018449.13	novel	1100	7	NA	NA	3	1	intron_retention	FALSE	canonical	3	224	junction_4	52.6748516846512	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861319	70868628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70865867_70868483
Isoform_21780_15	chr11	+	715	6	FSM	ENSMUSG00000018449.13	ENSMUST00000171254.8	548	6	-26	-141	1	-5	multi-exon	FALSE	canonical	3	39	junction_3	115.373480488369	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACCTCAACTTTCCTGG	NA	False	NA	40	True	ATTAAA	-41	NA	70861306	70868654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70864959_70865725_70865867_70868483
Isoform_21781_4	chr11	+	802	6	FSM	ENSMUSG00000018449.13	ENSMUST00000171254.8	548	6	-12	-242	4	96	multi-exon	FALSE	canonical	3	39	junction_3	115.373480488369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAAAGGAATAGCGAATG	NA	False	NA	141	True	AATAAA	-19	NA	70861320	70868755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70864959_70865725_70865867_70868483
Isoform_21782_25	chr11	+	1442	5	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	6	-1	intron_retention	FALSE	canonical	3	39	junction_3	128.657248144051	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTTCTGATGTGG	NA	False	NA	16	True	ATTAAA	-17	NA	70861322	70868630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70865867_70868483
Isoform_21783_9	chr11	+	490	4	FSM	ENSMUSG00000018449.13	ENSMUST00000169965.8	343	4	-32	-115	-5	1	multi-exon	FALSE	canonical	3	26	junction_3	151.702193641211	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861300	70868628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70868483
Isoform_21784_22	chr11	+	2428	4	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	300	junction_3	33.0689515339624	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTTCTGATGTGG	NA	False	NA	16	True	ATTAAA	-17	NA	70861329	70868630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70861414_70862589_70862761_70863840_70865867_70868483
Isoform_21785_18	chr11	+	2703	4	FSM	ENSMUSG00000040599.14	ENSMUST00000164220.8	1416	4	2	-1289	2	-16	multi-exon	FALSE	canonical	3	11	junction_1	46.3057471835	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATACTTCAGTATTTA	NA	False	NA	0	True	AATAAA	-21	NA	70910438	70918181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70910550_70910831_70911016_70915375_70915538_70915935
Isoform_21786_67	chr11	+	2527	3	FSM	ENSMUSG00000040599.14	ENSMUST00000133413.8	344	3	2	-2185	2	-8	multi-exon	FALSE	canonical	3	36	junction_1	44	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTATTTATGTATTAT	NA	False	NA	8	True	AATAAA	-29	NA	70910438	70918189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70910550_70915375_70915538_70915935
Isoform_21788_102	chr11	+	3001	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	2	0	2	0	multi-exon	FALSE	canonical	3	76	junction_1	24	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	16	True	AATAAA	-37	NA	70910438	70918197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_70911016_70915375_70915538_70915935
Isoform_21792_55	chr11	+	2832	9	FSM	ENSMUSG00000020811.17	ENSMUST00000108511.8	2866	9	32	2	32	-2	multi-exon	FALSE	canonical	3	7	junction_4	2.29128784747792	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTGTCTCTGCCTCT	NA	False	NA	17	True	CATAAA	-30	NA	71641837	71680471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_71642056_71650403_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494
Isoform_21795_297	chr11	+	1488	6	FSM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	24	1	-23	-1	multi-exon	FALSE	canonical	0	0	junction_3	92.1316449435263	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATGTTTTTAGATATC	NA	False	NA	13	True	AATAAA	-17	NA	71933304	71938195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937512
Isoform_21796_16	chr11	+	1921	5	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	11	-1	intron_retention	FALSE	canonical	3	210	junction_4	14.6116391962025	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATGTTTTTAGATATC	NA	False	NA	13	True	AATAAA	-17	NA	71933291	71938195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_71933361_71933842_71934164_71935806_71936601_71937165_71937220_71937512
Isoform_21797_8	chr11	+	1236	5	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-5	-4	combination_of_known_junctions	TRUE	canonical	3	37	junction_2	82.8930033235616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCATGTTTTTAGAT	NA	False	NA	10	True	AATAAA	-14	NA	71933275	71938192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_71933361_71933842_71934164_71936504_71936601_71937165_71937220_71937512
Isoform_21798_6	chr11	+	3152	5	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_2	98.720248682831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCATGTTTTTAGAT	NA	False	NA	10	True	AATAAA	-14	NA	71933280	71938192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_71933361_71933842_71936085_71936504_71936601_71937165_71937220_71937512
Isoform_21799_10	chr11	+	3561	4	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	11	-4	intron_retention	FALSE	canonical	3	210	junction_3	16.2138486760204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCATGTTTTTAGAT	NA	False	NA	10	True	AATAAA	-14	NA	71933291	71938192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_71933361_71933842_71936601_71937165_71937220_71937512
Isoform_21803_6	chr11	+	4055	3	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	210	junction_2	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCATGTTTTTAGAT	NA	False	NA	10	True	AATAAA	-14	NA	71933279	71938192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_71936601_71937165_71937220_71937512
Isoform_21804_1215	chr11	+	732	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	13	236	13	-236	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAACCATTAAGTTTT	NA	False	NA	8	True	AATAAA	-8	NA	72098385	72100605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
Isoform_21812_24	chr11	+	672	3	NIC	ENSMUSG00000020803.4	novel	981	4	NA	NA	2	-231	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	739	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATTAAGTTTTTTAAC	NA	False	NA	13	True	AATAAA	-13	NA	72098374	72100610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_72098595_72099078_72099161_72100240
Isoform_21814_3	chr11	+	669	5	NNC	ENSMUSG00000040483.16	novel	2597	6	NA	NA	-42	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.03108891324554	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGACAAAAAATAGAAACAG	NA	False	NA	NA	False	AGTAAA	-13	NA	72192412	72199558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_72192536_72194152_72194289_72195491_72195687_72197389_72197479_72199432
Isoform_21815_9	chr11	+	2104	4	FSM	ENSMUSG00000040471.18	ENSMUST00000076443.10	1818	4	-286	0	-286	0	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGAGTCTGAGTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	72326065	72329226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72326591_72327264_72327468_72327544_72327659_72327964
Isoform_21823_5855	chr11	+	4124	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	16	218	-6	-218	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	5855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332196	72342376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
Isoform_21826_83	chr11	+	4344	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	16	-2	-6	2	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGACCTGGTTCTT	NA	False	NA	21	True	AATAAA	-34	NA	72332196	72342596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
Isoform_21907_258	chr11	+	3829	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTATTTTGGTTTT	NA	False	NA	11	True	AATAAA	-20	NA	72498094	72577307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
Isoform_21908_644	chr11	+	1959	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-14	1870	-14	-1870	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCAAGTTGTTGGCTTT	NA	False	NA	NA	False	AATATA	-15	NA	72498094	72575437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
Isoform_21910_20	chr11	+	3892	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-79	2	-79	-2	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGAGCTATTTTGGTT	NA	False	NA	9	True	AATAAA	-18	NA	72498029	72577305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
Isoform_21912_37	chr11	+	2019	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-78	1874	-78	-1874	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTCAAGTTGTTGG	NA	False	NA	NA	False	AATATA	-11	NA	72498030	72575433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
Isoform_21919_15	chr11	+	2078	7	NNC	ENSMUSG00000020794.14	novel	3931	7	NA	NA	-27	-1870	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	361.934347944793	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCAAGTTGTTGGCTTT	NA	False	NA	NA	False	AATATA	-15	NA	72498081	72575437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_72498462_72553896_72554000_72560859_72560966_72563785_72563884_72568530_72568710_72570194_72570319_72574349
Isoform_21923_173	chr11	+	7104	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	2	924	2	1	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAAAGTGTAAACTTTA	NA	False	NA	17	True	AATAAA	-18	NA	72580833	72662048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
Isoform_21928_14	chr11	+	6968	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	29.9114003593208	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAAAGTGTAAACTTTA	NA	False	NA	17	True	AATAAA	-18	NA	72580833	72662048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
Isoform_21936_117	chr11	+	4570	22	FSM	ENSMUSG00000020788.16	ENSMUST00000021142.8	4593	22	19	4	19	-4	multi-exon	FALSE	canonical	3	72	junction_1	15.8513502933488	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	18	True	AATAAA	-18	NA	72852013	72883865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72852298_72861421_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
Isoform_21938_18	chr11	+	4583	22	FSM	ENSMUSG00000020788.16	ENSMUST00000163326.8	4606	22	19	4	19	-4	multi-exon	FALSE	canonical	3	16	junction_21	23.72461048905	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	18	True	AATAAA	-18	NA	72852013	72883865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72852298_72861421_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880387_72882514
Isoform_21939_32	chr11	+	4496	21	FSM	ENSMUSG00000020788.16	ENSMUST00000108485.9	4520	21	19	5	19	-5	multi-exon	FALSE	canonical	3	12	junction_20	24.9797918325994	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72852013	72883864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72852298_72861421_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
Isoform_21947_52	chr11	+	3426	16	FSM	ENSMUSG00000020785.18	ENSMUST00000092937.13	3424	16	-12	10	-12	1	multi-exon	FALSE	canonical	2	15	junction_1	5.11815939137846	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCTTTGTAT	NA	False	NA	NA	False	AATAAA	-19	NA	72909856	72932889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
Isoform_21949_4	chr11	+	3713	15	FSM	ENSMUSG00000020785.18	ENSMUST00000155720.2	3717	15	6	-2	6	2	multi-exon	FALSE	canonical	2	15	junction_1	4.90158241837079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTTTGTATG	NA	False	NA	NA	False	AATAAA	-20	NA	72909839	72932890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928452_72928674_72928804_72929237_72929342_72931046
Isoform_21950_14	chr11	+	3612	17	NNC	ENSMUSG00000020785.18	novel	3424	16	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	7.21543484483091	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTTTGTATG	NA	False	NA	NA	False	AATAAA	-20	NA	72909816	72932890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_72909954_72910193_72910339_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
Isoform_21954_16	chr11	+	1990	11	ISM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	95	13030	5	-13030	5prime_fragment	FALSE	canonical	3	251	junction_10	29.380946206683	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTTTTCAGTATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	72938703	72967113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440
Isoform_21956_462	chr11	+	2752	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	95	9259	5	-9259	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGGAGTGTCATTAT	NA	False	NA	19	True	AATATA	-24	NA	72938703	72970884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
Isoform_21957_86	chr11	+	2908	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	95	9103	5	-9103	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGTGTCTCTGAC	NA	False	NA	8	True	NA	NA	NA	72938703	72971040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
Isoform_21962_9	chr11	+	2978	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	94	9034	4	-9034	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTAAGTTTATGTTTA	NA	False	NA	77	True	NA	NA	NA	72938702	72971109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
Isoform_21964_10	chr11	+	808	5	ISM	ENSMUSG00000005947.12	ENSMUST00000006101.4	3845	31	47831	-11	47831	11	3prime_fragment	FALSE	canonical	3	28	junction_3	3.24037034920393	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACATAGTCCTTATT	NA	False	NA	20	True	ATTAAA	-29	NA	73029239	73038283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_73029338_73029592_73029689_73031492_73031589_73036366_73036478_73037876
Isoform_21966_8	chr11	+	2565	13	FSM	ENSMUSG00000005950.15	ENSMUST00000006104.10	2395	13	-175	5	-175	-5	multi-exon	FALSE	canonical	2	4	junction_5	3.62476052848859	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTTCTGACCTGTG	3193	False	NA	7	True	GATAAA	-17	NA	73051071	73063506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_73051560_73055681_73055833_73056365_73056438_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062590
Isoform_21968_190	chr11	+	1247	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	168	108	0	-3	multi-exon	FALSE	canonical	3	98	junction_1	3.09120616516523	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGGGGTTTCTGTTAG	4376	False	NA	NA	False	AATAAA	-13	NA	73068076	73072870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
Isoform_21969_29	chr11	+	2808	7	FSM	ENSMUSG00000005951.14	ENSMUST00000006105.7	2808	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	1.34370962471642	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTTTGATGAACACACAC	4992	False	NA	NA	False	AATAAA	-22	NA	73090285	73115337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_73090507_73094747_73094890_73104156_73104341_73104880_73105034_73105790_73105967_73108624_73108826_73113606
Isoform_21970_3	chr11	+	2692	6	ISM	ENSMUSG00000005951.14	ENSMUST00000006105.7	2808	7	4347	10	4347	-1	3prime_fragment	FALSE	canonical	0	0	junction_5	1.35646599662505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATTTTATCCCTTTGAT	4054	False	NA	NA	False	AATAAA	-12	NA	73094632	73115327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_73094890_73104156_73104341_73104880_73105034_73105790_73105967_73108624_73108826_73113606
Isoform_21971_7	chr11	+	3999	4	FSM	ENSMUSG00000069814.7	ENSMUST00000100866.3	4002	4	-5	8	-5	-8	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCACGATGAGAGTGC	NA	False	NA	16	True	AATAAA	-22	NA	74510425	74532334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_74510673_74520784_74520938_74526066_74526115_74528783
Isoform_21974_300	chr11	+	5398	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	-19	0	1	0	multi-exon	FALSE	canonical	0	0	junction_12	69.5319897601097	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540321	74561673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
Isoform_21975_82	chr11	+	5463	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	-84	0	-64	0	multi-exon	FALSE	canonical	0	0	junction_12	69.5319897601097	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540256	74561673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
Isoform_21978_9	chr11	+	5568	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	-189	0	-169	0	multi-exon	TRUE	canonical	0	0	junction_12	69.5319897601097	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540151	74561673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
Isoform_21980_7	chr11	+	5462	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	10	-5	intron_retention	FALSE	canonical	0	0	junction_12	70.9265930185725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCCCCAGCCTTTCC	NA	False	NA	21	True	AATAAA	-15	NA	74540330	74561668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
Isoform_21982_47	chr11	+	5386	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	82.5694955779675	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540330	74561673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
Isoform_22007_13	chr11	+	2299	8	NIC	ENSMUSG00000020741.18	novel	6098	24	NA	NA	1580	1	intron_retention	FALSE	canonical	3	303	junction_6	22.9266799397825	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCCTTTCCTGTGTG	NA	False	NA	27	True	AATAAA	-21	NA	74556887	74561674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
Isoform_2201_794	chr10	-	4036	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	193	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	86.6294407231168	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGCTTTGCTGATTG	NA	False	NA	-6	True	ATTAAA	-17	NA	61219116	61155439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
Isoform_22014_44	chr11	+	2801	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	11	793	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	139.204202522769	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATCCTGTTTG	8505	False	NA	97	True	AATATA	-15	NA	74661666	74709513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
Isoform_2202_91	chr10	-	4194	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	34	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.6294407231168	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219275	61155440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
Isoform_22022_283	chr11	+	2721	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	26	9837	26	794	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTGATCCTGTTTGA	8520	False	NA	98	True	AATATA	-16	NA	74661681	74709514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
Isoform_2203_41	chr10	-	4256	20	FSM	ENSMUSG00000020092.10	ENSMUST00000020289.10	4282	20	21	5	21	-5	multi-exon	FALSE	canonical	3	320	junction_14	26.6759563689748	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGCTTTGCTGATTG	NA	False	NA	-6	True	ATTAAA	-17	NA	61219288	61155439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
Isoform_22031_113	chr11	+	4579	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	-3	14	-3	-14	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGAGCTCCCAAGCCTGC	NA	False	NA	27	True	AATAAA	-36	NA	74721742	74736537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
Isoform_22035_33	chr11	+	4642	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	-64	12	-64	-12	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGCTCCCAAGCCTGCAG	NA	False	NA	29	True	AATAAA	-38	NA	74721681	74736539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
Isoform_22040_3	chr11	+	4597	5	NIC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	-64	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	37.5923861972075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGGAGCTCCCAAGCCTG	NA	False	NA	26	True	AATAAA	-35	NA	74721681	74736536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_74722228_74727188_74727775_74728437_74728550_74732986_74733180_74733376
Isoform_22050_1772	chr11	+	3375	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	11	3	-9	-3	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	1772	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTGTCTGGATTCTA	NA	False	NA	23	True	AATAAA	-15	NA	74788914	74800165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
Isoform_2207_88	chr10	-	4138	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	143	-4	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_14	71.6844810258441	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219166	61155438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
Isoform_22088_228	chr11	+	5841	19	FSM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	0	7	0	-7	multi-exon	FALSE	canonical	3	122	junction_1	11.7104996677826	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAATTGACCTCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	74816648	75055267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
Isoform_2209_18	chr10	-	4258	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_14	71.6844810258441	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219288	61155440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
Isoform_22092_17	chr11	+	3270	12	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	41.9042592363683	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAATTGACCTCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	74816649	75055267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_74816830_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
Isoform_22093_6	chr11	+	3091	10	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-28	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	47.1333804808816	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAATTGACCTCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	74816620	75055267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_74816830_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
Isoform_22105_14	chr11	+	3533	2	FSM	ENSMUSG00000045287.7	ENSMUST00000102514.4	3525	2	-10	2	-10	-2	multi-exon	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTTTTTTATTTCCT	NA	False	NA	6	True	AATAAA	-17	NA	75084598	75158593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75085121_75155582
Isoform_22107_32	chr11	+	3484	2	FSM	ENSMUSG00000045287.7	ENSMUST00000102514.4	3525	2	40	1	40	-1	multi-exon	FALSE	canonical	3	24	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTTTTTTATTTCCTA	NA	False	NA	7	True	AATAAA	-18	NA	75084648	75158594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75085121_75155582
Isoform_22111_7	chr11	+	3361	12	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-28	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	20.2051462227893	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAACTCTGTATTGGTT	NA	False	NA	30	True	AATAAA	-32	NA	75239292	75296526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75280967_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
Isoform_22113_91	chr11	+	3456	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	48	13	-14	-13	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGATGGCAACTCTG	NA	False	NA	22	True	AATAAA	-24	NA	75239306	75296518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
Isoform_22115_3	chr11	+	3297	10	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	20	-21	intron_retention	FALSE	canonical	2	2	junction_8	24.8481809951037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTCTTCCTGGGATGG	NA	False	NA	14	True	AATAAA	-16	NA	75239340	75296510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75294242_75294367_75295591
Isoform_22117_3	chr11	+	3199	11	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	64	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	24.4040980165217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCAACTCTGTATTGGT	NA	False	NA	29	True	AATAAA	-31	NA	75239384	75296525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
Isoform_22123_25	chr11	+	1628	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	138	-14	33	14	multi-exon	FALSE	canonical	3	9	junction_2	6.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTTTATGAGTGTTTT	3976	False	NA	22	True	AATAAA	-33	NA	75352502	75357516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75352582_75354518_75354684_75356132
Isoform_22124_12	chr11	+	1839	4	ISM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	54	0	54	0	intron_retention	FALSE	canonical	3	27	junction_1	3.09120616516523	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGTGAATGTGATTG	NA	False	NA	32	True	AATAAA	-24	NA	75358958	75361725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297
Isoform_22125_10	chr11	+	1887	4	ISM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	1	5	1	-5	intron_retention	FALSE	canonical	3	27	junction_1	3.09120616516523	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTCTCTTGTGAATGT	NA	False	NA	27	True	AATAAA	-19	NA	75358905	75361720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297
Isoform_22126_17	chr11	+	7247	43	FSM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	0	2	0	0	multi-exon	FALSE	canonical	2	7	junction_1	167.072261580339	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75377645	75400273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75377716_75377906_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
Isoform_22127_268	chr11	+	7423	42	FSM	ENSMUSG00000020850.15	ENSMUST00000018449.11	7442	42	18	1	14	-1	multi-exon	FALSE	canonical	3	217	junction_5	157.019499238112	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTTTTCTTGCTGTT	NA	False	NA	17	True	AATAAA	-14	NA	75377659	75400272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
Isoform_2218_65	chr10	-	5905	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-122	1	-122	-1	multi-exon	FALSE	canonical	3	200	junction_2	2.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTGGTGGTTTGTGGT	NA	False	NA	-2	True	AATAAA	-15	NA	61288562	61264270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_61269608_61270696_61270883_61288180
Isoform_2219_199	chr10	-	2621	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-132	3295	-132	1034	multi-exon	FALSE	canonical	3	200	junction_2	2.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTGGGAAAACGTAAGCT	NA	False	NA	-15	True	ATTAAA	-24	NA	61288572	61267564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_61269608_61270696_61270883_61288180
Isoform_22216_32	chr11	+	2865	11	FSM	ENSMUSG00000038188.18	ENSMUST00000042808.13	2887	11	15	7	14	-3	multi-exon	FALSE	canonical	1	3	junction_9	2.37697286480094	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAATTAATTAATTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	75404380	75417401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75404517_75404830_75404890_75405134_75405237_75405991_75406515_75411119_75411339_75411728_75411858_75412777_75412882_75413004_75413123_75414600_75414723_75414816_75414964_75416195
Isoform_22217_7	chr11	+	3087	14	FSM	ENSMUSG00000038178.17	ENSMUST00000042561.14	6891	14	19	3785	19	-93	multi-exon	FALSE	canonical	3	5	junction_1	10.1858470089601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACGTATCAGCTAATTA	6894	False	NA	28	True	AATAAA	-31	NA	75422542	75464616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75422568_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_22218_27	chr11	+	3121	14	FSM	ENSMUSG00000038178.17	ENSMUST00000108433.8	3236	14	23	92	-22	-92	multi-exon	FALSE	canonical	2	8	junction_1	9.5805522935017	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGTATCAGCTAATTAC	6898	False	NA	29	True	AATAAA	-32	NA	75422546	75464617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75422605_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_22219_10	chr11	+	3177	14	NIC	ENSMUSG00000038178.17	novel	3236	14	NA	NA	16	-87	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	10.1858470089601	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCAGCTAATTACTGTAT	6891	False	NA	34	True	AATAAA	-37	NA	75422539	75464622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75422649_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_22220_23	chr11	+	3298	14	FSM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	60	3787	34	-100	multi-exon	FALSE	canonical	3	23	junction_1	7.15095061334898	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCTCCTCACGTATCAG	7349	False	NA	21	True	AATAAA	-24	NA	75422997	75464609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_22221_9	chr11	+	3372	14	FSM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	-8	3781	-8	-94	multi-exon	FALSE	canonical	3	23	junction_1	7.15095061334898	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGTATCAGCTAATT	7281	False	NA	27	True	AATAAA	-30	NA	75422929	75464615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_22222_80	chr11	+	3582	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	1	-144	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGAGTCTAGCTTATTG	NA	False	NA	7	True	AATAAA	-16	NA	75478923	75519460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
Isoform_22223_547	chr11	+	1666	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGCATCTCTGGTTAA	NA	False	NA	8	True	AATAAA	-15	NA	75478932	75517553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
Isoform_22226_47	chr11	+	1291	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-22	14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACATGGTGTAGCTGCT	NA	False	NA	36	True	TATAAA	-30	NA	75478900	75517146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
Isoform_22227_40	chr11	+	3703	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	17	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAGTCACTTACAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	75478961	75519619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
Isoform_22235_209	chr11	+	2638	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	35	6	-6	0	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCGTGTGACTCCTTT	5474	False	NA	21	True	TATAAA	-12	NA	75521848	75539691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
Isoform_22242_13	chr11	+	2817	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	-144	6	-144	0	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCGTGTGACTCCTTT	5295	False	NA	21	True	TATAAA	-12	NA	75521669	75539691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
Isoform_22243_4	chr11	+	1712	12	NIC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-10	59	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	44.0495588668449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATTGAAACAGAGTAGT	5470	False	NA	33	True	AATACA	-18	NA	75521844	75538749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537762_75538018_75538103_75538227_75538333_75538477
Isoform_22246_41	chr11	+	4624	32	FSM	ENSMUSG00000017774.20	ENSMUST00000102505.10	4652	32	27	1	27	-1	multi-exon	FALSE	canonical	3	31	junction_1	55.4580209849872	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTCTTCCTGTGAGTG	7864	False	NA	14	True	AATAAA	-18	NA	75541356	75564735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
Isoform_22250_330	chr11	+	4530	32	FSM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	16	1	16	-1	multi-exon	FALSE	canonical	3	188	junction_1	33.5644192461903	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTCTTCCTGTGAGTG	8859	False	NA	14	True	AATAAA	-18	NA	75542351	75564735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
Isoform_22254_86	chr11	+	4576	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	141	1	-135	-1	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACAGTCTTCCTGTGAG	NA	False	NA	12	True	AATAAA	-16	NA	75546839	75564733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
Isoform_22255_109	chr11	+	4452	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	266	0	-10	0	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	False	NA	13	True	AATAAA	-17	NA	75546964	75564734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
Isoform_22258_20	chr11	+	4656	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	61	1	61	-1	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACAGTCTTCCTGTGAG	NA	False	NA	12	True	AATAAA	-16	NA	75546759	75564733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
Isoform_22277_18	chr11	+	985	3	FSM	ENSMUSG00000017776.16	ENSMUST00000093115.4	965	3	-6	-14	-6	14	multi-exon	FALSE	canonical	3	19	junction_2	223.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGGATACCGTTCT	2144	False	NA	NA	False	NA	NA	NA	75570130	75591629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75570491_75583022_75583389_75591370
Isoform_2228_634	chr10	-	1984	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	209	-18	209	18	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAGCCCTTTATTGCG	NA	False	NA	-8	True	NA	NA	NA	61619717	61574425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
Isoform_22280_146	chr11	+	3459	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	18	813	-9	30	multi-exon	FALSE	canonical	3	229	junction_2	118.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAATCTTGAAATATTTT	2141	False	NA	40	True	NA	NA	NA	75570127	75596921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75570491_75583022_75583389_75594191
Isoform_22281_389	chr11	+	3429	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	21	840	-6	3	multi-exon	FALSE	canonical	3	229	junction_2	118.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGGCTTGGTGATCT	2144	False	NA	13	True	NA	NA	NA	75570130	75596894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75570491_75583022_75583389_75594191
Isoform_22284_21	chr11	+	3527	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	-77	840	-52	3	multi-exon	FALSE	canonical	3	229	junction_2	118.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGGCTTGGTGATCT	2046	False	NA	13	True	NA	NA	NA	75570032	75596894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75570491_75583022_75583389_75594191
Isoform_22288_332	chr11	+	3627	3	FSM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	43	-28	-9	28	multi-exon	FALSE	canonical	3	225	junction_2	120.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAATCTTGAAATATT	2141	False	NA	38	True	NA	NA	NA	75570127	75596919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75570491_75583022_75583559_75594191
Isoform_2230_50	chr10	-	2108	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	85	-18	85	18	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAGCCCTTTATTGCG	NA	False	NA	-8	True	NA	NA	NA	61619841	61574425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
Isoform_22310_6966	chr11	+	1783	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	47	270	3	-270	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	6966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCATGCCTCCATC	3038	False	NA	13	True	NA	NA	NA	75623741	75656401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
Isoform_22311_3451	chr11	+	1834	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	48	218	4	-218	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	3451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATATTTGACAGTATTGT	3039	False	NA	12	True	AATAAA	-13	NA	75623742	75656453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
Isoform_22312_1659	chr11	+	2046	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	48	6	4	-6	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGGTGTAACTATGGA	3039	False	NA	20	True	ATTAAA	-16	NA	75623742	75656665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
Isoform_2232_50	chr10	-	2282	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	-89	-18	-89	18	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAGCCCTTTATTGCG	NA	False	NA	-8	True	NA	NA	NA	61620015	61574425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
Isoform_22337_5	chr11	+	2202	5	FSM	ENSMUSG00000069808.14	ENSMUST00000129853.8	962	5	0	-1240	0	-3	multi-exon	TRUE	canonical	1	2	junction_1	21.775846711437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTGTTATGTGCCCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	76070496	76100239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76070813_76093377_76093462_76096079_76096282_76097953_76098050_76098735
Isoform_22338_75	chr11	+	2128	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	1	1	1	-1	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3407	False	NA	NA	False	ATTAAA	-16	NA	76092841	76100241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
Isoform_22342_8	chr11	+	1927	4	NIC	ENSMUSG00000069808.14	novel	2130	5	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	24.0739601136904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3406	False	NA	NA	False	ATTAAA	-16	NA	76092840	76100241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_76093082_76093377_76093462_76097953_76098050_76098735
Isoform_22343_3	chr11	+	537	2	FSM	ENSMUSG00000038057.5	ENSMUST00000040806.5	581	2	46	-2	46	2	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGAGTCTGTGGCAAA	NA	False	NA	NA	False	AATAAA	-17	NA	76108479	76109494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76108575_76109052
Isoform_22344_12	chr11	+	809	3	ISM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	34	3047	13	2688	5prime_fragment	FALSE	canonical	3	128	junction_1	8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTGTACATGTGTAT	584	False	NA	NA	False	NA	NA	NA	76134574	76138398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_76134913_76135104_76135350_76138172
Isoform_22345_200	chr11	+	1461	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	49	0	28	0	multi-exon	FALSE	canonical	3	128	junction_1	6.53197264742181	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATATGAGTGTTTGCAGG	599	False	NA	23	True	ATTAAA	-31	NA	76134589	76141445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
Isoform_22346_5	chr11	+	2635	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	34	-1159	13	1159	multi-exon	FALSE	canonical	3	128	junction_1	6.53197264742181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGGAAGCATCACTGGG	584	False	NA	NA	False	NA	NA	NA	76134574	76142604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
Isoform_22348_8	chr11	+	1675	3	NIC	ENSMUSG00000038046.5	novel	1510	4	NA	NA	4	-2	intron_retention	FALSE	canonical	3	136	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCATATGAGTGTTTGCA	575	False	NA	21	True	ATTAAA	-29	NA	76134565	76141443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_76135350_76138172_76138341_76140720
Isoform_2235_16	chr10	-	2955	10	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	-3544	18	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	99.4508377833111	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAGCCCTTTATTGCG	NA	False	NA	-8	True	NA	NA	NA	61623470	61574425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561_61620556_61623337
Isoform_22350_31	chr11	+	2197	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	49	571	1	-571	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTGCTGTCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	76298017	76306547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
Isoform_22351_194	chr11	+	1055	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	47	1715	-1	248	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTATCTTTGCTGTCCT	NA	False	NA	22	True	AGTAAA	-32	NA	76298015	76305403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
Isoform_22353_9	chr11	+	2768	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	49	0	1	0	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCTGATTAAGTCCCAC	NA	False	NA	3	True	AATAAA	-15	NA	76298017	76307118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
Isoform_22357_11	chr11	+	858	3	FSM	ENSMUSG00000020843.16	ENSMUST00000152183.2	362	3	-1	-495	-1	248	multi-exon	FALSE	canonical	3	21	junction_1	125	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTATCTTTGCTGTCCT	NA	False	NA	22	True	AGTAAA	-32	NA	76298015	76305403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76298269_76301952_76302026_76304871
Isoform_2236_11	chr10	-	2038	10	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	215	18	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	124.934649583959	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAGCCCTTTATTGCG	NA	False	NA	-8	True	NA	NA	NA	61619711	61574425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_61575242_61576154_61576215_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
Isoform_22360_1404	chr11	+	2232	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	263	2	28	-2	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGCCGGCGTGTCTGG	NA	False	NA	28	True	AATAAA	-17	NA	76836592	76878203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
Isoform_22361_110	chr11	+	2330	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	165	2	-60	-2	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGCCGGCGTGTCTGG	NA	False	NA	28	True	AATAAA	-17	NA	76836494	76878203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
Isoform_22378_5	chr11	+	9246	15	FSM	ENSMUSG00000037926.16	ENSMUST00000037912.12	9178	15	-68	0	-68	0	multi-exon	TRUE	canonical	2	7	junction_1	4.23361186078213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCAAGTGTAACA	NA	False	NA	10	True	AATAAA	-20	NA	77107044	77351046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77107342_77218278_77218323_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
Isoform_22379_3	chr11	+	5774	14	NIC	ENSMUSG00000037926.16	novel	4475	14	NA	NA	-27	1267	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	3.58497852237878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTATTTGTTTTAAA	3599	False	NA	NA	False	AATAAA	-18	NA	77239078	77347614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
Isoform_22380_5	chr11	+	9173	14	NIC	ENSMUSG00000037926.16	novel	4475	14	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	3.58497852237878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTTTGTTTCAAGTGT	3628	False	NA	6	True	AATAAA	-16	NA	77239107	77351042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
Isoform_22381_3	chr11	+	2516	10	NIC	ENSMUSG00000020836.16	novel	2804	11	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.16227766016838	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTTGAAACCGCTTTT	4134	False	NA	NA	False	AATAAA	-17	NA	77353407	77361310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_77353581_77354677_77354937_77356491_77356615_77357020_77357151_77357243_77357426_77359091_77359197_77359286_77359433_77359735_77359794_77359882_77360114_77360201
Isoform_22382_8	chr11	+	2453	10	NNC	ENSMUSG00000020836.16	novel	1418	10	NA	NA	-63	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.16227766016838	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTGGTTTGAAACCGC	4134	False	NA	NA	False	AATAAA	-13	NA	77353407	77361306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_77353581_77354736_77354937_77356491_77356615_77357020_77357151_77357243_77357426_77359091_77359197_77359286_77359433_77359735_77359794_77359882_77360114_77360201
Isoform_22383_64	chr11	+	3785	20	FSM	ENSMUSG00000011877.14	ENSMUST00000037285.10	3512	20	-273	0	-273	0	multi-exon	FALSE	canonical	3	24	junction_7	121.3660245347	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAGGTGGGGCTTAGC	NA	False	NA	30	True	AATAAA	-33	NA	77384114	77398612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393654_77393682_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
Isoform_22386_760	chr11	+	3712	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-252	16	-243	-16	multi-exon	FALSE	canonical	3	379	junction_15	38.5310921429486	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGATGTCTAGAGGTT	NA	False	NA	14	True	AATAAA	-17	NA	77384144	77398596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
Isoform_22387_163	chr11	+	3738	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-282	20	-273	-20	multi-exon	TRUE	canonical	3	379	junction_15	38.5310921429486	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384114	77398592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
Isoform_2239_8	chr10	-	2740	36	NIC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-22	-250	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	5.3822080288025	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGCTCCTAATGTTGCA	NA	False	NA	NA	False	TATAAA	-29	NA	61814909	61674264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61728734_61728762_61729693_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61747485_61747513_61797067_61797138_61814127
Isoform_2240_3	chr10	-	2990	36	NIC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	5.3822080288025	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTGGTTAATCTCTAA	NA	False	NA	-3	True	AATAAA	-14	NA	61814909	61674014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61728734_61728762_61729693_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61747485_61747513_61797067_61797138_61814127
Isoform_22407_4	chr11	+	3099	2	FSM	ENSMUSG00000000686.12	ENSMUST00000094004.5	2662	2	-61	-376	-61	376	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCACTGAGCCTTCTAA	NA	False	NA	NA	False	NA	NA	NA	77405885	77411247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77406879_77409141
Isoform_2241_3	chr10	-	1823	3	FSM	ENSMUSG00000020083.14	ENSMUST00000141144.2	594	3	-520	-709	-3	-1	multi-exon	FALSE	canonical	3	121	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCGGTGAATGACTGA	NA	False	NA	-11	True	AATAAA	-20	NA	61946795	61943989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_61944903_61945662_61945792_61946014
Isoform_22415_46	chr11	+	5147	5	NNC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	84.6119820120058	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTTTCTGATTTTTTG	NA	False	NA	16	True	ATTAAA	-17	NA	77576966	77603566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508_77601907_77601930
Isoform_2242_115	chr10	-	1174	4	FSM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	39	556	2	-1	multi-exon	FALSE	canonical	3	105	junction_3	8.33999733546454	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCGGTGAATGACTGA	NA	False	NA	-11	True	AATAAA	-20	NA	61946790	61943989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_61944903_61945662_61945792_61946014_61946094_61946737
Isoform_22425_9	chr11	+	7451	42	FSM	ENSMUSG00000000631.21	ENSMUST00000108375.9	7513	42	62	0	7	0	multi-exon	FALSE	canonical	1	3	junction_10	31.5068522239413	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77654133	77756806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713488_77713501_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
Isoform_22428_101	chr11	+	7450	41	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	17.6113422259634	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77654122	77756806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
Isoform_2243_37	chr10	-	1105	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142796.8	1135	3	23	7	-14	-5	multi-exon	FALSE	canonical	3	38	junction_2	41.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAAGAAGCCGGTGAAT	NA	False	NA	-17	True	AATAAA	-14	NA	61946806	61943995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_61944903_61945662_61945792_61946737
Isoform_22446_4	chr11	+	2425	7	ISM	ENSMUSG00000037791.16	ENSMUST00000108360.8	3047	11	-24	7276	-24	-7023	5prime_fragment	FALSE	canonical	3	95	junction_1	16.3986788085707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTTGCAGCTGGGTG	NA	False	NA	NA	False	AAAAAG	-6	NA	77873555	77909764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890
Isoform_22451_66	chr11	+	3094	11	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-66	4349	-18	-2	5prime_fragment	FALSE	canonical	3	95	junction_1	13.3356664625357	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGATAAACAACTTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	77873561	77917016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710
Isoform_22452_11	chr11	+	3215	11	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-186	4348	-138	-1	5prime_fragment	FALSE	canonical	3	95	junction_1	13.3356664625357	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGATAAACAACTTTTTG	NA	False	NA	NA	False	AATAAA	-32	NA	77873441	77917017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710
Isoform_22453_10	chr11	+	4818	14	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-78	5	-30	-5	intron_retention	FALSE	canonical	3	95	junction_1	14.1258083499126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGTTTTCTGCCTGTC	NA	False	NA	13	True	TATAAA	-17	NA	77873549	77921360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668
Isoform_22454_145	chr11	+	4471	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-66	5	-18	-5	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGTTTTCTGCCTGTC	NA	False	NA	13	True	TATAAA	-17	NA	77873561	77921360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
Isoform_22456_16	chr11	+	4560	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-155	5	-107	-5	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGTTTTCTGCCTGTC	NA	False	NA	13	True	TATAAA	-17	NA	77873472	77921360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
Isoform_2246_377	chr10	-	1650	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	29	1959	29	354	multi-exon	FALSE	canonical	3	242	junction_7	11.6303613925986	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTGGAAGTCT	4905	False	NA	0	True	AATAAA	-27	NA	62067001	62023133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
Isoform_22463_129	chr11	+	1749	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	26	4	26	-2	multi-exon	FALSE	canonical	3	80	junction_1	5.93190525885234	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTCTGGCTCCCGCC	NA	False	NA	1	True	AATAAA	-13	NA	77923131	77928688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
Isoform_22464_26	chr11	+	1773	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	4	2	4	0	multi-exon	FALSE	canonical	3	80	junction_1	5.93190525885234	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTCTGGCTCCCGCCTC	NA	False	NA	3	True	AATAAA	-15	NA	77923109	77928690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
Isoform_22465_25	chr11	+	1821	4	FSM	ENSMUSG00000020834.18	ENSMUST00000122342.2	1791	4	-32	2	-29	-2	multi-exon	FALSE	canonical	3	86	junction_3	4.08248290463863	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTCTGGCTCCCGCC	NA	False	NA	1	True	AATAAA	-13	NA	77923145	77928688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77923530_77924838_77924963_77925100_77925413_77927687
Isoform_22466_42	chr11	+	2694	12	FSM	ENSMUSG00000061981.15	ENSMUST00000100784.9	2699	12	8	-3	8	0	multi-exon	FALSE	canonical	3	22	junction_2	138.547303733782	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928774	77951260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
Isoform_22469_502	chr11	+	2597	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	22	2	12	1	multi-exon	FALSE	canonical	3	351	junction_3	23.4778619128744	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTCATCGTATATTCT	NA	False	NA	19	True	AATAAA	-16	NA	77928778	77951258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
Isoform_22470_732	chr11	+	2571	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	50	0	-3	0	multi-exon	FALSE	canonical	3	351	junction_3	23.4778619128744	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928806	77951260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
Isoform_22478_90	chr11	+	2585	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	30	643	-18	-18	multi-exon	FALSE	canonical	3	80	junction_2	31	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTTTGAAAAAAAAAA	2628	False	NA	NA	False	ATTAAA	-8	NA	77985515	78046883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77985618_78033918_78034041_78044522
Isoform_22479_80	chr11	+	3217	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	32	9	-16	-9	multi-exon	FALSE	canonical	3	80	junction_2	31	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGAAAAATGCC	2630	False	NA	-7	True	TTTAAA	-39	NA	77985517	78047517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77985618_78033918_78034041_78044522
Isoform_2248_88	chr10	-	1694	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	-15	1959	-15	354	multi-exon	FALSE	canonical	3	242	junction_7	11.6303613925986	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTGGAAGTCT	4861	False	NA	0	True	AATAAA	-27	NA	62067045	62023133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
Isoform_22483_55	chr11	+	3861	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	32	-635	-16	635	multi-exon	FALSE	canonical	3	80	junction_2	31	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTCATCTTTTTTTTT	2630	False	NA	NA	False	AGTAAA	-6	NA	77985517	78048161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77985618_78033918_78034041_78044522
Isoform_22484_68	chr11	+	3105	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-16	-616	-16	-9	multi-exon	FALSE	canonical	3	49	junction_2	46.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGAAAAATGCC	2630	False	NA	-7	True	TTTAAA	-39	NA	77985517	78047517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77985618_78033918_78034041_78044634
Isoform_22485_87	chr11	+	2473	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-18	18	-18	-18	multi-exon	FALSE	canonical	3	49	junction_2	46.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTTTGAAAAAAAAAA	2628	False	NA	NA	False	ATTAAA	-8	NA	77985515	78046883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77985618_78033918_78034041_78044634
Isoform_22486_44	chr11	+	3763	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-16	-1274	-16	649	multi-exon	FALSE	canonical	3	49	junction_2	46.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTACCTTGTCCT	2630	False	NA	NA	False	AGTAAA	-20	NA	77985517	78048175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_77985618_78033918_78034041_78044634
Isoform_22490_5	chr11	+	3355	3	FSM	ENSMUSG00000037750.17	ENSMUST00000155571.2	3358	3	-16	19	-16	-19	multi-exon	FALSE	canonical	3	8	junction_1	36	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAGGAAAAAAAAAAG	NA	False	NA	-17	True	TTTAAA	-29	NA	78006415	78047507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78006664_78033918_78034041_78044522
Isoform_22492_5	chr11	+	2621	3	NIC	ENSMUSG00000037750.17	novel	3358	3	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	20.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTTTAAAAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	78006423	78046893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_78006664_78033918_78034041_78044634
Isoform_22495_15	chr11	+	1010	5	NIC	ENSMUSG00000019437.18	novel	457	4	NA	NA	-17	2	intron_retention	FALSE	canonical	3	12	junction_1	80.151419201409	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGAAGTCCTGTTCTT	NA	False	NA	NA	False	AATGAA	-3	NA	78068938	78071308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_78069063_78069863_78070048_78070195_78070279_78070365_78070449_78070772
Isoform_22497_43	chr11	+	1056	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	15	341	15	-1	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTCTGAAGTCCTGTT	NA	False	NA	NA	False	AAAACA	-8	NA	78069525	78071305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
Isoform_2250_12	chr10	-	3609	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	29	0	29	0	multi-exon	TRUE	canonical	3	242	junction_7	11.6303613925986	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTGGTGTTTTATCA	4905	False	NA	NA	False	NA	NA	NA	62067001	62021174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
Isoform_22501_17	chr11	+	1355	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	12	45	12	-45	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGGGGACTGCATCATC	NA	False	NA	7	True	AATAAA	-19	NA	78069522	78071601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
Isoform_22503_8	chr11	+	3082	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	41	-1711	-5	622	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAAGTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	78069551	78073357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
Isoform_22504_12	chr11	+	1952	3	FSM	ENSMUSG00000019437.18_ENSMUSG00000099101.3	ENSMUST00000140379.2	408	3	-1160	-384	-17	-5	multi-exon	FALSE	canonical	3	167	junction_1	12	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAGCTCTCTGAAGTCC	NA	False	NA	NA	False	AAAACA	-4	NA	78068938	78071301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78070279_78070365_78070449_78070772
Isoform_22505_118	chr11	+	1332	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	36	0	26	0	multi-exon	FALSE	canonical	3	60	junction_1	27.8790243731735	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6061	False	NA	21	True	ATTAAA	-15	NA	78079291	78083014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
Isoform_22506_14	chr11	+	1443	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	-70	-5	-70	0	multi-exon	FALSE	canonical	3	60	junction_1	27.8790243731735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTTTAAAGATTTA	5955	False	NA	26	True	ATTAAA	-20	NA	78079185	78083019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
Isoform_22507_80	chr11	+	1683	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	2	0	2	0	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6376	False	NA	21	True	ATTAAA	-15	NA	78079606	78083014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
Isoform_22511_4	chr11	+	1998	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	-313	0	26	0	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6061	False	NA	21	True	ATTAAA	-15	NA	78079291	78083014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
Isoform_22512_4	chr11	+	1793	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	-103	-5	-103	0	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTTTAAAGATTTA	6271	False	NA	26	True	ATTAAA	-20	NA	78079501	78083019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
Isoform_22514_3	chr11	+	1274	4	FSM	ENSMUSG00000044122.16	ENSMUST00000108317.3	1359	4	-176	261	-146	-2	multi-exon	FALSE	canonical	2	5	junction_2	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTACCGCTATTCTCT	NA	False	NA	5	True	AATAAA	-14	NA	78085383	78096328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78085781_78092637_78092719_78094890_78095024_78095665
Isoform_22516_27	chr11	+	1201	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	61	6	61	-6	multi-exon	FALSE	canonical	3	217	junction_1	4	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTGTGTGGTCATTT	NA	False	NA	13	True	NA	NA	NA	78136632	78146316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78136997_78141841_78142039_78145676
Isoform_22524_594	chr11	+	7375	39	FSM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	20	48	20	-48	multi-exon	FALSE	canonical	3	514	junction_1	88.3718730713483	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGGCCTTTTTTA	NA	False	NA	-27	True	AAAAAG	-26	NA	78152597	78181401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
Isoform_22527_22	chr11	+	7491	39	FSM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	3	-51	3	51	multi-exon	FALSE	canonical	3	514	junction_1	88.3718730713483	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTGGTCTTGTCTTTC	NA	False	NA	72	True	NA	NA	NA	78152580	78181500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
Isoform_22531_15	chr11	+	7630	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	132.0980497087	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78152597	78181449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78155093_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
Isoform_22584_6	chr11	+	3066	16	ISM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	95	2562	0	-3	5prime_fragment	FALSE	canonical	3	128	junction_10	12.3605105971486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAGA	2847	False	NA	NA	False	NA	NA	NA	78192449	78210721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292
Isoform_22585_385	chr11	+	3789	24	FSM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	95	3	0	-3	multi-exon	FALSE	canonical	3	128	junction_10	25.9765053072448	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2847	False	NA	5	True	AATAAA	-15	NA	78192449	78213280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
Isoform_22597_181	chr11	+	1637	9	FSM	ENSMUSG00000017390.16	ENSMUST00000017534.15	2786	9	129	1020	-71	1	multi-exon	FALSE	canonical	3	130	junction_5	18.6547581061776	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCTCTGTCTGTCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	78213922	78217587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
Isoform_22598_3	chr11	+	1443	8	NIC	ENSMUSG00000017390.16	novel	2786	9	NA	NA	-80	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	55.6079571460702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACACCGCTCTGTCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	78213913	78217584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78217087
Isoform_22601_1230	chr11	+	2452	12	FSM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	38	11	38	-11	multi-exon	FALSE	canonical	3	513	junction_10	36.2694234084327	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGATATGGATGACCATAA	NA	False	NA	17	True	NA	NA	NA	78219278	78233597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
Isoform_22604_177	chr11	+	2306	11	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	44	-11	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	151.766300607216	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGATATGGATGACCATAA	NA	False	NA	17	True	NA	NA	NA	78219284	78233597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
Isoform_22611_13	chr11	+	1357	5	FSM	ENSMUSG00000002058.14	ENSMUST00000108295.8	1371	5	6	8	6	-8	multi-exon	FALSE	canonical	3	22	junction_4	104.920207777148	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCAGCCTGTGTGTCT	NA	False	NA	11	True	AATAAA	-18	NA	78234337	78239982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239290
Isoform_22612_266	chr11	+	1300	5	FSM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	21	8	-3	-8	multi-exon	FALSE	canonical	3	235	junction_3	19.8557296516648	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCAGCCTGTGTGTCT	NA	False	NA	11	True	AATAAA	-18	NA	78234328	78239982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239356
Isoform_22613_53	chr11	+	1352	5	FSM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	-30	7	-30	-7	multi-exon	FALSE	canonical	3	235	junction_3	19.8557296516648	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCAGCCTGTGTGTCTA	NA	False	NA	12	True	AATAAA	-19	NA	78234277	78239983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239356
Isoform_22615_4	chr11	+	1503	4	FSM	ENSMUSG00000002058.14	ENSMUST00000149161.2	1185	4	-53	-265	-6	-3	multi-exon	FALSE	canonical	3	255	junction_2	14.613540144522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTGTGTCTATAGG	NA	False	NA	16	True	AATAAA	-23	NA	78234317	78239987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78234613_78238043_78238158_78238622_78239086_78239356
Isoform_22617_203	chr11	+	1958	5	FSM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	12	8	12	-8	multi-exon	FALSE	canonical	3	60	junction_1	12.7549010188241	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTACTGGGCTTTGGG	8349	False	NA	18	True	AGTAAA	-19	NA	78356534	78362763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196
Isoform_22619_10	chr11	+	1109	4	FSM	ENSMUSG00000020829.10	ENSMUST00000146431.3	749	4	-45	-315	8	-8	multi-exon	FALSE	canonical	3	25	junction_1	30.8796948747159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTACTGGGCTTTGGG	8345	False	NA	18	True	AGTAAA	-19	NA	78356530	78362763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78356832_78359450_78359535_78361520_78361678_78362196
Isoform_22620_668	chr11	+	1967	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	87	0	87	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1722	False	NA	18	True	ATTAAA	-15	NA	78403105	78413562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
Isoform_22621_81	chr11	+	2010	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	44	0	44	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1679	False	NA	18	True	ATTAAA	-15	NA	78403062	78413562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
Isoform_22629_16	chr11	+	2722	10	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	75	0	intron_retention	FALSE	canonical	3	1074	junction_8	51.6729984172788	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1710	False	NA	18	True	ATTAAA	-15	NA	78403093	78413562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409806_78410005_78410132_78411977_78412058_78412619
Isoform_22633_22	chr11	+	2312	11	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	75	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	336.48014800282	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1710	False	NA	18	True	ATTAAA	-15	NA	78403093	78413562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_78403632_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
Isoform_22638_5	chr11	+	2013	4	ISM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	-10	13	7	-12	intron_retention	FALSE	canonical	3	238	junction_1	112.395136312327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	23	True	AATGAA	-30	NA	78427260	78432298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785
Isoform_22639_4	chr11	+	2275	4	ISM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	61	16	-6	-16	intron_retention	FALSE	canonical	3	238	junction_1	112.395136312327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTTTCTTCTATGGT	NA	False	NA	8	True	AATAAA	-17	NA	78427247	78432547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785
Isoform_22641_12	chr11	+	1422	5	FSM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	-8	-247	-6	-5	multi-exon	FALSE	canonical	3	238	junction_1	109.732344821388	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427262	78432558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720
Isoform_22642_101	chr11	+	1060	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	76	5	-6	-5	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427262	78432558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_22644_8	chr11	+	882	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	-7	266	-7	-13	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	22	True	AATGAA	-29	NA	78427179	78432297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_22645_7	chr11	+	1136	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	0	5	0	-5	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427186	78432558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_22648_8	chr11	+	1208	4	FSM	ENSMUSG00000001105.16	ENSMUST00000152016.2	909	4	-51	-248	-6	-5	multi-exon	FALSE	canonical	3	256	junction_1	104.521130240094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427247	78432558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720
Isoform_22649_10	chr11	+	935	4	FSM	ENSMUSG00000001105.16	ENSMUST00000152016.2	909	4	-39	13	6	-13	multi-exon	FALSE	canonical	3	256	junction_1	104.521130240094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	22	True	AATGAA	-29	NA	78427259	78432297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720
Isoform_22650_70	chr11	+	831	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-6	-243	-6	-5	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427262	78432558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_22652_10	chr11	+	876	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-51	-243	31	-5	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427217	78432558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_22654_3	chr11	+	3525	3	FSM	ENSMUSG00000072640.12	ENSMUST00000141321.2	341	3	-6	-3178	-6	2159	multi-exon	FALSE	canonical	3	164	junction_1	33	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAGAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	78717423	78732260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78717463_78726843_78726985_78728915
Isoform_22655_45	chr11	+	2599	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	0	5436	0	2159	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAGAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	78717409	78732260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
Isoform_22657_46	chr11	+	536	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	18	7481	-2	114	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTCTCATTTTTGC	NA	False	NA	36	True	NA	NA	NA	78717427	78730215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
Isoform_22658_68	chr11	+	441	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	-1	7595	-1	0	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGAGGTGGTTCTCGT	NA	False	NA	20	True	AAGAAA	-13	NA	78717408	78730101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
Isoform_22662_10	chr11	+	7235	15	FSM	ENSMUSG00000017639.14	ENSMUST00000017783.13	7156	15	-80	1	-80	-1	multi-exon	FALSE	canonical	2	11	junction_1	43.0135835213359	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAACTTCTGTGG	NA	False	NA	10	True	AATAAA	-21	NA	79481957	79588848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
Isoform_22663_3	chr11	+	7181	15	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	45.8902861981372	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79481943	79588849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
Isoform_22666_72	chr11	+	7062	13	NIC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	20.8706332758097	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79551376	79588849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
Isoform_22667_24	chr11	+	6932	14	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	87	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	65	junction_13	22.8990581445029	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAACTTCTGTGG	NA	False	NA	10	True	AATAAA	-21	NA	79551474	79588848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548_79587486_79587516
Isoform_22669_23	chr11	+	6968	14	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	26	junction_2	30.1371617892272	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79551370	79588849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_79551683_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548_79587486_79587516
Isoform_2267_52	chr10	-	3727	19	NIC	ENSMUSG00000037012.19	novel	3851	22	NA	NA	371	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	146.937964570423	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	-3	True	AGTAAA	-19	NA	62175950	62104882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62127753_62127823_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
Isoform_22690_74	chr11	+	6063	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	3	-22	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	509.868305436697	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTCTTCTGCTTTTCT	NA	False	NA	14	True	CATAAA	-14	NA	79883934	79924926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79921752_79921793
Isoform_22692_3264	chr11	+	4370	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	3	0	3	0	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	3264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883934	79924949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
Isoform_22714_90	chr11	+	4301	15	FSM	ENSMUSG00000017548.16	ENSMUST00000163272.2	4303	15	3	-1	3	0	multi-exon	FALSE	canonical	3	72	junction_3	508.713027037397	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883934	79924949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
Isoform_22751_55	chr11	+	7235	23	FSM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	13	18	13	-15	multi-exon	FALSE	canonical	3	47	junction_12	23.2130360212169	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTGGTGTGTTAAATT	6012	False	NA	10	True	ATTAAA	-5	NA	79980238	80026602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
Isoform_22754_74	chr11	+	7246	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	13	13	13	-13	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	6012	False	NA	12	True	ATTAAA	-7	NA	79980238	80026604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
Isoform_22765_3	chr11	+	4213	10	ISM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	-22	-1285	-22	1285	intron_retention	FALSE	canonical	3	12	junction_2	3.01027048536535	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	80044908	80071069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871
Isoform_22768_3	chr11	+	2691	3	ISM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	18	3712	18	-3712	5prime_fragment	FALSE	canonical	3	52	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGTCTATGATTCTT	NA	False	NA	NA	False	NA	NA	NA	80074694	80086871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_80075082_80080049_80080194_80084711
Isoform_22769_98	chr11	+	1958	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	23	3	23	-3	multi-exon	FALSE	canonical	3	52	junction_2	3.96074487943871	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTTGAGTTCATTG	NA	False	NA	31	True	NA	NA	NA	80074699	80090580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
Isoform_22770_3	chr11	+	1798	4	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	26.4491125665032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGAGTTCATTGGGT	NA	False	NA	34	True	NA	NA	NA	80074699	80090583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_80075082_80080049_80080194_80087698_80087774_80089386
Isoform_22771_38	chr11	+	1813	4	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	23	-4	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	17.6131264181639	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTGTGTTGAGTTCATT	NA	False	NA	30	True	NA	NA	NA	80074699	80090579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_80075082_80084711_80084875_80087698_80087774_80089386
Isoform_22772_7	chr11	+	1651	3	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	23	-3	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTTGAGTTCATTG	NA	False	NA	31	True	NA	NA	NA	80074699	80090580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_80075082_80087698_80087774_80089386
Isoform_22774_51	chr11	+	3232	21	FSM	ENSMUSG00000017686.18	ENSMUST00000077451.14	3297	21	65	0	0	0	multi-exon	FALSE	canonical	3	23	junction_19	176.261425161605	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099909	80157638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80148339_80148463_80156567
Isoform_22777_44	chr11	+	3141	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-67	-45	-3	0	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099877	80157638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
Isoform_22778_239	chr11	+	3108	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-35	-44	0	-1	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099909	80157637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
Isoform_22786_164	chr11	+	3136	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	29	1095	0	0	multi-exon	FALSE	canonical	3	75	junction_18	152.933077899418	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099909	80157638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
Isoform_22789_731	chr11	+	3013	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	0	674	0	0	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099909	80157638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
Isoform_22790_60	chr11	+	3045	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	-32	674	-3	0	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099877	80157638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
Isoform_22792_45	chr11	+	3698	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	1	-12	1	12	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAACTGTTTCTTTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	80099910	80158324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
Isoform_22802_9	chr11	+	3793	9	FSM	ENSMUSG00000017692.9	ENSMUST00000017836.8	3736	9	-30	-27	-30	27	multi-exon	FALSE	canonical	2	4	junction_6	1.93649167310371	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACCTGCTTTGCCTGTG	7795	False	NA	NA	False	NA	NA	NA	80191707	80246808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80192098_80193489_80193514_80210383_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
Isoform_22803_4	chr11	+	1039	3	NIC	ENSMUSG00000017692.9	novel	3736	9	NA	NA	-30	-310	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTGTCAGGTTCTCTTG	7795	False	NA	NA	False	NA	NA	NA	80191707	80214674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_80192098_80210383_80210543_80214184
Isoform_22804_6	chr11	+	3774	8	NIC	ENSMUSG00000017692.9	novel	3736	9	NA	NA	-31	31	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.25876975726313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCTTTGCCTGTGTCTG	7794	False	NA	NA	False	NA	NA	NA	80191706	80246812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_80192098_80210383_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
Isoform_22807_160	chr11	+	2310	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-66	-682	0	0	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274156	80287074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
Isoform_22808_345	chr11	+	2199	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-65	-572	1	-107	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTATGCCTTTTTATT	NA	False	NA	20	True	AATAAA	-9	NA	80274157	80286964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
Isoform_2281_1862	chr10	-	3627	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	399	252	399	1	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGGAGTGGTGTTTCC	NA	False	NA	-6	True	AGTAAA	-16	NA	62175922	62104885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
Isoform_22815_163	chr11	+	2217	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	28	0	0	0	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274156	80287074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
Isoform_22816_364	chr11	+	2134	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	1	110	1	-107	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTATGCCTTTTTATT	NA	False	NA	20	True	AATAAA	-9	NA	80274129	80286964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
Isoform_22817_433	chr11	+	2106	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	29	110	1	-107	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTATGCCTTTTTATT	NA	False	NA	20	True	AATAAA	-9	NA	80274157	80286964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
Isoform_2283_29	chr10	-	3904	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	377	-3	377	3	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTCAGACAAGGGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	62175944	62104630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
Isoform_22838_175	chr11	+	1614	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	13	-1	-8	1	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	-43	True	NA	NA	NA	80319461	80362736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
Isoform_22840_67	chr11	+	1667	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	16	-57	-5	57	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319464	80362792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
Isoform_22841_1339	chr11	+	1490	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	20	1338	1	1	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	-43	True	NA	NA	NA	80319470	80362736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
Isoform_22842_772	chr11	+	1545	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	21	1282	0	57	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319471	80362792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
Isoform_22847_26	chr11	+	1452	14	NIC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	8	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	281.900796684929	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGGTGTCCTTTCTTGA	NA	False	NA	11	True	AATAAA	-15	NA	80319458	80364069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80363918
Isoform_2285_31	chr10	-	4035	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	-9	252	-9	1	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGGAGTGGTGTTTCC	NA	False	NA	-6	True	AGTAAA	-16	NA	62176330	62104885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
Isoform_22854_27	chr11	+	1440	7	FSM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	192	1	192	-1	multi-exon	FALSE	canonical	3	29	junction_1	3.67045259092421	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTAGTTACCGAGTCA	NA	False	NA	4	True	AGTAAA	-22	NA	80701192	80712858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
Isoform_22856_66	chr11	+	5916	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	-43	-76	18	0	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	11	True	AATAAA	-16	NA	82671985	82695100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_22860_5	chr11	+	3075	20	NIC	ENSMUSG00000020697.17	novel	3056	20	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	62.9095996532473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGTGTCTGTCTCTC	NA	False	NA	NA	False	ATTAAA	-34	NA	82671984	82691479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82691324
Isoform_22861_13	chr11	+	3666	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173347.8	3631	20	-37	2	14	-2	multi-exon	FALSE	canonical	0	0	junction_1	50.9559583885031	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGTATGTGGCAAGAC	NA	False	NA	18	True	TTTAAA	-14	NA	82671981	82692849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_22865_5	chr11	+	3041	20	FSM	ENSMUSG00000020697.17	ENSMUST00000080461.12	3056	20	15	0	2	0	multi-exon	FALSE	canonical	2	4	junction_19	43.9286124489467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGTGTCTGTCTCTC	NA	False	NA	NA	False	ATTAAA	-34	NA	82672025	82691479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82691324
Isoform_22867_106	chr11	+	5882	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	91	-1413	1	1	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTTTCCCCCCCAAA	NA	False	NA	12	True	AATAAA	-17	NA	82672024	82695101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_22869_7	chr11	+	4093	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	52	415	18	-415	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTCTCAAGTTACCAGT	NA	False	NA	NA	False	CATAAA	-19	NA	82671985	82693273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_22873_6	chr11	+	5979	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	-8	-1411	-8	-1	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTCCCCCCCA	NA	False	NA	10	True	AATAAA	-15	NA	82671925	82695099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_22875_42	chr11	+	5913	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173727.8	3636	20	-33	-2244	18	-4	multi-exon	FALSE	canonical	3	52	junction_3	31.7035261983143	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGTTTTTTTCCCCC	NA	False	NA	7	True	AATAAA	-12	NA	82671985	82695096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_22883_6	chr11	+	4960	3	FSM	ENSMUSG00000018986.11	ENSMUST00000019130.8	1816	3	-23	-3121	-23	3121	multi-exon	FALSE	canonical	1	4	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTTTGTCCTGAGTGT	3771	False	NA	6	True	NA	NA	NA	83082132	83109101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83082235_83103369_83104440_83105313
Isoform_22885_3	chr11	+	1204	2	ISM	ENSMUSG00000087107.9	ENSMUST00000143673.2	1428	4	898	25	325	-25	3prime_fragment	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGAGCCTTGCTCCTA	NA	False	NA	NA	False	NA	NA	NA	83115299	83117405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_83115458_83116359
Isoform_22886_21	chr11	+	2792	2	FSM	ENSMUSG00000065715.3_ENSMUSG00000093483.2	ENSMUST00000177248.2	431	2	-25	-2336	4	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGGTATTTGTTTGGG	5852	False	NA	5	True	ATTAAA	-14	NA	83182528	83185453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83182660_83182792
Isoform_22887_119	chr11	+	382	3	FSM	ENSMUSG00000093483.2	ENSMUST00000177150.2	383	3	3	-2	3	1	multi-exon	FALSE	non_canonical	0	0	junction_1	190.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATTTGTTTGGGTAAGAT	5851	False	NA	11	True	ATTAAA	-20	NA	83182527	83185459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83182660_83182792_83182924_83185340
Isoform_22888_8	chr11	+	345	3	FSM	ENSMUSG00000093483.2	ENSMUST00000176545.2	356	3	7	4	-1	-1	multi-exon	FALSE	canonical	3	49	junction_1	166	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGTATTTGTTTGGGT	5876	False	NA	6	True	ATTAAA	-15	NA	83182552	83185454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83182660_83182799_83182924_83185340
Isoform_22889_13	chr11	+	506	2	FSM	ENSMUSG00000093483.2	ENSMUST00000176016.2	471	2	-37	2	7	-1	multi-exon	FALSE	canonical	3	381	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGTATTTGTTTGGGT	5855	False	NA	6	True	ATTAAA	-15	NA	83182531	83185454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83182924_83185340
Isoform_22891_27	chr11	+	5408	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	214	3	-6	-3	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTTGTGGTATGG	2173	False	NA	NA	False	AATAAA	-13	NA	83193522	83295858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_22893_54	chr11	+	3389	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	214	2022	-6	1	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAACTGCACCTTATT	2173	False	NA	NA	False	ATTAAA	-21	NA	83193522	83293839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_22895_73	chr11	+	3340	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-70	-1	1	1	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAACTGCACCTTATT	2180	False	NA	NA	False	ATTAAA	-21	NA	83193529	83293839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_22896_95	chr11	+	3004	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-70	335	1	33	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGAACTCTTAACTGGA	2180	False	NA	13	True	AATAAA	-30	NA	83193529	83293503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_22897_38	chr11	+	5359	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-70	-2020	1	-3	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTTGTGGTATGG	2180	False	NA	NA	False	AATAAA	-13	NA	83193529	83295858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_22900_12	chr11	+	3154	4	FSM	ENSMUSG00000020684.15	ENSMUST00000108140.10	3156	4	1	1	1	0	multi-exon	FALSE	canonical	3	7	junction_2	2.94392028877595	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGTGTCAGCTCTGTT	1437	False	NA	26	True	ATTAAA	-30	NA	83300514	83311864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83300708_83303303_83303661_83308677_83308803_83309385
Isoform_22902_3	chr11	+	1207	5	ISM	ENSMUSG00000020680.16	ENSMUST00000134185.8	881	7	0	3328	0	-3160	5prime_fragment	FALSE	canonical	3	38	junction_4	6.75925291729789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTGCATTAGGAAAAACA	8654	False	NA	NA	False	NA	NA	NA	83363911	83376711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802
Isoform_22903_3	chr11	+	1676	5	ISM	ENSMUSG00000020680.16	ENSMUST00000134185.8	881	7	2	2857	2	-2689	5prime_fragment	FALSE	canonical	3	38	junction_4	6.75925291729789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	8656	False	NA	NA	False	NA	NA	NA	83363913	83377182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802
Isoform_22904_6	chr11	+	857	7	FSM	ENSMUSG00000020680.16	ENSMUST00000134185.8	881	7	25	-1	0	1	multi-exon	FALSE	canonical	3	28	junction_5	8.74960316560446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTGTAAAAAAAAAGGCT	8679	False	NA	NA	False	CATAAA	-35	NA	83363936	83380040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750
Isoform_22906_53	chr11	+	2045	16	FSM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	21	2	2	-2	multi-exon	FALSE	canonical	3	28	junction_5	25.2651714597168	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGAGTGCATTATTTG	8681	False	NA	39	True	AATAAA	-19	NA	83363938	83397567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
Isoform_22909_4	chr11	+	1026	6	NNC	ENSMUSG00000020680.16	novel	1260	11	NA	NA	13732	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	44.8713717196165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAGTGCATTATTTGT	NA	False	NA	40	True	AATAAA	-20	NA	83393584	83397568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_83393679_83395071_83395154_83395253_83395343_83395467_83395556_83395582_83395931_83397243
Isoform_22917_7	chr11	+	2561	15	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	16	7802	-2	-2965	5prime_fragment	FALSE	canonical	3	50	junction_5	7.08728381234551	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGTGGCGAGAACAGT	4033	False	NA	NA	False	AATAAA	-16	NA	83644537	83666778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526
Isoform_22918_100	chr11	+	3866	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	16	1732	-2	1	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTGTGTTTTCAAGA	4033	False	NA	5	True	AATAAA	-24	NA	83644537	83672848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
Isoform_22919_13	chr11	+	5596	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	16	2	-2	-2	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTTGGTTTCTGGGTCT	4033	False	NA	9	True	AATAAA	-18	NA	83644537	83674578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
Isoform_22923_16	chr11	+	4468	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	8	1138	8	595	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAGGGTTATATAAG	4025	False	NA	NA	False	AATAAA	-14	NA	83644529	83673442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
Isoform_22925_3	chr11	+	1163	7	ISM	ENSMUSG00000000976.14	ENSMUST00000125831.8	4067	20	-11	16998	7	-258	5prime_fragment	TRUE	canonical	2	8	junction_1	21.3124898175277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTCTGTCCACTGAG	4024	False	NA	NA	False	NA	NA	NA	83644528	83655849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711
Isoform_22931_196	chr11	+	2191	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	103	900	103	-900	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGTGTGTATGGA	NA	False	NA	21	True	AATAAA	-22	NA	83832990	83853014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
Isoform_22932_131	chr11	+	3078	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	103	13	103	-13	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAACTAAAAGTTTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	83832990	83853901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
Isoform_22933_68	chr11	+	3132	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	62	0	62	0	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTGTTTTGTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	83832949	83853914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
Isoform_22936_31	chr11	+	1897	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	38	1259	38	-1259	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTGCAGTGTAACTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	83832925	83852655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
Isoform_22938_15	chr11	+	5469	15	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	1	20798	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	19.5830257610816	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGGATGTGTGTAATT	1433	False	NA	13	True	AATAAA	-24	NA	83855254	83902911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
Isoform_22939_20	chr11	+	4055	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-13	59	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	16.6746919453981	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCCCTGCCACTGGT	1467	False	NA	NA	False	AATAAA	-17	NA	83855288	83931839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
Isoform_22940_4	chr11	+	4626	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-21	165	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	16.6746919453981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGATGATGCTCTGTCCT	1459	False	NA	NA	False	AATAAA	-18	NA	83855280	83932402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
Isoform_22942_6	chr11	+	5140	14	ISM	ENSMUSG00000034940.16	ENSMUST00000049714.15	3995	22	25	28871	-23	20796	5prime_fragment	FALSE	canonical	3	32	junction_6	19.2986494300116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGGGGATGTGTGTAA	1457	False	NA	11	True	AATAAA	-22	NA	83855278	83902909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
Isoform_22943_12	chr11	+	3754	21	NIC	ENSMUSG00000034940.16	novel	3651	21	NA	NA	-12	62	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	16.4392061852147	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCCTGCCACTGGTCTC	1468	False	NA	NA	False	AATAAA	-20	NA	83855289	83931842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
Isoform_22945_7	chr11	+	5429	15	ISM	ENSMUSG00000034940.16	ENSMUST00000183456.8	3990	23	-13	28846	-13	20795	5prime_fragment	FALSE	canonical	3	30	junction_2	23.2691658989456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGGGGATGTGTGTA	1467	False	NA	10	True	AATAAA	-21	NA	83855288	83902908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
Isoform_22946_14	chr11	+	4090	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	0	62	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	19.4608741731395	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCCTGCCACTGGTCTC	1432	False	NA	NA	False	AATAAA	-20	NA	83855253	83931842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
Isoform_22947_3	chr11	+	7616	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-15	-3	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	19.4608741731395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGGTGTCTGTTCTGA	1465	False	NA	20	True	AATAAA	-30	NA	83855286	83935401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
Isoform_22948_8	chr11	+	3747	21	FSM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	-13	-83	-13	57	multi-exon	FALSE	canonical	3	30	junction_2	19.49480700084	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGCCCCCTGCCACTG	1467	False	NA	NA	False	AATAAA	-15	NA	83855288	83931837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
Isoform_22949_4	chr11	+	7324	21	FSM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	-27	-3646	21	-4	multi-exon	FALSE	canonical	3	30	junction_2	19.49480700084	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGGTGTCTGTTCTG	1453	False	NA	19	True	AATAAA	-29	NA	83855274	83935400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
Isoform_22951_13	chr11	+	9206	56	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-36	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_51	41.1637969800914	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCACCGTTTGTCAT	NA	False	NA	7	True	AATAAA	-15	NA	84070620	84292472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
Isoform_22952_35	chr11	+	9178	55	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_50	39.807290417339	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCACCGTTTGTCAT	NA	False	NA	7	True	AATAAA	-15	NA	84070624	84292472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
Isoform_22954_18	chr11	+	9158	55	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-32	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_50	41.0147853831693	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCGTTTGTCATTTC	NA	False	NA	10	True	AATAAA	-18	NA	84070624	84292475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_84070753_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
Isoform_22955_19	chr11	+	9149	54	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-45	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_49	39.579158530227	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	12	True	AATAAA	-20	NA	84070611	84292477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_84070753_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
Isoform_22958_4	chr12	+	4713	1	FSM	ENSMUSG00000111942.2	ENSMUST00000217708.2	6092	1	3375	-1996	3375	1996	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCAGATTCTGTGCAA	NA	False	NA	NA	False	AATAAA	-41	NA	10205516	10210229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_10205500_10210200
Isoform_22966_34	chr11	+	4270	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	32.2787856029312	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGCCAACCTTTTGTT	NA	False	NA	12	True	AATAAA	-20	NA	84771150	84801944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
Isoform_22967_6	chr11	+	3856	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	35.3332930817381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCAACCTTTTGTTTT	NA	False	NA	14	True	AATAAA	-22	NA	84771188	84801946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_84771338_84771615_84771702_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
Isoform_22968_7	chr11	+	3999	27	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	39.4220262524157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-31	NA	84771150	84801955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_84771338_84771615_84771702_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
Isoform_22969_5	chr11	+	2718	3	ISM	ENSMUSG00000020527.15	ENSMUST00000020837.7	1669	6	-41	5464	16	4600	intron_retention	FALSE	canonical	3	104	junction_1	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAAAAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	84771151	84778417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_84771338_84773411_84773554_84776027
Isoform_2297_70	chr10	-	2585	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	18	1	18	-1	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTTTGTAATTGCCT	NA	False	NA	94	True	AATAGA	-17	NA	62285499	62264988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
Isoform_22970_3	chr11	+	3881	26	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	40.8682566302993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCAACCTTTTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	84771181	84801945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788184_84788290_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
Isoform_22973_4	chr11	+	4088	25	FSM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	-107	110	-107	-6	multi-exon	FALSE	canonical	3	91	junction_6	19.4264996561112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGCCAACCTTTTG	NA	False	NA	10	True	AATAAA	-18	NA	84770866	84801942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
Isoform_22979_6	chr11	+	3659	23	FSM	ENSMUSG00000020527.15	ENSMUST00000124152.8	3644	23	-17	2	-17	-2	multi-exon	FALSE	canonical	3	18	junction_8	38.7069942640691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-31	NA	84771161	84801955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
Isoform_2298_540	chr10	-	2414	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	19	171	19	-40	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCACACGGCATTCTCTG	NA	False	NA	-24	True	AATAAA	-18	NA	62285498	62265158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
Isoform_22981_3	chr11	+	3837	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	14	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	42.2903324912707	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84771149	84801948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
Isoform_22982_5	chr11	+	4146	3	NIC	ENSMUSG00000085628.5	novel	635	4	NA	NA	30	3649	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCTAACTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	85126026	85132779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_85126159_85128236_85128341_85128869
Isoform_22984_150	chr11	+	2147	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	0	752	0	-752	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTATTTTGGCCTTG	7706	False	NA	30	True	AATAAA	-30	NA	85202069	85237140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
Isoform_22985_148	chr11	+	2897	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	2	0	2	0	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGGCGTTTTGTTGG	7708	False	NA	3	True	AATAAA	-13	NA	85202071	85237892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
Isoform_22986_12	chr11	+	2995	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	117	-213	117	213	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCGCCGAGATTCTATAAA	7823	False	NA	NA	False	AGTAAA	-31	NA	85202186	85238105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
Isoform_22987_6	chr11	+	2193	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	-51	757	-51	-757	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACAGTTTTATTTTGG	7655	False	NA	25	True	AATAAA	-25	NA	85202018	85237135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
Isoform_2299_195	chr10	-	2461	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	20	123	20	8	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTGTTTGTTTG	NA	False	NA	24	True	NA	NA	NA	62285497	62265110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
Isoform_22994_7	chr11	+	3664	26	NNC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	37.4124257433276	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCTGAGTTGCTGGGG	3491	False	NA	11	True	AATAAA	-19	NA	85244005	85716881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_85244060_85245419_85245488_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85712848_85712939_85716027
Isoform_22995_11	chr11	+	3591	25	NIC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	31.2925266193419	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGTTGCTGGGGTC	3476	False	NA	13	True	AATAAA	-21	NA	85243990	85716883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_85244060_85245419_85245488_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
Isoform_2300_118	chr10	-	2447	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	-12	169	-12	-38	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACACGGCATTCTCTGCC	NA	False	NA	-22	True	AATAAA	-20	NA	62285529	62265156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
Isoform_23000_8	chr11	+	3594	25	NIC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	32.682394173146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGTTGCTGGGGTC	3491	False	NA	13	True	AATAAA	-21	NA	85244005	85716883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_85244060_85245419_85245506_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
Isoform_23003_30	chr11	+	3666	26	NIC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_24	29.6904024896935	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3491	False	NA	14	True	AATAAA	-22	NA	85244005	85716884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85704825_85704892_85712847_85712939_85716027
Isoform_23005_7	chr11	+	3589	25	NIC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	30.4849404989123	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTTGCTGGGGTCAG	3478	False	NA	15	True	AATAAA	-23	NA	85243992	85716885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85704825_85704892_85716027
Isoform_23006_49	chr11	+	3612	25	NIC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_23	26.6291076643586	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGTTGCTGGGGTC	3478	False	NA	13	True	AATAAA	-21	NA	85243992	85716883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85712847_85712939_85716027
Isoform_23008_126	chr11	+	3522	24	FSM	ENSMUSG00000059439.16	ENSMUST00000092821.10	2769	24	-45	-708	0	0	multi-exon	FALSE	canonical	3	61	junction_23	18.8377812860411	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3478	False	NA	14	True	AATAAA	-22	NA	85243992	85716884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
Isoform_23012_43	chr11	+	2761	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	17	1645	4	-1645	multi-exon	FALSE	canonical	3	24	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTCTCTGTTTCTGTG	NA	False	NA	9	True	NA	NA	NA	86092212	86100373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86092379_86097778
Isoform_23013_8	chr11	+	2359	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	-10	2074	-10	-2074	multi-exon	FALSE	canonical	3	24	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGCTATAATTTCATGAC	NA	False	NA	NA	False	NA	NA	NA	86092185	86099944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86092379_86097778
Isoform_23014_7	chr11	+	3624	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	-21	820	-21	-820	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCTGTTTCCAAGA	NA	False	NA	NA	False	AGTAAA	-11	NA	86092174	86101198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86092379_86097778
Isoform_23016_298	chr11	+	1953	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	22	2477	-6	-2477	multi-exon	FALSE	canonical	3	265	junction_2	21.9146070008111	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGACCTGTTATGTA	NA	False	NA	7	True	AATAAA	-18	NA	86375504	86387374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
Isoform_23017_70	chr11	+	2001	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	-26	2477	-26	-2477	multi-exon	TRUE	canonical	3	265	junction_2	21.9146070008111	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGACCTGTTATGTA	NA	False	NA	7	True	AATAAA	-18	NA	86375456	86387374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
Isoform_2302_16	chr10	-	2615	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	-14	3	-14	-3	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATTTTTGTAATTGC	NA	False	NA	92	True	AATAGA	-15	NA	62285531	62264990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
Isoform_23020_4	chr11	+	1873	8	NIC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	-4	-2478	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	104.417920113438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGGACCTGTTATGT	NA	False	NA	6	True	AATAAA	-17	NA	86375506	86387373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_86375626_86376886_86377332_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
Isoform_23021_4	chr11	+	3236	8	NIC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	-4	-2481	intron_retention	FALSE	canonical	3	265	junction_1	21.9144905931939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGGTGGACCTGTTA	NA	False	NA	3	True	AATAAA	-14	NA	86375478	86387370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
Isoform_23023_10	chr11	+	1946	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	-75	0	-75	0	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGTCTGTTAAGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	86435741	86458186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
Isoform_23024_27	chr11	+	1871	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGTCTGTTAAGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	86435816	86458186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
Isoform_23027_3	chr11	+	763	3	NNC	ENSMUSG00000072582.10	novel	3132	3	NA	NA	96	-2272	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTCTGTTCCCATGTT	NA	False	NA	14	True	AATAAA	-21	NA	86574906	86581011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_86574950_86578861_86578955_86580384
Isoform_23028_13	chr11	+	2835	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	53	150	53	-150	multi-exon	FALSE	canonical	3	249	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTTTTACTCATGA	NA	False	NA	2	True	AATAAA	-10	NA	86574863	86583133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86574950_86580384
Isoform_23029_120	chr11	+	673	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	96	2269	96	-2269	multi-exon	FALSE	canonical	3	249	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTTCCCATGTTCCT	NA	False	NA	17	True	AATAAA	-24	NA	86574906	86581014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86574950_86580384
Isoform_23030_18	chr11	+	878	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	-109	2269	-109	-2269	multi-exon	FALSE	canonical	3	249	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTTCCCATGTTCCT	NA	False	NA	17	True	AATAAA	-24	NA	86574701	86581014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_86574950_86580384
Isoform_23037_38	chr11	+	1237	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	27	1773	10	755	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTTTTAGACTTTCT	NA	False	NA	3	True	AATAAA	-21	NA	87000086	87013688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
Isoform_23038_8	chr11	+	1311	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	-47	1773	-47	755	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTTTTAGACTTTCT	NA	False	NA	3	True	AATAAA	-21	NA	87000012	87013688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
Isoform_23042_26	chr11	+	3040	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTCCATGTTATATT	NA	False	NA	13	True	AATAAA	-21	NA	87000056	87015461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
Isoform_23044_3	chr11	+	2968	4	ISM	ENSMUSG00000020492.12	ENSMUST00000142263.8	861	5	10	0	10	0	intron_retention	FALSE	canonical	3	5	junction_1	91.9818822739928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTCCATGTTATAT	NA	False	NA	12	True	AATAAA	-20	NA	87000086	87015460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_87000131_87006970_87007017_87008493_87008671_87012759
Isoform_23051_194	chr11	+	4429	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	-1	1204	-1	-1204	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCTCTGCAGTTT	1915	False	NA	22	True	AATAAA	-12	NA	87017901	87110305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
Isoform_23052_28	chr11	+	5632	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	-1	1	-1	-1	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTTGTTGTTTTAT	1915	False	NA	12	True	AATAAA	-14	NA	87017901	87111508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
Isoform_23053_291	chr11	+	4317	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	112	1203	112	-1203	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCTCTGCAGTTTA	2028	False	NA	23	True	AATAAA	-13	NA	87018014	87110306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
Isoform_23054_57	chr11	+	5518	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	111	3	111	-3	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTGTTTTGTTGTTTT	2027	False	NA	10	True	AATAAA	-12	NA	87018013	87111506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
Isoform_23057_165	chr11	+	3561	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-2	30187	at_least_one_novel_splicesite	TRUE	canonical	3	225	junction_24	67.5794671109502	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTTTGTCATAATTT	1914	False	NA	4	True	NA	NA	NA	87017900	87141696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
Isoform_23058_253	chr11	+	3447	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	112	30187	at_least_one_novel_splicesite	FALSE	canonical	3	225	junction_24	67.5794671109502	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTTTGTCATAATTT	2028	False	NA	4	True	NA	NA	NA	87018014	87141696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
Isoform_23077_6	chr11	+	3289	15	ISM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	0	38572	0	32485	5prime_fragment	FALSE	canonical	1	19	junction_12	15.5556932290636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87295890	87408077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493
Isoform_23079_27	chr11	+	4839	31	FSM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	-76	0	-76	0	multi-exon	FALSE	canonical	1	19	junction_12	24.6584671056414	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295814	87446649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
Isoform_23080_98	chr11	+	4762	31	FSM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	0	1	0	-1	multi-exon	FALSE	canonical	1	19	junction_12	24.6584671056414	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295890	87446648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
Isoform_23081_9	chr11	+	4684	30	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	11	junction_25	28.6387977613865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295890	87446648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
Isoform_23083_5	chr11	+	4677	29	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-86	0	combination_of_known_splicesites	FALSE	canonical	1	18	junction_25	27.8112029621892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295804	87446649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87440257_87440351_87442356_87442467_87445753_87445806_87446309
Isoform_23086_9	chr11	+	4719	20	NIC	ENSMUSG00000018401.18	novel	4664	19	NA	NA	-18	6	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	38.4952419983262	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCCCCATGTTGTCTT	NA	False	NA	9	True	AATAAA	-22	NA	87483026	87506004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87483077_87483723_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_23088_33	chr11	+	4594	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	35	1124	-22	6	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCCCCATGTTGTCTT	NA	False	NA	9	True	AATAAA	-22	NA	87483022	87506004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_23090_29	chr11	+	5760	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	-12	5	-12	-5	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCTTTT	NA	False	NA	15	True	AATAAA	-15	NA	87482975	87507123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_23093_58	chr11	+	4720	18	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	23.4398294690113	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCCCCATGTTGTCTT	NA	False	NA	9	True	AATAAA	-22	NA	87486477	87506004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_23094_58	chr11	+	5839	18	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	23.4398294690113	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCTTTT	NA	False	NA	15	True	AATAAA	-15	NA	87486477	87507123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_23095_4	chr11	+	5911	18	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	-72	-5	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	23.4398294690113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCTTTT	NA	False	NA	15	True	AATAAA	-15	NA	87486405	87507123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_23101_7	chr11	+	831	6	FSM	ENSMUSG00000020485.15	ENSMUST00000152700.8	854	6	17	6	16	0	multi-exon	FALSE	canonical	3	12	junction_2	256.77351888386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGGGTACTGAGGCCT	NA	False	NA	2	True	AATAAA	-19	NA	87628394	87634443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87628495_87628992_87629100_87631330_87631473_87633621_87633678_87633883_87633938_87634071
Isoform_23102_311	chr11	+	673	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	33	0	32	0	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGGGTACTGAGGCCT	NA	False	NA	2	True	AATAAA	-19	NA	87628410	87634443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
Isoform_23103_5	chr11	+	1679	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	-19	-954	-19	948	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGTGTAAAGTTTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	87628358	87635397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
Isoform_23104_326	chr11	+	2498	18	FSM	ENSMUSG00000034121.13	ENSMUST00000038196.7	2499	18	0	1	0	-1	multi-exon	FALSE	canonical	3	107	junction_1	22.9555008070187	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	6456	False	NA	17	True	TATAAA	-19	NA	87744040	87754628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_23105_9	chr11	+	3107	17	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	107	junction_1	23.653422056861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTCTGTGGACTCTCGT	6454	False	NA	16	True	TATAAA	-18	NA	87744038	87754627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_23113_32	chr11	+	2980	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	-39	7	-39	-7	multi-exon	FALSE	canonical	3	1310	junction_1	135	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAACGATGCATGGTTG	6556	False	NA	14	True	AATAAA	-8	NA	87938504	87942309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87938859_87939315_87939501_87939868
Isoform_23119_985	chr11	+	2744	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	348	2270	3	-5	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGATGCATGGTTGTC	6598	False	NA	16	True	AATAAA	-10	NA	87938546	87942311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
Isoform_23125_104	chr11	+	3208	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	350	1804	-2	461	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCATAGAGTGTTCTGT	6600	False	NA	3	True	AATAAA	-17	NA	87938548	87942777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
Isoform_23128_48	chr11	+	2847	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	245	2270	-100	-5	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGATGCATGGTTGTC	6495	False	NA	16	True	AATAAA	-10	NA	87938443	87942311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
Isoform_23136_65	chr11	+	5030	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	329	3	-16	-3	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATTGAGATTTAAGTTC	6579	False	NA	17	True	AATAAA	-19	NA	87938527	87944578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
Isoform_23142_57	chr11	+	1860	5	NIC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	275	junction_4	487.699190075194	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6600	False	NA	15	True	AATAAA	-9	NA	87938548	87942310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87941802
Isoform_23145_115	chr11	+	2059	4	NIC	ENSMUSG00000018379.18	novel	896	4	NA	NA	3	-5	intron_retention	FALSE	canonical	3	275	junction_3	562.44999777758	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGATGCATGGTTGTC	6598	False	NA	16	True	AATAAA	-10	NA	87938546	87942311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87938859_87939315_87939501_87939868_87940922_87941802
Isoform_23156_7	chr11	-	2421	3	Antisense	novelGene_ENSMUSG00000018379.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCATCTTCCGCGTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	87942316	87939331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_87939498_87939865_87940040_87940235
Isoform_2316_1735	chr10	-	2547	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	47	3	-12	-3	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	1735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAACTTAAGTTTGTA	5245	False	NA	-14	True	AATAAA	-9	NA	62322537	62291058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
Isoform_23166_12	chr11	+	3616	6	NIC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-19	-1004	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	44.5268458348444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTAGCTATGACTTT	NA	False	NA	10	True	AATAAA	-15	NA	87959085	87974551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87959260_87963882_87964578_87965487_87965552_87966998_87967201_87969228_87969382_87972223
Isoform_23167_10	chr11	+	4617	6	NIC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	44.5268458348444	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGGACTGTTAATGCC	NA	False	NA	15	True	ATTAAA	-20	NA	87959086	87975553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87959260_87963882_87964578_87965487_87965552_87966998_87967201_87969228_87969382_87972223
Isoform_23171_12	chr11	+	3754	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-172	1001	-172	-1001	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCTATGACTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	87958932	87974554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
Isoform_23173_7	chr11	+	4757	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-176	2	-176	-2	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGGACTGTTAATGCC	NA	False	NA	15	True	ATTAAA	-20	NA	87958928	87975553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
Isoform_23174_34	chr11	+	4600	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-18	1	-18	-1	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGACTGTTAATGCCG	NA	False	NA	16	True	ATTAAA	-21	NA	87959086	87975554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
Isoform_23178_8	chr11	+	5660	6	NNC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-18	-1005	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	40.4257343779924	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTAGCTATGACTT	NA	False	NA	9	True	AATAAA	-14	NA	87959086	87974550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87970159
Isoform_23179_7	chr11	+	1994	6	FSM	ENSMUSG00000018378.14	ENSMUST00000133149.2	1844	6	7	-157	7	157	multi-exon	FALSE	canonical	2	4	junction_1	7.56306816047562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAAAGAAGAAG	3486	False	NA	NA	False	NA	NA	NA	87990122	88076348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459
Isoform_23180_15	chr11	+	1773	11	FSM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	157	1250	13	-114	multi-exon	FALSE	canonical	2	4	junction_1	5.85234995535981	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCCCCCTTTCCAGAA	3492	False	NA	NA	False	NA	NA	NA	87990128	88083716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
Isoform_23181_13	chr11	+	3093	11	FSM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	82	5	-62	-5	multi-exon	FALSE	canonical	2	4	junction_1	5.85234995535981	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGTGGCCAGCGGCGT	3417	False	NA	18	True	AATAAA	-22	NA	87990053	88084961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
Isoform_23182_4	chr11	+	3300	11	FSM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	-125	5	-125	-5	multi-exon	FALSE	canonical	2	4	junction_1	5.85234995535981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGTGGCCAGCGGCGT	3210	False	NA	18	True	AATAAA	-22	NA	87989846	88084961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
Isoform_23184_140	chr11	+	1293	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	39	0	3	0	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095252	88102333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
Isoform_23187_25	chr11	+	1392	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	12	0	-1	0	multi-exon	FALSE	canonical	3	37	junction_1	110.143939915004	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095248	88102333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
Isoform_23190_55	chr11	+	578	3	ISM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	2	18496	2	-17837	5prime_fragment	FALSE	canonical	3	638	junction_1	568	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGCTCTCGCGTCATA	9433	False	NA	13	True	AATAAA	-45	NA	88861079	88863943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_88861099_88861243_88861306_88863446
Isoform_23192_15	chr11	+	619	3	ISM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	-39	18496	-39	-17837	5prime_fragment	FALSE	canonical	3	638	junction_1	568	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGCTCTCGCGTCATA	9392	False	NA	13	True	AATAAA	-45	NA	88861038	88863943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_88861099_88861243_88861306_88863446
Isoform_23193_6	chr11	+	918	3	ISM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	-33	18191	-33	-17532	5prime_fragment	FALSE	canonical	3	638	junction_1	568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTAGCTTTCTGACTC	9398	False	NA	NA	False	NA	NA	NA	88861044	88864248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_88861099_88861243_88861306_88863446
Isoform_23194_13	chr11	+	4002	9	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	336	junction_4	463.976275659651	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACTCTGAGTTATGT	9432	False	NA	14	True	AATAAA	-16	NA	88861078	88882438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_88861099_88861243_88861306_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
Isoform_23195_85	chr11	+	1011	2	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-17547	intron_retention	FALSE	canonical	3	1774	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATCTTCCTATTTAT	9435	False	NA	NA	False	NA	NA	NA	88861081	88864233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_88861306_88863446
Isoform_23199_103	chr11	+	724	2	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	1	-17837	intron_retention	FALSE	canonical	3	1774	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGCTCTCGCGTCATA	9432	False	NA	13	True	AATAAA	-45	NA	88861078	88863943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_88861306_88863446
Isoform_23203_18	chr11	+	3989	9	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	499.167040553561	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACTCTGAGTTATGT	9431	False	NA	14	True	AATAAA	-16	NA	88861077	88882438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_88861085_88861243_88861306_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
Isoform_23204_21	chr11	+	4144	8	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-1	intron_retention	FALSE	canonical	3	336	junction_3	495.280419436859	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACTCTGAGTTATGT	9435	False	NA	14	True	AATAAA	-16	NA	88861081	88882438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_88861306_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
Isoform_23208_1083	chr11	+	2592	7	FSM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	14	1	14	-1	multi-exon	FALSE	canonical	3	336	junction_2	22.1616535684702	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACTCTGAGTTATGT	-15	True	NA	14	True	AATAAA	-16	NA	88864774	88882438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
Isoform_23215_16	chr11	+	2725	6	NIC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	347	junction_1	21.2847363150216	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACTCTGAGTTATGT	NA	False	NA	14	True	AATAAA	-16	NA	88864762	88882438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_88865029_88871894_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
Isoform_23225_308	chr11	+	5467	10	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	180.202012841419	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890278	88911119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020_88910662_88910707
Isoform_23226_146	chr11	+	5501	10	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	43	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	180.202012841419	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890244	88911119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020_88910662_88910707
Isoform_23237_11	chr11	+	780	2	ISM	ENSMUSG00000110344.2	ENSMUST00000134929.8	2031	4	61764	-7	61764	7	3prime_fragment	FALSE	canonical	3	25	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTTTAATGGACAGAA	NA	False	NA	NA	False	AATAAA	-23	NA	90140273	90142088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_90140562_90141596
Isoform_23238_137	chr11	+	2694	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	-33	16	-13	-16	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGTCTGGAGCATAT	NA	False	NA	13	True	AATAAA	-18	NA	90140268	90169399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
Isoform_23242_13	chr11	+	2261	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	11	-1048	11	1048	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTTACAATATTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	90529009	90536805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
Isoform_23246_154	chr11	+	1216	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	13	-5	13	5	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGACAACTTGATTTCT	NA	False	NA	15	True	NA	NA	NA	90529011	90535762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
Isoform_2325_31	chr10	-	2397	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	3	63	junction_7	346.299504675903	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAACTTAAGTTTGTA	5245	False	NA	-14	True	AATAAA	-9	NA	62322537	62291058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62322436
Isoform_23251_5	chr11	+	4401	5	NNC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	12	3214	intron_retention	FALSE	non_canonical	0	0	junction_4	150.242096297942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTACTCTTAAGGGCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	90529010	90538971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195_90538786_90538810
Isoform_23252_5	chr11	+	5324	17	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-22	5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	41.7655285492713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTTCAACATTGATT	NA	False	NA	24	True	AATAAA	-25	NA	93776655	93837816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_93776889_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_23254_4	chr11	+	5216	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107853.8	5245	16	27	2	13	-2	multi-exon	FALSE	canonical	3	14	junction_1	36.201657420621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATCAATTTTTCAAC	NA	False	NA	17	True	AATAAA	-18	NA	93776704	93837809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_93776889_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_23256_6	chr11	+	5240	16	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	43.6513459128124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTATTTTATCAATTT	NA	False	NA	11	True	AATAAA	-12	NA	93776680	93837803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_93776889_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_23258_12	chr11	+	5382	18	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-43	-7	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	41.2407061984984	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTATTTTATCAATTTT	NA	False	NA	12	True	AATAAA	-13	NA	93776989	93837804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_23261_8	chr11	+	5451	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-37	5	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	40.9622062851844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTTCAACATTGATT	NA	False	NA	24	True	AATAAA	-25	NA	93776995	93837816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
Isoform_23263_31	chr11	+	5332	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-37	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	31.7736132663567	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCAATTTTTCAACA	NA	False	NA	18	True	AATAAA	-19	NA	93776995	93837810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_23267_6	chr11	+	3597	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107854.9	5232	16	-48	1683	-36	-19	multi-exon	FALSE	canonical	3	19	junction_1	35.1887608319601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93776996	93836128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_23268_10	chr11	+	5241	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107854.9	5232	16	-17	8	-5	-8	multi-exon	FALSE	canonical	3	19	junction_1	35.1887608319601	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTATTTTATCAATTT	NA	False	NA	11	True	AATAAA	-12	NA	93777027	93837803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_23269_3	chr11	+	5281	16	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-37	-6	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	42.8555195459763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93776995	93837805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_93777243_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_2327_240	chr10	-	2479	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5245	False	NA	-6	True	AATAAA	-17	NA	62322537	62291050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
Isoform_23273_5	chr11	+	2424	17	ISM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-71	33102	-59	-1246	5prime_fragment	FALSE	canonical	3	49	junction_7	9.91822029146359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGGGTGGGTGGGTATG	605	False	NA	NA	False	NA	NA	NA	93886857	93983809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640
Isoform_23276_26	chr11	+	4788	29	FSM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-47	2599	-35	-2594	multi-exon	FALSE	canonical	3	49	junction_7	9.62220009633335	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAAAGTTTACGAAGCCT	629	False	NA	38	True	AATAAA	-26	NA	93886881	94014312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
Isoform_23278_27	chr11	+	7345	29	FSM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-10	5	2	0	multi-exon	FALSE	canonical	3	49	junction_7	9.62220009633335	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTGTGAAGTCTAGT	666	False	NA	4	True	TATAAA	-11	NA	93886918	94016906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
Isoform_23279_3	chr11	+	6976	26	FSM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	-138	2	12	0	multi-exon	FALSE	canonical	3	8	junction_1	14.9277727742621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGAAGTCTAGTGTG	NA	False	NA	7	True	TATAAA	-14	NA	93934955	94016909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
Isoform_23280_3	chr11	+	6902	26	FSM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	-65	3	-2	-1	multi-exon	FALSE	canonical	3	8	junction_1	14.9277727742621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTGAAGTCTAGTGT	NA	False	NA	6	True	TATAAA	-13	NA	93935028	94016908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
Isoform_23282_18	chr11	+	487	4	FSM	ENSMUSG00000086003.8	ENSMUST00000155965.2	473	4	-17	3	0	-3	multi-exon	FALSE	canonical	3	69	junction_1	38.4967531098403	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTGTTTACCTGCTT	NA	False	NA	12	True	AATAAA	-19	NA	94024310	94046599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94024382_94029312_94029490_94046281_94046324_94046402
Isoform_23285_725	chr11	+	2291	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	-13	10	-13	-10	multi-exon	FALSE	canonical	3	252	junction_1	0	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAAATGCCTATCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	94102266	94106311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94102558_94104311
Isoform_23292_21	chr11	+	1421	5	FSM	ENSMUSG00000020864.14	ENSMUST00000021227.6	1215	5	-201	-5	40	5	multi-exon	FALSE	canonical	3	24	junction_4	194.973075064225	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAATTTTAATCCAT	4046	False	NA	NA	False	AATAAA	-15	NA	94218878	94230340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230065
Isoform_23303_198	chr11	+	3465	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	21	1	9	-1	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCCATTCTCTCTCGT	4015	False	NA	16	True	ATTAAA	-17	NA	94218847	94232666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
Isoform_23314_447	chr11	+	2849	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	-12	0	-12	0	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520580	94536042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
Isoform_23315_6635	chr11	+	2808	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	29	0	-18	0	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	6635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520621	94536042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
Isoform_23341_13	chr11	+	799	4	FSM	ENSMUSG00000024414.14	ENSMUST00000132813.8	655	4	18	-162	18	-9	multi-exon	FALSE	canonical	3	14	junction_1	381.100453365718	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGAGATGGAAAGGG	NA	False	NA	10	True	NA	NA	NA	94544619	94550906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94544668_94547233_94547445_94547808_94547877_94550434
Isoform_23342_497	chr11	+	731	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	16	9	7	-9	multi-exon	FALSE	canonical	3	766	junction_3	47.8632310744781	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGAGATGGAAAGGG	NA	False	NA	10	True	NA	NA	NA	94544608	94550906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
Isoform_23344_30	chr11	+	822	4	FSM	ENSMUSG00000024414.14	ENSMUST00000125148.2	439	4	-20	-363	0	-9	multi-exon	FALSE	canonical	3	93	junction_1	344.111416065592	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGAGATGGAAAGGG	NA	False	NA	10	True	NA	NA	NA	94544836	94550906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94544987_94547312_94547445_94547808_94547877_94550434
Isoform_23348_3	chr11	+	1332	5	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	13791	1145	4647	-1145	3prime_fragment	FALSE	canonical	2	4	junction_1	14.6180539060437	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTCCTCTTGCTTGAA	NA	False	NA	NA	False	AAAAAG	-4	NA	94840840	94842723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
Isoform_2335_3	chr10	-	1141	4	FSM	ENSMUSG00000020077.15	ENSMUST00000160987.8	1727	4	-10	596	-10	-1	multi-exon	FALSE	canonical	2	4	junction_3	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGTGGCTATGTGACATG	NA	False	NA	-3	True	AATAAA	-20	NA	62363240	62330207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62330886_62333557_62333703_62343420_62343616_62363117
Isoform_23350_5	chr11	+	2075	4	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	14275	4	5131	-4	3prime_fragment	FALSE	canonical	3	18	junction_2	9.67241208569794	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGCATGTGCAGTGGCC	NA	False	NA	NA	False	AATAAA	-16	NA	94841324	94843864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_94841400_94841534_94841726_94841926_94842170_94842298
Isoform_23353_14	chr11	+	4557	10	FSM	ENSMUSG00000038976.13	ENSMUST00000038696.12	4508	10	-49	0	-49	0	multi-exon	FALSE	canonical	3	26	junction_2	8.0691456246068	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCGCCTGGTTTCTTGA	NA	False	NA	20	True	CATAAA	-16	NA	94881811	94897725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_94883745_94887360_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
Isoform_2336_522	chr10	-	2440	7	FSM	ENSMUSG00000036955.17	ENSMUST00000065887.14	2472	7	31	1	-10	-1	multi-exon	FALSE	canonical	3	136	junction_2	17.3629554575891	522	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTTATTACCTCTTT	8232	False	NA	-1	True	AATAAA	-21	NA	62414205	62394249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
Isoform_23367_5	chr11	+	2139	8	Fusion	ENSMUSG00000085143.2_ENSMUSG00000038893.13	novel	400	2	NA	NA	-42	-1	multi-exon	FALSE	canonical	0	0	junction_1	21.4637805978122	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGGTTTTCTGAATAC	NA	False	NA	12	True	AATAAA	-14	NA	95201212	95272697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr11_+_95201280_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
Isoform_23368_5	chr11	+	2146	9	NIC	ENSMUSG00000038893.13	novel	2317	8	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	20.0997512422418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGGGTTTTCTGAAT	NA	False	NA	10	True	AATAAA	-12	NA	95227843	95272695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_95227877_95228044_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
Isoform_23369_3	chr11	+	2504	9	NIC	ENSMUSG00000038893.13	novel	2317	8	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_1	25.0199920063936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGGGTTTTCTGAATA	NA	False	NA	11	True	AATAAA	-13	NA	95227843	95272696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_95228088_95246491_95246681_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
Isoform_23370_177	chr11	+	2317	8	FSM	ENSMUSG00000038893.13	ENSMUST00000037502.7	2317	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	7.85324578679129	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTTTCTGAATACC	NA	False	NA	13	True	AATAAA	-15	NA	95227843	95272698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
Isoform_23373_218	chr11	+	1307	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	213	3	-1	-3	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGCGAGACCCTGCTGC	NA	False	NA	18	True	AATAAA	-19	NA	95275730	95282599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
Isoform_23376_55	chr11	+	1284	9	FSM	ENSMUSG00000020873.16	ENSMUST00000131193.3	1299	9	14	1	-1	-1	multi-exon	FALSE	canonical	3	66	junction_2	72.2789734293453	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCGAGACCCTGCTGCTG	NA	False	NA	20	True	AATAAA	-21	NA	95275730	95282601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95275940_95276626_95276731_95277336_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
Isoform_23377_4	chr11	+	1503	9	FSM	ENSMUSG00000020873.16	ENSMUST00000131193.3	1299	9	-213	9	-14	-9	multi-exon	FALSE	canonical	3	66	junction_2	72.2789734293453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAAGTGCGAGACCC	NA	False	NA	12	True	AATAAA	-13	NA	95275503	95282593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95275940_95276626_95276731_95277336_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
Isoform_23379_12	chr11	+	1886	8	NIC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	260	junction_3	11.771636613973	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGCGAGACCCTGCT	NA	False	NA	16	True	AATAAA	-17	NA	95275730	95282597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_95275940_95276626_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
Isoform_23380_76	chr11	+	2477	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	12	392	-3	-392	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTATCTCTGGTCT	NA	False	NA	5	True	TATAAA	-17	NA	95304917	95383840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23389_21	chr11	+	2874	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	4	3	4	-3	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTCCTGTCATTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	95304909	95384229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23390_21	chr11	+	2503	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	-15	393	-15	-393	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTATCTCTGGTC	NA	False	NA	4	True	TATAAA	-16	NA	95304890	95383839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23391_10	chr11	+	2406	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-3	-388	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	92.4878370381749	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATCTCTGGTCTTTTG	NA	False	NA	9	True	TATAAA	-21	NA	95304917	95383844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365131_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23392_8	chr11	+	2120	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-26	-797	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.6534202795881	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTGTGGAAAATGGAT	NA	False	NA	NA	False	GATAAA	-20	NA	95304879	95383435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23394_35	chr11	+	2488	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-5	-393	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.6534202795881	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTATCTCTGGTC	NA	False	NA	4	True	TATAAA	-16	NA	95304915	95383839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23395_11	chr11	+	2864	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.6534202795881	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTCCTGTCATTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	95304929	95384229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23397_222	chr11	+	2638	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	32	393	32	-393	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTATCTCTGGTC	NA	False	NA	4	True	TATAAA	-16	NA	95304955	95383839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23398_48	chr11	+	3044	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	16	3	16	-3	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTCCTGTCATTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	95304939	95384229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23402_7	chr11	+	3098	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	-36	1	-18	-1	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTCCTGTCATTGATGT	NA	False	NA	NA	False	AATAAA	-19	NA	95304887	95384231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23404_19	chr11	+	2679	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	-8	392	-5	-392	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTATCTCTGGTCT	NA	False	NA	5	True	TATAAA	-17	NA	95304915	95383840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_23408_1162	chr11	+	1756	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	43	0	0	0	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGGTGTGTTTTCAATT	NA	False	NA	11	True	AATAAA	-25	NA	95557825	95571599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
Isoform_23409_3366	chr11	+	1019	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	43	737	0	328	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	3366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCAAGCGAAGCTTTTA	NA	False	NA	8	True	AATAAA	-24	NA	95557825	95570862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
Isoform_23423_4	chr11	+	2548	6	NIC	ENSMUSG00000075595.10	novel	3982	6	NA	NA	-136	4	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	20.899760764181	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATTCTCAAAGATGCAT	NA	False	NA	9	True	GATAAA	-19	NA	95603700	95655541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_95604055_95639825_95640434_95643700_95643849_95644187_95644304_95644736_95644882_95654364
Isoform_23428_27	chr11	+	3098	6	NIC	ENSMUSG00000075595.10	novel	6568	7	NA	NA	-149	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	14.0285423334001	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGATTCTCAAAGATG	NA	False	NA	6	True	GATAAA	-16	NA	95603687	95655538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_95604055_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
Isoform_23432_25	chr11	+	2041	3	FSM	ENSMUSG00000050860.7	ENSMUST00000150134.2	590	3	-12	-1439	-12	0	multi-exon	FALSE	canonical	3	31	junction_2	1.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGGACTTGTTCTCTTG	2185	False	NA	20	True	AATAAA	-16	NA	95715312	95722966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95715536_95719491_95719602_95721258
Isoform_23433_6	chr11	+	1903	3	FSM	ENSMUSG00000050860.7	ENSMUST00000054173.4	1910	3	6	1	6	-1	multi-exon	FALSE	canonical	3	8	junction_2	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGGACTTGTTCTCTT	2204	False	NA	19	True	AATAAA	-15	NA	95715331	95722965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95715536_95719491_95719602_95721376
Isoform_23434_4	chr11	+	559	4	FSM	ENSMUSG00000038811.14	ENSMUST00000107714.9	558	4	-4	3	-4	-3	multi-exon	FALSE	canonical	2	7	junction_2	4.54606056566195	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTCGGAGTGGATTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	95733116	95736557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95733253_95734637_95734722_95735876_95735967_95736308
Isoform_23435_19	chr11	+	328	2	FSM	ENSMUSG00000086015.2	ENSMUST00000146868.2	1269	2	26	915	26	-915	multi-exon	TRUE	canonical	3	111	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGCTATTGTATAAGT	1052	False	NA	8	True	AATATA	-19	NA	95749716	95750955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95749909_95750819
Isoform_23439_778	chr11	+	932	8	FSM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	50	22	-16	-22	multi-exon	FALSE	canonical	3	665	junction_5	23.859281341282	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTCATTCCAAGT	3247	False	NA	-1	True	AATAAA	-21	NA	95925760	95938234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
Isoform_23441_70	chr11	+	870	7	FSM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	-43	22	-29	-22	multi-exon	FALSE	canonical	3	60	junction_6	239.545866635645	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTCATTCCAAGT	3234	False	NA	-1	True	AATAAA	-21	NA	95925747	95938234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95938020
Isoform_23443_7	chr11	+	1360	2	FSM	ENSMUSG00000049604.4	ENSMUST00000062709.4	2206	2	-9	855	-9	-855	multi-exon	FALSE	canonical	2	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACAGTTTCCTCTCAGA	3935	False	NA	NA	False	AATAAA	-18	NA	96085132	96087418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96085873_96086798
Isoform_23444_4	chr11	+	1589	2	FSM	ENSMUSG00000078706.5	ENSMUST00000150490.3	3257	2	-53	1721	-53	1284	multi-exon	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCTGTCCCAGGTGC	8761	False	NA	NA	False	AATAAA	-18	NA	96142416	96153803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96142640_96152437
Isoform_23446_6	chr11	+	1256	2	FSM	ENSMUSG00000078706.5	ENSMUST00000150490.3	3257	2	-467	2468	72	537	multi-exon	FALSE	canonical	3	27	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATCTGTGTGTGTGTGT	8347	False	NA	NA	False	NA	NA	NA	96142002	96153056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96142640_96152437
Isoform_23453_445	chr11	+	2195	5	ISM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-18	493	4	-2	5prime_fragment	FALSE	canonical	3	583	junction_4	77.1508263079534	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96679966	96698973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441
Isoform_23461_115	chr11	+	1162	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	188	junction_5	206.095705923243	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96679961	96698973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96698628
Isoform_23463_25	chr11	+	982	5	NNC	ENSMUSG00000018666.14	novel	912	5	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_4	247.637335634189	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGATTTCTGTCTTTT	NA	False	NA	14	True	AATAAA	-15	NA	96679993	96698974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96698628
Isoform_23469_23	chr11	+	1334	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	289.614916742905	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGATTTCTGTCTTTT	NA	False	NA	14	True	AATAAA	-15	NA	96679966	96698974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441_96697591_96698628
Isoform_23480_181	chr11	+	920	9	FSM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	0	10	0	-10	multi-exon	FALSE	canonical	3	213	junction_8	11.8420595759353	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCAAAGACCTCCTTT	775	False	NA	1	True	AATAAA	-12	NA	96740701	96752019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
Isoform_23482_4	chr11	+	928	9	NIC	ENSMUSG00000018672.16	novel	930	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	75.0273908316156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGACCTCCTTTCTTGAC	769	False	NA	7	True	AATAAA	-18	NA	96740695	96752025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746085_96746160_96747497_96747550_96748378_96748418_96751688
Isoform_23483_5	chr11	+	1369	2	FSM	ENSMUSG00000047040.10	ENSMUST00000054311.6	1342	2	-32	5	-32	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCACGGTCTTATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	96820095	96826469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96820336_96825340
Isoform_23484_19	chr11	+	1358	2	FSM	ENSMUSG00000047040.10	ENSMUST00000062172.6	1242	2	-113	-3	-21	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACGGTCTTATTTATAC	NA	False	NA	NA	False	AATAAA	-13	NA	96820106	96826472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96820336_96825343
Isoform_23485_5	chr11	+	2766	6	FSM	ENSMUSG00000078700.11	ENSMUST00000135825.9	2801	6	31	4	7	-4	multi-exon	TRUE	canonical	1	2	junction_3	5.35163526410386	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCCAAAAAACAAAAAACAA	4818	False	NA	NA	False	NA	NA	NA	96835021	96855882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96835041_96835670_96835920_96843406_96843555_96850379_96851108_96851686_96851823_96854396
Isoform_23487_79	chr11	+	3601	2	FSM	ENSMUSG00000038560.8	ENSMUST00000107622.2	3621	2	28	-8	28	5	multi-exon	FALSE	canonical	3	16	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCTTTGTTTGTCTTC	NA	False	NA	8	True	AATAAA	-18	NA	96909586	96915565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96909854_96912231
Isoform_23490_4	chr11	+	3360	3	FSM	ENSMUSG00000020877.12	ENSMUST00000133054.8	605	3	-4	-2751	-4	-1	multi-exon	FALSE	canonical	3	106	junction_1	14	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGATCTCAAGTCTAT	NA	False	NA	16	True	AATAAA	-22	NA	96920773	96924783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96920882_96921241_96921416_96921705
Isoform_23491_206	chr11	+	1521	8	FSM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	10	-1	-4	1	multi-exon	FALSE	canonical	3	80	junction_5	16.9597362320652	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATCTCAAGTCTATTG	NA	False	NA	18	True	AATAAA	-24	NA	96920773	96924785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_23493_3	chr11	+	1659	7	NNC	ENSMUSG00000020877.12	novel	1552	7	NA	NA	-4	2	intron_retention	FALSE	canonical	0	0	junction_4	45.5792959820818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGAACTGGATCTCAAG	NA	False	NA	11	True	AATAAA	-17	NA	96920773	96924778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923167_96923580_96924056_96924144_96924326_96924491
Isoform_23494_3	chr11	+	3122	5	NIC	ENSMUSG00000020877.12	novel	1552	7	NA	NA	-5	1	intron_retention	FALSE	canonical	3	106	junction_1	10.4880884817015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATCTCAAGTCTATTG	NA	False	NA	18	True	AATAAA	-24	NA	96920758	96924785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_96920882_96921241_96921416_96921705_96924056_96924144_96924326_96924491
Isoform_23495_3	chr11	+	1347	7	NIC	ENSMUSG00000020877.12	novel	1530	8	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	43.8422044255178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGAACTGGATCTCAA	NA	False	NA	10	True	AATAAA	-16	NA	96920765	96924777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_96920882_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_23496_13	chr11	+	1702	7	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	187	1	-9	-1	3prime_fragment	FALSE	canonical	3	80	junction_4	17.8551268703293	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGATCTCAAGTCTAT	NA	False	NA	16	True	AATAAA	-22	NA	96920950	96924783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_23499_449	chr11	+	1686	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	22	0	-13	0	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	895	False	NA	10	True	NA	NA	NA	96932407	96940039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
Isoform_23503_56	chr11	+	1510	4	NIC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	-13	-6	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	229.382262222305	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTGCCTATGTTTATA	895	False	NA	4	True	NA	NA	NA	96932407	96940033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_96932479_96937855_96938021_96938238_96938384_96938904
Isoform_23507_3	chr11	+	3761	22	ISM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	163	1	-29	-1	intron_retention	FALSE	canonical	3	35	junction_2	30.9017167771184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTGACCACTCATTGA	NA	False	NA	21	True	AATAAA	-17	NA	96941616	96959729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490
Isoform_23508_93	chr11	+	3576	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	195	0	3	0	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941648	96959730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
Isoform_23509_51	chr11	+	3620	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	151	0	-41	0	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941604	96959730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
Isoform_23510_3	chr11	+	2213	9	ISM	ENSMUSG00000038534.20	ENSMUST00000168565.2	3535	24	9040	2	6436	-2	3prime_fragment	FALSE	canonical	3	42	junction_3	42.4792228624771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGACCACTCATTG	6393	False	NA	20	True	AATAAA	-16	NA	96950685	96959728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
Isoform_23512_7	chr11	+	1539	5	FSM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	12	-631	12	-2	multi-exon	FALSE	canonical	3	78	junction_1	29.0978951128772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGACCACTCATTG	NA	False	NA	20	True	AATAAA	-16	NA	96957720	96959728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
Isoform_23513_5	chr11	+	1528	3	ISM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	306	-633	306	0	intron_retention	FALSE	canonical	3	133	junction_1	12.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96958014	96959730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_96958176_96958259_96958387_96958490
Isoform_23515_20	chr11	+	1449	4	ISM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	231	-633	231	0	3prime_fragment	FALSE	canonical	3	130	junction_3	12.5521135891752	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96957939	96959730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_96958176_96958259_96958387_96958490_96958614_96958767
Isoform_23519_2450	chr11	+	1477	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	141	813	-51	-813	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	2450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTGTGTTCTGTACA	NA	False	NA	NA	False	AATAAA	-20	NA	97206682	97219933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
Isoform_23520_173	chr11	+	2293	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	141	-3	-51	3	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGCTTAAAATTACTTTA	NA	False	NA	17	True	NA	NA	NA	97206682	97220749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
Isoform_23532_40	chr11	+	1653	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-51	-811	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	1010.03465287088	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTTCTGTACATT	NA	False	NA	NA	False	AATAAA	-22	NA	97206682	97219935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217433_97217758_97218911_97219086_97219307
Isoform_23541_20	chr11	+	2441	10	FSM	ENSMUSG00000038485.7	ENSMUST00000238729.2	7131	10	-216	4906	-216	-4906	multi-exon	FALSE	canonical	3	14	junction_4	9.34258800425685	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTTTAGTATTTACATT	NA	False	NA	NA	False	NA	NA	NA	97253044	97284462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
Isoform_23546_19	chr11	+	2340	9	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-217	-4906	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.78564169540279	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTTTAGTATTTACATT	NA	False	NA	NA	False	NA	NA	NA	97253043	97284462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
Isoform_23554_12	chr11	+	2458	3	ISM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	6	2255	6	1607	5prime_fragment	FALSE	canonical	3	106	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97489342	97511464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_97489494_97505749_97505855_97509262
Isoform_23562_4	chr11	+	3790	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	6	-3184	6	3184	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACCCCGTGCTGATTT	NA	False	NA	NA	False	AATAAA	-32	NA	97489342	97516903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
Isoform_23563_534	chr11	+	728	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	9	0	9	0	multi-exon	FALSE	canonical	3	940	junction_1	75.5	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2461	False	NA	-1	True	AATAAA	-21	NA	97576787	97579447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97577042_97577326_97577447_97579093
Isoform_23569_330	chr11	+	756	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	11	-1	11	1	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	False	NA	23	True	AATAAA	-16	NA	97594235	97604327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
Isoform_23570_5175	chr11	+	732	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	35	-1	0	1	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	5175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	False	NA	23	True	AATAAA	-16	NA	97594259	97604327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
Isoform_23586_1162	chr11	+	3431	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	109	0	2	0	multi-exon	FALSE	canonical	3	479	junction_6	89.534754270184	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	4565	False	NA	10	True	AATAAA	-21	NA	97690499	97729590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
Isoform_23588_21	chr11	+	3499	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	41	0	41	0	multi-exon	FALSE	canonical	3	479	junction_6	89.534754270184	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	4497	False	NA	10	True	AATAAA	-21	NA	97690431	97729590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
Isoform_23595_22	chr11	+	3275	7	NIC	ENSMUSG00000038366.16	novel	758	3	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	237.309221621636	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCTTCTTCCTCTTTGA	NA	False	NA	11	True	AATAAA	-22	NA	97697139	97729591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_97697172_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
Isoform_23596_73	chr11	+	3311	6	ISM	ENSMUSG00000038366.16	ENSMUST00000148280.3	686	7	1563	-2644	253	-1	3prime_fragment	FALSE	canonical	3	479	junction_5	97.3829553874804	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGGCTTCTTCCTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	97697580	97729589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
Isoform_23611_3	chr11	+	1531	2	FSM	ENSMUSG00000050538.9	ENSMUST00000170806.2	1118	2	-26	-387	-7	-379	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAATTGAGATTGTATA	5303	False	NA	NA	False	NA	NA	NA	97732118	97734256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97732403_97733009
Isoform_23614_9158	chr11	+	703	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	33	15	0	-15	multi-exon	FALSE	canonical	3	9068	junction_1	2898.60244945732	9158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGTTTAGCAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	97917782	97921303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
Isoform_23630_10	chr11	+	5697	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107538.2	5143	14	-554	0	-278	0	multi-exon	FALSE	canonical	3	27	junction_13	22.2330315590945	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTTGACAAAAGTTAT	NA	False	NA	-1	True	AATAAA	-17	NA	98093606	98141870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
Isoform_23632_3	chr11	+	8198	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107538.2	5143	14	-563	-2492	-287	1972	multi-exon	FALSE	canonical	3	27	junction_13	22.2330315590945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTTTTGCTGCATTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	98093597	98144362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
Isoform_23633_20	chr11	+	5978	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107539.8	5912	14	-262	196	-262	-196	multi-exon	FALSE	canonical	3	54	junction_13	16.8635316059493	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCTCCGTAACTCTT	NA	False	NA	69	True	AATAAA	-23	NA	98093622	98142194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
Isoform_23638_3	chr11	+	5998	14	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-287	-198	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	25.4502647595533	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTCTCCGTAACTC	NA	False	NA	67	True	AATAAA	-21	NA	98093597	98142192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_98095237_98101189_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
Isoform_23639_5	chr11	+	1710	7	FSM	ENSMUSG00000061718.13	ENSMUST00000078694.13	2001	7	284	7	284	1	multi-exon	FALSE	canonical	1	3	junction_1	2.21108319357027	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTCCTGAGACTCC	NA	False	NA	NA	False	AATAAA	-9	NA	98239513	98248615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98240001_98241394_98241456_98241710_98241734_98242091_98242168_98246152_98246336_98247650_98247774_98247858
Isoform_23641_5	chr11	+	2095	15	NIC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	37.1593370033779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGTGATGGTGCATTCC	938	False	NA	10	True	AATAAA	-13	NA	98249256	98271937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98249335_98262895_98263169_98265829_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
Isoform_23642_16	chr11	+	2002	15	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	-13	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	34.185344156554	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAAAATGCAG	924	False	NA	-8	True	ATTAAA	-8	NA	98249242	98271919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
Isoform_23643_14	chr11	+	2012	15	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	27	-18	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	34.185344156554	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAACATGAAATAAAAA	902	False	NA	-20	True	NA	NA	NA	98249220	98271907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
Isoform_23646_5	chr11	+	2021	15	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	22	-6	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	46.7946556341466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAAAATGCAG	897	False	NA	-8	True	ATTAAA	-8	NA	98249215	98271919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267323_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
Isoform_23647_259	chr11	+	2067	15	FSM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	14	-11	14	-2	multi-exon	TRUE	canonical	3	120	junction_11	11.573412528335	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTGTGATGGTGCATTC	889	False	NA	9	True	AATAAA	-12	NA	98249207	98271936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
Isoform_23649_17	chr11	+	2994	14	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_11	11.8071285257538	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGATGGTGCATTCCT	938	False	NA	11	True	AATAAA	-14	NA	98249256	98271938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98270893_98271283
Isoform_23650_4	chr11	+	2242	15	ISM	ENSMUSG00000062312.6	ENSMUST00000136032.2	4431	26	-25	7947	-2	1558	5prime_fragment	FALSE	canonical	3	26	junction_8	12.9496670826327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGAGTACACAGTTGCT	9035	False	NA	NA	False	NA	NA	NA	98303293	98319956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649
Isoform_23651_14	chr11	+	4590	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	-35	457	-35	182	multi-exon	TRUE	canonical	3	26	junction_8	10.5841234232719	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGTCTGAGAGTGGT	9002	False	NA	NA	False	NA	NA	NA	98303260	98328085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
Isoform_23652_46	chr11	+	4466	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	2	544	2	95	multi-exon	FALSE	canonical	3	26	junction_8	10.5841234232719	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGAGAGTGGGTGTTA	9039	False	NA	54	True	NA	NA	NA	98303297	98327998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
Isoform_23654_21	chr11	+	4550	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	1	461	1	178	multi-exon	FALSE	canonical	3	26	junction_8	10.5841234232719	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCCTATGTCTGAGAG	9038	False	NA	NA	False	NA	NA	NA	98303296	98328081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
Isoform_23656_23	chr11	+	4500	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	-25	537	-25	102	multi-exon	FALSE	canonical	3	26	junction_8	10.5841234232719	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGGGTGTTATATGAAA	9012	False	NA	61	True	NA	NA	NA	98303270	98328005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
Isoform_23659_247	chr11	+	2180	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	217	0	3	0	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCCTGTCTGGCA	NA	False	NA	18	True	AATAAA	-18	NA	98337876	98346199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
Isoform_23660_11	chr11	+	2366	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	29	2	29	-2	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGAGTCCTGTCTGG	NA	False	NA	16	True	AATAAA	-16	NA	98337688	98346197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
Isoform_23663_6	chr11	+	2081	14	NIC	ENSMUSG00000019312.11	novel	2397	15	NA	NA	-3	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	16.0984397788609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATCTGTGAGTCCTGT	NA	False	NA	12	True	AATAAA	-12	NA	98337870	98346193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
Isoform_23664_4	chr11	+	1671	12	FSM	ENSMUSG00000017204.5	ENSMUST00000017348.3	2726	12	0	1055	0	-1055	multi-exon	FALSE	canonical	0	0	junction_2	1.46586504514519	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACTTTGAGTCACTTCA	4001	False	NA	NA	False	NA	NA	NA	98555176	98567479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98555265_98556881_98557101_98557276_98557458_98560444_98560611_98561582_98561680_98562143_98562192_98562556_98562584_98563120_98563142_98563801_98563957_98564431_98564547_98566698_98566773_98566999
Isoform_23668_8217	chr11	+	2136	12	FSM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	12	0	1	0	multi-exon	FALSE	canonical	3	1019	junction_3	95.9435956889203	8217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGCACGGTGTCAG	NA	False	NA	16	True	AATAAA	-14	NA	98573391	98586805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
Isoform_23669_132	chr11	+	2158	12	FSM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	-11	1	-11	-1	multi-exon	FALSE	canonical	3	1019	junction_3	95.9435956889203	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTGTGCACGGTGTCA	NA	False	NA	15	True	AATAAA	-13	NA	98573368	98586804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
Isoform_23679_109	chr11	+	2397	11	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1019	junction_3	100.383066301045	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTGTGCACGGTGTCA	NA	False	NA	15	True	AATAAA	-13	NA	98573391	98586804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
Isoform_23697_6	chr11	+	2227	10	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	28	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	14.2785343509016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	5145	False	NA	NA	False	TATAAA	-20	NA	98631491	98655940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98631514_98632183_98632274_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_23698_7	chr11	+	2391	11	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.6476835346322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCGTGTGCCTCCTCC	5119	False	NA	26	True	NA	NA	NA	98631465	98659829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98631514_98632183_98632274_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_23699_4	chr11	+	2029	10	NIC	ENSMUSG00000058756.14	novel	378	4	NA	NA	14	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.9377946878833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGCGTGTGCCTCCTC	5131	False	NA	25	True	NA	NA	NA	98631477	98659828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98631514_98632183_98632274_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_23700_3	chr11	+	2162	9	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	-6	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.9233392187363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTAGACAGAAAAAAAAAACA	5111	False	NA	NA	False	TATAAA	-11	NA	98631457	98655931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98631514_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_23701_20	chr11	+	2311	9	FSM	ENSMUSG00000058756.14	ENSMUST00000103139.11	2246	9	-62	-3	0	3	multi-exon	FALSE	canonical	3	10	junction_1	12.2519131159179	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	6290	False	NA	NA	False	TATAAA	-20	NA	98632636	98655940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_23702_20	chr11	+	2359	9	FSM	ENSMUSG00000058756.14	ENSMUST00000103139.11	2246	9	-110	-3	-48	3	multi-exon	FALSE	canonical	3	10	junction_1	12.2519131159179	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	6242	False	NA	NA	False	TATAAA	-20	NA	98632588	98655940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_23703_30	chr11	+	2241	9	FSM	ENSMUSG00000058756.14	ENSMUST00000103139.11	2246	9	6	-1	6	1	multi-exon	FALSE	canonical	3	10	junction_1	12.2519131159179	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAACAAAAAACA	6358	False	NA	NA	False	TATAAA	-18	NA	98632704	98655938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_23704_67	chr11	+	2451	10	FSM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	0	1	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	13.6055544213057	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCGTGTGCCTCCTCCAG	6290	False	NA	28	True	NA	NA	NA	98632636	98659831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_23706_14	chr11	+	2486	10	FSM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	-35	1	-35	-1	multi-exon	FALSE	canonical	3	10	junction_1	13.6055544213057	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCGTGTGCCTCCTCCAG	6255	False	NA	28	True	NA	NA	NA	98632601	98659831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_23707_10	chr11	+	2334	10	NIC	ENSMUSG00000058756.14	novel	2452	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	11.7104996677826	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCGTGTGCCTCCTCCAG	6290	False	NA	28	True	NA	NA	NA	98632636	98659831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98659099
Isoform_23708_5	chr11	+	2182	9	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	-22	3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	13.5410256258527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	6615	False	NA	NA	False	TATAAA	-20	NA	98632961	98655940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98633029_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_23709_8	chr11	+	2322	10	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	14.8082392814704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCGTGTGCCTCCTCCAG	6615	False	NA	28	True	NA	NA	NA	98632961	98659831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98633029_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_23710_5	chr11	+	1143	2	ISM	ENSMUSG00000058756.14	ENSMUST00000124072.2	1240	9	9893	3292	9893	0	internal_fragment	FALSE	canonical	3	50	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAACAAAAAAC	7541	False	NA	NA	False	TATAAA	-17	NA	98654304	98655937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_98654614_98655103
Isoform_23712_9	chr11	+	1297	3	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	21657	1	9882	-1	3prime_fragment	FALSE	canonical	3	46	junction_2	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCGTGTGCCTCCTCCAG	7530	False	NA	28	True	NA	NA	NA	98654293	98659831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_98654614_98655103_98655232_98658982
Isoform_23713_11	chr11	+	2393	3	FSM	ENSMUSG00000052915.15	ENSMUST00000107485.8	2091	3	-307	5	-32	-5	multi-exon	FALSE	canonical	3	46	junction_1	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAAGGACTATCTTGG	298	False	NA	NA	False	AATAAA	-23	NA	98686309	98691873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98687431_98689965_98690190_98690825
Isoform_23714_6	chr11	+	2696	3	FSM	ENSMUSG00000052915.15	ENSMUST00000107485.8	2091	3	-610	5	-335	-5	multi-exon	FALSE	canonical	3	46	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAAGGACTATCTTGG	-5	True	NA	NA	False	AATAAA	-23	NA	98686006	98691873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98687431_98689965_98690190_98690825
Isoform_23715_21	chr11	+	3155	9	FSM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	0	1438	0	-13	multi-exon	FALSE	canonical	3	39	junction_3	7.97554857047464	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGATAAAAAAGAAAAAAA	330	False	NA	NA	False	NA	NA	NA	98686341	98697247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
Isoform_23721_6	chr11	+	4627	9	FSM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	-41	7	-41	-7	multi-exon	FALSE	canonical	3	39	junction_3	7.97554857047464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGAACTTTTGCCTC	289	False	NA	24	True	AATAAA	-15	NA	98686300	98698678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
Isoform_23722_678	chr11	+	3696	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	45	0	45	0	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGGCCAGTTATTGT	327	False	NA	14	True	AATAAA	-19	NA	98700678	98724632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
Isoform_23725_9	chr11	+	3808	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	-69	2	-69	-2	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGTGGCCAGTTATT	213	False	NA	12	True	AATAAA	-17	NA	98700564	98724630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
Isoform_23739_4	chr11	+	5861	9	NNC	ENSMUSG00000038013.15	novel	7011	8	NA	NA	6	-1112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.66651347832157	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAACAAAAAG	948	False	NA	NA	False	ATTAAA	-5	NA	98754469	98794754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_98754566_98754597_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
Isoform_23740_3	chr11	+	4174	9	NNC	ENSMUSG00000038013.15	novel	7011	8	NA	NA	1	-2807	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.66651347832157	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAATTGTTGGTCTGTTT	943	False	NA	33	True	NA	NA	NA	98754464	98793059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_98754532_98754560_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
Isoform_23745_998	chr11	+	2532	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	38	2044	-10	-1	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	6	False	NA	7	True	AATATA	-16	NA	98798664	98812718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
Isoform_23746_94	chr11	+	2216	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	16	2382	16	93	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTTCAGTACTTTT	33	False	NA	NA	False	NA	NA	NA	98798642	98812380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
Isoform_23748_37	chr11	+	4580	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	38	-4	-10	0	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCCTCTGCCATTTCT	6	False	NA	NA	False	AATAAA	-22	NA	98798664	98814766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
Isoform_23759_98	chr11	+	2529	12	NIC	ENSMUSG00000017499.16	novel	4802	13	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	177.064586432734	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	6	False	NA	7	True	AATATA	-16	NA	98798664	98812718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802216_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
Isoform_23771_40	chr11	+	2379	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107474.8	2380	9	1	0	1	0	multi-exon	FALSE	canonical	3	15	junction_1	86.2060576467803	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	8807	False	NA	6	True	NA	NA	NA	98818644	98864988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_23772_23	chr11	+	3171	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107474.8	2380	9	-13	-778	-13	-2	multi-exon	FALSE	canonical	3	15	junction_1	86.2060576467803	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTCTTGCCTCTCTGC	8793	False	NA	12	True	AATAAA	-17	NA	98818630	98865766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_23775_15	chr11	+	2559	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	-90	0	-90	0	multi-exon	FALSE	canonical	3	106	junction_2	61.7220331405245	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	NA	False	NA	6	True	NA	NA	NA	98828433	98864988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_23776_99	chr11	+	3257	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	-9	-779	-9	-1	multi-exon	FALSE	canonical	3	106	junction_2	61.7220331405245	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTCTTGCCTCTCTGCC	NA	False	NA	13	True	AATAAA	-18	NA	98828514	98865767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_23781_254	chr11	+	2416	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	42	780	42	0	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	7480	False	NA	6	True	NA	NA	NA	98851279	98864988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_23782_169	chr11	+	2442	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	16	780	16	0	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	7454	False	NA	6	True	NA	NA	NA	98851253	98864988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_23785_53	chr11	+	3201	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	36	1	36	-1	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTCTTGCCTCTCTGCC	7474	False	NA	13	True	AATAAA	-18	NA	98851273	98865767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_23787_44	chr11	+	3224	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	13	1	13	-1	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTCTTGCCTCTCTGCC	7451	False	NA	13	True	AATAAA	-18	NA	98851250	98865767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_23794_24	chr11	+	2087	4	FSM	ENSMUSG00000017493.13	ENSMUST00000017637.13	3831	4	5	1739	5	733	multi-exon	FALSE	canonical	2	10	junction_3	1.69967317119759	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATTGTGTTTGTTTGAT	4234	False	NA	26	True	AAAAAG	-7	NA	98932074	98943479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_98932672_98939051_98939198_98939919_98940055_98942270
Isoform_23798_3094	chr11	+	658	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	102	562	102	1	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	3094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTAGTCTTGAAGTC	4059	False	NA	0	True	AATAAA	-14	NA	100210812	100212360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
Isoform_23799_2005	chr11	+	1216	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	102	4	102	-4	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	2005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGATGTCCAGATT	4059	False	NA	17	True	AATAAA	-13	NA	100210812	100212918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
Isoform_23809_162	chr11	+	583	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	51	-187	51	3	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTAGTCTTGAAGTCCC	4641	False	NA	2	True	AATAAA	-16	NA	100211394	100212362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100211656_100211773_100211876_100212142
Isoform_2381_845	chr10	-	4709	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	10	3	10	-3	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTAGTTCTTGGTGGCT	NA	False	NA	-8	True	AATAAA	-15	NA	62438050	62416032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
Isoform_23810_157	chr11	+	1140	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	51	-744	51	-3	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCTGATGTCCAGATTG	4641	False	NA	18	True	AATAAA	-14	NA	100211394	100212919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100211656_100211773_100211876_100212142
Isoform_23820_121	chr11	+	2573	10	FSM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	19	-8	19	8	multi-exon	FALSE	canonical	3	18	junction_4	6.35959467611297	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGACAGATGTCTGGT	NA	False	NA	21	True	AATAAA	-22	NA	100306541	100315658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
Isoform_23822_3	chr11	+	2289	9	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	4668	1	-59	-1	3prime_fragment	FALSE	canonical	3	18	junction_3	6.35904867098845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTCCAGAAGTGGACAG	NA	False	NA	12	True	AATAAA	-13	NA	100311190	100315649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
Isoform_23825_8	chr11	+	2131	12	FSM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	107	2	4	-2	multi-exon	FALSE	canonical	2	3	junction_1	9.12538915733062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTTGAGTGACACTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	100436539	100462787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100436735_100440628_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
Isoform_23827_8	chr11	+	2260	11	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	3872	2	-68	-2	3prime_fragment	FALSE	canonical	3	16	junction_2	6.19354502688081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTTGAGTGACACTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	100440304	100462787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
Isoform_2383_184	chr10	-	4746	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-20	-4	-20	4	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGGTGGCTTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	62438080	62416025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
Isoform_23831_275	chr11	+	2287	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	70	0	70	0	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	19	True	AATAAA	-15	NA	100465799	100472554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
Isoform_23832_102	chr11	+	2345	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	12	0	12	0	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	19	True	AATAAA	-15	NA	100465741	100472554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
Isoform_23835_73	chr11	+	1981	5	NIC	ENSMUSG00000017837.13	novel	988	6	NA	NA	20	-4	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	123.71413621733	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTCCCGTCCCCTAC	NA	False	NA	13	True	AATAAA	-20	NA	100513721	100518429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_100513835_100515017_100515126_100515768_100515843_100515934_100516011_100516819
Isoform_23837_1273	chr11	+	2066	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	27	4	-17	-4	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTCCCGTCCCCTAC	NA	False	NA	13	True	AATAAA	-20	NA	100513728	100518429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
Isoform_23844_16	chr11	+	3938	19	ISM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	546	2	-143	-1	3prime_fragment	FALSE	canonical	3	9	junction_8	10.9994388184574	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTCTGCTTCCTGGTT	NA	False	NA	12	True	AATAAA	-29	NA	100751027	100775993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
Isoform_23845_54	chr11	+	3659	19	ISM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	821	6	-7	-5	3prime_fragment	FALSE	canonical	3	9	junction_8	10.9994388184574	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTACCAGTCTGCTTCCT	NA	False	NA	8	True	AATAAA	-25	NA	100751302	100775989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
Isoform_23849_6	chr11	+	1952	4	ISM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	21064	7	1701	-6	3prime_fragment	FALSE	canonical	3	39	junction_3	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTACCAGTCTGCTTCC	NA	False	NA	7	True	AATAAA	-24	NA	100771545	100775988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100772012_100772563_100772616_100772887_100772993_100774659
Isoform_23850_9	chr11	+	1896	3	ISM	ENSMUSG00000004043.15	ENSMUST00000107357.4	3605	18	20241	5	1706	-5	3prime_fragment	FALSE	canonical	3	8	junction_1	15.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTACCAGTCTGCTTCCT	NA	False	NA	8	True	AATAAA	-25	NA	100771550	100775989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100772012_100772887_100772993_100774659
Isoform_23851_17	chr11	+	3988	22	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	56.386100151096	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGCCTGTCTCTGA	NA	False	NA	12	True	AATAAA	-17	NA	100900313	100954540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
Isoform_23852_61	chr11	+	3951	21	FSM	ENSMUSG00000019302.17	ENSMUST00000103110.10	2716	21	55	-1290	20	1	multi-exon	FALSE	canonical	3	25	junction_5	41.6171839508634	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGCCTGTCTCTGA	NA	False	NA	12	True	AATAAA	-17	NA	100900332	100954540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
Isoform_23853_9	chr11	+	889	7	ISM	ENSMUSG00000019302.17	ENSMUST00000154896.8	4162	16	25	17326	-10	-3	5prime_fragment	FALSE	canonical	3	165	junction_5	19.5256241897666	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACACTTGAAAGCTTACTC	NA	False	NA	NA	False	ATTAAA	-17	NA	100900302	100918323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092
Isoform_23854_10	chr11	+	2316	17	ISM	ENSMUSG00000019302.17	ENSMUST00000168757.9	3967	22	35	18888	35	-1	5prime_fragment	FALSE	canonical	3	143	junction_12	25.0571222409917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTGGTCGTGATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	100900347	100935651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341
Isoform_23855_8	chr11	+	2356	17	ISM	ENSMUSG00000019302.17	ENSMUST00000168757.9	3967	22	-2	18885	-2	2	5prime_fragment	FALSE	canonical	3	143	junction_12	25.0571222409917	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTCGTGATTTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	100900310	100935654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341
Isoform_23856_89	chr11	+	3972	22	FSM	ENSMUSG00000019302.17	ENSMUST00000044721.13	4008	22	33	3	-2	3	multi-exon	FALSE	canonical	3	32	junction_19	48.1567734584863	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGCCTGTCTCTGAGT	NA	False	NA	14	True	AATAAA	-19	NA	100900310	100954542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
Isoform_23857_316	chr11	+	3955	21	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	127	junction_18	25.9536124653197	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGCCTGTCTCTGAGT	NA	False	NA	14	True	AATAAA	-19	NA	100900309	100954542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
Isoform_23858_8	chr11	+	3857	20	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	45.3592615005813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGCCTGTCTCTGA	NA	False	NA	12	True	AATAAA	-17	NA	100900297	100954540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100945851_100945970_100946259_100946432_100953137
Isoform_23863_78	chr11	+	2439	6	FSM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	101	20	101	-20	multi-exon	FALSE	canonical	3	15	junction_1	1.93907194296653	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCCTATTACATTAAA	NA	False	NA	3	True	AATAAA	-13	NA	100960938	100968478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066
Isoform_23864_3	chr11	+	2353	6	NIC	ENSMUSG00000001751.10	novel	2560	6	NA	NA	101	-20	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	5.95315042645489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCCTATTACATTAAA	NA	False	NA	3	True	AATAAA	-13	NA	100960938	100968478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964758_100964930_100967066
Isoform_23865_4	chr11	+	899	3	ISM	ENSMUSG00000019301.6	ENSMUST00000019445.6	1339	6	729	13	729	-13	3prime_fragment	FALSE	canonical	3	10	junction_1	7	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATCATGTATCATGTG	86	False	NA	NA	False	NA	NA	NA	100969965	100971340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100970109_100970485_100970661_100970759
Isoform_23866_6	chr11	+	788	2	ISM	ENSMUSG00000019301.6	ENSMUST00000019445.6	1339	6	1223	7	1223	-7	3prime_fragment	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTATCATGTGGAGGGG	580	False	NA	NA	False	NA	NA	NA	100970459	100971346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_100970661_100970759
Isoform_23868_212	chr11	+	2052	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	86	0	26	0	multi-exon	FALSE	canonical	3	106	junction_1	26.2908705931015	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3597	False	NA	25	True	ATTAAA	-16	NA	100973476	100977445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
Isoform_23869_11	chr11	+	2650	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	37	0	intron_retention	FALSE	canonical	3	106	junction_1	25.4972424979644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3608	False	NA	25	True	ATTAAA	-16	NA	100973487	100977445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_100973517_100973824_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
Isoform_23872_22	chr11	+	1379	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	48.4418143239908	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGTGGTTTTCTGT	3561	False	NA	24	True	ATTAAA	-15	NA	100973440	100977444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_100973517_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
Isoform_23875_52	chr11	+	2389	9	FSM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	125	junction_1	20.9388992069784	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3568	False	NA	25	True	ATTAAA	-16	NA	100973447	100977445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
Isoform_23877_5	chr11	+	2985	8	NIC	ENSMUSG00000001755.13	novel	2386	9	NA	NA	8	-2	intron_retention	FALSE	canonical	3	146	junction_2	16.9272151355413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTGTGTGGTTTTCTG	3579	False	NA	23	True	ATTAAA	-14	NA	100973458	100977443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
Isoform_23878_183	chr11	+	1798	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	27	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	8250	False	NA	17	True	AATAAA	-21	NA	100978129	100983032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
Isoform_23883_155	chr11	+	1961	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	4	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8250	False	NA	18	True	AATAAA	-22	NA	100978129	100983033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
Isoform_23887_76	chr11	+	1794	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	9	-1	9	1	multi-exon	TRUE	canonical	3	373	junction_8	104.461715475096	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCCCGGTCTCTGAAT	1239	False	NA	17	True	AATAAA	-20	NA	101010772	101017246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
Isoform_23888_1034	chr11	+	1597	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	203	2	203	-2	multi-exon	FALSE	canonical	3	373	junction_8	104.461715475096	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1433	False	NA	14	True	AATAAA	-17	NA	101010966	101017243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
Isoform_23891_27	chr11	+	1708	11	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	203	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	211.726450874708	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	1433	False	NA	16	True	AATAAA	-19	NA	101010966	101017245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013389_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
Isoform_23898_14	chr11	+	1752	11	FSM	ENSMUSG00000045007.10	ENSMUST00000043654.10	1754	11	2	0	2	0	multi-exon	TRUE	canonical	2	5	junction_5	90.3044295702044	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTTTGTTTGTGACT	1653	False	NA	NA	False	AATAAA	-22	NA	101046734	101052613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101046995_101047273_101047387_101047578_101047747_101048277_101048347_101048608_101048689_101049834_101049962_101050882_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
Isoform_23900_4	chr11	+	889	4	FSM	ENSMUSG00000001240.14	ENSMUST00000129680.8	1178	4	287	2	3	-2	multi-exon	FALSE	canonical	2	5	junction_2	6.16441400296898	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGCCTTCCTAGTGGG	NA	False	NA	15	True	AATAAA	-16	NA	101137140	101139074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101137399_101137880_101137971_101138411_101138515_101138636
Isoform_23901_17	chr11	+	1108	6	FSM	ENSMUSG00000078656.12	ENSMUST00000107280.11	876	6	-9	-223	-3	1	multi-exon	FALSE	canonical	3	35	junction_2	474.329252734849	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGCCTGTTACTACTG	NA	False	NA	17	True	ATTAAA	-14	NA	101144551	101150372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101144634_101144856_101145003_101145744_101145823_101146834_101146924_101147703_101147780_101149735
Isoform_23903_14	chr11	+	1220	6	FSM	ENSMUSG00000078656.12	ENSMUST00000100414.12	1220	6	1	-1	0	1	multi-exon	FALSE	canonical	3	11	junction_5	486.921595331322	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGCCTGTTACTACTG	NA	False	NA	17	True	ATTAAA	-14	NA	101144555	101150372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149595
Isoform_23904_929	chr11	+	1061	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	42	3	-4	1	multi-exon	FALSE	canonical	3	1136	junction_3	45.4682306671372	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGCCTGTTACTACTG	NA	False	NA	17	True	ATTAAA	-14	NA	101144574	101150372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
Isoform_23906_13	chr11	+	992	5	FSM	ENSMUSG00000078656.12	ENSMUST00000144306.9	361	5	-1	-630	0	1	multi-exon	FALSE	canonical	3	19	junction_3	527.253733983933	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGCCTGTTACTACTG	NA	False	NA	17	True	ATTAAA	-14	NA	101144554	101150372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101147703_101147780_101149735
Isoform_2391_80	chr10	-	2603	16	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	70.2071854505569	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8148	False	NA	-11	True	ATTAAA	-28	NA	62486955	62451793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
Isoform_23910_31	chr11	+	2338	7	FSM	ENSMUSG00000078653.5	ENSMUST00000103107.5	2335	7	11	-14	11	14	multi-exon	FALSE	canonical	2	14	junction_6	3.09120616516523	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGGTTTAATATTAC	NA	False	NA	23	True	AATAAA	-28	NA	101169932	101179541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101170307_101174217_101174294_101174546_101174719_101175585_101175749_101176490_101176636_101177679_101177777_101178230
Isoform_23913_79	chr11	+	2712	12	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	19	-8	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	514.270726529606	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCAGACCCTGGTGCT	NA	False	NA	26	True	ATTAAA	-27	NA	101207057	101214355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101207315_101207846_101207922_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
Isoform_23916_2865	chr11	+	2643	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	20	1	20	-1	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	2865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207058	101214362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
Isoform_23928_109	chr11	+	2539	10	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_3	427.085471539363	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207058	101214363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
Isoform_2393_251	chr10	-	2492	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	42	1	-3	-1	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTAAGAGTTTTC	8148	False	NA	-12	True	ATTAAA	-27	NA	62486955	62451794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
Isoform_2394_24	chr10	-	2560	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	-33	8	-33	-8	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTCTGTGTTAAG	8073	False	NA	-19	True	ATTAAA	-20	NA	62487030	62451801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
Isoform_23940_340	chr11	+	3196	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	7	20	7	-20	multi-exon	FALSE	canonical	3	47	junction_3	4.27200187265877	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCTGCAAAGCCCATA	NA	False	NA	15	True	AATAAA	-19	NA	101315917	101326479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
Isoform_23944_14	chr11	+	3733	4	NIC	ENSMUSG00000035007.6	novel	3223	5	NA	NA	5	-20	intron_retention	FALSE	canonical	3	54	junction_2	2.35702260395516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCTGCAAAGCCCATA	NA	False	NA	15	True	AATAAA	-19	NA	101315915	101326479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101316437_101320277_101320437_101322173_101323025_101324277
Isoform_23947_6105	chr11	+	487	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	108	19	-32	-19	multi-exon	FALSE	canonical	3	8302	junction_4	1985.8892844265	6105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAAAT	2349	False	NA	43	True	NA	NA	NA	101333231	101336336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
Isoform_2395_7	chr10	-	2653	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	-15	-103	-15	-17	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATTCTTTCATGTGATG	8091	False	NA	92	True	TATAAA	-14	NA	62487012	62451690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
Isoform_23954_187	chr11	+	730	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	-17	19	-9	-19	multi-exon	FALSE	canonical	3	8302	junction_3	2031.83972465022	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAAAT	2372	False	NA	43	True	NA	NA	NA	101333254	101336336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
Isoform_23955_1583	chr11	+	700	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	13	19	13	-19	multi-exon	FALSE	canonical	3	8302	junction_3	2031.83972465022	1583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAAAT	2402	False	NA	43	True	NA	NA	NA	101333284	101336336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
Isoform_23966_53	chr11	+	1112	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	15	235	15	-1	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTGTGATGGTCTTCT	996	False	NA	4	True	NA	NA	NA	101339247	101349289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
Isoform_23968_9	chr11	+	1362	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	4	-4	4	4	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCTCCAGCAACTCTC	985	False	NA	NA	False	NA	NA	NA	101339236	101349528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
Isoform_23969_4	chr11	+	1611	6	FSM	ENSMUSG00000001313.13	ENSMUST00000153185.8	1578	6	-39	6	-39	-6	multi-exon	FALSE	canonical	3	12	junction_1	71.7568115233669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTATGGACTTAGT	7770	False	NA	15	True	AATAAA	-15	NA	101355785	101362673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101355971_101356456_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_2397_11	chr10	-	2928	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	-396	3	-396	-3	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTGTGTTAAGAGTTT	9879	False	NA	-14	True	ATTAAA	-25	NA	62487393	62451796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
Isoform_23970_6	chr11	+	1530	6	FSM	ENSMUSG00000001313.13	ENSMUST00000153185.8	1578	6	46	2	46	-2	multi-exon	FALSE	canonical	3	12	junction_1	71.7568115233669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTATGGACTTAGTTTTG	7855	False	NA	19	True	AATAAA	-19	NA	101355870	101362677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101355971_101356456_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_23971_8	chr11	+	1228	5	NIC	ENSMUSG00000001313.13	novel	1578	6	NA	NA	41	-6	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	68.3245929369506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTATGGACTTAGT	7850	False	NA	15	True	AATAAA	-15	NA	101355865	101362673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101355971_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_23973_10	chr11	+	1292	5	FSM	ENSMUSG00000001313.13	ENSMUST00000134980.2	831	5	282	-743	282	-5	multi-exon	FALSE	canonical	3	18	junction_1	62.3097103186975	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTATGGACTTAGTT	8576	False	NA	16	True	AATAAA	-16	NA	101356591	101362674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_23974_8	chr11	+	1346	5	FSM	ENSMUSG00000001313.13	ENSMUST00000134980.2	831	5	227	-742	227	-6	multi-exon	FALSE	canonical	3	18	junction_1	62.3097103186975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTATGGACTTAGT	8521	False	NA	15	True	AATAAA	-15	NA	101356536	101362673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_23975_3	chr11	+	1548	5	FSM	ENSMUSG00000001313.13	ENSMUST00000134980.2	831	5	26	-743	26	-5	multi-exon	FALSE	canonical	3	18	junction_1	62.3097103186975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTATGGACTTAGTT	8320	False	NA	16	True	AATAAA	-16	NA	101356335	101362674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_23976_112	chr11	+	1369	5	FSM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	20	5	20	-5	multi-exon	FALSE	canonical	3	109	junction_1	23.8051990119806	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTATGGACTTAGTT	NA	False	NA	16	True	AATAAA	-16	NA	101359020	101362674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_23977_13	chr11	+	1409	5	FSM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	-21	6	-21	-6	multi-exon	FALSE	canonical	3	109	junction_1	23.8051990119806	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTATGGACTTAGT	NA	False	NA	15	True	AATAAA	-15	NA	101358979	101362673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_23979_8	chr11	+	4531	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103099.8	4789	24	257	1	172	-1	multi-exon	FALSE	canonical	3	23	junction_1	55.4078195296328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGCTGTTTATTGTTTA	526	False	NA	20	True	AATAAA	-23	NA	101443231	101472776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
Isoform_2398_13	chr10	-	2324	14	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-3	-7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_6	72.4032102331865	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTATTCTGTGTTAAGA	8148	False	NA	-18	True	ATTAAA	-21	NA	62486955	62451800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
Isoform_23980_11	chr11	+	4626	23	NIC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	-38	-5	intron_retention	TRUE	canonical	3	23	junction_1	55.8982251082084	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	316	False	NA	16	True	AATAAA	-19	NA	101443021	101472772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
Isoform_23982_24	chr11	+	4324	25	NIC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_20	55.70358057512	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	989	False	NA	14	True	AATAAA	-17	NA	101443694	101472770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
Isoform_23983_215	chr11	+	4433	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	215	6	2	-6	multi-exon	FALSE	canonical	3	112	junction_17	38.3552196362625	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACCAAGCTGTTTATT	989	False	NA	15	True	AATAAA	-18	NA	101443694	101472771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
Isoform_23989_6	chr11	+	4218	24	NIC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_19	56.2099763091301	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGCTGTTTATTGTTT	989	False	NA	19	True	AATAAA	-22	NA	101443694	101472775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
Isoform_23990_188	chr11	+	4322	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	11	6	2	-6	multi-exon	FALSE	canonical	3	94	junction_16	37.5030852725303	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACCAAGCTGTTTATT	989	False	NA	15	True	AATAAA	-18	NA	101443694	101472771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
Isoform_23993_32	chr11	+	4223	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	0	-1	intron_retention	FALSE	canonical	3	41	junction_21	53.0816766793681	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGCTGTTTATTGTTTA	987	False	NA	20	True	AATAAA	-23	NA	101443692	101472776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
Isoform_23994_8	chr11	+	4266	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	0	-6	intron_retention	FALSE	canonical	3	12	junction_20	58.2924832670746	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACCAAGCTGTTTATT	987	False	NA	15	True	AATAAA	-18	NA	101443692	101472771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
Isoform_24004_15	chr11	+	2302	9	FSM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	1	1	1	-1	multi-exon	FALSE	canonical	3	13	junction_1	4.99843725578305	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAAGGGGCATTCCTGG	3689	False	NA	NA	False	AATAAA	-16	NA	101473068	101482613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101473152_101473450_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
Isoform_24010_35	chr11	+	817	5	NNC	ENSMUSG00000086617.2	novel	472	3	NA	NA	-9	680	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	9.83298021964857	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAATGCCTGTGGGGTT	NA	False	NA	5	True	AAAACA	-25	NA	101501430	101507462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_101501538_101501917_101502004_101506606_101506824_101507017_101507086_101507123
Isoform_24011_1055	chr11	+	1095	7	FSM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	14	15	14	13	multi-exon	FALSE	canonical	3	866	junction_2	120.614284210269	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTCTTGTAAATAGTG	NA	False	NA	14	True	AATAAA	-13	NA	101518781	101526911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
Isoform_24016_54	chr11	+	1304	6	NIC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	13	13	intron_retention	FALSE	canonical	3	866	junction_1	132.095420056866	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTCTTGTAAATAGTG	NA	False	NA	14	True	AATAAA	-13	NA	101518780	101526911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
Isoform_24023_53	chr11	+	1361	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	20	1	20	-1	multi-exon	FALSE	canonical	3	45	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTGATCTGGTAAC	2570	False	NA	NA	False	ATTAAA	-17	NA	101556386	101558657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101556464_101557373
Isoform_24026_10	chr11	+	5904	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	70	-1649	-9	1649	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTGGTGCCTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	101623845	101659833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
Isoform_24028_442	chr11	+	4250	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	71	4	-8	-4	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAATGGTTTATTATGA	NA	False	NA	22	True	NA	NA	NA	101623846	101658180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
Isoform_24029_7	chr11	+	4350	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	-27	2	4	-2	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTTTATTATGACT	NA	False	NA	24	True	NA	NA	NA	101623748	101658182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
Isoform_24047_3	chr11	+	3529	2	ISM	ENSMUSG00000048217.12	ENSMUST00000129799.8	2714	4	-23	-39	-23	39	intron_retention	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGACTTCAGGGCATGG	NA	False	NA	51	True	NA	NA	NA	102036315	102040342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_102036818_102037315
Isoform_24048_55	chr11	+	2082	7	FSM	ENSMUSG00000048217.12	ENSMUST00000055409.6	2028	7	-54	0	-18	0	multi-exon	FALSE	canonical	3	17	junction_2	3.13138237134266	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGTCTCAAAAACCATC	NA	False	NA	12	True	NA	NA	NA	102036320	102040303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102036818_102037315_102037591_102037688_102037903_102038189_102038371_102038635_102038808_102038917_102039101_102039743
Isoform_24050_3	chr11	+	2959	7	FSM	ENSMUSG00000048217.12	ENSMUST00000055409.6	2028	7	-52	-879	-16	879	multi-exon	FALSE	canonical	3	17	junction_2	3.13138237134266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTTTTTTCAAATGA	NA	False	NA	NA	False	NA	NA	NA	102036322	102041182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102036818_102037315_102037591_102037688_102037903_102038189_102038371_102038635_102038808_102038917_102039101_102039743
Isoform_24051_3	chr11	+	1644	5	ISM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	150	-5	-7	5	intron_retention	FALSE	canonical	3	149	junction_4	2.29128784747792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTGTGCTCTCATC	NA	False	NA	10	True	AATAAA	-24	NA	102080644	102084912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910
Isoform_24052_32	chr11	+	1524	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	48	1	-38	-1	multi-exon	TRUE	canonical	3	149	junction_4	4.31740662898458	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTTCTTGTCTGTGCT	NA	False	NA	4	True	AATAAA	-18	NA	102080542	102084906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
Isoform_24053_118	chr11	+	1420	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	152	1	-5	-1	multi-exon	FALSE	canonical	3	149	junction_4	4.31740662898458	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTTCTTGTCTGTGCT	NA	False	NA	4	True	AATAAA	-18	NA	102080646	102084906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
Isoform_24059_1357	chr11	+	2558	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	-17	6	-17	-6	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGCCTCCGTCCCACA	NA	False	NA	9	True	AATAAA	-16	NA	102139690	102156007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
Isoform_24064_61	chr11	+	2727	11	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	-31	-7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	126.309144562062	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCAGCCTCCGTCCCAC	NA	False	NA	8	True	AATAAA	-15	NA	102139676	102156006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_102139919_102141504_102141556_102145289_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
Isoform_24070_33	chr11	+	2043	4	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	7740	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	22.0504472113883	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACGTGTGGACATTGTA	3455	False	NA	NA	False	AATAAA	-16	NA	102167308	102170283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_102167698_102168003_102168118_102168701_102168940_102168981
Isoform_24073_85	chr11	+	1890	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	47	2	27	-2	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175803	102180061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
Isoform_24074_39	chr11	+	1928	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	9	2	1	-2	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175765	102180061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
Isoform_24075_7	chr11	+	2075	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	54	-190	34	190	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGCGTGAGCCCCACCC	NA	False	NA	NA	False	AATAAA	-16	NA	102175810	102180253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
Isoform_24076_52	chr11	+	1851	3	FSM	ENSMUSG00000034757.16	ENSMUST00000100387.11	1876	3	23	2	11	-2	multi-exon	FALSE	canonical	3	43	junction_1	44	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175787	102180061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102175915_102178133_102178698_102178901
Isoform_24077_4	chr11	+	2064	3	FSM	ENSMUSG00000034757.16	ENSMUST00000100387.11	1876	3	1	-189	1	189	multi-exon	FALSE	canonical	3	43	junction_1	44	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACAGCGTGAGCCCCACC	NA	False	NA	NA	False	AATAAA	-15	NA	102175765	102180252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102175915_102178133_102178698_102178901
Isoform_24078_74	chr11	+	2257	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	-10	2	-10	-2	multi-exon	FALSE	canonical	3	94	junction_1	18.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102176011	102180061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102176545_102178133_102178698_102178901
Isoform_24079_12	chr11	+	2467	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	-218	0	27	0	multi-exon	FALSE	canonical	3	94	junction_1	18.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	16	True	AATAAA	-18	NA	102175803	102180063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102176545_102178133_102178698_102178901
Isoform_24080_7	chr11	+	2401	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	38	-190	38	190	multi-exon	FALSE	canonical	3	94	junction_1	18.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGCGTGAGCCCCACCC	NA	False	NA	NA	False	AATAAA	-16	NA	102176059	102180253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102176545_102178133_102178698_102178901
Isoform_24081_12	chr11	+	4092	2	NIC	ENSMUSG00000034757.16	novel	2249	3	NA	NA	1	-2	intron_retention	FALSE	canonical	3	131	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175765	102180061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102178698_102178901
Isoform_24083_21	chr11	+	1698	11	FSM	ENSMUSG00000006575.15	ENSMUST00000107102.8	1837	11	138	1	138	-1	multi-exon	FALSE	canonical	3	49	junction_10	57.4930430573996	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGGGAGACAGAGACA	7547	False	NA	10	True	NA	NA	NA	102284366	102292579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292214
Isoform_24085_166	chr11	+	1923	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	121	2	121	-2	multi-exon	FALSE	canonical	3	171	junction_7	30.0134969638661	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7530	False	NA	12	True	AATAAA	-14	NA	102284349	102293379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_24086_19	chr11	+	2026	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	19	1	19	-1	multi-exon	FALSE	canonical	3	171	junction_7	30.0134969638661	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7428	False	NA	13	True	AATAAA	-15	NA	102284247	102293380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_24087_52	chr11	+	1963	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	82	1	82	-1	multi-exon	FALSE	canonical	3	171	junction_7	30.0134969638661	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7491	False	NA	13	True	AATAAA	-15	NA	102284310	102293380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_24090_7	chr11	+	2044	10	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	108	-1	intron_retention	FALSE	canonical	3	182	junction_1	28.2204723866982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7517	False	NA	13	True	AATAAA	-15	NA	102284336	102293380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_24094_18	chr11	+	1919	11	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	111	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	63.1901891119183	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7520	False	NA	13	True	AATAAA	-15	NA	102284339	102293380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102284609_102288396_102288513_102288925_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_24097_5	chr11	+	2005	11	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	60.3033166583729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGTTTCATCTGTTG	7434	False	NA	10	True	AATAAA	-12	NA	102284253	102293377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_102284609_102288396_102288513_102288922_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_24099_19	chr11	+	1924	11	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	109	-1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	60.3033166583729	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7518	False	NA	13	True	AATAAA	-15	NA	102284337	102293380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_102284609_102288396_102288513_102288922_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_2410_18	chr10	-	4444	25	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	7	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	100.456449588311	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTAGTTCCTTCAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	62628028	62579707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627908
Isoform_24103_5	chr11	+	1753	9	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	-283	-1	intron_retention	FALSE	canonical	3	171	junction_5	29.8872882677569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	3200	False	NA	13	True	AATAAA	-15	NA	102288406	102293380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102288513_102288910_102289060_102289202_102289289_102290020_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_24108_834	chr11	+	2176	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	156	-1	-40	1	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATCTGATTTGTTGCG	4294	False	NA	16	True	AATAAA	-18	NA	102321303	102327634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
Isoform_24109_1398	chr11	+	2145	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	185	1	-11	-1	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTATCTGATTTGTTG	4323	False	NA	14	True	AATAAA	-16	NA	102321332	102327632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
Isoform_24128_22	chr11	+	4561	8	NIC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-47	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.6999904634709	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTAGTTTCATTTTTT	NA	False	NA	4	True	AATAAA	-14	NA	102556366	102573064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102556597_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
Isoform_24129_30	chr11	+	4606	8	FSM	ENSMUSG00000051455.14	ENSMUST00000100378.4	4573	8	-32	-1	-32	1	multi-exon	FALSE	canonical	3	15	junction_4	7.57277616039918	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTAGTTTCATTTTTT	NA	False	NA	4	True	AATAAA	-14	NA	102556381	102573064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
Isoform_2413_21	chr10	-	3907	25	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	100.456449588311	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTAATTACTAATGTCTT	NA	False	NA	-9	True	AATAAA	-25	NA	62628034	62580250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627908
Isoform_24130_5	chr11	+	5304	26	NIC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-25	-1	intron_retention	TRUE	canonical	3	16	junction_1	5.06754378372797	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATGTCTCTCCTCTCTC	NA	False	NA	31	True	ATTAAA	-42	NA	102652239	102671087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
Isoform_24138_279	chr11	+	4658	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	203	0	-36	0	multi-exon	TRUE	canonical	3	928	junction_6	43.300411312535	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102919374	102959738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
Isoform_24144_42	chr11	+	2189	11	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	19	junction_2	40.6811995889993	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGCTGTCTGGGAACC	NA	False	NA	4	True	ATTAAA	-14	NA	102992534	103003024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102992615_102993507_102993923_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24146_128	chr11	+	2055	10	FSM	ENSMUSG00000056938.17	ENSMUST00000092559.13	2083	10	28	0	1	0	multi-exon	FALSE	canonical	3	48	junction_2	33.6455746177417	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992535	103003026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24147_29	chr11	+	2253	11	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	42	junction_2	36.0373417443629	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992521	103003026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102992615_102993507_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24148_13	chr11	+	2068	10	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	19	0	intron_retention	FALSE	canonical	3	44	junction_2	34.5350063944784	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992570	103003025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102992615_102993507_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24149_20	chr11	+	2451	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	17	0	intron_retention	FALSE	canonical	3	68	junction_1	25.5477494116409	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992568	103003026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102992615_102993507_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24155_52	chr11	+	1739	10	NIC	ENSMUSG00000056938.17	novel	807	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	42	junction_1	35.1346615814703	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993928	103003026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24156_8	chr11	+	1635	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	12	junction_3	47.4919401056642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993911	103003026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102993972_102994060_102994196_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24157_70	chr11	+	1625	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	44	junction_1	32.3138902022025	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993907	103003026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24158_14	chr11	+	1486	8	NIC	ENSMUSG00000056938.17	novel	807	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	12	junction_2	49.0289377275694	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993925	103003026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102993972_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24159_7	chr11	+	1816	9	NIC	ENSMUSG00000056938.17	novel	961	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	67	junction_1	25.8163586704245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTGCTGTCTGGGAAC	NA	False	NA	3	True	ATTAAA	-13	NA	102993937	103003023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_24162_3	chr11	+	1193	3	FSM	ENSMUSG00000043372.13	ENSMUST00000124928.2	654	3	0	-539	0	-6	multi-exon	FALSE	canonical	1	1	junction_1	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGTGAGAGTGGCTAC	NA	False	NA	NA	False	ATTAAA	-12	NA	103024164	103030011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103024249_103024857_103024968_103029012
Isoform_24163_19	chr11	+	1928	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	0	-707	0	22	multi-exon	FALSE	canonical	3	13	junction_1	7	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGTTAGTGGTGGCA	NA	False	NA	12	True	AATAAA	-19	NA	103024139	103030724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103024249_103024860_103024968_103029012
Isoform_24165_9	chr11	+	1969	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	-36	-23	-5	23	multi-exon	FALSE	canonical	3	4	junction_1	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTTAGTGGTGGCAG	NA	False	NA	13	True	AATAAA	-20	NA	103024134	103030725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103024284_103024860_103024968_103029012
Isoform_24166_15	chr11	+	1245	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	0	665	0	20	multi-exon	FALSE	canonical	3	4	junction_1	11.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACTGGGGCTCTTCTTG	NA	False	NA	NA	False	ATTAAA	-38	NA	103024170	103030037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103024284_103024860_103024968_103029012
Isoform_24167_8	chr11	+	2544	2	FSM	ENSMUSG00000043372.13	ENSMUST00000130341.2	370	2	-553	-1621	-2	24	multi-exon	FALSE	canonical	3	27	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTAGTGGTGGCAGT	NA	False	NA	14	True	AATAAA	-21	NA	103024137	103030726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103024968_103029012
Isoform_24169_30	chr11	+	3972	27	FSM	ENSMUSG00000055805.16	ENSMUST00000218163.2	3824	27	-153	5	-153	1	multi-exon	FALSE	canonical	3	15	junction_15	7.11320132824136	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTGCGTCGGCTCGG	4895	False	NA	18	True	AATAAA	-11	NA	103061779	103089722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
Isoform_2417_19	chr10	-	3837	25	FSM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	-24	539	1	-5	multi-exon	FALSE	canonical	0	0	junction_11	99.9008883844383	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTAATGTCTTTTATT	NA	False	NA	-4	True	AATAAA	-30	NA	62628034	62580245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
Isoform_24171_5	chr11	+	4108	27	FSM	ENSMUSG00000055805.16	ENSMUST00000218163.2	3824	27	-289	5	-289	1	multi-exon	FALSE	canonical	3	15	junction_15	7.11320132824136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTGCGTCGGCTCGG	4759	False	NA	18	True	AATAAA	-11	NA	103061643	103089722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
Isoform_24172_8	chr11	+	3974	27	NIC	ENSMUSG00000055805.16	novel	3824	27	NA	NA	-158	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	8.099236577363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTGCGTCGGCTCGG	4890	False	NA	18	True	AATAAA	-11	NA	103061774	103089722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
Isoform_24176_3	chr11	+	3842	26	FSM	ENSMUSG00000055805.16	ENSMUST00000042286.12	3806	26	-41	5	-41	1	multi-exon	FALSE	canonical	0	0	junction_6	9.20208671986958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTGCGTCGGCTCGG	5007	False	NA	18	True	AATAAA	-11	NA	103061891	103089722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
Isoform_24177_3	chr11	+	3946	26	NIC	ENSMUSG00000055805.16	novel	3806	26	NA	NA	-146	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	9.98430768756652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGTGCGTCGGCTCGGTG	4902	False	NA	20	True	AATAAA	-13	NA	103061786	103089724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
Isoform_24178_3	chr11	+	863	2	ISM	ENSMUSG00000000125.6	ENSMUST00000000127.6	3076	5	38075	1562	38075	-1562	3prime_fragment	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCGCAACAGAACAGGC	5305	False	NA	NA	False	NA	NA	NA	103703050	103707221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_103703595_103706902
Isoform_24179_173	chr11	+	2211	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	30	1	30	-1	multi-exon	FALSE	canonical	3	72	junction_4	7.43303437365925	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTCATGTTCTCCTGG	NA	False	NA	30	True	AATAAA	-19	NA	103857594	103876162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
Isoform_2418_14	chr10	-	3861	25	FSM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	-49	540	-2	-6	multi-exon	FALSE	canonical	0	0	junction_11	99.9008883844383	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTAATGTCTTTTAT	NA	False	NA	-5	True	AATAAA	-29	NA	62628059	62580246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
Isoform_24193_15	chr11	+	554	4	ISM	ENSMUSG00000061086.13	ENSMUST00000123074.8	677	6	3985	-3	-654	3	3prime_fragment	FALSE	canonical	3	41	junction_3	1.69967317119759	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCCTCCGTTGATTTGT	NA	False	NA	9	True	AATAAA	-23	NA	104475135	104478038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_104475439_104475762_104475841_104476552_104476598_104477910
Isoform_24194_10	chr11	+	5697	16	NNC	ENSMUSG00000020689.5	novel	5784	15	NA	NA	47	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	4.12579958580421	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTGGCCTGAGACT	NA	False	NA	NA	False	ATTAAA	-11	NA	104498872	104561295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_104498991_104514236_104514323_104522999_104523196_104524223_104524477_104527877_104528041_104528648_104528811_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556459_104557905_104559006_104559038
Isoform_24195_8	chr11	+	1637	2	ISM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	66	12098	12	-7360	5prime_fragment	FALSE	canonical	3	278	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105017316	105019122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_105017433_105017601
Isoform_24198_272	chr11	+	2546	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	72	-751	18	751	multi-exon	FALSE	canonical	3	226	junction_6	21.0698243941424	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017322	105031971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
Isoform_2420_19	chr10	-	4375	25	FSM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	-24	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_11	99.9008883844383	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTAGTTCCTTCAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	62628034	62579707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
Isoform_24200_34	chr11	+	2583	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	36	-752	-18	752	multi-exon	TRUE	canonical	3	226	junction_6	21.0698243941424	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGGTGGTGTGGCTT	NA	False	NA	4	True	AATAAA	-14	NA	105017286	105031972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
Isoform_24208_7	chr11	+	2732	8	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	2	752	intron_retention	FALSE	canonical	3	226	junction_5	20.985903918233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGGTGGTGTGGCTT	NA	False	NA	4	True	AATAAA	-14	NA	105017306	105031972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
Isoform_24212_7	chr11	+	2546	8	FSM	ENSMUSG00000020691.14	ENSMUST00000136214.8	2556	8	9	1	9	-1	multi-exon	FALSE	canonical	2	5	junction_1	88.9260183225015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAGAAAAATAAGAA	NA	False	NA	NA	False	NA	NA	NA	105017313	105031219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105018268_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
Isoform_24220_9	chr11	+	2944	20	FSM	ENSMUSG00000020694.18	ENSMUST00000092537.10	2743	20	-183	-18	83	18	multi-exon	FALSE	canonical	3	204	junction_5	62.1637993541137	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTCGTGTGTGCTTGTG	NA	False	NA	11	True	AATAAA	-13	NA	105072435	105167303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
Isoform_24222_8	chr11	+	3351	20	FSM	ENSMUSG00000020694.18	ENSMUST00000092537.10	2743	20	-193	-415	73	1	multi-exon	FALSE	canonical	3	204	junction_5	62.1637993541137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGCAAAGATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	105072425	105167700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
Isoform_24224_177	chr11	+	3616	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	83	0	83	0	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072435	105173003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
Isoform_24230_46	chr11	+	3691	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	7	1	7	0	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072359	105173002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
Isoform_24235_7	chr11	+	3513	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	72	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	88.4704894300919	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCCTCCTGGATTCTCT	NA	False	NA	23	True	AATAAA	-16	NA	105072424	105173000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
Isoform_2424_9	chr10	-	4382	25	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	103.452879437398	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62628047	62579708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627988
Isoform_24241_10	chr11	+	3437	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	89.777533604829	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072425	105173003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
Isoform_24244_67	chr11	+	3519	21	FSM	ENSMUSG00000020694.18	ENSMUST00000015107.13	3212	21	-307	0	83	0	multi-exon	FALSE	canonical	3	73	junction_5	74.0480249567806	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072435	105173002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
Isoform_24252_15	chr11	+	3434	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	96.5630418567662	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072425	105173003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
Isoform_2426_181	chr10	-	3821	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	31	10	1	-10	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTAATTACTAATGTCTT	NA	False	NA	-9	True	AATAAA	-25	NA	62628034	62580250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
Isoform_24264_310	chr11	+	5715	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	33	2	5	-2	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCTTGTGATGAATT	4778	False	NA	13	True	AATAAA	-22	NA	105927730	105950148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
Isoform_2427_139	chr10	-	4364	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	31	-533	1	-1	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTAGTTCCTTCAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	62628034	62579707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
Isoform_24272_81	chr11	+	1337	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	28	18	28	-18	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTGTTGCTGGTATG	902	False	NA	8	True	NA	NA	NA	105956914	105964420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
Isoform_24273_20	chr11	+	2545	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	30	-1192	30	1192	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAATGAA	904	False	NA	NA	False	NA	NA	NA	105956916	105965630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
Isoform_24277_14	chr11	+	4672	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-18	-1204	-18	1204	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGGGTCCTGTGACCA	174	False	NA	14	True	AATAAA	-15	NA	105975420	106047476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
Isoform_2428_44	chr10	-	4437	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	-43	-532	-43	-2	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62628108	62579708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
Isoform_24283_33	chr11	+	3790	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-38	-302	-38	302	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGTTTTGCAGATATGT	154	False	NA	NA	False	NA	NA	NA	105975400	106046574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
Isoform_2429_50	chr10	-	3901	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	-43	4	-43	-4	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTAATGTCTTTTATTG	NA	False	NA	-3	True	AATAAA	-31	NA	62628108	62580244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
Isoform_24295_497	chr11	+	3990	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	22	-1	22	1	multi-exon	FALSE	canonical	2	294	junction_3	62.7187383355908	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107773	106139966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
Isoform_24300_38	chr11	+	4036	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	-24	-1	-24	1	multi-exon	FALSE	canonical	2	294	junction_3	62.7187383355908	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107727	106139966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
Isoform_24332_2572	chr11	+	1313	11	FSM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	1	2	1	-2	multi-exon	FALSE	canonical	3	2261	junction_6	178.766439803449	2572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTACAACTCCAGTTTG	4537	False	NA	13	True	AATAAA	-17	NA	106146980	106153944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
Isoform_24347_18	chr11	+	2918	8	NIC	ENSMUSG00000020712.12	novel	3059	8	NA	NA	-15	9	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2.1189138534559	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCCCGTTATCGT	7176	False	NA	NA	False	AATAAA	-20	NA	106167482	106178968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_106167620_106172728_106172805_106173612_106173880_106174868_106175190_106175381_106175661_106176197_106176468_106177201_106177445_106177643
Isoform_24348_27	chr11	+	2708	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	-11	-1	-11	1	multi-exon	FALSE	canonical	0	0	junction_10	15.3330523078346	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTACTGCTTTTGAATT	5108	False	NA	11	True	AATAAA	-13	NA	106680089	106709680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
Isoform_24351_11	chr11	+	3049	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	-350	-3	-327	3	multi-exon	FALSE	canonical	0	0	junction_10	15.3330523078346	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGCTTTTGAATTTA	4769	False	NA	13	True	AATAAA	-15	NA	106679750	106709682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
Isoform_24353_4	chr11	+	1147	3	ISM	ENSMUSG00000078607.7	ENSMUST00000140447.4	1677	5	2488	-1	-54	1	3prime_fragment	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCACCTGGCTTTGCTT	NA	False	NA	NA	False	AGTAAA	-17	NA	106918994	106921265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_106919095_106919191_106919384_106920410
Isoform_24359_318	chr11	+	1864	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	22	18	-22	-18	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGACCATGCAAGGATC	NA	False	NA	NA	False	NA	NA	NA	107370331	107388981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
Isoform_2436_10	chr10	-	3635	24	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-2	-10	combination_of_known_splicesites	FALSE	canonical	3	44	junction_11	80.1914297567216	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTAATTACTAATGTCTT	NA	False	NA	-9	True	AATAAA	-25	NA	62628059	62580250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
Isoform_24361_2068	chr11	+	1500	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	22	382	-22	58	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	2068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107370331	107388617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
Isoform_24381_25	chr11	+	6284	33	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	39.9053567832691	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438776	107577769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_24382_3	chr11	+	7185	33	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-5	901	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	39.9053567832691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAAAATCTAGGGTATG	NA	False	NA	NA	False	ATTAAA	-26	NA	107438776	107578670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_24383_52	chr11	+	6281	33	FSM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	-17	6883	-5	0	multi-exon	FALSE	canonical	3	95	junction_1	34.694973856994	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438776	107577769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_24384_3	chr11	+	7184	33	FSM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	-16	5979	-4	904	multi-exon	FALSE	canonical	3	95	junction_1	34.694973856994	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATCTAGGGTATGTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	107438777	107578673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_24385_4	chr11	+	7155	32	FSM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	-31	-906	-1	906	multi-exon	FALSE	canonical	3	55	junction_15	38.7019615966116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTAGGGTATGTTTCA	NA	False	NA	NA	False	ATTAAA	-31	NA	107438754	107578675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_24386_24	chr11	+	6226	32	FSM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	-8	0	-4	0	multi-exon	FALSE	canonical	3	55	junction_15	38.7019615966116	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438777	107577769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_24387_35	chr11	+	6223	32	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	32.985507491541	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438777	107577769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_24401_11	chr11	+	817	6	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	80	388431	-5	-609	5prime_fragment	FALSE	canonical	3	43	junction_4	6.34350061086148	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTATTAAACGTTTATT	NA	False	NA	NA	False	ATTAAA	-20	NA	108316097	108363010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842
Isoform_24402_3	chr11	+	3154	6	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	75	386099	1	1723	5prime_fragment	FALSE	canonical	3	43	junction_4	6.34350061086148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGACTTATGGCTTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	108316092	108365342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842
Isoform_24404_18	chr11	+	3382	27	FSM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	71	0	-3	0	multi-exon	TRUE	canonical	3	13	junction_14	12.2793543958426	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTTCTTTTTACATT	NA	False	NA	NA	False	ATTAAA	-18	NA	108316088	108751441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
Isoform_24406_29	chr11	+	4256	11	FSM	ENSMUSG00000000142.16	ENSMUST00000052915.14	4260	11	1	3	1	-3	multi-exon	FALSE	canonical	3	13	junction_1	12.1720992437624	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGCCTCATCTTTG	NA	False	NA	4	True	ATTAAA	-16	NA	108811175	108841606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_108811388_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
Isoform_24409_74	chr11	+	4403	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	35	-3	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	5.20096144957834	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGCCTCATCTTTG	NA	False	NA	4	True	ATTAAA	-16	NA	108811660	108841606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_108812020_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
Isoform_24416_7	chr11	+	4404	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.8015821992609	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108812465	108841609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_108812823_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
Isoform_24419_31	chr11	+	946	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	-32	0	-32	0	multi-exon	TRUE	canonical	3	100	junction_2	132.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGTCCTCTTTTGCA	NA	False	NA	9	True	AATAAA	-18	NA	109253624	109271301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109254083_109256361_109256589_109271040
Isoform_24421_23	chr11	+	1159	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	-32	-213	-32	213	multi-exon	FALSE	canonical	3	100	junction_2	132.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATACATTTAGGTTTATT	NA	False	NA	18	True	AATAAA	-33	NA	109253624	109271514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109254083_109256361_109256589_109271040
Isoform_24424_333	chr11	+	6139	5	NNC	ENSMUSG00000020611.15	novel	6160	4	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	135.787287696603	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGTAGCACGACGTTAT	NA	False	NA	11	True	AATAAA	-13	NA	109253652	109292194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739_109288499_109288522
Isoform_24428_32	chr11	+	5375	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	2	783	2	-783	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGCTGTGATGTGACTT	NA	False	NA	13	True	AATAAA	-24	NA	109253658	109291412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
Isoform_24436_5	chr11	+	960	6	FSM	ENSMUSG00000020610.18	ENSMUST00000125108.2	1846	6	-4	890	2	-890	multi-exon	FALSE	canonical	3	91	junction_1	32.499846153482	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGTGTTTTCTGTAGG	NA	False	NA	10	True	AATAAA	-28	NA	109316803	109320981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749
Isoform_24437_46	chr11	+	1394	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	32	1390	2	-231	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCGTGGGTAGAGTTC	NA	False	NA	12	True	AATAAA	-14	NA	109316803	109327584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_24438_31	chr11	+	1614	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	37	1165	1	-6	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATTCTGTGTGGCCCT	NA	False	NA	13	True	AATAAA	-9	NA	109316808	109327809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_24439_10	chr11	+	1211	5	ISM	ENSMUSG00000020610.18	ENSMUST00000125108.2	1846	6	199	891	-39	-891	3prime_fragment	FALSE	canonical	3	149	junction_3	13.4257215820976	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGTGTTTTCTGTAG	NA	False	NA	9	True	AATAAA	-27	NA	109317006	109320980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749
Isoform_24440_23	chr11	+	1863	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-37	6	-31	-6	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATTCTGTGTGGCCCT	NA	False	NA	13	True	AATAAA	-9	NA	109317014	109327809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_24443_33	chr11	+	1638	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-37	231	-31	-231	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCGTGGGTAGAGTTC	NA	False	NA	12	True	AATAAA	-14	NA	109317014	109327584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_24444_20	chr11	+	1677	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-76	231	-70	-231	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCGTGGGTAGAGTTC	NA	False	NA	12	True	AATAAA	-14	NA	109316975	109327584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_24445_3	chr11	+	3217	12	NIC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-96	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1.89823754707465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAATGCATTGCCATGA	319	False	NA	NA	False	AATAAA	-13	NA	109364103	109464149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_109364248_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109463044
Isoform_24448_444	chr11	+	3355	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	5	-1	5	1	multi-exon	TRUE	canonical	3	1417	junction_9	119.858458191318	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAATCAGTTTTTCTTCC	NA	False	NA	21	True	AATAAA	-26	NA	109541751	109560483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
Isoform_24450_742	chr11	+	3329	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	29	1	29	-1	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGAATCAGTTTTTCTT	NA	False	NA	19	True	AATAAA	-24	NA	109541775	109560481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
Isoform_24474_6	chr11	+	1996	12	FSM	ENSMUSG00000020623.12	ENSMUST00000146084.8	1869	12	-131	4	6	-4	multi-exon	FALSE	canonical	0	0	junction_4	29.7790763528648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTGTGGCATAGTATT	NA	False	NA	10	True	AGTAAA	-20	NA	110289953	110404463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381640_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
Isoform_24475_25	chr11	+	2124	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	0	-56	0	56	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCCTATCTCTTTCT	NA	False	NA	70	True	AATGAA	-27	NA	110289947	110404523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
Isoform_24476_173	chr11	+	2060	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	6	2	6	-2	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGGCATAGTATTAG	NA	False	NA	12	True	AGTAAA	-22	NA	110289953	110404465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
Isoform_24477_5	chr11	+	4599	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	6	-2537	6	2537	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110289953	110407004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
Isoform_24479_52	chr11	+	2191	2	FSM	ENSMUSG00000047904.7	ENSMUST00000146390.3	2143	2	-59	11	-59	-11	multi-exon	FALSE	canonical	2	8	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATTGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	113510108	113516843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_113510449_113514992
Isoform_24482_912	chr11	+	3018	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	371	546	212	1	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	15	True	AATAAA	-23	NA	113540365	113553227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
Isoform_24483_27	chr11	+	3358	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	370	207	211	-207	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTCTTCCGAGTGGA	NA	False	NA	NA	False	AATAAA	-28	NA	113540364	113553566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
Isoform_24498_408	chr11	+	2061	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	1	0	1	0	multi-exon	FALSE	canonical	3	249	junction_1	30.335622624235	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575273	113585473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
Isoform_24499_16	chr11	+	3061	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	-1002	3	-967	-3	multi-exon	TRUE	canonical	3	249	junction_1	30.335622624235	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTTCTTCTTCTTTTT	NA	False	NA	12	True	AATAAA	-13	NA	113574270	113585470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
Isoform_24503_30	chr11	+	1966	4	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	111.645271582216	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTCTTCTTTTTTT	NA	False	NA	14	True	AATAAA	-15	NA	113575262	113585472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_113575538_113578599_113580048_113583220_113583329_113585337
Isoform_24505_84	chr11	+	2160	5	FSM	ENSMUSG00000041623.18	ENSMUST00000042227.15	2196	5	36	0	1	0	multi-exon	FALSE	canonical	3	41	junction_1	114.630929508575	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575273	113585473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_113575637_113578599_113580048_113582554_113582660_113583220_113583329_113585337
Isoform_24508_116	chr11	+	2620	5	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	1	-1	intron_retention	TRUE	canonical	3	43	junction_1	113.778293184597	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTCTTCTTTTTTT	NA	False	NA	14	True	AATAAA	-15	NA	113575273	113585472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_113576098_113578599_113580048_113582554_113582660_113583220_113583329_113585337
Isoform_24510_16	chr11	+	2508	4	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	9	0	intron_retention	FALSE	canonical	3	28	junction_2	114.479498407163	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575281	113585473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_113576098_113578599_113580048_113583220_113583329_113585337
Isoform_24513_2176	chr11	+	317	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	54	0	30	0	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	2176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559403	114563157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
Isoform_24514_45	chr11	+	360	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	11	0	11	0	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559360	114563157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
Isoform_24516_838	chr11	+	314	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	50	0	-11	0	multi-exon	FALSE	canonical	3	5140	junction_1	6068.87239835375	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559423	114563157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
Isoform_24518_330	chr11	+	328	5	FSM	ENSMUSG00000057322.13	ENSMUST00000082092.5	345	5	17	0	17	0	multi-exon	FALSE	canonical	3	1304	junction_1	7543.63564122102	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559468	114563157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_114559512_114559606_114559641_114559731_114559793_114562559_114562683_114563090
Isoform_24528_609	chr11	+	3425	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	60	1	-25	-1	multi-exon	FALSE	canonical	3	173	junction_11	15.0937896237857	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGCAGCTGAGTCACT	NA	False	NA	10	True	AATAAA	-13	NA	114566316	114611802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
Isoform_24529_26	chr11	+	3484	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	1	1	1	-1	multi-exon	TRUE	canonical	3	173	junction_11	15.0937896237857	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGCAGCTGAGTCACT	NA	False	NA	10	True	AATAAA	-13	NA	114566257	114611802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
Isoform_24535_6	chr11	+	1883	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-63	3522	-63	0	5prime_fragment	FALSE	canonical	3	20	junction_1	8.2192186706253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGCTTTGGGCTTGT	865	False	NA	NA	False	AATAAA	-18	NA	114742604	114759921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321
Isoform_24536_10	chr11	+	1833	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-12	3521	-12	0	5prime_fragment	FALSE	canonical	3	20	junction_1	8.2192186706253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	916	False	NA	NA	False	AATAAA	-19	NA	114742655	114759922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321
Isoform_24538_21	chr11	+	3675	5	FSM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-13	5	-13	-5	multi-exon	FALSE	canonical	3	20	junction_1	7.21110255092798	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCCTGTGTGTTTCTA	915	False	NA	NA	False	ATTAAA	-33	NA	114742654	114763438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321_114759472_114761146
Isoform_24540_3	chr11	+	1816	4	NIC	ENSMUSG00000051043.17	novel	2200	4	NA	NA	64	-2	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	15.4344492037203	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTCTTGCTTTGGGCTT	1030	False	NA	NA	False	AATAAA	-16	NA	114742769	114759919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_114742813_114754292_114755373_114757450_114757546_114759321
Isoform_24541_6	chr11	+	3720	5	NIC	ENSMUSG00000051043.17	novel	2200	4	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	13.4164078649987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGTTTCTAAGTGAT	976	False	NA	NA	False	ATTAAA	-39	NA	114742715	114763444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_114742813_114754292_114755373_114757450_114757546_114759321_114759472_114761146
Isoform_24542_14	chr11	+	2005	4	FSM	ENSMUSG00000051043.17	ENSMUST00000021071.14	2200	4	193	2	163	-1	multi-exon	FALSE	canonical	2	8	junction_1	13.5973853695808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTTGCTTTGGGCTTG	1129	False	NA	NA	False	AATAAA	-17	NA	114742868	114759920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_114743100_114754292_114755373_114757450_114757546_114759321
Isoform_24546_7	chr11	+	2210	9	FSM	ENSMUSG00000020732.14	ENSMUST00000021076.6	2210	9	-7	7	-7	-7	multi-exon	TRUE	canonical	1	1	junction_2	1.36358901432946	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATACTCTGACCGGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	115044975	115053055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115045118_115047752_115047864_115048776_115048819_115049330_115049398_115049484_115049538_115050501_115050568_115051124_115051182_115051263_115051341_115051460
Isoform_24547_582	chr11	+	1926	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	0	-1	0	1	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGTGTCCTCCTTTG	NA	False	NA	11	True	NA	NA	NA	115054166	115072008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
Isoform_24553_3	chr11	+	1537	3	FSM	ENSMUSG00000045980.14	ENSMUST00000135536.8	369	3	0	-1168	0	1168	multi-exon	FALSE	canonical	3	30	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115078336	115089397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115078425_115079035_115079149_115088061
Isoform_24554_40	chr11	+	3279	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	33	1252	9	7	multi-exon	FALSE	canonical	3	30	junction_1	6.92463842261461	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCTTGCTTAAGGACAA	NA	False	NA	NA	False	ATTAAA	-20	NA	115078345	115136597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
Isoform_24555_10	chr11	+	4547	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	19	-2	-5	2	multi-exon	FALSE	canonical	3	30	junction_1	6.92463842261461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTCCTCTGTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	115078331	115137851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
Isoform_24556_253	chr11	+	3732	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	-32	0	-32	0	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAAGTGACCCTGGGTCT	NA	False	NA	12	True	AATAAA	-22	NA	115272709	115286958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
Isoform_24557_313	chr11	+	3700	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	-1	1	-1	-1	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAAGTGACCCTGGGTC	NA	False	NA	11	True	AATAAA	-21	NA	115272740	115286957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
Isoform_24559_28	chr11	+	3091	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	-58	667	-58	-667	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGGCCCTCATGTTGCG	NA	False	NA	NA	False	NA	NA	NA	115272683	115286291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
Isoform_24565_107	chr11	+	745	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	2	2	2	-2	multi-exon	FALSE	canonical	3	165	junction_1	353.082766501	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTTTCCAGTGAGAG	NA	False	NA	14	True	AATAAA	-14	NA	115294584	115301743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
Isoform_24569_807	chr11	+	834	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	7	1755	2	0	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294584	115301745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
Isoform_24575_64	chr11	+	774	5	FSM	ENSMUSG00000018858.16	ENSMUST00000106539.10	2522	5	5	1743	2	0	multi-exon	FALSE	canonical	3	79	junction_2	428.298377302553	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294584	115301745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115294787_115297376_115297414_115300885_115300969_115301057_115301228_115301463
Isoform_24578_14	chr11	+	2672	5	FSM	ENSMUSG00000016940.19	ENSMUST00000106533.8	2649	5	-23	0	-1	0	multi-exon	FALSE	canonical	3	121	junction_1	5.97390157267426	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	3735	False	NA	28	True	NA	NA	NA	115310952	115322100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105
Isoform_24579_66	chr11	+	1791	6	FSM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	-27	0	-27	0	multi-exon	FALSE	canonical	3	121	junction_1	5.67097875150313	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	3709	False	NA	28	True	NA	NA	NA	115310926	115322100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115321138
Isoform_24580_79	chr11	+	1740	6	FSM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	23	1	1	-1	multi-exon	FALSE	canonical	3	121	junction_1	5.67097875150313	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGTCTCTCCTTCA	3759	False	NA	27	True	NA	NA	NA	115310976	115322099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115321138
Isoform_24582_3	chr11	+	3528	6	FSM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	25	-1789	3	1789	multi-exon	FALSE	canonical	3	121	junction_1	5.67097875150313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTTGGACCGTGTGT	3761	False	NA	NA	False	AATAAA	-15	NA	115310978	115323889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115321138
Isoform_24584_3	chr11	+	2019	2	FSM	ENSMUSG00000045775.16	ENSMUST00000106532.4	2062	2	1	42	1	-42	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATTTTTTTGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	115353300	115365182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115353634_115363496
Isoform_24585_9	chr11	+	1438	3	FSM	ENSMUSG00000057219.12	ENSMUST00000136985.8	1009	3	-31	-398	0	398	multi-exon	FALSE	canonical	1	1	junction_2	10	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTTGTTTTTCCTCAT	NA	False	NA	NA	False	NA	NA	NA	115366492	115375001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115366854_115366947_115367092_115374068
Isoform_24586_5	chr11	+	1367	3	FSM	ENSMUSG00000057219.12	ENSMUST00000126533.2	610	3	-83	-674	-8	674	multi-exon	FALSE	canonical	3	4	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	115366484	115376786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115366854_115366947_115367092_115375932
Isoform_24587_70	chr11	+	2225	3	FSM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	34	1	3	-1	multi-exon	FALSE	canonical	3	16	junction_2	2.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTGTGCTAGTCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	115366526	115381292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115366854_115366947_115367092_115379538
Isoform_24590_1796	chr11	+	2094	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	50	86	-41	-7	multi-exon	FALSE	canonical	3	862	junction_16	81.0315439264927	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGACCAATTGTTAA	NA	False	NA	5	True	AATAAA	-11	NA	115455309	115474725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
Isoform_24591_707	chr11	+	2116	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	28	86	28	-7	multi-exon	TRUE	canonical	3	862	junction_16	81.0315439264927	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGACCAATTGTTAA	NA	False	NA	5	True	AATAAA	-11	NA	115455287	115474725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
Isoform_24595_157	chr11	+	2072	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-43	-7	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_16	299.37137842857	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGACCAATTGTTAA	NA	False	NA	5	True	AATAAA	-11	NA	115455307	115474725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
Isoform_24596_134	chr11	+	2763	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	-7	intron_retention	FALSE	canonical	3	862	junction_15	82.7709559076643	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGACCAATTGTTAA	NA	False	NA	5	True	AATAAA	-11	NA	115455309	115474725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
Isoform_24598_34	chr11	+	2007	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	-10	combination_of_known_junctions	FALSE	canonical	3	10	junction_11	247.898824098904	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATATAAGACCAATTGT	NA	False	NA	2	True	AATAAA	-8	NA	115455309	115474722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
Isoform_24617_137	chr11	+	1531	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	3	428	3	-428	multi-exon	FALSE	canonical	3	642	junction_4	47.0451910401053	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGGTTAAGAGTACT	NA	False	NA	9	True	AATAAA	-23	NA	115494753	115498434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
Isoform_24619_348	chr11	+	1294	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	0	668	0	367	multi-exon	TRUE	canonical	3	642	junction_4	47.0451910401053	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCCATTCTGTGAGTCT	NA	False	NA	12	True	NA	NA	NA	115494750	115498194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
Isoform_24633_6	chr11	+	5247	32	FSM	ENSMUSG00000020747.19	ENSMUST00000093912.11	5329	32	75	7	54	-7	multi-exon	FALSE	canonical	3	50	junction_13	18.7440729445739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATGCATTTCTCTC	NA	False	NA	NA	False	AATAAA	-9	NA	115656333	115690185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
Isoform_24634_75	chr11	+	4978	32	FSM	ENSMUSG00000020747.19	ENSMUST00000093912.11	5329	32	11	340	1	-7	multi-exon	FALSE	canonical	3	50	junction_13	18.7440729445739	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATCCTGTGGTGGAT	NA	False	NA	8	True	ATTAAA	-16	NA	115656269	115689852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
Isoform_24635_57	chr11	+	4903	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	20.1870029585754	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656277	115689851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
Isoform_24637_8	chr11	+	4860	31	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-1	-7	combination_of_known_splicesites	TRUE	canonical	1	2	junction_1	25.7846853771769	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATCCTGTGGTGGAT	NA	False	NA	8	True	ATTAAA	-16	NA	115656257	115689852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115656380_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
Isoform_2464_3	chr10	-	6712	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	140	357	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	59.2754282050234	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGAACATCTTGGTTAG	NA	False	NA	-1	True	AATAAA	-22	NA	62728625	62648043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
Isoform_24647_14	chr11	+	2441	10	ISM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	0	5	0	0	intron_retention	FALSE	canonical	3	156	junction_1	27.0203398467173	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5932	False	NA	NA	False	ATTAAA	-16	NA	115705549	115713915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824
Isoform_24649_8	chr11	+	1923	11	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	65.491678860753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5963	False	NA	NA	False	ATTAAA	-16	NA	115705580	115713915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712922_115713408
Isoform_24650_596	chr11	+	1947	11	FSM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	27	5	5	0	multi-exon	FALSE	canonical	3	156	junction_1	26.8730348118704	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5959	False	NA	NA	False	ATTAAA	-16	NA	115705576	115713915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
Isoform_24654_28	chr11	+	2040	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	156	junction_1	27.0203398467173	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5961	False	NA	NA	False	ATTAAA	-16	NA	115705578	115713915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115705646_115705740_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
Isoform_24655_71	chr11	+	2048	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	180	junction_1	22.7063922038174	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5953	False	NA	NA	False	ATTAAA	-16	NA	115705570	115713915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
Isoform_2466_5	chr10	-	6767	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	87	364	combination_of_known_junctions	FALSE	canonical	3	63	junction_12	54.9749311555327	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTTGGTTAGGTGTTGG	2890	False	NA	6	True	AATAAA	-29	NA	62723204	62648036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62722950
Isoform_24660_10	chr11	+	2149	9	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	180	junction_8	21.3819433167334	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5947	False	NA	NA	False	ATTAAA	-16	NA	115705564	115713915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
Isoform_24661_107	chr11	+	3757	27	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	16	-24	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	202.96016457021	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6825	False	NA	14	True	AGTAAA	-16	NA	115714899	115746580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
Isoform_24667_24	chr11	+	3595	26	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	1	-24	combination_of_known_junctions	FALSE	canonical	3	18	junction_22	175.249006844547	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6810	False	NA	14	True	AGTAAA	-16	NA	115714884	115746580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745557_115745686_115745888_115745932_115746017_115746080_115746291
Isoform_24669_1347	chr11	+	3515	26	FSM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	10	26	1	-24	multi-exon	FALSE	canonical	3	630	junction_7	88.2626444199357	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6810	False	NA	14	True	AGTAAA	-16	NA	115714884	115746580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
Isoform_24670_22	chr11	+	3582	26	FSM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	-57	26	-57	-24	multi-exon	TRUE	canonical	3	630	junction_7	88.2626444199357	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6743	False	NA	14	True	AGTAAA	-16	NA	115714817	115746580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
Isoform_24672_180	chr11	+	3515	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-24	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_23	160.438568929045	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6813	False	NA	14	True	AGTAAA	-16	NA	115714887	115746580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
Isoform_24674_81	chr11	+	3452	25	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	16	-24	combination_of_known_junctions	FALSE	canonical	3	54	junction_22	172.677761668954	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6825	False	NA	14	True	AGTAAA	-16	NA	115714899	115746580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
Isoform_24676_58	chr11	+	3467	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-24	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_22	177.134713134445	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6813	False	NA	14	True	AGTAAA	-16	NA	115714887	115746580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746291
Isoform_2468_5	chr10	-	14329	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	161	-3	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGGTAGTCTATTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	62728604	62640351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
Isoform_24711_4	chr11	+	1717	11	ISM	ENSMUSG00000034427.18	ENSMUST00000040703.12	2825	21	3206	-1	-2805	0	3prime_fragment	TRUE	canonical	1	8	junction_3	2.35796522451032	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCACTCCTCTTG	7645	False	NA	NA	False	AATAAA	-20	NA	115774456	115778272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887
Isoform_24712_4	chr11	+	3259	26	ISM	ENSMUSG00000034427.18	ENSMUST00000222123.2	5154	43	6120	-9	-2782	-2	3prime_fragment	FALSE	canonical	1	5	junction_22	3.4213447648549	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATGTGTCTCCACCGG	7668	False	NA	NA	False	AGTAAA	-23	NA	115774479	115783427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887_115778031_115778390_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780763_115780847_115780964_115781062_115781158_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
Isoform_24715_179	chr11	+	3279	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	371	4	16	-4	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTTTGGTTTTGTG	415	False	NA	3	True	NA	NA	NA	115824478	115857547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_24717_12	chr11	+	3355	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	295	4	4	-4	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTTTGGTTTTGTG	339	False	NA	3	True	NA	NA	NA	115824402	115857547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_24718_357	chr11	+	1205	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	373	2076	18	-886	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCATGTCAGGTGGAC	417	False	NA	16	True	ATTAAA	-17	NA	115824480	115855475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_2472_5	chr10	-	6580	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	136	275	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAACTGTGATTACATT	NA	False	NA	-83	True	ATTAAA	-18	NA	62728629	62648125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
Isoform_24720_29	chr11	+	1250	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	338	2066	-17	-876	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTGGACTGGCCTCTCC	382	False	NA	26	True	ATTAAA	-27	NA	115824445	115855485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_24722_7	chr11	+	3169	10	NIC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	100.552915864677	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTTTGGTTTTGTGGA	417	False	NA	5	True	NA	NA	NA	115824480	115857549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115824608_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_24724_4	chr11	+	3887	26	NIC	ENSMUSG00000020758.16	novel	6208	40	NA	NA	-1458	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	5.35163526410386	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTCTGTCCGTTCTTC	1783	False	NA	NA	False	AATAAA	-18	NA	115879305	115899237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115879390_115879482_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
Isoform_24725_3	chr11	+	3966	26	NIC	ENSMUSG00000020758.16	novel	5584	38	NA	NA	-1536	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	5.35163526410386	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTCTGTCCGTTCTTCA	1705	False	NA	NA	False	AATAAA	-19	NA	115879227	115899238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115879390_115879482_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
Isoform_24728_4	chr11	+	807	3	FSM	ENSMUSG00000020770.14	ENSMUST00000176788.2	471	3	19	-355	19	355	multi-exon	FALSE	canonical	2	5	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTAGTTTTTTATTAAT	8842	False	NA	NA	False	ATTAAA	-18	NA	115921167	115932231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115921318_115929365_115929610_115931818
Isoform_24729_3	chr11	+	3923	17	NIC	ENSMUSG00000020770.14	novel	3692	16	NA	NA	55	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_2	38.2736854771003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8878	False	NA	19	True	AATAAA	-13	NA	115921203	115952040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115921318_115929365_115929610_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
Isoform_24730_51	chr11	+	3638	16	FSM	ENSMUSG00000020770.14	ENSMUST00000106452.2	3696	16	58	0	57	0	multi-exon	FALSE	canonical	3	42	junction_8	23.4630679058719	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8880	False	NA	19	True	AATAAA	-13	NA	115921205	115952040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
Isoform_24731_21	chr11	+	3692	16	FSM	ENSMUSG00000020770.14	ENSMUST00000106452.2	3696	16	4	0	3	0	multi-exon	FALSE	canonical	3	42	junction_8	23.4630679058719	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8826	False	NA	19	True	AATAAA	-13	NA	115921151	115952040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
Isoform_24733_87	chr11	+	3715	16	FSM	ENSMUSG00000020770.14	ENSMUST00000021116.12	3735	16	20	0	19	0	multi-exon	FALSE	canonical	3	78	junction_13	17.1308688240459	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8842	False	NA	19	True	AATAAA	-13	NA	115921167	115952040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
Isoform_24735_6	chr11	+	3533	15	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	29.0073882214268	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8842	False	NA	19	True	AATAAA	-13	NA	115921167	115952040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949814_115950073_115950648
Isoform_24737_119	chr11	+	886	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	15	1	15	-1	multi-exon	FALSE	canonical	3	95	junction_3	16.0277537068951	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGTGTGTGCTGATGCG	9082	False	NA	6	True	AATAAA	-13	NA	116089695	116106143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
Isoform_24741_2459	chr11	+	1472	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	6	4	6	-4	multi-exon	FALSE	canonical	3	1535	junction_2	51	2459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTTTGTGTTTTTGTTT	NA	False	NA	32	True	TTTAAA	-25	NA	116324925	116329899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116325255_116325384_116325448_116328819
Isoform_24745_68	chr11	+	1526	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	-46	2	-46	-2	multi-exon	TRUE	canonical	3	1535	junction_2	51	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTGTTTTTGTTTTT	NA	False	NA	34	True	TTTAAA	-27	NA	116324873	116329901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116325255_116325384_116325448_116328819
Isoform_24752_3	chr11	+	1731	6	FSM	ENSMUSG00000061878.17	ENSMUST00000063446.13	2527	6	792	4	-3	0	multi-exon	FALSE	canonical	0	0	junction_4	1.49666295470958	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGATCCTATCCTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	116424090	116427496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116424195_116424795_116425000_116425674_116425828_116425905_116426001_116426077_116426194_116426437
Isoform_24754_4	chr11	+	2224	4	FSM	ENSMUSG00000065094.3_ENSMUSG00000020812.19	ENSMUST00000144049.8	966	4	-47	-1211	1	0	multi-exon	FALSE	canonical	3	135	junction_1	19.4422220952236	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562486	116566624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763
Isoform_24755_46	chr11	+	1987	5	FSM	ENSMUSG00000020812.19	ENSMUST00000106378.8	1988	5	0	1	0	0	multi-exon	FALSE	canonical	3	135	junction_1	18.9340962287615	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTAGCATTGTGGGTA	NA	False	NA	2	True	AATAAA	-15	NA	116562494	116566623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125
Isoform_24756_17	chr11	+	874	6	FSM	ENSMUSG00000020812.19	ENSMUST00000239281.2	857	6	-19	2	0	0	multi-exon	FALSE	canonical	3	20	junction_5	61.1901952930369	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTAGCATTGTGGGTA	NA	False	NA	2	True	AATAAA	-15	NA	116562494	116566623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566314
Isoform_24757_89	chr11	+	855	6	FSM	ENSMUSG00000020812.19	ENSMUST00000139934.8	865	6	9	1	0	0	multi-exon	FALSE	canonical	3	112	junction_5	27.7632851082144	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTAGCATTGTGGGTA	NA	False	NA	2	True	AATAAA	-15	NA	116562494	116566623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
Isoform_24762_4	chr11	+	2702	3	ISM	ENSMUSG00000020812.19	ENSMUST00000239363.2	1631	4	65	-4	0	0	intron_retention	FALSE	canonical	3	180	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTAGCATTGTGGGTA	NA	False	NA	2	True	AATAAA	-15	NA	116562494	116566623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_116563565_116564763_116564898_116565125
Isoform_24763_9	chr11	+	597	2	FSM	ENSMUSG00000090266.11	ENSMUST00000128784.2	585	2	-19	7	-13	-7	multi-exon	FALSE	canonical	3	40	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTGAATCAAAGTCT	8932	False	NA	17	True	AATAAA	-22	NA	116734367	116736952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116734601_116736588
Isoform_24764_4	chr11	+	1174	6	NIC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	44.7812460746684	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGACTACTCCCAATCATT	8950	False	NA	12	True	ATTAAA	-14	NA	116734385	116740563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739726_116739965_116740041_116740127_116740215
Isoform_24765_3	chr11	+	1156	5	NIC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	-3	5	intron_retention	FALSE	canonical	3	38	junction_2	48.2668364407696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGTATGAAGATGATC	8942	False	NA	22	True	CATAAA	-22	NA	116734377	116740460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739726_116740127_116740215
Isoform_24767_12	chr11	+	996	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	270	10	-7	-10	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCTTAGACTACTCCC	8938	False	NA	5	True	ATTAAA	-7	NA	116734373	116740556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
Isoform_24769_33	chr11	+	866	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	300	110	-7	1	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCAATGGGTATGAAGAT	8968	False	NA	18	True	CATAAA	-18	NA	116734403	116740456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
Isoform_24771_3	chr11	+	956	4	FSM	ENSMUSG00000090266.11	ENSMUST00000176799.8	847	4	-110	1	2	-1	multi-exon	FALSE	canonical	3	104	junction_1	14.8996644257513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTCAATGGGTATGAAG	8953	False	NA	16	True	CATAAA	-16	NA	116734388	116740454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116734601_116739079_116739185_116739726_116740127_116740215
Isoform_24772_3	chr11	+	754	5	NNC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	45.5706868502111	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACTCAATGGGTATGAA	8973	False	NA	15	True	CATAAA	-15	NA	116734408	116740453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_116734601_116739079_116739185_116739830_116739965_116740041_116740127_116740215
Isoform_24773_3	chr11	+	2471	14	NIC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.8406941640727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744305	116765536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_116744584_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_24774_119	chr11	+	2338	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.80424857096892	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGTATTTACTGGG	NA	False	NA	4	True	AATAAA	-15	NA	116744585	116765537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_24776_3	chr11	+	2967	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	4	-111	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.80424857096892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGTCGATGTACCT	NA	False	NA	NA	False	NA	NA	NA	116744591	116766172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_24777_3	chr11	+	3002	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	-4	-26	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.80424857096892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACATTAAGATACAC	NA	False	NA	NA	False	NA	NA	NA	116744641	116766257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_24778_3	chr11	+	1272	2	FSM	ENSMUSG00000020818.17	ENSMUST00000151944.3	419	2	-64	-789	3	789	multi-exon	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAACAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116744590	116746331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116745000_116745468
Isoform_24779_73	chr11	+	2433	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-59	924	-1	-1	multi-exon	FALSE	canonical	3	74	junction_12	6.07076326887045	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGTATTTACTGGG	NA	False	NA	4	True	AATAAA	-15	NA	116744586	116765537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_2478_8	chr10	-	4410	4	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	121	921	combination_of_known_junctions	FALSE	canonical	3	182	junction_3	31.4572019664107	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTCACTTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	62728644	62673954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62676158_62700586_62700641_62713930_62715913_62728473
Isoform_24780_4	chr11	+	2967	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-593	924	-68	-1	multi-exon	TRUE	canonical	3	74	junction_12	6.07076326887045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGTATTTACTGGG	NA	False	NA	4	True	AATAAA	-15	NA	116744052	116765537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_24782_3	chr11	+	1843	8	ISM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	7075	924	1754	-1	3prime_fragment	FALSE	canonical	3	74	junction_7	7.22523920937245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGTATTTACTGGG	7	True	NA	4	True	AATAAA	-15	NA	116751720	116765537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_24784_16	chr11	+	4254	17	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	6.60462669270565	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAATTGGTGGGATTT	1798	False	NA	NA	False	AATAAA	-24	NA	116809678	116877766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
Isoform_24786_6	chr11	+	2307	7	ISM	ENSMUSG00000043857.17	ENSMUST00000103027.10	4258	18	55232	13	1022	-5	3prime_fragment	FALSE	canonical	1	4	junction_1	12.0369800568452	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGAAGAAATTGGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	116864920	116877761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_116865024_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
Isoform_24788_366	chr11	+	595	2	FSM	ENSMUSG00000086859.5	ENSMUST00000149822.3	600	2	5	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	880	False	NA	20	True	AATAAA	-16	NA	116967613	116969781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116968029_116969601
Isoform_24793_297	chr11	+	4737	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-87	4	-17	-1	multi-exon	TRUE	canonical	3	319	junction_5	24.9420662068455	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGTGTCCTTTTCTTC	NA	False	NA	4	True	AATAAA	-14	NA	117005976	117050090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
Isoform_24794_474	chr11	+	4668	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-18	4	-18	-1	multi-exon	FALSE	canonical	3	319	junction_5	24.9420662068455	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGTGTCCTTTTCTTC	NA	False	NA	4	True	AATAAA	-14	NA	117006045	117050090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
Isoform_24801_34	chr11	+	2795	17	FSM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	70	1	4	-1	multi-exon	FALSE	canonical	3	28	junction_16	82.8488599423673	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGTGTCCTTTTCTTC	NA	False	NA	4	True	AATAAA	-14	NA	117006067	117050090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
Isoform_24802_32	chr11	+	2856	17	FSM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	9	1	9	-1	multi-exon	FALSE	canonical	3	28	junction_16	82.8488599423673	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGTGTCCTTTTCTTC	NA	False	NA	4	True	AATAAA	-14	NA	117006006	117050090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
Isoform_24822_115	chr11	+	3597	12	FSM	ENSMUSG00000059248.14	ENSMUST00000093907.11	3616	12	4	15	4	2	multi-exon	FALSE	canonical	3	27	junction_1	260.952736292441	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	3702	False	NA	88	True	AATAAA	-13	NA	117090490	117253136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_24827_152	chr11	+	3590	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	186	8	186	-3	multi-exon	FALSE	canonical	3	88	junction_1	218.744622791053	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	882	False	NA	83	True	AATAAA	-8	NA	117157257	117253131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_24829_71	chr11	+	3817	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	-33	0	-33	0	multi-exon	FALSE	canonical	3	88	junction_1	218.744622791053	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	663	False	NA	91	True	AATAAA	-16	NA	117157038	117253139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_24837_185	chr11	+	2897	10	NIC	ENSMUSG00000059248.14	novel	647	4	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	178.114819397177	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCTGGAGTTCT	NA	False	NA	89	True	AATAAA	-14	NA	117198993	117253137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_117199098_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_24841_135	chr11	+	2940	10	FSM	ENSMUSG00000059248.14	ENSMUST00000100193.8	2924	10	-16	0	-16	0	multi-exon	FALSE	canonical	3	18	junction_1	196.831569283656	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTTTTTTTCTGGAGT	NA	False	NA	86	True	AATAAA	-11	NA	117222529	117253134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117222680_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_24843_1721	chr11	+	2844	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	75	13	-8	-2	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	1721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCTGGAGTTCT	NA	False	NA	89	True	AATAAA	-14	NA	117223245	117253137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_24844_85	chr11	+	2917	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	-4	19	-4	-3	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	NA	False	NA	83	True	AATAAA	-8	NA	117223166	117253131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_24861_18	chr11	+	626	2	FSM	ENSMUSG00000054418.7	ENSMUST00000155384.2	1784	2	98	1060	98	-1060	multi-exon	FALSE	canonical	3	27	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGGTCTCAGAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	117502170	117503623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117502261_117503087
Isoform_24863_31	chr11	+	4186	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	6	39266	6	-25128	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTTTCTTTAATTG	NA	False	NA	NA	False	GATAAA	-16	NA	117545644	117614999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
Isoform_24865_10	chr11	+	4257	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	-66	39267	-66	-25129	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTTTTCTTTAATT	NA	False	NA	NA	False	GATAAA	-15	NA	117545572	117614998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
Isoform_24866_3	chr11	+	4386	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	2	39070	2	-24932	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTATGTTTGGATTCTG	NA	False	NA	NA	False	NA	NA	NA	117545640	117615195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
Isoform_24870_4	chr11	+	8806	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGATGTAATTGCTGT	NA	False	NA	5	True	AATAAA	-16	NA	117545642	117654252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
Isoform_24875_5	chr11	+	8660	21	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	19.6913051878234	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATGTAATTGCTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	117545640	117654254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
Isoform_24877_8	chr11	+	2663	16	FSM	ENSMUSG00000050106.19	ENSMUST00000106334.9	2644	16	-1	-18	-1	18	multi-exon	FALSE	canonical	2	4	junction_1	5.15708789488366	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTGGACAAGAGTTGC	7631	False	NA	NA	False	NA	NA	NA	117673139	117683954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117673235_117673875_117674097_117674220_117674370_117674596_117674747_117674935_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681607_117681733_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
Isoform_24878_3	chr11	+	2634	16	FSM	ENSMUSG00000050106.19	ENSMUST00000050874.14	2577	16	24	-81	6	-1	multi-exon	FALSE	canonical	2	3	junction_4	5.46504040851179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTGGAAATACTTGAA	7638	False	NA	NA	False	NA	NA	NA	117673146	117683935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117673235_117673875_117674097_117674220_117674370_117674596_117674747_117674938_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681607_117681733_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
Isoform_24879_8	chr11	+	3316	15	NIC	ENSMUSG00000050106.19	novel	2577	16	NA	NA	-1	15	intron_retention	FALSE	canonical	2	3	junction_3	5.31507290636732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTCTTGGACAAGAGT	7613	False	NA	NA	False	NA	NA	NA	117673121	117683951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_117674097_117674220_117674370_117674596_117674747_117674938_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681607_117681733_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
Isoform_24882_503	chr11	+	1486	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	32	2	4	-2	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	False	NA	12	True	AATAAA	-12	NA	117700525	117705107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
Isoform_24883_188	chr11	+	1516	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	2	2	2	-2	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	False	NA	12	True	AATAAA	-12	NA	117700495	117705107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
Isoform_24885_32	chr11	+	1403	4	FSM	ENSMUSG00000048277.16	ENSMUST00000120928.2	1402	4	-2	1	1	-1	multi-exon	FALSE	canonical	3	55	junction_1	286.604256772296	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTTGTGCTGGGTGGCG	NA	False	NA	13	True	AATAAA	-13	NA	117700519	117705108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117700630_117703374_117703523_117703871_117704012_117704103
Isoform_24886_41	chr11	+	2310	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	16	1	16	-1	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGGTTTTCTGTTTGTT	NA	False	NA	14	True	NA	NA	NA	117716765	117730733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
Isoform_24889_6	chr11	+	2732	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	-406	1	-406	-1	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGGTTTTCTGTTTGTT	NA	False	NA	14	True	NA	NA	NA	117716343	117730733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
Isoform_2489_8	chr10	-	2221	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	7	-15	7	15	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGTGTTAGTTATT	5788	False	NA	0	True	AATAAA	-30	NA	62859666	62850427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
Isoform_24890_3	chr11	+	820	3	NIC	ENSMUSG00000017718.16	novel	345	4	NA	NA	-12	497	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	28	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATGTAATAATTT	NA	False	NA	NA	False	NA	NA	NA	117716737	117723973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_117716833_117723170_117723276_117723353
Isoform_24892_3	chr11	+	2254	9	ISM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	6317	3	11	-3	3prime_fragment	FALSE	canonical	3	36	junction_7	7.01338006955277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGGGGTTTTCTGTTTG	NA	False	NA	12	True	NA	NA	NA	117723066	117730731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
Isoform_24898_62	chr11	+	3323	3	FSM	ENSMUSG00000017716.16	ENSMUST00000093906.5	3334	3	-1	12	-1	-1	multi-exon	FALSE	canonical	3	1683	junction_1	252.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTAAGCTCTGTCTGTC	NA	False	NA	28	True	AATAAA	-17	NA	117740143	117746557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117740288_117740579_117740690_117743488
Isoform_2490_150	chr10	-	1440	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	7	766	7	1	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5788	False	NA	-8	True	AATAAA	-13	NA	62859666	62851208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
Isoform_24901_1000	chr11	+	887	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	66	-6	-2	-5	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTCTGTCTTGGAGA	NA	False	NA	35	True	AATAAA	-24	NA	117740142	117746564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
Isoform_24902_300	chr11	+	970	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	-22	-1	-22	1	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAAGCTCTGTCTGTCTT	NA	False	NA	30	True	AATAAA	-19	NA	117740054	117746559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
Isoform_24906_24	chr11	+	770	3	NIC	ENSMUSG00000017716.16	novel	947	4	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	950.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTAAGCTCTGTCTGTC	NA	False	NA	28	True	AATAAA	-17	NA	117740142	117746557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_117740288_117743488_117743607_117746050
Isoform_2491_18	chr10	-	1522	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	143.298789980504	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5788	False	NA	-8	True	AATAAA	-13	NA	62859666	62851208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859416
Isoform_24910_833	chr11	+	2279	10	FSM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	582	2	-11	-2	multi-exon	FALSE	canonical	1	116	junction_9	67.5268579397108	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTGTTGCTCAAGTG	NA	False	NA	14	True	AATAAA	-12	NA	117877699	117914835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
Isoform_24913_25	chr11	+	2218	10	FSM	ENSMUSG00000017715.12	ENSMUST00000017859.10	2197	10	-21	0	-21	0	multi-exon	TRUE	canonical	1	46	junction_7	99.2782596518803	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877689	117914837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905472_117905549_117910432_117910559_117914230
Isoform_2492_33	chr10	-	1303	9	FSM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	328	2	5	1	multi-exon	FALSE	canonical	3	177	junction_7	118.49762655851	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5786	False	NA	-8	True	AATAAA	-13	NA	62859668	62851208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859498
Isoform_24920_148	chr11	+	2528	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	-3	6	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGTGCTTCTTTTGAG	NA	False	NA	12	True	CATAAA	-19	NA	118367763	118378605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
Isoform_24921_19	chr11	+	3935	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGATGTTGAGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	118367782	118380031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
Isoform_24922_8	chr11	+	2637	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGGTGCTTCTTTTGA	NA	False	NA	11	True	CATAAA	-18	NA	118367653	118378604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
Isoform_24923_283	chr11	+	2489	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	147	1428	4	8	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGCTTCTTTTGAGAA	NA	False	NA	14	True	CATAAA	-21	NA	118367801	118378607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
Isoform_24924_25	chr11	+	2638	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	-2	1428	-2	8	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGCTTCTTTTGAGAA	NA	False	NA	14	True	CATAAA	-21	NA	118367652	118378607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
Isoform_24925_20	chr11	+	3948	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	112	4	0	-4	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGATGTTGAGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	118367766	118380031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
Isoform_24927_8	chr11	+	2519	14	FSM	ENSMUSG00000033857.13	ENSMUST00000171769.8	3807	14	-19	1307	0	7	multi-exon	FALSE	canonical	2	6	junction_2	29.6532225814911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTGCTTCTTTTGAGA	NA	False	NA	13	True	CATAAA	-20	NA	118367766	118378606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_118367931_118369708_118369780_118369915_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
Isoform_24929_683	chr11	+	3685	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	122	0	122	0	multi-exon	FALSE	canonical	3	204	junction_1	10.9630059746403	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTGTTCTCTTCCCC	NA	False	NA	13	True	AATAAA	-15	NA	118913909	118922096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
Isoform_24931_12	chr11	+	3869	6	NNC	ENSMUSG00000025577.8	novel	3807	5	NA	NA	121	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_4	102.4331977437	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTGTTCTCTTCCCC	NA	False	NA	13	True	AATAAA	-15	NA	118913908	118922096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118917503_118917687_118918724
Isoform_24932_19	chr11	+	3765	4	NIC	ENSMUSG00000025577.8	novel	3807	5	NA	NA	119	0	intron_retention	FALSE	canonical	3	213	junction_1	8.73053390247253	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTGTTCTCTTCCCC	NA	False	NA	13	True	AATAAA	-15	NA	118913906	118922096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_118914128_118915000_118915067_118917275_118917382_118918724
Isoform_24933_3	chr11	+	3048	14	ISM	ENSMUSG00000039963.21	ENSMUST00000236813.2	4769	21	9604	-7	-516	7	3prime_fragment	FALSE	canonical	0	0	junction_2	4.428257835269	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAGAGTTAAGACACAT	2286	False	NA	NA	False	AATAAA	-22	NA	119129027	119156071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_119129075_119133252_119133411_119133538_119133662_119133822_119133945_119136660_119136905_119136993_119137177_119141764_119142011_119142628_119142843_119144075_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
Isoform_24934_4	chr11	+	3185	14	NIC	ENSMUSG00000039963.21	novel	799	5	NA	NA	-126	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.428257835269	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGTTAAGACACATTTA	2676	False	NA	NA	False	AATAAA	-25	NA	119129417	119156074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_119129599_119133252_119133411_119133538_119133662_119133822_119133945_119136660_119136905_119136993_119137177_119141764_119142011_119142628_119142843_119144075_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
Isoform_24935_8	chr11	+	1960	6	ISM	ENSMUSG00000039963.21	ENSMUST00000236813.2	4769	21	24404	-8	-551	8	3prime_fragment	FALSE	canonical	0	0	junction_1	4.84148737476408	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAGTTAAGACACATT	NA	False	NA	NA	False	AATAAA	-23	NA	119143827	119156072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
Isoform_24936_32	chr11	+	3424	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	-61	0	-61	0	multi-exon	TRUE	canonical	3	38	junction_1	100.783495768854	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158790	119176280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
Isoform_24937_110	chr11	+	3367	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	-3	-1	-3	1	multi-exon	FALSE	canonical	3	38	junction_1	100.783495768854	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158848	119176281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
Isoform_24938_311	chr11	+	3498	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	136	-1	-3	1	multi-exon	FALSE	canonical	3	393	junction_7	40.3001893687597	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158848	119176281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
Isoform_24939_1433	chr11	+	3466	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	168	-1	27	1	multi-exon	FALSE	canonical	3	393	junction_7	40.3001893687597	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158880	119176281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
Isoform_2497_118	chr10	-	1395	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	7	766	7	1	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5788	False	NA	-8	True	AATAAA	-13	NA	62859666	62851208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
Isoform_24972_4	chr11	+	2625	17	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	13.6358901432946	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATACAATATTCTGTGG	NA	False	NA	NA	False	ATTAAA	-23	NA	119246429	119271878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_119246466_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
Isoform_24975_4	chr11	+	7909	40	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-35296	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	27.8500729168294	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	NA	False	NA	13	True	AATAAA	-13	NA	119333586	119378243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
Isoform_24977_3	chr11	+	7939	40	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-35323	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	29.023828882455	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	NA	False	NA	13	True	AATAAA	-13	NA	119333559	119378243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340067_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
Isoform_24979_6	chr11	+	5507	29	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-19777	5	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_5	23.9813650017454	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTTTGGGCTGGGC	NA	False	NA	19	True	AATAAA	-19	NA	119349105	119378249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
Isoform_2498_8	chr10	-	1474	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	-66	760	-66	4	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCTACTTTTTATA	5715	False	NA	-2	True	AATAAA	-19	NA	62859739	62851202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
Isoform_24981_6	chr11	+	5055	27	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-18061	3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	23.9603963180073	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTCCTGTTTGGGCTGG	NA	False	NA	17	True	AATAAA	-17	NA	119350821	119378247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
Isoform_24988_8	chr11	+	3404	16	ISM	ENSMUSG00000070327.15	ENSMUST00000131035.10	16716	67	77069	0	-7888	0	3prime_fragment	FALSE	canonical	3	92	junction_3	20.2730253182784	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	5413	False	NA	14	True	AATAAA	-14	NA	119360994	119378244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
Isoform_2499_7	chr10	-	2186	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	-4	-14	-4	14	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGTTGTGTTAGTTAT	5777	False	NA	-1	True	AATAAA	-29	NA	62859677	62850428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
Isoform_24991_9	chr11	+	2945	12	ISM	ENSMUSG00000070327.15	ENSMUST00000131035.10	16716	67	81192	-2	-3765	2	3prime_fragment	FALSE	canonical	3	107	junction_2	13.3218269910762	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTCCTGTTTGGGCTG	9536	False	NA	16	True	AATAAA	-16	NA	119365117	119378246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
Isoform_25002_30	chr11	+	3101	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	37	1932	-5	-88	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGAGTGTCTGGGGAGC	6291	False	NA	7	True	ATTAAA	-18	NA	119382209	119400317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
Isoform_25003_51	chr11	+	1385	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	28	3657	0	15	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATGGGTCACTCTTAC	6282	False	NA	NA	False	AATACA	-23	NA	119382200	119398592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
Isoform_25004_5	chr11	+	5038	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	29	3	1	-3	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	6283	False	NA	NA	False	NA	NA	NA	119382201	119402246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
Isoform_25005_30	chr11	+	3181	8	FSM	ENSMUSG00000039850.17	ENSMUST00000106245.9	5126	8	-1	1946	-1	-88	multi-exon	FALSE	canonical	3	37	junction_3	3.65892813567591	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGAGTGTCTGGGGAGC	6536	False	NA	7	True	ATTAAA	-18	NA	119382454	119400317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
Isoform_25007_3	chr11	+	5111	8	FSM	ENSMUSG00000039850.17	ENSMUST00000106245.9	5126	8	-1	16	-1	-2	multi-exon	FALSE	canonical	3	37	junction_3	3.65892813567591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	6536	False	NA	NA	False	NA	NA	NA	119382454	119402247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
Isoform_25009_6	chr11	+	2512	3	ISM	ENSMUSG00000025583.16	ENSMUST00000130049.8	3384	7	64	109508	44	-109508	5prime_fragment	FALSE	canonical	3	106	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAGAAATAAAAAGGA	2214	False	NA	NA	False	NA	NA	NA	119493884	119563599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_119494798_119548489_119548593_119562103
Isoform_25010_3	chr11	+	2020	8	ISM	ENSMUSG00000025583.16	ENSMUST00000125583.8	2569	13	95	24088	5	16807	5prime_fragment	FALSE	canonical	3	97	junction_7	8.79935062539114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCCCAGCTATAAAGCG	2155	False	NA	NA	False	AATAAA	-23	NA	119493825	119689914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594
Isoform_25011_4	chr11	+	3683	14	FSM	ENSMUSG00000025583.16	ENSMUST00000147772.8	3662	14	-20	-1	0	1	multi-exon	FALSE	canonical	3	94	junction_8	9.2863710022017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2150	False	NA	NA	False	ACTAAA	-26	NA	119493820	119735866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507
Isoform_25012_14	chr11	+	3562	22	NIC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	24.7230464333041	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTTTGTATTTGTTGC	2150	False	NA	NA	False	ATTAAA	-16	NA	119493820	119758206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119757979
Isoform_25013_148	chr11	+	6730	34	FSM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	-136	0	-2	0	multi-exon	TRUE	canonical	3	92	junction_14	15.8664073872836	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCGCTGCCCTTGCCAG	2168	False	NA	8	True	AATAAA	-15	NA	119493838	119790233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
Isoform_2502_10	chr10	-	1262	9	NIC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	177	junction_7	135.128411150283	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCTACTTTTTATA	5788	False	NA	-2	True	AATAAA	-19	NA	62859666	62851202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62855171_62855307_62859498
Isoform_25024_22	chr11	+	2119	7	ISM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	6	0	6	0	intron_retention	FALSE	canonical	3	311	junction_5	12.2667119564381	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTTAGTGTCTTGGT	NA	False	NA	18	True	ATTAAA	-33	NA	119804641	119810374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809
Isoform_25025_708	chr11	+	1535	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	20	2	0	-2	multi-exon	FALSE	canonical	3	311	junction_5	11.6303613925986	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGTTTAGTGTCTTG	NA	False	NA	16	True	ATTAAA	-31	NA	119804655	119810372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
Isoform_2503_5	chr10	-	1193	8	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	5	4	combination_of_known_splicesites	FALSE	canonical	3	22	junction_4	172.168877701458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCTACTTTTTATA	5786	False	NA	-2	True	AATAAA	-19	NA	62859668	62851202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853302_62853390_62853819_62854005_62855171_62855307_62859498
Isoform_25030_9	chr11	+	1425	7	NIC	ENSMUSG00000025371.13	novel	1557	8	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	121.939420296401	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGTTTAGTGTCTTG	NA	False	NA	16	True	ATTAAA	-31	NA	119804655	119810372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_119804764_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
Isoform_25035_7	chr11	+	3193	14	FSM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	325	0	-28	0	multi-exon	TRUE	canonical	2	3	junction_13	10.9230769230769	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTGGTCTGTGCCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	119833913	119893447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
Isoform_25036_17	chr11	+	2113	15	FSM	ENSMUSG00000025372.17	ENSMUST00000106233.2	2442	15	329	0	-24	0	multi-exon	FALSE	canonical	2	2	junction_13	13.1158495799579	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	119833917	119897608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119893863_119893912_119897184
Isoform_25037_74	chr11	+	2065	14	FSM	ENSMUSG00000025372.17	ENSMUST00000026436.10	2394	14	329	0	-24	0	multi-exon	FALSE	canonical	3	19	junction_13	8.07215976759687	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	119833917	119897608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119897184
Isoform_25038_4	chr11	+	1943	14	NIC	ENSMUSG00000025372.17	novel	2394	14	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	11.5282005657441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGTGTGGTCTGTT	NA	False	NA	8	True	AATAAA	-14	NA	119833917	119897606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887834_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119897184
Isoform_25039_247	chr11	+	498	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	1	282	1	9	multi-exon	FALSE	canonical	3	883	junction_2	30.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTCTCTCCCAAGGACA	NA	False	NA	15	True	TATAAA	-15	NA	119989754	119991249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119989892_119989973_119990085_119990999
Isoform_2504_5	chr10	-	1142	8	NIC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_4	179.751302115575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5786	False	NA	-8	True	AATAAA	-13	NA	62859668	62851208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853302_62853390_62853864_62854005_62855171_62855307_62859498
Isoform_25040_12	chr11	+	780	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	1	0	1	0	multi-exon	FALSE	canonical	3	883	junction_2	30.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGCTGGAGAGATTGT	NA	False	NA	NA	False	AATAAA	-18	NA	119989754	119991531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119989892_119989973_119990085_119990999
Isoform_25041_5	chr11	+	570	2	FSM	ENSMUSG00000078572.4	ENSMUST00000186913.2	401	2	-159	-10	-4	10	multi-exon	FALSE	canonical	3	883	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTCTCCCAAGGACAA	NA	False	NA	16	True	TATAAA	-16	NA	119989765	119991250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_119990085_119990999
Isoform_25046_6	chr11	+	2971	5	ISM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	-14	0	-14	0	intron_retention	FALSE	canonical	3	99	junction_3	18.3439363278441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	194	False	NA	NA	False	AATAAA	-20	NA	120348926	120355184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831
Isoform_25047_271	chr11	+	2759	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	19	0	-4	0	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	227	False	NA	NA	False	AATAAA	-20	NA	120348959	120355184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
Isoform_2505_17	chr10	-	2304	4	FSM	ENSMUSG00000020067.9	ENSMUST00000218978.2	1833	4	12	-483	12	1	multi-exon	FALSE	canonical	3	18	junction_3	3.29983164553722	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCATGT	NA	False	NA	NA	False	AATAAA	-13	NA	62958451	62951572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680
Isoform_25051_47	chr11	+	2794	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	-16	0	-16	0	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	192	False	NA	NA	False	AATAAA	-20	NA	120348924	120355184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
Isoform_25054_5	chr11	+	2541	5	NIC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	4	junction_2	56.7978872846517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCAATGAGAACATTCT	218	False	NA	NA	False	AATAAA	-16	NA	120348950	120355180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120349105_120349437_120349572_120352541_120352625_120352831_120352912_120353090
Isoform_25056_15	chr11	+	3161	21	ISM	ENSMUSG00000025793.18	ENSMUST00000106203.9	2903	22	26	3	26	-3	intron_retention	FALSE	canonical	3	105	junction_14	77.2154615345916	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCATGATTGATTGT	8208	False	NA	10	True	AATAAA	-11	NA	120358486	120374802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840
Isoform_25057_299	chr11	+	2867	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106203.9	2903	22	32	4	32	-4	multi-exon	FALSE	canonical	3	105	junction_14	76.3896503775692	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8214	False	NA	9	True	AATAAA	-10	NA	120358492	120374801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
Isoform_2506_3	chr10	-	4834	19	ISM	ENSMUSG00000020067.9	ENSMUST00000095580.3	5246	20	10847	-1	10847	1	3prime_fragment	FALSE	canonical	1	2	junction_11	6.62114085130648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCATGT	NA	False	NA	NA	False	AATAAA	-13	NA	63028884	62951572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62981614_62981988_62983655_62983773_62985801_62985826_62988573_62988716_62998000_62998073_62999291_62999404_63003011_63003064_63005033_63005210_63028165
Isoform_25060_69	chr11	+	3146	21	ISM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	38	3	38	-3	intron_retention	FALSE	canonical	3	286	junction_14	46.7074940453885	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCATGATTGATTGT	8220	False	NA	10	True	AATAAA	-11	NA	120358498	120374802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840
Isoform_25061_811	chr11	+	2859	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	38	3	38	-3	multi-exon	FALSE	canonical	3	286	junction_14	47.8204313112466	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCATGATTGATTGT	8220	False	NA	10	True	AATAAA	-11	NA	120358498	120374802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
Isoform_25068_384	chr11	+	959	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	46	311	46	297	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCCTGAACCTTG	9001	False	NA	25	True	TATAAA	-17	NA	120375484	120379580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
Isoform_25069_876	chr11	+	907	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	46	363	46	245	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGTGTGTGTGCCCA	9001	False	NA	-27	True	AATATA	-22	NA	120375484	120379528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
Isoform_2507_3	chr10	-	5256	20	FSM	ENSMUSG00000020067.9	ENSMUST00000095580.3	5246	20	5	-15	5	15	multi-exon	TRUE	canonical	1	2	junction_11	6.54919588644307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	63039726	62951558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62981614_62981988_62983655_62983773_62985801_62985826_62988573_62988716_62998000_62998073_62999291_62999404_63003011_63003064_63005033_63005210_63028165_63029063_63039496
Isoform_25070_42	chr11	+	952	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	1	363	1	245	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGTGTGTGTGCCCA	8956	False	NA	-27	True	AATATA	-22	NA	120375439	120379528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
Isoform_25071_17	chr11	+	985	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	19	312	19	296	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGTCCTGAACCTT	8974	False	NA	24	True	TATAAA	-16	NA	120375457	120379579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
Isoform_25076_257	chr11	+	1987	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	36	0	-12	0	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	False	NA	23	True	AATAAA	-37	NA	120382701	120390013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
Isoform_25078_6	chr11	+	2468	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	36	-481	-12	481	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTAGAGTAATTTGTT	NA	False	NA	NA	False	TATAAA	-37	NA	120382701	120390494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
Isoform_25079_223	chr11	+	711	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	91	2427	-20	-5	multi-exon	FALSE	canonical	3	903	junction_1	470.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGGCCAAAACCTTCA	3991	False	NA	124	True	AATAAA	-12	NA	120489337	120496597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120489431_120490067_120490195_120496106
Isoform_25081_518	chr11	+	622	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	91	2516	-20	-94	multi-exon	FALSE	canonical	3	903	junction_1	470.5	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGCTTGCCT	3991	False	NA	35	True	AGTAAA	-24	NA	120489337	120496508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120489431_120490067_120490195_120496106
Isoform_25082_38	chr11	+	799	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	3	2427	3	-5	multi-exon	FALSE	canonical	3	903	junction_1	470.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGGCCAAAACCTTCA	3903	False	NA	124	True	AATAAA	-12	NA	120489249	120496597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120489431_120490067_120490195_120496106
Isoform_25083_101	chr11	+	668	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	45	2516	26	-94	multi-exon	FALSE	canonical	3	903	junction_1	470.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGCTTGCCT	3945	False	NA	35	True	AGTAAA	-24	NA	120489291	120496508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120489431_120490067_120490195_120496106
Isoform_25085_570	chr11	+	723	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	138	101	138	-101	multi-exon	FALSE	canonical	3	1006	junction_1	419	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGCTGGAGGCCTCTG	4149	False	NA	28	True	AGTAAA	-17	NA	120489495	120496501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120489697_120490067_120490195_120496106
Isoform_25086_290	chr11	+	819	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	138	5	138	-5	multi-exon	FALSE	canonical	3	1006	junction_1	419	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGGCCAAAACCTTCA	4149	False	NA	124	True	AATAAA	-12	NA	120489495	120496597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120489697_120490067_120490195_120496106
Isoform_25087_41	chr11	+	768	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	94	100	94	-100	multi-exon	FALSE	canonical	3	1006	junction_1	419	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGCTGGAGGCCTCTGC	4105	False	NA	29	True	AGTAAA	-18	NA	120489451	120496502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120489697_120490067_120490195_120496106
Isoform_25093_4	chr11	+	577	2	FSM	ENSMUSG00000044034.12	ENSMUST00000106195.3	542	2	-36	1	-36	-1	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTAAGGGTTGCTGG	1172	False	NA	NA	False	AATAAA	-13	NA	120499266	120499918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120499566_120499640
Isoform_25098_1070	chr11	+	1757	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	61	2	-3	0	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120563878	120600271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_25099_115	chr11	+	1836	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	-18	2	1	0	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120563799	120600271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_2510_9	chr10	-	4022	10	NIC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	95.9085212295782	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTTAACTTCCATTGT	NA	False	NA	-8	True	ATTAAA	-18	NA	63174811	63154793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63162438_63162564_63167523_63167677_63171414_63171657_63172758_63172876_63174343
Isoform_25102_19	chr11	+	1828	15	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	887	junction_3	60.5904619691305	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563877	120600270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120600073_120600169
Isoform_25105_25	chr11	+	2049	14	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	887	junction_3	62.6465618847222	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120563877	120600271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
Isoform_25106_20	chr11	+	2101	14	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	8	0	intron_retention	FALSE	canonical	3	887	junction_3	62.6465618847222	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120563825	120600271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
Isoform_25110_66	chr11	+	1886	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	238.262376383683	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564192	120600270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_25111_52	chr11	+	2074	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	243.577411833601	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120564192	120600271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_25113_35	chr11	+	2312	15	ISM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	375	2	-7	0	3prime_fragment	FALSE	canonical	3	887	junction_2	62.0699079215344	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120564192	120600271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_25119_6	chr11	+	2564	18	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	12.9044934637937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTCTCGTCCAGTTCC	6092	False	NA	NA	False	AATACA	-19	NA	120604778	120611949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120604880_120604993_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
Isoform_2512_139	chr10	-	3899	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	-2	8	1	-8	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTTAACTTCCATTGT	NA	False	NA	-8	True	ATTAAA	-18	NA	63174813	63154793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
Isoform_25120_118	chr11	+	2464	18	FSM	ENSMUSG00000025145.14	ENSMUST00000026139.14	2492	18	26	2	0	-2	multi-exon	FALSE	canonical	3	36	junction_12	7.88805763716247	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCGTCCAGTTCCTTT	6090	False	NA	NA	False	AATACA	-22	NA	120604776	120611952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
Isoform_25123_5	chr11	+	2398	17	FSM	ENSMUSG00000025145.14	ENSMUST00000145781.8	2390	17	-7	-1	-7	1	multi-exon	FALSE	canonical	1	1	junction_12	14.0844273490263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCTCGTCCAGTTCCT	6083	False	NA	NA	False	AATACA	-20	NA	120604769	120611950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
Isoform_25124_4	chr11	+	2875	16	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	3	2	intron_retention	FALSE	canonical	3	45	junction_11	6.07581727470104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	6093	False	NA	NA	False	AATACA	-21	NA	120604779	120611951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
Isoform_25125_3	chr11	+	2334	17	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	14.5911734877631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	6090	False	NA	NA	False	AATACA	-21	NA	120604776	120611951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
Isoform_25126_7	chr11	+	1060	6	FSM	ENSMUSG00000018012.12	ENSMUST00000142229.2	589	6	-108	-363	-5	0	multi-exon	FALSE	canonical	1	1	junction_1	23.4486673395313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	3793	False	NA	14	True	AATAAA	-14	NA	120612290	120614795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120612447_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
Isoform_25127_69	chr11	+	1081	6	FSM	ENSMUSG00000018012.12	ENSMUST00000018156.12	1076	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	29	junction_1	12.4739729036101	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	3793	False	NA	14	True	AATAAA	-14	NA	120612290	120614795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120612468_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
Isoform_2513_145	chr10	-	3843	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	55	7	55	-7	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTTAACTTCCATTGTT	NA	False	NA	-7	True	ATTAAA	-19	NA	63174756	63154792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
Isoform_25130_4	chr11	+	1117	5	FSM	ENSMUSG00000018012.12	ENSMUST00000134322.2	717	5	5	-405	5	1	multi-exon	FALSE	canonical	3	54	junction_2	3.80788655293195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCGCTGTCTGCCCT	4347	False	NA	15	True	AATAAA	-15	NA	120612844	120614796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
Isoform_25131_4	chr11	+	1366	5	FSM	ENSMUSG00000018012.12	ENSMUST00000134322.2	717	5	-244	-405	197	1	multi-exon	FALSE	canonical	3	54	junction_2	3.80788655293195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCGCTGTCTGCCCT	4098	False	NA	15	True	AATAAA	-15	NA	120612595	120614796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
Isoform_25132_118	chr11	+	1922	13	FSM	ENSMUSG00000025156.18	ENSMUST00000100134.10	1925	13	7	-4	-3	0	multi-exon	FALSE	canonical	3	682	junction_1	150.079122650539	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1401	False	NA	1	True	ATTAAA	-18	NA	120675107	120679927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
Isoform_25133_1004	chr11	+	1849	14	FSM	ENSMUSG00000025156.18	ENSMUST00000116305.8	1827	14	-23	1	-3	0	multi-exon	FALSE	canonical	3	682	junction_1	155.049677093711	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1401	False	NA	1	True	ATTAAA	-18	NA	120675107	120679927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_25137_91	chr11	+	1845	14	FSM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	-3	1	-3	-1	multi-exon	TRUE	canonical	3	121	junction_6	299.627579489159	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1401	False	NA	0	True	ATTAAA	-17	NA	120675107	120679926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_25139_26	chr11	+	2133	13	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	-61	1	-61	0	intron_retention	FALSE	canonical	3	238	junction_1	261.317003635219	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1573	False	NA	1	True	ATTAAA	-18	NA	120675279	120679927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
Isoform_25140_541	chr11	+	2071	14	FSM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	-71	0	-71	0	multi-exon	FALSE	canonical	3	238	junction_1	255.452956564905	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1563	False	NA	2	True	ATTAAA	-19	NA	120675269	120679928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_25142_24	chr11	+	2193	14	FSM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	-193	0	17	0	multi-exon	FALSE	canonical	3	238	junction_1	255.452956564905	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1441	False	NA	2	True	ATTAAA	-19	NA	120675147	120679928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_25144_23	chr11	+	1979	14	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	3	121	junction_6	355.513163564242	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1650	False	NA	0	True	ATTAAA	-17	NA	120675356	120679926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_25145_21	chr11	+	2057	14	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_6	355.513163564242	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1574	False	NA	2	True	ATTAAA	-19	NA	120675280	120679928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_25150_829	chr11	+	2209	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	29	2097	29	-4	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGTTCTGGCCCTCA	NA	False	NA	18	True	NA	NA	NA	120839935	120849597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
Isoform_25151_106	chr11	+	2261	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	-23	2097	5	-4	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGTTCTGGCCCTCA	NA	False	NA	18	True	NA	NA	NA	120839883	120849597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
Isoform_25156_77	chr11	+	2113	5	FSM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	43	230	29	-5	multi-exon	FALSE	canonical	3	33	junction_1	128.437484793186	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGGTTCTGGCCCTC	NA	False	NA	17	True	NA	NA	NA	120839935	120849596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120839977_120846051_120846296_120846624_120846769_120847180_120847949_120848680
Isoform_25157_16	chr11	+	2164	5	FSM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	0	222	0	3	multi-exon	FALSE	canonical	3	33	junction_1	128.437484793186	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGCCCTCATTAGCTC	NA	False	NA	25	True	AAAAAG	-3	NA	120839892	120849604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120839977_120846051_120846296_120846624_120846769_120847180_120847949_120848680
Isoform_25162_20	chr11	+	1858	2	FSM	ENSMUSG00000039329.9	ENSMUST00000155694.2	406	2	0	-1452	0	0	multi-exon	FALSE	canonical	3	732	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	26	True	AATAAA	-20	NA	121036982	121039145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121037049_121037353
Isoform_25163_1190	chr11	+	1734	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	11	0	-3	0	multi-exon	FALSE	canonical	3	732	junction_1	1	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	26	True	AATAAA	-20	NA	121036979	121039145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121037049_121037353_121037428_121037554
Isoform_25166_23	chr11	+	1767	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	732	junction_1	1	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	26	True	AATAAA	-20	NA	121036946	121039145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121037049_121037353_121037428_121037554
Isoform_25168_25	chr11	+	2364	13	FSM	ENSMUSG00000039307.17	ENSMUST00000038831.15	2378	13	18	-4	16	4	multi-exon	FALSE	canonical	3	4	junction_9	6.31576510716547	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCTAATCAGCTTTTT	NA	False	NA	16	True	AATAAA	-32	NA	121095276	121113485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105996_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111689_121111988_121112061_121112164_121112326_121112417_121113038
Isoform_25169_71	chr11	+	2120	13	NIC	ENSMUSG00000039307.17	novel	2378	13	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	4.60675832036175	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCCACCAGCAGAAACTC	NA	False	NA	3	True	AATAAA	-19	NA	121095288	121113472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105996_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
Isoform_25171_3	chr11	+	2066	12	NIC	ENSMUSG00000039307.17	novel	2378	13	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	6.09023062707063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGCAGAAACTCTAATCA	NA	False	NA	9	True	AATAAA	-25	NA	121095258	121113478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105996_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121113038
Isoform_25172_3	chr11	+	2032	12	NIC	ENSMUSG00000039307.17	novel	2378	13	NA	NA	26	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	7.29994905450354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTCTAATCAGCTTTT	NA	False	NA	15	True	AATAAA	-31	NA	121095286	121113484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105996_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112326_121112417_121113038
Isoform_25173_179	chr11	+	3101	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	2	1292	2	-1292	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGCATTGAAGGAGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	121128080	121145390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
Isoform_25176_65	chr11	+	3128	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	-31	1298	-31	-1298	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGTGGCATTGAAG	NA	False	NA	NA	False	AATAAA	-14	NA	121128047	121145384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
Isoform_25181_124	chr11	+	4995	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	32	2	32	-2	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATACAGAGTATCATT	4694	False	NA	NA	False	AATAAA	-18	NA	121150847	121200720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
Isoform_25182_86	chr11	+	3828	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	-10	1211	-10	-1211	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTGTGTGCCCACCGC	4652	False	NA	17	True	AATAAA	-23	NA	121150805	121199511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
Isoform_2519_39	chr10	-	3779	8	FSM	ENSMUSG00000020063.17	ENSMUST00000105442.3	3740	8	5	-44	2	-7	multi-exon	FALSE	canonical	3	29	junction_7	79.0360289839452	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTTAACTTCCATTGTT	NA	False	NA	-7	True	ATTAAA	-19	NA	63174809	63154792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63174343
Isoform_25190_7	chr11	+	3701	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	-32	1360	-32	-1360	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTCTAAGTATTGCT	4630	False	NA	NA	False	CATAAA	-15	NA	121150783	121199362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
Isoform_25194_20	chr11	+	3831	9	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-16	-1211	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	71.1634342552409	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTGTGTGCCCACCGC	4646	False	NA	17	True	AATAAA	-23	NA	121150799	121199511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197596
Isoform_25196_33	chr11	+	4993	9	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	71.1634342552409	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATACAGAGTATCATTG	4694	False	NA	NA	False	AATAAA	-19	NA	121150847	121200721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197596
Isoform_25200_15	chr11	+	4824	8	NIC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	88.9058203829152	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4657	False	NA	NA	False	AATAAA	-20	NA	121150810	121200722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121197593
Isoform_2521_4	chr10	-	1695	3	NIC	ENSMUSG00000097134.3	novel	2229	4	NA	NA	-52	298	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTATTCTATTTCTT	NA	False	NA	-3	True	AATAAA	-16	NA	66753570	66747969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_66749445_66751634_66751739_66753454
Isoform_25211_8	chr11	+	5115	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	108.060796788054	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATACAGAGTATCATT	4691	False	NA	NA	False	AATAAA	-18	NA	121150844	121200720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_121151349_121157681_121157799_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
Isoform_25214_62	chr11	+	2496	6	FSM	ENSMUSG00000039253.8	ENSMUST00000038096.8	2520	6	24	0	24	0	multi-exon	TRUE	canonical	3	26	junction_4	7.30479294709987	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAAGACTGGTATATTT	3881	False	NA	NA	False	AATAAA	-20	NA	121312250	121322114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121312430_121315751_121315904_121316380_121316473_121317446_121317530_121319870_121319994_121320247
Isoform_25216_853	chr11	+	3896	39	FSM	ENSMUSG00000039230.15	ENSMUST00000103013.10	3906	39	10	0	10	0	multi-exon	TRUE	canonical	0	0	junction_21	67.5521189983218	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342784	121507990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
Isoform_2522_3	chr10	-	481	2	FSM	ENSMUSG00000097134.3	ENSMUST00000219021.2	388	2	-87	-6	-87	6	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTCTAACTTTAAAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	66753605	66751408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_66751739_66753454
Isoform_25220_24	chr11	+	3838	38	NIC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	38	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	78.8302537837747	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342812	121507990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
Isoform_2523_20	chr10	-	2698	9	NNC	ENSMUSG00000019873.9	novel	5430	8	NA	NA	0	-202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.3869167005964	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATCTTGTATCTCCAT	NA	False	NA	NA	False	AATAAA	-23	NA	66932724	66847652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_66848265_66848311_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
Isoform_25233_3	chr11	+	1360	4	FSM	ENSMUSG00000039208.16	ENSMUST00000036742.14	1401	4	13	28	13	-8	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGATGCCTTGGTGTG	646	False	NA	NA	False	NA	NA	NA	121593249	121607104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121593622_121598555_121598942_121605522_121605583_121606562
Isoform_25234_4	chr11	+	3201	4	FSM	ENSMUSG00000039198.9	ENSMUST00000036690.7	3194	4	1	-8	1	8	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGTGTTATGTTTAT	2485	False	NA	NA	False	ATTAAA	-17	NA	121721073	121734257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_121722086_121722870_121722993_121727206_121727353_121732336
Isoform_25235_163	chr11	+	2414	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5016	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	31.5170080957562	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1440	False	NA	18	True	TATAAA	-20	NA	87739024	87754629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_25237_61	chr11	+	2317	17	NNC	ENSMUSG00000034121.13	novel	688	4	NA	NA	-5029	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	42.5595171495166	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1427	False	NA	18	True	TATAAA	-20	NA	87739011	87754629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_87739055_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_25238_34	chr11	+	2696	19	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	-5017	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	43.9924235901289	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	1439	False	NA	17	True	TATAAA	-19	NA	87739023	87754628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_87739055_87743873_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_25239_5	chr11	+	1797	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-7	1023	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	270.059697104177	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4654670	4683546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4683289_4683311
Isoform_25240_171	chr11	+	790	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654670	4687669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
Isoform_25242_42	chr11	+	837	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654623	4687669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
Isoform_25250_5	chr11	+	4640	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8316	-2	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAATCTCTGTTCATG	9540	False	NA	NA	False	AATAAA	-17	NA	104200542	104222914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
Isoform_25251_16	chr11	+	2728	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8362	1695	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACGCATGTATCTTGAAA	9494	False	NA	NA	False	NA	NA	NA	104200496	104220956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
Isoform_25253_7	chr11	+	3993	20	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-11717	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_1	21.901314801347	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	1584	False	NA	14	True	AATAAA	-14	NA	119357165	119378244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
Isoform_25259_6	chr11	+	6328	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-957	-4	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_16	42.866617256322	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTATTGTTACATATG	9461	False	NA	5	True	AATAAA	-13	NA	107437798	107577765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_25260_4	chr11	+	6442	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1069	-2	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_16	42.866617256322	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTGTTACATATGTT	9349	False	NA	7	True	AATAAA	-15	NA	107437686	107577767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_25261_14	chr11	+	6443	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1071	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	38.1200688409334	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9347	False	NA	9	True	AATAAA	-17	NA	107437684	107577769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_25264_8	chr11	+	6387	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1069	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_15	41.902244891546	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9349	False	NA	9	True	AATAAA	-17	NA	107437686	107577769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_25266_14	chr11	+	6409	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1094	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	36.7501052969107	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9324	False	NA	9	True	AATAAA	-17	NA	107437661	107577769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
Isoform_2527_62	chr10	-	953	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	-17	4494	-17	-2011	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATTTTCTAACCTGAT	NA	False	NA	-11	True	AATAAA	-15	NA	66932741	66849461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
Isoform_25272_70	chr11	+	2325	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-1285	1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	266.148872291848	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAAGTGTGGTCTTTGC	NA	False	NA	15	True	AATAAA	-20	NA	57993693	58009421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
Isoform_25275_53	chr11	+	2931	10	NNC	ENSMUSG00000059248.14	novel	778	7	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	196.831569283656	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	NA	False	NA	83	True	AATAAA	-8	NA	117217241	117253131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_117217386_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_25278_22	chr11	+	1271	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53085	-494	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	112	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATACTTTTTTTTT	NA	False	NA	44	True	NA	NA	NA	62402518	62404749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_62402636_62402963_62403098_62403729
Isoform_25282_46	chr11	+	3878	18	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-470	1	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_1	112.518818110864	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107281	106139966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
Isoform_25288_57	chr11	+	1228	7	NNC	ENSMUSG00000042569.14	novel	1553	7	NA	NA	29	-277	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	85.6536955160462	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	34	True	AATAAA	-31	NA	60721533	60748972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_60721587_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
Isoform_25289_28	chr11	+	989	2	Intergenic	novelGene_1857	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTTTGGTTGATCAC	NA	False	NA	22	True	NA	NA	NA	79864558	79866012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79864672_79865136
Isoform_2529_12	chr10	-	5383	9	NNC	ENSMUSG00000019873.9	novel	2925	9	NA	NA	-1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.3869167005964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGTATTTTTTTTTCT	NA	False	NA	0	True	AATAAA	-23	NA	66932725	66844968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_66848265_66848311_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
Isoform_25290_16	chr11	+	1043	2	Intergenic	novelGene_1856	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTTTGGTTGATCAC	NA	False	NA	22	True	NA	NA	NA	79864504	79866012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79864672_79865136
Isoform_25293_3	chr11	+	1119	2	Intergenic	novelGene_1855	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTTTGGTTGATCAC	NA	False	NA	22	True	NA	NA	NA	79864428	79866012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79864672_79865136
Isoform_25294_56	chr11	+	2440	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26187	7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	21.9696760710454	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTGTTGTTCTTTCTGG	1712	False	NA	8	True	AATAAA	-19	NA	32564781	32574594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_32564811_32565780_32565907_32567848_32567963_32572423
Isoform_25295_15	chr11	+	2491	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-4995	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	43.1100627307653	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1461	False	NA	18	True	TATAAA	-20	NA	87739045	87754629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_87739153_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_25296_9	chr11	+	2378	17	NNC	ENSMUSG00000034121.13	novel	688	4	NA	NA	-4995	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.6997369655009	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTCTGTGGACTCTCGT	1461	False	NA	16	True	TATAAA	-18	NA	87739045	87754627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_87739153_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752944_87753393_87753477_87753566_87753665_87753762
Isoform_2530_3	chr10	-	2818	9	NNC	ENSMUSG00000019873.9	novel	5430	8	NA	NA	0	-85	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	71.0817091451802	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCATTTCTCATGAAC	NA	False	NA	NA	False	AATAAA	-14	NA	66932724	66847535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_66848269_66848311_66849566_66850681_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
Isoform_25302_14	chr11	+	5816	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11141	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	10.5499083933345	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCAGTGTCTCGCTTGT	NA	False	NA	10	True	AATAAA	-17	NA	97295217	97393224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
Isoform_25303_29	chr11	+	2203	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	133.201631207028	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268624	50277355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_50268686_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
Isoform_25304_5	chr11	+	2396	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1436	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	17.6985781751385	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGACCATGCTGTGTTC	5677	False	NA	6	True	AATAAA	-9	NA	70546591	70553332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70547607_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_25305_8	chr11	+	2214	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1254	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	17.6985781751385	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGACCATGCTGTGTTC	5859	False	NA	6	True	AATAAA	-9	NA	70546773	70553332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70547607_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_25307_31	chr11	+	3291	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	224.925913728647	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGGCTTCTTCCTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	97697139	97729589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_97697190_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
Isoform_25308_23	chr11	+	1731	5	NNC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	1711	-5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	11.8400802362146	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTACCAGTCTGCTTCCT	NA	False	NA	8	True	AATAAA	-25	NA	100771555	100775989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_100771644_100771855_100772012_100772563_100772616_100772887_100772993_100774659
Isoform_25309_10	chr11	+	1694	4	NNC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	1696	-5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	13.2748718344933	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTACCAGTCTGCTTCCT	NA	False	NA	8	True	AATAAA	-25	NA	100771540	100775989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_100771644_100771855_100772012_100772887_100772993_100774659
Isoform_2531_10	chr10	-	1268	6	NIC	ENSMUSG00000019873.9	novel	838	3	NA	NA	29	-5	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	65.7346179725721	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGGTTGACATCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	66932695	66864709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_66865466_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
Isoform_25313_4	chr11	+	1625	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1376	-4	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	16.078320705043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGACCATGCTGTGTTC	5737	False	NA	6	True	AATAAA	-9	NA	70546651	70553332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70546896_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_25314_12	chr11	+	1528	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1272	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	16.078320705043	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	5841	False	NA	13	True	AATAAA	-16	NA	70546755	70553339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70546896_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_25315_3	chr11	+	1861	13	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1272	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.613909190781	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGCTGTGTTCCTTAG	5841	False	NA	11	True	AATAAA	-14	NA	70546755	70553337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70546896_70547271_70547607_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_2532_274	chr10	-	1812	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	-1	2	-1	-2	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTGAGTATGACT	NA	False	NA	NA	False	AATAAA	-19	NA	67121085	67102469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
Isoform_25321_18	chr11	+	527	5	NNC	ENSMUSG00000025142.19	novel	468	3	NA	NA	2677	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	436.370542085508	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120596016	120600271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_120596144_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_25322_20	chr11	+	1310	4	NNC	ENSMUSG00000001558.6	novel	2017	5	NA	NA	-788	4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	6.59966329107444	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTACTGGAAAATGTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	100331954	100347852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_100332042_100337946_100338565_100347109_100347260_100347397
Isoform_25323_13	chr11	+	1465	8	NNC	ENSMUSG00000020877.12	novel	826	3	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	41.1958983494271	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGATCTCAAGTCTAT	NA	False	NA	16	True	AATAAA	-22	NA	96920944	96924783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_96920999_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_25324_7	chr11	+	1524	8	NNC	ENSMUSG00000020877.12	novel	826	3	NA	NA	58	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	41.1958983494271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGGATCTCAAGTCTA	NA	False	NA	15	True	AATAAA	-21	NA	96920884	96924782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_96920999_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_25325_19	chr11	+	5130	22	NNC	ENSMUSG00000020532.19	novel	9513	56	NA	NA	26290	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	56.7144656348352	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	1967	False	NA	12	True	AATAAA	-20	NA	84197570	84292477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_84197739_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
Isoform_25326_14	chr11	+	3461	11	NNC	ENSMUSG00000019189.14	novel	614	2	NA	NA	-292	-1	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	109.849169318662	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTGTATTCCTGTGATG	9435	False	NA	11	True	AATAAA	-17	NA	44409498	44456346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_44409702_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
Isoform_2533_32	chr10	-	1866	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	-55	2	-55	-2	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTGAGTATGACT	NA	False	NA	NA	False	AATAAA	-19	NA	67121139	67102469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
Isoform_25331_13	chr11	+	3370	3	NNC	ENSMUSG00000040599.14	novel	3003	3	NA	NA	-11	0	intron_retention	FALSE	canonical	2	6	junction_1	59	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	16	True	AATAAA	-37	NA	70910425	70918197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70911372_70915375_70915538_70915935
Isoform_25332_10	chr11	+	2688	10	NNC	ENSMUSG00000038178.17	novel	744	5	NA	NA	-3422	-87	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.7143352554372	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCAGCTAATTACTGTAT	9854	False	NA	34	True	AATAAA	-37	NA	75448224	75464622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_75448387_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_25333_3	chr11	+	2851	10	NNC	ENSMUSG00000038178.17	novel	744	5	NA	NA	-3600	-102	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.7143352554372	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCTCCTCACGTATC	9676	False	NA	19	True	AATAAA	-22	NA	75448046	75464607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_75448387_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_25334_16	chr11	+	2518	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26183	7	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	27.0102861065105	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTGTTGTTCTTTCTGG	1708	False	NA	8	True	AATAAA	-19	NA	32564777	32574594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_32564885_32565780_32565907_32567848_32567963_32572423
Isoform_25335_14	chr11	+	612	2	NNC	ENSMUSG00000099928.2	novel	422	3	NA	NA	1449	38	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGAAATGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	95898163	95898919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_95898430_95898573
Isoform_25336_20	chr11	+	179	2	Antisense	novelGene_ENSMUSG00000093978.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	120	junction_1	0	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGCAGAGGCT	4091	False	NA	NA	False	NA	NA	NA	60458713	60566996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_60458766_60566869
Isoform_25337_13	chr11	+	5515	15	NNC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	4032	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	33.9546516304753	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCTTTT	NA	False	NA	15	True	AATAAA	-15	NA	87490509	87507123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_87490701_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_25341_12	chr11	+	2302	14	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-63	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	21.0108453257306	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGTATTTACTGGG	NA	False	NA	4	True	AATAAA	-15	NA	116744057	116765537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_116744166_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_25346_8	chr11	+	3889	6	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	28571	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	25.0647162361755	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	7169	False	NA	2	True	TATAAA	-14	NA	19933140	19974025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_19933245_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_25347_14	chr11	+	2204	2	NNC	ENSMUSG00000037573.6	novel	2288	2	NA	NA	-1612	-10	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAAATGCCTATCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	94100667	94106311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_94100872_94104311
Isoform_25348_5	chr11	+	594	2	Intergenic	novelGene_1324	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	533	False	NA	NA	False	NA	NA	NA	4883737	4884900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4883884_4884452
Isoform_25356_9	chr11	+	922	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2329	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTGGTCATTTAT	NA	False	NA	15	True	NA	NA	NA	78138900	78146318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_78138984_78141841_78142039_78145676
Isoform_25357_4	chr11	+	2256	4	NNC	ENSMUSG00000107677.3	novel	2719	3	NA	NA	-1312	-214	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4.18993502999218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAATAATGTTATGTC	1835	False	NA	NA	False	AATAAA	-5	NA	58642247	58650283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_58642396_58643956_58644171_58647616_58647657_58648429
Isoform_25359_8	chr11	+	2741	2	Antisense	novelGene_ENSMUSG00000082579.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	6727738	6741438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_6727932_6738890
Isoform_25360_12	chr11	+	1849	2	Intergenic	novelGene_1630	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGGTGCTGCGTCTT	NA	False	NA	NA	False	NA	NA	NA	62685585	62689373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_62685789_62687727
Isoform_25364_5	chr11	+	924	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2289	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	108.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTGGTCATTTA	NA	False	NA	14	True	NA	NA	NA	78138860	78146317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_78138947_78141841_78142039_78145676
Isoform_25365_4	chr11	+	1846	3	NNC	ENSMUSG00000058755.4	novel	773	2	NA	NA	1331	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	20	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGTCAGTCTTTTA	879	False	NA	4	True	TTTAAA	-17	NA	4187750	4191025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_4187820_4188405_4188543_4189385
Isoform_25366_4	chr11	+	1952	3	NNC	ENSMUSG00000058755.4	novel	773	2	NA	NA	1224	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	20	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTGTCAGTCTTTT	772	False	NA	3	True	TTTAAA	-16	NA	4187643	4191024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_4187820_4188405_4188543_4189385
Isoform_25367_10	chr11	+	160	2	Intergenic	novelGene_1542	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	44	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAAATAAATATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	53344505	53569204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_53344554_53569092
Isoform_25370_10	chr11	+	1590	3	NNC	ENSMUSG00000049721.15	novel	1749	3	NA	NA	2569	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	4	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTTTTTTTTTTGTT	NA	False	NA	NA	False	AGTAAA	-15	NA	3942501	3949325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_3942549_3946908_3947052_3947925
Isoform_25372_5	chr11	+	1735	12	NNC	ENSMUSG00000018906.15	novel	1997	3	NA	NA	-54	4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	24.5589188660203	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGCCTTATTTTGGAG	NA	False	NA	19	True	AATAAA	-21	NA	54003974	54022482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_54004043_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
Isoform_25373_5	chr11	+	1733	12	NNC	ENSMUSG00000018906.15	novel	1997	3	NA	NA	-52	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	24.1325540564868	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAATAGCCTTATT	NA	False	NA	13	True	AATAAA	-15	NA	54003976	54022476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_54004043_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
Isoform_25375_4	chr11	+	757	3	NNC	ENSMUSG00000085531.2	novel	520	2	NA	NA	-5369	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCTTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	55022500	55031019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_55022773_55023498_55023588_55030623
Isoform_25386_6	chr11	+	1066	5	NNC	ENSMUSG00000000581.9	novel	416	2	NA	NA	-9408	604	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	283.165146160328	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACACGGTTGTATGTC	NA	False	NA	20	True	AATAAA	-21	NA	17198170	17217228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_17198269_17212647_17212795_17213608_17213676_17213950_17214007_17216530
Isoform_25391_4	chr11	+	3620	14	NNC	ENSMUSG00000038178.17	novel	744	5	NA	NA	-1147	-92	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.0314236475764	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGTATCAGCTAATTAC	5724	False	NA	29	True	AATAAA	-32	NA	75421372	75464617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_75421930_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_25392_3	chr11	+	928	2	Intergenic	novelGene_2356	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCTCTGGGTTTCTGTT	NA	False	NA	11	True	NA	NA	NA	120524575	120525953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120525319_120525768
Isoform_25393_3	chr11	+	1759	4	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	8244	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	11.4309521329882	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTGTGGACATTGTAGG	3959	False	NA	NA	False	AATAAA	-18	NA	102167812	102170285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_102167916_102168003_102168118_102168701_102168940_102168981
Isoform_25395_6	chr11	+	1830	2	Intergenic	novelGene_1331	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAACCGTGTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	5407366	5414193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5407536_5412532
Isoform_25397_3	chr11	+	1417	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1086	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6393095433328	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGACCATGCTGTGTTC	6027	False	NA	6	True	AATAAA	-9	NA	70546941	70553332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_70546978_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_25398_4	chr11	+	504	3	Intergenic	novelGene_2378	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATCAGACTGTTTCCGT	NA	False	NA	NA	False	NA	NA	NA	121816463	121826062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_121816553_121824785_121824872_121825733
Isoform_25403_3	chr11	+	1370	9	NNC	ENSMUSG00000020610.18	novel	2816	9	NA	NA	-18	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.5692135988984	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTCGTGGGTAGAGT	NA	False	NA	10	True	AATAAA	-12	NA	109316753	109327582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_109316785_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_25405_4	chr11	+	1944	11	NNC	ENSMUSG00000020892.11	novel	4684	10	NA	NA	-2439	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.54964786985977	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTGTTTTGATGATG	1622	False	NA	21	True	AATAAA	-22	NA	69022528	69039941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_69022641_69023558_69023663_69023854_69024028_69024763_69024908_69024989_69025194_69025282_69025370_69025831_69026002_69026697_69026820_69033011_69033113_69033672_69033844_69039385
Isoform_25410_4	chr11	+	199	2	Intergenic	novelGene_1299	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGTTCATTAAACCCA	NA	False	NA	NA	False	NA	NA	NA	3646768	3825672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_3646820_3825524
Isoform_25414_3	chr11	+	4817	11	NNC	ENSMUSG00000020689.5	novel	5784	15	NA	NA	2550	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.66038867923396	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGGCCTGAGACTA	3687	False	NA	NA	False	ATTAAA	-12	NA	104530764	104561296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_104530862_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556459_104557905_104558841_104558873
Isoform_25416_352	chr11	+	175	1	Intergenic	novelGene_1425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGTTACCCAAGAATA	NA	False	NA	-1	True	NA	NA	NA	30432658	30432833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_30432700_30432800
Isoform_25418_15	chr11	-	181	1	Intergenic	novelGene_1426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	981	False	NA	NA	False	NA	NA	NA	30470899	30470718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_30470700_30470900
Isoform_2542_11	chr10	-	1895	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	73.1619208787376	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACCTTTGTTGAGTATG	NA	False	NA	NA	False	AATAAA	-16	NA	67121091	67102472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_67103946_67105804_67105926_67111348_67111434_67120875
Isoform_25422_25	chr11	+	176	1	Intergenic	novelGene_1305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATTCTGTATTTT	7717	False	NA	NA	False	NA	NA	NA	4042801	4042977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4042800_4043000
Isoform_25423_4	chr11	+	645	1	NIC	ENSMUSG00000043999.7	novel	2926	2	NA	NA	64	-7663	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	4128	False	NA	NA	False	NA	NA	NA	30835421	30836066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_30835400_30836100
Isoform_25424_11	chr11	+	4920	1	NIC	ENSMUSG00000020305.14	novel	3228	10	NA	NA	15	-70378	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	30904462	30909382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_30904500_30909400
Isoform_25425_3	chr11	-	3404	1	Genic_Genomic	ENSMUSG00000020309.7	novel	NA	NA	NA	NA	-3	-5998	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAACCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	30936353	30932949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_30932900_30936400
Isoform_25426_3	chr11	-	496	1	Genic_Genomic	ENSMUSG00000020309.7	novel	NA	NA	NA	NA	-3	-8906	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACATGGTCAGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	30936353	30935857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_30935900_30936400
Isoform_25427_17	chr11	+	174	1	Intergenic	novelGene_1306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATTAAAAAAAAGTTGTA	1680	False	NA	NA	False	NA	NA	NA	4050307	4050481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4050300_4050500
Isoform_2543_21	chr10	-	4238	5	FSM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	18	3	18	-3	multi-exon	FALSE	canonical	3	8	junction_3	4.58257569495584	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTGGTCTGTTCCTTC	NA	False	NA	-2	True	AATAAA	-17	NA	67748474	67721935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030_67745790_67748200
Isoform_25434_6	chr11	-	3781	1	Genic_Genomic	ENSMUSG00000020303.3	novel	NA	NA	NA	NA	-50	-903	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAACCAGGGCTCA	NA	False	NA	NA	False	AAGAAA	-11	NA	31320124	31316343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_31316300_31320100
Isoform_25436_6	chr11	-	167	1	Intergenic	novelGene_1427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTGGAGTAGTT	NA	False	NA	NA	False	NA	NA	NA	31383648	31383481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_31383500_31383600
Isoform_25437_56	chr11	-	176	1	Intergenic	novelGene_1428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGAATGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	31571860	31571684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_31571700_31571900
Isoform_25438_6	chr11	+	3580	1	Antisense	novelGene_ENSMUSG00000044502.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31615100	31618680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_31615100_31618700
Isoform_25443_4	chr11	-	5018	1	Antisense	novelGene_ENSMUSG00000020299.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTCTTGTCTGCAAAAT	NA	False	NA	NA	False	AATAAA	-23	NA	31932612	31927594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_31927600_31932600
Isoform_25444_5	chr11	-	1919	1	Intergenic	novelGene_1429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTGCATACCATCATTT	NA	False	NA	NA	False	NA	NA	NA	31932612	31930693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_31930700_31932600
Isoform_25446_3	chr11	-	4412	1	Intergenic	novelGene_1430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGACTAGTTGTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	31937017	31932605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_31932600_31937000
Isoform_25448_10	chr11	+	214	1	Intergenic	novelGene_1307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAACACAGGAGATAGAC	NA	False	NA	NA	False	NA	NA	NA	4063851	4064065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4063900_4064100
Isoform_25449_11	chr11	+	4752	1	Genic_Genomic	ENSMUSG00000020287.16	novel	NA	NA	NA	NA	-11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	32176493	32181245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_32176500_32181200
Isoform_25451_8	chr11	-	208	1	Intergenic	novelGene_1431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCAGAGCTGTGAGAAT	1078	False	NA	NA	False	AATATA	-3	NA	32236160	32235952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_32236000_32236200
Isoform_25452_4	chr11	-	209	1	Intergenic	novelGene_1432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGAGCTGTGAGAATTA	NA	False	NA	NA	False	AATATA	-5	NA	32249182	32248973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_32249000_32249200
Isoform_25453_22	chr11	-	178	1	Intergenic	novelGene_1433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTATAATCCCAGC	1923	False	NA	NA	False	NA	NA	NA	32408006	32407828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_32407800_32408000
Isoform_25454_9	chr11	-	2215	1	Antisense	novelGene_ENSMUSG00000044949.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32467236	32465021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_32465000_32467200
Isoform_25455_145	chr1	-	176	1	Intergenic	novelGene_702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATTTAGA	NA	False	NA	NA	False	NA	NA	NA	195027900	195027724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_195027700_195027900
Isoform_25456_8	chr11	+	197	1	Intergenic	novelGene_1434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAT	4505	False	NA	NA	False	NA	NA	NA	32567574	32567771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_32567600_32567800
Isoform_25457_221	chr14	+	177	1	Intergenic	novelGene_3413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6480	False	NA	NA	False	NA	NA	NA	25849084	25849261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_25849100_25849300
Isoform_25458_3	chr11	-	4851	1	Intergenic	novelGene_1436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATAAATGGGTTTCC	NA	False	NA	NA	False	NA	NA	NA	32592467	32587616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_32587600_32592500
Isoform_25459_22	chr11	-	178	1	Intergenic	novelGene_1437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	1339	False	NA	NA	False	NA	NA	NA	32613366	32613188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_32613200_32613400
Isoform_25460_24	chr11	-	182	1	Intergenic	novelGene_1438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCATATGCAGAGCTAAGA	NA	False	NA	NA	False	NA	NA	NA	32625372	32625190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_32625200_32625400
Isoform_25465_4	chr11	-	788	1	Intergenic	novelGene_1439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	32860078	32859290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_32859300_32860100
Isoform_25474_5	chr11	+	2367	1	Intergenic	novelGene_1440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33199664	33202031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_33199700_33202000
Isoform_25475_144	chrX	-	184	1	Intergenic	novelGene_12109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101248183	101247999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_101248000_101248200
Isoform_25476_5	chr11	-	177	1	Intergenic	novelGene_1441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATTTTTGAAAG	NA	False	NA	NA	False	NA	NA	NA	33385185	33385008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_33385000_33385200
Isoform_25478_8	chr11	+	5462	1	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTGATTAGGCACACAG	NA	False	NA	NA	False	NA	NA	NA	33432913	33438375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_33432900_33438400
Isoform_25479_5	chr11	+	185	1	Intergenic	novelGene_1442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCCTTTTTGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	33448136	33448321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_33448100_33448300
Isoform_25480_11	chr11	+	179	1	Intergenic	novelGene_1443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTGTAG	NA	False	NA	NA	False	NA	NA	NA	33455949	33456128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_33455900_33456100
Isoform_25481_5	chr11	+	870	1	Intergenic	novelGene_1444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGTCAAGGTGCTGAA	NA	False	NA	NA	False	NA	NA	NA	33457008	33457878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_33457000_33457900
Isoform_25483_5	chr11	+	1388	1	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTCTGTAACTCCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	33463069	33464457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_33463100_33464500
Isoform_25484_4	chr11	+	174	1	Intergenic	novelGene_1445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	33474271	33474445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_33474300_33474400
Isoform_25485_21	chr11	+	475	1	Intergenic	novelGene_1447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33484758	33485233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_33484800_33485200
Isoform_25486_46	chr11	+	176	1	Intergenic	novelGene_1450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTC	NA	False	NA	NA	False	NA	NA	NA	33494833	33495009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_33494800_33495000
Isoform_25487_4	chr11	-	2949	1	Intergenic	novelGene_1451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33500073	33497124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_33497100_33500100
Isoform_25488_9	chr11	-	177	1	Intergenic	novelGene_1452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACTAC	1459	False	NA	NA	False	NA	NA	NA	33512294	33512117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_33512100_33512300
Isoform_25490_3	chr11	+	1922	1	Intergenic	novelGene_1453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATAGGAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	33890290	33892212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_33890300_33892200
Isoform_25491_8	chr11	-	180	1	Intergenic	novelGene_1454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTGTGTGTGTGTG	3463	False	NA	NA	False	NA	NA	NA	33989689	33989509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_33989500_33989700
Isoform_25492_4	chr11	+	178	1	Intergenic	novelGene_1455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAGAAAAAAAGAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	34193984	34194162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_34194000_34194200
Isoform_25493_5	chr11	+	173	1	Intergenic	novelGene_1456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAATTCATATGA	NA	False	NA	NA	False	NA	NA	NA	34726540	34726713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_34726500_34726700
Isoform_25494_4	chr11	+	178	1	Intergenic	novelGene_1457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAACTAGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	34939051	34939229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_34939100_34939200
Isoform_25496_4	chr11	+	2160	1	Genic_Genomic	ENSMUSG00000018846.9	novel	NA	NA	NA	NA	-15	-19657	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35660295	35662455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_35660300_35662500
Isoform_25497_13	chr11	+	2048	1	NIC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	99	-19655	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35660409	35662457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_35660400_35662500
Isoform_25498_3	chr11	+	5111	2	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	16650	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTCCTGCTTGTTT	NA	False	NA	13	True	AATAAA	-15	NA	35676960	35682110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_35678873_35678911
Isoform_2550_39	chr10	-	7110	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-156	-3929	-156	-5	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGGAGTGTCTGTCT	NA	False	NA	-9	True	AATAAA	-18	NA	67972612	67928354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
Isoform_25500_3	chr11	+	4501	2	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	17258	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTGTCTCCTGCTTGT	NA	False	NA	11	True	AATAAA	-13	NA	35677568	35682108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_35678873_35678911
Isoform_25502_7	chr11	+	4054	2	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	17705	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTGTCTCCTGCTTGT	NA	False	NA	11	True	AATAAA	-13	NA	35678015	35682108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_35678873_35678911
Isoform_2551_43	chr10	-	6919	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	34	-3928	34	-6	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGGGAGTGTCTGTC	NA	False	NA	-10	True	AATAAA	-17	NA	67972422	67928355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
Isoform_25510_5	chr11	+	179	1	Intergenic	novelGene_1458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAAATGTTGAGTTTG	NA	False	NA	NA	False	NA	NA	NA	36946304	36946483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_36946300_36946500
Isoform_25512_3	chr11	-	177	1	Intergenic	novelGene_1459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	38233012	38232835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_38232800_38233000
Isoform_25514_1249	chr11	-	1335	1	FSM	ENSMUSG00000082087.5	ENSMUST00000122180.2	951	1	-32	-352	-32	352	mono-exon	FALSE	NA	NA	NA	NA	NA	1249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTGTGAAAAAAAAAAAAGA	5824	False	NA	NA	False	AATAAA	-5	NA	40564715	40563380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_40563400_40564700
Isoform_25518_7	chr11	+	205	1	Intergenic	novelGene_1460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTCTAAGCTTGAAATG	NA	False	NA	NA	False	AAAAAG	-7	NA	40594038	40594243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_40594000_40594200
Isoform_2553_4	chr10	-	7240	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-286	-3929	-286	-5	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGGAGTGTCTGTCT	NA	False	NA	-9	True	AATAAA	-18	NA	67972742	67928354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
Isoform_25536_35	chr11	+	167	1	Intergenic	novelGene_1461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTAAAAAAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	40748595	40748762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_40748600_40748800
Isoform_25537_3	chr11	+	1017	1	NIC	ENSMUSG00000086475.2	novel	375	3	NA	NA	240	-1003	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAACAGTATTA	NA	False	NA	NA	False	NA	NA	NA	41109903	41110920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_41109900_41110900
Isoform_25541_103	chr2	+	156	1	Intergenic	novelGene_6569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	130316538	130316694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_130316500_130316700
Isoform_25547_79	chr11	+	177	1	Intergenic	novelGene_1463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAATCAATTTT	NA	False	NA	NA	False	NA	NA	NA	43356983	43357160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_43357000_43357200
Isoform_25548_4	chr11	-	193	1	Intergenic	novelGene_1464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTATTAAAAAAGACAGTT	NA	False	NA	NA	False	NA	NA	NA	43357419	43357226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_43357200_43357400
Isoform_25549_6	chr11	+	176	1	Intergenic	novelGene_1465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGATTTATTTACT	NA	False	NA	NA	False	NA	NA	NA	43560670	43560846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_43560700_43560800
Isoform_2555_58	chr10	-	7557	10	FSM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	21	3	2	-3	multi-exon	TRUE	canonical	3	31	junction_9	46.8506953451172	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGAGTGTCTGTCTCT	5347	False	NA	-7	True	AATAAA	-20	NA	68114549	67928352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
Isoform_25551_106	chr11	+	198	1	Intergenic	novelGene_1466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTCTGAGCCATCTCT	3182	False	NA	NA	False	NA	NA	NA	43601860	43602058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_43601900_43602100
Isoform_25555_12	chr11	+	156	1	Intergenic	novelGene_1467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAAACTATTAA	NA	False	NA	NA	False	NA	NA	NA	44355702	44355858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_44355700_44355900
Isoform_25557_7	chr11	-	253	1	Intergenic	novelGene_1468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTTGCTTTTTGTTT	5762	False	NA	NA	False	NA	NA	NA	44490540	44490287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_44490300_44490500
Isoform_25559_10	chr11	-	179	1	Intergenic	novelGene_1469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACCCT	1740	False	NA	NA	False	NA	NA	NA	44494562	44494383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_44494400_44494600
Isoform_25560_260	chr11	-	182	1	Intergenic	novelGene_1470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGAAAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	44639134	44638952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_44639000_44639100
Isoform_25561_78	chr4	-	180	1	Intergenic	novelGene_8106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139267862	139267682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_139267700_139267900
Isoform_25563_22	chr11	+	177	1	Intergenic	novelGene_1471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45768724	45768901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_45768700_45768900
Isoform_25566_3	chr11	+	191	1	Intergenic	novelGene_1472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATCAC	NA	False	NA	NA	False	AATAAA	-41	NA	45810194	45810385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_45810200_45810400
Isoform_25568_23	chr11	+	156	1	Intergenic	novelGene_1473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	45950105	45950261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_45950100_45950300
Isoform_25593_24	chr11	+	173	1	Intergenic	novelGene_1309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAACC	9735	False	NA	NA	False	NA	NA	NA	4276405	4276578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4276400_4276600
Isoform_25595_8	chr11	+	1489	1	Intergenic	novelGene_1474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	1547	False	NA	NA	False	NA	NA	NA	46126554	46128043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_46126600_46128000
Isoform_25596_5	chr11	-	177	1	Intergenic	novelGene_1475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATCTT	5285	False	NA	NA	False	NA	NA	NA	46190774	46190597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_46190600_46190800
Isoform_25598_292	chr11	-	171	1	Intergenic	novelGene_1476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46300002	46299831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_46299800_46300000
Isoform_25601_11	chr11	-	182	1	Intergenic	novelGene_1478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	46406326	46406144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_46406100_46406300
Isoform_25607_14	chr11	-	181	1	Intergenic	novelGene_1479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46785187	46785006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_46785000_46785200
Isoform_25608_9	chr11	-	172	1	Intergenic	novelGene_1480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAATCACCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	48573934	48573762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_48573800_48573900
Isoform_25609_8	chr11	-	177	1	Intergenic	novelGene_1481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGCTTCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48621843	48621666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_48621700_48621800
Isoform_25610_41	chr11	+	247	1	Intergenic	novelGene_1482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	ATTAAA	-28	NA	48664790	48665037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_48664800_48665000
Isoform_25612_6	chr11	+	161	1	Intergenic	novelGene_1483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48684498	48684659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_48684500_48684700
Isoform_25614_10	chr11	-	959	1	FSM	ENSMUSG00000078154.4	ENSMUST00000104959.2	1310	1	351	0	351	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGTGTAAGAAGGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	48717131	48716172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_48716200_48717100
Isoform_25619_17	chr11	-	198	1	ISM	ENSMUSG00000046879.8	ENSMUST00000049519.4	2259	3	5838	94	5838	-90	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAGAAATTTTGT	NA	False	NA	NA	False	NA	NA	NA	48756363	48756165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_48756200_48756400
Isoform_25621_4	chr11	-	171	1	Intergenic	novelGene_1484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGGGAATAGATTGTT	NA	False	NA	NA	False	NA	NA	NA	48766441	48766270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_48766300_48766400
Isoform_25623_39	chr11	-	177	1	Intergenic	novelGene_1485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAATGAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	48853508	48853331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_48853300_48853500
Isoform_25626_6	chr11	+	5167	3	NNC	ENSMUSG00000046311.14	novel	2992	4	NA	NA	-2	-4893	intron_retention	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCTTCTTTAGCCTG	1378	False	NA	NA	False	NA	NA	NA	49094330	49099570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_49095094_49095138_49096741_49096768
Isoform_25632_3	chr11	+	785	1	Intergenic	novelGene_1486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	49342586	49343371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_49342600_49343400
Isoform_25633_7	chr2	+	706	1	Intergenic	novelGene_6596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTTAGCTCCGTTTC	7539	False	NA	NA	False	NA	NA	NA	143997561	143998267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_143997600_143998300
Isoform_25634_4	chr11	+	331	1	Intergenic	novelGene_1487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	49343040	49343371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_49343000_49343400
Isoform_25637_3	chr11	+	172	1	Intergenic	novelGene_1488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAACACACACACACAC	NA	False	NA	NA	False	NA	NA	NA	49539744	49539916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_49539700_49539900
Isoform_25639_4	chr11	-	173	1	Intergenic	novelGene_1489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGATGACA	NA	False	NA	NA	False	NA	NA	NA	49568833	49568660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_49568700_49568800
Isoform_25640_2314	chr11	-	464	1	FSM	ENSMUSG00000083061.2	ENSMUST00000118307.2	348	1	-70	-46	-70	46	mono-exon	FALSE	NA	NA	NA	NA	NA	2314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAATTAA	NA	False	NA	NA	False	AATAAA	-23	NA	49569954	49569490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_49569500_49570000
Isoform_25645_176	chr7	+	177	1	Intergenic	novelGene_9916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTTGTTTT	4889	False	NA	NA	False	NA	NA	NA	28125417	28125594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_28125400_28125600
Isoform_25646_5	chr11	-	174	1	Intergenic	novelGene_1490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTCTTTAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	49579375	49579201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_49579200_49579400
Isoform_25647_6	chr11	+	159	1	Intergenic	novelGene_1491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGACCTATCGC	NA	False	NA	NA	False	NA	NA	NA	49590886	49591045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_49590900_49591000
Isoform_25648_3	chr11	+	1008	1	Antisense	novelGene_ENSMUSG00000020362.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGTCTTGATCTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	49602956	49603964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_49603000_49604000
Isoform_25650_8	chr11	+	170	1	Intergenic	novelGene_1310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAATAAA	9045	False	NA	NA	False	NA	NA	NA	4325207	4325377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4325200_4325400
Isoform_25653_4	chr11	+	1391	1	Intergenic	novelGene_1492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAACAAAGAG	NA	False	NA	NA	False	NA	NA	NA	49734210	49735601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_49734200_49735600
Isoform_25654_7	chr11	-	175	1	Intergenic	novelGene_1493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAAATGCCTG	NA	False	NA	NA	False	NA	NA	NA	49930451	49930276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_49930300_49930500
Isoform_25655_3	chr11	-	177	1	Intergenic	novelGene_1494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49974911	49974734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_49974700_49974900
Isoform_25657_10	chr11	+	1981	1	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	9	-7067	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50022237	50024218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50022200_50024200
Isoform_25658_8	chr11	+	191	1	Intergenic	novelGene_1495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGAAGCAGTGGACAG	NA	False	NA	NA	False	NA	NA	NA	50037636	50037827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_50037600_50037800
Isoform_25659_8	chr4	+	179	1	Intergenic	novelGene_7697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATCAATCTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101859177	101859356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_101859200_101859400
Isoform_25660_18	chr16	+	181	1	Intergenic	novelGene_4293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10975822	10976003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_10975800_10976000
Isoform_25661_3	chr11	+	2984	2	Antisense	novelGene_ENSMUSG00000020419.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAGAACAA	NA	False	NA	NA	False	NA	NA	NA	4336877	4339889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_4338593_4338620
Isoform_25662_3	chr11	+	2756	2	Antisense	novelGene_ENSMUSG00000020419.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAGAACAA	NA	False	NA	NA	False	NA	NA	NA	4337105	4339889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_4338593_4338620
Isoform_25664_11	chr11	+	180	1	Intergenic	novelGene_1497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGGGGAGGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	50104930	50105110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_50104900_50105100
Isoform_25665_5	chr11	+	3143	1	NIC	ENSMUSG00000097887.3	novel	611	2	NA	NA	-4	-23234	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8234	False	NA	NA	False	NA	NA	NA	50127834	50130977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50127800_50131000
Isoform_25669_4	chr11	-	173	1	Intergenic	novelGene_1498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	50165501	50165328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_50165300_50165500
Isoform_25697_6	chr11	-	928	1	Antisense	novelGene_ENSMUSG00000050087.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAAAAAGAGA	2363	False	NA	NA	False	NA	NA	NA	50250496	50249568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_50249600_50250500
Isoform_25698_3	chr11	-	175	1	Intergenic	novelGene_1499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGAGGTGTTAA	565	False	NA	NA	False	NA	NA	NA	50252294	50252119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_50252100_50252300
Isoform_25699_3	chr11	+	552	1	NIC	ENSMUSG00000007850.17	novel	2427	15	NA	NA	0	-2649	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAAAAAAACAA	NA	False	NA	NA	False	AAAAAG	-12	NA	50267816	50268368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_50267800_50268400
Isoform_25705_27	chr11	+	208	1	Intergenic	novelGene_1500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATCTTTGGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	50286947	50287155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_50286900_50287200
Isoform_25706_7	chr11	+	180	1	Intergenic	novelGene_1501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAGAAAGAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	50690592	50690772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_50690600_50690800
Isoform_25707_3	chr11	-	607	1	NIC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	4	-9565	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	TATAAA	-17	NA	50806988	50806381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_50806400_50807000
Isoform_25708_4	chr11	+	176	1	Intergenic	novelGene_1502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGGTATTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	50824763	50824939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_50824800_50824900
Isoform_25709_3	chr11	-	1075	1	Genic_Genomic	ENSMUSG00000086646.8	novel	NA	NA	NA	NA	-7	-29100	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAGAAAAAAATTCTG	NA	False	NA	NA	False	NA	NA	NA	51111252	51110177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_51110200_51111300
Isoform_25711_10	chr11	-	2105	1	NIC	ENSMUSG00000020419.12	novel	1915	12	NA	NA	-9	-11673	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4391091	4388986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_4389000_4391100
Isoform_25712_5	chr11	-	2227	1	Genic_Genomic	ENSMUSG00000020419.12	novel	NA	NA	NA	NA	-110	-11675	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4391215	4388988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_4389000_4391200
Isoform_25713_10	chr11	-	355	1	Intergenic	novelGene_1503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51129596	51129241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_51129200_51129600
Isoform_25714_6	chr11	+	234	1	Intergenic	novelGene_1504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGCTCTAGGTTGGTCT	NA	False	NA	NA	False	AATAAA	-33	NA	51168439	51168673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_51168400_51168700
Isoform_25715_78	chr11	-	162	1	Antisense	novelGene_ENSMUSG00000020359.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTTTAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	51485698	51485536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_51485500_51485700
Isoform_25725_14	chr11	+	160	1	Intergenic	novelGene_1505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGAAAAAAAAAATGGGG	NA	False	NA	NA	False	NA	NA	NA	51501004	51501164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_51501000_51501200
Isoform_25726_77	chr11	-	177	1	Intergenic	novelGene_1311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	7004	False	NA	NA	False	NA	NA	NA	4420280	4420103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_4420100_4420300
Isoform_25729_7	chr11	+	158	1	Intergenic	novelGene_1506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	51553207	51553365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_51553200_51553400
Isoform_25730_4	chr11	-	304	1	Intergenic	novelGene_1507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51555448	51555144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_51555100_51555400
Isoform_25731_36	chr11	-	177	1	Intergenic	novelGene_1508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTTGCCGGGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	51555448	51555271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_51555300_51555400
Isoform_25732_4	chr11	-	174	1	Intergenic	novelGene_1509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAATGTGCATTT	NA	False	NA	NA	False	NA	NA	NA	51563556	51563382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_51563400_51563600
Isoform_25733_7	chr11	+	181	1	Intergenic	novelGene_1510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAACACACAA	NA	False	NA	NA	False	NA	NA	NA	51574254	51574435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_51574300_51574400
Isoform_25737_3	chr11	-	205	1	Intergenic	novelGene_1511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGTGTCTGAAGA	8193	False	NA	NA	False	NA	NA	NA	51594437	51594232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_51594200_51594400
Isoform_25738_6	chr11	+	1597	1	Antisense	novelGene_ENSMUSG00000036391.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGCACGGAGTAAGCTC	NA	False	NA	NA	False	NA	NA	NA	51603503	51605100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_51603500_51605100
Isoform_25739_3	chr11	-	178	1	Intergenic	novelGene_1512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAAGAGGAAAG	6907	False	NA	NA	False	NA	NA	NA	51608840	51608662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_51608700_51608800
Isoform_25740_9	chr11	-	177	1	ISM	ENSMUSG00000036391.17	ENSMUST00000147255.2	2744	8	27910	7	26960	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	51620078	51619901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_51619900_51620100
Isoform_25741_3	chr11	+	175	1	Intergenic	novelGene_1513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAACATCTAT	5264	False	NA	NA	False	NA	NA	NA	51649590	51649765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_51649600_51649800
Isoform_25743_13	chr11	-	219	1	Intergenic	novelGene_1514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTTAGAAATGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	51719686	51719467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_51719500_51719700
Isoform_25744_5	chr11	+	167	1	Intergenic	novelGene_1515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATTATTTTCAG	1409	False	NA	NA	False	NA	NA	NA	51757351	51757518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_51757400_51757500
Isoform_25745_37	chr11	+	175	1	Intergenic	novelGene_1516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAGAAAGAAAT	2739	False	NA	NA	False	NA	NA	NA	51758681	51758856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_51758700_51758900
Isoform_25746_13	chr11	-	174	1	Intergenic	novelGene_1517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	6499	False	NA	NA	False	NA	NA	NA	51851516	51851342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_51851300_51851500
Isoform_25750_3	chr11	+	180	1	Intergenic	novelGene_1518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAAATAATTC	2209	False	NA	NA	False	NA	NA	NA	51878306	51878486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_51878300_51878500
Isoform_25753_28	chr11	-	167	1	Intergenic	novelGene_1312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2931	False	NA	NA	False	NA	NA	NA	4461366	4461199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_4461200_4461400
Isoform_25757_14	chr11	+	179	1	Intergenic	novelGene_1313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAATATGTTCA	NA	False	NA	NA	False	NA	NA	NA	4468439	4468618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4468400_4468600
Isoform_25760_53	chr2	+	176	1	Intergenic	novelGene_6677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATAGC	6270	False	NA	NA	False	NA	NA	NA	155574446	155574622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_155574400_155574600
Isoform_25762_12	chr11	-	160	1	Intergenic	novelGene_1519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	52107682	52107522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_52107500_52107700
Isoform_25767_10	chr11	+	179	1	Intergenic	novelGene_1314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAACCCAAAAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	4475497	4475676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4475500_4475700
Isoform_25771_6	chr11	-	190	1	Intergenic	novelGene_1520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATGGGTATGTACCATC	9500	False	NA	NA	False	NA	NA	NA	52247574	52247384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_52247400_52247600
Isoform_25772_5	chr11	-	858	1	Intergenic	novelGene_1521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	9410	False	NA	NA	False	NA	NA	NA	52249483	52248625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_52248600_52249500
Isoform_25773_6	chr11	-	5046	1	Intergenic	novelGene_1522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTTACTGCTGACAGC	6284	False	NA	NA	False	NA	NA	NA	52258711	52253665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_52253700_52258700
Isoform_25774_10	chr11	-	178	1	Intergenic	novelGene_1523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAGAAGCAT	9030	False	NA	NA	False	NA	NA	NA	52274318	52274140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_52274100_52274300
Isoform_25775_10	chr11	-	177	1	Intergenic	novelGene_1524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGTAAATTAAAAAAAAAA	7221	False	NA	NA	False	NA	NA	NA	52277183	52277006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_52277000_52277200
Isoform_25785_11	chr11	+	175	1	Intergenic	novelGene_1525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	989	False	NA	NA	False	NA	NA	NA	52283685	52283860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_52283700_52283900
Isoform_25786_38	chr11	-	180	1	Intergenic	novelGene_1526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	9950	False	NA	NA	False	NA	NA	NA	52296767	52296587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_52296600_52296800
Isoform_25789_20	chr11	-	176	1	Intergenic	novelGene_1527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTTTTTAAAAAAA	3292	False	NA	NA	False	NA	NA	NA	52332794	52332618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_52332600_52332800
Isoform_25791_5	chr11	-	3431	1	FSM	ENSMUSG00000081297.2	ENSMUST00000120089.2	596	1	-1641	-1194	-1641	1194	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTGTTGTAGTTTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	52371571	52368140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_52368100_52371600
Isoform_25792_91	chr11	-	194	1	Intergenic	novelGene_1528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACTAAGA	NA	False	NA	NA	False	NA	NA	NA	52434904	52434710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_52434700_52434900
Isoform_25793_6	chr11	+	187	1	Intergenic	novelGene_1315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4517525	4517712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4517500_4517700
Isoform_25795_5	chr11	-	250	1	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	40393	1	7177	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTTCTTAATTTTCTT	NA	False	NA	-2	True	AATAAA	-21	NA	53150891	53150641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_53150600_53150900
Isoform_25797_19	chr11	+	2640	1	Antisense	novelGene_ENSMUSG00000020361.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	53172587	53175227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_53172600_53175200
Isoform_25799_6	chr11	+	2326	1	Intergenic	novelGene_1529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	53185515	53187841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_53185500_53187800
Isoform_25800_67	chr11	-	1066	1	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-1	-35100	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53191239	53190173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_53190200_53191200
Isoform_25803_4	chr11	+	176	1	Intergenic	novelGene_1530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACTTA	6478	False	NA	NA	False	NA	NA	NA	53194086	53194262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_53194100_53194300
Isoform_25804_12	chr11	-	221	1	Intergenic	novelGene_1531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGGAGTTCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	53201427	53201206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53201200_53201400
Isoform_25809_84	chr11	-	176	1	Intergenic	novelGene_1532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTAAGTT	NA	False	NA	NA	False	NA	NA	NA	53217790	53217614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53217600_53217800
Isoform_25810_25	chr11	-	218	1	Intergenic	novelGene_1533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTAGATTGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	53229125	53228907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53228900_53229100
Isoform_25811_3	chr11	-	178	1	Intergenic	novelGene_1534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCACTGT	NA	False	NA	NA	False	NA	NA	NA	53233210	53233032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53233000_53233200
Isoform_25812_5	chr11	+	166	1	Intergenic	novelGene_1535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAACAGCAATCATACTTA	NA	False	NA	NA	False	NA	NA	NA	53237525	53237691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_53237500_53237700
Isoform_25813_15	chr11	+	238	1	Intergenic	novelGene_1536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAATGAATCACTAACTT	NA	False	NA	NA	False	NA	NA	NA	53238565	53238803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_53238600_53238800
Isoform_25814_39	chr11	-	198	1	Intergenic	novelGene_1537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	53244518	53244320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53244300_53244500
Isoform_25816_7	chr11	-	160	1	Intergenic	novelGene_1538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAACAAA	7981	False	NA	NA	False	NA	NA	NA	53247653	53247493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53247500_53247700
Isoform_25817_22	chr11	-	175	1	Intergenic	novelGene_1539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAACAAAACAAAA	2680	False	NA	NA	False	NA	NA	NA	53255070	53254895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53254900_53255100
Isoform_25819_270	chr11	-	175	1	Intergenic	novelGene_1540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2437	False	NA	NA	False	NA	NA	NA	53269586	53269411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53269400_53269600
Isoform_2583_1316	chr10	-	1194	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	24	3157	-4	21	multi-exon	FALSE	canonical	3	2056	junction_1	102.156542539739	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCACTGTGGTGGCTGTT	NA	False	NA	-7	True	AATATA	-18	NA	69188744	69174132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
Isoform_2584_202	chr10	-	1225	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	-6	3156	-6	22	multi-exon	TRUE	canonical	3	2056	junction_1	102.156542539739	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGTGGTGGCTGTTA	NA	False	NA	-6	True	AATATA	-19	NA	69188774	69174131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
Isoform_25847_46	chr11	-	1353	1	NIC	ENSMUSG00000044894.15	novel	1521	2	NA	NA	28	-494	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	2975	False	NA	NA	False	NA	NA	NA	53321626	53320273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_53320300_53321600
Isoform_25848_9	chr11	-	172	1	Intergenic	novelGene_1541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	53325616	53325444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53325400_53325600
Isoform_25849_3	chr11	-	2858	1	FSM	ENSMUSG00000044352.7	ENSMUST00000104955.4	3702	1	90	754	90	-754	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAACCTCAAAGT	NA	False	NA	NA	False	NA	NA	NA	53371011	53368153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_53368200_53371000
Isoform_25858_28	chr11	-	269	1	Intergenic	novelGene_1543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGATGTTTTTATACCTT	NA	False	NA	NA	False	NA	NA	NA	53572295	53572026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53572000_53572300
Isoform_25860_16	chr11	-	176	1	Intergenic	novelGene_1544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAACAGTCTT	8418	False	NA	NA	False	NA	NA	NA	53610245	53610069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53610100_53610200
Isoform_25861_4	chr11	-	180	1	Intergenic	novelGene_1317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAATAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	4566797	4566617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_4566600_4566800
Isoform_25863_12	chr11	+	175	1	Intergenic	novelGene_1545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	53657175	53657350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_53657200_53657400
Isoform_25867_21	chr11	+	352	1	Intergenic	novelGene_1547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAACAAAGTCTGGGG	NA	False	NA	NA	False	NA	NA	NA	53752061	53752413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_53752100_53752400
Isoform_25871_6	chr11	-	193	1	Intergenic	novelGene_1548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTATTTATTTATATCA	NA	False	NA	NA	False	NA	NA	NA	54288197	54288004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_54288000_54288200
Isoform_25873_4	chr11	-	170	1	Intergenic	novelGene_1549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAAAAAAAAGAATCG	NA	False	NA	NA	False	NA	NA	NA	54398004	54397834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_54397800_54398000
Isoform_25877_4	chr11	-	245	1	Intergenic	novelGene_1550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	TTTAAA	-40	NA	54413480	54413235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_54413200_54413500
Isoform_25879_7	chr11	+	4535	1	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	-25634	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54413716	54418251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_54413700_54418300
Isoform_25889_4	chr11	+	175	1	Intergenic	novelGene_1551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54734779	54734954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_54734800_54735000
Isoform_25890_25	chr11	+	153	1	Intergenic	novelGene_1552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	54734993	54735146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_54735000_54735100
Isoform_25893_31	chr11	-	170	1	Intergenic	novelGene_1553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTAATCCATATTTC	NA	False	NA	NA	False	NA	NA	NA	54749638	54749468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_54749500_54749600
Isoform_25894_3	chr11	+	707	1	Antisense	novelGene_ENSMUSG00000020268.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCAAAAAACAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	54751621	54752328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_54751600_54752300
Isoform_25905_27	chr11	+	157	1	Intergenic	novelGene_1554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	6979	False	NA	NA	False	NA	NA	NA	54873415	54873572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_54873400_54873600
Isoform_25906_13	chr11	+	173	1	Intergenic	novelGene_1318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGACAAG	NA	False	NA	NA	False	NA	NA	NA	4627776	4627949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4627800_4627900
Isoform_25912_4	chr11	+	198	1	Intergenic	novelGene_1555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCTGTGCACATTTTCT	NA	False	NA	NA	False	NA	NA	NA	55012848	55013046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_55012800_55013000
Isoform_25925_32	chr11	-	173	1	Intergenic	novelGene_1556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	55366436	55366263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_55366300_55366400
Isoform_25926_46	chr11	-	206	1	Intergenic	novelGene_1557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAAACTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	55369456	55369250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_55369200_55369500
Isoform_25927_537	chr11	+	176	1	Intergenic	novelGene_1558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	537	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGAGTGCTA	NA	False	NA	NA	False	NA	NA	NA	55374215	55374391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_55374200_55374400
Isoform_25928_4	chr11	-	1081	1	Intergenic	novelGene_1559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACCACA	7445	False	NA	NA	False	NA	NA	NA	55388476	55387395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_55387400_55388500
Isoform_2595_4	chr10	-	3388	22	FSM	ENSMUSG00000014329.15	ENSMUST00000014473.6	3231	22	-156	-1	-146	1	multi-exon	FALSE	canonical	1	1	junction_2	4.79370335301786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70995676	70760930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_70761209_70763544_70763625_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
Isoform_25950_7	chr11	+	3330	1	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	31824	0	31791	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAATTCTCTTTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	55392334	55395664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_55392300_55395700
Isoform_25956_15	chr11	-	178	1	Intergenic	novelGene_1560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAGAAAAGAAAA	21	False	NA	NA	False	NA	NA	NA	55419888	55419710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_55419700_55419900
Isoform_25958_7	chr11	-	177	1	Intergenic	novelGene_1561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	55437545	55437368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_55437400_55437500
Isoform_25959_57	chr11	+	200	1	Intergenic	novelGene_1319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGTAGTTTGCAAAAA	7713	False	NA	NA	False	NA	NA	NA	4645474	4645674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4645500_4645700
Isoform_25961_5	chr11	+	764	1	NIC	ENSMUSG00000020522.14	novel	4827	3	NA	NA	1	-9638	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57409513	57410277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_57409500_57410300
Isoform_25964_4	chr11	+	1154	5	NNC	ENSMUSG00000020522.14	novel	4827	3	NA	NA	8986	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATTTAAAAATTCAGAGT	NA	False	NA	3	True	AATAAA	-4	NA	57422775	57424625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_57423302_57423538_57423550_57423734_57423833_57423997_57424033_57424141
Isoform_25965_6	chr11	-	417	1	Intergenic	novelGene_1562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57434163	57433746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_57433700_57434200
Isoform_25966_10	chr11	+	175	1	Intergenic	novelGene_1320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4648698	4648873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4648700_4648900
Isoform_25968_4553	chr11	-	5284	1	Intergenic	novelGene_1563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4553	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	57450919	57445635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_57445600_57450900
Isoform_2598_7	chr10	-	3314	21	FSM	ENSMUSG00000014329.15	ENSMUST00000143791.8	5431	21	-153	2270	-153	0	multi-exon	FALSE	canonical	1	4	junction_1	4.36205226928793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70995683	70760931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_70761209_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
Isoform_2599_3	chr10	-	2201	9	ISM	ENSMUSG00000014329.15	ENSMUST00000014473.6	3231	22	-152	27503	-142	-18103	5prime_fragment	FALSE	canonical	2	6	junction_4	4.63006479436303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCTCAGCCGCCTTAG	NA	False	NA	NA	False	AATAAA	-15	NA	70995672	70788434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
Isoform_26029_4	chrX	-	586	1	Intergenic	novelGene_12171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTTGCCACAGTGGT	NA	False	NA	NA	False	NA	NA	NA	122061943	122061357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_122061400_122061900
Isoform_26033_30	chr11	-	174	1	Intergenic	novelGene_1564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAACACAAAAAACAC	7025	False	NA	NA	False	NA	NA	NA	57500106	57499932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_57499900_57500100
Isoform_26034_9	chr11	-	180	1	Intergenic	novelGene_1565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGTCAACTTTCTT	NA	False	NA	NA	False	NA	NA	NA	57534186	57534006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_57534000_57534200
Isoform_26035_28	chr11	-	176	1	Intergenic	novelGene_1566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAAGACAGT	NA	False	NA	NA	False	NA	NA	NA	57608948	57608772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_57608800_57608900
Isoform_26040_10	chr11	-	176	1	Intergenic	novelGene_1567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAACAACAATAACAA	6803	False	NA	NA	False	NA	NA	NA	57794670	57794494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_57794500_57794700
Isoform_26041_10	chr11	-	178	1	Intergenic	novelGene_1568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAAAGCTTTAGG	NA	False	NA	NA	False	NA	NA	NA	57809348	57809170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_57809200_57809300
Isoform_26042_43	chr11	+	176	1	Intergenic	novelGene_1569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAACTCA	2507	False	NA	NA	False	NA	NA	NA	57834220	57834396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_57834200_57834400
Isoform_26043_3	chr11	+	181	1	Intergenic	novelGene_1570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAGACAAGGGCTGGA	3151	False	NA	NA	False	NA	NA	NA	57834864	57835045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_57834900_57835000
Isoform_2605_80	chr10	-	3009	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	215	943	215	-943	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATCTGCTTTCCATGT	NA	False	NA	NA	False	AAAACA	-16	NA	71073895	71062236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
Isoform_2606_93	chr10	-	3903	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	262	2	262	-2	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACCTGTTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	71073848	71061295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
Isoform_26077_9	chr11	-	178	1	Intergenic	novelGene_1571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	57965657	57965479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_57965500_57965700
Isoform_26078_35	chr11	+	174	1	Intergenic	novelGene_1572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57967673	57967847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_57967700_57967800
Isoform_2608_10	chr10	-	3815	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	205	147	205	-147	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCATCAATTGTTTATCA	NA	False	NA	NA	False	NA	NA	NA	71073905	71061440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
Isoform_26080_5	chr11	-	201	1	Intergenic	novelGene_1573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTCTCTTTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	57979227	57979026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_57979000_57979200
Isoform_26082_117	chr11	-	171	1	Intergenic	novelGene_1574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAACTGTAGT	NA	False	NA	NA	False	NA	NA	NA	58039660	58039489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_58039500_58039700
Isoform_26084_63	chr11	-	177	1	Intergenic	novelGene_1575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATACCTT	NA	False	NA	NA	False	NA	NA	NA	58061546	58061369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_58061400_58061500
Isoform_26085_4	chr11	-	177	1	Intergenic	novelGene_1576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAACAAAAGA	1914	False	NA	NA	False	NA	NA	NA	58071127	58070950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_58071000_58071100
Isoform_26089_3	chr11	-	3128	1	FSM	ENSMUSG00000049755.15	ENSMUST00000185661.2	3125	1	-2	-1	-2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	58221167	58218039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_58218000_58221200
Isoform_26090_13	chr11	+	196	1	Intergenic	novelGene_1577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGACTCACTGTTCAA	NA	False	NA	NA	False	NA	NA	NA	58264065	58264261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_58264100_58264300
Isoform_26091_143	chr9	-	175	1	Intergenic	novelGene_11730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	114804563	114804388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_114804400_114804600
Isoform_2610_334	chr10	-	1427	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	266	2474	266	508	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTTTCTGAAATTATG	NA	False	NA	-12	True	AATAAA	-16	NA	71073844	71063767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
Isoform_26104_18	chr11	+	925	1	FSM	ENSMUSG00000078851.5	ENSMUST00000108817.5	2146	1	1	1220	1	-1220	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGAGTTTTGCTGGTT	NA	False	NA	9	True	TATAAA	-25	NA	58845511	58846436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_58845500_58846400
Isoform_26105_16	chr11	-	172	1	ISM	ENSMUSG00000085379.2	ENSMUST00000131221.2	3201	2	11729	402	11729	-402	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTAAAAAAGACAAGCCA	NA	False	NA	NA	False	NA	NA	NA	58857147	58856975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_58857000_58857100
Isoform_26107_3	chr11	-	1440	1	NIC	ENSMUSG00000085379.2	novel	3201	2	NA	NA	25	-10838	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTTATAAATAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	58868851	58867411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_58867400_58868900
Isoform_26111_3	chr11	+	173	1	Intergenic	novelGene_1578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGTAAAAGA	10013	False	NA	NA	False	NA	NA	NA	58992188	58992361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_58992200_58992400
Isoform_26112_10	chr11	+	171	1	Intergenic	novelGene_1579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	59033499	59033670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59033500_59033700
Isoform_26113_10	chr11	+	196	1	Intergenic	novelGene_1580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59083506	59083702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59083500_59083700
Isoform_26123_70	chr11	-	173	1	Intergenic	novelGene_1581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTATTTATTTTGA	9676	False	NA	-17	True	NA	NA	NA	59192049	59191876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_59191900_59192000
Isoform_26126_9	chr11	-	183	1	Intergenic	novelGene_1582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATGCCCCTAAAACC	NA	False	NA	NA	False	NA	NA	NA	59247137	59246954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_59247000_59247100
Isoform_26127_13	chr9	-	171	1	Intergenic	novelGene_11350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAACAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	60525482	60525311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_60525300_60525500
Isoform_26128_52	chr11	-	185	1	Intergenic	novelGene_1583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAAAGCAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	59277338	59277153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_59277200_59277300
Isoform_26129_6	chr11	+	174	1	Intergenic	novelGene_1584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAGTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59282517	59282691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59282500_59282700
Isoform_2613_9	chr10	-	1573	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	120	2474	120	508	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTTTCTGAAATTATG	NA	False	NA	-12	True	AATAAA	-16	NA	71073990	71063767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
Isoform_26130_3	chr11	+	176	1	Intergenic	novelGene_1585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATATTTAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	59291306	59291482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59291300_59291500
Isoform_26131_21	chr11	+	2338	1	Antisense	novelGene_ENSMUSG00000009894.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4115	False	NA	NA	False	NA	NA	NA	59311042	59313380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_59311000_59313400
Isoform_26133_6	chr11	+	164	1	Intergenic	novelGene_1321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATCTTAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	4761684	4761848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4761700_4761800
Isoform_26134_7	chr11	+	172	1	Intergenic	novelGene_1586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGTTAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	59366933	59367105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59366900_59367100
Isoform_26139_3	chr11	-	173	1	Antisense	novelGene_ENSMUSG00000072893.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAAAGTCAC	NA	False	NA	NA	False	NA	NA	NA	59399441	59399268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_59399300_59399400
Isoform_26140_3	chr11	+	176	1	Intergenic	novelGene_1587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	59402955	59403131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59403000_59403100
Isoform_26143_14	chr11	-	177	1	Intergenic	novelGene_1588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGAGCAAGTGGGGCTG	5157	False	NA	NA	False	NA	NA	NA	59444837	59444660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_59444700_59444800
Isoform_26148_3	chr11	+	2991	1	Antisense	novelGene_ENSMUSG00000019373.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59725746	59728737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_59725700_59728700
Isoform_26151_13	chr11	+	175	1	Intergenic	novelGene_1590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGACATCCAGTC	NA	False	NA	NA	False	NA	NA	NA	59912373	59912548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59912400_59912500
Isoform_26152_8	chr11	+	178	1	Intergenic	novelGene_1591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAGGAAAGAAAGAAAG	292	False	NA	NA	False	NA	NA	NA	59948527	59948705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59948500_59948700
Isoform_26153_6	chr11	+	202	1	Intergenic	novelGene_1592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGGCATTCCCTGTG	NA	False	NA	NA	False	NA	NA	NA	59958989	59959191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59959000_59959200
Isoform_26154_38	chr11	+	180	1	Intergenic	novelGene_1593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAGAGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	59969374	59969554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_59969400_59969600
Isoform_26158_1215	chr3	+	176	1	Intergenic	novelGene_7215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	9070	False	NA	NA	False	NA	NA	NA	96230231	96230407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_96230200_96230400
Isoform_26159_12	chr11	+	1452	1	Intergenic	novelGene_1594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	NA	False	NA	NA	False	NA	NA	NA	60237489	60238941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60237500_60238900
Isoform_26160_4	chr11	+	183	1	Intergenic	novelGene_1595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACCTATCCAGCCCT	NA	False	NA	NA	False	NA	NA	NA	60240397	60240580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60240400_60240600
Isoform_26163_5	chr11	+	177	1	Intergenic	novelGene_1596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60302268	60302445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60302300_60302400
Isoform_2617_43	chr10	-	1426	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	3	2	3	-2	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCTTGACTACTTAATG	NA	False	NA	-2	True	AATAAA	-16	NA	71121089	71090811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
Isoform_26178_3	chr11	-	2315	1	Antisense	novelGene_ENSMUSG00000042650.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	60428703	60426388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_60426400_60428700
Isoform_26179_3	chr11	-	2142	1	Antisense	novelGene_ENSMUSG00000042650.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGTCTCAGCACTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	60430039	60427897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_60427900_60430000
Isoform_2618_126	chr10	-	1383	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	46	2	2	-2	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCTTGACTACTTAATG	NA	False	NA	-2	True	AATAAA	-16	NA	71121046	71090811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
Isoform_26187_14	chr11	+	178	1	Intergenic	novelGene_1597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAGGCAGAGG	4092	False	NA	NA	False	NA	NA	NA	60458714	60458892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60458700_60458900
Isoform_26188_4	chr11	-	196	1	Intergenic	novelGene_1598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACTAAAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	60480650	60480454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_60480500_60480600
Isoform_26191_4	chr11	+	179	1	Intergenic	novelGene_1599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	60506382	60506561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60506400_60506600
Isoform_26199_26	chr11	+	3528	1	FSM	ENSMUSG00000049323.9	ENSMUST00000102667.5	3544	1	19	-3	18	3	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTCAATGGTCATTGA	NA	False	NA	NA	False	AATAAA	-19	NA	60668368	60671896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_60668400_60671900
Isoform_2620_4	chr10	-	1514	8	NNC	ENSMUSG00000019927.7	novel	1431	7	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	62.9936828708455	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCGTCTTGACTACTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	71121046	71090813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71099414_71099548_71120930
Isoform_26200_5	chr11	+	166	1	Intergenic	novelGene_1600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	60674120	60674286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60674100_60674300
Isoform_26205_19	chr11	+	204	1	Intergenic	novelGene_1601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTTTTTTTATATGAAA	NA	False	NA	NA	False	NA	NA	NA	60684217	60684421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60684200_60684400
Isoform_26208_8	chr11	+	177	1	Intergenic	novelGene_1602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAATAAAACAAAAC	71	False	NA	NA	False	NA	NA	NA	60704769	60704946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60704800_60704900
Isoform_26209_4	chr11	+	2735	2	NNC	ENSMUSG00000042569.14	novel	1553	7	NA	NA	-10	-24992	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	60721494	60724257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_60723878_60723905
Isoform_2621_4	chr10	-	1309	6	NIC	ENSMUSG00000019927.7	novel	1431	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	52.3702205456498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	False	NA	0	True	AATAAA	-18	NA	71121048	71090809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_71091705_71092444_71092539_71094030_71094137_71097913_71097946_71098028_71098093_71120930
Isoform_26211_48	chr11	+	202	1	Intergenic	novelGene_1603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGAGATTGGTT	3310	False	NA	NA	False	NA	NA	NA	60731801	60732003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60731800_60732000
Isoform_26217_210	chr11	+	171	1	Intergenic	novelGene_1604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAGCGAGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	60771903	60772074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60771900_60772100
Isoform_26218_51	chr11	+	176	1	Intergenic	novelGene_1605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	497	False	NA	NA	False	NA	NA	NA	60778079	60778255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_60778100_60778300
Isoform_26220_21	chr7	+	173	1	Intergenic	novelGene_10354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126229527	126229700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_126229500_126229700
Isoform_26228_9	chr11	-	167	1	Intergenic	novelGene_1606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8571	False	NA	NA	False	NA	NA	NA	60800288	60800121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_60800100_60800300
Isoform_2623_859	chr10	-	739	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	97	248	97	-248	multi-exon	FALSE	canonical	3	1606	junction_1	82	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGTACATGTACATT	1350	False	NA	-34	True	ATTAAA	-9	NA	71180687	71166557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71166957_71172043_71172250_71180553
Isoform_26230_12	chr11	+	2650	1	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	3	-7410	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAAAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	60822882	60825532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_60822900_60825500
Isoform_26238_4	chr11	+	185	1	Intergenic	novelGene_1608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	61006015	61006200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_61006000_61006200
Isoform_26239_6	chr11	-	176	1	Intergenic	novelGene_1609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACCG	NA	False	NA	NA	False	NA	NA	NA	61026184	61026008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_61026000_61026200
Isoform_2624_96	chr10	-	972	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	98	14	98	-14	multi-exon	FALSE	canonical	3	1606	junction_1	82	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGTGTTCATCTCTG	1351	False	NA	-7	True	AATAAA	-13	NA	71180686	71166323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71166957_71172043_71172250_71180553
Isoform_26248_371	chr11	-	173	1	Intergenic	novelGene_1322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4857184	4857011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_4857000_4857200
Isoform_26249_15	chr11	+	176	1	Intergenic	novelGene_1610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAACCTTTTA	NA	False	NA	NA	False	NA	NA	NA	61085915	61086091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_61085900_61086100
Isoform_26250_107	chr11	-	195	1	Intergenic	novelGene_1611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	463	False	NA	NA	False	NA	NA	NA	61205735	61205540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_61205500_61205700
Isoform_26253_47	chr11	-	223	1	Intergenic	novelGene_1613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	61394127	61393904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_61393900_61394100
Isoform_26258_5	chr11	-	176	1	Intergenic	novelGene_1614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61474066	61473890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_61473900_61474100
Isoform_26259_4	chr11	-	173	1	Intergenic	novelGene_1615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAAAGATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	61477387	61477214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_61477200_61477400
Isoform_2626_18	chr10	-	802	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	34	248	34	-248	multi-exon	FALSE	canonical	3	1606	junction_1	82	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGTACATGTACATT	1287	False	NA	-34	True	ATTAAA	-9	NA	71180750	71166557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_71166957_71172043_71172250_71180553
Isoform_26260_35	chr11	-	171	1	Intergenic	novelGene_1616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGACAGTGGAA	NA	False	NA	NA	False	NA	NA	NA	61676180	61676009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_61676000_61676200
Isoform_26262_31	chr11	+	198	1	Intergenic	novelGene_1617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCGTGCTTCCACTCTT	NA	False	NA	NA	False	NA	NA	NA	61726344	61726542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_61726300_61726500
Isoform_26263_79	chr11	-	176	1	Intergenic	novelGene_1618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	61728936	61728760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_61728800_61728900
Isoform_26264_18	chr11	+	180	1	Intergenic	novelGene_1619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCCTGCATTGAT	NA	False	NA	NA	False	NA	NA	NA	61831445	61831625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_61831400_61831600
Isoform_26267_9	chr11	-	710	1	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	23	-13419	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62172178	62171468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62171500_62172200
Isoform_26270_3	chr11	-	976	1	Genic_Genomic	ENSMUSG00000018501.18	novel	NA	NA	NA	NA	4601	781	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTCTCACTGCCTT	NA	False	NA	-11	True	ATTAAA	-41	NA	62207446	62206470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_62206500_62207400
Isoform_26273_70	chr11	+	177	1	Intergenic	novelGene_1620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62268248	62268425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_62268200_62268400
Isoform_26275_4	chr11	+	1228	1	Intergenic	novelGene_1621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62305919	62307147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_62305900_62307100
Isoform_26278_40	chr11	+	2630	1	Antisense	novelGene_ENSMUSG00000018501.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAATAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	62323233	62325863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_62323200_62325900
Isoform_2628_215	chr10	-	2908	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	55	537	-28	5	multi-exon	FALSE	canonical	3	66	junction_3	9.3893556754444	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTAGCACCCTTTGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	75353160	75342653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
Isoform_26281_21	chr11	+	2046	1	Genic_Genomic	ENSMUSG00000014245.9	novel	NA	NA	NA	NA	-1065	-52798	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGACCTTTTTTCCCAT	NA	False	NA	13	True	NA	NA	NA	62348220	62350266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_62348200_62350300
Isoform_26282_47	chr11	-	3854	1	Intergenic	novelGene_1622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCCAACAAGCAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	62358120	62354266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_62354300_62358100
Isoform_26283_3	chr11	+	166	1	Intergenic	novelGene_1623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	62358354	62358520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_62358400_62358500
Isoform_26285_8	chr11	-	175	1	Intergenic	novelGene_1624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAACAAGGGG	NA	False	NA	NA	False	NA	NA	NA	62399308	62399133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_62399100_62399300
Isoform_26286_5	chr11	+	886	1	NIC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53082	337	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62402515	62403401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_62402500_62403400
Isoform_26287_3	chr11	+	205	1	Intergenic	novelGene_1625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTTGAGAATTATTTTG	NA	False	NA	14	True	ATTAAA	-22	NA	62406660	62406865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_62406700_62406900
Isoform_26289_4	chr11	+	153	1	Intergenic	novelGene_1626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62410196	62410349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_62410200_62410300
Isoform_26290_3	chr11	-	402	1	Antisense	novelGene_ENSMUSG00000086636.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGTAAAAAAATAAAAA	2342	False	NA	NA	False	NA	NA	NA	62413976	62413574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_62413600_62414000
Isoform_26293_22	chr11	-	1252	1	NIC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	20	-3872	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTTAAAAAAAATGAAAT	8391	False	NA	NA	False	ATTAAA	-15	NA	62430067	62428815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_62428800_62430100
Isoform_26295_5	chr11	-	195	1	Intergenic	novelGene_1627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTAAAGTTGGGGG	2126	False	NA	NA	False	NA	NA	NA	62436332	62436137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_62436100_62436300
Isoform_2630_8	chr10	-	3013	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	-52	539	-52	3	multi-exon	FALSE	canonical	3	66	junction_3	9.3893556754444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTAGCACCCTTTGTC	NA	False	NA	-10	True	AATAAA	-14	NA	75353267	75342655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
Isoform_26302_3	chr5	-	2337	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	269	12	269	0	multi-exon	FALSE	canonical	3	916	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTTCATTTGTGTT	NA	False	NA	-12	True	AATAAA	-14	NA	125466809	125463040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_125465329_125466760
Isoform_26303_30	chr14	+	779	1	FSM	ENSMUSG00000044285.9	ENSMUST00000111388.5	685	1	79	-173	79	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCAAGAAGGTGGACTC	NA	False	NA	NA	False	AATAAA	-45	NA	46321663	46322442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_46321700_46322400
Isoform_26308_22	chr11	+	1930	1	FSM	ENSMUSG00000064437.4	ENSMUST00000082503.4	72	1	-202	-1656	-202	1656	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCCAGTGTTTTGGAT	NA	False	NA	NA	False	AATAAA	-17	NA	62493702	62495632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_62493700_62495600
Isoform_2631_13	chr10	-	2878	6	NIC	ENSMUSG00000033416.16	novel	2843	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	28.7026131214564	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGTAGCACCCTTTGT	NA	False	NA	-11	True	AATAAA	-13	NA	75353720	75342656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75353574
Isoform_26313_43	chr5	-	172	1	Intergenic	novelGene_9101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143091357	143091185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_143091200_143091400
Isoform_26314_6	chr11	-	178	1	Intergenic	novelGene_1628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATACATACATAA	6274	False	NA	NA	False	NA	NA	NA	62610862	62610684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_62610700_62610900
Isoform_26315_22	chr11	-	176	1	Intergenic	novelGene_1629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATCATAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	62664550	62664374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_62664400_62664600
Isoform_26317_5	chr11	+	336	1	Antisense	novelGene_ENSMUSG00000009079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAATCTGGTCGTCA	6999	False	NA	NA	False	TATAAA	-36	NA	5019689	5020025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_5019700_5020000
Isoform_26320_6	chr11	+	175	1	Intergenic	novelGene_1631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTGACAGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	62790020	62790195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_62790000_62790200
Isoform_26324_7	chr11	+	193	1	Intergenic	novelGene_1326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTCCTGTGTGGCCCTG	NA	False	NA	NA	False	NA	NA	NA	5026543	5026736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5026500_5026700
Isoform_26326_3	chr11	+	866	1	Antisense	novelGene_ENSMUSG00000033389.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	64893040	64893906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_64893000_64893900
Isoform_26327_3	chr11	+	176	1	Intergenic	novelGene_1632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAACAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64933645	64933821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_64933600_64933800
Isoform_26328_52	chr8	-	175	1	Intergenic	novelGene_10752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80509934	80509759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_80509800_80509900
Isoform_26329_4	chr11	+	1832	1	Intergenic	novelGene_1633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGACAGAGGCTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	65025508	65027340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_65025500_65027300
Isoform_2633_3	chr10	-	2977	7	NNC	ENSMUSG00000033416.16	novel	3500	6	NA	NA	-26	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	37.9502598439355	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTGGTAGCACCCTTT	NA	False	NA	-13	True	AATAAA	-11	NA	75353158	75342658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_75344804_75345425_75345668_75345865_75345958_75346745_75346822_75346954_75347121_75347905_75347991_75352987
Isoform_26334_21	chr11	+	4493	1	Intergenic	novelGene_1634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65044239	65048732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_65044200_65048700
Isoform_26335_25	chr11	+	178	1	Intergenic	novelGene_1635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCCATCAGGAAG	NA	False	NA	NA	False	NA	NA	NA	65295583	65295761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_65295600_65295800
Isoform_26338_11	chr11	-	720	1	Genic_Genomic	ENSMUSG00000033352.12	novel	NA	NA	NA	NA	-13	-68052	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAATCAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	65679136	65678416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_65678400_65679100
Isoform_26339_15	chr11	-	178	1	Intergenic	novelGene_1636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATTGGGAA	NA	False	NA	NA	False	NA	NA	NA	66215277	66215099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_66215100_66215300
Isoform_2634_4	chr10	-	3530	5	ISM	ENSMUSG00000033416.16	ENSMUST00000145890.8	2816	9	-55	155711	-30	3	5prime_fragment	FALSE	canonical	3	66	junction_2	10.4880884817015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTAGCACCCTTTGTC	NA	False	NA	-10	True	AATAAA	-14	NA	75353162	75342655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
Isoform_26340_101	chr11	+	177	1	Intergenic	novelGene_1637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	66412190	66412367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_66412200_66412400
Isoform_26342_9	chr11	-	177	1	Intergenic	novelGene_1638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGAATAGAACTTGG	NA	False	NA	NA	False	NA	NA	NA	66649402	66649225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_66649200_66649400
Isoform_26345_3	chr11	+	4531	1	NIC	ENSMUSG00000048070.5	novel	4200	2	NA	NA	12	-13353	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGAGGAAGGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	66802818	66807349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_66802800_66807300
Isoform_26346_687	chr11	+	178	1	Intergenic	novelGene_1639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	687	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAATAGATAT	NA	False	NA	NA	False	NA	NA	NA	66880710	66880888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_66880700_66880900
Isoform_26350_3	chr11	+	174	1	Intergenic	novelGene_1328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	5396	False	NA	NA	False	NA	NA	NA	5044554	5044728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5044600_5044700
Isoform_26351_5	chr11	-	177	1	Intergenic	novelGene_1640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	66965389	66965212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_66965200_66965400
Isoform_26353_16	chr11	+	176	1	Intergenic	novelGene_1641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGTATAGACCA	NA	False	NA	NA	False	NA	NA	NA	67191496	67191672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_67191500_67191700
Isoform_26354_42	chr11	-	181	1	Intergenic	novelGene_1642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATTTATTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	67405153	67404972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_67405000_67405200
Isoform_26356_49	chr11	-	186	1	Intergenic	novelGene_1643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACATTAGTAGAGATG	854	False	NA	NA	False	NA	NA	NA	67921320	67921134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_67921100_67921300
Isoform_2636_69	chr10	-	3192	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	-41	0	-24	0	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTCCCGTCTGTTTGT	NA	False	NA	-1	True	NA	NA	NA	75479866	75472539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_26360_13	chr11	-	181	1	Intergenic	novelGene_1645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	68072782	68072601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_68072600_68072800
Isoform_2637_140	chr10	-	3139	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	11	1	0	0	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTCCCGTCTGTTTG	NA	False	NA	-2	True	NA	NA	NA	75479814	75472540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_26376_7	chr11	+	189	1	Intergenic	novelGene_1646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68262270	68262459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_68262300_68262500
Isoform_26378_11	chr11	-	272	1	Intergenic	novelGene_1647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATGTGTCCTTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	68512379	68512107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_68512100_68512400
Isoform_26379_27	chr11	+	177	1	Intergenic	novelGene_1648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTATTTTCTTAT	441	False	NA	NA	False	NA	NA	NA	68540055	68540232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_68540100_68540200
Isoform_2638_20	chr10	-	3223	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	11	-83	0	83	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCTTCCTCTGCTCCT	NA	False	NA	-2	True	NA	NA	NA	75479814	75472456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_26380_6	chr11	+	153	1	Intergenic	novelGene_1649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTTCCTCATGTAGTCA	NA	False	NA	NA	False	NA	NA	NA	68550229	68550382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_68550200_68550400
Isoform_26383_9	chr11	-	200	1	Intergenic	novelGene_1650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATGAGCCGGGCGCGGT	NA	False	NA	NA	False	NA	NA	NA	68704862	68704662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_68704700_68704900
Isoform_26384_43	chr11	+	2663	1	Antisense	novelGene_ENSMUSG00000018736.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCTC	8730	False	NA	NA	False	NA	NA	NA	68713236	68715899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_68713200_68715900
Isoform_26385_10	chr11	+	170	1	Intergenic	novelGene_1651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGGCCTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	68722625	68722795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_68722600_68722800
Isoform_26386_180	chr2	-	206	1	Intergenic	novelGene_6288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTACATTTAATTCCGG	NA	False	NA	NA	False	NA	NA	NA	69752152	69751946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_69751900_69752200
Isoform_26388_10	chr11	+	174	1	Intergenic	novelGene_1329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAAAACAAGAAG	NA	False	NA	NA	False	NA	NA	NA	5072468	5072642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5072500_5072600
Isoform_26389_9	chr11	-	1153	1	NIC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	7	-12062	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCAAAAAAACCCCA	NA	False	NA	NA	False	AGTAAA	-8	NA	68743954	68742801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_68742800_68744000
Isoform_26390_4	chr11	-	176	1	Intergenic	novelGene_1653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGAGCAGGTGGAGG	NA	False	NA	NA	False	NA	NA	NA	68776786	68776610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_68776600_68776800
Isoform_26393_216	chr11	-	185	1	Intergenic	novelGene_1654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAAGAAAGAA	NA	False	NA	4	True	NA	NA	NA	68801929	68801744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_68801700_68801900
Isoform_26394_186	chr6	+	175	1	Intergenic	novelGene_9686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	134571185	134571360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_134571200_134571400
Isoform_26395_7	chr11	+	213	1	Intergenic	novelGene_1655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAATTCCACAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	68828006	68828219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_68828000_68828200
Isoform_26396_51	chr11	-	176	1	Intergenic	novelGene_1330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGAGAGAGAGG	2454	False	NA	NA	False	NA	NA	NA	5077343	5077167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_5077200_5077300
Isoform_26397_45	chr11	-	176	1	Intergenic	novelGene_1656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTTTATTAA	3127	False	NA	NA	False	NA	NA	NA	68868778	68868602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_68868600_68868800
Isoform_26398_4	chr11	+	351	1	Intergenic	novelGene_1657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATTCAGAGACAACTA	6145	False	NA	NA	False	NA	NA	NA	68870906	68871257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_68870900_68871300
Isoform_26406_6	chr11	-	3785	1	NIC	ENSMUSG00000034164.18	novel	1947	15	NA	NA	6	-13039	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAACAAG	7888	False	NA	NA	False	NA	NA	NA	5102231	5098446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_5098400_5102200
Isoform_26408_62	chr11	+	166	1	Intergenic	novelGene_1658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGACAAA	NA	False	NA	NA	False	NA	NA	NA	68899544	68899710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_68899500_68899700
Isoform_26410_5	chr11	-	2109	1	Intergenic	novelGene_1659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	CATAAA	-16	NA	68903298	68901189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_68901200_68903300
Isoform_26415_3	chr11	+	175	1	Intergenic	novelGene_1660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGACAGTTGTGATAAA	NA	False	NA	NA	False	NA	NA	NA	68933334	68933509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_68933300_68933500
Isoform_26417_16	chr11	+	1878	1	FSM	ENSMUSG00000045176.4	ENSMUST00000051888.4	1862	1	-17	1	-17	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGAGCCTGTTTTTTTG	NA	False	NA	16	True	ATTAAA	-16	NA	68950525	68952403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_68950500_68952400
Isoform_2642_10	chr10	-	3274	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	-45	-78	-28	78	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCCTGCTTCCTCTG	NA	False	NA	-7	True	NA	NA	NA	75479870	75472461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_26420_13	chr11	+	176	1	Intergenic	novelGene_1661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATATCACAATTAA	9050	False	NA	NA	False	NA	NA	NA	68966034	68966210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_68966000_68966200
Isoform_26421_121	chr4	+	198	1	Intergenic	novelGene_7494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAGAAGATTCCAA	NA	False	NA	NA	False	NA	NA	NA	40214113	40214311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_40214100_40214300
Isoform_26425_13	chr11	-	174	1	Intergenic	novelGene_1662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTCCCT	NA	False	NA	NA	False	NA	NA	NA	69073755	69073581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_69073600_69073800
Isoform_26426_69	chr11	-	176	1	ISM	ENSMUSG00000020891.12	ENSMUST00000021262.10	3226	14	13418	318	12959	-318	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	69075251	69075075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_69075100_69075300
Isoform_26428_5	chr11	+	172	1	Intergenic	novelGene_1663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCTTAAAAAGTA	9533	False	NA	NA	False	NA	NA	NA	69082959	69083131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69083000_69083100
Isoform_26429_3	chr11	+	307	1	Intergenic	novelGene_1664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTAACTCACAC	NA	False	NA	NA	False	NA	NA	NA	69175713	69176020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69175700_69176000
Isoform_26430_3	chr11	-	2260	1	Genic_Genomic	ENSMUSG00000032782.20	novel	NA	NA	NA	NA	-68	-6392	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	69214669	69212409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_69212400_69214700
Isoform_26432_7	chr11	+	1296	1	Intergenic	novelGene_1665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69264596	69265892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69264600_69265900
Isoform_26438_8	chr11	+	384	1	Antisense	novelGene_ENSMUSG00000018476.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	69289773	69290157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_69289800_69290200
Isoform_26439_4	chr11	+	1475	1	Antisense	novelGene_ENSMUSG00000041961.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5226089	5227564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_5226100_5227600
Isoform_26440_107	chr11	-	177	1	Intergenic	novelGene_1667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGTTAAGGAAA	9035	False	NA	NA	False	NA	NA	NA	69359036	69358859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_69358900_69359000
Isoform_26441_10	chr11	-	175	1	Intergenic	novelGene_1668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAG	9097	False	NA	NA	False	NA	NA	NA	69386590	69386415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_69386400_69386600
Isoform_26442_27	chr11	-	178	1	Intergenic	novelGene_1669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6525	False	NA	NA	False	NA	NA	NA	69413815	69413637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_69413600_69413800
Isoform_26443_208	chr11	+	177	1	Intergenic	novelGene_1670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9154	False	NA	NA	False	NA	NA	NA	69432490	69432667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69432500_69432700
Isoform_2645_12	chr10	-	2777	13	FSM	ENSMUSG00000006342.16	ENSMUST00000077610.6	2275	13	0	-502	0	-1	multi-exon	FALSE	canonical	1	3	junction_12	20.894410470001	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTTCCCGTCTGTT	NA	False	NA	-4	True	NA	NA	NA	75479814	75472542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75479707
Isoform_26452_3	chr11	+	172	1	Intergenic	novelGene_1671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACAAACTAGGA	NA	False	NA	NA	False	NA	NA	NA	69487373	69487545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69487400_69487500
Isoform_26455_34	chr11	+	177	1	Intergenic	novelGene_1673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGACAA	NA	False	NA	NA	False	NA	NA	NA	69516860	69517037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69516900_69517000
Isoform_26456_6	chr11	-	291	1	Intergenic	novelGene_1674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCGATCC	4860	False	NA	NA	False	NA	NA	NA	69518366	69518075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_69518100_69518400
Isoform_26457_6	chr11	-	1732	1	FSM	ENSMUSG00000080573.3	ENSMUST00000116923.3	120	1	42	-1654	42	1654	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-23	NA	69526303	69524571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_69524600_69526300
Isoform_26458_5	chr11	-	173	1	Intergenic	novelGene_1675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	69528992	69528819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_69528800_69529000
Isoform_2646_4	chr10	-	3270	14	NIC	ENSMUSG00000006342.16	novel	3151	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	52	junction_5	11.6608889610075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTCCCGTCTGTTT	NA	False	NA	-3	True	NA	NA	NA	75479816	75472541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_26464_5	chr11	+	393	1	Antisense	novelGene_ENSMUSG00000059796.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTGAAACAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-25	NA	69557767	69558160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_69557800_69558200
Isoform_26474_15	chr11	+	192	1	Intergenic	novelGene_1676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAATCAACACAAAGAAG	330	False	NA	NA	False	NA	NA	NA	69590003	69590195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69590000_69590200
Isoform_26476_233	chr11	+	227	1	Intergenic	novelGene_1677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCTGCATATCTTTTT	2951	False	NA	NA	False	NA	NA	NA	69594450	69594677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69594400_69594700
Isoform_26477_3	chr11	+	150	1	Intergenic	novelGene_1678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAATTCTAAAAAAGA	6912	False	NA	NA	False	NA	NA	NA	69608155	69608305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69608200_69608300
Isoform_26479_42	chr11	+	192	1	Intergenic	novelGene_1679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	69614380	69614572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69614400_69614600
Isoform_26483_3	chr11	+	157	1	Intergenic	novelGene_1680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATATTAAA	2023	False	NA	NA	False	NA	NA	NA	69644810	69644967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69644800_69645000
Isoform_26484_7	chr11	-	1635	1	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	4	-15374	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	69649459	69647824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_69647800_69649500
Isoform_26487_5	chr11	-	2071	1	Genic_Genomic	ENSMUSG00000089876.4	novel	NA	NA	NA	NA	-42	7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAAGTGTTTCCTTTGG	NA	False	NA	1	True	ATTAAA	-19	NA	69696492	69694421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_69694400_69696500
Isoform_2649_6	chr10	-	2325	9	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	35.6578795639898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTCTCTGCCTCTTTGC	NA	False	NA	-9	True	AATAAA	-8	NA	75503928	75481950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75503848
Isoform_26490_8	chr11	+	227	1	Intergenic	novelGene_1682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTTTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	69710168	69710395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69710200_69710400
Isoform_26491_9	chr11	+	1062	1	NIC	ENSMUSG00000070394.11	novel	421	4	NA	NA	-3	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTGGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69729377	69730439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_69729400_69730400
Isoform_26492_7	chr11	+	160	1	Intergenic	novelGene_1683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAAAACAACTAAAC	NA	False	NA	NA	False	NA	NA	NA	69731526	69731686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69731500_69731700
Isoform_26495_19	chr11	-	177	1	Intergenic	novelGene_1684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAACATTAA	NA	False	NA	NA	False	NA	NA	NA	69765013	69764836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_69764800_69765000
Isoform_26504_11	chr11	+	177	1	Intergenic	novelGene_1685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTTTTAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	69821622	69821799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69821600_69821800
Isoform_26506_87	chr16	+	177	1	Intergenic	novelGene_4539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAACTA	NA	False	NA	NA	False	NA	NA	NA	45527009	45527186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_45527000_45527200
Isoform_26508_6	chr11	+	1884	1	FSM	ENSMUSG00000065534.3	ENSMUST00000083600.3	89	1	75	-1870	75	1870	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTGCCCTTGGTCTTG	1072	False	NA	NA	False	NA	NA	NA	69902943	69904827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_69902900_69904800
Isoform_26509_35	chr11	-	177	1	Antisense	novelGene_ENSMUSG00000020886.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	69925180	69925003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_69925000_69925200
Isoform_26510_6	chr11	+	2296	1	NIC	ENSMUSG00000040938.17	novel	1938	7	NA	NA	0	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTCTTGAGAGTTCCA	NA	False	NA	NA	False	AATAAA	-12	NA	70104940	70107236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_70104900_70107200
Isoform_26512_6	chr11	-	160	1	Intergenic	novelGene_1687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAACAACAAAGAC	NA	False	NA	NA	False	NA	NA	NA	70137605	70137445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70137400_70137600
Isoform_26513_20	chr11	+	179	1	Intergenic	novelGene_1688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	70160192	70160371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_70160200_70160400
Isoform_26516_4	chr11	+	285	1	Intergenic	novelGene_1689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	70254674	70254959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_70254700_70255000
Isoform_26519_39	chr11	-	174	1	Intergenic	novelGene_1690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGATGAACACATAA	NA	False	NA	NA	False	NA	NA	NA	70309141	70308967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70309000_70309100
Isoform_2652_25	chr10	-	7426	37	FSM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	-9	0	-9	0	multi-exon	FALSE	canonical	3	63	junction_35	14.4571258434836	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTGCTCATC	NA	False	NA	-4	True	AATAAA	-13	NA	75600159	75481945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
Isoform_26520_4	chr11	-	188	1	Intergenic	novelGene_1691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTTACTTTATGAGT	6741	False	NA	NA	False	NA	NA	NA	70315787	70315599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70315600_70315800
Isoform_26521_39	chr11	+	165	1	Intergenic	novelGene_1692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTCT	NA	False	NA	NA	False	NA	NA	NA	70316124	70316289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_70316100_70316300
Isoform_26522_9	chr11	+	181	1	Intergenic	novelGene_1693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	70349154	70349335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_70349200_70349300
Isoform_26523_14	chr11	-	190	1	Intergenic	novelGene_1694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGAAGCAGCCAGCCGA	9147	False	NA	NA	False	NA	NA	NA	70372814	70372624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70372600_70372800
Isoform_26525_72	chr11	+	189	1	Intergenic	novelGene_1695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATCAGGAAAGC	NA	False	NA	NA	False	AATAAA	-7	NA	70413054	70413243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_70413100_70413200
Isoform_26526_8	chr11	+	2281	1	Genic_Genomic	ENSMUSG00000018286.7	novel	NA	NA	NA	NA	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACGTTTCTGTGTGAA	NA	False	NA	21	True	AATAAA	-11	NA	70416192	70418473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_70416200_70418500
Isoform_26529_3	chr11	+	458	1	Intergenic	novelGene_1696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAAAACAC	7237	False	NA	NA	False	NA	NA	NA	70518332	70518790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_70518300_70518800
Isoform_26530_9	chr11	+	194	1	Intergenic	novelGene_1697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGAAGACATTAAAACAT	7895	False	NA	NA	False	NA	NA	NA	70518990	70519184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_70519000_70519200
Isoform_26531_12	chr11	+	176	1	Intergenic	novelGene_1698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGAATATTTTT	2663	False	NA	NA	False	NA	NA	NA	70522292	70522468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_70522300_70522500
Isoform_26532_16	chr11	-	168	1	Intergenic	novelGene_1699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	70524868	70524700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70524700_70524900
Isoform_26533_12	chr11	-	180	1	Intergenic	novelGene_1700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	70527670	70527490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70527500_70527700
Isoform_2654_16	chr10	-	7333	37	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	18.2485201497086	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTGCTCATC	NA	False	NA	-4	True	AATAAA	-13	NA	75600153	75481945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549373_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
Isoform_26542_3	chr11	+	806	1	Antisense	novelGene_ENSMUSG00000018293.5_AS_novelGene_ENSMUSG00000087523.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAGAAAAAAAAAAAA	4035	False	NA	NA	False	NA	NA	NA	70544949	70545755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_70544900_70545800
Isoform_26543_9	chr11	-	3320	1	NIC	ENSMUSG00000018287.13	novel	1159	7	NA	NA	-4	-1576	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	70560120	70556800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_70556800_70560100
Isoform_26544_20	chr11	-	176	1	Intergenic	novelGene_1701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	5252	False	NA	NA	False	NA	NA	NA	70581906	70581730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70581700_70581900
Isoform_26545_3	chr11	+	170	1	Intergenic	novelGene_1702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTAAAAAAATACTAGATA	NA	False	NA	NA	False	NA	NA	NA	70588971	70589141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_70589000_70589100
Isoform_26549_8	chr11	+	2510	1	Genic_Genomic	ENSMUSG00000020817.17	novel	NA	NA	NA	NA	-24	-46858	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70735579	70738089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_70735600_70738100
Isoform_2655_11	chr10	-	5004	23	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	1	74107	1	1100	5prime_fragment	FALSE	canonical	3	63	junction_21	9.9474860813596	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAGTCGTGAAAATG	NA	False	NA	NA	False	NA	NA	NA	75600149	75556052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
Isoform_26550_19	chr11	-	177	1	Intergenic	novelGene_1703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAACAGGAACT	NA	False	NA	NA	False	NA	NA	NA	70740384	70740207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70740200_70740400
Isoform_26551_4	chr11	+	182	1	Intergenic	novelGene_1332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATATTTGGTTA	NA	False	NA	NA	False	NA	NA	NA	5456565	5456747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5456600_5456700
Isoform_2656_11	chr10	-	2133	11	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	-11	96788	-11	7166	5prime_fragment	FALSE	canonical	3	63	junction_9	9.60676844729798	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGTGGAGGAGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	75600161	75578733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
Isoform_26562_4	chr11	-	296	1	Intergenic	novelGene_1705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTTTTAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	70937874	70937578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_70937600_70937900
Isoform_26563_11	chr11	-	176	1	Intergenic	novelGene_1706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAGAAGAAA	7701	False	NA	NA	False	NA	NA	NA	71011579	71011403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_71011400_71011600
Isoform_26564_3	chr11	-	1969	1	Intergenic	novelGene_1707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGACTATCCATAAGTTC	NA	False	NA	NA	False	NA	NA	NA	71398585	71396616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_71396600_71398600
Isoform_26567_4	chr11	-	167	1	Intergenic	novelGene_1708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAATCTTTAAAAAAAGAAA	4078	False	NA	NA	False	NA	NA	NA	72033476	72033309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_72033300_72033500
Isoform_26572_4	chr11	+	224	1	Intergenic	novelGene_1709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATATTTATTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	72188975	72189199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_72189000_72189200
Isoform_26579_3	chr11	-	301	1	Intergenic	novelGene_1711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72331690	72331389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_72331400_72331700
Isoform_2658_220	chr10	-	605	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	45	-1	45	1	multi-exon	FALSE	canonical	3	462	junction_2	12	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGACTTCTTTGCTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	75609203	75607065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75607341_75608571_75608748_75609049
Isoform_26585_33	chr5	+	178	1	Intergenic	novelGene_8700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTGGA	NA	False	NA	NA	False	NA	NA	NA	105295228	105295406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_105295200_105295400
Isoform_26586_491	chr11	-	198	1	Intergenic	novelGene_1712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	491	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2079	False	NA	NA	False	NA	NA	NA	72487887	72487689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_72487700_72487900
Isoform_26587_8	chr11	+	172	1	Intergenic	novelGene_1713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCTTAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	72496147	72496319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_72496100_72496300
Isoform_26588_8	chr11	+	172	1	Intergenic	novelGene_1714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGAAAGAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	72497061	72497233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_72497100_72497200
Isoform_26589_7	chr11	-	1343	1	Antisense	novelGene_ENSMUSG00000020794.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTTTGTTTCTTCTTTC	3839	False	NA	NA	False	AATAAA	-39	NA	72498604	72497261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_72497300_72498600
Isoform_26590_8	chr11	-	982	1	Antisense	novelGene_ENSMUSG00000020794.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACGTTTAAGTAAATA	3839	False	NA	NA	False	AATAAA	-21	NA	72498604	72497622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_72497600_72498600
Isoform_26594_5	chr11	-	2858	1	Intergenic	novelGene_1715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGAAGTCGGGCGGTG	4699	False	NA	NA	False	TATAAA	-31	NA	72535855	72532997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_72533000_72535900
Isoform_26595_23	chr11	-	177	1	Intergenic	novelGene_1716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATATATATA	2546	False	NA	NA	False	NA	NA	NA	72538008	72537831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_72537800_72538000
Isoform_26597_22	chr11	+	188	1	Intergenic	novelGene_1333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATCAACTTCCC	NA	False	NA	NA	False	NA	NA	NA	5628025	5628213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5628000_5628200
Isoform_2660_22	chr10	-	1554	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	317	9	-47	-9	multi-exon	FALSE	canonical	3	19	junction_4	2.34520787991171	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTAATGGTTTTGCTT	NA	False	NA	-4	True	AATAAA	-14	NA	75616931	75609957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
Isoform_26601_84	chr9	+	205	1	Intergenic	novelGene_11496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTTAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	75962881	75963086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_75962900_75963100
Isoform_26603_4	chr11	+	181	1	Intergenic	novelGene_1717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCTTTTTTAAAAAAAAAGA	3271	False	NA	NA	False	NA	NA	NA	72610670	72610851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_72610700_72610900
Isoform_26605_9	chr11	-	162	1	Intergenic	novelGene_1718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72649632	72649470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_72649500_72649600
Isoform_26608_7	chr11	-	163	1	Intergenic	novelGene_1719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAATCAAAATAA	NA	False	NA	NA	False	NA	NA	NA	72671573	72671410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_72671400_72671600
Isoform_2661_5	chr10	-	1856	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	17	7	4	-7	multi-exon	FALSE	canonical	3	19	junction_4	2.34520787991171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAATGGTTTTGCTTCT	NA	False	NA	-2	True	AATAAA	-16	NA	75617231	75609955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
Isoform_26616_808	chr11	+	166	1	Intergenic	novelGene_1720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	808	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	7435	False	NA	NA	False	NA	NA	NA	73017245	73017411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_73017200_73017400
Isoform_26617_6	chr11	-	6207	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	11	-3408	11	3408	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCCTGTCACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	73029109	73022902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_73022900_73029100
Isoform_26619_12	chr11	-	3106	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	11	-307	11	307	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGGCTGGCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	73029109	73026003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_73026000_73029100
Isoform_2662_7	chr10	-	1023	5	FSM	ENSMUSG00000001663.11	ENSMUST00000001713.10	1037	5	11	3	11	-3	multi-exon	FALSE	canonical	1	1	junction_4	2.87228132326901	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTCCGTGTTGTTTC	9587	False	NA	NA	False	AATAAA	-21	NA	75634407	75619649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75620068_75622628_75622806_75629910_75630062_75632876_75632965_75634218
Isoform_26620_256	chr11	-	2800	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	11	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGATTTGGCTTATT	NA	False	NA	-6	True	AATAAA	-18	NA	73029109	73026309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_73026300_73029100
Isoform_2663_16	chr10	-	894	5	FSM	ENSMUSG00000033318.8	ENSMUST00000038257.7	1370	5	471	5	-27	-5	multi-exon	FALSE	canonical	3	39	junction_1	6.29980158417708	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTCCTTTTTTTTCT	NA	False	NA	-9	True	AATAAA	-16	NA	75670244	75667683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008
Isoform_26631_11	chr11	+	166	1	Intergenic	novelGene_1721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGAGAGGTGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	73030090	73030256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_73030100_73030300
Isoform_2664_5	chr10	-	996	5	FSM	ENSMUSG00000033318.8	ENSMUST00000038257.7	1370	5	371	3	-31	-3	multi-exon	FALSE	canonical	3	39	junction_1	6.29980158417708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCTTTTTTTTCTTT	NA	False	NA	-7	True	AATAAA	-18	NA	75670344	75667681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008
Isoform_26642_33	chr11	-	176	1	Intergenic	novelGene_2331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATGGCTTACAG	NA	False	NA	NA	False	NA	NA	NA	118034325	118034149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_118034100_118034300
Isoform_26647_5	chr11	-	2403	1	Genic_Genomic	ENSMUSG00000038807.20	novel	NA	NA	NA	NA	-58	-83364	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGGAAGGTTGGGAAT	NA	False	NA	NA	False	NA	NA	NA	74413635	74411232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_74411200_74413600
Isoform_2665_9	chr10	-	997	6	NNC	ENSMUSG00000033318.8	novel	2254	6	NA	NA	-684	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	16.6805275695944	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCCTTTTTTTTCTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	75671399	75667680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008_75670242_75671296
Isoform_26652_4	chr11	-	201	1	Intergenic	novelGene_1722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTTCATTTTGTGTG	5117	False	NA	NA	False	NA	NA	NA	74517656	74517455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_74517500_74517700
Isoform_26653_44	chr11	-	172	1	Intergenic	novelGene_1723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	74526360	74526188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_74526200_74526400
Isoform_26659_69	chr11	-	164	1	Intergenic	novelGene_1724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACCCAAATTTA	NA	False	NA	NA	False	NA	NA	NA	74597322	74597158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_74597200_74597300
Isoform_26662_4	chr11	+	2889	2	Antisense	novelGene_ENSMUSG00000020745.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATTTTTAAAATTGAT	NA	False	NA	NA	False	NA	NA	NA	74609181	74612090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_74610001_74610020
Isoform_26665_54	chr11	+	174	1	Intergenic	novelGene_1725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	540	False	NA	NA	False	NA	NA	NA	74620235	74620409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_74620200_74620400
Isoform_26666_15	chr11	-	165	1	Intergenic	novelGene_1726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	74621248	74621083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_74621100_74621200
Isoform_26669_354	chr11	+	174	1	Intergenic	novelGene_1335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGACAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	5694844	5695018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5694800_5695000
Isoform_26678_6	chr11	+	189	1	Intergenic	novelGene_1727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCAGTATGTGA	NA	False	NA	NA	False	NA	NA	NA	74745870	74746059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_74745900_74746100
Isoform_26679_7	chr11	-	235	1	Intergenic	novelGene_1728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTACCGTGTGAGGCC	104	False	NA	NA	False	NA	NA	NA	74770623	74770388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_74770400_74770600
Isoform_26681_25	chr11	-	1165	2	Antisense	novelGene_ENSMUSG00000038335.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74794813	74793612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_74793953_74793988
Isoform_26685_3	chr11	-	1049	1	NIC	ENSMUSG00000001323.18	novel	3699	9	NA	NA	-3	-13513	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	74816489	74815440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_74815400_74816500
Isoform_26688_4	chr11	-	172	1	Intergenic	novelGene_1729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAAATGTTTTATTTTG	7668	False	NA	NA	False	NA	NA	NA	74824559	74824387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_74824400_74824600
Isoform_26689_3	chr11	-	232	1	Intergenic	novelGene_1730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAATCTGACCAGAATGG	NA	False	NA	NA	False	AAGAAA	-3	NA	74832854	74832622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_74832600_74832900
Isoform_26690_19	chr11	+	175	1	Intergenic	novelGene_1731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTTTTTAAA	4827	False	NA	NA	False	NA	NA	NA	74836073	74836248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_74836100_74836200
Isoform_26691_3	chr11	-	156	1	Intergenic	novelGene_1732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	74840826	74840670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_74840700_74840800
Isoform_26694_9	chr11	+	171	1	Intergenic	novelGene_1733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAAAAAATCATACTT	NA	False	NA	NA	False	NA	NA	NA	74977546	74977717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_74977500_74977700
Isoform_26695_64	chr11	-	177	1	Intergenic	novelGene_1734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATGACC	NA	False	NA	NA	False	NA	NA	NA	74984603	74984426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_74984400_74984600
Isoform_26698_29	chr11	+	158	1	Intergenic	novelGene_1735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	75004859	75005017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75004900_75005000
Isoform_26702_6	chr11	+	176	1	Intergenic	novelGene_1336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTAGTTA	NA	False	NA	NA	False	NA	NA	NA	5734804	5734980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5734800_5735000
Isoform_26703_4	chr11	-	174	1	Intergenic	novelGene_1737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75098062	75097888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75097900_75098100
Isoform_26704_4	chr11	-	178	1	Intergenic	novelGene_1738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAAATTTAAC	NA	False	NA	NA	False	NA	NA	NA	75112929	75112751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75112800_75112900
Isoform_26708_4	chr11	-	447	1	Intergenic	novelGene_1337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATAGTGGGGTAATGAA	2768	False	NA	NA	False	NA	NA	NA	5738393	5737946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_5737900_5738400
Isoform_26714_7	chr11	+	171	1	Intergenic	novelGene_1740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATACCTTTAAAAA	741	False	NA	NA	False	NA	NA	NA	75194735	75194906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75194700_75194900
Isoform_26715_8	chr11	+	4682	1	Antisense	novelGene_ENSMUSG00002076300.1_AS_novelGene_ENSMUSG00000000751.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAACCCAACACATGTA	117	False	NA	NA	False	NA	NA	NA	75206946	75211628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_75206900_75211600
Isoform_26716_15	chr11	+	178	1	Intergenic	novelGene_1772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	76366859	76367037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76366900_76367000
Isoform_26717_136	chr11	+	174	1	Intergenic	novelGene_1291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTGTAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	3122088	3122262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_3122100_3122300
Isoform_26718_15	chr11	+	181	1	Intergenic	novelGene_1741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	75299787	75299968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75299800_75300000
Isoform_26719_19	chr11	+	176	1	Intergenic	novelGene_1742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	75324730	75324906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75324700_75324900
Isoform_2672_3999	chr10	-	553	3	FSM	ENSMUSG00000033307.8	ENSMUST00000038169.8	544	3	-12	3	-12	-3	multi-exon	FALSE	canonical	3	12818	junction_1	2119	3999	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGGTTGCCTCAGCTTCT	NA	False	NA	-13	True	AATAAA	-15	NA	75696086	75695189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75695378_75695520_75695694_75695894
Isoform_26720_103	chr11	+	183	1	Intergenic	novelGene_1743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAGAAAGGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	75347022	75347205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75347000_75347200
Isoform_26723_6	chr11	-	181	1	Intergenic	novelGene_1744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTTAAAAAAAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	75366917	75366736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75366700_75366900
Isoform_26724_104	chr11	+	184	1	Intergenic	novelGene_1745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTTATTTACTTAT	NA	False	NA	NA	False	NA	NA	NA	75369386	75369570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75369400_75369600
Isoform_26725_77	chr11	-	173	1	Intergenic	novelGene_1746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGATTTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	75369746	75369573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75369600_75369700
Isoform_26726_11	chr11	+	2036	1	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	-1	-5081	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	75377644	75379680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75377600_75379700
Isoform_26730_47	chr11	+	169	1	Intergenic	novelGene_1747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATTAAAAAAAAAAGATAT	2788	False	NA	NA	False	NA	NA	NA	75418436	75418605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75418400_75418600
Isoform_26731_6	chr11	+	173	1	Intergenic	novelGene_1748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAACAAAC	3500	False	NA	NA	False	NA	NA	NA	75419148	75419321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75419100_75419300
Isoform_26734_136	chr11	+	180	1	Intergenic	novelGene_1749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTTTGT	4987	False	NA	NA	False	NA	NA	NA	75473186	75473366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75473200_75473400
Isoform_26735_2303	chr11	-	399	1	FSM	ENSMUSG00000081485.6	ENSMUST00000122170.2	192	1	-92	-115	-92	115	mono-exon	FALSE	NA	NA	NA	NA	NA	2303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTCTT	NA	False	NA	NA	False	AATAAA	-12	NA	75490872	75490473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_75490500_75490900
Isoform_26736_22	chr17	+	168	1	FSM	ENSMUSG00000057580.5	ENSMUST00000170379.2	372	1	143	61	137	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATTATCACAAAA	4175	False	NA	NA	False	AATAAA	-10	NA	26120972	26121140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26121000_26121100
Isoform_26740_6	chr11	+	179	1	Intergenic	novelGene_1750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	3572	False	NA	NA	False	NA	NA	NA	75537064	75537243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75537100_75537200
Isoform_26741_28	chr11	+	172	1	Intergenic	novelGene_1751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTTAAAAAAAGTT	7273	False	NA	NA	False	NA	NA	NA	75540765	75540937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75540800_75540900
Isoform_26742_14	chr11	+	1539	1	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	16	-4584	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	8859	False	NA	NA	False	NA	NA	NA	75542351	75543890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_75542400_75543900
Isoform_26745_23	chr11	+	188	1	Intergenic	novelGene_1752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAAATGT	1611	False	NA	NA	False	NA	NA	NA	75565270	75565458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75565300_75565500
Isoform_26747_70	chr11	+	179	1	Intergenic	novelGene_1753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5317	False	NA	NA	False	NA	NA	NA	75582449	75582628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75582400_75582600
Isoform_26748_54	chr11	-	151	1	Intergenic	novelGene_1754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTTAAAAAAAAAGAAAA	6366	False	NA	NA	False	NA	NA	NA	75588432	75588281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75588300_75588400
Isoform_26762_3	chr11	-	592	1	Intergenic	novelGene_1755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGGAAAGA	7148	False	NA	NA	False	NA	NA	NA	75623654	75623062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75623100_75623700
Isoform_26763_4	chr11	-	220	1	Intergenic	novelGene_1756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAAAGAGCAG	3957	False	NA	NA	False	AATAAA	-27	NA	75626845	75626625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75626600_75626800
Isoform_26765_6	chr11	-	176	1	Intergenic	novelGene_1757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAATGGTAC	NA	False	NA	NA	False	NA	NA	NA	75633587	75633411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75633400_75633600
Isoform_26767_4	chr11	+	177	1	Intergenic	novelGene_1338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAGAAAGAAGTT	229	False	NA	NA	False	NA	NA	NA	5798225	5798402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_5798200_5798400
Isoform_26769_8	chr11	-	175	1	Intergenic	novelGene_1758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	75652569	75652394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75652400_75652600
Isoform_26775_17	chr11	-	737	1	Antisense	novelGene_ENSMUSG00000020849.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	AAAAAG	-10	NA	75656402	75655665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_75655700_75656400
Isoform_26787_7	chr11	-	175	1	Intergenic	novelGene_1760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	75702373	75702198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75702200_75702400
Isoform_2679_474	chr10	-	1616	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	39	5	11	1	multi-exon	FALSE	canonical	3	255	junction_7	283.203990084886	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTGCAGTAGCATAA	6900	False	NA	-7	True	AATAAA	-15	NA	75757412	75732607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
Isoform_26790_168	chr11	-	175	1	Intergenic	novelGene_1761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATCCAAATC	NA	False	NA	NA	False	NA	NA	NA	75887451	75887276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75887300_75887500
Isoform_26791_97	chr11	+	190	1	Intergenic	novelGene_1762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	75888396	75888586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75888400_75888600
Isoform_26792_14	chr11	-	173	1	Intergenic	novelGene_1763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	75946565	75946392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_75946400_75946600
Isoform_26794_47	chr11	+	178	1	Intergenic	novelGene_1764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTTA	6863	False	NA	NA	False	NA	NA	NA	76018997	76019175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76019000_76019200
Isoform_26797_134	chr11	+	169	1	Intergenic	novelGene_1766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	76040661	76040830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76040700_76040800
Isoform_26800_24	chr11	+	175	1	Intergenic	novelGene_1767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGAAAATGA	1289	False	NA	NA	False	NA	NA	NA	76090723	76090898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76090700_76090900
Isoform_2681_1285	chr10	-	1609	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	16	-3	-9	1	multi-exon	FALSE	canonical	3	799	junction_7	118.779206934547	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTGCAGTAGCATAA	6880	False	NA	-7	True	AATAAA	-15	NA	75757432	75732607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
Isoform_26814_6	chr11	+	188	1	Intergenic	novelGene_1768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTATCTGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	76272795	76272983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76272800_76273000
Isoform_26815_74	chr11	+	176	1	Intergenic	novelGene_1769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	76291784	76291960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76291800_76292000
Isoform_26816_11	chr11	-	166	1	Intergenic	novelGene_1770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGTGCAAAACC	2620	False	NA	NA	False	NA	NA	NA	76301558	76301392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_76301400_76301600
Isoform_26817_435	chr11	+	180	1	Intergenic	novelGene_1771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	435	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	76302255	76302435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76302300_76302400
Isoform_26825_3	chr11	+	165	1	Intergenic	novelGene_1773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGCCCGGAGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	76488539	76488704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76488500_76488700
Isoform_26828_3	chr11	+	792	1	Antisense	novelGene_ENSMUSG00000017631.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGCGTTTTTTTTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	76513415	76514207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_76513400_76514200
Isoform_26829_99	chr11	-	200	1	Intergenic	novelGene_1774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTATTAGTTTATGTGT	1937	False	NA	NA	False	NA	NA	NA	76526179	76525979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_76526000_76526200
Isoform_26830_12	chr11	+	181	1	Intergenic	novelGene_1775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	76575406	76575587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76575400_76575600
Isoform_26832_5	chr11	-	168	1	Intergenic	novelGene_1776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGATGGCTTG	NA	False	NA	NA	False	NA	NA	NA	76593455	76593287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_76593300_76593500
Isoform_26837_4	chr11	+	177	1	Intergenic	novelGene_1777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTATGATTA	8514	False	NA	NA	False	NA	NA	NA	76706017	76706194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_76706000_76706200
Isoform_26838_88	chr11	-	174	1	Intergenic	novelGene_1778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATCATTTTGGCTCA	NA	False	NA	-14	True	NA	NA	NA	76813415	76813241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_76813200_76813400
Isoform_26843_3	chr11	-	5427	1	FSM	ENSMUSG00000077649.3	ENSMUST00000104461.3	88	1	-612	-4727	-612	4727	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGGTTGCAAAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	77136453	77131026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_77131000_77136500
Isoform_26845_9	chr11	-	185	1	Intergenic	novelGene_1779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTTCTTCCGATTCT	3008	False	NA	NA	False	NA	NA	NA	77185889	77185704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77185700_77185900
Isoform_26847_3	chr11	+	1312	1	Genic_Genomic	ENSMUSG00000083899.3	novel	NA	NA	NA	NA	1671	528	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGTTGCAGGTGGCCA	NA	False	NA	NA	False	GATAAA	-37	NA	77185940	77187252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_77185900_77187300
Isoform_26854_11	chr11	+	178	1	Intergenic	novelGene_1780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	77197376	77197554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77197400_77197600
Isoform_26855_12	chr11	+	175	1	Intergenic	novelGene_1781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	77246441	77246616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77246400_77246600
Isoform_26856_133	chr11	+	176	1	Intergenic	novelGene_1782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAG	NA	False	NA	NA	False	NA	NA	NA	77280604	77280780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77280600_77280800
Isoform_26857_3	chr11	+	175	1	ISM	ENSMUSG00000037926.16	ENSMUST00000180554.2	3482	10	83404	291	40255	-291	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGGTCATTTTCAG	NA	False	NA	NA	False	NA	NA	NA	77322517	77322692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_77322500_77322700
Isoform_26862_7	chr11	-	4713	1	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	51631	1	51631	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCTCACTTTATTTT	NA	False	NA	1	True	AATAAA	-18	NA	77424701	77419988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_77420000_77424700
Isoform_26863_4	chr11	-	5360	1	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	50984	1	50984	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCTCACTTTATTTT	NA	False	NA	1	True	AATAAA	-18	NA	77425348	77419988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_77420000_77425300
Isoform_26865_4	chr11	-	8520	1	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	47818	7	47818	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTGTCTGCTCACTT	NA	False	NA	-5	True	AATAAA	-12	NA	77428514	77419994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_77420000_77428500
Isoform_26867_6	chr11	-	4894	1	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	51446	5	51446	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGTCTGCTCACTTTA	NA	False	NA	-3	True	AATAAA	-14	NA	77424886	77419992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_77420000_77424900
Isoform_26871_4	chr11	-	6059	1	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	50280	6	50280	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGTCTGCTCACTTT	NA	False	NA	-4	True	AATAAA	-13	NA	77426052	77419993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_77420000_77426100
Isoform_2688_106	chr10	-	1792	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	0	1	0	0	multi-exon	FALSE	canonical	3	68	junction_1	51.1639521538358	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCCTGTCTGTTTTTCTT	5083	False	NA	-4	True	ATTAAA	-16	NA	75768309	75759056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
Isoform_26883_8	chr11	-	176	1	Intergenic	novelGene_1783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAGAAAA	3467	False	NA	NA	False	NA	NA	NA	77486565	77486389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77486400_77486600
Isoform_26888_40	chr11	+	175	1	Intergenic	novelGene_1784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATTCTGAATAAC	4489	False	NA	NA	False	NA	NA	NA	77511810	77511985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77511800_77512000
Isoform_26890_3	chr11	+	184	1	Intergenic	novelGene_1785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGAAAGAAAGAAAGGAA	284	False	NA	NA	False	NA	NA	NA	77513808	77513992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77513800_77514000
Isoform_26892_46	chr11	+	213	1	Intergenic	novelGene_1786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGGTGACAGATTATGA	NA	False	NA	NA	False	NA	NA	NA	77543238	77543451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77543200_77543500
Isoform_26894_16	chr11	+	245	1	Intergenic	novelGene_1787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACGCACTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	77554183	77554428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77554200_77554400
Isoform_26895_61	chr11	+	178	1	Intergenic	novelGene_1788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCTTTTTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	77564837	77565015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77564800_77565000
Isoform_26897_6	chr11	-	176	1	Intergenic	novelGene_1789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAATTAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	77572593	77572417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77572400_77572600
Isoform_26898_7	chr11	+	716	1	NIC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	-2	-4833	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	77576995	77577711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_77577000_77577700
Isoform_26899_28	chr11	+	187	1	Intergenic	novelGene_1790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	77587368	77587555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77587400_77587600
Isoform_26904_3	chr11	+	2420	1	Intergenic	novelGene_1791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTGTGTCATTACCAAA	NA	False	NA	21	True	AATAAA	-26	NA	77604973	77607393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77605000_77607400
Isoform_26905_3	chr11	+	3434	1	Intergenic	novelGene_1792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTGTTTGTGGGTTT	NA	False	NA	12	True	AATAAA	-15	NA	77605358	77608792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77605400_77608800
Isoform_26906_3	chr11	+	1657	1	Intergenic	novelGene_1793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGTGTCATTACCAA	NA	False	NA	20	True	AATAAA	-25	NA	77605735	77607392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77605700_77607400
Isoform_26907_14	chr11	+	181	1	Intergenic	novelGene_1794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGGAATGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77629088	77629269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77629100_77629300
Isoform_26908_5	chr11	-	231	1	Intergenic	novelGene_1795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTAGCTTCCAGGCTT	NA	False	NA	NA	False	NA	NA	NA	77647497	77647266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77647300_77647500
Isoform_26910_6	chr11	-	263	1	Intergenic	novelGene_1796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTAATTTTCTGTATT	NA	False	NA	NA	False	TATAAA	-13	NA	77666016	77665753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77665800_77666000
Isoform_26912_18	chr11	-	179	1	Intergenic	novelGene_1797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	5651	False	NA	NA	False	NA	NA	NA	77680342	77680163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77680200_77680300
Isoform_26918_27	chr11	+	177	1	Intergenic	novelGene_1798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCAG	6831	False	NA	NA	False	NA	NA	NA	77809260	77809437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77809300_77809400
Isoform_26919_57	chr11	+	206	1	Intergenic	novelGene_1799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATTACTTAAAAAAA	7065	False	NA	NA	False	NA	NA	NA	77818285	77818491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77818300_77818500
Isoform_26920_24	chr11	-	181	1	Intergenic	novelGene_1339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACATAAT	NA	False	NA	NA	False	NA	NA	NA	6146871	6146690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6146700_6146900
Isoform_26921_23	chr11	+	198	1	Intergenic	novelGene_1800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGGAAAGAAGGCACCA	NA	False	NA	NA	False	NA	NA	NA	77916008	77916206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77916000_77916200
Isoform_26922_4	chr11	-	2577	1	Antisense	novelGene_ENSMUSG00000084941.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAATATGTCTTT	4159	False	NA	NA	False	NA	NA	NA	3262241	3259664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_3259700_3262200
Isoform_26926_5	chr11	-	170	1	Intergenic	novelGene_1801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77932522	77932352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77932400_77932500
Isoform_26927_5	chr11	-	178	1	Intergenic	novelGene_1802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTCAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	77935041	77934863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77934900_77935000
Isoform_26928_8	chr11	-	330	1	Intergenic	novelGene_1803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACCAACCAAA	NA	False	NA	NA	False	NA	NA	NA	77939626	77939296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77939300_77939600
Isoform_26929_8	chr11	-	223	1	Intergenic	novelGene_1804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCACTCGGGAGGCCG	NA	False	NA	NA	False	AAAACA	-29	NA	77939627	77939404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77939400_77939600
Isoform_2693_516	chr10	-	2260	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	27	1	0	0	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCCTGTCTGTTTTTCTT	5083	False	NA	-4	True	ATTAAA	-16	NA	75768309	75759056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
Isoform_26931_3	chr11	+	173	1	Intergenic	novelGene_1805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATTTATATAAGTA	454	False	NA	NA	False	NA	NA	NA	77954312	77954485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77954300_77954500
Isoform_26932_24	chr11	+	176	1	Intergenic	novelGene_1806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77967268	77967444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77967300_77967400
Isoform_26933_13	chr11	-	913	1	NIC	ENSMUSG00000020832.15	novel	2014	10	NA	NA	11	-4929	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAGAGA	NA	False	NA	NA	False	CATAAA	-30	NA	77971198	77970285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_77970300_77971200
Isoform_26935_6	chr11	+	377	1	Intergenic	novelGene_1807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAACAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	77972419	77972796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77972400_77972800
Isoform_26936_438	chr11	-	176	1	Intergenic	novelGene_1808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGTAGGGGGTC	NA	False	NA	NA	False	NA	NA	NA	77977884	77977708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77977700_77977900
Isoform_26937_26	chr11	-	175	1	Intergenic	novelGene_1809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	77984606	77984431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_77984400_77984600
Isoform_26938_3	chr11	+	217	1	Intergenic	novelGene_1810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGACTATGAGCACTCGCTG	1891	False	NA	NA	False	NA	NA	NA	77984778	77984995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_77984800_77985000
Isoform_26939_46	chr2	-	177	1	Intergenic	novelGene_6180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34710690	34710513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_34710500_34710700
Isoform_2694_42	chr10	-	2289	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5055	False	NA	-3	True	ATTAAA	-17	NA	75768337	75759055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
Isoform_26940_35	chr17	-	223	1	Intergenic	novelGene_4867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCTCATGAATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	30863910	30863687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_30863700_30863900
Isoform_26945_3	chr11	-	771	1	NIC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	-1	-4671	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAAAGCAG	6295	False	NA	NA	False	NA	NA	NA	78067454	78066683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78066700_78067500
Isoform_26947_72	chr11	+	176	1	Intergenic	novelGene_1812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATCA	2524	False	NA	NA	False	NA	NA	NA	78075754	78075930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_78075800_78075900
Isoform_26949_44	chr11	-	177	1	Intergenic	novelGene_1813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGAAAATGCT	NA	False	NA	NA	False	NA	NA	NA	78083207	78083030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78083000_78083200
Isoform_26951_8	chr11	-	2073	1	NIC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	293	-36594	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCAAACCAAACCAAACCA	NA	False	NA	NA	False	NA	NA	NA	78136520	78134447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_78134400_78136500
Isoform_26953_69	chr11	-	227	1	Intergenic	novelGene_1814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATATTTAAACACAGTT	9955	False	NA	NA	False	NA	NA	NA	78150964	78150737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78150700_78151000
Isoform_26955_12	chr11	+	175	1	Intergenic	novelGene_1815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAG	390	False	NA	NA	False	NA	NA	NA	78179385	78179560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_78179400_78179600
Isoform_26957_25	chr11	-	164	1	Intergenic	novelGene_1816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTAGTC	NA	False	NA	NA	False	NA	NA	NA	78212846	78212682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78212700_78212800
Isoform_26959_24	chr11	+	179	1	Intergenic	novelGene_1817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78218688	78218867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_78218700_78218900
Isoform_26961_6	chr11	+	172	1	Intergenic	novelGene_1818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	78279099	78279271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_78279100_78279300
Isoform_26963_22	chr11	-	176	1	Intergenic	novelGene_1819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACAGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	78323219	78323043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78323000_78323200
Isoform_26964_3	chr11	+	308	1	Intergenic	novelGene_1820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAACCATAGAAAT	1325	False	NA	NA	False	NA	NA	NA	78329773	78330081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_78329800_78330100
Isoform_26966_5	chr11	-	173	1	Intergenic	novelGene_1340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTGCAGTTTGGGAAC	NA	False	NA	NA	False	NA	NA	NA	6254813	6254640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6254600_6254800
Isoform_26967_9	chr11	+	5064	1	NIC	ENSMUSG00000001105.16	novel	1141	6	NA	NA	-5	12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCCCAACCAAAAAAACA	NA	False	NA	52	True	NA	NA	NA	78427263	78432327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_78427300_78432300
Isoform_26969_8	chr11	+	1958	1	Antisense	novelGene_ENSMUSG00000037278.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	78433402	78435360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_78433400_78435400
Isoform_26971_37	chr11	+	177	1	Intergenic	novelGene_1341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTTACAGG	NA	False	NA	13	True	NA	NA	NA	6259933	6260110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_6259900_6260100
Isoform_26972_24	chr11	+	181	1	Intergenic	novelGene_1821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAAGATGTT	NA	False	NA	NA	False	NA	NA	NA	78464313	78464494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_78464300_78464500
Isoform_26973_40	chr11	+	260	1	Intergenic	novelGene_1822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATTTATTTAATAAACA	NA	False	NA	NA	False	NA	NA	NA	78465084	78465344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_78465100_78465300
Isoform_26974_18	chr11	-	176	1	Intergenic	novelGene_1823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAACACACAAAG	NA	False	NA	NA	False	NA	NA	NA	78596434	78596258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78596300_78596400
Isoform_26975_24	chr9	+	177	1	Intergenic	novelGene_11412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGCATGATG	NA	False	NA	NA	False	NA	NA	NA	65503571	65503748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_65503600_65503700
Isoform_26977_372	chr11	-	1176	1	FSM	ENSMUSG00000049489.6	ENSMUST00000059468.6	1224	1	48	0	48	0	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTGCCTTATGGTA	6643	False	NA	-2	True	AATAAA	-37	NA	78642507	78641331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_78641300_78642500
Isoform_26979_9	chr11	-	177	1	Intergenic	novelGene_1824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGACATGGGCC	NA	False	NA	NA	False	NA	NA	NA	78672606	78672429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78672400_78672600
Isoform_2698_34	chr10	-	2993	7	NIC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	194	junction_2	15.0489940601431	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCCTGTCTGTTTTTCTT	5083	False	NA	-4	True	ATTAAA	-16	NA	75768309	75759056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
Isoform_26980_3	chr11	-	176	1	Intergenic	novelGene_1825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	78679622	78679446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78679400_78679600
Isoform_26981_79	chr11	-	162	1	Intergenic	novelGene_1826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCTTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78797625	78797463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78797500_78797600
Isoform_26983_83	chr11	-	203	1	Intergenic	novelGene_1827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATACTAAAATCT	NA	False	NA	NA	False	NA	NA	NA	78872526	78872323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78872300_78872500
Isoform_26984_10	chr11	-	174	1	Intergenic	novelGene_1828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	78891659	78891485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78891500_78891700
Isoform_26985_5	chr11	-	182	1	Intergenic	novelGene_1829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	78892459	78892277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78892300_78892500
Isoform_26988_27	chr11	+	176	1	Intergenic	novelGene_1342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAGAAAAGAATG	5145	False	NA	NA	False	NA	NA	NA	6278911	6279087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_6278900_6279100
Isoform_26989_7	chr11	-	174	1	Intergenic	novelGene_1830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAGATAGAGGG	9658	False	NA	NA	False	NA	NA	NA	78959737	78959563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_78959600_78959700
Isoform_26993_12	chr11	+	167	1	Intergenic	novelGene_1832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAGAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	79162579	79162746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79162600_79162700
Isoform_26994_41	chr11	+	175	1	Intergenic	novelGene_1833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGGAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	79184141	79184316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79184100_79184300
Isoform_26995_7	chr11	-	176	1	Intergenic	novelGene_1834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAATCCCAGC	NA	False	NA	NA	False	NA	NA	NA	79189097	79188921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79188900_79189100
Isoform_26998_8	chr11	+	166	1	Intergenic	novelGene_1835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	79217169	79217335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79217200_79217300
Isoform_26999_4	chr11	+	3518	1	Genic_Genomic	ENSMUSG00000020716.17	novel	NA	NA	NA	NA	-16	-1992	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAACTGTAGTAAGAAG	NA	False	NA	NA	False	AAAAAG	-14	NA	79230502	79234020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_79230500_79234000
Isoform_270_57	SIRV10002	+	10000	1	FSM	SIRV10002A	SIRV10002	10001	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	10001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV10002_+_0_10000
Isoform_27000_12	chr11	-	181	1	Intergenic	novelGene_1343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAACAAAAAAAAA	7226	False	NA	NA	False	NA	NA	NA	6284934	6284753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6284800_6284900
Isoform_27003_2432	chr11	-	178	1	Intergenic	novelGene_1836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	79276660	79276482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79276500_79276700
Isoform_27004_42	chr11	+	173	1	Intergenic	novelGene_1837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGGATCAACTGA	3809	False	NA	NA	False	NA	NA	NA	79280590	79280763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79280600_79280800
Isoform_27005_13	chr11	+	170	1	Intergenic	novelGene_1838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATACGGGGGAAAAAGGTA	3124	False	NA	NA	False	NA	NA	NA	79415803	79415973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79415800_79416000
Isoform_27006_16	chr11	-	177	1	Intergenic	novelGene_1344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	6302997	6302820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6302800_6303000
Isoform_27007_3	chr11	-	176	1	Intergenic	novelGene_1839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	79464209	79464033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79464000_79464200
Isoform_27009_4	chr11	+	216	1	Intergenic	novelGene_1840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATATACACATCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	79497473	79497689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79497500_79497700
Isoform_2703_8	chr10	-	1230	7	FSM	ENSMUSG00000050157.7	ENSMUST00000219979.2	714	7	-60	-456	1	3	multi-exon	FALSE	canonical	3	20	junction_5	8.23441288469042	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTATGTCTCCTGTTAG	4917	False	NA	NA	False	AGTAAA	-45	NA	75776505	75773553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_75774191_75774995_75775166_75775239_75775315_75775546_75775673_75775764_75775852_75776227_75776255_75776397
Isoform_27032_39	chr11	-	170	1	Intergenic	novelGene_1841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79606896	79606726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79606700_79606900
Isoform_27033_10	chr11	+	174	1	Intergenic	novelGene_1842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTAATATTCTG	NA	False	NA	NA	False	NA	NA	NA	79619077	79619251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79619100_79619300
Isoform_27034_7	chr11	-	189	1	Intergenic	novelGene_1843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACCAACGAAA	7916	False	NA	NA	False	NA	NA	NA	79667211	79667022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79667000_79667200
Isoform_27035_25	chr11	+	176	1	Intergenic	novelGene_1844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATGGAAGGG	NA	False	NA	NA	False	NA	NA	NA	79734637	79734813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79734600_79734800
Isoform_27036_27	chr11	+	175	1	Intergenic	novelGene_1845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79818665	79818840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79818700_79818800
Isoform_27037_25	chr11	+	179	1	Intergenic	novelGene_1846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATGATTTCCACCTT	NA	False	NA	NA	False	NA	NA	NA	79827900	79828079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79827900_79828100
Isoform_27038_55	chr11	+	177	1	Intergenic	novelGene_1847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTATTCTGAC	NA	False	NA	NA	False	NA	NA	NA	79828822	79828999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79828800_79829000
Isoform_2704_3	chr10	-	1066	5	ISM	ENSMUSG00000050157.7	ENSMUST00000059658.6	1221	7	674	0	613	0	3prime_fragment	FALSE	canonical	3	10	junction_3	12.6589889011722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATTATGTCTCCTGT	5590	False	NA	NA	False	AGTAAA	-42	NA	75775832	75773556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_75774191_75774995_75775166_75775239_75775315_75775553_75775673_75775764
Isoform_27040_16	chr11	+	159	1	Intergenic	novelGene_1848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79860919	79861078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79860900_79861100
Isoform_27042_4	chr11	+	1011	1	Intergenic	novelGene_1858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTTTGGTTGATCAC	NA	False	NA	22	True	NA	NA	NA	79865001	79866012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79865000_79866000
Isoform_27044_15	chr11	-	193	1	Intergenic	novelGene_1859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATATCCAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	79878823	79878630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79878600_79878800
Isoform_27046_3	chr11	+	174	1	Intergenic	novelGene_1345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTATAACTAAA	NA	False	NA	NA	False	NA	NA	NA	6314379	6314553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_6314400_6314600
Isoform_27047_18	chr11	-	275	1	Intergenic	novelGene_1860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAGATAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	79880061	79879786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79879800_79880100
Isoform_27049_4	chr11	-	748	1	Intergenic	novelGene_1861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79883674	79882926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79882900_79883700
Isoform_2705_7	chr10	-	1328	4	NIC	ENSMUSG00000050157.7	novel	1221	7	NA	NA	1	-557	intron_retention	FALSE	canonical	3	20	junction_2	7.58653778449403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	4917	False	NA	NA	False	NA	NA	NA	75776505	75774566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_75775673_75775764_75775852_75776227_75776255_75776397
Isoform_27051_5	chr11	-	4657	1	Antisense	novelGene_ENSMUSG00000017548.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	79894725	79890068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_79890100_79894700
Isoform_27052_43	chr11	-	190	1	Intergenic	novelGene_1862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	79898827	79898637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79898600_79898800
Isoform_27053_4	chr11	-	1497	1	Antisense	novelGene_ENSMUSG00000017548.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAATGAAAACTGA	NA	False	NA	NA	False	NA	NA	NA	79904985	79903488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_79903500_79905000
Isoform_27054_153	chr2	-	177	1	Intergenic	novelGene_6592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGATAAAAAAG	5314	False	NA	NA	False	NA	NA	NA	142832908	142832731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_142832700_142832900
Isoform_2706_25	chr10	-	1979	15	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4506	-1127	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	4.04817923294422	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACCGGGAAATGTTTG	NA	False	NA	NA	False	TATAAA	-21	NA	75951301	75894454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75951237
Isoform_2707_4	chr10	-	3106	15	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4504	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	4.04817923294422	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGCCCGTTATCTG	NA	False	NA	NA	False	NA	NA	NA	75951299	75893325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75951237
Isoform_27079_8	chr11	+	177	1	Intergenic	novelGene_1863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTTAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	79940683	79940860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79940700_79940900
Isoform_2708_5	chr10	-	1902	14	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4504	-1130	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_13	6.11236016163659	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAATGACCGGGAAATGT	NA	False	NA	NA	False	TATAAA	-18	NA	75951299	75894457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75951237
Isoform_27081_6	chr11	+	157	1	Intergenic	novelGene_1864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79960266	79960423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79960300_79960400
Isoform_27085_8	chr11	-	265	1	Intergenic	novelGene_1346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTACTGATTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	6318882	6318617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6318600_6318900
Isoform_27086_5	chr11	-	239	1	Intergenic	novelGene_1865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAACAAAAACTCAAA	NA	False	NA	NA	False	NA	NA	NA	79990049	79989810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_79989800_79990000
Isoform_27087_10	chr11	-	208	1	Intergenic	novelGene_1866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATACTGA	NA	False	NA	NA	False	NA	NA	NA	80019247	80019039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80019000_80019200
Isoform_2709_6	chr10	-	1433	11	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4524	-12804	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_8	2.78567765543682	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCCACTGTCTGATTGT	NA	False	NA	NA	False	AATGAA	-17	NA	75951319	75906131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75951237
Isoform_27091_9	chr11	-	145	1	Intergenic	novelGene_1867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAATAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	80022505	80022360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80022400_80022500
Isoform_27092_4	chr11	-	173	1	Intergenic	novelGene_1868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAAAATATCTCTA	NA	False	NA	NA	False	NA	NA	NA	80037409	80037236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80037200_80037400
Isoform_27094_11	chr11	-	181	1	Intergenic	novelGene_1347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTGCATTTGTTTAC	NA	False	NA	NA	False	NA	NA	NA	6330810	6330629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6330600_6330800
Isoform_27096_8	chr11	-	1152	1	Genic_Genomic	ENSMUSG00000086507.2	novel	NA	NA	NA	NA	-943	-18560	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGTGTGTGCTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	80069398	80068246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_80068200_80069400
Isoform_27097_35	chr11	-	163	1	Intergenic	novelGene_1869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	6871	False	NA	NA	False	NA	NA	NA	80074320	80074157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80074200_80074300
Isoform_27098_46	chr11	+	155	1	Intergenic	novelGene_1870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80080215	80080370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_80080200_80080400
Isoform_27099_6	chr11	-	217	1	Intergenic	novelGene_1348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTGCAGGGTCTGATA	NA	False	NA	NA	False	NA	NA	NA	6335239	6335022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6335000_6335200
Isoform_2710_4	chr10	-	1758	7	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	14976	2	-5106	-2	3prime_fragment	FALSE	canonical	3	10	junction_3	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCATTTTGTTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	76058695	76043062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282
Isoform_27101_3	chr11	-	2226	1	Intergenic	novelGene_1871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80123401	80121175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80121200_80123400
Isoform_27102_34	chr9	+	172	1	Intergenic	novelGene_11311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGTAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	57556257	57556429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57556300_57556400
Isoform_27104_23	chr11	-	187	1	Intergenic	novelGene_1872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80170661	80170474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80170500_80170700
Isoform_27105_16	chr11	+	176	1	Intergenic	novelGene_1873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATAGAGAGT	27	False	NA	NA	False	NA	NA	NA	80171512	80171688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_80171500_80171700
Isoform_27106_7	chr11	-	390	1	Intergenic	novelGene_1874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	80177408	80177018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80177000_80177400
Isoform_27108_4	chr1	+	180	1	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAATTGGT	NA	False	NA	NA	False	NA	NA	NA	62462631	62462811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_62462600_62462800
Isoform_2711_23	chr10	-	2007	11	FSM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	8	1	1	-1	multi-exon	FALSE	canonical	2	10	junction_3	2.63818119165458	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCATTTTGTTCTGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	76073663	76043061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072656_76073583
Isoform_27110_3	chr11	+	176	1	Intergenic	novelGene_1877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAAACTGAAAC	NA	False	NA	NA	False	NA	NA	NA	80236431	80236607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_80236400_80236600
Isoform_27114_7	chr11	+	185	1	Intergenic	novelGene_1878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGGAAGGAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	80269441	80269626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_80269400_80269600
Isoform_27115_5	chr11	-	248	1	Intergenic	novelGene_1879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80270168	80269920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80269900_80270200
Isoform_27117_53	chr11	-	179	1	Intergenic	novelGene_1349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATGTAAATACATAAGT	3128	False	NA	-2	True	NA	NA	NA	6364008	6363829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6363800_6364000
Isoform_27119_15	chr11	-	2451	1	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	80277321	80274870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_80274900_80277300
Isoform_2712_9	chr10	-	2027	11	FSM	ENSMUSG00000020230.16	ENSMUST00000099571.10	2052	11	18	7	-10	-2	multi-exon	FALSE	canonical	2	4	junction_10	3.8262252939418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCATTTTGTTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	76073681	76043062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072659_76073583
Isoform_27123_538	chr11	-	933	1	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	538	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80295105	80294172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_80294200_80295100
Isoform_27124_3	chr11	+	483	1	Genic_Genomic	ENSMUSG00000017421.19	novel	NA	NA	NA	NA	16259	139	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGTGTATGTGATAC	NA	False	NA	NA	False	AATAAA	-14	NA	80296215	80296698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_80296200_80296700
Isoform_27126_4	chr11	-	171	1	Intergenic	novelGene_1880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAGGAACAAG	NA	False	NA	NA	False	NA	NA	NA	80309732	80309561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80309600_80309700
Isoform_27127_823	chr11	-	176	1	Intergenic	novelGene_1881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	823	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTCCTCGAGA	NA	False	NA	-6	True	NA	NA	NA	80317445	80317269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80317300_80317400
Isoform_27131_10	chr11	-	177	1	Intergenic	novelGene_1882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGAGAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	80331778	80331601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80331600_80331800
Isoform_27132_3	chr11	-	160	1	Intergenic	novelGene_1883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGATTGTT	NA	False	NA	NA	False	NA	NA	NA	80334754	80334594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80334600_80334800
Isoform_27133_44	chr11	-	176	1	Intergenic	novelGene_1884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATGAG	NA	False	NA	NA	False	NA	NA	NA	80347500	80347324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80347300_80347500
Isoform_27137_159	chr11	-	175	1	Intergenic	novelGene_1885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTGTAT	NA	False	NA	NA	False	NA	NA	NA	80354849	80354674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80354700_80354800
Isoform_27139_42	chr11	-	210	1	Intergenic	novelGene_1887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGAGGGTCCTTTA	NA	False	NA	NA	False	AATGAA	-7	NA	80362124	80361914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80361900_80362100
Isoform_27142_51	chr11	-	175	1	Intergenic	novelGene_1888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80515176	80515001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80515000_80515200
Isoform_27144_48	chr11	-	178	1	Intergenic	novelGene_1889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	82591646	82591468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_82591500_82591600
Isoform_27145_5	chr11	+	181	1	Intergenic	novelGene_1890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTTTATAGTGG	NA	False	NA	NA	False	NA	NA	NA	82605064	82605245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_82605100_82605200
Isoform_27146_17	chr11	+	170	1	Intergenic	novelGene_1891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGATGTCAAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	82614808	82614978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_82614800_82615000
Isoform_27148_7	chr11	+	179	1	Intergenic	novelGene_1892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTCCTGGTTC	NA	False	NA	NA	False	NA	NA	NA	82631083	82631262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_82631100_82631300
Isoform_27149_87	chr11	+	1579	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	7	5	7	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGGATGGGTATTCT	NA	False	NA	NA	False	CATAAA	-16	NA	82655177	82656756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_82655200_82656800
Isoform_27152_48	chr11	+	2521	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	2	-932	2	932	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTTTAAACTGAAGAA	NA	False	NA	59	True	AATAAA	-12	NA	82655172	82657693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_82655200_82657700
Isoform_27159_18	chr11	-	175	1	Intergenic	novelGene_1893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAGAAACAGAT	NA	False	NA	NA	False	NA	NA	NA	82687655	82687480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_82687500_82687700
Isoform_27160_9	chr11	+	155	1	Intergenic	novelGene_1350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	8028	False	NA	NA	False	NA	NA	NA	6374268	6374423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_6374300_6374400
Isoform_27164_39	chr11	-	179	1	Intergenic	novelGene_1894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAAAAGATCA	9252	False	NA	NA	False	NA	NA	NA	82755527	82755348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_82755300_82755500
Isoform_27165_3	chr11	+	1633	2	Antisense	novelGene_ENSMUSG00000020696.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82756515	82758177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_82756634_82756662
Isoform_27166_3	chr11	-	169	1	Intergenic	novelGene_1895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82787067	82786898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_82786900_82787100
Isoform_27168_4	chr11	+	168	1	Intergenic	novelGene_1896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	82815503	82815671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_82815500_82815700
Isoform_27175_4	chr11	+	2930	1	FSM	ENSMUSG00000065715.3	ENSMUST00000083781.3	97	1	-2603	-230	-2603	230	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTATTTGTTTGGGTAA	5850	False	NA	8	True	ATTAAA	-17	NA	83182526	83185456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_83182500_83185500
Isoform_27176_19	chr11	-	164	1	Intergenic	novelGene_1897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAACAACAAAATAAAAA	8534	False	NA	NA	False	NA	NA	NA	83183660	83183496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_83183500_83183700
Isoform_27177_8	chr11	-	254	1	Intergenic	novelGene_1898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7659	False	NA	NA	False	NA	NA	NA	83184535	83184281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_83184300_83184500
Isoform_27179_40	chr11	+	196	1	Intergenic	novelGene_1293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACCAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3277888	3278084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_3277900_3278100
Isoform_27180_33	chr11	-	161	1	Intergenic	novelGene_1351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAAGTTCCAATTG	NA	False	NA	NA	False	NA	NA	NA	6379804	6379643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6379600_6379800
Isoform_27181_12	chr11	+	171	1	Intergenic	novelGene_1899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAAAAACT	4883	False	NA	NA	False	NA	NA	NA	83200419	83200590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_83200400_83200600
Isoform_27182_7	chr11	-	166	1	Intergenic	novelGene_1900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83239628	83239462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_83239500_83239600
Isoform_27185_3	chr11	+	3392	2	NNC	ENSMUSG00000020680.16	novel	848	9	NA	NA	-4	-5881	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAAAAATCTA	8675	False	NA	NA	False	NA	NA	NA	83363932	83367431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_+_83366185_83366291
Isoform_27187_4	chr11	-	1154	1	Intergenic	novelGene_1901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83382589	83381435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_83381400_83382600
Isoform_27192_3	chr11	+	1476	1	NIC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	-2	-630	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	4033	False	NA	NA	False	NA	NA	NA	83644537	83646013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_83644500_83646000
Isoform_27195_15	chr11	+	179	1	Intergenic	novelGene_1903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	83841535	83841714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_83841500_83841700
Isoform_27196_4	chr11	-	4788	1	Antisense	novelGene_ENSMUSG00000034940.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCCCAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	83931331	83926543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_83926500_83931300
Isoform_27197_9	chr11	+	2116	1	ISM	ENSMUSG00000034940.16	ENSMUST00000092834.12	7115	20	78032	3	15805	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGGTGTCTGTTCTGA	NA	False	NA	20	True	AATAAA	-30	NA	83933285	83935401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_83933300_83935400
Isoform_27198_18	chr11	+	210	1	Intergenic	novelGene_1904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTGTCTTAAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	83952971	83953181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_83953000_83953200
Isoform_27199_14	chr11	+	834	1	Intergenic	novelGene_1905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCAACCAACCAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	83991999	83992833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_83992000_83992800
Isoform_2720_4	chr10	-	9353	41	NIC	ENSMUSG00000001151.11	novel	9331	42	NA	NA	19	-2	intron_retention	FALSE	canonical	3	33	junction_11	46.6543071430709	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278601	76187098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76215996_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
Isoform_27200_8	chr11	+	1003	1	Intergenic	novelGene_1906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	83991999	83993002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_83992000_83993000
Isoform_27201_10	chr11	-	164	1	Intergenic	novelGene_1907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	84046622	84046458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_84046500_84046600
Isoform_27202_31	chr19	+	157	1	Intergenic	novelGene_5895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	51729149	51729306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_51729100_51729300
Isoform_27204_9	chr11	+	178	1	Intergenic	novelGene_1908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTCAA	1144	False	NA	NA	False	NA	NA	NA	84196747	84196925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84196700_84196900
Isoform_27205_6	chr11	-	2395	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	5917	7	5917	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACAGTCTTGTGCCCTT	NA	False	NA	-10	True	AATAAA	-16	NA	6420000	6417605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6417600_6420000
Isoform_27206_3	chr11	-	5184	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	3126	9	3126	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGACAGTCTTGTGCCC	NA	False	NA	-12	True	AATAAA	-14	NA	6422791	6417607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6417600_6422800
Isoform_27212_19	chr11	-	3991	1	FSM	ENSMUSG00000092885.4	ENSMUST00000175144.4	53	1	-3760	-178	-3760	178	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAAGTGGTAAATGTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	6426037	6422046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6422000_6426000
Isoform_27217_192	chr11	-	2617	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	-116	5818	-116	-5818	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCCTCTTCTATATTTTAA	NA	False	NA	-2	True	AATAAA	-19	NA	6426033	6423416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6423400_6426000
Isoform_27221_62	chr11	+	168	1	Intergenic	novelGene_1909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84401669	84401837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84401700_84401800
Isoform_27223_12	chr11	-	177	1	Intergenic	novelGene_1910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACTAATTTAGA	NA	False	NA	NA	False	NA	NA	NA	84565583	84565406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_84565400_84565600
Isoform_27224_21	chr11	+	181	1	Intergenic	novelGene_1911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAGGAACTTG	NA	False	NA	NA	False	NA	NA	NA	84606020	84606201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84606000_84606200
Isoform_27225_3	chr11	-	184	1	Intergenic	novelGene_1352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTACAAAACTAGAAAATGAC	NA	False	NA	NA	False	NA	NA	NA	6427898	6427714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6427700_6427900
Isoform_27229_16	chr11	+	1512	1	Antisense	novelGene_ENSMUSG00000018405.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCTCCAACTTATTT	NA	False	NA	8	True	NA	NA	NA	84709673	84711185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_84709700_84711200
Isoform_27232_20	chr11	+	761	1	Intergenic	novelGene_1912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGATCTTAAGGACAGATC	NA	False	NA	9	True	AATAAA	-24	NA	84761696	84762457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84761700_84762500
Isoform_27234_5	chr11	+	2231	1	Intergenic	novelGene_1913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84761753	84763984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84761800_84764000
Isoform_27237_46	chr6	+	179	1	Intergenic	novelGene_9507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93529366	93529545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_93529400_93529500
Isoform_27238_16	chr11	+	173	1	Intergenic	novelGene_1915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGCATT	NA	False	NA	NA	False	NA	NA	NA	84866540	84866713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84866500_84866700
Isoform_27239_14	chr11	+	168	1	Intergenic	novelGene_1916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATATTAAAAAAAATTGATA	NA	False	NA	NA	False	NA	NA	NA	84867928	84868096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84867900_84868100
Isoform_27243_6	chr11	+	162	1	Intergenic	novelGene_1917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCGGACCCGAAAAAACT	1227	False	NA	NA	False	NA	NA	NA	84946144	84946306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84946100_84946300
Isoform_27245_4	chr11	+	174	1	Intergenic	novelGene_1918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTTAAAAAAATTGA	NA	False	NA	NA	False	NA	NA	NA	84976140	84976314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84976100_84976300
Isoform_27246_7	chr11	-	3179	1	FSM	ENSMUSG00000064513.3	ENSMUST00000082579.3	133	1	-606	-2440	-606	2440	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGTTGATCGGGTTT	NA	False	NA	-3	True	NA	NA	NA	6478771	6475592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_6475600_6478800
Isoform_27247_35	chr11	+	178	1	Intergenic	novelGene_1919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	84988781	84988959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_84988800_84989000
Isoform_27250_7	chr11	+	195	1	Intergenic	novelGene_1920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTAAGCTCCATGAATGT	NA	False	NA	NA	False	NA	NA	NA	85056603	85056798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_85056600_85056800
Isoform_27253_172	chr9	-	178	1	Intergenic	novelGene_11489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75348270	75348092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_75348100_75348300
Isoform_27254_17	chr11	-	200	1	Intergenic	novelGene_1921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGAAGCTGTGCTGCA	5511	False	NA	NA	False	NA	NA	NA	85077970	85077770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_85077800_85078000
Isoform_27272_13	chr11	+	179	1	Intergenic	novelGene_1922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACATTAG	NA	False	NA	NA	False	NA	NA	NA	85084208	85084387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_85084200_85084400
Isoform_27273_22	chr11	-	174	1	Intergenic	novelGene_1923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	136	False	NA	NA	False	NA	NA	NA	85093988	85093814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_85093800_85094000
Isoform_27276_3	chr11	+	4478	1	Intergenic	novelGene_1924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCACTGACTGCTCTTCC	7113	False	NA	NA	False	NA	NA	NA	85118196	85122674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_85118200_85122700
Isoform_27277_6	chr11	-	2329	1	Intergenic	novelGene_1925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4457	False	NA	NA	False	NA	NA	NA	85135498	85133169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_85133200_85135500
Isoform_27282_7	chr11	-	176	1	Intergenic	novelGene_1926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85161290	85161114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_85161100_85161300
Isoform_27283_4	chr11	+	235	1	Intergenic	novelGene_1927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGGTTTTATTTTTTAT	2776	False	NA	NA	False	NA	NA	NA	85173876	85174111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_85173900_85174100
Isoform_27285_35	chr11	-	177	1	Intergenic	novelGene_1928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85191347	85191170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_85191200_85191300
Isoform_27287_4	chr11	+	1318	1	NIC	ENSMUSG00000020525.18	novel	2899	6	NA	NA	24	-24618	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTGTGTGTGGGAT	7730	False	NA	NA	False	ATTAAA	-33	NA	85202093	85203411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_85202100_85203400
Isoform_27288_9	chr11	-	3332	2	Antisense	novelGene_ENSMUSG00000000378.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6507145	6503780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_6504047_6504079
Isoform_27289_6	chr11	-	173	1	Intergenic	novelGene_1929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTAGATTTGT	NA	False	NA	NA	False	NA	NA	NA	85214556	85214383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_85214400_85214600
Isoform_27290_38	chr11	-	175	1	Intergenic	novelGene_1930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACACTTTTC	NA	False	NA	NA	False	NA	NA	NA	85261619	85261444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_85261400_85261600
Isoform_27291_87	chr11	+	208	1	Intergenic	novelGene_1931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	85393982	85394190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_85394000_85394200
Isoform_27293_3	chr11	-	176	1	Intergenic	novelGene_1932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCCTCATCATT	NA	False	NA	NA	False	NA	NA	NA	85679190	85679014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_85679000_85679200
Isoform_27295_43	chr11	+	163	1	Intergenic	novelGene_1933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTAGTGATCA	9873	False	NA	NA	False	NA	NA	NA	85749829	85749992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_85749800_85750000
Isoform_27298_3	chr11	+	153	1	Intergenic	novelGene_1934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	85935017	85935170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_85935000_85935200
Isoform_27300_21	chr11	+	2521	1	Intergenic	novelGene_1935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85976208	85978729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_85976200_85978700
Isoform_27301_19	chr11	+	180	1	Intergenic	novelGene_1936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTATAAACCATC	NA	False	NA	NA	False	NA	NA	NA	86007344	86007524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_86007300_86007500
Isoform_27303_16	chr11	-	1297	1	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	15831	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	86104228	86102931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_86102900_86104200
Isoform_27304_5	chr11	-	175	1	Intergenic	novelGene_1938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	86122121	86121946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86121900_86122100
Isoform_27305_6	chr11	-	190	1	Intergenic	novelGene_1939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATAGTAAAAAAATATC	NA	False	NA	NA	False	NA	NA	NA	86145915	86145725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86145700_86145900
Isoform_27310_3	chr11	-	3643	1	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	86927	0	7925	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTGTCTCATTCTGT	NA	False	NA	0	True	AATAAA	-18	NA	86161501	86157858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_86157900_86161500
Isoform_27311_4	chr11	+	2811	1	Genic_Genomic	ENSMUSG00000085208.4	novel	NA	NA	NA	NA	102249	1999	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86194457	86197268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_86194500_86197300
Isoform_27312_4	chr11	-	175	1	Intergenic	novelGene_1940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGTAATTGTGTAT	7835	False	NA	NA	False	NA	NA	NA	86293328	86293153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86293200_86293300
Isoform_27314_3	chr11	-	442	1	Intergenic	novelGene_1941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGATACTACAAGGA	NA	False	NA	NA	False	AATAAA	-14	NA	86375264	86374822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86374800_86375300
Isoform_27316_49	chr11	+	169	1	Intergenic	novelGene_1942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACTAT	NA	False	NA	NA	False	NA	NA	NA	86428130	86428299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_86428100_86428300
Isoform_27317_26	chr11	+	171	1	Intergenic	novelGene_1943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	86429293	86429464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_86429300_86429500
Isoform_27321_12	chr11	-	174	1	Intergenic	novelGene_1944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAAGCTG	5692	False	NA	NA	False	NA	NA	NA	86479564	86479390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86479400_86479600
Isoform_27322_14	chr11	-	199	1	Intergenic	novelGene_1945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTTTATTTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	86516257	86516058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86516100_86516300
Isoform_27330_17	chr11	-	347	1	Intergenic	novelGene_1946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	86551358	86551011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86551000_86551400
Isoform_27331_13	chr17	+	179	1	Intergenic	novelGene_4934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACCAC	NA	False	NA	NA	False	NA	NA	NA	35680858	35681037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35680900_35681000
Isoform_27340_23	chr11	-	161	1	Intergenic	novelGene_1353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	6579323	6579162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_6579200_6579300
Isoform_27341_3	chr11	+	613	1	Intergenic	novelGene_1947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACCAAAACA	907	False	NA	NA	False	NA	NA	NA	86600975	86601588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_86601000_86601600
Isoform_27344_13	chr11	-	175	1	Intergenic	novelGene_1948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAAGAGTGAATA	5393	False	NA	NA	False	NA	NA	NA	86678587	86678412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86678400_86678600
Isoform_27345_5	chr11	-	301	1	Intergenic	novelGene_1949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAGAGTGGATG	7417	False	NA	NA	False	NA	NA	NA	86687942	86687641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86687600_86687900
Isoform_27349_8	chr11	-	171	1	Intergenic	novelGene_1950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAAAAAAAGAAACGG	NA	False	NA	NA	False	NA	NA	NA	86769200	86769029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86769000_86769200
Isoform_27353_6	chr11	-	198	1	Intergenic	novelGene_1951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGATCCTTGTTTC	2217	False	NA	NA	False	NA	NA	NA	86873759	86873561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86873600_86873800
Isoform_27354_5	chr11	-	2039	1	Genic_Genomic	ENSMUSG00000018427.9	novel	NA	NA	NA	NA	-15	-51085	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86884548	86882509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_86882500_86884500
Isoform_27357_75	chr11	-	236	1	Intergenic	novelGene_1952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTCCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	86914201	86913965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86914000_86914200
Isoform_27358_11	chr11	-	185	1	Intergenic	novelGene_1953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACTCCCACAGTGACAC	NA	False	NA	NA	False	NA	NA	NA	86952284	86952099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86952100_86952300
Isoform_27362_11	chr4	+	174	1	Intergenic	novelGene_7962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	132042697	132042871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132042700_132042900
Isoform_27363_3	chr11	+	929	1	NIC	ENSMUSG00000020492.12	novel	3037	4	NA	NA	30	-11898	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATACCAAGAT	NA	False	NA	NA	False	NA	NA	NA	87000106	87001035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87000100_87001000
Isoform_27364_3	chr11	+	1258	1	FSM	ENSMUSG00000065589.3	ENSMUST00000083655.3	86	1	75	-1247	75	1247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACGTGGCCATAATTTCT	NA	False	NA	NA	False	NA	NA	NA	87003904	87005162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87003900_87005200
Isoform_27369_62	chr11	-	177	1	Intergenic	novelGene_1955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7333	False	NA	NA	False	NA	NA	NA	87027076	87026899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87026900_87027100
Isoform_2737_29	chr10	-	9282	41	NIC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	73	junction_29	43.2194328398696	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278584	76187098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
Isoform_27370_8	chr11	-	1786	1	Intergenic	novelGene_1956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9860	False	NA	NA	False	NA	NA	NA	87036061	87034275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87034300_87036100
Isoform_27373_100	chr11	+	175	1	Intergenic	novelGene_1957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	87085467	87085642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87085500_87085600
Isoform_27374_3	chr11	-	3343	1	Antisense	novelGene_ENSMUSG00000018548.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCAAAAAAAAACGGGT	NA	False	NA	NA	False	NA	NA	NA	87111204	87107861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_87107900_87111200
Isoform_27376_73	chr11	-	186	1	Intergenic	novelGene_1958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATGTGGGAGGGGCC	NA	False	NA	-10	True	NA	NA	NA	87226232	87226046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87226000_87226200
Isoform_27377_4	chr11	-	1834	1	Genic_Genomic	ENSMUSG00000046442.5	novel	NA	NA	NA	NA	-30	-114155	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCATTAATGGTTGAGT	NA	False	NA	NA	False	AATAAA	-30	NA	87249879	87248045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_87248000_87249900
Isoform_27378_13	chr11	-	266	1	Intergenic	novelGene_1959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTAGAGCTTAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	87260223	87259957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87260000_87260200
Isoform_27379_25	chr11	-	199	1	Intergenic	novelGene_1960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACCCAACACGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	87260223	87260024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87260000_87260200
Isoform_2738_7	chr10	-	9236	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	25	-2	intron_retention	FALSE	canonical	3	35	junction_29	45.1796345160073	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278535	76187098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
Isoform_27380_22	chr11	+	169	1	Intergenic	novelGene_1961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAATAAAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87275875	87276044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87275900_87276000
Isoform_27382_4	chr11	+	173	1	Intergenic	novelGene_1962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	87287819	87287992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87287800_87288000
Isoform_27383_8	chr11	-	175	1	Intergenic	novelGene_1963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAGAGAGAGA	-2	True	NA	NA	False	NA	NA	NA	87294056	87293881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87293900_87294100
Isoform_27386_5	chr11	-	304	1	Intergenic	novelGene_1964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCTTTTTTACATTT	2254	False	NA	NA	False	NA	NA	NA	87322813	87322509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87322500_87322800
Isoform_27387_30	chr11	-	195	1	Intergenic	novelGene_1965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATGCATACCTTCCCA	2253	False	NA	NA	False	NA	NA	NA	87322814	87322619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87322600_87322800
Isoform_27388_3	chr11	+	191	1	Intergenic	novelGene_1966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTAGATTGCAA	NA	False	NA	NA	False	NA	NA	NA	87322983	87323174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87323000_87323200
Isoform_27389_211	chr11	+	173	1	Intergenic	novelGene_1967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTTTTTAAATTAGG	NA	False	NA	NA	False	NA	NA	NA	87323495	87323668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87323500_87323700
Isoform_27391_18	chr11	+	166	1	Intergenic	novelGene_1968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	87326157	87326323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87326200_87326300
Isoform_27392_4	chr11	+	1124	1	FSM	ENSMUSG00002076650.1	ENSMUST00020182758.1	216	1	76	-984	76	984	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAATA	2495	False	NA	NA	False	NA	NA	NA	87334138	87335262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_87334100_87335300
Isoform_27393_4	chr11	-	232	1	Intergenic	novelGene_1969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGCCGTCTGTATATC	6294	False	NA	NA	False	NA	NA	NA	87336583	87336351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87336400_87336600
Isoform_27395_58	chr11	-	384	1	Intergenic	novelGene_1970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	87343740	87343356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87343400_87343700
Isoform_27398_10	chr11	+	174	1	Genic_Genomic	ENSMUSG00000083894.2	novel	NA	NA	NA	NA	1377	171	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAATGCAGGG	NA	False	NA	NA	False	NA	NA	NA	87359881	87360055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_87359900_87360100
Isoform_2740_7	chr10	-	9343	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-22	-2	intron_retention	FALSE	canonical	3	35	junction_29	45.1796345160073	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278642	76187098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
Isoform_27400_13	chr11	-	6049	1	Intergenic	novelGene_1972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87372209	87366160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87366200_87372200
Isoform_27401_13	chr11	-	5012	1	Intergenic	novelGene_1973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCTGTCTTAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	87373797	87368785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87368800_87373800
Isoform_27405_28	chr11	-	178	1	Intergenic	novelGene_1974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGGTTTTT	7443	False	NA	-4	True	NA	NA	NA	87397044	87396866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87396900_87397000
Isoform_27409_5	chr11	-	176	1	Intergenic	novelGene_1975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGATATTATGATGA	NA	False	NA	NA	False	NA	NA	NA	87518937	87518761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87518800_87518900
Isoform_2741_3	chr10	-	9521	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-28	-1	intron_retention	TRUE	canonical	3	21	junction_9	49.118421951443	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76278588	76187097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210453_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
Isoform_27410_7	chr11	+	527	1	NIC	ENSMUSG00000084796.2	novel	269	2	NA	NA	0	-1167	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87646402	87646929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_87646400_87646900
Isoform_27412_7	chr11	-	176	1	Intergenic	novelGene_1976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGATTGACTGATTT	9209	False	NA	NA	False	NA	NA	NA	87791891	87791715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87791700_87791900
Isoform_27415_214	chr11	-	175	1	Intergenic	novelGene_1977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGGAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	87864573	87864398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87864400_87864600
Isoform_2742_3	chr10	-	4115	20	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	2291	2416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	29.2333244366379	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAAAGGTAGAGTTCC	NA	False	NA	NA	False	AAGAAA	-9	NA	76276269	76237175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248330_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976
Isoform_27421_6	chr11	+	184	1	Intergenic	novelGene_1978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTAAAAAAAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	87884370	87884554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87884400_87884600
Isoform_27424_5	chr11	-	158	1	Intergenic	novelGene_1979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAAAAAGCCTGGTTGA	NA	False	NA	NA	False	NA	NA	NA	87929009	87928851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_87928900_87929000
Isoform_27425_7	chr11	+	176	1	Intergenic	novelGene_1980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	87929737	87929913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_87929700_87929900
Isoform_27426_200	chr2	-	162	1	Intergenic	novelGene_6688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAAATACA	NA	False	NA	NA	False	NA	NA	NA	156030206	156030044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_156030000_156030200
Isoform_27431_4	chr11	-	1783	1	Genic_Genomic	ENSMUSG00000086193.2	novel	NA	NA	NA	NA	-1567	-35800	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGGCCTT	NA	False	NA	NA	False	NA	NA	NA	87940399	87938616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_87938600_87940400
Isoform_27432_4	chr11	-	5034	1	Genic_Genomic	ENSMUSG00000086193.2	novel	NA	NA	NA	NA	-4826	-35808	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87943658	87938624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_87938600_87943700
Isoform_27462_15	chr11	+	172	1	Intergenic	novelGene_1982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAACATATCCCCAT	4889	False	NA	NA	False	NA	NA	NA	88104186	88104358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_88104200_88104400
Isoform_27469_4	chr11	-	3628	1	ISM	ENSMUSG00000069769.14	ENSMUST00000107909.8	6436	14	375220	0	247138	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTAGTGTTCTTGTGT	1412	False	NA	-1	True	AATAAA	-20	NA	88233835	88230207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_88230200_88233800
Isoform_27470_3	chr11	-	4555	1	ISM	ENSMUSG00000069769.14	ENSMUST00000107909.8	6436	14	374292	1	246210	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTAGTGTTCTTGTG	484	False	NA	-2	True	AATAAA	-19	NA	88234763	88230208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_88230200_88234800
Isoform_27471_5	chr11	-	3488	1	ISM	ENSMUSG00000069769.14	ENSMUST00000107909.8	6436	14	375355	5	247273	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTTGTTTAGTGTTCT	1547	False	NA	-6	True	AATAAA	-15	NA	88233700	88230212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_88230200_88233700
Isoform_27475_136	chr11	+	176	1	Intergenic	novelGene_1983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGAGAGAGAATA	NA	False	NA	NA	False	NA	NA	NA	88492371	88492547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_88492400_88492500
Isoform_27476_17	chr11	+	186	1	Intergenic	novelGene_1984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGTGACACAACT	NA	False	NA	NA	False	NA	NA	NA	88590562	88590748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_88590600_88590700
Isoform_27477_4	chr11	-	174	1	Intergenic	novelGene_1985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	88719020	88718846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_88718800_88719000
Isoform_27480_5	chr11	+	1740	1	Antisense	novelGene_ENSMUSG00000018428.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCCACTCTCCACCC	3463	False	NA	NA	False	NA	NA	NA	88731531	88733271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_88731500_88733300
Isoform_27481_5	chr11	+	6541	1	Antisense	novelGene_ENSMUSG00000018428.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6877	False	NA	NA	False	NA	NA	NA	88734945	88741486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_88734900_88741500
Isoform_27482_16	chr11	-	175	1	Intergenic	novelGene_1986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTTTTTAAACC	NA	False	NA	NA	False	NA	NA	NA	88765030	88764855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_88764900_88765000
Isoform_27490_4	chr11	+	1043	1	Antisense	novelGene_ENSMUSG00000000278.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	88815367	88816410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_88815400_88816400
Isoform_27492_6	chr11	+	160	1	Intergenic	novelGene_1987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88842659	88842819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_88842700_88842800
Isoform_27493_384	chr11	-	176	1	Intergenic	novelGene_1988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	88852778	88852602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_88852600_88852800
Isoform_27494_6	chr11	-	181	1	Intergenic	novelGene_1989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAAACAA	9395	False	NA	NA	False	NA	NA	NA	88854432	88854251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_88854300_88854400
Isoform_27501_116	chr9	+	177	1	ISM	ENSMUSG00000096356.4	ENSMUST00000217286.2	5673	2	2431	3440	1937	1078	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38028924	38029101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr9_+_38028900_38029100
Isoform_27506_8	chr11	+	178	1	Intergenic	novelGene_1991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTGTGTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	88888199	88888377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_88888200_88888400
Isoform_27508_14	chr11	+	1709	1	NIC	ENSMUSG00000000275.17	novel	1433	5	NA	NA	27	-12591	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88890228	88891937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_88890200_88891900
Isoform_27511_12	chr11	+	3852	1	ISM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	17055	11	17055	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATAAGTGCGACATTGT	1325	False	NA	13	True	NA	NA	NA	88907256	88911108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_88907300_88911100
Isoform_27519_16	chr11	+	3037	1	Genic_Genomic	ENSMUSG00000000275.17	novel	NA	NA	NA	NA	17882	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTGTCCTGCCTTTTGC	2152	False	NA	25	True	NA	NA	NA	88908083	88911120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_88908100_88911100
Isoform_27542_6	chr11	-	329	1	Intergenic	novelGene_1992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	88936512	88936183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_88936200_88936500
Isoform_27544_6	chr11	-	2491	1	NIC	ENSMUSG00000000276.12	novel	8347	12	NA	NA	164	-18874	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	3996	False	NA	NA	False	NA	NA	NA	88951410	88948919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_88948900_88951400
Isoform_27546_9	chr11	-	189	1	Intergenic	novelGene_1993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATTATATAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	88968017	88967828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_88967800_88968000
Isoform_27547_8	chr11	+	154	1	Antisense	novelGene_ENSMUSG00000086919.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAAAGAAGCA	551	False	NA	NA	False	NA	NA	NA	89016093	89016247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_89016100_89016200
Isoform_27549_19	chr11	-	177	1	Intergenic	novelGene_1994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATAG	NA	False	NA	NA	False	NA	NA	NA	89644223	89644046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_89644000_89644200
Isoform_2755_39	chr10	-	4233	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	288	1	37	-1	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGTCTCTCGTGATTCC	NA	False	NA	NA	False	NA	NA	NA	76304660	76295401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
Isoform_27550_30	chr11	-	167	1	Intergenic	novelGene_1995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAAGTACTCT	NA	False	NA	NA	False	NA	NA	NA	90240794	90240627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_90240600_90240800
Isoform_27554_10	chr11	+	4561	1	Genic_Genomic	ENSMUSG00000020544.15	novel	NA	NA	NA	NA	-16	-1944	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90528982	90533543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_90529000_90533500
Isoform_27557_11	chr11	+	1589	1	Antisense	novelGene_ENSMUSG00000020541.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGGAAAAAAAAAAAAAAAA	4312	False	NA	NA	False	NA	NA	NA	90553167	90554756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_90553200_90554800
Isoform_27561_12	chr11	-	174	1	Intergenic	novelGene_1996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAGAGAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	91437886	91437712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_91437700_91437900
Isoform_27564_6	chr11	-	178	1	Intergenic	novelGene_1997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAACAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	92464848	92464670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_92464700_92464800
Isoform_27565_8	chr11	-	169	1	Intergenic	novelGene_1998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGATTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93779032	93778863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_93778900_93779000
Isoform_27584_33	chr11	+	183	1	Intergenic	novelGene_1354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAATCTGCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	8540204	8540387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_8540200_8540400
Isoform_27585_16	chr11	+	173	1	Intergenic	novelGene_1999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTCAAGT	NA	False	NA	NA	False	NA	NA	NA	94093684	94093857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_94093700_94093900
Isoform_2759_3	chr10	-	2386	4	NIC	ENSMUSG00000033126.6	novel	4522	5	NA	NA	37	-1618	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	13.7679176187089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTATATGAGTACAC	NA	False	NA	NA	False	NA	NA	NA	76304660	76297018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_76299154_76300090_76300160_76302070_76302200_76304607
Isoform_27592_5	chr5	+	406	4	Intergenic	novelGene_9096	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGATATGGGGGATGG	5910	False	NA	NA	False	AGTAAA	-8	NA	142915897	142941164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142916086_142919723_142919754_142930667_142930828_142941136
Isoform_27594_8	chr11	+	177	1	Intergenic	novelGene_2001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	1141	False	NA	NA	False	NA	NA	NA	94215973	94216150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_94216000_94216200
Isoform_27597_109	chr11	+	178	1	Intergenic	novelGene_2002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATTCTCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	94293082	94293260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_94293100_94293300
Isoform_27598_8	chr11	-	177	1	Intergenic	novelGene_2003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGTTAATTTA	6686	False	NA	NA	False	NA	NA	NA	94436590	94436413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_94436400_94436600
Isoform_2760_5	chr10	-	364	2	ISM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	252	8545	1	-747	5prime_fragment	FALSE	canonical	3	38	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTTCTTCTCGTACAG	NA	False	NA	NA	False	NA	NA	NA	76304696	76303945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_76304221_76304607
Isoform_27619_7	chr11	-	179	1	Intergenic	novelGene_2004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGAGATGAATTAGT	NA	False	NA	NA	False	NA	NA	NA	94571108	94570929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_94570900_94571100
Isoform_27621_6	chr11	+	176	1	Intergenic	novelGene_1355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	8583686	8583862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_8583700_8583900
Isoform_27623_39	chr11	+	187	1	Intergenic	novelGene_2005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATAAAAAATAAAGAAAGAA	7524	False	NA	NA	False	NA	NA	NA	94749654	94749841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_94749700_94749800
Isoform_27625_19	chr11	+	171	1	Intergenic	novelGene_2006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGCCGG	NA	False	NA	NA	False	NA	NA	NA	94799485	94799656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_94799500_94799700
Isoform_27626_30	chr11	+	166	1	Intergenic	novelGene_2007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTCTTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94860787	94860953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_94860800_94861000
Isoform_27628_470	chr15	-	175	1	Intergenic	novelGene_3768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	470	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAAACC	NA	False	NA	NA	False	NA	NA	NA	8835156	8834981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_8835000_8835200
Isoform_27629_9	chr11	+	177	1	Intergenic	novelGene_2009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAGTTAACAATA	3591	False	NA	NA	False	NA	NA	NA	95001502	95001679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95001500_95001700
Isoform_2763_83	chr10	-	3950	34	NIC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	140	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	12.3589563334811	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCTCTTTATCTAC	8582	False	NA	-1	True	AATAAA	-14	NA	76561862	76544626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556840_76556921_76556943_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
Isoform_27638_3	chr11	+	174	1	Intergenic	novelGene_2010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	95178947	95179121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95178900_95179100
Isoform_27639_3	chr11	+	176	1	Intergenic	novelGene_2011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAAGAGGGC	NA	False	NA	NA	False	NA	NA	NA	95186953	95187129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95187000_95187100
Isoform_27641_3	chr11	+	775	1	Genic_Genomic	ENSMUSG00000085143.2	novel	NA	NA	NA	NA	-103	-13396	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAATTAAGACTAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	95201151	95201926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_95201200_95201900
Isoform_27643_36	chr11	-	177	1	Intergenic	novelGene_2012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCCATCCA	NA	False	NA	NA	False	NA	NA	NA	95203397	95203220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95203200_95203400
Isoform_27644_4	chr11	+	170	1	Intergenic	novelGene_2013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGTTATTTGTGT	NA	False	NA	NA	False	NA	NA	NA	95221868	95222038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95221900_95222000
Isoform_27645_87	chr11	+	169	1	Intergenic	novelGene_2014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95273455	95273624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95273500_95273600
Isoform_27646_7	chr11	-	1873	1	Antisense	novelGene_ENSMUSG00000020873.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTCAAGACA	NA	False	NA	NA	False	NA	NA	NA	95278250	95276377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_95276400_95278200
Isoform_27647_11	chr11	-	172	1	Intergenic	novelGene_1356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATCCAG	2043	False	NA	NA	False	NA	NA	NA	8622866	8622694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_8622700_8622900
Isoform_27649_17	chr11	+	245	1	Intergenic	novelGene_2015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTACTCAGAGCCAGAC	1325	False	NA	NA	False	NA	NA	NA	95311646	95311891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95311600_95311900
Isoform_2765_4	chr10	-	3668	33	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	2452	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.948811273277	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCTCTTTATCTAC	NA	False	NA	-1	True	AATAAA	-14	NA	76559550	76544626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556840_76556921_76556943_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76559493
Isoform_27651_31	chr11	+	176	1	Intergenic	novelGene_2016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	95330720	95330896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95330700_95330900
Isoform_27652_66	chr11	-	165	1	Intergenic	novelGene_2017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCTTTAA	NA	False	NA	NA	False	NA	NA	NA	95437346	95437181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95437200_95437300
Isoform_27653_30	chr11	+	174	1	Intergenic	novelGene_2018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAGAGCGAGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	95500473	95500647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95500500_95500600
Isoform_27654_50	chr11	-	183	1	Intergenic	novelGene_2019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	95540856	95540673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95540700_95540900
Isoform_27655_43	chr11	+	205	1	Intergenic	novelGene_2020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAGAGAAAATGATCTC	NA	False	NA	NA	False	NA	NA	NA	95546499	95546704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95546500_95546700
Isoform_2766_8	chr10	-	3032	26	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	-76	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.0116754561241	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCTCTTTATCTAC	NA	False	NA	-1	True	AATAAA	-14	NA	76555146	76544626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555094
Isoform_27660_17	chr11	+	180	1	Intergenic	novelGene_2021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	95591982	95592162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95592000_95592200
Isoform_27661_12	chr11	-	301	1	Intergenic	novelGene_2022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGACATTTGAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	95599885	95599584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95599600_95599900
Isoform_27663_11	chr11	-	176	1	Intergenic	novelGene_2023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	95630331	95630155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95630200_95630300
Isoform_27665_4	chr11	+	3925	1	ISM	ENSMUSG00000075595.10	ENSMUST00000107717.8	10433	6	55754	2	19360	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCACGTGTCTTCTCT	NA	False	NA	7	True	AGTAAA	-17	NA	95659252	95663177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_95659300_95663200
Isoform_27668_5	chr11	+	1513	1	ISM	ENSMUSG00000075595.10	ENSMUST00000107717.8	10433	6	58165	3	21771	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCCCACGTGTCTTCTC	NA	False	NA	6	True	AGTAAA	-16	NA	95661663	95663176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_95661700_95663200
Isoform_2767_119	chr10	-	2117	16	NIC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	23.7172229965202	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGACTTCTCTCTGC	1130	False	NA	-2	True	AATAAA	-19	NA	76797728	76597689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
Isoform_27670_5	chr11	+	160	1	Intergenic	novelGene_2024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCTTAAAA	6244	False	NA	NA	False	NA	NA	NA	95673241	95673401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95673200_95673400
Isoform_27671_49	chr11	-	188	1	Intergenic	novelGene_2025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCCTGTGGATC	NA	False	NA	NA	False	NA	NA	NA	95676006	95675818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95675800_95676000
Isoform_27672_185	chr8	-	176	1	Intergenic	novelGene_10674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	66227216	66227040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_66227000_66227200
Isoform_27673_26	chr11	+	2551	1	Intergenic	novelGene_2027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGATGGAGTCAT	6425	False	NA	NA	False	NA	NA	NA	95776180	95778731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95776200_95778700
Isoform_27675_9	chr11	-	180	1	Intergenic	novelGene_2029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAACAAAACATTT	NA	False	NA	NA	False	NA	NA	NA	95781585	95781405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95781400_95781600
Isoform_27676_3	chr11	-	175	1	Intergenic	novelGene_2030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	95784550	95784375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95784400_95784600
Isoform_27677_339	chr11	-	234	1	Intergenic	novelGene_2031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTTTCTCTCTATGG	8694	False	NA	NA	False	NA	NA	NA	95823118	95822884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95822900_95823100
Isoform_27678_5	chr11	+	161	1	Intergenic	novelGene_2032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAGCAATCAGGGAC	4061	False	NA	NA	False	NA	NA	NA	95829291	95829452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95829300_95829500
Isoform_2768_4	chr10	-	2231	16	NIC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	33.9616777494216	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	1087	False	NA	-3	True	AATAAA	-18	NA	76797771	76597690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620904_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
Isoform_27682_8	chr11	-	171	1	Intergenic	novelGene_2033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAAAAAGC	274	False	NA	NA	False	NA	NA	NA	95842194	95842023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95842000_95842200
Isoform_27686_13	chr11	-	4651	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	44125	2	6020	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTGTGTCTGTGCT	NA	False	NA	-7	True	AATAAA	-17	NA	95852641	95847990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_95848000_95852600
Isoform_2769_68	chr10	-	2163	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-149	-1	-50	1	multi-exon	FALSE	canonical	3	60	junction_5	18.4407760742931	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGACTTCTCTCTGC	1087	False	NA	-2	True	AATAAA	-19	NA	76797771	76597689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
Isoform_2770_138	chr10	-	2120	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-106	-1	-7	1	multi-exon	FALSE	canonical	3	60	junction_5	18.4407760742931	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGACTTCTCTCTGC	1130	False	NA	-2	True	AATAAA	-19	NA	76797728	76597689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
Isoform_27709_23	chr11	-	2329	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	46446	3	8341	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTGTGTCTGTGC	NA	False	NA	-8	True	AATAAA	-16	NA	95850320	95847991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_95848000_95850300
Isoform_27714_23	chr11	-	2832	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	45944	2	7839	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTGTGTCTGTGCT	NA	False	NA	-7	True	AATAAA	-17	NA	95850822	95847990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_95848000_95850800
Isoform_27718_23	chr11	-	3171	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	45605	2	7500	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTGTGTCTGTGCT	NA	False	NA	-7	True	AATAAA	-17	NA	95851161	95847990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_95848000_95851200
Isoform_27719_19	chr11	-	3201	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	45574	3	7469	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTGTGTCTGTGC	NA	False	NA	-8	True	AATAAA	-16	NA	95851192	95847991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_95848000_95851200
Isoform_2772_6	chr10	-	2108	15	NIC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	33.6886252225845	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	1081	False	NA	-3	True	AATAAA	-18	NA	76797777	76597690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
Isoform_27728_16	chr11	-	4325	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	44450	3	6345	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTGTGTCTGTGC	NA	False	NA	-8	True	AATAAA	-16	NA	95852316	95847991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_95848000_95852300
Isoform_2773_6	chr10	-	1236	11	ISM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-137	19857	-38	8089	5prime_fragment	FALSE	canonical	3	104	junction_6	11.0742945599257	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCTACGTCTGTTGT	1099	False	NA	NA	False	NA	NA	NA	76797759	76617547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
Isoform_27733_10	chr11	-	5260	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	43515	3	5410	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTGTGTCTGTGC	NA	False	NA	-8	True	AATAAA	-16	NA	95853251	95847991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_95848000_95853300
Isoform_27744_8	chr11	+	2902	1	Antisense	novelGene_ENSMUSG00000013415.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGGTG	4347	False	NA	NA	False	NA	NA	NA	95848217	95851119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_95848200_95851100
Isoform_27769_5	chr11	+	1804	1	Antisense	novelGene_ENSMUSG00000093358.3_AS_novelGene_ENSMUSG00000013415.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAAGGTGGC	NA	False	NA	NA	False	NA	NA	NA	95853891	95855695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_95853900_95855700
Isoform_27772_3	chr11	+	298	1	Intergenic	novelGene_2034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95875927	95876225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95875900_95876200
Isoform_27775_3	chr11	+	527	1	Genic_Genomic	ENSMUSG00000099928.2	novel	NA	NA	NA	NA	-431	-2071	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATGGAGC	NA	False	NA	NA	False	AATAAA	-11	NA	95896283	95896810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_95896300_95896800
Isoform_27777_4	chr11	+	2415	1	Genic_Genomic	ENSMUSG00000099928.2	novel	NA	NA	NA	NA	1370	1618	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAGGAAAAATTTCTCT	NA	False	NA	NA	False	NA	NA	NA	95898084	95900499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_95898100_95900500
Isoform_27778_117	chr4	-	177	1	Intergenic	novelGene_7879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	125974064	125973887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_125973900_125974100
Isoform_27780_5	chr11	+	272	1	Intergenic	novelGene_2035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAACAATTTTAAA	NA	False	NA	NA	False	TATAAA	-31	NA	95904847	95905119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95904800_95905100
Isoform_27781_21	chr11	-	175	1	Intergenic	novelGene_2036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAATAGATAGATA	NA	False	NA	NA	False	NA	NA	NA	95927060	95926885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95926900_95927100
Isoform_27807_4	chr11	+	335	1	Intergenic	novelGene_2038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAGAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	95946220	95946555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95946200_95946600
Isoform_27810_77	chr11	-	172	1	ISM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	6631	16	5998	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGCTTTAAAATATC	6589	False	NA	NA	False	NA	NA	NA	95959865	95959693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_95959700_95959900
Isoform_27813_28	chr11	-	176	1	Intergenic	novelGene_2039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATTTCAGTAAGAGTAA	661	False	NA	NA	False	NA	NA	NA	95969314	95969138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95969100_95969300
Isoform_27815_23	chr11	-	172	1	Intergenic	novelGene_2040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	95982802	95982630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95982600_95982800
Isoform_27816_19	chr11	-	177	1	Intergenic	novelGene_2041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	95983451	95983274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95983300_95983500
Isoform_27817_37	chr11	+	177	1	Intergenic	novelGene_2042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	95984635	95984812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_95984600_95984800
Isoform_27823_32	chr11	-	174	1	Intergenic	novelGene_2043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	96125194	96125020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_96125000_96125200
Isoform_27824_84	chr11	-	176	1	Intergenic	novelGene_2044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGATTCCCTGGAT	8395	False	NA	-3	True	NA	NA	NA	96139248	96139072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_96139100_96139200
Isoform_27828_7	chr11	+	3353	1	NIC	ENSMUSG00000078706.5	novel	1172	3	NA	NA	-53	-6750	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTCTCTCAAAAGTTA	8761	False	NA	NA	False	NA	NA	NA	96142416	96145769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_96142400_96145800
Isoform_27829_14	chr11	-	176	1	Intergenic	novelGene_2045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	96264226	96264050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_96264000_96264200
Isoform_27830_3	chr11	+	181	1	Intergenic	novelGene_2046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAATCAAAACCAA	462	False	NA	NA	False	NA	NA	NA	96279855	96280036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_96279900_96280000
Isoform_27833_10	chr11	+	178	1	Intergenic	novelGene_2047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	2162	False	NA	NA	False	NA	NA	NA	96605939	96606117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_96605900_96606100
Isoform_27887_24	chr11	-	160	1	Intergenic	novelGene_2048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	96723127	96722967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_96723000_96723100
Isoform_27890_40	chr11	-	173	1	Intergenic	novelGene_2049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATAATGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	96749861	96749688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_96749700_96749900
Isoform_27892_8	chr11	+	180	1	Intergenic	novelGene_2050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTAGCATCATATA	7746	False	NA	NA	False	NA	NA	NA	96785598	96785778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_96785600_96785800
Isoform_27897_28	chr11	-	2470	2	Genic_Genomic	ENSMUSG00000018678.14	novel	3055	7	NA	NA	45	-20936	multi-exon	FALSE	non_canonical	1	5	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATCCATTCCAGCAGGT	NA	False	NA	NA	False	NA	NA	NA	96868492	96865980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_96866948_96866989
Isoform_27902_7	chr11	+	379	1	Genic_Genomic	ENSMUSG00000038534.20	novel	NA	NA	NA	NA	-262	565	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAGTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96943987	96944366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_96944000_96944400
Isoform_27903_3	chr11	-	383	1	Intergenic	novelGene_2051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAGAACAAAAAAAAAAA	6704	False	NA	NA	False	NA	NA	NA	96962007	96961624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_96961600_96962000
Isoform_27906_6	chr11	+	175	1	Intergenic	novelGene_2052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	97002703	97002878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97002700_97002900
Isoform_27907_37	chr11	+	174	1	Intergenic	novelGene_2053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGACTGGTGATTT	NA	False	NA	NA	False	NA	NA	NA	97007435	97007609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97007400_97007600
Isoform_27908_6	chr11	+	173	1	Intergenic	novelGene_2054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGAGAACTGTTGTT	3775	False	NA	NA	False	NA	NA	NA	97017343	97017516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97017300_97017500
Isoform_27934_4	chr11	+	1090	1	Intergenic	novelGene_2055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTGTTTGGCTGTGA	NA	False	NA	NA	False	AAGAAA	-26	NA	97079072	97080162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97079100_97080200
Isoform_27936_12	chr11	+	178	1	Intergenic	novelGene_2056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	97081450	97081628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97081400_97081600
Isoform_27939_85	chr11	-	226	1	Intergenic	novelGene_2057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAACTTTTAAAAGATGA	NA	False	NA	NA	False	NA	NA	NA	97094917	97094691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97094700_97094900
Isoform_27945_24	chr11	-	218	1	Intergenic	novelGene_2058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGCAAGGATCTGGG	8358	False	NA	NA	False	AATAAA	-22	NA	97106971	97106753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97106800_97107000
Isoform_27947_41	chr5	+	172	1	FSM	ENSMUSG00000061882.13	ENSMUST00000197673.2	4470	1	649	3649	649	-3649	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124101339	124101511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_+_124101300_124101500
Isoform_27951_4	chr11	+	214	1	FSM	ENSMUSG00000081325.2	ENSMUST00000120534.2	792	1	-97	675	-97	-675	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	AAGAAA	-37	NA	11386886	11387100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_11386900_11387100
Isoform_27952_101	chr11	-	176	1	Intergenic	novelGene_2061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	97189693	97189517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97189500_97189700
Isoform_27953_25	chr11	+	171	1	Intergenic	novelGene_2062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTCCCTAT	NA	False	NA	NA	False	NA	NA	NA	97199314	97199485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97199300_97199500
Isoform_27954_7	chr11	-	223	1	Intergenic	novelGene_2063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTCCCAGCATCCACATG	1610	False	NA	NA	False	NA	NA	NA	97205399	97205176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97205200_97205400
Isoform_27955_78	chr13	+	168	1	Intergenic	novelGene_3148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTACTTTATCAA	NA	False	NA	NA	False	NA	NA	NA	64451928	64452096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_64451900_64452100
Isoform_27956_6	chr11	+	1544	1	NIC	ENSMUSG00000020191.12	novel	330	3	NA	NA	4	-24896	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCAACCCGAAAAGTTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	11412097	11413641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_11412100_11413600
Isoform_27958_29	chr11	-	174	1	Intergenic	novelGene_2065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97213768	97213594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97213600_97213800
Isoform_27959_4	chr11	-	3153	1	ISM	ENSMUSG00000070337.5	ENSMUST00000093942.5	9219	11	15176	1579	15176	-1579	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	97227666	97224513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_97224500_97227700
Isoform_27961_4	chr11	+	397	1	Intergenic	novelGene_2066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCACCAAACTAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	97232688	97233085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97232700_97233100
Isoform_27962_9	chr11	-	165	1	Intergenic	novelGene_2067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTTTAAATAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	97249870	97249705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97249700_97249900
Isoform_27964_5	chr11	+	199	1	Intergenic	novelGene_2068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACTTAATTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	97271972	97272171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97272000_97272200
Isoform_27966_5	chr11	+	2489	1	ISM	ENSMUSG00000038485.7	ENSMUST00000238729.2	7131	10	33614	5	18612	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTGTTACTTGGCTT	7126	False	NA	3	True	AATAAA	-11	NA	97286874	97289363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_97286900_97289400
Isoform_27967_21	chr11	-	176	1	Intergenic	novelGene_2069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9375	False	NA	NA	False	NA	NA	NA	97300951	97300775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97300800_97301000
Isoform_27968_77	chr11	+	177	1	Intergenic	novelGene_1357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	309	False	NA	NA	False	NA	NA	NA	11744437	11744614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_11744400_11744600
Isoform_27970_5	chr11	-	198	1	Intergenic	novelGene_2070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATAAAAATGCTTATGG	NA	False	NA	NA	False	NA	NA	NA	97385018	97384820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97384800_97385000
Isoform_27973_14	chr11	+	156	1	Intergenic	novelGene_2071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAGGGAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	97484298	97484454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97484300_97484500
Isoform_27977_3316	chr11	-	2309	1	FSM	ENSMUSG00000043439.6	ENSMUST00000052281.6	2314	1	2	3	2	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3316	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTCTTTCGAGGTCCT	4943	False	NA	-16	True	AATAAA	-18	NA	97520526	97518217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97518200_97520500
Isoform_27978_3288	chr11	-	2347	1	FSM	ENSMUSG00000043439.6	ENSMUST00000052281.6	2314	1	-36	3	-36	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3288	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTCTTTCGAGGTCCT	4905	False	NA	-16	True	AATAAA	-18	NA	97520564	97518217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_97518200_97520600
Isoform_28_6889	ERCC-00004	+	506	1	FSM	ERCC-00004A	DQ516752	507	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6889	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	1	507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00004_+_0_500
Isoform_28001_11	chr11	-	176	1	Intergenic	novelGene_2073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATGCTGGGAAG	9719	False	NA	NA	False	NA	NA	NA	97523442	97523266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97523300_97523400
Isoform_28002_14	chr11	-	334	1	Intergenic	novelGene_2074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	9010	False	NA	NA	False	NA	NA	NA	97524151	97523817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97523800_97524200
Isoform_28004_53	chr11	-	172	1	Intergenic	novelGene_2075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATGGATTTTGATCC	7745	False	NA	NA	False	NA	NA	NA	97525416	97525244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97525200_97525400
Isoform_28019_8	chr11	+	4800	1	Antisense	novelGene_ENSMUSG00000035455.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAATGAAATCCTG	6492	False	NA	NA	False	NA	NA	NA	11750620	11755420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_11750600_11755400
Isoform_28020_9	chr11	+	178	1	Intergenic	novelGene_2076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97537590	97537768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97537600_97537800
Isoform_28022_11	chr11	-	176	1	Intergenic	novelGene_2077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGC	8211	False	NA	NA	False	NA	NA	NA	97539002	97538826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97538800_97539000
Isoform_28025_14	chr11	+	1682	1	ISM	ENSMUSG00000038437.12	ENSMUST00000044730.12	7274	20	20349	19	7711	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAATCCAAAGAG	262	False	NA	-4	True	AATAAA	-15	NA	97574588	97576270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_97574600_97576300
Isoform_28033_9	chr11	+	2658	1	NIC	ENSMUSG00000078695.9	novel	546	4	NA	NA	9	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAACTGTTTCTGTGGTC	2461	False	NA	-3	True	AATAAA	-19	NA	97576787	97579445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_97576800_97579400
Isoform_28034_4	chr11	-	2996	1	NIC	ENSMUSG00000018537.17	novel	1755	13	NA	NA	-37	509	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	97590511	97587515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97587500_97590500
Isoform_28043_69	chr7	-	156	1	Intergenic	novelGene_10072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAATAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	47810528	47810372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_47810400_47810500
Isoform_28044_9	chr11	-	2666	1	Genic_Genomic	ENSMUSG00000018547.9	novel	NA	NA	NA	NA	-24	-21667	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97635554	97632888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_97632900_97635600
Isoform_28046_14	chr11	+	166	1	Intergenic	novelGene_2078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTTTCAAGACAGGG	NA	False	NA	NA	False	NA	NA	NA	97649171	97649337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97649200_97649300
Isoform_28047_3	chr11	-	198	1	Intergenic	novelGene_2079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTCTGTCTGTC	3147	False	NA	NA	False	NA	NA	NA	97661670	97661472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97661500_97661700
Isoform_28050_12	chr11	+	328	1	Intergenic	novelGene_2080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	97681829	97682157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97681800_97682200
Isoform_28052_12	chr16	+	176	1	Intergenic	novelGene_4439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29543373	29543549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_29543400_29543500
Isoform_2806_149	chr10	-	4199	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	4	860	4	-22	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCTAAAACATTTAC	5939	False	NA	-18	True	AATAAA	-17	NA	77002378	76888871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_2807_196	chr10	-	5026	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	35	2	35	-2	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGGTTTATAAGCTGC	5970	False	NA	-2	True	AATAAA	-18	NA	77002347	76888013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_28078_10	chr11	-	213	1	Intergenic	novelGene_2082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTTAAAAGATACTTCCT	NA	False	NA	NA	False	NA	NA	NA	97756428	97756215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97756200_97756400
Isoform_2808_250	chr10	-	4172	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	31	860	31	-22	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCTAAAACATTTAC	5966	False	NA	-18	True	AATAAA	-17	NA	77002351	76888871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_28080_3	chr11	-	164	1	Intergenic	novelGene_2083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATACATTTATCATGT	9054	False	NA	NA	False	NA	NA	NA	97757487	97757323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97757300_97757500
Isoform_28081_3	chr11	-	165	1	Intergenic	novelGene_2084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATTAAAAAAAAAAGA	9886	False	NA	NA	False	NA	NA	NA	97766167	97766002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97766000_97766200
Isoform_28082_19	chr11	+	174	1	Intergenic	novelGene_2085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTTTTTAAAAATTAG	3352	False	NA	NA	False	NA	NA	NA	97771398	97771572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97771400_97771600
Isoform_28083_63	chr11	-	172	1	Intergenic	novelGene_2086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	9898	False	NA	NA	False	NA	NA	NA	97771818	97771646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97771600_97771800
Isoform_28084_3	chr11	-	392	1	Intergenic	novelGene_2087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	9830	False	NA	NA	False	NA	NA	NA	97772038	97771646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97771600_97772000
Isoform_28085_3	chr11	-	218	1	Intergenic	novelGene_2088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	9830	False	NA	NA	False	NA	NA	NA	97772038	97771820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97771800_97772000
Isoform_28086_4	chr11	+	2446	1	Genic_Genomic	ENSMUSG00000086917.2	novel	NA	NA	NA	NA	-4	-6776	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGTTTACTGCAATC	27	False	NA	NA	False	NA	NA	NA	97775415	97777861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_97775400_97777900
Isoform_28089_63	chr11	+	162	1	Intergenic	novelGene_2089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATACTAGAAAGGG	2349	False	NA	NA	False	NA	NA	NA	97843669	97843831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97843700_97843800
Isoform_2809_120	chr10	-	5057	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	4	2	4	-2	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGGTTTATAAGCTGC	5939	False	NA	-2	True	AATAAA	-18	NA	77002378	76888013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_28092_1019	chr11	+	177	1	Antisense	novelGene_ENSMUSG00000038352.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1019	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGTCTTACCAGA	216	False	NA	10	True	NA	NA	NA	97884803	97884980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_97884800_97885000
Isoform_28097_5	chr11	+	172	1	Intergenic	novelGene_2090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3885	False	NA	NA	False	NA	NA	NA	97925330	97925502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97925300_97925500
Isoform_28098_10	chr11	-	1316	1	NIC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	86	-11963	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGGCGGAGCCCAGACT	5445	False	NA	NA	False	AATAAA	-15	NA	97944202	97942886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_97942900_97944200
Isoform_28099_5	chr11	-	881	1	Intergenic	novelGene_2091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAGATGTCTCAGTGGT	6801	False	NA	NA	False	NA	NA	NA	97948488	97947607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_97947600_97948500
Isoform_28104_39	chr11	+	5659	1	Intergenic	novelGene_2093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97958417	97964076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97958400_97964100
Isoform_28106_126	chr11	+	5431	1	Intergenic	novelGene_2092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGACCGTGTTGCGTTTT	NA	False	NA	NA	False	NA	NA	NA	97958417	97963848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97958400_97963800
Isoform_28110_3	chr11	+	3104	1	Antisense	novelGene_ENSMUSG00000020883.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97989238	97992342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_97989200_97992300
Isoform_28114_12	chr11	-	150	1	Intergenic	novelGene_2094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATTTAAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	98053590	98053440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_98053400_98053600
Isoform_28120_7	chr11	-	200	1	Intergenic	novelGene_2218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAGAAAAGC	6067	False	NA	NA	False	NA	NA	NA	106914641	106914441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106914400_106914600
Isoform_28121_39	chr11	+	184	1	Intergenic	novelGene_2095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATTGGAAATCATTTTT	NA	False	NA	NA	False	NA	NA	NA	98097329	98097513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_98097300_98097500
Isoform_28122_32	chr11	-	212	1	Intergenic	novelGene_2096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAAGTAGGGA	607	False	NA	NA	False	NA	NA	NA	98100906	98100694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_98100700_98100900
Isoform_28126_5	chr11	-	2096	1	Genic_Genomic	ENSMUSG00000085944.2	novel	NA	NA	NA	NA	-6	-5476	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	98249115	98247019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_98247000_98249100
Isoform_28127_126	chr11	+	164	1	Intergenic	novelGene_2097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGGTGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	98286417	98286581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_98286400_98286600
Isoform_2813_141	chr10	-	4168	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	31	-23	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_6	49.9834594889811	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	5966	False	NA	-19	True	AATAAA	-16	NA	77002351	76888872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_28130_4	chr11	-	163	1	Intergenic	novelGene_2098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGTAAATAAATAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	98334674	98334511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_98334500_98334700
Isoform_28131_9	chr11	-	180	1	Intergenic	novelGene_2099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAATTCTCAGCTC	2572	False	NA	NA	False	NA	NA	NA	98382232	98382052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_98382100_98382200
Isoform_28132_7	chr11	+	174	1	Intergenic	novelGene_2100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCAAATAAATTT	NA	False	NA	NA	False	NA	NA	NA	98439507	98439681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_98439500_98439700
Isoform_28133_5	chr11	+	193	1	Intergenic	novelGene_2101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGTTAAACTAG	NA	False	NA	NA	False	NA	NA	NA	98529155	98529348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_98529200_98529300
Isoform_28139_24	chr11	+	171	1	Intergenic	novelGene_2102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATATTTAAAA	2127	False	NA	NA	False	NA	NA	NA	98648890	98649061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_98648900_98649100
Isoform_2814_107	chr10	-	5021	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_6	49.9834594889811	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGGTTTATAAGCTGC	5972	False	NA	-2	True	AATAAA	-18	NA	77002345	76888013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_28147_7	chr11	-	173	1	Intergenic	novelGene_2103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	98753108	98752935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_98752900_98753100
Isoform_28148_41	chr11	-	160	1	Intergenic	novelGene_2104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4514	False	NA	NA	False	NA	NA	NA	98770862	98770702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_98770700_98770900
Isoform_2815_16	chr10	-	4131	41	NIC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	37	-24	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	64.1984764227314	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTCTAAAACATTT	5972	False	NA	-20	True	AATAAA	-15	NA	77002345	76888873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_28150_21	chr11	-	176	1	Intergenic	novelGene_2105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	98837701	98837525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_98837500_98837700
Isoform_28153_5	chr11	+	159	1	Intergenic	novelGene_2106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCATCTTTTGGGGCTG	NA	False	NA	NA	False	AAAACA	-8	NA	98878856	98879015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_98878900_98879000
Isoform_28157_12	chr11	+	177	1	Intergenic	novelGene_2107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCTATGAACA	6188	False	NA	NA	False	NA	NA	NA	98897380	98897557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_98897400_98897600
Isoform_28159_11	chr11	+	310	1	Intergenic	novelGene_2108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAATTAAAAA	7720	False	NA	NA	False	NA	NA	NA	98898912	98899222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_98898900_98899200
Isoform_28161_86	chr11	-	176	1	Intergenic	novelGene_2109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAGGATTTG	NA	False	NA	NA	False	NA	NA	NA	98924844	98924668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_98924700_98924800
Isoform_28162_69	chr11	-	171	1	Antisense	novelGene_ENSMUSG00000017493.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATTAAAAAAACAAC	NA	False	NA	0	True	NA	NA	NA	98945089	98944918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_98944900_98945100
Isoform_28163_4	chr11	-	191	1	Intergenic	novelGene_2110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTAAGGAAACAGAGGCC	4550	False	NA	NA	False	NA	NA	NA	98999011	98998820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_98998800_98999000
Isoform_28165_39	chr11	+	170	1	Intergenic	novelGene_2111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAGTCTAGCTAAAT	NA	False	NA	5	True	NA	NA	NA	99002685	99002855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_99002700_99002900
Isoform_28168_11	chr11	+	158	1	Intergenic	novelGene_2112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAATAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99102115	99102273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_99102100_99102300
Isoform_28169_7	chr11	+	178	1	Intergenic	novelGene_2113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATAATTATACTGG	NA	False	NA	NA	False	NA	NA	NA	99135416	99135594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_99135400_99135600
Isoform_28170_22	chr11	-	177	1	Intergenic	novelGene_2114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAGATAGA	2908	False	NA	NA	False	NA	NA	NA	99142178	99142001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_99142000_99142200
Isoform_28171_3	chr11	+	934	1	Antisense	novelGene_ENSMUSG00000019761.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATAGG	NA	False	NA	NA	False	NA	NA	NA	99277026	99277960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_99277000_99278000
Isoform_28172_10	chr11	+	266	1	Intergenic	novelGene_2115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTAATTAGATGTAGC	NA	False	NA	NA	False	AATGAA	-11	NA	99760943	99761209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_99760900_99761200
Isoform_28175_3	chr11	-	180	1	Intergenic	novelGene_2116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAAAAGTCTTTACTTG	2555	False	NA	NA	False	NA	NA	NA	100190699	100190519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_100190500_100190700
Isoform_28176_66	chr11	-	167	1	Intergenic	novelGene_2117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCCACCAAACCC	9638	False	NA	NA	False	NA	NA	NA	100194653	100194486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_100194500_100194700
Isoform_28177_29	chr11	-	176	1	Intergenic	novelGene_2118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAATTGTTACGGG	8660	False	NA	NA	False	NA	NA	NA	100195631	100195455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_100195500_100195600
Isoform_2820_17	chr10	-	2913	11	FSM	ENSMUSG00000020262.16	ENSMUST00000020496.14	6549	11	-8	3644	-3	-3642	multi-exon	FALSE	canonical	2	18	junction_4	10.2024506859872	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGGAATGAGATTTATAA	NA	False	NA	NA	False	AATAAA	-14	NA	77254107	77130203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
Isoform_28205_35	chr11	+	184	1	Intergenic	novelGene_2119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGCCTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	100282464	100282648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_100282500_100282600
Isoform_28207_6	chr11	-	228	1	Intergenic	novelGene_2120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAAAACCAGGTCCTCT	NA	False	NA	NA	False	NA	NA	NA	100309243	100309015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_100309000_100309200
Isoform_28208_7	chr11	+	5277	1	Genic_Genomic	ENSMUSG00000001558.6	novel	NA	NA	NA	NA	14493	4674	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTAGGGAATGCAATAA	NA	False	NA	NA	False	NA	NA	NA	100347245	100352522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_100347200_100352500
Isoform_2821_17	chr10	-	6518	12	NNC	ENSMUSG00000020262.16	novel	6583	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.830104062241	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATGGACATTTTCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	77254104	77126560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_77127050_77127084_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
Isoform_28220_22	chr11	+	2926	1	Intergenic	novelGene_2121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGGGTTGGAGAGATAGC	NA	False	NA	NA	False	AATAAA	-10	NA	100499333	100502259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_100499300_100502300
Isoform_28225_31	chr11	+	178	1	Intergenic	novelGene_1358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	12373885	12374063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_12373900_12374100
Isoform_28226_739	chr11	+	174	1	Intergenic	novelGene_2122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	739	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100704051	100704225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_100704100_100704200
Isoform_28232_4	chr11	+	8496	1	Intergenic	novelGene_2123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	100809688	100818184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_100809700_100818200
Isoform_28233_3	chr11	+	2065	1	Antisense	novelGene_ENSMUSG00000004044.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACACACCAATTGGTTTT	56	False	NA	NA	False	AATAAA	-12	NA	100860706	100862771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_100860700_100862800
Isoform_28236_4	chr11	+	2536	1	Intergenic	novelGene_2125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100998291	101000827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_100998300_101000800
Isoform_28237_4	chrX	+	178	1	Intergenic	novelGene_12184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATGCTTATA	NA	False	NA	NA	False	NA	NA	NA	132500989	132501167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_132501000_132501200
Isoform_28239_15	chr11	+	176	1	Intergenic	novelGene_2127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2770	False	NA	NA	False	NA	NA	NA	101047851	101048027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101047900_101048000
Isoform_2824_31	chr10	-	2446	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-54	2	-54	-2	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTCCCCTGGCTT	NA	False	NA	-9	True	AATAAA	-24	NA	77351673	77322496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
Isoform_28240_30	chr11	-	187	1	Intergenic	novelGene_1294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAACAG	732	False	NA	NA	False	NA	NA	NA	3355451	3355264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_3355300_3355500
Isoform_28242_9	chr11	-	1326	1	Antisense	novelGene_ENSMUSG00000078656.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101149218	101147892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_101147900_101149200
Isoform_2825_361	chr10	-	2392	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	0	2	0	-2	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTCCCCTGGCTT	NA	False	NA	-9	True	AATAAA	-24	NA	77351619	77322496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
Isoform_28253_3	chr11	+	200	1	ISM	ENSMUSG00000078651.9	ENSMUST00000041095.14	2543	4	4426	14	4402	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAATGGAAT	NA	False	NA	NA	False	NA	NA	NA	101220314	101220514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_101220300_101220500
Isoform_28254_43	chr11	+	168	1	Intergenic	novelGene_2128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAAAATAATGATTGA	NA	False	NA	NA	False	NA	NA	NA	101225795	101225963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101225800_101226000
Isoform_28256_21	chr11	-	204	1	Intergenic	novelGene_2129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTCTCCCTACTGCACA	NA	False	NA	NA	False	NA	NA	NA	101247611	101247407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_101247400_101247600
Isoform_28257_16	chr11	-	179	1	Intergenic	novelGene_2130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTTCAAAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	101279510	101279331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_101279300_101279500
Isoform_28259_6	chr11	+	209	1	Intergenic	novelGene_2131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	6006	False	NA	NA	False	NA	NA	NA	101329054	101329263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101329100_101329300
Isoform_28262_6	chr11	-	179	1	Intergenic	novelGene_2132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101344360	101344181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_101344200_101344400
Isoform_28269_123	chr11	-	162	1	Intergenic	novelGene_2133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATGAATA	NA	False	NA	NA	False	NA	NA	NA	101360696	101360534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_101360500_101360700
Isoform_28270_11	chr11	+	181	1	Intergenic	novelGene_2134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATGATA	2092	False	NA	NA	False	NA	NA	NA	101372810	101372991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101372800_101373000
Isoform_28275_12	chr11	+	194	1	Intergenic	novelGene_2135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAGAACTAATTTCA	NA	False	NA	NA	False	NA	NA	NA	101438091	101438285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101438100_101438300
Isoform_28278_8	chr11	-	1923	1	Antisense	novelGene_ENSMUSG00000034947.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGTGGCTAAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	101475663	101473740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_101473700_101475700
Isoform_28279_4	chr11	-	2220	1	Antisense	novelGene_ENSMUSG00000034947.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGTGGCTAAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	101475960	101473740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_101473700_101476000
Isoform_28281_17	chr11	+	209	1	Intergenic	novelGene_2136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTTTAAAATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	101496427	101496636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101496400_101496600
Isoform_28282_39	chr11	+	154	1	Intergenic	novelGene_2137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	101511887	101512041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101511900_101512000
Isoform_28283_16	chr11	+	440	1	FSM	ENSMUSG00000119776.1	ENSMUST00000240535.1	191	1	0	-249	0	249	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-13	NA	101518191	101518631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_101518200_101518600
Isoform_28284_6	chr11	+	171	1	Intergenic	novelGene_2138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	101527653	101527824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101527700_101527800
Isoform_28286_3	chr11	+	172	1	Intergenic	novelGene_2139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAATTTTATATATT	NA	False	NA	NA	False	NA	NA	NA	101535178	101535350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101535200_101535400
Isoform_28289_3	chr11	-	157	1	Intergenic	novelGene_2140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAACAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101567260	101567103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_101567100_101567300
Isoform_28290_60	chr11	+	177	1	Intergenic	novelGene_2141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	101573124	101573301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101573100_101573300
Isoform_28292_8	chr11	-	328	1	Intergenic	novelGene_2142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5298	False	NA	NA	False	NA	NA	NA	101593967	101593639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_101593600_101594000
Isoform_28293_4	chr11	+	170	1	Intergenic	novelGene_2143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	101601446	101601616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_101601400_101601600
Isoform_28297_3	chr11	-	179	1	Intergenic	novelGene_2144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	101646015	101645836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_101645800_101646000
Isoform_28298_3	chr11	-	187	1	Intergenic	novelGene_2145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAGTGACTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	101814146	101813959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_101814000_101814100
Isoform_28299_5	chr11	+	179	1	Intergenic	novelGene_2146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAACATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	102010480	102010659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102010500_102010700
Isoform_28300_3	chr11	+	605	1	FSM	ENSMUSG00000082045.5	ENSMUST00000120901.2	569	1	-19	-17	-19	17	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	102014878	102015483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102014900_102015500
Isoform_28304_23	chr11	-	181	1	Intergenic	novelGene_2147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAACTGAAAGAAA	2525	False	NA	NA	False	NA	NA	NA	102049170	102048989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_102049000_102049200
Isoform_28308_7	chr11	+	184	1	Antisense	novelGene_ENSMUSG00000020922.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAGAAAAAA	4016	False	NA	NA	False	AATAAA	-25	NA	102054197	102054381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_102054200_102054400
Isoform_28309_6	chr11	+	158	1	Intergenic	novelGene_2148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACTATCAAATCAAGCC	NA	False	NA	NA	False	NA	NA	NA	102078215	102078373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102078200_102078400
Isoform_28310_7	chr11	-	167	1	Intergenic	novelGene_2149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAAATAAAATAAACG	NA	False	NA	NA	False	NA	NA	NA	102122864	102122697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_102122700_102122900
Isoform_28312_3	chr11	-	3067	1	Antisense	novelGene_ENSMUSG00000034773.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7052	False	NA	NA	False	NA	NA	NA	102156986	102153919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_102153900_102157000
Isoform_28315_586	chr11	-	172	1	Intergenic	novelGene_2150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	586	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	6288	False	NA	NA	False	NA	NA	NA	102171431	102171259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_102171300_102171400
Isoform_28316_6	chr11	+	178	1	Intergenic	novelGene_2151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATATATAGTTTAGGA	NA	False	NA	NA	False	NA	NA	NA	102173904	102174082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102173900_102174100
Isoform_28317_10	chr11	+	4300	1	NIC	ENSMUSG00000034757.16	novel	1939	4	NA	NA	-3	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175761	102180061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_102175800_102180100
Isoform_28333_14	chr11	+	182	1	Intergenic	novelGene_1359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGAAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	14067171	14067353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_14067200_14067400
Isoform_28334_5	chr11	-	981	1	Genic_Genomic	ENSMUSG00000020923.18	novel	NA	NA	NA	NA	-505	-5658	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGCAAAAA	7856	False	NA	NA	False	AAAAAG	-31	NA	102211073	102210092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_102210100_102211100
Isoform_28336_13	chr11	-	180	1	Intergenic	novelGene_2152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8518	False	NA	NA	False	NA	NA	NA	102216279	102216099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_102216100_102216300
Isoform_28338_373	chr11	-	176	1	Intergenic	novelGene_2153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	7864	False	NA	NA	False	NA	NA	NA	102222282	102222106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_102222100_102222300
Isoform_28340_6	chr11	+	229	1	Intergenic	novelGene_2154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCTTATGCTAATCCCA	NA	False	NA	NA	False	NA	NA	NA	102230864	102231093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102230900_102231100
Isoform_28345_68	chr11	+	174	1	Intergenic	novelGene_2156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	102307136	102307310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102307100_102307300
Isoform_28352_3	chr11	+	3693	1	FSM	ENSMUSG00000050288.7	ENSMUST00000057893.7	3663	1	-33	3	-33	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATCTAGCTCTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	102495188	102498881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_102495200_102498900
Isoform_28357_7	chr11	+	159	1	Intergenic	novelGene_2158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATTAAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	102532676	102532835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102532700_102532800
Isoform_28358_10	chr11	-	182	1	Intergenic	novelGene_1360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAACTGAAACAA	NA	False	NA	NA	False	NA	NA	NA	15615308	15615126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_15615100_15615300
Isoform_28359_12	chr11	+	177	1	Intergenic	novelGene_2159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGTACACA	NA	False	NA	NA	False	NA	NA	NA	102543755	102543932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102543800_102543900
Isoform_28373_8	chr11	-	2667	1	Genic_Genomic	ENSMUSG00000045532.6	novel	NA	NA	NA	NA	-61	-4819	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAACCAAGAATAACAAT	8598	False	NA	NA	False	NA	NA	NA	102837575	102834908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_102834900_102837600
Isoform_28384_15	chr11	+	2146	1	FSM	ENSMUSG00000048878.7	ENSMUST00000053063.7	3495	1	0	1349	0	-1349	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTCAGTGTGATTTCT	NA	False	NA	9	True	AATAAA	-20	NA	103007056	103009202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103007100_103009200
Isoform_28389_7	chr11	+	186	1	Intergenic	novelGene_2161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTGGGA	NA	False	NA	NA	False	NA	NA	NA	103011818	103012004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_103011800_103012000
Isoform_28390_8	chr11	-	2487	1	Antisense	novelGene_ENSMUSG00000043372.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTTTTTTTTCTT	4665	False	NA	NA	False	ATTAAA	-13	NA	103023689	103021202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_103021200_103023700
Isoform_28393_6	chr11	+	1758	1	Genic_Genomic	ENSMUSG00000043372.13	novel	NA	NA	NA	NA	4318	64	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATAAAGTGTGCCCTCT	451	False	NA	54	True	AATAAA	-37	NA	103029008	103030766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_103029000_103030800
Isoform_28396_4	chr11	+	674	1	Genic_Genomic	ENSMUSG00000085360.2	novel	NA	NA	NA	NA	4724	6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAAGATTCCATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	103251250	103251924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_103251200_103251900
Isoform_28397_21	chr11	+	1334	1	Intergenic	novelGene_2162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	103280239	103281573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_103280200_103281600
Isoform_28398_16	chr11	+	169	1	Intergenic	novelGene_2163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAC	NA	False	NA	NA	False	NA	NA	NA	103297126	103297295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_103297100_103297300
Isoform_28399_29	chr11	-	175	1	Intergenic	novelGene_2164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	103304868	103304693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_103304700_103304900
Isoform_28400_3	chr11	+	1077	1	FSM	ENSMUSG00000046215.4	ENSMUST00000057870.4	1010	1	-67	0	-67	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	103540328	103541405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_103540300_103541400
Isoform_28405_4	chr11	+	171	1	Intergenic	novelGene_2165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	103587485	103587656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_103587500_103587700
Isoform_28406_9	chr11	+	236	1	Intergenic	novelGene_2166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGATTACAGTCAGTTAA	9164	False	NA	NA	False	NA	NA	NA	103648145	103648381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_103648100_103648400
Isoform_28410_15	chr11	+	176	1	Intergenic	novelGene_2167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103840658	103840834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_103840700_103840800
Isoform_28411_325	chr11	+	178	1	Intergenic	novelGene_2168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	103846372	103846550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_103846400_103846600
Isoform_28413_107	chr11	-	176	1	Intergenic	novelGene_2169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATGGTTACCAA	NA	False	NA	NA	False	NA	NA	NA	103856872	103856696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_103856700_103856900
Isoform_28414_18	chr11	+	175	1	Intergenic	novelGene_1361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16699757	16699932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_16699800_16699900
Isoform_28416_9	chr11	-	159	1	Intergenic	novelGene_2170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTAAAAAAATCAGGCA	NA	False	NA	NA	False	NA	NA	NA	103882236	103882077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_103882100_103882200
Isoform_28418_3	chr11	+	276	1	Intergenic	novelGene_1362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATTGCATGTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	16838728	16839004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_16838700_16839000
Isoform_28419_4	chr11	-	3025	1	Antisense	novelGene_ENSMUSG00000018411.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	-7	True	NA	NA	NA	104180073	104177048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_104177000_104180100
Isoform_28421_8	chr11	+	1081	1	Intergenic	novelGene_2171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTCTCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104178131	104179212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_104178100_104179200
Isoform_28423_15	chr11	-	232	1	Intergenic	novelGene_2172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGTGGTGGAGATC	NA	False	NA	NA	False	NA	NA	NA	104203725	104203493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_104203500_104203700
Isoform_28424_9	chr11	+	221	1	Intergenic	novelGene_2173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGGGTGCCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	104214121	104214342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_104214100_104214300
Isoform_28429_36	chr11	-	174	1	Intergenic	novelGene_2174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAAGGCATGGCC	NA	False	NA	NA	False	NA	NA	NA	104279764	104279590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_104279600_104279800
Isoform_28430_23	chr11	+	176	1	Intergenic	novelGene_2175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCAACCCT	5459	False	NA	NA	False	NA	NA	NA	104301924	104302100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_104301900_104302100
Isoform_28432_4	chr11	-	848	1	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	24	-16483	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	8193	False	NA	NA	False	AAAAAG	-30	NA	104333093	104332245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_104332200_104333100
Isoform_28433_10	chr11	-	185	1	Intergenic	novelGene_2176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAACTAAAGAGCCAA	4897	False	NA	NA	False	NA	NA	NA	104372481	104372296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_104372300_104372500
Isoform_28441_4	chr11	-	175	1	Intergenic	novelGene_2177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTATGC	6346	False	NA	NA	False	NA	NA	NA	104410694	104410519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_104410500_104410700
Isoform_28443_169	chr11	-	178	1	Intergenic	novelGene_2178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGCAACATAAAAAATAGCC	6443	False	NA	NA	False	NA	NA	NA	104539481	104539303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_104539300_104539500
Isoform_28444_35	chr11	-	180	1	Intergenic	novelGene_2179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	104582622	104582442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_104582400_104582600
Isoform_28447_71	chr11	+	177	1	Intergenic	novelGene_2180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	104794364	104794541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_104794400_104794500
Isoform_28448_35	chr11	-	175	1	Intergenic	novelGene_2181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATGGAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	104816958	104816783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_104816800_104817000
Isoform_28450_16	chr11	+	1800	1	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	12	-7366	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105017316	105019116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_105017300_105019100
Isoform_28452_5	chr11	-	4164	1	FSM	ENSMUSG00000081965.2	ENSMUST00000118770.2	1845	1	-429	-1890	-429	1890	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGCGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	105057875	105053711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_105053700_105057900
Isoform_28453_12	chr11	-	3574	1	FSM	ENSMUSG00000081965.2	ENSMUST00000118770.2	1845	1	-423	-1306	-423	1306	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTCTTCTCTTCCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	105057869	105054295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_105054300_105057900
Isoform_28459_40	chr11	+	172	1	Intergenic	novelGene_2182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105066119	105066291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_105066100_105066300
Isoform_28461_3	chr11	-	2252	2	Genic_Genomic	ENSMUSG00000099681.2	novel	3708	1	NA	NA	138	-1296	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGCTTTATGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	105072121	105069847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_105071803_105071824
Isoform_28462_5	chr11	-	1426	1	FSM	ENSMUSG00000099681.2	ENSMUST00000190120.2	3708	1	165	2117	165	-2117	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGAATATGGCCTGCA	NA	False	NA	NA	False	AATAAA	-3	NA	105072094	105070668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_105070700_105072100
Isoform_28466_5	chr11	-	175	1	Intergenic	novelGene_2183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAACAAATAT	NA	False	NA	NA	False	NA	NA	NA	105107024	105106849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_105106800_105107000
Isoform_28469_7	chr11	-	176	1	Intergenic	novelGene_2184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8899	False	NA	NA	False	NA	NA	NA	105117421	105117245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_105117200_105117400
Isoform_28471_5	chr11	-	175	1	Intergenic	novelGene_2185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105166369	105166194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_105166200_105166400
Isoform_28473_9	chr11	+	157	1	Intergenic	novelGene_2186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATCTAAAA	NA	False	NA	NA	False	NA	NA	NA	105331305	105331462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_105331300_105331500
Isoform_28474_3	chr11	-	179	1	Intergenic	novelGene_2187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAACTAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	105490391	105490212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_105490200_105490400
Isoform_28475_7	chr11	-	449	1	Intergenic	novelGene_2188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105525127	105524678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_105524700_105525100
Isoform_28477_74	chr11	-	163	1	Intergenic	novelGene_2189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCTTTTTTTAAAATCC	6105	False	NA	NA	False	NA	NA	NA	105938393	105938230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_105938200_105938400
Isoform_2848_2937	chr10	-	2720	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	58	952	-13	-952	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	2937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGGACAACATGACCAG	NA	False	NA	-23	True	AATAAA	-22	NA	77845583	77823732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
Isoform_28493_4	chr11	-	176	1	Intergenic	novelGene_2190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATTAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	105996642	105996466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_105996500_105996600
Isoform_28494_13	chr11	-	208	1	Intergenic	novelGene_2191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAATGAATATGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	106007148	106006940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106006900_106007100
Isoform_28496_29	chr11	+	227	1	Intergenic	novelGene_2192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	106031917	106032144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106031900_106032100
Isoform_28500_31	chr11	+	173	1	Intergenic	novelGene_1363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAATCTCTCCA	NA	False	NA	NA	False	NA	NA	NA	17188805	17188978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_17188800_17189000
Isoform_2851_159	chr10	-	2783	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	59	888	-12	-888	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGCTATAGTTTGTTT	NA	False	NA	-4	True	NA	NA	NA	77845582	77823668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
Isoform_28510_3	chr11	+	176	1	Intergenic	novelGene_2193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATCT	1459	False	NA	NA	False	NA	NA	NA	106161765	106161941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106161800_106161900
Isoform_28512_3	chr11	-	184	1	Intergenic	novelGene_2194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAATATATTATATG	NA	False	NA	NA	False	NA	NA	NA	106331927	106331743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106331700_106331900
Isoform_28514_72	chr11	-	175	1	Intergenic	novelGene_2195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	9096	False	NA	NA	False	NA	NA	NA	106336006	106335831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106335800_106336000
Isoform_28516_33	chr11	+	172	1	Intergenic	novelGene_2196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAACTGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106350878	106351050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106350900_106351000
Isoform_28517_19	chr11	-	195	1	Intergenic	novelGene_2197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGACTCCAGGAAGATG	6482	False	NA	NA	False	NA	NA	NA	106381629	106381434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106381400_106381600
Isoform_28518_48	chr11	+	291	1	FSM	ENSMUSG00000065126.3	ENSMUST00000083192.3	70	1	-78	-143	-78	143	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACCCCGCTGGTGTCTT	4511	False	NA	18	True	AATAAA	-8	NA	106391740	106392031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_106391700_106392000
Isoform_28520_7	chr11	+	159	1	Intergenic	novelGene_2198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	106456669	106456828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106456700_106456800
Isoform_28522_32	chr11	+	153	1	Intergenic	novelGene_1295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTGTTAGAAAA	NA	False	NA	NA	False	NA	NA	NA	3387467	3387620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_3387500_3387600
Isoform_28524_2830	chr11	-	179	1	Intergenic	novelGene_2199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2830	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4954	False	NA	NA	False	NA	NA	NA	106525155	106524976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106525000_106525200
Isoform_28525_4	chr11	+	177	1	Intergenic	novelGene_2200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAAGCT	NA	False	NA	7	True	NA	NA	NA	106527815	106527992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106527800_106528000
Isoform_28526_24	chr11	+	160	1	Intergenic	novelGene_2201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAATAGTTCT	1520	False	NA	NA	False	NA	NA	NA	106531897	106532057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106531900_106532100
Isoform_28530_4	chr11	+	179	1	Intergenic	novelGene_2202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAAACC	6372	False	NA	NA	False	NA	NA	NA	106555997	106556176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106556000_106556200
Isoform_28531_12	chr11	+	2498	1	Antisense	novelGene_ENSMUSG00000020717.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106570898	106573396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_106570900_106573400
Isoform_28533_8	chr11	+	155	1	Intergenic	novelGene_2203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGAGCCATCTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	106613139	106613294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106613100_106613300
Isoform_28535_3	chr11	+	179	1	Intergenic	novelGene_2204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGTTGGA	NA	False	NA	NA	False	NA	NA	NA	106639793	106639972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106639800_106640000
Isoform_28536_13	chr11	+	218	1	Intergenic	novelGene_2205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGATGTAAAAATACTCA	NA	False	NA	NA	False	NA	NA	NA	106640622	106640840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106640600_106640800
Isoform_28538_67	chr11	+	178	1	Intergenic	novelGene_1364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17899567	17899745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_17899600_17899700
Isoform_2855_45	chr10	-	2812	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	30	888	30	-888	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGCTATAGTTTGTTT	NA	False	NA	-4	True	NA	NA	NA	77845611	77823668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
Isoform_28560_461	chr11	+	5260	1	Antisense	novelGene_ENSMUSG00000020719.15_AS_novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_106673600_106678900
Isoform_28561_3	chr11	+	1605	1	Genic_Genomic	ENSMUSG00000018372.14	novel	NA	NA	NA	NA	-652	-1064	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATTAGTGTCGGTGTT	4444	False	NA	NA	False	AATAAA	-14	NA	106679425	106681030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_106679400_106681000
Isoform_28562_6	chr11	+	1514	1	Genic_Genomic	ENSMUSG00000018372.14	novel	NA	NA	NA	NA	-555	-1058	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGTCGGTGTTGTCATT	4541	False	NA	NA	False	AATAAA	-20	NA	106679522	106681036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_106679500_106681000
Isoform_28563_678	chr11	+	201	1	Intergenic	novelGene_2206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	678	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCATTTGTTT	8128	False	NA	NA	False	NA	NA	NA	106696799	106697000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106696800_106697000
Isoform_28564_102	chr8	-	175	1	Intergenic	novelGene_10566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26252939	26252764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_26252800_26252900
Isoform_28565_14	chr11	-	169	1	Intergenic	novelGene_2207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATCAGGACCTCCGAA	NA	False	NA	NA	False	NA	NA	NA	106701037	106700868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106700900_106701000
Isoform_28568_3	chr11	-	3605	1	NIC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	0	-11515	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCCCAGCACTTGGGA	NA	False	NA	NA	False	NA	NA	NA	17903875	17900270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_17900300_17903900
Isoform_28569_110	chr11	-	179	1	Intergenic	novelGene_2208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAAGTTAGGA	9030	False	NA	NA	False	NA	NA	NA	106742082	106741903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106741900_106742100
Isoform_28572_7	chr11	-	159	1	Intergenic	novelGene_2209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	106761031	106760872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106760900_106761000
Isoform_28576_19	chr11	+	173	1	Intergenic	novelGene_2210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGCC	NA	False	NA	NA	False	NA	NA	NA	106821993	106822166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106822000_106822200
Isoform_28578_4	chr11	-	179	1	Intergenic	novelGene_2211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTCGGGTCTACAGAG	NA	False	NA	NA	False	NA	NA	NA	106854471	106854292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106854300_106854500
Isoform_28579_68	chr11	+	176	1	Intergenic	novelGene_2212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAACACCCATAAA	NA	False	NA	NA	False	NA	NA	NA	106854701	106854877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106854700_106854900
Isoform_28580_4	chr11	+	219	1	Intergenic	novelGene_2213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCACGTCTCTCCCAGA	NA	False	NA	NA	False	NA	NA	NA	106873676	106873895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106873700_106873900
Isoform_28581_44	chr11	+	176	1	Intergenic	novelGene_2214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGTATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106876480	106876656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106876500_106876700
Isoform_28582_11	chr11	-	202	1	Intergenic	novelGene_1365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTAAAAGCACTGCCATG	9844	False	NA	NA	False	NA	NA	NA	17944035	17943833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_17943800_17944000
Isoform_28583_73	chr11	+	176	1	Intergenic	novelGene_2215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	106884577	106884753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106884600_106884800
Isoform_28589_507	chr11	-	177	1	Intergenic	novelGene_2216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6822	False	NA	NA	False	NA	NA	NA	106906807	106906630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106906600_106906800
Isoform_28591_13	chr11	+	327	1	Intergenic	novelGene_2217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAAAAAAGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	106910778	106911105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106910800_106911100
Isoform_28593_243	chr11	-	197	1	Intergenic	novelGene_2220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAAATAAGCGCTGAT	NA	False	NA	NA	False	NA	NA	NA	106955367	106955170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106955200_106955400
Isoform_28594_140	chr11	+	178	1	Intergenic	novelGene_2221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	106988434	106988612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_106988400_106988600
Isoform_28595_70	chr11	-	178	1	Intergenic	novelGene_2222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGTTTAAAAAAA	2561	False	NA	NA	False	NA	NA	NA	106996931	106996753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106996800_106996900
Isoform_28596_21	chr11	-	178	1	Intergenic	novelGene_2223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATATTGATCTCTA	NA	False	NA	NA	False	NA	NA	NA	107000206	107000028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_1.07e+08_107000200
Isoform_28597_66	chr11	-	172	1	Intergenic	novelGene_2224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAATGAAAGAAAG	8540	False	NA	NA	False	NA	NA	NA	107007138	107006966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107007000_107007100
Isoform_28598_56	chr11	+	175	1	Intergenic	novelGene_2225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAACACAAATAAAT	2183	False	NA	NA	False	NA	NA	NA	107024922	107025097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107024900_107025100
Isoform_28599_105	chr11	+	178	1	Intergenic	novelGene_2226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2580	False	NA	NA	False	NA	NA	NA	107025319	107025497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107025300_107025500
Isoform_28600_4	chr11	-	243	1	Intergenic	novelGene_2227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAACATCTCTCTCTGT	NA	False	NA	NA	False	ACTAAA	-15	NA	107026326	107026083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107026100_107026300
Isoform_28605_3	chr11	+	514	1	Intergenic	novelGene_2228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAAAC	6576	False	NA	NA	False	NA	NA	NA	107032637	107033151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107032600_107033200
Isoform_28606_10	chr11	+	181	1	Intergenic	novelGene_2229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAAGAAAGAACGAA	8588	False	NA	NA	False	NA	NA	NA	107034649	107034830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107034600_107034800
Isoform_28608_6	chr11	+	171	1	Intergenic	novelGene_2230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAATAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	107043174	107043345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107043200_107043300
Isoform_28609_19	chr11	-	168	1	Intergenic	novelGene_2231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTATTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	107044122	107043954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107044000_107044100
Isoform_28610_31	chr11	+	174	1	Intergenic	novelGene_2232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACACTTG	NA	False	NA	NA	False	NA	NA	NA	107046789	107046963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107046800_107047000
Isoform_28611_4	chr11	+	159	1	Intergenic	novelGene_2233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTTTAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	107053110	107053269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107053100_107053300
Isoform_28612_88	chr12	-	177	1	Intergenic	novelGene_2739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGAGT	NA	False	NA	NA	False	NA	NA	NA	86499237	86499060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_86499100_86499200
Isoform_28613_5	chr11	+	159	1	Intergenic	novelGene_2235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	107078624	107078783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107078600_107078800
Isoform_28615_9	chr11	-	174	1	Intergenic	novelGene_2236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	107098348	107098174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107098200_107098300
Isoform_28617_11	chr11	+	1412	1	Antisense	novelGene_ENSMUSG00000040430.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCATCCATTTACCC	NA	False	NA	NA	False	NA	NA	NA	107101193	107102605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_107101200_107102600
Isoform_28618_3	chr11	+	1911	1	Antisense	novelGene_ENSMUSG00000040430.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	107101193	107103104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_107101200_107103100
Isoform_28619_22	chr11	-	179	1	Intergenic	novelGene_2237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAAACAAA	8961	False	NA	NA	False	NA	NA	NA	107123691	107123512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107123500_107123700
Isoform_2862_7	chr10	-	2238	6	ISM	ENSMUSG00000000731.16	ENSMUST00000131028.8	2966	14	5319	9	-31	-1	3prime_fragment	FALSE	canonical	2	9	junction_4	3.86781592116274	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGGTACACCTGGTGG	NA	False	NA	-10	True	ATTAAA	-15	NA	77874125	77865865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77871668_77872518_77872619_77873706
Isoform_28623_52	chr11	-	221	1	Intergenic	novelGene_2238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTAGAAAATGCCCAAGC	NA	False	NA	NA	False	NA	NA	NA	107197803	107197582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107197600_107197800
Isoform_28625_116	chr11	-	189	1	Intergenic	novelGene_2239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTACTTACAACTTTT	NA	False	NA	NA	False	NA	NA	NA	107271594	107271405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107271400_107271600
Isoform_28626_8	chr11	-	179	1	Intergenic	novelGene_2240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATATAAATTAGAGCCAA	6352	False	NA	NA	False	NA	NA	NA	107331532	107331353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107331400_107331500
Isoform_28627_19	chr11	+	316	1	Intergenic	novelGene_2241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	107332204	107332520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107332200_107332500
Isoform_28629_13	chr11	-	173	1	Intergenic	novelGene_2242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGATTTTGATTGATT	2838	False	NA	NA	False	NA	NA	NA	107345366	107345193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107345200_107345400
Isoform_2863_8	chr10	-	3095	5	NIC	ENSMUSG00000000731.16	novel	1712	13	NA	NA	-34	2	intron_retention	FALSE	canonical	2	13	junction_4	2.58602010819715	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTACACCTGGTGGATG	NA	False	NA	-7	True	ATTAAA	-18	NA	77874128	77865862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77872619_77873706
Isoform_28630_92	chr11	+	176	1	Intergenic	novelGene_2243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAGTGATTTTCCG	8991	False	NA	NA	False	NA	NA	NA	107347028	107347204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107347000_107347200
Isoform_28631_12	chr11	+	248	1	Intergenic	novelGene_2244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATCATAGAAGGCCTG	3408	False	NA	NA	False	NA	NA	NA	107356548	107356796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107356500_107356800
Isoform_28632_43	chr11	+	174	1	Intergenic	novelGene_2245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	107368879	107369053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107368900_107369100
Isoform_28635_125	chr11	+	177	1	Intergenic	novelGene_2246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107377938	107378115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_107377900_107378100
Isoform_28636_24	chr11	-	187	1	Intergenic	novelGene_2247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGGATTG	NA	False	NA	NA	False	NA	NA	NA	107393955	107393768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107393800_107394000
Isoform_28639_14	chr11	-	174	1	Intergenic	novelGene_2248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	107431820	107431646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107431600_107431800
Isoform_2864_216	chr10	-	1348	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	30	0	-16	0	multi-exon	FALSE	canonical	3	30	junction_5	5.05799696849784	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCTCAGGCCTTGTG	4161	False	NA	-2	True	AATAAA	-29	NA	78005586	77997899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
Isoform_28640_13	chr11	-	175	1	Intergenic	novelGene_2249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAATTATCTTAAAAA	6756	False	NA	NA	False	NA	NA	NA	107455308	107455133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107455100_107455300
Isoform_28641_4	chr11	-	173	1	Intergenic	novelGene_2250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAAGAAA	6035	False	NA	NA	False	NA	NA	NA	107456029	107455856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107455900_107456000
Isoform_28644_25	chr11	-	220	1	Intergenic	novelGene_2251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAGATAGGCAAAGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	107470859	107470639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107470600_107470900
Isoform_28645_3	chr11	-	158	1	Intergenic	novelGene_2252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	107473248	107473090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107473100_107473200
Isoform_28648_6	chr11	-	167	1	Intergenic	novelGene_2253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	107500255	107500088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107500100_107500300
Isoform_28651_51	chr11	-	177	1	Intergenic	novelGene_2254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAACAACACTCA	9062	False	NA	NA	False	NA	NA	NA	107565460	107565283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107565300_107565500
Isoform_28652_3	chr11	+	3407	1	ISM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	142451	1	17459	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGAGTGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	107581244	107584651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_107581200_107584700
Isoform_28654_3	chr11	-	473	1	Intergenic	novelGene_1366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	19787877	19787404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_19787400_19787900
Isoform_28656_26	chr11	+	177	1	Intergenic	novelGene_2255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	108779380	108779557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_108779400_108779600
Isoform_28657_5	chr11	-	147	1	Intergenic	novelGene_2256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAAGAAAC	NA	False	NA	62	True	NA	NA	NA	108796229	108796082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_108796100_108796200
Isoform_28666_22	chr11	+	157	1	Intergenic	novelGene_1367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	19852174	19852331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_19852200_19852300
Isoform_28667_25	chr11	+	168	1	Intergenic	novelGene_1368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTGTTTTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	19859742	19859910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_19859700_19859900
Isoform_2867_3	chr10	-	2025	6	NIC	ENSMUSG00000053329.8	novel	1378	7	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	30	junction_4	5.08330601085553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGTCTCAGGCCTTGT	4161	False	NA	-3	True	AATAAA	-28	NA	78005586	77997900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
Isoform_28693_3	chr11	+	172	1	Intergenic	novelGene_2257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTTTTAAAATGAAGGA	94	False	NA	NA	False	NA	NA	NA	109399593	109399765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_109399600_109399800
Isoform_28700_43	chr1	+	176	1	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	12705427	12705603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_12705400_12705600
Isoform_28702_3	chr11	+	1323	1	NIC	ENSMUSG00000020623.12	novel	2068	12	NA	NA	16	-97466	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGCATGGAGAAACTGC	NA	False	NA	NA	False	NA	NA	NA	110289963	110291286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_110290000_110291300
Isoform_28708_21	chr11	-	169	1	Intergenic	novelGene_1369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	19883786	19883617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_19883600_19883800
Isoform_28712_3	chr11	+	192	1	Intergenic	novelGene_2259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCAAGGTTAAGGATGCG	NA	False	NA	NA	False	CATAAA	-37	NA	113316023	113316215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_113316000_113316200
Isoform_28713_13	chr11	+	1942	1	Intergenic	novelGene_2260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113368359	113370301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_113368400_113370300
Isoform_28715_15	chr11	+	176	1	Intergenic	novelGene_2261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCAAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	113478211	113478387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_113478200_113478400
Isoform_28716_16	chr11	-	3405	1	Antisense	novelGene_ENSMUSG00000045671.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTAAGGAGCTGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	19907563	19904158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_19904200_19907600
Isoform_28719_6	chr11	+	172	1	Intergenic	novelGene_2262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAATTAAATT	NA	False	NA	NA	False	NA	NA	NA	113561657	113561829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_113561700_113561800
Isoform_28728_29	chr11	+	178	1	Intergenic	novelGene_2263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	113644357	113644535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_113644400_113644500
Isoform_28729_7	chr11	+	174	1	Intergenic	novelGene_2264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTAAAAATTATGTAA	NA	False	NA	NA	False	NA	NA	NA	113648697	113648871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_113648700_113648900
Isoform_28730_124	chr10	+	181	1	Intergenic	novelGene_1014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	9647	False	NA	NA	False	NA	NA	NA	77467665	77467846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_77467700_77467800
Isoform_28731_6	chr11	-	170	1	Intergenic	novelGene_2265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGATTGGATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	113656619	113656449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_113656400_113656600
Isoform_28732_17	chr11	+	177	1	Intergenic	novelGene_2266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	113662798	113662975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_113662800_113663000
Isoform_28733_12	chr11	-	170	1	Intergenic	novelGene_2267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	5885	False	NA	NA	False	NA	NA	NA	113704225	113704055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_113704100_113704200
Isoform_28734_17	chr11	+	179	1	Intergenic	novelGene_2268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTGTCTGATCCA	NA	False	NA	NA	False	NA	NA	NA	113742026	113742205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_113742000_113742200
Isoform_28738_3	chr11	-	169	1	Intergenic	novelGene_2269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	114478742	114478573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_114478600_114478700
Isoform_28743_9	chr11	-	175	1	Intergenic	novelGene_2270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGGTGATGCCCACAC	NA	False	NA	NA	False	NA	NA	NA	114641982	114641807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_114641800_114642000
Isoform_28745_16	chr11	-	177	1	Intergenic	novelGene_2271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	114690850	114690673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_114690700_114690800
Isoform_28746_9	chr11	+	180	1	Intergenic	novelGene_2272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAAG	5717	False	NA	NA	False	NA	NA	NA	114726114	114726294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_114726100_114726300
Isoform_28747_5	chr11	-	222	1	Intergenic	novelGene_1370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTCTAACCTATTATT	NA	False	NA	NA	False	AATAAA	-29	NA	19954397	19954175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_19954200_19954400
Isoform_28749_77	chr11	-	181	1	Intergenic	novelGene_2273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTTTACA	NA	False	NA	NA	False	NA	NA	NA	114750531	114750350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_114750400_114750500
Isoform_28754_14	chr11	-	1718	1	NIC	ENSMUSG00000020734.14	novel	4279	13	NA	NA	14543	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCTAGCTGCCTCAC	NA	False	NA	NA	False	ATTAAA	-19	NA	115141712	115139994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115140000_115141700
Isoform_28761_15	chr13	-	177	1	Intergenic	novelGene_3293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	8521	False	NA	NA	False	NA	NA	NA	100938408	100938231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_100938200_100938400
Isoform_28762_3	chr11	-	1385	1	NIC	ENSMUSG00000020736.13	novel	858	5	NA	NA	-9	-20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACCAAACGCGA	NA	False	NA	-28	True	AATACA	-28	NA	115382650	115381265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115381300_115382600
Isoform_28766_348	chr9	-	181	1	Intergenic	novelGene_11074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCTTTTATC	NA	False	NA	NA	False	NA	NA	NA	3332705	3332524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_3332500_3332700
Isoform_28767_58	chr11	-	161	1	Intergenic	novelGene_2276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	115400311	115400150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115400200_115400300
Isoform_28768_92	chr11	+	176	1	Intergenic	novelGene_2277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	5744	False	NA	NA	False	NA	NA	NA	115400383	115400559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115400400_115400600
Isoform_28769_91	chr10	-	170	1	Intergenic	novelGene_996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTTAAA	6699	False	NA	NA	False	NA	NA	NA	75791882	75791712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75791700_75791900
Isoform_28773_5	chr5	+	325	1	Intergenic	novelGene_8373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	24462309	24462634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_24462300_24462600
Isoform_28775_5	chr11	+	176	1	Intergenic	novelGene_2278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	6232	False	NA	NA	False	NA	NA	NA	115419059	115419235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115419100_115419200
Isoform_28778_93	chr11	-	178	1	Intergenic	novelGene_2279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACATTTAAAAAAAAA	450	False	NA	NA	False	NA	NA	NA	115420036	115419858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115419900_115420000
Isoform_28779_35	chr4	+	176	1	Intergenic	novelGene_7901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	5907	False	NA	NA	False	NA	NA	NA	127041580	127041756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_127041600_127041800
Isoform_28782_7	chr11	+	381	1	Intergenic	novelGene_2280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCTGTCTTGAAACACC	9955	False	NA	NA	False	AAAACA	-5	NA	115430106	115430487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115430100_115430500
Isoform_28783_13	chr11	-	175	1	Intergenic	novelGene_2281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	115431541	115431366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115431400_115431500
Isoform_28785_23	chr11	-	279	1	Intergenic	novelGene_2282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTAGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	115446121	115445842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115445800_115446100
Isoform_28786_24	chr11	-	202	1	Intergenic	novelGene_2283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	115450484	115450282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115450300_115450500
Isoform_28788_3	chr11	-	4006	1	Intergenic	novelGene_2284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATACACTCATATGTATA	7205	False	NA	NA	False	NA	NA	NA	115466869	115462863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115462900_115466900
Isoform_2879_643	chr10	-	3870	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	1	1	1	-1	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTTGTCTGTGTGTG	NA	False	NA	-6	True	AATACA	-16	NA	78020982	78006743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
Isoform_28791_49	chr11	-	176	1	Intergenic	novelGene_2285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	7734	False	NA	NA	False	NA	NA	NA	115490524	115490348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115490300_115490500
Isoform_28796_4	chr11	-	1308	1	NIC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	0	-2563	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAACCCAAAAATC	NA	False	NA	NA	False	NA	NA	NA	115518971	115517663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_115517700_115519000
Isoform_28801_226	chr11	-	176	1	Intergenic	novelGene_2286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115537278	115537102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115537100_115537300
Isoform_28805_3	chr11	+	158	1	Intergenic	novelGene_2287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTCTGAGACAGGGT	NA	False	NA	NA	False	AATAAA	-10	NA	115601694	115601852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115601700_115601900
Isoform_28807_12	chr11	-	356	1	FSM	ENSMUSG00000083394.3	ENSMUST00000118352.3	483	1	-24	151	-24	-151	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACGACCAGAAGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	115615658	115615302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_115615300_115615700
Isoform_28808_18	chr11	-	234	1	Intergenic	novelGene_1371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGCATTTGTT	NA	False	NA	NA	False	NA	NA	NA	20001864	20001630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_20001600_20001900
Isoform_28809_29	chr11	+	174	1	Intergenic	novelGene_2288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAAAAAAGGTAC	7380	False	NA	NA	False	NA	NA	NA	115620872	115621046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115620900_115621000
Isoform_28810_41	chr11	-	178	1	Intergenic	novelGene_2289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGGTAAAAAAAA	4991	False	NA	NA	False	NA	NA	NA	115623288	115623110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115623100_115623300
Isoform_28812_6	chr11	+	174	1	Intergenic	novelGene_2290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	115628317	115628491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115628300_115628500
Isoform_28813_193	chr11	-	177	1	Intergenic	novelGene_2291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACACC	NA	False	NA	NA	False	NA	NA	NA	115633293	115633116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115633100_115633300
Isoform_28814_4	chr11	-	177	1	Intergenic	novelGene_2292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAGAAAAAA	5284	False	NA	NA	False	NA	NA	NA	115639943	115639766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115639800_115639900
Isoform_28815_240	chr11	-	160	1	Intergenic	novelGene_2293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGAATC	3210	False	NA	NA	False	NA	NA	NA	115642017	115641857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115641900_115642000
Isoform_2883_4	chr10	-	5049	23	NNC	ENSMUSG00000000374.9	novel	5047	23	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.84621741841931	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATGTATTTTTGTAT	NA	False	NA	0	True	ATTAAA	-16	NA	78080481	78022561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_78023929_78024589_78024785_78029192_78029371_78032122_78032293_78033571_78033699_78034877_78034979_78036451_78036682_78037265_78037425_78038713_78038856_78039714_78040227_78043267_78043381_78043725_78043867_78045217_78045310_78046211_78046289_78046597_78046713_78047309_78047457_78050401_78050650_78052983_78053096_78056022_78056219_78058497_78058695_78064612_78064749_78067287_78067370_78080269
Isoform_28836_3	chr11	+	170	1	Intergenic	novelGene_2294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTAGGCAAGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	115747996	115748166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115748000_115748200
Isoform_28837_8	chr11	+	161	1	Intergenic	novelGene_2295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTGAATTCTCAT	NA	False	NA	NA	False	NA	NA	NA	115754804	115754965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115754800_115755000
Isoform_28838_7	chr11	+	201	1	Intergenic	novelGene_1372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGTAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	20020782	20020983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_20020800_20021000
Isoform_28839_86	chr11	+	177	1	Intergenic	novelGene_2296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTTAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	115813580	115813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115813600_115813800
Isoform_2884_13	chr10	-	5001	23	FSM	ENSMUSG00000000374.9	ENSMUST00000000384.8	5047	23	-18	64	-18	-64	multi-exon	FALSE	canonical	2	6	junction_11	3.08823413662964	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTGGAAGTCATAGAT	NA	False	NA	-4	True	AATAAA	-17	NA	78080493	78022622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78023929_78024589_78024785_78029192_78029371_78032121_78032293_78033571_78033699_78034877_78034979_78036451_78036682_78037265_78037425_78038713_78038856_78039714_78040227_78043267_78043381_78043725_78043867_78045217_78045310_78046211_78046289_78046597_78046713_78047309_78047457_78050401_78050650_78052983_78053096_78056022_78056219_78058497_78058695_78064612_78064749_78067287_78067370_78080269
Isoform_28842_34	chr11	+	172	1	Intergenic	novelGene_2297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAACAAA	4400	False	NA	NA	False	NA	NA	NA	115904557	115904729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115904600_115904700
Isoform_28863_110	chr11	+	176	1	Intergenic	novelGene_2298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4339	False	NA	NA	False	NA	NA	NA	115916664	115916840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115916700_115916800
Isoform_28869_55	chr11	-	181	1	Intergenic	novelGene_2299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTCAC	NA	False	NA	NA	False	NA	NA	NA	115981384	115981203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_115981200_115981400
Isoform_2887_11	chr10	-	5360	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	90	-615	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTAGTGCTCTACTT	NA	False	NA	NA	False	ATTAAA	-23	NA	78188186	78105626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
Isoform_28870_15	chr11	+	178	1	Intergenic	novelGene_2300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTCCAAAAAGG	1163	False	NA	NA	False	NA	NA	NA	115984003	115984181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115984000_115984200
Isoform_28872_3	chr11	+	946	1	Antisense	novelGene_ENSMUSG00000020773.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTGTTTTGACCTC	7471	False	NA	NA	False	NA	NA	NA	116000578	116001524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_116000600_116001500
Isoform_28877_3	chr11	+	340	1	Intergenic	novelGene_2301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	116067121	116067461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_116067100_116067500
Isoform_2888_100	chr10	-	3591	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	93	4	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCTTTTTCTCTTTTTC	NA	False	NA	-9	True	AATAAA	-9	NA	78188183	78107392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
Isoform_28882_156	chr11	+	177	1	Intergenic	novelGene_2302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	116167234	116167411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_116167200_116167400
Isoform_28884_24	chr11	+	176	1	Intergenic	novelGene_2303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	116169034	116169210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_116169000_116169200
Isoform_28887_28	chr11	-	175	1	Intergenic	novelGene_2304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGCCCAACCAAGA	4159	False	NA	NA	False	NA	NA	NA	116243048	116242873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_116242900_116243000
Isoform_28888_37	chr14	-	172	1	Intergenic	novelGene_3494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTATCT	NA	False	NA	NA	False	NA	NA	NA	47691532	47691360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_47691400_47691500
Isoform_28889_7	chr9	+	186	1	Intergenic	novelGene_11312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	57557050	57557236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_57557000_57557200
Isoform_28891_109	chr11	-	177	1	Intergenic	novelGene_1296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	3431554	3431377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_3431400_3431600
Isoform_28892_5	chr11	-	2168	1	Intergenic	novelGene_1373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTTTTCTTTTTTA	266	False	NA	NA	False	AATAAA	-25	NA	20089376	20087208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_20087200_20089400
Isoform_28900_4	chr11	+	2327	1	FSM	ENSMUSG00000081346.2	ENSMUST00000121917.2	223	1	-1995	-109	-1995	109	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATACTCAAAAAAAAATCT	NA	False	NA	NA	False	AATAAA	-7	NA	20090572	20092899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_20090600_20092900
Isoform_28905_13	chr11	+	166	1	Intergenic	novelGene_2307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTATTTTATTTTTTT	NA	False	NA	14	True	NA	NA	NA	116516699	116516865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_116516700_116516900
Isoform_28907_331	chr11	+	177	1	Intergenic	novelGene_2308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAAAGC	NA	False	NA	NA	False	NA	NA	NA	116527592	116527769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_116527600_116527800
Isoform_28908_20	chr1	+	174	1	Intergenic	novelGene_564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167143447	167143621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_167143400_167143600
Isoform_28909_4	chr11	-	1407	2	NNC	ENSMUSG00000057286.7	novel	3006	2	NA	NA	-7	-2365	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9118	False	NA	NA	False	NA	NA	NA	116570511	116569079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr11_-_116570408_116570432
Isoform_28912_83	chr11	+	178	1	Antisense	novelGene_ENSMUSG00000085035.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	20095971	20096149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_20096000_20096100
Isoform_28915_14	chr11	-	178	1	Intergenic	novelGene_2309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGTCTGGAG	9911	False	NA	NA	False	NA	NA	NA	116670687	116670509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_116670500_116670700
Isoform_28922_52	chr11	-	3189	1	NIC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	1	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	6004	False	NA	-9	True	ATTAAA	-27	NA	116743919	116740730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_116740700_116743900
Isoform_28938_5	chr11	+	492	1	NIC	ENSMUSG00000090266.11	novel	502	2	NA	NA	4864	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCAAGATTGCACCTCCT	NA	False	NA	5	True	AATAAA	-18	NA	116744590	116745082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_116744600_116745100
Isoform_28940_6	chr11	-	190	1	Intergenic	novelGene_1374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACAAAAAATCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	20097785	20097595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_20097600_20097800
Isoform_28943_7	chr11	-	185	1	Intergenic	novelGene_2310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTCAAGGCCAGCCT	531	False	NA	NA	False	NA	NA	NA	116774917	116774732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_116774700_116774900
Isoform_28945_47	chr11	+	177	1	Intergenic	novelGene_2311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	116800589	116800766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_116800600_116800800
Isoform_28948_8	chr11	+	176	1	Intergenic	novelGene_1375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAGTGACAG	NA	False	NA	NA	False	NA	NA	NA	20099112	20099288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_20099100_20099300
Isoform_28949_4	chr11	-	169	1	Intergenic	novelGene_2312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	116929849	116929680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_116929700_116929800
Isoform_28950_105	chr11	-	174	1	Intergenic	novelGene_2313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAATCAACCCCCAAA	NA	False	NA	NA	False	NA	NA	NA	116936306	116936132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_116936100_116936300
Isoform_28954_5	chr8	-	187	1	Intergenic	novelGene_10619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATTTAA	NA	False	NA	NA	False	NA	NA	NA	41629011	41628824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_41628800_41629000
Isoform_28955_30	chr11	+	2154	1	FSM	ENSMUSG00000086859.5	ENSMUST00000182811.2	2153	1	0	-1	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	894	False	NA	20	True	AATAAA	-16	NA	116967627	116969781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_116967600_116969800
Isoform_2896_34	chr10	-	3748	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	-12	9	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78188335	78107387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
Isoform_28960_3	chr11	+	2737	1	Intergenic	novelGene_2314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	116994410	116997147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_116994400_116997100
Isoform_28980_3	chr11	-	177	1	Intergenic	novelGene_2315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACCAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117272328	117272151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117272200_117272300
Isoform_28985_7	chr11	-	266	1	Intergenic	novelGene_2316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGCTTTGTGTCAACA	NA	False	NA	NA	False	NA	NA	NA	117475813	117475547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117475500_117475800
Isoform_28986_4	chr11	+	2780	1	Intergenic	novelGene_2317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117477149	117479929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_117477100_117479900
Isoform_28988_16	chr11	-	175	1	Intergenic	novelGene_2318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGGGGGCCTTAT	NA	False	NA	NA	False	NA	NA	NA	117521467	117521292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117521300_117521500
Isoform_28989_4	chr11	+	186	1	Intergenic	novelGene_2319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGACAGGGAGGCT	8190	False	NA	NA	False	NA	NA	NA	117531725	117531911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_117531700_117531900
Isoform_2899_140	chr10	-	3503	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	93	2384	93	1	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAATGCTTTTTCTCTTT	NA	False	NA	-12	True	AATAAA	-6	NA	78188183	78107395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
Isoform_28990_445	chr11	-	161	1	Intergenic	novelGene_2320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAATTCAGCATCAA	NA	False	NA	-7	True	NA	NA	NA	117541384	117541223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117541200_117541400
Isoform_28992_3	chr11	-	173	1	Intergenic	novelGene_2321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAATCTTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	117593772	117593599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117593600_117593800
Isoform_28995_3	chr11	-	174	1	Antisense	novelGene_ENSMUSG00000025571.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGTTAAAAC	NA	False	NA	NA	False	NA	NA	NA	117643256	117643082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_117643100_117643300
Isoform_28996_10	chr14	-	170	1	Intergenic	novelGene_3624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATCTTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	67751361	67751191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_67751200_67751400
Isoform_28997_3	chr11	+	227	1	Intergenic	novelGene_2322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAGTGAGTCAGGCACG	NA	False	NA	NA	False	NA	NA	NA	117684622	117684849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_117684600_117684800
Isoform_2900_29	chr10	-	3583	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	13	2384	13	1	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAATGCTTTTTCTCTTT	NA	False	NA	-12	True	AATAAA	-6	NA	78188263	78107395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
Isoform_29001_5	chr11	+	151	1	Intergenic	novelGene_2323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATGTAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	117724298	117724449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_117724300_117724400
Isoform_29002_8	chr11	-	176	1	Intergenic	novelGene_2324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117728846	117728670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117728700_117728800
Isoform_29003_3	chr11	-	181	1	Intergenic	novelGene_2325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAGTTTTTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	117735128	117734947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117734900_117735100
Isoform_29005_6	chr11	-	199	1	Intergenic	novelGene_2326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAGTGAAGGATCCT	5667	False	NA	NA	False	NA	NA	NA	117776546	117776347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117776300_117776500
Isoform_29007_11	chr11	-	181	1	Intergenic	novelGene_2327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTGAAATGGAT	3908	False	NA	NA	False	NA	NA	NA	117815215	117815034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117815000_117815200
Isoform_29008_45	chr17	+	183	1	Intergenic	novelGene_5013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47096108	47096291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47096100_47096300
Isoform_2901_154	chr10	-	1457	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	93	4430	93	3	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGACACTTAGAGACT	NA	False	NA	-15	True	ATTAAA	-23	NA	78188183	78109441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
Isoform_2902_33	chr10	-	1544	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	12	4424	12	9	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTTAGAGACTATTTTT	NA	False	NA	-9	True	ATTAAA	-29	NA	78188264	78109435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
Isoform_29027_10	chr11	+	178	1	Intergenic	novelGene_2329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACTAGTATATTATT	NA	False	NA	NA	False	NA	NA	NA	117875752	117875930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_117875800_117875900
Isoform_29029_20	chr11	-	174	1	Intergenic	novelGene_2330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	117893786	117893612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_117893600_117893800
Isoform_29030_343	chr11	-	173	1	Intergenic	novelGene_1376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4845	False	NA	NA	False	NA	NA	NA	20148930	20148757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_20148800_20148900
Isoform_29033_75	chr11	+	181	1	Intergenic	novelGene_2332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATATATTCAGA	NA	False	NA	NA	False	NA	NA	NA	118125113	118125294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_118125100_118125300
Isoform_29035_7	chr11	-	1711	1	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	7	-4668	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118180999	118179288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_118179300_118181000
Isoform_29036_6	chr11	-	1772	1	NIC	ENSMUSG00000033909.18	novel	5609	21	NA	NA	-5	-4670	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAACCAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	118181062	118179290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_118179300_118181100
Isoform_29037_268	chr19	-	177	1	Intergenic	novelGene_5665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8842808	8842631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_8842600_8842800
Isoform_29039_4	chr11	-	4969	1	Intergenic	novelGene_2334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTCTTGATTATGA	NA	False	NA	NA	False	NA	NA	NA	118364950	118359981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_118360000_118365000
Isoform_2904_26	chr10	-	1618	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	-59	4421	-12	12	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGAGACTATTTTTCTT	NA	False	NA	-6	True	ATTAAA	-32	NA	78188335	78109432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
Isoform_29040_5	chr11	-	179	1	Intergenic	novelGene_2335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAATCTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	118363341	118363162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_118363200_118363300
Isoform_29042_3	chr11	-	175	1	Intergenic	novelGene_1377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20158026	20157851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_20157900_20158000
Isoform_29044_61	chr11	+	195	1	Intergenic	novelGene_2336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGATTCTTTTAAAA	NA	False	NA	2	True	NA	NA	NA	118905838	118906033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_118905800_118906000
Isoform_29048_27	chr11	-	177	1	Intergenic	novelGene_2337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	118922304	118922127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_118922100_118922300
Isoform_29050_4	chr11	-	4035	1	ISM	ENSMUSG00000039976.5	ENSMUST00000036113.4	6986	12	81419	1	74896	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATGGTCCTGTGCCTTG	3015	False	NA	-2	True	AATAAA	-14	NA	119037906	119033871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_-_119033900_119037900
Isoform_29054_53	chr11	+	237	1	Intergenic	novelGene_2338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7687	False	NA	NA	False	NA	NA	NA	119097073	119097310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_119097100_119097300
Isoform_29055_5	chr11	-	604	1	NIC	ENSMUSG00000039976.5	novel	6986	12	NA	NA	13	-17242	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCCTCAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	119119312	119118708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_119118700_119119300
Isoform_29059_62	chr11	-	181	1	Intergenic	novelGene_1378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20172119	20171938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_20171900_20172100
Isoform_29061_70	chr11	+	179	1	Intergenic	novelGene_2339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAATTCCACG	181	False	NA	NA	False	NA	NA	NA	119275076	119275255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_119275100_119275300
Isoform_2907_24	chr10	-	3650	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	-46	2376	1	9	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78188322	78107387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
Isoform_29072_3	chr11	+	1972	1	NIC	ENSMUSG00000039850.17	novel	5070	9	NA	NA	1	-7470	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAGCTAAAGTAAAAAAAAA	6283	False	NA	NA	False	TTTAAA	-17	NA	119382201	119384173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_119382200_119384200
Isoform_29073_3	chr11	+	1721	1	NIC	ENSMUSG00000039850.17	novel	5070	9	NA	NA	4	-7463	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTAAAAAAAAATATATTT	6541	False	NA	NA	False	TTTAAA	-24	NA	119382459	119384180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_119382500_119384200
Isoform_29074_4	chr11	+	176	1	Intergenic	novelGene_2340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATGTCAGTATATG	9786	False	NA	NA	False	NA	NA	NA	119385704	119385880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_119385700_119385900
Isoform_29075_18	chr11	-	172	1	Intergenic	novelGene_1379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	20180918	20180746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_20180700_20180900
Isoform_29076_17	chr11	+	200	1	Genic_Genomic	ENSMUSG00000039850.17	novel	NA	NA	NA	NA	9268	8	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTACCAACTGAATGAC	4126	False	NA	NA	False	AAGAAA	-5	NA	119402071	119402271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_119402100_119402300
Isoform_2908_12	chr10	-	5274	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	91	615	91	-615	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTAGTGCTCTACTT	NA	False	NA	NA	False	ATTAAA	-23	NA	78188185	78105626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
Isoform_29080_3	chr11	+	212	1	Intergenic	novelGene_2341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGCTAAATATAAGTC	NA	False	NA	NA	False	NA	NA	NA	119794528	119794740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_119794500_119794700
Isoform_29081_27	chr11	-	175	1	Intergenic	novelGene_2342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCTGATATTTAT	NA	False	NA	NA	False	NA	NA	NA	119841076	119840901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_119840900_119841100
Isoform_29082_19	chr11	-	170	1	Intergenic	novelGene_2343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATAGAG	NA	False	NA	NA	False	NA	NA	NA	119919981	119919811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_119919800_119920000
Isoform_29083_6	chr11	+	173	1	Intergenic	novelGene_2344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAACAAAACAAAACAAAA	5211	False	NA	NA	False	NA	NA	NA	119921912	119922085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_119921900_119922100
Isoform_29084_13	chr11	-	193	1	Intergenic	novelGene_2345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAGATGTGGAGA	NA	False	NA	NA	False	NA	NA	NA	119922346	119922153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_119922200_119922300
Isoform_29085_49	chr11	-	175	1	Intergenic	novelGene_2346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTTTTTTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	119944726	119944551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_119944600_119944700
Isoform_29089_19	chr11	+	1670	1	Antisense	novelGene_ENSMUSG00000061306.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120032049	120033719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_120032000_120033700
Isoform_29090_7	chr11	-	177	1	Intergenic	novelGene_2347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCTGGTGAGATGGCTC	2220	False	NA	NA	False	NA	NA	NA	120044948	120044771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_120044800_120044900
Isoform_29091_15	chr11	-	169	1	Intergenic	novelGene_2348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAAAAAGAGTTGAC	320	False	NA	NA	False	NA	NA	NA	120046848	120046679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_120046700_120046800
Isoform_29092_8	chr11	-	1998	1	Genic_Genomic	ENSMUSG00000075389.4	novel	NA	NA	NA	NA	-105	-253	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTCTCTCTGG	6038	False	NA	-1	True	AATAAA	-17	NA	120080783	120078785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_120078800_120080800
Isoform_29093_6	chr11	-	2044	1	Genic_Genomic	ENSMUSG00000075389.4	novel	NA	NA	NA	NA	-152	-254	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTTTTTTTCTCTCTG	5991	False	NA	-2	True	AATAAA	-16	NA	120080830	120078786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_120078800_120080800
Isoform_29095_9	chr11	+	177	1	Intergenic	novelGene_2349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACAATAG	804	False	NA	NA	False	NA	NA	NA	120099750	120099927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120099800_120099900
Isoform_29096_5	chr11	-	619	1	NIC	ENSMUSG00000044066.15	novel	2788	3	NA	NA	-5	-7282	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAATAATAAT	3050	False	NA	NA	False	NA	NA	NA	20199423	20198804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_20198800_20199400
Isoform_29098_14	chr11	-	1731	1	NIC	ENSMUSG00000043993.7	novel	1588	2	NA	NA	53	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGCAGTATTGCTACCG	NA	False	NA	1	True	NA	NA	NA	120122358	120120627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120120600_120122400
Isoform_29101_37	chr5	-	176	1	Intergenic	novelGene_8562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	75268515	75268339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_75268300_75268500
Isoform_29104_50	chr11	+	179	1	Intergenic	novelGene_2350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTTAATTCCTGATCC	1750	False	NA	8	True	NA	NA	NA	120235701	120235880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120235700_120235900
Isoform_29123_13	chr11	+	163	1	Intergenic	novelGene_2351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGATGCAGCC	NA	False	NA	NA	False	NA	NA	NA	120247951	120248114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120248000_120248100
Isoform_29124_5	chr11	-	2620	1	Genic_Genomic	ENSMUSG00000025384.16	novel	NA	NA	NA	NA	-5	20	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTTAGAAGGAAAGACCCA	NA	False	NA	NA	False	AAAACA	-32	NA	120269595	120266975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_120267000_120269600
Isoform_29128_7	chr11	-	867	1	Intergenic	novelGene_2352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120352303	120351436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_120351400_120352300
Isoform_29130_18	chr9	+	176	1	Intergenic	novelGene_11634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106045941	106046117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_106045900_106046100
Isoform_29141_6	chr11	+	233	1	Intergenic	novelGene_2353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTTAAATTTTTGACT	2019	False	NA	NA	False	AAGAAA	-15	NA	120460139	120460372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120460100_120460400
Isoform_29142_11	chr11	+	181	1	Intergenic	novelGene_2354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCCCAGCACTT	2316	False	NA	NA	False	NA	NA	NA	120460436	120460617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120460400_120460600
Isoform_29157_18	chr11	-	1595	1	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	14	-853	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120508720	120507125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120507100_120508700
Isoform_29186_3	chr11	+	2441	1	Antisense	novelGene_ENSMUSG00000051510.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGGTTTCTGTTACTT	NA	False	NA	15	True	NA	NA	NA	120523516	120525957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_120523500_120526000
Isoform_29188_6	chr11	+	632	1	Intergenic	novelGene_2355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGATCAAGTTTTCATT	NA	False	NA	NA	False	AGTAAA	-15	NA	120524575	120525207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120524600_120525200
Isoform_29192_4	chr11	+	176	1	Intergenic	novelGene_2357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGAAATTGGC	9402	False	NA	NA	False	NA	NA	NA	120544141	120544317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120544100_120544300
Isoform_29193_3	chr11	-	860	1	Antisense	novelGene_ENSMUSG00000025142.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTTTTTTTATTGTG	9593	False	NA	NA	False	NA	NA	NA	120564116	120563256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_120563300_120564100
Isoform_29201_8	chr5	-	375	1	FSM	ENSMUSG00000096810.2	ENSMUST00000179228.2	1002	1	808	-181	808	181	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAATTTCTACAAA	NA	False	NA	NA	False	AATAAA	-15	NA	13092593	13092218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr5_-_13092200_13092600
Isoform_29207_61	chr11	-	175	1	Intergenic	novelGene_2358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	674	False	NA	NA	False	NA	NA	NA	120580918	120580743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_120580700_120580900
Isoform_29208_10	chr11	-	3255	1	Antisense	novelGene_ENSMUSG00000025142.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAACAAACAAAAAACCAG	1550	False	NA	NA	False	NA	NA	NA	120596966	120593711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_120593700_120597000
Isoform_29209_11	chr11	-	2796	1	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604563	120601767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_120601800_120604600
Isoform_29211_3426	chr11	+	1599	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	0	27	0	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	3426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	120653619	120655218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_120653600_120655200
Isoform_2923_546	chr10	-	1949	13	FSM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	37	-2	-14	0	multi-exon	FALSE	canonical	3	782	junction_1	71.0948115000119	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTCCCATTTTT	NA	False	NA	-17	True	AATAAA	-21	NA	78248840	78236217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
Isoform_29236_11	chr11	+	210	1	Intergenic	novelGene_2359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGATTCACTCAGTACT	6324	False	NA	NA	False	AAGAAA	-15	NA	120728578	120728788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120728600_120728800
Isoform_29237_26	chr11	+	2184	1	Intergenic	novelGene_2360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	170	False	NA	NA	False	NA	NA	NA	120731042	120733226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120731000_120733200
Isoform_29238_3	chr11	+	166	1	Intergenic	novelGene_2361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	4880	False	NA	NA	False	NA	NA	NA	120735752	120735918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120735800_120735900
Isoform_29239_10	chr11	-	3505	1	Intergenic	novelGene_2362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAAGAA	4478	False	NA	NA	False	NA	NA	NA	120743523	120740018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_120740000_120743500
Isoform_29240_3	chr11	+	178	1	Intergenic	novelGene_2363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAAAATAACT	NA	False	NA	NA	False	NA	NA	NA	120783842	120784020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120783800_120784000
Isoform_29243_85	chr11	+	177	1	Intergenic	novelGene_2364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	120817630	120817807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_120817600_120817800
Isoform_29254_6	chr11	+	164	1	Intergenic	novelGene_1380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAACCCTGACT	NA	False	NA	NA	False	NA	NA	NA	20372046	20372210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_20372000_20372200
Isoform_29256_20	chr7	-	177	1	Intergenic	novelGene_9782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAAAGTGGC	9946	False	NA	NA	False	NA	NA	NA	4714582	4714405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_4714400_4714600
Isoform_29265_8	chr11	-	174	1	Intergenic	novelGene_2365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGACACTATC	NA	False	NA	NA	False	NA	NA	NA	121100370	121100196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121100200_121100400
Isoform_29267_87	chr11	-	180	1	Intergenic	novelGene_2366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGTAAAATAG	NA	False	NA	NA	False	NA	NA	NA	121131228	121131048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121131000_121131200
Isoform_29268_62	chr11	+	176	1	Intergenic	novelGene_2367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	121138190	121138366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_121138200_121138400
Isoform_29269_25	chr11	+	173	1	Intergenic	novelGene_1381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAGTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20398408	20398581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_20398400_20398600
Isoform_29276_51	chr11	-	171	1	Intergenic	novelGene_2368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	121215382	121215211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121215200_121215400
Isoform_29279_5	chr11	+	174	1	Intergenic	novelGene_1382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGATTTTATT	NA	False	NA	NA	False	NA	NA	NA	20402403	20402577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_20402400_20402600
Isoform_29280_4	chr11	+	172	1	Antisense	novelGene_ENSMUSG00000025173.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTGC	2292	False	NA	NA	False	NA	NA	NA	121239603	121239775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_121239600_121239800
Isoform_29282_4	chr11	+	178	1	Intergenic	novelGene_2369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	121259144	121259322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_121259100_121259300
Isoform_29283_3	chr3	+	181	1	Intergenic	novelGene_7086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87789286	87789467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_87789300_87789500
Isoform_29284_8	chr11	-	172	1	Intergenic	novelGene_2370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	5906	False	NA	NA	False	NA	NA	NA	121667218	121667046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121667000_121667200
Isoform_29286_6	chr11	-	1282	1	Intergenic	novelGene_2377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121816143	121814861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121814900_121816100
Isoform_29287_7	chr11	-	3893	1	Intergenic	novelGene_2380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAATACACCAAGGTAT	NA	False	NA	NA	False	NA	NA	NA	121847545	121843652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_121843700_121847500
Isoform_29290_15	chr11	+	180	1	Intergenic	novelGene_1297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3566504	3566684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_3566500_3566700
Isoform_29293_9	chr11	+	1893	1	ISM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	107793	2	3972	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCTCACAGTTTTCTT	7084	False	NA	15	True	AATAAA	-15	NA	20601126	20603019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr11_+_20601100_20603000
Isoform_29295_3	chr11	-	3934	1	Intergenic	novelGene_1383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20613916	20609982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_20610000_20613900
Isoform_29314_10	chr18	-	176	1	Intergenic	novelGene_5529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAACCAAACAAA	2147	False	NA	NA	False	NA	NA	NA	77765631	77765455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77765500_77765600
Isoform_29315_6	chr11	+	162	1	Intergenic	novelGene_1384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	3394	False	NA	NA	False	NA	NA	NA	21100761	21100923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_21100800_21100900
Isoform_29318_13	chr11	-	162	1	Intergenic	novelGene_1385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	21195482	21195320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_21195300_21195500
Isoform_2932_181	chr10	-	5072	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	48	4	48	-4	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTTAGTGTGGTCAT	6850	False	NA	-6	True	AATAAA	-13	NA	78300761	78272581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
Isoform_29321_97	chr11	+	1971	1	Antisense	novelGene_ENSMUSG00000056579.19_AS_novelGene_ENSMUSG00002075685.1_AS_novelGene_ENSMUSG00002076847.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAACCCCCCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3595522	3597493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_3595500_3597500
Isoform_29323_3	chr11	-	2891	1	FSM	ENSMUSG00000056579.19	ENSMUST00000193809.2	1612	1	652	-1931	21	709	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3599021	3596130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_3596100_3599000
Isoform_29325_13	chr11	+	976	1	Antisense	novelGene_ENSMUSG00000056579.19_AS_novelGene_ENSMUSG00002075685.1_AS_novelGene_ENSMUSG00002076847.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCCAAACATTTTC	NA	False	NA	NA	False	NA	NA	NA	3596556	3597532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_3596600_3597500
Isoform_29328_5	chr11	-	173	1	Intergenic	novelGene_1386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21618274	21618101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_21618100_21618300
Isoform_29329_4	chr11	-	378	1	Intergenic	novelGene_1298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3603617	3603239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_3603200_3603600
Isoform_2933_38	chr10	-	5160	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-39	3	-39	-3	multi-exon	TRUE	canonical	3	285	junction_4	40.3910881259715	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAGTGTGGTCATT	6763	False	NA	-5	True	AATAAA	-14	NA	78300848	78272580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
Isoform_29332_6	chr4	-	200	1	Intergenic	novelGene_7667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACATGACTAGGAAACCA	NA	False	NA	NA	False	NA	NA	NA	94542061	94541861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_94541900_94542100
Isoform_29333_5	chr11	-	172	1	Intergenic	novelGene_1387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAGAAGGAGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	22726567	22726395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_22726400_22726600
Isoform_29336_13	chr11	+	175	1	Intergenic	novelGene_1388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAAGTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	22790486	22790661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_22790500_22790700
Isoform_29340_39	chr11	+	2888	2	Genic_Genomic	ENSMUSG00000044068.8	novel	4492	1	NA	NA	-4	394	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTGTCTGAATCTGT	NA	False	NA	10	True	AATATA	-16	NA	22922000	22924908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_+_22923177_22923196
Isoform_29343_29	chr11	+	2876	1	FSM	ENSMUSG00000044068.8	ENSMUST00000229075.2	1287	1	-1191	-398	32	398	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTGAATCTGTTTTA	NA	False	NA	14	True	AATATA	-20	NA	22922036	22924912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_22922000_22924900
Isoform_2935_293	chr10	-	1274	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-7	3857	-7	-3857	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTGATTCACAACCAT	6795	False	NA	1	True	TTTAAA	-22	NA	78300816	78276434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
Isoform_29352_6	chr11	+	204	1	Intergenic	novelGene_1389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTTTTTAAAAAAAAAGA	4021	False	NA	NA	False	NA	NA	NA	23036864	23037068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_23036900_23037100
Isoform_29353_33	chr11	+	221	1	Intergenic	novelGene_1390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTTATTTGACTCCT	NA	False	NA	NA	False	NA	NA	NA	23047478	23047699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_23047500_23047700
Isoform_29355_12	chr11	-	180	1	Intergenic	novelGene_1391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATTAACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	23077580	23077400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23077400_23077600
Isoform_29356_122	chr11	-	198	1	Intergenic	novelGene_1392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTTTTTTCTTTTGAGC	NA	False	NA	NA	False	NA	NA	NA	23107262	23107064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23107100_23107300
Isoform_29358_4	chr2	+	170	1	Intergenic	novelGene_5961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGAAAATGCT	NA	False	NA	NA	False	NA	NA	NA	7199981	7200151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_7200000_7200200
Isoform_29361_35	chr11	-	1176	1	Intergenic	novelGene_1393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTTAT	NA	False	NA	NA	False	NA	NA	NA	23223462	23222286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23222300_23223500
Isoform_29364_7	chr11	+	180	1	Intergenic	novelGene_1292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	3147312	3147492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_3147300_3147500
Isoform_29365_10	chr11	-	176	1	Intergenic	novelGene_1394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATACATGAGTACACCAC	7657	False	NA	NA	False	NA	NA	NA	23249825	23249649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23249600_23249800
Isoform_29366_14	chr11	+	225	1	Intergenic	novelGene_1395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCATTTCATACATGT	NA	False	NA	NA	False	NA	NA	NA	23252610	23252835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_23252600_23252800
Isoform_29367_4	chr11	-	418	1	Intergenic	novelGene_1396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAAAAAAAAAAGAGTAAT	1887	False	NA	NA	False	NA	NA	NA	23255595	23255177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23255200_23255600
Isoform_29368_7	chr11	-	252	1	Intergenic	novelGene_1397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGAGGATCCAGATTCAAT	1886	False	NA	NA	False	NA	NA	NA	23255596	23255344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23255300_23255600
Isoform_29371_57	chr11	-	172	1	Intergenic	novelGene_1398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGTAAAATACAT	NA	False	NA	NA	False	NA	NA	NA	23271587	23271415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23271400_23271600
Isoform_29372_4	chr11	-	169	1	Intergenic	novelGene_1399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAAACC	NA	False	NA	NA	False	NA	NA	NA	23282307	23282138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23282100_23282300
Isoform_29373_112	chr11	-	179	1	Intergenic	novelGene_1400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGGAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	23307471	23307292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23307300_23307500
Isoform_29374_10	chr11	+	199	1	Intergenic	novelGene_1401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGTAGAGGTGTTGAAAA	3117	False	NA	NA	False	AAGAAA	-6	NA	23310067	23310266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_23310100_23310300
Isoform_29375_25	chr11	-	1418	1	Intergenic	novelGene_1402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	23322418	23321000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23321000_23322400
Isoform_29377_26	chr11	+	195	1	Intergenic	novelGene_1300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATAGTTGAAAGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	3776952	3777147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_3777000_3777100
Isoform_29378_9	chr11	-	176	1	Intergenic	novelGene_1403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATATTTTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	23452804	23452628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23452600_23452800
Isoform_29379_14	chr11	+	176	1	Intergenic	novelGene_1404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	23453956	23454132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_23454000_23454100
Isoform_29380_15	chr11	+	158	1	Intergenic	novelGene_1405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	23468243	23468401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_23468200_23468400
Isoform_29384_8	chr11	+	998	1	Antisense	novelGene_ENSMUSG00002075061.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23576238	23577236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_+_23576200_23577200
Isoform_29385_7	chr11	-	1620	1	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	-52	-8199	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATAAACCAA	NA	False	NA	NA	False	NA	NA	NA	23615904	23614284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_-_23614300_23615900
Isoform_29387_13	chr11	+	173	1	Intergenic	novelGene_1406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATTTCAGGCACAT	NA	False	NA	NA	False	NA	NA	NA	23680576	23680749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_23680600_23680700
Isoform_29389_26	chr11	-	152	1	Intergenic	novelGene_1407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAACCCTAA	NA	False	NA	NA	False	NA	NA	NA	23701602	23701450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_23701400_23701600
Isoform_2939_48	chr10	-	1308	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-41	3857	-41	-3857	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTGATTCACAACCAT	6761	False	NA	1	True	TTTAAA	-22	NA	78300850	78276434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
Isoform_29393_7	chr11	+	219	1	Intergenic	novelGene_1408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAGAAGTGGTATTATA	NA	False	NA	NA	False	AAAAAG	-28	NA	23838092	23838311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_23838100_23838300
Isoform_29394_14	chr11	+	177	1	Intergenic	novelGene_1409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAGAAGCTAAG	6391	False	NA	NA	False	NA	NA	NA	23901190	23901367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_23901200_23901400
Isoform_29395_7	chr11	+	220	1	Intergenic	novelGene_1410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATGATGTGTCTGCG	NA	False	NA	NA	False	ATTAAA	-14	NA	24055896	24056116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_24055900_24056100
Isoform_29396_7	chr11	+	175	1	Intergenic	novelGene_1411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATTCATAGTAG	1627	False	NA	NA	False	NA	NA	NA	24159932	24160107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_24159900_24160100
Isoform_29398_3	chr11	-	174	1	Intergenic	novelGene_1412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGCTACTTAGAACAG	NA	False	NA	NA	False	NA	NA	NA	24656769	24656595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_24656600_24656800
Isoform_29399_15	chr11	+	178	1	Intergenic	novelGene_1413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGACTTAAT	NA	False	NA	NA	False	NA	NA	NA	24797305	24797483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_24797300_24797500
Isoform_29401_19	chr11	-	174	1	Intergenic	novelGene_1414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	25973838	25973664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_25973700_25973800
Isoform_29403_281	chr7	-	175	1	Intergenic	novelGene_10246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101944016	101943841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101943800_101944000
Isoform_29405_6	chr11	-	679	1	Antisense	novelGene_ENSMUSG00000004018.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTATATTGTATGCT	NA	False	NA	-21	True	AATAAA	-15	NA	26337443	26336764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr11_-_26336800_26337400
Isoform_29406_9	chr11	-	2601	1	Intergenic	novelGene_1415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	26364696	26362095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_26362100_26364700
Isoform_29413_92	chr11	-	220	1	Intergenic	novelGene_1301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAATTCCTTTATTA	1898	False	NA	NA	False	NA	NA	NA	3893255	3893035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_3893000_3893300
Isoform_29414_5	chr11	-	1922	1	Genic_Genomic	ENSMUSG00000086725.2	novel	NA	NA	NA	NA	821	93	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATTTTTATTGCGTG	NA	False	NA	NA	False	AATACA	-18	NA	29122737	29120815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr11_-_29120800_29122700
Isoform_29416_11	chr11	-	176	1	Intergenic	novelGene_1416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAATACCCTAAAAC	NA	False	NA	NA	False	NA	NA	NA	29376544	29376368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_29376400_29376500
Isoform_29417_9	chr11	-	176	1	Intergenic	novelGene_1302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8402	False	NA	NA	False	NA	NA	NA	3919117	3918941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_3918900_3919100
Isoform_29418_4	chr11	+	171	1	Intergenic	novelGene_1417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGAGTTTTATTGCT	NA	False	NA	NA	False	NA	NA	NA	29438383	29438554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_29438400_29438600
Isoform_29419_7	chr11	+	1923	1	NIC	ENSMUSG00000020459.15	novel	741	5	NA	NA	3	-1846	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29476459	29478382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr11_+_29476500_29478400
Isoform_29421_4	chr11	-	196	1	Intergenic	novelGene_1418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29488261	29488065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_29488100_29488300
Isoform_29424_43	chr1	-	177	1	Intergenic	novelGene_592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATACTAAGATG	NA	False	NA	NA	False	NA	NA	NA	171260801	171260624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_171260600_171260800
Isoform_29425_8	chr11	+	168	1	Intergenic	novelGene_1420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29543977	29544145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_29544000_29544100
Isoform_29426_101	chr11	+	181	1	Intergenic	novelGene_1421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29583538	29583719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_29583500_29583700
Isoform_29427_3	chr11	+	170	1	Intergenic	novelGene_1422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTTTTTAAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	29613169	29613339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_29613200_29613300
Isoform_29428_790	chr11	+	206	1	Intergenic	novelGene_1423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	790	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGCCGCAGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	29616743	29616949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_29616700_29616900
Isoform_29429_6	chr11	-	175	1	Intergenic	novelGene_1303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATAATAACAATTG	NA	False	NA	NA	False	NA	NA	NA	3987304	3987129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_3987100_3987300
Isoform_2943_59	chr10	-	3241	8	FSM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	45	2	45	-2	multi-exon	TRUE	canonical	3	17	junction_5	4.14039335605413	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGACTGAGTCCTT	NA	False	NA	-1	True	AATAAA	-13	NA	78427753	78420338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
Isoform_29430_3	chr11	+	2265	1	Intergenic	novelGene_1424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	29634581	29636846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_29634600_29636800
Isoform_2944_3	chr10	-	2193	7	FSM	ENSMUSG00000005355.10	ENSMUST00000005488.9	2336	7	136	7	136	-1	multi-exon	FALSE	canonical	2	2	junction_1	2.21108319357027	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAATGTGTTAGAATCT	NA	False	NA	NA	False	AGTAAA	-17	NA	78553992	78547831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78549276_78549823_78549928_78550081_78550232_78550768_78550995_78551094_78551245_78551653_78551721_78553940
Isoform_29441_3	chr11	+	174	1	Intergenic	novelGene_1304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	4007667	4007841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4007700_4007800
Isoform_2945_12	chr10	-	4250	6	FSM	ENSMUSG00000060301.7	ENSMUST00000039271.7	4229	6	-21	0	-21	0	multi-exon	FALSE	canonical	1	4	junction_1	2.33238075793812	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCAGGATATTTTATAA	NA	False	NA	0	True	NA	NA	NA	78933455	78900207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78903886_78904467_78904563_78924120_78924214_78928245_78928339_78930264_78930392_78933291
Isoform_29450_981	chr12	-	3471	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	41	1	41	-1	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTTTGGTTTTCA	NA	False	NA	-3	True	TATAAA	-18	NA	3359928	3297428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
Isoform_29456_473	chr12	-	3504	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-39	48	-39	-48	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATGGTCTACTTCTG	NA	False	NA	-50	True	AATAAA	-10	NA	3360008	3297475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
Isoform_2946_104	chr10	-	1628	6	FSM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	21	5	-3	0	multi-exon	FALSE	canonical	3	49	junction_5	6.89927532426414	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	False	NA	-5	True	TATAAA	-17	NA	79369609	79362268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
Isoform_2947_6	chr10	-	1586	6	FSM	ENSMUSG00000052151.13	ENSMUST00000163602.9	1609	6	16	7	-4	-2	multi-exon	FALSE	canonical	3	7	junction_5	21.5462293684997	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCATGCATGTTGAT	NA	False	NA	-7	True	TATAAA	-15	NA	79369610	79362270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369498
Isoform_29485_5	chr12	-	3360	3	FSM	ENSMUSG00000112308.2_ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	-9	-1428	-2	-4	multi-exon	FALSE	canonical	3	62	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGGCCTGGGTTTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	3476749	3453881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_3456712_3457643_3457925_3476500
Isoform_29486_30	chr12	-	3144	3	FSM	ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	16	-1237	-10	-195	multi-exon	FALSE	canonical	3	62	junction_1	5.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATTAACTTTTTAAAA	NA	False	NA	NA	False	AATAAA	-7	NA	3476724	3454072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_3456712_3457643_3457925_3476500
Isoform_29489_8	chr12	-	3129	3	FSM	ENSMUSG00000071456.7	ENSMUST00000168012.3	3569	3	248	192	-16	-192	multi-exon	FALSE	canonical	3	14	junction_1	29.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAACTTTTTAAAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	3476763	3454069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_3456712_3457700_3457925_3476500
Isoform_29491_6	chr12	-	6534	23	FSM	ENSMUSG00000020658.11	ENSMUST00000111178.2	6547	23	11	2	11	-1	multi-exon	FALSE	canonical	1	2	junction_15	2.26224857056896	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGTCTATTTGAATT	NA	False	NA	-1	True	AATAAA	-18	NA	4088904	4012555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4016548_4017102_4017153_4018526_4018634_4019564_4019614_4020975_4021068_4021765_4021894_4023607_4023676_4025335_4025468_4026714_4026877_4027118_4027195_4027912_4028086_4030141_4030194_4030450_4030563_4031653_4031816_4031969_4032106_4032854_4032934_4033383_4033519_4034533_4034684_4035429_4035552_4042905_4043057_4049589_4049718_4050879_4050957_4088703
Isoform_29492_77	chr12	-	2173	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	361	1814	5	1	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATTCTTTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	4283933	4263480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
Isoform_29493_11	chr12	-	2499	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	35	1814	35	1	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATTCTTTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	4284259	4263480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
Isoform_29494_3	chr12	-	2335	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	320	1693	-9	122	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATATTTTTCTTTCAGA	NA	False	NA	NA	False	TATAAA	-15	NA	4283974	4263359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
Isoform_29496_50	chr12	-	2174	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	14.9666295470958	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCAGATTCTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	4283965	4263481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
Isoform_29497_12	chr12	-	2463	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	14.9666295470958	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATTCTTTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	4284253	4263480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
Isoform_29498_5	chr12	-	2244	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	28.5623100528573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGATTCTTTGTTAA	NA	False	NA	-6	True	AATAAA	-22	NA	4283932	4263478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281445_4281683_4283530_4283658_4283751
Isoform_29499_11	chr12	-	2245	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	27.9026084005699	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATTCTTTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	4283965	4263480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281445_4281683_4283530_4283658_4283781
Isoform_2950_9	chr10	-	2566	14	FSM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	-4	0	-4	0	multi-exon	FALSE	canonical	3	15	junction_10	62.0923153160017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390929	79376078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390907
Isoform_29501_19	chr12	-	5249	23	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	13	15	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	21.3102330596794	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCACTTTTGTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	4527169	4299425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
Isoform_29502_3	chr12	-	7356	23	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	21.3102330596794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGCTGCCTCTTCATTTA	NA	False	NA	-1	True	AATAGA	-18	NA	4527213	4297362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
Isoform_29503_3	chr12	-	7308	23	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	21.3102330596794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4527164	4297361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
Isoform_29506_5	chr12	-	7356	23	FSM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	-27	0	-27	0	multi-exon	FALSE	canonical	3	76	junction_22	13.9950552070342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4527209	4297361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
Isoform_29508_7	chr12	-	7316	23	FSM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	13	0	13	0	multi-exon	FALSE	canonical	3	76	junction_22	13.9950552070342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4527169	4297361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
Isoform_29511_18	chr12	-	5235	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-23	17	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.557951268816	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527205	4299423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
Isoform_29512_6	chr12	-	478	3	FSM	ENSMUSG00000112819.2	ENSMUST00000217932.2	457	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	11	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	4603806	4602545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4602746_4603013_4603176_4603690
Isoform_29513_15	chr12	-	317	2	NIC	ENSMUSG00000112819.2	novel	457	3	NA	NA	-21	1	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	4603806	4602544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_4602746_4603690
Isoform_29514_29	chr12	-	976	4	FSM	ENSMUSG00000020635.9	ENSMUST00000020964.7	976	4	-3	3	-3	-3	multi-exon	FALSE	canonical	3	44	junction_1	6.34209919681348	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTGTTGTGGGAGGTT	NA	False	NA	-3	True	AATAAA	-26	NA	4891594	4883176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4883796_4884738_4884852_4888168_4888217_4891398
Isoform_29515_4	chr12	-	3121	14	FSM	ENSMUSG00000037336.15	ENSMUST00000045921.14	2490	14	4	-635	1	3	multi-exon	FALSE	canonical	1	1	junction_1	2.01473859287828	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAGGTATGTT	NA	False	NA	NA	False	NA	NA	NA	4924354	4912436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4914080_4915136_4915314_4915727_4915872_4916158_4916269_4916448_4916530_4916789_4916874_4917337_4917460_4917611_4917703_4918912_4919044_4919131_4919211_4919534_4919659_4920498_4920624_4921375_4921502_4924270
Isoform_29519_161	chr12	-	2170	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	205	321	-61	-4	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	4957500	4929352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_2952_50	chr10	-	2893	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	38	junction_13	53.1463314291654	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390722	79376078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
Isoform_29524_99	chr12	-	2490	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	207	-1	-59	1	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTGGTTGTACATGC	NA	False	NA	-5	True	GATAAA	-14	NA	4957498	4929030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_29525_85	chr12	-	4406	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	207	-1917	-59	1917	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATCTGTTTAGTGATTC	NA	False	NA	-4	True	GATAAA	-15	NA	4957498	4927114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_29526_260	chr12	-	1360	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	207	1129	-59	229	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTATTGCCCGTGCTTCA	NA	False	NA	-30	True	ATTAAA	-11	NA	4957498	4930160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_29527_54	chr12	-	1544	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	158	994	-108	364	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAATACTAATCTATATA	NA	False	NA	-33	True	AATAAA	-20	NA	4957547	4930025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_2953_6	chr10	-	2712	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	15	junction_13	58.4279255596765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390907	79376079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390744
Isoform_2954_165	chr10	-	2571	14	FSM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	104	1	-4	0	multi-exon	FALSE	canonical	3	111	junction_13	38.1023225308973	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390929	79376079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
Isoform_29540_52	chr12	-	4707	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	207	-2218	-59	2218	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTAAGACGTGGCTT	NA	False	NA	-18	True	AGTAAA	-21	NA	4957498	4926813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_29548_17	chr12	-	2671	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	27	-2	27	2	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGTTGTACATGCC	NA	False	NA	-4	True	GATAAA	-15	NA	4957678	4929029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_2956_32	chr10	-	2769	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	9	junction_12	62.3803944318041	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390953	79376079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390907
Isoform_29565_26	chr12	-	2536	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	186	3025	-80	-1667	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTAAGAAAATATTCT	NA	False	NA	NA	False	NA	NA	NA	4957519	4932056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_29566_52	chr12	-	1039	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	207	4501	-59	-3143	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTCAATGCAACATAAC	NA	False	NA	NA	False	AATAAA	-17	NA	4957498	4933532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_29573_131	chr12	-	2365	3	FSM	ENSMUSG00000043673.12	ENSMUST00000055673.2	2933	3	31	537	31	1	multi-exon	FALSE	canonical	3	56	junction_1	7	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTTGTTTCTATGTT	4038	False	NA	-1	True	AATAAA	-19	NA	11200343	11140739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_11142757_11169759_11169950_11200185
Isoform_29576_13	chr12	-	2345	3	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	720	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	27	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCCTTGTTTCTATG	4727	False	NA	-3	True	AATAAA	-17	NA	11199654	11140741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_11142757_11169759_11169950_11199514
Isoform_29577_6	chr12	-	2477	4	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.7207222984806	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTTGTTTCTATGTT	4026	False	NA	-1	True	AATAAA	-19	NA	11200355	11140739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_11142757_11169759_11169950_11178388_11178489_11200185
Isoform_29579_47	chr12	-	3295	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-40	2013	-5	637	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTCTTGAAATGTCTT	NA	False	NA	NA	False	AATATA	-15	NA	11315807	11290933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
Isoform_2958_10	chr10	-	3362	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	38	junction_12	52.1999361430005	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390721	79376078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
Isoform_29581_3	chr12	-	3570	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-36	1734	-1	-913	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTTGTATGTCTAAAGC	NA	False	NA	NA	False	AGTAAA	-16	NA	11315803	11290654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
Isoform_29582_3	chr12	-	5302	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-40	6	-5	-6	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATGATTTTAATCCTT	NA	False	NA	-2	True	NA	NA	NA	11315807	11288926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
Isoform_29584_6	chr12	-	2188	13	ISM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-8	3701	-8	-1051	5prime_fragment	FALSE	canonical	3	36	junction_1	6.1913918736689	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGGAAAGACATTTG	NA	False	NA	NA	False	NA	NA	NA	11315775	11292621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
Isoform_29585_3	chr12	-	1668	12	ISM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-20	7188	2	1633	5prime_fragment	FALSE	canonical	3	39	junction_9	5.8124972229621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTTTTACTTTTAATAT	NA	False	NA	NA	False	AATAAA	-15	NA	11315787	11296108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
Isoform_29586_3	chr12	-	1714	11	ISM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-49	9035	-14	-214	5prime_fragment	FALSE	canonical	3	39	junction_8	5.88302643203309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	11315816	11297955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
Isoform_2959_37	chr10	-	3042	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	111	junction_12	34.2502027569019	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390929	79376078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
Isoform_2960_5	chr10	-	3217	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	9	junction_11	63.1929914362872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390930	79376078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390907
Isoform_29602_3148	chr12	-	2591	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	80	3	-9	0	multi-exon	FALSE	canonical	3	794	junction_2	66.5	3148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCGATGTTTTCCTTCC	NA	False	NA	-21	True	AATAAA	-17	NA	12991835	12986096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_12987612_12989610_12990488_12991636
Isoform_2962_13	chr10	-	2158	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	10	-1	intron_retention	FALSE	canonical	3	14	junction_1	63.0349880798134	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	-5	True	ATTAAA	-14	NA	79390938	79376080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79377034_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
Isoform_29627_3834	chr12	-	2496	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	12	2334	12	-2334	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	3834	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	False	NA	-11	True	AATAAA	-14	NA	13299202	13269307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
Isoform_29643_3	chr12	-	4088	4	NIC	ENSMUSG00000020601.9	novel	4198	3	NA	NA	20	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGGCCTCAAAAATGA	NA	False	NA	NA	False	AATAAA	-22	NA	15866858	15841725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_15844078_15859696_15859990_15865231_15866600_15866783
Isoform_29648_23	chr12	-	5440	22	NIC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	30	junction_21	35.2563659197666	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGAACTTTAAATTATT	7247	False	NA	-17	True	AATAAA	-32	NA	16639766	16585949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
Isoform_29649_63	chr12	-	5288	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	5	288	1	-3	multi-exon	FALSE	canonical	3	67	junction_16	22.2780160696593	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGGCATATGAACTTT	7247	False	NA	-25	True	AATAAA	-24	NA	16639766	16585957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
Isoform_29655_13	chr12	-	5336	21	FSM	ENSMUSG00000020593.17	ENSMUST00000222989.2	4103	21	1	-1234	1	0	multi-exon	FALSE	canonical	3	30	junction_20	37.3187620373452	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7247	False	NA	-22	True	AATAAA	-27	NA	16639766	16585954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
Isoform_29658_45	chr12	-	5189	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	8	-1083	1	-3	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGGCATATGAACTTT	7247	False	NA	-25	True	AATAAA	-24	NA	16639766	16585957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
Isoform_2966_40	chr10	-	3934	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	31	-722	31	121	multi-exon	FALSE	canonical	3	15	junction_3	3.42681419915868	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTAAAGCCTAC	NA	False	NA	NA	False	NA	NA	NA	79473721	79453763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
Isoform_29661_198	chr12	-	1863	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	58	7	7	-7	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGAATTCTTAAGCTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	17050061	17038655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
Isoform_29663_17	chr12	-	1918	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	6	4	4	-4	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTCTTAAGCTGTCATG	NA	False	NA	-3	True	AATAAA	-22	NA	17050113	17038652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
Isoform_29664_14	chr12	-	1750	6	FSM	ENSMUSG00000045679.15	ENSMUST00000222203.2	1706	6	3	-47	3	-3	multi-exon	FALSE	canonical	3	14	junction_2	66.9943281181325	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTAAGCTGTCATGA	NA	False	NA	-2	True	AATAAA	-23	NA	17050065	17038651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_17039897_17042278_17042321_17045614_17045673_17047634_17047705_17047774_17047858_17049813
Isoform_29665_42	chr12	-	1432	13	FSM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	0	-7	0	3	multi-exon	FALSE	canonical	3	13	junction_8	6.04841577054135	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTTCTAATGTTA	NA	False	NA	5	True	AATAAA	-19	NA	17374731	17334718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
Isoform_29668_3	chr12	-	1067	2	FSM	ENSMUSG00000085642.9	ENSMUST00000143905.2	881	2	-209	23	0	-23	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAACAA	NA	False	NA	NA	False	TATAAA	-21	NA	20971263	20926450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_20927097_20970842
Isoform_29669_3	chr12	-	1097	6	FSM	ENSMUSG00000069755.6	ENSMUST00000208744.2	928	6	0	-169	0	169	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTATGAGTGTAATCA	NA	False	NA	NA	False	NA	NA	NA	20971263	20950574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_20950936_20952270_20952332_20952533_20952661_20964759_20964843_20965748_20965793_20970842
Isoform_29670_3	chr12	-	1861	6	FSM	ENSMUSG00000069755.6	ENSMUST00000208744.2	928	6	-10	-923	-10	923	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTCTTGTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	20971273	20949820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_20950936_20952270_20952332_20952533_20952661_20964759_20964843_20965748_20965793_20970842
Isoform_29671_8	chr12	-	3373	4	NIC	ENSMUSG00000069755.6	novel	928	6	NA	NA	-1	402	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	1.69967317119759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	20971264	20948172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_20950936_20952270_20952332_20952533_20952661_20970842
Isoform_29672_25	chr12	-	1135	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	-55	621	33	-10	multi-exon	FALSE	canonical	3	43	junction_6	78.2148039411693	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTTTCTGGACAAAAGA	NA	False	NA	-21	True	AATAAA	-4	NA	21336153	21320714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
Isoform_29675_115	chr12	-	963	7	FSM	ENSMUSG00000062352.16	ENSMUST00000076260.12	1921	7	50	908	-15	-10	multi-exon	FALSE	canonical	3	216	junction_3	20.4728817924807	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTTTCTGGACAAAAGA	NA	False	NA	-21	True	AATAAA	-4	NA	21336235	21320714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
Isoform_29678_135	chr12	-	4068	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	77	298	-16	-4	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAATTGTCTTAATT	NA	False	NA	-11	True	TATAAA	-14	NA	21423556	21373815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
Isoform_29679_22	chr12	-	4158	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	-12	297	-12	-3	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAATTGTCTTAATTG	NA	False	NA	-10	True	TATAAA	-15	NA	21423645	21373814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
Isoform_29680_93	chr12	-	4198	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	77	168	-16	126	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTGGATTGCGTATAT	NA	False	NA	NA	False	AATAAA	-13	NA	21423556	21373685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
Isoform_29682_13	chr12	-	4367	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	62	14	23	-14	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGGCTACCAACATG	NA	False	NA	NA	False	AATAAA	-22	NA	21423571	21373531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
Isoform_29683_11	chr12	-	4254	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	20	169	-19	125	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTGGATTGCGTATA	NA	False	NA	NA	False	AATAAA	-12	NA	21423613	21373686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
Isoform_29685_4	chr12	-	4452	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	-25	16	-25	-16	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTGTGGCTACCAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21423658	21373533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
Isoform_29709_79	chr12	-	1617	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	146	347	146	-344	multi-exon	FALSE	canonical	3	3292	junction_3	152.582764426393	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467291	21440676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
Isoform_29722_4108	chr12	-	1487	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	105	605	56	-344	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	4108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467533	21440676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_29723_1906	chr12	-	1828	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	105	264	56	-3	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	1906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTTATTATGGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	21467533	21440335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_29724_150	chr12	-	1898	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	41	258	-8	0	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21467597	21440329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_29725_363	chr12	-	2090	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	105	2	56	-2	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTTGGCTGGTATTAGA	NA	False	NA	-14	True	AATAAA	-16	NA	21467533	21440073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_29727_251	chr12	-	1552	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	40	605	-9	-344	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467598	21440676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_2973_274	chr10	-	3745	21	FSM	ENSMUSG00000020329.13	ENSMUST00000020580.13	3755	21	7	3	-1	-3	multi-exon	TRUE	canonical	3	126	junction_16	17.3118456555042	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATGAGACGCTGCGCT	4716	False	NA	-10	True	NA	NA	NA	79582406	79571966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
Isoform_29741_24	chr12	-	1169	4	ISM	ENSMUSG00000073164.12	ENSMUST00000149246.8	3370	5	38	5677	-3	1	5prime_fragment	FALSE	canonical	0	0	junction_2	1.69967317119759	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCAGCTGAGCTCATCC	NA	False	NA	-6	True	NA	NA	NA	23060247	23009676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_23010256_23042788_23042850_23043051_23043179_23059845
Isoform_29743_18	chr12	-	874	4	NNC	ENSMUSG00000073164.12	novel	3370	5	NA	NA	8575	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.56846672960488	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCAGCTGAGCTCATCC	NA	False	NA	-6	True	NA	NA	NA	23051424	23009676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_23010256_23042788_23042850_23043051_23043179_23051317
Isoform_29745_5	chr12	-	1136	3	FSM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	-2	136	-2	-136	multi-exon	FALSE	canonical	2	5	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGATTGCTTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	25146093	25143935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_25144576_25145309_25145374_25145661
Isoform_29751_23	chr12	-	5036	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-73	-151	-35	-89	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTTATGTAGTCTGT	8799	False	NA	0	True	AATACA	-14	NA	26465288	26356881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
Isoform_29754_12	chr12	-	5092	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-46	-234	-8	-6	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGCCTGGCTCCATC	8826	False	NA	-7	True	AATACA	-15	NA	26465261	26356798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
Isoform_29755_3	chr12	-	3408	2	ISM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-53	79303	-15	2982	5prime_fragment	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAAAAGGA	8819	False	NA	NA	False	AAAAAG	-16	NA	26465268	26436335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_26439575_26465099
Isoform_29764_9813	chr12	-	653	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	72	229	-3	0	multi-exon	TRUE	canonical	3	10789	junction_4	2567.89392736971	9813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
Isoform_29765_667	chr12	-	704	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	21	229	21	0	multi-exon	FALSE	canonical	3	10789	junction_4	2567.89392736971	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685931	28681081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
Isoform_29778_164	chr12	-	2936	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	53	388	-18	-388	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACAGTTCATTGTC	8302	False	NA	-9	True	NA	NA	NA	28800399	28741015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
Isoform_29779_96	chr12	-	3325	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	53	-1	-18	0	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8302	False	NA	-29	True	AATAAA	-20	NA	28800399	28740626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
Isoform_29781_20	chr12	-	3001	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	-12	388	1	-388	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACAGTTCATTGTC	8237	False	NA	-9	True	NA	NA	NA	28800464	28741015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
Isoform_29782_8	chr12	-	3390	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	-12	-1	1	0	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8237	False	NA	-29	True	AATAAA	-20	NA	28800464	28740626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
Isoform_29784_69	chr12	-	3158	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	72	0	-18	0	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8302	False	NA	-29	True	AATAAA	-20	NA	28800399	28740626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
Isoform_29785_46	chr12	-	2841	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	3	386	-3	-385	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTTCATTGTCTTC	8233	False	NA	-6	True	NA	NA	NA	28800468	28741012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
Isoform_29786_31	chr12	-	3223	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	7	0	1	0	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8237	False	NA	-29	True	AATAAA	-20	NA	28800464	28740626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
Isoform_29787_86	chr12	-	2769	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	72	389	-18	-388	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACAGTTCATTGTC	8302	False	NA	-9	True	NA	NA	NA	28800399	28741015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
Isoform_29790_28	chr12	-	2299	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	18	437	0	-437	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGGTGCTTCTTGGTTT	NA	False	NA	-8	True	ATTAAA	-14	NA	30961570	30944091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
Isoform_29791_472	chr12	-	1423	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	18	1313	0	907	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCAGTGTCTGCCTGCTT	NA	False	NA	NA	False	AATACA	-12	NA	30961570	30944967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
Isoform_29808_42	chr12	-	2298	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	0	768	0	-438	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGGGTGCTTCTTGGTT	NA	False	NA	-9	True	ATTAAA	-13	NA	30961570	30944092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
Isoform_29811_730	chr12	-	1423	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	0	1643	0	907	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCAGTGTCTGCCTGCTT	NA	False	NA	NA	False	AATACA	-12	NA	30961570	30944967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
Isoform_2982_1204	chr10	-	1573	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	32	34	-10	-7	multi-exon	FALSE	canonical	3	909	junction_4	92.4302946819927	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGAGCCCATGGCT	NA	False	NA	-14	True	AATACA	-9	NA	79602754	79594382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
Isoform_29822_996	chr12	-	2221	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	37	286	-2	-286	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	996	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTGGTTATTCTGAGT	NA	False	NA	-11	True	AATAAA	-17	NA	31401415	31381561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
Isoform_2983_89	chr10	-	1662	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	-47	24	-47	3	multi-exon	FALSE	canonical	3	909	junction_4	92.4302946819927	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCATGGCTTGGCGTCTTC	NA	False	NA	-4	True	AATACA	-19	NA	79602833	79594372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
Isoform_29833_20	chr12	-	3833	6	FSM	ENSMUSG00000020659.17	ENSMUST00000185739.8	3945	6	4	108	2	-1	multi-exon	FALSE	canonical	3	17	junction_4	67.8250691116493	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCCTAGATGAGTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	31549552	31534935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542176_31544580_31544749_31549521
Isoform_29834_11	chr12	-	3825	6	NIC	ENSMUSG00000020659.17	novel	1399	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	17	junction_4	67.8250691116493	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	31549552	31534934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542176_31544589_31544749_31549521
Isoform_29836_148	chr12	-	3836	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	63	1	2	-1	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCCTAGATGAGTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	31549552	31534935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
Isoform_2984_26	chr10	-	1686	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	-73	26	-73	1	multi-exon	FALSE	canonical	3	909	junction_4	92.4302946819927	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCATGGCTTGGCGTCT	NA	False	NA	-6	True	AATACA	-17	NA	79602859	79594374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
Isoform_29840_5	chr12	-	3949	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	63	-112	2	5	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTCGTGTATTTCTTT	NA	False	NA	NA	False	AGTAAA	-36	NA	31549552	31534822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
Isoform_29842_3	chr12	-	3796	5	ISM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	4805	109	4805	-2	3prime_fragment	FALSE	canonical	3	23	junction_4	73.0389450909582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCCTAGATGAGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	31544749	31534936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589
Isoform_29843_9	chr12	-	1863	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	1	2073	1	-1	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGCTATTTTTATGT	NA	False	NA	-21	True	ATTAAA	-15	NA	31549553	31536900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
Isoform_29846_13	chr12	-	1962	7	FSM	ENSMUSG00000020650.16	ENSMUST00000020979.9	1949	7	-12	-1	-12	1	multi-exon	FALSE	canonical	3	313	junction_3	46.7618077780005	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATTGGAGTTTTT	NA	False	NA	NA	False	TATAAA	-11	NA	31684610	31645358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261
Isoform_29848_288	chr12	-	1782	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-20	4393	3	1	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATTGGAGTTTTT	NA	False	NA	NA	False	TATAAA	-11	NA	31684654	31645358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
Isoform_29851_6	chr12	-	952	6	ISM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-21	25820	2	17288	5prime_fragment	FALSE	canonical	3	313	junction_1	47.6931860961291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCAGTCACATTTTCTT	NA	False	NA	NA	False	TATAAA	-13	NA	31684655	31666785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
Isoform_29853_146	chr12	-	1751	7	FSM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	21	1	1	-1	multi-exon	FALSE	canonical	2	86	junction_6	14.7016627933336	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTATGACTCGCCTGT	9081	False	NA	-6	True	AATAAA	-16	NA	31704804	31690049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
Isoform_29854_3	chr12	-	1637	6	NIC	ENSMUSG00000020648.4	novel	1773	7	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_3	43.5917423372822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTATGACTCGCCTGT	9077	False	NA	-6	True	AATAAA	-16	NA	31704808	31690049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_31690944_31691500_31691728_31692762_31692886_31698764_31698887_31702289_31702441_31704688
Isoform_29856_18	chr12	-	2725	11	NIC	ENSMUSG00000002996.18	novel	3142	11	NA	NA	1	-193	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	68.426310729134	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGTTGACTGAATTCA	NA	False	NA	1	True	AATAAA	-25	NA	32000219	31976445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000103
Isoform_29862_10	chr12	-	2701	9	FSM	ENSMUSG00000002996.18	ENSMUST00000167458.9	2733	9	5	27	3	-27	multi-exon	FALSE	canonical	3	134	junction_8	33.3164280048147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGATGTGTTGGACT	NA	False	NA	NA	False	AATAAA	-15	NA	32000217	31979408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
Isoform_29864_18	chr12	-	3388	11	FSM	ENSMUSG00000002997.16	ENSMUST00000036497.16	3378	11	-12	2	-12	-2	multi-exon	FALSE	canonical	2	12	junction_4	4.56508488420533	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTCCAAGCATGGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	32111307	32008476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
Isoform_29866_19	chr12	-	5186	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	-16	378	-16	-378	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTTGTCTGTATTGC	NA	False	NA	NA	False	AATAAA	-17	NA	35585053	35548350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
Isoform_29867_55	chr12	-	5517	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	27	4	27	-4	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAGTGTTTTCATGCAA	NA	False	NA	NA	False	AATAAA	-15	NA	35585010	35547976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
Isoform_29869_5	chr12	-	736	2	ISM	ENSMUSG00000019256.18	ENSMUST00000110811.3	1155	9	-405	21740	10	-12194	5prime_fragment	FALSE	canonical	3	52	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	ACTAAA	-36	NA	35585027	35576598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_35576868_35584560
Isoform_29870_834	chr12	-	1953	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-21	0	-10	0	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	834	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGGGTGTTTAAATCAA	NA	False	NA	-4	True	AATAAA	-20	NA	36092509	36064555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
Isoform_29887_1666	chr12	-	1845	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	16	10	16	-10	multi-exon	FALSE	canonical	3	931	junction_9	81.950499068161	1666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTTGTGTATATGGT	NA	False	NA	-21	True	AATAAA	-11	NA	36206808	36141843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
Isoform_2989_88	chr10	-	1638	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-11	-8	intron_retention	FALSE	canonical	3	909	junction_5	92.3283846509019	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602755	79594383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
Isoform_29901_28	chr12	-	1125	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	53	2532	0	-1	multi-exon	FALSE	canonical	3	67	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCTAGTGTTTTGTGC	NA	False	NA	-8	True	AATAAA	-14	NA	40087375	40085821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40086833_40087261
Isoform_29902_3	chr12	-	3717	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	-7	0	-7	0	multi-exon	FALSE	canonical	3	67	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGTTAGACTATCAT	NA	False	NA	0	True	AATAAA	-16	NA	40087435	40083289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40086833_40087261
Isoform_29904_97	chr12	-	1161	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	39	0	39	0	multi-exon	FALSE	canonical	3	220	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTAGTGTTTTGTGCT	NA	False	NA	-7	True	AATAAA	-15	NA	40087985	40085820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40086833_40087836
Isoform_29907_29	chr12	-	3708	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	22	-2530	22	-1	multi-exon	FALSE	canonical	3	220	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGCGTTAGACTATCA	NA	False	NA	-1	True	AATAAA	-15	NA	40088002	40083290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40086833_40087836
Isoform_29908_40	chr12	-	3677	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	53	-2530	53	-1	multi-exon	FALSE	canonical	3	220	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGCGTTAGACTATCA	NA	False	NA	-1	True	AATAAA	-15	NA	40087971	40083290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40086833_40087836
Isoform_29913_45	chr12	-	1833	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	-17	1562	-17	2	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTAGTGAGCAGATG	NA	False	NA	-1	True	AATAAA	-23	NA	40273205	40253127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
Isoform_29914_942	chr12	-	1811	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	5	1562	1	2	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTAGTGAGCAGATG	NA	False	NA	-1	True	AATAAA	-23	NA	40273183	40253127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
Isoform_29927_10	chr12	-	1935	13	FSM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	5	498	5	-498	multi-exon	FALSE	canonical	2	4	junction_11	159.233493824495	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTCATTATCTTGGA	NA	False	NA	NA	False	AATAAA	-30	NA	40495768	40365542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40460574_40460953_40495664
Isoform_29928_14	chr12	-	2080	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	109	-1	-19	1	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCATTTTTACTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	40495792	40365043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
Isoform_29929_544	chr12	-	1545	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	130	513	2	-513	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGGACTGAAGAAACTT	NA	False	NA	NA	False	AATAAA	-15	NA	40495771	40365557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
Isoform_29933_13	chr12	-	3398	11	NIC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	-6	-499	intron_retention	FALSE	canonical	3	359	junction_5	47.5736271478221	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGTCATTATCTTGG	NA	False	NA	NA	False	AATAAA	-29	NA	40495779	40365543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
Isoform_29937_50	chr12	-	1865	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	260	336	2	-336	multi-exon	FALSE	canonical	3	92	junction_1	7	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTGTTGTCATTTTA	NA	False	NA	NA	False	TATAAA	-15	NA	44256849	44252677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_44254189_44254869_44255097_44256722
Isoform_29938_14	chr12	-	2202	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	260	-1	2	1	multi-exon	FALSE	canonical	3	92	junction_1	7	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGCTTGGAATGATT	NA	False	NA	NA	False	AATAAA	-17	NA	44256849	44252340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_44254189_44254869_44255097_44256722
Isoform_29939_4	chr12	-	2286	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	175	0	-83	0	multi-exon	FALSE	canonical	3	92	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACGTGCTTGGAATGAT	NA	False	NA	NA	False	AATAAA	-16	NA	44256934	44252341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_44254189_44254869_44255097_44256722
Isoform_29943_5	chr12	-	4138	7	NNC	ENSMUSG00000046314.17	novel	4553	6	NA	NA	-19	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.43932593411478	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTTTCTCTCCTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	45121120	44899267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_44902475_44902516_44902661_44908007_44908166_44948656_44948823_44949642_44949774_45066249_45066439_45120977
Isoform_29944_3	chr12	-	4263	7	NNC	ENSMUSG00000046314.17	novel	4553	6	NA	NA	-146	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.43932593411478	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTTGTTTCTCTCCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	45121247	44899269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_44902463_44902504_44902661_44908007_44908166_44948656_44948823_44949642_44949774_45066249_45066439_45120977
Isoform_29945_9	chr12	-	4222	5	FSM	ENSMUSG00000021047.8	ENSMUST00000021438.8	7154	5	-446	3378	-446	3180	multi-exon	FALSE	canonical	3	11	junction_1	3.56195171219375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCCCGTCTCATTTT	NA	False	NA	1	True	TATAAA	-27	NA	46866158	46744677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_46747757_46760280_46760353_46767472_46767640_46863668_46863813_46865398
Isoform_29947_7	chr12	-	3819	19	FSM	ENSMUSG00000002688.9	ENSMUST00000002765.9	3653	19	-169	3	-169	-3	multi-exon	FALSE	canonical	0	0	junction_18	5.99897110519693	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGGTGTCATACTAAT	NA	False	NA	-7	True	AATAAA	-11	NA	50696050	50388016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50466635_50466660_50472221_50472383_50474885_50475018_50536685_50536825_50695498
Isoform_29948_17	chr12	-	3790	18	NIC	ENSMUSG00000002688.9	novel	3653	19	NA	NA	-164	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	4.97606729001332	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGGTGTCATACTAAT	NA	False	NA	-7	True	AATAAA	-11	NA	50696045	50388016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50472221_50472383_50474885_50475018_50536685_50536825_50695498
Isoform_29949_25	chr12	-	3044	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	-10	12	0	1	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	TTTAAA	-15	NA	51738680	51656426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_2995_45	chr10	-	1499	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-6	-7	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	357.615915273835	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGAGCCCATGGCT	NA	False	NA	-14	True	AATACA	-9	NA	79602750	79594382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
Isoform_29951_16	chr12	-	4227	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	-170	-1011	-160	1011	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738840	51655403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_29952_19	chr12	-	3899	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	-8	-845	2	845	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTTTTCTGATCAGT	NA	False	NA	-6	True	AATAAA	-20	NA	51738678	51655569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_29961_16	chr12	-	3939	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-12	1012	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	-2	True	AATAAA	-20	NA	51738692	51655402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_29962_8	chr12	-	4050	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-123	1012	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	-2	True	AATAAA	-20	NA	51738803	51655402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_29966_8	chr12	-	2927	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-135	-1	-135	1	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	TTTAAA	-15	NA	51738815	51656426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_29970_142	chr12	-	3814	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	2	-1025	2	1012	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	-2	True	AATAAA	-20	NA	51738678	51655402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_29971_35	chr12	-	3918	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-101	-1026	-101	1013	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTCTTGGCCACATTA	NA	False	NA	-1	True	AATAAA	-21	NA	51738781	51655401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_29974_7	chr12	-	3963	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-148	-1024	-148	1011	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738828	51655403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_29990_8	chr12	-	8984	43	FSM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	5	-1	5	1	multi-exon	FALSE	canonical	3	48	junction_19	32.7528018915334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGTGTCGTGTTACT	NA	False	NA	-4	True	ATTAAA	-15	NA	51876314	51790503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
Isoform_29991_8	chr12	-	9035	43	FSM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	-46	-1	-46	1	multi-exon	FALSE	canonical	3	48	junction_19	32.7528018915334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGTGTCGTGTTACT	NA	False	NA	-4	True	ATTAAA	-15	NA	51876365	51790503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
Isoform_29995_8	chr12	-	8658	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-27	2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_19	32.5636390713501	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTCGTGTTACTG	NA	False	NA	-3	True	ATTAAA	-16	NA	51876128	51790502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
Isoform_29996_3	chr12	-	8833	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_19	32.5636390713501	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGTGTCGTGTTACT	NA	False	NA	-4	True	ATTAAA	-15	NA	51876304	51790503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
Isoform_29999_5	chr12	-	8916	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	34.7562617728993	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCTGTGTCGTGTTAC	NA	False	NA	-5	True	ATTAAA	-14	NA	51876394	51790504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810809_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
Isoform_30010_16	chr12	-	7741	36	FSM	ENSMUSG00000035181.7	ENSMUST00000040583.7	7763	36	20	2	-4	-2	multi-exon	FALSE	canonical	1	15	junction_35	10.655036176305	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTGTATTTTGAAG	NA	False	NA	-2	True	AATAAA	-14	NA	52018084	51922655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
Isoform_30011_14	chr12	-	7818	36	FSM	ENSMUSG00000035181.7	ENSMUST00000040583.7	7763	36	-57	2	-57	-2	multi-exon	FALSE	canonical	1	15	junction_35	10.655036176305	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTGTATTTTGAAG	9942	False	NA	-2	True	AATAAA	-14	NA	52018161	51922655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
Isoform_30014_3	chr12	-	1957	3	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-39	-17573	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTTTTTTTTAAAGAAA	9960	False	NA	NA	False	NA	NA	NA	52018143	52006608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_52007474_52007493_52008428_52017985
Isoform_30015_4	chr12	-	2565	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	-1	0	1	multi-exon	FALSE	canonical	3	170	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTACAGCACTCTATGC	NA	False	NA	NA	False	AATAAA	-22	NA	52053284	52044288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_52046657_52051661_52051732_52053157
Isoform_30018_254	chr12	-	1167	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1397	0	-1397	multi-exon	FALSE	canonical	3	170	junction_1	5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCCAGTTTTTCTTAA	NA	False	NA	-1	True	AATAAA	-16	NA	52053284	52045686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_52046657_52051661_52051732_52053157
Isoform_30020_4	chr12	-	1245	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1319	0	-1319	multi-exon	FALSE	canonical	3	170	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGACTTTGTGCTCGG	NA	False	NA	77	True	AAAAAG	-22	NA	52053284	52045608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_52046657_52051661_52051732_52053157
Isoform_30022_43	chr12	-	1375	3	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	0	-1399	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	74	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAACTCCAGTTTTTCTT	NA	False	NA	-3	True	AATAAA	-14	NA	52053284	52045688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_52046657_52051661_52051732_52052947
Isoform_30024_6	chr12	-	1588	3	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	-2	-1400	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	83.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAAACTCCAGTTTTTCT	NA	False	NA	-4	True	AATAAA	-13	NA	52053286	52045689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_52046657_52051661_52051732_52052735
Isoform_30026_44	chr12	-	1997	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	-11	676	-11	-676	multi-exon	FALSE	canonical	3	55	junction_3	5.24404424085076	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTCTTCCACATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	54250657	54226442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
Isoform_30029_5	chr12	-	2607	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	55	0	55	0	multi-exon	FALSE	canonical	3	55	junction_3	5.24404424085076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTGGTTCATTTCCAT	NA	False	NA	NA	False	NA	NA	NA	54250591	54225766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
Isoform_30033_222	chr12	-	1269	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	65	12	-12	-3	multi-exon	FALSE	canonical	3	293	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATGTAGCAGTCTC	NA	False	NA	NA	False	ATTAAA	-5	NA	54703293	54692188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54693321_54703156
Isoform_30034_52	chr12	-	1355	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	-13	4	-13	-4	multi-exon	FALSE	canonical	3	293	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCAGTCTCTTTTATGG	NA	False	NA	NA	False	ATTAAA	-13	NA	54703371	54692180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54693321_54703156
Isoform_30038_46	chr12	-	2264	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	19	1903	0	-588	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATGCAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	54742647	54719027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
Isoform_30039_290	chr12	-	1039	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	20	3127	1	-1	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGGAGTGGTTATCAA	NA	False	NA	-6	True	ATTAAA	-18	NA	54742646	54720251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
Isoform_30042_4	chr12	-	941	5	NIC	ENSMUSG00000054302.16	novel	4186	6	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	175.623709959675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGGAGTGGTTATCAA	NA	False	NA	-6	True	ATTAAA	-18	NA	54742660	54720251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_54720636_54725294_54725409_54738784_54738881_54739559_54739742_54742495
Isoform_30051_976	chr12	-	1896	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	37	-5	-2	5	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGTCTTTTCTTTATC	NA	False	NA	-5	True	AATAAA	-25	NA	54842451	54793128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
Isoform_30052_50	chr12	-	1936	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	-5	-3	-5	3	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAAGGTCTTTTCTTTA	NA	False	NA	-7	True	AATAAA	-23	NA	54842493	54793130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
Isoform_30053_180	chr12	-	2816	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	37	-925	-2	925	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTGAAGGTGTGTAA	NA	False	NA	-2	True	NA	NA	NA	54842451	54792208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
Isoform_3006_115	chr10	-	3034	15	FSM	ENSMUSG00000013833.16	ENSMUST00000105378.9	3197	15	0	163	0	64	multi-exon	FALSE	canonical	3	23	junction_14	45.000680266967	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTTCTTGTCCTGCTT	1814	False	NA	NA	False	CATAAA	-30	NA	79744755	79730704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743488_79744651
Isoform_30062_37	chr12	-	1045	10	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	25	10501	9	25	5prime_fragment	FALSE	canonical	3	826	junction_9	114.99565209172	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCAGCTGTGGTGACA	NA	False	NA	-7	True	AATAAA	-17	NA	54842463	54803634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
Isoform_30069_6	chr12	-	1593	4	NIC	ENSMUSG00000062929.9	novel	2940	4	NA	NA	-56	4	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	126.518334200577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCCTTGTTTTCCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	54909457	54907076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_54908023_54908121_54908199_54908310_54908619_54909195
Isoform_30070_4	chr12	-	3067	4	NIC	ENSMUSG00000062929.9	novel	2940	4	NA	NA	-75	-20	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	126.518334200577	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATACATGAAAA	NA	False	NA	-31	True	NA	NA	NA	54909476	54905621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_54908023_54908121_54908199_54908310_54908619_54909195
Isoform_30071_89	chr12	-	2957	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	-20	3	-20	-3	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTAAAGCTGTTGAG	NA	False	NA	-14	True	AATAAA	-9	NA	54909682	54905604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
Isoform_30072_159	chr12	-	1389	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	74	1477	-5	2	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGCCTTGTTTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	54909588	54907078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
Isoform_30075_6	chr12	-	1445	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221088.2	474	4	-213	-758	-51	4	multi-exon	FALSE	canonical	3	25	junction_3	144.270579121316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCCTTGTTTTCCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	54909452	54907076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909195
Isoform_30076_11	chr12	-	1262	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	-21	1485	-21	2	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGCCTTGTTTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	54909604	54907078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
Isoform_30077_6	chr12	-	2733	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	-18	11	-18	-3	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTAAAGCTGTTGAG	NA	False	NA	-14	True	AATAAA	-9	NA	54909601	54905604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
Isoform_30078_5	chr12	-	2789	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	-69	6	10	2	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGCTGTTGAGATGTG	NA	False	NA	-9	True	AATAAA	-14	NA	54909652	54905599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
Isoform_3008_618	chr10	-	3002	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	-23	-29	0	29	multi-exon	FALSE	canonical	3	153	junction_9	18.1911617921159	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAAGCCCCTTGTCCTGC	1814	False	NA	NA	False	AAAAAG	-11	NA	79744755	79730739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
Isoform_30081_16	chr12	-	1182	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-55	1	24	-1	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTTGCCTTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	54909638	54907081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
Isoform_30083_15	chr12	-	2714	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-102	-1484	-23	-3	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTTGAGATGTGTTT	NA	False	NA	-6	True	AATAAA	-17	NA	54909685	54905596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
Isoform_30085_5	chr12	-	5574	26	ISM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	566	2	-5	-2	3prime_fragment	FALSE	canonical	2	24	junction_21	6.49307323229917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCTGAATTCTGAAG	NA	False	NA	-10	True	AATAAA	-16	NA	55032726	54940337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450
Isoform_30086_17	chr12	-	5614	27	FSM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	173	1	2	-1	multi-exon	TRUE	canonical	2	19	junction_26	7.265566842199	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCTGAATTCTGAAGT	NA	False	NA	-9	True	AATAAA	-17	NA	55033119	54940336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
Isoform_30089_9	chr12	-	4665	21	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	6372	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	9.86711710683521	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCTGAATTCTGAAG	1907	False	NA	-10	True	AATAAA	-16	NA	54984465	54940337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54984350
Isoform_30092_6	chr12	-	1156	8	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	1	-9	combination_of_known_junctions	FALSE	canonical	3	37	junction_4	59.7586984531652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATATATCTGAAA	NA	False	NA	-23	True	AATAAA	-16	NA	55126888	55092469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
Isoform_30093_18	chr12	-	1433	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	-350	22	-350	-7	multi-exon	FALSE	canonical	3	143	junction_4	27.3898536256157	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATCTGAAATG	NA	False	NA	-21	True	AATAAA	-18	NA	55127245	55092467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
Isoform_30094_117	chr12	-	1058	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	25	22	19	-7	multi-exon	FALSE	canonical	3	143	junction_4	27.3898536256157	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATCTGAAATG	NA	False	NA	-21	True	AATAAA	-18	NA	55126870	55092467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
Isoform_30095_29	chr12	-	1113	8	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	1105	8	NA	NA	-78	0	multi-exon	FALSE	canonical	3	143	junction_4	24.4423520027957	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGAAATGTTTTGTT	NA	False	NA	-14	True	AATAAA	-25	NA	55201759	55092460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55201606
Isoform_30096_3	chr12	-	716	5	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	1105	8	NA	NA	-60	-7	multi-exon	FALSE	canonical	2	8	junction_3	88.6721489533213	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATCTGAAATG	NA	False	NA	-21	True	AATAAA	-18	NA	55201741	55092467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_-_55092729_55095671_55095763_55100085_55100193_55109772_55109895_55201606
Isoform_30098_18	chr12	-	1686	5	ISM	ENSMUSG00000062198.6	ENSMUST00000222572.2	798	6	-20	2966	-14	-2522	5prime_fragment	FALSE	canonical	3	37	junction_1	70.9449610613749	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55126909	55103060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
Isoform_30099_3	chr12	-	2020	5	ISM	ENSMUSG00000062198.6	ENSMUST00000222572.2	798	6	-356	2968	-350	-2524	5prime_fragment	FALSE	canonical	3	37	junction_1	70.9449610613749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55127245	55103062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
Isoform_3010_107	chr10	-	3198	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	-22	-226	1	-1	multi-exon	TRUE	canonical	3	153	junction_9	18.1911617921159	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGGCTGTCACCGTGG	1815	False	NA	-2	True	AATAAA	-17	NA	79744754	79730542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
Isoform_30100_8	chr12	-	1584	5	FSM	ENSMUSG00000062198.6	ENSMUST00000156852.2	4110	5	5	2521	1	-2521	multi-exon	FALSE	canonical	3	143	junction_1	29.9864552756741	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55126888	55103059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
Isoform_30101_8	chr12	-	2184	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	333	1818	-3	-1818	3prime_fragment	FALSE	canonical	3	216	junction_9	34.6025047262959	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTAGGTCTATTAAG	NA	False	NA	NA	False	ATTAAA	-20	NA	55349450	55327593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
Isoform_30102_79	chr12	-	1490	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	333	2512	-3	-2512	3prime_fragment	FALSE	canonical	3	216	junction_9	34.6025047262959	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATATCTTGCTTACTAGA	NA	False	NA	NA	False	AATAAA	-27	NA	55349450	55328287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
Isoform_30103_8	chr12	-	2261	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	332	1742	-4	-1742	3prime_fragment	FALSE	canonical	3	216	junction_9	34.6025047262959	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATGTGTTTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	55349451	55327517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
Isoform_30105_10	chr12	-	1822	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	2	2511	2	-2511	intron_retention	FALSE	canonical	3	216	junction_9	34.6025047262959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTGCTTACTAGAG	NA	False	NA	NA	False	AATAAA	-28	NA	55349781	55328286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
Isoform_30108_61	chr12	-	1692	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	14	2510	14	-2510	multi-exon	FALSE	canonical	3	69	junction_13	62.3614203298973	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTTGCTTACTAGAGT	NA	False	NA	NA	False	AATAAA	-29	NA	55349769	55328285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
Isoform_3011_21	chr10	-	2980	15	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	231	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	50.5504900155906	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAAGCCCCTTGTCCTGC	2148	False	NA	NA	False	AAAAAG	-11	NA	79744421	79730739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744339
Isoform_30110_6	chr12	-	2386	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	7	1823	7	-1823	multi-exon	FALSE	canonical	3	69	junction_13	62.3614203298973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTTTGTCTAGGTCTA	NA	False	NA	NA	False	ATTAAA	-15	NA	55349776	55327598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
Isoform_30111_20	chr12	-	1671	14	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	14	-2513	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	69.7240545793362	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATCTTGCTTACTAG	NA	False	NA	NA	False	AATAAA	-26	NA	55349769	55328288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349717
Isoform_30118_188	chr12	-	1526	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	52	0	52	0	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	False	NA	-2	True	ATTAAA	-17	NA	55539380	55536194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
Isoform_30126_29	chr12	-	7899	41	FSM	ENSMUSG00000021027.18	ENSMUST00000085385.7	7901	41	2	0	2	0	multi-exon	FALSE	canonical	1	23	junction_22	22.9185514376454	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCCATGATCGTAT	9949	False	NA	-10	True	AATAAA	-25	NA	55867950	55649683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
Isoform_30128_5	chr12	-	3679	21	FSM	ENSMUSG00000021027.18	ENSMUST00000219529.2	3581	21	-95	-3	-9	3	multi-exon	FALSE	canonical	1	23	junction_2	17.649645888799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTTCTTATTTTTA	9938	False	NA	NA	False	ATTAAA	-15	NA	55867961	55759251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
Isoform_30134_96	chr12	-	1438	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	55	19	-4	-19	multi-exon	FALSE	canonical	3	215	junction_1	38.7193427113633	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGTGTATAAACTTT	NA	False	NA	NA	False	AATAAA	-14	NA	56392624	56375106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
Isoform_30135_4	chr12	-	1520	9	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	20	-26	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	97.3735558301123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGACAAATGAATGTGTAT	NA	False	NA	NA	False	AATAAA	-7	NA	56392659	56375113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389195_56392456
Isoform_30136_4	chr12	-	1782	8	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	19	-19	intron_retention	FALSE	canonical	3	215	junction_1	41.3481978977047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGTGTATAAACTTT	NA	False	NA	NA	False	AATAAA	-14	NA	56392660	56375106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
Isoform_30145_436	chr12	-	3638	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	64	407	64	-407	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTAGTTATTTTAAAAT	2742	False	NA	-10	True	AATAAA	-17	NA	59058739	59005575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
Isoform_30146_122	chr12	-	3686	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	64	359	64	-359	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGAGTGCTTTTTTTG	2742	False	NA	-12	True	AGTAAA	-21	NA	59058739	59005527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
Isoform_30149_61	chr12	-	4046	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	63	0	63	0	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	2741	False	NA	-27	True	NA	NA	NA	59058740	59005168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
Isoform_30150_48	chr12	-	4109	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	2678	False	NA	-27	True	NA	NA	NA	59058803	59005168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
Isoform_30154_91	chr12	-	3750	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	0	359	0	-359	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGAGTGCTTTTTTTG	2678	False	NA	-12	True	AGTAAA	-21	NA	59058803	59005527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
Isoform_30158_4	chr12	-	1442	7	FSM	ENSMUSG00000020993.10	ENSMUST00000217660.2	1486	7	38	6	2	-6	multi-exon	FALSE	canonical	0	0	junction_5	143.962668772151	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTACTTGAAAGTTTAT	NA	False	NA	-11	True	NA	NA	NA	59108220	59089919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59106041_59106298_59107941
Isoform_30159_309	chr12	-	1194	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	19	42	-6	-6	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTACTTGAAAGTTTAT	NA	False	NA	-11	True	NA	NA	NA	59108228	59089919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
Isoform_30161_14	chr12	-	1019	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	-11	247	0	-6	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTTGTGTTCAAATGAC	NA	False	NA	NA	False	ATTAAA	-19	NA	59108258	59090124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
Isoform_30165_55	chr12	-	3445	4	FSM	ENSMUSG00000035329.8	ENSMUST00000043204.8	3688	4	242	1	242	-1	multi-exon	FALSE	canonical	3	48	junction_1	0.942809041582063	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGTGATGAATTTTAT	NA	False	NA	-12	True	AATAAA	-14	NA	59266269	59247441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59249466_59251096_59251783_59252766_59252878_59265645
Isoform_30167_30	chr12	-	3734	4	FSM	ENSMUSG00000035329.8	ENSMUST00000043204.8	3688	4	-47	1	-47	-1	multi-exon	FALSE	canonical	3	48	junction_1	0.942809041582063	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGTGATGAATTTTAT	NA	False	NA	-12	True	AATAAA	-14	NA	59266558	59247441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59249466_59251096_59251783_59252766_59252878_59265645
Isoform_30169_4	chr12	-	3807	4	FSM	ENSMUSG00000035329.8	ENSMUST00000043204.8	3688	4	-122	3	-122	0	multi-exon	FALSE	canonical	3	48	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTATTGTGATGAATTTT	NA	False	NA	-14	True	AATAAA	-12	NA	59266633	59247443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_59249466_59251096_59251783_59252766_59252878_59265645
Isoform_3017_4	chr10	-	1786	8	NIC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	6	junction_7	58.1177551991451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9762	False	NA	-10	True	AATAAA	-13	NA	79752760	79745887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749516_79752656
Isoform_30171_22	chr12	-	6434	5	FSM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	23	2	2	-2	multi-exon	FALSE	canonical	3	14	junction_1	2.9474565306379	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTATCATGTAATCAT	NA	False	NA	-6	True	NA	NA	NA	65012285	64985608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65004512_65012182
Isoform_3018_260	chr10	-	1807	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	89	2	2	-2	multi-exon	FALSE	canonical	3	145	junction_7	14.1608831731957	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9771	False	NA	-10	True	AATAAA	-13	NA	79752751	79745887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
Isoform_30180_4647	chr12	-	954	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	64	4	-14	-4	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	4647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTATTGTGTGTTCTG	NA	False	NA	-6	True	AATAAA	-25	NA	65120717	65109201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
Isoform_30181_129	chr12	-	987	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	23	12	-18	0	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120758	65109209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
Isoform_3019_4	chr10	-	1889	7	NIC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	145	junction_6	11.977989072554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9766	False	NA	-10	True	AATAAA	-13	NA	79752756	79745887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79746974_79747775_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
Isoform_30200_271	chr12	-	3993	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-8	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	105.162095483737	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTGGGTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	65219362	65179509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65195650_65195679_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
Isoform_30202_68	chr12	-	4046	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	-32	3	-8	-3	multi-exon	FALSE	canonical	3	216	junction_12	54.2140181439599	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219386	65179510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
Isoform_30205_26	chr12	-	2802	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-8	-567	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	124.859637169435	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGCCTGTTTTCTTTAG	NA	False	NA	1	True	ATTAAA	-29	NA	65219362	65180074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65195650_65195679_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
Isoform_30206_74	chr12	-	3384	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219350	65179510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
Isoform_30208_10	chr12	-	5022	13	FSM	ENSMUSG00000047534.18	ENSMUST00000140391.8	5016	13	-8	2	-8	-2	multi-exon	FALSE	canonical	3	216	junction_11	56.3414072123395	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTGGGTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	65219386	65179509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
Isoform_30210_8	chr12	-	3222	13	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	152.324124448128	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATATTTGTTTCTGGGT	NA	False	NA	-10	True	AATAAA	-13	NA	65219363	65179512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65195650_65195679_65196325_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
Isoform_30222_2242	chr12	-	292	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	97	1	-35	-1	multi-exon	FALSE	canonical	3	25458	junction_2	210	2242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTGTGTGTGTTTTG	NA	False	NA	-11	True	AATAAA	-17	NA	69205863	69204496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69204596_69205434_69205535_69205770
Isoform_30223_2241	chr12	-	320	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	69	1	-63	-1	multi-exon	FALSE	canonical	3	25458	junction_2	210	2241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTGTGTGTGTTTTG	NA	False	NA	-11	True	AATAAA	-17	NA	69205891	69204496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69204596_69205434_69205535_69205770
Isoform_30226_2402	chr12	-	468	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	59	-1	-11	1	multi-exon	FALSE	canonical	3	5332	junction_1	0	2402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGCCTTGTGTTTTGA	NA	False	NA	-7	True	AATAAA	-15	NA	69230798	69229513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69229940_69230756
Isoform_30228_208	chr12	-	508	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	21	-3	21	0	multi-exon	FALSE	canonical	3	5332	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTGTTTTGATT	NA	False	NA	-5	True	AATAAA	-17	NA	69230836	69229511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69229940_69230756
Isoform_3023_36	chr10	-	2161	11	FSM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	62	2	62	-2	multi-exon	FALSE	canonical	3	84	junction_4	19.7891384350103	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820102	79812953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
Isoform_30231_225	chr12	-	2072	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	1296	22	1296	-22	multi-exon	FALSE	canonical	3	240	junction_2	19	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATTCATTGAGTT	NA	False	NA	-30	True	ATTAAA	-7	NA	69243907	69235882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69237169_69239581_69239726_69243265
Isoform_30236_494	chr12	-	1690	19	FSM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	12	4	-4	-4	multi-exon	TRUE	canonical	3	369	junction_1	34.9372011570955	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCTACACATTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	69274957	69248550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
Isoform_3024_40	chr10	-	2095	11	FSM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	128	2	128	-2	multi-exon	FALSE	canonical	3	84	junction_4	19.7891384350103	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820036	79812953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
Isoform_30244_486	chr12	-	3693	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	18	1021	2	25	multi-exon	FALSE	canonical	3	259	junction_6	33.0300526036517	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTTTCCGTGTATTCA	NA	False	NA	-5	True	AAGAAA	-5	NA	69403921	69358316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
Isoform_30247_20	chr12	-	3950	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	2	780	2	266	multi-exon	TRUE	canonical	3	259	junction_6	33.0300526036517	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAGTATCTTGAC	NA	False	NA	NA	False	NA	NA	NA	69403937	69358075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
Isoform_30259_14	chr12	-	1067	6	NIC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	17	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	61.6071424430642	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTGAAGCAGCATGGTT	NA	False	NA	-7	True	AATAAA	-22	NA	69629772	69624403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_69624715_69626607_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_30260_11	chr12	-	1104	6	NIC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	-24	-8	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	61.6071424430642	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCAAGTCTGAAGCAGC	NA	False	NA	-13	True	AATAAA	-16	NA	69629815	69624409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_69624715_69626607_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_30261_51	chr12	-	1057	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	51	1	-42	-1	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAAGCAGCATGGTTG	NA	False	NA	-6	True	AATAAA	-23	NA	69629833	69624402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_30262_74	chr12	-	1008	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	93	8	0	-8	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCAAGTCTGAAGCAGC	NA	False	NA	-13	True	AATAAA	-16	NA	69629791	69624409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_30263_7	chr12	-	1887	7	NNC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	-5	891	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.983463438165	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTGACTCTGCTTCC	NA	False	NA	-9	True	AATAAA	-13	NA	69629796	69623510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_69623838_69623862_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_30265_8	chr12	-	1016	6	NIC	ENSMUSG00000049882.11	novel	1018	6	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	70.332353863638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAAGCAGCATGGTTG	NA	False	NA	-6	True	AATAAA	-23	NA	69629808	69624402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629400_69629494
Isoform_30266_27	chr12	-	1002	6	FSM	ENSMUSG00000049882.11	ENSMUST00000238784.2	875	6	88	-215	-5	-8	multi-exon	FALSE	canonical	3	55	junction_4	48.4710222710435	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCAAGTCTGAAGCAGC	NA	False	NA	-13	True	AATAAA	-16	NA	69629796	69624409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
Isoform_30268_5	chr12	-	1863	7	NNC	ENSMUSG00000049882.11	novel	875	6	NA	NA	6	891	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	68.8670216189626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTGACTCTGCTTCC	NA	False	NA	-9	True	AATAAA	-13	NA	69629783	69623510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_69623838_69623862_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
Isoform_30269_4	chr12	-	1907	5	ISM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	97	1070	2	-847	5prime_fragment	FALSE	canonical	3	142	junction_3	19.0656759649376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACATGTCTCGGTTTTT	NA	False	NA	NA	False	CATAAA	-13	NA	69629787	69625471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_30270_4	chr12	-	1972	5	ISM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	32	1070	32	-847	5prime_fragment	FALSE	canonical	3	142	junction_3	19.0656759649376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACATGTCTCGGTTTTT	NA	False	NA	NA	False	CATAAA	-13	NA	69629852	69625471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_30271_3	chr12	-	1878	5	ISM	ENSMUSG00000049882.11	ENSMUST00000238220.2	1018	6	21	1012	19	-843	5prime_fragment	FALSE	canonical	3	8	junction_4	78.1488963453739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTCGGTTTTTAGTC	NA	False	NA	NA	False	CATAAA	-17	NA	69629770	69625467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_69626785_69627891_69628012_69629049_69629120_69629304_69629400_69629494
Isoform_30272_6	chr12	-	1875	5	ISM	ENSMUSG00000049882.11	ENSMUST00000238784.2	875	6	117	848	22	-848	5prime_fragment	FALSE	canonical	3	55	junction_3	53.5741308842243	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACATGTCTCGGTTTT	NA	False	NA	NA	False	CATAAA	-12	NA	69629767	69625472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
Isoform_30274_23	chr12	-	5591	23	FSM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	9	-1088	9	1	multi-exon	TRUE	canonical	3	44	junction_4	8.63397096042456	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTGCAATATTGTTT	NA	False	NA	-4	True	AATAAA	-22	NA	69728606	69630538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
Isoform_30275_8	chr12	-	5782	23	FSM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	-182	-1088	-171	1	multi-exon	FALSE	canonical	3	44	junction_4	8.63397096042456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTGCAATATTGTTT	NA	False	NA	-4	True	AATAAA	-22	NA	69728797	69630538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
Isoform_3028_13	chr10	-	2216	10	FSM	ENSMUSG00000013858.15	ENSMUST00000124536.2	1767	10	-211	-238	79	-2	multi-exon	FALSE	canonical	3	99	junction_9	17.0257611638915	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820085	79812953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
Isoform_30284_480	chr12	-	3314	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	10	16	10	-16	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTAATGTTTCTTG	NA	False	NA	-16	True	AATAAA	-18	NA	69771637	69737222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
Isoform_30293_42	chr12	-	4602	10	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	10	-17	at_least_one_novel_splicesite	FALSE	non_canonical	2	9	junction_5	170.282118849866	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTAATGTTTCTT	NA	False	NA	-17	True	AATAAA	-17	NA	69771637	69737223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69753093_69753127_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
Isoform_30296_39	chr12	-	3125	8	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	0	-17	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	181.049998731887	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTAATGTTTCTT	NA	False	NA	-17	True	AATAAA	-17	NA	69771647	69737223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69759395_69759528_69768085_69768238_69768851_69768968_69771427
Isoform_30297_44	chr12	-	3096	8	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	45	-1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	181.049998731887	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTGTTATGATCATAT	NA	False	NA	-1	True	AATAAA	-33	NA	69771602	69737207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69759395_69759528_69768085_69768238_69768851_69768968_69771427
Isoform_3030_8	chr10	-	2222	10	NIC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	126	-2	intron_retention	FALSE	canonical	3	84	junction_3	20.8273324690844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820038	79812953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79813688_79813796_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
Isoform_30303_113	chr12	-	4402	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACTATAAAGTATTTG	NA	False	NA	NA	False	AATAAA	-11	NA	69939894	69850536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
Isoform_3031_4	chr10	-	2221	11	NNC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	77	-4	intron_retention	TRUE	non_canonical	0	0	junction_10	40.7155989763137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCGTGTAGTTCCTCA	NA	False	NA	-21	True	AATAAA	-14	NA	79820087	79812955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_79813688_79813796_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743_79819981_79820028
Isoform_30310_23	chr12	-	4455	31	NIC	ENSMUSG00000034761.16	novel	4452	31	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATAAAGTATTTGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	69939943	69850532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
Isoform_30316_161	chr12	-	2596	5	FSM	ENSMUSG00000021067.9	ENSMUST00000021467.8	2524	5	-76	4	-76	-4	multi-exon	FALSE	canonical	3	134	junction_4	6.57171971404746	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTCTGGTCCTTGAA	NA	False	NA	-18	True	ATTAAA	-13	NA	70033852	70011789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033447
Isoform_30318_4	chr12	-	2758	5	FSM	ENSMUSG00000021067.9	ENSMUST00000021467.8	2524	5	-238	4	-238	-4	multi-exon	FALSE	canonical	3	134	junction_4	6.57171971404746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTCTGGTCCTTGAA	NA	False	NA	-18	True	ATTAAA	-13	NA	70034014	70011789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033447
Isoform_30319_3	chr12	-	3370	5	FSM	ENSMUSG00000021067.9	ENSMUST00000021467.8	2524	5	-80	-766	-80	766	multi-exon	FALSE	canonical	3	134	junction_4	6.57171971404746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACTGGAAAGTACCTA	NA	False	NA	NA	False	AATAAA	-15	NA	70033856	70011019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033447
Isoform_3032_6	chr10	-	2295	9	NIC	ENSMUSG00000013858.15	novel	1767	10	NA	NA	125	-2	intron_retention	FALSE	canonical	3	99	junction_8	17.8605710994918	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820039	79812953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79813688_79813796_79814155_79814225_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
Isoform_30321_3	chr12	-	6308	26	NNC	ENSMUSG00000021068.18	novel	7183	30	NA	NA	-14820	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_25	10.1587400793602	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	872	False	NA	NA	False	AATAAA	-17	NA	70112878	70065512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70112704
Isoform_30322_7	chr12	-	4690	29	NIC	ENSMUSG00000021068.18	novel	7183	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_28	8.80949163443288	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	70158801	70065512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
Isoform_30325_23	chr12	-	2767	20	FSM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	51	7	-20	1	multi-exon	FALSE	canonical	2	8	junction_17	3.93154724147013	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATAGCCTGCTTGGATT	6251	False	NA	-7	True	AATAAA	-21	NA	70274406	70237591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
Isoform_30326_18	chr12	-	2818	20	FSM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	0	7	0	1	multi-exon	FALSE	canonical	2	8	junction_17	3.93154724147013	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATAGCCTGCTTGGATT	6200	False	NA	-7	True	AATAAA	-21	NA	70274457	70237591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
Isoform_30327_6	chr12	-	898	3	FSM	ENSMUSG00000085622.10	ENSMUST00000136690.3	1063	3	256	-91	19	91	multi-exon	FALSE	canonical	3	10	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTGTTTTCTCCTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	71062350	71056477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_71057254_71061229_71061282_71062280
Isoform_30329_135	chr12	-	871	5	FSM	ENSMUSG00000021079.17	ENSMUST00000221559.2	718	5	-29	-124	10	1	multi-exon	FALSE	canonical	3	163	junction_4	64.161417534216	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	-17	True	AATAAA	-14	NA	71183437	71169945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71183328
Isoform_3033_3	chr10	-	2371	9	NIC	ENSMUSG00000013858.15	novel	1767	10	NA	NA	49	-2	intron_retention	FALSE	canonical	3	99	junction_8	17.8605710994918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820115	79812953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79813688_79813796_79814155_79814225_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
Isoform_30331_49	chr12	-	787	4	FSM	ENSMUSG00000021079.17	ENSMUST00000021486.10	794	4	8	-1	8	1	multi-exon	FALSE	canonical	3	89	junction_3	97.112763779479	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	-17	True	AATAAA	-14	NA	71183439	71169945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71183328
Isoform_30333_5	chr12	-	2657	4	FSM	ENSMUSG00000021079.17	ENSMUST00000221815.2	1193	4	9	-1473	0	0	multi-exon	FALSE	canonical	3	163	junction_3	67.9607729993315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183449	71169946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_71172332_71173106_71173172_71178774_71178861_71183328
Isoform_30334_15	chr12	-	1750	5	FSM	ENSMUSG00000019718.9	ENSMUST00000019862.3	1831	5	24	57	24	-57	multi-exon	FALSE	canonical	3	12	junction_4	3.20156211871642	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGAGGTGGGTTATTAT	NA	False	NA	NA	False	AATAAA	-21	NA	72132189	72120258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_72120811_72123917_72124056_72124137_72124261_72126260_72126431_72131422
Isoform_30335_37	chr12	-	1520	7	FSM	ENSMUSG00000021087.19	ENSMUST00000021497.16	1544	7	23	1	-15	-1	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACATTTCTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	72283475	72258527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
Isoform_30337_56	chr12	-	1200	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	128	57	-1	0	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTTGTACAAGAGC	NA	False	NA	-14	True	AATAAA	-18	NA	72711555	72697183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
Isoform_30338_37	chr12	-	1256	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	128	1	-1	-1	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGACTGCAGACTTAG	NA	False	NA	42	True	AATAAA	-15	NA	72711555	72697127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
Isoform_30340_7	chr12	-	1316	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	66	3	-37	-3	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTAAGACTGCAGACTT	NA	False	NA	40	True	AATAAA	-13	NA	72711617	72697129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
Isoform_30341_3	chr12	-	2008	5	ISM	ENSMUSG00000021098.15	ENSMUST00000044000.12	2051	18	46	30552	-3	-2	5prime_fragment	FALSE	canonical	3	18	junction_2	8.16624148553054	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTATGGGTATTTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	72964634	72958434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964481
Isoform_30342_3	chr12	-	1999	5	ISM	ENSMUSG00000021098.15	ENSMUST00000131033.8	1939	8	-78	5433	-29	-8	5prime_fragment	FALSE	canonical	3	10	junction_4	10.280442597476	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTAATGTGTATGGGTA	NA	False	NA	NA	False	AATAAA	-13	NA	72964709	72958440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964559
Isoform_30343_3	chr12	-	535	4	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	-2	132	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	9.42809041582063	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCTGCCTATTATAAA	NA	False	NA	NA	False	AGTAAA	-20	NA	72964682	72959828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_72960049_72963447_72963505_72963596_72963654_72964481
Isoform_30345_12	chr12	-	2682	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	498	136	498	-136	multi-exon	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGGGTTGGCTTGCTCA	9093	False	NA	NA	False	ATTAAA	-14	NA	73093455	73088736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73090604_73092640
Isoform_30347_10	chr12	-	2715	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	467	134	467	-134	multi-exon	FALSE	canonical	3	15	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTGGCTTGCTCATG	9062	False	NA	NA	False	ATTAAA	-16	NA	73093486	73088734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73090604_73092640
Isoform_30352_28	chr12	-	6275	3	FSM	ENSMUSG00000034460.10	ENSMUST00000043208.8	6402	3	127	0	127	0	multi-exon	FALSE	canonical	3	64	junction_1	15	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGTTGAAGAAAGATT	NA	False	NA	-1	True	AATAAA	-18	NA	73160072	73146382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73151013_73155434_73156124_73159116
Isoform_30353_4	chr12	-	2950	3	FSM	ENSMUSG00000034460.10	ENSMUST00000043208.8	6402	3	2	3450	2	382	multi-exon	FALSE	canonical	3	64	junction_1	15	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTGGTTTTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-27	NA	73160197	73149832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73151013_73155434_73156124_73159116
Isoform_30358_73	chr12	-	6192	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTGTGTTGAAGAAAGA	NA	False	NA	-3	True	AATAAA	-16	NA	73160197	73146384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
Isoform_30362_3	chr12	-	2787	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	-13	379	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCAGTTGGTTTTTTGT	NA	False	NA	NA	False	ATTAAA	-24	NA	73160243	73149835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
Isoform_30363_3	chr12	-	1933	3	FSM	ENSMUSG00000034460.10	ENSMUST00000175693.3	6817	3	22	4862	-9	-4862	multi-exon	FALSE	canonical	3	77	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTCAAGCAGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	73160208	73155076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73156124_73159116_73159932_73160137
Isoform_30366_13	chr12	-	2433	5	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	24	81	intron_retention	FALSE	canonical	3	14	junction_4	37.6056844107377	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGGATATTGTATAGAC	NA	False	NA	-14	True	AGTAAA	-14	NA	73333459	73327173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73332677
Isoform_30367_5	chr12	-	1756	6	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	1	89	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	42.8205558114324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATAGACTGATTTTT	NA	False	NA	-6	True	AGTAAA	-22	NA	73333482	73327165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73332677_73332750_73333457
Isoform_30368_5	chr12	-	2143	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-81	4	-80	-4	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTTTGTAATTCAAGGT	NA	False	NA	-10	True	AATAAA	-17	NA	73333564	73326788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
Isoform_30369_20	chr12	-	2076	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-8	-2	-7	2	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAATTCAAGGTATTTCT	NA	False	NA	-4	True	AATAAA	-23	NA	73333491	73326782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
Isoform_30370_74	chr12	-	1691	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-13	388	-12	82	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGATATTGTATAGACT	NA	False	NA	-13	True	AGTAAA	-15	NA	73333496	73327172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
Isoform_30371_7	chr12	-	1757	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-79	388	-78	82	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGATATTGTATAGACT	NA	False	NA	-13	True	AGTAAA	-15	NA	73333562	73327172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
Isoform_30372_4	chr12	-	2664	4	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-27	85	intron_retention	FALSE	canonical	3	70	junction_3	17.6823829464998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATATTGTATAGACTGAT	NA	False	NA	-10	True	AGTAAA	-18	NA	73333511	73327169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_73327407_73327778_73329511_73331408_73332050_73333457
Isoform_30374_14	chr12	-	1020	4	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	7	83	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	38.0029238641216	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATATTGTATAGACTG	NA	False	NA	-12	True	AGTAAA	-16	NA	73333476	73327171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_73327407_73329385_73329511_73331408_73332050_73333457
Isoform_30375_6	chr12	-	3027	4	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-36	89	intron_retention	TRUE	non_canonical	0	0	junction_1	46.5689453033528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATAGACTGATTTTT	NA	False	NA	-6	True	AGTAAA	-22	NA	73333520	73327165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_73327676_73327697_73329511_73331408_73332050_73333457
Isoform_30377_100	chr12	-	3256	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-54	1608	-9	10	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCATCGTGACCAAAT	NA	False	NA	-6	True	AATAAA	-24	NA	75643028	75499262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
Isoform_30378_216	chr12	-	3227	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-25	1608	3	10	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCATCGTGACCAAAT	NA	False	NA	-6	True	AATAAA	-24	NA	75642999	75499262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
Isoform_30381_38	chr12	-	4841	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-32	1	-4	-1	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACTGGATGCAGGGAT	NA	False	NA	NA	False	AATAAA	-32	NA	75643006	75497655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
Isoform_30383_14	chr12	-	5708	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-31	-867	-3	867	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTGTCTGGCTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	75643005	75496787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
Isoform_30388_6	chr12	-	5732	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-57	-865	-12	865	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTTGTTGTCTGGCTT	NA	False	NA	NA	False	TATAAA	-13	NA	75643031	75496789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
Isoform_30390_5	chr12	-	4651	13	NIC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-2	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	56.7171343892949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTGAATGTGACTGGAT	NA	False	NA	NA	False	AATAAA	-24	NA	75643021	75497663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75639942_75640107_75642408
Isoform_30393_7	chr12	-	1409	3	FSM	ENSMUSG00000021051.11	ENSMUST00000218930.2	1382	3	-27	0	-10	0	multi-exon	FALSE	canonical	3	165	junction_2	10	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTCTCTTTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	75643029	75561948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75562573_75639942_75640107_75642408
Isoform_30398_85	chr12	-	2977	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	3	-1	3	1	multi-exon	FALSE	canonical	3	148	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGGTATCTTGTCTTA	6413	False	NA	-1	True	AATAAA	-18	NA	75716308	75677368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75680283_75716245
Isoform_30400_161	chr12	-	3261	3	FSM	ENSMUSG00000021054.7	ENSMUST00000021450.6	3323	3	43	19	10	-19	multi-exon	FALSE	canonical	3	57	junction_1	0.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATCTTTCTTCTTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	75782460	75761041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75763439_75769425_75769516_75781686
Isoform_30401_3	chr12	-	1070	2	FSM	ENSMUSG00000021054.7	ENSMUST00000220285.2	3200	2	5	2125	5	-2125	multi-exon	FALSE	canonical	3	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	75782465	75769224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75769516_75781686
Isoform_30402_4	chr12	-	1630	3	NIC	ENSMUSG00000056459.15	novel	1672	3	NA	NA	24	11	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	31	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTTAAGAGTGAGTGA	NA	False	NA	-1	True	ATTAAA	-30	NA	76416352	76395662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_76396974_76402662_76402843_76416213
Isoform_30404_7	chr12	-	1622	3	FSM	ENSMUSG00000056459.15	ENSMUST00000167011.8	1681	3	14	45	14	0	multi-exon	FALSE	canonical	0	0	junction_2	42	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTATGAGCTTTTCTATA	NA	False	NA	-2	True	ATTAAA	-16	NA	76416224	76395718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76397048_76402662_76402843_76416111
Isoform_30405_10	chr12	-	1724	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	-56	4	-56	-4	multi-exon	FALSE	canonical	3	78	junction_2	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATCCTATGAGCTTTTC	NA	False	NA	-6	True	ATTAAA	-12	NA	76416432	76395722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76397048_76402662_76402843_76416213
Isoform_30406_24	chr12	-	1682	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	44	-54	44	9	multi-exon	FALSE	canonical	3	78	junction_2	3	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAACTTTAAGAGTGAGT	NA	False	NA	-3	True	ATTAAA	-28	NA	76416332	76395664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76397048_76402662_76402843_76416213
Isoform_30407_44	chr12	-	1649	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	19	4	19	-4	multi-exon	FALSE	canonical	3	78	junction_2	3	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATCCTATGAGCTTTTC	NA	False	NA	-6	True	ATTAAA	-12	NA	76416357	76395722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76397048_76402662_76402843_76416213
Isoform_30408_7	chr12	-	1771	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	-48	-51	-48	6	multi-exon	FALSE	canonical	3	78	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGAAACTTTAAGAGTG	NA	False	NA	-6	True	ATTAAA	-25	NA	76416424	76395667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76397048_76402662_76402843_76416213
Isoform_30409_4	chr12	-	1864	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	-148	-44	-148	-1	multi-exon	FALSE	canonical	3	78	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTAATGTAGAAACTTT	NA	False	NA	-13	True	ATTAAA	-18	NA	76416524	76395674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76397048_76402662_76402843_76416213
Isoform_30412_9	chr12	-	3350	5	NNC	ENSMUSG00000056459.15	novel	1672	3	NA	NA	13	574	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.5555175037873	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTGTTTTTATTCCCCC	NA	False	NA	NA	False	NA	NA	NA	76416363	76393981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_76394237_76394260_76395269_76395290_76397048_76402662_76402843_76416213
Isoform_30415_15	chr12	-	6921	32	ISM	ENSMUSG00000021061.16	ENSMUST00000021458.13	10394	36	400	16929	-124	-1287	5prime_fragment	FALSE	canonical	2	6	junction_26	5.26211994803944	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGGGGAAACACTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	76756921	76644190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_76644576_76645058_76645109_76645367_76645565_76646598_76646684_76647096_76647236_76648633_76648879_76650162_76650538_76650795_76651001_76652262_76652394_76653019_76653299_76654755_76654846_76655264_76655472_76655814_76656079_76657517_76657665_76658586_76658678_76658769_76658973_76659337_76660095_76665812_76665951_76667429_76668301_76668916_76669068_76669682_76669986_76671000_76671160_76671769_76671888_76673721_76673910_76674655_76674769_76675249_76675366_76675668_76675750_76676386_76676479_76677358_76677533_76679153_76679306_76696550_76696753_76756708
Isoform_30416_3	chr12	-	8200	32	ISM	ENSMUSG00000021061.16	ENSMUST00000021458.13	10394	36	405	15645	-119	-3	5prime_fragment	FALSE	canonical	2	6	junction_26	5.26211994803944	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTTCTCTGGGGGAG	NA	False	NA	NA	False	AATAAA	-14	NA	76756916	76642906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_76644576_76645058_76645109_76645367_76645565_76646598_76646684_76647096_76647236_76648633_76648879_76650162_76650538_76650795_76651001_76652262_76652394_76653019_76653299_76654755_76654846_76655264_76655472_76655814_76656079_76657517_76657665_76658586_76658678_76658769_76658973_76659337_76660095_76665812_76665951_76667429_76668301_76668916_76669068_76669682_76669986_76671000_76671160_76671769_76671888_76673721_76673910_76674655_76674769_76675249_76675366_76675668_76675750_76676386_76676479_76677358_76677533_76679153_76679306_76696550_76696753_76756708
Isoform_30417_41	chr12	-	1014	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	-2	-2	-2	-2	multi-exon	FALSE	canonical	3	177	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGTCTCTGTCTTCCT	NA	False	NA	-3	True	AATAAA	-18	NA	76842275	76839108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76839775_76841927
Isoform_30419_85	chr12	-	903	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	111	-4	109	0	multi-exon	FALSE	canonical	3	177	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTCTCTGTCTTCCTTT	NA	False	NA	-1	True	AATAAA	-20	NA	76842162	76839106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76839775_76841927
Isoform_3042_2500	chr10	-	1063	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	85	0	0	0	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	2500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5600	False	NA	-19	True	ATTAAA	-19	NA	79875544	79871782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
Isoform_30421_232	chr12	-	3094	7	FSM	ENSMUSG00000021062.16	ENSMUST00000021459.14	3158	7	64	0	-27	0	multi-exon	FALSE	canonical	3	60	junction_1	4.01732359773132	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGGGTCTGTATGAA	NA	False	NA	-2	True	AATAAA	-18	NA	76869263	76844733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
Isoform_30424_29	chr12	-	3343	7	FSM	ENSMUSG00000021062.16	ENSMUST00000021459.14	3158	7	-187	2	168	-2	multi-exon	FALSE	canonical	3	60	junction_1	4.01732359773132	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGTCTGTATG	NA	False	NA	-4	True	AATAAA	-16	NA	76869514	76844735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
Isoform_30426_10	chr12	-	2039	6	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.3032186618072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGTAGTAGTGTCTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	77008975	76984046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008036_77008064_77008763
Isoform_30427_11	chr12	-	2068	5	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5714979643834	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGTGTCTTCTTAAC	NA	False	NA	0	True	AATAAA	-20	NA	77009027	76984042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008763
Isoform_30428_17	chr12	-	2011	5	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5714979643834	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008973	76984045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008763
Isoform_3043_39	chr10	-	1216	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	-68	0	-68	0	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5447	False	NA	-19	True	ATTAAA	-19	NA	79875697	79871782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
Isoform_30430_22	chr12	-	1973	5	FSM	ENSMUSG00000059436.14	ENSMUST00000110395.11	1942	5	-32	1	-16	-1	multi-exon	FALSE	canonical	3	16	junction_4	22.1697992773954	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTAGTAGTGTCTTCTTAA	NA	False	NA	-1	True	AATAAA	-19	NA	77008991	76984043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008036_77008064_77008763
Isoform_30432_106	chr12	-	1926	4	FSM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	2	-2	2	2	multi-exon	FALSE	canonical	3	49	junction_1	8.28653526310404	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008973	76984045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008763
Isoform_30435_10	chr12	-	2732	5	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	16	junction_4	22.1288838399048	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTAGTAGTGTCTTCTTA	NA	False	NA	-2	True	AATAAA	-18	NA	77008992	76984044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_76986289_76986740_76986865_76999942_77000051_77008036_77008064_77008763
Isoform_30437_29	chr12	-	2685	4	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	2	2	intron_retention	FALSE	canonical	3	20	junction_1	20.7257220756131	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008973	76984045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_76986289_76986740_76986865_76999942_77000051_77008763
Isoform_30438_7	chr12	-	3140	3	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	56	junction_2	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGTAGTAGTGTCTTC	NA	False	NA	-5	True	AATAAA	-15	NA	77008978	76984047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_76986865_76999942_77000051_77008763
Isoform_30441_792	chr12	-	1318	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	86	2263	-57	14	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGTTGTTTCTTTTT	55	False	NA	-7	True	AGTAAA	-10	NA	78908326	78889761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
Isoform_30442_68	chr12	-	1349	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	55	2263	55	14	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGTTGTTTCTTTTT	24	False	NA	-7	True	AGTAAA	-10	NA	78908357	78889761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
Isoform_30445_27	chr12	-	2536	8	NIC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-35	14	intron_retention	FALSE	canonical	3	904	junction_7	87.6938086847222	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGTTGTTTCTTTTT	77	False	NA	-7	True	AGTAAA	-10	NA	78908304	78889761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
Isoform_3045_73	chr10	-	1138	6	FSM	ENSMUSG00000004667.19	ENSMUST00000152843.2	900	6	-12	-226	-3	0	multi-exon	FALSE	canonical	3	2552	junction_2	164.012926319848	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5597	False	NA	-19	True	ATTAAA	-19	NA	79875547	79871782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79872136_79872360_79872433_79872597_79872808_79873021_79873219_79874272_79874448_79875416
Isoform_30451_41	chr12	-	1599	9	FSM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	-18	2	-18	-2	multi-exon	FALSE	canonical	3	37	junction_6	8.60868021243675	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTATGGTTCTTGTAGT	NA	False	NA	-2	True	AATAAA	-19	NA	78953756	78935466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
Isoform_30454_19	chr12	-	3875	3	FSM	ENSMUSG00000046157.14	ENSMUST00000056660.13	3860	3	-11	-4	-11	-1	multi-exon	FALSE	canonical	3	11	junction_2	2.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTGTGACCCATCTGT	NA	False	NA	-2	True	CATAAA	-25	NA	79054062	79008569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79011948_79024534_79024716_79053746
Isoform_30456_5	chr12	-	3734	3	NIC	ENSMUSG00000046157.14	novel	3621	3	NA	NA	139	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCTGTGACCCATCTG	NA	False	NA	-3	True	CATAAA	-24	NA	79054262	79008570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_79011948_79024534_79024716_79054086
Isoform_30459_7	chr12	-	3768	3	NNC	ENSMUSG00000046157.14	novel	3656	3	NA	NA	-1742	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGACCCATCTGTT	NA	False	NA	-1	True	CATAAA	-26	NA	79056143	79008568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_79011948_79024534_79024716_79055935
Isoform_30461_8	chr12	-	3888	3	NIC	ENSMUSG00000046157.14	novel	3621	3	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCTGTGACCCATCTG	NA	False	NA	-3	True	CATAAA	-24	NA	79054073	79008570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_79011951_79024534_79024716_79053746
Isoform_30462_5	chr12	-	3578	3	FSM	ENSMUSG00000046157.14	ENSMUST00000174721.8	537	3	8	-3049	8	0	multi-exon	FALSE	canonical	3	8	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGGCTGTGACCCAT	NA	False	NA	-6	True	CATAAA	-21	NA	79054106	79008573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79011951_79024534_79024716_79054086
Isoform_30463_9	chr12	-	2308	4	NIC	ENSMUSG00000021120.12	novel	2339	4	NA	NA	12	-8	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	42.4342628858646	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAGTATGGACTTGT	NA	False	NA	-9	True	AATAAA	-22	NA	79136407	79127445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_79129271_79130389_79130474_79132420_79132626_79136213
Isoform_30464_26	chr12	-	2381	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	-51	9	-51	-9	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAAAGTATGGACTTG	NA	False	NA	-10	True	AATAAA	-45	NA	79136476	79127446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
Isoform_30465_143	chr12	-	2319	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	10	10	4	-10	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACCAAAGTATGGACTT	NA	False	NA	-11	True	AATAAA	-44	NA	79136415	79127447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
Isoform_30471_3	chr12	-	1083	3	FSM	ENSMUSG00000021120.12	ENSMUST00000217998.2	2868	3	5	1780	5	-1780	multi-exon	FALSE	canonical	3	104	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATCCTGTGGCTTGTC	NA	False	NA	NA	False	ATTAAA	-23	NA	79136414	79129801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79130474_79132420_79132631_79136213
Isoform_30473_476	chr12	-	1021	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	226	243	7	69	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTACATGTATAACATTA	NA	False	NA	-6	True	AATAAA	-21	NA	79219215	79203033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
Isoform_30475_57	chr12	-	1238	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	9	243	9	69	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTACATGTATAACATTA	NA	False	NA	-6	True	AATAAA	-21	NA	79219432	79203033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
Isoform_30476_32	chr12	-	1281	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	-34	243	-34	69	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTACATGTATAACATTA	NA	False	NA	-6	True	AATAAA	-21	NA	79219475	79203033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
Isoform_30477_10	chr12	-	1122	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	230	138	11	15	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTGCACAGATGTTC	NA	False	NA	99	True	AATAGA	-19	NA	79219211	79202928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
Isoform_30479_9	chr12	-	956	5	FSM	ENSMUSG00000021124.14	ENSMUST00000162789.9	1059	5	12	91	12	68	multi-exon	FALSE	canonical	3	23	junction_4	311.173183291877	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTACATGTATAACATT	NA	False	NA	-7	True	AATAAA	-20	NA	79219210	79203034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79218993
Isoform_30482_97	chr12	-	2817	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	440	5	-60	-5	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTTTATGGGGATA	NA	False	NA	-23	True	AATAAA	-35	NA	79238627	79221115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
Isoform_30485_13	chr12	-	2890	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	440	-68	-60	68	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTCACTTGTCAATGAA	NA	False	NA	50	True	ATTAAA	-19	NA	79238627	79221042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
Isoform_30486_6	chr12	-	2996	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	433	-167	-67	167	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACACAGTTATGCAG	NA	False	NA	NA	False	ATTAAA	-20	NA	79238634	79220943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
Isoform_30489_21	chr12	-	9363	42	FSM	ENSMUSG00000066440.6	ENSMUST00000021547.8	9391	42	27	1	1	-1	multi-exon	TRUE	canonical	3	23	junction_36	10.4802014412253	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTAGCTTCATCAGCT	NA	False	NA	-6	True	AATAAA	-16	NA	79343051	79279120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320066_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
Isoform_30490_11	chr12	-	2204	3	FSM	ENSMUSG00000066440.6	ENSMUST00000219571.2	824	3	-3	-1377	1	-6	multi-exon	FALSE	canonical	3	37	junction_2	9.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79343055	79338826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_79340679_79342250_79342547_79342999
Isoform_30491_347	chr12	-	2983	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	5	2	5	-2	multi-exon	FALSE	canonical	3	257	junction_1	0	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTTGTCTATAGGTTT	9172	False	NA	90	True	AATAAA	-16	NA	80159782	80154529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80157323_80159592
Isoform_30504_19	chr12	-	3741	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-302	-775	-22	0	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTTGCTTGTTCCTT	NA	False	NA	-5	True	ATTAAA	-16	NA	80307167	80214320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
Isoform_30509_95	chr12	-	3711	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-270	-777	10	2	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGCTTGTTCCTTTG	NA	False	NA	-3	True	ATTAAA	-18	NA	80307135	80214318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
Isoform_30512_21	chr12	-	3549	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-301	-584	-21	-191	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTGCTTTTCAAAGAA	NA	False	NA	-23	True	ATTAAA	-14	NA	80307166	80214511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
Isoform_30521_138	chr12	-	3728	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	10	-4	10	4	multi-exon	TRUE	canonical	3	154	junction_2	44.8659113358906	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTGTTCCTTTGGC	NA	False	NA	-1	True	ATTAAA	-20	NA	80307135	80214316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
Isoform_30530_22	chr12	-	3758	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	-21	-3	-21	3	multi-exon	FALSE	canonical	3	154	junction_2	44.8659113358906	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGCTTGTTCCTTTGG	NA	False	NA	-2	True	ATTAAA	-19	NA	80307166	80214317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
Isoform_30547_5	chr12	-	5693	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	13	0	13	0	multi-exon	FALSE	canonical	3	23	junction_5	6.59071316323203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCCTTCCTCCTCTCT	NA	False	NA	-2	True	AATAAA	-16	NA	80483362	80382621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
Isoform_30549_7	chr12	-	5527	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	179	0	23	0	multi-exon	FALSE	canonical	3	23	junction_5	6.59071316323203	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCCTTCCTCCTCTCT	NA	False	NA	-2	True	AATAAA	-16	NA	80483196	80382621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
Isoform_30551_4	chr12	-	2801	9	NIC	ENSMUSG00000049106.8	novel	5706	9	NA	NA	11	-2559	combination_of_known_junctions	FALSE	canonical	3	3	junction_8	11.9993489406717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGGCCTGAAACGTGTC	NA	False	NA	NA	False	ATTAAA	-11	NA	80483208	80385180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80483137
Isoform_30558_639	chr12	-	847	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-13	-328	3	-7	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGAGTGGTTTTCTTA	NA	False	NA	-8	True	AATAAA	-24	NA	80690619	80680802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
Isoform_30561_4455	chr12	-	787	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	500	6	7	-6	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	4455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAGTGGTTTTCTTAT	NA	False	NA	-7	True	AATAAA	-25	NA	80690615	80680801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
Isoform_30569_60	chr12	-	665	4	FSM	ENSMUSG00000091803.8	ENSMUST00000110340.9	668	4	3	0	3	0	multi-exon	FALSE	canonical	3	188	junction_1	77.5127229699888	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	1001	False	NA	-46	True	AATAAA	-19	NA	81531881	81405799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81531670
Isoform_30570_16	chr12	-	848	6	FSM	ENSMUSG00000021139.18	ENSMUST00000164386.8	1043	6	28	167	0	-167	multi-exon	FALSE	canonical	3	129	junction_3	83.1899032335054	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTTCTCAGTGTTC	NA	False	NA	-47	True	AATAAA	-18	NA	81579651	81405800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
Isoform_30572_11	chr12	-	426	4	FSM	ENSMUSG00000091803.8	ENSMUST00000168463.8	431	4	4	1	1	-1	multi-exon	FALSE	canonical	3	31	junction_1	143.25501736414	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTATGCTTTTCAGTC	999	False	NA	-7	True	ATTAAA	-13	NA	81531883	81518867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81518946_81521360_81521424_81527704_81527777_81531670
Isoform_30573_5	chr12	-	605	6	NIC	ENSMUSG00000021139.18	novel	2284	6	NA	NA	1	-1493	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	113.684827483706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGTATGCTTTTCAG	NA	False	NA	-9	True	ATTAAA	-11	NA	81579650	81518869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_81518946_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
Isoform_30574_57	chr12	-	604	4	FSM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	13	1390	3	-1	multi-exon	FALSE	canonical	3	142	junction_1	95.530099968544	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTATGCTTTTCAGTC	1001	False	NA	-7	True	ATTAAA	-13	NA	81531881	81518867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81531670
Isoform_30575_36	chr12	-	788	6	FSM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	5	1491	0	-1491	multi-exon	FALSE	canonical	3	129	junction_3	88.6715286887511	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTATGCTTTTCAGTC	NA	False	NA	-7	True	ATTAAA	-13	NA	81579651	81518867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
Isoform_30577_117	chr12	-	3408	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	35	1212	4	-11	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTGCTTCAGTTGTT	NA	False	NA	-17	True	AATAGA	-1	NA	81579650	81545926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
Isoform_30588_7	chr12	-	3660	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	13	982	1	219	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATAGTTGGTAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	81579672	81545696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
Isoform_30590_14	chr12	-	3271	3	FSM	ENSMUSG00000090935.11	ENSMUST00000164431.2	3305	3	23	11	4	-11	multi-exon	FALSE	canonical	3	34	junction_2	56.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTGCTTCAGTTGTT	NA	False	NA	-17	True	AATAGA	-1	NA	81579650	81545926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81548941_81551317_81551414_81579489
Isoform_30593_279	chr12	-	1032	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	22	5	-21	-2	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATGCCTTTCCCTTGTC	NA	False	NA	-4	True	AATAAA	-20	NA	81641758	81620335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
Isoform_30595_9	chr12	-	1151	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	21	-113	21	113	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTCACTTGTTTGTAT	NA	False	NA	NA	False	AATATA	-26	NA	81641759	81620217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
Isoform_30599_59	chr12	-	3921	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	70	573	70	456	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCTCGTGTCCTAAG	NA	False	NA	0	True	NA	NA	NA	81827879	81768356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
Isoform_30600_8	chr12	-	4533	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	31	0	31	0	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGCCGTGAGGCAGTAG	NA	False	NA	NA	False	AGTAAA	-20	NA	81827918	81767783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
Isoform_30606_3	chr12	-	4109	12	NNC	ENSMUSG00000042724.9	novel	3303	12	NA	NA	10	455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5325538820971	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGTCTCGTGTCCTAA	NA	False	NA	-1	True	NA	NA	NA	81827939	81768357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_81769298_81770837_81771651_81772495_81772609_81772975_81773105_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
Isoform_30607_3	chr12	-	3979	12	NNC	ENSMUSG00000042724.9	novel	3303	12	NA	NA	-50	431	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5325538820971	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTGTCACCTTTGGTA	NA	False	NA	-1	True	NA	NA	NA	81827833	81768381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_81769298_81770837_81771651_81772495_81772609_81772975_81773105_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
Isoform_30609_43	chr12	-	3002	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	5	1029	5	217	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTCTCCGACTGCTTC	NA	False	NA	1	True	AATAAA	-24	NA	83643991	83594651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
Isoform_3061_27	chr10	-	4351	29	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-1	-27	combination_of_known_junctions	FALSE	canonical	3	19	junction_28	32.0305179732182	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTGCCTTTTGCT	5693	False	NA	-23	True	AATGAA	-30	NA	79911235	79892852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79911061
Isoform_30611_44	chr12	-	3931	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	110	-5	2	5	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGTATGGATCATGAC	NA	False	NA	NA	False	AAAAAG	-5	NA	83643886	83593617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
Isoform_30613_13	chr12	-	4346	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	-19	-291	-19	0	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACAGCTGTGTTGGCTCG	NA	False	NA	0	True	TATAAA	-16	NA	83644015	83593331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
Isoform_30614_8	chr12	-	2925	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-33	214	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	34.1123568895786	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCCCTCTCCGACTGC	NA	False	NA	-2	True	AATAAA	-21	NA	83643921	83594654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642093_83643770
Isoform_30615_5	chr12	-	3010	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9	215	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	34.1123568895786	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCCCTCTCCGACTGCT	NA	False	NA	-1	True	AATAAA	-22	NA	83644005	83594653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642093_83643770
Isoform_30616_5	chr12	-	3920	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	10	6	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	34.1123568895786	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCGTATGGATCATGACT	NA	False	NA	NA	False	AAAAAG	-6	NA	83643878	83593616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642093_83643770
Isoform_30619_3	chr12	-	3961	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-32	5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	34.1123568895786	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGTATGGATCATGAC	NA	False	NA	NA	False	AAAAAG	-5	NA	83643920	83593617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642093_83643770
Isoform_3062_274	chr10	-	4641	32	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-14	-28	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	18.0258226152743	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATATGTGCCTTTTGC	NA	False	NA	-24	True	AATGAA	-29	NA	79938546	79892853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
Isoform_30621_51	chr12	-	3697	13	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	24.4108354811729	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968678	83840809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
Isoform_30624_92	chr12	-	3596	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTATAGTTCTGTT	NA	False	NA	-4	True	NA	NA	NA	83968664	83840811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
Isoform_30626_17	chr12	-	3648	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	30.4074262351803	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTATAGTTCTGTT	NA	False	NA	-4	True	NA	NA	NA	83968664	83840811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
Isoform_30628_46	chr12	-	3562	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	26.5375206076227	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTTTATAGTTCTGT	NA	False	NA	-5	True	NA	NA	NA	83968664	83840812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
Isoform_3063_10	chr10	-	4624	32	NIC	ENSMUSG00000035673.11	novel	4227	32	NA	NA	-3	-27	combination_of_known_junctions	FALSE	canonical	1	5	junction_31	32.5969617398956	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTGCCTTTTGCT	NA	False	NA	-23	True	AATGAA	-30	NA	79938535	79892852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938450
Isoform_30630_18	chr12	-	3536	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	30.7224310332864	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968664	83840809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
Isoform_30631_24	chr12	-	3429	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	27.6550176279098	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTTTATAGTTCTGT	NA	False	NA	-5	True	NA	NA	NA	83968645	83840812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
Isoform_30633_6	chr12	-	3466	11	FSM	ENSMUSG00000021224.16	ENSMUST00000117217.8	3549	11	55	28	4	9	multi-exon	FALSE	canonical	3	42	junction_6	36.1696004954437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAAGGGCTGTTCTTATT	NA	False	NA	-28	True	AATAAA	-23	NA	83968653	83840835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
Isoform_30634_11	chr12	-	3430	10	NIC	ENSMUSG00000021224.16	novel	3549	11	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	34.4383507154451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTATAGTTCTGTT	NA	False	NA	-4	True	NA	NA	NA	83968678	83840811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
Isoform_30635_4	chr12	-	510	4	ISM	ENSMUSG00000021224.16	ENSMUST00000136848.8	567	6	12	23650	-4	1	5prime_fragment	FALSE	canonical	3	81	junction_2	23.3666428910958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACATCTC	NA	False	NA	NA	False	NA	NA	NA	83968645	83878600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_83878771_83888991_83889133_83923441_83923587_83968591
Isoform_30640_51	chr12	-	4215	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	-41	2982	-41	199	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGGACAGTGTTAAGG	NA	False	NA	-16	True	AATAAA	-21	NA	84240830	84199033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
Isoform_30642_23	chr12	-	4244	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	-74	2986	-74	195	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGCCAAGGACAGTGTT	NA	False	NA	-20	True	AATAAA	-17	NA	84240863	84199037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
Isoform_30643_33	chr12	-	7298	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	-39	-103	-39	1	multi-exon	TRUE	canonical	3	72	junction_9	16.3681601491025	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCATTGTTGAAT	NA	False	NA	-10	True	ATTAAA	-11	NA	84240828	84195948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
Isoform_30646_14	chr12	-	6849	13	FSM	ENSMUSG00000042507.16	ENSMUST00000046266.13	6848	13	-1	0	-1	0	multi-exon	FALSE	canonical	3	40	junction_12	22.3288241716596	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTCATTGTTGAA	NA	False	NA	-11	True	ATTAAA	-10	NA	84265656	84195949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84265548
Isoform_30650_7	chr12	-	3000	9	FSM	ENSMUSG00000021234.10	ENSMUST00000065536.9	3000	9	-7	7	-7	1	multi-exon	FALSE	canonical	1	2	junction_7	4.82020487116471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGATGTTTGAGATATT	398	False	NA	NA	False	AATAAA	-22	NA	84408614	84392089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84393184_84393560_84393710_84395050_84395151_84395379_84395545_84400573_84400702_84401483_84401822_84402697_84403252_84404301_84404625_84408465
Isoform_30651_5	chr12	-	2215	8	FSM	ENSMUSG00000021234.10	ENSMUST00000021659.2	3357	8	0	1142	0	33	multi-exon	FALSE	canonical	1	2	junction_6	4.96929346597888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTAAACCTCACAGATC	417	False	NA	NA	False	AATATA	-24	NA	84408595	84393232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84393710_84395050_84395151_84395379_84395545_84400573_84400702_84401483_84401822_84402697_84403252_84404301_84404625_84408465
Isoform_30656_40	chr12	-	4946	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	24	2	9	1	multi-exon	TRUE	canonical	3	43	junction_8	4.47014789713072	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTTTTCCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	84455779	84420650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
Isoform_30659_3	chr12	-	2010	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	-14	2976	-14	158	multi-exon	FALSE	canonical	3	43	junction_8	4.47014789713072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCTGTTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84455817	84423624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
Isoform_3066_28	chr10	-	4632	32	ISM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	1670	28	-2	-28	3prime_fragment	FALSE	canonical	3	16	junction_5	30.9623987325878	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATATGTGCCTTTTGC	NA	False	NA	-24	True	AATGAA	-29	NA	79938534	79892853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894567_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
Isoform_30661_12	chr12	-	4894	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	-12	-1	3	1	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTTTTCCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	84455800	84420650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
Isoform_30664_473	chr12	-	3385	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	-6	20	-5	-20	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACAGTACTGAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	84497783	84477510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
Isoform_30670_17	chr12	-	2201	16	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1233	2	combination_of_known_splicesites	FALSE	canonical	3	21	junction_14	54.7530212256213	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	84660928	84649304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659220_84659553_84659671_84660678
Isoform_30674_8	chr12	-	2061	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-19	-15	combination_of_known_splicesites	FALSE	canonical	3	21	junction_14	68.5911517161653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	84664163	84649441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659220_84659553_84659671_84660678_84660819_84664056
Isoform_30678_65	chr12	-	2206	16	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	3216	-122	1233	2	3prime_fragment	FALSE	canonical	3	177	junction_14	24.1887025971492	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	84660928	84649304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678
Isoform_3068_42	chr10	-	2396	18	ISM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	1670	5425	-2	-1	internal_fragment	FALSE	canonical	3	133	junction_10	12.4322384803871	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGGGTCTCCATTCCT	NA	False	NA	-1	True	AATAAA	-20	NA	79938534	79898250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
Isoform_30683_8	chr12	-	2558	19	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	57.1095168389669	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	84664110	84649304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84663895
Isoform_30685_260	chr12	-	2441	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-10	-122	-10	2	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	84664154	84649304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
Isoform_30687_9	chr12	-	2351	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-42	0	1	0	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAGAAAACTGGT	NA	False	NA	NA	False	NA	NA	NA	84664186	84649426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
Isoform_30689_30	chr12	-	2196	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-12	2	combination_of_known_splicesites	FALSE	canonical	3	30	junction_16	51.6547659345195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	84664156	84649304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84664056
Isoform_30692_7	chr12	-	2091	15	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1229	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_14	59.0086901244561	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84660932	84649306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84660678
Isoform_30694_7	chr12	-	2332	18	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_14	59.8794059138462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84664163	84649305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84660678_84660819_84661850_84661979_84662099_84662219_84664056
Isoform_30703_918	chr12	-	1158	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	212	1929	-26	1	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGGTTTTGTTTTTT	NA	False	NA	-26	True	ATTAAA	-18	NA	84819714	84803264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_30705_1081	chr12	-	1116	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	254	1929	16	1	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGGTTTTGTTTTTT	NA	False	NA	-26	True	ATTAAA	-18	NA	84819672	84803264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_30706_31	chr12	-	3085	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	212	2	-26	-2	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATCCTGGATGCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	84819714	84801337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_30707_57	chr12	-	3043	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	254	2	16	-2	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATCCTGGATGCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	84819672	84801337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_30708_209	chr12	-	1203	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	254	1842	16	88	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTGTGTGTTCAGT	NA	False	NA	-7	True	CATAAA	-14	NA	84819672	84803177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_30709_174	chr12	-	1250	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	212	1837	-26	93	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTGTGTTCAGTCTGTG	NA	False	NA	-2	True	CATAAA	-19	NA	84819714	84803172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_3071_8	chr10	-	2690	4	FSM	ENSMUSG00000035673.11	ENSMUST00000217683.2	2601	4	-79	-10	-24	10	multi-exon	FALSE	canonical	3	148	junction_1	5.55777733351102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCAGTCTGTCCCTTCC	NA	False	NA	NA	False	AATAGA	-20	NA	79938556	79916233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79918561_79920074_79920149_79922090_79922267_79938443
Isoform_30710_56	chr12	-	1318	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	139	1842	-99	88	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTGTGTGTTCAGT	NA	False	NA	-7	True	CATAAA	-14	NA	84819787	84803177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_30711_219	chr12	-	1231	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	139	1929	-99	1	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGGTTTTGTTTTTT	NA	False	NA	-26	True	ATTAAA	-18	NA	84819787	84803264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_3072_17	chr10	-	3188	11	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	10.5380263806844	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGCTCTGGGTTT	9086	False	NA	-8	True	CATAAA	-11	NA	79975187	79966386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972496_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_30720_3	chr12	-	4180	20	NNC	ENSMUSG00000002020.16	novel	6769	36	NA	NA	-2639	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.42448269605916	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGTGCTTAGTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	84848876	84829985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_84831170_84831527_84831678_84831977_84832260_84832501_84832670_84832747_84832886_84833129_84833259_84834139_84834224_84834677_84834870_84835857_84836002_84836531_84836658_84837015_84837148_84837768_84837892_84838370_84838497_84838595_84838719_84839730_84839857_84840392_84840519_84840717_84840841_84841814_84841935_84846145_84846266_84848412
Isoform_30721_3	chr12	-	2816	4	ISM	ENSMUSG00000042350.14	ENSMUST00000163231.8	5262	19	46844	4	19398	-2	3prime_fragment	FALSE	canonical	3	85	junction_2	9.46337971105226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGCTAAATGAGTGTT	95	False	NA	NA	False	AATAAA	-14	NA	84970754	84964925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633
Isoform_30724_99	chr12	-	5406	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	39	1	-5	-1	multi-exon	TRUE	canonical	0	0	junction_19	22.9818668733885	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTAAATGAGTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	85017635	84964924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
Isoform_30726_3	chr12	-	2747	11	ISM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	32	11257	-12	4912	5prime_fragment	FALSE	canonical	0	0	junction_10	28.8757683880447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-14	NA	85017642	84976180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
Isoform_30727_3	chr12	-	2804	4	ISM	ENSMUSG00000019235.10	ENSMUST00000222232.2	2034	5	-480	42	-480	-36	intron_retention	FALSE	canonical	3	141	junction_2	8.25967446224258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTCTCCTGTGTCA	611	False	NA	-45	True	AATAAA	-14	NA	85187243	85182449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426
Isoform_30728_8	chr12	-	2710	4	ISM	ENSMUSG00000019235.10	ENSMUST00000222232.2	2034	5	-476	132	-476	-126	intron_retention	FALSE	canonical	3	141	junction_2	8.25967446224258	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	615	False	NA	-19	True	AATAAA	-10	NA	85187239	85182539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426
Isoform_30729_6	chr12	-	2501	5	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10806	384	-469	1	intron_retention	FALSE	canonical	3	138	junction_4	9.5655632348545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCAGTTCTTCTCAGGT	622	False	NA	-2	True	NA	NA	NA	85187232	85182406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851
Isoform_3073_37	chr10	-	3163	11	FSM	ENSMUSG00000035640.19	ENSMUST00000147778.9	3175	11	12	0	10	0	multi-exon	FALSE	canonical	3	10	junction_6	10.1788997440784	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9086	False	NA	-6	True	CATAAA	-13	NA	79975187	79966384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_30730_5	chr12	-	2079	6	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-213	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.2109624570144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	878	False	NA	-19	True	AATAAA	-10	NA	85186976	85182539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851
Isoform_30731_3	chr12	-	2576	7	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-213	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.6721695970596	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTGCATCATTAATATA	878	False	NA	0	True	AATAAA	-19	NA	85186976	85182020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85182098_85182119_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851
Isoform_30733_27	chr12	-	2165	8	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-476	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.6306921729616	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGCATCATTAATATAG	615	False	NA	1	True	AATAAA	-20	NA	85187239	85182019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85182098_85182119_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
Isoform_30734_55	chr12	-	1792	6	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10797	427	-478	-36	3prime_fragment	FALSE	canonical	3	114	junction_5	16.4073154415949	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTCTCCTGTGTCA	613	False	NA	-45	True	AATAAA	-14	NA	85187241	85182449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
Isoform_30735_84	chr12	-	1667	7	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-476	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.9989898897142	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	615	False	NA	-19	True	AATAAA	-10	NA	85187239	85182539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
Isoform_30736_20	chr12	-	1841	6	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10806	369	-469	16	3prime_fragment	FALSE	canonical	3	114	junction_5	16.4073154415949	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTTGTTTTCCACTCT	622	False	NA	13	True	NA	NA	NA	85187232	85182391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
Isoform_30738_10	chr12	-	2321	12	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-4	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.5476529658468	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	NA	False	NA	-19	True	AATAAA	-10	NA	85198028	85182539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117_85187251_85187602_85187651_85193636_85193730_85194519_85194645_85196397_85196683_85197936
Isoform_30739_14	chr12	-	2442	11	FSM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	14	425	0	-34	multi-exon	FALSE	canonical	1	2	junction_6	69.4942443659905	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTCTCCTGTGTCAGA	NA	False	NA	-43	True	AATAAA	-16	NA	85198024	85182447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117_85187251_85187602_85187651_85193636_85193730_85194519_85194645_85196397_85196683_85197936
Isoform_3074_3	chr10	-	3113	10	FSM	ENSMUSG00000035640.19	ENSMUST00000105369.8	3121	10	8	0	6	0	multi-exon	FALSE	canonical	2	9	junction_6	10.6817023658263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9082	False	NA	-6	True	CATAAA	-13	NA	79975191	79966384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_30740_3	chr12	-	1856	7	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-126	-127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.5159853718713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGAAGCCAGTGTGTTT	965	False	NA	-20	True	AATAAA	-9	NA	85186889	85182540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85186577
Isoform_30741_3	chr12	-	1957	8	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-486	-123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.3043454250638	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCAGTGTGTTTAAGA	605	False	NA	-16	True	AATAAA	-13	NA	85187249	85182536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85186577_85186855_85187117
Isoform_30742_3	chr12	-	2450	9	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-486	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	73.4633199290639	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGCATCATTAATAT	605	False	NA	-1	True	AATAAA	-18	NA	85187249	85182021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85182098_85182119_85183084_85183116_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85186577_85186855_85187117
Isoform_30743_3	chr12	-	2345	6	NNC	ENSMUSG00000019235.10	novel	2034	5	NA	NA	-476	-126	intron_retention	FALSE	canonical	0	0	junction_1	68.4064324460792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	615	False	NA	-19	True	AATAAA	-10	NA	85187239	85182539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851
Isoform_30744_4	chr12	-	2084	6	NNC	ENSMUSG00000019235.10	novel	2034	5	NA	NA	-213	-124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.4064324460792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCCAGTGTGTTTAAG	878	False	NA	-17	True	AATAAA	-12	NA	85186976	85182537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851
Isoform_30745_3	chr12	-	2162	8	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-470	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	67.8759372468834	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGCATCATTAATATAG	621	False	NA	1	True	AATAAA	-20	NA	85187233	85182019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85182098_85182119_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851_85186443_85187117
Isoform_30746_18	chr12	-	1701	6	NIC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-474	-126	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	48.0441463656084	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	617	False	NA	-19	True	AATAAA	-10	NA	85187237	85182539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851_85186443_85187117
Isoform_30747_7	chr12	-	1782	7	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-452	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	62.744632351213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTTCTTCTCAGGTGT	639	False	NA	0	True	NA	NA	NA	85187215	85182404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85183085_85183116_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851_85186443_85187117
Isoform_30748_3	chr12	-	2445	11	NIC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	0	-34	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	66.9776828503346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTCTCCTGTGTCAGA	NA	False	NA	-43	True	AATAAA	-16	NA	85198024	85182447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851_85186443_85187117_85187251_85187602_85187651_85193636_85193730_85194519_85194645_85196397_85196683_85197936
Isoform_3075_11	chr10	-	3357	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	16	junction_9	8.743251365736	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9087	False	NA	-6	True	CATAAA	-13	NA	79975186	79966384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_30750_33	chr12	-	5549	13	FSM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	1	-851	1	0	multi-exon	FALSE	canonical	3	35	junction_11	18.8126730335342	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	85317372	85281302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
Isoform_30753_3	chr12	-	5746	14	Fusion	ENSMUSG00000008822.16_ENSMUSG00000021245.16	novel	4699	13	NA	NA	2	49	multi-exon	FALSE	canonical	3	14	junction_12	87.0928906262339	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATTATATCAGAATGCA	4310	False	NA	NA	False	TATAAA	-13	NA	85327190	85281244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85326764_85326857_85327083
Isoform_30754_20	chr12	-	5500	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	-37	0	-37	0	multi-exon	FALSE	canonical	3	46	junction_10	14.4554030620371	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGTTTTTGAAAATG	NA	False	NA	NA	False	AATAAA	-15	NA	85317410	85281293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
Isoform_30755_40	chr12	-	5462	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	1	0	1	0	multi-exon	FALSE	canonical	3	46	junction_10	14.4554030620371	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGTTTTTGAAAATG	NA	False	NA	NA	False	AATAAA	-15	NA	85317372	85281293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
Isoform_30757_7	chr12	-	5568	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	-51	-54	-51	54	multi-exon	FALSE	canonical	3	46	junction_10	14.4554030620371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATGCATCATT	NA	False	NA	NA	False	TATAAA	-18	NA	85317424	85281239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
Isoform_30758_8	chr12	-	5516	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	2	-55	2	55	multi-exon	FALSE	canonical	3	46	junction_10	14.4554030620371	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCAGAATGCATCATTT	NA	False	NA	NA	False	TATAAA	-19	NA	85317371	85281238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
Isoform_30759_8	chr12	-	5621	13	Fusion	ENSMUSG00000008822.16_ENSMUSG00000021245.16	novel	5420	12	NA	NA	-10	0	multi-exon	FALSE	canonical	3	14	junction_11	88.6954840388669	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	4281	False	NA	NA	False	AATAAA	-6	NA	85327219	85281302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85326764_85326857_85327083
Isoform_3076_9	chr10	-	3939	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	12	-2	intron_retention	FALSE	canonical	2	8	junction_5	10.4774890970011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGCTCTGGGTTT	9088	False	NA	-8	True	CATAAA	-11	NA	79975185	79966386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972496_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_30760_4	chr12	-	5517	12	NNC	ENSMUSG00000021245.16	novel	5420	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	24.7105558465999	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	85317371	85281302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317247
Isoform_30763_129	chr12	-	622	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	20	6	3	5	multi-exon	FALSE	canonical	3	386	junction_2	28.5	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTACATTGCTTCCCCCC	4311	False	NA	-6	True	AATAAA	-18	NA	85327189	85319177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85319602_85326764_85326857_85327083
Isoform_3077_9	chr10	-	3912	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	12	-2	intron_retention	FALSE	canonical	3	10	junction_5	10.0492613818622	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGCTCTGGGTTT	9088	False	NA	-8	True	CATAAA	-11	NA	79975185	79966386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_30773_169	chr12	-	5384	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	2	0	2	0	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	7959	False	NA	-3	True	AATAAA	-15	NA	85386134	85346287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
Isoform_30774_7	chr12	-	3437	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	-21	1970	-21	-1970	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCACTGGTAGCAGCTCA	7936	False	NA	NA	False	NA	NA	NA	85386157	85348257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
Isoform_30775_6	chr12	-	3551	20	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	-22	5186	-22	-5186	5prime_fragment	FALSE	canonical	3	74	junction_14	9.76170367946916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTCATATTTTAATA	7935	False	NA	NA	False	NA	NA	NA	85386158	85351473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
Isoform_30777_227	chr12	-	3505	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	150	-2173	-7	-1	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGGTGTATTTGTCTG	8614	False	NA	-2	True	AATAAA	-15	NA	85421471	85387388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
Isoform_30780_1536	chr12	-	1335	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	150	-3	-7	3	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTGTGTATGTGTGTT	8614	False	NA	-2	True	ATTAAA	-23	NA	85421471	85389558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
Isoform_30787_59	chr12	-	1524	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-355	0	-327	0	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871651	85862221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
Isoform_30788_574	chr12	-	1192	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-22	-1	0	1	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTGTGTACTTTGGCC	NA	False	NA	-3	True	AATAAA	-22	NA	85871318	85862220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
Isoform_30789_23	chr12	-	1557	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-387	-1	-359	1	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTGTGTACTTTGGCC	NA	False	NA	-3	True	AATAAA	-22	NA	85871683	85862220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
Isoform_3079_15	chr10	-	994	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	-9	3	-9	-3	multi-exon	FALSE	canonical	3	22	junction_3	3.91918358845308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGGTTGGTTGGCAGT	9240	False	NA	NA	False	AATAAA	-15	NA	80096855	80093987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
Isoform_30796_148	chr12	-	3820	10	FSM	ENSMUSG00000021257.15	ENSMUST00000021682.9	3850	10	30	0	30	0	multi-exon	FALSE	canonical	3	66	junction_1	10.9341463112378	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	0	True	AATAAA	-19	NA	86773204	86747275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
Isoform_30799_3	chr12	-	3424	9	NIC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_5	28.4052701976235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	0	True	AATAAA	-19	NA	86773242	86747275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86768084_86768155_86768614_86768842_86769618_86770195_86773103
Isoform_308_178	SIRV10003	+	9969	1	FSM	SIRV10003A	SIRV10003	9970	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	9970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV10003_+_0_10000
Isoform_3080_15	chr10	-	896	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	83	9	-11	4	multi-exon	FALSE	canonical	3	22	junction_3	3.91918358845308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGACTAGTGGGTTGGTT	9332	False	NA	NA	False	AATAAA	-9	NA	80096763	80093993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
Isoform_30800_4	chr12	-	6225	9	NIC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	12	-1	intron_retention	FALSE	canonical	3	66	junction_1	10.4642247682282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGTTAGCCTTGTTATT	NA	False	NA	-1	True	AATAAA	-18	NA	86773222	86747276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
Isoform_30801_92	chr12	-	4632	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	432	0	4	0	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTTGTGCTTGATT	6081	False	NA	NA	False	AATAAA	-22	NA	87194244	87153634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
Isoform_30806_12	chr12	-	5116	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	-57	5	9	-5	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACATTGTTCTTGTGCT	5592	False	NA	NA	False	AATAAA	-17	NA	87194733	87153639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
Isoform_3081_3	chr10	-	799	6	NNC	ENSMUSG00000020150.14	novel	988	6	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	11.4821600755259	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGACTAGTGGGTTGGTT	9231	False	NA	NA	False	AATAAA	-9	NA	80096864	80093993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096752
Isoform_30810_13	chr12	-	7324	6	FSM	ENSMUSG00000034111.7	ENSMUST00000037418.7	7409	6	82	3	82	-3	multi-exon	FALSE	canonical	3	17	junction_3	4.87442304278158	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTGAGTTCTTTCTT	7827	False	NA	1	True	AATAAA	-20	NA	87247146	87213013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
Isoform_30811_3	chr12	-	7405	6	FSM	ENSMUSG00000034111.7	ENSMUST00000037418.7	7409	6	-1	5	-1	-5	multi-exon	FALSE	canonical	3	17	junction_3	4.87442304278158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTGAGTTCTTTC	7744	False	NA	-1	True	AATAAA	-18	NA	87247229	87213015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
Isoform_30813_7	chr12	-	734	4	NNC	ENSMUSG00000072919.5	novel	1101	6	NA	NA	8410	61	at_least_one_novel_splicesite	TRUE	canonical	3	41	junction_2	1.69967317119759	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGTATTCTTGGGTG	NA	False	NA	-9	True	AATAAA	-19	NA	87271920	87267967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_87268219_87269818_87270042_87270931_87271084_87271812
Isoform_30816_156	chr12	-	2499	20	FSM	ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	23	2	20	0	multi-exon	FALSE	canonical	3	87	junction_1	8.24352343784865	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTCTTCCCCATCTGGT	NA	False	NA	-12	True	AATAAA	-19	NA	87313007	87285648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
Isoform_30818_14	chr12	-	3217	20	FSM	ENSMUSG00000072919.5_ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	14	-707	11	702	multi-exon	FALSE	canonical	3	87	junction_1	8.24352343784865	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAGCCTCATACTTGAT	NA	False	NA	NA	False	TTTAAA	-32	NA	87313016	87284939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
Isoform_3082_234	chr10	-	1181	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	13	455	13	-455	multi-exon	FALSE	canonical	3	349	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTTCTCCCTTAAGCC	8730	False	NA	-17	True	ATTAAA	-17	NA	80156358	80154542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80155382_80156016
Isoform_30821_311	chr12	-	2544	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-22	4	-22	-4	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTTTGATAAAGGATTT	7647	False	NA	-3	True	AATAAA	-17	NA	87346501	87325415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_30822_6	chr12	-	2750	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-230	6	-230	-6	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAGTTTGATAAAGGAT	7439	False	NA	-5	True	AATAAA	-15	NA	87346709	87325417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_30823_25	chr12	-	2652	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-132	6	-132	-6	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAGTTTGATAAAGGAT	7537	False	NA	-5	True	AATAAA	-15	NA	87346611	87325417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_30828_10	chr12	-	2687	6	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-58	-7	combination_of_known_junctions	TRUE	canonical	3	13	junction_2	30.7310917476096	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTTTGATAAAGGA	7611	False	NA	-6	True	AATAAA	-14	NA	87346537	87325418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_87326977_87329073_87329268_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_30829_10	chr12	-	2880	5	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-96	-4	intron_retention	FALSE	canonical	3	77	junction_1	7.44983221287567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTTTGATAAAGGATTT	7573	False	NA	-3	True	AATAAA	-17	NA	87346575	87325415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_87326977_87329073_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_3083_94	chr10	-	1636	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	13	0	13	0	multi-exon	FALSE	canonical	3	349	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGGCTCGCTTTATTA	8730	False	NA	NA	False	GATAAA	-19	NA	80156358	80154087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80155382_80156016
Isoform_30830_10	chr12	-	2806	5	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-24	-6	intron_retention	FALSE	canonical	3	77	junction_1	7.44983221287567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAGTTTGATAAAGGAT	7645	False	NA	-5	True	AATAAA	-15	NA	87346503	87325417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_87326977_87329073_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_30832_13	chr12	-	2685	7	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-74	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39.8444893722248	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAGTTTGATAAAGGAT	7595	False	NA	-5	True	AATAAA	-15	NA	87346553	87325417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_87326977_87328088_87328180_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_30833_8	chr12	-	961	2	ISM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-45	7716	-45	-3934	5prime_fragment	FALSE	canonical	3	97	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGCTTGGTTTGTTT	7624	False	NA	NA	False	AAGAAA	-43	NA	87346524	87333127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_87333912_87346347
Isoform_3084_7	chr10	-	1259	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	-65	455	-65	-455	multi-exon	FALSE	canonical	3	349	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTTCTCCCTTAAGCC	8652	False	NA	-17	True	ATTAAA	-17	NA	80156436	80154542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80155382_80156016
Isoform_30840_545	chr12	-	2038	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	96	4576	-18	5	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTACTTGTGAAATCAC	8792	False	NA	-6	True	ATTAAA	-19	NA	87435033	87356407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
Isoform_30844_54	chr12	-	2020	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	33	4657	33	-76	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTCTGTTTGCTAAG	8729	False	NA	-3	True	AGTAAA	-20	NA	87435096	87356488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
Isoform_30845_19	chr12	-	2151	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	-14	4573	-14	8	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTTGTGAAATCACGCT	8682	False	NA	-3	True	ATTAAA	-22	NA	87435143	87356404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
Isoform_30849_12	chr12	-	3613	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	101	2996	-13	16	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTTGGTGCAAAGTTTA	8797	False	NA	NA	False	ATTAAA	-35	NA	87435028	87354827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
Isoform_3085_3	chr10	-	1098	8	NNC	ENSMUSG00000043822.19	novel	989	8	NA	NA	-61	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	6.31809839642742	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTCCCCTCAGTAT	NA	False	NA	NA	False	AATAGA	-17	NA	80184307	80178571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181585_80183390_80183460_80184189
Isoform_30854_32	chr12	-	2090	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGACCTGTATCTGT	NA	False	NA	-60	True	AATAAA	-15	NA	87490601	87474853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
Isoform_30855_26	chr12	-	4009	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490605	87472938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
Isoform_30858_22	chr12	-	2021	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	-9	7	1	-4	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGACCTGTATCTGT	NA	False	NA	-60	True	AATAAA	-15	NA	87490605	87474853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
Isoform_30859_6	chr12	-	3932	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	-5	-1908	2	0	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490601	87472938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
Isoform_30860_12	chr12	-	3794	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162247.8	1883	6	-3	-1908	2	0	multi-exon	FALSE	canonical	3	134	junction_2	71.1983145867934	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490601	87472938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87490411
Isoform_30861_32	chr12	-	1883	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162247.8	1883	6	-3	3	2	0	multi-exon	FALSE	canonical	3	134	junction_2	71.1983145867934	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490601	87474849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87490411
Isoform_30863_17	chr12	-	1806	4	NNC	ENSMUSG00000079036.11	novel	1883	6	NA	NA	743	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	115.494107593803	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87484586	87474849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_87476041_87478169_87478309_87480888_87480980_87484201
Isoform_30866_23	chr12	-	2153	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	1	0	1	0	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490605	87474849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
Isoform_30869_8	chr12	-	3991	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	109.640954432588	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490605	87472938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
Isoform_3087_66	chr10	-	3108	3	NIC	ENSMUSG00000048696.12	novel	3266	2	NA	NA	-19	-1	combination_of_known_junctions	FALSE	non_canonical	2	28	junction_1	22	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTGGCGTTCGCGTGGT	NA	False	NA	-1	True	AATAAA	-19	NA	80223512	80216189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80216897_80217072_80218456_80222494
Isoform_30870_9	chr12	-	2081	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	109.640954432588	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490606	87474849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
Isoform_30871_152	chr12	-	1942	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	4	1911	1	0	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490605	87474849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
Isoform_30873_52	chr12	-	3853	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	4	0	1	0	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490605	87472938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
Isoform_30875_17	chr12	-	1857	4	NNC	ENSMUSG00000079036.11	novel	1042	5	NA	NA	743	-4	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	112.570965271789	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGACCTGTATCTGT	NA	False	NA	-60	True	AATAAA	-15	NA	87484586	87474853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_87476041_87478169_87478364_87480888_87480980_87484201
Isoform_30879_5	chr12	-	4227	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	77	junction_5	88.6052418815551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490605	87474849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
Isoform_30895_1188	chr12	-	2225	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	-3	10	-3	-10	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCAATTCTGTTT	NA	False	NA	-12	True	AATAAA	-10	NA	87519047	87496689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
Isoform_30899_41	chr12	-	2386	14	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-4931	-9	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	244.437985988436	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCTCAATTCTGTTTA	NA	False	NA	-11	True	AATAAA	-11	NA	87523975	87496688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87523785
Isoform_30907_11	chr12	-	1028	2	FSM	ENSMUSG00000093847.3	ENSMUST00000218054.3	1856	2	-2	830	-2	95	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTTGTTAATGC	NA	False	NA	NA	False	AATAAA	-14	NA	88290798	88287721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_88288562_88290610
Isoform_30908_75	chr12	-	4776	26	FSM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	20	11	20	-11	multi-exon	FALSE	canonical	3	41	junction_10	9.02405673741029	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATAAGAACATTGAATG	6172	False	NA	-16	True	AATAAA	-8	NA	91351163	90965276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
Isoform_3091_96	chr10	-	3283	2	FSM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	-19	2	-19	-2	multi-exon	FALSE	canonical	3	72	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCTGGCGTTCGCGTGG	NA	False	NA	-2	True	AATAAA	-18	NA	80223512	80216190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80218456_80222494
Isoform_30911_4	chr12	-	4731	25	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-6	5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_21	14.1507263260779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGCGTCTGTTAAAAT	6146	False	NA	0	True	AATAAA	-24	NA	91351189	90965260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91333116_91333279_91336835_91336971_91348421_91348563_91351007
Isoform_30913_7	chr12	-	4142	25	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	20	6	combination_of_known_splicesites	TRUE	canonical	2	6	junction_10	13.6808234604338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGCGTCTGTTAAAATA	6172	False	NA	1	True	AATAAA	-25	NA	91351163	90965259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
Isoform_30915_3	chr12	-	1275	11	ISM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	-17	300554	-17	-9653	5prime_fragment	FALSE	canonical	3	46	junction_8	7.98999374217527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGAGGACGTAATAAAAA	6135	False	NA	NA	False	AAGAAA	-21	NA	91351200	91265819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
Isoform_30921_5	chr12	-	6014	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	50	0	50	0	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTATTTTGCAGTTT	-2	True	NA	0	True	AATAAA	-23	NA	91556733	91522035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
Isoform_30923_3	chr12	-	6096	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	-33	1	-33	-1	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTATTTTGCAGTT	1212	False	NA	-1	True	AATAAA	-22	NA	91556816	91522036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
Isoform_30924_3	chr12	-	3129	3	ISM	ENSMUSG00000020961.16	ENSMUST00000052969.15	9896	7	137788	5288	65326	3246	3prime_fragment	FALSE	canonical	3	26	junction_2	3	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGACTCGAGCTTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	91615422	91605070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_91606580_91608494_91608698_91614005
Isoform_30926_3	chr12	-	2962	3	ISM	ENSMUSG00000020961.16	ENSMUST00000052969.15	9896	7	137954	5289	65492	3245	3prime_fragment	FALSE	canonical	3	26	junction_2	3	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGACTCGAGCTTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	91615256	91605071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_91606580_91608494_91608698_91614005
Isoform_30927_16	chr12	-	2749	4	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	27832	2256	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	9.7410927974683	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCATTTCTCTGGGCCT	NA	False	NA	-2	True	TATAAA	-17	NA	91652916	91606060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91652728
Isoform_30929_7	chr12	-	3448	7	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	0	2257	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	11.1753697428268	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATTTCTCTGGGCCTG	143	False	NA	-1	True	TATAAA	-18	NA	91745911	91606059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91680700_91680899_91707244_91707521_91710379_91710653_91745772
Isoform_30933_206	chr12	-	3987	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	17	2296	0	304	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGTACATTTGTGTG	NA	False	NA	-10	True	NA	NA	NA	91815914	91775112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_30938_138	chr12	-	6269	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	29	2	1	-2	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTGGGCGTGTGCC	NA	False	NA	-26	True	AATAAA	-16	NA	91815902	91772818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_30943_53	chr12	-	3838	21	FSM	ENSMUSG00000020964.15	ENSMUST00000167466.2	5544	21	-11	1717	0	305	multi-exon	FALSE	canonical	3	89	junction_17	69.9646339231472	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGTACATTTGTGTGT	NA	False	NA	-9	True	NA	NA	NA	91815914	91775111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799978_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_30946_47	chr12	-	6120	21	FSM	ENSMUSG00000020964.15	ENSMUST00000167466.2	5544	21	1	-577	1	-1	multi-exon	FALSE	canonical	3	89	junction_17	69.9646339231472	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTGGGCGTGTGCCA	NA	False	NA	-25	True	AATAAA	-17	NA	91815902	91772817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799978_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_30948_12	chr12	-	2423	19	ISM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	27	7499	0	1962	5prime_fragment	FALSE	canonical	3	285	junction_15	40.6007738781685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTTTTCCTGATCTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	91815904	91780315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_3095_46	chr10	-	1255	5	ISM	ENSMUSG00000035478.15	ENSMUST00000105347.2	914	6	333	-440	-60	-3	3prime_fragment	FALSE	canonical	3	1097	junction_1	94.3328548279972	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80231220	80228375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897
Isoform_30952_7	chr12	-	4581	17	NIC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	249	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	9.17686459255012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGAGAATTTGCATT	NA	False	NA	NA	False	NA	NA	NA	98225308	98168554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98224232
Isoform_30954_62	chr12	-	3721	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	108	3	-4	-3	multi-exon	FALSE	canonical	3	22	junction_3	6.15648793956424	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTGAGAATTTGCAT	NA	False	NA	NA	False	NA	NA	NA	98225610	98168555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
Isoform_30955_8	chr12	-	3806	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	24	2	24	-2	multi-exon	FALSE	canonical	3	22	junction_3	6.15648793956424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGAGAATTTGCATT	NA	False	NA	NA	False	NA	NA	NA	98225694	98168554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
Isoform_30956_11	chr12	-	2457	14	ISM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	110	9918	-2	-4759	5prime_fragment	FALSE	canonical	3	25	junction_5	5.73992557113158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAGAAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	98225608	98178470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
Isoform_30958_3	chr12	-	5622	18	NNC	ENSMUSG00000021009.16	novel	5562	19	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	10.9440224002685	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGTTCCTGTTGCAA	NA	False	NA	1	True	ATTAAA	-16	NA	98700195	98642999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677156_98681282_98681453_98699732
Isoform_30959_7	chr12	-	5696	19	FSM	ENSMUSG00000021009.16	ENSMUST00000085116.4	5696	19	1	-1	1	0	multi-exon	FALSE	canonical	3	8	junction_18	9.45636502606434	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGTTCCTGTTGCAA	NA	False	NA	1	True	ATTAAA	-16	NA	98700903	98642999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98700728
Isoform_30960_32	chr12	-	5761	19	FSM	ENSMUSG00000021009.16	ENSMUST00000170188.8	5562	19	-200	1	-200	0	multi-exon	FALSE	canonical	3	24	junction_6	7.37467304150739	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCGTGTTCCTGTTGCA	NA	False	NA	0	True	ATTAAA	-15	NA	98703864	98643000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98703623
Isoform_30962_11	chr12	-	7529	42	NIC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	38	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_9	7.29508892523777	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCGCATCAAGGAAGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	98867705	98755407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98771725_98771747_98776777_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
Isoform_30963_6	chr12	-	5260	33	NIC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	39	-335	combination_of_known_junctions	FALSE	canonical	3	20	junction_30	6.85843174038351	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATCTCTTTAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	98867704	98767034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_98767371_98768542_98768717_98771725_98771747_98776777_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
Isoform_30964_5	chr12	-	4375	25	ISM	ENSMUSG00000051166.11	ENSMUST00000223282.2	7595	44	0	37945	0	-11121	5prime_fragment	FALSE	canonical	3	20	junction_22	6.45927412502537	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTTCATCAATATAATT	NA	False	NA	NA	False	AATAAA	-21	NA	98867743	98793348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
Isoform_30965_8	chr12	-	2804	10	ISM	ENSMUSG00000051166.11	ENSMUST00000223282.2	7595	44	39	73222	39	-46398	5prime_fragment	FALSE	canonical	3	20	junction_7	6.39444203108363	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTTGCTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	98867704	98828625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
Isoform_30976_22	chr12	-	3814	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	54	-986	54	986	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99359277	99160366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
Isoform_30977_11	chr12	-	3852	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	15	-985	15	985	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99359316	99160367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
Isoform_3098_85	chr10	-	1578	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	83	1	-45	-1	multi-exon	FALSE	canonical	3	303	junction_6	355.847657791302	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235301	80228373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
Isoform_30984_5	chr12	-	2084	6	NIC	ENSMUSG00000021176.7	novel	2068	6	NA	NA	-25	-5	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	27.0673234731475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATCATATTTATGGT	NA	False	NA	-11	True	ATTAAA	-18	NA	99849726	99683795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844658_99849020_99849117_99849540
Isoform_30985_59	chr12	-	2073	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	-7	2	-7	-2	multi-exon	FALSE	canonical	3	69	junction_2	7.87400787401181	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCATATTTATGGTATG	NA	False	NA	-8	True	ATTAAA	-21	NA	99849708	99683792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
Isoform_3099_217	chr10	-	1550	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	111	1	-17	-1	multi-exon	FALSE	canonical	3	303	junction_6	355.847657791302	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235273	80228373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
Isoform_30991_10	chr12	-	3504	7	NNC	ENSMUSG00000021176.7	novel	1122	7	NA	NA	30	1437	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.3063066410644	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGTTGCTTGTTGTCA	NA	False	NA	NA	False	NA	NA	NA	99849732	99682353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_99683461_99683492_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
Isoform_30992_3	chr12	-	2011	5	NIC	ENSMUSG00000021176.7	novel	2068	6	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	32.7108544675922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATATTTATGGTATGTA	NA	False	NA	-6	True	ATTAAA	-23	NA	99849690	99683790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_99685363_99820868_99820960_99821796_99821899_99849020_99849117_99849540
Isoform_30999_187	chr12	-	3709	14	FSM	ENSMUSG00000021179.9	ENSMUST00000021596.9	3718	14	9	0	9	0	multi-exon	FALSE	canonical	2	41	junction_5	13.3828469211889	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8565	False	NA	-5	True	GATAAA	-15	NA	100125898	100091710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
Isoform_31000_8	chr12	-	3903	14	FSM	ENSMUSG00000021179.9	ENSMUST00000021596.9	3718	14	-185	0	-180	0	multi-exon	FALSE	canonical	2	41	junction_5	13.3828469211889	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8371	False	NA	-5	True	GATAAA	-15	NA	100126092	100091710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
Isoform_31001_5	chr12	-	3918	15	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-1533	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	22.0046377300935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	7018	False	NA	-5	True	GATAAA	-15	NA	100127445	100091710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798_100125990_100127327
Isoform_31002_59	chr12	-	3688	14	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	15	0	combination_of_known_junctions	TRUE	canonical	2	17	junction_12	19.2473774437334	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8571	False	NA	-5	True	GATAAA	-15	NA	100125892	100091710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100125798
Isoform_31003_3	chr12	-	3557	13	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	21.4747914231237	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGTGCAGCTTCTT	8555	False	NA	-8	True	GATAAA	-12	NA	100125908	100091713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100116075_100116310_100117469_100117594_100125798
Isoform_31011_451	chr12	-	3440	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	5	1	1	-1	multi-exon	FALSE	canonical	3	208	junction_10	15.649378488982	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCTTTTGTCTTTC	NA	False	NA	-2	True	AATAAA	-20	NA	100487080	100267029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
Isoform_31013_51	chr12	-	3505	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	-60	1	-60	-1	multi-exon	FALSE	canonical	3	208	junction_10	15.649378488982	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCTTTTGTCTTTC	NA	False	NA	-2	True	AATAAA	-20	NA	100487145	100267029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
Isoform_31018_3	chr12	-	5585	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	54	3	-38	-3	multi-exon	TRUE	canonical	3	13	junction_6	9.17196816392207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAACTCAAGTATTT	NA	False	NA	-7	True	AATAAA	-16	NA	100691325	100514700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
Isoform_31019_5	chr12	-	4309	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	-10	1343	-10	-4	multi-exon	FALSE	canonical	3	13	junction_6	9.17196816392207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTTTGGGTCATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	100691389	100516040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
Isoform_3102_718	chr10	-	1454	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	111	1	-17	-1	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235273	80228373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
Isoform_31020_6	chr12	-	4186	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	0	1456	0	-3	multi-exon	FALSE	canonical	3	13	junction_6	9.17196816392207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTATCCTGTTCACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	100691379	100516153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
Isoform_31021_6	chr12	-	4276	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	23	1343	23	-4	multi-exon	FALSE	canonical	3	13	junction_6	9.17196816392207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTTTGGGTCATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	100691356	100516040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
Isoform_31025_6	chr12	-	2068	13	ISM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	15	22188	15	-16268	5prime_fragment	FALSE	canonical	3	13	junction_2	8.96133670584671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATCTTGAGGTTATAT	NA	False	NA	NA	False	AATAAA	-29	NA	100691364	100536885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
Isoform_31026_4	chr12	-	2740	13	ISM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	0	21531	0	-15611	5prime_fragment	FALSE	canonical	3	13	junction_2	8.96133670584671	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAATTTTTTTAATCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	100691379	100536228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
Isoform_31029_10	chr12	-	2933	3	FSM	ENSMUSG00000047415.13	ENSMUST00000110065.8	2900	3	-30	-3	-13	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGTGTGCAGTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	100874470	100842940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100845672_100854242_100854332_100874357
Isoform_3103_217	chr10	-	1506	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	59	1	59	-1	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235325	80228373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
Isoform_31032_3	chr12	-	3236	5	NIC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	-102	-3	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	44.9471912359382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGAGCCCTGGTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	100888975	100877784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450
Isoform_31033_3	chr12	-	10785	30	NIC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	25	-2	intron_retention	FALSE	canonical	3	38	junction_5	24.7293554827487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGCCCTGGTTTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	100995290	100877783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
Isoform_31039_30	chr12	-	7568	30	FSM	ENSMUSG00000021182.17	ENSMUST00000068411.5	7542	30	-25	-1	-25	1	multi-exon	TRUE	canonical	3	67	junction_4	21.6322633049711	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTGGTTTTCTTCAG	NA	False	NA	-2	True	AATAAA	-18	NA	100995340	100877780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
Isoform_3104_27	chr10	-	1570	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	-6	2	-6	-2	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235390	80228374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
Isoform_31046_3	chr12	-	2598	2	ISM	ENSMUSG00000021182.17	ENSMUST00000223097.2	1253	7	-155	56688	-8	-56688	5prime_fragment	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100995323	100992290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_100994596_100995030
Isoform_31050_21	chr12	-	4607	16	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	206.879825556341	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8812	False	NA	-24	True	AATAAA	-25	NA	101049921	101005770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_31053_27	chr12	-	4586	16	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	13	-4	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	188.655052646063	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTGTATTAATTGTATG	8790	False	NA	-28	True	AATAAA	-21	NA	101049943	101005774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_31058_166	chr12	-	4469	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	15	-401	15	-2	multi-exon	FALSE	canonical	3	147	junction_8	127.060085416792	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTATTAATTGTATGTT	8792	False	NA	-26	True	AATAAA	-23	NA	101049941	101005772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_31061_17	chr12	-	4575	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	15	-507	15	1	multi-exon	FALSE	canonical	3	147	junction_8	127.060085416792	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGGTACCTTATTAAA	8792	False	NA	80	True	AATAAA	-14	NA	101049941	101005666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_31067_426	chr12	-	4424	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	-19	111	15	-8	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAATTGTATTAATTG	8792	False	NA	-32	True	AATAAA	-17	NA	101049941	101005778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_31076_31	chr12	-	4512	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	5	-1	5	1	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGGTACCTTATTAAA	8816	False	NA	80	True	AATAAA	-14	NA	101049917	101005666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_3108_45	chr10	-	1533	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105348.8	1222	7	-14	-297	-14	-3	multi-exon	FALSE	canonical	3	94	junction_5	422.225617676406	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235270	80228375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80235051
Isoform_3109_28	chr10	-	1570	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105348.8	1222	7	-49	-299	-49	-1	multi-exon	FALSE	canonical	3	94	junction_5	422.225617676406	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235305	80228373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80235051
Isoform_31093_15	chr12	-	4393	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	163.048509120846	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTATGTTTCTTTTC	8812	False	NA	-19	True	AATAAA	-30	NA	101049921	101005765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_101007039_101008083_101008311_101008737_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_31103_11	chr12	-	2284	11	FSM	ENSMUSG00000021186.10	ENSMUST00000021603.9	5829	11	168	3377	72	-5	multi-exon	FALSE	canonical	3	12	junction_2	1.74355957741627	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATCTTGTGTTTGGTTA	NA	False	NA	NA	False	ATTAAA	-8	NA	101785146	101716200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784992
Isoform_31104_5	chr12	-	2570	11	FSM	ENSMUSG00000021186.10	ENSMUST00000021603.9	5829	11	-115	3374	-115	-2	multi-exon	FALSE	canonical	3	12	junction_2	1.74355957741627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTGTTTGGTTAATT	NA	False	NA	NA	False	ATTAAA	-11	NA	101785429	101716197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784992
Isoform_31105_5	chr12	-	2401	11	FSM	ENSMUSG00000021186.10	ENSMUST00000021603.9	5829	11	54	3374	-42	-2	multi-exon	FALSE	canonical	3	12	junction_2	1.74355957741627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTGTTTGGTTAATT	NA	False	NA	NA	False	ATTAAA	-11	NA	101785260	101716197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784992
Isoform_31106_3	chr12	-	6390	21	NIC	ENSMUSG00000021188.15	novel	9873	21	NA	NA	7	157	combination_of_known_junctions	TRUE	canonical	3	7	junction_20	5.42678542048605	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGGTGTCAGAAGAGCA	7555	False	NA	NA	False	AATAAA	-24	NA	101879392	101803647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872073_101878948
Isoform_31114_16	chr12	-	5341	11	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	87.9545337091841	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTCTCTATTTCTAAT	NA	False	NA	-7	True	AATAAA	-18	NA	101924488	101885161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914305_101914533_101914699_101924392
Isoform_31123_103	chr12	-	5283	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	79	1	-19	-1	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTCTATTTCTAATT	NA	False	NA	-6	True	AATAAA	-19	NA	101924426	101885160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
Isoform_31125_65	chr12	-	5344	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	18	1	15	-1	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTCTATTTCTAATT	NA	False	NA	-6	True	AATAAA	-19	NA	101924487	101885160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
Isoform_31127_7	chr12	-	1335	10	ISM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	40	7267	37	-3087	5prime_fragment	FALSE	canonical	3	190	junction_1	41.7943229649526	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTTCCTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	101924465	101892426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
Isoform_31128_5	chr12	-	949	9	FSM	ENSMUSG00000021189.12	ENSMUST00000159883.2	879	9	-46	-24	-46	-1	multi-exon	FALSE	canonical	3	37	junction_7	92.3612980365694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTTGTCTGTTTATAA	NA	False	NA	-1	True	ATTAAA	-20	NA	101924453	101899183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914305_101914533_101914699_101924392
Isoform_31129_5	chr12	-	1002	9	FSM	ENSMUSG00000021189.12	ENSMUST00000159883.2	879	9	-98	-25	0	0	multi-exon	FALSE	canonical	3	37	junction_7	92.3612980365694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTCTGTTTATAAA	NA	False	NA	0	True	ATTAAA	-21	NA	101924505	101899182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914305_101914533_101914699_101924392
Isoform_3113_35	chr10	-	1653	6	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-45	-2	intron_retention	FALSE	canonical	3	303	junction_5	389.715485963799	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235301	80228374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
Isoform_31130_28	chr12	-	965	9	FSM	ENSMUSG00000021189.12	ENSMUST00000161011.8	1000	9	37	-2	37	0	multi-exon	FALSE	canonical	3	289	junction_2	19.5380238253514	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTCTGTTTATAAA	NA	False	NA	0	True	ATTAAA	-21	NA	101924465	101899182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
Isoform_31132_74	chr12	-	302	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	220	-11	220	3	multi-exon	FALSE	canonical	3	411	junction_2	787	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAAAGTGTGATTCTT	NA	False	NA	-6	True	AATAAA	-23	NA	101941966	101934357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101934470_101935751_101935894_101941918
Isoform_31133_24	chr12	-	333	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	188	-10	188	2	multi-exon	FALSE	canonical	3	411	junction_2	787	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTAAAGTGTGATTCT	NA	False	NA	-7	True	AATAAA	-22	NA	101941998	101934358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101934470_101935751_101935894_101941918
Isoform_31135_397	chr12	-	303	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	547	11	220	1	multi-exon	FALSE	canonical	3	1653	junction_2	166	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTTAAAGTGTGATTC	NA	False	NA	-8	True	AATAAA	-21	NA	101941966	101934359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101934470_101935751_101935897_101941918
Isoform_31136_6	chr12	-	562	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	288	11	-39	1	multi-exon	FALSE	canonical	3	1653	junction_2	166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTTAAAGTGTGATTC	NA	False	NA	-8	True	AATAAA	-21	NA	101942225	101934359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101934470_101935751_101935897_101941918
Isoform_31137_8	chr12	-	365	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	489	7	162	5	multi-exon	FALSE	canonical	3	1653	junction_2	166	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAAGTGTGATTCTTTT	NA	False	NA	-4	True	AATAAA	-25	NA	101942024	101934355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_101934470_101935751_101935897_101941918
Isoform_3114_93	chr10	-	1626	6	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	303	junction_5	389.715485963799	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235273	80228373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
Isoform_31146_1230	chr12	-	1921	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	85	-16	85	2	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	1230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTGTGGTTTGTG	7574	False	NA	-1	True	AAAACA	-31	NA	102405987	102360340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
Isoform_31154_719	chr12	-	2907	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	11	0	-5	0	multi-exon	TRUE	canonical	3	205	junction_5	27.4851250454756	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2418	False	NA	-1	True	AATAAA	-20	NA	102671178	102534840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
Isoform_31155_351	chr12	-	2954	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	-36	0	-36	0	multi-exon	FALSE	canonical	3	205	junction_5	27.4851250454756	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2371	False	NA	-1	True	AATAAA	-20	NA	102671225	102534840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
Isoform_31160_20	chr12	-	2898	9	NIC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	82.2632967975391	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2402	False	NA	-1	True	AATAAA	-20	NA	102671194	102534840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102670980
Isoform_31162_26	chr12	-	3033	11	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	97.2501928018654	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2418	False	NA	-1	True	AATAAA	-20	NA	102671178	102534840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102546539_102546666_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
Isoform_31166_42	chr12	-	1761	2	FSM	ENSMUSG00000096458.8	ENSMUST00000178384.2	1284	2	18	-495	2	495	multi-exon	FALSE	canonical	3	30	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGATCTTTGTATA	NA	False	NA	-26	True	AATAAA	-13	NA	102709902	102707993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102709654_102709801
Isoform_31168_182	chr12	-	1920	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	892	-17	892	17	multi-exon	FALSE	canonical	3	96	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTAATACTACATTTGA	6382	False	NA	-6	True	AATAAA	-33	NA	102724039	102707973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102709654_102723799
Isoform_31169_9	chr12	-	3800	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	890	-1895	890	1895	multi-exon	FALSE	canonical	3	96	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTACTGGAGAGAATC	6380	False	NA	NA	False	NA	NA	NA	102724041	102706095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102709654_102723799
Isoform_3117_300	chr10	-	1529	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235273	80228374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
Isoform_31172_44	chr12	-	1130	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	21	1	21	-1	multi-exon	FALSE	canonical	3	237	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTTTCTGTAGCCTCT	6383	False	NA	-2	True	AATAAA	-19	NA	102724038	102719534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102720426_102723799
Isoform_31174_7	chr12	-	8223	12	FSM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	-68	2	-3	-2	multi-exon	FALSE	canonical	3	7	junction_10	26.1040511722473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGCTGAGTTGGACATAG	NA	False	NA	-14	True	AATAAA	-13	NA	102844733	102747057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102807297_102807451_102844474
Isoform_31178_57	chr12	-	8019	11	FSM	ENSMUSG00000041702.8	ENSMUST00000045652.8	4035	11	-145	-3839	-15	-2	multi-exon	FALSE	canonical	3	58	junction_1	8.02745289615579	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGCTGAGTTGGACATAG	NA	False	NA	-14	True	AATAAA	-13	NA	102844682	102747057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
Isoform_3118_81	chr10	-	1561	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-49	-2	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235305	80228374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
Isoform_31180_14	chr12	-	8067	11	FSM	ENSMUSG00000041702.8	ENSMUST00000045652.8	4035	11	-192	-3840	1	-1	multi-exon	TRUE	canonical	3	58	junction_1	8.02745289615579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCTGAGTTGGACATAGT	NA	False	NA	-13	True	AATAAA	-14	NA	102844729	102747056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
Isoform_31182_6	chr12	-	3493	3	FSM	ENSMUSG00000041702.8	ENSMUST00000221376.2	3509	3	14	2	14	-2	multi-exon	FALSE	canonical	3	63	junction_2	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTGGTATATCTTTAT	NA	False	NA	NA	False	NA	NA	NA	102844716	102801893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_102804957_102806358_102806547_102844474
Isoform_31183_3	chr12	-	3415	5	FSM	ENSMUSG00000041669.16	ENSMUST00000074416.10	909	5	-49	-2457	-49	2457	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCACTGTTGTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	103208458	103160709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_103163611_103168907_103169038_103201844_103201981_103207598_103207722_103208333
Isoform_31185_8	chr12	-	721	2	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	11633	-3	11633	-1	3prime_fragment	FALSE	canonical	3	41	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGCCCTGTGATTCCT	NA	False	NA	-3	True	AATAAA	-14	NA	103290210	103287401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_103287934_103290021
Isoform_31186_15	chr12	-	1173	3	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	10044	-2	10044	-2	3prime_fragment	FALSE	canonical	3	27	junction_2	7	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGCCCTGTGATTCC	NA	False	NA	-4	True	AATAAA	-13	NA	103291799	103287402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_103287934_103290021_103290176_103291311
Isoform_31188_3	chr12	-	1407	3	NNC	ENSMUSG00000021200.15	novel	2399	6	NA	NA	10034	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCCTGTGATTCCTGG	NA	False	NA	-1	True	AATAAA	-16	NA	103291809	103287399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_103287934_103290021_103290176_103291090
Isoform_31207_29	chr12	-	3036	9	NIC	ENSMUSG00000041645.15	novel	3063	9	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_8	276.698278816475	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGAGGGTGTTGCAGT	NA	False	NA	-13	True	ATTAAA	-19	NA	103392073	103374241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103391845
Isoform_31209_1592	chr12	-	2875	9	FSM	ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	-26	1	-15	0	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGAGGGTGTTGCAGT	NA	False	NA	-13	True	ATTAAA	-19	NA	103392104	103374241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
Isoform_31210_28	chr12	-	2941	9	FSM	ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	-90	-1	-79	1	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGGTGTTGCAGTGT	NA	False	NA	-11	True	ATTAAA	-21	NA	103392168	103374239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
Isoform_31225_70	chr12	-	1218	3	FSM	ENSMUSG00000021095.6	ENSMUST00000021513.6	1268	3	39	11	39	-11	multi-exon	FALSE	canonical	3	74	junction_1	3	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGCCATGTTGTATTTC	NA	False	NA	-22	True	AATAAA	-15	NA	104439550	104437478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_104437906_104438251_104438512_104439019
Isoform_31238_186	chr12	-	6461	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-140	7	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4270	False	NA	-34	True	AATAAA	-21	NA	104718351	104657694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
Isoform_31239_20	chr12	-	10164	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTCTTTAGCTTTGT	4261	False	NA	-8	True	AATAAA	-16	NA	104718360	104654000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
Isoform_31243_36	chr12	-	6349	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-125	-7	combination_of_known_junctions	FALSE	canonical	3	34	junction_26	53.666423842203	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGAACTAATTTTGGT	4285	False	NA	-33	True	AATAAA	-22	NA	104718336	104657693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104718006
Isoform_31245_13	chr12	-	6295	27	FSM	ENSMUSG00000041415.12	ENSMUST00000041987.8	9851	27	-140	3696	-140	5	multi-exon	FALSE	canonical	3	28	junction_26	55.5751530194573	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTTGGAACTAATTTT	4270	False	NA	-36	True	AATAAA	-19	NA	104718351	104657696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104718006
Isoform_31253_7	chr12	-	3368	14	FSM	ENSMUSG00000021097.16	ENSMUST00000109937.9	3529	14	-112	273	-45	4	multi-exon	FALSE	non_canonical	0	0	junction_1	16.3518994427135	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGAGTCTTTCTACCGC	NA	False	NA	-20	True	AATAAA	-19	NA	104831380	104738011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_104738223_104739440_104739534_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
Isoform_31254_49	chr12	-	3267	13	FSM	ENSMUSG00000021097.16	ENSMUST00000109936.3	11866	13	-43	8642	-43	-2	multi-exon	FALSE	canonical	3	35	junction_6	8.27143679578504	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAGGGCGGAGTCTTTC	NA	False	NA	-26	True	AATAAA	-13	NA	104831378	104738017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
Isoform_31255_11	chr12	-	6288	14	NNC	ENSMUSG00000021097.16	novel	3529	14	NA	NA	-44	2762	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.0539956204422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTGTTCCA	NA	False	NA	NA	False	AATAAA	-25	NA	104831379	104734976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_104737839_104737859_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
Isoform_31260_732	chr12	-	1395	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	-3	6	-3	2	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTCGTGCTCTTGGA	NA	False	NA	-8	True	AATAAA	-17	NA	105188999	105183014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
Isoform_31261_1041	chr12	-	1369	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	22	7	1	1	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105188974	105183015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
Isoform_31272_328	chr12	-	1232	5	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	843.075730584151	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTCGTGCTCTTGGA	NA	False	NA	-8	True	AATAAA	-17	NA	105188974	105183014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_105183179_105183202_105183321_105183364_105183961_105184917_105185089_105188791
Isoform_31273_89	chr12	-	1283	5	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	843.075730584151	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189026	105183015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_105183179_105183202_105183321_105183364_105183961_105184917_105185089_105188791
Isoform_31280_3	chr12	-	7548	42	FSM	ENSMUSG00000041341.11	ENSMUST00000041055.9	7546	42	-6	4	-6	-1	multi-exon	FALSE	canonical	3	12	junction_11	13.111882981186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATTGTTGTATACGTC	NA	False	NA	-2	True	AATAAA	-17	NA	105651476	105582398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602812_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
Isoform_31283_21	chr12	-	7554	42	NIC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	50	junction_40	9.83879584241854	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTTGTATACGTCCAT	NA	False	NA	1	True	AATAAA	-20	NA	105651476	105582395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
Isoform_31284_8	chr12	-	7656	42	NIC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_40	9.83879584241854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTATACGTCCATG	NA	False	NA	2	True	AATAAA	-21	NA	105651577	105582394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
Isoform_31285_11	chr12	-	6926	42	NIC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-45	-665	combination_of_known_junctions	FALSE	canonical	3	50	junction_40	9.83879584241854	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTACTGACAAGAGCTC	NA	False	NA	-10	True	ATTAAA	-16	NA	105651515	105583062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
Isoform_31287_3	chr12	-	2846	11	FSM	ENSMUSG00000041341.11	ENSMUST00000221568.2	3833	11	-23	1010	-12	-1010	multi-exon	FALSE	canonical	3	50	junction_9	7.93725393319377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCATGATGCAATGTAG	NA	False	NA	NA	False	AATAAA	-19	NA	105651482	105626532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
Isoform_31288_6	chr12	-	2357	2	NNC	ENSMUSG00000048251.16	novel	2522	2	NA	NA	22615	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	9594	False	NA	NA	False	NA	NA	NA	107947058	107881480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_107883674_107946894
Isoform_3129_1413	chr10	-	415	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	30	0	-5	0	multi-exon	FALSE	canonical	3	4161	junction_1	104.5	1413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	False	NA	-1	True	ATTAAA	-21	NA	80242634	80238830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80238990_80239969_80240121_80242529
Isoform_31291_41	chr12	-	2703	14	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	0	60	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	177.875064192647	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTAGGACTCGAGT	NA	False	NA	-7	True	ATTAAA	-19	NA	108145573	108072864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108133531_108133655_108145411
Isoform_31293_31	chr12	-	2897	14	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-26	-7	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	177.875064192647	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGTTTTTGTTTGTT	NA	False	NA	-7	True	ATTAAA	-12	NA	108145599	108072696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108133531_108133655_108145411
Isoform_31297_633	chr12	-	2593	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	-13	175	-13	60	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTAGGACTCGAGT	NA	False	NA	-7	True	ATTAAA	-19	NA	108145586	108072864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
Isoform_31298_495	chr12	-	2745	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	2	8	2	-8	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGTGTTTTTGTTTGT	NA	False	NA	-8	True	ATTAAA	-11	NA	108145571	108072697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
Isoform_31299_28	chr12	-	2142	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	-50	663	-50	-56	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTAGCTTCCCTATTT	NA	False	NA	NA	False	TATAAA	-22	NA	108145623	108073352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
Isoform_31304_58	chr12	-	2600	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	90	junction_9	135.793596411783	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTTTTGTTTGTTCC	NA	False	NA	-5	True	ATTAAA	-14	NA	108145572	108072694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
Isoform_31306_75	chr12	-	2452	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-21	60	combination_of_known_junctions	FALSE	canonical	3	90	junction_9	135.793596411783	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTAGGACTCGAGT	NA	False	NA	-7	True	ATTAAA	-19	NA	108145594	108072864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
Isoform_31311_22	chr12	-	2432	11	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-20	66	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	133.084334164469	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGGACTCGAGTCCTCGT	NA	False	NA	-1	True	ATTAAA	-25	NA	108145593	108072858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
Isoform_31312_20	chr12	-	2596	11	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-20	-5	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	133.084334164469	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTTTTGTTTGTTCC	NA	False	NA	-5	True	ATTAAA	-14	NA	108145593	108072694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
Isoform_31315_11	chr12	-	4341	7	FSM	ENSMUSG00000084883.3	ENSMUST00000136175.3	1302	7	-294	-2745	-2	2	multi-exon	FALSE	canonical	2	6	junction_4	32.190405748021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGTGTGTAGTGCTTT	NA	False	NA	-5	True	AATAAA	-21	NA	108241686	108169858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108183045_108183085_108187967_108188042_108240596
Isoform_31316_152	chr12	-	4287	6	FSM	ENSMUSG00000084883.3	ENSMUST00000222310.2	4298	6	13	-2	13	2	multi-exon	FALSE	canonical	3	57	junction_4	9.83056458195561	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGTGTGTAGTGCTTT	NA	False	NA	-5	True	AATAAA	-21	NA	108241671	108169858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108187967_108188042_108240596
Isoform_31317_6	chr12	-	4326	7	NNC	ENSMUSG00000084883.3	novel	1302	7	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	31.7122478967775	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGAGTGTGTAGTGCTT	NA	False	NA	-6	True	AATAAA	-20	NA	108241675	108169859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177879_108183045_108183085_108187967_108188042_108240596
Isoform_31318_36	chr12	-	4283	6	NNC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	14	2	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_4	24.5307969703391	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGTGTGTAGTGCTTT	NA	False	NA	-5	True	AATAAA	-21	NA	108241670	108169858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177879_108187967_108188042_108240596
Isoform_31320_51	chr12	-	1977	4	FSM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	8	junction_1	5.09901951359278	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGCTCCTCTGTGCGT	NA	False	NA	NA	False	AATAAA	-18	NA	108801810	108791798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_108793415_108793599_108793684_108797122_108797167_108801577
Isoform_31323_509	chr12	-	1854	11	NIC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_1	519.514003661114	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860062	108825959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
Isoform_31342_5062	chr12	-	2790	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	37	4	0	0	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	5062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860063	108825959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
Isoform_31358_4	chr12	-	3682	6	NIC	ENSMUSG00000040867.14	novel	2707	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	8	junction_3	1.6	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCCCAGGTTTGCATT	NA	False	NA	-6	True	AATAAA	-13	NA	109034142	108998112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_109001338_109002921_109003030_109003578_109003646_109004777_109004940_109018759_109018789_109034051
Isoform_31359_5	chr12	-	2277	4	FSM	ENSMUSG00000113581.2	ENSMUST00000222401.2	1380	4	-893	-4	-893	1	multi-exon	FALSE	canonical	1	5	junction_3	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTACAGTGTGGACTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	110245499	110241817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110242012_110243059_110243861_110243984_110244184_110244416
Isoform_31395_20142	chr12	-	2768	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	88	425	-18	-2	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	20142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662741	110657463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
Isoform_31397_1251	chr12	-	2902	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	-46	425	-46	-2	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662875	110657463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
Isoform_31476_28	chr12	-	1671	12	FSM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	22	0	10	0	multi-exon	FALSE	canonical	3	80	junction_11	66.0974737267458	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7682	False	NA	-3	True	AATATA	-18	NA	110807351	110774231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
Isoform_31478_15	chr12	-	1644	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1835	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_11	66.2311254884822	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9507	False	NA	-3	True	AATATA	-18	NA	110805526	110774231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
Isoform_31480_5	chr12	-	1727	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	81.0791879013585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGGTTTGTTTCATTTT	7672	False	NA	-2	True	AATATA	-19	NA	110807361	110774230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794610_110800559_110800675_110807179
Isoform_31481_9	chr12	-	1509	10	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	56	junction_8	78.5509192408354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	7680	False	NA	-6	True	AATATA	-15	NA	110807353	110774234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
Isoform_31482_19	chr12	-	1494	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1824	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_8	78.692086288549	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9496	False	NA	-3	True	AATATA	-18	NA	110805537	110774231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
Isoform_31483_20	chr12	-	1397	9	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	74.9615526453395	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7680	False	NA	-3	True	AATATA	-18	NA	110807353	110774231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
Isoform_31485_3	chr12	-	1596	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	47	-1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	74.8416510191533	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7719	False	NA	-4	True	AATATA	-17	NA	110807314	110774232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
Isoform_31486_7	chr12	-	1610	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1825	-7	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	74.9526572340586	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTATGCAAGGGTTTGT	9497	False	NA	-10	True	AATATA	-11	NA	110805536	110774238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
Isoform_31487_3	chr12	-	1482	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	87.7762306474063	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7672	False	NA	-4	True	AATATA	-17	NA	110807361	110774232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
Isoform_31488_6	chr12	-	1365	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	86.7942070359537	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	7672	False	NA	-6	True	AATATA	-15	NA	110807361	110774234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
Isoform_31489_36	chr12	-	1506	11	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	80	junction_10	69.6330381356436	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7672	False	NA	-4	True	AATATA	-17	NA	110807361	110774232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
Isoform_31492_19	chr12	-	1463	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1842	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_10	69.773992289391	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9514	False	NA	-3	True	AATATA	-18	NA	110805519	110774231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
Isoform_31493_7	chr12	-	1347	9	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	83.5867812515831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	7669	False	NA	-5	True	AATATA	-16	NA	110807364	110774233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
Isoform_31494_15	chr12	-	1302	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1842	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_7	83.7383387403882	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9514	False	NA	-3	True	AATATA	-18	NA	110805519	110774231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
Isoform_31495_19	chr12	-	1231	8	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	79.9971938283348	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7672	False	NA	-3	True	AATATA	-18	NA	110807361	110774231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
Isoform_31497_5	chr12	-	1579	10	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	-3	intron_retention	FALSE	canonical	3	80	junction_9	70.9795658301183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	7680	False	NA	-6	True	AATATA	-15	NA	110807353	110774234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
Isoform_3150_204	chr10	-	2895	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	-27	82	-27	12	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATCGTCATATTTCA	NA	False	NA	-2	True	TATAAA	-26	NA	80269508	80245429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31500_256	chr12	-	1464	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	22	543	1	9	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTGTTGAGTTAACTG	3371	False	NA	-1	True	NA	NA	NA	110855557	110839586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
Isoform_31502_5	chr12	-	2005	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	17	7	3	-7	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCCGGTTTTTCCTGTC	3366	False	NA	NA	False	TATAAA	-22	NA	110855562	110839050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
Isoform_31506_8	chr12	-	956	5	FSM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	14	-247	-3	241	multi-exon	FALSE	canonical	3	69	junction_1	152.938508885107	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATGTGTGTGGGTATG	3392	False	NA	NA	False	NA	NA	NA	110855536	110841220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323_110850493_110855499
Isoform_31507_27	chr12	-	731	5	FSM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	-7	-1	1	1	multi-exon	FALSE	canonical	3	69	junction_1	152.938508885107	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTGTAGGAGGTTAA	3371	False	NA	-18	True	AATAAA	-9	NA	110855557	110841466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323_110850493_110855499
Isoform_31509_5	chr12	-	2448	3	FSM	ENSMUSG00000021276.11	ENSMUST00000220631.2	1356	3	10	-1102	1	1	multi-exon	FALSE	canonical	3	430	junction_1	12	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTAGTTATTTCTGTC	3371	False	NA	-2	True	AATAAA	-19	NA	110855557	110844027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110846249_110850323_110850493_110855499
Isoform_3151_190	chr10	-	2916	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	2	32	-2	1	multi-exon	TRUE	canonical	3	747	junction_5	176.383700711101	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269479	80245379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31510_21	chr12	-	1571	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	0	-8	0	5	multi-exon	FALSE	canonical	0	0	junction_1	45.784519460427	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCCTGGTCTGTTGCA	NA	False	NA	-1	True	NA	NA	NA	110945429	110942854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
Isoform_31511_21	chr12	-	1582	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	-17	-2	9	0	multi-exon	FALSE	canonical	0	0	junction_1	45.784519460427	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	-7	True	NA	NA	NA	110945446	110942860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
Isoform_31512_29	chr12	-	1539	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	-36	1074	-36	0	multi-exon	FALSE	canonical	3	78	junction_1	17	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	-7	True	NA	NA	NA	110945510	110942860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110943983_110944381_110944562_110945273
Isoform_31513_78	chr12	-	1457	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	46	1074	1	0	multi-exon	FALSE	canonical	3	78	junction_1	17	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	-7	True	NA	NA	NA	110945428	110942860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110943983_110944381_110944562_110945273
Isoform_31514_4	chr12	-	2527	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	46	4	1	-4	multi-exon	FALSE	canonical	3	78	junction_1	17	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATCCTTCGTCTTGACT	NA	False	NA	NA	False	AAAAAG	-18	NA	110945428	110941790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110943983_110944381_110944562_110945273
Isoform_31515_26	chr12	-	1589	4	NNC	ENSMUSG00000037904.15	novel	1563	4	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	38.9386982604994	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCCTGGTCTGTTGCA	NA	False	NA	-1	True	NA	NA	NA	110945429	110942854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_110943983_110944079_110944205_110944381_110944562_110945273
Isoform_31517_20	chr12	-	1679	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	27	0	1	0	multi-exon	FALSE	canonical	3	51	junction_1	30.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	-7	True	NA	NA	NA	110945428	110942860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110944205_110944381_110944562_110945273
Isoform_3152_706	chr10	-	2870	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	0	80	0	14	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269481	80245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31534_105	chr12	-	6614	37	FSM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	100	0	1	0	multi-exon	TRUE	canonical	3	105	junction_28	14.8707393524629	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111344052	111259409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
Isoform_31540_3	chr12	-	6776	37	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-21	0	intron_retention	FALSE	canonical	3	7	junction_17	25.2420993629079	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111344074	111259409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278141_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
Isoform_31564_14129	chr12	-	1428	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	42	2	-13	-2	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	14129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGAGTGTTGCTTCT	NA	False	NA	-10	True	AATAAA	-19	NA	111638730	111635796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
Isoform_31568_214	chr12	-	1510	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-16	0	intron_retention	FALSE	canonical	3	7551	junction_5	335.592345297419	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638733	111635794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111638014_111638199_111638408_111638663
Isoform_31593_7	chr12	-	2402	2	FSM	ENSMUSG00000049792.7	ENSMUST00000160576.2	1852	2	-140	-410	-114	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCTGTCCCCCTGTG	NA	False	NA	NA	False	CATAAA	-14	NA	111679501	111675927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_111677847_111679018
Isoform_31595_115	chr12	-	2074	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	59	6	59	-6	multi-exon	FALSE	canonical	3	159	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCTGTCCCCCTGTG	NA	False	NA	NA	False	CATAAA	-14	NA	111679632	111675927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_111677847_111679477
Isoform_31600_3	chr12	-	2755	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	19	-635	19	635	multi-exon	FALSE	canonical	3	159	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCAGCGCTTTGATAAC	NA	False	NA	NA	False	AATAAA	-17	NA	111679672	111675286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_111677847_111679477
Isoform_31601_5	chr12	-	2383	7	NIC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	29.3508470443737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATCAACACTTGCAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	111778655	111769630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776379_111777291_111777430_111778494
Isoform_31602_21	chr12	-	2378	9	NNC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.3241654059033	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATCAACACTTGCAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	111780285	111769630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_111770507_111770536_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776379_111777291_111777430_111778494_111778654_111780258
Isoform_31604_5	chr12	-	4064	7	ISM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	-36	-1	-4	0	intron_retention	FALSE	canonical	3	68	junction_3	10.4947076609541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACTTGCAAATTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	111780311	111769625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494
Isoform_31605_106	chr12	-	2396	9	NNC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	3	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	28.3857358544745	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATCAACACTTGCAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	111780283	111769630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_111770507_111770536_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
Isoform_31606_104	chr12	-	2456	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	-38	4	-6	-4	multi-exon	FALSE	canonical	3	57	junction_7	12.8809303758284	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATCAACACTTGCAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	111780313	111769630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
Isoform_31608_140	chr12	-	4385	17	FSM	ENSMUSG00000021285.16	ENSMUST00000054815.15	4389	17	3	1	3	-1	multi-exon	FALSE	canonical	3	36	junction_7	8.14108983797624	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGAGTCCTTTGAGTCT	1116	False	NA	-1	True	AATAAA	-18	NA	111874541	111794891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235_111801738_111802046_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111832848_111832969_111838719_111838868_111874295
Isoform_31612_656	chr12	-	396	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	-30	0	-30	0	multi-exon	TRUE	canonical	3	2424	junction_1	129.659382828839	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	-7	True	AATAAA	-18	NA	111933441	111927808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
Isoform_31613_13	chr12	-	464	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	-98	0	-98	0	multi-exon	FALSE	canonical	3	2424	junction_1	129.659382828839	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	-7	True	AATAAA	-18	NA	111933509	111927808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
Isoform_31614_23	chr12	-	2353	4	FSM	ENSMUSG00000054013.7	ENSMUST00000066791.7	2380	4	27	0	27	0	multi-exon	FALSE	canonical	1	1	junction_3	2.16024689946929	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGTGTGGATGAGGAG	NA	False	NA	-10	True	AATAAA	-20	NA	112477579	112466622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112468357_112469675_112469755_112470967_112471106_112477177
Isoform_31620_577	chr12	-	2675	14	FSM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	8	7	8	-7	multi-exon	FALSE	canonical	3	224	junction_13	42.5045768506691	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640702	112620261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
Isoform_31621_13	chr12	-	2723	14	FSM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	-40	7	-40	-7	multi-exon	FALSE	canonical	3	224	junction_13	42.5045768506691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640750	112620261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
Isoform_31623_11	chr12	-	2518	14	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	52	-6	combination_of_known_junctions	FALSE	canonical	3	3	junction_13	96.6788130843996	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGGTTTGCTTTCTG	NA	False	NA	-6	True	AATAAA	-13	NA	112641266	112620260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112641155
Isoform_31624_33	chr12	-	2579	14	NNC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-475	-6	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_13	94.3623257487333	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGGTTTGCTTTCTG	NA	False	NA	-6	True	AATAAA	-13	NA	112638473	112620260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112638301
Isoform_31625_8	chr12	-	2948	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	8	-7	intron_retention	FALSE	canonical	3	224	junction_12	44.2401118895511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640702	112620261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112626096_112628613_112628743_112637949_112638089_112640433
Isoform_31628_8	chr12	-	2726	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	29	-6	intron_retention	FALSE	canonical	3	224	junction_12	44.0734866129539	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGGTTTGCTTTCTG	NA	False	NA	-6	True	AATAAA	-13	NA	112640681	112620260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
Isoform_31630_9	chr12	-	1692	12	ISM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	10	2609	10	-587	5prime_fragment	FALSE	canonical	3	224	junction_11	43.8138436177652	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGCCCATCTCTGG	NA	False	NA	NA	False	TATAAA	-14	NA	112640700	112622863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
Isoform_31631_13	chr12	-	1349	7	NNC	ENSMUSG00000118667.1	novel	11349	7	NA	NA	6870	-9989	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.577350269189626	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAAAGCAGGATA	NA	False	NA	NA	False	AATAGA	-22	NA	112759407	112748616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_112749216_112749335_112749512_112749782_112749925_112750608_112750711_112751520_112751620_112751742_112751799_112759232
Isoform_31634_33	chr12	-	2340	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	78	7	63	1	multi-exon	FALSE	canonical	3	30	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATGTGTTAGGAGCC	9724	False	NA	-7	True	ATTAAA	-12	NA	112792931	112783855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112785733_112792468
Isoform_31637_734	chr12	-	1967	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	28	-1	-6	1	multi-exon	FALSE	canonical	3	463	junction_1	0	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATGTGTTAGGAGCC	9640	False	NA	-7	True	ATTAAA	-12	NA	112793015	112783855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112785733_112792925
Isoform_31638_314	chr12	-	2063	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	-68	-1	-68	1	multi-exon	FALSE	canonical	3	463	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATGTGTTAGGAGCC	9544	False	NA	-7	True	ATTAAA	-12	NA	112793111	112783855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112785733_112792925
Isoform_31642_21	chr12	-	5161	26	FSM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	-39	-16	-39	16	multi-exon	FALSE	canonical	3	8	junction_25	7.23723704185513	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTTCTGTTCCTT	NA	False	NA	-1	True	NA	NA	NA	112893435	112871422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
Isoform_31643_22	chr12	-	773	5	FSM	ENSMUSG00000002804.5	ENSMUST00000002881.5	734	5	-13	-26	-6	0	multi-exon	FALSE	canonical	3	29	junction_2	82.3995600716412	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCGCTGGCTTTGAGC	8841	False	NA	-6	True	AATAAA	-19	NA	112905750	112898348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112898671_112901975_112902178_112902414_112902480_112902898_112902943_112905610
Isoform_31644_141	chr12	-	817	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	-12	436	-12	2	multi-exon	FALSE	canonical	3	180	junction_2	18.0277563773199	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGCTGGCTTTGAGCAC	8835	False	NA	-4	True	AATAAA	-21	NA	112905756	112898346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
Isoform_31645_3	chr12	-	1276	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	-34	-1	-34	1	multi-exon	FALSE	canonical	3	180	junction_2	18.0277563773199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGCGTAACATGAACTG	8813	False	NA	NA	False	ATTAAA	-16	NA	112905778	112897909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
Isoform_31647_3	chr12	-	2337	18	NIC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	3	-5	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_15	37.0119217677383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTAGCTGTGTGTTTA	NA	False	NA	-8	True	NA	NA	NA	112964049	112923709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951536_112951713_112956683_112956765_112963792
Isoform_31650_3	chr12	-	3931	3	FSM	ENSMUSG00000011158.9	ENSMUST00000222247.2	687	3	-282	-2962	26	-2104	multi-exon	FALSE	canonical	3	100	junction_2	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAACAACAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112964298	112948368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_112951713_112956683_112956765_112963792
Isoform_31652_6	chr12	-	3687	22	FSM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	36	-2	0	2	multi-exon	FALSE	canonical	3	13	junction_13	5.74791690552625	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGGGGCTTACTAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	116226606	116170668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
Isoform_31654_22	chr12	-	2471	2	FSM	ENSMUSG00000112980.2	ENSMUST00000220477.2	2941	2	30	440	30	-440	multi-exon	FALSE	canonical	2	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGTCTCAGTGTCTCG	NA	False	NA	1	True	NA	NA	NA	116368800	116366006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_116368264_116368586
Isoform_31655_22	chr12	-	2428	2	NNC	ENSMUSG00000112980.2	novel	2941	2	NA	NA	33	-441	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCAGTCTCAGTGTCTC	NA	False	NA	0	True	NA	NA	NA	116368797	116366007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_116368264_116368625
Isoform_31659_6	chr12	-	5706	6	FSM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-106	-2923	-34	-98	multi-exon	FALSE	canonical	2	11	junction_4	4.07921561087423	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAACAATTGCAAGTAACC	NA	False	NA	NA	False	AATAAA	-24	NA	118265209	118198765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264544_118264961
Isoform_31662_51	chr12	-	4279	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-59	1916	at_least_one_novel_splicesite	FALSE	canonical	3	227	junction_1	380.113033672021	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATCTGTTTAGTGATT	NA	False	NA	-5	True	GATAAA	-14	NA	4957498	4927115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_31667_37	chr12	-	4634	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-112	2218	at_least_one_novel_splicesite	TRUE	canonical	3	227	junction_1	380.113033672021	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTAAGACGTGGCTT	NA	False	NA	-18	True	AGTAAA	-21	NA	4957551	4926813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_3167_390	chr10	-	2879	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105343.8	2920	19	-6	47	-6	14	multi-exon	FALSE	canonical	3	359	junction_12	245.119472004073	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269487	80245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31673_40	chr12	-	2853	4	Intergenic	novelGene_2469	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	11.0855260988773	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTATTTTGTTGTT	NA	False	NA	-9	True	AATAAA	-42	NA	22302669	22291527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_22294077_22295404_22295466_22295667_22295795_22302553
Isoform_31674_16	chr12	-	2881	4	Intergenic	novelGene_2468	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	11.0855260988773	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	-8	True	AATAAA	-43	NA	22302696	22291526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_22294077_22295404_22295466_22295667_22295795_22302553
Isoform_31675_64	chr12	-	2373	4	Intergenic	novelGene_2462	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_3	39.6063967897443	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	21828904	21807779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_21809538_21810872_21810934_21811135_21811263_21828477
Isoform_31676_4	chr12	-	3312	4	Intergenic	novelGene_2460	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_3	39.6063967897443	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	21828904	21806840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_21809538_21810872_21810934_21811135_21811263_21828477
Isoform_31677_5	chr12	-	2059	4	Intergenic	novelGene_2461	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_3	55.5117605157282	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	21817689	21807779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_21809538_21810872_21810934_21811135_21811263_21817576
Isoform_31678_49	chr12	-	1471	9	NNC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	19	-19	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_1	75.0598719356755	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGTGTATAAACTTT	NA	False	NA	NA	False	AATAAA	-14	NA	56392660	56375106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_56375582_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
Isoform_3168_120	chr10	-	2922	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105343.8	2920	19	-1	-1	-1	1	multi-exon	FALSE	canonical	3	359	junction_12	245.119472004073	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269482	80245379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31681_14	chr12	-	4332	4	Genic_Genomic	ENSMUSG00000112975.2	novel	126	1	NA	NA	-306	39809	multi-exon	FALSE	canonical	3	16	junction_2	4.08248290463863	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTGGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	24302488	24262247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_24265960_24267293_24267355_24267554_24267682_24302056
Isoform_31683_15	chr12	-	4102	3	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	20	-6976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCATGAGTCTCTTAT	NA	False	NA	-6	True	AATAAA	-44	NA	20865760	20861357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_20861961_20861982_20865068_20865346
Isoform_31687_38	chr12	-	4176	3	Genic_Genomic	ENSMUSG00000099759.2	novel	1735	2	NA	NA	20	-6974	multi-exon	FALSE	non_canonical	0	0	junction_1	9.5	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGAGTCTCTTATTC	NA	False	NA	-4	True	ATTAAA	-20	NA	20865760	20861355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_20861961_20861982_20865068_20865274
Isoform_31688_3	chr12	-	422	3	Intergenic	novelGene_2470	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	12	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTTTGGGTGTTATT	NA	False	NA	NA	False	NA	NA	NA	22302664	22295281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_22295466_22295667_22295795_22302553
Isoform_31690_18	chr12	-	3278	4	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-9	-10393	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.3372087784044	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTATTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	22206656	22176149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_22178816_22180145_22180207_22180406_22180534_22206232
Isoform_31693_9	chr12	-	1029	2	Genic_Genomic	ENSMUSG00000095799.2	novel	435	1	NA	NA	-2768	97	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGTCTTGTTAATGCAA	NA	False	NA	NA	False	AATAAA	-16	NA	88219638	88216338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_88217181_88219451
Isoform_31697_3	chr12	-	4174	5	Intergenic	novelGene_2459	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	52.9386437302657	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCAAGGTCTGTGAGT	NA	False	NA	NA	False	ATTAAA	-9	NA	21828947	21776844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_21780400_21810872_21810934_21811135_21811263_21828477_21828605_21828643
Isoform_31698_5	chr12	-	751	3	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTTCTCCAGGTCA	NA	False	NA	-23	True	ATTAAA	-14	NA	86516811	86471843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_86472015_86508048_86508306_86516488
Isoform_31699_3	chr12	-	1384	3	NNC	ENSMUSG00000113608.2	novel	549	2	NA	NA	27471	905	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGTTATCTTCTTC	NA	False	NA	NA	False	AAAAAG	-45	NA	38098263	38096186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_38096710_38097291_38097424_38097534
Isoform_31700_3	chr12	-	2737	4	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-9	-5644	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.3372087784044	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGAAGATCTACTTTC	NA	False	NA	NA	False	NA	NA	NA	22206656	22171400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_22173526_22180145_22180207_22180406_22180534_22206232
Isoform_31701_5	chr12	-	4064	3	NNC	ENSMUSG00000021047.8	novel	7154	5	NA	NA	-428	-42634	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACAAGTGCAATATCTG	NA	False	NA	NA	False	NA	NA	NA	46866140	46809996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_46813175_46863668_46863813_46865398
Isoform_31702_5	chr12	-	2277	2	Intergenic	novelGene_2384	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATGTGGCTTTGACTGG	NA	False	NA	NA	False	AGTAAA	-15	NA	3608081	3601814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_3603951_3607940
Isoform_31703_7	chr12	-	2331	2	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-12	-38294	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCGCCTAAACGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	22206659	22204050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_22205955_22206232
Isoform_31704_3	chr12	-	4687	8	Genic_Genomic	ENSMUSG00000113532.2	novel	127	1	NA	NA	-303	281619	multi-exon	TRUE	non_canonical	0	0	junction_1	17.3934071488279	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTGTATTTGGTTGTT	NA	False	NA	NA	False	AATAAA	-42	NA	23477187	23195138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_23197221_23197657_23198486_23336714_23337287_23445829_23446015_23446104_23446506_23447833_23447895_23448096_23448224_23476756
Isoform_31705_7	chr12	-	2231	6	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	1	1973	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	321.746857016506	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACGTCCACTTTGAACAA	NA	False	NA	NA	False	NA	NA	NA	85871317	85860248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_85860502_85861433_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
Isoform_31706_3	chr12	-	610	2	Antisense	novelGene_ENSMUSG00000034574.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCTTGCCGCCAATAGT	NA	False	NA	NA	False	ATTAAA	-29	NA	72036562	72028558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_72028865_72036258
Isoform_31708_5	chr12	-	561	2	NNC	ENSMUSG00000113572.2	novel	1078	2	NA	NA	762	62	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAACAAAAGACTTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	71316369	71315455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_71315914_71316266
Isoform_31709_3	chr12	-	2176	2	NNC	ENSMUSG00000054013.7	novel	521	4	NA	NA	1	-10088	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCTGATGTAATCTATA	NA	False	NA	NA	False	AATAAA	-34	NA	112483180	112478259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_112480318_112483062
Isoform_31710_3	chr12	-	661	2	Intergenic	novelGene_2829	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCGGGCCAAAATAACG	NA	False	NA	NA	False	AATAAA	-16	NA	109913506	109912214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_109912630_109913260
Isoform_31713_34	chr12	+	859	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	11	3136	-11	1	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285514	3288274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
Isoform_31714_14	chr12	+	3876	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	8	122	8	-122	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAGAGTGTTAATTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	3285511	3291288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
Isoform_31715_3	chr12	+	4000	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	5	1	5	-1	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAAGCTCTTACTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	3285508	3291409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
Isoform_31717_16	chr12	+	3148	5	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-398	8658	-9	-124	5prime_fragment	FALSE	canonical	3	40	junction_4	60.7345659406569	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCAAGAGTGTTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	3285516	3291286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833
Isoform_31718_3	chr12	+	3277	5	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-404	8535	7	-1	5prime_fragment	FALSE	canonical	3	40	junction_4	60.7345659406569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAAGCTCTTACTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	3285510	3291409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833
Isoform_31721_9	chr12	+	2467	6	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-398	6827	-9	1707	5prime_fragment	FALSE	canonical	3	23	junction_5	69.4682661364166	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACAAGACTGTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	3285516	3293117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833_3289010_3291521
Isoform_31722_3	chr12	+	1662	8	FSM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-400	-439	-11	6	multi-exon	FALSE	canonical	1	4	junction_7	75.5075344260561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTAGGCCATGTCTTA	NA	False	NA	NA	False	AATAAA	-27	NA	3285514	3300383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833_3289010_3291521_3291579_3297351_3297439_3299738
Isoform_31723_11	chr12	+	820	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	-7	-1	-7	1	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285518	3288274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
Isoform_31724_6	chr12	+	3835	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	-9	-3014	-9	-123	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAAGAGTGTTAATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	3285516	3291287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
Isoform_31725_22	chr12	+	2221	3	ISM	ENSMUSG00000079179.10	ENSMUST00000177896.8	2872	7	-7	12092	-7	12	5prime_fragment	FALSE	canonical	3	138	junction_2	36.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTTGCATAGATTTGT	NA	False	NA	22	True	AATAAA	-31	NA	3285518	3288285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_3287413_3287590_3287661_3288028
Isoform_31726_4	chr12	+	4126	9	FSM	ENSMUSG00000020668.11	ENSMUST00000220210.2	4144	9	18	0	18	0	multi-exon	FALSE	canonical	3	5	junction_1	19.8679232684244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGACCTTTATT	NA	False	NA	4	True	AGTAAA	-19	NA	3415149	3454064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3415497_3415771_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
Isoform_31727_36	chr12	+	4437	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	-76	2430	-18	0	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGACCTTTATT	NA	False	NA	4	True	AGTAAA	-19	NA	3415113	3454064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
Isoform_31729_45	chr12	+	4227	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	135	2429	135	1	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATTGACCTTTATTT	NA	False	NA	5	True	AGTAAA	-20	NA	3415324	3454065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
Isoform_3173_588	chr10	-	2868	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	-7	-32	1	14	multi-exon	FALSE	canonical	3	581	junction_5	199.277305392371	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269476	80245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31730_4	chr12	+	6646	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	135	10	135	-10	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGGAGTCGCTTGCC	NA	False	NA	NA	False	AATAAA	-11	NA	3415324	3456484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
Isoform_31732_3	chr12	+	1377	2	ISM	ENSMUSG00000037486.19	ENSMUST00000140046.3	2895	4	-5	10625	-5	-10625	5prime_fragment	FALSE	canonical	3	72	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	3476906	3493544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_3477213_3492473
Isoform_31734_7	chr12	+	4612	12	NIC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	0	20	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	16.9910039396156	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGAATGCAGGTCTTCA	NA	False	NA	34	True	AATAAA	-33	NA	3476911	3552486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_3477213_3492473_3492557_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
Isoform_3174_105	chr10	-	2901	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	-40	-32	-28	14	multi-exon	FALSE	canonical	3	581	junction_5	199.277305392371	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269509	80245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31740_32	chr12	+	2367	20	FSM	ENSMUSG00000071454.14	ENSMUST00000173199.8	2820	20	54	399	0	0	multi-exon	FALSE	canonical	0	0	junction_4	121.930910004004	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622434	3831397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3823641_3829618_3829655_3831105
Isoform_31742_336	chr12	+	2384	20	FSM	ENSMUSG00000071454.14	ENSMUST00000164607.9	2390	20	6	0	4	0	multi-exon	FALSE	canonical	0	0	junction_4	90.3998198218487	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622438	3831398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
Isoform_31746_612	chr12	+	2346	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622435	3831398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
Isoform_31748_128	chr12	+	2370	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622411	3831398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
Isoform_3175_157	chr10	-	2922	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	-13	-80	-1	1	multi-exon	FALSE	canonical	3	581	junction_5	199.277305392371	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269482	80245379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31755_17	chr12	+	2312	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	113.901516915077	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622420	3831398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
Isoform_31757_41	chr12	+	2271	18	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	112.136872618653	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622420	3831398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
Isoform_31767_7	chr12	+	4228	23	NIC	ENSMUSG00000020661.16	novel	2613	19	NA	NA	-6	448	intron_retention	FALSE	canonical	2	4	junction_1	39.0183258490945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTGCTTTCTGTCTAA	117	False	NA	7	True	AATAAA	-16	NA	3856520	3958995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_3856603_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_31768_30	chr12	+	4260	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-21	5446	-21	450	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	605	False	NA	9	True	AATAAA	-18	NA	3857008	3958997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_31770_14	chr12	+	4300	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-61	5446	-61	450	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	565	False	NA	9	True	AATAAA	-18	NA	3856968	3958997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_31776_3	chr12	+	9692	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-12	5	-12	-5	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCCTTTTTTGTATTTT	614	False	NA	1	True	NA	NA	NA	3857017	3964438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_31779_3	chr12	+	5646	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-64	4103	-64	1793	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGGAGTAAAGCAAATC	562	False	NA	NA	False	AATAAA	-39	NA	3856965	3960340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_31783_51	chr12	+	3386	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	97	-1155	81	450	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	NA	False	NA	9	True	AATAAA	-18	NA	3941824	3958997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_31786_12	chr12	+	2637	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	54	-363	38	318	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTTTTTTTTCCTTT	NA	False	NA	5	True	TATAAA	-14	NA	3941781	3958205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_31787_3	chr12	+	2701	12	NIC	ENSMUSG00000020661.16	novel	2328	18	NA	NA	4	450	intron_retention	FALSE	canonical	3	107	junction_1	13.5865757761959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	NA	False	NA	9	True	AATAAA	-18	NA	3947423	3958997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_31788_3	chr12	+	946	4	ISM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	18	12426	18	406	5prime_fragment	FALSE	canonical	3	31	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	4132646	4146778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212
Isoform_31789_48	chr12	+	4674	7	FSM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	22	2	22	-2	multi-exon	FALSE	canonical	3	25	junction_5	5.84284938098603	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGGTCTGCTGGCTGC	NA	False	NA	6	True	AGTAAA	-12	NA	4132604	4160604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801
Isoform_31792_10	chr12	+	4385	9	FSM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	-47	-1404	-1	2	multi-exon	FALSE	canonical	2	4	junction_7	12.4492720670728	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGCTGGCTGCATTG	NA	False	NA	10	True	AGTAAA	-16	NA	4132581	4160608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801_4157044_4157158_4157349_4157549
Isoform_31796_11	chr12	+	4969	22	NIC	ENSMUSG00000020654.16	novel	4962	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.8737696951146	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183099	4263525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31797_16	chr12	+	4665	22	NIC	ENSMUSG00000020654.16	novel	4962	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.8737696951146	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183403	4263525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31798_8	chr12	+	4662	22	FSM	ENSMUSG00000020654.16	ENSMUST00000124505.8	4962	22	300	0	2	0	multi-exon	FALSE	canonical	3	17	junction_1	15.5787808476277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183403	4263525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31799_5	chr12	+	4956	22	FSM	ENSMUSG00000020654.16	ENSMUST00000124505.8	4962	22	6	0	6	0	multi-exon	FALSE	canonical	3	17	junction_1	15.5787808476277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183109	4263525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31800_15	chr12	+	4738	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.8737696951146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183395	4263525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4183779_4184146_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31801_9	chr12	+	5035	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.8737696951146	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183098	4263525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4183779_4184146_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31802_8	chr12	+	5020	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	15.5787808476277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183110	4263525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4183779_4184146_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31804_14	chr12	+	5029	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	15.3109863775942	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183098	4263525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31805_26	chr12	+	4723	22	NIC	ENSMUSG00000020654.16	novel	4348	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	15.3109863775942	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGACTGTTGTGGCAATT	NA	False	NA	7	True	ATTAAA	-17	NA	4183403	4263524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31806_4	chr12	+	5080	22	NIC	ENSMUSG00000020654.16	novel	4348	21	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	15.3109863775942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGACTGTTGTGGCAATT	NA	False	NA	7	True	ATTAAA	-17	NA	4183046	4263524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31809_13	chr12	+	4721	22	FSM	ENSMUSG00000020654.16	ENSMUST00000152065.8	4728	22	7	0	2	0	multi-exon	FALSE	canonical	3	14	junction_1	15.9929122623238	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183403	4263525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_31811_80	chr12	+	567	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	21	3252	21	-3252	multi-exon	FALSE	canonical	3	212	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTACTATCATCATTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	4284047	4286698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4284279_4286362
Isoform_31814_15	chr12	+	3806	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	26	8	26	-8	multi-exon	FALSE	canonical	3	212	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTCATTACCTA	NA	False	NA	NA	False	AATAAA	-20	NA	4284052	4289942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4284279_4286362
Isoform_31817_7	chr12	+	5896	39	NIC	ENSMUSG00000020640.11	novel	4977	38	NA	NA	159	-1	combination_of_known_junctions	TRUE	canonical	3	9	junction_1	16.9216255939665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTTCAAAGCTTGAC	7175	False	NA	NA	False	AATAAA	-19	NA	4642796	4763949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4642932_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
Isoform_31821_6	chr12	+	4464	28	ISM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	29	39567	-25	216	5prime_fragment	FALSE	canonical	3	59	junction_17	12.5285955496691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7415	False	NA	NA	False	NA	NA	NA	4643036	4724383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415
Isoform_31822_7	chr12	+	6955	29	NIC	ENSMUSG00000020640.11	novel	5987	39	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_28	17.6486037489008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTGTATTGTGTATTT	7440	False	NA	14	True	ATTAAA	-15	NA	4643061	4729502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
Isoform_31823_70	chr12	+	5977	39	FSM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	11	-1	11	1	multi-exon	FALSE	canonical	3	57	junction_33	12.8594576467878	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCAAAGCTTGACTC	7397	False	NA	NA	False	AATAAA	-21	NA	4643018	4763951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
Isoform_31826_616	chr12	+	762	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	17	401	0	-8	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	616	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTGTCTTCTGTTAAA	NA	False	NA	27	True	AATAAA	-17	NA	4867560	4877258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
Isoform_31830_33	chr12	+	560	2	FSM	ENSMUSG00000051721.7	ENSMUST00000219069.2	605	2	48	-3	-18	3	multi-exon	FALSE	canonical	3	75	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGGTGGTGTGTGCCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	4893375	4899346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4893452_4898862
Isoform_31832_6	chr12	+	2178	4	FSM	ENSMUSG00000051721.7	ENSMUST00000220215.2	2202	4	23	1	-2	-1	multi-exon	FALSE	canonical	2	4	junction_3	5.90668171555645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGATTTATTCAT	NA	False	NA	NA	False	NA	NA	NA	4893325	4906966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4906845
Isoform_31841_9	chr12	+	4045	21	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	5	734	combination_of_known_junctions	FALSE	canonical	3	129	junction_14	17.6790129814987	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGTGTCCTGATTGTG	NA	False	NA	NA	False	TATAAA	-15	NA	4967411	5064777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802
Isoform_31843_106	chr12	+	8016	28	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	118	junction_21	18.2748412215681	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTCTTTCTTTAGCATG	NA	False	NA	6	True	AATAAA	-14	NA	4967412	5097393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
Isoform_31844_21	chr12	+	8093	28	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-14	2	combination_of_known_junctions	FALSE	canonical	3	118	junction_21	18.2748412215681	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCATGATT	NA	False	NA	9	True	AATAAA	-17	NA	4967338	5097396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
Isoform_31848_7	chr12	+	8064	28	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_21	27.6289345558485	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTAGCATGATTGT	NA	False	NA	11	True	AATAAA	-19	NA	4967354	5097398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
Isoform_31849_33	chr12	+	8016	28	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	6	14	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_21	27.6289345558485	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATTGTGAGTATTGTT	NA	False	NA	21	True	AATAAA	-29	NA	4967412	5097408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
Isoform_31850_17	chr12	+	2798	16	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	12	16103	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	43.646254771235	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATTAAATGGTTGTGT	NA	False	NA	NA	False	AATAAA	-7	NA	4967418	5021097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5020405
Isoform_31859_75	chr12	+	2716	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	21	0	-6	0	multi-exon	TRUE	canonical	3	35	junction_1	76.8839312788367	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258127	8335759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
Isoform_3186_292	chr10	-	2874	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105344.8	2946	19	-10	82	0	12	multi-exon	FALSE	canonical	3	359	junction_12	261.05737035618	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATCGTCATATTTCA	NA	False	NA	-2	True	TATAAA	-26	NA	80269481	80245429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31863_397	chr12	+	2700	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_5	23.7533623350932	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258155	8335759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
Isoform_31867_27	chr12	+	2564	6	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	91.7243697171041	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258147	8335759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_8258205_8270599_8270756_8288442_8288616_8318363_8318599_8325807_8325891_8333899
Isoform_31869_8	chr12	+	2388	5	FSM	ENSMUSG00000037669.16	ENSMUST00000218305.2	1587	5	15	-816	1	0	multi-exon	FALSE	canonical	2	7	junction_2	100.260909630823	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258150	8335759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8258205_8270599_8270756_8318363_8318599_8325807_8325891_8333899
Isoform_31875_721	chr12	+	2943	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	7	9	7	-9	multi-exon	FALSE	canonical	3	118	junction_1	12.8765506078125	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGAATTTCAGTGTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	8363438	8393815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
Isoform_31878_24	chr12	+	2986	7	NNC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	51.6881675692481	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCAGTGTTGTTCTTTTC	NA	False	NA	NA	False	AGTAAA	-23	NA	8363449	8393823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_8363498_8367784_8367997_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
Isoform_31885_3	chr12	+	6075	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111123.9	4984	21	10	-1101	-1	-2	multi-exon	FALSE	canonical	2	7	junction_1	41.9630790100059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATATCCCTCTATATC	NA	False	NA	12	True	AATAAA	-24	NA	8724143	8802555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8724171_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_31886_3	chr12	+	3302	20	FSM	ENSMUSG00000020594.15	ENSMUST00000178015.8	5874	20	-1	2573	-1	7	multi-exon	TRUE	canonical	2	7	junction_1	43.0869121017025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8724132	8800008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8724171_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_31889_27	chr12	+	6171	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	135	5	-62	-1	multi-exon	FALSE	canonical	3	78	junction_1	34.6128227684481	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATCCCTCTATATCT	NA	False	NA	13	True	AATAAA	-25	NA	8724358	8802556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_31892_19	chr12	+	5932	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-111	-2526	-62	-3	multi-exon	FALSE	canonical	3	62	junction_12	35.415538790362	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAATATCCCTCTATAT	NA	False	NA	11	True	AATAAA	-23	NA	8724358	8802554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_31896_6	chr12	+	6152	21	NIC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-62	-5	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	40.619299600067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAAAATATCCCTCTAT	NA	False	NA	9	True	AATAAA	-21	NA	8724358	8802552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_31898_4	chr12	+	3706	20	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	0	32	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	42.809311126361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACAGTGGATGTGGTT	NA	False	NA	6	True	AATAAA	-18	NA	8724735	8800352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_8724834_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_31900_4	chr12	+	6154	21	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	23	-32	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.0381225204078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCTGGTCTTGTGT	NA	False	NA	9	True	TATAAA	-34	NA	8724703	8802525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_8724840_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_31906_1081	chr12	+	2521	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	0	636	0	17	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTCTGCTTCTTCTTCT	NA	False	NA	22	True	AATAAA	-31	NA	8821322	8843079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
Isoform_31907_116	chr12	+	3095	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	61	1	-29	-1	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGTGTACTTGTGCA	NA	False	NA	NA	False	AATAAA	-27	NA	8821383	8843714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
Isoform_3191_67	chr10	-	2923	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105344.8	2946	19	-9	32	1	1	multi-exon	FALSE	canonical	3	359	junction_12	261.05737035618	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269480	80245379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_31913_985	chr12	+	1355	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	404	14	404	-14	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTCCTTAAATGTGCC	NA	False	NA	24	True	AATAAA	-15	NA	8972067	8988728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
Isoform_31915_36	chr12	+	1471	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	300	2	300	-2	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTCATGTTTATGC	NA	False	NA	36	True	AATAAA	-27	NA	8971963	8988740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
Isoform_31918_21	chr12	+	1816	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	-45	2	-45	-2	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTCATGTTTATGC	NA	False	NA	36	True	AATAAA	-27	NA	8971618	8988740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
Isoform_31923_3	chr12	+	1999	3	NNC	ENSMUSG00000020583.5	novel	3014	8	NA	NA	0	-18322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAATCAAAAA	NA	False	NA	NA	False	NA	NA	NA	8997928	9003706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_8998252_9001997_9002605_9002637
Isoform_31924_3	chr12	+	4315	28	FSM	ENSMUSG00000066643.13	ENSMUST00000085745.13	4501	28	184	2	17	-1	multi-exon	FALSE	canonical	0	0	junction_10	21.425725854567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGAGTAATGCTGTAG	NA	False	NA	6	True	AATAAA	-13	NA	9024075	9078845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9045639_9045673_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
Isoform_31925_70	chr12	+	3815	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	-15	512	-15	-512	multi-exon	FALSE	canonical	3	49	junction_5	11.1856972283898	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCAGTGGTAGCATGC	NA	False	NA	6	True	AATAAA	-20	NA	9024031	9078334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
Isoform_31929_59	chr12	+	788	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	1	211	1	-211	multi-exon	FALSE	canonical	3	121	junction_2	13	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTATTCCCAACTTTG	NA	False	NA	17	True	AGTAAA	-19	NA	9079997	9086183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_9080197_9084921_9085089_9085761
Isoform_31931_24	chr12	+	1373	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	106	1	106	-1	multi-exon	FALSE	canonical	3	67	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGCATTTCTTTA	NA	False	NA	10	True	AATAAA	-16	NA	10440877	10445561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_10441227_10444537
Isoform_31934_22	chr12	+	1480	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGCATTTCTTTAA	NA	False	NA	11	True	AATAAA	-17	NA	10440771	10445562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_10441227_10444537
Isoform_31938_29	chr12	+	2118	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	-12	1267	-12	-1267	multi-exon	FALSE	canonical	3	624	junction_2	43.5943704599856	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTAATTTTTTTTCA	4548	False	NA	NA	False	NA	NA	NA	11316117	11336388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
Isoform_31946_1000	chr12	+	3841	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	223	1539	4	203	multi-exon	TRUE	canonical	3	574	junction_19	50.8148542090207	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4540	False	NA	14	True	AATAAA	-15	NA	11316109	11368247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
Isoform_31947_144	chr12	+	5379	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	223	1	4	-1	multi-exon	FALSE	canonical	3	574	junction_19	50.8148542090207	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGGTCATGCTTTTGTG	4540	False	NA	NA	False	AATAAA	-22	NA	11316109	11369785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
Isoform_31955_24	chr12	+	3735	26	FSM	ENSMUSG00000020608.8	ENSMUST00000218022.2	5272	26	4	1533	4	203	multi-exon	FALSE	canonical	3	71	junction_3	127.798754297528	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4540	False	NA	14	True	AATAAA	-15	NA	11316109	11368247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
Isoform_31961_122	chr12	+	3611	25	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	11	204	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4547	False	NA	15	True	AATAAA	-16	NA	11316116	11368248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
Isoform_31963_23	chr12	+	5148	25	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTAAGGTCATGCTTTT	4544	False	NA	NA	False	AATAAA	-19	NA	11316113	11369782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
Isoform_31970_6	chr12	+	1418	13	FSM	ENSMUSG00000020589.18	ENSMUST00000069066.14	9452	13	24	8010	-6	-384	multi-exon	FALSE	canonical	3	12	junction_2	32.1829621936135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGATTCAACCCAGCCGA	NA	False	NA	-28	True	AATATA	-21	NA	12312163	12422956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_12312240_12326343_12326417_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
Isoform_31971_6	chr12	+	4815	13	FSM	ENSMUSG00000020589.18	ENSMUST00000069066.14	9452	13	30	4607	0	2963	multi-exon	FALSE	canonical	3	12	junction_2	32.1829621936135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCATGTTTGTATATG	NA	False	NA	NA	False	ATTAAA	-20	NA	12312169	12426359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_12312240_12326343_12326417_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
Isoform_31972_55	chr12	+	1375	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	0	396	0	-340	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGATGTCTGAAGCGAA	NA	False	NA	16	True	CATAAA	-18	NA	12312177	12423000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
Isoform_31974_12	chr12	+	1515	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	-33	289	5	-233	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCTTGTGGTATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	12312144	12423107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
Isoform_31975_38	chr12	+	4735	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	0	-2964	0	2964	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATGTTTGTATATGA	NA	False	NA	NA	False	ATTAAA	-21	NA	12312177	12426360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
Isoform_31976_4	chr12	+	1484	14	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	-5	261850	-5	-7703	5prime_fragment	FALSE	canonical	3	29	junction_4	5.96339921332748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATCATCCACGAGTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	13319128	13371962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645
Isoform_31977_4	chr12	+	1397	14	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	5	261927	5	-7780	5prime_fragment	FALSE	canonical	3	29	junction_4	5.96339921332748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTGTATGTGCTGTAG	NA	False	NA	NA	False	ATTAAA	-20	NA	13319138	13371885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645
Isoform_31978_29	chr12	+	7221	52	FSM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	6	7	6	1	multi-exon	FALSE	canonical	3	21	junction_37	10.8075685101282	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGATGCCCTTTGAGTA	NA	False	NA	NA	False	AATAAA	-21	NA	13319139	13633805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
Isoform_31979_21	chr12	+	7239	52	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-9	1	at_least_one_novel_splicesite	TRUE	canonical	3	26	junction_19	10.6193442780164	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGATGCCCTTTGAGTA	NA	False	NA	NA	False	AATAAA	-21	NA	13319124	13633805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491859_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
Isoform_31981_9	chr12	+	2586	9	ISM	ENSMUSG00000057469.9	ENSMUST00000220794.2	2694	10	-12	12998	-12	-8	5prime_fragment	FALSE	canonical	0	0	junction_1	108.357048686276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATAGTGCTGCGTGCC	7384	False	NA	-4	True	ATTAAA	-7	NA	16860951	16876745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_16861317_16862289_16862374_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
Isoform_31983_331	chr12	+	2490	8	FSM	ENSMUSG00000057469.9	ENSMUST00000221541.2	2362	8	-136	8	0	-8	multi-exon	FALSE	canonical	2	121	junction_1	60.8859757318245	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATAGTGCTGCGTGCC	7396	False	NA	-4	True	ATTAAA	-7	NA	16860963	16876745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
Isoform_31985_14	chr12	+	2346	7	NIC	ENSMUSG00000057469.9	novel	2362	8	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	88.3712182909245	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTGCGTGCCTGTGTT	7398	False	NA	2	True	ATTAAA	-13	NA	16860965	16876751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16875365
Isoform_31988_307	chr12	+	2422	7	FSM	ENSMUSG00000057469.9	ENSMUST00000020908.9	2418	7	-12	8	2	-8	multi-exon	FALSE	canonical	2	127	junction_1	56.1505911713215	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATAGTGCTGCGTGCC	7398	False	NA	-4	True	ATTAAA	-7	NA	16860965	16876745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
Isoform_3199_3	chr10	+	1154	4	Antisense	novelGene_ENSMUSG00000020167.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGATGGCTTCCCCCGAC	NA	False	NA	NA	False	NA	NA	NA	80245430	80251102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_80246109_80248660_80248897_80249038_80249171_80250994
Isoform_31990_18	chr12	+	2286	6	NIC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	-10	-8	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	95.7747357083276	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATAGTGCTGCGTGCC	7386	False	NA	-4	True	ATTAAA	-7	NA	16860953	16876745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16875365
Isoform_31994_5	chr12	+	2183	9	ISM	ENSMUSG00000020580.11	ENSMUST00000220688.2	4357	33	-330	24111	-58	7173	5prime_fragment	FALSE	canonical	3	133	junction_2	21.1468082698075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTCTCAGTGTTTAAG	1977	False	NA	NA	False	AATAAA	-20	NA	16944837	17003992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261
Isoform_31998_52	chr12	+	7692	33	FSM	ENSMUSG00000020580.11	ENSMUST00000020904.8	7644	33	-50	2	-50	-2	multi-exon	FALSE	canonical	1	36	junction_11	41.2749805988749	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTCCTGTGAAATAGTT	1985	False	NA	17	True	AATAAA	-24	NA	16944845	17037822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004969_17005670_17005683_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
Isoform_3200_389	chr10	-	2879	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105346.10	2839	19	-26	-14	0	14	multi-exon	FALSE	canonical	3	458	junction_2	257.439271275891	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269481	80245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_32001_53	chr12	+	6396	33	FSM	ENSMUSG00000020580.11	ENSMUST00000020904.8	7644	33	-50	1298	-50	-1298	multi-exon	FALSE	canonical	1	36	junction_11	41.2749805988749	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGTCAAGTTTACACA	1985	False	NA	NA	False	NA	NA	NA	16944845	17036526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004969_17005670_17005683_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
Isoform_32003_3	chr12	+	7687	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-46	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	50.3004500551876	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTGTGGAATGCTGC	1989	False	NA	29	True	AATAAA	-36	NA	16944849	17037834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000711_17002496_17002589_17003261_17003422_17004907_17004969_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
Isoform_32007_4781	chr12	+	1733	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	-4	396	-4	-396	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	4781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAATGTATGAAATTAG	NA	False	NA	18	True	AATAAA	-20	NA	17316591	17334375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
Isoform_32008_201	chr12	+	2133	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	-6	-2	-6	2	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTGTGATTATCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	17316589	17334773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
Isoform_3201_118	chr10	-	2926	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105346.10	2839	19	-25	-62	1	1	multi-exon	FALSE	canonical	3	458	junction_2	257.439271275891	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269480	80245379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_32038_528	chr12	+	3011	21	FSM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	10	0	10	0	multi-exon	FALSE	canonical	3	221	junction_7	25.2103153490788	528	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTGTTTAGCTTA	NA	False	NA	14	True	AATAAA	-17	NA	17398468	17480096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
Isoform_32052_2603	chr12	+	2028	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	179	1	1	-1	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	2603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCAGGGAATGTTTGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	17594973	17601084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
Isoform_32053_185	chr12	+	2447	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	178	-417	0	-4	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGTAAATCTT	NA	False	NA	19	True	AATAAA	-14	NA	17594972	17601502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
Isoform_32054_658	chr12	+	2087	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	111	10	-67	-3	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTGGGCATCAGGGAA	NA	False	NA	NA	False	AATAAA	-10	NA	17594905	17601075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
Isoform_32056_50	chr12	+	2513	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	112	-417	-66	-4	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGTAAATCTT	NA	False	NA	19	True	AATAAA	-14	NA	17594906	17601502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
Isoform_32083_32	chr12	+	1648	5	NIC	ENSMUSG00000071379.3	novel	1526	4	NA	NA	-46	-10	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	31.8541598539343	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	8578	False	NA	7	True	ATTAAA	-8	NA	17740810	17841924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_17741048_17817214_17817301_17836147_17836550_17837545_17837652_17841107
Isoform_32084_115	chr12	+	1561	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	-45	10	-45	-10	multi-exon	FALSE	canonical	3	71	junction_1	8.52447456836295	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	8579	False	NA	7	True	ATTAAA	-8	NA	17740811	17841924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
Isoform_32086_6	chr12	+	1547	5	FSM	ENSMUSG00000071379.3	ENSMUST00000222944.2	697	5	-45	-805	-45	-2	multi-exon	FALSE	canonical	3	5	junction_1	35.2304910553344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGTGAGTTTCCTGT	NA	False	NA	15	True	AATAAA	-3	NA	17778181	17841932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_17778310_17817214_17817301_17836147_17836550_17837545_17837652_17841107
Isoform_32087_3	chr12	+	1432	4	NIC	ENSMUSG00000071379.3	novel	697	5	NA	NA	-23	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.0412886854702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCAAGGTCTGTGAGT	NA	False	NA	8	True	ATTAAA	-9	NA	17778203	17841925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_17778310_17836147_17836550_17837545_17837652_17841107
Isoform_32089_4	chr12	+	1916	5	Fusion	ENSMUSG00000073197.10_ENSMUSG00000113646.2	novel	547	3	NA	NA	-66	734	multi-exon	FALSE	canonical	0	0	junction_1	3.3166247903554	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	18564444	18827110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_18564865_18802076_18802292_18823494_18823836_18825259_18825366_18826276
Isoform_32090_5	chr12	+	3142	3	Fusion	ENSMUSG00000112970.2_ENSMUSG00000113857.2	novel	575	3	NA	NA	-288	728	intron_retention	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGATCAAATAAACCAAG	NA	False	NA	NA	False	NA	NA	NA	18903583	18962087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_18903999_18955903_18957804_18961260
Isoform_32091_5	chr12	+	3629	4	Fusion	ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-34	756	multi-exon	FALSE	canonical	2	15	junction_3	6.23609564462324	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTGGTTGTTG	NA	False	NA	13	True	AATAAA	-14	NA	19342779	19355948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_19342877_19350884_19351012_19351214_19351276_19352604
Isoform_32092_5	chr12	+	2895	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	-22	18141	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	5.55777733351102	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACACACACACACT	NA	False	NA	NA	False	NA	NA	NA	19437787	19458428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_19438215_19454315_19454443_19454644_19454706_19456148
Isoform_32093_4	chr12	+	2026	4	ISM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-214	67259	-8	1	intron_retention	FALSE	canonical	3	60	junction_3	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAATGTGAGTGTGTT	NA	False	NA	NA	False	GATAAA	-18	NA	21161740	21250921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544
Isoform_32094_14	chr12	+	771	5	ISM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-220	67259	-14	1	5prime_fragment	FALSE	canonical	3	55	junction_4	7.49583217528247	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAATGTGAGTGTGTT	NA	False	NA	NA	False	GATAAA	-18	NA	21161734	21250921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880
Isoform_32098_123	chr12	+	5502	28	NNC	ENSMUSG00000052632.17	novel	5552	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	16.3337952399623	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCATCTGTAAAGT	NA	False	NA	19	True	AATAAA	-15	NA	21161756	21320171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718_21319286_21319317
Isoform_32101_2134	chr12	+	2265	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	13	221	13	0	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	2134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336371	21364836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
Isoform_32103_54	chr12	+	2337	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	-59	221	-59	0	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336299	21364836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
Isoform_32117_9	chr12	+	708	4	FSM	ENSMUSG00000062054.8	ENSMUST00000223345.2	1890	4	-21	1203	4	-621	multi-exon	FALSE	canonical	3	412	junction_2	19.3964487013015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCAATTTTGCTACTC	NA	False	NA	19	True	NA	NA	NA	21366393	21370156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770
Isoform_32119_211	chr12	+	896	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	32	213	7	-213	multi-exon	FALSE	canonical	3	356	junction_4	39.1131691377725	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTCATGATTATTG	NA	False	NA	8	True	ATTAAA	-18	NA	21366421	21373607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
Isoform_3212_135	chr10	-	2880	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020377.13	2842	19	-24	-14	-2	14	multi-exon	FALSE	canonical	3	359	junction_12	305.080706788091	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269479	80245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_32120_9	chr12	+	775	5	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	6	-213	combination_of_known_splicesites	FALSE	canonical	1	8	junction_4	187.52666477064	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTCATGATTATTG	NA	False	NA	8	True	ATTAAA	-18	NA	21366420	21373607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21373289
Isoform_32121_16	chr12	+	863	6	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	7	-214	combination_of_known_splicesites	FALSE	canonical	3	85	junction_2	143.346293987672	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21366421	21373606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_21366514_21367376_21367430_21367930_21368048_21369770_21369933_21371334_21371457_21373289
Isoform_32122_18	chr12	+	470	5	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAAAGGCGTTTTTTTT	6093	False	NA	NA	False	ACTAAA	-20	NA	21593300	21604524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
Isoform_32123_13	chr12	+	633	5	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-9	163	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTATCTTCTGTCTTAG	6091	False	NA	NA	False	ATTAAA	-15	NA	21593298	21604685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
Isoform_32124_269	chr12	+	1989	15	FSM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	218	2	-34	-2	multi-exon	FALSE	canonical	3	207	junction_4	28.2355254592363	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACACCTGGAAACTTGC	NA	False	NA	10	True	ATTAAA	-19	NA	24548575	24608536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
Isoform_32125_3	chr12	+	4551	14	NIC	ENSMUSG00000059669.9	novel	2209	15	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	207	junction_4	29.0056105570454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACACCTGGAAACTTG	NA	False	NA	9	True	ATTAAA	-18	NA	24548606	24608535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
Isoform_32127_4	chr12	+	1896	14	FSM	ENSMUSG00000059669.9	ENSMUST00000221372.2	1840	14	-52	-4	-33	4	multi-exon	FALSE	canonical	3	45	junction_3	59.0833329855924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGAAACTTGCATTCAT	NA	False	NA	16	True	ATTAAA	-25	NA	24548576	24608542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
Isoform_32132_5	chr12	+	956	4	ISM	ENSMUSG00000020656.17	ENSMUST00000221426.2	3267	9	-4	15048	0	-15048	5prime_fragment	FALSE	canonical	3	20	junction_2	3.29983164553722	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGAAAGGCCTGTAGGT	NA	False	NA	NA	False	AATAAA	-13	NA	24622281	24631848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326
Isoform_32133_4	chr12	+	2612	4	ISM	ENSMUSG00000020656.17	ENSMUST00000221426.2	3267	9	-29	13417	-25	-13417	intron_retention	FALSE	canonical	3	20	junction_2	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCAGGATTCCATTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	24622256	24633479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326
Isoform_32134_4	chr12	+	1102	5	NIC	ENSMUSG00000020656.17	novel	3267	9	NA	NA	-14	-12330	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	7.36121593216773	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGCGTGCTTTGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	24622267	24634566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24631718_24634303
Isoform_32135_8	chr12	+	3389	15	NIC	ENSMUSG00000020656.17	novel	3469	16	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	6.88869230207396	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTGTCGGCTCCTGTT	NA	False	NA	NA	False	TTTAAA	-32	NA	24622283	24667386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24631718_24634303_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24658027_24658080_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
Isoform_32137_623	chr12	+	3962	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	114	10	114	-10	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTGAGTGATGTGTT	NA	False	NA	8	True	TATAAA	-19	NA	24701386	24712778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
Isoform_32142_9	chr12	+	4067	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	14	5	14	-5	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTGATGTGTTATATA	NA	False	NA	13	True	TATAAA	-24	NA	24701286	24712783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
Isoform_32161_12188	chr12	+	2112	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	43	38	43	-38	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	12188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGTATTAAATGATTTA	NA	False	NA	34	True	AATAAA	-34	NA	24758282	24764107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
Isoform_32162_700	chr12	+	2140	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	10	43	10	-43	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCATACAAGTATTAAATG	NA	False	NA	29	True	AATAAA	-29	NA	24758249	24764102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
Isoform_3220_120	chr10	-	2930	19	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	458	junction_2	272.362803836317	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269481	80245379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_32209_131	chr12	+	2826	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-48	-427	-34	-4	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTTAGATTCTATCTA	NA	False	NA	NA	False	ATTAAA	-27	NA	24881573	25010300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
Isoform_3221_447	chr10	-	2910	19	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-28	14	combination_of_known_junctions	FALSE	canonical	3	458	junction_2	272.362803836317	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269509	80245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_32215_12	chr12	+	6940	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-70	-4519	-56	-4	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAACCTGTGTTTGTGT	NA	False	NA	NA	False	ATTAAA	-10	NA	24881551	25014392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
Isoform_32217_26	chr12	+	2734	12	FSM	ENSMUSG00000020646.18	ENSMUST00000221952.2	6792	12	-34	4092	-34	0	multi-exon	FALSE	canonical	3	26	junction_3	37.4053074415034	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATTCTATCTAAACA	NA	False	NA	NA	False	ATTAAA	-31	NA	24881573	25010304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
Isoform_32221_4	chr12	+	2652	11	NIC	ENSMUSG00000020646.18	novel	6792	12	NA	NA	-40	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.1230539746591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGGGTGTTAGATTC	NA	False	NA	NA	False	ATTAAA	-21	NA	24881567	25010294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_24881774_24928189_24928336_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
Isoform_32222_4	chr12	+	2450	9	NIC	ENSMUSG00000020646.18	novel	2467	10	NA	NA	-38	-8	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	45.2493093869951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGTGTTAGATTCTA	NA	False	NA	NA	False	ATTAAA	-23	NA	24881569	25010296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_24881774_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
Isoform_32224_31	chr12	+	7053	29	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	4	-225	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	8.28017055922134	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCACGGAGTTTTA	NA	False	NA	4	True	AATAAA	-14	NA	25024931	25109471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
Isoform_32225_5	chr12	+	6938	28	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	4	-226	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	11.3298227436232	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGACTCACGGAGTTTT	NA	False	NA	3	True	AATAAA	-13	NA	25024931	25109470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25101093_25101226_25102795_25102895_25103796_25104034_25106580
Isoform_32229_3	chr12	+	3189	5	FSM	ENSMUSG00000020638.9	ENSMUST00000020969.5	3200	5	10	1	10	-1	multi-exon	FALSE	canonical	2	4	junction_3	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTTCGTCATCATTGC	NA	False	NA	NA	False	AATAAA	-19	NA	26519212	26529835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_26520026_26521404_26521520_26523994_26524197_26527004_26527239_26528010
Isoform_32232_354	chr12	+	1431	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	25	-1	3	1	multi-exon	FALSE	canonical	3	155	junction_3	35.1318217284442	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATCTAGTTTGAGTTAC	NA	False	NA	14	True	AATAAA	-22	NA	28699625	28709589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
Isoform_32234_22	chr12	+	1435	8	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	-7	-1	combination_of_known_splicesites	TRUE	canonical	3	22	junction_5	81.9245546406035	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATCTAGTTTGAGTT	NA	False	NA	12	True	AATAAA	-20	NA	28699615	28709587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707635_28707717_28708169_28708295_28708991
Isoform_32236_6	chr12	+	3794	7	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	224	junction_2	15.4775823549919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATCTAGTTTGAGTT	NA	False	NA	12	True	AATAAA	-20	NA	28699620	28709587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_28699816_28702023_28702140_28703061_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
Isoform_32239_6	chr12	+	2540	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-893	5	-893	-5	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTTGGTCTCTCGAGA	NA	False	NA	10	True	NA	NA	NA	28724336	28732169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
Isoform_32240_301	chr12	+	1652	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-2	2	-2	-2	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTCTCTCGAGAGTT	NA	False	NA	13	True	NA	NA	NA	28725227	28732172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
Isoform_32241_103	chr12	+	1674	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-24	2	-24	-2	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTCTCTCGAGAGTT	NA	False	NA	13	True	NA	NA	NA	28725205	28732172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
Isoform_32246_11	chr12	+	1790	10	FSM	ENSMUSG00000036613.9	ENSMUST00000035657.9	1747	10	-43	0	9	0	multi-exon	FALSE	canonical	2	6	junction_3	106.926188918072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGCTCTTTGTTTGTTTT	1107	False	NA	7	True	NA	NA	NA	28801810	28917490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28843853_28843936_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
Isoform_32247_409	chr12	+	1680	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	37	2374	1	0	multi-exon	FALSE	canonical	3	234	junction_3	17.1641887370187	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGCTCTTTGTTTGTTTT	1135	False	NA	7	True	NA	NA	NA	28801838	28917490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
Isoform_32248_150	chr12	+	2931	6	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	23	4	at_least_one_novel_splicesite	FALSE	non_canonical	3	92	junction_5	34.3941855551196	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30634447	30641218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650_30640574_30640594
Isoform_32252_6	chr12	+	4538	5	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	23	2	intron_retention	FALSE	non_canonical	3	92	junction_4	37.7392368762274	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACAGTGTGCTTTCGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	30634447	30641216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_30634562_30635468_30637254_30638472_30638567_30638650_30640574_30640594
Isoform_32253_7	chr12	+	5443	4	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	23	0	intron_retention	FALSE	non_canonical	3	92	junction_3	42.8978113919839	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30634447	30641214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_30637254_30638472_30638567_30638650_30640574_30640594
Isoform_32254_81	chr12	+	1711	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	34	5	10	1	multi-exon	FALSE	canonical	3	40	junction_1	6.36153564813317	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTACTTTGTGTTCAC	8073	False	NA	11	True	AATAAA	-19	NA	30961700	31010156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
Isoform_32257_5	chr12	+	2683	2	FSM	ENSMUSG00000036136.10	ENSMUST00000041133.10	3088	2	92	313	92	-313	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTAGTCCTCAGGTGTTT	NA	False	NA	NA	False	TATAAA	-17	NA	31123951	31129937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_31125322_31128624
Isoform_32259_33	chr12	+	5635	34	FSM	ENSMUSG00000002900.18	ENSMUST00000169088.8	5557	34	67	-145	4	-1	multi-exon	FALSE	canonical	3	20	junction_1	26.2601941375773	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATCCTATGTTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	31315299	31379637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_31315344_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
Isoform_32261_117	chr12	+	5772	33	FSM	ENSMUSG00000002900.18	ENSMUST00000239496.2	5778	33	7	-1	4	1	multi-exon	FALSE	canonical	3	88	junction_13	20.6626313894794	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCCTATGTTTCTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	31315299	31379639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
Isoform_32264_39	chr12	+	5813	33	FSM	ENSMUSG00000002900.18	ENSMUST00000002979.16	5784	33	-31	2	28	-2	multi-exon	FALSE	canonical	3	88	junction_13	20.6626313894794	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATGTTTCTTTTATT	NA	False	NA	NA	False	AATAAA	-21	NA	31315260	31379641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
Isoform_3227_168	chr10	-	2885	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105342.8	2928	19	-4	47	0	14	multi-exon	FALSE	canonical	3	359	junction_12	316.935193165206	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269481	80245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_32284_33	chr12	+	5803	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	16	8563	16	-2	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGCAAGCCAAGTA	NA	False	NA	9	True	AATAAA	-15	NA	31704883	31979066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
Isoform_32286_6	chr12	+	6526	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	-15	7871	-15	667	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAACCCAAACTG	NA	False	NA	NA	False	AATAAA	-17	NA	31704852	31979758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
Isoform_32288_38	chr12	+	2984	23	FSM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	11	2	11	-2	multi-exon	FALSE	canonical	3	25	junction_22	24.2086317506725	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTGTTTCTTCCTTC	NA	False	NA	10	True	AATAAA	-17	NA	31704878	31987627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
Isoform_32290_9	chr12	+	1143	5	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	245768	2	6516	-2	3prime_fragment	FALSE	canonical	3	25	junction_4	29.4819860253681	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTGTTTCTTCCTTC	1038	False	NA	10	True	AATAAA	-17	NA	31950635	31987627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
Isoform_32291_35	chr12	+	2709	11	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	7	-1741	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	260.465371978695	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	False	NA	14	True	ATTAAA	-18	NA	32870340	32901607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
Isoform_32292_30	chr12	+	4489	11	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	-12	20	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	260.465371978695	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATTGTGTGTATCAG	NA	False	NA	13	True	AATAAA	-38	NA	32870321	32903368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
Isoform_32296_540	chr12	+	2800	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	-14	1741	-14	-1741	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	False	NA	14	True	ATTAAA	-18	NA	32870319	32901607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
Isoform_32299_885	chr12	+	2255	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	22	2250	22	-2250	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTGTGGTGTTGTAC	NA	False	NA	13	True	AATAAA	-16	NA	32870355	32901098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
Isoform_32301_388	chr12	+	4506	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	41	-20	41	20	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATTGTGTGTATCAG	NA	False	NA	13	True	AATAAA	-38	NA	32870374	32903368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
Isoform_3231_121	chr10	-	2640	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-2	13	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	294.083868648568	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	NA	False	NA	-1	True	TATAAA	-27	NA	80269479	80245428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_32326_340	chr12	+	1990	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	30	-1	30	1	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGAATGCCCCGTTG	8455	False	NA	NA	False	AATAAA	-8	NA	33004212	33026904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
Isoform_32328_92	chr12	+	4106	6	NNC	ENSMUSG00000020570.16	novel	4999	6	NA	NA	24	-824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	117.014529012426	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATTTAAGATTATACTTA	8449	False	NA	NA	False	NA	NA	NA	33004206	33029035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588_33027367_33027387
Isoform_32334_14	chr12	+	4593	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	30	-2604	30	-352	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCTTGTTTGACTCTGC	8455	False	NA	25	True	ATTAAA	-25	NA	33004212	33029507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
Isoform_32335_23	chr12	+	4163	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	3	-2147	3	-809	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGCCTCAAGAATTTTC	8428	False	NA	NA	False	NA	NA	NA	33004185	33029050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
Isoform_32339_3	chr12	+	1659	5	NNC	ENSMUSG00000020564.18	novel	1675	4	NA	NA	8	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	5.31507290636732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCTGTACATTGAGTC	NA	False	NA	NA	False	NA	NA	NA	33197699	33301146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849_33300196_33300222
Isoform_32340_4	chr12	+	1618	4	FSM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	67	-10	4	10	multi-exon	FALSE	canonical	2	8	junction_2	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGAGTCCTTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	33197776	33301155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849
Isoform_32341_25	chr12	+	464	4	FSM	ENSMUSG00000020562.8	ENSMUST00000020878.8	673	4	211	-2	211	2	multi-exon	FALSE	canonical	3	39	junction_3	13.0213499897497	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTCTGGTTTCATT	NA	False	NA	6	True	AATAAA	-16	NA	33445063	33451268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33445198_33448277_33448443_33448546_33448635_33451191
Isoform_32342_570	chr12	+	2341	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	0	1984	0	1693	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCTTTCCCTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	33479633	33489407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
Isoform_32343_17	chr12	+	2409	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-69	1985	-69	1692	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTTGTCTTTCCCTCC	NA	False	NA	NA	False	AATAAA	-13	NA	33479564	33489406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
Isoform_32351_52	chr12	+	3398	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-19	946	-19	-946	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTTGAATTTATAATTT	NA	False	NA	2	True	AATAAA	-14	NA	33479614	33490445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
Isoform_32352_55	chr12	+	3204	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	0	1121	0	-1121	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAATTTATTTT	NA	False	NA	3	True	AGTAAA	-13	NA	33479633	33490270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
Isoform_32353_44	chr12	+	3511	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-19	833	-19	-833	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACTAAATTCTCACA	NA	False	NA	NA	False	AATAAA	-10	NA	33479614	33490558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
Isoform_32368_9	chr12	+	1496	2	FSM	ENSMUSG00000035799.7	ENSMUST00000049089.7	1628	2	138	-6	138	6	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGGTCTATATTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	34007807	34009834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_34008638_34009168
Isoform_32369_4	chr12	+	1170	7	FSM	ENSMUSG00000020590.17	ENSMUST00000222101.2	1145	7	-24	-1	7	1	multi-exon	TRUE	canonical	3	96	junction_3	5.7373048260195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTGTTTAATTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	35097191	35141968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567
Isoform_32371_4	chr12	+	4234	26	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	7	69	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	18.4266763145175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTTGGTGTATACAT	NA	False	NA	NA	False	AATAAA	-12	NA	35097191	35195455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
Isoform_32374_5	chr12	+	2509	20	ISM	ENSMUSG00000020590.17	ENSMUST00000163677.3	3681	23	8	9904	8	1791	5prime_fragment	FALSE	canonical	3	72	junction_14	10.4624377598204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTACATGGACTACTT	NA	False	NA	NA	False	NA	NA	NA	35097192	35174778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428
Isoform_32377_46	chr12	+	4199	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	9	2023	9	69	multi-exon	FALSE	canonical	3	72	junction_14	10.0218960281975	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTTGGTGTATACAT	NA	False	NA	NA	False	AATAAA	-12	NA	35097193	35195455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
Isoform_32379_3	chr12	+	4115	25	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	7	72	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	21.6735565968199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGGTGTATACATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	35097191	35195458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
Isoform_32380_521	chr12	+	2436	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	20	0	20	0	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGTTTCATAATTCGT	NA	False	NA	21	True	AATAAA	-20	NA	36207132	36247290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
Isoform_32385_5	chr12	+	1813	10	FSM	ENSMUSG00000043153.7	ENSMUST00000062041.6	2690	10	28	849	-7	3	multi-exon	FALSE	canonical	3	10	junction_5	4.59468291736341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAATCTGTTCACTACT	NA	False	NA	NA	False	AATAAA	-21	NA	36431545	36738594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698_36526745_36551976_36552072_36571431_36571522_36571957_36572051_36597827_36597960_36738247
Isoform_32386_6	chr12	+	2684	10	FSM	ENSMUSG00000043153.7	ENSMUST00000062041.6	2690	10	65	-59	1	0	multi-exon	FALSE	canonical	3	10	junction_5	4.59468291736341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAATGCGTTACATTT	NA	False	NA	NA	False	AATAAA	-30	NA	36431582	36739502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698_36526745_36551976_36552072_36571431_36571522_36571957_36572051_36597827_36597960_36738247
Isoform_32389_8	chr12	+	3137	13	FSM	ENSMUSG00000004151.18	ENSMUST00000095767.11	6576	13	234	3205	-3	-20	multi-exon	FALSE	non_canonical	0	0	junction_8	7.23225798458238	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTCTGCCTTGTTTTC	559	False	NA	NA	False	NA	NA	NA	38830314	38917278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
Isoform_3239_87	chr10	-	2645	18	NIC	ENSMUSG00000020167.15	novel	2826	19	NA	NA	1	14	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	308.377436915569	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269480	80245427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_32390_8	chr12	+	3143	13	FSM	ENSMUSG00000004151.18	ENSMUST00000095767.11	6576	13	223	3210	-14	-25	multi-exon	FALSE	non_canonical	0	0	junction_8	7.23225798458238	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGTTTCTGCCTTG	548	False	NA	NA	False	NA	NA	NA	38830303	38917273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
Isoform_32391_4	chr12	+	3340	13	FSM	ENSMUSG00000004151.18	ENSMUST00000095767.11	6576	13	31	3205	31	-20	multi-exon	FALSE	non_canonical	0	0	junction_8	7.23225798458238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTCTGCCTTGTTTTC	356	False	NA	NA	False	NA	NA	NA	38830111	38917278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
Isoform_32392_3	chr12	+	3078	12	ISM	ENSMUSG00000004151.18	ENSMUST00000162563.8	1865	14	510	-1493	-54	-27	3prime_fragment	FALSE	non_canonical	0	0	junction_7	7.20881003694509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCAAAGTTTCTGCCT	1037	False	NA	NA	False	NA	NA	NA	38830792	38917271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
Isoform_32398_152	chr12	+	3240	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	40	10227	21	-38	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCATTTTAACGTTTGTA	NA	False	NA	25	True	AATAAA	-30	NA	44315970	44359088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
Isoform_32400_136	chr12	+	3430	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	40	10037	21	2	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGGTGTATATCCTTT	NA	False	NA	NA	False	NA	NA	NA	44315970	44359278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
Isoform_32402_29	chr12	+	4402	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	7	9098	7	941	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCGGAGTTGTCTGTAG	NA	False	NA	NA	False	AATAAA	-30	NA	44315937	44360217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
Isoform_32407_6	chr12	+	3495	10	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	85.0700510182456	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAAGGTGTATATCCTT	NA	False	NA	NA	False	NA	NA	NA	44315937	44359277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354931_44358107
Isoform_32411_3	chr12	+	3619	16	FSM	ENSMUSG00000035293.14	ENSMUST00000119211.8	2926	16	1	-694	1	-116	multi-exon	FALSE	canonical	3	11	junction_11	51.696120636745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGGCACGACATCACT	NA	False	NA	NA	False	AATAAA	-22	NA	51395071	51420744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51410734_51410804_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
Isoform_32415_5	chr12	+	3380	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	210	3213	-17	-304	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATGACAGGGTCTT	NA	False	NA	NA	False	TATAAA	-22	NA	51395053	51420556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
Isoform_32418_127	chr12	+	6558	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	239	6	12	-6	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCGATGTGAGATTT	NA	False	NA	11	True	AATAAA	-12	NA	51395082	51423763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
Isoform_32419_5	chr12	+	6794	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	10	-1	10	1	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTGAGATTTATTTCAT	NA	False	NA	18	True	AATAAA	-19	NA	51394853	51423770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
Isoform_32420_5	chr12	+	4911	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	210	1682	-17	1227	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGAATTTATATTATC	NA	False	NA	NA	False	ATTAAA	-17	NA	51395053	51422087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
Isoform_32423_8	chr12	+	6259	14	NIC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	42.4542914662973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATGTGAGATTTATTTCA	NA	False	NA	17	True	AATAAA	-18	NA	51395082	51423769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51414557_51414740_51415828_51416002_51418342_51418534_51419212
Isoform_32429_407	chr12	+	2090	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	2	4	1	3	multi-exon	FALSE	canonical	3	358	junction_5	42.0133700610757	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACAGCTTATTCTTGTT	NA	False	NA	11	True	AATAAA	-11	NA	51424364	51496880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
Isoform_32431_19	chr12	+	2759	14	FSM	ENSMUSG00000020952.11	ENSMUST00000219434.2	2749	14	-6	-4	-6	4	multi-exon	TRUE	canonical	3	21	junction_13	120.151925523899	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTTTTAAGATTTATT	NA	False	NA	NA	False	ATTAAA	-19	NA	51424356	51464002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462405
Isoform_32435_5	chr12	+	2497	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	-32	-9	-16	-1	multi-exon	TRUE	canonical	0	0	junction_1	2.34608870919344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACACTAGTGTTTTTCC	NA	False	NA	NA	False	AATAAA	-26	NA	51640107	51652553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
Isoform_32436_6	chr12	+	2031	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	-10	435	6	-435	multi-exon	FALSE	canonical	0	0	junction_1	2.34608870919344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGTTCCCTCTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	51640129	51652109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
Isoform_32437_29	chr12	+	1053	6	FSM	ENSMUSG00000020955.10	ENSMUST00000021338.10	1035	6	-19	1	-15	-1	multi-exon	FALSE	canonical	3	33	junction_1	14.8458748479165	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTGACGTTTGAGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	51737800	51785714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51777670_51777683_51785335
Isoform_32440_215	chr12	+	1192	11	FSM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	19	1776	0	-1776	multi-exon	FALSE	canonical	3	215	junction_4	16.265300489078	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGATTCTGTATTTGG	NA	False	NA	19	True	AATAAA	-28	NA	52144538	52357751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
Isoform_32448_44	chr12	+	7030	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-1	818	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTACACTGACTTGT	NA	False	NA	8	True	ATTAAA	-17	NA	52550797	52616436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32449_4	chr12	+	7140	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-67	818	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTACACTGACTTGT	NA	False	NA	8	True	ATTAAA	-17	NA	52550687	52616436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32451_4	chr12	+	6697	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-65	377	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTTTCTAGGTTGCTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	52550689	52615995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32456_14	chr12	+	7045	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-19	818	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	115.531741670129	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTACACTGACTTGT	NA	False	NA	8	True	ATTAAA	-17	NA	52550779	52616436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52550832_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32457_17	chr12	+	6231	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	115.531741670129	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCCTAAGAGTTTGATT	NA	False	NA	9	True	AGTAAA	-20	NA	52550779	52615622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52550832_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32460_39	chr12	+	6491	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGCTCCTAAGAGTTT	NA	False	NA	5	True	AGTAAA	-16	NA	52550857	52615618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32461_23	chr12	+	7340	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	28	818	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTACACTGACTTGT	NA	False	NA	8	True	ATTAAA	-17	NA	52550826	52616436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32469_7	chr12	+	7119	7	NNC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	-79	819	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	122.471311833516	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTACACTGACTTGTG	NA	False	NA	9	True	ATTAAA	-18	NA	52551045	52616437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52551171_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32470_4	chr12	+	6513	7	NNC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	122.471311833516	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCTCCTAAGAGTTTG	NA	False	NA	6	True	AGTAAA	-17	NA	52550833	52615619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52551171_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32471_6	chr12	+	7307	7	NNC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	59	819	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	122.471311833516	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTACACTGACTTGTG	NA	False	NA	9	True	ATTAAA	-18	NA	52550857	52616437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52551171_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_32482_347	chr12	+	2137	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	272	2089	8	387	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	2848	False	NA	NA	False	AATAAA	-18	NA	55127318	55160063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
Isoform_32483_29	chr12	+	2451	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	-42	2089	-42	387	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	2534	False	NA	NA	False	AATAAA	-18	NA	55127004	55160063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
Isoform_32484_13	chr12	+	2553	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	272	1673	8	803	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTTGGTTCATTGAT	2848	False	NA	NA	False	ATTAAA	-16	NA	55127318	55160479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
Isoform_32485_22	chr12	+	2393	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	272	1833	8	643	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGTGGTCCTTGATTGT	2848	False	NA	NA	False	NA	NA	NA	55127318	55160319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
Isoform_32490_20	chr12	+	1401	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	10	2511	10	-2511	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTGGATTTCCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55171263	55186378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
Isoform_32491_3	chr12	+	1468	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	-53	2507	-53	-2507	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGATTTCCTTTTGTTG	NA	False	NA	NA	False	AATAAA	-19	NA	55171200	55186382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
Isoform_32493_4	chr12	+	3859	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	-19	23	-19	-23	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55246357	55263930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
Isoform_32494_37	chr12	+	2193	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	216	1237	-50	-1237	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGTTCGTTAACTTTC	2570	False	NA	NA	False	AATAAA	-16	NA	55202104	55235121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_32495_807	chr12	+	2137	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	274	1235	8	-1235	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	2628	False	NA	NA	False	AATAAA	-18	NA	55202162	55235123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_32496_54	chr12	+	2413	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	254	979	-12	-979	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGTGGTCCTTGATTGT	2608	False	NA	NA	False	NA	NA	NA	55202142	55235379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_32497_23	chr12	+	2427	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	-17	1236	-17	-1236	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTTCGTTAACTTTCT	2337	False	NA	NA	False	AATAAA	-17	NA	55201871	55235122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_32498_22	chr12	+	2556	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	274	816	8	-816	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGGTTCATTGATAAC	2628	False	NA	NA	False	ATTAAA	-19	NA	55202162	55235542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_32502_28	chr12	+	1371	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	-19	2511	-19	-2511	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTGGATTTCCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55246357	55261442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
Isoform_32505_124	chr12	+	2135	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	274	1233	274	-417	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGTTCGTTAACTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55277226	55309388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_32508_19	chr12	+	2445	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	-34	1231	-34	-415	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	55276918	55309390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_32509_11	chr12	+	2391	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	274	977	274	-161	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTCGTGGTCCTTGATT	NA	False	NA	NA	False	NA	NA	NA	55277226	55309644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_32510_8	chr12	+	2554	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	273	815	273	1	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTTGGTTCATTGAT	NA	False	NA	NA	False	ATTAAA	-16	NA	55277225	55309806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_32512_11	chr12	+	2454	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	211	977	211	-161	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTCGTGGTCCTTGATT	NA	False	NA	NA	False	NA	NA	NA	55277163	55309644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_32515_11	chr12	+	2474	16	Fusion	ENSMUSG00000112368.2_ENSMUSG00000079108.7	novel	3642	16	NA	NA	274	614	multi-exon	FALSE	canonical	3	11	junction_15	308.573376831004	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTGTGGATTTCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	55277226	55326113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55325297
Isoform_32517_17	chr12	+	2206	8	NIC	ENSMUSG00000021023.15	novel	2250	8	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	145.251365513972	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAGTTTAGTTGGTTT	NA	False	NA	15	True	AATAAA	-16	NA	55350055	55429277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_55350123_55350400_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
Isoform_32518_265	chr12	+	2485	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	634	3	10	-3	multi-exon	FALSE	canonical	3	113	junction_3	136.205726751851	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTTTAGTTGGTTTT	NA	False	NA	16	True	AATAAA	-17	NA	55350055	55429278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
Isoform_32520_23	chr12	+	2999	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	119	4	6	-4	multi-exon	FALSE	canonical	3	113	junction_3	136.205726751851	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAGTTTAGTTGGTTT	NA	False	NA	15	True	AATAAA	-16	NA	55349540	55429277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
Isoform_32526_2842	chr12	+	977	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	63	2	43	-2	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	2842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCGGTGCATCCTGTCT	NA	False	NA	14	True	AATAAA	-15	NA	55445622	55465237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
Isoform_32527_102	chr12	+	1018	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	22	2	2	-2	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCGGTGCATCCTGTCT	NA	False	NA	14	True	AATAAA	-15	NA	55445581	55465237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
Isoform_32536_4	chr12	+	2566	9	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	56	2071	10	1682	5prime_fragment	FALSE	canonical	3	160	junction_3	21.242645786248	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	55883164	55914450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735
Isoform_32538_281	chr12	+	2554	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	55	0	9	0	multi-exon	FALSE	canonical	3	160	junction_3	20.0277585143997	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTTGTGTGTTAC	NA	False	NA	2	True	AATAAA	-20	NA	55883163	55916521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
Isoform_32539_84	chr12	+	2607	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	2	0	2	0	multi-exon	FALSE	canonical	3	160	junction_3	20.0277585143997	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTTGTGTGTTAC	NA	False	NA	2	True	AATAAA	-20	NA	55883110	55916521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
Isoform_3254_3	chr10	-	2063	8	NIC	ENSMUSG00000003341.10	novel	4412	28	NA	NA	12772	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	2.71052370871575	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCACTCCTTCTCCAAC	NA	False	NA	NA	False	AATAAA	-31	NA	80362152	80355424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80356297_80357603_80357732_80357844_80357984_80360162_80360247_80361011_80361236_80361321_80361689_80361817_80361918_80362003
Isoform_32544_466	chr12	+	3970	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	35	-2285	35	2285	multi-exon	FALSE	canonical	3	317	junction_1	0	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTCTATGTTTTGTTTGC	NA	False	NA	15	True	ATTAAA	-19	NA	57277232	57288953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_57277398_57285148
Isoform_32546_62	chr12	+	3991	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	13	-2284	13	2284	multi-exon	FALSE	canonical	3	317	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTCTATGTTTTGTTTG	NA	False	NA	14	True	ATTAAA	-18	NA	57277210	57288952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_57277398_57285148
Isoform_32557_39	chr12	+	2123	11	FSM	ENSMUSG00000047022.19	ENSMUST00000123498.8	2117	11	-8	2	2	-2	multi-exon	FALSE	canonical	3	41	junction_10	14.6659469520382	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTGGTATTTTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	57277223	57543983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
Isoform_32564_189	chr12	+	1010	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	52	526	-9	57	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGAAATGTCTGTG	NA	False	NA	5	True	AATATA	-16	NA	59060230	59074730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_32566_148	chr12	+	1470	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	52	66	-9	5	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGAAATGGCAAATC	NA	False	NA	NA	False	AATAAA	-32	NA	59060230	59075190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_32569_121	chr12	+	1063	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	-1	526	-1	57	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGAAATGTCTGTG	NA	False	NA	5	True	AATATA	-16	NA	59060177	59074730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_32571_99	chr12	+	1524	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	-2	66	-2	5	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGAAATGGCAAATC	NA	False	NA	NA	False	AATAAA	-32	NA	59060176	59075190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_32574_12	chr12	+	1588	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	-1	1	-1	-1	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTTTAGTTTAATTTCA	NA	False	NA	NA	False	TTTAAA	-5	NA	59060177	59075255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_32581_23	chr12	+	2245	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-9	58	intron_retention	FALSE	canonical	1	279	junction_3	170.872028138019	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTGAAATGTCTGTGA	NA	False	NA	6	True	AATATA	-17	NA	59060230	59074731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_32582_18	chr12	+	2704	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-9	5	intron_retention	FALSE	canonical	1	279	junction_3	170.872028138019	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGAAATGGCAAATC	NA	False	NA	NA	False	AATAAA	-32	NA	59060230	59075190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_32596_59	chr12	+	3416	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	64	5	5	-5	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAACAAATATCTTC	NA	False	NA	4	True	ATTAAA	-38	NA	59113733	59120779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_32598_229	chr12	+	3262	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	81	142	1	-142	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTTTAAAATTAGTACT	NA	False	NA	11	True	AATAAA	-17	NA	59113750	59120642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_32599_60	chr12	+	3367	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	40	78	2	-78	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTAACATTGTAGTT	NA	False	NA	33	True	ATTAAA	-36	NA	59113709	59120706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_32613_23	chr12	+	3342	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	3	140	3	-140	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTAAAATTAGTACTTG	NA	False	NA	13	True	AATAAA	-19	NA	59113672	59120644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_3263_598	chr10	-	4501	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	14	735	14	4	multi-exon	FALSE	canonical	3	315	junction_13	35.2049393566022	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9435	False	NA	-1	True	AATAAA	-18	NA	80397380	80377493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
Isoform_32636_286	chr12	+	2829	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	196	1409	1	1	multi-exon	FALSE	canonical	3	371	junction_5	45.1017752679996	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTGGTATTAAT	NA	False	NA	8	True	AATAAA	-16	NA	59178267	59236960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_32637_162	chr12	+	2855	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	169	1410	2	0	multi-exon	FALSE	canonical	3	371	junction_5	45.1017752679996	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178240	59236959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_32643_29	chr12	+	2784	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	2	-1	2	1	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTGGTATTAAT	NA	False	NA	8	True	AATAAA	-16	NA	59178240	59236960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_32644_69	chr12	+	2757	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	29	-1	1	1	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTGGTATTAAT	NA	False	NA	8	True	AATAAA	-16	NA	59178267	59236960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_32650_8	chr12	+	2968	5	FSM	ENSMUSG00000047227.6	ENSMUST00000058135.6	1468	5	-71	-1429	-71	1428	multi-exon	FALSE	canonical	3	22	junction_3	5.11737237261468	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGTCTCCCAGCTTCT	NA	False	NA	NA	False	AATAAA	-23	NA	64964608	64972794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_64964966_64967578_64968104_64969098_64969189_64970280_64970416_64970933
Isoform_32653_9	chr12	+	6561	21	FSM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	-175	0	-39	0	multi-exon	FALSE	canonical	2	3	junction_8	35.8941499411812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	False	NA	9	True	AATAAA	-17	NA	65012538	65069347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65037714_65037865_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
Isoform_32656_10	chr12	+	6412	20	FSM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-40	0	-40	0	multi-exon	FALSE	canonical	3	16	junction_14	35.155846142648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	False	NA	9	True	AATAAA	-17	NA	65012537	65069347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
Isoform_32659_17	chr12	+	3170	17	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	147.664950140512	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7511	False	NA	23	True	AATAAA	-20	NA	65083110	65108933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32660_6	chr12	+	4396	17	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	147.664950140512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	7511	False	NA	7	True	AATAAA	-15	NA	65083110	65110159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32663_27	chr12	+	3071	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	137.107192452556	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7511	False	NA	24	True	AATAAA	-21	NA	65083110	65108934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32666_16	chr12	+	3270	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	0	intron_retention	TRUE	canonical	3	68	junction_3	136.140842104377	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7511	False	NA	20	True	AATAAA	-17	NA	65083110	65108930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32667_10	chr12	+	3174	15	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	4	intron_retention	FALSE	canonical	3	68	junction_3	119.000450179221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7511	False	NA	24	True	AATAAA	-21	NA	65083110	65108934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32668_8	chr12	+	3001	15	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	128.051189540969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7511	False	NA	23	True	AATAAA	-20	NA	65083110	65108933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32672_16	chr12	+	2937	15	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	88	junction_9	116.631658984819	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7511	False	NA	22	True	AATAAA	-19	NA	65083110	65108932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32676_170	chr12	+	2838	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	4	1227	3	3	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7511	False	NA	23	True	AATAAA	-20	NA	65083110	65108933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32677_60	chr12	+	4065	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	4	0	3	0	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7511	False	NA	8	True	AATAAA	-16	NA	65083110	65110160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32679_6	chr12	+	2833	14	NIC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	35	junction_10	117.539921456902	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7510	False	NA	20	True	AATAAA	-17	NA	65083109	65108930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104505_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32680_13	chr12	+	3458	15	FSM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	3	-4	3	3	multi-exon	FALSE	canonical	3	88	junction_9	125.885678620058	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7511	False	NA	23	True	AATAAA	-20	NA	65083110	65108933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32682_9	chr12	+	3356	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	89	junction_3	99.633945404782	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7510	False	NA	20	True	AATAAA	-17	NA	65083109	65108930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32683_5	chr12	+	3678	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	3	intron_retention	FALSE	canonical	3	89	junction_3	100.949210277028	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7508	False	NA	23	True	AATAAA	-20	NA	65083107	65108933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32685_38	chr12	+	3586	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	3	3	intron_retention	FALSE	canonical	3	88	junction_8	113.573842725688	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7511	False	NA	23	True	AATAAA	-20	NA	65083110	65108933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32689_13	chr12	+	3486	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	3	3	intron_retention	FALSE	canonical	3	251	junction_3	70.8601909866652	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7511	False	NA	23	True	AATAAA	-20	NA	65083110	65108933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_3269_11	chr10	-	5302	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	4	intron_retention	FALSE	canonical	3	335	junction_11	31.9479976870698	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9433	False	NA	-1	True	AATAAA	-18	NA	80397382	80377493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
Isoform_32690_5	chr12	+	4708	13	NIC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	8	0	intron_retention	FALSE	canonical	3	251	junction_3	70.8601909866652	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7516	False	NA	8	True	AATAAA	-16	NA	65083115	65110160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_32696_3	chr12	+	1866	9	ISM	ENSMUSG00000055884.9	ENSMUST00000223401.2	4050	11	0	5319	0	2052	5prime_fragment	FALSE	canonical	3	55	junction_4	42.725138969932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAACAACAAAAAAATAACT	9284	False	NA	NA	False	NA	NA	NA	65122380	65142910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494
Isoform_32699_3	chr12	+	4981	20	NNC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	-7	-43	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	38.9755232516817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAAATTGTCTAGAAT	9273	False	NA	NA	False	AGTAAA	-41	NA	65122369	65168507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141642_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303
Isoform_32700_53	chr12	+	6367	23	FSM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	-3	1411	0	81	multi-exon	FALSE	canonical	3	55	junction_4	33.1504521739726	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTTTGGTCAGAGTGAT	9280	False	NA	3	True	AATAAA	-14	NA	65122376	65177421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
Isoform_32701_23	chr12	+	7447	23	FSM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	-3	331	0	-331	multi-exon	FALSE	canonical	3	55	junction_4	33.1504521739726	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAATATTTAACATGAAC	9280	False	NA	5	True	AATAAA	-18	NA	65122376	65178501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
Isoform_32702_19	chr12	+	7558	23	FSM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	-3	220	0	-220	multi-exon	FALSE	canonical	3	55	junction_4	33.1504521739726	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTCCCAGCAGACATAC	9280	False	NA	18	True	AATAAA	-30	NA	65122376	65178612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
Isoform_32703_4	chr12	+	6160	22	NIC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	0	81	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	40.035585078307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTTTGGTCAGAGTGAT	9280	False	NA	3	True	AATAAA	-14	NA	65122376	65177421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
Isoform_32707_23	chr12	+	1997	2	FSM	ENSMUSG00000035560.6	ENSMUST00000046331.5	2228	2	232	-1	28	1	multi-exon	FALSE	canonical	3	6	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGACCTCTTTGTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	65272522	65275229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_65274272_65274981
Isoform_32709_53	chr12	+	1491	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	11	-2	4	2	multi-exon	FALSE	canonical	3	105	junction_3	15.6276108929747	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTCTCAGCAGTTAAG	NA	False	NA	11	True	ATTAAA	-25	NA	69215598	69225785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
Isoform_32711_12	chr12	+	770	3	FSM	ENSMUSG00000034883.10	ENSMUST00000222520.2	767	3	0	-3	0	-1	multi-exon	FALSE	canonical	3	25	junction_2	59	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAATGTCTCAGCAGTT	NA	False	NA	8	True	ATTAAA	-22	NA	69215594	69225782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69215837_69218635_69218735_69225353
Isoform_32712_17	chr12	+	2597	13	FSM	ENSMUSG00000051890.14	ENSMUST00000063445.13	2620	13	21	2	21	-2	multi-exon	FALSE	canonical	1	2	junction_6	3.37474278855276	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTCAGTGTGAATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	69288626	69331404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69288788_69297526_69297598_69298144_69298263_69298701_69298821_69300465_69300545_69302948_69303033_69304796_69304881_69305342_69305402_69306274_69306388_69309922_69309996_69315015_69315101_69316599_69316653_69329906
Isoform_32713_56	chr12	+	2996	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	7	-1098	7	1098	multi-exon	FALSE	canonical	3	493	junction_10	56.6727937863977	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGATGTGTATCATTA	NA	False	NA	NA	False	AATAAA	-16	NA	69343502	69358559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
Isoform_32714_513	chr12	+	1690	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	-9	224	-9	-224	multi-exon	FALSE	canonical	3	493	junction_10	56.6727937863977	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTACCTGTCTATTGTTAA	NA	False	NA	13	True	AATAAA	-13	NA	69343486	69357237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
Isoform_32715_7	chr12	+	1783	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	-99	221	-58	-221	multi-exon	TRUE	canonical	3	493	junction_10	56.6727937863977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTCTATTGTTAAAGT	NA	False	NA	16	True	AATAAA	-16	NA	69343396	69357240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
Isoform_32716_42	chr12	+	1717	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	-34	222	7	-222	multi-exon	FALSE	canonical	3	493	junction_10	56.6727937863977	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGTCTATTGTTAAAG	NA	False	NA	15	True	AATAAA	-15	NA	69343461	69357239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
Isoform_3272_11	chr10	-	4524	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	101.704177868554	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9433	False	NA	-1	True	AATAAA	-18	NA	80397382	80377493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380729_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
Isoform_32721_176	chr12	+	3714	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	17	-2197	17	2197	multi-exon	FALSE	canonical	3	1327	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGTTATGTTACTT	NA	False	NA	14	True	AATAAA	-17	NA	69418940	69422754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69418998_69419097
Isoform_32722_1982	chr12	+	1520	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	17	-3	17	3	multi-exon	FALSE	canonical	3	1327	junction_1	0	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCGTTTGTCTTTTAT	NA	False	NA	33	True	AGTAAA	-22	NA	69418940	69420560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69418998_69419097
Isoform_32723_148	chr12	+	1626	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-93	1	-93	-1	multi-exon	FALSE	canonical	3	1327	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAACTGCCGTTTGTCTT	NA	False	NA	29	True	AGTAAA	-18	NA	69418830	69420556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69418998_69419097
Isoform_32731_19	chr12	+	1599	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	-2	2	-2	0	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTAGTCTTTAC	NA	False	NA	2	True	AATAAA	-14	NA	69771721	69791432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
Isoform_32733_36	chr12	+	1477	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	13	-5	7	3	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTAGTCTTTACTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	69771748	69791437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
Isoform_32734_6	chr12	+	1361	4	NIC	ENSMUSG00000054894.7	novel	1485	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	90.3487071788462	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTAGTCTTTAC	NA	False	NA	2	True	AATAAA	-14	NA	69771748	69791432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_69771789_69787672_69787882_69788418_69788591_69790492
Isoform_32736_53	chr12	+	2018	5	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	7	4	intron_retention	FALSE	canonical	3	110	junction_1	42.1270400099509	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTAGTCTTTACTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	69771748	69791438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
Isoform_32739_3	chr12	+	2956	15	FSM	ENSMUSG00000021066.10	ENSMUST00000021466.10	5150	15	-192	2386	-192	5	multi-exon	FALSE	canonical	1	5	junction_5	4.65766868197174	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTCACTGGCTCTAGA	8782	False	NA	12	True	ATTAAA	-26	NA	69939686	70010805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006247_70007321_70007337_70010001
Isoform_32741_439	chr12	+	2336	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	43	416	43	-416	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTTGAAGAGAAGTTT	NA	False	NA	12	True	AATAAA	-18	NA	70499911	70514398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
Isoform_32743_172	chr12	+	2370	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	9	416	9	-416	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTTGAAGAGAAGTTT	NA	False	NA	12	True	AATAAA	-18	NA	70499877	70514398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
Isoform_32745_79	chr12	+	2750	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	43	2	43	-2	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTGGTGTTCTCATA	NA	False	NA	11	True	ATTAAA	-14	NA	70499911	70514812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
Isoform_32747_30	chr12	+	2785	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	9	1	9	-1	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTGGTGTTCTCATAA	NA	False	NA	12	True	ATTAAA	-15	NA	70499877	70514813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
Isoform_3275_48	chr10	-	4527	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	98.8862467480608	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9433	False	NA	-1	True	AATAAA	-18	NA	80397382	80377493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
Isoform_32751_4	chr12	+	3171	10	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-47	-3646	combination_of_known_junctions	FALSE	canonical	3	108	junction_9	12.7347100283506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATATGTTTGTTTGT	740	False	NA	NA	False	AATAAA	-23	NA	70872240	70938777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705
Isoform_32753_189	chr12	+	4675	14	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6862522431374	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTCTTGTTATTATA	749	False	NA	NA	False	AATAAA	-20	NA	70872249	70949007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
Isoform_32756_4	chr12	+	4314	13	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	46.5453780973173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTCTTGTTATTATA	774	False	NA	NA	False	AATAAA	-20	NA	70872274	70949007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70941650_70941783_70944115_70944208_70946157
Isoform_32758_19	chr12	+	4699	14	FSM	ENSMUSG00000048285.10	ENSMUST00000057859.9	4662	14	-40	3	-40	-3	multi-exon	FALSE	canonical	0	0	junction_12	41.9310507589719	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTCTCTTGTTATTA	747	False	NA	NA	False	AATAAA	-18	NA	70872247	70949005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
Isoform_32760_8	chr12	+	5018	14	NIC	ENSMUSG00000048285.10	novel	2721	12	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	44.4026759681902	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTCTCTTGTTATTA	964	False	NA	NA	False	AATAAA	-18	NA	70872464	70949005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_70872908_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
Isoform_32764_10	chr12	+	1907	5	FSM	ENSMUSG00000021076.7	ENSMUST00000222291.2	615	5	-37	-1255	-9	1255	multi-exon	FALSE	canonical	3	306	junction_4	20.5836707124847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAAAAAAATATTTCTTT	9694	False	NA	NA	False	NA	NA	NA	70984679	70995741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225
Isoform_32767_46	chr12	+	1534	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	49	2439	-9	218	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAATTTTATTAGTTTA	9694	False	NA	3	True	AATAAA	-12	NA	70984679	71009053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
Isoform_32768_214	chr12	+	1320	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	49	2653	-9	4	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGCTTATTTCAAATAT	9694	False	NA	NA	False	AATAAA	-17	NA	70984679	71008839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
Isoform_32769_52	chr12	+	1457	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	50	2515	-8	142	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGTCGTAT	9695	False	NA	4	True	NA	NA	NA	70984680	71008977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
Isoform_3277_29	chr10	-	4586	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	4	intron_retention	FALSE	canonical	3	315	junction_12	36.5310923742936	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9433	False	NA	-1	True	AATAAA	-18	NA	80397382	80377493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
Isoform_32779_2500	chr12	+	929	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	72	1845	4	1	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	2500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTTGGGTAATTGAA	4792	False	NA	2	True	ATTAAA	-13	NA	71021466	71041276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_32780_74	chr12	+	2301	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	73	472	5	-472	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGAGTTCCTTTCCTT	4793	False	NA	13	True	AATAAA	-23	NA	71021467	71042649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_32783_30	chr12	+	986	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	15	1845	15	1	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTTGGGTAATTGAA	4735	False	NA	2	True	ATTAAA	-13	NA	71021409	71041276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_32788_47	chr12	+	983	10	FSM	ENSMUSG00000060073.10	ENSMUST00000160683.8	1027	10	45	-1	1	1	multi-exon	FALSE	canonical	3	3391	junction_7	435.06460425613	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTTGGGTAATTGAA	4815	False	NA	2	True	ATTAAA	-13	NA	71021489	71041276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_32790_121	chr12	+	923	11	FSM	ENSMUSG00000060073.10	ENSMUST00000071704.4	875	11	-21	-27	5	1	multi-exon	FALSE	canonical	3	320	junction_2	1129.97747322679	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTTGGGTAATTGAA	4793	False	NA	2	True	ATTAAA	-13	NA	71021467	71041276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71021542_71025506_71025590_71030097_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_32799_7	chr6	-	759	1	FSM	ENSMUSG00000086922.3	ENSMUST00000118459.2	685	1	33	-107	33	107	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACATTGAAAAAAAAAAAAA	7151	False	NA	NA	False	ATTAAA	-13	NA	31119565	31118806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_-_31118800_31119600
Isoform_32810_107	chr12	+	4993	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	5	0	5	0	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGTTAATTCACTCTT	3386	False	NA	6	True	AATAAA	-17	NA	71062768	71145366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
Isoform_32811_24	chr12	+	5003	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	-17	12	-17	-12	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACAATTCTAGGT	3364	False	NA	-6	True	AATAAA	-5	NA	71062746	71145354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
Isoform_32812_6	chr12	+	5648	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	26	-676	-13	676	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGAACTTTCCTGTCTT	3407	False	NA	NA	False	ATTAAA	-19	NA	71062789	71146042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
Isoform_32813_6	chr12	+	5472	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	4	-478	4	478	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTTTCTGTGTTTAT	3385	False	NA	NA	False	ATTAAA	-15	NA	71062767	71145844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
Isoform_32815_3	chr12	+	5500	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	-25	-477	-25	477	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCTTTTCTGTGTTTA	3356	False	NA	NA	False	ATTAAA	-14	NA	71062738	71145843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
Isoform_32816_13	chr12	+	4653	19	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	20955	12	-11396	-12	3prime_fragment	FALSE	canonical	3	82	junction_2	14.9150888882101	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACAATTCTAGGT	8740	False	NA	-6	True	AATAAA	-5	NA	71083718	71145354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
Isoform_32824_97	chr12	+	5427	30	FSM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	330	6	330	-6	multi-exon	FALSE	canonical	3	69	junction_27	23.3199327353747	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71183951	71290071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
Isoform_32825_111	chr12	+	5164	28	FSM	ENSMUSG00000034601.18	ENSMUST00000045907.16	4507	28	-662	5	330	-5	multi-exon	FALSE	canonical	3	73	junction_27	19.0025628189986	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAAGTCTGGCTGTTTCTT	NA	False	NA	17	True	AATAAA	-15	NA	71183951	71290072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
Isoform_32826_22	chr12	+	3773	4	FSM	ENSMUSG00000044548.12	ENSMUST00000150639.2	2448	4	-128	-1197	-28	-16	multi-exon	FALSE	canonical	2	11	junction_3	8.28653526310404	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTTGTGCTGGCTGTT	1185	False	NA	NA	False	TATAAA	-20	NA	71356629	71366865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363833
Isoform_32827_22	chr12	+	3838	4	FSM	ENSMUSG00000044548.12	ENSMUST00000150639.2	2448	4	-191	-1199	-91	-14	multi-exon	FALSE	canonical	2	11	junction_3	8.28653526310404	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTGTGCTGGCTGTTGG	1122	False	NA	NA	False	TATAAA	-22	NA	71356566	71366867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363833
Isoform_32828_46	chr12	+	3724	4	FSM	ENSMUSG00000044548.12	ENSMUST00000061273.12	3650	4	-90	16	-90	-16	multi-exon	FALSE	canonical	3	14	junction_3	6.97614984548545	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTTGTGCTGGCTGTT	1123	False	NA	NA	False	TATAAA	-20	NA	71356567	71366865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363944
Isoform_32831_9	chr12	+	3766	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-6	-2040	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTTGTGAAGTATT	1797	False	NA	NA	False	TTTAAA	-8	NA	71877845	72037059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
Isoform_32832_8	chr12	+	4576	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-11	-1235	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCAGCTCCTAGTATCC	1792	False	NA	NA	False	AATAAA	-20	NA	71877840	72037864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
Isoform_32833_130	chr12	+	5786	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCTGTTTTCTATGCAT	1823	False	NA	20	True	AATAAA	-20	NA	71877871	72039105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
Isoform_32836_3	chr12	+	5932	26	NNC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.0302132580371	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCTGTTTTCTATGCA	1823	False	NA	19	True	AATAAA	-19	NA	71877871	72039104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_71877971_71906690_71906838_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
Isoform_32840_57	chr12	+	5903	25	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	21.2589441961103	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTTTTCTATGCATT	1842	False	NA	21	True	AATAAA	-21	NA	71877890	72039106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
Isoform_32846_96	chr12	+	1181	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	91	20	91	-16	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132721	72147615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32848_76	chr12	+	1233	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132630	72147615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_72132686_72132724_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32849_59	chr12	+	1827	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	39	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTCCATGTTCTGAT	NA	False	NA	8	True	AATAAA	-14	NA	72132669	72148229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_72132697_72132716_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32850_50	chr12	+	1838	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTCCATGTTCTGAT	NA	False	NA	8	True	AATAAA	-14	NA	72132631	72148229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_72132678_72132724_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32852_9	chr12	+	1258	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	-22	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132608	72147615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_72132650_72132685_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32853_62	chr12	+	1633	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	252	-593	252	-7	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACTCCATGTTCTGA	NA	False	NA	7	True	AATAAA	-13	NA	72132882	72148228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32856_8	chr12	+	1973	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	-9	111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCATATTCAATTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	72132621	72148346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_72132686_72132724_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_3286_460	chr10	-	2706	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	-36	4	-36	-4	multi-exon	FALSE	canonical	3	135	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTGCCCTTCTGTCTG	8670	False	NA	-10	True	ATTAAA	-14	NA	80413191	80402961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80405057_80412580
Isoform_32861_26	chr12	+	1003	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	251	620	251	-16	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132881	72147615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32862_18	chr12	+	1623	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	251	0	251	0	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132881	72148235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32863_16	chr12	+	1829	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.673422708512	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTCCATGTTCTGAT	NA	False	NA	8	True	AATAAA	-14	NA	72132631	72148229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_72132650_72132687_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32865_22	chr12	+	1199	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	30	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.673422708512	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132660	72147615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_72132697_72132721_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_32872_35	chr12	+	1025	2	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	0	37877	0	-37877	5prime_fragment	FALSE	canonical	3	96	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGGTTATTTTGATGGTT	NA	False	NA	NA	False	ATTAAA	-25	NA	72583156	72589016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_72583314_72588148
Isoform_32873_28	chr12	+	4296	11	FSM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	1	3	1	-3	multi-exon	FALSE	canonical	2	9	junction_2	24.633513756669	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	72583157	72626890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
Isoform_32875_8	chr12	+	3409	8	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	0	-11431	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	29.3097462372126	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATTATATCTC	NA	False	NA	NA	False	AATAAA	-5	NA	72583156	72615462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72614233
Isoform_3288_76	chr10	-	2793	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	-115	-4	-115	4	multi-exon	FALSE	canonical	3	135	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGTCTGTCTGATTG	8591	False	NA	-2	True	ATTAAA	-22	NA	80413270	80402953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80405057_80412580
Isoform_32880_142	chr12	+	3980	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-6	-74	-6	74	multi-exon	FALSE	canonical	3	365	junction_1	26.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGAGATCCTTGCTTT	NA	False	NA	11	True	AATAAA	-16	NA	72808082	72836248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_72808406_72830456_72831311_72833445
Isoform_32886_14	chr12	+	3302	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	82	4284	-22	971	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGAGTTGGGAGTATGG	NA	False	NA	NA	False	AATAAA	-20	NA	72808066	72842309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
Isoform_32888_77	chr12	+	2603	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	63	5002	-41	253	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGATAGATGTGTGT	NA	False	NA	12	True	ATTAAA	-27	NA	72808047	72841591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
Isoform_32889_129	chr12	+	2691	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	98	4879	-6	376	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTGTTGGCCTTTAAA	NA	False	NA	8	True	AATAAA	-16	NA	72808082	72841714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
Isoform_32907_219	chr12	+	1367	8	FSM	ENSMUSG00000021103.13	ENSMUST00000021523.7	2505	8	1	1137	1	0	multi-exon	FALSE	non_canonical	0	0	junction_6	110.46488037344	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGTGGGATTTTTT	NA	False	NA	6	True	AATAAA	-16	NA	73170491	73319625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
Isoform_3291_7	chr10	-	3094	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	-426	6	-426	-6	multi-exon	FALSE	canonical	3	135	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAACCTGCCCTTCTGTC	8280	False	NA	-12	True	ATTAAA	-12	NA	80413581	80402963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80405057_80412580
Isoform_32911_3	chr12	+	1870	16	FSM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	56	1106	-22	1078	multi-exon	FALSE	canonical	2	3	junction_10	3.76769897358528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTGCCAA	NA	False	NA	NA	False	NA	NA	NA	73333608	73399717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
Isoform_32913_7	chr12	+	3707	14	FSM	ENSMUSG00000021108.19	ENSMUST00000021527.15	3545	14	-173	11	-172	-2	multi-exon	FALSE	canonical	1	3	junction_1	3.36532966988113	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAGGAAATTTTGTGAG	NA	False	NA	NA	False	AATAAA	-13	NA	73631397	73824948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_73632300_73696065_73696130_73738321_73738473_73739705_73739741_73742960_73743050_73744690_73744821_73746954_73747083_73749211_73749356_73749512_73749687_73768509_73768665_73805659_73805799_73806326_73806516_73822163_73822308_73823685
Isoform_32917_331	chr12	+	3979	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	106	639	106	-639	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8464	False	NA	19	True	AATAAA	-19	NA	73954783	73993665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_32919_91	chr12	+	4618	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	106	0	106	0	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	8464	False	NA	11	True	AATAAA	-22	NA	73954783	73994304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_32922_22	chr12	+	4104	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	-19	639	-19	-639	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8339	False	NA	19	True	AATAAA	-19	NA	73954658	73993665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_32928_125	chr12	+	3936	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	106	-640	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTGGGTCAGCGCTTA	8464	False	NA	18	True	AATAAA	-18	NA	73954783	73993664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_3293_26	chr10	-	4584	4	ISM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	28	0	2	0	intron_retention	FALSE	canonical	3	372	junction_3	33.2565782966318	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7826	False	NA	-5	True	ATTAAA	-15	NA	80426147	80419487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348
Isoform_32931_45	chr12	+	3985	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	56	-641	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCCTGGGTCAGCGCTT	8414	False	NA	17	True	AATAAA	-17	NA	73954733	73993663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_32933_40	chr12	+	4583	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	99	0	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	8457	False	NA	11	True	AATAAA	-22	NA	73954776	73994304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_32938_109	chr12	+	3982	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	106	-639	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	100.579545127025	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8464	False	NA	19	True	AATAAA	-19	NA	73954783	73993665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_32939_40	chr12	+	4628	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	100.579545127025	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	8457	False	NA	11	True	AATAAA	-22	NA	73954776	73994304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_3294_12	chr10	-	2112	5	FSM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	28	-672	2	672	multi-exon	TRUE	canonical	3	337	junction_4	42.7631558704453	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGCATATATGTCTG	7826	False	NA	NA	False	NA	NA	NA	80426147	80418815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422865_80426008
Isoform_32943_69	chr12	+	3947	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	99	-639	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	110.208707385912	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8457	False	NA	19	True	AATAAA	-19	NA	73954776	73993665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_3295_863	chr10	-	1440	5	FSM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	28	0	2	0	multi-exon	FALSE	canonical	3	337	junction_4	42.7631558704453	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7826	False	NA	-5	True	ATTAAA	-15	NA	80426147	80419487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422865_80426008
Isoform_32957_3	chr12	+	2993	9	ISM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-17	4582	-17	277	intron_retention	FALSE	canonical	3	65	junction_3	12.4373429638327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATCTTCTAGTGTGT	NA	False	NA	2	True	AATAAA	-14	NA	74011282	74031158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251
Isoform_32958_4	chr12	+	2879	10	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	7	279	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	28.0981524808929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTTCTAGTGTGTGA	NA	False	NA	4	True	AATAAA	-16	NA	74011261	74031160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74029490
Isoform_32959_100	chr12	+	1707	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-8	4576	-8	283	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTAGTGTGTGAAATT	NA	False	NA	8	True	AATAAA	-20	NA	74011291	74031164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
Isoform_3296_24	chr10	-	1245	4	NIC	ENSMUSG00000003346.15	novel	1468	5	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	157.557044343381	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7826	False	NA	-5	True	ATTAAA	-15	NA	80426147	80419487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80419898_80419976_80420157_80422348_80422865_80426008
Isoform_32960_9	chr12	+	6300	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-28	3	17	-3	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTTTTTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	74011271	74035737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
Isoform_32961_6	chr12	+	2859	9	NNC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	14	284	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	27.4018133524043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTAGTGTGTGAAATTT	NA	False	NA	9	True	AATAAA	-21	NA	74011268	74031165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029406
Isoform_32962_6	chr12	+	1626	9	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	12	282	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	28.297250308113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTAGTGTGTGAAAT	NA	False	NA	7	True	AATAAA	-19	NA	74011266	74031163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
Isoform_32963_4	chr12	+	2128	13	FSM	ENSMUSG00000063450.15	ENSMUST00000157033.2	2121	13	-28	21	-1	-21	multi-exon	FALSE	canonical	0	0	junction_4	0.897527467855751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAAATCAATCT	NA	False	NA	NA	False	NA	NA	NA	75865095	75952656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_75865253_75900794_75900922_75925107_75925170_75926886_75926983_75927092_75927171_75927258_75927352_75934927_75935116_75936999_75937197_75939856_75939958_75943376_75943479_75945925_75946064_75950984_75951150_75952032
Isoform_32964_10	chr12	+	3070	23	ISM	ENSMUSG00000063450.15	ENSMUST00000143031.8	21704	115	0	187913	0	9126	5prime_fragment	TRUE	canonical	0	0	junction_4	1.26621711610765	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAATAAATAAAGAAA	NA	False	NA	NA	False	AAGAAA	-29	NA	75865091	75969787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_75865253_75900794_75900922_75925107_75925170_75926886_75926983_75927092_75927171_75927258_75927352_75934927_75935116_75936999_75937197_75939856_75939958_75943376_75943479_75945925_75946064_75950984_75951150_75952032_75952146_75953484_75953648_75955641_75955721_75955949_75956138_75957789_75957955_75959076_75959200_75961962_75962137_75965287_75965447_75965739_75965914_75967888_75968024_75969698
Isoform_32965_4	chr12	+	2509	16	NIC	ENSMUSG00000063450.15	novel	21704	115	NA	NA	-17105	7846	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	2.8095076674274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCGTGGCTCTTGGTTTA	2277	False	NA	NA	False	NA	NA	NA	76051968	76082435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070792_76070932_76072330_76072463_76074481_76074635_76074729_76074940_76076572_76076675_76078049_76078170_76078270_76078469_76080368_76080543_76082303
Isoform_32966_4	chr12	+	4075	20	ISM	ENSMUSG00000063450.15	ENSMUST00000085280.12	7335	41	40454	20	52	0	3prime_fragment	FALSE	canonical	1	1	junction_10	7.07850712777029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7482	False	NA	NA	False	AAGAAA	-43	NA	76118841	76157674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76146801_76146871_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
Isoform_32967_4	chr12	+	4067	19	ISM	ENSMUSG00000063450.15	ENSMUST00000139204.8	5789	31	23455	-26	17	0	3prime_fragment	FALSE	canonical	2	10	junction_3	5.31391139566588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTTGTGTATTGGAC	7447	False	NA	NA	False	NA	NA	NA	76118806	76157700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
Isoform_32972_3510	chr12	+	3126	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	116	-1	1	1	multi-exon	FALSE	canonical	3	837	junction_20	135.484134190258	3510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGTGTTGAAACATAAAC	8027	False	NA	10	True	AATAAA	-18	NA	76302187	76366578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
Isoform_32973_253	chr12	+	3326	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	-85	0	-85	0	multi-exon	TRUE	canonical	3	837	junction_20	135.484134190258	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	7826	False	NA	9	True	AATAAA	-17	NA	76301986	76366577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
Isoform_32974_759	chr12	+	3239	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	2	0	2	0	multi-exon	FALSE	canonical	3	837	junction_20	135.484134190258	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	7913	False	NA	9	True	AATAAA	-17	NA	76302073	76366577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
Isoform_33006_32	chr12	+	3524	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	169	8497	169	-8497	multi-exon	FALSE	canonical	3	110	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGGTTGTTCTATAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	76417208	76435227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76417505_76431999
Isoform_33008_12	chr12	+	3764	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	-69	8495	-69	-8495	multi-exon	FALSE	canonical	3	110	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTGTTCTATAAAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	76416970	76435229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76417505_76431999
Isoform_3301_1789	chr10	-	2442	9	FSM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	0	7	0	-1	multi-exon	TRUE	canonical	3	325	junction_4	58.371118714652	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCGAGTGCTATGTTGT	NA	False	NA	-6	True	AATAAA	-19	NA	80492328	80478457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
Isoform_33010_45	chr12	+	3658	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	326	8206	326	-8206	multi-exon	FALSE	canonical	3	110	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTTTTTAATGTGAAT	NA	False	NA	NA	False	AATAAA	-16	NA	76417365	76435518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76417505_76431999
Isoform_33012_5	chr12	+	4041	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	-61	8210	-61	-8210	multi-exon	FALSE	canonical	3	110	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAATGCTTTTTAATGT	NA	False	NA	NA	False	AATAAA	-12	NA	76416978	76435514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76417505_76431999
Isoform_33015_13	chr12	+	3814	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	172	8204	172	-8204	multi-exon	FALSE	canonical	3	110	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTTTAATGTGAATTA	NA	False	NA	NA	False	AATAAA	-18	NA	76417211	76435520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76417505_76431999
Isoform_33017_7	chr12	+	3950	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	31	8209	31	-8209	multi-exon	FALSE	canonical	3	110	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAATGCTTTTTAATGTG	NA	False	NA	NA	False	AATAAA	-13	NA	76417070	76435515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76417505_76431999
Isoform_33019_3	chr12	+	2442	2	FSM	ENSMUSG00000059970.8	ENSMUST00000080449.7	2524	2	78	4	78	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGCTGTCTGGCGTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	76451027	76453708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76451064_76451302
Isoform_33020_31	chr12	+	2655	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	58	-1858	-5	3	multi-exon	FALSE	canonical	3	44	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTCAGTCGTGGTGTC	NA	False	NA	13	True	NA	NA	NA	76491328	76497292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76491440_76494748
Isoform_33021_9	chr12	+	2265	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	0	-1410	0	-445	multi-exon	FALSE	canonical	3	44	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAACTCTCCATCATTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	76491270	76496844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76491440_76494748
Isoform_33024_38	chr12	+	4961	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	13.5993079408692	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGGCCTCCTTC	7220	False	NA	21	True	NA	NA	NA	76580329	76625815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
Isoform_33025_5	chr12	+	5138	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	13.5993079408692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGTGTGGCCTCCTT	7042	False	NA	20	True	NA	NA	NA	76580151	76625814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
Isoform_33027_5	chr12	+	6411	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	13.5993079408692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTATTGATTTATTAGAA	7220	False	NA	15	True	AATAAA	-17	NA	76580329	76627265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
Isoform_33029_63	chr12	+	4956	18	FSM	ENSMUSG00000052609.10	ENSMUST00000219063.2	4535	18	-64	-357	-4	0	multi-exon	FALSE	canonical	3	37	junction_13	11.6696157090046	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCTGTGTGTGGCCTCCT	7220	False	NA	19	True	NA	NA	NA	76580329	76625813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618823_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
Isoform_33030_8	chr12	+	5181	18	FSM	ENSMUSG00000052609.10	ENSMUST00000219063.2	4535	18	-288	-358	-48	1	multi-exon	FALSE	canonical	3	37	junction_13	11.6696157090046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGTGTGGCCTCCTT	6996	False	NA	20	True	NA	NA	NA	76580105	76625814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618823_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
Isoform_33033_5	chr12	+	6405	18	FSM	ENSMUSG00000052609.10	ENSMUST00000219063.2	4535	18	-64	-1806	-4	0	multi-exon	FALSE	canonical	3	37	junction_13	11.6696157090046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTATTATTGATTTATTA	7220	False	NA	12	True	AATAAA	-14	NA	76580329	76627262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618823_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
Isoform_33042_143	chr12	+	627	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	0	49	0	12	multi-exon	FALSE	canonical	3	492	junction_2	1.88561808316413	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAAATAGC	NA	False	NA	-40	True	NA	NA	NA	76812311	76829905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
Isoform_33045_816	chr12	+	2598	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	15	0	-4	0	multi-exon	FALSE	canonical	3	246	junction_4	27.7548298231568	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76884202	76968186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
Isoform_33055_89	chr12	+	2924	12	FSM	ENSMUSG00000021065.17	ENSMUST00000171770.10	2765	12	-60	-99	-37	-4	multi-exon	FALSE	canonical	3	35	junction_1	20.7412233753807	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77284861	77522755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_33056_5	chr12	+	2894	12	FSM	ENSMUSG00000021065.17	ENSMUST00000171770.10	2765	12	-123	-6	-100	6	multi-exon	FALSE	canonical	3	35	junction_1	20.7412233753807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAGGAAGTTTTGTAAAA	NA	False	NA	-88	True	AATAAA	-42	NA	77284798	77522662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_33057_15	chr12	+	2863	11	NIC	ENSMUSG00000021065.17	novel	2765	12	NA	NA	-69	-4	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	30.4065782356384	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77284829	77522755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_77284974_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_33058_21	chr12	+	3318	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-317	357	-65	-4	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285521	77522755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_33059_46	chr12	+	3281	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-280	357	-28	-4	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285558	77522755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_3306_524	chr10	-	2459	9	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_4	127.904994038544	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	-5	True	AATAAA	-20	NA	80492326	80478456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
Isoform_33060_67	chr12	+	3222	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-221	357	31	-4	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285617	77522755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_33066_21	chr12	+	3129	11	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	31	-4	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	26.8158535198863	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285617	77522755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_33067_14	chr12	+	3193	11	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-33	-4	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	26.8158535198863	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285553	77522755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_3307_29	chr10	-	2482	9	NIC	ENSMUSG00000003344.15	novel	3026	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_4	127.904994038544	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	-5	True	AATAAA	-20	NA	80492349	80478456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
Isoform_33071_5	chr12	+	1699	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	176	69680	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTAAAATATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	77600296	77686163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_77600570_77616271_77616542_77684209_77684294_77685091
Isoform_33072_3	chr12	+	1927	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	-25	69707	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAATTGGTTTCCTTTGA	NA	False	NA	NA	False	NA	NA	NA	77600095	77686190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_77600570_77616271_77616542_77684209_77684294_77685091
Isoform_33073_4	chr12	+	1586	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	189	69707	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAATTGGTTTCCTTTGA	NA	False	NA	NA	False	NA	NA	NA	77600309	77686190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_77600570_77616271_77616542_77684209_77684294_77685218
Isoform_33075_60	chr12	+	3195	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	105	0	105	0	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGTGCGGCCT	NA	False	NA	21	True	AATAAA	-24	NA	78273531	78731541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
Isoform_33078_20	chr12	+	3368	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	-68	0	-68	0	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGTGCGGCCT	NA	False	NA	21	True	AATAAA	-24	NA	78273358	78731541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
Isoform_33079_5	chr12	+	3690	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	-393	3	-119	-3	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGTATTGTGCGG	NA	False	NA	18	True	AATAAA	-21	NA	78273033	78731538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
Isoform_33080_4	chr12	+	3139	22	NIC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	17.5868431548756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGTGCGGCCT	NA	False	NA	21	True	AATAAA	-24	NA	78273479	78731541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
Isoform_33085_107	chr12	+	5276	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCACTGGACACTTTCT	NA	False	NA	17	True	AATAAA	-26	NA	78795671	78887361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
Isoform_33091_30	chr12	+	5055	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	32.7592485772635	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCACTGGACACTTTC	NA	False	NA	16	True	AATAAA	-25	NA	78795654	78887360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_78795720_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
Isoform_33093_28	chr12	+	5381	15	FSM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	-38	127	28	1	multi-exon	FALSE	canonical	3	22	junction_1	32.6002378856977	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCACTGGACACTTTCT	NA	False	NA	17	True	AATAAA	-26	NA	78795727	78887361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_78795881_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
Isoform_33095_4	chr12	+	5092	15	NIC	ENSMUSG00000021112.10	novel	5470	15	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	41.9492526264577	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCACTGGACACTTTC	NA	False	NA	16	True	AATAAA	-25	NA	78795778	78887360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_78795881_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
Isoform_33101_4495	chr12	+	1489	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	226	1690	-40	-1690	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	4495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTAGGCTTCTTCCTTCT	NA	False	NA	23	True	AATAAA	-16	NA	78908818	78932094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
Isoform_33102_290	chr12	+	1703	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	225	1477	-41	-1477	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAAGCAGTGATAACTT	NA	False	NA	30	True	ATTAAA	-23	NA	78908817	78932307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
Isoform_33122_3	chr12	+	1964	7	ISM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	10	25830	10	5519	5prime_fragment	FALSE	canonical	3	125	junction_6	11.6249253283145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTTTATTTATTTACTT	6135	False	NA	NA	False	NA	NA	NA	79075946	79102599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433
Isoform_33124_164	chr12	+	6395	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	40	4	40	3	multi-exon	FALSE	canonical	3	125	junction_6	14.4205688557161	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTGTGTTGTGGATA	6165	False	NA	8	True	AATAAA	-20	NA	79075976	79128425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
Isoform_33126_7	chr12	+	4604	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	-3	1838	-3	-812	multi-exon	TRUE	canonical	3	125	junction_6	14.4205688557161	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTCTGGATGCTACC	6122	False	NA	NA	False	NA	NA	NA	79075933	79126591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
Isoform_33139_12	chr12	+	1716	7	FSM	ENSMUSG00000021123.13	ENSMUST00000021548.12	1678	7	-40	2	-40	-1	multi-exon	FALSE	canonical	2	3	junction_5	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTGGTGTCTTTTCTC	335	False	NA	NA	False	AATAAA	-17	NA	79255647	79269437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_79255883_79257614_79257734_79258161_79258318_79259426_79259532_79260317_79260528_79265449_79265640_79268736
Isoform_33140_3	chr12	+	1521	11	FSM	ENSMUSG00000059060.16	ENSMUST00000171210.3	1858	11	20	317	20	-5	multi-exon	FALSE	canonical	1	1	junction_1	20.7848502520466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCGGGGTCTCCAAAG	8664	False	NA	2	True	AATAAA	-35	NA	79344075	79861147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_79344107_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963_79850043_79860715
Isoform_33141_4	chr12	+	1454	10	NIC	ENSMUSG00000059060.16	novel	1858	11	NA	NA	-30	-10777	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	12.8754719438853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAGAGAGAGAGA	8683	False	NA	NA	False	NA	NA	NA	79344094	79850375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_79344158_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963
Isoform_33142_15	chr12	+	1520	11	NIC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	14.8811961884789	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCGGGGTCTCCAAAG	8716	False	NA	2	True	AATAAA	-35	NA	79344127	79861147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_79344158_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963_79850043_79860715
Isoform_33145_6	chr12	+	3309	10	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83.0686165873033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCAGTGATTGTAAATG	2789	False	NA	20	True	AATAAA	-17	NA	80509994	80544894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80510055_80522496_80522963_80526039_80526167_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
Isoform_33146_4	chr12	+	1245	3	ISM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	123	16952	-2	1	5prime_fragment	FALSE	canonical	3	212	junction_2	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATTGGTGTTT	2786	False	NA	NA	False	AAGAAA	-18	NA	80509991	80527944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_80510055_80522496_80522963_80527228
Isoform_33147_360	chr12	+	3189	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	126	-5	1	5	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTGTAAATGTGAAGCT	2789	False	NA	27	True	AATAAA	-24	NA	80509994	80544901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
Isoform_33150_5	chr12	+	3415	8	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-32	-9	intron_retention	FALSE	canonical	3	173	junction_6	22.1018052637871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACAAAGCTCAGTGATT	2756	False	NA	13	True	AATAAA	-10	NA	80509961	80544887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80538005_80539315_80539673_80543554
Isoform_33153_8	chr12	+	3905	16	FSM	ENSMUSG00000021130.9	ENSMUST00000219993.2	4222	16	316	1	-209	-1	multi-exon	FALSE	canonical	2	6	junction_1	5.44630353746669	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATAGGCTGATGCCTTT	NA	False	NA	2	True	AATAAA	-17	NA	80565366	80650665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80565423_80565829_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
Isoform_33154_4	chr12	+	4049	16	FSM	ENSMUSG00000021130.9	ENSMUST00000219993.2	4222	16	175	-2	175	2	multi-exon	FALSE	canonical	2	6	junction_1	5.44630353746669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGCTGATGCCTTTATT	NA	False	NA	5	True	AATAAA	-20	NA	80565225	80650668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80565423_80565829_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
Isoform_33155_29	chr12	+	3866	15	FSM	ENSMUSG00000021130.9	ENSMUST00000021558.8	3922	15	50	6	50	0	multi-exon	FALSE	canonical	2	15	junction_3	4.40141442942968	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATAGGCTGATGCCTTTA	NA	False	NA	3	True	AATAAA	-18	NA	80565813	80650666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
Isoform_33156_7	chr12	+	3963	15	FSM	ENSMUSG00000021130.9	ENSMUST00000021558.8	3922	15	-47	6	-47	0	multi-exon	FALSE	canonical	2	15	junction_3	4.40141442942968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATAGGCTGATGCCTTTA	NA	False	NA	3	True	AATAAA	-18	NA	80565716	80650666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
Isoform_33157_3	chr12	+	5013	8	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	38.0579579492293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATGTGAGTGGCTCTTT	NA	False	NA	12	True	ATTAAA	-17	NA	80691011	80730111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80691191_80691379_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
Isoform_33159_12	chr12	+	4652	7	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.9864840178139	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTATGTGAGTGGCTCT	NA	False	NA	10	True	ATTAAA	-15	NA	80690999	80730109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80691191_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
Isoform_33160_11	chr12	+	2440	6	FSM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-289	4	-5	-4	multi-exon	FALSE	canonical	3	88	junction_2	11.4647285183732	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAATACTGACTCTTCT	NA	False	NA	NA	False	AATAAA	-8	NA	80690994	80725124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905
Isoform_33161_104	chr12	+	5212	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-13	2	0	-2	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTATGTGAGTGGCTCT	NA	False	NA	10	True	ATTAAA	-15	NA	80690999	80730109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
Isoform_33163_10	chr12	+	5517	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-319	3	37	-3	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTTATGTGAGTGGCTC	NA	False	NA	9	True	ATTAAA	-14	NA	80690693	80730108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
Isoform_33170_5	chr12	+	3505	13	FSM	ENSMUSG00000066438.7	ENSMUST00000140770.2	3535	13	24	6	24	-6	multi-exon	FALSE	canonical	0	0	junction_2	3.32812092461931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGATTACTGGTTTCC	NA	False	NA	-2	True	AATGAA	-9	NA	80739388	80770982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80739802_80752317_80752412_80752778_80752869_80753126_80753204_80753945_80754038_80754955_80755009_80763994_80764090_80765686_80765781_80767357_80767537_80767986_80768120_80768222_80768368_80768719_80768870_80769092
Isoform_33171_53	chr12	+	2272	2	FSM	ENSMUSG00000066438.7	ENSMUST00000153762.2	956	2	-18	-1298	-18	-6	multi-exon	FALSE	canonical	3	14	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGATTACTGGTTTCC	NA	False	NA	-2	True	AATGAA	-9	NA	80768487	80770982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80768870_80769092
Isoform_33173_20	chr12	+	5029	7	FSM	ENSMUSG00000021133.10	ENSMUST00000220238.2	2127	7	58	-2960	9	-2	multi-exon	FALSE	canonical	1	6	junction_2	21.4689698557399	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAGATGTAGTCCTTC	3468	False	NA	15	True	AATAAA	-17	NA	80837341	80927607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80837590_80874799_80875018_80897987_80898051_80915200_80915399_80916848_80916985_80920922_80921351_80923869
Isoform_33174_21	chr12	+	5081	6	FSM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	-107	3	-58	-3	multi-exon	FALSE	canonical	3	47	junction_3	3.86781592116274	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGAGATGTAGTCCTT	3352	False	NA	14	True	AATAAA	-16	NA	80837225	80927606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80837590_80874799_80875018_80915200_80915399_80916848_80916985_80920922_80921351_80923869
Isoform_33175_101	chr12	+	4966	6	FSM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	9	2	9	-2	multi-exon	FALSE	canonical	3	47	junction_3	3.86781592116274	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAGATGTAGTCCTTC	3468	False	NA	15	True	AATAAA	-17	NA	80837341	80927607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80837590_80874799_80875018_80915200_80915399_80916848_80916985_80920922_80921351_80923869
Isoform_33178_27	chr12	+	1484	8	NIC	ENSMUSG00000021134.18	novel	1498	8	NA	NA	5	3	intron_retention	FALSE	canonical	3	289	junction_7	734.182927769756	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992312	80997274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
Isoform_33180_202	chr12	+	1481	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110352.10	1491	8	7	3	5	3	multi-exon	FALSE	canonical	3	307	junction_1	564.545762863691	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992312	80997274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
Isoform_33184_26	chr12	+	2710	7	FSM	ENSMUSG00000021134.18	ENSMUST00000153056.8	2720	7	7	3	5	3	multi-exon	FALSE	canonical	3	307	junction_1	608.09467921442	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992312	80997274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
Isoform_33190_43	chr12	+	1493	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110351.8	1498	8	1	4	1	2	multi-exon	FALSE	canonical	3	289	junction_7	580.121838012305	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992306	80997273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
Isoform_33194_714	chr12	+	1484	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	35	8	5	2	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
Isoform_33196_118	chr12	+	1513	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	6	8	6	2	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992283	80997273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
Isoform_33199_24	chr12	+	2716	7	NIC	ENSMUSG00000021134.18	novel	1498	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	289	junction_6	621.078273828849	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996490
Isoform_33201_89	chr12	+	2713	7	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	1278	junction_1	250.508150233347	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
Isoform_33209_67	chr12	+	1614	8	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	5	3	intron_retention	FALSE	canonical	3	289	junction_7	680.802857376675	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992312	80997274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
Isoform_33210_414	chr12	+	1610	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	-46	4	5	2	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
Isoform_33216_50	chr12	+	2842	7	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	562	junction_1	513.606096363957	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAACTGCTTTTGGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	80992308	80997272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
Isoform_33233_27	chr12	+	3496	13	FSM	ENSMUSG00000021136.14	ENSMUST00000110347.9	3496	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	48.9003379901975	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073581	81233188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
Isoform_33234_195	chr12	+	3463	13	FSM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	-20	-4	0	0	multi-exon	FALSE	canonical	3	56	junction_1	31.9699294476683	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073581	81233188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
Isoform_33243_19	chr12	+	2031	2	ISM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	157047	-2	157047	2	3prime_fragment	FALSE	canonical	3	175	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGGTGCCTCTTTCTTT	NA	False	NA	15	True	AATAAA	-17	NA	81230648	81233186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_81230816_81231322
Isoform_33244_30	chr12	+	2222	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-135	-45	-15	45	multi-exon	FALSE	canonical	3	20	junction_1	7	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACACGGACAATCTCATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	81678007	81711760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_81678576_81707339_81707523_81710289
Isoform_33247_4	chr12	+	4718	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-124	-2552	-4	-64	multi-exon	FALSE	canonical	3	20	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTCAGATTTCATT	NA	False	NA	-56	True	AAGAAA	-25	NA	81678018	81714267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_81678576_81707339_81707523_81710289
Isoform_33249_5	chr12	+	7368	34	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-116	-42	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	7.07392423202313	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGCATGAAAGGCAAACT	NA	False	NA	15	True	AATAAA	-22	NA	81906680	82043137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
Isoform_3325_213	chr10	-	3437	14	FSM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	1	1	1	-1	multi-exon	FALSE	canonical	3	105	junction_13	111.384031022692	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9982	False	NA	-47	True	AATAAA	-13	NA	80512126	80501161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
Isoform_33250_3	chr12	+	7946	34	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	56	-3	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	7.07392423202313	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTCTATGTGGCTCT	NA	False	NA	6	True	AGTAAA	-13	NA	81906859	82043894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
Isoform_33252_20	chr12	+	6279	25	NIC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	32.3541331294095	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGAATGTCTTTATTTT	NA	False	NA	19	True	NA	NA	NA	82216172	82497046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
Isoform_33254_26	chr12	+	6183	24	NIC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	21.8092781282731	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGAATGTCTTTATTTT	NA	False	NA	19	True	NA	NA	NA	82216199	82497046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
Isoform_33255_22	chr12	+	6179	25	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	35.1780194945019	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGAATGTCTTTATTTT	NA	False	NA	19	True	NA	NA	NA	82216167	82497046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
Isoform_33258_6	chr12	+	6192	24	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_22	32.4689178110162	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216195	82497048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496080_82496166_82496674
Isoform_33259_3	chr12	+	6402	24	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	205	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.278851363064	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGAATGTCTTTATT	NA	False	NA	17	True	NA	NA	NA	82216454	82497044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_82216851_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
Isoform_33264_279	chr12	+	1896	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	113	-1	-55	1	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTAATTTTGCCAAAG	NA	False	NA	11	True	NA	NA	NA	83567352	83588690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_33265_54	chr12	+	2038	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	46	-76	46	71	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTATGTACTTCTTTGC	NA	False	NA	16	True	AATAAA	-29	NA	83567285	83588765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_33266_171	chr12	+	1975	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	109	-76	-59	71	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTATGTACTTCTTTGC	NA	False	NA	16	True	AATAAA	-29	NA	83567348	83588765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_33267_83	chr12	+	1929	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	80	-1	80	1	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTAATTTTGCCAAAG	NA	False	NA	11	True	NA	NA	NA	83567319	83588690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_33268_14	chr12	+	2079	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	-70	-1	-70	1	multi-exon	TRUE	canonical	3	216	junction_9	23.528907060372	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTAATTTTGCCAAAG	NA	False	NA	11	True	NA	NA	NA	83567169	83588690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_33269_14	chr12	+	2130	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	-46	-76	-46	71	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTATGTACTTCTTTGC	NA	False	NA	16	True	AATAAA	-29	NA	83567193	83588765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_3327_912	chr10	-	3395	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	433	junction_2	28.6420471318886	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9982	False	NA	-47	True	AATAAA	-13	NA	80512126	80501161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
Isoform_33270_42	chr12	+	1886	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	62.8602281575852	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTCTAATTTTGCCAA	NA	False	NA	9	True	NA	NA	NA	83567357	83588688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_33271_39	chr12	+	1985	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-73	70	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	62.8602281575852	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTATGTACTTCTTTG	NA	False	NA	15	True	AATAAA	-28	NA	83567334	83588764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_33273_11	chr12	+	1957	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	62.8602281575852	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTTCTAATTTTGCCA	NA	False	NA	8	True	NA	NA	NA	83567285	83588687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_33282_13	chr12	+	4376	21	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	164.86857644803	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	4015	False	NA	15	True	AATAAA	-15	NA	83679059	83729899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
Isoform_33290_32	chr12	+	4301	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	144.182728784617	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3972	False	NA	15	True	AATAAA	-15	NA	83679016	83729899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
Isoform_33297_9	chr12	+	4373	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-27	2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	158.146798805095	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3954	False	NA	15	True	AATAAA	-15	NA	83678998	83729899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
Isoform_3330_14	chr10	-	3496	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	162.294603919965	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9982	False	NA	-47	True	AATAAA	-13	NA	80512126	80501161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507909_80511657_80511775_80511914
Isoform_33306_58	chr12	+	4153	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	25	48	-14	-48	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	4006	False	NA	4	True	ATTAAA	-15	NA	83679050	83729849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
Isoform_33307_37	chr12	+	4255	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	-27	-2	-27	2	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3954	False	NA	15	True	AATAAA	-15	NA	83678998	83729899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
Isoform_33308_43	chr12	+	4211	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	17	-2	12	2	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3998	False	NA	15	True	AATAAA	-15	NA	83679042	83729899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
Isoform_3331_33	chr10	-	3454	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	131.855892289124	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9982	False	NA	-47	True	AATAAA	-13	NA	80512126	80501161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507909_80511657_80511775_80511956
Isoform_33319_27	chr12	+	4273	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_10	142.341791458334	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3998	False	NA	15	True	AATAAA	-15	NA	83679042	83729899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
Isoform_33320_10	chr12	+	3090	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-10	-105	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_10	142.341791458334	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGCAGAATTCTACTTA	3971	False	NA	5	True	ATTAAA	-15	NA	83679015	83728689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
Isoform_33348_762	chr12	+	2671	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	18	1	-2	-1	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTCTCTGTCCTGGCTG	3363	False	NA	8	True	ATTAAA	-19	NA	83734943	83781868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
Isoform_33350_27	chr12	+	5998	13	NNC	ENSMUSG00000019969.15	novel	2690	12	NA	NA	-5	3247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	91.2504185682942	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGCTTGTTTTCTTCCA	3360	False	NA	3	True	AATAAA	-16	NA	83734940	83785220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689_83783759_83783786
Isoform_33359_32	chr12	+	2360	3	FSM	ENSMUSG00000021226.8	ENSMUST00000021649.8	2196	3	-163	-1	-163	1	multi-exon	FALSE	canonical	3	74	junction_2	1.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTATGTTGTCCTTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	84034471	84040648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84035256_84037267_84037471_84039275
Isoform_33366_166	chr12	+	1588	3	FSM	ENSMUSG00000072949.7	ENSMUST00000168120.3	2272	3	0	684	0	13	multi-exon	FALSE	canonical	3	130	junction_1	2	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGTCCTTCAATCTT	2819	False	NA	24	True	AATAAA	-35	NA	84056263	84064461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84056741_84061152_84061356_84063553
Isoform_33371_3	chr12	+	2594	3	ISM	ENSMUSG00000021228.16	ENSMUST00000021653.8	3431	4	1377	5	432	-5	3prime_fragment	FALSE	canonical	2	7	junction_1	2	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGTCTTGTTTCCTTA	NA	False	NA	NA	False	AATAAA	-15	NA	84100301	84107171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_84100716_84103682_84103886_84105194
Isoform_33372_4	chr12	+	2477	3	ISM	ENSMUSG00000021228.16	ENSMUST00000021653.8	3431	4	1496	3	551	-3	3prime_fragment	FALSE	canonical	2	7	junction_1	2	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTCTTGTTTCCTTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	84100420	84107173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_84100716_84103682_84103886_84105194
Isoform_33373_5	chr12	+	3259	3	FSM	ENSMUSG00000043487.5	ENSMUST00000056822.4	3388	3	133	-4	-45	4	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTGCTGCTGTTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	84147560	84158127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84148203_84153216_84153420_84155713
Isoform_33374_5	chr12	+	721	8	FSM	ENSMUSG00000042523.13	ENSMUST00000123491.8	5727	8	-38	5044	-38	16	multi-exon	FALSE	canonical	2	7	junction_1	4.44007721940573	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTGTGGAGCAGAGT	9874	False	NA	NA	False	AATAGA	-27	NA	84161101	84185247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84161174_84168056_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84185127
Isoform_33376_7	chr12	+	1112	7	ISM	ENSMUSG00000072946.13	ENSMUST00000147363.8	1869	9	21	1925	-4	-404	5prime_fragment	FALSE	canonical	3	204	junction_5	24.1827532666476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAGCTCAATATTTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	84332168	84354802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549
Isoform_33377_16	chr12	+	1171	9	ISM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	129	4846	-4	1033	5prime_fragment	FALSE	canonical	3	204	junction_5	23.3492505233037	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTCAACACATGGAGT	NA	False	NA	3	True	AATAAA	-15	NA	84332134	84357760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692
Isoform_33379_185	chr12	+	3028	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	137	3	4	-3	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTATGACCACTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84332142	84362603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
Isoform_33380_18	chr12	+	2079	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	111	978	-22	0	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTGAGAAGCAGTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	84332116	84361628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
Isoform_33383_7	chr12	+	3098	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	65	5	65	-5	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTTATGACCACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	84332070	84362601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
Isoform_33385_6	chr12	+	1329	10	FSM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	-5	749	1	3	multi-exon	FALSE	canonical	3	10	junction_1	74.1401742114137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGATTCTAGTGTGAT	NA	False	NA	31	True	TTTAAA	-22	NA	84332174	84360879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84332308_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
Isoform_33387_7	chr12	+	2556	13	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	77.4279234729521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTCTTTGGCTCTTGTT	1829	False	NA	9	True	AATAAA	-14	NA	84363871	84390495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_84363949_84366628_84366836_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_33388_10	chr12	+	2532	13	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	75.9171240381393	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1852	False	NA	12	True	AATAAA	-17	NA	84363894	84390498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84385824_84386028_84386875_84387004_84389768
Isoform_33389_496	chr12	+	2332	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	266	-1	0	1	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1849	False	NA	12	True	AATAAA	-17	NA	84363891	84390498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_33390_27	chr12	+	2609	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	-11	-1	-11	1	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1572	False	NA	12	True	AATAAA	-17	NA	84363614	84390498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_33394_12	chr12	+	2319	12	FSM	ENSMUSG00000042472.12	ENSMUST00000222606.2	2284	12	-31	-4	-16	1	multi-exon	FALSE	canonical	3	6	junction_3	61.2357590123466	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1830	False	NA	12	True	AATAAA	-17	NA	84363872	84390498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372376_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_33396_25	chr12	+	2019	10	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.7317782101372	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1846	False	NA	12	True	AATAAA	-17	NA	84363888	84390498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_84363949_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_33397_23	chr12	+	2362	12	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	58.2940678552067	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1854	False	NA	12	True	AATAAA	-17	NA	84363896	84390498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_84363984_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_33401_377	chr12	+	1524	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	73	5	0	-1	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTCTCTTTTCCTCT	NA	False	NA	12	True	AATAAA	-12	NA	84408814	84420565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
Isoform_33402_83	chr12	+	1556	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	41	5	13	-1	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTCTCTTTTCCTCT	NA	False	NA	12	True	AATAAA	-12	NA	84408782	84420565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
Isoform_33407_5	chr12	+	2066	11	FSM	ENSMUSG00000021235.14	ENSMUST00000150391.8	2056	11	-4	-6	0	2	multi-exon	FALSE	canonical	3	205	junction_5	17.0188131196038	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTCTTTTCCTCTTCT	NA	False	NA	15	True	AATAAA	-15	NA	84408812	84420568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
Isoform_33408_5	chr12	+	1877	11	NIC	ENSMUSG00000021235.14	novel	2056	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	20	junction_4	64.7216347135948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTCTTTTCCTCTTCT	NA	False	NA	15	True	AATAAA	-15	NA	84408816	84420568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_84409012_84413658_84413794_84414916_84415484_84417029_84417129_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
Isoform_33410_5	chr12	+	2194	12	FSM	ENSMUSG00000057265.14	ENSMUST00000081828.13	2187	12	-7	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_6	1.49931113658824	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCTGATCATTGTTT	4336	False	NA	NA	False	ATTAAA	-13	NA	84455837	84480554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84456030_84457810_84458040_84460037_84460104_84461347_84461492_84466747_84466829_84470206_84470278_84471909_84472055_84473481_84473976_84475116_84475219_84476778_84476854_84476992_84477108_84480074
Isoform_33412_249	chr12	+	2179	6	FSM	ENSMUSG00000085793.4	ENSMUST00000137170.4	2270	6	89	2	89	-2	multi-exon	FALSE	canonical	3	123	junction_1	15.7810012356631	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGCCCAGGTTTTCCT	NA	False	NA	3	True	AATAAA	-14	NA	84498284	84578345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
Isoform_33413_29	chr12	+	2133	6	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	89	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	52.6399088145107	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGCCCAGGTTTTCCT	NA	False	NA	3	True	AATAAA	-14	NA	84498284	84578345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509181_84576463
Isoform_33416_11	chr12	+	3155	2	FSM	ENSMUSG00000071235.13	ENSMUST00000166772.9	3098	2	-62	5	-62	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGCCTGTGGCCTCCGG	NA	False	NA	NA	False	AATAAA	-17	NA	84687730	84698224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84687912_84695250
Isoform_33417_4	chr12	+	2776	2	FSM	ENSMUSG00000071235.13	ENSMUST00000166772.9	3098	2	-87	409	-87	-409	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGTATCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	84687705	84697820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84687912_84695250
Isoform_33418_62	chr12	+	1616	2	FSM	ENSMUSG00000021241.8	ENSMUST00000223089.2	843	2	-23	-750	-9	1	multi-exon	FALSE	canonical	3	319	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTATCGTGTTTTCA	NA	False	NA	13	True	TATAAA	-16	NA	84820041	84821860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84820146_84820348
Isoform_33419_4	chr12	+	1499	3	ISM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	19	-1	-7	1	intron_retention	FALSE	canonical	3	219	junction_2	50	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTATCGTGTTTTCA	NA	False	NA	13	True	TATAAA	-16	NA	84820043	84821860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_84820146_84820348_84820452_84820566
Isoform_3342_153	chr10	-	2658	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	24	0	-3	0	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGGCTGCTCCTTGTTG	9141	False	NA	-1	True	AATAAA	-16	NA	80537665	80521086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
Isoform_33420_143	chr12	+	853	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	27	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	133.217449641137	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820051	84821856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
Isoform_33422_31	chr12	+	737	3	FSM	ENSMUSG00000021241.8	ENSMUST00000222022.2	485	3	-47	-205	0	-3	multi-exon	FALSE	canonical	3	134	junction_2	92.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820051	84821856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84820146_84820348_84820452_84821316
Isoform_33424_22	chr12	+	832	4	FSM	ENSMUSG00000021241.8	ENSMUST00000222982.2	727	4	-27	-78	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	90.0900783783776	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820051	84821856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84820146_84820369_84820452_84820566_84820683_84821316
Isoform_33425_6	chr12	+	716	3	FSM	ENSMUSG00000021241.8	ENSMUST00000222449.2	374	3	0	-342	0	-3	multi-exon	FALSE	canonical	3	86	junction_1	24	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820051	84821856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84820146_84820369_84820452_84821316
Isoform_33427_1158	chr12	+	708	8	FSM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	35	6	35	0	multi-exon	FALSE	canonical	3	1900	junction_1	151.77601649692	1158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTATGTTGTCTCAA	4664	False	NA	17	True	ATTAAA	-19	NA	85017705	85030071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
Isoform_33430_3	chr12	+	7210	17	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-30	12261	1	-1082	5prime_fragment	FALSE	canonical	3	62	junction_4	25.712275157014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATAATTGAGTCTCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	85043095	85105028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
Isoform_33432_4	chr12	+	6972	20	NIC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	9	0	intron_retention	FALSE	canonical	3	7	junction_17	35.9467134100762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCCCTTTTCTCTTATT	NA	False	NA	31	True	AATAAA	-41	NA	85043103	85117288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85111744_85111876_85116392_85116574_85116878
Isoform_33433_4	chr12	+	5097	16	ISM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	-3	12237	-3	-1081	5prime_fragment	FALSE	canonical	3	22	junction_4	32.2065555783636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATAATTGAGTCTCAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	85043091	85105029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
Isoform_33434_41	chr12	+	4919	20	FSM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	-3	-23	-3	0	multi-exon	FALSE	canonical	3	22	junction_4	30.3797753105983	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTTTTCTCTTATTT	NA	False	NA	32	True	AATAAA	-42	NA	85043091	85117289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
Isoform_33435_3	chr12	+	4419	17	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	32578	19	-13297	4	3prime_fragment	FALSE	canonical	3	85	junction_1	16.8094792825358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATAGGCTGTACAGTAT	NA	False	NA	13	True	AATAAA	-23	NA	85075703	85117270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
Isoform_33436_3	chr12	+	3769	17	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	33224	23	-12651	0	3prime_fragment	FALSE	canonical	3	85	junction_1	16.8094792825358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTCATAGGCTGTACA	NA	False	NA	9	True	AATAAA	-19	NA	85076349	85117266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
Isoform_33437_5	chr12	+	2698	17	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	34318	0	-11557	0	3prime_fragment	FALSE	canonical	3	85	junction_1	16.8094792825358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTTTTCTCTTATTT	NA	False	NA	32	True	AATAAA	-42	NA	85077443	85117289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
Isoform_33444_1045	chr12	+	2737	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	25	2	0	-2	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTCCGGGATCTGTGC	NA	False	NA	18	True	ATTAAA	-18	NA	85157631	85180860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
Isoform_33445_16	chr12	+	3473	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	49	-758	-11	1	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGGAGTAGCTGTT	NA	False	NA	NA	False	TTTAAA	-11	NA	85157655	85181620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
Isoform_33447_20	chr12	+	2847	14	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	0	-4	intron_retention	FALSE	canonical	3	294	junction_6	23.4056079862733	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGCTCCGGGATCTGT	NA	False	NA	16	True	ATTAAA	-16	NA	85157631	85180858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
Isoform_3345_5	chr10	-	3209	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	17	-544	-10	544	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCCGGCCTACAGTTT	9134	False	NA	NA	False	NA	NA	NA	80537672	80520542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
Isoform_33461_17	chr12	+	1432	8	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	119.526446565484	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266283	85273267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_85266499_85266595_85266708_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
Isoform_33462_358	chr12	+	1462	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	8	135	8	0	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266262	85273267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
Isoform_33463_391	chr12	+	1439	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	31	135	-1	0	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266285	85273267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
Isoform_33465_9	chr12	+	1287	7	FSM	ENSMUSG00000004788.12	ENSMUST00000136495.3	957	7	13	-343	11	0	multi-exon	FALSE	canonical	0	0	junction_5	128.430266422418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266299	85273267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85271328_85271396_85272776
Isoform_33468_10	chr12	+	1537	7	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	336	junction_6	13.6188186793944	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266284	85273267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
Isoform_33470_8	chr12	+	1973	3	FSM	ENSMUSG00000045064.6	ENSMUST00000059341.5	4482	3	97	2412	97	0	multi-exon	FALSE	canonical	1	1	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGGTTTGTGCTGGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	85335461	85343720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85335560_85336325_85337656_85343175
Isoform_33471_4	chr12	+	2358	3	FSM	ENSMUSG00000045064.6	ENSMUST00000059341.5	4482	3	109	2015	109	397	multi-exon	FALSE	canonical	1	1	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAAGTGGCTGGTATCC	NA	False	NA	NA	False	TTTAAA	-19	NA	85335473	85344117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85335560_85336325_85337656_85343175
Isoform_33472_19	chr12	+	2109	4	FSM	ENSMUSG00000021250.14	ENSMUST00000021674.7	2108	4	0	-1	0	1	multi-exon	FALSE	canonical	1	1	junction_3	3.85861230093008	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTCTTGCTCTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	85520663	85524048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85520955_85521708_85521961_85522365_85522474_85522590
Isoform_33474_15	chr12	+	1764	4	FSM	ENSMUSG00000034271.17	ENSMUST00000177587.9	1645	4	-123	4	-123	-4	multi-exon	FALSE	canonical	3	23	junction_1	88.8606899715629	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGCCTCGAGTGGTG	6127	False	NA	30	True	AGTAAA	-16	NA	85645677	85686648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85646002_85654906_85655140_85678418_85678524_85685546
Isoform_33479_232	chr12	+	1658	4	FSM	ENSMUSG00000034271.17	ENSMUST00000050687.14	1643	4	-20	5	-20	-5	multi-exon	FALSE	canonical	3	151	junction_1	28.5228952870419	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTGCCTCGAGTGGT	6619	False	NA	29	True	AGTAAA	-15	NA	85646169	85686647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85646389_85654906_85655140_85678418_85678524_85685546
Isoform_33481_3	chr12	+	1796	4	FSM	ENSMUSG00000034271.17	ENSMUST00000050687.14	1643	4	-20	-133	-20	133	multi-exon	FALSE	canonical	3	151	junction_1	28.5228952870419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGAGTACTTGCTTCA	6619	False	NA	NA	False	NA	NA	NA	85646169	85686785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85646389_85654906_85655140_85678418_85678524_85685546
Isoform_33483_4	chr12	+	971	3	FSM	ENSMUSG00000034266.7	ENSMUST00000040536.6	955	3	-24	8	-24	-8	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAGCCCTGGAAAGC	NA	False	NA	NA	False	AATAAA	-10	NA	85733418	85755853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85733748_85736041_85736147_85755316
Isoform_33484_167	chr12	+	3407	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	28	0	28	0	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTCATCATTTAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	85793340	85860359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
Isoform_33486_4	chr12	+	2346	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	-8	1097	-8	-1097	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTCTAATGTCTTAA	NA	False	NA	NA	False	AAGAAA	-17	NA	85793304	85859262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
Isoform_33489_10	chr12	+	4853	34	FSM	ENSMUSG00000012609.20	ENSMUST00000040179.14	5081	34	227	1	-31	0	multi-exon	FALSE	canonical	3	18	junction_33	8.97020883060403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	85871710	86100533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86099916
Isoform_33491_8	chr12	+	4679	33	FSM	ENSMUSG00000012609.20	ENSMUST00000040273.14	4147	33	18	-550	2	-1	multi-exon	FALSE	canonical	3	15	junction_32	9.07864940395872	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	False	NA	4	True	AATAAA	-14	NA	85871760	86100532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
Isoform_33492_3	chr12	+	4921	33	FSM	ENSMUSG00000012609.20	ENSMUST00000040273.14	4147	33	-224	-550	35	-1	multi-exon	TRUE	canonical	3	15	junction_32	9.07864940395872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	False	NA	4	True	AATAAA	-14	NA	85871518	86100532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
Isoform_33493_3	chr12	+	4817	34	NIC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_27	10.6204231756438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	False	NA	4	True	AATAAA	-14	NA	85871742	86100532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986102_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86099916
Isoform_33494_134	chr12	+	784	9	FSM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	-3	2	-3	-1	multi-exon	FALSE	canonical	3	179	junction_5	10.7637992827812	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATTTCTTCCATTCTGT	NA	False	NA	5	True	AATAAA	-15	NA	86129357	86209231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
Isoform_33495_4	chr12	+	673	4	ISM	ENSMUSG00000007867.10	ENSMUST00000220711.2	372	5	21022	-270	21022	0	3prime_fragment	FALSE	canonical	3	187	junction_3	12.1928941054479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	7	True	AATAAA	-17	NA	86207743	86209233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_86207996_86208225_86208302_86208760_86208824_86208951
Isoform_33496_14	chr12	+	3027	2	ISM	ENSMUSG00000097543.2	ENSMUST00000181667.2	3160	5	-2	22174	-2	-22174	intron_retention	FALSE	canonical	3	16	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAATCACAGATCA	NA	False	NA	NA	False	NA	NA	NA	86216112	86219702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_86216220_86216782
Isoform_33498_11	chr12	+	2167	6	ISM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	2	25084	2	2947	5prime_fragment	FALSE	canonical	3	56	junction_1	5.62138772902208	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAAAAACTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	86288650	86313060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955
Isoform_33500_26	chr12	+	4345	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	19	-9	2	9	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGAGGTCTGTTATTAA	NA	False	NA	12	True	AATAAA	-23	NA	86288650	86338567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
Isoform_33503_5	chr12	+	7239	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	5	-2889	5	2889	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTTCCTGCTACTGA	NA	False	NA	NA	False	TATAAA	-22	NA	86288636	86341447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
Isoform_33504_17	chr12	+	4261	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	-9	-423	8	9	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGAGGTCTGTTATTAA	NA	False	NA	12	True	AATAAA	-23	NA	86288639	86338567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
Isoform_33509_978	chr12	+	3878	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	29	-2563	29	0	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTCATGCGTTGTCTGT	NA	False	NA	19	True	AATAAA	-19	NA	86516919	86568402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
Isoform_33510_925	chr12	+	3900	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	1	-2557	1	-3	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86516891	86568396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
Isoform_33530_4	chr12	+	4144	4	FSM	ENSMUSG00000034157.13	ENSMUST00000189246.7	1454	4	3	-2693	3	-2	multi-exon	FALSE	canonical	2	12	junction_1	43.0219582177391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTTGGTCTATTTGCTT	NA	False	NA	5	True	AATAAA	-17	NA	86993819	87012134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_86994025_86999517_86999706_87007045_87007216_87008553
Isoform_33532_4	chr12	+	4127	5	FSM	ENSMUSG00000034157.13	ENSMUST00000190588.2	573	5	-77	-3477	-5	-2	multi-exon	FALSE	canonical	1	1	junction_2	47.8767950055139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTTGGTCTATTTGCTT	NA	False	NA	5	True	AATAAA	-17	NA	86994186	87012134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_86994274_86999517_86999706_87006501_87006603_87007045_87007216_87008553
Isoform_33534_232	chr12	+	4091	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	3	4	3	-4	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTTGGTCTATTTGC	NA	False	NA	3	True	AATAAA	-15	NA	86994119	87012132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
Isoform_33535_4	chr12	+	4164	4	NIC	ENSMUSG00000034157.13	novel	4098	4	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	46.6976087896015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86994125	87012138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_86994274_86999517_86999779_87007045_87007216_87008553
Isoform_33539_3	chr12	+	3397	25	FSM	ENSMUSG00000034145.15	ENSMUST00000110187.8	3327	25	-69	-1	-69	1	multi-exon	TRUE	canonical	1	1	junction_7	2.1586389744981	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACCATGCTGAATCC	NA	False	NA	NA	False	ATTAAA	-23	NA	87073268	87136808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_87073365_87085215_87085365_87099599_87099663_87103161_87103372_87103896_87103977_87104404_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87123965_87124053_87124666_87124733_87128571_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
Isoform_33540_9	chr12	+	1849	9	NIC	ENSMUSG00000021033.12	novel	1571	10	NA	NA	23	-1	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	144.461067419565	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTTTGTCATGGACA	NA	False	NA	12	True	NA	NA	NA	87193961	87211496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_87194283_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
Isoform_33542_462	chr12	+	1657	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-4	3	-4	-3	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCTTTTGTCATGGA	NA	False	NA	10	True	NA	NA	NA	87194487	87211494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
Isoform_33546_31	chr12	+	2963	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	476	junction_5	37.1054756947086	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTTTGTCATGGACA	NA	False	NA	12	True	NA	NA	NA	87194482	87211496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
Isoform_33555_3258	chr12	+	1377	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	1	-1	1	1	multi-exon	TRUE	canonical	3	2699	junction_7	143.152890295656	3258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTTACAATCTATG	NA	False	NA	-1	True	AGTAAA	-17	NA	87313472	87320754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
Isoform_33572_1257	chr12	+	397	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	16	2288	0	-2	multi-exon	FALSE	canonical	3	3495	junction_2	126.36015546401	1257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	30	True	AATAAA	-17	NA	87490681	87496688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
Isoform_33579_3	chr12	+	1856	2	FSM	ENSMUSG00000079034.3	ENSMUST00000110152.3	1873	2	2	15	2	-15	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAGAAAAATATCAAT	NA	False	NA	NA	False	AATAAA	-16	NA	87561087	87565021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_87561276_87563353
Isoform_33580_7	chr12	+	1837	2	FSM	ENSMUSG00000072905.6	ENSMUST00000110147.3	1766	2	5	-76	5	76	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATCAATTC	NA	False	NA	NA	False	AATAAA	-18	NA	87840846	87844705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_87841033_87843054
Isoform_33581_106	chr12	+	2169	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	-9	-2	-9	1	multi-exon	TRUE	canonical	3	29	junction_1	14.3544418212622	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGTTCCTTCTCAATC	NA	False	NA	12	True	AATAAA	-25	NA	88327314	88428491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
Isoform_33582_50	chr12	+	2313	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	-64	4	30	-2	multi-exon	FALSE	canonical	3	17	junction_1	17.7822945651004	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGGGACTGTTCCTTCT	NA	False	NA	7	True	AATAAA	-20	NA	88327353	88428486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
Isoform_33584_3	chr12	+	3352	10	NIC	ENSMUSG00000021044.16	novel	2253	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	17	junction_1	18.6990459913776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGACTGTTCCTTCTCAA	NA	False	NA	10	True	AATAAA	-23	NA	88327425	88428489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88423705_88425779_88425974_88427784
Isoform_33585_3	chr12	+	2158	10	NIC	ENSMUSG00000021044.16	novel	2253	11	NA	NA	31	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	25.9443849630534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGTTCCTTCTCAATC	NA	False	NA	12	True	AATAAA	-25	NA	88327354	88428491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
Isoform_33586_28	chr12	+	2276	11	FSM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	-70	-7	4	1	multi-exon	FALSE	canonical	2	6	junction_1	20.9752234791432	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTCTCAATCATTG	NA	False	NA	16	True	AATAAA	-29	NA	88327588	88428495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_88327743_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
Isoform_33588_5	chr12	+	3911	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	-22	-666	-22	666	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATTGAATGCAATTATT	NA	False	NA	NA	False	AATAAA	-15	NA	95662108	95748547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_95662753_95745280
Isoform_33591_5	chr12	+	7494	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	-163	-4108	-163	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTTTATCTGAGT	NA	False	NA	NA	False	AGTAAA	-20	NA	95661967	95751989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_95662753_95745280
Isoform_33592_107	chr12	+	2043	12	FSM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	7	2	2	1	multi-exon	FALSE	canonical	3	39	junction_2	12.115149999242	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCACATATTTATTATT	NA	False	NA	15	True	NA	NA	NA	98594422	98636072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
Isoform_33595_40	chr12	+	1952	11	FSM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	-38	-1	2	1	multi-exon	FALSE	canonical	3	21	junction_2	15.3766056072203	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCACATATTTATTATT	NA	False	NA	15	True	NA	NA	NA	98594417	98636072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98594594_98598221_98598297_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
Isoform_33603_1085	chr12	+	2608	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	1	905	1	0	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713248	98753107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33605_152	chr12	+	2656	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-47	905	-22	0	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713200	98753107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33606_493	chr12	+	3528	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	3	-17	3	17	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98713250	98754029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33607_52	chr12	+	3557	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-47	4	-22	2	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	98713200	98754008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33615_37	chr12	+	2602	17	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_14	355.505532437612	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713242	98753107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
Isoform_33620_259	chr12	+	2215	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	26	905	1	0	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713248	98753107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33621_124	chr12	+	2257	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	-16	905	-16	0	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713206	98753107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33622_161	chr12	+	3118	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	25	3	0	3	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTGTGTTTAATAATG	NA	False	NA	NA	False	AATAAA	-13	NA	98713247	98754009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33632_40	chr12	+	2554	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	81	junction_9	361.279762326464	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713227	98753107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33635_54	chr12	+	2145	14	FSM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	1	900	1	0	multi-exon	FALSE	canonical	3	91	junction_9	361.05984686441	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713242	98753106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33638_31	chr12	+	2490	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	363.982453789557	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713250	98753106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_33656_28	chr12	+	2299	14	FSM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	-26	-1	-26	1	multi-exon	FALSE	canonical	3	15	junction_7	3.54347470962493	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTTTCACTTTTCAC	NA	False	NA	NA	False	AATAAA	-11	NA	98886806	98949492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
Isoform_33657_20	chr12	+	2301	17	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	153.9589915976	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTACAGGCCTGGA	NA	False	NA	15	True	ATTAAA	-15	NA	99850769	99921474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_99850812_99852736_99852980_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
Isoform_33661_10	chr12	+	2201	11	ISM	ENSMUSG00000021177.17	ENSMUST00000151019.8	3945	14	-6	24256	-6	527	5prime_fragment	FALSE	canonical	3	362	junction_1	49.4125490133832	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATAGGTAGTGTTTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	99850769	99879365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533
Isoform_33662_56	chr12	+	1834	14	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	2	12	combination_of_known_junctions	FALSE	canonical	3	48	junction_13	129.038226527357	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTTAAGAGGGATTGTT	NA	False	NA	15	True	NA	NA	NA	99850777	99885575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
Isoform_33663_14	chr12	+	2044	15	ISM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-47	9653	-27	8204	5prime_fragment	FALSE	canonical	3	362	junction_1	44.7195341511277	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCATGTGTGTATTGGT	NA	False	NA	NA	False	NA	NA	NA	99850748	99911825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498
Isoform_33665_746	chr12	+	2058	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-26	4	-6	1	multi-exon	FALSE	canonical	3	362	junction_1	45.8998910674089	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTACAGGCCTGGA	NA	False	NA	15	True	ATTAAA	-15	NA	99850769	99921474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
Isoform_33676_2447	chr12	+	1532	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	19	40	19	-40	multi-exon	FALSE	canonical	3	1446	junction_1	298.758363899657	2447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGTAATGAGTACCATG	3992	False	NA	18	True	AATAAA	-24	NA	100076431	100089624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
Isoform_33694_3513	chr12	+	1520	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	92	2503	-2	816	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	3513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGGTGTTAAATGCTT	9257	False	NA	26	True	AATAAA	-15	NA	100165785	100173570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
Isoform_33701_220	chr12	+	4023	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	92	0	-2	0	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGAACTGTGTAGGT	9257	False	NA	27	True	AATAAA	-24	NA	100165785	100176073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
Isoform_33716_4	chr12	+	1132	3	ISM	ENSMUSG00000113679.2	ENSMUST00000223300.2	4791	4	13676	3515	0	0	3prime_fragment	FALSE	canonical	2	9	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTCTGAGCTCTGCTCT	NA	False	NA	NA	False	AAAACA	-15	NA	100256543	100263652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_100256684_100261887_100261990_100262762
Isoform_33717_3	chr12	+	1178	3	NNC	ENSMUSG00000113679.2	novel	4791	4	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCACTGGTCTGAGCT	NA	False	NA	NA	False	AAAACA	-8	NA	100256542	100263645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_100256684_100261887_100261990_100262710
Isoform_33718_18	chr12	+	2968	13	FSM	ENSMUSG00000021185.17	ENSMUST00000069782.11	3295	13	77	250	-2	6	multi-exon	FALSE	canonical	2	6	junction_10	4.43471156521669	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAACCTCCAGTGTCTG	NA	False	NA	NA	False	AATAAA	-27	NA	100745392	100838619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
Isoform_33730_156	chr12	+	5733	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	5	-6	5	6	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTGCTTATTGGA	NA	False	NA	17	True	NA	NA	NA	101942251	101972689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
Isoform_33745_62	chr12	+	2955	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	-18	-110	-18	108	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTTTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	102435375	102464274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
Isoform_33746_159	chr12	+	2846	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	-18	-1	-18	1	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAGTGCTTTATATTT	NA	False	NA	NA	False	AATAAA	-19	NA	102435375	102464165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
Isoform_3375_599	chr10	-	4780	31	FSM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	18	7	18	-7	multi-exon	FALSE	canonical	1	82	junction_14	55.4957555934586	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATTTGTGTGTTGTG	9226	False	NA	-9	True	ATTAAA	-7	NA	80578080	80542796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
Isoform_33750_5	chr12	+	3468	13	FSM	ENSMUSG00000021192.17	ENSMUST00000021609.10	3390	13	-79	1	-22	1	multi-exon	FALSE	canonical	2	10	junction_1	41.9333962638637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAGTGCTTTATATTT	NA	False	NA	NA	False	AATAAA	-19	NA	102435371	102464165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_102436241_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
Isoform_33752_81	chr12	+	1873	8	FSM	ENSMUSG00000021194.7	ENSMUST00000021610.7	1883	8	8	2	8	-2	multi-exon	TRUE	canonical	3	24	junction_1	6.51841974088562	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTTTGATTTATTTT	NA	False	NA	22	True	AATAAA	-16	NA	102521235	102531285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_102521430_102522143_102522191_102524724_102524819_102525547_102525617_102527603_102527763_102527925_102528343_102528856_102529333_102530868
Isoform_33754_106	chr12	+	1208	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	0	2159	0	-2159	multi-exon	FALSE	canonical	3	165	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTTGCTTGCTTTAAA	NA	False	NA	2	True	CATAAA	-17	NA	102710020	102711661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_102710426_102710858
Isoform_33755_8	chr12	+	1524	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	-24	1867	-24	-1867	multi-exon	FALSE	canonical	3	165	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGCTTTTTGTACTTT	NA	False	NA	NA	False	NA	NA	NA	102709996	102711953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_102710426_102710858
Isoform_3376_83	chr10	-	4802	31	FSM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	-4	7	-4	-7	multi-exon	FALSE	canonical	1	82	junction_14	55.4957555934586	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATTTGTGTGTTGTG	9204	False	NA	-9	True	ATTAAA	-7	NA	80578102	80542796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
Isoform_33760_1700	chr12	+	3189	12	NNC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	37	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	181.82263630907	1700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTGCTTTTCTGATT	NA	False	NA	28	True	ATTAAA	-9	NA	102724262	102743961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952_102742051_102742080
Isoform_33761_233	chr12	+	3280	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	-24	5	-24	-5	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTGCTTTTCTGATT	NA	False	NA	28	True	ATTAAA	-9	NA	102724201	102743961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
Isoform_33788_178	chr12	+	2784	7	NNC	ENSMUSG00000021203.16	novel	3228	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	65	junction_6	12.7638813323639	178	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCAGTCTGGCTTCTTA	8161	False	NA	NA	False	ATTAAA	-15	NA	103354941	103372603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484_103372384_103372404
Isoform_33791_21	chr12	+	3097	6	NNC	ENSMUSG00000021203.16	novel	3055	5	NA	NA	5	0	intron_retention	FALSE	non_canonical	3	65	junction_5	13.979985693841	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTCTGGCTTCTTAA	8181	False	NA	NA	False	ATTAAA	-16	NA	103354961	103372604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369688_103370484_103372384_103372404
Isoform_33792_21	chr12	+	2742	7	NNC	ENSMUSG00000021203.16	novel	424	4	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	15	junction_1	30.0776772152815	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTGTCAGTCTGGCTT	8434	False	NA	NA	False	ATTAAA	-11	NA	103355214	103372599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_103355368_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484_103372384_103372404
Isoform_33793_4	chr12	+	1032	7	FSM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	-50	-5	-2	5	multi-exon	FALSE	canonical	1	4	junction_4	6.23832242407097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTCCCCTTTCTGTGT	6584	False	NA	10	True	AATAAA	-24	NA	103400467	103406503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659_103405822_103406212
Isoform_33794_8	chr12	+	828	6	FSM	ENSMUSG00000064215.14	ENSMUST00000066701.13	889	6	62	-1	-11	1	multi-exon	FALSE	canonical	3	10	junction_3	3.54400902933387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATTGTTCCCCTTTCT	6649	False	NA	6	True	AATAAA	-20	NA	103400532	103406499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403934_103403965_103405659_103405822_103406212
Isoform_33796_178	chr12	+	2052	5	NIC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-9	737	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	10.7325439668328	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGAGTGTTCACAGAG	NA	False	NA	11	True	AATAAA	-17	NA	104214154	104220665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_104214232_104216398_104217017_104217730_104218005_104218943_104219095_104219733
Isoform_33798_5	chr12	+	2127	5	NIC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-84	737	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	10.7325439668328	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGAGTGTTCACAGAG	NA	False	NA	11	True	AATAAA	-17	NA	104214079	104220665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_104214232_104216398_104217017_104217730_104218005_104218943_104219095_104219733
Isoform_33799_7	chr12	+	2142	6	NNC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-6	740	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28.5278810990231	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTGTTCACAGAGCTT	NA	False	NA	14	True	AATAAA	-20	NA	104214157	104220668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_104214232_104215408_104215499_104216398_104217017_104217730_104218005_104218943_104219095_104219733
Isoform_33800_4	chr12	+	2294	5	NNC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-12	733	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.2535711856502	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGTGAGAGTGTTCAC	NA	False	NA	7	True	AATAAA	-13	NA	104214151	104220661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_104214232_104216155_104217017_104217730_104218005_104218943_104219095_104219733
Isoform_33803_5	chr12	+	2977	2	ISM	ENSMUSG00000079014.5	ENSMUST00000109958.3	2200	6	-6	2193	-6	1443	intron_retention	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTTATCCTT	NA	False	NA	NA	False	ATTAAA	-6	NA	104229374	104233438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_104229474_104230560
Isoform_33804_6	chr12	+	2102	5	Fusion	ENSMUSG00000079014.5_ENSMUSG00000041449.17	novel	1239	4	NA	NA	-2	-807	intron_retention	FALSE	canonical	3	17	junction_3	4.84767985741633	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGATAATTATCTCTG	NA	False	NA	NA	False	AATATA	-13	NA	104214161	104234824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_104214232_104230560_104230695_104231352_104232978_104233914_104234066_104234702
Isoform_33805_253	chr12	+	889	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-14	2050	-12	117	multi-exon	FALSE	canonical	3	651	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTGTGAGTCATTAAA	6346	False	NA	14	True	ATTAAA	-14	NA	104998934	105007115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_104999242_105006533
Isoform_33807_28	chr12	+	979	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-46	1992	-44	175	multi-exon	FALSE	canonical	3	651	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTTGTGTTTTCT	6314	False	NA	27	True	ATTAAA	-39	NA	104998902	105007173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_104999242_105006533
Isoform_33812_5	chr12	+	1259	3	FSM	ENSMUSG00000097929.10	ENSMUST00000180458.9	3282	3	198	1825	198	-1823	multi-exon	FALSE	canonical	3	14	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATATTTGGAGAAGCA	NA	False	NA	29	True	AATAAA	-23	NA	105303050	105348366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105303217_105303488_105303819_105347603
Isoform_33813_3	chr12	+	1380	3	FSM	ENSMUSG00000097929.10	ENSMUST00000180458.9	3282	3	78	1824	78	-1822	multi-exon	FALSE	canonical	3	14	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATTTGGAGAAGCAC	NA	False	NA	30	True	AATAAA	-24	NA	105302930	105348367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105303217_105303488_105303819_105347603
Isoform_33814_4	chr12	+	1184	2	ISM	ENSMUSG00000097929.10	ENSMUST00000180503.3	2876	4	149	1820	149	-1820	intron_retention	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTGGAGAAGCACTT	NA	False	NA	32	True	AATAAA	-26	NA	105303400	105348369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_105303819_105347603
Isoform_33816_17	chr12	+	3866	3	FSM	ENSMUSG00000021070.7	ENSMUST00000001652.7	3792	3	-74	0	-74	0	multi-exon	FALSE	canonical	3	6	junction_1	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGTTTCCCTGTGTCA	NA	False	NA	NA	False	AATAAA	-14	NA	105529410	105561496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105529508_105554455_105554560_105557831
Isoform_33819_18	chr12	+	529	2	FSM	ENSMUSG00000044715.8	ENSMUST00000222284.2	1064	2	538	-3	-17	3	multi-exon	FALSE	canonical	3	132	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGGGTGTAAATACAT	NA	False	NA	NA	False	AATAAA	-18	NA	105651625	105665413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105651718_105664976
Isoform_33821_67	chr12	+	1650	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	-7	1077	-7	-1077	multi-exon	FALSE	canonical	3	113	junction_2	9.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAAGGACCTGGCTCT	NA	False	NA	34	True	AATAAA	-38	NA	105651635	105668205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105651718_105664976_105665236_105666896
Isoform_33823_3	chr12	+	808	4	ISM	ENSMUSG00000041323.7	ENSMUST00000040876.7	3099	18	55400	13598	16101	-13598	internal_fragment	FALSE	canonical	3	37	junction_2	6.54896090146283	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAGTACCACTGTCCAT	NA	False	NA	NA	False	ATTAAA	-21	NA	105727634	105735108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_105727856_105730211_105730281_105732812_105733011_105734788
Isoform_33826_14	chr12	+	1571	5	NIC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	16101	-5	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	14.2653426176871	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAAATTGGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	105727634	105748701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_105727856_105732812_105733011_105734788_105735010_105747108_105747268_105747929
Isoform_33829_616	chr12	+	1086	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-54	1	-1	-1	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGTCTTATTTCTGTG	NA	False	NA	16	True	AATAAA	-19	NA	105750961	105775967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
Isoform_33837_86	chr12	+	3406	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	-616	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	449.844346977859	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGATACAATTTTT	NA	False	NA	5	True	ATTAAA	-15	NA	105750963	105802501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
Isoform_33842_1611	chr12	+	4474	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	39	-133	0	1	multi-exon	FALSE	canonical	3	846	junction_12	378.82265398812	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCCCATAGTTGGCTGG	NA	False	NA	8	True	AATAAA	-14	NA	105750991	105805199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
Isoform_33846_74	chr12	+	4525	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	-8	-137	-8	0	multi-exon	FALSE	canonical	3	846	junction_12	378.82265398812	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750944	105805203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
Isoform_33851_142	chr12	+	4415	21	FSM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	-139	-1671	0	0	multi-exon	FALSE	canonical	3	84	junction_19	453.97952597006	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750991	105805203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
Isoform_33855_98	chr12	+	4501	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	-2	intron_retention	FALSE	canonical	3	81	junction_17	450.308495918741	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCATAGTTGGCTGGTT	NA	False	NA	10	True	AATAAA	-16	NA	105750963	105805201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794542_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
Isoform_33886_5	chr12	+	1928	2	FSM	ENSMUSG00000113835.2	ENSMUST00000220934.2	2076	2	-43	191	-43	-191	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCAGTAAATTTTTATTT	3308	False	NA	NA	False	NA	NA	NA	105866056	105868218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105866201_105866434
Isoform_33889_63	chr12	+	1550	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	-17	209	7	0	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976557	106041459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
Isoform_33890_26	chr12	+	1763	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	-33	12	0	-12	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976541	106041656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
Isoform_33893_278	chr12	+	1483	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	1	2227	1	-1	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976551	106041458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
Isoform_33894_95	chr12	+	1699	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-17	2029	-8	-12	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976533	106041656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
Isoform_33895_15	chr12	+	2924	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-28	815	-19	-815	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGTATACTGTAGC	NA	False	NA	21	True	GATAAA	-16	NA	105976522	106042870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
Isoform_33897_10	chr12	+	4620	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-9	-900	0	900	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTGTCTCTAAT	NA	False	NA	10	True	ATTAAA	-22	NA	105976541	106044585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
Isoform_33898_211	chr12	+	1434	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	55	20	0	0	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976541	106041459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_33900_61	chr12	+	1631	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	55	-177	0	-12	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976541	106041656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_33902_22	chr12	+	3656	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	54	-2201	-1	-5	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTTTTTGTTTATTT	NA	False	NA	12	True	NA	NA	NA	105976540	106043680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_3391_167	chr10	-	837	6	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	211	junction_2	375.955529285047	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634073	80631932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_33911_11	chr12	+	1068	9	NIC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	336.388168638554	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTGAAGGGTAATTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	105976543	106041455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_33918_62	chr12	+	2549	12	FSM	ENSMUSG00000021258.11	ENSMUST00000221167.2	2789	12	241	-1	82	1	multi-exon	FALSE	canonical	3	54	junction_11	12.5217166726353	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTATGTGTGAGTACAGC	NA	False	NA	25	True	AATAAA	-18	NA	108146078	108169617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
Isoform_33919_9	chr12	+	2517	11	NIC	ENSMUSG00000021258.11	novel	2789	12	NA	NA	82	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	19.4483932498291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTATGTGTGAGTACAGC	NA	False	NA	25	True	AATAAA	-18	NA	108146078	108169617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_108146140_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
Isoform_3392_34	chr10	-	1138	6	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	211	junction_2	375.955529285047	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634374	80631932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_33920_9	chr12	+	3869	22	FSM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	291	0	29	0	multi-exon	TRUE	canonical	1	1	junction_11	3.09120616516523	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTATTGACCTACGTT	NA	False	NA	NA	False	AATAAA	-14	NA	108389365	108505823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_108389521_108429785_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
Isoform_33922_3	chr12	+	2193	14	NIC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	49.8333316841806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAGGCTCTGGCTCAC	NA	False	NA	14	True	AATAAA	-14	NA	108520969	108654772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652663_108652725_108654287
Isoform_33923_134	chr12	+	1930	14	FSM	ENSMUSG00000021262.16	ENSMUST00000021689.14	2180	14	247	3	247	0	multi-exon	FALSE	canonical	3	149	junction_6	17.7207129833721	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAGGCTCTGGCTCAC	NA	False	NA	14	True	AATAAA	-14	NA	108521229	108654772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
Isoform_33925_79	chr12	+	2224	14	FSM	ENSMUSG00000021262.16	ENSMUST00000021689.14	2180	14	-47	3	-43	0	multi-exon	FALSE	canonical	3	149	junction_6	17.7207129833721	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAGGCTCTGGCTCAC	NA	False	NA	14	True	AATAAA	-14	NA	108520935	108654772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
Isoform_33928_5	chr12	+	2129	13	FSM	ENSMUSG00000021262.16	ENSMUST00000077735.13	2121	13	-10	2	-10	1	multi-exon	FALSE	canonical	3	17	junction_10	48.559814204294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGGCTCTGGCTCACT	NA	False	NA	15	True	AATAAA	-15	NA	108520968	108654773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108652308_108652376_108652666_108652725_108654287
Isoform_33929_16	chr12	+	2040	15	NNC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	239	1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	61.4242938710004	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGGCTCTGGCTCACT	NA	False	NA	15	True	AATAAA	-15	NA	108521221	108654773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_108521473_108572169_108572271_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
Isoform_33933_51	chr12	+	2533	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	5	3640	5	944	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGATTACGGCAGAAA	NA	False	NA	5	True	AATAAA	-13	NA	108758903	108782434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
Isoform_33934_30	chr12	+	2659	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	3	3516	3	1068	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACTCAGTGACAGTG	NA	False	NA	15	True	AATAAA	-20	NA	108758901	108782558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
Isoform_33936_8	chr12	+	2403	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	-22	3797	-22	787	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCCCAAAAAATACTGCCA	NA	False	NA	NA	False	TTTAAA	-21	NA	108758876	108782277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
Isoform_33949_3	chr12	+	5494	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	684	0	684	0	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTTCTTGTTTGTT	NA	False	NA	25	True	AATAAA	-25	NA	108759582	108786074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
Isoform_33952_6	chr12	+	2813	8	NIC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	25.1054917156728	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGACTTGCCGTGGTC	4873	False	NA	NA	False	NA	NA	NA	108860220	108994372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_108860257_108862817_108862986_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
Isoform_33953_3	chr12	+	2926	9	NNC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.2714938168044	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCCGTGGTCATG	4861	False	NA	NA	False	NA	NA	NA	108860208	108994375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_108860257_108862817_108862986_108863370_108863469_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
Isoform_33955_27	chr12	+	2648	7	NIC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	19.6694913225759	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGACTTGCCGTGGTC	4870	False	NA	NA	False	NA	NA	NA	108860217	108994372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_108860257_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
Isoform_33958_3	chr12	+	1546	6	FSM	ENSMUSG00000040856.18	ENSMUST00000056110.15	4653	6	394	2713	-212	5	multi-exon	FALSE	canonical	2	2	junction_1	11.0995495404093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTAAAGAAATAAGTATG	NA	False	NA	NA	False	NA	NA	NA	109419168	109426549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109419221_109419512_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
Isoform_33960_35	chr12	+	1618	5	FSM	ENSMUSG00000040856.18	ENSMUST00000109844.11	1703	5	5	80	5	2	multi-exon	FALSE	canonical	3	24	junction_4	4.02336923485777	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAGTTAAAGAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	109419385	109426546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
Isoform_33961_3	chr12	+	1701	5	FSM	ENSMUSG00000040856.18	ENSMUST00000109844.11	1703	5	-81	83	-81	-1	multi-exon	FALSE	canonical	3	24	junction_4	4.02336923485777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAATGAGTTAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	109419299	109426543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
Isoform_33964_416	chr12	+	1501	3	FSM	ENSMUSG00000021268.18	ENSMUST00000129245.8	1498	3	-2	-1	-2	1	multi-exon	FALSE	canonical	3	187	junction_2	159.5	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	109506881	109511203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109506983_109509582_109509689_109509909
Isoform_33966_84	chr12	+	1861	10	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	145.012983667321	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_33970_292	chr12	+	1767	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	97.0602261485105	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_33971_111	chr12	+	1686	8	NIC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	137.349249457471	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_33975_573	chr12	+	1545	3	ISM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	-6	26952	-2	1	intron_retention	FALSE	canonical	3	281	junction_2	112.5	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	109506881	109511203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_109506983_109509582_109509733_109509909
Isoform_33979_140	chr12	+	1905	10	FSM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	-6	-3	-2	2	multi-exon	FALSE	canonical	3	71	junction_3	140.228473183437	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_33982_34	chr12	+	1824	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	164.408361633464	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_33985_420	chr12	+	1811	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	241	junction_3	82.0182906430023	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_33988_146	chr12	+	1730	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	128.442792792777	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_34_1149	ERCC-00009	+	966	1	FSM	ERCC-00009A	DQ668364	968	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00009_+_0_1000
Isoform_34011_22	chr12	+	2365	11	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	183.218039504848	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTGAAGTACAAT	2867	False	NA	NA	False	NA	NA	NA	109612565	109628144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109613186_109615587_109615677_109616505_109616590_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
Isoform_34013_52	chr12	+	2357	11	ISM	ENSMUSG00000097451.12	ENSMUST00000238333.2	2746	13	1256	7	2	0	3prime_fragment	FALSE	canonical	3	66	junction_8	178.955888419465	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
Isoform_34015_11	chr12	+	2405	11	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	190.767502473561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTGAAGTACAAT	2867	False	NA	NA	False	NA	NA	NA	109612565	109628144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627141
Isoform_34016_435	chr12	+	2365	11	FSM	ENSMUSG00000097451.12	ENSMUST00000181253.10	2368	11	3	0	3	0	multi-exon	FALSE	canonical	3	396	junction_3	76.4947056991528	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2868	False	NA	NA	False	NA	NA	NA	109612566	109628143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
Isoform_34017_14	chr12	+	2367	11	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	190.764252416432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2868	False	NA	NA	False	ACTAAA	-5	NA	109612566	109628150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624491_109624556_109626156_109626242_109627179
Isoform_34019_50	chr12	+	2314	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	206.409756683934	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTGAAGTACAAT	2867	False	NA	NA	False	NA	NA	NA	109612565	109628144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
Isoform_34020_13	chr12	+	2308	10	NIC	ENSMUSG00000097451.12	novel	1627	11	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	202.636023511841	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTGAAGTACAAT	2868	False	NA	NA	False	NA	NA	NA	109612566	109628144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624491_109624556_109626156_109626242_109627179
Isoform_34021_32	chr12	+	3212	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	66	junction_7	180.249484169054	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
Isoform_34024_225	chr12	+	3221	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	549	junction_7	35.1002092779804	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
Isoform_34026_19	chr12	+	3169	9	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	212.155861043243	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2866	False	NA	NA	False	NA	NA	NA	109612564	109628143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
Isoform_3404_127	chr10	-	739	4	ISM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	628	-3	-31	0	3prime_fragment	FALSE	canonical	3	943	junction_2	138.96362433705	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80633766	80631932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606
Isoform_34042_4	chr12	+	558	2	FSM	ENSMUSG00000097391.9	ENSMUST00000182300.2	694	2	134	2	134	1	multi-exon	FALSE	canonical	3	58	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGCTTGCGTGTCTGTA	4923	False	NA	19	True	AATAAA	-19	NA	109714531	109715890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109714728_109715528
Isoform_34043_3	chr12	+	703	2	FSM	ENSMUSG00000097391.9_ENSMUSG00000093351.3	ENSMUST00000182300.2	694	2	-14	5	-14	-2	multi-exon	FALSE	canonical	3	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATATGCTTGCGTGTCT	4775	False	NA	16	True	AATAAA	-16	NA	109714383	109715887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109714728_109715528
Isoform_34044_3	chr12	+	2703	2	FSM	ENSMUSG00000097391.9_ENSMUSG00000093351.3	ENSMUST00000182300.2	694	2	-2012	3	-1926	0	multi-exon	FALSE	canonical	3	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGCTTGCGTGTCTGT	2777	False	NA	18	True	AATAAA	-18	NA	109712385	109715889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109714728_109715528
Isoform_34046_5	chr12	+	1828	3	FSM	ENSMUSG00000017843.15	ENSMUST00000222276.2	1802	3	-26	0	-26	0	multi-exon	FALSE	canonical	2	8	junction_2	94.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTCTGTGCGTTTTGCA	NA	False	NA	NA	False	ATTAAA	-19	NA	110413527	110417433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110413820_110414405_110414472_110415963
Isoform_34050_119	chr12	+	1901	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	197	junction_1	321.388242421629	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	NA	False	NA	13	True	AATAAA	-18	NA	110413531	110537345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
Isoform_34051_74	chr12	+	2620	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	37	1	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	321.388242421629	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGTGTATTTTCCTAT	NA	False	NA	15	True	AATAAA	-17	NA	110413590	110538123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
Isoform_34054_14	chr12	+	4573	17	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	408.246995549263	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGCTCTATGAAACTAAA	NA	False	NA	1	True	AATAAA	-15	NA	110413561	110549494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
Isoform_34057_43	chr12	+	4367	15	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	30	-1	combination_of_known_junctions	FALSE	canonical	3	190	junction_14	348.147077763267	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	NA	False	NA	2	True	AATAAA	-16	NA	110413583	110549495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
Isoform_34068_159	chr12	+	2288	13	NNC	ENSMUSG00000017843.15	novel	2367	12	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	278.794428447437	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTGTATTTTCCTA	4962	False	NA	14	True	AATAAA	-16	NA	110452213	110538122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537786_110537822
Isoform_34069_48	chr12	+	2351	13	NNC	ENSMUSG00000017843.15	novel	2367	12	NA	NA	-21	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	278.794428447437	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTGTATTTTCCTA	4899	False	NA	14	True	AATAAA	-16	NA	110452150	110538122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537786_110537822
Isoform_34070_82	chr12	+	1578	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	13	776	12	1	multi-exon	FALSE	canonical	3	738	junction_1	90.3704039902189	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCTCTTGTATAAGTAC	4933	False	NA	14	True	AATAAA	-19	NA	110452184	110537346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
Isoform_34072_186	chr12	+	1545	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	46	776	45	1	multi-exon	FALSE	canonical	3	738	junction_1	90.3704039902189	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCTCTTGTATAAGTAC	4966	False	NA	14	True	AATAAA	-19	NA	110452217	110537346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
Isoform_3408_750	chr10	-	878	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	387	-5	-45	5	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCGGAATGAGTGGAGAAGA	NA	False	NA	2	True	AATAAA	-22	NA	80634073	80631927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_34081_31	chr12	+	4066	13	FSM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	42	0	42	0	multi-exon	FALSE	canonical	3	190	junction_12	229.453638502906	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	4963	False	NA	3	True	AATAAA	-17	NA	110452214	110549496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
Isoform_3409_43	chr10	-	1218	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	42	0	-24	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634418	80631932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_34092_28	chr12	+	14380	77	FSM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	-59	21	-59	-21	multi-exon	TRUE	canonical	3	133	junction_1	148.379081411613	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	6412	False	NA	18	True	AATAAA	-19	NA	110567826	110633358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
Isoform_34093_35	chr12	+	14299	77	FSM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	21	22	21	-22	multi-exon	FALSE	canonical	3	133	junction_1	148.379081411613	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTCTTGCCGCTCT	6492	False	NA	17	True	AATAAA	-18	NA	110567906	110633357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
Isoform_3410_183	chr10	-	1187	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	73	0	7	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634387	80631932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_3415_39	chr10	-	1132	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219378.2	533	5	-272	-327	-6	0	multi-exon	FALSE	canonical	3	76	junction_4	475.904664822693	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634400	80631932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633914
Isoform_3418_34	chr10	-	958	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	306	-3	40	0	multi-exon	FALSE	canonical	3	943	junction_2	144.890260197157	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634088	80631932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633812_80633914
Isoform_34181_9	chr12	+	2547	4	NNC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	63.1682057859982	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAGTTTGTAGAAC	5371	False	NA	13	True	AATAAA	-12	NA	110704450	110761456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_110704712_110708563_110708758_110745729_110745913_110759547
Isoform_34183_309	chr12	+	2351	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	28	5	2	-5	multi-exon	FALSE	canonical	3	142	junction_2	4	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAGTTTGTAGAACT	5374	False	NA	14	True	AATAAA	-13	NA	110704453	110761457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110704712_110745729_110745913_110759547
Isoform_34185_24	chr12	+	2459	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	-80	5	-32	-5	multi-exon	FALSE	canonical	3	142	junction_2	4	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAGTTTGTAGAACT	5266	False	NA	14	True	AATAAA	-13	NA	110704345	110761457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110704712_110745729_110745913_110759547
Isoform_34187_25	chr12	+	2600	5	NIC	ENSMUSG00000037957.15	novel	1351	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	61.3977809045246	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGTTTATCCTTTTT	5374	False	NA	NA	False	ATTAAA	-15	NA	110704453	110770672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110763376_110763442_110769838
Isoform_34188_11	chr12	+	2534	4	NIC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	63.2525800966956	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTTGTTTATCCTTTT	5374	False	NA	NA	False	ATTAAA	-14	NA	110704453	110770671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110769838
Isoform_3419_24	chr10	-	1274	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	-9	-4	-9	1	multi-exon	FALSE	canonical	3	943	junction_2	144.890260197157	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCGGAATGAGTGGAG	NA	False	NA	-2	True	AATAAA	-18	NA	80634403	80631931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633812_80633914
Isoform_34192_15	chr12	+	3614	10	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	12	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	23.5880279321607	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTTGCTTTCTTGAT	NA	False	NA	9	True	AGTAAA	-12	NA	110816751	110836426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_110816998_110821433_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835552_110835589_110835749_110835776
Isoform_34194_70	chr12	+	3493	7	FSM	ENSMUSG00000021271.6	ENSMUST00000222460.2	2385	7	-23	-1085	4	2	multi-exon	FALSE	canonical	3	41	junction_4	9.97914491994847	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTCTTGATGTGTGT	NA	False	NA	15	True	AGTAAA	-18	NA	110816716	110836432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
Isoform_34197_9	chr12	+	3358	6	NIC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	19.8232187093822	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTTGCTTTCTTGAT	NA	False	NA	9	True	AGTAAA	-12	NA	110816716	110836426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110833141_110833260_110834583
Isoform_34198_3	chr12	+	1971	4	NNC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	16018	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	29.8477618740315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTTCTTGATGTG	NA	False	NA	12	True	AGTAAA	-15	NA	110832757	110836429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_110832803_110833141_110833260_110834583_110835552_110835589
Isoform_34201_3	chr12	+	4903	10	ISM	ENSMUSG00000021275.17	ENSMUST00000223210.2	6946	20	42839	-928	23261	-3	3prime_fragment	FALSE	canonical	3	18	junction_4	4.59736908123938	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATTCTCTTAATTTTGC	6666	False	NA	10	True	NA	NA	NA	110904745	110938823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
Isoform_34202_3	chr12	+	4696	9	ISM	ENSMUSG00000021275.17	ENSMUST00000223210.2	6946	20	44436	-926	24858	-5	3prime_fragment	FALSE	canonical	3	18	junction_3	4.84122918275927	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATTCTCTTAATTTT	8263	False	NA	8	True	NA	NA	NA	110906342	110938821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
Isoform_34203_3	chr12	+	3919	4	ISM	ENSMUSG00000021275.17	ENSMUST00000223210.2	6946	20	59249	-933	39671	0	3prime_fragment	FALSE	canonical	3	23	junction_1	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAATTTTGCAGTAT	NA	False	NA	15	True	NA	NA	NA	110921155	110938828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_110921257_110934169_110934312_110934725_110934876_110935302
Isoform_34205_125	chr12	+	5687	12	FSM	ENSMUSG00000037896.18	ENSMUST00000084968.14	5684	12	-5	2	-5	-2	multi-exon	FALSE	canonical	3	71	junction_1	9.8114455005324	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATCGCTATGTCCCGT	NA	False	NA	NA	False	AATAAA	-20	NA	111005779	111082333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
Isoform_34212_20	chr12	+	2647	13	NIC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	15.2886577421157	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGTCTCTGTTTTAA	NA	False	NA	17	True	AATATA	-24	NA	111132829	111228993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
Isoform_34215_7	chr12	+	7279	13	NIC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	15.2886577421157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTCTCTGGCTGTGGT	NA	False	NA	10	True	AATAAA	-14	NA	111132787	111233583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
Isoform_34216_40	chr12	+	2583	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-109	4586	-16	2	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTCTCTGTTTTAATAA	NA	False	NA	20	True	AATATA	-27	NA	111132787	111228996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
Isoform_34219_22	chr12	+	7169	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-109	0	-16	0	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGGCTCTCTGGCTGTGG	NA	False	NA	9	True	AATAAA	-13	NA	111132787	111233582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
Isoform_34221_25	chr12	+	1543	12	FSM	ENSMUSG00000021278.8	ENSMUST00000021707.8	1701	12	-10	168	-10	6	multi-exon	FALSE	canonical	3	12	junction_1	7.23969772438711	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCTGGTCCTACTTGTA	NA	False	NA	34	True	AATAAA	-27	NA	111237518	111242692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111237599_111238130_111238250_111238331_111238377_111240576_111240665_111240792_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
Isoform_34222_4	chr12	+	3563	12	FSM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	192	7	-1	-7	multi-exon	FALSE	canonical	0	0	junction_1	2.24896670488236	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTGTGGAGTGGTT	557	False	NA	NA	False	TATAAA	-11	NA	111409094	111421445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111409118_111411362_111411718_111411940_111412572_111414416_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
Isoform_34230_807	chr12	+	3679	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	202	169	2	-5	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAATTTCTGTCTGCT	NA	False	NA	NA	False	ATTAAA	-10	NA	111504651	111513017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_34238_55	chr12	+	3759	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	202	89	2	75	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATAGCTCATGCTTTGA	NA	False	NA	-77	True	AGTAAA	-21	NA	111504651	111513097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_34240_541	chr12	+	3734	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	155	161	-26	3	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504604	111513025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_3425_51	chr10	-	951	5	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-45	1	intron_retention	FALSE	canonical	3	953	junction_4	141.850934082226	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCGGAATGAGTGGAG	NA	False	NA	-2	True	AATAAA	-18	NA	80634073	80631931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80632357_80632424_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_3432_36	chr10	-	1351	4	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-10	0	intron_retention	FALSE	canonical	3	953	junction_3	134.254319193917	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634404	80631932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80632357_80632424_80632657_80633606_80633812_80633914
Isoform_34335_17	chr12	+	3047	13	ISM	ENSMUSG00000007411.17	ENSMUST00000221753.2	2394	18	-529	20745	-1	6444	5prime_fragment	FALSE	canonical	3	404	junction_3	39.6452147876078	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTATCAAGTGGAAGTG	735	False	NA	37	True	AATAAA	-34	NA	111540955	111601304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050
Isoform_34336_208	chr12	+	3395	18	FSM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	-529	-59	-1	1	multi-exon	FALSE	canonical	3	315	junction_16	68.4977205187368	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGCACTGTCTCCT	735	False	NA	NA	False	ATTAAA	-19	NA	111540955	111622653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
Isoform_34337_206	chr12	+	3418	18	FSM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	-551	-60	-23	-1	multi-exon	FALSE	canonical	3	315	junction_16	68.4977205187368	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	713	False	NA	NA	False	ATTAAA	-20	NA	111540933	111622654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
Isoform_34345_43	chr12	+	3351	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	38	junction_16	115.676272415738	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	735	False	NA	NA	False	ATTAAA	-20	NA	111540955	111622654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
Isoform_34346_15	chr12	+	2970	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-24	122	combination_of_known_splicesites	FALSE	canonical	3	38	junction_16	115.676272415738	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	712	False	NA	30	True	ATTAAA	-16	NA	111540932	111622250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
Isoform_34349_39	chr12	+	3389	17	FSM	ENSMUSG00000007411.17	ENSMUST00000084953.13	3365	17	-25	1	-21	-1	multi-exon	FALSE	canonical	3	31	junction_15	118.351634441608	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	715	False	NA	NA	False	ATTAAA	-20	NA	111540935	111622654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
Isoform_34352_77	chr12	+	3324	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	-1	-2	-1	-1	multi-exon	FALSE	canonical	3	91	junction_15	105.235101875119	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	735	False	NA	NA	False	ATTAAA	-20	NA	111540955	111622654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
Isoform_34353_50	chr12	+	3346	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	-23	-2	-23	-1	multi-exon	FALSE	canonical	3	91	junction_15	105.235101875119	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	713	False	NA	NA	False	ATTAAA	-20	NA	111540933	111622654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
Isoform_34357_16	chr12	+	3303	16	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	126.053251533716	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	713	False	NA	NA	False	ATTAAA	-20	NA	111540933	111622654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
Isoform_34367_9	chr12	+	3509	3	FSM	ENSMUSG00000060950.13	ENSMUST00000221089.2	601	3	9	-2917	-2	0	multi-exon	FALSE	canonical	3	64	junction_1	75.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644547	111650336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111644596_111645036_111645397_111647235
Isoform_34368_226	chr12	+	1981	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATTGTCTTGTTCCCA	NA	False	NA	3	True	AATAAA	-15	NA	111644547	111650334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
Isoform_34371_110	chr12	+	2424	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	9	0	-2	0	multi-exon	FALSE	canonical	3	213	junction_2	1	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644547	111650336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111645397_111647235_111647503_111649028
Isoform_34378_11	chr12	+	3085	3	FSM	ENSMUSG00000037787.15	ENSMUST00000162316.2	3107	3	-5	27	1	-27	multi-exon	FALSE	canonical	3	509	junction_1	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	1561	False	NA	NA	False	NA	NA	NA	111679714	111693522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111679853_111689045_111689244_111690773
Isoform_34379_153	chr12	+	1019	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	28	18	3	-18	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAACAAAAGAATTTAAACC	1569	False	NA	NA	False	NA	NA	NA	111679722	111700636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
Isoform_34383_5	chr12	+	996	6	NNC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	28	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	203.498009818278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTTGAGAATAAGCCT	1594	False	NA	NA	False	TTTAAA	-5	NA	111679747	111700658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100_111700622_111700641
Isoform_34386_43	chr12	+	2415	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	41.916157811926	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725297	111761331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111760770
Isoform_34387_13	chr12	+	2449	17	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	20	5	combination_of_known_splicesites	FALSE	canonical	2	22	junction_14	42.3655502000151	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAATGAAAGCCTGTTCA	NA	False	NA	NA	False	ATTAAA	-23	NA	111725302	111773150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111761981_111762113_111772441_111772509_111772748
Isoform_34388_129	chr12	+	2379	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	36	2	combination_of_known_splicesites	FALSE	canonical	2	52	junction_13	31.1312633144811	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCAGAATGAAAGCCTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	111725318	111773147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
Isoform_34389_6	chr12	+	2441	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	30	-6	combination_of_known_splicesites	FALSE	canonical	2	52	junction_13	31.1312633144811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCAAGTGAGTGAGTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	111725312	111773203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
Isoform_34390_60	chr12	+	2249	15	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	36	3	combination_of_known_junctions	FALSE	canonical	2	27	junction_13	36.2404808050278	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	111725318	111773148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111772441_111772509_111772748
Isoform_34391_27	chr12	+	2426	15	NIC	ENSMUSG00000021288.20	novel	2261	14	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_13	44.3616859877245	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725313	111761331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
Isoform_34392_9	chr12	+	2483	17	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	16	-7	combination_of_known_splicesites	FALSE	canonical	2	16	junction_13	44.4675092061608	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGCCTGTTCATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	111725298	111773153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111761981_111762113_111772441_111772509_111772748
Isoform_34393_70	chr12	+	2412	16	FSM	ENSMUSG00000021288.20	ENSMUST00000084941.12	2504	16	36	56	36	-7	multi-exon	FALSE	canonical	2	29	junction_13	35.2026514152935	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGCCTGTTCATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	111725318	111773153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
Isoform_34396_23	chr12	+	2385	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	45.6198242800971	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725303	111761331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111760082_111760134_111760770
Isoform_34398_48	chr12	+	2380	16	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	16	7	combination_of_known_splicesites	FALSE	canonical	2	51	junction_12	36.3315595897317	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGAAAGCCTGTTCATA	NA	False	NA	NA	False	ATTAAA	-25	NA	111725298	111773152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111761981_111762113_111772441_111772509_111772748
Isoform_34399_18	chr12	+	2233	15	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	36	-4	combination_of_known_junctions	FALSE	canonical	2	27	junction_13	41.0915478672007	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGCCTGTTCATAACTA	NA	False	NA	NA	False	ATTAAA	-29	NA	111725318	111773156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111772441_111772509_111772748
Isoform_34400_20	chr12	+	2417	15	NIC	ENSMUSG00000021288.20	novel	2261	14	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_13	47.7933476713303	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725298	111761331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111760082_111760134_111760770
Isoform_34402_28	chr12	+	2405	16	FSM	ENSMUSG00000021288.20	ENSMUST00000122300.8	2268	16	-145	8	19	-7	multi-exon	FALSE	canonical	2	29	junction_13	39.7419453754119	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGCCTGTTCATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	111725301	111773153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111761981_111762113_111772441_111772509_111772748
Isoform_34403_12	chr12	+	2277	15	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	15	7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_13	44.4994840602973	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGAAAGCCTGTTCATA	NA	False	NA	NA	False	ATTAAA	-25	NA	111725297	111773152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111772441_111772509_111772748
Isoform_34404_83	chr12	+	1325	8	FSM	ENSMUSG00000021286.9	ENSMUST00000221375.2	1265	8	-30	-30	-3	-5	multi-exon	FALSE	canonical	3	56	junction_5	290.764860465691	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACACAGCAGGCTCTGG	NA	False	NA	11	True	ATTAAA	-12	NA	111780638	111794815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792009_111792067_111793976_111794120_111794251
Isoform_34405_28	chr12	+	1308	8	NNC	ENSMUSG00000021286.9	novel	1265	8	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_5	314.41348052317	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACACAGCAGGCTCTGG	NA	False	NA	11	True	ATTAAA	-12	NA	111780652	111794815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792009_111792067_111793979_111794120_111794251
Isoform_34406_229	chr12	+	1304	8	FSM	ENSMUSG00000021286.9	ENSMUST00000223211.2	794	8	22	-532	-5	2	multi-exon	FALSE	canonical	3	188	junction_5	258.732309855699	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	18	True	ATTAAA	-19	NA	111780663	111794822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
Isoform_34407_75	chr12	+	1324	8	NNC	ENSMUSG00000021286.9	novel	794	8	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_6	286.13568923338	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	18	True	ATTAAA	-19	NA	111780640	111794822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793979_111794120_111794251
Isoform_34409_617	chr12	+	1273	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	37	-2	-1	2	multi-exon	FALSE	canonical	3	470	junction_5	111.029525602677	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	18	True	ATTAAA	-19	NA	111780640	111794822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
Isoform_34411_64	chr12	+	1271	7	NNC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	264.970700686363	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACACAGCAGGCTCTGG	NA	False	NA	11	True	ATTAAA	-12	NA	111780632	111794815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793979_111794120_111794251
Isoform_34416_8	chr12	+	4799	36	FSM	ENSMUSG00000054003.14	ENSMUST00000079009.11	4809	36	1	9	1	-9	multi-exon	FALSE	canonical	1	1	junction_4	3.2893147974517	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTCTGATTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	111937993	112035279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960364_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111973945_111974011_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992109_111992208_111992273_111992344_111992409_111992686_111992732_111993528_111993583_111997621_111997739_111999112_111999221_112001015_112001117_112002787_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
Isoform_34417_25	chr12	+	2562	15	FSM	ENSMUSG00000037686.7	ENSMUST00000079400.6	2722	15	171	-11	-19	11	multi-exon	TRUE	canonical	2	5	junction_3	6.52467842666814	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGGGTCTGTGGGCTGT	NA	False	NA	13	True	AATAAA	-27	NA	112073283	112094004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112073408_112078625_112078735_112079414_112079527_112080813_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
Isoform_34422_114	chr12	+	1763	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	33	-19	1	-2	multi-exon	FALSE	canonical	3	62	junction_2	10.1005362893924	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTTGACTTCGTCC	NA	False	NA	NA	False	AATAAA	-38	NA	112586511	112607792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
Isoform_34423_17	chr12	+	1699	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	1	77	1	61	multi-exon	FALSE	canonical	3	62	junction_2	10.1005362893924	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCACTGACTGATTGT	NA	False	NA	NA	False	TTTAAA	-43	NA	112586479	112607696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
Isoform_34424_7	chr12	+	1123	6	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	14428	15	-4851	6	3prime_fragment	FALSE	canonical	3	75	junction_2	8.2365041127896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGGTCATTACACCTGT	1565	False	NA	NA	False	AATAAA	-25	NA	112600954	112607779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
Isoform_34425_24	chr12	+	1722	3	ISM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	199	1	-89	-1	intron_retention	FALSE	canonical	3	1739	junction_2	34.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGACTCCCTCCCTTCC	7054	False	NA	16	True	AATAAA	-16	NA	112611311	112615578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_112611519_112613271_112613467_112614258
Isoform_34426_1048	chr12	+	680	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	244	0	-44	0	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7099	False	NA	17	True	AATAAA	-17	NA	112611356	112615579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
Isoform_34427_143	chr12	+	755	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	169	0	-119	0	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7024	False	NA	17	True	AATAAA	-17	NA	112611281	112615579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
Isoform_34431_31	chr12	+	508	3	FSM	ENSMUSG00000064326.14	ENSMUST00000109755.5	333	3	-67	-108	-67	0	multi-exon	FALSE	canonical	3	90	junction_1	805	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7076	False	NA	17	True	AATAAA	-17	NA	112611333	112615579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112611519_112614258_112614416_112615413
Isoform_34433_79	chr12	+	6625	19	FSM	ENSMUSG00000072825.12	ENSMUST00000101018.11	6641	19	12	4	-8	1	multi-exon	FALSE	canonical	0	0	junction_4	23.8627764261712	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTGCCGCCTCGGCCCT	9025	False	NA	27	True	AATAAA	-27	NA	112688619	112713022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
Isoform_34434_17	chr12	+	6519	19	NIC	ENSMUSG00000072825.12	novel	6641	19	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_4	27.3297761913022	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGACTGCCGCCTCGGC	9023	False	NA	24	True	AATAAA	-24	NA	112688617	112713019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707312_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
Isoform_34438_23	chr12	+	1979	11	FSM	ENSMUSG00000052160.8	ENSMUST00000063888.5	1982	11	3	0	3	0	multi-exon	FALSE	canonical	3	9	junction_5	2.92574776766556	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTGTTCTCTCT	4283	False	NA	NA	False	AATAAA	-45	NA	112727091	112735424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112727218_112728959_112729044_112729830_112729998_112730396_112730581_112730881_112731003_112731431_112731560_112733136_112733338_112733931_112734072_112734187_112734354_112734458_112734556_112734859
Isoform_34439_53	chr12	+	1952	5	FSM	ENSMUSG00000037594.12	ENSMUST00000037014.11	1960	5	8	0	8	0	multi-exon	FALSE	canonical	3	27	junction_2	3.74165738677394	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGTTGACTCATT	3909	False	NA	17	True	ATTAAA	-19	NA	112772564	112779872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112773429_112774493_112774631_112775802_112775933_112778082_112778200_112779168
Isoform_3444_3	chr10	-	3704	2	FSM	ENSMUSG00000051067.9	ENSMUST00000219924.2	271	2	-246	-3187	-5	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCAGACGTTTAGATAT	NA	False	NA	NA	False	ATTAAA	-18	NA	80679878	80668637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80671976_80679512
Isoform_34441_3	chr12	+	1471	5	FSM	ENSMUSG00000037594.12	ENSMUST00000037014.11	1960	5	-30	519	-30	15	multi-exon	FALSE	canonical	3	27	junction_2	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATGTTTTACATTTTC	3871	False	NA	NA	False	AAAACA	-19	NA	112772526	112779353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112773429_112774493_112774631_112775802_112775933_112778082_112778200_112779168
Isoform_34445_14	chr12	+	2105	4	ISM	ENSMUSG00000002803.15	ENSMUST00000165079.8	1975	5	8	-6	3	6	intron_retention	FALSE	canonical	3	10	junction_1	18.3726850393609	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940109	112942556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_112940133_112940295_112940603_112940678_112940770_112940872
Isoform_34446_25	chr12	+	1974	5	FSM	ENSMUSG00000002803.15	ENSMUST00000165079.8	1975	5	8	-7	3	7	multi-exon	FALSE	canonical	3	10	junction_1	16.3152535990097	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAAATGTAGATAAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	112940109	112942557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112940133_112940295_112940603_112940678_112940770_112940872_112940992_112941123
Isoform_34447_25	chr12	+	2239	3	FSM	ENSMUSG00000002803.15	ENSMUST00000223368.2	691	3	-303	-1245	-28	-6	multi-exon	FALSE	canonical	3	45	junction_1	3.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATGTAGATAAGTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	112940141	112942559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112940603_112940678_112940770_112940872
Isoform_34449_133	chr12	+	2093	4	FSM	ENSMUSG00000002803.15	ENSMUST00000221104.2	2085	4	-14	6	-14	-6	multi-exon	FALSE	canonical	3	44	junction_3	3.55902608401044	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATGTAGATAAGTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	112940155	112942559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
Isoform_3445_64	chr10	-	3441	2	FSM	ENSMUSG00000051067.9	ENSMUST00000053986.9	3439	2	-5	3	-5	-3	multi-exon	FALSE	canonical	3	10	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCAGACGTTTAGATAT	NA	False	NA	NA	False	ATTAAA	-18	NA	80679878	80668637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80671976_80679775
Isoform_34453_3	chr12	+	2072	4	FSM	ENSMUSG00000002803.15	ENSMUST00000223508.2	724	4	-404	-944	-8	6	multi-exon	FALSE	canonical	2	3	junction_3	21.6384431561566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940161	112942556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941135
Isoform_34454_3	chr12	+	1994	3	FSM	ENSMUSG00000002803.15	ENSMUST00000223287.2	800	3	-24	-1170	-7	-7	multi-exon	FALSE	canonical	0	0	junction_1	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAATGTAGATAAGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	112940162	112942558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112940603_112940872_112940992_112941123
Isoform_34455_5	chr12	+	2288	2	ISM	ENSMUSG00000002803.15	ENSMUST00000220567.2	832	3	-29	-1295	-5	5	intron_retention	FALSE	canonical	3	52	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACCAAATGTAGATAAG	NA	False	NA	NA	False	AATAAA	-14	NA	112940164	112942555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_112940770_112940872
Isoform_34456_4	chr12	+	2158	3	FSM	ENSMUSG00000002803.15	ENSMUST00000220567.2	832	3	-30	-1296	-6	6	multi-exon	FALSE	canonical	3	44	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940163	112942556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112940770_112940872_112940992_112941123
Isoform_34461_31	chr12	+	5532	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-62	10	-62	5	multi-exon	FALSE	canonical	3	64	junction_11	15.2637802253402	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCTGAATGTGTTGG	1317	False	NA	18	True	AATAAA	-30	NA	112978065	113038011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
Isoform_34463_18	chr12	+	3329	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-111	2262	-111	1	multi-exon	TRUE	canonical	3	64	junction_11	15.2637802253402	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATCTTTCTAATGCTCT	1268	False	NA	15	True	AATAAA	-31	NA	112978016	113035759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
Isoform_34467_5	chr12	+	3223	24	FSM	ENSMUSG00000021143.11	ENSMUST00000223502.2	3223	24	-5	5	-5	-4	multi-exon	FALSE	canonical	3	14	junction_13	23.2409910997097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGCAGATCTTTCTAA	1374	False	NA	9	True	AATAAA	-25	NA	112978122	113035753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
Isoform_34469_5	chr12	+	5586	24	FSM	ENSMUSG00000021143.11	ENSMUST00000223502.2	3223	24	-110	-2253	-110	5	multi-exon	FALSE	canonical	3	14	junction_13	23.2409910997097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCTGAATGTGTTGG	1269	False	NA	18	True	AATAAA	-30	NA	112978017	113038011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
Isoform_3447_24	chr10	-	935	3	FSM	ENSMUSG00000035215.10	ENSMUST00000217781.2	646	3	-181	-108	5	0	multi-exon	FALSE	canonical	3	4365	junction_1	93.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	False	NA	-13	True	AATAAA	-25	NA	80691038	80688658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80688935_80689591_80689664_80690451
Isoform_34472_66	chr12	+	2861	21	NIC	ENSMUSG00000021144.15	novel	2826	21	NA	NA	-40	-4	combination_of_known_junctions	FALSE	canonical	3	59	junction_17	171.479699964748	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	9283	False	NA	19	True	ATTAAA	-36	NA	113061857	113100821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
Isoform_34474_374	chr12	+	2814	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	-24	-1	-24	0	multi-exon	FALSE	canonical	3	192	junction_4	117.588629860953	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9299	False	NA	24	True	ATTAAA	-41	NA	113061873	113100826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
Isoform_34478_36	chr12	+	2815	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109726.8	2775	20	-40	0	-40	0	multi-exon	FALSE	canonical	3	59	junction_16	163.105730200924	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9283	False	NA	24	True	ATTAAA	-41	NA	113061857	113100826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
Isoform_34479_404	chr12	+	2779	19	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_3	92.1761598486531	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9283	False	NA	24	True	ATTAAA	-41	NA	113061857	113100826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
Isoform_34494_6	chr12	+	1251	6	ISM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	282	1	-54	-1	intron_retention	FALSE	canonical	3	743	junction_5	5.67802782663136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTGTCGTGTGTGT	5904	False	NA	29	True	AATAAA	-22	NA	113104137	113109125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429
Isoform_34495_553	chr12	+	1165	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	273	1	-63	-1	multi-exon	FALSE	canonical	3	743	junction_5	14.1745076340121	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTGTCGTGTGTGT	5895	False	NA	29	True	AATAAA	-22	NA	113104128	113109125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
Isoform_34497_166	chr12	+	407	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	39	-1	-2	1	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTGTTTTTGTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	113115670	113117498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
Isoform_34498_5	chr12	+	648	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	-202	-1	-202	1	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTGTTTTTGTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	113115429	113117498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
Isoform_34502_15	chr12	+	2454	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	-11	-2	-11	-1	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCGCTGTCTCTGAAAAC	NA	False	NA	NA	False	TATAAA	-13	NA	113120029	113128166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
Isoform_34505_6	chr12	+	2489	8	NNC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	71.3030325370499	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCGCTGTCTCTGAAA	NA	False	NA	NA	False	TATAAA	-11	NA	113120040	113128164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_113120192_113120294_113120374_113120780_113120984_113121149_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
Isoform_34506_3	chr12	+	2674	7	NIC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	-18	1	intron_retention	FALSE	canonical	3	190	junction_5	19.1978007999759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCGCTGTCTCTGAAAA	NA	False	NA	NA	False	TATAAA	-12	NA	113120022	113128165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_113120192_113120294_113120374_113120780_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
Isoform_3451_781	chr10	-	467	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	2	-1	2	1	multi-exon	FALSE	canonical	3	2872	junction_3	751.769616009822	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTCTGTAACTTTG	NA	False	NA	-12	True	AATAAA	-26	NA	80691041	80688657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
Isoform_34515_102	chr12	+	1599	2	FSM	ENSMUSG00000049036.8	ENSMUST00000058491.8	1574	2	-27	2	-27	-2	multi-exon	FALSE	canonical	3	28	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGGCTATTATTCCTG	825	False	NA	17	True	TTTAAA	-27	NA	113149522	113153141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_113149579_113151598
Isoform_34517_35	chr12	+	1915	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	41	2	1	-2	multi-exon	FALSE	canonical	3	41	junction_2	2	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACTTGTGTAATGTC	NA	False	NA	15	True	NA	NA	NA	116011384	116024210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116011487_116018341_116018469_116022524
Isoform_34518_7	chr12	+	4688	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	41	-2771	1	3	multi-exon	FALSE	canonical	3	41	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTGATGTTATTGGGG	NA	False	NA	NA	False	AATAAA	-17	NA	116011384	116026983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116011487_116018341_116018469_116022524
Isoform_34519_6	chr12	+	7207	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	41	-5290	1	2522	multi-exon	FALSE	canonical	3	41	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTTTATTAATGTGTT	NA	False	NA	2	True	NA	NA	NA	116011384	116029502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116011487_116018341_116018469_116022524
Isoform_3452_48	chr10	-	464	4	NIC	ENSMUSG00000035215.10	novel	468	4	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	3	184	junction_3	2016.46428736594	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTCTGTAACTTTG	NA	False	NA	-12	True	AATAAA	-26	NA	80691035	80688657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80688935_80689591_80689664_80690451_80690546_80691014
Isoform_34522_5	chr12	+	5926	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	-365	-1	-365	1	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTAATATGTTTTTTGTTT	NA	False	NA	6	True	AATAAA	-19	NA	116244450	116336712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
Isoform_34526_169	chr12	+	5531	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	28	1	2	-1	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTAATATGTTTTTTGT	NA	False	NA	4	True	AATAAA	-17	NA	116244843	116336710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
Isoform_3453_18	chr10	-	1595	2	FSM	ENSMUSG00000035215.10	ENSMUST00000218931.2	785	2	-12	-798	4	-2	multi-exon	FALSE	canonical	3	4552	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCTGTAACTTTGA	NA	False	NA	-11	True	AATAAA	-27	NA	80691039	80688656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80689664_80690451
Isoform_34530_6	chr12	+	5635	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	-77	2	-77	-2	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGTAATATGTTTTTTG	NA	False	NA	3	True	AATAAA	-16	NA	116244738	116336709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
Isoform_34531_4	chr12	+	5988	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	58	-486	3	486	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTAGTTTCTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	116244873	116337197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
Isoform_34537_70	chr12	+	3796	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-50	938	-50	-938	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTGTCTTTTGTAT	NA	False	NA	3	True	AATAGA	-20	NA	116368971	116424293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34540_8	chr12	+	4248	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-50	486	-50	-486	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTTGCTTACTCCAT	NA	False	NA	NA	False	NA	NA	NA	116368971	116424745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34541_90	chr12	+	6601	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	3	-1920	3	-200	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAGTGCCAAGAATAATA	NA	False	NA	15	True	AATAAA	-20	NA	116369024	116427151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34545_33	chr12	+	3592	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-21	-937	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTCTTTTGTATA	NA	False	NA	4	True	AATAGA	-21	NA	116369000	116424294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34547_30	chr12	+	6470	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-44	-202	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116368977	116427149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34548_37	chr12	+	6425	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3	-200	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAGTGCCAAGAATAATA	NA	False	NA	15	True	AATAAA	-20	NA	116369024	116427151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_3455_18	chr10	-	661	2	FSM	ENSMUSG00000020219.8	ENSMUST00000218149.2	435	2	-11	-215	-8	-7	multi-exon	FALSE	canonical	3	3722	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGCGTGTCACCTCAC	5624	False	NA	-14	True	AATAAA	-18	NA	80736627	80735744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80736094_80736315
Isoform_34551_13	chr12	+	3749	29	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-1	-934	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	53.2768089073186	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116369052	116424297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34552_10	chr12	+	6682	29	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-50	-202	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	53.2768089073186	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116368971	116427149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34553_11	chr12	+	3802	29	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-22	-934	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	53.2768089073186	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116368999	116424297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34557_27	chr12	+	6424	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	1	-201	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	14	True	AATAAA	-19	NA	116369054	116427150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_3456_1496	chr10	-	580	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	184	461	0	-7	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGCGTGTCACCTCAC	5632	False	NA	-14	True	AATAAA	-18	NA	80736619	80735744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80736094_80736315_80736385_80736457
Isoform_34560_8	chr12	+	3913	28	ISM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	77	934	45	-934	3prime_fragment	FALSE	canonical	3	183	junction_1	32.2243081487453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116369098	116424297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34561_7	chr12	+	4044	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-57	-937	intron_retention	FALSE	canonical	3	183	junction_1	32.2243081487453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTCTTTTGTATA	NA	False	NA	4	True	AATAGA	-21	NA	116368964	116424294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34563_7	chr12	+	3932	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	22	-938	intron_retention	FALSE	canonical	3	183	junction_1	32.2243081487453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTGTCTTTTGTAT	NA	False	NA	3	True	AATAGA	-20	NA	116369075	116424293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_34564_7	chr12	+	6840	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3	-201	intron_retention	FALSE	canonical	3	183	junction_1	32.2243081487453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	14	True	AATAAA	-19	NA	116369024	116427150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_3457_116	chr10	-	831	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	178	216	-6	-216	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTGCCCAGCACTT	5626	False	NA	-1	True	NA	NA	NA	80736625	80735499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80736094_80736315_80736385_80736457
Isoform_34572_13	chr12	+	3414	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACTGTCTTTACATAT	NA	False	NA	NA	False	NA	NA	NA	117497511	117720464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
Isoform_34574_8	chr12	+	3965	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-40	507	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATCTAGATACTAGTTC	NA	False	NA	NA	False	TTTAAA	-25	NA	117497467	117720971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
Isoform_34579_7	chr12	+	6467	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-47	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATACCGCTCCTGCCTAG	NA	False	NA	NA	False	AATATA	-12	NA	117497460	117723466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
Isoform_34583_102	chr12	+	2738	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	219	0	-150	0	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807468	117842441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_34584_113	chr12	+	2589	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	371	-3	2	3	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCACCTGTCTGTGGC	NA	False	NA	17	True	AATAAA	-17	NA	117807620	117842444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_34586_14	chr12	+	3018	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	-55	-6	-55	6	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACCTGTCTGTGGCATC	NA	False	NA	20	True	AATAAA	-20	NA	117807194	117842447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_34591_7	chr12	+	3357	9	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	107	junction_2	35.806554916663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGTCACCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	117807616	117842440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117839460_117840640_117840778_117841201
Isoform_34594_74	chr12	+	2587	10	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	33.9643967547428	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807616	117842441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_34595_73	chr12	+	2740	10	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-149	6	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	33.9643967547428	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACCTGTCTGTGGCATC	NA	False	NA	20	True	AATAAA	-20	NA	117807469	117842447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_34603_14	chr12	+	2753	11	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	75.8209074068624	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACCTGTCTGTGGCATC	NA	False	NA	20	True	AATAAA	-20	NA	117807620	117842447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_34605_7	chr12	+	2748	11	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	75.7063405534834	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807616	117842441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_34609_115	chr12	+	4557	2	Intergenic	novelGene_2585	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	68605040	68610273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_68609385_68610060
Isoform_34611_8	chr12	+	3098	3	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-301	48862	multi-exon	FALSE	canonical	3	14	junction_1	12.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	6	True	NA	NA	NA	20246615	20295917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_20247044_20291916_20291978_20293308
Isoform_34612_70	chr12	+	3224	4	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-300	48862	multi-exon	FALSE	canonical	3	38	junction_1	8.73053390247253	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	6	True	NA	NA	NA	20246616	20295917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308
Isoform_34613_10	chr12	+	3277	4	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-355	48860	multi-exon	FALSE	canonical	3	38	junction_1	8.73053390247253	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATAGTCTCCATTATTTT	NA	False	NA	4	True	NA	NA	NA	20246561	20295915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308
Isoform_34615_4	chr12	+	3378	5	Fusion	ENSMUSG00000114041.3_ENSMUSG00000113964.2	novel	567	4	NA	NA	-301	738	intron_retention	FALSE	canonical	2	5	junction_3	20.5836707124847	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGGTCTGTGAGTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	20246615	20328767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20247044_20291589_20291717_20291916_20291978_20325015_20326942_20327931
Isoform_34617_12	chr12	+	1769	4	Fusion	ENSMUSG00000114041.3_ENSMUSG00000113964.2	novel	567	4	NA	NA	-302	738	intron_retention	FALSE	canonical	1	2	junction_2	4.49691252107735	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGGTCTGTGAGTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	20246614	20328767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20247044_20325015_20325414_20326835_20326942_20327931
Isoform_34618_24	chr12	+	3193	3	Fusion	ENSMUSG00000114041.3_ENSMUSG00000113964.2	novel	567	4	NA	NA	-300	742	intron_retention	FALSE	canonical	2	8	junction_1	2.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGTGAGTTTCCTGT	NA	False	NA	NA	False	AATAAA	-3	NA	20246616	20328771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20247044_20325015_20326942_20327931
Isoform_34619_4	chr12	+	2262	4	Fusion	ENSMUSG00000114041.3_ENSMUSG00000113964.2	novel	567	4	NA	NA	-298	739	intron_retention	FALSE	canonical	0	0	junction_2	5.35412613473634	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGGTCTGTGAGTTTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	20246618	20328768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20247044_20325015_20325910_20326835_20326942_20327931
Isoform_34620_15	chr12	+	709	4	Fusion	ENSMUSG00000116606.2_ENSMUSG00000112951.3	novel	654	4	NA	NA	-300	-1589	multi-exon	FALSE	non_canonical	0	0	junction_1	60.8331050224026	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	20465637	20483829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20465889_20465927_20466065_20483306_20483434_20483635
Isoform_34621_3	chr12	+	898	4	Fusion	ENSMUSG00000116606.2_ENSMUSG00000112951.3	novel	654	4	NA	NA	-300	-104	multi-exon	FALSE	canonical	3	59	junction_1	36.5543735033473	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATGTCATCAATGTGG	NA	False	NA	NA	False	NA	NA	NA	20465637	20485314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20485031
Isoform_34622_12	chr12	+	1255	4	Fusion	ENSMUSG00000116537.2_ENSMUSG00000116606.2_ENSMUSG00000112951.3	novel	654	4	NA	NA	-300	-18	multi-exon	FALSE	canonical	3	21	junction_3	53.2228021309163	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	TATAAA	-14	NA	20465637	20509194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20508554
Isoform_34623_3	chr12	+	4077	5	Fusion	ENSMUSG00000116537.2_ENSMUSG00000116606.2_ENSMUSG00000112951.3	novel	654	4	NA	NA	-283	2853	multi-exon	TRUE	non_canonical	0	0	junction_4	56.6347949585765	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATCAAATAAACCAA	NA	False	NA	NA	False	NA	NA	NA	20465654	20512065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20508554_20511090_20511121
Isoform_34624_36	chr12	+	1069	2	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3	novel	739	2	NA	NA	-300	-16	multi-exon	FALSE	canonical	3	27	junction_1	0	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	TATAAA	-16	NA	20465637	20509196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20466065_20508554
Isoform_34625_22	chr12	+	3918	3	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3	novel	739	2	NA	NA	-300	2863	multi-exon	TRUE	non_canonical	0	0	junction_2	13.5	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	20465637	20512075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20466065_20508554_20511090_20511119
Isoform_34627_6	chr12	+	1455	2	Genic_Genomic	ENSMUSG00000113749.2_ENSMUSG00000112951.3	novel	721	1	NA	NA	-300	210	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACAGCC	NA	False	NA	NA	False	AATAAA	-34	NA	20465637	20468653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_20466065_20467625
Isoform_34628_8	chr12	+	2265	3	Fusion	ENSMUSG00000114025.2_ENSMUSG00000113294.2	novel	1214	3	NA	NA	-298	-507	intron_retention	FALSE	canonical	1	6	junction_1	44.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	3	True	NA	NA	NA	17931899	17954169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_17932324_17950987_17951049_17952389
Isoform_3463_31	chr10	-	542	3	FSM	ENSMUSG00000020219.8	ENSMUST00000219896.2	542	3	-7	7	-7	-7	multi-exon	FALSE	canonical	3	269	junction_2	1726.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGCGTGTCACCTCAC	5625	False	NA	-14	True	AATAAA	-18	NA	80736626	80735744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80736094_80736315_80736385_80736502
Isoform_34640_11	chr12	+	2128	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10191	-507	intron_retention	FALSE	canonical	3	10	junction_1	60.256857608814	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	3	True	NA	NA	NA	17942198	17954169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_17942310_17950611_17950788_17950987_17951049_17952389
Isoform_34641_3	chr12	+	4034	4	Genic_Genomic	ENSMUSG00000116815.2_ENSMUSG00000113724.2	novel	1785	1	NA	NA	-220	1702	multi-exon	FALSE	canonical	0	0	junction_2	12.9700509722291	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTATTTGGTTGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	18660164	18701701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202
Isoform_34644_4	chr12	+	2819	4	Genic_Genomic	ENSMUSG00000116815.2_ENSMUSG00000113724.2	novel	1785	1	NA	NA	-300	407	multi-exon	FALSE	canonical	0	0	junction_2	12.9700509722291	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACTGGAGAGAAATCTA	NA	False	NA	-1	True	NA	NA	NA	18660084	18700406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202
Isoform_34645_55	chr12	+	1804	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9694	2	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCTCAGCTTGCAGTC	660	False	NA	20	True	AATACA	-29	NA	104343728	104360518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
Isoform_34649_3	chr12	+	2361	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9695	558	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCCCAGGCAGTGTT	659	False	NA	NA	False	AATAAA	-15	NA	104343727	104361074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
Isoform_34650_5	chr12	+	1824	6	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9682	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.8245024464475	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTCTCAGCTTGCAGT	672	False	NA	19	True	AATACA	-28	NA	104343740	104360517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_104343932_104347607_104347641_104355322_104355972_104357714_104357989_104358900_104359052_104359991
Isoform_34653_18	chr12	+	3393	4	Genic_Genomic	ENSMUSG00000113901.2	novel	130	1	NA	NA	-274	14961	multi-exon	FALSE	canonical	1	2	junction_3	16.539514973407	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTTTATAGTCTCCATT	NA	False	NA	NA	False	NA	NA	NA	20121608	20136973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_20122009_20132442_20132570_20132771_20132833_20134168
Isoform_34656_8	chr12	+	4124	4	Fusion	ENSMUSG00000116558.2_ENSMUSG00000116715.2	novel	883	3	NA	NA	-306	2044	multi-exon	FALSE	canonical	2	4	junction_2	22.69116323349	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	20362209	20374840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336
Isoform_34657_3	chr12	+	478	3	Intergenic	novelGene_2447	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	28	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTGTTATTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	19116355	19123893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_19116514_19123371_19123499_19123700
Isoform_34658_32	chr12	+	2875	4	Intergenic	novelGene_2448	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	34.2150064542836	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTTGTATTTTGTTGTT	NA	False	NA	8	True	AATAAA	-13	NA	19116372	19127636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_19116514_19123371_19123499_19123700_19123762_19125090
Isoform_34662_4	chr12	+	960	2	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-300	37	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCATCAGGTTTATTCA	NA	False	NA	55	True	NA	NA	NA	18042833	18112502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_18043260_18111968
Isoform_34663_4	chr12	+	3109	3	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-288	-6	intron_retention	FALSE	canonical	3	7	junction_2	3.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	18042845	18115605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_18043260_18111968_18113829_18114770
Isoform_34664_19	chr12	+	1086	3	Fusion	ENSMUSG00000113416.2_ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-300	36	multi-exon	FALSE	canonical	3	20	junction_2	10	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCATCAGGTTTATTC	NA	False	NA	54	True	NA	NA	NA	18042833	18112501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_18043260_18074048_18074176_18111968
Isoform_34665_5	chr12	+	3251	4	Fusion	ENSMUSG00000113416.2_ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-298	-1	intron_retention	FALSE	canonical	3	7	junction_3	13.5728487143349	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGGTCTGTGAGTTTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	18042835	18115610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr12_+_18043260_18074048_18074176_18111968_18113829_18114770
Isoform_34668_51	chr12	+	1910	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7309	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76948950	76968186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
Isoform_34669_41	chr12	+	855	2	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	-43	-2159	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTTGCTTGCTTTAAA	NA	False	NA	2	True	CATAAA	-17	NA	102709977	102711661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_102710030_102710858
Isoform_34671_7	chr12	+	3236	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7397	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	57.1080846582455	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTGGTGCCTCTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	81066184	81233184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_81066280_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
Isoform_34672_30	chr12	+	3205	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7398	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	44.458470009162	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGGTGCCTCTTTCTT	NA	False	NA	14	True	AATAAA	-16	NA	81066183	81233185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_81066280_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
Isoform_34673_9	chr12	+	3596	8	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2969	4	at_least_one_novel_splicesite	FALSE	non_canonical	3	15	junction_3	73.4608044872799	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30631455	30641218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30635468_30635590_30637198_30637254_30638472_30638567_30638650_30640574_30640594
Isoform_34674_13	chr12	+	2377	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-1681	1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	278.776903604784	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGTGTATTTTCCTAT	3239	False	NA	15	True	AATAAA	-17	NA	110450490	110538123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_110450715_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
Isoform_34680_21	chr12	+	3388	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	819	-8497	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGGTTGTTCTATAAAA	239	False	NA	NA	False	AATAAA	-19	NA	76417858	76435227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_76418019_76431999
Isoform_34681_10	chr12	+	3621	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	877	-8206	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTTTTTAATGTGAAT	297	False	NA	NA	False	AATAAA	-16	NA	76417916	76435518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_76418019_76431999
Isoform_34683_22	chr12	+	5311	3	Intergenic	novelGene_2795	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGTCTTGGCTCCA	660	False	NA	7	True	NA	NA	NA	104343728	104349127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_104344989_104345053_104347657_104347679
Isoform_34687_4	chr12	+	7116	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-214	819	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	114.79547029391	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTACACTGACTTGTG	NA	False	NA	9	True	ATTAAA	-18	NA	52550540	52616437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_52550660_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
Isoform_34690_9	chr12	+	1155	3	NNC	ENSMUSG00000097929.10	novel	3282	3	NA	NA	-61	-1823	intron_retention	FALSE	canonical	3	11	junction_1	10.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATATTTGGAGAAGCA	NA	False	NA	29	True	AATAAA	-23	NA	105303190	105348366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_105303253_105303488_105303819_105347603
Isoform_34691_5	chr12	+	1246	3	NNC	ENSMUSG00000097929.10	novel	3282	3	NA	NA	-148	-1819	intron_retention	FALSE	canonical	3	11	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGGAGAAGCACTTC	NA	False	NA	33	True	AATAAA	-27	NA	105303103	105348370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_105303253_105303488_105303819_105347603
Isoform_34692_8	chr12	+	1753	2	Intergenic	novelGene_2798	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCTTGGTTATGGTG	NA	False	NA	NA	False	NA	NA	NA	105043743	105082788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_105043885_105081176
Isoform_34694_8	chr12	+	6991	2	Antisense	novelGene_ENSMUSG00000113160.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	23748051	23916780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_23754819_23916556
Isoform_34696_8	chr12	+	1592	11	NNC	ENSMUSG00000059060.16	novel	1858	11	NA	NA	-30	-5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	18.8191391939164	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCGGGGTCTCCAAAG	8683	False	NA	2	True	AATAAA	-35	NA	79344094	79861147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_79344197_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963_79850043_79860715
Isoform_34699_3	chr12	+	673	2	Intergenic	novelGene_2830	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTAAGTAGAACATTTGT	NA	False	NA	NA	False	NA	NA	NA	109918215	109919712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_109918700_109919523
Isoform_34704_3	chr12	+	3602	20	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	5036	448	intron_retention	FALSE	canonical	1	4	junction_1	36.7627717268645	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTGCTTTCTGTCTAA	7822	False	NA	7	True	AATAAA	-16	NA	3921226	3958995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_3921290_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_34705_3	chr12	+	3809	20	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	4831	450	intron_retention	FALSE	canonical	1	4	junction_1	36.7627717268645	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	7617	False	NA	9	True	AATAAA	-18	NA	3921021	3958997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_3921290_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_34706_3	chr12	+	3576	2	Genic_Genomic	ENSMUSG00000113600.2	novel	680	1	NA	NA	-2930	178	multi-exon	FALSE	canonical	1	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAGA	7656	False	NA	NA	False	TTTAAA	-4	NA	69166944	69170732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_69166981_69167192
Isoform_34708_8	chr12	+	2479	12	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	59.1121640094854	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1572	False	NA	11	True	AATAAA	-16	NA	84363614	84390497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_84363820_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_34709_4	chr12	+	2619	4	Genic_Genomic	ENSMUSG00000116705.2	novel	393	1	NA	NA	-10378	-305	multi-exon	FALSE	canonical	3	8	junction_1	8.16496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	19447970	19458436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_19448114_19454315_19454443_19454644_19454706_19456148
Isoform_3471_921	chr10	-	3368	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	3	-1	3	1	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3114	False	NA	0	True	AATAAA	-18	NA	80754076	80737196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
Isoform_34711_8	chr12	+	639	2	NNC	ENSMUSG00000096199.3	novel	3840	2	NA	NA	367	-3253	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACTACTATCATCATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	4284393	4286697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_4284698_4286362
Isoform_34712_4	chr12	+	3876	2	NNC	ENSMUSG00000096199.3	novel	3840	2	NA	NA	375	-8	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTCATTACCTA	NA	False	NA	NA	False	AATAAA	-20	NA	4284401	4289942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_4284698_4286362
Isoform_34714_6	chr12	+	2267	2	Intergenic	novelGene_2665	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	80057305	80062765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_80057457_80060649
Isoform_34717_5	chr12	+	7070	29	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	12	-225	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11.0339804463211	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCACGGAGTTTTA	NA	False	NA	4	True	AATAAA	-14	NA	25024939	25109471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_25025087_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
Isoform_34718_3	chr12	+	2563	3	Intergenic	novelGene_2464	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCAGGTTTGGTTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	22108615	22123789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_22108865_22112149_22112205_22121530
Isoform_34719_3	chr12	+	956	3	Intergenic	novelGene_2465	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGCTGAGCACCAGGA	NA	False	NA	NA	False	NA	NA	NA	22108645	22122212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_22108865_22112149_22112205_22121530
Isoform_34720_4	chr12	+	1559	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-17600	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.6262900483478	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGACTTGCCGTGGTC	NA	False	NA	NA	False	NA	NA	NA	108969127	108994372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_108969174_108990888_108991060_108992335_108992477_108993171
Isoform_34722_3	chr12	+	3389	10	NNC	ENSMUSG00000055884.9	novel	563	3	NA	NA	-5136	-332	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	41.1582312545134	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCAATATTTAACATGAA	NA	False	NA	4	True	AATAAA	-17	NA	65159869	65178500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_65160036_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
Isoform_34724_3	chr12	+	3056	2	NNC	ENSMUSG00000071235.13	novel	516	2	NA	NA	353	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGTGGCCTCCGGGAT	NA	False	NA	NA	False	AATAAA	-20	NA	84688145	84698227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_84688225_84695250
Isoform_34726_3	chr12	+	3496	8	NNC	ENSMUSG00000044912.12	novel	3043	6	NA	NA	-36268	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.494871659305393	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAATGAACATGTGAAA	NA	False	NA	NA	False	AATAAA	-20	NA	74172722	74314683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_74172848_74176145_74176326_74208829_74209651_74269355_74269569_74275988_74276243_74281582_74282024_74284954_74285145_74313411
Isoform_34728_3	chr12	+	2532	2	NNC	ENSMUSG00000097061.3	novel	2545	2	NA	NA	-32	1798	intron_retention	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAACATGTCTGTA	2081	False	NA	NA	False	NA	NA	NA	69243952	69248439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_69246313_69248267
Isoform_34730_4	chr12	+	1968	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-40583	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.0596049901365	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGACTTGCCGTGGTC	NA	False	NA	NA	False	NA	NA	NA	108946144	108994372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_108946266_108946370_108946426_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
Isoform_34731_4	chr12	+	1821	4	Intergenic	novelGene_2500	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCTGTGTTCTGGACT	5506	False	NA	NA	False	AATAAA	-30	NA	31275746	31284070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_31275785_31277051_31277275_31279404_31279536_31282641
Isoform_34734_6	chr12	+	2096	16	NNC	ENSMUSG00000079108.7	novel	3642	16	NA	NA	-35	-413	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	319.269722265603	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	55276917	55309392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_55277078_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_3474_43	chr10	-	3437	11	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	3	1	intron_retention	FALSE	canonical	3	226	junction_7	23.5501592351305	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3114	False	NA	0	True	AATAAA	-18	NA	80754076	80737196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
Isoform_34740_4	chr12	+	1560	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-5172	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	31.6262900483478	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGACTTGCCGTGGTC	NA	False	NA	NA	False	NA	NA	NA	108981555	108994372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_+_108981603_108990888_108991060_108992335_108992477_108993171
Isoform_34747_35	chr12	-	175	1	Intergenic	novelGene_2521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCCAGGCG	NA	False	NA	NA	False	NA	NA	NA	43804768	43804593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_43804600_43804800
Isoform_34750_13	chr12	+	175	1	Intergenic	novelGene_2522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAATAGGTTGG	NA	False	NA	NA	False	NA	NA	NA	45660525	45660700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_45660500_45660700
Isoform_34752_18	chr12	-	200	1	Intergenic	novelGene_2523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGCTCAG	NA	False	NA	NA	False	NA	NA	NA	47333450	47333250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_47333200_47333400
Isoform_34753_14	chr12	+	177	1	Intergenic	novelGene_2524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1936	False	NA	NA	False	NA	NA	NA	47814940	47815117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_47814900_47815100
Isoform_34754_8	chr12	+	175	1	Intergenic	novelGene_2525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	49328783	49328958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_49328800_49329000
Isoform_34755_4	chr12	+	2966	1	FSM	ENSMUSG00000020950.11	ENSMUST00000179669.3	3973	1	1013	-6	889	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATATTTTTGTCTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	49430678	49433644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_49430700_49433600
Isoform_34756_24	chr12	+	182	1	Intergenic	novelGene_2526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	50873573	50873755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_50873600_50873800
Isoform_34757_10	chr12	+	495	1	Intergenic	novelGene_2527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGGGTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	51022202	51022697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51022200_51022700
Isoform_34761_6	chr12	+	2816	1	Intergenic	novelGene_2528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGACAAAAAAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	51022234	51025050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51022200_51025000
Isoform_34762_8	chr12	+	187	1	Intergenic	novelGene_2529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGTGGTGGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	51263094	51263281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51263100_51263300
Isoform_34763_7	chr12	+	177	1	Intergenic	novelGene_2530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGTAAAATGCTAC	NA	False	NA	NA	False	NA	NA	NA	51346273	51346450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51346300_51346400
Isoform_34765_3	chr12	+	1562	1	NIC	ENSMUSG00000096199.3	novel	3840	2	NA	NA	14	-4348	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGATGGGAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4284040	4285602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_4284000_4285600
Isoform_34769_5	chr12	+	173	1	Intergenic	novelGene_2531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATGGGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	51435427	51435600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51435400_51435600
Isoform_3477_14	chr10	-	3542	10	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	4	-5	intron_retention	FALSE	canonical	3	226	junction_6	24.8108896840396	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAGCCTCAGAGTAGAT	3115	False	NA	-6	True	AATAAA	-12	NA	80754075	80737202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
Isoform_34770_3	chr12	+	206	1	Intergenic	novelGene_2532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGTGAAATGAC	NA	False	NA	NA	False	NA	NA	NA	51635921	51636127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51635900_51636100
Isoform_34772_11	chr2	-	179	1	Intergenic	novelGene_6537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAAAATATATG	NA	False	NA	NA	False	NA	NA	NA	122372972	122372793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_122372800_122373000
Isoform_34773_43	chr12	+	181	1	Intergenic	novelGene_2533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACCCACCTGATCCT	NA	False	NA	NA	False	NA	NA	NA	51728186	51728367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51728200_51728400
Isoform_34774_3	chr12	+	2732	1	Intergenic	novelGene_2534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	51733183	51735915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51733200_51735900
Isoform_34778_7	chr12	+	176	1	Intergenic	novelGene_2535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAATAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	51859635	51859811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51859600_51859800
Isoform_34779_52	chr12	-	170	1	Intergenic	novelGene_2536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATAAATCTTTTTTT	8305	False	NA	NA	False	NA	NA	NA	51931629	51931459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_51931500_51931600
Isoform_34780_3	chr12	+	177	1	Intergenic	novelGene_2537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTTCATACTAT	NA	False	NA	NA	False	NA	NA	NA	51953497	51953674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_51953500_51953700
Isoform_34781_15	chr12	-	207	1	Intergenic	novelGene_2538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCCCTGGAGATGTGTG	7979	False	NA	NA	False	NA	NA	NA	51986113	51985906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_51985900_51986100
Isoform_34783_3	chr12	-	857	1	Genic_Genomic	ENSMUSG00000035181.7	novel	NA	NA	NA	NA	-44	-28256	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAAGCCCT	9955	False	NA	NA	False	ACTAAA	-32	NA	52018148	52017291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_52017300_52018100
Isoform_34785_50	chr12	+	218	1	Intergenic	novelGene_2539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	AAAACA	-15	NA	52020388	52020606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_52020400_52020600
Isoform_34786_230	chr12	+	239	1	Intergenic	novelGene_2399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGCCAACCAACTGAAC	NA	False	NA	NA	False	AATGAA	-27	NA	4351055	4351294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4351100_4351300
Isoform_3479_23	chr10	-	3365	4	FSM	ENSMUSG00000048240.15	ENSMUST00000092285.10	3362	4	-8	5	-8	0	multi-exon	FALSE	canonical	2	3	junction_3	3.68178700572909	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTCGACTCTAAAT	4436	False	NA	-5	True	AATAAA	-14	NA	80850767	80784462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80787581_80788664_80788781_80833825_80833879_80850689
Isoform_34793_61	chr12	+	168	1	Intergenic	novelGene_2540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	52633472	52633640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_52633500_52633600
Isoform_34796_4	chr12	+	159	1	Intergenic	novelGene_2541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52919515	52919674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_52919500_52919700
Isoform_34797_9	chr12	+	2805	1	Antisense	novelGene_ENSMUSG00000035105.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTCGAAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	54226863	54229668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_54226900_54229700
Isoform_34798_41	chr14	-	177	1	Intergenic	novelGene_3710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	102096439	102096262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_102096300_102096400
Isoform_34799_4	chr12	-	2542	1	NIC	ENSMUSG00000035105.6	novel	2662	5	NA	NA	23	-22315	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54250623	54248081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_54248100_54250600
Isoform_34800_33	chr12	-	174	1	Intergenic	novelGene_2542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGGACAAACATGTG	1336	False	NA	NA	False	NA	NA	NA	54458139	54457965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_54458000_54458100
Isoform_34802_5	chr12	+	175	1	Intergenic	novelGene_2401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATTTAAATTTATA	6762	False	NA	NA	False	NA	NA	NA	4466403	4466578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4466400_4466600
Isoform_34803_3	chr12	-	197	1	Intergenic	novelGene_2543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAATTGCACTCTTAGG	3750	False	NA	NA	False	NA	NA	NA	54652756	54652559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_54652600_54652800
Isoform_34804_22	chr12	+	181	1	Intergenic	novelGene_2544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	54688552	54688733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54688600_54688700
Isoform_34807_46	chr12	+	175	1	Intergenic	novelGene_2545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGTAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	54716266	54716441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54716300_54716400
Isoform_34808_13	chr12	+	154	1	Intergenic	novelGene_2402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4500763	4500917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4500800_4500900
Isoform_34809_33	chr12	+	173	1	Intergenic	novelGene_2546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATTCAGCCAGGCA	2373	False	NA	NA	False	NA	NA	NA	54732113	54732286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54732100_54732300
Isoform_3481_14	chr10	-	3683	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	106	7	-12	-4	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTATTTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	80873154	80864378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
Isoform_34810_24	chr12	-	181	1	Intergenic	novelGene_2547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTAGTCATCACC	NA	False	NA	NA	False	NA	NA	NA	54747729	54747548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_54747500_54747700
Isoform_34812_22	chr12	+	229	1	Intergenic	novelGene_2549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTCCTCAAAATTT	NA	False	NA	NA	False	NA	NA	NA	54771208	54771437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54771200_54771400
Isoform_34813_4	chr12	+	145	1	Intergenic	novelGene_2548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	54762493	54762638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54762500_54762600
Isoform_34815_5	chr12	-	407	1	Intergenic	novelGene_2550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54846795	54846388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_54846400_54846800
Isoform_34818_47	chr12	+	176	1	Intergenic	novelGene_2551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATGCAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	54852004	54852180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54852000_54852200
Isoform_34819_15	chr12	-	183	1	Intergenic	novelGene_2552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATACATCTTAA	9092	False	NA	NA	False	NA	NA	NA	54853994	54853811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_54853800_54854000
Isoform_3482_41	chr10	-	3639	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	150	7	6	-4	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTATTTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	80873110	80864378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
Isoform_34820_15	chr12	-	227	1	Intergenic	novelGene_2553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGGGACCCCATCTG	5568	False	NA	NA	False	NA	NA	NA	54861633	54861406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_54861400_54861600
Isoform_34825_3	chr12	+	175	1	Intergenic	novelGene_2554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54920793	54920968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54920800_54921000
Isoform_34826_4	chr12	+	158	1	Intergenic	novelGene_2555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATTAATTAATT	NA	False	NA	NA	False	NA	NA	NA	54925038	54925196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54925000_54925200
Isoform_34827_17	chr12	-	193	1	Intergenic	novelGene_2556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGCTTGTAAATGTTGT	8597	False	NA	NA	False	NA	NA	NA	54929084	54928891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_54928900_54929100
Isoform_34828_9	chr12	+	204	1	Intergenic	novelGene_2557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTTTGTTTGGAGC	NA	False	NA	NA	False	NA	NA	NA	54935262	54935466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54935300_54935500
Isoform_34829_21	chr12	+	216	1	Intergenic	novelGene_2558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAATACATTTAGTCC	NA	False	NA	NA	False	NA	NA	NA	54984673	54984889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_54984700_54984900
Isoform_34831_6	chr12	+	176	1	Intergenic	novelGene_2559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAGAATTAAGG	NA	False	NA	NA	False	NA	NA	NA	55026509	55026685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_55026500_55026700
Isoform_34833_180	chr12	-	176	1	Intergenic	novelGene_2560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	55088789	55088613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_55088600_55088800
Isoform_34834_38	chr12	+	179	1	Intergenic	novelGene_2561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGTACTATT	NA	False	NA	NA	False	NA	NA	NA	55111450	55111629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_55111400_55111600
Isoform_34835_15	chr12	-	728	1	FSM	ENSMUSG00000113137.2	ENSMUST00000220953.2	450	1	-34	-244	-34	244	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTTCTTCAA	NA	False	NA	NA	False	ATTAAA	-17	NA	55115020	55114292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55114300_55115000
Isoform_34838_4	chr1	+	203	1	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGATTGAGGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	86210417	86210620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_86210400_86210600
Isoform_34839_13	chr12	+	186	1	Intergenic	novelGene_2403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTGAAATGAACTACCC	2743	False	NA	NA	False	NA	NA	NA	4604719	4604905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4604700_4604900
Isoform_34841_194	chr12	-	154	1	Intergenic	novelGene_2404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATTAAGGA	NA	False	NA	NA	False	NA	NA	NA	4615553	4615399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_4615400_4615600
Isoform_34845_101	chr12	-	177	1	Intergenic	novelGene_2562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAAGAATCT	8296	False	NA	NA	False	NA	NA	NA	55458072	55457895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_55457900_55458100
Isoform_34846_12	chr12	-	251	1	Genic_Genomic	ENSMUSG00000112505.2	novel	NA	NA	NA	NA	4185	80	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGTTTTAAAACAAGTGA	NA	False	NA	NA	False	NA	NA	NA	4622571	4622320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_4622300_4622600
Isoform_34849_22	chr12	+	212	1	Intergenic	novelGene_2405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGGTTTATACCACAG	204	False	NA	NA	False	AGTAAA	-14	NA	4630116	4630328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4630100_4630300
Isoform_3485_15	chr10	-	3646	4	FSM	ENSMUSG00000046822.15	ENSMUST00000059551.7	3680	4	29	5	3	-4	multi-exon	FALSE	canonical	3	7	junction_3	25.0377492776186	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTATTTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	80873113	80864378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80867535_80869445_80869768_80870751_80870844_80873037
Isoform_34850_5	chr12	-	3117	1	Intergenic	novelGene_2563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTGTCTATGTCGTT	NA	False	NA	NA	False	NA	NA	NA	55601765	55598648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_55598600_55601800
Isoform_34852_29	chr7	-	159	1	Intergenic	novelGene_10332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	122566983	122566824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_122566800_122567000
Isoform_34853_5	chr12	-	176	1	Intergenic	novelGene_2406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAACAAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	4632032	4631856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_4631900_4632000
Isoform_34854_10	chr12	+	178	1	Intergenic	novelGene_2564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	55820197	55820375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_55820200_55820400
Isoform_34855_55	chr12	+	178	1	Intergenic	novelGene_2565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTTTTTTTCACTT	4955	False	NA	NA	False	NA	NA	NA	55841341	55841519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_55841300_55841500
Isoform_34856_4	chr12	-	2767	1	FSM	ENSMUSG00002076190.1	ENSMUST00020183529.1	91	1	53	-2729	53	2729	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	55867885	55865118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_55865100_55867900
Isoform_34859_48	chr12	-	174	1	Intergenic	novelGene_2407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	4633693	4633519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_4633500_4633700
Isoform_3486_13	chr10	-	1439	4	FSM	ENSMUSG00000046822.15	ENSMUST00000059551.7	3680	4	-14	2255	-14	-2254	multi-exon	FALSE	canonical	3	7	junction_3	25.0377492776186	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTGGCCATGTCA	NA	False	NA	-3	True	TTTAAA	-23	NA	80873156	80866628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80867535_80869445_80869768_80870751_80870844_80873037
Isoform_34871_7	chr12	+	153	1	Intergenic	novelGene_2566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	58976580	58976733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_58976600_58976700
Isoform_34872_23	chr12	-	169	1	Intergenic	novelGene_2567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAACCCATTC	NA	False	NA	NA	False	NA	NA	NA	58983851	58983682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_58983700_58983900
Isoform_34875_3	chr12	-	4073	2	Antisense	novelGene_ENSMUSG00000060121.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTGA	2845	False	NA	NA	False	AATAAA	-29	NA	59068801	59064700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_59066013_59066040
Isoform_34876_93	chr12	+	176	1	Intergenic	novelGene_2568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	101	False	NA	NA	False	NA	NA	NA	59070355	59070531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_59070400_59070500
Isoform_34877_31	chr12	+	173	1	Intergenic	novelGene_2569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAATACATAAATA	5113	False	NA	NA	False	NA	NA	NA	59077390	59077563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_59077400_59077600
Isoform_34878_241	chr12	-	173	1	Intergenic	novelGene_2570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTTAAAAAAAAGAGCAC	8391	False	NA	-11	True	NA	NA	NA	59086183	59086010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_59086000_59086200
Isoform_34879_6	chr12	+	1660	1	Antisense	novelGene_ENSMUSG00000020993.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59091250	59092910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_59091200_59092900
Isoform_34880_8	chr12	+	175	1	Intergenic	novelGene_2571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATACTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	59094512	59094687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_59094500_59094700
Isoform_34881_18	chr12	-	184	1	Intergenic	novelGene_2572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGTAAAAG	NA	False	NA	NA	False	NA	NA	NA	59105199	59105015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_59105000_59105200
Isoform_34888_3	chr12	+	205	1	Intergenic	novelGene_2573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGAAATATTTCTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	59125568	59125773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_59125600_59125800
Isoform_34890_31	chr12	-	179	1	Intergenic	novelGene_2574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	59145940	59145761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_59145800_59145900
Isoform_34891_8	chr12	-	189	1	Intergenic	novelGene_2575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59147573	59147384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_59147400_59147600
Isoform_34892_3	chr12	+	209	1	Intergenic	novelGene_2576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATCTTAAAAAAAAGAAA	2191	False	NA	NA	False	NA	NA	NA	59160479	59160688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_59160500_59160700
Isoform_34894_15	chr12	-	180	1	Intergenic	novelGene_2577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACAGAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	59310876	59310696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_59310700_59310900
Isoform_34898_3	chr12	+	238	1	Intergenic	novelGene_2578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTCCTTCTTTTCAG	NA	False	NA	NA	False	AATAAA	-12	NA	62245700	62245938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_62245700_62245900
Isoform_34902_3	chr12	+	759	1	FSM	ENSMUSG00000091905.4	ENSMUST00000167639.4	691	1	616	-684	616	684	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCATGAGTGGGGTCTG	NA	False	NA	22	True	AATAAA	-21	NA	64833700	64834459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_64833700_64834500
Isoform_34909_5	chr12	-	1883	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	0	-860	0	860	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATACAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-35	NA	66331175	66329292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_66329300_66331200
Isoform_34910_5	chr12	-	1894	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	-11	-860	-11	860	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATACAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-35	NA	66331186	66329292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_66329300_66331200
Isoform_34911_261	chr12	-	1022	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTAGCTTTGGTTGTTTT	NA	False	NA	-5	True	ATTAAA	-19	NA	66331175	66330153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_66330200_66331200
Isoform_34917_7	chr12	+	220	1	Intergenic	novelGene_2579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTTTTTAATATTTAT	NA	False	NA	NA	False	NA	NA	NA	66818563	66818783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_66818600_66818800
Isoform_34918_4	chr12	-	180	1	Intergenic	novelGene_2580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAATTTAAATT	NA	False	NA	NA	False	NA	NA	NA	66842442	66842262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_66842300_66842400
Isoform_34919_13	chr7	+	564	1	FSM	ENSMUSG00000066543.9	ENSMUST00000119541.2	555	1	-35	26	-35	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAACTCATGGCCCGG	NA	False	NA	NA	False	AAAAAG	-23	NA	35817663	35818227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_35817700_35818200
Isoform_34925_5	chr12	+	223	1	FSM	ENSMUSG00000113948.2	ENSMUST00000221295.2	556	1	405	-72	405	72	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATATATTTCAATAAT	NA	False	NA	NA	False	NA	NA	NA	67557934	67558157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_67557900_67558200
Isoform_34928_81	chr12	-	175	1	Intergenic	novelGene_2581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCTAG	NA	False	NA	NA	False	NA	NA	NA	68200911	68200736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_68200700_68200900
Isoform_34930_41	chr12	+	5329	1	Intergenic	novelGene_2582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	68604944	68610273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_68604900_68610300
Isoform_34931_219	chr12	+	5301	1	Intergenic	novelGene_2583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68604971	68610272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_68605000_68610300
Isoform_34936_923	chr12	+	5232	1	Intergenic	novelGene_2584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	923	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605040	68610272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_68605000_68610300
Isoform_34944_11	chr13	-	2217	1	Intergenic	novelGene_2906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGTAAAGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	8817077	8814860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_8814900_8817100
Isoform_34956_4	chr12	-	1919	1	Intergenic	novelGene_2586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAACACTTTACCA	NA	False	NA	NA	False	NA	NA	NA	68607904	68605985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_68606000_68607900
Isoform_3498_178	chr10	-	2140	12	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	5	3	combination_of_known_junctions	TRUE	canonical	3	99	junction_11	260.894741448927	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTCCTGTGTCAG	4811	False	NA	-8	True	AATAAA	-20	NA	80895973	80879905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895751
Isoform_34989_6	chr12	+	173	1	Intergenic	novelGene_2408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACACACACACAGATG	9459	False	NA	NA	False	NA	NA	NA	4791604	4791777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4791600_4791800
Isoform_3499_1530	chr10	-	1963	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	6	-5	6	3	multi-exon	FALSE	canonical	3	688	junction_11	105.465203223192	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTCCTGTGTCAG	4778	False	NA	-8	True	AATAAA	-20	NA	80896006	80879905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
Isoform_34990_12	chr12	+	175	1	Intergenic	novelGene_2587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGGAAAGGAAAGGA	357	False	NA	NA	False	NA	NA	NA	69123337	69123512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_69123300_69123500
Isoform_34993_4	chr12	-	329	1	Intergenic	novelGene_2588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCCAAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	69185666	69185337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_69185300_69185700
Isoform_34998_108	chr12	+	174	1	Intergenic	novelGene_2589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAAGTTTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	69207684	69207858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_69207700_69207900
Isoform_34999_74	chr12	-	176	1	Intergenic	novelGene_2590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	69214074	69213898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_69213900_69214100
Isoform_3500_429	chr10	-	1987	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	-19	-4	-16	2	multi-exon	FALSE	canonical	3	688	junction_11	105.465203223192	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGCTTCCTGTGTCA	4753	False	NA	-9	True	AATAAA	-19	NA	80896031	80879906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
Isoform_35007_546	chr12	+	2509	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	36	69	36	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	546	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTCCCTAATCATTTT	2330	False	NA	70	True	AATAAA	-16	NA	69230966	69233475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69231000_69233500
Isoform_35008_72	chr12	+	2577	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	36	1	36	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGCATCACATCTTAATA	2330	False	NA	NA	False	AATAAA	-22	NA	69230966	69233543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_69231000_69233500
Isoform_35021_3	chr12	+	189	1	FSM	ENSMUSG00000091269.3	ENSMUST00000169666.3	1346	1	1283	-126	1283	126	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTGGATATCCTGTT	NA	False	NA	NA	False	NA	NA	NA	4833452	4833641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_4833500_4833600
Isoform_35022_5	chr12	-	175	1	Intergenic	novelGene_2591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTAAAGTTACAGG	423	False	NA	NA	False	NA	NA	NA	69241558	69241383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_69241400_69241600
Isoform_35025_43	chr12	+	176	1	Intergenic	novelGene_2592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCTAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	69273480	69273656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_69273500_69273700
Isoform_35026_8	chr12	-	216	1	Intergenic	novelGene_2594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTGTGAAGAGACGCC	NA	False	NA	NA	False	NA	NA	NA	69332800	69332584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_69332600_69332800
Isoform_35027_52	chr12	+	173	1	Intergenic	novelGene_2595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	69349603	69349776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_69349600_69349800
Isoform_3504_51	chr10	-	2145	12	NIC	ENSMUSG00000004937.7	novel	1969	12	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	3	99	junction_11	332.810024483479	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4810	False	NA	-7	True	AATAAA	-21	NA	80895974	80879904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895751
Isoform_35043_6	chr12	-	170	1	Intergenic	novelGene_2596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTAAATCCC	NA	False	NA	NA	False	NA	NA	NA	69619974	69619804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_69619800_69620000
Isoform_35044_3	chr12	+	3892	1	Antisense	novelGene_ENSMUSG00000034801.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTAAAGTTATTTTAAGA	NA	False	NA	NA	False	AATATA	-41	NA	69639735	69643627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_69639700_69643600
Isoform_35046_81	chr12	+	177	1	Intergenic	novelGene_2597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	69710596	69710773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_69710600_69710800
Isoform_3505_431	chr10	-	1958	12	FSM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	14	-3	14	3	multi-exon	FALSE	canonical	3	182	junction_9	245.943486083912	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTCCTGTGTCAG	4786	False	NA	-8	True	AATAAA	-20	NA	80895998	80879905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895961
Isoform_35053_7	chr12	+	1471	1	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	3	-11521	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACCAAGCTACACAAGT	NA	False	NA	NA	False	NA	NA	NA	69771766	69773237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_69771800_69773200
Isoform_35054_34	chr12	-	177	1	Intergenic	novelGene_2598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAGAGGGTTT	NA	False	NA	NA	False	NA	NA	NA	69779800	69779623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_69779600_69779800
Isoform_35056_6	chr12	+	222	1	Intergenic	novelGene_2599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACAATTTTTATTTATT	1143	False	NA	NA	False	NA	NA	NA	69844825	69845047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_69844800_69845000
Isoform_35058_6	chr12	-	362	1	Intergenic	novelGene_2409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGAGAGAGA	9426	False	NA	NA	False	NA	NA	NA	4898320	4897958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_4898000_4898300
Isoform_35060_32	chr12	+	212	1	Intergenic	novelGene_2600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGATCAGAGGATA	NA	False	NA	NA	False	AATAAA	-6	NA	69978028	69978240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_69978000_69978200
Isoform_35061_11	chr12	-	181	1	Intergenic	novelGene_2601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGTTCTATACAGAAAA	NA	False	NA	NA	False	NA	NA	NA	69991455	69991274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_69991300_69991500
Isoform_35062_6	chr12	+	178	1	Intergenic	novelGene_2602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAATGTGGAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	70266749	70266927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_70266700_70266900
Isoform_35065_7	chr12	-	247	1	Intergenic	novelGene_2603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACACTCTTTATAGCTTC	NA	False	NA	NA	False	NA	NA	NA	70834252	70834005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_70834000_70834300
Isoform_35067_4	chr12	-	2242	1	Intergenic	novelGene_2604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70901950	70899708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_70899700_70902000
Isoform_35068_4	chr12	+	158	1	Intergenic	novelGene_2605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	70951794	70951952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_70951800_70952000
Isoform_35069_67	chr12	+	169	1	ISM	ENSMUSG00000113707.2	ENSMUST00000222619.2	1906	2	2052	6	2052	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAAAGAAAGAAACC	NA	False	NA	NA	False	NA	NA	NA	70961084	70961253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_70961100_70961300
Isoform_35070_29	chr12	+	178	1	Intergenic	novelGene_2606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGTAGGTTGCAA	2262	False	NA	NA	False	NA	NA	NA	70977247	70977425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_70977200_70977400
Isoform_35071_44	chr12	-	161	1	Intergenic	novelGene_2607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTACTACCCTTTATT	5405	False	NA	NA	False	NA	NA	NA	71003852	71003691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_71003700_71003900
Isoform_35072_9	chr12	-	233	1	Antisense	novelGene_ENSMUSG00000021076.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCGTAGGAATGTAGAGGT	5798	False	NA	NA	False	NA	NA	NA	71009789	71009556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_71009600_71009800
Isoform_35074_20	chr12	-	160	1	Intergenic	novelGene_2410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGATTTATTTTA	9879	False	NA	NA	False	NA	NA	NA	4907131	4906971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_4907000_4907100
Isoform_35076_34	chr12	-	173	1	Intergenic	novelGene_2608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAATTTTTTACTAGA	NA	False	NA	NA	False	AAAAAG	-17	NA	71045651	71045478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_71045500_71045700
Isoform_35077_5	chr12	+	218	1	Intergenic	novelGene_2609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGTAAGGCCGGGGC	1839	False	NA	NA	False	NA	NA	NA	71050234	71050452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_71050200_71050500
Isoform_35078_115	chr12	+	182	1	Intergenic	novelGene_2610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	2073	False	NA	NA	False	NA	NA	NA	71050468	71050650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_71050500_71050600
Isoform_35081_10	chr12	+	2822	2	Antisense	novelGene_ENSMUSG00000085622.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4796	False	NA	NA	False	AAAAAG	-44	NA	71053191	71056033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_71053314_71053333
Isoform_35082_9	chr12	-	1798	1	FSM	ENSMUSG00000085622.10	ENSMUST00000222159.2	1790	1	8	-16	8	16	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	71062361	71060563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_71060600_71062400
Isoform_35083_140	chr12	+	203	1	ISM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	15773	765	8930	-765	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCTGAAAGTTTTACAAA	1258	False	NA	NA	False	NA	NA	NA	4909075	4909278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_4909100_4909300
Isoform_35084_62	chr4	+	216	1	Intergenic	novelGene_8284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTGTAGATCTGCAG	NA	False	NA	NA	False	NA	NA	NA	152525775	152525991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_152525800_152526000
Isoform_35085_15	chr8	-	176	1	Intergenic	novelGene_10602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34532037	34531861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_34531900_34532000
Isoform_35087_136	chr12	+	175	1	Intergenic	novelGene_2612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	71122922	71123097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_71122900_71123100
Isoform_35090_14	chr12	+	186	1	Intergenic	novelGene_2613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTTTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	71149338	71149524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_71149300_71149500
Isoform_35091_15	chr12	-	171	1	Intergenic	novelGene_2614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAGAAACAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	71161905	71161734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_71161700_71161900
Isoform_35093_8	chr12	-	1098	1	FSM	ENSMUSG00000021079.17	ENSMUST00000223544.2	1098	1	-44	44	-4	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAAAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	71183453	71182355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_71182400_71183500
Isoform_35095_16	chr12	-	174	1	Intergenic	novelGene_2615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71186399	71186225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_71186200_71186400
Isoform_35096_9	chr12	-	2930	1	Antisense	novelGene_ENSMUSG00000034601.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71189153	71186223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_71186200_71189200
Isoform_35098_34	chr12	+	176	1	Intergenic	novelGene_2616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71230282	71230458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_71230300_71230500
Isoform_35099_5	chr12	-	1805	1	Intergenic	novelGene_2617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAGCTAAATTGAGTA	NA	False	NA	NA	False	NA	NA	NA	71233704	71231899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_71231900_71233700
Isoform_35102_6	chr12	+	3862	1	Antisense	novelGene_ENSMUSG00000020634.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4932374	4936236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_4932400_4936200
Isoform_35105_5	chr12	-	176	1	Intergenic	novelGene_2618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71491740	71491564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_71491600_71491700
Isoform_35106_14	chr12	-	178	1	Intergenic	novelGene_2619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTTAGATAGC	NA	False	NA	NA	False	NA	NA	NA	71845753	71845575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_71845600_71845800
Isoform_35107_258	chr12	+	169	1	Intergenic	novelGene_2620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	71845800	71845969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_71845800_71846000
Isoform_35108_35	chr12	+	179	1	Intergenic	novelGene_2621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCCTTATTTTAATCT	NA	False	NA	2	True	NA	NA	NA	71861862	71862041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_71861900_71862000
Isoform_35110_5	chr12	+	181	1	Intergenic	novelGene_2622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATCCCTTAGTGAA	NA	False	NA	NA	False	NA	NA	NA	72104781	72104962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_72104800_72105000
Isoform_35111_7	chr12	-	3144	1	FSM	ENSMUSG00000043398.6	ENSMUST00000050649.6	3150	1	3	3	3	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCAAAGATGTTTTGTTT	NA	False	NA	-8	True	AATACA	-16	NA	72117896	72114752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_72114800_72117900
Isoform_35112_36	chr12	-	904	1	NIC	ENSMUSG00000019718.9	novel	1831	5	NA	NA	24	-7248	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACGCTTCAGTGTCTTTG	NA	False	NA	-2	True	AATAAA	-23	NA	72132189	72131285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_72131300_72132200
Isoform_35116_17	chr12	-	174	1	Intergenic	novelGene_2623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGAATCTTTGAAAG	NA	False	NA	NA	False	NA	NA	NA	72578681	72578507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_72578500_72578700
Isoform_35123_3	chr12	-	190	1	Intergenic	novelGene_2625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGAGTGGAAACTTG	NA	False	NA	NA	False	NA	NA	NA	72762599	72762409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_72762400_72762600
Isoform_35124_110	chr12	-	197	1	Intergenic	novelGene_2626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGGGAACTGAATGATCA	NA	False	NA	NA	False	NA	NA	NA	72773794	72773597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_72773600_72773800
Isoform_35129_53	chr12	+	172	1	Intergenic	novelGene_2627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATTTTGATGTAGG	NA	False	NA	NA	False	NA	NA	NA	72982119	72982291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_72982100_72982300
Isoform_35130_5	chr12	-	195	1	Intergenic	novelGene_2628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTGTGTACATGTG	5737	False	NA	NA	False	NA	NA	NA	73041150	73040955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_73041000_73041200
Isoform_35131_15	chr12	+	178	1	Intergenic	novelGene_2629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAGAAGAAATG	3124	False	NA	NA	False	NA	NA	NA	73047656	73047834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_73047700_73047800
Isoform_35134_20	chr12	+	213	1	Intergenic	novelGene_2630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTTAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	73072844	73073057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_73072800_73073100
Isoform_35136_3	chr12	-	1445	2	Intergenic	novelGene_2411	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAACTATATACAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	4967279	4965809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_4966041_4966065
Isoform_35138_12	chr12	+	162	1	Intergenic	novelGene_2631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTCCCCAGCACCGGA	NA	False	NA	NA	False	NA	NA	NA	73143166	73143328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_73143200_73143300
Isoform_35143_3	chr12	+	175	1	Intergenic	novelGene_2632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAGAACACAGTAA	8046	False	NA	NA	False	NA	NA	NA	73220126	73220301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_73220100_73220300
Isoform_35146_5	chr12	-	176	1	Intergenic	novelGene_2633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	73390869	73390693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_73390700_73390900
Isoform_35147_3	chr12	+	908	1	ISM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	66359	4	8771	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTATGCTGGTTTTTT	NA	False	NA	4	True	NA	NA	NA	73399911	73400819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_73399900_73400800
Isoform_35149_11	chr12	-	3156	1	FSM	ENSMUSG00000034435.7	ENSMUST00000042975.7	2991	1	-171	6	-171	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTATCACATTACTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	73593337	73590181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_73590200_73593300
Isoform_35152_6	chr12	-	4390	1	Intergenic	novelGene_2634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCCACGGAACGCGGC	NA	False	NA	NA	False	NA	NA	NA	73959520	73955130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_73955100_73959500
Isoform_35154_3	chr12	+	178	1	Intergenic	novelGene_2412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGTTTAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	4981855	4982033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4981900_4982000
Isoform_35158_173	chr3	+	180	1	Intergenic	novelGene_7375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145679550	145679730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_145679600_145679700
Isoform_3516_5	chr10	-	1979	10	ISM	ENSMUSG00000035041.9	ENSMUST00000117422.2	2294	12	6232	5	-67	-5	3prime_fragment	FALSE	canonical	0	0	junction_1	2.16595429884644	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGCTGCGGCTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	80928476	80920162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925279_80925910_80926018_80926971_80927270_80927631_80927764_80928336
Isoform_35163_153	chr12	-	431	1	FSM	ENSMUSG00000118552.2	ENSMUST00000238938.2	348	1	-30	-53	-30	53	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTGTTCTTTTAAA	NA	False	NA	-27	True	AATAAA	-31	NA	75678122	75677691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_75677700_75678100
Isoform_35164_10	chr12	+	177	1	Intergenic	novelGene_2636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATCTTCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	75688405	75688582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_75688400_75688600
Isoform_35165_3	chr12	-	175	1	Intergenic	novelGene_2637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAATCAGCATT	NA	False	NA	NA	False	NA	NA	NA	75778975	75778800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_75778800_75779000
Isoform_35170_5	chr12	+	163	1	Intergenic	novelGene_2638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	76215039	76215202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76215000_76215200
Isoform_35171_4	chr3	+	183	1	Intergenic	novelGene_7199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95477264	95477447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_95477300_95477400
Isoform_35173_4	chr12	+	6918	1	Intergenic	novelGene_2639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	76269180	76276098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76269200_76276100
Isoform_35174_4	chr12	-	2962	1	Intergenic	novelGene_2640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAGAACGAATGAGCAG	2079	False	NA	NA	False	NA	NA	NA	76272151	76269189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_76269200_76272200
Isoform_35175_81	chr12	+	6788	1	Intergenic	novelGene_2641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	76269310	76276098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76269300_76276100
Isoform_35187_3	chr12	-	1900	1	Intergenic	novelGene_2642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTGTAGCTACAATCA	2053	False	NA	NA	False	NA	NA	NA	76272177	76270277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_76270300_76272200
Isoform_35191_21	chr12	-	175	1	Intergenic	novelGene_2643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATATATATACATA	NA	False	NA	NA	False	NA	NA	NA	76279646	76279471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_76279500_76279600
Isoform_35192_5	chr12	+	182	1	Intergenic	novelGene_2644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76283111	76283293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76283100_76283300
Isoform_35194_7	chr12	-	177	1	Intergenic	novelGene_2645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	76406563	76406386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_76406400_76406600
Isoform_35198_36	chr12	+	2523	1	FSM	ENSMUSG00000059970.8	ENSMUST00000219555.2	2526	1	4	-1	4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTGTCTGGCGTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	76451186	76453709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_76451200_76453700
Isoform_35199_7	chr12	+	182	1	Intergenic	novelGene_2646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCTTGCACAT	NA	False	NA	NA	False	NA	NA	NA	76456808	76456990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76456800_76457000
Isoform_35200_174	chr12	+	176	1	Intergenic	novelGene_2647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTT	1357	False	NA	NA	False	NA	NA	NA	76499334	76499510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76499300_76499500
Isoform_35204_28	chr12	+	172	1	Intergenic	novelGene_2648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAAGAAGAAGGAG	4835	False	NA	NA	False	NA	NA	NA	76551917	76552089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76551900_76552100
Isoform_35205_8	chr12	+	179	1	Intergenic	novelGene_2649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTGTCCTTA	NA	False	NA	NA	False	NA	NA	NA	76560610	76560789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76560600_76560800
Isoform_35206_3	chr12	+	174	1	Intergenic	novelGene_2650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGGATATG	NA	False	NA	NA	False	NA	NA	NA	76589679	76589853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76589700_76589900
Isoform_35207_3	chr12	-	178	1	Intergenic	novelGene_2651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAATTTCACTTT	NA	False	NA	NA	False	NA	NA	NA	76621471	76621293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_76621300_76621500
Isoform_35212_13	chr12	+	175	1	Intergenic	novelGene_2652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAATATA	NA	False	NA	NA	False	NA	NA	NA	76824276	76824451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76824300_76824500
Isoform_35214_8	chr12	+	189	1	Intergenic	novelGene_2653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAACATTTACAGCTT	NA	False	NA	NA	False	NA	NA	NA	76874790	76874979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_76874800_76875000
Isoform_35215_29	chr12	-	176	1	Intergenic	novelGene_2654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGATTAAAATATT	NA	False	NA	NA	False	NA	NA	NA	76877728	76877552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_76877600_76877700
Isoform_35217_3	chr12	-	3762	1	Intergenic	novelGene_2655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	9031	False	NA	NA	False	NA	NA	NA	76928807	76925045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_76925000_76928800
Isoform_35218_11	chr12	-	173	1	Intergenic	novelGene_2656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATAAAATAAAAT	7317	False	NA	NA	False	NA	NA	NA	76932769	76932596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_76932600_76932800
Isoform_35228_12	chr12	+	159	1	Intergenic	novelGene_2657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAATAAATA	8451	False	NA	NA	False	NA	NA	NA	77186198	77186357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_77186200_77186400
Isoform_35229_6	chr12	+	184	1	Intergenic	novelGene_2658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATAAAAGTCCTCCT	7792	False	NA	NA	False	NA	NA	NA	77197196	77197380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_77197200_77197400
Isoform_35230_3	chr12	-	185	1	Intergenic	novelGene_2659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77351133	77350948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_77350900_77351100
Isoform_35231_5	chr12	-	1447	1	FSM	ENSMUSG00000112302.2	ENSMUST00000219034.2	4240	1	-41	2834	-41	-2834	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTTCAAGTCTATTAT	NA	False	NA	NA	False	AATAAA	-18	NA	78273340	78271893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_78271900_78273300
Isoform_35234_26	chr12	+	167	1	Intergenic	novelGene_2660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAAGAAACTA	NA	False	NA	NA	False	NA	NA	NA	78603107	78603274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_78603100_78603300
Isoform_35238_10	chr12	+	203	1	Intergenic	novelGene_2661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCATGATTTCATAAGAA	NA	False	NA	NA	False	NA	NA	NA	78877021	78877224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_78877000_78877200
Isoform_3524_983	chr10	-	2381	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	188	2	-21	-2	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTGTGGTTTCTCTGT	NA	False	NA	0	True	AATAAA	-35	NA	81003569	80989101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
Isoform_35244_4	chr12	-	3294	3	NNC	ENSMUSG00000046157.14	novel	3621	3	NA	NA	2832	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCTGTGACCCATCTG	NA	False	NA	-3	True	CATAAA	-24	NA	79024705	79008570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr12_-_79010790_79011043_79011948_79024534
Isoform_35246_3	chr12	+	2800	1	NIC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	42	-18302	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACCACAAAACAAA	6167	False	NA	NA	False	NA	NA	NA	79075978	79078778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_79076000_79078800
Isoform_35248_11	chr12	-	180	1	Intergenic	novelGene_2413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAATGAGGC	NA	False	NA	NA	False	NA	NA	NA	6998623	6998443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_6998400_6998600
Isoform_35250_4	chr12	+	177	1	Intergenic	novelGene_2662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGCACTGAAAA	NA	False	NA	NA	False	NA	NA	NA	79322223	79322400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_79322200_79322400
Isoform_35251_13	chr12	+	2402	1	Antisense	novelGene_ENSMUSG00000066440.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6343	False	NA	NA	False	NA	NA	NA	79333587	79335989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_79333600_79336000
Isoform_35254_8	chr12	-	172	1	Intergenic	novelGene_2663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAAAGCCCGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	79547869	79547697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_79547700_79547900
Isoform_35255_4	chr12	-	4266	1	Intergenic	novelGene_2664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGGAGTGCTCTTACA	NA	False	NA	NA	False	NA	NA	NA	79577301	79573035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_79573000_79577300
Isoform_35264_3	chr3	-	175	1	Intergenic	novelGene_7292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	8597	False	NA	NA	False	NA	NA	NA	116586276	116586101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_116586100_116586300
Isoform_35271_4	chr12	+	199	1	Intergenic	novelGene_2666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGATTCAGTACTGATC	NA	False	NA	NA	False	NA	NA	NA	80311818	80312017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_80311800_80312000
Isoform_35273_8	chr12	-	175	1	Intergenic	novelGene_2667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAACAAAACAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	80375125	80374950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80375000_80375100
Isoform_35274_14	chr12	-	176	1	Intergenic	novelGene_2668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGT	NA	False	NA	NA	False	NA	NA	NA	80419828	80419652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80419700_80419800
Isoform_35276_32	chr12	-	198	1	Intergenic	novelGene_2669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACCTAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80490142	80489944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80489900_80490100
Isoform_35278_25	chr12	-	204	1	Intergenic	novelGene_2670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGATACTGTCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	80503445	80503241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80503200_80503400
Isoform_35279_15	chr12	-	206	1	Intergenic	novelGene_2671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTCATATCCTTTCATA	NA	False	NA	NA	False	NA	NA	NA	80504147	80503941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80503900_80504100
Isoform_3528_112	chr10	-	2403	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	149	19	-60	-19	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTCCGGCATCTGAAC	NA	False	NA	-17	True	AATAAA	-18	NA	81003608	80989118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
Isoform_35281_10	chr12	-	182	1	Intergenic	novelGene_2672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTCTTTTCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	80518021	80517839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80517800_80518000
Isoform_35283_43	chr12	+	177	1	Intergenic	novelGene_2673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80543057	80543234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_80543100_80543200
Isoform_35285_12	chr12	-	177	1	Intergenic	novelGene_2674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATACCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	80563039	80562862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80562900_80563000
Isoform_35286_4	chr12	-	176	1	Intergenic	novelGene_2414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGCTGTTCATAT	NA	False	NA	NA	False	NA	NA	NA	8309196	8309020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_8309000_8309200
Isoform_35288_22	chr12	-	164	1	Intergenic	novelGene_2675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	80679648	80679484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80679500_80679600
Isoform_35298_12	chr12	-	176	1	Intergenic	novelGene_2677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAATACCCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	80826211	80826035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80826000_80826200
Isoform_353_19	SIRV12001	+	12029	1	FSM	SIRV12001A	SIRV12001	12029	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV12001_+_0_12000
Isoform_35301_3	chr12	-	3182	1	Intergenic	novelGene_2678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	9525	False	NA	NA	False	NA	NA	NA	80914892	80911710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80911700_80914900
Isoform_35305_114	chr12	-	179	1	Intergenic	novelGene_2679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTCACATTACAG	4401	False	NA	NA	False	NA	NA	NA	80964392	80964213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80964200_80964400
Isoform_35306_3	chr12	-	382	1	Intergenic	novelGene_2680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATGATTGAA	NA	False	NA	NA	False	NA	NA	NA	80972492	80972110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80972100_80972500
Isoform_35308_14	chr12	-	176	1	Intergenic	novelGene_2681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAATAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	80977690	80977514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_80977500_80977700
Isoform_35309_30	chr12	+	1313	1	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	3	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80992310	80993623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_80992300_80993600
Isoform_35316_78	chr12	-	185	1	Intergenic	novelGene_2682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAAGATTTGC	NA	False	NA	NA	False	NA	NA	NA	81016659	81016474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_81016500_81016700
Isoform_35321_5	chr12	-	2553	1	Intergenic	novelGene_2683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCGTGGTTTTGCTTAG	NA	False	NA	NA	False	NA	NA	NA	81091966	81089413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_81089400_81092000
Isoform_35323_3	chr12	-	1759	1	NIC	ENSMUSG00000071456.7	novel	3569	3	NA	NA	1	-17731	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAGAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	3476713	3474954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_3475000_3476700
Isoform_35327_213	chr5	+	173	1	Intergenic	novelGene_8771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	3788	False	NA	NA	False	NA	NA	NA	113949313	113949486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_113949300_113949500
Isoform_35328_13	chr12	+	168	1	Intergenic	novelGene_2685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATAATTAGCT	NA	False	NA	NA	False	NA	NA	NA	81588841	81589009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_81588800_81589000
Isoform_35331_4	chr12	-	837	1	Antisense	novelGene_ENSMUSG00000042734.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGTCTACTTTGCAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	81710774	81709937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_81709900_81710800
Isoform_35332_12	chr12	-	194	1	Intergenic	novelGene_2687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	81747740	81747546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_81747500_81747700
Isoform_35333_16	chr12	+	1161	1	Intergenic	novelGene_2688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81810744	81811905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_81810700_81811900
Isoform_35334_6	chr12	-	189	1	Intergenic	novelGene_2689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGTTCCAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	81835219	81835030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_81835000_81835200
Isoform_35335_284	chr12	-	2345	1	FSM	ENSMUSG00000054364.6	ENSMUST00000067384.6	2349	1	-2	6	-2	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAGCTCCTGTGGCTTA	NA	False	NA	81	True	ATTAAA	-22	NA	8550011	8547666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_8547700_8550000
Isoform_35340_316	chr12	-	2265	1	FSM	ENSMUSG00000054364.6	ENSMUST00000067384.6	2349	1	-2	86	-2	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTTTACATAAGAGTTC	NA	False	NA	1	True	AATAAA	-27	NA	8550011	8547746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_8547700_8550000
Isoform_35345_9	chr12	+	176	1	Intergenic	novelGene_2690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	81877432	81877608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_81877400_81877600
Isoform_35347_13	chr12	-	171	1	Intergenic	novelGene_2691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCTAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	81926332	81926161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_81926200_81926300
Isoform_35350_17	chr12	+	167	1	Intergenic	novelGene_2692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAATAATA	NA	False	NA	NA	False	NA	NA	NA	82466661	82466828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_82466700_82466800
Isoform_35353_6	chr12	+	178	1	Intergenic	novelGene_2693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAAATT	4507	False	NA	NA	False	NA	NA	NA	83525070	83525248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_83525100_83525200
Isoform_35354_14	chr12	+	161	1	Intergenic	novelGene_2694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGTCCTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83558526	83558687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_83558500_83558700
Isoform_35359_8	chr12	-	190	1	Intergenic	novelGene_2695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTCTTTCTTTCT	387	False	NA	NA	False	NA	NA	NA	83620789	83620599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83620600_83620800
Isoform_35360_22	chr12	+	178	1	Intergenic	novelGene_2696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAG	1110	False	NA	NA	False	NA	NA	NA	83633696	83633874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_83633700_83633900
Isoform_35361_13	chr12	+	177	1	Intergenic	novelGene_2697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	4429	False	NA	NA	False	NA	NA	NA	83637015	83637192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_83637000_83637200
Isoform_35362_22	chr12	-	186	1	Intergenic	novelGene_2698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAGGAGAGTACTGAC	NA	False	NA	NA	False	NA	NA	NA	83649897	83649711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83649700_83649900
Isoform_35363_18	chr12	+	171	1	Intergenic	novelGene_2699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAATATCTGA	1093	False	NA	NA	False	NA	NA	NA	83652399	83652570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_83652400_83652600
Isoform_35364_36	chr12	-	159	1	Intergenic	novelGene_2700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATTTAA	5507	False	NA	NA	False	NA	NA	NA	83662984	83662825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83662800_83663000
Isoform_35365_3	chr12	-	180	1	Intergenic	novelGene_2701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATTGTCAAT	90	False	NA	NA	False	NA	NA	NA	83668401	83668221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83668200_83668400
Isoform_35367_30	chr12	+	280	1	Intergenic	novelGene_2415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	8688973	8689253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_8689000_8689300
Isoform_35369_18	chr12	-	2753	1	Antisense	novelGene_ENSMUSG00000010608.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83691028	83688275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_83688300_83691000
Isoform_35371_16	chr12	-	175	1	Intergenic	novelGene_2702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83694136	83693961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83694000_83694100
Isoform_35372_4	chr12	-	2206	1	Intergenic	novelGene_2703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCAATAGATAAGCTGC	NA	False	NA	NA	False	NA	NA	NA	83704754	83702548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83702500_83704800
Isoform_35376_16	chr12	-	1911	1	Intergenic	novelGene_2704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCGATGTGTCTGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	83732070	83730159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83730200_83732100
Isoform_35377_17	chr12	-	175	1	Intergenic	novelGene_2705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTCACCGACACA	NA	False	NA	NA	False	NA	NA	NA	83748375	83748200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83748200_83748400
Isoform_35378_68	chr12	+	173	1	Intergenic	novelGene_2706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGGTATTTTTATG	NA	False	NA	NA	False	NA	NA	NA	83760341	83760514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_83760300_83760500
Isoform_35379_14	chr12	-	172	1	Intergenic	novelGene_2707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATGCAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	83780321	83780149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83780100_83780300
Isoform_35380_132	chr12	-	188	1	Intergenic	novelGene_2708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	7341	False	NA	NA	False	NA	NA	NA	83812603	83812415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83812400_83812600
Isoform_35383_5	chr12	+	4144	1	Antisense	novelGene_ENSMUSG00000021224.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAACCAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	83901736	83905880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_83901700_83905900
Isoform_35384_4	chr12	-	198	1	Intergenic	novelGene_2709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCCATGTCTATAATTC	7026	False	NA	NA	False	NA	NA	NA	83914879	83914681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83914700_83914900
Isoform_35386_11	chr12	-	176	1	Intergenic	novelGene_2710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGTAA	655	False	NA	NA	False	NA	NA	NA	83984197	83984021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_83984000_83984200
Isoform_35387_416	chr12	+	2298	1	FSM	ENSMUSG00000046791.9	ENSMUST00000053744.9	2344	1	46	0	46	0	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTCTAAGCCTAG	4021	False	NA	17	True	ATTAAA	-21	NA	83997427	83999725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_83997400_83999700
Isoform_35392_408	chr2	+	174	1	Intergenic	novelGene_6051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	26783280	26783454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_26783300_26783500
Isoform_35393_4	chr12	-	590	2	Antisense	novelGene_ENSMUSG00000021226.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84040647	84040019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_84040424_84040461
Isoform_35394_21	chr12	-	173	1	Intergenic	novelGene_2711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAACAAAACT	NA	False	NA	NA	False	NA	NA	NA	84044817	84044644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84044600_84044800
Isoform_35396_4	chr12	-	215	1	Intergenic	novelGene_2417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCCAGGCAGTGGAGGC	NA	False	NA	NA	False	NA	NA	NA	8718633	8718418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_8718400_8718600
Isoform_35402_3	chr12	+	184	1	Intergenic	novelGene_2712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGTAACAAC	7919	False	NA	NA	False	NA	NA	NA	84214892	84215076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_84214900_84215100
Isoform_35403_4	chr12	-	3043	1	Genic_Genomic	ENSMUSG00000042507.16	novel	NA	NA	NA	NA	-96	-34541	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	84240885	84237842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_84237800_84240900
Isoform_35404_4	chr12	-	2975	1	Genic_Genomic	ENSMUSG00000042507.16	novel	NA	NA	NA	NA	-28	-34541	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	84240817	84237842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_84237800_84240800
Isoform_35406_6	chr12	-	4084	1	Intergenic	novelGene_2713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84282473	84278389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84278400_84282500
Isoform_35407_4	chr12	-	3825	1	Intergenic	novelGene_2714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCACTGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	84282509	84278684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84278700_84282500
Isoform_35410_20	chr12	+	188	1	Intergenic	novelGene_2715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAATCACGTTGACATA	NA	False	NA	NA	False	NA	NA	NA	84284583	84284771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_84284600_84284800
Isoform_35411_78	chr12	-	169	1	Intergenic	novelGene_2716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACCCAAAGCAACA	NA	False	NA	NA	False	NA	NA	NA	84294903	84294734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84294700_84294900
Isoform_35412_51	chr12	+	191	1	Intergenic	novelGene_2717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGTGAGAA	2535	False	NA	NA	False	NA	NA	NA	84319659	84319850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_84319700_84319800
Isoform_35413_6	chr12	-	198	1	Intergenic	novelGene_2718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGAGATACTAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	84348448	84348250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84348200_84348400
Isoform_35417_93	chr12	-	174	1	Antisense	novelGene_ENSMUSG00000042472.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	5401	False	NA	NA	False	NA	NA	NA	84377161	84376987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_84377000_84377200
Isoform_35418_4	chr12	-	240	1	Antisense	novelGene_ENSMUSG00000042472.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTATTTCTCAGGAATAA	4700	False	NA	NA	False	NA	NA	NA	84377862	84377622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_84377600_84377900
Isoform_35423_21	chr12	+	1327	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	56	0	56	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCTGGTGTGATCTTTC	NA	False	NA	10	True	AATAAA	-19	NA	84464025	84465352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84464000_84465400
Isoform_35424_156	chr12	+	1291	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	92	0	92	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCTGGTGTGATCTTTC	NA	False	NA	10	True	AATAAA	-19	NA	84464061	84465352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84464100_84465400
Isoform_35428_7	chr12	-	2058	1	NIC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	3	-9214	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACTAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	84497774	84495716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_84495700_84497800
Isoform_35430_3	chr12	-	169	1	Intergenic	novelGene_2720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTGTTGTTAAAGAA	6831	False	NA	NA	False	NA	NA	NA	84546228	84546059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84546100_84546200
Isoform_35431_7	chr12	-	1416	1	Intergenic	novelGene_2418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAACAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-39	NA	8789110	8787694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_8787700_8789100
Isoform_35432_3	chr12	-	5793	1	Intergenic	novelGene_2721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-44	NA	84553122	84547329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84547300_84553100
Isoform_35433_27	chr12	+	177	1	Intergenic	novelGene_2722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAATAATGCATTT	NA	False	NA	NA	False	NA	NA	NA	84556728	84556905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_84556700_84556900
Isoform_35435_27	chr13	-	158	1	Intergenic	novelGene_3090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	55855522	55855364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55855400_55855500
Isoform_35436_32	chr12	+	362	1	Intergenic	novelGene_2723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84586577	84586939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_84586600_84586900
Isoform_35437_10	chr12	-	178	1	Intergenic	novelGene_2724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCCATTCCTTGAA	NA	False	NA	NA	False	NA	NA	NA	84596723	84596545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84596500_84596700
Isoform_35441_15	chr12	+	177	1	Intergenic	novelGene_2419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAACAAAACAAAC	4354	False	NA	NA	False	NA	NA	NA	8796790	8796967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_8796800_8797000
Isoform_35442_12	chr12	+	176	1	Intergenic	novelGene_2725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACCA	NA	False	NA	NA	False	NA	NA	NA	84670152	84670328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_84670200_84670300
Isoform_35443_11	chr12	-	205	1	Intergenic	novelGene_2726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCCCAACAAAATAGTA	5838	False	NA	NA	False	NA	NA	NA	84692956	84692751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84692800_84693000
Isoform_35444_37	chr12	+	177	1	Intergenic	novelGene_2727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	84706789	84706966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_84706800_84707000
Isoform_35445_7	chr12	-	191	1	Intergenic	novelGene_2728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACAAAACAAAACT	9250	False	NA	NA	False	NA	NA	NA	84763839	84763648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_84763600_84763800
Isoform_3545_656	chr10	-	590	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	8	6	-2	-6	multi-exon	FALSE	canonical	3	958	junction_1	11.5	656	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCACATGTGTGTCATGC	3102	False	NA	-6	True	AATAAA	-23	NA	81102760	81100552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81100832_81101484_81101642_81102606
Isoform_35453_18	chr12	+	1809	1	FSM	ENSMUSG00000021241.8	ENSMUST00000222136.2	416	1	0	-1393	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTATCGTGTTTTCA	NA	False	NA	13	True	TATAAA	-16	NA	84820051	84821860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_84820100_84821900
Isoform_35454_3	chr12	+	177	1	Intergenic	novelGene_2729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAAGTTATC	8519	False	NA	NA	False	NA	NA	NA	84979446	84979623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_84979400_84979600
Isoform_35467_13	chr12	+	228	1	Intergenic	novelGene_2730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAATACTATGTTATGT	3861	False	NA	NA	False	NA	NA	NA	85033815	85034043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_85033800_85034000
Isoform_35468_11	chr12	-	226	1	Intergenic	novelGene_2420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGATGAAATATGTATCT	NA	False	NA	NA	False	NA	NA	NA	8818534	8818308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_8818300_8818500
Isoform_35469_12	chr12	-	179	1	Intergenic	novelGene_2731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATAAACTCAT	NA	False	NA	NA	False	NA	NA	NA	85039903	85039724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_85039700_85039900
Isoform_35471_8	chr12	+	182	1	Intergenic	novelGene_2732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAAGTATTGACAA	NA	False	NA	NA	False	NA	NA	NA	85061011	85061193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_85061000_85061200
Isoform_35472_7	chr12	-	175	1	Intergenic	novelGene_2421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	8818935	8818760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_8818800_8818900
Isoform_35477_26	chr12	+	178	1	Intergenic	novelGene_2422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATTTAGAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	8887756	8887934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_8887800_8887900
Isoform_35478_53	chr12	+	170	1	Intergenic	novelGene_2733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATATTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85325384	85325554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_85325400_85325600
Isoform_3548_6	chr10	-	2280	16	ISM	ENSMUSG00000034917.9	ENSMUST00000045744.7	3024	21	10325	-1	-825	1	3prime_fragment	TRUE	canonical	3	101	junction_15	18.2598527437168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATACAAGACTGAGGA	NA	False	NA	9	True	AATAAA	-28	NA	81116776	81109039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599
Isoform_35481_10	chr12	-	547	1	Antisense	novelGene_ENSMUSG00000020585.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8971867	8971320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_8971300_8971900
Isoform_35484_183	chr12	-	160	1	Intergenic	novelGene_2734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGCAATGTAAAGT	NA	False	NA	-1	True	NA	NA	NA	85556675	85556515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_85556500_85556700
Isoform_35486_50	chr12	-	170	1	Intergenic	novelGene_2735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	85605245	85605075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_85605100_85605200
Isoform_35488_7	chr12	-	168	1	Intergenic	novelGene_2736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTAAATTAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717445	85717277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_85717300_85717400
Isoform_35489_3	chr12	-	172	1	Intergenic	novelGene_2737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	85763899	85763727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_85763700_85763900
Isoform_35490_34	chr12	+	176	1	Intergenic	novelGene_2738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCGGCT	NA	False	NA	NA	False	NA	NA	NA	85790954	85791130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_85791000_85791100
Isoform_35491_8	chr11	-	176	1	Intergenic	novelGene_1419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGAACTCCTCCCT	NA	False	NA	NA	False	NA	NA	NA	29503306	29503130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_29503100_29503300
Isoform_3550_184	chr10	-	3014	21	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	33.8096140173176	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAATACAAGACTGAG	7810	False	NA	7	True	AATAAA	-26	NA	81121645	81109041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
Isoform_35500_45	chr11	-	173	1	Intergenic	novelGene_2234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107054327	107054154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_107054200_107054300
Isoform_35501_41	chr12	+	3792	1	NIC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	1	-36058	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86516891	86520683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_86516900_86520700
Isoform_35506_3	chr12	-	4209	1	Intergenic	novelGene_2740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGCTATTACACTTATC	NA	False	NA	NA	False	AAAACA	-42	NA	86544731	86540522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_86540500_86544700
Isoform_3552_156	chr10	-	3002	21	FSM	ENSMUSG00000034917.9	ENSMUST00000045744.7	3024	21	2	20	2	1	multi-exon	FALSE	canonical	3	41	junction_20	26.4920271025077	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTTATATTAG	7299	False	NA	-12	True	AATAAA	-7	NA	81127099	81109060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81126881
Isoform_35535_12	chr12	-	191	1	Intergenic	novelGene_2741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAATAAAACAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	86643633	86643442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_86643400_86643600
Isoform_35538_28	chr12	-	177	1	Intergenic	novelGene_2742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATATTTATTT	9953	False	NA	NA	False	NA	NA	NA	86875920	86875743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_86875700_86875900
Isoform_3554_50	chr10	-	2924	21	FSM	ENSMUSG00000034917.9	ENSMUST00000219479.2	2901	21	-1	-22	-1	1	multi-exon	FALSE	canonical	3	20	junction_20	30.1312130522487	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATACAAGACTGAGGA	6982	False	NA	9	True	AATAAA	-28	NA	81127416	81109039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81127297
Isoform_35542_53	chr12	-	181	1	Intergenic	novelGene_2744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAAAC	3851	False	NA	NA	False	NA	NA	NA	86893171	86892990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_86893000_86893200
Isoform_35543_24	chr12	-	169	1	Intergenic	novelGene_2745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTTCAGGAGTC	NA	False	NA	NA	False	NA	NA	NA	86908356	86908187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_86908200_86908400
Isoform_35544_25	chr12	+	195	1	Intergenic	novelGene_2746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAATAAATAAAAATAAA	6466	False	NA	35	True	NA	NA	NA	86909171	86909366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_86909200_86909400
Isoform_35545_713	chr12	-	4098	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	-1	1	-1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	713	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCCCTGAGTCAGCAA	NA	False	NA	-15	True	AATAAA	-15	NA	86931573	86927475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_86927500_86931600
Isoform_35546_146	chr12	-	4197	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	-100	1	-100	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCCCTGAGTCAGCAA	NA	False	NA	-15	True	AATAAA	-15	NA	86931672	86927475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_86927500_86931700
Isoform_3558_10	chr10	-	2536	7	FSM	ENSMUSG00000020232.18	ENSMUST00000132313.2	2501	7	-35	0	20	0	multi-exon	FALSE	canonical	3	543	junction_2	31.1202863454407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	False	NA	-11	True	AATAAA	-17	NA	81186238	81181884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719
Isoform_35593_3	chr12	+	175	1	Intergenic	novelGene_2747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAGAAAAAAAGA	2064	False	NA	NA	False	NA	NA	NA	86954804	86954979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_86954800_86955000
Isoform_35594_6	chr12	+	178	1	Intergenic	novelGene_2748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAAAG	7161	False	NA	NA	False	NA	NA	NA	86959901	86960079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_86959900_86960100
Isoform_35595_13	chr12	-	176	1	Intergenic	novelGene_2749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATGTTAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	87004530	87004354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_87004400_87004500
Isoform_35602_20	chr12	-	173	1	Intergenic	novelGene_2750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAGAAATACAT	NA	False	NA	NA	False	NA	NA	NA	87241460	87241287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_87241300_87241500
Isoform_35604_16	chr12	+	173	1	Intergenic	novelGene_2751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACAAAAC	7382	False	NA	NA	False	NA	NA	NA	87274110	87274283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_87274100_87274300
Isoform_35609_4	chr12	+	4818	1	FSM	ENSMUSG00000111942.2	ENSMUST00000217708.2	6092	1	3270	-1996	3270	1996	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCAGATTCTGTGCAA	NA	False	NA	NA	False	AATAAA	-41	NA	10205411	10210229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_10205400_10210200
Isoform_35611_4	chr12	+	3536	1	FSM	ENSMUSG00000111942.2	ENSMUST00000217708.2	6092	1	4552	-1996	4552	1996	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCAGATTCTGTGCAA	NA	False	NA	NA	False	AATAAA	-41	NA	10206693	10210229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_10206700_10210200
Isoform_35613_5	chr12	+	2674	1	FSM	ENSMUSG00000111942.2	ENSMUST00000217708.2	6092	1	5414	-1996	5414	1996	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCAGATTCTGTGCAA	NA	False	NA	NA	False	AATAAA	-41	NA	10207555	10210229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_10207600_10210200
Isoform_35615_6	chr12	+	2628	1	Intergenic	novelGene_2752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAAATACATG	NA	False	NA	NA	False	NA	NA	NA	87346643	87349271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_87346600_87349300
Isoform_35617_8	chr18	-	176	1	Intergenic	novelGene_5557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAATCTCA	NA	False	NA	NA	False	NA	NA	NA	82989485	82989309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_82989300_82989500
Isoform_35618_5	chr12	+	2384	1	NIC	ENSMUSG00000020621.7	novel	1480	2	NA	NA	11	-2396	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10440782	10443166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_10440800_10443200
Isoform_35619_5	chr12	+	2305	1	NIC	ENSMUSG00000020621.7	novel	1480	2	NA	NA	90	-2396	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10440861	10443166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_10440900_10443200
Isoform_35622_31	chr12	-	1154	1	FSM	ENSMUSG00000079036.11	ENSMUST00000091090.5	1335	1	182	-1	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87490605	87489451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_87489500_87490600
Isoform_35627_53	chr12	+	175	1	Intergenic	novelGene_2754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	-31	True	NA	NA	NA	87504457	87504632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_87504500_87504600
Isoform_35628_144	chr12	-	182	1	Intergenic	novelGene_2755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87508262	87508080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_87508100_87508300
Isoform_35629_1460	chr12	-	1743	1	FSM	ENSMUSG00000066632.4	ENSMUST00000085735.4	1255	1	-73	-415	-73	415	mono-exon	FALSE	NA	NA	NA	NA	NA	1460	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGAAAAAAAAAAAATCT	NA	False	NA	NA	False	AATAAA	-12	NA	10950313	10948570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_10948600_10950300
Isoform_3563_268	chr10	-	1628	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	-3	-4	-1	1	multi-exon	FALSE	canonical	3	490	junction_7	50.249222630803	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATATTTGTGGCTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	81186261	81181880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
Isoform_35649_30	chr12	+	178	1	Intergenic	novelGene_2423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATGAGTCAGAATC	NA	False	NA	NA	False	NA	NA	NA	11133460	11133638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_11133500_11133600
Isoform_3565_97	chr10	-	1545	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105324.9	1540	10	-1	-4	-1	1	multi-exon	FALSE	canonical	3	76	junction_9	161.527966465926	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATATTTGTGGCTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	81186261	81181880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186106
Isoform_35654_4	chr12	+	407	1	Intergenic	novelGene_2756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGAGCACTT	NA	False	NA	NA	False	NA	NA	NA	91182167	91182574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_91182200_91182600
Isoform_35655_4	chr12	+	1545	1	Intergenic	novelGene_2757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91295451	91296996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_91295500_91297000
Isoform_35656_7	chr12	+	514	1	Intergenic	novelGene_2758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91296482	91296996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_91296500_91297000
Isoform_35662_6	chr12	-	3392	1	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	31355	1	30985	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTATTTTGCAGTT	NA	False	NA	-1	True	AATAAA	-22	NA	91525428	91522036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_91522000_91525400
Isoform_35665_5	chr12	-	4203	1	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	30543	2	30173	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGTATTTTGCAGT	NA	False	NA	-2	True	AATAAA	-21	NA	91526240	91522037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_91522000_91526200
Isoform_3567_146	chr10	-	1438	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	22	3	-14	0	multi-exon	FALSE	canonical	3	169	junction_9	133.860992944542	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	False	NA	-11	True	AATAAA	-17	NA	81186292	81181884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
Isoform_35674_4	chr12	+	1254	1	Antisense	novelGene_ENSMUSG00000020962.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTCAAC	NA	False	NA	NA	False	TATAAA	-32	NA	91523833	91525087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_91523800_91525100
Isoform_35675_5	chr12	+	514	1	Antisense	novelGene_ENSMUSG00000020962.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTATTACCAGTAATGGA	NA	False	NA	NA	False	AAAAAG	-42	NA	91524315	91524829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_91524300_91524800
Isoform_35676_10	chr12	-	161	1	Intergenic	novelGene_2759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAGTTATTAGCTA	NA	False	NA	NA	False	NA	NA	NA	91597235	91597074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_91597100_91597200
Isoform_35677_3	chr12	-	2666	1	NIC	ENSMUSG00000020961.16	novel	731	4	NA	NA	2	9331	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACTGAAAAAAAAAAAAAAA	145	False	NA	NA	False	NA	NA	NA	91745909	91743243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_91743200_91745900
Isoform_35679_15	chr12	-	176	1	Intergenic	novelGene_2760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	91925944	91925768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_91925800_91925900
Isoform_35682_8	chr12	-	181	1	Intergenic	novelGene_2424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAACCTGATCAAA	NA	False	NA	NA	False	NA	NA	NA	11174404	11174223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_11174200_11174400
Isoform_35683_7	chr12	-	3821	1	Intergenic	novelGene_2761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTTTGTTGCGTC	NA	False	NA	NA	False	NA	NA	NA	93509221	93505400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_93505400_93509200
Isoform_35684_4	chr12	-	2445	1	FSM	ENSMUSG00000094935.3	ENSMUST00000180321.3	678	1	-735	-1032	-735	1032	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTGGATGAGAATGAAGA	NA	False	NA	NA	False	NA	NA	NA	93896179	93893734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_93893700_93896200
Isoform_35685_10	chr12	-	222	1	Intergenic	novelGene_2762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGCTTTGATTTCTTT	NA	False	NA	NA	False	GATAAA	-13	NA	94063227	94063005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_94063000_94063200
Isoform_35686_57	chrX	+	176	1	Intergenic	novelGene_11969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	55912448	55912624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_55912400_55912600
Isoform_35687_4	chr12	+	293	1	Intergenic	novelGene_2425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAGAAAGCTACCAGAG	NA	False	NA	NA	False	NA	NA	NA	11197950	11198243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_11198000_11198200
Isoform_35689_4	chr12	+	187	1	Intergenic	novelGene_2763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTATAGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	96126539	96126726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_96126500_96126700
Isoform_3569_12	chr10	-	1917	8	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	498	junction_7	43.6834625225518	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186261	81181881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81185323_81185967
Isoform_35692_13	chr12	-	171	1	FSM	ENSMUSG00000043483.5	ENSMUST00000052882.5	636	1	616	-151	616	151	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAAAGATGTGGTTATG	NA	False	NA	NA	False	NA	NA	NA	96889216	96889045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_96889000_96889200
Isoform_35698_13	chr12	+	152	1	Intergenic	novelGene_2764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	98560908	98561060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_98560900_98561100
Isoform_35699_7	chr12	-	294	1	Intergenic	novelGene_2765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATCTCCATCATTG	NA	False	NA	NA	False	NA	NA	NA	98587320	98587026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_98587000_98587300
Isoform_35701_5	chr12	+	2181	1	FSM	ENSMUSG00000021007.15	ENSMUST00000222195.2	2193	1	11	1	11	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	98594436	98596617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98594400_98596600
Isoform_35704_35	chr12	+	175	1	Intergenic	novelGene_2766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	98670893	98671068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_98670900_98671100
Isoform_35706_419	chr12	-	177	1	Intergenic	novelGene_2426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11275617	11275440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_11275400_11275600
Isoform_35707_48	chr12	+	180	1	Intergenic	novelGene_2767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATACTGTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	98845949	98846129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_98845900_98846100
Isoform_35708_41	chr12	+	172	1	Intergenic	novelGene_2768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCCTAAGA	NA	False	NA	NA	False	NA	NA	NA	98970679	98970851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_98970700_98970900
Isoform_35710_36	chr12	-	174	1	Intergenic	novelGene_2769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	99143768	99143594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_99143600_99143800
Isoform_35711_4	chr12	-	167	1	ISM	ENSMUSG00000033713.13	ENSMUST00000046859.12	7705	6	203547	6	101027	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGTATTGTGTGTTGT	6156	False	NA	NA	False	AATAAA	-24	NA	99156509	99156342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_99156300_99156500
Isoform_35712_3	chr12	-	3619	1	ISM	ENSMUSG00000033713.13	ENSMUST00000046859.12	7705	6	200092	9	97572	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATAAGTATTGTGTGT	2701	False	NA	NA	False	AATAAA	-21	NA	99159964	99156345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_99156300_99160000
Isoform_35713_3	chr12	-	3029	1	ISM	ENSMUSG00000033713.13	ENSMUST00000046859.12	7705	6	200679	12	98159	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAAAATAAGTATTGTG	3288	False	NA	NA	False	AATAAA	-18	NA	99159377	99156348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_99156300_99159400
Isoform_35714_8	chr12	+	2585	1	Intergenic	novelGene_2770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99213881	99216466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_99213900_99216500
Isoform_35715_3	chr12	+	218	1	Intergenic	novelGene_2771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCTTAGTGGGCCTGA	NA	False	NA	NA	False	NA	NA	NA	99306748	99306966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_99306700_99307000
Isoform_35717_37	chr12	-	164	1	FSM	ENSMUSG00000113003.2	ENSMUST00000223213.2	3370	1	3198	8	3198	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATCTCAAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99332974	99332810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_99332800_99333000
Isoform_35718_4	chr12	-	181	1	Intergenic	novelGene_2381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCTAATTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	3515740	3515559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_3515600_3515700
Isoform_35719_159	chr12	+	177	1	Intergenic	novelGene_2772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAGACTACA	NA	False	NA	NA	False	NA	NA	NA	99400921	99401098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_99400900_99401100
Isoform_3572_20	chr10	-	1696	9	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	169	junction_8	141.437044298868	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186261	81181885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81185323_81185967_81186024_81186240
Isoform_35720_7	chr12	-	182	1	Intergenic	novelGene_2773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGTACATCCTGT	6845	False	NA	NA	False	NA	NA	NA	99413665	99413483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_99413500_99413700
Isoform_35721_6	chr12	-	180	1	Intergenic	novelGene_2774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	99463262	99463082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_99463100_99463300
Isoform_35722_3	chr12	+	159	1	Intergenic	novelGene_2775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	99507412	99507571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_99507400_99507600
Isoform_35723_42	chr12	-	179	1	Intergenic	novelGene_2776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	99531784	99531605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_99531600_99531800
Isoform_35727_21	chr12	-	178	1	Intergenic	novelGene_2777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCCCACTCTTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	100140193	100140015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_100140000_100140200
Isoform_35735_10	chr12	+	175	1	Intergenic	novelGene_2778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTTAAAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	100423218	100423393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_100423200_100423400
Isoform_3574_11	chr10	-	1664	9	NIC	ENSMUSG00000020232.18	novel	1621	9	NA	NA	15	1	intron_retention	FALSE	canonical	3	11	junction_4	185.412883856543	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATATTTGTGGCTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	81186243	81181880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183397_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
Isoform_35740_22	chr12	-	190	1	Intergenic	novelGene_2779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATTACCTCATGATTTT	NA	False	NA	NA	False	NA	NA	NA	100760198	100760008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_100760000_100760200
Isoform_35741_3	chr12	-	186	1	Intergenic	novelGene_2780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTAAAAAAAGAGCTCTC	NA	False	NA	NA	False	NA	NA	NA	100796633	100796447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_100796400_100796600
Isoform_35743_50	chr10	-	176	1	Intergenic	novelGene_795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTGCACTG	NA	False	NA	NA	False	NA	NA	NA	35868781	35868605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_35868600_35868800
Isoform_35748_291	chr12	+	177	1	Intergenic	novelGene_2782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACACTC	NA	False	NA	NA	False	NA	NA	NA	100882637	100882814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_100882600_100882800
Isoform_35749_6	chr12	+	165	1	Intergenic	novelGene_2783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATCCTTCTAGCTA	3618	False	NA	NA	False	NA	NA	NA	100996589	100996754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_100996600_100996800
Isoform_3575_10	chr10	-	1464	10	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-3	1	intron_retention	FALSE	canonical	3	11	junction_4	201.633208121291	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTAATATTTGTGGCT	NA	False	NA	-10	True	AATAAA	-18	NA	81186263	81181883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183397_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
Isoform_35752_10	chr12	+	169	1	Intergenic	novelGene_2785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAG	4737	False	NA	NA	False	NA	NA	NA	101088556	101088725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_101088600_101088700
Isoform_35753_9	chr12	-	191	1	ISM	ENSMUSG00000021187.15	ENSMUST00000162735.8	5290	12	70897	1993	61910	-871	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTCAGGTAGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	101613885	101613694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_101613700_101613900
Isoform_35755_7	chr12	+	170	1	Intergenic	novelGene_2786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	101750121	101750291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_101750100_101750300
Isoform_35756_4	chr12	-	1258	1	Intergenic	novelGene_2427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11362827	11361569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_11361600_11362800
Isoform_35758_8	chr12	-	178	1	Intergenic	novelGene_2787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7606	False	NA	NA	False	NA	NA	NA	101829922	101829744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_101829700_101829900
Isoform_35762_22	chr12	-	2639	1	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	16	-22640	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101924486	101921847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_101921800_101924500
Isoform_35763_4	chr12	+	179	1	Intergenic	novelGene_2788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAGTAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	101934134	101934313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_101934100_101934300
Isoform_35776_13	chr12	+	175	1	Intergenic	novelGene_2789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAACAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	102682099	102682274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_102682100_102682300
Isoform_35781_5	chr12	+	1665	1	Genic_Genomic	ENSMUSG00000046675.8	novel	NA	NA	NA	NA	-25	-2160	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTTGCTTGCTTTAA	NA	False	NA	1	True	CATAAA	-16	NA	102709995	102711660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_102710000_102711700
Isoform_35783_8	chr12	-	417	1	NIC	ENSMUSG00000041716.8	novel	2795	2	NA	NA	889	-15635	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCGT	6379	False	NA	NA	False	NA	NA	NA	102724042	102723625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_102723600_102724000
Isoform_35792_3	chr12	-	150	1	Intergenic	novelGene_2790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGGAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	102758970	102758820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_102758800_102759000
Isoform_35793_14	chr12	+	184	1	Antisense	novelGene_ENSMUSG00000041702.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGTGAGGA	NA	False	NA	NA	False	NA	NA	NA	102770472	102770656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_102770500_102770700
Isoform_35795_3	chr12	+	189	1	Intergenic	novelGene_2792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGGTGGGAGAGATGGT	NA	False	NA	NA	False	NA	NA	NA	102841375	102841564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_102841400_102841600
Isoform_35796_10	chr12	-	175	1	Intergenic	novelGene_2428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	11865995	11865820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_11865800_11866000
Isoform_35798_104	chr12	-	176	1	Intergenic	novelGene_2793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	103486661	103486485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_103486500_103486700
Isoform_35799_20	chr12	+	701	1	FSM	ENSMUSG00000078377.6	ENSMUST00000105169.6	614	1	-37	-50	-37	50	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	AATAAA	-17	NA	12073008	12073709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_12073000_12073700
Isoform_35801_10	chr12	-	180	1	Intergenic	novelGene_2794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAATTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	103518746	103518566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_103518600_103518700
Isoform_35803_3	chr12	+	3486	1	FSM	ENSMUSG00000114826.3	ENSMUST00000232932.2	4429	1	1	942	1	-672	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104439590	104443076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_104439600_104443100
Isoform_35804_6	chr12	-	177	1	Intergenic	novelGene_2796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104575342	104575165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_104575200_104575300
Isoform_35807_44	chr4	+	157	1	Intergenic	novelGene_7980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATAAATAAATC	2396	False	NA	NA	False	NA	NA	NA	132354168	132354325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132354200_132354300
Isoform_35809_6	chr12	-	177	1	Intergenic	novelGene_2797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGGGAGCAGAGGT	1917	False	NA	NA	False	NA	NA	NA	104986847	104986670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_104986700_104986800
Isoform_35810_10	chr12	-	1789	1	FSM	ENSMUSG00002076601.1	ENSMUST00020183435.1	275	1	-901	-613	-901	613	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAG	8365	False	NA	NA	False	NA	NA	NA	104998509	104996720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_104996700_104998500
Isoform_35813_5	chr12	-	178	1	Intergenic	novelGene_2799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGACACAAGT	NA	False	NA	NA	False	NA	NA	NA	105046057	105045879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_105045900_105046100
Isoform_35814_10	chr12	+	176	1	Intergenic	novelGene_2800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGTATTTGTATGTA	NA	False	NA	NA	False	NA	NA	NA	105046348	105046524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_105046300_105046500
Isoform_35815_11	chr12	+	177	1	Intergenic	novelGene_2801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAACTGTAAT	NA	False	NA	NA	False	NA	NA	NA	105083368	105083545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_105083400_105083500
Isoform_35818_15	chr12	+	178	1	Intergenic	novelGene_2802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGTGAAATGCT	NA	False	NA	NA	False	NA	NA	NA	105394376	105394554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_105394400_105394600
Isoform_35819_3	chr12	+	2476	1	Genic_Genomic	ENSMUSG00000021070.7	novel	NA	NA	NA	NA	-76	-29612	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTGGA	NA	False	NA	NA	False	NA	NA	NA	105529408	105531884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_105529400_105531900
Isoform_35821_12	chr12	+	177	1	Intergenic	novelGene_2803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTAGTAGTCT	NA	False	NA	NA	False	NA	NA	NA	105635895	105636072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_105635900_105636100
Isoform_35822_5	chr12	-	181	1	Intergenic	novelGene_2804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGTTTTTATCTCA	7220	False	NA	NA	False	NA	NA	NA	105639518	105639337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_105639300_105639500
Isoform_35826_46	chr12	+	172	1	Intergenic	novelGene_2429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAAGGCCTTA	NA	False	NA	NA	False	NA	NA	NA	12720817	12720989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_12720800_12721000
Isoform_35828_4	chr12	+	280	1	Intergenic	novelGene_2805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCAGTATGGCACTGAT	NA	False	NA	NA	False	NA	NA	NA	105731376	105731656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_105731400_105731700
Isoform_35829_4	chr12	-	180	1	Intergenic	novelGene_2806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGCTAGATAAG	NA	False	NA	NA	False	NA	NA	NA	105763882	105763702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_105763700_105763900
Isoform_35840_31	chr12	-	173	1	Intergenic	novelGene_2807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGGGGCGGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	105807106	105806933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_105806900_105807100
Isoform_35841_13	chr12	-	172	1	Intergenic	novelGene_2808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGACTGAAACAATCA	NA	False	NA	NA	False	NA	NA	NA	105860422	105860250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_105860200_105860400
Isoform_35843_14	chr12	+	167	1	Intergenic	novelGene_2809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAGTAAGGTGGATTA	NA	False	NA	NA	False	NA	NA	NA	105932654	105932821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_105932700_105932800
Isoform_35845_5	chr12	-	162	1	Intergenic	novelGene_2430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	12839676	12839514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_12839500_12839700
Isoform_35847_7	chr12	-	158	1	Intergenic	novelGene_2810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	106102400	106102242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_106102200_106102400
Isoform_35848_6	chr12	-	172	1	Intergenic	novelGene_2811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	106138532	106138360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_106138400_106138500
Isoform_35849_4	chr12	-	172	1	Intergenic	novelGene_2812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAACACACACAATGAGA	NA	False	NA	NA	False	NA	NA	NA	106187100	106186928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_106186900_106187100
Isoform_35850_67	chr12	-	177	1	Intergenic	novelGene_2382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGGGTTTCA	NA	False	NA	NA	False	NA	NA	NA	3542548	3542371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_3542400_3542500
Isoform_35851_47	chr12	+	177	1	Intergenic	novelGene_2431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAATGCCACTGAAG	NA	False	NA	2	True	NA	NA	NA	12851044	12851221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_12851000_12851200
Isoform_35852_7	chr12	+	2424	1	Antisense	novelGene_ENSMUSG00000048251.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTATGATGCTCCGTCG	NA	False	NA	NA	False	NA	NA	NA	107881853	107884277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_107881900_107884300
Isoform_35854_156	chr12	-	178	1	Intergenic	novelGene_2813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATCCA	NA	False	NA	NA	False	NA	NA	NA	108065897	108065719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_108065700_108065900
Isoform_35861_15	chr12	+	169	1	Intergenic	novelGene_2814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTTTTGTTTGTTTGT	1176	False	NA	NA	False	NA	NA	NA	108188354	108188523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_108188400_108188500
Isoform_35862_4	chr12	-	177	1	Intergenic	novelGene_2815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	108250121	108249944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_108249900_108250100
Isoform_35863_9	chr12	-	171	1	Intergenic	novelGene_2816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGGGGGGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	108325598	108325427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_108325400_108325600
Isoform_35864_99	chr12	-	175	1	Intergenic	novelGene_2817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCTTAAATAAATA	NA	False	NA	-7	True	NA	NA	NA	108444840	108444665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_108444700_108444800
Isoform_35866_13	chr12	+	169	1	Intergenic	novelGene_2818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAACAAC	7028	False	NA	NA	False	NA	NA	NA	108561993	108562162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_108562000_108562200
Isoform_35867_18	chr12	-	230	1	Intergenic	novelGene_2819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCAAGCAAACAGCC	NA	False	NA	NA	False	NA	NA	NA	108577181	108576951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_108577000_108577200
Isoform_35869_13	chr12	+	192	1	Intergenic	novelGene_2820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGTAGAACTTGTAGA	NA	False	NA	NA	False	NA	NA	NA	108711891	108712083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_108711900_108712100
Isoform_35871_23	chr12	-	176	1	Intergenic	novelGene_2821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	108731145	108730969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_108731000_108731100
Isoform_35872_35	chr2	+	175	1	Intergenic	novelGene_6882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180357095	180357270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_180357100_180357300
Isoform_35875_6	chr12	+	2629	1	ISM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	24545	2	11279	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGTGTTCTTGTTTG	NA	False	NA	23	True	AATAAA	-23	NA	108783443	108786072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_108783400_108786100
Isoform_35876_6	chr12	-	190	1	Intergenic	novelGene_2822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTAATTAAGAGAATAAGT	5192	False	NA	NA	False	NA	NA	NA	108789004	108788814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_108788800_108789000
Isoform_35877_3	chr12	-	179	1	Intergenic	novelGene_2823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTCCACTTCTA	NA	False	NA	NA	False	NA	NA	NA	108806660	108806481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_108806500_108806700
Isoform_35882_5	chr12	+	227	1	FSM	ENSMUSG00000066629.3	ENSMUST00000085720.3	315	1	123	-35	123	35	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	12962145	12962372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_12962100_12962400
Isoform_35884_3	chr12	+	178	1	Intergenic	novelGene_2824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	780	False	NA	NA	False	NA	NA	NA	109458866	109459044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_109458900_109459000
Isoform_35889_26	chr12	-	4333	1	Intergenic	novelGene_2825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACACAGCTGTGGTCCCT	NA	False	NA	NA	False	NA	NA	NA	109524641	109520308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_109520300_109524600
Isoform_3589_1388	chr10	-	2361	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	43	653	-10	223	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTCGGTCTCCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	81214307	81202708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
Isoform_35890_6	chr12	-	4989	1	Antisense	novelGene_ENSMUSG00000021268.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGATGCT	9775	False	NA	NA	False	AAAACA	-36	NA	109536127	109531138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_109531100_109536100
Isoform_35893_3	chr12	-	901	1	Intergenic	novelGene_2826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACATTTAATTGAACAT	NA	False	NA	NA	False	NA	NA	NA	109548322	109547421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_109547400_109548300
Isoform_35895_3	chr12	-	2926	1	Intergenic	novelGene_2827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACATTTAATTGAACAT	9754	False	NA	NA	False	NA	NA	NA	109550347	109547421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_109547400_109550300
Isoform_35896_3	chr12	-	3389	1	Intergenic	novelGene_2828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACATTTAATTGAACAT	9759	False	NA	NA	False	NA	NA	NA	109550810	109547421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_109547400_109550800
Isoform_35899_10	chr12	+	3176	1	FSM	ENSMUSG00000104858.3	ENSMUST00000199494.3	62	1	60	-3174	60	3174	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	178	False	NA	NA	False	NA	NA	NA	109561820	109564996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109561800_109565000
Isoform_359_19	SIRV12001	+	4834	1	FSM	SIRV12001A	SIRV12001	12029	1	7195	0	7195	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	7195	12029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV12001_+_7200_12000
Isoform_35902_39	chr12	-	3170	1	Antisense	novelGene_ENSMUSG00000097451.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTAACCCTTT	NA	False	NA	NA	False	NA	NA	NA	109574631	109571461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_109571500_109574600
Isoform_35903_13	chr12	-	3482	1	Antisense	novelGene_ENSMUSG00000097451.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCCTTTCTAAACTCAG	NA	False	NA	NA	False	NA	NA	NA	109574933	109571451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_109571500_109574900
Isoform_35904_4	chr12	+	237	1	FSM	ENSMUSG00002076155.1	ENSMUST00020183598.1	73	1	3	-167	3	167	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACATAAAACAAAGCA	1627	False	NA	NA	False	NA	NA	NA	109602448	109602685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_109602400_109602700
Isoform_35912_18	chr12	-	1031	1	Antisense	novelGene_ENSMUSG00000102657.2_AS_novelGene_ENSMUSG00000065757.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAACTTAACTATTGT	NA	False	NA	NA	False	AATACA	-38	NA	109641135	109640104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_109640100_109641100
Isoform_35919_189	chr12	-	770	1	FSM	ENSMUSG00000113625.2	ENSMUST00000222259.2	642	1	-39	-89	-39	89	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGACCTGTCAGGTCA	NA	False	NA	NA	False	AATAAA	-40	NA	109861566	109860796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_109860800_109861600
Isoform_3592_350	chr10	-	2407	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	0	650	0	226	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCTCCTGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	81214350	81202705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
Isoform_35921_5	chr12	-	3676	1	FSM	ENSMUSG00000080356.3	ENSMUST00000116706.3	82	1	-937	-2657	-937	2657	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAACGTGTACAGTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	110245500	110241824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110241800_110245500
Isoform_35923_48	chr12	+	1867	1	FSM	ENSMUSG00000075707.7	ENSMUST00000173014.3	2030	1	162	1	-30	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTTGGTCCGTTTATT	NA	False	NA	26	True	AATAAA	-23	NA	110245663	110247530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110245700_110247500
Isoform_35924_3	chr12	+	2446	1	Antisense	novelGene_ENSMUSG00000037169.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12988998	12991444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_12989000_12991400
Isoform_35927_4	chr12	+	172	1	Intergenic	novelGene_2831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGGAAAGTAGGCC	NA	False	NA	NA	False	NA	NA	NA	110405804	110405976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_110405800_110406000
Isoform_35928_31	chr12	-	176	1	Intergenic	novelGene_2832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	110408662	110408486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_110408500_110408700
Isoform_35929_61	chr12	-	176	1	Intergenic	novelGene_2833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGGCCAA	1730	False	NA	NA	False	NA	NA	NA	110433302	110433126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_110433100_110433300
Isoform_35932_3	chr12	-	173	1	Intergenic	novelGene_2432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGACCC	NA	False	NA	NA	False	NA	NA	NA	13002316	13002143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_13002100_13002300
Isoform_35935_17	chr12	-	179	1	Intergenic	novelGene_2433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAGAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	13026519	13026340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_13026300_13026500
Isoform_35937_3	chr12	+	4481	1	NIC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	20	-35584	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6491	False	NA	NA	False	NA	NA	NA	110567905	110572386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_110567900_110572400
Isoform_35941_83	chr12	+	177	1	Intergenic	novelGene_2834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGAGGC	1462	False	NA	NA	False	NA	NA	NA	110610814	110610991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_110610800_110611000
Isoform_35942_6	chr12	+	180	1	Intergenic	novelGene_2835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCAGGGCTGG	2746	False	NA	NA	False	NA	NA	NA	110612098	110612278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_110612100_110612300
Isoform_35944_11	chrX	+	174	1	Intergenic	novelGene_12035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTCTTAAATA	NA	False	NA	NA	False	NA	NA	NA	78340497	78340671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_78340500_78340700
Isoform_35945_3	chr12	-	171	1	Intergenic	novelGene_2836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGCTGATTACAAG	NA	False	NA	NA	False	NA	NA	NA	110642555	110642384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_110642400_110642600
Isoform_35947_3	chr12	+	176	1	Intergenic	novelGene_2837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGGCTTCCTCGCAG	NA	False	NA	NA	False	NA	NA	NA	110647985	110648161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_110648000_110648200
Isoform_35957_6	chr12	-	174	1	Intergenic	novelGene_2838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTTACATC	2835	False	NA	NA	False	NA	NA	NA	110679779	110679605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_110679600_110679800
Isoform_35958_7	chr12	-	170	1	Intergenic	novelGene_2839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATATCTATCTA	4932	False	NA	NA	False	NA	NA	NA	110697724	110697554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_110697600_110697700
Isoform_35960_6	chr12	+	3616	1	FSM	ENSMUSG00000037957.15	ENSMUST00000191983.2	2252	1	31	-1395	2	-607	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	5374	False	NA	NA	False	NA	NA	NA	110704453	110708069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110704500_110708100
Isoform_35962_26	chr12	-	177	1	Intergenic	novelGene_2840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTCAAGACA	NA	False	NA	NA	False	NA	NA	NA	110716626	110716449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_110716400_110716600
Isoform_35964_24	chr12	+	231	1	Intergenic	novelGene_2841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATTTTCTATATGCT	NA	False	NA	NA	False	AAAAAG	-33	NA	110733038	110733269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_110733000_110733300
Isoform_35965_12	chr12	-	190	1	Intergenic	novelGene_2842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACTATTAAAAACG	NA	False	NA	NA	False	NA	NA	NA	110754793	110754603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_110754600_110754800
Isoform_35966_7	chr12	+	173	1	Intergenic	novelGene_2843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAATAATCAGAA	NA	False	NA	NA	False	NA	NA	NA	110784086	110784259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_110784100_110784300
Isoform_35967_163	chr1	+	177	1	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATACATGC	6805	False	NA	NA	False	NA	NA	NA	16716280	16716457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_16716300_16716500
Isoform_35968_12	chr12	+	266	1	Intergenic	novelGene_2844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATGTTCTGAACAGTTT	NA	False	NA	NA	False	NA	NA	NA	110796959	110797225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_110797000_110797200
Isoform_35970_32	chr12	+	176	1	Intergenic	novelGene_2845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACCTCTGAT	NA	False	NA	NA	False	NA	NA	NA	110804525	110804701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_110804500_110804700
Isoform_35973_3	chr12	+	242	1	Antisense	novelGene_ENSMUSG00000097832.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTATTTTTCTTTCTTTTT	NA	False	NA	NA	False	AATAGA	-28	NA	110808479	110808721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_110808500_110808700
Isoform_35974_7	chr12	+	2671	1	NIC	ENSMUSG00000021271.6	novel	502	2	NA	NA	6	-2355	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAACCAAAGAC	NA	False	NA	NA	False	NA	NA	NA	110816718	110819389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_110816700_110819400
Isoform_35975_428	chr12	-	875	1	FSM	ENSMUSG00000091498.5	ENSMUST00000181662.2	330	1	-50	-495	-50	495	mono-exon	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	110825378	110824503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_110824500_110825400
Isoform_35977_4	chr12	+	174	1	Intergenic	novelGene_2846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	110829118	110829292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_110829100_110829300
Isoform_35980_8086	chr12	+	509	1	FSM	ENSMUSG00000096942.2	ENSMUST00000181233.2	438	1	-34	-37	-34	37	mono-exon	FALSE	NA	NA	NA	NA	NA	8086	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	AATAAA	-14	NA	110864513	110865022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_110864500_110865000
Isoform_35986_3	chr12	-	3791	1	Antisense	novelGene_ENSMUSG00000021275.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-38	NA	110924418	110920627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_110920600_110924400
Isoform_35991_64	chr12	-	1359	1	FSM	ENSMUSG00000071414.6	ENSMUST00000166583.4	948	1	-32	-379	-32	379	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAGGTTTTAAAACAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	13506003	13504644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_13504600_13506000
Isoform_35994_3	chr12	-	172	1	Intergenic	novelGene_2847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAAAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	110998739	110998567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_110998600_110998700
Isoform_35996_6	chr12	-	174	1	Intergenic	novelGene_2848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGGGAAACTTAT	NA	False	NA	NA	False	NA	NA	NA	111037358	111037184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111037200_111037400
Isoform_35997_9	chr12	-	182	1	Intergenic	novelGene_2849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATTATACTAAA	NA	False	NA	NA	False	NA	NA	NA	111043853	111043671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111043700_111043900
Isoform_36002_62	chr12	+	169	1	Intergenic	novelGene_2850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111108762	111108931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111108800_111108900
Isoform_36003_5	chr12	+	202	1	Intergenic	novelGene_2851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGGCTCTGACATGTT	NA	False	NA	NA	False	NA	NA	NA	111108973	111109175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111109000_111109200
Isoform_36005_8	chr15	-	178	1	Intergenic	novelGene_4013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79214269	79214091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_79214100_79214300
Isoform_36006_4	chr12	-	165	1	Intergenic	novelGene_2853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGAAAAGGCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	111207569	111207404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111207400_111207600
Isoform_36008_4	chr12	-	4530	1	Antisense	novelGene_ENSMUSG00000021277.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	111216731	111212201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_111212200_111216700
Isoform_36012_198	chr12	+	167	1	Intergenic	novelGene_2854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	111244380	111244547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111244400_111244500
Isoform_36013_20	chr12	+	178	1	Intergenic	novelGene_2855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATGAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	111244604	111244782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111244600_111244800
Isoform_36016_51	chr13	-	175	1	Intergenic	novelGene_3346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAGCAAGCT	NA	False	NA	NA	False	NA	NA	NA	113926696	113926521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_113926500_113926700
Isoform_36017_3	chr12	+	198	1	Intergenic	novelGene_2856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTAATTTACAA	NA	False	NA	NA	False	NA	NA	NA	111309476	111309674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111309500_111309700
Isoform_36018_6	chr12	-	178	1	Intergenic	novelGene_2857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	111318439	111318261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111318300_111318400
Isoform_36020_5	chr12	+	183	1	Intergenic	novelGene_2858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACGTGTAAAGGGCT	734	False	NA	NA	False	NA	NA	NA	111438642	111438825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111438600_111438800
Isoform_36021_7	chr12	+	177	1	Intergenic	novelGene_2859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATATATACAAAGGGG	2176	False	NA	NA	False	NA	NA	NA	111448204	111448381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111448200_111448400
Isoform_36023_10	chr12	+	182	1	Intergenic	novelGene_2860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAATGCTCTTCTGAG	NA	False	NA	NA	False	NA	NA	NA	111488002	111488184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111488000_111488200
Isoform_36024_3	chr12	-	157	1	Intergenic	novelGene_2861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAACAAAAAT	7164	False	NA	NA	False	NA	NA	NA	111493679	111493522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111493500_111493700
Isoform_36030_20	chr12	-	172	1	Intergenic	novelGene_2862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1065	False	NA	NA	False	NA	NA	NA	111514667	111514495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111514500_111514700
Isoform_36032_16	chr12	+	174	1	Intergenic	novelGene_2864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGACAGCTACAGT	NA	False	NA	8	True	NA	NA	NA	111520312	111520486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111520300_111520500
Isoform_36035_39	chr12	+	189	1	Intergenic	novelGene_2865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAAGTTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	111529890	111530079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111529900_111530100
Isoform_36036_14	chr12	-	246	1	Intergenic	novelGene_2866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTGTGTGTGACCA	7269	False	NA	NA	False	NA	NA	NA	111531323	111531077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111531100_111531300
Isoform_36038_19	chr12	+	176	1	Intergenic	novelGene_2867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTTGTGTTGATT	NA	False	NA	NA	False	NA	NA	NA	111572560	111572736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111572600_111572700
Isoform_36040_44	chr12	+	177	1	Intergenic	novelGene_2868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTGATCAG	8395	False	NA	NA	False	NA	NA	NA	111582911	111583088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111582900_111583100
Isoform_36049_3	chr12	+	3716	1	ISM	ENSMUSG00000037486.19	ENSMUST00000111215.10	8887	12	76273	2	9369	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATCTTGTAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	3553129	3556845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_3553100_3556800
Isoform_36050_3	chr12	+	2908	1	ISM	ENSMUSG00000037486.19	ENSMUST00000111215.10	8887	12	77079	4	10175	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAAATCTTGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	3553935	3556843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_3553900_3556800
Isoform_36053_17	chr12	-	218	1	Intergenic	novelGene_2869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTTAGTTTTATATA	NA	False	NA	NA	False	ACTAAA	-9	NA	111680496	111680278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111680300_111680500
Isoform_36055_5	chr12	-	511	1	Intergenic	novelGene_2870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTATTTCGATTC	NA	False	NA	NA	False	NA	NA	NA	111687170	111686659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111686700_111687200
Isoform_36056_8	chr12	+	172	1	Intergenic	novelGene_2871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCACT	NA	False	NA	NA	False	NA	NA	NA	111689719	111689891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111689700_111689900
Isoform_36057_3	chr12	-	176	1	Intergenic	novelGene_2872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAGGAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	111690575	111690399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111690400_111690600
Isoform_36058_34	chr12	-	155	1	Intergenic	novelGene_2873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCTAGACAGGGTC	9508	False	NA	NA	False	NA	NA	NA	111703693	111703538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111703500_111703700
Isoform_36059_92	chr12	-	189	1	Intergenic	novelGene_2874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	3748	False	NA	NA	False	NA	NA	NA	111709453	111709264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111709300_111709500
Isoform_36060_47	chr12	-	201	1	Intergenic	novelGene_2875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGTGAGATGGCTCA	3544	False	NA	NA	False	NA	NA	NA	111709657	111709456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_111709500_111709700
Isoform_36061_29	chr12	+	178	1	Intergenic	novelGene_2876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111737605	111737783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111737600_111737800
Isoform_36064_6	chr12	+	1493	2	Antisense	novelGene_ENSMUSG00000021285.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAAACCAACAACACCC	NA	False	NA	NA	False	NA	NA	NA	111829696	111831221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_111830118_111830149
Isoform_36068_3	chr12	+	177	1	Intergenic	novelGene_2877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	112539839	112540016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_112539800_112540000
Isoform_36069_25	chr12	+	171	1	Intergenic	novelGene_2434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCCA	NA	False	NA	NA	False	NA	NA	NA	15579057	15579228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_15579100_15579200
Isoform_36073_7	chr12	-	177	1	Intergenic	novelGene_2435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAATCTGAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	15746617	15746440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_15746400_15746600
Isoform_36074_19	chr12	+	172	1	Intergenic	novelGene_2878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGGAAACACT	NA	False	NA	NA	False	NA	NA	NA	112715895	112716067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_112715900_112716100
Isoform_36075_3	chr12	-	2946	1	ISM	ENSMUSG00000118667.1	ENSMUST00000239525.1	11349	7	24698	6	24698	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCAGTTGTCCGGTTCG	NA	False	NA	NA	False	AATAAA	-10	NA	112741579	112738633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_-_112738600_112741600
Isoform_36080_4	chr12	-	1682	1	Intergenic	novelGene_2879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7262	False	NA	NA	False	NA	NA	NA	112796322	112794640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_112794600_112796300
Isoform_36081_7	chr12	+	175	1	Intergenic	novelGene_2436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	16163745	16163920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_16163700_16163900
Isoform_36082_5	chr12	-	177	1	Intergenic	novelGene_2880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAAAAATCAAAGC	9993	False	NA	NA	False	NA	NA	NA	112843149	112842972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_112843000_112843100
Isoform_36083_9	chr12	+	195	1	Intergenic	novelGene_2437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	16517860	16518055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_16517900_16518100
Isoform_36086_9	chr12	+	350	1	Intergenic	novelGene_2881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112953715	112954065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_112953700_112954100
Isoform_36087_7	chr12	+	167	1	Intergenic	novelGene_2882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	112966433	112966600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_112966400_112966600
Isoform_36089_12	chr12	+	169	1	Intergenic	novelGene_2883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACAAACCAACCA	NA	False	NA	NA	False	NA	NA	NA	113043490	113043659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_113043500_113043700
Isoform_36090_13	chr12	-	1219	1	Intergenic	novelGene_2884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113066383	113065164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_113065200_113066400
Isoform_36099_6	chr12	+	175	1	Intergenic	novelGene_2885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATGATAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	114036351	114036526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_114036400_114036500
Isoform_36101_69	chr12	+	180	1	Intergenic	novelGene_2886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	115936819	115936999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_115936800_115937000
Isoform_36104_4	chr12	-	707	1	Intergenic	novelGene_2887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116244726	116244019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_116244000_116244700
Isoform_36105_11	chr12	-	163	1	Intergenic	novelGene_2888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	116290696	116290533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_116290500_116290700
Isoform_36111_3	chr12	+	5005	1	Antisense	novelGene_ENSMUSG00000020593.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6623	False	NA	NA	False	NA	NA	NA	16628994	16633999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_16629000_16634000
Isoform_36112_3	chr12	-	158	1	Intergenic	novelGene_2889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATAAATAAATCTTTTT	8107	False	NA	NA	False	NA	NA	NA	116477500	116477342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_116477300_116477500
Isoform_36115_12	chr12	-	175	1	Intergenic	novelGene_2890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGATTTATCTATTT	NA	False	NA	NA	False	NA	NA	NA	117129336	117129161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_117129200_117129300
Isoform_36116_20	chr12	-	196	1	Intergenic	novelGene_2891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGATATATAATCACTGC	NA	False	NA	NA	False	NA	NA	NA	117388004	117387808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_117387800_117388000
Isoform_36117_6	chr12	+	176	1	Intergenic	novelGene_2892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGTAGGCAT	NA	False	NA	NA	False	NA	NA	NA	117406227	117406403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_117406200_117406400
Isoform_36119_118	chr12	-	176	1	Intergenic	novelGene_2894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	117666697	117666521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_117666500_117666700
Isoform_36120_8	chr12	+	408	1	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-3	-25759	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGCAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117807615	117808023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_+_117807600_117808000
Isoform_36124_10	chr12	-	181	1	Intergenic	novelGene_2895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAATAAAATAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	118639807	118639626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_118639600_118639800
Isoform_36125_16	chr12	+	174	1	Intergenic	novelGene_2896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTATTCTTATTA	NA	False	NA	NA	False	NA	NA	NA	118839911	118840085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_118839900_118840100
Isoform_36138_6	chr12	+	5022	1	Genic_Genomic	ENSMUSG00000020580.11	novel	NA	NA	NA	NA	-50	-46952	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAAAAATTGTTATAA	1985	False	NA	NA	False	NA	NA	NA	16944845	16949867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_16944800_16949900
Isoform_36139_19	chr12	+	177	1	Intergenic	novelGene_2897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAGCTATGAGGA	NA	False	NA	NA	False	NA	NA	NA	119257227	119257404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_119257200_119257400
Isoform_36141_8	chr12	+	176	1	Intergenic	novelGene_2438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	17009557	17009733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_17009600_17009700
Isoform_36143_4	chr12	+	174	1	Intergenic	novelGene_2439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAATGTGACT	6840	False	NA	NA	False	NA	NA	NA	17040551	17040725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_17040600_17040700
Isoform_36144_5	chr12	-	4445	1	FSM	ENSMUSG00000051726.7	ENSMUST00000170580.3	4789	1	338	6	338	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAACCTGCCTGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	17226551	17222106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_17222100_17226600
Isoform_36147_12	chr12	+	179	1	Intergenic	novelGene_2440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAACACACAGAATTAC	1644	False	NA	NA	False	NA	NA	NA	17366588	17366767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_17366600_17366800
Isoform_36149_11	chr12	-	4539	1	Antisense	novelGene_ENSMUSG00000061458.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17425600	17421061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_17421100_17425600
Isoform_36150_11	chr12	-	3927	1	Antisense	novelGene_ENSMUSG00000061458.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	7072	False	NA	NA	False	NA	NA	NA	17452302	17448375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_17448400_17452300
Isoform_36156_15	chr12	-	175	1	Intergenic	novelGene_2441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATATCTAATTTA	NA	False	NA	NA	False	NA	NA	NA	17652887	17652712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_17652700_17652900
Isoform_36157_16	chr12	+	176	1	Intergenic	novelGene_2442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGTGAGCAGGAAT	NA	False	NA	NA	False	NA	NA	NA	17681577	17681753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_17681600_17681800
Isoform_36165_14	chr12	-	5453	1	FSM	ENSMUSG00000113612.2	ENSMUST00000222538.2	161	1	-4811	-481	-4811	481	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17950284	17944831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_17944800_17950300
Isoform_36166_86	chr12	-	176	1	Intergenic	novelGene_2443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTTAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	17998908	17998732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_17998700_17998900
Isoform_36167_7	chr12	+	171	1	Intergenic	novelGene_2444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTAAAAATGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	18312626	18312797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_18312600_18312800
Isoform_36169_5	chr12	+	254	1	Intergenic	novelGene_2385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3604047	3604301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_3604000_3604300
Isoform_36170_42	chr12	+	1482	1	FSM	ENSMUSG00000113402.2	ENSMUST00000221998.2	324	1	-264	-894	-264	894	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAT	NA	False	NA	NA	False	AAGAAA	-26	NA	18437491	18438973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_18437500_18439000
Isoform_36173_19	chr12	+	168	1	Intergenic	novelGene_2445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18543981	18544149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_18544000_18544100
Isoform_36175_15	chr12	-	190	1	Intergenic	novelGene_2446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAGCCTATTTCAGT	NA	False	NA	NA	False	NA	NA	NA	18906560	18906370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_18906400_18906600
Isoform_36177_3	chr12	+	4568	1	Genic_Genomic	ENSMUSG00000114188.2	novel	NA	NA	NA	NA	-314	-6220	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19094392	19098960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_+_19094400_19099000
Isoform_36179_3	chr12	+	3898	1	FSM	ENSMUSG00000113205.2	ENSMUST00000222931.2	127	1	-251	-3520	-251	3520	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCATGAGTCTCTCATT	NA	False	NA	NA	False	AATAAA	-45	NA	19225852	19229750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_19225900_19229800
Isoform_36181_6	chr12	-	178	1	Intergenic	novelGene_2449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19239401	19239223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_19239200_19239400
Isoform_36182_3	chr12	-	9697	3	Genic_Genomic	ENSMUSG00000113408.2	novel	109	1	NA	NA	-4630	5002	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATAGGACTGCTTTCA	NA	False	NA	NA	False	NA	NA	NA	19350508	19340767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_19342152_19342171_19343274_19343297
Isoform_36183_34	chr12	+	204	1	Intergenic	novelGene_2386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGACACAAAACAGTCTT	NA	False	NA	NA	False	NA	NA	NA	3619692	3619896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_3619700_3619900
Isoform_36186_6	chr12	+	178	1	Intergenic	novelGene_2451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAATTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	19584784	19584962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_19584800_19585000
Isoform_36189_5	chr19	-	177	1	Intergenic	novelGene_5784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38203863	38203686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_38203700_38203900
Isoform_36190_51	chr12	-	182	1	Intergenic	novelGene_2387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAGTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3632334	3632152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_3632200_3632300
Isoform_36194_27	chr12	+	3016	1	FSM	ENSMUSG00000113749.2	ENSMUST00000220565.2	721	1	-2085	-210	-2085	210	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACAGCC	NA	False	NA	NA	False	AATAAA	-34	NA	20465637	20468653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_20465600_20468700
Isoform_36195_119	chr12	-	175	1	Intergenic	novelGene_2388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	74	False	NA	NA	False	NA	NA	NA	3646321	3646146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_3646100_3646300
Isoform_36196_44	chr12	+	177	1	Intergenic	novelGene_2478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAGCTGTATAG	NA	False	NA	NA	False	NA	NA	NA	23855688	23855865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_23855700_23855900
Isoform_36197_4	chr12	-	189	1	Intergenic	novelGene_2453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGCCTATTTCAAT	NA	False	NA	NA	False	NA	NA	NA	20667981	20667792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_20667800_20668000
Isoform_36198_19	chr12	+	157	1	Intergenic	novelGene_2454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	20776262	20776419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_20776300_20776400
Isoform_36199_5	chr12	-	4387	2	Genic_Genomic	ENSMUSG00000099759.2	novel	1735	2	NA	NA	20	-6970	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTCTCTTATTCTGTT	NA	False	NA	0	True	ATTAAA	-24	NA	20865760	20861351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr12_-_20861961_20861982
Isoform_3620_29	chr10	-	3511	10	FSM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	12	-175	12	175	multi-exon	FALSE	canonical	3	18	junction_9	5.66557723732532	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGGTATTTCTATTT	3924	False	NA	-3	True	AATAAA	-13	NA	81262995	81234796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
Isoform_36201_9	chr12	-	1514	1	FSM	ENSMUSG00000091071.3	ENSMUST00000110971.3	1471	1	-42	-1	-42	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTAGACTAT	NA	False	NA	NA	False	AAGAAA	-26	NA	20865770	20864256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_20864300_20865800
Isoform_36202_8	chr12	-	176	1	Intergenic	novelGene_2389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTAT	NA	False	NA	NA	False	NA	NA	NA	3649547	3649371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_3649400_3649500
Isoform_36204_12	chr12	+	177	1	Intergenic	novelGene_2455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	21144047	21144224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_21144000_21144200
Isoform_36208_33	chr12	-	237	1	Intergenic	novelGene_2456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATCTGCATTTAGAAGC	NA	False	NA	NA	False	TATAAA	-21	NA	21406353	21406116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_21406100_21406400
Isoform_36210_29	chr12	+	171	1	Intergenic	novelGene_2457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTTAAAAAAAGAGAGAGA	2975	False	NA	NA	False	NA	NA	NA	21420854	21421025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_21420900_21421000
Isoform_36217_4	chr12	+	164	1	Intergenic	novelGene_2458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAACAAACAAACAAATAA	NA	False	NA	NA	False	NA	NA	NA	21442718	21442882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_21442700_21442900
Isoform_36219_63	chr12	-	176	1	Intergenic	novelGene_2390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAATCTACTTT	9361	False	NA	NA	False	NA	NA	NA	3681795	3681619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_3681600_3681800
Isoform_36223_175	chr12	-	157	1	Antisense	novelGene_ENSMUSG00000071454.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	3695969	3695812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_3695800_3696000
Isoform_36224_3	chr12	-	2593	1	Intergenic	novelGene_2463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAACTTTTGTACTTGG	NA	False	NA	NA	False	NA	NA	NA	21817683	21815090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_21815100_21817700
Isoform_36229_11	chr12	-	174	1	Intergenic	novelGene_2467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAACAAAACATCG	NA	False	NA	NA	False	NA	NA	NA	22230052	22229878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_22229900_22230100
Isoform_36230_3	chr12	-	3490	1	Intergenic	novelGene_2471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAAAAAATTTCGTACTT	NA	False	NA	NA	False	NA	NA	NA	22302664	22299174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_22299200_22302700
Isoform_36231_5	chr12	+	157	1	Intergenic	novelGene_2476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	23681807	23681964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_23681800_23682000
Isoform_36232_6	chr12	-	176	1	Intergenic	novelGene_2472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAAATTTGAA	5380	False	NA	NA	False	NA	NA	NA	22740326	22740150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_22740200_22740300
Isoform_36234_8	chr12	+	177	1	Intergenic	novelGene_2474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	23057312	23057489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_23057300_23057500
Isoform_36235_8	chr12	-	2760	3	Intergenic	novelGene_2475	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATATATGGTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	23074750	23071934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_23074210_23074245_23074461_23074480
Isoform_36236_13	chr12	-	177	1	Intergenic	novelGene_2466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	22221452	22221275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_22221300_22221500
Isoform_36238_3	chr12	-	178	1	Antisense	novelGene_ENSMUSG00000071454.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAATATAGGCAGT	NA	False	NA	NA	False	NA	NA	NA	3770045	3769867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_3769900_3770000
Isoform_36239_7	chr12	+	158	1	Intergenic	novelGene_2473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	22792740	22792898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_22792700_22792900
Isoform_36241_31	chr12	+	6962	2	Antisense	novelGene_ENSMUSG00000113160.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTTTCCGTGTCGTTAT	NA	False	NA	NA	False	NA	NA	NA	23748086	23916781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_+_23754698_23916430
Isoform_36243_5	chr12	+	3149	1	Intergenic	novelGene_2477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23834508	23837657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_23834500_23837700
Isoform_36245_45	chr12	-	177	1	Intergenic	novelGene_2450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAGCTATATAG	NA	False	NA	NA	False	NA	NA	NA	19436514	19436337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_19436300_19436500
Isoform_36246_10	chr12	+	4189	1	Intergenic	novelGene_2479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTATTCTATTAGC	NA	False	NA	NA	False	NA	NA	NA	23916762	23920951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_23916800_23921000
Isoform_36249_3	chr12	-	158	1	Intergenic	novelGene_2480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	24279794	24279636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_24279600_24279800
Isoform_3625_5	chr10	-	3455	10	FSM	ENSMUSG00000055053.19	ENSMUST00000117966.2	1655	10	193	-1993	193	178	multi-exon	TRUE	canonical	3	13	junction_9	6.76775214792936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTATTTCTATTTGTA	273	False	NA	0	True	AATAAA	-16	NA	81266646	81234793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81266619
Isoform_36250_4	chr12	-	172	1	Intergenic	novelGene_2481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAGAAAATGTATTC	NA	False	NA	NA	False	NA	NA	NA	24626737	24626565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_24626600_24626700
Isoform_36251_870	chr12	-	1061	1	FSM	ENSMUSG00000066553.6	ENSMUST00000140065.2	342	1	-54	-665	-54	665	mono-exon	FALSE	NA	NA	NA	NA	NA	870	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAGATGTTAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	24689063	24688002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_24688000_24689100
Isoform_3626_3	chr10	-	3534	10	FSM	ENSMUSG00000055053.19	ENSMUST00000117966.2	1655	10	114	-1993	114	178	multi-exon	FALSE	canonical	3	13	junction_9	6.76775214792936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTATTTCTATTTGTA	194	False	NA	0	True	AATAAA	-16	NA	81266725	81234793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81266619
Isoform_36260_6	chr12	-	178	1	Intergenic	novelGene_2482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAGCAGG	NA	False	NA	NA	False	NA	NA	NA	24739748	24739570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_24739600_24739700
Isoform_36269_8	chr12	-	365	1	Antisense	novelGene_ENSMUSG00000020649.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAT	3511	False	NA	NA	False	NA	NA	NA	24764093	24763728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr12_-_24763700_24764100
Isoform_36271_9	chr12	+	177	1	Intergenic	novelGene_2483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACTGA	NA	False	NA	NA	False	NA	NA	NA	24799714	24799891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_24799700_24799900
Isoform_36272_9	chr12	+	158	1	Intergenic	novelGene_2484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	24805822	24805980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_24805800_24806000
Isoform_36274_6	chr12	-	178	1	Intergenic	novelGene_2485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCTACACC	NA	False	NA	NA	False	NA	NA	NA	24807999	24807821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_24807800_24808000
Isoform_36276_5	chr12	+	159	1	Intergenic	novelGene_2486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	5584	False	NA	NA	False	NA	NA	NA	24837204	24837363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_24837200_24837400
Isoform_36278_10	chr12	+	176	1	Intergenic	novelGene_2487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGGCAAGAATT	7856	False	NA	NA	False	NA	NA	NA	24839476	24839652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_24839500_24839700
Isoform_36279_7	chr12	+	170	1	Intergenic	novelGene_2488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGACTGAAGTGAGTGG	NA	False	NA	NA	False	NA	NA	NA	24847735	24847905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_24847700_24847900
Isoform_36280_8	chr12	+	165	1	Intergenic	novelGene_2489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACATAGTGCCAC	NA	False	NA	NA	False	NA	NA	NA	24854219	24854384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_24854200_24854400
Isoform_36281_3	chr12	-	175	1	Intergenic	novelGene_2391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	3842789	3842614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_3842600_3842800
Isoform_36282_45	chr12	+	161	1	Intergenic	novelGene_2490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTTTAAAAAAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	24952072	24952233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_24952100_24952200
Isoform_36283_4	chr12	-	175	1	Intergenic	novelGene_2491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	24965995	24965820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_24965800_24966000
Isoform_36285_37	chr12	+	176	1	Intergenic	novelGene_2492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	25071364	25071540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_25071400_25071500
Isoform_36286_17	chr12	-	208	1	Intergenic	novelGene_2493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAATAA	1230	False	NA	NA	False	NA	NA	NA	25099980	25099772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_25099800_25100000
Isoform_36290_38	chr12	-	171	1	Intergenic	novelGene_2494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	25138995	25138824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_25138800_25139000
Isoform_36298_9	chr12	-	2900	1	FSM	ENSMUSG00000063632.7	ENSMUST00000079063.7	8311	1	-129	5540	-129	-5540	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGTGGCGAAGCAGAC	NA	False	NA	NA	False	AATAAA	-23	NA	27392702	27389802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_27389800_27392700
Isoform_36301_19	chr12	-	177	1	Intergenic	novelGene_2495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATATTAAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	28712000	28711823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_28711800_28712000
Isoform_36304_57	chr12	+	167	1	Intergenic	novelGene_2496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAAAGAGATCA	NA	False	NA	NA	False	NA	NA	NA	28737065	28737232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_28737100_28737200
Isoform_36307_5	chr12	-	218	1	Intergenic	novelGene_2497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCAATCAG	NA	False	NA	NA	False	NA	NA	NA	28967640	28967422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_28967400_28967600
Isoform_36308_16	chr12	+	2901	1	Intergenic	novelGene_2498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30631455	30634356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_30631500_30634400
Isoform_36314_6	chr12	+	244	1	Intergenic	novelGene_2499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	AAAAAG	-41	NA	31248605	31248849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_31248600_31248800
Isoform_36316_10	chr12	+	426	1	Intergenic	novelGene_2502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31386833	31387259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_31386800_31387300
Isoform_36317_28	chr1	-	176	1	Intergenic	novelGene_575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	4465	False	NA	NA	False	NA	NA	NA	170757374	170757198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_170757200_170757400
Isoform_36321_17	chr12	-	1084	1	NIC	ENSMUSG00000020659.17	novel	3937	6	NA	NA	27	-11166	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31549527	31548443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_31548400_31549500
Isoform_36322_120	chr12	-	177	1	Intergenic	novelGene_2504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCCAGGAC	NA	False	NA	NA	False	NA	NA	NA	31623278	31623101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_31623100_31623300
Isoform_36323_3	chr12	-	679	1	FSM	ENSMUSG00000020648.4	ENSMUST00000219855.2	296	1	-56	-327	-6	327	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTCACTTA	9054	False	NA	NA	False	AATAAA	-40	NA	31704831	31704152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_-_31704200_31704800
Isoform_36325_3	chr12	-	6461	1	Intergenic	novelGene_2505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTGCAAACTGAATCCAA	NA	False	NA	NA	False	NA	NA	NA	31730293	31723832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_31723800_31730300
Isoform_36326_309	chr12	+	177	1	Intergenic	novelGene_2506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAATAAATCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31745927	31746104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_31745900_31746100
Isoform_36327_28	chr12	+	555	1	ISM	ENSMUSG00000020660.7	ENSMUST00000218089.2	977	3	5071	42	5052	3	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCGGCTCTGATCTTCAA	NA	False	NA	15	True	AATAAA	-16	NA	4010021	4010576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_4010000_4010600
Isoform_36329_10	chr12	-	177	1	Intergenic	novelGene_2507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGCTAAAAAAAAATGTAAAC	NA	False	NA	NA	False	NA	NA	NA	31800643	31800466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_31800500_31800600
Isoform_36330_109	chr12	+	194	1	Intergenic	novelGene_2508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAGTACATGGA	NA	False	NA	NA	False	NA	NA	NA	31801738	31801932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_31801700_31801900
Isoform_36331_6	chr13	+	177	1	Intergenic	novelGene_2958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAGATATCA	NA	False	NA	NA	False	NA	NA	NA	25477511	25477688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_25477500_25477700
Isoform_36334_36	chr12	+	251	1	Intergenic	novelGene_2509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGAGGAATCCCCTGAA	NA	False	NA	NA	False	NA	NA	NA	31850676	31850927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_31850700_31850900
Isoform_36335_12	chr12	-	224	1	Intergenic	novelGene_2392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTATGTGAATAACCAAAT	NA	False	NA	NA	False	NA	NA	NA	4011338	4011114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_4011100_4011300
Isoform_36337_3	chr1	-	176	1	Intergenic	novelGene_607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGAG	4431	False	NA	NA	False	NA	NA	NA	172293567	172293391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_172293400_172293600
Isoform_36338_114	chr14	+	176	1	Intergenic	novelGene_3558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57009904	57010080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_57009900_57010100
Isoform_36339_7	chr12	-	214	1	Intergenic	novelGene_2511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAATAAAAAAAA	281	False	NA	NA	False	NA	NA	NA	31950275	31950061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_31950100_31950300
Isoform_3634_358	chr10	-	2875	14	FSM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	-36	2	-20	-2	multi-exon	FALSE	canonical	3	153	junction_4	76.7224306246012	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTCCAGGTGTCCTG	NA	False	NA	-32	True	AATAAA	-16	NA	81332196	81322292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
Isoform_36341_3	chr12	-	159	1	Intergenic	novelGene_2512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1945	False	NA	NA	False	NA	NA	NA	32121881	32121722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_32121700_32121900
Isoform_36342_9	chr12	+	1807	1	FSM	ENSMUSG00000090946.4	ENSMUST00000172332.4	4240	1	-50	2483	-50	-2483	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCTTGTGATAAAAATTG	NA	False	NA	NA	False	AATAAA	-21	NA	32428652	32430459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_32428700_32430500
Isoform_36343_5	chr12	+	4240	1	FSM	ENSMUSG00000090946.4	ENSMUST00000172332.4	4240	1	-4	4	-4	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTCTGGCTTTTCTAA	NA	False	NA	11	True	AATAAA	-11	NA	32428698	32432938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_32428700_32432900
Isoform_36344_14	chr12	+	1684	1	FSM	ENSMUSG00000090946.4	ENSMUST00000172332.4	4240	1	74	2482	74	-2482	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTTGTGATAAAAATTGA	NA	False	NA	NA	False	AATAAA	-22	NA	32428776	32430460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_32428800_32430500
Isoform_36345_6	chr12	+	4163	1	FSM	ENSMUSG00000090946.4	ENSMUST00000172332.4	4240	1	74	3	74	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGCTTTTCTAAT	NA	False	NA	12	True	AATAAA	-12	NA	32428776	32432939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_32428800_32432900
Isoform_36348_3	chr12	-	473	1	Intergenic	novelGene_2393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7518	False	NA	NA	False	NA	NA	NA	4031413	4030940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_4030900_4031400
Isoform_36351_20	chr12	-	5132	1	Intergenic	novelGene_2513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAAACTAGTATGTAAGC	NA	False	NA	NA	False	NA	NA	NA	32876732	32871600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_32871600_32876700
Isoform_36358_4	chr12	+	173	1	Intergenic	novelGene_2394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACCAGATTTGC	NA	False	NA	NA	False	NA	NA	NA	4092942	4093115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4092900_4093100
Isoform_36359_6	chr12	-	546	1	NIC	ENSMUSG00000019256.18	novel	5548	11	NA	NA	18	-20069	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAATCCTGC	NA	False	NA	NA	False	NA	NA	NA	35585019	35584473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr12_-_35584500_35585000
Isoform_36360_128	chr7	-	177	1	Intergenic	novelGene_10352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATATCTTTTTGT	3432	False	NA	NA	False	NA	NA	NA	126108591	126108414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_126108400_126108600
Isoform_36361_19	chr12	+	177	1	Intergenic	novelGene_2395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTTAGAAA	1364	False	NA	NA	False	NA	NA	NA	4134878	4135055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4134900_4135100
Isoform_36365_16	chr12	+	178	1	Intergenic	novelGene_2396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	4151672	4151850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4151700_4151800
Isoform_36367_31	chrX	+	185	1	Intergenic	novelGene_12150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGAAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	105048252	105048437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_105048300_105048400
Isoform_36368_42	chr12	-	180	1	Intergenic	novelGene_2397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGGAAT	NA	False	NA	NA	False	NA	NA	NA	4165589	4165409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_4165400_4165600
Isoform_36370_5	chr12	+	1097	1	ISM	ENSMUSG00000090387.2	ENSMUST00000164804.2	2299	2	1353	0	1353	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAACAAAAAAAAAAAAAAAA	1824	False	NA	NA	False	NA	NA	NA	40250007	40251104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr12_+_40250000_40251100
Isoform_36372_5	chr12	-	181	1	Intergenic	novelGene_2515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATATGTGCACCAT	NA	False	NA	NA	False	NA	NA	NA	40305486	40305305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_40305300_40305500
Isoform_36374_4	chr12	+	176	1	Intergenic	novelGene_2516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATATGAGGCT	NA	False	NA	NA	False	NA	NA	NA	40340233	40340409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_40340200_40340400
Isoform_36376_150	chr2	-	176	1	Intergenic	novelGene_6081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29599113	29598937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_29598900_29599100
Isoform_36377_4	chr12	-	179	1	Intergenic	novelGene_2518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTATGTGTAATTCTTAA	NA	False	NA	NA	False	NA	NA	NA	40919220	40919041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_40919000_40919200
Isoform_36379_6	chr12	+	265	1	Intergenic	novelGene_2398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCCACATTTAGGGTTG	NA	False	NA	NA	False	AAGAAA	-4	NA	4175210	4175475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4175200_4175500
Isoform_36380_5	chr12	-	3418	1	Intergenic	novelGene_2519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41449155	41445737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_41445700_41449200
Isoform_36381_7	chr12	-	176	1	Intergenic	novelGene_2520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAAAAAAAGAAAATATT	NA	False	NA	NA	False	NA	NA	NA	41670747	41670571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_41670600_41670700
Isoform_36384_22	chr13	-	8423	20	FSM	ENSMUSG00000033799.11	ENSMUST00000096069.5	8338	20	-85	0	-85	0	multi-exon	FALSE	canonical	3	47	junction_10	12.4522356123369	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTCTGTGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	3661193	3616034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649836_3649857_3649938_3650063_3650191_3650335_3660789
Isoform_36386_3	chr13	-	8100	20	NIC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-95	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	17.621442490814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCATTTGTAGTCTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	3661203	3616037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3632081_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649836_3649857_3649938_3650063_3650191_3650335_3660789
Isoform_36396_76	chr13	-	3289	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	36	546	1	126	multi-exon	FALSE	canonical	3	47	junction_9	50.6888353061239	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTCTCTCCTGGTGG	NA	False	NA	-4	True	ATTAAA	-26	NA	3943542	3932563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
Isoform_36399_351	chr13	-	3423	12	FSM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	26	-769	-16	126	multi-exon	FALSE	canonical	3	132	junction_9	26.5501241222916	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTCTCTCCTGGTGG	NA	False	NA	-4	True	ATTAAA	-26	NA	3968194	3932563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
Isoform_36402_95	chr13	-	1283	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	37	2143	-3	-2136	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCTTGACAGAAGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	4659136	4642891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
Isoform_36403_4	chr13	-	1747	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	-25	1741	-25	-1734	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCTGTGTAAAGACACT	NA	False	NA	NA	False	AATAAA	-19	NA	4659198	4642489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
Isoform_36405_15	chr13	-	1313	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	3	2147	3	-2140	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACCTGCTTGACAGA	NA	False	NA	NA	False	ATTAAA	-17	NA	4659170	4642895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
Isoform_36406_16	chr13	-	1685	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	37	1741	-3	-1734	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCTGTGTAAAGACACT	NA	False	NA	NA	False	AATAAA	-19	NA	4659136	4642489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
Isoform_36469_1951	chr13	-	2687	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	52	1406	0	8	multi-exon	FALSE	canonical	3	963	junction_15	143.890705562911	1951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698761	6631209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
Isoform_36470_379	chr13	-	2747	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	-8	1406	-8	8	multi-exon	FALSE	canonical	3	963	junction_15	143.890705562911	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698821	6631209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
Isoform_36473_39	chr13	-	2642	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-21	7	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_21	274.502022841759	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTACTTGGTTTATTG	NA	False	NA	-7	True	ATTAAA	-17	NA	6686707	6631210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6686596
Isoform_36477_39	chr13	-	2594	21	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-8	8	combination_of_known_splicesites	FALSE	canonical	3	40	junction_6	289.380247252642	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698821	6631209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
Isoform_3648_503	chr10	-	2907	14	FSM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	30	181	-20	27	multi-exon	TRUE	canonical	3	251	junction_4	53.9264236863306	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTATTGTGCTGCTGTCCT	NA	False	NA	-3	True	AATAAA	-45	NA	81332196	81322263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
Isoform_36483_6	chr13	-	4611	14	NIC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	82	-1	intron_retention	FALSE	canonical	3	18	junction_13	18.3112472308122	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACTATTATAAAGGTTTG	NA	False	NA	-30	True	ATTAAA	-17	NA	8920933	8853031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
Isoform_36484_69	chr13	-	4494	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	32	0	-5	0	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTATAAAGGTTTGT	NA	False	NA	-29	True	ATTAAA	-18	NA	8921048	8853030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
Isoform_36485_3	chr13	-	4361	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	7	158	7	-158	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTTTTATTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	8921073	8853188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
Isoform_36488_7	chr13	-	1611	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	-23	2192	-2	0	multi-exon	FALSE	canonical	3	80	junction_4	6.36396103067893	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTGTGTATACAGTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	8921082	8902707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
Isoform_36489_16	chr13	-	3770	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	11	-1	-5	1	multi-exon	FALSE	canonical	3	80	junction_4	6.36396103067893	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCTGTTACAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	8921048	8900514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
Isoform_36511_938	chr13	-	2418	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	63	6302	30	-153	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAGTTTGATGACTT	NA	False	NA	-22	True	AGTAAA	-10	NA	9046056	9022668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
Isoform_36512_144	chr13	-	2457	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	24	6302	-9	-153	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAGTTTGATGACTT	NA	False	NA	-22	True	AGTAAA	-10	NA	9046095	9022668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
Isoform_36513_88	chr13	-	2981	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	63	5739	30	410	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTAGTAACTTAATTAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	9046056	9022105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
Isoform_36532_9	chr13	-	4250	15	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	40.2020407645265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACTCTTGTCAGTAAG	NA	False	NA	-4	True	AATAAA	-16	NA	9814994	9734874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
Isoform_36534_5	chr13	-	4143	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	43.1802108869896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACTCTTGTCAGTAAG	NA	False	NA	-4	True	AATAAA	-16	NA	9815214	9734874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
Isoform_36535_9	chr13	-	3962	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110638.8	4003	14	41	0	-3	0	multi-exon	FALSE	canonical	3	27	junction_3	41.8502543239853	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814483	9734871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
Isoform_36536_5	chr13	-	4044	14	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	42.6016362160425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814947	9734871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
Isoform_36537_4	chr13	-	3982	14	NIC	ENSMUSG00000021156.18	novel	3796	14	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	45.6649749899023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGTCAGTAAGC	NA	False	NA	-3	True	AATAAA	-17	NA	9815214	9734873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815090
Isoform_36539_4	chr13	-	2135	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	9	217	combination_of_known_junctions	FALSE	canonical	3	65	junction_14	30.2476175482787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTCAGCAAATTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	9814471	9736680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
Isoform_3654_46	chr10	-	2947	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	345	junction_12	32.4987179234299	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTCCAGGTGTCCTG	NA	False	NA	-32	True	AATAAA	-16	NA	81332196	81322292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
Isoform_36542_17	chr13	-	4081	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110634.8	3824	15	-9	-248	-9	-6	multi-exon	FALSE	canonical	3	58	junction_14	31.2871004259139	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9815001	9734882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
Isoform_36543_15	chr13	-	3943	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	170	4	16	-1	multi-exon	FALSE	canonical	3	34	junction_14	35.3204716033877	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCTTGTCAGTAAGCT	NA	False	NA	-2	True	AATAAA	-18	NA	9815180	9734872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
Isoform_36544_3	chr13	-	4056	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	39.9073544447074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAACAACTCTTGTCAGT	NA	False	NA	-7	True	AATAAA	-13	NA	9815404	9734877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815196
Isoform_36545_3	chr13	-	2003	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	-30	1797	1	229	multi-exon	FALSE	canonical	3	61	junction_11	32.3144681539246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAAACATTTTTAGG	NA	False	NA	NA	False	AATAAA	-31	NA	9814489	9736668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
Isoform_36546_21	chr13	-	3758	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	1	11	1	-6	multi-exon	FALSE	canonical	3	61	junction_11	32.3144681539246	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9814458	9734882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
Isoform_36547_11	chr13	-	3928	14	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_13	33.3849698669589	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCTTGTCAGTAAGCT	NA	False	NA	-2	True	AATAAA	-18	NA	9815000	9734872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
Isoform_36549_10	chr13	-	3819	14	FSM	ENSMUSG00000021156.18	ENSMUST00000062658.15	3796	14	-32	9	15	-6	multi-exon	FALSE	canonical	3	34	junction_13	37.5302639220559	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9815228	9734882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815090
Isoform_36550_4	chr13	-	723	6	ISM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	-28	10840	3	-538	5prime_fragment	FALSE	canonical	3	61	junction_3	47.9357903867246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTCTTTGTAATTCATA	NA	False	NA	-1	True	ATTAAA	-21	NA	9814487	9745711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
Isoform_36555_167	chr13	-	4530	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-65	3829	-47	-3	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAGTTGAATACAAGGA	5896	False	NA	43	True	ATTAAA	-12	NA	12273046	12201426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
Isoform_36557_25	chr13	-	8358	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-64	0	-46	0	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTATGATGACTTTATA	5897	False	NA	0	True	AATAAA	-26	NA	12273045	12197597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
Isoform_36561_4	chr13	+	2812	2	Antisense	novelGene_ENSMUSG00000021311.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGACAGAAGGATTGCT	NA	False	NA	NA	False	NA	NA	NA	12245345	12249973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_12245971_12247786
Isoform_36562_9	chr13	-	2332	14	ISM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-65	47498	-47	-13330	5prime_fragment	FALSE	canonical	3	157	junction_11	11.4395762738593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTTGTATCTGTTGTT	5896	False	NA	NA	False	AGTAAA	-19	NA	12273046	12245095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
Isoform_36564_45	chr13	-	1057	7	ISM	ENSMUSG00000052374.17	ENSMUST00000168193.8	2920	22	61779	-5	3607	-4	3prime_fragment	FALSE	canonical	3	42	junction_5	11.7473401244707	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTTGACAAACTTTAT	NA	False	NA	-1	True	AATAAA	-25	NA	12293826	12284315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679
Isoform_36565_5	chr13	-	2846	19	NIC	ENSMUSG00000052374.17	novel	3013	21	NA	NA	-4	3	intron_retention	TRUE	canonical	0	0	junction_8	25.5724581783596	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACTTTGACAAACTTT	NA	False	NA	-3	True	AATAAA	-23	NA	12355645	12284317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679_12293863_12295314_12295456_12297400_12297510_12303392_12303544_12305559_12305708_12306545_12306777_12309195_12309289_12315820_12315903_12321159_12321248_12323785_12323873_12324480_12324601_12325732_12325848_12355255
Isoform_36566_7	chr13	-	2703	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099820.10	2736	10	42	-9	32	0	multi-exon	FALSE	canonical	0	0	junction_5	22.4152725712726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTCTCTGGAATAGT	NA	False	NA	-11	True	ATTAAA	-20	NA	12476342	12454295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
Isoform_36567_28	chr13	-	2567	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	226	-1	-6	-1	multi-exon	FALSE	canonical	0	0	junction_5	18.5718491337539	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATACTCTCTGGAATAG	NA	False	NA	-12	True	ATTAAA	-19	NA	12476393	12454296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
Isoform_36573_4	chr13	-	2537	9	NIC	ENSMUSG00000057554.14	novel	2792	10	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	25.3118055460293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATACTCTCTGGAATAG	NA	False	NA	-12	True	ATTAAA	-19	NA	12476390	12454296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_12455876_12462027_12462194_12463299_12463389_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
Isoform_36574_27	chr13	-	3200	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-36	-813	-5	-2	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCAACTGGTGCTG	NA	False	NA	NA	False	AATAAA	-44	NA	13568185	13532206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_36579_5	chr13	-	3258	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-94	-813	-34	-2	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCAACTGGTGCTG	NA	False	NA	NA	False	AATAAA	-44	NA	13568243	13532206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_36582_4	chr13	-	1515	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	-52	1508	-42	-512	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATCTGGCTATTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	13568251	13533712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_36583_19	chr13	-	2969	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	0	2	0	-2	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCAACTGGTGCTG	NA	False	NA	NA	False	AATAAA	-44	NA	13568199	13532206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_36589_22	chr13	-	3610	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	25	-1	-4	1	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTGTAGAGTTTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	13568184	13533199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_3659_11	chr10	-	3042	3	NNC	ENSMUSG00000034792.9	novel	1046	2	NA	NA	0	2034	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	38	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATATTAAGCACCTGT	6420	False	NA	NA	False	AATAAA	-17	NA	81344007	81336105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_81336729_81336766_81338940_81343761
Isoform_36591_56	chr13	-	1310	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	25	2299	-4	-2299	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGAAATTTGTCATTC	NA	False	NA	-7	True	AATATA	-40	NA	13568184	13535499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_36597_17	chr13	-	4631	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-3	-994	-3	-2	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCAACTGGTGCTG	NA	False	NA	NA	False	AATAAA	-44	NA	13568212	13532206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_36599_4	chr13	-	3684	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-49	-1	-49	1	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTGTAGAGTTTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	13568258	13533199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_3660_81	chr10	-	1031	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	0	15	0	-8	multi-exon	FALSE	canonical	3	76	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAACAATCAGGGAAC	6420	False	NA	NA	False	AATAAA	-10	NA	81344007	81338154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81338940_81343761
Isoform_36600_4	chr13	-	3192	4	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-5	2221	intron_retention	FALSE	canonical	3	203	junction_3	15.1510909031513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATCTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13568214	13537366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_36603_142	chr13	-	1812	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	37	-5	-5	2	multi-exon	FALSE	canonical	3	97	junction_4	17.0705109399221	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGCCCTTTCTGTTT	NA	False	NA	0	True	AATAAA	-19	NA	14214186	14172531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
Isoform_36606_14	chr13	-	1838	13	FSM	ENSMUSG00000039233.13	ENSMUST00000159239.8	1855	13	18	-1	-7	1	multi-exon	FALSE	canonical	3	105	junction_7	16.4519502390041	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAGGAGAAAACAT	NA	False	NA	NA	False	NA	NA	NA	14214188	14177647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
Isoform_36608_3	chr13	-	804	4	FSM	ENSMUSG00000039233.13	ENSMUST00000160776.2	909	4	-15	120	6	-120	multi-exon	FALSE	canonical	3	140	junction_1	12.4988888395018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAGAAAAAAAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	14214217	14193979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14194473_14202282_14202368_14203860_14203992_14214122
Isoform_36611_7	chr13	-	1286	5	ISM	ENSMUSG00000021302.11	ENSMUST00000222164.2	1340	7	0	1717	0	295	5prime_fragment	FALSE	canonical	3	8	junction_4	116.164484675825	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTAGCTTCTTTCAGT	NA	False	NA	0	True	AATAAA	-24	NA	14237998	14228258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234036_14237790
Isoform_36614_10	chr13	-	1285	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	2	293	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCAGTAGCTTCTTTCA	NA	False	NA	-2	True	AATAAA	-22	NA	14237992	14228260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
Isoform_36616_7	chr13	-	3327	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	-2	198	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	14238005	14226231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
Isoform_36619_40	chr13	-	4173	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	77	-6	-1	6	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATTTGCTCAACTCCG	NA	False	NA	-4	True	TATAAA	-7	NA	14237996	14225237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
Isoform_3662_64	chr10	-	1075	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	-44	15	-44	-8	multi-exon	FALSE	canonical	3	76	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAACAATCAGGGAAC	6376	False	NA	NA	False	AATAAA	-10	NA	81344051	81338154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81338940_81343761
Isoform_36620_74	chr13	-	3196	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	60	988	-10	198	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	14238013	14226231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
Isoform_36626_113	chr13	-	1146	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	79	3019	0	291	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACTCAGTAGCTTCTTT	NA	False	NA	-4	True	AATAAA	-20	NA	14237994	14228262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
Isoform_36632_6	chr13	-	1073	3	FSM	ENSMUSG00000021302.11	ENSMUST00000222687.2	762	3	-19	-292	-10	292	multi-exon	FALSE	canonical	2	3	junction_2	137.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTCAGTAGCTTCTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	14238013	14228261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14229041_14229734_14229806_14237790
Isoform_36635_27	chr13	-	793	3	FSM	ENSMUSG00000015672.5	ENSMUST00000221699.2	1174	3	-6	387	-4	73	multi-exon	FALSE	canonical	3	41	junction_2	520.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATGGATTAATTTGTGT	NA	False	NA	-10	True	AATAAA	-22	NA	14787616	14784884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14785326_14786007_14786190_14787446
Isoform_36636_593	chr13	-	775	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	118	2120	-20	69	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTCAATGGATTAATTT	NA	False	NA	-14	True	AATAAA	-18	NA	14787632	14784888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14785326_14786007_14786190_14787476
Isoform_3664_4	chr10	-	1845	7	FSM	ENSMUSG00000034792.9	ENSMUST00000043709.8	1962	7	109	8	109	-8	multi-exon	FALSE	canonical	0	0	junction_4	27.6083723211315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAACAATCAGGGAAC	5888	False	NA	NA	False	AATAAA	-10	NA	81359950	81338154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81338940_81343761_81343916_81345119_81345250_81347830_81347960_81348244_81348400_81350070_81350256_81359643
Isoform_36641_17	chr13	-	2880	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	129	4	-9	-4	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTATTTTGAGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	14787621	14782772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14785326_14786007_14786190_14787476
Isoform_36643_16	chr13	-	772	3	FSM	ENSMUSG00000015672.5	ENSMUST00000015816.5	658	3	-32	-82	-20	82	multi-exon	FALSE	canonical	3	18	junction_2	532	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTGTGTATTTCTATA	NA	False	NA	-1	True	AATAAA	-31	NA	14787632	14784875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_14785326_14786007_14786190_14787492
Isoform_36645_18	chr13	-	1453	2	NIC	ENSMUSG00000015672.5	novel	3013	3	NA	NA	-8	77	intron_retention	FALSE	canonical	3	1113	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATTAATTTGTGTATTT	NA	False	NA	-6	True	AATAAA	-26	NA	14787620	14784880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_14786190_14787476
Isoform_36648_16	chr13	-	5629	14	FSM	ENSMUSG00000041297.9	ENSMUST00000223490.2	12548	14	-235	7154	-235	-9	multi-exon	FALSE	canonical	3	30	junction_2	13.284773505807	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAAATGGTCAACATT	NA	False	NA	7	True	AATAAA	-32	NA	17979917	17892053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
Isoform_36652_6	chr13	-	5630	14	FSM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-493	65	-47	0	multi-exon	FALSE	canonical	3	33	junction_2	12.8002403823582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAACATTATTTTTGTT	NA	False	NA	16	True	AATAAA	-41	NA	17979729	17892044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_17893497_17893940_17894391_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
Isoform_36653_4	chr13	-	5796	14	FSM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-681	87	-235	-22	multi-exon	FALSE	canonical	3	33	junction_2	12.8002403823582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAACAGTTTTATATAAAA	NA	False	NA	-6	True	AATAAA	-19	NA	17979917	17892066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_17893497_17893940_17894391_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
Isoform_36654_8	chr13	-	5497	14	FSM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-360	65	86	0	multi-exon	FALSE	canonical	3	33	junction_2	12.8002403823582	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAACATTATTTTTGTT	NA	False	NA	16	True	AATAAA	-41	NA	17979596	17892044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_17893497_17893940_17894391_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
Isoform_36666_3	chr13	-	3416	3	FSM	ENSMUSG00000041297.9	ENSMUST00000222848.2	1062	3	-1680	-674	-51	674	multi-exon	FALSE	canonical	3	79	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTAGTCAGTTTCTT	NA	False	NA	NA	False	TATAAA	-13	NA	17979733	17940143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_17941192_17946885_17947543_17978022
Isoform_36667_9	chr13	-	2730	3	FSM	ENSMUSG00000041297.9	ENSMUST00000222848.2	1062	3	-1668	0	-39	0	multi-exon	FALSE	canonical	3	79	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAGTTTGTAATTATTA	NA	False	NA	NA	False	AATAAA	-16	NA	17979721	17940817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_17941192_17946885_17947543_17978022
Isoform_36670_3	chr13	-	2953	3	FSM	ENSMUSG00000041297.9	ENSMUST00000222848.2	1062	3	-1885	-6	-256	6	multi-exon	FALSE	canonical	3	79	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTAATTATTAATTTGG	NA	False	NA	NA	False	AATAAA	-22	NA	17979938	17940811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_17941192_17946885_17947543_17978022
Isoform_36676_286	chr13	-	928	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	19	1741	19	-1741	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGGCTCAATTGACTG	NA	False	NA	-20	True	AATAAA	-21	NA	18118805	18056896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
Isoform_36682_201	chr13	-	2641	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	40	7	40	-7	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTGGTGTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	18118784	18055162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
Isoform_36686_80	chr13	-	3404	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	22	5318	1	2187	multi-exon	FALSE	canonical	3	467	junction_2	27.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACCAGTCAAGACTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	18167912	18161232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_18164368_18166212_18166335_18167765
Isoform_36687_20	chr13	-	4107	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	46	4591	25	2914	multi-exon	FALSE	canonical	3	467	junction_2	27.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTGGTTGTTTTTTGT	NA	False	NA	NA	False	AATAGA	-9	NA	18167888	18160505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_18164368_18166212_18166335_18167765
Isoform_36689_211	chr13	-	1154	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	24	7566	3	-61	multi-exon	FALSE	canonical	3	467	junction_2	27.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTTATGTATTTATGAT	NA	False	NA	NA	False	AATAAA	-21	NA	18167910	18163480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_18164368_18166212_18166335_18167765
Isoform_3669_555	chr10	-	3351	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	56	7	56	-7	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGGCTCCTTTGTGAT	4279	False	NA	-7	True	AATAAA	-12	NA	81380968	81364564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
Isoform_36696_38	chr13	-	1408	10	FSM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	-23	6	-2	-3	multi-exon	FALSE	canonical	3	23	junction_9	324.011659598163	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTGTGTGTTGT	NA	False	NA	-6	True	AATAAA	-13	NA	19579927	19541851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
Isoform_36697_717	chr13	-	1282	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	39	6	-1	-3	multi-exon	FALSE	canonical	3	699	junction_8	60.3857392105123	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTGTGTGTTGT	NA	False	NA	-6	True	AATAAA	-13	NA	19579926	19541851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
Isoform_36698_161	chr13	-	1314	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	7	6	-6	-3	multi-exon	FALSE	canonical	3	699	junction_8	60.3857392105123	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTGTGTGTTGT	NA	False	NA	-6	True	AATAAA	-13	NA	19579958	19541851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
Isoform_36699_27	chr13	-	1403	10	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	323.803705207604	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTGTGTGTTGT	NA	False	NA	-6	True	AATAAA	-13	NA	19579944	19541851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19578101_19578205_19579873
Isoform_36701_15	chr13	-	1395	8	FSM	ENSMUSG00000003062.14	ENSMUST00000199278.3	1074	8	-2	-319	-2	-3	multi-exon	FALSE	canonical	3	699	junction_7	61.3454587245254	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTGTGTGTTGT	NA	False	NA	-6	True	AATAAA	-13	NA	19579927	19541851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
Isoform_36703_37	chr13	-	1157	8	FSM	ENSMUSG00000003062.14	ENSMUST00000200323.3	1128	8	-28	-1	-3	1	multi-exon	FALSE	canonical	3	54	junction_1	267.855352374968	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCATGCCCCTGCTTTG	NA	False	NA	-2	True	AATAAA	-19	NA	19579932	19549124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
Isoform_36705_40	chr13	-	2324	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	22	17	6	-17	multi-exon	FALSE	canonical	3	59	junction_2	5.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATTGGTTATCTTC	NA	False	NA	NA	False	AATAAA	-41	NA	19803952	19775892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_19777519_19778616_19778826_19803463
Isoform_36707_45	chr13	-	2217	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	22	124	6	-124	multi-exon	FALSE	canonical	3	59	junction_2	5.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTATTCTTTGATGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	19803952	19775999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_19777519_19778616_19778826_19803463
Isoform_36712_117	chr13	-	2543	6	FSM	ENSMUSG00000021327.20	ENSMUST00000116434.11	2600	6	49	8	7	-8	multi-exon	FALSE	canonical	3	29	junction_5	29.6486087363303	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCAGCCTGTTGGTTCT	NA	False	NA	-6	True	AATAAA	-15	NA	21586876	21571180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
Isoform_36714_24	chr13	-	2824	6	NIC	ENSMUSG00000021327.20	novel	2561	6	NA	NA	9	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	37.8386046254351	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCAGCCTGTTGGTTCT	NA	False	NA	-6	True	AATAAA	-15	NA	21586874	21571180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586561
Isoform_36718_116	chr13	-	2546	6	FSM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	7	8	7	-8	multi-exon	FALSE	canonical	3	51	junction_5	21.2452347598232	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCAGCCTGTTGGTTCT	NA	False	NA	-6	True	AATAAA	-15	NA	21586876	21571180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
Isoform_3672_187	chr10	-	1475	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	29	1910	29	-347	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTTGAGGTTTTTTT	4252	False	NA	-24	True	NA	NA	NA	81380995	81366467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
Isoform_36720_5	chr13	-	2079	5	FSM	ENSMUSG00000021327.20	ENSMUST00000223831.2	2101	5	21	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_4	45.4477722226294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTTCTTACTTGG	NA	False	NA	1	True	AATAAA	-22	NA	21586880	21571173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21586841
Isoform_36722_5	chr13	-	2663	5	FSM	ENSMUSG00000055313.16	ENSMUST00000239246.2	2642	5	-19	-2	-5	2	multi-exon	FALSE	canonical	1	2	junction_2	3.20156211871642	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCCTCACTTTCAGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	21625233	21606019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21607795_21612437_21612549_21617560_21617713_21618520_21618842_21624929
Isoform_36725_3	chr13	-	4357	6	FSM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	14	-5	14	5	multi-exon	FALSE	canonical	2	8	junction_3	4.81663783151692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGAGGATAGTTAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	21637886	21626344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21630000_21631955_21632065_21632336_21632655_21633443_21633504_21633610_21633687_21637747
Isoform_36726_3	chr13	-	2470	5	NIC	ENSMUSG00000022228.15	novel	4366	6	NA	NA	-12	-1590	intron_retention	FALSE	canonical	3	7	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTATGCAAGAGACTTT	NA	False	NA	NA	False	TATAAA	-14	NA	21637912	21627939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_21630000_21631955_21632065_21633443_21633504_21633610_21633687_21637747
Isoform_36727_3	chr13	-	1586	5	NIC	ENSMUSG00000022228.15	novel	4366	6	NA	NA	-1	-2463	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAAGTGCCTATAGATT	NA	False	NA	NA	False	AATGAA	-16	NA	21637901	21628812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_21630000_21631955_21632065_21633443_21633504_21633610_21633687_21637747
Isoform_36728_3	chr13	-	3988	4	FSM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	-70	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.64098759787715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATTATTGAGGATAGT	NA	False	NA	NA	False	AATAAA	-14	NA	21637900	21626349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21630000_21631955_21632065_21633610_21633687_21637747
Isoform_36731_3	chr13	-	3262	6	FSM	ENSMUSG00000063894.16	ENSMUST00000045228.12	8805	6	39	5504	-8	3105	multi-exon	FALSE	canonical	3	13	junction_1	3.97994974842648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAAGTACTATGATTT	6590	False	NA	NA	False	AATAAA	-18	NA	21715251	21702895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
Isoform_36732_3	chr13	-	1551	5	FSM	ENSMUSG00000006179.10	ENSMUST00000150547.3	1159	5	-19	-373	-19	-5	multi-exon	FALSE	canonical	2	4	junction_2	4.63680924774785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCATTTCTCTCTGCTG	NA	False	NA	NA	False	NA	NA	NA	22190601	22186347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_22186981_22187095_22187242_22187315_22187496_22189260_22189403_22190151
Isoform_36733_3	chr13	-	1635	4	NIC	ENSMUSG00000006179.10	novel	1159	5	NA	NA	-26	-2	intron_retention	FALSE	canonical	3	7	junction_2	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTCTCTCTGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	22190608	22186344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_22186981_22187095_22187496_22189260_22189403_22190151
Isoform_36736_3	chr13	-	2921	5	FSM	ENSMUSG00000046351.12	ENSMUST00000145451.8	1261	5	36	-1696	29	1695	multi-exon	FALSE	canonical	3	23	junction_4	37.5499667110372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAAGTAGGGTGTGGTTT	9049	False	NA	-4	True	AATAAA	-21	NA	23553335	23539505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553026
Isoform_36739_6	chr13	-	4979	5	FSM	ENSMUSG00000046351.12	ENSMUST00000145451.8	1261	5	210	-3928	9	-1	multi-exon	FALSE	canonical	3	23	junction_4	37.5499667110372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTCCACTATACT	9223	False	NA	-1	True	AATAAA	-21	NA	23553161	23537273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553026
Isoform_3674_20	chr10	-	1850	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	28	1536	28	27	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCAGCCAGGTGACAC	4251	False	NA	NA	False	AAGAAA	-22	NA	81380996	81366093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
Isoform_36740_66	chr13	-	2683	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-6	-1862	1	1700	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGGTGTGGTTTATTGT	9014	False	NA	1	True	AATAAA	-26	NA	23553370	23539500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
Isoform_36744_62	chr13	-	4916	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-12	-4089	2	-1	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTCCACTATACT	9008	False	NA	-1	True	AATAAA	-21	NA	23553376	23537273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
Isoform_36746_3	chr13	-	2657	4	FSM	ENSMUSG00000046351.12	ENSMUST00000152557.8	986	4	17	-1688	17	1688	multi-exon	FALSE	canonical	3	23	junction_3	48.1940521918075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTGTATAAGTAGGGT	9231	False	NA	-11	True	AATAAA	-14	NA	23553153	23539512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553026
Isoform_36748_24	chr13	-	2602	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	2	2240	2	1688	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTGTATAAGTAGGGT	9008	False	NA	-11	True	AATAAA	-14	NA	23553376	23539512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
Isoform_36750_16	chr13	-	4831	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	8	5	1	-5	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTTTGTCTCCACTA	9014	False	NA	-5	True	AATAAA	-17	NA	23553370	23537277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
Isoform_36751_3	chr13	-	2869	6	NNC	ENSMUSG00000046351.12	novel	1261	5	NA	NA	21	1699	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	48.6028805730689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGGGTGTGGTTTATTG	9235	False	NA	0	True	AATAAA	-25	NA	23553149	23539501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_23541884_23543467_23543598_23546749_23546825_23546972_23547046_23552289_23552376_23553026
Isoform_36752_4	chr13	-	2810	6	NNC	ENSMUSG00000046351.12	novel	815	5	NA	NA	0	1689	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	51.1366795949835	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTATAAGTAGGGTG	9006	False	NA	-10	True	AATAAA	-15	NA	23553378	23539511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_23541884_23543467_23543598_23546749_23546825_23546972_23547046_23552289_23552376_23553304
Isoform_36754_444	chr13	-	1276	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	-2	3182	-2	-3182	multi-exon	FALSE	canonical	3	221	junction_1	5.5	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTTTAGTTTTTCAT	NA	False	NA	-21	True	AATAAA	-17	NA	23608038	23605712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23606506_23606652_23606853_23607755
Isoform_36756_11	chr13	-	5300	37	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_10	17.5664523143855	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGACTTCTTCCAGTT	NA	False	NA	-1	True	AATAAA	-16	NA	24464927	24196466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
Isoform_36757_7	chr13	-	5331	37	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-178	2	combination_of_known_junctions	FALSE	canonical	3	145	junction_10	17.5664523143855	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGACTTCTTCCAGTTCT	NA	False	NA	1	True	AATAAA	-18	NA	24464956	24196464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
Isoform_36758_9	chr13	-	5234	36	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-223	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	32.6455797551678	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGACTTCTTCCAGTTC	NA	False	NA	0	True	AATAAA	-17	NA	24465001	24196465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_24197444_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
Isoform_36761_14	chr13	-	981	7	FSM	ENSMUSG00000006715.12	ENSMUST00000175689.8	723	7	-13	-245	-13	-1	multi-exon	FALSE	canonical	3	19	junction_6	596.377513735125	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGTGGAGAATTAAGTG	NA	False	NA	-9	True	AATAAA	-25	NA	24945472	24935828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945342
Isoform_36762_1003	chr13	-	977	7	FSM	ENSMUSG00000006715.12	ENSMUST00000110382.9	963	7	-15	1	-15	-1	multi-exon	FALSE	canonical	3	1483	junction_6	81.6382603658086	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGTGGAGAATTAAGTG	NA	False	NA	-9	True	AATAAA	-25	NA	24945921	24935828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
Isoform_36770_77	chr13	-	692	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	25	4	25	-4	multi-exon	FALSE	canonical	3	260	junction_1	3	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTAAGGAAGTATTTT	4842	False	NA	-7	True	AATAAA	-15	NA	25015475	25001934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_25002175_25004697_25004883_25015208
Isoform_36773_30	chr13	-	5633	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	2	12	2	-12	multi-exon	FALSE	canonical	3	44	junction_1	4.49965705140369	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGGGTTAAAGTGAGT	NA	False	NA	-11	True	AATAAA	-19	NA	25121642	25091573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
Isoform_36774_61	chr13	-	1690	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	21	3936	21	-3936	multi-exon	FALSE	canonical	3	44	junction_1	4.49965705140369	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCATCCATTTTTTACA	NA	False	NA	-1	True	AATAAA	-21	NA	25121623	25095497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
Isoform_36779_146	chr13	-	1513	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	66	5456	66	677	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTTTGAGACTAAGAAGA	NA	False	NA	-4	True	ACTAAA	-45	NA	25204296	25176921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
Isoform_36783_46	chr13	-	6989	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	39	7	39	-7	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGCAGTCTGGACAT	NA	False	NA	-6	True	AATAAA	-10	NA	25204323	25171472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
Isoform_36787_3	chr13	-	6844	10	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	66	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	64.9679883186546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGCAGTCTGGACAT	NA	False	NA	-6	True	AATAAA	-10	NA	25204296	25171472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_25177172_25177652_25177767_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
Isoform_36788_398	chr13	-	2606	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	18	5	1	-5	multi-exon	FALSE	canonical	3	147	junction_3	17.6728291138937	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACACTGTGTTTATTGG	NA	False	NA	NA	False	AATAAA	-18	NA	30039639	29509288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
Isoform_36790_5	chr13	-	2565	15	NIC	ENSMUSG00000006191.18	novel	2629	16	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	2	2	junction_14	46.7788980858084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACACTGTGTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	30039643	29509289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30039545
Isoform_36792_8	chr13	-	2552	15	NIC	ENSMUSG00000006191.18	novel	2629	16	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	48.9583850774079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGTGTTTATTGGAC	NA	False	NA	NA	False	AATAAA	-20	NA	30039646	29509286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_29510212_29538612_29538778_29541482_29541567_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
Isoform_36799_9	chr13	-	1739	6	FSM	ENSMUSG00000006191.18	ENSMUST00000129231.2	694	6	-9	-1036	0	1036	multi-exon	FALSE	canonical	3	9	junction_1	95.4136258612993	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTATAGAAATGTG	NA	False	NA	NA	False	AATAAA	-13	NA	30039657	30019941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_30021054_30022497_30022686_30030210_30030324_30033921_30034092_30038880_30038925_30039545
Isoform_36803_5	chr13	-	1873	7	NIC	ENSMUSG00000016477.19	novel	5097	7	NA	NA	10	-3196	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	40.4790755274321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGATGAATTAATTT	NA	False	NA	NA	False	AGTAAA	-17	NA	30170036	30093753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102761_30104096_30104209_30169282
Isoform_36807_15	chr13	-	4690	7	FSM	ENSMUSG00000016477.19	ENSMUST00000221536.2	4597	7	-95	2	-95	-2	multi-exon	FALSE	canonical	3	13	junction_6	42.1689722689826	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTGTGGATGGATTTT	NA	False	NA	-5	True	AATAAA	-45	NA	30168469	30090559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30168110
Isoform_36808_176	chr13	-	5088	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	9	0	9	0	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTGGATGGATTTTCT	NA	False	NA	-3	True	AATAAA	-22	NA	30170037	30090557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
Isoform_36811_6	chr13	-	1854	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	-35	3278	-35	-3278	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAAACGTGTATCGCAG	NA	False	NA	NA	False	TATAAA	-22	NA	30170081	30093835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
Isoform_36816_1095	chr13	-	1173	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	46	144	46	-144	multi-exon	FALSE	canonical	3	2063	junction_1	0	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTTCTCATCTAAATT	NA	False	NA	-15	True	AATAAA	-19	NA	30729299	30724434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_30725325_30729016
Isoform_36819_92	chr13	-	1315	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	46	2	46	-2	multi-exon	FALSE	canonical	3	2063	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTATTATTTTGTTG	NA	False	NA	-4	True	ATTAAA	-17	NA	30729299	30724292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_30725325_30729016
Isoform_36837_22	chr13	-	4287	29	NIC	ENSMUSG00000021357.15	novel	4375	29	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_28	35.6224533640437	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTTGTGTCTTCA	NA	False	NA	-2	True	AATAAA	-20	NA	31158009	30997901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31157978
Isoform_36838_8	chr13	-	4353	29	NIC	ENSMUSG00000021357.15	novel	4375	29	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	3	18	junction_28	35.6224533640437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTGTGTTTGTGTCT	NA	False	NA	-5	True	AATAAA	-17	NA	31158078	30997904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31157978
Isoform_36839_198	chr13	-	4242	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	13	1	13	-1	multi-exon	FALSE	canonical	3	102	junction_19	19.2909994862811	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGTTTGTGTCTTC	NA	False	NA	-3	True	AATAAA	-19	NA	31158024	30997902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
Isoform_36840_32	chr13	-	3102	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	-28	1182	11	-1182	multi-exon	FALSE	canonical	3	102	junction_19	19.2909994862811	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGTCCTGAAAGGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	31158065	30999083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
Isoform_36842_78	chr13	-	1670	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	39	4	39	-4	multi-exon	FALSE	canonical	3	65	junction_5	9.43186089804128	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACAGAGTTTGCTGTGTA	NA	False	NA	-8	True	ATTAAA	-22	NA	32522684	32003565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
Isoform_36845_18	chr13	-	1712	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	-6	7	-6	-7	multi-exon	FALSE	canonical	3	65	junction_5	9.43186089804128	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAACAGAGTTTGCTGT	NA	False	NA	-11	True	ATTAAA	-19	NA	32522729	32003568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
Isoform_36847_184	chr13	-	1296	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	5	617	5	-617	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTTTTGTATGTTC	4874	False	NA	0	True	AATAAA	-18	NA	33035163	33026691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
Isoform_36848_14	chr13	-	1920	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	5	-7	5	7	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAATAAATTGGTTATTT	4874	False	NA	NA	False	AATAAA	-32	NA	33035163	33026067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
Isoform_3685_10	chr10	-	1761	11	NIC	ENSMUSG00000034758.13	novel	1972	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_8	22.2405035914208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433197	81426738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81433129
Isoform_36850_730	chr13	-	1390	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-65	0	-65	0	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGAACCGAGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	34089218	34063798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
Isoform_36851_57	chr13	-	3992	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-65	-2602	-65	2602	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTGCTCTTTTCTGCT	NA	False	NA	0	True	NA	NA	NA	34089218	34061196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
Isoform_36857_40	chr13	-	1350	7	FSM	ENSMUSG00000052180.16	ENSMUST00000172184.2	1327	7	-16	-7	-16	6	multi-exon	FALSE	canonical	3	68	junction_6	317.289431486984	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGAGTGTTTTCTAGGA	NA	False	NA	-1	True	AATAAA	-25	NA	34089707	34063792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089625
Isoform_3686_9	chr10	-	1959	14	FSM	ENSMUSG00000034758.13	ENSMUST00000142948.8	1961	14	2	0	2	0	multi-exon	FALSE	canonical	2	14	junction_8	19.8357158000858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81436707	81426737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
Isoform_36863_51	chr13	-	1203	6	NIC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	94	junction_5	331.741827329627	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGAACCGAGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	34089206	34063798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34089090
Isoform_36868_67	chr13	-	1495	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	145.701464188479	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8653	False	NA	-7	True	AATAAA	-19	NA	34119785	34101909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119551
Isoform_3687_3	chr10	-	1936	14	NIC	ENSMUSG00000034758.13	novel	1961	14	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	23.7668657026004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81436865	81426737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436812
Isoform_36870_13	chr13	-	1544	8	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	174.090991924877	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8477	False	NA	-7	True	AATAAA	-19	NA	34119961	34101909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119551_34119778_34119904
Isoform_36871_23	chr13	-	1539	7	ISM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	233	9	-2	0	3prime_fragment	FALSE	canonical	0	0	junction_6	156.4210841145	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8605	False	NA	-7	True	AATAAA	-19	NA	34119833	34101909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555
Isoform_36874_9	chr13	-	1543	8	FSM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	102	9	-3	0	multi-exon	FALSE	canonical	0	0	junction_6	180.800939134278	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8474	False	NA	-7	True	AATAAA	-19	NA	34119964	34101909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555_34119778_34119904
Isoform_36875_15	chr13	-	1494	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	152.257092518615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8604	False	NA	-7	True	AATAAA	-19	NA	34119834	34101909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119601
Isoform_36876_14	chr13	-	1490	7	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	140	1	-8	-1	3prime_fragment	FALSE	canonical	3	43	junction_6	141.587134537947	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGAACTGTCTGTCT	8599	False	NA	-8	True	AATAAA	-18	NA	34119839	34101910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119609
Isoform_36877_42	chr13	-	1346	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	142.613697331872	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8604	False	NA	-7	True	AATAAA	-19	NA	34119834	34101909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119749
Isoform_36879_180	chr13	-	1318	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	220	9	0	0	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8477	False	NA	-7	True	AATAAA	-19	NA	34119961	34101909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
Isoform_3688_35	chr10	-	1772	11	NIC	ENSMUSG00000034758.13	novel	1855	11	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_10	15.7445228571716	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81433177	81426737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433129
Isoform_36880_23	chr13	-	1425	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	113	9	-2	0	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8370	False	NA	-7	True	AATAAA	-19	NA	34120068	34101909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
Isoform_36881_7	chr13	-	1476	8	FSM	ENSMUSG00000060147.16	ENSMUST00000076532.14	1504	8	25	3	1	-3	multi-exon	FALSE	canonical	3	10	junction_7	178.591998815222	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTCTGTCTGCCTCAC	NA	False	NA	-1	True	AATAAA	-25	NA	34186752	34101903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34180225_34180335_34186652
Isoform_36885_565	chr13	-	1601	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	1	8	1	-8	multi-exon	FALSE	canonical	3	289	junction_2	19.2006944318862	565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTATGGTCCTTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	34261989	34258264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
Isoform_3689_45	chr10	-	1989	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	27	-1	2	0	multi-exon	FALSE	canonical	3	36	junction_10	15.2183321404185	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81436707	81426737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
Isoform_36891_48	chr13	-	1934	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	248	0	-248	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTTATTGAGAGTGT	NA	False	NA	-1	True	AAGAAA	-31	NA	34314337	34310978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
Isoform_36892_198	chr13	-	1836	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	-130	476	-18	-476	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGGTGTCCTCTTTTCTT	NA	False	NA	-3	True	CATAAA	-12	NA	34314467	34311206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
Isoform_36893_1341	chr13	-	1708	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	474	0	-474	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTGTCCTCTTTTCTTTC	NA	False	NA	-1	True	CATAAA	-14	NA	34314337	34311204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
Isoform_36894_19	chr13	-	2437	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	-255	0	255	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTTATTCCATTCTTA	NA	False	NA	NA	False	AATAGA	-19	NA	34314337	34310475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
Isoform_36895_19	chr13	-	2719	5	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	10	590	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	204.295741512152	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34314327	34310140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_34310273_34310315_34312515_34312854_34312966_34313228_34313338_34314159
Isoform_3690_5	chr10	-	1972	14	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_13	20.5406221853992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436872	81426738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436812
Isoform_36906_17	chr13	-	5828	10	FSM	ENSMUSG00000038267.16	ENSMUST00000148390.3	5496	10	-819	487	-88	-487	multi-exon	FALSE	canonical	3	13	junction_3	4.97648792812415	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATTTCCTCTGGAATG	NA	False	NA	NA	False	AATAAA	-15	NA	34529253	34363627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140_34489245_34528141
Isoform_36908_5	chr13	-	6244	10	FSM	ENSMUSG00000038267.16	ENSMUST00000148390.3	5496	10	-761	13	-30	-13	multi-exon	FALSE	canonical	3	13	junction_3	4.97648792812415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTCTCTCCATAGCTG	NA	False	NA	1	True	AATAAA	-13	NA	34529195	34363153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140_34489245_34528141
Isoform_36909_4	chr13	-	1792	5	FSM	ENSMUSG00000038267.16	ENSMUST00000143353.2	503	5	-1054	-235	-75	235	multi-exon	FALSE	canonical	0	0	junction_1	9.86154146165801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCATTCTCATATATTCA	NA	False	NA	NA	False	NA	NA	NA	34529240	34405117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34405383_34405885_34406055_34482979_34483135_34489140_34489245_34528141
Isoform_3691_4	chr10	-	2024	14	NNC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	21.9426363489173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81436637	81426737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436526
Isoform_36910_8	chr13	-	1871	5	FSM	ENSMUSG00000021411.17	ENSMUST00000053459.15	2684	5	807	6	2	0	multi-exon	FALSE	canonical	2	3	junction_4	2.06155281280883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGAGAGGATGTTTGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	34836662	34811822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34812872_34814333_34814446_34822147_34822266_34822989_34823082_34836162
Isoform_36911_4	chr13	-	2275	5	FSM	ENSMUSG00000021411.17	ENSMUST00000053459.15	2684	5	401	8	401	-1	multi-exon	FALSE	canonical	2	3	junction_4	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAGAGAGGATGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	34837068	34811824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_34812872_34814333_34814446_34822147_34822266_34822989_34823082_34836162
Isoform_36912_3	chr13	-	1302	9	FSM	ENSMUSG00000021416.12	ENSMUST00000021853.12	1347	9	-136	181	-136	-181	multi-exon	FALSE	canonical	2	6	junction_1	1.69096865730859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACAAAGCCTTATGAG	NA	False	NA	NA	False	AATAAA	-8	NA	35147929	35130777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_35131074_35132054_35132199_35132727_35132818_35136963_35137085_35138064_35138165_35140843_35140914_35143856_35144046_35144383_35144483_35147736
Isoform_36913_7	chr13	-	1194	9	FSM	ENSMUSG00000021416.12	ENSMUST00000021853.12	1347	9	-25	178	-25	-178	multi-exon	TRUE	canonical	2	6	junction_1	1.69096865730859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGCCTTATGAGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	35147818	35130774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_35131074_35132054_35132199_35132727_35132818_35136963_35137085_35138064_35138165_35140843_35140914_35143856_35144046_35144383_35144483_35147736
Isoform_36915_24	chr13	-	1527	10	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	45	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	52.8942574306115	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGCCTTAAGAATTCA	NA	False	NA	NA	False	AATAAA	-11	NA	35178060	35161736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177812
Isoform_36916_16	chr13	-	1401	10	FSM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	1	-7	1	0	multi-exon	FALSE	canonical	3	29	junction_9	51.0630208542878	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178114	35161732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
Isoform_36918_36	chr13	-	1601	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	145	0	-4	0	multi-exon	TRUE	canonical	3	47	junction_9	45.5959170795038	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAAGAATTCATGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	35178119	35161731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
Isoform_36919_74	chr13	-	1385	10	FSM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	35	6	13	3	multi-exon	FALSE	canonical	3	71	junction_9	38.39206450927	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGCCTTAAGAATTCA	NA	False	NA	NA	False	AATAAA	-11	NA	35178092	35161736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
Isoform_3692_4	chr10	-	2093	14	NNC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	21.9426363489173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436707	81426738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436526
Isoform_36920_15	chr13	-	1693	10	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	56.5674512702303	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178114	35161732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177812
Isoform_36923_19	chr13	-	1515	10	NIC	ENSMUSG00000021417.16	novel	1414	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	51.9781530555072	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178120	35161732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177996
Isoform_36924_3	chr13	-	2887	10	NNC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	45	0	intron_retention	FALSE	canonical	2	6	junction_6	67.9227956789141	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178060	35161732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35173682_35174163_35174353_35174700_35174800_35177050_35177214_35177812
Isoform_36925_3	chr13	-	2747	10	NNC	ENSMUSG00000021417.16	novel	1426	10	NA	NA	-2	3	intron_retention	FALSE	canonical	2	6	junction_6	64.1862644434919	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGCCTTAAGAATTCA	NA	False	NA	NA	False	AATAAA	-11	NA	35178108	35161736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35173682_35174163_35174353_35174700_35174800_35177050_35177214_35177996
Isoform_36926_353	chr13	-	1133	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	15	3232	0	0	multi-exon	FALSE	canonical	3	464	junction_5	45.6195446836425	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36090327	36080686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
Isoform_36927_6	chr13	-	2723	7	NIC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	512	junction_4	31.4624997240984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36090338	36080686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36087740_36088401_36088547_36090186
Isoform_36928_4	chr13	-	3951	5	NIC	ENSMUSG00000021418.16	novel	1053	7	NA	NA	0	-4	intron_retention	FALSE	canonical	3	532	junction_3	22.8637267303474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACACCTTGCTTGTTTGT	NA	False	NA	-10	True	CATAAA	-19	NA	36090327	36080690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36088547_36090186
Isoform_36929_215	chr13	-	1038	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	-16	1064	-16	-1064	multi-exon	FALSE	canonical	3	325	junction_1	9.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCATTTATTTCCTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	36301525	36163441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_36163891_36276788_36276910_36301057
Isoform_3693_6	chr10	-	2278	13	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	36	junction_9	15.8348683466442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81436707	81426737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
Isoform_36933_5	chr13	-	1715	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	-31	402	-31	-402	multi-exon	FALSE	canonical	3	325	junction_1	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGACTCTGGTGATCAG	NA	False	NA	NA	False	AATAAA	-22	NA	36301540	36162779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_36163891_36276788_36276910_36301057
Isoform_36934_3	chr13	-	584	4	NNC	ENSMUSG00000100760.2	novel	526	3	NA	NA	1868	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.24721912892465	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTGAGTCTGTTTACTG	NA	False	NA	NA	False	NA	NA	NA	37617257	37605808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_37606132_37613995_37614157_37615394_37615464_37617226
Isoform_3694_4	chr10	-	2998	9	NIC	ENSMUSG00000034758.13	novel	1855	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_8	16.8133131773604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81433179	81426737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433129
Isoform_36941_334	chr13	-	2672	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	49	6612	-11	-6612	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATAGTGTTTAACTAAAAA	5895	False	NA	-1	True	ATTAAA	-14	NA	38178144	38161988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_36942_1047	chr13	-	2492	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	46	6795	-14	-6795	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGCTGTATAATCTGTT	5892	False	NA	-44	True	AATATA	-17	NA	38178147	38162171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_36945_134	chr13	-	4695	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	46	4592	-14	-4592	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTGGCAGTGTGTGG	5892	False	NA	-8	True	ATTAAA	-18	NA	38178147	38159968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_36946_161	chr13	-	3059	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	52	6222	-8	-6222	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTTTTCAGAATTTAT	5898	False	NA	0	True	AATATA	-17	NA	38178141	38161598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_36948_75	chr13	-	2532	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	5	6796	5	-6796	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCTGTATAATCTGT	5851	False	NA	-45	True	AATATA	-16	NA	38178188	38162172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_36955_22	chr13	-	2737	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	-15	6611	-15	-6611	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGTTTAACTAAAAAC	5831	False	NA	0	True	ATTAAA	-15	NA	38178208	38161987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_3696_13	chr10	-	1346	9	NIC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	72.0017360901805	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9874	False	NA	-11	True	AATAAA	-25	NA	81463415	81457620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81457913_81458241_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
Isoform_3697_5	chr10	-	1737	7	ISM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	1006	2	466	-2	3prime_fragment	FALSE	canonical	3	197	junction_1	19.2353840616713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGTTACATTTATG	1832	False	NA	-13	True	AATAAA	-23	NA	81462625	81457622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323
Isoform_36973_4273	chr13	-	2610	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	34	199	34	-1	multi-exon	FALSE	canonical	3	973	junction_6	103.236992125933	4273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAAAAAGTCTGGTC	NA	False	NA	NA	False	AATAAA	-12	NA	38712432	38684253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
Isoform_36982_52	chr13	-	1723	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	46	3865	-2	-3865	multi-exon	FALSE	canonical	3	63	junction_3	8.98262211161084	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATAAGTATTTGAGATT	NA	False	NA	-28	True	ATTAAA	-15	NA	38819039	38786681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
Isoform_36983_4	chr13	-	1717	4	NIC	ENSMUSG00000038982.11	novel	5634	5	NA	NA	-7	-3865	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	34.6538437823121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATAAGTATTTGAGATT	NA	False	NA	-28	True	ATTAAA	-15	NA	38819092	38786681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_38788005_38803065_38803196_38814968_38815052_38818911
Isoform_36987_25	chr13	-	1069	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	-6	1490	-6	-1490	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAACTTTTGTTTGTT	NA	False	NA	-9	True	AGTAAA	-11	NA	38843040	38829672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
Isoform_3699_16	chr10	-	2013	8	NIC	ENSMUSG00000034748.17	novel	1667	9	NA	NA	-27	-8	intron_retention	FALSE	canonical	3	27	junction_7	72.5548349983146	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTACATTTTGTTACA	9682	False	NA	-19	True	AATAAA	-17	NA	81463181	81457628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81462725
Isoform_36991_5	chr13	-	1950	3	NIC	ENSMUSG00000001707.9	novel	2553	4	NA	NA	12	-1491	intron_retention	FALSE	canonical	3	1400	junction_2	45	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAACTTTTGTTTGT	NA	False	NA	-10	True	AGTAAA	-10	NA	38842974	38829673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_38830287_38838971_38840217_38842882
Isoform_36993_13	chr13	-	1938	10	FSM	ENSMUSG00000021432.16	ENSMUST00000225432.2	2216	10	277	1	-10	-1	multi-exon	FALSE	canonical	3	16	junction_6	14.9004929904357	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCAAGGTGGGAAGAA	NA	False	NA	NA	False	AATAAA	-14	NA	39144523	39116116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144407
Isoform_36999_5	chr13	-	3418	8	NIC	ENSMUSG00000021432.16	novel	1701	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	39	junction_5	8.54280936441489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39144504	39116283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139624_39139913_39144407
Isoform_37000_4	chr13	-	2726	4	ISM	ENSMUSG00000021362.8	ENSMUST00000021791.8	3073	5	4313	-3	-187	2	3prime_fragment	FALSE	canonical	3	9	junction_3	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATCTCTTCAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	41259346	41254900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_41257166_41258044_41258171_41258886_41259000_41259124
Isoform_37002_9	chr13	-	3993	8	FSM	ENSMUSG00000021364.17	ENSMUST00000117096.2	3797	8	-195	-1	48	1	multi-exon	FALSE	canonical	1	1	junction_7	22.3533771360785	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTTGCAACTTTTCT	7607	False	NA	NA	False	AATAAA	-16	NA	41373833	41335973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373512
Isoform_37003_38	chr13	-	3715	9	NNC	ENSMUSG00000021364.17	novel	3840	8	NA	NA	-27	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.2746180929294	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTTGCAACTTTTCT	7532	False	NA	NA	False	AATAAA	-16	NA	41373908	41335973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_41337674_41337708_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
Isoform_37004_70	chr13	-	3722	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	1	117	1	1	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTTGCAACTTTTCT	7560	False	NA	NA	False	AATAAA	-16	NA	41373880	41335973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
Isoform_37006_12	chr13	-	3906	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	-65	-1	-65	1	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGATTCTTAATTCAT	7494	False	NA	NA	False	AATAAA	-19	NA	41373946	41335855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
Isoform_37007_4	chr13	-	3851	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	-129	118	-129	0	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTTGCAACTTTTC	7430	False	NA	NA	False	AATAAA	-15	NA	41374010	41335974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
Isoform_37008_5	chr13	-	3906	9	NNC	ENSMUSG00000021364.17	novel	3840	8	NA	NA	-218	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.2746180929294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTTGCAACTTTTCT	7341	False	NA	NA	False	AATAAA	-16	NA	41374099	41335973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_41337674_41337708_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
Isoform_3701_212	chr10	-	1674	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	216	1	-15	-1	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTACATTTATGT	9874	False	NA	-12	True	AATAAA	-24	NA	81463415	81457621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
Isoform_37010_11	chr13	-	1104	7	FSM	ENSMUSG00000058022.15	ENSMUST00000121404.8	1602	7	75	423	7	2	multi-exon	FALSE	canonical	3	17	junction_6	3.97562014729219	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACATCTCCTGTTACTTT	NA	False	NA	-1	True	TATAAA	-38	NA	42001085	41918031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_41918269_41920811_41920964_41930983_41931100_41967690_41967793_41969613_41969749_41981618_41981862_42000966
Isoform_37011_150	chr13	-	1177	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	66	3	-30	1	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTGGCGTGGCCATG	NA	False	NA	-20	True	AGTAAA	-13	NA	43324894	43305218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
Isoform_37012_129	chr13	-	1228	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	15	3	1	1	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTGGCGTGGCCATG	NA	False	NA	-20	True	AGTAAA	-13	NA	43324945	43305218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
Isoform_37013_13	chr13	-	1225	8	FSM	ENSMUSG00000021368.16	ENSMUST00000021797.9	1239	8	15	-1	-2	1	multi-exon	FALSE	canonical	1	7	junction_7	94.4833426632246	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTGGCGTGGCCATG	NA	False	NA	-20	True	AGTAAA	-13	NA	43324962	43305218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324804
Isoform_37015_4	chr13	-	2317	7	NIC	ENSMUSG00000021368.16	novel	1246	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	148	junction_6	49.8754003047149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCTGGCGTGGCCAT	NA	False	NA	-21	True	AGTAAA	-12	NA	43324946	43305219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
Isoform_37018_113	chr13	-	3373	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-2	0	-2	0	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTCAGTTGAATTT	NA	False	NA	-1	True	ATTAAA	-17	NA	43634760	43556150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
Isoform_37019_39	chr13	-	3593	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-222	0	-222	0	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTCAGTTGAATTT	NA	False	NA	-1	True	ATTAAA	-17	NA	43634980	43556150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
Isoform_3702_7	chr10	-	1705	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	185	1	-46	-1	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTACATTTATGT	9843	False	NA	-12	True	AATAAA	-24	NA	81463446	81457621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
Isoform_37020_48	chr13	-	3401	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-32	2	-32	-2	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTAGTGTCAGTTGAAT	NA	False	NA	-3	True	ATTAAA	-15	NA	43634790	43556152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
Isoform_37026_27	chr13	-	3617	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-246	0	-246	0	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTCAGTTGAATTT	NA	False	NA	-1	True	ATTAAA	-17	NA	43635004	43556150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
Isoform_37028_5	chr13	-	2139	11	ISM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-2	11263	-2	5641	5prime_fragment	FALSE	canonical	3	178	junction_9	17.9858277540957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTATGTTTTTACTTGG	NA	False	NA	NA	False	AATAAA	-14	NA	43634760	43567413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
Isoform_3703_4	chr10	-	1710	8	NNC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	12	0	intron_retention	FALSE	canonical	1	2	junction_6	79.6005332768517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9901	False	NA	-11	True	AATAAA	-25	NA	81463388	81457620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462261_81462452_81463305
Isoform_37030_74	chr13	-	4312	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	9	18	9	-18	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTTCTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-11	NA	43713628	43691886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
Isoform_37031_114	chr13	-	1068	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	5	3266	5	40	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTTTCATTGTTTTG	NA	False	NA	-11	True	AATAAA	-12	NA	43713632	43695134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
Isoform_37032_21	chr13	-	1117	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	-44	3266	-14	40	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTTTCATTGTTTTG	NA	False	NA	-11	True	AATAAA	-12	NA	43713681	43695134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
Isoform_37036_3	chr13	-	4417	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	-78	0	-48	0	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGTACAGTGTTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	43713715	43691868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
Isoform_37037_472	chr13	-	1317	10	FSM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	43	2	-8	-2	multi-exon	FALSE	canonical	3	444	junction_2	46.8187996428785	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTGCAGCTGGTGAG	NA	False	NA	NA	False	AATAAA	-13	NA	45155580	45075556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
Isoform_3704_7	chr10	-	2151	4	FSM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	-28	1	-28	-1	multi-exon	FALSE	canonical	2	18	junction_1	59.275252471462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTTATTTATGTTGT	NA	False	NA	NA	False	NA	NA	NA	82077142	82060688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82062428_82063278_82063426_82063632_82063760_82077004
Isoform_3705_16	chr10	-	2034	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	-3	4	-3	0	multi-exon	FALSE	canonical	3	32	junction_1	52.6898683071254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTATTTATGTTGTC	NA	False	NA	NA	False	NA	NA	NA	82077110	82060687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
Isoform_3706_6	chr10	-	2337	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	-19	-283	-12	283	multi-exon	FALSE	canonical	3	32	junction_1	52.6898683071254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGGGTACTTGCTGCC	NA	False	NA	NA	False	AATAAA	-20	NA	82077126	82060400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
Isoform_37066_287	chr13	-	5960	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-49	198	-49	-198	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTTAACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	46881465	46833578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
Isoform_37069_83	chr13	-	6173	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-52	-12	-52	12	multi-exon	TRUE	canonical	3	242	junction_11	30.6722857910241	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGTACTTCTAGCTT	NA	False	NA	-21	True	AATAAA	-13	NA	46881468	46833368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
Isoform_3707_3	chr10	-	2220	5	NNC	ENSMUSG00000062931.16	novel	2035	4	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	54.3438128953058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATGTTGTCATTATT	NA	False	NA	NA	False	NA	NA	NA	82077110	82060681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_82062428_82063364_82063426_82063632_82063760_82072440_82072621_82077004
Isoform_3708_24	chr10	-	391	3	ISM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	2	2582	2	-2582	5prime_fragment	FALSE	canonical	3	139	junction_1	4.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTGAGGAGTTTTAAA	NA	False	NA	-25	True	NA	NA	NA	82077112	82063269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_82063426_82063632_82063760_82077004
Isoform_37085_3	chr13	-	2504	2	ISM	ENSMUSG00000021375.12	ENSMUST00000223881.2	3917	16	33592	-6	-503	-2	3prime_fragment	FALSE	canonical	3	55	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGATCGTCTGTTCT	NA	False	NA	0	True	AATACA	-22	NA	46906522	46902564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_46904103_46905556
Isoform_37088_3	chr13	-	3951	16	FSM	ENSMUSG00000021375.12	ENSMUST00000223881.2	3917	16	-35	1	-35	-1	multi-exon	FALSE	canonical	3	34	junction_2	16.4059609762902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCAAAGTGTTGATCGT	NA	False	NA	-7	True	AATACA	-15	NA	46940149	46902571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988
Isoform_3709_3	chr10	-	2982	3	NIC	ENSMUSG00000062931.16	novel	2035	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	139	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATGTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	82077117	82060683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_82063426_82063632_82063760_82077004
Isoform_37090_6	chr13	-	7026	39	NIC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-62	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_28	14.9840404478914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAAGTGTTGATCGTCT	NA	False	NA	-5	True	AATACA	-17	NA	47083256	46902569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47018294_47018308_47082691_47082783_47083042
Isoform_37092_4	chr13	-	430	3	ISM	ENSMUSG00000021375.12	ENSMUST00000223881.2	3917	16	-66	29808	-66	1	5prime_fragment	FALSE	canonical	3	53	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAAAGGTATGTGATGG	NA	False	NA	NA	False	ATTAAA	-41	NA	46940180	46932378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_46932470_46938721_46938869_46939988
Isoform_37094_31	chr13	-	1005	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	68	1635	2	1	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTAGCCATGGTTTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	47196618	47178653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
Isoform_37097_29	chr13	-	1029	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	44	1635	-22	1	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTAGCCATGGTTTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	47196642	47178653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
Isoform_37098_4	chr13	-	2674	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	26	8	26	-8	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTTCCTGAGCTT	NA	False	NA	NA	False	AATAAA	-8	NA	47196660	47177026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
Isoform_37099_10	chr13	-	2627	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	74	7	2	-7	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTTTCCTGAGCTTG	NA	False	NA	NA	False	AATAAA	-9	NA	47196612	47177025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
Isoform_37100_21	chr13	-	1005	9	NIC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	30.2438010177292	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTAGCCATGGTTTC	NA	False	NA	-2	True	ATTAAA	-17	NA	47196642	47178654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196602
Isoform_3711_8	chr10	-	392	2	FSM	ENSMUSG00000063320.12	ENSMUST00000176200.8	586	2	16	178	16	-3	multi-exon	FALSE	canonical	3	449	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAATTTAGGGGGCTCAAT	NA	False	NA	-3	True	AGTAAA	-17	NA	82458744	82455862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82456052_82458541
Isoform_37114_158	chr13	-	2536	10	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	353	2	-7	-2	3prime_fragment	FALSE	canonical	3	1428	junction_1	93.7092956902645	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259313	47238259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047
Isoform_37118_1387	chr13	-	2546	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	8	2	1	-2	multi-exon	FALSE	canonical	3	1333	junction_10	113.482333426838	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259658	47238259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
Isoform_3712_55	chr10	-	689	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	21	6	15	-6	multi-exon	FALSE	canonical	3	302	junction_2	73.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTCTTACTATACAT	NA	False	NA	-6	True	NA	NA	NA	82459009	82455690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82456052_82458541_82458659_82458798
Isoform_3713_90	chr10	-	519	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	21	176	15	-1	multi-exon	FALSE	canonical	3	302	junction_2	73.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGGGGGCTCAATGG	NA	False	NA	-1	True	AGTAAA	-19	NA	82459009	82455860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82456052_82458541_82458659_82458798
Isoform_3714_29	chr10	-	554	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	-14	176	-14	-1	multi-exon	FALSE	canonical	3	302	junction_2	73.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGGGGGCTCAATGG	NA	False	NA	-1	True	AGTAAA	-19	NA	82459044	82455860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82456052_82458541_82458659_82458798
Isoform_37143_6	chr13	-	691	3	FSM	ENSMUSG00000097326.3	ENSMUST00000180777.3	672	3	-20	1	-20	-1	multi-exon	FALSE	canonical	3	15	junction_1	5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTTTGTATGTGTGAT	NA	False	NA	0	True	ATTAAA	-14	NA	48427380	48425889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_48426292_48426385_48426533_48427238
Isoform_37144_3	chr13	-	2645	5	NIC	ENSMUSG00000050954.16	novel	4145	5	NA	NA	7	85	intron_retention	FALSE	canonical	0	0	junction_1	6.68487097856047	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTAGGGGAAAGCCCTT	NA	False	NA	NA	False	AGTAAA	-13	NA	48666920	48642592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_48644870_48651798_48651895_48652255_48652383_48660382_48660470_48666862
Isoform_37145_3	chr13	-	4100	5	NIC	ENSMUSG00000050954.16	novel	4145	5	NA	NA	-7	-2	intron_retention	FALSE	canonical	0	0	junction_1	6.68487097856047	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTCTCAACAATTCC	NA	False	NA	NA	False	NA	NA	NA	48666919	48641136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_48644870_48651798_48651895_48652255_48652383_48660382_48660470_48666862
Isoform_37146_9	chr13	-	3012	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	50	1340	-33	-2	multi-exon	FALSE	canonical	3	9	junction_8	3.87138919781874	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAACTTGAAGC	NA	False	NA	NA	False	AATACA	-13	NA	48779090	48732687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
Isoform_37149_10	chr13	-	4324	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	78	0	-5	0	multi-exon	TRUE	canonical	3	9	junction_8	3.87138919781874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCCCGTCTTGTGGTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	48779062	48731347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
Isoform_37150_7	chr13	-	4408	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	-7	1	-7	-1	multi-exon	FALSE	canonical	3	9	junction_8	3.87138919781874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACCCCGTCTTGTGGTTC	NA	False	NA	NA	False	AATAAA	-18	NA	48779147	48731348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
Isoform_37154_24	chr13	-	5284	22	FSM	ENSMUSG00000038025.9	ENSMUST00000035540.9	5494	22	207	3	207	-3	multi-exon	TRUE	canonical	3	26	junction_1	5.86043268042677	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCATGTGTCTGTCGTG	NA	False	NA	-3	True	AGTAAA	-20	NA	49024388	48955228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961353_48966384_48966546_48967178_48967250_48967341_48967521_48969430_48969547_48969910_48970031_48970981_48971342_48971777_48971868_48973015_48973108_48973516_48973624_48974001_48974090_48975006_48975170_48976424_48976612_48979527_48979670_48982261_48982423_48985479_48985595_48988685_48988772_49024143
Isoform_3716_96	chr10	-	592	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	-17	-169	-11	-6	multi-exon	FALSE	canonical	3	187	junction_2	131	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTCTTACTATACAT	NA	False	NA	-6	True	NA	NA	NA	82459041	82455690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82456052_82458541_82458659_82458927
Isoform_3717_123	chr10	-	422	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	-17	1	-11	-1	multi-exon	FALSE	canonical	3	187	junction_2	131	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGGGGGCTCAATGG	NA	False	NA	-1	True	AGTAAA	-19	NA	82459041	82455860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82456052_82458541_82458659_82458927
Isoform_37179_6	chr13	-	5620	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-515	0	-515	0	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	5868	False	NA	-18	True	AATAAA	-21	NA	49122008	49032694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
Isoform_3718_15	chr10	-	533	3	FSM	ENSMUSG00000063320.12	ENSMUST00000185168.8	469	3	21	-85	-11	-6	multi-exon	FALSE	canonical	3	100	junction_2	174.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTCTTACTATACAT	NA	False	NA	-6	True	NA	NA	NA	82459041	82455690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82456052_82458541_82458659_82458986
Isoform_37180_161	chr13	-	5367	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-261	-1	-261	1	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGGTGTGGCTTTTAA	6122	False	NA	-17	True	AATAAA	-22	NA	49121754	49032693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
Isoform_37182_209	chr13	-	5146	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-41	0	-41	0	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	6342	False	NA	-18	True	AATAAA	-21	NA	49121534	49032694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
Isoform_37187_7	chr13	-	2421	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-89	30797	-89	-30797	5prime_fragment	FALSE	canonical	3	223	junction_3	19.2725737452327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGACGACATTACTCTG	6294	False	NA	NA	False	AATAAA	-21	NA	49121582	49063491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
Isoform_3719_23	chr10	-	362	3	FSM	ENSMUSG00000063320.12	ENSMUST00000185168.8	469	3	22	85	-10	-1	multi-exon	FALSE	canonical	3	100	junction_2	174.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGGGGGCTCAATGG	NA	False	NA	-1	True	AGTAAA	-19	NA	82459040	82455860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82456052_82458541_82458659_82458986
Isoform_37191_8	chr13	-	933	6	NIC	ENSMUSG00000037960.12	novel	937	7	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	138.488411067497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369447	49356425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369229
Isoform_37193_297	chr13	-	773	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	32	-1	32	0	multi-exon	FALSE	canonical	3	362	junction_5	10.4115320678563	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369470	49356425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
Isoform_37195_4	chr13	-	801	6	NNC	ENSMUSG00000037960.12	novel	937	7	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	151.672014557729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369428	49356425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369342
Isoform_37197_30	chr13	-	912	5	NIC	ENSMUSG00000037960.12	novel	804	6	NA	NA	32	0	intron_retention	FALSE	canonical	3	362	junction_4	11.146748404804	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369470	49356425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_49356712_49357193_49357465_49358667_49358822_49361479_49361623_49369412
Isoform_37199_16	chr13	-	1133	5	FSM	ENSMUSG00000021384.15	ENSMUST00000058196.13	1418	5	142	143	2	-4	multi-exon	FALSE	canonical	2	5	junction_4	5.02493781056044	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGGTAGCCACCTTAT	NA	False	NA	0	True	AATAAA	-12	NA	49401628	49384308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_49384808_49390899_49391089_49392264_49392413_49393958_49394148_49401520
Isoform_37200_3	chr13	-	953	4	NIC	ENSMUSG00000021384.15	novel	1418	5	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	5.8878405775519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGTAGCCACCTTATC	NA	False	NA	1	True	AATAAA	-13	NA	49401636	49384307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_49384808_49390899_49391089_49392264_49392413_49401520
Isoform_37201_143	chr13	-	1122	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	19	3	1	-3	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATAGTGCTTTGTACA	NA	False	NA	-7	True	AATAAA	-18	NA	49806242	49617501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
Isoform_37202_4	chr13	-	1281	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	-140	3	-140	-3	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATAGTGCTTTGTACA	NA	False	NA	-7	True	AATAAA	-18	NA	49806401	49617501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
Isoform_37205_6	chr13	-	960	6	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	-9	3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	81.0668859646157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCTTTGTACAGTTAAG	NA	False	NA	-1	True	AATAAA	-24	NA	49806252	49617495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49803596_49803776_49806058
Isoform_37209_12	chr13	-	3159	18	NIC	ENSMUSG00000021451.17	novel	1249	5	NA	NA	-15	-4	combination_of_known_splicesites	TRUE	canonical	1	2	junction_2	67.7604165309136	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATGTCTCTAGGTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	51947724	51839568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_51840283_51841318_51841417_51845324_51845535_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
Isoform_37216_8	chr13	-	4517	17	FSM	ENSMUSG00000021451.17	ENSMUST00000110040.9	4472	17	-45	0	29	0	multi-exon	FALSE	canonical	3	16	junction_15	57.0268234583516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGCCTTTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	51947754	51855281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51888542_51888607_51917287_51917357_51947532
Isoform_37218_6	chr13	-	4298	15	NIC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_14	50.4570943212839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGCCTTTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	51908767	51855281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51908631
Isoform_37219_10	chr13	-	4278	15	NIC	ENSMUSG00000021451.17	novel	4415	15	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_14	49.7949366330123	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCAGCCTTTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	51910709	51855282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51910592
Isoform_37221_251	chr13	-	4446	16	FSM	ENSMUSG00000021451.17	ENSMUST00000021900.14	4482	16	34	2	34	-2	multi-exon	FALSE	canonical	3	95	junction_9	25.4317387005555	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCCAGCCTTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	51947749	51855283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
Isoform_37227_5	chr13	-	1216	10	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	115.424605289223	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTTATACCAAATGT	NA	False	NA	-14	True	AATAAA	-22	NA	53083527	52989154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083424
Isoform_37229_174	chr13	-	1303	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	13	4	0	-4	multi-exon	FALSE	canonical	3	269	junction_3	77.7090172246741	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTGAAGTTATACCAA	NA	False	NA	-18	True	AATAAA	-18	NA	53083684	52989158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
Isoform_37235_11	chr13	-	1165	8	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	139.021948054314	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTGAAGTTATACCAA	NA	False	NA	-18	True	AATAAA	-18	NA	53083696	52989158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53052685_53052773_53073036_53073125_53073234_53073303_53083490
Isoform_37238_44	chr13	-	2631	4	FSM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	-6	2	1	-2	multi-exon	FALSE	canonical	3	17	junction_1	210.944437128727	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGGCTGCTCTCT	NA	False	NA	-26	True	AATAAA	-15	NA	53083696	53061082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_53063352_53073036_53073125_53073234_53073303_53083490
Isoform_37240_5	chr13	-	2678	4	NIC	ENSMUSG00000021460.18	novel	2627	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	215.643223867573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGCTGCTCTCTCA	NA	False	NA	-24	True	AATAAA	-17	NA	53083699	53061080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_53063394_53073036_53073125_53073234_53073303_53083490
Isoform_37243_11	chr13	-	3205	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	33	-3	0	3	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGGTCACAGTGCATT	NA	False	NA	NA	False	ATTAAA	-20	NA	53083684	53064242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
Isoform_37244_46	chr13	-	575	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	33	2627	0	12	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGGCGCTCATGAGCA	NA	False	NA	2	True	AATAAA	-27	NA	53083684	53066872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
Isoform_37246_102	chr13	-	2022	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	4	0	4	0	multi-exon	FALSE	canonical	3	64	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCTGTTCCACTT	NA	False	NA	1	True	AATAAA	-19	NA	53135105	53121244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_53123058_53134896
Isoform_3725_251	chr10	-	2459	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	19	76	19	-76	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTGTACATCGTAACT	NA	False	NA	-9	True	TATAAA	-15	NA	82599959	82584610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
Isoform_37252_249	chr13	-	3966	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	17	2	17	-2	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTATTATCTCTG	NA	False	NA	-30	True	NA	NA	NA	53440143	53263354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
Isoform_37253_123	chr13	-	4068	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	-84	1	-84	-1	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTATTATCTCTGG	NA	False	NA	-29	True	NA	NA	NA	53440244	53263353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
Isoform_37258_25	chr13	-	3756	9	NNC	ENSMUSG00000021464.16	novel	3730	9	NA	NA	115220	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	35.4788669492136	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTATTATCTCTGG	NA	False	NA	-29	True	NA	NA	NA	53314474	53263353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53314358
Isoform_37266_387	chr13	-	2569	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	33	4	1	-4	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAGTCTGTTTGGATA	1862	False	NA	-22	True	AATAAA	-23	NA	53531400	53486787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
Isoform_37267_15	chr13	-	2630	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	33	-57	1	57	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCCCTGTGTGTTTTTC	1862	False	NA	39	True	NA	NA	NA	53531400	53486726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
Isoform_3727_224	chr10	-	2511	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	10	33	10	-33	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	34	True	AATAAA	-10	NA	82599968	82584567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
Isoform_37271_7	chr13	-	2777	15	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	3	-15	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	43.1367072248692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTCCTGAAAAGGAGT	1864	False	NA	-33	True	AATAAA	-12	NA	53531398	53486798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531107
Isoform_37273_9	chr13	-	2849	3	NNC	ENSMUSG00000113404.2	novel	2746	2	NA	NA	-2775	1	intron_retention	FALSE	canonical	3	5	junction_1	1	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTTATGTGTTTGTT	NA	False	NA	NA	False	AATATA	-13	NA	54484674	54463922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_54466497_54481726_54481884_54484556
Isoform_37274_6	chr13	-	2903	3	NNC	ENSMUSG00000113404.2	novel	2746	2	NA	NA	-3265	1	intron_retention	FALSE	canonical	1	2	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTTATGTGTTTGTT	NA	False	NA	NA	False	AATATA	-13	NA	54485164	54463922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_54466497_54481726_54481884_54484992
Isoform_37277_602	chr13	-	2306	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	30	-1	7	1	multi-exon	FALSE	canonical	3	501	junction_3	36.0699320764539	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGTCTAAAGTTACTAT	NA	False	NA	-2	True	AATAAA	-16	NA	54616632	54606648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
Isoform_37293_1321	chr13	-	2640	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	81	6	2	-1	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGTCTGTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	54713167	54699036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
Isoform_37296_135	chr13	-	2552	8	FSM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	-51	1	2	-1	multi-exon	FALSE	canonical	3	41	junction_6	177.014469603419	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGTCTGTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	54713167	54699036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327_54712435_54712994
Isoform_3730_29	chr10	-	2498	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	-19	75	-19	-75	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTACATCGTAACTT	NA	False	NA	-8	True	TATAAA	-16	NA	82599997	82584609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
Isoform_37301_38	chr13	-	2139	5	FSM	ENSMUSG00000025871.19	ENSMUST00000153708.2	946	5	-21	-1172	2	-1	multi-exon	FALSE	canonical	3	31	junction_4	214.957408572024	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGTCTGTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	54713167	54699036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712994
Isoform_37304_936	chr13	-	1093	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	19	644	-13	-293	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGGTGGGTTTTTGTTTGT	NA	False	NA	-19	True	GATAAA	-26	NA	54737884	54732641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
Isoform_37305_130	chr13	-	1175	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	19	562	-13	-211	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTTGTGTTTACTGT	NA	False	NA	-4	True	ATTAAA	-14	NA	54737884	54732559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
Isoform_37310_15	chr13	-	1734	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	17	5	-15	-5	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGTAAGATGCACTTT	NA	False	NA	-8	True	NA	NA	NA	54737886	54732002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
Isoform_37313_67	chr13	-	2193	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	-32	25	-32	-25	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGTATTACTGGATTAA	7373	False	NA	-6	True	AATAAA	-16	NA	54759189	54740238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
Isoform_37314_169	chr13	-	2161	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	25	0	-25	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGTATTACTGGATTAA	7405	False	NA	-6	True	AATAAA	-16	NA	54759157	54740238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
Isoform_37318_207	chr13	-	1000	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	2	1184	2	0	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGTATCCTCATTTC	7407	False	NA	-35	True	NA	NA	NA	54759155	54741397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
Isoform_37339_26	chr13	-	3921	11	FSM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	20	0	20	0	multi-exon	FALSE	canonical	3	234	junction_10	160.927934181732	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54835601	54827211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
Isoform_37340_75	chr13	-	3846	11	FSM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	94	1	-60	-1	multi-exon	FALSE	canonical	3	234	junction_10	160.927934181732	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCTCTGGCTGCTCTC	NA	False	NA	-6	True	AATAAA	-27	NA	54835527	54827212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
Isoform_37343_56	chr13	-	3718	11	FSM	ENSMUSG00000034928.17	ENSMUST00000128257.8	1689	11	134	-2163	-31	-1	multi-exon	FALSE	canonical	3	111	junction_10	190.55762907845	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGCCTCTGGCTGCTC	NA	False	NA	-8	True	AATAAA	-25	NA	54835938	54827214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835843
Isoform_37344_31	chr13	-	3785	11	FSM	ENSMUSG00000034928.17	ENSMUST00000128257.8	1689	11	70	-2166	-1	0	multi-exon	FALSE	canonical	3	111	junction_10	190.55762907845	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54836002	54827211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835843
Isoform_37349_207	chr13	-	3740	11	FSM	ENSMUSG00000034928.17	ENSMUST00000037422.16	3734	11	3	-9	2	0	multi-exon	FALSE	canonical	3	393	junction_7	120.344339293546	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841657	54827213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
Isoform_37359_32	chr13	-	3779	11	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	206.37286643355	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGCCTCTGGCTGCTC	NA	False	NA	-8	True	AATAAA	-25	NA	54841694	54827214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831903_54832150_54832302_54841541
Isoform_3736_21	chr10	-	2562	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	-41	33	-41	-33	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	34	True	AATAAA	-10	NA	82600019	82584567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
Isoform_37363_19	chr13	-	3911	11	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_9	207.732520323612	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54835527	54827211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54835306
Isoform_37364_17	chr13	-	3774	11	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_10	229.57833085899	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54835938	54827222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54835843
Isoform_37367_91	chr13	-	3825	11	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_9	182.191547553667	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841678	54827213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54841541
Isoform_37375_29	chr13	-	3922	11	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	234	junction_10	182.338257093787	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54835601	54827213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54835306
Isoform_37376_58	chr13	-	3849	11	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-60	-1	combination_of_known_junctions	FALSE	canonical	3	234	junction_10	182.338257093787	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCTCTGGCTGCTCTC	NA	False	NA	-6	True	AATAAA	-27	NA	54835527	54827212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54835306
Isoform_37379_36	chr13	-	3721	11	FSM	ENSMUSG00000034928.17	ENSMUST00000150806.8	3772	11	55	-4	-39	0	multi-exon	FALSE	canonical	3	111	junction_10	208.151603404826	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54835946	54827222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54835843
Isoform_37381_216	chr13	-	3765	11	FSM	ENSMUSG00000034928.17	ENSMUST00000134862.8	3797	11	42	-10	-15	-1	multi-exon	FALSE	canonical	3	257	junction_7	149.659480154115	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCTCTGGCTGCTCTC	NA	False	NA	-6	True	AATAAA	-27	NA	54841678	54827212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54841541
Isoform_37388_27	chr13	-	3722	11	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	221.993153047566	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841633	54827213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831903_54832150_54832302_54841541
Isoform_3739_12	chr10	-	2380	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	10	-33	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	324.615884118788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	34	True	AATAAA	-10	NA	82599968	82584567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599837
Isoform_37394_55	chr13	-	3829	11	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	163	junction_9	200.392015809014	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCTCTGGCTGCTCTC	NA	False	NA	-6	True	AATAAA	-27	NA	54841678	54827212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54841541
Isoform_37401_61	chr13	-	1292	6	FSM	ENSMUSG00000034891.14	ENSMUST00000036825.14	1351	6	59	0	-44	0	multi-exon	FALSE	canonical	0	0	junction_2	35.7636687156114	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	-1	True	AATAAA	-16	NA	54914349	54906672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54914117
Isoform_37402_26	chr13	-	1317	6	FSM	ENSMUSG00000034891.14	ENSMUST00000036825.14	1351	6	34	0	34	0	multi-exon	FALSE	canonical	0	0	junction_2	35.7636687156114	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	-1	True	AATAAA	-16	NA	54914374	54906672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54914117
Isoform_37404_120	chr13	-	2475	15	FSM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	60	396	19	19	multi-exon	FALSE	canonical	0	0	junction_10	39.2030949423795	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAAGTGTTTTTTTTTT	NA	False	NA	NA	False	AATATA	-31	NA	55248048	55176088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
Isoform_37406_3	chr13	-	2778	14	NIC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	14	10	intron_retention	FALSE	canonical	3	94	junction_9	22.0505068438575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAATAGATGGAAGTGT	NA	False	NA	NA	False	AATATA	-22	NA	55248053	55176097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
Isoform_37407_8	chr13	-	1669	13	FSM	ENSMUSG00000025878.17	ENSMUST00000099496.4	1678	13	20	-11	15	11	multi-exon	FALSE	canonical	3	14	junction_9	37.4398591818339	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATAGATGGAAGTGTT	NA	False	NA	NA	False	AATATA	-23	NA	55248093	55176096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55225215_55225341_55233422_55233508_55240939_55241095_55248009
Isoform_37408_12	chr13	-	2401	14	NIC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	21	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	49.8302443746553	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATAGATGGAAGTGTT	NA	False	NA	NA	False	AATATA	-23	NA	55248046	55176096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55176532_55177228_55177272_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
Isoform_37409_7	chr13	-	597	4	FSM	ENSMUSG00000025878.17	ENSMUST00000133187.2	2735	4	10	2128	6	193	multi-exon	FALSE	canonical	3	148	junction_3	8.65383665716478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCATGTTGCTGATTA	NA	False	NA	NA	False	AATAAA	-23	NA	55248102	55225076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55225341_55233422_55233508_55240939_55241095_55248009
Isoform_37412_200	chr13	-	1169	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	-1	0	0	0	multi-exon	FALSE	canonical	3	320	junction_3	95.4118890465364	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6441	False	NA	-22	True	AATAAA	-14	NA	55469759	55467697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
Isoform_37415_53	chr13	-	1437	6	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	480	junction_5	51.3949413853153	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6443	False	NA	-22	True	AATAAA	-14	NA	55469757	55467697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202
Isoform_37416_321	chr13	-	1352	7	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	458	junction_6	60.0101843208486	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6449	False	NA	-22	True	AATAAA	-14	NA	55469751	55467697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
Isoform_37418_18	chr13	-	1191	8	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	193.89077505921	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6441	False	NA	-22	True	AATAAA	-14	NA	55469759	55467697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55468050_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
Isoform_37422_51	chr13	-	1026	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	-12	313	-12	1	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCCATGGTTTT	6143	False	NA	-2	True	ATTAAA	-13	NA	55477583	55473293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
Isoform_37423_14	chr13	-	1348	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	-18	-3	-18	3	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTACAGTCTATCACCTGC	6137	False	NA	-4	True	NA	NA	NA	55477589	55472977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
Isoform_37427_3	chr13	-	1767	4	FSM	ENSMUSG00000021485.15	ENSMUST00000146181.8	1742	4	-24	-1	1	1	multi-exon	FALSE	canonical	3	87	junction_2	6.23609564462324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCCATGGTTTT	6156	False	NA	-2	True	ATTAAA	-13	NA	55477570	55473293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55473712_55473825_55474010_55476182_55477188_55477410
Isoform_37434_516	chr13	-	2587	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	166	1562	-6	1198	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGGCTGATGGTCTCTG	3005	False	NA	1	True	AATAAA	-18	NA	55510430	55493207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_37435_71	chr13	-	2785	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	-32	1562	-32	1198	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGGCTGATGGTCTCTG	2807	False	NA	1	True	AATAAA	-18	NA	55510628	55493207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_37437_1963	chr13	-	1239	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	166	2910	-6	-150	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGCCCAGCTGAG	3005	False	NA	-4	True	ATTAAA	-16	NA	55510430	55494555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_37438_174	chr13	-	4146	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	166	3	-6	-3	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTGAGTTGTGTGCTC	3005	False	NA	-6	True	NA	NA	NA	55510430	55491648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_37443_202	chr13	-	1437	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	-32	2910	-32	-150	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGCCCAGCTGAG	2807	False	NA	-4	True	ATTAAA	-16	NA	55510628	55494555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_37449_91	chr13	-	2596	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	51	293	1	222	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCTTCCCCTT	NA	False	NA	-21	True	AATAAA	-19	NA	55635873	55621534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_37452_41	chr13	-	2553	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	29	358	-16	157	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGGCTTCAGATATTTT	NA	False	NA	1	True	NA	NA	NA	55635895	55621599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_37453_14	chr13	-	2724	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	-68	284	-68	231	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCCCCTTCTCTTTACC	NA	False	NA	-12	True	AATAAA	-28	NA	55635992	55621525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_37454_27	chr13	-	2909	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	30	1	-15	-1	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCGGGCCTGCTGCTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	55635894	55621242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_37455_5	chr13	-	3003	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	-63	0	-63	0	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGGCCTGCTGCTCTGG	NA	False	NA	NA	False	AATAAA	-14	NA	55635987	55621241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_37459_30	chr13	-	2631	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	-31	-222	19	222	multi-exon	FALSE	canonical	3	24	junction_2	11.9649389180894	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCTTCCCCTT	NA	False	NA	-21	True	AATAAA	-19	NA	55635905	55621534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_37463_9	chr13	-	2939	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	-46	-515	4	0	multi-exon	FALSE	canonical	3	24	junction_2	11.9649389180894	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGGCCTGCTGCTCTGG	NA	False	NA	NA	False	AATAAA	-14	NA	55635920	55621241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_37464_3	chr13	-	3011	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	-119	-514	-69	-1	multi-exon	FALSE	canonical	3	24	junction_2	11.9649389180894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCGGGCCTGCTGCTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	55635993	55621242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_37465_3	chr13	-	1588	13	NIC	ENSMUSG00000021493.16	novel	1697	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	47.9406461737382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	55661250	55646226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55655676_55655694_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_37466_129	chr13	-	1685	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	14	-2	2	-2	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	55661245	55646226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_37467_4	chr13	-	2614	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	8	-925	0	-1	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTAGTCTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	55661251	55645303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_37468_3	chr13	-	1018	9	NIC	ENSMUSG00000021493.16	novel	899	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	59.3073298589643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	False	NA	-3	True	AATAAA	-16	NA	55661247	55654586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55654937_55655142_55655180_55655300_55655438_55655676_55655694_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_37469_95	chr13	-	1002	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	4	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	27.1751687376246	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	False	NA	-2	True	AATAAA	-17	NA	55661247	55654585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_37470_12	chr13	-	882	7	NIC	ENSMUSG00000021493.16	novel	899	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	53.4716955241016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	False	NA	-3	True	AATAAA	-16	NA	55661247	55654586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55654937_55655142_55655180_55655300_55655438_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_37476_2448	chr13	-	2071	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	128	0	-9	0	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	2448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684343	55678228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
Isoform_37479_30	chr13	-	2155	16	NIC	ENSMUSG00000021494.10	novel	2199	17	NA	NA	-12	0	intron_retention	FALSE	canonical	3	642	junction_9	44.9204729370572	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684346	55678228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683859_55684108_55684220_55684293
Isoform_3748_65	chr10	-	3049	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	34	2944	-25	-965	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAACCTCTTTTTA	NA	False	NA	-19	True	AAGAAA	-24	NA	83369970	83326257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
Isoform_3749_34	chr10	-	5998	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	25	4	25	-4	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTCTTTTCTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	83369979	83323317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
Isoform_37495_16	chr13	-	4301	11	FSM	ENSMUSG00000021495.11	ENSMUST00000021957.8	4341	11	37	3	17	0	multi-exon	FALSE	canonical	3	48	junction_9	46.3227805728456	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718896	55687131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
Isoform_37497_39	chr13	-	3185	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	48.4171686720963	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718909	55687129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55718587
Isoform_37499_19	chr13	-	4358	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	51.3880070904416	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718905	55687129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
Isoform_37501_6	chr13	-	5197	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	48	junction_8	45.9511280910437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718926	55687131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
Isoform_37502_14	chr13	-	1899	5	NIC	ENSMUSG00000021495.11	novel	2950	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	62.8589691293136	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55718909	55687128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55718587
Isoform_37503_26	chr13	-	2301	3	FSM	ENSMUSG00000021506.8	ENSMUST00000021968.7	2451	3	150	0	150	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGAGCCCTAGCTGCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	55979088	55972863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_55974425_55976252_55976489_55978584
Isoform_37517_1319	chr13	-	1902	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6043	False	NA	-8	True	AGTAAA	-15	NA	56283306	56221434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
Isoform_3752_12	chr10	-	3082	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	1	2944	1	-965	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAACCTCTTTTTA	NA	False	NA	-19	True	AAGAAA	-24	NA	83370003	83326257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
Isoform_37529_815	chr13	-	1890	9	FSM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	153	3	-38	0	multi-exon	FALSE	canonical	3	557	junction_5	233.718279933342	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6058	False	NA	-8	True	AGTAAA	-15	NA	56283291	56221434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
Isoform_37543_4	chr13	-	3452	3	FSM	ENSMUSG00000049625.7	ENSMUST00000225063.2	2718	3	36	-770	36	-9	multi-exon	FALSE	canonical	1	1	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAACAAGAGACATTCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	56326662	56321525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_56324447_56324717_56324946_56326359
Isoform_37545_53	chr13	-	1661	4	FSM	ENSMUSG00000021508.12	ENSMUST00000021970.11	1827	4	163	3	-83	-3	multi-exon	FALSE	canonical	3	62	junction_2	5.8878405775519	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTACTCCTGGGCT	NA	False	NA	-1	True	AATAAA	-19	NA	56444201	56436458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_56437621_56440273_56440388_56443638_56443745_56443922
Isoform_37556_1614	chr13	-	3658	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	24	4	-10	3	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTGTCTCGCCTCTTT	1751	False	NA	-6	True	AATAAA	-16	NA	58363443	58323973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
Isoform_37559_87	chr13	-	3679	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	0	7	0	0	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1727	False	NA	-9	True	AATAAA	-13	NA	58363467	58323976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
Isoform_3756_3	chr10	-	2838	21	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-34	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	21.7591360122593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTATTGTGGTTAGT	NA	False	NA	-2	True	AATAAA	-16	NA	83484636	83435898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_83436692_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_3757_19	chr10	-	2733	21	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	21.7591360122593	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTATTGTGGTTAGT	NA	False	NA	-2	True	AATAAA	-16	NA	83484531	83435898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_83436692_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_37576_723	chr13	-	3564	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	-3	0	-3	0	multi-exon	FALSE	canonical	3	487	junction_3	294.557588324433	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1758	False	NA	-9	True	AATAAA	-13	NA	58363436	58323976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
Isoform_37587_3	chr13	-	2569	6	ISM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	28441	5	-1796	-5	3prime_fragment	FALSE	canonical	0	0	junction_5	66.2299026120377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	8972	False	NA	-3	True	AATAAA	-17	NA	58393561	58381164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615
Isoform_37589_9	chr13	-	1845	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	-326	4	-326	-4	multi-exon	FALSE	canonical	0	0	junction_5	54.7743681383791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTGATCTTCAC	NA	False	NA	-2	True	AATAAA	-18	NA	58422328	58381163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
Isoform_3759_225	chr10	-	2966	21	FSM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	52	2	-11	-2	multi-exon	FALSE	canonical	3	74	junction_1	12.9324205004322	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTATTGTGGTTAGT	NA	False	NA	-2	True	AATAAA	-16	NA	83484550	83435898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_37591_39	chr13	-	1682	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	-163	4	-163	-4	multi-exon	FALSE	canonical	0	0	junction_5	54.7743681383791	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTGATCTTCAC	NA	False	NA	-2	True	AATAAA	-18	NA	58422165	58381163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
Isoform_37594_585	chr13	-	1143	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	43	1865	43	-1865	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGGTGCACGCCTTT	NA	False	NA	-17	True	TATAAA	-19	NA	58532996	58529495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
Isoform_37595_22	chr13	-	2793	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	20	238	20	-238	multi-exon	TRUE	canonical	3	402	junction_2	21.2289111041209	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTATAAACTAAAAATACAAA	NA	False	NA	NA	False	NA	NA	NA	58533019	58527868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
Isoform_37598_41	chr13	-	1420	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	11	1620	11	-1620	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCATGTCTTCAGTTG	NA	False	NA	-4	True	NA	NA	NA	58533028	58529250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
Isoform_3761_6	chr10	-	4224	20	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	13	-2	intron_retention	FALSE	canonical	3	74	junction_1	12.6836645438291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTATTGTGGTTAGT	NA	False	NA	-2	True	AATAAA	-16	NA	83484589	83435898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_3763_3	chr10	-	4242	19	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	74	junction_1	11.8286375659527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484529	83435896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83447064_83447313_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_37639_603	chr13	-	1935	16	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	1429	junction_15	1716.40976718524	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5124	False	NA	-5	True	AATAAA	-14	NA	58549957	58539763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
Isoform_3764_7	chr10	-	4491	18	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	74	junction_1	12.1629649453978	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTTATTGTGGTTAG	NA	False	NA	-3	True	AATAAA	-15	NA	83484531	83435899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_37640_215	chr13	-	2642	16	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	1429	junction_15	1716.40976718524	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	5132	False	NA	-19	True	AATAAA	-19	NA	58549949	58539048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
Isoform_37649_3171	chr13	-	1979	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	-14	711	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	1087.93485507584	3171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_3765_13	chr10	-	1528	10	ISM	ENSMUSG00000020263.15	ENSMUST00000147582.8	3377	14	3	7920	-2	694	5prime_fragment	FALSE	canonical	3	97	junction_4	6.21825270205921	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACACATAGTGCCTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	83484531	83449428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_37650_343	chr13	-	2782	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	-14	-92	0	-5	multi-exon	FALSE	canonical	3	4513	junction_1	1087.93485507584	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGGGGTTTTGTGTGT	4751	False	NA	-13	True	AATACA	-10	NA	58550330	58538960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_37651_1132	chr13	-	2691	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	-14	-1	0	1	multi-exon	FALSE	canonical	3	4513	junction_1	1087.93485507584	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4751	False	NA	-22	True	AATAAA	-16	NA	58550330	58539051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_3767_876	chr10	-	3049	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	40	0	14	0	multi-exon	FALSE	canonical	3	271	junction_1	0	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGGTTCTGAGAACT	NA	False	NA	-15	True	AATAAA	-26	NA	84369886	84362168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_84364642_84369310
Isoform_3773_72	chr10	-	3153	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	-64	0	-64	0	multi-exon	FALSE	canonical	3	271	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGGTTCTGAGAACT	NA	False	NA	-15	True	AATAAA	-26	NA	84369990	84362168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_84364642_84369310
Isoform_37741_798	chr13	-	1975	16	FSM	ENSMUSG00000021546.19	ENSMUST00000225674.2	2704	16	19	710	-6	1	multi-exon	FALSE	canonical	3	1429	junction_15	1661.36162897252	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGGTCTTTTTTTTT	5145	False	NA	-4	True	AATAAA	-15	NA	58549936	58539762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
Isoform_37743_310	chr13	-	2681	16	FSM	ENSMUSG00000021546.19	ENSMUST00000225674.2	2704	16	24	-1	-1	1	multi-exon	FALSE	canonical	3	1429	junction_15	1661.36162897252	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	5150	False	NA	-22	True	AATAAA	-16	NA	58549931	58539051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
Isoform_37750_4121	chr13	-	2039	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	0	715	0	0	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	4121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_37751_1434	chr13	-	2751	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	0	3	0	1	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4751	False	NA	-22	True	AATAAA	-16	NA	58550330	58539051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_37752_478	chr13	-	2852	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	0	-98	0	5	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGTGTGTGTGA	4751	False	NA	-3	True	AATACA	-20	NA	58550330	58538950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_37793_168	chr13	-	1967	15	FSM	ENSMUSG00000021546.19	ENSMUST00000177019.8	2626	15	-52	711	0	0	multi-exon	FALSE	canonical	3	308	junction_9	1943.30427759168	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_37800_6	chr13	-	4402	26	FSM	ENSMUSG00000021557.16	ENSMUST00000022040.14	8174	26	-20	3792	-12	3	multi-exon	FALSE	canonical	2	7	junction_25	6.92242731995071	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTCATCTTTTTA	1035	False	NA	0	True	AATAAA	-20	NA	59705145	59597347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59630330_59630419_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
Isoform_37801_5	chr13	-	1971	9	NNC	ENSMUSG00000021557.16	novel	4143	25	NA	NA	-3320	2	intron_retention	FALSE	canonical	2	7	junction_8	8.08451451851006	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTTGTCATCTTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	59625715	59597348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59625604
Isoform_37809_19	chr13	-	3549	10	NIC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	79	junction_6	137.237021244269	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGGGTTGTTTGGT	NA	False	NA	-7	True	AATAAA	-20	NA	59823597	59782811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797475_59798509_59798565_59812011_59812192_59813340_59813491_59823540
Isoform_37815_23	chr13	-	3690	11	FSM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	-2	1	-2	-1	multi-exon	TRUE	canonical	3	5	junction_10	200.252240936275	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTAGGGTTGTTTGGTG	NA	False	NA	-6	True	AATAAA	-21	NA	59823596	59782810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59822774_59822911_59823540
Isoform_37816_1381	chr13	-	3554	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	29	371	-2	-1	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTAGGGTTGTTTGGTG	NA	False	NA	-6	True	AATAAA	-21	NA	59823596	59782810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
Isoform_37817_106	chr13	-	3578	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	5	371	5	-1	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTAGGGTTGTTTGGTG	NA	False	NA	-6	True	AATAAA	-21	NA	59823620	59782810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
Isoform_3782_10	chr10	-	2384	3	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1012	1073	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	10	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATAGGCGTTTTTGACTG	8447	False	NA	-3	True	AATAAA	-18	NA	84390214	84382207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_84384062_84385083_84385495_84390095
Isoform_37838_387	chr13	-	1901	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	34	7	0	-2	multi-exon	FALSE	canonical	3	417	junction_3	1.63299316185545	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTAGTGGTTCCTTTTC	NA	False	NA	-4	True	ATTAAA	-16	NA	59917590	59903229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
Isoform_3784_3	chr10	-	2397	3	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1012	1	intron_retention	FALSE	canonical	0	0	junction_2	1	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTAAGTCAAGCATCTG	8447	False	NA	NA	False	AATAAA	-18	NA	84390214	84383279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_84385495_84388511_84388575_84390095
Isoform_37840_12	chr13	-	629	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	-6	1319	-6	34	multi-exon	FALSE	canonical	3	417	junction_3	1.63299316185545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAGCCAATGTGGGAA	NA	False	NA	NA	False	AATAAA	-14	NA	59917630	59904541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
Isoform_37842_3	chr13	-	5673	29	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	37.0824371213266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTTATCCACATTATT	NA	False	NA	-8	True	AATAAA	-17	NA	59970914	59919693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_59920674_59926565_59926630_59926950_59927016_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
Isoform_37843_3	chr13	-	5955	28	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	32.582069008129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970917	59919692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
Isoform_37844_4	chr13	-	5610	28	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	32.0229256012057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATCCACATTATTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	59970913	59919690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
Isoform_37845_5	chr13	-	5523	28	FSM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	28	318	-5	1	multi-exon	FALSE	canonical	3	16	junction_2	33.5472559435836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970933	59919692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
Isoform_37846_18	chr13	-	5890	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	21.4396428147408	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970913	59919689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
Isoform_37847_28	chr13	-	5555	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_26	20.4582125694906	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATCCACATTATTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	59970922	59919690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
Isoform_3785_9	chr10	-	2333	2	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1012	0	intron_retention	FALSE	canonical	3	31	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTAAGTCAAGCATCT	8447	False	NA	NA	False	AATAAA	-17	NA	84390214	84383280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_84385495_84390095
Isoform_37851_11	chr13	-	3445	2	FSM	ENSMUSG00000035248.10	ENSMUST00000225576.2	2499	2	30	-976	11	976	multi-exon	FALSE	canonical	3	36	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACGGTTTTGTTTTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	59970917	59966950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_59969925_59970446
Isoform_37853_9	chr13	-	3101	2	FSM	ENSMUSG00000035248.10	ENSMUST00000225179.2	619	2	12	-2494	12	976	multi-exon	FALSE	canonical	3	43	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACGGTTTTGTTTTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	59970916	59966950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_59969925_59970789
Isoform_37855_3	chr13	-	3006	2	ISM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	34	47577	1	975	5prime_fragment	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGACGGTTTTGTTTTT	NA	False	NA	-3	True	ATTAAA	-19	NA	59970927	59966951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_59969925_59970894
Isoform_37857_6	chr13	-	1431	8	NNC	ENSMUSG00000050345.10	novel	1432	8	NA	NA	8169	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	2.96922995583236	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATAGTAGGACTTCTT	1804	False	NA	NA	False	AATAAA	-12	NA	61004120	60990433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_60990791_60992122_60992241_60992893_60993057_61000913_61001139_61001329_61001477_61001569_61001693_61002626_61002764_61003959
Isoform_37859_121	chr13	-	2293	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	15	2	-11	-2	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGATCAGT	NA	False	NA	-14	True	NA	NA	NA	62530976	62516143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
Isoform_3786_11	chr10	-	2013	2	FSM	ENSMUSG00000050035.8	ENSMUST00000059383.8	3402	2	-45	1434	-45	260	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCAGCTGACCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	84938404	84933584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_84935353_84938159
Isoform_37861_15	chr13	-	2908	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	15	-613	-11	613	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGGCTGATATGCATCC	NA	False	NA	NA	False	NA	NA	NA	62530976	62515528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
Isoform_37862_3	chr13	-	2963	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	-39	-614	-39	614	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGATATGCATCCT	NA	False	NA	NA	False	NA	NA	NA	62531030	62515527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
Isoform_37864_17	chr13	-	2511	6	Fusion	ENSMUSG00000113623.2_ENSMUSG00000094942.8	novel	2310	4	NA	NA	-8	-3	multi-exon	FALSE	canonical	2	10	junction_3	56.1070405564221	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTGTGTGTGGATCAG	NA	False	NA	-15	True	NA	NA	NA	62564865	62516144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr13_-_62518166_62519376_62519438_62519623_62519751_62555228_62555290_62555482_62555610_62564751
Isoform_37866_4	chr13	-	2331	5	NNC	ENSMUSG00000094942.8	novel	2310	4	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	30.8017856625229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCTTGTGTGTGGATC	NA	False	NA	-17	True	NA	NA	NA	62530976	62516146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_62518166_62519376_62519438_62519623_62519751_62529443_62529485_62530893
Isoform_37868_219	chr13	-	1588	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	12	-967	12	419	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACGTATAAAACTTTGG	NA	False	NA	NA	False	ATTAAA	-24	NA	62564845	62549887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
Isoform_37873_6	chr13	-	2816	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	12	-2195	12	1647	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGTGTATATATTAT	NA	False	NA	NA	False	AATATA	-12	NA	62564845	62548659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
Isoform_3788_31	chr10	-	1556	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	1	10	1	-10	multi-exon	FALSE	canonical	3	41	junction_2	4.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGGAACTATTATTCC	NA	False	NA	-8	True	AATAAA	-13	NA	84963890	84955306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_84956679_84962231_84962351_84963825
Isoform_37882_9	chr13	-	2487	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	7	-2	7	2	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAGAGGTGGT	9519	False	NA	NA	False	NA	NA	NA	62614639	62600827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
Isoform_37884_29	chr13	-	2009	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	25	458	-1	-2	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTGCATATCACAGT	9537	False	NA	-6	True	NA	NA	NA	62614621	62601287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
Isoform_37885_9	chr13	-	2904	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	33	-445	-6	445	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGGACCACTTGTTT	9545	False	NA	NA	False	NA	NA	NA	62614613	62600384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
Isoform_37888_32	chr13	-	2264	4	FSM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	-115	-2	3	0	multi-exon	FALSE	canonical	3	36	junction_3	18.9267594221045	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGTGTGGACCAGTCA	NA	False	NA	NA	False	NA	NA	NA	62706440	62664608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62706300
Isoform_37889_39	chr13	-	2213	4	FSM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	-66	0	18	0	multi-exon	FALSE	canonical	3	36	junction_3	18.9267594221045	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62706391	62664610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62706300
Isoform_37890_24	chr13	-	2152	3	FSM	ENSMUSG00000074865.12	ENSMUST00000222746.2	2206	3	52	2	18	0	multi-exon	FALSE	canonical	3	31	junction_1	2.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62706391	62664610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62666545_62668231_62668359_62706300
Isoform_37892_7	chr13	-	2232	4	FSM	ENSMUSG00000072066.8	ENSMUST00000223338.2	1457	4	2	-777	2	-465	multi-exon	FALSE	canonical	3	9	junction_3	3.74165738677394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAAAGTTTGCATGTCAC	NA	False	NA	NA	False	AATAAA	-21	NA	62771992	62751291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62753195_62754939_62755001_62755186_62755314_62771851
Isoform_37894_4	chr13	-	2693	4	FSM	ENSMUSG00000072066.8	ENSMUST00000223338.2	1457	4	2	-1238	2	-4	multi-exon	TRUE	canonical	3	9	junction_3	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATTGGCTAATATCTG	NA	False	NA	NA	False	NA	NA	NA	62771992	62750830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62753195_62754939_62755001_62755186_62755314_62771851
Isoform_37896_3	chr13	-	2030	3	FSM	ENSMUSG00000072066.8	ENSMUST00000201563.4	2640	3	4	606	2	-606	multi-exon	FALSE	canonical	3	9	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCTTGTGTGTGGACC	NA	False	NA	-26	True	NA	NA	NA	62771992	62751432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62753195_62755186_62755314_62771851
Isoform_37898_26	chr13	-	2449	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	9	0	9	0	multi-exon	FALSE	canonical	3	12	junction_3	60.1461183748008	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	1	True	AATAAA	-20	NA	62832750	62819597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
Isoform_37900_44	chr13	-	2466	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-26	-1825	1	0	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	1	True	AATAAA	-20	NA	62832758	62819597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
Isoform_37903_3	chr13	-	2023	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-60	-1348	-33	406	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTGTGCGTGTACGAG	NA	False	NA	NA	False	NA	NA	NA	62832792	62820074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
Isoform_37906_6	chr13	-	2389	4	NIC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	78.7950929098168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGGGTGCATATTTG	6810	False	NA	-3	True	ATTAAA	-18	NA	62860565	62847218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_62849306_62853514_62853576_62853943_62854071_62860451
Isoform_37908_5	chr13	-	3297	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	-19	1	-19	-1	multi-exon	FALSE	canonical	3	25	junction_3	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGACTGGTATCTATCC	NA	False	NA	NA	False	NA	NA	NA	62933641	62920014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
Isoform_37909_3	chr13	-	3969	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	25	-715	1	715	multi-exon	TRUE	canonical	3	25	junction_3	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAACAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62933597	62919298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
Isoform_37911_113	chr13	-	1321	7	FSM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	27	6	27	-6	multi-exon	FALSE	canonical	3	121	junction_2	7.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATTCTTGTTATGGGT	NA	False	NA	-4	True	AATAAA	-14	NA	63006209	62984696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_62985095_62988084_62988205_62989599_62989738_62997190_62997332_63001787_63001881_63002717_63002881_63005941
Isoform_37915_5	chr13	-	888	4	ISM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	16	12288	16	4809	5prime_fragment	FALSE	canonical	3	131	junction_2	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTCAGATGTTTATCAT	NA	False	NA	NA	False	AGTAAA	-42	NA	63006220	62996978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_62997332_63001787_63001881_63002717_63002881_63005941
Isoform_37916_3	chr13	-	1350	7	FSM	ENSMUSG00000069805.11	ENSMUST00000092888.11	1479	7	122	7	-33	6	multi-exon	FALSE	canonical	0	0	junction_6	4.93288286231625	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTATTTTTTCTTTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	63035974	63012573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_63012982_63015152_63015273_63016795_63016934_63018979_63019121_63020503_63020597_63022962_63023126_63035687
Isoform_37917_3	chr13	-	2574	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.6849139389802	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579520	63459948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_63460618_63464997_63465075_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
Isoform_37918_18	chr13	-	2656	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	36.5910735927038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579520	63459948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63553910_63554070_63579263
Isoform_37919_7	chr13	-	3078	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-1	1	intron_retention	FALSE	canonical	3	10	junction_15	36.5910735927038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGACCTTCCTACTCC	NA	False	NA	-5	True	AATAAA	-19	NA	63579560	63459566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63553910_63554070_63579263
Isoform_3792_887	chr10	-	3014	13	FSM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	11	1	11	-1	multi-exon	FALSE	canonical	3	194	junction_12	27.3651999200932	887	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGTGTACTTGTGTTCA	NA	False	NA	-6	True	ATTAAA	-18	NA	85020917	84967564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
Isoform_37920_36	chr13	-	2896	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	1	214	-1	1	multi-exon	TRUE	canonical	3	59	junction_14	18.8014599954148	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGACCTTCCTACTCC	NA	False	NA	-5	True	AATAAA	-19	NA	63579537	63459566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
Isoform_37922_87	chr13	-	2504	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	11	596	9	0	multi-exon	FALSE	canonical	3	59	junction_14	18.8014599954148	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579527	63459948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
Isoform_37926_4	chr13	-	2386	15	NNC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	140	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	31.2524284770686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGAGTCCTTGTCCT	NA	False	NA	-4	True	AGTAAA	-15	NA	63578929	63459951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63578780
Isoform_37927_17	chr13	-	2540	15	NIC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	6	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	30.5478046240141	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGAGTGAGTCCTTGT	NA	False	NA	-7	True	AGTAAA	-12	NA	63579530	63459954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550892_63579263
Isoform_37930_7	chr13	-	2679	14	FSM	ENSMUSG00000021461.18	ENSMUST00000099444.10	2288	14	-11	-380	-11	0	multi-exon	FALSE	canonical	3	11	junction_13	30.2197082916227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCAGACCTTCCTACT	NA	False	NA	-7	True	AATAAA	-17	NA	63579519	63459568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63579263
Isoform_37931_4	chr13	-	2210	13	NIC	ENSMUSG00000021461.18	novel	2288	14	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	33.4974086891641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGTCCTTGTCCTCC	NA	False	NA	-2	True	AGTAAA	-17	NA	63579516	63459949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63579263
Isoform_37932_15	chr13	-	2136	12	NIC	ENSMUSG00000021461.18	novel	2288	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_11	34.1096917954438	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579536	63459948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63579263
Isoform_37933_4	chr13	-	2417	14	NIC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	35.1308627106267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579554	63459948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63545896_63545992_63548047_63548133_63550655_63550853_63579263
Isoform_37935_4	chr13	-	2357	14	NIC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	4	junction_8	33.8363622200145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579545	63459948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
Isoform_37945_5	chr13	-	7569	24	FSM	ENSMUSG00000021466.13	ENSMUST00000192155.6	7002	24	-559	-8	180	0	multi-exon	TRUE	canonical	2	4	junction_23	22.4059470906355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63712908	63656141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63712271
Isoform_37946_7	chr13	-	7831	24	NIC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	-526	0	intron_retention	FALSE	canonical	3	23	junction_23	19.6234881059468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTGTTTCTAGAATG	NA	False	NA	-1	True	AATAAA	-22	NA	63714075	63656142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713175
Isoform_37949_58	chr13	-	6809	23	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	716	0	intron_retention	FALSE	canonical	3	40	junction_22	16.0224532536208	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTGTTTCTAGAATG	NA	False	NA	-1	True	AATAAA	-22	NA	63710913	63656142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63710842
Isoform_37951_3	chr13	-	7233	22	NNC	ENSMUSG00000021466.13	novel	7725	23	NA	NA	710	0	intron_retention	FALSE	canonical	3	40	junction_21	16.3463088817922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTGTTTCTAGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	63710919	63656143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63710842
Isoform_37952_32	chr13	-	2277	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	26	0	1	0	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTATGGTTTTTGGTT	NA	False	NA	-1	True	NA	NA	NA	64277143	64244121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
Isoform_37953_43	chr13	-	1443	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	26	834	1	-1	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACAGTGTGATATTACAG	NA	False	NA	NA	False	AATAAA	-18	NA	64277143	64244955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
Isoform_37955_6	chr13	-	1382	11	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	31.255239560752	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGATATTACAGTATGAT	NA	False	NA	NA	False	AATAAA	-24	NA	64277144	64244949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64268408_64268496_64270132_64270167_64276999
Isoform_37957_5	chr13	-	2113	9	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	35.5773804544404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTATGGTTTTTGGTT	NA	False	NA	-1	True	NA	NA	NA	64277168	64244121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64276999
Isoform_37959_102	chr13	-	3500	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	23	9	23	-9	multi-exon	FALSE	canonical	3	41	junction_4	7.32717544487642	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATAAAGTACATGGGTC	6073	False	NA	NA	False	AATAAA	-17	NA	64300993	64280840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
Isoform_37963_6	chr13	-	2781	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	141	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	22.1833730712064	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64396315	64343171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
Isoform_37964_3	chr13	-	5592	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	143	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	22.1833730712064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	64396313	64340358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
Isoform_37966_6	chr13	-	3113	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	21.3508112927154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	9644	False	NA	NA	False	NA	NA	NA	64422834	64343172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
Isoform_37968_6	chr13	-	5926	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-33	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	21.3508112927154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGGTTTGTTGTATTC	9643	False	NA	NA	False	ATTAAA	-13	NA	64422835	64340360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
Isoform_37970_4	chr13	-	2790	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	87	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	17.1357268913424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	64396369	64343150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
Isoform_37971_16	chr13	-	3030	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_13	15.7570309280854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9663	False	NA	NA	False	NA	NA	NA	64422815	64343170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
Isoform_37973_12	chr13	-	5857	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_13	15.7570309280854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9648	False	NA	NA	False	ATTAAA	-15	NA	64422830	64340358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
Isoform_37975_3	chr13	-	2765	11	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	22.3427840700303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9667	False	NA	NA	False	NA	NA	NA	64422811	64343171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64422404
Isoform_37977_6	chr13	-	5592	14	FSM	ENSMUSG00000033102.16	ENSMUST00000109769.10	2886	14	107	-2813	107	0	multi-exon	FALSE	canonical	3	22	junction_2	22.3145877936915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	64396349	64340358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
Isoform_37979_10	chr13	-	3055	14	FSM	ENSMUSG00000033102.16	ENSMUST00000039318.16	5859	14	-9	2813	-9	0	multi-exon	FALSE	canonical	3	22	junction_2	21.3895954356179	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9667	False	NA	NA	False	NA	NA	NA	64422811	64343171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
Isoform_37980_108	chr13	-	2986	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	1	24	1	-3	multi-exon	TRUE	canonical	3	150	junction_1	21.3672646822189	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAAATTTTTTGTTTG	NA	False	NA	-24	True	AATAAA	-24	NA	64460523	64437634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
Isoform_37983_56	chr13	-	1655	7	NNC	ENSMUSG00000021482.11	novel	3011	6	NA	NA	1	698	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.0016339672969	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGTGGTGAAAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	64460523	64438942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_64439851_64439873_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
Isoform_37990_4	chr13	-	1544	6	NNC	ENSMUSG00000021482.11	novel	3011	6	NA	NA	-19	699	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.5139988123228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGTGGTGAAAGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	64460543	64438941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_64439851_64439873_64440043_64456635_64456742_64456906_64456961_64460080_64460150_64460306
Isoform_38002_440	chr13	-	1442	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-53	582	-53	-582	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518173	64511609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
Isoform_38003_1592	chr13	-	1389	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	0	582	0	-582	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518120	64511609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
Isoform_3801_11	chr10	-	4030	11	ISM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-74	-1	-14	-1	intron_retention	FALSE	canonical	3	192	junction_3	16.7403703662733	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752864	85727832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387
Isoform_38014_859	chr13	-	3333	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	25	474	8	9	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATTTCTGTCATTG	NA	False	NA	-6	True	AATAAA	-26	NA	65260764	65212950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
Isoform_38015_336	chr13	-	3433	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	24	375	7	108	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATTTTAAGTTTC	NA	False	NA	-9	True	ATTAAA	-11	NA	65260765	65212851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
Isoform_38016_14	chr13	-	2174	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	-7	1665	-7	248	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATGTTGGTGGTAGG	NA	False	NA	NA	False	AATAGA	-1	NA	65260796	65214141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
Isoform_38025_29	chr13	-	3626	10	FSM	ENSMUSG00000032999.11	ENSMUST00000037372.8	3527	10	-103	4	-103	1	multi-exon	FALSE	canonical	3	44	junction_9	7.43531778858738	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTACTGACTTCTAATCT	NA	False	NA	-11	True	ATTAAA	-20	NA	65353633	65324928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433
Isoform_38027_6	chr13	-	3747	10	FSM	ENSMUSG00000032999.11	ENSMUST00000037372.8	3527	10	-226	6	1	0	multi-exon	FALSE	canonical	3	44	junction_9	7.43531778858738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCTACTGACTTCTAAT	NA	False	NA	-13	True	ATTAAA	-18	NA	65353756	65324930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433
Isoform_38028_6	chr13	-	3655	11	NIC	ENSMUSG00000032999.11	novel	3527	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	17.7302002244758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGACTTCTAATCTCAAA	NA	False	NA	-7	True	ATTAAA	-24	NA	65353756	65324924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353628
Isoform_38029_31	chr13	-	3549	11	FSM	ENSMUSG00000032999.11	ENSMUST00000221659.2	3551	11	3	-1	0	0	multi-exon	FALSE	canonical	3	10	junction_10	15.0253119767944	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGACTTCTAATC	NA	False	NA	-12	True	ATTAAA	-19	NA	65353779	65324929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353752
Isoform_38030_4	chr13	-	2513	3	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-8318	6	intron_retention	FALSE	canonical	3	49	junction_2	59.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTTATCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	66138923	66124434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66126651_66126851_66126979_66138753
Isoform_38031_10	chr13	-	2931	2	ISM	ENSMUSG00000094499.4	ENSMUST00000234850.2	3029	10	-2	27225	-2	-26990	5prime_fragment	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	66549934	66526202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_66529024_66549824
Isoform_38032_181	chr13	-	2804	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-47	-170	-7	170	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-2	True	NA	NA	NA	66589186	66577780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
Isoform_38033_17	chr13	-	3724	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-47	-1090	-7	1090	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTCCTGTGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	66589186	66576860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
Isoform_38034_5	chr13	+	4136	6	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-8739	931	intron_retention	TRUE	non_canonical	0	0	junction_4	13.5499077487635	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65651752	65663723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr13_+_65651859_65658192_65658320_65658519_65658581_65659713_65660290_65660373_65660853_65660936
Isoform_38037_23	chr13	-	3996	3	ISM	ENSMUSG00000074832.12	ENSMUST00000173583.8	515	5	-11	11608	-11	170	5prime_fragment	FALSE	canonical	3	147	junction_1	23	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-2	True	NA	NA	NA	66589190	66577780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_66581540_66581739_66581867_66589080
Isoform_38038_6	chr13	-	5163	3	ISM	ENSMUSG00000074832.12	ENSMUST00000173583.8	515	5	-28	10458	-28	1320	5prime_fragment	FALSE	canonical	3	147	junction_1	23	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66589207	66576630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_66581540_66581739_66581867_66589080
Isoform_38040_7	chr13	-	1186	4	FSM	ENSMUSG00000097483.3	ENSMUST00000180403.3	1519	4	343	-10	-21	4	multi-exon	FALSE	canonical	3	52	junction_2	5.09901951359278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTTTTTCTTGAGGT	NA	False	NA	NA	False	NA	NA	NA	66667608	66651219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_66652035_66652807_66652875_66653161_66653268_66667410
Isoform_38041_10	chr13	-	1132	4	FSM	ENSMUSG00000097483.3	ENSMUST00000180403.3	1519	4	394	-7	30	1	multi-exon	FALSE	canonical	3	52	junction_2	5.09901951359278	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAACTGTTTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	66667557	66651222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_66652035_66652807_66652875_66653161_66653268_66667410
Isoform_38042_6	chr13	-	1076	3	FSM	ENSMUSG00000097483.3	ENSMUST00000181516.2	1094	3	25	-7	25	7	multi-exon	FALSE	canonical	3	13	junction_1	24	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTTTCTTGAGGTATT	NA	False	NA	NA	False	NA	NA	NA	66667562	66651216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_66652035_66653161_66653268_66667410
Isoform_38043_3	chr13	-	4082	2	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-3582	-2242	at_least_one_novel_splicesite	FALSE	canonical	3	202	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66892959	66888676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66889043_66889243
Isoform_38047_41	chr13	-	2628	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	-2164	0	882	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66950624	66939251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
Isoform_38048_4	chr13	-	550	3	ISM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	1020	0	-1020	5prime_fragment	FALSE	canonical	3	157	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTGTATAGTCTCATA	NA	False	NA	NA	False	NA	NA	NA	66950624	66942435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_66942763_66942962_66943090_66950528
Isoform_38049_3	chr13	-	3733	3	NIC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	881	intron_retention	FALSE	canonical	3	157	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-2	True	NA	NA	NA	66950624	66939252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_66942763_66942962_66943090_66950528
Isoform_3805_510	chr10	-	3914	12	FSM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-36	-1	24	-1	multi-exon	FALSE	canonical	3	181	junction_11	19.4396714593195	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752826	85727832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_38050_5	chr13	-	3835	4	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7270	301	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	29.9332590941915	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	1324	False	NA	1	True	NA	NA	NA	67010205	66997413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_67000944_67002549_67002611_67002809_67002937_67010088
Isoform_38054_2656	chr13	-	480	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	53	2	53	-2	multi-exon	FALSE	canonical	3	4784	junction_3	381.861231339344	2656	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGATTATTTGAATTC	7765	False	NA	-27	True	AATAAA	-16	NA	67053389	67048682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
Isoform_38057_14	chr13	-	1387	8	NIC	ENSMUSG00000021519.12	novel	784	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	116.048898912379	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATGTATCAGCAACTAA	425	False	NA	NA	False	AATAAA	-19	NA	67081104	67055030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_67055248_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_38058_14	chr13	-	1420	8	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	109.238178270405	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATGTTTCTGGTTTC	424	False	NA	NA	False	AATAAA	-11	NA	67081105	67060188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065233_67070819_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_38060_4	chr13	-	1543	9	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	9	20	combination_of_known_junctions	FALSE	canonical	3	3	junction_8	152.041935004787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCATTTTTCTCATAATT	386	False	NA	NA	False	AATAAA	-38	NA	67081143	67060161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67079669_67079723_67080998
Isoform_38061_259	chr13	-	1424	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	48	7	1	1	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATGTTTCTGGTTTC	425	False	NA	NA	False	AATAAA	-11	NA	67081104	67060188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_38062_60	chr13	-	1464	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	8	7	8	1	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATGTTTCTGGTTTC	385	False	NA	NA	False	AATAAA	-11	NA	67081144	67060188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_38067_14	chr13	-	3671	7	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	328	junction_5	16.739839372653	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	425	False	NA	NA	False	AATAAA	-10	NA	67081104	67060189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_38068_15	chr13	-	2357	4	FSM	ENSMUSG00000021519.12	ENSMUST00000174011.8	2353	4	-3	-1	0	1	multi-exon	FALSE	canonical	3	328	junction_2	10.2306728354819	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGGTCATTACTGTTT	424	False	NA	NA	False	AATAAA	-16	NA	67081105	67069251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_38069_5	chr13	-	2973	4	FSM	ENSMUSG00000090641.3	ENSMUST00000167565.3	3968	4	-2	997	-2	-997	multi-exon	FALSE	canonical	1	1	junction_3	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTTTATTGGATAGC	NA	False	NA	NA	False	AATAAA	-15	NA	67209236	67187656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67190297_67192821_67192918_67200350_67200478_67209126
Isoform_3807_21	chr10	-	3860	12	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	63	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	62.8899077425605	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752939	85727832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752838
Isoform_38072_9	chr13	-	4692	4	FSM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	-17	2	-17	-2	multi-exon	FALSE	canonical	3	11	junction_1	6.64997911442	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTGAGGCTGGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	67508741	67487371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67491722_67493413_67493510_67495906_67496034_67508622
Isoform_38073_4	chr13	-	1936	4	FSM	ENSMUSG00000078995.11	ENSMUST00000057070.9	4126	4	3	2187	3	-2187	multi-exon	FALSE	canonical	2	8	junction_1	8.33999733546453	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCTGCATTGGTTCT	2231	False	NA	NA	False	GATAAA	-23	NA	67523926	67513889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67515485_67520295_67520392_67520869_67520997_67523808
Isoform_38075_16	chr13	-	1455	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	28	1851	9	904	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGAAGTGTGATAAAGC	NA	False	NA	-26	True	NA	NA	NA	67569509	67555678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
Isoform_38076_5	chr13	-	1539	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	-56	1851	-56	904	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGAAGTGTGATAAAGC	NA	False	NA	-26	True	NA	NA	NA	67569593	67555678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
Isoform_38082_3	chr13	-	3711	4	NIC	ENSMUSG00000059839.10	novel	3744	4	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_3	6.59966329107444	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTTCGTGTGGTTTG	5396	False	NA	-1	True	NA	NA	NA	67632392	67619632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_67623071_67629288_67629382_67629837_67629965_67632339
Isoform_38084_46	chr13	-	2327	4	FSM	ENSMUSG00000071291.11	ENSMUST00000076123.12	2391	4	63	1	-5	-1	multi-exon	FALSE	canonical	3	37	junction_3	4.08248290463863	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTCTTTGGTCATGCC	NA	False	NA	-2	True	NA	NA	NA	67648611	67638287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648489
Isoform_38085_17	chr13	-	2329	4	FSM	ENSMUSG00000071291.11	ENSMUST00000171518.8	2300	4	-32	3	20	-2	multi-exon	FALSE	canonical	3	18	junction_3	12.657891697365	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGTCTTTGGTCATGC	NA	False	NA	-3	True	NA	NA	NA	67648654	67638288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648529
Isoform_38086_84	chr13	-	2627	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	27	2	-4	-2	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCTGGTCATAGTGTT	9249	False	NA	NA	False	NA	NA	NA	67674269	67663901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
Isoform_38087_3	chr13	-	353	2	FSM	ENSMUSG00000097333.8	ENSMUST00000181573.2	382	2	27	2	-4	-2	multi-exon	FALSE	canonical	3	52	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATGGCTATTTGGTTTG	9249	False	NA	NA	False	AATAAA	-18	NA	67674269	67669159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67669439_67674195
Isoform_38088_90	chr13	-	4004	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	692	597	0	-597	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTCATGGCATTTA	NA	False	NA	0	True	NA	NA	NA	67701257	67687356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
Isoform_38089_26	chr13	-	4599	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	692	2	0	-2	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGTGAGAACTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	67701257	67686761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
Isoform_3809_19	chr10	-	3945	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	76.6399862995812	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752801	85727829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_38092_74	chr13	-	4837	4	FSM	ENSMUSG00000058093.14	ENSMUST00000138725.3	855	4	8	-3990	8	0	multi-exon	FALSE	canonical	3	11	junction_3	22.5437845585479	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGGTGTCTCTTC	NA	False	NA	-4	True	NA	NA	NA	67757798	67737557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757661
Isoform_38094_40	chr13	-	4805	4	FSM	ENSMUSG00000058093.14	ENSMUST00000012873.16	4835	4	28	2	8	-2	multi-exon	FALSE	canonical	3	23	junction_3	17.2497987105808	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGTTTGGTGTCTCT	NA	False	NA	-6	True	NA	NA	NA	67757798	67737559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757691
Isoform_38097_36	chr13	-	5195	4	FSM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	22	4238	22	26	multi-exon	FALSE	canonical	3	9	junction_2	10.6144555520604	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTAGCCTATTTTATTT	NA	False	NA	-2	True	NA	NA	NA	67785888	67765119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67769969_67771586_67771683_67772153_67772281_67785765
Isoform_38099_12	chr13	-	4515	4	FSM	ENSMUSG00000048280.19	ENSMUST00000175821.8	652	4	-36	-3827	-1	3827	multi-exon	FALSE	canonical	3	10	junction_1	5.09901951359278	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67831671	67815558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67819731_67821116_67821213_67821680_67821808_67831551
Isoform_38101_7	chr13	-	4537	4	NNC	ENSMUSG00000048280.19	novel	13215	4	NA	NA	-2	3827	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	5.79271573232759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67831637	67815558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_67819731_67821116_67821213_67821680_67821808_67831495
Isoform_38106_53	chr13	-	3988	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	-5	-2880	-5	0	multi-exon	TRUE	canonical	3	31	junction_1	3.85861230093008	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67872450	67853427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
Isoform_38108_9	chr13	-	2220	4	FSM	ENSMUSG00000058331.16	ENSMUST00000144183.3	2312	4	92	0	10	0	multi-exon	FALSE	canonical	3	13	junction_3	2.44948974278318	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCAGTATTGTGATTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	67903255	67895918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_67897842_67899728_67899825_67900506_67900634_67903181
Isoform_3811_119	chr10	-	3934	12	FSM	ENSMUSG00000035529.11	ENSMUST00000220032.2	3962	12	25	3	25	-1	multi-exon	FALSE	canonical	3	39	junction_6	54.6866354713247	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752825	85727832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_38123_38	chr13	-	3368	16	NNC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	15	76	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	121.716318635679	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730198	68709405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68729921_68730023_68730059
Isoform_38128_430	chr13	-	3182	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	3	507	3	76	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730237	68709405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
Isoform_38129_30	chr13	-	3689	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	4	-1	4	1	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTGAGGCTTTGTGG	NA	False	NA	NA	False	ATTAAA	-26	NA	68730236	68708897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
Isoform_38135_30	chr13	-	3010	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	0	76	combination_of_known_junctions	FALSE	canonical	3	56	junction_12	89.8987596257508	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730219	68709405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
Isoform_38137_17	chr13	-	2958	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	3	56	junction_12	89.8987596257508	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCAAAAACAAAAAAAAA	NA	False	NA	-95	True	NA	NA	NA	68730248	68709486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
Isoform_38147_75	chr13	-	2808	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-4	-76	4	76	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730236	68709405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
Isoform_38149_15	chr13	-	3316	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-4	-584	4	1	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTGAGGCTTTGTGG	NA	False	NA	NA	False	ATTAAA	-26	NA	68730236	68708897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
Isoform_3815_9	chr10	-	3998	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	85.7627541535368	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752836	85727832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_38155_22	chr13	-	2654	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	4	76	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	116.868753546684	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730236	68709405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
Isoform_3816_8	chr10	-	3831	11	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	67.9223085591178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752862	85727832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_38169_44	chr13	-	4782	13	FSM	ENSMUSG00000034575.14	ENSMUST00000198607.5	4750	13	-32	0	-32	0	multi-exon	FALSE	canonical	3	61	junction_1	10.3077640640442	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTCCTCTGAAGGGTG	NA	False	NA	-13	True	AATAAA	-15	NA	69682768	69646077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
Isoform_3817_9	chr10	-	4032	12	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	64.5122834097802	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752826	85727833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739875_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_38181_21	chr13	-	2644	5	FSM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	7.15454401062709	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATTGTTTGTCTTCAT	NA	False	NA	NA	False	AATAAA	-19	NA	69759561	69721567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349_69748517_69759085
Isoform_38186_7	chr13	-	4061	7	ISM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	33241	-3	-1828	1	3prime_fragment	FALSE	canonical	3	141	junction_2	15.4569294061488	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGTGATTGTTTTATG	NA	False	NA	-6	True	AATAAA	-22	NA	70752512	70736812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297
Isoform_38187_3	chr13	-	4533	7	ISM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	32770	-4	-2299	2	3prime_fragment	FALSE	canonical	3	141	junction_2	15.4569294061488	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTGATTGTTTTATGT	NA	False	NA	-5	True	AATAAA	-23	NA	70752983	70736811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297
Isoform_38190_6	chr13	-	4190	7	ISM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	33111	-2	-1958	0	3prime_fragment	FALSE	canonical	3	141	junction_2	15.4569294061488	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGTGATTGTTTTAT	NA	False	NA	-7	True	AATAAA	-21	NA	70752642	70736813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297
Isoform_38192_3	chr13	-	4715	7	ISM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	32584	0	-2485	0	3prime_fragment	FALSE	canonical	3	141	junction_2	15.4569294061488	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTGTTGTGATTGTTTT	NA	False	NA	-9	True	AATAAA	-19	NA	70753169	70736815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297
Isoform_38193_3	chr13	-	5005	7	ISM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	32299	-5	-2770	3	3prime_fragment	FALSE	canonical	3	141	junction_2	15.4569294061488	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATTGTTTTATGTG	NA	False	NA	-4	True	AATAAA	-24	NA	70753454	70736810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297
Isoform_38196_3	chr13	-	341	2	ISM	ENSMUSG00000034525.8	ENSMUST00000222568.2	3903	12	-186	17674	-186	-17674	5prime_fragment	FALSE	canonical	3	112	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAATTATTAATACA	NA	False	NA	NA	False	AATGAA	-26	NA	70785939	70772548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_70772586_70785635
Isoform_38198_83	chr13	-	540	4	FSM	ENSMUSG00000021606.9	ENSMUST00000147407.2	534	4	-3	-3	0	-2	multi-exon	FALSE	canonical	3	341	junction_3	967.204333231723	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGAGTTGTTTCTTCC	NA	False	NA	-5	True	AATAAA	-17	NA	73476574	73467994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476396
Isoform_38199_677	chr13	-	479	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	87	2	0	-2	multi-exon	FALSE	canonical	3	2374	junction_2	33.95094500403	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGAGTTGTTTCTTCC	NA	False	NA	-5	True	AATAAA	-17	NA	73476574	73467994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
Isoform_38204_22	chr13	-	1283	3	FSM	ENSMUSG00000113346.3	ENSMUST00000223470.3	1306	3	24	-1	24	1	multi-exon	FALSE	canonical	3	37	junction_2	10.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCTGAGTTCAAATCCC	NA	False	NA	1	True	NA	NA	NA	73495479	73492782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_73493358_73494614_73495181_73495337
Isoform_38205_12	chr13	-	1308	3	NNC	ENSMUSG00000113346.3	novel	1306	3	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	18.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCTGAGTTCAAATCCC	NA	False	NA	1	True	NA	NA	NA	73495499	73492782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_73493358_73494614_73495181_73495332
Isoform_38206_5	chr13	-	4000	10	FSM	ENSMUSG00000021567.16	ENSMUST00000022051.14	4016	10	21	-5	1	5	multi-exon	FALSE	canonical	2	3	junction_1	1.49897084035912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGATGACCCTTTCTTA	NA	False	NA	NA	False	AATAAA	-22	NA	73995729	73966647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995031_73995136_73995388_73995425_73995521
Isoform_38207_12	chr13	-	2435	10	FSM	ENSMUSG00000021567.16	ENSMUST00000022051.14	4016	10	19	1562	0	-402	multi-exon	FALSE	canonical	2	3	junction_1	1.49897084035912	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGCGGTGGGTAGTGTA	NA	False	NA	NA	False	ATTAAA	-10	NA	73995731	73968214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995031_73995136_73995388_73995425_73995521
Isoform_38208_14	chr13	-	1953	10	FSM	ENSMUSG00000021567.16	ENSMUST00000022051.14	4016	10	19	2044	0	-884	multi-exon	FALSE	canonical	2	3	junction_1	1.49897084035912	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTATGTTGTAAAGTC	NA	False	NA	NA	False	AATAGA	-21	NA	73995731	73968696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995031_73995136_73995388_73995425_73995521
Isoform_38209_339	chr13	-	2205	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	81	1113	81	-2	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74085822	74060578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
Isoform_38210_20	chr13	-	2492	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	-207	1114	-207	-3	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTCTTATTTTTATTC	NA	False	NA	-23	True	ATTAAA	-11	NA	74086110	74060579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
Isoform_38211_135	chr13	-	2314	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	-8	1093	-8	18	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCTGCTTCAAGTGCTG	NA	False	NA	-2	True	ATTAAA	-32	NA	74085911	74060558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
Isoform_38212_287	chr13	-	2288	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	19	1092	19	19	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTGCTTCAAGTGCTGT	NA	False	NA	-1	True	ATTAAA	-33	NA	74085884	74060557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
Isoform_38213_30	chr13	-	2465	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	-178	1112	-178	-1	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTATTTTTATTCTA	NA	False	NA	-21	True	ATTAAA	-13	NA	74086081	74060577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
Isoform_38227_57	chr13	-	2511	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	-2	1132	-2	0	multi-exon	FALSE	canonical	3	27	junction_5	28.6590098045136	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210420	74185750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_38231_10	chr13	-	3090	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	-313	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTAGTTGAGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	74210420	74184931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_38232_73	chr13	-	2271	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210420	74185750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_38235_70	chr13	-	2333	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGGTTCACTCTTTTT	NA	False	NA	0	True	NA	NA	NA	74210420	74185751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_38239_9	chr13	-	3536	11	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	100	junction_7	14.9946657181812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210420	74185750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_38243_4	chr13	-	1995	5	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	1284	intron_retention	FALSE	canonical	3	100	junction_1	20.0919760103381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTGAGTCCTTTGTCC	NA	False	NA	NA	False	AATAAA	-40	NA	74210420	74199731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_38247_72	chr13	-	3208	13	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	43	5	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	65.7558615891643	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCTTGGTGTGATGTC	7216	False	NA	-6	True	ATTAAA	-16	NA	74356785	74320112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
Isoform_38248_523	chr13	-	2397	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	21	2504	21	7	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGTGTGATGTCAG	7194	False	NA	-4	True	ATTAAA	-18	NA	74356807	74320110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
Isoform_38249_23	chr13	-	4587	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	21	314	21	-314	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTAGAGCTCTGCCTTGT	7194	False	NA	-7	True	AATAAA	-16	NA	74356807	74317920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
Isoform_38256_455	chr13	-	1060	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	71	0	-34	0	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGCTGGTTTTTTGCT	NA	False	NA	1	True	AATAAA	-25	NA	74465369	74451627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
Isoform_38257_8	chr13	-	1144	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	-23	10	-23	-2	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCCTAGTTTTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	74465463	74451637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
Isoform_38259_7	chr13	-	1088	6	FSM	ENSMUSG00000021576.7	ENSMUST00000222759.2	1376	6	286	2	-10	-2	multi-exon	FALSE	canonical	3	148	junction_2	263.104085867172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCCTAGTTTTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	74465413	74451637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74452168_74453659_74453770_74457808_74457962_74459786_74459832_74464448_74464511_74465225
Isoform_38260_97	chr13	-	1064	6	FSM	ENSMUSG00000021576.7	ENSMUST00000222759.2	1376	6	313	-1	17	1	multi-exon	FALSE	canonical	3	148	junction_2	263.104085867172	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTAGTTTTGGCTGGTT	NA	False	NA	-6	True	AATAAA	-18	NA	74465386	74451634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74452168_74453659_74453770_74457808_74457962_74459786_74459832_74464448_74464511_74465225
Isoform_38261_7	chr13	-	5129	5	NIC	ENSMUSG00000021576.7	novel	1376	6	NA	NA	-10	0	intron_retention	FALSE	canonical	3	753	junction_1	31.4085975490788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTAGTTTTGGCTGGT	NA	False	NA	-7	True	AATAAA	-17	NA	74465413	74451635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74452168_74453659_74457962_74459786_74459832_74464448_74464511_74465225
Isoform_38294_2577	chr13	-	2857	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	42	1	1	-1	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	2577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGGTCAAGGTGTTC	NA	False	NA	-9	True	NA	NA	NA	74498357	74470373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
Isoform_38309_13	chr13	-	4142	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	14	-3	14	3	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTTTTGGTTGTGTTTTC	NA	False	NA	-1	True	NA	NA	NA	74538941	74517441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
Isoform_38315_3	chr13	-	2458	4	NIC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	9	510	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	17.6823829464998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCATTGTTGTATATTA	NA	False	NA	NA	False	AATAAA	-16	NA	74538946	74519034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74520947_74524554_74524682_74526730_74526986_74538782
Isoform_38316_12	chr13	-	4002	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	0	-2388	0	2388	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGACTCTCCAGTTAC	6469	False	NA	NA	False	ATTAAA	-20	NA	74610838	74593002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
Isoform_38318_3	chr13	-	6982	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	24	-5392	0	5392	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCACGTGCCATTGTCT	6493	False	NA	NA	False	NA	NA	NA	74610814	74589998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
Isoform_38319_31	chr13	-	1516	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	31	2	9	-2	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGCCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	74642080	74628177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
Isoform_3832_3260	chr10	-	1984	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	28	-3	28	3	multi-exon	FALSE	canonical	3	1317	junction_1	96.7988457003782	3260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTCTTCCTGTGTCA	NA	False	NA	-9	True	ATTAAA	-20	NA	85793659	85774497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
Isoform_38321_4	chr13	-	6082	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	14	-4547	-8	4544	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCTCATTTTTTCTAG	NA	False	NA	NA	False	ATTAAA	-14	NA	74642097	74623628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
Isoform_38322_10	chr13	-	3194	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	31	-1676	9	1673	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCCTGCTGTGATCACT	NA	False	NA	NA	False	AATAAA	-18	NA	74642080	74626499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
Isoform_38325_5	chr13	-	1675	6	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	-230	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	26.2022899762597	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74642341	74628175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968_74642054_74642157
Isoform_38326_11	chr13	-	3069	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	9	-1672	9	1672	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCCTGCTGTGATCAC	NA	False	NA	NA	False	AATAAA	-17	NA	74642080	74626500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
Isoform_38327_4	chr13	-	1943	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	-14	-523	8	523	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGACTCTCCAGTTAC	NA	False	NA	NA	False	ATTAAA	-20	NA	74642103	74627649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
Isoform_38328_20	chr13	-	1394	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	9	3	9	0	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74642080	74628175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
Isoform_38329_18	chr13	-	3209	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	-26	-2788	-26	2788	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74670606	74654928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
Isoform_38331_26	chr13	-	2012	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	-34	-1583	-34	1583	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	74670614	74656133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
Isoform_38333_3	chr13	-	2126	5	NNC	ENSMUSG00000113019.2	novel	395	4	NA	NA	-26	1581	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	33.0265045077435	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	74670606	74656135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_74657816_74659212_74659274_74659474_74659602_74660551_74660676_74670472
Isoform_38335_33	chr13	-	3413	4	ISM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	377	-2773	-5	2583	3prime_fragment	FALSE	canonical	3	33	junction_3	16.8720676464584	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTGACTCTCCAGTT	NA	False	NA	-2	True	ATTAAA	-18	NA	74711998	74699445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857
Isoform_38337_15	chr13	-	4582	4	ISM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	387	-3952	5	3762	3prime_fragment	FALSE	canonical	3	33	junction_3	16.8720676464584	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCCTGCTGTGATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	74711988	74698266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857
Isoform_38340_11	chr13	-	3474	5	FSM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	3	-2773	3	2583	multi-exon	FALSE	canonical	3	16	junction_4	21.3658606192215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTGACTCTCCAGTT	NA	False	NA	-2	True	ATTAAA	-18	NA	74712372	74699445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857_74711944_74712256
Isoform_38341_3	chr13	-	3632	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18623	3078	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	25.5868618630734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739530	74724398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74739390
Isoform_38343_14	chr13	-	3489	4	NIC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18642	3078	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	25.3508711224421	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739511	74724398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74727579_74728971_74729033_74729232_74729360_74739390
Isoform_38344_8	chr13	-	3727	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18630	3077	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	30.2200264725232	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	74739523	74724399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74731765_74731993_74739390
Isoform_38345_5	chr13	-	3373	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220929.2	1179	6	1	-2195	1	3	multi-exon	FALSE	canonical	3	7	junction_4	38.8453343401753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGTCATGATGTCTAT	5219	False	NA	-2	True	NA	NA	NA	74765428	74753060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761068_74765320
Isoform_38346_13	chr13	-	3468	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220478.2	1989	6	361	-1840	-31	0	multi-exon	FALSE	canonical	3	17	junction_3	36.0366480128216	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5187	False	NA	-5	True	NA	NA	NA	74765460	74753063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320
Isoform_38348_73	chr13	-	3320	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	244	-2193	-6	1	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCATGGTCATGATGTCT	5212	False	NA	-4	True	NA	NA	NA	74765435	74753062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
Isoform_38349_25	chr13	-	3713	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	-151	-2191	-9	-1	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	4817	False	NA	-6	True	NA	NA	NA	74765830	74753064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
Isoform_38350_6	chr13	-	4986	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	259	-3874	9	1682	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGCTGTGATCAC	5227	False	NA	NA	False	AATAAA	-17	NA	74765420	74751381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
Isoform_38352_3	chr13	-	3610	6	NIC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	6	junction_5	35.3236464708841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	4818	False	NA	-6	True	NA	NA	NA	74765829	74753064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320_74765407_74765508
Isoform_38354_3	chr13	-	3622	4	FSM	ENSMUSG00000113204.2	ENSMUST00000221506.2	1288	4	382	-2716	-10	524	multi-exon	FALSE	canonical	3	22	junction_3	33.95094500403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	5208	False	NA	NA	False	ATTAAA	-19	NA	74765439	74752539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74765320
Isoform_38355_6	chr13	-	2832	30	FSM	ENSMUSG00000021585.11	ENSMUST00000223033.2	2857	30	8	17	8	-5	multi-exon	FALSE	canonical	3	30	junction_7	32.8082020428457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTTCCTGCCTGAAC	NA	False	NA	NA	False	AATAAA	-40	NA	74918760	74842378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
Isoform_38356_4	chr13	-	3033	32	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-35	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_31	41.0258668181305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCCTGAACTCTACT	NA	False	NA	NA	False	NA	NA	NA	74956093	74842372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74955937
Isoform_38357_4	chr13	-	3114	32	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-139	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	37.865581855849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTACTTTCTTAGGAATG	NA	False	NA	NA	False	NA	NA	NA	74956779	74842360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
Isoform_38359_4	chr13	-	2756	29	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	26.471658891913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTACTTTCTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	74918725	74842362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
Isoform_38360_3	chr13	-	4700	29	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	26.471658891913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCTTGGCTATGTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	74918794	74840487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
Isoform_38361_6	chr13	-	3063	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	140	-3	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	33.9593875091999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACTCTACTTTCTTAGG	NA	False	NA	NA	False	NA	NA	NA	74956789	74842364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
Isoform_38363_13	chr13	-	2838	30	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	13	3	combination_of_known_junctions	FALSE	canonical	3	49	junction_27	26.473283146802	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCCTGAACTCTACTTT	NA	False	NA	NA	False	NA	NA	NA	74918755	74842370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
Isoform_38366_6	chr13	-	3007	32	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-12	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_31	37.1226557681413	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTTCCTGCCTGAAC	NA	False	NA	NA	False	AATAAA	-40	NA	74956070	74842378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74955937
Isoform_38367_18	chr13	-	3095	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	154	1892	-135	-5	multi-exon	FALSE	canonical	3	49	junction_27	33.4677691410694	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTTCCTGCCTGAAC	NA	False	NA	NA	False	AATAAA	-40	NA	74956775	74842378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
Isoform_38368_5	chr13	-	4992	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	149	0	-140	0	multi-exon	FALSE	canonical	3	49	junction_27	33.4677691410694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74956780	74840486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
Isoform_38370_38	chr13	-	2774	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	105	1886	18	1	multi-exon	FALSE	canonical	3	102	junction_28	16.6207701385947	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCCTGAACTCTACT	NA	False	NA	NA	False	NA	NA	NA	74918750	74842372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
Isoform_38371_12	chr13	-	2387	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	83	2295	-4	0	multi-exon	FALSE	canonical	3	102	junction_28	16.6207701385947	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCTGTATTGAGT	NA	False	NA	-6	True	AATGAA	-13	NA	74918772	74842781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
Isoform_38373_10	chr13	-	2850	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	31	1884	31	3	multi-exon	FALSE	canonical	3	102	junction_28	16.6207701385947	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCCTGAACTCTACTTT	NA	False	NA	NA	False	NA	NA	NA	74918824	74842370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
Isoform_38374_10	chr13	-	4660	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	105	0	18	0	multi-exon	TRUE	canonical	3	102	junction_28	16.6207701385947	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74918750	74840486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
Isoform_38376_5	chr13	-	2967	31	FSM	ENSMUSG00000021585.11	ENSMUST00000065629.6	2910	31	-23	-34	-23	1	multi-exon	FALSE	canonical	3	15	junction_30	32.8517883835873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCCTGAACTCTACT	NA	False	NA	NA	False	NA	NA	NA	74956081	74842372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74955937
Isoform_38377_21	chr13	-	3040	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-121	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTACTTTCTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	74956761	74842362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
Isoform_38378_9	chr13	-	2649	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	140	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCTGTATTGAGT	NA	False	NA	-6	True	AATGAA	-13	NA	74956789	74842781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
Isoform_3838_3	chr10	-	8707	15	NNC	ENSMUSG00000059602.15	novel	2360	14	NA	NA	4	6371	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.63038745864476	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAGTCCGAAAATCA	NA	False	NA	NA	False	AATAAA	-19	NA	86334742	85884617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_85887157_85887202_85891529_85893234_85893527_85899825_85899914_85900659_85900795_85904889_85904993_85909089_85909165_85916070_85916214_85970849_85970913_86187414_86187505_86190209_86190367_86243476_86243569_86284729_86284788_86302842_86303300_86334653
Isoform_38380_3	chr13	-	4933	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-140	-2	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTCTTGGCTATGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	74956780	74840488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
Isoform_38382_197	chr13	-	5004	12	FSM	ENSMUSG00000021589.14	ENSMUST00000022078.12	4980	12	-33	9	25	-9	multi-exon	FALSE	canonical	3	85	junction_5	11.3494456849386	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAGTTCAATGAAG	6613	False	NA	NA	False	AATAAA	-11	NA	76092019	76017664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
Isoform_38387_3	chr13	-	1654	5	FSM	ENSMUSG00000021589.14	ENSMUST00000109606.3	1676	5	19	3	19	-3	multi-exon	FALSE	canonical	3	92	junction_4	10.5948100502085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGGGTCGTTTTAT	6607	False	NA	NA	False	AATAAA	-21	NA	76092025	76060863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
Isoform_38388_30	chr13	-	1568	4	FSM	ENSMUSG00000043190.15	ENSMUST00000050997.2	2807	4	2	1237	2	-5	multi-exon	FALSE	canonical	3	34	junction_3	20.2703943940144	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAGTAATTTT	NA	False	NA	-14	True	NA	NA	NA	76166679	76150890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76165639
Isoform_38389_10	chr13	-	1105	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	79	252	-29	-5	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAGTAATTTT	NA	False	NA	-14	True	NA	NA	NA	76166710	76150890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
Isoform_38391_3	chr13	-	610	4	FSM	ENSMUSG00000043190.15	ENSMUST00000167271.9	595	4	-20	5	-20	-5	multi-exon	FALSE	canonical	2	9	junction_3	32.0555074137902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAGTAATTTT	NA	False	NA	-14	True	NA	NA	NA	76166858	76150890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166776
Isoform_38392_10	chr13	-	3214	8	FSM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	5	438	5	-438	multi-exon	TRUE	canonical	3	9	junction_3	7.18558647997674	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATCAATCTCTATTTT	9781	False	NA	NA	False	AATAAA	-33	NA	76246774	76208978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76239776_76239937_76242006_76242137_76246492
Isoform_38394_98	chr13	-	3747	21	FSM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	-5	5	-5	-5	multi-exon	FALSE	canonical	3	56	junction_14	27.7961777947976	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTTTCATAGTCTTT	NA	False	NA	-7	True	AATAAA	-17	NA	77283597	77191211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
Isoform_38395_10	chr13	-	3590	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	34.3358836872922	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTTTCATAGTCTTT	NA	False	NA	-7	True	AATAAA	-17	NA	77283584	77191211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
Isoform_38396_17	chr13	-	3590	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	35.2448499214194	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTTTCATAGTCTTT	NA	False	NA	-7	True	AATAAA	-17	NA	77283584	77191211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
Isoform_38397_11	chr13	-	3444	19	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	34.6410161513775	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTTTCATAGTCTTT	NA	False	NA	-7	True	AATAAA	-17	NA	77283582	77191211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
Isoform_384_29	SIRV12002	+	11999	1	FSM	SIRV12002A	SIRV12002	11999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV12002_+_0_12000
Isoform_38400_4	chr13	-	2446	11	ISM	ENSMUSG00000069170.15	ENSMUST00000126444.8	3823	19	-36	12587	-21	4277	5prime_fragment	FALSE	canonical	1	2	junction_1	15.4220621189256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTCGGGCATTTTTG	2336	False	NA	NA	False	AATAAA	-20	NA	81781294	81721277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_81721558_81723077_81723255_81726181_81726512_81726838_81727116_81727403_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
Isoform_38402_8	chr13	-	1613	7	FSM	ENSMUSG00000069170.15	ENSMUST00000146749.2	1592	7	-19	-2	-6	2	multi-exon	FALSE	canonical	3	24	junction_1	8.51958527942137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAAGTGTATATGACA	2351	False	NA	NA	False	AATAAA	-20	NA	81781279	81727157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
Isoform_38406_614	chr13	-	3042	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	13	-1	2	1	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATTTGCAGTGAACAT	NA	False	NA	-5	True	AATAAA	-19	NA	81859119	81821960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
Isoform_38407_14	chr13	-	3379	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	-325	0	-325	0	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTTGCAGTGAACA	NA	False	NA	-6	True	AATAAA	-18	NA	81859457	81821961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
Isoform_38416_8	chr13	-	800	3	FSM	ENSMUSG00000035834.12	ENSMUST00000161920.2	733	3	-57	-10	0	10	multi-exon	FALSE	canonical	3	281	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTACTGCCATTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	81859121	81842391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_81842897_81847862_81848013_81858976
Isoform_38418_80	chr13	-	4326	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-58	295	43	-295	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGATTAGCTTACTAT	NA	False	NA	-7	True	AATAAA	-17	NA	85437206	85363193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
Isoform_38419_81	chr13	-	4063	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-59	559	42	156	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTGACCATTTTATA	NA	False	NA	-9	True	AATAAA	-34	NA	85437207	85363457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
Isoform_38425_18	chr13	-	4641	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-64	-14	37	14	multi-exon	TRUE	canonical	3	186	junction_11	23.7235232534199	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTCGATTGTATTTCT	NA	False	NA	NA	False	AATAAA	-43	NA	85437212	85362884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
Isoform_38426_50	chr13	-	4619	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-351	295	-250	-295	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGATTAGCTTACTAT	NA	False	NA	-7	True	AATAAA	-17	NA	85437499	85363193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
Isoform_38427_5	chr13	-	4442	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-439	560	-338	155	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCATTTGACCATTTTAT	NA	False	NA	-10	True	AATAAA	-33	NA	85437587	85363458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
Isoform_38428_11	chr13	-	4908	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-339	-6	-238	6	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCATAAAGCATTCGATT	NA	False	NA	NA	False	AATAAA	-35	NA	85437487	85362892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
Isoform_38436_53	chr13	-	382	3	FSM	ENSMUSG00000017778.15	ENSMUST00000017922.9	315	3	8	-75	8	1	multi-exon	FALSE	canonical	3	419	junction_2	5048	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCAATGCCTCGTCTC	NA	False	NA	-18	True	AATAAA	-12	NA	86194885	86192938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_86193028_86193845_86193973_86194719
Isoform_38437_3182	chr13	-	422	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	114	4	-16	1	multi-exon	FALSE	canonical	3	10515	junction_1	2196	3182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCAATGCCTCGTCTC	NA	False	NA	-18	True	AATAAA	-12	NA	86194909	86192938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_86193028_86193845_86193989_86194719
Isoform_38438_34	chr13	-	483	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	61	-4	61	4	multi-exon	FALSE	canonical	3	10515	junction_1	2196	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTCGTCTCTGCAATAA	NA	False	NA	-10	True	AATAAA	-20	NA	86194962	86192930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_86193028_86193845_86193989_86194719
Isoform_38442_11	chr13	-	7894	14	FSM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-241	679	-54	-2	multi-exon	FALSE	canonical	3	34	junction_8	8.56786344567119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTTTCAGCCTATCT	2552	False	NA	-5	True	AATAAA	-25	NA	89890682	89805137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
Isoform_38443_3	chr13	-	8687	14	FSM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-241	-114	-54	114	multi-exon	TRUE	canonical	3	34	junction_8	8.56786344567119	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGATTTAATTTATTGGAT	2552	False	NA	NA	False	AATAAA	-14	NA	89890682	89804344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
Isoform_38446_3	chr13	-	3811	6	FSM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-262	-1276	-71	733	multi-exon	FALSE	canonical	3	48	junction_2	6.6932802122726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTGTTCTAATGACCT	2535	False	NA	NA	False	AATAAA	-12	NA	89890699	89858068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
Isoform_38447_3	chr13	-	2056	3	ISM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-246	12950	-55	1258	5prime_fragment	FALSE	canonical	3	54	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAAAGTTAAAAAG	2551	False	NA	NA	False	NA	NA	NA	89890683	89872294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_89873783_89879577_89879654_89890191
Isoform_38448_8	chr13	-	1529	8	NIC	ENSMUSG00000021615.14	novel	1540	8	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	49.108792180095	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGTTATTTAACTGA	NA	False	NA	-6	True	AATAAA	-15	NA	90237228	89997038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237128
Isoform_38449_89	chr13	-	1468	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	73	-1	1	1	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGTTATTTAACTGA	NA	False	NA	-6	True	AATAAA	-15	NA	90237654	89997038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
Isoform_38450_12	chr13	-	1500	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	41	-1	-31	1	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGTTATTTAACTGA	NA	False	NA	-6	True	AATAAA	-15	NA	90237686	89997038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
Isoform_38451_3	chr13	-	1107	8	FSM	ENSMUSG00000021619.7	ENSMUST00000022119.6	1583	8	0	476	0	37	multi-exon	FALSE	canonical	3	10	junction_7	11.5121940673747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGAGCAATGGATTAT	NA	False	NA	NA	False	AATAAA	-35	NA	91372087	91083950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91372057
Isoform_38453_13	chr13	-	1236	8	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	6065	35	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	7.14856914468389	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAGGAGCAATGGATT	4945	False	NA	NA	False	AATAAA	-33	NA	91366013	91083952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91365852
Isoform_38457_3	chr13	-	2751	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	7	-1217	7	1217	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91955817	91943434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
Isoform_38458_177	chr13	-	1531	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	10	0	10	0	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955814	91944651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
Isoform_38461_4	chr13	-	4973	3	NIC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	17	0	intron_retention	FALSE	canonical	3	139	junction_2	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955807	91944651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_91949136_91953869_91954280_91955728
Isoform_38463_3	chr13	-	5316	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	7	827	7	-88	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCTCAAATTTCATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	92667369	92624442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
Isoform_38465_9	chr13	-	6085	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	49	16	49	-16	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTACATATCAGGC	NA	False	NA	NA	False	AATAAA	-28	NA	92667327	92623631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
Isoform_38467_9	chr13	-	5907	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	49	194	49	-194	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTCTGTGTAAGAAGG	NA	False	NA	NA	False	ATTAAA	-34	NA	92667327	92623809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
Isoform_38468_5	chr13	-	5935	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	49	-4	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	9.64931992422264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGCTCATTTTGTTTA	NA	False	NA	NA	False	AATAAA	-40	NA	92667327	92623619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
Isoform_38474_64	chr13	-	1976	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	-15	1120	-15	216	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTGAAAATGTTTACA	NA	False	NA	NA	False	AATAAA	-21	NA	93328908	93283909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_38475_12	chr13	-	3109	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	-30	2	-30	-1	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGTTGAGGTGTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	93328923	93282791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_38476_32	chr13	-	3083	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	0	-2	0	2	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGAGGTGTTATTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	93328893	93282787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_38487_129	chr13	-	3108	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-117	-1	-15	0	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGAGGTGTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	93328908	93282789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_38489_184	chr13	-	1983	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-117	1124	-15	211	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTATTTTTGAAAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	93328908	93283914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_38490_10	chr13	-	3147	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-151	-6	-49	5	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGTGTTATTTTTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	93328942	93282784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_38494_17	chr13	-	2014	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-151	1127	-49	208	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATGTATTTTTGAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	93328942	93283917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_38498_8	chr13	-	2359	6	ISM	ENSMUSG00000021690.11	ENSMUST00000065537.9	8776	11	-12	23296	-12	10180	5prime_fragment	TRUE	canonical	0	0	junction_3	1.01980390271856	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAGTATTGAAATC	1475	False	NA	NA	False	AAGAAA	-13	NA	93636328	93589904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_93590084_93590435_93590602_93596127_93596298_93601074_93601226_93609128_93609303_93634809
Isoform_38499_10	chr13	-	2195	5	ISM	ENSMUSG00000021690.11	ENSMUST00000065537.9	8776	11	-28	23828	-28	9648	5prime_fragment	FALSE	canonical	0	0	junction_2	0.82915619758885	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGTGTGCATTTAACC	1459	False	NA	NA	False	NA	NA	NA	93636344	93590436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_93590602_93596127_93596298_93601074_93601226_93609128_93609303_93634809
Isoform_385_3	SIRV12002	-	1427	1	Antisense	novelGene_SIRV12002A_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1428	1	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_SIRV12002_-_0_1400
Isoform_38501_19	chr13	-	1954	8	FSM	ENSMUSG00000074768.7	ENSMUST00000099309.6	2490	8	315	221	-80	-221	multi-exon	FALSE	canonical	1	3	junction_5	5.15474815790535	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTTTGTGGTCCAT	NA	False	NA	NA	False	AATAAA	-25	NA	93774154	93753403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_93754171_93756589_93756819_93757901_93758085_93761321_93761470_93761804_93761997_93763754_93763874_93769743_93769877_93773971
Isoform_38503_10	chr13	-	1911	8	FSM	ENSMUSG00000042118.8	ENSMUST00000015941.8	2467	8	17	539	17	-539	multi-exon	FALSE	canonical	3	8	junction_1	2.60298102261266	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTGAGTAGCTTGAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	93810793	93792766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93803081_93803274_93805762_93805855_93807920_93808054_93810745
Isoform_38504_214	chr13	-	3646	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	490	123	490	-123	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTGTATAATTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	94421847	94337940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
Isoform_38507_8	chr13	-	3791	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	343	125	343	-125	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGTTTGTATAATTT	NA	False	NA	-3	True	AATAAA	-14	NA	94421994	94337942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
Isoform_38509_4	chr13	-	3580	8	NIC	ENSMUSG00000021687.15	novel	4259	9	NA	NA	457	-123	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	36.0753180364161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTGTATAATTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	94421880	94337940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94389500_94389579_94421727
Isoform_38510_3	chr13	-	932	4	ISM	ENSMUSG00000021684.18	ENSMUST00000162882.2	2060	9	12897	606	1084	167	3prime_fragment	TRUE	canonical	1	2	junction_3	2.44948974278318	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTCAGTGACAAAACGAG	NA	False	NA	NA	False	AATAAA	-17	NA	95169677	95162443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_95162738_95164125_95164256_95166820_95166989_95169337
Isoform_38516_687	chr13	-	3245	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	-2	6	-2	-6	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATATTGGTCTTCTTTGT	NA	False	NA	21	True	AATAAA	-44	NA	95511862	95487196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
Isoform_38525_217	chr13	-	2739	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	2	0	2	0	multi-exon	FALSE	canonical	3	40	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGTT	9828	False	NA	NA	False	AATAAA	-16	NA	95661733	95648239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_95650790_95661544
Isoform_38526_28	chr13	-	2801	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	-60	0	-60	0	multi-exon	FALSE	canonical	3	40	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGTT	9766	False	NA	NA	False	AATAAA	-16	NA	95661795	95648239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_95650790_95661544
Isoform_38529_3	chr13	-	2921	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	-179	-1	-179	1	multi-exon	FALSE	canonical	3	40	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAAGTTC	9647	False	NA	NA	False	AATAAA	-17	NA	95661914	95648238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_95650790_95661544
Isoform_38530_3	chr13	-	2702	2	NNC	ENSMUSG00000021678.10	novel	2741	2	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGTT	9623	False	NA	NA	False	AATAAA	-16	NA	95661938	95648239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_95650790_95661786
Isoform_38531_195	chr13	-	3350	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	6	-20	6	20	multi-exon	FALSE	canonical	3	48	junction_1	0	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGATTGTTCCTGTGGG	NA	False	NA	NA	False	AATAAA	-23	NA	95754989	95738290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_95741446_95754794
Isoform_38538_31	chr13	-	5894	36	FSM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	-50	3	-50	-3	multi-exon	FALSE	canonical	3	39	junction_26	10.4750042618471	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGGTAGAGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	96028553	95763684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
Isoform_38539_67	chr13	-	5862	36	FSM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	-18	3	-18	-3	multi-exon	FALSE	canonical	3	39	junction_26	10.4750042618471	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGGTAGAGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	96028521	95763684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
Isoform_38543_3	chr13	-	5538	36	NNC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	-67	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	14.3772496021474	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGGTAGAGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	96028570	95763684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028544
Isoform_38551_12	chr13	-	4270	15	FSM	ENSMUSG00000021668.16	ENSMUST00000022172.12	4225	15	-46	1	-46	-1	multi-exon	FALSE	canonical	3	26	junction_7	5.85191404236116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTATTGACTGTCATA	NA	False	NA	NA	False	AATAAA	-19	NA	96679039	96617198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
Isoform_38553_28	chr13	-	4221	15	FSM	ENSMUSG00000021668.16	ENSMUST00000022172.12	4225	15	-4	8	-4	-8	multi-exon	FALSE	canonical	3	26	junction_7	5.85191404236116	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTACACTTATTGAC	NA	False	NA	NA	False	AATAAA	-12	NA	96678997	96617205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
Isoform_38554_9	chr13	-	3337	14	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	10.888352171828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTGACTGTCATATT	NA	False	NA	NA	False	AATAAA	-21	NA	96679019	96617196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_96618763_96618965_96619000_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
Isoform_38555_3	chr13	-	2536	13	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-4	-31	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11.6749970259335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAATAGTGAAGGTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	96678997	96620055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_96620914_96623352_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
Isoform_38586_959	chr13	-	4366	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	61	-2	0	2	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTAAGCAGTGGCTTT	NA	False	NA	-3	True	AGTAAA	-24	NA	96807383	96785472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
Isoform_38589_28	chr13	-	4409	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	18	-2	18	2	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTAAGCAGTGGCTTT	NA	False	NA	-3	True	AGTAAA	-24	NA	96807426	96785472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
Isoform_38606_43	chr13	-	2605	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	89	6	4	-6	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTTTTGTGTGGTCT	NA	False	NA	NA	False	AATAAA	-8	NA	97274356	97265937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
Isoform_38607_415	chr13	-	1043	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	89	1568	4	-8	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTTAGTTTGGGGCATA	NA	False	NA	NA	False	AATAAA	-20	NA	97274356	97267499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
Isoform_38608_62	chr13	-	1092	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	40	1568	-24	-8	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTTAGTTTGGGGCATA	NA	False	NA	NA	False	AATAAA	-20	NA	97274405	97267499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
Isoform_38631_3642	chr13	-	1792	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	28	85	28	-85	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	3642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTATCCCTGAATCA	NA	False	NA	-19	True	AATAAA	-20	NA	97334837	97312923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
Isoform_38632_195	chr13	-	1872	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	28	5	28	-5	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGGGCTGCCCTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	97334837	97312843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
Isoform_38633_154	chr13	-	1832	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	-12	85	-12	-85	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTATCCCTGAATCA	NA	False	NA	-19	True	AATAAA	-20	NA	97334877	97312923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
Isoform_38653_269	chr13	-	4086	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	59	-25	31	25	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAAGTAGTTTCTCAG	NA	False	NA	-28	True	ATTAAA	-23	NA	98399490	98383327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_38654_49	chr13	-	4109	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	35	-24	7	24	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGAAGTAGTTTCTCA	NA	False	NA	-29	True	ATTAAA	-22	NA	98399514	98383328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_38657_117	chr13	-	2702	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	35	1383	7	-1383	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399514	98384735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_38658_402	chr13	-	2680	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	58	1382	30	-1382	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGAGGTGTTCCTGAT	NA	False	NA	-2	True	TATAAA	-20	NA	98399491	98384734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_38661_12	chr13	-	3424	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	5	691	5	-691	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTGCTGTCCTTATCATT	NA	False	NA	NA	False	ATTAAA	-16	NA	98399544	98384043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_38678_306	chr13	-	893	6	FSM	ENSMUSG00000021660.15	ENSMUST00000022163.15	1091	6	197	1	197	0	multi-exon	FALSE	canonical	3	579	junction_5	2432.68485422999	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453278	98446404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453132
Isoform_38680_5578	chr13	-	863	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	25	0	-14	0	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	5578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453489	98446404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
Isoform_38690_364	chr13	-	4844	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	3	213	junction_9	37.5658568383579	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAATTGACTTTGTGCCT	NA	False	NA	-9	True	AATAAA	-17	NA	98951684	98859915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
Isoform_38691_22	chr13	-	3486	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	213	junction_9	37.5658568383579	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATCCTGTCTCATTTC	NA	False	NA	NA	False	ACTAAA	-15	NA	98951739	98861328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
Isoform_38695_11	chr13	-	5040	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	78	-4	at_least_one_novel_splicesite	FALSE	non_canonical	3	213	junction_9	37.5658568383579	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951879	98859914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
Isoform_38699_6	chr13	-	4840	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-29	5	at_least_one_novel_splicesite	TRUE	non_canonical	3	11	junction_23	59.4581435409258	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCCTTTGTGTCCCT	NA	False	NA	1	True	AATAAA	-27	NA	98951745	98859905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98942813_98942906_98951583
Isoform_38701_11	chr13	-	4873	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	3	213	junction_9	37.5658568383579	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951712	98859914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
Isoform_38703_7	chr13	-	2005	15	NNC	ENSMUSG00000041685.17	novel	1927	15	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	239	junction_4	34.6145687153103	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	98951740	98887743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_98888440_98888841_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
Isoform_38728_24	chr13	-	3419	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	12	5014	12	3025	multi-exon	FALSE	canonical	3	24	junction_23	103.521017838	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACCCTGTGACATGCC	NA	False	NA	-13	True	AATAAA	-21	NA	99027536	98980540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027422
Isoform_38731_220	chr13	-	3407	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	3025	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACCCTGTGACATGCC	NA	False	NA	-13	True	AATAAA	-21	NA	99027536	98980540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
Isoform_38735_138	chr13	-	8420	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	-1	combination_of_known_junctions	TRUE	canonical	3	224	junction_23	67.7519382879703	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	-8	True	AATAAA	-14	NA	99027536	98975527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
Isoform_38736_31	chr13	-	3391	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	3026	combination_of_known_junctions	FALSE	canonical	3	32	junction_23	102.017993890807	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCCTGTGACATGCCG	NA	False	NA	-12	True	AATAAA	-22	NA	99027536	98980539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
Isoform_38738_13	chr13	-	3522	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	3156	combination_of_known_junctions	TRUE	canonical	3	32	junction_23	102.017993890807	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATGGTTGTACTTCTT	NA	False	NA	-5	True	ATTAAA	-16	NA	99027537	98980409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
Isoform_3874_5690	chr10	-	2773	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	48	4	48	-4	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	5690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGCTTATTTTC	NA	False	NA	-44	True	AATAAA	-12	NA	86541325	86526707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
Isoform_38741_177	chr13	-	3399	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	42	5012	12	3027	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCCTGTGACATGCCGA	NA	False	NA	-11	True	AATAAA	-23	NA	99062850	98980538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
Isoform_38747_113	chr13	-	8410	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	42	1	12	-1	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	-8	True	AATAAA	-14	NA	99062850	98975527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
Isoform_3875_790	chr10	-	2820	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	1	4	1	-4	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGCTTATTTTC	NA	False	NA	-44	True	AATAAA	-12	NA	86541372	86526707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
Isoform_38760_473	chr13	-	1681	10	FSM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	20	3	20	-3	multi-exon	FALSE	canonical	3	306	junction_5	28.5894740191448	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCGGGTTGTGTTTCTT	NA	False	NA	-14	True	AATAAA	-13	NA	99481193	99456157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
Isoform_38763_5	chr13	-	1729	11	NNC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	142.459678505885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGTTGTGTTTCTTT	NA	False	NA	-13	True	AATAAA	-14	NA	99481189	99456156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_99456902_99457309_99457361_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
Isoform_38764_14	chr13	-	4729	3	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	83221	4134	10625	-4134	3prime_fragment	FALSE	canonical	3	84	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCCTACCCCCGTTCA	NA	False	NA	-5	True	AATAGA	-16	NA	99569827	99562087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_99562470_99563726_99563966_99565719
Isoform_38768_7	chr13	-	7601	5	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	71978	4134	-95	-4134	3prime_fragment	FALSE	canonical	3	46	junction_3	18.280795934532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCCTACCCCCGTTCA	4595	False	NA	-5	True	AATAGA	-16	NA	99581070	99562087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721
Isoform_38770_4	chr13	-	11844	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-55	19	-55	-19	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATGTGTTGAGACATCT	NA	False	NA	-19	True	AATAAA	-21	NA	99653103	99557972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
Isoform_38771_4	chr13	-	11796	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-9	21	-9	-21	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCATGTGTTGAGACAT	NA	False	NA	-21	True	AATAAA	-19	NA	99653057	99557974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
Isoform_38772_9	chr13	-	7680	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-3	4131	-3	-4131	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTACCCCCGTTCATCT	NA	False	NA	-2	True	AATAGA	-19	NA	99653051	99562084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
Isoform_38775_3	chr13	-	1397	2	FSM	ENSMUSG00000052727.7	ENSMUST00000223820.2	1364	2	-29	-4	-7	4	multi-exon	FALSE	canonical	3	33	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	99653055	99643564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_99644718_99652811
Isoform_38778_10	chr13	-	2250	18	NIC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	101.776129926606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTGTTGAGAT	696	False	NA	-5	True	AATAAA	-16	NA	100152120	100085039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100138794_100138948_100151893
Isoform_38779_873	chr13	-	2097	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	27	-1	6	1	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTGTTGAGAT	696	False	NA	-5	True	AATAAA	-16	NA	100152120	100085039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
Isoform_38784_3	chr13	-	9915	39	NIC	ENSMUSG00000049658.14	novel	9921	39	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_35	12.9703742975399	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTGTCCTTTTCAA	6761	False	NA	-1	True	AATAAA	-17	NA	100240576	100154502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100156919_100160107_100160364_100161904_100162164_100163942_100163980_100167292_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230051_100234045_100234106_100234993_100235104_100235460_100235738_100240134
Isoform_38794_32	chr13	-	1978	17	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	0	436	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	76.8251871133419	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAACTGT	NA	False	NA	NA	False	NA	NA	NA	100629087	100596289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
Isoform_38795_11	chr13	-	1463	16	ISM	ENSMUSG00000021639.18	ENSMUST00000145266.8	1630	18	-37	8583	-1	7	5prime_fragment	FALSE	canonical	3	30	junction_15	76.4776219992925	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCACTTTGAAAGAAGA	NA	False	NA	-12	True	AATAAA	-39	NA	100628883	100605308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628750
Isoform_38797_188	chr13	-	1470	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-34	220	-16	8	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCACTTTGAAAGAAGAT	NA	False	NA	-11	True	AATAAA	-40	NA	100629103	100605307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
Isoform_38798_82	chr13	-	1569	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-27	114	-9	114	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTATTTTGAGCCA	NA	False	NA	-10	True	ATTAAA	-16	NA	100629096	100605201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
Isoform_38800_4	chr13	-	3105	15	NIC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	-17	7	intron_retention	FALSE	canonical	3	225	junction_9	30.744835305449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCACTTTGAAAGAAGA	NA	False	NA	-12	True	AATAAA	-39	NA	100629104	100605308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
Isoform_38802_5	chr13	-	2768	9	FSM	ENSMUSG00000021638.13	ENSMUST00000160859.8	2443	9	21	-346	0	-1	multi-exon	FALSE	canonical	0	0	junction_8	25.6706909723911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTGCTCATTTGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	100688968	100634275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688879
Isoform_38803_66	chr13	-	2754	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	39	1259	1	1	multi-exon	FALSE	canonical	3	42	junction_8	12.8640730330638	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGCTCATTTGATGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	100688967	100634273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
Isoform_38805_12	chr13	-	4013	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	38	1	0	-1	multi-exon	FALSE	canonical	3	42	junction_8	12.8640730330638	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACTAGTCCACTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	100688968	100633015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
Isoform_38806_42	chr13	-	2725	9	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGCTCATTTGATGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	100688967	100634273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
Isoform_38807_10	chr13	-	4031	9	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAGTCCACTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100689014	100633014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
Isoform_38809_14	chr13	-	2833	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	1	5	1	-1	multi-exon	FALSE	canonical	3	16	junction_8	20.6272726020674	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTGCTCATTTGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	100689225	100634275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
Isoform_38814_9	chr13	-	3351	7	FSM	ENSMUSG00000021636.16	ENSMUST00000225754.2	3111	7	-240	0	-12	0	multi-exon	FALSE	canonical	1	3	junction_4	3.97562014729219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGCTCCTTA	NA	False	NA	-3	True	ATTAAA	-16	NA	100753450	100732466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753112
Isoform_38815_29	chr13	-	3035	7	FSM	ENSMUSG00000021636.16	ENSMUST00000022137.14	3061	7	24	2	-17	0	multi-exon	FALSE	canonical	1	3	junction_4	4.71404520791032	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGCTCCTTA	NA	False	NA	-3	True	ATTAAA	-16	NA	100753455	100732466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753433
Isoform_38817_48	chr13	-	2839	17	FSM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_16	42.8397723354128	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787559	100753671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787329
Isoform_38818_296	chr13	-	2711	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-4	-315	0	0	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787559	100753671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
Isoform_38820_6	chr13	-	2988	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-282	-314	-278	-1	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTTCTTATCCTT	NA	False	NA	-7	True	ATTAAA	-14	NA	100787837	100753672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
Isoform_38822_11	chr13	-	2902	17	NNC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	50.35979919539	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787540	100753671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787247
Isoform_38826_6	chr13	-	1816	4	ISM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	15	24751	15	-12714	5prime_fragment	FALSE	canonical	3	174	junction_3	25.74662868977	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100787540	100778737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_100780112_100781498_100781754_100786185_100786290_100787457
Isoform_38828_12	chr13	-	1195	11	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	389	660	350	19	3prime_fragment	FALSE	canonical	3	644	junction_3	46.9835077447395	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAGGATAACTGCAGTC	NA	False	NA	-10	True	AATAAA	-22	NA	100867058	100839798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965
Isoform_38829_9	chr13	-	1364	11	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	193	687	154	-8	3prime_fragment	FALSE	canonical	3	644	junction_3	46.9835077447395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867254	100839825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965
Isoform_38831_37	chr13	-	1845	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	29	114	-10	-114	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTATTGCTTTCTGTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	100867418	100839252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
Isoform_38834_481	chr13	-	1253	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	73	662	34	17	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACAAGGATAACTGCAG	NA	False	NA	-12	True	AATAAA	-20	NA	100867374	100839800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
Isoform_38835_147	chr13	-	1295	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	10	683	0	-4	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGTGATTTATGATT	NA	False	NA	-33	True	ATTAAA	-15	NA	100867437	100839821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
Isoform_38846_14	chr13	-	654	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	34	-117	34	-5	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATGTCCCTTTTCTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	100881131	100872467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
Isoform_38849_6	chr13	-	610	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	4	-43	4	43	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTAGCCTATTAACTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	100881161	100872541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
Isoform_38859_92	chr13	-	498	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	31	172	29	2	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGGTGGTCACTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	100881136	100872634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
Isoform_38865_59	chr13	-	692	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	5	4	3	-4	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTCCCTTTTCTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	100881162	100872466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
Isoform_38879_32	chr13	-	912	4	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	-5	at_least_one_novel_splicesite	FALSE	canonical	3	219	junction_3	475.847547948804	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATGTCCCTTTTCTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	100881584	100872467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881238
Isoform_38881_234	chr13	-	1211	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	28	12	28	-12	multi-exon	TRUE	canonical	3	285	junction_6	26.2865816530031	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATACTTGCAGG	NA	False	NA	-11	True	AATAAA	-29	NA	100912379	100896193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
Isoform_38884_14	chr13	-	1298	10	NNC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	33	-13	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	138.91484201961	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAATACTTGCAG	NA	False	NA	-12	True	AATAAA	-28	NA	100912374	100896194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100907981_100908075_100908162_100908212_100909233_100909290_100912194
Isoform_38885_8	chr13	-	1594	8	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	16	-26	intron_retention	FALSE	canonical	3	316	junction_6	18.9413703359625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGCATTATTAACTAAAAAA	NA	False	NA	-25	True	AATAAA	-15	NA	100912391	100896207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100908212_100909233_100909290_100912194
Isoform_38886_18	chr13	-	1046	8	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	28	-13	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	115.35888985851	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAATACTTGCAG	NA	False	NA	-12	True	AATAAA	-28	NA	100912379	100896194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100896703_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
Isoform_38901_2274	chr13	-	2336	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	72	81	-12	1	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	2274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCCTTTTGACTGT	NA	False	NA	-5	True	AATAAA	-29	NA	100923006	100915238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
Isoform_38921_67	chr13	-	4011	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-12	-5	intron_retention	FALSE	canonical	3	2476	junction_5	479.670550205757	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTCTCATTTGCCCTTTT	NA	False	NA	-11	True	AATAAA	-23	NA	100923006	100915244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100920156_100921964_100922127_100922240_100922412_100922889
Isoform_38933_233	chr13	-	3167	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	12	0	12	0	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	NA	False	NA	-4	True	AATAAA	-19	NA	100969923	100939155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
Isoform_38936_84	chr13	-	3205	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-26	0	-26	0	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	NA	False	NA	-4	True	AATAAA	-19	NA	100969961	100939155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
Isoform_38950_11	chr13	-	4020	16	FSM	ENSMUSG00000041417.16	ENSMUST00000055518.13	7113	16	-18	3111	-18	-10	multi-exon	FALSE	canonical	2	8	junction_10	7.37443029814658	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATATGACAAAGTATTGC	NA	False	NA	NA	False	AATAAA	-22	NA	101904743	101820181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
Isoform_38958_23	chr13	-	3938	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	-7	3	-7	-3	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTCTTCAGTTTCTAT	10026	False	NA	0	True	AATAAA	-18	NA	103911123	103878122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
Isoform_38960_96	chr13	-	3860	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	70	4	68	-4	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGTCTTCAGTTTCTA	9987	False	NA	-1	True	AATAAA	-17	NA	103911046	103878123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
Isoform_38961_15	chr13	-	4675	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	72	-813	70	813	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATGGTTTATTTTTTT	9989	False	NA	-2	True	AATAAA	-18	NA	103911044	103877306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
Isoform_38964_18	chr13	-	4651	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	100	-817	98	817	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTATTTTTTTGGTC	10017	False	NA	2	True	AATAAA	-22	NA	103911016	103877302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
Isoform_38979_4	chr13	-	3606	9	ISM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	101	8663	99	2193	5prime_fragment	FALSE	canonical	3	167	junction_7	26.6760074786314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTATCAATTGAGCG	10018	False	NA	NA	False	NA	NA	NA	103911015	103886782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
Isoform_38983_12	chr13	-	7112	26	FSM	ENSMUSG00000021709.15	ENSMUST00000091269.11	6224	26	-890	2	-671	-2	multi-exon	FALSE	canonical	3	35	junction_5	14.0566852422611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCGAGTCTTGGTGTTGC	NA	False	NA	-7	True	NA	NA	NA	104057693	103955300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
Isoform_38984_12	chr13	-	6640	26	FSM	ENSMUSG00000021709.15	ENSMUST00000091269.11	6224	26	-418	2	-199	-2	multi-exon	FALSE	canonical	3	35	junction_5	14.0566852422611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCGAGTCTTGGTGTTGC	NA	False	NA	-7	True	NA	NA	NA	104057221	103955300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
Isoform_38993_12	chr13	-	6315	24	FSM	ENSMUSG00000021709.15	ENSMUST00000188997.7	5084	24	-417	-814	-198	-2	multi-exon	FALSE	canonical	3	24	junction_3	14.3384686218459	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCGAGTCTTGGTGTTGC	NA	False	NA	-7	True	NA	NA	NA	104057220	103955300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
Isoform_38994_4	chr13	-	6769	24	FSM	ENSMUSG00000021709.15	ENSMUST00000188997.7	5084	24	-871	-814	-652	-2	multi-exon	FALSE	canonical	3	24	junction_3	14.3384686218459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCGAGTCTTGGTGTTGC	NA	False	NA	-7	True	NA	NA	NA	104057674	103955300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
Isoform_38998_245	chr13	-	2517	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	13	1632	-6	-104	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTGTAATTTGATTTT	NA	False	NA	-9	True	TATAAA	-43	NA	104246109	104161196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
Isoform_39002_25	chr13	-	2592	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-52	1622	-52	-94	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTTTTTACTGTTA	NA	False	NA	1	True	CATAAA	-43	NA	104246174	104161186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
Isoform_39004_123	chr13	-	4153	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	13	-4	-6	4	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCACAGTACTTTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	104246109	104159560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
Isoform_39005_31	chr13	-	3821	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-10	351	-10	0	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTTTGTTTATGTAGT	NA	False	NA	-6	True	AATAAA	-37	NA	104246132	104159915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
Isoform_39012_10	chr13	-	4261	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-86	-13	-86	13	multi-exon	TRUE	canonical	3	279	junction_1	22.4276614920058	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGTCTTTTAATG	NA	False	NA	0	True	AATAAA	-32	NA	104246208	104159551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
Isoform_3902_8	chr10	-	3366	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	17	0	intron_retention	FALSE	canonical	3	12	junction_11	22.0262803213204	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGGTTTATACTT	NA	False	NA	-11	True	ATTAAA	-13	NA	87982778	87927293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982511_87982713
Isoform_39022_45	chr13	-	3496	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	8	-2	6	2	multi-exon	FALSE	canonical	3	258	junction_6	206.169209766045	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGGATCTGAGTCAACT	NA	False	NA	NA	False	AATAAA	-20	NA	104314925	104278661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_39023_149	chr13	-	1698	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	10	1794	-8	4	multi-exon	FALSE	canonical	3	258	junction_6	206.169209766045	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTTTATTTTCTG	NA	False	NA	-21	True	AAAACA	-37	NA	104314923	104280457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_3903_10	chr10	-	2751	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	23	-609	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	22.0262803213204	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATCCCCATTTTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	87982772	87927902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982511_87982713
Isoform_39031_94	chr13	-	1678	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTTTATTTTCTG	NA	False	NA	-21	True	AAAACA	-37	NA	104314921	104280457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_39033_31	chr13	-	3475	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-6	3	combination_of_known_junctions	TRUE	canonical	3	331	junction_5	173.024051258921	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATCTGAGTCAACTA	NA	False	NA	NA	False	AATAAA	-21	NA	104314921	104278660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_39036_53	chr13	-	3499	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	6	-1163	6	2	multi-exon	FALSE	canonical	3	258	junction_6	196.200152905139	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGGATCTGAGTCAACT	NA	False	NA	NA	False	AATAAA	-20	NA	104314925	104278661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_39039_110	chr13	-	1703	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	6	633	6	4	multi-exon	FALSE	canonical	3	258	junction_6	196.200152905139	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTTTATTTTCTG	NA	False	NA	-21	True	AAAACA	-37	NA	104314925	104280457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_3904_51	chr10	-	3197	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	53	junction_4	10.555093557141	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGGTGGTTTATACT	NA	False	NA	-12	True	ATTAAA	-12	NA	87982763	87927294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
Isoform_39047_71	chr13	-	3480	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	54	4	-8	3	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATCTGAGTCAACTA	NA	False	NA	NA	False	AATAAA	-21	NA	104314923	104278660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_39048_161	chr13	-	1681	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	56	1801	-6	4	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTTTATTTTCTG	NA	False	NA	-21	True	AAAACA	-37	NA	104314921	104280457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_39057_71	chr13	-	1584	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	22	3	22	-3	multi-exon	FALSE	canonical	3	68	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTCTGATTTTGTAT	NA	False	NA	NA	False	ATTAAA	-11	NA	104314925	104310232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104311513_104314621
Isoform_39061_465	chr13	-	2333	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	10	-1	10	1	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATACGTGTCAAATGACT	NA	False	NA	-12	True	TATAAA	-12	NA	104365320	104341630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
Isoform_39064_27	chr13	-	3857	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	15	-1530	15	1530	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCAGTCTCCATTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	104365315	104340101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
Isoform_39065_17	chr13	-	2395	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	-52	-1	-31	1	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATACGTGTCAAATGACT	NA	False	NA	-12	True	TATAAA	-12	NA	104365382	104341630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
Isoform_3907_4	chr10	-	3974	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	14	758	intron_retention	FALSE	canonical	3	53	junction_4	10.555093557141	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAGCTTCCTTTATAA	NA	False	NA	NA	False	ATTAAA	-16	NA	87982781	87926535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
Isoform_39072_627	chr13	-	1872	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	13	186	13	-186	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTTGCAGATTGCATTA	NA	False	NA	-6	True	AATAAA	-28	NA	104953448	104767833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
Isoform_39073_71	chr13	-	2050	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	13	8	13	-8	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGCATATAGGCCTCCC	NA	False	NA	-7	True	AATAAA	-29	NA	104953448	104767655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
Isoform_39078_10	chr13	-	1763	15	NIC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	-5	-191	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	187.819387841031	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACCATTTGCAGATTG	NA	False	NA	-11	True	AATAAA	-23	NA	104953655	104767838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194_104953308_104953618
Isoform_3908_6	chr10	-	3175	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	15	junction_2	20.7605394920267	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTGGGTGGTTTATAC	NA	False	NA	-13	True	ATTAAA	-11	NA	87982739	87927295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
Isoform_39082_5	chr13	-	765	3	FSM	ENSMUSG00000042655.6	ENSMUST00000043061.5	1310	3	0	545	0	-2	multi-exon	FALSE	canonical	3	12	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTGTTTGTTATG	NA	False	NA	NA	False	NA	NA	NA	105000401	104982335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_104982572_104994796_104994955_105000030
Isoform_39083_3	chr13	-	2573	7	ISM	ENSMUSG00000021720.12	ENSMUST00000226044.2	3279	8	23360	569	-3	6	3prime_fragment	FALSE	canonical	0	0	junction_3	1.95078331845327	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTTTTTGACTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	105407550	105267077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_105268072_105304035_105304162_105317957_105318184_105383170_105383207_105386118_105387076_105388759_105388856_105407412
Isoform_3909_3	chr10	-	4019	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-2	776	intron_retention	FALSE	canonical	3	15	junction_2	20.7605394920267	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTGATATGGTCTTT	NA	False	NA	NA	False	ATTAAA	-34	NA	87982805	87926517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
Isoform_3910_5	chr10	-	2598	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	23	-612	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	20.7605394920267	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAAAATCCCCATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	87982772	87927905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
Isoform_39102_1114	chr13	-	4299	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	25	1	12	-1	multi-exon	FALSE	canonical	0	0	junction_13	115.519794104579	1114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073441	106930947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
Isoform_39118_25	chr13	-	2721	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	-273	2856	-265	0	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTGCCAATTTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	107158899	107098359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
Isoform_39119_6	chr13	-	3686	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	29	1589	25	675	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAATAATGTACTTCA	NA	False	NA	0	True	AATAAA	-19	NA	107158597	107097092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
Isoform_39122_3	chr13	-	5275	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	28	1	24	-1	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTATGTTGTGTGTGTCT	NA	False	NA	NA	False	AATAAA	-38	NA	107158598	107095504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
Isoform_39124_8	chr13	-	2604	20	NIC	ENSMUSG00000021693.21	novel	2570	21	NA	NA	-205	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	27.307624781206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTGCCAATTTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	107158839	107098359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
Isoform_39126_5	chr13	-	2684	20	NIC	ENSMUSG00000021693.21	novel	2570	21	NA	NA	-285	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	27.307624781206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTGCCAATTTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	107158919	107098359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
Isoform_3913_17	chr10	-	1544	9	FSM	ENSMUSG00000060002.15	ENSMUST00000139109.8	1447	9	-75	-22	6	0	multi-exon	FALSE	canonical	0	0	junction_1	64.1847918123912	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTCATATTTCTGCAAT	4130	False	NA	-7	True	AATAAA	-18	NA	88339826	88308678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_88308847_88311194_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
Isoform_39131_208	chr13	-	612	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	252.741345054583	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCTTCGTATTTCCTGA	NA	False	NA	-3	True	AATAAA	-13	NA	108295125	108189124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_108189199_108189230_108189489_108217886_108217928_108228067_108228158_108294976
Isoform_39135_3	chr13	-	553	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	39	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	252.741345054583	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGATCCCTTCGTATTTC	NA	False	NA	-7	True	AATAAA	-9	NA	108295086	108189128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_108189199_108189246_108189489_108217886_108217928_108228067_108228158_108294976
Isoform_39136_4	chr13	-	825	6	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	258.96949627321	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCTTCGTATTTCCTGA	NA	False	NA	-3	True	AATAAA	-13	NA	108295157	108189124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_108189199_108189230_108189489_108217886_108217928_108228067_108228158_108269606_108269788_108294976
Isoform_39137_4	chr13	-	605	4	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	294.045725847	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCTTCGTATTTCCTGA	NA	False	NA	-3	True	AATAAA	-13	NA	108295159	108189124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_108189199_108189230_108189489_108228067_108228158_108294976
Isoform_39138_8	chr13	-	724	6	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	284.258755362082	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGATCCCTTCGTATTTC	NA	False	NA	-7	True	AATAAA	-9	NA	108295159	108189128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_108189199_108189246_108189489_108202727_108202826_108217886_108217928_108228067_108228158_108294976
Isoform_3915_31	chr10	-	1453	9	FSM	ENSMUSG00000060002.15	ENSMUST00000117440.8	4863	9	109	3301	6	2	multi-exon	FALSE	canonical	3	79	junction_1	46.4837001001426	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATATTTCTGCAATAT	4130	False	NA	-5	True	AATAAA	-20	NA	88339826	88308676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_88308847_88311287_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
Isoform_39153_508	chr13	-	2973	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	241	480	158	-2	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGTCTTAAAATGT	NA	False	NA	-4	True	AATAAA	-21	NA	111626404	111562693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_39157_237	chr13	-	3452	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	241	1	158	-1	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTGTTCTTTGTAGT	NA	False	NA	-5	True	AATAAA	-14	NA	111626404	111562214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_39171_274	chr13	-	2912	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	158	229	158	-3	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626404	111562694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_39172_106	chr13	-	3391	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	158	-250	158	-2	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTCTTTGTAG	NA	False	NA	-6	True	AATAAA	-13	NA	111626404	111562215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_39173_109	chr13	-	3365	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	185	-251	185	-1	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTGTTCTTTGTAGT	NA	False	NA	-5	True	AATAAA	-14	NA	111626377	111562214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_3918_33	chr10	-	3225	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	6	667	6	-645	multi-exon	FALSE	canonical	3	100	junction_3	42.2794396889098	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGATTCTGTAAGGTT	4130	False	NA	NA	False	AATAAA	-12	NA	88339826	88309345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
Isoform_39188_3	chr13	-	690	2	FSM	ENSMUSG00000085634.3	ENSMUST00000132880.3	663	2	-27	0	-27	0	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTTTTTTTTGTTTTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	111686472	111658883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_111659245_111686143
Isoform_39194_62	chr13	-	6946	21	NNC	ENSMUSG00000021754.18	novel	6978	20	NA	NA	0	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.9077161228674	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAACTGGTATTTTGG	NA	False	NA	NA	False	AATAAA	-13	NA	111945527	111882969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_111884584_111884607_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111945036
Isoform_39200_3	chr13	-	1629	3	ISM	ENSMUSG00000021754.18	ENSMUST00000109267.9	6978	20	2	25380	2	-3824	5prime_fragment	FALSE	canonical	3	52	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTGAGGTTCCTAAG	NA	False	NA	NA	False	NA	NA	NA	111945525	111908341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_111909331_111912401_111912553_111945036
Isoform_39201_4	chr13	-	2833	22	FSM	ENSMUSG00000021758.15	ENSMUST00000099166.10	3012	22	178	1	4	-1	multi-exon	FALSE	canonical	3	36	junction_3	9.06389513461723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTCCAACAGCATTT	NA	False	NA	-2	True	AATAAA	-21	NA	112788831	112734869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
Isoform_39204_13	chr13	-	2905	22	NNC	ENSMUSG00000021758.15	novel	3012	22	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_19	12.5835079052629	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCCAACAGCATTTT	NA	False	NA	-1	True	AATAAA	-22	NA	112788887	112734868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777777_112781042_112781101_112787865_112787953_112788809
Isoform_39221_1237	chr13	-	3317	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	18	354	-8	83	multi-exon	TRUE	canonical	3	524	junction_21	59.6473487509525	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7254	False	NA	-22	True	AATAAA	-21	NA	113063914	113004305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
Isoform_39222_50	chr13	-	3562	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	-227	354	-227	83	multi-exon	FALSE	canonical	3	524	junction_21	59.6473487509525	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7009	False	NA	-22	True	AATAAA	-21	NA	113064159	113004305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
Isoform_3923_27	chr10	-	867	4	FSM	ENSMUSG00000060002.15	ENSMUST00000073783.6	852	4	-39	24	6	-24	multi-exon	FALSE	canonical	3	81	junction_1	64.2201076160903	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATGAAAAATTAAAAA	4130	False	NA	NA	False	NA	NA	NA	88339826	88322927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_88323125_88324243_88324386_88325442_88325591_88339446
Isoform_39232_3	chr13	-	769	2	FSM	ENSMUSG00000021760.6	ENSMUST00000231962.2	769	2	-4	4	-4	2	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGCATTTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	113182931	113179290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_113179834_113182705
Isoform_39235_1277	chr13	-	4433	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	7	7	7	-1	multi-exon	FALSE	canonical	3	496	junction_1	0	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCATCGCTTGTCTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	113755093	113728721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_113731399_113753337
Isoform_39238_64	chr13	-	4478	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	-36	5	-36	1	multi-exon	FALSE	canonical	3	496	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCGCTTGTCTTTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	113755136	113728719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_113731399_113753337
Isoform_3924_196	chr10	-	1279	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-14	-619	-14	1	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTGTAGACTGTCTC	NA	False	NA	-4	True	AATAAA	-23	NA	88520891	88511132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_3926_111	chr10	-	1776	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-14	-1116	-14	-2	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520891	88510635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_39265_829	chr13	-	667	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	178	853	0	0	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
Isoform_39266_20	chr13	-	1514	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	178	6	0	-6	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTAGTGTTGCTGTTATG	NA	False	NA	NA	False	AATAAA	-17	NA	114524616	114424336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
Isoform_39267_53	chr13	-	588	4	FSM	ENSMUSG00000021764.9	ENSMUST00000225035.2	571	4	-17	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	707.770364517256	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114524494
Isoform_39268_24	chr13	-	593	4	FSM	ENSMUSG00000021764.9	ENSMUST00000232101.2	716	4	-30	153	0	0	multi-exon	FALSE	canonical	3	49	junction_1	693.907454604399	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_114425403_114453392_114453566_114487983_114488063_114524494
Isoform_39273_10	chr13	-	2339	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	220	-708	-143	28	multi-exon	FALSE	canonical	3	13	junction_1	3.32264954516723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCTCAGTTTCTGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	114595265	114588797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
Isoform_39274_4	chr13	-	2423	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	108	-680	108	0	multi-exon	FALSE	canonical	3	13	junction_1	3.32264954516723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAAATGT	NA	False	NA	NA	False	TATAAA	-36	NA	114595377	114588825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
Isoform_39276_3	chr13	-	2549	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	-1	-697	-1	17	multi-exon	FALSE	canonical	3	13	junction_1	3.32264954516723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAGCCAGCGGTCTCA	NA	False	NA	NA	False	AATAAA	-8	NA	114595486	114588808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
Isoform_39277_4	chr13	-	1370	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	128	353	128	-7	multi-exon	FALSE	canonical	3	13	junction_1	3.32264954516723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGATAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	114595357	114589858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
Isoform_39278_108	chr13	-	1624	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	85	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTAGTTCGAGTTAC	NA	False	NA	-1	True	AATAAA	-22	NA	115226746	115224890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_115225498_115225729
Isoform_39283_32	chr13	-	2700	4	ISM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	1	1890	1	-1890	intron_retention	FALSE	canonical	3	1748	junction_3	125.151463790436	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGATTTCTTATGTT	NA	False	NA	-14	True	ATTAAA	-16	NA	118523787	118516806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769
Isoform_39285_1865	chr13	-	1428	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	1	1890	1	-1890	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	1865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGATTTCTTATGTT	NA	False	NA	-14	True	ATTAAA	-16	NA	118523787	118516806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
Isoform_39287_229	chr13	-	1478	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	1	1840	1	-1840	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTGACTGAAAGATTT	NA	False	NA	-12	True	ATTAAA	-17	NA	118523787	118516756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
Isoform_39289_79	chr13	-	1616	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	1	1702	1	-1702	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAGTATTGGGCTATCT	NA	False	NA	NA	False	AATATA	-39	NA	118523787	118516618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
Isoform_3929_24	chr10	-	1681	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	88520891	88510634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
Isoform_3930_41	chr10	-	1183	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	1	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTGTAGACTGTCTC	NA	False	NA	-4	True	AATAAA	-23	NA	88520891	88511132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
Isoform_39304_3	chr13	-	1617	7	ISM	ENSMUSG00000025453.19	ENSMUST00000069902.13	3122	15	40440	81	40440	-81	3prime_fragment	FALSE	canonical	3	211	junction_4	10.6614570611463	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCTTCGTCTCTGAT	NA	False	NA	NA	False	AATAAA	-16	NA	119505093	119472064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011
Isoform_39307_18	chr13	-	2273	4	FSM	ENSMUSG00000095930.2	ENSMUST00000178142.2	4103	4	0	1830	0	-1830	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAAAGTCTCTTAGCCTA	NA	False	NA	NA	False	AATAAA	-23	NA	120217418	120173459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_120174332_120175643_120175913_120189115_120190060_120217230
Isoform_39311_37	chr13	-	3357	7	ISM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	22	78	21	-77	intron_retention	FALSE	canonical	3	107	junction_3	24.5453095768259	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120252320	120226800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684
Isoform_39313_12	chr13	-	3435	7	ISM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	22	0	21	0	intron_retention	FALSE	canonical	3	107	junction_3	24.5453095768259	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252320	120226722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684
Isoform_39314_26	chr13	-	3091	8	FSM	ENSMUSG00000094870.9	ENSMUST00000223813.2	2561	8	-6	-524	0	-80	multi-exon	FALSE	canonical	3	47	junction_7	43.7488192260485	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATATTGCTATTTTC	NA	False	NA	-5	True	AATAAA	-16	NA	120252274	120226803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
Isoform_39315_7	chr13	-	3173	8	FSM	ENSMUSG00000094870.9	ENSMUST00000223813.2	2561	8	-6	-606	0	1	multi-exon	FALSE	canonical	3	47	junction_7	43.7488192260485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	NA	False	NA	77	True	AGTAAA	-19	NA	120252274	120226721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
Isoform_39317_5	chr13	-	2370	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	-21	617	-21	-12	multi-exon	FALSE	canonical	3	32	junction_7	48.3110668861025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	120252363	120227339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
Isoform_39318_5	chr13	-	3000	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	-28	-6	-28	6	multi-exon	FALSE	canonical	3	32	junction_7	48.3110668861025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTGTTTTGTTT	NA	False	NA	82	True	AGTAAA	-24	NA	120252370	120226716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
Isoform_39319_8	chr13	-	3154	8	NIC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-228	-81	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	54.2684182972914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAATATTGCTATTTT	NA	False	NA	-6	True	AATAAA	-15	NA	120252653	120226804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252355
Isoform_39320_8	chr13	-	3236	8	NIC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-228	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	54.2684182972914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252653	120226722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252355
Isoform_39322_13	chr13	-	3463	6	ISM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	21	74	21	-73	intron_retention	FALSE	canonical	3	148	junction_5	14.0199857346575	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	2	True	AATAAA	-23	NA	120252320	120226796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684
Isoform_39324_6	chr13	-	3538	6	ISM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	21	-1	21	1	intron_retention	FALSE	canonical	3	148	junction_5	14.0199857346575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	NA	False	NA	77	True	AGTAAA	-19	NA	120252320	120226721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684
Isoform_39325_7	chr13	-	3274	7	NIC	ENSMUSG00000094870.9	novel	3067	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	47	junction_6	45.1568254961405	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252274	120226722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
Isoform_39326_11	chr13	-	3200	7	NIC	ENSMUSG00000094870.9	novel	2561	8	NA	NA	0	-73	intron_retention	FALSE	canonical	3	47	junction_6	45.1568254961405	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	2	True	AATAAA	-23	NA	120252274	120226796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
Isoform_39327_4	chr13	-	3084	7	FSM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	-16	-1	-15	1	multi-exon	FALSE	canonical	3	32	junction_6	50.5426112854842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	NA	False	NA	77	True	AGTAAA	-19	NA	120252357	120226721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
Isoform_39328_16	chr13	-	2982	7	FSM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	7	78	7	-77	multi-exon	FALSE	canonical	3	32	junction_6	50.5426112854842	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120252334	120226800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
Isoform_39329_6	chr13	-	3257	7	FSM	ENSMUSG00000094870.9	ENSMUST00000223722.2	3109	7	-228	80	-228	-80	multi-exon	FALSE	canonical	3	13	junction_6	57.4207182895589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATATTGCTATTTTC	NA	False	NA	-5	True	AATAAA	-16	NA	120252653	120226803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252355
Isoform_3933_13	chr10	-	2692	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	380	junction_3	53.1859943970215	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	88520891	88510634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_39330_4	chr13	-	3237	7	NNC	ENSMUSG00000094870.9	novel	3067	7	NA	NA	-599	-80	intron_retention	FALSE	canonical	2	6	junction_6	59.9666574022598	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATATTGCTATTTTC	NA	False	NA	-5	True	AATAAA	-16	NA	120253024	120226803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252746
Isoform_39333_3	chr13	-	1562	5	NIC	ENSMUSG00000094870.9	novel	2561	8	NA	NA	0	-4	intron_retention	FALSE	canonical	3	47	junction_4	46.8848323021422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTATTTTGCTTTCCA	NA	False	NA	NA	False	ATTAAA	-18	NA	120252274	120237043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
Isoform_39336_61	chr13	-	2706	4	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7307	965	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	1887	False	NA	-3	True	NA	NA	NA	66439272	66427984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
Isoform_39337_3	chr13	-	2267	5	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9925	353	intron_retention	FALSE	canonical	1	1	junction_1	19.3067345763078	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTCTGAGATTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	66846341	66830549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66832305_66834628_66834801_66836256_66836399_66841838_66841917_66846221
Isoform_39338_5	chr13	-	2096	4	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9920	353	intron_retention	FALSE	canonical	3	9	junction_3	19.1543438647449	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTCTGAGATTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	66846336	66830549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66846221
Isoform_3934_26	chr10	-	2194	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	1	intron_retention	FALSE	canonical	3	380	junction_3	53.1859943970215	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTGTAGACTGTCTC	NA	False	NA	-4	True	AATAAA	-23	NA	88520891	88511132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_39340_11	chr13	-	2336	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9942	351	intron_retention	FALSE	canonical	3	25	junction_5	11.6961532137708	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTTGTCTGAGATTCC	NA	False	NA	NA	False	AATAAA	-16	NA	66846358	66830551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66836256_66836399_66841838_66841917_66846221
Isoform_39342_4	chr13	-	1823	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9934	-325	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	15.0598804776134	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	66846350	66831227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66832305_66833395_66833621_66834628_66834801_66836256_66836399_66841838_66841917_66846221
Isoform_39343_10	chr13	-	2477	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9911	352	intron_retention	FALSE	canonical	3	18	junction_2	15.0598804776134	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGTCTGAGATTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	66846327	66830550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66832305_66833395_66833621_66834628_66834801_66836256_66836399_66841838_66841917_66846221
Isoform_39344_9	chr13	-	3167	4	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7249	22731	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	39.8246155034798	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	1345	False	NA	NA	False	AATAAA	-21	NA	67010184	66974983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66977867_67002549_67002611_67002809_67002937_67010088
Isoform_39346_4	chr13	-	558	2	Intergenic	novelGene_3212	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACTTGTGAACTGT	NA	False	NA	-1	True	NA	NA	NA	81792382	81784030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_81784533_81792326
Isoform_39347_45	chr13	-	754	3	Intergenic	novelGene_3213	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	53	junction_2	15	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACTTGTGAACTGT	NA	False	NA	-1	True	NA	NA	NA	81792395	81784030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_81784533_81785816_81786000_81792326
Isoform_39349_11	chr13	-	4789	13	NNC	ENSMUSG00000034575.14	novel	4750	13	NA	NA	-29	13	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	17.3755495516609	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTGGGGTAGTTTCTGC	NA	False	NA	0	True	AATAAA	-28	NA	69682765	69646064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_69648227_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
Isoform_39354_48	chr13	-	3151	4	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	22.1560124771785	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	NA	False	NA	1	True	NA	NA	NA	65705511	65693383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_65696241_65697380_65697442_65697641_65697769_65705405
Isoform_39355_48	chr13	-	179	2	Antisense	novelGene_ENSMUSG00000021666.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1032	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGG	NA	False	NA	NA	False	NA	NA	NA	97296457	97237188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_97237317_97296406
Isoform_39356_16	chr13	-	547	5	Fusion	ENSMUSG00000074832.12_ENSMUSG00000094499.4	novel	515	5	NA	NA	-7	-19629	multi-exon	FALSE	canonical	3	33	junction_1	68.0661443009665	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTCAGTGTCTATTGTT	NA	False	NA	NA	False	NA	NA	NA	66589186	66518841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr13_-_66518952_66519399_66519543_66581478_66581540_66581739_66581867_66589080
Isoform_39357_3	chr13	-	935	5	Genic_Genomic	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7307	12120	multi-exon	FALSE	canonical	3	6	junction_2	23.6788407655442	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAATAGCCCCGATGCCT	1887	False	NA	NA	False	NA	NA	NA	66439272	66416829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_66417335_66417784_66417928_66431569_66431631_66431830_66431958_66439173
Isoform_39360_5	chr13	-	2732	5	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7263	22732	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	35.6677375228651	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTGGAAATAAAGTTTCT	1331	False	NA	NA	False	AATAAA	-22	NA	67010198	66974982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66977274_66977723_66977867_67002549_67002611_67002809_67002937_67010088
Isoform_39361_12	chr13	-	2732	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-2	-341	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	39.8834238750888	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	7279	False	NA	NA	False	NA	NA	NA	65496413	65484376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_65486077_65486496_65487225_65488362_65488424_65488791_65488919_65496297
Isoform_39362_3	chr13	-	3885	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-2	812	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	39.8834238750888	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	7279	False	NA	NA	False	NA	NA	NA	65496413	65483223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_65486086_65486505_65487225_65488362_65488424_65488791_65488919_65496297
Isoform_39363_7	chr13	-	3236	4	Genic_Genomic	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7348	13930	multi-exon	FALSE	canonical	3	6	junction_1	27.3292679903595	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTGGAAATAAAGTTTCT	1846	False	NA	NA	False	AATAAA	-22	NA	66439313	66415019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_66417928_66431569_66431631_66431830_66431958_66439173
Isoform_39364_5	chr13	-	645	5	Fusion	ENSMUSG00000074832.12_ENSMUSG00000094499.4	novel	515	5	NA	NA	-7	204875	multi-exon	FALSE	canonical	0	0	junction_1	77.515724211285	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGGAGTGGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	66589186	66294102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr13_-_66294311_66519399_66519543_66581478_66581540_66581739_66581867_66589080
Isoform_39366_4	chr13	-	2434	6	NNC	ENSMUSG00000021147.18	novel	3780	5	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	30.9283041888817	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCTGTTACAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	8921050	8900514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_8902368_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
Isoform_39367_9	chr13	-	1634	6	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7270	22730	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	38.1386942618648	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGGAAATAAAGTTT	1324	False	NA	NA	False	AATAAA	-20	NA	67010205	66974984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66975488_66976590_66977274_66977723_66977867_67002549_67002611_67002809_67002937_67010088
Isoform_39368_3	chr13	-	1863	15	NNC	ENSMUSG00000021375.12	novel	686	6	NA	NA	-75	-9364	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	21.5960124815217	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGCCAGTTTTTCAAA	NA	False	NA	-17	True	AATAAA	-24	NA	46940189	46913352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_46913548_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988
Isoform_3937_8	chr10	-	2062	6	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	180.578625534696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520891	88510635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_39370_3	chr13	-	7481	7	NNC	ENSMUSG00000063894.16	novel	8805	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.76029781788188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGATTTTTTTGTAA	6593	False	NA	-1	True	NA	NA	NA	21715248	21697391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_21698186_21699467_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
Isoform_39374_9	chr13	-	1846	3	Intergenic	novelGene_3138	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCTCATTTGGAACATG	NA	False	NA	NA	False	NA	NA	NA	64116541	64077847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64079440_64079875_64079955_64116366
Isoform_39375_5	chr13	-	1793	6	Intergenic	novelGene_3048	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	2.78567765543682	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTTGGGTCATGATG	8287	False	NA	-3	True	NA	NA	NA	52727315	52708391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_52709093_52709142_52709757_52709963_52710015_52714215_52714317_52715084_52715256_52727160
Isoform_39376_7	chr13	-	1769	4	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	12	419	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	61.6459424635736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACGTATAAAACTTTGG	NA	False	NA	NA	False	ATTAAA	-24	NA	62564845	62549887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_62551375_62555228_62555290_62555482_62555610_62564751
Isoform_3938_9	chr10	-	1565	6	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	180.578625534696	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTGTAGACTGTCTC	NA	False	NA	-4	True	AATAAA	-23	NA	88520891	88511132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_39380_5	chr13	-	1241	8	NNC	ENSMUSG00000057531.15	novel	1231	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	183.989019193194	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATGCCTCTTTGCTTCT	NA	False	NA	NA	False	AATGAA	-20	NA	45155580	45105258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_45105857_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
Isoform_39381_4	chr13	-	2763	8	NNC	ENSMUSG00000021615.14	novel	424	4	NA	NA	1	-89609	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	51.1380684110803	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATTGTGTTAGTTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	90237654	90086648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_90088488_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
Isoform_39382_3	chr13	-	1906	6	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7261	22736	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	37.494532934816	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATAAAGTTTCTTCCT	1333	False	NA	NA	False	AATAAA	-26	NA	67010196	66974978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66975763_66976590_66977274_66977723_66977867_67002549_67002611_67002809_67002937_67010088
Isoform_39383_3	chr13	-	675	4	Antisense	novelGene_ENSMUSG00000055732.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGTCTTTGTCGCTG	NA	False	NA	NA	False	AATAAA	-13	NA	40868231	40858117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_40858491_40864617_40864722_40867304_40867393_40868121
Isoform_39384_3	chr13	-	607	2	Intergenic	novelGene_3222	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGGCTTTTGAGTGTT	NA	False	NA	NA	False	AGTAAA	-16	NA	86202397	86201033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_86201318_86202074
Isoform_39385_3	chr13	-	1462	2	Antisense	novelGene_ENSMUSG00000049985.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTGCTTTGTATGTGG	NA	False	NA	NA	False	NA	NA	NA	112490758	112488092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_112489000_112490203
Isoform_39387_3	chr13	-	177	2	Intergenic	novelGene_3364	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	120501301	120219811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_120219939_120501251
Isoform_39388_6	chr13	+	682	4	NIC	ENSMUSG00000097709.9	novel	2568	4	NA	NA	-19	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	13.1993265821489	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGCCCTTGTTTTTGC	NA	False	NA	NA	False	NA	NA	NA	3528210	3542400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_3528391_3529908_3530002_3535030_3535221_3542181
Isoform_39389_4	chr13	+	3275	3	ISM	ENSMUSG00000097709.9	ENSMUST00000186610.7	630	4	-64	1184	-3	21	5prime_fragment	FALSE	canonical	3	18	junction_2	7	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAATAACTTTTCAAGCT	NA	False	NA	NA	False	NA	NA	NA	3528239	3538079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_3528391_3529908_3530002_3535048
Isoform_39390_3	chr13	+	639	4	NIC	ENSMUSG00000097709.9	novel	2568	4	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	6.18241233033047	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGCCCTTGTTTTTGC	NA	False	NA	NA	False	NA	NA	NA	3528235	3542400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_3528391_3529908_3530002_3535048_3535221_3542181
Isoform_39397_2637	chr13	+	2181	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	67	2055	0	-4	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	2637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTCTTGGTATTGAGT	NA	False	NA	31	True	AATAAA	-14	NA	3588129	3615816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
Isoform_3940_6	chr10	-	1468	5	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	210.086291794586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520891	88511133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88520827
Isoform_39402_198	chr13	+	2571	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	67	1665	0	386	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTTTTGTAGTGCAGC	NA	False	NA	6	True	AATAAA	-15	NA	3588129	3616206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
Isoform_3941_9	chr10	-	1170	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	1	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	186.499329757509	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTGTAGACTGTCTC	NA	False	NA	-4	True	AATAAA	-23	NA	88520891	88511132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_88511933_88514385_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_3942_8	chr10	-	1667	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	186.499329757509	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520891	88510635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_88511933_88514385_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_39442_78	chr13	+	2346	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	58	2049	1	1287	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTCCCTGTGTCTTAT	NA	False	NA	5	True	AATAAA	-14	NA	3684089	3701773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
Isoform_39443_15	chr13	+	1205	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	12	3236	12	100	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTCTCTGTGTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	3684043	3700586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
Isoform_39444_3	chr13	+	2320	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	14	2119	14	1217	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCTATATCTTTTGGT	NA	False	NA	-65	True	AATAAA	-15	NA	3684045	3701703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
Isoform_39445_3	chr13	+	1364	10	NIC	ENSMUSG00000021213.13	novel	1262	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.02254900194121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATATTTTCTTTGTTT	7396	False	NA	NA	False	AATAAA	-17	NA	4241187	4255595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_4241310_4242293_4242435_4244032_4244201_4244675_4244793_4246431_4246510_4246987_4247111_4247799_4247910_4248476_4248643_4253365_4253449_4255339
Isoform_39446_5	chr13	+	1220	9	FSM	ENSMUSG00000021213.13	ENSMUST00000021634.4	1262	9	42	0	8	0	multi-exon	FALSE	canonical	1	2	junction_3	2.98956518577535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATATTTTCTTTGTTT	7399	False	NA	NA	False	AATAAA	-17	NA	4241190	4255595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_4241310_4244032_4244201_4244675_4244793_4246431_4246510_4246987_4247111_4247799_4247910_4248476_4248643_4253365_4253449_4255339
Isoform_39455_172	chr13	+	4167	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	58	0	-1	0	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGATTGTTTTT	NA	False	NA	8	True	CATAAA	-18	NA	5911538	5920393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
Isoform_39456_118	chr13	+	4210	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	14	1	14	-1	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGCCTGATTGTTTT	NA	False	NA	7	True	CATAAA	-17	NA	5911494	5920392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
Isoform_3946_6	chr10	-	2590	4	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-414	intron_retention	FALSE	canonical	3	380	junction_2	60.5383257853146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88520891	88512165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_39465_991	chr13	+	3420	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	13	473	5	0	multi-exon	FALSE	canonical	3	407	junction_1	134.848435629472	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598199	6630078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
Isoform_39467_46	chr13	+	3443	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	-10	473	-8	0	multi-exon	TRUE	canonical	3	407	junction_1	134.848435629472	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598176	6630078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
Isoform_39468_33	chr13	+	3556	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	13	337	5	136	multi-exon	FALSE	canonical	3	407	junction_1	134.848435629472	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCTGCTCTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	6598199	6630214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
Isoform_39478_1350	chr13	+	3417	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	112.248614598533	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598199	6630078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
Isoform_39479_63	chr13	+	3544	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	126	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	112.248614598533	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAAAAAGCACTTGCTG	NA	False	NA	NA	False	NA	NA	NA	6598198	6630204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
Isoform_39502_16	chr13	+	2611	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	424	-8	-18	8	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATACTTGTAGTTTTAT	NA	False	NA	83	True	TATAAA	-14	NA	8935960	8942495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
Isoform_39503_694	chr13	+	2526	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	425	76	-17	-76	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTAATATCTGG	NA	False	NA	-1	True	AATAAA	-15	NA	8935961	8942411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
Isoform_39504_43	chr13	+	2833	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	118	76	118	-76	multi-exon	TRUE	canonical	3	487	junction_1	56.3576747213722	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTAATATCTGG	NA	False	NA	-1	True	AATAAA	-15	NA	8935654	8942411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
Isoform_39518_239	chr13	+	6002	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	25	-417	-1	-46	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTTTTGATTCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	9143941	9224441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
Isoform_39524_8	chr13	+	6131	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	-60	-461	-60	-2	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTTAAAGATTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	9143856	9224485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
Isoform_39528_21	chr13	+	5795	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	-76	1	-1	-1	multi-exon	FALSE	canonical	0	0	junction_12	76.8002431229876	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTAAAGATTTTTTT	NA	False	NA	10	True	ATTAAA	-18	NA	9143941	9224486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
Isoform_39539_3	chr13	+	8196	38	NIC	ENSMUSG00000048264.17	novel	8023	37	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	12.904719098774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAGCAGTTTCTTAA	NA	False	NA	20	True	AATAAA	-21	NA	9326564	9718958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_9327103_9543140_9543213_9544869_9545038_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664505_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
Isoform_39541_12	chr13	+	8032	37	FSM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	-13	4	-13	-4	multi-exon	TRUE	canonical	3	37	junction_2	7.00545422430901	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCAGTTTCTTAATT	NA	False	NA	22	True	AATAAA	-23	NA	9326550	9718960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_9327103_9543140_9543213_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
Isoform_39549_468	chr13	+	6772	45	FSM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	10	-2	10	2	multi-exon	FALSE	canonical	3	181	junction_14	60.7064258923889	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTATTTGTCTTTATC	1724	False	NA	7	True	AGTAAA	-21	NA	12410261	12453776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
Isoform_39550_42	chr13	+	6807	45	FSM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	-26	-1	-26	1	multi-exon	TRUE	canonical	3	181	junction_14	60.7064258923889	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	1688	False	NA	6	True	AGTAAA	-20	NA	12410225	12453775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
Isoform_39582_99	chr13	+	4246	16	FSM	ENSMUSG00000057069.8	ENSMUST00000071973.8	4239	16	-8	1	1	-1	multi-exon	TRUE	canonical	2	4	junction_15	21.5185707910374	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGTTTCTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	12580755	12624416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12608388_12608401_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
Isoform_39585_24	chr13	+	4234	15	NIC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	25.3382223173624	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGTTTCTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	12580755	12624416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
Isoform_39587_9	chr13	+	2965	2	ISM	ENSMUSG00000110123.2	ENSMUST00000209949.2	915	10	24516	-2636	24516	2636	3prime_fragment	FALSE	canonical	3	59	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGTTTCTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	13522464	13527648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_13522733_13524951
Isoform_39590_1107	chr13	+	6040	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	56	-5	56	5	multi-exon	FALSE	canonical	0	0	junction_7	184.261632008595	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTGCTGTTTTGT	NA	False	NA	17	True	ATTAAA	-32	NA	13612191	13686859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
Isoform_39592_315	chr13	+	6064	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	31	-4	31	4	multi-exon	TRUE	canonical	0	0	junction_7	184.261632008595	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTTTTGCTGTTTTG	NA	False	NA	16	True	ATTAAA	-31	NA	13612166	13686858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
Isoform_39649_4	chr13	+	3699	14	ISM	ENSMUSG00000019726.13	ENSMUST00000110559.3	13181	53	135416	17	16462	-17	3prime_fragment	FALSE	canonical	1	3	junction_2	5.19786027893112	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAAATAGACTTAAACCT	NA	False	NA	NA	False	AATAAA	-5	NA	13900397	13953371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_13900644_13903149_13903217_13904909_13905067_13915049_13915191_13917824_13918043_13921156_13921388_13926527_13926718_13931895_13932033_13933962_13934062_13935290_13935431_13935688_13935787_13950054_13950212_13950598_13950671_13951625
Isoform_39650_23	chr13	+	3812	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	78	2	-74	-2	multi-exon	FALSE	canonical	3	178	junction_5	19.409889274617	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCTTTTCCTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	14129131	14173657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
Isoform_39651_316	chr13	+	3724	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	166	2	10	-2	multi-exon	FALSE	canonical	3	178	junction_5	19.409889274617	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCTTTTCCTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	14129219	14173657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
Isoform_39652_16	chr13	+	3837	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	53	2	53	-2	multi-exon	TRUE	canonical	3	178	junction_5	19.409889274617	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCTTTTCCTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	14129106	14173657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
Isoform_39658_38	chr13	+	2371	13	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	55.6334107249312	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCTTTTCCTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	14129218	14173657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172963
Isoform_39660_30	chr13	+	3697	12	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	22	junction_7	55.6602741252905	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCTTTTCCTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	14129205	14173657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
Isoform_39673_19	chr13	+	5761	24	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	13.4276750581372	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGTTTGTAGAAGGTA	1436	False	NA	9	True	AATAAA	-23	NA	14238376	14373952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
Isoform_39677_10	chr13	+	5589	23	FSM	ENSMUSG00000039219.19	ENSMUST00000039538.15	5844	23	12	243	5	-2	multi-exon	FALSE	canonical	3	6	junction_16	16.774390161471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGATTTTGTTTGTA	1448	False	NA	2	True	AATAAA	-16	NA	14238388	14373945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
Isoform_39678_3	chr13	+	3922	8	ISM	ENSMUSG00000039219.19	ENSMUST00000110534.8	5864	24	106198	1	5800	-1	3prime_fragment	FALSE	canonical	3	31	junction_1	17.6588995889857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGATTTTGTTTGTAG	NA	False	NA	3	True	AATAAA	-17	NA	14344574	14373946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
Isoform_3968_146	chr10	-	8829	62	FSM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	-8	0	-8	0	multi-exon	TRUE	canonical	3	123	junction_48	34.745281900583	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	-1	True	ATTAAA	-16	NA	88662674	88582468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
Isoform_39680_42	chr13	+	2862	9	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1543.35047461683	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGAATGCTGAGTGGTG	NA	False	NA	2	True	ATTAAA	-13	NA	14787844	14802216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933_14801616_14801639
Isoform_39681_2269	chr13	+	837	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	20	2054	20	-2054	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATTTTAGTTTTTAA	NA	False	NA	7	True	AATAAA	-7	NA	14787844	14800167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
Isoform_39682_295	chr13	+	934	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	19	1958	19	-1958	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATATTTTCTTTAG	NA	False	NA	10	True	ATTAAA	-18	NA	14787843	14800263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
Isoform_39692_10	chr13	+	2027	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	2	6	2	-6	multi-exon	FALSE	canonical	3	36	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGAGGCCTGTTTTT	NA	False	NA	4	True	ATTAAA	-11	NA	14804740	14812782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14804870_14810884
Isoform_39695_46	chr13	+	1923	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	106	6	12	-6	multi-exon	FALSE	canonical	3	36	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGAGGCCTGTTTTT	NA	False	NA	4	True	ATTAAA	-11	NA	14804844	14812782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14804870_14810884
Isoform_39696_144	chr13	+	1984	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	31	899	2	-6	multi-exon	FALSE	canonical	3	129	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGAGGCCTGTTTTT	NA	False	NA	4	True	ATTAAA	-11	NA	14804863	14812782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14804950_14810884
Isoform_39699_3	chr13	+	2074	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	20	820	-9	73	multi-exon	FALSE	canonical	3	129	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGCTTGTTATTAA	NA	False	NA	83	True	ACTAAA	-31	NA	14804852	14812861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_14804950_14810884
Isoform_3970_3	chr10	-	2974	22	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-10	-21911	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.0602519284444	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATACAAATAATGCTAATA	NA	False	NA	NA	False	ACTAAA	-36	NA	88662676	88633966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88647293_88647376_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
Isoform_39700_7	chr13	+	8252	15	NIC	ENSMUSG00000021318.16	novel	2004	12	NA	NA	-43	-3	combination_of_known_junctions	FALSE	canonical	2	12	junction_10	4.81970868795353	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCTACTGGATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	15637776	15904608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_15637994_15652584_15652750_15722984_15723228_15788363_15788470_15815653_15815860_15818878_15819026_15823105_15823308_15834546_15834761_15835465_15835580_15836974_15837116_15888083_15888234_15889534_15889700_15894639_15894931_15898024_15898353_15899045
Isoform_39702_94	chr13	+	2658	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	10	4	-10	-4	multi-exon	FALSE	canonical	3	374	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATTACTAAACAGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	17870007	17873686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_17870406_17871426
Isoform_39703_210	chr13	+	894	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	7	1771	7	78	multi-exon	FALSE	canonical	3	374	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGATTTTTGTGAATA	NA	False	NA	17	True	AATAAA	-18	NA	17870004	17871919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_17870406_17871426
Isoform_39704_6	chr13	+	2918	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	-250	4	-29	-4	multi-exon	FALSE	canonical	3	374	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATTACTAAACAGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	17869747	17873686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_17870406_17871426
Isoform_39706_13	chr13	+	1139	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	-237	1770	-16	79	multi-exon	FALSE	canonical	3	374	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGATTTTTGTGAATAT	NA	False	NA	18	True	AATAAA	-19	NA	17869760	17871920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_17870406_17871426
Isoform_39716_1271	chr13	+	3160	30	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	3	298	junction_29	71.5253046363968	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	18901469	19050974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289_19050795_19050816
Isoform_39717_35	chr13	+	3027	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	10	162	10	-162	multi-exon	TRUE	canonical	3	419	junction_25	60.5186237990473	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTGAGAACTGACACT	NA	False	NA	NA	False	ATTAAA	-11	NA	18901469	19050819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
Isoform_39719_16	chr13	+	4649	29	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-7	intron_retention	FALSE	non_canonical	3	298	junction_28	72.7622982101055	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	18901469	19050974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289_19050795_19050816
Isoform_3972_8	chr10	-	3260	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	31	3457	18	179	multi-exon	FALSE	canonical	3	18	junction_8	13.3450365304858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGGTTTTAATGATCT	NA	False	NA	NA	False	ATTAAA	-20	NA	89279798	89248141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
Isoform_39724_33	chr13	+	3176	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	16	7	16	-7	multi-exon	FALSE	canonical	3	419	junction_25	60.5186237990473	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	18901475	19050974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
Isoform_3973_4	chr10	-	6751	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	-11	8	-11	-8	multi-exon	FALSE	canonical	3	18	junction_8	13.3450365304858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTTATGTTTGCCTAA	NA	False	NA	41	True	AATAAA	-10	NA	89279840	89244692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
Isoform_39734_38	chr13	+	1741	12	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	124869	7	-2704	-7	3prime_fragment	FALSE	canonical	3	419	junction_8	63.056055345244	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	19026328	19050974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
Isoform_3974_10	chr10	-	3273	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	15	3017	2	179	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGGTTTTAATGATCT	NA	False	NA	NA	False	ATTAAA	-20	NA	89279814	89248141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
Isoform_39742_101	chr13	+	3214	21	FSM	ENSMUSG00000021314.14	ENSMUST00000003345.10	3367	21	149	4	3	-4	multi-exon	FALSE	canonical	3	40	junction_16	8.61669890387264	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGGTTCTTTTTCAAG	NA	False	NA	15	True	AATAAA	-20	NA	19132523	19335087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
Isoform_39743_13	chr13	+	3090	20	NIC	ENSMUSG00000021314.14	novel	3367	21	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_16	14.1794982896135	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTCTTTTTCAAGAG	NA	False	NA	17	True	AATAAA	-22	NA	19132526	19335089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19321705_19321913_19323341_19323603_19326134_19326237_19333905
Isoform_39744_51	chr13	+	3223	21	FSM	ENSMUSG00000021314.14	ENSMUST00000200466.5	3224	21	6	-5	6	-4	multi-exon	FALSE	canonical	3	27	junction_16	10.4957134107215	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGGTTCTTTTTCAAG	NA	False	NA	15	True	AATAAA	-20	NA	19132526	19335087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
Isoform_39746_7	chr13	+	3107	20	NIC	ENSMUSG00000021314.14	novel	3224	21	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	15.1494859717337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTCTTTTTCAAGA	NA	False	NA	16	True	AATAAA	-21	NA	19132520	19335088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19321705_19321913_19323341_19323603_19326134_19326237_19333905
Isoform_39748_3	chr13	+	3880	5	FSM	ENSMUSG00000021319.8	ENSMUST00000222464.2	4049	5	-8	177	-8	-8	multi-exon	FALSE	canonical	3	8	junction_1	1.80277563773199	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAAGATCTTCATGTG	NA	False	NA	NA	False	ATTAAA	-43	NA	19807265	19816987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235
Isoform_39750_4	chr13	+	587	4	ISM	ENSMUSG00000041112.18	ENSMUST00000181429.8	3113	7	-150	54800	-150	-4	5prime_fragment	FALSE	canonical	3	27	junction_1	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAGGCCATAACCCAG	NA	False	NA	NA	False	NA	NA	NA	20274615	20393377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_20274942_20369523_20369675_20392303_20392345_20393308
Isoform_39751_5	chr13	+	3775	22	FSM	ENSMUSG00000041112.18	ENSMUST00000072519.7	5464	22	-138	1827	-115	-1827	multi-exon	FALSE	canonical	2	20	junction_15	9.13863990039136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGAGCTGGTGTTTTGA	NA	False	NA	6	True	AATAAA	-16	NA	20274650	20790696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_20274942_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
Isoform_39752_37	chr13	+	3665	22	FSM	ENSMUSG00000041112.18	ENSMUST00000072519.7	5464	22	-26	1825	-3	-1825	multi-exon	FALSE	canonical	2	20	junction_15	9.13863990039136	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGGTGTTTTGATT	NA	False	NA	8	True	AATAAA	-18	NA	20274762	20790698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_20274942_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
Isoform_39753_18	chr13	+	2180	7	NIC	ENSMUSG00000041112.18	novel	3748	5	NA	NA	357	-1826	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	14.4308696896618	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGCTGGTGTTTTGAT	NA	False	NA	7	True	AATAAA	-17	NA	20657252	20790697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_20657458_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
Isoform_39761_3969	chr13	+	2084	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	261	1859	-32	1	multi-exon	FALSE	canonical	3	719	junction_6	36.2209771220141	3969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTTGTTTTTGTTATG	1190	False	NA	22	True	AATAAA	-24	NA	21364361	21377034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
Isoform_39765_288	chr13	+	2350	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	-5	1859	-5	1	multi-exon	TRUE	canonical	3	719	junction_6	36.2209771220141	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTTGTTTTTGTTATG	924	False	NA	22	True	AATAAA	-24	NA	21364095	21377034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
Isoform_39771_68	chr13	+	2055	8	FSM	ENSMUSG00000021326.14	ENSMUST00000223065.2	2046	8	-11	2	-11	-2	multi-exon	FALSE	canonical	3	28	junction_5	261.483054432026	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACGTTTTGTTTTTGTT	1211	False	NA	19	True	AATAAA	-21	NA	21364382	21377031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374266_21374295_21375389_21375417_21376199
Isoform_3978_23	chr10	-	3443	18	FSM	ENSMUSG00000069539.12	ENSMUST00000092227.12	3566	18	-29	152	-12	-152	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCACCTGGTACCTGC	NA	False	NA	NA	False	ATTAAA	-23	NA	89522159	89475965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
Isoform_39780_7	chr13	+	1260	5	FSM	ENSMUSG00000004341.9	ENSMUST00000004453.9	1340	5	81	-1	81	1	multi-exon	FALSE	canonical	3	9	junction_2	5.71729831301464	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTCTGAGTGATGTT	1006	False	NA	NA	False	NA	NA	NA	21496375	21503795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21496515_21497817_21497972_21501154_21501273_21501738_21501839_21503046
Isoform_39781_7	chr13	+	3726	3	ISM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	12	2462	0	3	intron_retention	FALSE	canonical	3	44	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATACTGTCCTTTGT	NA	False	NA	11	True	CATAAA	-16	NA	21547001	21553997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_21547043_21547749_21548222_21550784
Isoform_39782_71	chr13	+	1914	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	29	2462	17	3	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATACTGTCCTTTGT	NA	False	NA	11	True	CATAAA	-16	NA	21547018	21553997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
Isoform_39783_7	chr13	+	4406	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	-8	7	-8	-7	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTAGTTTCTCATAA	NA	False	NA	1	True	NA	NA	NA	21546981	21556452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
Isoform_39784_26	chr13	+	2221	4	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	22.9927524813074	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATACTGTCCTTTGTGTG	NA	False	NA	14	True	CATAAA	-19	NA	21547017	21554000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_21547346_21547749_21548222_21550784_21550927_21552721
Isoform_39785_4	chr13	+	4664	4	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	25	-7	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	22.9927524813074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTAGTTTCTCATAA	NA	False	NA	1	True	NA	NA	NA	21547026	21556452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_21547346_21547749_21548222_21550784_21550927_21552721
Isoform_39786_7	chr13	+	2385	4	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	44	3	intron_retention	FALSE	canonical	0	0	junction_1	32.3144274623924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATACTGTCCTTTGT	NA	False	NA	11	True	CATAAA	-16	NA	21547045	21553997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_21547541_21547749_21548222_21550784_21550927_21552721
Isoform_39788_3	chr13	+	2449	3	FSM	ENSMUSG00000054931.8	ENSMUST00000062609.6	2400	3	-56	7	-56	-7	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAATTTTTAGTTAGAG	NA	False	NA	NA	False	AATAAA	-21	NA	21663020	21669670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21663680_21665443_21665601_21668037
Isoform_39789_57	chr13	+	2715	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	-13	1	-13	-1	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTTAAGTTTCTTCT	NA	False	NA	11	True	ATTAAA	-15	NA	22129250	22144654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
Isoform_3979_15	chr10	-	3953	18	FSM	ENSMUSG00000069539.12	ENSMUST00000092227.12	3566	18	2	-389	2	106	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTTCAAGTATAGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	89522128	89475424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
Isoform_39790_6	chr13	+	2796	6	NIC	ENSMUSG00000006720.17	novel	3198	6	NA	NA	114	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	28.5769137591868	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	12	True	ATTAAA	-16	NA	22129420	22144655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134372_22134500_22142593
Isoform_39791_84	chr13	+	2747	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	156	295	131	-1	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTTAAGTTTCTTCT	NA	False	NA	11	True	ATTAAA	-15	NA	22129437	22144654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
Isoform_39793_3	chr13	+	2870	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	159	169	134	7	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTCATGGCTCTAC	NA	False	NA	NA	False	CATAAA	-20	NA	22129440	22144780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
Isoform_39794_3	chr13	+	2888	5	FSM	ENSMUSG00000006720.17	ENSMUST00000006903.8	2214	5	-529	-145	127	-1	multi-exon	FALSE	canonical	3	62	junction_4	8.4372685153431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTTAAGTTTCTTCT	NA	False	NA	11	True	ATTAAA	-15	NA	22129433	22144654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
Isoform_39795_37	chr13	+	721	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	3	432	3	-432	multi-exon	FALSE	canonical	3	53	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAAAAAAATGCGTCAT	186	False	NA	NA	False	NA	NA	NA	23868184	23876459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23868605_23876158
Isoform_39797_88	chr13	+	4174	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-515	2190	-515	1347	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATAGCAGTGATAAGG	NA	False	NA	135	True	AATAAA	-37	NA	24985124	24997990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
Isoform_3981_10	chr10	-	3983	18	FSM	ENSMUSG00000069539.12	ENSMUST00000174252.8	4817	18	-8	842	-8	106	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTTCAAGTATAGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	89522155	89475424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_89476979_89477852_89477973_89481323_89481420_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
Isoform_3982_4	chr10	-	4465	18	FSM	ENSMUSG00000069539.12	ENSMUST00000174252.8	4817	18	1	351	1	-351	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGGCTGAATGTTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	89522146	89474933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_89476979_89477852_89477973_89481323_89481420_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
Isoform_39826_1283	chr13	+	1949	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	2	6	0	-5	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACTACGACTTTTTTC	NA	False	NA	15	True	AATAAA	-15	NA	25015663	25026130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
Isoform_39829_21	chr13	+	2004	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	-53	6	-53	-5	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACTACGACTTTTTTC	NA	False	NA	15	True	AATAAA	-15	NA	25015608	25026130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
Isoform_39835_19	chr13	+	1869	6	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	322.122585361536	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACGACTTTTTTCTTCA	NA	False	NA	19	True	AATAAA	-19	NA	25015661	25026134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_25015913_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
Isoform_3984_284	chr10	-	1698	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	6	1	6	-1	multi-exon	FALSE	canonical	3	269	junction_5	22.702422778197	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCTGTTTAATGTTT	NA	False	NA	-19	True	AATAAA	-20	NA	89568151	89547833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
Isoform_39846_5	chr13	+	2167	10	FSM	ENSMUSG00000035910.16	ENSMUST00000069614.7	6634	10	-270	4737	-21	434	multi-exon	FALSE	canonical	3	14	junction_2	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGTTTCAGAGATAAT	NA	False	NA	NA	False	AATAAA	-21	NA	25239965	25389952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
Isoform_3985_8	chr10	-	1580	10	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	88.0716599363871	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCTGTTTAATGTTT	NA	False	NA	-19	True	AATAAA	-20	NA	89568151	89547833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89568035
Isoform_39850_23	chr13	+	2826	13	FSM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	53	26	53	-26	multi-exon	FALSE	canonical	1	2	junction_9	4.03026742978125	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAATGATTCCTCATAA	NA	False	NA	NA	False	AATAAA	-17	NA	30320524	30430674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_30320746_30378518_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146_30425299_30429331
Isoform_39851_6	chr13	+	2750	13	FSM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	24	131	24	-131	multi-exon	FALSE	canonical	1	2	junction_9	4.03026742978125	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGATGTGCCTCAATCA	NA	False	NA	NA	False	NA	NA	NA	30320495	30430569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_30320746_30378518_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146_30425299_30429331
Isoform_39852_20	chr13	+	3169	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	-164	10	-62	-10	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCTGACATCATGTGC	NA	False	NA	-1	True	AATAAA	-12	NA	30843919	30895204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
Isoform_39853_24	chr13	+	3017	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	-9	7	-9	-7	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGACATCATGTGCAGT	NA	False	NA	2	True	AATAAA	-15	NA	30844074	30895207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
Isoform_39856_6	chr13	+	1071	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	87	3	14	-3	multi-exon	FALSE	canonical	3	16	junction_7	7.4258236676383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCATGTGCAGTGTGT	NA	False	NA	6	True	AATAAA	-19	NA	30844068	30895211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
Isoform_39857_6	chr13	+	1223	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	-62	0	-62	0	multi-exon	FALSE	canonical	3	16	junction_7	7.4258236676383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	False	NA	9	True	AATAAA	-22	NA	30843919	30895214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
Isoform_39859_669	chr13	+	2624	7	FSM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	4	5	4	-3	multi-exon	FALSE	canonical	3	161	junction_2	20.5081284697881	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTCTTCAGTTCTTCA	NA	False	NA	9	True	AATAAA	-10	NA	32986024	33006587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33000466_33004201_33004358_33005021_33005102_33005866
Isoform_3986_4	chr10	-	1756	11	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_7	88.8560633834293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCTGTTTAATGTTT	NA	False	NA	-19	True	AATAAA	-20	NA	89568159	89547833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561816_89562498_89562623_89564015_89564085_89564761_89564880_89568035
Isoform_39869_3	chr13	+	1895	7	FSM	ENSMUSG00000042842.12	ENSMUST00000110293.9	2193	7	293	5	-1	0	multi-exon	TRUE	canonical	0	0	junction_3	2.08166599946613	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATGTCTTCTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	33149484	33163045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_33149527_33152482_33152658_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
Isoform_3987_4	chr10	-	1641	10	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_7	117.446389135587	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATATCTGTTTAATGT	NA	False	NA	-21	True	AATAAA	-18	NA	89568164	89547835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561816_89562498_89562623_89564015_89564085_89568035
Isoform_39870_48	chr13	+	1830	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	124	1299	-11	-1299	multi-exon	FALSE	canonical	3	32	junction_4	6.66874967458085	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGCCATGGTCTTATT	NA	False	NA	9	True	AATAAA	-22	NA	33211522	33224568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
Isoform_39871_21	chr13	+	1864	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	93	1296	-42	-1296	multi-exon	FALSE	canonical	3	32	junction_4	6.66874967458085	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATGGTCTTATTTTC	NA	False	NA	12	True	AATAAA	-25	NA	33211491	33224571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
Isoform_39873_16	chr13	+	1101	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	-37	-1	27	1	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGCACTGTATTAGT	NA	False	NA	14	True	AATACA	-26	NA	34148696	34169630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
Isoform_39875_15	chr13	+	3933	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	-50	-2820	14	23	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATATCCCCTTCCTGGT	NA	False	NA	37	True	ATTAAA	-41	NA	34148683	34172449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
Isoform_39878_37	chr13	+	3231	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	-16	627	-16	-627	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTCTCTTAGATATT	NA	False	NA	9	True	NA	NA	NA	34148653	34171799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
Isoform_39879_62	chr13	+	3785	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	54	3	-10	-3	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTCCTCTCATTTAT	NA	False	NA	11	True	ATTAAA	-15	NA	34148723	34172423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
Isoform_39880_79	chr13	+	1033	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	13	2796	13	1	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGCACTGTATTAGT	NA	False	NA	14	True	AATACA	-26	NA	34148682	34169630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
Isoform_39883_72	chr13	+	4687	12	Fusion	ENSMUSG00000021408.16_ENSMUSG00000091462.3	novel	3266	11	NA	NA	9	132	multi-exon	FALSE	canonical	3	30	junction_11	5.53277238352834	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCATGTTGGCATCT	NA	False	NA	NA	False	AATAAA	-14	NA	34186391	34219151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478_34217402_34217425
Isoform_39888_160	chr13	+	1195	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	52	6	-8	-3	multi-exon	FALSE	canonical	3	157	junction_3	28.0356915377524	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTAGTGTTCCTGT	NA	False	NA	9	True	AATAAA	-11	NA	34221631	34258051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
Isoform_39889_3	chr13	+	1076	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	69.9828550432176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTGTTCCTGTTTGCT	NA	False	NA	14	True	AATAAA	-16	NA	34221631	34258056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34257658
Isoform_39890_14	chr13	+	1028	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	72.3972375163583	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTAGTGTTCCTGT	NA	False	NA	9	True	AATAAA	-11	NA	34221631	34258051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_34221753_34228406_34228511_34234263_34234418_34244416_34244549_34247892_34248017_34257658
Isoform_39891_3	chr13	+	1321	7	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	73.9316501160963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTAGTGTTCCTGT	NA	False	NA	9	True	AATAAA	-11	NA	34221614	34258051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_34221862_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
Isoform_39892_5	chr13	+	1150	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	96.2808392152873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACATTTGTAGTGTTCC	NA	False	NA	6	True	AATAAA	-8	NA	34221615	34258048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_34221862_34228406_34228511_34234263_34234418_34244416_34244549_34247892_34248017_34257658
Isoform_39893_415	chr13	+	500	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	51	4	51	1	multi-exon	FALSE	canonical	3	1035	junction_1	31.5	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTCATTTTACTTTG	NA	False	NA	18	True	AATAAA	-18	NA	34346997	34362152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34347233_34350043_34350120_34361963
Isoform_39894_132	chr13	+	538	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	16	1	16	-1	multi-exon	FALSE	canonical	3	1035	junction_1	31.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATTTTACTTTGTTT	NA	False	NA	21	True	AATAAA	-21	NA	34346962	34362155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34347233_34350043_34350120_34361963
Isoform_39896_45	chr13	+	427	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	51	-4	51	-1	multi-exon	FALSE	canonical	3	173	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATTTTACTTTGTTT	NA	False	NA	21	True	AATAAA	-21	NA	34346997	34362155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34347233_34361963
Isoform_39897_23	chr13	+	459	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	16	-1	16	1	multi-exon	FALSE	canonical	3	173	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTCATTTTACTTTG	NA	False	NA	18	True	AATAAA	-18	NA	34346962	34362152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_34347233_34361963
Isoform_39908_140	chr13	+	4428	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	228	3188	26	201	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTAGCCATTTTTAAA	NA	False	NA	11	True	AATAAA	-18	NA	35059512	35086859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
Isoform_39912_3	chr13	+	7571	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	273	0	-36	0	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059557	35090047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
Isoform_39915_5	chr13	+	3724	20	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	60.6976065918861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059508	35090047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085657_35085980_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
Isoform_39916_13	chr13	+	4045	19	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	25	0	intron_retention	FALSE	canonical	3	35	junction_16	53.2687108493866	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059511	35090047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
Isoform_39918_3	chr13	+	5151	18	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	0	-1	intron_retention	FALSE	canonical	2	18	junction_16	56.3018311760073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059486	35090046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35087512_35087586_35088026_35088073_35089865
Isoform_39920_135	chr13	+	3427	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	154	-6	154	1	multi-exon	FALSE	canonical	3	72	junction_1	71.2031522398334	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	35925449	36058047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_39922_40	chr13	+	3608	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	-29	-4	-29	-1	multi-exon	FALSE	canonical	3	72	junction_1	71.2031522398334	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	35925266	36058045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_39932_11	chr13	+	2162	2	FSM	ENSMUSG00000050423.12	ENSMUST00000132661.2	2361	2	9	190	9	-190	multi-exon	FALSE	canonical	1	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCTCTGTGTTTCAT	NA	False	NA	NA	False	AGTAAA	-15	NA	36151844	36154181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_36151966_36152140
Isoform_39933_16	chr13	+	1691	7	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	85.194711625129	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301616	36721567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_36301777_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_39935_4	chr13	+	1764	8	FSM	ENSMUSG00000021420.14	ENSMUST00000224611.2	1750	8	-17	3	0	1	multi-exon	FALSE	canonical	0	0	junction_2	107.637524751798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATAGCATTTGTCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	36301840	36721568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_36301989_36332343_36332428_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_39936_3	chr13	+	1268	5	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	93.8216392949942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGAGTGAACTGCCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	36301838	36487015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36486822
Isoform_39937_242	chr13	+	1672	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	453	0	7	0	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301847	36721567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_39939_7	chr13	+	1891	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	235	-1	-7	1	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATAGCATTTGTCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	36301629	36721568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_3994_74	chr10	-	6498	27	FSM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	-71	6	-29	1	multi-exon	FALSE	canonical	3	61	junction_15	13.5705476423617	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTTGGTTTCGGGA	NA	False	NA	NA	False	AATAAA	-19	NA	90918595	90825178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
Isoform_39940_3	chr13	+	2155	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	-30	0	-30	0	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301364	36721567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_39941_5	chr13	+	1017	6	FSM	ENSMUSG00000021420.14	ENSMUST00000099582.4	962	6	25	-80	3	-1	multi-exon	FALSE	canonical	0	0	junction_1	98.7886633172046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTGACATAGCATTTGT	NA	False	NA	5	True	AATAAA	-16	NA	36301865	36721563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_36301989_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_39942_3	chr13	+	1724	8	NNC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	104.310955849345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301854	36721567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_36301989_36320335_36320395_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_39943_14	chr13	+	4465	10	NIC	ENSMUSG00000039087.18	novel	7437	10	NA	NA	-109	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	19.6920739836559	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	15	True	AATAAA	-15	NA	38009841	38116669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
Isoform_39944_19	chr13	+	8583	13	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-109	1	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	24.8678451463375	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACGGCACACGACCAAC	NA	False	NA	-4	True	AATAAA	-12	NA	38009841	38135971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
Isoform_39946_4	chr13	+	8514	12	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-194	1	combination_of_known_junctions	TRUE	canonical	3	18	junction_10	28.9242384557992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGACCAACCTGTGAGT	NA	False	NA	4	True	AATAAA	-20	NA	38009756	38135979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
Isoform_39947_11	chr13	+	4598	10	FSM	ENSMUSG00000039087.18	ENSMUST00000110238.10	7437	10	-13	2852	-13	0	multi-exon	FALSE	canonical	3	20	junction_1	27.5053305720281	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	15	True	AATAAA	-15	NA	38010000	38116669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
Isoform_39949_5	chr13	+	8713	13	FSM	ENSMUSG00000039087.18	ENSMUST00000128570.9	8436	13	-288	11	-11	0	multi-exon	FALSE	canonical	3	20	junction_1	29.1099448451708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38010002	38135970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
Isoform_39954_354	chr13	+	2477	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	259	2	9	-2	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGTTTGCATTCTTGC	4747	False	NA	16	True	AATAAA	-17	NA	38221229	38245407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
Isoform_39963_5	chr13	+	2766	17	NNC	ENSMUSG00000054889.11	novel	9592	24	NA	NA	0	3477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5.2618912949623	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACGTAAACAGTCGGAAC	6496	False	NA	NA	False	GATAAA	-28	NA	38335269	38369687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_38335771_38348739_38348843_38351491_38351641_38352581_38352757_38356754_38356884_38357793_38357845_38359043_38359206_38360371_38360477_38361162_38361259_38362410_38362536_38363023_38363177_38365073_38365229_38366177_38366305_38367090_38367293_38367921_38368149_38369071_38369239_38369548
Isoform_39964_4	chr13	+	3196	20	ISM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	-38	10094	-38	6249	5prime_fragment	FALSE	canonical	3	11	junction_1	4.38266542559285	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAGAAGAAGTGCATAAA	6458	False	NA	NA	False	NA	NA	NA	38335231	38372459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_38335771_38348739_38348843_38351491_38351641_38352581_38352757_38356754_38356884_38357793_38357845_38359043_38359206_38360371_38360477_38361162_38361259_38362409_38362536_38363023_38363177_38365073_38365229_38366177_38366305_38367090_38367293_38367921_38368149_38369071_38369239_38369548_38369688_38370570_38370765_38371716_38371880_38372425
Isoform_39966_4	chr13	+	4946	2	ISM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	41297	1	14224	-1	3prime_fragment	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTTGTGTTTTGATTTC	NA	False	NA	34	True	AATAAA	-16	NA	38376566	38382552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_38377632_38378671
Isoform_39969_3	chr13	+	5205	2	ISM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	41038	1	13965	-1	3prime_fragment	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTTGTGTTTTGATTTC	NA	False	NA	34	True	AATAAA	-16	NA	38376307	38382552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_38377632_38378671
Isoform_3997_17	chr10	-	6556	27	FSM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	-129	6	-21	1	multi-exon	FALSE	canonical	3	61	junction_15	13.5705476423617	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTTGGTTTCGGGA	NA	False	NA	NA	False	AATAAA	-19	NA	90918653	90825178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
Isoform_39970_9	chr13	+	4904	4	FSM	ENSMUSG00000021431.16	ENSMUST00000223814.2	3740	4	12	-1176	0	187	multi-exon	FALSE	canonical	3	222	junction_2	12.8149218578274	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCACTGTGCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	38388926	38399593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042
Isoform_39973_3	chr13	+	2497	10	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-1	72	intron_retention	FALSE	canonical	1	20	junction_5	82.099909023874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAATTGTACACTACAC	NA	False	NA	8	True	AATAAA	-16	NA	38388919	38411028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38398644_38399039_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
Isoform_39975_9	chr13	+	3490	9	NIC	ENSMUSG00000021431.16	novel	6689	8	NA	NA	0	-7	intron_retention	FALSE	canonical	1	67	junction_6	66.5450974903486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTAAGTTGTTTGAAG	NA	False	NA	16	True	ATTAAA	-17	NA	38388926	38411632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
Isoform_39976_16	chr13	+	2883	9	NIC	ENSMUSG00000021431.16	novel	6689	8	NA	NA	0	69	intron_retention	FALSE	canonical	1	67	junction_6	66.5450974903486	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCAAAATTGTACACTA	NA	False	NA	5	True	AATAAA	-13	NA	38388926	38411025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
Isoform_39978_51	chr13	+	1172	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	0	613	0	72	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAATTGTACACTACAC	NA	False	NA	8	True	AATAAA	-16	NA	38388920	38411028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
Isoform_39981_12	chr13	+	1785	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	-1	1	-1	1	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTGAAGTGCTGTGT	NA	False	NA	24	True	ATTAAA	-25	NA	38388919	38411640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
Isoform_39982_7	chr13	+	4376	8	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	0	84	intron_retention	FALSE	canonical	3	101	junction_4	51.7734468228489	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACACACTTAGATTTTC	NA	False	NA	20	True	AATAAA	-28	NA	38388920	38411040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38404753_38405210_38405370_38410849
Isoform_39984_3	chr13	+	4968	8	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	101	junction_4	51.7734468228489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTAAGTTGTTTGAA	NA	False	NA	15	True	ATTAAA	-16	NA	38388919	38411631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38404753_38405210_38405370_38410849
Isoform_39987_15	chr13	+	3481	7	FSM	ENSMUSG00000039004.7	ENSMUST00000171970.3	3593	7	-16	128	-16	-128	multi-exon	FALSE	canonical	1	4	junction_1	1.15470053837925	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTACTTACAGCCTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	38529066	38684150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_38530564_38653589_38653783_38668866_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
Isoform_3999_19	chr10	-	6542	27	FSM	ENSMUSG00000019979.13	ENSMUST00000020157.13	6577	27	36	-1	-30	1	multi-exon	FALSE	canonical	3	23	junction_26	18.4606169641815	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTTGGTTTCGGGA	NA	False	NA	NA	False	AATAAA	-19	NA	90918596	90825178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
Isoform_39992_67	chr13	+	4319	3	FSM	ENSMUSG00000021360.17	ENSMUST00000069958.15	3929	3	-389	-1	-389	0	multi-exon	FALSE	canonical	3	51	junction_1	65	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41040279	41114368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41041762_41107051_41107148_41111627
Isoform_39994_321	chr13	+	3987	3	FSM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	51	0	2	0	multi-exon	FALSE	canonical	3	123	junction_1	29	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41071127	41114368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41072278_41107051_41107148_41111627
Isoform_4000_6	chr10	-	6614	27	FSM	ENSMUSG00000019979.13	ENSMUST00000020157.13	6577	27	-30	-7	-30	0	multi-exon	TRUE	canonical	3	23	junction_26	18.4606169641815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCGGGATCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	90918662	90825172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
Isoform_40004_624	chr13	+	1465	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	250	7	7	1	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATACAGAGCTTAATTA	NA	False	NA	NA	False	AGTAAA	-21	NA	41154748	41166484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
Isoform_40006_266	chr13	+	1716	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	-1	7	-1	1	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATACAGAGCTTAATTA	NA	False	NA	NA	False	AGTAAA	-21	NA	41154497	41166484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
Isoform_40011_47	chr13	+	1474	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	267	-19	24	19	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCGGTGCTTGGGATGA	NA	False	NA	NA	False	AATACA	-18	NA	41154765	41166510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
Isoform_40022_408	chr13	+	900	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	10	4	10	-4	multi-exon	FALSE	canonical	3	613	junction_2	43.7154434954056	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	11	True	AATAAA	-18	NA	41169777	41176058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
Isoform_40023_76	chr13	+	841	5	NIC	ENSMUSG00000021361.8	novel	914	6	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	251.069089097005	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	11	True	AATAAA	-18	NA	41169777	41176058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_41169875_41171181_41171259_41171831_41171934_41174594_41174683_41175581
Isoform_40027_33	chr13	+	4164	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	299	20	299	-20	multi-exon	FALSE	canonical	3	181	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAAAATGAAAACAAGTA	NA	False	NA	NA	False	TTTAAA	-13	NA	41403618	41430033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41403791_41426041
Isoform_40028_47	chr13	+	4181	3	NNC	ENSMUSG00000091264.4	novel	4483	2	NA	NA	321	3267	intron_retention	FALSE	non_canonical	0	0	junction_2	90.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATGTGAGCCACTA	NA	False	NA	NA	False	NA	NA	NA	41403640	41433320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_41403791_41426041_41430037_41433284
Isoform_40033_30	chr13	+	4504	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	-24	3	-24	-3	multi-exon	FALSE	canonical	3	181	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACTTGTGCCTCATTGG	NA	False	NA	NA	False	AATAAA	-16	NA	41403295	41430050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41403791_41426041
Isoform_40035_23	chr13	+	7501	3	FSM	ENSMUSG00000087370.4	ENSMUST00000129449.3	7168	3	-333	0	-24	0	multi-exon	FALSE	canonical	3	21	junction_2	1.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCTGAACTCCTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	41759358	41794831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41759789_41781453_41781625_41787931
Isoform_40037_4	chr13	+	7344	2	FSM	ENSMUSG00000087370.4	ENSMUST00000221694.2	602	2	-46	-6696	-46	-8	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTATACAGTGCTGAA	NA	False	NA	NA	False	AATAAA	-10	NA	41759336	41794823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_41759789_41787931
Isoform_40038_3	chr13	+	8751	9	FSM	ENSMUSG00000021366.9	ENSMUST00000060148.6	8753	9	2	0	2	0	multi-exon	FALSE	canonical	1	3	junction_2	8.24526379202024	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGGTGCTTACGTCTC	NA	False	NA	2	True	AGTAAA	-15	NA	42205498	42338502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_42205567_42208875_42209019_42276635_42276690_42307855_42313795_42316826_42316961_42317692_42317869_42321037_42321140_42334907_42335408_42336867
Isoform_40039_12	chr13	+	2181	5	FSM	ENSMUSG00000021367.9	ENSMUST00000021796.9	2139	5	-44	2	-44	-2	multi-exon	FALSE	canonical	1	1	junction_4	2.44948974278318	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACTTGTGAATTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	42454907	42461464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_42455435_42457032_42457202_42458421_42458581_42458730_42458845_42460252
Isoform_40043_48	chr13	+	1396	9	FSM	ENSMUSG00000054021.7	ENSMUST00000223194.2	1398	9	2	0	2	0	multi-exon	FALSE	canonical	3	17	junction_1	63.0811729044411	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	NA	False	NA	10	True	ATTAAA	-22	NA	43518983	43548679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
Isoform_40044_5	chr13	+	1429	3	ISM	ENSMUSG00000054021.7	ENSMUST00000220458.2	435	4	-3	3738	-3	-3738	5prime_fragment	FALSE	canonical	3	180	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGTGTATGTGTGTAT	NA	False	NA	NA	False	ATTAAA	-25	NA	43519100	43526470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_43519217_43524194_43524345_43525307
Isoform_40045_161	chr13	+	1472	9	NIC	ENSMUSG00000054021.7	novel	1579	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_8	20.7710736361893	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	NA	False	NA	10	True	ATTAAA	-22	NA	43519103	43548679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
Isoform_40056_888	chr13	+	934	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-6	872	-6	-5	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTGGTCACATTTCT	NA	False	NA	26	True	TATAAA	-26	NA	43551859	43555465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
Isoform_40063_21	chr13	+	1209	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-6	597	-6	170	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCTAGTACCTTTACC	NA	False	NA	8	True	AATAAA	-23	NA	43551859	43555740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
Isoform_40067_83	chr13	+	739	7	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	17	-8	intron_retention	FALSE	canonical	3	1367	junction_3	68.3408532447629	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACAGCTGGTCACATT	NA	False	NA	23	True	TATAAA	-23	NA	43552127	43555462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
Isoform_40073_3	chr13	+	2065	5	FSM	ENSMUSG00000015396.5	ENSMUST00000015540.4	2477	5	411	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTGTTCTTCTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	43938661	43956607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_43938727_43938821_43938944_43951008_43951205_43953077_43953185_43955032
Isoform_40076_19	chr13	+	5681	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	112	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	184.132198886199	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	8757	False	NA	11	True	AATAAA	-13	NA	44883122	45075114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_44883254_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_40086_16	chr13	+	5646	19	FSM	ENSMUSG00000038518.16	ENSMUST00000173704.8	4135	19	19	-1530	19	-2	multi-exon	FALSE	canonical	3	41	junction_1	182.476448674857	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	9903	False	NA	11	True	AATAAA	-13	NA	44884268	45075114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_44884365_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_40091_19	chr13	+	5626	19	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	185.168733528485	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	9947	False	NA	11	True	AATAAA	-13	NA	44884312	45075114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_44884389_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_40096_26	chr13	+	5320	19	FSM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	-30	-271	19	271	multi-exon	FALSE	canonical	3	65	junction_1	177.530035712966	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	9903	False	NA	17	True	AATAAA	-20	NA	44884268	45074742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_40098_42	chr13	+	5626	19	FSM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	36	-643	0	-2	multi-exon	FALSE	canonical	3	65	junction_1	177.530035712966	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	9969	False	NA	11	True	AATAAA	-13	NA	44884334	45075114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_40105_50	chr13	+	5990	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	1	6	1	-3	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	NA	False	NA	10	True	AATAAA	-12	NA	44884747	45075113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_40106_261	chr13	+	5927	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	63	7	-34	-4	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTTGTCTGTCTTGTG	NA	False	NA	9	True	AATAAA	-11	NA	44884809	45075112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_40180_95	chr13	+	3060	7	FSM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	-2	7	-2	-7	multi-exon	FALSE	canonical	3	33	junction_3	5.98377435700541	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAACTGGGCCTTTGTG	4393	False	NA	NA	False	AATAAA	-8	NA	45543215	45565491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_45543520_45544664_45544856_45557875_45558062_45559368_45559567_45560032_45560198_45561831_45562253_45563896
Isoform_40183_62	chr13	+	1567	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	13	0	13	0	multi-exon	FALSE	canonical	3	46	junction_4	10.0428768288773	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	False	NA	22	True	AATATA	-16	NA	45660932	45699858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
Isoform_40186_6	chr13	+	3036	4	FSM	ENSMUSG00000038132.7	ENSMUST00000037923.5	3086	4	45	5	45	-5	multi-exon	FALSE	canonical	1	3	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGCTGTTGCATCAG	NA	False	NA	NA	False	ATTAAA	-11	NA	46571954	46584566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_46572675_46573750_46573875_46575326_46575382_46582429
Isoform_40187_5	chr13	+	2848	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	224	641	-53	5	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAATTCTCATTTTGGTT	NA	False	NA	NA	False	AGTAAA	-37	NA	46655547	46803116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
Isoform_40188_6	chr13	+	1736	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	248	1729	-29	26	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGATTTTACTTC	NA	False	NA	NA	False	NA	NA	NA	46655571	46802028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
Isoform_40189_4	chr13	+	3489	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	224	0	-53	0	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTTTTGTTGTCAATA	NA	False	NA	NA	False	AATAAA	-7	NA	46655547	46803757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
Isoform_40194_354	chr13	+	3695	5	FSM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	-34	3	-34	-3	multi-exon	FALSE	canonical	3	172	junction_4	10.8972473588517	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATGTCAACAGTGTTGT	NA	False	NA	4	True	AATAAA	-4	NA	46822963	46831529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
Isoform_40200_5	chr13	+	2177	13	ISM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	40	16161	-31	-3165	5prime_fragment	FALSE	canonical	3	35	junction_2	9.55212309152031	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGCTGCGACTGTGG	1201	False	NA	NA	False	ATTAAA	-14	NA	47197014	47222594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939
Isoform_40201_102	chr13	+	4248	22	NNC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_1	11.7560232065377	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCAACCTCCTTTCCA	1201	False	NA	5	True	AATAAA	-15	NA	47197014	47238076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_47197096_47197115_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
Isoform_40203_8	chr13	+	4276	22	NNC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	17	-8	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_1	11.7560232065377	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTCCTTTCCAGTCCT	1178	False	NA	10	True	AATAAA	-20	NA	47196991	47238081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_47197096_47197115_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
Isoform_40206_74	chr13	+	1542	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-111	2418	-111	-2418	multi-exon	FALSE	canonical	3	109	junction_1	7	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTATGTGTCTGTTTTT	NA	False	NA	3	True	ATTAAA	-12	NA	48414592	48417084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_48415415_48415760_48415824_48416427
Isoform_40208_55	chr13	+	2447	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-111	1513	-111	-1513	multi-exon	FALSE	canonical	3	109	junction_1	7	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACTTCTGATGTGATT	NA	False	NA	3	True	ATTAAA	-22	NA	48414592	48417989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_48415415_48415760_48415824_48416427
Isoform_4021_899	chr10	-	1363	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	32	217	-5	0	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959889	90952652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
Isoform_40211_18	chr13	+	3962	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-111	-2	-111	2	multi-exon	FALSE	canonical	3	109	junction_1	7	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAAGTTTGTGGTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	48414592	48419504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_48415415_48415760_48415824_48416427
Isoform_40213_6	chr13	+	1245	4	FSM	ENSMUSG00000037966.16	ENSMUST00000131280.2	706	4	-52	-487	-1	2	multi-exon	FALSE	canonical	2	4	junction_2	185.030327844443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTTCCATGTGCCACC	NA	False	NA	15	True	AATAAA	-17	NA	49340959	49349722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_49341114_49347211_49347441_49348314_49348534_49349079
Isoform_40214_405	chr13	+	1186	4	FSM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	6	-5	6	5	multi-exon	FALSE	canonical	3	352	junction_2	21.013223349966	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCCATGTGCCACCCTA	NA	False	NA	18	True	AATAAA	-20	NA	49340966	49349725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_49341114_49347211_49347441_49348369_49348534_49349079
Isoform_40215_14	chr13	+	2100	3	NIC	ENSMUSG00000037966.16	novel	1187	4	NA	NA	-16	8	intron_retention	FALSE	canonical	3	395	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTGCCACCCTATAC	NA	False	NA	21	True	AATAAA	-23	NA	49340984	49349728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_49341114_49347211_49348534_49349079
Isoform_40218_34	chr13	+	6334	7	FSM	ENSMUSG00000037933.17	ENSMUST00000048544.14	6309	7	-28	3	-28	-3	multi-exon	FALSE	canonical	3	26	junction_2	11.1616904335021	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCACATGCGTGCCCT	1400	False	NA	8	True	AATAAA	-15	NA	49495032	49540492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518
Isoform_4022_3873	chr10	-	1341	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	54	217	-2	0	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	3873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959867	90952652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
Isoform_40222_6	chr13	+	4703	9	NIC	ENSMUSG00000037933.17	novel	4588	8	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_8	20.4110111214511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGTGCCCTCTGTGATT	1410	False	NA	16	True	AATAAA	-23	NA	49495042	49540500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49537813_49537902_49538446
Isoform_40224_69	chr13	+	4593	8	FSM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	-6	1	-1	0	multi-exon	FALSE	canonical	3	26	junction_2	11.2213353638031	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGTGCCCTCTGTGATTG	1433	False	NA	17	True	AATAAA	-24	NA	49495065	49540501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
Isoform_40227_11	chr13	+	2890	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	20	1511	-9	72	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATCGTTCGATTTT	NA	False	NA	83	True	NA	NA	NA	49574744	49616538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
Isoform_40228_183	chr13	+	2828	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	7	1586	7	-3	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTATAGAGTTTGTTA	NA	False	NA	8	True	NA	NA	NA	49574731	49616463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
Isoform_4023_104	chr10	-	1519	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	92	1	-10	-1	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTAGTTTTATTTTTTTG	NA	False	NA	-1	True	ATTAAA	-17	NA	90959829	90952436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
Isoform_40234_8	chr13	+	4438	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATGACATTTTCAACT	NA	False	NA	NA	False	ATTAAA	-29	NA	49574707	49618049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
Isoform_40235_6	chr13	+	839	7	NNC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	-7	-24835	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	51.3173676470473	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	49574717	49591542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49591351
Isoform_40240_4	chr13	+	854	6	ISM	ENSMUSG00000021392.9	ENSMUST00000222197.2	4368	17	244	18730	-11	-1139	5prime_fragment	FALSE	canonical	3	136	junction_5	6.18384993349612	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATAAAATATCCTTTG	NA	False	NA	NA	False	NA	NA	NA	49806797	49813484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425
Isoform_40241_4	chr13	+	4569	17	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.228359842646	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTTTATTCCTA	NA	False	NA	3	True	AATAAA	-9	NA	49806588	49832451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813494_49814433_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
Isoform_40243_6	chr13	+	2358	11	ISM	ENSMUSG00000021392.9	ENSMUST00000021824.8	4242	18	8766	21	-4401	-9	3prime_fragment	FALSE	canonical	3	121	junction_7	23.7	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAATACTCTTTACCTT	844	False	NA	1	True	AATAAA	-28	NA	49815591	49832470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
Isoform_40248_3114	chr13	+	4384	34	FSM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	44	-2	14	2	multi-exon	FALSE	canonical	1	598	junction_17	241.366305222171	3114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAGTAGTTATTCTCCC	NA	False	NA	32	True	ATTAAA	-33	NA	49835619	49887745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
Isoform_40255_142	chr13	+	4402	34	NIC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	31	-7	combination_of_known_junctions	FALSE	canonical	1	120	junction_1	357.515439185776	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTTGGAAGTAGT	NA	False	NA	23	True	ATTAAA	-24	NA	49835697	49887736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
Isoform_4026_69	chr10	-	2855	7	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1248	junction_6	1076.15746472758	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959867	90952652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90959569_90959777
Isoform_40304_17	chr13	+	1788	10	FSM	ENSMUSG00000037816.11	ENSMUST00000046974.5	1798	10	22	-12	0	1	multi-exon	FALSE	canonical	3	14	junction_8	4.29469957557504	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCATGAACTTTGCTG	NA	False	NA	NA	False	ATTAAA	-33	NA	50571921	50587817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
Isoform_40305_3	chr13	+	1908	10	NIC	ENSMUSG00000037816.11	novel	2316	11	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	7.55392139190379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCATGAACTTTGCTGT	NA	False	NA	NA	False	ATTAAA	-34	NA	50571916	50587818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_50572024_50573875_50574028_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
Isoform_40306_5	chr13	+	1931	10	NIC	ENSMUSG00000037816.11	novel	2316	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	7.03957069398096	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACACATTCCTGCATGAA	NA	False	NA	NA	False	ATTAAA	-25	NA	50571921	50587809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_50572024_50573875_50574065_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
Isoform_40308_1214	chr13	+	4433	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	1	0	1	0	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51254916	51306582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
Isoform_4031_63	chr10	-	5069	6	NIC	ENSMUSG00000061904.13	novel	1341	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1248	junction_5	1149.29219957329	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959867	90952653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90959569_90959777
Isoform_40311_167	chr13	+	4523	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	-88	-1	-88	1	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGGCTGTGAACTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	51254827	51306583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
Isoform_40329_92	chr13	+	3669	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	127	667	127	-667	multi-exon	FALSE	canonical	3	36	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAGGCCTGTGTGGTA	NA	False	NA	11	True	AATAAA	-29	NA	51562801	51576166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_51562982_51572677
Isoform_40331_41	chr13	+	3723	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	73	667	73	-667	multi-exon	FALSE	canonical	3	36	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAGGCCTGTGTGGTA	NA	False	NA	11	True	AATAAA	-29	NA	51562747	51576166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_51562982_51572677
Isoform_40332_1240	chr13	+	595	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	93	4	93	-4	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACCATTGTTGAAATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	51799360	51804692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_51799508_51803620_51803749_51804372
Isoform_40334_252	chr13	+	627	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	64	1	64	-1	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTGTTGAAATTAATTT	NA	False	NA	NA	False	AATAAA	-23	NA	51799331	51804695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_51799508_51803620_51803749_51804372
Isoform_40336_24	chr13	+	691	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	93	-92	93	92	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAATATTAAGCTCCA	NA	False	NA	NA	False	AATAAA	-41	NA	51799360	51804788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_51799508_51803620_51803749_51804372
Isoform_40342_4	chr13	+	1328	2	ISM	ENSMUSG00000035139.15	ENSMUST00000127360.2	604	5	-67	3186	-11	-3186	5prime_fragment	FALSE	canonical	3	173	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCAGCAGTAT	5527	False	NA	NA	False	NA	NA	NA	51805765	51807879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_51805857_51806642
Isoform_40344_249	chr13	+	3303	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	24	1	-20	-1	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	5518	False	NA	7	True	AATAAA	-19	NA	51805756	51838079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
Isoform_40348_21	chr13	+	3200	17	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	37.006703362364	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5512	False	NA	8	True	AATAAA	-20	NA	51805750	51838080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
Isoform_40351_5	chr13	+	3416	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.6601770778239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5516	False	NA	8	True	AATAAA	-20	NA	51805754	51838080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_51805857_51806642_51806902_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
Isoform_40353_87	chr13	+	1072	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	0	-1	0	1	multi-exon	FALSE	canonical	3	52	junction_3	4.02768199119819	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTTAATGCCTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	52000713	52002505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
Isoform_40354_11	chr13	+	3577	7	ISM	ENSMUSG00000113211.2	ENSMUST00000220691.2	3270	8	0	-1	0	1	intron_retention	FALSE	canonical	2	4	junction_2	2.74873708374511	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATGTGTGTATAATC	NA	False	NA	NA	False	NA	NA	NA	52250776	52278195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192
Isoform_40355_4	chr13	+	3423	8	NNC	ENSMUSG00000113211.2	novel	3270	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.69776545872708	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATGTGTGTATAATC	NA	False	NA	NA	False	NA	NA	NA	52250777	52278195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192_52276931_52277083
Isoform_40356_4	chr13	+	3428	8	NNC	ENSMUSG00000113211.2	novel	3270	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.69776545872708	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGTGTGTATAATCA	NA	False	NA	NA	False	NA	NA	NA	52250776	52278196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192_52276931_52277080
Isoform_40357_4	chr13	+	2424	13	ISM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	325	5184	-5	-6	5prime_fragment	FALSE	canonical	3	17	junction_6	23.0487104965886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAACAATCTCTGAGCC	NA	False	NA	NA	False	ATTAAA	-25	NA	52737533	52797644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
Isoform_40358_10	chr13	+	3785	14	FSM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	286	1292	22	-1282	multi-exon	FALSE	canonical	3	17	junction_6	22.2489943925403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAAGTTATTTTGTTG	NA	False	NA	21	True	NA	NA	NA	52737494	52801536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_40360_3	chr13	+	5027	14	FSM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	325	11	-5	-1	multi-exon	FALSE	canonical	3	17	junction_6	22.2489943925403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTGTGATGACCTTTA	NA	False	NA	NA	False	AATAAA	-11	NA	52737533	52802817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_40363_3	chr13	+	2792	12	NIC	ENSMUSG00000021457.15	novel	2519	13	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.5124625838599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCTCTGAGCCAATTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	52737102	52797650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
Isoform_40364_8	chr13	+	2397	12	NIC	ENSMUSG00000021457.15	novel	2519	13	NA	NA	22	-3	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.5124625838599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAATCTCTGAGCCAAT	NA	False	NA	NA	False	ATTAAA	-28	NA	52737494	52797647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
Isoform_40365_9	chr13	+	4101	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-100	-1283	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGAAGTTATTTTGTT	NA	False	NA	20	True	NA	NA	NA	52737108	52801535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_40366_10	chr13	+	4014	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-12	-1282	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAAGTTATTTTGTTG	NA	False	NA	21	True	NA	NA	NA	52737196	52801536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_40369_9	chr13	+	5382	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-102	-4	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTCTTGTGATGACCT	NA	False	NA	NA	False	AATAAA	-8	NA	52737106	52802814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_40370_16	chr13	+	4994	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	22	-4	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTCTTGTGATGACCT	NA	False	NA	NA	False	AATAAA	-8	NA	52737494	52802814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_40372_27	chr13	+	3716	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	22	-1282	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAAGTTATTTTGTTG	NA	False	NA	21	True	NA	NA	NA	52737494	52801536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_40378_524	chr13	+	2800	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	-21	4	-21	-4	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54225866	54262357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
Isoform_40381_850	chr13	+	2779	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	1	3	1	-3	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACTGTCTCTTACTT	NA	False	NA	NA	False	AATAAA	-15	NA	54225888	54262358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
Isoform_40391_45	chr13	+	2816	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	341.21576509169	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54225916	54262357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
Isoform_40393_29	chr13	+	2871	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	341.21576509169	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54225861	54262357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
Isoform_40408_56	chr13	+	4803	10	FSM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	15	1	-10	-1	multi-exon	FALSE	canonical	3	26	junction_3	7.33333333333333	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTAGACTCCAGGGCTTC	NA	False	NA	16	True	AATAAA	-16	NA	54651606	54699102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
Isoform_40409_19	chr13	+	4848	10	FSM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	-30	1	-30	-1	multi-exon	FALSE	canonical	3	26	junction_3	7.33333333333333	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTAGACTCCAGGGCTTC	NA	False	NA	16	True	AATAAA	-16	NA	54651561	54699102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
Isoform_40414_647	chr13	+	2649	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	32	-1635	0	1635	multi-exon	FALSE	canonical	3	59	junction_3	14.6363322667334	647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGAAGTGACTTTACT	2706	False	NA	8	True	AATAAA	-14	NA	54722859	54730576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
Isoform_40418_542	chr13	+	633	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	6	9	6	-9	multi-exon	FALSE	canonical	3	1416	junction_1	0	542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGAACTATTTCTTAA	5984	False	NA	14	True	AATAAA	-18	NA	54738025	54738962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54738233_54738536
Isoform_4042_989	chr10	-	3514	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	19	0	5	0	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007425	90983432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
Isoform_40421_29	chr13	+	4358	12	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-10	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	187.610022816365	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATAAAACCAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	54769626	54811867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_40429_41	chr13	+	4226	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	-10	-2468	-10	-9	multi-exon	FALSE	canonical	3	159	junction_3	87.926617130423	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATAAAACCAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	54769626	54811867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_40430_17	chr13	+	1892	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	-36	-108	4	108	multi-exon	TRUE	canonical	3	159	junction_3	87.926617130423	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCGCATCCTTTGCC	NA	False	NA	20	True	AATAAA	-13	NA	54769600	54809507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_40432_121	chr13	+	4309	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	4	9	4	-9	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATAAAACCAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	54769600	54811867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_40435_339	chr13	+	4277	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	36	9	-4	-9	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATAAAACCAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	54769632	54811867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_40443_54	chr13	+	4144	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-10	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	175.481418945317	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATAAAACCAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	54769626	54811867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_40451_257	chr13	+	1490	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	88	7	2	1	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937277	54944582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
Isoform_40452_30	chr13	+	1550	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	28	7	2	1	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937217	54944582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
Isoform_40453_68	chr13	+	1133	9	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	98	junction_8	99.0959131347	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937255	54944582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
Isoform_40454_7	chr13	+	1359	7	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	16	1	intron_retention	FALSE	canonical	3	15	junction_6	140.730731856581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937291	54944582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943969
Isoform_40455_23	chr13	+	1510	8	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	-22	1	intron_retention	FALSE	canonical	3	33	junction_5	126.228493823943	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937253	54944582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943227_54943272_54943778_54943896_54943969
Isoform_40456_10	chr13	+	1820	7	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	-20	1	intron_retention	FALSE	canonical	3	379	junction_1	14.3488288333539	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937255	54944582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
Isoform_40458_9	chr13	+	1316	6	FSM	ENSMUSG00000025875.15	ENSMUST00000163796.8	712	6	-22	-582	-22	1	multi-exon	FALSE	canonical	2	9	junction_1	159.188441791482	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937253	54944582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_54937495_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
Isoform_40462_11	chr13	+	3839	15	FSM	ENSMUSG00000025876.16	ENSMUST00000109994.9	3827	15	-12	0	-12	0	multi-exon	TRUE	canonical	1	4	junction_1	2.26778683805536	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGAGTGTCGCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	55097211	55153831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55097545_55138692_55138915_55143609_55143754_55143972_55144077_55144216_55144398_55145728_55145894_55147148_55147338_55147434_55147738_55150278_55150367_55150645_55150815_55150995_55151230_55151354_55151505_55151590_55151756_55152290_55152470_55152618
Isoform_40464_48	chr13	+	3388	7	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-5	2	intron_retention	FALSE	canonical	3	20	junction_4	17.8013732304249	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCGATGTGTGCGCTCT	14	False	NA	13	True	NA	NA	NA	55253134	55282640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55278346_55278441_55280119
Isoform_40466_3	chr13	+	3520	6	FSM	ENSMUSG00000021481.12	ENSMUST00000161077.2	765	6	-74	-2681	-2	231	multi-exon	FALSE	canonical	2	3	junction_5	26.8223787162884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAAAAATAGTCTGTCT	17	False	NA	NA	False	AATAAA	-26	NA	55253137	55282869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55280119
Isoform_40467_102	chr13	+	3368	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	-30	-5	-14	5	multi-exon	FALSE	canonical	3	43	junction_4	9.82202739877171	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGATGTGTGCGCTCTTCC	5180	False	NA	16	True	NA	NA	NA	55253109	55282643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
Isoform_40470_3	chr13	+	3481	6	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-1	241	intron_retention	FALSE	canonical	2	3	junction_5	24.2272573767647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTCTTTGTATTGTG	18	False	NA	NA	False	AATAAA	-36	NA	55253138	55282879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55280119
Isoform_40471_4	chr13	+	3358	7	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-15	-3	intron_retention	FALSE	canonical	1	3	junction_3	24.1499942489066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATCCGATGTGTGC	5179	False	NA	8	True	NA	NA	NA	55253108	55282635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263295_55263438_55270142_55270329_55278346_55278441_55280119
Isoform_40472_19	chr13	+	3195	6	FSM	ENSMUSG00000021481.12	ENSMUST00000162476.8	1112	6	-11	-2072	-5	2	multi-exon	FALSE	canonical	2	4	junction_3	25.663982543635	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCGATGTGTGCGCTCT	14	False	NA	13	True	NA	NA	NA	55253134	55282640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55270142_55270329_55278346_55278441_55280119
Isoform_40475_8	chr13	+	3101	18	FSM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	195	28	195	-28	multi-exon	FALSE	canonical	2	5	junction_4	3.40364144505634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAAATCTCTGTGTGC	NA	False	NA	NA	False	TATAAA	-10	NA	55300647	55316544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55300741_55303250_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
Isoform_40477_14	chr13	+	3042	17	ISM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	2791	1	-252	-1	3prime_fragment	FALSE	canonical	2	5	junction_3	3.50836055017155	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTGTGTGGCAGGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	55303243	55316571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
Isoform_40479_9	chr13	+	2593	5	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	1	intron_retention	FALSE	canonical	3	116	junction_1	64.355943781441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTCTTTTTTTTCC	NA	False	NA	NA	False	AATACA	-16	NA	55357594	55388661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502
Isoform_4048_31	chr10	-	3551	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	41	-59	11	59	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATGTGGTATTTATT	NA	False	NA	57	True	CATAAA	-22	NA	91007403	90983373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
Isoform_40482_11	chr13	+	914	6	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	91.9469412215545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTCTTTTTTTTCC	NA	False	NA	NA	False	AATACA	-16	NA	55357594	55388661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
Isoform_40486_13	chr13	+	6002	23	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-5046	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	31.62764378261	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTATATAGAAACAGAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	55357594	55458522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
Isoform_40487_24	chr13	+	7732	24	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-1739	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATTCGATTCCACT	NA	False	NA	23	True	AATAAA	-20	NA	55357594	55461829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
Isoform_40488_7	chr13	+	12039	24	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	NA	False	NA	13	True	AGTAAA	-16	NA	55357594	55466136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
Isoform_40489_4	chr13	+	7771	25	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-1738	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATTCGATTCCACTG	NA	False	NA	24	True	AATAAA	-21	NA	55357594	55461830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
Isoform_40491_5	chr13	+	3335	4	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	0	77478	0	0	5prime_fragment	FALSE	canonical	3	116	junction_1	68.9025076144225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTGTCTTTTTTTTC	NA	False	NA	NA	False	AATACA	-15	NA	55357594	55388660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502
Isoform_40492_3	chr13	+	1656	5	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_4	93.1987124374581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTGTCTTTTTTTTC	NA	False	NA	NA	False	AATACA	-15	NA	55357594	55388660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502_55386676_55388354
Isoform_40493_4	chr13	+	8473	23	FSM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	0	4311	0	-1741	multi-exon	FALSE	canonical	3	116	junction_1	35.1453887033198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGGAATTCGATTCCA	NA	False	NA	21	True	AATAAA	-18	NA	55357594	55461827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
Isoform_40495_3	chr13	+	953	2	ISM	ENSMUSG00000021488.9	ENSMUST00000224918.2	1001	6	-9	26882	-9	655	5prime_fragment	FALSE	canonical	3	116	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAGACAGCCCTCCTC	NA	False	NA	NA	False	AATAAA	-26	NA	55359622	55361778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_55359814_55361016
Isoform_40497_7	chr13	+	2704	5	ISM	ENSMUSG00000021488.9	ENSMUST00000224918.2	1001	6	-24	0	-24	0	intron_retention	FALSE	canonical	3	116	junction_1	64.355943781441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTGTCTTTTTTTTC	NA	False	NA	NA	False	AATACA	-15	NA	55359607	55388660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502
Isoform_40506_15	chr13	+	7817	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-2	-1744	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGAATGGAATTCGATT	NA	False	NA	18	True	AATAAA	-15	NA	55359629	55461824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
Isoform_40507_9	chr13	+	12135	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55359625	55466138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
Isoform_40508_3	chr13	+	7602	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-45	-2002	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTCCCCAGGGTACCA	NA	False	NA	NA	False	AGTAAA	-17	NA	55359586	55461566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
Isoform_40510_6	chr13	+	7904	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-38	-1731	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTCCACTGGTCAACT	NA	False	NA	31	True	AATAAA	-28	NA	55359593	55461837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
Isoform_40511_3	chr13	+	3450	4	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-26	1	intron_retention	FALSE	canonical	3	116	junction_1	68.9025076144225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTCTTTTTTTTCC	NA	False	NA	NA	False	AATACA	-16	NA	55359605	55388661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55359814_55361016_55361964_55381707_55381844_55386502
Isoform_40517_3	chr13	+	6359	3	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	19457	-3	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCCTTGCCCTGTGT	8246	False	NA	12	True	AGTAAA	-15	NA	55458237	55466135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_55458355_55459758_55459797_55459931
Isoform_40518_2386	chr13	+	1111	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1533	0	14	0	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5567	False	NA	18	True	NA	NA	NA	55469845	55473085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
Isoform_40520_207	chr13	+	1140	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1504	0	-15	0	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5538	False	NA	18	True	NA	NA	NA	55469816	55473085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
Isoform_40533_154	chr13	+	3466	16	FSM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	-146	-1151	-23	0	multi-exon	FALSE	canonical	3	190	junction_15	75.6883669323687	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593127	55608740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
Isoform_40534_746	chr13	+	3016	16	FSM	ENSMUSG00000074886.12	ENSMUST00000001115.16	2994	16	-22	0	-22	0	multi-exon	FALSE	non_canonical	0	0	junction_15	121.188264925097	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593128	55608740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
Isoform_40539_371	chr13	+	3015	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224118.2	1997	16	-146	-872	-23	0	multi-exon	FALSE	canonical	3	104	junction_15	96.0563723376365	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593127	55608740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
Isoform_40545_18	chr13	+	2882	16	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	2	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_15	158.985729618171	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	3	True	NA	28	True	AATACA	-30	NA	55593160	55608740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55600049_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
Isoform_40549_18	chr13	+	3308	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	0	intron_retention	FALSE	non_canonical	0	0	junction_14	125.436218445707	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593127	55608740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
Isoform_40560_3	chr13	+	1351	2	ISM	ENSMUSG00000034686.9	ENSMUST00000046533.9	1359	3	7395	-14	7395	14	3prime_fragment	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGCTGCTTTAAGCACA	9541	False	NA	NA	False	AATAAA	-36	NA	55619474	55620981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_55620250_55620405
Isoform_40562_553	chr13	+	1399	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	-9	30	2	-20	multi-exon	FALSE	canonical	3	616	junction_1	31.3847096529504	553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	AATGAA	-30	NA	55740972	55745480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
Isoform_40566_184	chr13	+	2130	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	1	-1	1	0	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	6	True	AATAAA	-19	NA	55747878	55758256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
Isoform_40574_5	chr13	+	2049	5	FSM	ENSMUSG00000021504.15	ENSMUST00000100764.10	2195	5	143	3	-26	-2	multi-exon	FALSE	canonical	2	2	junction_4	40.0686910192983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACACTGGCAAGGAACT	NA	False	NA	3	True	AATAAA	-16	NA	55747851	55758253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55757031
Isoform_40576_14	chr13	+	3071	5	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	-21	0	intron_retention	FALSE	canonical	3	87	junction_3	9.49670995661129	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	6	True	AATAAA	-19	NA	55747856	55758256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55748006_55751832_55752196_55755009_55756239_55756510_55756616_55757031
Isoform_40577_5	chr13	+	1878	5	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	41.0213359119373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACACTGGCAAGGAACT	NA	False	NA	3	True	AATAAA	-16	NA	55747901	55758253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55748006_55751832_55752196_55756154_55756239_55756510_55756616_55757031
Isoform_40578_16	chr13	+	2048	6	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	32.2391066873758	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	6	True	AATAAA	-19	NA	55747860	55758256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55748006_55751932_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
Isoform_40579_6	chr13	+	2949	5	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	17	junction_1	35.4356811702555	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	6	True	AATAAA	-19	NA	55747878	55758256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55748006_55751932_55752196_55755009_55756239_55756510_55756616_55757031
Isoform_40580_129	chr13	+	1382	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	4	-4	4	4	multi-exon	FALSE	canonical	3	82	junction_2	4.49691252107735	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTCTGTACATTTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	55770821	55780228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
Isoform_40589_62	chr13	+	3553	23	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-11	-2131	intron_retention	FALSE	canonical	3	86	junction_19	66.2512279630466	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCCTTTCAGTGGAATT	NA	False	NA	18	True	AATAAA	-27	NA	55782828	55826938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
Isoform_40592_28	chr13	+	5684	23	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-11	0	intron_retention	FALSE	canonical	3	86	junction_19	66.2512279630466	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55782828	55829069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
Isoform_40595_109	chr13	+	5687	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-11	0	-11	0	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55782828	55829069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
Isoform_40598_281	chr13	+	3548	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-13	2141	-13	-2141	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCACTGACCTGTCCTTT	NA	False	NA	8	True	AATAAA	-17	NA	55782826	55826928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
Isoform_40604_10	chr13	+	5170	22	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-17	-2141	intron_retention	FALSE	non_canonical	0	0	junction_18	83.319971717919	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCACTGACCTGTCCTTT	NA	False	NA	8	True	AATAAA	-17	NA	55782822	55826928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
Isoform_40620_271	chr13	+	4643	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	3	6	3	-6	multi-exon	FALSE	canonical	3	233	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGCTCTGTACTACTT	NA	False	NA	13	True	AATAAA	-13	NA	55840939	55851307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55841161_55846885
Isoform_40627_314	chr13	+	1463	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	68	-4	68	4	multi-exon	FALSE	canonical	3	237	junction_2	13.4257215820976	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTCGCTTGTTTCT	NA	False	NA	22	True	AATAAA	-18	NA	55862530	55874044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
Isoform_40629_28	chr13	+	652	4	FSM	ENSMUSG00000021496.13	ENSMUST00000021958.6	544	4	-109	1	-109	-1	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGAGTTATTTGTCA	NA	False	NA	12	True	AATACA	-15	NA	55875071	55924640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
Isoform_40630_142	chr13	+	554	4	FSM	ENSMUSG00000021496.13	ENSMUST00000021958.6	544	4	-9	-1	-9	1	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTTATTTGTCATT	NA	False	NA	14	True	AATACA	-17	NA	55875171	55924642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
Isoform_40632_16	chr13	+	365	3	NNC	ENSMUSG00000021496.13	novel	544	4	NA	NA	-9	-36256	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	178.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCACATTTGTAATTT	NA	False	NA	24	True	ATTAAA	-30	NA	55875171	55888385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_55875288_55880748_55880881_55888268
Isoform_40633_3	chr13	+	487	3	NNC	ENSMUSG00000021496.13	novel	544	4	NA	NA	-128	-36253	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	178.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATTTGTAATTTGCT	NA	False	NA	27	True	ATTAAA	-33	NA	55875052	55888388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_55875288_55880748_55880881_55888268
Isoform_40635_4	chr13	+	1457	8	FSM	ENSMUSG00000021509.6	ENSMUST00000021971.6	3374	8	0	1917	0	-1917	multi-exon	FALSE	canonical	3	15	junction_7	3.84919816723071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	56586167	56620135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56619742
Isoform_40636_18	chr13	+	1823	8	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-6	-2335	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	4.23300925429402	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAATGTGTTTTTGCGT	NA	False	NA	NA	False	AATAAA	-20	NA	56586161	56619717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56618964
Isoform_40638_5	chr13	+	916	4	FSM	ENSMUSG00000035509.18	ENSMUST00000124981.2	3507	4	-33	2624	8	-5	multi-exon	FALSE	canonical	2	8	junction_3	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCAGTTTCTCACTG	NA	False	NA	NA	False	AATAAA	-21	NA	56670292	56675275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_56670436_56671322_56671417_56673454_56673586_56674727
Isoform_40639_81	chr13	+	2715	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	-2	1	0	-1	multi-exon	FALSE	canonical	3	51	junction_1	6.48917367620871	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	9423	False	NA	NA	False	AATAAA	-15	NA	56757396	56787170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
Isoform_40640_18	chr13	+	2757	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	-44	1	19	-1	multi-exon	FALSE	canonical	3	51	junction_1	6.48917367620871	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	9381	False	NA	NA	False	AATAAA	-15	NA	56757354	56787170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
Isoform_40641_12	chr13	+	1334	5	FSM	ENSMUSG00000021540.17	ENSMUST00000138677.8	1398	5	57	7	30	-7	multi-exon	FALSE	canonical	3	51	junction_1	17.4696164811939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGATACAACTAGTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	56850908	56881020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662
Isoform_40644_25	chr13	+	6505	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	80	-1	24	1	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTTGTTTATTTTCT	NA	False	NA	14	True	AATAAA	-18	NA	56850902	56890191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
Isoform_40645_10	chr13	+	6578	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	8	-2	8	2	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTGTTTATTTTCTT	NA	False	NA	15	True	AATAAA	-19	NA	56850830	56890192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
Isoform_40646_3	chr13	+	1506	5	ISM	ENSMUSG00000021540.17	ENSMUST00000109876.8	4570	7	318	6752	-298	-6	5prime_fragment	FALSE	canonical	3	10	junction_1	34.4855042010408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGATACAACTAGTCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	56851182	56881021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_56851390_56871241_56871810_56875216_56875469_56876322_56876443_56880662
Isoform_40647_3	chr13	+	2008	7	FSM	ENSMUSG00000021540.17	ENSMUST00000109876.8	4570	7	345	2217	-271	-1250	multi-exon	FALSE	canonical	3	10	junction_1	28.5856413062378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTGTCCCAACGTTTT	NA	False	NA	NA	False	NA	NA	NA	56851209	56885556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_56851390_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
Isoform_4065_40	chr10	-	3394	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	4	-1544	4	-1	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTGTTGAATACAT	NA	False	NA	-3	True	AATAAA	-14	NA	91007426	90983433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
Isoform_40651_7	chr13	+	3906	3	FSM	ENSMUSG00000050002.15	ENSMUST00000226010.2	1898	3	11	-2019	6	3	multi-exon	FALSE	canonical	3	188	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	5	True	NA	NA	NA	58305473	58311763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_58305551_58307690_58307722_58307965
Isoform_40653_10	chr13	+	752	5	FSM	ENSMUSG00000050002.15	ENSMUST00000051490.15	764	5	15	-3	10	3	multi-exon	FALSE	canonical	3	14	junction_4	87.5928079239386	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	5	True	NA	NA	NA	58305477	58311763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58310651_58310696_58311246
Isoform_40654_79	chr13	+	713	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	5	744	5	3	multi-exon	FALSE	canonical	3	143	junction_3	23.6220236220354	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	5	True	NA	NA	NA	58305472	58311763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
Isoform_40655_14	chr13	+	2618	4	NIC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	176.305290775846	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATATGTGAAAGAATGT	NA	False	NA	15	True	AATAAA	-28	NA	58550069	58557905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_58550332_58552384_58552470_58554815_58554905_58555723
Isoform_40656_18	chr13	+	2534	3	FSM	ENSMUSG00000035367.10	ENSMUST00000225828.2	3594	3	8	1052	-7	0	multi-exon	FALSE	canonical	3	21	junction_1	177.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTGAAAGAATGTT	NA	False	NA	16	True	AATAAA	-29	NA	58550069	58557906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_58550332_58554815_58554905_58555723
Isoform_40658_139	chr13	+	2531	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-83	-1	-83	1	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTGAAAGAATGTTT	NA	False	NA	17	True	AATAAA	-30	NA	58550430	58557907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
Isoform_40659_9	chr13	+	3586	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-81	-1058	-81	2	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCATGGTGTCTC	NA	False	NA	11	True	NA	NA	NA	58550432	58558964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
Isoform_40667_218	chr13	+	2441	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	358	1056	-79	0	multi-exon	FALSE	canonical	3	159	junction_1	108.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTGAAAGAATGTT	NA	False	NA	16	True	AATAAA	-29	NA	58550434	58557906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_58550604_58554815_58554905_58555723
Isoform_4067_34	chr10	-	3218	6	FSM	ENSMUSG00000019961.18	ENSMUST00000105293.11	1842	6	-42	-1334	-12	0	multi-exon	FALSE	canonical	3	37	junction_2	321.134862635622	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007456	90983432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90985621_90987570_90987660_90994609_90994708_90999904_91000064_91001804_91001932_91006899
Isoform_40670_29	chr13	+	3483	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	373	-1	-64	1	multi-exon	FALSE	canonical	3	159	junction_1	108.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTGGTCATGGTGTCT	NA	False	NA	10	True	NA	NA	NA	58550449	58558963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_58550604_58554815_58554905_58555723
Isoform_40671_14	chr13	+	2554	4	NNC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-103	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	169.267703817224	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTGAAAGAATGTTT	NA	False	NA	17	True	AATAAA	-30	NA	58550410	58557907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_58550604_58552381_58552470_58554815_58554905_58555723
Isoform_40672_101	chr13	+	2521	4	NNC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-70	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	169.267703817224	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTGAAAGAATGTTT	NA	False	NA	17	True	AATAAA	-30	NA	58550443	58557907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_58550604_58552381_58552470_58554815_58554905_58555723
Isoform_40678_7	chr13	+	6664	2	FSM	ENSMUSG00000035367.10	ENSMUST00000224479.2	4212	2	-2456	4	-90	0	multi-exon	FALSE	canonical	3	376	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTGAAAGAATGTT	NA	False	NA	16	True	AATAAA	-29	NA	58550423	58557906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_58554905_58555723
Isoform_4068_36	chr10	-	1644	6	FSM	ENSMUSG00000019961.18	ENSMUST00000105293.11	1842	6	-13	211	3	0	multi-exon	FALSE	canonical	3	37	junction_2	321.134862635622	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGATTTATGACTTATT	NA	False	NA	-7	True	ATTAAA	-18	NA	91007427	90984977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90985621_90987570_90987660_90994609_90994708_90999904_91000064_91001804_91001932_91006899
Isoform_40681_27	chr13	+	448	5	ISM	ENSMUSG00000021555.16	ENSMUST00000166923.9	779	10	3	8982	3	45	5prime_fragment	FALSE	canonical	3	670	junction_1	98.3234458305851	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGCCTACCTGATTC	1312	False	NA	NA	False	AATAAA	-21	NA	59733210	59747649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542
Isoform_40692_24	chr13	+	2592	24	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	6	26	combination_of_known_junctions	FALSE	canonical	3	14	junction_14	220.934174049104	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	1315	False	NA	47	True	AATAAA	-9	NA	59733213	59782592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59766044_59766093_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_40694_22	chr13	+	2155	17	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	97	9811	-2	447	5prime_fragment	FALSE	canonical	3	649	junction_6	71.965025142426	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTTTTATTTGCAACT	1307	False	NA	NA	False	AATAAA	-13	NA	59733205	59773925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232
Isoform_40698_1265	chr13	+	2548	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	103	1142	4	28	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1313	False	NA	49	True	AATAAA	-11	NA	59733211	59782594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_40699_279	chr13	+	2650	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	1	1142	1	28	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1211	False	NA	49	True	AATAAA	-11	NA	59733109	59782594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_40700_20	chr13	+	2509	23	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2	28	combination_of_known_junctions	FALSE	canonical	3	6	junction_16	172.648193620236	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1307	False	NA	49	True	AATAAA	-11	NA	59733205	59782594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773277_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_40701_37	chr13	+	2471	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	28	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	170.857036683091	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1306	False	NA	49	True	AATAAA	-11	NA	59733204	59782594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_40716_8	chr13	+	4345	4	FSM	ENSMUSG00000091311.4	ENSMUST00000165133.3	4287	4	-63	5	-63	-5	multi-exon	FALSE	canonical	1	2	junction_3	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACGTTTTCTTGTGCAC	NA	False	NA	NA	False	AGTAAA	-45	NA	59860034	59867104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_59860315_59861449_59861490_59861948_59862010_59863140
Isoform_40719_67	chr13	+	5869	26	FSM	ENSMUSG00000021559.15	ENSMUST00000077453.13	5491	26	7	-385	7	-5	multi-exon	FALSE	canonical	3	41	junction_19	8.36334861165072	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9838	False	NA	NA	False	AATAAA	-16	NA	60749777	60911000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
Isoform_40720_18	chr13	+	5380	27	FSM	ENSMUSG00000021559.15	ENSMUST00000226059.2	5009	27	13	-384	3	-5	multi-exon	FALSE	canonical	3	16	junction_26	11.2282004438423	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9834	False	NA	NA	False	AATAAA	-16	NA	60749773	60911000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909678_60910170
Isoform_40721_4	chr13	+	3773	26	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	1	-1351	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_25	13.3719706849813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTCTGGTGTTCCCTCT	9832	False	NA	NA	False	AATAAA	-14	NA	60749771	60907330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60906880
Isoform_40723_24	chr13	+	3094	4	Fusion	ENSMUSG00000113566.2_ENSMUSG00000074867.5_ENSMUSG00000113626.2	novel	419	3	NA	NA	22	518	multi-exon	FALSE	canonical	3	6	junction_1	57.412735714493	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTGTGGACCAGTC	NA	False	NA	NA	False	NA	NA	NA	61952101	62321751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr13_+_61952220_62254561_62254689_62317567_62317629_62318963
Isoform_40726_32	chr13	+	4722	4	FSM	ENSMUSG00000113836.2	ENSMUST00000220871.2	2707	4	348	-2363	-31	2363	multi-exon	FALSE	canonical	3	77	junction_1	103.747556865478	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTTAATTTTATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	62163766	62201163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62163867_62194994_62195122_62195306_62195368_62196729
Isoform_40727_4	chr13	+	3104	4	FSM	ENSMUSG00000113836.2	ENSMUST00000220871.2	2707	4	298	-695	-81	695	multi-exon	FALSE	canonical	3	77	junction_1	103.747556865478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGCTTGTGTGTGGACC	NA	False	NA	NA	False	NA	NA	NA	62163716	62199495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62163867_62194994_62195122_62195306_62195368_62196729
Isoform_40730_12	chr13	+	4681	3	FSM	ENSMUSG00000113836.2	ENSMUST00000223499.2	687	3	-51	-3943	-51	2363	multi-exon	FALSE	canonical	3	21	junction_2	28	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTTAATTTTATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	62163746	62201163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62163867_62194994_62195122_62196729
Isoform_40735_191	chr13	+	1272	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-359	-5	289	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245556	62260150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
Isoform_40737_53	chr13	+	3175	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-2262	-5	2192	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCTATATTATT	NA	False	NA	NA	False	AATATA	-13	NA	62245556	62262053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
Isoform_4074_386	chr10	-	3766	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	5	1	-5	-1	multi-exon	FALSE	canonical	3	173	junction_1	318.417266421838	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTGTGTGGTCTCCA	NA	False	NA	-19	True	AATAAA	-15	NA	91007435	90996279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
Isoform_40740_75	chr13	+	1945	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-1032	-5	962	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATAAAACTTTGGGTGCA	NA	False	NA	NA	False	ATTAAA	-29	NA	62245556	62260823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
Isoform_40743_16	chr13	+	1196	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222089.2	478	4	-5	-713	-5	289	multi-exon	FALSE	canonical	3	66	junction_3	212.90112467737	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245556	62260150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259238
Isoform_40749_21	chr13	+	1447	4	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-3	285	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	227.404680886056	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTAATGG	NA	False	NA	3	True	NA	NA	NA	62245558	62260146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_62245653_62254561_62254689_62254881_62254943_62258981
Isoform_40754_17	chr13	+	1559	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	1	288	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	230.419590095981	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTAATGGTGT	NA	False	NA	6	True	NA	NA	NA	62245562	62260149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_62245653_62250218_62250513_62254561_62254689_62254881_62254943_62259162
Isoform_40755_158	chr13	+	3069	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	20	-518	3	518	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTGTGGACCAGTC	NA	False	NA	NA	False	NA	NA	NA	62277749	62321751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
Isoform_40756_72	chr13	+	3124	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	-36	-517	-6	517	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62277693	62321750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
Isoform_40760_7	chr13	+	3233	5	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	2	520	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	125.150659207213	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGGACCAGTCGT	NA	False	NA	NA	False	NA	NA	NA	62277748	62321753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_62277843_62289822_62289984_62317255_62317383_62317567_62317629_62318963
Isoform_40765_15	chr13	+	1955	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	-13	-1493	-13	488	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTATGTGTGGACCAG	NA	False	NA	NA	False	NA	NA	NA	62367356	62384446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
Isoform_40766_7	chr13	+	4136	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	-39	-3648	-39	2643	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGATGTTTATTATGT	NA	False	NA	NA	False	ATTAAA	-26	NA	62367330	62386601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
Isoform_40771_113	chr13	+	423	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	31	-2	31	2	multi-exon	FALSE	canonical	3	513	junction_2	20.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGCAGGTATCTGAATT	NA	False	NA	15	True	NA	NA	NA	62411410	62421103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62411510_62420579_62420707_62420906
Isoform_40772_11	chr13	+	2671	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	21	-2240	21	274	multi-exon	FALSE	canonical	3	513	junction_2	20.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGATGGCCCGTTGT	NA	False	NA	10	True	AATAAA	-12	NA	62411400	62423341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_62411510_62420579_62420707_62420906
Isoform_40774_45	chr13	+	1501	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	32	278	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGGCCCGTTGTTTAT	NA	False	NA	14	True	AATAAA	-16	NA	62411411	62423345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
Isoform_40776_6	chr13	+	3247	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	13	2005	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATGATGATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	62411392	62425072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
Isoform_40778_5	chr13	+	3241	17	NIC	ENSMUSG00000021458.18	novel	3249	16	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	49.6578527903694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCTTCTGAATTTG	3708	False	NA	7	True	AATAAA	-21	NA	63112717	63450100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_63112834_63162839_63163778_63180836_63181004_63208848_63209009_63215853_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40779_3	chr13	+	6097	3	Fusion	ENSMUSG00000021458.18_ENSMUSG00000113326.2	novel	424	3	NA	NA	-3	3	intron_retention	FALSE	non_canonical	0	0	junction_2	33.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCCAA	NA	False	NA	NA	False	NA	NA	NA	63387839	63394065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr13_+_63387970_63388070_63391090_63391117
Isoform_40780_7	chr13	+	1365	5	ISM	ENSMUSG00000021458.18	ENSMUST00000220884.2	772	7	-78	1561	1	-1	5prime_fragment	FALSE	canonical	3	67	junction_1	29.0387671914632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGTAATGTTTATT	NA	False	NA	NA	False	ATTAAA	-34	NA	63387843	63447485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
Isoform_40781_43	chr13	+	1054	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	3	-2	0	0	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTGCTTCTGAATT	NA	False	NA	5	True	AATAAA	-19	NA	63387845	63450098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40784_24	chr13	+	1657	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	-10	-592	-10	3	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCACTCTGGCCTTGCTT	NA	False	NA	29	True	AATAAA	-29	NA	63387832	63450688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40785_4	chr13	+	1284	6	NIC	ENSMUSG00000021458.18	novel	918	5	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	57.1398284911672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCAGTTTGCTTCTGAAT	NA	False	NA	4	True	AATAAA	-18	NA	63420613	63450097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_63420920_63421039_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40786_4	chr13	+	1871	6	NIC	ENSMUSG00000021458.18	novel	918	5	NA	NA	-12	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	57.1398284911672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCACTCTGGCCTTGCTT	NA	False	NA	29	True	AATAAA	-29	NA	63420617	63450688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_63420920_63421039_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40787_3	chr13	+	1929	6	NIC	ENSMUSG00000021458.18	novel	918	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	55.3591907455302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACTCTGGCCTTG	NA	False	NA	26	True	AATAAA	-26	NA	63420615	63450685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_63420920_63421039_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40788_3	chr13	+	822	3	NIC	ENSMUSG00000021458.18	novel	688	4	NA	NA	-14	1	intron_retention	FALSE	canonical	2	2	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTAGTTAGTCTCACTG	NA	False	NA	NA	False	AATAAA	-12	NA	63420615	63442983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_63421164_63429955_63430073_63442826
Isoform_40789_5	chr13	+	1165	5	ISM	ENSMUSG00000021458.18	ENSMUST00000220885.2	894	6	541	-243	8	2	3prime_fragment	FALSE	canonical	3	17	junction_1	48.7769156466458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCTTCTGAATTTG	NA	False	NA	7	True	AATAAA	-21	NA	63420855	63450100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40790_3	chr13	+	1407	5	ISM	ENSMUSG00000021458.18	ENSMUST00000220885.2	894	6	298	-242	-17	1	3prime_fragment	FALSE	canonical	3	17	junction_1	48.7769156466458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTTGCTTCTGAATTT	NA	False	NA	6	True	AATAAA	-20	NA	63420612	63450099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40793_3	chr13	+	1905	5	FSM	ENSMUSG00000021458.18	ENSMUST00000223007.2	918	5	-312	-675	-88	0	multi-exon	FALSE	canonical	2	25	junction_1	45.3231453012696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACTCTGGCCTTG	NA	False	NA	26	True	AATAAA	-26	NA	63420759	63450685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40794_4	chr13	+	1810	5	FSM	ENSMUSG00000021458.18	ENSMUST00000223007.2	918	5	-216	-676	8	1	multi-exon	FALSE	canonical	2	25	junction_1	45.3231453012696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGCACTCTGGCCTTGC	NA	False	NA	27	True	AATAAA	-27	NA	63420855	63450686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40795_7	chr13	+	1460	5	FSM	ENSMUSG00000021458.18	ENSMUST00000223007.2	918	5	-454	-88	-12	0	multi-exon	FALSE	canonical	2	25	junction_1	45.3231453012696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTGCTTCTGAATT	NA	False	NA	5	True	AATAAA	-19	NA	63420617	63450098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_40797_41	chr13	+	1941	11	ISM	ENSMUSG00000021470.20	ENSMUST00000067821.13	2743	14	8	15850	8	-5	5prime_fragment	FALSE	canonical	3	89	junction_9	12.0979337078693	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTGGTTGTTTTCTA	NA	False	NA	3	True	AATAAA	-19	NA	63963124	64001619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441
Isoform_40802_128	chr13	+	5581	19	FSM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	-170	-797	2	-2	multi-exon	TRUE	canonical	3	68	junction_14	17.5231768921923	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTTTCATCGAATTTA	NA	False	NA	7	True	AATAAA	-18	NA	63963118	64048114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
Isoform_40805_18	chr13	+	1297	2	FSM	ENSMUSG00000021476.10	ENSMUST00000221264.2	471	2	-367	-459	10	459	multi-exon	FALSE	canonical	3	21	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGGTTTTATTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	64309692	64311891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_64310149_64311050
Isoform_40806_221	chr13	+	2563	8	FSM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	1	0	1	0	multi-exon	FALSE	canonical	3	140	junction_6	9.99183340002612	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCCTTATTCATTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	64309683	64334351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386_64332573_64333086
Isoform_40811_18	chr13	+	4840	7	FSM	ENSMUSG00000021476.10	ENSMUST00000221904.2	4903	7	55	8	10	-8	multi-exon	FALSE	canonical	3	144	junction_5	8.22090830342568	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTATGACTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-11	NA	64309692	64334343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64332573_64333086
Isoform_40813_43	chr13	+	1838	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	228	2052	0	1	multi-exon	FALSE	canonical	3	37	junction_1	3.65892813567591	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	16	True	AATAAA	-16	NA	64580355	64587535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
Isoform_40815_17	chr13	+	2012	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	54	2052	13	1	multi-exon	TRUE	canonical	3	37	junction_1	3.65892813567591	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	16	True	AATAAA	-16	NA	64580181	64587535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
Isoform_40816_4	chr13	+	1828	8	NIC	ENSMUSG00000021483.9	novel	4118	8	NA	NA	-8	1	intron_retention	FALSE	canonical	0	0	junction_5	15.0563567157205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	16	True	AATAAA	-16	NA	64580383	64587535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584661_64585202_64585327_64585690_64585847_64586594
Isoform_40817_8	chr13	+	1783	7	ISM	ENSMUSG00000021483.9	ENSMUST00000222562.2	1107	8	-77	-497	-77	1	intron_retention	FALSE	canonical	3	38	junction_3	3.43592135468138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	16	True	AATAAA	-16	NA	64580716	64587535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
Isoform_40819_6	chr13	+	1895	4	FSM	ENSMUSG00000110393.3	ENSMUST00000209951.2	1597	4	-262	-36	-262	3	multi-exon	FALSE	canonical	3	28	junction_1	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTTTGTTTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	65389304	65397971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789
Isoform_40820_12	chr13	+	9328	8	FSM	ENSMUSG00000021514.19	ENSMUST00000126879.8	2909	8	7	-6426	7	0	multi-exon	FALSE	canonical	3	28	junction_1	11.5564276663752	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGCTGTGATAGCTG	NA	False	NA	26	True	AATAAA	-19	NA	65426634	65452035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
Isoform_40821_3	chr13	+	1538	8	FSM	ENSMUSG00000021514.19	ENSMUST00000130799.8	1580	8	19	23	-19	-22	multi-exon	FALSE	canonical	1	4	junction_7	17.3980998258724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTATTGTGTGGAACT	NA	False	NA	3	True	ACTAAA	-18	NA	65426646	65452012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65451631
Isoform_40823_5	chr13	-	560	3	NNC	ENSMUSG00000113260.2	novel	1038	6	NA	NA	-6190	-5	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_2	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCACTCTGTATAGTCT	1640	False	NA	NA	False	NA	NA	NA	65847000	65840165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_65840489_65840688_65840816_65846890
Isoform_40824_6	chr13	+	441	4	FSM	ENSMUSG00000113760.2	ENSMUST00000221828.2	569	4	-8	136	-8	-136	multi-exon	FALSE	canonical	3	110	junction_1	62.055530687352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTTTCCTCTCACAAT	NA	False	NA	NA	False	NA	NA	NA	66180014	66187925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_66180131_66186206_66186334_66186533_66186595_66187788
Isoform_40825_69	chr13	+	3242	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	-29	-1688	-29	1320	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	66261264	66271970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
Isoform_40829_30	chr13	+	550	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	375591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.6305071980195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTCAGTGTCTATTGTT	NA	False	NA	NA	False	NA	NA	NA	66261264	66646241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66261375_66309197_66309325_66309508_66309570_66645539_66645683_66646132
Isoform_40830_3	chr13	+	3358	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-37	1317	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	98.973165555114	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66261256	66271967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66261375_66264730_66264842_66267450_66267578_66267777_66267839_66269026
Isoform_40831_381	chr13	+	2464	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	570	390	-48	-115	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTAGAATGATGT	8428	False	NA	31	True	ATTAAA	-17	NA	67081463	67146075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
Isoform_40832_72	chr13	+	2706	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	328	390	-58	-115	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTAGAATGATGT	8186	False	NA	31	True	ATTAAA	-17	NA	67081221	67146075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
Isoform_40834_53	chr13	+	3045	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	-13	392	-13	-117	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTTTGTTAGAATGAT	7845	False	NA	29	True	ATTAAA	-15	NA	67080880	67146073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
Isoform_40839_4	chr13	+	4129	4	FSM	ENSMUSG00000057396.8	ENSMUST00000052716.8	3482	4	-34	-613	-33	613	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGTCCTGGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	67276257	67290464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_67276379_67284781_67284909_67285373_67285470_67286679
Isoform_40841_7	chr13	+	1811	4	FSM	ENSMUSG00000058900.6	ENSMUST00000225334.2	397	4	-23	-1391	-6	-841	multi-exon	FALSE	canonical	3	9	junction_1	8.28653526310404	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGCTTCTAGAGTCTTG	NA	False	NA	NA	False	NA	NA	NA	67321239	67331267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_67321373_67324511_67324639_67325128_67325225_67329812
Isoform_40842_8	chr13	+	2745	4	FSM	ENSMUSG00000051037.16	ENSMUST00000120861.8	2712	4	-33	0	-33	0	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGTTTATTATTATTAT	NA	False	NA	14	True	AATAAA	-19	NA	67342536	67357362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_67342659_67346596_67346724_67347212_67347309_67354962
Isoform_40843_24	chr13	+	3244	4	FSM	ENSMUSG00000090659.10	ENSMUST00000164936.10	3258	4	10	4	-1	-4	multi-exon	FALSE	canonical	3	27	junction_3	3.39934634239519	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAATTGATTTTGGTC	NA	False	NA	1	True	NA	NA	NA	67927833	67937193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_67927939_67931908_67932036_67932512_67932609_67934277
Isoform_40844_15	chr13	+	3092	4	Fusion	ENSMUSG00000097906.2_ENSMUSG00000090659.10	novel	3258	4	NA	NA	4	1728	multi-exon	FALSE	canonical	2	7	junction_3	12.7540843131393	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGTTTGTTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	67927815	67961047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr13_+_67927939_67931908_67932036_67932512_67932609_67958301
Isoform_40846_18	chr13	+	2999	4	FSM	ENSMUSG00000030446.18	ENSMUST00000181391.8	2399	4	72	-672	0	672	multi-exon	FALSE	canonical	3	9	junction_1	7.58653778449403	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTACATCAAATTCTGA	NA	False	NA	NA	False	AATAAA	-23	NA	67961930	67975793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_67962016_67970359_67970487_67971218_67971315_67973102
Isoform_40849_62	chr13	+	2283	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	45.0175891550551	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTAATTGTCCGTCTTG	NA	False	NA	NA	False	AATAAA	-16	NA	68730360	68740399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_68730384_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_40850_20	chr13	+	2340	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	45.0175891550551	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTACTCTTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	68730361	68740457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_68730384_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_40851_4	chr13	+	2441	7	FSM	ENSMUSG00000021532.12	ENSMUST00000223319.2	2501	7	2	58	2	0	multi-exon	FALSE	canonical	3	16	junction_4	60.5658502971949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTAATTGTCCGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	68730383	68740397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737341_68737509_68738224_68738340_68740049
Isoform_40852_65	chr13	+	2345	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	17	59	2	0	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68730383	68740398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_40854_7	chr13	+	2410	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	11	0	-4	0	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTACTCTTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	68730377	68740457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_40855_4	chr13	+	4741	6	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	43	junction_1	44.5124701628656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68730383	68740398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_68730470_68731657_68733122_68733296_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_40856_8	chr13	+	2712	7	NIC	ENSMUSG00000021532.12	novel	2501	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	59.418478233253	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTAATTGTCCGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	68730360	68740397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737341_68737509_68738224_68738340_68740049
Isoform_40857_6	chr13	+	2755	7	NIC	ENSMUSG00000021532.12	novel	2501	7	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	59.418478233253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGTGTACTCTTGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	68730376	68740456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737341_68737509_68738224_68738340_68740049
Isoform_40859_71	chr13	+	2600	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	39.5010548382361	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTAATTGTCCGTCTTG	NA	False	NA	NA	False	AATAAA	-16	NA	68730377	68740399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_40861_11	chr13	+	2676	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	39.5010548382361	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTACTCTTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	68730359	68740457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_40866_1191	chr13	+	2824	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	11	-1	11	1	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	1191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	32	True	AATAAA	-20	NA	69760145	69782454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
Isoform_4087_170	chr10	-	3484	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	50	0	-7	0	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTCTGAGCTTGAACC	NA	False	NA	-1	True	AATAAA	-19	NA	92558232	92520607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
Isoform_40896_28	chr13	+	2660	3	FSM	ENSMUSG00000021598.10	ENSMUST00000221893.2	815	3	-40	-1805	-17	0	multi-exon	FALSE	canonical	3	811	junction_1	7	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTCATGTAATTCTTA	-1	True	NA	23	True	AATAAA	-19	NA	69957992	69964219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_69958172_69959725_69959810_69961822
Isoform_40897_566	chr13	+	880	4	FSM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	33	0	-17	0	multi-exon	FALSE	canonical	3	786	junction_3	16.1314048434171	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGTAATTCTTAAAAT	-1	True	NA	27	True	AATAAA	-23	NA	69957992	69964223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_69958172_69959725_69959810_69961822_69961926_69963709
Isoform_40899_7	chr13	+	4213	2	FSM	ENSMUSG00000021598.10	ENSMUST00000221045.2	4197	2	-17	1	-17	-1	multi-exon	FALSE	canonical	3	825	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTTCATGTAATTCTT	-1	True	NA	22	True	AATAAA	-18	NA	69957992	69964218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_69959810_69961822
Isoform_40900_7	chr13	+	2463	3	FSM	ENSMUSG00000021598.10	ENSMUST00000220649.2	451	3	-1742	-270	2	2	multi-exon	FALSE	canonical	3	786	junction_2	19.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATGTAATTCTTAAA	NA	False	NA	25	True	AATAAA	-21	NA	69957961	69964221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_69959810_69961822_69961926_69963709
Isoform_40903_25	chr13	+	2605	5	FSM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	18	2	18	-2	multi-exon	FALSE	canonical	3	12	junction_3	5.35607132140714	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTCATCTTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72776956	72782315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_72777433_72778689_72779096_72779375_72780090_72780704_72780781_72781382
Isoform_40905_3	chr13	+	2351	5	FSM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	-62	336	-62	92	multi-exon	FALSE	canonical	3	12	junction_3	5.35607132140714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGGTGTTTGGGGC	NA	False	NA	NA	False	AATAAA	-16	NA	72776876	72781981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_72777433_72778689_72779096_72779375_72780090_72780704_72780781_72781382
Isoform_40908_367	chr13	+	895	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	28	0	-10	0	multi-exon	FALSE	canonical	3	623	junction_1	0	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGTAGTAGTGTTCT	NA	False	NA	13	True	ATTAAA	-26	NA	73479134	73480297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73479211_73479478
Isoform_40910_17	chr13	+	900	2	FSM	ENSMUSG00000021607.10	ENSMUST00000222030.2	680	2	-13	-207	-13	0	multi-exon	FALSE	canonical	3	30	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGTAGTAGTGTTCT	NA	False	NA	13	True	ATTAAA	-26	NA	73479131	73480297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73479213_73479478
Isoform_40914_1724	chr13	+	3632	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	35	8	1	-8	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	1724	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTACAGGCTCGAGTG	NA	False	NA	15	True	AATAAA	-15	NA	73615350	73664533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
Isoform_4092_9	chr10	-	3253	14	NIC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	47.0005665331586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAGTCTGAGCTTGAAC	NA	False	NA	-2	True	AATAAA	-18	NA	92558232	92520608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
Isoform_4094_4	chr10	-	314	2	ISM	ENSMUSG00000019988.8	ENSMUST00000216086.2	391	4	13	8102	13	-8102	5prime_fragment	FALSE	canonical	3	164	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAACAAAACAAAAAA	NA	False	NA	NA	False	CATAAA	-31	NA	92558253	92555246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_92555492_92558184
Isoform_40941_422	chr13	+	2296	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	43	1	43	-1	multi-exon	FALSE	canonical	3	235	junction_7	20.082544503872	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCTTAACCTCTAA	NA	False	NA	20	True	AATAAA	-15	NA	73752167	73768723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
Isoform_40942_372	chr13	+	2383	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	-44	1	-44	-1	multi-exon	FALSE	canonical	3	235	junction_7	20.082544503872	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCTTAACCTCTAA	NA	False	NA	20	True	AATAAA	-15	NA	73752080	73768723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
Isoform_40943_11	chr13	+	2312	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	63	-35	63	35	multi-exon	FALSE	canonical	3	235	junction_7	20.082544503872	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTGCGGATATCATAC	NA	False	NA	56	True	TATAAA	-8	NA	73752187	73768759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
Isoform_4095_13	chr10	-	2309	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	-3	1906	-3	3	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGTGCACTTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	93147000	93085181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
Isoform_40952_4	chr13	+	2651	2	FSM	ENSMUSG00000021611.10	ENSMUST00000223196.2	2663	2	2	10	2	-10	multi-exon	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGATAAATGAAAAAAAAAA	2125	False	NA	NA	False	NA	NA	NA	73775031	73777784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73775368_73775469
Isoform_40953_67	chr13	+	4316	16	FSM	ENSMUSG00000021611.10	ENSMUST00000022104.9	4313	16	-4	1	1	-1	multi-exon	FALSE	canonical	3	21	junction_2	5.35163526410386	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTGTCATACTAATTC	2124	False	NA	NA	False	AATAAA	-15	NA	73775030	73797961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
Isoform_40954_6	chr13	+	6841	16	FSM	ENSMUSG00000021611.10	ENSMUST00000022104.9	4313	16	-4	-2524	1	2524	multi-exon	FALSE	canonical	3	21	junction_2	5.35163526410386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTTGTTTCTTTTTT	2124	False	NA	NA	False	NA	NA	NA	73775030	73800486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
Isoform_40959_1681	chr13	+	5130	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	11	1	1	-1	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGTGTGCCTCATTTCC	NA	False	NA	103	True	AGTAAA	-28	NA	73911826	73964872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
Isoform_40960_72	chr13	+	5183	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	-42	1	-42	-1	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGTGTGCCTCATTTCC	NA	False	NA	103	True	AGTAAA	-28	NA	73911773	73964872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
Isoform_4097_6	chr10	-	2340	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	-37	1909	-37	0	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCAAAGTGCACTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	93147034	93085184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
Isoform_41011_40	chr13	+	2401	16	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	-3	9	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	34.8873743478768	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGTTTGTATTTATAAAA	NA	False	NA	28	True	TATAAA	-35	NA	74085953	74108945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_41012_26	chr13	+	2491	16	NIC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	32	junction_6	34.8873743478768	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	False	NA	29	True	AATAAA	-26	NA	74085932	74109014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_41014_134	chr13	+	2339	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	-3	71	-3	7	multi-exon	FALSE	canonical	3	92	junction_6	21.3306248280625	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGTTTGTATTTATAA	NA	False	NA	26	True	TATAAA	-33	NA	74085953	74108943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_41015_73	chr13	+	2410	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	-3	0	-3	0	multi-exon	FALSE	canonical	3	92	junction_6	21.3306248280625	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	False	NA	29	True	AATAAA	-26	NA	74085953	74109014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_41017_36	chr13	+	2329	16	FSM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	24	77	-3	0	multi-exon	FALSE	canonical	3	18	junction_6	38.2023850331654	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTACCTGTTTGTA	NA	False	NA	19	True	TATAAA	-26	NA	74085953	74108936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_41019_17	chr13	+	2405	16	FSM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	24	1	-3	-1	multi-exon	FALSE	canonical	3	18	junction_6	38.2023850331654	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACCCCGTCCGCTTTGA	NA	False	NA	27	True	AATAAA	-24	NA	74085953	74109012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_41021_164	chr13	+	3401	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	42	6116	0	-1028	multi-exon	FALSE	canonical	3	416	junction_2	9.5	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGATGATTTGTTTCTCA	4392	False	NA	9	True	AATAAA	-20	NA	74498469	74507786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_74498528_74500974_74501106_74504574
Isoform_4103_849	chr10	-	439	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	55	367	55	-367	multi-exon	FALSE	canonical	3	2132	junction_3	195.841772867792	849	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTGACTTGTGGACTAT	NA	False	NA	-8	True	AATAAA	-21	NA	93425513	93419257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
Isoform_41044_16	chr13	+	2959	19	FSM	ENSMUSG00000021583.8	ENSMUST00000169114.3	5644	19	307	2378	2	-2378	multi-exon	TRUE	canonical	1	4	junction_16	2.26077666104176	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGATATTTTCTTATTT	NA	False	NA	NA	False	ACTAAA	-21	NA	74787993	74838942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_74788013_74794289_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
Isoform_41045_4	chr13	+	2591	14	FSM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	87	2362	-3	-2362	multi-exon	FALSE	canonical	1	7	junction_5	4.93268293596351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGTGTTTAAGAGTAT	NA	False	NA	NA	False	AATGAA	-18	NA	75238031	75280618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160_75278323_75280060
Isoform_41046_5	chr13	+	2348	14	FSM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	329	2363	239	-2363	multi-exon	FALSE	canonical	1	7	junction_5	4.93268293596351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTCAGTGTTTAAGAGTA	NA	False	NA	NA	False	AATGAA	-17	NA	75238273	75280617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160_75278323_75280060
Isoform_41047_3	chr13	+	5001	14	FSM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	27	12	27	-12	multi-exon	FALSE	canonical	1	7	junction_5	4.93268293596351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACCAAAAGTCTTCAT	NA	False	NA	NA	False	AATAAA	-8	NA	75237971	75282968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160_75278323_75280060
Isoform_41052_387	chr13	+	3608	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	767	7	-61	-7	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGTGAATAATTTTG	6219	False	NA	NA	False	AATAAA	-22	NA	75855642	75920476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
Isoform_41065_22	chr13	+	3443	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-61	-8	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	126.162434979672	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAGTGAATAATTTT	6219	False	NA	NA	False	AATAAA	-21	NA	75855642	75920475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_75855917_75873071_75873120_75894410_75894533_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
Isoform_41069_292	chr13	+	1303	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	40	2	-2	-2	multi-exon	FALSE	canonical	3	287	junction_1	16	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTTTGTCCGGTTCT	NA	False	NA	28	True	ATTAAA	-20	NA	75988026	75998268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_75988295_75995288_75995418_75997362
Isoform_41071_3	chr13	+	3487	2	ISM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	57	85165	57	-24778	5prime_fragment	FALSE	canonical	3	143	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAATAC	NA	False	NA	NA	False	ATTAAA	-24	NA	76246909	76250937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_76246949_76247489
Isoform_41073_11	chr13	+	5297	44	FSM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	56	28	56	-28	multi-exon	FALSE	canonical	3	133	junction_18	33.3040145082969	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTGATCATTTGATCC	NA	False	NA	NA	False	AATAAA	-21	NA	76246908	76336074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718
Isoform_41074_17	chr13	+	6916	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	64	-4	64	4	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTACATTTGTGAAACT	NA	False	NA	7	True	ATTAAA	-20	NA	76246916	76338439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_41075_78	chr13	+	6533	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	56	387	56	-177	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCAGTATTTCATTG	NA	False	NA	7	True	ATTAAA	-19	NA	76246908	76338048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_41080_3	chr13	+	5600	44	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	50	-936	combination_of_known_splicesites	FALSE	canonical	2	3	junction_17	43.1454706629054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTAACCTGTTTTTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	76246902	76337289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_41082_3	chr13	+	5271	44	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	37	694	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	42.9939057650817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTATTAGTATGAAACATA	NA	False	NA	25	True	AATAAA	-26	NA	76246889	76336837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_76246949_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_41088_17	chr13	+	1932	5	FSM	ENSMUSG00000033991.10	ENSMUST00000223902.2	2116	5	4	180	4	-180	multi-exon	FALSE	canonical	0	0	junction_1	121.425903332032	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAATACTCAGTATTTCA	NA	False	NA	4	True	ATTAAA	-16	NA	76328547	76338045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_76328636_76330933_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_41091_5	chr13	+	4231	4	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	81695	389	4	-179	3prime_fragment	FALSE	canonical	3	252	junction_3	18.3847763108502	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATACTCAGTATTTCAT	NA	False	NA	5	True	ATTAAA	-17	NA	76328547	76338046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_41094_11	chr13	+	630	3	FSM	ENSMUSG00000071252.7	ENSMUST00000225992.2	616	3	-17	3	-6	-3	multi-exon	FALSE	canonical	3	44	junction_1	11	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCTGAGTGACTTACAC	NA	False	NA	NA	False	AATAAA	-14	NA	77283652	77332120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_77283750_77322971_77323104_77331719
Isoform_41095_4	chr13	+	1177	4	FSM	ENSMUSG00000071252.7	ENSMUST00000225605.2	1539	4	4	358	4	-358	multi-exon	FALSE	canonical	3	23	junction_3	17.5562587763516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCCGCTCATGTATT	NA	False	NA	NA	False	AATAAA	-26	NA	77283676	77341475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672
Isoform_41096_7	chr13	+	4055	20	FSM	ENSMUSG00000071252.7	ENSMUST00000168779.3	5051	20	13	983	-1	-983	multi-exon	FALSE	canonical	1	2	junction_10	16.3230883504439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGCTCAAATTGTTT	NA	False	NA	NA	False	AATAAA	-31	NA	77283671	77760920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672_77341343_77393319_77393482_77402241_77402337_77407959_77408188_77410007_77410274_77411650_77411802_77415780_77415972_77417880_77418064_77429160_77429272_77446585_77446726_77451414_77451580_77464466_77464692_77471483_77471890_77475985_77476143_77480421_77480578_77482387_77482483_77760645
Isoform_41098_10	chr13	+	3994	11	FSM	ENSMUSG00000064138.15	ENSMUST00000163257.9	1436	11	17	-2575	-3	-5	multi-exon	TRUE	canonical	2	7	junction_2	38.9	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGCAACTGTGTCTTC	NA	False	NA	NA	False	AATAAA	-8	NA	77856825	78314349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_77856973_77890881_77891006_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
Isoform_41099_3	chr13	+	1233	9	ISM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	29	159670	0	54461	5prime_fragment	FALSE	canonical	3	89	junction_7	9.17877987534291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAACTGTTTATAATATAT	NA	False	NA	NA	False	ATTAAA	-18	NA	77856837	78154684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506
Isoform_41102_173	chr13	+	3857	10	FSM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	34	1	5	-1	multi-exon	FALSE	canonical	3	89	junction_7	8.92907582349531	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAACTGTGTCTTCTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	77856842	78314353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
Isoform_41104_12	chr13	+	3750	9	NIC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	34.765059686415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAACTGTGTCTTCTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	77856829	78314353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78147704_78147822_78154506_78154592_78311631
Isoform_41105_7	chr13	+	3664	9	FSM	ENSMUSG00000064138.15	ENSMUST00000099358.5	2242	9	30	-1452	5	-2	multi-exon	FALSE	canonical	1	4	junction_4	35.0408244052562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAACTGTGTCTTCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	77856842	78314352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
Isoform_41106_3	chr13	+	3786	9	NIC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	35.8152813056103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAACTGTGTCTTCTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	77856847	78314353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_77856973_77907546_77907649_77909956_77910058_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
Isoform_41110_6	chr13	+	4134	8	FSM	ENSMUSG00000074794.11	ENSMUST00000159690.8	4132	8	2	-4	2	-3	multi-exon	FALSE	canonical	2	5	junction_6	68.2094613103263	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTGGCAGTTTATT	NA	False	NA	27	True	AATAAA	-27	NA	81031530	81044158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039568_81039762_81041488
Isoform_41111_32	chr13	+	4174	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	-75	2	-49	-2	multi-exon	TRUE	canonical	3	173	junction_5	15.8461995701281	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTGGCAGTTTATTT	NA	False	NA	28	True	AATAAA	-28	NA	81031453	81044159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
Isoform_41112_404	chr13	+	4097	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	3	1	3	-1	multi-exon	FALSE	canonical	3	173	junction_5	15.8461995701281	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGGCAGTTTATTTG	NA	False	NA	29	True	AATAAA	-29	NA	81031531	81044160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
Isoform_41117_10	chr13	+	3947	7	NIC	ENSMUSG00000074794.11	novel	4101	8	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	74.3721871550261	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTGGCAGTTTATT	NA	False	NA	27	True	AATAAA	-27	NA	81031531	81044158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_81032049_81035524_81035607_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
Isoform_41121_42	chr13	+	4228	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	19	3	19	-3	multi-exon	FALSE	canonical	3	66	junction_2	12	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAGTTGTTGAATAT	308	False	NA	24	True	AATAAA	-26	NA	81805800	81820987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81806056_81813123_81813389_81817279
Isoform_41127_59	chr13	+	4156	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	91	3	-38	-3	multi-exon	FALSE	canonical	3	66	junction_2	12	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAGTTGTTGAATAT	380	False	NA	24	True	AATAAA	-26	NA	81805872	81820987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81806056_81813123_81813389_81817279
Isoform_41129_7	chr13	+	4100	3	FSM	ENSMUSG00000035840.8	ENSMUST00000049055.8	2338	3	-75	-1687	-38	0	multi-exon	FALSE	canonical	2	14	junction_2	38	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	380	False	NA	27	True	AATAAA	-29	NA	81805872	81820990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81806056_81813123_81813389_81817338
Isoform_41135_3	chr13	+	4101	3	NIC	ENSMUSG00000035840.8	novel	4250	3	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	29.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAATGGAAGTTGTTG	426	False	NA	19	True	AATAAA	-21	NA	81805918	81820982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_81806056_81813127_81813389_81817279
Isoform_41136_14	chr13	+	1415	2	FSM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	-243	2785	-243	144	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81859216	81898609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81860102_81898079
Isoform_41140_8	chr13	+	5307	4	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	187	238	-14	1	intron_retention	FALSE	canonical	3	1314	junction_2	35.311313893551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGTGGTGTATGTTAT	NA	False	NA	22	True	TATAAA	-15	NA	81931382	81945036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074
Isoform_41141_434	chr13	+	810	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	178	238	-23	1	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGTGGTGTATGTTAT	NA	False	NA	22	True	TATAAA	-15	NA	81931373	81945036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
Isoform_41142_79	chr13	+	1046	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	171	9	-30	-9	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAATGACAATAGTC	NA	False	NA	NA	False	AATAAA	-6	NA	81931366	81945265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
Isoform_41143_145	chr13	+	934	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	171	121	-30	118	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTTTGGTAAATTT	NA	False	NA	8	True	AATAAA	-19	NA	81931366	81945153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
Isoform_41147_222	chr13	+	2556	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	29	272	0	-1	multi-exon	FALSE	canonical	0	0	junction_10	57.0470300398157	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTGTAATTTATTTGT	NA	False	NA	20	True	ATTAAA	-21	NA	84370447	84443988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_41149_13	chr13	+	2680	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	2	175	2	96	multi-exon	FALSE	canonical	0	0	junction_10	57.0470300398157	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTGCCTTTTATT	NA	False	NA	117	True	ATTAAA	-15	NA	84370420	84444085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_41151_6	chr13	+	2640	12	FSM	ENSMUSG00000035762.12	ENSMUST00000223827.2	2632	12	-12	4	2	0	multi-exon	TRUE	canonical	0	0	junction_10	68.3415099589633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGAGTGTAATTTATT	NA	False	NA	17	True	ATTAAA	-18	NA	84370420	84443985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_41152_16	chr13	+	2555	12	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	69.776028941722	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTGTAATTTATTTGT	NA	False	NA	20	True	ATTAAA	-21	NA	84370410	84443988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_41153_4	chr13	+	2772	12	NNC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	73.0302778825557	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370428	84443989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430633_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_41154_9	chr13	+	2452	11	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	71.7933840963079	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTGTAATTTATTTGT	NA	False	NA	20	True	ATTAAA	-21	NA	84370447	84443988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_41155_5	chr13	+	2530	11	NIC	ENSMUSG00000035762.12	novel	2632	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	79.1927395662001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGAGTGTAATTTATT	NA	False	NA	17	True	ATTAAA	-18	NA	84370426	84443985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_41156_7	chr13	+	2450	11	FSM	ENSMUSG00000035762.12	ENSMUST00000225069.2	2414	11	-34	-2	-4	2	multi-exon	FALSE	canonical	0	0	junction_9	81.3373223065525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTGTAATTTATTTG	NA	False	NA	19	True	ATTAAA	-20	NA	84370410	84443987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_41157_31	chr13	+	2043	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	3	-1	3	1	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTGTTTTGTTTTGAT	NA	False	NA	9	True	AATAAA	-20	NA	85337529	85361843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_41158_378	chr13	+	1190	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	32	823	5	-5	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATATATTTTCTTTGT	NA	False	NA	5	True	ATTAAA	-12	NA	85337558	85361019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_41162_86	chr13	+	2007	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	38	0	-2	0	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337564	85361842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_41165_15	chr13	+	1112	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	-61	4	8	1	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTCTTTGTGATTGT	NA	False	NA	11	True	ATTAAA	-18	NA	85337534	85361025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_41166_25	chr13	+	1093	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	-38	0	4	0	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	False	NA	15	True	ATTAAA	-22	NA	85337557	85361029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_41167_9	chr13	+	1905	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	-37	-813	5	0	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337558	85361842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_41169_14	chr13	+	1004	9	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	310.456921327259	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATATATTTTCTTTGT	NA	False	NA	5	True	ATTAAA	-12	NA	85337564	85361019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345649_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_41175_155	chr13	+	523	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	611	7555	0	41	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGTGTCAGGACTGC	NA	False	NA	9	True	NA	NA	NA	90237852	90252821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_41176_57	chr13	+	546	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	588	7555	-23	41	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGTGTCAGGACTGC	NA	False	NA	9	True	NA	NA	NA	90237829	90252821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_41184_30	chr13	+	841	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	516	7332	-95	264	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGTACCTCTATTCTT	NA	False	NA	4	True	TTTAAA	-16	NA	90237757	90253044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_41192_105	chr13	+	3700	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	612	4377	1	3219	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCGTCTAGTTTTGAT	NA	False	NA	NA	False	AATAAA	-13	NA	90237853	90255999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_41195_50	chr13	+	3748	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	564	4377	-47	3219	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCGTCTAGTTTTGAT	NA	False	NA	NA	False	AATAAA	-13	NA	90237805	90255999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_41197_10	chr13	+	4885	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	612	3192	1	-3192	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAACTCGTAGATCCA	NA	False	NA	NA	False	NA	NA	NA	90237853	90257184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_41208_5813	chr13	+	504	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	207	226	-52	0	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	5813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATTTTGTGTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	91071283	91072843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
Isoform_41209_1675	chr13	+	534	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	178	225	-81	1	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTTGTGTCTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	91071254	91072844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
Isoform_41217_37	chr3	+	482	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	-8	-49	-8	49	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAT	7656	False	NA	NA	False	AATAAA	-15	NA	37768880	37769362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr3_+_37768900_37769400
Isoform_41223_15	chr13	+	1701	17	FSM	ENSMUSG00000003992.16	ENSMUST00000004094.15	3957	17	71	2185	-6	8	multi-exon	TRUE	canonical	3	38	junction_13	7.3396930283221	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACTGTGTCTGAAGCAA	2792	False	NA	2	True	AATAAA	-22	NA	91609239	91849363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
Isoform_41225_3	chr13	+	1609	16	FSM	ENSMUSG00000003992.16	ENSMUST00000042122.15	1633	16	32	-8	-4	8	multi-exon	FALSE	canonical	3	11	junction_4	12.5973542195706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACTGTGTCTGAAGCAA	2794	False	NA	2	True	AATAAA	-22	NA	91609241	91849363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
Isoform_41227_484	chr13	+	1554	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	421	3372	421	-3372	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTTTCCTCATCTCA	NA	False	NA	11	True	AATAAA	-14	NA	92491654	92522189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
Isoform_41237_42	chr13	+	3768	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	421	1158	421	-1158	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGTGTTATTTTCTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	92491654	92524403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
Isoform_41244_132	chr13	+	5362	12	FSM	ENSMUSG00000021703.10	ENSMUST00000049488.9	5366	12	1	3	1	-3	multi-exon	FALSE	canonical	3	40	junction_8	5.03377025451168	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGTTTTC	NA	False	NA	2	True	AATAAA	-12	NA	92747599	92848452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
Isoform_41246_13	chr13	+	6126	5	FSM	ENSMUSG00000007617.19	ENSMUST00000102752.10	5713	5	-417	4	-24	-4	multi-exon	FALSE	canonical	3	39	junction_1	6.83282518435822	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTCTAGTATATTGA	NA	False	NA	13	True	ATTAAA	-13	NA	93440585	93496966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447
Isoform_41252_11	chr13	+	5015	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-688	-1275	9	-173	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTTGTTCTCTGGA	NA	False	NA	1	True	AATACA	-13	NA	93440618	93541464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
Isoform_41255_20	chr13	+	4987	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1050	-1172	7	-167	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTCTCTGGAGAATGT	NA	False	NA	7	True	AATACA	-19	NA	93440616	93541470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
Isoform_41259_7	chr13	+	5154	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1052	-1337	5	-2	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCTGCCTGGAAAATTA	NA	False	NA	5	True	CATAAA	-15	NA	93440614	93541635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
Isoform_41260_7	chr13	+	2848	16	FSM	ENSMUSG00000042102.8	ENSMUST00000048001.8	2992	16	-39	183	-39	-183	multi-exon	FALSE	canonical	2	5	junction_1	2.8720878971384	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTTATTGCTTTTTA	2435	False	NA	NA	False	AATGAA	-20	NA	93810901	93889158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_93811041_93813542_93813712_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
Isoform_41261_6	chr13	+	3023	16	FSM	ENSMUSG00000042102.8	ENSMUST00000048001.8	2992	16	-46	15	-46	-15	multi-exon	FALSE	canonical	2	5	junction_1	2.8720878971384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGATGCAATGACAGG	2428	False	NA	NA	False	AATAAA	-13	NA	93810894	93889326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_93811041_93813542_93813712_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
Isoform_41262_11	chr13	+	3984	8	FSM	ENSMUSG00000042082.8	ENSMUST00000091403.6	4038	8	48	6	-18	-6	multi-exon	FALSE	canonical	0	0	junction_4	3.27014946921703	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATGTCAGCCTTGGAC	NA	False	NA	NA	False	AATAAA	-15	NA	93908185	94079518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_93908601_93926546_93926734_93930535_93930727_93944003_93944212_93998594_93998839_94016995_94017067_94075734_94075858_94076973
Isoform_41263_117	chr13	+	4454	4	FSM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	-106	0	-106	0	multi-exon	FALSE	canonical	3	77	junction_1	5.35412613473634	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCAAGTTTGTTGGC	2120	False	NA	9	True	ATTAAA	-18	NA	94194197	94331917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_94194415_94257284_94257344_94310530_94311147_94328355
Isoform_41266_3	chr13	+	4642	4	FSM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	-293	-1	-293	1	multi-exon	FALSE	canonical	3	77	junction_1	5.35412613473634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	1933	False	NA	10	True	ATTAAA	-19	NA	94194010	94331918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_94194415_94257284_94257344_94310530_94311147_94328355
Isoform_41267_7	chr13	+	4667	5	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-135	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	37.0843632815773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCAAGTTTGTTGGC	2091	False	NA	9	True	ATTAAA	-18	NA	94194168	94331917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_94194415_94257284_94257344_94271247_94271432_94310530_94311147_94328355
Isoform_41268_8	chr13	+	4529	5	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	37.0843632815773	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	2230	False	NA	10	True	ATTAAA	-19	NA	94194307	94331918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_94194415_94257284_94257344_94271247_94271432_94310530_94311147_94328355
Isoform_41269_5	chr13	+	4444	3	NIC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-155	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	41	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCAAGTTTGTTGGC	2071	False	NA	9	True	ATTAAA	-18	NA	94194148	94331917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_94194415_94310530_94311147_94328355
Isoform_41277_614	chr13	+	4022	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	-2	1	-2	-1	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	614	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94495465	94702824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
Isoform_41297_684	chr13	+	525	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	10	24	10	0	multi-exon	FALSE	canonical	3	1242	junction_3	49.6185449202211	684	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTGTTTGTTTTATA	NA	False	NA	13	True	AATAAA	-13	NA	94925427	94979406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
Isoform_41300_127	chr13	+	3027	13	NIC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	31	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.8981186600383	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTGGGTTTGTTTTT	NA	False	NA	14	True	AATATA	-15	NA	95112886	95159820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
Isoform_41302_8	chr13	+	1767	13	NIC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	1	-1295	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.8981186600383	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTGGGTGCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	95112852	95158526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
Isoform_41303_5	chr13	+	2408	13	NIC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	7	-644	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.8981186600383	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACGTCTACAGATGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	95112862	95159177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
Isoform_41305_4	chr13	+	3057	13	NIC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	23.4716140618123	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTGGGTTTGTTTTT	NA	False	NA	14	True	AATATA	-15	NA	95112852	95159820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_95113098_95114981_95115094_95131757_95131807_95133563_95133694_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
Isoform_41306_9	chr13	+	1952	2	FSM	ENSMUSG00000041995.9	ENSMUST00000221807.2	1945	2	-6	-1	-6	1	multi-exon	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	False	NA	39	True	NA	NA	NA	95460113	95474350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_95460279_95472563
Isoform_41308_54	chr13	+	1964	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	-69	-1	-69	1	multi-exon	FALSE	canonical	3	65	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	False	NA	39	True	NA	NA	NA	95461675	95474350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_95461853_95472563
Isoform_41314_8	chr13	+	2306	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	-411	-1	-411	1	multi-exon	FALSE	canonical	3	65	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	False	NA	39	True	NA	NA	NA	95461333	95474350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_95461853_95472563
Isoform_41316_225	chr13	+	2284	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	31	2868	31	-2317	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGCCTGCCAGTGATT	NA	False	NA	NA	False	ATTAAA	-29	NA	96524832	96551377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
Isoform_41318_71	chr13	+	2988	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	31	2164	31	-1613	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGATGTAAGTAGAATA	NA	False	NA	7	True	AATAAA	-19	NA	96524832	96552081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
Isoform_4132_2511	chr10	-	1966	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	21	2437	-9	2	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	2511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATACATTTTAATGTGTA	NA	False	NA	-14	True	AATAAA	-18	NA	93725655	93696787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
Isoform_41322_30	chr13	+	4626	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	31	526	31	25	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTGTATGTCTGGTTT	NA	False	NA	NA	False	ATTAAA	-41	NA	96524832	96553719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
Isoform_41324_14	chr13	+	3199	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	8	-461	-3	-4	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAATCAGACTGTTTGA	NA	False	NA	NA	False	AATATA	-16	NA	96679250	96774519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_41325_13	chr13	+	4083	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	13	-1350	2	885	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTATTTTATTTTGCA	NA	False	NA	11	True	AAAAAG	-17	NA	96679255	96775408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_41326_14	chr13	+	2509	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	12	225	1	-225	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGCTATATTTTTATT	NA	False	NA	6	True	TATAAA	-19	NA	96679254	96773833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_41327_16	chr13	+	4025	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	-8	1268	-8	884	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTATTTTATTTTGC	NA	False	NA	10	True	AAAAAG	-16	NA	96679234	96775407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_41328_18	chr13	+	3135	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	12	2138	1	14	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGACATTTGATTTAA	NA	False	NA	NA	False	AATATA	-34	NA	96679254	96774537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_41330_3	chr13	+	2499	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	-56	2842	-56	-225	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGCTATATTTTTATT	NA	False	NA	6	True	TATAAA	-19	NA	96679186	96773833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_41334_3	chr13	+	5274	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	1	10	1	-10	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTCACTTGCTTGAT	NA	False	NA	NA	False	ATTAAA	-39	NA	96679243	96776665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_41335_3	chr13	+	5847	26	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	39	-246	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	4.02988833592198	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGCTTTTATTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	96884818	97046301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96932246_96932808_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
Isoform_41336_6	chr13	+	5286	25	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	40	-245	combination_of_known_splicesites	FALSE	canonical	2	5	junction_13	3.76017139089283	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGCTTTTATTGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	96884819	97046302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
Isoform_41337_4	chr13	+	5292	25	NNC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	40	-242	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	3.8888640872225	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTATTGTCATAA	NA	False	NA	NA	False	AATAAA	-20	NA	96884819	97046305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045988
Isoform_41338_31	chr13	+	5071	3	FSM	ENSMUSG00000091387.3	ENSMUST00000171324.3	5087	3	23	-7	23	7	multi-exon	FALSE	canonical	3	6	junction_1	3	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGGACTTGTGAGCT	NA	False	NA	NA	False	AATAAA	-19	NA	97061219	97087421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97061457_97072387_97072505_97082704
Isoform_41340_8	chr13	+	1832	12	ISM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-51	6369	-51	-6369	5prime_fragment	FALSE	canonical	3	256	junction_9	16.9856526720116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTGAGTACTTGATG	8666	False	NA	NA	False	AATAAA	-18	NA	97208099	97259654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199
Isoform_41342_208	chr13	+	4611	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-64	0	-64	0	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8653	False	NA	14	True	AATAAA	-20	NA	97208086	97266023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_41344_54	chr13	+	4913	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-366	0	-366	0	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8351	False	NA	14	True	AATAAA	-20	NA	97207784	97266023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_41345_31	chr13	+	5395	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-64	-784	-64	-714	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTGTTTTAAATTTC	8653	False	NA	NA	False	ATTAAA	-24	NA	97208086	97266807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_41349_25	chr13	+	5547	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-72	-928	-72	-570	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATATGGTGATTACAGAT	8645	False	NA	NA	False	AATAAA	-10	NA	97208078	97266951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_4135_257	chr10	-	4403	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	21	0	-9	0	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725655	93694350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
Isoform_41353_13	chr13	+	5845	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-366	-932	-366	-566	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGATTACAGATTAAT	8351	False	NA	NA	False	AATAAA	-14	NA	97207784	97266955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_41356_6	chr13	+	4516	12	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-63	6	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	80.1011756911685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTCTGTGTGTTCAC	8654	False	NA	20	True	AATAAA	-26	NA	97208087	97266029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_97208220_97228325_97228461_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_41358_7	chr13	+	4247	10	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-57	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	88.1173460033078	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCAGTCTTCTCTGTGTG	8660	False	NA	15	True	AATAAA	-21	NA	97208093	97266024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_97208220_97228325_97228461_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_41366_113	chr13	+	3115	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	43.0145033680502	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGCCTAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	97274485	97312950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
Isoform_41368_7	chr13	+	3034	20	FSM	ENSMUSG00000021666.17	ENSMUST00000042084.13	3074	20	41	-1	0	1	multi-exon	FALSE	canonical	2	7	junction_10	59.2215428348002	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGCCTAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	97274485	97312950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
Isoform_41369_255	chr13	+	3122	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	26	9	2	1	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGCCTAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	97274511	97312950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
Isoform_41372_13	chr13	+	3065	20	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	51.7295331347379	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGCCTAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	97274487	97312950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
Isoform_41374_7	chr13	+	3473	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	51.2320944330797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGCCTAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	97274501	97312950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_97274909_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
Isoform_41378_9	chr13	+	4737	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTATTGTGAGTT	NA	False	NA	22	True	AATAAA	-16	NA	97377612	97389542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97378038_97381478_97383293_97387044
Isoform_41379_21	chr13	+	2471	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	0	2266	0	-2266	multi-exon	FALSE	canonical	3	5	junction_1	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTTGTCTGGTAATTG	NA	False	NA	NA	False	AATATA	-42	NA	97377612	97387276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97378038_97381478_97383293_97387044
Isoform_41380_12	chr13	+	2862	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	0	1875	0	-1875	multi-exon	FALSE	canonical	3	5	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAATGTGTTCTAGAT	NA	False	NA	NA	False	TTTAAA	-15	NA	97377612	97387667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97378038_97381478_97383293_97387044
Isoform_41384_3	chr13	+	4180	2	ISM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	52	9904	52	-2597	5prime_fragment	FALSE	canonical	3	195	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGACATTTTGTATTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	97619260	97623611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_97619286_97619456
Isoform_41385_16	chr13	+	2773	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	0	-9	0	9	multi-exon	FALSE	canonical	3	54	junction_2	70.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGACCTCTTCCTATAC	NA	False	NA	30	True	AATAAA	-27	NA	97619208	97633524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97619286_97619456_97619541_97630912
Isoform_41387_3	chr13	+	3394	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	1	-631	1	631	multi-exon	FALSE	canonical	3	54	junction_2	70.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGATAATTCTGAA	NA	False	NA	17	True	AATACA	-16	NA	97619209	97634146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_97619286_97619456_97619541_97630912
Isoform_41388_7	chr13	+	3474	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	1	631	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGATAATTCTGAA	NA	False	NA	17	True	AATACA	-16	NA	97619209	97634146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
Isoform_41389_45	chr13	+	2792	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	-1	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGCGAACTCAAGACCT	NA	False	NA	20	True	AATAAA	-17	NA	97619259	97633514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
Isoform_41392_4	chr13	+	2315	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	1	-364	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCAATGTCCTTTCT	NA	False	NA	8	True	NA	NA	NA	97619209	97633151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_97619286_97630912
Isoform_41393_18	chr13	+	2634	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	5	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACTCAAGACCTCTTCCT	NA	False	NA	26	True	AATAAA	-23	NA	97619259	97633520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_97619286_97630912
Isoform_41394_5	chr13	+	3260	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	630	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACTGTGATAATTCTGA	NA	False	NA	16	True	AATACA	-15	NA	97619258	97634145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_97619286_97630912
Isoform_41397_25	chr13	+	2394	8	FSM	ENSMUSG00000021661.17	ENSMUST00000123924.8	2328	8	-66	0	-11	0	multi-exon	FALSE	canonical	3	142	junction_1	24.7839645327212	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	14	True	AATAAA	-24	NA	98399635	98410426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
Isoform_41400_108	chr13	+	1848	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	-94	1	-9	-1	multi-exon	FALSE	canonical	3	142	junction_1	23.3559414282533	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGATTATATGCTTGT	NA	False	NA	13	True	AATAAA	-23	NA	98399655	98410425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
Isoform_41401_3	chr13	+	1559	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	-129	325	-26	-325	multi-exon	TRUE	canonical	3	142	junction_1	23.3559414282533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCACTTGTTTATAATAAA	NA	False	NA	NA	False	AATAAA	-15	NA	98399620	98410101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
Isoform_41405_8	chr13	+	2417	8	NNC	ENSMUSG00000021661.17	novel	2328	8	NA	NA	-26	-5	intron_retention	FALSE	canonical	2	11	junction_2	66.7477737915089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCTCTGATTATATGC	NA	False	NA	9	True	AATAAA	-19	NA	98399620	98410421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_98399985_98402658_98403054_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
Isoform_41406_11	chr13	+	1891	9	NNC	ENSMUSG00000021661.17	novel	1755	9	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	62.5658403204177	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCTCTGATTATATGC	NA	False	NA	9	True	AATAAA	-19	NA	98399621	98410421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_98399985_98402658_98403054_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
Isoform_41407_4	chr13	+	1977	7	FSM	ENSMUSG00000021661.17	ENSMUST00000091356.11	1949	7	-34	6	0	-6	multi-exon	FALSE	canonical	3	36	junction_1	62.0510542483634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98399664	98410420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_98399985_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
Isoform_41408_17	chr13	+	1461	8	FSM	ENSMUSG00000021661.17	ENSMUST00000226100.2	1476	8	9	6	-9	-6	multi-exon	FALSE	canonical	3	36	junction_1	57.4651624722247	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98399655	98410420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_98399985_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
Isoform_41410_10	chr13	+	1724	2	FSM	ENSMUSG00000097848.3	ENSMUST00000181742.2	1723	2	0	-1	0	1	multi-exon	FALSE	canonical	3	15	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACGACTGGTCTTTAGCT	6940	False	NA	NA	False	NA	NA	NA	99237213	99244089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_99237334_99242485
Isoform_41411_38	chr13	+	1962	12	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_6	174.354630538115	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481303	99552070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99537777_99537901_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
Isoform_41413_826	chr13	+	1841	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	8	0	6	0	multi-exon	FALSE	canonical	3	414	junction_10	37.2860563750043	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481301	99552070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
Isoform_41417_29	chr13	+	1710	9	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	145.098027209194	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTGTGTGGTGTGATT	NA	False	NA	19	True	AATAAA	-14	NA	99481301	99552069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_99481384_99484839_99484918_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
Isoform_41420_21	chr13	+	534	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	61	6	-12	1	multi-exon	FALSE	canonical	3	69	junction_1	3	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTATTGGTGAATATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	100244580	100250740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_100244738_100245530_100245640_100250472
Isoform_41423_774	chr13	+	1213	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	10	-1	4	1	multi-exon	TRUE	canonical	3	544	junction_6	97.8154352594722	774	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGACTTTATAGATAT	NA	False	NA	18	True	AATAAA	-14	NA	100261369	100274199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
Isoform_41429_765	chr13	+	1204	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	19	-1	0	1	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	100787869	100792568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_100787954_100790698_100790792_100791541
Isoform_41431_53	chr13	+	1737	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	19	-534	0	534	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTTCT	NA	False	NA	NA	False	NA	NA	NA	100787869	100793101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_100787954_100790698_100790792_100791541
Isoform_41432_378	chr13	+	921	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	383	-6	0	6	multi-exon	FALSE	canonical	3	650	junction_4	426.823734110464	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTTAATAGTAGGTGAT	NA	False	NA	-41	True	AATAAA	-20	NA	100787869	100802873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
Isoform_41433_95	chr13	+	959	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	383	-44	0	44	multi-exon	FALSE	canonical	3	650	junction_4	426.823734110464	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAAGATACATGGTCA	NA	False	NA	-3	True	GATAAA	-7	NA	100787869	100802911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
Isoform_41435_88	chr13	+	1231	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	0	-1	0	0	multi-exon	FALSE	canonical	3	171	junction_1	554	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	100788114	100792568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_100788226_100790698_100790792_100791541
Isoform_41440_31	chr13	+	1282	3	FSM	ENSMUSG00000052293.15	ENSMUST00000185767.7	778	3	41	-545	0	0	multi-exon	FALSE	canonical	3	39	junction_1	620	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	100788132	100792568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_100788295_100790698_100790792_100791541
Isoform_41449_152	chr13	+	3785	11	FSM	ENSMUSG00000042743.14	ENSMUST00000044385.14	3048	11	17	-754	-15	754	multi-exon	FALSE	canonical	3	36	junction_7	16.2775919595006	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGATTTTGTCTTTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	104246265	104278997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
Isoform_41451_14	chr13	+	3775	11	NNC	ENSMUSG00000042743.14	novel	3048	11	NA	NA	-14	757	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	23.9893726470702	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTTGTCTTTGACTTA	NA	False	NA	NA	False	AATAAA	-21	NA	104246266	104279000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268572_104268673_104268737_104271111_104271150_104271347_104271432_104276247
Isoform_41454_3	chr13	+	3763	11	NIC	ENSMUSG00000042743.14	novel	3048	11	NA	NA	-25	754	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	23.8086118872983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGATTTTGTCTTTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	104246311	104278997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_104246502_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
Isoform_41455_28	chr13	+	3783	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	44	-411	2	56	multi-exon	FALSE	canonical	3	141	junction_1	34.1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAACAATTTAAGTCATT	NA	False	NA	58	True	AATAAA	-22	NA	104315348	104339936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_41456_26	chr13	+	3238	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	11	167	11	-167	multi-exon	FALSE	canonical	3	141	junction_1	34.1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGACTTTGAATTGT	NA	False	NA	3	True	AATAAA	-14	NA	104315315	104339358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_41458_20	chr13	+	3774	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	0	-358	0	3	multi-exon	FALSE	canonical	3	141	junction_1	34.1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTTGTTATTCTAAAAA	NA	False	NA	5	True	AATAAA	-15	NA	104315304	104339883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_41459_63	chr13	+	3371	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	44	1	2	-1	multi-exon	FALSE	canonical	3	141	junction_1	34.1	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTGACTGTGACGTAT	NA	False	NA	10	True	AATATA	-24	NA	104315348	104339524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_41460_22	chr13	+	4163	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	44	-791	2	436	multi-exon	FALSE	canonical	3	141	junction_1	34.1	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	104315348	104340316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_41461_62	chr13	+	3730	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	44	-358	2	3	multi-exon	FALSE	canonical	3	141	junction_1	34.1	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTTGTTATTCTAAAAA	NA	False	NA	5	True	AATAAA	-15	NA	104315348	104339883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_41462_15	chr13	+	3826	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	-6	-404	-6	49	multi-exon	FALSE	canonical	3	141	junction_1	34.1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGCTAGTTAACAATTTA	NA	False	NA	51	True	AATAAA	-15	NA	104315298	104339929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_41464_10	chr13	+	4196	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	11	-791	11	436	multi-exon	FALSE	canonical	3	141	junction_1	34.1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	104315315	104340316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_41468_168	chr13	+	987	10	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	409	junction_5	30.3205101100449	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGGGCATAGTTTGTC	NA	False	NA	4	True	AATAAA	-15	NA	104365465	104386119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
Isoform_41469_31	chr13	+	1004	10	FSM	ENSMUSG00000021714.16	ENSMUST00000224500.2	1353	10	347	2	3	-2	multi-exon	FALSE	canonical	3	57	junction_4	127.2119840616	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCATAGTTTGTCTTTG	NA	False	NA	8	True	AATAAA	-19	NA	104365465	104386123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370741_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
Isoform_41477_40	chr13	+	1702	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	60	603	-2	2	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTCTCTGAGGTTT	NA	False	NA	19	True	TATAAA	-29	NA	104953744	104975179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
Isoform_41479_24	chr13	+	2370	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	16	-21	16	21	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACGTTTTTAAAAAAAAT	NA	False	NA	NA	False	AATAAA	-39	NA	104953700	104975803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
Isoform_41483_55	chr13	+	1971	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-14	94	-10	-94	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTAAACTAGCTTCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	107083652	107096174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
Isoform_41484_449	chr13	+	1234	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-24	841	8	-841	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAGTGTTTTATATAT	NA	False	NA	14	True	NA	NA	NA	107083642	107095427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
Isoform_41488_32	chr13	+	1258	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-47	840	-15	-840	multi-exon	TRUE	canonical	3	504	junction_4	50.5395680025492	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083619	107095428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
Isoform_41490_20	chr13	+	2512	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-2	-459	2	-5	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATGAGCAAGTTTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	107083664	107096727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
Isoform_41495_21	chr13	+	1310	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	8	-840	intron_retention	FALSE	canonical	3	551	junction_5	39.2372272210971	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083642	107095428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
Isoform_41501_187	chr13	+	1924	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	-8	2	-8	-2	multi-exon	FALSE	canonical	3	97	junction_1	47	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTCCTGAGTTTTTGT	NA	False	NA	NA	False	AATAAA	-42	NA	108180971	108185704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108181021_108182958_108183103_108183973
Isoform_41502_19	chr13	+	2019	3	FSM	ENSMUSG00000071180.6	ENSMUST00000226042.2	1092	3	4	-931	1	-2	multi-exon	FALSE	canonical	3	16	junction_1	87.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTCCTGAGTTTTTGT	NA	False	NA	NA	False	AATAAA	-42	NA	108181023	108185704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108181168_108182958_108183103_108183973
Isoform_41503_51	chr13	+	2094	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	0	3	0	-3	multi-exon	FALSE	canonical	3	27	junction_1	82	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGGTCCTGAGTTTTTG	NA	False	NA	NA	False	AATAAA	-41	NA	108181022	108185703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108181243_108182958_108183103_108183973
Isoform_41508_3	chr13	+	1742	13	NIC	ENSMUSG00000021694.19	novel	2111	12	NA	NA	2	-461	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	29.7918706286724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGTCTCCTTGAGCGC	NA	False	NA	15	True	AATATA	-24	NA	108295273	108331050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108312338_108312441_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
Isoform_41509_24	chr13	+	2104	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	4	3	4	-3	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTTCTTTCCTTTCCT	NA	False	NA	4	True	ATTAAA	-15	NA	108295275	108331516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
Isoform_41510_35	chr13	+	1636	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	2	473	2	-465	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAACTTGTCTCCTTGA	NA	False	NA	11	True	AATATA	-20	NA	108295273	108331046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
Isoform_41511_5	chr13	+	1640	12	FSM	ENSMUSG00000021694.19	ENSMUST00000152634.8	2095	12	-14	469	2	-461	multi-exon	FALSE	canonical	0	0	junction_7	31.8161038282489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGTCTCCTTGAGCGC	NA	False	NA	15	True	AATATA	-24	NA	108295273	108331050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108312338_108312441_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
Isoform_41512_14	chr13	+	1537	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	10	848	3	-461	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGTCTCCTTGAGCGC	NA	False	NA	15	True	AATATA	-24	NA	108295274	108331050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
Isoform_41513_5	chr13	+	2006	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	-2	391	-2	-4	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCATACAATTGTTCTT	NA	False	NA	-5	True	ATTAAA	-6	NA	108295262	108331507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
Isoform_41514_3	chr13	+	3974	8	FSM	ENSMUSG00000021696.10	ENSMUST00000225550.2	2351	8	-13	-1610	-7	0	multi-exon	FALSE	canonical	3	9	junction_3	34.299997025049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTCATGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	108350930	108422217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108351035_108393200_108393333_108403723_108403869_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_41516_31	chr13	+	2042	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	25	1946	19	-336	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATAAAGACACTGAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	108350962	108420271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_4152_30	chr10	-	2939	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-50	1590	3	-1590	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCGATGTGTGCTGGGG	3414	False	NA	-4	True	AATAAA	-15	NA	93871660	93805551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
Isoform_41520_3	chr13	+	1884	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-74	2203	-74	-593	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGAAAGGTATAATCTG	NA	False	NA	21	True	AATAAA	-28	NA	108350863	108420014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_41521_26	chr13	+	3396	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-7	624	-7	-624	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACATGTGTGTGTGTGT	NA	False	NA	13	True	AATAAA	-14	NA	108350930	108421593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_41522_25	chr13	+	4013	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-7	7	-7	-7	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAATTTTGTCATG	NA	False	NA	NA	False	NA	NA	NA	108350930	108422210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_41525_3	chr13	+	4068	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-62	7	-62	-7	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAATTTTGTCATG	NA	False	NA	NA	False	NA	NA	NA	108350875	108422210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_41526_6	chr13	+	5201	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	21	-1209	15	1209	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTGAAAGAAGGCTTGG	NA	False	NA	NA	False	AATAAA	-25	NA	108350958	108423426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_41527_3	chr13	+	3483	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-93	623	-93	-623	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACATGTGTGTGTGTGTG	NA	False	NA	14	True	AATAAA	-15	NA	108350844	108421594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_41529_3	chr13	+	4190	2	FSM	ENSMUSG00000021697.13	ENSMUST00000168037.2	674	2	-15	-3501	-15	3501	multi-exon	FALSE	canonical	3	120	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACAAAACAA	2868	False	NA	NA	False	NA	NA	NA	108452886	108464512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108453004_108460439
Isoform_4153_23	chr10	-	2953	12	FSM	ENSMUSG00000036099.17	ENSMUST00000119818.8	11138	12	18	8167	2	-1589	multi-exon	FALSE	canonical	3	20	junction_7	12.5467719993354	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCGATGTGTGCTGGGGT	3413	False	NA	-3	True	AATAAA	-16	NA	93871661	93805550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
Isoform_41532_150	chr13	+	2529	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	17	17	17	-17	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATATACTATGC	2864	False	NA	22	True	AATAAA	-29	NA	108452882	108526102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
Isoform_41533_5	chr13	+	2224	10	NIC	ENSMUSG00000021697.13	novel	2563	11	NA	NA	1	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.9670038468367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	2896	False	NA	15	True	AATAAA	-22	NA	108452914	108526095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_108453004_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
Isoform_41534_7	chr13	+	3021	15	FSM	ENSMUSG00000021699.18	ENSMUST00000135275.8	2123	15	-218	-680	-218	570	multi-exon	TRUE	canonical	1	3	junction_1	7.84544583871199	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACCACTGGTTTTTGTT	NA	False	NA	NA	False	TTTAAA	-30	NA	109769095	110088578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
Isoform_41536_8	chr13	+	3377	15	FSM	ENSMUSG00000021699.18	ENSMUST00000074103.12	2167	15	-644	-566	-644	566	multi-exon	FALSE	canonical	2	10	junction_1	6.47640931002824	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATCTACCACTGGTTTT	NA	False	NA	NA	False	TTTAAA	-26	NA	109822045	110088574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_109822755_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
Isoform_41541_3	chr13	+	3122	11	FSM	ENSMUSG00000021699.18	ENSMUST00000119672.8	2051	11	-414	-657	-414	570	multi-exon	FALSE	canonical	3	11	junction_1	6.78896162899747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACCACTGGTTTTTGTT	NA	False	NA	NA	False	TTTAAA	-30	NA	110039221	110088578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_110040025_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
Isoform_41542_5	chr13	+	2633	10	FSM	ENSMUSG00000021699.18	ENSMUST00000120664.8	4207	10	159	1415	159	572	multi-exon	FALSE	canonical	3	22	junction_7	3.99382239013587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCACTGGTTTTTGTTTT	NA	False	NA	NA	False	TTTAAA	-32	NA	110039798	110088580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
Isoform_41544_218	chr13	+	2795	14	FSM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	3	2	1	-2	multi-exon	FALSE	canonical	3	65	junction_2	11.0769230769231	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTGGTCTCCTGTCCTT	NA	False	NA	4	True	AATAAA	-15	NA	110531582	110537376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
Isoform_41545_5	chr13	+	1265	3	ISM	ENSMUSG00000086649.2	ENSMUST00000156236.2	621	4	26	1518	26	477	5prime_fragment	FALSE	canonical	3	32	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGTATGAGTTTTTC	887	False	NA	NA	False	NA	NA	NA	111716820	111779846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_111716936_111717450_111717511_111778756
Isoform_41546_7	chr13	+	643	4	FSM	ENSMUSG00000086649.2	ENSMUST00000156236.2	621	4	-10	-12	-10	12	multi-exon	FALSE	canonical	3	14	junction_3	8.73053390247253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTTGTGTACAGATTT	851	False	NA	9	True	NA	NA	NA	111716784	111781376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_111716936_111717450_111717511_111778756_111779023_111781210
Isoform_41547_4	chr13	+	5192	13	NIC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.9757852743231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTCGTGTGACT	NA	False	NA	7	True	AATAAA	-15	NA	111822779	111855128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_111822872_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
Isoform_4155_3	chr10	-	2660	10	NIC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	-1	-1587	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	17.3717522943938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTGCTGGGGTTT	3410	False	NA	-1	True	AATAAA	-18	NA	93871664	93805548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
Isoform_41551_92	chr13	+	5130	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	148	1	0	-1	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGGTCGTGTGACTA	NA	False	NA	8	True	AATAAA	-16	NA	111822859	111855129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
Isoform_41553_9	chr13	+	2626	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	83	2570	13	-1610	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGTTTGTTCCGAGGC	NA	False	NA	NA	False	ATTAAA	-20	NA	111822794	111852560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
Isoform_4156_30	chr10	-	3882	3	FSM	ENSMUSG00000097164.3	ENSMUST00000181906.3	6566	3	1	2683	1	-2683	multi-exon	FALSE	canonical	3	9	junction_2	6	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACATATCTCCATTTCTA	NA	False	NA	-7	True	AATAAA	-21	NA	94524437	94509569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_94512992_94514192_94514310_94524094
Isoform_41567_12	chr13	+	2822	5	ISM	ENSMUSG00000021756.13	ENSMUST00000184276.8	3009	18	-149	20931	11	-2	5prime_fragment	FALSE	canonical	3	401	junction_2	8.38152730712011	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCGTTCCAATATTATT	NA	False	NA	NA	False	AATAAA	-17	NA	112600625	112620148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957
Isoform_4157_4	chr10	-	3835	3	NNC	ENSMUSG00000097164.3	novel	6566	3	NA	NA	0	-2689	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	9	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACCACATATCTCCA	NA	False	NA	-13	True	AATAAA	-15	NA	94524438	94509575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_94512992_94514192_94514310_94524136
Isoform_41571_425	chr13	+	5399	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	42	3237	0	-11	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCGTGTGTAAAAATG	NA	False	NA	24	True	AATAAA	-25	NA	112600645	112643383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
Isoform_41576_60	chr13	+	7891	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	47	740	5	-740	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTCTTTTCTGTCT	NA	False	NA	12	True	AATAAA	-12	NA	112600650	112645880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
Isoform_41577_18	chr13	+	7911	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	23	744	12	-744	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGCTGCTGTCTTTTCT	NA	False	NA	8	True	AATAAA	-8	NA	112600626	112645876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
Isoform_4158_3	chr10	-	6127	31	FSM	ENSMUSG00000074785.6	ENSMUST00000099337.5	7302	31	-179	1354	-179	-1354	multi-exon	TRUE	canonical	0	0	junction_5	2.01218510303821	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTTCACATTGGAGTA	NA	False	NA	3	True	AATAAA	-25	NA	94780876	94628081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845_94634010_94635132_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032_94663180_94667204_94667404_94669149_94669275_94669509_94669549_94673363_94673468_94673779_94673882_94677326_94677430_94679584_94679771_94680043_94680248_94683376_94683477_94685683_94685864_94688450_94688591_94700578_94700675_94700792_94700896_94702772_94702861_94706836_94706982_94718379_94718495_94742326_94742428_94746397_94746533_94758491_94758633_94779378
Isoform_41580_18	chr13	+	2259	6	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	18	498	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	158.377523657873	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCTTCTGCATAGCTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	112600663	112620648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112619103
Isoform_41581_19	chr13	+	1756	6	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	158.377523657873	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCGTTCCAATATTATT	NA	False	NA	NA	False	AATAAA	-17	NA	112600666	112620148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112619103
Isoform_41590_20	chr13	+	2261	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	1	6648	1	-6642	multi-exon	TRUE	canonical	3	26	junction_2	7.31122983038101	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTTCCATGGCATC	NA	False	NA	13	True	AGTAAA	-19	NA	112797300	112868635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
Isoform_41591_7	chr13	+	5218	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	1	3691	1	-3685	multi-exon	FALSE	canonical	3	26	junction_2	7.31122983038101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGCAAGAGTCTACTTT	NA	False	NA	NA	False	NA	NA	NA	112797300	112871592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
Isoform_41597_291	chr13	+	1559	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	29	10	29	-10	multi-exon	FALSE	canonical	3	199	junction_2	66.7730484551964	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGAAGCGTTTGTAG	9666	False	NA	4	True	AATAAA	-19	NA	112937354	113004418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
Isoform_4160_3	chr10	-	1230	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-116	1	6	-1	multi-exon	FALSE	canonical	3	30	junction_2	28	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCCTCTTTCAATGAGA	NA	False	NA	1	True	AATAAA	-21	NA	95159543	95011127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95011841_95158447_95158752_95159330
Isoform_41602_94	chr13	+	1404	5	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	29	-10	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	115.720298565118	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGAAGCGTTTGTAG	9666	False	NA	4	True	AATAAA	-19	NA	112937354	113004418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_112937801_112993279_112993561_112996177_112996236_113003329_113003507_113003976
Isoform_41606_33	chr13	+	1057	3	FSM	ENSMUSG00000042426.7	ENSMUST00000223866.2	1736	3	34	645	34	-645	multi-exon	FALSE	canonical	3	291	junction_2	16	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATAGAAAAATGTGTACT	NA	False	NA	NA	False	ATTAAA	-22	NA	113064215	113068066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_113064508_113066160_113066235_113067375
Isoform_4161_18	chr10	-	1144	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-31	2	-31	-2	multi-exon	FALSE	canonical	3	30	junction_2	28	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCCTCTTTCAATGAG	NA	False	NA	0	True	AATAAA	-20	NA	95159458	95011128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95011841_95158447_95158752_95159330
Isoform_41614_499	chr13	+	4453	27	FSM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	229	0	35	0	multi-exon	FALSE	canonical	3	222	junction_12	28.2580040501697	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	18	True	AATAAA	-18	NA	113064216	113105966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
Isoform_4162_3	chr10	-	1684	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-574	5	-6	-5	multi-exon	FALSE	canonical	3	30	junction_2	28	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGTGCCTCTTTCAAT	NA	False	NA	-3	True	AATAAA	-17	NA	95160001	95011131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95011841_95158447_95158752_95159330
Isoform_41621_9	chr13	+	4451	27	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	32	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	62.7163828242367	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTTGTCCATCTCTG	NA	False	NA	15	True	AATAAA	-15	NA	113064213	113105963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081605_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
Isoform_41623_3	chr13	+	8181	10	FSM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	89	4	89	-1	multi-exon	FALSE	canonical	3	29	junction_9	5.32870169256969	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATGGTCTCTGTCATT	NA	False	NA	NA	False	NA	NA	NA	113429781	113507045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
Isoform_41625_3	chr13	+	606	3	ISM	ENSMUSG00000042348.11	ENSMUST00000224858.2	1966	6	-45	233448	43	-232724	5prime_fragment	FALSE	canonical	3	25	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAAAAAATATTAG	NA	False	NA	NA	False	TTTAAA	-19	NA	113931083	114059088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_113931233_114037538_114037690_114058782
Isoform_41626_5	chr13	+	3487	6	FSM	ENSMUSG00000042348.11	ENSMUST00000224858.2	1966	6	-67	-1454	21	-7	multi-exon	FALSE	canonical	3	25	junction_1	177.959995504608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGCGTTTCCTGACTG	NA	False	NA	10	True	AATAAA	-10	NA	113931061	114293990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_113931233_114037538_114037690_114058782_114058928_114070599_114070660_114104117_114104327_114291239
Isoform_41627_7	chr13	+	498	2	ISM	ENSMUSG00000042348.11	ENSMUST00000224068.2	1002	4	-114	232721	3	-232721	5prime_fragment	FALSE	canonical	3	349	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATATTAGCAC	NA	False	NA	NA	False	TTTAAA	-22	NA	113931043	114059091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_113931233_114058782
Isoform_41628_29	chr13	+	1849	4	ISM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	20	188408	20	-186223	5prime_fragment	FALSE	canonical	3	349	junction_1	12.0277457017791	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	113931060	114105589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117
Isoform_4163_5	chr10	-	1669	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-34	-520	-34	1	multi-exon	FALSE	canonical	3	30	junction_2	28	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCGTGTCCATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	95159461	95010606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95011841_95158447_95158752_95159330
Isoform_41631_3	chr13	+	2300	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	-11	1075	-11	386	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGGATTTTAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	113931029	114292922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
Isoform_41632_27	chr13	+	2575	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	21	768	21	693	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATTAAATGCAGAATGT	NA	False	NA	NA	False	AATAAA	-44	NA	113931061	114293229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
Isoform_41633_19	chr13	+	3342	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	21	1	21	-1	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTCCTGACTGACTTTT	NA	False	NA	16	True	AATAAA	-16	NA	113931061	114293996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
Isoform_41634_3	chr13	+	1344	3	FSM	ENSMUSG00000015536.15	ENSMUST00000165669.9	469	3	27	-902	0	-18	multi-exon	FALSE	canonical	3	133	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGATAGGAA	NA	False	NA	NA	False	NA	NA	NA	114954806	114958506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_114954860_114955871_114955994_114957337
Isoform_41636_3	chr13	+	1082	7	NIC	ENSMUSG00000015536.15	novel	1193	7	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	58.0672502840935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATCCTGTCTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	114954788	114965261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961802_114962693_114962818_114964824
Isoform_41638_141	chr13	+	1173	7	FSM	ENSMUSG00000015536.15	ENSMUST00000015680.11	1152	7	-19	-2	0	2	multi-exon	FALSE	canonical	3	133	junction_2	16.9844700306551	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATCCTGTCTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	114954793	114965261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
Isoform_41639_10	chr13	+	1463	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	19	-289	-3	6	multi-exon	FALSE	canonical	3	133	junction_2	16.9844700306551	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTTTTTGATTGGTG	NA	False	NA	NA	False	ATTAAA	-26	NA	114954790	114965548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
Isoform_4164_25	chr10	-	1140	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	0	521	0	-2	multi-exon	FALSE	canonical	3	29	junction_2	28.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCCTCTTTCAATGAG	NA	False	NA	0	True	AATAAA	-20	NA	95159970	95011128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95011841_95158447_95158752_95159846
Isoform_41640_9	chr13	+	1971	6	NIC	ENSMUSG00000015536.15	novel	1193	7	NA	NA	-2	2	intron_retention	FALSE	canonical	3	133	junction_2	18.6010752377383	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATCCTGTCTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	114954791	114965261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114962818_114964824
Isoform_41641_15	chr13	+	1067	6	FSM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	-17	805	-2	2	multi-exon	TRUE	canonical	3	20	junction_1	59.3450924677011	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATCCTGTCTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	114954777	114965261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_114954860_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
Isoform_41642_344	chr13	+	2163	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	444	316	0	-316	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCCCTTGTGCTGCTGG	NA	False	NA	NA	False	AATAAA	-24	NA	117357251	117410635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
Isoform_41644_61	chr13	+	1572	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	347	1004	-97	-1004	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAAGTGTTTGCCT	NA	False	NA	16	True	ATTAAA	-17	NA	117357154	117409947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
Isoform_41648_23	chr13	+	2275	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	332	316	-112	-316	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCCCTTGTGCTGCTGG	NA	False	NA	NA	False	AATAAA	-24	NA	117357139	117410635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
Isoform_4165_11	chr10	-	1693	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	-31	-1	-6	1	multi-exon	FALSE	canonical	3	29	junction_2	28.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCGTGTCCATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	95160001	95010606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95011841_95158447_95158752_95159846
Isoform_41652_6	chr13	+	4184	3	FSM	ENSMUSG00000021732.15	ENSMUST00000022246.9	4114	3	-70	0	-70	0	multi-exon	FALSE	canonical	3	7	junction_2	4	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTACTGTTCTTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	118851164	118928651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_118852248_118918041_118918146_118925654
Isoform_41655_29	chr13	+	1621	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-103	7	-103	-7	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119565033	119593920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41657_10	chr13	+	1685	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-184	24	-184	10	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATGAAATGTTGAAAG	NA	False	NA	85	True	AATAAA	-12	NA	119564952	119593903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_4166_29	chr10	-	1150	3	NIC	ENSMUSG00000045867.11	novel	1661	3	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	18	junction_2	34	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCCTCTTTCAATGAGA	NA	False	NA	1	True	AATAAA	-21	NA	95159995	95011127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_95011841_95158447_95158752_95159862
Isoform_41660_17	chr13	+	2445	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-103	-817	-103	-10	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAAAATGGTATCTTA	NA	False	NA	36	True	AATAAA	-21	NA	119565033	119594744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41661_9	chr13	+	2536	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-184	-827	-184	0	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	False	NA	46	True	AATAAA	-31	NA	119564952	119594754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41662_47	chr13	+	1741	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	-24	834	-24	-7	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119565433	119593920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41663_66	chr13	+	1708	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	9	834	9	-7	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119565466	119593920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41666_37	chr13	+	2538	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	9	4	9	-4	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGTATCTTAAAGAAT	NA	False	NA	42	True	AATAAA	-27	NA	119565466	119594750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41667_33	chr13	+	2561	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	-13	3	-13	-3	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGTATCTTAAAGAATT	NA	False	NA	43	True	AATAAA	-28	NA	119565444	119594751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41668_30	chr13	+	1983	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	-225	-27	-14	-7	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119565443	119593920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41674_13	chr13	+	2837	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	-245	-861	-34	0	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	False	NA	46	True	AATAAA	-31	NA	119565423	119594754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41676_3	chr13	+	2657	14	NIC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	45.0708843421628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599337	119622653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_119599656_119601100_119601227_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
Isoform_41679_55	chr13	+	2551	13	FSM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	14	0	-2	0	multi-exon	FALSE	canonical	3	76	junction_1	23.5189049253763	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599317	119622653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
Isoform_4168_3	chr10	-	1598	2	ISM	ENSMUSG00000045867.11	ENSMUST00000218761.2	2663	3	-137	110898	-5	302	5prime_fragment	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAACAACAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	95160000	95157307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_95158752_95159846
Isoform_41681_3	chr13	+	2453	12	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	35.5078852841925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTATTTCATTTCTTA	NA	False	NA	7	True	AATAAA	-17	NA	119599317	119622651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119620988_119621030_119622262
Isoform_41682_4	chr13	+	3441	12	NIC	ENSMUSG00000062822.9	novel	2795	13	NA	NA	-1	-1	intron_retention	TRUE	canonical	3	76	junction_1	21.4818778131747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTATTTCATTTCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	119599302	119622652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
Isoform_41684_43	chr13	+	2488	13	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	29.2546292633035	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599317	119622653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
Isoform_41686_5	chr13	+	3874	3	NIC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	-1	-65	intron_retention	FALSE	canonical	3	115	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGTCTGCAGATGTGG	NA	False	NA	4	True	AATAAA	-16	NA	119599302	119606296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_119602841_119603402_119603493_119606050
Isoform_41688_28	chr13	+	3436	11	NIC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	30	-4	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	216.614611695518	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCAGCTCTTTGAGT	NA	False	NA	11	True	AATAAA	-11	NA	120151944	120169614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_120152050_120156425_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
Isoform_41689_38	chr13	+	3404	11	NIC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	216.614611695518	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCAGCTCTTTGAGT	NA	False	NA	11	True	AATAAA	-11	NA	120151976	120169614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_120152050_120156425_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
Isoform_41693_503	chr13	+	3304	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	-22	182	-4	-4	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCAGCTCTTTGAGT	NA	False	NA	11	True	AATAAA	-11	NA	120151977	120169614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
Isoform_41700_766	chr13	+	3293	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	-52	4	15	-4	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCAGCTCTTTGAGT	NA	False	NA	11	True	AATAAA	-11	NA	120151929	120169614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
Isoform_4172_43	chr10	-	1371	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	54	-139	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252665	95223667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
Isoform_41724_143	chr13	+	3261	8	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2855	1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	86.1488981534948	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	35922440	36058047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_35922622_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_41727_195	chr13	+	3186	7	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2855	1	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_1	63.2334739060114	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	35922440	36058047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_4173_32	chr10	-	1424	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	1	-139	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252718	95223667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
Isoform_41730_9	chr13	+	2977	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2859	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	104.321426370617	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	35922436	36058045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36055560_36055705_36056494
Isoform_41734_72	chr13	+	4740	34	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	1	66	junction_1	364.511447064866	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGTTGGAAGTAGTTA	NA	False	NA	25	True	ATTAAA	-26	NA	49835697	49887738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_49836121_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
Isoform_41737_3	chr13	-	3916	4	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-15	170	intron_retention	FALSE	non_canonical	0	0	junction_1	82.3097132110718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-2	True	NA	NA	NA	66589194	66577780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66579908_66579991_66581540_66581739_66581867_66589080
Isoform_41738_26	chr13	+	3055	5	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-8739	-234	multi-exon	FALSE	non_canonical	0	0	junction_4	13.2923850380584	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	NA	False	NA	2	True	NA	NA	NA	65651752	65662558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr13_+_65651859_65658192_65658320_65658519_65658581_65659713_65660047_65660130
Isoform_41739_3	chr13	-	3775	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-100	-1088	-60	1088	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	66589239	66576862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
Isoform_41740_3	chr13	-	2697	5	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	16	170	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	72.2582175257597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-2	True	NA	NA	NA	66589163	66577780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_66579908_66579991_66580291_66581478_66581540_66581739_66581867_66589080
Isoform_41742_20	chr13	+	2481	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	720	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	5534	False	NA	10	True	NA	NA	NA	66711973	66724695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
Isoform_41743_8	chr13	+	7640	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	5879	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCGTTTCACCTGTGTC	5534	False	NA	16	True	NA	NA	NA	66711973	66729854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
Isoform_41745_38	chr13	+	464	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	720	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_3	16.3299316185545	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	5534	False	NA	10	True	NA	NA	NA	66711973	66724695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66724529
Isoform_41747_50	chr13	+	2404	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	90752	-1	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	80.650852444348	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	36037546	36058045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_36037615_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_41748_46	chr13	+	2445	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	90713	1	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	80.650852444348	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	36037507	36058047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_36037615_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_41749_34	chr13	+	1844	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74227	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	9.14549069213894	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGGGCATAATTGTG	NA	False	NA	23	True	AATAAA	-16	NA	21120575	21208422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
Isoform_41752_3	chr13	+	1445	6	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74231	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	30.6241734582339	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGGGCATAATTGTGT	NA	False	NA	24	True	AATAAA	-17	NA	21120571	21208423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21189200_21189298_21197281_21197359_21207378
Isoform_41753_44	chr13	+	4437	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	518	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	296.576735432839	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51255433	51306582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_51255548_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
Isoform_41758_24	chr13	+	2106	11	NNC	ENSMUSG00000025451.16	novel	1731	11	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	104.451376247515	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119565458	119593920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41759_14	chr13	+	2906	11	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	6	-29	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	104.451376247515	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTTGTTTCTTCTAAC	NA	False	NA	17	True	AATAAA	-2	NA	119565463	119594725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_41763_31	chr13	+	1380	3	Intergenic	novelGene_3024	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	41	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATGCTTGCTTTCCCTG	NA	False	NA	8	True	AATAAA	-15	NA	49121624	49123379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_49122081_49122413_49122767_49122808
Isoform_41764_6	chr13	+	1383	2	Intergenic	novelGene_3025	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGCTTGCTTTCCCTGT	NA	False	NA	9	True	AATAAA	-16	NA	49121664	49123380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_49122081_49122413
Isoform_41765_31	chr13	+	1146	3	Intergenic	novelGene_3027	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	41	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTGCTTTCCCTGTT	NA	False	NA	10	True	AATAAA	-17	NA	49121860	49123381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_49122081_49122413_49122767_49122808
Isoform_41766_9	chr13	+	1270	2	Intergenic	novelGene_3026	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTGCTTTCCCTGTT	NA	False	NA	10	True	AATAAA	-17	NA	49121778	49123381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_49122081_49122413
Isoform_41767_66	chr13	+	4509	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	289.12599329704	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGGCTGTGAACTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	51254916	51306583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_51255102_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
Isoform_41772_15	chr13	+	1311	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-326187	285	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	221.287645887027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTAATGG	NA	False	NA	3	True	NA	NA	NA	61919374	62260146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_61919514_62254561_62254689_62254881_62254943_62259162
Isoform_41776_14	chr13	+	1854	3	Intergenic	novelGene_3173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTGGCTATCATTGC	NA	False	NA	NA	False	NA	NA	NA	66773922	66784460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_66774068_66782550_66782678_66782878
Isoform_41777_5	chr13	+	1394	4	Intergenic	novelGene_3172	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	85.5608944943113	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGTGTTATAAATCTCT	NA	False	NA	NA	False	NA	NA	NA	66773895	66784009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_66774068_66782550_66782678_66782878_66783164_66783199
Isoform_41780_3	chr13	+	6048	23	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-118	-5049	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	46.3507334987028	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCTTATATAGAAACAGA	NA	False	NA	NA	False	AATAAA	-12	NA	55359513	55458519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
Isoform_41781_6	chr13	+	5977	23	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-44	-5046	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	46.3507334987028	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTATATAGAAACAGAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	55359587	55458522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
Isoform_41782_6	chr13	+	7706	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-43	-1739	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	47.9836534862692	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATTCGATTCCACT	NA	False	NA	23	True	AATAAA	-20	NA	55359588	55461829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
Isoform_41784_3	chr13	+	7723	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-17	-1734	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	64.4796344894176	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCGATTCCACTGGTCA	NA	False	NA	28	True	AATAAA	-25	NA	55359614	55461834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
Isoform_41785_18	chr13	+	2944	3	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24302	474	intron_retention	FALSE	canonical	3	24	junction_2	9	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66901202	66927680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66901313_66924718_66927256_66927383
Isoform_41786_5	chr13	+	2137	5	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24302	474	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	17.0202085768653	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66901202	66927680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66901313_66924718_66924862_66925311_66925946_66926302_66927256_66927383
Isoform_41787_8	chr13	+	554	3	NNC	ENSMUSG00000113760.2	novel	569	4	NA	NA	-81618	-1200	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	37	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGTATAGTCTCATAA	NA	False	NA	NA	False	NA	NA	NA	66098404	66186861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66098504_66186206_66186334_66186533
Isoform_41790_24	chr13	+	1971	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	4	-177	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCAGTATTTCATTG	NA	False	NA	7	True	ATTAAA	-19	NA	76328547	76338048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_41791_4	chr13	+	2358	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTGGGTTACATTTGT	NA	False	NA	1	True	ATTAAA	-14	NA	76328545	76338433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_41792_25	chr13	+	559	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47306	28	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	22.5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCTTGGTTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	66439389	66453255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66439588_66448255_66448445_66453083
Isoform_41793_7	chr13	+	581	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47304	-4288	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCTTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	66439387	66448939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_66439588_66448255_66448445_66448747
Isoform_41799_13	chr13	+	1507	2	Intergenic	novelGene_3343	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTTTTGTAACTTAGT	1864	False	NA	2	True	AATAAA	-13	NA	113872543	113876376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_113872828_113875153
Isoform_41800_13	chr13	+	1645	3	Intergenic	novelGene_3344	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	12	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTAACTTAGTCTGA	1864	False	NA	6	True	AATAAA	-17	NA	113872543	113876380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_113872828_113872948_113873083_113875153
Isoform_41801_6	chr13	+	1495	2	Intergenic	novelGene_3345	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTTTGTAACTTAGTC	2132	False	NA	3	True	AATAAA	-14	NA	113872811	113876377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_113873083_113875153
Isoform_41803_3	chr13	+	1925	9	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-569	-1917	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	56585598	56620135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_56585844_56585944_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56619742
Isoform_41804_6	chr13	+	2286	9	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-570	-2335	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	5.67340285895511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAATGTGTTTTTGCGT	NA	False	NA	NA	False	AATAAA	-20	NA	56585597	56619717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_56585844_56585944_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56618964
Isoform_41805_11	chr13	+	1287	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118701	291	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	214.715832878921	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTAATGGTGTCTG	1166	False	NA	9	True	NA	NA	NA	62126860	62260152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162
Isoform_41811_20	chr13	+	4586	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-366	6	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	73.6283837177545	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTCTGTGTGTTCAC	8351	False	NA	20	True	AATAAA	-26	NA	97207784	97266029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_97207887_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_41813_3	chr13	+	856	3	Intergenic	novelGene_3116	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	11	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	61765181	61779801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_61765281_61776870_61776998_61779171
Isoform_41814_16	chr13	+	2463	4	Intergenic	novelGene_3115	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	9.0921211313239	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCCTCCGACTCTCTT	NA	False	NA	NA	False	NA	NA	NA	61765165	61783728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_61765281_61776870_61776998_61779171_61779363_61781698
Isoform_41815_8	chr13	+	4676	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	148	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	74.1676029903443	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8865	False	NA	14	True	AATAAA	-20	NA	97208298	97266023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_97208497_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_41818_8	chr13	+	2719	11	NNC	ENSMUSG00000035139.15	novel	784	3	NA	NA	-11262	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	44.4886502380101	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	4840	False	NA	8	True	AATAAA	-20	NA	51822506	51838080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_51823075_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
Isoform_41828_4	chr13	+	1905	3	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	104.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTGGCTATCATTGCA	123	False	NA	NA	False	NA	NA	NA	66589299	66784461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_66589495_66782550_66782678_66782878
Isoform_41831_9	chr13	+	2671	4	NNC	ENSMUSG00000051037.16	novel	2712	4	NA	NA	229	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGTTTATTATTATTAT	NA	False	NA	14	True	AATAAA	-19	NA	67342827	67357362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_67342876_67346596_67346724_67347212_67347309_67354962
Isoform_41832_3	chr13	+	2545	3	NNC	ENSMUSG00000051037.16	novel	2712	4	NA	NA	227	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGTTTATTATTATTA	NA	False	NA	13	True	AATAAA	-18	NA	67342825	67357361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_67342876_67347212_67347309_67354962
Isoform_41833_12	chr13	+	169	2	Intergenic	novelGene_3113	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAAAAGAGTT	5165	False	NA	NA	False	NA	NA	NA	59828472	59828704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_59828548_59828610
Isoform_41834_4	chr13	+	2800	2	Genic_Genomic	ENSMUSG00000097906.2	novel	955	1	NA	NA	-12319	1728	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGTTTGTTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	67946045	67961047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_+_67946100_67958301
Isoform_41837_5	chr13	+	991	6	NNC	ENSMUSG00000021420.14	novel	726	5	NA	NA	-11723	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	93.2660710011953	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36404381	36721567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_36404475_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_41839_5	chr13	+	618	3	NNC	ENSMUSG00000021534.9	novel	1826	3	NA	NA	8408	-1	intron_retention	FALSE	canonical	3	9	junction_1	4.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTAGCAGCTGTGTTTG	NA	False	NA	2	True	AATAAA	-18	NA	68753965	68761405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_68754010_68759279_68759397_68760948
Isoform_4184_14	chr10	-	2159	3	FSM	ENSMUSG00000020027.19	ENSMUST00000172070.8	2153	3	-21	15	-21	-15	multi-exon	FALSE	canonical	3	27	junction_2	233.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGCACTCATTACTT	NA	False	NA	-13	True	AATAAA	-17	NA	95251367	95247366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95248973_95250692_95251054_95251175
Isoform_41840_4	chr13	+	855	2	Antisense	novelGene_ENSMUSG00000021375.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGCATTAATTTGTGTC	NA	False	NA	NA	False	AATAAA	-43	NA	46966182	46969128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_46966409_46968499
Isoform_41844_4	chr13	+	2101	11	NNC	ENSMUSG00000035910.16	novel	6634	10	NA	NA	-2991	430	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	5.69209978830308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATTTAGTTTCAGAGA	NA	False	NA	NA	False	AATAAA	-17	NA	25236995	25389948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_25237155_25240186_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
Isoform_41847_3	chr13	+	1186	4	NNC	ENSMUSG00000076749.3	novel	924	3	NA	NA	-16216	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTATTTTTGTCAGTCT	NA	False	NA	NA	False	AATATA	-16	NA	19382056	19401195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_19382318_19398272_19398603_19400033_19400079_19400645
Isoform_41848_4	chr13	+	612	2	Antisense	novelGene_ENSMUSG00000095930.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCACGCCAGCATTTGT	NA	False	NA	NA	False	NA	NA	NA	120204480	120207618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_120204630_120207155
Isoform_41849_3	chr13	+	3558	2	Antisense	novelGene_ENSMUSG00000014164.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAATTAATTAAATGGA	NA	False	NA	NA	False	NA	NA	NA	58171380	58175634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_58171531_58172226
Isoform_41854_7	chr13	+	181	1	Intergenic	novelGene_2908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGGAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	9071963	9072144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_9072000_9072100
Isoform_41855_4	chr13	-	275	1	Intergenic	novelGene_3004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACCGCAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	43799989	43799714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_43799700_43800000
Isoform_41856_3	chr13	+	177	1	Intergenic	novelGene_2909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCAGATGTA	9572	False	NA	NA	False	NA	NA	NA	9103536	9103713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_9103500_9103700
Isoform_41858_119	chr13	+	185	1	Intergenic	novelGene_3005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	44539348	44539533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_44539300_44539500
Isoform_41859_23	chr13	+	154	1	Intergenic	novelGene_2910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAGCTCAAAAGCACAC	NA	False	NA	NA	False	NA	NA	NA	9104410	9104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_9104400_9104600
Isoform_41863_431	chr14	-	177	1	Intergenic	novelGene_3368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGGGTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	3932520	3932343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_3932300_3932500
Isoform_41864_3	chr13	+	313	1	Intergenic	novelGene_3007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGTTTTTTTAAAAGA	7628	False	NA	NA	False	NA	NA	NA	44790043	44790356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_44790000_44790400
Isoform_41865_10	chr13	+	174	1	Intergenic	novelGene_3008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTGAGCGAGCAGGGTC	7640	False	NA	NA	False	NA	NA	NA	44790055	44790229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_44790100_44790200
Isoform_41868_4	chr13	-	2080	1	Antisense	novelGene_ENSMUSG00000038518.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44883911	44881831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_44881800_44883900
Isoform_41869_3	chr13	-	1039	1	Intergenic	novelGene_2911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAAAAAGTGT	NA	False	NA	NA	False	AATGAA	-7	NA	9154079	9153040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_9153000_9154100
Isoform_41870_10	chr13	-	169	1	Intergenic	novelGene_3009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	44907515	44907346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_44907300_44907500
Isoform_41871_73	chr13	-	227	1	Intergenic	novelGene_3010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGACTGAGAAGAAATTT	NA	False	NA	NA	False	AAGAAA	-32	NA	44917501	44917274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_44917300_44917500
Isoform_41873_3	chr13	-	2498	1	Intergenic	novelGene_3011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	4512	False	NA	NA	False	NA	NA	NA	44942664	44940166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_44940200_44942700
Isoform_41874_6	chr13	+	175	1	Intergenic	novelGene_2912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAAGGTATCTGA	NA	False	NA	NA	False	NA	NA	NA	9159985	9160160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_9160000_9160200
Isoform_41875_4	chr13	-	229	1	Intergenic	novelGene_3012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCACACAATTCATAAACAA	NA	False	NA	NA	False	AAAAAG	-28	NA	44957646	44957417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_44957400_44957600
Isoform_41878_18	chr13	-	179	1	Intergenic	novelGene_3013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAAAG	4713	False	NA	NA	False	NA	NA	NA	44978283	44978104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_44978100_44978300
Isoform_41890_8	chr13	+	3126	1	Intergenic	novelGene_3014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45125211	45128337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_45125200_45128300
Isoform_41892_40	chr13	-	187	1	Intergenic	novelGene_3015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCTGCACAATTACTA	NA	False	NA	NA	False	NA	NA	NA	45174098	45173911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_45173900_45174100
Isoform_41894_321	chr13	-	815	1	FSM	ENSMUSG00000078915.3	ENSMUST00000109187.3	630	1	-57	-128	-57	128	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	45232660	45231845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_45231800_45232700
Isoform_41897_18	chr13	-	179	1	Intergenic	novelGene_3016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAACGAAAAG	NA	False	NA	NA	False	NA	NA	NA	45277894	45277715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_45277700_45277900
Isoform_41898_3	chr13	-	178	1	Intergenic	novelGene_3017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGTTTGTTTGTTTGTT	7733	False	NA	NA	False	NA	NA	NA	45844729	45844551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_45844600_45844700
Isoform_4191_181	chr10	-	2205	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	2	15	2	-15	multi-exon	FALSE	canonical	3	447	junction_2	23.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGCACTCATTACTT	NA	False	NA	-13	True	AATAAA	-17	NA	95252717	95247366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95248973_95250692_95251054_95252479
Isoform_41915_3	chr13	-	172	1	Intergenic	novelGene_3018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATGGGGTCTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	46991966	46991794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_46991800_46992000
Isoform_41916_6	chr13	+	153	1	Intergenic	novelGene_3019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47060264	47060417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_47060300_47060400
Isoform_41920_15	chrX	+	223	1	Intergenic	novelGene_12009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGAGGTGTACTGACAT	NA	False	NA	NA	False	NA	NA	NA	72791917	72792140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_72791900_72792100
Isoform_41922_26	chr13	-	2276	1	FSM	ENSMUSG00000044231.4	ENSMUST00000052747.4	2294	1	16	2	16	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGCTGGAAACGTGTC	NA	False	NA	-3	True	AATAAA	-16	NA	47168310	47166034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_47166000_47168300
Isoform_41924_38	chr13	+	176	1	Intergenic	novelGene_3020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	47181206	47181382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_47181200_47181400
Isoform_41927_3	chr13	-	1338	1	Antisense	novelGene_ENSMUSG00000038080.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47214326	47212988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_47213000_47214300
Isoform_41931_6	chr13	+	2667	2	NNC	ENSMUSG00000048264.17	novel	4801	36	NA	NA	4	-386960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	9326567	9329254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_+_9327323_9327342
Isoform_41937_3	chr13	-	2283	1	NIC	ENSMUSG00000050954.16	novel	4175	4	NA	NA	7	-16639	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	48666920	48664637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_48664600_48666900
Isoform_41939_4	chr13	-	2479	1	FSM	ENSMUSG00000103373.2	ENSMUST00000195552.2	2390	1	-1470	1381	-1470	-1381	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATTAAAAAAAAGAAG	NA	False	NA	NA	False	AATACA	-1	NA	48699979	48697500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_48697500_48700000
Isoform_41941_276	chr13	-	170	1	Intergenic	novelGene_3021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGATGTAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	48718339	48718169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_48718200_48718300
Isoform_41942_40	chr13	+	176	1	Intergenic	novelGene_3022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGGCATTATAGG	NA	False	NA	NA	False	NA	NA	NA	48757099	48757275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_48757100_48757300
Isoform_41945_13	chr13	+	4540	1	Intergenic	novelGene_3023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACACTAAAA	NA	False	NA	NA	False	NA	NA	NA	49093571	49098111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_49093600_49098100
Isoform_41949_4	chr13	-	176	1	Intergenic	novelGene_3028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATTGTTCTGTTGGGG	NA	False	NA	NA	False	NA	NA	NA	49149407	49149231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_49149200_49149400
Isoform_41950_32	chr13	-	177	1	Intergenic	novelGene_3029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTTCTTTTA	7807	False	NA	NA	False	NA	NA	NA	49176164	49175987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_49176000_49176200
Isoform_41952_5	chr13	+	176	1	Intergenic	novelGene_3030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAGAAATAAGGCAC	NA	False	NA	NA	False	NA	NA	NA	49296550	49296726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_49296600_49296700
Isoform_41955_26	chr13	-	191	1	Intergenic	novelGene_2914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	9403622	9403431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_9403400_9403600
Isoform_41956_16	chr13	-	1428	1	Intergenic	novelGene_3031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49594761	49593333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_49593300_49594800
Isoform_41959_3	chr13	+	174	1	Intergenic	novelGene_3032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAAAAATTGGACA	NA	False	NA	NA	False	NA	NA	NA	49795275	49795449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_49795300_49795400
Isoform_41963_27	chr13	-	173	1	Intergenic	novelGene_2915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTTTAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	9454567	9454394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_9454400_9454600
Isoform_41964_31	chr13	-	185	1	Intergenic	novelGene_3033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCGAGTTATTCCGGGC	NA	False	NA	NA	False	NA	NA	NA	51174699	51174514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_51174500_51174700
Isoform_41965_99	chr13	+	176	1	Intergenic	novelGene_3034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAAGGGGGGGGGCTCG	NA	False	NA	NA	False	NA	NA	NA	51219011	51219187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_51219000_51219200
Isoform_41966_18	chr13	-	182	1	Intergenic	novelGene_3035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAAATCTATTGGCTC	NA	False	NA	NA	False	NA	NA	NA	51234337	51234155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_51234200_51234300
Isoform_41967_25	chr13	-	3006	1	Intergenic	novelGene_3036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51254786	51251780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_51251800_51254800
Isoform_41990_4	chr13	-	1002	1	Antisense	novelGene_ENSMUSG00000021395.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	AAGAAA	-21	NA	51306464	51305462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_51305500_51306500
Isoform_41993_24	chr13	-	181	1	Intergenic	novelGene_3037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTGACCATCTC	NA	False	NA	NA	False	NA	NA	NA	51341272	51341091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_51341100_51341300
Isoform_41994_4	chr13	+	185	1	Intergenic	novelGene_3038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	51606855	51607040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_51606900_51607000
Isoform_41995_63	chr13	+	178	1	Intergenic	novelGene_3039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAAGTGGGGTAG	NA	False	NA	NA	False	NA	NA	NA	51672606	51672784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_51672600_51672800
Isoform_41996_4	chr13	+	155	1	Intergenic	novelGene_3040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGTTTCTATTTC	NA	False	NA	NA	False	NA	NA	NA	51742518	51742673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_51742500_51742700
Isoform_41997_6	chr13	-	175	1	Intergenic	novelGene_3041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	6305	False	NA	NA	False	NA	NA	NA	51761260	51761085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_51761100_51761300
Isoform_41998_6	chr13	+	200	1	Intergenic	novelGene_3042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGGCTTAG	NA	False	NA	NA	False	NA	NA	NA	51784046	51784246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_51784000_51784200
Isoform_41999_54	chr13	+	2255	1	NIC	ENSMUSG00000062248.6	novel	692	3	NA	NA	93	-3081	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51799360	51801615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_51799400_51801600
Isoform_42004_28	chr13	-	177	1	Intergenic	novelGene_3043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	51862575	51862398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_51862400_51862600
Isoform_42005_7	chr13	-	221	1	Intergenic	novelGene_3044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTATTTTAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-19	NA	51880865	51880644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_51880600_51880900
Isoform_42006_35	chr9	+	167	1	Intergenic	novelGene_11702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	110292252	110292419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_110292300_110292400
Isoform_42007_69	chr13	+	181	1	Intergenic	novelGene_3046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGAGCTCATTAT	NA	False	NA	NA	False	NA	NA	NA	51939757	51939938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_51939800_51939900
Isoform_42010_13	chr13	+	175	1	Intergenic	novelGene_3047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAACTTACGAGT	NA	False	NA	NA	False	NA	NA	NA	52360682	52360857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_52360700_52360900
Isoform_42011_23	chr13	-	177	1	Intergenic	novelGene_3049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGAGAGAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	52747299	52747122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_52747100_52747300
Isoform_42014_25	chr13	+	716	1	Intergenic	novelGene_3050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	53265764	53266480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_53265800_53266500
Isoform_42015_12	chr13	-	199	1	Intergenic	novelGene_3051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGCTAATGACTGTATG	NA	False	NA	0	True	NA	NA	NA	53344588	53344389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_53344400_53344600
Isoform_42020_7	chr13	+	174	1	Intergenic	novelGene_3052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATTAAATGATTA	NA	False	NA	NA	False	NA	NA	NA	53597268	53597442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_53597300_53597400
Isoform_42021_18	chr13	+	179	1	Intergenic	novelGene_3053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	53611416	53611595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_53611400_53611600
Isoform_42023_4	chr13	+	185	1	Intergenic	novelGene_3054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTTTAAAAAGGAATG	NA	False	NA	NA	False	NA	NA	NA	54017627	54017812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_54017600_54017800
Isoform_42025_17	chr13	+	174	1	Intergenic	novelGene_2916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGCATT	NA	False	NA	NA	False	NA	NA	NA	9797827	9798001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_9797800_9798000
Isoform_42029_3	chr13	+	3924	1	Intergenic	novelGene_2917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	9798742	9802666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_9798700_9802700
Isoform_42039_4	chr13	+	173	1	Intergenic	novelGene_3055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAACA	NA	False	NA	NA	False	NA	NA	NA	54714621	54714794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_54714600_54714800
Isoform_42042_3	chr13	-	156	1	Intergenic	novelGene_3056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACTGTGGACTTCT	2373	False	NA	NA	False	NA	NA	NA	54764189	54764033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_54764000_54764200
Isoform_42044_75	chr13	+	171	1	Intergenic	novelGene_3058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATATATAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	54779376	54779547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_54779400_54779500
Isoform_42046_93	chr13	-	177	1	Intergenic	novelGene_3059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTG	NA	False	NA	NA	False	NA	NA	NA	54808355	54808178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_54808200_54808400
Isoform_42062_5	chr13	-	177	1	Intergenic	novelGene_3060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAATTAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	54859802	54859625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_54859600_54859800
Isoform_42063_15	chr13	+	2753	1	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	1	-2932	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54937276	54940029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_54937300_54940000
Isoform_42065_9	chr13	-	173	1	Intergenic	novelGene_3061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	54963369	54963196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_54963200_54963400
Isoform_42066_4	chr13	-	163	1	Intergenic	novelGene_3062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATTAAAAAAAAAA	1868	False	NA	NA	False	NA	NA	NA	55005055	55004892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55004900_55005100
Isoform_42067_44	chr13	+	153	1	Intergenic	novelGene_3063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATATAATAAATAAATAAAT	7824	False	NA	NA	False	NA	NA	NA	55198281	55198434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55198300_55198400
Isoform_42070_3	chr13	+	611	1	FSM	ENSMUSG00000094446.2	ENSMUST00000075962.9	483	1	-16	-112	-16	112	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-12	NA	55233573	55234184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_55233600_55234200
Isoform_42071_13	chr13	+	172	1	Intergenic	novelGene_3064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTTTTAAAAAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	55238626	55238798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55238600_55238800
Isoform_42072_56	chr13	+	175	1	Intergenic	novelGene_3065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAATTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	55241996	55242171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55242000_55242200
Isoform_42076_28	chr13	-	175	1	Intergenic	novelGene_3066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAATTGA	122	False	NA	NA	False	NA	NA	NA	55329627	55329452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55329500_55329600
Isoform_42077_27	chr13	+	177	1	Intergenic	novelGene_3067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAGAAAAAAAAAAA	9119	False	NA	NA	False	NA	NA	NA	55345087	55345264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55345100_55345300
Isoform_42079_8	chr13	+	305	1	Intergenic	novelGene_3068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCATGTACTTAG	NA	False	NA	NA	False	NA	NA	NA	55354018	55354323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55354000_55354300
Isoform_42082_8	chr13	+	169	1	ISM	ENSMUSG00000021488.9	ENSMUST00000225982.2	1822	4	22721	515	22405	-515	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTAAAAAAAAACCAAAA	3429	False	NA	NA	False	NA	NA	NA	55382603	55382772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_55382600_55382800
Isoform_42083_14	chr13	-	172	1	Intergenic	novelGene_3069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAATAAAT	3988	False	NA	NA	False	NA	NA	NA	55397204	55397032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55397000_55397200
Isoform_42084_14	chr13	+	180	1	Intergenic	novelGene_3070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACATTAAAAAAATA	3449	False	NA	NA	False	NA	NA	NA	55408532	55408712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55408500_55408700
Isoform_42085_4	chr13	+	211	1	Intergenic	novelGene_3071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAGAAGAAG	609	False	NA	NA	False	AATAAA	-3	NA	55414196	55414407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55414200_55414400
Isoform_42086_20	chr13	-	182	1	Intergenic	novelGene_3072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAAATCTTTTTTA	9803	False	NA	NA	False	NA	NA	NA	55422458	55422276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55422300_55422500
Isoform_42087_8	chr13	+	193	1	Intergenic	novelGene_3073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGTATACAGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	55433029	55433222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55433000_55433200
Isoform_42088_69	chr11	-	177	1	Intergenic	novelGene_1686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	3973	False	NA	NA	False	NA	NA	NA	69877005	69876828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_69876800_69877000
Isoform_42090_16	chr13	-	1103	1	Antisense	novelGene_ENSMUSG00000021488.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	55455177	55454074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_55454100_55455200
Isoform_42092_34	chr11	+	173	1	Intergenic	novelGene_2275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	115361513	115361686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_115361500_115361700
Isoform_42111_10	chr13	+	3725	1	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	104818	1	23632	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	NA	False	NA	14	True	AGTAAA	-17	NA	55462412	55466137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_55462400_55466100
Isoform_42119_10	chr13	+	2311	1	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	106232	1	25046	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	NA	False	NA	14	True	AGTAAA	-17	NA	55463826	55466137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_55463800_55466100
Isoform_4212_22	chr10	-	2257	3	FSM	ENSMUSG00000112261.2	ENSMUST00000219379.2	660	3	26	-1623	26	1623	multi-exon	FALSE	canonical	3	19	junction_2	4.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACTGGGGGTGCATAT	1579	False	NA	NA	False	NA	NA	NA	95297060	95279554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95281620_95296475_95296588_95296980
Isoform_42129_9	chr13	-	2091	1	Genic_Genomic	ENSMUSG00000034789.9	novel	NA	NA	NA	NA	-18	6	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGGTGTCAAAACACCT	6423	False	NA	-11	True	AATAAA	-25	NA	55469777	55467686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_55467700_55469800
Isoform_42133_3	chr13	+	2099	1	Intergenic	novelGene_3074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGACTCCTTCAGTG	125	False	NA	NA	False	NA	NA	NA	55477708	55479807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55477700_55479800
Isoform_42135_4	chr13	-	169	1	Intergenic	novelGene_3075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACAAGATCACTGC	7415	False	NA	NA	False	NA	NA	NA	55480648	55480479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55480500_55480600
Isoform_42136_4	chr13	-	166	1	Intergenic	novelGene_3076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	55489659	55489493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55489500_55489700
Isoform_42139_5	chr13	+	160	1	Intergenic	novelGene_3077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGACAAGA	NA	False	NA	NA	False	NA	NA	NA	55512286	55512446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55512300_55512400
Isoform_42140_675	chr5	+	174	1	Intergenic	novelGene_8975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	675	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	666	False	NA	NA	False	NA	NA	NA	129919224	129919398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_129919200_129919400
Isoform_42141_4	chr13	-	180	1	Intergenic	novelGene_3078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	55538393	55538213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55538200_55538400
Isoform_42142_10	chr13	-	166	1	Intergenic	novelGene_3079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTGGAGCAAGCGAGAAA	NA	False	NA	NA	False	NA	NA	NA	55543286	55543120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55543100_55543300
Isoform_42143_160	chr13	-	176	1	Intergenic	novelGene_3080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	4160	False	NA	NA	False	NA	NA	NA	55566960	55566784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55566800_55567000
Isoform_42144_33	chr13	+	186	1	Intergenic	novelGene_3081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAATTATTGGGGCTAT	NA	False	NA	NA	False	NA	NA	NA	55572014	55572200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55572000_55572200
Isoform_42148_29	chrX	+	177	1	Intergenic	novelGene_11997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTCT	NA	False	NA	NA	False	NA	NA	NA	70204136	70204313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_70204100_70204300
Isoform_4215_10	chr10	-	2148	2	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	25	1625	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGGGGGTGCATATCT	1578	False	NA	NA	False	NA	NA	NA	95297061	95279552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_95281620_95296980
Isoform_42150_3	chr13	+	2579	1	Intergenic	novelGene_3083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-15	NA	55713310	55715889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55713300_55715900
Isoform_42151_10	chr13	+	175	1	Intergenic	novelGene_3084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAACAAAATAAAAGT	1792	False	NA	NA	False	NA	NA	NA	55716559	55716734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55716600_55716700
Isoform_42153_3	chr13	-	175	1	Intergenic	novelGene_3085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTAACC	NA	False	NA	NA	False	NA	NA	NA	55745713	55745538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55745500_55745700
Isoform_42155_13	chr13	-	241	1	Intergenic	novelGene_3086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8913	False	NA	NA	False	NA	NA	NA	55775593	55775352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55775400_55775600
Isoform_42159_14	chr13	+	177	1	Intergenic	novelGene_3087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55818815	55818992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55818800_55819000
Isoform_42162_4	chr13	+	474	1	Intergenic	novelGene_3088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	55838027	55838501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55838000_55838500
Isoform_42163_48	chr13	+	176	1	Intergenic	novelGene_3089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCCAGGGGCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	55838682	55838858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55838700_55838900
Isoform_42164_22	chr13	+	832	1	NIC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	5	-9540	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	ACTAAA	-41	NA	55840941	55841773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55840900_55841800
Isoform_4217_9	chr10	-	2167	2	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	7799	1627	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGGGGTGCATATCTTT	9352	False	NA	NA	False	NA	NA	NA	95289287	95279550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_95281620_95289189
Isoform_42173_95	chr13	+	157	1	Intergenic	novelGene_3091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGCAAACAAG	NA	False	NA	NA	False	NA	NA	NA	55859414	55859571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55859400_55859600
Isoform_42174_14	chr13	+	1348	1	NIC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	44	-5085	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55862506	55863854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_55862500_55863900
Isoform_42175_17	chr13	-	174	1	Intergenic	novelGene_3092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAGAGAGAGATC	NA	False	NA	NA	False	NA	NA	NA	55877014	55876840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_55876800_55877000
Isoform_42177_138	chr13	+	173	1	Intergenic	novelGene_3093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1329	False	NA	NA	False	NA	NA	NA	55906628	55906801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55906600_55906800
Isoform_42178_58	chr13	+	178	1	Intergenic	novelGene_3094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	55921822	55922000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_55921800_55922000
Isoform_42180_32	chr13	+	179	1	Intergenic	novelGene_3095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTCCAT	NA	False	NA	NA	False	NA	NA	NA	56207898	56208077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_56207900_56208100
Isoform_42184_33	chr13	+	181	1	Intergenic	novelGene_3096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGGAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	56315200	56315381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_56315200_56315400
Isoform_42185_4	chr13	+	207	1	Intergenic	novelGene_3097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTGATGTCCTTATA	2547	False	NA	NA	False	NA	NA	NA	56508450	56508657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_56508400_56508700
Isoform_42186_17	chr13	+	174	1	Intergenic	novelGene_3098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAAAAAGATTTTC	8064	False	NA	NA	False	NA	NA	NA	56622328	56622502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_56622300_56622500
Isoform_42187_3	chr13	-	1211	1	Intergenic	novelGene_3099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56855580	56854369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_56854400_56855600
Isoform_4219_3	chr10	-	4059	2	ISM	ENSMUSG00000112261.2	ENSMUST00000219379.2	660	3	16	11441	16	-11441	5prime_fragment	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAATTATTCTTAATAT	1569	False	NA	NA	False	NA	NA	NA	95297070	95292618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_95296588_95296980
Isoform_42192_21	chr19	+	182	1	Intergenic	novelGene_5873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTTGTATA	NA	False	NA	NA	False	NA	NA	NA	46215529	46215711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_46215500_46215700
Isoform_42198_32	chr13	-	1192	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	1485	1	1485	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATTGAGTGAGAGTAT	816	False	NA	-6	True	AATAAA	-14	NA	58274885	58273693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58273700_58274900
Isoform_42203_5	chr13	-	2693	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	-17	2	-17	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGATTGAGTGAGAGTA	NA	False	NA	-7	True	AATAAA	-13	NA	58276387	58273694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58273700_58276400
Isoform_42208_9	chr13	-	1643	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	0	1035	0	-1035	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTCTAACATTTTTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	58276370	58274727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_58274700_58276400
Isoform_42211_4	chr13	-	163	1	Intergenic	novelGene_3100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATACCCAAATATGTCA	NA	False	NA	NA	False	NA	NA	NA	58295732	58295569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_58295600_58295700
Isoform_42212_6	chr13	-	180	1	Intergenic	novelGene_3101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTTTTCAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	58302456	58302276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_58302300_58302500
Isoform_42217_5	chrUn_GL456378v1	+	177	1	Intergenic	novelGene_11778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	17174	17351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrUn_GL456378v1_+_17200_17400
Isoform_42219_492	chr13	-	178	1	Intergenic	novelGene_3102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	492	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACCTTTG	NA	False	NA	NA	False	NA	NA	NA	58415677	58415499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_58415500_58415700
Isoform_42220_9	chr13	-	174	1	Intergenic	novelGene_3103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAATAAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	58515240	58515066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_58515100_58515200
Isoform_42228_6	chr13	+	280	1	Antisense	novelGene_ENSMUSG00000021546.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTGTAAGGAACTAAAA	NA	False	NA	NA	False	NA	NA	NA	58539763	58540043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_58539800_58540000
Isoform_42229_5	chr13	+	395	1	Antisense	novelGene_ENSMUSG00000021546.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATGCAGGAC	NA	False	NA	NA	False	TTTAAA	-13	NA	58539763	58540158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_58539800_58540200
Isoform_42236_14	chr9	-	185	1	Intergenic	novelGene_11433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATAAAAGT	8198	False	NA	NA	False	NA	NA	NA	66839476	66839291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_66839300_66839500
Isoform_42238_16	chr13	-	156	1	Intergenic	novelGene_3106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAATGTTGCCCTT	NA	False	NA	NA	False	NA	NA	NA	58650756	58650600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_58650600_58650800
Isoform_42241_33	chr13	+	173	1	Intergenic	novelGene_2918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATATCTAGCTTC	NA	False	NA	NA	False	NA	NA	NA	12250982	12251155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_12251000_12251200
Isoform_42244_29	chr13	-	180	1	Intergenic	novelGene_3107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGCAATAAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	58794709	58794529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_58794500_58794700
Isoform_42245_41	chr13	-	175	1	Intergenic	novelGene_3108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGATAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	58853975	58853800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_58853800_58854000
Isoform_42247_16	chr13	-	169	1	Intergenic	novelGene_3109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAGAATCACTC	NA	False	NA	NA	False	NA	NA	NA	59086274	59086105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_59086100_59086300
Isoform_42248_3	chr13	-	172	1	Intergenic	novelGene_3110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATATATCTCTCAG	9063	False	NA	NA	False	NA	NA	NA	59548300	59548128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_59548100_59548300
Isoform_4225_1341	chr10	-	651	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	13	-3	0	0	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337789	95316666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
Isoform_42258_4	chr13	+	175	1	Intergenic	novelGene_3111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59792349	59792524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_59792300_59792500
Isoform_42259_3	chr13	-	175	1	Intergenic	novelGene_3112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAGTGTGGATATG	NA	False	NA	NA	False	NA	NA	NA	59826227	59826052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_59826100_59826200
Isoform_42264_5	chr13	+	2138	1	Antisense	novelGene_ENSMUSG00000035248.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59937241	59939379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_59937200_59939400
Isoform_42265_3	chr13	+	2044	1	Intergenic	novelGene_3114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACCAAACCAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	59977102	59979146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_59977100_59979100
Isoform_42269_37	chr13	-	3156	1	FSM	ENSMUSG00000052957.9	ENSMUST00000065086.6	2961	1	-195	0	-195	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGGTGCAGTTGCTTTC	NA	False	NA	NA	False	ATTAAA	-33	NA	60325374	60322218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_60322200_60325400
Isoform_4227_49	chr10	-	746	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	13	-98	0	95	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTGGGGACTCTCTT	NA	False	NA	87	True	ATTAAA	-5	NA	95337789	95316571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
Isoform_42282_3	chr13	-	2386	2	NNC	ENSMUSG00000052374.17	novel	1361	4	NA	NA	2	-30081	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	12355611	12353185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr13_-_12355448_12355487
Isoform_42290_12	chr13	+	177	1	Intergenic	novelGene_3118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62338209	62338386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62338200_62338400
Isoform_42292_6	chr13	-	190	1	Intergenic	novelGene_3119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAATTACTACATATAAA	2672	False	NA	NA	False	NA	NA	NA	62380550	62380360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_62380400_62380600
Isoform_42293_4	chr13	-	196	1	Intergenic	novelGene_3120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAGTAAGGGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	62400112	62399916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_62399900_62400100
Isoform_42294_65	chr13	-	172	1	Intergenic	novelGene_3121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTTTTAAAAATGGTT	NA	False	NA	NA	False	NA	NA	NA	62407359	62407187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_62407200_62407400
Isoform_42304_88	chr13	+	177	1	Intergenic	novelGene_3122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	62562119	62562296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62562100_62562300
Isoform_42309_159	chr13	+	175	1	Intergenic	novelGene_3123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	62647226	62647401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62647200_62647400
Isoform_42314_5	chr13	+	176	1	Intergenic	novelGene_3124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGTAT	NA	False	NA	NA	False	NA	NA	NA	62661184	62661360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62661200_62661400
Isoform_42315_3	chr13	-	2176	1	Genic_Genomic	ENSMUSG00000055228.9_ENSMUSG00000074865.12	novel	NA	NA	NA	NA	-2	-4219	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	62706451	62704275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_62704300_62706500
Isoform_42316_12	chr13	+	164	1	Intergenic	novelGene_3125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAATTTAGT	NA	False	NA	NA	False	NA	NA	NA	62708848	62709012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62708800_62709000
Isoform_42319_4	chr13	+	177	1	Intergenic	novelGene_3126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAATAAACAAGACA	NA	False	NA	NA	False	NA	NA	NA	62759576	62759753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62759600_62759800
Isoform_42320_71	chr18	-	171	1	Intergenic	novelGene_5399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4776	False	NA	NA	False	NA	NA	NA	38370776	38370605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_38370600_38370800
Isoform_42324_6	chr13	+	178	1	Antisense	novelGene_ENSMUSG00000113601.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62829776	62829954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_62829800_62830000
Isoform_42325_3	chr13	-	177	1	Intergenic	novelGene_3128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAAAAGCAGCCTTAT	NA	False	NA	NA	False	NA	NA	NA	62835805	62835628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_62835600_62835800
Isoform_42326_4	chr13	+	391	1	Intergenic	novelGene_3129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATGAA	NA	False	NA	NA	False	NA	NA	NA	62906108	62906499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62906100_62906500
Isoform_4233_40	chr10	-	3877	5	NIC	ENSMUSG00000062981.6	novel	661	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	2875	junction_4	535.975745719897	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337798	95316667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_95316840_95326107_95329578_95332685_95332750_95336244_95336385_95337767
Isoform_42330_8	chr13	+	176	1	Intergenic	novelGene_3131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAATCAGACACA	NA	False	NA	NA	False	NA	NA	NA	62987509	62987685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62987500_62987700
Isoform_42331_28	chr13	-	180	1	Intergenic	novelGene_3132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATATCCTGTGG	NA	False	NA	NA	False	NA	NA	NA	63033069	63032889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_63032900_63033100
Isoform_42333_11	chr13	-	174	1	Intergenic	novelGene_3133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	63385097	63384923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_63384900_63385100
Isoform_42336_23	chr13	+	1606	1	FSM	ENSMUSG00000021458.18	ENSMUST00000221108.2	1599	1	1	-8	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGCCTTGCTTAGAGG	NA	False	NA	34	True	AATAAA	-34	NA	63449087	63450693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_63449100_63450700
Isoform_42337_3	chr13	+	1715	1	FSM	ENSMUSG00000021458.18	ENSMUST00000221108.2	1599	1	1	-117	1	111	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTAGTCTGGTTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	63449087	63450802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_63449100_63450800
Isoform_42340_29	chr13	-	176	1	Intergenic	novelGene_3134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATATGACTGAGCC	NA	False	NA	NA	False	NA	NA	NA	63605473	63605297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_63605300_63605500
Isoform_42347_3	chr13	-	2362	1	Intergenic	novelGene_3135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	63710914	63708552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_63708600_63710900
Isoform_42348_41	chr13	+	168	1	Intergenic	novelGene_3136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTTAAAAATGCC	NA	False	NA	NA	False	NA	NA	NA	63763055	63763223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_63763100_63763200
Isoform_42349_13	chr13	-	175	1	Intergenic	novelGene_3137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATCACCTCTCAT	5655	False	NA	NA	False	NA	NA	NA	63809485	63809310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_63809300_63809500
Isoform_42350_3	chr13	-	580	1	Intergenic	novelGene_3139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAAAAAATAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	64116541	64115961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64116000_64116500
Isoform_42352_4	chr13	-	2703	1	Genic_Genomic	ENSMUSG00000097715.3	novel	NA	NA	NA	NA	-29	-26566	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12665306	12662603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_12662600_12665300
Isoform_42353_3	chr13	+	176	1	Intergenic	novelGene_3140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGAGTGGGGCCAGAG	1440	False	NA	NA	False	NA	NA	NA	64205446	64205622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_64205400_64205600
Isoform_42354_19	chr13	-	179	1	Intergenic	novelGene_3141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAGATGAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	64234743	64234564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64234600_64234700
Isoform_42355_13	chr13	+	154	1	Antisense	novelGene_ENSMUSG00000033114.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGATGGAGTA	NA	False	NA	NA	False	NA	NA	NA	64244427	64244581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_64244400_64244600
Isoform_42356_103	chr13	-	173	1	Intergenic	novelGene_3142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	64259786	64259613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64259600_64259800
Isoform_42358_3	chr13	-	243	1	Intergenic	novelGene_3143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGATATTCATGCCTTA	9487	False	NA	NA	False	AATAAA	-13	NA	64265549	64265306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64265300_64265500
Isoform_42359_7	chr13	-	6769	1	Genic_Genomic	ENSMUSG00000044934.14	novel	NA	NA	NA	NA	-16	-5982	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	6034	False	NA	NA	False	AATAAA	-8	NA	64301032	64294263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_64294300_64301000
Isoform_42362_23	chr13	+	2200	1	NIC	ENSMUSG00000021476.10	novel	4903	7	NA	NA	10	460	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGGTTTTATTTATTT	NA	False	NA	NA	False	AATAAA	-21	NA	64309692	64311892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_64309700_64311900
Isoform_42365_11	chr13	+	178	1	Intergenic	novelGene_3144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTAACAGGATTTC	861	False	NA	NA	False	NA	NA	NA	64371314	64371492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_64371300_64371500
Isoform_42366_5	chr13	-	204	1	Intergenic	novelGene_3145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGCTATATTAA	NA	False	NA	NA	False	NA	NA	NA	64374137	64373933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64373900_64374100
Isoform_42367_37	chr13	+	181	1	Intergenic	novelGene_3146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGCAGATTCTCA	NA	False	NA	NA	False	NA	NA	NA	64387571	64387752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_64387600_64387800
Isoform_42368_16	chr13	+	197	1	Genic_Genomic	ENSMUSG00000113816.2	novel	NA	NA	NA	NA	-184	-6950	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAACCAAAAAAAAACCGA	5935	False	NA	NA	False	NA	NA	NA	64438706	64438903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_+_64438700_64438900
Isoform_42370_82	chr13	+	172	1	Intergenic	novelGene_3147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAACAAAACAAA	8606	False	NA	NA	False	NA	NA	NA	64441377	64441549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_64441400_64441500
Isoform_42371_104	chr13	-	178	1	Antisense	novelGene_ENSMUSG00000113816.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTGCAACAAG	NA	False	NA	NA	False	NA	NA	NA	64444770	64444592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_64444600_64444800
Isoform_42372_39	chr11	+	169	1	Intergenic	novelGene_2064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97209529	97209698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97209500_97209700
Isoform_42373_21	chr13	+	171	1	Intergenic	novelGene_3149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTCTTTGTAAGCACA	NA	False	NA	NA	False	NA	NA	NA	64458894	64459065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_64458900_64459100
Isoform_42375_34	chr13	-	175	1	Intergenic	novelGene_3150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	64471586	64471411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64471400_64471600
Isoform_42376_3	chr13	+	180	1	Intergenic	novelGene_3151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGCCCATCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	64472878	64473058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_64472900_64473100
Isoform_42377_24	chr13	+	195	1	Intergenic	novelGene_2920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCATCCATTTCATCT	NA	False	NA	NA	False	NA	NA	NA	12789106	12789301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_12789100_12789300
Isoform_42378_4	chr13	-	179	1	Intergenic	novelGene_3152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAACTT	NA	False	NA	NA	False	NA	NA	NA	64476448	64476269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64476300_64476400
Isoform_42380_206	chr13	-	196	1	ISM	ENSMUSG00000021477.10	ENSMUST00000222517.2	6168	9	8843	2515	5008	1362	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	64509861	64509665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_64509700_64509900
Isoform_42386_3	chr13	-	189	1	Intergenic	novelGene_3153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTGGGGCTGGTGAG	NA	False	NA	NA	False	NA	NA	NA	64541839	64541650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64541600_64541800
Isoform_42392_4	chr13	-	157	1	Intergenic	novelGene_3154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	64724780	64724623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_64724600_64724800
Isoform_42393_29	chr13	+	177	1	Intergenic	novelGene_2921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	13154094	13154271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_13154100_13154300
Isoform_42394_15	chr13	+	173	1	Intergenic	novelGene_3155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTGCCATG	NA	False	NA	NA	False	NA	NA	NA	65179358	65179531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_65179400_65179500
Isoform_42396_4	chr13	-	1176	1	FSM	ENSMUSG00000061724.6	ENSMUST00000074863.6	733	1	262	-705	262	705	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGCCTACCTCCAATAG	NA	False	NA	NA	False	AATAAA	-40	NA	13407216	13406040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_13406000_13407200
Isoform_42400_4	chr13	-	176	1	Intergenic	novelGene_3156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	65310408	65310232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_65310200_65310400
Isoform_42401_16	chr13	+	176	1	Intergenic	novelGene_3157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGCAT	NA	False	NA	NA	False	NA	NA	NA	65352221	65352397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_65352200_65352400
Isoform_42402_6	chr13	-	177	1	Intergenic	novelGene_3158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAATTAACA	NA	False	NA	NA	False	NA	NA	NA	65418833	65418656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_65418700_65418800
Isoform_42405_6	chr13	+	4219	1	Intergenic	novelGene_3159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	65457199	65461418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_65457200_65461400
Isoform_42406_76	chr13	+	193	1	Intergenic	novelGene_3160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTACTAGAGAATTCAC	NA	False	NA	NA	False	NA	NA	NA	65521804	65521997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_65521800_65522000
Isoform_42408_4	chr13	-	246	1	Intergenic	novelGene_3161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGGTGGCATAAACCAG	NA	False	NA	NA	False	NA	NA	NA	65625505	65625259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_65625300_65625500
Isoform_42409_100	chr13	+	172	1	Intergenic	novelGene_3127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	62764592	62764764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62764600_62764800
Isoform_4241_592	chr10	-	3220	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	0	-10	0	10	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGTTTAAGAAGAGCC	NA	False	NA	-11	True	AATAAA	-26	NA	95400008	95382858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
Isoform_42411_22	chr13	+	182	1	Intergenic	novelGene_3162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGTTAAATATAAA	NA	False	NA	NA	False	NA	NA	NA	65883517	65883699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_65883500_65883700
Isoform_42412_25	chr13	-	173	1	Intergenic	novelGene_3163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	66007683	66007510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_66007500_66007700
Isoform_42413_47	chr13	-	192	1	Intergenic	novelGene_3164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTACTAGAGAATTCA	9371	False	NA	NA	False	NA	NA	NA	66018116	66017924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_66017900_66018100
Isoform_42414_8	chr13	-	2651	1	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	-8	-25821	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13568188	13565537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_13565500_13568200
Isoform_42416_93	chr13	+	228	1	Intergenic	novelGene_3165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGAACCATATGGTTAT	NA	False	NA	NA	False	NA	NA	NA	66043574	66043802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_66043600_66043800
Isoform_42418_18	chr13	-	205	1	Intergenic	novelGene_2922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	342	False	NA	NA	False	NA	NA	NA	13589786	13589581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_13589600_13589800
Isoform_4242_110	chr10	-	3286	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	-85	9	-85	-9	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACCTCTGTATGTTTAT	NA	False	NA	-30	True	AATAAA	-7	NA	95400093	95382877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
Isoform_42420_5	chr13	-	692	1	Intergenic	novelGene_3166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCACTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	66175285	66174593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_66174600_66175300
Isoform_42425_5	chr13	-	225	1	Intergenic	novelGene_3167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTGTTT	7501	False	NA	NA	False	AAAACA	-32	NA	66394373	66394148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_66394100_66394400
Isoform_42426_3	chr13	+	995	1	Intergenic	novelGene_3168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATATAAATGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66395992	66396987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_66396000_66397000
Isoform_42430_3	chr13	+	196	1	Intergenic	novelGene_3169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTTTTTAAAT	8601	False	NA	NA	False	NA	NA	NA	66597777	66597973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_66597800_66598000
Isoform_42434_5	chr13	-	180	1	Intergenic	novelGene_3170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66728363	66728183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_66728200_66728400
Isoform_42454_3	chr13	-	171	1	Intergenic	novelGene_3171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTAAAAAAAATATTGGA	8856	False	NA	NA	False	NA	NA	NA	66744034	66743863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_66743900_66744000
Isoform_42457_3	chr13	+	2424	1	NIC	ENSMUSG00000114327.2	novel	818	2	NA	NA	25449	-131	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAAGATGGTCGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	66854466	66856890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_66854500_66856900
Isoform_42458_11	chr13	-	236	1	Intergenic	novelGene_3174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGGTGGCATAAACCAG	NA	False	NA	NA	False	NA	NA	NA	66885785	66885549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_66885500_66885800
Isoform_42459_8	chr13	+	155	1	Intergenic	novelGene_2898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACAATAGGAATCA	NA	False	NA	NA	False	NA	NA	NA	3648062	3648217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_3648100_3648200
Isoform_42460_4	chr13	+	5132	1	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66901195	66906327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_66901200_66906300
Isoform_42461_6	chr13	-	179	1	Intergenic	novelGene_2923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGCAAATGCT	NA	False	NA	NA	False	NA	NA	NA	13837033	13836854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_13836900_13837000
Isoform_42462_82	chr13	-	219	1	Intergenic	novelGene_3175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTGAACCATATGGTTA	NA	False	NA	NA	False	NA	NA	NA	67011599	67011380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_67011400_67011600
Isoform_42463_33	chr13	-	174	1	Intergenic	novelGene_2924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	13850046	13849872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_13849900_13850000
Isoform_42467_3	chr13	+	195	1	Antisense	novelGene_ENSMUSG00000021519.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTATCAGCTGGGCAT	5593	False	NA	NA	False	NA	NA	NA	67078628	67078823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_67078600_67078800
Isoform_42468_25	chr13	-	176	1	Intergenic	novelGene_3176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGTAAAAAAAAAA	8063	False	NA	NA	False	NA	NA	NA	67100514	67100338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_67100300_67100500
Isoform_42471_16	chr13	-	178	1	Intergenic	novelGene_3177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTCTCAACTGTA	NA	False	NA	NA	False	NA	NA	NA	67322307	67322129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_67322100_67322300
Isoform_42473_113	chr13	+	178	1	Intergenic	novelGene_3178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	67377045	67377223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_67377000_67377200
Isoform_42477_6	chr13	+	200	1	FSM	ENSMUSG00000103398.2	ENSMUST00000195630.2	1840	1	1639	1	1639	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAGATATGTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	67601415	67601615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_67601400_67601600
Isoform_42478_3	chr13	-	602	1	NIC	ENSMUSG00000071291.11	novel	2300	4	NA	NA	0	-8040	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAGAAAAAAATCAGAGAC	NA	False	NA	NA	False	ATTAAA	-4	NA	67648622	67648020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_67648000_67648600
Isoform_42485_5	chr13	-	1291	2	Genic_Genomic	ENSMUSG00000058093.14	novel	4835	4	NA	NA	8	-14931	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	67757798	67756478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_67756867_67756895
Isoform_42486_9	chr13	-	185	1	Intergenic	novelGene_3179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACACAAA	NA	False	NA	NA	False	NA	NA	NA	67804454	67804269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_67804300_67804500
Isoform_42487_197	chr5	-	172	1	Intergenic	novelGene_9172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACAT	4526	False	NA	NA	False	NA	NA	NA	150589988	150589816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_150589800_150590000
Isoform_42489_38	chr13	-	180	1	ISM	ENSMUSG00000052909.9	ENSMUST00000171257.4	2904	3	10420	138	10420	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67911150	67910970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_-_67911000_67911200
Isoform_42491_5	chr13	-	168	1	Intergenic	novelGene_3180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAAGTCCGGTTTTCG	NA	False	NA	NA	False	NA	NA	NA	67946745	67946577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_67946600_67946700
Isoform_42497_40	chr13	-	176	1	Intergenic	novelGene_3182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	68582714	68582538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_68582500_68582700
Isoform_42498_39	chr13	+	178	1	Intergenic	novelGene_3181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	68340069	68340247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_68340100_68340200
Isoform_42500_23	chr13	+	175	1	Intergenic	novelGene_3183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGTACATGCTT	NA	False	NA	NA	False	NA	NA	NA	69287298	69287473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_69287300_69287500
Isoform_42501_22	chr13	+	178	1	Intergenic	novelGene_3184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTTAAAAAAAAATAATTA	631	False	NA	NA	False	NA	NA	NA	69612901	69613079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_69612900_69613100
Isoform_42502_156	chr13	+	176	1	Intergenic	novelGene_3185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAAGTTTTGATTCT	NA	False	NA	NA	False	NA	NA	NA	69719673	69719849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_69719700_69719800
Isoform_42503_4	chr13	-	1082	1	Genic_Genomic	ENSMUSG00000021594.12_ENSMUSG00000091133.2	novel	NA	NA	NA	NA	-47	90	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATGTCTCTATATCTA	NA	False	NA	NA	False	ATTAAA	-7	NA	69759608	69758526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_69758500_69759600
Isoform_42506_5	chr13	+	219	1	Intergenic	novelGene_3186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTAGGAATACTTCTT	6709	False	NA	NA	False	AATAAA	-20	NA	69809106	69809325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_69809100_69809300
Isoform_42507_7	chr13	-	176	1	Intergenic	novelGene_3187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGGCAGTGGCTGG	NA	False	NA	NA	False	NA	NA	NA	69895482	69895306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_69895300_69895500
Isoform_42510_256	chr1	+	177	1	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52730566	52730743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_52730600_52730700
Isoform_42511_184	chr19	-	684	1	FSM	ENSMUSG00000062456.5	ENSMUST00000078034.5	714	1	11	19	11	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	32443967	32443283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_32443300_32444000
Isoform_42514_6	chr13	-	425	1	FSM	ENSMUSG00000094989.2	ENSMUST00000075549.8	579	1	242	-88	242	88	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	72603217	72602792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_72602800_72603200
Isoform_42518_14	chr13	-	177	1	Intergenic	novelGene_3188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATATACATTC	NA	False	NA	NA	False	NA	NA	NA	72935624	72935447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_72935400_72935600
Isoform_42521_5	chr13	-	160	1	Intergenic	novelGene_3189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	73604935	73604775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_73604800_73604900
Isoform_4253_223	chr10	-	3209	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_2	214.72307747422	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTTTATTTTTA	NA	False	NA	-25	True	AATAAA	-12	NA	95400008	95382872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523
Isoform_42532_4	chr13	-	575	1	Antisense	novelGene_ENSMUSG00000021608.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAATGAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73664533	73663958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_73664000_73664500
Isoform_42534_18	chr13	+	177	1	Intergenic	novelGene_3190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATAATGTGATTA	NA	False	NA	NA	False	NA	NA	NA	73748575	73748752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_73748600_73748800
Isoform_42535_6	chr13	+	176	1	Intergenic	novelGene_3191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	5123	False	NA	NA	False	NA	NA	NA	73768844	73769020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_73768800_73769000
Isoform_42537_11	chr13	+	176	1	Intergenic	novelGene_3192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAACAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	73863632	73863808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_73863600_73863800
Isoform_42538_4	chr13	+	154	1	Intergenic	novelGene_3193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGAAAGCTCTTCG	NA	False	NA	NA	False	NA	NA	NA	73908728	73908882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_73908700_73908900
Isoform_42539_24	chr13	+	174	1	Intergenic	novelGene_3194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	73908904	73909078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_73908900_73909100
Isoform_4254_50	chr10	-	3246	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-42	-9	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_2	214.72307747422	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACCTCTGTATGTTTAT	NA	False	NA	-30	True	AATAAA	-7	NA	95400050	95382877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523
Isoform_42540_15	chr13	+	180	1	Antisense	novelGene_ENSMUSG00000021302.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	14228006	14228186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_14228000_14228200
Isoform_42555_19	chr13	-	175	1	Intergenic	novelGene_3195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	74208754	74208579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_74208600_74208800
Isoform_42560_8	chr13	+	176	1	Intergenic	novelGene_3196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGGTTACTTTTAA	573	False	NA	NA	False	NA	NA	NA	74494650	74494826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_74494600_74494800
Isoform_42562_16	chr13	-	1878	1	NIC	ENSMUSG00000021302.11	novel	4244	4	NA	NA	6	-2426	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14237988	14236110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_14236100_14238000
Isoform_42564_4	chr13	+	174	1	Intergenic	novelGene_3197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAATTAAAAAAACAAAACA	6	True	NA	NA	False	NA	NA	NA	74546571	74546745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_74546600_74546700
Isoform_42565_3	chr13	+	3679	1	Genic_Genomic	ENSMUSG00000062382.10	novel	NA	NA	NA	NA	-11	-3334	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	1236	False	NA	NA	False	NA	NA	NA	74547801	74551480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_+_74547800_74551500
Isoform_42566_40573	chr13	+	921	1	FSM	ENSMUSG00000062382.10	ENSMUST00000222435.2	938	1	-11	28	-11	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	40573	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAACAAAA	7951	False	NA	NA	False	NA	NA	NA	74554516	74555437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_74554500_74555400
Isoform_42576_82	chr13	-	171	1	Intergenic	novelGene_2926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGCTTCAATTTT	NA	False	NA	-4	True	NA	NA	NA	14246734	14246563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_14246600_14246700
Isoform_42577_40	chr13	-	184	1	Intergenic	novelGene_3198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAGATAATC	NA	False	NA	NA	False	NA	NA	NA	74675086	74674902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_74674900_74675100
Isoform_42579_3	chr13	+	158	1	Antisense	novelGene_ENSMUSG00000113047.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	74706594	74706752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_74706600_74706800
Isoform_42580_7	chr13	+	180	1	Intergenic	novelGene_3199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATAGCAG	NA	False	NA	NA	False	NA	NA	NA	74709767	74709947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_74709800_74709900
Isoform_42581_3	chr13	-	1704	1	NIC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	32	-4628	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	4858	False	NA	NA	False	NA	NA	NA	74765789	74764085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_74764100_74765800
Isoform_42582_91	chr13	+	175	1	Intergenic	novelGene_3200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTGC	NA	False	NA	NA	False	NA	NA	NA	74942941	74943116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_74942900_74943100
Isoform_42583_6	chr13	-	180	1	Intergenic	novelGene_3201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	75003348	75003168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_75003200_75003300
Isoform_42592_6	chr13	+	174	1	Intergenic	novelGene_2927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGACAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	14391219	14391393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_14391200_14391400
Isoform_42594_61	chr13	-	178	1	Intergenic	novelGene_3202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAAAACCTGC	NA	False	NA	NA	False	NA	NA	NA	75970634	75970456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_75970500_75970600
Isoform_42598_10	chr13	+	413	1	FSM	ENSMUSG00000061833.7	ENSMUST00000073790.7	878	1	509	-44	509	44	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGTAAC	2884	False	NA	NA	False	AATAAA	-18	NA	76102763	76103176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_76102800_76103200
Isoform_4260_20	chr10	-	6068	15	NIC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	29.291288668079	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATTGTCTTGTGATG	NA	False	NA	0	True	ATTAAA	-22	NA	100323213	100279764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100320912_100320988_100323023
Isoform_42601_14	chr13	+	180	1	Intergenic	novelGene_3204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	76377349	76377529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_76377300_76377500
Isoform_42602_14	chr13	+	162	1	Intergenic	novelGene_3205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATTAATTAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	76640976	76641138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_76641000_76641100
Isoform_42605_8	chr13	-	197	1	Intergenic	novelGene_3206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCACTGTTTATTGAT	NA	False	NA	NA	False	NA	NA	NA	79466824	79466627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_79466600_79466800
Isoform_42610_9	chr13	+	4985	1	Intergenic	novelGene_3207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	80849207	80854192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_80849200_80854200
Isoform_42612_7	chr13	+	3622	2	Intergenic	novelGene_3208	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	80850543	80854187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_80852656_80852677
Isoform_42613_8	chr19	-	3578	4	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	22703679	22699840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_22700552_22700765_22700901_22700925_22701566_22701587
Isoform_42615_33	chr13	+	3375	2	Intergenic	novelGene_3209	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	80850794	80854191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_80852656_80852677
Isoform_42616_67	chr13	+	3175	2	Intergenic	novelGene_3210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	80850991	80854188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_80852656_80852677
Isoform_4263_139	chr10	-	5959	14	FSM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	34	0	10	0	multi-exon	FALSE	canonical	3	57	junction_8	14.4496677957759	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGATTGTCTTGTGATGT	NA	False	NA	1	True	ATTAAA	-23	NA	100323178	100279763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
Isoform_42639_10	chr13	+	1836	1	NIC	ENSMUSG00000074794.11	novel	2784	2	NA	NA	2	-4396	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTTTTTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81031530	81033366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_81031500_81033400
Isoform_42642_7	chr13	+	856	1	FSM	ENSMUSG00000043889.7	ENSMUST00000082300.5	1117	1	960	-699	960	699	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	81213762	81214618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_81213800_81214600
Isoform_42643_7	chr13	+	183	1	Intergenic	novelGene_3211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTTATTGTCAC	NA	False	NA	NA	False	NA	NA	NA	81615487	81615670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_81615500_81615700
Isoform_42644_4	chr11	+	170	1	Intergenic	novelGene_1739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75164899	75165069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75164900_75165100
Isoform_42645_6	chr13	+	4711	1	Intergenic	novelGene_3214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	585	False	NA	NA	False	NA	NA	NA	81784759	81789470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_81784800_81789500
Isoform_42646_3	chr13	-	563	1	Intergenic	novelGene_3215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAGA	NA	False	NA	NA	False	NA	NA	NA	81792400	81791837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_81791800_81792400
Isoform_4265_63	chr10	-	2343	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	151	70	4	-70	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTTTGTCTGATTT	NA	False	NA	-1	True	AATAAA	-14	NA	100425106	100408196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
Isoform_42651_70	chr13	+	176	1	Intergenic	novelGene_3216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	81843288	81843464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_81843300_81843500
Isoform_42652_3	chr13	+	1396	1	Genic_Genomic	ENSMUSG00000051098.7	novel	NA	NA	NA	NA	-237	-37847	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGCTTG	NA	False	NA	NA	False	NA	NA	NA	81859222	81860618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_+_81859200_81860600
Isoform_42654_6	chr13	+	186	1	Intergenic	novelGene_3217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAGATAACCTTACT	NA	False	NA	NA	False	NA	NA	NA	81895259	81895445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_81895300_81895400
Isoform_42655_28	chr13	-	177	1	Intergenic	novelGene_3218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAATGGCATGT	NA	False	NA	NA	False	NA	NA	NA	81954912	81954735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_81954700_81954900
Isoform_42657_6	chr13	-	176	1	Intergenic	novelGene_3220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAATAAAATAACA	NA	False	NA	NA	False	NA	NA	NA	82545278	82545102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_82545100_82545300
Isoform_42658_202	chr13	+	226	1	Intergenic	novelGene_3221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCCAGGAATCCAACAC	NA	False	NA	NA	False	NA	NA	NA	83064776	83065002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_83064800_83065000
Isoform_42659_4	chr13	-	1434	1	Genic_Genomic	ENSMUSG00000033799.11	novel	NA	NA	NA	NA	-116	-12921	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACACGAATAT	NA	False	NA	NA	False	NA	NA	NA	3661224	3659790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_3659800_3661200
Isoform_42661_6	chr2	-	171	1	Intergenic	novelGene_6269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8001	False	NA	NA	False	NA	NA	NA	68225036	68224865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_68224900_68225000
Isoform_42666_105	chr13	-	179	1	Intergenic	novelGene_3223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTATTCAAT	NA	False	NA	NA	False	NA	NA	NA	86266107	86265928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_86265900_86266100
Isoform_42669_3	chr13	-	173	1	Intergenic	novelGene_3224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATCAGAGACCTA	NA	False	NA	NA	False	NA	NA	NA	88912347	88912174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_88912200_88912300
Isoform_4267_19	chr10	-	2396	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	160	8	0	-8	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAGTGTGAAATAAA	NA	False	NA	61	True	AATAAA	-17	NA	100425097	100408134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
Isoform_42670_5	chr13	+	178	1	Intergenic	novelGene_3225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGAAAGTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	89634709	89634887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_89634700_89634900
Isoform_42678_8	chr11	+	158	1	Intergenic	novelGene_2000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	94198161	94198319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_94198200_94198300
Isoform_42679_103	chr13	+	179	1	Intergenic	novelGene_3228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACCTATGA	NA	False	NA	NA	False	NA	NA	NA	91005602	91005781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_91005600_91005800
Isoform_4268_4	chr10	-	2052	13	NIC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	6	4	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	44.608404165832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATAGTGTTTTCATT	NA	False	NA	NA	False	AATAAA	-13	NA	105677226	105599111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105671987_105672082_105676936
Isoform_42683_9	chr13	+	176	1	Intergenic	novelGene_3229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAATGTACTTC	NA	False	NA	NA	False	NA	NA	NA	91348893	91349069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_91348900_91349100
Isoform_42685_142	chr13	+	179	1	Intergenic	novelGene_3230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATGTAGA	NA	False	NA	NA	False	NA	NA	NA	91400337	91400516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_91400300_91400500
Isoform_42686_72	chr13	-	180	1	Intergenic	novelGene_3231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTAAGACAACTGC	NA	False	NA	0	True	NA	NA	NA	91665234	91665054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_91665100_91665200
Isoform_42687_3	chr13	-	185	1	Intergenic	novelGene_3232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATGTGCCTAGCAG	NA	False	NA	NA	False	NA	NA	NA	91935608	91935423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_91935400_91935600
Isoform_42688_97	chr13	-	178	1	Intergenic	novelGene_3233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGAAGGG	NA	False	NA	-46	True	NA	NA	NA	92005635	92005457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_92005500_92005600
Isoform_42689_172	chr13	+	197	1	Intergenic	novelGene_3234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	6854	False	NA	NA	False	NA	NA	NA	92618027	92618224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_92618000_92618200
Isoform_4269_109	chr10	-	1973	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	-1	61	1	5	multi-exon	FALSE	canonical	3	65	junction_11	25.2121576340063	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATAGTGTTTTCATTC	NA	False	NA	NA	False	AATAAA	-14	NA	105677240	105599110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
Isoform_42691_228	chr13	+	178	1	Intergenic	novelGene_3235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAAAAATCCAGTC	NA	False	NA	NA	False	NA	NA	NA	92741926	92742104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_92741900_92742100
Isoform_42692_32	chr13	+	176	1	Intergenic	novelGene_3236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5601	False	NA	NA	False	NA	NA	NA	92780625	92780801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_92780600_92780800
Isoform_42696_3	chr13	-	216	1	Intergenic	novelGene_3238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGGAATAATTCCAGATG	NA	False	NA	NA	False	NA	NA	NA	93333364	93333148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_93333100_93333400
Isoform_42697_27	chr13	+	175	1	Intergenic	novelGene_3239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93402846	93403021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_93402800_93403000
Isoform_42698_3	chr13	+	3085	1	NIC	ENSMUSG00000007617.19	novel	2468	6	NA	NA	-8	-34734	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATTAAAAATGA	NA	False	NA	NA	False	TTTAAA	-10	NA	93440601	93443686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_93440600_93443700
Isoform_42699_9	chr13	+	171	1	Intergenic	novelGene_3240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGGACAGGCTT	NA	False	NA	NA	False	NA	NA	NA	93700060	93700231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_93700100_93700200
Isoform_4270_13	chr10	-	2018	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	9	6	2	-6	multi-exon	FALSE	canonical	3	65	junction_11	25.2121576340063	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTATGATCAATGTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105677230	105599055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
Isoform_42700_3	chr13	-	177	1	Intergenic	novelGene_3241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCAAAGGC	NA	False	NA	NA	False	NA	NA	NA	93713997	93713820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_93713800_93714000
Isoform_42701_254	chr13	+	171	1	Intergenic	novelGene_3242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	93751466	93751637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_93751500_93751600
Isoform_42703_49	chr13	+	178	1	Intergenic	novelGene_3243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCAGTATTATA	NA	False	NA	NA	False	NA	NA	NA	93766577	93766755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_93766600_93766800
Isoform_42705_6	chr13	-	2041	1	Intergenic	novelGene_3244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94301390	94299349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_94299300_94301400
Isoform_42709_17	chr13	+	185	1	Intergenic	novelGene_3245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGGTAAATTTC	NA	False	NA	NA	False	NA	NA	NA	94440459	94440644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_94440500_94440600
Isoform_4271_21	chr10	-	4489	17	NIC	ENSMUSG00000035798.15	novel	3635	17	NA	NA	-6	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	8.47030659126339	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTGTCTGCTCAGT	NA	False	NA	-3	True	AATAAA	-12	NA	110845870	110777642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110803544_110803708_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
Isoform_42710_3	chr13	-	2149	1	FSM	ENSMUSG00000042857.4	ENSMUST00000221110.2	2177	1	17	11	17	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATAAAATTTTCTCTC	NA	False	NA	NA	False	TATAAA	-17	NA	94495414	94493265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_94493300_94495400
Isoform_42712_13	chr13	-	237	1	Intergenic	novelGene_3246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94556104	94555867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_94555900_94556100
Isoform_42713_5	chr13	-	3455	2	Antisense	novelGene_ENSMUSG00000021686.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94637951	94634465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_94636059_94636089
Isoform_42714_7	chr13	-	168	1	Intergenic	novelGene_3247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAAGTGTTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	94754369	94754201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_94754200_94754400
Isoform_42717_30	chr13	-	199	1	Intergenic	novelGene_3248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAACAACAAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	94951173	94950974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_94951000_94951200
Isoform_42718_4	chr2	-	173	1	Intergenic	novelGene_6779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATCTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	166850081	166849908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_166849900_166850100
Isoform_42719_5	chr13	+	158	1	Intergenic	novelGene_3249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAAACACACA	NA	False	NA	NA	False	NA	NA	NA	95485598	95485756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_95485600_95485800
Isoform_42720_22	chr13	+	238	1	Intergenic	novelGene_2928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAATTAGAGATGAA	NA	False	NA	NA	False	NA	NA	NA	17733654	17733892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_17733700_17733900
Isoform_42722_4	chr13	-	1190	1	NIC	ENSMUSG00000021678.10	novel	2741	2	NA	NA	2	-12304	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAACTTAAAAAAAAAGTG	9828	False	NA	NA	False	TTTAAA	-35	NA	95661733	95660543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_95660500_95661700
Isoform_42723_239	chr13	+	178	1	Intergenic	novelGene_3250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAACAGAATT	NA	False	NA	NA	False	NA	NA	NA	95665200	95665378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_95665200_95665400
Isoform_42724_3	chr13	-	2109	2	Antisense	novelGene_ENSMUSG00000113359.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTCAGCACAAATACACAC	5032	False	NA	NA	False	NA	NA	NA	95680813	95678668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_95680057_95680092
Isoform_42725_6	chr13	+	206	1	Intergenic	novelGene_3251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAATTGCTTTAGT	9354	False	NA	NA	False	NA	NA	NA	95706309	95706515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_95706300_95706500
Isoform_42728_10	chr13	+	1117	1	Intergenic	novelGene_3252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7931	False	NA	NA	False	NA	NA	NA	96019450	96020567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_96019400_96020600
Isoform_42729_3	chr13	-	2854	2	Genic_Genomic	ENSMUSG00000021676.11	novel	5847	36	NA	NA	-16	-142670	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAACAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	96028519	96025627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_96027092_96027129
Isoform_42732_5	chr13	-	2143	1	FSM	ENSMUSG00000114133.2	ENSMUST00000220449.2	2161	1	1	17	1	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	96217883	96215740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_96215700_96217900
Isoform_42733_5	chr13	-	921	1	FSM	ENSMUSG00000114133.2	ENSMUST00000220449.2	2161	1	1	1239	1	-1239	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTTTTTTCCTAACAA	NA	False	NA	NA	False	AATAAA	-19	NA	96217883	96216962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_96217000_96217900
Isoform_42734_498	chr13	-	176	1	Intergenic	novelGene_3253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	498	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGG	NA	False	NA	NA	False	NA	NA	NA	96598221	96598045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_96598000_96598200
Isoform_42736_5	chr13	+	1904	1	FSM	ENSMUSG00000012429.10	ENSMUST00000222292.2	4316	1	-3	2415	-3	77	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGATTTTTGTGAAT	NA	False	NA	16	True	AATAAA	-17	NA	17870014	17871918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_17870000_17871900
Isoform_42737_3	chr13	-	854	1	NIC	ENSMUSG00000021668.16	novel	1089	3	NA	NA	-27	-25577	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	96679020	96678166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_96678200_96679000
Isoform_42739_6	chr13	-	178	1	Intergenic	novelGene_3254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTCAGAAGC	NA	False	NA	NA	False	NA	NA	NA	96697844	96697666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_96697700_96697800
Isoform_42740_10	chr13	+	172	1	Intergenic	novelGene_3255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATCCTAGAGAA	NA	False	NA	NA	False	NA	NA	NA	96779002	96779174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_96779000_96779200
Isoform_42744_3	chr13	-	1739	1	Intergenic	novelGene_2929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAACATCATTAAACCAA	NA	False	NA	NA	False	TTTAAA	-34	NA	17876647	17874908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_17874900_17876600
Isoform_42746_5	chr13	+	167	1	Intergenic	novelGene_3256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	96824182	96824349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_96824200_96824300
Isoform_42747_4	chr13	-	3741	1	Intergenic	novelGene_3257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTACTTGTAGGGTCAG	NA	False	NA	NA	False	AATAAA	-13	NA	96830419	96826678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_96826700_96830400
Isoform_42748_5	chr13	+	173	1	Intergenic	novelGene_3258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGTGGTGATGGAA	NA	False	NA	NA	False	NA	NA	NA	96875817	96875990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_96875800_96876000
Isoform_42749_54	chr13	-	183	1	Intergenic	novelGene_3259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGGATGAAGTA	NA	False	NA	NA	False	NA	NA	NA	96901434	96901251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_96901300_96901400
Isoform_42751_9	chr13	-	176	1	Intergenic	novelGene_3260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGATT	5386	False	NA	NA	False	NA	NA	NA	97132546	97132370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_97132400_97132500
Isoform_42752_9	chr13	+	174	1	Intergenic	novelGene_3261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	2019	False	NA	NA	False	NA	NA	NA	97140009	97140183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_97140000_97140200
Isoform_42753_260	chr13	+	176	1	Intergenic	novelGene_3262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTTTTTTTTTAAAAAA	NA	False	NA	11	True	NA	NA	NA	97150532	97150708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_97150500_97150700
Isoform_42758_40	chr2	+	177	1	Intergenic	novelGene_6449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8330	False	NA	NA	False	NA	NA	NA	103447721	103447898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_103447700_103447900
Isoform_42772_23	chr13	-	186	1	Intergenic	novelGene_3263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAGAAAGAA	NA	False	NA	-1	True	NA	NA	NA	97298429	97298243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_97298200_97298400
Isoform_42773_12	chr13	+	179	1	Intergenic	novelGene_2931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAAGAAGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	17922837	17923016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_17922800_17923000
Isoform_42776_16	chr13	+	189	1	Intergenic	novelGene_3264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATGTTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97367749	97367938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_97367700_97367900
Isoform_42777_11	chr13	-	178	1	Intergenic	novelGene_3265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	97369549	97369371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_97369400_97369500
Isoform_42779_13	chr13	+	174	1	Intergenic	novelGene_3266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	97433095	97433269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_97433100_97433300
Isoform_42781_51	chr13	+	205	1	Intergenic	novelGene_3267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	97526557	97526762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_97526600_97526800
Isoform_42782_62	chr13	+	173	1	Intergenic	novelGene_3268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTAAATTGCCCT	NA	False	NA	NA	False	NA	NA	NA	97553147	97553320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_97553100_97553300
Isoform_4280_478	chr10	-	3124	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	42	586	42	-586	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTTTTCAGTTACA	NA	False	NA	-1	True	ATTAAA	-15	NA	115087330	115034362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
Isoform_42803_3	chr13	+	2300	1	Genic_Genomic	ENSMUSG00000114926.2	novel	NA	NA	NA	NA	-257	-2484	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGCCATGGTTTGTTCT	NA	False	NA	12	True	NA	NA	NA	97647454	97649754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_+_97647500_97649800
Isoform_42804_508	chr13	-	178	1	Intergenic	novelGene_3269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	508	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	97661369	97661191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_97661200_97661400
Isoform_42805_3	chr13	+	298	1	Intergenic	novelGene_3270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	TTTAAA	-11	NA	97726478	97726776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_97726500_97726800
Isoform_42807_11	chr13	-	179	1	Intergenic	novelGene_3271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAGAATAAGA	7299	False	NA	NA	False	NA	NA	NA	97753333	97753154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_97753200_97753300
Isoform_42809_4	chr13	-	276	1	Intergenic	novelGene_3272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAATTATTCTGCAGTA	NA	False	NA	NA	False	TATAAA	-6	NA	97848891	97848615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_97848600_97848900
Isoform_42815_5	chr13	+	177	1	Intergenic	novelGene_3273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGACAACAGAGGA	NA	False	NA	NA	False	NA	NA	NA	97999629	97999806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_97999600_97999800
Isoform_4282_99	chr10	-	3147	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	19	586	19	-586	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTTTTCAGTTACA	NA	False	NA	-1	True	ATTAAA	-15	NA	115087353	115034362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
Isoform_42823_20	chr13	+	2461	1	FSM	ENSMUSG00000078302.6	ENSMUST00000105098.6	5064	1	2	2601	2	-2601	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATTGGCTGAATTGTCC	NA	False	NA	NA	False	AATAAA	-30	NA	98490751	98493212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_98490800_98493200
Isoform_42824_13	chr13	-	183	1	Intergenic	novelGene_3274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTGACAG	7457	False	NA	NA	False	NA	NA	NA	98543316	98543133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_98543100_98543300
Isoform_42826_212	chr13	+	173	1	Intergenic	novelGene_3275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAAGGCTTGTG	6571	False	NA	NA	False	NA	NA	NA	98698884	98699057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_98698900_98699100
Isoform_4283_22	chr10	-	4569	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	42	-859	42	859	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGGTCTGCATTATC	NA	False	NA	NA	False	ATTAAA	-21	NA	115087330	115032917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
Isoform_42833_9	chr13	+	285	1	Genic_Genomic	ENSMUSG00000114458.2	novel	NA	NA	NA	NA	2389	109	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAGGAATTAAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	98940068	98940353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_+_98940100_98940400
Isoform_42834_3	chr13	+	171	1	Intergenic	novelGene_3276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATTGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	98943135	98943306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_98943100_98943300
Isoform_42835_5	chr13	+	173	1	Intergenic	novelGene_3277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98964482	98964655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_98964500_98964700
Isoform_42884_5	chr13	+	3463	1	Antisense	novelGene_ENSMUSG00000009470.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACTAAAAAAAAAAAAAAAA	2181	False	NA	NA	False	AAGAAA	-13	NA	98979850	98983313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_98979800_98983300
Isoform_42886_7	chr13	+	3555	1	Intergenic	novelGene_3278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	99042327	99045882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_99042300_99045900
Isoform_42888_6	chr13	-	1902	1	NIC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	36	-48775	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAAAGAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	99062826	99060924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_99060900_99062800
Isoform_42890_146	chr13	+	171	1	Intergenic	novelGene_3279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	99149882	99150053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_99149900_99150100
Isoform_42891_6	chr13	+	3402	1	Antisense	novelGene_ENSMUSG00000052727.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTACATGTGTTCCC	6605	False	NA	NA	False	NA	NA	NA	99557547	99560949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_99557500_99560900
Isoform_42897_73	chr13	+	214	1	Intergenic	novelGene_3280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGTACTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99967180	99967394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_99967200_99967400
Isoform_42899_4	chr13	+	156	1	Intergenic	novelGene_3281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGGAAATTGTGTTAT	7491	False	NA	NA	False	NA	NA	NA	100135426	100135582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100135400_100135600
Isoform_42900_3	chr13	+	276	1	Intergenic	novelGene_3282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACGAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100186932	100187208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100186900_100187200
Isoform_42903_7	chr13	+	176	1	Intergenic	novelGene_3283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTGCCTTACATT	NA	False	NA	NA	False	NA	NA	NA	100644371	100644547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100644400_100644500
Isoform_42904_4	chr13	+	1881	1	FSM	ENSMUSG00000113750.2	ENSMUST00000222318.2	1049	1	-214	-618	-214	618	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTAGTGCTGTTTCTATG	NA	False	NA	NA	False	NA	NA	NA	18124278	18126159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_18124300_18126200
Isoform_42905_3	chr13	+	1850	1	FSM	ENSMUSG00000113750.2	ENSMUST00000222318.2	1049	1	-260	-541	-260	541	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTCCAACTCCTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	18124232	18126082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_18124200_18126100
Isoform_42906_52	chr8	-	178	1	Intergenic	novelGene_10621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	41783224	41783046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_41783000_41783200
Isoform_42908_8	chr13	-	177	1	Intergenic	novelGene_3285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACTTTTTTTCCATGT	2780	False	NA	NA	False	NA	NA	NA	100783826	100783649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_100783600_100783800
Isoform_42910_13	chr13	+	180	1	Intergenic	novelGene_3286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTCAACGAT	NA	False	NA	NA	False	NA	NA	NA	100786498	100786678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100786500_100786700
Isoform_42915_19	chr13	-	174	1	Intergenic	novelGene_3287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAACTAACAA	NA	False	NA	NA	False	NA	NA	NA	100844099	100843925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_100843900_100844100
Isoform_42916_23	chr13	-	178	1	Intergenic	novelGene_3288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAAAAAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	100849760	100849582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_100849600_100849800
Isoform_42917_634	chr13	+	176	1	Intergenic	novelGene_3289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	634	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	100868425	100868601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100868400_100868600
Isoform_42920_9	chr13	-	174	1	FSM	ENSMUSG00000075054.6	ENSMUST00000222595.2	2749	1	1804	771	1579	-477	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGAAAAAAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	18166109	18165935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_18165900_18166100
Isoform_42921_7	chr13	+	165	1	Intergenic	novelGene_3290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	100869481	100869646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100869500_100869600
Isoform_42923_3	chr13	+	388	1	Intergenic	novelGene_3291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAATAAATCGTAAA	NA	False	NA	NA	False	NA	NA	NA	100870502	100870890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100870500_100870900
Isoform_42924_6	chr13	+	175	1	Intergenic	novelGene_3292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATGCTGTTAATAGA	NA	False	NA	NA	False	NA	NA	NA	100876769	100876944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100876800_100876900
Isoform_42929_4	chr13	-	900	1	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	29	-2778	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTAACAGGTTT	NA	False	NA	NA	False	NA	NA	NA	100912378	100911478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_100911500_100912400
Isoform_42937_7	chr11	-	200	1	Intergenic	novelGene_2219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAGAAAAGC	6067	False	NA	NA	False	NA	NA	NA	106914641	106914441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_106914400_106914600
Isoform_42939_46	chr13	+	191	1	Intergenic	novelGene_3294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAACAGTGCCCTGAT	NA	False	NA	NA	False	NA	NA	NA	100948934	100949125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100948900_100949100
Isoform_42940_12	chr13	-	175	1	FSM	ENSMUSG00000021629.11	ENSMUST00000224177.2	4000	1	3555	270	3555	-270	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACATTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	100957502	100957327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_100957300_100957500
Isoform_42941_5	chr13	+	190	1	Intergenic	novelGene_3295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCAGGGTTTGTACATGT	NA	False	NA	NA	False	NA	NA	NA	100977658	100977848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_100977700_100977800
Isoform_42942_6	chr13	-	174	1	Intergenic	novelGene_3296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAACTCTAACT	NA	False	NA	NA	False	NA	NA	NA	101023038	101022864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_101022900_101023000
Isoform_42943_8	chr13	-	176	1	Intergenic	novelGene_3297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTGAAATCC	NA	False	NA	NA	False	NA	NA	NA	101128605	101128429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_101128400_101128600
Isoform_42944_26	chr13	-	176	1	Intergenic	novelGene_3298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAGAATTAAT	NA	False	NA	NA	False	NA	NA	NA	101293904	101293728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_101293700_101293900
Isoform_42949_7	chr13	-	176	1	Intergenic	novelGene_2932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18632931	18632755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_18632800_18632900
Isoform_42950_3	chr13	-	159	1	Intergenic	novelGene_3299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAGTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	103223274	103223115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_103223100_103223300
Isoform_42952_7	chr13	+	160	1	Intergenic	novelGene_3300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	104121237	104121397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_104121200_104121400
Isoform_42954_12	chr13	+	160	1	Intergenic	novelGene_2933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATTAAAAAAA	8752	False	NA	NA	False	NA	NA	NA	18726435	18726595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_18726400_18726600
Isoform_4296_75	chr10	-	2377	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	4	2221	4	-2221	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGACGGTCCCTGGATT	NA	False	NA	-1	True	AGTAAA	-18	NA	115151492	115125209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
Isoform_42962_9	chr13	-	177	1	Intergenic	novelGene_3301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104416939	104416762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_104416800_104416900
Isoform_42963_47	chr13	+	177	1	Intergenic	novelGene_3302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAGAGAGATGTT	NA	False	NA	NA	False	NA	NA	NA	104486680	104486857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_104486700_104486900
Isoform_42965_51	chr13	-	183	1	Intergenic	novelGene_3303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTATATGATTCTTAT	NA	False	NA	NA	False	NA	NA	NA	104592759	104592576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_104592600_104592800
Isoform_42966_66	chr2	-	176	1	Intergenic	novelGene_6117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATAATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	31621864	31621688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_31621700_31621900
Isoform_42968_25	chr13	+	176	1	Intergenic	novelGene_3304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	105037979	105038155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_105038000_105038200
Isoform_4297_28	chr10	-	4582	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	2	18	2	-18	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGCAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	115151494	115123006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
Isoform_42970_4	chr13	-	210	1	Intergenic	novelGene_3305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGAAAGGGCAAT	9496	False	NA	1	True	NA	NA	NA	106927433	106927223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_106927200_106927400
Isoform_42974_5	chr13	+	176	1	Intergenic	novelGene_3306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	106985931	106986107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_106985900_106986100
Isoform_42975_149	chr18	-	177	1	Intergenic	novelGene_5294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACATA	NA	False	NA	NA	False	NA	NA	NA	22724284	22724107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_22724100_22724300
Isoform_42976_5	chr13	+	5234	1	Intergenic	novelGene_3307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTTGACCTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	107047943	107053177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_107047900_107053200
Isoform_42977_30	chr13	+	178	1	Intergenic	novelGene_3308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACCAGGT	NA	False	NA	NA	False	NA	NA	NA	107059310	107059488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_107059300_107059500
Isoform_42978_3	chr13	-	205	1	Intergenic	novelGene_3309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACCAACAATGCTCAT	NA	False	NA	NA	False	NA	NA	NA	107074025	107073820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_107073800_107074000
Isoform_42979_7	chr13	-	174	1	Intergenic	novelGene_3310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTTTTAATTACAT	NA	False	NA	NA	False	NA	NA	NA	107078011	107077837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_107077800_107078000
Isoform_4298_101	chr10	-	1816	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	7	2779	7	-2779	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGTTTTAGAATGGTT	NA	False	NA	-11	True	ATTAAA	-17	NA	115151489	115125767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
Isoform_42980_13	chr1	-	178	1	FSM	ENSMUSG00000022995.17	ENSMUST00000195461.2	5962	1	624	5160	624	-5160	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	181767526	181767348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_181767300_181767500
Isoform_42982_45	chr13	-	174	1	Intergenic	novelGene_3311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATACTAACATC	NA	False	NA	NA	False	NA	NA	NA	107104665	107104491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_107104500_107104700
Isoform_42983_3	chr13	-	213	1	Intergenic	novelGene_3312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTTACTTACAAGTA	NA	False	NA	NA	False	NA	NA	NA	107120173	107119960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_107120000_107120200
Isoform_42984_14	chr13	+	184	1	Intergenic	novelGene_3313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	107120701	107120885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_107120700_107120900
Isoform_42985_5	chr13	+	178	1	Intergenic	novelGene_3314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTCTATTTGA	NA	False	NA	NA	False	NA	NA	NA	107173486	107173664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_107173500_107173700
Isoform_42987_12	chr9	+	174	1	Intergenic	novelGene_11657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	7433	False	NA	NA	False	NA	NA	NA	108010080	108010254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_108010100_108010300
Isoform_42988_155	chr13	-	906	1	FSM	ENSMUSG00000049233.8	ENSMUST00000061241.8	586	1	-37	-283	-37	283	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	107551266	107550360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_107550400_107551300
Isoform_42989_8	chr13	-	174	1	Intergenic	novelGene_3315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAGTAAATAT	NA	False	NA	NA	False	NA	NA	NA	107666308	107666134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_107666100_107666300
Isoform_42991_4	chr13	-	196	1	Intergenic	novelGene_3316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	107811910	107811714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_107811700_107811900
Isoform_42992_7	chr13	-	2226	1	Intergenic	novelGene_3317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACCTGTACTTGGCCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	108180878	108178652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_108178700_108180900
Isoform_42995_4481	chr13	+	862	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	-23	-44	-23	44	mono-exon	FALSE	NA	NA	NA	NA	NA	4481	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAAAAAAATGCAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	108807113	108807975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_108807100_108808000
Isoform_43007_5	chr13	-	176	1	Intergenic	novelGene_3318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATATATAAACTG	NA	False	NA	NA	False	NA	NA	NA	109794888	109794712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_109794700_109794900
Isoform_4301_46	chr10	-	4164	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-2	440	1	-440	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTGTTCCTTTTCT	NA	False	NA	-10	True	NA	NA	NA	115151498	115123428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
Isoform_43010_4	chr13	+	176	1	Intergenic	novelGene_3319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTCATAGACTCAA	NA	False	NA	NA	False	NA	NA	NA	110300821	110300997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_110300800_110301000
Isoform_43011_5	chr13	-	1560	1	Antisense	novelGene_ENSMUSG00000021701.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7390	False	NA	NA	False	NA	NA	NA	110538062	110536502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_110536500_110538100
Isoform_43012_32	chr13	+	179	1	Intergenic	novelGene_3320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	110666457	110666636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_110666500_110666600
Isoform_43013_3	chr13	+	178	1	Intergenic	novelGene_3321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	111349471	111349649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_111349500_111349600
Isoform_43015_4	chr13	+	174	1	Intergenic	novelGene_3322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGCAAGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	111529566	111529740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_111529600_111529700
Isoform_43016_9	chr13	+	174	1	Intergenic	novelGene_3323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATCAAATATTTAAAT	NA	False	NA	NA	False	NA	NA	NA	111533201	111533375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_111533200_111533400
Isoform_43018_26	chr13	-	172	1	Intergenic	novelGene_3324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAAACTCTGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	111647111	111646939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_111646900_111647100
Isoform_43019_11	chr13	+	177	1	Intergenic	novelGene_3325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTGGCTGGTAGAAGA	NA	False	NA	NA	False	NA	NA	NA	111681202	111681379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_111681200_111681400
Isoform_43021_4	chr13	-	152	1	Intergenic	novelGene_3326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAATCGGATTGAGCGT	NA	False	NA	NA	False	NA	NA	NA	111683753	111683601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_111683600_111683800
Isoform_43022_5	chr13	-	384	1	FSM	ENSMUSG00000096842.2	ENSMUST00000179668.2	78	1	-30	-276	-30	276	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCTAGATTTGTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	111730175	111729791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_111729800_111730200
Isoform_43023_43	chr13	+	177	1	Intergenic	novelGene_3327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	111731959	111732136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_111732000_111732100
Isoform_43024_4	chr13	-	171	1	Intergenic	novelGene_3328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAATTAAAAAAAAAGAGC	960	False	NA	NA	False	NA	NA	NA	111776307	111776136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_111776100_111776300
Isoform_43025_7	chr13	-	175	1	Intergenic	novelGene_3329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAGTTGAACA	NA	False	NA	NA	False	NA	NA	NA	111840659	111840484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_111840500_111840700
Isoform_43036_11	chr13	+	177	1	Intergenic	novelGene_3330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAAAATTCAGGG	NA	False	NA	NA	False	NA	NA	NA	112133959	112134136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_112134000_112134100
Isoform_43037_107	chr13	-	177	1	Intergenic	novelGene_3331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATAAAGATT	9704	False	NA	NA	False	NA	NA	NA	112592105	112591928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_112591900_112592100
Isoform_43038_5	chr13	-	890	1	NIC	ENSMUSG00000021215.16	novel	2680	12	NA	NA	-20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGGACTACTCTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	3968198	3967308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_3967300_3968200
Isoform_43050_8	chr13	-	173	1	Intergenic	novelGene_3332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATATTTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	112661846	112661673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_112661700_112661800
Isoform_43056_26	chr13	-	1111	1	FSM	ENSMUSG00000114547.2	ENSMUST00000225150.2	1342	1	382	-151	382	151	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAAAAAATAC	NA	False	NA	NA	False	AGTAAA	-7	NA	112731236	112730125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_112730100_112731200
Isoform_43057_23	chr13	-	1189	1	FSM	ENSMUSG00000114547.2	ENSMUST00000225150.2	1342	1	308	-155	308	155	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAATACTATA	NA	False	NA	NA	False	AGTAAA	-11	NA	112731310	112730121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_112730100_112731300
Isoform_43063_4	chr13	-	1005	1	Antisense	novelGene_ENSMUSG00000047789.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTAAACCCAACAAACAGC	4256	False	NA	NA	False	NA	NA	NA	112869872	112868867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_112868900_112869900
Isoform_43064_3	chr13	-	2378	1	Antisense	novelGene_ENSMUSG00000047789.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTAAACCCAACAAACAGC	2883	False	NA	NA	False	NA	NA	NA	112871245	112868867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_112868900_112871200
Isoform_43065_66	chr13	+	203	1	Intergenic	novelGene_3333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATATCTGAGCAGTAAGG	NA	False	NA	NA	False	NA	NA	NA	112976557	112976760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_112976600_112976800
Isoform_43066_7	chr13	+	167	1	Intergenic	novelGene_3334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAATGGGTAGTAGGA	7296	False	NA	NA	False	NA	NA	NA	113044908	113045075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_113044900_113045100
Isoform_43067_9	chr13	+	2970	2	Antisense	novelGene_ENSMUSG00000016018.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	1848	False	NA	NA	False	NA	NA	NA	113050243	113053236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_113051917_113051939
Isoform_43068_3	chr13	-	440	1	Intergenic	novelGene_3335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGACAAAAAAAAAAAAA	8075	False	NA	NA	False	NA	NA	NA	113088235	113087795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_113087800_113088200
Isoform_43070_3	chr13	+	5890	1	Antisense	novelGene_ENSMUSG00000003062.14_AS_novelGene_ENSMUSG00000105848.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGGCAGGATGAGTGGG	NA	False	NA	NA	False	AAAAAG	-39	NA	19573593	19579483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_19573600_19579500
Isoform_43072_5	chr13	-	173	1	Intergenic	novelGene_3336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGGGGAGGCTATG	NA	False	NA	NA	False	NA	NA	NA	113185213	113185040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_113185000_113185200
Isoform_43074_3	chr13	-	325	1	Intergenic	novelGene_3337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAGGTCACGGG	NA	False	NA	NA	False	NA	NA	NA	113377827	113377502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_113377500_113377800
Isoform_43075_15	chr13	+	179	1	Intergenic	novelGene_3338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAATAGGTGTAGG	NA	False	NA	NA	False	NA	NA	NA	113658895	113659074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_113658900_113659100
Isoform_4309_34	chr10	-	3072	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	13	-1	-3	1	multi-exon	FALSE	canonical	3	189	junction_4	16.3291151015602	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198139	115176645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
Isoform_43090_79	chr13	+	5316	1	Intergenic	novelGene_3339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	113855062	113860378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_113855100_113860400
Isoform_43095_968	chr13	+	5239	1	Intergenic	novelGene_3340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	968	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	113855140	113860379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_113855100_113860400
Isoform_43099_12	chr17	+	494	1	Intergenic	novelGene_4895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGGGTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	32588587	32589081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32588600_32589100
Isoform_4310_6	chr10	-	2751	8	NNC	ENSMUSG00000069520.7	novel	2799	7	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.5740180914356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198384	115176645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_115178159_115178185_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115198291
Isoform_43109_3541	chr13	+	5198	1	Intergenic	novelGene_3341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3541	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATCAGAGTAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	113855171	113860369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_113855200_113860400
Isoform_4311_139	chr10	-	2968	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	45	-1	2	1	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198127	115176645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
Isoform_43113_16	chr13	-	2827	1	Intergenic	novelGene_3342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATGTAGCCAAGACA	NA	False	NA	NA	False	NA	NA	NA	113858005	113855178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_113855200_113858000
Isoform_43118_5	chr5	-	4900	1	Intergenic	novelGene_8600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	88315330	88310430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_88310400_88315300
Isoform_43119_6	chr5	-	4784	1	Intergenic	novelGene_8596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	88315213	88310429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_88310400_88315200
Isoform_4312_7	chr10	-	2968	8	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.340692271461	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198154	115176645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_115178159_115178185_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
Isoform_43130_8	chr5	-	3177	1	Intergenic	novelGene_8599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	88313607	88310430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_88310400_88313600
Isoform_43131_10	chr5	-	2981	1	Intergenic	novelGene_8598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	88313411	88310430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_88310400_88313400
Isoform_4314_7	chr10	-	1332	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	18	1662	-2	1339	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGCTCCTCCCGTGTTC	NA	False	NA	NA	False	AATAAA	-18	NA	115198154	115178308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
Isoform_43158_56	chr5	-	175	1	Intergenic	novelGene_9160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149551744	149551569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_149551600_149551700
Isoform_43159_4	chr13	+	1499	1	NIC	ENSMUSG00000042348.11	novel	3364	5	NA	NA	20	-359253	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTACCAAATAAG	NA	False	NA	NA	False	NA	NA	NA	113931060	113932559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_113931100_113932600
Isoform_43160_3	chr13	+	200	1	Intergenic	novelGene_3347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGATACTGTATTTCC	NA	False	NA	NA	False	NA	NA	NA	113935414	113935614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_113935400_113935600
Isoform_43161_11	chr13	-	6695	1	Intergenic	novelGene_3348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGCGTGGGGTCAGCCA	NA	False	NA	NA	False	AATAAA	-41	NA	114124682	114117987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_114118000_114124700
Isoform_43162_41	chr13	-	1416	1	Intergenic	novelGene_3349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-26	NA	114127703	114126287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_114126300_114127700
Isoform_43164_11	chr13	+	184	1	Intergenic	novelGene_2934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAGGCTATACTCAA	NA	False	NA	NA	False	NA	NA	NA	19972530	19972714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_19972500_19972700
Isoform_43165_24	chr13	-	768	1	Intergenic	novelGene_3351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114208075	114207307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_114207300_114208100
Isoform_43166_14	chr13	-	188	1	Intergenic	novelGene_3352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGTAGAGAGGAGAGCC	NA	False	NA	NA	False	NA	NA	NA	114209152	114208964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_114209000_114209200
Isoform_43167_3	chr13	-	1255	1	Intergenic	novelGene_3353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-36	NA	114248965	114247710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_114247700_114249000
Isoform_43168_4	chr13	-	4394	1	FSM	ENSMUSG00000114696.2	ENSMUST00000223997.2	1976	1	-355	-2063	-355	2063	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACGCCCATGTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	114257307	114252913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_114252900_114257300
Isoform_43170_3	chr13	-	1458	1	Antisense	novelGene_ENSMUSG00000042348.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAACCCCTAAGAGATC	NA	False	NA	NA	False	NA	NA	NA	114293302	114291844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_114291800_114293300
Isoform_43171_28	chr13	-	193	1	Intergenic	novelGene_3354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAGGTGAGAGATTAC	6924	False	NA	NA	False	NA	NA	NA	114381149	114380956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_114381000_114381100
Isoform_43176_24	chr13	-	180	1	Intergenic	novelGene_3355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAACCCT	1569	False	NA	NA	False	NA	NA	NA	114605532	114605352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_114605400_114605500
Isoform_43181_23	chr13	-	182	1	Intergenic	novelGene_2935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATATATAAATAAATAT	NA	False	NA	NA	False	NA	NA	NA	20149445	20149263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_20149300_20149400
Isoform_43183_5	chr13	+	167	1	Intergenic	novelGene_3356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAACTAGTATA	NA	False	NA	NA	False	NA	NA	NA	117344043	117344210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_117344000_117344200
Isoform_43184_13	chr13	-	175	1	Intergenic	novelGene_3357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	117359797	117359622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_117359600_117359800
Isoform_43185_8	chr13	+	166	1	FSM	ENSMUSG00000021728.9	ENSMUST00000224455.2	2136	1	175	1795	175	-1751	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	117364736	117364902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_117364700_117364900
Isoform_43186_164	chr13	+	751	1	FSM	ENSMUSG00000021728.9	ENSMUST00000224455.2	2136	1	1342	43	1342	1	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	117365903	117366654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_117365900_117366700
Isoform_4319_25	chr10	-	2954	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	68.9365650435239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198126	115176645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197969
Isoform_43190_15	chr9	+	176	1	Intergenic	novelGene_11223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	44472560	44472736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_44472600_44472700
Isoform_43191_3	chr13	+	171	1	Intergenic	novelGene_3358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117846635	117846806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_117846600_117846800
Isoform_43193_5	chr13	-	178	1	Intergenic	novelGene_3359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGAGTACAGTTG	NA	False	NA	NA	False	NA	NA	NA	118271788	118271610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_118271600_118271800
Isoform_43194_9	chr13	-	181	1	Intergenic	novelGene_3360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	118936151	118935970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_118936000_118936200
Isoform_43196_32	chr13	+	177	1	Intergenic	novelGene_3361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGAC	NA	False	NA	NA	False	NA	NA	NA	119402067	119402244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_119402100_119402200
Isoform_43197_3	chr13	+	1414	1	Intergenic	novelGene_3362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119535060	119536474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_119535100_119536500
Isoform_43198_3	chr13	-	5821	1	Antisense	novelGene_ENSMUSG00000025451.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	3337	False	NA	NA	False	NA	NA	NA	119598185	119592364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_119592400_119598200
Isoform_43200_3	chr13	-	656	1	Antisense	novelGene_ENSMUSG00000025451.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTGGTATCCTCAAAT	7223	False	NA	NA	False	NA	NA	NA	119594299	119593643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_-_119593600_119594300
Isoform_43203_175	chr18	-	176	1	Intergenic	novelGene_5439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	9922	False	NA	NA	False	NA	NA	NA	56459079	56458903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_56458900_56459100
Isoform_43204_7	chr13	-	176	1	Intergenic	novelGene_3363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGAATACTTAAAGG	NA	False	NA	NA	False	NA	NA	NA	120154673	120154497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_120154500_120154700
Isoform_43209_141	chr13	+	175	1	Intergenic	novelGene_2936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCATTTTATT	NA	False	NA	NA	False	NA	NA	NA	20217549	20217724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_20217500_20217700
Isoform_4321_27	chr10	-	2891	8	NNC	ENSMUSG00000069520.7	novel	2799	7	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.5182358445422	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198412	115176645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_115178159_115178185_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115198291
Isoform_43210_5	chr13	+	188	1	Antisense	novelGene_ENSMUSG00000095930.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCCTGTTTATTTTACC	NA	False	NA	NA	False	NA	NA	NA	120186143	120186331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_120186100_120186300
Isoform_43212_10	chr13	+	175	1	Intergenic	novelGene_3365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGGTGAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	120233729	120233904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_120233700_120233900
Isoform_43213_7	chr13	+	196	1	Intergenic	novelGene_3366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGACACAAAACATAGAA	NA	False	NA	NA	False	NA	NA	NA	120249258	120249454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_120249300_120249500
Isoform_43214_3	chr13	+	879	1	Intergenic	novelGene_3367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATCTGTGTAATTGTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	120403515	120404394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_120403500_120404400
Isoform_43217_23	chr13	-	166	1	Intergenic	novelGene_2937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAATAAAATAT	NA	False	NA	NA	False	NA	NA	NA	20419714	20419548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_20419500_20419700
Isoform_43220_17	chr13	+	168	1	Intergenic	novelGene_2938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	21108537	21108705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_21108500_21108700
Isoform_43223_12	chr13	+	160	1	Genic_Genomic	ENSMUSG00000060404.4	novel	NA	NA	NA	NA	3256	14	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATAAAAAAAAAAGA	7599	False	NA	NA	False	NA	NA	NA	21303119	21303279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_+_21303100_21303300
Isoform_43224_3	chr13	-	180	1	Intergenic	novelGene_2939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAACGGTCTTATTTAA	NA	False	NA	NA	False	NA	NA	NA	21336687	21336507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_21336500_21336700
Isoform_43225_23	chr13	+	182	1	Intergenic	novelGene_2940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTGATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	21340259	21340441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_21340300_21340400
Isoform_4323_13	chr10	-	2872	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	66.9842435867487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198129	115176645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115197956
Isoform_43233_5	chr13	+	172	1	Intergenic	novelGene_2899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGGGGTACAGAA	NA	False	NA	NA	False	NA	NA	NA	4669421	4669593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_4669400_4669600
Isoform_43234_6	chr13	-	201	1	Intergenic	novelGene_2941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATTCCTTCTGAGGTA	1025	False	NA	NA	False	AAAACA	-28	NA	21452712	21452511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_21452500_21452700
Isoform_43235_4	chr13	-	172	1	Intergenic	novelGene_2942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAAAGAACAGA	8679	False	NA	NA	False	NA	NA	NA	21522414	21522242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_21522200_21522400
Isoform_43236_4	chr13	-	350	2	Intergenic	novelGene_2943	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAACAAACAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	21565945	21565561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_21565631_21565664
Isoform_43237_3	chr13	+	194	1	FSM	ENSMUSG00000114003.2	ENSMUST00000221154.2	781	1	-12	599	-12	-599	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATTTGCATGCAGCG	NA	False	NA	NA	False	NA	NA	NA	3348874	3349068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_3348900_3349100
Isoform_43242_119	chr13	+	1910	1	FSM	ENSMUSG00000078139.4	ENSMUST00000104942.2	1924	1	4	10	4	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGTAGAA	NA	False	NA	NA	False	TTTAAA	-17	NA	21679396	21681306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21679400_21681300
Isoform_43243_6	chr13	-	200	1	FSM	ENSMUSG00000079941.2	ENSMUST00000044043.3	390	1	268	-78	268	78	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	21685320	21685120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21685100_21685300
Isoform_43246_5	chr13	-	322	1	FSM	ENSMUSG00000079941.2	ENSMUST00000044043.3	390	1	147	-79	147	79	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	21685441	21685119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21685100_21685400
Isoform_43247_13	chr13	+	465	1	FSM	ENSMUSG00000071516.3	ENSMUST00000070124.5	393	1	-27	-45	-27	45	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTCCAAAGAGACCTAA	3372	False	NA	3	True	NA	NA	NA	21900564	21901029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21900600_21901000
Isoform_43249_3	chr13	+	487	1	FSM	ENSMUSG00000101355.2	ENSMUST00000188775.2	411	1	-32	-44	-32	44	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACCTACACAAAGGTGCT	4604	False	NA	NA	False	NA	NA	NA	21901796	21902283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21901800_21902300
Isoform_43250_7	chr13	-	805	1	FSM	ENSMUSG00000080076.5	ENSMUST00000091710.6	352	1	-44	-409	-44	409	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21906022	21905217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21905200_21906000
Isoform_43251_5	chr13	+	450	1	FSM	ENSMUSG00000114279.2	ENSMUST00000224651.2	524	1	32	42	32	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTCTTTGAAAAGGGC	9053	False	NA	NA	False	NA	NA	NA	21906245	21906695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21906200_21906700
Isoform_43253_4	chr13	-	419	1	FSM	ENSMUSG00000063021.4	ENSMUST00000074752.4	393	1	-33	7	-33	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGAGGCCCTTGATAGA	NA	False	NA	NA	False	NA	NA	NA	21938030	21937611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21937600_21938000
Isoform_43254_9	chr13	-	792	1	FSM	ENSMUSG00000058773.3	ENSMUST00000080511.3	743	1	0	-49	0	49	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGCTCTGTGAATGTA	NA	False	NA	NA	False	NA	NA	NA	21964795	21964003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21964000_21964800
Isoform_43255_88	chr13	-	732	1	FSM	ENSMUSG00000058773.3	ENSMUST00000080511.3	743	1	0	11	0	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTAGGTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	21964795	21964063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21964100_21964800
Isoform_43258_5	chr13	-	481	1	FSM	ENSMUSG00000101972.2	ENSMUST00000189457.2	411	1	-25	-45	-25	45	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTCACCAAAAAGCGGC	NA	False	NA	NA	False	NA	NA	NA	21967565	21967084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21967100_21967600
Isoform_43259_5	chr13	-	446	1	FSM	ENSMUSG00000069309.3	ENSMUST00000091751.3	393	1	-30	-23	-30	23	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAAGGCTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	21971418	21970972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_21971000_21971400
Isoform_43260_4	chr13	+	1724	1	FSM	ENSMUSG00000069308.8	ENSMUST00000102982.2	469	1	-19	-1236	-19	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGTAATACAGTCTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	21971658	21973382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21971700_21973400
Isoform_43261_6	chr13	+	456	1	NIC	ENSMUSG00000069303.8	novel	1256	2	NA	NA	3	-2464	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCAGCGTAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	22017915	22018371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_22017900_22018400
Isoform_43263_8263	chr13	-	445	1	FSM	ENSMUSG00000094777.3	ENSMUST00000081342.7	482	1	2	35	2	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	8263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	22017675	22017230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_22017200_22017700
Isoform_43268_14	chr13	-	401	1	FSM	ENSMUSG00000069305.4	ENSMUST00000102979.2	430	1	0	29	0	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTAATCCTCCAAAGGG	NA	False	NA	NA	False	ACTAAA	-19	NA	22016366	22015965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_22016000_22016400
Isoform_4327_3	chr10	-	1552	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	-344	3762	-336	-2694	multi-exon	FALSE	canonical	3	8	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACTAATGTATTTTGT	2024	False	NA	NA	False	ATTAAA	-11	NA	115220684	115208070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115208852_115212256_115212453_115220109
Isoform_43271_8182	chr13	+	447	1	FSM	ENSMUSG00000094248.2	ENSMUST00000091745.6	480	1	-30	63	-30	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	8182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	21994604	21995051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_21994600_21995100
Isoform_43275_9	chr13	-	458	1	Genic_Genomic	ENSMUSG00000069307.8	novel	NA	NA	NA	NA	-2	-2465	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTTCAGCGTAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	21994369	21993911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_-_21993900_21994400
Isoform_43277_3	chr13	+	172	1	Intergenic	novelGene_2944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTTCATAGATGGGGA	NA	False	NA	21	True	ATTAAA	-3	NA	22112024	22112196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_22112000_22112200
Isoform_43279_19	chr13	-	171	1	Intergenic	novelGene_2945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTCTCAAATGC	NA	False	NA	NA	False	NA	NA	NA	22128020	22127849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_22127800_22128000
Isoform_4328_4	chr10	-	1320	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	-105	3755	-97	-2687	multi-exon	FALSE	canonical	3	8	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTATTTTGTATGAATT	2263	False	NA	NA	False	ATTAAA	-18	NA	115220445	115208063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115208852_115212256_115212453_115220109
Isoform_43280_4	chr13	-	159	1	Intergenic	novelGene_2900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5413275	5413116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_5413100_5413300
Isoform_43281_88	chr13	+	161	1	Intergenic	novelGene_2946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22200083	22200244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_22200100_22200200
Isoform_43283_4	chr13	-	1100	1	FSM	ENSMUSG00000069302.6	ENSMUST00000091742.6	405	1	-28	-667	-28	667	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATATGTGTGCTCTGCA	NA	False	NA	NA	False	AATAAA	-19	NA	22219766	22218666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_22218700_22219800
Isoform_43285_26	chr13	+	481	1	FSM	ENSMUSG00000062727.5	ENSMUST00000110455.4	476	1	-31	26	-31	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACCAGTATTAGAGCTG	NA	False	NA	13	True	NA	NA	NA	22220008	22220489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_22220000_22220500
Isoform_43288_25	chr13	-	482	1	FSM	ENSMUSG00000069301.6	ENSMUST00000091741.6	485	1	-16	19	-16	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTCCTAACAAGGGCT	NA	False	NA	0	True	NA	NA	NA	22227130	22226648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_22226600_22227100
Isoform_43289_19	chr13	+	460	1	FSM	ENSMUSG00000069300.4	ENSMUST00000110452.2	463	1	-15	18	-15	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTTTAAAGAGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	22227368	22227828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_22227400_22227800
Isoform_4329_3	chr10	-	2511	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	-75	2534	-67	-1466	multi-exon	FALSE	canonical	3	8	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATGTGTGTCTCTGTG	2293	False	NA	NA	False	AATAAA	-14	NA	115220415	115206842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_115208852_115212256_115212453_115220109
Isoform_43290_7	chr13	-	157	1	Intergenic	novelGene_2947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22291277	22291120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_22291100_22291300
Isoform_43291_12	chr13	+	178	1	Intergenic	novelGene_2948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGGAACA	NA	False	NA	NA	False	NA	NA	NA	22605529	22605707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_22605500_22605700
Isoform_43294_17	chr13	+	175	1	Intergenic	novelGene_2949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATCTT	NA	False	NA	NA	False	NA	NA	NA	22974284	22974459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_22974300_22974500
Isoform_43296_10	chr13	+	172	1	Antisense	novelGene_ENSMUSG00000046351.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTAATGCTTC	3409	False	NA	NA	False	NA	NA	NA	23538828	23539000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_23538800_23539000
Isoform_43298_3	chr13	-	872	1	Intergenic	novelGene_2901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	5911195	5910323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_5910300_5911200
Isoform_43301_7	chr13	+	392	1	FSM	ENSMUSG00000060981.8	ENSMUST00000102972.6	470	1	37	41	37	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCTTATTAAAAGAGC	4598	False	NA	NA	False	NA	NA	NA	23715256	23715648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23715300_23715600
Isoform_43302_3	chr13	+	418	1	FSM	ENSMUSG00000061991.3	ENSMUST00000073261.3	399	1	-31	12	-31	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAAGTAAGCCAGTGAG	7386	False	NA	NA	False	NA	NA	NA	23718044	23718462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23718000_23718500
Isoform_43306_5	chr13	+	492	1	FSM	ENSMUSG00000099517.3	ENSMUST00000080859.8	530	1	-4	42	-4	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTCCAAAAAAAGAACTGT	8929	False	NA	NA	False	TTTAAA	-22	NA	23719587	23720079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23719600_23720100
Isoform_43307_274	chr13	+	177	1	Intergenic	novelGene_2950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTAGGG	NA	False	NA	NA	False	NA	NA	NA	23724221	23724398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_23724200_23724400
Isoform_43308_23	chr13	+	499	1	FSM	ENSMUSG00000052565.8	ENSMUST00000045301.9	7425	1	1774	5152	1774	-5152	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACGGCCAAGAAGACT	15	False	NA	NA	False	NA	NA	NA	23739209	23739708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23739200_23739700
Isoform_43309_10	chr13	-	489	1	FSM	ENSMUSG00000069273.3	ENSMUST00000105107.2	836	1	-17	364	-17	-364	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATCCACCAAAGATGCT	1	True	NA	NA	False	NA	NA	NA	23746560	23746071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23746100_23746600
Isoform_43312_17	chr13	-	518	1	FSM	ENSMUSG00000069272.7	ENSMUST00000102969.6	704	1	61	125	61	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTATAAGCCTTAAGTG	8875	False	NA	NA	False	AGTAAA	-8	NA	23755333	23754815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23754800_23755300
Isoform_43314_7	chr13	+	453	1	FSM	ENSMUSG00000058385.9	ENSMUST00000079251.8	618	1	-8	173	-8	-173	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCTTTTCAGAGCCAC	3215	False	NA	NA	False	NA	NA	NA	23755561	23756014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23755600_23756000
Isoform_43316_3	chr13	+	1250	1	FSM	ENSMUSG00000099583.3	ENSMUST00000105105.4	1249	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGGAAAGAAAGA	2947	False	NA	NA	False	NA	NA	NA	23759936	23761186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23759900_23761200
Isoform_43317_127	chr13	+	373	1	FSM	ENSMUSG00000061482.8	ENSMUST00000102968.3	1138	1	-30	795	-30	-795	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAGGCCCTTTTCA	1883	False	NA	-24	True	NA	NA	NA	23765550	23765923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23765600_23765900
Isoform_43319_5	chr13	-	171	1	Intergenic	novelGene_2951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	3455	False	NA	NA	False	NA	NA	NA	23800227	23800056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_23800100_23800200
Isoform_43321_5	chr13	-	756	1	FSM	ENSMUSG00000051627.4	ENSMUST00000062045.4	1930	1	3	1171	3	-1171	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCTTTTCAGAGCCAC	NA	False	NA	NA	False	AGTAAA	-38	NA	23806538	23805782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23805800_23806500
Isoform_43325_3	chr13	-	486	1	FSM	ENSMUSG00000069270.7	ENSMUST00000171127.4	2482	1	-12	2008	-12	-2008	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTTTCAAAAGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	23867943	23867457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23867500_23867900
Isoform_43326_5	chr13	+	465	1	NIC	ENSMUSG00000018102.6	novel	1156	2	NA	NA	3	-8242	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTCAAAGAGAGAGCT	186	False	NA	NA	False	NA	NA	NA	23868184	23868649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_23868200_23868600
Isoform_43328_13	chr13	-	377	1	FSM	ENSMUSG00000060678.6	ENSMUST00000102967.3	820	1	-4	447	-4	-447	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTAGGAGTTGTTCAC	NA	False	NA	NA	False	NA	NA	NA	23882441	23882064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23882100_23882400
Isoform_43329_7	chr13	+	1557	1	FSM	ENSMUSG00000036181.3	ENSMUST00000040914.3	1560	1	-1	4	-1	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTGGACTCTTTCA	NA	False	NA	12	True	AATAAA	-17	NA	23922789	23924346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23922800_23924300
Isoform_43333_6	chr13	-	480	1	FSM	ENSMUSG00000069310.5	ENSMUST00000091752.5	630	1	81	69	81	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTCATGTAAAGTTGCT	4713	False	NA	-2	True	AAAAAG	-21	NA	23929504	23929024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23929000_23929500
Isoform_43334_37	chr13	+	487	1	FSM	ENSMUSG00000061615.3	ENSMUST00000078369.3	473	1	-48	34	-48	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGGCTCTTTTCAGA	352	False	NA	NA	False	NA	NA	NA	23935060	23935547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23935100_23935500
Isoform_43335_3	chr13	+	496	1	FSM	ENSMUSG00000069267.3	ENSMUST00000091703.3	620	1	78	46	78	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTCTGTAAAAGCAGCT	1619	False	NA	NA	False	NA	NA	NA	23936327	23936823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23936300_23936800
Isoform_43336_3	chr13	-	502	1	FSM	ENSMUSG00000069265.3	ENSMUST00000091701.3	534	1	0	32	0	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATTTCAAGTAAAATGGCT	NA	False	NA	NA	False	NA	NA	NA	23946369	23945867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_23945900_23946400
Isoform_43339_8	chr13	+	746	1	FSM	ENSMUSG00000049539.4	ENSMUST00000055770.4	741	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAACTCAAAGAGCCTGA	NA	False	NA	NA	False	TATAAA	-30	NA	23947648	23948394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_23947600_23948400
Isoform_43340_3	chr13	+	173	1	Intergenic	novelGene_2902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATGTATTTAATGC	NA	False	NA	NA	False	NA	NA	NA	6442406	6442579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_6442400_6442600
Isoform_43341_3	chr13	+	181	1	Intergenic	novelGene_2952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATTACCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	24068340	24068521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_24068300_24068500
Isoform_43342_4	chr13	+	445	1	FSM	ENSMUSG00000060081.2	ENSMUST00000072391.2	390	1	-25	-30	-25	30	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAAAGGCTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	24118419	24118864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_24118400_24118900
Isoform_43343_6	chr13	+	2896	1	Intergenic	novelGene_2953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4819	False	NA	NA	False	NA	NA	NA	24438890	24441786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_24438900_24441800
Isoform_43345_7	chr13	+	182	1	Intergenic	novelGene_2954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	24924321	24924503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_24924300_24924500
Isoform_43347_94	chr13	+	181	1	Intergenic	novelGene_2955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGACCATGCCATATT	NA	False	NA	3	True	NA	NA	NA	24960678	24960859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_24960700_24960900
Isoform_43353_4	chr13	-	1673	1	NIC	ENSMUSG00000006717.8	novel	721	3	NA	NA	26	-9005	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGATTT	4843	False	NA	NA	False	CATAAA	-12	NA	25015474	25013801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_25013800_25015500
Isoform_43356_3	chr13	-	175	1	Intergenic	novelGene_2956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	25022675	25022500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_25022500_25022700
Isoform_43360_5	chr13	-	1940	1	Intergenic	novelGene_2957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25377804	25375864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_25375900_25377800
Isoform_43361_47	chr13	+	178	1	Intergenic	novelGene_2959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25786350	25786528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_25786400_25786500
Isoform_43366_19	chr13	+	542	1	FSM	ENSMUSG00000113061.2	ENSMUST00000223428.2	607	1	67	-2	67	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAATTTAGTAATATT	NA	False	NA	-2	True	AATAAA	-17	NA	28441577	28442119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_28441600_28442100
Isoform_43367_15	chr13	+	468	2	Genic_Genomic	ENSMUSG00000113061.2	novel	607	1	NA	NA	70	4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTTAGTAATATTGA	NA	False	NA	0	True	AATAAA	-19	NA	28441580	28442121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_+_28441599_28441671
Isoform_43370_20	chr13	+	245	1	FSM	ENSMUSG00000113061.2	ENSMUST00000223428.2	607	1	365	-3	365	3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTTAGTAATATTG	NA	False	NA	-1	True	AATAAA	-18	NA	28441875	28442120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_+_28441900_28442100
Isoform_43375_14	chr13	-	182	1	Intergenic	novelGene_2960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	28862395	28862213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_28862200_28862400
Isoform_43376_4	chr13	+	169	1	Intergenic	novelGene_2962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	29028267	29028436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_29028300_29028400
Isoform_43378_151	chr13	-	4776	1	FSM	ENSMUSG00000076431.5	ENSMUST00000067230.6	4795	1	17	2	17	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGACTTTTGTCATCC	NA	False	NA	-2	True	AATAAA	-22	NA	29137679	29132903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_29132900_29137700
Isoform_4339_27	chr10	-	2785	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_16	168.781466973569	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417401	116321069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385011_116417357
Isoform_43391_34	chr13	+	169	1	Intergenic	novelGene_2963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAAAAAGACC	3106	False	NA	NA	False	NA	NA	NA	29155103	29155272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_29155100_29155300
Isoform_43392_6	chr13	-	190	1	Intergenic	novelGene_2964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGGCATTTAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	29330705	29330515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_29330500_29330700
Isoform_43394_5	chr13	+	3354	1	Antisense	novelGene_ENSMUSG00000006191.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCATCTAGCCACTTTT	NA	False	NA	NA	False	NA	NA	NA	30035676	30039030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_30035700_30039000
Isoform_43395_52	chr13	+	176	1	Intergenic	novelGene_2965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	30046167	30046343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_30046200_30046300
Isoform_43416_6	chr13	-	234	1	FSM	ENSMUSG00000068324.6	ENSMUST00000089635.6	330	1	-80	176	-80	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAAAACAATACAGTG	NA	False	NA	NA	False	NA	NA	NA	6713010	6712776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_6712800_6713000
Isoform_43417_29	chr13	-	1166	1	FSM	ENSMUSG00000076430.2	ENSMUST00000102943.2	1187	1	27	-6	27	6	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTATTGTATTATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	31131715	31130549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_31130500_31131700
Isoform_43418_3	chr13	+	191	1	Intergenic	novelGene_2966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAGATCAACCTGAA	NA	False	NA	NA	False	NA	NA	NA	31155460	31155651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_31155500_31155700
Isoform_43419_6	chr13	-	2350	1	FSM	ENSMUSG00000090863.2	ENSMUST00000170573.2	3200	1	-656	1506	-656	-1506	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATTCTTTTTGGTTGA	NA	False	NA	NA	False	AGTAAA	-19	NA	31743972	31741622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_31741600_31744000
Isoform_43420_5	chr13	+	4087	1	Intergenic	novelGene_2967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31854333	31858420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_31854300_31858400
Isoform_43421_7	chr13	+	174	1	Intergenic	novelGene_2968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	31867924	31868098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_31867900_31868100
Isoform_43422_19	chr13	-	176	1	Intergenic	novelGene_2969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTATCCATTCC	NA	False	NA	NA	False	NA	NA	NA	32037250	32037074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_32037100_32037200
Isoform_43424_7	chr13	-	179	1	Intergenic	novelGene_2970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	32559384	32559205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_32559200_32559400
Isoform_43426_41	chr8	-	177	1	Intergenic	novelGene_10735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	74339251	74339074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_74339100_74339300
Isoform_43428_11	chr13	-	179	1	Intergenic	novelGene_2972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGTATGTCAGAATTT	NA	False	NA	NA	False	NA	NA	NA	33069452	33069273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_33069300_33069500
Isoform_43430_3	chr13	-	167	1	Intergenic	novelGene_2973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGAAAAAAAAAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	33168728	33168561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_33168600_33168700
Isoform_43433_3	chr13	-	2160	1	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-4	-14143	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAATTTGGTG	NA	False	NA	NA	False	NA	NA	NA	34186773	34184613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_-_34184600_34186800
Isoform_43434_3	chr13	-	2581	2	Intergenic	novelGene_2974	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGGTTGTTTGTTTGTTT	NA	False	NA	-8	True	ATTAAA	-11	NA	34309848	34307245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_34309437_34309458
Isoform_43450_18	chr13	+	157	1	Intergenic	novelGene_2975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	34716313	34716470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_34716300_34716500
Isoform_43451_50	chr13	-	176	1	Intergenic	novelGene_2903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTAGGAGTG	NA	False	NA	NA	False	NA	NA	NA	7191271	7191095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_7191100_7191300
Isoform_43453_3	chr13	+	2555	1	ISM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	28208	0	356	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35087492	35090047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr13_+_35087500_35090000
Isoform_43454_8	chr13	+	177	1	Intergenic	novelGene_2976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATCTATTCCCTA	NA	False	NA	NA	False	NA	NA	NA	35097001	35097178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_35097000_35097200
Isoform_43455_15	chr13	-	208	1	Intergenic	novelGene_2977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGCAATGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	35127822	35127614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_35127600_35127800
Isoform_43456_5	chr13	-	176	1	Intergenic	novelGene_2978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAGTAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	35302425	35302249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_35302200_35302400
Isoform_43458_3	chr13	-	1052	1	FSM	ENSMUSG00000072421.5	ENSMUST00000159886.2	264	1	8	-796	8	796	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGCTTGGAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	8340141	8339089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr13_-_8339100_8340100
Isoform_43459_9	chr13	-	904	1	Intergenic	novelGene_2979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36018444	36017540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_36017500_36018400
Isoform_43460_4	chr13	+	169	1	Intergenic	novelGene_2980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAGAAAAGAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	36063820	36063989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_36063800_36064000
Isoform_43463_5	chr13	-	3279	1	Intergenic	novelGene_2981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	36420844	36417565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_36417600_36420800
Isoform_43467_4	chr13	-	3934	1	Intergenic	novelGene_2904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	77	False	NA	NA	False	NA	NA	NA	8815925	8811991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_8812000_8815900
Isoform_4347_97	chr10	-	2858	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_15	145.637593339598	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417404	116321069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
Isoform_43478_6	chr13	-	193	1	Intergenic	novelGene_2982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATAAGAAAATCT	NA	False	NA	NA	False	NA	NA	NA	36783308	36783115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_36783100_36783300
Isoform_43479_3	chr13	+	176	1	Intergenic	novelGene_2983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	37720918	37721094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_37720900_37721100
Isoform_4348_22	chr10	-	3225	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-355	0	intron_retention	FALSE	canonical	3	100	junction_15	145.637593339598	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417771	116321069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
Isoform_43480_3	chr13	+	185	1	Intergenic	novelGene_2984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAGTAATAAATAATAATC	1282	False	NA	NA	False	NA	NA	NA	37897845	37898030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_37897800_37898000
Isoform_43482_15	chr7	-	176	1	Intergenic	novelGene_10236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGGGGAGCC	NA	False	NA	NA	False	NA	NA	NA	101501483	101501307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_101501300_101501500
Isoform_43484_6	chr13	+	189	1	Intergenic	novelGene_2986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATCACACCATGACT	NA	False	NA	NA	False	NA	NA	NA	38033516	38033705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_38033500_38033700
Isoform_43496_3	chr13	+	3673	1	Antisense	novelGene_ENSMUSG00000021427.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAGAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38171452	38175125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_38171500_38175100
Isoform_43497_45	chr13	+	344	1	Intergenic	novelGene_2987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38174782	38175126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_38174800_38175100
Isoform_43500_5	chr13	+	175	1	Intergenic	novelGene_2988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGATGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	38268869	38269044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_38268900_38269000
Isoform_43501_3	chr13	+	5023	1	Antisense	novelGene_ENSMUSG00000021147.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGTGAAGCTATTTTA	NA	False	NA	NA	False	AAAAAG	-42	NA	8900924	8905947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_8900900_8905900
Isoform_43513_4	chr13	+	3242	1	Antisense	novelGene_ENSMUSG00000038991.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38688583	38691825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_38688600_38691800
Isoform_43514_10	chr13	-	175	1	Intergenic	novelGene_2989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATTACAAGAGTATA	NA	False	NA	NA	False	NA	NA	NA	38742662	38742487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_38742500_38742700
Isoform_43517_22	chr13	+	158	1	Intergenic	novelGene_2990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	38858688	38858846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_38858700_38858800
Isoform_43521_5	chr13	+	174	1	Intergenic	novelGene_2991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTTAAAAATACATA	NA	False	NA	NA	False	NA	NA	NA	40790506	40790680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_40790500_40790700
Isoform_43522_3	chr13	-	198	1	Intergenic	novelGene_2992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTCAATAATGATACAGAA	6979	False	NA	NA	False	NA	NA	NA	40994162	40993964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_40994000_40994200
Isoform_43523_4	chr13	+	182	1	Intergenic	novelGene_2993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	2136	False	NA	NA	False	NA	NA	NA	41003446	41003628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_41003400_41003600
Isoform_43524_166	chr13	+	177	1	Intergenic	novelGene_2994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATCG	2495	False	NA	NA	False	NA	NA	NA	41003805	41003982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_41003800_41004000
Isoform_43536_5	chr13	+	209	1	Intergenic	novelGene_2995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCAGACTTCAGGGT	NA	False	NA	NA	False	NA	NA	NA	41222959	41223168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_41223000_41223200
Isoform_43537_5	chr13	+	597	1	NIC	ENSMUSG00000091264.4	novel	4483	2	NA	NA	321	-25816	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41403640	41404237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr13_+_41403600_41404200
Isoform_43538_8	chr13	-	177	1	Intergenic	novelGene_2996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATGTCAACACA	5885	False	NA	NA	False	NA	NA	NA	41420118	41419941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_41419900_41420100
Isoform_43542_3	chr13	-	177	1	Intergenic	novelGene_2997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAATAAAAAAACAGTCT	7918	False	NA	NA	False	NA	NA	NA	41839716	41839539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_41839500_41839700
Isoform_43544_153	chr1	-	179	1	Intergenic	novelGene_594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAAAG	4070	False	NA	NA	False	NA	NA	NA	171283883	171283704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_171283700_171283900
Isoform_43545_9	chr13	+	2842	1	Antisense	novelGene_ENSMUSG00000021149.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	9039419	9042261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr13_+_9039400_9042300
Isoform_43547_4	chr13	+	160	1	Intergenic	novelGene_2999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTTAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	43475022	43475182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_43475000_43475200
Isoform_43549_8	chr13	+	173	1	Intergenic	novelGene_3000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	43493048	43493221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_43493000_43493200
Isoform_43550_48	chr13	-	186	1	Intergenic	novelGene_3001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGATTAAAACCGA	NA	False	NA	NA	False	NA	NA	NA	43496858	43496672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_43496700_43496900
Isoform_43551_7	chr13	-	177	1	Intergenic	novelGene_2907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGATTATAAGGA	NA	False	NA	NA	False	NA	NA	NA	9051260	9051083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_9051100_9051300
Isoform_43554_9	chr13	+	189	1	Intergenic	novelGene_3002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCATGAAATTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	43636075	43636264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_43636100_43636300
Isoform_43557_24	chr13	-	177	1	Intergenic	novelGene_3003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	43767416	43767239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_43767200_43767400
Isoform_43559_31	chr14	-	1004	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	29	3565	-21	1	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACCATGGGAACTCTTC	NA	False	NA	-38	True	AATAAA	-15	NA	4198531	4189257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
Isoform_43569_304	chr14	-	5660	36	FSM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	0	4675	0	1959	multi-exon	FALSE	canonical	3	144	junction_31	34.1687767724051	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAGACTCTTTACTGAA	3843	False	NA	-1	True	ATTAAA	-13	NA	6104584	6038975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
Isoform_43571_4	chr14	-	5738	36	FSM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	0	4597	0	2037	multi-exon	TRUE	canonical	3	144	junction_31	34.1687767724051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAGACTCCATGGAAAAA	3843	False	NA	77	True	AATAAA	-17	NA	6104584	6038897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
Isoform_43579_18	chr14	-	2764	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	-8	179	-8	-179	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTCTTGTATGAGAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	6220491	6158015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
Isoform_4358_96	chr10	-	2724	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	15	-619	0	-2	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116417401	116321072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
Isoform_43580_69	chr14	-	2500	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	45	390	-2	4	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCAGTGCTTACC	NA	False	NA	-2	True	AATAAA	-19	NA	6220438	6158226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
Isoform_43581_43	chr14	-	2538	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	6	391	6	3	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTTCAGTGCTTAC	NA	False	NA	-3	True	AATAAA	-18	NA	6220477	6158227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
Isoform_43584_10	chr14	-	4371	4	ISM	ENSMUSG00000021785.9	ENSMUST00000153109.2	3296	5	-1	8978	-1	3336	5prime_fragment	FALSE	canonical	3	70	junction_2	8.52447456836295	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTTCTTTTTTCATTG	NA	False	NA	NA	False	AATAAA	-17	NA	6220437	6195441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_6199289_6208962_6209200_6215006_6215122_6220265
Isoform_43589_59	chr14	-	7345	25	FSM	ENSMUSG00000021733.12	ENSMUST00000057015.8	8132	25	790	-3	1	3	multi-exon	TRUE	canonical	3	66	junction_19	12.4782449576141	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTGTTGTTTTTTAC	NA	False	NA	-2	True	AATAAA	-17	NA	7766694	7669819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
Isoform_43590_14	chr14	-	7323	25	FSM	ENSMUSG00000021733.12	ENSMUST00000225630.3	3663	25	-27	-3633	-13	3	multi-exon	FALSE	canonical	0	0	junction_19	22.1114208172057	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTGTTGTTTTTTAC	NA	False	NA	-2	True	AATAAA	-17	NA	7766711	7669819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729888_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
Isoform_43598_5	chr14	-	1696	12	NNC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	8.96273275917545	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	1	True	AATAAA	-19	NA	8123351	8114269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574_8122970_8123250
Isoform_43599_12	chr14	-	1297	11	NIC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	9.8974744253269	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	1	True	AATAAA	-19	NA	8123347	8114269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8123250
Isoform_4360_31	chr10	-	3079	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	-337	-622	-337	0	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417753	116321069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
Isoform_43600_3	chr14	-	1440	10	NNC	ENSMUSG00000068758.9	novel	1128	10	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	10.434983894999	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGCTGCTATCAGTC	NA	False	NA	2	True	AATAAA	-20	NA	8123373	8114268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8122574_8122970_8123250
Isoform_43601_4	chr14	-	682	5	NIC	ENSMUSG00000068758.9	novel	1128	10	NA	NA	373	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	12.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTGCTGCTATCAG	NA	False	NA	0	True	AATAAA	-18	NA	8119769	8114270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8119495
Isoform_43604_5	chr14	-	6702	12	FSM	ENSMUSG00000021738.6	ENSMUST00000022257.4	6853	12	145	6	145	-6	multi-exon	FALSE	canonical	3	10	junction_11	5.78399044384977	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATACGGCTGGCTGCA	NA	False	NA	NA	False	AATAAA	-14	NA	8457127	8362466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393_8456691_8457012
Isoform_43607_4	chr14	-	1176	5	FSM	ENSMUSG00000033111.17	ENSMUST00000224389.2	2444	5	21	1247	-7	0	multi-exon	FALSE	canonical	3	13	junction_4	59.4011784394889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGAGTCTCCAGTT	NA	False	NA	-3	True	AATAAA	-23	NA	10185488	10167778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185429
Isoform_43608_5	chr14	-	2301	5	FSM	ENSMUSG00000033111.17	ENSMUST00000223762.2	2292	5	-2	-7	-2	7	multi-exon	FALSE	canonical	3	15	junction_4	58.5683361552981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAAGCTTTGTGTTTTCT	NA	False	NA	-1	True	AATACA	-26	NA	10185543	10166632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185505
Isoform_43610_13	chr14	-	1200	5	FSM	ENSMUSG00000033111.17	ENSMUST00000225294.2	1191	5	-4	-5	0	0	multi-exon	FALSE	canonical	3	25	junction_4	54.4196655631032	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGAGTCTCCAGTT	NA	False	NA	-3	True	AATAAA	-23	NA	10185509	10167778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185429
Isoform_43611_3	chr14	-	2357	5	FSM	ENSMUSG00000033111.17	ENSMUST00000225294.2	1191	5	-9	-1157	1	13	multi-exon	FALSE	canonical	3	25	junction_4	54.4196655631032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTGTTTTCTTTCTCC	NA	False	NA	5	True	AATACA	-32	NA	10185514	10166626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185429
Isoform_43613_10	chr14	-	1145	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	62	1245	0	1	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAGTCTCCAGTTCC	NA	False	NA	-1	True	AATAAA	-25	NA	10185528	10167776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
Isoform_43614_9	chr14	-	2291	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	60	101	1	7	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAAGCTTTGTGTTTTCT	NA	False	NA	-1	True	AATACA	-26	NA	10185530	10166632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
Isoform_43615_4	chr14	-	534	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	33	1885	-3	-2	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGAAGTTTCATTTTGT	NA	False	NA	NA	False	TATAAA	-28	NA	10185557	10168416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
Isoform_43617_21	chr14	-	1765	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	-110	-5	-110	5	multi-exon	FALSE	canonical	3	225	junction_1	7.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTGTATTTATTGCTAT	NA	False	NA	NA	False	AATAAA	-20	NA	14255743	14246204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14247587_14249552_14249623_14255430
Isoform_43618_377	chr14	-	1646	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	3	1	3	-1	multi-exon	FALSE	canonical	3	225	junction_1	7.5	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAAGGTTGTATTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	14255630	14246210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14247587_14249552_14249623_14255430
Isoform_43619_10	chr14	-	1818	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	-165	-3	80	3	multi-exon	FALSE	canonical	3	225	junction_1	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTGTATTTATTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	14255798	14246206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14247587_14249552_14249623_14255430
Isoform_43624_12	chr14	-	2507	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	3	-860	3	860	multi-exon	FALSE	canonical	3	225	junction_1	7.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGACTCTAATTAGTC	NA	False	NA	NA	False	AATAAA	-11	NA	14255630	14245349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14247587_14249552_14249623_14255430
Isoform_43626_10	chr14	-	3035	3	NNC	ENSMUSG00000021752.15	novel	3052	3	NA	NA	380	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	103.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAAGGTTGTATTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	14255253	14246210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14247587_14249552_14249623_14253664
Isoform_43628_5	chr14	-	1753	4	NNC	ENSMUSG00000021752.15	novel	1650	3	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	100.784699015057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGTTGTATTTATTGC	NA	False	NA	NA	False	AATAAA	-17	NA	14255631	14246207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14247587_14249552_14249623_14253664_14253768_14255430
Isoform_43629_6	chr14	-	1549	3	NNC	ENSMUSG00000021752.15	novel	3052	3	NA	NA	355	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	110.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTGTATTTATTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	14255278	14246206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14247587_14249552_14249623_14255179
Isoform_43633_66	chr14	-	2826	18	FSM	ENSMUSG00000033885.16	ENSMUST00000036682.9	2812	18	-19	5	-19	1	multi-exon	TRUE	canonical	3	68	junction_2	18.5091392369855	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTGTAGCTTTGCT	NA	False	NA	-5	True	AATAAA	-12	NA	14371581	14304660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
Isoform_43635_116	chr14	-	2832	18	FSM	ENSMUSG00000033885.16	ENSMUST00000225653.2	2765	18	-66	-1	-22	1	multi-exon	FALSE	canonical	3	52	junction_2	21.2781870861862	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTGTAGCTTTGCT	NA	False	NA	-5	True	AATAAA	-12	NA	14371584	14304660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
Isoform_43639_4	chr14	-	2167	11	FSM	ENSMUSG00000033885.16	ENSMUST00000225616.2	2121	11	-50	4	-9	-4	multi-exon	FALSE	canonical	3	88	junction_3	16.2283702200806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCCAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	14371571	14324109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
Isoform_43641_48	chr14	-	2438	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-30	-7	-30	7	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATATACCTTTATGTGT	NA	False	NA	-8	True	NA	NA	NA	14389436	14377931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
Isoform_43646_8	chr14	-	2059	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-74	416	-74	-416	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTCTGTAACTTGCCT	NA	False	NA	-10	True	NA	NA	NA	14389480	14378354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
Isoform_43647_66	chr14	-	1139	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	8	1254	8	26	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGTGCTCTTATTAT	NA	False	NA	-4	True	AATACA	-21	NA	14389398	14379192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
Isoform_4365_479	chr10	-	2800	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	1	-1	1	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417404	116321069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
Isoform_43651_8	chr14	-	3787	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-4	-1382	-4	1382	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGATTGATATTCCCTG	NA	False	NA	NA	False	AATAAA	-13	NA	14389410	14376556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
Isoform_43653_4	chr14	-	2463	6	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	155	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	87.8621647809795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTATATACCTTTA	NA	False	NA	-13	True	NA	NA	NA	14389251	14377936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389045
Isoform_43654_3	chr14	-	1178	6	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	157	26	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	91.0529516270615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGTGCTCTTATTAT	NA	False	NA	-4	True	AATACA	-21	NA	14389249	14379192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389072
Isoform_43658_33	chr14	-	2229	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	5	-8	5	8	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCCAGGTACTTTTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	14466866	14413001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
Isoform_43661_4	chr14	-	1335	8	FSM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	-14	637	3	-637	multi-exon	FALSE	canonical	3	7	junction_7	23.7589940005541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGTTGTTGCTTCCG	NA	False	NA	-4	True	ATTAAA	-14	NA	14466868	14413744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14466809
Isoform_43662_4	chr14	-	1195	8	FSM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	7	756	7	-756	multi-exon	FALSE	canonical	3	7	junction_7	23.7589940005541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGAAGTCTTCAAGTTC	NA	False	NA	NA	False	NA	NA	NA	14466847	14413863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14466809
Isoform_43663_3	chr14	-	3832	2	FSM	ENSMUSG00000109649.2	ENSMUST00000211339.2	676	2	12	-3168	12	3168	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGGGTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	14512473	14505968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_14509256_14511928
Isoform_4367_47	chr10	-	3155	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-354	-1	-343	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417759	116321069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
Isoform_43701_26	chr14	-	9011	47	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57	-4	at_least_one_novel_splicesite	TRUE	non_canonical	1	53	junction_1	134.338138105738	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGCTCCCTGTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	14651759	14518188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14518407_14518434_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_43702_13	chr14	-	9040	47	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	non_canonical	1	53	junction_1	134.338138105738	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGCTCCCTGTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	14651788	14518188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14518407_14518434_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_4371_22	chr10	-	3216	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-411	-5	-400	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGGCTTTGATTTGAA	NA	False	NA	-1	True	AATAAA	-23	NA	116417816	116321065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
Isoform_43754_64	chr14	-	9035	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	3	255	junction_40	115.220754303303	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGCTCCCTGTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	14651788	14518188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_43755_136	chr14	-	8978	47	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57	-4	at_least_one_novel_splicesite	FALSE	non_canonical	1	53	junction_1	125.594864318925	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGCTCCCTGTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	14651759	14518188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14518407_14518434_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_43759_9	chr14	-	2095	7	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	52473	-2	at_least_one_novel_splicesite	TRUE	non_canonical	1	4	junction_6	280.007985997225	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTCCCTGTCATTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	14532559	14518186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14518407_14518434_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14532451
Isoform_43762_4	chr14	-	3412	18	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	25	54536	25	9510	5prime_fragment	FALSE	canonical	3	255	junction_12	33.849964094577	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACCTTTTCTGTACA	NA	False	NA	NA	False	AATAAA	-7	NA	14651791	14572720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_43763_4	chr14	-	1258	6	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	56	69169	56	-5123	5prime_fragment	FALSE	canonical	3	266	junction_5	23.3272372989173	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	14651760	14587353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_43764_9	chr14	-	1486	4	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	55	77537	55	-13491	5prime_fragment	FALSE	canonical	3	266	junction_3	27.0678160675491	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	14651761	14595721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_43765_14	chr14	-	2090	8	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-5	1052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.6961751699056	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGCAGTGTATGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	17614202	17592869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17612629_17612744_17614118
Isoform_43766_3	chr14	-	1940	7	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	28	1049	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3284303119776	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACACAGCAGTGTATG	NA	False	NA	NA	False	AATAAA	-9	NA	17614169	17592872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17614118
Isoform_43767_3	chr14	+	2235	9	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14630	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.8423695919137	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGCAGTGTATGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	16042660	16063941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16056997_16057134_16057290_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
Isoform_43768_4	chr14	-	1954	7	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-5	1051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3284303119776	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17614202	17592870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17609286_17609438_17612629_17612744_17614118
Isoform_43769_6	chr14	-	1840	6	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-5	1051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.0565334984812	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17614202	17592870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17609286_17609438_17614118
Isoform_43770_14	chr14	-	2149	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-48	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGCAGTGTATGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	19137194	19114978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19132241_19132393_19135569_19135684_19137061
Isoform_43771_15	chr14	-	2098	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19137144	19114979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19132241_19132393_19135569_19135684_19137061
Isoform_43772_5	chr14	-	2066	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19137137	19114979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122562_19132241_19132393_19135569_19135684_19137061
Isoform_43773_22	chr14	-	1751	5	NIC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-51	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.6393596310755	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19137197	19114979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19137061
Isoform_43774_17	chr14	-	1981	7	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.46249406456535	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19137162	19114979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19132241_19132393_19135569_19135684_19137061
Isoform_43775_7	chr14	-	1852	6	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.46969384566991	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	19137144	19114976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19132241_19132393_19137061
Isoform_43781_2847	chr14	-	993	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	0	569	0	-569	multi-exon	FALSE	canonical	3	1848	junction_5	420.22365279378	2847	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCTTGTTTGTTTTGCT	1688	False	NA	-27	True	AATAAA	-13	NA	19873892	19861987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
Isoform_43788_19	chr14	-	3631	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	195	0	5	0	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACGGGGTCACTTTC	NA	False	NA	-4	True	AATAAA	-18	NA	20027122	19922626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
Isoform_43789_27	chr14	-	692	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	231	2903	41	193	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTCTGGTAATGAGAAT	NA	False	NA	-13	True	AATAAA	-35	NA	20027086	19925529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
Isoform_43790_43	chr14	-	643	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	271	2912	81	184	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGCTGACATTCTGGT	NA	False	NA	-22	True	AATAAA	-26	NA	20027046	19925538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
Isoform_43792_4	chr14	-	695	3	FSM	ENSMUSG00000043004.14	ENSMUST00000159028.8	458	3	5	-242	5	201	multi-exon	FALSE	canonical	3	12	junction_2	62	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATGAGAATTGTCTTTC	NA	False	NA	-5	True	AATAAA	-43	NA	20027122	19925521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_19926004_19941353_19941470_20027025
Isoform_43794_68	chr14	-	787	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	34	1494	34	330	multi-exon	FALSE	canonical	3	53	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGAGGCTGGTTTGT	5339	False	NA	NA	False	TATAAA	-8	NA	20133217	20127197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20127713_20132945
Isoform_43796_71	chr14	-	3412	5	FSM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	-20	0	-20	0	multi-exon	FALSE	canonical	3	94	junction_3	12.5573683548744	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20231897	20190124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
Isoform_43797_430	chr14	-	3364	5	FSM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	28	0	28	0	multi-exon	FALSE	canonical	3	94	junction_3	12.5573683548744	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20231849	20190124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
Isoform_43804_6	chr14	-	3514	4	NIC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	27	-3	intron_retention	FALSE	canonical	3	94	junction_2	12.9614813968157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGTGTGTGGTATGT	NA	False	NA	NA	False	AATAAA	-15	NA	20231850	20190127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_20192526_20194702_20195191_20196568_20196681_20231334
Isoform_43805_3	chr14	-	2370	5	FSM	ENSMUSG00000023387.9	ENSMUST00000024155.9	916	5	-73	-1381	-73	1	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATTGCAGGAGTCTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	20319340	20311442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20313042_20313316_20313483_20314227_20314395_20315233_20315349_20319017
Isoform_43812_103	chr14	-	2780	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	37	315	-14	-315	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGACTGGGTCTGACTGA	NA	False	NA	84	True	ATTAAA	-11	NA	20398152	20370234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
Isoform_43814_798	chr14	-	2663	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	69	400	-2	-400	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCAGTCTGTGACATTC	NA	False	NA	-1	True	AATAGA	-16	NA	20398120	20370319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
Isoform_4382_18	chr10	-	2604	15	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_13	166.140093331637	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417401	116321069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385011_116417357
Isoform_43832_773	chr14	-	1368	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	39	224	5	-224	multi-exon	TRUE	canonical	3	896	junction_2	62.1711347813437	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTGGTGGATTATTTA	NA	False	NA	-18	True	AATAAA	-13	NA	20438939	20434929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
Isoform_43836_31	chr14	-	1415	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	-9	225	-9	-225	multi-exon	FALSE	canonical	3	896	junction_2	62.1711347813437	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTGGTGGATTATTT	NA	False	NA	-19	True	AATAAA	-12	NA	20438987	20434930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
Isoform_43845_44	chr14	-	804	3	FSM	ENSMUSG00000049960.5	ENSMUST00000224286.2	801	3	5	-8	5	8	multi-exon	FALSE	canonical	3	91	junction_2	790	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGCATAGCCTGAGCA	8683	False	NA	-28	True	AATAAA	-22	NA	20443546	20441286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20441529_20441960_20442222_20443245
Isoform_43847_544	chr14	-	546	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	112	1914	-39	9	multi-exon	TRUE	canonical	3	1591	junction_2	40	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCATAGCCTGAGCAG	8639	False	NA	-27	True	AATAAA	-23	NA	20443590	20441285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20441529_20441960_20442222_20443548
Isoform_43848_387	chr14	-	649	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	0	1923	0	0	multi-exon	FALSE	canonical	3	1591	junction_2	40	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGGTCCTCTGGCATAG	8527	False	NA	-36	True	AATAAA	-14	NA	20443702	20441294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20441529_20441960_20442222_20443548
Isoform_43849_12	chr14	-	728	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	-78	1922	-78	1	multi-exon	FALSE	canonical	3	1591	junction_2	40	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTCCTCTGGCATAGC	8449	False	NA	-35	True	AATAAA	-15	NA	20443780	20441293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20441529_20441960_20442222_20443548
Isoform_4385_68	chr10	-	2674	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	14	5	-1	0	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417402	116321070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
Isoform_43858_86	chr14	-	1799	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	36	892	33	360	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTTTAATGTTAAAAG	8236	False	NA	-19	True	AATAAA	-18	NA	20529943	20506236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
Isoform_43859_40	chr14	-	1827	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	8	892	5	360	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTTTAATGTTAAAAG	8208	False	NA	-19	True	AATAAA	-18	NA	20529971	20506236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
Isoform_43861_211	chr14	-	2641	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	194	16	2	1	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTTGACCTAGAGTAA	8172	False	NA	0	True	AATAAA	-25	NA	20530007	20505343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
Isoform_43863_866	chr14	-	1750	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	192	909	0	360	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTTTAATGTTAAAAG	8170	False	NA	-19	True	AATAAA	-18	NA	20530009	20506236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
Isoform_43864_72	chr14	-	1881	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	61	909	49	360	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTTTAATGTTAAAAG	8039	False	NA	-19	True	AATAAA	-18	NA	20530140	20506236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
Isoform_43874_53	chr14	-	3152	14	FSM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-15	161	11	1	multi-exon	FALSE	canonical	3	82	junction_1	49.8631262652749	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTTGGGTTTTATT	NA	False	NA	0	True	AATAAA	-26	NA	20596630	20550096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_43875_9	chr14	-	3817	14	FSM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-15	-504	11	0	multi-exon	FALSE	canonical	3	82	junction_1	49.8631262652749	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTGTCTCTAAAATTAC	NA	False	NA	-2	True	ATTAAA	-16	NA	20596630	20549431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_43880_44	chr14	-	3147	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	19	665	-7	1	multi-exon	FALSE	canonical	3	82	junction_1	50.211858850582	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTTGGGTTTTATT	NA	False	NA	0	True	AATAAA	-26	NA	20596622	20550096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_43883_5	chr14	-	3336	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	-2	497	-2	7	multi-exon	FALSE	canonical	3	82	junction_1	50.211858850582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGTTATACTTTTTT	NA	False	NA	NA	False	CATAAA	-17	NA	20596643	20549928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_43884_3	chr14	-	3503	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	11	317	11	187	multi-exon	FALSE	canonical	3	82	junction_1	50.211858850582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGGGTTAGAAGAGAT	NA	False	NA	-1	True	AATAAA	-17	NA	20596630	20549748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_43885_14	chr14	-	3122	13	NIC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	55.7529271777625	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTTGGGTTTTATT	NA	False	NA	0	True	AATAAA	-26	NA	20596630	20550096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_20551731_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_43886_6	chr14	-	3114	13	FSM	ENSMUSG00000021816.12	ENSMUST00000022355.11	3074	13	-39	-1	-4	1	multi-exon	FALSE	canonical	3	28	junction_1	56.1047507396259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTTGGGTTTTATT	NA	False	NA	0	True	AATAAA	-26	NA	20596619	20550096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20551731_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_43887_54	chr14	-	2432	12	ISM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-7	7804	-7	-1	5prime_fragment	FALSE	canonical	3	105	junction_2	32.0745515869534	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTAATCTGGCTCGT	NA	False	NA	-8	True	AATAAA	-18	NA	20596622	20557739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_43890_45	chr14	-	2434	12	FSM	ENSMUSG00000021816.12	ENSMUST00000161989.2	2322	12	-114	2	-7	-2	multi-exon	FALSE	canonical	3	102	junction_2	32.8535442821749	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGTAATCTGGCTCG	NA	False	NA	-9	True	AATAAA	-17	NA	20596622	20557740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_43892_4	chr14	-	6622	22	NIC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	123	-6	combination_of_known_junctions	FALSE	canonical	2	10	junction_12	21.0907766968883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATCTCTTGTCTTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	20691008	20598985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20631524_20631696_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
Isoform_43894_63	chr14	-	6458	21	FSM	ENSMUSG00000034235.18	ENSMUST00000022356.12	6580	21	120	2	120	-2	multi-exon	TRUE	canonical	3	44	junction_20	12.721929885045	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTCTTTTACTTT	NA	False	NA	0	True	AATAAA	-21	NA	20691011	20598981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
Isoform_43896_3	chr14	-	1623	8	ISM	ENSMUSG00000034235.18	ENSMUST00000022356.12	6580	21	117	39072	117	-4759	5prime_fragment	FALSE	canonical	3	44	junction_7	16.2643970759724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGTTTCTGTGTGCAA	NA	False	NA	NA	False	ATTAAA	-18	NA	20691014	20638051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
Isoform_43897_3	chr14	-	560	3	FSM	ENSMUSG00000097577.3	ENSMUST00000180987.2	1554	3	4	990	4	-990	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTCCAGCTCGCTCT	NA	False	NA	NA	False	NA	NA	NA	20753076	20738293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20738682_20738832_20738908_20752979
Isoform_43898_3	chr14	-	1505	2	NIC	ENSMUSG00000097577.3	novel	1554	3	NA	NA	-2	8	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTTCTTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	20753098	20737295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_20738682_20752979
Isoform_43899_8	chr14	-	3612	15	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	220	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	18.1518537873785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9643	False	NA	-1	True	AATAAA	-15	NA	20784410	20773797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778255_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
Isoform_43900_158	chr14	-	3686	15	FSM	ENSMUSG00000039308.7	ENSMUST00000223679.2	3907	15	221	0	221	0	multi-exon	FALSE	canonical	3	47	junction_10	9.23281636117516	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	-1	True	AATAAA	-15	NA	20784409	20773797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
Isoform_43901_6	chr14	-	3907	15	FSM	ENSMUSG00000039308.7	ENSMUST00000223679.2	3907	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	9.23281636117516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9423	False	NA	-1	True	AATAAA	-15	NA	20784630	20773797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
Isoform_43902_17	chr14	-	3649	15	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	16.2331545339299	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	-1	True	AATAAA	-15	NA	20784409	20773797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_20774429_20774528_20774632_20774815_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
Isoform_43903_7	chr14	-	3786	14	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	0	intron_retention	FALSE	canonical	3	47	junction_9	9.4530919145834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	-1	True	AATAAA	-15	NA	20784409	20773797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
Isoform_43905_5	chr14	-	3706	20	NIC	ENSMUSG00000021820.19	novel	1937	22	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	10.4229131778775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTATTGCTGTTGGAG	NA	False	NA	2	True	AATAAA	-20	NA	20844145	20784940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
Isoform_43907_16	chr14	-	3611	20	FSM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	1	-8	1	0	multi-exon	FALSE	canonical	2	6	junction_6	9.18507762457831	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	0	True	AATAAA	-18	NA	20844097	20784942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
Isoform_43909_27	chr14	-	3568	19	FSM	ENSMUSG00000021820.19	ENSMUST00000100837.11	3564	19	-4	0	-1	0	multi-exon	FALSE	canonical	3	16	junction_6	6.2610396328366	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	0	True	AATAAA	-18	NA	20844123	20784942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
Isoform_43919_177	chr14	-	3126	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	239	3367	11	1205	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTTTAAAGTTTGAT	NA	False	NA	-10	True	AATAAA	-15	NA	21102279	21084876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
Isoform_43922_18	chr14	-	3369	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	-10	3373	3	1199	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAAATGATTTTTAAAG	NA	False	NA	-16	True	AATAAA	-9	NA	21102528	21084882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
Isoform_43926_14	chr14	-	4193	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	239	2300	11	2272	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAGCTTCAATACAAAA	NA	False	NA	1	True	AATAAA	-23	NA	21102279	21083809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
Isoform_43930_39	chr14	-	3085	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	17	1199	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAAATGATTTTTAAAG	NA	False	NA	-16	True	AATAAA	-9	NA	21102559	21084882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
Isoform_43933_25	chr14	-	2678	7	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	11	1205	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	106.531163932855	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTTTAAAGTTTGAT	NA	False	NA	-10	True	AATAAA	-15	NA	21102279	21084876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102207
Isoform_43938_362	chr14	-	920	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	70	1324	-13	0	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898975	21897246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_43939_18	chr14	-	1041	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	70	1203	-13	121	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGAGTAGAGTTCCAA	NA	False	NA	-7	True	AATAAA	-15	NA	21898975	21897125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_43940_20	chr14	-	952	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	38	1324	38	0	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21899007	21897246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_43942_30	chr14	-	993	6	FSM	ENSMUSG00000021773.12	ENSMUST00000022295.4	981	6	-13	1	-13	-1	multi-exon	FALSE	canonical	3	266	junction_1	9.09065454189081	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGAGCATCCTCTTC	NA	False	NA	-11	True	AATAAA	-16	NA	21898975	21897247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_21897496_21897681_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_43947_11	chr14	-	1181	5	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	276	junction_4	6.05702071979286	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898976	21897246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_43948_5	chr14	-	1302	4	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-13	3	intron_retention	FALSE	canonical	3	276	junction_3	6.94422221866655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACCTTCTGAGCATCCTCT	NA	False	NA	-13	True	AATAAA	-14	NA	21898975	21897249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_43950_4	chr14	-	1899	4	NNC	ENSMUSG00000021782.15	novel	6336	27	NA	NA	7511	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.7678690770727	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCCTGTGTGTAGACCC	NA	False	NA	-7	True	AATAAA	-13	NA	24188745	24184023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_24185742_24186636_24186747_24187191_24187233_24188715
Isoform_43951_53	chr14	-	2493	6	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	33207	1	1606	-1	3prime_fragment	TRUE	canonical	3	145	junction_4	6.05309838016862	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGTGTGTAGACCCTG	NA	False	NA	-5	True	AATAAA	-15	NA	24194650	24184021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369
Isoform_43963_37	chr14	-	7611	32	FSM	ENSMUSG00000021782.15	ENSMUST00000090398.11	7851	32	241	-1	241	-1	multi-exon	FALSE	canonical	3	63	junction_27	24.1232527147577	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGTGTGTAGACCCTG	NA	False	NA	-5	True	AATAAA	-15	NA	24295747	24184021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
Isoform_43975_302	chr14	-	4639	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	46	2	3	-2	multi-exon	FALSE	canonical	3	105	junction_23	15.9947560851118	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATATTAAGTGTTTTTTG	NA	False	NA	-5	True	AATACA	-24	NA	24537074	24498765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
Isoform_43978_66	chr14	-	4554	4	FSM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	-1	3	-1	-1	multi-exon	FALSE	canonical	3	42	junction_3	4.78423336480244	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGGCTCGTGAGTTTGT	NA	False	NA	-4	True	ATTAAA	-15	NA	25769464	25712068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25715827_25720050_25720216_25757434_25757636_25769034
Isoform_43980_4	chr14	-	3442	4	FSM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	-33	1147	-33	-1145	multi-exon	FALSE	canonical	3	42	junction_3	4.78423336480244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGCATGCGTTTAAATG	NA	False	NA	NA	False	ATTAAA	-14	NA	25769496	25713212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25715827_25720050_25720216_25757434_25757636_25769034
Isoform_43981_24	chr14	-	550	4	FSM	ENSMUSG00000095304.10	ENSMUST00000183431.8	536	4	-13	-1	-11	1	multi-exon	FALSE	canonical	3	49	junction_3	71.4624998785299	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25902911	25888826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25902704
Isoform_43982_7	chr14	-	925	4	FSM	ENSMUSG00000095304.10	ENSMUST00000183431.8	536	4	-13	-376	-11	376	multi-exon	FALSE	canonical	3	49	junction_3	71.4624998785299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCAAAGAGATGCATTTC	NA	False	NA	NA	False	NA	NA	NA	25902911	25888451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25902704
Isoform_43983_28	chr14	-	536	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	122	897	122	1	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25903402	25888826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
Isoform_43984_33	chr14	-	503	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	155	897	155	1	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25903369	25888826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
Isoform_43985_10	chr14	-	900	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	149	506	149	392	multi-exon	TRUE	canonical	3	143	junction_3	28.7170100579198	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGTTTCTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	25903375	25888435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
Isoform_43986_5	chr14	-	655	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	3	897	3	1	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25903521	25888826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
Isoform_43988_10	chr14	-	411	4	NNC	ENSMUSG00000095304.10	novel	439	4	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	82.174610839764	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25902911	25888826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_25888951_25889319_25889444_25891184_25891280_25902843
Isoform_43989_4	chr14	-	410	4	NNC	ENSMUSG00000095304.10	novel	1555	4	NA	NA	-448	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	90.1122756466744	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25903972	25888826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_25888951_25889319_25889444_25891184_25891280_25903905
Isoform_4399_75	chr10	-	2389	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	144.203246804255	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417404	116321069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
Isoform_43990_4	chr14	-	1280	4	FSM	ENSMUSG00000072676.13	ENSMUST00000100811.6	1108	4	1	-173	1	173	multi-exon	FALSE	canonical	3	8	junction_3	63.5627424063989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACATGCATCTGAGTT	NA	False	NA	-5	True	AGTAAA	-18	NA	25927673	25924420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927468
Isoform_43991_74	chr14	-	1252	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	29	866	0	4	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTTGATCGTGATGTC	NA	False	NA	-9	True	NA	NA	NA	25928067	25924589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
Isoform_43992_42	chr14	-	1403	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	47	697	18	173	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACATGCATCTGAGTT	NA	False	NA	-5	True	AGTAAA	-18	NA	25928049	25924420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
Isoform_43994_10	chr14	-	1299	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	-20	868	-20	2	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTCTTGATCGTGATG	NA	False	NA	-11	True	NA	NA	NA	25928116	25924591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
Isoform_43996_5	chr14	-	1502	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	-44	689	-44	181	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTGAGTTCTTTTGGT	NA	False	NA	3	True	AGTAAA	-26	NA	25928140	25924412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
Isoform_44_3	ERCC-00013	+	790	1	FSM	ERCC-00013A	EF011062	792	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00013_+_0_800
Isoform_44001_24	chr14	-	5550	25	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-14	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	61.4828340993556	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTGAGTTGTACATC	NA	False	NA	-2	True	AATAAA	-20	NA	26256100	26134325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
Isoform_44003_10	chr14	-	5447	24	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	63.4664968253461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGTTTGAGTTGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	26256051	26134328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
Isoform_44004_7	chr14	-	5402	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_12	61.0146304091645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256051	26134322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
Isoform_44007_121	chr14	-	5441	24	FSM	ENSMUSG00000021870.18	ENSMUST00000102956.8	5476	24	34	1	-2	-1	multi-exon	FALSE	canonical	3	93	junction_11	42.4199902941944	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGAGTTGTACATCAT	NA	False	NA	0	True	AATAAA	-22	NA	26256052	26134323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
Isoform_44008_8	chr14	-	5412	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	54.2318256108985	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGTTTGAGTTGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	26256079	26134328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
Isoform_44010_21	chr14	-	5415	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	49.6311394187157	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTGAGTTGTACATCA	NA	False	NA	-1	True	AATAAA	-21	NA	26256078	26134324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
Isoform_44013_191	chr14	-	5339	22	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	32.5658586159231	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256051	26134322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
Isoform_44014_5	chr14	-	5446	22	NNC	ENSMUSG00000021870.18	novel	4501	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	56.0560134507524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26256051	26134329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26255888
Isoform_44019_5	chr14	-	2705	3	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	16	-72163	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	107.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	AGTAAA	-6	NA	26256070	26253117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_26254406_26254430_26255780_26256002
Isoform_44020_108	chr14	-	3337	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	236	4152	236	-4152	multi-exon	FALSE	canonical	3	278	junction_2	18	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTGTGCCTTCATAAA	NA	False	NA	NA	False	AATAAA	-25	NA	26390802	26385264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_26387123_26387532_26387612_26389402
Isoform_44021_106	chr14	-	2669	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	-6	5062	-6	-5062	multi-exon	FALSE	canonical	3	278	junction_2	18	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATAGCTTCTTCGTT	NA	False	NA	-8	True	ATTAAA	-15	NA	26391044	26386174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_26387123_26387532_26387612_26389402
Isoform_44022_748	chr14	-	2437	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	226	5062	226	-5062	multi-exon	FALSE	canonical	3	278	junction_2	18	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATAGCTTCTTCGTT	NA	False	NA	-8	True	ATTAAA	-15	NA	26390812	26386174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_26387123_26387532_26387612_26389402
Isoform_44025_14	chr14	-	3569	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	-6	4162	-6	-4162	multi-exon	FALSE	canonical	3	278	junction_2	18	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATGTTACCAAATTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	26391044	26385274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_26387123_26387532_26387612_26389402
Isoform_44031_107	chr14	-	2396	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	689	4557	-38	-4557	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGCTTTCCTAAACAAG	NA	False	NA	-2	True	AATAAA	-21	NA	26692500	26645501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
Isoform_44034_53	chr14	-	3126	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	663	3853	-64	-3853	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATCTTTTGAATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	26692526	26644797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
Isoform_44037_60	chr14	-	6931	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	713	-2	-14	2	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTATGAAATATTTAG	NA	False	NA	-10	True	AATAAA	-22	NA	26692476	26640942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
Isoform_44038_6	chr14	-	4376	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	663	2603	-64	-2603	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGTAGTCAGCTCTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	26692526	26643547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
Isoform_44041_9	chr14	-	2351	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-65	-4557	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	68.3302824522188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGCTTTCCTAAACAAG	NA	False	NA	-2	True	AATAAA	-21	NA	26692527	26645501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
Isoform_44043_7	chr14	-	6865	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-20	2	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	68.3302824522188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTATGAAATATTTAG	NA	False	NA	-10	True	AATAAA	-22	NA	26692482	26640942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
Isoform_44047_5	chr14	-	2232	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-65	-4559	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	76.9144167240447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCTGCTTTCCTAAACA	NA	False	NA	-4	True	AATAAA	-19	NA	26692527	26645503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
Isoform_44052_8	chr14	-	1617	16	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	707	21190	-20	10948	5prime_fragment	FALSE	canonical	3	283	junction_1	27.6115917686757	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTCTGCTGCTGTCCTC	NA	False	NA	NA	False	AGTAAA	-22	NA	26692482	26662134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
Isoform_44053_7	chr14	-	3185	16	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	663	19666	-64	12472	5prime_fragment	FALSE	canonical	3	283	junction_1	27.6115917686757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	26692526	26660610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
Isoform_44058_99	chr14	-	2954	18	FSM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	-13	1321	-13	1	multi-exon	FALSE	canonical	3	74	junction_15	12.2471661858887	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTCTTGTCA	7513	False	NA	NA	False	AATAAA	-16	NA	27230430	27204367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
Isoform_44060_31	chr14	-	2895	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_15	19.957767911267	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTCTTGTCA	7546	False	NA	NA	False	AATAAA	-16	NA	27230397	27204367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228607_27228673_27230378
Isoform_44061_5	chr14	-	3933	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	0	intron_retention	FALSE	canonical	3	74	junction_14	12.6229887011753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7513	False	NA	NA	False	AATAAA	-15	NA	27230430	27204368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
Isoform_44062_3	chr14	-	3035	19	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.3637067127824	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7541	False	NA	NA	False	AATAAA	-26	NA	27230402	27204357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27209291_27209391_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
Isoform_44063_5	chr14	-	2001	11	ISM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	-13	10295	-13	-8973	5prime_fragment	FALSE	canonical	3	74	junction_8	15.0283066245003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTGTGATGAAATTCC	7513	False	NA	NA	False	ATTAAA	-17	NA	27230430	27213341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
Isoform_44065_3	chr14	-	4333	11	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-16	-6644	intron_retention	FALSE	canonical	3	74	junction_8	15.0283066245003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCCTATGACTCTATG	7510	False	NA	NA	False	NA	NA	NA	27230433	27211012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
Isoform_44067_9	chr14	-	2611	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112211.9	2851	18	7	233	7	3	multi-exon	FALSE	canonical	3	7	junction_8	28.1631431086409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATAGGCTGTATATATT	5430	False	NA	-4	True	NA	NA	NA	30348158	30317545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324615_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
Isoform_44069_5	chr14	-	2390	15	FSM	ENSMUSG00000021948.18	ENSMUST00000112207.8	2139	15	-11	-240	-11	2	multi-exon	TRUE	canonical	3	87	junction_13	15.3483363453968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGGGACATTTATG	412	False	NA	-1	True	AATAAA	-19	NA	30329790	30317308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564
Isoform_44072_109	chr14	-	2775	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	1	1	-1	1	multi-exon	FALSE	canonical	3	76	junction_17	15.936508975905	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCTGTGGGGACATTT	5422	False	NA	-4	True	AATAAA	-16	NA	30348166	30317311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
Isoform_44073_4	chr14	-	3021	17	NIC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	-1	1	intron_retention	FALSE	canonical	3	76	junction_16	15.7806002341483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCTGTGGGGACATTT	5422	False	NA	-4	True	AATAAA	-16	NA	30348166	30317311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
Isoform_44076_16	chr14	-	698	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228767.2	1008	4	310	0	1	0	multi-exon	FALSE	canonical	3	32	junction_2	828.969775618441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	30723319	30721782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30722180_30722634_30722718_30722800_30722861_30723161
Isoform_44078_899	chr14	-	703	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228736.2	702	4	0	-1	0	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	30723320	30721782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
Isoform_44079_107	chr14	-	892	4	FSM	ENSMUSG00000021917.17	ENSMUST00000226782.2	949	4	57	0	57	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	30723509	30721782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
Isoform_44082_18	chr14	-	1788	15	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	239.182589718587	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741020	30734390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_30734592_30734679_30734747_30735123_30735213_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
Isoform_44091_41	chr14	-	1794	15	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-17	0	combination_of_known_junctions	TRUE	canonical	3	108	junction_10	218.114789100808	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741018	30734389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
Isoform_44093_16	chr14	-	1869	15	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	231.923511757912	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741018	30734390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
Isoform_44101_929	chr14	-	1856	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	91	0	-17	0	multi-exon	FALSE	canonical	3	775	junction_10	82.9678140200482	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741018	30734389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
Isoform_44114_45	chr14	-	394	2	FSM	ENSMUSG00000058351.12	ENSMUST00000049732.11	311	2	-71	-12	4	12	multi-exon	FALSE	canonical	3	152	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTGTGTTTTTATAA	NA	False	NA	1	True	AATAAA	-30	NA	30850866	30846449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30846567_30850589
Isoform_44116_11	chr14	-	502	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	-58	-18	-5	18	multi-exon	FALSE	canonical	3	53	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTTGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	30850918	30846617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30846791_30850589
Isoform_44117_11	chr14	-	432	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	12	-18	12	18	multi-exon	FALSE	canonical	3	53	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTTGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	30850848	30846617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30846791_30850589
Isoform_4413_11	chr10	-	2809	11	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	25	2	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	85.4016978753936	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGTTGGGTTATTTTCT	NA	False	NA	-3	True	ATTAAA	-18	NA	116786311	116741686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775382_116786164
Isoform_4414_47	chr10	-	1821	11	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	20	2	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	85.4016978753936	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTGTCTTTCTTAGC	NA	False	NA	-5	True	AATAAA	-12	NA	116786316	116742679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775382_116786164
Isoform_44158_1989	chr14	-	5457	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	101	1	0	-1	multi-exon	FALSE	canonical	3	883	junction_8	71.9902076674321	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTCTTCAAGGTTAT	9422	False	NA	-5	True	AATAAA	-16	NA	30928657	30892887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
Isoform_44159_35	chr14	-	5547	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	10	2	10	-2	multi-exon	FALSE	canonical	3	883	junction_8	71.9902076674321	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9331	False	NA	-6	True	AATAAA	-15	NA	30928748	30892888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
Isoform_44166_54	chr14	-	5462	21	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	223.150061617737	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9422	False	NA	-6	True	AATAAA	-15	NA	30928657	30892888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896850_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
Isoform_44167_121	chr14	-	2628	14	FSM	ENSMUSG00000021910.16	ENSMUST00000172142.8	2780	14	144	8	18	-8	multi-exon	TRUE	canonical	3	57	junction_1	267.283529621824	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTGTGCACATCTT	9440	False	NA	-5	True	AATAAA	-12	NA	30928639	30905277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30906355_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
Isoform_4417_21	chr10	-	1870	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	-27	1	-5	-1	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCGTGTGTCTTTCTT	NA	False	NA	-8	True	AATAAA	-9	NA	116786363	116742682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
Isoform_44172_27	chr14	-	2385	11	FSM	ENSMUSG00000021910.16	ENSMUST00000165981.8	2415	11	0	30	0	6	multi-exon	FALSE	canonical	3	935	junction_6	81.5207948930824	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	9422	False	NA	NA	False	AATGAA	-5	NA	30928657	30907676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
Isoform_44175_11	chr14	-	2110	11	FSM	ENSMUSG00000021902.8	ENSMUST00000022459.5	2084	11	-26	0	-26	0	multi-exon	FALSE	canonical	3	5	junction_2	8.85945822271317	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGTCTCCTTGTGAATT	NA	False	NA	-3	True	AATAAA	-14	NA	30973300	30959651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30960111_30960293_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
Isoform_44176_24	chr14	-	2004	10	FSM	ENSMUSG00000021902.8	ENSMUST00000226565.2	1971	10	-39	6	-37	0	multi-exon	FALSE	canonical	3	15	junction_2	5.27280467453541	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGTCTCCTTGTGAATT	NA	False	NA	-3	True	AATAAA	-14	NA	30973311	30959651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_30960111_30960293_30960440_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
Isoform_44178_5	chr14	-	3543	20	ISM	ENSMUSG00000019027.9	ENSMUST00000048603.8	12872	78	54328	10	-57	-10	3prime_fragment	FALSE	canonical	0	0	junction_4	1.18391809254758	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTTGTACCGTGGCT	9824	False	NA	NA	False	ATTAAA	-13	NA	30991525	30982341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_30982505_30983002_30983238_30983445_30983798_30984109_30984241_30984369_30984541_30985075_30985253_30985324_30985505_30985806_30985978_30986271_30986404_30986479_30986639_30986867_30987013_30987219_30987417_30987835_30987988_30988271_30988468_30988596_30988823_30989411_30989573_30989668_30989819_30989942_30990063_30990741_30990868_30991326
Isoform_4418_108	chr10	-	2821	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	20	-997	20	4	multi-exon	TRUE	canonical	3	251	junction_7	35.031985384788	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGGTTATTTTCTGT	NA	False	NA	-1	True	ATTAAA	-20	NA	116786316	116741684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
Isoform_44180_10	chr14	-	2715	9	FSM	ENSMUSG00000021892.15	ENSMUST00000091903.5	2684	9	-25	-6	-12	6	multi-exon	FALSE	canonical	1	5	junction_3	1.69096865730859	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCACTGTTGTCTGTCT	5883	False	NA	NA	False	AATAAA	-32	NA	31158047	31095735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31097159_31097560_31097822_31099347_31099568_31100234_31100278_31101345_31101477_31109675_31109841_31133497_31133627_31156039_31156103_31157767
Isoform_44181_4	chr14	-	2782	6	FSM	ENSMUSG00000021891.9	ENSMUST00000227777.2	2762	6	-21	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_1	112.925816357465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAATTAGCTTATGTG	NA	False	NA	NA	False	NA	NA	NA	31216986	31195535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31197374_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
Isoform_44182_5	chr14	-	2307	6	NIC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	2	787	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	104.286911930501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAACCGGGTGAATGTGT	NA	False	NA	-4	True	NA	NA	NA	31216976	31200754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215193_31215922_31216858
Isoform_44184_138	chr14	-	1744	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	25	2177	6	588	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTGTAAGTCCTGAAA	NA	False	NA	-1	True	AATAAA	-29	NA	31216972	31200953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
Isoform_44185_115	chr14	-	1962	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	10	1974	0	791	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGTGAATGTGTTTGT	NA	False	NA	0	True	NA	NA	NA	31216987	31200750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
Isoform_44186_11	chr14	-	3920	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	23	3	4	-3	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATTGTTTCTTGATGT	NA	False	NA	NA	False	NA	NA	NA	31216974	31198779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
Isoform_44188_10	chr14	-	3086	5	NIC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	-5	792	intron_retention	FALSE	canonical	3	247	junction_4	13.3603892158874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGTGAATGTGTTTGTT	NA	False	NA	1	True	NA	NA	NA	31216970	31200749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31215922_31216858
Isoform_4419_407	chr10	-	1826	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	18	0	18	0	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	False	NA	-7	True	AATAAA	-10	NA	116786318	116742681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
Isoform_44192_6	chr14	-	2109	7	NNC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	0	787	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	123.583642391162	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAACCGGGTGAATGTGT	NA	False	NA	-4	True	NA	NA	NA	31216987	31200754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31211125_31211277_31214278_31214414_31215553_31215922_31216858
Isoform_44193_8	chr14	-	1902	7	NNC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	-1	588	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	123.583642391162	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTGTAAGTCCTGAAA	NA	False	NA	-1	True	AATAAA	-29	NA	31216979	31200953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31211125_31211277_31214278_31214414_31215553_31215922_31216858
Isoform_44195_15	chr14	-	1820	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228181.2	793	5	-38	-989	0	791	multi-exon	FALSE	canonical	3	35	junction_1	108.841628065736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGTGAATGTGTTTGT	NA	False	NA	0	True	NA	NA	NA	31216987	31200750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31201768_31209527_31209699_31214278_31214414_31215553_31215922_31216858
Isoform_44197_12	chr14	-	2387	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228727.2	2388	5	0	1	0	0	multi-exon	FALSE	canonical	3	247	junction_4	24.3823706804732	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGACCTCTTTATATGT	NA	False	NA	NA	False	NA	NA	NA	31216987	31203305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
Isoform_44198_40	chr14	-	2285	17	FSM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	-296	655	-3	115	multi-exon	FALSE	canonical	3	36	junction_9	6.10199762372946	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGTTTTGTTTTGTTT	6649	False	NA	NA	False	AGTAAA	-31	NA	31363217	31329810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
Isoform_44200_5	chr14	-	1939	17	NIC	ENSMUSG00000021884.19	novel	2644	17	NA	NA	-5	115	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	13.265910259006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGTTTTGTTTTGTTT	6618	False	NA	NA	False	AGTAAA	-31	NA	31363248	31329810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31363122
Isoform_44201_3	chr14	-	2169	15	NIC	ENSMUSG00000021884.19	novel	1699	16	NA	NA	14	109	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	13.7716434482347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATAACTTTGGTTTTGTT	6637	False	NA	NA	False	AGTAAA	-25	NA	31363229	31329816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31362450_31362556_31362745
Isoform_44209_110	chr14	-	5495	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-31	1248	-31	-1248	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTATTTGTATCTGTG	5249	False	NA	NA	False	AATAAA	-27	NA	31552639	31421972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
Isoform_44211_4	chr14	-	5627	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-60	1145	-60	-1145	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAATCTCCATCTTTTC	5220	False	NA	NA	False	NA	NA	NA	31552668	31421869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
Isoform_44212_53	chr14	-	6738	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-31	5	-31	-5	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAAGTGTCTTTCTT	5249	False	NA	NA	False	AATAAA	-14	NA	31552639	31420729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
Isoform_44223_5	chr14	-	777	2	FSM	ENSMUSG00000021905.15	ENSMUST00000144149.2	751	2	-23	-3	-23	-1	multi-exon	FALSE	canonical	3	570	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGTGTCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31807266	31804829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31805204_31806863
Isoform_44224_43	chr14	-	2949	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	5	-1	5	1	multi-exon	FALSE	canonical	3	570	junction_1	6	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATGTTTTCTTGAAGC	NA	False	NA	-5	True	AATAAA	-14	NA	31807561	31802524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31805204_31806863_31806939_31807366
Isoform_44226_402	chr14	-	645	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	4	2304	4	-1	multi-exon	FALSE	canonical	3	570	junction_1	6	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGTGTCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31807562	31804829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31805204_31806863_31806939_31807366
Isoform_44229_6	chr14	-	518	3	FSM	ENSMUSG00000021905.15	ENSMUST00000167796.2	591	3	69	4	-14	0	multi-exon	FALSE	canonical	3	8	junction_2	281	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCCTGAGTGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	31807580	31804832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31805204_31806863_31806939_31807508
Isoform_44231_20	chr14	-	574	2	FSM	ENSMUSG00000021905.15	ENSMUST00000124303.9	809	2	120	115	0	-1	multi-exon	FALSE	canonical	3	69	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGTGTCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31807566	31804829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31805204_31807366
Isoform_44232_6	chr14	-	2305	2	FSM	ENSMUSG00000021905.15	ENSMUST00000112000.2	486	2	4	-1823	4	-1	multi-exon	FALSE	canonical	3	582	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGTGTCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31807562	31804829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31806939_31807366
Isoform_44234_3023	chr14	-	1143	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	27	3	-2	-3	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	3023	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAGTATCTCCATTTA	NA	False	NA	NA	False	AATAAA	-37	NA	31923828	31902121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
Isoform_44255_4	chr14	-	1933	11	ISM	ENSMUSG00000051506.18	ENSMUST00000130509.10	10158	62	207839	23	46110	-23	3prime_fragment	FALSE	canonical	3	5	junction_6	4.28485705712571	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAAGGCTGCTTGAGCG	8585	False	NA	-23	True	ATTAAA	-14	NA	32699184	32681526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_32681962_32682698_32682811_32686495_32686581_32688320_32688504_32689429_32689610_32692779_32692939_32693534_32693720_32695492_32695644_32696111_32696325_32697111_32697204_32699046
Isoform_44256_7	chr14	-	2889	12	FSM	ENSMUSG00000021936.15	ENSMUST00000022504.12	2587	12	-45	-257	-32	257	multi-exon	FALSE	canonical	0	0	junction_1	3.14655787270487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAAATGATGTCTATA	NA	False	NA	-11	True	AGTAAA	-21	NA	33169147	33102748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_33104277_33105830_33105909_33108518_33108583_33109128_33109254_33110756_33110940_33112198_33112271_33114898_33115065_33124580_33124720_33124821_33124881_33130004_33130135_33132812_33132982_33168971
Isoform_44257_11	chr14	-	2896	12	NIC	ENSMUSG00000021936.15	novel	2587	12	NA	NA	-28	263	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.14655787270487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATGTCTATAATGCCC	NA	False	NA	-5	True	AGTAAA	-27	NA	33169143	33102742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_33104282_33105830_33105909_33108518_33108583_33109128_33109254_33110756_33110940_33112198_33112271_33114898_33115065_33124580_33124720_33124821_33124881_33130004_33130135_33132812_33132982_33168971
Isoform_44258_3	chr14	-	3072	2	FSM	ENSMUSG00000071531.4	ENSMUST00000226511.2	438	2	-6	-2628	-6	2628	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTAGAGCTTTGACAGG	NA	False	NA	NA	False	AATAAA	-18	NA	33923616	33914744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_33917775_33923574
Isoform_44259_15	chr14	-	3585	12	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	25.9930060523281	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032501	33958989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_33995443_33995534_34030996_34031052_34032123
Isoform_44261_33	chr14	-	3494	11	FSM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	-177	0	-50	0	multi-exon	FALSE	canonical	3	23	junction_8	23.9376272842569	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032500	33958989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_34030996_34031052_34032123
Isoform_44264_25	chr14	-	3546	11	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-86	-8	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	20.0858158908221	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTCTGTGAAGCT	NA	False	NA	-22	True	AATATA	-25	NA	34032536	33958997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
Isoform_44266_6	chr14	-	3410	10	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-39	-7	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	24.9131825880731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATTCTGTGAAGCTT	NA	False	NA	-21	True	AATATA	-26	NA	34032489	33958996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_34030996_34031052_34032123
Isoform_44267_3	chr14	-	3386	10	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	31.7587355533972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032500	33958989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33989457_33990910_33991427_33991494_34030996_34031052_34032123
Isoform_44268_3	chr14	-	3606	11	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	27.4082104486958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTCTGTGAAGCTTTT	NA	False	NA	-19	True	AATATA	-28	NA	34032436	33958994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_33959544_33960637_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
Isoform_44269_3	chr14	-	3669	11	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-51	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	27.4082104486958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATTCTGTGAAGCTT	NA	False	NA	-21	True	AATATA	-26	NA	34032501	33958996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_33959544_33960637_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
Isoform_44275_627	chr14	-	360	3	FSM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	43	5	43	-5	multi-exon	FALSE	canonical	3	2248	junction_2	168.5	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTCCTGAGTTTACCT	NA	False	NA	-11	True	AATAAA	-16	NA	34077347	34073842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_34074035_34075654_34075718_34077242
Isoform_44276_28	chr14	-	496	3	FSM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	-93	5	-93	-5	multi-exon	FALSE	canonical	3	2248	junction_2	168.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTCCTGAGTTTACCT	NA	False	NA	-11	True	AATAAA	-16	NA	34077483	34073842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_34074035_34075654_34075718_34077242
Isoform_44278_11	chr14	-	446	3	NNC	ENSMUSG00000043681.6	novel	408	3	NA	NA	-6928	-5	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	1267.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTCCTGAGTTTACCT	NA	False	NA	-11	True	AATAAA	-16	NA	34084318	34073842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_34074035_34075654_34075718_34084127
Isoform_4428_35	chr10	-	1738	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	-41	993	10	0	multi-exon	FALSE	canonical	3	22	junction_7	97.8627156332334	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	False	NA	-7	True	AATAAA	-10	NA	116786326	116742681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
Isoform_44281_12	chr14	-	778	5	FSM	ENSMUSG00000023064.5	ENSMUST00000023826.5	852	5	74	0	74	0	multi-exon	FALSE	canonical	3	10	junction_4	6.72681202353685	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCTTCTTCTTTGTGC	6028	False	NA	NA	False	AATAAA	-19	NA	34096672	34092230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_34092523_34092813_34092874_34095212_34095341_34095627_34095670_34096416
Isoform_44289_18	chr14	-	5606	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	18	332	18	-332	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224626	34133022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
Isoform_44290_21	chr14	-	5541	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	83	332	-76	-332	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224561	34133022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
Isoform_44291_29	chr14	-	5486	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	138	332	-21	-332	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224506	34133022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
Isoform_44293_5	chr14	-	5883	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	79	-6	79	6	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACATTGGAAAGTTTC	NA	False	NA	-5	True	AATAAA	-28	NA	34224565	34132684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
Isoform_44295_6	chr14	-	5710	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-20	-327	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	41.8421943828145	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGTTTTGTGATGCT	NA	False	NA	0	True	AGTAAA	-24	NA	34224505	34133017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34223318_34223539_34224351
Isoform_44296_3	chr14	-	5828	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	18	-330	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	41.8421943828145	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATGTGTTTTGTGAT	NA	False	NA	-3	True	AGTAAA	-21	NA	34224626	34133020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34223318_34223539_34224351
Isoform_44298_15	chr14	-	5548	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-75	-327	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_12	27.8581476212775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGTTTTGTGATGCT	NA	False	NA	0	True	AGTAAA	-24	NA	34224560	34133017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34224351
Isoform_44299_22	chr14	-	5495	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-22	-327	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_12	27.8581476212775	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGTTTTGTGATGCT	NA	False	NA	0	True	AGTAAA	-24	NA	34224507	34133017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34224351
Isoform_44303_8	chr14	-	5626	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	6	-327	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_12	27.8581476212775	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGTTTTGTGATGCT	NA	False	NA	0	True	AGTAAA	-24	NA	34224638	34133017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34224351
Isoform_44304_6	chr14	-	5707	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-19	-332	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	42.7092828344926	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224504	34133022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34223318_34223539_34224351
Isoform_44305_4	chr14	-	3711	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	33	1317	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	42.7092828344926	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGATCTGGTTCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	34224611	34135125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34223318_34223539_34224351
Isoform_44306_3	chr14	-	5776	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	71	-332	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	42.7092828344926	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224573	34133022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34223318_34223539_34224351
Isoform_44307_3	chr14	-	3992	7	ISM	ENSMUSG00000021798.15	ENSMUST00000090040.12	4981	15	33172	-12	21506	12	3prime_fragment	FALSE	canonical	2	3	junction_5	1.46249406456535	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATACAAATGGCGATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	34277445	34248669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_34251507_34258521_34258638_34263824_34263946_34264383_34264565_34265929_34266375_34274133_34274280_34277299
Isoform_44310_18	chr14	-	7478	11	FSM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	25	6	25	-6	multi-exon	FALSE	canonical	3	13	junction_1	23.4444023169711	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGCTTGTCTCCACA	NA	False	NA	NA	False	AATAAA	-21	NA	36690709	36596898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
Isoform_44312_10	chr14	-	7419	10	FSM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	-93	8	-3	-8	multi-exon	FALSE	canonical	3	47	junction_1	10.4432623444526	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTGTGCTTGTCTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	36690737	36596900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
Isoform_44313_44	chr14	-	7399	10	FSM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	-65	0	25	0	multi-exon	FALSE	canonical	3	47	junction_1	10.4432623444526	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	36690709	36596892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
Isoform_44314_5	chr14	-	3550	10	FSM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	-121	3905	-31	0	multi-exon	FALSE	canonical	3	47	junction_1	10.4432623444526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTTTGGTTCTTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	36690765	36600797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
Isoform_44353_4200	chr14	-	2506	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-43	725	-23	7	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	4200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857252	36842773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
Isoform_44354_219	chr14	-	2876	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-43	355	-23	-355	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTAAAAGACCTATTGT	NA	False	NA	33	True	CATAAA	-19	NA	36857252	36842403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
Isoform_44355_479	chr14	-	2834	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-43	397	-23	335	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTCTTTAGTCTCCA	NA	False	NA	-9	True	AGTAAA	-19	NA	36857252	36842445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
Isoform_44380_3	chr14	-	5763	8	FSM	ENSMUSG00000037833.15	ENSMUST00000096000.4	1597	8	172	-4338	172	2259	multi-exon	FALSE	canonical	3	14	junction_2	5.69998209807429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATAAAGGAATGGCCTC	NA	False	NA	NA	False	AATAAA	-12	NA	40615051	40533486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738
Isoform_44381_3	chr14	-	5886	9	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-705	2264	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	6.40190401365094	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGAATGGCCTCCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	40615928	40533481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738_40614927_40615685
Isoform_44394_1042	chr14	-	2429	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-29	75	-29	-73	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTTGTTTGGGTCTTT	NA	False	NA	-26	True	AATATA	-12	NA	40688793	40628476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
Isoform_44395_964	chr14	-	2538	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-66	3	-66	-1	multi-exon	TRUE	canonical	3	610	junction_1	26.6868413267663	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTGGTGATAAATTG	NA	False	NA	46	True	ATTAAA	-15	NA	40688830	40628404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
Isoform_44397_242	chr14	-	2626	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-154	3	-154	-1	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTGGTGATAAATTG	NA	False	NA	46	True	ATTAAA	-15	NA	40688918	40628404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
Isoform_44398_283	chr14	-	2552	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-152	75	-152	-73	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTTGTTTGGGTCTTT	NA	False	NA	-26	True	AATATA	-12	NA	40688916	40628476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
Isoform_44404_28	chr14	-	2331	8	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-29	-73	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	223.728607459838	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTTGTTTGGGTCTTT	NA	False	NA	-26	True	AATATA	-12	NA	40688793	40628476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40688732
Isoform_44413_19	chr14	-	1620	6	NIC	ENSMUSG00000021792.16	novel	1537	6	NA	NA	-6	5	combination_of_known_junctions	TRUE	canonical	3	24	junction_5	120.659852477947	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGTGCACAAGTTT	NA	False	NA	-17	True	AATAAA	-16	NA	40735738	40715691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735582
Isoform_44414_136	chr14	-	1546	6	FSM	ENSMUSG00000021792.16	ENSMUST00000022317.15	1537	6	-5	-4	-5	4	multi-exon	FALSE	canonical	3	150	junction_5	72.4911029023562	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTCTGTGCACAAGTT	NA	False	NA	-18	True	AATAAA	-15	NA	40735737	40715692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
Isoform_44415_14	chr14	-	1657	6	NIC	ENSMUSG00000021792.16	novel	1567	6	NA	NA	-14	4	combination_of_known_junctions	TRUE	canonical	3	17	junction_5	123.38816799029	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTCTGTGCACAAGTT	NA	False	NA	-18	True	AATAAA	-15	NA	40735759	40715692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735582
Isoform_44417_127	chr14	-	1575	6	FSM	ENSMUSG00000021792.16	ENSMUST00000118466.8	1567	6	-5	-3	-5	3	multi-exon	FALSE	canonical	3	166	junction_5	66.6111101844129	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40735750	40715693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735654
Isoform_44419_4	chr14	-	3480	21	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	7	junction_20	9.22212014669078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45456892	45372363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456803
Isoform_44420_12	chr14	-	3874	22	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	0	-1	intron_retention	FALSE	canonical	2	4	junction_20	9.63859400177566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATATTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-40	NA	45456882	45372364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456673
Isoform_44421_25	chr14	-	3599	21	FSM	ENSMUSG00000021830.15	ENSMUST00000139526.9	5045	21	3	1443	3	-1	multi-exon	FALSE	canonical	3	25	junction_19	5.21152568831815	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATATTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-40	NA	45456879	45372364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
Isoform_44435_79	chr14	-	4317	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	5	96	5	-96	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTGACTGCAGGTAC	NA	False	NA	-7	True	NA	NA	NA	45556024	45520639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_44441_265	chr14	-	4379	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	35	4	35	-4	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCTTTGGTCTTTGGTC	NA	False	NA	85	True	AATAAA	-16	NA	45555994	45520547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_44442_36	chr14	-	4408	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	5	5	5	-5	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCTTTGGTCTTTGGT	NA	False	NA	84	True	AATAAA	-15	NA	45556024	45520548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_44453_89	chr14	-	4275	15	NIC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	-96	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	176.639737711466	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTGACTGCAGGTAC	NA	False	NA	-7	True	NA	NA	NA	45555994	45520639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_44455_28	chr14	-	4367	15	NIC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	176.639737711466	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCTTTGGTCTTTGGTC	NA	False	NA	85	True	AATAAA	-16	NA	45555994	45520547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_44461_87	chr14	-	2651	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	138	-1	-30	1	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATCCATCAGGTAACT	NA	False	NA	NA	False	ATTAAA	-12	NA	45626280	45613789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_44466_18	chr14	-	2742	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	46	0	46	0	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCCATCAGGTAAC	NA	False	NA	NA	False	ATTAAA	-11	NA	45626372	45613790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_44468_372	chr14	-	1531	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	139	1118	-29	702	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTTGTCTTGTGTTTT	NA	False	NA	-2	True	ATTAAA	-29	NA	45626279	45614908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_44472_66	chr14	-	1649	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	21	1118	21	702	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTTGTCTTGTGTTTT	NA	False	NA	-2	True	ATTAAA	-29	NA	45626397	45614908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_44487_63	chr14	-	3344	14	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	290	1	-42	-1	3prime_fragment	FALSE	canonical	3	310	junction_11	30.5207272668822	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCTTTTGTACTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	45767285	45696252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881
Isoform_44494_645	chr14	-	3236	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	56	1	56	-1	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCTTTTGTACTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	45767519	45696252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
Isoform_44498_27	chr14	-	3441	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	-149	1	-149	-1	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCTTTTGTACTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	45767724	45696252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
Isoform_44504_24	chr14	-	3635	14	FSM	ENSMUSG00000037697.20	ENSMUST00000087320.13	9820	14	-69	6254	12	-2	multi-exon	FALSE	canonical	3	27	junction_12	30.2633412313513	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45895587	45832180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
Isoform_44505_6	chr14	-	5204	14	FSM	ENSMUSG00000037697.20	ENSMUST00000087320.13	9820	14	-88	4704	-6	0	multi-exon	FALSE	canonical	3	27	junction_12	30.2633412313513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGAGTCTCTTGAG	NA	False	NA	-3	True	ATTAAA	-20	NA	45895606	45830630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
Isoform_44509_81	chr14	-	3547	13	FSM	ENSMUSG00000037697.20	ENSMUST00000111828.4	9802	13	-2	6257	-1	-2	multi-exon	FALSE	canonical	3	71	junction_11	14.0049594390305	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45895601	45832180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
Isoform_44511_22	chr14	-	5119	13	FSM	ENSMUSG00000037697.20	ENSMUST00000111828.4	9802	13	-22	4705	-21	2	multi-exon	TRUE	canonical	3	71	junction_11	14.0049594390305	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGAGTCTCTTGAGTC	NA	False	NA	-1	True	ATTAAA	-22	NA	45895621	45830628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
Isoform_44512_3	chr14	-	3360	12	NIC	ENSMUSG00000037697.20	novel	9802	13	NA	NA	11	-2	intron_retention	FALSE	canonical	2	3	junction_11	32.6810279332958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45895588	45832180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45894678
Isoform_44513_4	chr14	-	3456	12	FSM	ENSMUSG00000037697.20	ENSMUST00000051310.13	5012	12	6	1550	5	-2	multi-exon	FALSE	canonical	3	14	junction_1	31.1368613098913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45895594	45832180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
Isoform_44517_11	chr14	-	3280	2	ISM	ENSMUSG00000037697.20	ENSMUST00000051310.13	5012	12	-27	34249	-27	984	5prime_fragment	FALSE	canonical	3	117	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	45895627	45864879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_45867211_45894678
Isoform_44518_6	chr14	-	1780	3	ISM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	3307	0	-58	0	3prime_fragment	FALSE	canonical	3	35	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGACCTTTCTATCTTAT	9672	False	NA	NA	False	AATAAA	-25	NA	46624819	46620976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_46622170_46623171_46623552_46624612
Isoform_44519_10	chr14	-	1676	3	ISM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	3403	8	38	-8	3prime_fragment	FALSE	canonical	3	35	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAAACTAAGACCTTTC	9768	False	NA	NA	False	AATAAA	-17	NA	46624723	46620984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_46622170_46623171_46623552_46624612
Isoform_44522_3	chr14	-	1834	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	29	201	29	-14	multi-exon	FALSE	canonical	3	24	junction_3	6.0184900284226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	6394	False	NA	NA	False	NA	NA	NA	46628097	46621177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
Isoform_44523_5	chr14	-	1800	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	61	203	-58	-16	multi-exon	FALSE	canonical	3	24	junction_3	6.0184900284226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6426	False	NA	NA	False	NA	NA	NA	46628065	46621179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
Isoform_44525_4	chr14	-	1897	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	144	23	10	-23	multi-exon	FALSE	canonical	3	24	junction_3	6.0184900284226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCATTATTTTAAAGAT	6509	False	NA	NA	False	AATAAA	-2	NA	46627982	46620999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
Isoform_44526_469	chr14	-	1326	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	103	109	26	-109	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGATGCTTTGCTGTG	NA	False	NA	NA	False	AATAAA	-8	NA	47025765	47013132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
Isoform_44528_121	chr14	-	1364	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	65	109	-12	-109	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGATGCTTTGCTGTG	NA	False	NA	NA	False	AATAAA	-8	NA	47025803	47013132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
Isoform_44529_37	chr14	-	1429	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	103	6	26	-6	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATTATTACATTGTCT	NA	False	NA	NA	False	AATAAA	-25	NA	47025765	47013029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
Isoform_44530_13	chr14	-	1506	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	21	11	21	-11	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAGTAAATTATTACAT	NA	False	NA	NA	False	AATAAA	-20	NA	47025847	47013034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
Isoform_44537_11	chr14	-	4294	8	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-27	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	265.835072393177	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTTCTAGTGTTTTA	NA	False	NA	-8	True	AATAAA	-12	NA	47059668	47045611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47055872_47056033_47059557
Isoform_44538_729	chr14	-	4116	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	50	5	-8	-5	multi-exon	FALSE	canonical	0	0	junction_3	212.21091447478	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTTCTAGTGTTTTAT	NA	False	NA	-7	True	AATAAA	-13	NA	47059649	47045610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
Isoform_4454_374	chr10	-	2036	16	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	33	3	combination_of_known_junctions	FALSE	canonical	3	239	junction_15	561.749291647677	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTACTGATCTGTATA	NA	False	NA	-8	True	AATAAA	-22	NA	116899247	116886902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899064
Isoform_44543_10	chr14	-	4097	6	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	287.74321886015	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059675	47045605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47054842_47054940_47059557
Isoform_44545_38	chr14	-	3862	3	FSM	ENSMUSG00000062014.14	ENSMUST00000228065.2	280	3	-62	-3520	24	-5	multi-exon	FALSE	canonical	2	4	junction_2	282	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTTCTAGTGTTTTAT	NA	False	NA	-7	True	AATAAA	-13	NA	47059675	47045610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47049281_47051700_47051775_47059557
Isoform_44546_31	chr14	-	2774	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	0	1	0	-1	multi-exon	FALSE	canonical	3	47	junction_1	5.3665631459995	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGTGGATGTTGTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	47426870	47391352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
Isoform_4455_4384	chr10	-	1926	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	36	-3	-15	3	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	4384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTACTGATCTGTATA	NA	False	NA	-8	True	AATAAA	-22	NA	116899683	116886902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
Isoform_44555_19	chr14	-	4172	25	FSM	ENSMUSG00000037572.18	ENSMUST00000111792.9	4174	25	2	0	2	0	multi-exon	FALSE	canonical	1	22	junction_16	87.7556582537876	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514312	47478400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504520_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
Isoform_44558_555	chr14	-	4238	25	FSM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	22	0	-3	0	multi-exon	FALSE	canonical	1	98	junction_11	68.6814304516795	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514267	47478400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
Isoform_44559_145	chr14	-	4283	25	FSM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	-23	0	2	0	multi-exon	FALSE	canonical	1	98	junction_11	68.6814304516795	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514312	47478400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
Isoform_4456_90	chr10	-	1969	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	-10	0	-10	0	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899729	116886905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
Isoform_44565_42	chr14	-	2760	19	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	120.677715884546	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACATTCTTTTCTTCG	NA	False	NA	NA	False	NA	NA	NA	47655672	47625243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_47625577_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
Isoform_44580_23	chr14	-	2772	19	FSM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	192	0	-8	0	multi-exon	FALSE	canonical	3	355	junction_12	54.7968470301389	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTCTTCGCATTGTTA	NA	False	NA	NA	False	NA	NA	NA	47655672	47625235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
Isoform_44582_21	chr14	-	2988	17	FSM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	-38	1117	-8	3	multi-exon	FALSE	canonical	3	355	junction_10	53.3282508971558	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCATTTAATGTCTTTTG	NA	False	NA	NA	False	AATGAA	-16	NA	47655672	47627291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
Isoform_44588_293	chr14	-	3429	10	FSM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	22	-1	-8	0	multi-exon	FALSE	canonical	3	110	junction_3	17.6572301841987	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47805869	47778349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
Isoform_44593_33	chr14	-	3781	12	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6148	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	46.0637359383175	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47814254	47778349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47813988_47814069_47814201
Isoform_44594_11	chr14	-	3356	11	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6169	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_9	47.2847755625423	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47814275	47778349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47813988_47814069_47814201
Isoform_44595_24	chr14	-	2106	3	FSM	ENSMUSG00000021848.17	ENSMUST00000122009.8	1737	3	124	-493	124	-1	multi-exon	FALSE	canonical	3	33	junction_2	5.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGTCTAGTTTAATT	NA	False	NA	-2	True	ATTAAA	-15	NA	48900205	48895134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_48896784_48898755_48898908_48899900
Isoform_44597_4	chr14	-	2178	4	FSM	ENSMUSG00000021848.17	ENSMUST00000118578.9	2144	4	-33	-1	-33	-1	multi-exon	FALSE	canonical	2	4	junction_3	16.8720676464584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGTCTAGTTTAATT	NA	False	NA	-2	True	ATTAAA	-15	NA	48902596	48895134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_48896784_48898755_48898908_48899900_48900117_48902435
Isoform_44598_15	chr14	-	2053	4	NNC	ENSMUSG00000021848.17	novel	2144	4	NA	NA	-86	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	13.7194104181711	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGTCTAGTTTAATT	NA	False	NA	-2	True	ATTAAA	-15	NA	48900415	48895134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_48896784_48898755_48898908_48899900_48900117_48900379
Isoform_44600_4	chr14	-	2132	3	ISM	ENSMUSG00000021848.17	ENSMUST00000119070.8	1708	5	4763	-493	122	-1	3prime_fragment	FALSE	canonical	3	9	junction_2	17.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGTCTAGTTTAATT	NA	False	NA	-2	True	ATTAAA	-15	NA	48900207	48895134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_48896784_48898755_48898932_48899900
Isoform_44604_103	chr14	-	4374	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	271	8054	14	1611	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTTTTTTATTTTTT	NA	False	NA	-5	True	AATAAA	-13	NA	49303839	49249600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
Isoform_44606_24	chr14	-	4596	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	271	7832	14	1833	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTATTTATTCTTTGCAT	NA	False	NA	3	True	AATAAA	-19	NA	49303839	49249378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
Isoform_44607_3	chr14	-	2748	8	FSM	ENSMUSG00000036242.16	ENSMUST00000118129.2	3100	8	0	352	0	-352	multi-exon	FALSE	canonical	2	2	junction_1	11.3730795642829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCCTTTTCTTGGTTTGG	NA	False	NA	-1	True	AATAAA	-18	NA	50020828	49919476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_49919871_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_44608_12	chr14	-	3111	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	7	5713	-5	3	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGCTTGCTTTCTTAA	NA	False	NA	NA	False	CATAAA	-13	NA	50020833	49919121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_44610_37	chr14	-	2752	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	12	6067	0	-351	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTTTCTTGGTTTGGA	NA	False	NA	0	True	AATAAA	-19	NA	50020828	49919475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_44612_18	chr14	-	3022	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	14	5795	2	-79	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTCTCTTTCATAGT	NA	False	NA	NA	False	ATTAAA	-23	NA	50020826	49919203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_44614_4	chr14	-	3578	5	ISM	ENSMUSG00000036242.16	ENSMUST00000118129.2	3100	8	-5	68365	-5	-21144	5prime_fragment	FALSE	canonical	3	28	junction_3	3.57071421427143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTGATTTGTGAACAC	NA	False	NA	NA	False	AATAAA	-13	NA	50020833	49987489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_44620_1693	chr14	-	1828	10	FSM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	4	10	4	-10	multi-exon	FALSE	canonical	3	788	junction_6	38.5313724991294	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTTACCCTATAGTT	NA	False	NA	-16	True	ATTAAA	-11	NA	51022972	51002881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
Isoform_44624_27	chr14	-	1733	9	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	273.975820100972	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCCTATAGTTCTGTCT	NA	False	NA	-10	True	ATTAAA	-17	NA	51022963	51002875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51014718_51014870_51015213_51015426_51018931_51019065_51022894
Isoform_44629_21	chr14	-	2797	4	FSM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	-13	-418	-9	418	multi-exon	FALSE	canonical	3	834	junction_3	1.69967317119759	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACCCCAAAACC	NA	False	NA	NA	False	NA	NA	NA	51022965	51012488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51014870_51015213_51015426_51018931_51019065_51022894
Isoform_44630_23	chr14	-	2384	4	FSM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	-20	2	4	-2	multi-exon	FALSE	canonical	3	834	junction_3	1.69967317119759	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCCGAGAGCTGCTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	51022972	51012908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51014870_51015213_51015426_51018931_51019065_51022894
Isoform_44634_202	chr14	-	1471	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	36	2	36	-2	multi-exon	FALSE	canonical	3	174	junction_1	17.4419672692682	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	8912	False	NA	-1	True	AATAAA	-18	NA	51033149	51026706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
Isoform_44635_9	chr14	-	1540	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	90.8745701502901	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	8912	False	NA	-1	True	AATAAA	-18	NA	51033149	51026706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_51027470_51029429_51029764_51031014_51031332_51032164_51032234_51033092
Isoform_44636_41	chr14	-	1547	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	80.7971998277168	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	8906	False	NA	-1	True	AATAAA	-18	NA	51033155	51026706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_51027470_51027592_51027663_51029429_51029764_51031014_51031332_51033092
Isoform_44637_3	chr14	-	1565	9	ISM	ENSMUSG00000006281.9	ENSMUST00000006444.9	8171	55	40494	3	5	-3	intron_retention	FALSE	canonical	3	29	junction_7	7.91260860904923	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTATGCCCGATTGTG	NA	False	NA	-7	True	TATAAA	-21	NA	51067523	51061518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119
Isoform_44638_9	chr14	-	1486	10	ISM	ENSMUSG00000006281.9	ENSMUST00000006444.9	8171	55	40494	3	5	-3	3prime_fragment	FALSE	canonical	3	29	junction_7	7.57187779440036	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTATGCCCGATTGTG	NA	False	NA	-7	True	TATAAA	-21	NA	51067523	51061518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328
Isoform_44639_8	chr14	-	6702	46	ISM	ENSMUSG00000006281.9	ENSMUST00000006444.9	8171	55	14588	3	-1820	-3	3prime_fragment	FALSE	canonical	2	6	junction_37	10.4075945679757	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTATGCCCGATTGTG	97	False	NA	-7	True	TATAAA	-21	NA	51093429	51061518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084053_51084289_51084467_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046
Isoform_44642_852	chr14	-	1261	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	38	2089	-12	-1	multi-exon	TRUE	canonical	3	62	junction_9	170.895289578151	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGGTTGTGTTTTTCAGT	NA	False	NA	-2	True	AATAAA	-23	NA	51162312	51153139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
Isoform_44647_12	chr14	-	1182	10	NIC	ENSMUSG00000006289.15	novel	3388	11	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	2	23	junction_5	240.470577754186	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGGTTGTGTTTTTCAGT	NA	False	NA	-2	True	AATAAA	-23	NA	51162312	51153139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
Isoform_44656_23	chr14	-	2393	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	6	356	-5	-356	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGGTCTAAGAAAAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	51168300	51163880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
Isoform_44657_723	chr14	-	1598	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	7	1150	-4	-1	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168299	51164674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
Isoform_44659_75	chr14	-	1644	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	-37	1148	-30	1	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168343	51164672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
Isoform_44662_239	chr14	-	1580	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	13	1	-5	1	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168300	51164672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
Isoform_44663_54	chr14	-	1623	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	-30	1	-30	1	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168343	51164672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
Isoform_44667_55	chr14	-	1499	6	FSM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	-37	3	0	-1	multi-exon	FALSE	canonical	3	65	junction_3	295.870647412007	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168306	51164674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
Isoform_44669_21	chr14	-	1473	6	FSM	ENSMUSG00000035953.15	ENSMUST00000161166.8	1445	6	-29	1	-4	1	multi-exon	FALSE	canonical	3	65	junction_3	330.807859640608	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168299	51164672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168090
Isoform_44670_18	chr14	-	1743	6	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-4	1	intron_retention	FALSE	canonical	3	698	junction_5	55.1049906995728	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168299	51164672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_51165495_51166277_51166369_51166462_51166765_51167040_51167148_51167590_51167782_51168069
Isoform_44688_41	chr14	-	2027	16	FSM	ENSMUSG00000004558.16	ENSMUST00000004673.15	2099	16	61	11	-11	1	multi-exon	FALSE	canonical	3	23	junction_14	42.8779145429854	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATTGTTAATCCGGGT	NA	False	NA	-10	True	AATAAA	-17	NA	52150826	52142738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52150779
Isoform_44691_114	chr14	-	1974	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	130	-1	0	1	multi-exon	FALSE	canonical	3	127	junction_6	11.1385064766607	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATTGTTAATCCGGGT	NA	False	NA	-10	True	AATAAA	-17	NA	52150815	52142738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
Isoform_44692_23	chr14	-	2108	15	NIC	ENSMUSG00000004558.16	novel	2103	15	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	33.5830526988156	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATTGTTAATCCGGGT	9377	False	NA	-10	True	AATAAA	-17	NA	52151550	52142738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52151380
Isoform_44693_9	chr14	-	2163	15	NIC	ENSMUSG00000004558.16	novel	2103	15	NA	NA	11	2	combination_of_known_junctions	TRUE	canonical	3	23	junction_14	33.5830526988156	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTGTTAATCCGGGTC	9323	False	NA	-9	True	AATAAA	-18	NA	52151604	52142737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52151380
Isoform_44714_30	chr14	-	2819	5	NIC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	155.633182515812	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	9468	False	NA	-8	True	AATAAA	-19	NA	52248336	52243539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52248238
Isoform_44716_257	chr14	-	2831	5	FSM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	-33	6	-33	-1	multi-exon	FALSE	canonical	3	80	junction_4	128.961961446002	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5732	False	NA	-8	True	AATAAA	-19	NA	52252072	52243539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251962
Isoform_44719_29	chr14	-	2994	6	FSM	ENSMUSG00000049295.18	ENSMUST00000166169.4	3017	6	25	-2	25	-2	multi-exon	FALSE	canonical	3	13	junction_5	162.277540035582	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5764	False	NA	-9	True	AATAAA	-18	NA	52257120	52243540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252510_52256951
Isoform_44724_28	chr14	-	3232	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	162.023948847076	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5743	False	NA	-8	True	AATAAA	-19	NA	52257141	52243539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52256951
Isoform_44725_19	chr14	-	3095	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-87	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	164.327234504814	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5627	False	NA	-8	True	AATAAA	-19	NA	52257257	52243539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52257204
Isoform_4473_64	chr10	-	5741	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	-8	687	-8	-687	multi-exon	FALSE	canonical	3	66	junction_1	21.0226215606891	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCCCCTCTGTCTTT	NA	False	NA	-1	True	AATAAA	-29	NA	116984423	116906018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
Isoform_44734_31	chr14	-	2912	5	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	155.633182515812	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5742	False	NA	-8	True	AATAAA	-19	NA	52257142	52243539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52256951
Isoform_44738_16	chr14	-	3019	5	NIC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	-50	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	158.033817583453	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5382	False	NA	-8	True	AATAAA	-19	NA	52257502	52243539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257204
Isoform_4474_29	chr10	-	6430	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	-8	-2	-8	2	multi-exon	FALSE	canonical	3	66	junction_1	21.0226215606891	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAAGTTTTACTGTATTT	NA	False	NA	-3	True	AATAAA	-30	NA	116984423	116905329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
Isoform_44740_342	chr14	-	2919	5	FSM	ENSMUSG00000049295.18	ENSMUST00000067549.15	2933	5	13	1	-1	-1	multi-exon	FALSE	canonical	3	82	junction_4	128.195895020082	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	4707	False	NA	-8	True	AATAAA	-19	NA	52258177	52243539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257979
Isoform_44742_16	chr14	-	2819	5	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	159.637675690922	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5732	False	NA	-9	True	AATAAA	-18	NA	52257152	52243540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257053
Isoform_44748_39	chr14	-	2834	4	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	179.668831155793	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5731	False	NA	-8	True	AATAAA	-19	NA	52257153	52243539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52256951
Isoform_44751_477	chr14	-	2829	4	FSM	ENSMUSG00000049295.18	ENSMUST00000228580.2	2812	4	-18	1	0	-1	multi-exon	FALSE	canonical	3	96	junction_3	140.753527684231	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	4708	False	NA	-8	True	AATAAA	-19	NA	52258176	52243539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52257979
Isoform_4476_3	chr10	-	5767	9	NIC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	0	-595	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	38.4285050450834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGAGTGTGGCTTTGTGG	NA	False	NA	-1	True	AATAAA	-19	NA	116984400	116905926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116938017_116938104_116984296
Isoform_44769_104	chr14	-	2588	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227458.2	1683	9	5	-910	1	2	multi-exon	FALSE	canonical	3	633	junction_2	1099.6436638748	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGAAGCTGGTGTGTAC	8755	False	NA	-36	True	AATAAA	-21	NA	52341455	52310999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_4477_3	chr10	-	2130	6	FSM	ENSMUSG00000020170.5	ENSMUST00000219483.2	2145	6	-5	20	-5	-20	multi-exon	FALSE	canonical	1	1	junction_1	43.0330105848987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTAGCCCTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	116984405	116918729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_116920505_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
Isoform_44771_277	chr14	-	1338	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227458.2	1683	9	-1	346	0	0	multi-exon	FALSE	canonical	3	633	junction_2	1099.6436638748	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8749	False	NA	42	True	AATAAA	-18	NA	52341461	52312255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_44777_73	chr14	-	2576	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1178.64943464794	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGGTGTGTACAAAAT	8746	False	NA	-31	True	AATAAA	-26	NA	52341464	52310994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_44779_192	chr14	-	1310	8	NIC	ENSMUSG00000060373.16	novel	1683	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1178.64943464794	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8754	False	NA	45	True	AATAAA	-21	NA	52341456	52312252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_4479_185	chr10	-	1313	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	19	-5	2	4	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTTGTGACTTC	3390	False	NA	-9	True	AATAAA	-19	NA	117060393	117051121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
Isoform_44791_124	chr14	-	1379	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	-5	1124	0	-1	multi-exon	FALSE	canonical	3	714	junction_5	1148.92795139643	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8749	False	NA	41	True	AATAAA	-17	NA	52341461	52312256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_44797_96	chr14	-	1349	8	NIC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1238.64623270566	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8754	False	NA	42	True	AATAAA	-18	NA	52341456	52312255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
Isoform_44811_509	chr14	-	1339	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	8	344	0	3	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8754	False	NA	45	True	AATAAA	-21	NA	52341456	52312252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_44812_188	chr14	-	2596	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	9	-914	1	7	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGGTGTGTACAAAAT	8755	False	NA	-31	True	AATAAA	-26	NA	52341455	52310994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_4482_163	chr10	-	1392	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	16	-81	-1	80	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTGCTTTGATCATA	3387	False	NA	-1	True	AATAAA	-22	NA	117060396	117051045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
Isoform_44821_156	chr14	-	2564	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTGTTAGAAGCTGG	8749	False	NA	-43	True	AATAAA	-14	NA	52341461	52311006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_44825_417	chr14	-	1310	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8754	False	NA	42	True	AATAAA	-18	NA	52341456	52312255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_44836_65	chr14	-	2644	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	30	173	1	-5	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTGTTAGAAGCTGG	8755	False	NA	-43	True	AATAAA	-14	NA	52341455	52311006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_44839_113	chr14	-	1403	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	23	1421	0	1	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGTCTCCAAAATAATC	8748	False	NA	43	True	AATAAA	-19	NA	52341462	52312254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_44843_105	chr14	-	1372	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1223.61628639314	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8755	False	NA	45	True	AATAAA	-21	NA	52341455	52312252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
Isoform_44860_271	chr14	-	2611	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	1	5	0	-5	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTGTTAGAAGCTGG	8749	False	NA	-43	True	AATAAA	-14	NA	52341461	52311006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_44865_567	chr14	-	1361	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	1	1255	0	-1	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8749	False	NA	41	True	AATAAA	-17	NA	52341461	52312256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_44870_126	chr14	-	2591	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-29	-1261	1	7	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGGTGTGTACAAAAT	8755	False	NA	-31	True	AATAAA	-26	NA	52341455	52310994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_44874_319	chr14	-	1331	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-30	0	0	0	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8754	False	NA	42	True	AATAAA	-18	NA	52341456	52312255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_44930_1313	chr14	-	4490	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	178	5	178	-5	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434695	52397875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
Isoform_44933_45	chr14	-	4714	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	-46	5	-46	-5	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434919	52397875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
Isoform_44936_155	chr14	-	4664	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	4	5	4	-5	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434869	52397875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
Isoform_44961_18	chr14	-	2033	6	NIC	ENSMUSG00000053754.15	novel	8509	38	NA	NA	12	-3262	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	13.0230564768798	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATACAGAGGACCT	9254	False	NA	NA	False	NA	NA	NA	52481954	52465107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52481889
Isoform_44962_16	chr14	-	2096	6	ISM	ENSMUSG00000053754.15	ENSMUST00000200169.6	8509	38	-25	29500	-25	-3262	5prime_fragment	FALSE	canonical	3	27	junction_5	9.99199679743744	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATACAGAGGACCT	406	False	NA	NA	False	NA	NA	NA	52495262	52465107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52495134
Isoform_44964_10	chr14	-	2475	4	ISM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	10663	6	224	1	3prime_fragment	FALSE	canonical	3	133	junction_2	4.18993502999218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTCATGTGTCATT	NA	False	NA	-5	True	ATTAAA	-21	NA	52506339	52499221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098
Isoform_44965_3	chr14	-	2549	7	ISM	ENSMUSG00000022159.17	ENSMUST00000174020.8	607	8	211	-1943	211	-1	3prime_fragment	FALSE	canonical	2	5	junction_5	51.6196022198286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTATTTCATGTGTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	52516487	52499223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506414_52512899_52512968_52516370
Isoform_44966_4	chr14	-	2642	7	ISM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	462	12	158	0	3prime_fragment	FALSE	canonical	3	132	junction_5	7.58653778449403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACTTTTATTTCATGT	NA	False	NA	-11	True	ATTAAA	-15	NA	52516540	52499227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370
Isoform_44967_154	chr14	-	2658	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	242	6	-5	1	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTCATGTGTCATT	NA	False	NA	-5	True	ATTAAA	-21	NA	52516760	52499221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
Isoform_44968_66	chr14	-	2680	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	218	8	12	-1	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTATTTCATGTGTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	52516784	52499223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
Isoform_44971_4	chr14	-	2784	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	114	8	-92	-1	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTATTTCATGTGTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	52516888	52499223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
Isoform_44972_3	chr14	-	2688	7	NNC	ENSMUSG00000022159.17	novel	2906	8	NA	NA	212	-1	intron_retention	FALSE	canonical	1	1	junction_5	53.098702641611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTATTTCATGTGTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	52516486	52499223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506554_52512899_52512968_52516370
Isoform_44973_10	chr14	-	2045	11	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	18	junction_10	47.2699693251434	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGGCTTTCCACTTA	NA	False	NA	-19	True	AATAAA	-36	NA	52542603	52532300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542339
Isoform_44974_248	chr14	-	1999	11	FSM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	11	15	7	1	multi-exon	FALSE	canonical	3	126	junction_7	19.5910693939866	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTGAAGTGAAATTATG	NA	False	NA	-31	True	AATAAA	-24	NA	52542574	52532312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
Isoform_44975_13	chr14	-	1795	10	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	11	junction_7	51.3181795814656	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAAGTGAAATTAT	NA	False	NA	-32	True	AATAAA	-23	NA	52542547	52532313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52537157_52537563_52537640_52537859_52542344
Isoform_44976_8	chr14	-	2330	10	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	11	664	7	2	5prime_fragment	FALSE	canonical	3	126	junction_6	20.5666636652858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCCATATTATTTGCTC	NA	False	NA	NA	False	ATTAAA	-23	NA	52542574	52532961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
Isoform_44977_3	chr14	-	2978	10	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	126	junction_6	20.5666636652858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAAGTGAAATTAT	NA	False	NA	-32	True	AATAAA	-23	NA	52542574	52532313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
Isoform_44978_3	chr14	-	2160	9	FSM	ENSMUSG00000022160.19	ENSMUST00000147768.8	2159	9	1	-2	1	2	multi-exon	FALSE	canonical	3	11	junction_6	54.0854358861977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCCATATTATTTGCTC	NA	False	NA	NA	False	ATTAAA	-23	NA	52542580	52532961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52537157_52537563_52537640_52537859_52542344
Isoform_44979_8	chr14	-	4676	2	FSM	ENSMUSG00000049532.12	ENSMUST00000135523.5	4773	2	87	10	87	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTGTGTGTTTCTCC	NA	False	NA	NA	False	ATTAAA	-14	NA	52553693	52548638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_52553121_52553499
Isoform_44980_699	chr14	-	643	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	228	7	38	-7	multi-exon	FALSE	canonical	3	1530	junction_1	8	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATTCGTTCCTTCAT	NA	False	NA	-18	True	ATTAAA	-17	NA	54491333	54472942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54473171_54480155_54480326_54491088
Isoform_44981_259	chr14	-	680	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	191	7	1	-7	multi-exon	FALSE	canonical	3	1530	junction_1	8	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATTCGTTCCTTCAT	NA	False	NA	-18	True	ATTAAA	-17	NA	54491370	54472942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54473171_54480155_54480326_54491088
Isoform_44987_7	chr14	-	3352	12	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-45	0	intron_retention	FALSE	canonical	3	13	junction_10	52.3909335415525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655282	54606900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045
Isoform_44990_3	chr14	-	2467	13	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	59.075516643248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	-4	True	AATAAA	-17	NA	54655281	54606898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654228_54655113
Isoform_44991_6	chr14	-	2361	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-183	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	53.460785212673	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655420	54606899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654228_54655357
Isoform_44992_25	chr14	-	2320	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-142	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	53.460785212673	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655379	54606899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654228_54655357
Isoform_44994_6	chr14	-	2522	12	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	58.1421739935326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655303	54606900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54654944
Isoform_44995_3	chr14	-	2333	12	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-45	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	59.5727210299235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655282	54606899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54655113
Isoform_44996_38	chr14	-	2208	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-164	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_10	53.1871792169678	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655401	54606899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54655357
Isoform_44997_32	chr14	-	2258	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-142	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_9	49.5403667112416	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655379	54606899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54655357
Isoform_45_32	ERCC-00019	+	625	1	FSM	ERCC-00019A	DQ883651	627	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00019_+_0_600
Isoform_45000_13	chr14	-	2447	11	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-52	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	51.7787601242054	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655289	54606899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54654944
Isoform_45003_8	chr14	-	2270	11	FSM	ENSMUSG00000000958.11	ENSMUST00000226753.2	2126	11	-146	2	-45	0	multi-exon	FALSE	canonical	3	16	junction_10	53.6977653166312	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655282	54606900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655113
Isoform_45004_41	chr14	-	2135	11	NNC	ENSMUSG00000000958.11	novel	2126	11	NA	NA	-153	-1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_9	44.7447203589429	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655390	54606899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655357
Isoform_45006_14	chr14	-	1943	10	NNC	ENSMUSG00000000958.11	novel	2132	10	NA	NA	-143	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	51.9767279358135	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655380	54606899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54655357
Isoform_45007_3	chr14	-	1598	10	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-163	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	55.7257393373238	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655400	54606900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54654045_54654228_54655357
Isoform_45024_1644	chr14	-	2525	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	156	10	-8	-10	multi-exon	FALSE	canonical	3	685	junction_14	59.4941895797396	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4851	False	NA	-21	True	AATAAA	-15	NA	54754826	54744653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
Isoform_4503_123	chr10	-	2107	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	58	4361	16	5	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTTCACGTTATTT	4532	False	NA	-4	True	AATAAA	-21	NA	117212817	117184938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_45031_28	chr14	-	2405	16	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-4	-7	combination_of_known_junctions	FALSE	canonical	3	95	junction_15	172.951425422156	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTACCCTGCTTCTT	4855	False	NA	-18	True	AATAAA	-18	NA	54754822	54744650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54754703
Isoform_45038_385	chr14	-	1558	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	29	0	29	0	multi-exon	FALSE	canonical	3	401	junction_5	37.1423687391577	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	False	NA	-1	True	AATAAA	-20	NA	54791789	54779241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
Isoform_4504_84	chr10	-	2984	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	2	3540	2	826	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACCTGGCTAGCATGT	4476	False	NA	NA	False	AATAAA	-12	NA	117212873	117184117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_45042_9	chr14	-	1682	9	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	29	-1	intron_retention	FALSE	canonical	3	401	junction_4	39.3904731502428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTAGTCATTTTTCC	NA	False	NA	-2	True	AATAAA	-19	NA	54791789	54779242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
Isoform_45044_874	chr14	-	3374	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	24	-1	24	1	multi-exon	TRUE	canonical	3	297	junction_5	54.835933399886	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGTGTATTGTGGTT	NA	False	NA	-5	True	AGTAAA	-19	NA	54814991	54804927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
Isoform_45046_14	chr14	-	3451	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	-53	-1	-53	1	multi-exon	FALSE	canonical	3	297	junction_5	54.835933399886	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGTGTATTGTGGTT	NA	False	NA	-5	True	AGTAAA	-19	NA	54815068	54804927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
Isoform_4505_122	chr10	-	3869	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	43	2614	1	1752	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCAGTGTCTCCTACC	4517	False	NA	-1	True	AATAAA	-19	NA	117212832	117183191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_45060_53	chr14	-	2596	7	FSM	ENSMUSG00000022179.6	ENSMUST00000022786.6	2670	7	74	0	74	0	multi-exon	FALSE	canonical	3	19	junction_6	4.10960933531265	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGTTGGGCTTAGT	NA	False	NA	-1	True	NA	NA	NA	54843376	54821119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828897_54832570_54833409_54843259
Isoform_45063_3492	chr14	-	881	3	FSM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	18	0	4	0	multi-exon	FALSE	canonical	3	1854	junction_2	4.5	3492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGTCCACAGTTATT	8642	False	NA	-17	True	AATAAA	-18	NA	54855461	54851575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54851939_54853971_54854279_54855250
Isoform_45085_15	chr14	-	2461	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	46	junction_12	150.58939759049	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3759	False	NA	-1	True	AATAAA	-24	NA	54891137	54879618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
Isoform_45086_10	chr14	-	2500	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	25	junction_12	154.077429127912	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3759	False	NA	-1	True	AATAAA	-24	NA	54891137	54879618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890775_54890991
Isoform_45087_27	chr14	-	2394	12	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	94	junction_11	134.131858154209	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	3759	False	NA	-3	True	AATAAA	-22	NA	54891137	54879620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890991
Isoform_45088_22	chr14	-	2265	12	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	2	44	junction_11	143.681063240374	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	3743	False	NA	-3	True	AATAAA	-22	NA	54891153	54879620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54891136
Isoform_45090_11	chr14	-	4710	19	FSM	ENSMUSG00000022185.20	ENSMUST00000147714.8	4383	19	-329	2	-14	-2	multi-exon	FALSE	canonical	3	51	junction_16	159.32330861072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	2616	False	NA	-3	True	AATAAA	-22	NA	54924402	54879620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
Isoform_45097_19	chr14	-	2492	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	46	junction_12	150.124947960024	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	3759	False	NA	-3	True	AATAAA	-22	NA	54891137	54879620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54890670_54890736_54890991
Isoform_45098_13	chr14	-	2533	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	25	junction_12	153.646306496447	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3759	False	NA	-1	True	AATAAA	-24	NA	54891137	54879618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54890670_54890775_54890991
Isoform_45099_25	chr14	-	2425	12	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	94	junction_11	133.183462602321	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATTTGAGTGCCTTTC	3758	False	NA	-6	True	AATAAA	-19	NA	54891138	54879623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54890991
Isoform_45100_32	chr14	-	2301	12	NIC	ENSMUSG00000022185.20	novel	2365	13	NA	NA	-1	0	intron_retention	FALSE	canonical	2	44	junction_11	142.865538124038	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3743	False	NA	0	True	AATAAA	-25	NA	54891153	54879617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54891136
Isoform_45101_13	chr14	-	4766	19	NIC	ENSMUSG00000022185.20	novel	4735	19	NA	NA	-40	0	intron_retention	FALSE	canonical	3	51	junction_16	159.626386707628	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATTTGAGTGCCTTTC	2590	False	NA	-6	True	AATAAA	-19	NA	54924428	54879623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
Isoform_45107_13	chr14	-	2755	12	FSM	ENSMUSG00000022185.20	ENSMUST00000167015.8	1746	12	-442	-567	0	0	multi-exon	FALSE	canonical	3	134	junction_11	95.7414735214897	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3758	False	NA	0	True	AATAAA	-25	NA	54891138	54879617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670
Isoform_45109_61	chr14	-	2498	13	FSM	ENSMUSG00000022185.20	ENSMUST00000150371.8	2494	13	2	-6	1	0	multi-exon	FALSE	canonical	3	46	junction_12	131.761437412047	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3759	False	NA	0	True	AATAAA	-25	NA	54891137	54879617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
Isoform_45111_34	chr14	-	2534	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	25	junction_12	135.990706381805	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	3759	False	NA	-3	True	AATAAA	-22	NA	54891137	54879620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890775_54890991
Isoform_45113_93	chr14	-	2433	12	FSM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	-64	0	1	0	multi-exon	FALSE	canonical	3	94	junction_11	105.5899600787	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3759	False	NA	0	True	AATAAA	-25	NA	54891137	54879617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890991
Isoform_45114_81	chr14	-	2302	12	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	44	junction_11	118.32012885626	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3744	False	NA	-1	True	AATAAA	-24	NA	54891152	54879618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54891136
Isoform_45119_43	chr14	-	4749	19	FSM	ENSMUSG00000022185.20	ENSMUST00000022793.15	4735	19	-14	0	-14	0	multi-exon	FALSE	canonical	3	51	junction_16	154.301732625911	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	2616	False	NA	0	True	AATAAA	-25	NA	54924402	54879617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
Isoform_4512_75	chr10	-	6526	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	2	-2	2	2	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTGCAGTTTGTTCT	4476	False	NA	-10	True	AATAAA	-15	NA	117212873	117180575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_45122_40	chr14	-	4299	18	FSM	ENSMUSG00000022185.20	ENSMUST00000111484.9	4048	18	313	-564	-2	-2	multi-exon	FALSE	canonical	3	59	junction_15	148.725217469731	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	2943	False	NA	-3	True	AATAAA	-22	NA	54924075	54879620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
Isoform_45124_37	chr14	-	4627	18	FSM	ENSMUSG00000022185.20	ENSMUST00000111484.9	4048	18	-13	-566	-13	0	multi-exon	FALSE	canonical	3	59	junction_15	148.725217469731	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	2617	False	NA	-1	True	AATAAA	-24	NA	54924401	54879618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
Isoform_45147_6	chr14	-	4098	11	FSM	ENSMUSG00000022180.8	ENSMUST00000022787.8	4084	11	-16	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_10	10.5375518978556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGATGGAGTTAATAATC	NA	False	NA	NA	False	AATAAA	-17	NA	55019403	54959667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54995895_54996048_54996997_54997203_55018636
Isoform_45148_9	chr14	-	3198	9	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	27026	-6	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	6.32331993497087	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAGTGATGGAGTTAAT	2188	False	NA	NA	False	AATAAA	-13	NA	54992361	54959671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54992133
Isoform_45149_20	chr14	-	3054	9	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	27170	-6	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	6.32331993497087	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAGTGATGGAGTTAAT	-4	True	NA	NA	False	AATAAA	-13	NA	54992217	54959671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54992133
Isoform_45151_7	chr14	-	1831	3	NIC	ENSMUSG00000057156.11	novel	4713	2	NA	NA	68	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCCACTTCTGTGTTT	5596	False	NA	-5	True	AATAAA	-34	NA	55101547	55093008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55093169_55094217_55095739_55101397
Isoform_45153_40	chr14	-	2904	2	FSM	ENSMUSG00000057156.11	ENSMUST00000142283.4	4713	2	44	1765	44	-1	multi-exon	FALSE	canonical	3	19	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCCACTTCTGTGTTT	5572	False	NA	-5	True	AATAAA	-34	NA	55101571	55093008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55095739_55101397
Isoform_45154_4	chr14	-	2191	9	NIC	ENSMUSG00000022199.13	novel	2340	10	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	2.93417364857638	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGGACTTCCCTCCCT	NA	False	NA	-10	True	AATAAA	-28	NA	55150561	55144196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55144817_55144975_55145088_55145342_55145561_55145717_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150191_55150323
Isoform_45155_8	chr14	-	2347	8	NIC	ENSMUSG00000022199.13	novel	2348	10	NA	NA	2	3	intron_retention	FALSE	canonical	1	1	junction_4	3.06394436993246	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTTCCCTCCCTGTGTT	NA	False	NA	-5	True	AATAAA	-33	NA	55150558	55144191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150188_55150323
Isoform_45156_13	chr14	-	2361	8	NIC	ENSMUSG00000022199.13	novel	2340	10	NA	NA	-9	3	intron_retention	FALSE	canonical	1	1	junction_4	3.10365156891435	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTTCCCTCCCTGTGTT	NA	False	NA	-5	True	AATAAA	-33	NA	55150569	55144191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150191_55150323
Isoform_45157_18	chr14	-	3445	6	FSM	ENSMUSG00000022203.8	ENSMUST00000022813.8	2705	6	-841	101	-629	-3	multi-exon	TRUE	canonical	3	20	junction_2	3.32264954516723	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCTGCTTCTTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	55164212	55154092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158639_55162894
Isoform_45162_3	chr14	-	9055	10	FSM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	-54	1396	-54	-1396	multi-exon	FALSE	canonical	3	30	junction_7	9.6966329907873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTTCTTTTTGTTTTG	NA	False	NA	-25	True	AATATA	-39	NA	55329835	55299114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
Isoform_45163_3	chr14	-	8738	10	FSM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	267	1392	-15	-1392	multi-exon	TRUE	canonical	3	30	junction_7	9.6966329907873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTTGTTTTGTTTT	NA	False	NA	-21	True	AATATA	-43	NA	55329514	55299110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
Isoform_45164_3	chr14	-	8992	10	FSM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	10	1395	10	-1395	multi-exon	FALSE	canonical	3	30	junction_7	9.6966329907873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTTCTTTTTGTTTTGT	NA	False	NA	-24	True	AATATA	-40	NA	55329771	55299113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
Isoform_45165_3	chr14	-	4474	9	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	-44	6200	-44	-255	5prime_fragment	FALSE	canonical	3	30	junction_6	5.85101486923423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGCTTCTTCCCTTCT	NA	False	NA	NA	False	NA	NA	NA	55329825	55303918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
Isoform_45166_3	chr14	-	3883	9	NNC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	5	-707	intron_retention	FALSE	canonical	3	8	junction_7	11.4673449411797	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCGTCTCTCACCTTCA	NA	False	NA	NA	False	NA	NA	NA	55329776	55304370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310432_55310669_55312742_55329464
Isoform_45170_221	chr14	-	2640	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	32	1	0	-1	multi-exon	FALSE	canonical	3	99	junction_4	12.8308372870802	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTAGCTGTGAAGTGG	NA	False	NA	-23	True	AATAAA	-15	NA	55344018	55336307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
Isoform_45172_20	chr14	-	2559	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	-15	129	-15	75	multi-exon	FALSE	canonical	3	99	junction_4	12.8308372870802	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAACTTTATTTAAAG	NA	False	NA	-22	True	AATAAA	-17	NA	55344065	55336435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
Isoform_45173_7	chr14	-	2916	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	32	-275	0	0	multi-exon	TRUE	canonical	3	99	junction_4	12.8308372870802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGAGTTTTGATGGCTGC	NA	False	NA	NA	False	AATAAA	-13	NA	55344018	55336031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
Isoform_45175_8	chr14	-	2616	22	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_21	29.2612751298063	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTAGCTGTGAAGTGG	NA	False	NA	-23	True	AATAAA	-15	NA	55343747	55336307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343717
Isoform_45177_5	chr14	-	2859	21	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	99	junction_4	13.1273569312333	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTAGCTGTGAAGTGG	NA	False	NA	-23	True	AATAAA	-15	NA	55344018	55336307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
Isoform_45179_26	chr14	-	866	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	-9	-2	-9	1	multi-exon	FALSE	canonical	3	89	junction_1	3.69966214673719	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGTATTTATTGTGTTT	NA	False	NA	-3	True	AATAAA	-19	NA	55822768	55818976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
Isoform_45181_3	chr14	-	674	3	FSM	ENSMUSG00000022217.15	ENSMUST00000174352.8	340	3	-338	4	18	1	multi-exon	FALSE	canonical	0	0	junction_1	49	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGTATTTATTGTGTTT	NA	False	NA	-3	True	AATAAA	-19	NA	55822741	55818976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55819201_55822135_55822213_55822368
Isoform_45182_714	chr14	-	839	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	123	0	9	0	multi-exon	FALSE	canonical	3	915	junction_9	61.4455856835949	714	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGTTGTTCATTGA	NA	False	NA	NA	False	AATAAA	-21	NA	55828421	55824897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
Isoform_45199_369	chr14	-	3475	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	50	321	-3	1	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAGGAAGCAGCTGTGA	9795	False	NA	-8	True	AATAAA	-20	NA	55873091	55863177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
Isoform_45202_377	chr14	-	3458	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	43	345	-10	-5	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCAGAGCTGTGACAT	9788	False	NA	-32	True	AATAAA	-25	NA	55873098	55863201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
Isoform_45203_53	chr14	-	3563	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	50	233	-3	1	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAGCTTTCTGCACAAAG	9795	False	NA	80	True	AATAAA	-23	NA	55873091	55863089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
Isoform_45205_33	chr14	-	3791	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	50	5	-3	-5	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAAAGTCCAGTGAGGC	9795	False	NA	NA	False	NA	NA	NA	55873091	55862861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
Isoform_45211_781	chr14	-	2475	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	-5	-88	-5	-4	multi-exon	FALSE	canonical	3	260	junction_2	41.5060236592232	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	5201	False	NA	44	True	AATAAA	-12	NA	55880802	55873428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
Isoform_45220_25	chr14	-	2302	6	NIC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	2	29	junction_5	125.802384715076	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	5200	False	NA	44	True	AATAAA	-12	NA	55880803	55873428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880586
Isoform_45221_60	chr14	-	2252	6	FSM	ENSMUSG00000002320.16	ENSMUST00000120041.8	2164	6	-95	7	-6	-4	multi-exon	FALSE	canonical	3	29	junction_5	125.802384715076	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	5200	False	NA	44	True	AATAAA	-12	NA	55880803	55873428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880636
Isoform_45222_18	chr14	-	2298	6	FSM	ENSMUSG00000002320.16	ENSMUST00000122358.8	2517	6	212	7	-34	-4	multi-exon	FALSE	canonical	2	8	junction_5	133.851260733696	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	4952	False	NA	44	True	AATAAA	-12	NA	55881051	55873428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880838
Isoform_45223_19	chr14	-	2308	6	NIC	ENSMUSG00000002320.16	novel	2517	6	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	134.620057940858	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	4727	False	NA	44	True	AATAAA	-12	NA	55881276	55873428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55881053
Isoform_45226_39	chr14	-	2536	5	NNC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	139.257854356586	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	5201	False	NA	44	True	AATAAA	-12	NA	55880802	55873428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_55874070_55875315_55875651_55877841_55878028_55878423_55879046_55880050
Isoform_45228_12	chr14	-	2620	3	ISM	ENSMUSG00000002320.16	ENSMUST00000132338.8	1742	5	177	1493	-6	770	intron_retention	FALSE	canonical	3	352	junction_1	8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAAAGCGT	5200	False	NA	NA	False	NA	NA	NA	55880803	55876782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_55878028_55878423_55879046_55880050
Isoform_45232_11	chr14	-	706	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	35	992	-22	887	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGTTGTTTCCATTTT	2320	False	NA	-16	True	ATTAAA	-34	NA	55897930	55896327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
Isoform_45233_169	chr14	-	1661	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	59	13	2	2	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAAGACAATTTTCTT	2344	False	NA	-21	True	AATAAA	-16	NA	55897906	55895348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
Isoform_45236_120	chr14	-	1730	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	2	-2	2	2	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAAGACAATTTTCTT	2344	False	NA	-21	True	AATAAA	-16	NA	55897906	55895348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
Isoform_4524_48	chr10	-	3912	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	2	1751	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCAGTGTCTCCTAC	4476	False	NA	-2	True	AATAAA	-18	NA	117212873	117183192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_45240_651	chr14	-	601	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	221	2	-26	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGACTCTTTCTTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	55909360	55899721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
Isoform_45241_382	chr14	-	806	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	18	0	18	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTCTTTCTTCTTGA	NA	False	NA	-11	True	AATAAA	-15	NA	55909563	55899719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
Isoform_45242_12	chr14	-	672	4	FSM	ENSMUSG00000010376.16	ENSMUST00000228414.2	516	4	-33	-123	-33	0	multi-exon	FALSE	canonical	3	19	junction_3	873.770501269578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTCTTTCTTCTTGA	NA	False	NA	-11	True	AATAAA	-15	NA	55909367	55899719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55900083_55900871_55900955_55901268_55901379_55909251
Isoform_45245_12	chr14	-	2474	9	FSM	ENSMUSG00000007589.10	ENSMUST00000227842.2	2001	9	-63	-410	-4	410	multi-exon	FALSE	canonical	3	16	junction_1	108.661170617659	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTGTTGTTAGTTTG	NA	False	NA	0	True	AATAAA	-18	NA	55919265	55913664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55914739_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_45246_507	chr14	-	1726	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	14	1216	-2	1125	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAACAGGCTTCTCTTA	NA	False	NA	-5	True	AATAAA	-35	NA	55919263	55916538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_45248_14	chr14	-	4599	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	14	-1657	-2	409	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTTGTTGTTAGTTT	NA	False	NA	-1	True	AATAAA	-17	NA	55919263	55913665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_4525_54	chr10	-	2168	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	2	7	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTTCACGTTATTTGA	4476	False	NA	-2	True	AATAAA	-23	NA	117212873	117184936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_45254_17	chr14	-	1611	8	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	1	1105	combination_of_known_junctions	FALSE	canonical	2	15	junction_5	121.452434629986	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919276	55916558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918456_55918547_55918681_55918769_55918846
Isoform_45256_23	chr14	-	1864	8	FSM	ENSMUSG00000007589.10	ENSMUST00000228264.2	3130	8	-24	1290	-6	1105	multi-exon	FALSE	canonical	3	280	junction_5	42.7532073030068	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919267	55916558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_45259_9	chr14	-	2098	7	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	0	1103	intron_retention	FALSE	canonical	3	280	junction_4	44.7167008323885	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919243	55916560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55916867_55916970_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_45279_72	chr14	-	2842	15	FSM	ENSMUSG00000022218.17	ENSMUST00000168729.8	2852	15	-3	13	-1	-3	multi-exon	FALSE	canonical	3	23	junction_14	53.0521499304684	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTCCTGTCTGTCTAGGC	395	False	NA	-11	True	AATAAA	-34	NA	55950952	55937478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950744
Isoform_45281_495	chr14	-	2725	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	-1	6	-1	-6	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGATGCTGTTTAGT	395	False	NA	-29	True	AATAAA	-16	NA	55950952	55937496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
Isoform_45282_27	chr14	-	2832	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	-109	7	-109	-7	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGATGCTGTTTAG	287	False	NA	-30	True	AATAAA	-15	NA	55951060	55937497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
Isoform_45283_37	chr14	-	2791	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	-68	7	-68	-7	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGATGCTGTTTAG	328	False	NA	-30	True	AATAAA	-15	NA	55951019	55937497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
Isoform_45288_118	chr14	-	1641	11	ISM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	2247	-5	204	5	3prime_fragment	FALSE	canonical	3	454	junction_10	29.2567940827426	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55957386	55953328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252
Isoform_45292_18	chr14	-	2338	15	ISM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	352	-5	352	5	3prime_fragment	FALSE	canonical	3	306	junction_12	81.9057447338596	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55959281	55953328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051
Isoform_45293_26	chr14	-	1918	15	ISM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	422	-16	335	-4	3prime_fragment	FALSE	canonical	3	306	junction_12	81.9057447338596	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGCTGCCCTGACAAC	NA	False	NA	-3	True	AATAAA	-35	NA	55959298	55953765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051
Isoform_45294_24	chr14	-	2582	16	FSM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	-30	-5	-4	5	multi-exon	FALSE	canonical	3	306	junction_12	87.1219834484959	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55959663	55953328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
Isoform_45296_27	chr14	-	2142	16	FSM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	-29	434	-3	-6	multi-exon	FALSE	canonical	3	306	junction_12	87.1219834484959	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTACTGCTGCCCTGACA	NA	False	NA	-5	True	AATAAA	-33	NA	55959662	55953767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
Isoform_45298_133	chr14	-	2421	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	5	456	5	5	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55959654	55953328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
Isoform_45299_187	chr14	-	1986	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	4	892	4	-3	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTGCCCTGACAACA	NA	False	NA	-2	True	AATAAA	-36	NA	55959655	55953764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
Isoform_45300_234	chr14	-	2333	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	6	-453	0	5	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55959714	55953328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
Isoform_45302_260	chr14	-	1897	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	6	-17	0	-3	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTGCCCTGACAACA	NA	False	NA	-2	True	AATAAA	-36	NA	55959714	55953764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
Isoform_45314_18	chr14	-	2428	16	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	0	3	intron_retention	FALSE	canonical	3	119	junction_15	118.227389193687	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAAGCTTTCTCAC	NA	False	NA	NA	False	NA	NA	NA	55959714	55953330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
Isoform_45320_164	chr14	-	1403	9	FSM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	73	1	-18	-1	multi-exon	FALSE	canonical	3	126	junction_7	15.4833580014156	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGAGTTCTCATTCTG	NA	False	NA	-1	True	AATAAA	-19	NA	55983074	55976477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
Isoform_45323_48	chr14	-	2081	9	ISM	ENSMUSG00000022221.15	ENSMUST00000168716.8	1964	10	38	-1	-31	0	intron_retention	FALSE	canonical	3	118	junction_2	9.25928587959136	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026276	56022451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694
Isoform_45326_349	chr14	-	1846	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	46	0	-31	0	multi-exon	FALSE	canonical	3	118	junction_2	8.73194786861711	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026276	56022451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
Isoform_45327_125	chr14	-	1879	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	13	0	5	0	multi-exon	FALSE	canonical	3	118	junction_2	8.73194786861711	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026309	56022451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
Isoform_45329_9	chr14	-	2290	8	NIC	ENSMUSG00000022221.15	novel	1892	10	NA	NA	18	0	intron_retention	FALSE	canonical	3	118	junction_2	9.43938773524674	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026296	56022451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024618_56024738_56024897_56025280_56025591_56025694
Isoform_4533_27	chr10	-	6502	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-12	2	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTGCAGTTTGTTCT	4503	False	NA	-10	True	AATAAA	-15	NA	117212846	117180575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_45332_9	chr14	-	1363	6	FSM	ENSMUSG00000022223.10	ENSMUST00000227163.2	792	6	-21	-550	4	-2	multi-exon	FALSE	canonical	2	4	junction_5	71.6753793153549	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCACTGGCTTCCGCTGTC	NA	False	NA	-8	True	AATAAA	-18	NA	56137662	56134741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137483
Isoform_45333_25	chr14	-	1226	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	29	0	-1	0	multi-exon	FALSE	canonical	3	98	junction_5	35.4547599061113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	-6	True	AATAAA	-20	NA	56137686	56134739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
Isoform_45335_4	chr14	-	1127	5	NIC	ENSMUSG00000022223.10	novel	1255	6	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	74.2866071374915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTCCGCTGTCTCTTT	NA	False	NA	-3	True	AATAAA	-23	NA	56137667	56134736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_56135470_56135699_56135844_56136640_56136763_56137270_56137378_56137646
Isoform_45336_3	chr14	-	1298	6	FSM	ENSMUSG00000022223.10	ENSMUST00000227032.2	1023	6	0	-275	0	-1	multi-exon	FALSE	canonical	3	22	junction_2	63.0441115410472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTTCCGCTGTCT	NA	False	NA	-7	True	AATAAA	-19	NA	56137668	56134740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56135470_56135699_56135935_56136640_56136763_56137103_56137187_56137270_56137378_56137646
Isoform_45337_3	chr14	-	2123	2	ISM	ENSMUSG00000022223.10	ENSMUST00000228209.2	846	4	-230	-622	-1	-8	intron_retention	FALSE	canonical	3	191	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTAGATCACTGGCTTCC	NA	False	NA	-14	True	AATAAA	-12	NA	56137667	56134747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_56135844_56136640
Isoform_45338_10	chr14	-	2230	4	FSM	ENSMUSG00000022223.10	ENSMUST00000228151.2	385	4	2	-1847	-1	-4	multi-exon	FALSE	canonical	3	98	junction_3	32.0312347560939	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCACTGGCTTCCGCTG	NA	False	NA	-10	True	AATAAA	-16	NA	56137667	56134743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56136763_56137103_56137187_56137270_56137378_56137646
Isoform_45339_107	chr14	-	4340	17	NIC	ENSMUSG00000064128.9	novel	4363	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	11.6039796513955	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTTACATTCTTTGAA	2394	False	NA	NA	False	AATAAA	-45	NA	56809301	56764217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194
Isoform_45345_391	chr14	-	2032	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	1	2081	1	1195	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTCTTAGTGGTATTC	NA	False	NA	-3	True	AATAAA	-22	NA	57015772	56960247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
Isoform_45346_296	chr14	-	2375	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	1	1738	1	1538	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGTTTGAAAGTAA	NA	False	NA	-7	True	AATAAA	-15	NA	57015772	56959904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
Isoform_45347_63	chr14	-	2061	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	-30	2083	-30	1193	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTTCTTAGTGGTAT	NA	False	NA	-5	True	AATAAA	-20	NA	57015803	56960249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
Isoform_45348_44	chr14	-	2401	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	-25	1738	-25	1538	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGTTTGAAAGTAA	NA	False	NA	-7	True	AATAAA	-15	NA	57015798	56959904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
Isoform_45354_15	chr14	-	3034	8	FSM	ENSMUSG00000040123.18	ENSMUST00000111285.9	5351	8	-18	2335	-18	405	multi-exon	FALSE	canonical	3	22	junction_6	24.4798959581623	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8803	False	NA	1	True	NA	NA	NA	57049191	57030379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
Isoform_45356_20	chr14	-	3003	8	FSM	ENSMUSG00000040123.18	ENSMUST00000111285.9	5351	8	13	2335	-6	405	multi-exon	FALSE	canonical	3	22	junction_6	24.4798959581623	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8834	False	NA	1	True	NA	NA	NA	57049160	57030379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
Isoform_45357_3	chr14	-	2850	7	NIC	ENSMUSG00000040123.18	novel	5357	8	NA	NA	51	404	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	28.8963665535998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTGTTTTCTTGT	9124	False	NA	0	True	NA	NA	NA	57048870	57030380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048790
Isoform_45358_25	chr14	-	2883	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-6	405	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8834	False	NA	1	True	NA	NA	NA	57049160	57030379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
Isoform_45362_25	chr14	-	2910	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-19	400	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTTATTTTTGTTTTC	8802	False	NA	-4	True	NA	NA	NA	57049192	57030384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
Isoform_45363_3	chr14	-	5253	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTCTTTGGTGAAAATG	8798	False	NA	-14	True	AATAAA	-27	NA	57049196	57028045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
Isoform_45364_4	chr14	-	5221	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGGTGAAAATGAGAT	8834	False	NA	-10	True	AATAAA	-31	NA	57049160	57028041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
Isoform_45366_5	chr14	-	3771	6	NIC	ENSMUSG00000040123.18	novel	2455	7	NA	NA	-18	405	intron_retention	FALSE	canonical	3	42	junction_5	17.1464281994822	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8803	False	NA	1	True	NA	NA	NA	57049191	57030379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_57031958_57034060_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
Isoform_45367_4	chr14	-	2674	2	FSM	ENSMUSG00000048582.8	ENSMUST00000223792.2	284	2	-5	-2385	-5	1	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCTGTGTAAGAACGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	57295185	57271915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57274388_57294983
Isoform_45373_14	chr14	-	2397	2	FSM	ENSMUSG00000046352.8	ENSMUST00000055698.8	2406	2	2	7	2	-7	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGACCAATGGTAAGTT	NA	False	NA	NA	False	ATTAAA	-29	NA	57342157	57336063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57338229_57341925
Isoform_45374_49	chr14	-	1450	8	FSM	ENSMUSG00000021947.12	ENSMUST00000022517.9	1497	8	6	41	6	-41	multi-exon	TRUE	canonical	3	19	junction_7	4.40778532015472	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGCTTATTCTG	NA	False	NA	-4	True	AATAAA	-14	NA	57635980	57512490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600378_57600506_57620214_57620323_57635864
Isoform_45376_145	chr14	-	830	5	FSM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	8	-2	8	1	multi-exon	FALSE	canonical	3	133	junction_4	52.3115665986023	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCATGAGGTTGAGAT	NA	False	NA	-7	True	AATAAA	-21	NA	57809018	57787052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
Isoform_45378_5	chr14	-	674	4	NIC	ENSMUSG00000021951.8	novel	880	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	119.268138615847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTCATGAGGTTGAGA	NA	False	NA	-8	True	AATAAA	-20	NA	57809026	57787053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_57787337_57787818_57788100_57795490_57795574_57808999
Isoform_45380_13	chr14	-	3931	24	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	-20	21	combination_of_known_junctions	FALSE	canonical	2	67	junction_22	80.9376057852328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGATCCTTTCTGCAAA	NA	False	NA	NA	False	AATAAA	-21	NA	57902712	57819706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
Isoform_45381_108	chr14	-	3489	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	467	4724	1	26	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTTCTGCAAAGTGCA	NA	False	NA	NA	False	AATAAA	-26	NA	57902420	57819701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
Isoform_45383_4	chr14	-	7959	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	469	252	3	-252	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGACTTTTAAGTTTTT	NA	False	NA	-3	True	ATTAAA	-14	NA	57902418	57815229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
Isoform_45384_18	chr14	-	3762	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	194	4724	-1	26	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTTCTGCAAAGTGCA	NA	False	NA	NA	False	AATAAA	-26	NA	57902693	57819701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
Isoform_45385_6	chr14	-	4015	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	460	4205	-3	545	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACAGGTTTTGTGCTTTCC	NA	False	NA	NA	False	AATACA	-19	NA	57902427	57819182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
Isoform_45389_3	chr14	-	2854	5	FSM	ENSMUSG00000021952.17	ENSMUST00000172524.2	1078	5	469	-2245	3	1995	multi-exon	FALSE	canonical	3	7	junction_1	126.317061397105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATTTTCTAGTTCTTG	NA	False	NA	NA	False	AATAAA	-13	NA	57902418	57877240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57879618_57880538_57880681_57880791_57880947_57885875_57885982_57902344
Isoform_45391_5	chr14	-	1832	4	FSM	ENSMUSG00000021952.17	ENSMUST00000172539.8	707	4	-6	-1119	-3	1119	multi-exon	FALSE	canonical	3	7	junction_1	139.907906217705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTAAGTTTTTTTAAAG	NA	False	NA	NA	False	ATTAAA	-20	NA	57902427	57878116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57879618_57880538_57880681_57885875_57885982_57902344
Isoform_45392_5	chr14	-	2712	4	FSM	ENSMUSG00000021952.17	ENSMUST00000172539.8	707	4	-6	-1999	-3	1999	multi-exon	FALSE	canonical	3	7	junction_1	139.907906217705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTAGTTCTTGCCAA	NA	False	NA	NA	False	AATAAA	-17	NA	57902427	57877236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57879618_57880538_57880681_57885875_57885982_57902344
Isoform_45394_5	chr14	-	5129	8	FSM	ENSMUSG00000021959.17	ENSMUST00000022531.14	5191	8	61	1	43	-1	multi-exon	FALSE	canonical	2	5	junction_5	7.14856914468389	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTTCATTTGTGGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	57983519	57927119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_57929228_57931770_57931878_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
Isoform_45398_586	chr14	-	2266	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	-5	-1	-5	1	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGTTGCCAACTCT	NA	False	NA	-6	True	AATAAA	-20	NA	58063625	58044016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
Isoform_45399_12	chr14	-	5152	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	-4	-2888	-4	2888	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGGTTTTTGCTTACT	NA	False	NA	NA	False	AATAAA	-20	NA	58063624	58041129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
Isoform_45405_7	chr14	-	3730	8	NIC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-10	2	intron_retention	FALSE	canonical	3	189	junction_3	22.2288652202399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATGTTGCCAACTCTG	NA	False	NA	-5	True	AATAAA	-21	NA	58063652	58044015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_58044989_58045431_58045536_58047399_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
Isoform_45416_7	chr14	-	5193	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	-79	72	-79	-72	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTTTTTTAATGGT	NA	False	NA	-14	True	AATAAA	-13	NA	58127812	58070231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
Isoform_45422_8	chr14	-	5016	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	15	-78	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATATTGTCTTGTTTTTT	NA	False	NA	-20	True	AATAAA	-7	NA	58127718	58070237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
Isoform_45423_246	chr14	-	2311	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	18	0	18	0	multi-exon	FALSE	canonical	3	153	junction_3	66.5872943480589	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTCTCTCATCCATTC	NA	False	NA	-1	True	NA	NA	NA	58236701	58153717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
Isoform_45427_13	chr14	-	1028	9	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	-2	7600	-2	85	5prime_fragment	FALSE	canonical	3	228	junction_1	35.692261065951	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAACTCAGACTACCCTG	NA	False	NA	NA	False	AGTAAA	-11	NA	58236721	58161317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
Isoform_45432_318	chr14	-	1333	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5085	-6	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	39.5924235176378	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGAAGTGTGCACC	NA	False	NA	-7	True	AATAAA	-10	NA	59608004	59586186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
Isoform_45434_13	chr14	-	1357	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5109	-6	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	39.5924235176378	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGAAGTGTGCACC	NA	False	NA	-7	True	AATAAA	-10	NA	59608028	59586186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
Isoform_45437_7	chr14	-	1457	12	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5086	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	138.460245808757	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGAAGTGTGCACC	NA	False	NA	-7	True	AATAAA	-10	NA	59608005	59586186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593476_59593600_59593765_59593900_59596924_59597033_59599182_59599305_59607902
Isoform_45438_7	chr14	-	1201	10	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5085	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	114.002923939111	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGAAGTGTGCACC	NA	False	NA	-7	True	AATAAA	-10	NA	59608004	59586186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
Isoform_45440_18	chr14	-	1121	9	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5077	-6	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	114.076728564594	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGAAGTGTGCACC	NA	False	NA	-7	True	AATAAA	-10	NA	59607996	59586186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59586501_59586670_59586838_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
Isoform_45444_202	chr14	-	1503	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5085	-6	intron_retention	FALSE	canonical	3	300	junction_3	34.2669260690571	202	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGAAGTGTGCACC	NA	False	NA	-7	True	AATAAA	-10	NA	59608004	59586186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
Isoform_45450_8	chr14	-	1301	8	NNC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	-5087	-6	intron_retention	FALSE	canonical	3	27	junction_1	121.308175608191	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGAAGTGTGCACC	NA	False	NA	-7	True	AATAAA	-10	NA	59608006	59586186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59586838_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
Isoform_45452_7	chr14	-	5226	7	NNC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	-5078	-1	intron_retention	FALSE	canonical	3	329	junction_3	34.8684033984287	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGTGTGCACCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	59607997	59586181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
Isoform_45454_13	chr14	-	4058	23	Fusion	ENSMUSG00000091144.3_ENSMUSG00000071350.13	novel	2995	14	NA	NA	-2	-6	intron_retention	FALSE	canonical	2	9	junction_9	48.8120023175441	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACTGAAGAGTTCACA	NA	False	NA	-7	True	AATAAA	-10	NA	59678328	59618287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59639782_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
Isoform_45455_162	chr14	-	2988	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	5	2	-2	0	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTTGTGATTATT	NA	False	NA	NA	False	TATAAA	-11	NA	59678328	59639459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
Isoform_45458_3	chr14	-	4698	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	45	-1748	34	1748	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACACCTCCCATGTATGG	NA	False	NA	NA	False	AATAAA	-32	NA	59678288	59637709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
Isoform_45459_4	chr14	-	4264	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	1	-1270	1	1270	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTCTATTTTCTTAG	NA	False	NA	NA	False	ATTAAA	-24	NA	59678332	59638187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
Isoform_45460_17	chr14	-	2918	13	NIC	ENSMUSG00000071350.13	novel	2995	14	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	30.6467326516584	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATTTGTTTTTGTGAT	NA	False	NA	NA	False	TATAAA	-7	NA	59678328	59639463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
Isoform_45461_3	chr14	-	2826	12	NIC	ENSMUSG00000071350.13	novel	2995	14	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	35.0074372263527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTTTGTGATTATTA	NA	False	NA	NA	False	TATAAA	-12	NA	59678328	59639458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59668591_59668718_59674885_59675215_59678035
Isoform_45462_65	chr14	-	2228	10	FSM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	2	-28	2	28	multi-exon	FALSE	canonical	3	30	junction_1	34.1362556619393	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTGGTGTTGTTGTTG	NA	False	NA	-4	True	NA	NA	NA	59835391	59801396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
Isoform_45464_11	chr14	-	1884	10	FSM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	2	6	2	-6	multi-exon	FALSE	canonical	3	10	junction_1	37.821543276319	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGAACAGCTTCATAG	NA	False	NA	NA	False	AATAAA	-23	NA	59835391	59805183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
Isoform_45465_3	chr14	-	3160	10	NNC	ENSMUSG00000021982.15	novel	1892	10	NA	NA	3	-5	intron_retention	FALSE	canonical	2	6	junction_5	42.9343455137185	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGAACAGCTTCATAGT	NA	False	NA	NA	False	AATAAA	-24	NA	59835405	59805182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59822250_59822603_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
Isoform_45466_3	chr14	-	3149	10	NNC	ENSMUSG00000021982.15	novel	1892	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_5	43.112256571266	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCTTCATAGTGTATA	NA	False	NA	NA	False	AATAAA	-29	NA	59835393	59805177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59822250_59822599_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
Isoform_45467_6	chr14	-	2497	5	FSM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	11	71	0	-71	multi-exon	FALSE	canonical	3	110	junction_3	7.29297607290741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTCCACTTGCTATTC	NA	False	NA	NA	False	TATAAA	-18	NA	59835384	59822092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
Isoform_45470_5	chr14	-	2562	5	FSM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	7	10	0	-10	multi-exon	FALSE	canonical	3	110	junction_3	7.29297607290741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTCAAGGAAAAAAATAG	NA	False	NA	NA	False	TATAAA	-27	NA	59835388	59822031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
Isoform_45476_460	chr14	-	3826	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	88	-1	-13	1	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTAGGTCTCAGCAG	NA	False	NA	-15	True	AATAAA	-19	NA	60488868	60455525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
Isoform_45480_26	chr14	-	3884	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	30	-1	2	1	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTAGGTCTCAGCAG	NA	False	NA	-15	True	AATAAA	-19	NA	60488926	60455525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
Isoform_45486_10	chr14	-	5251	14	FSM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	25	-2340	-14	1	multi-exon	FALSE	canonical	3	173	junction_1	24.6028814399438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTAGGTCTCAGCAG	NA	False	NA	-15	True	AATAAA	-19	NA	60488869	60455525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
Isoform_45489_51	chr14	-	6270	12	ISM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	26	3571	-13	0	5prime_fragment	FALSE	canonical	3	198	junction_5	17.8552490140959	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAAACATTGTC	NA	False	NA	NA	False	NA	NA	NA	60488868	60461436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
Isoform_45493_69	chr14	-	4021	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111236.4	3958	10	-37	-26	-37	26	multi-exon	FALSE	canonical	3	37	junction_9	15.475986974649	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	0	True	AATAAA	-21	NA	61275436	61201297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
Isoform_45494_34	chr14	-	4268	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111234.10	4051	10	-30	-187	-9	26	multi-exon	FALSE	canonical	3	46	junction_9	13.3813948598441	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	0	True	AATAAA	-21	NA	61283948	61201297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
Isoform_45502_3	chr14	-	4408	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111234.10	4051	10	-157	-200	-136	39	multi-exon	FALSE	canonical	3	46	junction_9	13.3813948598441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATGATTTTGTAGTTG	NA	False	NA	13	True	AATAAA	-34	NA	61284075	61201284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
Isoform_45504_21	chr14	-	3515	6	NNC	ENSMUSG00000060548.14	novel	1087	6	NA	NA	-6299	26	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	25.9615099714943	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	0	True	AATAAA	-21	NA	61219633	61201297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61219532
Isoform_45506_5	chr14	-	640	5	ISM	ENSMUSG00000060548.14	ENSMUST00000225730.2	744	6	-96	22050	-37	-22050	5prime_fragment	FALSE	canonical	3	37	junction_4	19.6532440070335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	61275436	61234020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
Isoform_45507_303	chr14	-	847	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	-5	9250	-5	-1227	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGGTGTGACTTAGTA	NA	False	NA	-6	True	ATTAAA	-17	NA	61597893	61578440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
Isoform_45508_10	chr14	-	1068	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	-15	9039	-15	-1016	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61597903	61578229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
Isoform_45528_1370	chr14	-	4270	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-201	0	-201	0	multi-exon	TRUE	canonical	2	379	junction_16	73.5790391347971	1370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTGAAAGACTTATT	6345	False	NA	-12	True	AATAAA	-22	NA	61677524	61602659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
Isoform_45539_99	chr14	-	1019	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	129	2854	1	-542	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAATTGAGTGATTATT	NA	False	NA	-6	True	TATAAA	-43	NA	61794206	61772295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
Isoform_4554_144	chr10	-	3117	11	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	485	20	19	0	3prime_fragment	FALSE	canonical	3	473	junction_6	30.8506077735918	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117546178	117524799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
Isoform_45540_28	chr14	-	1986	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	129	1887	1	425	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGATTTTCATGGTGT	NA	False	NA	0	True	AATAAA	-21	NA	61794206	61771328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
Isoform_45548_4	chr14	-	1073	6	NNC	ENSMUSG00000021930.15	novel	4002	5	NA	NA	25	-545	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	67.8751795577735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGTAATTGAGTGATT	NA	False	NA	-9	True	TATAAA	-40	NA	61794182	61772298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61792219_61792301_61793969
Isoform_45549_3	chr14	-	1895	4	FSM	ENSMUSG00000021930.15	ENSMUST00000100496.5	1459	4	-13	-423	-13	423	multi-exon	FALSE	canonical	3	20	junction_1	60.8075287736277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGTGATTTTCATGGT	NA	False	NA	-2	True	AATAAA	-19	NA	61794220	61771330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61772691_61783130_61783298_61787192_61787310_61793969
Isoform_45550_4	chr14	-	2442	3	FSM	ENSMUSG00000097589.10	ENSMUST00000180917.9	3544	3	26	1076	-9	-1076	multi-exon	FALSE	canonical	2	7	junction_2	6	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGAAAAATTATTTTGG	NA	False	NA	NA	False	AGTAAA	-24	NA	61886245	61870873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_61873041_61880808_61880905_61886066
Isoform_45552_12	chr14	-	1370	2	FSM	ENSMUSG00000048281.10	ENSMUST00000063169.10	1314	2	-50	-6	34	6	multi-exon	FALSE	canonical	3	18	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCTCTTACTGACTC	617	False	NA	NA	False	ATTAAA	-19	NA	62530462	62513673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_62514558_62529976
Isoform_45555_18	chr14	-	3703	18	FSM	ENSMUSG00000035161.8	ENSMUST00000223585.2	10883	18	-25	7205	1	-7205	multi-exon	FALSE	canonical	3	25	junction_12	114.295797874483	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998586	62930457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951289_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
Isoform_45565_303	chr14	-	3706	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7205	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998586	62930457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
Isoform_45570_56	chr14	-	6395	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-4516	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGGTCCACCTTGGCTT	NA	False	NA	-6	True	AATAAA	-23	NA	62998586	62927768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
Isoform_4558_444	chr10	-	3008	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	72	19	-1	1	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546591	117524798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
Isoform_45584_131	chr14	-	3675	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7206	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTGTGGTTTAGGAA	NA	False	NA	-7	True	AATAAA	-12	NA	62998586	62930458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
Isoform_4559_13	chr10	-	3106	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	-27	20	-27	0	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117546690	117524799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
Isoform_45590_37	chr14	-	6367	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-4514	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCCACCTTGGCTTGA	NA	False	NA	-4	True	AATAAA	-25	NA	62998586	62927766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
Isoform_456_72	SIRV12003	+	12000	1	FSM	SIRV12003A	SIRV12003	12000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV12003_+_0_12000
Isoform_4560_267	chr10	-	3070	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	10	19	10	1	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546653	117524798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
Isoform_45602_73	chr14	-	1832	7	FSM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	-49	1265	-49	-1262	multi-exon	FALSE	canonical	3	727	junction_5	64.1242283904194	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGCAACTGGTCCT	2833	False	NA	-46	True	AATAGA	-1	NA	63402423	63383863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980
Isoform_45606_1516	chr14	-	1651	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-53	1262	-49	-1262	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGCAACTGGTCCT	4258	False	NA	-46	True	AATAGA	-1	NA	63415295	63383863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
Isoform_45608_65	chr14	-	1726	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-118	1252	-114	-1252	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTCCTTGTCTTTCTC	4193	False	NA	-36	True	AATAGA	-11	NA	63415360	63383853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
Isoform_45612_22	chr14	-	3439	7	FSM	ENSMUSG00000021944.16	ENSMUST00000118022.8	3374	7	-57	-8	-34	8	multi-exon	FALSE	canonical	2	8	junction_5	3.67045259092421	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTTCTAACGGGCCTG	NA	False	NA	NA	False	AATAAA	-27	NA	63482754	63436362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442205_63477984_63479095_63482599
Isoform_45613_20	chr14	-	3445	7	FSM	ENSMUSG00000021944.16	ENSMUST00000067417.10	3400	7	-40	-5	-40	5	multi-exon	FALSE	canonical	2	7	junction_5	3.90156663690654	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTCTTTTCTAACGGGC	NA	False	NA	NA	False	AATAAA	-24	NA	63482760	63436365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442208_63477984_63479095_63482599
Isoform_45645_2540	chr14	-	1446	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	324	111	-12	-111	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	2540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746217	63729906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_45647_75	chr14	-	2592	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	219	-930	-117	930	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTTCCAGTATATTA	NA	False	NA	0	True	NA	NA	NA	63746322	63728865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_45648_73	chr14	-	1732	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	148	1	148	-1	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTTTTACTTAGGAT	NA	False	NA	-17	True	ATTAAA	-17	NA	63746393	63729796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_45649_1337	chr14	-	1548	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	222	111	-114	-111	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746319	63729906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_45651_1138	chr14	-	1555	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	325	1	-11	-1	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTTTTACTTAGGAT	NA	False	NA	-17	True	ATTAAA	-17	NA	63746216	63729796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_45652_777	chr14	-	1662	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	217	2	-119	-2	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63746324	63729797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_45653_119	chr14	-	1607	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	163	111	163	-111	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746378	63729906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_45676_67	chr14	-	2404	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	28	138	28	-138	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGTTTTGGACTAACAA	NA	False	NA	-48	True	TATAAA	-18	NA	63781403	63761063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_45677_6	chr14	-	2179	11	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	286	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.1855812277531	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACAGGTGTGGTCCTCTG	NA	False	NA	31	True	GATAAA	-13	NA	63781145	63760984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_63761030_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_4568_44	chr10	-	3012	10	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	135.429996494932	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117546158	117524799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850
Isoform_45681_37	chr14	-	5446	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	12	-2888	12	-938	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTCATAATCTACTG	NA	False	NA	-13	True	AATAAA	-17	NA	63781419	63758037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_45687_8	chr14	-	6126	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	270	-3826	270	0	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATGGAATCTGGTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	63781161	63757099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_45688_11	chr14	-	5507	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	-50	-2887	-50	-939	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTCATAATCTACT	NA	False	NA	-14	True	AATAAA	-16	NA	63781481	63758038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_45690_77	chr14	-	1336	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14988	0	2	0	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCGCCTGCTGTGAGTC	NA	False	NA	-4	True	AATAAA	-20	NA	64678364	64360073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
Isoform_45692_4	chr14	-	912	3	NNC	ENSMUSG00000054733.10	novel	1860	11	NA	NA	204203	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	37	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCGCCTGCTGTGAGTC	5767	False	NA	-4	True	AATAAA	-20	NA	64450194	64360073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_64360803_64447876_64447984_64450118
Isoform_45693_19	chr14	-	3412	11	NIC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	11.4873843846195	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCTGTCCGGGATTTC	7665	False	NA	NA	False	AATAAA	-13	NA	65187319	65049049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_65050869_65054465_65054586_65063049_65063142_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
Isoform_45697_42	chr14	-	3401	11	FSM	ENSMUSG00000021972.15	ENSMUST00000022544.14	3396	11	-6	1	0	-1	multi-exon	FALSE	canonical	3	23	junction_3	9.87167665596883	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCTGTCCGGGATTTC	7679	False	NA	NA	False	AATAAA	-13	NA	65187305	65049049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_65050869_65054465_65054586_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
Isoform_45698_10	chr14	-	3397	11	NNC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	12.983065893694	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCTGTCCGGGATTTC	7677	False	NA	NA	False	AATAAA	-13	NA	65187307	65049049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_65050869_65054465_65054586_65063049_65063139_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
Isoform_45699_3	chr14	-	3279	10	NIC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.16873414375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGGCTGTCCGGGATTT	7680	False	NA	NA	False	AATAAA	-12	NA	65187304	65049050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_65050869_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
Isoform_45709_192	chr14	-	5943	7	FSM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	31	3	30	0	multi-exon	FALSE	canonical	3	124	junction_6	16.5797734872612	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335524	65289511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
Isoform_4571_24	chr10	-	3040	10	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	135.429996494932	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546185	117524798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850
Isoform_45710_76	chr14	-	6030	7	FSM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	-56	3	-56	0	multi-exon	FALSE	canonical	3	124	junction_6	16.5797734872612	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335611	65289511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
Isoform_45712_58	chr14	-	5945	7	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	49.9355139710763	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65387339	65289511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65387258
Isoform_45714_5	chr14	-	6248	7	NNC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	52	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	56.8870713685358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGTTTGGAGGTGTT	NA	False	NA	-6	True	NA	NA	NA	65335502	65289514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65318255_65335445
Isoform_45716_8	chr14	-	5942	6	NIC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	51.808879547815	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335619	65289511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65335445
Isoform_45717_43	chr14	-	5847	6	NIC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	51.808879547815	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335524	65289511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65335445
Isoform_45718_10	chr14	-	5848	6	NIC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	62.4864785373604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65387338	65289511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65387258
Isoform_45720_26	chr14	-	2852	3	ISM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	12	23472	11	2218	5prime_fragment	FALSE	canonical	3	124	junction_2	10.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGCCTCTAGTTTTTAT	NA	False	NA	NA	False	AATAAA	-45	NA	65335543	65312980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_65315639_65317828_65317925_65335445
Isoform_45721_5	chr14	-	4150	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	10	8574	10	-8574	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	65499902	65438471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
Isoform_45722_20	chr14	-	2829	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	17	9888	17	7382	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATTTCTATGCAAGG	NA	False	NA	NA	False	AATAAA	-18	NA	65499895	65439785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
Isoform_45733_552	chr14	-	2821	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	27	3	2	-3	multi-exon	FALSE	canonical	3	390	junction_14	46.0192949772602	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTCGTCGTGTGGTGC	3471	False	NA	NA	False	AATAAA	-13	NA	65830497	65767900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
Isoform_45734_517	chr14	-	2856	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	-8	3	-8	-3	multi-exon	FALSE	canonical	3	390	junction_14	46.0192949772602	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTCGTCGTGTGGTGC	3436	False	NA	NA	False	AATAAA	-13	NA	65830532	65767900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
Isoform_45736_337	chr14	-	2785	15	FSM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	-17	3	6	-3	multi-exon	FALSE	canonical	3	153	junction_14	90.9467493893531	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTCGTCGTGTGGTGC	3450	False	NA	NA	False	AATAAA	-13	NA	65830518	65767900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
Isoform_4574_33	chr10	-	2998	11	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	136.92187553492	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546666	117524798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850_117545934_117546456
Isoform_45742_1634	chr14	-	2837	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	76	0	-10	0	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6420	False	NA	-11	True	ATTAAA	-14	NA	66071367	66056486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
Isoform_45744_99	chr14	-	2886	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	27	0	27	0	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6371	False	NA	-11	True	ATTAAA	-14	NA	66071416	66056486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
Isoform_45747_100	chr14	-	3398	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	76	-561	-10	561	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTACTGGTTTATTGT	6420	False	NA	0	True	NA	NA	NA	66071367	66055925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
Isoform_45758_28	chr14	-	3392	10	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	933	junction_7	64.172991511275	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTCAGTGGCTT	6420	False	NA	-12	True	ATTAAA	-13	NA	66071367	66056487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
Isoform_4576_198	chr10	-	3533	5	FSM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	-43	-1	-43	1	multi-exon	FALSE	canonical	3	51	junction_4	6.41774882649672	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTGATAAGCAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	117582313	117569582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
Isoform_45766_18	chr14	-	2271	12	FSM	ENSMUSG00000034450.9	ENSMUST00000059970.9	2263	12	-14	6	-14	-6	multi-exon	FALSE	canonical	2	4	junction_5	1.97086212624353	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATATCTTTTTGCCCTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	66246670	66224240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_66225144_66225630_66225722_66227827_66227993_66228478_66228629_66234272_66234350_66235008_66235117_66237282_66237469_66240039_66240131_66241530_66241626_66243285_66243412_66245487_66245590_66246493
Isoform_45769_579	chr14	-	2037	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	2	-4	2	1	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTGTTCTTGAGAA	NA	False	NA	-1	True	AATAAA	-20	NA	66361947	66321821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
Isoform_4577_3	chr10	-	3070	5	FSM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	-66	485	-66	-485	multi-exon	FALSE	canonical	3	51	junction_4	6.41774882649672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCATTGTCTGCTGTGT	NA	False	NA	NA	False	ACTAAA	-15	NA	117582336	117570068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
Isoform_45770_57	chr14	-	2101	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	-62	-4	-62	1	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTGTTCTTGAGAA	NA	False	NA	-1	True	AATAAA	-20	NA	66362011	66321821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
Isoform_45773_12	chr14	-	2117	19	NNC	ENSMUSG00000022040.9	novel	2035	19	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_18	48.1696141607452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTGTTCTTGAGAA	NA	False	NA	-1	True	AATAAA	-20	NA	66361947	66321821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361703
Isoform_45774_11	chr14	-	1914	18	NIC	ENSMUSG00000022040.9	novel	2035	19	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	51.6540930490481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTGTTCTTGAGAA	NA	False	NA	-1	True	AATAAA	-20	NA	66361947	66321821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66345425_66345617_66347564_66347725_66354159_66354245_66361783
Isoform_45778_16	chr14	-	3967	31	FSM	ENSMUSG00000059456.14	ENSMUST00000022622.14	4034	31	66	1	-4	0	multi-exon	FALSE	canonical	2	2	junction_25	4.30103346753881	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGACTGTGTCGGTTAT	NA	False	NA	0	True	ATTAAA	-25	NA	66518435	66390706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072_66413191_66414511_66414614_66415140_66415216_66415484_66415626_66416040_66416096_66416279_66416343_66424891_66424972_66427022_66427111_66427504_66427684_66450760_66451002_66518331
Isoform_4578_8	chr10	-	3543	5	NNC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-44	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.0613955098562	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTGATAAGCAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	117582314	117569582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_117572139_117576416_117576500_117576657_117576817_117580632_117580753_117581689
Isoform_45783_207	chr14	-	3193	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	39	6	18	-6	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGCCTGTCCATATAT	NA	False	NA	-18	True	ATTAAA	-10	NA	67246287	67222693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
Isoform_45785_179	chr14	-	3229	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	2	7	2	-7	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGCCTGTCCATATA	NA	False	NA	-19	True	ATTAAA	-9	NA	67246324	67222694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
Isoform_45805_316	chr14	-	3404	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-8	614	-8	4	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAATTTGTATTTAAACA	NA	False	NA	-4	True	AATAAA	-25	NA	67309901	67252118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
Isoform_45806_618	chr14	-	2402	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-8	1616	-8	2	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATCTGGTTTTCTTTTT	NA	False	NA	-3	True	AATAAA	-15	NA	67309901	67253120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
Isoform_45807_144	chr14	-	2096	11	NNC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	1	-265	at_least_one_novel_splicesite	TRUE	non_canonical	3	285	junction_10	142.73475400196	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAGCATTCCTCCTCT	NA	False	NA	-16	True	ATTAAA	-21	NA	67309883	67253387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538_67309797_67309817
Isoform_45814_9	chr14	-	3633	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	125.363145969407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCCAGATTGTTCAAAT	NA	False	NA	-33	True	ATTAAA	-17	NA	67952853	67913802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_45816_51	chr14	-	3262	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-29	-370	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	125.363145969407	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTTAAGTAGAAATACA	NA	False	NA	-22	True	AATAAA	-18	NA	67952853	67914173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_45830_135	chr14	-	3306	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	206	329	-29	-329	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATATTTGTTTGTCTT	NA	False	NA	19	True	AATACA	-22	NA	67952853	67914132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_45832_32	chr14	-	3660	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	201	-20	-34	-4	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGTCACAGGTAATCTGAG	NA	False	NA	-14	True	ATTAAA	-36	NA	67952858	67913783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_45833_9	chr14	-	3501	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	12	328	12	-328	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATTTGTTTGTCTTT	NA	False	NA	20	True	AATACA	-23	NA	67953047	67914131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_45836_45	chr14	-	3604	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	237	0	2	0	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTCCAGATTGTTCAAA	NA	False	NA	-34	True	ATTAAA	-16	NA	67952822	67913803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_45837_14	chr14	-	6759	16	Fusion	ENSMUSG00000048922.19_ENSMUSG00000093726.2	novel	3841	15	NA	NA	1	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	136.329241992399	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTCCTGTGTCTGGGC	NA	False	NA	-5	True	NA	NA	NA	67952823	67910628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_-_67911978_67911998_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_45840_11	chr14	-	6813	15	FSM	ENSMUSG00000048922.19_ENSMUSG00000093726.2	ENSMUST00000163100.8	3841	15	206	-3178	-29	0	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCCTGTGTCTGGGCCTT	NA	False	NA	-2	True	NA	NA	NA	67952853	67910625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_45843_76	chr14	-	3243	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-23	-356	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTAATTTCTTTCTT	NA	False	NA	-8	True	AATAAA	-32	NA	67953082	67914159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
Isoform_45845_22	chr14	-	3630	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-24	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTGAGTTTCATTCAT	NA	False	NA	-4	True	NA	NA	NA	67953083	67913773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
Isoform_45860_42	chr14	-	6642	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-139	3485	-129	-1	multi-exon	FALSE	canonical	3	67	junction_21	9.78869405661972	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATAGAGTGAATTTTATT	NA	False	NA	0	True	NA	NA	NA	68171020	67993068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
Isoform_45861_12	chr14	-	6768	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-140	3360	-130	124	multi-exon	TRUE	canonical	3	67	junction_21	9.78869405661972	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGAGTTAGATGGGTT	NA	False	NA	NA	False	CATAAA	-21	NA	68171021	67992943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
Isoform_45863_4	chr14	-	6713	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-209	3484	-199	0	multi-exon	FALSE	canonical	3	67	junction_21	9.78869405661972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAGTGAATTTTATTG	NA	False	NA	1	True	NA	NA	NA	68171090	67993067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
Isoform_45869_3	chr14	-	2316	4	FSM	ENSMUSG00000034248.8	ENSMUST00000184914.2	2212	4	-103	-1	42	1	multi-exon	FALSE	canonical	3	36	junction_2	77.0512095225564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTCTCTTTTC	584	False	NA	-7	True	NA	NA	NA	69522519	69481623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69482804_69485029_69485087_69486331_69487072_69522180
Isoform_45870_3	chr14	-	2123	4	FSM	ENSMUSG00000034248.8	ENSMUST00000184914.2	2212	4	-108	197	37	-197	multi-exon	FALSE	canonical	3	36	junction_2	77.0512095225564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCTGTTTTGTTTTTTT	579	False	NA	NA	False	TATAAA	-22	NA	69522524	69481821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69482804_69485029_69485087_69486331_69487072_69522180
Isoform_45871_10	chr14	-	1802	4	FSM	ENSMUSG00000034248.8	ENSMUST00000037064.5	4174	4	42	2330	42	-2	multi-exon	FALSE	canonical	3	26	junction_2	79.79974937304	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTTGAATTTCTCTT	584	False	NA	-10	True	NA	NA	NA	69522519	69481626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69482804_69485029_69485087_69486842_69487072_69522180
Isoform_45872_9	chr14	-	4127	4	FSM	ENSMUSG00000034248.8	ENSMUST00000037064.5	4174	4	42	5	42	-2	multi-exon	FALSE	canonical	3	26	junction_2	79.79974937304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCATTGTGGGGTCTT	584	False	NA	-9	True	AATAAA	-11	NA	69522519	69479301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69482804_69485029_69485087_69486842_69487072_69522180
Isoform_45875_12	chr14	-	3568	3	FSM	ENSMUSG00000034248.8	ENSMUST00000184497.2	5927	3	42	2317	42	8	multi-exon	FALSE	canonical	3	50	junction_2	78	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTCTTTTCATGGGGA	584	False	NA	0	True	NA	NA	NA	69522519	69481616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69482804_69485029_69487072_69522180
Isoform_45878_47	chr14	-	2004	7	FSM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	-42	-4	18	3	multi-exon	FALSE	canonical	3	174	junction_3	17.7333646616265	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	-3	True	AATAAA	-18	NA	69944984	69934752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502
Isoform_45880_52	chr14	-	1703	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	25	-2	-6	2	multi-exon	FALSE	canonical	3	88	junction_7	41.9007573844168	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGCGTCCAAGTGCG	NA	False	NA	-4	True	AATAAA	-17	NA	69945008	69934753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
Isoform_45881_123	chr14	-	1679	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	49	-2	18	2	multi-exon	FALSE	canonical	3	88	junction_7	41.9007573844168	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGCGTCCAAGTGCG	NA	False	NA	-4	True	AATAAA	-17	NA	69944984	69934753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
Isoform_45883_3	chr14	-	2962	6	NIC	ENSMUSG00000034194.19	novel	1958	7	NA	NA	-20	2	intron_retention	FALSE	canonical	3	174	junction_2	18.8997354478839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGCGTCCAAGTGCG	NA	False	NA	-4	True	AATAAA	-17	NA	69944962	69934753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502
Isoform_45884_13	chr14	-	2722	7	NIC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	-12	3	intron_retention	FALSE	canonical	3	88	junction_6	45.1651291251214	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	-3	True	AATAAA	-18	NA	69945045	69934752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
Isoform_45886_1263	chr14	-	2656	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-7	0	0	0	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69969990	69954448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
Isoform_45887_92	chr14	-	2714	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-65	0	-58	0	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69970048	69954448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
Isoform_45893_21	chr14	-	2905	9	NIC	ENSMUSG00000034190.10	novel	2649	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	245	junction_6	15.4495145554804	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69969989	69954448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
Isoform_45899_23	chr14	-	3147	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	-30	2205	-30	-2205	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTTGTCTGTATTGG	NA	False	NA	NA	False	AATAGA	-27	NA	70043115	70024643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
Isoform_45902_3	chr14	-	4936	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	391	-5	-20	5	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTACTGTTTTATAT	NA	False	NA	1	True	AATACA	-24	NA	70042694	70022433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
Isoform_45907_557	chr14	-	3616	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	101	8	101	-8	multi-exon	TRUE	canonical	0	0	junction_8	38.4373191052654	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAACCAAGTGTGAGT	NA	False	NA	36	True	AATAAA	-10	NA	70391159	70375624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
Isoform_45908_53	chr14	-	3743	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	-26	8	-26	-8	multi-exon	FALSE	canonical	0	0	junction_8	38.4373191052654	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAACCAAGTGTGAGT	NA	False	NA	36	True	AATAAA	-10	NA	70391286	70375624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
Isoform_45913_6	chr14	-	1966	7	FSM	ENSMUSG00000044551.14	ENSMUST00000153871.2	1983	7	16	1	16	-1	multi-exon	FALSE	canonical	2	3	junction_1	2.91070819942883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGACTGTTAAATGAC	NA	False	NA	NA	False	NA	NA	NA	70396935	70391854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70392726_70393298_70393403_70393609_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
Isoform_45914_7	chr14	-	1947	7	FSM	ENSMUSG00000044551.14	ENSMUST00000058240.14	1986	7	38	1	38	-1	multi-exon	FALSE	canonical	2	3	junction_1	2.76887462097269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGACTGTTAAATGAC	NA	False	NA	NA	False	NA	NA	NA	70396913	70391854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70392726_70393298_70393406_70393609_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
Isoform_45915_18	chr14	-	1923	10	ISM	ENSMUSG00000022091.7	ENSMUST00000227259.2	2481	21	12380	-464	12380	0	3prime_fragment	FALSE	canonical	3	14	junction_5	4.24554959434284	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCTGCTTCATTA	NA	False	NA	NA	False	AATAAA	-16	NA	70429692	70417916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429534
Isoform_45916_4	chr14	-	2063	10	ISM	ENSMUSG00000022091.7	ENSMUST00000227259.2	2481	21	12239	-463	12239	-1	3prime_fragment	FALSE	canonical	3	14	junction_5	4.24554959434284	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTGTCTGCTTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	70429833	70417917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429534
Isoform_45918_3	chr14	-	1891	10	NNC	ENSMUSG00000022091.7	novel	3061	21	NA	NA	12658	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	7.37027731190089	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTGTCTGCTTCATT	-22	False	NA	NA	False	AATAAA	-15	NA	70429414	70417917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429287
Isoform_45919_11	chr14	-	2026	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	-45	-11	-45	11	multi-exon	FALSE	canonical	2	11	junction_1	4.03827838412513	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTTTTGTTTTGTTT	9141	False	NA	NA	False	TATAAA	-36	NA	70526965	70455335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
Isoform_45920_11	chr14	-	1993	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	8	-31	8	-2	multi-exon	TRUE	canonical	2	11	junction_1	4.03827838412513	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCCCTTGTCCTAATTT	9194	False	NA	NA	False	NA	NA	NA	70526912	70455315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
Isoform_45921_4	chr14	-	2542	13	FSM	ENSMUSG00000022092.12	ENSMUST00000228265.2	2494	13	-43	-5	-22	5	multi-exon	FALSE	canonical	2	5	junction_1	4.93006648591635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGCCTGTACATTTC	9164	False	NA	NA	False	AATAAA	-22	NA	70526942	70460420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70461381_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
Isoform_45923_3	chr14	-	4210	7	NNC	ENSMUSG00000022094.16	novel	4926	10	NA	NA	-2697	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.44671154612273	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGAGTCCCAAGTGTC	NA	False	NA	1	True	AATAAA	-14	NA	70554071	70540916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_70542466_70542487_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70553886
Isoform_45924_9	chr14	-	4909	23	FSM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	7	0	7	0	multi-exon	FALSE	canonical	3	11	junction_22	14.3650747266008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTCTGAGAGAATATT	NA	False	NA	-14	True	AATAAA	-18	NA	70666536	70609925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666391
Isoform_45925_9	chr14	-	4925	23	FSM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	-11	2	-11	-2	multi-exon	FALSE	canonical	3	11	junction_22	14.3650747266008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTGTCTGAGAGAATA	NA	False	NA	-16	True	AATAAA	-16	NA	70666554	70609927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666391
Isoform_45928_52	chr14	-	4873	23	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	3	45	junction_14	9.98511288563344	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTGTCTGAGAGAATA	NA	False	NA	-16	True	AATAAA	-16	NA	70666881	70609927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
Isoform_45929_56	chr14	-	4835	23	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_14	9.98511288563344	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTCTGAGAGAATATT	NA	False	NA	-14	True	AATAAA	-18	NA	70666841	70609925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
Isoform_45930_5	chr14	-	5165	23	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-49	290	combination_of_known_junctions	FALSE	canonical	3	45	junction_14	9.98511288563344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGATTGATTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	70666881	70609635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
Isoform_45933_4	chr14	-	1296	6	ISM	ENSMUSG00000033644.6	ENSMUST00000226229.2	962	7	-15	9069	-15	6306	5prime_fragment	FALSE	canonical	3	61	junction_4	6.99714227381436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATAACTCAGAATCCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	70666847	70657651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
Isoform_45935_57	chr14	-	1955	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	120	-43	120	4	multi-exon	FALSE	canonical	3	137	junction_3	15.9910689359494	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTGGTTCTGCTCACA	2008	False	NA	-3	True	AATAAA	-21	NA	70680610	70676192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
Isoform_45936_5	chr14	-	2048	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	24	-40	24	1	multi-exon	FALSE	canonical	3	137	junction_3	15.9910689359494	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTAAGTGGTTCTGCTC	1912	False	NA	-6	True	AATAAA	-18	NA	70680706	70676195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
Isoform_45937_23	chr14	-	1938	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	95	-1	95	1	multi-exon	FALSE	canonical	3	137	junction_3	15.9910689359494	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGTCTATTTCCAAATA	1983	False	NA	-9	True	AATAAA	-18	NA	70680635	70676234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
Isoform_45940_172	chr14	-	2027	9	FSM	ENSMUSG00000000776.14	ENSMUST00000000793.13	2016	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	137	junction_3	16.2244992218558	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTAAGTGGTTCTGCT	1720	False	NA	-7	True	AATAAA	-17	NA	70680898	70676196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
Isoform_45946_9	chr14	-	3754	20	FSM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	-72	2	-26	0	multi-exon	FALSE	canonical	1	1	junction_3	1.84885979686845	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGTGCCAGATGCT	8921	False	NA	NA	False	AATAAA	-18	NA	70757700	70711999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70712690_70715292_70715544_70716984_70717199_70717593_70717722_70723586_70723713_70727459_70727641_70727986_70728148_70728790_70728917_70729515_70729712_70729844_70729991_70730218_70730336_70732152_70732256_70742121_70742238_70742771_70742897_70744892_70744999_70745438_70745618_70745895_70746014_70746189_70746355_70749020_70749135_70757308
Isoform_45949_103	chr14	-	2749	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTATTGTTTCTATCC	NA	False	NA	-4	True	ATTAAA	-18	NA	70864498	70841113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_45950_13	chr14	-	2858	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-111	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70864605	70841111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_45953_4	chr14	-	2769	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCAGTTGTCTTACCTC	NA	False	NA	47	True	NA	NA	NA	70864467	70841062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_45954_4	chr14	-	3008	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-41	171	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTAGTCTTACCTC	NA	False	NA	NA	False	NA	NA	NA	70864535	70840891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_45958_4	chr14	-	2518	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	71.7771494535236	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70866446	70841111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70866359
Isoform_45959_5	chr14	-	2561	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	29	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	70.0381820064992	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70873389	70841111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873259
Isoform_45960_11	chr14	-	2490	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	101	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	70.0381820064992	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATTGTTTCTATCCATG	NA	False	NA	-1	True	ATTAAA	-21	NA	70873317	70841110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873259
Isoform_45961_14	chr14	-	2676	14	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	73.4809881622571	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70864498	70841111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855678_70855849_70864178
Isoform_45964_15	chr14	-	2692	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.765773443168	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70864497	70841111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_45965_6	chr14	-	3182	14	NIC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	-2	0	intron_retention	FALSE	canonical	2	74	junction_2	38.011209807186	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70864496	70841112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70842295_70842407_70842989_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_45966_25	chr14	-	1552	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	89	-305	89	-1	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879605	70873643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
Isoform_45967_18	chr14	-	1663	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	-22	-305	-8	-1	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879716	70873643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
Isoform_45968_3	chr14	-	1809	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	-167	-306	-153	0	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	0	True	AATAAA	-16	NA	70879861	70873642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
Isoform_4597_30	chr10	-	3205	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	-93	2	-93	1	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGAGTTTTCTCTTA	NA	False	NA	-6	True	AATAAA	-27	NA	117628703	117586527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
Isoform_45970_10	chr14	-	1704	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	-63	-305	-49	-1	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879757	70873643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
Isoform_45974_28	chr14	-	1688	5	FSM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	0	1	0	-1	multi-exon	FALSE	canonical	3	21	junction_3	15.3195136998535	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879708	70873643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_70874464_70875906_70876014_70876241_70876420_70878971_70879009_70879162
Isoform_45976_3	chr14	-	4132	4	NIC	ENSMUSG00000022101.7	novel	1689	5	NA	NA	91	-4	intron_retention	FALSE	canonical	3	49	junction_3	6.37704215656966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCGGGTCCGCTGAAGA	NA	False	NA	-4	True	AATAAA	-12	NA	70879603	70873646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70874464_70875906_70876014_70876241_70879009_70879162
Isoform_45977_3	chr14	-	4289	4	NIC	ENSMUSG00000022101.7	novel	1689	5	NA	NA	-49	-1	intron_retention	FALSE	canonical	3	49	junction_3	6.37704215656966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879757	70873643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_70874464_70875906_70876014_70876241_70879009_70879162
Isoform_45978_5	chr14	-	1103	4	ISM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	-63	1739	-49	-1739	5prime_fragment	FALSE	canonical	3	35	junction_2	11.4309521329882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATATGAGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	70879757	70875687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_70876014_70876241_70876387_70878971_70879009_70879162
Isoform_4598_1864	chr10	-	3108	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	5	1	-2	-1	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	1864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGAGTTTTCTCTTAT	NA	False	NA	-5	True	AATAAA	-28	NA	117628605	117586526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
Isoform_45980_4	chr14	-	1136	4	ISM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	-49	2045	-49	-1739	5prime_fragment	FALSE	canonical	3	21	junction_2	17.4610678049451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATATGAGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	70879757	70875687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_70876014_70876241_70876420_70878971_70879009_70879162
Isoform_45981_6	chr14	-	986	4	ISM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	103	2043	89	-1737	5prime_fragment	FALSE	canonical	3	21	junction_2	17.4610678049451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATGAGTGTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	70879605	70875685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_70876014_70876241_70876420_70878971_70879009_70879162
Isoform_45986_9	chr14	-	4824	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	2	281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	88.8509332544799	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTCAGCAGTCACG	NA	False	NA	-13	True	AATAAA	-19	NA	71004066	70901976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920297_70921096_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
Isoform_45998_30	chr14	-	5698	24	FSM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	-17	-1581	-17	-3	multi-exon	FALSE	canonical	3	32	junction_23	34.1903931941048	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTTTTTTGTATTTA	7128	False	NA	-4	True	AATAAA	-21	NA	72840419	72775388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
Isoform_46_243	ERCC-00022	+	733	1	FSM	ERCC-00022A	DQ855004	735	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00022_+_0_700
Isoform_4600_30	chr10	-	3221	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	10	-117	3	117	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAGGTAATTTCGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	117628600	117586408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
Isoform_46000_25	chr14	-	5765	24	FSM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	-83	-1582	-83	-2	multi-exon	FALSE	canonical	3	32	junction_23	34.1903931941048	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	7062	False	NA	-3	True	AATAAA	-22	NA	72840485	72775387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
Isoform_46001_8	chr14	-	5813	24	FSM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	-133	-1580	-133	-4	multi-exon	FALSE	canonical	3	32	junction_23	34.1903931941048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATATGTTTTTTGTATTT	7012	False	NA	-5	True	AATAAA	-20	NA	72840535	72775389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
Isoform_46002_143	chr14	-	6145	26	FSM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	-5	3	-5	-3	multi-exon	FALSE	canonical	3	104	junction_25	24.1979833870511	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTTTTTTGTATTTA	NA	False	NA	-4	True	AATAAA	-21	NA	72947448	72775388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
Isoform_46006_31	chr14	-	5998	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-697	-2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_25	35.8196817406297	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	-3	True	AATAAA	-22	NA	72948140	72775387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947997
Isoform_46008_9	chr14	-	6015	25	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-13	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_24	38.9581105162969	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTTTTTTGTATTTA	NA	False	NA	-4	True	AATAAA	-21	NA	72947456	72775388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72947157
Isoform_46013_16	chr14	-	4638	27	FSM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	15	3	15	-3	multi-exon	FALSE	canonical	3	21	junction_3	9.67129896490844	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTGTGATATGATCT	NA	False	NA	-16	True	AATAAA	-17	NA	73563247	73432944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
Isoform_46014_14	chr14	-	4830	27	FSM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	-175	1	-175	-1	multi-exon	FALSE	canonical	3	21	junction_3	9.67129896490844	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGTGATATGATCTCT	NA	False	NA	-14	True	AATAAA	-19	NA	73563437	73432942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
Isoform_46017_3	chr14	-	2541	17	ISM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	-166	66510	-166	388	5prime_fragment	FALSE	canonical	3	27	junction_5	7.88194138521722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTTATCTGTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	73563428	73499451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
Isoform_46018_237	chr14	-	1771	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	18	7	18	-7	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGATTTCTTGTGGATG	NA	False	NA	NA	False	AATAAA	-19	NA	73622711	73599672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
Isoform_46026_35	chr14	-	1802	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	-15	9	-15	-9	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAGATTTCTTGTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	73622744	73599674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
Isoform_46033_46	chr14	-	3172	3	ISM	ENSMUSG00000033405.5	ENSMUST00000043813.3	3579	5	23005	1	-26	-1	3prime_fragment	FALSE	canonical	2	19	junction_1	0.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCTCAGAGACTTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	73762677	73756317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_73759115_73760737_73760935_73762499
Isoform_46034_29	chr14	-	3288	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	-9	1415	1	37	multi-exon	FALSE	canonical	3	34	junction_4	23.7891243570067	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTTTTTTTCTGGAT	570	False	NA	NA	False	ATTAAA	-18	NA	75185315	74993529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
Isoform_46036_19	chr14	-	4702	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	-9	1	1	-1	multi-exon	FALSE	canonical	3	34	junction_4	23.7891243570067	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTTGGATTGATTGAC	570	False	NA	-2	True	ATTAAA	-19	NA	75185315	74992115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
Isoform_46038_86	chr14	-	3208	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	1	-84	1	38	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTTTTTTTCTGGATT	570	False	NA	NA	False	ATTAAA	-19	NA	75185315	74993528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
Isoform_46039_62	chr14	-	4622	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	1	-1498	1	0	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGGATTGATTGACT	570	False	NA	-1	True	ATTAAA	-20	NA	75185315	74992114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
Isoform_46044_4	chr14	-	4162	20	NIC	ENSMUSG00000068015.9	novel	2678	10	NA	NA	-19	-17	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	30.6701692166573	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAAGCTTTTTATTTTTT	550	False	NA	NA	False	AATAAA	-17	NA	75185335	75000779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_75002688_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
Isoform_46047_261	chr14	-	4277	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	10	-19	10	-1	multi-exon	FALSE	canonical	3	97	junction_8	10.1293289898751	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	AATAAA	-37	NA	75991988	75939790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
Isoform_46050_37	chr14	-	4254	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	22.2812599611096	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	AATAAA	-37	NA	75991996	75939790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
Isoform_46055_37	chr14	-	3558	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	32	-2	0	2	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGCTTACAGTCATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	76024445	75997554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
Isoform_46058_15	chr14	-	3584	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	4	0	4	0	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGCTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	76024473	75997556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
Isoform_46061_298	chr14	-	1518	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-47	-4	-47	4	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCAACTGTTATCACTG	NA	False	NA	-13	True	AATAAA	-23	NA	76248352	76134372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
Isoform_46074_112	chr14	-	5422	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-33	0	-33	0	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTGGAATCTTCCTTT	NA	False	NA	-9	True	AATAAA	-17	NA	76348233	76323675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
Isoform_46077_29	chr14	-	1234	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-64	4219	-64	-4219	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTGCACAAATACGTC	NA	False	NA	-16	True	AATATA	-16	NA	76348264	76327894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
Isoform_46084_60	chr14	-	635	2	ISM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	16752	-3	16386	1	3prime_fragment	FALSE	canonical	3	106	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCATGTGCGAGTTACCG	NA	False	NA	-1	True	AATAAA	-19	NA	76777546	76770252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_76770687_76777345
Isoform_46085_3	chr14	-	897	4	ISM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	184	0	-2	0	3prime_fragment	FALSE	canonical	3	14	junction_2	40.4749579644281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACCATGTGCGAGTTA	NA	False	NA	-4	True	AATAAA	-16	NA	76794114	76770255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_76770687_76777345_76777495_76787421_76787495_76793870
Isoform_46086_4	chr14	-	925	5	FSM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	-57	-3	-26	1	multi-exon	FALSE	canonical	3	14	junction_2	35.7587401903367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCATGTGCGAGTTACCG	NA	False	NA	-1	True	AATAAA	-19	NA	76794355	76770252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_76770687_76777345_76777495_76787421_76787495_76793870_76793989_76794204
Isoform_46087_3	chr14	-	851	3	NIC	ENSMUSG00000052584.11	novel	865	5	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	50.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCATGTGCGAGTTACCG	NA	False	NA	-1	True	AATAAA	-19	NA	76794138	76770252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_76770687_76777345_76777495_76793870
Isoform_46088_3	chr14	-	757	3	FSM	ENSMUSG00000052584.11	ENSMUST00000064517.9	748	3	-8	-1	-8	1	multi-exon	FALSE	canonical	3	10	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCATGTGCGAGTTACCG	NA	False	NA	-1	True	AATAAA	-19	NA	76794120	76770252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_76770687_76787421_76787495_76793870
Isoform_46089_3	chr14	-	744	4	NIC	ENSMUSG00000052584.11	novel	865	5	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	9.8770215933527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACCATGTGCGAGTTAC	NA	False	NA	-3	True	AATAAA	-17	NA	76794325	76770254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_76770687_76787421_76787495_76793870_76793989_76794204
Isoform_46090_45	chr14	-	2421	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	21	2	21	-2	multi-exon	FALSE	canonical	3	38	junction_3	13.9737362978714	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	-1	True	NA	NA	NA	77274060	77261641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
Isoform_46091_33	chr14	-	2449	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	-7	2	-7	-2	multi-exon	FALSE	canonical	3	38	junction_3	13.9737362978714	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	-1	True	NA	NA	NA	77274088	77261641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
Isoform_46092_9	chr14	-	2703	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	-261	2	2	-2	multi-exon	FALSE	canonical	3	38	junction_3	13.9737362978714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	-1	True	NA	NA	NA	77274342	77261641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
Isoform_46093_5	chr14	-	2539	7	NIC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	20.3258182833776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTATCCATTCCTT	NA	False	NA	0	True	NA	NA	NA	77274356	77261640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273936
Isoform_46095_24	chr14	-	2262	7	NIC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	20.3258182833776	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTATCCATTCCTTT	NA	False	NA	1	True	NA	NA	NA	77274078	77261639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273936
Isoform_46097_355	chr14	-	628	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	0	5565	0	-31	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCTGGCAGGGACT	NA	False	NA	-38	True	AATAAA	-18	NA	78112366	78063685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
Isoform_46099_14	chr14	-	883	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	-221	5531	-22	3	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGCTTTTCCACATCA	NA	False	NA	-4	True	NA	NA	NA	78112587	78063651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
Isoform_4610_315	chr10	-	2077	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	53	594	53	-594	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGTGTTATTTTACACA	8658	False	NA	-15	True	AATAAA	-24	NA	117681887	117650369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
Isoform_46102_3	chr14	-	9414	12	FSM	ENSMUSG00000022016.18	ENSMUST00000123853.9	9364	12	-49	-1	-49	1	multi-exon	FALSE	canonical	3	18	junction_4	17.0725239604508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTTTTCCTTCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	78774297	78729684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
Isoform_46103_4	chr14	-	6661	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-30	-130	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	24.8313318475331	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTTGTCTTTTTTATT	NA	False	NA	-2	True	AATAAA	-22	NA	78774278	78732394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753786_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
Isoform_46104_17	chr14	-	6687	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-30	-131	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	12.2271882389781	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTGTCTTTTTTAT	NA	False	NA	-3	True	AATAAA	-21	NA	78774278	78732395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
Isoform_46105_11	chr14	-	9398	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	12.2271882389781	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATGGTTTTCCTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	78774281	78729687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
Isoform_46106_3	chr14	-	6651	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-18	-131	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	22.3366429848962	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTGTCTTTTTTAT	NA	False	NA	-3	True	AATAAA	-21	NA	78774266	78732395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319_78751761_78752246_78752512_78753786_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
Isoform_4611_118	chr10	-	2673	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	53	-2	53	2	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTCGTACTCGTTATG	8658	False	NA	-8	True	ATTAAA	-14	NA	117681887	117649773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
Isoform_46111_133	chr14	-	909	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	15	-6	15	6	multi-exon	FALSE	canonical	3	129	junction_2	11.7046999107196	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAAAGCTGCCTTATTT	NA	False	NA	-5	True	AATAAA	-20	NA	79539070	79526189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
Isoform_46114_8	chr14	-	4073	21	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	-33	-304	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	55.2484388919723	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTGTTTATATCTTT	NA	False	NA	-19	True	AATAAA	-14	NA	79628165	79571947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
Isoform_46115_7	chr14	-	3000	21	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	4	6	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	55.2484388919723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	79628214	79573069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
Isoform_46116_70	chr14	-	3954	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	31	9238	31	-303	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGTTTATATCTTTT	NA	False	NA	-18	True	AATAAA	-15	NA	79628187	79571946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
Isoform_46118_107	chr14	-	2861	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	2	10360	2	7	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTGTTTGTTTT	NA	False	NA	-3	True	AATAAA	-18	NA	79628216	79573068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
Isoform_4612_180	chr10	-	2062	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	1	661	1	-661	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTGTTTTGTGTAAT	8606	False	NA	-9	True	AATAAA	-43	NA	117681939	117650436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
Isoform_46126_85	chr14	-	2196	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	509	999	-49	14	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGGGTCTCTTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	79718451	79698375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
Isoform_46127_109	chr14	-	1417	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	475	1812	-83	-97	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATTTTTGTTCCTTA	NA	False	NA	-6	True	AATAAA	-15	NA	79718485	79699188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
Isoform_46129_31	chr14	-	2245	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	460	999	-98	14	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGGGTCTCTTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	79718500	79698375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
Isoform_4613_455	chr10	-	1997	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	53	674	53	-674	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTACTTGCCACTGAATG	8658	False	NA	12	True	AATAAA	-30	NA	117681887	117650449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
Isoform_46135_18	chr14	-	3195	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	509	0	-49	0	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGTGTTTGTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	79718451	79697376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
Isoform_46136_7	chr14	-	3240	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	460	4	-98	-4	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTAAATCTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	79718500	79697380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
Isoform_46137_20	chr14	-	2710	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	-9	1003	-9	10	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAATATCGGGGTCTCT	NA	False	NA	NA	False	ATTAAA	-8	NA	79718969	79698379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
Isoform_46145_6	chr14	-	1738	4	ISM	ENSMUSG00000022021.15	ENSMUST00000168889.3	4582	28	330521	2	-20814	-2	3prime_fragment	FALSE	canonical	3	153	junction_1	22.5141930543577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGACGTATGTCTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	87048139	86892804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771
Isoform_4615_124	chr10	-	2124	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	1	599	1	-599	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAATAGGTGTTATTTT	8606	False	NA	-20	True	AATAAA	-19	NA	117681939	117650374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
Isoform_46154_252	chr14	-	4552	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	30	0	-24	0	multi-exon	FALSE	non_canonical	0	0	junction_5	42.6759570646689	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGTATGTCTCTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	87378630	86892802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
Isoform_46158_7	chr14	-	4520	27	NIC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	27	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	54.2548773473531	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGACGTATGTCTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	87378633	86892804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87378433
Isoform_46177_804	chr14	-	2226	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	11	3	11	-3	multi-exon	FALSE	canonical	3	792	junction_1	24.5	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTCCTTTTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	99283545	99271982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_99273947_99277950_99278097_99283429
Isoform_46179_33	chr14	-	2284	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-49	5	-35	-5	multi-exon	FALSE	canonical	3	792	junction_1	24.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGCCTTGTCCTTTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	99283605	99271984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_99273947_99277950_99278097_99283429
Isoform_46187_11	chr14	-	2756	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-23	-493	-9	493	multi-exon	FALSE	canonical	3	792	junction_1	24.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGTTCTAGTGAGTTA	NA	False	NA	NA	False	AATATA	-13	NA	99283579	99271486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_99273947_99277950_99278097_99283429
Isoform_46189_10	chr14	-	2207	3	FSM	ENSMUSG00000033186.10	ENSMUST00000227948.2	952	3	-16	-1239	11	-3	multi-exon	FALSE	canonical	3	18	junction_2	387	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTCCTTTTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	99283545	99271982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_99273947_99277950_99278097_99283448
Isoform_46197_29	chr14	-	3133	22	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	6	-9	combination_of_known_junctions	FALSE	canonical	3	37	junction_20	122.265648850725	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTGCATTTTTATTG	2539	False	NA	-20	True	AATACA	-15	NA	99337194	99314714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
Isoform_46198_619	chr14	-	3065	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	12	2073	6	-9	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTGCATTTTTATTG	2539	False	NA	-20	True	AATACA	-15	NA	99337194	99314714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
Isoform_46203_28	chr14	-	5112	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	23	15	-7	-15	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAACCAGC	2550	False	NA	NA	False	NA	NA	NA	99337183	99312656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
Isoform_46209_12	chr14	-	4677	20	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	1	-9	intron_retention	FALSE	canonical	3	37	junction_18	126.917907029125	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTGCATTTTTATTG	2534	False	NA	-20	True	AATACA	-15	NA	99337199	99314714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
Isoform_46210_15	chr14	-	4571	19	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	15	-9	intron_retention	FALSE	canonical	3	393	junction_11	28.7967011999639	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTGCATTTTTATTG	2572	False	NA	-20	True	AATACA	-15	NA	99337161	99314714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
Isoform_46212_12	chr14	-	1596	8	ISM	ENSMUSG00000033166.12	ENSMUST00000228643.2	2971	20	-27	12085	-3	-4679	5prime_fragment	FALSE	canonical	3	415	junction_7	16.9597362320652	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTTGCATTGAAGGTT	2530	False	NA	NA	False	AATAAA	-31	NA	99337203	99326790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
Isoform_46216_35	chr14	-	6287	19	FSM	ENSMUSG00000033083.17	ENSMUST00000161991.8	6483	19	189	7	-12	1	multi-exon	FALSE	canonical	3	15	junction_15	4.49553962758753	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGAGCTTTTTTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	101846280	101679802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
Isoform_46217_4	chr14	-	6522	19	FSM	ENSMUSG00000033083.17	ENSMUST00000161991.8	6483	19	-46	7	-46	1	multi-exon	FALSE	canonical	3	15	junction_15	4.49553962758753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGAGCTTTTTTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	101846515	101679802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
Isoform_46219_4	chr14	-	6589	19	FSM	ENSMUSG00000033083.17	ENSMUST00000161991.8	6483	19	-105	-1	53	1	multi-exon	FALSE	canonical	3	15	junction_15	4.49553962758753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGCTGTTATTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	101846574	101679794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
Isoform_46222_3	chr14	-	2959	6	NNC	ENSMUSG00000033083.17	novel	674	2	NA	NA	-14	11537	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.0915806492343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAGAAGCATTTTTAAT	NA	False	NA	NA	False	AATAAA	-13	NA	101846282	101730605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_101730773_101730804_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
Isoform_46224_55	chr14	-	849	4	FSM	ENSMUSG00000075486.11	ENSMUST00000100339.9	1090	4	241	0	3	0	multi-exon	FALSE	canonical	3	419	junction_3	9.8770215933527	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGACGTGTCTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	101877881	101871201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_101871829_101874389_101874543_101877723_101877736_101877824
Isoform_46225_16	chr14	-	1634	4	FSM	ENSMUSG00000075486.11	ENSMUST00000100339.9	1090	4	241	-785	3	0	multi-exon	FALSE	canonical	3	419	junction_3	9.8770215933527	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGTGGTGAGCTGACA	NA	False	NA	0	True	NA	NA	NA	101877881	101870416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_101871829_101874389_101874543_101877723_101877736_101877824
Isoform_46226_8	chr14	-	522	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	7	-10	-2	10	multi-exon	FALSE	canonical	3	50	junction_2	193.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAAAAGAGAATTTCAC	NA	False	NA	-13	True	AATAAA	-3	NA	101877886	101871521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_101871829_101874389_101874543_101877824
Isoform_46227_5	chr14	-	851	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	-2	-330	-2	0	multi-exon	FALSE	canonical	3	50	junction_2	193.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGACGTGTCTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	101877895	101871201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_101871829_101874389_101874543_101877824
Isoform_46228_3	chr14	-	1638	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	-4	-1115	-4	0	multi-exon	FALSE	canonical	3	50	junction_2	193.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGTGGTGAGCTGACA	NA	False	NA	0	True	NA	NA	NA	101877897	101870416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_101871829_101874389_101874543_101877824
Isoform_46230_211	chr14	-	3355	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-4	1	-4	-1	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTTGTATTTTTATAA	9918	False	NA	-5	True	AATAAA	-12	NA	103336439	103318470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
Isoform_46234_107	chr14	-	3492	5	FSM	ENSMUSG00000022124.16	ENSMUST00000022720.15	4309	5	22	795	22	0	multi-exon	FALSE	canonical	3	60	junction_4	52.2894587847302	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9835	False	NA	-4	True	AATAAA	-13	NA	103336968	103318469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336597
Isoform_46238_18	chr14	-	3327	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	68.4945253286713	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTTGTATTTTTATA	9804	False	NA	-6	True	AATAAA	-11	NA	103336999	103318471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336791
Isoform_46239_70	chr14	-	3211	5	FSM	ENSMUSG00000022124.16	ENSMUST00000132004.8	2534	5	-28	-649	-4	-1	multi-exon	FALSE	canonical	3	39	junction_3	61.6050931336038	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTTGTATTTTTATAA	9918	False	NA	-5	True	AATAAA	-12	NA	103336439	103318470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336204
Isoform_46240_29	chr14	-	3353	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	68.9759922001851	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTTGTATTTTTATAA	9829	False	NA	-5	True	AATAAA	-12	NA	103336974	103318470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336597
Isoform_46241_7	chr14	-	3379	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	68.9759922001851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTTGTATTTTTATAA	9803	False	NA	-5	True	AATAAA	-12	NA	103337000	103318470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336597
Isoform_46244_5	chr14	-	5113	28	NNC	ENSMUSG00000033004.17	novel	14620	83	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	8.23872218307406	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGTGTAAAGTATTT	NA	False	NA	NA	False	AATAAA	-34	NA	103392721	103350848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376164_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559
Isoform_46245_25	chr14	-	630	2	ISM	ENSMUSG00000033004.17	ENSMUST00000162537.2	3495	3	6	12014	6	-12014	5prime_fragment	FALSE	canonical	3	11	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAGAAAAGCAAATCAAA	NA	False	NA	NA	False	AAGAAA	-28	NA	103584244	103561144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_103561182_103583651
Isoform_46246_10	chr14	-	1451	2	NIC	ENSMUSG00000048349.10	novel	4445	3	NA	NA	-34	456	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATGATCTGGGTGCAT	NA	False	NA	-8	True	AATAAA	-21	NA	104705469	104700952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_104701981_104705046
Isoform_46247_6	chr14	-	2636	3	NNC	ENSMUSG00000048349.10	novel	4445	3	NA	NA	-15	-610	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTTGCAGGGTTTCCTA	NA	False	NA	NA	False	AATAAA	-17	NA	104705450	104699721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_104700446_104700472_104701981_104705046
Isoform_46248_49	chr14	-	3434	7	NNC	ENSMUSG00000022120.5	novel	3420	6	NA	NA	-34	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	34.5333976833377	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGCTTTTGATGTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	104760115	104714974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_104715562_104715591_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
Isoform_46249_128	chr14	-	3415	7	NNC	ENSMUSG00000022120.5	novel	3420	6	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	34.5333976833377	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTTGATGTCATCAT	NA	False	NA	-1	True	AATAAA	-18	NA	104760085	104714971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_104715561_104715582_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
Isoform_46250_6	chr14	-	3285	6	NNC	ENSMUSG00000022120.5	novel	3420	6	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.5117266973404	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTTGATGTCATCAT	NA	False	NA	-1	True	AATAAA	-18	NA	104760089	104714971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_104715561_104715580_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104759976
Isoform_46254_4	chr14	-	4950	23	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	3633	22	NA	NA	23	1	multi-exon	FALSE	canonical	3	71	junction_2	45.2615904520371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGGCTTTAATTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	105414736	105346824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
Isoform_46255_3	chr14	-	7577	23	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	3633	22	NA	NA	-25	0	multi-exon	FALSE	canonical	3	71	junction_2	45.2615904520371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTTAATGTTTTAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	105414725	105344186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
Isoform_46256_4	chr14	-	6377	21	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	4212	21	NA	NA	-1	-4	multi-exon	FALSE	canonical	3	18	junction_1	56.3227085641307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTTAATGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	105414764	105344190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
Isoform_46257_11	chr14	-	6377	21	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	4212	21	NA	NA	0	-8	multi-exon	FALSE	canonical	3	18	junction_1	48.0837550530322	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAACAGTTGTTAATG	NA	False	NA	NA	False	AATAAA	-9	NA	105414759	105344194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
Isoform_4626_82	chr10	-	2408	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	-16	3737	-16	1398	multi-exon	FALSE	canonical	3	29	junction_2	3.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTGTTTTTGTTTTTG	NA	False	NA	0	True	TATAAA	-37	NA	118705070	118695244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_118697059_118704054_118704204_118704625
Isoform_46261_5	chr14	-	4539	22	FSM	ENSMUSG00000091509.8_ENSMUSG00000022119.16	ENSMUST00000022715.14	3633	22	23	-929	19	831	multi-exon	FALSE	canonical	3	64	junction_9	46.4492994023159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTGTTTGGTAAGT	NA	False	NA	-10	True	AATAAA	-27	NA	105414740	105351569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
Isoform_46264_8	chr14	-	4556	21	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	3634	21	NA	NA	0	910	multi-exon	FALSE	canonical	3	56	junction_9	41.0393408816467	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTGTGATTTTTTTTT	NA	False	NA	-4	True	TATAAA	-19	NA	105414759	105351490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
Isoform_46276_85	chr14	-	2389	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	-304	2	-304	-2	multi-exon	FALSE	canonical	3	119	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGCTTGTTTTGTCT	NA	False	NA	-6	True	TATAAA	-28	NA	106134557	106129382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_106131236_106134021
Isoform_46278_137	chr14	-	1683	12	FSM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	1	-2	1	0	multi-exon	FALSE	canonical	3	141	junction_8	15.4084875183551	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTCTTTTTATTTTG	251	False	NA	-2	True	ATTAAA	-22	NA	118370158	118349885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
Isoform_4628_15	chr10	-	6114	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	15	0	15	0	multi-exon	FALSE	canonical	3	29	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTCACCCCTTTTTCTA	NA	False	NA	-7	True	AATAAA	-19	NA	118705039	118691507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_118697059_118704054_118704204_118704625
Isoform_46280_3	chr14	-	1841	12	NNC	ENSMUSG00000022130.11	novel	1682	12	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.416189083445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTTTATTTTGTTGT	251	False	NA	2	True	ATTAAA	-26	NA	118370158	118349881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354227_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
Isoform_46301_62	chr14	-	5857	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-222	80	-208	-80	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTATTTCATTTCTAT	NA	False	NA	-6	True	ATTAAA	-17	NA	118943839	118720183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_46302_32	chr14	-	5941	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-306	80	-292	-80	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTATTTCATTTCTAT	NA	False	NA	-6	True	ATTAAA	-17	NA	118943923	118720183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_46308_26	chr14	-	5991	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-275	-1	-261	1	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAGATCTGTTTGTTCG	NA	False	NA	-7	True	AATAAA	-19	NA	118943892	118720102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_46310_28	chr14	-	5689	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	27	-1	27	1	multi-exon	TRUE	canonical	3	201	junction_24	29.291276668812	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAGATCTGTTTGTTCG	NA	False	NA	-7	True	AATAAA	-19	NA	118943590	118720102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_46319_16	chr14	-	3279	24	ISM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	27	45067	27	-1	5prime_fragment	FALSE	canonical	3	201	junction_17	22.6862382608316	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGTCTCATGTATGC	NA	False	NA	NA	False	AATAAA	-14	NA	118943590	118765170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_46320_8	chr14	-	3550	24	ISM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-243	45066	-229	0	5prime_fragment	FALSE	canonical	3	201	junction_17	22.6862382608316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTCATGTATGCT	NA	False	NA	NA	False	AATAAA	-15	NA	118943860	118765169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_46322_3	chr14	-	4353	23	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	11.4989219760624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTGCGACTGTGGCTG	NA	False	NA	-9	True	AGTAAA	-11	NA	119162880	119113672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146981_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
Isoform_46323_10	chr14	-	4362	23	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_20	9.99721035469561	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGACTGTGGCTGCTTA	NA	False	NA	-5	True	AGTAAA	-15	NA	119162882	119113668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
Isoform_46325_5	chr14	-	3464	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	-83	698	-10	-576	multi-exon	FALSE	canonical	3	20	junction_20	6.55588223176215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTCTAGTGTTAAATG	NA	False	NA	NA	False	CATAAA	-20	NA	119162882	119114367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
Isoform_46326_3	chr14	-	4164	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	-83	-2	-10	2	multi-exon	FALSE	canonical	3	20	junction_20	6.55588223176215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGACTGTGGCTGCTTAT	NA	False	NA	-4	True	AGTAAA	-16	NA	119162882	119113667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
Isoform_46329_10	chr14	-	4060	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	24	-5	24	5	multi-exon	TRUE	canonical	3	20	junction_20	6.55588223176215	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGTGGCTGCTTATTAA	NA	False	NA	-1	True	AGTAAA	-19	NA	119162775	119113664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
Isoform_46330_3	chr14	-	3877	22	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-41	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	10.2647493571484	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGTGGCTGCTTATT	NA	False	NA	-3	True	AGTAAA	-17	NA	119162913	119113666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162871
Isoform_46333_4	chr14	-	5299	39	FSM	ENSMUSG00000042104.19	ENSMUST00000156203.8	6456	39	-2	1159	-2	-5	multi-exon	TRUE	canonical	0	0	junction_5	1.51355829942615	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACTCAAATACTCTATA	NA	False	NA	NA	False	AATAAA	-22	NA	119336844	119223609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_119224326_119232357_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
Isoform_46340_468	chr14	-	2579	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	98	-1	-35	1	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCATACTATTCT	7401	False	NA	-10	True	AATAAA	-13	NA	121616648	121523753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
Isoform_46341_417	chr14	-	4746	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	85	-2155	-48	2155	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTCTCGTGTTGTGG	7388	False	NA	-9	True	AATAAA	-16	NA	121616661	121521599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
Isoform_46346_45	chr14	-	2631	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	47	-2	47	2	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGCATACTATTCTT	7350	False	NA	-9	True	AATAAA	-14	NA	121616699	121523752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
Isoform_46347_32	chr14	-	4786	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	45	-2155	45	2155	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTCTCGTGTTGTGG	7348	False	NA	-9	True	AATAAA	-16	NA	121616701	121521599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
Isoform_46354_35	chr14	-	3331	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-210	0	-210	0	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGTGTTTGTGTGT	2928	False	NA	-6	True	AATAAA	-12	NA	121742874	121697032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
Isoform_46355_38	chr14	-	3112	24	NNC	ENSMUSG00000025557.11	novel	3121	23	NA	NA	-4	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.83031844247831	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTGTGTCTTTGGG	3134	False	NA	1	True	AATAAA	-19	NA	121742668	121697025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_121697764_121697783_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
Isoform_46356_45	chr14	-	3176	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-51	-4	-51	4	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTTTGTGTGTCTTT	3087	False	NA	-2	True	AATAAA	-16	NA	121742715	121697028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
Isoform_46357_4	chr14	-	3399	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-279	1	-279	-1	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATATGTGTTTGTGTG	2859	False	NA	-7	True	AATAAA	-11	NA	121742943	121697033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
Isoform_46358_3	chr14	-	7943	54	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	13.5083271392276	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGGTACCTAGTGGTG	NA	False	NA	0	True	AATAAA	-35	NA	122035299	121779525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
Isoform_46359_3	chr14	-	7903	54	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-57	-81	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	12.5739676944609	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCACTGCCCTGCTGTAA	NA	False	NA	-1	True	AATAAA	-18	NA	122035306	121779638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
Isoform_46360_7	chr14	-	7869	54	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-21	-82	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	12.5346085513012	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCACTGCCCTGCTGTA	NA	False	NA	-2	True	AATAAA	-17	NA	122035270	121779639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
Isoform_46362_3	chr14	-	7740	53	NIC	ENSMUSG00000025558.20	novel	8107	55	NA	NA	-41	-81	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	11.191448552804	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCACTGCCCTGCTGTAA	NA	False	NA	-1	True	AATAAA	-18	NA	122035290	121779638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
Isoform_46363_8	chr14	-	7808	53	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-38	-79	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	9.91970351126884	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGCCCTGCTGTAATT	NA	False	NA	1	True	AATAAA	-20	NA	122035287	121779636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
Isoform_46364_3	chr14	-	7750	53	NIC	ENSMUSG00000025558.20	novel	7368	53	NA	NA	105	3	combination_of_known_junctions	FALSE	canonical	3	32	junction_19	9.86634048450655	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGTTGTTTGGCCAT	NA	False	NA	-29	True	AATAAA	-6	NA	122035144	121779554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
Isoform_46365_3	chr14	-	7811	53	NIC	ENSMUSG00000025558.20	novel	7368	53	NA	NA	-40	-81	combination_of_known_junctions	FALSE	canonical	3	32	junction_19	9.86634048450655	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCACTGCCCTGCTGTAA	NA	False	NA	-1	True	AATAAA	-18	NA	122035289	121779638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
Isoform_46369_111	chr14	-	3944	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	841	-18	841	18	multi-exon	FALSE	canonical	3	83	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCACATCTCTGTCA	NA	False	NA	-8	True	AATAAA	-31	NA	122702248	122694188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_122697188_122701303
Isoform_46381_26	chr14	-	1037	3	FSM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	29	10	-13	1	multi-exon	FALSE	canonical	3	34	junction_2	3	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTGTTGCTGTTTGGT	NA	False	NA	-12	True	ATTAAA	-19	NA	123150545	123128281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_123129229_123137887_123137945_123150512
Isoform_46384_61	chr14	-	3373	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_13	34.630726201335	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGGTTTCT	NA	False	NA	-2	True	AGTAAA	-20	NA	123220661	123156388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
Isoform_46385_7	chr14	-	3281	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_16	48.7623997184058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220661	123156386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
Isoform_46392_246	chr14	-	3375	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	35	6	-8	1	multi-exon	FALSE	canonical	3	136	junction_13	13.8696352514015	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGGTTTCT	NA	False	NA	-2	True	AGTAAA	-20	NA	123220660	123156388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
Isoform_46395_32	chr14	-	3285	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	-3	combination_of_known_junctions	TRUE	canonical	3	23	junction_16	38.2839509410142	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTTGGTTTCTTTT	NA	False	NA	1	True	AGTAAA	-23	NA	123220661	123156385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
Isoform_46399_17	chr14	-	5672	29	Intergenic	novelGene_3377	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_26	12.7375389286621	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGGACAGTGTGTGT	NA	False	NA	1	True	AATAAA	-31	NA	10916264	10231198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040_10507190_10516877_10517058_10748553_10748659_10915440
Isoform_46403_3	chr14	-	3443	19	Intergenic	novelGene_3378	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_16	21.6216769372833	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGTGGACAGTGTGTG	NA	False	NA	0	True	AATAAA	-30	NA	10315906	10231199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10290412_10290500_10302885_10303019_10315336
Isoform_46409_5	chr14	-	3931	12	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	8	-78	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	65.9081504635099	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATATTGTCTTGTTTTTT	NA	False	NA	-20	True	AATAAA	-7	NA	58127725	58070237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_58073012_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
Isoform_46411_10	chr14	-	2532	2	NNC	ENSMUSG00000115313.2	novel	429	3	NA	NA	656	-13737	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTCTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	90322672	90315935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_90318195_90322399
Isoform_46412_10	chr14	-	3391	13	NNC	ENSMUSG00000059674.8	novel	3489	12	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.9537935951883	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGAGCCCGCTTCTG	NA	False	NA	-8	True	AATAAA	-14	NA	54878816	54868690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_54868991_54869080_54870070_54870503_54870753_54870915_54871028_54871106_54871229_54873789_54873927_54874777_54875032_54875460_54875649_54875783_54875952_54876024_54876145_54876327_54876623_54876800_54877119_54878677
Isoform_46413_3	chr14	-	739	2	Intergenic	novelGene_3661	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTCCTAGACCTTGT	NA	False	NA	-71	True	NA	NA	NA	76752969	76752053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_76752575_76752751
Isoform_46414_3	chr14	-	1620	7	NNC	ENSMUSG00000072294.6	novel	719	4	NA	NA	-34	-40876	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	8.78287475083693	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAATAGCCTGGTTCTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	100522149	100178512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_100179050_100179469_100179533_100224866_100225003_100260057_100260605_100347206_100347297_100387167_100387232_100521966
Isoform_46416_3	chr14	-	587	2	Antisense	novelGene_ENSMUSG00000034959.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAATACTGTGTTGG	NA	False	NA	NA	False	TTTAAA	-4	NA	75304598	75285366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_75285810_75304454
Isoform_46417_3	chr14	-	2767	2	Antisense	novelGene_ENSMUSG00000034959.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTGCCTTAGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	75304599	75283187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_75285810_75304454
Isoform_46419_7	chr14	-	3905	13	Fusion	ENSMUSG00000114797.2_ENSMUSG00000076270.3	novel	3080	6	NA	NA	-13	0	multi-exon	FALSE	canonical	1	1	junction_1	68.7432825001024	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAAACATTGTC	NA	False	NA	NA	False	NA	NA	NA	60488868	60461436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_-_60463793_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
Isoform_46420_5	chr14	-	5983	26	NNC	ENSMUSG00000022021.15	novel	3046	24	NA	NA	1	14643	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	56.1945762507379	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCATCTGTATTCAGTA	NA	False	NA	NA	False	AATAAA	-19	NA	87378599	87033199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_87036034_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
Isoform_46423_3	chr14	-	434	2	NNC	ENSMUSG00000115760.2	novel	965	2	NA	NA	718	104	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGATCAGTGTGTGAA	NA	False	NA	NA	False	NA	NA	NA	31877310	31876600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_31876977_31877252
Isoform_46425_3	chr14	-	696	3	NNC	ENSMUSG00000048349.10	novel	4445	3	NA	NA	-12	444	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGAGCAGTTTTATG	NA	False	NA	-20	True	AATAAA	-9	NA	104705447	104700964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_104701176_104701896_104701981_104705046
Isoform_46426_3	chr14	-	1045	9	NNC	ENSMUSG00000025277.15	novel	2226	9	NA	NA	-4	-6123	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.7991935352745	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTAGCTAGTCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	14466875	14419230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_14419339_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
Isoform_46427_3	chr14	+	1489	7	NIC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	89.5674792172546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTTCTGTACCAGCC	NA	False	NA	4	True	AATAAA	-16	NA	3575992	3896116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_3576112_3581246_3581431_3598151_3598203_3742290_3742333_3839264_3839398_3882697_3882846_3895304
Isoform_46428_21	chr14	+	1528	6	FSM	ENSMUSG00000058317.13	ENSMUST00000150727.8	1523	6	-7	2	-7	-2	multi-exon	FALSE	canonical	3	139	junction_1	30.1569229199532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTGTACCAGCCT	NA	False	NA	5	True	AATAAA	-17	NA	3575912	3896117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_3576112_3581246_3581431_3598151_3598203_3839264_3839398_3882697_3882846_3895304
Isoform_46429_130	chr14	+	1448	6	FSM	ENSMUSG00000058317.13	ENSMUST00000150727.8	1523	6	72	3	-11	-3	multi-exon	FALSE	canonical	3	139	junction_1	30.1569229199532	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTTCTGTACCAGCC	NA	False	NA	4	True	AATAAA	-16	NA	3575991	3896116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_3576112_3581246_3581431_3598151_3598203_3839264_3839398_3882697_3882846_3895304
Isoform_46430_3	chr14	+	1306	5	NIC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	75.1743806093539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTTCTGTACCAGCC	NA	False	NA	4	True	AATAAA	-16	NA	3576000	3896116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_3576112_3581246_3581431_3598151_3598203_3882697_3882846_3895304
Isoform_46431_16	chr14	+	1395	5	NIC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	75.1182401284801	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTTCTGTACCAGCC	NA	False	NA	4	True	AATAAA	-16	NA	3575993	3896116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_3576112_3581246_3581431_3839264_3839398_3882697_3882846_3895304
Isoform_46432_4	chr14	+	1545	7	NNC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	82.9894571617383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCTGTACCAGCCTT	NA	False	NA	6	True	AATAAA	-18	NA	3575993	3896118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_3576112_3576371_3576469_3581246_3581431_3598151_3598203_3839264_3839398_3882697_3882846_3895304
Isoform_46434_8	chr14	+	1546	6	NIC	ENSMUSG00000058317.13	novel	757	6	NA	NA	-30	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	66.9674547821552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTGTACCAGCCT	NA	False	NA	5	True	AATAAA	-17	NA	3576251	3896117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_3576469_3581246_3581431_3598151_3598203_3839264_3839398_3882697_3882846_3895304
Isoform_46435_287	chr14	+	1368	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	34	6	34	-6	multi-exon	FALSE	canonical	3	247	junction_1	27.2073519475895	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGACCCTGCTGTGTT	NA	False	NA	18	True	AATAAA	-15	NA	4137870	4186968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
Isoform_46436_126	chr14	+	1401	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	1	6	1	-6	multi-exon	FALSE	canonical	3	247	junction_1	27.2073519475895	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGACCCTGCTGTGTT	NA	False	NA	18	True	AATAAA	-15	NA	4137837	4186968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
Isoform_46442_613	chr14	+	1836	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	84	2	-13	-2	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTATGTTATCTTTTATG	NA	False	NA	NA	False	AATAAA	-16	NA	4198712	4201871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
Isoform_46443_6145	chr14	+	701	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	84	1137	-13	0	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	6145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198712	4200736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
Isoform_46445_384	chr14	+	739	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	46	1137	8	0	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198674	4200736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
Isoform_46453_474	chr14	+	804	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	877	junction_1	6301.70655898508	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198723	4200736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
Isoform_46457_712	chr14	+	826	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	57	0	-2	0	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198723	4200736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
Isoform_46471_202	chr14	+	4629	8	FSM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	34	0	34	0	multi-exon	FALSE	canonical	3	94	junction_5	14.9229312653721	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGTTTTGTTCTCTG	NA	False	NA	28	True	TATAAA	-18	NA	4230602	4265642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
Isoform_46474_3	chr14	+	3672	8	FSM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	-32	1023	-32	-1023	multi-exon	FALSE	canonical	3	94	junction_5	14.9229312653721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATGGTGTGTCTGT	NA	False	NA	NA	False	GATAAA	-18	NA	4230536	4264619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
Isoform_46475_5	chr14	+	7556	7	NIC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	11	-5	intron_retention	FALSE	canonical	3	101	junction_6	13.5328817658653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTTATTGTTTTGTT	NA	False	NA	23	True	TATAAA	-13	NA	4230579	4265637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4257918_4261566_4261778_4262814
Isoform_46477_3	chr14	+	3514	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112624.3	1586	3	-47	-1881	-47	-13	multi-exon	FALSE	canonical	1	1	junction_1	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACAAAAAAAGTCTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	6220541	6231098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_6220642_6226964_6227973_6228692
Isoform_46478_18	chr14	+	3465	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	4	-35	4	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATCAGCTGATTCTG	NA	False	NA	NA	False	AATAAA	-28	NA	6226435	6231111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_6226474_6226964_6227973_6228692
Isoform_4648_713	chr10	-	4383	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-8	3391	-8	-3391	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCATGGATTTCTTGGT	218	False	NA	-30	True	ATTAAA	-14	NA	119075968	119038550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
Isoform_46484_1607	chr14	+	1333	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	51	3	0	-3	multi-exon	FALSE	canonical	3	1151	junction_1	36.7689975886408	1607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTTTTCTTAAACAT	NA	False	NA	22	True	AATAAA	-24	NA	8348829	8357586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
Isoform_46493_7	chr14	+	974	9	FSM	ENSMUSG00000053453.10	ENSMUST00000225401.2	951	9	-23	0	-4	0	multi-exon	FALSE	canonical	3	34	junction_2	279.504472236134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508524	8520749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_8508579_8512131_8512210_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_46494_12	chr14	+	1035	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	287.160125191504	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508537	8520749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_8508579_8512131_8512284_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_46499_14	chr14	+	852	8	NIC	ENSMUSG00000053453.10	novel	937	8	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	208	junction_2	184.198207352397	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTTTGTGCTCATTCAA	NA	False	NA	19	True	AATAAA	-13	NA	8508540	8520748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_8508579_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_46504_100	chr14	+	872	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	63	2	1	0	multi-exon	FALSE	canonical	3	370	junction_1	118.776758531907	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508548	8520749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_46506_92	chr14	+	921	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	14	2	-3	0	multi-exon	FALSE	canonical	3	370	junction_1	118.776758531907	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508499	8520749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_46507_36	chr14	+	998	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-63	2	-63	0	multi-exon	FALSE	canonical	3	370	junction_1	118.776758531907	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508422	8520749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_46508_5	chr14	+	1318	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-383	2	192	0	multi-exon	TRUE	canonical	3	370	junction_1	118.776758531907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508102	8520749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_46509_15	chr14	+	1264	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-329	2	246	0	multi-exon	FALSE	canonical	3	370	junction_1	118.776758531907	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508156	8520749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_4651_143	chr10	-	4442	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-8	3332	-8	-3332	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCATGTTTCTTTCCTT	218	False	NA	-6	True	TTTAAA	-18	NA	119075968	119038491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
Isoform_46513_10	chr14	+	1009	8	NIC	ENSMUSG00000053453.10	novel	707	6	NA	NA	126	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	230.414976128918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508728	8520749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_8508896_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_46519_5	chr14	+	958	4	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-30	141567	-29	-141567	5prime_fragment	FALSE	canonical	3	157	junction_2	15.5134350376268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTACTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	13803503	13825785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303
Isoform_46521_5	chr14	+	2317	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-27	7943	-26	-7943	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAATTGGGACTCTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	13803506	13959409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
Isoform_46523_10	chr14	+	2866	14	ISM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-45	41397	-45	29832	5prime_fragment	FALSE	canonical	3	123	junction_12	20.0638035531091	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTTGTTAACATAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	13803487	13997184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360
Isoform_46524_11	chr14	+	2776	15	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	25	29833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	42.6329852176859	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTTAACATAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	13803558	13997185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996489_13996508
Isoform_46525_93	chr14	+	2694	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-14	1	-14	-1	multi-exon	FALSE	canonical	3	111	junction_15	21.4813614300605	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGTGCTTCCTTTTGTT	NA	False	NA	13	True	AATAAA	-13	NA	13803518	14038580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
Isoform_46528_18	chr14	+	2692	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-93	82	-93	-82	multi-exon	FALSE	canonical	3	111	junction_15	21.4813614300605	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAAAGTGTATTCTTGT	NA	False	NA	-68	True	AATAAA	-17	NA	13803439	14038499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
Isoform_46531_3	chr14	+	3315	5	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-32	-120243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.7319302270402	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACCTTATTTCTTGTA	NA	False	NA	NA	False	TATAAA	-45	NA	13803500	13847109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_13803795_13807424_13807515_13810290_13810385_13825303_13825377_13844345
Isoform_46538_383	chr14	+	1483	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	29	1	-15	-1	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGTCTTGGAGTACTAT	NA	False	NA	NA	False	AATAAA	-15	NA	14296776	14303776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
Isoform_4654_65	chr10	-	4507	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-8	3267	-8	-3267	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGAGTATTCATTTAAGA	218	False	NA	0	True	CATAAA	-18	NA	119075968	119038426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
Isoform_46540_1631	chr14	+	1433	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	79	1	-9	-1	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGTCTTGGAGTACTAT	NA	False	NA	NA	False	AATAAA	-15	NA	14296826	14303776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
Isoform_46568_3	chr14	+	1815	5	Fusion	ENSMUSG00000091275.2_ENSMUSG00000094370.8	novel	2055	7	NA	NA	-60	-3	multi-exon	FALSE	canonical	0	0	junction_1	7.79422863405995	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	16507967	16751434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_+_16508175_16744691_16744855_16745804_16745937_16746611_16746795_16750304
Isoform_46577_2047	chr14	+	4854	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	21	1	2	-1	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	2047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801353	19861854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
Isoform_46578_1382	chr14	+	4882	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	-6	0	-6	0	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801326	19861855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
Isoform_46581_57	chr14	+	5193	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-318	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	366.313291459647	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801014	19861855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828213_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
Isoform_4659_29	chr10	-	7779	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-8	-5	-8	5	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTTTTCCTTCAGAAT	218	False	NA	-22	True	AATAAA	-29	NA	119075968	119035154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
Isoform_46644_5	chr14	+	1871	10	NIC	ENSMUSG00000021809.11	novel	1633	10	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	5.20920363099157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTGTGAAGGTATATTT	NA	False	NA	NA	False	NA	NA	NA	20344774	20366829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20344861_20345155_20345335_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
Isoform_46645_3	chr14	+	1676	9	FSM	ENSMUSG00000021809.11	ENSMUST00000022343.6	2494	9	1	817	0	-1	multi-exon	FALSE	canonical	2	6	junction_1	3.70809924354783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTGTGAAGGTATATTT	NA	False	NA	NA	False	NA	NA	NA	20344790	20366829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
Isoform_46646_4	chr14	+	1800	8	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	0	496	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	78.3193358459259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398229	20418631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20398463_20401379_20401485_20402771_20402906_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
Isoform_46647_4	chr14	+	1736	8	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	3	495	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	78.3193358459259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGAATATGTTCTTTA	NA	False	NA	12	True	NA	NA	NA	20398292	20418630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20398463_20401379_20401485_20402771_20402906_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
Isoform_46648_6	chr14	+	2076	9	NIC	ENSMUSG00000039599.17	novel	2151	14	NA	NA	1	114	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	85.3814968245462	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGTACTTGTCCATGT	NA	False	NA	NA	False	AATAAA	-21	NA	20398252	20426469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20398463_20401379_20401485_20402771_20402906_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577
Isoform_46651_18	chr14	+	2881	7	ISM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-88	6085	10	13	5prime_fragment	FALSE	canonical	3	175	junction_5	36.4771618047969	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCCTCTGTTAGAGTT	NA	False	NA	20	True	NA	NA	NA	20398239	20415325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330
Isoform_46654_73	chr14	+	1772	8	FSM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-68	2779	2	496	multi-exon	FALSE	canonical	3	134	junction_7	47.5106862308097	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398259	20418631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
Isoform_46656_29	chr14	+	2092	9	ISM	ENSMUSG00000039599.17	ENSMUST00000225942.2	2151	14	-50	6874	10	115	5prime_fragment	FALSE	canonical	3	87	junction_7	68.9373583407429	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTACTTGTCCATGTG	NA	False	NA	NA	False	AATAAA	-22	NA	20398239	20426470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577
Isoform_46658_33	chr14	+	2419	14	FSM	ENSMUSG00000039599.17	ENSMUST00000090499.13	2370	14	-50	1	10	1	multi-exon	FALSE	canonical	3	48	junction_9	83.3254828649349	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTTTATTACATTTTAG	NA	False	NA	10	True	AATAAA	-19	NA	20398239	20433558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
Isoform_46659_5	chr14	+	2194	13	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	86.6052667118012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTTTATTACATTTTAG	NA	False	NA	10	True	AATAAA	-19	NA	20398239	20433558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20428467_20428592_20428831_20428952_20431816_20431890_20432984
Isoform_46660_8	chr14	+	2700	6	FSM	ENSMUSG00000039599.17	ENSMUST00000224930.2	2716	6	10	6	10	-6	multi-exon	FALSE	canonical	3	59	junction_5	79.7004391455907	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACAGCACCAGTTAAAT	NA	False	NA	1	True	NA	NA	NA	20398239	20415306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330
Isoform_46661_41	chr14	+	1630	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	10	496	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	78.3207436691512	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398239	20418631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20417913
Isoform_46662_9	chr14	+	1929	8	ISM	ENSMUSG00000039599.17	ENSMUST00000051915.7	1981	12	-50	7088	10	114	5prime_fragment	FALSE	canonical	3	59	junction_5	87.5522001728229	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGTACTTGTCCATGT	NA	False	NA	NA	False	AATAAA	-21	NA	20398239	20426469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20424397_20424523_20425577
Isoform_46664_8	chr14	+	2234	13	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	86.9643924578074	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTTTATTACATTTT	NA	False	NA	8	True	AATAAA	-17	NA	20398260	20433556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
Isoform_46666_12	chr14	+	4548	24	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	5	0	intron_retention	FALSE	canonical	2	9	junction_1	98.5648817623407	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724415	20744918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20724457_20725798_20725928_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
Isoform_46668_117	chr14	+	4501	24	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	56	junction_6	85.7457665656559	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724404	20744920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
Isoform_46669_620	chr14	+	4429	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	29	3	1	-1	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724404	20744917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
Isoform_46670_12	chr14	+	4492	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	-33	2	-33	0	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724342	20744918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
Isoform_46676_14	chr14	+	4621	23	NIC	ENSMUSG00000039367.12	novel	724	8	NA	NA	66	0	intron_retention	FALSE	canonical	3	25	junction_1	73.2329578516564	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724562	20744918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_20724806_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
Isoform_46697_28	chr14	+	4153	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	8	2	-1	-2	multi-exon	FALSE	canonical	3	28	junction_1	5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGTTTCTTTATTACA	NA	False	NA	NA	False	AATAAA	-21	NA	20745043	20751082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20745767_20745855_20746482_20748278
Isoform_4670_103	chr10	-	4518	13	FSM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	34	2	34	-2	multi-exon	FALSE	canonical	3	54	junction_7	7.32006375199925	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCCCAGTCTGTGGTTTT	NA	False	NA	-5	True	NA	NA	NA	119948858	119919514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
Isoform_46701_50	chr14	+	570	3	FSM	ENSMUSG00000063787.5	ENSMUST00000226072.2	578	3	1	7	1	-1	multi-exon	FALSE	canonical	3	132	junction_1	962	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTTGGCCATTTCT	NA	False	NA	26	True	AATAAA	-9	NA	20753126	20754486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20753266_20753343_20753477_20754188
Isoform_46703_796	chr14	+	556	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	53	7	1	-1	multi-exon	FALSE	canonical	3	1953	junction_1	51.5	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTTGGCCATTTCT	NA	False	NA	26	True	AATAAA	-9	NA	20753126	20754486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20753266_20753357_20753477_20754188
Isoform_46705_5	chr14	+	3695	9	ISM	ENSMUSG00000021819.12	ENSMUST00000022358.9	6073	26	21	8014	21	-6	intron_retention	FALSE	canonical	3	25	junction_2	3.90512483795333	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20757640	20765673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397
Isoform_46707_3	chr14	+	2383	10	ISM	ENSMUSG00000021819.12	ENSMUST00000223840.2	5674	27	11037	2	115	-1	3prime_fragment	FALSE	canonical	3	31	junction_3	9.79795897113271	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	15	True	TATAAA	-23	NA	20768953	20773685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
Isoform_46709_327	chr14	+	5260	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	2	5	2	-5	multi-exon	TRUE	canonical	3	265	junction_11	15.7968351260624	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGCTCTAATTGAGGT	NA	False	NA	NA	False	AATAAA	-14	NA	20979467	21083739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
Isoform_46710_379	chr14	+	5233	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	29	5	29	-5	multi-exon	FALSE	canonical	3	265	junction_11	15.7968351260624	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGCTCTAATTGAGGT	NA	False	NA	NA	False	AATAAA	-14	NA	20979494	21083739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
Isoform_4673_6	chr10	-	2326	7	ISM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	31214	7	-67	-7	3prime_fragment	FALSE	canonical	2	13	junction_2	4.19324854180304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGTTGTTTTGTTAA	NA	False	NA	NA	False	ATTAAA	-10	NA	120006350	119977559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222
Isoform_46739_19	chr14	+	303	2	FSM	ENSMUSG00000039197.11	ENSMUST00000223558.2	289	2	-9	-5	-9	5	multi-exon	FALSE	canonical	3	60	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATCCATTTTAACAGT	NA	False	NA	9	True	AATAAA	-20	NA	21102669	21103993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21102769_21103789
Isoform_4674_25	chr10	-	3024	12	FSM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	68	5	-4	-5	multi-exon	FALSE	canonical	2	13	junction_2	3.60440501847255	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTTGTTTTGTTAACT	NA	False	NA	NA	False	ATTAAA	-12	NA	120037496	119977557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430_120018614_120037231
Isoform_46740_20	chr14	+	946	8	NIC	ENSMUSG00000039197.11	novel	2224	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	129.691313258421	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGTTCTTCCCAACT	NA	False	NA	NA	False	ATTAAA	-15	NA	21102684	21376860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21376659
Isoform_46743_450	chr14	+	1752	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	28	2	-9	-2	multi-exon	FALSE	canonical	3	304	junction_9	34.7499640287584	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTCTGTCTTGCT	NA	False	NA	14	True	AATAAA	-17	NA	21102669	21498635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
Isoform_46748_19	chr14	+	1776	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	50	-8	50	1	multi-exon	FALSE	canonical	3	35	junction_1	100.003199948802	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTCTGTCTTGCTTGT	NA	False	NA	17	True	AATAAA	-20	NA	21126269	21498638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
Isoform_46749_13	chr14	+	1821	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	0	-3	0	3	multi-exon	FALSE	canonical	3	35	junction_1	100.003199948802	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATTTTTTTTCTGTCTTG	NA	False	NA	12	True	AATAAA	-15	NA	21126219	21498633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
Isoform_4675_3	chr10	-	3163	12	FSM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	-69	3	-69	-3	multi-exon	FALSE	canonical	2	13	junction_2	3.60440501847255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTTTTGTTAACTCA	NA	False	NA	NA	False	ATTAAA	-14	NA	120037633	119977555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430_120018614_120037231
Isoform_46753_3	chr14	+	1876	5	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	-730	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	9.33742469849155	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACATAAAAGAAATATAAAG	NA	False	NA	NA	False	AATACA	-1	NA	21531501	21669943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285
Isoform_4676_23	chr10	-	3531	5	FSM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	182	-3	5	3	multi-exon	FALSE	canonical	1	2	junction_1	7.32717544487642	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTGTGTGTTCAGTTT	NA	False	NA	-10	True	AATAAA	-23	NA	120312192	120197176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311857
Isoform_46760_71	chr14	+	6919	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	10	True	AATAAA	-20	NA	21531503	21722201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
Isoform_46761_4	chr14	+	7039	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-2	116	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATGAGATTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	21531499	21722317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
Isoform_46766_6	chr14	+	7582	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	47.1299732123836	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTGACTTTGATCT	NA	False	NA	4	True	AATAAA	-14	NA	21531503	21722537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
Isoform_46768_5	chr14	+	7793	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	47.4657771452233	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	NA	False	NA	9	True	AATAAA	-19	NA	21531501	21722200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675830_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
Isoform_46769_4	chr14	+	6995	17	NIC	ENSMUSG00000021767.20	novel	7699	17	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	51.8893052564784	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	NA	False	NA	9	True	AATAAA	-19	NA	21550951	21722200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
Isoform_46797_11	chr14	+	1603	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	7	3	7	-3	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTTTGTCCCAGGCTC	2638	False	NA	NA	False	AATATA	-22	NA	21800622	21843367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
Isoform_46798_7	chr14	+	7062	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	-28	-5421	-11	-3	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTTGTTATAACC	2603	False	NA	11	True	AATAAA	-15	NA	21800587	21848791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
Isoform_46806_297	chr14	+	1683	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	269	2	-28	-2	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCTGCAGTTTCTAAG	NA	False	NA	10	True	AATAAA	-20	NA	21881605	21895945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
Isoform_46807_1481	chr14	+	1340	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	254	360	-43	0	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881590	21895587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
Isoform_46809_451	chr14	+	1502	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	269	183	-28	177	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATGGCTCACGTATGTG	NA	False	NA	15	True	AATAAA	-14	NA	21881605	21895764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
Isoform_46811_42	chr14	+	1559	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	34	361	32	-1	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTGTGCATGTTTGT	NA	False	NA	21	True	AATAGA	-17	NA	21881370	21895586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
Isoform_46824_124	chr14	+	2807	4	FSM	ENSMUSG00000025290.18	ENSMUST00000223939.2	2769	4	-24	-14	-13	1	multi-exon	FALSE	canonical	3	9630	junction_1	1522.07774659071	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540772	24545927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450
Isoform_46833_999	chr14	+	570	6	FSM	ENSMUSG00000025290.18	ENSMUST00000169826.3	519	6	-37	-14	0	1	multi-exon	FALSE	canonical	3	4464	junction_5	3607.86166031903	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540748	24545927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
Isoform_46834_740	chr14	+	547	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	-34	1100	3	1	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540751	24545927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
Isoform_46835_780	chr14	+	513	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	0	1100	0	1	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540785	24545927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
Isoform_46866_4	chr14	+	6627	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-21	-143	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	15.4092324417683	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTAGGTGTTCATGTGG	-15	True	NA	11	True	AATAAA	-22	NA	25607759	25667024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
Isoform_46867_3	chr14	+	3549	18	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	67	-2788	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.7971286843441	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCATCGTCTTGCTGGTC	381	False	NA	NA	False	NA	NA	NA	25608328	25662355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690
Isoform_46869_8	chr14	+	6918	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	83	-9	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.544949486181	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAAGGTTCTGGTGA	397	False	NA	NA	False	AATAAA	-7	NA	25608344	25667158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
Isoform_46871_3	chr14	+	5369	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	-163	220	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.544949486181	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCGAGTCCTTTTTTAA	151	False	NA	NA	False	TTTAAA	-20	NA	25608098	25665363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
Isoform_46873_4	chr14	+	4991	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	91	114	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	16.3386234819201	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTTGTGAATATTT	405	False	NA	NA	False	NA	NA	NA	25608352	25665257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
Isoform_46876_840	chr14	+	1558	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	-12	3	4	1	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGTCTCTGGTTTT	380	False	NA	NA	False	AATAAA	-15	NA	25694581	25700889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
Isoform_46877_37	chr14	+	1602	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	-57	4	-41	0	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGCTGTCTCTGGTTT	335	False	NA	NA	False	AATAAA	-14	NA	25694536	25700888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
Isoform_46880_32	chr14	+	1465	5	NIC	ENSMUSG00000021868.8	novel	1549	6	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	49	junction_3	185.642633842552	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGTCTCTGGTTTT	376	False	NA	NA	False	AATAAA	-15	NA	25694577	25700889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_25694848_25695896_25695928_25696427_25696517_25698689_25698766_25699890
Isoform_46882_927	chr14	+	2360	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	28	6	1	-6	multi-exon	TRUE	canonical	3	387	junction_6	25.4603533329122	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTTTCTGGTGCCAGC	3	True	NA	20	True	AATAAA	-28	NA	25842607	25887222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
Isoform_46888_21	chr14	+	2444	16	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	139.082165962746	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	3	True	NA	26	True	AATAAA	-34	NA	25842607	25887228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_25842720_25843130_25843209_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
Isoform_46889_30	chr14	+	2413	16	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	139.082165962746	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	34	False	NA	26	True	AATAAA	-34	NA	25842638	25887228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_25842720_25843130_25843209_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
Isoform_46898_46	chr14	+	4051	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	0	2587	0	1152	multi-exon	TRUE	canonical	3	24	junction_11	139.009495679959	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGCTTGTGTTATGTGTC	NA	False	NA	24	True	ATTAAA	-24	NA	26300732	26352890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
Isoform_46902_10	chr14	+	4409	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	5	2224	5	1515	multi-exon	FALSE	canonical	3	24	junction_11	139.009495679959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTTGTGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	26300737	26353253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
Isoform_46909_1619	chr14	+	1683	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	60	422	60	22	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATGATTGTGTGTTC	1746	False	NA	0	True	AATAAA	-10	NA	26359288	26377991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
Isoform_4691_144	chr10	-	4746	13	FSM	ENSMUSG00000048661.15	ENSMUST00000119944.8	4743	13	-8	5	-8	-5	multi-exon	FALSE	canonical	3	97	junction_12	16.3112095062125	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCGTCTTTGTTT	NA	False	NA	-6	True	ATTAAA	-19	NA	120815245	120759322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
Isoform_46916_25	chr14	+	3368	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	66	-1269	66	1269	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAAGTTAAGCAGTTT	1752	False	NA	NA	False	AATAAA	-22	NA	26359294	26379682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
Isoform_4692_42	chr10	-	4774	13	FSM	ENSMUSG00000048661.15	ENSMUST00000119944.8	4743	13	-36	5	-36	-5	multi-exon	FALSE	canonical	3	97	junction_12	16.3112095062125	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCGTCTTTGTTT	NA	False	NA	-6	True	ATTAAA	-19	NA	120815273	120759322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
Isoform_46923_54	chr14	+	824	4	FSM	ENSMUSG00000040726.11	ENSMUST00000035433.10	1141	4	312	5	312	-1	multi-exon	FALSE	canonical	3	134	junction_1	19.2584757675391	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACCGGTATTTTAATAT	NA	False	NA	NA	False	AATAAA	-13	NA	26722630	26724281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_26722834_26723328_26723529_26723775_26723878_26723962
Isoform_46925_7	chr14	+	1059	5	NNC	ENSMUSG00000040726.11	novel	983	5	NA	NA	312	921	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	65.6620133715073	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCTTTCAAATTCATTT	NA	False	NA	12	True	AATAAA	-25	NA	26722630	26725207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_26722834_26723328_26723529_26723775_26723878_26723962_26724062_26724752
Isoform_46927_14	chr14	+	3359	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	48	4873	48	-96	multi-exon	FALSE	canonical	2	9	junction_1	4.46902922593064	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCTTGTACAGAAATTC	NA	False	NA	NA	False	AGTAAA	-18	NA	26760945	26824370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
Isoform_46929_4	chr14	+	8216	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	62	2	62	-2	multi-exon	FALSE	canonical	2	9	junction_1	4.46902922593064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCAGTGGCTCCTTA	NA	False	NA	3	True	AATAAA	-13	NA	26760959	26829241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
Isoform_46930_3	chr14	+	3292	13	NNC	ENSMUSG00000040717.7	novel	8280	13	NA	NA	-44	-96	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	5.67646212197547	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCTTGTACAGAAATTC	NA	False	NA	NA	False	AGTAAA	-18	NA	26760991	26824370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817880_26818045_26821439_26822383_26823233
Isoform_46932_4	chr14	+	1007	2	NNC	ENSMUSG00000040717.7	novel	2186	4	NA	NA	61	-34276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGGTGTCTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	26760958	26776930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_26761187_26776151
Isoform_46933_23	chr14	+	3681	13	NIC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	15.3622914957372	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACCTTTTCCTCCTG	NA	False	NA	NA	False	AATAAA	-8	NA	26836830	27125861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_26836881_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
Isoform_46935_4	chr14	+	1188	7	ISM	ENSMUSG00000021895.11	ENSMUST00000224981.2	3618	10	-30	9541	-30	-8938	5prime_fragment	FALSE	canonical	3	20	junction_1	15.4775823549919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGTGTGTTTGTGTG	NA	False	NA	NA	False	TATAAA	-33	NA	27057992	27116327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_27058227_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889
Isoform_46936_46	chr14	+	3655	10	FSM	ENSMUSG00000021895.11	ENSMUST00000224981.2	3618	10	-43	6	-43	1	multi-exon	FALSE	canonical	3	20	junction_1	14.3716112484489	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACCTTTTCCTCCTGT	NA	False	NA	NA	False	AATAAA	-9	NA	27057979	27125862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_27058227_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
Isoform_46942_10	chr14	+	4622	17	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	-20	14396	-20	2943	5prime_fragment	FALSE	canonical	3	136	junction_16	41.1035278291292	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAGAAATTTATTTTG	8908	False	NA	NA	False	AATAAA	-22	NA	27150770	27191116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462
Isoform_46944_4	chr14	+	8170	23	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	-33	3	-33	-3	intron_retention	FALSE	canonical	3	108	junction_17	57.5939763838414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8895	False	NA	13	True	AATAAA	-17	NA	27150757	27205509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
Isoform_46945_4	chr14	+	8101	23	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	34	5	34	-5	intron_retention	FALSE	canonical	3	108	junction_17	57.5939763838414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCTCGGGACTTT	8962	False	NA	11	True	AATAAA	-15	NA	27150824	27205507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
Isoform_46946_25	chr14	+	7539	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	51	0	51	0	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8979	False	NA	16	True	AATAAA	-20	NA	27150841	27205512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
Isoform_46947_21	chr14	+	7603	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	-16	3	-16	-3	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8912	False	NA	13	True	AATAAA	-17	NA	27150774	27205509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
Isoform_46949_12	chr14	+	7262	24	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	52	-2	intron_retention	FALSE	canonical	3	82	junction_23	68.3154033064469	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTCGGGACTTTGAT	8980	False	NA	14	True	AATAAA	-18	NA	27150842	27205510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
Isoform_46950_9	chr14	+	7321	24	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-5	0	intron_retention	FALSE	canonical	3	82	junction_23	68.3154033064469	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8923	False	NA	16	True	AATAAA	-20	NA	27150785	27205512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
Isoform_46954_7	chr14	+	8046	22	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	0	intron_retention	FALSE	canonical	3	154	junction_16	43.6998627519029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8962	False	NA	16	True	AATAAA	-20	NA	27150824	27205512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
Isoform_46956_81	chr14	+	7493	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-3	intron_retention	FALSE	canonical	3	154	junction_16	44.9305478737062	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8962	False	NA	13	True	AATAAA	-17	NA	27150824	27205509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
Isoform_46958_27	chr14	+	7523	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	4	-3	intron_retention	FALSE	canonical	3	154	junction_16	44.9305478737062	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8932	False	NA	13	True	AATAAA	-17	NA	27150794	27205509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
Isoform_46961_34	chr14	+	7220	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-2	intron_retention	FALSE	canonical	3	82	junction_22	59.3898035047312	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTCGGGACTTTGAT	8962	False	NA	14	True	AATAAA	-18	NA	27150824	27205510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
Isoform_46962_7	chr14	+	7288	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-32	0	intron_retention	FALSE	canonical	3	82	junction_22	59.3898035047312	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8896	False	NA	16	True	AATAAA	-20	NA	27150758	27205512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
Isoform_46965_4	chr14	+	5138	17	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-7	2947	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	70.1239694665811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTTATTTTGCTTT	8921	False	NA	NA	False	AATAAA	-26	NA	27150783	27191120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27188937
Isoform_46973_4	chr14	+	2646	4	NIC	ENSMUSG00000040640.12	novel	3339	8	NA	NA	-97	1401	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	17.7451088722749	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACATTCTTGTTTGTTTG	2229	False	NA	NA	False	AATAAA	-20	NA	27344287	27377160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27344572_27345639_27345707_27374643_27375441_27375662
Isoform_46975_11	chr14	+	1182	4	NIC	ENSMUSG00000040640.12	novel	3339	8	NA	NA	-32	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	17.7451088722749	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATTGTCTGTTTATT	2294	False	NA	17	True	ATTAAA	-14	NA	27344352	27375761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27344572_27345639_27345707_27374643_27375441_27375662
Isoform_46976_3	chr14	+	1139	4	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	19.3448241713959	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTATTGTCTGTTT	2321	False	NA	14	True	ATTAAA	-11	NA	27344379	27375758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27344572_27350368_27350423_27374643_27375441_27375662
Isoform_46977_4	chr14	+	2556	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-71	1404	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTTGTTTGTTTGTTT	2255	False	NA	NA	False	AATAAA	-23	NA	27344313	27377163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27344572_27374643_27375441_27375662
Isoform_46978_8	chr14	+	2488	3	NIC	ENSMUSG00000040640.12	novel	6233	20	NA	NA	0	1407	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTTGTTTGTTTGTT	2326	False	NA	NA	False	AATAAA	-26	NA	27344384	27377166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27344572_27374643_27375441_27375662
Isoform_46979_22	chr14	+	1088	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATTGTCTGTTTATT	2321	False	NA	17	True	ATTAAA	-14	NA	27344379	27375761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27344572_27374643_27375441_27375662
Isoform_4698_14	chr10	-	4655	11	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	-21	-4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	38.3198382042513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGCGTCTTTGTTTT	NA	False	NA	-5	True	ATTAAA	-20	NA	120815258	120759321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120813688
Isoform_46980_6	chr14	+	1146	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-64	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTATTGTCTGTTTAT	2262	False	NA	16	True	ATTAAA	-13	NA	27344320	27375760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_27344572_27374643_27375441_27375662
Isoform_46981_284	chr14	+	723	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	133	822	5	0	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGGTTGGTTTTG	NA	False	NA	11	True	AATAAA	-22	NA	29690397	29696797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_46982_67	chr14	+	771	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	85	822	-35	0	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGGTTGGTTTTG	NA	False	NA	11	True	AATAAA	-22	NA	29690349	29696797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_46983_17	chr14	+	956	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	135	587	7	235	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGATTTACTATTA	NA	False	NA	92	True	AATATA	-18	NA	29690399	29697032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_46984_124	chr14	+	898	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	133	647	5	175	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACATGTAAATTTGCTT	NA	False	NA	32	True	AATAAA	-21	NA	29690397	29696972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_46987_27	chr14	+	929	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	110	639	-10	183	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTTGCTTTTGAATTT	NA	False	NA	40	True	AATAAA	-29	NA	29690374	29696980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_46990_6	chr14	+	825	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	30	823	30	-1	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTGGTTGGTTTT	NA	False	NA	10	True	AATAAA	-21	NA	29690294	29696796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_46996_9	chr14	+	3871	11	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	70	6	2	-6	intron_retention	FALSE	canonical	3	289	junction_4	20.0199900099875	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATGACACTGATTTGA	NA	False	NA	15	True	ATTAAA	-19	NA	29700363	29715170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660
Isoform_46997_471	chr14	+	2044	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	70	5	2	-5	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGACACTGATTTGAG	NA	False	NA	16	True	ATTAAA	-20	NA	29700363	29715171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
Isoform_46999_9	chr14	+	3484	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	52	-1417	-16	-1231	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAAACTTGCTTTTGTT	NA	False	NA	3	True	ATTAAA	-41	NA	29700345	29716593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
Isoform_4700_3	chr10	-	5376	13	NIC	ENSMUSG00000052302.7	novel	5695	12	NA	NA	-135	-335	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.721687836487032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTGGCGGAGTCATTT	NA	False	NA	-3	True	CATAAA	-12	NA	121187318	121100059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_121103530_121107899_121108107_121111632_121111773_121115002_121115116_121124784_121124891_121130493_121130663_121132596_121132766_121137841_121138028_121140250_121140377_121142060_121142127_121142726_121142789_121183009_121183175_121186921
Isoform_47000_24	chr14	+	2323	14	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	-21	-1256	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	85.8768900035766	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTTGCTACTTACCG	NA	False	NA	3	True	ATTAAA	-16	NA	29700340	29716568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917_29715103_29716243
Isoform_47001_37	chr14	+	2301	14	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	1	-1256	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	85.8768900035766	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTTGCTACTTACCG	NA	False	NA	3	True	ATTAAA	-16	NA	29700362	29716568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917_29715103_29716243
Isoform_47002_12	chr14	+	2668	12	NIC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	1	-5	intron_retention	FALSE	canonical	3	289	junction_4	27.7366601098544	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGACACTGATTTGAG	NA	False	NA	16	True	ATTAAA	-20	NA	29700362	29715171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29713713_29714917
Isoform_47004_4	chr14	+	4806	3	FSM	ENSMUSG00000021962.10	ENSMUST00000225518.2	2044	3	22	-2784	-20	2784	multi-exon	FALSE	canonical	3	168	junction_2	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	30201613	30211020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30201774_30204149_30204191_30206415
Isoform_47006_40	chr14	+	5590	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	-22	8	-22	-1	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAAATTCTAATTGTGT	NA	False	NA	NA	False	AATAAA	-26	NA	30201546	30249012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
Isoform_47007_6	chr14	+	5727	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	-158	7	-81	0	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAATTCTAATTGTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	30201410	30249013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
Isoform_47008_240	chr14	+	5527	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	44	5	-21	2	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTAATTGTGTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	30201612	30249015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
Isoform_47009_6	chr14	+	5465	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-20	0	intron_retention	FALSE	canonical	2	2	junction_7	53.7655500762338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201613	30249020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30244684_30244904_30245182
Isoform_47010_39	chr14	+	5413	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-20	3	intron_retention	FALSE	canonical	3	24	junction_5	46.725093632865	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTAATTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	30201613	30249016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
Isoform_47011_8	chr14	+	5468	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-11	2	intron_retention	FALSE	canonical	3	24	junction_5	46.725093632865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTAATTGTGTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	30201557	30249015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
Isoform_47017_7698	chr14	+	2062	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	55	1106	5	-10	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	7698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAATCCTCAGACT	NA	False	NA	28	True	AATATA	-11	NA	30271142	30295571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
Isoform_47018_206	chr14	+	2122	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	-5	1106	-5	-10	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAATCCTCAGACT	NA	False	NA	28	True	AATATA	-11	NA	30271082	30295571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
Isoform_4702_165	chr10	-	3486	5	FSM	ENSMUSG00000025795.9	ENSMUST00000026902.9	3522	5	34	2	34	-2	multi-exon	FALSE	canonical	3	44	junction_2	3.60555127546399	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTATGTCTTTATTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	121312218	121246256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121248991_121250262_121250373_121251970_121252194_121252989_121253098_121311907
Isoform_47042_81	chr14	+	2346	13	FSM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	34	7	7	-7	multi-exon	FALSE	canonical	3	31	junction_11	8.01171017948103	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGATGTGTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	30376350	30413267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
Isoform_47044_13	chr14	+	2356	13	FSM	ENSMUSG00000052395.18	ENSMUST00000228686.2	2347	13	-14	5	6	-5	multi-exon	FALSE	canonical	3	5	junction_8	13.9351175093718	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGTGTCTTTCCCT	NA	False	NA	NA	False	NA	NA	NA	30376349	30413269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398865_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
Isoform_47045_3	chr14	+	3281	21	NIC	ENSMUSG00000006527.17	novel	2960	19	NA	NA	-6	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	24.2978908549693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGGCTCTAGGGTT	NA	False	NA	26	True	ATTAAA	-18	NA	30437117	30540302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30437199_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
Isoform_47046_13	chr14	+	3545	22	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	23.7565124142027	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGGCTCTAGGGTT	NA	False	NA	26	True	ATTAAA	-18	NA	30437579	30540302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
Isoform_47051_83	chr14	+	3454	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	8	4375	8	0	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGGCTCTAGGGTTT	NA	False	NA	27	True	ATTAAA	-19	NA	30437579	30540303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
Isoform_47052_38	chr14	+	4598	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	8	3231	8	1144	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGAATTTTTTTTTC	NA	False	NA	NA	False	AATATA	-22	NA	30437579	30541447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
Isoform_47057_4	chr14	+	3734	22	NIC	ENSMUSG00000006527.17	novel	3299	21	NA	NA	-346	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	25.9699809260048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTAAGTGGCTCTAGGG	NA	False	NA	24	True	ATTAAA	-16	NA	30438101	30540300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30438546_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
Isoform_47059_4	chr14	+	3608	21	FSM	ENSMUSG00000006527.17	ENSMUST00000228006.2	3299	21	-312	3	-312	-2	multi-exon	FALSE	canonical	2	11	junction_1	22.2285852001426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTAAGTGGCTCTAGGG	NA	False	NA	24	True	ATTAAA	-16	NA	30438135	30540300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30438546_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
Isoform_4706_255	chr10	-	2999	21	FSM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	21	4	11	1	multi-exon	FALSE	canonical	3	107	junction_12	17.7	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCTTGTGTGCTTTTG	3899	False	NA	-4	True	AATAAA	-18	NA	121422671	121382363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
Isoform_47060_3	chr14	+	3669	21	FSM	ENSMUSG00000006527.17	ENSMUST00000228006.2	3299	21	-370	0	-370	0	multi-exon	FALSE	canonical	2	11	junction_1	22.2285852001426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGGCTCTAGGGTTT	NA	False	NA	27	True	ATTAAA	-19	NA	30438077	30540303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30438546_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
Isoform_47063_177	chr14	+	3723	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	12	7	8	-7	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGGAGACATGGTGGTTG	NA	False	NA	NA	False	AATAAA	-25	NA	30547558	30599160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
Isoform_4707_8	chr10	-	4945	20	NIC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	-9	1	intron_retention	FALSE	canonical	3	107	junction_11	18.1066400945196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCTTGTGTGCTTTTG	3915	False	NA	-4	True	AATAAA	-18	NA	121422655	121382363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
Isoform_47071_3	chr14	+	1320	5	FSM	ENSMUSG00000021918.11	ENSMUST00000226833.2	1252	5	-68	0	-1	0	multi-exon	FALSE	canonical	3	44	junction_4	6.25999201277446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGCTCAGTGATTAAG	NA	False	NA	NA	False	NA	NA	NA	30673366	30681535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097
Isoform_47072_6	chr14	+	1236	5	FSM	ENSMUSG00000021918.11	ENSMUST00000226833.2	1252	5	18	-2	-3	2	multi-exon	FALSE	canonical	3	44	junction_4	6.25999201277446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTCAGTGATTAAGAG	NA	False	NA	NA	False	NA	NA	NA	30673452	30681537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097
Isoform_47075_37	chr14	+	4140	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	82	23	1	-20	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATTTTCACTTATGAT	NA	False	NA	4	True	NA	NA	NA	30673415	30710755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
Isoform_47077_6	chr14	+	2634	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	47	1417	13	-13	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAACTTTGAA	NA	False	NA	NA	False	TATAAA	-37	NA	30673380	30709358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
Isoform_47080_9	chr14	+	4012	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	86	0	5	0	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTGTGTATGGTGT	NA	False	NA	24	True	AGTAAA	-15	NA	30673419	30710775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
Isoform_47083_9	chr14	+	1594	11	NIC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	48.6193377165917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3527	False	NA	9	True	AATAAA	-20	NA	30723357	30733948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30723386_30726651_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
Isoform_47084_44	chr14	+	1496	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	1	1	1	-1	multi-exon	FALSE	canonical	3	45	junction_1	28.2055944017416	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTATTTGCTTCCCCATT	3527	False	NA	7	True	AATAAA	-18	NA	30723357	30733946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
Isoform_47085_3	chr14	+	1570	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	0	-72	0	71	multi-exon	TRUE	canonical	3	45	junction_1	28.2055944017416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATTTGCTCCCCCCCCC	3526	False	NA	80	True	AATAAA	-19	NA	30723356	30734019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
Isoform_47086_7	chr14	+	2037	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2321823686655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3557	False	NA	9	True	AATAAA	-20	NA	30723387	30733948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
Isoform_47087_26	chr14	+	1783	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	233	2	7	-1	multi-exon	FALSE	canonical	3	31	junction_1	32.2321823686655	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTATTTGCTTCCCCATT	3809	False	NA	7	True	AATAAA	-18	NA	30723639	30733946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
Isoform_47090_4	chr14	+	7981	32	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	52.4439743674197	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8245	False	NA	14	True	AATAAA	-21	NA	30741124	30843549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
Isoform_47093_4	chr14	+	7848	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	53.929882460675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGATCAGCCAGGTTT	8229	False	NA	12	True	AATAAA	-19	NA	30741108	30843547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
Isoform_47098_4	chr14	+	8104	33	FSM	ENSMUSG00000042323.18	ENSMUST00000112098.11	6566	33	13	-1551	2	0	multi-exon	FALSE	canonical	3	38	junction_15	51.2482373934704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8228	False	NA	14	True	AATAAA	-21	NA	30741107	30843549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
Isoform_47102_13	chr14	+	8058	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_27	42.8276316807247	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8228	False	NA	13	True	AATAAA	-20	NA	30741107	30843548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
Isoform_47103_15	chr14	+	7873	31	FSM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	33	1	1	-1	multi-exon	FALSE	canonical	3	94	junction_27	38.4939244845498	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8248	False	NA	13	True	AATAAA	-20	NA	30741127	30843548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
Isoform_47104_3	chr14	+	6345	31	FSM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	11	1551	0	0	multi-exon	FALSE	canonical	3	94	junction_27	38.4939244845498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8226	False	NA	NA	False	AAGAAA	-28	NA	30741105	30841998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
Isoform_47105_4	chr14	+	7717	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_27	41.5514808978429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8248	False	NA	13	True	AATAAA	-20	NA	30741127	30843548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
Isoform_47109_3	chr14	+	7963	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	45.4904629809614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8228	False	NA	14	True	AATAAA	-21	NA	30741107	30843549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
Isoform_47111_4	chr14	+	7624	29	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	58	junction_26	44.4163396115641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGATCAGCCAGGTTT	8244	False	NA	12	True	AATAAA	-19	NA	30741123	30843547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
Isoform_47114_4	chr14	+	7893	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	46.1102543427767	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8226	False	NA	14	True	AATAAA	-21	NA	30741105	30843549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30744676_30744817_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
Isoform_47117_7	chr14	+	7916	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	45.903473603736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	8228	False	NA	11	True	AATAAA	-18	NA	30741107	30843546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
Isoform_47118_5	chr14	+	7753	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	41.828936499227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8228	False	NA	13	True	AATAAA	-20	NA	30741107	30843548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
Isoform_47119_11	chr14	+	7575	29	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	44.8630569349774	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	8248	False	NA	11	True	AATAAA	-18	NA	30741127	30843546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
Isoform_47122_4	chr14	+	7485	28	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	47.7330827406807	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8244	False	NA	13	True	AATAAA	-20	NA	30741123	30843548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
Isoform_47136_1179	chr14	+	1808	14	FSM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	38	2	38	1	multi-exon	FALSE	canonical	3	528	junction_7	36.4029064448587	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCTGCTTCATTCCAG	NA	False	NA	18	True	AATAAA	-20	NA	30853047	30861079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
Isoform_47137_24	chr14	+	1854	14	FSM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	-11	5	-11	-2	multi-exon	FALSE	canonical	3	528	junction_7	36.4029064448587	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCTCTGCTTCATTC	NA	False	NA	15	True	AATAAA	-17	NA	30852998	30861076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
Isoform_4714_7	chr10	-	3404	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	358.057278099468	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACCAAGTCTTTTCCG	NA	False	NA	NA	False	AATAAA	-14	NA	121462385	121425530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_47141_19	chr14	+	1998	12	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	38	0	intron_retention	FALSE	canonical	3	592	junction_6	26.239519749687	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGCTTCATTCCAGC	NA	False	NA	19	True	AATAAA	-21	NA	30853047	30861080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
Isoform_47145_1348	chr14	+	3410	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	31	19	-22	-5	multi-exon	TRUE	canonical	3	305	junction_12	31.9899886683318	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTCTGGTTGCTAT	NA	False	NA	6	True	AATAAA	-13	NA	30973437	30981882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
Isoform_47151_28	chr14	+	3042	17	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	94.0883062606613	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTCTGGTTGCTAT	NA	False	NA	6	True	AATAAA	-13	NA	30973468	30981882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979582_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
Isoform_4716_8	chr10	-	6061	26	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-178	-2	combination_of_known_junctions	FALSE	canonical	3	151	junction_17	270.192008764138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	NA	False	NA	-10	True	AATAAA	-14	NA	121462415	121423286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_4717_4	chr10	-	3213	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	382.518697059372	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	9372	False	NA	NA	False	AATAAA	-19	NA	121464716	121425525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
Isoform_47174_497	chr14	+	3618	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	28	2	-9	-2	multi-exon	TRUE	canonical	3	214	junction_6	22.7354348979737	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGTAGTTTAATGTCC	NA	False	NA	13	True	AATAAA	-18	NA	31058622	31093939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
Isoform_47181_9	chr14	+	4618	21	FSM	ENSMUSG00000021893.15	ENSMUST00000143472.8	4613	21	-9	4	-9	-2	multi-exon	TRUE	canonical	3	18	junction_12	56.4505092979683	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGTAGTTTAATGTCC	NA	False	NA	13	True	AATAAA	-18	NA	31058622	31093939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
Isoform_47183_174	chr14	+	4039	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	705	174	-92	-174	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTCTTGTTTTATTT	6307	False	NA	NA	False	AATAAA	-20	NA	31217060	31231641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
Isoform_47184_566	chr14	+	4005	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	739	174	-58	-174	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTCTTGTTTTATTT	6341	False	NA	NA	False	AATAAA	-20	NA	31217094	31231641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
Isoform_47194_17	chr14	+	1931	4	FSM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	0	393	0	-393	multi-exon	FALSE	canonical	1	3	junction_2	7.40870359029762	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCGCAGAATACTGGCTG	NA	False	NA	4	True	AATAAA	-20	NA	31363013	31390143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31363093_31384026_31384283_31387838_31387989_31388697
Isoform_47196_9	chr14	+	2137	9	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	64.0858798800485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807327	31825160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_31807524_31807805_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_47197_5	chr14	+	1933	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	77.3866518047591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTTAATGTTTCAGTT	NA	False	NA	22	True	AATACA	-21	NA	31807327	31825161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_31807524_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_47198_170	chr14	+	1956	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	421	-1	0	1	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807790	31825160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_47203_10	chr14	+	2429	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	-52	-1	-13	1	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807317	31825160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_47204_15	chr14	+	1380	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	369	627	-3	-80	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGACTCCTGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	31807738	31824532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_47209_7	chr14	+	1954	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	2	23	junction_5	70.5948486297777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTTAATGTTTCAGTT	NA	False	NA	22	True	AATACA	-21	NA	31807733	31825161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821405_31821589_31822942_31823052_31824213
Isoform_47211_5	chr14	+	1701	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-21	-87	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	74.5727969223116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTCTTTAAATTATTGA	NA	False	NA	22	True	ATTAAA	-27	NA	31807812	31825072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821490_31821589_31822942_31823052_31824213
Isoform_47213_7	chr14	+	1749	7	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	81.7851181790156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807754	31825160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31822942_31823052_31824213
Isoform_47215_998	chr14	+	3401	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	62	602	-11	6	multi-exon	TRUE	canonical	3	533	junction_6	51.0289194210886	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTGTTATCTGT	NA	False	NA	4	True	ATTAAA	-19	NA	31881883	31901210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
Isoform_4722_14	chr10	-	3546	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-170	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	299.828675037929	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACCAAGTCTTTTCCG	NA	False	NA	NA	False	AATAAA	-14	NA	121462407	121425530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_47222_99	chr14	+	3398	10	NIC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	-11	6	combination_of_known_junctions	FALSE	canonical	3	55	junction_6	182.100365759865	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTGTTATCTGT	NA	False	NA	4	True	ATTAAA	-19	NA	31881883	31901210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896349_31896491_31897895_31898913_31899189_31899331_31899779
Isoform_47228_14	chr14	+	3810	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	1	20	junction_2	134.888086381826	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923915	32019174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_31924143_31930113_31930181_31930648_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
Isoform_4723_66	chr10	-	3464	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-88	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	299.828675037929	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACCAAGTCTTTTCCG	NA	False	NA	NA	False	AATAAA	-14	NA	121462325	121425530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_47234_287	chr14	+	3790	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	1	134	junction_15	101.735663996062	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923915	32019174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
Isoform_47239_36	chr14	+	4090	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	1	20	junction_2	123.492375400293	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923915	32019174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_31924423_31930113_31930181_31930648_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
Isoform_4724_13	chr10	-	5591	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	14	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	299.828675037929	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTGGAGTGGGCCTTT	NA	False	NA	-9	True	AATAAA	-15	NA	121462207	121423285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_47246_738	chr14	+	4071	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	10	332	10	-2	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCCATGCCACTTATAT	NA	False	NA	13	True	AATAAA	-26	NA	31923915	32019175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
Isoform_4725_81	chr10	-	6153	25	FSM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	-151	3	-151	-3	multi-exon	FALSE	canonical	3	537	junction_24	166.742560845221	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCATTGGAGTGGGCCT	NA	False	NA	-11	True	AATAAA	-13	NA	121462388	121423287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_47264_1543	chr14	+	3701	25	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	114.261570955515	1543	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTGGCCTCCTTT	NA	False	NA	8	True	AATAAA	-14	NA	32043971	32070104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462_32069787_32069808
Isoform_47268_34	chr14	+	3734	25	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-37	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_24	114.261570955515	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTGGCCTCCTTT	NA	False	NA	8	True	AATAAA	-14	NA	32043938	32070104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462_32069787_32069808
Isoform_47269_60	chr14	+	3837	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-5	intron_retention	FALSE	non_canonical	0	0	junction_23	116.422475564794	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043971	32070103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462_32069787_32069808
Isoform_47272_25	chr14	+	3654	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	116.114968675073	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTGGCCTCCTTT	NA	False	NA	8	True	AATAAA	-14	NA	32043971	32070104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_32044074_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
Isoform_47299_3	chr14	+	3678	11	ISM	ENSMUSG00000054051.8	ENSMUST00000066807.8	8423	21	47189	2498	8135	1388	3prime_fragment	FALSE	canonical	2	7	junction_1	4.31856457633784	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGGTTTTTCCTGT	NA	False	NA	2	True	AATAAA	-8	NA	32282666	32300449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
Isoform_47301_5	chr14	+	2387	2	ISM	ENSMUSG00000041673.13	ENSMUST00000120866.8	1231	3	3880	-1367	13	1367	3prime_fragment	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCACGTCCACAATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	32717234	32732720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_32717266_32730364
Isoform_47302_10	chr14	+	2362	3	ISM	ENSMUSG00000041673.13	ENSMUST00000038956.12	2587	4	3896	-2	13	2	3prime_fragment	FALSE	canonical	3	4	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAACATGGCTTCT	NA	False	NA	NA	False	AATAGA	-10	NA	32717234	32737250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_32717266_32730364_32731227_32735781
Isoform_47304_3	chr14	+	2362	8	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	-60	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	5.48839220351387	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGCCTGTCACCAGCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	33041599	33091890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_33041890_33065185_33065315_33081074_33081283_33084399_33084481_33085232_33085307_33086349_33086472_33088526_33089401_33091306
Isoform_47305_12	chr14	+	2316	8	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	2.66496544373966	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCTGTCACCAGCCTC	NA	False	NA	NA	False	ATTAAA	-15	NA	33041698	33091891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_33041890_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
Isoform_47306_11	chr14	+	2402	8	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	-52	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	2.66496544373966	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGGCGCCTGTCACCA	NA	False	NA	NA	False	ATTAAA	-10	NA	33041607	33091886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_33041890_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
Isoform_47308_13	chr14	+	1875	12	FSM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	1	4	1	-4	multi-exon	FALSE	canonical	2	6	junction_2	1.55345522642137	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTCTGTGGATTTGT	NA	False	NA	NA	False	CATAAA	-15	NA	33807938	33822524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
Isoform_47314_2213	chr14	+	3113	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-87	364	-87	-364	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTATGTTTCTTTT	NA	False	NA	10	True	ATTAAA	-13	NA	34032596	34066858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
Isoform_47316_129	chr14	+	3144	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-115	361	-115	-361	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTATGTTTCTTTTCTG	NA	False	NA	13	True	ATTAAA	-16	NA	34032568	34066861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
Isoform_47317_2800	chr14	+	2933	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	96	361	96	-361	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	2800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTATGTTTCTTTTCTG	NA	False	NA	13	True	ATTAAA	-16	NA	34032779	34066861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
Isoform_47319_104	chr14	+	3438	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-46	-2	-46	2	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCTCTATGGGGACGC	NA	False	NA	15	True	AATAAA	-24	NA	34032637	34067224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
Isoform_4732_17	chr10	-	3335	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2480	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	331.359444708042	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	9371	False	NA	NA	False	AATAAA	-20	NA	121464717	121425524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
Isoform_47324_126	chr14	+	3344	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	48	-2	48	2	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCTCTATGGGGACGC	NA	False	NA	15	True	AATAAA	-24	NA	34032731	34067224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
Isoform_4733_28	chr10	-	5956	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	-1	intron_retention	FALSE	canonical	3	239	junction_24	221.439792262417	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTGGAGTGGGCCTTT	9372	False	NA	-9	True	AATAAA	-15	NA	121464716	121423285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
Isoform_4737_6	chr10	-	4962	22	FSM	ENSMUSG00000020121.16	ENSMUST00000020322.12	7711	22	-524	3273	-517	976	multi-exon	FALSE	canonical	3	19	junction_11	9.24570133614962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGTGGGCTCCACT	NA	False	NA	46	True	NA	NA	NA	121883737	121620168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633_121664668_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
Isoform_47375_51	chr14	+	3914	7	FSM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	58	2	58	-2	multi-exon	FALSE	canonical	3	26	junction_3	15.3260852434302	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGCCTGTTTACTGT	4948	False	NA	4	True	AATAAA	-14	NA	34097479	34126242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
Isoform_4738_6	chr10	-	5050	22	FSM	ENSMUSG00000020121.16	ENSMUST00000020322.12	7711	22	-517	3178	-510	1071	multi-exon	FALSE	canonical	3	19	junction_11	9.24570133614962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATGATAGATTT	NA	False	NA	NA	False	NA	NA	NA	121883730	121620073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633_121664668_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
Isoform_4739_31	chr10	-	4988	22	FSM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-503	3302	-503	947	multi-exon	FALSE	canonical	3	28	junction_11	7.39093027569169	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCATTATAATCTCTAC	NA	False	NA	17	True	NA	NA	NA	121883723	121620197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
Isoform_47399_549	chr14	+	6368	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-17	0	-17	0	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395867	34469940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
Isoform_4740_12	chr10	-	5127	22	FSM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-518	3178	-518	1071	multi-exon	FALSE	canonical	3	28	junction_11	7.39093027569169	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATGATAGATTT	NA	False	NA	NA	False	NA	NA	NA	121883738	121620073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
Isoform_47400_289	chr14	+	6406	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-55	0	-55	0	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395829	34469940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
Isoform_47412_119	chr14	+	4582	19	FSM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	-260	-137	-15	0	multi-exon	FALSE	canonical	3	148	junction_3	211.44655367664	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGGTTGTTGTTCC	NA	False	NA	7	True	AATAAA	-19	NA	34395869	34468174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
Isoform_47413_115	chr14	+	6348	19	FSM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	-260	-1903	-15	0	multi-exon	FALSE	canonical	3	148	junction_3	211.44655367664	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395869	34469940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
Isoform_4743_98	chr10	-	1443	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	202	3148	-13	-2	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATGTATTCATAAGTGT	NA	False	NA	-12	True	AATAAA	-17	NA	121933074	121917166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
Isoform_4744_149	chr10	-	1373	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	274	3146	29	0	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933002	121917164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
Isoform_4746_3	chr10	-	1615	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	178	3000	-37	146	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGTTGAGTGGTTAAAG	NA	False	NA	NA	False	ATTAAA	-35	NA	121933098	121917018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
Isoform_47462_7	chr14	+	1434	4	Fusion	ENSMUSG00000115262.2_ENSMUSG00000094151.2	novel	690	2	NA	NA	-292	-337	multi-exon	FALSE	canonical	0	0	junction_1	11.6714276000077	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTCACTCTTAAGAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	42988568	43045108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_+_42988898_43039360_43039493_43040175_43040358_43044317
Isoform_47464_3	chr14	+	1255	3	Fusion	ENSMUSG00000115262.2_ENSMUSG00000094151.2	novel	690	2	NA	NA	-291	-333	multi-exon	FALSE	canonical	0	0	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTCTTAAGAAACTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	42988569	43045112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr14_+_42988898_43039360_43039493_43044317
Isoform_47465_28	chr14	+	1430	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228505.2	1591	4	-183	344	-1	-337	multi-exon	FALSE	canonical	3	45	junction_2	11.5854314646552	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTCACTCTTAAGAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	43132491	43163124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_43132821_43157302_43157435_43158114_43158297_43162337
Isoform_47466_5	chr14	+	1792	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228505.2	1591	4	-190	-11	-8	11	multi-exon	FALSE	canonical	3	45	junction_2	11.5854314646552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAACACAGACATGTAT	NA	False	NA	NA	False	AATAAA	-29	NA	43132484	43163479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_43132821_43157302_43157435_43158114_43158297_43162337
Isoform_4747_3	chr10	-	1527	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	256	3010	11	136	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGGCAGGATGGTTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	121933020	121917028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
Isoform_47473_330	chr14	+	2178	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	40	16	0	-16	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACCAAAGGACTAACCAT	NA	False	NA	NA	False	AATAAA	-23	NA	45567284	45587146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
Isoform_47474_465	chr14	+	1562	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	40	632	0	-632	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTCTTGTCTTTTCTA	NA	False	NA	30	True	AATAAA	-22	NA	45567284	45586530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
Isoform_47475_677	chr14	+	1310	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	43	881	3	-881	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGTATGTAATTCAGTA	NA	False	NA	23	True	AATAAA	-16	NA	45567287	45586281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
Isoform_4748_5	chr10	-	1657	7	NIC	ENSMUSG00000034620.18	novel	1546	7	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_5	138.233799533013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTATTCATAAGTGTA	NA	False	NA	-11	True	AATAAA	-18	NA	121933040	121917165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932252_121932367_121932804
Isoform_4749_19	chr10	-	1515	6	NIC	ENSMUSG00000034620.18	novel	1546	7	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	112.932546238894	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933011	121917164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932804
Isoform_4750_3	chr10	-	1583	6	NIC	ENSMUSG00000034620.18	novel	4793	6	NA	NA	-13	5	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	112.932546238894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCATAAGTGTAAATAGT	NA	False	NA	-5	True	AATAAA	-24	NA	121933074	121917159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932804
Isoform_47500_123	chr14	+	4227	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	131	8616	2	8	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTGAGAAGCTCATTCA	NA	False	NA	3	True	ATTAAA	-24	NA	45588680	45614348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
Isoform_47501_67	chr14	+	4286	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	71	8617	-13	7	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTGAGAAGCTCATTC	NA	False	NA	2	True	ATTAAA	-23	NA	45588620	45614347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
Isoform_47506_4	chr14	+	4547	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	70	8357	-14	267	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGGGAAAAGGCTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	45588619	45614607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
Isoform_47508_24	chr14	+	4487	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	131	8356	2	268	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGGGAAAAGGCTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	45588680	45614608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
Isoform_47515_16	chr14	+	808	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	-2	-69	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCTAATGCTTGAGTCA	NA	False	NA	3	True	NA	NA	NA	46998040	47009057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
Isoform_47516_51	chr14	+	739	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTCTCCAGCATAGT	NA	False	NA	3	True	AATAAA	-18	NA	46998030	47008978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
Isoform_47520_4	chr14	+	657	7	FSM	ENSMUSG00000037628.11	ENSMUST00000226621.2	634	7	-18	-5	-9	5	multi-exon	FALSE	canonical	3	26	junction_1	78.2254576351089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCCAGCATAGTCTGT	NA	False	NA	7	True	AATAAA	-22	NA	46998033	47008982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_46998106_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
Isoform_47523_40	chr14	+	1228	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	94	2	0	-2	multi-exon	FALSE	canonical	3	30	junction_4	10.2097992144802	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGGACACTGTCTTTG	631	False	NA	12	True	AATAAA	-22	NA	47069675	47091648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
Isoform_47524_3	chr14	+	1305	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	22	-3	22	3	multi-exon	FALSE	canonical	3	30	junction_4	10.2097992144802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACTGTCTTTGTCGAT	559	False	NA	17	True	AATAAA	-27	NA	47069603	47091653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
Isoform_4753_3	chr10	-	935	4	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	255	12202	10	-1294	5prime_fragment	FALSE	canonical	3	258	junction_3	23.6830928911088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCAGTGGCAGTAGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	121933021	121926220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_121926680_121930494_121930598_121931843_121932000_121932804
Isoform_47532_11	chr14	+	6878	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	-10	9	-10	-9	multi-exon	FALSE	canonical	3	35	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAAAAGCTTTGTCGTT	NA	False	NA	NA	False	AATAAA	-19	NA	47514377	47533550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47514679_47526973
Isoform_47534_10	chr14	+	6779	3	NNC	ENSMUSG00000048379.10	novel	538	3	NA	NA	71	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	17.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAAAGCTTTGTCGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	47514458	47533552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_47514679_47526973_47529935_47529954
Isoform_47540_297	chr14	+	4484	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGGTTTCTTTGTGTA	9649	False	NA	4	True	AAGAAA	-15	NA	47535744	47560549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557389
Isoform_47541_60	chr14	+	4596	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTTTGCATGTGAC	9649	False	NA	11	True	AATAAA	-16	NA	47535744	47560661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557389
Isoform_47544_13	chr14	+	3057	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	3	-1448	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGTTTTTGTGAAGTTG	9633	False	NA	NA	False	AATAAA	-21	NA	47535728	47559104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557387
Isoform_47547_9	chr14	+	3255	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	19	1268	19	-1268	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCTGGTAAGATACT	9649	False	NA	NA	False	NA	NA	NA	47535744	47559284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
Isoform_47550_4	chr14	+	1041	6	NIC	ENSMUSG00000050335.18	novel	646	5	NA	NA	493	3	combination_of_known_junctions	TRUE	canonical	3	5	junction_1	34.931933814205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47605700	47623254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47605826_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
Isoform_47551_52	chr14	+	951	6	FSM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	105	363	2	3	multi-exon	FALSE	canonical	3	33	junction_1	23.7941169199447	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611374	47623254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47611410_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
Isoform_47552_44	chr14	+	979	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	28	291	1	3	multi-exon	FALSE	canonical	3	42	junction_1	20.2286924935845	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611373	47623254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
Isoform_47553_7	chr14	+	3382	6	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	33.4269352468933	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47710090	47769413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47744721_47744904_47763661_47763772_47766631
Isoform_47554_6	chr14	+	3454	6	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	33.4269352468933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47710018	47769413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47744721_47744904_47763661_47763772_47766631
Isoform_47555_7	chr14	+	3271	5	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	35.4436171968946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47710019	47769413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47763661_47763772_47766631
Isoform_47558_45	chr14	+	3148	4	FSM	ENSMUSG00000037536.15	ENSMUST00000163324.8	3132	4	-22	6	-22	1	multi-exon	FALSE	canonical	3	23	junction_2	28.4526897771644	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47709995	47769413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47710175_47738250_47738328_47763661_47763772_47766631
Isoform_47562_14	chr14	+	3014	3	FSM	ENSMUSG00000037536.15	ENSMUST00000227162.2	373	3	-27	-2614	1	0	multi-exon	FALSE	canonical	3	11	junction_2	19	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTCTGGTCTTAAA	NA	False	NA	7	True	AATAAA	-15	NA	47710018	47769412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47710175_47738250_47738328_47766631
Isoform_47563_7	chr14	+	3065	4	NNC	ENSMUSG00000037536.15	novel	3132	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.5854581808798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47710082	47769413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_47710175_47738250_47738332_47763661_47763772_47766631
Isoform_47565_206	chr14	+	3048	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	-57	2	1	1	multi-exon	FALSE	canonical	3	71	junction_1	10.5	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47710018	47769413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47710175_47763661_47763772_47766631
Isoform_47566_42	chr14	+	3072	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	-81	2	-23	1	multi-exon	FALSE	canonical	3	71	junction_1	10.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47709994	47769413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47710175_47763661_47763772_47766631
Isoform_47570_54	chr14	+	2939	2	FSM	ENSMUSG00000037536.15	ENSMUST00000043112.9	2937	2	0	-2	0	1	multi-exon	FALSE	canonical	3	19	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47710017	47769413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_47710175_47766631
Isoform_47575_21	chr14	+	4369	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	166.916953527795	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886768	47974021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47580_16	chr14	+	4297	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	129	junction_1	159.321878224553	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886767	47974020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47584_13	chr14	+	4261	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	167.513152162066	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886787	47974019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47588_17	chr14	+	4177	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	159.488430792916	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886800	47974020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_4759_52	chr10	-	6150	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-354	-285	4	95	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGATTTGCCTTCTTG	NA	False	NA	-2	True	AATACA	-22	NA	122912284	122830968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
Isoform_47606_12	chr14	+	4461	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_38	176.407304781434	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886807	47974018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
Isoform_47609_67	chr14	+	4400	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	329	junction_36	142.740216389776	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886787	47974021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47612_16	chr14	+	4411	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	170.363095695635	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886787	47974020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
Isoform_47616_18	chr14	+	4437	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	173.452039480659	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886787	47974020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
Isoform_47618_88	chr14	+	4302	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	1	combination_of_known_junctions	FALSE	canonical	3	405	junction_36	132.185085310088	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACTCACTCTGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	47886807	47974015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47624_22	chr14	+	4371	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	1	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	177.511436251302	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACTCACTCTGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	47886807	47974015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
Isoform_47628_57	chr14	+	4312	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	329	junction_35	142.357057734826	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886787	47974020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_4763_15	chr10	-	6153	34	FSM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	-354	-497	4	95	multi-exon	FALSE	canonical	3	39	junction_22	24.7608209734668	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGATTTGCCTTCTTG	NA	False	NA	-2	True	AATACA	-22	NA	122912284	122830968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
Isoform_47634_16	chr14	+	4330	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	174.327531101471	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886807	47974020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
Isoform_47637_77	chr14	+	4218	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	354	junction_31	131.105569523613	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886807	47974018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47639_11	chr14	+	4090	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	111	combination_of_known_junctions	FALSE	canonical	3	354	junction_31	131.105569523613	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886778	47973861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47644_18	chr14	+	4343	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.349273439967	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886768	47974014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_4765_23	chr10	-	6055	34	FSM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	-354	-399	4	-3	multi-exon	FALSE	canonical	3	39	junction_22	24.7608209734668	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACAGTTGCATTTATTT	NA	False	NA	-100	True	AATAAA	-16	NA	122912284	122831066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
Isoform_47650_34	chr14	+	4233	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	1	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	142.486178072921	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACTCACTCTGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	47886807	47974015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47654_34	chr14	+	4224	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.220744725066	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886807	47974021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47662_30	chr14	+	4152	38	NIC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	141.712210556787	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886807	47974021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
Isoform_47670_14	chr14	+	5602	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	71	227	25	-227	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTAAGTTGTCTTTAG	NA	False	NA	2	True	ATTAAA	-13	NA	48358350	48498118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
Isoform_47672_43	chr14	+	1870	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	-35	4065	-35	-1	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATCTCAACTGCCATG	NA	False	NA	NA	False	ATTAAA	-20	NA	48358244	48494280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
Isoform_47674_9	chr14	+	5666	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	15	219	15	-219	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTTTAGACTCTTCT	NA	False	NA	10	True	ATTAAA	-21	NA	48358294	48498126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
Isoform_47677_6	chr14	+	1551	10	ISM	ENSMUSG00000036339.19	ENSMUST00000133744.8	2996	12	13	14356	13	4360	5prime_fragment	TRUE	canonical	3	30	junction_9	4.84067131350933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGGGGTTCTTGTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	48683821	48724613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197
Isoform_47679_21	chr14	+	5199	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	-9	295	-9	-295	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTCATATTCTCAGTG	NA	False	NA	NA	False	AATAGA	-15	NA	48683829	48752618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
Isoform_4768_16	chr10	-	1808	10	FSM	ENSMUSG00000034602.16	ENSMUST00000219203.2	1844	10	4	32	4	-32	multi-exon	FALSE	canonical	3	125	junction_3	13.8884444373331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAAAATGATTTGTATT	NA	False	NA	NA	False	AGTAAA	-36	NA	122912284	122871224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
Isoform_47683_4	chr14	+	5232	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	24	229	8	-229	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCAGGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	48683862	48752684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
Isoform_47686_6	chr14	+	2232	2	FSM	ENSMUSG00000036291.7	ENSMUST00000228238.2	3514	2	35	1247	0	-1247	multi-exon	FALSE	canonical	3	152	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTCATCCTGGGTG	NA	False	NA	NA	False	AATAAA	-16	NA	49303987	49312903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_49304322_49311005
Isoform_47688_6	chr14	+	2860	9	FSM	ENSMUSG00000036291.7	ENSMUST00000227410.2	2544	9	6	-322	-5	268	multi-exon	FALSE	canonical	3	29	junction_2	33.1200467994838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTTTTTGTCTTTTTT	NA	False	NA	30	True	ATTAAA	-15	NA	49303993	49325144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_49304322_49311005_49311200_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
Isoform_47690_73	chr14	+	3090	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	42	3189	-5	271	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGTCTTTTTTTTC	NA	False	NA	33	True	ATTAAA	-18	NA	49303993	49325147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
Isoform_47692_5	chr14	+	3189	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	-57	3189	-57	271	multi-exon	TRUE	canonical	3	109	junction_2	12.7487494384703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGTCTTTTTTTTC	NA	False	NA	33	True	ATTAAA	-18	NA	49303894	49325147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
Isoform_47695_45	chr14	+	6217	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	31	73	-5	8	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTATGCTTTTTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	49303982	49328263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
Isoform_47696_17	chr14	+	6290	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	31	0	-5	0	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAATTTGTGACATAA	NA	False	NA	NA	False	NA	NA	NA	49303982	49328336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
Isoform_47698_4	chr14	+	6373	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	-55	3	-55	-3	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATACATAAATTTGTGACA	NA	False	NA	NA	False	NA	NA	NA	49303896	49328333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
Isoform_47700_4	chr14	+	2464	9	NIC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	-15	4	intron_retention	FALSE	canonical	3	13	junction_8	38.1042976578758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTGTGACATAATAGC	NA	False	NA	NA	False	NA	NA	NA	49303972	49328340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49327656
Isoform_47701_7	chr14	+	2373	9	NIC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	-5	4	intron_retention	FALSE	canonical	3	13	junction_8	38.1042976578758	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTCTTATGCTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49303982	49328259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49327656
Isoform_47702_5	chr14	+	2871	7	NIC	ENSMUSG00000036291.7	novel	6321	8	NA	NA	-3	271	intron_retention	FALSE	canonical	3	8	junction_2	45.2683357571517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGTCTTTTTTTTC	NA	False	NA	33	True	ATTAAA	-18	NA	49303984	49325147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_49304322_49311005_49311652_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
Isoform_47706_453	chr14	+	4452	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-2	-4	-2	4	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTGTGCATTCTATAA	NA	False	NA	41	True	AATAAA	-38	NA	49409680	49428346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
Isoform_47716_10	chr14	+	3657	4	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	144.652072996629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACAGCTGTGTGCATTC	NA	False	NA	36	True	AATAAA	-33	NA	49409692	49428341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_49409835_49415508_49415633_49418162_49418219_49425006
Isoform_47723_29	chr14	+	1876	16	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	196.861327391192	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045382	51058757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_51045445_51047462_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
Isoform_47727_39	chr14	+	1797	16	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	194.893064696173	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045382	51058757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052413_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
Isoform_47731_1039	chr14	+	1809	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	85	0	0	0	multi-exon	FALSE	canonical	3	692	junction_5	52.2695577431708	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045382	51058758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
Isoform_47733_46	chr14	+	2193	15	FSM	ENSMUSG00000036023.7	ENSMUST00000228672.2	2173	15	-20	0	0	0	multi-exon	FALSE	canonical	3	708	junction_7	45.539397610134	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045382	51058757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
Isoform_47734_15	chr14	+	2403	14	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	749	junction_2	38.1001483169705	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045381	51058758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
Isoform_47738_906	chr14	+	1224	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	15	0	5	0	multi-exon	FALSE	canonical	3	716	junction_1	194.901898400195	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	194	False	NA	14	True	AATAAA	-15	NA	51162439	51164596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
Isoform_47739_163	chr14	+	1229	5	FSM	ENSMUSG00000035960.15	ENSMUST00000136753.8	655	5	14	-588	5	0	multi-exon	FALSE	canonical	3	124	junction_1	445.940298694792	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	194	False	NA	14	True	AATAAA	-15	NA	51162439	51164596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_51162492_51162669_51162782_51162973_51163162_51163617_51163811_51163912
Isoform_4774_169	chr10	-	3231	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	55	8239	1	-17	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGTTTTGATGAATTA	NA	False	NA	-15	True	AATAAA	-15	NA	123032845	122949149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
Isoform_47740_164	chr14	+	1390	4	FSM	ENSMUSG00000035960.15	ENSMUST00000154288.3	935	4	22	-477	22	0	multi-exon	FALSE	canonical	3	1054	junction_2	68.6310587286997	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	211	False	NA	14	True	AATAAA	-15	NA	51162456	51164596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_51162782_51162973_51163162_51163617_51163811_51163912
Isoform_47747_162	chr14	+	1335	6	FSM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	207	1400	3	1118	multi-exon	FALSE	canonical	3	117	junction_1	38.2015706483385	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTGTGTGGTTCGGTA	9237	False	NA	5	True	AATAAA	-17	NA	51181965	51189469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
Isoform_47749_16	chr14	+	1258	6	FSM	ENSMUSG00000068417.9	ENSMUST00000095925.5	1372	6	118	-4	118	4	multi-exon	FALSE	canonical	2	7	junction_3	36.6911433454996	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	51193566	51202210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_51193686_51196971_51197142_51200561_51200666_51200846_51201023_51201135_51201327_51201712
Isoform_47750_3	chr14	+	1287	2	FSM	ENSMUSG00000021876.16	ENSMUST00000022428.13	1518	2	64	167	64	-167	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACATATTGCCAAAAT	NA	False	NA	NA	False	NA	NA	NA	51328597	51343437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_51328711_51342263
Isoform_47751_13	chr14	+	1600	13	FSM	ENSMUSG00000004561.15	ENSMUST00000164902.8	1461	13	-13	-126	-2	1	multi-exon	FALSE	canonical	0	0	junction_8	49.8556248916141	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122389	52129318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823
Isoform_47753_226	chr14	+	1524	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	92	7	-1	1	multi-exon	FALSE	canonical	0	0	junction_8	48.1261901412816	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122390	52129318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_47755_16	chr14	+	1587	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	29	7	-5	1	multi-exon	FALSE	canonical	0	0	junction_8	48.1261901412816	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122327	52129318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_47756_4	chr14	+	1708	14	NIC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	42.8658289309892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122386	52129318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126855_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_47757_11	chr14	+	1469	13	FSM	ENSMUSG00000004561.15	ENSMUST00000165100.8	1430	13	29	-68	0	1	multi-exon	FALSE	canonical	3	48	junction_7	37.728102552636	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122374	52129318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_47758_18	chr14	+	2144	12	NIC	ENSMUSG00000004561.15	novel	1430	13	NA	NA	-1	1	intron_retention	FALSE	canonical	3	141	junction_9	16.6465443265721	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122390	52129318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_47760_4	chr14	+	1509	14	NIC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	63.7277864767855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122389	52129318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_52122481_52122607_52122762_52122860_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_47761_9	chr14	+	1610	13	NIC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_7	50.0157614046701	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122387	52129318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_52122481_52122607_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_47762_4	chr14	+	1540	12	FSM	ENSMUSG00000004561.15	ENSMUST00000163603.8	1513	12	40	-67	-6	0	multi-exon	FALSE	canonical	3	48	junction_6	39.3664706097011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122385	52129317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_52122481_52122607_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_47763_5	chr14	+	3615	10	NIC	ENSMUSG00000004561.15	novel	3404	11	NA	NA	7	-3	intron_retention	FALSE	canonical	3	141	junction_7	17.8207813216363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGGTGGATGTTCTGAT	NA	False	NA	NA	False	AATAAA	-13	NA	52122381	52129322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_52122481_52122607_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_47765_10	chr14	+	1346	4	FSM	ENSMUSG00000072572.10	ENSMUST00000047726.12	2334	4	50	938	50	1	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTGCAATTCTGCCT	NA	False	NA	15	True	AATAAA	-26	NA	52131116	52133264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_52131372_52131545_52131677_52131912_52131964_52132355
Isoform_47766_3	chr14	+	5124	24	FSM	ENSMUSG00000004562.17	ENSMUST00000093813.12	5621	24	-131	628	-12	0	multi-exon	FALSE	canonical	2	2	junction_21	8.41571129479579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACTCTGAGGAGCTCG	NA	False	NA	3	True	ATTAAA	-15	NA	52222163	52243080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242797
Isoform_47767_4	chr14	+	4950	23	FSM	ENSMUSG00000004562.17	ENSMUST00000182061.8	4756	23	-185	-9	27	-1	multi-exon	FALSE	canonical	3	11	junction_3	6.51951932518073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAGCTCGCGCAGGCCT	NA	False	NA	12	True	ATTAAA	-24	NA	52222202	52243089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242445_52242493_52242797
Isoform_47770_27	chr14	+	3464	10	FSM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	-5	1891	-5	-1891	multi-exon	FALSE	canonical	3	15	junction_1	167.945390889383	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTTTTAAATGTGCAT	NA	False	NA	6	True	AGTAAA	-18	NA	52516597	52531967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_52516690_52516844_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
Isoform_47773_1146	chr14	+	3171	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	443	1891	24	-1891	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTTTTAAATGTGCAT	NA	False	NA	6	True	AGTAAA	-18	NA	52517045	52531967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
Isoform_4778_60	chr10	-	4724	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	71	6730	2	0	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTTTATTTCTTA	NA	False	NA	-1	True	AATAAA	-16	NA	123032829	122947640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
Isoform_47783_36	chr14	+	5055	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	443	7	24	-7	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGCAATTCTAGTCTG	NA	False	NA	14	True	AAAAAG	-7	NA	52517045	52533851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
Isoform_47795_41	chr14	+	2594	7	FSM	ENSMUSG00000040997.15	ENSMUST00000180359.8	2508	7	4	-90	4	1	multi-exon	FALSE	canonical	3	19	junction_1	134.648616777151	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGACACTGTTTAATAT	NA	False	NA	12	True	AATAAA	-19	NA	54491648	54506622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54491929_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
Isoform_47799_690	chr14	+	2368	7	FSM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	34	-1	-7	1	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGACACTGTTTAATAT	NA	False	NA	12	True	AATAAA	-19	NA	54496722	54506622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
Isoform_47802_22	chr14	+	2831	7	FSM	ENSMUSG00000040997.15	ENSMUST00000239403.2	2406	7	16	-441	16	441	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGTTAGTGGCTAAGAG	NA	False	NA	NA	False	AATAAA	-18	NA	54496704	54507067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
Isoform_47808_13	chr14	+	2457	7	NIC	ENSMUSG00000040997.15	novel	2406	7	NA	NA	6	2	intron_retention	FALSE	canonical	1	3	junction_1	140.486555307696	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACACTGTTTAATATT	NA	False	NA	13	True	AATAAA	-20	NA	54496741	54506623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_54496884_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
Isoform_47814_15	chr14	+	2535	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	3	0	-3	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAGTTCAGAGTTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	54598297	54607127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
Isoform_47815_42	chr14	+	2309	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	229	0	-229	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACATAACTTTTTTATTG	NA	False	NA	4	True	AATAAA	-16	NA	54598297	54606901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
Isoform_47816_502	chr14	+	1505	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	1033	0	3	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTTGTCTGGGCTT	NA	False	NA	24	True	AGTAAA	-1	NA	54598297	54606097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
Isoform_47817_14	chr14	+	1529	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	-27	1036	-20	0	multi-exon	TRUE	canonical	3	499	junction_4	29.1475598792348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTTGTCTGGG	NA	False	NA	21	True	ATTAAA	-44	NA	54598270	54606094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
Isoform_4782_29	chr10	-	3186	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	-17	1497	-4	-5	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTATGTTTTCTTTAA	NA	False	NA	-3	True	AATAAA	-27	NA	123032875	122949137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
Isoform_47820_11	chr14	+	1645	9	ISM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	282	1015	78	21	3prime_fragment	FALSE	canonical	3	499	junction_3	30.0333148353624	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGATGTTTGTTAAGTA	NA	False	NA	42	True	AGTAAA	-19	NA	54598579	54606115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
Isoform_47825_566	chr14	+	410	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	1	7	1	0	multi-exon	FALSE	canonical	3	1056	junction_1	196.876230154887	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	False	NA	20	True	AATAAA	-21	NA	54664366	54667206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
Isoform_47826_68	chr14	+	487	4	NIC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1056	junction_1	226.233409459248	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCCAGACTCTCTCTGG	NA	False	NA	17	True	AATAAA	-18	NA	54664365	54667203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_54664418_54664490_54664696_54666040_54666106_54667038
Isoform_47827_13	chr14	+	473	4	FSM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	-5	-5	2	-2	multi-exon	FALSE	canonical	3	1331	junction_1	96.858430482615	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTCTCTGGCTTTCTTT	NA	False	NA	25	True	AATAAA	-26	NA	54664381	54667211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54664549_54664627_54664696_54666040_54666106_54667038
Isoform_47829_20	chr14	+	2540	10	FSM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	-8	64	-8	-64	multi-exon	FALSE	canonical	0	0	junction_5	5.50644964149505	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	54669060	54678658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
Isoform_4783_330	chr10	-	3128	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	31	1507	4	-15	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTTTGATGAATTATG	NA	False	NA	-13	True	AATAAA	-17	NA	123032827	122949147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
Isoform_47832_7	chr14	+	3582	11	NNC	ENSMUSG00000000957.12	novel	2596	10	NA	NA	-4	1006	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	6.49923072370877	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAATCGTTCCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	54669064	54679728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797_54678662_54678685
Isoform_47833_722	chr14	+	2976	7	FSM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	35	1217	35	537	multi-exon	FALSE	canonical	3	169	junction_1	20.8306664959782	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701628	54707737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
Isoform_47834_204	chr14	+	3000	7	FSM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	11	1217	11	537	multi-exon	TRUE	canonical	3	169	junction_1	20.8306664959782	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701604	54707737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
Isoform_47837_10	chr14	+	3249	6	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	16	537	intron_retention	FALSE	canonical	3	169	junction_1	22.7543402453246	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701609	54707737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706623_54706721
Isoform_47839_11	chr14	+	3001	7	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	22	537	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	73.7346970940788	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701615	54707737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_54702069_54702360_54702406_54703030_54703179_54704916_54705108_54705220_54706239_54706492_54706623_54706721
Isoform_4784_123	chr10	-	4638	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	29	-1	2	1	multi-exon	TRUE	canonical	3	255	junction_15	80.7788802843912	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTCTTTTATTTCTTAC	NA	False	NA	0	True	AATAAA	-17	NA	123032829	122947639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
Isoform_47844_6	chr14	+	1768	5	FSM	ENSMUSG00000022176.12	ENSMUST00000164766.8	1884	5	116	0	-24	0	multi-exon	FALSE	canonical	1	2	junction_4	2.29128784747792	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTTATCTTGGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	54713672	54717888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54713832_54714927_54715273_54715484_54715559_54716410_54716619_54716906
Isoform_47845_21	chr14	+	1491	3	FSM	ENSMUSG00000040822.8	ENSMUST00000228027.2	811	3	-58	-622	-37	-6	multi-exon	FALSE	canonical	3	26	junction_1	179.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAATTACTGGTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	54923635	54928192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54924111_54924493_54924578_54927260
Isoform_47848_71	chr14	+	1872	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	-35	6	-35	-6	multi-exon	FALSE	canonical	3	385	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAATTACTGGTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	54923637	54928192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54924578_54927260
Isoform_47849_135	chr14	+	1025	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	812	6	-16	-6	multi-exon	FALSE	canonical	3	385	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAATTACTGGTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	54924484	54928192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_54924578_54927260
Isoform_4785_12	chr10	-	4687	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	-21	0	-8	0	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTTTATTTCTTA	NA	False	NA	-1	True	AATAAA	-16	NA	123032879	122947640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
Isoform_47854_11	chr14	+	1224	15	FSM	ENSMUSG00000112858.3	ENSMUST00000218311.2	1201	15	-9	-14	-9	1	multi-exon	TRUE	canonical	3	13	junction_1	4.37525509460387	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGTATGAGGGTATA	NA	False	NA	15	True	ATTAAA	-19	NA	55051588	55091566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55051743_55053942_55054044_55056993_55057047_55057594_55057670_55075569_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
Isoform_47855_10	chr14	+	3513	4	FSM	ENSMUSG00000089682.11	ENSMUST00000022806.10	3509	4	-5	1	-5	-1	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGAACAGGGTTTTGT	NA	False	NA	24	True	AATAAA	-28	NA	55120828	55125690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55120964_55121253_55121342_55121830_55122271_55122840
Isoform_47862_86	chr14	+	2607	5	FSM	ENSMUSG00000022194.16	ENSMUST00000150975.8	1775	5	-10	-822	-3	749	multi-exon	FALSE	canonical	3	2245	junction_1	156.472641378613	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131601	55136375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408
Isoform_47863_342	chr14	+	2526	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	-3	-762	-3	749	multi-exon	FALSE	canonical	3	2245	junction_1	149.688209288507	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131601	55136375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
Isoform_47872_1654	chr14	+	1782	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	-3	-749	-3	749	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131601	55136375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
Isoform_47894_596	chr14	+	1092	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	102	6	102	-6	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253012	55261588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
Isoform_47895_17	chr14	+	1168	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	26	6	26	-6	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55252936	55261588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
Isoform_47896_10	chr14	+	1356	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	96	-252	96	252	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCGTTTGTTGACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	55253006	55261846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
Isoform_47901_10	chr14	+	1012	10	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	110	-6	combination_of_known_splicesites	FALSE	canonical	2	22	junction_2	462.088976520997	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253020	55261588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55253046_55253625_55253686_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
Isoform_47906_110	chr14	+	2517	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	311	2	311	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGGGTCTTTATTTCCG	NA	False	NA	5	True	AATAAA	-16	NA	55332551	55336441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55333464_55334836
Isoform_47908_88	chr14	+	2786	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	44	0	44	0	multi-exon	FALSE	canonical	3	37	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTCTTTATTTCCGTT	NA	False	NA	7	True	AATAAA	-18	NA	55332284	55336443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55333464_55334836
Isoform_47910_3	chr14	+	1006	4	ISM	ENSMUSG00000022210.8	ENSMUST00000226168.2	828	5	-88	6	8	0	intron_retention	FALSE	canonical	3	56	junction_3	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCCTAGTCTCTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	55716243	55725028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549
Isoform_47912_24	chr14	+	1371	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	20	1	-1	1	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGCGTGTTTATTTCT	NA	False	NA	10	True	AATAAA	-25	NA	55716234	55727796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
Isoform_47913_38	chr14	+	1245	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	145	2	-3	0	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGCGTGTTTATTTC	NA	False	NA	9	True	AATAAA	-24	NA	55716359	55727795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
Isoform_47917_2912	chr14	+	2131	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	1146	0	-1	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	2912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACAGGACTCCCCATGC	9014	False	NA	26	True	ATTAAA	-23	NA	55777845	55786328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_47918_724	chr14	+	2211	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	43	1146	43	-1	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACAGGACTCCCCATGC	8934	False	NA	26	True	ATTAAA	-23	NA	55777765	55786328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_47919_1589	chr14	+	2198	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	1079	0	4	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTCTGCATAGGCTT	9014	False	NA	35	True	NA	NA	NA	55777845	55786395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_4792_5	chr10	+	4179	2	Antisense	novelGene_ENSMUSG00000020124.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123001399	123008305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_123004278_123007004
Isoform_47921_414	chr14	+	2274	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	45	1081	45	2	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTGTCTGCATAGGC	8936	False	NA	33	True	NA	NA	NA	55777767	55786393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_47928_106	chr14	+	3083	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	194	0	-1	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGCAGTTGGAAGAATG	9014	False	NA	3	True	NA	NA	NA	55777845	55787280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_4795_5	chr10	-	908	6	FSM	ENSMUSG00000025436.13	ENSMUST00000026504.13	903	6	-9	4	-9	-4	multi-exon	FALSE	canonical	3	15	junction_1	67.2767418949521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATCTGTTTGACACAT	NA	False	NA	-30	True	AATAAA	-15	NA	126737233	126704299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126704595_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
Isoform_4796_5	chr10	-	887	6	FSM	ENSMUSG00000025436.13	ENSMUST00000026504.13	903	6	12	4	5	-4	multi-exon	FALSE	canonical	3	15	junction_1	67.2767418949521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATCTGTTTGACACAT	NA	False	NA	-30	True	AATAAA	-15	NA	126737212	126704299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126704595_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
Isoform_4797_66	chr10	-	1086	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	-42	-1	-35	1	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATTTTTTGGCTCTTT	NA	False	NA	1	True	AATAAA	-26	NA	126737259	126723116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
Isoform_4798_81	chr10	-	1035	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	9	-1	9	1	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATTTTTTGGCTCTTT	NA	False	NA	1	True	AATAAA	-26	NA	126737208	126723116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
Isoform_47985_8	chr14	+	2524	15	FSM	ENSMUSG00000022214.16	ENSMUST00000117236.8	2538	15	13	1	1	0	multi-exon	TRUE	canonical	3	9	junction_1	36.2303430166213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797475	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55797579_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47986_22	chr14	+	2676	15	FSM	ENSMUSG00000022214.16	ENSMUST00000152681.8	2624	15	-49	-3	3	0	multi-exon	FALSE	canonical	3	32	junction_2	36.5692661191033	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797941	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55798085_55798531_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47987_97	chr14	+	2666	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	27.5910366989435	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797974	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55798085_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47988_19	chr14	+	2506	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	39.769296432996	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797976	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55798085_55798666_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47989_58	chr14	+	2531	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	31.9189023390625	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797974	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55798085_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47990_10	chr14	+	2526	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	35.7694573852142	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGCTCTGTGTCTGTGT	NA	False	NA	8	True	AATAAA	-13	NA	55797948	55807516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55798085_55798692_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47991_10	chr14	+	2856	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	37.1563848991732	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	False	NA	14	True	AATAAA	-19	NA	55797976	55807522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55798276_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47992_8	chr14	+	2722	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	37.1563848991732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797974	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55798276_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47994_3	chr14	+	2986	15	FSM	ENSMUSG00000022214.16	ENSMUST00000072530.11	2601	15	-383	-2	12	0	multi-exon	FALSE	canonical	3	17	junction_1	34.3960278912243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55798002	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55798433_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47995_4	chr14	+	2613	15	FSM	ENSMUSG00000022214.16	ENSMUST00000072530.11	2601	15	-10	-2	-10	0	multi-exon	FALSE	canonical	3	17	junction_1	34.3960278912243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55798375	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55798433_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47996_9	chr14	+	2466	15	NIC	ENSMUSG00000022214.16	novel	2601	15	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	37.8544473433898	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGCTCTGTGTCTGTGT	NA	False	NA	8	True	AATAAA	-13	NA	55798382	55807516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55798433_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47997_18	chr14	+	2666	14	FSM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	-6	0	-6	0	multi-exon	FALSE	canonical	3	97	junction_1	16.6800735031656	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55798421	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_47999_11	chr14	+	3147	14	FSM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	-487	0	2	0	multi-exon	FALSE	canonical	3	97	junction_1	16.6800735031656	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797940	55807521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_4800_7	chr10	-	2057	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	9	-1023	9	1023	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATTGACAAAGCATCCT	NA	False	NA	NA	False	NA	NA	NA	126737208	126722094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
Isoform_48003_217	chr14	+	1004	11	FSM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	108	0	0	0	multi-exon	FALSE	canonical	1	117	junction_4	54.1775783881118	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	False	NA	14	True	AATAAA	-18	NA	55815924	55818985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
Isoform_48005_432	chr14	+	3421	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	42	22	6	1	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTGGTGGTCCTTCT	4216	False	NA	16	True	AATAAA	-19	NA	55829206	55841128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
Isoform_48009_20	chr14	+	3566	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	-101	20	-101	0	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGGTGGTCCTTCTTC	4073	False	NA	18	True	AATAAA	-21	NA	55829063	55841130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
Isoform_4801_3	chr10	-	2110	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	-44	-1023	-37	1023	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATTGACAAAGCATCCT	NA	False	NA	NA	False	NA	NA	NA	126737261	126722094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
Isoform_48010_8	chr14	+	4020	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	-555	20	-555	0	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGGTGGTCCTTCTTC	3619	False	NA	18	True	AATAAA	-21	NA	55828609	55841130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
Isoform_48012_33	chr14	+	3416	21	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	45.0271029492238	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGGTGGTCCTTCTT	4219	False	NA	17	True	AATAAA	-20	NA	55829209	55841129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832929_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
Isoform_48021_6	chr14	+	2306	10	FSM	ENSMUSG00000002325.16	ENSMUST00000134863.8	2959	10	653	0	239	0	multi-exon	TRUE	canonical	1	2	junction_1	18.2337361997608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	NA	False	NA	9	True	NA	NA	NA	55841680	55847487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55841701_55841924_55842011_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
Isoform_48022_37	chr14	+	2248	9	FSM	ENSMUSG00000002325.16	ENSMUST00000130697.8	2459	9	211	0	211	0	multi-exon	FALSE	canonical	3	21	junction_1	14.5086181285469	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	NA	False	NA	9	True	NA	NA	NA	55841652	55847487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
Isoform_48024_6	chr14	+	2225	9	ISM	ENSMUSG00000002325.16	ENSMUST00000134863.8	2959	10	958	0	-48	0	3prime_fragment	FALSE	canonical	3	18	junction_1	14.9994791576241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	NA	False	NA	9	True	NA	NA	NA	55841985	55847487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_55842011_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
Isoform_48028_3	chr14	+	2149	19	ISM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	128	3	128	-3	intron_retention	FALSE	canonical	3	23	junction_6	6.67337625323823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCCTCTTTTTTTT	1456	False	NA	6	True	ATTAAA	-18	NA	55855621	55862849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529
Isoform_48029_223	chr14	+	2095	20	FSM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	89	0	89	0	multi-exon	FALSE	canonical	3	23	junction_6	6.49738920505725	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTCTTTTTTTTTTT	1417	False	NA	9	True	ATTAAA	-21	NA	55855582	55862852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
Isoform_48030_6	chr14	+	2172	20	FSM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	9	3	9	-3	multi-exon	FALSE	canonical	3	23	junction_6	6.49738920505725	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCCTCTTTTTTTT	1337	False	NA	6	True	ATTAAA	-18	NA	55855502	55862849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
Isoform_48031_3	chr14	+	2362	17	NIC	ENSMUSG00000002324.9	novel	2184	20	NA	NA	95	0	intron_retention	FALSE	canonical	3	23	junction_4	6.37101591192488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTCTTTTTTTTTTT	1423	False	NA	9	True	ATTAAA	-21	NA	55855588	55862852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55855811_55856002_55856116_55856198_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
Isoform_48033_82	chr14	+	1480	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	54	459	31	425	multi-exon	TRUE	canonical	3	97	junction_1	15.6828127988557	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTTAGACGTTCTTC	NA	False	NA	18	True	ATTAAA	-19	NA	55909745	55916198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
Isoform_48036_14	chr14	+	1478	10	NIC	ENSMUSG00000002326.7	novel	773	7	NA	NA	17	426	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	39.4658783705058	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTAGACGTTCTTCT	NA	False	NA	19	True	ATTAAA	-20	NA	55909856	55916199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55909950_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
Isoform_48037_535	chr14	+	2253	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	3	1438	3	-1438	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTATTTTATTTTT	NA	False	NA	25	True	NA	NA	NA	55983152	55991519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
Isoform_48038_1382	chr14	+	2228	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	28	1438	28	-1438	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTATTTTATTTTT	NA	False	NA	25	True	NA	NA	NA	55983177	55991519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
Isoform_4805_1582	chr10	-	1160	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	37	9	0	-9	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGTGCTTAATGTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	126866672	126858209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
Isoform_48057_10	chr14	+	3765	10	NNC	ENSMUSG00000023411.13	novel	3267	10	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	13.7688142885864	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56062477	56071400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56070413_56070440
Isoform_48058_10	chr14	+	3901	10	NNC	ENSMUSG00000023411.13	novel	3775	9	NA	NA	88	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	13.7688142885864	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGGCTCCAGAGCTC	NA	False	NA	16	True	AATAAA	-16	NA	56062339	56071398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56070413_56070440
Isoform_4806_216	chr10	-	1192	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	3	11	3	-11	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATAGTGCTTAATGTG	NA	False	NA	-14	True	AATAAA	-13	NA	126866706	126858211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
Isoform_48061_8	chr14	+	3224	10	FSM	ENSMUSG00000023411.13	ENSMUST00000024179.6	3267	10	43	0	43	0	multi-exon	FALSE	canonical	3	26	junction_9	7.13537527022325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56062294	56071400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56070262_56071013
Isoform_48062_4	chr14	+	1970	4	NNC	ENSMUSG00000023411.13	novel	2217	4	NA	NA	1289	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.2868320729373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAGGCTCCAGAGCTCT	NA	False	NA	17	True	AATAAA	-17	NA	56069014	56071399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_56069166_56069404_56069532_56069679_56070413_56070440
Isoform_48063_3	chr14	+	1891	3	FSM	ENSMUSG00000023411.13	ENSMUST00000226293.2	2969	3	1395	-317	1395	0	multi-exon	FALSE	canonical	3	42	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGGCTCCAGAGCTC	NA	False	NA	16	True	AATAAA	-16	NA	56069120	56071398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_56069166_56069404_56069532_56069679
Isoform_48065_43	chr14	+	7335	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	175	1	156	-1	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATGTTTAATTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	56091648	56112192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
Isoform_48067_24	chr14	+	7372	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	138	1	119	-1	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATGTTTAATTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	56091611	56112192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
Isoform_48069_5	chr14	+	7503	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	8	0	8	0	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTAATTTTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	56091481	56112193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
Isoform_48075_5	chr14	+	2646	4	ISM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	13	7950	13	-7604	intron_retention	FALSE	canonical	3	63	junction_2	8.64098759787715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAAAAGAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	56122416	56126288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170
Isoform_48081_37	chr14	+	5891	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	3	-1996	3	2	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGGCTACTACTCAT	NA	False	NA	8	True	NA	NA	NA	56122406	56136234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
Isoform_48086_6	chr14	+	6370	7	NIC	ENSMUSG00000047153.5	novel	4075	8	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	67	junction_6	6.15539510420646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTATGGTGGCTACTAC	NA	False	NA	4	True	NA	NA	NA	56122423	56136230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_56122600_56123230_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
Isoform_48088_18	chr14	+	4027	23	FSM	ENSMUSG00000022229.4	ENSMUST00000007340.4	3950	23	-76	-1	-76	1	multi-exon	FALSE	canonical	2	6	junction_18	2.50989776223246	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTGTCATTGTGGCAT	NA	False	NA	6	True	AGTAAA	-15	NA	56602448	56626008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
Isoform_48094_9	chr14	+	1652	11	FSM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-39	-4	-36	4	multi-exon	TRUE	canonical	3	453	junction_4	33.16700167335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCCTCTTGCTTGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	56640117	56679374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987
Isoform_48098_39	chr14	+	4130	25	ISM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	99	37223	-17	743	5prime_fragment	FALSE	canonical	3	349	junction_12	56.9559862964377	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAAGCACATTTG	NA	False	NA	NA	False	NA	NA	NA	56640136	56725266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
Isoform_4810_41	chr10	-	1379	7	Fusion	ENSMUSG00000080115.4_ENSMUSG00000040521.12	novel	1206	6	NA	NA	-362	-11	multi-exon	FALSE	canonical	3	15	junction_6	461.08811522311	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATAGTGCTTAATGTG	NA	False	NA	-14	True	AATAAA	-13	NA	126877744	126858211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126876856_126876969_126877575
Isoform_48100_677	chr14	+	3523	26	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	349	junction_12	57.9852946875326	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640136	56726892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
Isoform_48107_12	chr14	+	3433	25	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	112.817699556999	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640136	56726892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
Isoform_48110_36	chr14	+	3411	25	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	115.170043365837	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640136	56726892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
Isoform_48116_3	chr14	+	3871	32	ISM	ENSMUSG00000054509.8	ENSMUST00000161553.2	6387	35	5	12566	5	-12564	5prime_fragment	FALSE	canonical	2	8	junction_14	4.30932005472175	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAAATAAAGACT	1092	False	NA	NA	False	NA	NA	NA	56813080	56884685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_56813188_56821615_56821749_56823013_56823210_56825205_56825270_56825875_56825952_56827335_56827438_56827820_56827971_56829747_56829886_56830680_56830855_56832710_56832872_56835032_56835171_56835788_56835885_56839720_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56873183_56873280_56875304_56875428_56878711_56878775_56884630
Isoform_48125_593	chr14	+	2911	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	25	3	25	0	multi-exon	FALSE	canonical	3	627	junction_4	88.7108193370776	593	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1803	False	NA	29	True	ATTAAA	-15	NA	56905729	56934884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
Isoform_48140_5	chr14	+	4834	26	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	47.0193832371289	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGGGTTTTTTGTTTG	NA	False	NA	16	True	AATAAA	-12	NA	57124043	57197804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57182142_57182221_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_48141_3	chr14	+	6845	26	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-343	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	47.0193832371289	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCAGTCTTTTTTTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	57124043	57199815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57182142_57182221_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_48142_49	chr14	+	4948	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	187	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTTCTGCATCAC	NA	False	NA	26	True	ATTAAA	-20	NA	57124043	57197996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_48143_73	chr14	+	4758	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-3	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGGTTTTTTGTTTGTT	NA	False	NA	18	True	AATAAA	-14	NA	57124043	57197806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_48144_13	chr14	+	6798	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-97	-343	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCAGTCTTTTTTTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	57124012	57199815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_48146_19	chr14	+	4977	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-98	184	combination_of_known_junctions	TRUE	canonical	2	100	junction_12	26.7082683306541	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGACTTTCTGCAT	NA	False	NA	23	True	ATTAAA	-17	NA	57124011	57197993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_48147_36	chr14	+	6767	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-343	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCAGTCTTTTTTTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	57124043	57199815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_4815_4	chr10	-	2044	4	FSM	ENSMUSG00000040502.6	ENSMUST00000040307.6	3037	4	-45	1038	-45	-1038	multi-exon	TRUE	canonical	3	10	junction_3	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCCTCCTTTCTCATC	9874	False	NA	0	True	CATAAA	-18	NA	126896098	126891917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126892781_126893300_126893494_126894088_126894245_126895266
Isoform_48150_3	chr14	+	3131	26	NIC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	6	-1	combination_of_known_junctions	TRUE	canonical	1	1	junction_3	13.7506945279139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCTGAGGCTAATGACTT	NA	False	NA	12	True	AATAAA	-14	NA	57661524	57755392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_57661645_57667994_57668091_57672251_57672315_57674633_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
Isoform_48151_54	chr14	+	3073	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	15	0	-3	0	multi-exon	FALSE	canonical	3	32	junction_12	10.0195009855781	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	13	True	AATAAA	-15	NA	57661533	57755393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
Isoform_48153_9	chr14	+	1280	3	FSM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	-6	0	-6	0	multi-exon	FALSE	canonical	3	15	junction_1	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAAGCCACTGGTCT	NA	False	NA	10	True	ATTAAA	-22	NA	57762227	57780623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_57762379_57762760_57763057_57779790
Isoform_48154_3	chr14	+	1332	3	FSM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	-61	3	-61	-3	multi-exon	FALSE	canonical	3	15	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTGAAAGCCACTGG	NA	False	NA	7	True	ATTAAA	-19	NA	57762172	57780620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_57762379_57762760_57763057_57779790
Isoform_48157_16	chr14	+	1302	2	ISM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	360	-6	360	6	3prime_fragment	FALSE	canonical	3	29	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCACTGGTCTTAATTT	NA	False	NA	16	True	ATTAAA	-28	NA	57762593	57780629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_57763057_57779790
Isoform_48159_60	chr14	+	1909	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	38	3178	0	1125	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	58035674	58040917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
Isoform_48161_655	chr14	+	602	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	38	4485	0	6	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCCATTAAGCCTTTAA	NA	False	NA	NA	False	AATAAA	-27	NA	58035674	58039610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
Isoform_48162_336	chr14	+	781	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	37	4307	-1	4	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGTGTAAAAGTTAATG	NA	False	NA	0	True	TATAAA	-32	NA	58035673	58039788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
Isoform_48164_38	chr14	+	688	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	-50	4487	-50	4	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGCCATTAAGCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	58035586	58039608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
Isoform_48173_530	chr14	+	513	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	17	2347	17	1	multi-exon	FALSE	canonical	3	956	junction_1	0	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGTCTCATACGGAAT	NA	False	NA	26	True	ATTAAA	-18	NA	58063707	58064406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_58063780_58063965
Isoform_48174_29	chr14	+	547	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	-17	2347	-17	1	multi-exon	FALSE	canonical	3	956	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGTCTCATACGGAAT	NA	False	NA	26	True	ATTAAA	-18	NA	58063673	58064406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_58063780_58063965
Isoform_48176_19	chr14	+	3612	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	90.3297906251319	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTACAGTTGTGGTTGTT	NA	False	NA	8	True	AATAAA	-18	NA	59438689	59474716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_59438754_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_4818_977	chr10	-	1542	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	5	9	2	-9	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	977	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGTCTTGTCTTGT	NA	False	NA	-9	True	AATAAA	-6	NA	126906128	126903157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
Isoform_48192_71	chr14	+	3936	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	-33	0	-14	0	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438643	59474714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_48193_401	chr14	+	3849	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	54	0	40	0	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438730	59474714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_48200_11	chr14	+	4089	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	-183	-3	-164	3	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACAGTTGTGGTTGTTT	NA	False	NA	9	True	AATAAA	-19	NA	59438493	59474717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_48203_87	chr14	+	3888	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	78.7866666573425	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438688	59474714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_48207_12	chr14	+	3804	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	92.2668605389769	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438683	59474714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_59439034_59447465_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_48216_315	chr14	+	3038	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	0	-1	0	1	multi-exon	FALSE	canonical	3	224	junction_1	43.2892596379287	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTCATTCCTCTT	NA	False	NA	6	True	AATAAA	-13	NA	59678429	59786353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
Isoform_48222_18	chr14	+	3040	11	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	93.0002150535148	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGTCTCATTCCTC	NA	False	NA	4	True	AATAAA	-11	NA	59678429	59786351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_59678472_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
Isoform_48228_183	chr14	+	3112	2	FSM	ENSMUSG00000044461.7	ENSMUST00000053949.7	3119	2	6	1	6	-1	multi-exon	TRUE	canonical	3	42	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCGGGGAATGCTTAT	NA	False	NA	4	True	AATAAA	-16	NA	59862762	59869108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_59863850_59867083
Isoform_48232_190	chr14	+	3751	14	FSM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	58	4	13	-4	multi-exon	FALSE	canonical	3	64	junction_3	13.0256915000032	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTTTGAGTGTTTTTC	NA	False	NA	5	True	ATTAAA	-9	NA	60502734	60539815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
Isoform_48235_3	chr14	+	7812	14	NIC	ENSMUSG00000021990.17	novel	7517	13	NA	NA	-49	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.61064077809553	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTAGTGATGCATCTC	NA	False	NA	8	True	ATTAAA	-16	NA	60872128	61002002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_60872314_60873816_60874096_60928302_60929998_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
Isoform_48236_7	chr14	+	5821	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	3.46648653907957	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGTTCTAGTGATGCAT	NA	False	NA	5	True	ATTAAA	-13	NA	60940400	61001999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_60940572_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
Isoform_48238_6	chr14	+	5848	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	4.14010819517662	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGGTTCTAGTGATGC	NA	False	NA	3	True	ATTAAA	-11	NA	60940401	61001997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_60940572_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
Isoform_48241_758	chr14	+	2396	19	FSM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	3	616	3	-616	multi-exon	FALSE	canonical	3	187	junction_10	24.3726850752595	758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCTCACCTGCTTGGC	NA	False	NA	NA	False	AATAAA	-20	NA	61022024	61141062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
Isoform_48251_4	chr14	+	15205	9	NIC	ENSMUSG00000048279.20	novel	4581	8	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	3.93700393700591	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGACTGGTTATTT	NA	False	NA	14	True	AATAAA	-17	NA	61410429	61452945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_61410665_61410746_61410898_61416670_61416759_61418393_61418480_61421400_61421513_61427050_61427198_61428546_61430042_61430836_61430929_61440146
Isoform_48252_3	chr14	+	1484	2	FSM	ENSMUSG00000043157.9	ENSMUST00000055159.8	1482	2	-2	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGCATGCATGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	61547199	61549385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_61547387_61548088
Isoform_48253_77	chr14	+	1632	3	FSM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	-15	2	-15	-2	multi-exon	FALSE	canonical	3	46	junction_1	100	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGAGTTTGTGCTG	NA	False	NA	16	True	AATAAA	-14	NA	61835680	61843393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_61835796_61837242_61837345_61841978
Isoform_48255_67	chr14	+	1547	3	FSM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	1	2	1	-2	multi-exon	FALSE	canonical	3	148	junction_1	49	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGAGTTTGTGCTG	NA	False	NA	16	True	AATAAA	-14	NA	61836989	61843393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_61837020_61837242_61837345_61841978
Isoform_48256_102	chr14	+	1519	2	ISM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	252	2	252	-2	3prime_fragment	FALSE	canonical	3	246	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGAGTTTGTGCTG	NA	False	NA	16	True	AATAAA	-14	NA	61837240	61843393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_61837345_61841978
Isoform_48263_353	chr14	+	980	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	25	489	25	-489	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAAACTTGCCTCTTGC	NA	False	NA	7	True	AATAAA	-16	NA	62569541	62609952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_48264_40	chr14	+	1401	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	25	68	25	-68	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCCCTTTCCATTATG	NA	False	NA	21	True	AATAAA	-23	NA	62569541	62610373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_48265_39	chr14	+	1470	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	26	-2	26	2	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATAGTTTTGTTGCTTT	NA	False	NA	7	True	AATAAA	-19	NA	62569542	62610443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_48266_9	chr14	+	1004	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	1	489	1	-489	multi-exon	TRUE	canonical	3	538	junction_2	112.951139879153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAAACTTGCCTCTTGC	NA	False	NA	7	True	AATAAA	-16	NA	62569517	62609952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_48271_138	chr14	+	872	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-489	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAAACTTGCCTCTTGC	NA	False	NA	7	True	AATAAA	-16	NA	62569541	62609952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_48273_22	chr14	+	1362	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	26	2	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATAGTTTTGTTGCTTT	NA	False	NA	7	True	AATAAA	-19	NA	62569542	62610443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_48278_5	chr14	+	2394	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	14	4238	14	-4238	multi-exon	FALSE	canonical	3	23	junction_9	5.80111132128866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTTAGTTTCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	63075140	63194720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
Isoform_48282_35	chr14	+	6603	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	41	2	5	-2	multi-exon	FALSE	canonical	3	23	junction_9	5.80111132128866	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCAGTTGTATCCTTGT	NA	False	NA	20	True	AATAAA	-20	NA	63075167	63198956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
Isoform_48283_10	chr14	+	650	3	FSM	ENSMUSG00000054763.10	ENSMUST00000067990.8	618	3	-41	9	-41	-9	multi-exon	FALSE	canonical	3	33	junction_1	3	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATAAATTTCCCGTTTC	NA	False	NA	19	True	AATAAA	-28	NA	63284398	63286050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_63284500_63284892_63285068_63285676
Isoform_48289_11735	chr14	+	1900	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	55	2788	3	1272	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	11735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCAGGGTGCACGGTT	NA	False	NA	26	True	AATAAA	-21	NA	63359965	63380584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
Isoform_4829_255	chr10	-	2629	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	-1	-1	-1	1	multi-exon	FALSE	canonical	3	78	junction_3	48.7011398265807	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCAGGCTCTGTGGGG	NA	False	NA	-3	True	AATAAA	-15	NA	126957001	126931519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
Isoform_48290_291	chr14	+	1974	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	0	2769	0	1291	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTGCAGTTTCAAGG	NA	False	NA	-14	True	AATAAA	-40	NA	63359910	63380603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
Isoform_48292_152	chr14	+	4685	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	55	3	3	-3	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTTCCTGTCATC	NA	False	NA	NA	False	ATTAAA	-15	NA	63359965	63383369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
Isoform_48293_325	chr14	+	3512	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	55	1176	3	-1176	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGAACTTGGGGTCTTA	NA	False	NA	9	True	TATAAA	-19	NA	63359965	63382196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
Isoform_48317_7	chr14	+	4144	4	FSM	ENSMUSG00000035095.12	ENSMUST00000121288.2	4231	4	81	6	66	-6	multi-exon	FALSE	canonical	2	3	junction_1	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAGATATCCAAATAGA	NA	False	NA	NA	False	AATAAA	-10	NA	63673923	63702941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_63674082_63679361_63679463_63689319_63690089_63699825
Isoform_48318_8	chr14	+	4613	3	FSM	ENSMUSG00000035067.10	ENSMUST00000176510.2	4315	3	-303	5	-131	-5	multi-exon	FALSE	canonical	2	12	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACACTTGAAATTTTTT	8723	False	NA	13	True	AATAAA	-26	NA	63843820	63903626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_63844734_63898268_63898376_63900033
Isoform_48321_83	chr14	+	1334	7	FSM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	-41	2	-41	-2	multi-exon	FALSE	canonical	3	56	junction_4	11.9443152447793	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTGAGCCTTTCACAT	4046	False	NA	NA	False	AATAAA	-37	NA	64097771	64157302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
Isoform_48323_3	chr14	+	1243	6	NIC	ENSMUSG00000021958.6	novel	1295	7	NA	NA	-43	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	33.5440009539709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTGAGCCTTTCACAT	4044	False	NA	NA	False	AATAAA	-37	NA	64097769	64157302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64115560_64115638_64156545
Isoform_48324_12	chr14	+	3413	2	FSM	ENSMUSG00000063060.7	ENSMUST00000079652.7	3299	2	-114	0	-114	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTCTATCCTTTGAAAT	4569	False	NA	NA	False	AATAAA	-16	NA	64181007	64188181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_64181443_64185203
Isoform_48326_5	chr14	+	686	2	FSM	ENSMUSG00000060012.10	ENSMUST00000224507.2	3045	2	2	2357	2	-2357	multi-exon	FALSE	canonical	3	66	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAGAGAAAGAGGGGA	NA	False	NA	NA	False	AATATA	-4	NA	64889992	64907645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_64890106_64907072
Isoform_4833_524	chr10	-	2475	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	-18	1	-12	1	multi-exon	FALSE	canonical	3	172	junction_9	22.2351605990131	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCAGGCTCTGTGGGG	NA	False	NA	-3	True	AATAAA	-15	NA	126957012	126931519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
Isoform_48331_3	chr14	+	6200	40	FSM	ENSMUSG00000060012.10	ENSMUST00000224503.2	8865	40	-72	2737	-1	584	multi-exon	TRUE	canonical	2	39	junction_37	14.1361837027482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAATTTATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	64889978	65044329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_64890106_64907072_64907167_64945940_64945954_64951522_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
Isoform_48332_14	chr14	+	8858	39	NIC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	40	junction_3	13.4687490961881	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCCGAGGTCAAGCATA	NA	False	NA	9	True	AATAAA	-19	NA	64889993	65047065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_64890106_64907072_64907167_64945940_64945954_64951522_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65040422_65041180_65043479
Isoform_48333_3	chr14	+	8857	38	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.6727797096584	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCCGAGGTCAAGCATA	NA	False	NA	9	True	AATAAA	-19	NA	64889980	65047065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_64890106_64907072_64907167_64951522_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998250_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65040422_65041180_65043479
Isoform_48338_458	chr14	+	2407	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	264	3	-4	-3	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCCCAGTTCTATTGC	NA	False	NA	14	True	AATAAA	-14	NA	65187757	65277278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
Isoform_48340_27	chr14	+	2671	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	0	3	0	-3	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCCCAGTTCTATTGC	NA	False	NA	14	True	AATAAA	-14	NA	65187493	65277278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
Isoform_48342_8	chr14	+	2728	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	-57	3	-57	-3	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCCCAGTTCTATTGC	NA	False	NA	14	True	AATAAA	-14	NA	65187436	65277278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
Isoform_48345_13	chr14	+	1243	8	FSM	ENSMUSG00000034532.10	ENSMUST00000224629.2	3781	8	69	2469	32	1	multi-exon	FALSE	canonical	2	16	junction_5	3.88087934491604	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGTGAAAGGTCCTG	2607	False	NA	NA	False	ATTAAA	-18	NA	65504135	65558951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_65504233_65508148_65508285_65524580_65524617_65531232_65531440_65532841_65533007_65536634_65536865_65540548_65540652_65558682
Isoform_48348_36	chr14	+	4225	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	29.0282620905903	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGTGTGTGCCTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	65596093	65636378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65634339_65634372
Isoform_48350_31	chr14	+	4302	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	29.0282620905903	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTGCCTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	65596017	65636379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65634339_65634372
Isoform_48351_10	chr14	+	4395	10	FSM	ENSMUSG00000034522.11	ENSMUST00000066994.7	4229	10	-167	1	-25	-1	multi-exon	FALSE	canonical	3	41	junction_1	17.4171761399877	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGTGTGTGCCTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	65595957	65636378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
Isoform_48353_40	chr14	+	4240	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	28.8229075563171	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTGCCTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	65596076	65636379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_65596205_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65634339_65634372
Isoform_48354_10	chr14	+	4260	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-63	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	28.8229075563171	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTGCCTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	65596061	65636379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_65596205_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65634351_65634379
Isoform_48357_3	chr14	+	2316	10	NIC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	34	162	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	16.9297750708808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTCTTTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	65596016	65634361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_65596205_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
Isoform_48358_20	chr14	+	4384	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	28.8229075563171	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTGCCTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	65595932	65636379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_65596205_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65634339_65634372
Isoform_48359_106	chr14	+	3786	9	FSM	ENSMUSG00000022032.15	ENSMUST00000022610.15	3794	9	2	6	2	-6	multi-exon	FALSE	canonical	3	27	junction_2	7.61474720525902	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGTTGCTGATAAGT	820	False	NA	NA	False	AATAAA	-13	NA	65903853	66002269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_65904196_65908005_65908124_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
Isoform_48360_4	chr14	+	3083	8	NIC	ENSMUSG00000022032.15	novel	3794	9	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.7829667938676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGATAAGTGGTCCA	854	False	NA	NA	False	AATAAA	-19	NA	65903887	66002275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_65904196_65908005_65908124_65927216_65927346_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
Isoform_48361_11	chr14	+	3555	8	NIC	ENSMUSG00000022032.15	novel	3179	8	NA	NA	58	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	14.8172541453592	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCTGATAAGTGGTCC	NA	False	NA	NA	False	AATAAA	-18	NA	65913983	66002274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_65914208_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
Isoform_48364_591	chr14	+	1666	8	FSM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	52	2	-48	-2	multi-exon	FALSE	canonical	3	729	junction_5	59.6342594316319	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCAGCATTATCTGTTT	NA	False	NA	23	True	AATAAA	-39	NA	66043337	66055269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
Isoform_48368_102	chr14	+	1489	8	NIC	ENSMUSG00000022033.10	novel	451	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	250.309767272148	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	False	NA	25	True	AATAAA	-41	NA	66043684	66055271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_66043752_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
Isoform_48373_302	chr14	+	2167	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	61	2	3	-2	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCATTGATATCTGAAT	NA	False	NA	29	True	AATAAA	-18	NA	66074811	66104054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
Isoform_48375_11	chr14	+	4039	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	61	-1870	3	1870	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGATTCCGTGTCTATC	NA	False	NA	NA	False	GATAAA	-17	NA	66074811	66105926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
Isoform_48376_17	chr14	+	2224	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	2	4	2	-4	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGGCATTGATATCTGA	NA	False	NA	27	True	AATAAA	-16	NA	66074752	66104052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
Isoform_48377_4	chr14	+	4183	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	57	-2010	-1	2010	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATTTCCTTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	66074807	66106066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
Isoform_48379_7	chr14	+	2206	9	NNC	ENSMUSG00000022035.7	novel	2230	9	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	82.8996946616814	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGGCATTGATATCTGA	NA	False	NA	27	True	AATAAA	-16	NA	66074810	66104052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_66074934_66077896_66077985_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
Isoform_4838_36	chr10	-	2497	15	FSM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	-21	-1	-21	0	multi-exon	FALSE	canonical	3	18	junction_9	9.18628080901302	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTTGTTGTCTTGGGA	6163	False	NA	-3	True	AATAAA	-16	NA	127024662	127018393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
Isoform_48380_6	chr14	+	2123	8	NIC	ENSMUSG00000022035.7	novel	2230	9	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	86.3017960415657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGCATTGATATCTGAA	NA	False	NA	28	True	AATAAA	-17	NA	66074806	66104053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_66074934_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
Isoform_48382_29	chr14	+	1645	9	FSM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	161	4	2	-4	multi-exon	FALSE	canonical	3	13	junction_1	2.72717802865893	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTCCCTTGGGTCTGTTT	NA	False	NA	9	True	AATAAA	-16	NA	66206092	66218992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_66206138_66209180_66209302_66210773_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
Isoform_48383_5	chr14	+	1785	9	FSM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	19	6	19	-6	multi-exon	TRUE	canonical	3	13	junction_1	2.72717802865893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTCCCTTGGGTCTGT	NA	False	NA	7	True	AATAAA	-14	NA	66205950	66218990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_66206138_66209180_66209302_66210773_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
Isoform_48385_616	chr14	+	3636	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	37	5	2	-5	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTGAGTTGTTTTTTA	NA	False	NA	26	True	NA	NA	NA	66534516	66548868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
Isoform_48398_17	chr14	+	4565	3	FSM	ENSMUSG00000046204.15	ENSMUST00000089236.11	5518	3	-15	968	-15	-968	multi-exon	FALSE	canonical	3	15	junction_1	6.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGAGTTGTTTTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	67148603	67157504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_67148743_67152770_67152900_67153207
Isoform_48399_18	chr14	+	4482	3	FSM	ENSMUSG00000046204.15	ENSMUST00000089236.11	5518	3	67	969	-5	-969	multi-exon	FALSE	canonical	3	15	junction_1	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGTGAGTTGTTTTCTG	NA	False	NA	13	True	AATAAA	-13	NA	67148685	67157503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_67148743_67152770_67152900_67153207
Isoform_48400_7	chr14	+	3034	12	NIC	ENSMUSG00000034327.18	novel	2528	11	NA	NA	5	-1	intron_retention	FALSE	canonical	3	8	junction_4	38.6107936778015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	9	True	AATAAA	-21	NA	67953593	67979609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_67953631_67962006_67962129_67963775_67963820_67966098_67966196_67966672_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
Isoform_48401_12	chr14	+	2901	12	NIC	ENSMUSG00000034327.18	novel	3157	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	33.5164940275803	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	9	True	AATAAA	-21	NA	67953599	67979609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_67953631_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
Isoform_48402_5	chr14	+	2747	11	NIC	ENSMUSG00000034327.18	novel	3157	11	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	37.6256561404582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	9	True	AATAAA	-21	NA	67953603	67979609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_67953631_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
Isoform_48404_3	chr14	+	3051	12	FSM	ENSMUSG00000034327.18	ENSMUST00000156700.2	3098	12	44	3	44	-3	multi-exon	FALSE	canonical	3	8	junction_4	31.9689932422906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGCCTGTTTCTGCTCTT	NA	False	NA	7	True	AATAAA	-19	NA	67953777	67979607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966672_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
Isoform_48406_86	chr14	+	2991	12	FSM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	2	-1691	2	-1	multi-exon	FALSE	canonical	3	52	junction_9	22.4881970879051	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	9	True	AATAAA	-21	NA	67953712	67979609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
Isoform_4841_9	chr10	-	2268	16	FSM	ENSMUSG00000019467.16	ENSMUST00000019611.15	2218	16	-46	-4	18	0	multi-exon	FALSE	canonical	1	3	junction_14	11.8291541916102	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTTGTTGTCTTGGGA	4891	False	NA	-3	True	AATAAA	-16	NA	127025934	127018393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127025363_127025479_127025735
Isoform_48411_47	chr14	+	2841	11	FSM	ENSMUSG00000034327.18	ENSMUST00000078053.13	3157	11	166	150	2	-1	multi-exon	FALSE	canonical	3	27	junction_8	27.0325729445053	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	9	True	AATAAA	-21	NA	67953712	67979609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
Isoform_48412_10	chr14	+	2931	11	FSM	ENSMUSG00000034327.18	ENSMUST00000078053.13	3157	11	75	151	22	-2	multi-exon	FALSE	canonical	3	27	junction_8	27.0325729445053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCCTGTTTCTGCTCTTG	NA	False	NA	8	True	AATAAA	-20	NA	67953621	67979608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
Isoform_48415_290	chr14	+	2173	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	1	1206	1	-1206	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGCTGTGGTTTTTA	NA	False	NA	13	True	AATAAA	-27	NA	68321312	68325338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
Isoform_48416_108	chr14	+	3370	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	1	9	1	-9	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCAATGGGTGTGCAG	NA	False	NA	3	True	AATAAA	-17	NA	68321312	68326535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
Isoform_48418_30	chr14	+	3415	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	-42	7	-42	-7	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAATGGGTGTGCAGTC	NA	False	NA	5	True	AATAAA	-19	NA	68321269	68326537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
Isoform_48421_56	chr14	+	2216	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	-42	1206	-42	-1206	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGCTGTGGTTTTTA	NA	False	NA	13	True	AATAAA	-27	NA	68321269	68325338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
Isoform_48428_3	chr14	+	2052	8	ISM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	-18	9185	-18	7752	5prime_fragment	FALSE	canonical	3	166	junction_5	13.6561266806649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAGAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69792854	69813784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693
Isoform_48429_133	chr14	+	3024	13	FSM	ENSMUSG00000095463.9	ENSMUST00000184973.8	3589	13	-22	587	-22	467	multi-exon	FALSE	canonical	3	82	junction_8	36.1504379872038	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGACTTGACATTTTAA	7279	False	NA	NA	False	AATAAA	-13	NA	69574600	69604132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594599_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
Isoform_4843_8	chr10	-	2623	14	NIC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	-34	0	intron_retention	FALSE	canonical	3	18	junction_8	9.21922354866377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6150	False	NA	-4	True	AATAAA	-15	NA	127024675	127018394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
Isoform_48433_6	chr14	+	2170	13	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	-13	-354	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7614711414806	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGCTGTCTGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	69792859	69821561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
Isoform_48435_5	chr14	+	2964	13	FSM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	42	583	0	471	multi-exon	FALSE	canonical	3	83	junction_8	35.9663229826026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTGACATTTTAAACAG	NA	False	NA	NA	False	AATAAA	-17	NA	69792914	69822386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812849_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
Isoform_48436_3	chr14	+	2216	13	FSM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	-36	1409	-36	-355	multi-exon	FALSE	canonical	3	83	junction_8	35.9663229826026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTGCTGTCTGGAGGG	NA	False	NA	NA	False	NA	NA	NA	69792836	69821560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812849_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
Isoform_48438_211	chr14	+	3000	13	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-22	467	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7096334974091	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGACTTGACATTTTAA	7279	False	NA	NA	False	AATAAA	-13	NA	69574600	69604132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
Isoform_48440_6	chr14	+	3092	14	FSM	ENSMUSG00000034205.17	ENSMUST00000022660.14	5316	14	95	2129	95	7	multi-exon	FALSE	canonical	0	0	junction_1	1.66410058867569	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTTGTTTTGTTT	6132	False	NA	NA	False	NA	NA	NA	69846611	69931154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_69846744_69871332_69871740_69882144_69882321_69898087_69898300_69901348_69901572_69904715_69904900_69910830_69910983_69913124_69913293_69915261_69915425_69919543_69919788_69926476_69926593_69927582_69927720_69929762_69929875_69930488
Isoform_48441_18	chr14	+	1849	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	13	1317	0	420	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCCACTGCTGTTTAC	NA	False	NA	NA	False	AATAAA	-29	NA	70004933	70020543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
Isoform_48445_15	chr14	+	3165	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	6	8	6	-8	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAGCAGTGTACG	NA	False	NA	-4	True	NA	NA	NA	70004926	70021852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
Isoform_48448_84	chr14	+	1509	9	FSM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	10	248	-8	-248	multi-exon	FALSE	canonical	3	54	junction_3	8.98523093748847	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAGTGTACTTTAAC	NA	False	NA	NA	False	AGTAAA	-12	NA	70337563	70375407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
Isoform_4845_7	chr10	-	1800	6	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	47.7811678383859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031595	127026246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127031562
Isoform_48451_3	chr14	+	1463	8	NIC	ENSMUSG00000022089.10	novel	1767	9	NA	NA	-5	-250	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	26.9602882561953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACAACAGTGTACTTTA	NA	False	NA	NA	False	AGTAAA	-10	NA	70337566	70375405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_70337646_70356052_70356102_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
Isoform_48452_5	chr14	+	2850	5	FSM	ENSMUSG00000003469.10	ENSMUST00000003561.10	2838	5	-21	9	-21	-9	multi-exon	FALSE	canonical	1	1	junction_1	2.17944947177034	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCGTCTGTCTTGGTCC	NA	False	NA	4	True	AATAAA	-16	NA	70694894	70706263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_70695244_70699178_70699364_70700679_70700855_70702889_70703008_70704240
Isoform_48453_79	chr14	+	1663	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	-98	0	5	0	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6469	False	NA	30	True	AATAAA	-26	NA	70782695	70786373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
Isoform_48454_257	chr14	+	1604	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	-39	0	-39	0	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6528	False	NA	30	True	AATAAA	-26	NA	70782754	70786373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
Isoform_48455_18	chr14	+	1709	7	FSM	ENSMUSG00000033589.5	ENSMUST00000226563.2	1444	7	68	-333	-35	1	multi-exon	FALSE	canonical	3	251	junction_2	32.9313258497471	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTCTTCACATCTCA	6532	False	NA	31	True	AATAAA	-27	NA	70782758	70786374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_70783179_70783916_70783990_70784369_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
Isoform_48459_4	chr14	+	3029	4	NIC	ENSMUSG00000033589.5	novel	1565	8	NA	NA	-41	-13	intron_retention	FALSE	canonical	3	251	junction_1	37.5854581808798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCTCCTAATTTGT	6526	False	NA	17	True	AATAAA	-13	NA	70782752	70786360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_70783990_70784369_70785516_70785624_70785780_70785869
Isoform_4846_40	chr10	-	1961	6	FSM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	-19	2	0	-2	multi-exon	FALSE	canonical	3	43	junction_1	37.9705148766777	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031597	127026248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
Isoform_48461_30	chr14	+	2865	12	ISM	ENSMUSG00000022096.15	ENSMUST00000163060.2	5278	18	7598	3	7598	-3	3prime_fragment	FALSE	canonical	2	7	junction_11	3.66804381851491	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAACATCTGTTCCGAG	NA	False	NA	NA	False	AATAAA	-14	NA	70800937	70810981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_70801123_70802741_70802824_70803468_70803633_70803749_70803987_70804219_70804386_70804588_70804659_70804941_70805073_70805215_70805336_70805416_70805533_70808817_70808983_70809347_70809477_70809681
Isoform_48462_10	chr14	+	2744	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	217	965	7	-965	multi-exon	FALSE	canonical	3	39	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGAGTGCTGTGGGTT	NA	False	NA	NA	False	AATGAA	-16	NA	70815293	70819046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_70815551_70816351_70816566_70816773
Isoform_48463_39	chr14	+	1418	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	217	2291	7	-1	multi-exon	FALSE	canonical	3	39	junction_1	3	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCTGCTTGCCTAAAT	NA	False	NA	NA	False	AGTAAA	-14	NA	70815293	70817720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_70815551_70816351_70816566_70816773
Isoform_48464_6	chr14	+	1718	5	NIC	ENSMUSG00000022102.14	novel	404	3	NA	NA	-37	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	2.38484800354236	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTGTGGCCTGTAATG	NA	False	NA	NA	False	ATTAAA	-15	NA	71010674	71015934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_71010805_71012905_71013188_71013423_71013512_71014255_71014438_71014898
Isoform_48465_3	chr14	+	2187	16	FSM	ENSMUSG00000022106.15	ENSMUST00000169513.8	3622	16	-100	1535	7	1	multi-exon	FALSE	canonical	1	2	junction_5	12.7774106227444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCCATTGACGAACA	NA	False	NA	NA	False	NA	NA	NA	73380438	73420123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73395827_73395886_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
Isoform_48466_3	chr14	+	2032	16	FSM	ENSMUSG00000022106.15	ENSMUST00000169513.8	3622	16	55	1535	-3	1	multi-exon	FALSE	canonical	1	2	junction_5	12.7774106227444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCCATTGACGAACA	NA	False	NA	NA	False	NA	NA	NA	73380593	73420123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73395827_73395886_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
Isoform_48467_43	chr14	+	2162	15	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	6.89720440261332	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCCATTGACGAACA	NA	False	NA	NA	False	NA	NA	NA	73380405	73420123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
Isoform_4847_3	chr10	-	3386	4	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	43	junction_1	44.6392950959876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031589	127026246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127026909_127027204_127027423_127028477_127029673_127030278
Isoform_48470_3	chr14	+	1928	14	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	11.7940913900129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCCATTGACGAACA	NA	False	NA	NA	False	NA	NA	NA	73380472	73420123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
Isoform_48472_317	chr14	+	1330	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	0	-2	0	2	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTTTCAATTTTTTA	NA	False	NA	17	True	AATAAA	-19	NA	73747464	73755987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
Isoform_48473_49	chr14	+	1605	8	NNC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	122.246655978637	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCACAATTAAGTCTCT	NA	False	NA	NA	False	AATAAA	-17	NA	73747464	73756289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333_73755598_73755624
Isoform_48475_9	chr14	+	2301	6	NIC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	0	4	intron_retention	FALSE	canonical	3	317	junction_5	16.1170716943246	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTCAATTTTTTAAA	NA	False	NA	19	True	AATAAA	-21	NA	73747464	73755989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
Isoform_48478_246	chr14	+	2096	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	134	-1	33	1	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGTTATGGGTTTTT	NA	False	NA	12	True	AATAAA	-15	NA	73790238	73833583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
Isoform_48479_296	chr14	+	1625	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	107	497	6	-138	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTACGGTGGTCTCTTTT	NA	False	NA	12	True	TATAAA	-15	NA	73790211	73833085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
Isoform_4848_4	chr10	-	2341	5	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	-5	1	intron_retention	FALSE	canonical	3	43	junction_1	41.5233368119664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACACCCGTCTTCTGTTC	NA	False	NA	1	True	AATAAA	-26	NA	127031602	127026245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127026909_127027204_127027423_127028477_127029673_127030278_127030504_127031562
Isoform_48480_68	chr14	+	2123	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	107	-1	6	1	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGTTATGGGTTTTT	NA	False	NA	12	True	AATAAA	-15	NA	73790211	73833583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
Isoform_48481_1010	chr14	+	1605	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	133	491	32	-132	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTCTCTTTTCTTGCA	NA	False	NA	18	True	TATAAA	-21	NA	73790237	73833091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
Isoform_48489_37	chr14	+	1445	10	NIC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	5	-138	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	503.772435397836	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTACGGTGGTCTCTTTT	NA	False	NA	12	True	TATAAA	-15	NA	73790210	73833085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
Isoform_4849_12	chr10	-	987	4	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	54.0760780957922	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031588	127026246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127026909_127029598_127029673_127030278_127030504_127031562
Isoform_48496_1515	chr14	+	1010	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	67	911	7	6	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTATTTTACCACC	NA	False	NA	19	True	AATAAA	-20	NA	74969803	74987294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
Isoform_48498_22	chr14	+	1055	9	NIC	ENSMUSG00000021996.17	novel	1988	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	441.393514196799	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAATTGTTATTTT	NA	False	NA	13	True	AATAAA	-14	NA	74969756	74987288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983162_74987084
Isoform_4850_8	chr10	-	2230	5	NIC	ENSMUSG00000040415.16	novel	1925	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	4	junction_2	54.3162038437886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031588	127026247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127027423_127028477_127029208_127029598_127029673_127030278_127030504_127031562
Isoform_48501_36	chr14	+	1131	9	FSM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	-6	-8	-6	8	multi-exon	FALSE	canonical	3	49	junction_1	425.971756692859	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTATTTTACCACCAT	NA	False	NA	21	True	AATAAA	-22	NA	74969817	74987296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_74969962_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
Isoform_48503_17	chr14	+	3498	16	ISM	ENSMUSG00000021998.17	ENSMUST00000145303.8	3841	17	40514	1	638	-1	3prime_fragment	TRUE	canonical	2	7	junction_1	5.24679796532027	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGCATATGCTTAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	75414285	75468281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_75414374_75435516_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
Isoform_48506_15	chr14	+	3526	15	ISM	ENSMUSG00000021998.17	ENSMUST00000131802.2	3594	16	7631	-24	60	-2	3prime_fragment	FALSE	canonical	2	7	junction_11	4.86396579606663	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGCATATGCTTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	75435399	75468280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
Isoform_48514_47	chr14	+	6152	19	FSM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	-8	0	1	0	multi-exon	FALSE	canonical	3	74	junction_1	25.8044043517888	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521817	75581866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
Isoform_48515_18	chr14	+	6197	19	FSM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	-53	0	-40	0	multi-exon	FALSE	canonical	3	74	junction_1	25.8044043517888	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521772	75581866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
Isoform_48516_24	chr14	+	6158	19	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	26.5676402070797	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521808	75581866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
Isoform_48517_18	chr14	+	6205	19	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	26.5676402070797	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521761	75581866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
Isoform_4852_10	chr10	-	3315	4	ISM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	0	-262	0	-2	intron_retention	FALSE	canonical	3	105	junction_1	20.8859335970941	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031596	127026248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278
Isoform_48522_3	chr14	+	2754	12	ISM	ENSMUSG00000022000.12	ENSMUST00000022577.6	6151	19	-52	16575	-52	6010	5prime_fragment	FALSE	canonical	3	23	junction_1	28.9073755923357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAGAGGGAGCGAGA	NA	False	NA	83	True	NA	NA	NA	75521760	75565291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983
Isoform_48524_24	chr14	+	6154	19	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	32.4925442540095	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGATTTTCCTTGCTCT	NA	False	NA	19	True	AATAAA	-20	NA	75521817	75581871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
Isoform_48526_6	chr14	+	5812	16	NIC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	37.5933800318915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521809	75581866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_75522106_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
Isoform_48527_5	chr14	+	5810	16	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	38.2285524473818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521808	75581866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_75522106_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
Isoform_4854_11	chr10	-	2216	6	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	0	-4	intron_retention	FALSE	canonical	3	15	junction_5	54.0244389142544	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCCACACCCGTCTTC	NA	False	NA	-4	True	AATAAA	-21	NA	127031588	127026250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127030550_127030682_127031562
Isoform_48540_2113	chr14	+	843	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	209	117	0	1	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGAACTCTTTGCTGTG	1047	False	NA	5	True	AATAAA	-16	NA	76082741	76085738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
Isoform_48541_98	chr14	+	899	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	157	113	-52	5	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTTTGCTGTGATTG	995	False	NA	9	True	AATAAA	-20	NA	76082689	76085742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
Isoform_4855_5	chr10	-	2087	5	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	21	junction_4	47.5939859646153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031588	127026248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127031562
Isoform_48552_681	chr14	+	1660	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	20	2294	20	-2294	multi-exon	FALSE	canonical	3	441	junction_7	36.4295362461713	681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATAGTGTGTCTGTGTCA	NA	False	NA	23	True	AATAAA	-19	NA	76348350	76372525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
Isoform_4856_68	chr10	-	2257	5	FSM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	1	-264	1	0	multi-exon	FALSE	canonical	3	65	junction_4	30.8332207205151	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031595	127026246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
Isoform_48564_4385	chr14	+	1722	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	38	2	-14	0	multi-exon	FALSE	canonical	3	2255	junction_1	40	4385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGTGTTTCTATATGAC	6577	False	NA	29	True	AATAAA	-19	NA	76741955	76745203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_76742282_76742688_76742738_76743856
Isoform_4858_4	chr10	-	3669	3	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	4	-8	intron_retention	FALSE	canonical	3	105	junction_1	23.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTATGCCACACCCGT	NA	False	NA	-8	True	AATAAA	-17	NA	127031584	127026254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127027423_127028477_127029673_127030278
Isoform_48580_3	chr14	+	2778	3	ISM	ENSMUSG00000058997.9	ENSMUST00000227676.2	3823	5	-27	5096	-27	-5096	5prime_fragment	FALSE	canonical	3	64	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAACCAAA	9319	False	NA	NA	False	NA	NA	NA	79086604	79147983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_79086884_79106218_79106297_79145562
Isoform_48581_3	chr14	+	3281	13	FSM	ENSMUSG00000058997.9	ENSMUST00000228884.2	3236	13	-39	-6	13	6	multi-exon	FALSE	canonical	0	0	junction_12	18.263503375737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTGTTTTATCCTATG	9359	False	NA	NA	False	AATAAA	-17	NA	79086644	79195731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79193951
Isoform_48582_3	chr14	+	2031	13	ISM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	-39	82493	23	24490	5prime_fragment	FALSE	canonical	2	44	junction_4	6.8246896551337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTGCTTATTTCAC	9369	False	NA	NA	False	AATAAA	-18	NA	79086654	79220215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675
Isoform_48583_91	chr14	+	3460	26	FSM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	-54	0	8	0	multi-exon	FALSE	canonical	2	39	junction_16	9.45524193238862	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTCTCCGTCCTTTTG	9354	False	NA	3	True	AATAAA	-19	NA	79086639	79302708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
Isoform_48584_3	chr14	+	5730	34	ISM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	140	104261	0	32781	5prime_fragment	FALSE	canonical	2	24	junction_28	14.2462277319776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTTTCTTACCCTAAT	9346	False	NA	NA	False	AATAAA	-15	NA	79086631	79335489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824
Isoform_48585_22	chr14	+	6161	45	FSM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	141	752	1	-752	multi-exon	FALSE	canonical	2	24	junction_28	13.7905487757808	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTCCTGTCTGTGGTT	9347	False	NA	32	True	AATAAA	-45	NA	79086632	79438998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
Isoform_48586_12	chr14	+	6932	45	FSM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	117	5	-23	-5	multi-exon	FALSE	canonical	2	24	junction_28	13.7905487757808	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATGAGTATGTGTGTGT	9323	False	NA	21	True	AATAAA	-30	NA	79086608	79439745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
Isoform_48588_69	chr14	+	1772	11	FSM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	31	-4	31	4	multi-exon	FALSE	canonical	3	73	junction_10	10.5683489722851	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCCTACAGAGTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	79635242	79661031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79635477_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650426_79650545_79653317_79653455_79656627_79656727_79660836
Isoform_48589_8	chr14	+	1843	11	FSM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	5	-49	5	49	multi-exon	FALSE	canonical	3	73	junction_10	10.5683489722851	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACATTTCTTGCATAGAG	NA	False	NA	50	True	AATAAA	-6	NA	79635216	79661076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79635477_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650426_79650545_79653317_79653455_79656627_79656727_79660836
Isoform_4859_8	chr10	-	2628	4	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	0	-3	intron_retention	FALSE	canonical	3	65	junction_3	35.5559027760824	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCACACCCGTCTTCT	NA	False	NA	-3	True	AATAAA	-22	NA	127031597	127026249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127027423_127028477_127029673_127030278_127030504_127031562
Isoform_48593_43	chr14	+	4227	9	FSM	ENSMUSG00000036461.17	ENSMUST00000040131.13	4235	9	-14	22	-14	-22	multi-exon	FALSE	canonical	3	19	junction_5	6.51440711039769	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGTTTTCAAGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	79718619	79819912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79719078_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
Isoform_48596_3	chr14	+	3912	9	FSM	ENSMUSG00000036461.17	ENSMUST00000110835.3	3888	9	-42	18	-42	-18	multi-exon	FALSE	canonical	3	8	junction_1	8.6854763830201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTTCAAGCAAATA	NA	False	NA	NA	False	ATTAAA	-21	NA	79753071	79819916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79753211_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
Isoform_48605_198	chr14	+	2916	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	78	4398	-40	1821	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTTTCATATCTGATAT	NA	False	NA	33	True	AATAAA	-26	NA	79825208	79868238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_48606_17	chr14	+	2977	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	17	4398	17	1821	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTTTCATATCTGATAT	NA	False	NA	33	True	AATAAA	-26	NA	79825147	79868238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_48607_937	chr14	+	1095	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	78	6219	-40	0	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825208	79866417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_48609_80	chr14	+	1156	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	17	6219	17	0	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825147	79866417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_48610_24	chr14	+	1204	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	-31	6219	-31	0	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825099	79866417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_48622_22	chr14	+	5298	12	FSM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	-17	-1	-17	1	multi-exon	FALSE	canonical	3	80	junction_9	9.05812269605902	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTTTTTATTACAAC	NA	False	NA	NA	False	ATTAAA	-23	NA	87654057	87752203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
Isoform_48625_105	chr14	+	2673	14	FSM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	-17	1	-17	1	multi-exon	FALSE	canonical	3	57	junction_12	16.6232175269033	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGGTTCACTTGT	NA	False	NA	6	True	AATAAA	-20	NA	87654057	87782939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
Isoform_48630_17	chr14	+	2909	14	FSM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	-255	3	-255	-1	multi-exon	FALSE	canonical	3	57	junction_12	16.6232175269033	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCTCTGGTTCACTT	NA	False	NA	4	True	AATAAA	-18	NA	87653819	87782937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
Isoform_48632_14	chr14	+	917	2	FSM	ENSMUSG00000022070.8	ENSMUST00000226823.2	1071	2	155	-1	0	1	multi-exon	FALSE	canonical	3	218	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	AATAAA	-45	NA	99283812	99285349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_99284117_99284736
Isoform_48637_377	chr14	+	2680	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	45	1	-32	0	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283857	99311975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
Isoform_48644_9	chr14	+	2513	11	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	97.5676688252825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	5	True	AATAAA	-16	NA	99283857	99311976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_99284117_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
Isoform_48647_17	chr14	+	4336	16	ISM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-6	30813	-6	2	5prime_fragment	FALSE	canonical	2	66	junction_8	17.8940089291236	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTGTCAACTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	99337336	99461116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994
Isoform_48649_139	chr14	+	2804	18	FSM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-6	-1	-6	1	multi-exon	FALSE	canonical	2	66	junction_8	18.7005171736119	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTGTAGAGTTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	99337336	99491930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
Isoform_48655_3281	chr14	+	3348	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	-1	5	-1	-5	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	3281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGTGGTGCCTTCTT	NA	False	NA	17	True	AATAAA	-13	NA	99536125	99552467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
Isoform_4866_1124	chr10	-	3329	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	-22	0	8	0	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047446	127032935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
Isoform_4867_378	chr10	-	3356	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	-49	0	-19	0	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047473	127032935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
Isoform_48688_45	chr14	+	1187	5	ISM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	-7	28364	-7	-61	5prime_fragment	FALSE	canonical	3	4015	junction_1	248.252895249985	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTTCTCGTTTTCACT	110	False	NA	NA	False	AGTAAA	-18	NA	101891422	101905197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427
Isoform_48692_27	chr14	+	1100	10	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_6	1788.13434742595	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	112	False	NA	22	True	AATAAA	-18	NA	101891424	101933561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101923006_101923199_101928007_101928084_101932594_101932654_101933337
Isoform_48693_2169	chr14	+	904	9	FSM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	3225	junction_5	471.372729376658	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	116	False	NA	22	True	AATAAA	-18	NA	101891428	101933561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
Isoform_48698_30	chr14	+	854	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	164	junction_5	1503.09389770105	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGTTGTTTTTGCT	116	False	NA	20	True	AATAAA	-16	NA	101891428	101933559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101928007_101928084_101932594_101932654_101933337
Isoform_48706_3	chr14	+	5104	29	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-34	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_26	7.55751754404655	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTTTTTAAAACTCTT	NA	False	NA	19	True	AATAAA	-19	NA	101967358	102172126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102168607_102168717_102170005_102170109_102171331
Isoform_48707_3	chr14	+	6216	27	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-33	0	intron_retention	FALSE	canonical	3	14	junction_7	6.06486144760935	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCTTTTTAAAACTCT	NA	False	NA	18	True	AATAAA	-18	NA	101967359	102172125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005
Isoform_48709_5	chr14	+	3767	19	ISM	ENSMUSG00000033060.17	ENSMUST00000159314.8	5774	27	55871	-5	12400	3	3prime_fragment	FALSE	canonical	3	16	junction_2	6.04739511313102	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTTTAAAACTCTTTA	NA	False	NA	21	True	AATAAA	-21	NA	102133954	102172128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
Isoform_48712_175	chr14	+	2345	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	91	9	91	-9	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCAGGGCTTGCATC	NA	False	NA	-3	True	NA	NA	NA	103307742	103315055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
Isoform_48716_7	chr14	+	2413	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	12	20	12	-20	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACTCAAGAAAAAAACCA	NA	False	NA	-14	True	NA	NA	NA	103307663	103315044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
Isoform_48718_6	chr14	+	5929	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	85	-3569	85	3569	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATATACCATCAACTC	NA	False	NA	NA	False	AATAAA	-18	NA	103307736	103318633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
Isoform_48719_13	chr14	+	3755	3	NIC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	74	-3	intron_retention	FALSE	canonical	3	258	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTTGCATCTTGTAT	NA	False	NA	3	True	NA	NA	NA	103307725	103315061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_103307904_103309069_103310849_103313263
Isoform_48721_26	chr14	+	3025	8	FSM	ENSMUSG00000055717.14	ENSMUST00000160805.8	1998	8	-432	-595	-14	-2	multi-exon	FALSE	canonical	3	18	junction_2	16.4812818998167	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCAGCTCACGCATGAA	NA	False	NA	25	True	AATAAA	-15	NA	103887649	103942341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_103888345_103894368_103894509_103921669_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
Isoform_48723_80	chr14	+	2876	7	FSM	ENSMUSG00000055717.14	ENSMUST00000069443.14	2863	7	-14	1	-14	-1	multi-exon	FALSE	canonical	3	39	junction_2	8.46069343099804	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAGCTCACGCATGAAT	NA	False	NA	26	True	AATAAA	-16	NA	103887649	103942342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_103888345_103894368_103894509_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
Isoform_48726_30	chr14	+	1891	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	153	488	-27	7	multi-exon	TRUE	canonical	3	271	junction_7	54.1807255433901	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTTTTCTTTAAATGT	NA	False	NA	-55	True	AATAAA	-24	NA	105496160	105546244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
Isoform_48727_160	chr14	+	2352	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	179	1	-1	-1	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTATTTCTTGTAT	NA	False	NA	9	True	AATAAA	-16	NA	105496186	105546731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
Isoform_48732_30	chr14	+	2374	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	156	2	-24	-2	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTTGTATTTCTTGTA	NA	False	NA	8	True	AATAAA	-15	NA	105496163	105546730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
Isoform_48733_40	chr14	+	2121	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	0	-426	0	-1	multi-exon	FALSE	canonical	3	137	junction_7	99.9552961302691	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTATTTCTTGTAT	NA	False	NA	9	True	AATAAA	-16	NA	105496187	105546731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
Isoform_48734_45	chr14	+	1702	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	-8	1	-8	-1	multi-exon	FALSE	canonical	3	137	junction_7	99.9552961302691	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGCCTCGTTTAGTGAT	NA	False	NA	5	True	AATAAA	-15	NA	105496179	105546304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
Isoform_48739_4	chr14	+	2413	9	FSM	ENSMUSG00000058571.12	ENSMUST00000078849.12	1668	9	-428	-317	-23	-3	multi-exon	FALSE	canonical	0	0	junction_1	3.09989919190931	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGGGGTTTTGGTTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	117162919	118212815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_117163508_117424073_117424233_117673063_117673456_117861796_117861963_118107764_118107896_118125933_118126078_118188549_118188687_118202110_118202287_118212295
Isoform_4874_15	chr10	-	6061	29	FSM	ENSMUSG00000074657.6	ENSMUST00000099172.5	6295	29	235	-1	-18	1	multi-exon	FALSE	canonical	3	9	junction_1	8.75808664222118	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTTGCTTCTTATTC	NA	False	NA	1	True	AATAAA	-17	NA	127098982	127061563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
Isoform_48740_353	chr14	+	1872	9	FSM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	1	2	1	-2	multi-exon	FALSE	canonical	3	145	junction_5	22.6463987203264	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATTAGCATTTGTTTA	NA	False	NA	3	True	AATAAA	-22	NA	118374570	118400671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
Isoform_48741_12	chr14	+	1846	8	NIC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-23	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	66.9044399246616	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATTAGCATTTGTTTA	NA	False	NA	3	True	AATAAA	-22	NA	118374546	118400671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118395308_118395467_118397404_118397597_118398968_118399047_118400000
Isoform_48742_31	chr14	+	1847	9	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	53.8678939629164	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATTAGCATTTGTTTA	NA	False	NA	3	True	AATAAA	-22	NA	118374570	118400671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_118374753_118377173_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
Isoform_48744_3	chr14	+	668	2	FSM	ENSMUSG00000090534.2	ENSMUST00000164755.2	2322	2	483	1171	-165	-1171	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTTGTCTTCTGTCT	NA	False	NA	0	True	AATACA	-10	NA	118474126	118475000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_118474357_118474562
Isoform_4875_41	chr10	-	4028	28	FSM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	-33	1	-18	-1	multi-exon	FALSE	canonical	3	28	junction_13	6.98675996544999	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGCTGTCCATCGGTC	NA	False	NA	-8	True	ATTAAA	-17	NA	127098982	127064919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
Isoform_48752_89	chr14	+	5178	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-33	-4	-33	4	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGCTTCTTATTCATG	2296	False	NA	19	True	AATAAA	-21	NA	119175354	119219113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
Isoform_48764_70	chr14	+	4507	9	FSM	ENSMUSG00000022139.18	ENSMUST00000088419.13	4552	9	40	5	2	-3	multi-exon	FALSE	canonical	3	31	junction_3	5.41842920042331	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTGTGTTGCGGTCT	6869	False	NA	2	True	AATAAA	-12	NA	120513120	120669104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
Isoform_48765_4	chr14	+	4458	8	NIC	ENSMUSG00000022139.18	novel	4552	9	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	13.4952750612795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATTGTGTTGCGGTC	6822	False	NA	1	True	AATAAA	-11	NA	120513073	120669103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120666346
Isoform_48767_95	chr14	+	4204	4	NNC	ENSMUSG00000051615.15	novel	4191	2	NA	NA	-61	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.7079795189788	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGGCTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	120715794	120744602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_120715999_120716022_120716453_120741012_120742137_120742156
Isoform_48770_37	chr14	+	4247	4	NNC	ENSMUSG00000051615.15	novel	4191	2	NA	NA	-106	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.7079795189788	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGGCTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	120715749	120744602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_120715999_120716022_120716453_120741012_120742136_120742157
Isoform_48775_339	chr14	+	4554	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-38	2	-38	-2	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTTGCATTACTTCAT	1793	False	NA	14	True	ATTAAA	-15	NA	121148597	121185409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
Isoform_48779_775	chr14	+	4009	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-82	591	-82	-10	multi-exon	TRUE	canonical	3	890	junction_17	126.92017018583	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAAAGAGGCCTGTGTA	1749	False	NA	8	True	AATAAA	-10	NA	121148553	121184820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
Isoform_48780_187	chr14	+	4609	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-54	-37	-54	37	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTGAAAATGAAATGGAT	1777	False	NA	53	True	ATTAAA	-16	NA	121148581	121185448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
Isoform_4882_15	chr10	-	4260	13	FSM	ENSMUSG00000025409.15	ENSMUST00000119078.8	4287	13	27	0	27	0	multi-exon	FALSE	canonical	3	53	junction_4	21.7579806558932	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124860	127117824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
Isoform_4887_12	chr10	-	4134	13	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	40	junction_5	24.2206294073645	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124731	127117824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
Isoform_48872_11	chr14	+	4733	27	NIC	ENSMUSG00000025555.15	novel	797	8	NA	NA	-78	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	30.9907649920569	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACCACCTGTGTCTT	NA	False	NA	28	True	AATAAA	-41	NA	121272533	121521149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_121272751_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_48873_16	chr14	+	5023	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	-137	-1	-137	1	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCTTCTCTTTGT	NA	False	NA	36	True	NA	NA	NA	121272838	121521157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_48876_54	chr14	+	4865	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	14	6	14	-6	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACCACCTGTGTCTTC	NA	False	NA	29	True	AATAAA	-42	NA	121272989	121521150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_48880_25	chr14	+	4968	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	-90	7	-90	-7	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACCACCTGTGTCTT	NA	False	NA	28	True	AATAAA	-41	NA	121272885	121521149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_48882_6	chr14	+	4888	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-40	-7	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	30.1476887355345	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACCACCTGTGTCTT	NA	False	NA	28	True	AATAAA	-41	NA	121272935	121521149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_48883_5	chr14	+	5000	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-151	-6	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	30.1476887355345	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACCACCTGTGTCTTC	NA	False	NA	29	True	AATAAA	-42	NA	121272824	121521150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_48884_10	chr14	+	4829	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	20	-6	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	30.1476887355345	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACCACCTGTGTCTTC	NA	False	NA	29	True	AATAAA	-42	NA	121272995	121521150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_4889_4	chr10	-	1951	7	NIC	ENSMUSG00000025409.15	novel	2909	8	NA	NA	-472	-2	intron_retention	FALSE	canonical	3	41	junction_4	32.087120988542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTGACTCTGTACTCA	425	False	NA	-8	True	NA	NA	NA	127120712	127117826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120082_127120203_127120355_127120566
Isoform_48891_634	chr14	+	2158	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-18	-1	-18	1	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	8868	False	NA	17	True	AATAAA	-17	NA	122116013	122258447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
Isoform_48892_56	chr14	+	2189	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-50	0	-50	0	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	8836	False	NA	16	True	AATAAA	-16	NA	122115981	122258446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
Isoform_48896_16	chr14	+	2078	8	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	124.704057836208	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	8900	False	NA	17	True	AATAAA	-17	NA	122116045	122258447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122231636_122231883_122246202_122246326_122257361
Isoform_48904_11	chr14	+	917	6	NIC	ENSMUSG00000041765.7	novel	688	5	NA	NA	65	-797	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	151.832275883621	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTTTTTTACTGGGC	2075	False	NA	21	True	ATTAAA	-18	NA	122183790	122257649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_122183879_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
Isoform_48907_34	chr14	+	915	2	FSM	ENSMUSG00000071229.4	ENSMUST00000045976.7	913	2	-11	9	-11	-9	multi-exon	FALSE	canonical	3	25	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGGAACCTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	122272074	122275823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122272425_122275258
Isoform_48908_77	chr14	+	2835	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	1	271	1	-271	multi-exon	TRUE	canonical	3	817	junction_12	125.603480743967	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344450	122396745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
Isoform_48909_1454	chr14	+	2762	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	74	271	-26	-271	multi-exon	FALSE	canonical	3	817	junction_12	125.603480743967	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344523	122396745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
Isoform_4891_3	chr10	-	4144	13	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	18	0	intron_retention	FALSE	canonical	3	41	junction_4	23.7748408103094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124741	127117824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
Isoform_48910_170	chr14	+	2227	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	44	836	44	52	multi-exon	FALSE	canonical	3	817	junction_12	125.603480743967	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGTTTTGTGACTAC	NA	False	NA	13	True	AATAAA	-18	NA	122344493	122396180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
Isoform_48911_160	chr14	+	3002	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	99	6	-1	-6	multi-exon	FALSE	canonical	3	817	junction_12	125.603480743967	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTACGTTCCAAAGTGTA	NA	False	NA	12	True	ATTAAA	-14	NA	122344548	122397010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
Isoform_48913_53	chr14	+	2824	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	74	209	-26	-209	multi-exon	FALSE	canonical	3	817	junction_12	125.603480743967	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTTTATTGGATGATA	NA	False	NA	93	True	AATACA	-17	NA	122344523	122396807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
Isoform_48932_12	chr14	+	962	5	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	7	24038	7	-24031	5prime_fragment	FALSE	canonical	3	648	junction_1	14.6180539060437	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTATGGGGTCTACT	NA	False	NA	13	True	AATAAA	-26	NA	122419122	122615608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195
Isoform_48934_437	chr14	+	1222	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	8	1	8	-1	multi-exon	FALSE	canonical	3	643	junction_7	45.2372430997437	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTATGGTTTTGCTATTG	NA	False	NA	11	True	AATAAA	-21	NA	122419123	122639645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
Isoform_48936_11	chr14	+	1029	7	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	249.458357691664	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTATGGTTTTGCTAT	NA	False	NA	9	True	AATAAA	-19	NA	122419127	122639643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_122419194_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
Isoform_4894_9	chr10	-	4283	13	FSM	ENSMUSG00000025409.15	ENSMUST00000026476.13	4165	13	-118	0	10	0	multi-exon	FALSE	canonical	3	40	junction_5	25.9994658064781	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124877	127117824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
Isoform_48942_11	chr14	+	2078	3	FSM	ENSMUSG00000061524.9	ENSMUST00000075888.6	2440	3	-30	392	-30	-392	multi-exon	FALSE	canonical	2	3	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAACTGAAAACATAAAAA	628	False	NA	NA	False	AAGAAA	-39	NA	122712816	122716872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122714160_122715951_122716116_122716301
Isoform_48943_3	chr14	+	2737	3	NNC	ENSMUSG00000061524.9	novel	2440	3	NA	NA	-687	-389	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTGAAAACATAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-42	NA	122712159	122716875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_122714159_122715951_122716116_122716301
Isoform_48944_7	chr14	+	1157	10	ISM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	-28	230870	-13	-5253	5prime_fragment	FALSE	canonical	3	76	junction_1	11.3409560421782	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAACAGCAGT	NA	False	NA	NA	False	NA	NA	NA	122771722	122896486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089
Isoform_48945_267	chr14	+	2478	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	-7	121	1	-2	multi-exon	FALSE	canonical	3	76	junction_1	20.0942015919555	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATATTAGTTTGCCCTT	NA	False	NA	11	True	AATAAA	-14	NA	122771743	123127235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
Isoform_48947_18	chr14	+	2372	23	NIC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_16	27.256245019481	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTTTTC	NA	False	NA	16	True	AATAAA	-19	NA	122771743	123127240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
Isoform_48948_5	chr14	+	2429	23	NIC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	29.4392847671832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTAGTTTGCCCTTTTTT	NA	False	NA	15	True	AATAAA	-18	NA	122771742	123127239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
Isoform_48949_3	chr14	+	2402	23	NIC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	29.3453362620124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTT	NA	False	NA	13	True	AATAAA	-16	NA	122771743	123127237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_122771872_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
Isoform_48953_13	chr14	+	2237	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4478	359	intron_retention	FALSE	canonical	3	21	junction_4	63.0672040146241	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACATGTATGCTTCTGCT	NA	False	NA	NA	False	AATAAA	-38	NA	41761473	41826137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
Isoform_48954_47	chr14	+	1877	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4478	1	intron_retention	FALSE	canonical	3	21	junction_4	63.0672040146241	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTCACTCTTAAGAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	41761473	41825777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
Isoform_48955_3	chr14	+	3188	6	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	354	intron_retention	FALSE	canonical	3	69	junction_4	59.7394342122521	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGACATGTATGCTT	NA	False	NA	NA	False	AATAAA	-33	NA	41761472	41826132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41819378_41820058_41820240_41825013
Isoform_48956_4	chr14	+	1360	3	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4477	-58496	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_2	77.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	AAAAAG	-15	NA	41761474	41767280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_41761595_41761988_41762060_41766111
Isoform_48957_10	chr14	+	1962	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4478	354	intron_retention	FALSE	canonical	3	21	junction_4	63.2262252198845	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGACATGTATGCTT	NA	False	NA	NA	False	AATAAA	-33	NA	41761473	41826132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_41761595_41761988_41762060_41766111_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
Isoform_48958_30	chr14	+	1606	7	NNC	ENSMUSG00000052334.12	novel	1573	6	NA	NA	-4478	0	intron_retention	TRUE	canonical	3	21	junction_4	63.2262252198845	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41761473	41825776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_41761595_41761988_41762060_41766111_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
Isoform_48959_3	chr14	+	5003	4	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4478	-45734	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	93.667259784599	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41761473	41780042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_41761595_41761988_41762060_41766111_41766287_41775406
Isoform_48964_9	chr14	+	1725	3	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19443	-29549	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	284	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATTCACTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	122514895	122610090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_122514996_122548655_122548843_122608652
Isoform_48966_47	chr14	+	1234	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19461	-1	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	209.063900005989	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTATGGTTTTGCTATTG	NA	False	NA	11	True	AATAAA	-21	NA	122514913	122639645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
Isoform_48968_30	chr14	+	4757	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	193	-3	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGGTTTTTTGTTTGTT	NA	False	NA	18	True	AATAAA	-14	NA	57124302	57197806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_48969_3	chr14	+	4906	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	40	-7	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGCTGGGTTTTTTGTT	NA	False	NA	14	True	AATAAA	-10	NA	57124149	57197802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_4897_110	chr10	-	2854	22	FSM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	103	5	-5	-1	multi-exon	FALSE	canonical	3	61	junction_3	467.860135698655	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGCCCTCTCCTGGTC	NA	False	NA	-12	True	AATAAA	-21	NA	127147552	127132095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127132310_127132409_127132503_127132585_127132610_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
Isoform_48970_7	chr14	+	6728	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	230	-344	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCTCAGTCTTTTTTTT	NA	False	NA	-12	True	ATTAAA	-16	NA	57124339	57199814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_48971_12	chr14	+	4947	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	193	187	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTTCTGCATCAC	NA	False	NA	26	True	ATTAAA	-20	NA	57124302	57197996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_48972_5	chr14	+	1736	5	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14667	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.6624340560681	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGCAGTGTATGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	16042623	16063941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_16042755_16058159_16058323_16059272_16059405_16060080_16060263_16062813
Isoform_48974_10	chr14	+	2102	8	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14628	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.16292440618547	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	16042662	16063946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16057290_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
Isoform_48975_5	chr14	+	1125	2	Intergenic	novelGene_3471	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGCAAGAATGTGTT	8672	False	NA	NA	False	AATAAA	-16	NA	41146550	41148274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_41146812_41147410
Isoform_48976_37	chr14	+	930	2	Intergenic	novelGene_3472	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGCAAGAATGTGTT	8867	False	NA	NA	False	AATAAA	-16	NA	41146745	41148274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_41146812_41147410
Isoform_48978_9	chr14	+	3899	7	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	3062	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.0969870599771	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGCCTGTTTACTGT	8208	False	NA	4	True	AATAAA	-14	NA	34100739	34126242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_34100981_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
Isoform_48981_3	chr14	+	1607	5	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45964	-29	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	10.8714074525794	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43735068	43788641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_43735407_43781959_43782123_43783111_43783244_43783926_43784109_43787849
Isoform_48983_5	chr14	+	1444	4	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45955	-20	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	7.87400787401181	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAAGAAACTTCTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	43735077	43788650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_43735407_43783111_43783244_43783926_43784109_43787849
Isoform_48984_4	chr14	+	1887	8	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45962	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4315064363021	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43735070	43788641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_43735407_43778540_43778627_43779598_43779685_43781120_43781231_43781959_43782123_43783111_43783244_43783926_43784109_43787849
Isoform_48985_5	chr14	+	1724	6	NNC	ENSMUSG00000090788.3	novel	1387	5	NA	NA	-70440	-2	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_3	9.19565114605812	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTAAGAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	43173230	43251479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_43173568_43243668_43243801_43244528_43244692_43245648_43245781_43246462_43246644_43250700
Isoform_48986_25	chr14	+	2765	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	11497	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.2427536216917	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACCACCTGTGTCTTC	NA	False	NA	29	True	AATAAA	-42	NA	121503816	121521150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_121503920_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_48989_9	chr14	+	1031	3	Antisense	novelGene_ENSMUSG00000090481.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTATGATCCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	42300584	42317528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_42300714_42304885_42305330_42317070
Isoform_48990_16	chr14	+	1035	3	Antisense	novelGene_ENSMUSG00000091847.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGATCCATTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	41085319	41102275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_41085450_41089611_41090056_41101814
Isoform_48992_20	chr14	+	1657	3	NNC	ENSMUSG00000035235.14	novel	1550	3	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	103	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGAGTTTGTGCTG	NA	False	NA	16	True	AATAAA	-14	NA	61837013	61843393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_61837154_61837242_61837345_61841978
Isoform_48994_15	chr14	+	1756	6	NNC	ENSMUSG00000041765.7	novel	688	5	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	167.24281748404	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	2075	False	NA	16	True	AATAAA	-16	NA	122183790	122258446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_122183921_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
Isoform_49_136	ERCC-00025	+	1976	1	FSM	ERCC-00025A	DQ883689	1978	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	1977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00025_+_0_2000
Isoform_49004_7	chr14	+	2919	9	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	60.6460015170003	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAATTAGCATTTGTTT	NA	False	NA	2	True	AATAAA	-21	NA	118374560	118400670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_118375791_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
Isoform_49006_13	chr14	+	3600	8	NNC	ENSMUSG00000036461.17	novel	4235	9	NA	NA	44557	-22	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.507528884819	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGTTTTCAAGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	79797694	79819912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_79797826_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
Isoform_49007_12	chr14	+	1078	8	NNC	ENSMUSG00000061356.14	novel	2745	19	NA	NA	20067	-19	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	14.4094640101991	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGACTTTCTATATAAAA	6283	False	NA	NA	False	AATAAA	-16	NA	65862782	65885874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_65862807_65872451_65872617_65875999_65876158_65877431_65877571_65878687_65878797_65879306_65879444_65882458_65882550_65885619
Isoform_49008_6	chr14	+	1924	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	12298	-935	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	37.0706272533751	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCCAATCTTTCT	NA	False	NA	24	True	AGTAAA	-21	NA	121504617	121520221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_121504809_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_49009_5	chr14	+	2820	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	12331	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	37.0706272533751	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACCACCTGTGTCTTC	NA	False	NA	29	True	AATAAA	-42	NA	121504650	121521150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_121504809_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_49011_4	chr14	+	3081	11	NNC	ENSMUSG00000023411.13	novel	3267	10	NA	NA	-186	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.3731073427233	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCAGGCTCCAGAGCT	NA	False	NA	15	True	AATAAA	-15	NA	56062065	56071397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_56062097_56062465_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56070262_56071013
Isoform_49013_8	chr14	+	4072	24	NNC	ENSMUSG00000022229.4	novel	3950	23	NA	NA	-263	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.5956194011477	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGTCATTGTGGCA	NA	False	NA	5	True	AGTAAA	-14	NA	56602261	56626007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_56602417_56602557_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
Isoform_49014_7	chr14	+	3807	13	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	26925	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3773479628573	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	26863780	27125868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_26863950_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
Isoform_49018_5	chr14	+	3374	15	NNC	ENSMUSG00000025555.15	novel	961	4	NA	NA	-10571	-30	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	37.1928921232242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCACATACAAGTCTGA	NA	False	NA	5	True	AATAAA	-18	NA	121481748	121521126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_121482073_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_49019_3	chr14	+	1717	3	Antisense	novelGene_ENSMUSG00000022076.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAATAAAGACTATAT	NA	False	NA	NA	False	NA	NA	NA	96345179	96356148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_96345261_96347378_96347551_96354684
Isoform_49020_3	chr14	+	588	2	Antisense	novelGene_ENSMUSG00000115615.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCAGTGAGCATGCGCT	NA	False	NA	NA	False	AATAAA	-22	NA	75609286	75616291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_75609485_75615901
Isoform_49023_3	chr14	+	424	3	Intergenic	novelGene_3699	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACAAGAGTCTTGATTT	NA	False	NA	NA	False	AATAAA	-14	NA	99576592	99588761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_99576681_99578571_99578664_99588517
Isoform_49026_3	chr14	+	912	2	Intergenic	novelGene_3382	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGACTCCCTAGTCATT	NA	False	NA	NA	False	AATAAA	-29	NA	12258588	12259740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_12258865_12259104
Isoform_49034_8	chr14	-	171	1	Intergenic	novelGene_3468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	40715531	40715360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_40715400_40715500
Isoform_49037_154	chr14	-	162	1	Intergenic	novelGene_3469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	40851604	40851442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_40851400_40851600
Isoform_49038_9	chr14	+	180	1	Intergenic	novelGene_3470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTGATAGTTTTATC	NA	False	NA	NA	False	NA	NA	NA	40888397	40888577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_40888400_40888600
Isoform_49041_5	chr14	-	963	1	FSM	ENSMUSG00000033111.17	ENSMUST00000223697.2	915	1	-47	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	10185509	10184546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_10184500_10185500
Isoform_49042_3	chr14	+	2037	1	Intergenic	novelGene_3473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAAAGAATACATGA	NA	False	NA	NA	False	NA	NA	NA	43129177	43131214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_43129200_43131200
Isoform_49043_5	chr14	+	180	1	Intergenic	novelGene_3474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAGATGAAGTACAT	NA	False	NA	NA	False	NA	NA	NA	43150635	43150815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_43150600_43150800
Isoform_49044_3	chr14	+	258	1	Intergenic	novelGene_3475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGACAAAACTTTCAA	NA	False	NA	NA	False	NA	NA	NA	43169945	43170203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_43169900_43170200
Isoform_49045_5	chr14	+	177	1	Intergenic	novelGene_3476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTAGAAGC	NA	False	NA	NA	False	NA	NA	NA	43733311	43733488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_43733300_43733500
Isoform_49046_46	chr14	+	1637	1	FSM	ENSMUSG00000049235.9	ENSMUST00000094051.6	1647	1	4	6	4	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAGGAAGAGAAA	NA	False	NA	NA	False	AGTAAA	-45	NA	43951192	43952829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_43951200_43952800
Isoform_49047_9	chr14	+	166	1	Intergenic	novelGene_3477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACAGGATAGAAC	NA	False	NA	NA	False	NA	NA	NA	44358308	44358474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_44358300_44358500
Isoform_49048_17	chr14	+	171	1	Antisense	novelGene_ENSMUSG00000115294.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATAGGATTT	NA	False	NA	NA	False	NA	NA	NA	44429297	44429468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_44429300_44429500
Isoform_49053_15	chr14	-	200	1	Intergenic	novelGene_3478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	5515	False	NA	NA	False	NA	NA	NA	45383289	45383089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_45383100_45383300
Isoform_49055_110	chr14	+	182	1	Intergenic	novelGene_3479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAAAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	45454679	45454861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_45454700_45454900
Isoform_49056_3	chr14	+	2056	1	FSM	ENSMUSG00000049092.12	ENSMUST00000227086.2	4997	1	-27	2968	-27	588	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACCTCATAATACCA	NA	False	NA	NA	False	NA	NA	NA	45457146	45459202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_45457100_45459200
Isoform_49057_6	chr14	-	1880	1	Intergenic	novelGene_3480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATGTGTGAAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	45466242	45464362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_45464400_45466200
Isoform_49067_4	chr14	+	728	1	NIC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	10	-14696	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCCACAAAAAACGAT	NA	False	NA	NA	False	NA	NA	NA	45588643	45589371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_45588600_45589400
Isoform_49068_6	chr14	-	1181	1	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGCTTACTCTATCAT	1285	False	NA	NA	False	NA	NA	NA	45597373	45596192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_45596200_45597400
Isoform_49071_9	chr14	-	165	1	Intergenic	novelGene_3481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	45687682	45687517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_45687500_45687700
Isoform_49072_11	chr6	-	176	1	Intergenic	novelGene_9486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACAGTGCCT	3211	False	NA	NA	False	NA	NA	NA	87576720	87576544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_87576500_87576700
Isoform_49073_76	chr14	+	2684	1	Antisense	novelGene_ENSMUSG00000037712.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAATCTCAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	45714862	45717546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_45714900_45717500
Isoform_49076_10	chr14	-	191	1	Intergenic	novelGene_3482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	45807113	45806922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_45806900_45807100
Isoform_49077_3	chr14	+	171	1	Intergenic	novelGene_3483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGGAACCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	45922657	45922828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_45922700_45922800
Isoform_49078_21	chr14	-	165	1	Intergenic	novelGene_3484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATCCAGACACTT	NA	False	NA	NA	False	NA	NA	NA	45985882	45985717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_45985700_45985900
Isoform_49092_47	chr14	+	173	1	Intergenic	novelGene_3485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	46748108	46748281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_46748100_46748300
Isoform_49093_4	chr14	+	153	1	Intergenic	novelGene_3486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAATAAATCTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	46879848	46880001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_46879800_46880000
Isoform_49095_11	chr14	+	182	1	Intergenic	novelGene_3487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGAAAGTCTT	2474	False	NA	NA	False	NA	NA	NA	47003860	47004042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_47003900_47004000
Isoform_49099_10	chr14	-	1682	1	NIC	ENSMUSG00000015759.12	novel	1538	5	NA	NA	-7	-10373	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47025798	47024116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_47024100_47025800
Isoform_49101_21	chr14	+	181	1	Intergenic	novelGene_3488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTAAAAAATCTGTTT	NA	False	NA	NA	False	NA	NA	NA	47028748	47028929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_47028700_47028900
Isoform_49115_16	chr14	+	157	1	Intergenic	novelGene_3489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	47142358	47142515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_47142400_47142500
Isoform_49116_13	chr14	+	172	1	Intergenic	novelGene_3490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAACTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	47447921	47448093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_47447900_47448100
Isoform_49117_5	chr14	+	1961	2	Intergenic	novelGene_3379	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	10649759	10651755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_10650651_10650685
Isoform_49118_5	chr14	+	161	1	Intergenic	novelGene_3491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAACAAAATTATATAT	7949	False	NA	NA	False	NA	NA	NA	47502160	47502321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_47502200_47502300
Isoform_49119_119	chr13	+	175	1	Intergenic	novelGene_3006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7766	False	NA	NA	False	NA	NA	NA	44774387	44774562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_44774400_44774600
Isoform_49132_4	chr14	-	172	1	Intergenic	novelGene_3492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAGGAAACA	6973	False	NA	NA	False	NA	NA	NA	47561458	47561286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_47561300_47561500
Isoform_49135_4	chr14	+	1887	1	Intergenic	novelGene_3380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGGAAAATACCTGGAA	NA	False	NA	NA	False	NA	NA	NA	10715822	10717709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_10715800_10717700
Isoform_49137_13	chr14	+	172	1	Intergenic	novelGene_3493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATCTAAAAAAAAAAAAAA	1964	False	NA	NA	False	NA	NA	NA	47676765	47676937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_47676800_47676900
Isoform_49138_28	chr10	+	172	1	Intergenic	novelGene_790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACTCTAG	NA	False	NA	NA	False	NA	NA	NA	34097786	34097958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_34097800_34098000
Isoform_49141_34	chr14	-	4829	1	Antisense	novelGene_ENSMUSG00000037536.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAAG	8253	False	NA	NA	False	NA	NA	NA	47715790	47710961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_47711000_47715800
Isoform_49149_6	chr14	+	799	1	Antisense	novelGene_ENSMUSG00000037526.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACCAAAAAAAACAAACCA	NA	False	NA	NA	False	NA	NA	NA	47783240	47784039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_47783200_47784000
Isoform_49152_12	chr14	+	177	1	Intergenic	novelGene_3495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTAAATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	47802490	47802667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_47802500_47802700
Isoform_49154_3	chr14	+	366	1	Intergenic	novelGene_3496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAACCTA	NA	False	NA	NA	False	NA	NA	NA	47811516	47811882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_47811500_47811900
Isoform_49158_5	chr14	+	159	1	Intergenic	novelGene_3498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATGTAAGTATATAGA	NA	False	NA	NA	False	NA	NA	NA	47870738	47870897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_47870700_47870900
Isoform_49162_7	chr14	-	3267	1	Antisense	novelGene_ENSMUSG00000021843.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCATTTTTGAATAAGAGA	NA	False	NA	NA	False	NA	NA	NA	47962747	47959480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_47959500_47962700
Isoform_49163_391	chr14	-	675	1	FSM	ENSMUSG00000062081.7	ENSMUST00000180532.2	378	1	-59	-238	-59	238	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	48317268	48316593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_48316600_48317300
Isoform_49164_42	chr14	-	177	1	Intergenic	novelGene_3499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	48562832	48562655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_48562700_48562800
Isoform_49165_25	chr14	-	177	1	Intergenic	novelGene_3500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	48681129	48680952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_48681000_48681100
Isoform_49166_3	chr14	+	1975	1	FSM	ENSMUSG00000036339.19	ENSMUST00000226400.2	2281	1	66	240	11	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGATATGTTCTGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	48683819	48685794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_48683800_48685800
Isoform_49168_7	chr14	-	154	1	Intergenic	novelGene_3501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAAGACAATAAGAGT	NA	False	NA	NA	False	NA	NA	NA	48824063	48823909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_48823900_48824100
Isoform_49169_9	chr14	-	172	1	Intergenic	novelGene_3502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	48871437	48871265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_48871300_48871400
Isoform_49170_4	chr14	-	320	1	Intergenic	novelGene_3503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48956064	48955744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_48955700_48956100
Isoform_49171_10	chr14	-	206	1	Intergenic	novelGene_3504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	48956063	48955857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_48955900_48956100
Isoform_49172_809	chr14	+	177	1	Intergenic	novelGene_3505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	809	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	49226725	49226902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_49226700_49226900
Isoform_49178_17	chr14	+	213	1	Intergenic	novelGene_3506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTTTAAGCA	NA	False	NA	NA	False	NA	NA	NA	49473862	49474075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_49473900_49474100
Isoform_49186_73	chr14	+	6768	1	Intergenic	novelGene_3507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	49839816	49846584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_49839800_49846600
Isoform_4919_3922	chr10	-	2800	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	133	6	25	-1	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	3922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGCCCTCTCCTGGTC	NA	False	NA	-12	True	AATAAA	-21	NA	127147522	127132095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
Isoform_4920_432	chr10	-	2866	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	67	6	-41	-1	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGCCCTCTCCTGGTC	NA	False	NA	-12	True	AATAAA	-21	NA	127147588	127132095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
Isoform_49212_5	chr14	+	1694	1	FSM	ENSMUSG00000102189.2	ENSMUST00000193092.2	3031	1	138	1199	138	-1199	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	50298954	50300648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_50299000_50300600
Isoform_49213_8	chr14	+	175	1	Intergenic	novelGene_3508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAAGGCTTGGC	2496	False	NA	NA	False	NA	NA	NA	51011517	51011692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_51011500_51011700
Isoform_49214_23	chr14	+	178	1	Intergenic	novelGene_3509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAAATATATT	NA	False	NA	NA	False	NA	NA	NA	51028759	51028937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_51028800_51028900
Isoform_49219_33	chr14	-	304	2	NNC	ENSMUSG00000071470.5	novel	444	3	NA	NA	-35	-13638	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATCGAGATCCTTTTGG	5444	False	NA	NA	False	NA	NA	NA	51045224	51044899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_-_51045000_51045020
Isoform_49221_9	chr14	+	174	1	Intergenic	novelGene_3510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTTTGATCC	NA	False	NA	NA	False	NA	NA	NA	51065812	51065986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_51065800_51066000
Isoform_49222_50	chr14	+	177	1	ISM	ENSMUSG00000097431.3	ENSMUST00000181482.2	2513	2	6973	1478	6965	201	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGTAACATGAAAT	345	False	NA	NA	False	NA	NA	NA	51114805	51114982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_51114800_51115000
Isoform_49224_540	chr14	-	175	1	Intergenic	novelGene_3511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	540	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATTAATTAATTA	4428	False	NA	NA	False	NA	NA	NA	51142356	51142181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_51142200_51142400
Isoform_49225_76	chr14	-	172	1	Intergenic	novelGene_3512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAGAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	51161035	51160863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_51160900_51161000
Isoform_49228_14	chr14	-	3623	1	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	0	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168295	51164672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_51164700_51168300
Isoform_4923_131	chr10	-	2931	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	1	7	1	-2	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147654	127132096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
Isoform_49231_32	chr14	-	190	1	Intergenic	novelGene_3513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAATAAATAAGT	1187	False	NA	NA	False	NA	NA	NA	51197756	51197566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_51197600_51197800
Isoform_49235_31	chr14	-	175	1	Intergenic	novelGene_3514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTTTAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	51393692	51393517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_51393500_51393700
Isoform_49236_3	chr14	+	178	1	Intergenic	novelGene_3381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATTAGATTTA	7106	False	NA	NA	False	NA	NA	NA	11568371	11568549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_11568400_11568500
Isoform_49237_8	chr14	+	177	1	Intergenic	novelGene_3515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	52014856	52015033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_52014900_52015000
Isoform_49241_33	chr14	-	165	1	Intergenic	novelGene_3516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGATTATCTGTCG	5707	False	NA	NA	False	NA	NA	NA	52232092	52231927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_52231900_52232100
Isoform_49245_34	chr14	+	158	1	Intergenic	novelGene_3517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	52295002	52295160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_52295000_52295200
Isoform_49246_32	chr14	+	162	1	Intergenic	novelGene_3518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	52298104	52298266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_52298100_52298300
Isoform_49255_13	chr14	+	178	1	Intergenic	novelGene_3519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	52316595	52316773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_52316600_52316800
Isoform_49256_7	chr14	+	204	1	Intergenic	novelGene_3520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	52321092	52321296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_52321100_52321300
Isoform_49258_10	chr6	-	177	1	Intergenic	novelGene_9731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAATTA	1625	False	NA	NA	False	NA	NA	NA	148813303	148813126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_148813100_148813300
Isoform_49259_8	chr14	+	3861	1	Antisense	novelGene_ENSMUSG00000060373.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	7435	False	NA	NA	False	NA	NA	NA	52335544	52339405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_52335500_52339400
Isoform_49260_281	chr14	+	180	1	Intergenic	novelGene_3521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTATTTAATGTAT	NA	False	NA	-1	True	NA	NA	NA	52350429	52350609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_52350400_52350600
Isoform_49262_13	chr14	-	157	1	Intergenic	novelGene_3522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	6534	False	NA	NA	False	NA	NA	NA	52363174	52363017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_52363000_52363200
Isoform_49263_97	chr14	-	172	1	Intergenic	novelGene_3523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTGACTCCTGGG	2099	False	NA	NA	False	NA	NA	NA	52367609	52367437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_52367400_52367600
Isoform_49264_60	chr14	+	176	1	Intergenic	novelGene_3524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	52376546	52376722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_52376500_52376700
Isoform_49265_3	chr14	+	2192	1	NIC	ENSMUSG00000057132.17	novel	5380	25	NA	NA	-4310	2651	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	52378510	52380702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_52378500_52380700
Isoform_49279_3	chr14	-	353	1	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	39068	1	4092	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTCTTCCTATGTTCT	NA	False	NA	-10	True	AATAAA	-16	NA	52435961	52435608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_52435600_52436000
Isoform_49281_41	chr14	+	177	1	Intergenic	novelGene_3525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	52507322	52507499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_52507300_52507500
Isoform_49283_7	chr14	+	163	1	Antisense	novelGene_ENSMUSG00000022160.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52534430	52534593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_52534400_52534600
Isoform_49284_5	chr14	+	180	1	Antisense	novelGene_ENSMUSG00000022160.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGTGCTGGGA	NA	False	NA	NA	False	NA	NA	NA	52541199	52541379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_52541200_52541400
Isoform_49285_14	chr14	-	221	1	Intergenic	novelGene_3526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	52548126	52547905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_52547900_52548100
Isoform_49286_52	chr14	-	167	1	Intergenic	novelGene_3527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTTACAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	52555169	52555002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_52555000_52555200
Isoform_49287_11	chr14	-	177	1	Intergenic	novelGene_3528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACTTCTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	52574983	52574806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_52574800_52575000
Isoform_49290_69	chr14	-	1750	1	FSM	ENSMUSG00000115785.2	ENSMUST00000228343.2	1768	1	0	18	0	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCATACAAAAAAAAATAATA	NA	False	NA	NA	False	AATAAA	-16	NA	53100209	53098459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_53098500_53100200
Isoform_49299_4	chr14	+	283	1	Intergenic	novelGene_3529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAACACCAGATGGA	2590	False	NA	NA	False	ATTAAA	-20	NA	54467087	54467370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54467100_54467400
Isoform_49302_9	chr14	+	176	1	Intergenic	novelGene_3369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAATCTCTTCGTT	NA	False	NA	NA	False	NA	NA	NA	3994115	3994291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_3994100_3994300
Isoform_49304_38	chr14	+	179	1	Intergenic	novelGene_3530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATATATATAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	54529197	54529376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54529200_54529400
Isoform_49309_30	chr14	+	186	1	Intergenic	novelGene_3531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATCACTACTGGG	1261	False	NA	NA	False	NA	NA	NA	54626747	54626933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54626700_54626900
Isoform_49310_8	chr14	+	173	1	Intergenic	novelGene_3532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATCATGTACC	NA	False	NA	NA	False	NA	NA	NA	54637268	54637441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54637300_54637400
Isoform_49314_645	chr14	+	1208	1	FSM	ENSMUSG00000045799.7	ENSMUST00000052615.7	336	1	-179	-693	-179	693	mono-exon	FALSE	NA	NA	NA	NA	NA	645	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATATTTT	NA	False	NA	NA	False	AATAAA	-33	NA	13669258	13670466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_13669300_13670500
Isoform_49330_3	chr14	+	175	1	Intergenic	novelGene_3533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCATGTATCA	NA	False	NA	NA	False	NA	NA	NA	54637463	54637638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54637500_54637600
Isoform_49331_54	chr14	+	170	1	Intergenic	novelGene_3534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54660055	54660225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54660100_54660200
Isoform_49336_3	chr14	+	170	1	Intergenic	novelGene_3535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTTAAAAATTTTC	NA	False	NA	NA	False	NA	NA	NA	54711579	54711749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54711600_54711700
Isoform_49337_7	chr14	+	176	1	Intergenic	novelGene_3536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATATATTGACT	NA	False	NA	NA	False	NA	NA	NA	54745635	54745811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54745600_54745800
Isoform_49338_8	chr14	+	168	1	Intergenic	novelGene_3537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54775859	54776027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54775900_54776000
Isoform_49339_9	chr7	-	159	1	Intergenic	novelGene_10223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	100403690	100403531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_100403500_100403700
Isoform_49340_7	chr14	+	174	1	Intergenic	novelGene_3538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCGAGGAGGGGGCC	NA	False	NA	NA	False	NA	NA	NA	54777768	54777942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_54777800_54777900
Isoform_49352_7	chr14	-	172	1	Intergenic	novelGene_3539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCTTTTAAAAAGAGAG	8685	False	NA	NA	False	NA	NA	NA	54898902	54898730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_54898700_54898900
Isoform_49356_50	chr14	-	284	1	Intergenic	novelGene_3540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGGGGCAGGTGTTGA	9241	False	NA	NA	False	AATAAA	-25	NA	55083150	55082866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_55082900_55083200
Isoform_49357_13	chr16	+	179	1	Intergenic	novelGene_4324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15401554	15401733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_15401600_15401700
Isoform_49359_45	chr14	-	177	1	Intergenic	novelGene_3541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTATACACTTG	NA	False	NA	NA	False	NA	NA	NA	55117015	55116838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_55116800_55117000
Isoform_4936_4	chr10	-	3169	8	ISM	ENSMUSG00000025407.8	ENSMUST00000026474.5	4057	13	4754	-3	-165	3	3prime_fragment	FALSE	canonical	2	12	junction_7	7.54848275064166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTCATGTTGGGGAG	7492	False	NA	NA	False	AATAAA	-20	NA	127173089	127165747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881
Isoform_49373_9	chr14	-	174	1	Intergenic	novelGene_3542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACACAGCC	NA	False	NA	NA	False	NA	NA	NA	55283437	55283263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_55283300_55283400
Isoform_49374_4	chr14	-	816	1	Intergenic	novelGene_3370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4006104	4005288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_4005300_4006100
Isoform_49375_26	chr14	+	2555	1	Antisense	novelGene_ENSMUSG00000040721.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55326835	55329390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_55326800_55329400
Isoform_49377_5	chr14	+	3892	1	NIC	ENSMUSG00000100162.3	novel	4242	7	NA	NA	39600	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGGGTCTTTATTTCCG	NA	False	NA	5	True	AATAAA	-16	NA	55332549	55336441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_55332500_55336400
Isoform_49378_94	chr2	-	177	1	Intergenic	novelGene_6825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	170041612	170041435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_170041400_170041600
Isoform_49379_28	chr14	-	168	1	Intergenic	novelGene_3544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAACAAAATGT	NA	False	NA	NA	False	NA	NA	NA	55375746	55375578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_55375600_55375700
Isoform_4938_13	chr10	-	4047	13	FSM	ENSMUSG00000025407.8	ENSMUST00000026474.5	4057	13	9	1	9	-1	multi-exon	FALSE	canonical	2	10	junction_12	8.16964231503164	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCACCTGTCATGTTGG	2747	False	NA	NA	False	AATAAA	-16	NA	127177834	127165751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
Isoform_49380_5	chr14	-	206	1	Intergenic	novelGene_3545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	55392213	55392007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_55392000_55392200
Isoform_49382_40	chr14	-	179	1	Intergenic	novelGene_3546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAACAGATT	3113	False	NA	NA	False	NA	NA	NA	55678684	55678505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_55678500_55678700
Isoform_49383_4	chr14	+	156	1	Intergenic	novelGene_3547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATACATTTAAA	4105	False	NA	NA	False	NA	NA	NA	55772936	55773092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_55772900_55773100
Isoform_4939_4	chr10	-	4155	14	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	10.7955721802147	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATCACCTGTCATG	2747	False	NA	NA	False	AATAAA	-12	NA	127177834	127165755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127174538_127174651_127177073_127177188_127177427
Isoform_49394_17	chr14	+	175	1	Intergenic	novelGene_3548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	55842770	55842945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_55842800_55842900
Isoform_49397_3	chr14	+	2749	1	FSM	ENSMUSG00000115222.2	ENSMUST00000228007.2	2749	1	-3	3	-3	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCCTTGGTCCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	55881057	55883806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_55881100_55883800
Isoform_4940_3	chr10	-	4333	12	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	9	1	intron_retention	FALSE	canonical	2	10	junction_11	7.80972057996892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCACCTGTCATGTTGGGG	2747	False	NA	NA	False	AATAAA	-18	NA	127177834	127165749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
Isoform_49400_16	chr14	-	170	1	Intergenic	novelGene_3549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8877	False	NA	NA	False	NA	NA	NA	55891373	55891203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_55891200_55891400
Isoform_49404_8	chr14	-	176	1	Intergenic	novelGene_3383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATCCCAATTC	NA	False	NA	NA	False	NA	NA	NA	14163023	14162847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_14162800_14163000
Isoform_4941_3	chr10	-	4055	12	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	193	-5	intron_retention	FALSE	canonical	2	10	junction_11	7.80972057996892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATCACCTGTCATG	3019	False	NA	NA	False	AATAAA	-12	NA	127177562	127165755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
Isoform_49410_10	chr14	+	234	1	Intergenic	novelGene_3551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCATATACTAAATAGAT	NA	False	NA	NA	False	CATAAA	-17	NA	56058831	56059065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_56058800_56059100
Isoform_49412_6	chr14	+	227	1	Intergenic	novelGene_3552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTGGCTTCATCAGA	NA	False	NA	NA	False	NA	NA	NA	56074250	56074477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_56074200_56074500
Isoform_49419_3	chr14	+	3857	1	NIC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	1	-7604	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAAAAGAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	56122431	56126288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_56122400_56126300
Isoform_4942_5	chr10	-	2766	2	FSM	ENSMUSG00000047492.6	ENSMUST00000059718.6	5319	2	2552	1	2552	-1	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTGTGTGTTCTT	7998	False	NA	NA	False	NA	NA	NA	127187728	127184726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127186881_127187116
Isoform_49425_44	chr14	-	172	1	Intergenic	novelGene_3553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	56199368	56199196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_56199200_56199400
Isoform_49427_4	chr14	+	245	1	Intergenic	novelGene_3554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	56201346	56201591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_56201300_56201600
Isoform_49430_3	chr14	+	213	1	Intergenic	novelGene_3384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACATCCATTTTCTGCT	NA	False	NA	NA	False	NA	NA	NA	14288454	14288667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_14288500_14288700
Isoform_49433_26	chr14	+	179	1	Intergenic	novelGene_3555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	56777539	56777718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_56777500_56777700
Isoform_49435_17	chr14	-	185	1	Intergenic	novelGene_3556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	56827208	56827023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_56827000_56827200
Isoform_49443_59	chr14	+	155	1	Intergenic	novelGene_3557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAACACAAGGGCT	NA	False	NA	NA	False	NA	NA	NA	56974475	56974630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_56974500_56974600
Isoform_49446_17	chr14	+	2770	1	Intergenic	novelGene_3559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57011630	57014400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_57011600_57014400
Isoform_49450_21	chr14	+	1221	1	Antisense	novelGene_ENSMUSG00000021938.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTCTGCTGTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	57015133	57016354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_57015100_57016400
Isoform_49451_176	chr14	-	231	1	Intergenic	novelGene_3560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGCCTAGGTG	NA	False	NA	NA	False	ATTAAA	-8	NA	57077973	57077742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57077700_57078000
Isoform_49453_4	chr14	-	175	1	Intergenic	novelGene_3561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCTTA	NA	False	NA	NA	False	NA	NA	NA	57114547	57114372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57114400_57114500
Isoform_49455_33	chr14	-	178	1	Intergenic	novelGene_3562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	57134550	57134372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57134400_57134600
Isoform_49456_3	chr14	+	2471	1	ISM	ENSMUSG00000021945.10	ENSMUST00000022511.10	6974	24	72113	299	10378	-299	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAACTCATGTTTTTC	NA	False	NA	33	True	CATAAA	-16	NA	57197388	57199859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_57197400_57199900
Isoform_49457_4	chr14	+	209	1	Intergenic	novelGene_3385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCAAGTTGCCTTTGTTC	1179	False	NA	NA	False	NA	NA	NA	14348295	14348504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_14348300_14348500
Isoform_49458_37	chr14	+	186	1	Intergenic	novelGene_3563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57628439	57628625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_57628400_57628600
Isoform_49460_4	chr14	-	180	1	Intergenic	novelGene_3564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCAAAATAA	NA	False	NA	NA	False	NA	NA	NA	57689053	57688873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57688900_57689100
Isoform_49461_164	chr14	+	179	1	Intergenic	novelGene_3565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57714395	57714574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_57714400_57714600
Isoform_49462_5	chr14	-	177	1	Intergenic	novelGene_3566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCACCTTCCCGTGTAT	NA	False	NA	NA	False	NA	NA	NA	57722961	57722784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57722800_57723000
Isoform_49464_10	chr14	-	1396	1	Antisense	novelGene_ENSMUSG00000050222.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAGTGTGCAAAATAT	NA	False	NA	-4	True	AATAAA	-30	NA	57762970	57761574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_57761600_57763000
Isoform_49466_9	chr14	-	1505	1	Antisense	novelGene_ENSMUSG00000050222.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAGTGTGCAAAATAT	NA	False	NA	-4	True	AATAAA	-30	NA	57763079	57761574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_57761600_57763100
Isoform_49467_3	chr14	-	1846	1	Intergenic	novelGene_3567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGTGGGAAGGAAGTC	NA	False	NA	NA	False	NA	NA	NA	57775910	57774064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57774100_57775900
Isoform_49468_25	chr14	-	177	1	Intergenic	novelGene_3568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGGGGGGGGACTACA	NA	False	NA	NA	False	NA	NA	NA	57785756	57785579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57785600_57785800
Isoform_49469_3	chr14	+	978	1	Intergenic	novelGene_3386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14376729	14377707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_14376700_14377700
Isoform_49470_44	chr14	-	175	1	Intergenic	novelGene_3569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57804692	57804517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57804500_57804700
Isoform_49471_3	chr14	-	485	1	ISM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	87425	0	70652	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTTTGACCATGTG	NA	False	NA	-18	True	ACTAAA	-13	NA	57815462	57814977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_57815000_57815500
Isoform_49474_3	chr14	-	3657	1	ISM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	84253	0	67480	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTTTGACCATGTG	7560	False	NA	-18	True	ACTAAA	-13	NA	57818634	57814977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_57815000_57818600
Isoform_49475_3	chr14	-	3097	1	ISM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	84813	0	68040	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTTTGACCATGTG	8120	False	NA	-18	True	ACTAAA	-13	NA	57818074	57814977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_57815000_57818100
Isoform_49479_4	chr14	-	1844	1	ISM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	85813	253	69040	-253	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGACTTTTAAGTTTT	9120	False	NA	-4	True	ATTAAA	-13	NA	57817074	57815230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_57815200_57817100
Isoform_49480_4	chr14	-	2496	1	ISM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	85161	253	68388	-253	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGACTTTTAAGTTTT	8468	False	NA	-4	True	ATTAAA	-13	NA	57817726	57815230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_57815200_57817700
Isoform_49486_3	chr14	+	155	1	Intergenic	novelGene_3570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATAAAATAAATCTT	872	False	NA	NA	False	NA	NA	NA	57890866	57891021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_57890900_57891000
Isoform_49489_8	chr14	+	224	1	Intergenic	novelGene_3571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTATTTGTTGACCAA	6514	False	NA	NA	False	AAGAAA	-12	NA	57896508	57896732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_57896500_57896700
Isoform_49491_8	chr14	-	214	1	Intergenic	novelGene_3572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTCAATAGAAACAATAGT	NA	False	NA	NA	False	NA	NA	NA	57903809	57903595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57903600_57903800
Isoform_49493_17	chr14	-	188	1	Intergenic	novelGene_3573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTTATTAAAAAAAAAAAAA	8716	False	NA	NA	False	NA	NA	NA	57916758	57916570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_57916600_57916800
Isoform_49494_33	chr14	+	158	1	Intergenic	novelGene_3574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAATCAATAAA	NA	False	NA	NA	False	NA	NA	NA	57970667	57970825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_57970700_57970800
Isoform_49495_539	chr14	-	158	1	Intergenic	novelGene_3575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	539	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	58014813	58014655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_58014700_58014800
Isoform_49496_9	chr14	+	180	1	Intergenic	novelGene_3576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAAATGAATGG	NA	False	NA	NA	False	NA	NA	NA	58020491	58020671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_58020500_58020700
Isoform_49499_69	chr14	+	704	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	-184	-1	12	1	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGTCTCATACGGAAT	NA	False	NA	26	True	ATTAAA	-18	NA	58063702	58064406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_58063700_58064400
Isoform_49502_13	chr14	-	1277	1	Genic_Genomic	ENSMUSG00000021969.9	novel	NA	NA	NA	NA	-8	-25433	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATCGGGCT	NA	False	NA	NA	False	AATACA	-8	NA	58127741	58126464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr14_-_58126500_58127700
Isoform_49504_27	chr14	+	176	1	Intergenic	novelGene_3577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGGGAGT	NA	False	NA	NA	False	NA	NA	NA	58132282	58132458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_58132300_58132500
Isoform_49506_410	chr19	-	175	1	Intergenic	novelGene_5607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5672788	5672613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5672600_5672800
Isoform_49507_103	chr14	-	177	1	Intergenic	novelGene_3579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGGTAGA	NA	False	NA	NA	False	NA	NA	NA	58158119	58157942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_58157900_58158100
Isoform_49509_17	chr14	-	206	1	Intergenic	novelGene_3580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGAAATTTCTATATGTA	NA	False	NA	NA	False	AAAAAG	-9	NA	58164627	58164421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_58164400_58164600
Isoform_49510_6	chr14	-	155	1	Intergenic	novelGene_3581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGACTTGAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	58172257	58172102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_58172100_58172300
Isoform_49512_5	chr14	+	357	1	Intergenic	novelGene_3582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58196288	58196645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_58196300_58196600
Isoform_49513_9	chr14	+	1382	1	NIC	ENSMUSG00000035469.18	novel	765	6	NA	NA	2	-7354	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAATAAATATAAAG	NA	False	NA	NA	False	AAGAAA	-9	NA	59438684	59440066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_59438700_59440100
Isoform_49518_7	chr14	+	830	1	NIC	ENSMUSG00000021981.11	novel	372	4	NA	NA	5	-19858	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	TATAAA	-22	NA	59678434	59679264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_59678400_59679300
Isoform_49519_7	chr14	-	179	1	Intergenic	novelGene_3583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACATGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	59699535	59699356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_59699400_59699500
Isoform_49521_8	chr14	+	169	1	Intergenic	novelGene_3584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTATTTTAAAAAAAAAAAAG	NA	False	NA	3	True	NA	NA	NA	59816626	59816795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_59816600_59816800
Isoform_49532_17	chr14	-	175	1	Intergenic	novelGene_3585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGTTCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	60791001	60790826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_60790800_60791000
Isoform_49535_16	chr14	-	177	1	Intergenic	novelGene_3586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61186776	61186599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_61186600_61186800
Isoform_49537_16	chr14	-	178	1	Intergenic	novelGene_3587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	61336551	61336373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_61336400_61336600
Isoform_49538_36	chr14	-	233	1	Intergenic	novelGene_3588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATTAAATTCAAACTAT	9525	False	NA	NA	False	NA	NA	NA	61361385	61361152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_61361200_61361400
Isoform_49543_3	chr14	+	170	1	Intergenic	novelGene_3589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAATCTTTAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	61481332	61481502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_61481300_61481500
Isoform_49558_30	chr14	+	174	1	Intergenic	novelGene_3591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATCTAGATACTCT	NA	False	NA	NA	False	NA	NA	NA	61703928	61704102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_61703900_61704100
Isoform_49559_3	chr14	-	167	1	Intergenic	novelGene_3592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACACCTAACAAATGAA	NA	False	NA	NA	False	NA	NA	NA	61751664	61751497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_61751500_61751700
Isoform_49560_14	chr14	+	162	1	Intergenic	novelGene_3593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAAAAAGATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	61782349	61782511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_61782300_61782500
Isoform_49561_5	chr14	-	233	1	Intergenic	novelGene_3594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGAAAAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	61832235	61832002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_61832000_61832200
Isoform_49562_25	chr14	+	177	1	Antisense	novelGene_ENSMUSG00000098183.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACTTGGCACA	1891	False	NA	NA	False	NA	NA	NA	61863571	61863748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_61863600_61863700
Isoform_49565_414	chr7	+	176	1	Intergenic	novelGene_10368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	127033109	127033285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127033100_127033300
Isoform_49570_4	chr14	-	227	1	Intergenic	novelGene_3387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTACATTTGTAATTA	NA	False	NA	NA	False	CATAAA	-10	NA	14640850	14640623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_14640600_14640800
Isoform_49572_68	chr14	-	171	1	Intergenic	novelGene_3595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATATGAGGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	63013736	63013565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_63013600_63013700
Isoform_49573_6	chr14	-	175	1	Intergenic	novelGene_3596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCACTCTACCTTC	NA	False	NA	NA	False	NA	NA	NA	63219253	63219078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_63219100_63219300
Isoform_49586_3	chr14	-	1972	1	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	55	-67559	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATTAAATTAAACCA	NA	False	NA	NA	False	TTTAAA	-28	NA	14651761	14649789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_14649800_14651800
Isoform_49587_3	chr14	-	253	1	Intergenic	novelGene_3597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACATTAAGAATAATAGGC	7189	False	NA	NA	False	NA	NA	NA	63492987	63492734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_63492700_63493000
Isoform_49588_6	chr14	+	175	1	Intergenic	novelGene_3598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATAATCAC	NA	False	NA	NA	False	NA	NA	NA	63525992	63526167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_63526000_63526200
Isoform_49596_5	chr14	+	1669	2	Antisense	novelGene_ENSMUSG00000021953.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTCTCTG	NA	False	NA	NA	False	AATATA	-29	NA	63743912	63745603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_63745312_63745333
Isoform_49597_267	chr14	+	981	2	Antisense	novelGene_ENSMUSG00000021953.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTCTCTG	NA	False	NA	NA	False	AATATA	-29	NA	63744600	63745603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_63745312_63745333
Isoform_49600_63	chr14	+	203	1	Intergenic	novelGene_3599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAAGGTGTGGCCTTG	570	False	NA	NA	False	NA	NA	NA	63748890	63749093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_63748900_63749100
Isoform_49601_4	chr14	+	173	1	Intergenic	novelGene_3600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	7690	False	NA	NA	False	NA	NA	NA	63756010	63756183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_63756000_63756200
Isoform_49602_10	chr14	-	178	1	Intergenic	novelGene_3601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	63796860	63796682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_63796700_63796900
Isoform_49604_6	chr14	-	5340	1	Intergenic	novelGene_3602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	1602	False	NA	NA	False	NA	NA	NA	63858678	63853338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_63853300_63858700
Isoform_49605_7	chr14	+	193	1	Intergenic	novelGene_3603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGAAAAGAAAAAA	8611	False	NA	NA	False	NA	NA	NA	64449706	64449899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_64449700_64449900
Isoform_49606_3	chr14	-	2731	1	NIC	ENSMUSG00000054733.10	novel	1860	11	NA	NA	2	12939	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATTAAAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	64678364	64675633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_64675600_64678400
Isoform_49607_3	chr14	+	756	1	Intergenic	novelGene_3604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	1069	False	NA	NA	False	GATAAA	-11	NA	64676504	64677260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_64676500_64677300
Isoform_49608_5	chr14	+	169	1	Intergenic	novelGene_3605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAATTTTAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	64808067	64808236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_64808100_64808200
Isoform_49610_5	chr14	+	2700	1	FSM	ENSMUSG00000092972.3	ENSMUST00000175231.3	87	1	75	-2688	75	2688	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCCATCTATAGTTCTT	NA	False	NA	19	True	AATAAA	-19	NA	64828708	64831408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_64828700_64831400
Isoform_49611_3	chr14	+	196	1	Intergenic	novelGene_3606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGTTAGAAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	64850093	64850289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_64850100_64850300
Isoform_49612_20	chr14	-	174	1	Intergenic	novelGene_3607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAACTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	64859117	64858943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_64858900_64859100
Isoform_49613_67	chr14	-	160	1	Intergenic	novelGene_3608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATCTTTTAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	64869048	64868888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_64868900_64869000
Isoform_49617_9	chr14	-	157	1	Intergenic	novelGene_3609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	65035955	65035798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_65035800_65036000
Isoform_49629_5	chr14	-	3125	1	Intergenic	novelGene_3610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAACAAGAATTATTA	9582	False	NA	NA	False	AATACA	-31	NA	65252858	65249733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_65249700_65252900
Isoform_49632_102	chr14	+	214	1	Intergenic	novelGene_3611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGAGGACCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	65340672	65340886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_65340700_65340900
Isoform_49633_12	chr14	-	201	1	Intergenic	novelGene_3612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGTGTTGGAGCAT	NA	False	NA	NA	False	NA	NA	NA	65344746	65344545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_65344500_65344700
Isoform_49635_3	chr14	+	178	1	Intergenic	novelGene_3613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	65947898	65948076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_65947900_65948100
Isoform_49638_6	chr14	+	179	1	Intergenic	novelGene_3614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATTGGTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	66074262	66074441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_66074300_66074400
Isoform_49639_3	chr14	+	170	1	Intergenic	novelGene_3615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATTTAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	66123351	66123521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_66123400_66123500
Isoform_49640_6	chr14	-	177	1	Intergenic	novelGene_3616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGAACTTTGT	NA	False	NA	NA	False	NA	NA	NA	66129728	66129551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_66129600_66129700
Isoform_49641_16	chr14	+	171	1	Intergenic	novelGene_3617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	66248259	66248430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_66248300_66248400
Isoform_49643_5	chr14	-	171	1	Intergenic	novelGene_3618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGCTGCTCTGGAG	NA	False	NA	NA	False	NA	NA	NA	66313340	66313169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_66313200_66313300
Isoform_49645_148	chr14	+	1053	1	FSM	ENSMUSG00000022043.20	ENSMUST00000223737.2	1057	1	0	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-12	NA	66534514	66535567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_66534500_66535600
Isoform_49650_6	chr14	-	178	1	Intergenic	novelGene_3619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAGATTTGAA	NA	False	NA	NA	False	NA	NA	NA	67189122	67188944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_67188900_67189100
Isoform_49651_9	chr14	+	300	1	Intergenic	novelGene_3620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTTTTAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	67205878	67206178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_67205900_67206200
Isoform_49654_32	chr14	+	2679	1	Intergenic	novelGene_3621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3481	False	NA	NA	False	NA	NA	NA	67241207	67243886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_67241200_67243900
Isoform_49656_9	chr14	+	1317	1	Antisense	novelGene_ENSMUSG00000022052.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	979	False	NA	NA	False	NA	NA	NA	67298971	67300288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_67299000_67300300
Isoform_49658_5	chr14	+	158	1	Intergenic	novelGene_3622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	67459646	67459804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_67459600_67459800
Isoform_49659_26	chr14	-	176	1	Intergenic	novelGene_3623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATAAAGGCTATG	NA	False	NA	NA	False	NA	NA	NA	67603818	67603642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_67603600_67603800
Isoform_49660_29	chr18	+	179	1	Intergenic	novelGene_5437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGG	NA	False	NA	NA	False	NA	NA	NA	54941823	54942002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_54941800_54942000
Isoform_49661_5	chr14	+	1252	1	Intergenic	novelGene_3625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATTACCTATCTGATA	NA	False	NA	NA	False	NA	NA	NA	67926295	67927547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_67926300_67927500
Isoform_49662_111	chr14	+	1919	1	Antisense	novelGene_ENSMUSG00000048922.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67931152	67933071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_67931200_67933100
Isoform_49663_13	chr14	+	3567	1	Antisense	novelGene_ENSMUSG00000048922.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	67938386	67941953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_67938400_67942000
Isoform_49665_20	chr14	+	179	1	Intergenic	novelGene_3626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAACTAA	4766	False	NA	NA	False	NA	NA	NA	68091480	68091659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_68091500_68091700
Isoform_49666_4	chr14	-	207	1	Intergenic	novelGene_3627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAGGCAATAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	68224911	68224704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_68224700_68224900
Isoform_49667_8	chr14	-	171	1	Intergenic	novelGene_3628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTTAAAAAAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	68252708	68252537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_68252500_68252700
Isoform_49668_5	chr14	-	2239	1	Intergenic	novelGene_3629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGCTGTTACAAGTAT	NA	False	NA	NA	False	AATAAA	-22	NA	68274536	68272297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_68272300_68274500
Isoform_49669_31	chr14	-	175	1	Intergenic	novelGene_3630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAGAAGGTCA	NA	False	NA	NA	False	NA	NA	NA	68327259	68327084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_68327100_68327300
Isoform_49670_79	chr14	+	176	1	Intergenic	novelGene_3631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGTAACTTAACGGA	NA	False	NA	NA	False	NA	NA	NA	68574577	68574753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_68574600_68574800
Isoform_49671_4	chr14	+	5238	2	Antisense	novelGene_ENSMUSG00000034248.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAAGCG	NA	False	NA	NA	False	NA	NA	NA	69481430	69486693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_69482969_69482993
Isoform_49673_10	chr14	+	182	1	Intergenic	novelGene_3632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGCTTTAGTACCACC	NA	False	NA	NA	False	NA	NA	NA	69889953	69890135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_69890000_69890100
Isoform_49675_3	chr14	+	174	1	Intergenic	novelGene_3633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	69993210	69993384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_69993200_69993400
Isoform_49677_10	chr14	+	517	1	Antisense	novelGene_ENSMUSG00000022075.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	AAAAAG	-33	NA	70042504	70043021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_70042500_70043000
Isoform_49679_7	chr14	-	175	1	Intergenic	novelGene_3634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGTTTGGGAA	NA	False	NA	NA	False	NA	NA	NA	70385897	70385722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_70385700_70385900
Isoform_49680_9	chr14	+	176	1	Intergenic	novelGene_3635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	70406377	70406553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_70406400_70406600
Isoform_49682_85	chr14	+	174	1	Intergenic	novelGene_3636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	70427590	70427764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_70427600_70427800
Isoform_49683_4	chr14	-	2962	1	Genic_Genomic	ENSMUSG00000022092.12	novel	NA	NA	NA	NA	-24	-63557	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAGAAAAAGAAAAAGAAA	9162	False	NA	NA	False	NA	NA	NA	70526944	70523982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr14_-_70524000_70526900
Isoform_49684_175	chr14	-	172	1	Intergenic	novelGene_3637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	7320	False	NA	NA	False	NA	NA	NA	70628637	70628465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_70628500_70628600
Isoform_49691_562	chr14	+	175	1	Intergenic	novelGene_3638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	562	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAATAT	NA	False	NA	NA	False	NA	NA	NA	70998295	70998470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_70998300_70998500
Isoform_49692_136	chr14	-	176	1	Intergenic	novelGene_3639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	71008523	71008347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_71008300_71008500
Isoform_49693_24	chr2	-	177	1	Intergenic	novelGene_6660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAAAAACAT	2580	False	NA	NA	False	NA	NA	NA	154896571	154896394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_154896400_154896600
Isoform_49696_4	chr14	-	171	1	Intergenic	novelGene_3642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATATCCGCTCTC	5855	False	NA	NA	False	NA	NA	NA	73352558	73352387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_73352400_73352600
Isoform_49697_18	chr14	-	1555	1	Intergenic	novelGene_3644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	73426368	73424813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_73424800_73426400
Isoform_49700_4	chr14	-	1887	1	Intergenic	novelGene_3643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	73426695	73424808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_73424800_73426700
Isoform_49702_15	chr14	-	1810	1	Intergenic	novelGene_3645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTATGAAATTGCCTTAG	NA	False	NA	NA	False	NA	NA	NA	73426629	73424819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_73424800_73426600
Isoform_49707_8	chr14	+	1781	1	FSM	ENSMUSG00000033446.8	ENSMUST00000044405.8	5400	1	107	3512	107	-3512	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGCCATTTTACTTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	73475441	73477222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_73475400_73477200
Isoform_49711_7	chr14	+	248	1	Intergenic	novelGene_3646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTATATTAAAACAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-42	NA	73681855	73682103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_73681900_73682100
Isoform_49712_5	chr14	+	1450	1	FSM	ENSMUSG00000022109.7	ENSMUST00000226256.2	1455	1	-7	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTTGATACTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73747464	73748914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_73747500_73748900
Isoform_49713_163	chr14	-	176	1	Intergenic	novelGene_3647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	73820499	73820323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_73820300_73820500
Isoform_49715_23	chr14	+	176	1	Intergenic	novelGene_3648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTAGAGGGTGCC	NA	False	NA	NA	False	NA	NA	NA	73923064	73923240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_73923100_73923200
Isoform_49723_11	chr14	-	1196	1	FSM	ENSMUSG00000057886.6	ENSMUST00000181108.2	552	1	462	-1106	462	1106	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCCTCCCAGAAATGGT	NA	False	NA	NA	False	AATAAA	-42	NA	74192529	74191333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_74191300_74192500
Isoform_49728_6	chr14	-	1625	1	FSM	ENSMUSG00000057886.6	ENSMUST00000181108.2	552	1	33	-1106	33	1106	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCCTCCCAGAAATGGT	NA	False	NA	NA	False	AATAAA	-42	NA	74192958	74191333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_74191300_74193000
Isoform_49731_3	chr14	-	258	1	Intergenic	novelGene_3649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTGCAAGGCCCTGG	NA	False	NA	NA	False	NA	NA	NA	75145808	75145550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_75145600_75145800
Isoform_49732_227	chr19	-	176	1	Intergenic	novelGene_5605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5493531	5493355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5493400_5493500
Isoform_49734_4	chr14	-	177	1	Intergenic	novelGene_3650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACATTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	75993142	75992965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_75993000_75993100
Isoform_49738_5	chr14	+	200	1	Intergenic	novelGene_3651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAACCATCAGGGGC	NA	False	NA	NA	False	NA	NA	NA	76001849	76002049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_76001800_76002000
Isoform_49741_20	chr14	+	173	1	Intergenic	novelGene_3652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTGGTTTTTCGAG	NA	False	NA	NA	False	NA	NA	NA	76068556	76068729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_76068600_76068700
Isoform_49742_5	chr14	-	2093	1	Genic_Genomic	ENSMUSG00000085829.2	novel	NA	NA	NA	NA	-976	-469	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAATTAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76083380	76081287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr14_-_76081300_76083400
Isoform_49744_134	chr14	+	182	1	Intergenic	novelGene_3653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	76097989	76098171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_76098000_76098200
Isoform_49745_39	chr14	-	172	1	Intergenic	novelGene_3654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGCGTTTATAAG	NA	False	NA	NA	False	NA	NA	NA	76185920	76185748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_76185700_76185900
Isoform_49746_8	chr14	+	2498	1	Intergenic	novelGene_3655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76235133	76237631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_76235100_76237600
Isoform_49748_4	chr14	-	150	1	Intergenic	novelGene_3656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCATAGAGTCAATGCA	NA	False	NA	NA	False	NA	NA	NA	76279401	76279251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_76279300_76279400
Isoform_49749_39	chr14	+	167	1	Intergenic	novelGene_3657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76375687	76375854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_76375700_76375900
Isoform_4975_939	chr10	-	2043	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	1	194	1	-178	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358254	127353185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
Isoform_49750_13	chr14	-	175	1	Intergenic	novelGene_3658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATTAGGA	NA	False	NA	NA	False	NA	NA	NA	76379689	76379514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_76379500_76379700
Isoform_49752_23	chr14	-	530	1	FSM	ENSMUSG00000095427.3	ENSMUST00000095471.6	855	1	368	-43	368	43	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	AATAAA	-17	NA	76474617	76474087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_76474100_76474600
Isoform_49753_3	chr17	-	327	1	FSM	ENSMUSG00000118161.2	ENSMUST00000236305.2	882	1	596	-41	596	41	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAGAA	7875	False	NA	NA	False	AATAAA	-18	NA	31863157	31862830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31862800_31863200
Isoform_49755_3	chr14	+	173	1	Intergenic	novelGene_3659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAGGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	76526150	76526323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_76526200_76526300
Isoform_49756_82	chr14	-	176	1	Intergenic	novelGene_3388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAATGCGCCA	NA	False	NA	NA	False	NA	NA	NA	18447082	18446906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_18446900_18447100
Isoform_49759_4	chr14	-	1463	1	Intergenic	novelGene_3660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	1370	False	NA	NA	False	NA	NA	NA	76672484	76671021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_76671000_76672500
Isoform_4976_227	chr10	-	2090	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	-46	194	12	-178	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358301	127353185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
Isoform_49761_3	chr14	-	1778	2	Antisense	novelGene_ENSMUSG00000022010.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACAGAAGAAACATGGTA	NA	False	NA	NA	False	AAAAAG	-21	NA	76732490	76730682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_76731465_76731494
Isoform_49777_3	chr14	+	2236	1	Antisense	novelGene_ENSMUSG00000052584.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTGTCTGTGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	76793868	76796104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_76793900_76796100
Isoform_49778_6	chr14	+	1772	1	FSM	ENSMUSG00000101009.7	ENSMUST00000185809.2	2252	1	477	3	402	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	76915495	76917267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_76915500_76917300
Isoform_49779_15	chr14	-	189	1	Intergenic	novelGene_3662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGCATCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77229697	77229508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_77229500_77229700
Isoform_4978_113	chr10	-	2210	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.696672676091	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	-4	True	AATGAA	-16	NA	127358254	127352990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127353627_127353654_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
Isoform_49781_6	chr15	-	192	1	FSM	ENSMUSG00000085442.2	ENSMUST00000148102.2	466	1	324	-50	324	50	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	81	False	NA	NA	False	AATATA	-16	NA	37943712	37943520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_37943500_37943700
Isoform_49783_27	chr14	-	177	1	Intergenic	novelGene_3663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	9525	False	NA	NA	False	NA	NA	NA	77726082	77725905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_77725900_77726100
Isoform_49784_14	chr14	-	178	1	Intergenic	novelGene_3664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTGAGTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	77775972	77775794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_77775800_77776000
Isoform_49785_16	chr14	+	1282	1	Antisense	novelGene_ENSMUSG00002076975.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	77777179	77778461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_77777200_77778500
Isoform_49786_271	chr14	-	166	1	Intergenic	novelGene_3665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCCCCATA	NA	False	NA	NA	False	NA	NA	NA	77811152	77810986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_77811000_77811200
Isoform_49787_6	chr14	-	674	1	NIC	ENSMUSG00000022013.5	novel	674	5	NA	NA	-7	-47913	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAACAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	78112373	78111699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_78111700_78112400
Isoform_49788_5	chr6	+	177	1	Intergenic	novelGene_9660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACTTTTAA	7701	False	NA	NA	False	NA	NA	NA	126947699	126947876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_126947700_126947900
Isoform_4979_224	chr10	-	1708	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.696672676091	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTAGCTGAGATTTC	NA	False	NA	-13	True	CATAAA	-11	NA	127358254	127353492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127353627_127353654_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
Isoform_49801_8	chr8	+	177	1	Intergenic	novelGene_10719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	71981955	71982132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_71982000_71982100
Isoform_49802_73	chr14	+	182	1	Intergenic	novelGene_3666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	1652	False	NA	NA	False	NA	NA	NA	79518222	79518404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_79518200_79518400
Isoform_49803_10	chr14	+	170	1	Intergenic	novelGene_3667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAATCTTTTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	79560503	79560673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_79560500_79560700
Isoform_49806_8	chr14	-	192	1	Intergenic	novelGene_3668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGCACTCTAAAACATAG	NA	False	NA	NA	False	NA	NA	NA	79609442	79609250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_79609200_79609400
Isoform_49809_19	chr14	-	199	1	Intergenic	novelGene_3669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAATGGGATTGAAGGT	NA	False	NA	NA	False	AATAAA	-16	NA	79620634	79620435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_79620400_79620600
Isoform_49810_34	chr14	-	174	1	Intergenic	novelGene_3670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCATTCATTCTCCT	NA	False	NA	NA	False	NA	NA	NA	79625934	79625760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_79625800_79625900
Isoform_49811_39	chr14	+	175	1	Intergenic	novelGene_3671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTCTCTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	79632551	79632726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_79632600_79632700
Isoform_49813_11	chr14	-	156	1	Intergenic	novelGene_3672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAACTTTA	7592	False	NA	NA	False	NA	NA	NA	79634553	79634397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_79634400_79634600
Isoform_49815_15	chr14	+	4605	1	FSM	ENSMUSG00000043881.10	ENSMUST00000061222.9	4526	1	-79	0	-79	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTCCTGGCTTTATG	3130	False	NA	NA	False	AATAAA	-15	NA	79663871	79668476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_79663900_79668500
Isoform_49819_3	chr14	+	177	1	Intergenic	novelGene_3673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	7712	False	NA	NA	False	NA	NA	NA	79712019	79712196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_79712000_79712200
Isoform_49820_42	chr14	+	172	1	Intergenic	novelGene_3674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAACCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	79729924	79730096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_79729900_79730100
Isoform_49821_4	chr14	-	215	1	Intergenic	novelGene_3675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATAAGCAAATGG	NA	False	NA	NA	False	NA	NA	NA	79751704	79751489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_79751500_79751700
Isoform_49823_19	chr14	-	414	1	Intergenic	novelGene_3676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTTAATTAATACTAAC	NA	False	NA	NA	False	NA	NA	NA	79828516	79828102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_79828100_79828500
Isoform_49826_11	chr14	-	178	1	Intergenic	novelGene_3678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGACTTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	81100377	81100199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_81100200_81100400
Isoform_49828_5	chr14	+	178	1	Intergenic	novelGene_3679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCACACAACACC	NA	False	NA	NA	False	NA	NA	NA	81711413	81711591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_81711400_81711600
Isoform_49829_55	chr14	+	174	1	Intergenic	novelGene_3680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTGATCTGCACT	NA	False	NA	NA	False	NA	NA	NA	81881953	81882127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_81882000_81882100
Isoform_49830_4	chr14	-	6658	1	Intergenic	novelGene_3681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGGCTTAACTTGTGG	NA	False	NA	NA	False	NA	NA	NA	82034996	82028338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_82028300_82035000
Isoform_49838_63	chr14	-	176	1	Genic_Genomic	ENSMUSG00000115664.2	novel	NA	NA	NA	NA	6034	67	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	86640501	86640325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr14_-_86640300_86640500
Isoform_49839_7	chr14	+	178	1	Intergenic	novelGene_3682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	86799135	86799313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_86799100_86799300
Isoform_49840_3	chr14	+	1901	1	Intergenic	novelGene_3683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87125621	87127522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_87125600_87127500
Isoform_49841_3	chr14	-	2719	1	Intergenic	novelGene_3389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19826588	19823869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_19823900_19826600
Isoform_49842_6	chr14	+	174	1	Intergenic	novelGene_3684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAGAAGAGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	87377227	87377401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_87377200_87377400
Isoform_49843_22	chr14	+	176	1	Intergenic	novelGene_3685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTATGTTTG	NA	False	NA	NA	False	NA	NA	NA	87652437	87652613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_87652400_87652600
Isoform_49844_163	chr14	+	174	1	Intergenic	novelGene_3686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	87716723	87716897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_87716700_87716900
Isoform_49846_6	chr14	-	155	1	FSM	ENSMUSG00000062611.5	ENSMUST00000074245.5	792	1	688	-51	688	51	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAATTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	88360556	88360401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_88360400_88360600
Isoform_49850_8	chr14	+	664	1	Antisense	novelGene_ENSMUSG00000062611.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATCAAAATTTCTAAATC	NA	False	NA	NA	False	NA	NA	NA	88360605	88361269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_88360600_88361300
Isoform_49851_3	chr14	-	305	1	FSM	ENSMUSG00000062611.5	ENSMUST00000074245.5	792	1	-25	512	-25	-512	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTCTGACTAACTTC	NA	False	NA	NA	False	NA	NA	NA	88361269	88360964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_88361000_88361300
Isoform_49852_11	chr14	-	177	1	Intergenic	novelGene_3687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAAACTTTTG	NA	False	NA	NA	False	NA	NA	NA	89628026	89627849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_89627800_89628000
Isoform_49855_14	chr14	-	2483	1	NIC	ENSMUSG00000115313.2	novel	429	3	NA	NA	656	-17991	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGCAGGAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90322672	90320189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_90320200_90322700
Isoform_49856_3	chr14	-	1013	1	Intergenic	novelGene_3688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATGGAAAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	93452652	93451639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_93451600_93452700
Isoform_49857_3	chr14	-	1086	1	Intergenic	novelGene_3689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATGGAAAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	93452725	93451639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_93451600_93452700
Isoform_4987_710	chr10	-	2099	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	12	178	12	-178	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358301	127353185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
Isoform_49872_8	chr14	+	182	1	Intergenic	novelGene_3690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTACAGCTTGAATTG	NA	False	NA	NA	False	NA	NA	NA	95788881	95789063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_95788900_95789100
Isoform_49874_26	chr14	-	176	1	Intergenic	novelGene_3691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAAGCAACAT	NA	False	NA	NA	False	NA	NA	NA	96425469	96425293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_96425300_96425500
Isoform_49875_40	chr14	+	176	1	Intergenic	novelGene_3692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAGATC	NA	False	NA	NA	False	NA	NA	NA	99186988	99187164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_99187000_99187200
Isoform_49879_45	chr14	-	249	1	FSM	ENSMUSG00000060377.5	ENSMUST00000081987.5	449	1	184	16	184	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTACCTGAAAAAAATTAT	NA	False	NA	-17	True	ATTAAA	-11	NA	99231570	99231321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_99231300_99231600
Isoform_49881_22	chr14	+	210	1	Intergenic	novelGene_3693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTCCGGCATAGAAAAC	6770	False	NA	NA	False	NA	NA	NA	99232939	99233149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_99232900_99233100
Isoform_49886_11	chr14	-	198	1	Intergenic	novelGene_3694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCCTGACTAAGACACT	NA	False	NA	NA	False	NA	NA	NA	99300192	99299994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_99300000_99300200
Isoform_4989_2784	chr10	-	2040	13	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	578.432940509673	2784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358270	127353185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127353627_127353654_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
Isoform_49892_52	chr3	-	177	1	Intergenic	novelGene_7355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	137581224	137581047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_137581000_137581200
Isoform_49893_15	chr14	-	174	1	Intergenic	novelGene_3695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATATAAAAAGAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	99456643	99456469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_99456500_99456600
Isoform_49894_4	chr14	+	260	1	Intergenic	novelGene_3696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTGCGCAAACTCCT	NA	False	NA	NA	False	NA	NA	NA	99458539	99458799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_99458500_99458800
Isoform_49897_3	chr14	+	219	1	Intergenic	novelGene_3697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTTTGCTGGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	99487137	99487356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_99487100_99487400
Isoform_49898_3	chr14	+	188	1	Intergenic	novelGene_3698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATGTAGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	99530172	99530360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_99530200_99530400
Isoform_4990_80	chr10	-	2294	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	12	-17	12	1	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	-4	True	AATGAA	-16	NA	127358301	127352990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
Isoform_4991_346	chr10	-	2219	13	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	578.432940509673	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	-4	True	AATGAA	-16	NA	127358254	127352990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127353627_127353654_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
Isoform_49922_109	chrY	+	172	1	Intergenic	novelGene_12341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTTTAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	41547625	41547797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrY_+_41547600_41547800
Isoform_49924_22	chr14	+	175	1	Intergenic	novelGene_3700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	99624190	99624365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_99624200_99624400
Isoform_49926_11	chr14	-	175	1	Intergenic	novelGene_3701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCACTGAATGA	NA	False	NA	NA	False	NA	NA	NA	99782621	99782446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_99782400_99782600
Isoform_49927_31	chr14	+	175	1	Intergenic	novelGene_3702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGATATG	NA	False	NA	NA	False	NA	NA	NA	99792524	99792699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_99792500_99792700
Isoform_49928_3	chr14	+	178	1	Intergenic	novelGene_3703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAACTGAGATAGGA	NA	False	NA	NA	False	NA	NA	NA	99921851	99922029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_99921900_99922000
Isoform_49929_6	chr14	-	152	1	Intergenic	novelGene_3704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACAAGTGT	NA	False	NA	NA	False	NA	NA	NA	100129354	100129202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_100129200_100129400
Isoform_49930_4	chr14	+	1004	2	Antisense	novelGene_ENSMUSG00000072294.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100161852	100162878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_100162402_100162423
Isoform_49932_334	chr14	+	176	1	Intergenic	novelGene_3705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGACACCCTGA	NA	False	NA	NA	False	NA	NA	NA	101857573	101857749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_101857600_101857700
Isoform_49933_5	chr14	+	1548	1	Intergenic	novelGene_3706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAACAAAAAAGCT	2983	False	NA	NA	False	NA	NA	NA	101872408	101873956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_101872400_101874000
Isoform_49934_8	chr14	-	289	1	Intergenic	novelGene_3707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGTGGGTAATTGTTA	NA	False	NA	NA	False	NA	NA	NA	101908375	101908086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_101908100_101908400
Isoform_49935_16	chr14	-	176	1	Intergenic	novelGene_3708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGACTGAGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	101908375	101908199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_101908200_101908400
Isoform_49937_3	chr14	-	2258	1	Intergenic	novelGene_3709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGGTCCAGGTCTAC	6918	False	NA	NA	False	NA	NA	NA	102065418	102063160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_102063200_102065400
Isoform_49939_11	chr14	-	814	1	FSM	ENSMUSG00000115584.2	ENSMUST00000226515.2	773	1	-4	-37	-4	37	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-44	NA	102220203	102219389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_102219400_102220200
Isoform_49941_4	chr14	-	210	1	Intergenic	novelGene_3711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCAGGTTCCATTGTGG	NA	False	NA	NA	False	NA	NA	NA	103312027	103311817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_103311800_103312000
Isoform_49944_70	chr14	+	175	1	Intergenic	novelGene_3390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	20022975	20023150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_20023000_20023200
Isoform_49945_6	chr14	+	864	1	Antisense	novelGene_ENSMUSG00000022124.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATTTGCATTTCCATTT	NA	False	NA	NA	False	AATAAA	-42	NA	103336518	103337382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_103336500_103337400
Isoform_49946_54	chr14	-	596	1	NIC	ENSMUSG00000033004.17	novel	3495	3	NA	NA	4	-34520	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTCCCGGGCGCCCTT	NA	False	NA	NA	False	NA	NA	NA	103584246	103583650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_-_103583600_103584200
Isoform_49948_21	chr14	-	176	1	Intergenic	novelGene_3712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATGGATATTTGGAG	NA	False	NA	NA	False	NA	NA	NA	103916546	103916370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_103916400_103916500
Isoform_49949_17	chr14	-	178	1	Intergenic	novelGene_3713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	103948025	103947847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_103947800_103948000
Isoform_49951_12	chr14	-	177	1	Intergenic	novelGene_3391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	20071023	20070846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_20070800_20071000
Isoform_49952_6	chr14	-	173	1	Intergenic	novelGene_3714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAGCTAATCATTTT	NA	False	NA	NA	False	NA	NA	NA	104793853	104793680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_104793700_104793900
Isoform_49955_12	chr14	-	2911	1	ISM	ENSMUSG00000022119.16	ENSMUST00000172122.8	3664	6	20672	4	20672	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTTAATGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	105347101	105344190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_-_105344200_105347100
Isoform_49959_3	chr14	+	3372	1	Intergenic	novelGene_3715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105372442	105375814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_105372400_105375800
Isoform_49961_795	chr14	+	399	1	FSM	ENSMUSG00000060143.8	ENSMUST00000227553.2	383	1	0	-16	0	16	mono-exon	FALSE	NA	NA	NA	NA	NA	795	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACTGCAAGCATGCA	NA	False	NA	NA	False	AATAAA	-37	NA	105919262	105919661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_105919300_105919700
Isoform_49967_4	chr14	+	177	1	Antisense	novelGene_ENSMUSG00000022114.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8944	False	NA	NA	False	NA	NA	NA	106129853	106130030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_106129900_106130000
Isoform_49969_3	chr14	-	2873	1	Genic_Genomic	ENSMUSG00000022114.6	novel	NA	NA	NA	NA	-313	-2313	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACTTGAC	NA	False	NA	NA	False	AAAAAG	-40	NA	106134566	106131693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr14_-_106131700_106134600
Isoform_49972_17	chr14	+	3050	1	FSM	ENSMUSG00000022113.7	ENSMUST00000022708.7	3075	1	28	-3	27	3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACATGCTTATATTAT	NA	False	NA	NA	False	AATAAA	-18	NA	106343659	106346709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_106343700_106346700
Isoform_49974_11	chr14	+	165	1	Intergenic	novelGene_3716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	109069023	109069188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_109069000_109069200
Isoform_49980_488	chr14	-	5237	1	Intergenic	novelGene_3718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	112608908	112603671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_112603700_112608900
Isoform_49982_47	chr14	-	5283	1	Intergenic	novelGene_3717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCTTGGCTACATTTCT	NA	False	NA	NA	False	NA	NA	NA	112608950	112603667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_112603700_112609000
Isoform_50_5	ERCC-00028	+	1119	1	FSM	ERCC-00028A	DQ459419	1120	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	C	NA	False	NA	NA	False	NA	NA	NA	0	1119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00028_+_0_1100
Isoform_50004_473	chr14	-	172	1	Intergenic	novelGene_3719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAAAACAAAACCT	NA	False	NA	NA	False	NA	NA	NA	112770749	112770577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_112770600_112770700
Isoform_50005_10	chr14	-	162	1	Intergenic	novelGene_3720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	113332175	113332013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_113332000_113332200
Isoform_50008_1528	chr14	+	2100	1	FSM	ENSMUSG00000058126.8	ENSMUST00000072359.8	2147	1	2	45	2	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	1528	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GATCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	113552041	113554141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_113552000_113554100
Isoform_50022_4	chr14	-	179	1	Intergenic	novelGene_3721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGGTCTATG	NA	False	NA	NA	False	NA	NA	NA	114184554	114184375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_114184400_114184600
Isoform_50024_6	chr14	-	168	1	Intergenic	novelGene_3722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	114772206	114772038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_114772000_114772200
Isoform_50027_11	chr14	+	2228	1	FSM	ENSMUSG00000076062.3	ENSMUST00000102108.3	80	1	73	-2221	73	2221	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGTATCTTGTTTTT	NA	False	NA	7	True	AATAAA	-19	NA	115281931	115284159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_115281900_115284200
Isoform_50028_60	chr14	+	182	1	Intergenic	novelGene_3723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAAAGAAACAGAG	NA	False	NA	NA	False	NA	NA	NA	118331659	118331841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_118331700_118331800
Isoform_50029_9	chr14	+	936	1	NIC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	4	-25164	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGGCATGGGAAGGAAA	NA	False	NA	1	True	NA	NA	NA	118374573	118375509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_118374600_118375500
Isoform_50031_15	chr14	-	3813	1	FSM	ENSMUSG00000061517.9	ENSMUST00000170662.2	3799	1	-14	0	-14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTATTTCTTGTTGAGT	NA	False	NA	NA	False	AATAAA	-25	NA	118474456	118470643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_118470600_118474500
Isoform_50033_15	chr14	-	169	1	Intergenic	novelGene_3724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAGGAACTTTGG	2636	False	NA	NA	False	NA	NA	NA	118691156	118690987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_118691000_118691200
Isoform_50037_3	chr14	+	1157	1	Antisense	novelGene_ENSMUSG00000032849.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGATCTAGCTTGTCC	5344	False	NA	NA	False	AATAAA	-8	NA	118943302	118944459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_118943300_118944500
Isoform_50038_5	chr14	+	1919	1	Antisense	novelGene_ENSMUSG00000032849.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACTTAGCTTTCTTTGG	5366	False	NA	NA	False	NA	NA	NA	118943324	118945243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_118943300_118945200
Isoform_50039_7	chr14	+	677	1	Genic_Genomic	ENSMUSG00000022136.9	novel	NA	NA	NA	NA	-17	-43062	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2312	False	NA	NA	False	NA	NA	NA	119175370	119176047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr14_+_119175400_119176000
Isoform_50041_111	chr14	+	2606	1	FSM	ENSMUSG00000115684.2	ENSMUST00000227446.2	663	1	-119	-1824	-119	1824	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGAATGGCATGGGAGA	2574	False	NA	NA	False	AATAAA	-42	NA	119515716	119518322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_119515700_119518300
Isoform_50044_13	chr14	-	179	1	Intergenic	novelGene_3392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCCTA	NA	False	NA	NA	False	NA	NA	NA	20352392	20352213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_20352200_20352400
Isoform_50045_6	chr14	+	421	1	NIC	ENSMUSG00000022139.18	novel	4552	9	NA	NA	0	-52279	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCG	6867	False	NA	NA	False	AAGAAA	-45	NA	120513118	120513539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_120513100_120513500
Isoform_50046_4	chr14	+	1358	2	NNC	ENSMUSG00000051615.15	novel	4191	2	NA	NA	-68	-27437	at_least_one_novel_splicesite	FALSE	non_canonical	3	46	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	TTTAAA	-26	NA	120715787	120717169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr14_+_120715999_120716022
Isoform_50049_3	chr14	+	173	1	Intergenic	novelGene_3726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTAAGTGAGTGGGATTG	NA	False	NA	NA	False	NA	NA	NA	120747385	120747558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_120747400_120747600
Isoform_50050_6	chr14	-	285	1	Intergenic	novelGene_3727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAAGTAGAGGAAGCT	NA	False	NA	NA	False	NA	NA	NA	121010573	121010288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_121010300_121010600
Isoform_50052_11	chr14	-	176	1	Intergenic	novelGene_3728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	121054751	121054575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_121054600_121054800
Isoform_50053_4	chr14	+	175	1	Intergenic	novelGene_3729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGGGGGA	NA	False	NA	NA	False	NA	NA	NA	121057281	121057456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_121057300_121057500
Isoform_50054_49	chr14	+	177	1	Intergenic	novelGene_3730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121075877	121076054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_121075900_121076100
Isoform_50065_6	chr14	+	180	1	Intergenic	novelGene_3731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAATGAACTGCCTT	NA	False	NA	NA	False	NA	NA	NA	121464144	121464324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_121464100_121464300
Isoform_50073_25	chr14	-	1297	1	FSM	ENSMUSG00000063410.9	ENSMUST00000226158.2	2661	1	-62	1426	-62	-1426	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAACAAAAATC	7374	False	NA	NA	False	NA	NA	NA	121616675	121615378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_121615400_121616700
Isoform_50074_6	chr14	-	169	1	Intergenic	novelGene_3393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAAACAAATGTGTGC	NA	False	NA	NA	False	NA	NA	NA	20399870	20399701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_20399700_20399900
Isoform_50077_5	chr14	-	168	1	Intergenic	novelGene_3732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	121724972	121724804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_121724800_121725000
Isoform_50080_40	chr14	+	308	1	Intergenic	novelGene_3733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCAAAATTT	NA	False	NA	NA	False	NA	NA	NA	121740707	121741015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_121740700_121741000
Isoform_50081_11	chr14	-	187	1	Intergenic	novelGene_3734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTGGTGTGACCCTCA	NA	False	NA	NA	False	NA	NA	NA	121816014	121815827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_121815800_121816000
Isoform_50083_123	chr14	-	184	1	Intergenic	novelGene_3735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121839212	121839028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_121839000_121839200
Isoform_50084_3	chr14	-	171	1	Intergenic	novelGene_3736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAACACATCTCCCCCA	NA	False	NA	NA	False	NA	NA	NA	122110478	122110307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_122110300_122110500
Isoform_50085_3	chr14	-	159	1	Intergenic	novelGene_3737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	122217417	122217258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_122217300_122217400
Isoform_50086_4	chr14	-	176	1	Intergenic	novelGene_3738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	122248993	122248817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_122248800_122249000
Isoform_50090_34	chr14	-	174	1	Intergenic	novelGene_3739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTTAAAAAGG	8734	False	NA	NA	False	NA	NA	NA	122430515	122430341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_122430300_122430500
Isoform_50092_3	chr14	-	168	1	Intergenic	novelGene_3740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGATTCATGTAA	8001	False	NA	NA	False	NA	NA	NA	122453616	122453448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_122453400_122453600
Isoform_50093_9	chr14	-	266	1	Antisense	novelGene_ENSMUSG00000039599.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAAGGGTTTGTCTGGCT	NA	False	NA	NA	False	NA	NA	NA	20421491	20421225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_20421200_20421500
Isoform_50096_209	chr14	+	183	1	Intergenic	novelGene_3741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTACCTAG	NA	False	NA	NA	False	NA	NA	NA	122497600	122497783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_122497600_122497800
Isoform_50098_4	chr14	-	171	1	Intergenic	novelGene_3742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAACCCAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	122511187	122511016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_122511000_122511200
Isoform_50100_3	chr14	-	176	1	Intergenic	novelGene_3743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAACAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	122543527	122543351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_122543400_122543500
Isoform_50103_3	chr14	+	2510	1	Antisense	novelGene_ENSMUSG00000041703.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACAAACCCAAAA	NA	False	NA	NA	False	NA	NA	NA	122702352	122704862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_122702400_122704900
Isoform_50104_5	chr14	-	240	1	Antisense	novelGene_ENSMUSG00000061524.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	122717068	122716828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_122716800_122717100
Isoform_50105_56	chr14	+	176	1	Intergenic	novelGene_3744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	122770465	122770641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_122770500_122770600
Isoform_50107_11	chr5	-	172	1	Intergenic	novelGene_8450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33548034	33547862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_33547900_33548000
Isoform_50110_13	chr14	+	179	1	Intergenic	novelGene_3745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAACTTCAAC	NA	False	NA	NA	False	NA	NA	NA	124620596	124620775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_124620600_124620800
Isoform_50112_5	chr14	+	175	1	Intergenic	novelGene_3746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAACATAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	124826817	124826992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_124826800_124827000
Isoform_50114_3	chr17	-	177	1	Intergenic	novelGene_5204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	86245893	86245716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_86245700_86245900
Isoform_50115_3	chr14	+	178	1	Intergenic	novelGene_3394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACATACAAAT	NA	False	NA	NA	False	NA	NA	NA	20505126	20505304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_20505100_20505300
Isoform_50116_240	chr11	+	179	1	Intergenic	novelGene_2160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATTAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	102647740	102647919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_102647700_102647900
Isoform_50119_7	chr14	+	174	1	Intergenic	novelGene_3395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	20577102	20577276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_20577100_20577300
Isoform_50122_3	chr14	-	157	1	Intergenic	novelGene_3396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAATAAAGTAAAA	7333	False	NA	NA	False	NA	NA	NA	20608184	20608027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_20608000_20608200
Isoform_50125_5	chr14	-	1720	1	FSM	ENSMUSG00000097577.3	ENSMUST00000224976.2	1019	1	8	-709	-8	709	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	20753088	20751368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_-_20751400_20753100
Isoform_50128_3	chr14	-	228	1	Intergenic	novelGene_3397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCGTTTCTTTGCATAT	NA	False	NA	NA	False	NA	NA	NA	20941540	20941312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_20941300_20941500
Isoform_50132_6	chr14	-	155	1	Intergenic	novelGene_3398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	21246502	21246347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_21246300_21246500
Isoform_50133_5	chr14	-	3484	2	Antisense	novelGene_ENSMUSG00000039197.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AAAACA	-9	NA	21355745	21352231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_21354102_21354131
Isoform_50134_4	chr14	-	3083	1	Intergenic	novelGene_3399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGGAAGATTGGGGT	NA	False	NA	NA	False	NA	NA	NA	21366595	21363512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_21363500_21366600
Isoform_50136_52	chr14	-	174	1	Intergenic	novelGene_3400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGGAACAATATAGCTT	NA	False	NA	NA	False	NA	NA	NA	21449463	21449289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_21449300_21449500
Isoform_50140_18	chr14	-	174	1	Intergenic	novelGene_3401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAGAAACAG	NA	False	NA	NA	False	NA	NA	NA	21485746	21485572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_21485600_21485700
Isoform_50142_7	chr14	-	676	1	Intergenic	novelGene_3402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAAGTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	21528363	21527687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_21527700_21528400
Isoform_50145_3	chr14	+	2064	1	NIC	ENSMUSG00000021767.20	novel	606	2	NA	NA	0	-33614	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAAAAAGAATGTTAC	NA	False	NA	NA	False	NA	NA	NA	21531501	21533565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr14_+_21531500_21533600
Isoform_50146_3	chr14	-	1405	1	Intergenic	novelGene_3403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAAAACAAAACCTATT	NA	False	NA	NA	False	AGTAAA	-21	NA	21634109	21632704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_21632700_21634100
Isoform_50153_14	chr14	+	3742	1	ISM	ENSMUSG00000021767.20	ENSMUST00000069648.14	7649	17	168951	1	42984	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGATCTTCATTTTG	NA	False	NA	12	True	AATAAA	-22	NA	21718803	21722545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_21718800_21722500
Isoform_5017_18	chr10	-	1701	2	FSM	ENSMUSG00000040258.7	ENSMUST00000095266.3	1675	2	-22	-4	-22	4	multi-exon	FALSE	canonical	3	10	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGCCTGTGTTAAGACCTT	105	False	NA	NA	False	AATAAA	-14	NA	127370450	127361337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127362833_127370244
Isoform_50175_3	chr14	-	197	1	Intergenic	novelGene_3404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTCCCTGTAAGTCAAT	NA	False	NA	NA	False	AAAACA	-13	NA	21813964	21813767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_21813800_21814000
Isoform_50176_145	chr1	+	177	1	Intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111824484	111824661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_111824500_111824700
Isoform_50179_5	chr14	-	174	1	Intergenic	novelGene_3406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAACAATAA	NA	False	NA	NA	False	NA	NA	NA	21869510	21869336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_21869300_21869500
Isoform_50182_8	chr14	-	181	1	Intergenic	novelGene_3407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGGGGAACCTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	22021651	22021470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_22021500_22021700
Isoform_50184_3	chr14	+	3994	1	Antisense	novelGene_ENSMUSG00000021782.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGTGCTTTGGTGCATGC	NA	False	NA	NA	False	NA	NA	NA	24206897	24210891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_+_24206900_24210900
Isoform_50188_40	chr14	+	178	1	Intergenic	novelGene_3408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAACTGCACA	NA	False	NA	NA	False	NA	NA	NA	24390103	24390281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_24390100_24390300
Isoform_50190_12	chr14	+	176	1	Intergenic	novelGene_3409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	24428854	24429030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_24428900_24429000
Isoform_50202_48	chr14	+	174	1	Intergenic	novelGene_3410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAACGGGGCTTT	29	False	NA	NA	False	NA	NA	NA	25529845	25530019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_25529800_25530000
Isoform_50203_1006	chr1	+	169	1	ISM	ENSMUSG00000026496.12	ENSMUST00000192411.2	553	2	1876	9	1876	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	1006	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	1233	False	NA	NA	False	NA	NA	NA	180420723	180420892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_180420700_180420900
Isoform_50207_19	chr14	+	181	1	Intergenic	novelGene_3412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACCTATGTG	NA	False	NA	NA	False	NA	NA	NA	25704672	25704853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_25704700_25704900
Isoform_50208_4	chr14	+	188	1	Intergenic	novelGene_3371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTGT	NA	False	NA	NA	False	NA	NA	NA	6383753	6383941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_6383800_6383900
Isoform_50212_7	chr10	+	156	1	Intergenic	novelGene_822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATTAATTAATTAA	5313	False	NA	NA	False	NA	NA	NA	41534866	41535022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_41534900_41535000
Isoform_50213_303	chr11	-	176	1	Intergenic	novelGene_1435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32579541	32579365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_32579400_32579500
Isoform_50214_3	chr14	+	217	1	Intergenic	novelGene_3414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAATCCAGGGATGAC	NA	False	NA	NA	False	NA	NA	NA	25899769	25899986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_25899800_25900000
Isoform_50215_7	chr14	+	214	1	Intergenic	novelGene_3415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTGGGCTACCTTGC	NA	False	NA	NA	False	NA	NA	NA	25915183	25915397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_25915200_25915400
Isoform_50217_4	chr14	-	174	1	Intergenic	novelGene_3416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTATTTCT	NA	False	NA	NA	False	NA	NA	NA	25935760	25935586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_25935600_25935800
Isoform_5022_3	chr10	-	4851	30	ISM	ENSMUSG00000040249.16	ENSMUST00000049149.15	14888	89	67680	-1	-3551	1	3prime_fragment	FALSE	canonical	3	26	junction_28	10.903751440746	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCACTGTGTCTGCATG	NA	False	NA	NA	False	AATAAA	-40	NA	127389337	127374028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235
Isoform_50223_5	chr14	-	2910	2	Genic_Genomic	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-2	-72163	multi-exon	TRUE	non_canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	AGTAAA	-6	NA	26256052	26253117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr14_-_26254406_26254430
Isoform_50228_5	chr14	-	3474	1	Antisense	novelGene_ENSMUSG00000040818.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACCCAAAAAACAATGAC	NA	False	NA	NA	False	ACTAAA	-42	NA	26329770	26326296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_26326300_26329800
Isoform_50232_13	chr14	-	172	1	Intergenic	novelGene_3418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATAACCTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	26380391	26380219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_26380200_26380400
Isoform_50233_324	chr14	-	177	1	Intergenic	novelGene_3419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2991	False	NA	NA	False	NA	NA	NA	26439884	26439707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_26439700_26439900
Isoform_50245_33	chr14	+	3603	1	Intergenic	novelGene_3420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAGAAA	1120	False	NA	NA	False	NA	NA	NA	26657613	26661216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_26657600_26661200
Isoform_50247_4	chr14	+	199	1	Intergenic	novelGene_3421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTTAGTACAAATC	NA	False	NA	NA	False	NA	NA	NA	26686428	26686627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_26686400_26686600
Isoform_50253_64	chr14	+	171	1	Intergenic	novelGene_3422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGCCCAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	26735097	26735268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_26735100_26735300
Isoform_50254_19	chr14	-	177	1	Intergenic	novelGene_3423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATATTCCA	NA	False	NA	NA	False	NA	NA	NA	26819452	26819275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_26819300_26819500
Isoform_50256_4	chr14	-	867	1	Intergenic	novelGene_3424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGCCAGCTATTAAGC	NA	False	NA	NA	False	NA	NA	NA	26851106	26850239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_26850200_26851100
Isoform_50259_3	chr14	-	191	1	Intergenic	novelGene_3426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAATAAAGAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	26940619	26940428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_26940400_26940600
Isoform_5026_155	chr10	-	2593	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	-1	True	AATAAA	-21	NA	127502590	127496786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_50260_28	chr14	+	177	1	Intergenic	novelGene_3427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	27013211	27013388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_27013200_27013400
Isoform_50261_5	chr14	-	167	1	Intergenic	novelGene_3428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTTAAAAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	27028619	27028452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_27028500_27028600
Isoform_50262_10	chr3	+	158	1	Intergenic	novelGene_7240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	101472994	101473152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_101473000_101473200
Isoform_50263_12	chr14	+	194	1	Intergenic	novelGene_3430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTACAGTATTTTGCT	9400	False	NA	NA	False	NA	NA	NA	27076794	27076988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_27076800_27077000
Isoform_50266_4	chr14	-	284	1	Intergenic	novelGene_3431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCACTTTCTCAA	NA	False	NA	NA	False	NA	NA	NA	27178326	27178042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_27178000_27178300
Isoform_5027_28	chr10	-	2674	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	-92	0	-92	0	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	-1	True	AATAAA	-21	NA	127502671	127496786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_50275_20	chr16	-	6915	2	Antisense	novelGene_ENSMUSG00000022705.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	43591546	43584569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_43586096_43586157
Isoform_50276_7	chr14	-	177	1	Intergenic	novelGene_3432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAAAATCTGGGCC	NA	False	NA	NA	False	NA	NA	NA	27568741	27568564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_27568600_27568700
Isoform_50277_9	chr14	-	180	1	Intergenic	novelGene_3372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	6301	False	NA	NA	False	NA	NA	NA	7802011	7801831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_7801800_7802000
Isoform_50278_10	chr14	+	180	1	Intergenic	novelGene_3433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTGCACTGTC	NA	False	NA	NA	False	NA	NA	NA	29765207	29765387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_29765200_29765400
Isoform_50281_8	chr14	+	174	1	Intergenic	novelGene_3434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATTCTAGGATAT	NA	False	NA	NA	False	NA	NA	NA	30230469	30230643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_30230500_30230600
Isoform_5029_9	chr10	-	2935	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	-359	6	-359	-5	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGATCCATGGCCCCCTT	NA	False	NA	-7	True	AATAAA	-15	NA	127502938	127496792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_50291_4	chr14	-	2803	1	Intergenic	novelGene_3435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAAAAAG	343	False	NA	NA	False	NA	NA	NA	30277685	30274882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_30274900_30277700
Isoform_50293_6	chr14	-	340	1	Intergenic	novelGene_3437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30285106	30284766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_30284800_30285100
Isoform_50294_9	chr14	-	177	1	Intergenic	novelGene_3436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30284943	30284766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_30284800_30284900
Isoform_50297_15	chr14	-	177	1	Intergenic	novelGene_3438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGAGGTAGTCTT	NA	False	NA	NA	False	NA	NA	NA	30310093	30309916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_30309900_30310100
Isoform_50299_28	chr14	+	186	1	Intergenic	novelGene_3439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTTTTTGTTTTTTT	9748	False	NA	NA	False	NA	NA	NA	30606398	30606584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_30606400_30606600
Isoform_50301_121	chr14	+	176	1	Intergenic	novelGene_3440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	2878	False	NA	NA	False	NA	NA	NA	30719758	30719934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_30719800_30719900
Isoform_50317_3	chr14	+	1016	1	Intergenic	novelGene_3441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	748	False	NA	NA	False	NA	NA	NA	31211501	31212517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_31211500_31212500
Isoform_50327_5	chr14	-	214	1	Intergenic	novelGene_3442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACGAAGTAGCTGAAGTGA	NA	False	NA	NA	False	GATAAA	-10	NA	31358737	31358523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_31358500_31358700
Isoform_50328_16	chr14	+	178	1	Intergenic	novelGene_3443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	31366056	31366234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_31366100_31366200
Isoform_5033_7	chr10	-	2476	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	-165	0	-87	0	multi-exon	FALSE	canonical	3	27	junction_1	16.4851448279959	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGGCCCCCTTCCCCT	NA	False	NA	-2	True	AATAAA	-20	NA	127502666	127496787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_50334_8	chr14	-	174	1	Intergenic	novelGene_3373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAATTCTAT	NA	False	NA	NA	False	NA	NA	NA	8428315	8428141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_8428100_8428300
Isoform_50336_38	chr14	-	164	1	Intergenic	novelGene_3444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATGTGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	31800911	31800747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_31800700_31800900
Isoform_5034_67	chr10	-	2399	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	-89	1	-11	-1	multi-exon	FALSE	canonical	3	27	junction_1	16.4851448279959	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCATGGCCCCCTTCCCC	NA	False	NA	-3	True	AATAAA	-19	NA	127502590	127496788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_50340_11	chr14	+	225	1	Intergenic	novelGene_3445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAACACAGTGAAGTACA	NA	False	NA	NA	False	AAAAAG	-31	NA	31809745	31809970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_31809700_31810000
Isoform_50341_95	chr14	-	179	1	Intergenic	novelGene_3446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGATTCTGG	NA	False	NA	NA	False	NA	NA	NA	31810506	31810327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_31810300_31810500
Isoform_50344_7	chr14	-	1115	1	Genic_Genomic	ENSMUSG00000115760.2	novel	NA	NA	NA	NA	708	499	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	31877320	31876205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr14_-_31876200_31877300
Isoform_50346_7	chr14	-	5994	1	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACCTAACTTCTAAAC	NA	False	NA	NA	False	NA	NA	NA	31900024	31894030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr14_-_31894000_31900000
Isoform_50349_16	chr14	+	178	1	Intergenic	novelGene_3374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	8462649	8462827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_8462600_8462800
Isoform_5035_3	chr10	-	2611	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	-299	-1	-221	0	multi-exon	FALSE	canonical	3	27	junction_1	16.4851448279959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	-1	True	AATAAA	-21	NA	127502800	127496786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_50351_4	chr14	-	2237	1	Genic_Genomic	ENSMUSG00000115691.2	novel	NA	NA	NA	NA	14245	2158	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGAGTCTTATTTCTT	NA	False	NA	-3	True	ATTAAA	-20	NA	32025697	32023460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr14_-_32023500_32025700
Isoform_50354_54	chr14	-	194	1	Intergenic	novelGene_3375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGTAAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	8470499	8470305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_8470300_8470500
Isoform_50356_10	chr14	-	1456	1	Intergenic	novelGene_3447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32052604	32051148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_32051100_32052600
Isoform_50358_4	chr14	-	174	1	Intergenic	novelGene_3376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCCACGCC	NA	False	NA	NA	False	NA	NA	NA	8484324	8484150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_8484200_8484300
Isoform_50359_4	chr14	-	2794	1	Intergenic	novelGene_3448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32950194	32947400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_32947400_32950200
Isoform_50361_5	chr14	+	168	1	Intergenic	novelGene_3449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATTTATTTATTAG	NA	False	NA	NA	False	NA	NA	NA	33786135	33786303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_33786100_33786300
Isoform_50363_18	chr14	+	350	1	FSM	ENSMUSG00000078126.5	ENSMUST00000104925.5	468	1	167	-49	167	49	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2441	False	NA	NA	False	AATATA	-17	NA	33892778	33893128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr14_+_33892800_33893100
Isoform_50366_32	chr14	+	175	1	Intergenic	novelGene_3450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	33977301	33977476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_33977300_33977500
Isoform_50367_14	chr14	+	4810	1	Intergenic	novelGene_3451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34014262	34019072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_34014300_34019100
Isoform_50368_25	chr8	-	177	1	Intergenic	novelGene_11040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTGAACCACAGAA	NA	False	NA	NA	False	NA	NA	NA	124596359	124596182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_124596200_124596400
Isoform_50372_3	chr14	-	200	1	Intergenic	novelGene_3452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGAGAGTGGCAGGCCA	NA	False	NA	NA	False	AATAAA	-5	NA	34053538	34053338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_34053300_34053500
Isoform_50373_11	chr14	-	169	1	Intergenic	novelGene_3453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTTGACTA	NA	False	NA	NA	False	NA	NA	NA	34061239	34061070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_34061100_34061200
Isoform_50384_3	chr14	+	691	1	Intergenic	novelGene_3454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCACTGCTCACTGAC	967	False	NA	NA	False	NA	NA	NA	34086984	34087675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_34087000_34087700
Isoform_50385_134	chr14	-	176	1	Intergenic	novelGene_3455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	34122613	34122437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_34122400_34122600
Isoform_5039_50	chr10	-	5277	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-159	-3637	-159	2088	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128012507	127965338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
Isoform_50390_4	chr14	-	183	1	Intergenic	novelGene_3457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAATTGCTCTCTGGT	NA	False	NA	NA	False	NA	NA	NA	34173215	34173032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_34173000_34173200
Isoform_50393_14	chr14	+	177	1	Intergenic	novelGene_3458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAACATGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	34206364	34206541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_34206400_34206500
Isoform_50395_4	chr14	+	192	1	Intergenic	novelGene_3459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTAAAGAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	34358195	34358387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_34358200_34358400
Isoform_50396_4	chr14	-	181	1	Intergenic	novelGene_3460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAAAAAAAAAGGGAGAG	6170	False	NA	NA	False	NA	NA	NA	34373036	34372855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_34372900_34373000
Isoform_50406_3	chr14	+	1002	1	ISM	ENSMUSG00000097310.3	ENSMUST00000181044.2	3415	3	8923	402	8923	-402	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCACATGTATAAAACGT	NA	False	NA	NA	False	AATAAA	-22	NA	34491106	34492108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr14_+_34491100_34492100
Isoform_50411_3	chr14	+	2245	1	Intergenic	novelGene_3461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36642129	36644374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_36642100_36644400
Isoform_50412_3	chr14	+	168	1	Intergenic	novelGene_3462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	36670854	36671022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_36670900_36671000
Isoform_50421_3	chr14	+	176	1	Intergenic	novelGene_3463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGTGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	36865162	36865338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_36865200_36865300
Isoform_50423_3	chr14	+	211	1	Intergenic	novelGene_3464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGCTGTGGTACCAGTCT	NA	False	NA	NA	False	NA	NA	NA	37177557	37177768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_37177600_37177800
Isoform_50424_76	chr5	-	177	1	Intergenic	novelGene_8332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGAGATTTAGG	NA	False	NA	NA	False	NA	NA	NA	5752743	5752566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_5752600_5752700
Isoform_50425_7	chr14	-	179	1	Intergenic	novelGene_3466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTAGTAATTATAT	NA	False	NA	NA	False	NA	NA	NA	38384836	38384657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_-_38384700_38384800
Isoform_50426_10	chr14	+	178	1	Intergenic	novelGene_3467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCACTATTTCG	2235	False	NA	NA	False	NA	NA	NA	39222375	39222553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_39222400_39222600
Isoform_50427_5	chr15	-	954	9	FSM	ENSMUSG00000091119.3	ENSMUST00000165386.2	798	9	-30	-126	-30	126	multi-exon	FALSE	canonical	2	12	junction_4	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTGCATTTATTTTG	8066	False	NA	NA	False	AATAAA	-20	NA	3333038	3309982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_3310232_3310504_3310589_3312299_3312428_3319606_3319710_3321861_3321927_3323334_3323404_3327582_3327689_3330586_3330676_3332977
Isoform_50428_3	chr15	-	1366	9	NNC	ENSMUSG00000091119.3	novel	798	9	NA	NA	-16	127	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	9.84171605971235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGCATTTATTTTGA	8080	False	NA	NA	False	AATAAA	-21	NA	3333024	3309981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_3310232_3310504_3310589_3312299_3312428_3319606_3319710_3321861_3321927_3323334_3323404_3327582_3327689_3330586_3330676_3332552
Isoform_5043_191	chr10	-	1516	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-159	124	-159	93	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTTTCTTGCTTTGT	NA	False	NA	-4	True	AAAAAG	-19	NA	128012507	127969099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
Isoform_50430_4	chr15	-	4179	11	FSM	ENSMUSG00000055737.13	ENSMUST00000069451.11	4175	11	-6	2	-6	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.02469507659596	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTGATCTTATGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	3612718	3347243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_3350205_3350470_3350541_3355379_3355471_3357455_3357625_3362828_3363008_3370400_3370574_3375990_3376015_3376953_3377084_3418129_3418196_3487411_3487491_3612481
Isoform_50431_7	chr15	-	1458	7	FSM	ENSMUSG00000022184.9	ENSMUST00000022791.9	1565	7	83	24	83	-24	multi-exon	FALSE	canonical	3	8	junction_6	2.40947204913349	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAAATTTTGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	4008972	3994950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007243_4007480_4008723
Isoform_50432_245	chr15	-	5070	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	3	3	3	-3	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2183	False	NA	-13	True	AATAAA	-17	NA	4025223	4011519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
Isoform_50439_5	chr15	-	5165	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	110.859896566191	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2181	False	NA	-13	True	AATAAA	-17	NA	4025225	4011519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4024776_4024870_4025096
Isoform_50440_23	chr15	-	5559	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	7	-3	intron_retention	FALSE	canonical	3	219	junction_2	23.7907545067406	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2187	False	NA	-13	True	AATAAA	-17	NA	4025219	4011519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021947_4025096
Isoform_50448_217	chr15	-	2122	18	FSM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	5	-1	5	1	multi-exon	TRUE	canonical	3	158	junction_1	88.3053055575902	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATTTTGTCCTTTCTG	NA	False	NA	-5	True	AATAAA	-15	NA	8128670	7902541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
Isoform_50455_89	chr15	-	1673	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	23	-566	5	566	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAGCTTGGCTATGTTG	NA	False	NA	-3	True	NA	NA	NA	8128670	8121144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
Isoform_50456_96	chr15	-	1106	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	21	3	3	-3	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTGCATTATTCAGCA	NA	False	NA	NA	False	NA	NA	NA	8128672	8121713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
Isoform_50458_9	chr15	-	3968	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	20	-2858	2	2858	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGTAAGATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	8128673	8118852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
Isoform_50460_3	chr15	-	9179	47	FSM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	-30	274	-30	-274	multi-exon	TRUE	canonical	2	7	junction_43	23.7522658356028	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTAGCAGCGGATGGC	NA	False	NA	-7	True	AATAAA	-14	NA	8473977	8320374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
Isoform_50467_9	chr15	-	3982	11	NIC	ENSMUSG00000005360.15	novel	4163	10	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	19.3225257148231	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTGTATGTTATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	8739966	8663608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717194_8717297_8717771_8717910_8738045_8738324_8739822
Isoform_50469_138	chr15	-	3882	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	280	1	-3	-1	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTGTATGTTATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	8739968	8663608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
Isoform_50473_6	chr15	-	4192	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	-31	2	-31	-2	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTTGTATGTTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	8740279	8663609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
Isoform_50474_8	chr15	-	2229	5	FSM	ENSMUSG00000005360.15	ENSMUST00000153455.8	1252	5	-68	-909	-3	909	multi-exon	FALSE	canonical	3	13	junction_1	23.8156986040721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTTGCACATATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	8739968	8709095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_8710661_8717194_8717297_8717771_8717910_8738045_8738324_8739822
Isoform_50477_3	chr15	-	3839	3	FSM	ENSMUSG00000005360.15	ENSMUST00000129325.2	964	3	32	-2907	17	1025	multi-exon	FALSE	canonical	3	60	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8739948	8714474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_8717910_8738045_8738324_8739822
Isoform_50479_217	chr15	-	3130	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	-13	1	-13	-1	multi-exon	FALSE	canonical	3	163	junction_7	20.0690167197789	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGAGCTGCTTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	9140465	9112073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
Isoform_5048_11	chr10	-	1700	15	NNC	ENSMUSG00000040043.18	novel	3380	15	NA	NA	16	93	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	102.033507901541	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTTTCTTGCTTTGT	NA	False	NA	-4	True	AAAAAG	-19	NA	128016150	127969099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128015661_128015715_128015817
Isoform_50480_281	chr15	-	3102	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	15	1	2	-1	multi-exon	TRUE	canonical	3	163	junction_7	20.0690167197789	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGAGCTGCTTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	9140437	9112073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
Isoform_50484_25	chr15	-	3213	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	-96	1	-22	-1	multi-exon	FALSE	canonical	3	163	junction_7	20.0690167197789	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGAGCTGCTTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	9140548	9112073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
Isoform_50488_8	chr15	-	1372	3	FSM	ENSMUSG00000054115.13	ENSMUST00000191316.2	1391	3	-2	21	-2	-21	multi-exon	FALSE	canonical	3	181	junction_1	23	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9140441	9127155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_9128085_9139518_9139791_9140270
Isoform_5049_18	chr10	-	1334	14	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-191	92	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_13	80.9962377678394	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTCTTGCTTTG	NA	False	NA	-5	True	AAAAAG	-18	NA	128012539	127969100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128012518
Isoform_50499_823	chr15	-	2096	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-44	8	-44	1	multi-exon	FALSE	canonical	3	660	junction_1	60.8163473021321	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCTTTCTGCTTCA	NA	False	NA	-23	True	ATTAAA	-15	NA	10470646	10446849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
Isoform_5050_5	chr10	-	5101	14	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-196	2088	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_13	80.9962377678394	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128012544	127965338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128012518
Isoform_50502_212	chr15	-	2134	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-81	7	-81	2	multi-exon	TRUE	canonical	3	660	junction_1	60.8163473021321	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCTTTCTGCTTCAG	NA	False	NA	-22	True	ATTAAA	-16	NA	10470683	10446848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
Isoform_5051_6	chr10	-	1570	14	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-129	92	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	111.161325274065	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTCTTGCTTTG	NA	False	NA	-5	True	AAAAAG	-18	NA	128012477	127969100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970629_127970715_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
Isoform_50513_271	chr15	-	2593	11	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	9	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	734.144427207617	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGCTTTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	10485986	10474862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_10475140_10475165_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
Isoform_50514_1751	chr15	-	1216	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	47	1401	9	-1401	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACTTTATTCTTTTCA	NA	False	NA	-10	True	AATAAA	-15	NA	10485986	10476265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
Isoform_50515_47	chr15	-	2625	11	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	734.144427207617	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGCTTTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	10486018	10474862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_10475140_10475165_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
Isoform_50516_395	chr15	-	1249	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	15	1400	15	-1400	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTATTCTTTTCAG	NA	False	NA	-9	True	AATAAA	-16	NA	10486018	10476264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
Isoform_5052_243	chr10	-	1575	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	5	3	5	-3	multi-exon	FALSE	canonical	3	299	junction_1	0	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTCTGTCTATAAAAT	NA	False	NA	-3	True	AATAAA	-38	NA	128047671	128045779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128047261_128047577
Isoform_50532_139	chr15	-	4850	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-100	9	-43	-9	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	-11	True	NA	-12	True	AATAAA	-17	NA	10714753	10569063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
Isoform_50535_17	chr15	-	4996	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-246	9	-189	-9	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	8651	False	NA	-12	True	AATAAA	-17	NA	10714899	10569063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
Isoform_50538_6	chr15	-	4957	18	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	22465	-10	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_17	44.1362313798451	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	NA	False	NA	-13	True	AATAAA	-16	NA	10691161	10569064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10690908
Isoform_50539_10	chr15	-	4845	18	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	22499	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_17	45.3846307232124	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	NA	False	NA	-9	True	AATAAA	-20	NA	10691127	10569060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10690990
Isoform_5054_18	chr10	-	1371	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	-12	1	-12	-1	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGGTCTAAATTTCTA	NA	False	NA	NA	False	NA	NA	NA	128133965	128132008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
Isoform_50540_4	chr15	-	4802	18	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	-678	-9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	45.9273534977573	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	8162	False	NA	-12	True	AATAAA	-17	NA	10715388	10569063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10715291
Isoform_50544_13	chr15	-	4763	17	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-43	-9	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	36.5957114119947	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	-11	True	NA	-12	True	AATAAA	-17	NA	10714753	10569063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
Isoform_50546_27	chr15	-	4721	17	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	36.5957114119947	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	34	True	NA	-9	True	AATAAA	-20	NA	10714708	10569060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
Isoform_50547_4	chr15	-	4837	17	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	22502	-6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	49.8494216992534	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	NA	False	NA	-9	True	AATAAA	-20	NA	10691124	10569060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10690908
Isoform_50548_12	chr15	-	4819	16	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-179	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	41.6628798279182	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATTTGTGGTGTTTGT	8661	False	NA	-5	True	AATAAA	-24	NA	10714889	10569056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
Isoform_50549_12	chr15	-	4764	16	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-127	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	41.6628798279182	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGATTTGTGGTGTT	8713	False	NA	-8	True	AATAAA	-21	NA	10714837	10569059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
Isoform_50552_4	chr15	-	4734	16	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	22522	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_15	53.8056585210969	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATTTGTGGTGTTTGT	NA	False	NA	-5	True	AATAAA	-24	NA	10691104	10569056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10690908
Isoform_5056_10	chr10	-	1430	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	-71	1	-71	-1	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGGTCTAAATTTCTA	NA	False	NA	NA	False	NA	NA	NA	128134024	128132008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
Isoform_5057_20	chr10	-	1300	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	10	-3	10	3	multi-exon	FALSE	canonical	3	22	junction_4	35.9400542570542	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCATTTTTTGAGGGG	7255	False	NA	0	True	AATAAA	-15	NA	128204550	128198965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204387
Isoform_50583_6464	chr15	-	2618	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	22	1365	22	339	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	6464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATATCAAGACCTCTGTC	NA	False	NA	-11	True	AATAAA	-12	NA	11399729	11383751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
Isoform_50584_277	chr15	-	2645	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	-5	1365	-5	339	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATATCAAGACCTCTGTC	NA	False	NA	-11	True	AATAAA	-12	NA	11399756	11383751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
Isoform_5059_131	chr10	-	1424	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	13	-3	-3	3	multi-exon	FALSE	canonical	3	69	junction_4	16.3248277173145	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCATTTTTTGAGGGG	6952	False	NA	0	True	AATAAA	-15	NA	128204853	128198965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
Isoform_50596_18	chr15	-	2434	8	FSM	ENSMUSG00000022206.8	ENSMUST00000228603.2	2437	8	4	-1	4	1	multi-exon	FALSE	canonical	3	16	junction_2	6.17433793856409	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGGAGGTGTGTGACAAA	1449	False	NA	NA	False	ATTAAA	-23	NA	11905756	11844467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
Isoform_50599_3	chr15	-	6864	8	FSM	ENSMUSG00000022206.8	ENSMUST00000228603.2	2437	8	56	-4483	21	-4	multi-exon	FALSE	canonical	3	16	junction_2	6.17433793856409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGTTTCCTGTCTATA	1501	False	NA	-5	True	ATTAAA	-14	NA	11905704	11839985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
Isoform_5060_20	chr10	-	1615	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	-178	-3	-178	3	multi-exon	FALSE	canonical	3	69	junction_4	16.3248277173145	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCATTTTTTGAGGGG	6761	False	NA	0	True	AATAAA	-15	NA	128205044	128198965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
Isoform_50600_16	chr15	-	2455	8	FSM	ENSMUSG00000022206.8	ENSMUST00000066529.5	6892	8	-50	4487	-15	0	multi-exon	FALSE	canonical	3	12	junction_2	7.24498419034627	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAGGAGGTGTGTGACAA	1430	False	NA	NA	False	ATTAAA	-22	NA	11905775	11844468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_11845375_11846383_11846472_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
Isoform_50608_205	chr15	-	3320	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	55	-3	9	3	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGTTATCCCATGT	864	False	NA	NA	False	AATAAA	-14	NA	11996089	11981421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
Isoform_50610_2760	chr15	-	682	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	53	2637	7	65	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	2760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTACCCTTTTTTGA	862	False	NA	78	True	AATAAA	-21	NA	11996091	11984061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
Isoform_50620_8	chr15	-	3433	8	FSM	ENSMUSG00000022195.8	ENSMUST00000228177.2	3156	8	-47	-230	-9	230	multi-exon	FALSE	canonical	3	21	junction_6	133.553321920192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTTAATTTTTTAT	NA	False	NA	-10	True	AATAAA	-13	NA	12824744	12808501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818214_12821489_12821640_12824552
Isoform_50625_384	chr15	-	3702	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	30	234	-8	-234	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824705	12808496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
Isoform_50626_45	chr15	-	3367	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	7	592	-1	3	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATCAAAAGATTTGT	NA	False	NA	-9	True	AATAAA	-22	NA	12824728	12808854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
Isoform_5063_9	chr10	-	1476	5	FSM	ENSMUSG00000039914.7	ENSMUST00000043211.7	1421	5	-52	-3	-9	3	multi-exon	FALSE	canonical	3	7	junction_3	37.9629753839185	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCATTTTTTGAGGGG	6930	False	NA	0	True	AATAAA	-15	NA	128204875	128198965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128199661_128200273_128200376_128200891_128201115_128203875_128204023_128204566
Isoform_50631_39	chr15	-	3551	8	FSM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	12	-357	-7	231	multi-exon	FALSE	canonical	3	60	junction_7	97.0238767163074	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	NA	False	NA	-9	True	AATAAA	-14	NA	12824704	12808500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
Isoform_50637_12	chr15	-	3632	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-7	233	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	109.959547292704	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTAATTTTTTATTAT	NA	False	NA	-7	True	AATAAA	-16	NA	12824704	12808498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
Isoform_50638_11	chr15	-	3502	7	NIC	ENSMUSG00000022195.8	novel	3206	8	NA	NA	-5	232	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	140.23512002665	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTAATTTTTTATTA	NA	False	NA	-8	True	AATAAA	-15	NA	12824721	12808499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
Isoform_5064_3	chr10	-	4212	4	NIC	ENSMUSG00000039914.7	novel	1421	5	NA	NA	-1	2	intron_retention	FALSE	canonical	3	69	junction_3	15.06283137026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCATTTTTTGAGGG	6954	False	NA	-1	True	AATAAA	-14	NA	128204851	128198966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_128199661_128200273_128200376_128200891_128204023_128204566
Isoform_50640_12	chr15	-	850	3	FSM	ENSMUSG00000022195.8	ENSMUST00000228888.2	1971	3	0	1121	0	-1121	multi-exon	FALSE	canonical	3	264	junction_2	25	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	12824727	12821110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_12821640_12823646_12823793_12824552
Isoform_50644_38	chr15	-	1842	2	FSM	ENSMUSG00000045763.9	ENSMUST00000058845.9	1855	2	5	8	5	-8	multi-exon	FALSE	canonical	3	95	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAGTAACTGGCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	25413845	25363370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_25365005_25413637
Isoform_50646_3	chr15	-	4616	5	NNC	ENSMUSG00000043556.11	novel	4632	4	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.73205080756888	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCAGTTCCATTTTTTA	287	False	NA	NA	False	AATAAA	-18	NA	26895671	26540542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_26542194_26542216_26543907_26552526_26553139_26789598_26789689_26895098
Isoform_50649_288	chr15	-	1496	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	-8	3	-8	-3	multi-exon	FALSE	canonical	3	220	junction_2	23.0771652408946	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTAGTTTTGTATTTG	NA	False	NA	-8	True	AATGAA	-37	NA	27630787	27606007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
Isoform_50652_8	chr15	-	2346	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	-8	-847	-8	847	multi-exon	FALSE	canonical	3	220	junction_2	23.0771652408946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAATCAGGCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	27630787	27605157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
Isoform_50653_9	chr15	-	1401	6	NIC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	98.7825895590918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTAGTTTTGTATTT	NA	False	NA	-9	True	AATGAA	-36	NA	27630770	27606008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630543
Isoform_50654_16	chr15	-	2884	6	ISM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	11	726	-4	-726	5prime_fragment	FALSE	canonical	3	220	junction_1	25.2713276263832	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTCCCTTTTGGATAT	NA	False	NA	NA	False	NA	NA	NA	27630768	27606730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
Isoform_50657_3	chr15	-	2686	3	ISM	ENSMUSG00000022263.11	ENSMUST00000227999.2	3132	8	6777	1	976	-1	3prime_fragment	FALSE	canonical	3	13	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTTAGGCTTTTT	NA	False	NA	-1	True	ATTAAA	-13	NA	27735632	27730737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_27733117_27733591_27733731_27735464
Isoform_50659_5	chr15	-	4272	3	ISM	ENSMUSG00000022237.18	ENSMUST00000110410.10	2070	4	42220	-2572	-74	3	3prime_fragment	FALSE	canonical	2	3	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTCTTCTGTTTGTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	31325469	31294237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_31298131_31305137_31305279_31325231
Isoform_5066_12	chr10	-	1428	6	FSM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	-58	1	-50	-1	multi-exon	FALSE	canonical	3	274	junction_1	33.0732520324204	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGAGTCTGTGTTTCT	NA	False	NA	-8	True	AATAAA	-12	NA	128245655	128237264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115
Isoform_50660_12	chr15	-	2120	4	FSM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	153	5193	-5	-7	multi-exon	FALSE	canonical	2	3	junction_2	1.88561808316413	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTACACAGAAGGGAT	42	False	NA	NA	False	AATAAA	-17	NA	31367719	31296816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_31298131_31305137_31305279_31325231_31325362_31367184
Isoform_50676_86	chr15	-	6224	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	28	8	28	-8	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTCTTTTTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	31531171	31456044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
Isoform_5068_149	chr10	-	1106	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	24	0	24	0	multi-exon	FALSE	canonical	3	274	junction_1	32.5444140965679	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	128245719	128237263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
Isoform_5070_33	chr10	-	687	7	FSM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	4	0	1	0	multi-exon	FALSE	canonical	3	38	junction_2	1160.32375750142	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8246	False	NA	-5	True	AATAAA	-20	NA	128329722	128326729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
Isoform_50709_5634	chr15	-	1726	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	43	84	-21	-84	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	5634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTCTGCAGTTACT	NA	False	NA	-31	True	AATAAA	-44	NA	31601907	31591029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
Isoform_50710_1338	chr15	-	1800	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	39	14	-25	-14	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTTCCACTTATTCAGA	NA	False	NA	-17	True	AATAAA	-16	NA	31601911	31590959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
Isoform_50731_303	chr15	-	539	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	32	-1	-30	1	multi-exon	FALSE	canonical	3	4307	junction_1	558.07426825548	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGGTGTCTGTTTGC	393	False	NA	-24	True	AATAAA	-23	NA	34443336	34440654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
Isoform_50734_592	chr15	-	501	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	381	4	0	1	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGGTGTCTGTTTGC	324	False	NA	-24	True	AATAAA	-23	NA	34443405	34440654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
Isoform_50735_99	chr15	-	782	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	100	4	100	1	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGGTGTCTGTTTGC	43	False	NA	-24	True	AATAAA	-23	NA	34443686	34440654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
Isoform_50739_158	chr15	-	450	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	3	777	junction_4	1906.75842400132	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGGTGTCTGTTTGC	393	False	NA	-24	True	AATAAA	-23	NA	34443336	34440654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443312
Isoform_50741_115	chr15	-	993	6	FSM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	10	1	10	-1	multi-exon	FALSE	canonical	3	250	junction_4	17.7245592328836	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTTTTTAATTTTGTT	NA	False	NA	-11	True	AATAAA	-20	NA	34495391	34484167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
Isoform_50744_3	chr15	-	1142	8	ISM	ENSMUSG00000038879.9	ENSMUST00000040791.9	4331	11	473	9706	4	-6999	5prime_fragment	FALSE	canonical	2	6	junction_2	2.31234486517695	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTGGCGTTCAAATGA	-1	True	NA	NA	False	NA	NA	NA	34678885	34582650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_34582956_34584775_34584912_34600160_34600258_34609318_34609441_34625117_34625178_34648811_34648984_34650527_34650597_34678704
Isoform_50748_20	chr15	-	2911	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	1	2	1	-2	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCGTTGTTGTTATT	NA	False	NA	0	True	AATAAA	-19	NA	35155951	34875643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
Isoform_50749_319	chr15	-	2829	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	84	1	28	-1	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCGTTGTTGTTATTG	NA	False	NA	1	True	AATAAA	-20	NA	35155868	34875642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
Isoform_5076_1304	chr10	-	643	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	21	1	0	0	multi-exon	FALSE	canonical	3	2189	junction_3	223.361948415571	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8245	False	NA	-5	True	AATAAA	-20	NA	128329723	128326729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
Isoform_50761_46	chr15	-	1223	3	FSM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	-485	0	77	0	multi-exon	FALSE	canonical	3	8821	junction_1	415.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	NA	False	NA	-5	True	AATAAA	-18	NA	35938276	35932125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_35932244_35935430_35935560_35937300
Isoform_50766_2752	chr15	-	420	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	79	4	40	0	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	2752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	NA	False	NA	-5	True	AATAAA	-18	NA	35938313	35932125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
Isoform_50767_699	chr15	-	447	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	52	4	13	0	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	NA	False	NA	-5	True	AATAAA	-18	NA	35938340	35932125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
Isoform_50771_286	chr15	-	4283	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-6	0	-6	0	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGTGCCCAGGAAT	NA	False	NA	1	True	AATAAA	-17	NA	36283299	36240078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
Isoform_50780_926	chr15	-	2465	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	44	0	13	0	multi-exon	FALSE	canonical	3	250	junction_4	35.6195171219375	926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	36496922	36477813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
Isoform_50782_11	chr15	-	2128	14	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4586	-241	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	6.43492688565058	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTCGCCAATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	36560304	36504798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_36505617_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36560155
Isoform_50783_6	chr15	-	2240	15	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4601	-241	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	7.66418918858136	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTCGCCAATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	36560319	36504798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_36505617_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36556627_36556725_36560155
Isoform_50785_6	chr15	-	2212	15	NNC	ENSMUSG00000013611.15	novel	2344	14	NA	NA	-4570	-241	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	8.53444401785363	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTCGCCAATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	36560288	36504798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_36505620_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36556627_36556725_36560155
Isoform_5079_6	chr10	-	970	6	ISM	ENSMUSG00000039824.5	ENSMUST00000026428.4	1026	7	1266	0	1266	0	3prime_fragment	FALSE	canonical	0	0	junction_1	1.72046505340853	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGTTTCCGACAGTTTT	4680	False	NA	-10	True	AATAAA	-14	NA	128333288	128330025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_128330353_128330458_128330537_128330922_128331097_128332121_128332266_128332482_128332511_128333069
Isoform_508_895	SIRV1	-	1560	6	FSM	SIRV1A	SIRV101	1561	6	1	0	1	0	multi-exon	FALSE	canonical	3	1499	junction_5	1975.53128044078	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10785	1000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
Isoform_50836_8788	chr15	-	2816	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	1	0	1	0	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	8788	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
Isoform_5088_306	chr10	-	3806	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-111	286	-110	5	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTGCTTCATGAACTT	8208	False	NA	-8	True	AATAAA	-12	NA	128361850	128346119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
Isoform_5089_316	chr10	-	3696	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-1	286	0	5	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTGCTTCATGAACTT	8318	False	NA	-8	True	AATAAA	-12	NA	128361740	128346119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
Isoform_5090_28	chr10	-	3878	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-183	286	-182	5	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTGCTTCATGAACTT	8136	False	NA	-8	True	AATAAA	-12	NA	128361922	128346119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
Isoform_50906_610	chr15	-	3337	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	225	-1440	-93	506	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAAGGCTTCACGTCTG	665	False	NA	-3	True	AATAAA	-32	NA	36793856	36770507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
Isoform_50907_4824	chr15	-	2811	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	242	-931	-76	-3	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	4824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCATGAGTCTCAGTGG	682	False	NA	-42	True	NA	NA	NA	36793839	36771016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
Isoform_50928_108	chr15	-	3014	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	274	0	267	0	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	13	True	NA	-39	True	NA	NA	NA	36794508	36771013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
Isoform_5093_8	chr10	-	3959	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-97	119	-96	-119	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGTCTCTCCGACTGC	8222	False	NA	NA	False	AATAAA	-20	NA	128361836	128345952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
Isoform_50963_8978	chr15	-	2351	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	84	1982	84	1619	multi-exon	TRUE	canonical	3	6501	junction_2	212.49836600679	8978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGAAACTAGTCTAATTT	239	False	NA	-14	True	ATTAAA	-11	NA	37007562	36999252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
Isoform_50964_142	chr15	-	2505	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	-70	1982	-70	1619	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGAAACTAGTCTAATTT	85	False	NA	-14	True	ATTAAA	-11	NA	37007716	36999252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
Isoform_50967_2108	chr15	-	811	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	15	3591	15	10	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAAATGGTTCTAGAAAT	170	False	NA	-16	True	AATAAA	-28	NA	37007631	37000861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
Isoform_50994_15	chr15	-	4326	9	FSM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	233	2	-21	-2	multi-exon	FALSE	canonical	3	32	junction_4	8.71779788708135	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTTATATCATT	7341	False	NA	NA	False	AATAAA	-14	NA	37961114	37924197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_37927642_37929281_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
Isoform_50995_10	chr15	-	4534	9	FSM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	20	7	20	-7	multi-exon	FALSE	canonical	3	32	junction_4	8.71779788708135	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATTGTGTAGTTATA	7128	False	NA	NA	False	AATAAA	-9	NA	37961327	37924202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_37927642_37929281_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
Isoform_51_14	ERCC-00034	+	1001	1	FSM	ERCC-00034A	DQ855001	1003	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00034_+_0_1000
Isoform_5102_32	chr10	-	2306	3	FSM	ENSMUSG00000039810.12	ENSMUST00000152539.8	992	3	197	-1511	197	1229	multi-exon	FALSE	canonical	3	17	junction_2	46	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGTGAAAATTTCTTT	NA	False	NA	-14	True	AATAAA	-17	NA	128383311	128379437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128381408_128382696_128382761_128383039
Isoform_5105_6	chr10	-	2177	4	NIC	ENSMUSG00000039810.12	novel	565	5	NA	NA	12	1229	intron_retention	FALSE	canonical	1	1	junction_3	47.5908487935327	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGTGAAAATTTCTTT	NA	False	NA	-14	True	AATAAA	-17	NA	128383631	128379437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_128381408_128382696_128382761_128383039_128383114_128383562
Isoform_5106_210	chr10	-	2085	3	FSM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	28	1608	-3	1227	multi-exon	FALSE	canonical	3	75	junction_2	17	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAAAGTGAAAATTTCT	NA	False	NA	-16	True	AATAAA	-15	NA	128383615	128379439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128381408_128382696_128382761_128383562
Isoform_51076_191	chr15	-	9210	59	FSM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	27	5	27	-5	multi-exon	FALSE	canonical	0	0	junction_21	176.45579964147	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	-10	True	AATAAA	-26	NA	38079071	37968107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
Isoform_51077_10	chr15	-	9742	59	FSM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	27	-527	27	-4	multi-exon	TRUE	canonical	0	0	junction_21	176.45579964147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTAACATTGAAGAAACAG	NA	False	NA	NA	False	AATAAA	-17	NA	38079071	37967575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
Isoform_51078_81	chr15	-	9248	59	FSM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	-422	-429	7	-5	multi-exon	FALSE	canonical	0	0	junction_21	178.88035064093	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	-10	True	AATAAA	-26	NA	38079091	37968107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
Isoform_51095_7561	chr15	-	3042	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	2	0	2	0	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	7561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	-7	True	AATAAA	-18	NA	38300948	38294656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
Isoform_51097_175	chr15	-	3075	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	-31	0	-31	0	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	-7	True	AATAAA	-18	NA	38300981	38294656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
Isoform_5110_898	chr10	-	469	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177163.8	544	3	70	5	19	1	multi-exon	FALSE	canonical	3	15318	junction_2	3514.5	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGCTGTTACGTGTT	NA	False	NA	-23	True	AATAAA	-24	NA	128384952	128383987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128384299_128384526_128384550_128384817
Isoform_51106_16	chr15	-	4272	13	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	55	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	196.59151106348	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
Isoform_51108_93	chr15	-	4109	12	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	55	combination_of_known_junctions	FALSE	canonical	2	62	junction_3	129.988874285519	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519507	38488426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
Isoform_51110_9	chr15	-	4180	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	123	combination_of_known_junctions	FALSE	canonical	2	62	junction_3	129.988874285519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGAAGCTTTTAATGAAT	NA	False	NA	67	True	AGTAAA	-23	NA	38519510	38488358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
Isoform_51117_60	chr15	-	4274	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	-3	-54	0	54	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTATATTGCCCAC	NA	False	NA	-2	True	AATAGA	-20	NA	38519510	38488427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
Isoform_5112_334	chr10	-	387	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176683.8	437	4	48	2	-2	1	multi-exon	FALSE	canonical	3	590	junction_3	9065.73447413697	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTGTTACGTGTTTTT	NA	False	NA	-20	True	AATAAA	-27	NA	128384983	128383984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128384299_128384526_128384550_128384817_128384841_128384956
Isoform_51121_390	chr15	-	4115	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	756	0	55	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
Isoform_51128_19	chr15	-	4350	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	521	0	290	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAACTCCATCCTCAGT	NA	False	NA	47	True	ACTAAA	-17	NA	38519510	38488191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
Isoform_51131_24	chr15	-	4267	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	55	combination_of_known_junctions	FALSE	canonical	2	46	junction_7	133.945283018758	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
Isoform_51135_6	chr15	-	2269	7	FSM	ENSMUSG00000022299.10	ENSMUST00000227323.2	979	7	-8	-1282	-8	181	multi-exon	FALSE	canonical	2	3	junction_3	37.5307281511504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGTGTTTGCTATAA	NA	False	NA	NA	False	AATAAA	-26	NA	38976076	38958181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38959504_38960914_38961061_38961523_38961593_38963267_38963429_38965377_38965464_38969226_38969378_38975742
Isoform_51136_93	chr15	-	2306	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	42	3557	-1	180	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAATGGTGTTTGCTATA	NA	False	NA	NA	False	AATAAA	-25	NA	38976069	38958182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
Isoform_51137_32	chr15	-	2371	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	-22	3556	-22	181	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGTGTTTGCTATAA	NA	False	NA	NA	False	AATAAA	-26	NA	38976133	38958181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
Isoform_51138_18	chr15	-	2817	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	42	3046	-1	691	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGAGTTCTATCTGCC	NA	False	NA	-2	True	ATTAAA	-19	NA	38976069	38957671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
Isoform_5114_15354	chr10	-	389	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	191	2	-2	1	multi-exon	FALSE	canonical	3	7075	junction_3	6241.33064516071	15354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTGTTACGTGTTTTT	NA	False	NA	-20	True	AATAAA	-27	NA	128384983	128383984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128384299_128384526_128384550_128384817_128384843_128384956
Isoform_51141_9	chr15	-	5908	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	-10	7	-10	-7	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGTCTCAATTTGG	NA	False	NA	NA	False	AATAAA	-9	NA	38976121	38954632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
Isoform_51143_73	chr15	-	710	2	ISM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	72605	0	8386	0	3prime_fragment	FALSE	canonical	3	216	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	39648261	39646092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_39646506_39647964
Isoform_51144_17	chr15	-	2089	10	FSM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	21	0	18	0	multi-exon	FALSE	canonical	0	0	junction_5	67.0043300609265	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	39720845	39646092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_39646506_39647964_39648111_39656622_39656831_39687561_39687705_39690259_39690402_39691370_39691528_39705318_39705509_39707253_39707434_39710004_39710164_39720494
Isoform_51147_29	chr15	-	4317	7	FSM	ENSMUSG00000022305.14	ENSMUST00000022916.13	4109	7	-211	3	-5	-3	multi-exon	FALSE	canonical	3	34	junction_6	6.95221787153807	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAAGTTGTTCTTTAT	NA	False	NA	-5	True	ATTAAA	-33	NA	39807395	39733987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39767934_39767992_39806999
Isoform_51149_11	chr15	-	4276	6	FSM	ENSMUSG00000022305.14	ENSMUST00000110305.3	4244	6	-31	-1	-31	1	multi-exon	FALSE	canonical	3	14	junction_5	13.6733317081098	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACTTTTTAAATCAAAGT	NA	False	NA	-15	True	ATTAAA	-23	NA	39807421	39733997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39806999
Isoform_51163_34	chr15	-	1711	14	NIC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	11	6	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	986.125998646776	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGAATTTCCTTT	2674	False	NA	-16	True	AATAAA	-22	NA	43146104	43113447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43144414_43144625_43145998
Isoform_51164_87	chr15	-	1555	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	-44	-5	-44	5	multi-exon	FALSE	canonical	3	2495	junction_1	136.260065887095	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2619	False	NA	-17	True	AATAAA	-21	NA	43146159	43113448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
Isoform_51165_2251	chr15	-	1500	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	11	-5	11	5	multi-exon	FALSE	canonical	3	2495	junction_1	136.260065887095	2251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2674	False	NA	-17	True	AATAAA	-21	NA	43146104	43113448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
Isoform_51176_75	chr15	-	3029	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	412	-841	-7	841	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTGTAGTGATGTTTGT	NA	False	NA	-8	True	AATAAA	-17	NA	44291291	44238625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
Isoform_51177_354	chr15	-	2979	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	465	-844	12	844	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTGATGTTTGTTTT	NA	False	NA	-5	True	AATAAA	-20	NA	44291238	44238622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
Isoform_51183_70	chr15	-	3024	10	FSM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	-11	2064	4	844	multi-exon	FALSE	canonical	3	89	junction_5	79.6338844685826	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTGATGTTTGTTTT	NA	False	NA	-5	True	AATAAA	-20	NA	44291280	44238622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
Isoform_51185_124	chr15	-	2979	10	FSM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	31	2067	12	841	multi-exon	FALSE	canonical	3	89	junction_5	79.6338844685826	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTGTAGTGATGTTTGT	NA	False	NA	-8	True	AATAAA	-17	NA	44291238	44238625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
Isoform_51189_4	chr15	-	4785	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-359	5433	-9	249	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAGAAAAAAAAATGGC	9959	False	NA	NA	False	CATAAA	-39	NA	50753446	50523580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
Isoform_51190_6	chr15	-	4550	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-389	5698	-39	1	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAGGAA	9929	False	NA	NA	False	AATGAA	-42	NA	50753476	50523845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
Isoform_51191_6	chr15	-	4413	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-358	5804	-8	-105	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATTCCTTTTTTTTTTT	9960	False	NA	NA	False	ATTAAA	-33	NA	50753445	50523951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
Isoform_51192_3	chr15	-	4824	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-438	5473	-88	209	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCTAGCCAAATGAGAA	9880	False	NA	NA	False	NA	NA	NA	50753525	50523620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
Isoform_512_388	SIRV1	-	1362	6	FSM	SIRV1A	SIRV103	1363	6	1	0	1	0	multi-exon	FALSE	canonical	3	1304	junction_5	2022.74937646758	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10790	1000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
Isoform_51203_2195	chr15	-	1253	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	40	2	-29	-2	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	2195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTGTGTATTTATGG	NA	False	NA	-14	True	AATAAA	-22	NA	51728879	51649955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
Isoform_51204_375	chr15	-	1273	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	18	4	18	-4	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTGTGTGTATTTAT	NA	False	NA	-16	True	AATAAA	-20	NA	51728901	51649957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
Isoform_51239_592	chr15	-	3591	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	1	364	1	-364	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	-21	True	AATAAA	-20	NA	51855142	51825999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
Isoform_51240_1030	chr15	-	3539	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	52	365	52	-365	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGGAACATACTCAG	NA	False	NA	-22	True	AATAAA	-19	NA	51855091	51826000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
Isoform_51241_34	chr15	-	3648	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	-57	365	-57	-365	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGGAACATACTCAG	NA	False	NA	-22	True	AATAAA	-19	NA	51855200	51826000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
Isoform_51251_125	chr15	-	3466	11	FSM	ENSMUSG00000061731.10	ENSMUST00000077273.9	7663	11	-30	4227	-30	399	multi-exon	TRUE	canonical	3	89	junction_10	11.8574870862253	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGTGTTGGTTGTGTA	NA	False	NA	0	True	ATTAAA	-23	NA	53209585	52931660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_52932246_52936688_52936861_52939164_52939326_52946480_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52965201_52969422_52969531_52970873_52970968_53207797
Isoform_51252_92	chr15	-	3491	11	FSM	ENSMUSG00000061731.10	ENSMUST00000077273.9	7663	11	-55	4227	-55	399	multi-exon	FALSE	canonical	3	89	junction_10	11.8574870862253	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGTGTTGGTTGTGTA	NA	False	NA	0	True	ATTAAA	-23	NA	53209610	52931660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_52932246_52936688_52936861_52939164_52939326_52946480_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52965201_52969422_52969531_52970873_52970968_53207797
Isoform_51259_5	chr15	-	3225	14	ISM	ENSMUSG00000037343.9	ENSMUST00000041733.9	5031	26	23426	0	-2560	0	3prime_fragment	FALSE	canonical	3	170	junction_12	16.5554474490026	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTGCCTTTGTTTTTCT	8047	False	NA	-6	True	AATAAA	-18	NA	54912122	54878526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022
Isoform_51260_3	chr15	-	3694	18	ISM	ENSMUSG00000037343.9	ENSMUST00000041733.9	5031	26	16288	1	-3443	-1	3prime_fragment	FALSE	canonical	3	148	junction_17	19.2842514228885	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGCCTTTGTTTTTC	909	False	NA	-7	True	AATAAA	-17	NA	54919260	54878527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182
Isoform_51261_3	chr15	-	4390	22	ISM	ENSMUSG00000037343.9	ENSMUST00000041733.9	5031	26	9017	1	8764	-1	3prime_fragment	FALSE	canonical	3	148	junction_17	17.9114729064364	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGCCTTTGTTTTTC	NA	False	NA	-7	True	AATAAA	-17	NA	54926531	54878527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388
Isoform_51262_3	chr15	-	4670	24	ISM	ENSMUSG00000037343.9	ENSMUST00000041733.9	5031	26	6131	1	5878	-1	3prime_fragment	FALSE	canonical	3	148	junction_17	17.1875015036947	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGCCTTTGTTTTTC	NA	False	NA	-7	True	AATAAA	-17	NA	54929417	54878527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255
Isoform_51263_3	chr15	-	5421	25	ISM	ENSMUSG00000037343.9	ENSMUST00000041733.9	5031	26	7	2	7	-2	intron_retention	FALSE	canonical	3	148	junction_17	17.2167554047407	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935541	54878528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788
Isoform_51264_44	chr15	-	1499	10	FSM	ENSMUSG00000022422.14	ENSMUST00000110231.2	1499	10	1	-1	1	1	multi-exon	FALSE	canonical	3	26	junction_5	97.4314573887145	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATCCCTGACTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	54953875	54939496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54946800_54946990_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
Isoform_51266_352	chr15	-	1304	9	FSM	ENSMUSG00000022422.14	ENSMUST00000023059.13	1324	9	18	2	7	1	multi-exon	FALSE	canonical	3	218	junction_7	27.4268914571083	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATCCCTGACTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	54953869	54939496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
Isoform_51269_10	chr15	-	2354	10	NNC	ENSMUSG00000022422.14	novel	1499	10	NA	NA	-1800	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	82.6013780412953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATCCCTGACTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	54955687	54939496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621_54954754_54955521
Isoform_51272_628	chr15	-	788	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	435	0	-30	0	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420709	55397489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
Isoform_51273_10	chr15	-	1028	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	195	0	195	0	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420949	55397489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
Isoform_51274_66	chr15	-	694	6	FSM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	36	0	-30	0	multi-exon	FALSE	canonical	3	91	junction_4	366.126754007407	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420709	55397489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55418715_55418840_55420653
Isoform_51279_6	chr15	-	4751	7	FSM	ENSMUSG00000060429.13	ENSMUST00000039769.13	4919	7	164	4	-63	-4	multi-exon	FALSE	canonical	0	0	junction_6	17.2916164657906	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCCTAGGCTTATAAT	NA	False	NA	-2	True	AATAAA	-17	NA	55770181	55499787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55612583_55612792_55655429_55655647_55769419
Isoform_51280_13	chr15	-	3817	5	NNC	ENSMUSG00000060429.13	novel	4919	7	NA	NA	221654	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	6.21992765231236	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTAGGCTTATAATTT	9296	False	NA	0	True	AATAAA	-19	NA	55548052	55499785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55547801
Isoform_51286_88	chr15	-	2935	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-30	270	-30	-270	multi-exon	FALSE	canonical	3	365	junction_5	42.5977866628236	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTCTGTGTTAAGTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	57755874	57733167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
Isoform_51287_555	chr15	-	2908	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-3	270	-3	-270	multi-exon	TRUE	canonical	3	365	junction_5	42.5977866628236	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTCTGTGTTAAGTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	57755847	57733167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
Isoform_51307_907	chr15	-	1325	6	FSM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	0	16	0	-5	multi-exon	FALSE	canonical	3	653	junction_4	117.266534015464	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTCTCCCAGGTAA	NA	False	NA	-25	True	AATAAA	-24	NA	57897711	57885670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
Isoform_51308_465	chr15	-	1355	6	FSM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	-26	12	-16	-1	multi-exon	FALSE	canonical	3	653	junction_4	117.266534015464	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTCCCAGGTAATTTC	NA	False	NA	-21	True	AATAAA	-28	NA	57897737	57885666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
Isoform_51311_64	chr15	-	1413	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	316.693795329179	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTCTCCCAGGTAA	NA	False	NA	-25	True	AATAAA	-24	NA	57897711	57885670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895291_57895476_57897479
Isoform_51318_4	chr15	-	4888	5	FSM	ENSMUSG00000022361.15	ENSMUST00000110168.8	5212	5	19	305	-1	-3	multi-exon	FALSE	canonical	1	2	junction_2	17.7816619020833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGCTAATGTGGTCTGA	NA	False	NA	-4	True	ATTAAA	-18	NA	57939866	57910703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57912182_57915619_57918479_57927450_57927577_57932714_57932826_57939552
Isoform_51324_12	chr15	-	4500	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	264	0	9	0	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTAATGTGGTCTGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	57939601	57910700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
Isoform_51325_3	chr15	-	5072	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	-9	-299	-9	-3	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTTTGAGTGATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	57939874	57910401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
Isoform_51326_5	chr15	-	5041	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	26	-303	26	1	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGATTTTTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	57939839	57910397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
Isoform_51327_3	chr15	-	1880	3	FSM	ENSMUSG00000022362.14	ENSMUST00000176076.2	281	3	-238	-1361	-19	1242	multi-exon	FALSE	canonical	1	1	junction_1	19	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTAATGTGGTCTGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	57939840	57910700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57912182_57932714_57932826_57939552
Isoform_51341_456	chr15	-	5663	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	22	-1	22	1	multi-exon	TRUE	canonical	3	283	junction_25	31.7407623492731	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998456	57957440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
Isoform_51345_81	chr15	-	5719	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	-35	0	-35	0	multi-exon	FALSE	canonical	3	283	junction_25	31.7407623492731	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTCTAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-20	NA	57998513	57957441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
Isoform_51355_113	chr15	-	3737	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-102	112	6	-112	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATGTGGTTTTTGATTT	NA	False	NA	-25	True	NA	NA	NA	58695481	58654229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
Isoform_51360_26	chr15	-	3806	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-59	0	49	0	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGCTTCTGTATCTGCCC	NA	False	NA	87	True	AATAAA	-17	NA	58695438	58654117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
Isoform_51371_7	chr15	-	1973	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	-11	-1047	0	4	multi-exon	FALSE	canonical	3	68	junction_6	18.2181455270914	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTATCCTTGATCTC	NA	False	NA	1	True	AATAAA	-20	NA	58805587	58771775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
Isoform_51372_29	chr15	-	926	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	-11	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	18.2181455270914	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805587	58772822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
Isoform_51373_15	chr15	-	862	11	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	26.3417918904542	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805587	58772822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58798284_58798335_58800532_58800599_58805527
Isoform_51375_12	chr15	-	2960	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-139	5	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCTATAATCAAGC	2590	False	NA	0	True	AATAAA	-20	NA	58953993	58815203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_51376_39	chr15	-	5019	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGGTCTCCTTCAGA	2652	False	NA	NA	False	AATAAA	-19	NA	58953931	58813082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_51377_124	chr15	-	2986	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-57	-5	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACCTTGATCTTTTAAT	2672	False	NA	-3	True	ATTAAA	-19	NA	58953911	58815095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_51379_19	chr15	-	3035	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-104	-3	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGATCTTTTAATTT	2625	False	NA	-1	True	ATTAAA	-21	NA	58953958	58815093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_51380_4	chr15	-	5051	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-119	-10	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGAGTTCTCAGGT	2610	False	NA	NA	False	AATAAA	-9	NA	58953973	58813092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_51381_11	chr15	-	2792	13	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-56	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	20.5324945716134	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGATCTTTTAATTT	2673	False	NA	-1	True	ATTAAA	-21	NA	58953910	58815093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_51382_4	chr15	-	2848	13	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-116	-7	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	20.5324945716134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAACCTTGATCTTTTA	2613	False	NA	-5	True	ATTAAA	-17	NA	58953970	58815097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_51386_32	chr15	-	3033	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-57	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.5323674264364	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGATCTTTTAATTT	2672	False	NA	-1	True	ATTAAA	-21	NA	58953911	58815093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_58815980_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_51388_9	chr15	-	3082	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-108	-5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.5323674264364	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACCTTGATCTTTTAAT	2621	False	NA	-3	True	ATTAAA	-19	NA	58953962	58815095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_58815980_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_51393_15	chr15	-	2991	3	FSM	ENSMUSG00000022353.11	ENSMUST00000228655.2	2956	3	-57	22	-57	1	multi-exon	FALSE	canonical	3	76	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATTGTACTCT	2672	False	NA	NA	False	NA	NA	NA	58953911	58924618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_58926941_58930209_58930272_58953304
Isoform_51404_968	chr15	-	4052	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-19	0	-19	0	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246035	59203845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
Isoform_51405_15	chr15	-	4847	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-26	-788	-26	788	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAGAACATAAGA	NA	False	NA	NA	False	TATAAA	-14	NA	59246042	59203057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
Isoform_51406_23	chr15	-	4186	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-19	-134	-19	134	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTCTTCTAGCTGC	NA	False	NA	NA	False	AGTAAA	-14	NA	59246035	59203711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
Isoform_51415_37	chr15	-	5116	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	124	325	124	-325	multi-exon	FALSE	canonical	3	40	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGCTTCCTCTTTACT	NA	False	NA	-4	True	AATAAA	-18	NA	60696805	60691167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_60695841_60696362
Isoform_51417_6	chr15	-	5443	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	123	-1	123	1	multi-exon	FALSE	canonical	3	40	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTCCTTTTTTTTTCT	NA	False	NA	NA	False	AATACA	-15	NA	60696806	60690841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_60695841_60696362
Isoform_51418_37	chr15	-	5027	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	214	324	214	-324	multi-exon	FALSE	canonical	3	40	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTTCCTCTTTACTC	NA	False	NA	-3	True	AATAAA	-19	NA	60696715	60691166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_60695841_60696362
Isoform_51419_5	chr15	-	5253	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	85	227	85	-227	multi-exon	FALSE	canonical	3	40	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTATGACTTTCTC	NA	False	NA	94	True	AATAAA	-16	NA	60696844	60691069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_60695841_60696362
Isoform_51426_64	chr15	-	1965	13	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-113	-1	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	411.541310198624	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	8626	False	NA	-5	True	AATAAA	-21	NA	63869931	63802791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63869746
Isoform_51430_95	chr15	-	2161	14	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	363.626149130341	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	NA	False	NA	-5	True	AATAAA	-21	NA	63932373	63802791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63894418_63894470_63932043
Isoform_51438_525	chr15	-	1882	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	-113	1	-113	-1	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	8626	False	NA	-5	True	AATAAA	-21	NA	63869931	63802791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
Isoform_51444_1077	chr15	-	2050	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-153	-1	-18	-1	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	NA	False	NA	-5	True	AATAAA	-21	NA	63932345	63802791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
Isoform_51445_36	chr15	-	2152	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-256	0	-121	0	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932448	63802792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
Isoform_51447_45	chr15	-	3925	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-180	-1849	-45	2	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATTTGTATATATAT	NA	False	NA	-2	True	NA	NA	NA	63932372	63800943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
Isoform_51454_38	chr15	-	2027	12	FSM	ENSMUSG00000022378.15	ENSMUST00000063838.11	3797	12	-75	1845	-45	0	multi-exon	FALSE	canonical	3	62	junction_11	317.474070002523	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	-4	True	AATAAA	-22	NA	63932372	63802790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63932043
Isoform_51457_84	chr15	-	1843	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-113	-1	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	335.160260174144	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	8626	False	NA	-5	True	AATAAA	-21	NA	63869931	63802791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63869746
Isoform_51459_72	chr15	-	2004	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_10	331.600900217103	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932339	63802792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63894418_63894470_63932043
Isoform_51464_44	chr15	-	1799	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-113	-1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	398.425212555631	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	8626	False	NA	-5	True	AATAAA	-21	NA	63869931	63802791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63869746
Isoform_51474_41	chr15	-	4470	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177371.8	6164	28	11	1683	11	-1	multi-exon	FALSE	canonical	3	82	junction_19	14.5305128081956	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCTTGTTTCTGGTCA	NA	False	NA	-2	True	ATTAAA	-21	NA	64184511	63960388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_51475_27	chr15	-	6167	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177371.8	6164	28	-2	-1	-2	1	multi-exon	FALSE	canonical	3	82	junction_19	14.5305128081956	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTGACATCAGGCCAT	NA	False	NA	-7	True	AATAAA	-21	NA	64184524	63958704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_51477_5	chr15	-	4637	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177371.8	6164	28	-158	1685	-158	-1	multi-exon	FALSE	canonical	3	82	junction_19	14.5305128081956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATGCTTGTTTCTGGT	NA	False	NA	-4	True	ATTAAA	-19	NA	64184680	63960390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_5148_1211	chr10	-	2509	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-22	-4	-22	2	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTTCTCTTTGTG	-9	True	NA	-3	True	AATAAA	-16	NA	128401878	128393632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
Isoform_51480_3	chr15	-	4650	30	NIC	ENSMUSG00000022377.17	novel	4580	31	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	23.6466758642573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCTTGTTTCTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	64254847	63960389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
Isoform_51481_7	chr15	-	4535	30	NIC	ENSMUSG00000022377.17	novel	4580	31	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	23.6466758642573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCTTGTTTCTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	64254732	63960389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
Isoform_51482_9	chr15	-	4407	30	NIC	ENSMUSG00000022377.17	novel	4580	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	23.6466758642573	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCTTGTTTCTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	64254604	63960389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
Isoform_51483_5	chr15	-	6091	30	NIC	ENSMUSG00000022377.17	novel	4582	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	23.6466758642573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCTGACATCAGGCCA	NA	False	NA	-8	True	AATAAA	-20	NA	64254604	63958705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
Isoform_51484_7	chr15	-	6155	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	-59	-1681	-25	2	multi-exon	TRUE	canonical	3	46	junction_19	18.359240953674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGACATCAGGCCATT	NA	False	NA	-6	True	AATAAA	-22	NA	64184547	63958703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_51485_36	chr15	-	4433	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	-23	5	11	0	multi-exon	FALSE	canonical	3	46	junction_19	18.359240953674	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCTTGTTTCTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	64184511	63960389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_51486_5	chr15	-	5989	27	ISM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	70089	-1686	6	2	3prime_fragment	FALSE	canonical	3	36	junction_5	20.3393183224631	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGACATCAGGCCATT	NA	False	NA	-6	True	AATAAA	-22	NA	64184516	63958703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_51488_7	chr15	-	4357	27	ISM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	70036	-1	-47	-1	3prime_fragment	FALSE	canonical	3	36	junction_5	20.3393183224631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCTTGTTTCTGGTCA	NA	False	NA	-2	True	ATTAAA	-21	NA	64184569	63960388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_51489_3	chr15	-	6014	27	ISM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	70060	-1682	-23	-2	3prime_fragment	FALSE	canonical	3	36	junction_5	20.3393183224631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCATCTGACATCAGGC	NA	False	NA	-10	True	AATAAA	-18	NA	64184545	63958707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_5149_1937	chr10	-	1640	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-24	867	-24	-867	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCGTCAAGCCCCTCTTT	8668	False	NA	-9	True	AATAAA	-19	NA	128401880	128394503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
Isoform_51490_8	chr15	-	4304	27	ISM	ENSMUSG00000022377.17	ENSMUST00000177035.8	3228	28	37184	-908	-29	0	3prime_fragment	FALSE	canonical	3	36	junction_5	23.2403508003955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTTGTTTCTGGTCAC	NA	False	NA	-1	True	ATTAAA	-22	NA	64184551	63960387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_51492_13	chr15	-	991	8	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	-64	71686	-30	-1283	5prime_fragment	FALSE	canonical	3	103	junction_3	7.73542078324622	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCCTACTTCTAGCA	NA	False	NA	NA	False	GATAAA	-43	NA	64184552	64032070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_51495_3	chr15	-	1002	3	FSM	ENSMUSG00000022377.17	ENSMUST00000175710.8	985	3	-4	-13	-4	13	multi-exon	FALSE	canonical	3	120	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64184526	64062878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_64063479_64080332_64080406_64184197
Isoform_51496_223	chr15	-	2886	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	1	2	0	-2	multi-exon	FALSE	canonical	2	22	junction_13	7.67854152818099	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGTGTCTTTTCCTCT	NA	False	NA	-2	True	AATAAA	-16	NA	66841488	66801168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
Isoform_51498_15	chr15	-	2928	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	-42	3	-42	-3	multi-exon	FALSE	canonical	2	22	junction_13	7.67854152818099	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGTGTCTTTTCCTC	NA	False	NA	-3	True	AATAAA	-15	NA	66841531	66801169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
Isoform_51499_12	chr15	-	2952	16	NIC	ENSMUSG00000005125.14	novel	2889	16	NA	NA	0	1	intron_retention	FALSE	canonical	1	1	junction_15	12.2245654319489	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTTTCCTCTCCC	NA	False	NA	1	True	AATAAA	-19	NA	66841488	66801165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832465_66841352
Isoform_51500_5	chr15	-	2257	9	FSM	ENSMUSG00000013846.11	ENSMUST00000229028.2	5732	9	60	3415	10	-5	multi-exon	FALSE	canonical	1	1	junction_4	1.93649167310371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGAACATTTCCCGG	NA	False	NA	NA	False	AATAAA	-22	NA	67048619	66978138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355_66986207_67000401_67000457_67024891_67025020_67048480
Isoform_51501_3	chr15	-	2323	9	FSM	ENSMUSG00000013846.11	ENSMUST00000229028.2	5732	9	-6	3415	-6	-5	multi-exon	FALSE	canonical	1	1	junction_4	1.93649167310371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGAACATTTCCCGG	NA	False	NA	NA	False	AATAAA	-22	NA	67048685	66978138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355_66986207_67000401_67000457_67024891_67025020_67048480
Isoform_51502_3	chr15	-	2389	9	FSM	ENSMUSG00000013846.11	ENSMUST00000229028.2	5732	9	-72	3415	-72	-5	multi-exon	FALSE	canonical	1	1	junction_4	1.93649167310371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGAACATTTCCCGG	NA	False	NA	NA	False	AATAAA	-22	NA	67048751	66978138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355_66986207_67000401_67000457_67024891_67025020_67048480
Isoform_51503_42	chr15	-	4501	16	NIC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	-42	50	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	5.94194132137525	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCTGTTCCTTGTCC	NA	False	NA	NA	False	AATAAA	-5	NA	68130747	67955562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130516
Isoform_51506_70	chr15	-	3915	23	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	48.4420075881827	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72932893	72461468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72914025_72914053_72922443_72922573_72924010_72924157_72929770_72930364_72932809
Isoform_51509_384	chr15	-	3888	22	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.9692446667405	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72932893	72461468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
Isoform_51510_8	chr15	-	4104	22	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	-58	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.9692446667405	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTGTGTTGATTTCAGA	NA	False	NA	-3	True	AATAAA	-19	NA	72933111	72461470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
Isoform_51514_90	chr15	-	3603	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-9	10206	-9	1283	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTGGTAGGTAGATGC	4435	False	NA	-2	True	AATATA	-19	NA	73056793	72977898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
Isoform_51519_7	chr15	-	3625	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-31	10206	-31	1283	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTGGTAGGTAGATGC	4413	False	NA	-2	True	AATATA	-19	NA	73056815	72977898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
Isoform_51521_3	chr15	-	11081	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-31	2750	-31	-2750	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGAGGCTTCATGTCA	4413	False	NA	-2	True	TATAAA	-22	NA	73056815	72970442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
Isoform_51522_8	chr15	-	11059	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-8	2749	-8	-2749	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAGGCTTCATGTCAT	4436	False	NA	-1	True	TATAAA	-23	NA	73056792	72970441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
Isoform_51524_7	chr15	-	13790	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	1	9	1	-9	multi-exon	TRUE	canonical	3	61	junction_13	10.6510302057803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCCTATTCCGAAGGTG	4445	False	NA	-33	True	AATAAA	-26	NA	73056783	72967701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
Isoform_51529_9	chr15	-	4206	33	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	1	-231	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	54.0647398379942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1678	False	NA	-10	True	ATTAAA	-18	NA	73295039	73077181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
Isoform_51531_5	chr15	-	4422	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-15	-224	combination_of_known_splicesites	FALSE	canonical	3	10	junction_31	57.2755330401397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTAACTGACCTTCATT	1725	False	NA	-3	True	ATTAAA	-25	NA	73294992	73077174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73266496_73266594_73294857
Isoform_51532_4	chr15	-	4506	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-21	-230	combination_of_known_splicesites	FALSE	canonical	3	10	junction_31	57.2755330401397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1635	False	NA	-9	True	ATTAAA	-19	NA	73295082	73077180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73266496_73266594_73294857
Isoform_51533_5	chr15	-	4380	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-19	-232	combination_of_known_junctions	FALSE	canonical	3	34	junction_31	46.9187191954075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACTGGAGCTAACTGA	1637	False	NA	-11	True	ATTAAA	-17	NA	73295080	73077182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
Isoform_51534_23	chr15	-	4318	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-231	combination_of_known_junctions	FALSE	canonical	3	34	junction_31	46.9187191954075	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1700	False	NA	-10	True	ATTAAA	-18	NA	73295017	73077181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
Isoform_51535_6	chr15	-	4543	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-6	combination_of_known_junctions	FALSE	canonical	3	34	junction_31	46.9187191954075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAAGGTTGCATTGCCTT	1700	False	NA	-10	True	AATAAA	-38	NA	73295017	73076956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
Isoform_51536_4	chr15	-	4411	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	1	-231	combination_of_known_junctions	FALSE	canonical	3	16	junction_31	58.6938329288105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1678	False	NA	-10	True	ATTAAA	-18	NA	73295039	73077181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
Isoform_51538_7	chr15	-	4306	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	1	-232	combination_of_known_junctions	FALSE	canonical	3	22	junction_30	49.759882419852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACTGGAGCTAACTGA	1678	False	NA	-11	True	ATTAAA	-17	NA	73295039	73077182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266594_73294857
Isoform_51539_98	chr15	-	4186	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	1	230	1	-230	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1678	False	NA	-9	True	ATTAAA	-19	NA	73295039	73077180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
Isoform_51541_16	chr15	-	4414	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	1	2	1	-2	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGCATTGCCTTTTTT	1678	False	NA	-6	True	AATAAA	-42	NA	73295039	73076952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
Isoform_51542_7	chr15	-	4248	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	-62	231	27	-231	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1615	False	NA	-10	True	ATTAAA	-18	NA	73295102	73077181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
Isoform_51543_14	chr15	-	4089	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	1	-230	combination_of_known_junctions	FALSE	canonical	1	6	junction_30	42.3057784337895	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1678	False	NA	-9	True	ATTAAA	-19	NA	73295039	73077180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73294857
Isoform_51546_4	chr15	-	4213	33	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	0	-229	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.7686247303484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGAGCTAACTGACCT	1677	False	NA	-8	True	ATTAAA	-20	NA	73295040	73077179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
Isoform_51548_12	chr15	-	4321	33	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.3162093541538	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACTGGAGCTAACTGA	1700	False	NA	-11	True	ATTAAA	-17	NA	73295017	73077182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
Isoform_51549_4	chr15	-	4483	33	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.3162093541538	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1770	False	NA	-4	True	AATAAA	-44	NA	73294947	73076950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
Isoform_51550_7	chr15	-	4294	33	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	18	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.5509776835808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1695	False	NA	-10	True	ATTAAA	-18	NA	73295022	73077181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266594_73294857
Isoform_51551_47	chr15	-	4166	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.9541587944639	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACTGGAGCTAACTGA	1700	False	NA	-11	True	ATTAAA	-17	NA	73295017	73077182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
Isoform_51553_7	chr15	-	4231	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-19	-230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.9541587944639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1637	False	NA	-9	True	ATTAAA	-19	NA	73295080	73077180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
Isoform_51556_4	chr15	-	4639	2	FSM	ENSMUSG00000022607.19	ENSMUST00000227435.2	4580	2	-62	3	4	-3	multi-exon	FALSE	canonical	3	183	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATCAAAAAAAAAAAAAAAAA	1681	False	NA	NA	False	NA	NA	NA	73295036	73262133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_73266594_73294857
Isoform_51574_369	chr15	-	4430	8	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_7	37.6183845631741	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGCTGTGTTTATG	NA	False	NA	-6	True	AATAAA	-24	NA	73517551	73452141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
Isoform_51575_292	chr15	-	4463	8	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_7	37.6183845631741	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGCTGTGTTTATG	NA	False	NA	-6	True	AATAAA	-24	NA	73517584	73452141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
Isoform_51579_8	chr15	-	3806	7	NIC	ENSMUSG00000079020.10	novel	2457	7	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	108.730170605955	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGCTGTGTTTATG	NA	False	NA	-6	True	AATAAA	-24	NA	73517562	73452141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73517342
Isoform_51581_11	chr15	-	2021	2	FSM	ENSMUSG00000045281.6	ENSMUST00000064166.5	2144	2	123	0	123	0	multi-exon	FALSE	canonical	2	16	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGCCAACAGCCCAAG	NA	False	NA	NA	False	AATAAA	-19	NA	73579231	73566452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_73568412_73579169
Isoform_51583_64	chr15	-	3053	3	FSM	ENSMUSG00000022602.15	ENSMUST00000110009.4	3054	3	1	0	-1	0	multi-exon	FALSE	canonical	3	15	junction_2	19	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544418	74540931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74541843_74542028_74542166_74542413
Isoform_51584_17	chr15	-	3186	3	FSM	ENSMUSG00000022602.15	ENSMUST00000110009.4	3054	3	-132	0	-132	0	multi-exon	FALSE	canonical	3	15	junction_2	19	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544551	74540931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74541843_74542028_74542166_74542413
Isoform_51586_107	chr15	-	3056	3	FSM	ENSMUSG00000022602.15	ENSMUST00000023268.14	3055	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	30	junction_2	11.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544418	74540931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74541843_74542028_74542169_74542413
Isoform_51588_36	chr15	-	3188	3	FSM	ENSMUSG00000022602.15	ENSMUST00000023268.14	3055	3	-135	2	-133	-2	multi-exon	FALSE	canonical	3	30	junction_2	11.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGAGTATGTGCCATTT	NA	False	NA	-2	True	AATAAA	-12	NA	74544552	74540933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74541843_74542028_74542169_74542413
Isoform_51589_118	chr15	-	3307	1	NIC	ENSMUSG00000046380.4	novel	5853	2	NA	NA	1669	-2259	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTCATGATTCTTC	NA	False	NA	1	True	NA	NA	NA	74579715	74576408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_74576400_74579700
Isoform_51590_4	chr15	-	3276	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	253	2324	253	-2324	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGCTGAGTGTCGTCT	NA	False	NA	-64	True	NA	NA	NA	74581131	74576473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74579714_74581095
Isoform_51591_3	chr15	-	3597	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	-3	2259	-3	-2259	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTCATGATTCTTC	NA	False	NA	1	True	NA	NA	NA	74581387	74576408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74579714_74581095
Isoform_51592_7	chr15	-	4005	4	FSM	ENSMUSG00000022594.15	ENSMUST00000023259.15	4023	4	14	4	-8	-4	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTTTCTCTCAT	9954	False	NA	-8	True	AATAAA	-14	NA	74624881	74619704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74623277_74623391_74623494_74623703_74623887_74624733
Isoform_51595_4	chr15	-	774	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	18	-1	18	1	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTGACTTCTGT	794	False	NA	-1	True	ATTAAA	-19	NA	74671817	74668721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
Isoform_51596_62	chr15	-	621	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	171	-1	171	1	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTGACTTCTGT	947	False	NA	-1	True	ATTAAA	-19	NA	74671664	74668721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
Isoform_51597_3	chr15	-	872	4	FSM	ENSMUSG00000075602.11	ENSMUST00000186526.7	862	4	13	-23	-8	1	multi-exon	FALSE	canonical	0	0	junction_3	38.2738669184195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTCTCCATTTTTCTT	9624	False	NA	-2	True	AATAAA	-17	NA	74869764	74866724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869696
Isoform_51598_68	chr15	-	861	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187994.7	955	4	95	-1	-8	0	multi-exon	FALSE	canonical	3	72	junction_1	7.54247233265651	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTTCTCCATTTTTCT	9603	False	NA	-3	True	AATAAA	-16	NA	74869785	74866725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869727
Isoform_51599_6	chr15	-	869	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187171.2	853	4	56	-72	-3	-1	multi-exon	FALSE	canonical	2	2	junction_3	37.3452361977624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAAGTTCTCCATTTTT	9608	False	NA	-5	True	AATAAA	-14	NA	74869780	74866727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74867329_74868300_74868418_74869383_74869482_74869727
Isoform_516_2493	SIRV1	-	1298	4	FSM	SIRV1A	SIRV102	1300	4	1	1	1	-1	multi-exon	FALSE	canonical	3	4191	junction_1	833.052752764727	2493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTGAATCGATGCATA	NA	False	NA	NA	False	NA	NA	NA	10365	1007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
Isoform_51600_3	chr15	-	846	4	FSM	ENSMUSG00000079018.11	ENSMUST00000065408.16	844	4	-7	5	-7	-1	multi-exon	FALSE	canonical	3	16	junction_1	24.2257897474755	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATCTCTGTTTTTCTTA	9823	False	NA	NA	False	AATAAA	-18	NA	74920686	74916866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_74917460_74919201_74919319_74920290_74920374_74920633
Isoform_51601_134	chr15	-	1894	14	FSM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	10	-1	10	1	multi-exon	FALSE	canonical	3	71	junction_8	11.6872458678823	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTTGTCACTGTGACC	NA	False	NA	-6	True	AATAAA	-12	NA	75550639	75528882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
Isoform_51603_3	chr15	-	3210	12	NIC	ENSMUSG00000000934.10	novel	1903	14	NA	NA	5	-2	intron_retention	FALSE	canonical	3	71	junction_6	11.5372196831182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGTGTTTGTCACTGTG	NA	False	NA	-9	True	AATAAA	-9	NA	75550644	75528885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
Isoform_51606_283	chr15	-	3352	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	10	0	10	0	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713754	75626278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
Isoform_51608_34	chr15	-	3471	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	-109	0	-109	0	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713873	75626278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
Isoform_51610_20	chr15	-	2059	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	63.9518568925094	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713770	75626278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75713698
Isoform_51617_35	chr15	-	1709	13	FSM	ENSMUSG00000022574.8	ENSMUST00000023237.8	1898	13	182	7	-9	0	multi-exon	FALSE	canonical	3	20	junction_8	7.1351049201972	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGCCATGTGTCGTT	NA	False	NA	NA	False	CATAAA	-23	NA	75766148	75762811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
Isoform_51625_48	chr15	-	1037	9	NIC	ENSMUSG00000055762.17	novel	2842	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_5	1349.65903101487	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772539_75772612_75772980_75773105_75781093
Isoform_51629_176	chr15	-	975	8	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_7	1032.38266121806	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781153	75767336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781093
Isoform_51631_1864	chr15	-	978	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	51	1283	2	0	multi-exon	FALSE	canonical	3	2715	junction_5	241.1927842695	1864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781153	75767336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
Isoform_51634_25	chr15	-	903	7	FSM	ENSMUSG00000055762.17	ENSMUST00000116440.9	896	7	-7	0	2	0	multi-exon	FALSE	canonical	3	250	junction_6	1385.14264207297	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781153	75767336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773102_75781093
Isoform_51635_268	chr15	-	906	7	FSM	ENSMUSG00000055762.17	ENSMUST00000109972.9	1624	7	30	688	2	0	multi-exon	FALSE	canonical	3	464	junction_5	1042.33482571048	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781153	75767336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
Isoform_51639_354	chr15	-	1260	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	88	-9	88	9	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGAGTTGTACTTT	NA	False	NA	-4	True	NA	NA	NA	75793321	75788316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
Isoform_51640_16	chr15	-	1358	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	-17	-2	-17	2	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGACTTTAGTAGAGTT	NA	False	NA	-11	True	NA	NA	NA	75793426	75788323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
Isoform_51641_4	chr15	-	1250	6	NNC	ENSMUSG00000022571.10	novel	1339	6	NA	NA	283	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	105.344387605605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	False	NA	-13	True	NA	NA	NA	75793126	75788325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793030
Isoform_51642_7	chr15	-	2378	4	NIC	ENSMUSG00000022571.10	novel	1339	6	NA	NA	40	0	intron_retention	FALSE	canonical	3	262	junction_2	6.23609564462324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	False	NA	-13	True	NA	NA	NA	75793369	75788325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75790314_75790521_75790702_75791077_75791143_75793224
Isoform_51644_19	chr15	-	1359	11	NIC	ENSMUSG00000022570.8	novel	1405	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	180.942421781074	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8918	False	NA	-30	True	AATAAA	-14	NA	75801603	75796532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798591_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
Isoform_51648_224	chr15	-	1328	11	FSM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	14	-7	1	0	multi-exon	FALSE	canonical	3	182	junction_10	87.2147349935778	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8933	False	NA	-22	True	AATAAA	-22	NA	75801588	75796524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
Isoform_51649_84	chr15	-	1303	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	45	7	0	0	multi-exon	FALSE	canonical	3	225	junction_10	74.8304750753328	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8885	False	NA	-29	True	AATAAA	-15	NA	75801636	75796531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
Isoform_51650_556	chr15	-	1276	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	72	7	-7	0	multi-exon	FALSE	canonical	3	225	junction_10	74.8304750753328	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8912	False	NA	-29	True	AATAAA	-15	NA	75801609	75796531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
Isoform_51656_5	chr15	-	1968	2	FSM	ENSMUSG00000098176.3	ENSMUST00000183130.3	2458	2	487	3	487	-3	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCCCGTTGTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	75853804	75851723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75853537_75853649
Isoform_51658_11	chr15	-	4578	5	FSM	ENSMUSG00000046761.14	ENSMUST00000170153.2	4534	5	-51	7	-51	-7	multi-exon	FALSE	canonical	1	3	junction_2	2.06155281280883	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGATCCCAAGCCTCA	7371	False	NA	NA	False	AATAAA	-17	NA	75881398	75872948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75876599_75876789_75876915_75876983_75877149_75877949_75878412_75881222
Isoform_51661_115	chr15	-	5496	37	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	22	-6	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	77.9983529028374	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941581	75919012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
Isoform_51662_12	chr15	-	5527	37	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	77.9983529028374	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941612	75919012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
Isoform_51664_19	chr15	-	5508	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_26	92.1565152469924	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941595	75919011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
Isoform_51686_304	chr15	-	5413	36	FSM	ENSMUSG00000022568.18	ENSMUST00000063747.12	5440	36	22	5	22	-5	multi-exon	FALSE	canonical	3	271	junction_30	52.1302607094253	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941581	75919011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
Isoform_51687_65	chr15	-	5445	36	FSM	ENSMUSG00000022568.18	ENSMUST00000063747.12	5440	36	-10	5	-10	-5	multi-exon	FALSE	canonical	3	271	junction_30	52.1302607094253	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941613	75919011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
Isoform_51689_7	chr15	-	5488	35	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	11	-6	intron_retention	FALSE	canonical	3	271	junction_29	51.9359217247362	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941592	75919012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
Isoform_51690_51	chr15	-	5410	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_25	73.294062459634	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941581	75919011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
Isoform_51697_496	chr15	-	1869	12	FSM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	5	7	-4	1	multi-exon	FALSE	canonical	3	225	junction_7	445.848082194703	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGAAGTCCCTGTGTCTG	NA	False	NA	-7	True	CATAAA	-18	NA	75952757	75942037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
Isoform_51705_1881	chr15	-	1823	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	4	-6	-4	-2	multi-exon	FALSE	canonical	3	1143	junction_7	140.604729650179	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCTGTGTCTGAAATT	NA	False	NA	-2	True	CATAAA	-23	NA	75952757	75942032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
Isoform_51706_122	chr15	-	1849	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	-27	-1	-15	1	multi-exon	FALSE	canonical	3	1143	junction_7	140.604729650179	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGAAGTCCCTGTGTCTG	NA	False	NA	-7	True	CATAAA	-18	NA	75952788	75942037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
Isoform_51716_3	chr15	-	3116	18	FSM	ENSMUSG00000075590.5	ENSMUST00000228366.3	3192	18	0	76	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.12091251497882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCATGGTCTGACATAG	NA	False	NA	1	True	AATAAA	-44	NA	75963476	75957442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75960713_75960847_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962136_75962301_75962392_75962486_75962589_75962656_75962780_75963219
Isoform_51717_3	chr15	-	3474	16	NIC	ENSMUSG00000075590.5	novel	3220	17	NA	NA	-97	0	intron_retention	FALSE	canonical	0	0	junction_3	2.12916258968951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCATGGTCTGACATAG	NA	False	NA	1	True	AATAAA	-44	NA	75963573	75957442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75960713_75960847_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962589_75962656_75962780_75963219
Isoform_51718_4	chr15	-	2086	2	ISM	ENSMUSG00000118671.1	ENSMUST00000239552.1	12332	3	1039	21558	1039	-21558	5prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAACAAGAGATACTC	9821	False	NA	NA	False	NA	NA	NA	76003356	75994887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_75996926_76003308
Isoform_51719_3	chr15	-	8031	2	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	16572	-1	8905	0	3prime_fragment	FALSE	canonical	3	60	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGTCTTGCCTTGTGC	8228	False	NA	-8	True	AATAAA	-17	NA	76063338	76055174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76062586_76062718
Isoform_51725_5	chr15	-	2216	17	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	-44	17273	-44	215	5prime_fragment	FALSE	canonical	3	16	junction_16	10.1296285716703	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCAAGGAGATCC	984	False	NA	NA	False	AATGAA	-4	NA	76079954	76072448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76079623
Isoform_51726_10	chr15	-	2019	17	ISM	ENSMUSG00000022565.16	ENSMUST00000071869.12	14917	32	67	17275	67	215	5prime_fragment	FALSE	canonical	3	21	junction_16	9.19047570858005	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCAAGGAGATCC	NA	False	NA	NA	False	AATGAA	-4	NA	76093298	76072448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76093164
Isoform_51727_11	chr15	-	2017	17	ISM	ENSMUSG00000022565.16	ENSMUST00000074834.12	14855	32	-3	17285	-3	204	5prime_fragment	FALSE	canonical	3	10	junction_16	11.3247516529061	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATGAAGGAAAAGAAAAT	5604	False	NA	NA	False	NA	NA	NA	76113700	76072459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76113557
Isoform_51728_7	chr15	-	2132	16	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	12	17487	12	1	5prime_fragment	FALSE	canonical	3	16	junction_15	10.3965806344629	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCAGCGTTTCCTCCTT	1040	False	NA	NA	False	AAGAAA	-14	NA	76079898	76072662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76079623
Isoform_51730_9	chr15	-	3277	11	FSM	ENSMUSG00000063268.13	ENSMUST00000075689.7	3284	11	3	4	3	-4	multi-exon	FALSE	canonical	1	1	junction_2	1.74355957741627	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTTAGAAGGACCGGC	NA	False	NA	NA	False	AATAAA	-12	NA	76127638	76117206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76117807_76117897_76118073_76124248_76124383_76124486_76125132_76125355_76125429_76125525_76125748_76125857_76126523_76126602_76126840_76126931_76127187_76127263_76127443_76127546
Isoform_51731_9	chr15	-	4503	26	ISM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	-4	0	-4	0	intron_retention	TRUE	canonical	2	7	junction_11	7.11550419857933	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9179	False	NA	-19	True	AATAAA	-17	NA	76191449	76180802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674
Isoform_51733_29	chr15	-	3990	27	FSM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	-20	0	-20	0	multi-exon	FALSE	canonical	2	7	junction_11	7.05305339056621	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9163	False	NA	-19	True	AATAAA	-17	NA	76191465	76180802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
Isoform_51734_6	chr15	-	4091	27	FSM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	-121	0	23	0	multi-exon	FALSE	canonical	2	7	junction_11	7.05305339056621	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9062	False	NA	-19	True	AATAAA	-17	NA	76191566	76180802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
Isoform_51735_62	chr15	-	1320	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	414	0	-6	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8527	False	NA	-3	True	ATTAAA	-16	NA	76234897	76231239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
Isoform_51737_19	chr15	-	1718	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	16	0	15	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8129	False	NA	-3	True	ATTAAA	-16	NA	76235295	76231239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
Isoform_51739_11	chr15	-	1175	8	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	47.1584389833563	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8497	False	NA	-3	True	ATTAAA	-16	NA	76234927	76231239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234680
Isoform_5175_19	chr10	-	6021	28	FSM	ENSMUSG00000018166.9	ENSMUST00000082059.7	6016	28	-11	6	-11	-6	multi-exon	FALSE	canonical	0	0	junction_1	16.414470513838	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTTGTGGATT	NA	False	NA	-6	True	AATAAA	-15	NA	128425532	128403397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128425288
Isoform_51753_1248	chr15	-	2452	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	33	6	33	-6	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGACCCTGGCTGGCAG	NA	False	NA	-40	True	AATAAA	-14	NA	76361444	76337194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
Isoform_51755_658	chr15	-	2494	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	-2	-1	-2	1	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGCAGCAGAGTC	NA	False	NA	-33	True	AATAAA	-21	NA	76361479	76337187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
Isoform_51763_43	chr15	-	2531	15	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	26	-6	intron_retention	FALSE	canonical	3	559	junction_10	44.3286082592729	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGACCCTGGCTGGCAG	NA	False	NA	-40	True	AATAAA	-14	NA	76361451	76337194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
Isoform_51769_69	chr15	-	1779	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	108	1	-17	-1	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGGGGTTGTGGAGG	NA	False	NA	-6	True	AATAAA	-17	NA	76396043	76386215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
Isoform_5177_7	chr10	-	5854	28	NNC	ENSMUSG00000018166.9	novel	6016	28	NA	NA	-902	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.6093665213766	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGTTTTTGTGGAT	NA	False	NA	-7	True	AATAAA	-14	NA	128426423	128403398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128426345
Isoform_51771_24	chr15	-	1939	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	-51	0	-49	0	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396202	76386214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
Isoform_51772_54	chr15	-	1836	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	52	0	52	0	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396099	76386214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
Isoform_51774_88	chr15	-	2092	7	FSM	ENSMUSG00000022559.9	ENSMUST00000229813.2	2091	7	0	-1	0	1	multi-exon	TRUE	canonical	3	158	junction_6	11.5325625946708	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTATTTATTTA	NA	False	NA	NA	False	AATAAA	-13	NA	76422946	76419928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922
Isoform_51775_79	chr15	-	1970	8	FSM	ENSMUSG00000022559.9	ENSMUST00000230513.2	1953	8	-20	3	-9	0	multi-exon	FALSE	canonical	3	133	junction_7	19.025224930956	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422955	76419929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
Isoform_51776_279	chr15	-	1721	9	FSM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	-20	9	-9	0	multi-exon	FALSE	canonical	3	128	junction_8	22.8988946239769	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422955	76419929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
Isoform_51782_67	chr15	-	4418	37	FSM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	-7	-1	-7	1	multi-exon	FALSE	canonical	3	40	junction_1	98.8724822532214	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491718	76480007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
Isoform_51819_262	chr15	-	4507	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	8	3	8	0	multi-exon	FALSE	canonical	3	484	junction_25	49.8187687746518	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491783	76480008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
Isoform_5182_6385	chr10	-	436	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	246	-1	23	1	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	6385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462370	128460404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
Isoform_51820_961	chr15	-	4428	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	88	2	8	1	multi-exon	TRUE	canonical	3	484	junction_25	49.8187687746518	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491703	76480007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
Isoform_51838_577	chr15	-	2219	12	FSM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	538	-7	2	-1	multi-exon	FALSE	canonical	3	334	junction_11	41.2272476696326	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8668	False	NA	-3	True	AATAAA	-20	NA	76501046	76496583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
Isoform_51839_404	chr15	-	2243	12	FSM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	514	-7	-22	-1	multi-exon	FALSE	canonical	3	334	junction_11	41.2272476696326	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8644	False	NA	-3	True	AATAAA	-20	NA	76501070	76496583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
Isoform_51843_53	chr15	-	1934	11	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	121.107555503362	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8668	False	NA	-3	True	AATAAA	-20	NA	76501046	76496583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500772
Isoform_51845_18	chr15	-	1761	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	3	43	junction_9	124.308258816044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8644	False	NA	-4	True	AATAAA	-19	NA	76501070	76496584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76500772
Isoform_51846_24	chr15	-	1738	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	43	junction_9	124.308258816044	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8668	False	NA	-3	True	AATAAA	-20	NA	76501046	76496583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76500772
Isoform_51848_18	chr15	-	2096	11	FSM	ENSMUSG00000063354.8	ENSMUST00000073428.7	2063	11	-34	1	-34	-1	multi-exon	FALSE	canonical	3	24	junction_5	124.203099800287	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8632	False	NA	-3	True	AATAAA	-20	NA	76501082	76496583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
Isoform_51849_29	chr15	-	2060	11	FSM	ENSMUSG00000063354.8	ENSMUST00000073428.7	2063	11	2	1	2	-1	multi-exon	FALSE	canonical	3	24	junction_5	124.203099800287	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8668	False	NA	-3	True	AATAAA	-20	NA	76501046	76496583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
Isoform_51853_484	chr15	-	902	10	FSM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	10	-1	5	0	multi-exon	TRUE	canonical	3	892	junction_9	85.8889607589177	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGGCAGCTATACTG	9613	False	NA	-24	True	AATAAA	-18	NA	76510264	76506307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
Isoform_51854_32	chr15	-	998	10	FSM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	-57	0	6	0	multi-exon	FALSE	canonical	3	74	junction_8	311.796586112021	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9614	False	NA	-25	True	AATAAA	-17	NA	76510263	76506308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508919_76509333_76509406_76510188
Isoform_51855_8	chr15	-	862	9	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	331.20912483656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTGGGCAGCTATAC	9622	False	NA	-26	True	AATAAA	-16	NA	76510255	76506309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76509333_76509406_76510188
Isoform_51856_20	chr15	-	1504	9	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	892	junction_8	91.0971322270904	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTGGGCAGCTATAC	9600	False	NA	-26	True	AATAAA	-16	NA	76510277	76506309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
Isoform_51867_294	chr15	-	4196	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	40	-1	11	1	multi-exon	FALSE	canonical	3	178	junction_21	25.6881606970994	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524118	76510436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
Isoform_51870_7	chr15	-	4509	25	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-15	1	intron_retention	FALSE	canonical	3	182	junction_12	25.1047458439413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524173	76510436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
Isoform_51875_246	chr15	-	1829	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-9	1160	combination_of_known_junctions	FALSE	canonical	3	230	junction_1	231.34534070663	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTTTTGTTGGAGGG	NA	False	NA	-1	True	ATTAAA	-20	NA	76541129	76529966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
Isoform_51876_92	chr15	-	3807	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	2	-383	combination_of_known_junctions	FALSE	canonical	3	230	junction_1	231.34534070663	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAAGTGTTTTTATGGTT	NA	False	NA	-4	True	AATAAA	-20	NA	76541118	76527977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
Isoform_51877_19	chr15	-	3925	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	0	-267	combination_of_known_junctions	TRUE	canonical	3	230	junction_1	231.34534070663	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTCTGTGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	76541120	76527861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
Isoform_51880_128	chr15	-	1785	4	FSM	ENSMUSG00000053929.18	ENSMUST00000229524.2	1513	4	-213	-59	-9	4	multi-exon	FALSE	canonical	3	120	junction_1	282.269768523344	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTATCCTGTCTGTGTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	76541129	76531131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76531896_76532298_76532511_76533140_76533380_76540559
Isoform_51883_367	chr15	-	1857	4	FSM	ENSMUSG00000053929.18	ENSMUST00000176274.2	1854	4	-9	6	-9	3	multi-exon	FALSE	canonical	3	306	junction_1	196.445638508186	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTATCCTGTCTGTGTGT	NA	False	NA	-7	True	AATAAA	-18	NA	76541129	76531132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76531969_76532298_76532511_76533140_76533380_76540559
Isoform_51885_17	chr15	-	1247	2	FSM	ENSMUSG00000053929.18	ENSMUST00000231152.2	1271	2	17	7	-6	0	multi-exon	FALSE	canonical	3	79	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTATGGAATTTGTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	76543939	76542339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76543066_76543418
Isoform_51886_23	chr15	-	1125	3	FSM	ENSMUSG00000053929.18	ENSMUST00000177359.2	1110	3	-16	1	-16	-1	multi-exon	FALSE	canonical	3	19	junction_2	30	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGTATGGAATTTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	76544333	76542340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76543066_76543418_76543640_76544154
Isoform_51887_13	chr15	-	1679	3	FSM	ENSMUSG00000033837.6	ENSMUST00000230207.2	507	3	-77	-1095	69	395	multi-exon	FALSE	canonical	3	24	junction_2	159.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAAGTCTGGTATTGGG	NA	False	NA	-5	True	AGTAAA	-19	NA	76554079	76552029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76553341_76553428_76553522_76553804
Isoform_51889_379	chr15	-	1689	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	70	-394	70	394	multi-exon	FALSE	canonical	3	304	junction_2	19.5	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAAGTCTGGTATTGG	NA	False	NA	-6	True	AGTAAA	-18	NA	76554078	76552030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76553341_76553428_76553534_76553804
Isoform_5189_5	chr10	-	4098	2	ISM	ENSMUSG00000002578.19	ENSMUST00000133342.10	5150	8	10071	2	8728	-2	3prime_fragment	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGTTTGTTCTTGAA	NA	False	NA	NA	False	AATAAA	-13	NA	128471789	128466713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_128470681_128471658
Isoform_51895_43	chr15	-	3896	22	FSM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	-5	5	-5	2	multi-exon	FALSE	canonical	3	37	junction_12	16.3579572820053	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGCTTTCTGGTAA	NA	False	NA	-10	True	AATAAA	-14	NA	76594738	76587757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
Isoform_51896_20	chr15	-	3944	22	FSM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	-49	1	-34	-1	multi-exon	FALSE	canonical	3	37	junction_12	16.3579572820053	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594782	76587753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
Isoform_51897_3	chr15	-	3772	21	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	25	-1	intron_retention	FALSE	canonical	0	0	junction_19	20.8731286586367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594708	76587753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594477_76594512_76594592
Isoform_51898_26	chr15	-	2187	2	FSM	ENSMUSG00000116138.2_ENSMUSG00000033707.10	ENSMUST00000230559.2	740	2	-453	-994	2	0	multi-exon	FALSE	canonical	3	37	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATTGACTTTAAATGA	9311	False	NA	-4	True	ATTAAA	-23	NA	76608038	76605664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76607184_76607370
Isoform_51899_4	chr15	-	3228	2	FSM	ENSMUSG00000116138.2_ENSMUSG00000033707.10	ENSMUST00000230559.2	740	2	-453	-2035	2	-796	multi-exon	FALSE	canonical	3	37	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAAAGGAAAGAAA	9311	False	NA	NA	False	NA	NA	NA	76608038	76604623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76607184_76607370
Isoform_5190_16	chr10	-	2338	4	FSM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	159	0	159	0	multi-exon	FALSE	canonical	3	11	junction_3	1.88561808316413	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGAATCTCTTGGGCC	8751	False	NA	-7	True	AATAAA	-18	NA	128509783	128505762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128507796_128507972_128508151_128508407_128508472_128509720
Isoform_51900_57	chr15	-	1754	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	1	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATTGACTTTAAATGA	9309	False	NA	-4	True	ATTAAA	-23	NA	76608040	76605664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76607184_76607370_76607420_76607854
Isoform_51901_3	chr15	-	2784	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	13	-1043	-3	1043	multi-exon	FALSE	canonical	3	37	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGGAAAGAAAAA	9322	False	NA	NA	False	NA	NA	NA	76608027	76604621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76607184_76607370_76607420_76607854
Isoform_51903_93	chr15	-	4582	12	FSM	ENSMUSG00000033697.17	ENSMUST00000239003.2	4587	12	5	0	5	0	multi-exon	FALSE	canonical	3	33	junction_5	14.9749101461177	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8174	False	NA	-4	True	AATAAA	-17	NA	76702365	76608184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
Isoform_51905_52	chr15	-	4491	11	FSM	ENSMUSG00000033697.17	ENSMUST00000239134.2	4494	11	3	0	3	0	multi-exon	FALSE	canonical	3	26	junction_5	15.2761251631426	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8172	False	NA	-4	True	AATAAA	-17	NA	76702367	76608184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
Isoform_51907_3	chr15	-	4730	11	NIC	ENSMUSG00000033697.17	novel	4587	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	33	junction_4	15.4534785728004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGATTGTGTTTCTTTC	8170	False	NA	-6	True	AATAAA	-15	NA	76702369	76608186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
Isoform_51910_21	chr15	-	2791	5	ISM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	-37	2408	4	-2408	5prime_fragment	FALSE	canonical	3	59	junction_3	12.5573683548744	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAGAAAAA	8173	False	NA	NA	False	NA	NA	NA	76702366	76620064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
Isoform_51912_5	chr15	-	543	3	FSM	ENSMUSG00000033697.17	ENSMUST00000177026.3	371	3	-174	2	0	-2	multi-exon	FALSE	canonical	2	6	junction_1	42	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTTCAGCCCATGTT	8169	False	NA	NA	False	NA	NA	NA	76702370	76642246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76642444_76649684_76649852_76702191
Isoform_51913_14	chr15	-	619	3	FSM	ENSMUSG00000033697.17	ENSMUST00000176219.9	542	3	-86	9	-22	-5	multi-exon	FALSE	canonical	3	22	junction_1	34	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAAAGTTCAGCCCAT	8147	False	NA	NA	False	NA	NA	NA	76702392	76642249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76642501_76649684_76649852_76702191
Isoform_51914_3	chr15	-	1644	3	FSM	ENSMUSG00000022526.9	ENSMUST00000229494.2	2855	3	-43	1254	-25	-1254	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTAAATATAATTCAGAC	NA	False	NA	NA	False	AATAAA	-41	NA	76755660	76738463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76738815_76754006_76754121_76754481
Isoform_51915_3	chr15	-	4325	4	FSM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	30	-319	3	319	multi-exon	FALSE	canonical	3	11	junction_3	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTAGTTTGTGTGG	NA	False	NA	NA	False	AATAAA	-22	NA	76755605	76735489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852
Isoform_51916_32	chr15	-	3999	4	FSM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	30	7	3	-7	multi-exon	FALSE	canonical	3	11	junction_3	4.24264068711928	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATATCAGTCTGTAG	NA	False	NA	NA	False	ATTAAA	-10	NA	76755605	76735815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852
Isoform_51918_3	chr15	-	2650	7	NIC	ENSMUSG00000054967.8	novel	644	6	NA	NA	17	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	9.7082439194738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGATGGCTCTGAGTTT	8502	False	NA	NA	False	ATTAAA	-22	NA	76809631	76794572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805048_76805227_76805315_76805595_76809575
Isoform_51919_5	chr15	-	2506	7	NNC	ENSMUSG00000054967.8	novel	644	6	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	10.0567832276971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGGCTCTGAGTTTG	8504	False	NA	NA	False	ATTAAA	-23	NA	76809629	76794571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805048_76805227_76805315_76805452_76809575
Isoform_51920_3	chr15	-	2613	8	NNC	ENSMUSG00000054967.8	novel	644	6	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.2379844955251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGGCTCTGAGTTTG	8509	False	NA	NA	False	ATTAAA	-23	NA	76809624	76794571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805048_76805227_76805315_76805452_76807427_76807540_76809575
Isoform_51921_5	chr15	-	2359	5	FSM	ENSMUSG00000054967.8	ENSMUST00000229055.2	2212	5	-148	1	-148	-1	multi-exon	FALSE	canonical	3	11	junction_4	6.04152298679729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGGCTCTGAGTTTG	8337	False	NA	NA	False	ATTAAA	-23	NA	76809796	76794571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76809575
Isoform_51922_23	chr15	-	2197	5	FSM	ENSMUSG00000054967.8	ENSMUST00000229055.2	2212	5	16	-1	16	1	multi-exon	FALSE	canonical	3	11	junction_4	6.04152298679729	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGCTCTGAGTTTGTT	8501	False	NA	NA	False	ATTAAA	-25	NA	76809632	76794569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76809575
Isoform_51926_4	chr15	-	1784	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-19	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	49.3316274559802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACGTCTGTATGTCCAC	NA	False	NA	NA	False	AAAAAG	-10	NA	77190824	76967993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77115586_77115638_77190563
Isoform_51927_5	chr15	-	6545	13	FSM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	-41	-4810	-9	0	multi-exon	FALSE	canonical	2	23	junction_12	49.6258221314491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77037995	76963189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
Isoform_5193_585	chr10	-	3187	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	-24	17	-24	-17	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	128532157	128513060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
Isoform_51931_5	chr15	-	2166	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATAGTGC	NA	False	NA	NA	False	TTTAAA	-11	NA	77191225	76968015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_51934_17	chr15	-	6584	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77190817	76963189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_51936_4	chr15	-	7059	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-91	-2	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCCTGGCGTTTTGGCT	NA	False	NA	-10	True	AATAAA	-12	NA	77191295	76963192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_51937_4	chr15	-	6883	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCCTGGCGTTTTGGCT	NA	False	NA	-10	True	AATAAA	-12	NA	77191119	76963192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_51940_4	chr15	-	3204	13	NIC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	-31	1151	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	44.7278033094505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCATCCTTTTGTAAGC	NA	False	NA	0	True	ATTAAA	-21	NA	77190836	76966537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
Isoform_51942_7	chr15	-	6041	10	ISM	ENSMUSG00000033565.19	ENSMUST00000166610.8	6573	13	40032	-1	19000	0	3prime_fragment	FALSE	non_canonical	0	0	junction_5	61.4740736277909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	76997980	76963189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804
Isoform_51944_3	chr15	-	6537	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	43	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	64.6336970387692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	77190762	76963190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77115586_77115638_77190563
Isoform_51945_3	chr15	-	6545	13	FSM	ENSMUSG00000033565.19	ENSMUST00000166610.8	6573	13	26	2	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_5	66.7536931978715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCCTGGCGTTTTGGCT	NA	False	NA	-10	True	AATAAA	-12	NA	77037986	76963192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
Isoform_51946_16	chr15	-	6578	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	329	0	6	0	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77190799	76963189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_51948_5	chr15	-	2065	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	37	4805	37	1	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGTCTGTATGTCCA	NA	False	NA	NA	False	AAAAAG	-9	NA	77191091	76967994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_51949_6	chr15	-	1633	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	283	4991	-40	-73	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTTTTGTTCCAAAGA	NA	False	NA	NA	False	TTTAAA	-11	NA	77190845	76968180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_5195_31	chr10	-	3279	6	NNC	ENSMUSG00000000711.4	novel	3180	6	NA	NA	34	-17	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	69.0408574686033	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	128532092	128513060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128531897
Isoform_51952_3	chr15	-	1720	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-13	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	63.47369315096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATAGTGC	NA	False	NA	NA	False	TTTAAA	-11	NA	77190818	76968015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
Isoform_5196_23	chr10	-	3324	6	NNC	ENSMUSG00000000711.4	novel	3180	6	NA	NA	-4	-17	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	69.0408574686033	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	128532137	128513060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128531897
Isoform_52_111	ERCC-00035	+	1113	1	FSM	ERCC-00035A	DQ459413	1114	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00035_+_0_1100
Isoform_520_864	SIRV1	-	972	3	FSM	SIRV1A	SIRV106	973	3	1	0	1	0	multi-exon	FALSE	canonical	2	497	junction_2	204	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10785	1000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV1_-_1485_7552_7809_10553
Isoform_52019_260	chr15	-	7399	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	33	1	33	-1	multi-exon	TRUE	canonical	3	307	junction_27	78.3427565254121	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	NA	False	NA	-3	True	AATAAA	-16	NA	77726342	77644787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
Isoform_52020_17	chr15	-	6446	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	9	978	9	-978	multi-exon	FALSE	canonical	3	307	junction_27	78.3427565254121	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTAGTAGTGTTACCC	NA	False	NA	-1	True	GATAAA	-16	NA	77726366	77645764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
Isoform_5203_79	chr10	-	3117	7	ISM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-3	0	-2	0	intron_retention	FALSE	canonical	3	682	junction_2	229.276155662894	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8245	False	NA	-21	True	ATTAAA	-15	NA	128540902	128533812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794
Isoform_52033_1234	chr15	-	1265	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	33	0	1	0	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	1234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGCTGTTCTGTGGGC	2748	False	NA	-5	True	AATAAA	-19	NA	77813173	77799246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
Isoform_52039_27	chr15	-	4870	9	FSM	ENSMUSG00000016552.14	ENSMUST00000117725.2	4347	9	-32	-491	15	-2	multi-exon	FALSE	canonical	3	12	junction_8	16.6203000875435	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTTCTGCTCTGGCA	8674	False	NA	-4	True	AATAAA	-17	NA	77840907	77824727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840668
Isoform_52041_99	chr15	-	4771	9	FSM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	15	7	15	-3	multi-exon	TRUE	canonical	3	38	junction_8	9.62337648645214	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAATTTCTGCTCTGGC	8674	False	NA	-5	True	AATAAA	-16	NA	77840907	77824728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
Isoform_52065_129	chr15	-	1847	15	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	104	-4	combination_of_known_junctions	FALSE	canonical	3	103	junction_14	427.115718201396	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTCGTCCTGTGCTCC	3017	False	NA	-15	True	AATAAA	-20	NA	77854741	77843201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854658
Isoform_52067_63	chr15	-	1871	15	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	81	-3	combination_of_known_junctions	FALSE	canonical	3	103	junction_14	427.115718201396	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2994	False	NA	-14	True	AATAAA	-21	NA	77854764	77843200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854658
Isoform_52068_5247	chr15	-	1862	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	34	3	18	-3	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	5247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2779	False	NA	-14	True	AATAAA	-21	NA	77854979	77843200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
Isoform_5207_1367	chr10	-	2405	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	1	0	1	0	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8249	False	NA	-21	True	ATTAAA	-15	NA	128540898	128533812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
Isoform_52070_202	chr15	-	1907	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	-11	3	-11	-3	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2734	False	NA	-14	True	AATAAA	-21	NA	77855024	77843200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
Isoform_52083_77	chr15	-	1006	7	FSM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	6	1	6	-1	multi-exon	FALSE	canonical	0	0	junction_3	104.002270274366	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGGCTTCTGTTCTTAG	NA	False	NA	-3	True	AATAAA	-13	NA	78058301	78043663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
Isoform_52086_384	chr15	-	1115	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	26	3	26	-3	multi-exon	FALSE	canonical	3	371	junction_1	0	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTGTCTGCCTCCTTG	8110	False	NA	-6	True	AATAAA	-14	NA	78290081	78283758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78284231_78289438
Isoform_52087_98	chr15	-	1649	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	-506	1	-506	-1	multi-exon	FALSE	canonical	3	371	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTCTGCCTCCTTGCC	7578	False	NA	-4	True	AATAAA	-16	NA	78290613	78283756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78284231_78289438
Isoform_52090_3	chr15	-	2191	3	FSM	ENSMUSG00000022440.10	ENSMUST00000147093.2	2191	3	-2	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGCCTGGTACTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	78413827	78407547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78409388_78411427_78411669_78413717
Isoform_52091_18	chr15	-	2401	3	FSM	ENSMUSG00000022440.10	ENSMUST00000023075.9	2402	3	0	1	0	-1	multi-exon	FALSE	canonical	1	2	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGCCTGGTACTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	78413825	78407546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78409599_78411427_78411669_78413717
Isoform_52092_15	chr15	-	1334	7	FSM	ENSMUSG00000033220.8	ENSMUST00000043214.8	3038	7	22	1682	20	1046	multi-exon	FALSE	canonical	3	13	junction_3	5.64702478203247	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTGCAGTGAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	78456961	78445048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78445686_78446105_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
Isoform_52093_9	chr15	-	1735	6	NIC	ENSMUSG00000033220.8	novel	3038	7	NA	NA	15	1022	intron_retention	FALSE	canonical	3	13	junction_2	6.04648658313239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGTGTTGATTCTT	NA	False	NA	NA	False	NA	NA	NA	78456966	78445072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
Isoform_52094_3	chr15	-	366	2	FSM	ENSMUSG00000116097.2	ENSMUST00000229702.2	394	2	28	0	28	0	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGCTGTGGTCGGAGTAT	2881	False	NA	-3	True	NA	NA	NA	78465788	78458610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78458873_78465684
Isoform_52095_404	chr15	-	1863	8	FSM	ENSMUSG00000018169.13	ENSMUST00000018313.6	1865	8	2	0	2	0	multi-exon	FALSE	canonical	3	144	junction_5	11.4749060731561	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	-4	True	ATTAAA	-17	NA	78657673	78640081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
Isoform_52097_15	chr15	-	3322	7	NIC	ENSMUSG00000018169.13	novel	1865	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	144	junction_4	12.3017613914973	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	-4	True	ATTAAA	-17	NA	78657685	78640081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_78640845_78641496_78641583_78643392_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
Isoform_52099_5	chr15	-	1891	8	FSM	ENSMUSG00000033055.13	ENSMUST00000153003.3	1034	8	-48	-809	1	3	multi-exon	FALSE	canonical	1	2	junction_6	39.0143877176048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTTGTTGTTTTTTGT	NA	False	NA	-7	True	NA	NA	NA	78947084	78937300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942249_78945363_78945412_78946672
Isoform_52100_193	chr15	-	1895	8	FSM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	1	8	1	2	multi-exon	FALSE	canonical	3	102	junction_6	6.03391773769796	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTGTTGTTTTTTG	NA	False	NA	-8	True	NA	NA	NA	78947084	78937301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
Isoform_52102_3	chr15	-	1969	7	NIC	ENSMUSG00000033055.13	novel	1034	8	NA	NA	1	3	intron_retention	FALSE	canonical	1	2	junction_5	41.6763322122601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTTGTTGTTTTTTGT	NA	False	NA	-7	True	NA	NA	NA	78947084	78937300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_78938285_78938695_78938804_78939491_78939743_78940213_78940286_78942154_78942249_78945363_78945412_78946672
Isoform_52103_21	chr15	-	1975	7	NIC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	102	junction_5	6.51707159867238	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTTGTTGTTTTTTGT	NA	False	NA	-7	True	NA	NA	NA	78947085	78937300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_78938285_78938695_78938804_78939491_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
Isoform_52104_3	chr15	-	2387	6	FSM	ENSMUSG00000033055.13	ENSMUST00000229322.2	714	6	-262	-1411	1	-5	multi-exon	FALSE	canonical	3	102	junction_4	6.88767014308903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTGTTGTTTTTTGTGT	NA	False	NA	-5	True	NA	NA	NA	78947084	78937298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78938804_78939491_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
Isoform_52105_4	chr15	-	1160	6	ISM	ENSMUSG00000018126.16	ENSMUST00000169462.8	2276	13	23933	-6	-212	5	3prime_fragment	FALSE	canonical	1	1	junction_1	0.489897948556636	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGAGCCTGATTTGGG	NA	False	NA	NA	False	NA	NA	NA	79145709	79142389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_79142853_79143003_79143048_79143387_79143596_79143851_79143975_79145273_79145488_79145601
Isoform_5211_37	chr10	-	2516	8	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-2	1	intron_retention	FALSE	canonical	3	20	junction_7	395.995464826638	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAATCTCTTTCATATT	8245	False	NA	-15	True	ATTAAA	-21	NA	128540902	128533806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540479
Isoform_52110_140	chr15	-	3543	17	FSM	ENSMUSG00000042632.18	ENSMUST00000174021.8	3318	17	-226	1	13	-1	multi-exon	FALSE	canonical	3	78	junction_16	39.721638860324	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212390	79170428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
Isoform_52113_20	chr15	-	3160	18	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	55.3629733985577	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212381	79170428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212288
Isoform_52114_13	chr15	-	3088	18	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_17	53.5349706228067	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212430	79170428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212409
Isoform_52115_107	chr15	-	3106	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	53.1124617556935	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212407	79170428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
Isoform_52116_156	chr15	-	3031	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	79	junction_16	39.5790348543266	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212453	79170428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
Isoform_52120_37	chr15	-	3373	16	FSM	ENSMUSG00000042632.18	ENSMUST00000166977.9	3365	16	-9	1	-9	-1	multi-exon	FALSE	canonical	3	30	junction_8	51.9652020319581	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212385	79170428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
Isoform_52122_12	chr15	-	3021	17	FSM	ENSMUSG00000042632.18	ENSMUST00000173163.8	3018	17	-4	1	-4	-1	multi-exon	FALSE	canonical	0	0	junction_16	64.3206991857987	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212407	79170428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212288
Isoform_52124_39	chr15	-	2951	16	FSM	ENSMUSG00000042632.18	ENSMUST00000047816.15	2963	16	11	1	11	-1	multi-exon	FALSE	canonical	0	0	junction_15	63.160817671155	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212417	79170428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
Isoform_52126_59	chr15	-	2866	16	NIC	ENSMUSG00000042632.18	novel	2943	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	51.8533830461748	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212453	79170428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
Isoform_52127_91	chr15	-	3359	10	FSM	ENSMUSG00000009035.16	ENSMUST00000228002.2	3315	10	-24	-20	-4	0	multi-exon	FALSE	canonical	3	23	junction_1	128.214615603374	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287480	79244883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
Isoform_52133_1061	chr15	-	3358	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	269	0	-24	0	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287500	79244883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
Isoform_52135_36	chr15	-	4735	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	269	-1377	-24	1377	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCAGACTTATGT	NA	False	NA	NA	False	NA	NA	NA	79287500	79243506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
Isoform_52145_44	chr15	-	2786	11	FSM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	-88	-3	49	3	multi-exon	TRUE	canonical	3	59	junction_10	149.550794046705	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTGTCTGCCTCTTTG	8068	False	NA	-1	True	AATAAA	-27	NA	79326288	79302052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
Isoform_52147_82	chr15	-	2752	11	FSM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	-61	4	-58	-4	multi-exon	FALSE	canonical	3	59	junction_10	149.550794046705	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATACCCTCTGTCTGC	8095	False	NA	-8	True	AATAAA	-20	NA	79326261	79302059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
Isoform_52151_365	chr15	-	2756	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-58	-1306	-58	-4	multi-exon	FALSE	canonical	3	332	junction_10	81.5738315883225	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATACCCTCTGTCTGC	8095	False	NA	-8	True	AATAAA	-20	NA	79326261	79302059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
Isoform_52159_49	chr15	-	2647	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	20	-4	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	159.216487839671	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATACCCTCTGTCTGC	8039	False	NA	-8	True	AATAAA	-20	NA	79326317	79302059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326292
Isoform_52160_48	chr15	-	2690	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	15	2	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	155.61375260561	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTCTGTCTGCCTCTTT	8444	False	NA	-2	True	AATAAA	-26	NA	79339752	79302053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
Isoform_52170_11	chr15	-	2710	9	NIC	ENSMUSG00000022433.22	novel	3174	9	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	217.31684098339	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGCGTTTCTTAAG	8095	False	NA	0	True	AATAAA	-15	NA	79326261	79306680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
Isoform_52174_7	chr15	-	2747	2	FSM	ENSMUSG00000044216.8	ENSMUST00000057801.8	2152	2	-598	3	-598	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAGGCTGGTAGAGAGA	6830	False	NA	NA	False	AATAAA	-16	NA	79390040	79367917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79370021_79389396
Isoform_52176_46	chr15	-	4547	13	FSM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	183	2	1	-2	multi-exon	FALSE	canonical	3	53	junction_1	13.6714930502203	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTGAATTTTTTATTA	NA	False	NA	-42	True	AATAAA	-13	NA	79430759	79411938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79414719_79415872_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
Isoform_5218_521	chr10	-	2288	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	-55	7	-27	0	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTAGAGTGAATCTCT	8220	False	NA	-23	True	ATTAAA	-13	NA	128540927	128533814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
Isoform_52183_90	chr15	-	4542	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	182	2	0	-2	multi-exon	FALSE	canonical	3	55	junction_12	13.0064086767511	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTGAATTTTTTATTA	NA	False	NA	-42	True	AATAAA	-13	NA	79430760	79411938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
Isoform_52189_21	chr15	-	2208	14	FSM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	9	2	0	-2	multi-exon	FALSE	canonical	3	26	junction_6	20.9451241307391	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGATTCTGCATT	NA	False	NA	NA	False	AGTAAA	-14	NA	79489300	79445699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79472951_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
Isoform_5219_699	chr10	-	2264	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	-30	6	-2	-1	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	8245	False	NA	-22	True	ATTAAA	-14	NA	128540902	128533813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
Isoform_52193_5	chr15	-	1934	12	FSM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	0	-3	0	3	multi-exon	FALSE	canonical	3	19	junction_5	21.834085113127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATAAGACTATTTAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	79489300	79445808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
Isoform_52194_7	chr15	-	1157	12	FSM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	0	774	0	-2	multi-exon	FALSE	canonical	3	19	junction_5	21.834085113127	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGATGTGAAGCTTATA	NA	False	NA	-6	True	ATTAAA	-13	NA	79489300	79446585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
Isoform_52195_4	chr15	-	812	7	NIC	ENSMUSG00000022429.12	novel	1931	12	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	30.9066695427091	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGATGTGAAGCTTATA	NA	False	NA	-6	True	ATTAAA	-13	NA	79489300	79446585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79446784_79452839_79452957_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
Isoform_52196_4	chr15	-	806	4	ISM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	0	38043	0	-37271	5prime_fragment	FALSE	canonical	3	81	junction_3	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACCTTTATACTACTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	79489300	79483854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_79484394_79485717_79485763_79486601_79486686_79489162
Isoform_52198_566	chr15	-	3382	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	57	1	57	-1	multi-exon	FALSE	canonical	3	116	junction_1	10.9848380355227	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAGTCTACTTGTCTGA	NA	False	NA	-4	True	ATTAAA	-14	NA	79572063	79558452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
Isoform_52199_189	chr15	-	3419	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	20	1	20	-1	multi-exon	FALSE	canonical	3	116	junction_1	10.9848380355227	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAGTCTACTTGTCTGA	NA	False	NA	-4	True	ATTAAA	-14	NA	79572100	79558452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
Isoform_52210_12	chr15	-	3812	18	FSM	ENSMUSG00000042524.15	ENSMUST00000100439.10	3768	18	-43	-1	-11	0	multi-exon	TRUE	canonical	0	0	junction_6	1.19108569007745	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTGTGCTTTTTTCTG	NA	False	NA	0	True	AATAAA	-16	NA	79626748	79608270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79609762_79610742_79610836_79610991_79611160_79611251_79611368_79611716_79611802_79612063_79612286_79612616_79612783_79613233_79613278_79613681_79613760_79614290_79614546_79618308_79618437_79620046_79620121_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
Isoform_52212_29	chr15	-	3821	18	FSM	ENSMUSG00000042524.15	ENSMUST00000046259.14	3804	18	-14	-3	-14	0	multi-exon	FALSE	canonical	0	0	junction_6	1.14366012324845	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTGTGCTTTTTTCTG	NA	False	NA	0	True	AATAAA	-16	NA	79626751	79608270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79609762_79610742_79610836_79610991_79611160_79611251_79611368_79611716_79611802_79612063_79612286_79612616_79612783_79613233_79613278_79613681_79613760_79614290_79614546_79618308_79618437_79620046_79620127_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
Isoform_52213_4	chr15	-	2211	8	ISM	ENSMUSG00000042524.15	ENSMUST00000159762.8	1783	9	-63	3398	-31	1097	5prime_fragment	FALSE	canonical	0	0	junction_2	1.35526185435788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	79626768	79617211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_79618437_79620046_79620121_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
Isoform_52214_4	chr15	-	2194	8	ISM	ENSMUSG00000042524.15	ENSMUST00000046259.14	3804	18	-8	8938	-8	1097	5prime_fragment	FALSE	canonical	0	0	junction_3	1.27775312999988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	79626745	79617211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_79618437_79620046_79620127_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
Isoform_52215_76	chr15	-	1490	5	ISM	ENSMUSG00000022420.17	ENSMUST00000162713.9	1357	7	2545	-675	-11	-9	3prime_fragment	FALSE	canonical	3	63	junction_3	39.8591269347436	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAAACTTAGTCTGTG	283	False	NA	NA	False	ATTAAA	-8	NA	79658628	79645662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_79646727_79647710_79647795_79649016_79649223_79649987_79650055_79658559
Isoform_52217_84	chr15	-	1423	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	40	9	-11	-9	multi-exon	FALSE	canonical	3	65	junction_3	38.6091526281874	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAAACTTAGTCTGTG	283	False	NA	NA	False	ATTAAA	-8	NA	79658628	79645662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
Isoform_52219_54	chr15	-	4941	6	NNC	ENSMUSG00000022421.21	novel	5006	5	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.0066648158429	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTCTTCTGTCATATG	NA	False	NA	-1	True	AATAAA	-17	NA	79688924	79670551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_79672988_79673009_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79688175
Isoform_52222_14	chr15	-	4486	8	FSM	ENSMUSG00000089837.10	ENSMUST00000023060.13	1162	8	0	-3324	0	3324	multi-exon	FALSE	canonical	2	3	junction_4	65.4759653675784	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTCTTCTGTCATATG	NA	False	NA	-1	True	AATAAA	-17	NA	79718438	79670551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_52225_198	chr15	-	3107	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	454	2245	3	0	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718435	79710341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_52228_60	chr15	-	3172	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	390	2244	-18	1	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718499	79710340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_52230_5	chr15	-	3262	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	300	2244	-63	1	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718589	79710340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_52232_14	chr15	-	5353	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	451	2	0	-2	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCAGCCCCCTGGATGG	NA	False	NA	-6	True	AATAAA	-20	NA	79718438	79708098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_52237_70	chr15	-	2984	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	-79	-6	37	6	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816932	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_52238_45	chr15	-	3018	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	-119	0	-3	0	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816972	79800007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_52239_81	chr15	-	2882	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	23	-6	10	6	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816830	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_52244_185	chr15	-	2960	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	121.853737461488	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855329	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
Isoform_52257_63	chr15	-	3021	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	37	6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	153.192326468687	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816932	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_52261_95	chr15	-	2997	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-9	6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	148.84294481843	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855329	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
Isoform_5227_8	chr10	-	909	4	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	22541	3	9513	-1	3prime_fragment	FALSE	canonical	3	88	junction_2	12.5521135891752	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTCCCGCAAGGTTC	8830	False	NA	-13	True	AATAAA	-13	NA	128557403	128556005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046
Isoform_52270_80	chr15	-	3233	6	FSM	ENSMUSG00000053411.17	ENSMUST00000109615.8	710	6	-214	-2309	14	6	multi-exon	FALSE	canonical	3	216	junction_5	106.136892737634	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816955	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_52271_302	chr15	-	3208	6	FSM	ENSMUSG00000053411.17	ENSMUST00000109615.8	710	6	-189	-2309	39	6	multi-exon	FALSE	canonical	3	216	junction_5	106.136892737634	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816930	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_52274_23	chr15	-	3023	6	FSM	ENSMUSG00000053411.17	ENSMUST00000146719.9	714	6	38	-2347	-31	6	multi-exon	FALSE	canonical	3	28	junction_5	171.122646075848	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79818062	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79817965
Isoform_52275_387	chr15	-	3174	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	2	-2648	2	6	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855317	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
Isoform_52279_39	chr15	-	3137	5	NIC	ENSMUSG00000053411.17	novel	528	6	NA	NA	-4	6	intron_retention	FALSE	canonical	3	17	junction_4	180.403021039006	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855324	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79855069
Isoform_52287_23	chr15	-	3459	6	NIC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	-9	0	intron_retention	FALSE	canonical	3	31	junction_2	172.968205170777	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855329	79800007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79855069
Isoform_52290_21	chr15	-	5708	6	NNC	ENSMUSG00000053411.17	novel	663	6	NA	NA	-8	6	intron_retention	FALSE	non_canonical	0	0	junction_2	183.960213089679	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855328	79800001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_79802678_79802953_79805107_79805129_79805640_79807672_79807739_79814786_79814831_79855069
Isoform_52293_5	chr15	-	2193	7	NIC	ENSMUSG00000000489.8	novel	2944	7	NA	NA	-23	-15	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	5.6494837522261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCACAAAACAAAACCACG	NA	False	NA	NA	False	TTTAAA	-17	NA	79897427	79880089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79897290
Isoform_52294_5	chr15	-	2443	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	485	16	485	-16	multi-exon	FALSE	canonical	2	5	junction_6	4.63381292481928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCCACAAAACAAAACCAC	NA	False	NA	NA	False	TTTAAA	-16	NA	79898524	79880090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
Isoform_52295_8	chr15	-	2133	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	796	15	796	-15	multi-exon	FALSE	canonical	2	5	junction_6	4.63381292481928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCACAAAACAAAACCACG	NA	False	NA	NA	False	TTTAAA	-17	NA	79898213	79880089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
Isoform_52296_3	chr15	-	2735	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	194	15	194	-15	multi-exon	FALSE	canonical	2	5	junction_6	4.63381292481928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCACAAAACAAAACCACG	NA	False	NA	NA	False	TTTAAA	-17	NA	79898815	79880089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
Isoform_52297_7	chr15	-	2297	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	656	-9	656	9	multi-exon	TRUE	canonical	2	5	junction_6	4.63381292481928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTTGGCATCGGGT	NA	False	NA	NA	False	AAAAAG	-23	NA	79898353	79880065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
Isoform_52298_10	chr15	-	2159	7	NNC	ENSMUSG00000000489.8	novel	2944	7	NA	NA	237	-15	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	4.63381292481928	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCACAAAACAAAACCACG	NA	False	NA	NA	False	TTTAAA	-17	NA	79897167	79880089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79897064
Isoform_52299_4	chr15	-	2144	7	NNC	ENSMUSG00000000489.8	novel	2944	7	NA	NA	248	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.23609564462324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCACAAAACAAAACCACG	NA	False	NA	NA	False	TTTAAA	-17	NA	79897156	79880089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889673_79889767_79897064
Isoform_5230_31	chr10	-	2866	24	FSM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	-28	-4	-28	4	multi-exon	FALSE	canonical	3	46	junction_14	14.5196561901106	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGCAAGGTTCTGAGAAT	9963	False	NA	-6	True	AATAAA	-20	NA	128579972	128555998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
Isoform_52309_4876	chr15	-	1292	10	FSM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	54	5	1	-1	multi-exon	FALSE	canonical	3	16287	junction_9	4874.04926341766	4876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
Isoform_52315_258	chr15	-	1472	10	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	214	junction_7	9920.80080773053	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
Isoform_52317_188	chr15	-	1875	9	FSM	ENSMUSG00000060036.15	ENSMUST00000187578.2	1877	9	1	1	1	-1	multi-exon	FALSE	canonical	3	16287	junction_8	5123.08483118326	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
Isoform_52321_66	chr15	-	2390	8	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_7	5307.90272968101	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965985_79966590_79966784_79967524
Isoform_5233_6	chr10	-	2591	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	6510	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_23	18.9833276766388	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTCCCGCAAGGTTC	5053	False	NA	-13	True	AATAAA	-13	NA	128573434	128556005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128573394
Isoform_5234_7	chr10	-	2632	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-6474	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_23	19.5399837278125	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGCAAGGTTCTGAGAATT	5097	False	NA	-5	True	AATAAA	-21	NA	128573390	128555997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128573317
Isoform_52349_194	chr15	-	820	4	FSM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	12	6	12	-6	multi-exon	FALSE	canonical	3	697	junction_3	66.5181679443043	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGATTCAAGTGTGTG	NA	False	NA	-11	True	AATAAA	-19	NA	80148504	80144821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_80145332_80145497_80145596_80148183_80148319_80148427
Isoform_5235_7	chr10	-	2593	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	6491	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_23	19.5399837278125	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCCCTCCCGCAAG	5034	False	NA	-17	True	AATAAA	-9	NA	128573453	128556009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128573407
Isoform_52353_10	chr15	-	970	3	NIC	ENSMUSG00000051518.9	novel	838	4	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	697	junction_2	77.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGATTCAAGTGTGTG	NA	False	NA	-11	True	AATAAA	-19	NA	80148488	80144821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_80145596_80148183_80148319_80148427
Isoform_52355_121	chr15	-	4337	14	FSM	ENSMUSG00000042292.19	ENSMUST00000239114.2	4366	14	22	7	-2	3	multi-exon	FALSE	canonical	3	46	junction_4	7.74138192332869	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCAGTCTGTTGTATTT	NA	False	NA	-10	True	AATAAA	-14	NA	81074936	80896488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81074707
Isoform_52356_5	chr15	-	2135	4	FSM	ENSMUSG00000042292.19	ENSMUST00000123243.8	849	4	-28	-1258	1	1258	multi-exon	FALSE	canonical	3	50	junction_1	7.40870359029762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81074957	80909361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_80910919_80929489_80929556_81001591_81001854_81074707
Isoform_52358_288	chr15	-	1686	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	31	7	-4	-7	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTCATGAAAGTTGCT	6879	False	NA	-17	True	AATAAA	-20	NA	81244982	81203118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
Isoform_5236_6	chr10	-	2659	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-6368	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_23	19.3991015713857	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGCAAGGTTCTGAGAA	5203	False	NA	-7	True	AATAAA	-19	NA	128573284	128555999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128573182
Isoform_52368_7	chr15	-	3360	8	NIC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	10	-2	intron_retention	FALSE	canonical	3	302	junction_5	17.6149287334838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGAAAGTTGCTCTTGA	6897	False	NA	-12	True	AATAAA	-25	NA	81244964	81203113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
Isoform_5237_24	chr10	-	2430	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	-95	0	-95	0	multi-exon	FALSE	canonical	3	13	junction_4	8.20060973342836	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	5642	False	NA	-7	True	AATAAA	-18	NA	128640334	128635904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
Isoform_5238_19	chr10	-	2908	5	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-1000	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	11.3880419739304	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4737	False	NA	-7	True	AATAAA	-18	NA	128641239	128635904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640528
Isoform_5239_3	chr10	-	4647	3	FSM	ENSMUSG00000047090.14	ENSMUST00000152966.2	3156	3	-1422	-69	-1013	0	multi-exon	FALSE	canonical	3	22	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4724	False	NA	-7	True	AATAAA	-18	NA	128641252	128635904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128637099_128637219_128638387_128638966
Isoform_52390_1317	chr15	-	2972	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	373	1	-76	-1	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGACCTTCCCCCATT	NA	False	NA	-20	True	AATAAA	-17	NA	81283871	81247870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
Isoform_52391_463	chr15	-	3019	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	327	0	-122	0	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81283917	81247869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
Isoform_5240_9	chr10	-	2025	3	ISM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	-8	15	-8	-15	intron_retention	FALSE	canonical	3	748	junction_2	69	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGACAGAGAGATTTTC	NA	False	NA	-8	True	AATAAA	-30	NA	128657483	128654365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_128654885_128655822_128655975_128656129
Isoform_52401_475	chr15	-	1665	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	306	1375	-143	406	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283938	81249244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
Isoform_52425_8	chr15	-	2190	4	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	2131	37	379	-21	3prime_fragment	FALSE	canonical	3	19	junction_3	7.87400787401181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAACAAAAA	7126	False	NA	NA	False	NA	NA	NA	81579357	81570402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_81570604_81576308_81576508_81577187_81577355_81577734
Isoform_52426_4	chr15	-	1075	3	FSM	ENSMUSG00000063765.13	ENSMUST00000173898.2	1095	3	-1	21	-1	-21	multi-exon	FALSE	canonical	3	12	junction_2	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAACAAAAA	8074	False	NA	NA	False	NA	NA	NA	81578409	81570402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81570604_81576308_81576508_81577734
Isoform_52427_6	chr15	-	2303	3	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	3054	4706	-26	3253	internal_fragment	FALSE	canonical	3	19	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGCCTCTTTCAGTGT	8049	False	NA	NA	False	AATAAA	-45	NA	81578434	81575071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_81576508_81577187_81577355_81577734
Isoform_52428_3	chr15	-	3201	3	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	2130	4732	378	3227	internal_fragment	FALSE	canonical	3	19	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCCGGTGGCCTGTGCC	7125	False	NA	NA	False	AATAAA	-19	NA	81579358	81575097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_81576508_81577187_81577355_81577734
Isoform_5243_8	chr10	-	2103	3	ISM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	-7	-64	-7	64	intron_retention	FALSE	canonical	3	748	junction_2	69	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTCTCTACTCCTT	NA	False	NA	-1	True	TATAAA	-16	NA	128657482	128654286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_128654885_128655822_128655975_128656129
Isoform_5245_138	chr10	-	922	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	31	-229	-8	-12	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGAGAGATTTTCTCA	NA	False	NA	-5	True	AATAAA	-33	NA	128657483	128654362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
Isoform_52457_2962	chr15	-	2900	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	133	0	-8	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	2962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614071	81588453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
Isoform_5246_90	chr10	-	998	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	31	-305	-8	64	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTCTCTACTCCTT	NA	False	NA	-1	True	TATAAA	-16	NA	128657483	128654286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
Isoform_52462_75	chr15	-	2959	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	74	0	-28	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614130	81588453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
Isoform_5248_248	chr10	-	1001	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-20	592	-8	-12	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGAGAGATTTTCTCA	NA	False	NA	-5	True	AATAAA	-33	NA	128657483	128654362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
Isoform_52485_63	chr15	-	3983	2	FSM	ENSMUSG00000048546.9	ENSMUST00000050467.9	4151	2	168	0	6	0	multi-exon	FALSE	canonical	3	45	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTGCCTACTTGTTTG	NA	False	NA	-8	True	ATTAAA	-17	NA	81742518	81732472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81736074_81742136
Isoform_5249_143	chr10	-	1077	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-20	516	-8	64	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTCTCTACTCCTT	NA	False	NA	-1	True	TATAAA	-16	NA	128657483	128654286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
Isoform_52495_838	chr15	-	864	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	1	798	1	151	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAACGTCTACTTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	81756111	81749518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
Isoform_52496_10	chr15	-	890	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	-25	798	-25	151	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAACGTCTACTTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	81756137	81749518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
Isoform_52500_9	chr15	-	2020	6	FSM	ENSMUSG00000022476.9	ENSMUST00000230765.2	1290	6	-241	-489	28	320	multi-exon	FALSE	canonical	1	4	junction_5	105.973581613532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCCCCTTTTCATTAGC	456	False	NA	0	True	AATAAA	-19	NA	81810413	81800281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809428
Isoform_52501_329	chr15	-	1460	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	28	1054	28	318	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTCCCCTTTTCATTA	456	False	NA	-2	True	AATAAA	-17	NA	81810413	81800283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
Isoform_52503_18	chr15	-	2556	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	27	-41	27	41	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAACCAAACTGAACA	455	False	NA	NA	False	AATAAA	-22	NA	81810414	81799188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
Isoform_5251_8	chr10	-	1611	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-31	-7	-19	7	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTCCACTCTTGAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	128657494	128653763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
Isoform_52513_2172	chr15	-	1229	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	70	1	-2	-1	multi-exon	FALSE	canonical	3	940	junction_3	83.919543587405	2172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTGGTGTTTGCTCTGT	NA	False	NA	-4	True	ATTAAA	-13	NA	81845061	81835309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
Isoform_52517_33	chr15	-	4076	7	NIC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	1009	junction_2	63.2308381162933	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTGGTGTTTGCTCTGT	NA	False	NA	-4	True	ATTAAA	-13	NA	81845060	81835309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_81835814_81836124_81836241_81836925_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
Isoform_52523_60	chr15	-	639	5	FSM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	-27	0	-2	0	multi-exon	FALSE	canonical	3	1051	junction_1	37.9300342736465	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTACTGTGTGTCATTTC	NA	False	NA	-4	True	NA	NA	NA	81845061	81839743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
Isoform_52525_171	chr15	-	2934	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81900364	81876723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
Isoform_52529_4	chr15	-	3047	6	NIC	ENSMUSG00000022472.17	novel	2934	6	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	70.4198835557117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81900410	81876723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_81879047_81882310_81882501_81883705_81883816_81886741_81886812_81887958_81887981_81900078
Isoform_52531_1487	chr15	-	1247	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	11	819	-8	134	multi-exon	FALSE	canonical	3	3045	junction_2	110	1487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAATATGGCAGCTGTG	4917	False	NA	-26	True	AATAAA	-21	NA	81931788	81925544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81926570_81928097_81928219_81931687
Isoform_52538_247	chr15	-	1830	4	FSM	ENSMUSG00000096883.3	ENSMUST00000179269.3	2588	4	-27	785	-27	241	multi-exon	FALSE	canonical	3	79	junction_3	2.62466929133727	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATCGATCATCAGTCA	NA	False	NA	-5	True	AATAAA	-25	NA	82097043	82091153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82091749_82091951_82092099_82092663_82092798_82096089
Isoform_5254_11	chr10	-	745	3	FSM	ENSMUSG00000025353.6	ENSMUST00000217685.2	666	3	-23	-56	-8	-14	multi-exon	FALSE	canonical	3	26	junction_2	430	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACAGAGAGATTTTCT	NA	False	NA	-7	True	AATAAA	-31	NA	128657483	128654364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128654885_128655822_128655975_128657410
Isoform_52542_10	chr15	-	2030	3	NIC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-27	238	intron_retention	FALSE	canonical	3	79	junction_2	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGGATCGATCATCAG	NA	False	NA	-8	True	AATAAA	-22	NA	82097043	82091156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_82092099_82092663_82092798_82096089
Isoform_52543_10	chr15	-	1934	3	FSM	ENSMUSG00000068105.12	ENSMUST00000089161.10	1924	3	-14	4	2	-2	multi-exon	FALSE	canonical	3	7	junction_1	3	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTCTGTGCCTGGGTGC	NA	False	NA	NA	False	AATAAA	-21	NA	82108568	82105947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82107478_82107919_82108124_82108368
Isoform_52544_133	chr15	-	974	5	FSM	ENSMUSG00000068101.12	ENSMUST00000230408.2	593	5	1	-382	1	1	multi-exon	FALSE	canonical	3	1067	junction_2	109.17045158833	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTGTAGATGCAGAA	NA	False	NA	-16	True	AAAAAG	-15	NA	82128610	82118278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333
Isoform_52545_18	chr15	-	1286	5	FSM	ENSMUSG00000068101.12	ENSMUST00000230408.2	593	5	-11	-682	-11	1	multi-exon	FALSE	canonical	3	1067	junction_2	109.17045158833	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	82128622	82117978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333
Isoform_52546_23	chr15	-	881	6	NIC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	488.753271088798	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTGTAGATGCAGAA	NA	False	NA	-16	True	AAAAAG	-15	NA	82128609	82118278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128505
Isoform_52549_38	chr15	-	1191	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	12	-1	-9	1	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	82128937	82117978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
Isoform_5255_7	chr10	-	823	3	FSM	ENSMUSG00000025353.6	ENSMUST00000217685.2	666	3	-23	-134	-8	64	multi-exon	FALSE	canonical	3	26	junction_2	430	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTCTCTACTCCTT	NA	False	NA	-1	True	TATAAA	-16	NA	128657483	128654286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128654885_128655822_128655975_128657410
Isoform_52558_16	chr15	-	1863	10	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-9	-14	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	84.6325390536445	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTTCTAATCAACCAG	1354	False	NA	-14	True	AATAAA	-17	NA	82223017	82213746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221698_82222438_82222516_82222952
Isoform_52561_11	chr15	-	2793	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	10	-890	-9	890	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTCTCAATAGTAGCT	1354	False	NA	NA	False	NA	NA	NA	82223017	82212842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
Isoform_52563_446	chr15	-	1884	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	13	16	-6	-16	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTTTTCTAATCAACC	1357	False	NA	-16	True	AATAAA	-15	NA	82223014	82213748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
Isoform_52564_51	chr15	-	1989	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	-91	15	8	-15	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1253	False	NA	-15	True	AATAAA	-16	NA	82223118	82213747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
Isoform_52567_33	chr15	-	1851	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	24	-15	combination_of_known_splicesites	FALSE	canonical	2	29	junction_8	84.7758072801433	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1314	False	NA	-15	True	AATAAA	-16	NA	82223057	82213747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222952
Isoform_5257_21	chr10	-	725	3	ISM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	474	-1	-24	1	3prime_fragment	FALSE	canonical	3	559	junction_1	44.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGTTTGAAGGAGT	NA	False	NA	0	True	AATAAA	-20	NA	128758919	128755781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_128755977_128756427_128756561_128758522
Isoform_52571_50	chr15	-	1716	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-9	-15	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	86.2554346113913	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1354	False	NA	-15	True	AATAAA	-16	NA	82223017	82213747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222438_82222516_82222952
Isoform_52574_10	chr15	-	1650	8	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	-14	combination_of_known_splicesites	FALSE	canonical	2	27	junction_6	115.458624093443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTTCTAATCAACCAG	1344	False	NA	-14	True	AATAAA	-17	NA	82223027	82213746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222952
Isoform_52575_11	chr15	-	2084	9	NNC	ENSMUSG00000022453.9	novel	1020	7	NA	NA	-10	-589	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	95.9882805346569	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACGCTAGAAGGCCCT	1334	False	NA	NA	False	NA	NA	NA	82223037	82215523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_82216123_82216151_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
Isoform_5258_295	chr10	-	525	4	FSM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	26	-1	26	1	multi-exon	FALSE	canonical	3	559	junction_1	37.4788829431544	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGTTTGAAGGAGT	NA	False	NA	0	True	AATAAA	-20	NA	128759367	128755781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_128755977_128756427_128756561_128758522_128758596_128759243
Isoform_52583_1549	chr15	-	474	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	85	31	0	-1	multi-exon	FALSE	canonical	3	3916	junction_1	175	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGATAAAATTGCACTG	6297	False	NA	-44	True	AATAAA	-19	NA	82238438	82234371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82234573_82235179_82235296_82238281
Isoform_52584_118	chr15	-	528	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	31	31	31	-1	multi-exon	FALSE	canonical	3	3916	junction_1	175	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGATAAAATTGCACTG	6243	False	NA	-44	True	AATAAA	-19	NA	82238492	82234371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_82234573_82235179_82235296_82238281
Isoform_526_1010	SIRV1	-	669	5	FSM	SIRV1A	SIRV105	670	5	1	0	1	0	multi-exon	FALSE	canonical	3	1547	junction_4	2187.81237769604	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10639	6449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
Isoform_52603_11	chr15	-	7547	5	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	18	-13	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	45.3727616527802	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTTTTCATTTACT	9186	False	NA	-18	True	AATAAA	-15	NA	82783994	82692649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82783702
Isoform_52604_16	chr15	-	6883	5	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	18	-487	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	45.3727616527802	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACACTATTTATTTATTT	9186	False	NA	-9	True	AATAAA	-15	NA	82783994	82693313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82783702
Isoform_52606_4	chr15	-	1782	4	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	13	-11	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	61.3568795382121	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	9181	False	NA	-16	True	AATAAA	-17	NA	82783999	82692647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82783702
Isoform_5261_89	chr10	-	662	3	Intergenic	novelGene_759	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	118	junction_1	2.5	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGGTGTCAGTGGCTC	NA	False	NA	-24	True	AGTAAA	-13	NA	21934512	21930760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_21931017_21933427_21933570_21934248
Isoform_52614_1903	chr15	-	1871	8	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	832	junction_4	68.5907710814729	1903	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006951	83000048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83000330_83000355_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
Isoform_52615_148	chr15	-	1895	8	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	832	junction_4	68.5907710814729	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006975	83000048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83000330_83000355_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
Isoform_52630_2528	chr15	-	3204	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.638995176448	2528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGCTATAATGTCTT	NA	False	NA	-12	True	AATAAA	-16	NA	83033530	83010177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83011513_83011551_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
Isoform_52632_254	chr15	-	3278	9	FSM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	20	1	20	-1	multi-exon	FALSE	canonical	3	462	junction_6	74.2839779158332	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGCTATAATGTCTT	NA	False	NA	-12	True	AATAAA	-16	NA	83033565	83010177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
Isoform_52635_406	chr15	-	3110	9	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	7	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	258.479901297954	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGCTATAATGTCTT	NA	False	NA	-12	True	AATAAA	-16	NA	83033523	83010177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83011513_83011551_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
Isoform_52647_1373	chr15	-	2011	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	410	1	410	-1	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCAGCGTTTCTCTGG	NA	False	NA	-1	True	AGTAAA	-17	NA	83056383	83037695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
Isoform_52648_425	chr15	-	2046	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	375	1	375	-1	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCAGCGTTTCTCTGG	NA	False	NA	-1	True	AGTAAA	-17	NA	83056418	83037695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
Isoform_52659_75	chr15	-	2128	3	FSM	ENSMUSG00000047878.14	ENSMUST00000164614.3	1974	3	4	-158	2	0	multi-exon	FALSE	canonical	3	30	junction_2	34	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2270	False	NA	-8	True	AATAAA	-16	NA	83135928	83110922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83112796_83114714_83114859_83135817
Isoform_5266_6	chr10	-	1924	7	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	4	1	intron_retention	FALSE	canonical	3	29	junction_1	68.5727513099935	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198125	115176645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_115177245_115178378_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
Isoform_52660_105	chr15	-	2045	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	47	0	2	0	multi-exon	FALSE	canonical	3	57	junction_2	20.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2270	False	NA	-8	True	AATAAA	-16	NA	83135928	83110922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83112796_83114714_83114859_83135900
Isoform_52661_78	chr15	-	2128	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	-36	0	-36	0	multi-exon	FALSE	canonical	3	57	junction_2	20.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2187	False	NA	-8	True	AATAAA	-16	NA	83136011	83110922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83112796_83114714_83114859_83135900
Isoform_52662_9	chr15	-	2127	3	NNC	ENSMUSG00000047878.14	novel	2092	3	NA	NA	13701	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	45.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCCTCATGGTCACAT	5772	False	NA	-7	True	AATAAA	-17	NA	83122229	83110921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83112796_83114714_83114859_83122120
Isoform_52664_3	chr15	-	1989	2	FSM	ENSMUSG00000047878.14	ENSMUST00000229687.2	375	2	-1	-1613	-1	2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCTCATGGTCACATC	2267	False	NA	-6	True	AATAAA	-18	NA	83135931	83110920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83112796_83135817
Isoform_52665_7	chr15	-	1897	2	NIC	ENSMUSG00000047878.14	novel	2092	3	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTAATGCCTCATGGT	2270	False	NA	-12	True	AATAAA	-12	NA	83135928	83110926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83112796_83135900
Isoform_52668_4	chr15	-	4047	2	NIC	ENSMUSG00000047878.14	novel	2092	3	NA	NA	-38	-2	intron_retention	FALSE	canonical	3	57	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATGCCTCATGGTCA	2185	False	NA	-10	True	AATAAA	-14	NA	83136013	83110924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83114859_83135900
Isoform_52669_4	chr15	-	1082	3	FSM	ENSMUSG00000054277.9	ENSMUST00000226816.2	1186	3	21	83	21	-2	multi-exon	FALSE	canonical	2	5	junction_2	31.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGATTTCAGATGA	NA	False	NA	-110	True	AGTAAA	-24	NA	83189521	83184023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83184904_83187303_83187426_83189441
Isoform_5267_37	chr10	-	1852	8	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	63.4967458590901	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198145	115176645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_115177245_115178378_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
Isoform_52670_5	chr15	-	2516	16	FSM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	-60	5	13	-5	multi-exon	FALSE	canonical	3	13	junction_5	14.6272196796095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAAATGTGATTTCAGA	3538	False	NA	-113	True	AGTAAA	-21	NA	83234435	83184026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_52671_3	chr15	-	2614	16	FSM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	-71	-82	2	0	multi-exon	TRUE	canonical	3	13	junction_5	14.6272196796095	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	3527	False	NA	-26	True	AATATA	-16	NA	83234446	83183939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_52672_5	chr15	-	2485	16	NNC	ENSMUSG00000054277.9	novel	2461	16	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	13.8381116245438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGATTTCAGATGAC	3576	False	NA	-109	True	AGTAAA	-25	NA	83234397	83184022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_52676_25	chr15	-	2600	16	FSM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	19	0	19	0	multi-exon	FALSE	canonical	3	20	junction_9	11.3927852413515	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	3544	False	NA	-26	True	AATATA	-16	NA	83234429	83183939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_52677_37	chr15	-	2519	16	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	10.2515039547051	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGATTTCAGATGAC	3545	False	NA	-109	True	AGTAAA	-25	NA	83234428	83184022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_52678_26	chr15	-	2601	16	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	10.2515039547051	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGGTTGCCTGTGTTGTC	3545	False	NA	-27	True	AATATA	-15	NA	83234428	83183940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_52679_4	chr15	-	2899	14	ISM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	5	5771	5	-2935	5prime_fragment	FALSE	canonical	3	20	junction_7	10.9787314558057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAACAAAAAGAAGAAGA	3530	False	NA	NA	False	AAAACA	-25	NA	83234443	83189710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_52680_6	chr15	-	2885	14	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	21	-2936	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	9.68375691191152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAACAAAAAGAAGAAG	3546	False	NA	NA	False	AAAACA	-24	NA	83234427	83189711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_52681_5	chr15	-	2296	4	FSM	ENSMUSG00000075511.10	ENSMUST00000100370.2	2270	4	-2	-24	-2	-2	multi-exon	FALSE	canonical	3	13	junction_3	6.97614984548545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTCCAGCTTAAGTCT	248	False	NA	NA	False	AATAAA	-18	NA	83251480	83241736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83243152_83248020_83248130_83249229_83249712_83251190
Isoform_52683_12	chr15	-	2298	4	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	20	junction_1	14.2672897060218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGTCCAGCTTAAGTC	248	False	NA	NA	False	AATAAA	-17	NA	83251480	83241737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83243152_83248020_83248130_83249229_83249715_83251190
Isoform_52685_7	chr15	-	6220	4	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-34	195	intron_retention	FALSE	canonical	3	20	junction_1	14.2672897060218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAACTGTTGTGAAGTA	211	False	NA	NA	False	AATAAA	-13	NA	83251517	83237852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83243152_83248020_83248130_83249229_83249715_83251190
Isoform_52686_11	chr15	-	6185	4	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	2	196	intron_retention	FALSE	canonical	3	20	junction_1	14.2672897060218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTGTTGTGAAGTAA	247	False	NA	NA	False	AATAAA	-14	NA	83251481	83237851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83243152_83248020_83248130_83249229_83249715_83251190
Isoform_52687_9	chr15	-	2181	3	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	4	-2	intron_retention	FALSE	canonical	3	13	junction_2	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTCCAGCTTAAGTCT	254	False	NA	NA	False	AATAAA	-18	NA	83251474	83241736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83243152_83249229_83249712_83251190
Isoform_52688_8	chr15	-	6074	3	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-2	198	intron_retention	FALSE	canonical	3	13	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTTGTGAAGTAAGC	248	False	NA	NA	False	AATAAA	-16	NA	83251480	83237849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83243152_83249229_83249712_83251190
Isoform_52691_6	chr15	-	2248	3	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-55	-2	intron_retention	FALSE	canonical	3	28	junction_1	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTCCAGCTTAAGTCT	190	False	NA	NA	False	AATAAA	-18	NA	83251538	83241736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83243152_83249229_83249715_83251190
Isoform_52693_20	chr15	-	6075	3	NIC	ENSMUSG00000075511.10	novel	4969	3	NA	NA	-2	196	intron_retention	FALSE	canonical	3	28	junction_1	13	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTGTTGTGAAGTAA	248	False	NA	NA	False	AATAAA	-14	NA	83251480	83237851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83243152_83249229_83249715_83251190
Isoform_52695_6	chr15	-	1707	2	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	2	-1	intron_retention	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCCAGCTTAAGTCTC	247	False	NA	NA	False	AATAAA	-19	NA	83251481	83241735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83243152_83251190
Isoform_5270_11	chr10	-	591	4	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-35	693	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	24.9131825880731	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109562	34106209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_34106388_34106902_34107071_34107314_34107400_34109402
Isoform_52708_227	chr15	-	3216	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	-37	7	-28	-3	multi-exon	FALSE	canonical	3	62	junction_10	172.10531659423	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTTTGCCTTGCATCCA	NA	False	NA	-3	True	AATAAA	-24	NA	83317053	83260325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
Isoform_5271_3	chr10	-	656	4	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-101	692	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	24.9131825880731	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCTCGGTCTCTTTC	NA	False	NA	-2	True	NA	NA	NA	34109628	34106210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_34106388_34106902_34107071_34107314_34107400_34109402
Isoform_52710_78	chr15	-	3128	11	FSM	ENSMUSG00000016664.17	ENSMUST00000231184.2	3103	11	-28	3	-28	-3	multi-exon	FALSE	canonical	3	32	junction_10	180.758512939225	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTTTGCCTTGCATCCA	NA	False	NA	-3	True	AATAAA	-24	NA	83317053	83260325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316952
Isoform_52711_51	chr15	-	3275	12	NIC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	37	junction_10	226.521303250812	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCCTTTGCCTTGCATC	7104	False	NA	-5	True	AATAAA	-22	NA	83348810	83260327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83337067_83337167_83348659
Isoform_52713_1449	chr15	-	3165	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	-1	529	-1	-14	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGACAGTCCCTTTG	7106	False	NA	-14	True	AATAAA	-13	NA	83348808	83260336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
Isoform_5272_16	chr10	-	506	3	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-35	693	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	27.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109562	34106209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_34106388_34106902_34107071_34109402
Isoform_52720_25	chr15	-	3040	10	NIC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	3	-2	intron_retention	FALSE	canonical	2	10	junction_9	194.819638019438	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGCCTTGCATCCAC	7110	False	NA	-2	True	AATAAA	-25	NA	83348804	83260324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83348659
Isoform_52722_151	chr15	-	2040	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	18	2	-1	-2	multi-exon	FALSE	canonical	3	63	junction_11	7.21110255092798	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTTTATCTTATTA	NA	False	NA	NA	False	NA	NA	NA	83395076	83367971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
Isoform_52724_17	chr15	-	2174	14	NNC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	-4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	1	1	junction_13	28.6157981773258	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTTTATCTTATTA	NA	False	NA	NA	False	NA	NA	NA	83395086	83367971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83368155_83368174_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83393853_83393998_83394934
Isoform_52726_891	chr15	-	1917	4	FSM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	-2	2	-2	-2	multi-exon	FALSE	canonical	3	138	junction_2	37.1423687391577	891	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGGCTCTCTCTCTCTG	8049	False	NA	-2	True	AATAAA	-21	NA	83439938	83430999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83432144_83433318_83433537_83436734_83436823_83439471
Isoform_52736_278	chr15	-	3267	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	-45	552	-45	-523	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTTTCTCTTTGGG	4626	False	NA	-1	True	AGTAAA	-17	NA	83479403	83459842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
Isoform_52737_667	chr15	-	3187	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	35	552	35	-523	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTTTCTCTTTGGG	4706	False	NA	-1	True	AGTAAA	-17	NA	83479323	83459842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
Isoform_52742_35	chr15	-	3731	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	41	2	41	-2	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTCAGGTACTTCACA	4712	False	NA	NA	False	AATATA	-17	NA	83479317	83459292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
Isoform_5275_13	chr10	-	1243	2	Intergenic	novelGene_723	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGTGGTCTCGCTGGTCCT	NA	False	NA	NA	False	NA	NA	NA	8422380	8419967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_8421034_8422203
Isoform_52750_3	chr15	-	3186	5	ISM	ENSMUSG00000016763.16	ENSMUST00000171496.9	2989	22	-119	49266	-24	1	5prime_fragment	FALSE	canonical	0	0	junction_3	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	83609246	83540789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_83543353_83561106_83561242_83587618_83587748_83606050_83606183_83609019
Isoform_52751_93	chr15	-	2384	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-17	-1048	-17	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989827	83960297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_52752_70	chr15	-	2408	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-41	-1048	-41	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989851	83960297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_52755_3	chr15	-	3692	7	NIC	ENSMUSG00000018865.10	novel	2383	7	NA	NA	-36	0	intron_retention	FALSE	canonical	3	63	junction_1	8.90068661521246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989846	83960297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83961784_83962969_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_52756_4	chr15	-	2617	8	NNC	ENSMUSG00000018865.10	novel	1319	8	NA	NA	-31	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	27.9533138483086	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAAGTGCATTTCCAGG	NA	False	NA	NA	False	AATAAA	-14	NA	83989841	83961347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_83961784_83962969_83963454_83963473_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_52758_15	chr15	-	2255	7	FSM	ENSMUSG00000018865.10	ENSMUST00000082365.6	2383	7	128	0	-17	0	multi-exon	FALSE	canonical	1	1	junction_1	29.8105126870818	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989827	83960297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_83961784_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_52759_4	chr15	-	4851	6	NIC	ENSMUSG00000018865.10	novel	2383	7	NA	NA	-9	0	intron_retention	FALSE	canonical	3	68	junction_1	7.23878442834154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989819	83960297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_5276_11	chr10	-	2863	11	NNC	ENSMUSG00000020130.10	novel	492	5	NA	NA	42	-6147	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	134.870493437223	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATATTCTAGTGGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	115087330	115050537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_115052204_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
Isoform_52760_4	chr15	-	3694	12	FSM	ENSMUSG00000016624.16	ENSMUST00000162044.8	2568	12	-378	-748	-80	-2	multi-exon	FALSE	canonical	1	4	junction_7	2.56163687338279	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCTCGGTGGTCCTGT	NA	False	NA	-9	True	ATTAAA	-8	NA	84740330	84669586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_84671651_84675265_84675370_84675554_84675631_84675983_84676143_84679280_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
Isoform_52766_6	chr15	-	2612	11	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	120	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	82.6447820494434	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTCAGTTTGCCCAC	NA	False	NA	-9	True	ATTAAA	-20	NA	84872052	84832197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809_84872010_84872032
Isoform_52767_351	chr15	-	2784	10	FSM	ENSMUSG00000036046.15	ENSMUST00000165743.2	5032	10	-30	2278	-1	2	multi-exon	FALSE	canonical	3	237	junction_4	21.5893206338712	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCAGTTTGCCCA	NA	False	NA	-10	True	ATTAAA	-19	NA	84872202	84832198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
Isoform_52770_12	chr15	-	6767	10	FSM	ENSMUSG00000036046.15	ENSMUST00000047144.13	6845	10	-2	80	-2	-80	multi-exon	FALSE	canonical	3	237	junction_4	21.5893206338712	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCATTGTTTCTGGTG	NA	False	NA	-6	True	AATAAA	-23	NA	84872203	84828216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
Isoform_52776_136	chr15	-	4069	25	FSM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-18	-4	-18	4	multi-exon	FALSE	canonical	3	89	junction_19	18.7071269098764	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTCTGGTCTTGTCTTG	NA	False	NA	-2	True	TATAAA	-21	NA	85016183	84948885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
Isoform_52778_8	chr15	-	3857	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_21	32.0725194338633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTACTCTGGTCTTGTC	NA	False	NA	-5	True	TATAAA	-18	NA	85016178	84948888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011959_85012073_85013871_85014061_85016029
Isoform_52780_7	chr15	-	3880	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-17	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_15	32.4523789545692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTACTCTGGTCTTGTCT	NA	False	NA	-4	True	TATAAA	-19	NA	85016182	84948887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
Isoform_52785_9	chr15	-	3483	4	FSM	ENSMUSG00000022382.16	ENSMUST00000109424.4	3134	4	-358	9	-119	1	multi-exon	FALSE	canonical	1	1	junction_1	2.86744175568088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCAAGTGTGTGTGAC	NA	False	NA	NA	False	AATAAA	-12	NA	85466141	85419646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_85422070_85427869_85428142_85443103_85443331_85465580
Isoform_52786_10	chr15	-	3420	4	FSM	ENSMUSG00000022382.16	ENSMUST00000109424.4	3134	4	-293	7	-54	-3	multi-exon	FALSE	canonical	1	1	junction_1	2.86744175568088	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAAGTGTGTGTGACGT	NA	False	NA	NA	False	AATAAA	-14	NA	85466076	85419644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_85422070_85427869_85428142_85443103_85443331_85465580
Isoform_52787_5	chr15	-	3425	4	FSM	ENSMUSG00000022382.16	ENSMUST00000023015.15	3365	4	-63	3	-63	-3	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAAGTGTGTGTGACGT	NA	False	NA	NA	False	AATAAA	-14	NA	85466085	85419644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_85422070_85427869_85428142_85443107_85443331_85465580
Isoform_52788_17	chr15	-	1558	4	FSM	ENSMUSG00000064284.13	ENSMUST00000125947.8	706	4	-578	-274	-9	-1	multi-exon	FALSE	canonical	3	301	junction_1	22.0151463012778	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGGTTTGAGTCACT	8114	False	NA	-1	True	ATTAAA	-14	NA	85695869	85691173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102
Isoform_5279_9	chr10	-	5567	29	NNC	ENSMUSG00000074657.6	novel	6295	29	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	8.8746227283997	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGCTGTTGCTTCTTA	NA	False	NA	-2	True	AATAAA	-14	NA	127098982	127061566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_127063800_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
Isoform_52790_12	chr15	-	1024	5	FSM	ENSMUSG00000064284.13	ENSMUST00000144067.8	761	5	9	-272	9	0	multi-exon	FALSE	canonical	3	18	junction_4	131.723906334424	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8147	False	NA	0	True	ATTAAA	-15	NA	85695836	85691172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695751
Isoform_52791_78	chr15	-	957	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	39	1	2	-1	multi-exon	FALSE	canonical	3	77	junction_4	106.509389257473	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGGTTTGAGTCACT	8125	False	NA	-1	True	ATTAAA	-14	NA	85695858	85691173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
Isoform_52792_20	chr15	-	823	4	FSM	ENSMUSG00000064284.13	ENSMUST00000150995.8	566	4	27	-284	-11	-1	multi-exon	FALSE	canonical	3	9	junction_3	150.534602888062	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGGTTTGAGTCACT	8112	False	NA	-1	True	ATTAAA	-14	NA	85695871	85691173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695839
Isoform_52793_9	chr15	-	2263	3	ISM	ENSMUSG00000064284.13	ENSMUST00000154814.2	421	4	1	-1253	1	-3	intron_retention	FALSE	canonical	3	306	junction_2	22	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGGTGGTTTGAGTCA	8124	False	NA	-3	True	ATTAAA	-12	NA	85695859	85691175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_85692569_85693412_85693526_85695102
Isoform_52794_3	chr15	-	1691	4	FSM	ENSMUSG00000064284.13	ENSMUST00000154814.2	421	4	-16	-1254	-16	-2	multi-exon	FALSE	canonical	3	77	junction_3	119.678272417715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8107	False	NA	-2	True	ATTAAA	-13	NA	85695876	85691174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_85692569_85693412_85693526_85695102_85695250_85695839
Isoform_52795_3	chr15	-	11157	35	NIC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	181	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_34	10.511527697384	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCTGTGCTGGGTGGT	NA	False	NA	-5	True	AATAAA	-21	NA	85918223	85783129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_85784940_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
Isoform_52796_5	chr15	-	3354	8	FSM	ENSMUSG00000035891.17	ENSMUST00000156546.2	2162	8	0	-1192	0	0	multi-exon	TRUE	canonical	3	9	junction_7	5.62429133857986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCCCTCATCCTC	NA	False	NA	-14	True	AATAAA	-17	NA	86036649	86023329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86036605
Isoform_52797_7	chr15	-	4113	13	FSM	ENSMUSG00000035891.17	ENSMUST00000044332.16	4518	13	405	0	405	0	multi-exon	FALSE	canonical	3	13	junction_10	4.62105687767059	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCCCTCATCCTC	NA	False	NA	-14	True	AATAAA	-17	NA	86069937	86023329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
Isoform_52798_4	chr15	-	1977	13	FSM	ENSMUSG00000035891.17	ENSMUST00000044332.16	4518	13	257	2284	257	-1092	multi-exon	FALSE	canonical	3	13	junction_10	4.62105687767059	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAGCTTTGTCAACAG	NA	False	NA	NA	False	NA	NA	NA	86070085	86025613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
Isoform_5282_3	chr10	-	3615	2	Antisense	novelGene_ENSMUSG00000002147.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTCCATTCTGTAAAT	NA	False	NA	-9	True	NA	NA	NA	127489307	127484134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_127484385_127485942
Isoform_5283_9	chr10	-	1873	2	Antisense	novelGene_ENSMUSG00000019843.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGACATTTACTCATGT	NA	False	NA	1	True	AATAAA	-20	NA	39379306	39377093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_39378860_39379199
Isoform_52831_46	chr15	-	4573	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-76	-262	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88618512	88571498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
Isoform_52832_210	chr15	-	4487	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	7	-262	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88618426	88571498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
Isoform_52833_39	chr15	-	4804	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618481	88571236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
Isoform_52837_18	chr15	-	2597	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7486	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	224.216549845211	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	7656	False	NA	-5	True	NA	NA	NA	88592553	88571236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592298
Isoform_52838_20	chr15	-	2455	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7488	-2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	226.062480075662	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTCCCGTGTTTG	7654	False	NA	-7	True	NA	NA	NA	88592555	88571238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592440
Isoform_52841_29	chr15	-	2393	7	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-408	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	229.394613905577	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88585475	88571237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88585162
Isoform_5285_6	chr10	-	701	2	Intergenic	novelGene_1087	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCCTACTGTGTGGACT	7397	False	NA	25	True	NA	NA	NA	82756748	82753704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_82754279_82756621
Isoform_52855_104	chr15	-	5141	13	FSM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	10	1	7	-1	multi-exon	FALSE	canonical	0	0	junction_12	202.393524819568	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88618426	88571237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
Isoform_52856_114	chr15	-	4875	13	FSM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	10	267	7	-267	multi-exon	FALSE	canonical	0	0	junction_12	202.393524819568	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGGCCCTCTCATTCC	NA	False	NA	-7	True	AATAAA	-14	NA	88618426	88571503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
Isoform_52858_20	chr15	-	5228	13	FSM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	-76	0	-76	0	multi-exon	FALSE	canonical	0	0	junction_12	202.393524819568	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618512	88571236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
Isoform_5286_3	chr10	-	609	2	Intergenic	novelGene_1088	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGATGTTTTGTTTGT	7412	False	NA	0	True	TTTAAA	-36	NA	82756733	82753729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_82754279_82756673
Isoform_52860_11	chr15	-	2734	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-7492	-262	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	242.987863978464	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	7650	False	NA	-2	True	AATAAA	-19	NA	88592559	88571498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88592298
Isoform_52865_16	chr15	-	4652	12	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	224.227710409981	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88618435	88571237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
Isoform_5287_6	chr10	-	4426	2	Antisense	novelGene_ENSMUSG00000020088.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAAAACAAAAGCACTCT	NA	False	NA	NA	False	NA	NA	NA	61522114	61511296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_61511374_61517765
Isoform_52870_220	chr15	-	4126	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	7	12046	7	2003	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAATAATGAAAAGTACAAA	NA	False	NA	12	True	AATAAA	-33	NA	88618426	88595099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
Isoform_52871_50	chr15	-	4202	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	-79	12056	-76	1993	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAAGTAATAATGA	NA	False	NA	2	True	AATAAA	-23	NA	88618512	88595109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
Isoform_52877_55	chr15	-	2104	10	FSM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	25	1	-8	0	multi-exon	FALSE	canonical	0	0	junction_5	14.1691718917785	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTCTTGTTGTTGGT	9269	False	NA	-1	True	AATAAA	-16	NA	88703496	88689447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
Isoform_52879_4	chr15	-	1181	2	NNC	ENSMUSG00000093394.2	novel	1234	2	NA	NA	337	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCCAATGTGTGACAG	NA	False	NA	-4	True	NA	NA	NA	88775349	88773983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_88775099_88775283
Isoform_52880_10	chr15	-	5880	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-76	1831	-51	222	multi-exon	FALSE	canonical	3	40	junction_22	13.0596920161065	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTGTGCTAAGGGCG	NA	False	NA	NA	False	AAAACA	-23	NA	89007366	88984390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
Isoform_52881_33	chr15	-	6944	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-53	744	-28	-3	multi-exon	FALSE	canonical	3	40	junction_22	13.0596920161065	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCTCTGGGTTGTTAC	NA	False	NA	-5	True	ACTAAA	-14	NA	89007343	88983303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
Isoform_52882_6	chr15	-	7717	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-83	1	-58	-1	multi-exon	TRUE	canonical	3	40	junction_22	13.0596920161065	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGAGTTTGCTTAATG	NA	False	NA	NA	False	TATAAA	-15	NA	89007373	88982560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
Isoform_52883_3	chr15	-	7840	23	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	40	junction_20	12.6510705782894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCTCTGGGTTGTTAC	NA	False	NA	-5	True	ACTAAA	-14	NA	89007326	88983303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
Isoform_52884_15	chr15	-	2339	3	ISM	ENSMUSG00000051786.16	ENSMUST00000041656.14	5357	25	-256	14737	-30	3292	5prime_fragment	FALSE	canonical	3	50	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89007345	88999349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_89000459_89004712_89004877_89006279
Isoform_52886_3	chr15	-	3372	2	ISM	ENSMUSG00000051786.16	ENSMUST00000041656.14	5357	25	-287	17989	-61	40	5prime_fragment	FALSE	canonical	3	52	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	89007376	89002601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_89004877_89006279
Isoform_52887_28	chr15	-	2353	20	FSM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	61	-2	12	2	multi-exon	FALSE	canonical	3	17	junction_4	5.98567079345711	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTCTCCGTTACTG	NA	False	NA	-1	True	AATAAA	-19	NA	89012842	89007507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008457_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
Isoform_52888_23	chr15	-	2386	20	FSM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	28	-2	7	2	multi-exon	FALSE	canonical	3	17	junction_4	5.98567079345711	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTCTCCGTTACTG	NA	False	NA	-1	True	AATAAA	-19	NA	89012875	89007507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008457_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
Isoform_52889_6	chr15	-	1841	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	-34	1	-3	0	multi-exon	FALSE	canonical	2	7	junction_5	1.87634249459548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTTGTGTGGCCCCA	NA	False	NA	NA	False	AATAAA	-19	NA	89024858	89014787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
Isoform_52890_4	chr15	-	1904	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	-97	1	-15	0	multi-exon	FALSE	canonical	2	7	junction_5	1.87634249459548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTTGTGTGGCCCCA	NA	False	NA	NA	False	AATAAA	-19	NA	89024921	89014787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
Isoform_52891_3	chr15	-	2159	10	ISM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	3043	-3	201	2	3prime_fragment	FALSE	canonical	2	7	junction_8	6.23213496105785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTCTGGATCCCATTGC	NA	False	NA	-10	True	AATAAA	-31	NA	89030788	89026686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673
Isoform_52892_44	chr15	-	2434	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	29	-2	29	1	multi-exon	FALSE	canonical	2	7	junction_8	5.74096487412616	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTCTGGATCCCATTG	NA	False	NA	-11	True	AATAAA	-30	NA	89033802	89026687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
Isoform_52893_14	chr15	-	6355	39	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_38	84.6279007121609	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9207	False	NA	-5	True	AATACA	-19	NA	89064927	89039751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89040381_89040458_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
Isoform_5292_7	chr10	-	896	2	Intergenic	novelGene_1290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	130378115	130363810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_130364392_130377800
Isoform_52928_111	chr15	-	6464	38	FSM	ENSMUSG00000036606.18	ENSMUST00000109331.9	6497	38	31	2	31	-2	multi-exon	FALSE	canonical	0	0	junction_37	73.775209877053	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9174	False	NA	-7	True	AATACA	-17	NA	89064960	89039753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
Isoform_52929_209	chr15	-	6434	38	FSM	ENSMUSG00000036606.18	ENSMUST00000109331.9	6497	38	63	0	63	0	multi-exon	FALSE	canonical	0	0	junction_37	73.775209877053	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9206	False	NA	-5	True	AATACA	-19	NA	89064928	89039751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
Isoform_5293_3	chr10	-	530	2	Antisense	novelGene_ENSMUSG00000091415.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATATTTAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	41291467	41290824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_41291079_41291191
Isoform_52931_6	chr15	-	6534	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-3418	-6	intron_retention	FALSE	canonical	0	0	junction_37	73.775209877053	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTGGTTGACTGGGTT	NA	False	NA	-11	True	AATACA	-13	NA	89058309	89039757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89058142
Isoform_52933_16	chr15	-	6416	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	31	0	intron_retention	FALSE	canonical	3	14	junction_36	72.4702312234496	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9174	False	NA	-5	True	AATACA	-19	NA	89064960	89039751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89064867
Isoform_52935_4	chr15	-	1946	20	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	23.4946802489415	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080663	89069014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_52937_47	chr15	-	1997	20	FSM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	-11	2599	6	0	multi-exon	FALSE	canonical	3	25	junction_9	20.4859251730037	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080662	89069014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_52939_11	chr15	-	2284	20	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_19	26.5207805419452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080668	89069014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
Isoform_5294_3	chr10	-	2495	6	Fusion	ENSMUSG00000111973.2_ENSMUSG00000034620.18	novel	644	4	NA	NA	37	1249	multi-exon	FALSE	canonical	2	5	junction_1	116.604288085816	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGCAAGATTTTCAATA	NA	False	NA	NA	False	AATAAA	-14	NA	121932994	121903791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr10_-_121905352_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
Isoform_52940_31	chr15	-	2099	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	70	junction_7	13.724358808023	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080667	89069014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_52941_4	chr15	-	2134	20	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_15	30.8850069857479	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080657	89069015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073374_89073421_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_52942_3	chr15	-	2233	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	23	0	intron_retention	FALSE	canonical	3	8	junction_8	23.6476188345298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080624	89069014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_52943_3	chr15	-	2605	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	4	-1	intron_retention	FALSE	canonical	3	17	junction_18	26.944387170615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080664	89069015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
Isoform_52944_4	chr15	-	2415	18	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	5	-1	intron_retention	FALSE	canonical	3	78	junction_13	12.7232996090313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAGTCTGGTCCCTGAC	NA	False	NA	-5	True	AGTAAA	-13	NA	89080663	89069020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_52945_3	chr15	-	2559	17	NIC	ENSMUSG00000015377.11	novel	2028	18	NA	NA	0	2	intron_retention	FALSE	canonical	3	78	junction_12	12.8048757803424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080668	89069017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_5295_3	chr10	-	2355	8	NNC	ENSMUSG00000034602.16	novel	9301	36	NA	NA	3	-5377	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	53.4919410294863	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTAAGTACAGACTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	122912285	122876569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_122877721_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
Isoform_52955_295	chr15	-	6187	41	FSM	ENSMUSG00000036529.18	ENSMUST00000144585.9	6165	41	-20	-2	-4	2	multi-exon	FALSE	canonical	3	242	junction_22	71.0688002923927	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTACGCCTGCATCAGCA	NA	False	NA	-13	True	TATAAA	-19	NA	89199478	89172483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
Isoform_52956_18	chr15	-	6262	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	0	intron_retention	FALSE	canonical	3	242	junction_22	71.9735962251656	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199478	89172485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
Isoform_52958_4	chr15	-	6480	39	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-9	2	intron_retention	FALSE	canonical	3	242	junction_21	72.0484072807286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTACGCCTGCATCAGCA	NA	False	NA	-13	True	TATAAA	-19	NA	89199483	89172483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
Isoform_52959_13	chr15	-	6111	40	FSM	ENSMUSG00000036529.18	ENSMUST00000123791.8	6190	40	35	44	-5	3	multi-exon	FALSE	canonical	2	8	junction_12	87.3656082615084	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199479	89172482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
Isoform_5296_3	chr10	-	1457	2	Genic_Genomic	ENSMUSG00000112850.2	novel	1120	1	NA	NA	-946	55	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	128387628	128385507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_128386839_128387502
Isoform_52961_5	chr15	-	6265	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-9	0	intron_retention	FALSE	canonical	3	242	junction_21	71.6320130887392	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGTACGCCTGCAT	NA	False	NA	-18	True	TATAAA	-14	NA	89199483	89172488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89172929_89173014_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
Isoform_52963_4	chr15	-	6275	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	3	intron_retention	FALSE	canonical	3	242	junction_21	71.8619466893678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199479	89172482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
Isoform_52966_7	chr15	-	3385	12	ISM	ENSMUSG00000022614.9	ENSMUST00000231067.2	3262	13	-19	4	2	0	intron_retention	FALSE	canonical	3	165	junction_11	31.5424415642593	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTACTAGTGGTTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	89239834	89235345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629
Isoform_52967_14	chr15	-	2881	13	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	165	junction_11	30.2002575412124	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239864	89235341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89239021_89239558
Isoform_52970_8	chr15	-	3312	13	FSM	ENSMUSG00000022614.9	ENSMUST00000231067.2	3262	13	-53	3	-6	1	multi-exon	FALSE	canonical	0	0	junction_12	69.3126471544375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTACTAGTGGTTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	89239868	89235344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766
Isoform_52972_559	chr15	-	2685	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	86	135	1	0	multi-exon	FALSE	canonical	0	0	junction_12	66.7675469479281	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239776	89235341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
Isoform_52974_18	chr15	-	2912	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	-2	-4	-2	4	multi-exon	TRUE	canonical	0	0	junction_12	66.7675469479281	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGTGTGGCGAGGGCT	NA	False	NA	NA	False	AATAAA	-23	NA	89239864	89235202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
Isoform_52977_16	chr15	-	2599	15	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	79.1957340120936	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239866	89235342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558_89239614_89239788
Isoform_52978_17	chr15	-	2512	14	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	83.9641371739205	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTACTAGTGGTTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	89239837	89235345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239788
Isoform_52984_3	chr15	-	1396	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	-247	-4	-219	4	multi-exon	FALSE	canonical	3	56	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGCTCTGTACCAGC	NA	False	NA	-3	True	ATTAAA	-18	NA	89258268	89255835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89256669_89257625_89257806_89257885
Isoform_52985_22	chr15	-	1210	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	-59	-6	-31	6	multi-exon	FALSE	canonical	3	56	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTCTGTACCAGCAG	NA	False	NA	-1	True	ATTAAA	-20	NA	89258080	89255833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89256669_89257625_89257806_89257885
Isoform_52987_3	chr15	-	1485	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	-335	-5	-307	5	multi-exon	FALSE	canonical	3	56	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCTCTGTACCAGCA	NA	False	NA	-2	True	ATTAAA	-19	NA	89258356	89255834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89256669_89257625_89257806_89257885
Isoform_52988_71	chr15	-	1336	4	ISM	ENSMUSG00000022615.8	ENSMUST00000023285.5	2037	11	2928	-300	2928	300	3prime_fragment	FALSE	canonical	3	35	junction_3	10.6770782520313	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTCTGTACCAGCAG	NA	False	NA	-1	True	ATTAAA	-20	NA	89258314	89255833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_89256669_89257625_89257806_89257885_89258027_89258134
Isoform_52992_29	chr15	-	2907	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-12	0	-12	0	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCCATGGGACTAC	5204	False	NA	NA	False	AATAAA	-19	NA	89310078	89300607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
Isoform_52993_246	chr15	-	2691	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-12	216	-12	-216	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTAGGTGCCTAT	5204	False	NA	NA	False	AATAAA	-22	NA	89310078	89300823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
Isoform_52994_12	chr15	-	2849	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-172	218	-172	-218	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGCTGTTAGGTGCCT	5044	False	NA	NA	False	AATAAA	-20	NA	89310238	89300825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
Isoform_52996_27	chr15	-	1374	10	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1654	False	NA	NA	False	AATAAA	-23	NA	89313628	89310569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
Isoform_52997_8	chr15	-	1850	10	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	-1	1	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1179	False	NA	NA	False	AATAAA	-24	NA	89314103	89310568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
Isoform_52998_5	chr15	-	1533	9	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	27	0	intron_retention	FALSE	canonical	3	62	junction_3	111.432434685777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1676	False	NA	NA	False	AATAAA	-23	NA	89313606	89310569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89313031_89313251_89313361_89313579
Isoform_52999_4	chr15	-	2074	9	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	-29	0	intron_retention	FALSE	canonical	3	62	junction_3	111.432434685777	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	1142	False	NA	NA	False	AATAAA	-30	NA	89314140	89310562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89313031_89313251_89313361_89313579
Isoform_53_5	ERCC-00039	+	723	1	FSM	ERCC-00039A	DQ883656	724	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00039_+_0_700
Isoform_5300_5	chr10	+	2150	4	FSM	ENSMUSG00000040653.7	ENSMUST00000043374.7	2617	4	466	1	-21	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTTTGTGTATGTC	NA	False	NA	NA	False	AATAAA	-15	NA	3316522	3414974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_3316970_3373493_3373578_3375733_3375767_3413388
Isoform_53002_5	chr15	-	1414	10	ISM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	513	-1	44	1	intron_retention	FALSE	canonical	3	146	junction_8	78.7223594447169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1693	False	NA	NA	False	AATAAA	-24	NA	89313589	89310568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251
Isoform_53003_41	chr15	-	1727	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	-19	-1	-10	1	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1161	False	NA	NA	False	AATAAA	-24	NA	89314121	89310568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
Isoform_53004_93	chr15	-	1211	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	497	-1	28	1	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1677	False	NA	NA	False	AATAAA	-24	NA	89313605	89310568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
Isoform_53006_5	chr15	-	1767	11	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	112.30422966211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATACAGACTTAAGTGAC	1157	False	NA	NA	False	AATAAA	-26	NA	89314125	89310566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312782_89312916_89313031_89313251_89313361_89313579
Isoform_53007_8	chr15	-	1245	11	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	28	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	112.30422966211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1677	False	NA	NA	False	AATAAA	-24	NA	89313605	89310568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312782_89312916_89313031_89313251_89313361_89313579
Isoform_53008_8	chr15	-	1575	9	FSM	ENSMUSG00000022617.16	ENSMUST00000170334.8	2063	9	481	7	51	0	multi-exon	FALSE	canonical	3	290	junction_3	35.8355619462009	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1700	False	NA	NA	False	AATAAA	-23	NA	89313582	89310569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251
Isoform_53011_19	chr15	-	1896	10	FSM	ENSMUSG00000022617.16	ENSMUST00000171140.8	1416	10	-479	-1	-10	1	multi-exon	FALSE	canonical	3	259	junction_9	49.0736408087093	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1161	False	NA	NA	False	AATAAA	-24	NA	89314121	89310568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
Isoform_53012_69	chr15	-	1379	10	FSM	ENSMUSG00000022617.16	ENSMUST00000171140.8	1416	10	37	0	28	0	multi-exon	FALSE	canonical	3	259	junction_9	49.0736408087093	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1677	False	NA	NA	False	AATAAA	-23	NA	89313605	89310569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
Isoform_53013_8	chr15	-	1107	10	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	121.483525276394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	1653	False	NA	NA	False	AATAAA	-30	NA	89313629	89310562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312916_89313031_89313251_89313361_89313579
Isoform_53015_32	chr15	-	2693	8	ISM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	1270	23	-42	-23	3prime_fragment	FALSE	canonical	3	62	junction_5	9.89743318610787	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAGTTGTCTACAA	NA	False	NA	NA	False	NA	NA	NA	89360358	89356701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
Isoform_53017_5	chr15	-	3465	9	FSM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	9	18	-5	-18	multi-exon	FALSE	canonical	3	8	junction_8	23.5358768691545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTGTCTACAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	89361619	89356696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710_89360859_89361352
Isoform_5302_5	chr10	+	3256	8	ISM	ENSMUSG00000040624.19	ENSMUST00000154727.2	5405	15	36630	8002	-17675	-4230	internal_fragment	FALSE	canonical	3	21	junction_6	4.51753951452626	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGAGACCAGAATGCAT	NA	False	NA	NA	False	AATAAA	-21	NA	3890215	3909296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545
Isoform_53023_63	chr15	-	1609	9	FSM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	29	2	-4	-2	multi-exon	FALSE	canonical	3	40	junction_3	5.95818764390649	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAAGGGTCTCAGTTA	18	True	NA	-6	True	AATAAA	-15	NA	89476097	89466737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89476022
Isoform_53024_4	chr15	-	1486	7	NIC	ENSMUSG00000022621.17	novel	1640	9	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	15.3514385862259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAAGGGTCTCAGTTA	1360	False	NA	-6	True	AATAAA	-15	NA	89476084	89466737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89474475_89474630_89476022
Isoform_53025_6	chr15	-	3305	20	FSM	ENSMUSG00000052560.16	ENSMUST00000064391.12	3366	20	64	-3	3	2	multi-exon	FALSE	canonical	0	0	junction_15	2.20676371507754	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCTTATGTGTATTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	90563571	90371682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_90373379_90381267_90381342_90384087_90384146_90385613_90385717_90393697_90393826_90400110_90400293_90406110_90406158_90424434_90424497_90425459_90425514_90436176_90436253_90452451_90452494_90453662_90453768_90456147_90456252_90469080_90469145_90486015_90486093_90499313_90499354_90503834_90503939_90532780_90532828_90533445_90533487_90563370
Isoform_5303_7	chr10	+	6028	9	ISM	ENSMUSG00000040624.19	ENSMUST00000154727.2	5405	15	36663	2	-17642	-2	intron_retention	FALSE	canonical	3	21	junction_6	4.22603537609424	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAATTTTCATTGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	3890248	3917296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545_3908206_3913400
Isoform_53031_50	chr15	-	6521	7	FSM	ENSMUSG00000036197.17	ENSMUST00000230063.2	4427	7	20	-2114	2	2	multi-exon	FALSE	canonical	3	41	junction_3	8.55699843532896	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTAAATTTTTTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	93173040	93137620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93172756
Isoform_53033_29	chr15	-	1860	5	FSM	ENSMUSG00000022634.10	ENSMUST00000133736.2	1870	5	12	-2	12	-1	multi-exon	FALSE	canonical	3	44	junction_2	48.2875501552937	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCATTTTGTTTACA	NA	False	NA	-2	True	AATAAA	-19	NA	93234804	93182159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_93183504_93184290_93184444_93215419_93215490_93234220_93234347_93234637
Isoform_53034_4	chr15	-	2244	5	FSM	ENSMUSG00000022634.10	ENSMUST00000133736.2	1870	5	12	-386	12	383	multi-exon	TRUE	canonical	3	44	junction_2	48.2875501552937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCTCAGATACCTCATT	NA	False	NA	-12	True	AGTAAA	-13	NA	93234804	93181775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_93183504_93184290_93184444_93215419_93215490_93234220_93234347_93234637
Isoform_53035_3	chr15	-	1684	3	ISM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	282	1	282	-1	3prime_fragment	FALSE	canonical	3	141	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCATTTTGTTTACA	NA	False	NA	-2	True	AATAAA	-19	NA	93234407	93182159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_93183504_93184290_93184444_93234220
Isoform_53038_22	chr15	-	1852	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-176	0	-49	0	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCATTTTGTTTACAA	NA	False	NA	-1	True	AATAAA	-20	NA	93234865	93182158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
Isoform_53041_46	chr15	-	1790	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-115	1	12	-1	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCATTTTGTTTACA	NA	False	NA	-2	True	AATAAA	-19	NA	93234804	93182159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
Isoform_53042_9	chr15	-	2176	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-117	-383	10	383	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCTCAGATACCTCATT	NA	False	NA	-12	True	AGTAAA	-13	NA	93234806	93181775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
Isoform_53043_4	chr15	-	2247	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-176	-395	-49	395	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATTCTTCAGTGTTGT	NA	False	NA	0	True	AGTAAA	-25	NA	93234865	93181763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
Isoform_53044_11	chr15	-	841	8	FSM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	-6	15	-6	1	multi-exon	FALSE	canonical	3	32	junction_1	229.028917165408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTTGTGGAATAGTG	NA	False	NA	-13	True	AATAAA	-15	NA	93296188	93283992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_93284165_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
Isoform_53045_13	chr15	-	901	9	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	285.365965691426	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTTGTGGAATAGTG	NA	False	NA	-13	True	AATAAA	-15	NA	93296187	93283992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93291587_93291646_93293467_93293497_93295050_93295137_93296043
Isoform_53046_172	chr15	-	844	8	FSM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	27	6	-6	1	multi-exon	FALSE	canonical	3	583	junction_1	44.8289265214016	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTTGTGGAATAGTG	NA	False	NA	-13	True	AATAAA	-15	NA	93296188	93283992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
Isoform_53048_8	chr15	-	729	7	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	235.838515844116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTTGTGGAATAGTG	NA	False	NA	-13	True	AATAAA	-15	NA	93296185	93283992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93293467_93293497_93295050_93295137_93296043
Isoform_53049_4	chr15	-	1008	9	NNC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	289.359637821172	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTTGTGGAATAGTG	NA	False	NA	-13	True	AATAAA	-15	NA	93296188	93283992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_93284168_93285113_93285278_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
Isoform_53052_5	chr15	-	2706	2	ISM	ENSMUSG00000036158.13	ENSMUST00000109255.3	4144	8	16051	-3	16051	3	3prime_fragment	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGAGTCCGCATCTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	93401353	93396991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_93399185_93400840
Isoform_53054_11	chr15	-	2071	7	ISM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	6630	3	6569	-3	3prime_fragment	FALSE	canonical	3	43	junction_6	2.26691175145591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGAATTGTCTCTATGT	NA	False	NA	-6	True	AATAAA	-24	NA	94434798	94420571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394
Isoform_53057_81	chr15	-	2780	9	FSM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	61	-1	0	1	multi-exon	FALSE	canonical	3	33	junction_8	4.64858849544676	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTGTCTCTATGTTTTA	NA	False	NA	-2	True	AATAAA	-28	NA	94441367	94420567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
Isoform_53068_597	chr15	-	2987	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	41	-3	41	3	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	94487719	94475828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
Isoform_53069_16	chr15	-	3088	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	-61	-2	-51	2	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTATGTTGGCTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	94487821	94475829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
Isoform_53083_38	chr15	-	2888	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	62	3	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	174.476242462043	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	94487698	94475828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
Isoform_53084_15	chr15	-	2927	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	22	2	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	174.476242462043	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTATGTTGGCTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	94487738	94475829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
Isoform_53090_25	chr15	-	3436	21	NNC	ENSMUSG00000022454.18	novel	3220	21	NA	NA	-58548	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	3.2542280190546	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCCATGCGAGCCCGCGT	NA	False	NA	-2	True	AATAAA	-20	NA	95484988	95117332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157_95425287_95425681_95425768_95484686
Isoform_53092_5	chr15	-	1233	2	ISM	ENSMUSG00000045608.8	ENSMUST00000229611.2	477	3	-38	-364	-38	364	intron_retention	FALSE	canonical	3	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGTTCTCTCCAAGTT	NA	False	NA	-15	True	ATTAAA	-12	NA	95530747	95522254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_95522899_95530158
Isoform_53093_5	chr15	-	882	3	FSM	ENSMUSG00000045608.8	ENSMUST00000229611.2	477	3	-40	-365	-40	365	multi-exon	FALSE	canonical	2	7	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTTCTCTCCAAGTTT	NA	False	NA	-14	True	ATTAAA	-13	NA	95530749	95522253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_95522899_95530158_95530347_95530700
Isoform_53094_4	chr15	-	894	3	NNC	ENSMUSG00000045608.8	novel	477	3	NA	NA	-38	364	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGTTCTCTCCAAGTT	NA	False	NA	-15	True	ATTAAA	-12	NA	95530747	95522254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_95522899_95530158_95530347_95530685
Isoform_53096_86	chr15	-	4879	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-7	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGGGTGTAATGGGA	NA	False	NA	-10	True	AATAAA	-15	NA	96358712	96312459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
Isoform_53097_50	chr15	-	4931	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-40	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGGGTGTAATGGGA	NA	False	NA	-10	True	AATAAA	-15	NA	96358764	96312459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
Isoform_53098_21	chr15	-	7756	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTACTGGTGACTGTATA	NA	False	NA	-5	True	NA	NA	NA	96358712	96309582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
Isoform_53108_46	chr15	-	4885	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	-43	924	-43	-8	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAGGGTGTAATGGG	NA	False	NA	-11	True	AATAAA	-14	NA	96358767	96312460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
Isoform_53109_54	chr15	-	4829	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	12	925	-7	-9	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCAAGGGTGTAATGG	NA	False	NA	-12	True	AATAAA	-13	NA	96358712	96312461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
Isoform_53113_11	chr15	-	7700	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	20	-1954	1	-3	multi-exon	TRUE	canonical	3	72	junction_2	59.5770809240313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTACTGGTGACTGTATA	NA	False	NA	-5	True	NA	NA	NA	96358704	96309582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
Isoform_5312_921	chr10	+	3638	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	26	5	0	-5	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGTGTTCAGCTAGTAA	NA	False	NA	9	True	AATAAA	-14	NA	3923143	4106106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
Isoform_5313_97	chr10	+	3690	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	-26	5	-26	-5	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGTGTTCAGCTAGTAA	NA	False	NA	9	True	AATAAA	-14	NA	3923091	4106106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
Isoform_53146_37	chr15	-	2740	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	441	2	441	-2	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACAATGGTTTGTTTCCC	NA	False	NA	-5	True	ATTAAA	-22	NA	96539402	96473869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
Isoform_53152_42	chr15	-	7276	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	475	-4568	475	-1	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGAGTCTCGTATGAT	NA	False	NA	-18	True	ATTAAA	-15	NA	96539368	96469299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
Isoform_53164_35	chr15	-	2554	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-164	4576	-15	-7	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGAACAATGGTTTGT	NA	False	NA	-10	True	ATTAAA	-17	NA	96540295	96473874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
Isoform_53172_22	chr15	-	7104	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-137	-1	12	1	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGAGTCTCGTATGATTC	NA	False	NA	-16	True	ATTAAA	-17	NA	96540268	96469297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
Isoform_53173_45	chr15	-	7071	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-106	1	43	-1	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGAGTCTCGTATGAT	NA	False	NA	-18	True	ATTAAA	-15	NA	96540237	96469299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
Isoform_53183_51	chr15	-	2678	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	20	4568	20	1	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGGTTTGTTTCCCTCT	NA	False	NA	-2	True	ATTAAA	-25	NA	96540774	96473866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
Isoform_5319_346	chr10	+	3538	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	0	-3	0	3	multi-exon	FALSE	canonical	3	127	junction_27	66.4418431300526	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCTAGTAAAGCCACTC	NA	False	NA	17	True	AATAAA	-22	NA	3923143	4106114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
Isoform_53192_20	chr15	-	7277	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	-13	2	-13	-2	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	-19	True	ATTAAA	-14	NA	96540807	96469300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
Isoform_5320_68	chr10	+	3580	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	-50	5	-24	-5	multi-exon	FALSE	canonical	3	127	junction_27	66.4418431300526	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGTGTTCAGCTAGTAA	NA	False	NA	9	True	AATAAA	-14	NA	3923093	4106106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
Isoform_53213_42	chr15	-	4396	15	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	859	-5	-180	5	3prime_fragment	FALSE	canonical	3	258	junction_12	29.2041547225943	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGATTTTTTGTTTCCT	812	False	NA	-3	True	AATAAA	-21	NA	96596752	96585267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495
Isoform_53216_463	chr15	-	4637	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	23	0	23	0	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	96597588	96585272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
Isoform_53225_12	chr15	-	4439	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	-30	251	-30	-251	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCTAAAGCTTTAAATGA	NA	False	NA	-1	True	AATAAA	-28	NA	96597641	96585523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
Isoform_53227_11	chr15	-	4522	16	NNC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	-440	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	83.7718064479665	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCAGTAGGATTTTTTG	552	False	NA	-9	True	AATAAA	-15	NA	96597012	96585273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96596826
Isoform_53229_27	chr15	-	4546	15	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	3	5	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	84.1414018792418	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGATTTTTTGTTTCCT	NA	False	NA	-3	True	AATAAA	-21	NA	96597608	96585267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96596062_96596145_96596495_96596699_96597288
Isoform_53232_12	chr15	-	914	3	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	21	-8190	intron_retention	FALSE	canonical	3	252	junction_2	29.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-18	NA	96597590	96595735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_96596145_96596495_96596699_96597288
Isoform_53258_3046	chr15	-	3929	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	7	-4	7	1	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	3046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATGATCTTCTTTCGTG	NA	False	NA	-8	True	AATAAA	-20	NA	96953830	96892699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
Isoform_53259_51	chr15	-	3953	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	-20	-1	-20	1	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTATGATCTTCTTTC	NA	False	NA	-11	True	AATAAA	-17	NA	96953857	96892702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
Isoform_53283_40	chr15	-	1704	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	3	-1197	2	941	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTTGCTTGCTTGCT	NA	False	NA	-5	True	NA	NA	NA	97065121	97057872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
Isoform_53284_103	chr15	-	765	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	3	-258	2	2	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGATCATACCATAGCCA	NA	False	NA	-8	True	AATAAA	-19	NA	97065121	97058811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
Isoform_53288_239	chr15	-	788	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACCATAGCCATTTTAA	NA	False	NA	-2	True	AATAAA	-25	NA	97065122	97058805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
Isoform_53291_119	chr15	-	1729	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-6	940	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCACTGTTGCTTGCTTGC	NA	False	NA	-6	True	NA	NA	NA	97065131	97057873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
Isoform_53303_16	chr15	-	635	3	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	28	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCCTGATCATACCATA	NA	False	NA	-12	True	AATAAA	-15	NA	97065123	97058815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_97059277_97064383_97064492_97065057
Isoform_53306_49	chr15	-	649	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	4	2	2	-2	multi-exon	FALSE	canonical	3	219	junction_1	244.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCCTGATCATACCATA	NA	False	NA	-12	True	AATAAA	-15	NA	97065121	97058815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97059277_97064383_97064508_97065057
Isoform_53309_28	chr15	-	1612	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-16	-941	-16	941	multi-exon	FALSE	canonical	3	219	junction_1	244.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTTGCTTGCTTGCT	NA	False	NA	-5	True	NA	NA	NA	97065141	97057872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97059277_97064383_97064508_97065057
Isoform_53312_556	chr15	-	2254	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	19	-2	19	2	multi-exon	FALSE	canonical	3	236	junction_16	35.978292066189	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCGATATTTCATTTTA	NA	False	NA	-1	True	AATAAA	-27	NA	97603687	97572975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
Isoform_53315_5	chr15	-	3665	28	NIC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-45	11	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	10.9312604679598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGCCTGGGTGTGTGGCT	314	False	NA	-7	True	CATAAA	-24	NA	97665592	97642822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648036_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
Isoform_53317_44	chr15	-	3701	28	FSM	ENSMUSG00000022469.18	ENSMUST00000126854.9	4005	28	134	170	-46	13	multi-exon	TRUE	canonical	3	28	junction_8	8.12572672702261	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGTGTGTGGCTGG	313	False	NA	-5	True	CATAAA	-26	NA	97665593	97642820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
Isoform_53318_14	chr15	-	3853	28	FSM	ENSMUSG00000022469.18	ENSMUST00000126854.9	4005	28	-37	189	-37	-3	multi-exon	FALSE	canonical	3	28	junction_8	8.12572672702261	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATACGTGTGTGTTCTAC	142	False	NA	-24	True	CATAAA	-7	NA	97665764	97642839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
Isoform_53322_5	chr15	-	3942	28	FSM	ENSMUSG00000022469.18	ENSMUST00000126854.9	4005	28	-121	184	5	-1	multi-exon	FALSE	canonical	3	28	junction_8	8.12572672702261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGTGTTCTACCGCCT	58	False	NA	-19	True	CATAAA	-12	NA	97665848	97642834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
Isoform_53325_5	chr15	-	2238	12	ISM	ENSMUSG00000022475.20	ENSMUST00000121514.8	3767	23	12207	38	4977	-1	3prime_fragment	FALSE	canonical	2	9	junction_9	5.47420698811804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAAAAGTGAAA	5277	False	NA	-62	True	NA	NA	NA	97700537	97690606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310
Isoform_53328_10	chr15	-	4057	25	NIC	ENSMUSG00000022475.20	novel	4069	26	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_20	5.27029806241228	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATATATGTTTTATTTGC	2261	False	NA	-23	True	NA	NA	NA	97729377	97690567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
Isoform_53329_21	chr15	-	3934	24	FSM	ENSMUSG00000022475.20	ENSMUST00000088402.12	4223	24	272	17	-1	-8	multi-exon	FALSE	canonical	2	7	junction_19	5.55841976156414	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTTCTGAACAATATAT	2262	False	NA	-34	True	NA	NA	NA	97729376	97690578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
Isoform_53330_4	chr15	-	2302	7	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	31455	1769	-17157	1343	3prime_fragment	FALSE	canonical	0	0	junction_4	0.957427107756338	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAACAGTGGCCCAGAT	NA	False	NA	NA	False	AATAAA	-37	NA	97774736	97754074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997_97765170_97767198_97767305_97767526_97767712_97774604
Isoform_53331_4	chr15	-	1018	3	ISM	ENSMUSG00000022483.18	ENSMUST00000088355.12	4862	53	27273	13	11537	-13	3prime_fragment	FALSE	canonical	3	15	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGGAAAGGATATGGTG	9670	False	NA	NA	False	ATTAAA	-18	NA	97875265	97873495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_97874068_97874522_97874766_97875062
Isoform_53338_9	chr15	-	4190	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	120	-504	120	3	multi-exon	FALSE	canonical	3	73	junction_18	49.2407790452959	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGGGCCCTTTCACAGT	6581	False	NA	-1	True	AATAAA	-16	NA	97991012	97939109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
Isoform_53341_5	chr15	-	6672	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	120	-2986	120	-3	multi-exon	FALSE	canonical	3	73	junction_18	49.2407790452959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCCCTGGACTCAATAC	6581	False	NA	-1	True	AATAAA	-33	NA	97991012	97936627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
Isoform_53345_7	chr15	-	6442	19	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	35	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_10	47.9875562573836	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCTGGACTCAATACTA	6178	False	NA	1	True	AATAAA	-35	NA	97991415	97936625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
Isoform_53348_9	chr15	-	3727	19	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	74	junction_10	47.9875562573836	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	6408	False	NA	-2	True	AATAAA	-15	NA	97991185	97939110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
Isoform_53351_4	chr15	-	3987	17	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	4612	2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_16	60.3349699075917	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	NA	False	NA	-2	True	AATAAA	-15	NA	97980813	97939110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97980352
Isoform_53358_23	chr15	-	4257	18	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	6433	False	NA	-4	True	AATAAA	-13	NA	97991160	97939112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
Isoform_53362_12	chr15	-	6731	18	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-21	-7	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAACTCCCTGGACTCA	6440	False	NA	-5	True	AATAAA	-29	NA	97991153	97936631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
Isoform_53365_27	chr15	-	3880	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	210	2485	35	3	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGGGCCCTTTCACAGT	6178	False	NA	-1	True	AATAAA	-16	NA	97991415	97939109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
Isoform_53367_42	chr15	-	3685	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	404	2486	30	2	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	6372	False	NA	-2	True	AATAAA	-15	NA	97991221	97939110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
Isoform_53373_14	chr15	-	6352	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	210	13	35	-13	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTGGGAACTCCCTG	6178	False	NA	-11	True	AATAAA	-23	NA	97991415	97936637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
Isoform_53375_28	chr15	-	6128	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	440	7	1	-7	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAACTCCCTGGACTCA	6408	False	NA	-5	True	AATAAA	-29	NA	97991185	97936631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
Isoform_53383_4	chr15	-	2276	2	FSM	ENSMUSG00000033075.18	ENSMUST00000182611.2	853	2	-200	-1223	164	589	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTCTTGGTGTCTGTT	6625	False	NA	NA	False	NA	NA	NA	97990968	97985848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97987685_97990528
Isoform_53384_6	chr15	-	1892	2	FSM	ENSMUSG00000033075.18	ENSMUST00000180531.2	1270	2	-35	-587	30	587	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGGTCTTGGTGTCTG	6372	False	NA	NA	False	NA	NA	NA	97991221	97985850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97987685_97991163
Isoform_53386_149	chr15	-	2165	4	FSM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	-47	-1069	0	-8	multi-exon	FALSE	canonical	3	32	junction_3	39.6848697728604	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAATTTGGCCACTTC	NA	False	NA	-8	True	AATAAA	-13	NA	98043587	98032525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98034320_98039164_98039270_98040531_98040692_98043481
Isoform_53387_194	chr15	-	2169	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	0	-1069	0	-8	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAATTTGGCCACTTC	NA	False	NA	-8	True	AATAAA	-13	NA	98043587	98032525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
Isoform_53394_51	chr15	-	2441	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	332.434380418077	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATCTGGATCGATTGT	NA	False	NA	-11	True	ATTAAA	-24	NA	98432145	98416690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426907_98427169_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_53398_3	chr7	+	1539	1	FSM	ENSMUSG00000097530.2	ENSMUST00000181818.2	1461	1	524	-602	524	602	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAGAGAG	NA	False	NA	NA	False	ATTAAA	-17	NA	72323089	72324628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr7_+_72323100_72324600
Isoform_534_170	SIRV1	-	743	3	FSM	SIRV1A	SIRV107	744	3	1	0	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11642	10647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV1_-_10792_10882_11243_11403
Isoform_53404_2256	chr15	-	2419	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	18	1159	-2	3	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98432127	98416697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_53405_519	chr15	-	2454	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	-10	1152	-10	-2	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATCTGGATCGATTGT	NA	False	NA	-11	True	ATTAAA	-24	NA	98432155	98416690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_53413_206	chr15	-	2117	10	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	343.824388135198	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATCTGGATCGATTGT	NA	False	NA	-11	True	ATTAAA	-24	NA	98432157	98416690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
Isoform_53419_132	chr15	-	2304	9	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	351.279247003008	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98432127	98416697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
Isoform_53431_847	chr15	-	2318	10	FSM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	-3	9	-3	3	multi-exon	FALSE	canonical	1	217	junction_2	304.537941847467	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98432128	98416697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_53436_64	chr15	-	2030	10	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-29	-4	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	387.907205398405	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432174	98416692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
Isoform_53438_61	chr15	-	2226	9	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	395.612954003026	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATCTGGATCGATTGT	NA	False	NA	-11	True	ATTAAA	-24	NA	98432144	98416690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
Isoform_53443_138	chr15	-	2569	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_3	398.463749919613	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATCTGGATCGATTGT	NA	False	NA	-11	True	ATTAAA	-24	NA	98432143	98416690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_53448_128	chr15	-	2440	11	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_3	399.718463421444	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98432123	98416697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_53460_266	chr15	-	2262	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-87	0	-43	0	multi-exon	FALSE	canonical	3	20	junction_1	11.1439445440113	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98465604	98441091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
Isoform_53461_27	chr15	-	2358	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-87	-96	-43	96	multi-exon	FALSE	canonical	3	20	junction_1	11.1439445440113	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACATCCCTTATGAAA	NA	False	NA	NA	False	NA	NA	NA	98465604	98440995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
Isoform_53462_7	chr15	-	2095	8	FSM	ENSMUSG00000011960.13	ENSMUST00000168928.8	2011	8	-87	3	-43	-3	multi-exon	FALSE	canonical	3	5	junction_2	14.8681278071516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98465604	98441094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98442490_98444404_98444476_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
Isoform_53464_96	chr15	-	3204	17	FSM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	-14	-3	-9	3	multi-exon	FALSE	canonical	3	15	junction_5	5.44252641243017	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCCCGAGCTCCATT	6985	False	NA	-11	True	AATAAA	-18	NA	98560784	98543011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
Isoform_53467_4	chr15	-	3102	11	FSM	ENSMUSG00000003360.16	ENSMUST00000160506.8	3093	11	-20	11	-10	1	multi-exon	FALSE	canonical	3	15	junction_1	5.71751694356912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGCCGGGCGT	6984	False	NA	NA	False	NA	NA	NA	98560785	98545882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
Isoform_53471_5	chr15	-	2760	2	FSM	ENSMUSG00000003360.16	ENSMUST00000159170.2	610	2	-15	-2135	-10	921	multi-exon	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATTGAAAAAAAAAA	6984	False	NA	NA	False	NA	NA	NA	98560785	98553638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98556317_98560703
Isoform_53472_57	chr15	-	1628	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	3	572	0	-572	multi-exon	FALSE	canonical	3	35	junction_3	4.54835134966506	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGGGGTTTTGTTGT	NA	False	NA	NA	False	AATATA	-12	NA	98575339	98567657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
Isoform_53473_20	chr15	-	721	4	ISM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	609	-4	551	0	3prime_fragment	FALSE	canonical	3	637	junction_3	34.4512538072113	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTATTTTTCACTCGGT	NA	False	NA	NA	False	AATAAA	-19	NA	98625470	98622246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091
Isoform_53474_293	chr15	-	699	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	36	-1	-10	1	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGTATTTTTCACTC	NA	False	NA	NA	False	AATAAA	-16	NA	98626043	98622249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
Isoform_53483_1307	chr15	-	3534	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-1	-993	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCGCAGCCCTTTG	1798	False	NA	-12	True	ATTAAA	-13	NA	98661093	98635507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_98636403_98636442_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
Isoform_53484_157	chr15	-	4747	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	58	-239	58	239	multi-exon	FALSE	canonical	3	612	junction_3	18.4712614620659	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTTGTTGT	1857	False	NA	-1	True	AATAAA	-22	NA	98661034	98634275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
Isoform_53489_57	chr15	-	2041	12	NIC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	87	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	100.554249163292	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9503	False	NA	-4	True	ATTAAA	-22	NA	98729248	98710677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98728767
Isoform_53492_317	chr15	-	1590	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	62	0	-5	0	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9411	False	NA	-4	True	ATTAAA	-22	NA	98729340	98710677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
Isoform_53493_75	chr15	-	1635	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	17	0	-16	0	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9366	False	NA	-4	True	ATTAAA	-22	NA	98729385	98710677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
Isoform_53495_10	chr15	-	1794	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	103.380465568487	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9502	False	NA	-4	True	ATTAAA	-22	NA	98729249	98710677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729015
Isoform_53497_3	chr15	-	3430	2	ISM	ENSMUSG00000023755.11	ENSMUST00000229348.2	1069	8	-87	1	-29	-1	intron_retention	FALSE	canonical	3	177	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGTGTCTGGAGAGAG	NA	False	NA	-23	True	AATAAA	-19	NA	98779244	98775659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_98776179_98776333
Isoform_53499_8	chr15	-	1261	8	FSM	ENSMUSG00000023755.11	ENSMUST00000147015.2	1038	8	44	-267	44	-1	multi-exon	FALSE	canonical	3	19	junction_7	64.8753907620649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGTGTCTGGAGAGAG	NA	False	NA	-23	True	AATAAA	-19	NA	98778927	98775659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98778595
Isoform_535_1515	SIRV1	+	463	3	FSM	SIRV1B	SIRV109	464	3	1	0	1	0	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10712	11643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV1_+_10792_10882_11058_11434
Isoform_53501_118	chr15	-	1153	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	108	0	-38	0	multi-exon	FALSE	canonical	3	165	junction_2	21.3388598283861	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	-22	True	AATAAA	-20	NA	98779253	98775658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
Isoform_53503_3	chr15	-	1254	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	6	1	6	-1	multi-exon	FALSE	canonical	3	165	junction_2	21.3388598283861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGTGTCTGGAGAGAG	NA	False	NA	-23	True	AATAAA	-19	NA	98779355	98775659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
Isoform_53504_4	chr15	-	1104	7	NIC	ENSMUSG00000023755.11	novel	1261	8	NA	NA	-38	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	74.1117774416155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGTGTCTGGAGAGAG	NA	False	NA	-23	True	AATAAA	-19	NA	98779253	98775659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_98776179_98776333_98776416_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
Isoform_53506_117	chr15	-	2169	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	133	2	-43	-2	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTTGTCCCTGTGTCT	NA	False	NA	-5	True	AATAAA	-33	NA	98815979	98801799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
Isoform_53507_136	chr15	-	2116	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	186	2	10	-2	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTTGTCCCTGTGTCT	NA	False	NA	-5	True	AATAAA	-33	NA	98815926	98801799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
Isoform_53508_33	chr15	-	2297	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	4	3	4	1	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCTTGTCCCTGTGTC	NA	False	NA	-6	True	AATAAA	-32	NA	98816108	98801800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
Isoform_53511_4	chr15	-	2247	16	NIC	ENSMUSG00000022999.16	novel	2304	17	NA	NA	-43	1	intron_retention	FALSE	canonical	3	43	junction_8	10.5189775591019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCTTGTCCCTGTGTC	NA	False	NA	-6	True	AATAAA	-32	NA	98815979	98801800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
Isoform_53512_4	chr15	-	2335	15	NIC	ENSMUSG00000022999.16	novel	2304	17	NA	NA	-43	0	intron_retention	FALSE	canonical	3	43	junction_7	10.3275439125334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGAGCTTGTCCCTGTGT	NA	False	NA	-7	True	AATAAA	-31	NA	98815979	98801801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
Isoform_53513_8	chr15	-	2133	13	ISM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	133	2746	-43	-445	5prime_fragment	FALSE	canonical	3	43	junction_5	11.8872013340212	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	98815979	98804543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
Isoform_53520_25640	chr15	-	1608	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	128	7	1	-7	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	25640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTGTTTCTGGAT	159	False	NA	NA	False	AGTAAA	-11	NA	98832318	98829312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
Isoform_53521_1130	chr15	-	1718	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	18	7	18	-7	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTGTTTCTGGAT	49	False	NA	NA	False	AGTAAA	-11	NA	98832428	98829312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
Isoform_53534_4157	chr15	-	1648	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	152	3	152	-3	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	4157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCTTGTGTTCTAT	NA	False	NA	-7	True	AATAAA	-16	NA	98851432	98847720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
Isoform_53535_47	chr15	-	1740	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	60	3	60	-3	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCTTGTGTTCTAT	NA	False	NA	-7	True	AATAAA	-16	NA	98851524	98847720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
Isoform_53540_11	chr15	-	2084	2	FSM	ENSMUSG00000001076.8	ENSMUST00000064462.5	1474	2	-610	0	-610	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGCCTACCTTGG	6299	False	NA	NA	False	AATAAA	-17	NA	98986308	98981966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98982815_98985072
Isoform_53549_52	chr15	-	2010	15	NIC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	227.949611779016	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCTTCTTTTATTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	99149801	99140702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149602
Isoform_53550_2018	chr15	-	1880	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	31	5	-13	4	multi-exon	FALSE	canonical	3	647	junction_2	85.1129201923742	2018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCTTCTTTTATTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	99149811	99140702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
Isoform_53555_222	chr15	-	1787	14	FSM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	-12	-4	-2	4	multi-exon	FALSE	canonical	3	113	junction_13	210.299476515005	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCTTCTTTTATTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	99149838	99140702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
Isoform_53561_50	chr15	-	4389	27	FSM	ENSMUSG00000023008.19	ENSMUST00000088233.13	4423	27	34	0	1	0	multi-exon	FALSE	canonical	3	33	junction_13	7.49447528272084	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGCACCAAGCTGT	NA	False	NA	-17	True	CATAAA	-17	NA	99268329	99215105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
Isoform_53562_52	chr15	-	4309	27	FSM	ENSMUSG00000023008.19	ENSMUST00000088233.13	4423	27	115	-1	82	1	multi-exon	FALSE	canonical	3	33	junction_13	7.49447528272084	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGCACCAAGCTGTC	NA	False	NA	-16	True	CATAAA	-18	NA	99268248	99215104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
Isoform_53563_22	chr15	-	4867	13	FSM	ENSMUSG00000023009.15	ENSMUST00000023747.14	4853	13	-13	-1	-13	1	multi-exon	TRUE	canonical	3	12	junction_6	8.3877390676312	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGGCAGCCCCCC	NA	False	NA	0	True	AATAAA	-26	NA	99355642	99319914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
Isoform_53565_134	chr15	-	1247	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	25	4	3	-2	multi-exon	FALSE	canonical	3	84	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCTGTGTCGTTTCTT	NA	False	NA	-4	True	ATTAAA	-15	NA	99372586	99367963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99368961_99372336
Isoform_53583_44	chr15	-	2895	17	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_15	170.527387371501	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	-2	True	AATAAA	-18	NA	99549514	99518378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540853_99549387
Isoform_53590_58	chr15	-	2882	17	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_16	157.969921484281	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	-2	True	AATAAA	-18	NA	99549491	99518378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540849_99549387
Isoform_53594_254	chr15	-	3030	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	20	2	-11	-1	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	-2	True	AATAAA	-18	NA	99549504	99518378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
Isoform_53596_40	chr15	-	3001	18	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	197.839524637143	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	-2	True	AATAAA	-18	NA	99549504	99518378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541302_99541405_99549387
Isoform_53598_734	chr15	-	2899	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	33	1	-11	-1	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	-2	True	AATAAA	-18	NA	99549504	99518378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
Isoform_536_85	SIRV1	+	701	3	FSM	SIRV1B	SIRV108	702	3	1	0	1	0	multi-exon	FALSE	canonical	3	89	junction_1	13	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10583	11606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV1_+_10792_10897_11188_11403
Isoform_5360_1348	chr10	+	6212	4	FSM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	-17	0	-17	0	multi-exon	FALSE	canonical	3	1052	junction_2	280.358104335628	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4216362	4309470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_4216669_4263742_4263858_4303141_4307940_4308477
Isoform_53600_53	chr15	-	2929	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	3	1	-1	-1	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	-2	True	AATAAA	-18	NA	99549534	99518378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
Isoform_53606_14	chr15	-	2039	11	FSM	ENSMUSG00000023021.16	ENSMUST00000109035.11	2775	11	25	711	25	0	multi-exon	FALSE	canonical	2	12	junction_1	103.150569557322	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670318	99633472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99634318_99635427_99635535_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_53607_16	chr15	-	1910	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-41	0	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670387	99633472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_53608_38	chr15	-	1843	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	25	2	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGTCTCTTTAGTAAC	NA	False	NA	-1	True	ATTAAA	-17	NA	99670318	99633470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_53609_5	chr15	-	1979	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	26	0	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670456	99633472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_53611_7	chr15	-	1879	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	3	0	intron_retention	FALSE	canonical	2	7	junction_9	84.2891847550246	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99669970	99633472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99669768
Isoform_53612_38	chr15	-	2070	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	26	0	26	0	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670456	99633472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_53613_247	chr15	-	1932	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	164	0	25	0	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670318	99633472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_53614_8	chr15	-	2713	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	91	-708	-45	-3	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGCCTTAGTTAATGG	NA	False	NA	NA	False	NA	NA	NA	99670391	99632764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_53616_81	chr15	-	1963	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	133	0	-3	0	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670349	99633472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_53618_7	chr15	-	2154	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	-56	-2	-56	2	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGTCTCTTTAGTAAC	NA	False	NA	-1	True	ATTAAA	-17	NA	99670538	99633470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_5362_60	chr10	+	6345	4	FSM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	-149	-1	-149	1	multi-exon	FALSE	canonical	3	1052	junction_2	280.358104335628	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4216230	4309471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_4216669_4263742_4263858_4303141_4307940_4308477
Isoform_53655_2259	chr15	-	4193	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	50	0	10	0	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	2259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7288	False	NA	-3	True	AATAAA	-15	NA	99773287	99676350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
Isoform_53661_68	chr15	-	4256	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	-13	0	-13	0	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7225	False	NA	-3	True	AATAAA	-15	NA	99773350	99676350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
Isoform_53673_45	chr15	-	2041	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-22	2396	-22	-2396	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTTAGGCTGTGC	NA	False	NA	-1	True	NA	NA	NA	100320905	100292839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
Isoform_53675_64	chr15	-	4317	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	3	95	3	-95	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTTTTCTTTCC	NA	False	NA	-15	True	ATTAAA	-17	NA	100320880	100290538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
Isoform_53676_9	chr15	-	4894	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-14	-465	-14	465	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAACCGAAGTCAC	NA	False	NA	NA	False	AATAAA	-7	NA	100320897	100289978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
Isoform_53683_3	chr15	-	3639	4	NNC	ENSMUSG00000044636.7	novel	4375	5	NA	NA	7301	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.2685791225499	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGTGGGTTCTTTATC	NA	False	NA	0	True	ATTAAA	-15	NA	100386068	100377452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100378484_100378513_100380582_100382330_100382628_100385825
Isoform_53684_3	chr15	-	3797	4	ISM	ENSMUSG00000044636.7	ENSMUST00000061457.7	4375	5	5942	3	5942	-3	3prime_fragment	FALSE	canonical	3	30	junction_3	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTGTGGGTTCTTTAT	NA	False	NA	-1	True	ATTAAA	-14	NA	100387427	100377453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_100380582_100382330_100382628_100385825_100386086_100387315
Isoform_53685_149	chr15	-	4113	6	NNC	ENSMUSG00000044636.7	novel	4375	5	NA	NA	227	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.8621787609308	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTGGGTTCTTTATCT	NA	False	NA	1	True	ATTAAA	-16	NA	100393142	100377451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100378475_100378508_100380582_100382330_100382628_100385825_100386086_100387315_100387548_100392914
Isoform_53686_3	chr15	-	4056	5	FSM	ENSMUSG00000044636.7	ENSMUST00000061457.7	4375	5	316	3	316	-3	multi-exon	FALSE	canonical	3	12	junction_4	9.28372231381357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTGTGGGTTCTTTAT	NA	False	NA	-1	True	ATTAAA	-14	NA	100393053	100377453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100380582_100382330_100382628_100385825_100386086_100387315_100387548_100392914
Isoform_53688_14	chr15	-	3465	15	ISM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	214	51	-5	-2	3prime_fragment	FALSE	canonical	3	68	junction_1	18.1805008799235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTGGTTCTTGTTGC	NA	False	NA	-1	True	AATAAA	-20	NA	100449675	100400678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
Isoform_53689_103	chr15	-	3213	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	39	50	12	-1	multi-exon	FALSE	canonical	3	68	junction_1	18.9415475139235	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449850	100400677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_53690_8	chr15	-	2869	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	8	425	8	-376	multi-exon	FALSE	canonical	3	68	junction_1	18.9415475139235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTATGTTCTGCC	NA	False	NA	NA	False	ATTAAA	-36	NA	100449881	100401052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_53692_6	chr15	-	3103	15	NIC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	2	10	junction_10	28.9275132081581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTTTTGGTTCTTGTT	NA	False	NA	-3	True	AATAAA	-18	NA	100449850	100400680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_53693_3	chr15	-	1671	15	NIC	ENSMUSG00000009733.10	novel	1903	14	NA	NA	9	-16	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	28.3085225502779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATCTTTATGCTTGAA	NA	False	NA	NA	False	ATTAAA	-24	NA	100449880	100407428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_100407556_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_53694_126	chr15	-	3650	2	FSM	ENSMUSG00000009739.18	ENSMUST00000177335.2	3654	2	7	-3	7	0	multi-exon	FALSE	canonical	3	66	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	8513	False	NA	0	True	AATAAA	-21	NA	100478105	100473198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100476500_100477756
Isoform_53695_78	chr15	-	3684	2	FSM	ENSMUSG00000009739.18	ENSMUST00000177335.2	3654	2	-27	-3	-27	0	multi-exon	FALSE	canonical	3	66	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	8479	False	NA	0	True	AATAAA	-21	NA	100478139	100473198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100476500_100477756
Isoform_53698_9	chr15	-	5051	11	NIC	ENSMUSG00000009739.18	novel	4953	11	NA	NA	-94	-1	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	17.0833252032501	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCTGCCTATTTTGTT	NA	False	NA	-1	True	AATAAA	-20	NA	100497959	100473199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100481911_100482041_100483755_100484010_100484524_100484654_100485669_100485792_100489721_100489915_100491853_100491947_100497643
Isoform_53702_11	chr15	-	877	4	FSM	ENSMUSG00000053559.14	ENSMUST00000229965.2	586	4	-12	-279	-12	2	multi-exon	FALSE	canonical	3	57	junction_1	287.836759292485	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCATTTTCAAGAACTAA	NA	False	NA	-5	True	ATTAAA	-16	NA	100534757	100519240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100519840_100520509_100520591_100534067_100534137_100534629
Isoform_53706_215	chr15	-	1045	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	86	4	-78	-4	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCCTTGTTCTGC	NA	False	NA	12	True	ATTAAA	-33	NA	100534650	100519223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
Isoform_53708_67	chr15	-	1147	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	-20	8	-11	-8	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAAATTTTTCCTTGTT	NA	False	NA	8	True	ATTAAA	-29	NA	100534756	100519227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
Isoform_53710_70	chr15	-	1345	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	-336	-89	-336	2	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCATTTTCAAGAACTAA	NA	False	NA	-5	True	ATTAAA	-16	NA	100535157	100519240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
Isoform_53711_106	chr15	-	1054	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	-28	-106	-28	-4	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCCTTGTTCTGC	NA	False	NA	12	True	ATTAAA	-33	NA	100534849	100519223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
Isoform_53713_136	chr15	-	982	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	64	-126	-12	16	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCTTTTTACATCATTT	NA	False	NA	-1	True	ACTAAA	-17	NA	100534757	100519203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
Isoform_53714_20	chr15	-	1401	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	-376	-105	-376	-5	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTTTTCCTTGTTCTG	NA	False	NA	11	True	ATTAAA	-32	NA	100535197	100519224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
Isoform_53720_10	chr15	-	1989	12	NNC	ENSMUSG00000098112.9	novel	2036	11	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	54.1451981189361	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGGTGTCTTGCCCTGA	NA	False	NA	-6	True	AATAAA	-16	NA	100567434	100538964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100539184_100539220_100539446_100542693_100543418_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
Isoform_53721_3	chr15	-	1831	11	NNC	ENSMUSG00000098112.9	novel	2036	11	NA	NA	6925	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.4696602142572	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGAGGTGTCTTGCCCTG	NA	False	NA	-7	True	AATAAA	-15	NA	100560461	100538965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100539184_100539222_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397
Isoform_53722_191	chr15	-	1961	12	NNC	ENSMUSG00000098112.9	novel	2036	11	NA	NA	3	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.499419626636	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTTGCCCTGAACAG	NA	False	NA	-2	True	AATAAA	-20	NA	100567403	100538960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100539184_100539224_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
Isoform_53724_9	chr15	-	1092	6	ISM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	2551	1	-6	0	3prime_fragment	FALSE	canonical	2	9	junction_4	10.6695829346793	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGCTTGCATTTATAA	8436	False	NA	1	True	AATAAA	-19	NA	100583251	100572302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014
Isoform_53725_3	chr15	-	799	5	NNC	ENSMUSG00000023031.9	novel	456	4	NA	NA	-67	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	13.4420050587701	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATACTGTGTGCTTGCATT	5887	False	NA	-4	True	AATAAA	-14	NA	100581067	100572307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580847_100580934
Isoform_53726_7	chr15	-	724	4	FSM	ENSMUSG00000023031.9	ENSMUST00000229235.2	456	4	-67	-201	-67	-1	multi-exon	FALSE	canonical	3	11	junction_3	10.8730042868667	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGCTTGCATTTATA	5887	False	NA	0	True	AATAAA	-18	NA	100581067	100572303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580934
Isoform_53728_18	chr15	-	3816	11	ISM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	153	-1052	153	1	3prime_fragment	FALSE	canonical	3	77	junction_7	8.59127464349732	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTTGGATTTGAGTTC	1827	False	NA	-6	True	AATAAA	-20	NA	100618205	100589692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895
Isoform_5373_245	chr10	+	5953	3	FSM	ENSMUSG00000038587.11	ENSMUST00000239373.2	5956	3	1	2	1	-2	multi-exon	FALSE	canonical	3	114	junction_1	774.5	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	4284545	4309468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_4284710_4303141_4307940_4308477
Isoform_53730_220	chr15	-	3844	12	FSM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	-46	-1052	-46	1	multi-exon	FALSE	canonical	3	77	junction_7	8.71021059418435	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTTGGATTTGAGTTC	1628	False	NA	-6	True	AATAAA	-20	NA	100618404	100589692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
Isoform_53731_9	chr15	-	3786	12	FSM	ENSMUSG00000037280.13	ENSMUST00000052069.12	3798	12	13	-1	13	-1	multi-exon	FALSE	canonical	2	3	junction_11	26.1268362081583	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATGTTGGATTTGAGT	9888	False	NA	-8	True	AATAAA	-18	NA	100627244	100589694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100627183
Isoform_53733_5	chr15	-	2844	8	FSM	ENSMUSG00000037185.10	ENSMUST00000230909.2	2811	8	-32	-1	-32	1	multi-exon	FALSE	canonical	1	1	junction_1	2.05038572777248	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATAATGTTGCTGTGCAC	8255	False	NA	NA	False	AATAAA	-18	NA	101262491	101246202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_101247921_101248049_101248106_101248876_101249098_101249554_101249681_101250057_101250223_101256527_101256624_101257360_101257422_101262090
Isoform_53735_4	chr15	-	2112	9	FSM	ENSMUSG00000061397.9	ENSMUST00000023799.8	2097	9	-19	4	-19	-4	multi-exon	FALSE	canonical	0	0	junction_1	0.992156741649222	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTGTGTGTGACTCCA	3204	False	NA	NA	False	AATAAA	-16	NA	101848778	101837770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_101838364_101838602_101838638_101839112_101839334_101839859_101839986_101840186_101840352_101844539_101844636_101844735_101844797_101846260_101846479_101848181
Isoform_53736_7	chr15	-	1969	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	-19	8	-19	-8	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCTATGTATGCATTC	5873	False	NA	-2	True	AATAAA	-24	NA	101912936	101905140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
Isoform_53737_83	chr15	-	1800	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	148	10	148	-10	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTGCTATGTATGCAT	6040	False	NA	-4	True	AATAAA	-22	NA	101912769	101905142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
Isoform_53740_559	chr15	-	2428	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	30	-2	-12	2	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGAAGGGGAATCCTTCC	NA	False	NA	-3	True	AATAAA	-28	NA	102044639	102024960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
Isoform_53741_31	chr15	-	2642	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	-3	-183	-3	183	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGACCCCACTCTGG	NA	False	NA	NA	False	AATAGA	-18	NA	102044672	102024779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
Isoform_53751_28	chr15	-	2612	18	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	39.6618928436936	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	6656	False	NA	NA	False	AATAAA	-17	NA	102112304	102085433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
Isoform_53754_7	chr15	-	2564	18	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	36.7303839792948	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6262	False	NA	NA	False	AATAAA	-18	NA	102112698	102085432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112573
Isoform_53756_4	chr15	-	2162	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	29.4138289471693	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAGAAAA	7088	False	NA	NA	False	NA	NA	NA	102111872	102085755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571
Isoform_53758_16	chr15	-	2179	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	39.7570257155889	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	6639	False	NA	NA	False	NA	NA	NA	102112321	102085752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571_102111696_102112130
Isoform_53759_15	chr15	-	2497	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	39.7570257155889	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	6640	False	NA	NA	False	AATAAA	-17	NA	102112320	102085433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571_102111696_102112130
Isoform_53761_61	chr15	-	2370	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	33.4241429708128	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6639	False	NA	NA	False	AATAAA	-13	NA	102112321	102085437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
Isoform_53763_12	chr15	-	2012	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-30	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	28.5420547418873	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	6239	False	NA	NA	False	NA	NA	NA	102112721	102085752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112573
Isoform_53764_24	chr15	-	2294	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	28.5420547418873	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6272	False	NA	NA	False	AATAAA	-13	NA	102112688	102085437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112573
Isoform_53769_18	chr15	-	2277	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	24	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	34.0377941202339	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6656	False	NA	NA	False	AATAAA	-13	NA	102112304	102085437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112130
Isoform_53770_7	chr15	-	1986	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	34.0377941202339	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	6632	False	NA	NA	False	NA	NA	NA	102112328	102085752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112130
Isoform_53771_4	chr15	-	1910	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_14	33.5556193779333	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAGAAAA	6262	False	NA	NA	False	NA	NA	NA	102112698	102085755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112573
Isoform_53772_7	chr15	-	2206	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_14	33.5556193779333	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6284	False	NA	NA	False	AATAAA	-13	NA	102112676	102085437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112573
Isoform_53775_9	chr15	-	1921	2	NIC	ENSMUSG00000023044.3	novel	593	5	NA	NA	263	1	intron_retention	FALSE	canonical	3	143	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102088033	102085752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102087596_102087955
Isoform_53777_4	chr15	-	2168	3	NIC	ENSMUSG00000023044.3	novel	772	9	NA	NA	-355	-2	intron_retention	FALSE	canonical	3	13	junction_2	65	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	102088651	102085755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102087596_102087955_102088038_102088405
Isoform_53779_8	chr15	-	2270	12	ISM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	7385	0	7349	0	intron_retention	FALSE	canonical	3	39	junction_10	5.51781487472492	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCCTCTACTTTACT	3233	False	NA	-1	True	AATAAA	-14	NA	102132994	102124429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736
Isoform_53782_3	chr15	-	2712	16	NIC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	16.3062360259299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGAGCCTCTACTTTA	NA	False	NA	-3	True	AATAAA	-12	NA	102140341	102124431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140045_102140115_102140285
Isoform_53783_136	chr15	-	2646	15	FSM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	38	-1	2	1	multi-exon	FALSE	canonical	3	29	junction_13	6.6719791758105	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCCTCTACTTTACTT	NA	False	NA	0	True	AATAAA	-15	NA	102140341	102124428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
Isoform_53784_15	chr15	-	2440	14	NIC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	12.7794213275663	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGCCTCTACTTTAC	NA	False	NA	-2	True	AATAAA	-13	NA	102140341	102124430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102140285
Isoform_53786_7	chr15	-	2484	14	NIC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	12.5302002042969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCCTCTACTTTACT	NA	False	NA	-1	True	AATAAA	-14	NA	102140341	102124429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102124703_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
Isoform_53787_8	chr15	-	2386	8	NIC	ENSMUSG00000001288.16	novel	2718	8	NA	NA	269	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	24.6344706226284	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGGTGTGGATCCCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	102151755	102143373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102151647
Isoform_53788_99	chr15	-	2690	8	FSM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	29	-1	29	-1	multi-exon	FALSE	canonical	3	57	junction_4	9.19183310979738	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGGTGTGGATCCCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	102154906	102143373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
Isoform_53794_7	chr15	-	2889	10	FSM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	63	1	63	-1	multi-exon	FALSE	canonical	1	1	junction_9	31.3049516849971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGGTGTGGATCCCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	102165889	102143373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102164904_102164975_102165674
Isoform_53795_4	chr15	-	3025	10	FSM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	-73	1	-73	-1	multi-exon	FALSE	canonical	1	1	junction_9	31.3049516849971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGGTGTGGATCCCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	102166025	102143373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102164904_102164975_102165674
Isoform_53797_3	chr15	-	2844	10	NNC	ENSMUSG00000001288.16	novel	2953	10	NA	NA	-63	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	30.6416967586149	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGGTGTGGATCCCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	102165847	102143373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102164904_102164972_102165674
Isoform_53799_22	chr15	-	2136	15	ISM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	86	4	14	0	intron_retention	FALSE	canonical	3	447	junction_7	34.6472014949053	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259108	102246690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387
Isoform_53802_128	chr15	-	1790	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	17	4	4	0	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259177	102246690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
Isoform_53803_788	chr15	-	1722	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	85	4	13	0	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259109	102246690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
Isoform_53811_21	chr15	-	3760	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	7	-419	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	18.6906351885108	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGAGGGTTTTCTTGG	NA	False	NA	-1	True	AATATA	-20	NA	102419128	102407878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
Isoform_53814_57	chr15	-	3600	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	31	-419	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	14.0437411919569	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGAGGGTTTTCTTGG	NA	False	NA	-1	True	AATATA	-20	NA	102419104	102407878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
Isoform_53816_5	chr15	-	3707	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	-4	-347	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	14.0437411919569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGAATTTGGACAAGT	NA	False	NA	71	True	AATACA	-28	NA	102419139	102407806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
Isoform_53817_4	chr15	-	3545	16	FSM	ENSMUSG00000023050.10	ENSMUST00000169377.8	4210	16	245	420	-3	-420	multi-exon	FALSE	canonical	2	4	junction_15	20.3004105048806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102425254	102407879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102425222
Isoform_53818_3	chr15	-	3700	16	FSM	ENSMUSG00000023050.10	ENSMUST00000169377.8	4210	16	88	422	-1	-422	multi-exon	FALSE	canonical	2	4	junction_15	20.3004105048806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGTCGAGGGTTTTCT	NA	False	NA	-4	True	AATATA	-17	NA	102425411	102407881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102425222
Isoform_53819_18	chr15	-	3642	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	8	668	8	-419	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGAGGGTTTTCTTGG	NA	False	NA	-1	True	AATATA	-20	NA	102419127	102407878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
Isoform_53820_4	chr15	-	3719	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	3	596	3	-347	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGAATTTGGACAAGT	NA	False	NA	71	True	AATACA	-28	NA	102419132	102407806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
Isoform_53822_13	chr15	-	3439	14	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	16	-419	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	20.1934431915163	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGAGGGTTTTCTTGG	NA	False	NA	-1	True	AATATA	-20	NA	102419119	102407878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102419018
Isoform_53826_3	chr15	-	3781	15	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	28	-419	intron_retention	FALSE	canonical	3	33	junction_12	14.4901444338656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGAGGGTTTTCTTGG	NA	False	NA	-1	True	AATATA	-20	NA	102419107	102407878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
Isoform_53828_19	chr15	-	2152	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184485.8	2523	12	367	4	1	-4	multi-exon	FALSE	canonical	3	29	junction_11	8.85605736578731	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	102533507	102442010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
Isoform_53829_17	chr15	-	7099	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184485.8	2523	12	356	-4932	5	-4	multi-exon	TRUE	canonical	3	29	junction_11	8.85605736578731	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGGTATGTTTGGTGC	NA	False	NA	-5	True	ATTAAA	-12	NA	102533518	102437074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
Isoform_53830_3	chr15	-	2544	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184485.8	2523	12	-26	5	-1	-5	multi-exon	FALSE	canonical	3	29	junction_11	8.85605736578731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	102533900	102442011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
Isoform_53831_18	chr15	-	2252	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	-14	4909	0	27	multi-exon	FALSE	canonical	3	22	junction_11	10.1696355688543	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTTTGAATCATTTTT	NA	False	NA	NA	False	AAAAAG	-9	NA	102533899	102441979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533796
Isoform_53833_8	chr15	-	7157	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	-15	5	-1	-5	multi-exon	FALSE	canonical	3	22	junction_11	10.1696355688543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGGTATGTTTGGTG	NA	False	NA	-6	True	ATTAAA	-11	NA	102533900	102437075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533796
Isoform_53838_837	chr17	-	651	1	FSM	ENSMUSG00000068120.5	ENSMUST00000181584.2	441	1	-60	-150	-60	150	mono-exon	FALSE	NA	NA	NA	NA	NA	837	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	5866975	5866324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_5866300_5867000
Isoform_53839_298	chr15	-	683	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	48	0	48	0	multi-exon	FALSE	canonical	3	3206	junction_4	667.870870752723	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3949	False	NA	-11	True	AATAAA	-17	NA	102579514	102571298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
Isoform_53845_243	chr15	-	2730	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	93	1	46	-1	multi-exon	FALSE	canonical	3	88	junction_14	14.2851785613836	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGTCATGACGTATGT	NA	False	NA	-7	True	AATATA	-18	NA	102630520	102615212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
Isoform_53847_3	chr15	-	3579	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	84	-839	37	839	multi-exon	FALSE	canonical	3	88	junction_14	14.2851785613836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCCCTCTCTTCCTTTA	NA	False	NA	NA	False	AATGAA	-29	NA	102630529	102614372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
Isoform_53848_9	chr15	-	2928	14	FSM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	46	-6	46	6	multi-exon	FALSE	canonical	3	88	junction_13	14.4115338424578	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTCTGTCTTTCCTC	NA	False	NA	NA	False	AATAAA	-23	NA	102630520	102616013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
Isoform_53850_194	chr15	-	3323	4	ISM	ENSMUSG00000036061.11	ENSMUST00000229371.2	3882	7	3783	0	9	0	3prime_fragment	TRUE	canonical	3	65	junction_3	17.3781471969828	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTGCAAATTACT	NA	False	NA	-1	True	NA	NA	NA	103071736	103061716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_103064629_103066043_103066346_103066583_103066655_103071698
Isoform_53851_68	chr15	-	3248	3	FSM	ENSMUSG00000036061.11	ENSMUST00000231198.2	491	3	9	-2766	9	-4	multi-exon	FALSE	canonical	3	15	junction_2	46	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTGTTTTGCAAAT	NA	False	NA	-5	True	NA	NA	NA	103071736	103061720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103064629_103066043_103066346_103071698
Isoform_53853_25	chr15	-	3351	4	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	37.6061460697879	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTGTTTTGCAAAT	NA	False	NA	-5	True	NA	NA	NA	103071737	103061720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_103064629_103066043_103066346_103066552_103066655_103071698
Isoform_53854_10	chr15	-	3284	4	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	8	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	47.3028070578856	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTGCAAATTACT	NA	False	NA	-1	True	NA	NA	NA	103071737	103061716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_103064629_103066043_103066346_103066552_103066584_103071698
Isoform_53862_17	chr15	-	8926	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-25	-2	combination_of_known_splicesites	FALSE	canonical	3	31	junction_5	201.842512865848	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103148268	103099972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103148159
Isoform_53865_8	chr15	-	8919	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-14	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	209.116809463037	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103148257	103099972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123553_103148159
Isoform_53873_243	chr15	-	8831	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-30	2	-30	-2	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103148273	103099972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
Isoform_53874_8	chr15	-	3110	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-53	5746	-53	-603	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAATGCCTTGTAATGC	NA	False	NA	NA	False	NA	NA	NA	103148296	103105716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
Isoform_53875_27	chr15	-	1490	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-61	7374	-61	337	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTAAGCTGTAGTGCA	NA	False	NA	0	True	ATTAAA	-19	NA	103148304	103107344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
Isoform_53882_8	chr15	-	1697	3	FSM	ENSMUSG00000058794.13	ENSMUST00000075192.13	1697	3	-7	7	-7	1	multi-exon	FALSE	canonical	0	0	junction_2	8	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCTTTCTATTGTGTCT	4164	False	NA	NA	False	CATAAA	-13	NA	103163873	103156645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103157876_103159355_103159526_103163576
Isoform_53883_152	chr15	-	2243	7	FSM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	-9	-13	-9	0	multi-exon	FALSE	canonical	3	115	junction_6	27.1456974286698	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	8807	False	NA	-12	True	AATAAA	-24	NA	103231946	103222321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103231817
Isoform_53884_63	chr15	-	2265	7	FSM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	-31	-13	-31	0	multi-exon	FALSE	canonical	3	115	junction_6	27.1456974286698	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	8785	False	NA	-12	True	AATAAA	-24	NA	103231968	103222321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103231817
Isoform_53886_32	chr15	-	2324	8	FSM	ENSMUSG00000000552.11	ENSMUST00000168828.3	2298	8	-26	0	-26	0	multi-exon	FALSE	canonical	3	18	junction_6	68.2405708519799	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	6893	False	NA	-12	True	AATAAA	-24	NA	103248546	103222321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103241491_103241629_103248473
Isoform_53895_303	chr15	-	4208	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	169	5	154	-5	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTTGCAGTCTGTCCT	NA	False	NA	-3	True	AATAAA	-23	NA	103275021	103252717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
Isoform_53896_78	chr15	-	4403	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	-26	5	-26	-5	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTTGCAGTCTGTCCT	NA	False	NA	-3	True	AATAAA	-23	NA	103275216	103252717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
Isoform_53901_5	chr15	-	869	9	FSM	ENSMUSG00000022487.15	ENSMUST00000153930.8	799	9	-50	-20	10	-2	multi-exon	FALSE	canonical	3	33	junction_8	29.634228520412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTGGCAAGTACTTTT	8433	False	NA	-4	True	AGTAAA	-14	NA	103338826	103310889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603
Isoform_53902_18	chr15	-	784	10	FSM	ENSMUSG00000022487.15	ENSMUST00000141364.8	700	10	-30	-54	0	1	multi-exon	FALSE	canonical	3	29	junction_9	37.8499310957182	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCAAGTACTTTTTTT	8423	False	NA	-1	True	AGTAAA	-17	NA	103338836	103310886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603_103338685_103338782
Isoform_53903_43	chr15	-	703	9	FSM	ENSMUSG00000022487.15	ENSMUST00000023129.15	819	9	61	55	0	1	multi-exon	FALSE	canonical	3	70	junction_8	17.7019596372831	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCAAGTACTTTTTTT	8423	False	NA	-1	True	AGTAAA	-17	NA	103338836	103310886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338782
Isoform_53904_3	chr15	-	670	8	NIC	ENSMUSG00000022487.15	novel	819	9	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	42.0432236283236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCAAGTACTTTTTTT	8411	False	NA	-1	True	AGTAAA	-17	NA	103338848	103310886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103338782
Isoform_53905_7	chr15	-	614	8	NIC	ENSMUSG00000022487.15	novel	819	9	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	42.4446818860521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCAAGTACTTTTTTT	8411	False	NA	-1	True	AGTAAA	-17	NA	103338848	103310886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103336766_103336812_103338782
Isoform_53906_95	chr15	-	747	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	-2	561	-2	-146	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGCTTTTCTTCTTTC	2050	False	NA	-38	True	GATAAA	-15	NA	103446432	103439266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
Isoform_53909_12	chr15	-	1306	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	-1	1	-1	-1	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTTTCACCCCCTTTT	2051	False	NA	NA	False	ATTAAA	-20	NA	103446431	103438706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
Isoform_53911_5	chr15	-	861	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	-116	561	-116	-146	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGCTTTTCTTCTTTC	1936	False	NA	-38	True	GATAAA	-15	NA	103446546	103439266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
Isoform_53912_17	chr15	-	933	4	Intergenic	novelGene_3957	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCTAATCTGGCCTA	NA	False	NA	-1	True	NA	NA	NA	75754362	75741422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
Isoform_53913_15	chr15	-	1160	4	Intergenic	novelGene_3956	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGGT	NA	False	NA	NA	False	NA	NA	NA	75754362	75741195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
Isoform_53916_56	chr15	-	2859	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-15	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	53.8380244062904	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTAGGGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	100320898	100285781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100286319_100286443_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
Isoform_53917_6	chr15	-	3454	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	1	-2	intron_retention	FALSE	canonical	3	14	junction_1	28.0985873709854	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTGGTTCTTGTTGC	NA	False	NA	-1	True	AATAAA	-20	NA	100449667	100400678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
Isoform_53918_24	chr15	-	3211	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	27.8291613639761	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	1	True	AATAAA	-22	NA	100449850	100400676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_53919_4	chr15	-	2860	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	-13	-376	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	27.8291613639761	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTATGTTCTGCC	NA	False	NA	NA	False	ATTAAA	-36	NA	100449875	100401052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_53920_3	chr15	-	3128	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	34.8223626248351	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTGGTTCTTGTTGC	NA	False	NA	-1	True	AATAAA	-20	NA	100449876	100400678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_53921_3	chr15	-	2475	2	Intergenic	novelGene_3899	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCACAAATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	57840484	57837908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_57839652_57839752
Isoform_53922_10	chr15	-	1997	2	Intergenic	novelGene_3901	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCACAAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	57840007	57837909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_57839652_57839752
Isoform_53923_9	chr15	-	2198	3	Intergenic	novelGene_3900	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCACAAATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	57840484	57837908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_57839652_57839752_57840113_57840389
Isoform_53924_6	chr15	-	2170	3	Intergenic	novelGene_3897	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTTATTTTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	57840677	57837900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_57839652_57839752_57840113_57840618
Isoform_53925_3	chr15	-	2139	3	Intergenic	novelGene_3902	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAACCACAAATTTATT	NA	False	NA	NA	False	NA	NA	NA	57841250	57837910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_57839652_57839752_57840113_57841212
Isoform_53926_30	chr15	-	1307	3	Antisense	novelGene_ENSMUSG00000037386.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	116	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	2129	False	NA	NA	False	NA	NA	NA	39110541	39105323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_39106174_39108258_39108492_39110317
Isoform_53927_3	chr15	-	2302	2	Intergenic	novelGene_3898	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACAAATTTATTTTATT	NA	False	NA	NA	False	NA	NA	NA	57840484	57837905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_57840113_57840389
Isoform_53928_20	chr15	-	1871	4	NNC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-28	238	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	36.3807030657127	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGGATCGATCATCAG	NA	False	NA	-8	True	AATAAA	-22	NA	82097044	82091156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_82091792_82091951_82092099_82092663_82092798_82096089
Isoform_53933_11	chr15	-	1874	4	NNC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-25	241	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	33.5592345297419	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATCGATCATCAGTCA	NA	False	NA	-5	True	AATAAA	-25	NA	82097041	82091153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_82091795_82091951_82092099_82092663_82092798_82096089
Isoform_53935_3	chr15	-	1167	3	Intergenic	novelGene_3855	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGAGTTCACTCAG	NA	False	NA	NA	False	TTTAAA	-16	NA	39640726	39633464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_39634502_39640471_39640539_39640663
Isoform_53937_7	chr15	-	1017	5	NNC	ENSMUSG00000005360.15	novel	964	3	NA	NA	-4	-14904	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.9953699733862	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGAGTGCCTCTTCT	NA	False	NA	NA	False	AATAAA	-32	NA	8739969	8686643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_8686996_8717194_8717297_8717771_8717910_8738045_8738324_8739822
Isoform_53938_10	chr15	-	622	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGAGTTTGTGGGGTTT	NA	False	NA	NA	False	AATAAA	-35	NA	102840052	102837216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_102837498_102839711
Isoform_53943_4	chr15	-	1644	6	NNC	ENSMUSG00000033356.4	novel	2840	9	NA	NA	1	6699	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16.7092788593643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTACGTAGGTTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	94441373	94427340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_94427578_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
Isoform_53944_3	chr15	-	968	3	Intergenic	novelGene_3850	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCTTTTTAAGACATG	NA	False	NA	NA	False	ATTAAA	-15	NA	38366307	38357574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_38358314_38358399_38358471_38366149
Isoform_53945_5	chr15	-	1101	6	NNC	ENSMUSG00000011960.13	novel	2015	3	NA	NA	-57	-2484	intron_retention	FALSE	canonical	3	14	junction_1	12.5123938556936	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTTTGAATTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	98465618	98449016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_98449521_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
Isoform_53946_4	chr15	-	769	2	Intergenic	novelGene_3914	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTCTCCAGTCATTCA	5629	False	NA	NA	False	AATAAA	-12	NA	59519952	59519033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_59519653_59519802
Isoform_53947_5	chr15	-	1302	7	NNC	ENSMUSG00000016637.8	novel	375	5	NA	NA	3	-1607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.423788716719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTGTGTACCTGTAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	78058304	78045269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_78045808_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
Isoform_53948_3	chr15	-	1861	7	NNC	ENSMUSG00000016637.8	novel	375	5	NA	NA	-4	1202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.973145143218	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGTTGAGTGCTCCGT	NA	False	NA	NA	False	CATAAA	-15	NA	78058311	78046809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_-_78047900_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
Isoform_53949_5	chr15	-	483	2	Intergenic	novelGene_4079	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTGTCCATCACCTCC	NA	False	NA	NA	False	ATTAAA	-22	NA	82102310	82099499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_82099935_82102262
Isoform_53952_11	chr15	+	2010	5	FSM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	75	0	-2	0	multi-exon	FALSE	canonical	2	6	junction_1	1.78535710713571	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTCTTTATTGT	9352	False	NA	14	True	AATAAA	-19	NA	3300477	3309989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_3300535_3304142_3304359_3305048_3305262_3306638_3306757_3308583
Isoform_53958_284	chr15	+	3236	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	289	2	-12	-2	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAATGTGTGTGTCCTCT	NA	False	NA	14	True	AATAAA	-18	NA	4056153	4184824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_53960_65	chr15	+	3266	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	259	2	-42	-2	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAATGTGTGTGTCCTCT	NA	False	NA	14	True	AATAAA	-18	NA	4056123	4184824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_53962_25	chr15	+	3455	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	72	0	72	0	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	False	NA	16	True	AATAAA	-20	NA	4055936	4184826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_53963_42	chr15	+	3347	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	180	0	-121	0	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	False	NA	16	True	AATAAA	-20	NA	4056044	4184826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_53972_2492	chr15	+	369	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	0	466	0	-1	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	2492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGTGGTGATCTAA	2248	False	NA	33	True	AATAAA	-14	NA	5146126	5148156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
Isoform_53974_781	chr15	+	396	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	-27	466	-27	-1	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGTGGTGATCTAA	2221	False	NA	33	True	AATAAA	-14	NA	5146099	5148156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
Isoform_53976_40	chr15	+	581	4	FSM	ENSMUSG00000041841.9	ENSMUST00000227463.2	556	4	-26	1	-19	-1	multi-exon	FALSE	canonical	3	713	junction_1	9620.00361515294	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGTGGTGATCTAA	2278	False	NA	33	True	AATAAA	-14	NA	5146156	5148156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5146409_5146768_5146905_5147100_5147186_5148048
Isoform_53982_55	chr15	+	4626	9	FSM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	-8	0	-8	0	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACACAGTATTTCTT	NA	False	NA	11	True	AATAAA	-20	NA	5173364	5211373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
Isoform_53983_66	chr15	+	4258	9	FSM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	-8	368	-8	-368	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCTATTTTTTTCT	NA	False	NA	3	True	AATAAA	-15	NA	5173364	5211005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
Isoform_53987_4	chr15	+	1849	9	FSM	ENSMUSG00000050697.10	ENSMUST00000051186.9	4655	9	-156	2962	-156	-2955	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGCTTATTTCTTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	5173186	5208418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
Isoform_53989_3	chr15	+	4804	9	FSM	ENSMUSG00000050697.10	ENSMUST00000051186.9	4655	9	-156	7	-156	0	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACACAGTATTTCTT	NA	False	NA	11	True	AATAAA	-20	NA	5173186	5211373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
Isoform_53991_16	chr15	+	4532	8	NIC	ENSMUSG00000050697.10	novel	4618	9	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACACAGTATTTCTT	NA	False	NA	11	True	AATAAA	-20	NA	5173364	5211373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
Isoform_53994_48	chr15	+	1633	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	23	15	-12	-15	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTGGTCAAAAAAGTTTC	NA	False	NA	16	True	AGTAAA	-16	NA	5215028	5247802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_53995_30	chr15	+	3621	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	23	-1973	-12	1973	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTGTTGTTCTGGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	5215028	5249790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_53997_22	chr15	+	3638	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	168	-1974	1	1974	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTTGTTCTGGTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	5215208	5249791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_53998_30	chr15	+	1659	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	159	14	-8	-14	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGTCAAAAAAGTTTCT	NA	False	NA	17	True	AGTAAA	-17	NA	5215199	5247803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_53999_14	chr15	+	1824	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	-6	14	-6	-14	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGTCAAAAAAGTTTCT	NA	False	NA	17	True	AGTAAA	-17	NA	5215034	5247803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_54_416	ERCC-00042	+	1005	1	FSM	ERCC-00042A	DQ516783	1007	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	AAAACA	-4	NA	1	1006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00042_+_0_1000
Isoform_54000_8	chr15	+	3811	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	-6	-1973	-6	1973	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTGTTGTTCTGGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	5215034	5249790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_54004_4	chr15	+	3469	15	FSM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	119	1075	-31	2	multi-exon	FALSE	canonical	2	3	junction_9	4.17230910471721	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGTGATCTCTCCCAG	8233	False	NA	NA	False	AATAAA	-15	NA	6416197	6469111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
Isoform_54005_3	chr15	+	751	7	FSM	ENSMUSG00000050310.10	ENSMUST00000226201.2	2633	7	0	1882	0	-1882	multi-exon	FALSE	canonical	3	76	junction_1	4.31083905212585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTAGAAATTATGTTG	NA	False	NA	NA	False	NA	NA	NA	6737861	6786214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941
Isoform_54006_10	chr15	+	9308	38	FSM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	1	3	1	-3	multi-exon	FALSE	canonical	3	15	junction_28	25.9902212323754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGGTGGTGTTGAC	NA	False	NA	3	True	AATAAA	-18	NA	6737864	6829879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
Isoform_54007_3	chr15	+	9380	39	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	1	-5	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_31	27.7495227180637	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAACTTGTGGTGGTGTTG	NA	False	NA	1	True	AATAAA	-16	NA	6737862	6829877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6817130_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
Isoform_54008_11	chr15	+	2701	16	NIC	ENSMUSG00000054263.13	novel	2844	17	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	8.17964954424495	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCATACATGCGGCA	NA	False	NA	NA	False	NA	NA	NA	7159049	7214816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7214547
Isoform_54009_6	chr15	+	4138	20	FSM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	7	-2	-1	2	multi-exon	FALSE	canonical	3	17	junction_15	6.67529450936089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGTTATCAAACAGTTG	NA	False	NA	NA	False	GATAAA	-27	NA	7159046	7221226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
Isoform_54011_3	chr15	+	9890	20	FSM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	-8	-5739	-8	-7	multi-exon	FALSE	canonical	3	17	junction_15	6.67529450936089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCTAGTAAATTTGGACA	NA	False	NA	NA	False	AATAAA	-18	NA	7159031	7226963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
Isoform_54015_326	chr15	+	4312	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	99	3421	36	790	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCAGGTGTTGTATATC	NA	False	NA	14	True	AATAAA	-17	NA	8138855	8187310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
Isoform_54017_123	chr15	+	6384	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	58	1390	-5	1033	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTAGTTGTGTTTCCATT	NA	False	NA	10	True	AATGAA	-20	NA	8138814	8189341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
Isoform_54019_13	chr15	+	7478	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	30	324	30	-324	multi-exon	TRUE	canonical	3	205	junction_4	36.1069753346922	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGAGTTTTTTGAAAG	NA	False	NA	2	True	AATAAA	-15	NA	8138786	8190407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
Isoform_54040_244	chr15	+	3230	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	180	725	-135	306	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTCTTATTTCCT	87	False	NA	2	True	AATAAA	-22	NA	9071519	9110254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
Isoform_54045_26	chr15	+	3533	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	190	412	-125	-412	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTATATTCACTTGAGT	97	False	NA	NA	False	AGTAAA	-8	NA	9071529	9110567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
Isoform_54047_323	chr15	+	3335	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	8	305	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTTTTCTTATTTCC	14	False	NA	1	True	AATAAA	-21	NA	9071347	9110253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
Isoform_54051_38	chr15	+	3507	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	150	-412	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTATATTCACTTGAGT	57	False	NA	NA	False	AGTAAA	-8	NA	9071489	9110567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
Isoform_54068_21	chr15	+	8049	19	NNC	ENSMUSG00000039704.9	novel	8098	18	NA	NA	16	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	8.41295297608264	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGTCTTGTTGATTA	48	False	NA	4	True	AATAAA	-14	NA	9140652	9202562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742_9200496_9200521
Isoform_54070_3	chr15	+	7930	19	NNC	ENSMUSG00000039704.9	novel	3210	18	NA	NA	-2	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	9.68389269755597	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTACAGTCTTGTTGAT	30	False	NA	2	True	AATAAA	-12	NA	9140634	9202560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175345_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742_9200496_9200521
Isoform_54071_55	chr15	+	928	5	FSM	ENSMUSG00000039676.5	ENSMUST00000042360.5	949	5	22	-1	22	1	multi-exon	FALSE	canonical	3	64	junction_4	9.67923034130297	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCTCCTTTGAAGCTG	19	False	NA	10	True	AATAAA	-23	NA	9436135	9466125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_9436254_9457782_9457920_9461742_9461921_9462676_9462887_9465840
Isoform_54072_4	chr15	+	717	4	FSM	ENSMUSG00000039676.5	ENSMUST00000226688.2	739	4	20	2	20	-2	multi-exon	FALSE	canonical	0	0	junction_3	38.1138644939957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTGCCTCCTTTGAAG	17	False	NA	7	True	AATAAA	-20	NA	9436133	9466122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_9436254_9457782_9457920_9461742_9461921_9465840
Isoform_54074_387	chr15	+	1478	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	32	4	1	1	multi-exon	FALSE	canonical	3	345	junction_1	183.88039590995	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGTACTGTCCTGTGT	36	False	NA	23	True	AATAAA	-28	NA	10486135	10493771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
Isoform_54078_11	chr15	+	1359	5	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	353.147543528197	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATCCGACTTACTGTAC	36	False	NA	13	True	AATAAA	-18	NA	10486135	10493761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_10486351_10486538_10486803_10490341_10490601_10492850_10492950_10493239
Isoform_54080_21	chr15	+	1676	5	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	5	intron_retention	FALSE	canonical	3	683	junction_1	74.1598779664584	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCCTGTGTCTTTTGTTC	35	False	NA	32	True	AATAAA	-37	NA	10486134	10493780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
Isoform_54082_183	chr15	+	1517	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	39	1021	39	598	multi-exon	FALSE	canonical	3	110	junction_2	9.36416040016402	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCAGTGGTTTTAAG	88	False	NA	33	True	AATAAA	-43	NA	10981880	10995691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
Isoform_54084_4	chr15	+	1492	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	0	1085	0	534	multi-exon	FALSE	canonical	3	110	junction_2	9.36416040016402	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTGATCATATATTAAATA	49	False	NA	-31	True	ATTAAA	-19	NA	10981841	10995627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
Isoform_54086_15	chr15	+	618	3	FSM	ENSMUSG00000022201.17	ENSMUST00000124621.2	513	3	-27	-78	8	78	multi-exon	FALSE	canonical	3	26	junction_2	305.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATCATTTGGAAACATT	48	False	NA	NA	False	AATAAA	-12	NA	12117924	12122501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12118034_12118324_12118425_12122092
Isoform_54088_72	chr15	+	4626	21	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	8	-240	combination_of_known_splicesites	FALSE	canonical	1	46	junction_3	185.137489450408	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	48	False	NA	12	True	AATAAA	-12	NA	12117924	12185529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
Isoform_54096_596	chr15	+	4630	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	-10	230	-10	-230	multi-exon	TRUE	canonical	1	184	junction_8	102.146464828737	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTGTTATGTGGTAG	30	False	NA	22	True	AATAAA	-22	NA	12117906	12185539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
Isoform_54104_28	chr15	+	4400	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-1	-231	combination_of_known_splicesites	FALSE	canonical	1	10	junction_6	165.91817111508	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTGTGTTATGTGGTA	67	False	NA	21	True	AATAAA	-21	NA	12117943	12185538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
Isoform_54106_14	chr15	+	4483	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-1	-240	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	163.420573829054	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	67	False	NA	12	True	AATAAA	-12	NA	12117943	12185529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
Isoform_54119_89	chr15	+	4322	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-87	124	-11	1	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCAAGTTTGGAAGTGT	9	True	NA	29	True	ATTAAA	-32	NA	12205102	12272081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_54120_43	chr15	+	4461	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-87	-15	-11	15	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTCACTGTGCAGTT	9	True	NA	-97	True	ATTAAA	-36	NA	12205102	12272220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_54121_31	chr15	+	4501	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-23	-119	-4	-2	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCATGGTTGGTGTGCACG	25	False	NA	7	True	ATTAAA	-18	NA	12205166	12272324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_54129_7	chr15	+	2171	15	ISM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	61	7341	4	-4839	5prime_fragment	FALSE	canonical	3	174	junction_5	32.4575861388241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCATCTGTATTTTAT	33	False	NA	NA	False	AATAAA	-14	NA	12205174	12267241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692
Isoform_54130_259	chr15	+	4348	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-11	2503	-11	-1	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTGCAAGTTTGGAAGT	9	True	NA	27	True	ATTAAA	-30	NA	12205102	12272079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_54132_63	chr15	+	4615	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-32	2257	-32	-1	multi-exon	TRUE	canonical	3	174	junction_5	33.0552399611452	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTTGGTGTGCACGG	-12	True	NA	8	True	ATTAAA	-19	NA	12205081	12272325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_54134_99	chr15	+	4407	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	62	2371	5	6	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTGAGTCAGCTTCAC	34	False	NA	NA	False	ATTAAA	-27	NA	12205175	12272211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_54146_444	chr15	+	2658	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	3	-9	3	9	multi-exon	TRUE	canonical	3	392	junction_2	32.4174164437712	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGCCATTTGATTTTT	-2	True	NA	27	True	AATAAA	-35	NA	12321538	12351360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
Isoform_54148_179	chr15	+	2975	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	3	-326	3	0	multi-exon	FALSE	canonical	3	392	junction_2	32.4174164437712	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTATTTTATGAGT	-2	True	NA	11	True	AATAAA	-13	NA	12321538	12351677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
Isoform_54157_55	chr15	+	4592	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-44	intron_retention	FALSE	canonical	3	44	junction_3	169.480343812418	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	69	False	NA	-15	True	AATAAA	-13	NA	12824964	12935332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
Isoform_54161_944	chr15	+	4458	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	16	45	-11	-44	multi-exon	FALSE	canonical	3	495	junction_3	95.4793814587056	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	69	False	NA	-15	True	AATAAA	-13	NA	12824964	12935332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
Isoform_54162_16	chr15	+	4597	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	16	-94	-11	94	multi-exon	FALSE	canonical	3	495	junction_3	95.4793814587056	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGGAGTAGTTGCTTTC	69	False	NA	10	True	AATAAA	-17	NA	12824964	12935471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
Isoform_54168_171	chr15	+	4499	32	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	8696	45	-3791	-44	3prime_fragment	FALSE	canonical	3	538	junction_3	90.1454368888601	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	32	False	NA	-15	True	AATAAA	-13	NA	12833644	12935332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
Isoform_54201_35	chr15	+	8073	41	FSM	ENSMUSG00000022272.18	ENSMUST00000110457.8	8125	41	50	2	26	0	multi-exon	FALSE	canonical	3	32	junction_1	332.593497192895	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	87	False	NA	14	True	AATAAA	-15	NA	25622660	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725157_25725172_25725281_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_54206_123	chr15	+	5822	23	NIC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	229	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	149.870088371328	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	58	False	NA	14	True	AATAAA	-15	NA	25753293	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_54207_24	chr15	+	5853	23	NIC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	198	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	149.870088371328	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	27	False	NA	14	True	AATAAA	-15	NA	25753262	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_54213_30	chr15	+	6096	23	NIC	ENSMUSG00000022272.18	novel	748	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	157.493040643832	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	64	False	NA	14	True	AATAAA	-15	NA	25758850	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_25759238_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_54226_507	chr15	+	6004	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	17	False	NA	14	True	AATAAA	-15	NA	25774099	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_54236_15	chr15	+	5472	18	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	27116	0	-164	0	3prime_fragment	FALSE	canonical	3	571	junction_1	64.2179463754347	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	95	False	NA	14	True	AATAAA	-15	NA	25780111	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_54240_20	chr15	+	5151	17	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	27998	0	718	0	3prime_fragment	FALSE	canonical	3	658	junction_13	51.5299897511148	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	977	False	NA	14	True	AATAAA	-15	NA	25780993	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_54285_40	chr15	+	3116	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	132	0	132	0	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	40	False	NA	21	True	TATAAA	-17	NA	25843397	25973773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
Isoform_54287_29	chr15	+	1935	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	-34	1347	-34	3	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAACCAAA	15	True	NA	NA	False	GGGGCT	-16	NA	25843231	25972426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
Isoform_54288_10	chr15	+	3292	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	-44	0	-44	0	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	5	True	NA	21	True	TATAAA	-17	NA	25843221	25973773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
Isoform_54290_20	chr15	+	3152	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	96	0	96	0	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	4	False	NA	21	True	TATAAA	-17	NA	25843361	25973773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
Isoform_54293_495	chr15	+	1748	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	1	1053	1	1	multi-exon	FALSE	canonical	3	450	junction_2	26.9962960422351	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGTATTTGAGCAGTGT	28	False	NA	16	True	AATAAA	-23	NA	25984452	25997514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
Isoform_54294_66	chr15	+	1780	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	-31	1053	-31	1	multi-exon	TRUE	canonical	3	450	junction_2	26.9962960422351	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGTATTTGAGCAGTGT	-4	True	NA	16	True	AATAAA	-23	NA	25984420	25997514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
Isoform_54302_61	chr15	+	3500	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-5	3	-5	-3	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGGCTATTTTCAT	47	False	NA	20	True	ATTAAA	-16	NA	27466757	27594992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
Isoform_54305_9	chr15	+	3654	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-161	5	-161	-5	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTGTGGCTATTTTC	-1	True	NA	18	True	ATTAAA	-14	NA	27466601	27594990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
Isoform_54306_36	chr15	+	3546	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-51	3	-51	-3	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGGCTATTTTCAT	1	True	NA	20	True	ATTAAA	-16	NA	27466711	27594992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
Isoform_54313_3	chr15	+	3998	17	ISM	ENSMUSG00000022240.11	ENSMUST00000081728.7	5944	23	474269	710	330	222	3prime_fragment	FALSE	canonical	2	8	junction_10	13.4530433359891	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTGCTAAGAATGTCTA	61	False	NA	NA	False	AATAAA	-21	NA	30647007	31028777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30920857_30920933_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
Isoform_54314_3	chr15	+	3129	10	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473699	105093	218	-97828	internal_fragment	FALSE	canonical	3	25	junction_9	11.0933190883099	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCAGCTTTCCCCGAT	16	True	NA	NA	False	NA	NA	NA	30646895	30923094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000
Isoform_54316_3	chr15	+	3739	16	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473628	-223	147	-145	3prime_fragment	FALSE	canonical	3	23	junction_10	10.715720538847	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGTTCTAAATATTGCT	70	False	NA	NA	False	NA	NA	NA	30646824	31028410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
Isoform_54318_9	chr15	+	4031	16	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473700	-587	219	219	3prime_fragment	FALSE	canonical	3	23	junction_10	10.715720538847	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCCTTGCTAAGAATGT	17	True	NA	NA	False	AATAAA	-18	NA	30646896	31028774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
Isoform_54320_3	chr15	+	4072	16	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473656	-584	175	216	3prime_fragment	FALSE	canonical	3	23	junction_10	10.715720538847	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCATCCTTGCTAAGAA	-27	True	NA	NA	False	AATAAA	-15	NA	30646852	31028771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
Isoform_54321_26	chr15	+	1410	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	144	1	3	-1	multi-exon	FALSE	canonical	3	65	junction_3	1.69967317119759	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTCTCTTACGGTTCA	135	False	NA	20	True	AATAAA	-20	NA	31224603	31274486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
Isoform_54322_25	chr15	+	1446	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	109	0	-32	0	multi-exon	FALSE	canonical	3	65	junction_3	1.69967317119759	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTCTTACGGTTCAG	100	False	NA	21	True	AATAAA	-21	NA	31224568	31274487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
Isoform_54323_3	chr15	+	1541	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	9	5	9	-5	multi-exon	FALSE	canonical	3	65	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTGTCTCTCTTACGG	0	True	NA	16	True	AATAAA	-16	NA	31224468	31274482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
Isoform_54324_3	chr15	+	1170	6	FSM	ENSMUSG00000022235.16	ENSMUST00000070918.14	1155	6	-17	2	-10	-2	multi-exon	TRUE	canonical	0	0	junction_1	2.60768096208106	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATGCGTAGCTTCACT	38	False	NA	NA	False	AATAAA	-16	NA	31568926	31590263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_31569086_31581985_31582220_31584110_31584219_31585440_31585584_31588313_31588406_31589829
Isoform_54325_4	chr15	+	1265	6	FSM	ENSMUSG00000039065.12	ENSMUST00000161061.3	2364	6	13	1086	13	-12	multi-exon	FALSE	canonical	0	0	junction_1	11.3490087672889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTAGCTTTATAACCG	128	False	NA	15	True	ATTAAA	-15	NA	31602276	31617669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_31602296_31603594_31603721_31606056_31606335_31608241_31608380_31609711_31609763_31617016
Isoform_54326_23	chr15	+	1153	5	FSM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	13	-2	13	2	multi-exon	FALSE	canonical	3	10	junction_1	6.68954408012983	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCGTGACAAGGAGTGTT	128	False	NA	29	True	ATTAAA	-29	NA	31602276	31617683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_31602296_31606056_31606335_31608241_31608380_31609711_31609763_31617016
Isoform_54327_7	chr15	+	695	2	FSM	ENSMUSG00000039065.12	ENSMUST00000160146.2	4655	2	269	3691	3	1	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCGTGACAAGGAGTGT	118	False	NA	28	True	ATTAAA	-28	NA	31602266	31617682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_31602296_31617016
Isoform_54329_67	chr15	+	3220	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	96	211	96	-211	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAACTCATTGTATAGAC	122	False	NA	NA	False	AATAAA	-15	NA	32920964	33034870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
Isoform_5433_15	chr10	+	2384	6	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.8990329867172	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCACTGGTTTTTATT	NA	False	NA	7	True	AATAAA	-16	NA	4382624	4405139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_4382712_4384827_4384934_4389491_4389737_4398308_4398424_4400646_4400810_4403471
Isoform_54341_56	chr15	+	4951	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-6	-2089	combination_of_known_junctions	TRUE	canonical	3	44	junction_6	197.527406677881	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTACATTCTCTGTGG	21	True	NA	23	True	AATAAA	-24	NA	34082833	34143681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
Isoform_5435_378	chr10	+	2260	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	168	1	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	8	True	AATAAA	-17	NA	4382634	4405140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
Isoform_54351_315	chr15	+	4832	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-2	2089	-2	-2089	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTACATTCTCTGTGG	50	False	NA	23	True	AATAAA	-24	NA	34082862	34143681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
Isoform_5436_48	chr10	+	2420	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	1	8	1	-7	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGAGCTCTCACTGGTT	NA	False	NA	1	True	AATAAA	-43	NA	4382467	4405133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
Isoform_54367_98	chr15	+	4684	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-12	-2090	combination_of_known_junctions	FALSE	canonical	3	69	junction_10	158.303032188269	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	40	False	NA	22	True	AATAAA	-23	NA	34082852	34143680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
Isoform_54375_50	chr15	+	4755	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	0	-2090	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	27	False	NA	22	True	AATAAA	-23	NA	34082839	34143680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
Isoform_54389_703	chr15	+	1775	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	124	3	3	-3	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTCGTGGCTCCGCTG	114	False	NA	NA	False	ATTAAA	-19	NA	34238297	34284445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
Isoform_54390_88	chr15	+	1814	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	82	6	-39	1	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACAGTCGTGGCTCCG	72	False	NA	NA	False	ATTAAA	-16	NA	34238255	34284442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
Isoform_54396_159	chr15	+	3291	16	FSM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	-2	-14	-2	3	multi-exon	FALSE	canonical	3	39	junction_3	10.1552394796425	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTTTTTAATCTGAC	92	False	NA	12	True	ATTAAA	-22	NA	34495466	34530797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
Isoform_54397_9	chr15	+	4480	16	FSM	ENSMUSG00000022325.15_ENSMUSG00000115005.2_ENSMUSG00000084607.3	ENSMUST00000079028.6	3275	16	-5	-1200	-5	14	multi-exon	FALSE	canonical	3	39	junction_3	10.1552394796425	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCTAGTTAAAAAAAAACAT	89	False	NA	NA	False	ATTAAA	-7	NA	34495463	34531983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
Isoform_54402_4	chr15	+	5202	2	FSM	ENSMUSG00000050963.8	ENSMUST00000072868.5	5456	2	111	143	111	39	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGCGGCTCCTGCGCC	192	False	NA	NA	False	NA	NA	NA	34837611	34843410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_34837999_34838595
Isoform_54403_16	chr15	+	1808	4	NIC	ENSMUSG00000022330.6	novel	1724	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	14.8548533034381	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTCTTGAGATTCATCT	115	False	NA	13	True	AATAAA	-16	NA	35296241	35303451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_35296614_35300334_35301102_35302057_35302158_35302882
Isoform_54404_52	chr15	+	1722	4	FSM	ENSMUSG00000022330.6	ENSMUST00000022952.6	1724	4	2	0	2	0	multi-exon	FALSE	canonical	3	27	junction_3	10.1434160364686	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTCTTGAGATTCATCT	119	False	NA	13	True	AATAAA	-16	NA	35296245	35303451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_35296614_35300334_35301102_35302057_35302158_35302964
Isoform_54405_4	chr15	+	956	3	FSM	ENSMUSG00000022330.6	ENSMUST00000228684.2	579	3	-11	-366	2	1	multi-exon	FALSE	canonical	2	8	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGAGATTCATCTT	119	False	NA	14	True	AATAAA	-17	NA	35296245	35303452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_35296614_35302057_35302158_35302964
Isoform_54406_3	chr15	+	7314	39	ISM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	420	136696	14	-49001	5prime_fragment	FALSE	canonical	3	30	junction_28	11.0548869879248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAATGCTTGGAACATA	180	False	NA	8	True	AATAAA	-9	NA	35371725	35794679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
Isoform_54407_7	chr15	+	13347	62	FSM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	408	2	2	-2	multi-exon	TRUE	canonical	3	23	junction_44	12.5602231076886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAAGGTGTGCTGTGAGT	168	False	NA	NA	False	AATAAA	-26	NA	35371713	35931373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450_35794636_35834329_35834527_35840020_35840203_35841394_35841745_35846991_35847154_35869432_35869589_35875707_35875972_35876525_35876610_35876787_35876964_35877642_35877814_35878788_35878991_35879914_35880104_35883034_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
Isoform_54408_6	chr15	+	7334	39	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	-2	-48994	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_20	11.9311564014052	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAACATACTTTTTA	164	False	NA	15	True	AATAAA	-16	NA	35371709	35794686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
Isoform_5441_11	chr10	+	996	5	ISM	ENSMUSG00000019767.13	ENSMUST00000138112.8	3350	11	13	41126	13	6793	5prime_fragment	FALSE	canonical	2	4	junction_1	3.41869858279434	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTTGTTTGTTTG	3220	False	NA	NA	False	ATTAAA	-17	NA	4432514	4471105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_4432629_4462751_4462881_4464055_4464313_4468905_4469051_4470754
Isoform_54410_8	chr15	+	3739	20	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	1	-72461	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_19	14.5875900659951	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTCTGATGTAATGA	150	False	NA	NA	False	AATAAA	-20	NA	35371695	35570637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35569975
Isoform_54411_4	chr15	+	4159	20	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-35	-72466	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_19	14.5875900659951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTTGTCTTCTGATGT	14	False	NA	NA	False	AATAAA	-15	NA	35371270	35570632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35569975
Isoform_54415_4	chr15	+	1159	3	ISM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	42	565	19	-565	5prime_fragment	FALSE	canonical	3	810	junction_1	15.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAGGAAAAAAAA	151	False	NA	NA	False	NA	NA	NA	36174197	36176588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_36174228_36175132_36175203_36175529
Isoform_54417_136	chr15	+	469	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	21	-1	-2	1	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTCTATTCAATGTC	130	False	NA	NA	False	ATTAAA	-13	NA	36174176	36177154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
Isoform_54418_160	chr15	+	384	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	42	63	19	-63	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGGCTTAATTTATTG	151	False	NA	NA	False	TATAAA	-16	NA	36174197	36177090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
Isoform_54419_27	chr15	+	516	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	19	66	19	-63	multi-exon	FALSE	canonical	3	181	junction_1	282.916948944385	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGGCTTAATTTATTG	151	False	NA	NA	False	TATAAA	-16	NA	36174197	36177090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
Isoform_54420_24	chr15	+	580	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	19	2	19	1	multi-exon	FALSE	canonical	3	181	junction_1	282.916948944385	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTCTATTCAATGTC	151	False	NA	NA	False	ATTAAA	-13	NA	36174197	36177154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
Isoform_54424_25	chr15	+	2381	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	18	-11	18	0	multi-exon	FALSE	canonical	3	39	junction_4	7	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCCTGCGTGTCTGTAT	90	False	NA	NA	False	AATAAA	-25	NA	36210625	36235767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
Isoform_54425_7	chr15	+	2461	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	-64	-9	-64	-2	multi-exon	FALSE	canonical	3	39	junction_4	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTATGCCTGCGTGTCTGT	8	True	NA	NA	False	AATAAA	-23	NA	36210543	36235765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
Isoform_54427_7	chr15	+	1999	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	-52	441	-52	-8	multi-exon	FALSE	canonical	3	39	junction_4	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACATTCTTTGTGGTG	20	False	NA	NA	False	ATTAAA	-6	NA	36210555	36235315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
Isoform_54430_5	chr15	+	5307	2	ISM	ENSMUSG00000022286.17	ENSMUST00000159221.2	717	7	12004	-2622	12004	0	intron_retention	FALSE	canonical	3	68	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAACAGCTCTCTAGTA	219	False	NA	13	True	AATAAA	-14	NA	37347984	37363806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_37348099_37358613
Isoform_54431_228	chr15	+	3011	3	ISM	ENSMUSG00000022286.17	ENSMUST00000161933.2	3617	9	29337	-5	12003	-2	3prime_fragment	FALSE	canonical	3	68	junction_1	5	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTCTCTAGTACTTTC	218	False	NA	18	True	AATAAA	-19	NA	37347983	37363811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_37348099_37358613_37358679_37360980
Isoform_54432_58	chr15	+	3063	3	ISM	ENSMUSG00000022286.17	ENSMUST00000161933.2	3617	9	29285	-5	11951	-2	3prime_fragment	FALSE	canonical	3	68	junction_1	5	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTCTCTAGTACTTTC	166	False	NA	18	True	AATAAA	-19	NA	37347931	37363811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_37348099_37358613_37358679_37360980
Isoform_54437_1205	chr15	+	2051	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	12	8	1	-5	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	1205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGCAGTGCTAGTCA	196	False	NA	23	True	AATAAA	-9	NA	38662188	38692682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
Isoform_54463_27	chr15	+	4018	7	FSM	ENSMUSG00000022297.16	ENSMUST00000179165.9	4325	7	308	-1	9	1	multi-exon	FALSE	canonical	2	8	junction_1	5.64702478203247	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTGTATTGTGTGCTA	NA	False	NA	NA	False	AATAAA	-15	NA	38869736	38901584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_38869828_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
Isoform_54465_8	chr15	+	4134	7	FSM	ENSMUSG00000022297.16	ENSMUST00000022906.8	4081	7	-51	-2	2	0	multi-exon	FALSE	canonical	2	5	junction_1	6.28269227499025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTGTATTGTGTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	38869676	38901583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_38869885_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
Isoform_54466_14	chr15	+	1196	4	FSM	ENSMUSG00000054196.8	ENSMUST00000067072.5	1166	4	-31	1	-31	-1	multi-exon	FALSE	canonical	3	14	junction_1	1.88561808316413	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTTGTTTATTTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	38940295	38950515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_38940555_38943877_38944100_38947660_38947878_38950017
Isoform_54468_782	chr15	+	1484	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	65	2	65	1	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGCAGTTGTGTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	38976324	39010249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
Isoform_54469_10	chr15	+	1558	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	-10	3	-10	0	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGCAGTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	38976249	39010248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
Isoform_5447_413	chr10	+	3366	7	FSM	ENSMUSG00000019796.13	ENSMUST00000019931.12	3386	7	13	7	13	-7	multi-exon	FALSE	canonical	3	223	junction_6	23.7065391822594	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCTTTCTTATAA	7278	False	NA	16	True	AATAAA	-23	NA	7465593	7501240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
Isoform_54475_4	chr15	+	5384	26	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-42	39	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	11.0478233150245	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTATATTATTTTTAAA	NA	False	NA	96	True	NA	NA	NA	39061613	39545888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
Isoform_54476_4	chr15	+	5223	26	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	31	-49	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	11.0478233150245	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGATTAGCTGAATATT	NA	False	NA	8	True	ATTAAA	-19	NA	39061686	39545800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
Isoform_54477_4	chr15	+	1527	6	ISM	ENSMUSG00000037386.17	ENSMUST00000227381.2	4581	24	179349	43	29639	-43	3prime_fragment	FALSE	canonical	3	30	junction_1	8.62554346113913	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGCTGAATATTTAAATT	NA	False	NA	14	True	ATTAAA	-25	NA	39479741	39545806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
Isoform_54479_4	chr15	+	2076	3	ISM	ENSMUSG00000022303.10	ENSMUST00000022913.6	1997	4	8134	3	8122	1	3prime_fragment	FALSE	canonical	3	14	junction_1	5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCTTGATCATGTGAC	NA	False	NA	7	True	NA	NA	NA	39617461	39624331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_39618622_39622709_39623019_39623724
Isoform_54481_3	chr15	+	1972	3	ISM	ENSMUSG00000022303.10	ENSMUST00000227368.2	1825	4	8068	1	8056	-1	3prime_fragment	FALSE	canonical	3	10	junction_1	7	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCCTTGATCATGTG	NA	False	NA	5	True	NA	NA	NA	39617395	39624329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_39618622_39622877_39623019_39623724
Isoform_54484_27	chr15	+	4568	16	FSM	ENSMUSG00000022307.17	ENSMUST00000090096.11	4515	16	-53	0	-53	0	multi-exon	FALSE	canonical	3	24	junction_1	96.1974820645299	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTTTGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	41310824	41724441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
Isoform_54492_27	chr15	+	2986	9	ISM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	34016	0	2	5prime_fragment	FALSE	canonical	3	180	junction_7	41.0662574384372	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAGTTTCATTTATAAT	NA	False	NA	NA	False	NA	NA	NA	41652336	41690427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285
Isoform_54494_8	chr15	+	3656	15	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	-36	-805	combination_of_known_junctions	FALSE	canonical	3	6	junction_9	93.88912805723	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGTATATGTTATTAG	NA	False	NA	18	True	AATAAA	-15	NA	41652300	41723636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
Isoform_54497_302	chr15	+	4344	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	1	1	1	1	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTTGGATTTTTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	41652337	41724442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
Isoform_54502_28	chr15	+	4376	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	-32	2	-32	0	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTTTGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	41652304	41724441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
Isoform_54512_537	chr15	+	1202	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	35	-6	23	6	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTAGTTTCTTTTGT	NA	False	NA	16	True	AATAAA	-26	NA	43340659	43391165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
Isoform_54513_104	chr15	+	1247	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	-9	-7	-9	7	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTAGTTTCTTTTGTT	NA	False	NA	17	True	AATAAA	-27	NA	43340615	43391166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
Isoform_54515_6	chr15	+	686	6	FSM	ENSMUSG00000022338.9	ENSMUST00000228130.2	654	6	-34	2	1	-2	multi-exon	FALSE	canonical	3	35	junction_2	414.684747730128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTCTGTTTATTAC	9617	False	NA	38	True	AATAAA	-40	NA	44291488	44299288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_44291567_44292955_44293033_44294086_44294191_44295833_44295905_44297294_44297370_44299007
Isoform_54518_57	chr15	+	557	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	1	0	1	0	multi-exon	FALSE	canonical	3	313	junction_1	272.243457221657	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9617	False	NA	13	True	AATAAA	-15	NA	44291488	44299263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
Isoform_54520_5	chr15	+	2959	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	-12	-2389	-12	0	multi-exon	FALSE	canonical	3	313	junction_1	272.243457221657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCTCATTGATTT	9604	False	NA	5	True	AATAAA	-16	NA	44291475	44301652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
Isoform_54521_6	chr15	+	555	5	NIC	ENSMUSG00000022338.9	novel	558	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_3	380.98777867538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9617	False	NA	13	True	AATAAA	-15	NA	44291488	44299263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_44291567_44292955_44293033_44295833_44295905_44297296_44297370_44299007
Isoform_54522_10	chr15	+	1944	4	NIC	ENSMUSG00000022338.9	novel	654	6	NA	NA	2	-6	intron_retention	FALSE	canonical	3	313	junction_1	301.000922848345	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGGGACTCTGTTTA	9641	False	NA	34	True	AATAAA	-36	NA	44291512	44299284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_44291567_44292955_44293033_44295833_44297370_44299007
Isoform_54524_4	chr15	+	688	6	NIC	ENSMUSG00000022338.9	novel	767	6	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	410.911864029259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTTTTTATTTTGG	9663	False	NA	14	True	AATAAA	-16	NA	44291534	44299264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_44291639_44292955_44293033_44294086_44294191_44295833_44295905_44297294_44297370_44299007
Isoform_54525_161	chr15	+	629	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-18	2389	1	0	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9617	False	NA	13	True	AATAAA	-15	NA	44291488	44299263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
Isoform_54528_13	chr15	+	3018	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-18	0	1	0	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCTCATTGATTT	9617	False	NA	5	True	AATAAA	-16	NA	44291488	44301652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
Isoform_54529_10	chr15	+	628	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226336.2	2547	5	-23	1942	0	0	multi-exon	FALSE	canonical	3	93	junction_3	350.174510066053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9616	False	NA	13	True	AATAAA	-15	NA	44291487	44299263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297296_44297370_44299007
Isoform_54531_9	chr15	+	2019	4	NIC	ENSMUSG00000022338.9	novel	3000	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	627	junction_1	155.701280948131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9617	False	NA	13	True	AATAAA	-15	NA	44291488	44299263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_44291639_44292955_44293033_44295833_44297370_44299007
Isoform_54534_5	chr15	+	3351	3	NIC	ENSMUSG00000022338.9	novel	2708	5	NA	NA	1	-12	intron_retention	FALSE	canonical	3	895	junction_1	50.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAATAAATGGGACTC	9617	False	NA	28	True	AATAAA	-30	NA	44291488	44299278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_44293033_44295833_44297370_44299007
Isoform_54535_15	chr15	+	1954	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	-11	2	-11	-2	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAACTGATTTTCTGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	44482559	44504909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
Isoform_54536_27	chr15	+	1466	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	-11	490	-11	-1	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTGTATATCCTTAT	NA	False	NA	11	True	ATTAAA	-21	NA	44482559	44504421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
Isoform_54542_92	chr15	+	975	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	15	1931	15	0	multi-exon	FALSE	canonical	3	321	junction_1	13	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCATCTTCAGTTGTT	NA	False	NA	21	True	AGTAAA	-18	NA	51740839	51746079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_51741107_51744411_51744587_51745546
Isoform_54543_144	chr15	+	945	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	46	1930	-3	0	multi-exon	FALSE	canonical	3	321	junction_1	13	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCATCTTCAGTTGTTG	NA	False	NA	22	True	AGTAAA	-19	NA	51740870	51746080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_51741107_51744411_51744587_51745546
Isoform_54544_22	chr15	+	2884	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	46	-9	-3	9	multi-exon	FALSE	canonical	3	321	junction_1	13	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATAGTTTTTCATGTGTA	NA	False	NA	NA	False	AATAAA	-24	NA	51740870	51748019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_51741107_51744411_51744587_51745546
Isoform_54545_8	chr15	+	2937	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	-8	-8	-8	8	multi-exon	FALSE	canonical	3	321	junction_1	13	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATAGTTTTTCATGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	51740816	51748018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_51741107_51744411_51744587_51745546
Isoform_54555_217	chr15	+	1296	2	FSM	ENSMUSG00000068522.5	ENSMUST00000090025.5	1348	2	50	2	50	-2	multi-exon	FALSE	canonical	3	258	junction_1	0	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTTTCTAGTGGTC	NA	False	NA	14	True	AATAAA	-25	NA	51903552	51909116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_51903927_51908194
Isoform_54557_528	chr15	+	875	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	1	131	1	-131	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTACTTGTTTCTGTT	NA	False	NA	19	True	AATAAA	-32	NA	52575838	52593829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
Isoform_54558_79	chr15	+	910	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	-34	131	0	-131	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTACTTGTTTCTGTT	NA	False	NA	19	True	AATAAA	-32	NA	52575803	52593829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
Isoform_5456_17	chr10	+	2676	3	FSM	ENSMUSG00000019796.13	ENSMUST00000135907.8	976	3	-254	-1446	56	-15	multi-exon	FALSE	canonical	3	11	junction_1	106	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTTTAAAAAAAATTCTT	7321	False	NA	8	True	AATAAA	-15	NA	7465636	7501232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_7466378_7484307_7484404_7499393
Isoform_54571_10	chr15	+	8389	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	150	8	43	-8	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACCAAGTGCTGAC	NA	False	NA	2	True	AATAAA	-13	NA	54975862	55122659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
Isoform_54574_322	chr15	+	2954	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	190	0	3	0	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55420993	55489819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
Isoform_54575_42	chr15	+	3147	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	-3	0	-3	0	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55420800	55489819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
Isoform_54576_30	chr15	+	3182	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	-38	0	-38	0	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55420765	55489819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
Isoform_54578_7	chr15	+	3699	21	NIC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	3	0	intron_retention	FALSE	canonical	3	131	junction_14	24.4917843367934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTTGGATTGCATGTC	NA	False	NA	NA	False	AATAAA	-15	NA	55420993	55489817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55484133_55488786_55488853_55489533
Isoform_54579_5	chr15	+	3197	23	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	53.0822105265047	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTGGATTGCATGT	NA	False	NA	NA	False	AATAAA	-14	NA	55421005	55489816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55450071_55450330_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
Isoform_54581_4	chr15	+	4368	4	FSM	ENSMUSG00000071757.11	ENSMUST00000096430.11	4376	4	2	6	2	-6	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCCTCTGCTCCCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	57558062	57703222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_57558401_57626041_57626116_57684427_57687148_57701986
Isoform_54584_47	chr15	+	3545	17	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	9	-1	4	1	intron_retention	FALSE	canonical	3	200	junction_2	25.2003689209107	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCTGCATGTAATTGA	NA	False	NA	3	True	AATAAA	-17	NA	57775638	57822799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
Isoform_54588_86	chr15	+	3473	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGAACTGTCTTCTTTG	NA	False	NA	12	True	AATAAA	-19	NA	57775631	57833461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
Isoform_54589_17	chr15	+	3494	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775606	57833457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
Isoform_5459_1181	chr10	+	1249	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	41	-4	4	4	multi-exon	FALSE	canonical	3	1090	junction_2	84.4680835751418	1181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCTTGCTGCTTGCT	NA	False	NA	24	True	AATAAA	-24	NA	7543307	7554649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
Isoform_54591_229	chr15	+	3270	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	37	4	2	-4	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57775631	57833453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
Isoform_54592_24	chr15	+	3313	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	1	-3	1	3	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGAACTGTCTTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	57775595	57833460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
Isoform_54593_20	chr15	+	3183	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_19	47.7117383072465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775627	57833458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57833119
Isoform_54597_10	chr15	+	3358	21	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	75.3023240013215	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775627	57833458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
Isoform_54599_35	chr15	+	3162	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	59.3076396586785	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775627	57833457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
Isoform_54602_12	chr15	+	2602	16	ISM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	23817	-3	20003	3	3prime_fragment	FALSE	canonical	3	200	junction_4	37.4619214076848	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGAACTGTCTTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	57799411	57833460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
Isoform_54604_6	chr15	+	648	3	ISM	ENSMUSG00000022364.15	ENSMUST00000161329.2	914	6	5294	10	5294	-4	3prime_fragment	FALSE	canonical	3	284	junction_1	37.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57827102	57833453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_57827321_57831304_57831401_57833119
Isoform_54607_31	chr15	+	2244	5	NNC	ENSMUSG00000051225.10	novel	2876	4	NA	NA	-216	-321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.11737237261468	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAATTAAAAAACT	9488	False	NA	NA	False	NA	NA	NA	57849089	57874084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_57849360_57849395_57849938_57856302_57856471_57858609_57858735_57872945
Isoform_54611_39	chr15	+	1378	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	-2	7	-2	-7	multi-exon	FALSE	canonical	3	37	junction_4	11.5516232625549	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAATTTTGCTTTTGAA	2658	False	NA	20	True	AATAAA	-10	NA	58004770	58022043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
Isoform_54612_14	chr15	+	1227	5	FSM	ENSMUSG00000022359.11	ENSMUST00000228761.2	798	5	-15	-414	0	-7	multi-exon	FALSE	canonical	3	22	junction_3	18.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAATTTTGCTTTTGAA	2660	False	NA	20	True	AATAAA	-10	NA	58004772	58022043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58016975_58017101_58021297
Isoform_54615_7	chr15	+	1235	5	NIC	ENSMUSG00000022359.11	novel	1383	6	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	21.3131414859471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAATTTTGCTTTTGAA	2660	False	NA	20	True	AATAAA	-10	NA	58004772	58022043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_58004978_58011729_58011838_58014001_58014053_58016975_58017101_58021297
Isoform_54617_544	chr15	+	5561	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-4	3	-4	-3	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTGTGGAGAGTGTC	NA	False	NA	13	True	AATAAA	-13	NA	58287312	58329586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
Isoform_54619_59	chr15	+	5625	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-4	-61	-4	61	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTGGCTTTCCTGTG	NA	False	NA	2	True	ATTAAA	-15	NA	58287312	58329650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
Isoform_54624_27	chr15	+	5432	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	3	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	73.4212486414261	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGAGAGTGTCTAATTT	NA	False	NA	19	True	AATAAA	-19	NA	58287312	58329592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
Isoform_5464_43	chr10	+	1166	3	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-4	18514	-4	-15640	5prime_fragment	FALSE	canonical	3	105	junction_1	19	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCTCTCTCTCATTT	NA	False	NA	4	True	NA	NA	NA	7556973	7573710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_7557215_7567098_7567579_7573265
Isoform_54640_7	chr15	+	3199	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-298	1447	-298	-1447	multi-exon	FALSE	canonical	3	140	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTCCACATCATAAAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	58760779	58772792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_58761344_58770157
Isoform_54645_58	chr15	+	3762	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-236	822	-236	-822	multi-exon	FALSE	canonical	3	140	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCCAAAAATTTGAAAGGC	NA	False	NA	NA	False	AATAAA	-19	NA	58760841	58773417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_58761344_58770157
Isoform_54647_19	chr15	+	4585	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-236	-1	-236	1	multi-exon	FALSE	canonical	3	140	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGGTATTGTGACACT	NA	False	NA	NA	False	AATAAA	-26	NA	58760841	58774240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_58761344_58770157
Isoform_54650_2825	chr15	+	659	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	48	-3	-4	3	multi-exon	FALSE	canonical	3	3308	junction_3	178.75557489364	2825	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTGAAGTGTTCT	2864	False	NA	16	True	AATAAA	-17	NA	58805652	58811340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
Isoform_54658_2957	chr15	+	2785	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-26	-1	-22	1	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	2957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	False	NA	14	True	AATAAA	-19	NA	59186903	59203042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
Isoform_5466_15	chr10	+	2571	4	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-5	13150	-5	-10276	5prime_fragment	FALSE	canonical	3	58	junction_3	34.7658836600865	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACTTTATATAATTATA	NA	False	NA	NA	False	AATAAA	-22	NA	7556972	7579074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373
Isoform_54661_95	chr15	+	2807	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-48	-1	-44	1	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	False	NA	14	True	AATAAA	-19	NA	59186881	59203042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
Isoform_54674_126	chr15	+	1174	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	-40	-12	-2	0	multi-exon	FALSE	canonical	3	123	junction_4	348.219025608766	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246093	59473533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
Isoform_54676_762	chr15	+	1067	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	-13	0	-11	0	multi-exon	FALSE	canonical	3	776	junction_4	74.7677886674618	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246122	59473533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
Isoform_5468_11	chr10	+	2644	4	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-23	13095	-23	-10221	5prime_fragment	FALSE	canonical	3	58	junction_3	34.7658836600865	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACGGTTAATTTATACT	NA	False	NA	NA	False	NA	NA	NA	7556954	7579129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373
Isoform_54681_91	chr15	+	3648	3	FSM	ENSMUSG00000032501.10	ENSMUST00000067543.8	4330	3	127	555	127	-555	multi-exon	FALSE	canonical	3	22	junction_1	4.5	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATACAGTGAGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	59520325	59528393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_59521372_59523327_59523621_59526084
Isoform_54688_9	chr15	+	2381	3	FSM	ENSMUSG00000097493.4	ENSMUST00000180730.3	3074	3	694	-1	12	1	multi-exon	FALSE	canonical	1	1	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTGAGTTCCTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	60694813	60700500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_60696633_60699180_60699212_60699969
Isoform_54690_148	chr15	+	2182	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	159	-3	-14	3	multi-exon	FALSE	canonical	3	22	junction_2	2	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATTGGGCCAAC	NA	False	NA	NA	False	AATAAA	-10	NA	61857398	61862202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_61857801_61859355_61860128_61861194
Isoform_54691_21	chr15	+	2346	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	-5	-3	-5	3	multi-exon	FALSE	canonical	3	22	junction_2	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATTGGGCCAAC	NA	False	NA	NA	False	AATAAA	-10	NA	61857234	61862202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_61857801_61859355_61860128_61861194
Isoform_54694_39	chr15	+	2179	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	-14	21	-14	3	multi-exon	FALSE	canonical	3	8	junction_1	7	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATTGGGCCAAC	NA	False	NA	NA	False	AATAAA	-10	NA	61857398	61862202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_61857801_61859358_61860128_61861194
Isoform_54695_9	chr15	+	2343	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	-178	21	-5	3	multi-exon	FALSE	canonical	3	8	junction_1	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATTGGGCCAAC	NA	False	NA	NA	False	AATAAA	-10	NA	61857234	61862202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_61857801_61859358_61860128_61861194
Isoform_54699_3	chr15	+	2241	2	FSM	ENSMUSG00000022346.18	ENSMUST00000160009.2	1765	2	-396	-80	-8	-17	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATAATTGGA	NA	False	NA	NA	False	TTTAAA	-44	NA	61858874	61862182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_61860128_61861194
Isoform_5470_4	chr10	+	3171	5	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-4	10210	-4	-7336	5prime_fragment	FALSE	canonical	3	31	junction_4	43.0312386528671	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTGTCACTTTTGAA	NA	False	NA	NA	False	ATTAAA	-23	NA	7556973	7582014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223
Isoform_54700_7	chr15	+	1318	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	6.0736223860962	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGAAGTCATGATTGTC	NA	False	NA	26	True	AATAAA	-34	NA	61909872	62121376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_61910051_61978996_61979315_62021087_62021202_62047315_62047398_62114022_62114151_62114282_62114411_62121006
Isoform_54701_3	chr15	+	2781	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	22	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	6.0736223860962	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAAGCGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	61909856	62122823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_61910051_61978996_61979315_62021087_62021202_62047315_62047398_62114022_62114151_62114282_62114411_62121006
Isoform_54702_4	chr15	+	1337	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	7.7817450199525	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGAAGTCATGATTGT	NA	False	NA	25	True	AATAAA	-33	NA	61909877	62121375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
Isoform_54705_13	chr15	+	1980	15	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	139.24783367677	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	65658887	65725954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65725741
Isoform_54715_491	chr15	+	5202	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	9	4	1	-4	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAAGTGCATTTTTATT	NA	False	NA	13	True	AATAAA	-20	NA	65658897	65745661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
Isoform_5472_55	chr10	+	7219	8	FSM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	31	junction_4	35.692564823412	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACTGGAAAGCTGAAT	NA	False	NA	23	True	AATAAA	-26	NA	7556967	7592224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
Isoform_54721_23	chr15	+	5279	23	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	114.718520052236	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATAAGTGCATTTTTAT	NA	False	NA	12	True	AATAAA	-19	NA	65658886	65745660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
Isoform_54724_18	chr15	+	5351	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	151.690312316448	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	65658886	65745659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_65659096_65682033_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
Isoform_54730_5	chr15	+	3298	9	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	-17	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	20.8326666559997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCTAATTACTTTCCT	3813	False	NA	NA	False	AATAAA	-19	NA	66449391	66483468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469513_66469604_66475875_66476090_66476625_66476755_66481374
Isoform_54732_7	chr15	+	3271	9	ISM	ENSMUSG00000072501.6	ENSMUST00000229576.2	5094	22	-25	31945	-5	0	5prime_fragment	FALSE	canonical	3	13	junction_7	18.8878267675241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	3825	False	NA	NA	False	AATAAA	-16	NA	66449403	66483465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476625_66476755_66481374
Isoform_54734_13	chr15	+	3239	9	FSM	ENSMUSG00000072501.6	ENSMUST00000230882.2	3263	9	23	1	3	-1	multi-exon	FALSE	canonical	3	27	junction_5	13.8834433769148	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATGGCTCTAATTACTT	3853	False	NA	NA	False	AATAAA	-15	NA	66449431	66483464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
Isoform_54735_3	chr15	+	3170	8	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	21.6427392736064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATGGCTCTAATTACTT	3847	False	NA	NA	False	AATAAA	-15	NA	66449425	66483464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476625_66476755_66481374
Isoform_54737_7	chr15	+	3187	8	ISM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	-19	33636	1	3	5prime_fragment	FALSE	canonical	3	18	junction_5	17.128565471225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCTAATTACTTTCCT	3831	False	NA	NA	False	AATAAA	-19	NA	66449409	66483468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
Isoform_54738_13	chr15	+	3259	9	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	18.1916876622264	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTCTAATTACTTTC	3831	False	NA	NA	False	AATAAA	-17	NA	66449409	66483466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
Isoform_5474_8	chr10	+	5716	7	NIC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-20	-2	intron_retention	FALSE	canonical	2	3	junction_3	44.2621609152659	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGACTGGAAAGCTGA	NA	False	NA	21	True	AATAAA	-24	NA	7556957	7592222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_7557215_7567098_7567579_7573265_7573414_7581223_7581807_7586228_7586412_7586612_7586720_7588264
Isoform_54740_324	chr15	+	1902	9	FSM	ENSMUSG00000022332.9	ENSMUST00000022954.7	1887	9	-15	0	-15	0	multi-exon	FALSE	canonical	3	281	junction_5	27.0277635034792	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATTTTGTGTGTGTG	NA	False	NA	7	True	AATAAA	-7	NA	68800253	68965361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
Isoform_54745_423	chr15	+	851	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	21	-1	1	1	multi-exon	FALSE	canonical	3	479	junction_2	8	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTTCATTGAAGTGGT	NA	False	NA	8	True	ATTAAA	-19	NA	72962261	72965925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_72962433_72964681_72964809_72965372
Isoform_54747_21	chr15	+	2729	13	ISM	ENSMUSG00000036661.15	ENSMUST00000173292.8	5172	24	-67	24150	45	-9763	5prime_fragment	FALSE	canonical	3	9	junction_4	5.63409758129512	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGTTGTATACAATATG	NA	False	NA	NA	False	NA	NA	NA	73384453	73419798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969
Isoform_54749_3	chr15	+	2580	13	ISM	ENSMUSG00000036661.15	ENSMUST00000173292.8	5172	24	-92	24324	20	-9937	5prime_fragment	FALSE	canonical	3	9	junction_4	5.63409758129512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGGCTTTGTTTTTTTCC	NA	False	NA	NA	False	TATAAA	-40	NA	73384428	73419624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969
Isoform_54750_8	chr15	+	5261	23	FSM	ENSMUSG00000036661.15	ENSMUST00000043414.12	5299	23	20	18	20	-18	multi-exon	FALSE	canonical	2	4	junction_14	7.34678205825995	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGCTGGTTGCTTGACT	NA	False	NA	NA	False	AATAAA	-14	NA	73384428	73444073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
Isoform_54752_38	chr15	+	1706	6	FSM	ENSMUSG00000059895.14	ENSMUST00000230177.2	1680	6	-27	1	-27	0	multi-exon	FALSE	canonical	3	26	junction_1	34.6028900527109	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	19	True	AATAAA	-13	NA	73596619	73629075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_54754_4	chr15	+	3409	5	NIC	ENSMUSG00000059895.14	novel	1680	6	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	26	junction_1	38.6288428509061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGATGTGTGTGAAGAGT	NA	False	NA	15	True	AATAAA	-9	NA	73596640	73629071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_73596698_73622977_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_54755_33	chr15	+	1715	6	FSM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	5	1540	5	0	multi-exon	FALSE	canonical	3	41	junction_1	28.8124972885031	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	19	True	AATAAA	-13	NA	73620227	73629075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_73620315_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_54756_9	chr15	+	1749	6	FSM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	-29	1540	-29	0	multi-exon	FALSE	canonical	3	41	junction_1	28.8124972885031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	19	True	AATAAA	-13	NA	73620193	73629075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_73620315_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_54758_6	chr15	+	1238	3	ISM	ENSMUSG00000034730.18	ENSMUST00000187639.2	2158	10	13649	0	-132	0	3prime_fragment	FALSE	canonical	3	15	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTAGTCTTTTTTTTT	NA	False	NA	5	True	AATAAA	-17	NA	74459640	74461314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_74459992_74460152_74460261_74460535
Isoform_54759_6	chr15	+	814	2	FSM	ENSMUSG00000034730.18	ENSMUST00000230935.2	752	2	452	-514	452	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTAGTCTTTTTTTT	NA	False	NA	4	True	AATAAA	-16	NA	74460224	74461313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_74460261_74460535
Isoform_54761_120	chr15	+	1507	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	11	266	11	-266	multi-exon	FALSE	canonical	3	79	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGTGCCGGGGAGGTTC	4651	False	NA	13	True	ATTAAA	-14	NA	74593063	74596222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_74593657_74595308
Isoform_54763_3	chr15	+	1564	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	11	209	11	-209	multi-exon	FALSE	canonical	3	79	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCCTGGATGTGTCTT	4651	False	NA	70	True	NA	NA	NA	74593063	74596279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_74593657_74595308
Isoform_54765_17	chr15	+	1233	3	ISM	ENSMUSG00000022587.15	ENSMUST00000191127.7	575	5	389	-671	-4	0	intron_retention	FALSE	canonical	3	397	junction_1	126.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8383	False	NA	27	True	AATAAA	-15	NA	74827497	74831180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_74827567_74829625_74829727_74830117
Isoform_54766_96	chr15	+	1166	4	FSM	ENSMUSG00000022587.15	ENSMUST00000051698.14	2281	4	549	566	-33	8	multi-exon	FALSE	canonical	3	397	junction_1	104.416899441081	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGTTGTCCTTAACC	8354	False	NA	35	True	AATAAA	-23	NA	74827468	74831188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
Isoform_54767_218	chr15	+	1129	4	FSM	ENSMUSG00000022587.15	ENSMUST00000190810.7	924	4	471	-676	-4	0	multi-exon	FALSE	canonical	3	397	junction_1	104.416899441081	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8383	False	NA	27	True	AATAAA	-15	NA	74827497	74831180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
Isoform_54769_161	chr15	+	1127	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8382	False	NA	27	True	AATAAA	-15	NA	74827496	74831180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
Isoform_5477_495	chr10	+	1767	11	FSM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	7	0	-1	0	multi-exon	FALSE	canonical	3	353	junction_4	21.6323831327018	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601770	7638913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
Isoform_54770_64	chr15	+	1155	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	-33	0	-33	0	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8354	False	NA	27	True	AATAAA	-15	NA	74827468	74831180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
Isoform_54772_147	chr15	+	3515	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	19	6	14	-6	multi-exon	FALSE	canonical	3	54	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGCTTCCTGTGCTCTGT	NA	False	NA	11	True	AGTAAA	-11	NA	75488546	75497143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75488670_75489892_75491541_75495399
Isoform_54773_6	chr15	+	5688	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	4	-2152	-1	2152	multi-exon	FALSE	canonical	3	54	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGGTCTGTGGTCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	75488531	75499301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75488670_75489892_75491541_75495399
Isoform_54775_3	chr15	+	8098	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	-46	-4512	-46	-15	multi-exon	FALSE	canonical	3	54	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGAAAAAAGTAAG	NA	False	NA	NA	False	AATAAA	-12	NA	75488481	75501661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75488670_75489892_75491541_75495399
Isoform_54776_11	chr15	+	8041	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	26	-4527	21	0	multi-exon	FALSE	canonical	3	54	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCCCAGTCTCTCT	NA	False	NA	NA	False	AATAAA	-27	NA	75488553	75501676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75488670_75489892_75491541_75495399
Isoform_54777_4	chr15	+	4263	3	NNC	ENSMUSG00000047003.16	novel	3540	3	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	26.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGCTTCCTGTGCTCTG	NA	False	NA	10	True	AGTAAA	-10	NA	75488541	75497142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_75488670_75489892_75492285_75495399
Isoform_54778_9	chr15	+	3723	3	FSM	ENSMUSG00000047003.16	ENSMUST00000054555.10	8270	3	14	4533	14	-6	multi-exon	FALSE	canonical	2	8	junction_1	23	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGCTTCCTGTGCTCTGT	NA	False	NA	11	True	AGTAAA	-11	NA	75488546	75497143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75488878_75489892_75491541_75495399
Isoform_54781_7	chr15	+	1118	3	FSM	ENSMUSG00000099034.8	ENSMUST00000183928.8	1459	3	337	4	-9	-4	multi-exon	FALSE	canonical	2	3	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGATGGAGTCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	75514314	75519282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75514361_75517197_75517294_75518306
Isoform_54782_12	chr15	+	2300	15	FSM	ENSMUSG00000022580.14	ENSMUST00000121137.9	3360	15	-20	1080	-20	0	multi-exon	FALSE	canonical	1	1	junction_2	2.36578502309703	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGAGTCTGAGTCGGG	NA	False	NA	NA	False	ATTAAA	-14	NA	75576108	75586254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75576324_75580019_75580136_75580837_75580967_75581085_75581162_75581862_75581941_75582303_75582429_75582514_75582682_75582836_75583031_75583402_75583560_75583639_75583748_75584105_75584301_75584850_75584928_75585067_75585215_75585298_75585461_75585900
Isoform_54783_21	chr15	+	1798	11	FSM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	-10	4	-10	-4	multi-exon	FALSE	canonical	3	30	junction_2	7.7614431647729	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTGTGTTGAGGGGT	NA	False	NA	11	True	AATAAA	-16	NA	75734165	75739253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
Isoform_54784_15	chr15	+	1848	11	FSM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	-59	3	-59	-3	multi-exon	FALSE	canonical	3	30	junction_2	7.7614431647729	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTGTGTTGAGGGGTA	NA	False	NA	12	True	AATAAA	-17	NA	75734116	75739254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
Isoform_54786_13	chr15	+	2915	9	NIC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	41	junction_1	5.42995165724337	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGCATAATGCTGTG	NA	False	NA	2	True	AATAAA	-7	NA	75734166	75739244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_75734331_75735253_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
Isoform_54788_223	chr15	+	2395	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	92	-1	92	1	multi-exon	FALSE	canonical	3	106	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTGTAATTGGCATAT	NA	False	NA	11	True	AATAAA	-17	NA	75812892	75821250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75813009_75818971
Isoform_5479_14	chr10	+	1838	11	FSM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	-64	0	-64	0	multi-exon	TRUE	canonical	3	353	junction_4	21.6323831327018	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601699	7638913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
Isoform_54790_16	chr15	+	2458	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	29	-1	29	1	multi-exon	FALSE	canonical	3	106	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTGTAATTGGCATAT	NA	False	NA	11	True	AATAAA	-17	NA	75812829	75821250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75813009_75818971
Isoform_54791_3	chr15	+	2525	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	-38	-1	-38	1	multi-exon	FALSE	canonical	3	106	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTGTAATTGGCATAT	NA	False	NA	11	True	AATAAA	-17	NA	75812762	75821250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75813009_75818971
Isoform_54792_71	chr15	+	1631	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	172	0	-12	0	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCTGTTCTTCAGCC	NA	False	NA	11	True	AATAAA	-16	NA	75841143	75847598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
Isoform_54793_30	chr15	+	1773	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	26	4	-9	1	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGAGAAGCCTGTTCTTC	NA	False	NA	7	True	AATAAA	-12	NA	75840997	75847594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
Isoform_54795_7	chr15	+	1584	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109967.10	1703	4	118	1	-10	1	multi-exon	FALSE	canonical	1	1	junction_1	16.779617264871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGAGAAGCCTGTTCTTC	NA	False	NA	7	True	AATAAA	-12	NA	75841145	75847594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75841254_75844971_75845058_75845390_75845505_75846318
Isoform_54796_4	chr15	+	2053	7	NIC	ENSMUSG00000022564.8	novel	1725	7	NA	NA	-2	4	intron_retention	FALSE	canonical	1	1	junction_1	34.2425985514469	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTCTCCTTGTCTCTCT	NA	False	NA	17	True	AATAAA	-18	NA	76130972	76134108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76131101_76131728_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
Isoform_54797_17	chr15	+	1957	7	NIC	ENSMUSG00000022564.8	novel	1725	7	NA	NA	-9	1	intron_retention	FALSE	canonical	3	13	junction_1	29.8533452434099	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTTCTCCTTGTCTC	NA	False	NA	14	True	AATAAA	-15	NA	76130954	76134105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76131101_76131839_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
Isoform_54799_135	chr15	+	1719	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	17	-11	17	11	multi-exon	FALSE	canonical	3	70	junction_1	10.0567832276971	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTCTCTCTTCACTGC	NA	False	NA	24	True	AATAAA	-25	NA	76130991	76134115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
Isoform_54803_177	chr15	+	1729	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	68	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	330.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTAATGTCTTCTTTC	947	False	NA	9	True	NA	NA	NA	76211664	76214878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76211864_76213229_76213437_76213555
Isoform_54804_193	chr15	+	826	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	54	916	-14	666	multi-exon	FALSE	canonical	0	0	junction_1	330.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACCTTACTGTACAGCAC	933	False	NA	14	True	AATAAA	-20	NA	76211650	76213961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76211864_76213229_76213437_76213555
Isoform_54806_397	chr15	+	793	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	86	917	18	665	multi-exon	FALSE	canonical	0	0	junction_1	330.5	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACCTTACTGTACAGCA	965	False	NA	13	True	AATAAA	-19	NA	76211682	76213960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76211864_76213229_76213437_76213555
Isoform_54808_13	chr15	+	807	3	FSM	ENSMUSG00000034259.9	ENSMUST00000230512.2	1728	3	11	910	11	668	multi-exon	FALSE	canonical	3	25	junction_1	318	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTACTGTACAGCACTT	958	False	NA	16	True	AATAAA	-22	NA	76211675	76213963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76211868_76213229_76213437_76213555
Isoform_54809_11	chr15	+	1730	3	FSM	ENSMUSG00000034259.9	ENSMUST00000230512.2	1728	3	1	-3	1	-1	multi-exon	FALSE	canonical	3	25	junction_1	318	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGACTAATGTCTTCTT	948	False	NA	7	True	NA	NA	NA	76211665	76214876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76211868_76213229_76213437_76213555
Isoform_5481_8	chr10	+	2677	10	NIC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	353	junction_4	22.572243416185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGTTTCAATTTAGCA	NA	False	NA	8	True	AATAAA	-17	NA	7601770	7638912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7636634_7637006_7637134_7638553
Isoform_54813_889	chr15	+	1989	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	111	7	-2	2	multi-exon	FALSE	non_canonical	3	197	junction_6	31.5777932223483	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4824	False	NA	17	True	AATAAA	-20	NA	76215541	76219100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_54814_40	chr15	+	2082	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	18	7	18	2	multi-exon	TRUE	non_canonical	3	197	junction_6	31.5777932223483	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4731	False	NA	17	True	AATAAA	-20	NA	76215448	76219100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_54817_48	chr15	+	2113	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-49	2	intron_retention	FALSE	non_canonical	3	245	junction_2	20.9035882087263	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4777	False	NA	17	True	AATAAA	-20	NA	76215494	76219100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_54819_18	chr15	+	2280	10	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-39	2	intron_retention	FALSE	canonical	3	245	junction_2	21.6800528449085	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4787	False	NA	17	True	AATAAA	-20	NA	76215504	76219100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217574_76217663_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_54820_12	chr15	+	2119	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-39	2	intron_retention	FALSE	non_canonical	1	1	junction_3	85.5794367824421	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4787	False	NA	17	True	AATAAA	-20	NA	76215504	76219100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76215664_76216095_76216276_76216359_76216488_76216683_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_54824_36	chr15	+	2327	10	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-51	2	intron_retention	FALSE	non_canonical	3	245	junction_2	19.9208309609022	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4775	False	NA	17	True	AATAAA	-20	NA	76215492	76219100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_54825_15	chr15	+	2468	9	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-15	2	intron_retention	FALSE	canonical	3	245	junction_2	20.9030500166842	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4811	False	NA	17	True	AATAAA	-20	NA	76215528	76219100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_54827_30	chr15	+	2277	11	ISM	ENSMUSG00000022561.14	ENSMUST00000164972.8	2237	12	142	-2	-27	2	3prime_fragment	FALSE	non_canonical	3	197	junction_5	30.9497980607305	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4968	False	NA	17	True	AATAAA	-20	NA	76215685	76219100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_54836_93	chr15	+	1200	7	NIC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	1700.84897102071	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	28	True	AATAAA	-18	NA	76227739	76230135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76227893_76228479_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
Isoform_54838_6977	chr15	+	1178	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	17	325	7	3	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	6977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	28	True	AATAAA	-18	NA	76227739	76230135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
Isoform_54841_95	chr15	+	1208	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	-13	325	-13	3	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	28	True	AATAAA	-18	NA	76227709	76230135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
Isoform_54850_167	chr15	+	1793	6	FSM	ENSMUSG00000022551.9	ENSMUST00000229710.2	1791	6	1	-3	1	3	multi-exon	FALSE	canonical	3	4240	junction_4	274.648866737149	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	28	True	AATAAA	-18	NA	76227733	76230135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
Isoform_54864_43	chr15	+	1725	9	FSM	ENSMUSG00000022553.17	ENSMUST00000161527.8	1743	9	19	-1	4	0	multi-exon	FALSE	canonical	3	22	junction_1	277.590075471008	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235512	76238573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76235860_76236195_76236242_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_54866_899	chr15	+	1679	8	FSM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	7	0	4	0	multi-exon	FALSE	canonical	3	425	junction_1	86.5157765487702	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235512	76238573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_54869_29	chr15	+	1664	8	NIC	ENSMUSG00000022553.17	novel	1686	8	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	221.621114443879	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAACCTGGGAGTTT	NA	False	NA	22	True	AATAAA	-14	NA	76235521	76238571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76235860_76236623_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_54870_383	chr15	+	1632	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	19	0	4	0	multi-exon	FALSE	canonical	3	203	junction_1	163.413086179455	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235512	76238573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_54874_44	chr15	+	2426	7	NIC	ENSMUSG00000022553.17	novel	1686	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	633	junction_2	18.2094297915485	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235525	76238573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_54881_16	chr15	+	1970	6	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	7	13	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	27.9184526791869	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGAGATTCTCCTGCGTG	3551	False	NA	NA	False	NA	NA	NA	76253104	76255650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76253741_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
Isoform_54883_17	chr15	+	2312	6	NNC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	22	422	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	42.1454623892063	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTGTAGACTAGTGTTTT	3566	False	NA	NA	False	NA	NA	NA	76253119	76256059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_76253741_76253851_76253901_76254055_76254155_76254361_76254454_76254531_76254655_76254731
Isoform_54887_46	chr15	+	1987	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	22	-16	22	16	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTCTCCTGCGTGTTC	3566	False	NA	NA	False	NA	NA	NA	76253119	76255653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
Isoform_54891_30	chr15	+	2402	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	8	-417	8	417	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCACCGTGTAGACTAGT	3552	False	NA	NA	False	NA	NA	NA	76253105	76256054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
Isoform_54897_157	chr15	+	5248	44	FSM	ENSMUSG00000022558.17	ENSMUST00000096385.11	5268	44	19	1	0	0	multi-exon	FALSE	canonical	3	62	junction_5	19.8740490552834	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264731	76337237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
Isoform_54898_4	chr15	+	5222	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_23	23.3758723023482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264731	76337238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
Isoform_54899_3	chr15	+	5499	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	4	0	intron_retention	FALSE	canonical	3	62	junction_5	19.7753970005816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264726	76337238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
Isoform_5490_367	chr10	+	2878	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	20	573	3	-573	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGCTTACTTTTTTCT	1142	False	NA	9	True	AGTAAA	-14	NA	7668674	7698326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
Isoform_54900_4	chr15	+	5250	44	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	23.724327162154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGGTGACATTGTATC	NA	False	NA	7	True	AATAAA	-13	NA	76264731	76337235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76264777_76274230_76274332_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
Isoform_54901_4	chr15	+	5165	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	23.574843427484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264718	76337238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76264777_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
Isoform_54906_11	chr15	+	2201	14	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	103.530403161092	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7111	False	NA	12	True	NA	NA	NA	76361611	76385172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384397_76384466_76384537_76384616
Isoform_54907_29	chr15	+	2176	14	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	103.530403161092	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATATAT	7137	False	NA	13	True	NA	NA	NA	76361637	76385173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384397_76384466_76384537_76384616
Isoform_54913_506	chr15	+	2094	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-10	0	0	0	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7134	False	NA	12	True	NA	NA	NA	76361634	76385172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
Isoform_54914_33	chr15	+	2170	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-84	-2	-61	2	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATATATA	7060	False	NA	14	True	NA	NA	NA	76361560	76385174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
Isoform_54918_59	chr15	+	2165	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	4	-1	intron_retention	FALSE	canonical	3	226	junction_10	34.6941774713456	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATATATATAT	7138	False	NA	17	True	NA	NA	NA	76361638	76385177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
Isoform_54919_30	chr15	+	2049	12	FSM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	-29	-2	-6	2	multi-exon	FALSE	canonical	3	46	junction_10	77.0148638653497	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATATATA	7115	False	NA	14	True	NA	NA	NA	76361615	76385174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
Isoform_5492_24	chr10	+	3436	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	38	-3	8	3	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATGTGTTCTCTCTGTT	1160	False	NA	17	True	NA	NA	NA	7668692	7698902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
Isoform_54920_52	chr15	+	2026	12	FSM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	-6	-2	4	2	multi-exon	FALSE	canonical	3	46	junction_10	77.0148638653497	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATATATA	7138	False	NA	14	True	NA	NA	NA	76361638	76385174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
Isoform_54923_11	chr15	+	2228	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	1	2	intron_retention	FALSE	canonical	3	262	junction_4	29.8745711266287	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATATATA	7149	False	NA	14	True	NA	NA	NA	76361649	76385174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384537_76384616
Isoform_54928_11	chr15	+	2214	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	4	2	intron_retention	FALSE	canonical	3	205	junction_10	42.1345738562714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATATATA	7138	False	NA	14	True	NA	NA	NA	76361638	76385174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
Isoform_54931_23	chr15	+	2242	3	FSM	ENSMUSG00000022560.10	ENSMUST00000230994.2	2889	3	-94	741	38	-741	multi-exon	FALSE	canonical	3	120	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTTGTTAATCCCATGA	NA	False	NA	4	True	AATAAA	-14	NA	76423069	76425589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76423396_76423582_76423803_76423893
Isoform_54932_27	chr15	+	2190	4	ISM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	-2	3219	-2	-741	intron_retention	FALSE	canonical	3	120	junction_1	1.69967317119759	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTTGTTAATCCCATGA	NA	False	NA	4	True	AATAAA	-14	NA	76423029	76425589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871
Isoform_54933_376	chr15	+	2069	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	1	3219	1	-741	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTTGTTAATCCCATGA	NA	False	NA	4	True	AATAAA	-14	NA	76423032	76425589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
Isoform_54934_9	chr15	+	2812	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	0	2477	0	1	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACAATGTGTCCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	76423031	76426331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
Isoform_54936_6	chr15	+	2170	4	NIC	ENSMUSG00000022560.10	novel	5289	5	NA	NA	0	-733	intron_retention	FALSE	canonical	3	110	junction_3	4.96655480858378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCCCATGAGCACAGCT	NA	False	NA	12	True	AATAAA	-22	NA	76423031	76425597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76423396_76423582_76423803_76423893_76424996_76425113
Isoform_54940_330	chr15	+	1980	15	FSM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	54	6	0	1	multi-exon	FALSE	canonical	3	114	junction_10	17.9268638913668	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATCGTTTTCTTTGTG	3156	False	NA	NA	False	NA	NA	NA	76460611	76480010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
Isoform_54942_7	chr15	+	2104	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	0	1	intron_retention	FALSE	canonical	3	114	junction_10	18.314155291022	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATCGTTTTCTTTGTG	3102	False	NA	NA	False	NA	NA	NA	76460557	76480010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479654_76479738
Isoform_54944_11	chr15	+	2083	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	-7	1	intron_retention	FALSE	canonical	3	116	junction_9	17.5296874138817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATCGTTTTCTTTGTG	3116	False	NA	NA	False	NA	NA	NA	76460571	76480010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
Isoform_54946_11	chr15	+	2058	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	0	1	intron_retention	FALSE	canonical	3	114	junction_9	18.1199161407206	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATCGTTTTCTTTGTG	3156	False	NA	NA	False	NA	NA	NA	76460611	76480010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
Isoform_54949_12	chr15	+	1937	15	FSM	ENSMUSG00000022550.19	ENSMUST00000161732.8	2026	15	82	7	28	-7	multi-exon	FALSE	canonical	2	13	junction_4	36.3298381892508	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTCTGAAAGAAATCGTT	3185	False	NA	NA	False	NA	NA	NA	76460640	76480001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
Isoform_54950_7	chr15	+	2047	14	NIC	ENSMUSG00000022550.19	novel	2026	15	NA	NA	-2	1	intron_retention	FALSE	canonical	2	13	junction_4	37.4853028398342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATCGTTTTCTTTGTG	3147	False	NA	NA	False	NA	NA	NA	76460602	76480010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
Isoform_54954_87	chr15	+	2802	12	FSM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	25	0	25	0	multi-exon	TRUE	canonical	3	37	junction_1	32.5360575565374	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555871	76579119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
Isoform_54957_40	chr15	+	2675	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	15	2	15	2	multi-exon	FALSE	canonical	3	82	junction_1	16.1864140562386	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCCCATGTGTCTCA	NA	False	NA	20	True	GATAAA	-15	NA	76555829	76579117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
Isoform_54958_251	chr15	+	2611	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	81	0	49	0	multi-exon	FALSE	canonical	3	82	junction_1	16.1864140562386	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555895	76579119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
Isoform_54964_11	chr15	+	1042	6	FSM	ENSMUSG00000022546.6	ENSMUST00000229140.2	982	6	-33	-27	-33	0	multi-exon	FALSE	canonical	3	10	junction_4	4.40908153700972	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGACTCACCTGACTGG	5956	False	NA	29	True	AATAAA	-45	NA	76582377	76583875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76582583_76582655_76582793_76582914_76583090_76583195_76583352_76583435_76583549_76583619
Isoform_54967_26	chr15	+	1579	5	FSM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	2	665	2	84	multi-exon	FALSE	canonical	3	46	junction_1	6.01560470775798	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCAGTTTGGATCTTCT	9245	False	NA	16	True	CATAAA	-19	NA	76585666	76587774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587462
Isoform_54969_3	chr15	+	1498	5	NIC	ENSMUSG00000019080.9	novel	2246	5	NA	NA	8	23	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	22.7870577302117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCCTCAAACTGAAGGC	9251	False	NA	27	True	AATAAA	-40	NA	76585672	76587713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587476
Isoform_5497_6	chr10	+	3680	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	8	-217	8	217	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCTGTGGGGTTTTTTT	1130	False	NA	NA	False	NA	NA	NA	7668662	7699116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
Isoform_54970_3	chr15	+	1879	4	NIC	ENSMUSG00000019080.9	novel	2246	5	NA	NA	0	89	intron_retention	FALSE	canonical	3	51	junction_2	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGGATCTTCTTATCC	9243	False	NA	21	True	CATAAA	-24	NA	76585664	76587779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76586992_76587078_76587204_76587273_76587384_76587462
Isoform_54971_3	chr15	+	2311	5	NIC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	44.5890962007529	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCTAGTGTTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	76594848	76599288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76595037_76595555_76595731_76597066_76597421_76597600_76598186_76598279
Isoform_54972_5	chr15	+	2158	4	FSM	ENSMUSG00000033728.15	ENSMUST00000036423.15	2093	4	-5	-60	-4	4	multi-exon	FALSE	canonical	3	5	junction_1	47.8957200593122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTGCTTTATCATGAC	NA	False	NA	NA	False	NA	NA	NA	76594833	76599295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76595037_76597066_76597421_76597600_76598186_76598279
Isoform_54973_10	chr15	+	2418	5	NIC	ENSMUSG00000033728.15	novel	2832	4	NA	NA	-1	6	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	41.7282877674126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGCTTTATCATGACCA	NA	False	NA	NA	False	NA	NA	NA	76594841	76599297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76595128_76595555_76595731_76597066_76597421_76597600_76598186_76598279
Isoform_54975_3	chr15	+	2352	5	NIC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	42.9796463456832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTGCTTTATCATGAC	NA	False	NA	NA	False	NA	NA	NA	76594839	76599295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76595128_76595621_76595731_76597066_76597421_76597600_76598186_76598279
Isoform_54976_62	chr15	+	2228	4	FSM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	12	2609	1	-1	multi-exon	FALSE	canonical	3	39	junction_1	34.1792659696229	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGTGTTGCTTTATC	NA	False	NA	NA	False	NA	NA	NA	76594849	76599290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76595128_76597066_76597421_76597600_76598186_76598279
Isoform_54977_7	chr15	+	2293	4	FSM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	6	2550	1	19	multi-exon	FALSE	canonical	3	39	junction_1	34.1792659696229	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGGCTATCCCACTAT	NA	False	NA	NA	False	AATATA	-16	NA	76594843	76599349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76595128_76597066_76597421_76597600_76598186_76598279
Isoform_54978_11	chr15	+	2435	3	FSM	ENSMUSG00000033728.15	ENSMUST00000142506.2	3943	3	-49	1557	1	0	multi-exon	FALSE	canonical	3	39	junction_1	41.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTGTTGCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	76594823	76599291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76595128_76597066_76598186_76598279
Isoform_54979_3	chr15	+	2528	5	NIC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	-2	5	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	44.2634160453077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTTTATCATGACC	NA	False	NA	NA	False	NA	NA	NA	76594820	76599296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76595284_76595621_76595731_76597066_76597421_76597600_76598186_76598279
Isoform_54981_13	chr15	+	2873	4	FSM	ENSMUSG00000033728.15	ENSMUST00000137649.8	2832	4	7	-48	1	2	multi-exon	FALSE	canonical	3	40	junction_1	33.8066397160216	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCCCCTAGTCTATAA	NA	False	NA	NA	False	NA	NA	NA	76594849	76599332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76595731_76597066_76597421_76597600_76598186_76598279
Isoform_54982_32	chr15	+	2858	4	FSM	ENSMUSG00000033728.15	ENSMUST00000137649.8	2832	4	-22	-4	-2	-3	multi-exon	FALSE	canonical	3	40	junction_1	33.8066397160216	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCTAGTGTTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	76594820	76599288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76595731_76597066_76597421_76597600_76598186_76598279
Isoform_54983_4	chr15	+	3024	3	NIC	ENSMUSG00000033728.15	novel	2832	4	NA	NA	-1	4	intron_retention	FALSE	canonical	3	40	junction_1	41	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTGCTTTATCATGAC	NA	False	NA	NA	False	NA	NA	NA	76594841	76599295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76595731_76597066_76598186_76598279
Isoform_54985_176	chr15	+	2709	5	FSM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	61	2	-2	-2	multi-exon	FALSE	canonical	3	69	junction_1	13.4976849866931	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTAGCCTGTACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	76763519	76776593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76774206
Isoform_54986_19	chr15	+	2789	5	FSM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	-21	4	-21	2	multi-exon	FALSE	canonical	3	69	junction_1	13.4976849866931	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTAGCCTGTACTT	NA	False	NA	NA	False	AATAAA	-15	NA	76763437	76776591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76774206
Isoform_54987_6	chr15	+	2755	5	NNC	ENSMUSG00000033669.9	novel	2772	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	38.4341970125564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTAGCCTGTACTT	NA	False	NA	NA	False	AATAAA	-15	NA	76763521	76776591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772598_76774206
Isoform_54988_31	chr15	+	2717	5	NNC	ENSMUSG00000033669.9	novel	2772	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	34.1055347414463	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTAGCCTGTACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	76763508	76776593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_76763554_76764938_76764983_76765311_76765439_76772433_76772548_76774206
Isoform_5499_12	chr10	+	3418	12	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	2	-573	intron_retention	FALSE	canonical	3	182	junction_11	34.8541233910046	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGCTTACTTTTTTCT	1141	False	NA	9	True	AGTAAA	-14	NA	7668673	7698326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
Isoform_54990_4	chr15	+	2758	5	NNC	ENSMUSG00000033669.9	novel	2772	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	32.4143101114307	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	76763466	76776595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_76763554_76764938_76764983_76765314_76765439_76772433_76772548_76774206
Isoform_54991_46	chr15	+	2951	5	FSM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	13	-4	0	-2	multi-exon	FALSE	canonical	3	16	junction_1	32.962099447699	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTAGCCTGTACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	76763521	76776593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76763798_76764938_76764983_76765311_76765439_76772430_76772548_76774206
Isoform_54992_4	chr15	+	2991	5	NNC	ENSMUSG00000033669.9	novel	2960	5	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	39.8810732052185	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGTGTAGCCTGTACT	NA	False	NA	NA	False	AATAAA	-14	NA	76763475	76776590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_76763798_76764938_76764983_76765311_76765439_76772433_76772548_76774206
Isoform_54993_5	chr15	+	2905	5	NNC	ENSMUSG00000033669.9	novel	2960	5	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	39.8810732052185	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTAGCCTGTACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	76763564	76776593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_76763798_76764938_76764983_76765311_76765439_76772433_76772548_76774206
Isoform_54997_113	chr15	+	1020	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	11	6	11	4	multi-exon	TRUE	canonical	3	114	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACATGTTATTCTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	76784120	76785499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76784193_76784551
Isoform_54998_4	chr15	+	1348	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	20	-331	-6	331	multi-exon	FALSE	canonical	3	114	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACAGGGCCGGAGGAT	NA	False	NA	39	True	ATTAAA	-24	NA	76784129	76785836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76784193_76784551
Isoform_54999_69	chr15	+	1044	2	FSM	ENSMUSG00000055041.9	ENSMUST00000109793.3	920	2	-14	-110	12	-4	multi-exon	FALSE	canonical	3	59	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTTATTCTATTAG	NA	False	NA	NA	False	ATTAAA	-19	NA	76784121	76785501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76784216_76784551
Isoform_55000_6120	chr15	+	843	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	7	1	7	-1	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	6120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGCGTGTGTGAGCCTC	NA	False	NA	33	True	AATAAA	-17	NA	76788284	76790513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
Isoform_55001_321	chr15	+	879	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	-29	1	-29	-1	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGCGTGTGTGAGCCTC	NA	False	NA	33	True	AATAAA	-17	NA	76788248	76790513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
Isoform_55006_78	chr15	+	1015	5	FSM	ENSMUSG00000003970.10	ENSMUST00000229183.2	1020	5	4	1	4	-1	multi-exon	FALSE	canonical	3	10804	junction_2	302.309754225695	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGCGTGTGTGAGCCTC	NA	False	NA	33	True	AATAAA	-17	NA	76788305	76790513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
Isoform_55014_8	chr15	+	1245	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	-201	-1	-201	1	multi-exon	TRUE	canonical	1	74	junction_2	101.489839392917	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGATGGTGTGAGAGAG	NA	False	NA	22	True	AATAAA	-14	NA	76832504	76834930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
Isoform_55015_117	chr15	+	1027	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	17	-1	1	1	multi-exon	FALSE	canonical	1	74	junction_2	101.489839392917	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGATGGTGTGAGAGAG	NA	False	NA	22	True	AATAAA	-14	NA	76832722	76834930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
Isoform_55016_3	chr15	+	1408	4	NIC	ENSMUSG00000063236.7	novel	1043	5	NA	NA	-3	-6	intron_retention	FALSE	canonical	1	74	junction_2	91.5435536901546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGAAATAGGATGGTGT	NA	False	NA	15	True	AATAAA	-7	NA	76832725	76834923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_76832745_76832828_76833120_76833267_76833891_76834448
Isoform_55017_60	chr15	+	1099	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	13	-1	6	1	multi-exon	FALSE	canonical	1	74	junction_1	105.909814884594	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGATGGTGTGAGAGAG	NA	False	NA	22	True	AATAAA	-14	NA	76832734	76834930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
Isoform_55020_60	chr15	+	1257	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	57	-3	57	3	multi-exon	FALSE	canonical	3	16	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTGTGGTTGTGAG	NA	False	NA	NA	False	AATAAA	-13	NA	78294238	78298209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78294865_78297578
Isoform_55022_17	chr15	+	4228	5	FSM	ENSMUSG00000033287.18	ENSMUST00000161016.8	750	5	-30	-3448	-1	5	multi-exon	FALSE	canonical	3	98	junction_2	15.305227865014	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGGGCCACTTCTTC	NA	False	NA	29	True	AATAAA	-36	NA	78312860	78323508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784
Isoform_55023_119	chr15	+	3032	6	ISM	ENSMUSG00000033287.18	ENSMUST00000089414.12	1180	7	33	-393	-1	-1	intron_retention	FALSE	canonical	3	64	junction_5	26.081411004775	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTTTCTCTGGGCCAC	NA	False	NA	23	True	AATAAA	-30	NA	78312860	78323502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100
Isoform_55024_20	chr15	+	2848	7	NIC	ENSMUSG00000033287.18	novel	1180	7	NA	NA	-1	-22	intron_retention	FALSE	canonical	2	11	junction_6	43.4105082004602	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTTGGCCTGGCTGC	NA	False	NA	2	True	AATAAA	-9	NA	78312860	78323481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321357
Isoform_55025_15	chr15	+	2776	6	ISM	ENSMUSG00000033287.18	ENSMUST00000162517.9	901	8	97	-806	-1	0	intron_retention	FALSE	canonical	1	3	junction_5	48.5691259958423	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	24	True	AATAAA	-31	NA	78312860	78323503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321357
Isoform_55026_6	chr15	+	1536	7	FSM	ENSMUSG00000033287.18	ENSMUST00000166142.11	1632	7	96	0	-2	0	multi-exon	FALSE	canonical	2	4	junction_5	55.6339724349151	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	24	True	AATAAA	-31	NA	78312859	78323503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321783_78321872_78322686
Isoform_55027_77	chr15	+	1448	6	FSM	ENSMUSG00000033287.18	ENSMUST00000159771.8	986	6	-2	-460	-2	0	multi-exon	FALSE	canonical	3	32	junction_5	37.5819105421744	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	24	True	AATAAA	-31	NA	78312859	78323503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78322686
Isoform_55028_94	chr15	+	2577	3	FSM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	20	junction_1	1.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGACCTTGGGGAAAAGC	NA	False	NA	NA	False	AATAAA	-20	NA	78726806	78735097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78726926_78731294_78732020_78733364
Isoform_55033_2001	chr15	+	2673	17	FSM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	361	0	0	0	multi-exon	FALSE	canonical	3	379	junction_6	54.6157028701453	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761750	78778785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
Isoform_55034_115	chr15	+	3031	17	FSM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	1	2	1	-2	multi-exon	TRUE	canonical	3	379	junction_6	54.6157028701453	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	NA	False	NA	16	True	AATAAA	-16	NA	78761390	78778783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
Isoform_5504_3	chr10	+	4175	21	ISM	ENSMUSG00000090112.9	ENSMUST00000054814.14	7225	28	-42	21336	9	66	5prime_fragment	FALSE	canonical	3	71	junction_8	10.2640148090306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGCTTTGGAGACTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	11025225	11063960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683
Isoform_55062_1498	chr15	+	2460	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	-88	3	47	-3	multi-exon	FALSE	canonical	3	356	junction_17	50.4832700370451	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAGTAACTGGCCAA	4445	False	NA	80	True	AATAAA	-13	NA	78784014	78796244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
Isoform_55063_119	chr15	+	2514	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	-142	3	-7	-3	multi-exon	FALSE	canonical	3	356	junction_17	50.4832700370451	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAGTAACTGGCCAA	4391	False	NA	80	True	AATAAA	-13	NA	78783960	78796244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
Isoform_55068_24	chr15	+	1914	18	FSM	ENSMUSG00000022436.17	ENSMUST00000109698.9	1923	18	2	7	2	-3	multi-exon	FALSE	canonical	3	8	junction_17	114.336569876277	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAGTAACTGGCCAA	4400	False	NA	80	True	AATAAA	-13	NA	78783969	78796244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78796129
Isoform_55080_1040	chr15	+	1997	2	FSM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	4	0	4	0	multi-exon	FALSE	canonical	3	228	junction_1	0	1040	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTGTGTGTGTGCC	NA	False	NA	24	True	AATAAA	-18	NA	78798122	78803717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78798732_78802329
Isoform_55086_703	chr15	+	529	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	1	270	0	4	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	703	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGCCCTTTCATGGGAG	NA	False	NA	13	True	AATAAA	-24	NA	78810925	78814395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
Isoform_55089_7	chr15	+	1957	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	43	1721	-19	1053	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGGCTGAAGTTCAGGC	NA	False	NA	NA	False	NA	NA	NA	78819175	78826117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
Isoform_55090_580	chr15	+	944	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	3	2774	3	0	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTGCTTGTGCT	NA	False	NA	10	True	NA	NA	NA	78819135	78825064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
Isoform_55091_13	chr15	+	1401	7	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	219.064424821152	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	78819389	78825065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_78819895_78820008_78820100_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
Isoform_55092_51	chr15	+	1310	6	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	182.547528057764	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	78819389	78825065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_78819895_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
Isoform_55096_28	chr15	+	1680	8	FSM	ENSMUSG00000033088.20	ENSMUST00000130663.10	1660	8	-15	-5	-15	5	multi-exon	FALSE	canonical	3	19	junction_7	63.6226118191786	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAAATGGATTCTTCTC	NA	False	NA	NA	False	AATAAA	-30	NA	78867261	78879064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78878497
Isoform_55098_723	chr15	+	2543	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	32	-5	-4	0	multi-exon	FALSE	canonical	3	125	junction_8	26.3687999246734	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGATGCTGGGCTT	NA	False	NA	14	True	AATAAA	-18	NA	78867272	78890069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
Isoform_55099_19	chr15	+	2629	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	-54	-5	-54	0	multi-exon	FALSE	canonical	3	125	junction_8	26.3687999246734	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGATGCTGGGCTT	NA	False	NA	14	True	AATAAA	-18	NA	78867186	78890069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
Isoform_55102_28	chr15	+	1718	8	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	29	891	29	-891	intron_retention	FALSE	canonical	3	1189	junction_6	79.2711698371289	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCAGTCTGCTTTATTC	661	False	NA	14	True	NA	NA	NA	78915102	78921662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952
Isoform_55103_2130	chr15	+	1476	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	3	891	3	-891	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	2130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCAGTCTGCTTTATTC	635	False	NA	14	True	NA	NA	NA	78915076	78921662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
Isoform_55105_27	chr15	+	1718	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	20	632	20	-632	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGAATTGTTCCTAGAC	652	False	NA	NA	False	GATAAA	-13	NA	78915093	78921921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
Isoform_5511_5	chr10	+	5961	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	25	3285	-18	13	multi-exon	TRUE	canonical	3	69	junction_26	12.375515699268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTCATTTCTTGTGTTC	NA	False	NA	NA	False	TTTAAA	-15	NA	11025198	11090054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
Isoform_55118_2110	chr15	+	1887	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	50	5	-19	-5	multi-exon	FALSE	canonical	3	1651	junction_4	129.272537257102	2110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTGTGGTCTCATT	NA	False	NA	25	True	AGTAAA	-15	NA	78959428	78978600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
Isoform_5512_3	chr10	+	9242	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	25	4	-18	-4	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTTTGTGTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	11025198	11093335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
Isoform_55139_8	chr15	+	3140	16	FSM	ENSMUSG00000033039.11	ENSMUST00000040320.10	6712	16	-30	3602	-30	11	multi-exon	FALSE	canonical	3	16	junction_2	11.2514690398879	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAACCAGTTGTGACTTA	6001	False	NA	NA	False	NA	NA	NA	78993133	79017498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
Isoform_55144_2358	chr15	+	543	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	335	7	-7	3	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	2358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025543	79035967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
Isoform_55145_93	chr15	+	576	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	302	7	-40	3	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025510	79035967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
Isoform_55151_28	chr15	+	1820	13	FSM	ENSMUSG00000068206.14	ENSMUST00000163571.8	2054	13	215	19	6	-1	multi-exon	FALSE	canonical	3	17	junction_1	62.6245425798331	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGGCTCCTTGCAAT	4389	False	NA	17	True	AATAAA	-17	NA	79113587	79133665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
Isoform_55152_8	chr15	+	2042	13	FSM	ENSMUSG00000068206.14	ENSMUST00000163571.8	2054	13	-8	20	-8	-2	multi-exon	FALSE	canonical	3	17	junction_1	62.6245425798331	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4166	False	NA	16	True	AATAAA	-16	NA	79113364	79133664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
Isoform_55155_409	chr15	+	1949	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	27	1	-2	-1	multi-exon	FALSE	canonical	3	173	junction_9	26.1878894826512	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGGCTCCTTGCAAT	4410	False	NA	17	True	AATAAA	-17	NA	79113608	79133665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
Isoform_55157_14	chr15	+	2761	13	NNC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	66.9491411446032	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGGCTCCTTGCAAT	4410	False	NA	17	True	AATAAA	-17	NA	79113608	79133665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131826_79131849_79132497_79132920
Isoform_55158_6	chr15	+	2574	12	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	173	junction_8	27.3523081353398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGGCTCCTTGCAAT	4410	False	NA	17	True	AATAAA	-17	NA	79113608	79133665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
Isoform_55160_5	chr15	+	1918	12	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	66.3727266501476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4379	False	NA	18	True	AATAAA	-18	NA	79113577	79133666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
Isoform_55165_29	chr15	+	1975	3	FSM	ENSMUSG00000042622.15	ENSMUST00000096350.11	1958	3	-18	1	-18	-1	multi-exon	FALSE	canonical	3	18	junction_1	7	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTGTATGTCTTGGA	2247	False	NA	21	True	AATAAA	-22	NA	79231701	79243275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79231955_79241166_79241234_79241620
Isoform_55166_10	chr15	+	1990	3	FSM	ENSMUSG00000042622.15	ENSMUST00000163691.3	1902	3	-80	-8	-80	4	multi-exon	FALSE	canonical	3	16	junction_1	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTATGTCTTGGACTATT	2729	False	NA	26	True	AATAAA	-27	NA	79232183	79243280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79232447_79241166_79241234_79241620
Isoform_55168_246	chr15	+	1380	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	31	0	31	0	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	False	NA	11	True	AATAAA	-16	NA	79400642	79411940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
Isoform_55169_30	chr15	+	1494	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	-83	0	-83	0	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	False	NA	11	True	AATAAA	-16	NA	79400528	79411940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
Isoform_55171_4	chr15	+	1559	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	-148	0	-148	0	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	False	NA	11	True	AATAAA	-16	NA	79400463	79411940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
Isoform_55173_178	chr15	+	1110	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	37	0	37	0	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGTGTAGCAAAAATAG	9596	False	NA	NA	False	ATTAAA	-14	NA	79543436	79551861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
Isoform_55174_151	chr15	+	1132	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	14	1	14	-1	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCTGTGTAGCAAAAATA	9573	False	NA	NA	False	ATTAAA	-13	NA	79543413	79551860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
Isoform_55177_957	chr15	+	1013	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	21	535	1	185	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	957	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTATTGCTGTGTTTG	8199	False	NA	19	True	ATTAAA	-15	NA	79555082	79557066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
Isoform_55189_649	chr15	+	3402	12	FSM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	47	0	47	0	multi-exon	TRUE	canonical	3	199	junction_6	19.3826198026279	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATGTTCCCTGCCC	NA	False	NA	17	True	AATAAA	-18	NA	79575092	79605680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
Isoform_5519_39	chr10	+	3265	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-32	1827	-32	707	multi-exon	FALSE	canonical	3	746	junction_2	70.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAAGGGTTTGACTTTT	7560	False	NA	NA	False	AATAAA	-16	NA	11157041	11171969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_11157245_11165263_11167317_11170960
Isoform_55191_13	chr15	+	3225	12	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	65.8303605005803	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATGTTCCCTGCCC	NA	False	NA	17	True	AATAAA	-18	NA	79575095	79605680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_79575300_79578356_79578469_79591192_79591374_79592069_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
Isoform_55199_189	chr15	+	1936	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	219.175122618878	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGACAAGATTA	7501	False	NA	-9	True	NA	NA	NA	79775858	79792104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_5520_397	chr10	+	5009	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	45	6	45	-6	multi-exon	FALSE	canonical	3	746	junction_2	70.5	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCTAATTTTTGTTT	7637	False	NA	NA	False	AATAAA	-19	NA	11157118	11173790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_11157245_11165263_11167317_11170960
Isoform_55203_14	chr15	+	1842	8	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	278.410209758836	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGACAAGATT	7495	False	NA	-10	True	NA	NA	NA	79775852	79792103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_55207_703	chr15	+	1892	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	46	15	0	-3	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGACAAGATTA	8292	False	NA	-9	True	NA	NA	NA	79776649	79792104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_55208_35	chr15	+	2932	9	FSM	ENSMUSG00000009585.19	ENSMUST00000109620.10	2459	9	18	-491	15	484	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTGTTATTTTTATTT	8269	False	NA	29	True	NA	NA	NA	79776626	79793121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_55209_44	chr15	+	1937	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	1	15	1	-3	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGACAAGATTA	8247	False	NA	-9	True	NA	NA	NA	79776604	79792104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_5521_768	chr10	+	3191	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	45	1824	45	710	multi-exon	FALSE	canonical	3	746	junction_2	70.5	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGGTTTGACTTTTTGA	7637	False	NA	NA	False	AATAAA	-19	NA	11157118	11171972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_11157245_11165263_11167317_11170960
Isoform_55216_40	chr15	+	1816	8	FSM	ENSMUSG00000009585.19	ENSMUST00000175752.8	1977	8	-22	183	15	-3	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGACAAGATTA	8269	False	NA	-9	True	NA	NA	NA	79776626	79792104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_55223_47	chr15	+	3137	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	18	2	8	-2	intron_retention	FALSE	canonical	3	1445	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGCCTGTGTGGAT	NA	False	NA	16	True	NA	NA	NA	79975552	79997640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_79975694_79994644
Isoform_55224_29	chr15	+	3690	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	30	-563	20	563	intron_retention	FALSE	canonical	3	1445	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCATTCATTCATTCA	NA	False	NA	8	True	NA	NA	NA	79975564	79998205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_79975694_79994644
Isoform_55229_445	chr15	+	782	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	35	2	25	-2	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGCCTGTGTGGAT	NA	False	NA	16	True	NA	NA	NA	79975569	79997640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
Isoform_55230_31	chr15	+	931	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	-114	2	-114	-2	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGCCTGTGTGGAT	NA	False	NA	16	True	NA	NA	NA	79975420	79997640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
Isoform_55231_389	chr15	+	807	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	10	2	0	-2	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGCCTGTGTGGAT	NA	False	NA	16	True	NA	NA	NA	79975544	79997640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
Isoform_55232_72	chr15	+	1348	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	34	-563	24	563	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCATTCATTCATTCA	NA	False	NA	8	True	NA	NA	NA	79975568	79998205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
Isoform_55236_150	chr15	+	4178	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	1	1	1	-1	multi-exon	FALSE	canonical	3	37	junction_3	626.014554321401	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTGTGTCACTGTGT	NA	False	NA	19	True	AATAAA	-19	NA	79975545	80003701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055
Isoform_55240_19	chr15	+	1711	3	NIC	ENSMUSG00000022415.13	novel	819	4	NA	NA	13	-2	intron_retention	FALSE	canonical	3	1362	junction_2	41.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGCCTGTGTGGAT	NA	False	NA	16	True	NA	NA	NA	79975557	79997640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_79975694_79994644_79995946_79997366
Isoform_55243_288	chr15	+	2957	11	FSM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	3	4	3	-4	multi-exon	FALSE	canonical	3	51	junction_3	7.29109045342327	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATGTCATCTTGTCTA	4996	False	NA	11	True	AATAGA	-19	NA	80017330	80045904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
Isoform_55244_5	chr15	+	3022	11	NNC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	19.0496719131853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGATGTCATCTTGTCT	4996	False	NA	10	True	AATAGA	-18	NA	80017330	80045903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_80017390_80032427_80032565_80032887_80033042_80033916_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
Isoform_55245_4	chr15	+	3894	10	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	8	-3	intron_retention	FALSE	canonical	3	54	junction_1	6.47120879047157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCATCTTGTCTAT	5001	False	NA	12	True	AATAGA	-20	NA	80017335	80045905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_80017390_80032427_80032565_80032887_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
Isoform_55247_4	chr15	+	4222	9	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	0	-6	intron_retention	FALSE	canonical	3	54	junction_1	6.76387462923434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGATGTCATCTTGTC	4993	False	NA	9	True	AATAGA	-17	NA	80017327	80045902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_80017390_80032427_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
Isoform_55250_26	chr15	+	4719	2	FSM	ENSMUSG00000042428.7	ENSMUST00000044970.7	4665	2	-56	2	-56	-2	multi-exon	FALSE	canonical	3	32	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGCGTGTGTGCTGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	80057865	80099718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80058040_80095173
Isoform_55251_13	chr15	+	4860	2	FSM	ENSMUSG00000042428.7	ENSMUST00000044970.7	4665	2	-196	1	-196	-1	multi-exon	FALSE	canonical	3	32	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCGTGTGTGCTGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	80057725	80099719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80058040_80095173
Isoform_55252_15	chr15	+	4782	2	FSM	ENSMUSG00000042428.7	ENSMUST00000044970.7	4665	2	-119	2	-119	-2	multi-exon	FALSE	canonical	3	32	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGCGTGTGTGCTGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	80057802	80099718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80058040_80095173
Isoform_55258_60	chr15	+	5170	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	14	-21	1	-1	intron_retention	FALSE	canonical	3	52	junction_1	78.4488509936393	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2829	False	NA	15	True	AATAAA	-17	NA	80118294	80137571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_55260_12	chr15	+	5193	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	-9	-21	-9	-1	intron_retention	FALSE	canonical	3	52	junction_1	78.4488509936393	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2806	False	NA	15	True	AATAAA	-17	NA	80118271	80137571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_55265_13	chr15	+	5085	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	52	junction_1	85.8344660119439	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2829	False	NA	16	True	AATAAA	-18	NA	80118294	80137572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
Isoform_55266_234	chr15	+	5025	8	NNC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	89.7750022022175	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2828	False	NA	16	True	AATAAA	-18	NA	80118293	80137572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529_80134550_80134570_80135053_80135079
Isoform_55267_42	chr15	+	4350	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	76	722	1	-137	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTCTTTGTTGCC	2829	False	NA	8	True	AGTAAA	-23	NA	80118294	80136850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_55268_10	chr15	+	3887	7	NNC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	1	-586	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_6	65.64149263656	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTTGACTTTGGACT	2816	False	NA	NA	False	AATGAA	-20	NA	80118281	80136401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529_80135053_80135079
Isoform_55273_14	chr15	+	2329	7	NNC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	12	19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	86.1677949635993	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTCACAGAAGAGTG	2765	False	NA	NA	False	AATGAA	-14	NA	80118230	80134785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529_80134550_80134569
Isoform_55276_16	chr15	+	5166	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	-19	1	-19	-1	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2734	False	NA	15	True	AATAAA	-17	NA	80118199	80137571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_55277_38	chr15	+	4946	8	NNC	ENSMUSG00000022412.15	novel	4394	6	NA	NA	4	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	92.1123980664439	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2819	False	NA	15	True	AATAAA	-17	NA	80118284	80137571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529_80134550_80134571_80135053_80135079
Isoform_5528_26	chr10	+	4004	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-20	1076	-20	-1076	multi-exon	FALSE	canonical	3	746	junction_2	70.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTCATTTAACTTACAAG	7572	False	NA	21	True	AGTAAA	-24	NA	11157053	11172720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_11157245_11165263_11167317_11170960
Isoform_55280_11	chr15	+	5048	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	-71	-583	12	-2	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACGTGTCTATGTG	2765	False	NA	14	True	AATAAA	-16	NA	80118230	80137570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
Isoform_55281_11	chr15	+	4260	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	-8	142	0	-142	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTTGGTTCTTTG	2828	False	NA	3	True	AGTAAA	-18	NA	80118293	80136845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
Isoform_55285_8	chr15	+	5588	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-25	1	intron_retention	FALSE	canonical	3	18	junction_1	87.9071479839192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACGTGTCTATGTGGTA	2790	False	NA	17	True	AATAAA	-19	NA	80118255	80137573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_5529_21	chr10	+	5082	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-28	6	-28	-6	multi-exon	FALSE	canonical	3	746	junction_2	70.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCTAATTTTTGTTT	7564	False	NA	NA	False	AATAAA	-19	NA	11157045	11173790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_11157245_11165263_11167317_11170960
Isoform_55291_14	chr15	+	5399	8	NNC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	102.660327571769	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2829	False	NA	15	True	AATAAA	-17	NA	80118294	80137571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529_80134550_80134571_80135053_80135079
Isoform_55297_24	chr15	+	1462	4	FSM	ENSMUSG00000042406.9	ENSMUST00000229828.2	659	4	-21	-782	-20	0	multi-exon	FALSE	canonical	3	33	junction_1	614.772044473939	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4125	False	NA	32	True	AATAAA	-20	NA	80139364	80141742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80139486_80139768_80139887_80140407_80140723_80140834
Isoform_55301_1766	chr15	+	1406	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	314	5	-25	-5	multi-exon	FALSE	canonical	3	1292	junction_2	43	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACCTATGTGGGTTTTC	4459	False	NA	27	True	AATAAA	-15	NA	80139698	80141737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80139887_80140407_80140723_80140834
Isoform_55315_4	chr15	+	2991	5	FSM	ENSMUSG00000022408.8	ENSMUST00000023044.7	2993	5	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGCAGTGTGGTGTGT	NA	False	NA	NA	False	ATTAAA	-28	NA	80556047	80584624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80556589_80574117_80574286_80574733_80574856_80576111_80576798_80583150
Isoform_55320_6	chr15	+	5864	22	NIC	ENSMUSG00000047888.11	novel	5215	18	NA	NA	-39	-190	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	5.61985466359312	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTCATGTTATATGGA	NA	False	NA	17	True	ATTAAA	-23	NA	80682803	80814019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
Isoform_55321_3	chr15	+	5707	21	NIC	ENSMUSG00000047888.11	novel	5215	18	NA	NA	-50	-199	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	5.88302643203309	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCACTTTTTTCATG	NA	False	NA	8	True	ATTAAA	-14	NA	80682792	80814010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
Isoform_55324_496	chr15	+	2036	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	33	1642	4	185	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTGTTTTATATTT	NA	False	NA	3	True	NA	NA	NA	80832723	80853505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
Isoform_55342_390	chr15	+	2742	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	36	219	-19	182	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCTCCCATCTTTTGT	NA	False	NA	13	True	AATAAA	-13	NA	80862001	80896272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_55343_38	chr15	+	2963	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	34	0	20	0	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTGTTTTATTTTAA	NA	False	NA	7	True	AATACA	-17	NA	80861999	80896491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_55346_23	chr15	+	2784	22	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	20	183	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	34.5722156541651	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTCCCATCTTTTGTT	NA	False	NA	14	True	AATAAA	-14	NA	80861999	80896273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895817
Isoform_55348_7	chr15	+	2869	21	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-19	181	intron_retention	FALSE	canonical	3	124	junction_4	14.7961988361876	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80862001	80896271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_55351_8	chr15	+	2826	22	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	11	182	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	35.2891522006204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCTCCCATCTTTTGT	NA	False	NA	13	True	AATAAA	-13	NA	80861990	80896272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_80862067_80886769_80886866_80887560_80887720_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_55355_33	chr15	+	3434	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	12	2612	0	-18	multi-exon	FALSE	canonical	3	30	junction_9	9.02397355744309	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCCTTT	NA	False	NA	NA	False	NA	NA	NA	81284350	81339071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
Isoform_55361_1384	chr15	+	516	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	49	1110	1	-127	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGTTGCTGTTTCATG	NA	False	NA	13	True	AATAAA	-13	NA	81350545	81359460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
Isoform_55362_37	chr15	+	545	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	22	1108	22	-125	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350518	81359462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
Isoform_55364_161	chr15	+	1623	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	52	0	4	0	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGTCATTTTCACC	NA	False	NA	17	True	NA	NA	NA	81350548	81360570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
Isoform_55370_72	chr15	+	477	5	FSM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	49	125	49	-125	multi-exon	FALSE	canonical	3	348	junction_1	1851.90407081468	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350890	81359462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358130_81359286
Isoform_55375_7	chr15	+	8753	31	FSM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	808	5	-15	-5	multi-exon	FALSE	canonical	3	47	junction_8	16.0257085126784	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCTTGGTGTCACTTC	3717	False	NA	17	True	AATAAA	-17	NA	81470405	81536273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
Isoform_55376_6	chr15	+	9603	31	FSM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	-46	9	0	-9	multi-exon	FALSE	canonical	3	47	junction_8	16.0257085126784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGAGCTTGGTGTCA	2863	False	NA	13	True	AATAAA	-13	NA	81469551	81536269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
Isoform_55387_8	chr15	+	3781	4	ISM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	57725	9	-1728	-9	3prime_fragment	FALSE	canonical	3	83	junction_2	10.7806410858642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGAGCTTGGTGTCA	3471	False	NA	13	True	AATAAA	-13	NA	81527322	81536269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_81527393_81529075_81529238_81532539_81532822_81533002
Isoform_55393_2427	chr15	+	3433	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	48	6	3	4	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	2427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGTGATGATATCAG	NA	False	NA	11	True	AATAAA	-18	NA	81548137	81572510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
Isoform_55394_91	chr15	+	3469	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	12	6	12	4	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGTGATGATATCAG	NA	False	NA	11	True	AATAAA	-18	NA	81548101	81572510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
Isoform_55420_6	chr15	+	2531	17	ISM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	18	10077	18	1727	5prime_fragment	TRUE	canonical	3	185	junction_12	29.7192593279173	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGTTTTGGGGGGGCGT	1966	False	NA	NA	False	TATAAA	-29	NA	81629275	81670384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082
Isoform_55422_161	chr15	+	5722	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	18	0	18	0	multi-exon	FALSE	canonical	3	112	junction_21	52.4698457282257	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTAGCCTTTGTTCT	1966	False	NA	4	True	AATAAA	-15	NA	81629275	81680461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
Isoform_55428_29	chr15	+	4239	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	2	-162	2	-3	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGCAGTGGTCTTTT	NA	False	NA	14	True	ATTAAA	-14	NA	81695616	81711061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
Isoform_55429_221	chr15	+	4183	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	58	-162	58	-3	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGCAGTGGTCTTTT	NA	False	NA	14	True	ATTAAA	-14	NA	81695672	81711061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
Isoform_55436_7602	chr15	+	2742	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	175	1	0	-1	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	7602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTGCCTGAGTGATTG	NA	False	NA	18	True	AAAAAG	-15	NA	81756684	81799333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
Isoform_55438_131	chr15	+	2779	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	138	1	-37	-1	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTGCCTGAGTGATTG	NA	False	NA	18	True	AAAAAG	-15	NA	81756647	81799333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
Isoform_5545_3	chr10	+	5247	7	NIC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	12	junction_1	52.1568148311736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3057	False	NA	18	True	AATAAA	-18	NA	12966578	13007438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_12966765_12967518_12967557_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885
Isoform_5546_3	chr10	+	5272	7	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	22	junction_4	46.4521856919086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTTCTGTCTTTTCAT	3054	False	NA	15	True	AATAAA	-15	NA	12966575	13007435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_12966765_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885
Isoform_55477_3	chr15	+	2445	4	FSM	ENSMUSG00000042109.9	ENSMUST00000038757.8	2490	4	37	8	4	-1	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGAGCTGCCTGTCTT	5879	False	NA	NA	False	AATAAA	-20	NA	81820996	81835134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81821189_81830831_81831134_81832774_81832898_81833306
Isoform_5548_3	chr10	+	5366	6	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	-27	0	intron_retention	FALSE	canonical	3	37	junction_1	40.8480109674878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2886	False	NA	18	True	AATAAA	-18	NA	12966407	13007438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_12966765_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
Isoform_55480_1468	chr15	+	2087	13	FSM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	27	0	27	0	multi-exon	TRUE	canonical	3	579	junction_9	64.3868516598433	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900596	81924286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
Isoform_55484_23	chr15	+	3493	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	27	-1	intron_retention	FALSE	canonical	3	583	junction_6	63.4240614455424	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81900596	81924284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81915464_81919877_81919979_81921657_81921772_81923922
Isoform_5549_5	chr10	+	5194	6	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	-4	intron_retention	FALSE	canonical	3	37	junction_1	40.8480109674878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATCTTTCTGTCTTTTCA	3054	False	NA	14	True	AATAAA	-14	NA	12966575	13007434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_12966765_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
Isoform_55490_29	chr15	+	1991	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	190.783291885872	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900603	81924286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
Isoform_5550_3	chr10	+	5122	4	NIC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	13	junction_1	54.485472069779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3057	False	NA	16	True	AATAAA	-16	NA	12966578	13007436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_12966765_12992453_12992526_13000599_13000913_13002885
Isoform_55501_3	chr15	+	3995	31	FSM	ENSMUSG00000068117.11	ENSMUST00000089178.11	3956	31	114	-153	114	1	multi-exon	TRUE	canonical	0	0	junction_18	1.51327459504216	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGTGTGCACTTTC	5094	False	NA	NA	False	AATAAA	-12	NA	81954311	82011013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81954506_81956082_81956207_81957039_81957091_81959318_81959393_81961800_81961907_81964125_81964330_81966097_81966229_81967274_81967390_81969014_81969132_81970331_81970432_81970536_81970672_81973708_81973824_81975509_81975602_81976819_81976962_81978097_81978210_81980070_81980132_81982201_81982300_81985148_81985318_81985628_81985777_81987340_81987617_81991230_81991397_81993739_81993839_81996644_81996756_81997048_81997213_81999639_81999722_81999883_82000060_82007622_82007705_82008098_82008206_82009050_82009183_82009353_82009467_82010814
Isoform_55502_94	chr15	+	2042	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	2	2	2	1	multi-exon	FALSE	canonical	3	36	junction_2	6.64371047599825	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATGTCTTTGGCTTCTT	NA	False	NA	23	True	AATAAA	-34	NA	82012124	82026402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
Isoform_55504_20	chr15	+	2281	2	ISM	ENSMUSG00000022463.9	ENSMUST00000231065.2	2664	3	20	1832	15	526	5prime_fragment	FALSE	canonical	3	751	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAAACAGCGTTTT	2258	False	NA	NA	False	NA	NA	NA	82031466	82055994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_82031692_82053938
Isoform_55507_220	chr15	+	1976	4	FSM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	4	1	4	-1	multi-exon	FALSE	canonical	3	662	junction_2	39.6176167324027	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTT	2247	False	NA	NA	False	NA	NA	NA	82031455	82058094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953
Isoform_5551_5	chr10	+	5278	7	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	22	junction_4	43.4335379887734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGTCTTTTCATTT	3054	False	NA	17	True	AATAAA	-17	NA	12966575	13007437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885
Isoform_55510_577	chr15	+	5002	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	74	1	4	-1	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGGCTGTGTGAGTCT	2247	False	NA	24	True	AATAAA	-20	NA	82031455	82089579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
Isoform_55520_36	chr15	+	4016	18	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	12	-2021	intron_retention	FALSE	canonical	3	12	junction_17	162.450737808521	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGACTTCCT	2255	False	NA	NA	False	NA	NA	NA	82031463	82085999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82085183
Isoform_5553_5	chr10	+	5335	6	FSM	ENSMUSG00000019817.19	ENSMUST00000121646.8	5260	6	-77	2	-1	-2	multi-exon	FALSE	canonical	3	25	junction_3	38.4416440855487	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	2933	False	NA	16	True	AATAAA	-16	NA	12966454	13007436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885
Isoform_5554_11	chr10	+	5236	6	FSM	ENSMUSG00000019817.19	ENSMUST00000121646.8	5260	6	24	0	-20	0	multi-exon	FALSE	canonical	3	25	junction_3	38.4416440855487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3034	False	NA	18	True	AATAAA	-18	NA	12966555	13007438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885
Isoform_5555_24	chr10	+	5201	6	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	44	junction_3	31.1704988731332	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGTCTTTTCATTT	3054	False	NA	17	True	AATAAA	-17	NA	12966575	13007437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
Isoform_5556_3	chr10	+	5327	6	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	44	junction_3	31.1704988731332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	2927	False	NA	16	True	AATAAA	-16	NA	12966448	13007436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
Isoform_55578_22	chr15	+	5002	10	FSM	ENSMUSG00000022456.19	ENSMUST00000023095.14	4992	10	-11	1	-11	-1	multi-exon	FALSE	canonical	3	32	junction_7	5.9087714668037	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTGGTCTTTGTCTTA	NA	False	NA	NA	False	ACTAAA	-20	NA	82159428	82178774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
Isoform_55580_16	chr15	+	3902	6	FSM	ENSMUSG00000022455.5	ENSMUST00000023089.5	1413	6	9	-2498	9	2498	multi-exon	FALSE	canonical	3	14	junction_3	3.32264954516723	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCATGGTCAGTAATTTC	2009	False	NA	3	True	AATAAA	-16	NA	82183163	82201322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82183270_82189871_82189981_82190244_82190387_82190546_82190640_82192723_82192829_82197975
Isoform_55581_3	chr15	+	2749	3	NNC	ENSMUSG00000049687.6	novel	2745	2	NA	NA	31	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCAAGTAGAGTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	82225410	82229968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_82225473_82227259_82229921_82229942
Isoform_55582_22	chr15	+	565	3	FSM	ENSMUSG00000022452.17	ENSMUST00000161892.2	597	3	6	26	6	6	multi-exon	FALSE	canonical	3	88	junction_1	632.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGTCCCCATTTCTCA	NA	False	NA	36	True	AATAAA	-18	NA	82230220	82233266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82230422_82232100_82232242_82233043
Isoform_55584_234	chr15	+	569	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	110	26	-13	5	multi-exon	FALSE	canonical	3	1353	junction_2	125	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCGTCCCCATTTCTC	NA	False	NA	35	True	AATAAA	-17	NA	82230264	82233265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82230471_82232100_82232242_82233043
Isoform_55587_5	chr15	+	692	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	-16	29	-16	2	multi-exon	FALSE	canonical	3	1353	junction_2	125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAGGTCGTCCCCATTT	NA	False	NA	32	True	AATAAA	-14	NA	82230138	82233262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82230471_82232100_82232242_82233043
Isoform_55588_86	chr15	+	1370	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	2	-1	2	1	multi-exon	FALSE	canonical	3	56	junction_2	9.92534113742268	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCAAGTGGCTGTTGTCA	NA	False	NA	18	True	AATAAA	-19	NA	82984406	83000876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
Isoform_55589_87	chr15	+	1288	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	85	-2	0	2	multi-exon	FALSE	canonical	3	56	junction_2	9.92534113742268	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTGGCTGTTGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	82984489	83000877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
Isoform_55590_10	chr15	+	943	5	FSM	ENSMUSG00000016758.5	ENSMUST00000016902.5	942	5	0	-1	0	1	multi-exon	FALSE	canonical	3	12	junction_1	7.58287544405155	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTAGGTCGTCCTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	83411062	83428836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_83411138_83425495_83425644_83427265_83427365_83427780_83427899_83428333
Isoform_55591_220	chr15	+	819	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	11	7	11	-7	multi-exon	FALSE	canonical	3	179	junction_1	54.5119762580257	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACAGACTCTGTACT	NA	False	NA	14	True	AATAAA	-14	NA	83447803	83458397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
Isoform_55592_3284	chr15	+	1672	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	-6	2963	-6	-2963	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	3284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076435	84098505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
Isoform_556_260	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	1	-1	1	1	multi-exon	FALSE	canonical	3	173	junction_6	1003.16519576788	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCTCTATAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	5910	1034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
Isoform_5561_44	chr10	+	2208	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	57	3476	-26	16	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTCTATTTGCTTCT	NA	False	NA	54	True	AATGAA	-40	NA	13376801	13391303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
Isoform_55613_3	chr15	+	2789	2	ISM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	19	41794	-4	-12	intron_retention	FALSE	canonical	3	78	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84116262	84158095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_84116388_84155431
Isoform_55614_25	chr15	+	3768	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	15	1	-8	-1	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGTGCTTTGATCAGAC	NA	False	NA	78	True	AATAAA	-15	NA	84116258	84199888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
Isoform_55616_44	chr15	+	1613	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	19	2152	-4	-2152	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGAGTCTCAGAAGATT	NA	False	NA	20	True	AGTAAA	-23	NA	84116262	84197737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
Isoform_55618_24	chr15	+	2891	13	FSM	ENSMUSG00000022439.10	ENSMUST00000023074.9	2619	13	-274	2	-274	-2	multi-exon	TRUE	canonical	2	3	junction_2	5.54464205837992	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCATGACTTAATGACAG	NA	False	NA	NA	False	AATAAA	-18	NA	84208646	84227141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84209033_84211188_84211285_84212495_84212561_84213064_84213168_84214223_84214365_84215179_84215296_84216491_84216548_84216891_84216915_84218542_84218602_84218786_84218856_84221985_84222088_84225054_84225128_84225539
Isoform_55620_166	chr15	+	1829	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	2	-1	2	0	multi-exon	FALSE	canonical	3	134	junction_7	10.3844467687921	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	NA	False	NA	5	True	AATAAA	-15	NA	84565204	84587874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
Isoform_55622_3	chr15	+	1392	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	-39	477	-39	-477	multi-exon	FALSE	canonical	3	134	junction_7	10.3844467687921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGTTCATGTTTTTACT	NA	False	NA	NA	False	NA	NA	NA	84565163	84587396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
Isoform_55625_3	chr15	+	3735	8	NIC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	-8	1367	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	88.0401114520523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATATGTAATTTGTTTG	NA	False	NA	NA	False	AATAAA	-28	NA	84604275	84644468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_84604309_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84641422
Isoform_55626_194	chr15	+	1494	12	NIC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	-4	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	58.989143138924	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	NA	False	NA	9	True	ATTAAA	-16	NA	84604279	84656405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_84604309_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
Isoform_55628_42	chr15	+	1493	12	FSM	ENSMUSG00000078954.10	ENSMUST00000172307.9	1544	12	49	2	18	1	multi-exon	FALSE	non_canonical	0	0	junction_1	58.989143138924	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGGGGTTTTGTGCTTC	NA	False	NA	10	True	ATTAAA	-17	NA	84604301	84656406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84604329_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
Isoform_5563_40	chr10	+	2276	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	57	3408	-26	84	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTATAATATTTTAG	NA	False	NA	13	True	AATACA	-23	NA	13376801	13391371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
Isoform_55630_9	chr15	+	942	3	ISM	ENSMUSG00000078954.10	ENSMUST00000168811.2	1464	11	33924	0	-3070	0	3prime_fragment	FALSE	canonical	3	209	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	NA	False	NA	9	True	ATTAAA	-16	NA	84651016	84656405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_84651431_84654197_84654302_84655981
Isoform_55633_152	chr15	+	2422	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-22	2366	-22	590	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCCTTTATTTTAAAA	NA	False	NA	40	True	ATTAAA	-43	NA	84807589	84824798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
Isoform_55635_341	chr15	+	1832	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-21	2955	-21	1	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTCTCCCTTCCTAAG	NA	False	NA	24	True	AATAAA	-18	NA	84807590	84824209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
Isoform_55638_514	chr15	+	4757	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	2	7	2	-7	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCGTTGGGTACTG	NA	False	NA	12	True	AATAAA	-12	NA	84807613	84827157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
Isoform_5564_5	chr10	+	2739	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	39	2963	39	529	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTACTGGTATGAATT	NA	False	NA	NA	False	NA	NA	NA	13376783	13391816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
Isoform_55657_47	chr15	+	2607	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	65.1689163199833	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921392	84947030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
Isoform_55658_12	chr15	+	2707	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	65.1689163199833	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921292	84947030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
Isoform_55660_14	chr15	+	2585	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	67.2724330384562	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921322	84947030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84944289_84944391_84945732
Isoform_55662_215	chr15	+	2466	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	51	1	15	-1	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921340	84947030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
Isoform_55664_116	chr15	+	2517	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	0	1	0	-1	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921289	84947030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
Isoform_55667_1035	chr15	+	2245	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	28	0	28	0	multi-exon	FALSE	canonical	3	356	junction_14	63.5701845785187	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTACCTTGGTTT	NA	False	NA	35	True	AATAAA	-25	NA	85090233	85136086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
Isoform_55668_76	chr15	+	2272	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	1	0	1	0	multi-exon	FALSE	canonical	3	356	junction_14	63.5701845785187	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTACCTTGGTTT	NA	False	NA	35	True	AATAAA	-25	NA	85090206	85136086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
Isoform_55669_19	chr15	+	2359	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	-92	6	-36	-6	multi-exon	TRUE	canonical	3	356	junction_14	63.5701845785187	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCATGCCTCTTGTACCT	NA	False	NA	29	True	AATAAA	-19	NA	85090113	85136080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
Isoform_55670_537	chr15	+	2727	17	FSM	ENSMUSG00000006369.15	ENSMUST00000057410.14	3659	17	84	848	28	-848	multi-exon	FALSE	canonical	3	136	junction_16	137.738202761616	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGGATTGCAATTTTG	NA	False	NA	54	True	AATAAA	-44	NA	85090233	85169888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
Isoform_5568_7	chr10	+	2479	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	55	-527	-28	527	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGGTATGAA	NA	False	NA	NA	False	NA	NA	NA	13376799	13391814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_55682_1905	chr15	+	1823	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	112	2	112	-2	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGACCCTTGATTG	NA	False	NA	23	True	AATAAA	-31	NA	85220557	85347411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
Isoform_55684_899	chr15	+	1907	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	28	2	28	-2	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGACCCTTGATTG	NA	False	NA	23	True	AATAAA	-31	NA	85220473	85347411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
Isoform_55685_114	chr15	+	2454	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	112	-629	112	629	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGTAGAGGGCTTAC	NA	False	NA	19	True	AATAAA	-20	NA	85220557	85348042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
Isoform_55686_41	chr15	+	2539	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	28	-630	28	630	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTAGAGGGCTTACC	NA	False	NA	20	True	AATAAA	-21	NA	85220473	85348043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
Isoform_5570_27	chr10	+	1921	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	87	-1	4	1	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTCCCTCATATTCAT	NA	False	NA	39	True	AATGAA	-25	NA	13376831	13391288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_55707_6	chr15	+	3759	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	-12	2	-12	-2	multi-exon	FALSE	canonical	2	10	junction_3	3.06729262113491	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAATGTAAATAGCA	NA	False	NA	NA	False	TTTAAA	-4	NA	85716494	85743021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
Isoform_55709_1516	chr15	+	2659	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	25	-43	25	0	multi-exon	FALSE	canonical	3	528	junction_1	58.9672832668062	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7162	False	NA	30	True	ATTAAA	-41	NA	85743970	85760774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
Isoform_5571_27	chr10	+	1852	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	176	-21	93	21	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTTGCTTCTATTTG	NA	False	NA	-50	True	AATGAA	-45	NA	13376920	13391308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_55710_221	chr15	+	2727	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	-43	-43	-43	0	multi-exon	FALSE	canonical	3	528	junction_1	58.9672832668062	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7094	False	NA	30	True	ATTAAA	-41	NA	85743902	85760774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
Isoform_5572_14	chr10	+	2385	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	150	-528	67	528	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCTACTGGTATGAAT	NA	False	NA	NA	False	NA	NA	NA	13376894	13391815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_55720_68	chr15	+	2716	11	FSM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	-24	0	-24	0	multi-exon	FALSE	canonical	3	556	junction_6	54.9377829913076	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7314	False	NA	30	True	ATTAAA	-41	NA	85744122	85760774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
Isoform_5573_23	chr10	+	1924	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	167	-84	84	84	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTATAATATTTTAG	NA	False	NA	13	True	AATACA	-23	NA	13376911	13391371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_55731_45	chr15	+	1528	11	FSM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	0	-2	0	0	multi-exon	FALSE	canonical	3	28	junction_4	10.36532681588	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGTCTGGGGCTTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	85763520	85781595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
Isoform_55732_3	chr15	+	1699	11	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	6	-1	intron_retention	FALSE	canonical	3	7	junction_6	17.8504901893477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCATGTGTCTGGGGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	85763526	85781592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778222_85778378_85778485_85779126_85779228_85780560_85780706_85781035_85781119_85781225
Isoform_55733_4	chr15	+	3803	8	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	-24	0	intron_retention	FALSE	canonical	3	28	junction_4	9.55969429961235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGTCTGGGGCTTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	85763557	85781595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85780706_85781035_85781119_85781225
Isoform_55735_133	chr15	+	4170	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	35	-5	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGAATCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-21	NA	85942962	86021827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
Isoform_55736_5	chr15	+	3207	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	9	-981	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTGTCTTTCTTATTT	NA	False	NA	NA	False	AAGAAA	-26	NA	85942936	86020838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
Isoform_5574_3	chr10	+	5420	9	NNC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	-41	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	58.6893303761425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGCACTAGCCCTTGACC	NA	False	NA	NA	False	AATAAA	-17	NA	13376786	13394776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860_13393768_13393801
Isoform_55740_7	chr15	+	4117	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-64	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.3302130480553	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTGAGGAATCCTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	85943008	86021824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_85943163_85975517_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
Isoform_55741_4	chr15	+	3885	18	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-39	5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	15.2696637080777	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTGAGGAATCCTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	85943033	86021824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_85943163_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
Isoform_55744_234	chr15	+	3242	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	-13	0	-13	0	multi-exon	FALSE	canonical	3	67	junction_12	8.71779788708135	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTTTTATTGCATT	NA	False	NA	8	True	AATAAA	-17	NA	86098646	86382704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
Isoform_55746_5	chr15	+	3143	12	NIC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-13	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	25.1159295538782	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCTTTTTATTGC	NA	False	NA	5	True	AATAAA	-14	NA	86098646	86382701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86381013
Isoform_55748_4	chr15	+	2573	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	27	3	27	-1	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCATGGCTTTTGTTCCC	NA	False	NA	NA	False	AATAAA	-18	NA	87509457	87643562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
Isoform_55749_7	chr15	+	1496	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	18	1089	18	-1087	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATATATTTAACAGTTT	NA	False	NA	11	True	ATTAAA	-21	NA	87509448	87642476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
Isoform_55750_4	chr15	+	2417	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	-950	1136	-950	-1134	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCTGTTTGAAAGAGAT	NA	False	NA	-36	True	ATTAAA	-12	NA	87508480	87642429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
Isoform_55751_11	chr15	+	5473	4	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	71.0414589439778	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGACTGATGATGGC	NA	False	NA	33	True	ATTAAA	-20	NA	88635859	88668717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_88636006_88638962_88639137_88654740_88654788_88663611
Isoform_55753_328	chr15	+	5427	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	-4	2	-4	-2	multi-exon	FALSE	canonical	3	163	junction_1	12	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGACTGATGATGGC	NA	False	NA	33	True	ATTAAA	-20	NA	88635858	88668717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88636006_88638962_88639137_88663611
Isoform_5576_232	chr10	+	806	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	340	320	340	-320	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAAGACTATTTCCAG	NA	False	NA	54	True	TTTAAA	-40	NA	13428977	13438800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
Isoform_55761_299	chr15	+	1409	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	-46	3	-46	-3	multi-exon	FALSE	canonical	3	902	junction_1	99.7619388566824	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGACGTGTTGGTTTG	NA	False	NA	14	True	AATAAA	-23	NA	88703802	88710883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
Isoform_55762_632	chr15	+	1364	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	1	1	1	-1	multi-exon	FALSE	canonical	3	902	junction_1	99.7619388566824	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACGTGTTGGTTTGTT	NA	False	NA	16	True	AATAAA	-25	NA	88703849	88710885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
Isoform_55771_576	chr15	+	2425	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	0	2	0	-2	multi-exon	TRUE	canonical	3	800	junction_3	47.4021096576935	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTGTTTATTGGA	NA	False	NA	28	True	ATTAAA	-18	NA	88746388	88749927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
Isoform_55772_2685	chr15	+	2138	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	289	0	289	0	multi-exon	FALSE	canonical	3	800	junction_3	47.4021096576935	2685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88746677	88749929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
Isoform_5579_30	chr10	+	1800	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	307	-641	307	641	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAGTGTTTGAGTCGTT	NA	False	NA	4	True	GATAAA	-14	NA	13428944	13439761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
Isoform_55797_9	chr15	+	2018	11	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-3	49483	-3	10594	5prime_fragment	FALSE	canonical	3	47	junction_4	7.62954782408499	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGACACATGGTAATTT	2904	False	NA	NA	False	AATAAA	-17	NA	88867108	88889868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454
Isoform_55798_19	chr15	+	2031	12	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	1	49199	1	10878	5prime_fragment	FALSE	canonical	3	47	junction_4	7.60382678775509	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCGTGTTTGTATTTAA	2908	False	NA	NA	False	AAAAAG	-32	NA	88867112	88890152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
Isoform_55799_5	chr15	+	7988	12	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-19	43262	-19	-11735	intron_retention	TRUE	canonical	3	47	junction_4	7.60382678775509	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTCAAAGTATTATT	2888	False	NA	NA	False	AATAAA	-18	NA	88867092	88896089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
Isoform_55800_14	chr15	+	2469	14	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-3	43262	-3	-11735	5prime_fragment	FALSE	canonical	3	36	junction_13	10.1817797586303	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTCAAAGTATTATT	2904	False	NA	NA	False	AATAAA	-18	NA	88867108	88896089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565
Isoform_55801_280	chr15	+	2375	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	59	5	0	1	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCGCTTTGTGAAGTG	NA	False	NA	4	True	AATAAA	-14	NA	88960274	88971275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
Isoform_55802_37	chr15	+	1480	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	12	947	12	0	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGGCTTCCCAGCA	NA	False	NA	NA	False	AATAAA	-16	NA	88960227	88970333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
Isoform_55804_15	chr15	+	2397	10	FSM	ENSMUSG00000015363.14	ENSMUST00000169870.8	2396	10	0	-1	0	1	multi-exon	FALSE	canonical	3	5	junction_3	29.0546526309673	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCGCTTTGTGAAGTG	NA	False	NA	4	True	AATAAA	-14	NA	88960274	88971275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88960345_88965182_88965248_88965555_88965657_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
Isoform_55805_12	chr15	+	2438	10	FSM	ENSMUSG00000015363.14	ENSMUST00000169870.8	2396	10	-43	1	16	-1	multi-exon	FALSE	canonical	3	5	junction_3	29.0546526309673	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCCCGCTTTGTGAAG	NA	False	NA	2	True	AATAAA	-12	NA	88960231	88971273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88960345_88965182_88965248_88965555_88965657_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
Isoform_55806_8	chr15	+	2930	10	FSM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	-53	-936	-1	-2	multi-exon	FALSE	canonical	2	4	junction_1	29.3749704491577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTCCCGCTTTGTGAA	NA	False	NA	1	True	AATAAA	-11	NA	88960273	88971272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88960902_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
Isoform_55808_85	chr15	+	2372	9	FSM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	12	-1	12	1	multi-exon	TRUE	canonical	3	22	junction_2	3.38193731461717	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTCACTGCCTTGGC	NA	False	NA	NA	False	AATAAA	-19	NA	88973298	88984544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
Isoform_55809_7	chr15	+	3601	8	NIC	ENSMUSG00000035757.18	novel	2383	9	NA	NA	12	1	intron_retention	FALSE	canonical	3	28	junction_7	2.1189138534559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTCACTGCCTTGGC	NA	False	NA	NA	False	AATAAA	-19	NA	88973298	88984544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_88973869_88976906_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
Isoform_5581_32	chr10	+	1747	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	360	-641	360	641	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAGTGTTTGAGTCGTT	NA	False	NA	4	True	GATAAA	-14	NA	13428997	13439761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
Isoform_55810_6	chr15	+	1357	8	FSM	ENSMUSG00000036561.10	ENSMUST00000226779.2	2072	8	0	715	0	-715	multi-exon	FALSE	canonical	2	19	junction_2	4.65109159888563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTAATGTCTGGGTAAT	6669	False	NA	NA	False	NA	NA	NA	89095761	89146756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555
Isoform_55811_6	chr15	+	4330	26	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	6.88697321034429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTGTCTTATTGTTA	6661	False	NA	80	True	AATAAA	-16	NA	89095753	89171214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
Isoform_55815_98	chr15	+	1035	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	261	2	261	-2	multi-exon	FALSE	canonical	3	63	junction_1	15	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGGCCACTCTCTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	89207183	89208932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89207337_89207479_89207604_89208174
Isoform_55817_11	chr15	+	1895	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	213	-810	213	810	multi-exon	FALSE	canonical	3	63	junction_1	15	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGGAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	89207135	89209744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89207337_89207479_89207604_89208174
Isoform_55821_52	chr15	+	1955	20	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	-11	25	combination_of_known_junctions	FALSE	canonical	1	145	junction_1	299.76465376263	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGACAGACTATTTAAATG	NA	False	NA	23	True	AATAAA	-23	NA	89239954	89255791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_55822_216	chr15	+	1928	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	49	1246	5	17	multi-exon	FALSE	canonical	1	145	junction_1	244.22211859964	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239970	89255783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_55824_71	chr15	+	2009	20	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	3	17	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	320.159906376438	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239968	89255783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_55826_405	chr15	+	2020	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	-11	1246	-11	17	multi-exon	TRUE	canonical	0	0	junction_1	269.960005245468	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239954	89255783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_55827_32	chr15	+	3247	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	6	2	6	-2	multi-exon	FALSE	canonical	0	0	junction_1	269.960005245468	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGTTGATCCTCTGG	NA	False	NA	4	True	AATAAA	-14	NA	89239971	89257027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_55831_324	chr15	+	2040	20	FSM	ENSMUSG00000008690.16	ENSMUST00000088717.7	3302	20	16	1246	-11	17	multi-exon	FALSE	canonical	1	166	junction_15	242.636453884124	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239954	89255783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_55833_920	chr15	+	2037	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	16	1246	-11	17	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239954	89255783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_55835_67	chr15	+	3282	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	16	1	-11	-1	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGTTGATCCTCTGGC	NA	False	NA	5	True	AATAAA	-15	NA	89239954	89257028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_5586_19	chr10	+	701	2	FSM	ENSMUSG00000111888.2	ENSMUST00000220256.2	1003	2	634	-332	634	332	multi-exon	FALSE	canonical	3	15	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTACGCCTATTTCTGT	NA	False	NA	NA	False	AATAAA	-25	NA	14420867	14427107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_14421099_14426637
Isoform_55860_235	chr15	+	3244	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	293	2021	293	-2021	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	1551	False	NA	16	True	AATAAA	-16	NA	89338408	89346650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_55861_26	chr15	+	3400	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	137	2021	137	-2021	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	1395	False	NA	16	True	AATAAA	-16	NA	89338252	89346650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_55863_25	chr15	+	5264	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	293	1	293	-1	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGCTTATCTCAG	1551	False	NA	10	True	AATAAA	-17	NA	89338408	89348670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_55864_5	chr15	+	5420	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	136	2	136	-2	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGTTGCTTATCTCA	1394	False	NA	9	True	AATAAA	-16	NA	89338251	89348669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_55866_24	chr15	+	3341	11	ISM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	1094	2021	-35	-2021	3prime_fragment	FALSE	canonical	3	72	junction_10	9.60416576283438	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	2352	False	NA	16	True	AATAAA	-16	NA	89339209	89346650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_55871_72	chr15	+	6645	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	-8	7	-8	-7	multi-exon	FALSE	canonical	3	65	junction_2	7.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTGTTGAATATAT	NA	False	NA	NA	False	AATAAA	-8	NA	90108505	90117667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_90108812_90109859_90110058_90111526
Isoform_55872_6	chr15	+	5261	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	-40	1423	-40	-1423	multi-exon	FALSE	canonical	3	65	junction_2	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGTTTTTGAAATTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	90108473	90116251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_90108812_90109859_90110058_90111526
Isoform_55875_6	chr15	+	3564	3	FSM	ENSMUSG00000075470.3	ENSMUST00000231200.2	6457	3	-55	2948	-17	-2948	multi-exon	FALSE	canonical	2	7	junction_2	36.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACGGTTGTTTGTTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	90108496	90114726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_90108812_90109859_90110058_90111675
Isoform_55876_4	chr15	+	6476	3	FSM	ENSMUSG00000075470.3	ENSMUST00000231200.2	6457	3	-19	0	19	0	multi-exon	FALSE	canonical	2	7	junction_2	36.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAATATATTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	90108532	90117674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_90108812_90109859_90110058_90111675
Isoform_55877_30	chr15	+	2769	13	FSM	ENSMUSG00000078932.9	ENSMUST00000190436.7	2041	13	-10	-718	-10	718	multi-exon	FALSE	canonical	2	14	junction_9	6.39172642301489	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTCTTGATAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	91083686	91145815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91124845_91125023_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
Isoform_55878_7	chr15	+	2588	13	NNC	ENSMUSG00000078932.9	novel	2041	13	NA	NA	-30	716	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	10.1608589969331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATTTCTCTTGATAA	NA	False	NA	NA	False	ATTAAA	-12	NA	91083666	91145813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611_91145660_91145681
Isoform_55879_3	chr15	+	4092	10	FSM	ENSMUSG00000036218.17	ENSMUST00000169942.10	3102	10	-207	-783	-207	0	multi-exon	FALSE	canonical	0	0	junction_5	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGCTTCTAGGTCAT	NA	False	NA	NA	False	AATAAA	-10	NA	92294554	92669700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_92295387_92297627_92297715_92299809_92299918_92575381_92575639_92578321_92578425_92641451_92641551_92644122_92644186_92650578_92650681_92655518_92655636_92667376
Isoform_5588_3	chr10	+	375	2	NIC	ENSMUSG00000112227.2	novel	628	3	NA	NA	20	-56	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGCTGACTTTTAATAAA	NA	False	NA	NA	False	AATAAA	-22	NA	15667544	15682757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_15667781_15682618
Isoform_55881_6	chr15	+	3540	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	46.1078897803836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGTTCACTT	NA	False	NA	NA	False	TATAAA	-22	NA	93296242	93389380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_55884_28	chr15	+	3922	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	-9	397	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	46.1078897803836	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296268	93389788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_55886_4	chr15	+	3431	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	53.2326430464831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGTTCACTT	NA	False	NA	NA	False	TATAAA	-22	NA	93296231	93389380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
Isoform_55887_7	chr15	+	1242	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	12	13	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	53.2326430464831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTAGAATGTTTCCCCT	NA	False	NA	NA	False	AATAAA	-24	NA	93296242	93387202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
Isoform_55890_9	chr15	+	3795	9	FSM	ENSMUSG00000036167.17	ENSMUST00000068457.15	3351	9	-36	-408	14	396	multi-exon	FALSE	canonical	3	14	junction_4	61.4527257328754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAATTCGTCTCCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	93296244	93389787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_55891_107	chr15	+	3739	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	14	-2599	14	397	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296244	93389788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_55896_52	chr15	+	3603	7	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	-17	397	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296260	93389788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
Isoform_5590_458	chr10	+	1947	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	8	24	-7	7	multi-exon	FALSE	canonical	3	306	junction_1	0	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACTTGTTTTCTAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	17598973	17601398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_17599208_17599685
Isoform_55900_12	chr15	+	3489	6	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	15	398	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	63.5282614274938	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTCGTCTCCTCTCGT	NA	False	NA	NA	False	AATAAA	-18	NA	93296295	93389789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93362985_93363127_93386854
Isoform_55903_10	chr15	+	4219	10	NNC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	14	403	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	65.021553881277	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296244	93389794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_93296343_93297107_93297375_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_55904_5	chr15	+	3991	9	NNC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	-18	397	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	66.2400935989677	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296259	93389788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_93296343_93297107_93297375_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_55909_4	chr15	+	1506	10	NNC	ENSMUSG00000059883.17	novel	3437	12	NA	NA	0	5182	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	9.63788819653397	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTCTTGGTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	94441552	94460016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459797
Isoform_55910_5	chr15	+	1127	7	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	10071	5180	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	8.1325819325039	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	94451623	94460014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459797
Isoform_55913_192	chr15	+	2812	8	FSM	ENSMUSG00000063296.6	ENSMUST00000080141.6	2717	8	-95	0	-77	0	multi-exon	FALSE	canonical	3	72	junction_7	14.5195153683108	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGTGTGATGTAGGTT	NA	False	NA	4	True	AATAAA	-17	NA	94527035	94993979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_94527184_94535941_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94972284_94972415_94992239
Isoform_55915_10	chr15	+	2876	8	FSM	ENSMUSG00000063296.6	ENSMUST00000080141.6	2717	8	-158	-1	-140	1	multi-exon	FALSE	canonical	3	72	junction_7	14.5195153683108	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTGTGATGTAGGTTT	NA	False	NA	5	True	AATAAA	-18	NA	94526972	94993980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_94527184_94535941_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94972284_94972415_94992239
Isoform_55916_4	chr15	+	756	4	NNC	ENSMUSG00000063296.6	novel	2717	8	NA	NA	-137	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	46.5044800709208	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	TTTAAA	-14	NA	94526975	94615031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_94527184_94535941_94536245_94612742_94612876_94614919
Isoform_55919_32	chr15	+	5708	21	FSM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	-51	-2508	-2	716	multi-exon	FALSE	canonical	3	29	junction_1	22.898635330517	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGCTGTGGCCTAACG	NA	False	NA	4	True	AATAAA	-13	NA	95688721	95873348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_95688938_95728524_95728588_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
Isoform_55920_3	chr15	+	2064	3	ISM	ENSMUSG00000064210.8	ENSMUST00000227151.2	4134	21	-94	77651	-4	1309	5prime_fragment	FALSE	canonical	3	75	junction_1	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	95688719	95794056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_95688938_95762105_95762189_95792293
Isoform_55922_95	chr15	+	5645	20	FSM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	-2	-716	-2	716	multi-exon	FALSE	canonical	3	69	junction_10	12.2043995518441	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGCTGTGGCCTAACG	NA	False	NA	4	True	AATAAA	-13	NA	95688721	95873348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
Isoform_55929_30	chr15	+	7146	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-27	1388	-27	3	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCCTTTATTTCTGAGT	NA	False	NA	16	True	AATAAA	-17	NA	96185426	96301485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
Isoform_55931_23	chr15	+	7782	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-666	1391	-611	0	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTTATTTCTG	NA	False	NA	13	True	AATAAA	-14	NA	96184787	96301482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
Isoform_55932_10	chr15	+	8376	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-41	172	14	-172	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCATATAGTGAAGGCAT	NA	False	NA	NA	False	AATAAA	-20	NA	96185412	96302701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
Isoform_55933_5	chr15	+	8538	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-33	2	22	-2	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTTGGATAAGTGACT	NA	False	NA	16	True	AATAAA	-17	NA	96185420	96302871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
Isoform_55934_7	chr15	+	6559	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-722	2670	-667	-1279	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGATTGTCAACC	NA	False	NA	NA	False	NA	NA	NA	96184731	96300203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
Isoform_55940_3	chr15	+	1954	2	FSM	ENSMUSG00000116160.2	ENSMUST00000229356.2	632	2	0	-1322	0	1322	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATATACACTCCTTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	96395782	96398091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_96395869_96396223
Isoform_55941_3	chr15	+	2530	2	FSM	ENSMUSG00000116160.2	ENSMUST00000229356.2	632	2	-9	-1889	-9	1889	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTTTGTGTGATGCT	NA	False	NA	NA	False	AATAAA	-17	NA	96395773	96398658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_96395869_96396223
Isoform_55942_3	chr15	+	1795	2	FSM	ENSMUSG00000044250.9	ENSMUST00000226495.2	441	2	-9	-1345	6	14	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCTGCCTGTTGTGTGT	NA	False	NA	28	True	AATAAA	-29	NA	97259088	97283575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_97259217_97281908
Isoform_55943_244	chr15	+	2501	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	34	1	34	-1	multi-exon	TRUE	canonical	3	145	junction_2	1	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTTTTTTTTTCAC	NA	False	NA	16	True	AATAAA	-17	NA	97682269	97690572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_97682498_97687783_97687952_97688467
Isoform_55945_3	chr15	+	1377	8	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.5683069266455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7703	False	NA	11	True	AATAAA	-17	NA	97862132	97868156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_97862161_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
Isoform_55946_6	chr15	+	1436	8	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	50.2548606644985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7689	False	NA	11	True	AATAAA	-17	NA	97862118	97868156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_97862206_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
Isoform_55947_117	chr15	+	1433	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	23	-1	-4	0	multi-exon	FALSE	canonical	3	86	junction_1	28.3318527024094	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7703	False	NA	11	True	AATAAA	-17	NA	97862132	97868156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
Isoform_55948_3	chr15	+	1649	8	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.5683069266455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCACTGTCTCTGACTG	7706	False	NA	10	True	AATAAA	-16	NA	97862135	97868155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_97862385_97862668_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
Isoform_55949_49	chr15	+	1603	8	FSM	ENSMUSG00000052369.9	ENSMUST00000064200.9	1623	8	26	-6	0	6	multi-exon	FALSE	canonical	3	51	junction_1	38.9117263685331	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTGACTGCCTGTAT	7707	False	NA	17	True	AATAAA	-23	NA	97862136	97868162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_97862385_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
Isoform_5595_3	chr10	+	2420	10	FSM	ENSMUSG00000039891.7	ENSMUST00000037964.7	4422	10	41	1961	41	-1961	multi-exon	FALSE	canonical	1	5	junction_4	2.43938871112224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGTGCCTTAATCCAG	NA	False	NA	NA	False	AATATA	-16	NA	17672044	17719452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_17672170_17674835_17675282_17682512_17682605_17690976_17691148_17703539_17703735_17705983_17706104_17709025_17709101_17714655_17714749_17717173_17717270_17718445
Isoform_55950_11	chr15	+	1917	7	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	125	junction_4	17.9884222024427	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCACTGTCTCTGACT	7721	False	NA	9	True	AATAAA	-15	NA	97862150	97868154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
Isoform_55951_6	chr15	+	1300	12	ISM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	79	7253	79	3983	5prime_fragment	FALSE	canonical	0	0	junction_1	25.7415636505158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCCTGCAGCGATTT	1675	False	NA	NA	False	NA	NA	NA	98006425	98023069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906
Isoform_55952_17	chr15	+	2895	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	-10	-6	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1586	False	NA	7	True	AATAAA	-19	NA	98006336	98030328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
Isoform_55953_132	chr15	+	2799	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	86	-6	86	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1682	False	NA	7	True	AATAAA	-19	NA	98006432	98030328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
Isoform_55957_41	chr15	+	2440	18	ISM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	12595	-6	12595	0	3prime_fragment	FALSE	canonical	3	75	junction_7	12.0037479729426	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98018941	98030328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
Isoform_5596_3	chr10	+	4376	10	FSM	ENSMUSG00000039891.7	ENSMUST00000037964.7	4422	10	44	2	44	-2	multi-exon	FALSE	canonical	1	5	junction_4	2.43938871112224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCTAGTAGGTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	17672047	17721411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_17672170_17674835_17675282_17682512_17682605_17690976_17691148_17703539_17703735_17705983_17706104_17709025_17709101_17714655_17714749_17717173_17717270_17718445
Isoform_55962_31	chr15	+	2557	13	FSM	ENSMUSG00000003352.15	ENSMUST00000109150.9	2513	13	-44	0	-44	0	multi-exon	FALSE	canonical	3	18	junction_1	9.06879570591132	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	5	True	AATAAA	-16	NA	98530212	98542410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
Isoform_55963_5	chr15	+	2508	12	NIC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	13.5109383295704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	5	True	AATAAA	-16	NA	98530241	98542410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
Isoform_55964_4	chr15	+	2502	13	NIC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	13.644290625264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGGTGTCTCTGGTCTGT	NA	False	NA	6	True	AATAAA	-17	NA	98530265	98542411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98538336_98538569_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
Isoform_55965_49	chr15	+	2819	13	FSM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	-342	0	-4	0	multi-exon	FALSE	canonical	3	16	junction_1	9.50548087508816	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	40	False	NA	5	True	AATAAA	-16	NA	98532643	98542410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
Isoform_55968_7	chr15	+	2891	14	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	30	-2	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	15.6371579917571	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCGGTGTCTCTGGTC	74	False	NA	3	True	AATAAA	-14	NA	98532677	98542408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_98533095_98533174_98533283_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
Isoform_55971_1848	chr15	+	1553	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	430	-1	0	1	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATCTGGTTCATAG	NA	False	NA	16	True	AATAAA	-23	NA	98928201	98935992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
Isoform_55972_25	chr15	+	1910	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	73	-1	73	1	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATCTGGTTCATAG	NA	False	NA	16	True	AATAAA	-23	NA	98927844	98935992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
Isoform_55974_77	chr15	+	1582	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	401	-1	-29	1	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATCTGGTTCATAG	NA	False	NA	16	True	AATAAA	-23	NA	98928172	98935992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
Isoform_55975_23	chr15	+	1972	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	11	-1	11	1	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATCTGGTTCATAG	NA	False	NA	16	True	AATAAA	-23	NA	98927782	98935992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
Isoform_55983_51	chr15	+	1768	9	FSM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	-7	-4	0	0	multi-exon	FALSE	canonical	3	16	junction_2	6.35290287978653	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTTGGTCTGAGGT	-8	True	NA	10	True	AATAAA	-22	NA	98953054	98956858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
Isoform_55984_8	chr15	+	1865	8	FSM	ENSMUSG00000023484.15	ENSMUST00000047104.15	1863	8	-1	-1	0	0	multi-exon	FALSE	canonical	3	16	junction_2	6.60859057498307	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTTGGTCTGAGGTA	-8	True	NA	11	True	AATAAA	-23	NA	98953054	98956859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
Isoform_55985_12	chr15	+	1340	8	ISM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	753	4	-36	-4	3prime_fragment	FALSE	canonical	3	16	junction_1	6.19743198956682	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTCCTTACTGTGTTGG	58	False	NA	2	True	AATAAA	-14	NA	98953814	98956850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
Isoform_55986_4	chr15	+	2549	12	ISM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	417	1	5	1	intron_retention	FALSE	canonical	3	25	junction_1	18.9173932822427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCAGCCAGTGCTGTT	NA	False	NA	13	True	AATAAA	-22	NA	98972872	98981289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006
Isoform_55987_93	chr15	+	2228	14	FSM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	410	1	-2	1	multi-exon	FALSE	canonical	3	25	junction_1	17.6655315775427	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCAGCCAGTGCTGTT	NA	False	NA	13	True	AATAAA	-22	NA	98972865	98981289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
Isoform_55988_6	chr15	+	2603	12	ISM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	-18	-2	-18	2	intron_retention	FALSE	canonical	3	68	junction_1	8.70071717382211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGGGCAGCCAGTGCT	NA	False	NA	10	True	AATAAA	-19	NA	98972840	98981286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006
Isoform_55989_3	chr15	+	2385	13	ISM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	-2	-3	-2	-1	intron_retention	FALSE	canonical	3	68	junction_1	9.24962461700774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGGGCAGCCAGTGCTG	NA	False	NA	11	True	AATAAA	-20	NA	98972856	98981287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789
Isoform_5599_199	chr10	+	2996	20	FSM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	-387	-14	-308	2	multi-exon	FALSE	canonical	3	129	junction_9	41.6677266716506	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTATTTGTTGGCG	NA	False	NA	16	True	AATAAA	-27	NA	17931300	18000894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
Isoform_55990_136	chr15	+	2244	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	16	-5	7	1	multi-exon	FALSE	canonical	3	68	junction_1	8.88852727732572	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCAGCCAGTGCTGTT	NA	False	NA	13	True	AATAAA	-22	NA	98972874	98981289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
Isoform_55991_3	chr15	+	2051	13	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	24.8075929236729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCAGCCAGTGCTGTT	NA	False	NA	13	True	AATAAA	-22	NA	98972873	98981289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98981108
Isoform_55992_12	chr15	+	2462	13	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_1	8.33166649996666	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972858	98981288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980984_98981108
Isoform_55993_6	chr15	+	974	2	ISM	ENSMUSG00000032783.10	ENSMUST00000230311.2	819	3	-52	1387	0	-6	5prime_fragment	FALSE	canonical	3	90	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTATCTAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	98972858	98973941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_98973380_98973488
Isoform_55994_4	chr15	+	2516	13	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_9	8.01387685344754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972858	98981288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
Isoform_55997_29	chr15	+	1549	3	FSM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	21	-6	21	6	multi-exon	FALSE	canonical	3	51	junction_1	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCCTAGCCCAGGATAT	4044	False	NA	9	True	AATAAA	-27	NA	98997313	99002624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_98997482_98998703_98999657_99002196
Isoform_5600_13	chr10	+	3050	20	FSM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	-438	-17	-359	5	multi-exon	FALSE	canonical	3	129	junction_9	41.6677266716506	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTATTTGTTGGCGAGC	NA	False	NA	19	True	AATAAA	-30	NA	17931249	18000897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
Isoform_56000_714	chr15	+	3089	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	6	1	6	-1	multi-exon	FALSE	canonical	3	296	junction_2	25.9147909289056	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTAGCGCCGTCTCTC	NA	False	NA	17	True	AATAAA	-22	NA	99024442	99111095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
Isoform_56007_27	chr15	+	3123	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	-27	0	-27	0	multi-exon	FALSE	canonical	3	296	junction_2	25.9147909289056	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	False	NA	18	True	AATAAA	-23	NA	99024409	99111096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
Isoform_56013_40	chr15	+	2795	12	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	-4	-8	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	100.076582246046	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGACTCCTTAGCGCC	NA	False	NA	10	True	AATAAA	-15	NA	99024432	99111088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99024769_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
Isoform_56018_13	chr15	+	3993	15	FSM	ENSMUSG00000037579.8	ENSMUST00000041415.5	3698	15	-289	-6	-289	6	multi-exon	FALSE	canonical	3	10	junction_1	5.04520382468866	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCAGTACTTTTTATTT	NA	False	NA	13	True	AATAAA	-14	NA	99122452	99140704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99122933_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
Isoform_56024_50	chr15	+	3172	26	NIC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	106	junction_21	27.793351723029	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99193122	99214898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_56025_41	chr15	+	3333	26	NIC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	106	junction_21	27.793351723029	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99192961	99214898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_56026_11	chr15	+	3168	26	NNC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_25	36.3090291800814	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99193122	99214898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214345
Isoform_56028_7	chr15	+	3205	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_22	41.8124192076947	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99193101	99214898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_56034_71	chr15	+	3333	26	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	102	junction_21	28.1893596947501	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192957	99214897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_56035_91	chr15	+	3170	26	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	102	junction_21	28.1893596947501	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99193121	99214898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_56038_13	chr15	+	3340	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_22	42.0526527106198	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99192963	99214898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_56042_9	chr15	+	2385	19	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-26	3989	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_18	45.4269526238703	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGAACTCTAATATCCTG	NA	False	NA	NA	False	NA	NA	NA	99192941	99208947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99208539
Isoform_56052_9	chr15	+	3256	25	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	39.0095919472236	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99192957	99214898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_56054_16	chr15	+	3254	25	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-11	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	39.2925061769629	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99192956	99214898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_56059_6	chr15	+	3309	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	39.9788744213741	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99193140	99214898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_56061_8	chr15	+	3302	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-10	4	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	40.2403976123497	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTCCTTTGTCCTCTTC	NA	False	NA	40	True	TTTAAA	-21	NA	99193141	99214895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_5607_83	chr10	+	2902	19	FSM	ENSMUSG00000019854.18	ENSMUST00000164556.8	2537	19	-387	22	-308	1	multi-exon	FALSE	canonical	3	82	junction_9	47.5026964796685	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTCTGGAGAATACATT	NA	False	NA	3	True	AATAAA	-14	NA	17931300	18000881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
Isoform_56070_127	chr15	+	2559	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	2	-1413	2	-2	multi-exon	FALSE	canonical	3	52	junction_1	709.276455269735	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGTCTCAGTGTTAA	NA	False	NA	13	True	AATAAA	-18	NA	99290868	99307928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99290922_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
Isoform_56076_3460	chr15	+	2345	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	106	1	2	-1	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	3460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290868	99307929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
Isoform_56077_47	chr15	+	2368	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	83	1	-21	-1	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290845	99307929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
Isoform_56086_131	chr15	+	2438	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	19	-1513	19	-1	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99291118	99307929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
Isoform_56105_5	chr15	+	1573	4	FSM	ENSMUSG00000044217.18	ENSMUST00000169082.3	1797	4	216	8	149	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTGCCTTCATCTCCC	NA	False	NA	NA	False	AATAAA	-13	NA	99488878	99492702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99489516_99490542_99490708_99491126_99491211_99492015
Isoform_56108_12	chr15	+	3879	12	FSM	ENSMUSG00000023017.11	ENSMUST00000023758.9	4114	12	237	-2	237	0	multi-exon	FALSE	canonical	2	3	junction_5	2.84299923111125	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCAGTGTTGGTTTTCTG	NA	False	NA	4	True	AATAAA	-17	NA	99568485	99599011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99568776_99569664_99570043_99570748_99570945_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
Isoform_56110_3	chr15	+	3356	12	FSM	ENSMUSG00000023017.11	ENSMUST00000023758.9	4114	12	-29	787	-29	-787	multi-exon	FALSE	canonical	2	3	junction_5	2.84299923111125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTGCCTCTTTCTGGC	NA	False	NA	NA	False	CATAAA	-17	NA	99568219	99598222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99568776_99569664_99570043_99570748_99570945_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
Isoform_56114_530	chr15	+	3139	13	FSM	ENSMUSG00000023018.6	ENSMUST00000023759.6	3307	13	168	0	6	0	multi-exon	FALSE	canonical	3	247	junction_12	25.0281785638153	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTGCTGTCTGGAGGG	7709	False	NA	26	True	AATAAA	-17	NA	99600177	99611872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
Isoform_56115_404	chr15	+	3324	13	FSM	ENSMUSG00000023018.6	ENSMUST00000023759.6	3307	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	247	junction_12	25.0281785638153	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTGCTGTCTGGAGGG	7524	False	NA	26	True	AATAAA	-17	NA	99599992	99611872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
Isoform_5612_4	chr10	+	7187	9	NNC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	-314	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	10.9251716233659	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAAACTTCTTTGT	NA	False	NA	11	True	AATAAA	-15	NA	18194418	18409629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_18195025_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18399758_18399778_18402791_18403283_18403417_18407015
Isoform_56128_4	chr15	+	2767	9	NNC	ENSMUSG00000023019.13	novel	2861	8	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.11102430216445	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGAAGAGTTGGGGG	NA	False	NA	NA	False	AATAAA	-15	NA	99615453	99622885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_99615530_99616032_99616211_99617014_99617156_99617976_99618116_99618446_99618560_99619815_99620050_99620336_99620444_99621071_99621274_99621308
Isoform_56129_4	chr15	+	2299	4	NNC	ENSMUSG00000023019.13	novel	2861	8	NA	NA	1764	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGAGTTGGGGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	99619640	99622889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_99620050_99620336_99620444_99621071_99621274_99621308
Isoform_5613_3	chr10	+	7344	9	NNC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	-471	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	10.9251716233659	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAAACTTCTTTGT	NA	False	NA	11	True	AATAAA	-15	NA	18194261	18409629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_18195025_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18399758_18399778_18402791_18403283_18403417_18407015
Isoform_56130_12	chr15	+	2080	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	2	8	2	-8	multi-exon	FALSE	canonical	3	1440	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTCTTTGATGT	NA	False	NA	NA	False	AATAAA	-16	NA	99623529	99627405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99623730_99625525
Isoform_56131_625	chr15	+	606	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	0	1484	0	478	multi-exon	FALSE	canonical	3	1440	junction_1	0	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTAGTGGTTCTGTG	NA	False	NA	20	True	ATTAAA	-15	NA	99623527	99625929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99623730_99625525
Isoform_56133_53	chr15	+	645	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	28	1417	-2	545	multi-exon	FALSE	canonical	3	1440	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTGGTCTCTCTCTTT	NA	False	NA	26	True	AGTAAA	-33	NA	99623555	99625996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99623730_99625525
Isoform_5614_3	chr10	+	7214	8	NNC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	-471	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	11.8562822407122	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAACTTCTTTGTAT	NA	False	NA	13	True	AATAAA	-17	NA	18194261	18409631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_18195025_18348666_18348820_18373780_18373906_18387297_18387491_18399538_18399758_18399778_18402791_18403283_18403417_18407015
Isoform_56140_48	chr15	+	6495	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99870698	99914239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
Isoform_56148_324	chr15	+	6467	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	57	6	0	-6	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGGTCTGGTTTCTTT	NA	False	NA	NA	False	AATAAA	-9	NA	99870717	99914233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
Isoform_5616_23	chr10	+	1862	3	FSM	ENSMUSG00000019851.9	ENSMUST00000019998.9	1952	3	88	2	88	-2	multi-exon	FALSE	canonical	3	42	junction_2	1	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTGTCTGCTTTGTA	NA	False	NA	10	True	AATAAA	-12	NA	18720855	18732819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_18721155_18729284_18729426_18731397
Isoform_5617_11	chr10	+	1997	3	FSM	ENSMUSG00000019851.9	ENSMUST00000019998.9	1952	3	-47	2	-47	-2	multi-exon	FALSE	canonical	3	42	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTGTCTGCTTTGTA	NA	False	NA	10	True	AATAAA	-12	NA	18720720	18732819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_18721155_18729284_18729426_18731397
Isoform_56175_12	chr15	+	8894	39	NNC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	11.0457685459221	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTTTAATTCTTAAAC	4854	False	NA	9	True	AATAAA	-13	NA	99936541	100117354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058_100116411_100116430
Isoform_56176_18	chr15	+	8843	38	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	69	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	7.50183809957063	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTAATTCTTAAACC	4926	False	NA	10	True	AATAAA	-14	NA	99936613	100117355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
Isoform_56180_343	chr15	+	2322	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	45	-2	-7	2	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125744	100159127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
Isoform_56181_67	chr15	+	2327	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.684143362257	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTCGGAATGCAAAACA	NA	False	NA	16	True	ATTAAA	-19	NA	100125698	100159128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158220
Isoform_56185_9	chr15	+	2222	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-27	-128	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	110.684143362257	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGTCAGTACACCAGC	NA	False	NA	NA	False	TATAAA	-19	NA	100125672	100158997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158220
Isoform_5619_3	chr10	+	2007	7	FSM	ENSMUSG00000020009.14	ENSMUST00000164591.3	1974	7	-33	0	-13	0	multi-exon	FALSE	canonical	2	3	junction_2	10.3279555898864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	False	NA	17	True	AGTAAA	-18	NA	19467787	19485977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_19467946_19473163_19473265_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
Isoform_56190_13	chr15	+	2192	7	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	132.764202002397	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125731	100159127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_100125964_100130613_100130713_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158220
Isoform_56191_9	chr15	+	2195	7	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-20	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	141.705876926666	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTCGGAATGCAAAACA	NA	False	NA	16	True	ATTAAA	-19	NA	100125731	100159128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_100125964_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158220
Isoform_56196_97	chr15	+	1900	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	42	4	14	-4	multi-exon	FALSE	canonical	3	19	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTGGCTGCATTTG	580	False	NA	8	True	AATAAA	-43	NA	100202683	100212232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100203226_100210874
Isoform_56199_86	chr15	+	2420	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	-109	-1089	-25	0	multi-exon	FALSE	canonical	3	74	junction_1	16.3587705833904	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2310	False	NA	27	True	AGTAAA	-16	NA	100366878	100377045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_5620_3	chr10	+	2069	7	FSM	ENSMUSG00000020009.14	ENSMUST00000164591.3	1974	7	-103	8	12	-8	multi-exon	FALSE	canonical	2	3	junction_2	10.3279555898864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAACTCACTTGGATA	NA	False	NA	9	True	AGTAAA	-10	NA	19467717	19485969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_19467946_19473163_19473265_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
Isoform_56201_25	chr15	+	2637	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	-331	-1084	-247	-4	multi-exon	FALSE	canonical	3	74	junction_1	16.3587705833904	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2088	False	NA	22	True	AGTAAA	-11	NA	100366656	100377040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_56203_14	chr15	+	2274	8	FSM	ENSMUSG00000037353.10	ENSMUST00000230294.2	2266	8	-12	4	0	-4	multi-exon	FALSE	canonical	3	29	junction_2	31.1808418417333	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2335	False	NA	22	True	AGTAAA	-11	NA	100366903	100377040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100367020_100367565_100367718_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_56207_70	chr15	+	2411	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	92	-1	0	1	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGAATTACTTATGC	2427	False	NA	28	True	AGTAAA	-17	NA	100366995	100377046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_56208_6	chr15	+	2563	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	-61	0	-61	0	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2274	False	NA	27	True	AGTAAA	-16	NA	100366842	100377045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_56209_4	chr15	+	2754	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	-253	1	-253	0	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2082	False	NA	26	True	AGTAAA	-15	NA	100366650	100377044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_5621_66	chr10	+	2063	7	FSM	ENSMUSG00000020009.14	ENSMUST00000020188.13	2112	7	41	8	32	-8	multi-exon	FALSE	canonical	3	26	junction_4	3.14907393794853	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAACTCACTTGGATA	NA	False	NA	9	True	AGTAAA	-10	NA	19467737	19485969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_19467946_19473163_19473279_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
Isoform_56211_11	chr15	+	2485	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	12	5	0	-4	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2347	False	NA	22	True	AGTAAA	-11	NA	100366915	100377040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_56213_33	chr15	+	2844	8	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	0	-4	intron_retention	FALSE	canonical	3	81	junction_1	12.9362644830535	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2427	False	NA	22	True	AGTAAA	-11	NA	100366995	100377040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_56214_10	chr15	+	3171	8	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-231	0	intron_retention	FALSE	canonical	3	81	junction_1	12.9362644830535	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2104	False	NA	26	True	AGTAAA	-15	NA	100366672	100377044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_56217_8	chr15	+	2219	7	ISM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	2540	5	-844	-4	3prime_fragment	FALSE	canonical	3	98	junction_1	7.80313327381308	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	4875	False	NA	22	True	AGTAAA	-11	NA	100369443	100377040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_5622_12	chr10	+	5215	30	FSM	ENSMUSG00000071369.12	ENSMUST00000095806.10	5450	30	-211	446	-211	-446	multi-exon	FALSE	canonical	3	18	junction_4	5.46244338667921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTCCCGAGAATTCTT	NA	False	NA	11	True	AGTAAA	-24	NA	19810006	20018053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19987523_19987545_19993890_19994069_19994160_19994330_20000697_20000884_20003397_20003504_20007710_20007955_20012639_20012753_20014008_20014122_20016394_20016472_20017268
Isoform_56223_1460	chr15	+	1853	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	282	0	282	0	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	False	NA	18	True	AATAAA	-25	NA	100513511	100518642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
Isoform_56227_20	chr15	+	1979	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	151	5	151	-5	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGCCAGCATTCTTTA	NA	False	NA	13	True	AATAAA	-44	NA	100513380	100518637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
Isoform_56229_24	chr15	+	1986	4	NIC	ENSMUSG00000000346.10	novel	542	4	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	516	junction_1	340.746565972751	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCCAGCATTCTTTACTT	NA	False	NA	16	True	AATAAA	-23	NA	100513974	100518640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_100514204_100514793_100514913_100515805_100516052_100517248
Isoform_5623_3	chr10	+	5578	30	FSM	ENSMUSG00000071369.12	ENSMUST00000095806.10	5450	30	-573	445	-573	-445	multi-exon	FALSE	canonical	3	18	junction_4	5.46244338667921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCCCGAGAATTCTTA	NA	False	NA	12	True	AGTAAA	-25	NA	19809644	20018054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19987523_19987545_19993890_19994069_19994160_19994330_20000697_20000884_20003397_20003504_20007710_20007955_20012639_20012753_20014008_20014122_20016394_20016472_20017268
Isoform_56235_31	chr15	+	3744	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	14	8032	14	1	multi-exon	FALSE	canonical	3	11	junction_2	8.52355804031783	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTCTCTGATACTCT	NA	False	NA	12	True	ATTAAA	-20	NA	100659641	100713817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
Isoform_56236_7	chr15	+	4615	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	12	7163	12	775	multi-exon	FALSE	canonical	3	11	junction_2	8.52355804031783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCAAGTGTAGACCTCCC	NA	False	NA	NA	False	NA	NA	NA	100659639	100714686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
Isoform_56237_3	chr15	+	4618	24	FSM	ENSMUSG00000023032.13	ENSMUST00000162049.2	3532	24	-239	-847	-239	752	multi-exon	FALSE	canonical	3	7	junction_1	9.00556433744809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATCATGAGTTTTTTG	4276	False	NA	NA	False	TTTAAA	-28	NA	100678895	100714663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100679220_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
Isoform_56238_9	chr15	+	3772	24	FSM	ENSMUSG00000023032.13	ENSMUST00000162049.2	3532	24	-239	-1	-239	1	multi-exon	FALSE	canonical	3	7	junction_1	9.00556433744809	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTCTCTGATACTCT	4276	False	NA	12	True	ATTAAA	-20	NA	100678895	100713817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_100679220_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
Isoform_56239_3	chr15	+	1425	2	ISM	ENSMUSG00000023033.15	ENSMUST00000108908.6	7030	27	-23	104055	-16	1228	5prime_fragment	FALSE	canonical	3	63	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGTTAACACGCCTG	6953	False	NA	NA	False	AATAGA	-15	NA	100768809	100835436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_100768950_100834151
Isoform_56240_3	chr15	+	1747	9	ISM	ENSMUSG00000000530.17	ENSMUST00000120754.2	3506	10	469	1699	469	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATCTGCCTCCGTCTGGGC	NA	False	NA	NA	False	AATACA	-15	NA	101032482	101041518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_101032625_101033178_101033425_101033629_101033842_101034008_101034109_101034864_101035012_101035244_101035521_101036088_101036287_101038947_101039079_101041223
Isoform_56241_56	chr15	+	4376	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	39	3	39	-3	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTCTGATCCCGTCTGC	NA	False	NA	18	True	ATTAAA	-15	NA	101071986	101111562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
Isoform_56242_100	chr15	+	4352	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	63	3	63	-3	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTCTGATCCCGTCTGC	NA	False	NA	18	True	ATTAAA	-15	NA	101072010	101111562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
Isoform_56243_9	chr15	+	3098	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	-1	1321	-1	-1321	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTCTTAGTCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	101071946	101110244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
Isoform_56244_3	chr15	+	3152	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	12	1254	12	-1254	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGCACATAGTTCAGT	NA	False	NA	NA	False	AAGAAA	-37	NA	101071959	101110311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
Isoform_56248_10	chr15	+	2461	7	ISM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	37	0	37	0	intron_retention	FALSE	canonical	3	148	junction_1	34.0069437353935	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6278	False	NA	12	True	TATAAA	-21	NA	101122105	101130637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865
Isoform_56250_268	chr15	+	1996	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	37	0	37	0	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6278	False	NA	12	True	TATAAA	-21	NA	101122105	101130637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_56251_226	chr15	+	2035	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	-5	3	-5	-3	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTGTCAGTGTGGTA	6236	False	NA	9	True	TATAAA	-18	NA	101122063	101130634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_56255_7	chr15	+	4329	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	38	-2334	38	2334	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGGACTCTGTCTTTT	6279	False	NA	9	True	NA	NA	NA	101122106	101132971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_56259_10	chr15	+	2091	7	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	37	-2	intron_retention	FALSE	canonical	3	148	junction_1	34.2782730020052	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTCAGTGTGGTAA	6278	False	NA	10	True	TATAAA	-19	NA	101122105	101130635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128673_101128865_101128933_101129397
Isoform_56261_93	chr15	+	2601	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	-52	4	-52	-4	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGAGTCTTTTTTTCT	465	False	NA	15	True	AATAAA	-17	NA	101152097	101172672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_56262_204	chr15	+	2573	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	-22	2	-22	-2	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGAGTCTTTTTTTCTGT	495	False	NA	17	True	AATAAA	-19	NA	101152127	101172674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_56264_8	chr15	+	2730	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	-179	2	-179	-2	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGAGTCTTTTTTTCTGT	338	False	NA	17	True	AATAAA	-19	NA	101151970	101172674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_56266_192	chr15	+	2472	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	3	2	3	-2	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGAGTCTTTTTTTCTGT	NA	False	NA	17	True	AATAAA	-19	NA	101164729	101172674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_56267_48	chr15	+	2516	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	-43	4	-43	-4	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGAGTCTTTTTTTCT	NA	False	NA	15	True	AATAAA	-17	NA	101164683	101172672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_56268_9	chr15	+	2645	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	-171	3	-171	-3	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGTCTTTTTTTCTG	NA	False	NA	16	True	AATAAA	-18	NA	101164555	101172673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_56271_611	chr15	+	1240	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	29	1	29	-1	multi-exon	FALSE	canonical	3	465	junction_2	16.5	611	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTTGGCCTGTGTCC	8059	False	NA	30	True	AATAAA	-22	NA	101182181	101188825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101182427_101184813_101185132_101188148
Isoform_56273_26	chr15	+	1560	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	25	2509	-22	15	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTAGGAGTGGTACTCAC	NA	False	NA	21	True	AATAAA	-28	NA	101310307	101325685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
Isoform_56274_5	chr15	+	1622	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	-35	2507	-35	17	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGAGTGGTACTCACAG	NA	False	NA	23	True	AATAAA	-30	NA	101310247	101325687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
Isoform_56275_5	chr15	+	1695	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	-110	2509	-110	15	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTAGGAGTGGTACTCAC	NA	False	NA	21	True	AATAAA	-28	NA	101310172	101325685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
Isoform_56276_34	chr15	+	1384	7	FSM	ENSMUSG00000023043.8	ENSMUST00000023803.8	1437	7	48	5	48	-5	multi-exon	FALSE	canonical	3	28	junction_3	6.13731754650732	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCACTTTGTGTCTTCCTT	NA	False	NA	7	True	AATAAA	-19	NA	101936662	101940457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101937110_101937900_101937984_101938257_101938415_101939053_101939219_101939329_101939456_101939730_101939955_101940275
Isoform_56281_850	chr15	+	3704	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	150	0	59	0	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101982357	102005608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
Isoform_56282_196	chr15	+	3878	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	-25	1	-25	-1	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	48	True	AATAAA	-18	NA	101982182	102005607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
Isoform_5632_469	chr10	+	3732	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	518	2	5	-2	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTCTATTTATTTAA	NA	False	NA	12	True	ATTAAA	-17	NA	20024734	20157266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
Isoform_5633_221	chr10	+	3797	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	518	-63	5	-5	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTAGGGTTCCTGTGGTTT	NA	False	NA	10	True	AATAAA	-19	NA	20024734	20157331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
Isoform_56331_7	chr15	+	4708	29	FSM	ENSMUSG00000037003.17	ENSMUST00000228958.2	4268	29	-36	-404	-36	0	multi-exon	FALSE	canonical	1	1	junction_1	4.23180378388532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTTGATACCTTCTT	9322	False	NA	NA	False	AATAAA	-18	NA	102008811	102024835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102008988_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
Isoform_56332_6	chr15	+	4741	29	FSM	ENSMUSG00000037003.17	ENSMUST00000169627.9	4761	29	19	1	19	0	multi-exon	TRUE	canonical	1	1	junction_1	4.23180378388532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTTGATACCTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	102011387	102024835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102011597_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
Isoform_56333_3	chr15	+	4648	28	FSM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	-14	3	-14	-3	multi-exon	FALSE	canonical	2	5	junction_10	3.82361444641615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGAGTTGATACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	102012845	102024832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
Isoform_56335_18	chr15	+	2212	15	FSM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	-12	8	-12	-8	multi-exon	FALSE	canonical	3	11	junction_10	3.76408917893011	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATAAAATCTTGTC	NA	False	NA	NA	False	NA	NA	NA	102058948	102071896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102059148_102059540_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
Isoform_56336_5	chr15	+	2263	15	FSM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	-65	10	-65	-10	multi-exon	FALSE	canonical	3	11	junction_10	3.76408917893011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAATAAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	102058895	102071894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102059148_102059540_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
Isoform_56338_6	chr15	+	2160	14	ISM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	432	9	-158	-9	3prime_fragment	FALSE	canonical	3	11	junction_9	3.75113395084203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATAAAATCTTGT	NA	False	NA	NA	False	NA	NA	NA	102059392	102071895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
Isoform_56339_3	chr15	+	1812	11	NIC	ENSMUSG00000023045.14	novel	2208	15	NA	NA	-114	-8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	6.07371385562409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATAAAATCTTGTC	NA	False	NA	NA	False	NA	NA	NA	102059436	102071896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102059597_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
Isoform_5634_54	chr10	+	3831	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	419	2	-94	-2	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTCTATTTATTTAA	NA	False	NA	12	True	ATTAAA	-17	NA	20024635	20157266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
Isoform_56344_8	chr15	+	4038	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.2157658862373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	907	False	NA	25	True	AATAAA	-26	NA	102112083	102124041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102112238_102113005_102113319_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56345_28	chr15	+	3998	7	FSM	ENSMUSG00000046897.18	ENSMUST00000141465.9	989	7	-43	-2966	0	0	multi-exon	FALSE	canonical	0	0	junction_4	67.1203314122397	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	906	False	NA	25	True	AATAAA	-26	NA	102112082	102124041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102112238_102113005_102113319_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56347_12	chr15	+	4132	7	FSM	ENSMUSG00000046897.18	ENSMUST00000141465.9	989	7	-182	-2961	-139	0	multi-exon	FALSE	canonical	0	0	junction_4	67.1203314122397	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	767	False	NA	20	True	AATAAA	-21	NA	102111943	102124036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102112238_102113005_102113319_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56350_8	chr15	+	3995	7	NNC	ENSMUSG00000046897.18	novel	989	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_4	61.4945797069411	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCATGTCCTCTTTGAG	906	False	NA	18	True	AATAAA	-19	NA	102112082	102124034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_102112238_102113005_102113319_102116205_102116356_102116670_102116801_102117187_102117312_102117589_102117709_102121030
Isoform_56351_19	chr15	+	3954	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.6824694190945	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCATGTCCTCTTTGAG	907	False	NA	18	True	AATAAA	-19	NA	102112083	102124034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102112238_102113005_102113319_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56357_49	chr15	+	4409	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-136	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.5683069266455	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	770	False	NA	20	True	AATAAA	-21	NA	102111946	102124036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56358_67	chr15	+	4267	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.5683069266455	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	912	False	NA	20	True	AATAAA	-21	NA	102112088	102124036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56362_25	chr15	+	4276	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_5	49.2457394821406	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	907	False	NA	20	True	AATAAA	-21	NA	102112083	102124036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116801_102117187_102117312_102117589_102117709_102121030
Isoform_56365_16	chr15	+	4435	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-160	1	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_5	49.2457394821406	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCATGTCCTCTTTGAG	746	False	NA	18	True	AATAAA	-19	NA	102111922	102124034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116801_102117187_102117312_102117589_102117709_102121030
Isoform_56366_25	chr15	+	4366	8	FSM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	-125	0	-125	0	multi-exon	FALSE	canonical	0	0	junction_5	56.9883625785805	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTCTTTGAGAAGACT	781	False	NA	24	True	AATAAA	-25	NA	102111957	102124040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56368_51	chr15	+	4216	8	FSM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	21	4	10	0	multi-exon	FALSE	canonical	0	0	junction_5	56.9883625785805	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	927	False	NA	20	True	AATAAA	-21	NA	102112103	102124036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56371_10	chr15	+	4240	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_5	51.2297745058317	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATGTCCTCTTTGAGA	906	False	NA	19	True	AATAAA	-20	NA	102112082	102124035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116801_102117187_102117312_102117589_102117709_102121030
Isoform_56374_34	chr15	+	4189	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.5699298148613	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	918	False	NA	25	True	AATAAA	-26	NA	102112094	102124041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56376_20	chr15	+	4321	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-125	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.5699298148613	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	781	False	NA	20	True	AATAAA	-21	NA	102111957	102124036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56379_8	chr15	+	4202	7	NNC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_4	60.8632346604527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	904	False	NA	20	True	AATAAA	-21	NA	102112080	102124036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116801_102117187_102117312_102117589_102117709_102121030
Isoform_56380_11	chr15	+	4299	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.1912692741153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	772	False	NA	25	True	AATAAA	-26	NA	102111948	102124041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56381_22	chr15	+	4138	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.1912692741153	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	928	False	NA	20	True	AATAAA	-21	NA	102112104	102124036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_56394_3	chr15	+	2137	2	NNC	ENSMUSG00000097050.2	novel	2192	2	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCTCTGGTAAGGTT	1690	False	NA	NA	False	AATAAA	-10	NA	102179009	102182559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_102179766_102181178
Isoform_56395_623	chr15	+	1749	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	1	4	1	-4	multi-exon	FALSE	canonical	3	355	junction_1	0	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGTCCTCTCCTGTA	NA	False	NA	23	True	AATAAA	-19	NA	102187889	102190185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102188065_102188611
Isoform_56396_121	chr15	+	6677	31	FSM	ENSMUSG00000058290.5	ENSMUST00000229050.2	6635	31	2	-44	2	-1	multi-exon	FALSE	canonical	3	92	junction_1	63.2712063703195	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	393	False	NA	16	True	AATAAA	-16	NA	102204734	102232791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102204851_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
Isoform_56397_60	chr15	+	6653	31	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	69.6461213724226	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	393	False	NA	17	True	AATAAA	-17	NA	102204734	102232792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102204851_102205165_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
Isoform_56398_182	chr15	+	6623	31	FSM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	34	1	2	-1	multi-exon	FALSE	canonical	3	138	junction_1	58.1614706370692	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	393	False	NA	16	True	AATAAA	-16	NA	102204734	102232791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
Isoform_56399_7	chr15	+	6534	30	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	75.1147833503137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	393	False	NA	17	True	AATAAA	-17	NA	102204734	102232792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102204851_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
Isoform_5640_23	chr10	+	3895	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	419	-62	-94	-6	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTAGGGTTCCTGTGGTT	NA	False	NA	9	True	AATAAA	-18	NA	20024635	20157330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
Isoform_56400_13	chr15	+	6991	30	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	11	0	intron_retention	TRUE	canonical	3	251	junction_5	48.3978507988739	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	370	False	NA	17	True	AATAAA	-17	NA	102204711	102232792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
Isoform_5643_16	chr10	+	1960	7	NNC	ENSMUSG00000019996.18	novel	1008	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	110.886453435736	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGATGTATCTGATTGG	NA	False	NA	NA	False	AATAAA	-18	NA	20024734	20127638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20126340
Isoform_56431_470	chr15	+	629	6	FSM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	48	385	-4	2	multi-exon	FALSE	canonical	3	835	junction_1	29.5932424718887	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGTGGTCTATTCTTG	382	False	NA	28	True	AATAAA	-16	NA	102234598	102239923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
Isoform_56435_8	chr15	+	597	5	FSM	ENSMUSG00000001289.13	ENSMUST00000001335.7	570	5	-25	-2	-4	2	multi-exon	FALSE	canonical	3	11	junction_2	370.883741892254	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGTGGTCTATTCTTG	382	False	NA	28	True	AATAAA	-16	NA	102234598	102239923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102234696_102234867_102234971_102236956_102237032_102237146_102237253_102239707
Isoform_56436_8	chr15	+	929	5	FSM	ENSMUSG00000001289.13	ENSMUST00000168805.8	827	5	-22	-80	-2	2	multi-exon	FALSE	canonical	3	835	junction_1	33.0709464636257	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGTGGTCTATTCTTG	364	False	NA	28	True	AATAAA	-16	NA	102234580	102239923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102234696_102234867_102235285_102236956_102237032_102237146_102237253_102239707
Isoform_56437_624	chr15	+	1167	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	24	289	-5	-1	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACCCAGTCCCTGATCC	5951	False	NA	15	True	AATAAA	-16	NA	102240167	102246285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
Isoform_56438_19	chr15	+	1448	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	24	8	-5	-8	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAACCACCCTAGGAG	5951	False	NA	NA	False	NA	NA	NA	102240167	102246566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
Isoform_56440_7	chr15	+	3173	6	NIC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	4	-3	intron_retention	FALSE	canonical	3	490	junction_1	9.76524449258696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGACCCAGTCCCTGAT	5942	False	NA	13	True	AATAAA	-14	NA	102240158	102246283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102240389_102240524_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
Isoform_56446_62	chr15	+	7867	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-131	18	-84	-18	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTCTCTGGTGTATT	NA	False	NA	12	True	ATTAAA	-13	NA	102314683	102344821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
Isoform_56459_11	chr15	+	1968	11	FSM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	-23	-7	-23	4	multi-exon	FALSE	canonical	1	3	junction_1	59.5990771740637	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAATGTGTTTTTACTT	NA	False	NA	20	True	AATAAA	-20	NA	102353778	102363072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102353958_102354239_102354423_102354698_102354891_102355142_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_56460_5	chr15	+	1439	8	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	1315	-6	1234	3	3prime_fragment	FALSE	canonical	2	5	junction_1	62.2893183754122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAATGTGTTTTTACT	NA	False	NA	19	True	AATAAA	-19	NA	102355116	102363071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_56461_7	chr15	+	1164	5	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6616	-7	-176	4	3prime_fragment	FALSE	canonical	3	32	junction_1	46.916814683011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAATGTGTTTTTACTT	NA	False	NA	20	True	AATAAA	-20	NA	102360417	102363072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_56462_15	chr15	+	1053	5	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6723	-3	-69	0	3prime_fragment	FALSE	canonical	3	32	junction_1	46.916814683011	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	102360524	102363068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_56463_7	chr15	+	1233	5	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6541	-1	-251	1	3prime_fragment	FALSE	canonical	3	32	junction_1	46.916814683011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTCATCAATGTGTTT	NA	False	NA	14	True	AATAAA	-14	NA	102360342	102363066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_56465_3	chr15	+	2028	2	FSM	ENSMUSG00000023047.12	ENSMUST00000161376.2	364	2	101	-1765	101	3	multi-exon	FALSE	canonical	3	133	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAATGTGTTTTTACT	NA	False	NA	19	True	AATAAA	-19	NA	102360858	102363071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102360995_102361179
Isoform_56466_93	chr15	+	842	4	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	7062	-8	106	5	3prime_fragment	FALSE	canonical	3	123	junction_2	13.3666251038423	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAATGTGTTTTTACTTC	NA	False	NA	21	True	AATAAA	-21	NA	102360863	102363073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_56467_33	chr15	+	925	4	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6972	-1	16	1	3prime_fragment	FALSE	canonical	3	123	junction_2	13.3666251038423	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTCATCAATGTGTTT	NA	False	NA	14	True	AATAAA	-14	NA	102360773	102363066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_56468_7	chr15	+	498	2	ISM	ENSMUSG00000023047.12	ENSMUST00000162893.2	611	3	322	-86	158	1	3prime_fragment	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTCATCAATGTGTTT	NA	False	NA	14	True	AATAAA	-14	NA	102360915	102363066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102360995_102362647
Isoform_56469_156	chr15	+	1177	5	FSM	ENSMUSG00000023048.14	ENSMUST00000023810.12	1224	5	41	6	14	-6	multi-exon	FALSE	canonical	3	129	junction_1	259.364969685576	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTGGGCTAGTTTTG	2419	False	NA	34	True	AATAAA	-37	NA	102367650	102371235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102367691_102367898_102368017_102368542_102368582_102368804_102369155_102370605
Isoform_56470_293	chr15	+	1059	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	14	-18	14	-6	multi-exon	FALSE	canonical	3	427	junction_1	130.244215056008	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTGGGCTAGTTTTG	2419	False	NA	34	True	AATAAA	-37	NA	102367650	102371235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
Isoform_56474_143	chr15	+	1044	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	0	-24	0	-6	multi-exon	FALSE	canonical	3	623	junction_2	60	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTGGGCTAGTTTTG	3286	False	NA	34	True	AATAAA	-37	NA	102368517	102371235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102368582_102368804_102369155_102370605
Isoform_56475_15	chr15	+	1911	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	-867	-24	14	-6	multi-exon	FALSE	canonical	3	623	junction_2	60	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTGGGCTAGTTTTG	2419	False	NA	34	True	AATAAA	-37	NA	102367650	102371235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102368582_102368804_102369155_102370605
Isoform_56479_12	chr15	+	2122	2	NIC	ENSMUSG00000023048.14	novel	1020	3	NA	NA	14	4	intron_retention	FALSE	canonical	3	623	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCATTACCTTGACT	2419	False	NA	22	True	AATAAA	-25	NA	102367650	102371223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102369155_102370605
Isoform_56481_13	chr15	+	1820	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	1	26	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	164.508730616279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGGATGCCACAGTGA	2010	False	NA	31	True	ATTAAA	-31	NA	102378974	102407342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56483_3	chr15	+	1573	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	-1	6	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	167.777321446722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTCTTTGTGAATA	2234	False	NA	11	True	ATTAAA	-11	NA	102379198	102407322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_56484_4	chr15	+	1492	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229802.2	1215	14	-9	-268	-1	7	multi-exon	FALSE	non_canonical	0	0	junction_7	168.031977796282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTCTTTGTGAATAG	2226	False	NA	12	True	ATTAAA	-12	NA	102379190	102407323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56485_3	chr15	+	1724	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	3	28	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	171.496855940956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATGCCACAGTGACT	2012	False	NA	33	True	ATTAAA	-33	NA	102378976	102407344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_56486_3	chr15	+	1465	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	-6	5	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	171.496855940956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTTTTCTTTGTGAAT	2248	False	NA	10	True	ATTAAA	-10	NA	102379212	102407321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_56487_20	chr15	+	1832	15	FSM	ENSMUSG00000056851.15	ENSMUST00000077037.13	2952	15	-13	1133	-2	47	multi-exon	FALSE	canonical	3	59	junction_1	143.98145076108	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACGTGGGTGTTGTTCCTG	2007	False	NA	52	True	AATAGA	-20	NA	102378971	102407363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56490_10	chr15	+	1825	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	1	46	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	148.572184064013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGTGGGTGTTGTTCCT	2010	False	NA	51	True	AATAGA	-19	NA	102378974	102407362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_56494_12	chr15	+	1693	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	-113	-4	1	4	multi-exon	FALSE	canonical	3	59	junction_1	146.176678378513	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTTTTTCTTTGTGAA	2010	False	NA	9	True	ATTAAA	-9	NA	102378974	102407320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56498_3	chr15	+	1697	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	-2	8	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	151.135778916308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2007	False	NA	13	True	ATTAAA	-13	NA	102378971	102407324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_56499_3	chr15	+	1665	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	-25	46	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	151.135778916308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGTGGGTGTTGTTCCT	2077	False	NA	51	True	AATAGA	-19	NA	102379041	102407362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_565_402	SIRV2	-	2051	11	FSM	SIRV2A	SIRV201	2051	11	1	-1	1	1	multi-exon	FALSE	canonical	3	240	junction_6	997.649657946115	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAACGTGGCATGCGT	NA	False	NA	NA	False	NA	NA	NA	5906	999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
Isoform_56501_13	chr15	+	1816	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	1	46	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	165.568162176581	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGTGGGTGTTGTTCCT	2010	False	NA	51	True	AATAGA	-19	NA	102378974	102407362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56503_4	chr15	+	1809	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	5	46	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	168.78329603491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGTGGGTGTTGTTCCT	2014	False	NA	51	True	AATAGA	-19	NA	102378978	102407362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_56504_8	chr15	+	1480	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	-5	42	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	169.151939682124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTACGTGGGTGTTGT	2249	False	NA	47	True	AATAGA	-15	NA	102379213	102407358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56505_3	chr15	+	1523	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	-35	28	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	169.151939682124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATGCCACAGTGACT	2192	False	NA	33	True	ATTAAA	-33	NA	102379156	102407344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56506_6	chr15	+	1683	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	1	6	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	169.151939682124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTCTTTGTGAATA	2010	False	NA	11	True	ATTAAA	-11	NA	102378974	102407322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56507_5	chr15	+	1466	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	-1	8	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	172.556962552787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2226	False	NA	13	True	ATTAAA	-13	NA	102379190	102407324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_56508_8	chr15	+	1808	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	1	50	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	145.271894974175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTGTTGTTCCTGTCT	2010	False	NA	55	True	AATAGA	-23	NA	102378974	102407366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56511_6	chr15	+	1787	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	0	31	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	149.78596975249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGCCACAGTGACTTAC	2009	False	NA	36	True	ATTAAA	-36	NA	102378973	102407347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_56512_10	chr15	+	1669	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	147.555385248985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTCTTTGTGAATA	2012	False	NA	11	True	ATTAAA	-11	NA	102378976	102407322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56514_4	chr15	+	1472	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	-19	8	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	152.427342280039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2208	False	NA	13	True	ATTAAA	-13	NA	102379172	102407324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_56515_3	chr15	+	1632	13	NIC	ENSMUSG00000056851.15	novel	2571	13	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	170.878042929908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTCTTTGTGAATA	2010	False	NA	11	True	ATTAAA	-11	NA	102378974	102407322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
Isoform_56519_3	chr15	+	1451	13	ISM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	2628	-46	0	46	3prime_fragment	FALSE	canonical	3	186	junction_2	130.806366647635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGTGGGTGTTGTTCCT	4751	False	NA	51	True	AATAGA	-19	NA	102381715	102407362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56523_5	chr15	+	1276	10	ISM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	3920	-48	-43	48	3prime_fragment	FALSE	canonical	3	231	junction_3	119.145102944081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGGGTGTTGTTCCTGT	6043	False	NA	53	True	AATAGA	-21	NA	102383007	102407364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_56540_3	chr15	+	1728	2	ISM	ENSMUSG00000056851.15	ENSMUST00000230631.2	585	3	1132	-1449	1132	4	3prime_fragment	FALSE	canonical	3	634	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGAGTGTCTTTCATG	4987	False	NA	NA	False	NA	NA	NA	102399087	102408500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102399239_102406923
Isoform_56543_23	chr15	+	1695	8	ISM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-41	3	-9	-1	intron_retention	FALSE	canonical	3	312	junction_3	28	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCCCTTGTTCTTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	102426852	102432108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
Isoform_56544_318	chr15	+	1564	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-42	1	-10	1	multi-exon	FALSE	canonical	3	312	junction_3	28.7706447616316	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426851	102432110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_56546_30	chr15	+	1668	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-146	1	-44	1	multi-exon	FALSE	canonical	3	312	junction_3	28.7706447616316	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426747	102432110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_56548_9	chr15	+	1794	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-273	2	-6	0	multi-exon	TRUE	canonical	3	312	junction_3	28.7706447616316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426620	102432109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_56555_15	chr15	+	2240	7	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	-9	1	intron_retention	FALSE	canonical	3	365	junction_3	15.4209453522005	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426852	102432110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102427038_102427556_102427727_102428909_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
Isoform_56559_28	chr15	+	1435	8	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	125.715584408876	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426877	102432110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102427038_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_56562_7	chr15	+	1254	7	FSM	ENSMUSG00000023051.12	ENSMUST00000100168.10	1278	7	97	-73	-1	1	multi-exon	FALSE	canonical	2	5	junction_1	143.475510879809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426888	102432110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102427038_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_56564_56	chr15	+	1497	9	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	96.5083383703191	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102427160	102432110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_56568_9	chr15	+	1375	8	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	148.535435200507	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102427179	102432110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102427280_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_56569_8	chr15	+	1723	8	ISM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	316	3	-24	-1	3prime_fragment	FALSE	canonical	3	312	junction_2	30.5647522750088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCCCTTGTTCTTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	102427209	102432108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_56571_78	chr15	+	2468	2	FSM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	-8	1	-8	-1	multi-exon	FALSE	canonical	3	47	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTGCTTGGGATCCT	NA	False	NA	16	True	AATAAA	-24	NA	102829529	102837248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102830353_102835603
Isoform_56574_15	chr15	+	3203	2	FSM	ENSMUSG00000050328.3	ENSMUST00000055562.3	1031	2	71	-2243	71	2243	multi-exon	FALSE	canonical	3	24	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGATGTTTTGAGAAC	NA	False	NA	18	True	ATTAAA	-15	NA	102845262	102849287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102845892_102846713
Isoform_56575_13	chr15	+	1753	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	229	1	229	-1	multi-exon	FALSE	canonical	3	38	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCAATGTCTGATGGTTT	6201	False	NA	29	True	AATAAA	-23	NA	102943049	102945277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102943588_102944062
Isoform_56576_4	chr15	+	2142	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	-159	0	-159	0	multi-exon	FALSE	canonical	3	38	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAATGTCTGATGGTTTC	5813	False	NA	30	True	AATAAA	-24	NA	102942661	102945278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_102943588_102944062
Isoform_56579_2113	chr15	+	1918	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	1	-1	1	1	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAATGACAACTGTATGG	NA	False	NA	0	True	AATAAA	-18	NA	103148859	103153383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
Isoform_56591_7539	chr15	+	1758	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	-21	0	1	0	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	7539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148859	103153382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
Isoform_56600_313	chr15	+	1280	11	FSM	ENSMUSG00000046434.17	ENSMUST00000230171.2	1283	11	1	2	1	-2	multi-exon	FALSE	canonical	3	551	junction_9	4985.84843431888	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148859	103155117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103154772_103154849_103154971
Isoform_56651_1422	chr15	+	1681	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	-10	5	-1	-2	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	1422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTTTGTGTGATGGC	NA	False	NA	27	True	AATAAA	-15	NA	103181326	103208290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
Isoform_56661_13	chr15	+	4780	31	FSM	ENSMUSG00000022488.10	ENSMUST00000047405.9	4725	31	-56	1	-23	0	multi-exon	TRUE	canonical	3	15	junction_9	3.63027394130097	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCGTGGATGTTTGCT	NA	False	NA	9	True	ATTAAA	-23	NA	103362197	103407236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_103362409_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
Isoform_56665_33	chr15	+	3093	16	FSM	ENSMUSG00000022489.7	ENSMUST00000023132.5	3218	16	125	0	-118	0	multi-exon	FALSE	canonical	2	9	junction_2	5.10163372525573	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTGTGGTGTTCAT	NA	False	NA	9	True	AATAAA	-15	NA	103411585	103438479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_103411800_103411887_103412011_103428375_103428490_103429732_103429916_103430079_103430147_103430471_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
Isoform_56667_3	chr15	+	2417	11	ISM	ENSMUSG00000022489.7	ENSMUST00000227955.2	3258	15	7100	0	-1698	0	3prime_fragment	FALSE	canonical	2	14	junction_8	3.36005952328229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTGTGGTGTTCAT	NA	False	NA	9	True	AATAAA	-15	NA	103430446	103438479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
Isoform_56668_6	chr15	+	1203	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	29	at_least_one_novel_splicesite	FALSE	canonical	3	222	junction_1	230.452251019598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGCTGTCCTGGAAC	35	False	NA	NA	False	NA	NA	NA	10486134	10493478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_10486368_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
Isoform_56669_59	chr15	+	2261	2	NNC	ENSMUSG00000044250.9	novel	1790	2	NA	NA	15477	10	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGTTCTGCCTGTTGT	NA	False	NA	24	True	AATAAA	-25	NA	97274574	97283571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_97275170_97281905
Isoform_5667_382	chr10	+	3212	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-11	2236	1	0	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2794	False	NA	9	True	AATAAA	-17	NA	20188218	20216009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
Isoform_56673_90	chr15	+	2258	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	15477	10	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGTTCTGCCTGTTGT	NA	False	NA	24	True	AATAAA	-25	NA	97274574	97283571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_97275170_97281908
Isoform_56677_4	chr15	+	2315	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	15406	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTGTTTCCAAAAGTG	NA	False	NA	10	True	AATAAA	-11	NA	97274503	97283557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_97275170_97281908
Isoform_56679_102	chr15	+	886	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	6062	-7	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	92.1013934024164	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACAGACTCTGTACT	NA	False	NA	14	True	AATAAA	-14	NA	83454137	83458397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_83454247_83455585_83455797_83456400_83456540_83457970
Isoform_5668_338	chr10	+	5449	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-11	-1	1	1	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTGGTCTCTGTTTGCC	2794	False	NA	15	True	AATAAA	-16	NA	20188218	20218246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
Isoform_56680_37	chr15	+	1701	7	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4137	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	64.6838465151849	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	NA	False	NA	12	True	TATAAA	-21	NA	101126205	101130637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_101126281_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_56681_24	chr15	+	1723	7	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4115	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	64.6838465151849	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	NA	False	NA	12	True	TATAAA	-21	NA	101126183	101130637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_101126281_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_56683_43	chr15	+	1685	9	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	-6411	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	42.0979141407267	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTCTGCCCCCTGGT	8459	False	NA	4	True	AATAAA	-14	NA	84547409	84587873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_84547463_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
Isoform_56684_14	chr15	+	1560	8	NNC	ENSMUSG00000036106.16	novel	1719	9	NA	NA	-6408	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	49.7864828799045	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCCTGTCTGCCCCCTG	8462	False	NA	2	True	AATAAA	-12	NA	84547412	84587871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_84547463_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
Isoform_56685_16	chr15	+	274	3	Intergenic	novelGene_3862	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_1	14.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTGTCTTGCCTTAAT	NA	False	NA	10	True	NA	NA	NA	41210851	41215816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_41210883_41214473_41214592_41215691
Isoform_56686_6	chr15	+	662	4	Intergenic	novelGene_3859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	22.573337271116	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAATGTCTGTTTACTGC	NA	False	NA	NA	False	AATATA	-16	NA	41210834	41223223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_41210883_41214473_41214592_41222277_41222360_41222809
Isoform_56687_7	chr15	+	690	5	Intergenic	novelGene_3858	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_4	22.6315598225133	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTATATGGAAAACTT	NA	False	NA	NA	False	AATAAA	-22	NA	41210828	41229915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_41210883_41214473_41214592_41222277_41222360_41222809_41223059_41229728
Isoform_56688_11	chr15	+	3264	3	Intergenic	novelGene_3860	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATCTTTGTCTTGCCTT	NA	False	NA	7	True	NA	NA	NA	41210851	41215813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_41210883_41212202_41212325_41212702
Isoform_56689_17	chr15	+	1572	4	Intergenic	novelGene_3861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_3	2.94392028877595	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTGTCTTGCCTTAA	NA	False	NA	9	True	NA	NA	NA	41210851	41215815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_41210883_41212202_41212325_41212702_41212780_41214473
Isoform_56693_29	chr15	+	5756	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-2447	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	160.492913259781	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	1158	False	NA	14	True	AATAAA	-15	NA	25756403	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_25756451_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_56694_53	chr15	+	1007	8	NNC	ENSMUSG00000023039.18	novel	3563	8	NA	NA	2701	2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	10.6885404971485	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCATCGGCTAGCTAG	NA	False	NA	8	True	AATAAA	-15	NA	101313030	101325672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_101313056_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
Isoform_56695_40	chr15	+	2332	19	NNC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12576	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	22.6396898290492	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98018922	98030328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_98018951_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
Isoform_56697_15	chr15	+	2765	2	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4777	2246	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTTTTGAGAACCAT	NA	False	NA	21	True	ATTAAA	-18	NA	102840414	102849290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_102840603_102846713
Isoform_56698_3	chr15	+	2846	2	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4859	2245	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATGTTTTGAGAACCA	NA	False	NA	20	True	ATTAAA	-17	NA	102840332	102849289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_102840603_102846713
Isoform_56700_3	chr15	+	3733	7	NNC	ENSMUSG00000059895.14	novel	6459	4	NA	NA	-47460	-2	intron_retention	FALSE	canonical	2	10	junction_3	48.7544869729956	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTGTGTGAAGAGTGT	NA	False	NA	17	True	AATAAA	-11	NA	73547533	73629073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_73547681_73549310_73549460_73569915_73569999_73622977_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_56701_30	chr15	+	3649	15	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	-298	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6.13787173112595	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGAACTCAGTACTTTT	NA	False	NA	8	True	AATAAA	-9	NA	99122443	99140699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_99122585_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
Isoform_56702_26	chr15	+	4260	33	NNC	ENSMUSG00000022191.17	novel	3248	20	NA	NA	-3768	-45	intron_retention	FALSE	canonical	3	27	junction_1	142.947648716016	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	55	False	NA	-16	True	AATAAA	-12	NA	12833667	12935331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_12833700_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
Isoform_56704_24	chr15	+	3502	19	NNC	ENSMUSG00000037617.13	novel	3646	19	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.4173998513349	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCCTGCGTGTCTGTAT	121	False	NA	NA	False	AATAAA	-25	NA	36179452	36235767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_36179524_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
Isoform_56707_32	chr15	+	2399	7	NNC	ENSMUSG00000023034.8	novel	893	2	NA	NA	1194	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	68.8486665730636	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGAGTCTTTTTTTCTGT	NA	False	NA	17	True	AATAAA	-19	NA	101165920	101172674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_101165971_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_56708_18	chr15	+	5965	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	1851	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	161.809454565476	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	31	False	NA	14	True	AATAAA	-15	NA	25754915	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_25755172_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_56710_3	chr15	+	2100	8	NNC	ENSMUSG00000059895.14	novel	6459	4	NA	NA	-47872	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.3579027298292	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGTGTGAAGAGTGTT	NA	False	NA	18	True	AATAAA	-12	NA	73547121	73629074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_73547205_73547439_73547681_73549310_73549460_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_56711_3	chr15	+	2174	9	NNC	ENSMUSG00000059895.14	novel	6459	4	NA	NA	-47864	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	48.5173937882075	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTGTGTGAAGAGTGT	NA	False	NA	17	True	AATAAA	-11	NA	73547129	73629073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_73547205_73547439_73547681_73549310_73549460_73569915_73569999_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_56713_25	chr15	+	2593	2	NNC	ENSMUSG00000022623.18	novel	7365	22	NA	NA	259	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATGTCTCAGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	89441163	89444461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_89441233_89441937
Isoform_56715_9	chr15	+	6051	24	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	75.9257671492509	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGAGAGTGTCTAAT	NA	False	NA	17	True	AATAAA	-17	NA	58287312	58329590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_58288113_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
Isoform_56723_15	chr15	+	3014	13	NNC	ENSMUSG00000023018.6	novel	810	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	105.979918171112	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTGCTGTCTGGAGGG	8014	False	NA	26	True	AATAAA	-17	NA	99600482	99611872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_99600561_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605521_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
Isoform_56724_15	chr15	+	5732	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-2741	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	163.694389964302	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	864	False	NA	14	True	AATAAA	-15	NA	25756109	25813757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_25756133_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_56726_7	chr15	+	3627	24	NNC	ENSMUSG00000023032.13	novel	374	2	NA	NA	-992	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	9.13643695054198	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTCTCTGATACTC	3523	False	NA	11	True	ATTAAA	-19	NA	100678142	100713816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_100678323_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
Isoform_56729_5	chr15	+	591	2	Intergenic	novelGene_3835	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTTAGTCGTG	NA	False	NA	NA	False	NA	NA	NA	36560536	36566200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_36560637_36565709
Isoform_5673_223	chr10	+	3069	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	4	2234	1	1	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTAACTATCAACTTT	2794	False	NA	13	True	AATAAA	-21	NA	20188218	20216013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
Isoform_56730_8	chr15	+	1425	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	18.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCACGGAATCCTAGCC	4044	False	NA	1	True	AATAAA	-19	NA	98997313	99002616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_98997366_98998703_98999657_99002196
Isoform_56731_3	chr15	+	1530	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	-75	7	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	18.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCTAGCCCAGGATATT	3948	False	NA	10	True	AATAAA	-28	NA	98997217	99002625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_98997366_98998703_98999657_99002196
Isoform_56734_6	chr15	+	1460	6	NNC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-12101	-49	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	16.4608626748418	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGATTAGCTGAATATT	NA	False	NA	8	True	ATTAAA	-19	NA	39510860	39545800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_39510965_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
Isoform_56735_5	chr15	+	3427	6	NNC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-12099	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	16.4608626748418	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTGAGGGTGCTGT	NA	False	NA	5	True	AATAAA	-15	NA	39510862	39547769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_39510965_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
Isoform_56737_9	chr15	+	2692	2	NNC	ENSMUSG00000050846.10	novel	2486	2	NA	NA	87	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTGTAATTGGCATAT	NA	False	NA	11	True	AATAAA	-17	NA	75812887	75821250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_75813301_75818971
Isoform_56741_7	chr15	+	2952	14	NNC	ENSMUSG00000018008.9	novel	1223	3	NA	NA	-5177	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.18671143234935	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTATTCTTCTGTAAT	NA	False	NA	NA	False	AATAAA	-28	NA	78476069	78506221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_78476226_78480604_78480781_78486892_78486976_78488835_78488901_78490046_78490114_78491156_78491276_78492325_78492407_78493961_78494075_78495648_78495798_78499916_78500029_78502575_78502653_78503461_78503534_78503988_78504144_78504694
Isoform_56742_8	chr15	+	2815	15	NNC	ENSMUSG00000022489.7	novel	923	3	NA	NA	3386	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.54497782226017	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTGTGGTGTTCAT	NA	False	NA	9	True	AATAAA	-15	NA	103426732	103438479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_103426792_103428375_103428490_103429732_103429916_103430079_103430147_103430471_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
Isoform_56744_5	chr15	+	3197	12	NNC	ENSMUSG00000022619.6	novel	382	2	NA	NA	-319	-2024	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	26.5264564644806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGCTGTTTTTAAG	2068	False	NA	13	True	AATAAA	-13	NA	89338925	89346647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_89338962_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_56745_7	chr15	+	894	4	NNC	ENSMUSG00000022583.13	novel	877	4	NA	NA	-46	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.74165738677394	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGATCTCAGTTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	75140223	75144085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_75140299_75140550_75140649_75141628_75141746_75143481
Isoform_56746_4	chr15	+	2550	4	NNC	ENSMUSG00000116114.2	novel	833	4	NA	NA	-35	17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGATCCTTTCAATAT	888	False	NA	NA	False	AATAAA	-23	NA	101262585	101303732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_101262699_101264782_101265322_101301319_101301441_101301955
Isoform_56747_6	chr15	+	2596	10	NNC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	48032	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.9173403195142	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTCTTTTTATTGCA	NA	False	NA	6	True	AATAAA	-15	NA	86167737	86382702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_86167857_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
Isoform_56748_4	chr15	+	2774	13	NNC	ENSMUSG00000078932.9	novel	2041	13	NA	NA	-12	716	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.15719207326496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATTTCTCTTGATAA	NA	False	NA	NA	False	ATTAAA	-12	NA	91083684	91145813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_91083807_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91124845_91125023_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
Isoform_5675_139	chr10	+	5301	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	4	2	1	0	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2794	False	NA	14	True	AATAAA	-15	NA	20188218	20218245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
Isoform_56750_5	chr15	+	1525	2	NNC	ENSMUSG00000051225.10	novel	529	2	NA	NA	-20	-321	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAATTAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	57865521	57874084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_57865908_57872945
Isoform_56751_4	chr15	+	1881	3	NNC	ENSMUSG00000022346.18	novel	1765	2	NA	NA	-6213	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATTGGGCCAAC	NA	False	NA	NA	False	AATAAA	-10	NA	61851026	61862202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_61851128_61859355_61860128_61861194
Isoform_56754_3	chr15	+	1029	6	NNC	ENSMUSG00000023047.12	novel	611	3	NA	NA	-176	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	60.7302231183123	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAATGTGTTTTTACTT	NA	False	NA	20	True	AATAAA	-20	NA	102360417	102363072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_102360449_102360583_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_56756_3	chr15	+	4653	2	NNC	ENSMUSG00000042428.7	novel	4665	2	NA	NA	-2122	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCGTGTGTGCTGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	80055799	80099719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_80055907_80095173
Isoform_56757_4	chr15	+	3019	4	NNC	ENSMUSG00000022286.17	novel	4947	16	NA	NA	11912	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	32.782108941718	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAACAGCTCTCTAGTAC	127	False	NA	14	True	AATAAA	-15	NA	37347892	37363807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_37347934_37348012_37348099_37358613_37358679_37360980
Isoform_56760_3	chr15	+	1862	1	Intergenic	novelGene_3748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3053638	3055500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_3053600_3055500
Isoform_56762_38	chr15	+	5265	1	Intergenic	novelGene_3888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	55735024	55740289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_55735000_55740300
Isoform_56763_630	chr15	+	5231	1	Intergenic	novelGene_3890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	630	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	55735056	55740287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_55735100_55740300
Isoform_56768_13	chr15	-	2839	1	Intergenic	novelGene_3889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTATTGTTGCGACAC	NA	False	NA	NA	False	NA	NA	NA	55737894	55735055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_55735100_55737900
Isoform_56779_4	chr13	-	1382	1	Intergenic	novelGene_2905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	2627	False	NA	NA	False	NA	NA	NA	8813375	8811993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_8812000_8813400
Isoform_56784_3	chr15	+	175	1	Intergenic	novelGene_3891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTCCCCCATAA	NA	False	NA	NA	False	NA	NA	NA	55797374	55797549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_55797400_55797500
Isoform_56785_10	chr15	+	248	1	Intergenic	novelGene_3892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAATGTTGCAATTTTCA	NA	False	NA	NA	False	NA	NA	NA	56577542	56577790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_56577500_56577800
Isoform_56786_15	chr15	-	176	1	Intergenic	novelGene_3893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACATTCTGAATGT	NA	False	NA	NA	False	NA	NA	NA	56589342	56589166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_56589200_56589300
Isoform_56788_66	chr15	+	181	1	Intergenic	novelGene_3759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTTAAAAATTTT	1989	False	NA	NA	False	NA	NA	NA	8115662	8115843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_8115700_8115800
Isoform_56790_88	chr15	+	180	1	Intergenic	novelGene_3894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAAACCCAT	NA	False	NA	NA	False	NA	NA	NA	57623326	57623506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_57623300_57623500
Isoform_56793_26	chr15	+	177	1	Intergenic	novelGene_3895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57772551	57772728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_57772600_57772700
Isoform_56794_15	chr15	+	175	1	Intergenic	novelGene_3896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGTTGAGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	57773767	57773942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_57773800_57773900
Isoform_56799_37	chr15	-	206	1	Intergenic	novelGene_3903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATGAAAGGTAAACAAT	NA	False	NA	NA	False	NA	NA	NA	57899460	57899254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_57899300_57899500
Isoform_56802_556	chr16	-	177	1	Intergenic	novelGene_4493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32923621	32923444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_32923400_32923600
Isoform_56812_12	chr15	-	243	1	Intergenic	novelGene_3905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAGTAACCAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	58002614	58002371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_58002400_58002600
Isoform_56815_7	chr15	-	784	1	Intergenic	novelGene_3906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATATGG	6725	False	NA	NA	False	NA	NA	NA	58027617	58026833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_58026800_58027600
Isoform_56818_148	chr15	+	177	1	Intergenic	novelGene_3907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	58244917	58245094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_58244900_58245100
Isoform_56828_83	chr15	+	192	1	Intergenic	novelGene_3908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGATAGGTAATGTGAA	NA	False	NA	NA	False	NA	NA	NA	58631009	58631201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_58631000_58631200
Isoform_56829_43	chr15	-	220	1	Intergenic	novelGene_3909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTGTCTGGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	58637506	58637286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_58637300_58637500
Isoform_56835_23	chr15	-	174	1	Intergenic	novelGene_3910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGGAAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	58737503	58737329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_58737300_58737500
Isoform_56837_42	chr15	+	1606	1	FSM	ENSMUSG00000037085.9	ENSMUST00000036937.9	4454	1	5	2843	5	-2843	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGAATTCTGCATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	58744527	58746133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_58744500_58746100
Isoform_56847_8	chr15	+	670	1	Intergenic	novelGene_3911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	208	False	NA	NA	False	NA	NA	NA	58899783	58900453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_58899800_58900500
Isoform_56849_20	chr15	-	175	1	Intergenic	novelGene_3912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	59180697	59180522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_59180500_59180700
Isoform_56853_5	chr15	-	1974	1	Antisense	novelGene_ENSMUSG00000022142.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAGAGAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	8190860	8188886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_8188900_8190900
Isoform_56854_13	chr15	-	197	1	Intergenic	novelGene_3913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	59193644	59193447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_59193400_59193600
Isoform_56855_15	chr15	-	159	1	Intergenic	novelGene_3915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	59542329	59542170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_59542200_59542300
Isoform_56856_8	chr15	-	184	1	Intergenic	novelGene_3916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGTAATTTCT	NA	False	NA	NA	False	NA	NA	NA	59740669	59740485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_59740500_59740700
Isoform_56857_5	chr15	-	176	1	Intergenic	novelGene_3917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAGTGTACTAGAGA	NA	False	NA	NA	False	NA	NA	NA	59954945	59954769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_59954800_59954900
Isoform_56858_7	chr15	-	165	1	Intergenic	novelGene_3760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAATAAGAAT	NA	False	NA	NA	False	NA	NA	NA	8193263	8193098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_8193100_8193300
Isoform_56859_13	chr15	-	2316	1	Intergenic	novelGene_3918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGATATAAACAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	60466278	60463962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_60464000_60466300
Isoform_56860_12	chr15	-	4910	1	NIC	ENSMUSG00000072568.5	novel	5565	2	NA	NA	853	-324	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTTCCTCTTTACTC	NA	False	NA	-3	True	AATAAA	-19	NA	60696076	60691166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_60691200_60696100
Isoform_56863_3	chr15	+	2687	1	FSM	ENSMUSG00000097493.4	ENSMUST00000192865.2	2657	1	-14	-16	-14	16	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCTGGTGAATATATT	NA	False	NA	NA	False	ATTAAA	-14	NA	60694787	60697474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_60694800_60697500
Isoform_56867_11	chr1	+	173	1	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACACCAC	NA	False	NA	NA	False	NA	NA	NA	36663454	36663627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36663500_36663600
Isoform_56868_7	chr15	-	1014	1	Intergenic	novelGene_3920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAATACTCAACTGGAGA	NA	False	NA	NA	False	NA	NA	NA	61926354	61925340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_61925300_61926400
Isoform_56869_3	chr15	-	3819	1	Intergenic	novelGene_3921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCCAATACT	NA	False	NA	NA	False	NA	NA	NA	61929169	61925350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_61925400_61929200
Isoform_5687_191	chr10	+	3222	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-64	-16	1	13	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTTTTAAAAACATTTG	2794	False	NA	25	True	AATAAA	-33	NA	20188218	20216025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
Isoform_56870_36	chr15	-	3177	1	Intergenic	novelGene_3922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61935804	61932627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_61932600_61935800
Isoform_56871_7	chr15	-	3325	1	Intergenic	novelGene_3923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61935952	61932627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_61932600_61936000
Isoform_56877_8	chr15	+	282	1	Intergenic	novelGene_3761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAATTTAAAAAATTAGGC	NA	False	NA	NA	False	NA	NA	NA	8214209	8214491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_8214200_8214500
Isoform_56878_5	chr15	+	2352	1	Intergenic	novelGene_3924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63928497	63930849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_63928500_63930800
Isoform_5688_118	chr10	+	5442	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-64	-2236	1	0	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2794	False	NA	14	True	AATAAA	-15	NA	20188218	20218245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
Isoform_56880_328	chr15	-	190	1	Intergenic	novelGene_3762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8227518	8227328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_8227300_8227500
Isoform_56881_6	chr15	+	1898	1	Intergenic	novelGene_3925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2124	False	NA	NA	False	GGGGCT	-43	NA	64026214	64028112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_64026200_64028100
Isoform_56882_5	chr15	+	5191	1	Intergenic	novelGene_3926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACACGACTTATAAATT	NA	False	NA	NA	False	AAAACA	-34	NA	64125019	64130210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_64125000_64130200
Isoform_56884_5	chr15	+	183	1	Intergenic	novelGene_3927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAGATAGGGGA	NA	False	NA	NA	False	NA	NA	NA	65061665	65061848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_65061700_65061800
Isoform_56885_19	chr15	+	174	1	Intergenic	novelGene_3928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAGAGAGAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	65584413	65584587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_65584400_65584600
Isoform_56889_11	chr15	-	177	1	Intergenic	novelGene_3929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	65806026	65805849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_65805800_65806000
Isoform_56890_7	chr15	+	1145	1	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	-4	-26477	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	3846	False	NA	NA	False	NA	NA	NA	66449424	66450569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_66449400_66450600
Isoform_56891_8	chr15	+	177	1	Intergenic	novelGene_3763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	8290496	8290673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_8290500_8290700
Isoform_56893_3	chr15	-	2138	2	Intergenic	novelGene_3930	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	68130447	68128287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_68129117_68129138
Isoform_56895_1364	chr15	+	549	1	FSM	ENSMUSG00000068397.5	ENSMUST00000089785.5	483	1	-36	-30	-36	30	mono-exon	FALSE	NA	NA	NA	NA	NA	1364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	68181631	68182180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_68181600_68182200
Isoform_56898_3	chr15	-	4165	1	Intergenic	novelGene_3931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCCTTCTCCTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	68219775	68215610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_68215600_68219800
Isoform_56899_26	chr15	-	178	1	Intergenic	novelGene_3932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	68862559	68862381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_68862400_68862600
Isoform_56900_24	chr15	-	177	1	Intergenic	novelGene_3933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACACTA	NA	False	NA	NA	False	NA	NA	NA	70004208	70004031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_70004000_70004200
Isoform_56902_20	chr15	+	179	1	Intergenic	novelGene_3934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGTATTCATTC	NA	False	NA	NA	False	NA	NA	NA	70386521	70386700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_70386500_70386700
Isoform_56903_5	chr15	-	162	1	Intergenic	novelGene_3764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAGAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8334084	8333922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_8333900_8334100
Isoform_56905_19	chr15	+	155	1	Intergenic	novelGene_3935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	71516302	71516457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_71516300_71516500
Isoform_56906_9	chr15	-	205	2	Intergenic	novelGene_4253	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103281467	103184690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_103184701_103281272
Isoform_56908_9	chr15	-	4433	1	FSM	ENSMUSG00000106847.2	ENSMUST00000202826.2	4725	1	292	0	292	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGGGAAAGTTCTTTG	NA	False	NA	2	True	AATAAA	-27	NA	72681881	72677448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_72677400_72681900
Isoform_56910_26	chr4	-	187	1	Intergenic	novelGene_7394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAATATCC	NA	False	NA	NA	False	NA	NA	NA	4969879	4969692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_4969700_4969900
Isoform_56913_4	chr15	+	191	1	Intergenic	novelGene_3936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACCACAG	NA	False	NA	NA	False	NA	NA	NA	72870551	72870742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_72870600_72870700
Isoform_56914_133	chr4	+	177	1	Intergenic	novelGene_8060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	136112285	136112462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_136112300_136112500
Isoform_5692_68	chr10	+	5296	12	NIC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	221	junction_3	266.237450718882	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTGGTCTCTGTTTGCC	2794	False	NA	15	True	AATAAA	-16	NA	20188218	20218246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
Isoform_56939_13	chr15	-	4278	1	ISM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	84810	4	13929	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCCGAAGGTGTCCAG	NA	False	NA	-28	True	AATAAA	-31	NA	72971974	72967696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_72967700_72972000
Isoform_56965_3	chr15	+	176	1	Intergenic	novelGene_4227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	2275	False	NA	NA	False	NA	NA	NA	102108431	102108607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102108400_102108600
Isoform_56967_45	chr15	+	179	1	Intergenic	novelGene_3938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	73144988	73145167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_73145000_73145200
Isoform_56975_8	chr15	+	176	1	Intergenic	novelGene_3939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACATTAG	NA	False	NA	NA	False	NA	NA	NA	73310622	73310798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_73310600_73310800
Isoform_56976_3	chr15	-	179	1	Intergenic	novelGene_3940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73313541	73313362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_73313400_73313500
Isoform_56977_6	chr15	-	175	1	Intergenic	novelGene_3941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAAAAGATGCA	NA	False	NA	NA	False	NA	NA	NA	73316517	73316342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_73316300_73316500
Isoform_56978_41	chr15	-	202	1	Intergenic	novelGene_3942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACATTTTCACGGTGG	NA	False	NA	NA	False	NA	NA	NA	73322865	73322663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_73322700_73322900
Isoform_56980_8	chr15	-	170	1	Intergenic	novelGene_3943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTTCCCAA	NA	False	NA	NA	False	NA	NA	NA	73335723	73335553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_73335600_73335700
Isoform_56982_3	chr15	-	177	1	Intergenic	novelGene_3944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	73344018	73343841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_73343800_73344000
Isoform_56983_4	chr5	+	181	1	Intergenic	novelGene_9092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATAAGGAG	437	False	NA	NA	False	NA	NA	NA	142818499	142818680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_142818500_142818700
Isoform_56984_20	chr15	-	177	1	Intergenic	novelGene_3945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATTAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	73392281	73392104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_73392100_73392300
Isoform_56989_4	chr15	-	169	1	Intergenic	novelGene_3946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATTACATCTAAGC	NA	False	NA	NA	False	NA	NA	NA	73527331	73527162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_73527200_73527300
Isoform_56990_7	chr15	-	1189	1	Intergenic	novelGene_3947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAGAAAAAAAGAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	73534288	73533099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_73533100_73534300
Isoform_56991_3	chr15	-	159	1	Intergenic	novelGene_3948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73586233	73586074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_73586100_73586200
Isoform_56999_577	chr15	-	846	1	FSM	ENSMUSG00000082585.4	ENSMUST00000120421.2	648	1	-105	-93	-105	93	mono-exon	FALSE	NA	NA	NA	NA	NA	577	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTAAGATTTGTTT	NA	False	NA	NA	False	AAGAAA	-15	NA	73966287	73965441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_73965400_73966300
Isoform_57007_17	chr15	+	851	1	FSM	ENSMUSG00000022587.15	ENSMUST00000191439.2	815	1	-35	-1	-5	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	8382	False	NA	NA	False	NA	NA	NA	74827496	74828347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_74827500_74828300
Isoform_57009_3	chr15	+	193	1	Intergenic	novelGene_3949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATAAGTCTGGCTCT	1373	False	NA	NA	False	NA	NA	NA	74927543	74927736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_74927500_74927700
Isoform_57010_4	chr15	-	804	1	Intergenic	novelGene_3950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAATAAAGAAGGAAAGAGA	424	False	NA	NA	False	NA	NA	NA	74958896	74958092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_74958100_74958900
Isoform_57011_5	chr15	+	198	1	Intergenic	novelGene_3951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAAGGCTCCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	75419845	75420043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_75419800_75420000
Isoform_57012_40	chr15	-	2821	1	FSM	ENSMUSG00000047591.6	ENSMUST00000062002.6	2739	1	-92	10	-92	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAACCTGGCTGTTGTGT	NA	False	NA	-12	True	AATAAA	-20	NA	75620169	75617348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75617300_75620200
Isoform_57014_28	chr15	+	168	1	Intergenic	novelGene_3765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAAAAAGTAGC	NA	False	NA	NA	False	NA	NA	NA	8483253	8483421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_8483300_8483400
Isoform_57015_4	chr15	+	1049	1	Intergenic	novelGene_3952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAAGT	9631	False	NA	NA	False	NA	NA	NA	75713939	75714988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_75713900_75715000
Isoform_57017_12	chr15	+	174	1	Intergenic	novelGene_3953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATAAGTAGAG	NA	False	NA	NA	False	NA	NA	NA	75718798	75718972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_75718800_75719000
Isoform_57019_32	chr15	-	177	1	Intergenic	novelGene_3955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGGT	6948	False	NA	NA	False	NA	NA	NA	75741372	75741195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_75741200_75741400
Isoform_57020_19	chr15	+	173	1	Intergenic	novelGene_3958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	75742656	75742829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_75742700_75742800
Isoform_57022_3	chr15	-	150	1	Intergenic	novelGene_3959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTCCTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	75754362	75754212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_75754200_75754400
Isoform_57023_6	chr15	+	2529	1	FSM	ENSMUSG00000103906.2	ENSMUST00000192937.2	4801	1	-96	2368	-96	-2368	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATGAGTGCTGACTGA	NA	False	NA	NA	False	ATTAAA	-29	NA	75781487	75784016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75781500_75784000
Isoform_57024_11	chr15	+	2401	1	FSM	ENSMUSG00000103906.2	ENSMUST00000192937.2	4801	1	26	2374	26	-2374	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGAACCCATGAGTGCT	NA	False	NA	NA	False	ATTAAA	-23	NA	75781609	75784010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_75781600_75784000
Isoform_57028_3	chr15	-	178	1	Intergenic	novelGene_3960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	75851020	75850842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_75850800_75851000
Isoform_57029_67	chr15	-	2053	1	FSM	ENSMUSG00000098176.3	ENSMUST00000182172.2	2584	1	531	0	518	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGTTGTCTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75853773	75851720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75851700_75853800
Isoform_57030_50	chr15	-	1291	1	FSM	ENSMUSG00000098176.3	ENSMUST00000182172.2	2584	1	500	793	487	-793	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGCTCTGACACTTGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	75853804	75852513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75852500_75853800
Isoform_57032_6	chr15	+	178	1	Intergenic	novelGene_3961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTATTGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	75858424	75858602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_75858400_75858600
Isoform_57033_633	chr15	-	172	1	Intergenic	novelGene_3962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	633	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACACACTCATTTC	8820	False	NA	NA	False	NA	NA	NA	75900760	75900588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_75900600_75900800
Isoform_57034_11	chr15	+	175	1	Intergenic	novelGene_3766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACATTATTTAT	NA	False	NA	NA	False	NA	NA	NA	8568701	8568876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_8568700_8568900
Isoform_57035_56	chr15	-	1031	1	FSM	ENSMUSG00000002524.18	ENSMUST00000228459.2	1008	1	-27	4	3	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	75952758	75951727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_75951700_75952800
Isoform_57036_8	chr15	-	176	1	Intergenic	novelGene_3963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTTAATTATAG	NA	False	NA	NA	False	NA	NA	NA	76033062	76032886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76032900_76033100
Isoform_57047_9	chr15	-	2860	1	ISM	ENSMUSG00000022565.16	ENSMUST00000054449.14	15018	33	26002	0	14210	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	NA	False	NA	-7	True	AATAAA	-18	NA	76058033	76055173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76055200_76058000
Isoform_57058_9	chr15	-	4156	1	ISM	ENSMUSG00000022565.16	ENSMUST00000054449.14	15018	33	24706	0	12914	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	NA	False	NA	-7	True	AATAAA	-18	NA	76059329	76055173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76055200_76059300
Isoform_57064_6	chr15	-	5048	1	ISM	ENSMUSG00000022565.16	ENSMUST00000054449.14	15018	33	23814	0	12022	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	9547	False	NA	-7	True	AATAAA	-18	NA	76060221	76055173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76055200_76060200
Isoform_57066_6	chr15	-	5834	1	ISM	ENSMUSG00000022565.16	ENSMUST00000054449.14	15018	33	23028	0	11236	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	9924	False	NA	-7	True	AATAAA	-18	NA	76061007	76055173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76055200_76061000
Isoform_57068_4	chr15	-	6898	1	ISM	ENSMUSG00000022565.16	ENSMUST00000054449.14	15018	33	21963	1	10171	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGTCTTGCCTTGTGC	9494	False	NA	-8	True	AATAAA	-17	NA	76062072	76055174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_76055200_76062100
Isoform_57072_35	chr15	-	176	1	Intergenic	novelGene_3964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAGTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	76107663	76107487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76107500_76107700
Isoform_57073_92	chr15	-	180	1	Intergenic	novelGene_3767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGGAAGACTGC	8788	False	NA	NA	False	NA	NA	NA	8634439	8634259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_8634300_8634400
Isoform_57074_110	chr15	+	165	1	Intergenic	novelGene_3965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGGGCAGCTC	NA	False	NA	NA	False	NA	NA	NA	76111538	76111703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76111500_76111700
Isoform_57075_8	chr15	+	177	1	Intergenic	novelGene_3966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATGTTCCCTTA	NA	False	NA	NA	False	NA	NA	NA	76162525	76162702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76162500_76162700
Isoform_57076_81	chr15	-	183	1	Intergenic	novelGene_3967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATTTTAAAAAAAACCAA	9516	False	NA	NA	False	NA	NA	NA	76199575	76199392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76199400_76199600
Isoform_57077_24	chr15	-	177	1	Intergenic	novelGene_3968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGTAAATCTTGAAAAAA	8593	False	NA	NA	False	NA	NA	NA	76200498	76200321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76200300_76200500
Isoform_57080_6	chr15	-	2912	1	Antisense	novelGene_ENSMUSG00000034259.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76215363	76212451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_76212500_76215400
Isoform_57084_10	chr15	-	210	1	Intergenic	novelGene_3969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAAGTGAGAC	NA	False	NA	NA	False	NA	NA	NA	76250793	76250583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76250600_76250800
Isoform_57086_20	chr15	-	169	1	Intergenic	novelGene_3970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4935	False	NA	NA	False	NA	NA	NA	76268963	76268794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76268800_76269000
Isoform_57087_7	chr15	-	173	1	Intergenic	novelGene_3749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTCCCTGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	4465201	4465028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_4465000_4465200
Isoform_57091_11	chr15	+	3169	1	FSM	ENSMUSG00000022556.12	ENSMUST00000228388.2	3133	1	-35	-1	-8	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAAAG	7113	False	NA	NA	False	GGGGCT	-36	NA	76361613	76364782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76361600_76364800
Isoform_57093_76	chr15	+	177	1	Antisense	novelGene_ENSMUSG00000022559.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAACCTTTAT	NA	False	NA	NA	False	NA	NA	NA	76419748	76419925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_76419700_76419900
Isoform_57095_67	chr15	+	171	1	Intergenic	novelGene_3971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	76451603	76451774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76451600_76451800
Isoform_57096_29	chr15	-	176	1	Antisense	novelGene_ENSMUSG00000116238.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGCAGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	76462422	76462246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_76462200_76462400
Isoform_57098_3	chr15	+	4457	1	Antisense	novelGene_ENSMUSG00000103047.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8683259	8687716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_8683300_8687700
Isoform_57101_3	chr15	+	177	1	Intergenic	novelGene_3972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACAAGACAAAACT	8778	False	NA	NA	False	NA	NA	NA	76547825	76548002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76547800_76548000
Isoform_57102_24	chr15	-	172	1	Intergenic	novelGene_3973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	76550068	76549896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76549900_76550100
Isoform_57109_142	chr15	+	186	1	Intergenic	novelGene_3974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76592079	76592265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76592100_76592300
Isoform_57111_5	chr15	-	3087	1	Genic_Genomic	ENSMUSG00000033707.10	novel	NA	NA	NA	NA	3077	3023	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAAGAAAAGAGAAG	8041	False	NA	NA	False	NA	NA	NA	76599539	76596452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_-_76596500_76599500
Isoform_57115_5	chr15	+	2708	1	Intergenic	novelGene_3975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACCGGAATAGAAGCA	145	False	NA	NA	False	NA	NA	NA	76690742	76693450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76690700_76693400
Isoform_57116_10	chr15	+	3065	1	Intergenic	novelGene_3976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	2538	False	NA	NA	False	AATAAA	-44	NA	76693786	76696851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76693800_76696900
Isoform_57118_5	chr15	-	176	1	Intergenic	novelGene_3977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAAG	823	False	NA	NA	False	NA	NA	NA	76723010	76722834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76722800_76723000
Isoform_57121_4	chr15	+	1331	1	FSM	ENSMUSG00000055041.9	ENSMUST00000230815.2	1331	1	6	-6	6	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTTATTCTATTAG	NA	False	NA	NA	False	ATTAAA	-19	NA	76784170	76785501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_76784200_76785500
Isoform_57126_15	chr15	+	191	1	Intergenic	novelGene_3978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGTTCTTATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76792571	76792762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76792600_76792800
Isoform_57127_3	chr15	-	176	1	Intergenic	novelGene_3979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAAAATACCCAACG	NA	False	NA	NA	False	NA	NA	NA	76793608	76793432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76793400_76793600
Isoform_57128_53	chr15	+	179	1	Intergenic	novelGene_3980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTCAG	NA	False	NA	NA	False	NA	NA	NA	76804332	76804511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76804300_76804500
Isoform_57129_64	chr15	+	172	1	Intergenic	novelGene_3981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGAGTTATTCC	NA	False	NA	NA	False	NA	NA	NA	76810226	76810398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76810200_76810400
Isoform_57131_7	chr15	+	171	1	Intergenic	novelGene_3982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	76814356	76814527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76814400_76814500
Isoform_57133_144	chr1	-	177	1	Intergenic	novelGene_354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	127773910	127773733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_127773700_127773900
Isoform_57136_17	chr15	-	178	1	Intergenic	novelGene_3984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	76873956	76873778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_76873800_76874000
Isoform_57137_6	chr15	+	171	1	Intergenic	novelGene_3985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAGTCTCAA	4977	False	NA	NA	False	NA	NA	NA	76910850	76911021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_76910800_76911000
Isoform_5714_3	chr10	+	6266	5	ISM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	22	1460	22	-1051	intron_retention	FALSE	canonical	3	174	junction_4	7.08431365765238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTGTGTATCTCAG	NA	False	NA	NA	False	NA	NA	NA	20223537	20235590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775
Isoform_5715_45	chr10	+	2304	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	56	-369	7	369	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGCCAATCTCAGTAC	NA	False	NA	35	True	AATAAA	-36	NA	20223571	20237419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
Isoform_57153_7	chr15	+	187	1	Intergenic	novelGene_3986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATATTTAAGC	NA	False	NA	NA	False	NA	NA	NA	77116850	77117037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_77116800_77117000
Isoform_57154_3	chr15	+	2185	1	Antisense	novelGene_ENSMUSG00000033565.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77190882	77193067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_77190900_77193100
Isoform_57155_3	chr15	-	172	1	Intergenic	novelGene_3987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAATCCAGA	5922	False	NA	NA	False	NA	NA	NA	77197847	77197675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_77197700_77197800
Isoform_57156_37	chr15	+	172	1	Intergenic	novelGene_3988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77219327	77219499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_77219300_77219500
Isoform_57158_26	chr15	+	169	1	Intergenic	novelGene_3989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGAAGCAAATAT	NA	False	NA	NA	False	NA	NA	NA	77225177	77225346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_77225200_77225300
Isoform_57159_33	chr15	-	178	1	Intergenic	novelGene_3990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACGA	NA	False	NA	NA	False	NA	NA	NA	77231170	77230992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_77231000_77231200
Isoform_57161_3	chr15	-	190	1	Intergenic	novelGene_3991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAGAAAGCAAGCTTGT	5815	False	NA	NA	False	NA	NA	NA	77251855	77251665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_77251700_77251900
Isoform_57162_140	chr15	-	180	1	Intergenic	novelGene_3992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAGTGTTCTTTTA	3596	False	NA	NA	False	NA	NA	NA	77254074	77253894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_77253900_77254100
Isoform_57163_4	chr15	-	154	1	Intergenic	novelGene_3993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACAATGAATAAGTAAAT	726	False	NA	NA	False	NA	NA	NA	77366419	77366265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_77366300_77366400
Isoform_5717_62	chr10	+	1961	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	56	-26	7	26	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCTTACTGTTTTAT	NA	False	NA	33	True	AATAAA	-40	NA	20223571	20237076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
Isoform_57172_415	chr11	-	183	1	Intergenic	novelGene_2028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAGTAACT	NA	False	NA	NA	False	NA	NA	NA	95780796	95780613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_95780600_95780800
Isoform_57175_97	chr17	-	176	1	Intergenic	novelGene_4782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGGGGGGGCA	NA	False	NA	NA	False	NA	NA	NA	26389630	26389454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26389500_26389600
Isoform_57177_8	chr15	+	166	1	Intergenic	novelGene_3995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTAATAATAATAATAG	NA	False	NA	NA	False	NA	NA	NA	77728749	77728915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_77728700_77728900
Isoform_57178_4	chr15	-	205	1	Intergenic	novelGene_3996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGGTTAAACG	NA	False	NA	NA	False	NA	NA	NA	77730314	77730109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_77730100_77730300
Isoform_5718_4	chr10	+	4924	6	NIC	ENSMUSG00000019992.9	novel	1991	7	NA	NA	6	-1	intron_retention	FALSE	canonical	3	160	junction_5	11.0887330205033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGTTGAGTATTTAACA	NA	False	NA	6	True	AATAAA	-13	NA	20223570	20237049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20233513_20236280
Isoform_57183_8	chr15	+	196	1	Intergenic	novelGene_3998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77769970	77770166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_77770000_77770200
Isoform_57185_31	chr15	+	180	1	Intergenic	novelGene_3999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77793994	77794174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_77794000_77794200
Isoform_57188_254	chr11	+	176	1	Intergenic	novelGene_2008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	263	False	NA	NA	False	NA	NA	NA	94946080	94946256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_94946100_94946300
Isoform_5719_3	chr10	+	1829	6	NIC	ENSMUSG00000019992.9	novel	1991	7	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	66.3849380507356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGTTGAGTATTTAACA	NA	False	NA	6	True	AATAAA	-13	NA	20223571	20237049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_20223670_20224080_20224182_20229112_20229226_20229775_20230012_20233000_20233513_20236280
Isoform_57192_6	chr15	-	188	1	Intergenic	novelGene_4000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATTAACAAGCTCTAAG	NA	False	NA	NA	False	NA	NA	NA	78260720	78260532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78260500_78260700
Isoform_57193_3	chr15	+	759	1	NIC	ENSMUSG00000071711.13	novel	1279	3	NA	NA	57	221	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCACTCTAAGCATCTCG	NA	False	NA	NA	False	NA	NA	NA	78294238	78294997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_78294200_78295000
Isoform_57194_18	chr15	-	161	1	Intergenic	novelGene_4001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2445	False	NA	NA	False	NA	NA	NA	78393461	78393300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78393300_78393500
Isoform_57195_34	chr15	-	1810	1	FSM	ENSMUSG00000068226.4	ENSMUST00000180449.2	441	1	-284	-1085	-284	1085	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTTTAATGGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	78439332	78437522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_78437500_78439300
Isoform_57197_29	chr5	+	188	1	Intergenic	novelGene_9122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGCTGGGAC	3562	False	NA	NA	False	NA	NA	NA	144682772	144682960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_144682800_144683000
Isoform_57198_3	chr15	+	178	1	Intergenic	novelGene_4002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAAACAA	9332	False	NA	NA	False	NA	NA	NA	78696525	78696703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_78696500_78696700
Isoform_57199_7	chr15	-	223	1	Intergenic	novelGene_4003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAAACTAATGACATTA	4886	False	NA	NA	False	AATAAA	-3	NA	78705914	78705691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78705700_78705900
Isoform_57201_6	chr15	+	2662	1	Genic_Genomic	ENSMUSG00000049521.3	novel	NA	NA	NA	NA	-7	-5619	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78726816	78729478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_+_78726800_78729500
Isoform_57202_5	chr15	+	177	1	Intergenic	novelGene_4004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTCTACTTCA	NA	False	NA	NA	False	NA	NA	NA	78751497	78751674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_78751500_78751700
Isoform_57203_11	chr15	-	181	1	Intergenic	novelGene_4005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAGGTTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	78755145	78754964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78755000_78755100
Isoform_57206_5	chr15	-	1378	1	Intergenic	novelGene_4006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	78783800	78782422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78782400_78783800
Isoform_57207_350	chr15	-	178	1	Intergenic	novelGene_4007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAACAAAAT	7094	False	NA	NA	False	NA	NA	NA	78848624	78848446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78848400_78848600
Isoform_57208_6	chr15	-	175	1	Intergenic	novelGene_4008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGTATCATGCT	NA	False	NA	NA	False	NA	NA	NA	78905641	78905466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78905500_78905600
Isoform_57209_856	chr15	+	2043	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	2	10	2	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	856	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAAAAATCTGAGTGGT	1149	False	NA	11	True	AATAAA	-7	NA	78912651	78914694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_78912700_78914700
Isoform_57216_5	chr15	-	179	1	Intergenic	novelGene_3769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGCATATCAGGAAG	NA	False	NA	NA	False	NA	NA	NA	8872329	8872150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_8872200_8872300
Isoform_57217_7	chr15	-	184	1	Intergenic	novelGene_4009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTAGCCTCTTGGGAGG	8718	False	NA	NA	False	NA	NA	NA	78916272	78916088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78916100_78916300
Isoform_57219_4	chr15	-	358	1	Intergenic	novelGene_4010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAATGGCCAGGG	1059	False	NA	NA	False	NA	NA	NA	78928682	78928324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78928300_78928700
Isoform_57220_8	chr10	+	173	1	Intergenic	novelGene_705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1594	False	NA	NA	False	NA	NA	NA	3790971	3791144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_3791000_3791100
Isoform_57221_4	chr15	-	319	1	Intergenic	novelGene_4011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCCAGGCTTC	NA	False	NA	NA	False	NA	NA	NA	78955816	78955497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_78955500_78955800
Isoform_57229_14	chr15	-	173	1	Intergenic	novelGene_4012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAAAGAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	79073245	79073072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_79073100_79073200
Isoform_5723_20	chr10	+	3593	18	ISM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	84	61745	6	-51784	5prime_fragment	FALSE	canonical	3	12	junction_5	6.24859845877153	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGACCACTAATTATT	NA	False	NA	NA	False	AATAAA	-15	NA	20828529	20894583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811
Isoform_57233_40	chr15	-	915	1	Antisense	novelGene_ENSMUSG00000042622.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGCTTCTATCTCAGA	NA	False	NA	1	True	AGTAAA	-22	NA	79241995	79241080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_79241100_79242000
Isoform_57234_6	chr15	-	3762	1	Antisense	novelGene_ENSMUSG00000022253.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAAAGGATATCAGTCAA	NA	False	NA	NA	False	NA	NA	NA	9076997	9073235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_9073200_9077000
Isoform_57239_3	chr15	+	1175	1	ISM	ENSMUSG00000085802.3	ENSMUST00000135583.3	3778	2	378	2857	378	-2857	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAAAAAAACATGC	NA	False	NA	NA	False	NA	NA	NA	79311797	79312972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_79311800_79313000
Isoform_5724_22	chr10	+	4767	24	FSM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	84	0	6	0	multi-exon	FALSE	canonical	3	12	junction_5	6.91700734047638	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGGTTTCTTTCTTTT	NA	False	NA	16	True	AATAAA	-21	NA	20828529	20956328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811_20893933_20917084_20917141_20930879_20931043_20934051_20934150_20948441_20948501_20950273_20950377_20954982
Isoform_57240_24	chr15	+	166	1	Intergenic	novelGene_4014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAGATTGGAA	253	False	NA	NA	False	NA	NA	NA	79347890	79348056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79347900_79348100
Isoform_57241_3	chr15	-	154	1	Intergenic	novelGene_4015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTG	NA	False	NA	NA	False	NA	NA	NA	79360512	79360358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_79360400_79360500
Isoform_57242_6	chr15	+	2179	1	NIC	ENSMUSG00000010830.9	novel	1411	5	NA	NA	20	-9130	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAGACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79400631	79402810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_79400600_79402800
Isoform_57243_6	chr15	-	686	1	Intergenic	novelGene_4016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	8403	False	NA	NA	False	NA	NA	NA	79406332	79405646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_79405600_79406300
Isoform_57244_6	chr15	-	1384	1	Genic_Genomic	ENSMUSG00000055065.8	novel	NA	NA	NA	NA	17472	36	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTGTACTCTTAATG	1451	False	NA	-4	True	AATAAA	-37	NA	79413284	79411900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_-_79411900_79413300
Isoform_5726_101	chr10	+	2638	5	FSM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	-24	11	-4	-8	multi-exon	FALSE	canonical	3	88	junction_4	452.231688407613	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAGTATGTTTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	21171912	21187097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997
Isoform_57271_82	chr15	+	176	1	Intergenic	novelGene_4017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	79480202	79480378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79480200_79480400
Isoform_57272_4	chr15	-	1080	1	Genic_Genomic	ENSMUSG00000022429.12	novel	NA	NA	NA	NA	-22	-41669	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	79489332	79488252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_-_79488300_79489300
Isoform_57273_13	chr15	+	181	1	Intergenic	novelGene_4018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAATTAA	NA	False	NA	NA	False	NA	NA	NA	79491105	79491286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79491100_79491300
Isoform_57274_123	chr15	+	175	1	Intergenic	novelGene_4019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79498158	79498333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79498200_79498300
Isoform_57275_3	chr15	+	186	1	Intergenic	novelGene_4020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTCTGGTCCAAC	NA	False	NA	NA	False	AATAAA	-16	NA	79501546	79501732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79501500_79501700
Isoform_57276_13	chr15	+	169	1	Intergenic	novelGene_4021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAAAATGACTTCGC	1386	False	NA	NA	False	NA	NA	NA	79529127	79529296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79529100_79529300
Isoform_5729_41	chr10	+	2974	19	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	306.115592828656	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCAAAAATGTGTTTTA	NA	False	NA	16	True	AATAAA	-18	NA	21171910	21244786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
Isoform_57292_4	chr15	-	180	1	Intergenic	novelGene_4023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTACAAACAAAACAAAACAA	9693	False	NA	NA	False	NA	NA	NA	79726283	79726103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_79726100_79726300
Isoform_57293_27	chr15	+	185	1	Intergenic	novelGene_4024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	79727076	79727261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79727100_79727300
Isoform_57294_6	chr15	+	168	1	Intergenic	novelGene_4025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	3239	False	NA	NA	False	NA	NA	NA	79742874	79743042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79742900_79743000
Isoform_57295_3	chr15	-	159	1	Intergenic	novelGene_4026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	2866	False	NA	NA	False	NA	NA	NA	79771575	79771416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_79771400_79771600
Isoform_57296_7	chr15	-	164	1	Intergenic	novelGene_4027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	8287	False	NA	NA	False	NA	NA	NA	79778594	79778430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_79778400_79778600
Isoform_57318_25	chr15	+	173	1	Intergenic	novelGene_4028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCATGT	NA	False	NA	NA	False	NA	NA	NA	79807120	79807293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79807100_79807300
Isoform_57320_26	chr15	+	3921	1	Intergenic	novelGene_4029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACTTACTTGGTAGGCA	NA	False	NA	NA	False	NA	NA	NA	79810493	79814414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_79810500_79814400
Isoform_57323_15	chr15	-	5184	1	Genic_Genomic	ENSMUSG00000053411.17	novel	NA	NA	NA	NA	-9	-35397	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTCTTGAAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79855329	79850145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_-_79850100_79855300
Isoform_57326_4	chr15	-	181	1	Intergenic	novelGene_4030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTTAAAAAAAAAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	79874152	79873971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_79874000_79874200
Isoform_57329_59	chr15	-	4289	1	FSM	ENSMUSG00000105167.4	ENSMUST00000199549.4	108	1	-398	-3783	-398	3783	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	3572	False	NA	NA	False	NA	NA	NA	79967553	79963264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_79963300_79967600
Isoform_57335_26	chr15	+	179	1	Intergenic	novelGene_4032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGAAGGTGG	NA	False	NA	NA	False	NA	NA	NA	80006429	80006608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_80006400_80006600
Isoform_57339_9	chr15	-	175	1	Intergenic	novelGene_4034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80036160	80035985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_80036000_80036200
Isoform_57340_4	chr15	-	609	1	Intergenic	novelGene_4033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80036592	80035983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_80036000_80036600
Isoform_57341_10	chr15	-	176	1	Intergenic	novelGene_4035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80053201	80053025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_80053000_80053200
Isoform_57342_88	chr15	-	176	1	Intergenic	novelGene_4036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTACTTGAT	NA	False	NA	NA	False	NA	NA	NA	80062916	80062740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_80062700_80062900
Isoform_57343_15	chr15	+	173	1	Intergenic	novelGene_4037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATACAATAGT	NA	False	NA	NA	False	NA	NA	NA	80081214	80081387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_80081200_80081400
Isoform_57344_6	chr15	-	210	1	Intergenic	novelGene_4038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAGCTCCAGA	9373	False	NA	NA	False	NA	NA	NA	80089557	80089347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_80089300_80089600
Isoform_57346_15	chr15	+	171	1	Intergenic	novelGene_4039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	3799	False	NA	NA	False	NA	NA	NA	80114264	80114435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_80114300_80114400
Isoform_57347_3	chr15	-	162	1	Intergenic	novelGene_4040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	80116295	80116133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_80116100_80116300
Isoform_5737_2365	chr10	+	2752	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-18	-1	-3	1	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTGCAAAAATGTGTT	NA	False	NA	13	True	AATAAA	-15	NA	21171913	21244783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
Isoform_57373_39	chr19	-	176	1	Intergenic	novelGene_5879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46560171	46559995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46560000_46560200
Isoform_57375_43	chr15	+	195	1	Intergenic	novelGene_4041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGTCTGGAGAGAATT	9825	False	NA	NA	False	NA	NA	NA	80588204	80588399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_80588200_80588400
Isoform_57376_12	chr15	-	170	1	Intergenic	novelGene_3770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9191574	9191404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_9191400_9191600
Isoform_57378_3	chr15	+	177	1	Intergenic	novelGene_4042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACAC	NA	False	NA	NA	False	NA	NA	NA	80666878	80667055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_80666900_80667100
Isoform_57379_30	chr15	-	175	1	Intergenic	novelGene_4043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	80716112	80715937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_80715900_80716100
Isoform_57381_10	chr15	+	195	1	Intergenic	novelGene_4044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAACCTAGGAA	NA	False	NA	NA	False	NA	NA	NA	80754626	80754821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_80754600_80754800
Isoform_57382_4	chr15	+	3295	1	FSM	ENSMUSG00000092868.3	ENSMUST00000175127.3	82	1	-2248	-965	-2248	965	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTTGTCATTTCTG	1563	False	NA	7	True	AATAAA	-19	NA	80821991	80825286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_80822000_80825300
Isoform_57384_38	chr15	-	171	1	Intergenic	novelGene_4045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAGTGCTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	80872424	80872253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_80872300_80872400
Isoform_57387_10	chr15	+	173	1	Intergenic	novelGene_4047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATATCTTCGA	NA	False	NA	NA	False	NA	NA	NA	80886527	80886700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_80886500_80886700
Isoform_57393_22	chr15	-	168	1	Intergenic	novelGene_4048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTTAAAAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	80994245	80994077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_80994100_80994200
Isoform_57394_4	chr15	+	177	1	Intergenic	novelGene_4049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGAGATTGG	NA	False	NA	NA	False	NA	NA	NA	81019460	81019637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81019500_81019600
Isoform_57395_30	chr15	+	171	1	Intergenic	novelGene_4050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	81056170	81056341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81056200_81056300
Isoform_57398_10	chr15	-	154	1	Intergenic	novelGene_4051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	81078722	81078568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81078600_81078700
Isoform_57399_23	chr15	-	6993	2	Intergenic	novelGene_3772	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	9226274	9219243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_9220283_9220320
Isoform_57400_3	chr2	+	2910	1	Intergenic	novelGene_6218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	50880815	50883725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_50880800_50883700
Isoform_57402_3	chr15	+	202	1	Intergenic	novelGene_4052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAACTAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	81159339	81159541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81159300_81159500
Isoform_57404_13	chr15	-	164	1	Intergenic	novelGene_4053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	81200264	81200100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81200100_81200300
Isoform_57406_9	chr15	+	175	1	Intergenic	novelGene_4054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTAACCTCTG	NA	False	NA	NA	False	NA	NA	NA	81210741	81210916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81210700_81210900
Isoform_57407_43	chr15	-	2328	1	Intergenic	novelGene_3773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCGTCTTGGCTACATT	9	False	NA	1	True	NA	NA	NA	9357161	9354833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_9354800_9357200
Isoform_5741_56	chr10	+	2807	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_17	229.173164005618	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTTATTTCTTA	NA	False	NA	23	True	AATAAA	-25	NA	21171913	21244793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243731_21244187
Isoform_57419_3	chr15	+	3092	1	NIC	ENSMUSG00000022401.13	novel	6058	10	NA	NA	-4	-13855	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	81284366	81287458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_81284400_81287500
Isoform_57420_20	chr15	+	178	1	Intergenic	novelGene_4055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	81287281	81287459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81287300_81287500
Isoform_57421_23	chr15	+	180	1	Intergenic	novelGene_4056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAATTGTTCAAGA	243	False	NA	NA	False	NA	NA	NA	81302040	81302220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81302000_81302200
Isoform_57422_29	chr15	-	177	1	Intergenic	novelGene_4057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGTGCAGTA	NA	False	NA	NA	False	NA	NA	NA	81330930	81330753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81330800_81330900
Isoform_57423_4	chr15	+	216	1	Intergenic	novelGene_4058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGGAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	81343614	81343830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81343600_81343800
Isoform_57425_3	chr15	-	169	1	Intergenic	novelGene_4059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGAATTTATATAT	3228	False	NA	NA	False	NA	NA	NA	81362119	81361950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81362000_81362100
Isoform_57426_174	chr15	-	172	1	Intergenic	novelGene_4060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAAACAA	7232	False	NA	NA	False	NA	NA	NA	81367652	81367480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81367500_81367700
Isoform_57427_6	chr15	-	156	1	Intergenic	novelGene_4061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAACACTTGGCTC	4732	False	NA	NA	False	NA	NA	NA	81370152	81369996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81370000_81370200
Isoform_57431_6	chr15	+	176	1	Intergenic	novelGene_4062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCCCCATTA	NA	False	NA	NA	False	NA	NA	NA	81430206	81430382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81430200_81430400
Isoform_57432_944	chr15	-	175	1	Intergenic	novelGene_4063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	944	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTACTTTTTAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	81437619	81437444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81437400_81437600
Isoform_57434_3	chr15	-	2310	1	FSM	ENSMUSG00000103520.2	ENSMUST00000192082.2	855	1	-1454	-1	-1454	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTACCTTGTGTGTCTCT	NA	False	NA	NA	False	AATAAA	-28	NA	81470683	81468373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81468400_81470700
Isoform_57435_5	chr15	+	2449	1	FSM	ENSMUSG00000055024.13	ENSMUST00000185375.3	2997	1	-32	580	-32	-580	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAGAAGAAAAAGAAG	2831	False	NA	NA	False	NA	NA	NA	81469519	81471968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81469500_81472000
Isoform_57443_46	chr15	-	175	1	Intergenic	novelGene_4064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTATTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	81544103	81543928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81543900_81544100
Isoform_57444_20	chr15	+	178	1	Intergenic	novelGene_4065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCATTTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	81544839	81545017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81544800_81545000
Isoform_57445_159	chr15	-	176	1	Intergenic	novelGene_4066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81551105	81550929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81550900_81551100
Isoform_57446_16	chr15	-	178	1	Intergenic	novelGene_4067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81555077	81554899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81554900_81555100
Isoform_57447_15	chr15	+	178	1	Intergenic	novelGene_3774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	9899884	9900062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_9899900_9900100
Isoform_57455_8	chr15	+	1060	1	Antisense	novelGene_ENSMUSG00000022391.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCTAAAAAAAAAAA	1003	False	NA	NA	False	NA	NA	NA	81589957	81591017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_81590000_81591000
Isoform_57463_5	chr15	-	174	1	Intergenic	novelGene_4069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	81655366	81655192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81655200_81655400
Isoform_57465_3	chr15	+	176	1	Intergenic	novelGene_4070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	81674005	81674181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81674000_81674200
Isoform_57469_5	chr15	-	2541	1	FSM	ENSMUSG00000048546.9	ENSMUST00000229500.2	2590	1	50	-1	50	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	81742474	81739933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_81739900_81742500
Isoform_57472_7	chr15	-	255	1	Intergenic	novelGene_4071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTGCAACTACACCC	NA	False	NA	NA	False	NA	NA	NA	81771510	81771255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81771300_81771500
Isoform_57474_6	chr15	-	200	1	Intergenic	novelGene_4072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGCTTCAGACTCATG	NA	False	NA	NA	False	NA	NA	NA	81778052	81777852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81777900_81778100
Isoform_57475_4	chr15	-	896	1	Antisense	novelGene_ENSMUSG00000022477.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-11	NA	81780017	81779121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_81779100_81780000
Isoform_57480_14	chr15	+	186	1	Intergenic	novelGene_4073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAGATTTAAA	6597	False	NA	NA	False	NA	NA	NA	81842490	81842676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81842500_81842700
Isoform_57483_5	chr15	+	309	1	Intergenic	novelGene_4074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	81849644	81849953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81849600_81850000
Isoform_57484_3	chr15	+	224	1	FSM	ENSMUSG00000061848.6	ENSMUST00000072779.6	456	1	298	-66	298	66	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAATGATGGTATGT	6572	False	NA	NA	False	AATAAA	-36	NA	81856888	81857112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81856900_81857100
Isoform_57486_98	chr15	+	1019	1	FSM	ENSMUSG00000061633.4	ENSMUST00000074608.4	1024	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAGTGCATTCTTAAA	6331	False	NA	9	True	AATAAA	-17	NA	81864745	81865764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_81864700_81865800
Isoform_57487_6	chr15	-	170	1	Intergenic	novelGene_4075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	5569	False	NA	NA	False	NA	NA	NA	81866330	81866160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81866200_81866300
Isoform_57491_3	chr15	-	585	1	Antisense	novelGene_ENSMUSG00000022471.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAGAAAGACAAAAAAAA	6697	False	NA	NA	False	NA	NA	NA	81913306	81912721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_81912700_81913300
Isoform_57498_8	chr15	+	176	1	Intergenic	novelGene_4076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	81962485	81962661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_81962500_81962700
Isoform_57499_9	chr15	-	170	1	Intergenic	novelGene_4077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGTATGAAACA	6386	False	NA	NA	False	NA	NA	NA	81962956	81962786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_81962800_81963000
Isoform_57500_37	chr15	-	209	1	Intergenic	novelGene_4078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCAGAATGAGGGAGTT	NA	False	NA	NA	False	NA	NA	NA	82002535	82002326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_82002300_82002500
Isoform_57503_87	chr6	-	183	1	Intergenic	novelGene_9399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATAGCTC	NA	False	NA	NA	False	NA	NA	NA	67132149	67131966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_67132000_67132100
Isoform_5751_90	chr10	+	2748	18	FSM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	36	9	-3	6	multi-exon	FALSE	canonical	3	89	junction_4	231.196571495514	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAAATGTGTTTTATT	NA	False	NA	18	True	AATAAA	-20	NA	21171913	21244788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
Isoform_57519_3	chr15	-	233	1	Intergenic	novelGene_4080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCCCAGGACTCTGCTG	NA	False	NA	NA	False	NA	NA	NA	82102782	82102549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_82102500_82102800
Isoform_57520_25	chr15	-	175	1	Intergenic	novelGene_4081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCCTCTGTGGACTGT	NA	False	NA	NA	False	NA	NA	NA	82102782	82102607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_82102600_82102800
Isoform_57521_10	chr15	+	855	1	Intergenic	novelGene_3775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10482021	10482876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_10482000_10482900
Isoform_57525_15	chr15	-	173	1	Intergenic	novelGene_4082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAATCTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	82129366	82129193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_82129200_82129400
Isoform_57534_200	chr15	-	177	1	Intergenic	novelGene_4083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATAGTGTCC	NA	False	NA	NA	False	NA	NA	NA	82474619	82474442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_82474400_82474600
Isoform_57538_13	chr15	+	268	1	Intergenic	novelGene_4085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCGTATTACTTCAAC	NA	False	NA	NA	False	NA	NA	NA	82755827	82756095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_82755800_82756100
Isoform_57540_76	chr15	+	186	1	Intergenic	novelGene_4086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	82763265	82763451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_82763300_82763500
Isoform_57541_723	chr15	+	174	1	Intergenic	novelGene_4087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	723	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	874	False	NA	NA	False	NA	NA	NA	82899945	82900119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_82899900_82900100
Isoform_57542_5	chr15	+	177	1	Intergenic	novelGene_4088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTGT	NA	False	NA	NA	False	NA	NA	NA	82957194	82957371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_82957200_82957400
Isoform_57543_19	chr15	-	176	1	Intergenic	novelGene_4089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	6807	False	NA	NA	False	NA	NA	NA	82981076	82980900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_82980900_82981100
Isoform_57560_6	chr15	+	176	1	Intergenic	novelGene_4090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTACACAAAGCTTCTC	7988	False	NA	NA	False	NA	NA	NA	83043481	83043657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_83043500_83043700
Isoform_57562_12	chr15	+	2444	1	FSM	ENSMUSG00000116508.2	ENSMUST00000231106.2	2459	1	7	8	7	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACGCAAGCCACCTGA	NA	False	NA	NA	False	AATAAA	-10	NA	83056557	83059001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_83056600_83059000
Isoform_57569_9	chr15	+	272	1	Intergenic	novelGene_4091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTCCATGGACACCAGG	NA	False	NA	NA	False	NA	NA	NA	83133363	83133635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_83133400_83133600
Isoform_57570_3	chr15	+	4640	1	Antisense	novelGene_ENSMUSG00000022246.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10585603	10590243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_10585600_10590200
Isoform_57579_3	chr15	+	175	1	Intergenic	novelGene_4092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTATTTTGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	83308923	83309098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_83308900_83309100
Isoform_57580_4	chr15	+	181	1	Intergenic	novelGene_4093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCAGCTGGGATGCAG	NA	False	NA	NA	False	NA	NA	NA	83375839	83376020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_83375800_83376000
Isoform_57581_13	chr15	-	173	1	Intergenic	novelGene_3776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATAATAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	10604840	10604667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_10604700_10604800
Isoform_57583_31	chr15	-	183	1	Intergenic	novelGene_4094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAACCAAAAT	1788	False	NA	NA	False	NA	NA	NA	83472308	83472125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_83472100_83472300
Isoform_57584_15	chr15	-	179	1	Intergenic	novelGene_4095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	83520234	83520055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_83520100_83520200
Isoform_57585_11	chr15	-	177	1	Intergenic	novelGene_4096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGACTGTTTTACA	NA	False	NA	NA	False	NA	NA	NA	83897532	83897355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_83897400_83897500
Isoform_57587_4	chr15	+	2439	1	FSM	ENSMUSG00000098882.3	ENSMUST00000184924.3	108	1	-478	-1853	-478	1853	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84051992	84054431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_84052000_84054400
Isoform_57589_5	chr15	-	371	1	Intergenic	novelGene_4097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTGTATGACATTTA	NA	False	NA	NA	False	AATAAA	-22	NA	84076352	84075981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_84076000_84076400
Isoform_57590_16	chr15	-	180	1	Intergenic	novelGene_4098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTAGGAGAAAAAAATA	4446	False	NA	NA	False	NA	NA	NA	84127624	84127444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_84127400_84127600
Isoform_57591_6	chr15	-	150	1	Intergenic	novelGene_4099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATGAAACTTAA	4098	False	NA	NA	False	NA	NA	NA	84127972	84127822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_84127800_84128000
Isoform_57594_24	chr15	-	182	1	Intergenic	novelGene_4100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGGAAGATAGTACTC	9267	False	NA	NA	False	NA	NA	NA	84173799	84173617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_84173600_84173800
Isoform_57598_5	chr15	+	1196	1	Intergenic	novelGene_3777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACCAACCAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	10630389	10631585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_10630400_10631600
Isoform_57599_30	chr15	-	176	1	Intergenic	novelGene_4101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTCTAAAAAAGAA	NA	False	NA	0	True	NA	NA	NA	84413185	84413009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_84413000_84413200
Isoform_57602_19	chr15	-	4467	1	FSM	ENSMUSG00000055745.5	ENSMUST00000069476.5	4426	1	-41	0	-41	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCGTATCTGCTATA	4986	False	NA	-17	True	ATTAAA	-14	NA	84442065	84437598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_84437600_84442100
Isoform_57604_5	chr15	+	212	1	Intergenic	novelGene_4102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84519893	84520105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_84519900_84520100
Isoform_57606_10	chr15	+	175	1	Intergenic	novelGene_4103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAAATCTCCTGC	NA	False	NA	NA	False	NA	NA	NA	84781871	84782046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_84781900_84782000
Isoform_57608_11	chr15	+	169	1	Intergenic	novelGene_4104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCCAGATGTGAC	NA	False	NA	NA	False	NA	NA	NA	84793103	84793272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_84793100_84793300
Isoform_57609_90	chr15	-	179	1	ISM	ENSMUSG00000100967.2	ENSMUST00000189185.2	8038	2	2298	7124	2298	-7124	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	84801941	84801762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_84801800_84801900
Isoform_57616_34	chr15	-	175	1	Intergenic	novelGene_4105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	84866862	84866687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_84866700_84866900
Isoform_57617_28	chr15	+	174	1	Intergenic	novelGene_4106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATCT	NA	False	NA	NA	False	NA	NA	NA	84903065	84903239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_84903100_84903200
Isoform_57619_18	chr15	-	165	1	Intergenic	novelGene_4107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGAAAAAAAGAATGAGT	NA	False	NA	NA	False	NA	NA	NA	85088759	85088594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_85088600_85088800
Isoform_57628_9	chr15	-	178	1	Intergenic	novelGene_4108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGTACCAATATAT	NA	False	NA	NA	False	NA	NA	NA	85257783	85257605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_85257600_85257800
Isoform_57629_11	chr2	-	176	1	Intergenic	novelGene_6841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	173191082	173190906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_173190900_173191100
Isoform_57630_37	chr15	+	177	1	Intergenic	novelGene_4109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	85491272	85491449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_85491300_85491400
Isoform_57631_78	chr15	-	172	1	Intergenic	novelGene_4110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	85663136	85662964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_85663000_85663100
Isoform_57633_15	chr15	+	163	1	Intergenic	novelGene_4111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGATGGTTCTAGT	NA	False	NA	NA	False	NA	NA	NA	85771510	85771673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_85771500_85771700
Isoform_57640_68	chr15	-	208	1	Intergenic	novelGene_4112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	86078649	86078441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_86078400_86078600
Isoform_57642_29	chr15	-	171	1	Intergenic	novelGene_4113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGCTGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	86080492	86080321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_86080300_86080500
Isoform_57643_4	chr15	-	1716	1	Intergenic	novelGene_4114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86098599	86096883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_86096900_86098600
Isoform_57644_141	chr15	-	599	1	Intergenic	novelGene_4115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTTCTGTAGAATAT	NA	False	NA	-1	True	NA	NA	NA	86098574	86097975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_86098000_86098600
Isoform_57646_3	chr15	-	171	1	Intergenic	novelGene_4116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTTAAAAAGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	86408389	86408218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_86408200_86408400
Isoform_57647_3	chr15	+	177	1	Intergenic	novelGene_4117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTCCCTTTGCCACGT	NA	False	NA	NA	False	NA	NA	NA	86849455	86849632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_86849500_86849600
Isoform_57651_7	chr15	+	2761	1	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88571969	88574730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_88572000_88574700
Isoform_57652_36	chr15	+	2935	1	Intergenic	novelGene_4119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTGGCTGCTTTTC	NA	False	NA	21	True	NA	NA	NA	88592700	88595635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_88592700_88595600
Isoform_57653_26	chr15	+	2439	1	Intergenic	novelGene_4118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTCTGGCACAGAAAT	NA	False	NA	22	True	AATAAA	-34	NA	88592673	88595112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_88592700_88595100
Isoform_57655_5	chr15	+	4489	1	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAACCACACCTGAAAC	NA	False	NA	NA	False	AATAAA	-9	NA	88592673	88597162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_88592700_88597200
Isoform_57657_34	chr15	-	176	1	Intergenic	novelGene_4120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAAGCCGGT	NA	False	NA	NA	False	NA	NA	NA	88604790	88604614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_88604600_88604800
Isoform_57658_738	chr1	-	179	2	Intergenic	novelGene_557	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	738	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	167128315	166788265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_166788364_167128234
Isoform_57659_24	chr10	-	176	1	Intergenic	novelGene_846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACTATGTTT	NA	False	NA	NA	False	NA	NA	NA	53005299	53005123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_53005100_53005300
Isoform_57682_5	chr15	-	218	1	Intergenic	novelGene_4121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAATATACCTATAACCT	NA	False	NA	NA	False	AATGAA	-10	NA	88671077	88670859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_88670900_88671100
Isoform_57684_25	chr15	+	180	1	Intergenic	novelGene_4122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGGCACTTATAATA	NA	False	NA	NA	False	NA	NA	NA	88679920	88680100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_88679900_88680100
Isoform_57687_12	chr15	-	181	1	Intergenic	novelGene_4123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	88756901	88756720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_88756700_88756900
Isoform_5769_3	chr10	+	699	2	ISM	ENSMUSG00000050844.6	ENSMUST00000057341.6	1062	3	-29	28465	-29	-27854	5prime_fragment	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCTGGAGAACCCACT	NA	False	NA	NA	False	AATAAA	-16	NA	21469014	21469810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_21469134_21469230
Isoform_57695_155	chr15	-	177	1	Intergenic	novelGene_4124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAGAACCTAT	7735	False	NA	NA	False	NA	NA	NA	89129856	89129679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_89129700_89129900
Isoform_57696_6	chr15	+	2564	1	Genic_Genomic	ENSMUSG00000054136.7	novel	NA	NA	NA	NA	261	813	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAGAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	89207183	89209747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_+_89207200_89209700
Isoform_57697_48	chr15	-	167	1	Intergenic	novelGene_3778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTTTTAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11471887	11471720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_11471700_11471900
Isoform_57699_61	chr15	+	1946	1	NIC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	-11	-6183	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89239954	89241900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_89240000_89241900
Isoform_577_951	SIRV2	-	682	5	FSM	SIRV2A	SIRV203	686	5	1	3	1	-3	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAATTGACGTGGACGT	NA	False	NA	NA	False	NA	NA	NA	5894	3668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
Isoform_5770_8	chr10	+	1079	3	FSM	ENSMUSG00000050844.6	ENSMUST00000057341.6	1062	3	-17	0	-17	0	multi-exon	TRUE	canonical	3	7	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGGACTCTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	21469026	21498275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_21469134_21469230_21469472_21497544
Isoform_57701_5	chr15	-	175	1	Intergenic	novelGene_4125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATACATGTTCA	NA	False	NA	NA	False	NA	NA	NA	89242401	89242226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_89242200_89242400
Isoform_57708_6	chr15	-	165	1	Intergenic	novelGene_4126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	89299337	89299172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_89299200_89299300
Isoform_5771_564	chr10	+	2602	12	FSM	ENSMUSG00000019970.16	ENSMUST00000164659.8	2602	12	3	-3	3	-2	multi-exon	FALSE	canonical	3	251	junction_1	208.20654874943	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTCATGTGTTAACT	NA	False	NA	16	True	AATAAA	-22	NA	21854573	21875800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
Isoform_57711_14	chr15	+	183	1	FSM	ENSMUSG00000079242.3	ENSMUST00000168646.2	1280	1	904	193	904	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAAGCCTAGGGAGTG	NA	False	NA	NA	False	NA	NA	NA	89314695	89314878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_89314700_89314900
Isoform_57712_3	chr15	+	177	1	Intergenic	novelGene_4127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89318182	89318359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_89318200_89318400
Isoform_57715_3	chr15	-	176	1	Intergenic	novelGene_4128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAAGTAGAA	5881	False	NA	NA	False	NA	NA	NA	89410780	89410604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_89410600_89410800
Isoform_57716_11	chr15	-	177	1	Intergenic	novelGene_4129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGCTGAGCGTGGT	4166	False	NA	NA	False	NA	NA	NA	89425727	89425550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_89425600_89425700
Isoform_57717_3	chr15	+	169	1	Intergenic	novelGene_3779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACCACATCTGTCCC	NA	False	NA	NA	False	NA	NA	NA	11726852	11727021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_11726900_11727000
Isoform_57735_2300	chr15	-	436	1	FSM	ENSMUSG00000067870.6	ENSMUST00000181935.2	378	1	-24	-34	-24	34	mono-exon	FALSE	NA	NA	NA	NA	NA	2300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	90648883	90648447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_90648400_90648900
Isoform_57736_923	chr15	-	466	1	FSM	ENSMUSG00000067870.6	ENSMUST00000181935.2	378	1	-54	-34	-54	34	mono-exon	FALSE	NA	NA	NA	NA	NA	923	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	90648913	90648447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_90648400_90648900
Isoform_57739_16	chr15	+	638	1	FSM	ENSMUSG00000067869.5	ENSMUST00000117942.2	904	1	-102	368	-102	-368	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGGAATACAGACATGA	NA	False	NA	NA	False	NA	NA	NA	90766715	90767353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_90766700_90767400
Isoform_57742_21	chr15	-	223	1	Intergenic	novelGene_4130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGATCATACCCCTTGTT	NA	False	NA	NA	False	NA	NA	NA	92298012	92297789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_92297800_92298000
Isoform_57743_5	chr15	+	175	1	Intergenic	novelGene_4131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92836995	92837170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_92837000_92837200
Isoform_57744_4	chr15	-	221	1	Intergenic	novelGene_3780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATAAAACGGATGGGAAAG	NA	False	NA	NA	False	AAAAAG	-14	NA	11971892	11971671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_11971700_11971900
Isoform_57745_5	chr15	-	1770	1	Intergenic	novelGene_4132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACGAGAAAAAAAACACACT	NA	False	NA	NA	False	NA	NA	NA	93032023	93030253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_93030300_93032000
Isoform_57755_3	chr15	+	173	1	Intergenic	novelGene_4134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAAATTGTTAT	NA	False	NA	NA	False	NA	NA	NA	93166414	93166587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_93166400_93166600
Isoform_57756_10	chr15	-	191	1	Intergenic	novelGene_4135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGTTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	93310304	93310113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_93310100_93310300
Isoform_57758_5	chr15	+	176	1	Intergenic	novelGene_4136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAAGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	93378551	93378727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_93378600_93378700
Isoform_57763_16	chr15	-	325	1	Intergenic	novelGene_4137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	-32	True	AAAAAG	-30	NA	93576840	93576515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_93576500_93576800
Isoform_57764_5	chr15	-	178	1	Intergenic	novelGene_4138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAATAATTCTTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	94296506	94296328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_94296300_94296500
Isoform_5777_130	chr10	+	2477	12	FSM	ENSMUSG00000019970.16	ENSMUST00000100036.10	2476	12	0	-1	0	1	multi-exon	FALSE	canonical	3	40	junction_1	266.915376443206	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTGTCATGTGTTAA	NA	False	NA	14	True	AATAAA	-20	NA	21868121	21875798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_21868307_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
Isoform_57771_3	chr15	-	1289	1	Intergenic	novelGene_4139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGATGCCTAACAATAC	NA	False	NA	NA	False	NA	NA	NA	94650323	94649034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_94649000_94650300
Isoform_57772_4	chr15	-	2533	1	Intergenic	novelGene_4140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	94835635	94833102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_94833100_94835600
Isoform_57774_11	chr15	-	176	1	Intergenic	novelGene_4141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGAGAGGC	NA	False	NA	NA	False	NA	NA	NA	95665304	95665128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_95665100_95665300
Isoform_57776_10	chr15	+	197	1	Intergenic	novelGene_4142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGGAACCAAGGCAGGTC	NA	False	NA	NA	False	NA	NA	NA	95720342	95720539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_95720300_95720500
Isoform_57778_11	chr15	-	200	1	Intergenic	novelGene_4143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATCCAAGAATCCTGGGA	NA	False	NA	NA	False	NA	NA	NA	95911349	95911149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_95911100_95911300
Isoform_57779_3	chr15	-	174	1	Intergenic	novelGene_4144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCAGAGCGAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	96034336	96034162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_96034200_96034300
Isoform_57780_18	chr15	+	171	1	Intergenic	novelGene_4145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTTTTAAAAAAATCTAAA	7771	False	NA	NA	False	NA	NA	NA	96070986	96071157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_96071000_96071200
Isoform_57781_32	chr15	+	183	1	Intergenic	novelGene_4146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	96203674	96203857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_96203700_96203900
Isoform_57783_5	chr15	-	179	1	Intergenic	novelGene_4147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAATAACAT	NA	False	NA	NA	False	NA	NA	NA	96219212	96219033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_96219000_96219200
Isoform_57784_57	chr15	-	4386	2	Antisense	novelGene_ENSMUSG00000022201.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	3931	False	NA	NA	False	NA	NA	NA	12133999	12129593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_12131088_12131107
Isoform_57786_166	chr15	-	199	1	ISM	ENSMUSG00000033228.9	ENSMUST00000227133.2	2599	2	10577	285	-3651	-285	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	96348104	96347905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_96347900_96348100
Isoform_57787_29	chr15	+	175	1	Intergenic	novelGene_4148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGGCAACTGA	9794	False	NA	NA	False	NA	NA	NA	96352366	96352541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_96352400_96352500
Isoform_57788_211	chr15	-	182	1	Intergenic	novelGene_4149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAGAGAGATAA	NA	False	NA	NA	False	NA	NA	NA	96390973	96390791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_96390800_96391000
Isoform_578_223	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_1	198	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV2_-_3826_3966_4480_4687
Isoform_57814_3	chr15	+	3173	1	Antisense	novelGene_ENSMUSG00000023169.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAAACTTTCCCTTCGA	8134	False	NA	NA	False	NA	NA	NA	96483021	96486194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_96483000_96486200
Isoform_57816_12	chr15	+	176	1	Intergenic	novelGene_4150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	96525939	96526115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_96525900_96526100
Isoform_57817_14	chr15	-	3685	1	FSM	ENSMUSG00000023169.16	ENSMUST00000229253.2	3722	1	35	2	35	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-2	NA	96540245	96536560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_96536600_96540200
Isoform_57842_26	chr15	+	174	1	Intergenic	novelGene_4151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAACTAAGGTATTAA	NA	False	NA	NA	False	NA	NA	NA	96681398	96681572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_96681400_96681600
Isoform_57844_25	chr15	-	175	1	Intergenic	novelGene_4152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAATATTCAA	NA	False	NA	NA	False	NA	NA	NA	96821521	96821346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_96821300_96821500
Isoform_57847_6	chr15	-	171	1	Intergenic	novelGene_4153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAAAAAACAATAAATA	NA	False	NA	NA	False	NA	NA	NA	96863139	96862968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_96863000_96863100
Isoform_57865_37	chr15	+	237	1	Intergenic	novelGene_4154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAACAATATACAGGGAC	NA	False	NA	76	True	NA	NA	NA	97024529	97024766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_97024500_97024800
Isoform_57870_3	chr15	-	3174	1	FSM	ENSMUSG00000048218.7	ENSMUST00000229890.2	2998	1	-179	3	-14	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTATGCTTGAGTTGC	NA	False	NA	NA	False	AATACA	-14	NA	97145182	97142008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_97142000_97145200
Isoform_5788_4527	chr10	+	2437	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	17	2	0	-2	multi-exon	FALSE	canonical	3	717	junction_1	88.4218850289119	4527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTCATGTGTTAACT	NA	False	NA	16	True	AATAAA	-22	NA	21870581	21875800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
Isoform_57881_72	chr15	+	181	1	Intergenic	novelGene_4155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97301290	97301471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_97301300_97301500
Isoform_57882_4	chr15	-	227	1	Intergenic	novelGene_4156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTATTTTTACTTCTCC	NA	False	NA	NA	False	AATACA	-22	NA	97303494	97303267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_97303300_97303500
Isoform_57889_3	chr15	+	209	1	Intergenic	novelGene_4157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTCTGAAGTCCAACG	NA	False	NA	NA	False	NA	NA	NA	97417629	97417838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_97417600_97417800
Isoform_57891_20	chr15	-	178	1	Intergenic	novelGene_4158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTGCC	NA	False	NA	NA	False	NA	NA	NA	97424892	97424714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_97424700_97424900
Isoform_57892_4	chr15	+	162	1	Intergenic	novelGene_4159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGGGATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	97443514	97443676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_97443500_97443700
Isoform_57893_8	chr15	-	167	1	Intergenic	novelGene_4160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	97552151	97551984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_97552000_97552200
Isoform_57895_3	chr15	-	783	1	Intergenic	novelGene_4161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTGGTTGCAGTTAA	7385	False	NA	NA	False	AATAAA	-41	NA	97861991	97861208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_97861200_97862000
Isoform_57905_5	chr15	-	2878	1	Antisense	novelGene_ENSMUSG00000033065.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAGATAATCAAGAATC	NA	False	NA	NA	False	NA	NA	NA	98017366	98014488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_98014500_98017400
Isoform_57906_15	chr15	-	165	1	Intergenic	novelGene_4162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGGATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98041676	98041511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98041500_98041700
Isoform_57907_36	chr15	-	164	1	Intergenic	novelGene_3781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAAAAATGTGT	NA	False	NA	NA	False	NA	NA	NA	12203623	12203459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_12203500_12203600
Isoform_57909_3	chr15	+	386	1	Antisense	novelGene_ENSMUSG00000022992.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCTTCCTTGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98416705	98417091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_98416700_98417100
Isoform_57915_5	chr15	-	1668	1	ISM	ENSMUSG00000011960.13	ENSMUST00000169707.8	7397	10	30566	1	2663	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTTTGTATGTTCCG	NA	False	NA	NA	False	AATAAA	-21	NA	98438238	98436570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_98436600_98438200
Isoform_57916_3	chr15	-	2357	1	ISM	ENSMUSG00000011960.13	ENSMUST00000169707.8	7397	10	29877	1	1974	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTTTGTATGTTCCG	NA	False	NA	NA	False	AATAAA	-21	NA	98438927	98436570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_98436600_98438900
Isoform_57918_3	chr15	-	3356	1	ISM	ENSMUSG00000011960.13	ENSMUST00000169707.8	7397	10	28872	7	969	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGATCCTTGTTTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	98439932	98436576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_98436600_98439900
Isoform_57919_6	chr15	-	185	1	Intergenic	novelGene_4163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACAGTTCTCCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	98458682	98458497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98458500_98458700
Isoform_57920_3	chr15	+	1613	1	Genic_Genomic	ENSMUSG00000091050.2	novel	NA	NA	NA	NA	648	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATTATATATA	9465	False	NA	NA	False	NA	NA	NA	98465852	98467465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_+_98465900_98467500
Isoform_57921_10	chr15	-	179	1	Antisense	novelGene_ENSMUSG00000091050.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGCCCCTTTACCC	NA	False	NA	NA	False	NA	NA	NA	98466417	98466238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_98466200_98466400
Isoform_57922_5	chr15	-	176	1	Intergenic	novelGene_4164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTATACCGGGAAAAGGG	9067	False	NA	NA	False	NA	NA	NA	98473713	98473537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98473500_98473700
Isoform_57924_26	chr15	-	177	1	Intergenic	novelGene_3782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTTTTGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	12229707	12229530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_12229500_12229700
Isoform_57926_9	chr15	-	173	1	Intergenic	novelGene_4165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACAGT	9858	False	NA	NA	False	NA	NA	NA	98557911	98557738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98557700_98557900
Isoform_57927_4	chr15	+	176	1	Intergenic	novelGene_4166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	98558059	98558235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98558100_98558200
Isoform_57928_5	chr15	-	199	1	Intergenic	novelGene_4167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCGTATAAACTTTCTC	6484	False	NA	NA	False	NA	NA	NA	98561285	98561086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98561100_98561300
Isoform_57929_20	chr15	+	177	1	Intergenic	novelGene_4168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	98563166	98563343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98563200_98563300
Isoform_57930_3	chr15	-	163	1	Intergenic	novelGene_4169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	901	False	NA	NA	False	NA	NA	NA	98566868	98566705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98566700_98566900
Isoform_57931_9	chr15	+	175	1	Intergenic	novelGene_4170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGAGCCCCCA	1340	False	NA	NA	False	NA	NA	NA	98569369	98569544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98569400_98569500
Isoform_57932_33	chr15	-	177	1	Intergenic	novelGene_4171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTAAAAAAAATCCAAT	8152	False	NA	NA	False	NA	NA	NA	98596518	98596341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98596300_98596500
Isoform_57933_24	chr15	+	169	1	Intergenic	novelGene_4172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAATAAAAATAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	98596853	98597022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98596900_98597000
Isoform_57934_47	chr15	+	155	1	Intergenic	novelGene_4173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGGAGCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	98604829	98604984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98604800_98605000
Isoform_57935_38	chr15	+	177	1	Intergenic	novelGene_4174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCAGATCCTTTA	NA	False	NA	NA	False	NA	NA	NA	98611341	98611518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98611300_98611500
Isoform_57936_5	chr15	-	2428	1	FSM	ENSMUSG00000003355.8	ENSMUST00000229562.2	2411	1	-22	5	-10	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	98626043	98623615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_98623600_98626000
Isoform_57937_15	chr15	+	187	1	Antisense	novelGene_ENSMUSG00000003355.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	98623787	98623974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_98623800_98624000
Isoform_57955_125	chr15	-	200	1	Intergenic	novelGene_4175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATAAGAGTTTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	98681814	98681614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98681600_98681800
Isoform_57956_40	chr15	-	180	1	Intergenic	novelGene_4176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAATGTTGTCCTGGGC	NA	False	NA	NA	False	NA	NA	NA	98682010	98681830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98681800_98682000
Isoform_57957_81	chr15	-	560	1	FSM	ENSMUSG00000068706.4	ENSMUST00000090488.4	482	1	-25	-53	-25	53	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATAGA	NA	False	NA	NA	False	NA	NA	NA	5150642	5150082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_5150100_5150600
Isoform_57958_7	chr15	-	178	1	Intergenic	novelGene_4177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	98714392	98714214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98714200_98714400
Isoform_57959_6	chr15	-	201	1	Intergenic	novelGene_4178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAGCACTTGGGAGAGG	NA	False	NA	NA	False	NA	NA	NA	98715410	98715209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98715200_98715400
Isoform_57960_5	chr15	-	2209	1	ISM	ENSMUSG00000048154.18	ENSMUST00000178486.9	19805	55	37299	7	3280	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAAGTGCCTCTGTCCC	9616	False	NA	NA	False	NA	NA	NA	98731765	98729556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_98729600_98731800
Isoform_57962_4	chr15	-	2282	1	ISM	ENSMUSG00000048154.18	ENSMUST00000178486.9	19805	55	37226	7	3207	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAAGTGCCTCTGTCCC	9543	False	NA	NA	False	NA	NA	NA	98731838	98729556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_98729600_98731800
Isoform_57964_6	chr15	-	1645	1	ISM	ENSMUSG00000048154.18	ENSMUST00000178486.9	19805	55	37862	8	3843	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACAAGTGCCTCTGTCC	9188	False	NA	NA	False	NA	NA	NA	98731202	98729557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_98729600_98731200
Isoform_57967_9	chr15	-	179	1	Intergenic	novelGene_4179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAC	NA	False	NA	NA	False	NA	NA	NA	98782508	98782329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98782300_98782500
Isoform_57968_27	chr15	+	218	1	Intergenic	novelGene_4180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTCTTCTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	98785845	98786063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98785800_98786100
Isoform_57971_10	chr15	-	171	1	Intergenic	novelGene_4181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	9820	False	NA	NA	False	NA	NA	NA	98822285	98822114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98822100_98822300
Isoform_57997_3	chr15	+	200	1	Intergenic	novelGene_4182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAGAAAAATAAGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	98895558	98895758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98895600_98895800
Isoform_57998_282	chr10	-	177	1	Intergenic	novelGene_850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56099836	56099659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_56099700_56099800
Isoform_57999_18	chr15	+	248	1	Intergenic	novelGene_4183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCGTTTTCCTTCCTTC	NA	False	NA	NA	False	AATAAA	-45	NA	98904259	98904507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98904300_98904500
Isoform_58000_17	chr12	-	156	1	Intergenic	novelGene_2686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	81669931	81669775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_81669800_81669900
Isoform_58019_61	chr15	-	177	1	Intergenic	novelGene_4184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATGTT	9044	False	NA	NA	False	NA	NA	NA	98944649	98944472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_98944500_98944600
Isoform_58021_30	chr15	+	175	1	Intergenic	novelGene_4185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAAATAAAACC	NA	False	NA	NA	False	NA	NA	NA	98971731	98971906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_98971700_98971900
Isoform_58024_15	chr6	-	158	1	Intergenic	novelGene_9545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114899400	114899242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_114899200_114899400
Isoform_58028_3	chr15	+	215	1	Intergenic	novelGene_4186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCAGCACTCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	99013944	99014159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99013900_99014200
Isoform_58029_3	chr15	+	155	1	Intergenic	novelGene_4187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	99022543	99022698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99022500_99022700
Isoform_58032_29	chr15	+	176	1	FSM	ENSMUSG00000100599.3	ENSMUST00000190683.2	1428	1	1252	0	1252	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	99150970	99151146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_99151000_99151100
Isoform_58034_42	chr15	+	235	1	Intergenic	novelGene_4188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTACCATGTGCATGC	NA	False	NA	NA	False	NA	NA	NA	99181214	99181449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99181200_99181400
Isoform_58036_56	chr15	-	175	1	Intergenic	novelGene_4189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATTTTTTATCTTTT	2896	False	NA	-1	True	NA	NA	NA	99284303	99284128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_99284100_99284300
Isoform_58045_25	chr15	+	177	1	Intergenic	novelGene_4190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACAGCTGGTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	99317900	99318077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99317900_99318100
Isoform_58046_22	chr15	+	176	1	Intergenic	novelGene_4191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	99342393	99342569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99342400_99342600
Isoform_58047_6	chr15	+	175	2	Antisense	novelGene_ENSMUSG00000023009.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	99348136	99348341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_99348293_99348322
Isoform_58053_22	chr15	-	2515	1	Intergenic	novelGene_3783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACACTAGAAAAAGACAGG	NA	False	NA	NA	False	ATTAAA	-41	NA	12329269	12326754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_12326800_12329300
Isoform_58054_11	chr14	+	176	1	Intergenic	novelGene_3417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26323844	26324020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_26323800_26324000
Isoform_58055_6	chr15	-	169	1	Intergenic	novelGene_4192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTACTTAAAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	99508504	99508335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_99508300_99508500
Isoform_58057_3	chr15	+	178	1	Antisense	novelGene_ENSMUSG00000023015.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATCACATACTAA	NA	False	NA	NA	False	NA	NA	NA	99533054	99533232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_99533100_99533200
Isoform_58058_74	chr15	+	156	1	Intergenic	novelGene_4193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	99557218	99557374	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99557200_99557400
Isoform_58059_5	chr15	-	174	1	Intergenic	novelGene_3784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	12337612	12337438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_12337400_12337600
Isoform_58060_25	chr15	+	177	1	Intergenic	novelGene_4194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	99566059	99566236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99566100_99566200
Isoform_58061_4	chr15	-	4131	1	Genic_Genomic	ENSMUSG00000091604.3	novel	NA	NA	NA	NA	2960	3776	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTAGTGTCTGGACCA	1175	False	NA	NA	False	AATAAA	-20	NA	99600411	99596280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_-_99596300_99600400
Isoform_58070_13	chr15	+	173	1	Intergenic	novelGene_4195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAACCAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	99660160	99660333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99660200_99660300
Isoform_58072_10	chr15	+	176	1	Intergenic	novelGene_4196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAGAAAA	267	False	NA	NA	False	NA	NA	NA	99671386	99671562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99671400_99671600
Isoform_58094_9	chr15	+	177	1	Intergenic	novelGene_4198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTTTTTTAAAGAGT	6536	False	NA	NA	False	NA	NA	NA	99698759	99698936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99698800_99698900
Isoform_58098_42	chr15	-	241	1	Intergenic	novelGene_4199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATGGCTC	3466	False	NA	NA	False	NA	NA	NA	99720329	99720088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_99720100_99720300
Isoform_58101_22	chr15	+	188	1	Intergenic	novelGene_4200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAAAAAGGCAAGACA	NA	False	NA	NA	False	NA	NA	NA	99770078	99770266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99770100_99770300
Isoform_58102_30	chr7	+	177	1	Intergenic	novelGene_10240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	101610186	101610363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_101610200_101610400
Isoform_58103_5	chr15	-	266	1	Intergenic	novelGene_4202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACAGTTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	99827631	99827365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_99827400_99827600
Isoform_58106_3	chr15	-	837	1	FSM	ENSMUSG00000100084.3	ENSMUST00000188271.3	1130	1	-12	305	-12	-305	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCTGA	4274	False	NA	NA	False	NA	NA	NA	99871180	99870343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_99870300_99871200
Isoform_58108_9	chr15	+	179	1	Intergenic	novelGene_4203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAAAAT	224	False	NA	NA	False	NA	NA	NA	99875816	99875995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99875800_99876000
Isoform_58110_3	chr15	-	175	1	Intergenic	novelGene_4204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAGAAAAAGAA	9894	False	NA	NA	False	NA	NA	NA	99906042	99905867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_99905900_99906000
Isoform_5813_13	chr10	+	1593	9	FSM	ENSMUSG00000053219.16	ENSMUST00000181645.8	1579	9	-15	1	-15	-1	multi-exon	FALSE	canonical	3	14	junction_1	39.8708853676464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGTGCTCCAGAAGTT	NA	False	NA	4	True	AATAAA	-14	NA	22034452	22059815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
Isoform_58132_32	chr15	+	213	1	Intergenic	novelGene_4205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAACAGCCAGAGTT	NA	False	NA	NA	False	AATAAA	-11	NA	99942214	99942427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99942200_99942400
Isoform_58134_17	chr15	+	176	1	Intergenic	novelGene_4206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGGAAAATGCA	NA	False	NA	NA	False	NA	NA	NA	99947970	99948146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99948000_99948100
Isoform_58135_36	chr15	+	187	1	Intergenic	novelGene_4207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCCACCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	99952425	99952612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_99952400_99952600
Isoform_58137_80	chr15	-	178	1	Intergenic	novelGene_4208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGGGAAACT	NA	False	NA	NA	False	NA	NA	NA	99977688	99977510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_99977500_99977700
Isoform_58138_3	chr15	-	166	1	Intergenic	novelGene_4209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAAAAAAATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	99982396	99982230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_99982200_99982400
Isoform_58141_19	chr15	+	177	1	Intergenic	novelGene_4210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTAAAGCCGGGC	1665	False	NA	NA	False	NA	NA	NA	100085894	100086071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_100085900_100086100
Isoform_58142_4	chr15	+	182	1	Intergenic	novelGene_3785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAATCCCAAACCC	NA	False	NA	NA	False	NA	NA	NA	12508031	12508213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_12508000_12508200
Isoform_58143_8	chr15	+	178	1	Intergenic	novelGene_4211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAACACCAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	100094448	100094626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_100094400_100094600
Isoform_58148_4	chr15	+	2422	2	NNC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	13894	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTTTAATTCTTAAAC	NA	False	NA	9	True	AATAAA	-13	NA	100114910	100117354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr15_+_100116411_100116432
Isoform_5815_4	chr10	+	1279	7	NIC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	-2	-131	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	36.5957647822805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAACACATTTTAAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	22034465	22059682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_22034618_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
Isoform_58151_27	chr15	-	170	1	Intergenic	novelGene_4212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAACATAGGAGT	NA	False	NA	NA	False	NA	NA	NA	100141863	100141693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_100141700_100141900
Isoform_58153_19	chr15	+	161	1	Intergenic	novelGene_4213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTTTTAAAAATTAAAA	3834	False	NA	NA	False	NA	NA	NA	100160810	100160971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_100160800_100161000
Isoform_58155_11	chr15	-	172	1	Intergenic	novelGene_4214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100180748	100180576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_100180600_100180700
Isoform_58157_4	chr15	+	627	1	NIC	ENSMUSG00000054619.8	novel	674	3	NA	NA	4	75	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAAAACAAACAAACAAA	570	False	NA	NA	False	NA	NA	NA	100202673	100203300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_100202700_100203300
Isoform_58159_5	chr15	-	179	1	Intergenic	novelGene_3786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATGCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12566739	12566560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_12566600_12566700
Isoform_58160_327	chr8	-	167	1	Intergenic	novelGene_10899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	107898078	107897911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_107897900_107898100
Isoform_58161_4	chr15	-	177	1	Intergenic	novelGene_4216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATGTCTTT	NA	False	NA	NA	False	NA	NA	NA	100344435	100344258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_100344300_100344400
Isoform_58162_46	chr15	+	1254	1	FSM	ENSMUSG00000078300.4	ENSMUST00000100754.5	1002	1	-71	-181	-71	181	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	91	False	NA	NA	False	AATAAA	-15	NA	12574903	12576157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_12574900_12576200
Isoform_5817_13	chr10	+	1294	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	-19	-1	-19	1	multi-exon	FALSE	canonical	3	64	junction_1	14.8286509463568	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATGTGCTCCAGAAGT	NA	False	NA	3	True	AATAAA	-13	NA	22049400	22059814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
Isoform_58173_19	chr15	-	198	1	Intergenic	novelGene_4217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100537641	100537443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_100537400_100537600
Isoform_58174_6	chr15	+	179	1	Intergenic	novelGene_4218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTAAAAAAAATAAGAGATG	NA	False	NA	NA	False	NA	NA	NA	100569082	100569261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_100569100_100569300
Isoform_58175_4	chr15	+	188	1	Intergenic	novelGene_4219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAATAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	100581861	100582049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_100581900_100582000
Isoform_58176_7	chr15	-	171	1	Intergenic	novelGene_4220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACAATTATTATTTTGT	3090	False	NA	NA	False	NA	NA	NA	100616942	100616771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_100616800_100616900
Isoform_58178_4	chr15	+	1856	1	NIC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	15	-11346	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100659642	100661498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_100659600_100661500
Isoform_58180_41	chr15	-	185	1	Intergenic	novelGene_4221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAAAGGAGAGC	NA	False	NA	NA	False	NA	NA	NA	100861962	100861777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_100861800_100862000
Isoform_58181_6	chr15	+	177	1	Intergenic	novelGene_3787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAGGCTGGATCAAGA	NA	False	NA	NA	False	NA	NA	NA	12791029	12791206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_12791000_12791200
Isoform_58187_34	chr15	+	1497	1	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	37	-7035	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAAAAAGC	6278	False	NA	NA	False	NA	NA	NA	101122105	101123602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_101122100_101123600
Isoform_58188_12	chr15	-	156	1	Intergenic	novelGene_4222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	101153352	101153196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_101153200_101153400
Isoform_58189_3	chr15	-	176	1	Intergenic	novelGene_4223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	101157384	101157208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_101157200_101157400
Isoform_58190_4	chr15	+	176	1	FSM	ENSMUSG00000116395.2	ENSMUST00000229927.2	2437	1	1939	322	1939	-322	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGAATTTCC	NA	False	NA	NA	False	NA	NA	NA	101215921	101216097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_101215900_101216100
Isoform_58191_45	chr15	-	173	1	Intergenic	novelGene_4224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	101908492	101908319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_101908300_101908500
Isoform_58194_7	chr15	-	170	1	Intergenic	novelGene_4225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATAGTCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	101985751	101985581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_101985600_101985800
Isoform_58212_4	chr15	+	1789	1	Intergenic	novelGene_4226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATTCCTCTCCATGGTT	145	False	NA	NA	False	NA	NA	NA	102103224	102105013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102103200_102105000
Isoform_5822_4	chr10	+	1253	6	NIC	ENSMUSG00000053219.16	novel	1218	6	NA	NA	-44	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	29.7281011838967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTATGTGCTCCAGAAG	NA	False	NA	NA	False	AATAAA	-12	NA	22049773	22250035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_22049866_22050191_22050310_22246764_22247014_22247265_22247530_22248087_22248258_22249675
Isoform_58227_3	chr15	+	178	1	Intergenic	novelGene_4228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAAAAGACCACGTG	NA	False	NA	NA	False	NA	NA	NA	102129511	102129689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102129500_102129700
Isoform_58229_8	chr15	+	2296	1	NIC	ENSMUSG00000045665.6	novel	1754	2	NA	NA	0	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACTTGTCCTCTCCTGT	NA	False	NA	22	True	AATAAA	-18	NA	102187888	102190184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102187900_102190200
Isoform_5823_6	chr10	+	2919	15	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	25	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.5510545926754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672908	23703865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681044_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_58230_17	chr15	+	2202	1	NIC	ENSMUSG00000045665.6	novel	1754	2	NA	NA	90	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTCACTTGTCCTCTC	NA	False	NA	18	True	AATAAA	-14	NA	102187978	102190180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_102188000_102190200
Isoform_58235_58	chr15	-	157	1	Intergenic	novelGene_4229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATT	4837	False	NA	NA	False	NA	NA	NA	102219661	102219504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102219500_102219700
Isoform_58237_10	chr15	+	177	1	Genic_Genomic	ENSMUSG00000058290.5	novel	NA	NA	NA	NA	-114	2096	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	2715	False	NA	NA	False	NA	NA	NA	102227430	102227607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_+_102227400_102227600
Isoform_5824_19	chr10	+	2769	14	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.4205700752365	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672901	23703865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681044_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_58240_6	chr15	+	354	1	Intergenic	novelGene_4230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATAAATGTAGTTGGT	8636	False	NA	NA	False	NA	NA	NA	102233351	102233705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102233400_102233700
Isoform_58242_37	chr15	-	176	1	Intergenic	novelGene_4231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATATCGA	8913	False	NA	NA	False	NA	NA	NA	102243707	102243531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102243500_102243700
Isoform_58243_59	chr15	+	168	1	Intergenic	novelGene_4232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTAAAAAAGATAT	NA	False	NA	NA	False	NA	NA	NA	102257082	102257250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102257100_102257200
Isoform_58245_4	chr15	-	157	1	Intergenic	novelGene_4233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAATAAATCTTT	9472	False	NA	NA	False	NA	NA	NA	102269895	102269738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102269700_102269900
Isoform_58247_23	chr15	-	186	1	Intergenic	novelGene_4234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGATGTCTCTAATGAAG	NA	False	NA	NA	False	NA	NA	NA	102288331	102288145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102288100_102288300
Isoform_58248_16	chr15	-	173	1	Intergenic	novelGene_4235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	102296212	102296039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102296000_102296200
Isoform_5825_137	chr10	+	2820	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	18	-1	18	1	multi-exon	FALSE	canonical	3	72	junction_6	14.8148334428987	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGTATTCATTCAAAA	NA	False	NA	25	True	AATAAA	-18	NA	23672901	23703867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_58252_17	chr15	-	173	1	Intergenic	novelGene_4236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102311205	102311032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102311000_102311200
Isoform_58256_24	chr15	-	208	1	Intergenic	novelGene_4237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATACTTC	NA	False	NA	NA	False	NA	NA	NA	102328668	102328460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102328500_102328700
Isoform_5826_4	chr10	+	2584	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	-22	275	-22	-275	multi-exon	FALSE	canonical	3	72	junction_6	14.8148334428987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTCTTTGTTTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	23672861	23703591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_5828_23	chr10	+	2661	13	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	20	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	23.1336695460678	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGTATTCATTCAAAA	NA	False	NA	25	True	AATAAA	-18	NA	23672903	23703867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_58287_5	chr15	-	231	1	Intergenic	novelGene_4238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAGAGAAAGAAAGAA	7715	False	NA	NA	False	NA	NA	NA	102359283	102359052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102359100_102359300
Isoform_58288_3	chr15	+	2215	1	Genic_Genomic	ENSMUSG00000023047.12	novel	NA	NA	NA	NA	102	6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGTGTTTTTACTTCT	NA	False	NA	22	True	AATAAA	-22	NA	102360859	102363074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_+_102360900_102363100
Isoform_58289_5	chr15	-	184	1	Intergenic	novelGene_4239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATCTGAGAACT	NA	False	NA	NA	False	NA	NA	NA	102374252	102374068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102374100_102374300
Isoform_58290_5	chr15	-	178	1	Intergenic	novelGene_4240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACC	NA	False	NA	NA	False	NA	NA	NA	102376045	102375867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102375900_102376000
Isoform_58294_26	chr15	-	4192	1	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7068	False	NA	NA	False	NA	NA	NA	102392623	102388431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_102388400_102392600
Isoform_5830_185	chr10	+	2158	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	14	1263	-12	-2	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGAGTCCCAAGAACT	NA	False	NA	21	True	AATAAA	-23	NA	24025238	24064857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
Isoform_58300_52	chr15	+	178	1	Intergenic	novelGene_4241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	102435624	102435802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102435600_102435800
Isoform_58301_4	chr15	+	175	1	Intergenic	novelGene_3788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACAAAGAGGAATC	NA	False	NA	NA	False	NA	NA	NA	13330465	13330640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_13330500_13330600
Isoform_58302_7	chr15	+	200	1	Intergenic	novelGene_4242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCATATTATATCTTA	1536	False	NA	NA	False	NA	NA	NA	102448217	102448417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102448200_102448400
Isoform_58303_18	chr15	-	177	1	Intergenic	novelGene_4243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATATCCAATAT	NA	False	NA	NA	False	NA	NA	NA	102458966	102458789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102458800_102459000
Isoform_58306_5	chr15	-	179	1	Intergenic	novelGene_4244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102497651	102497472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102497500_102497700
Isoform_58311_145	chr15	+	179	1	Intergenic	novelGene_4245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	102560616	102560795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102560600_102560800
Isoform_58314_10	chr15	+	4089	1	Antisense	novelGene_ENSMUSG00000062683.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGGGAATTAAATTTAAT	NA	False	NA	NA	False	AGTAAA	-23	NA	102574430	102578519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_102574400_102578500
Isoform_58315_7	chr15	-	187	1	Intergenic	novelGene_4246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	102598096	102597909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102597900_102598100
Isoform_58316_7	chr15	+	158	1	Intergenic	novelGene_4247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	102809570	102809728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102809600_102809700
Isoform_58318_6	chr15	-	3568	1	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	GGGGCT	-34	NA	102840089	102836521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_102836500_102840100
Isoform_58319_14	chr15	-	740	1	Intergenic	novelGene_4248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTGAGATGAGTGTGC	NA	False	NA	-2	True	AATAAA	-15	NA	102840055	102839315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_102839300_102840100
Isoform_5832_91	chr10	+	2339	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	60	-1	60	1	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGCTTGGCTGTTCATT	NA	False	NA	6	True	AATAAA	-22	NA	24471399	24474577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
Isoform_58320_3	chr15	-	5096	1	Antisense	novelGene_ENSMUSG00000050328.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCGCCACCAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	102850048	102844952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_102845000_102850000
Isoform_58322_3	chr15	+	349	1	Intergenic	novelGene_4249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-1	True	NA	NA	False	NA	NA	NA	102981589	102981938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_102981600_102981900
Isoform_5835_4	chr10	+	2400	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	-4	2	-4	-2	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAAGGCTTGGCTGTTC	NA	False	NA	3	True	AATAAA	-19	NA	24471335	24474574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
Isoform_5836_3	chr10	+	4630	30	FSM	ENSMUSG00000019984.17	ENSMUST00000092646.13	5098	30	39	429	-12	-208	multi-exon	FALSE	canonical	2	4	junction_10	16.8422067632588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTTTCATACTCTTG	NA	False	NA	12	True	AATAAA	-25	NA	24745922	24789150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
Isoform_5837_44	chr10	+	4631	29	FSM	ENSMUSG00000019984.17	ENSMUST00000020159.15	4798	29	-41	208	20	-208	multi-exon	TRUE	canonical	2	39	junction_7	9.84419439392103	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTTTCATACTCTTG	NA	False	NA	12	True	AATAAA	-25	NA	24745903	24789150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
Isoform_5838_55	chr10	+	4805	29	FSM	ENSMUSG00000019984.17	ENSMUST00000020159.15	4798	29	-10	3	0	-3	multi-exon	FALSE	canonical	2	39	junction_7	9.84419439392103	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	False	NA	10	True	AATAAA	-17	NA	24745934	24789355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
Isoform_58394_5	chr15	+	177	1	Intergenic	novelGene_4250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTTCTATTTGTA	NA	False	NA	NA	False	NA	NA	NA	103116789	103116966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_103116800_103117000
Isoform_58396_18	chr15	-	152	1	Intergenic	novelGene_4251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	103131231	103131079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_103131100_103131200
Isoform_58397_71	chr15	+	177	1	Intergenic	novelGene_4252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	750	False	NA	NA	False	NA	NA	NA	103136587	103136764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_103136600_103136800
Isoform_58398_8	chr15	-	1782	1	Genic_Genomic	ENSMUSG00000009575.15	novel	NA	NA	NA	NA	-26	-24979	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGGGGGGGGGGGGAC	NA	False	NA	NA	False	NA	NA	NA	103148269	103146487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_-_103146500_103148300
Isoform_584_606	SIRV2	+	522	1	FSM	SIRV2B	SIRV205	523	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	606	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1109	1631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV2_+_1100_1600
Isoform_5840_10	chr10	+	4344	21	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	37	0	intron_retention	FALSE	canonical	3	14	junction_14	130.463203624624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25235790	25399413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_58412_38	chr15	+	193	1	Intergenic	novelGene_4254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103202735	103202928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_103202700_103202900
Isoform_58418_30	chr1	-	174	1	Intergenic	novelGene_650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATTAAAA	6348	False	NA	NA	False	NA	NA	NA	181137855	181137681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_181137700_181137900
Isoform_58419_25	chr15	-	159	1	Intergenic	novelGene_3750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	5181155	5180996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_5181000_5181200
Isoform_5842_30	chr10	+	4299	20	FSM	ENSMUSG00000019978.17	ENSMUST00000053748.16	4385	20	86	0	28	0	multi-exon	FALSE	canonical	3	27	junction_12	117.367122957183	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25235781	25399413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_58420_6	chr15	-	361	1	Intergenic	novelGene_4256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCTTTAAATACTAA	9350	False	NA	NA	False	NA	NA	NA	103314180	103313819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_103313800_103314200
Isoform_58421_438	chr9	-	178	1	Intergenic	novelGene_11088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13702599	13702421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_13702400_13702600
Isoform_58424_25	chr15	+	229	1	Intergenic	novelGene_3789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAAGGTTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	16198721	16198950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_16198700_16199000
Isoform_58426_4	chr15	+	214	1	Intergenic	novelGene_3790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTATTTTGACCAAT	NA	False	NA	NA	False	NA	NA	NA	19279152	19279366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_19279200_19279400
Isoform_58427_26	chr15	+	176	1	Intergenic	novelGene_3791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19376328	19376504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_19376300_19376500
Isoform_58429_4	chr15	+	178	1	Intergenic	novelGene_3792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTCCCTTCAGCCTT	NA	False	NA	NA	False	NA	NA	NA	19413555	19413733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_19413600_19413700
Isoform_5843_19	chr10	+	4389	20	FSM	ENSMUSG00000019978.17	ENSMUST00000053748.16	4385	20	-4	0	-4	0	multi-exon	FALSE	canonical	3	27	junction_12	117.367122957183	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25235691	25399413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_58430_37	chr15	-	173	1	Intergenic	novelGene_3793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAGAGAGCTA	NA	False	NA	NA	False	NA	NA	NA	19526585	19526412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_19526400_19526600
Isoform_58433_4	chr15	-	184	1	Intergenic	novelGene_3794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGACCTCAGATTCTG	NA	False	NA	NA	False	NA	NA	NA	20848200	20848016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_20848000_20848200
Isoform_58434_6	chr15	-	173	1	Intergenic	novelGene_3795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTAAATCTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20932388	20932215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_20932200_20932400
Isoform_58435_21	chr15	-	178	1	Intergenic	novelGene_3796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAACTACATAAATGAA	NA	False	NA	NA	False	NA	NA	NA	22101321	22101143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_22101100_22101300
Isoform_58440_28	chr15	-	1495	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	210	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	3662	False	NA	NA	False	NA	NA	NA	22701347	22699825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_22700721_22700747
Isoform_5846_11	chr10	+	4244	19	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	20	0	intron_retention	FALSE	canonical	2	9	junction_12	105.482562481456	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25235773	25399413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_58460_116	chr15	-	4534	1	Intergenic	novelGene_3797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9886	False	NA	NA	False	NA	NA	NA	22704359	22699825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_22699800_22704400
Isoform_58461_82	chr15	-	4623	1	Intergenic	novelGene_3798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9797	False	NA	NA	False	NA	NA	NA	22704448	22699825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_22699800_22704400
Isoform_58468_29	chr15	-	1399	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	1	210	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	3758	False	NA	NA	False	NA	NA	NA	22701251	22699825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_22700721_22700747
Isoform_58483_28	chr15	-	4694	1	Intergenic	novelGene_3799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGACTTTTAGTTTTAA	9798	False	NA	NA	False	NA	NA	NA	22705092	22700398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_22700400_22705100
Isoform_58493_815	chr15	-	2760	1	Intergenic	novelGene_3800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	815	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCACAGTGGTAGGAGAA	9797	False	NA	NA	False	NA	NA	NA	22705093	22702333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_22702300_22705100
Isoform_5850_323	chr10	+	4098	18	FSM	ENSMUSG00000019978.17	ENSMUST00000218903.2	4115	18	19	-2	19	0	multi-exon	FALSE	canonical	3	273	junction_1	40.1674694938122	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25235772	25399413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_58520_22	chr15	-	176	1	Intergenic	novelGene_3802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	24424278	24424102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_24424100_24424300
Isoform_58522_3	chr15	+	176	1	Intergenic	novelGene_3803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAACTTACAAGGA	NA	False	NA	NA	False	NA	NA	NA	25268364	25268540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_25268400_25268500
Isoform_58523_259	chr15	-	178	1	Intergenic	novelGene_3804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTTTTTCTGA	NA	False	NA	-13	True	NA	NA	NA	25305759	25305581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_25305600_25305800
Isoform_58526_12	chr15	+	167	1	Intergenic	novelGene_3805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATACTAAGTC	NA	False	NA	NA	False	NA	NA	NA	25545403	25545570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_25545400_25545600
Isoform_58527_33	chr15	-	159	1	Intergenic	novelGene_3806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	25571757	25571598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_25571600_25571800
Isoform_58529_36	chr15	+	176	1	Intergenic	novelGene_3807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGTCACTAAACC	NA	False	NA	NA	False	NA	NA	NA	25695135	25695311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_25695100_25695300
Isoform_58531_7	chr15	-	163	1	Intergenic	novelGene_3808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	25718759	25718596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_25718600_25718800
Isoform_58533_30	chr15	-	178	1	Intergenic	novelGene_3809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGAACAGT	NA	False	NA	NA	False	NA	NA	NA	25741534	25741356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_25741400_25741500
Isoform_58534_97	chr15	-	209	1	Intergenic	novelGene_3810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGATTTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	25771418	25771209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_25771200_25771400
Isoform_58543_30	chr15	+	176	1	Intergenic	novelGene_3811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27184095	27184271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_27184100_27184300
Isoform_58544_6	chr15	+	168	1	Intergenic	novelGene_3812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27565353	27565521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_27565400_27565500
Isoform_58546_10	chr15	-	176	1	Intergenic	novelGene_3813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAGCCACTTA	NA	False	NA	NA	False	NA	NA	NA	28030741	28030565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_28030600_28030700
Isoform_58547_101	chr10	-	182	1	Intergenic	novelGene_1164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	108248412	108248230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_108248200_108248400
Isoform_58548_3	chr15	-	181	1	Intergenic	novelGene_3814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAGAAAAAAATAGAAA	NA	False	NA	NA	False	NA	NA	NA	28079317	28079136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_28079100_28079300
Isoform_58553_3	chr15	+	177	1	Intergenic	novelGene_3816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGAGGGAGCAGGGCCG	NA	False	NA	NA	False	NA	NA	NA	31186403	31186580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_31186400_31186600
Isoform_58554_34	chr15	+	170	1	Intergenic	novelGene_3817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAAGACCGAG	1719	False	NA	NA	False	NA	NA	NA	31226895	31227065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_31226900_31227100
Isoform_58561_10	chr15	+	1390	1	Intergenic	novelGene_3818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31531255	31532645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_31531300_31532600
Isoform_58564_7	chr15	+	187	1	Intergenic	novelGene_3819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31559191	31559378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_31559200_31559400
Isoform_58567_11	chr15	-	164	1	Intergenic	novelGene_3820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	31640750	31640586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_31640600_31640800
Isoform_5857_15	chr10	+	4288	18	NIC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-13	1	intron_retention	FALSE	canonical	3	30	junction_1	82.0204633087627	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25308483	25399412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_25308782_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_58570_17	chr15	-	3765	1	Intergenic	novelGene_3821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32938340	32934575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_32934600_32938300
Isoform_58573_35	chr15	+	2281	1	Intergenic	novelGene_3822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTAAAAAAAAAAAAAAATAG	144	False	NA	NA	False	NA	NA	NA	33221529	33223810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_33221500_33223800
Isoform_58576_9	chr15	-	4005	1	FSM	ENSMUSG00000038984.5	ENSMUST00000042021.5	4010	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTGTATTTAATATTACA	NA	False	NA	NA	False	AATAAA	-19	NA	33688025	33684020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_33684000_33688000
Isoform_58579_241	chr15	+	7016	1	FSM	ENSMUSG00000115318.2	ENSMUST00000227474.2	2906	1	2	-4112	2	4112	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33831595	33838611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_33831600_33838600
Isoform_58591_11	chr17	-	178	1	Intergenic	novelGene_5076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	57349468	57349290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_57349300_57349500
Isoform_58593_4	chr15	-	164	1	Intergenic	novelGene_3823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAATTAAAAAAAA	3310	False	NA	NA	False	NA	NA	NA	34096214	34096050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_34096000_34096200
Isoform_58603_21	chr15	-	203	1	Intergenic	novelGene_3824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGATCATTTGTTTAAAA	NA	False	NA	NA	False	ATTAAA	-8	NA	34183335	34183132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_34183100_34183300
Isoform_58604_3	chr15	-	181	1	Intergenic	novelGene_3825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTTGCTGCGTCTTT	NA	False	NA	NA	False	NA	NA	NA	34201722	34201541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_34201500_34201700
Isoform_58606_7	chr15	-	181	1	Intergenic	novelGene_3826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	34295553	34295372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_34295400_34295600
Isoform_58609_17	chr15	-	175	1	Intergenic	novelGene_3827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGTATAAATTGATA	NA	False	NA	NA	False	NA	NA	NA	34368624	34368449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_34368400_34368600
Isoform_58610_16	chr15	+	176	1	Intergenic	novelGene_3828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	34431218	34431394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_34431200_34431400
Isoform_58614_67	chr15	+	177	1	Intergenic	novelGene_3829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	35091046	35091223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_35091000_35091200
Isoform_58615_36	chr15	-	179	1	Intergenic	novelGene_3830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAACAAACACCA	NA	False	NA	NA	False	NA	NA	NA	35281738	35281559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_35281600_35281700
Isoform_58616_125	chr15	-	182	1	Intergenic	novelGene_3831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	35363509	35363327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_35363300_35363500
Isoform_58617_22	chr15	+	177	1	Intergenic	novelGene_3832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATATATTCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	35543104	35543281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_35543100_35543300
Isoform_58618_7	chr15	+	180	1	Intergenic	novelGene_3833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGATAAGTTGG	NA	False	NA	NA	False	NA	NA	NA	35730530	35730710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_35730500_35730700
Isoform_58619_3	chr15	-	4639	1	Antisense	novelGene_ENSMUSG00000037646.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35874313	35869674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_35869700_35874300
Isoform_58622_3	chr15	-	180	1	Intergenic	novelGene_3751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGAGAGAAGGTACTG	8293	False	NA	NA	False	NA	NA	NA	6572793	6572613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_6572600_6572800
Isoform_58627_5	chr15	+	197	1	Intergenic	novelGene_3834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	36549107	36549304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_36549100_36549300
Isoform_58644_4	chr15	+	2671	1	Intergenic	novelGene_3836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGCCAGA	NA	False	NA	NA	False	AAAACA	-9	NA	36668098	36670769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_36668100_36670800
Isoform_58646_5	chr15	+	1798	1	Intergenic	novelGene_3837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCTGGTTTTGTCA	248	False	NA	NA	False	ATTAAA	-20	NA	36760677	36762475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_36760700_36762500
Isoform_58675_3	chr15	+	5193	1	Intergenic	novelGene_3838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	36785208	36790401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_36785200_36790400
Isoform_58676_908	chr15	+	978	1	FSM	ENSMUSG00000067547.7	ENSMUST00000146631.2	819	1	-37	-122	-37	122	mono-exon	FALSE	NA	NA	NA	NA	NA	908	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	6683366	6684344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_+_6683400_6684300
Isoform_58679_3	chr15	-	1612	1	Intergenic	novelGene_3839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36980199	36978587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_36978600_36980200
Isoform_58697_95	chr15	+	191	1	Intergenic	novelGene_3840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATATATAAAAAAAAAGAAAG	NA	False	NA	NA	False	AATATA	-2	NA	37001858	37002049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_37001900_37002000
Isoform_587_642	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	642	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV2_+_4000_4500
Isoform_58700_14	chr15	-	210	1	Intergenic	novelGene_3841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTCCCATAATTTAGAT	NA	False	NA	NA	False	NA	NA	NA	37011228	37011018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_37011000_37011200
Isoform_58701_14	chr15	+	168	1	Intergenic	novelGene_3842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37021646	37021814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_37021600_37021800
Isoform_58702_3	chr15	-	1352	1	Intergenic	novelGene_3843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	5823	False	NA	NA	False	NA	NA	NA	37074580	37073228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_37073200_37074600
Isoform_58704_6	chr15	-	171	1	Intergenic	novelGene_3844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAGAGAGAGACTT	NA	False	NA	NA	False	NA	NA	NA	37246961	37246790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_37246800_37247000
Isoform_58705_24	chr15	-	174	1	Intergenic	novelGene_3845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATTTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	37272474	37272300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_37272300_37272500
Isoform_58711_5	chr15	+	177	1	Intergenic	novelGene_3846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCTGGAATGTTTT	NA	False	NA	NA	False	NA	NA	NA	37949354	37949531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_37949400_37949500
Isoform_58714_6	chr15	+	190	1	Intergenic	novelGene_3847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAACAGGTATTTA	NA	False	NA	NA	False	NA	NA	NA	38039702	38039892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_38039700_38039900
Isoform_58715_9	chr15	+	4098	1	Intergenic	novelGene_3848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGGGAGCCACTGCTTA	NA	False	NA	NA	False	NA	NA	NA	38068571	38072669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_38068600_38072700
Isoform_58717_6	chr15	-	176	1	Intergenic	novelGene_3752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATGCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	7089695	7089519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_7089500_7089700
Isoform_58718_76	chr15	+	169	1	Intergenic	novelGene_3849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAACAAAAAAAAA	6215	False	NA	NA	False	NA	NA	NA	38094200	38094369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_38094200_38094400
Isoform_58726_6	chr15	+	1283	1	Antisense	novelGene_ENSMUSG00000037465.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTGTGGTAAGAACTGA	NA	False	NA	NA	False	AATAAA	-14	NA	38294658	38295941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_+_38294700_38295900
Isoform_58741_12	chr15	-	172	1	Intergenic	novelGene_3851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAATAAAAAAAAAAA	3896	False	NA	NA	False	NA	NA	NA	38705898	38705726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_38705700_38705900
Isoform_58743_213	chrX	-	177	1	Intergenic	novelGene_11944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	47758428	47758251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_47758300_47758400
Isoform_58746_5	chr4	+	219	1	Intergenic	novelGene_7490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	35990936	35991155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_35990900_35991200
Isoform_58749_3	chr15	-	2875	1	Intergenic	novelGene_3852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	4469	False	NA	NA	False	NA	NA	NA	39108201	39105326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_39105300_39108200
Isoform_58750_3	chr15	-	5188	2	Antisense	novelGene_ENSMUSG00000037386.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	2129	False	NA	NA	False	NA	NA	NA	39110541	39105327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr15_-_39108953_39108978
Isoform_58755_99	chr3	+	176	1	Intergenic	novelGene_7237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	100754600	100754776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_100754600_100754800
Isoform_58757_14	chr15	+	188	1	Intergenic	novelGene_3856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTGTAGGGATAAA	NA	False	NA	NA	False	NA	NA	NA	39645361	39645549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_39645400_39645500
Isoform_58765_215	chr15	-	177	1	Intergenic	novelGene_3857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	41054257	41054080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_41054100_41054300
Isoform_58768_24	chr15	+	177	1	Intergenic	novelGene_3863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	41645410	41645587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_41645400_41645600
Isoform_58769_398	chr15	+	207	1	Intergenic	novelGene_3864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAATACAC	NA	False	NA	NA	False	NA	NA	NA	41810478	41810685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_41810500_41810700
Isoform_58770_154	chr15	-	174	1	Intergenic	novelGene_3865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTAGTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	41855345	41855171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_41855200_41855300
Isoform_58771_3	chr15	+	180	1	Intergenic	novelGene_3866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	42807793	42807973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_42807800_42808000
Isoform_58774_7	chr15	+	3635	1	ISM	ENSMUSG00000054263.13	ENSMUST00000171588.2	9655	19	39496	6	39496	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAGTAAATTTGGACAT	6991	False	NA	NA	False	AATAAA	-19	NA	7223329	7226964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_7223300_7227000
Isoform_58779_7	chr15	+	2122	1	ISM	ENSMUSG00000054263.13	ENSMUST00000171588.2	9655	19	41009	6	41009	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAGTAAATTTGGACAT	8504	False	NA	NA	False	AATAAA	-19	NA	7224842	7226964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_+_7224800_7227000
Isoform_58782_67	chr15	+	177	1	Intergenic	novelGene_3753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	7657919	7658096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_7657900_7658100
Isoform_58784_37	chr15	+	387	1	Intergenic	novelGene_3867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	44773360	44773747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_44773400_44773700
Isoform_58787_22	chr15	+	174	1	Intergenic	novelGene_3868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATTAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	45515050	45515224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_45515000_45515200
Isoform_58789_7	chr15	-	196	1	Intergenic	novelGene_3869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGTTTTCTATATATTG	NA	False	NA	NA	False	NA	NA	NA	47726321	47726125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_47726100_47726300
Isoform_58790_11	chr15	+	176	1	Intergenic	novelGene_3870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGCATCAAAGAT	NA	False	NA	NA	False	NA	NA	NA	48577222	48577398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_48577200_48577400
Isoform_58792_7	chr15	+	203	1	Intergenic	novelGene_3871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGGTTAAATTG	NA	False	NA	NA	False	NA	NA	NA	50096952	50097155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_50097000_50097200
Isoform_58793_86	chr7	+	176	1	Intergenic	novelGene_10132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79112539	79112715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_79112500_79112700
Isoform_58794_3	chr15	-	2526	1	ISM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	231967	447	169797	-447	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGACGGCTTTGGTAT	NA	False	NA	-6	True	AATAAA	-16	NA	50521120	50518594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr15_-_50518600_50521100
Isoform_58795_4	chr15	+	2562	1	Intergenic	novelGene_3873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-38	NA	50576053	50578615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_50576100_50578600
Isoform_58796_19	chr15	+	3790	1	Intergenic	novelGene_3874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAACCCATAGACTA	NA	False	NA	NA	False	NA	NA	NA	50655025	50658815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_50655000_50658800
Isoform_58798_5	chr15	-	545	1	NIC	ENSMUSG00000038679.17	novel	4436	7	NA	NA	35	-43286	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	10003	False	NA	NA	False	ATTAAA	-15	NA	50753402	50752857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_-_50752900_50753400
Isoform_58801_12	chr15	-	175	1	Intergenic	novelGene_3875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACCAAAAAAACCTTAAATA	NA	False	NA	NA	False	NA	NA	NA	51602739	51602564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_51602600_51602700
Isoform_58802_24	chr15	+	364	1	Intergenic	novelGene_3876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51703660	51704024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_51703700_51704000
Isoform_58803_5	chr15	-	226	1	Intergenic	novelGene_3877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTAGTGATTGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	51736585	51736359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_51736400_51736600
Isoform_58804_6	chr15	+	2493	1	NIC	ENSMUSG00000022313.11	novel	2921	3	NA	NA	-5	-2718	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTTTAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	51740868	51743361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_51740900_51743400
Isoform_58805_11	chr15	+	178	1	Intergenic	novelGene_3878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATGCAACAAATATT	NA	False	NA	NA	False	NA	NA	NA	51749489	51749667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_51749500_51749700
Isoform_58806_3	chr15	+	2076	1	Intergenic	novelGene_3754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCATTCA	7577	False	NA	NA	False	NA	NA	NA	7982639	7984715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_7982600_7984700
Isoform_58807_3	chr15	-	169	1	Intergenic	novelGene_3879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTTTAATCTAACAATT	NA	False	NA	NA	False	NA	NA	NA	51778453	51778284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_51778300_51778500
Isoform_5882_10	chr10	+	3528	15	FSM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	24	99	24	91	multi-exon	FALSE	canonical	3	7	junction_6	3.14934395500694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATCTTCTCTTGGAATT	NA	False	NA	4	True	ATTAAA	-13	NA	26648496	26794545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_26648693_26721927_26722125_26725870_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776_26763984_26765727_26765869_26788602_26788728_26792388_26792451_26793000
Isoform_58822_17	chr15	-	828	1	FSM	ENSMUSG00000057262.3	ENSMUST00000081993.3	612	1	-142	-74	-142	74	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGACCAGTTTCTCAAA	NA	False	NA	NA	False	AATAAA	-38	NA	52341766	52340938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_52340900_52341800
Isoform_58824_5	chr15	+	255	1	Intergenic	novelGene_3756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCCTCTTATTTAATAA	NA	False	NA	NA	False	NA	NA	NA	8036216	8036471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_8036200_8036500
Isoform_58825_99	chr15	+	197	1	Intergenic	novelGene_3880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCTCAGCTCCTCACTT	NA	False	NA	NA	False	NA	NA	NA	52938949	52939146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_52938900_52939100
Isoform_58828_10	chr15	+	179	1	Intergenic	novelGene_3757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAATACTTCAAGT	NA	False	NA	NA	False	NA	NA	NA	8050537	8050716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_8050500_8050700
Isoform_58830_30	chr15	-	163	1	Intergenic	novelGene_3882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54685828	54685665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_54685700_54685800
Isoform_58832_13	chr15	+	206	1	Intergenic	novelGene_3758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTAGATGGCCAAAACAT	NA	False	NA	NA	False	NA	NA	NA	8074345	8074551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_8074300_8074600
Isoform_58833_3	chr15	+	3139	1	NIC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	49	-93381	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCG	NA	False	NA	NA	False	NA	NA	NA	54975761	54978900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_54975800_54978900
Isoform_58834_13	chr15	+	3032	1	NIC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	49	-93381	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCG	NA	False	NA	NA	False	NA	NA	NA	54975868	54978900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr15_+_54975900_54978900
Isoform_58835_5	chr15	+	161	1	Intergenic	novelGene_3883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTAAAAAATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	54992749	54992910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_54992700_54992900
Isoform_58836_3	chr15	-	176	1	Intergenic	novelGene_3884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGCGAGTAGGGAT	NA	False	NA	NA	False	NA	NA	NA	55008725	55008549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_55008500_55008700
Isoform_58837_23	chr15	-	171	1	Intergenic	novelGene_3885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	55032073	55031902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_55031900_55032100
Isoform_5884_7	chr10	+	3627	15	FSM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	23	1	23	-1	multi-exon	FALSE	canonical	3	7	junction_6	3.14934395500694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTCCTATTTACTACT	NA	False	NA	102	True	AATAAA	-19	NA	26648495	26794643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_26648693_26721927_26722125_26725870_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776_26763984_26765727_26765869_26788602_26788728_26792388_26792451_26793000
Isoform_58847_27	chr15	-	179	1	Intergenic	novelGene_3887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATTAAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	55371284	55371105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_55371100_55371300
Isoform_58850_3	chr16	-	1947	7	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	12	654	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	30.4380062129934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGTCTTCCAAATTCT	NA	False	NA	-22	True	AATACA	-15	NA	35184173	35133779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35183844
Isoform_58851_157	chr16	-	1648	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	66	2278	0	655	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTCTTCCAAATTCTT	NA	False	NA	-21	True	AATACA	-16	NA	35184222	35133778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
Isoform_58856_3	chr16	-	1448	6	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	0	654	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	33.9611542795589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGTCTTCCAAATTCT	NA	False	NA	-22	True	AATACA	-15	NA	35184222	35133779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35184193
Isoform_58857_7	chr16	-	1304	5	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	-15	655	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	36.3077126792642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTCTTCCAAATTCTT	NA	False	NA	-21	True	AATACA	-16	NA	35184237	35133778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_35134658_35139173_35139240_35149867_35149984_35181930_35182130_35184193
Isoform_58858_3	chr16	-	1371	5	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	-4	667	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	36.3077126792642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTATCATTTGGGTA	NA	False	NA	-9	True	AATACA	-28	NA	35184292	35133766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_35134658_35139173_35139240_35149867_35149984_35181930_35182130_35184193
Isoform_58859_3	chr16	-	1186	4	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	-15	653	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.2626483512709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGGTCTTCCAAATTC	NA	False	NA	-23	True	AATACA	-14	NA	35184237	35133780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_35134658_35139173_35139240_35181930_35182130_35184193
Isoform_5886_5	chr10	+	499	2	ISM	ENSMUSG00000019889.11	ENSMUST00000219761.2	1464	3	-164	58373	-8	-58373	5prime_fragment	FALSE	canonical	3	171	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	27950841	28082296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_27951174_28082129
Isoform_58860_5	chr16	-	1577	6	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	0	650	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	31.931175988366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATTGTGGTCTTCCAAA	NA	False	NA	-26	True	AATACA	-11	NA	35184222	35133783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_35134658_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
Isoform_58861_13	chr16	-	1800	17	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_5	137.923835412883	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGTAGAGTATGTTT	NA	False	NA	-10	True	AATAAA	-14	NA	35311253	35217681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230806_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
Isoform_58867_1157	chr16	-	1819	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	-6	-4	-6	4	multi-exon	FALSE	canonical	3	428	junction_7	56.9566378374812	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGAGTATGTTTTCAC	NA	False	NA	-6	True	AATAAA	-18	NA	35311249	35217677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
Isoform_5887_7	chr10	+	1621	3	FSM	ENSMUSG00000019889.11	ENSMUST00000219761.2	1464	3	-163	6	-7	-6	multi-exon	FALSE	canonical	3	159	junction_2	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTTTCCTGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	27950842	28140663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_27951174_28082129_28082253_28139496
Isoform_58871_389	chr16	-	2088	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-12	3319	-12	167	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTACTTTTAACCAGGT	NA	False	NA	-13	True	AATAAA	-17	NA	35589738	35517750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
Isoform_58872_51	chr16	-	2512	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-10	2893	-10	593	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGATTTTTGCCAATACC	NA	False	NA	-3	True	AATATA	-34	NA	35589736	35517324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
Isoform_58873_23	chr16	-	2254	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-168	3309	-168	177	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGTTGGAAGCCTT	NA	False	NA	-3	True	AATAAA	-27	NA	35589894	35517740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
Isoform_58874_33	chr16	-	2561	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-10	2844	-10	642	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	46	True	TATAAA	-14	NA	35589736	35517275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
Isoform_58876_15	chr16	-	5237	5	FSM	ENSMUSG00000049502.18	ENSMUST00000081933.14	5309	5	66	6	66	-6	multi-exon	FALSE	canonical	3	12	junction_3	7.25861557047899	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGACTGTGTGGTTTCCC	9917	False	NA	0	True	AATAAA	-18	NA	35759455	35746886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35749739_35751742_35751961_35752645_35754170_35756746_35756998_35759063
Isoform_58877_15	chr16	-	5295	5	FSM	ENSMUSG00000049502.18	ENSMUST00000081933.14	5309	5	9	5	9	-5	multi-exon	FALSE	canonical	3	12	junction_3	7.25861557047899	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGACTGTGTGGTTTCCCT	10003	False	NA	1	True	AATAAA	-19	NA	35759512	35746885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35749739_35751742_35751961_35752645_35754170_35756746_35756998_35759063
Isoform_58880_5	chr16	-	2633	3	FSM	ENSMUSG00000049502.18	ENSMUST00000114885.3	2649	3	16	0	16	0	multi-exon	FALSE	canonical	3	12	junction_1	10	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTCATGTCTTTTTA	10010	False	NA	NA	False	NA	NA	NA	35759505	35752229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35754170_35756746_35756998_35759063
Isoform_58885_428	chr16	-	670	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-42	90	37	-4	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGACTTGTCTTTGTT	NA	False	NA	-10	True	AATACA	-9	NA	35891927	35864220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
Isoform_58887_21	chr16	-	855	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-227	90	-148	-4	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGACTTGTCTTTGTT	NA	False	NA	-10	True	AATACA	-9	NA	35892112	35864220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
Isoform_58888_3	chr16	-	3687	3	NIC	ENSMUSG00000022838.15	novel	1030	6	NA	NA	-30	-11027	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8170	False	NA	NA	False	NA	NA	NA	36648653	36625213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_36628523_36630833_36630971_36648412
Isoform_5889_10	chr10	+	4807	31	NIC	ENSMUSG00000019889.11	novel	6177	32	NA	NA	2	81	combination_of_known_splicesites	FALSE	canonical	3	10	junction_16	47.0358728348197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGAGCATCCACATTTC	NA	False	NA	39	True	AATAAA	-27	NA	27950817	28472043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28438102_28438139_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_58893_32	chr16	-	3161	5	NNC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	75	-11	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	117.992584512757	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGACTAAAGAGGTGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	37360063	37330162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37359838
Isoform_58895_494	chr16	-	3072	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	1	11	1	-11	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGACTAAAGAGGTGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	37360150	37330162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
Isoform_5890_170	chr10	+	4736	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-7	71	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGACTGTATGAGAGCA	NA	False	NA	29	True	AATAAA	-17	NA	27950842	28472033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_58903_2232	chr16	-	451	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	87	433	0	-2	multi-exon	FALSE	canonical	3	6062	junction_1	348	2232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTTTCTTTTTCTTGG	NA	False	NA	-4	True	AATAAA	-21	NA	37474728	37467964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_37468082_37469375_37469523_37474541
Isoform_58904_25	chr16	-	523	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	15	433	15	-2	multi-exon	FALSE	canonical	3	6062	junction_1	348	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTTTCTTTTTCTTGG	NA	False	NA	-4	True	AATAAA	-21	NA	37474800	37467964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_37468082_37469375_37469523_37474541
Isoform_58907_3	chr16	-	1223	7	NNC	ENSMUSG00000022809.5	novel	2553	9	NA	NA	40685	-693	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	2.28521820013368	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATTCTCAGGTGTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	38074501	38069377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_38069752_38071134_38071241_38071489_38071607_38071755_38071899_38073189_38073465_38074101_38074290_38074481
Isoform_58908_10	chr16	-	1139	4	ISM	ENSMUSG00000022805.18	ENSMUST00000023501.16	3048	17	37013	-4	36682	4	3prime_fragment	FALSE	canonical	3	28	junction_1	8.01387685344754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTTTGTAAAGCTTTTT	NA	False	NA	1	True	AATAAA	-20	NA	38125492	38118111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140
Isoform_5891_9	chr10	+	4869	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-94	83	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCATCCACATTTCAT	NA	False	NA	41	True	AATAAA	-29	NA	27950721	28472045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_58911_15	chr16	-	1540	8	NNC	ENSMUSG00000022805.18	novel	3048	17	NA	NA	23134	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	14.2571142284282	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGTTGTTTGTAAAGCT	NA	False	NA	-3	True	AATAAA	-16	NA	38139040	38118115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140_38125363_38127077_38127225_38128443_38128516_38131353_38131471_38138841
Isoform_58912_3	chr16	-	2012	10	ISM	ENSMUSG00000022805.18	ENSMUST00000023501.16	3048	17	17666	-4	17335	4	3prime_fragment	FALSE	canonical	1	2	junction_7	16.0215903712675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTTTGTAAAGCTTTTT	NA	False	NA	1	True	AATAAA	-20	NA	38144839	38118111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140_38125363_38127077_38127225_38128443_38128516_38131353_38131471_38140610_38140754_38141732_38141916_38144498
Isoform_58913_4	chr16	-	2094	9	FSM	ENSMUSG00000022805.18	ENSMUST00000114740.3	2529	9	-41	476	-41	-476	multi-exon	FALSE	canonical	0	0	junction_4	3.3166247903554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	38162215	38143018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38144022_38144498_38144657_38148569_38148748_38152529_38152712_38153115_38153173_38154103_38154188_38155865_38156024_38156705_38156783_38162018
Isoform_58914_23	chr16	-	879	5	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10108	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	83.929658047677	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCATTTTGGTTGTTTTG	NA	False	NA	-6	True	AATAAA	-17	NA	38228048	38216481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_38216898_38217700_38217866_38221233_38221347_38225898_38225989_38227953
Isoform_58915_141	chr16	-	916	5	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	25420	1	10069	-1	3prime_fragment	FALSE	canonical	3	158	junction_2	28.8823042709546	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTTTGGTTGTTTTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	38228087	38216479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953
Isoform_58918_4	chr16	-	1522	10	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	2089	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	86.1821212589442	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTTTGGTTGTTTTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	38236067	38216479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38235974
Isoform_58919_9	chr16	-	1742	11	FSM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	231	1	231	-1	multi-exon	FALSE	canonical	2	3	junction_9	86.6256313108309	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTTTGGTTGTTTTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	38253276	38216479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38253165
Isoform_5892_55	chr10	+	4762	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	2	72	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGACTGTATGAGAGCAT	NA	False	NA	30	True	AATAAA	-18	NA	27950817	28472034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_58920_3	chr16	-	1712	4	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10077	-4	intron_retention	FALSE	canonical	3	14	junction_1	96.5965262775473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTTTGGTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	38228079	38216482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_38217866_38221233_38221347_38225898_38225989_38227953
Isoform_58921_4	chr16	-	1729	4	NIC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10056	-4	intron_retention	FALSE	canonical	3	158	junction_1	29.1699998095456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTTTGGTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	38228100	38216482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_38217866_38221237_38221347_38225898_38225989_38227953
Isoform_58932_2620	chr16	-	1554	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	35	1377	14	-1377	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	2620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTTGTCTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	38273030	38265768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
Isoform_58933_90	chr16	-	1635	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	-46	1377	-46	-1377	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTTGTCTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	38273111	38265768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
Isoform_58934_41	chr16	-	2925	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	41	0	20	0	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTGGAGACCTTT	NA	False	NA	NA	False	NA	NA	NA	38273024	38264391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
Isoform_58942_13	chr16	-	2088	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	-12	-503	-12	503	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTGCTCAGTTTTAAA	NA	False	NA	-1	True	ATTAAA	-19	NA	38343037	38318205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
Isoform_58944_174	chr16	-	1554	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	35	-16	13	16	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAATCATGCCTCAGTCT	NA	False	NA	0	True	AGTAAA	-38	NA	38342990	38318692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
Isoform_58946_71	chr16	-	2312	16	Fusion	ENSMUSG00000002846.10_ENSMUSG00000034064.15	novel	1573	7	NA	NA	31	16	multi-exon	FALSE	canonical	3	59	junction_6	371.529176362892	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAATCATGCCTCAGTCT	6297	False	NA	0	True	AGTAAA	-38	NA	38370553	38318692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_5895_30	chr10	+	6018	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-7	-78	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTACTGATTGAACATC	NA	False	NA	16	True	AATAAA	-16	NA	27950842	28473315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_58954_6	chr16	-	696	3	FSM	ENSMUSG00000002846.10	ENSMUST00000147543.2	678	3	-17	-1	5	1	multi-exon	FALSE	canonical	3	26	junction_1	91	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATTTTAGTATTTAATA	NA	False	NA	-3	True	ATTAAA	-20	NA	38343020	38337020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38337233_38338728_38338895_38342702
Isoform_58965_35	chr16	-	3338	10	ISM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	31	-1	31	1	intron_retention	FALSE	canonical	3	921	junction_4	40.8985495833861	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGGCTCCTCATTTA	6297	False	NA	-3	True	NA	NA	NA	38370553	38345500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
Isoform_5897_9	chr10	+	6041	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	2	-80	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTTACTGATTGAACA	NA	False	NA	14	True	AATAAA	-14	NA	27950817	28473313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_58976_913	chr16	-	2691	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	66	1	30	-1	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGGCTCCTCATTTAC	6296	False	NA	-2	True	NA	NA	NA	38370554	38345499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_58978_383	chr16	-	2766	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	67	-75	31	75	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGTACTTGGTGAGC	6297	False	NA	-3	True	AATATA	-22	NA	38370553	38345423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_58980_28	chr16	-	2760	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	-9	7	-9	-4	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTAACCATTGGCTCCTC	6221	False	NA	-8	True	NA	NA	NA	38370629	38345505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_58987_88	chr16	-	2970	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	31	-79	31	76	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGTACTTGGTGAGCC	6297	False	NA	-2	True	AATATA	-23	NA	38370553	38345422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
Isoform_58988_237	chr16	-	2893	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	31	-2	31	-1	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGGCTCCTCATTTAC	6297	False	NA	-2	True	NA	NA	NA	38370553	38345499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
Isoform_5899_33	chr10	+	4741	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-5	81	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_13	36.8965194972466	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGAGCATCCACATTTC	NA	False	NA	39	True	AATAAA	-27	NA	27950844	28472043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_58997_4	chr16	-	3880	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	2	29	junction_3	44.7576809050692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCCGCTGTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	43710017	43681776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691141_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
Isoform_58998_5	chr16	-	3847	9	FSM	ENSMUSG00000022704.17	ENSMUST00000156568.8	3856	9	2	7	2	-7	multi-exon	FALSE	canonical	2	29	junction_3	36.5299534628776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCCGCTGTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	43710009	43681776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_43683665_43687772_43687891_43689308_43689461_43691141_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
Isoform_59001_4	chr16	-	3187	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	52.4541466425677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710020	43681769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701191_43701577_43709929
Isoform_59002_94	chr16	-	3038	9	NIC	ENSMUSG00000022704.17	novel	1457	9	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	44.3163344603319	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCCGCTGTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	43710017	43681776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
Isoform_59003_130	chr16	-	3013	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	35.9374456521328	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCCGCTGTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	43710017	43681776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
Isoform_59004_57	chr16	-	3040	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	4	-7	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	35.9374456521328	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCCGCTGTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	43710044	43681776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
Isoform_59009_7	chr16	-	5829	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	20.1183995387307	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	43800146	43785399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_43789777_43791761_43791921_43793830_43794530_43799270_43799540_43799821
Isoform_5901_9	chr10	+	6026	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-17	-77	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_13	36.8965194972466	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTACTGATTGAACATCA	NA	False	NA	17	True	AATAAA	-17	NA	27950832	28473316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_59010_4	chr16	-	5555	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	18.004443895883	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800157	43785395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_43789777_43791761_43791921_43793830_43794141_43794429_43794530_43799270_43799540_43799821
Isoform_59012_5	chr16	-	5602	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	19.6897816138219	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	43800170	43785399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43799982
Isoform_59013_15	chr16	-	5701	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	10.9857862713599	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	43800170	43785399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799982
Isoform_59015_7	chr16	-	5860	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	11.6054943884352	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGTGGTTGTTGG	NA	False	NA	-4	True	AATAAA	-17	NA	43800167	43785398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799821
Isoform_59016_19	chr16	-	5415	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.4995237987254	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGTGGTTGTTGG	NA	False	NA	-4	True	AATAAA	-17	NA	43800172	43785398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799982
Isoform_59017_7	chr16	-	5590	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-32	-3	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	10.9544511501033	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGTGGTTGTTGG	NA	False	NA	-4	True	AATAAA	-17	NA	43800186	43785398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799821
Isoform_59018_3	chr16	-	3500	17	NNC	ENSMUSG00000036292.15	novel	2046	18	NA	NA	-12222	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.23519434278096	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGTCGTTTTTTCTTCT	1450	False	NA	NA	False	AATAAA	-14	NA	43860530	43800719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_43800998_43801022_43802502_43803503_43803610_43803870_43803982_43807284_43807343_43808443_43808621_43810130_43810235_43810985_43811129_43812421_43812541_43818088_43818227_43825822_43825986_43829767_43829901_43833284_43833401_43849041_43849123_43850656_43850753_43851342_43851447_43860436
Isoform_59046_169	chr16	-	3954	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	179	-237	1	-6	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAACTTTTCTTTCCCTT	NA	False	NA	-6	True	AATAAA	-12	NA	43959380	43905770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
Isoform_5905_6	chr10	+	1846	6	FSM	ENSMUSG00000019883.12	ENSMUST00000160399.8	1845	6	0	-1	0	1	multi-exon	FALSE	canonical	3	12	junction_1	32.6643536596088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATGTCCATTCCAGA	NA	False	NA	3	True	AATAGA	-14	NA	29189161	29221557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_29189294_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
Isoform_59051_50	chr16	-	3983	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	154	-241	-24	-2	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43959405	43905766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
Isoform_59057_553	chr16	-	3944	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	288	2	1	-2	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43959380	43905766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
Isoform_59058_89	chr16	-	3986	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	246	2	-41	-2	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43959422	43905766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
Isoform_59063_23	chr16	-	4231	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	-3	6	-3	-6	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAACTTTTCTTTCCCTT	NA	False	NA	-6	True	AATAAA	-12	NA	43959671	43905770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
Isoform_59076_3	chr16	-	4450	19	FSM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	6	-5	6	5	multi-exon	FALSE	canonical	2	4	junction_3	3.24132269906996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGAGTGAGTCAGCGTT	NA	False	NA	0	True	AATAAA	-31	NA	44379254	44305406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
Isoform_59077_7	chr16	-	4459	19	NNC	ENSMUSG00000022687.13	novel	4451	19	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	2.77332977207749	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACGAGTGAGTCAGCGT	NA	False	NA	-1	True	AATAAA	-30	NA	44379267	44305407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_44306163_44307074_44307266_44307712_44307790_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
Isoform_59078_4	chr16	-	4469	19	NNC	ENSMUSG00000022687.13	novel	4451	19	NA	NA	-15	3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	3.04138126514911	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCACGAGTGAGTCAGCG	NA	False	NA	-2	True	AATAAA	-29	NA	44379275	44305408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_44306163_44307074_44307266_44307712_44307790_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313339_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
Isoform_59079_4	chr16	-	1180	6	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	14	45	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	40.3187301387333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGCTAGCTGGCTTTT	NA	False	NA	-27	True	ATTAAA	-18	NA	44566708	44559459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565645_44565857_44566361
Isoform_59081_35	chr16	-	1073	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	16	2326	12	48	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAGCTGGCTTTTCTA	NA	False	NA	-24	True	ATTAAA	-21	NA	44566710	44559456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
Isoform_59082_13	chr16	-	1180	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	17	2218	13	156	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTCTACTGTCTTCA	NA	False	NA	84	True	TATAAA	-29	NA	44566709	44559348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
Isoform_59084_4	chr16	-	1287	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	17	2111	13	263	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTTCTTCTAGTATTT	NA	False	NA	NA	False	AATAGA	-22	NA	44566709	44559241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
Isoform_59085_3	chr16	-	871	6	FSM	ENSMUSG00000022668.11	ENSMUST00000023348.11	836	6	12	-47	12	47	multi-exon	FALSE	canonical	3	17	junction_5	38.0473389345431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTAGCTGGCTTTTCT	NA	False	NA	-25	True	ATTAAA	-20	NA	44566710	44559457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566562
Isoform_59086_3	chr16	-	937	5	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	12	43	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	47.3675785743793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGATGCTAGCTGGCTT	NA	False	NA	-29	True	ATTAAA	-16	NA	44566710	44559461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_44559732_44560391_44560511_44562866_44562967_44565757_44565857_44566361
Isoform_59088_76	chr16	-	2947	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	47	1239	-4	1134	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAATCTGTACTATGT	NA	False	NA	-12	True	ATTAAA	-18	NA	44979022	44961174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
Isoform_59090_8	chr16	-	3391	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	37	805	-14	-805	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTATTTTAGAAGCAT	NA	False	NA	NA	False	AATAAA	-17	NA	44979032	44960740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
Isoform_59092_4	chr16	-	4136	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	48	49	-3	-49	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGATTTGTGAACTTATT	NA	False	NA	NA	False	ATTAAA	-14	NA	44979021	44959984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
Isoform_59093_23	chr16	-	2317	6	FSM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	37	-7	1	7	multi-exon	FALSE	canonical	3	12	junction_1	7.98498591107085	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTTCTCTATGC	NA	False	NA	NA	False	AATAAA	-14	NA	45229379	45202490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45220584_45220667_45229218
Isoform_59095_9	chr16	-	2242	5	NIC	ENSMUSG00000022661.15	novel	2347	6	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	11.6270159542335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTTCTCTATGC	NA	False	NA	NA	False	AATAAA	-14	NA	45229386	45202490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45229218
Isoform_59097_52	chr16	-	1046	4	FSM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	194	0	194	0	multi-exon	FALSE	canonical	3	70	junction_1	1.63299316185545	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAGTATAACTTTATT	NA	False	NA	-9	True	AATAAA	-15	NA	45544777	45531592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45532073_45533294_45533398_45543285_45543461_45544489
Isoform_591_1241	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	1	-1	1	1	multi-exon	FALSE	canonical	3	5391	junction_1	17	1241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTTGTATGGCGGAC	NA	False	NA	NA	False	NA	NA	NA	1981	999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_-_1168_1532_1765_1902
Isoform_5910_35	chr10	+	2269	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	67	1520	67	389	multi-exon	FALSE	canonical	3	81	junction_5	6.04648658313239	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCACGACCTATGGATC	NA	False	NA	10	True	AATAAA	-26	NA	29189562	29221945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
Isoform_59102_10	chr16	-	1251	6	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-11	176	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	144.088028649156	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTTTGCCTTTCTTA	NA	False	NA	-30	True	ATTAAA	-22	NA	45563329	45551737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_59103_4	chr16	-	2667	5	FSM	ENSMUSG00000033157.18	ENSMUST00000128348.3	827	5	-19	-1821	-14	-5	multi-exon	FALSE	canonical	3	25	junction_2	130.370625525845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGTATGGTGAGTCC	NA	False	NA	-10	True	NA	NA	NA	45563284	45550092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45563139
Isoform_59104_51	chr16	-	2800	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	43	5	-5	-5	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGTATGGTGAGTCC	NA	False	NA	-10	True	NA	NA	NA	45563275	45550092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_59106_96	chr16	-	1154	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	43	1651	-5	175	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATGTTTGCCTTTCTT	NA	False	NA	-31	True	ATTAAA	-21	NA	45563275	45551738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_59107_20	chr16	-	1204	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-7	1651	-7	175	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATGTTTGCCTTTCTT	NA	False	NA	-31	True	ATTAAA	-21	NA	45563325	45551738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_59111_7	chr16	-	1297	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-18	1569	-18	257	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTGTCTGGTACCAT	NA	False	NA	-8	True	AATAAA	-13	NA	45563336	45551656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_59113_7	chr16	-	2851	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-8	5	-8	-5	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGTATGGTGAGTCC	NA	False	NA	-10	True	NA	NA	NA	45563326	45550092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_59114_35	chr16	-	2620	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGAGTCCTGTGCATT	NA	False	NA	-2	True	NA	NA	NA	45563271	45550084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
Isoform_59121_6	chr16	-	2672	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGAGTCCTGTGCATTC	NA	False	NA	-1	True	NA	NA	NA	45563322	45550083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
Isoform_59123_54	chr16	-	5477	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	17	-11	17	11	multi-exon	TRUE	canonical	3	48	junction_15	7.72315083521806	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTTCTCCTCTCTCTC	NA	False	NA	1	True	ATTAAA	-24	NA	45664724	45566594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
Isoform_59128_4	chr16	-	3788	16	ISM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	15	5008	15	-4091	5prime_fragment	FALSE	canonical	3	48	junction_13	8.2138095100061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTATCTGAACCTAG	NA	False	NA	NA	False	AATAAA	-11	NA	45664726	45571613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
Isoform_59131_7	chr16	-	2494	2	ISM	ENSMUSG00000033149.18	ENSMUST00000076333.12	5347	19	-136	77371	8	2040	5prime_fragment	FALSE	canonical	3	73	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTCAATCGTGGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	45664733	45644127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_45646459_45664570
Isoform_59132_7	chr16	-	1749	7	FSM	ENSMUSG00000022656.16	ENSMUST00000096052.9	1746	7	-160	157	-45	-157	multi-exon	FALSE	canonical	3	13	junction_2	112.29784305834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTTGTGTTAATTTTT	NA	False	NA	0	True	AATAAA	-17	NA	46317375	46256498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_46256802_46258292_46258432_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
Isoform_59134_207	chr16	-	3066	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	2	-6	2	6	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGGGGGTTTATTTT	NA	False	NA	-1	True	ATTAAA	-19	NA	46317328	46267525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
Isoform_59137_39	chr16	-	7504	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	2	-4444	2	4444	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTGGTTTTTAGACT	NA	False	NA	-8	True	TTTAAA	-25	NA	46317328	46263087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
Isoform_5914_371	chr10	+	835	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	23	0	1	0	multi-exon	FALSE	canonical	3	475	junction_4	15.6025638918737	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTCTTCTGTTTTGC	NA	False	NA	20	True	ATTAAA	-27	NA	31189401	31204200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
Isoform_59141_14	chr16	-	3249	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-182	-5	-182	5	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGGGGGTTTATTT	NA	False	NA	-2	True	ATTAAA	-18	NA	46317512	46267526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
Isoform_59148_55	chr16	-	5595	32	FSM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	223	2	-1	0	multi-exon	FALSE	canonical	3	63	junction_19	19.7691147506127	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4420	False	NA	-9	True	AATAAA	-16	NA	48814305	48744596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_59150_8	chr16	-	5745	32	FSM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	74	1	74	-1	multi-exon	FALSE	canonical	3	63	junction_19	19.7691147506127	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTATTTCTTTATGTAT	4271	False	NA	-8	True	AATAAA	-17	NA	48814454	48744595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_59152_31	chr16	-	4978	31	FSM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	-1	-1646	-1	-1	multi-exon	FALSE	canonical	3	44	junction_18	21.5464614264152	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTATTTCTTTATGTAT	4420	False	NA	-8	True	AATAAA	-17	NA	48814305	48744595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_59153_5	chr16	-	5132	31	FSM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	-156	-1645	68	0	multi-exon	FALSE	canonical	3	44	junction_18	21.5464614264152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4265	False	NA	-9	True	AATAAA	-16	NA	48814460	48744596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_59154_43	chr16	-	6838	32	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	21.2442316342938	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4420	False	NA	-9	True	AATAAA	-16	NA	48814305	48744596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_59156_4	chr16	-	6374	31	NIC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	69	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	22.9540846038347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4266	False	NA	-9	True	AATAAA	-16	NA	48814459	48744596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_59157_26	chr16	-	6221	31	NIC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	22.9540846038347	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTATTTCTTTATGTAT	4420	False	NA	-8	True	AATAAA	-17	NA	48814305	48744595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_5916_2058	chr10	+	2001	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	4	0	4	0	multi-exon	TRUE	canonical	3	1084	junction_4	88.4199902429095	2058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTGTCTGTTTATT	NA	False	NA	14	True	ATTAAA	-15	NA	36850543	36877885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
Isoform_59163_3	chr16	-	2447	13	ISM	ENSMUSG00000022641.16	ENSMUST00000089399.11	2539	14	-20	10022	-4	-1943	5prime_fragment	FALSE	canonical	1	5	junction_11	3.66192875711997	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAGAAGAAGACTGG	9710	False	NA	NA	False	AATATA	-39	NA	50252757	50040862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
Isoform_59167_13	chr16	-	3627	12	FSM	ENSMUSG00000035356.18	ENSMUST00000114458.8	3627	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.64418901313618	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCTTTTCTAGTGCC	NA	False	NA	-10	True	AATAAA	-17	NA	55642501	55631737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55633147_55634312_55634481_55634603_55634715_55636002_55636173_55636430_55636495_55636679_55636827_55637193_55637300_55638091_55638898_55639110_55639215_55639354_55639386_55639929_55640070_55642130
Isoform_59168_14	chr16	-	5471	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	34	2406	12	-2406	multi-exon	TRUE	canonical	3	23	junction_5	7.29383301152419	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55755184	55722656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
Isoform_59169_29	chr16	-	2849	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	0	5062	0	1	multi-exon	FALSE	canonical	3	23	junction_5	7.29383301152419	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTACACCAATAATGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	55755218	55725312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
Isoform_59174_55	chr16	-	2357	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGGTCTTATTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	55850043	55835871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
Isoform_59177_185	chr16	-	2183	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	16	1	-4	-1	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850043	55835869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
Isoform_59178_75	chr16	-	2208	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	-9	1	1	-1	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850068	55835869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
Isoform_59186_1112	chr16	-	2235	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	59	1	-4	-1	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850043	55835869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
Isoform_59188_45	chr16	-	2293	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	1	1	1	-1	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850101	55835869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
Isoform_59197_324	chr16	-	2441	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-11	-1492	-1	-1	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850050	55835869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
Isoform_592_627	SIRV3	-	590	3	FSM	SIRV3C	SIRV310	589	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1245	junction_2	66	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGTTTTGGGTACTG	NA	False	NA	NA	False	NA	NA	NA	9914	8758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_-_8967_9189_9325_9667
Isoform_59203_27	chr16	-	634	4	FSM	ENSMUSG00000071533.12	ENSMUST00000122253.2	792	4	-10	168	0	-168	multi-exon	FALSE	canonical	3	1778	junction_3	312.848206004126	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGTACACACGTGCAC	NA	False	NA	NA	False	AATAAA	-24	NA	55850069	55838650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55838891_55842417_55842493_55844586_55844802_55849965
Isoform_59204_610	chr16	-	1866	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	27	1109	27	-1109	multi-exon	FALSE	canonical	3	404	junction_1	0	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGATTCTTTGAATATCAGA	7413	False	NA	-3	True	AATAAA	-23	NA	55858155	55854080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55855655_55857863
Isoform_59205_20	chr16	-	2290	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	45	667	45	-667	multi-exon	FALSE	canonical	3	404	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGTGTCTGGACCAG	7431	False	NA	NA	False	AATAAA	-17	NA	55858137	55853638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55855655_55857863
Isoform_59210_11	chr16	-	1933	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537814	56510695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_59211_30	chr16	-	1863	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537744	56510695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_59212_53	chr16	-	1778	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537659	56510695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_59216_86	chr16	-	1945	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	-1	1	-1	-1	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537814	56510695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_59217_336	chr16	-	1806	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	138	1	-1	-1	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537675	56510695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_59218_224	chr16	-	1877	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	67	1	-23	-1	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537746	56510695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_59223_399	chr16	-	1082	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-21	225	-12	-85	multi-exon	FALSE	canonical	3	674	junction_8	39.9499687108764	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTAGCTCTTAACTAG	NA	False	NA	-14	True	ATTAAA	-35	NA	56987716	56977252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
Isoform_59224_162	chr16	-	1303	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-21	4	-12	-3	multi-exon	TRUE	canonical	3	674	junction_8	39.9499687108764	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATTTTGATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	56987716	56977031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
Isoform_59227_27	chr16	-	2021	4	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	3683	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	80.5536398239638	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	56994936	56989224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56994825
Isoform_59228_18	chr16	-	3490	18	NIC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-19	-3	combination_of_known_junctions	TRUE	canonical	3	26	junction_15	37.195732165794	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGCCCTGGAGGAT	NA	False	NA	-7	True	AATAAA	-19	NA	57051755	56989227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032854_57034526_57034633_57038671_57038784_57051676
Isoform_59231_315	chr16	-	3575	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	112	3	-19	-3	multi-exon	FALSE	canonical	3	134	junction_12	18.4520326427881	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGCCCTGGAGGAT	NA	False	NA	-7	True	AATAAA	-19	NA	57051755	56989227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
Isoform_59232_30	chr16	-	3662	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	25	3	25	-3	multi-exon	FALSE	canonical	3	134	junction_12	18.4520326427881	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGCCCTGGAGGAT	NA	False	NA	-7	True	AATAAA	-19	NA	57051842	56989227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
Isoform_59233_24	chr16	-	3712	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	-25	3	-25	-3	multi-exon	FALSE	canonical	3	134	junction_12	18.4520326427881	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGCCCTGGAGGAT	NA	False	NA	-7	True	AATAAA	-19	NA	57051892	56989227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
Isoform_59236_217	chr16	-	1172	10	FSM	ENSMUSG00000022748.9	ENSMUST00000114371.5	1150	10	-21	-1	-3	1	multi-exon	TRUE	canonical	3	200	junction_5	24.152805731247	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTTTCTCTTTCCCCTC	NA	False	NA	-8	True	AATAAA	-33	NA	57427230	57122361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826_57143907_57427028
Isoform_59238_8	chr16	-	1788	2	FSM	ENSMUSG00000022748.9	ENSMUST00000231282.2	610	2	-77	-1101	-7	1101	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57427216	57263754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_57265355_57427028
Isoform_59239_23	chr16	-	529	2	FSM	ENSMUSG00000022748.9	ENSMUST00000232413.2	529	2	-3	3	-3	-3	multi-exon	FALSE	canonical	3	94	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTATTTATGTTTTGT	NA	False	NA	-4	True	AATAAA	-14	NA	57427230	57381798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_57382126_57427028
Isoform_59242_8	chr16	-	1581	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	-261	376	-37	3	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTAGAGTGTTCTGTTC	NA	False	NA	NA	False	AATAAA	-13	NA	59459791	59433687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
Isoform_59243_114	chr16	-	1311	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	12	373	12	6	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGAGTGTTCTGTTCATG	NA	False	NA	NA	False	AATAAA	-16	NA	59459518	59433684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
Isoform_59245_4	chr16	-	1680	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	11	5	11	-5	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACTTATTTTTATCCT	NA	False	NA	NA	False	AATAAA	-16	NA	59459519	59433316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
Isoform_59246_3	chr16	-	1016	7	ISM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	12	5618	12	2652	5prime_fragment	FALSE	canonical	3	88	junction_4	10.7341614587364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTATGGACCCAGATT	NA	False	NA	NA	False	AATAAA	-24	NA	59459518	59438929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
Isoform_59247_3	chr16	-	3612	7	NIC	ENSMUSG00000050312.13	novel	3565	6	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_4	12.3917535302941	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607149	62552806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_62555782_62589969_62590092_62591020_62591176_62592061_62592100_62596650_62596747_62606150_62606261_62607033
Isoform_59248_15	chr16	-	3552	6	FSM	ENSMUSG00000050312.13	ENSMUST00000143314.8	3565	6	13	0	2	0	multi-exon	TRUE	canonical	3	19	junction_4	5.49181208709839	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607127	62552806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596747_62606150_62606261_62607033
Isoform_59249_28	chr16	-	3803	6	FSM	ENSMUSG00000050312.13	ENSMUST00000063089.12	3813	6	10	0	-1	0	multi-exon	FALSE	canonical	3	18	junction_4	5.74804314527997	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607130	62552806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596995_62606150_62606261_62607033
Isoform_59250_36	chr16	-	3497	10	FSM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	34	-3	-13	3	multi-exon	FALSE	canonical	3	30	junction_2	10.3494497975067	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATCTAATTTTAAAAGAT	NA	False	NA	NA	False	AATAAA	-21	NA	62667369	62614044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_62616072_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
Isoform_59255_28	chr16	-	3423	9	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	12.6830349285965	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATTTATCTAATTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	62667369	62614049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_62616072_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
Isoform_59257_10	chr16	-	1081	6	ISM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	11	12857	11	5308	5prime_fragment	FALSE	canonical	3	47	junction_5	7.11617874986288	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAGTTGTGGCAAGTGG	NA	False	NA	NA	False	NA	NA	NA	62667392	62626904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
Isoform_59258_161	chr16	-	1329	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	225	3968	225	-3968	multi-exon	FALSE	canonical	3	170	junction_1	18.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTGTGTGCCTTAGAA	NA	False	NA	-18	True	AATAAA	-20	NA	64591299	64586466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_64587357_64589286_64589526_64591099
Isoform_59262_31	chr16	-	5319	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	203	0	203	0	multi-exon	FALSE	canonical	3	170	junction_1	18.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCTTATATTTTAAAGAA	NA	False	NA	NA	False	AATAAA	-39	NA	64591321	64582498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_64587357_64589286_64589526_64591099
Isoform_59264_4	chr16	-	4518	4	NNC	ENSMUSG00000059920.10	novel	5522	3	NA	NA	202	-768	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	90.1344674484862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTTTTAGGGTTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	64591322	64583266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_64584706_64584739_64587357_64589286_64589526_64591099
Isoform_59266_91	chr16	-	3829	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-73	2505	-73	-2501	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTTGTTTTCTTGTCC	NA	False	NA	-3	True	AATAAA	-21	NA	64672088	64603214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
Isoform_59267_65	chr16	-	6325	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-65	1	-65	-1	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAGTGTTCAGTTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	64672080	64600710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
Isoform_59268_19	chr16	-	3867	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-114	2508	-114	-2504	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAATTTGTTTTCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	64672129	64603217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
Isoform_59275_8	chr16	-	5270	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-116	1107	-116	-1103	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGTTCATTTGCACA	NA	False	NA	NA	False	AATAAA	-12	NA	64672131	64601816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
Isoform_59276_5	chr16	-	6376	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-116	1	-116	-1	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAGTGTTCAGTTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	64672131	64600710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
Isoform_59280_170	chr16	-	1840	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	30	2	30	-2	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGCCTAACGCGCAT	NA	False	NA	-10	True	AATAAA	-17	NA	65359582	65336015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
Isoform_59286_95	chr16	-	4019	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	46	172	7	-172	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATATTGTTTTCTATCTT	4027	False	NA	-2	True	AATAAA	-21	NA	75563663	75552081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
Isoform_5930_5	chr10	+	2519	15	ISM	ENSMUSG00000019846.12	ENSMUST00000019992.6	6046	38	21	48673	-17	3848	5prime_fragment	FALSE	canonical	0	0	junction_6	2.71052370871575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTAAGCTTGAGGAAT	NA	False	NA	NA	False	AATAAA	-12	NA	38841531	38937511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349
Isoform_59302_4	chr16	-	8032	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	-46	-3457	-46	-5	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTTGTCCTAAGATTT	NA	False	NA	NA	False	AATAAA	-15	NA	76169983	76084292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
Isoform_59304_9	chr16	-	7702	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	-41	-3132	-41	-330	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGGCTTCTTTTTTGT	NA	False	NA	-2	True	AATAAA	-24	NA	76169978	76084617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
Isoform_59306_3	chr16	-	7572	3	FSM	ENSMUSG00000048490.15	ENSMUST00000231304.2	540	3	-39	-6993	-34	-334	multi-exon	FALSE	canonical	2	16	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGAAATGGCTTCTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	76169971	76084621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_76091904_76149359_76149438_76169759
Isoform_59308_374	chr16	-	1382	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	29	3	29	-3	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTGTGGTTTTGTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	78173669	78156750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
Isoform_5931_4	chr10	+	5992	38	FSM	ENSMUSG00000019846.12	ENSMUST00000019992.6	6046	38	47	7	-8	-7	multi-exon	TRUE	canonical	0	0	junction_6	2.38481928848171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTATTTCTTATTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	38841557	38986177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890_38971081_38973078_38973235_38974322_38974483_38979483_38979615_38981132_38981227_38981957_38982078_38985883
Isoform_59313_16	chr16	-	3579	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	13	-2178	13	2178	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTTGCAGTCTATTAA	NA	False	NA	NA	False	AATAAA	-14	NA	78173685	78154569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
Isoform_59317_4	chr16	-	3052	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-137	3212	-86	-7	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	3106	False	NA	NA	False	AAGAAA	-39	NA	78373682	78340437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
Isoform_59324_31	chr16	-	1502	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	3	4622	3	1	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGGTTACTCAATCAT	3246	False	NA	-3	True	AATAAA	-14	NA	78373542	78341847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
Isoform_59326_13	chr16	-	1572	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-67	4622	-16	1	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGGTTACTCAATCAT	3176	False	NA	-3	True	AATAAA	-14	NA	78373612	78341847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
Isoform_59328_10	chr16	-	1608	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-103	4622	-52	1	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGGTTACTCAATCAT	3140	False	NA	-3	True	AATAAA	-14	NA	78373648	78341847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
Isoform_59329_31	chr16	-	6124	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	3	0	3	0	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGAGCCTCGGTTGATT	3246	False	NA	-3	True	AATAAA	-20	NA	78373542	78337225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
Isoform_5933_40	chr10	+	2638	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-19	310	-19	-310	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAATGTTTTTTGAGAC	NA	False	NA	NA	False	AATAAA	-28	NA	39009999	39026744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
Isoform_59330_9	chr16	-	6159	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-34	2	17	-2	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCGAGCCTCGGTTGA	3209	False	NA	-5	True	AATAAA	-18	NA	78373579	78337227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
Isoform_59331_4	chr16	-	6244	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-118	1	-67	-1	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGAGCCTCGGTTGAT	3125	False	NA	-4	True	AATAAA	-19	NA	78373663	78337226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
Isoform_59333_6	chr16	-	2706	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	2	-1132	2	-14	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGGGGAAAAAGAAAAAAAA	3245	False	NA	NA	False	AAGAAA	-32	NA	78373543	78340444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
Isoform_59335_12	chr16	-	1302	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	3	271	3	1	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGGTTACTCAATCAT	3246	False	NA	-3	True	AATAAA	-14	NA	78373542	78341847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
Isoform_59336_5	chr16	-	5917	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	8	-4349	-2	-2	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCGAGCCTCGGTTGA	3251	False	NA	-5	True	AATAAA	-18	NA	78373537	78337227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
Isoform_59337_6	chr16	-	1361	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	-58	273	-7	-1	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCAGGGTTACTCAATC	3185	False	NA	-5	True	AATAAA	-12	NA	78373603	78341849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
Isoform_59339_12	chr16	-	2681	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	1	-1411	1	-7	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	3244	False	NA	NA	False	AAGAAA	-39	NA	78373544	78340437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
Isoform_5934_19	chr10	+	2874	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-30	85	17	-85	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTCAAGCATTCGTT	NA	False	NA	NA	False	AAGAAA	-14	NA	39009988	39026969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
Isoform_59340_5	chr16	-	2073	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	-30	-772	21	500	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGGAGTTCCCGTAAT	3213	False	NA	-2	True	AATAAA	-19	NA	78373575	78341076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
Isoform_59341_23	chr16	-	1269	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	3	-1	3	1	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGGTTACTCAATCAT	3246	False	NA	-3	True	AATAAA	-14	NA	78373542	78341847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
Isoform_59344_12	chr16	-	5891	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	3	-4623	3	0	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGAGCCTCGGTTGATT	3246	False	NA	-3	True	AATAAA	-20	NA	78373542	78337225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
Isoform_59347_7	chr16	-	1269	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-44	1419	17	-1	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCAGGGTTACTCAATC	3209	False	NA	-5	True	AATAAA	-12	NA	78373579	78341849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
Isoform_59348_4	chr16	-	2681	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-44	7	17	-7	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	3209	False	NA	NA	False	AAGAAA	-39	NA	78373579	78340437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
Isoform_59349_12	chr16	-	1234	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-9	1419	1	-1	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCAGGGTTACTCAATC	3244	False	NA	-5	True	AATAAA	-12	NA	78373544	78341849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
Isoform_5935_3	chr10	+	3790	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-49	-812	-2	-672	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATTCAGCTTGACTTG	NA	False	NA	NA	False	NA	NA	NA	39009969	39027866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
Isoform_59350_4	chr16	-	1450	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-224	1418	-163	0	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	3029	False	NA	-4	True	AATAAA	-13	NA	78373759	78341848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
Isoform_59351_6	chr16	-	1350	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-125	1419	-64	-1	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCAGGGTTACTCAATC	3128	False	NA	-5	True	AATAAA	-12	NA	78373660	78341849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
Isoform_59352_10	chr16	-	5854	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-7	-3203	3	-2	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCGAGCCTCGGTTGA	3246	False	NA	-5	True	AATAAA	-18	NA	78373542	78337227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
Isoform_59356_8	chr16	-	5832	5	NIC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	108.368295640376	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGAGCCTCGGTTGATT	3246	False	NA	-3	True	AATAAA	-20	NA	78373542	78337225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373370
Isoform_59361_728	chr16	-	1076	10	FSM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	512	706	0	-706	multi-exon	FALSE	canonical	3	703	junction_1	110.666443551761	728	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTTTGTCCCTGCTC	NA	False	NA	NA	False	AATAAA	-14	NA	84532118	84515169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
Isoform_59373_101	chr16	-	533	5	ISM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	646	0	-25	0	3prime_fragment	FALSE	canonical	3	198	junction_4	3188.04854103572	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696
Isoform_59376_2660	chr16	-	478	4	ISM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	768	0	-25	0	3prime_fragment	FALSE	canonical	3	5740	junction_3	655.078790850553	2660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696
Isoform_59378_170	chr16	-	592	4	ISM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	654	0	34	0	3prime_fragment	FALSE	canonical	3	5740	junction_3	655.078790850553	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631859	84624758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696
Isoform_5938_11	chr10	+	2336	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-63	656	-16	305	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAATCGGGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	39009955	39026398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
Isoform_59384_68	chr16	-	3350	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	64	4753	2	0	multi-exon	FALSE	canonical	3	25	junction_10	12.3870677065552	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTTTCTTTGAAGGGTGA	7387	False	NA	-1	True	AATAAA	-24	NA	84970590	84751325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_59385_16	chr16	-	3413	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	0	4754	0	-1	multi-exon	FALSE	canonical	3	25	junction_10	12.3870677065552	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTTTGAAGGGTG	7323	False	NA	-2	True	AATAAA	-23	NA	84970654	84751326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_5939_3	chr10	+	2993	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-63	-1	-16	1	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTCTGTGTTAAGTCCC	NA	False	NA	NA	False	AATATA	-19	NA	39009955	39027055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
Isoform_59392_22	chr16	-	3280	17	FSM	ENSMUSG00000022892.12	ENSMUST00000226232.2	3120	17	41	-201	10	0	multi-exon	FALSE	canonical	3	10	junction_10	13.879925927396	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGACGTTTCTTTGAAG	7395	False	NA	-6	True	AATAAA	-19	NA	84970582	84751330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_59394_8	chr16	-	3116	16	FSM	ENSMUSG00000022892.12	ENSMUST00000005406.12	3176	16	64	-4	10	-1	multi-exon	FALSE	canonical	2	2	junction_10	15.6480740738987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTTTGAAGGGTG	7395	False	NA	-2	True	AATAAA	-23	NA	84970582	84751326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_59395_6	chr16	-	3183	16	FSM	ENSMUSG00000022892.12	ENSMUST00000005406.12	3176	16	-6	-1	2	1	multi-exon	FALSE	canonical	2	2	junction_10	15.6480740738987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGACGTTTCTTTGAAGG	7325	False	NA	-5	True	AATAAA	-20	NA	84970652	84751329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_594_993	SIRV3	-	795	3	FSM	SIRV3C	SIRV309	796	3	1	0	1	0	multi-exon	FALSE	canonical	3	1394	junction_2	16	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9942	8797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_-_8976_9189_9299_9434
Isoform_59402_98	chr16	-	6725	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	89	929	40	-929	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGTCAAAATGACTGTTA	NA	False	NA	-7	True	AATAAA	-18	NA	87229411	87174467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
Isoform_59403_43	chr16	-	7052	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	87	604	38	-604	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTGGTTCTTGACTTTG	NA	False	NA	0	True	AATAAA	-20	NA	87229413	87174142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
Isoform_59405_18	chr16	-	7656	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	87	0	38	0	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCCATTCTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	87229413	87173538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
Isoform_59411_7	chr16	-	2363	12	FSM	ENSMUSG00000052299.10	ENSMUST00000232095.2	2360	12	39	-42	39	42	multi-exon	FALSE	canonical	3	5	junction_1	51.9704302448489	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTCGGCCCTAGATACT	NA	False	NA	NA	False	AATAAA	-13	NA	87229412	87210033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_87210177_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
Isoform_59414_150	chr16	-	2012	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	-8	5	-8	-5	multi-exon	FALSE	canonical	3	39	junction_1	7.71362431027076	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTGTGCTTGTTATC	NA	False	NA	-9	True	AATAAA	-12	NA	87237469	87230299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
Isoform_59416_3	chr16	-	2110	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	-28	-73	-28	73	multi-exon	FALSE	canonical	3	39	junction_1	7.71362431027076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTGGTGTTTGTGGTTC	NA	False	NA	69	True	TATAAA	-7	NA	87237489	87230221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
Isoform_5944_51	chr10	+	3578	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-41	-9	-7	0	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39245752	39441377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_59441_6555	chr16	-	1841	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	3	550	3	112	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	6555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292758	87280763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
Isoform_59442_339	chr16	-	2387	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	3	4	3	-4	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTTAGGTGAACATAAT	NA	False	NA	-17	True	AATAAA	-24	NA	87292758	87280217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
Isoform_59446_94	chr16	-	1894	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	-51	551	-51	111	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCGTCTGTTTAATCA	NA	False	NA	-26	True	AATAAA	-12	NA	87292812	87280764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
Isoform_5945_120	chr10	+	2605	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-31	954	3	-4	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATCAGGACAGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	39245762	39440414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_59464_45	chr16	-	7343	29	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_25	9.36450092375565	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7779	False	NA	-1	True	AATAAA	-15	NA	89940724	89583998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89940572
Isoform_59465_14	chr16	-	7174	28	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_25	13.3559478999909	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7779	False	NA	-1	True	AATAAA	-15	NA	89940724	89583998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752996_89863408_89863461_89940572
Isoform_59467_23	chr16	-	4340	20	NIC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	-35	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	58.24796549893	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081348	90025840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59469_48	chr16	-	4357	20	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	23	-2	combination_of_known_junctions	FALSE	canonical	3	106	junction_9	44.5324743781235	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081368	90025840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59470_13	chr16	-	4349	20	FSM	ENSMUSG00000022983.17	ENSMUST00000232371.2	4367	20	22	-4	22	-2	multi-exon	FALSE	canonical	3	36	junction_10	57.9041619122408	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081369	90025840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59471_79	chr16	-	4300	20	FSM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	-127	2	-10	-2	multi-exon	TRUE	canonical	3	110	junction_9	44.050650776067	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081323	90025840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59475_20	chr16	-	4426	20	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	23	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	59.596240748535	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081368	90025840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59476_62	chr16	-	4423	20	FSM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	-55	-102	23	-2	multi-exon	FALSE	canonical	3	105	junction_2	46.4080420960757	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081368	90025840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59478_18	chr16	-	4415	20	NIC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	59.2634383465366	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081369	90025840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59479_71	chr16	-	4413	20	NIC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_2	45.9499908819345	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081368	90025838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59481_6	chr16	-	3228	19	ISM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	-152	13381	-35	6	5prime_fragment	FALSE	canonical	3	110	junction_8	43.9576465630045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTTGGTGTATACAT	NA	False	NA	NA	False	AATAAA	-16	NA	90081348	90039219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59483_6	chr16	-	3329	19	ISM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	-55	13274	23	9	5prime_fragment	FALSE	canonical	3	105	junction_1	46.5087274432989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGGTGTATACATTAA	NA	False	NA	NA	False	AATAAA	-19	NA	90081368	90039216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59484_5	chr16	-	1563	6	ISM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	-34	28388	-34	-73	5prime_fragment	FALSE	canonical	3	205	junction_5	28.1609658925258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTCGTGTGGTTTAT	NA	False	NA	NA	False	AGTAAA	-17	NA	90081347	90054330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_59486_233	chr16	-	1292	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	42	-1	42	1	multi-exon	FALSE	canonical	3	276	junction_1	13.865424623862	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTTTTTTTTTTT	NA	False	NA	1	True	AATAAA	-26	NA	90524250	90516198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
Isoform_59487_5	chr16	-	1947	4	NIC	ENSMUSG00000022978.12	novel	1333	5	NA	NA	50	-11	intron_retention	FALSE	canonical	3	279	junction_3	14.0554457615387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAACGTTCATTTGTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	90524242	90516210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90517639_90518523_90518647_90523180_90523248_90523913
Isoform_59488_8	chr16	-	2848	3	FSM	ENSMUSG00000022978.12	ENSMUST00000147546.2	493	3	-223	-2132	42	-3	multi-exon	FALSE	canonical	3	279	junction_2	16	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTGTTTGGTTTTTTT	NA	False	NA	-3	True	AATAAA	-22	NA	90524250	90516202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90518647_90523180_90523248_90523913
Isoform_59496_111	chr16	-	7348	39	FSM	ENSMUSG00000039929.15	ENSMUST00000140920.2	7344	39	-5	1	-5	-1	multi-exon	FALSE	canonical	3	66	junction_16	15.3989422955836	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTTGTACTTTGTT	8674	False	NA	-11	True	AATAAA	-15	NA	90607285	90548415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
Isoform_59497_4	chr16	-	2210	15	FSM	ENSMUSG00000039929.15	ENSMUST00000142955.8	2183	15	-24	-3	-3	3	multi-exon	FALSE	canonical	3	76	junction_3	13.5367979211918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCTTTGTTTATTTT	8655	False	NA	NA	False	AGTAAA	-17	NA	90607304	90580027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
Isoform_59498_521	chr16	-	1102	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	288	40	0	-40	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTTTTAGGACAGCTG	NA	False	NA	-38	True	AATAAA	-15	NA	90731714	90722736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
Isoform_59499_103	chr16	-	1122	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	264	44	-24	-44	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAATGTTTTAGGACA	NA	False	NA	-42	True	AATAAA	-11	NA	90731738	90722740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
Isoform_59503_5	chr16	-	6851	29	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	15.5596285565024	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGCTGACTTCTTTAC	2447	False	NA	-22	True	AATAAA	-11	NA	90807950	90732990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
Isoform_59504_6	chr16	-	6829	29	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-41	4	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	14.7490487413769	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACTTCTTTACTCAAAA	2355	False	NA	-16	True	AATAAA	-17	NA	90808042	90732984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
Isoform_59506_14	chr16	-	6824	28	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_27	11.5384488762197	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACTTCTTTACTCAAA	2440	False	NA	-17	True	AATAAA	-16	NA	90807957	90732985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
Isoform_59509_21	chr16	-	6774	28	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	10.2247715554318	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTGACTTCTTTACTCA	2368	False	NA	-19	True	AATAAA	-14	NA	90808029	90732987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
Isoform_5951_47	chr10	+	2606	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	-7	963	-7	-4	multi-exon	FALSE	canonical	3	31	junction_8	31.8009712925239	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATCAGGACAGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	39245752	39440414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_59514_5	chr16	+	3773	2	Antisense	novelGene_ENSMUSG00000022973.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7054	False	NA	NA	False	NA	NA	NA	90754373	90758842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_90757566_90758261
Isoform_59515_21	chr16	-	3023	18	FSM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	-317	26	62	-26	multi-exon	FALSE	canonical	3	97	junction_10	93.9504028766883	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCGTGTCCTTAAATGTG	NA	False	NA	-19	True	AATATA	-35	NA	90841369	90811829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
Isoform_59518_11	chr16	-	3899	18	FSM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	-290	-877	89	-2	multi-exon	FALSE	canonical	3	97	junction_10	93.9504028766883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTTGTATCTTGCT	NA	False	NA	-2	True	ATTAAA	-16	NA	90841342	90810926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
Isoform_59521_17	chr16	-	3506	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	90	-27	intron_retention	FALSE	canonical	3	97	junction_10	90.8908815214706	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90841341	90811830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
Isoform_59525_12	chr16	-	7007	16	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	-58	-26	intron_retention	FALSE	canonical	3	97	junction_10	88.458402025409	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCGTGTCCTTAAATGTG	NA	False	NA	-19	True	AATATA	-35	NA	90841300	90811829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
Isoform_59531_74	chr16	-	2978	18	FSM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	90	905	90	-26	multi-exon	FALSE	canonical	3	98	junction_10	93.8519042470415	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCGTGTCCTTAAATGTG	NA	False	NA	-19	True	AATATA	-35	NA	90841341	90811829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
Isoform_59532_44	chr16	-	3931	18	FSM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	39	3	39	-3	multi-exon	FALSE	canonical	3	98	junction_10	93.8519042470415	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTTTGTTGTATCTTGC	NA	False	NA	-3	True	ATTAAA	-15	NA	90841392	90810927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
Isoform_59539_232	chr16	-	2231	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	115	1	-21	-1	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAATCTGAGTCTTT	NA	False	NA	-7	True	AATAAA	-23	NA	91394573	91371391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
Isoform_59540_31	chr16	-	2272	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	74	1	-62	-1	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAATCTGAGTCTTT	NA	False	NA	-7	True	AATAAA	-23	NA	91394614	91371391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
Isoform_59543_6	chr16	-	3371	2	FSM	ENSMUSG00000039763.11	ENSMUST00000049244.10	3368	2	-3	0	-3	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGGTCCATTGATCT	9246	False	NA	NA	False	AATAAA	-16	NA	91415890	91411141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91414268_91415645
Isoform_5955_14	chr10	+	3551	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	2	9	2	0	multi-exon	FALSE	canonical	3	31	junction_8	31.8009712925239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTGTTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	39245761	39441368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_5956_8	chr10	+	2451	13	NIC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	33.424874303761	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATCAGGACAGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	39245751	39440414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_5958_18	chr10	+	2634	14	NNC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.2435872714507	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATCAGGACAGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	39245731	39440414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405434_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_59581_837	chr16	-	3277	22	FSM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	0	-1	0	1	multi-exon	FALSE	canonical	3	460	junction_21	338.409230453656	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACTTATCTAGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	91443819	91418290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
Isoform_59582_99	chr16	-	3436	22	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	68	junction_21	407.127507368682	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACTTATCTAGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	91443818	91418290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
Isoform_59583_2329	chr16	-	3278	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	23	217	0	1	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	2329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACTTATCTAGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	91443817	91418290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
Isoform_5959_5	chr10	+	3560	14	NNC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.2435872714507	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTTTGTTTATT	NA	False	NA	NA	False	ATTAAA	-22	NA	39245760	39441369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405434_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_5960_9	chr10	+	2534	13	NIC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	33.9276190342519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39245768	39440419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_39246187_39271000_39271041_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_59601_129	chr16	-	1853	11	FSM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	-5	4	-1	-4	multi-exon	FALSE	canonical	3	460	junction_10	453.295984981116	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTGTTTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	91443818	91430296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
Isoform_59608_328	chr16	-	1857	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	4	4	0	-4	multi-exon	FALSE	canonical	3	1247	junction_10	242.657701299588	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTGTTTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	91443819	91430296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
Isoform_59617_5	chr16	-	2220	10	FSM	ENSMUSG00000022960.14	ENSMUST00000117159.8	2215	10	-6	1	-1	-1	multi-exon	FALSE	canonical	1	6	junction_2	60.5189491802075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATTGGGTAAGAAACAAA	NA	False	NA	-2	True	AATAAA	-18	NA	91485659	91476153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91476915_91478044_91478113_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
Isoform_59619_237	chr16	-	2372	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	1	-8	1	8	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAACAAATAGTGCTTA	NA	False	NA	7	True	AATAAA	-27	NA	91485657	91476144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
Isoform_59623_9	chr16	-	2506	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	-3	-138	-3	138	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCACTGTAATACACATG	NA	False	NA	NA	False	AATAAA	-22	NA	91485661	91476014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
Isoform_59624_5	chr16	-	2570	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	1	-206	1	206	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCGGCTGGGTGCCA	NA	False	NA	NA	False	CATAAA	-15	NA	91485657	91475946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
Isoform_59626_4	chr16	-	2880	9	NIC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	-10	15	intron_retention	FALSE	canonical	3	157	junction_4	22.1638077730339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAGTGCTTAGTTATAT	NA	False	NA	14	True	AATAAA	-34	NA	91485668	91476137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91484764_91485294
Isoform_59633_137	chr16	-	1607	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	357	1	5	-1	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTCTGAATTTCTCCG	9185	False	NA	NA	False	TTTAAA	-17	NA	91525506	91486210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_59634_675	chr16	-	1468	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	357	140	5	64	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACGTCATTTGATTTTG	9185	False	NA	-10	True	AATACA	-23	NA	91525506	91486349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_59643_32	chr16	-	1625	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	203	137	30	67	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCATTTGATTTTGTTA	9031	False	NA	-7	True	AATACA	-26	NA	91525660	91486346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_59664_41	chr16	-	939	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	94	121	1	-115	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTCTAGAGTACATTT	9196	False	NA	1	True	AATAAA	-24	NA	91525495	91491346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_59665_25	chr16	-	1067	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	83	4	5	2	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTCTCTTTTTTCTCTT	9185	False	NA	NA	False	AATAAA	-20	NA	91525506	91491229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_59666_43	chr16	-	1532	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	370	5137	3	-115	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTCTAGAGTACATTT	9198	False	NA	1	True	AATAAA	-24	NA	91525493	91491346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_59667_40	chr16	-	1663	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	357	5019	5	-3	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTCTTTTTTCTCTTT	9185	False	NA	NA	False	AATAAA	-21	NA	91525506	91491228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_59676_52	chr16	-	601	6	FSM	ENSMUSG00000058240.15	ENSMUST00000141664.9	762	6	-15	176	-7	-176	multi-exon	FALSE	canonical	3	1466	junction_2	55.2268050859363	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTGTGTACTCG	9188	False	NA	NA	False	TATAAA	-19	NA	91525503	91503906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_59686_751	chr16	-	771	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	62	5	62	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCGTGAGGAGCCTTGT	873	False	NA	-6	True	AATAAA	-15	NA	91728513	91722106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
Isoform_59687_4382	chr16	-	708	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	125	5	-11	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	4382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCGTGAGGAGCCTTGT	936	False	NA	-6	True	AATAAA	-15	NA	91728450	91722106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
Isoform_5969_5	chr10	+	1834	2	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	300	27737	300	-18188	5prime_fragment	FALSE	canonical	3	65	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTAAAAAAGAAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	39489229	39503566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_39489343_39501845
Isoform_59693_60	chr16	-	2187	4	FSM	ENSMUSG00000022951.17	ENSMUST00000023672.10	2190	4	3	0	3	0	multi-exon	FALSE	canonical	3	20	junction_3	123.764112551077	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGTTGTTGGTCGTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	92196962	92188842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92196783
Isoform_59695_769	chr16	-	2288	4	FSM	ENSMUSG00000022951.17	ENSMUST00000232239.2	2319	4	31	0	31	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGTTGTTGGTCGTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	92263000	92188842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
Isoform_59696_241	chr16	-	2443	4	FSM	ENSMUSG00000022951.17	ENSMUST00000060005.15	2324	4	-119	0	-119	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTTGGTCGTTTTCT	NA	False	NA	-3	True	AATAAA	-24	NA	92263153	92188840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
Isoform_59697_31	chr16	-	2473	4	FSM	ENSMUSG00000022951.17	ENSMUST00000060005.15	2324	4	-149	0	-149	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTTGGTCGTTTTCT	NA	False	NA	-3	True	AATAAA	-24	NA	92263183	92188840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
Isoform_59699_6	chr16	-	741	4	NNC	ENSMUSG00000022948.17	novel	467	4	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	65.576079649688	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCATTTGCAGACTGTC	NA	False	NA	-8	True	AATAAA	-14	NA	93383548	93380351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_93380573_93382066_93382191_93383124_93383235_93383262
Isoform_59702_7	chr16	-	1787	12	NIC	ENSMUSG00000022948.17	novel	2408	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	40.1213036710482	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	-1	True	AATAAA	-21	NA	93400676	93380344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400024_93400085_93400453
Isoform_59704_25	chr16	-	1751	11	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	28.7090578041147	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTTGCAGACTGTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	93400705	93380349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
Isoform_59706_14	chr16	-	1589	11	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	0	1	combination_of_known_splicesites	TRUE	canonical	3	12	junction_10	36.3512035564161	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTTGCAGACTGTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	93400951	93380349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400861
Isoform_59707_3	chr16	-	1725	11	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	-136	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	36.3512035564161	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTTGCAGACTGTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	93401087	93380349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400861
Isoform_59708_6	chr16	-	1234	9	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	42.4365334941486	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93400705	93380347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93393185_93393224_93396099_93396196_93398525_93398687_93400453
Isoform_5971_9	chr10	+	1966	3	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	323	19707	323	-10158	5prime_fragment	FALSE	canonical	3	53	junction_2	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	39489252	39511596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_39489343_39501845_39502656_39510530
Isoform_59712_9	chr16	-	2019	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-336	-4	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAATACACCTTTAAAT	6235	False	NA	NA	False	AATAAA	-24	NA	93592125	93589027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_93590271_93590397_93590505_93591456
Isoform_59714_20	chr16	-	1847	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-164	-4	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAATACACCTTTAAAT	6407	False	NA	NA	False	AATAAA	-24	NA	93591953	93589027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_93590271_93590397_93590505_93591456
Isoform_59717_14	chr16	-	2570	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-12	871	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCAGCCTGAGTGGGCTC	6559	False	NA	NA	False	NA	NA	NA	93591801	93588152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_93590271_93590397_93590505_93591456
Isoform_5972_213	chr10	+	2075	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	309	483	309	1	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTTTATCTCAGTG	NA	False	NA	4	True	AATAAA	-17	NA	39489238	39530820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
Isoform_59720_3	chr16	-	1585	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	-18	13	-18	-13	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAATTGCATAACAAATACA	6553	False	NA	NA	False	AATAAA	-15	NA	93591807	93589036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_93590271_93591456
Isoform_59721_3	chr16	-	1740	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	-159	-1	-159	1	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACACCTTTAAATAATAT	6412	False	NA	NA	False	AATAAA	-29	NA	93591948	93589022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_93590271_93591456
Isoform_59723_26	chr16	-	5252	11	FSM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	-14	-1217	-14	111	multi-exon	FALSE	canonical	3	36	junction_1	5.0438080851674	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTCCATTCTTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	94091159	93930053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
Isoform_59726_4	chr16	-	2517	10	ISM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	13	2526	-3	65	5prime_fragment	FALSE	canonical	3	37	junction_4	4.93913572686508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTCTGATAGTTTATT	NA	False	NA	NA	False	TTTAAA	-34	NA	94091132	93933796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
Isoform_59727_5	chr16	-	2136	6	FSM	ENSMUSG00000040820.17	ENSMUST00000226776.2	3388	6	-8	1260	8	-1260	multi-exon	FALSE	canonical	3	38	junction_5	3.26190128606002	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCAGCTTTTGTGGCTGG	NA	False	NA	NA	False	ATTAAA	-31	NA	94091137	94031687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
Isoform_59728_10	chr16	-	3895	4	ISM	ENSMUSG00000040820.17	ENSMUST00000226776.2	3388	6	-26	35376	-10	-35376	5prime_fragment	FALSE	canonical	3	38	junction_3	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTCGTAGCCTTCATC	NA	False	NA	NA	False	AATAAA	-31	NA	94091155	94065803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_94069167_94069394_94069558_94088650_94088786_94090921
Isoform_5973_5	chr10	+	2344	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	41	482	41	0	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTTATCTCAGTGG	NA	False	NA	5	True	AATAAA	-18	NA	39488970	39530821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
Isoform_59730_17	chr16	-	1157	4	FSM	ENSMUSG00000022940.18	ENSMUST00000138514.2	695	4	-215	-247	-12	-7	multi-exon	FALSE	canonical	3	395	junction_3	26.0298973404728	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATAGTCAACCTTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	94171583	94165317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947
Isoform_59735_69	chr16	-	804	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	157	5	-28	0	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94171396	94165310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
Isoform_59736_6	chr16	-	930	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	35	1	35	-1	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGAGTAGATCTATATG	NA	False	NA	NA	False	AATAAA	-27	NA	94171518	94165306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
Isoform_59739_88	chr16	-	736	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	4	5	4	0	multi-exon	TRUE	canonical	3	162	junction_4	117.933243828871	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94171567	94165310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
Isoform_59741_8	chr16	-	895	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113914.8	912	5	12	5	12	0	multi-exon	FALSE	canonical	3	19	junction_4	179.103845575688	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94171862	94165310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171599
Isoform_59742_8	chr16	-	745	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113905.8	758	5	4	9	4	-4	multi-exon	FALSE	canonical	2	8	junction_4	183.830084589003	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCAACCTTGAGTAGA	NA	False	NA	NA	False	AATAAA	-19	NA	94171870	94165314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171753
Isoform_59745_713	chr16	-	2138	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	403	6	5	-6	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGGTTTGGACTGCA	NA	False	NA	-19	True	AATAAA	-17	NA	94327286	94298647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
Isoform_59746_115	chr16	-	2204	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	396	-53	-2	53	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAATGTGTTCCTCAGTA	NA	False	NA	-4	True	AGTAAA	-14	NA	94327293	94298588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
Isoform_59747_31	chr16	-	2354	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	191	2	191	-2	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTTGGACTGCATATT	NA	False	NA	-15	True	AATAAA	-21	NA	94327498	94298643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
Isoform_59756_3	chr16	-	3267	11	NNC	ENSMUSG00000040732.21	novel	3249	11	NA	NA	-15125	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.4456832294801	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTGGTAGTCTCCGTT	3454	False	NA	NA	False	AATAAA	-28	NA	95346349	95160030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752_95190905_95210593_95210812_95325385_95325474_95331122_95331225_95346256
Isoform_5976_6	chr10	+	3982	8	NIC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	309	1	intron_retention	FALSE	canonical	3	53	junction_2	7.89212989539036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTTTATCTCAGTG	NA	False	NA	4	True	AATAAA	-17	NA	39489238	39530820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
Isoform_59760_727	chr16	-	986	7	FSM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	49	9	-21	-9	multi-exon	FALSE	canonical	3	1101	junction_3	73.0062782688357	727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAATTGTAACTTTA	NA	False	NA	-19	True	AATAAA	-7	NA	95792111	95781141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
Isoform_59766_9	chr16	-	10738	44	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-9	-490	combination_of_known_junctions	TRUE	canonical	3	75	junction_31	102.463997291444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGGGTGGTCATTGC	NA	False	NA	0	True	AATAAA	-27	NA	95883637	95800960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
Isoform_59769_5	chr16	-	8488	44	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-6	1754	combination_of_known_junctions	FALSE	canonical	3	75	junction_31	102.463997291444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTGTGAATGTGACTA	NA	False	NA	-1	True	AATATA	-17	NA	95883732	95803305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
Isoform_59776_301	chr16	-	2296	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	79	7	0	-7	multi-exon	FALSE	canonical	3	425	junction_4	11.1214882097676	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTAAGTATTCTA	NA	False	NA	38	True	AATAAA	-10	NA	95883647	95867874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
Isoform_59780_10	chr16	-	2553	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	-177	6	-177	-6	multi-exon	FALSE	canonical	3	425	junction_4	11.1214882097676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATACGTAAGTATTCTAT	NA	False	NA	39	True	AATAAA	-11	NA	95883903	95867873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
Isoform_59782_6	chr16	-	2419	4	NIC	ENSMUSG00000022914.18	novel	2382	5	NA	NA	-12	0	intron_retention	FALSE	canonical	3	425	junction_3	5.71547606649408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	NA	False	NA	45	True	AATAAA	-17	NA	95883659	95867867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_95869828_95883013_95883208_95883321_95883381_95883453
Isoform_59788_4876	chr16	-	1180	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	24	970	24	646	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	4876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928905	95922787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
Isoform_598_765	SIRV3	+	1082	8	FSM	SIRV3A	SIRV304	1083	8	1	0	1	0	multi-exon	FALSE	canonical	3	1134	junction_6	907.203057620014	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1964	8937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
Isoform_5980_5	chr10	+	10833	33	FSM	ENSMUSG00000019841.16	ENSMUST00000131186.8	10789	33	-8	-36	1	-2	multi-exon	FALSE	canonical	3	21	junction_2	18.85944619912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGTGCTATGACTTTT	NA	False	NA	11	True	AATAAA	-7	NA	39608114	39751200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39608610_39618686_39618815_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
Isoform_59803_3	chr16	-	778	8	NNC	ENSMUSG00000022938.9	novel	806	8	NA	NA	49	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	13.0384048104053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCAGCTGAATGTCACA	NA	False	NA	-17	True	AATAAA	-17	NA	97313681	97272296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313629
Isoform_59804_7	chr16	-	821	8	FSM	ENSMUSG00000022938.9	ENSMUST00000231414.2	806	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	14	junction_7	10.770329614269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGTCACAGGAGTCT	NA	False	NA	-10	True	AATAAA	-24	NA	97313745	97272289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313657
Isoform_59806_179	chr16	-	3579	8	FSM	ENSMUSG00000005251.16	ENSMUST00000019386.10	3591	8	11	1	11	-1	multi-exon	FALSE	canonical	3	41	junction_1	9.512612465478	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGCAGACTATTATTTCT	NA	False	NA	1	True	AATAAA	-21	NA	97564976	97543133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97551343_97552693_97552843_97556267_97556560_97564727
Isoform_59809_3	chr16	-	6190	24	FSM	ENSMUSG00000014039.19	ENSMUST00000121584.8	6194	24	1	3	1	-3	multi-exon	FALSE	canonical	0	0	junction_23	11.3557360404684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGCTGGCCCTCTGCTC	6484	False	NA	-3	True	AATAAA	-22	NA	97653049	97592722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
Isoform_59810_3	chr16	-	5176	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	18	-177	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	8.7757183474732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGCAATCCATAGCC	6501	False	NA	NA	False	AATAAA	-27	NA	97653032	97593708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
Isoform_59812_5	chr16	-	5323	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	8.7757183474732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTTTTTAAAGAT	6532	False	NA	NA	False	AATAAA	-16	NA	97653001	97593530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
Isoform_59813_6	chr16	-	5338	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	30	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	11.2545726896769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTTTTTAAAGAT	6513	False	NA	NA	False	AATAAA	-16	NA	97653020	97593530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
Isoform_59814_5	chr16	-	6130	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	11.2545726896769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTGGCCCTCTGCTCTC	6531	False	NA	-1	True	AATAAA	-24	NA	97653002	97592720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
Isoform_59815_3	chr16	-	5194	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	2	-171	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	11.2545726896769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATCCATAGCCCTAATC	6485	False	NA	NA	False	AATAAA	-33	NA	97653048	97593702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
Isoform_59816_5	chr16	-	3027	14	NIC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	26.149999717153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGTTCTATGCAGAT	NA	False	NA	-1	True	ATTAAA	-16	NA	97723834	97659946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691205_97691319_97693389_97693510_97713805_97713905_97723254
Isoform_59818_166	chr16	-	2985	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	28	3543	1	-1	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTAAGTGTGTTCTATG	NA	False	NA	-6	True	ATTAAA	-11	NA	97723805	97659951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
Isoform_59823_4	chr16	-	3525	15	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	-5	525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.0181451596962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCATTGTGGGTTCA	NA	False	NA	NA	False	CATAAA	-28	NA	97723838	97659424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_97659722_97659741_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
Isoform_59824_25	chr16	-	6523	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	27	6	0	-6	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGTTGGTTCCGAGTG	NA	False	NA	-4	True	AATAAA	-21	NA	97723806	97656414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
Isoform_59825_15	chr16	-	4468	15	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	1	1501	at_least_one_novel_splicesite	TRUE	non_canonical	1	3	junction_1	25.3763508738642	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGGTATGGTGGTACA	NA	False	NA	NA	False	AATAAA	-14	NA	97723805	97658448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_97659711_97659730_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
Isoform_59826_4	chr16	-	1333	7	ISM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	30	26273	3	-19	5prime_fragment	FALSE	canonical	3	55	junction_3	16.6799946709291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATTAAAGAAATGAAAACA	NA	False	NA	NA	False	AAGAAA	-6	NA	97723803	97682681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
Isoform_59827_4	chr16	-	3084	4	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	32.7448045073142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763831	97750964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97752070_97752669_97754294_97757957_97758095_97763613
Isoform_59828_5	chr16	-	3408	4	NNC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	357	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	33.1360830515618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTAAGTTTGGGATGA	310	False	NA	-7	True	AATAAA	-21	NA	97763436	97750966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_97752070_97752669_97754294_97757957_97758101_97762898
Isoform_59829_57	chr16	-	3068	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	0	4	0	-1	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763809	97750964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
Isoform_59830_4	chr16	-	5003	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-6	-1925	0	-3	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATGCAGTTGTGGTT	NA	False	NA	-3	True	AATAAA	-18	NA	97763815	97749035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
Isoform_59832_5	chr16	-	4576	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-6	-1498	0	-430	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGCCATCTGCTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	97763815	97749462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
Isoform_59834_24	chr16	-	2931	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	4.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763815	97750964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97752070_97752669_97754294_97763613
Isoform_59835_4	chr16	-	5257	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGTTATTGTTTTC	NA	False	NA	-5	True	AATATA	-15	NA	97763817	97748640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97752070_97752669_97754294_97763613
Isoform_59836_17	chr16	-	2832	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	8	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763815	97750964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97752070_97752669_97754294_97763712
Isoform_59837_5	chr16	-	1621	4	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-5	-8	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	32.8734948958377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATTTTAAGTTTGG	NA	False	NA	-12	True	AATAAA	-16	NA	97763827	97750971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97752070_97754127_97754294_97757957_97758101_97763613
Isoform_59838_5	chr16	-	1472	3	FSM	ENSMUSG00000046962.17	ENSMUST00000232187.2	1452	3	-22	2	0	-2	multi-exon	FALSE	canonical	2	7	junction_1	12.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTTGGGATGAA	NA	False	NA	-6	True	AATAAA	-22	NA	97763815	97750965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97752070_97754127_97754294_97763613
Isoform_59839_9	chr16	-	3668	3	FSM	ENSMUSG00000046962.17	ENSMUST00000231263.2	889	3	-14	-2765	0	-1	multi-exon	FALSE	canonical	2	6	junction_2	40	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763815	97750964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97754294_97757957_97758095_97763613
Isoform_5984_5	chr10	+	10712	32	FSM	ENSMUSG00000019841.16	ENSMUST00000019986.13	10713	32	-1	2	-1	1	multi-exon	FALSE	canonical	3	30	junction_10	17.5666413596239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTATGACTTTTATCTT	NA	False	NA	16	True	AATAAA	-12	NA	39608112	39751205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
Isoform_59840_7	chr16	-	4014	3	NNC	ENSMUSG00000046962.17	novel	6010	3	NA	NA	353	-1	intron_retention	FALSE	canonical	3	5	junction_2	40.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	306	False	NA	-5	True	AATAAA	-23	NA	97763440	97750964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_97754294_97757957_97758101_97762898
Isoform_59841_113	chr16	-	3674	3	FSM	ENSMUSG00000046962.17	ENSMUST00000113734.9	6010	3	6	2330	0	-1	multi-exon	FALSE	canonical	3	60	junction_2	13	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763815	97750964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97754294_97757957_97758101_97763613
Isoform_59843_18	chr16	-	3575	3	FSM	ENSMUSG00000046962.17	ENSMUST00000231560.2	397	3	7	-3185	0	-1	multi-exon	FALSE	canonical	2	12	junction_2	37	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763815	97750964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97754294_97757957_97758101_97763712
Isoform_59844_47	chr16	-	3529	2	FSM	ENSMUSG00000046962.17	ENSMUST00000063605.15	5463	2	-5	1939	1	-8	multi-exon	FALSE	canonical	3	32	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATTTTAAGTTTGG	NA	False	NA	-12	True	AATAAA	-16	NA	97763820	97750971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_97754294_97763613
Isoform_59845_40	chr16	-	3448	2	NIC	ENSMUSG00000046962.17	novel	1452	3	NA	NA	-8	0	intron_retention	FALSE	canonical	3	25	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTTGGGATGAATT	NA	False	NA	-4	True	AATAAA	-24	NA	97763830	97750963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97754294_97763712
Isoform_59846_3	chr16	-	7974	4	ISM	ENSMUSG00000116673.2	ENSMUST00000232614.2	497	5	-11	6882	-11	3500	5prime_fragment	FALSE	canonical	3	34	junction_3	16.6599986661331	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACGTGTGCTCAGCAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	97883221	97860211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883089
Isoform_59847_3	chr16	-	7742	4	ISM	ENSMUSG00000116673.2	ENSMUST00000232614.2	497	5	-437	7540	3	2842	5prime_fragment	FALSE	canonical	3	34	junction_3	16.6599986661331	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGTCTTTCATCATCCA	NA	False	NA	2	True	TTTAAA	-9	NA	97883647	97860869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883089
Isoform_59849_9	chr16	-	7286	4	NIC	ENSMUSG00000116673.2	novel	2142	5	NA	NA	1	2840	intron_retention	FALSE	canonical	3	11	junction_3	25.8069758011279	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCAGTCTTTCATCATC	NA	False	NA	0	True	TTTAAA	-7	NA	97883649	97860871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_97867866_97868954_97869016_97869203_97869331_97883545
Isoform_59850_135	chr16	-	706	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	705	junction_1	0	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAATTCACTTTGGCTGT	NA	False	NA	-9	True	AATAAA	-27	NA	48422120	48420470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_48421063_48422006
Isoform_59859_7	chr16	-	2127	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATGTTTATAGCATAAA	4073	False	NA	NA	False	AATAAA	-31	NA	55936660	55932433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_55934491_55936590
Isoform_59861_12	chr16	-	2109	3	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-17	-5110	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCATTTCTGCTGCTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43800171	43794618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_43796109_43799270_43799540_43799821
Isoform_59863_8	chr16	-	596	2	Intergenic	novelGene_4389	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGTAGTGCTGGAGTA	NA	False	NA	NA	False	NA	NA	NA	20273124	20270692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_20271065_20272900
Isoform_59864_5	chr16	-	1040	2	Intergenic	novelGene_4388	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAGATGGAAATTGAAA	NA	False	NA	NA	False	AATAAA	-31	NA	20273124	20270248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_20271065_20272900
Isoform_59865_6	chr16	-	940	4	NNC	ENSMUSG00000023791.19	novel	670	2	NA	NA	2	-2151	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	180.697414357692	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTAGCTCTTGCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	31918554	31908470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_31908938_31911161_31911304_31915817_31915882_31918287
Isoform_59868_9	chr16	-	798	3	NNC	ENSMUSG00000002846.10	novel	678	3	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	92	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATTTTAGTATTTAATA	NA	False	NA	-3	True	ATTAAA	-20	NA	38343029	38337020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_38337326_38338728_38338895_38342702
Isoform_5987_15	chr10	+	4075	13	FSM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	14	1718	14	-1	multi-exon	FALSE	canonical	3	22	junction_12	6.08447477875727	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTGTATGTATGTGTA	NA	False	NA	NA	False	NA	NA	NA	40225317	40358096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
Isoform_59877_3	chr16	-	2081	11	NNC	ENSMUSG00000035629.20	novel	653	2	NA	NA	2	900	intron_retention	FALSE	canonical	0	0	junction_1	22.3492729188222	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGTGTGACCTCCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	32688706	32654994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_32655204_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
Isoform_5988_13	chr10	+	5791	13	FSM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	16	0	-13	0	multi-exon	FALSE	canonical	3	22	junction_12	6.08447477875727	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	8	True	AATAAA	-16	NA	40225319	40359814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
Isoform_59881_9	chr16	-	5566	3	FSM	ENSMUSG00000039789.8	ENSMUST00000090522.5	5668	3	83	19	83	-19	multi-exon	FALSE	canonical	3	7	junction_2	9.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTGGTGAACTTTTAAA	NA	False	NA	-4	True	AATAAA	-14	NA	3690177	3679410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_3684595_3689013_3689141_3689922
Isoform_59883_5	chr16	-	5649	3	FSM	ENSMUSG00000039789.8	ENSMUST00000090522.5	5668	3	0	19	0	-19	multi-exon	FALSE	canonical	3	7	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTGGTGAACTTTTAAA	NA	False	NA	-4	True	AATAAA	-14	NA	3690260	3679410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_3684595_3689013_3689141_3689922
Isoform_59886_13	chr16	-	4724	3	FSM	ENSMUSG00000039789.8	ENSMUST00000119599.3	1842	3	24	-2906	24	0	multi-exon	FALSE	canonical	3	18	junction_2	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAACTGTTATTTCTGA	4414	False	NA	-4	True	AATAAA	-37	NA	3702401	3680247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_3684595_3689013_3689141_3702151
Isoform_59888_3	chr16	-	6309	16	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-9	-15	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	13.6521874519149	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	5	True	AATAAA	-21	NA	3821643	3797011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821421
Isoform_59890_7	chr16	-	6083	16	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-38	-96	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	9.12724858139991	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGAGTGTCCTTGTGTG	NA	False	NA	-76	True	AAAACA	-20	NA	3821672	3797092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
Isoform_59891_5	chr16	-	5961	15	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-19	-15	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	14.9829835452879	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	5	True	AATAAA	-21	NA	3821653	3797011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3816981_3817210_3818816_3819543_3821595
Isoform_59907_901	chr16	-	2320	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_15	112.803285922348	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895691	3857834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
Isoform_59908_2322	chr16	-	2290	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	29	1	-23	-1	multi-exon	FALSE	canonical	3	963	junction_15	112.803285922348	2322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGACGTTTTCTCTGTTC	NA	False	NA	-4	True	ATTAAA	-21	NA	3895662	3857835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
Isoform_5991_5	chr10	+	5734	12	FSM	ENSMUSG00000038481.14	ENSMUST00000214659.2	3814	12	-203	-1717	-14	0	multi-exon	FALSE	canonical	1	1	junction_4	10.2900095976953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	8	True	AATAAA	-16	NA	40225318	40359814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
Isoform_59913_111	chr16	-	3035	17	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-23	0	intron_retention	TRUE	canonical	3	963	junction_14	113.904410993385	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895662	3857834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
Isoform_5992_3	chr10	+	922	5	FSM	ENSMUSG00000063428.9	ENSMUST00000213442.2	2408	5	-45	1531	-10	-1531	multi-exon	FALSE	canonical	3	5	junction_2	1.29903810567666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTGTTTTGTTGTT	NA	False	NA	NA	False	TTTAAA	-43	NA	40505996	40516033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_40506088_40507601_40507777_40508933_40509043_40513340_40513518_40515663
Isoform_59921_3	chr16	-	3665	3	ISM	ENSMUSG00000022521.11	ENSMUST00000205765.2	7749	30	125009	-724	191	724	3prime_fragment	FALSE	canonical	3	49	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAAGGGTGGTCCTTCTT	2394	False	NA	-4	True	AATAAA	-15	NA	3906268	3900840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_3904063_3905544_3905827_3906107
Isoform_59923_3	chr16	-	2393	16	ISM	ENSMUSG00000022521.11	ENSMUST00000205765.2	7749	30	94196	8145	7385	-7	internal_fragment	FALSE	canonical	3	34	junction_6	8.27741237075667	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGGAAAAA	NA	False	NA	NA	False	AAGAAA	-21	NA	3937081	3909709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896
Isoform_59925_12	chr16	-	5168	11	FSM	ENSMUSG00000005580.12	ENSMUST00000117801.8	4507	11	-676	15	14	1	multi-exon	TRUE	canonical	2	3	junction_5	2.72763633939717	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	4238348	4105407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4106954_4112526_4112569_4115272_4115422_4116550_4116711_4122240_4122450_4125019_4125123_4129388_4129607_4130548_4130654_4141630_4141822_4235716_4237453_4237639
Isoform_59926_5	chr16	-	3748	6	NIC	ENSMUSG00000022519.15	novel	3698	6	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	11.9498953970317	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTTGGCCTTCTTGATT	NA	False	NA	0	True	AATAAA	-18	NA	4359673	4298076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311742_4359543
Isoform_59927_13	chr16	-	3724	6	NNC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	26995	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	10.4192130221049	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTTGGCCTTCTTGATT	6778	False	NA	0	True	AATAAA	-18	NA	4313932	4298076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4313829
Isoform_59928_9	chr16	-	3804	6	NNC	ENSMUSG00000022519.15	novel	3698	6	NA	NA	27006	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	11.1821285987955	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGCCTTGGCCTTCTTG	6789	False	NA	-3	True	AATAAA	-15	NA	4313921	4298079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4313735
Isoform_59929_38	chr16	-	3747	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	9	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTTGGCCTTCTTGATT	NA	False	NA	0	True	AATAAA	-18	NA	4359669	4298076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
Isoform_59930_9	chr16	-	3846	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	-89	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTGGCCTTCTTGAT	NA	False	NA	-1	True	AATAAA	-17	NA	4359769	4298077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
Isoform_59931_3	chr16	-	5105	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	43	1395	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGACTTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	4359635	4296684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
Isoform_59934_8	chr16	-	1871	7	NNC	ENSMUSG00000005718.9	novel	2247	7	NA	NA	-896	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	41.7149719991383	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGTAGTTATTGAGG	NA	False	NA	-3	True	AATAAA	-19	NA	4378614	4362527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4378560
Isoform_59935_246	chr16	-	2155	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	90	2	90	-2	multi-exon	TRUE	canonical	3	103	junction_5	11.6010057035299	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTAGTTATTGAGGA	NA	False	NA	-2	True	AATAAA	-20	NA	4377628	4362526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
Isoform_59937_54	chr16	-	2207	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	38	2	38	-2	multi-exon	FALSE	canonical	3	103	junction_5	11.6010057035299	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTAGTTATTGAGGA	NA	False	NA	-2	True	AATAAA	-20	NA	4377680	4362526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
Isoform_5994_9	chr10	+	2507	5	FSM	ENSMUSG00000063428.9	ENSMUST00000019977.8	3000	5	-10	503	-10	-503	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCTTACGATTGGCC	NA	False	NA	NA	False	AATAAA	-18	NA	40505996	40525424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_40506088_40507601_40507777_40508933_40509043_40513340_40513518_40523469
Isoform_59941_7	chr16	-	703	5	NNC	ENSMUSG00000014301.14	novel	596	5	NA	NA	-22	-10	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	540.407947757988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTGCATATGTTCCTGT	NA	False	NA	-25	True	AATAAA	-18	NA	4442822	4434337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4436015_4442714
Isoform_59942_483	chr16	-	542	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	53	1	1	-1	multi-exon	FALSE	canonical	3	1132	junction_4	70.3491293478462	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCCTGTTTGAGAAGG	NA	False	NA	-16	True	AATAAA	-27	NA	4442799	4434328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
Isoform_59943_69	chr16	-	564	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	31	1	-21	-1	multi-exon	FALSE	canonical	3	1132	junction_4	70.3491293478462	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCCTGTTTGAGAAGG	NA	False	NA	-16	True	AATAAA	-27	NA	4442821	4434328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
Isoform_59944_9	chr16	-	467	4	NIC	ENSMUSG00000014301.14	novel	596	5	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_3	586.024648704207	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCCTGTTTGAGAAGG	NA	False	NA	-16	True	AATAAA	-27	NA	4442809	4434328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4434498_4434676_4434743_4434989_4435127_4442714
Isoform_59947_256	chr16	-	3500	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	45	751	10	493	multi-exon	FALSE	canonical	3	90	junction_15	10.2195380265448	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497596	4444747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
Isoform_59948_18	chr16	-	5196	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	47	-947	12	947	multi-exon	TRUE	canonical	3	90	junction_15	10.2195380265448	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGTTCTCTTAAATAT	NA	False	NA	NA	False	AATAAA	-14	NA	4497594	4443049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
Isoform_5995_14	chr10	+	2550	9	FSM	ENSMUSG00000019831.15	ENSMUST00000019975.14	2609	9	53	6	53	-6	multi-exon	FALSE	canonical	3	17	junction_1	81.4024531264261	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTCTTGGGTGTCGCTC	NA	False	NA	11	True	AATAAA	-13	NA	40759523	40814559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_40759606_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
Isoform_59950_9	chr16	-	4041	29	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-3980	493	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_28	22.0708506627994	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	7972	False	NA	-1	True	ATTAAA	-16	NA	4501621	4444747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339
Isoform_59951_4	chr16	-	3428	27	NIC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-7	491	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	24.0916949032983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTTGTGCTGCTCC	NA	False	NA	-3	True	ATTAAA	-14	NA	4497584	4444749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
Isoform_59953_4	chr16	-	1115	10	FSM	ENSMUSG00000039637.16	ENSMUST00000090480.6	1150	10	45	-10	10	10	multi-exon	FALSE	canonical	1	1	junction_1	36.6029749853448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTGCTTCATGTTCC	NA	False	NA	NA	False	ACTAAA	-29	NA	4497596	4470416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4470626_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
Isoform_59955_264	chr16	-	1182	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	-2	1260	1	-2	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGTTTCCCAAAAGAAAA	4841	False	NA	-8	True	AATAAA	-16	NA	4536975	4529182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
Isoform_59957_6	chr16	-	1309	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	-130	1261	-83	-3	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTTTCCCAAAAGAAA	4713	False	NA	-9	True	AATAAA	-15	NA	4537103	4529183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
Isoform_59959_13	chr16	-	1257	5	FSM	ENSMUSG00000063445.15	ENSMUST00000115851.10	1306	5	47	2	0	-2	multi-exon	FALSE	canonical	1	3	junction_1	76.6811580507233	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGTTTCCCAAAAGAAAA	4843	False	NA	-8	True	AATAAA	-16	NA	4536973	4529182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4529545_4531503_4531695_4532280_4532531_4534160_4534400_4536758
Isoform_59960_6	chr16	-	3235	4	NIC	ENSMUSG00000063445.15	novel	1306	5	NA	NA	-1	13	intron_retention	FALSE	canonical	3	167	junction_3	9.79795897113271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGGCCTCTGTCTGTGG	4839	False	NA	7	True	AATAAA	-31	NA	4536977	4529167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4531695_4532280_4532531_4534160_4534400_4536758
Isoform_59961_20	chr16	-	1151	4	ISM	ENSMUSG00000063445.15	ENSMUST00000074970.8	1155	5	-24	1116	20	1098	5prime_fragment	FALSE	canonical	3	167	junction_3	9.79795897113271	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGCTAGGTTTTTTTG	4816	False	NA	NA	False	NA	NA	NA	4537000	4531274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_4531695_4532280_4532531_4534160_4534400_4536758
Isoform_59965_527	chr16	-	2525	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	49	1379	-6	1	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	-13	True	AATAAA	-15	NA	4607805	4584703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
Isoform_59967_24	chr16	-	3908	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	50	-5	-5	5	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCTCTATACTAAGTA	NA	False	NA	2	True	TATAAA	-26	NA	4607804	4583319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
Isoform_59968_16	chr16	-	2578	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	-4	1379	-4	1	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	-13	True	AATAAA	-15	NA	4607858	4584703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
Isoform_5997_374	chr10	+	2715	9	FSM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	2	2	2	-1	multi-exon	FALSE	canonical	3	202	junction_5	32.5209067370515	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGTGTCGCTCTTCGA	NA	False	NA	16	True	AATAAA	-18	NA	40759824	40814564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
Isoform_59973_30	chr16	-	2541	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	12	1	12	-1	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTCTATTTTAGACCA	NA	False	NA	-15	True	AATAAA	-13	NA	4608144	4584705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
Isoform_59978_42	chr16	-	3140	5	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	434	junction_4	30.8139578762612	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	-13	True	AATAAA	-15	NA	4607799	4584703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4607694
Isoform_5998_5	chr10	+	2963	9	FSM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	-246	2	106	-1	multi-exon	FALSE	canonical	3	202	junction_5	32.5209067370515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGTGTCGCTCTTCGA	NA	False	NA	16	True	AATAAA	-18	NA	40759576	40814564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
Isoform_59984_43	chr16	-	1984	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	-140	7	-140	3	multi-exon	FALSE	canonical	3	334	junction_1	8.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGGCTCTGTAGTCTT	NA	False	NA	-8	True	NA	NA	NA	4698319	4692648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4693734_4694225_4694286_4697480
Isoform_59985_88	chr16	-	1347	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	498	6	-12	4	multi-exon	FALSE	canonical	3	334	junction_1	8.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCTGTAGTCTTG	157	False	NA	-7	True	NA	NA	NA	4697681	4692647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4693734_4694225_4694286_4697480
Isoform_59988_155	chr16	-	2440	17	FSM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	-38	-4	-6	4	multi-exon	FALSE	canonical	3	59	junction_1	12.8608842522589	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8185	False	NA	-1	True	AATAAA	-17	NA	4782075	4759295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
Isoform_59989_5	chr16	-	2270	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	3	5	junction_15	24.2840597008728	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGGGCTCATTTGTGAT	8182	False	NA	-2	True	AATAAA	-16	NA	4782078	4759296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4781983
Isoform_59991_4	chr16	-	1934	14	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-3	2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	27.1774793646391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGGGCTCATTTGTGA	8196	False	NA	-3	True	AATAAA	-15	NA	4782064	4759297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4781983
Isoform_59992_5	chr16	-	3517	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	2	intron_retention	FALSE	canonical	3	59	junction_1	13.1182654679988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGGGCTCATTTGTGA	8191	False	NA	-3	True	AATAAA	-15	NA	4782069	4759297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
Isoform_59993_23	chr16	-	2352	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-6	5	combination_of_known_junctions	TRUE	canonical	3	18	junction_1	20.4717691793683	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGCTCATTTGTGATCA	8185	False	NA	0	True	AATAAA	-18	NA	4782075	4759294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
Isoform_59994_8	chr16	-	2536	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	70	junction_1	11.019175206077	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGGGGGCTCATTTG	8185	False	NA	-6	True	AATAAA	-12	NA	4782075	4759300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
Isoform_59995_5	chr16	-	1968	7	ISM	ENSMUSG00000022515.7	ENSMUST00000229765.2	1779	11	-7	3835	-6	764	5prime_fragment	FALSE	canonical	3	74	junction_6	6.51707159867238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGACAAAAAACAAAAAA	8185	False	NA	NA	False	NA	NA	NA	4782075	4767467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
Isoform_59998_9	chr16	-	1900	10	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	18	junction_6	156.103795795389	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831424	4826593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828761_4829475_4830160_4830290_4830374_4831166_4831239_4831326
Isoform_6_27737	ERCC-00002	+	1044	1	FSM	ERCC-00002A	DQ459430	1045	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27737	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00002_+_0_1000
Isoform_600_616	SIRV3	+	779	5	FSM	SIRV3A	SIRV307	779	5	1	-1	1	1	multi-exon	FALSE	canonical	3	1252	junction_4	794.143052289699	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1964	8940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
Isoform_60001_567	chr16	-	1349	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	6	0	6	0	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831375	4826593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
Isoform_60002_210	chr16	-	1384	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	-29	0	7	0	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831410	4826593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
Isoform_60003_63	chr16	-	1928	10	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	413	junction_6	42.8808282580778	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831406	4826593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
Isoform_60008_9	chr16	-	1288	10	NIC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	4	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_4	156.342769990796	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831413	4826593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
Isoform_60025_781	chr16	-	3282	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	4	-6	-2	6	multi-exon	FALSE	canonical	3	303	junction_6	221.604291976086	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTATCATTGTACCCAAA	8114	False	NA	-2	True	AATAAA	-19	NA	4867723	4831766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
Isoform_6003_20	chr10	+	2510	2	FSM	ENSMUSG00000019826.12	ENSMUST00000216656.2	2476	2	-35	1	17	-1	multi-exon	FALSE	canonical	3	104	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTTTAGACTCTTCAG	NA	False	NA	NA	False	AATAAA	-15	NA	41326395	41329463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_41326527_41327084
Isoform_60047_63	chr16	-	3426	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	374.363788438131	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8111	False	NA	-3	True	AATAAA	-18	NA	4867726	4831767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
Isoform_60048_37	chr16	-	3331	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	375.81810759994	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8121	False	NA	-4	True	AATAAA	-17	NA	4867716	4831768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866177_4866218_4866613_4866651_4867669
Isoform_6005_150	chr10	+	2802	7	FSM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	48	-6	4	6	multi-exon	FALSE	canonical	3	58	junction_6	14.3807355707403	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGATCTTTATCAAAAA	NA	False	NA	10	True	AATAAA	-22	NA	41326426	41341576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
Isoform_60052_2153	chr16	-	3301	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-5	-4	1	4	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	2153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8111	False	NA	-4	True	AATAAA	-17	NA	4867726	4831768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
Isoform_60066_6	chr16	-	6144	22	FSM	ENSMUSG00000039457.5	ENSMUST00000035672.5	6217	22	-86	159	-86	-159	multi-exon	FALSE	canonical	2	2	junction_13	2.19564607302829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACAGCAAGTATGACTC	NA	False	NA	NA	False	AATAAA	-21	NA	4950371	4904313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4907693_4909708_4909802_4910228_4910346_4911059_4911144_4912272_4912424_4914489_4914684_4915508_4915648_4915738_4915918_4917846_4918005_4918194_4918293_4919237_4919390_4920157_4920305_4920419_4920543_4922314_4922411_4922537_4922646_4922727_4922890_4923786_4923829_4923914_4924035_4924625_4924747_4925320_4925476_4930855_4930956_4950145
Isoform_60067_3	chr16	-	6290	22	FSM	ENSMUSG00000039457.5	ENSMUST00000035672.5	6217	22	-55	-18	-55	18	multi-exon	FALSE	canonical	2	2	junction_13	2.19564607302829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTATTGAGTTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	4950340	4904136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4907693_4909708_4909802_4910228_4910346_4911059_4911144_4912272_4912424_4914489_4914684_4915508_4915648_4915738_4915918_4917846_4918005_4918194_4918293_4919237_4919390_4920157_4920305_4920419_4920543_4922314_4922411_4922537_4922646_4922727_4922890_4923786_4923829_4923914_4924035_4924625_4924747_4925320_4925476_4930855_4930956_4950145
Isoform_60069_4	chr16	-	1975	9	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	39.3247695479579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCACCAGGGGGCG	NA	False	NA	NA	False	AATAAA	-12	NA	5021862	5013155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_5013836_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
Isoform_60072_286	chr16	-	2125	10	FSM	ENSMUSG00000023143.11	ENSMUST00000023911.11	2143	10	15	3	5	-3	multi-exon	FALSE	canonical	3	106	junction_1	7.98764478027175	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCACCAGGGGGCG	NA	False	NA	NA	False	AATAAA	-12	NA	5021861	5013155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
Isoform_60074_6	chr16	-	2275	9	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	53	-3	intron_retention	FALSE	canonical	3	106	junction_1	5.80947501931113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCACCAGGGGGCG	NA	False	NA	NA	False	AATAAA	-12	NA	5021813	5013155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017916_5019237_5019378_5021204_5021664_5021760
Isoform_60075_165	chr16	-	2134	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	34	2	7	-2	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	-4	True	NA	NA	NA	5073813	5062017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
Isoform_60082_8	chr16	-	2241	7	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	8	-2	intron_retention	FALSE	canonical	3	270	junction_1	79.2199820471802	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	-4	True	NA	NA	NA	5073839	5062017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_5063250_5065316_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
Isoform_60084_8	chr16	-	1501	7	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-2	2	intron_retention	FALSE	canonical	3	270	junction_1	79.2199820471802	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCCTGTCAGACAG	NA	False	NA	-3	True	AATAAA	-19	NA	5073822	5062740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_5063250_5065316_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
Isoform_60085_132	chr16	-	980	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	7	0	7	0	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTTCTCTTTCTGTGG	NA	False	NA	-2	True	NA	NA	NA	5073813	5065238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
Isoform_60087_30	chr16	-	4200	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	8	-3221	-7	-2	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	-4	True	NA	NA	NA	5073812	5062017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
Isoform_6009_33	chr10	+	2924	8	NNC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	7	6	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	38.0542040907387	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGATCTTTATCAAAAA	NA	False	NA	10	True	AATAAA	-22	NA	41326385	41341576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41339957_41340039_41340272
Isoform_60091_8	chr16	-	1060	6	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	438	junction_1	20.4215572373901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTTCTCTTTCTGTGG	NA	False	NA	-2	True	NA	NA	NA	5073812	5065238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
Isoform_60094_45	chr16	-	2715	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	26	650	26	-650	multi-exon	FALSE	canonical	3	58	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGTGGGTTAGTTC	NA	False	NA	NA	False	AATACA	-14	NA	8455550	8451742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_8454257_8455349
Isoform_60095_9	chr16	-	2985	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	-246	652	-246	-652	multi-exon	FALSE	canonical	3	58	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTTTGTGGGTTAGT	NA	False	NA	NA	False	AATACA	-12	NA	8455822	8451744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_8454257_8455349
Isoform_60097_8	chr16	-	3364	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	26	1	26	-1	multi-exon	FALSE	canonical	3	58	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGGGTTTTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	8455550	8451093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_8454257_8455349
Isoform_6010_5	chr10	+	3558	6	NIC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	-1	-62	intron_retention	FALSE	canonical	3	58	junction_5	15.7530949340122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTCCAAAGTATGAAAC	NA	False	NA	-58	True	ATTAAA	-13	NA	41326377	41341508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41332612_41338274_41338357_41340272
Isoform_60101_3	chr16	-	3650	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	-261	2	-261	-2	multi-exon	FALSE	canonical	3	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCAGGGTTTTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	8455837	8451094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_8454257_8455349
Isoform_60105_497	chr16	-	2867	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	1	-10	1	10	multi-exon	TRUE	canonical	3	300	junction_3	44.5146667465405	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGTGTGTGTAGTTC	NA	False	NA	-1	True	AATAAA	-31	NA	8490018	8476433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
Isoform_6011_18	chr10	+	3609	24	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	46.8391044035137	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTTATGCTCTGTGC	9115	False	NA	28	True	AATAAA	-17	NA	41352331	41363025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
Isoform_6014_591	chr10	+	3538	24	FSM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	23	2	1	-2	multi-exon	FALSE	canonical	3	135	junction_2	27.5095446574272	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9116	False	NA	27	True	AATAAA	-16	NA	41352332	41363024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
Isoform_60151_24	chr16	-	5281	32	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-490	-11	combination_of_known_junctions	FALSE	canonical	2	74	junction_30	229.957200922222	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6042	False	NA	NA	False	AATAAA	-10	NA	8556774	8507474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
Isoform_60163_14	chr16	-	6027	31	FSM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	-603	-1421	-525	870	multi-exon	FALSE	canonical	2	328	junction_30	128.088897081502	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTTCTTGTAGTGTTT	6007	False	NA	-6	True	ATTAAA	-14	NA	8556809	8506588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
Isoform_60169_107	chr16	-	4709	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8926	-11	at_least_one_novel_splicesite	FALSE	canonical	2	100	junction_31	169.206103657901	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8601246	8507474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
Isoform_60175_469	chr16	-	4800	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-63	8	-63	-3	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8610235	8507466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
Isoform_60183_209	chr16	-	3406	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	24	10	24	-10	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTTGGATAATTGTA	NA	False	NA	-15	True	ATTAAA	-21	NA	10131808	10099622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
Isoform_60186_11	chr16	-	1589	7	FSM	ENSMUSG00000039179.14	ENSMUST00000043415.13	1803	7	210	4	168	-4	multi-exon	FALSE	canonical	2	3	junction_5	2.40947204913349	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTCTTTAGGAAAATG	NA	False	NA	0	True	AATAAA	-18	NA	10213144	10175815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10176300_10179121_10179277_10196760_10196984_10200653_10200798_10203926_10203998_10205018_10205103_10212716
Isoform_60187_4	chr16	-	3304	7	FSM	ENSMUSG00000050908.13	ENSMUST00000051118.7	3315	7	6	5	6	-5	multi-exon	FALSE	canonical	2	5	junction_6	2.91070819942883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTGTATTTCTCATA	NA	False	NA	NA	False	AATAAA	-12	NA	10265220	10238425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10246522_10246668_10264793
Isoform_60188_7	chr16	-	3083	8	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	12	-5	intron_retention	FALSE	canonical	0	0	junction_7	3.92792202424786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTGTATTTCTCATA	NA	False	NA	NA	False	AATAAA	-12	NA	10265214	10238425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10246522_10246668_10264793_10264874_10265088
Isoform_60189_8	chr16	-	3149	6	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	16	-5	intron_retention	FALSE	canonical	1	2	junction_5	3.84707681233427	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTGTATTTCTCATA	NA	False	NA	NA	False	AATAAA	-12	NA	10265210	10238425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10264793
Isoform_60190_5	chr16	-	2934	7	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	16	-5	intron_retention	FALSE	canonical	0	0	junction_6	4.60675832036175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTGTATTTCTCATA	NA	False	NA	NA	False	AATAAA	-12	NA	10265210	10238425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10264793_10264874_10265088
Isoform_60191_102	chr16	-	1417	2	FSM	ENSMUSG00000038055.13	ENSMUST00000038281.6	1389	2	-30	2	-30	-2	multi-exon	FALSE	canonical	3	61	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTTTGCCTTGTCTG	NA	False	NA	-2	True	ATTAAA	-18	NA	10360948	10348072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10348677_10360135
Isoform_60193_33	chr16	-	1203	2	FSM	ENSMUSG00000038037.6	ENSMUST00000038099.6	2785	2	3	1579	3	-1579	multi-exon	FALSE	canonical	3	9	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAAACAAAGATTCC	NA	False	NA	NA	False	AATAAA	-22	NA	10603397	10601685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10602786_10603294
Isoform_60196_20	chr16	-	2153	5	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	-6	-222	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	169.812396485062	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGAAAGGCCTTGTGT	NA	False	NA	11	True	AATAAA	-38	NA	10810941	10777360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_10778916_10781120_10781278_10784288_10784514_10793290_10793475_10810909
Isoform_60198_467	chr16	-	1974	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	44	217	-6	-217	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCCTTGTGTTGTGT	NA	False	NA	16	True	AATAAA	-43	NA	10810941	10777355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
Isoform_60199_81	chr16	-	2192	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	44	-1	-6	1	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCCCCATTCATTCTC	NA	False	NA	-10	True	AATAAA	-14	NA	10810941	10777137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
Isoform_602_919	SIRV3	+	2372	3	FSM	SIRV3A	SIRV306	2373	3	1	0	1	0	multi-exon	FALSE	canonical	3	759	junction_2	1218.5	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1945	8292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_+_2006_4003_4081_6057
Isoform_6020_57	chr10	+	3400	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	52.4446973581861	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTTATGCTCTGTGC	9116	False	NA	28	True	AATAAA	-17	NA	41352332	41363025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
Isoform_60200_36	chr16	-	2078	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	-59	216	-59	-216	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCCTTGTGTTGTGTT	NA	False	NA	17	True	AATAAA	-44	NA	10811044	10777354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
Isoform_60207_177	chr16	-	3091	12	FSM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	-3	7	-3	-7	multi-exon	FALSE	canonical	3	63	junction_7	19.5329769897639	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTCGAATGTCATT	8531	False	NA	NA	False	AATAAA	-22	NA	10952517	10892781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_60211_36	chr16	-	2980	11	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	28.318898283655	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTCGAATGTCATT	8529	False	NA	NA	False	AATAAA	-22	NA	10952519	10892781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_60213_5	chr16	-	2838	10	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	6	-8	combination_of_known_splicesites	FALSE	canonical	2	10	junction_7	37.1317307985874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8540	False	NA	NA	False	AATAAA	-21	NA	10952508	10892782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10940533_10940632_10946350_10946568_10952131
Isoform_60214_22	chr16	-	4281	8	FSM	ENSMUSG00000022498.17	ENSMUST00000118362.8	4248	8	-44	11	-5	-11	multi-exon	FALSE	canonical	3	63	junction_3	22.088874288812	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAAAGCTTCTGGTCT	8529	False	NA	NA	False	AATAAA	-3	NA	10952519	10903393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_60216_9	chr16	-	4160	7	FSM	ENSMUSG00000022498.17	ENSMUST00000145225.8	2381	7	-76	-1703	1	-13	multi-exon	FALSE	canonical	3	19	junction_2	35.2120560162125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACAAAAAGCTTCTGGT	8535	False	NA	NA	False	AATAAA	-1	NA	10952513	10903395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_60218_4	chr16	-	2231	5	ISM	ENSMUSG00000022498.17	ENSMUST00000145225.8	2381	7	-79	16024	-2	1352	5prime_fragment	FALSE	canonical	3	91	junction_1	12.3364297914753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8532	False	NA	NA	False	NA	NA	NA	10952516	10921122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_6022_168	chr10	+	3331	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	71	junction_2	35.4241128130973	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTTATGCTCTGTGC	9116	False	NA	28	True	AATAAA	-17	NA	41352332	41363025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
Isoform_60220_19	chr16	-	1143	5	NIC	ENSMUSG00000022498.17	novel	1145	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	43.4798804046193	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGAACTCTTTATCTCT	8535	False	NA	NA	False	TTTAAA	-7	NA	10952513	10923819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10924136_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_60221_4	chr16	-	3825	23	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-21	-11	combination_of_known_junctions	FALSE	canonical	1	1	junction_22	40.2449113871802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTCATAGTTTTGGTG	NA	False	NA	-10	True	AATAAA	-17	NA	10993985	10954466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10993800
Isoform_60222_217	chr16	-	3764	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	53	8	1	-8	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994204	10954463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_60223_11	chr16	-	3703	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-3	-9	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	36.8186091171878	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10994209	10954464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_60224_11	chr16	-	4299	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-13	intron_retention	FALSE	canonical	3	105	junction_12	19.807348781693	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTTTCATAGTTTTGG	NA	False	NA	-12	True	AATAAA	-15	NA	10994204	10954468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_60225_23	chr16	-	5436	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	126	junction_3	16.4233827209866	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10994209	10954464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_60227_4	chr16	-	3613	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	25	-8	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	44.7991739476807	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994180	10954463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_60228_6	chr16	-	4241	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-9	intron_retention	FALSE	canonical	3	32	junction_4	33.0351973361527	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10994204	10954464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_60229_9	chr16	-	5371	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	0	-8	intron_retention	FALSE	canonical	3	32	junction_4	32.0850042854914	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994205	10954463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_60231_21	chr16	-	2921	9	ISM	ENSMUSG00000037965.16	ENSMUST00000140755.9	2763	22	1	13345	1	29	5prime_fragment	FALSE	canonical	3	158	junction_3	8.61593726764535	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	10994204	10972017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_60242_333	chr16	-	1919	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	24	2	24	-2	multi-exon	FALSE	canonical	0	0	junction_8	907.175424049836	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCGCTGTACTGTTGGTA	978	False	NA	-5	True	ATTAAA	-23	NA	11021171	11010835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
Isoform_60243_3865	chr16	-	1896	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	47	2	-20	-2	multi-exon	FALSE	canonical	0	0	junction_8	907.175424049836	3865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCGCTGTACTGTTGGTA	1001	False	NA	-5	True	ATTAAA	-23	NA	11021148	11010835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
Isoform_60275_750	chr16	-	2572	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	36	1108	-25	1	multi-exon	FALSE	canonical	3	573	junction_12	261.982473319363	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCGGTATTTGAATT	NA	False	NA	-16	True	AATAAA	-14	NA	11072098	11038263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
Isoform_60281_67	chr16	-	2669	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	-61	1108	-6	1	multi-exon	FALSE	canonical	3	573	junction_12	261.982473319363	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCGGTATTTGAATT	NA	False	NA	-16	True	AATAAA	-14	NA	11072195	11038263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
Isoform_60298_341	chr16	-	2672	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-122	348	-6	1	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCGGTATTTGAATT	NA	False	NA	-16	True	AATAAA	-14	NA	11072195	11038263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
Isoform_6030_3377	chr10	+	2886	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	29	7	29	-7	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	3377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	False	NA	13	True	AATAAA	-18	NA	41395438	41407037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
Isoform_60301_813	chr16	-	2621	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-71	348	-10	1	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCGGTATTTGAATT	NA	False	NA	-16	True	AATAAA	-14	NA	11072144	11038263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
Isoform_60341_158	chr16	-	2681	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	15	-33	-10	33	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGTGCTGTTTCTGA	NA	False	NA	-7	True	NA	NA	NA	11727272	11621551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
Isoform_60345_4	chr16	-	1893	3	FSM	ENSMUSG00000065979.13	ENSMUST00000073371.7	1922	3	30	-1	7	1	multi-exon	FALSE	canonical	2	5	junction_1	40	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACATTGCTTCTTAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	11727279	11702085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_11703610_11705441_11705661_11727129
Isoform_60349_13	chr16	-	1278	3	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	117849	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	188.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGCCTTTAACTGTTCT	NA	False	NA	-8	True	ATTAAA	-15	NA	13367997	13355824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_13356767_13358918_13359113_13367855
Isoform_60355_696	chr16	-	2888	24	FSM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	16	2	-5	-2	multi-exon	FALSE	canonical	1	121	junction_21	52.0035988284976	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGCCTTTAACTGTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	13486018	13355825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
Isoform_60366_22	chr16	-	3228	24	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_22	39.8562160573743	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGTTTGTCTGTCTT	9984	False	NA	-6	True	NA	NA	NA	13720995	13652012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702493_13705560_13705635_13720778
Isoform_60368_5	chr16	-	3731	24	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	-2	6	at_least_one_novel_splicesite	TRUE	canonical	3	58	junction_22	39.8562160573743	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTGTCTCTGAACATT	9768	False	NA	NA	False	ATTAAA	-15	NA	13720921	13651435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702493_13705560_13705635_13720778
Isoform_60371_223	chr16	-	3187	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	36	1005	-36	2	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGCTGTTTGTCTG	9734	False	NA	-10	True	NA	NA	NA	13720955	13652016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_60373_15	chr16	-	2827	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	2	1399	2	-271	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCTTCCCTGTGCACT	9990	False	NA	NA	False	NA	NA	NA	13720989	13652410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_60374_34	chr16	-	3773	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	26	429	26	1	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGTCTGTCTCTGA	9724	False	NA	NA	False	ATTAAA	-10	NA	13720965	13651440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_60379_16	chr16	-	2997	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	-110	-7	0	2	multi-exon	FALSE	canonical	3	10	junction_1	45.2457020469238	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGCTGTTTGTCTG	9984	False	NA	-10	True	NA	NA	NA	13720995	13652016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_60384_7	chr16	-	3151	23	FSM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	-141	168	4	47	multi-exon	FALSE	canonical	3	195	junction_15	13.5268328374224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCTTCCTGACCATAT	9992	False	NA	NA	False	AATAGA	-15	NA	13720987	13653623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_60390_11	chr16	-	1225	11	ISM	ENSMUSG00000022680.15	ENSMUST00000115802.2	2466	14	20	9494	16	794	5prime_fragment	FALSE	canonical	3	195	junction_3	12.7342059037853	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTCTACTTCTGTTGCC	10004	False	NA	NA	False	AATAAA	-16	NA	13720975	13676634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_60391_3	chr16	-	3593	8	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	16374	-2	at_least_one_novel_splicesite	TRUE	non_canonical	2	8	junction_1	12.7775312999988	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATGAGTGCTTTT	NA	False	NA	-8	True	AATAAA	-14	NA	13944030	13927038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_13927935_13927956_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805
Isoform_60395_22	chr16	-	3121	10	ISM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	-4	31800	-4	-6	5prime_fragment	TRUE	canonical	3	10	junction_6	4.47213595499958	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATTAAAAAAGAAAAAA	9812	False	NA	NA	False	NA	NA	NA	13977135	13958836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
Isoform_60396_4	chr16	-	3825	9	NIC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	10	junction_6	4.57575130443078	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAATTAAAAAAGAAA	9814	False	NA	NA	False	NA	NA	NA	13977133	13958839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13970577_13971695_13971896_13977007
Isoform_60397_12	chr16	-	2249	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	32	-816	1	816	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGCTTTATGCATTCC	NA	False	NA	-5	True	ATTAAA	-17	NA	14135207	14116291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
Isoform_60398_143	chr16	-	1432	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	31	2	0	-2	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	14135208	14117109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
Isoform_60405_5	chr16	-	1250	4	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	177.216126680264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	14135224	14117109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_14118074_14122317_14122452_14128910_14128996_14135157
Isoform_60406_6	chr16	-	1346	4	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	175.075856575244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTATGGTCATGGTC	NA	False	NA	-5	True	NA	NA	NA	14135206	14117108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_14118074_14122317_14122452_14131679_14131878_14135157
Isoform_60407_49	chr16	-	1150	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	0	-3	0	-1	multi-exon	FALSE	canonical	3	67	junction_2	185.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTATGGTCATGGTC	NA	False	NA	-5	True	NA	NA	NA	14135208	14117108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_14118074_14122317_14122452_14135157
Isoform_60408_8	chr16	-	1985	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	-19	-819	12	815	multi-exon	FALSE	canonical	3	67	junction_2	185.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGCTTTATGCATTC	NA	False	NA	-6	True	ATTAAA	-16	NA	14135227	14116292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_14118074_14122317_14122452_14135157
Isoform_60409_5	chr16	-	1299	2	ISM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	13	13540	13	1	5prime_fragment	FALSE	canonical	3	312	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGGAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	14135226	14130647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_14131878_14135157
Isoform_60414_139	chr16	-	3415	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	27	765	-7	-765	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTTTCTAGAATTTTT	NA	False	NA	0	True	AATAAA	-28	NA	15412361	15371305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
Isoform_60416_47	chr16	-	4176	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	26	5	-8	-5	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATATTTTGTGTGTGC	NA	False	NA	-9	True	AATAAA	-12	NA	15412362	15370545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
Isoform_60417_740	chr16	-	1181	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	27	2999	-7	-171	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTGTGCTATTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	15412361	15373539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
Isoform_60418_46	chr16	-	4517	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	27	-337	-7	-263	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATGAAGACCATTT	NA	False	NA	NA	False	AATAAA	-20	NA	15412361	15370203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
Isoform_60419_167	chr16	-	3291	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	27	889	-7	-889	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTCCAGTAGGTCCC	NA	False	NA	-45	True	AATAAA	-16	NA	15412361	15371429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
Isoform_60422_10	chr6	+	1102	1	FSM	ENSMUSG00000079224.6	ENSMUST00000121217.2	438	1	-23	-641	-23	641	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAATAGGTGTATGG	NA	False	NA	NA	False	AGTAAA	-32	NA	100581620	100582722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr6_+_100581600_100582700
Isoform_60432_70	chr16	-	1054	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	10	172	-7	-172	multi-exon	FALSE	canonical	3	117	junction_1	698.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGACTGTGCTATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	15412361	15373540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15374408_15398922_15399072_15412323
Isoform_60461_3398	chr16	-	3289	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	87	213	87	0	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	3398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAATACTTGGTTTAAA	NA	False	NA	-8	True	AATAAA	-8	NA	15455177	15441973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
Isoform_60462_136	chr16	-	3379	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	-3	213	-3	0	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAATACTTGGTTTAAA	NA	False	NA	-8	True	AATAAA	-8	NA	15455267	15441973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
Isoform_60463_73	chr16	-	3532	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	54	3	54	-3	multi-exon	TRUE	canonical	3	1276	junction_6	130.715909088714	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATATGAAGTAGGCATTA	NA	False	NA	NA	False	AATAAA	-17	NA	15455210	15441763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
Isoform_6047_102	chr10	+	3566	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	243	0	243	0	multi-exon	FALSE	canonical	3	40	junction_1	18.7662686623146	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	235	False	NA	8	True	AATAAA	-15	NA	41686173	41784420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
Isoform_60476_7	chr16	-	688	4	FSM	ENSMUSG00000022671.14	ENSMUST00000229680.2	1066	4	381	-3	-207	0	multi-exon	FALSE	canonical	2	7	junction_2	282.609664063744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15680793	15666306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15666594_15678561_15678635_15680261_15680408_15680611
Isoform_60477_297	chr16	-	626	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	407	2	-218	0	multi-exon	FALSE	canonical	3	566	junction_1	21	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15680804	15666306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15666594_15680261_15680408_15680611
Isoform_60478_48	chr16	-	997	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	36	2	-1	0	multi-exon	FALSE	canonical	3	566	junction_1	21	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15681175	15666306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15666594_15680261_15680408_15680611
Isoform_60479_45	chr16	-	1035	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	-2	2	-2	0	multi-exon	FALSE	canonical	3	566	junction_1	21	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15681213	15666306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15666594_15680261_15680408_15680611
Isoform_60481_6	chr16	-	1123	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	-93	5	-71	0	multi-exon	FALSE	canonical	3	566	junction_1	21	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTATGTGGAGTCCT	NA	False	NA	-7	True	ATTAAA	-17	NA	15681304	15666309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15666594_15680261_15680408_15680611
Isoform_60483_36	chr16	-	718	4	FSM	ENSMUSG00000022671.14	ENSMUST00000117136.2	758	4	47	-7	-12	0	multi-exon	FALSE	canonical	3	85	junction_3	237.265439727089	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15681186	15666306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15666594_15680261_15680408_15680611_15680797_15681086
Isoform_60489_695	chr16	-	3247	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	33	2	-14	-2	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGTGGTTTTAGTG	1980	False	NA	-2	True	AATAAA	-16	NA	15964682	15707089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
Isoform_6049_22	chr10	+	3788	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	21	0	21	0	multi-exon	FALSE	canonical	3	40	junction_1	18.7662686623146	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	13	True	NA	8	True	AATAAA	-15	NA	41685951	41784420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
Isoform_60492_27	chr16	-	3191	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_17	72.4806487584407	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGTGGTTTTAGTG	1969	False	NA	-2	True	AATAAA	-16	NA	15964693	15707089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15958571_15958728_15964608
Isoform_605_1070	SIRV3	+	2017	3	FSM	SIRV3A	SIRV303	2018	3	1	0	1	0	multi-exon	FALSE	canonical	3	1857	junction_1	482	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1964	7822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_+_2006_4568_4780_6057
Isoform_6051_78	chr10	+	2599	10	FSM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	1	0	1	0	multi-exon	FALSE	canonical	3	34	junction_1	20.085619202938	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	NA	False	NA	8	True	AATAAA	-15	NA	41763435	41784420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
Isoform_60511_589	chr16	-	4060	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176828	16130100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_60514_26	chr16	-	4092	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTGAATTCTTTCTG	NA	False	NA	-16	True	AATAAA	-20	NA	16176862	16130102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_60529_391	chr16	-	3982	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176828	16130100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_6053_1613	chr10	+	1190	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	211	0	-48	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378237	42411366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
Isoform_6054_83	chr10	+	1393	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	8	0	8	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378034	42411366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
Isoform_60544_44	chr16	-	4056	19	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTCTGATGTGCTTC	NA	False	NA	-7	True	AATAAA	-29	NA	16176850	16130093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_60545_97	chr16	-	2874	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCCTGAAAATTTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	16176826	16131251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_60558_186	chr16	-	3948	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	-5	8	-5	0	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176828	16130101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_6056_780	chr10	+	1257	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	143	1	-116	-1	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTGTGCTCTGGTTG	NA	False	NA	11	True	AATAAA	-12	NA	42378169	42411365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
Isoform_60571_6	chr16	-	3371	17	FSM	ENSMUSG00000022788.17	ENSMUST00000162671.8	2714	17	-73	-584	-12	584	multi-exon	FALSE	canonical	2	6	junction_7	4.09219913371771	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTGCCTGTATATAATA	NA	False	NA	NA	False	AATAAA	-18	NA	16417915	16239842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16417641
Isoform_60572_5	chr16	-	8461	17	FSM	ENSMUSG00000022788.17	ENSMUST00000162671.8	2714	17	-102	-5645	-41	-1	multi-exon	TRUE	canonical	2	6	junction_7	4.09219913371771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGAGCCTTGGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	16417944	16234781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16417641
Isoform_60573_9	chr16	-	2415	11	FSM	ENSMUSG00000022783.12	ENSMUST00000023468.6	2416	11	-5	6	2	-6	multi-exon	FALSE	canonical	1	1	junction_3	2.24722050542442	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATTAGAATGGTCCCT	NA	False	NA	NA	False	AATAAA	-10	NA	16647182	16570885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16571742_16580885_16581032_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360_16610528_16646883_16646980_16647058
Isoform_60574_4	chr16	-	639	2	FSM	ENSMUSG00000059305.13	ENSMUST00000075017.5	766	2	128	-1	90	1	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTCTGGCTGGTTTGT	NA	False	NA	0	True	ATTAAA	-15	NA	16686991	16686265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16686843_16686929
Isoform_60575_5	chr16	-	752	2	FSM	ENSMUSG00000059305.13	ENSMUST00000232670.2	415	2	-19	-318	-19	1	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTCTGGCTGGTTTGT	NA	False	NA	0	True	ATTAAA	-15	NA	16688726	16686265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16686843_16688551
Isoform_60579_58	chr16	-	2301	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	25	7	0	-6	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAAGTGGCGTTCATGA	NA	False	NA	NA	False	AATAAA	-12	NA	16929096	16904425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
Isoform_60586_756	chr16	-	1741	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	11	1336	1	-1	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGGGTCCAGTTTGAG	NA	False	NA	-36	True	AATAAA	-12	NA	16929095	16906515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
Isoform_60587_215	chr16	-	1792	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	10	1286	0	4	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGCCGTGGTCTCTGC	NA	False	NA	0	True	NA	NA	NA	16929096	16906465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
Isoform_60596_36	chr16	-	1127	7	NNC	ENSMUSG00000049916.13	novel	1266	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_6	94.3705756873166	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16942999	16931261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942878
Isoform_60597_39	chr16	-	1297	8	FSM	ENSMUSG00000049916.13	ENSMUST00000093336.8	1266	8	-31	0	3	0	multi-exon	FALSE	canonical	3	35	junction_7	117.062516003464	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943001	16931261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16941375_16941519_16942853
Isoform_60598_186	chr16	-	1152	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	5	-1	5	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16942999	16931261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
Isoform_60599_28	chr16	-	1176	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	-19	-1	8	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943023	16931261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
Isoform_60602_17	chr16	-	1368	6	NIC	ENSMUSG00000049916.13	novel	1266	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	255	junction_4	29.3011945148999	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16942999	16931261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16939416_16942853
Isoform_60603_4	chr16	-	931	6	NIC	ENSMUSG00000049916.13	novel	1266	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	113.851833538156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16942999	16931261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_16931491_16935343_16935449_16935657_16935729_16938819_16938944_16939159_16939416_16942853
Isoform_60605_287	chr16	-	1064	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	43	1	43	-1	multi-exon	FALSE	canonical	2	125	junction_1	37.5	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGAGTGCATGAGATGT	NA	False	NA	-11	True	AATAAA	-17	NA	16950204	16948002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16948653_16949460_16949658_16949987
Isoform_60607_3	chr16	-	831	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	21	256	21	-256	multi-exon	FALSE	canonical	2	125	junction_1	37.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTATTTTTGCTGTAACC	NA	False	NA	-4	True	ATTAAA	-14	NA	16950226	16948257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16948653_16949460_16949658_16949987
Isoform_60614_684	chr16	-	2594	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	15	0	-4	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTGTATGGGTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	17019341	16969878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
Isoform_60617_785	chr16	-	680	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	19	1910	0	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTTGCTTTGTTTTA	NA	False	NA	-19	True	ATTAAA	-17	NA	17019337	16971788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
Isoform_60631_170	chr16	-	6599	55	FSM	ENSMUSG00000041720.15	ENSMUST00000232232.2	6630	55	31	0	31	0	multi-exon	FALSE	canonical	3	103	junction_39	24.3659232686811	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223726	17098215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
Isoform_60632_37	chr16	-	6621	55	FSM	ENSMUSG00000041720.15	ENSMUST00000232232.2	6630	55	9	0	9	0	multi-exon	FALSE	canonical	3	103	junction_39	24.3659232686811	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223748	17098215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
Isoform_60634_33	chr16	-	1118	8	FSM	ENSMUSG00000041720.15	ENSMUST00000231419.2	3855	8	41	2696	41	-2696	multi-exon	FALSE	canonical	3	160	junction_3	18.7442508192648	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTTGCTTCTGTTGT	NA	False	NA	-2	True	AATAAA	-24	NA	17223716	17185217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
Isoform_60635_3	chr16	-	1287	3	ISM	ENSMUSG00000022760.18	ENSMUST00000231424.2	895	4	73	-167	34	-6	intron_retention	FALSE	canonical	3	101	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7604	False	NA	-5	True	AATAAA	-13	NA	17348582	17345947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_17346605_17346798_17346940_17348093
Isoform_60636_3	chr16	-	983	4	ISM	ENSMUSG00000022760.18	ENSMUST00000232114.2	1120	5	406	-102	-25	-6	3prime_fragment	FALSE	canonical	2	7	junction_3	48.8148429157453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7616	False	NA	-5	True	AATAAA	-13	NA	17348570	17345947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348541
Isoform_60637_11	chr16	-	1029	4	FSM	ENSMUSG00000022760.18	ENSMUST00000231424.2	895	4	33	-167	-6	-6	multi-exon	FALSE	canonical	3	18	junction_3	43.6882898116494	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7564	False	NA	-5	True	AATAAA	-13	NA	17348622	17345947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348547
Isoform_60638_6	chr16	-	1168	5	NIC	ENSMUSG00000022760.18	novel	1248	5	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	40.9206549312202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7258	False	NA	-5	True	AATAAA	-13	NA	17348928	17345947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17346605_17346798_17346940_17348093_17348250_17348547_17348722_17348888
Isoform_60639_17	chr16	-	1218	4	FSM	ENSMUSG00000022760.18	ENSMUST00000231288.2	734	4	14	-498	-3	-6	multi-exon	FALSE	canonical	3	86	junction_3	13.0724477007517	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7281	False	NA	-5	True	AATAAA	-13	NA	17348905	17345947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641
Isoform_60641_10	chr16	-	1121	5	FSM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	-17	6	-9	-6	multi-exon	FALSE	canonical	3	10	junction_4	41.2757495389242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7258	False	NA	-5	True	AATAAA	-13	NA	17348928	17345947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348841
Isoform_60642_35	chr16	-	1073	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	72	103	-9	-7	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGACTGCTGTTTGGCT	7258	False	NA	-6	True	AATAAA	-12	NA	17348928	17345948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
Isoform_60643_16	chr16	-	1153	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	-2	97	-2	-1	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTTTGGCTTGGCTG	7184	False	NA	0	True	AATAAA	-18	NA	17349002	17345942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
Isoform_60644_3	chr16	-	1471	4	NIC	ENSMUSG00000022760.18	novel	1248	5	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	43	junction_3	32.1074584619974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTTTGGCTTGGCTG	7258	False	NA	0	True	AATAAA	-18	NA	17348928	17345942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17346605_17346798_17346940_17348093_17348722_17348888
Isoform_60645_7	chr16	-	1087	3	NIC	ENSMUSG00000022760.18	novel	734	4	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	9	junction_2	46	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7256	False	NA	-5	True	AATAAA	-13	NA	17348930	17345947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17346605_17346798_17346940_17348641
Isoform_60646_7	chr16	-	946	2	FSM	ENSMUSG00000022760.18	ENSMUST00000232041.2	766	2	-14	-166	-11	-6	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7256	False	NA	-5	True	AATAAA	-13	NA	17348930	17345947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17346605_17348641
Isoform_60647_3	chr16	-	2412	6	NIC	ENSMUSG00000022756.18	novel	1920	7	NA	NA	5	1	intron_retention	FALSE	canonical	1	1	junction_4	6.71118469422501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTACACTGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	17394530	17390818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17393944_17394068_17394503
Isoform_60648_12	chr16	-	2303	5	FSM	ENSMUSG00000022756.18	ENSMUST00000172164.10	3281	5	50	928	0	4	multi-exon	FALSE	canonical	3	3	junction_4	5.33853912601566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGGTATTCTTCATAG	NA	False	NA	NA	False	NA	NA	NA	17394535	17390809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17394503
Isoform_60650_6	chr16	-	2283	5	NIC	ENSMUSG00000022756.18	novel	1714	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	2	junction_4	5.76085931090146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCATGTACACTGTGGT	NA	False	NA	NA	False	NA	NA	NA	17394523	17390820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393833_17394503
Isoform_60651_4	chr16	-	2699	5	NIC	ENSMUSG00000022756.18	novel	2577	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1	junction_3	7.25861557047899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCATGTACACTGTGGT	NA	False	NA	NA	False	NA	NA	NA	17394535	17390820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17391317_17391419_17392451_17392815_17393833_17393944_17394068_17394503
Isoform_60655_28	chr16	-	3446	19	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_18	83.3667525581917	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTATTGCATCTACCT	NA	False	NA	-16	True	AATAAA	-23	NA	17540765	17469077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17524262_17524348_17540619
Isoform_60656_334	chr16	-	3361	18	FSM	ENSMUSG00000012114.18	ENSMUST00000012259.9	3410	18	46	3	-1	-3	multi-exon	FALSE	canonical	3	173	junction_13	36.2216360814255	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTATTGCATCTACCT	NA	False	NA	-16	True	AATAAA	-23	NA	17540765	17469077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
Isoform_60660_8	chr16	-	3234	18	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	92.8940684784422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGGAGTTTATTGCAT	NA	False	NA	-22	True	AATAAA	-17	NA	17540772	17469083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17524262_17524348_17540619
Isoform_60661_136	chr16	-	3166	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	54.6468420290688	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTATTGCATCTACCT	NA	False	NA	-16	True	AATAAA	-23	NA	17540783	17469077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
Isoform_60665_52	chr16	-	3241	17	FSM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	-4	-7	-1	-3	multi-exon	FALSE	canonical	3	37	junction_9	64.8068946467118	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTATTGCATCTACCT	NA	False	NA	-16	True	AATAAA	-23	NA	17540765	17469077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
Isoform_60666_15	chr16	-	3035	16	NIC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	1	-1	combination_of_known_junctions	TRUE	canonical	3	37	junction_9	78.1211594611572	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	-14	True	AATAAA	-25	NA	17540770	17469075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
Isoform_60674_29	chr16	-	4042	11	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-11	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	165.185986088409	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATGGTCAGTTCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	17709535	17658222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_17658451_17658476_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
Isoform_60677_29	chr16	-	4091	11	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	189.025104152861	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCATGGTCAGTTCT	NA	False	NA	-8	True	AATAAA	-12	NA	17709577	17658224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_17658451_17658476_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
Isoform_6068_536	chr10	+	3004	6	FSM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	-1	3	-1	-3	multi-exon	FALSE	canonical	3	210	junction_2	7.54718490564528	536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTAATGTTGTAATTG	NA	False	NA	6	True	AATAAA	-15	NA	42554910	42578452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
Isoform_60687_668	chr16	-	3982	11	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.563468059196	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCATGGTCAGTTCT	NA	False	NA	-8	True	AATAAA	-12	NA	17709535	17658224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_17658451_17658476_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
Isoform_60696_444	chr16	-	4040	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	1	4	1	2	multi-exon	FALSE	non_canonical	0	0	junction_7	135.772503989233	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATGGTCAGTTCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	17709556	17658222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
Isoform_60697_127	chr16	-	4019	11	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.898292381917	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATGGTCAGTTCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	17709561	17658222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_17658451_17658476_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
Isoform_60704_57	chr16	-	1437	7	ISM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-38	9027	-5	-71	5prime_fragment	FALSE	canonical	3	236	junction_4	83.6932228770977	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACTGTTTACAGTTTAA	NA	False	NA	-2	True	AATAAA	-17	NA	17709562	17667245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
Isoform_60706_30	chr16	-	1458	7	FSM	ENSMUSG00000003166.21	ENSMUST00000155611.8	1468	7	-60	70	-16	-70	multi-exon	FALSE	non_canonical	0	0	junction_4	165.862392763801	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGTTTACAGTTTAAC	NA	False	NA	-1	True	AATAAA	-18	NA	17709573	17667244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
Isoform_60708_5	chr16	-	3141	10	NNC	ENSMUSG00000003527.10	novel	2785	10	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	61.7085943551135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTATTTTTCTATCAAT	NA	False	NA	-3	True	NA	NA	NA	17729209	17718575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17728696
Isoform_60709_120	chr16	-	2806	10	FSM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	-22	1	11	-1	multi-exon	FALSE	canonical	3	90	junction_7	33.1126025018337	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTTTTCTATCAATTG	NA	False	NA	-1	True	NA	NA	NA	17729201	17718573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
Isoform_60711_198	chr16	-	2791	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	29	1	-4	-1	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTTTTCTATCAATTG	NA	False	NA	-1	True	NA	NA	NA	17729183	17718573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
Isoform_60716_29	chr16	-	1115	3	FSM	ENSMUSG00000022738.8	ENSMUST00000012279.6	1172	3	53	4	53	-4	multi-exon	FALSE	canonical	3	24	junction_2	2.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTCCAGGATTTCAAG	NA	False	NA	NA	False	AATAAA	-21	NA	17732870	17730974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17731583_17732229_17732484_17732617
Isoform_60723_89	chr16	-	1671	8	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	327	1	-5	-1	3prime_fragment	FALSE	canonical	3	1746	junction_4	80.7002516244212	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17745756	17743087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408
Isoform_60728_1883	chr16	-	1626	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	40	0	30	0	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	1883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746043	17743086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
Isoform_60730_132	chr16	-	1685	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	-19	0	-19	0	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746102	17743086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
Isoform_6074_152	chr10	+	2719	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	81	3232	-38	-1	multi-exon	TRUE	canonical	3	208	junction_15	23.0789947788026	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTGGGCTGTGCAT	NA	False	NA	22	True	AATAAA	-22	NA	42637572	42705278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
Isoform_60745_523	chr16	-	2253	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	129	4	0	-3	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCACCTTTCTCTTGGT	8072	False	NA	-4	True	AATAAA	-16	NA	17907027	17889592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
Isoform_60747_13	chr16	-	2652	13	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-2	intron_retention	FALSE	canonical	3	102	junction_5	12.5063872570068	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACCTTTCTCTTGGTA	8072	False	NA	-3	True	AATAAA	-17	NA	17907027	17889591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898940_17899394_17899430_17902410_17902620_17906751
Isoform_60749_13	chr16	-	2829	12	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-5	intron_retention	FALSE	canonical	3	102	junction_5	11.3705433554579	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCATCACCTTTCTCTTG	8072	False	NA	-6	True	AATAAA	-14	NA	17907027	17889594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898940_17899394_17899430_17902410_17902620_17906751
Isoform_60751_6	chr16	-	2160	13	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	37.2566176075547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCACCTTTCTCTTGGT	8072	False	NA	-4	True	AATAAA	-16	NA	17907027	17889592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
Isoform_60752_7	chr16	-	826	2	FSM	ENSMUSG00000003526.13	ENSMUST00000132241.2	687	2	-141	2	0	-2	multi-exon	FALSE	canonical	3	130	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAATTGTCTTTTCAATT	8072	False	NA	NA	False	NA	NA	NA	17907027	17902069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_17902620_17906751
Isoform_60753_97	chr16	-	3392	11	FSM	ENSMUSG00000060166.7	ENSMUST00000076957.7	4868	11	1	1475	1	-710	multi-exon	FALSE	canonical	3	49	junction_5	10.6494131293701	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGCCTTTCCTTGGGC	NA	False	NA	0	True	AAAAAG	-10	NA	18052999	18040091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
Isoform_60774_7390	chr16	-	1056	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	29	0	29	0	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	7390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	7162	False	NA	-1	True	AATAAA	-22	NA	18066567	18057647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
Isoform_6079_87	chr10	+	3805	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	100	2127	-19	-5	multi-exon	FALSE	canonical	3	208	junction_15	23.0789947788026	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAATTTTTTGTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	42637591	42706383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
Isoform_60801_10	chr16	-	4376	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	65.4459194094402	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGTTTCTTTCTTCT	NA	False	NA	-1	True	CATAAA	-16	NA	18107104	18071812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
Isoform_60803_6	chr16	-	4452	12	FSM	ENSMUSG00000022718.13_ENSMUSG00000093246.3	ENSMUST00000115633.3	3436	12	-25	-991	3	-1	multi-exon	TRUE	canonical	3	159	junction_9	19.9238218644403	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGTTTCTTTCTTCT	NA	False	NA	-1	True	CATAAA	-16	NA	18102424	18071812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
Isoform_60811_98	chr16	-	4313	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	6	1	6	-1	multi-exon	FALSE	canonical	3	133	junction_13	25.6660390814434	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGTTTCTTTCTTCT	NA	False	NA	-1	True	CATAAA	-16	NA	18107104	18071812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
Isoform_60815_12	chr16	-	4248	14	NIC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	51.7107338953916	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGGTTTCTTTCTTC	NA	False	NA	-2	True	CATAAA	-15	NA	18107105	18071813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107031
Isoform_60817_9	chr16	-	2912	11	ISM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	42	5067	27	558	5prime_fragment	FALSE	canonical	3	133	junction_10	23.0800779894696	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTGAAGATTAGTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	18107068	18076878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
Isoform_60819_4	chr16	-	1570	9	NNC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	159	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	79.1355640657221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGTTGGCTTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	18161602	18118690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161506
Isoform_60820_4	chr16	-	1589	10	NNC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	99.7663938074006	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTGGCTTTTTCTA	NA	False	NA	-5	True	AATAAA	-15	NA	18161777	18118689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161506_18161602_18161758
Isoform_60821_62	chr16	-	1581	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_8	63.9256159532311	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTGGCTTTTTCTA	NA	False	NA	-5	True	AATAAA	-15	NA	18161767	18118689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161661
Isoform_60822_147	chr16	-	1491	9	FSM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	132	-1	-4	-1	multi-exon	FALSE	canonical	3	71	junction_8	57.8273291792038	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTGGCTTTTTCTA	NA	False	NA	-5	True	AATAAA	-15	NA	18161774	18118689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
Isoform_60823_31	chr16	-	1648	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	40	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	76.5371641753207	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTGGCTTTTTCTA	NA	False	NA	-5	True	AATAAA	-15	NA	18165907	18118689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18165734
Isoform_60824_4	chr16	-	1601	9	NIC	ENSMUSG00000013539.15	novel	1495	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	92.1222014500305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTGTTGGCTTTTTC	NA	False	NA	-7	True	AATAAA	-13	NA	18161770	18118691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_18119417_18120549_18120655_18121546_18121720_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161661
Isoform_6083_6	chr10	+	2710	21	NIC	ENSMUSG00000019802.14	novel	6032	21	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_15	52.0279732451688	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTGGGCTGTGCAT	NA	False	NA	22	True	AATAAA	-22	NA	42637578	42705278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688663_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
Isoform_60830_86	chr16	-	1159	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	225	13	225	-13	multi-exon	FALSE	canonical	3	117	junction_5	48.2825020064205	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGGAGATTTAAAAAAA	4113	False	NA	NA	False	NA	NA	NA	18245129	18226306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
Isoform_60831_66	chr16	-	1315	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	83	-1	83	1	multi-exon	TRUE	canonical	3	117	junction_5	48.2825020064205	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGGGGA	3971	False	NA	NA	False	AAAAAG	-10	NA	18245271	18226292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
Isoform_60832_23	chr16	-	1346	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	38	13	38	-13	multi-exon	FALSE	canonical	3	117	junction_5	48.2825020064205	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGGAGATTTAAAAAAA	3926	False	NA	NA	False	NA	NA	NA	18245316	18226306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
Isoform_60835_73	chr16	-	1289	5	FSM	ENSMUSG00000000326.14	ENSMUST00000115609.10	1866	5	286	291	38	-13	multi-exon	FALSE	canonical	3	108	junction_4	51.7656981021216	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGGAGATTTAAAAAAA	3926	False	NA	NA	False	NA	NA	NA	18245316	18226306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
Isoform_60840_5	chr16	-	1853	7	FSM	ENSMUSG00000009097.11	ENSMUST00000232335.2	2511	7	-78	736	-78	-11	multi-exon	FALSE	canonical	1	1	junction_4	1.7950549357115	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATTGCCGGTGTGGCTA	7662	False	NA	NA	False	CATAAA	-17	NA	18405797	18400464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18401207_18401473_18401575_18401656_18401725_18402168_18402325_18402833_18403006_18403784_18403887_18405285
Isoform_60841_4	chr16	-	2148	12	FSM	ENSMUSG00000072214.8	ENSMUST00000096987.7	2143	12	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_5	0.98752549920002	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCGAGTGTCCGAGTGTT	NA	False	NA	-2	True	NA	NA	NA	18448709	18440560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18441547_18441664_18441768_18441854_18441991_18442070_18442168_18442860_18442963_18443096_18443215_18443332_18443468_18443558_18443683_18443918_18444006_18444094_18444192_18448400_18448412_18448557
Isoform_60850_1042	chr16	-	1900	19	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	332	5	-14	1	3prime_fragment	TRUE	canonical	3	368	junction_7	53.1151788307469	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCTGGGTCTGTGATC	NA	False	NA	-7	True	AATAAA	-16	NA	18630390	18599201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
Isoform_60856_38	chr16	-	1761	18	FSM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	-14	0	-14	0	multi-exon	FALSE	canonical	3	21	junction_15	122.52143375795	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630390	18599202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18629138_18629232_18630054_18630115_18630264
Isoform_6086_170	chr10	+	2134	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	61	junction_4	6.25316246521123	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	43097474	43316598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
Isoform_60861_132	chr16	-	847	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	228	205	-25	3	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTATCTGTCTTTTGTTT	NA	False	NA	-21	True	AATAAA	-10	NA	18695384	18690972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
Isoform_60862_252	chr16	-	949	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	326	5	3	-5	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATCTGTCGTTTATTT	NA	False	NA	-12	True	AATAAA	-10	NA	18695286	18690772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
Isoform_60863_441	chr16	-	754	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	327	199	4	9	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTTTGTTTTGTTTT	NA	False	NA	-15	True	AATAAA	-16	NA	18695285	18690966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
Isoform_60864_82	chr16	-	1047	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	228	5	-25	-5	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATCTGTCGTTTATTT	NA	False	NA	-12	True	AATAAA	-10	NA	18695384	18690772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
Isoform_60876_220	chr16	-	3207	4	NNC	ENSMUSG00000041205.9	novel	3280	3	NA	NA	35	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.3793987620328	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGTATTCAATATTAAT	NA	False	NA	NA	False	AATAAA	-23	NA	20060073	20052058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_20053620_20053651_20054790_20055336_20055455_20059683
Isoform_60879_41	chr16	-	1379	10	FSM	ENSMUSG00000033918.17	ENSMUST00000136252.8	1362	10	-19	2	-3	-2	multi-exon	FALSE	canonical	3	76	junction_6	534.615126360388	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTCGTTCCTTCAG	NA	False	NA	-18	True	AATAAA	-22	NA	20121114	20098571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112047_20112153_20116342_20116484_20116880_20117077_20120958
Isoform_60882_1459	chr16	-	1320	10	FSM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	26	2	0	-2	multi-exon	FALSE	canonical	3	1528	junction_6	107.954723019524	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTCGTTCCTTCAG	NA	False	NA	-18	True	AATAAA	-22	NA	20121111	20098571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
Isoform_60884_22	chr16	-	1246	9	NIC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	575.510208423795	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTCGTTCCTTCAG	NA	False	NA	-18	True	AATAAA	-22	NA	20121086	20098571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20116342_20116484_20116880_20117077_20120958
Isoform_60886_3	chr16	-	2067	8	ISM	ENSMUSG00000022818.14	ENSMUST00000182741.2	1497	9	596	-622	-103	516	3prime_fragment	TRUE	canonical	2	4	junction_2	1.39970842444753	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATTAAGTGGAAATTAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	20134904	20127903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_20128732_20128831_20128974_20130978_20131167_20131777_20131920_20132477_20132652_20132947_20133109_20133704_20133855_20134622
Isoform_6089_4	chr10	+	2101	7	NIC	ENSMUSG00000038240.14	novel	2127	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	27.3536509852382	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	43097474	43316598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43315794
Isoform_60891_13	chr16	-	2482	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	63838	4	1450	-1	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTCTTGTTGTATAAA	NA	False	NA	-7	True	AATAAA	-16	NA	20181306	20150056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
Isoform_60894_27	chr16	-	2324	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	63998	2	1610	1	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20181146	20150054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
Isoform_6090_18	chr10	+	6194	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	153	-10	153	10	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGGTCTCTTTAACG	NA	False	NA	NA	False	TATAAA	-13	NA	43354979	43391402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
Isoform_60905_10	chr16	-	3634	15	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	51001	2	1249	1	3prime_fragment	TRUE	canonical	3	346	junction_14	55.0241598142607	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20194143	20150054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740
Isoform_60907_40	chr16	-	3446	16	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	1185	1	intron_retention	FALSE	canonical	2	15	junction_15	117.179330752294	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20194207	20150054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20194136
Isoform_60918_173	chr16	-	5765	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	43	3	2	0	multi-exon	FALSE	canonical	3	160	junction_25	98.9917903368873	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245101	20150055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
Isoform_60925_6	chr16	-	1993	6	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	1751	1	intron_retention	FALSE	canonical	3	23	junction_5	193.430090730476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20181005	20150054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20180931
Isoform_60927_4	chr16	-	3361	6	NIC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	4	-1	intron_retention	FALSE	canonical	2	5	junction_1	79.0554235963606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGGTATTTACTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	20245099	20219511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_20219822_20221009_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
Isoform_60928_34	chr16	-	4500	5	FSM	ENSMUSG00000022822.17	ENSMUST00000134962.2	4526	5	25	1	25	0	multi-exon	FALSE	canonical	3	182	junction_2	11.3578166916005	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	-9	True	AATAAA	-17	NA	20245049	20219510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
Isoform_60930_10	chr16	-	1467	2	FSM	ENSMUSG00000051146.4	ENSMUST00000052939.4	1291	2	-182	6	-182	-6	multi-exon	FALSE	canonical	3	19	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTCTGCTGC	NA	False	NA	-6	True	AATAAA	-19	NA	20440219	20437970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20438994_20439775
Isoform_60933_580	chr16	-	3168	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	-45	5	2	-5	multi-exon	FALSE	canonical	3	159	junction_10	37.9003269459341	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACTTGTGCTGTTGGCT	NA	False	NA	-4	True	AATAAA	-42	NA	20534912	20521718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_60935_13	chr16	-	3228	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	-105	5	-58	-5	multi-exon	FALSE	canonical	3	159	junction_10	37.9003269459341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACTTGTGCTGTTGGCT	NA	False	NA	-4	True	AATAAA	-42	NA	20534972	20521718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_60936_11	chr16	-	3377	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	-254	5	-207	-5	multi-exon	FALSE	canonical	3	159	junction_10	37.9003269459341	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACTTGTGCTGTTGGCT	NA	False	NA	-4	True	AATAAA	-42	NA	20535121	20521718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_60939_49	chr16	-	3051	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	2	-11	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	55.8162014750864	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAACACTTGTGCTG	NA	False	NA	-10	True	AATAAA	-36	NA	20534912	20521724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_60941_11	chr16	-	2958	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-1	-4	combination_of_known_splicesites	TRUE	canonical	3	13	junction_9	57.1271598864692	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534915	20521717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_60943_10	chr16	-	3456	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	2	-5	intron_retention	FALSE	canonical	3	33	junction_16	54.027177886812	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACTTGTGCTGTTGGCT	NA	False	NA	-4	True	AATAAA	-42	NA	20534912	20521718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_60945_17	chr16	-	3496	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	2	-11	intron_retention	FALSE	canonical	3	159	junction_9	36.3188360391639	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAACACTTGTGCTG	NA	False	NA	-10	True	AATAAA	-36	NA	20534912	20521724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_60947_11	chr16	-	3930	21	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	23	-9	intron_retention	FALSE	canonical	3	164	junction_14	30.921634820947	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGAACACTTGTGCTGTT	NA	False	NA	-8	True	AATAAA	-38	NA	20534891	20521722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_6095_4	chr10	+	3106	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	110	3121	110	2184	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATTTATGACTTT	NA	False	NA	NA	False	AAGAAA	-17	NA	43354936	43388271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
Isoform_60953_10	chr16	-	3569	22	FSM	ENSMUSG00000022843.18	ENSMUST00000153075.8	3511	22	-28	-30	-28	-4	multi-exon	FALSE	canonical	3	159	junction_8	38.9931676089723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534942	20521717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_60956_32	chr16	-	3133	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-25	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	59.9737718155622	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACACTTGTGCTGTTGG	NA	False	NA	-6	True	AATAAA	-40	NA	20534939	20521720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_6096_20	chr10	+	1917	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	-103	2	-103	-2	multi-exon	FALSE	canonical	3	74	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAGTCTGTTGAATTT	NA	False	NA	8	True	AATAAA	-17	NA	43455061	43460259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_43455319_43458599
Isoform_60962_8	chr16	-	1525	6	FSM	ENSMUSG00000022847.16	ENSMUST00000076422.13	1558	6	26	7	-21	-7	multi-exon	FALSE	canonical	3	14	junction_1	5.38887743412299	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATATGTGCTTTCAT	NA	False	NA	-5	True	TATAAA	-16	NA	20549322	20543914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252
Isoform_60964_77	chr16	-	5187	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	-24	1	-24	-1	multi-exon	FALSE	canonical	3	80	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACTGCCGTTGGGGTT	NA	False	NA	NA	False	AATAAA	-23	NA	21513439	21467795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21472509_21512965
Isoform_6097_24	chr10	+	1869	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	-53	0	-53	0	multi-exon	FALSE	canonical	3	74	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTCTGTTGAATTTAT	NA	False	NA	10	True	AATAAA	-19	NA	43455111	43460261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_43455319_43458599
Isoform_60971_4	chr16	-	1171	2	FSM	ENSMUSG00000043391.11	ENSMUST00000231592.2	1135	2	30	-66	-19	66	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGCCGCCCTGTAGT	NA	False	NA	69	True	NA	NA	NA	21513349	21495405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21496193_21512965
Isoform_60974_8	chr16	-	1715	2	NIC	ENSMUSG00000043391.11	novel	1695	3	NA	NA	13	41	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACCCTTCAGCCTTCTG	NA	False	NA	44	True	NA	NA	NA	21513366	21495430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_21496745_21512965
Isoform_60975_28	chr16	-	2976	7	FSM	ENSMUSG00000022853.8	ENSMUST00000023559.7	2981	7	5	0	5	0	multi-exon	FALSE	canonical	3	14	junction_3	3.35410196624968	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTGTGTAAAAAACTG	NA	False	NA	NA	False	AATAAA	-19	NA	21606552	21580036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21582087_21584975_21585318_21589165_21589271_21592244_21592357_21594094_21594262_21596548_21596653_21606456
Isoform_60976_202	chr16	-	1355	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	3	2	3	-1	multi-exon	FALSE	canonical	3	143	junction_1	14.1244468918255	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTTGCAGGTTCTGAAT	9193	False	NA	-4	True	ATTAAA	-14	NA	21766299	21753077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
Isoform_60978_16	chr16	-	1205	4	FSM	ENSMUSG00000022856.10	ENSMUST00000232635.2	1184	4	-20	-1	1	0	multi-exon	FALSE	canonical	2	6	junction_3	70.6304938866115	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	9191	False	NA	-2	True	ATTAAA	-16	NA	21766301	21753075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21766117
Isoform_60979_11	chr16	-	1923	9	ISM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	11336	1716	-7574	51	3prime_fragment	FALSE	canonical	3	141	junction_8	24.9821811497715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCCTCCTGGACTGTTT	NA	False	NA	NA	False	NA	NA	NA	21803077	21774282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650
Isoform_6098_72	chr10	+	1814	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	2	0	2	0	multi-exon	FALSE	canonical	3	74	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTCTGTTGAATTTAT	NA	False	NA	10	True	AATAAA	-19	NA	43455166	43460261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_43455319_43458599
Isoform_60984_7	chr16	-	2002	9	ISM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	11257	1716	-7653	51	3prime_fragment	FALSE	canonical	3	141	junction_8	24.9821811497715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCCTCCTGGACTGTTT	NA	False	NA	NA	False	NA	NA	NA	21803156	21774282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650
Isoform_60985_6	chr16	-	2549	9	ISM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	11335	1091	-7575	479	3prime_fragment	FALSE	canonical	3	141	junction_8	24.9821811497715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTGTTAGAGGAATTAA	NA	False	NA	-24	True	AATACA	-16	NA	21803078	21773657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650
Isoform_60989_153	chr16	-	2051	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	156	1716	6	51	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCCTCCTGGACTGTTT	NA	False	NA	NA	False	NA	NA	NA	21814257	21774282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_60991_130	chr16	-	2655	11	NNC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	7	479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.2891787338586	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTGTTAGAGGAATTAA	NA	False	NA	-24	True	AATACA	-16	NA	21814256	21773657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_21774117_21774136_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_60993_8	chr16	-	2736	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	96	1091	-54	479	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTGTTAGAGGAATTAA	NA	False	NA	-24	True	AATACA	-16	NA	21814317	21773657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_60997_20	chr16	-	3757	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	157	9	7	-9	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGGTAATTCTCC	NA	False	NA	NA	False	NA	NA	NA	21814256	21772575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_60998_14	chr16	-	2116	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	91	1716	-59	51	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCCTCCTGGACTGTTT	NA	False	NA	NA	False	NA	NA	NA	21814322	21774282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_610_1032	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	1	-1	1	1	multi-exon	FALSE	canonical	3	1234	junction_3	576.603416569829	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1945	8940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
Isoform_6101_424	chr10	+	2978	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	4	-1	4	1	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTTTTTGGTCACTGT	NA	False	NA	9	True	NA	NA	NA	43777806	43823859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
Isoform_61029_734	chr16	-	3637	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	260	2	-20	-2	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGGTGTCTTGGTGTC	2533	False	NA	NA	False	AATATA	-14	NA	21981789	21877760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
Isoform_61041_68	chr16	-	3662	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	237	0	-43	0	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2510	False	NA	NA	False	AATATA	-16	NA	21981812	21877758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
Isoform_61055_230	chr16	-	2005	9	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	583	at_least_one_novel_splicesite	FALSE	canonical	3	309	junction_2	620.677741968407	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTGTTGGTTTTCTTT	NA	False	NA	-22	True	AATAAA	-36	NA	22084676	22064614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_22065617_22065939_22066011_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
Isoform_61056_70	chr16	-	2113	9	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	691	at_least_one_novel_splicesite	TRUE	canonical	3	309	junction_2	620.677741968407	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGGCCAAGTAGAA	NA	False	NA	-17	True	ATTAAA	-12	NA	22084676	22064506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_22065617_22065939_22066011_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
Isoform_61073_88	chr16	-	2403	10	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	2	583	combination_of_known_junctions	FALSE	canonical	3	119	junction_8	731.055553444622	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTGTTGGTTTTCTTT	NA	False	NA	-22	True	AATAAA	-36	NA	22084674	22064614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077614_22078012_22084490
Isoform_6108_5	chr10	+	2794	7	NIC	ENSMUSG00000019864.15	novel	2981	9	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	58.7983843315443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTGGTCACTGTT	NA	False	NA	10	True	NA	NA	NA	43777805	43823860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43808358_43808543_43811994_43812088_43822416
Isoform_61081_100	chr16	-	2390	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	2	-705	2	691	multi-exon	TRUE	canonical	3	442	junction_8	660.884723143114	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGGCCAAGTAGAA	NA	False	NA	-17	True	ATTAAA	-12	NA	22084674	22064506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
Isoform_61082_243	chr16	-	2282	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	2	-597	2	583	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTGTTGGTTTTCTTT	NA	False	NA	-22	True	AATAAA	-36	NA	22084674	22064614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
Isoform_61094_767	chr16	-	2114	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	81	1208	2	691	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGGCCAAGTAGAA	NA	False	NA	-17	True	ATTAAA	-12	NA	22084674	22064506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
Isoform_61095_1788	chr16	-	2008	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	79	1316	0	583	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTGTTGGTTTTCTTT	NA	False	NA	-22	True	AATAAA	-36	NA	22084676	22064614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
Isoform_6110_280	chr10	+	2242	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	111	-1	54	1	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTGGTGGCTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	44144464	44240288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
Isoform_6113_43	chr10	+	1695	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	4	653	4	-653	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATACAGTTTGTCACT	NA	False	NA	14	True	AATAAA	-26	NA	44144357	44239634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
Isoform_61130_1376	chr16	-	3189	7	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	24737	-7	-9948	0	3prime_fragment	TRUE	canonical	3	940	junction_4	61.8456860976486	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	NA	False	NA	-13	True	AATAAA	-22	NA	22230527	22200058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
Isoform_61153_411	chr16	-	3866	13	FSM	ENSMUSG00000013089.16	ENSMUST00000079601.13	3975	13	105	4	2	3	multi-exon	FALSE	canonical	3	174	junction_9	424.638105724549	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATTCCTGCAACCTGCCT	7591	False	NA	-17	True	AATAAA	-18	NA	22258364	22200062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
Isoform_61157_37	chr16	-	3264	8	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	32.3772406836301	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTACTGTGCCAGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	22676295	22631968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
Isoform_61158_40	chr16	-	2669	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	129	5	0	1	multi-exon	FALSE	canonical	3	51	junction_7	24.7526539496479	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTACTGTGCCAGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	22676290	22631968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
Isoform_61159_42	chr16	-	2609	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	129	65	0	-59	multi-exon	FALSE	canonical	3	51	junction_7	24.7526539496479	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAACTTTTTCTCCTT	NA	False	NA	NA	False	AATAAA	-6	NA	22676290	22632028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
Isoform_6116_10	chr10	+	2248	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_5	103.891636921468	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTGGTGGCTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	44144363	44240288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44222952_44223071_44238911
Isoform_61161_23	chr16	-	2521	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	125	-1	0	1	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTACTGTGCCAGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	22676292	22631968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_61163_38	chr16	-	2463	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	123	59	0	-59	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAACTTTTTCTCCTT	NA	False	NA	NA	False	AATAAA	-6	NA	22676294	22632028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_61164_7	chr16	-	2674	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	-28	-1	-26	1	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTACTGTGCCAGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	22676445	22631968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_61165_9	chr16	-	2604	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	-18	59	-16	-59	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAACTTTTTCTCCTT	NA	False	NA	NA	False	AATAAA	-6	NA	22676435	22632028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_61167_5	chr16	-	2326	7	NNC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	32	-433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.6037765074465	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATAGAGCATTATTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	22663361	22636595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22663305
Isoform_61168_28	chr16	-	3063	7	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	0	-430	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	32.7193452800565	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAGAGCATTATTAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	22676294	22636592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
Isoform_61169_6	chr16	-	3232	7	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	-1	-262	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	32.7193452800565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATGAGTCTGAGTG	NA	False	NA	NA	False	AAGAAA	-7	NA	22676295	22636424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
Isoform_61170_45	chr16	-	2471	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	127	4629	0	-430	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAGAGCATTATTAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	22676292	22636592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
Isoform_61171_15	chr16	-	2644	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	122	4461	-3	-262	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATGAGTCTGAGTG	NA	False	NA	NA	False	AAGAAA	-7	NA	22676297	22636424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
Isoform_61172_15	chr16	-	2528	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	124	4575	-1	-376	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACACTAGATGAAAGTC	NA	False	NA	NA	False	AATAAA	-35	NA	22676295	22636538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
Isoform_61173_32	chr16	-	2323	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	121	4625	-2	-432	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATAGAGCATTATTAATA	NA	False	NA	NA	False	AATAAA	-19	NA	22676296	22636594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_61174_11	chr16	-	2474	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	-28	4623	-26	-430	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAGAGCATTATTAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	22676445	22636592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_61176_6	chr16	-	2493	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	121	4455	-2	-262	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATGAGTCTGAGTG	NA	False	NA	NA	False	AAGAAA	-7	NA	22676296	22636424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_61177_8	chr16	-	1928	4	FSM	ENSMUSG00000004462.8	ENSMUST00000232251.2	790	4	-665	-473	10	-21	multi-exon	FALSE	canonical	3	22	junction_3	44.1688678696759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGGAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	22676280	22644265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22644883_22652627_22652784_22660478_22660858_22675504
Isoform_61179_6	chr16	-	1223	4	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	97	12301	-26	-26	5prime_fragment	FALSE	canonical	3	49	junction_3	31.4783876475414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGTAAAAATAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	22676320	22644270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_6118_7	chr10	+	2185	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	32	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	114.808536267997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTGGTGGCTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	44144442	44240288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44179562_44179726_44195455_44195551_44222952_44223071_44238911
Isoform_61181_24	chr16	-	1273	12	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	2	35	junction_8	593.762439626105	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTGAATATACAATTTT	NA	False	NA	-31	True	AATAAA	-18	NA	22946466	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22940979_22941051_22943285_22943365_22946149_22946292_22946434
Isoform_61186_700	chr16	-	1225	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	-2	5	-2	3	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTGAATATACAATTTT	NA	False	NA	-31	True	AATAAA	-18	NA	22946489	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
Isoform_61187_797	chr16	-	1203	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	21	4	1	-4	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGAATATACAATTTTA	NA	False	NA	-30	True	AATAAA	-19	NA	22946466	22932696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
Isoform_6119_5	chr10	+	2263	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	114.808536267997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTGGTGGCTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	44144364	44240288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44179562_44179726_44195455_44195551_44222952_44223071_44238911
Isoform_61197_5	chr16	-	3298	10	FSM	ENSMUSG00000022508.6	ENSMUST00000023151.6	3525	10	221	6	221	-6	multi-exon	FALSE	canonical	0	0	junction_5	2.06080411011016	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGAGCTGGCTCTTTC	NA	False	NA	-7	True	AATAAA	-8	NA	23807381	23783807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_23785019_23786809_23786948_23787056_23787188_23788655_23788824_23790164_23790350_23790994_23791970_23793562_23793785_23796264_23796437_23797300_23797340_23807324
Isoform_61198_182	chr16	-	3099	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	-45	1	-45	-1	multi-exon	FALSE	canonical	3	119	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTTGTCATTATTACT	4752	False	NA	-1	True	AATAAA	-23	NA	28748470	28644928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_28647762_28748204
Isoform_612_980	SIRV3	+	1806	2	FSM	SIRV3A	SIRV302	1807	2	1	0	1	0	multi-exon	FALSE	canonical	3	834	junction_1	0	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1964	7822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_+_2006_6057
Isoform_61201_21	chr16	-	3569	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	-516	2	-516	-2	multi-exon	FALSE	canonical	3	119	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTGTCATTATTAC	4281	False	NA	-2	True	AATAAA	-22	NA	28748941	28644929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_28647762_28748204
Isoform_61203_22	chr16	-	3543	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	-489	1	-489	-1	multi-exon	FALSE	canonical	3	119	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTTGTCATTATTACT	4308	False	NA	-1	True	AATAAA	-23	NA	28748914	28644928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_28647762_28748204
Isoform_61206_6	chr16	-	3884	3	NNC	ENSMUSG00000051065.10	novel	3055	2	NA	NA	-920	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTGTCATTATTAC	3877	False	NA	-2	True	AATAAA	-22	NA	28749345	28644929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_28647762_28748204_28749147_28749235
Isoform_6121_5	chr10	+	2253	9	NNC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	95	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	122.27198166383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTATGTGGTGGCTC	NA	False	NA	NA	False	AATAAA	-17	NA	44144505	44240286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_44144581_44150636_44150691_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
Isoform_61211_14	chr16	-	5311	2	FSM	ENSMUSG00000052316.10	ENSMUST00000064606.8	5310	2	-2	1	-2	-1	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGTGTGTTCTCTGTGGA	NA	False	NA	-2	True	AATAAA	-14	NA	30102076	30088120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30093341_30101985
Isoform_61215_54	chr16	-	7614	34	FSM	ENSMUSG00000022533.15	ENSMUST00000100013.9	7310	34	-307	3	0	-3	multi-exon	FALSE	canonical	3	161	junction_1	36.4499984569475	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	30207655	30131243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30162707_30162726_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
Isoform_61221_4	chr16	-	7529	33	NIC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_27	57.6385474178305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207648	30131240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30162707_30162726_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
Isoform_61228_102	chr16	-	7517	33	FSM	ENSMUSG00000022533.15	ENSMUST00000061350.13	7220	33	-300	3	7	-3	multi-exon	TRUE	canonical	3	211	junction_18	25.9578986052415	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	30207648	30131243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30162707_30162726_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
Isoform_61233_7	chr16	-	2761	17	ISM	ENSMUSG00000022533.15	ENSMUST00000061350.13	7220	33	-321	31753	-14	9993	5prime_fragment	FALSE	canonical	3	211	junction_2	23.0867081618407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACCATTTACTGTGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	30207669	30162993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
Isoform_61234_21	chr16	-	2152	11	NIC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.46260011349907	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTCTCACGGTGGAGA	NA	False	NA	NA	False	AATAAA	-19	NA	30369388	30332786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
Isoform_61235_5	chr16	-	2430	11	NIC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.46260011349907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCTCTCGGCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	30369388	30332508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
Isoform_61238_19	chr16	-	2119	10	FSM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	8	278	0	1	multi-exon	FALSE	canonical	3	16	junction_1	4.30618275001691	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTCTCACGGTGGAGA	NA	False	NA	NA	False	AATAAA	-19	NA	30369388	30332786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
Isoform_61239_5	chr16	-	4225	10	FSM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	15	-1835	7	-1	multi-exon	FALSE	canonical	3	16	junction_1	4.30618275001691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGGTTTATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	30369381	30330673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
Isoform_6124_755	chr10	+	2855	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-122	8200	-122	-8200	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTAGTTTTGGTTCCTT	NA	False	NA	34	True	AATAAA	-19	NA	44943176	45035094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
Isoform_61246_619	chr16	-	2265	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	40	875	11	2	multi-exon	FALSE	canonical	2	298	junction_4	64.525303508774	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30406370	30380186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
Isoform_61247_294	chr16	-	2301	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	4	875	1	2	multi-exon	FALSE	canonical	2	298	junction_4	64.525303508774	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30406406	30380186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
Isoform_6125_2155	chr10	+	2719	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	14	8200	14	-8200	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	2155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTAGTTTTGGTTCCTT	NA	False	NA	34	True	AATAAA	-19	NA	44943312	45035094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
Isoform_61252_18	chr16	-	2284	14	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	141.24916086047	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30406371	30380186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400979_30401348_30401470_30404371_30404499_30406255
Isoform_61259_423	chr16	-	3449	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	15	6	15	-6	multi-exon	FALSE	canonical	3	135	junction_2	21.3124898175277	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGCTACAGTGTCTTC	NA	False	NA	-11	True	ATTAAA	-6	NA	30900235	30773967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
Isoform_61272_4	chr16	-	6548	24	FSM	ENSMUSG00000049076.13	ENSMUST00000231125.2	2334	24	-283	-3931	-29	0	multi-exon	FALSE	canonical	3	15	junction_14	39.6330522162666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGCTGTAAGTGCTCC	NA	False	NA	-23	True	AATAAA	-18	NA	31020092	30911232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30941438_30941460_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
Isoform_61273_17	chr16	-	6494	24	FSM	ENSMUSG00000049076.13	ENSMUST00000231125.2	2334	24	-227	-3933	27	-1	multi-exon	FALSE	canonical	3	15	junction_14	39.6330522162666	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTGTAAGTGCTCCAG	NA	False	NA	-21	True	AATAAA	-20	NA	31020036	30911230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30941438_30941460_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
Isoform_61276_60	chr16	-	6504	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-88	-3002	-5	1	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGCTGTAAGTGCTCCA	NA	False	NA	-22	True	AATAAA	-19	NA	31020068	30911231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
Isoform_61278_126	chr16	-	6467	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-49	-3004	34	0	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTAAGTGCTCCAGC	NA	False	NA	-20	True	AATAAA	-21	NA	31020029	30911229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
Isoform_61279_7	chr16	-	6584	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-163	-3007	-80	3	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAAGTGCTCCAGCTCC	NA	False	NA	-17	True	AATAAA	-24	NA	31020143	30911226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
Isoform_61285_393	chr16	-	2363	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	22	1693	22	-1693	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGTTAGAAGAATGTG	NA	False	NA	-14	True	AATAAA	-16	NA	31094073	31072047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
Isoform_61289_46	chr16	-	992	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	-9	3095	-9	-3095	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTTTCTTGTTCTCTA	NA	False	NA	-4	True	AATACA	-18	NA	31094104	31073449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
Isoform_61298_44	chr16	-	4043	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	22	13	22	-13	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGTCTAAATTTTGTT	NA	False	NA	-10	True	ATTAAA	-15	NA	31094073	31070367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
Isoform_61300_162	chr16	-	1180	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	-294	72	-9	-72	multi-exon	FALSE	canonical	3	993	junction_1	34.2746261832277	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTTGCTTTTG	NA	False	NA	1	True	ATTAAA	-22	NA	31094104	31076864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
Isoform_61309_30	chr16	-	978	5	FSM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	38	-37	38	3	multi-exon	FALSE	canonical	3	104	junction_4	27.2614654778499	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8748	False	NA	-1	True	AATAAA	-15	NA	31133374	31115936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216
Isoform_6131_76	chr10	+	2801	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	14	8118	14	-8118	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGTTTCCAACAATGAG	NA	False	NA	10	True	AATAAA	-22	NA	44943312	45035176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
Isoform_61310_25	chr16	-	935	6	FSM	ENSMUSG00000022548.15	ENSMUST00000130560.8	2074	6	212	927	-2	3	multi-exon	FALSE	canonical	3	43	junction_5	47.7887015935775	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8708	False	NA	-1	True	AATAAA	-15	NA	31133414	31115936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216_31133287_31133369
Isoform_61311_6	chr16	-	865	5	FSM	ENSMUSG00000022548.15	ENSMUST00000115230.2	1070	5	208	-3	-2	3	multi-exon	FALSE	canonical	2	5	junction_4	68.1725751310598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8708	False	NA	-1	True	AATAAA	-15	NA	31133414	31115936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133369
Isoform_61314_66	chr16	-	6198	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	131	3	7	-3	multi-exon	FALSE	canonical	3	47	junction_4	8.64670064815276	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTGTTCTGTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	31821974	31778492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
Isoform_61316_9	chr16	-	4680	9	NIC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	20.0234237831596	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTGTTCTGTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	31821982	31778492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31821809
Isoform_61318_5	chr16	-	2185	7	NIC	ENSMUSG00000022772.13	novel	2804	6	NA	NA	3	-104	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	18.8826787176914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGATAAGCCTTATGG	NA	False	NA	NA	False	AATAAA	-29	NA	31821993	31794743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_31794848_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
Isoform_61320_24	chr16	-	3860	2	ISM	ENSMUSG00000022772.13	ENSMUST00000144320.2	2804	6	-38	9871	-38	-9871	5prime_fragment	FALSE	canonical	3	70	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTGTGCAAGTCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	31822034	31805648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_31809284_31821809
Isoform_61330_357	chr16	-	4156	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	5	1580	5	-1580	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAATTGTATGAATTGA	NA	False	NA	-5	True	ATTAAA	-19	NA	31898155	31836687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
Isoform_61332_117	chr16	-	5731	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	5	5	5	-5	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTAAATTTCCATTT	NA	False	NA	-15	True	AATAAA	-17	NA	31898155	31835112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
Isoform_61345_6	chr16	-	1148	7	NNC	ENSMUSG00000023791.19	novel	993	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	180.633760840978	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACTGGTTAGTTTGTCT	NA	False	NA	-5	True	AATAAA	-25	NA	31918556	31903238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31914370_31914523_31915817_31915882_31918287
Isoform_61346_12	chr16	-	1169	7	NIC	ENSMUSG00000023791.19	novel	993	6	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_5	171.687377391454	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTAGTTTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-29	NA	31918569	31903234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31914370_31914527_31915817_31915882_31918287
Isoform_61347_158	chr16	-	984	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	15	-6	4	0	multi-exon	FALSE	canonical	3	398	junction_3	17.8258239641258	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	-2	True	AATAAA	-28	NA	31918541	31903235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
Isoform_61349_36	chr16	-	986	6	FSM	ENSMUSG00000023791.19	ENSMUST00000189013.8	982	6	-3	-1	-2	-1	multi-exon	FALSE	canonical	3	94	junction_5	129.408500493592	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTAGTTTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-29	NA	31918548	31903234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
Isoform_61350_3	chr16	-	838	6	FSM	ENSMUSG00000023791.19	ENSMUST00000232321.2	818	6	-21	1	-21	-1	multi-exon	FALSE	canonical	3	63	junction_5	141.720287891325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTAGTTTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-29	NA	31918579	31903234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918472
Isoform_61351_9	chr16	-	900	5	NIC	ENSMUSG00000023791.19	novel	993	6	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	167.537309277665	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTAGTTTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-29	NA	31918520	31903234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31918287
Isoform_61352_5	chr16	-	915	5	NIC	ENSMUSG00000023791.19	novel	982	6	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	179.165251932399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTAGTTTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-29	NA	31918541	31903234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31918293
Isoform_61353_6	chr16	-	762	5	FSM	ENSMUSG00000023791.19	ENSMUST00000147688.8	713	5	-7	-42	-3	-1	multi-exon	FALSE	canonical	3	25	junction_2	176.233332545237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTAGTTTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-29	NA	31918532	31903234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31903445_31904054_31904156_31911161_31911304_31915817_31915882_31918287
Isoform_61355_15	chr16	-	2477	3	FSM	ENSMUSG00000052384.15	ENSMUST00000099991.11	2548	3	62	9	-29	1	multi-exon	FALSE	canonical	2	4	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAAATGCATCTTGTG	NA	False	NA	NA	False	AATAAA	-24	NA	31984341	31961611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31963824_31966370_31966492_31984197
Isoform_61357_7	chr16	-	2525	3	FSM	ENSMUSG00000052384.15	ENSMUST00000099991.11	2548	3	14	9	14	1	multi-exon	FALSE	canonical	2	4	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAAATGCATCTTGTG	NA	False	NA	NA	False	AATAAA	-24	NA	31984389	31961611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31963824_31966370_31966492_31984197
Isoform_61359_123	chr16	-	4191	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	-14	2	-14	-2	multi-exon	FALSE	canonical	3	188	junction_2	4	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTGGTAGTCCATGT	7809	False	NA	0	True	ATTAAA	-15	NA	32065990	32048931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_32052087_32057217_32057575_32065311
Isoform_61376_33	chr16	-	1421	9	FSM	ENSMUSG00000035699.9	ENSMUST00000042042.9	2618	9	165	1032	-11	-13	multi-exon	FALSE	canonical	3	30	junction_3	5.50993421013355	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGCTTGCACAAGACACAC	NA	False	NA	-21	True	AATAAA	-14	NA	32306532	32294353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_32294697_32295190_32295297_32295984_32296132_32296365_32296478_32297122_32297282_32297533_32297608_32298467_32298623_32304952_32305048_32306302
Isoform_61378_3	chr16	-	1438	9	FSM	ENSMUSG00000035699.9	ENSMUST00000042042.9	2618	9	106	1074	-70	-55	multi-exon	FALSE	canonical	3	30	junction_3	5.50993421013355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGTCTTTCTCATTTT	NA	False	NA	-63	True	NA	NA	NA	32306591	32294395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_32294697_32295190_32295297_32295984_32296132_32296365_32296478_32297122_32297282_32297533_32297608_32298467_32298623_32304952_32305048_32306302
Isoform_61380_124	chr16	-	5279	19	FSM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	0	-22	0	1	multi-exon	FALSE	canonical	3	55	junction_16	7.31732258934531	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACGACTGTGGAATGGTT	NA	False	NA	-13	True	AATAAA	-37	NA	32688721	32642075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
Isoform_61383_5	chr16	-	5419	19	FSM	ENSMUSG00000035629.20	ENSMUST00000119810.2	3371	19	102	-2150	102	-2	multi-exon	FALSE	canonical	2	4	junction_18	16.139151843335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGACGACTGTGGAATG	NA	False	NA	-16	True	AATAAA	-34	NA	32698034	32642078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32697632
Isoform_61384_3	chr16	-	2269	10	ISM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	10	13794	-2	3	5prime_fragment	FALSE	canonical	3	55	junction_7	8.88194172964949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	ATTAAA	-30	NA	32688711	32655891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
Isoform_61385_5	chr16	-	759	4	FSM	ENSMUSG00000035578.17	ENSMUST00000133219.2	442	4	5	-322	5	-8	multi-exon	FALSE	canonical	1	1	junction_3	27.6043474836845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATTCTCACCTAGC	NA	False	NA	-6	True	ATTAAA	-21	NA	32844302	32836997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_32837434_32839810_32839913_32840883_32841016_32844213
Isoform_61386_25	chr16	-	1267	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6392	-8	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATTCTCACCTAGC	6112	False	NA	-6	True	ATTAAA	-21	NA	32863848	32836997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
Isoform_61389_4	chr16	-	2483	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6390	1206	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTGCAATGAAAAAGGCT	6110	False	NA	NA	False	AATAAA	-18	NA	32863850	32835783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
Isoform_61390_4	chr16	-	3362	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6385	-1857	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGAGGTTTAATGCTGC	6105	False	NA	NA	False	ATTAAA	-18	NA	32863855	32834909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
Isoform_61392_7	chr16	-	1688	11	FSM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	-18	3948	10	-11	multi-exon	TRUE	canonical	2	4	junction_9	25.6242073048124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGTGAATTCTCACCT	1154	False	NA	-9	True	ATTAAA	-18	NA	32876578	32837000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873993_32874065_32876520
Isoform_61393_15	chr16	-	717	2	FSM	ENSMUSG00000097318.3	ENSMUST00000231849.2	665	2	-52	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGAATTCTCTCCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	33201097	33200223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33200729_33200885
Isoform_61394_27	chr16	-	738	2	FSM	ENSMUSG00000097318.3	ENSMUST00000180923.2	737	2	0	-1	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGAATTCTCTCCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	33201097	33200223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33200750_33200885
Isoform_61402_388	chr16	-	3445	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	37	2	2	-2	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTAGTCTCCTGCCT	8677	False	NA	NA	False	NA	NA	NA	33787371	33775153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
Isoform_61403_50	chr16	-	3481	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	1	2	1	-2	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTAGTCTCCTGCCT	8641	False	NA	NA	False	NA	NA	NA	33787407	33775153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
Isoform_61408_1372	chr16	-	1632	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	37	1815	2	-1803	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGACTGGTATTTGTT	8677	False	NA	NA	False	NA	NA	NA	33787371	33776966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
Isoform_61409_224	chr16	-	1668	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	1	1815	1	-1803	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGACTGGTATTTGTT	8641	False	NA	NA	False	NA	NA	NA	33787407	33776966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
Isoform_61417_34	chr16	-	3289	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	2	-8	2	-4	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTCTGTAGTCTCCTGC	8677	False	NA	NA	False	NA	NA	NA	33787371	33775155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
Isoform_61418_50	chr16	-	1479	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	2	1802	2	-1802	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGACTGGTATTTGTTT	8677	False	NA	NA	False	NA	NA	NA	33787371	33776965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
Isoform_61426_3	chr16	-	3048	19	NNC	ENSMUSG00000061751.17	novel	7636	49	NA	NA	-12544	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	9.85340074151252	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGTCAAAGGTTAGTTG	NA	False	NA	1	True	AATAAA	-23	NA	33996193	33833504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_33834047_33834327_33834585_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
Isoform_61427_14	chr16	-	2684	16	NNC	ENSMUSG00000061751.17	novel	2690	16	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	6.90700127889569	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCAAAGGTTAGTT	NA	False	NA	0	True	AATAAA	-22	NA	33916385	33833505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33916165
Isoform_61428_9	chr16	-	3074	19	NNC	ENSMUSG00000061751.17	novel	7636	49	NA	NA	-12568	2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_16	9.12752586383965	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGTCAAAGGTTAGTTG	NA	False	NA	1	True	AATAAA	-23	NA	33996217	33833504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
Isoform_61430_5	chr16	-	3072	19	NIC	ENSMUSG00000061751.17	novel	7636	49	NA	NA	-12570	4	combination_of_known_junctions	FALSE	canonical	1	7	junction_16	9.06236962443469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTAATGAGGTCAAAGG	NA	False	NA	-6	True	AATAAA	-16	NA	33996219	33833511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
Isoform_61431_4	chr16	-	2721	16	NNC	ENSMUSG00000061751.17	novel	2693	16	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	6.64195419703837	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGTCAAAGGTTAGTTG	NA	False	NA	1	True	AATAAA	-23	NA	33916418	33833504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_-_33834052_33834327_33834585_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33916165
Isoform_61432_6	chr16	-	2710	16	FSM	ENSMUSG00000061751.17	ENSMUST00000114964.8	2693	16	-7	-10	-7	1	multi-exon	FALSE	canonical	3	14	junction_2	6.46701030014815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCAAAGGTTAGTT	NA	False	NA	0	True	AATAAA	-22	NA	33916405	33833505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33834052_33834327_33834585_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33916165
Isoform_61438_365	chr16	+	3114	7	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	149.069335098358	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTACAGTCTGAGTT	NA	False	NA	18	True	AATAAA	-27	NA	17577535	17611245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_61443_150	chr16	+	983	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17038	6	at_least_one_novel_splicesite	FALSE	canonical	3	485	junction_1	244.404064898224	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACATTTCCTTTTGATT	733	False	NA	17	True	AATAAA	-22	NA	48432067	48451269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_61444_30	chr16	+	1028	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16995	8	at_least_one_novel_splicesite	FALSE	canonical	3	485	junction_1	244.404064898224	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	690	False	NA	19	True	AATAAA	-24	NA	48432024	48451271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_61446_5	chr16	+	2493	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-574	1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2290	False	NA	17	True	NA	NA	NA	93811725	93815011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93811971_93812713_93814317_93814366
Isoform_61447_37	chr16	+	2499	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-502	1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.802777744748	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2362	False	NA	17	True	NA	NA	NA	93811797	93815011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93811971_93812291_93812370_93812713_93814317_93814366
Isoform_61448_16	chr16	+	2650	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-653	1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.802777744748	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2211	False	NA	17	True	NA	NA	NA	93811646	93815011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93811971_93812291_93812370_93812713_93814317_93814366
Isoform_61453_32	chr16	+	953	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-473	1916	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	36.1693547388148	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2391	False	NA	17	True	NA	NA	NA	93811826	93815011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572
Isoform_61454_9	chr16	+	1097	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-618	1915	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	36.1693547388148	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2246	False	NA	16	True	NA	NA	NA	93811681	93815010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572
Isoform_61456_63	chr16	+	874	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17038	7	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	345.998525418587	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	733	False	NA	18	True	AATAAA	-23	NA	48432067	48451270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_61457_17	chr16	+	918	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16995	8	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	345.998525418587	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	690	False	NA	19	True	AATAAA	-24	NA	48432024	48451271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_61460_14	chr16	+	2807	19	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	18060	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	404.178041077059	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACATTTCCTTTTGATT	7581	False	NA	17	True	AATAAA	-22	NA	48318054	48451269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_61466_22	chr16	+	2001	9	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	9	38	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	251.54817505798	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383182	38411746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_38383410_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_61471_24	chr16	+	6295	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	19470	0	intron_retention	FALSE	canonical	3	13	junction_1	33.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTCTGTGACTATAC	654	False	NA	17	True	ATTAAA	-19	NA	17070997	17081294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_17071098_17072831_17072931_17075198
Isoform_61476_7	chr16	+	1697	3	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	53039	939	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	3.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTAGTCTTCACTTCTCC	6148	False	NA	16	True	AATAAA	-26	NA	8951047	8956247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_8951217_8953545_8953645_8954818
Isoform_61477_10	chr16	+	919	5	NNC	ENSMUSG00000116641.2	novel	1200	5	NA	NA	22165	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	5.44862367942584	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAACCATTATTTGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	94544917	94554299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_94545201_94549749_94549952_94553485_94553564_94553805_94553999_94554136
Isoform_61481_7	chr16	+	438	2	Antisense	novelGene_ENSMUSG00000043301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTACTTCTGTCTGTCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	94656128	94656880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_94656240_94656553
Isoform_61483_6	chr16	+	5845	9	NNC	ENSMUSG00000036208.14	novel	3743	6	NA	NA	248	2502	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	17.4982141945971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTACAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	44544967	44560149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_44545613_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
Isoform_61484_8	chr16	+	4030	9	NNC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	46.8368177825949	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACGAATGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	33201476	33319014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_33201588_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
Isoform_61488_7	chr16	+	3374	28	NNC	ENSMUSG00000033653.19	novel	804	10	NA	NA	15813	1	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	33.1526378089284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	4851	False	NA	14	True	AATAAA	-20	NA	21304749	21463423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_21305165_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
Isoform_61490_6	chr16	+	855	2	Intergenic	novelGene_4380	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTAGATAAGGAATCTG	NA	False	NA	NA	False	NA	NA	NA	18854540	18859453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18854906_18858963
Isoform_61491_4	chr16	+	1425	3	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	11789	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	31.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAATTCTTGGTTTCTC	NA	False	NA	4	True	AATAAA	-7	NA	12962043	12966591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_12962154_12962264_12962378_12965389
Isoform_61497_6	chr16	+	3117	11	NNC	ENSMUSG00000022545.14	novel	5130	10	NA	NA	-375	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.148664792214	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGGTTTCTCAGTGTT	NA	False	NA	10	True	AATAAA	-13	NA	12927172	12966597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_12927269_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
Isoform_61498_5	chr16	+	2625	16	NNC	ENSMUSG00000057880.13	novel	696	10	NA	NA	-420	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.7273761995985	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTGTTGGTTCCTGAT	NA	False	NA	NA	False	TATAAA	-18	NA	8390345	8437437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_8390476_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
Isoform_61501_6	chr16	+	1061	2	Intergenic	novelGene_4355	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCTGTTTCTTGTGG	NA	False	NA	9	True	NA	NA	NA	17829606	17834851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17829831_17834014
Isoform_61503_3	chr16	+	1161	5	NNC	ENSMUSG00000116930.2	novel	1268	4	NA	NA	124431	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.6393596310755	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCATGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	91979634	91984230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_91979817_91979836_91979896_91981797_91981879_91983347_91983620_91983663
Isoform_61505_3	chr16	+	1718	11	NNC	ENSMUSG00000022946.11	novel	1573	10	NA	NA	-669	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.2309169342371	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	3880	False	NA	20	True	AATAAA	-23	NA	93595052	93607476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93595268_93595793_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
Isoform_61508_3	chr16	+	1878	3	Antisense	novelGene_ENSMUSG00000022500.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTGCCTTTGGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	10826345	10832856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_10826593_10829816_10829861_10831269
Isoform_61509_3	chr16	+	2969	10	NNC	ENSMUSG00000022545.14	novel	651	2	NA	NA	8434	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.1928981513579	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTTGGTTTCTCAGT	NA	False	NA	7	True	AATAAA	-10	NA	12938091	12966594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_12938224_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
Isoform_61513_244	chr16	+	3222	6	FSM	ENSMUSG00000022529.12	ENSMUST00000023176.5	3241	6	20	-1	20	1	multi-exon	FALSE	canonical	3	89	junction_1	57.158026557956	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGAATATGTATAAATC	NA	False	NA	4	True	AATAAA	-13	NA	3561976	3568646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
Isoform_61516_38	chr16	+	3971	6	FSM	ENSMUSG00000022529.12	ENSMUST00000161630.8	3856	6	-119	4	20	2	multi-exon	FALSE	canonical	2	13	junction_1	76.2532622252976	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATGTATAAATCTTTA	NA	False	NA	8	True	AATAAA	-17	NA	3561976	3568650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_3563377_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
Isoform_61520_3	chr16	+	2393	7	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.8141758178173	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702502	3722634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718741_3719646_3719990_3721329
Isoform_61521_4	chr16	+	556	3	FSM	ENSMUSG00000014232.15	ENSMUST00000137745.2	515	3	-41	0	-41	0	multi-exon	FALSE	canonical	3	128	junction_1	17.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCTCTTTCGGAGTC	3267	False	NA	NA	False	AATAAA	-14	NA	3726861	3731436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_3727018_3729314_3729427_3731148
Isoform_61524_87	chr16	+	1592	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	185	2	-29	-2	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTGGCTGCTATTATT	3279	False	NA	5	True	AATACA	-15	NA	3726873	3759009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
Isoform_61525_75	chr16	+	1620	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	158	1	-56	-1	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGGCTGCTATTATTA	3252	False	NA	6	True	AATACA	-16	NA	3726846	3759010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
Isoform_61526_93	chr16	+	3616	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	-2	5	-2	-5	multi-exon	FALSE	canonical	3	65	junction_1	16.3978318349985	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCCAGGGCTGGGACAC	NA	False	NA	31	True	AATAAA	-25	NA	4412574	4433816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
Isoform_61529_4	chr16	+	3781	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	-169	7	-169	-7	multi-exon	FALSE	canonical	3	65	junction_1	16.3978318349985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGCCAGGGCTGGGAC	NA	False	NA	29	True	AATAAA	-23	NA	4412407	4433814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
Isoform_61530_9	chr16	+	1830	8	NIC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-2	228	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	45.2088125777915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATCGCTAGAATATTTA	NA	False	NA	NA	False	AATAAA	-25	NA	4412574	4443016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4439472_4439571_4442333
Isoform_61538_899	chr16	+	2600	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	39	9	-5	-9	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTGTGGTCATT	NA	False	NA	26	True	NA	NA	NA	4501972	4525550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
Isoform_61541_2572	chr16	+	2465	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	31	9	12	-9	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTGTGGTCATT	NA	False	NA	26	True	NA	NA	NA	4501990	4525550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
Isoform_61542_46	chr16	+	2499	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	-3	9	-3	-9	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTGTGGTCATT	NA	False	NA	26	True	NA	NA	NA	4501956	4525550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
Isoform_61560_21	chr16	+	1695	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	41	-6	41	6	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATTTTTCCTAACTCA	NA	False	NA	15	True	CATAAA	-23	NA	4544267	4584612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
Isoform_61561_425	chr16	+	1196	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	41	493	41	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544267	4584113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
Isoform_61563_5	chr16	+	1001	4	NIC	ENSMUSG00000004070.16	novel	1730	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	190.073669928268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544225	4584113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_4544336_4582469_4582962_4583626_4583754_4583841
Isoform_61564_7	chr16	+	1288	6	NIC	ENSMUSG00000004070.16	novel	1392	6	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	152.242438235861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTCTGCCTAACAGC	NA	False	NA	10	True	AATAAA	-11	NA	4574827	4584109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_4574992_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
Isoform_61567_23	chr16	+	3186	17	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	141.440579396438	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2903	False	NA	14	True	AATAAA	-15	NA	4704091	4756160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
Isoform_61569_33	chr16	+	3163	17	FSM	ENSMUSG00000022517.18	ENSMUST00000229038.2	2250	17	-38	-875	-19	0	multi-exon	FALSE	canonical	3	40	junction_1	129.828191757415	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2905	False	NA	14	True	AATAAA	-15	NA	4704093	4756160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
Isoform_61571_94	chr16	+	3095	16	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	107.073474254312	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2928	False	NA	14	True	AATAAA	-15	NA	4704116	4756160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
Isoform_61574_88	chr16	+	3203	18	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	136.27729719254	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2928	False	NA	14	True	AATAAA	-15	NA	4704116	4756160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
Isoform_61576_181	chr16	+	3158	17	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	118.010592744889	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2928	False	NA	14	True	AATAAA	-15	NA	4704116	4756160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
Isoform_61580_284	chr16	+	3137	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	1	0	1	0	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2928	False	NA	14	True	AATAAA	-15	NA	4704116	4756160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
Isoform_61581_80	chr16	+	3161	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	-23	0	-20	0	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2904	False	NA	14	True	AATAAA	-15	NA	4704092	4756160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
Isoform_61585_622	chr16	+	3092	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	4	-1	1	0	multi-exon	FALSE	canonical	3	266	junction_15	54.4223810169636	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2928	False	NA	14	True	AATAAA	-15	NA	4704116	4756160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
Isoform_61586_55	chr16	+	3141	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	-45	-1	-45	0	multi-exon	TRUE	canonical	3	266	junction_15	54.4223810169636	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2879	False	NA	14	True	AATAAA	-15	NA	4704067	4756160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
Isoform_61596_29	chr16	+	1822	2	FSM	ENSMUSG00000022516.11	ENSMUST00000230224.2	660	2	-12	-1150	4	2	multi-exon	FALSE	canonical	3	563	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTCTGAGTGCCATG	99	False	NA	14	True	AATAAA	-20	NA	4756979	4758885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4757158_4757241
Isoform_61597_547	chr16	+	1265	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	355	-2	4	2	multi-exon	FALSE	canonical	3	527	junction_2	18	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTCTGAGTGCCATG	99	False	NA	14	True	AATAAA	-20	NA	4756979	4758885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4757158_4757241_4757503_4758059
Isoform_61599_7	chr16	+	1338	3	FSM	ENSMUSG00000022516.11	ENSMUST00000050881.10	1329	3	-6	-3	4	0	multi-exon	FALSE	canonical	3	15	junction_2	274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTTCTGAGTGCCA	99	False	NA	12	True	AATAAA	-18	NA	4756979	4758883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4757158_4757241_4757578_4758059
Isoform_61600_3	chr16	+	342	4	NIC	ENSMUSG00000096215.9	novel	382	4	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	19.6694913225759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGCCCGAGTCTGGACT	NA	False	NA	6	True	NA	NA	NA	4825174	4826168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_4825190_4825607_4825753_4825835_4825919_4826069
Isoform_61601_11	chr16	+	433	4	FSM	ENSMUSG00000096215.9	ENSMUST00000185147.8	399	4	-36	2	0	1	multi-exon	FALSE	canonical	3	31	junction_1	9.41629792788369	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGAGTCTGGACTGTG	NA	False	NA	9	True	NA	NA	NA	4825179	4826171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4825283_4825607_4825753_4825835_4825919_4826069
Isoform_61602_3	chr16	+	6501	19	FSM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	-47	1	-36	-1	multi-exon	FALSE	canonical	3	7	junction_2	22.3737197026631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATGTCTTTCCTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	4867884	4904148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4868646_4871591_4871706_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
Isoform_61603_4	chr16	+	6358	18	NIC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	23.2710818956738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTTTCCTCATTTTT	NA	False	NA	18	True	AATAAA	-18	NA	4867939	4904150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_4868646_4871591_4871706_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
Isoform_61609_45	chr16	+	6392	18	FSM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	-38	2	-38	2	multi-exon	FALSE	canonical	3	47	junction_17	11.4435578952107	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	4867882	4904151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
Isoform_61611_19	chr16	+	6283	17	FSM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	-697	3	-20	1	multi-exon	FALSE	canonical	3	39	junction_16	12.0167526291424	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTTTCCTCATTTTT	NA	False	NA	18	True	AATAAA	-18	NA	4867900	4904150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
Isoform_61612_23	chr16	+	6245	17	FSM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	-657	1	9	-1	multi-exon	FALSE	canonical	3	39	junction_16	12.0167526291424	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTCCTCATTTTTTC	NA	False	NA	20	True	AATAAA	-20	NA	4867940	4904152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
Isoform_61617_379	chr16	+	1735	13	FSM	ENSMUSG00000039427.15	ENSMUST00000100196.9	1755	13	23	-3	6	3	multi-exon	FALSE	canonical	3	181	junction_11	10.4029910228848	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAGTGTTTGCTCTGAG	1303	False	NA	20	True	AATAAA	-21	NA	5051507	5062770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
Isoform_6162_7	chr10	+	1433	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	91	329	-6	6	multi-exon	FALSE	canonical	3	31	junction_1	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTACTGTTATAATGG	NA	False	NA	NA	False	AATAAA	-19	NA	45165491	45194219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
Isoform_61621_4	chr16	+	2866	12	NIC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	-2	1	intron_retention	TRUE	canonical	3	181	junction_10	10.2255554113737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAAGTGTTTGCTCTG	1278	False	NA	18	True	AATAAA	-19	NA	5051482	5062768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
Isoform_61623_215	chr16	+	1349	11	FSM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	-7	483	-7	5	multi-exon	FALSE	canonical	3	136	junction_3	20.7113495455994	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCCTTGAGATGCTGT	NA	False	NA	8	True	AATAAA	-17	NA	8288644	8308065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
Isoform_61625_31	chr16	+	1319	10	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-7	16	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	49.6680337868021	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTGTCATTTTAGATA	NA	False	NA	19	True	AATAAA	-28	NA	8288644	8308076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_8288730_8291694_8291831_8295830_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
Isoform_61626_11	chr16	+	4581	16	FSM	ENSMUSG00000057880.13	ENSMUST00000065987.14	4636	16	52	3	0	-3	multi-exon	FALSE	canonical	2	6	junction_13	3.20138858761146	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAGAGTGAATGTGG	NA	False	NA	1	True	ATTAAA	-19	NA	8331344	8439429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_8331439_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
Isoform_6163_4	chr10	+	1772	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	70	11	-27	-11	multi-exon	FALSE	canonical	3	31	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGCCAATTTGAAGAT	NA	False	NA	NA	False	AATAAA	-13	NA	45165470	45194537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
Isoform_61630_145	chr16	+	1774	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	71	-3	7	3	multi-exon	FALSE	canonical	3	143	junction_5	22.2528088114737	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTGGCCGAATCATACA	NA	False	NA	20	True	AATAAA	-27	NA	8455608	8475398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
Isoform_61632_4	chr16	+	2726	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	76	-960	-6	960	multi-exon	FALSE	canonical	3	143	junction_5	22.2528088114737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGAAGCACACTGTAAGA	NA	False	NA	NA	False	AATAAA	-13	NA	8455613	8476355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
Isoform_61633_11	chr16	+	1717	8	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	3	19	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	59.2149319282333	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATGATCTTGCTGA	NA	False	NA	36	True	AATAAA	-43	NA	8455604	8475414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_8455693_8460601_8460714_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
Isoform_61634_11	chr16	+	5039	7	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	5	5	intron_retention	FALSE	canonical	3	143	junction_3	22.0636704914562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCCGAATCATACATG	NA	False	NA	22	True	AATAAA	-29	NA	8455591	8475400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_8455693_8460601_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
Isoform_61636_23	chr16	+	1789	3	ISM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	38	14795	38	-4	5prime_fragment	FALSE	canonical	3	177	junction_1	10	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTTCCGTGTCATA	9982	False	NA	4	True	AATAAA	-15	NA	8648001	8661991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_8648550_8649184_8649266_8660831
Isoform_61639_136	chr16	+	3313	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	38	721	38	-721	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGTTACTTTTTTCCA	9982	False	NA	22	True	ATTAAA	-17	NA	8648001	8676065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
Isoform_6164_3	chr10	+	1276	5	NNC	ENSMUSG00000019848.15	novel	1853	4	NA	NA	-7	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	10.280442597476	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTACTGTTATAATGGG	NA	False	NA	NA	False	AATAAA	-20	NA	45165490	45194220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_45165672_45190656_45191005_45191163_45191376_45192526_45192636_45193794
Isoform_61641_19	chr16	+	4077	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGGGGCTTGTCTGTA	9939	False	NA	10	True	AATAAA	-21	NA	8647958	8676786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
Isoform_61645_49	chr16	+	3356	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-5	721	-5	-721	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGTTACTTTTTTCCA	9939	False	NA	22	True	ATTAAA	-17	NA	8647958	8676065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
Isoform_61647_30	chr16	+	4028	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	38	6	38	-6	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACAACAGGGGCTTG	9982	False	NA	4	True	AATAAA	-15	NA	8648001	8676780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
Isoform_61654_190	chr16	+	506	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	12	287	12	-6	multi-exon	FALSE	canonical	3	487	junction_1	5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGCTTCTGTGTTA	NA	False	NA	23	True	AATAAA	-23	NA	9988103	9992488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_9988189_9988278_9988356_9992144
Isoform_61655_8	chr16	+	787	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	12	6	12	-6	multi-exon	FALSE	canonical	3	487	junction_1	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCAATAATTGCTCTCT	NA	False	NA	62	True	NA	NA	NA	9988103	9992769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_9988189_9988278_9988356_9992144
Isoform_61657_3	chr16	+	1006	7	NNC	ENSMUSG00000039200.17	novel	1048	9	NA	NA	1	-233	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	44.8803966114383	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCGTGTTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	10010811	10031862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10031603
Isoform_6166_139	chr10	+	3600	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	8	177	8	9	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTGCTCAGTTTCA	1786	False	NA	13	True	ATTAAA	-26	NA	45453932	45588264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_61660_6	chr16	+	3444	10	FSM	ENSMUSG00000039200.17	ENSMUST00000117220.8	1230	10	26	-2240	1	3	multi-exon	FALSE	canonical	3	57	junction_2	25.7557377042739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACTGTCTTTTATGA	NA	False	NA	10	True	AATAAA	-18	NA	10010811	10060918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424
Isoform_61661_18	chr16	+	3221	11	NNC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	36.5383360321731	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010811	10060915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10058730
Isoform_61662_71	chr16	+	2545	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	236	-3	1	3	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACTGTCTTTTATGA	NA	False	NA	10	True	AATAAA	-18	NA	10010811	10060918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
Isoform_61663_8	chr16	+	2582	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	196	0	2	0	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010771	10060915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
Isoform_61664_19	chr16	+	2159	11	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	955	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	41.4305442880009	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTCTTGAGTGGCAT	NA	False	NA	3	True	ATTAAA	-8	NA	10010811	10070297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10065308_10065462_10069241
Isoform_61665_5	chr16	+	2477	10	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	38.5931612953051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTACTGTCTTTTATG	NA	False	NA	9	True	AATAAA	-17	NA	10010811	10060917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10058424_10058511_10059409
Isoform_61666_4	chr16	+	2468	10	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	39.595173667731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010811	10060915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10054021_10054084_10055029_10055097_10058424_10058511_10059409
Isoform_61667_5	chr16	+	2387	10	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	33.4265363645911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010811	10060915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_10010890_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
Isoform_61670_672	chr16	+	2120	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-8	9	-8	-9	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAACAAGGCTTTGT	NA	False	NA	NA	False	AAGAAA	-16	NA	10229803	10242283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
Isoform_61671_191	chr16	+	3011	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-8	-882	-8	882	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	10229803	10243174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
Isoform_61678_28	chr16	+	2748	10	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-9	-9	intron_retention	FALSE	canonical	3	699	junction_1	79.9631087779365	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAACAAGGCTTTGT	NA	False	NA	NA	False	AAGAAA	-16	NA	10229802	10242283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
Isoform_6168_110	chr10	+	3672	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	40	73	40	1	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTATTTGATCTAA	1818	False	NA	9	True	AATAAA	-21	NA	45453964	45588368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_61685_3	chr16	+	1521	2	ISM	ENSMUSG00000068663.15	ENSMUST00000130148.2	704	3	25	2145	4	1562	5prime_fragment	FALSE	canonical	3	59	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTAATCCTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	10363265	10379164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_10363507_10377884
Isoform_61686_3	chr16	+	815	3	FSM	ENSMUSG00000068663.15	ENSMUST00000130148.2	704	3	2	-113	2	113	multi-exon	FALSE	canonical	3	59	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGGTGTTTTGCCTGCA	NA	False	NA	NA	False	ATTAAA	-22	NA	10363242	10381422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10363507_10377884_10378014_10381000
Isoform_61687_4	chr16	+	3724	21	ISM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	4	49149	4	1	5prime_fragment	FALSE	canonical	3	10	junction_9	19.7111009332305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCATGTGATGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	10363231	10513593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483
Isoform_61688_10	chr16	+	3742	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	59	2412	14	1	multi-exon	FALSE	canonical	3	10	junction_9	19.0952376045325	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCGGAGTCTCATTAGA	NA	False	NA	NA	False	AAAAAG	-19	NA	10363286	10560330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
Isoform_61690_6	chr16	+	6199	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	14	0	1	0	multi-exon	FALSE	canonical	3	10	junction_9	19.0952376045325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTGTGGCCTGCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	10363241	10562742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
Isoform_61691_3	chr16	+	3666	22	NNC	ENSMUSG00000068663.15	novel	6213	23	NA	NA	3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	20.4298478899686	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCGGAGTCTCATTA	NA	False	NA	NA	False	AAAAAG	-17	NA	10363230	10560328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448018_10448620_10448666_10453109_10453161_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
Isoform_61692_84	chr16	+	814	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	12	2916	3	-2916	multi-exon	FALSE	canonical	3	158	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAATTTCAGTTTGTT	NA	False	NA	8	True	NA	NA	NA	10652934	10658186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10653255_10657692
Isoform_61693_46	chr16	+	869	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	7	2866	-2	-2866	multi-exon	FALSE	canonical	3	158	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGGCATAGTGGCCTG	NA	False	NA	9	True	ATTAAA	-17	NA	10652929	10658236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10653255_10657692
Isoform_61696_10	chr16	+	2762	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	2	978	2	-978	multi-exon	TRUE	canonical	3	158	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	10652924	10660124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10653255_10657692
Isoform_61697_25	chr16	+	2904	2	FSM	ENSMUSG00000037972.8	ENSMUST00000089011.6	2872	2	-32	0	-32	0	multi-exon	FALSE	canonical	3	17	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGTCTTCACCTCTGG	NA	False	NA	17	True	AATAAA	-33	NA	10884161	10892849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_10884312_10890095
Isoform_6170_9	chr10	+	3778	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	8	-1	8	1	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTTAAGTTTGTTC	1786	False	NA	83	True	ATTAAA	-14	NA	45453932	45588442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_61700_3	chr16	+	1820	6	ISM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	5	21739	5	-635	5prime_fragment	FALSE	canonical	3	54	junction_5	9.76933979345585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTTGTCCGTGTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	12927552	12944859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258
Isoform_61701_3	chr16	+	3209	8	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	7	4256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.2352199620018	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAGAAAAAAGCAAGTTC	NA	False	NA	NA	False	NA	NA	NA	12927554	12949750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_12928005_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997
Isoform_61703_82	chr16	+	3475	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	4	1	4	-1	multi-exon	FALSE	canonical	0	0	junction_8	21.466252583998	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGGTTTCTCAGTGTT	NA	False	NA	10	True	AATAAA	-13	NA	12927551	12966597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
Isoform_61706_3	chr16	+	3819	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	-343	4	-343	-4	multi-exon	FALSE	canonical	0	0	junction_8	21.466252583998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTTGGTTTCTCAGT	NA	False	NA	7	True	AATAAA	-10	NA	12927204	12966594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
Isoform_6171_3	chr10	+	2957	23	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	26	-4693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	31.2624190198904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTATGTATGTGTG	1804	False	NA	NA	False	ATTAAA	-12	NA	45453950	45583562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45583338
Isoform_61710_6	chr16	+	3712	11	NIC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	54	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	14.2270868416553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12927601	12966596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948887_12950721_12950815_12962264_12962378_12965389
Isoform_61714_10	chr16	+	4019	16	ISM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	47	4231	22	-4231	5prime_fragment	FALSE	canonical	2	22	junction_10	14.5961943289643	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCAGGCATGCAGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	13074391	13228696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480
Isoform_61717_13	chr16	+	8240	17	FSM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	38	-2463	13	-3	multi-exon	FALSE	canonical	2	20	junction_16	15.0082008831838	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTGTGTACAGAGA	NA	False	NA	10	True	AATAAA	-19	NA	13074382	13235390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
Isoform_61719_30	chr16	+	1651	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	-42	2	-42	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTGGTACTTTGGTAT	NA	False	NA	NA	False	ATTAAA	-30	NA	13489841	13496247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13489943_13494697
Isoform_6172_5	chr10	+	3534	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	40	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_19	29.0870736107926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATATTTCTTTATTTG	1818	False	NA	3	True	AATAAA	-15	NA	45453964	45588362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_61721_5	chr16	+	1740	2	FSM	ENSMUSG00000079737.5	ENSMUST00000225585.2	1705	2	-42	7	-42	-4	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACTGGTACTTTGGT	NA	False	NA	NA	False	ATTAAA	-28	NA	13489750	13496245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13489943_13494697
Isoform_61723_3	chr16	+	3076	2	FSM	ENSMUSG00000079737.5	ENSMUST00000225585.2	1705	2	-49	-1322	-49	1322	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATATGTATGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	13489743	13497574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13489943_13494697
Isoform_61724_5	chr16	+	1626	4	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	167	13827	5	1813	5prime_fragment	FALSE	canonical	3	82	junction_1	10.3708994574027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	13489888	13507649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619
Isoform_61725_12	chr16	+	1566	7	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	142	4284	13	39	5prime_fragment	FALSE	canonical	3	82	junction_1	11.6105794668292	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGCTCCTCAGGCTC	NA	False	NA	NA	False	AATAAA	-18	NA	13489863	13517192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736
Isoform_61726_9	chr16	+	1666	7	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	44	4282	44	41	5prime_fragment	TRUE	canonical	3	82	junction_1	11.6105794668292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCCTCAGGCTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	13489765	13517194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736
Isoform_61729_48	chr16	+	2853	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	143	7	14	3	multi-exon	FALSE	canonical	3	82	junction_1	10.7760126660835	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAACCTTTATAGAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	13489864	13521469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
Isoform_6173_10	chr10	+	3437	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_19	29.0870736107926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGCATCTTTCTGTGC	1808	False	NA	4	True	ATTAAA	-17	NA	45453954	45588255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_61730_16	chr16	+	2920	9	NNC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	44	3	at_least_one_novel_splicesite	FALSE	non_canonical	3	33	junction_8	22.2145082097264	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAACCTTTATAGAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	13489765	13521469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928_13520864_13520895
Isoform_61731_35	chr16	+	2892	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	103	8	11	2	multi-exon	FALSE	canonical	3	82	junction_1	10.7760126660835	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAACCTTTATAGAGA	NA	False	NA	NA	False	AATAAA	-16	NA	13489824	13521468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
Isoform_61738_2703	chr16	+	3549	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	34	-1	34	1	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	2703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGAATTTTAG	NA	False	NA	28	True	AATAAA	-21	NA	13598610	13632704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
Isoform_61741_46	chr16	+	3618	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	-34	-2	-29	2	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGAATTTTAGC	NA	False	NA	29	True	AATAAA	-22	NA	13598542	13632705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
Isoform_6175_9	chr10	+	3611	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	29.462821508465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	1795	False	NA	8	True	AATAAA	-20	NA	45453941	45588367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_61754_44	chr16	+	3451	17	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	34	2	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	254.136989387614	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGAATTTTAGC	NA	False	NA	29	True	AATAAA	-22	NA	13598610	13632705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
Isoform_61778_388	chr16	+	1079	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	90	6	-3	-3	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATTTGTTTAGATGACT	NA	False	NA	NA	False	AATAAA	-17	NA	13637204	13653309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_6178_4	chr10	+	3508	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.5710728095454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGCATCTTTCTGTGC	1779	False	NA	4	True	ATTAAA	-17	NA	45453925	45588255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_45454247_45464475_45464531_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_61780_9	chr16	+	1220	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	-47	2	-47	1	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAGATGACTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	13637067	13653313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_61781_14	chr16	+	1033	9	NIC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	218.732963622313	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637199	13653312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_61782_84	chr16	+	1006	9	FSM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	9	-1	9	1	multi-exon	FALSE	canonical	3	118	junction_1	197.353743313878	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAGATGACTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	13637178	13653313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_61783_8	chr16	+	1104	9	FSM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	-95	5	-40	-5	multi-exon	FALSE	canonical	3	118	junction_1	197.353743313878	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAATTTGTTTAGATGA	NA	False	NA	NA	False	AATAAA	-15	NA	13637074	13653307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_61786_16	chr16	+	940	8	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	230.175975270741	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAGATGACTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	13637178	13653313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_13637301_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_61789_9	chr16	+	2359	5	FSM	ENSMUSG00000022679.14	ENSMUST00000148966.2	2315	5	-41	-3	10	3	multi-exon	FALSE	canonical	3	36	junction_1	78.6431815226215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGTATTGTCATTT	480	False	NA	12	True	NA	NA	NA	13758517	13766449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615
Isoform_6179_8	chr10	+	1722	4	ISM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	14	232550	14	-1	5prime_fragment	FALSE	canonical	3	92	junction_3	4.71404520791032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAGAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	50468778	50495031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807
Isoform_61794_4	chr16	+	2287	4	FSM	ENSMUSG00000022679.14	ENSMUST00000143697.8	580	4	-1	-1706	-1	3	multi-exon	FALSE	canonical	3	17	junction_2	74.5311269798659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGTATTGTCATTT	527	False	NA	12	True	NA	NA	NA	13758564	13766449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615
Isoform_61795_7	chr16	+	2233	4	FSM	ENSMUSG00000022679.14	ENSMUST00000143697.8	580	4	-7	-1646	0	-57	multi-exon	FALSE	canonical	3	17	junction_2	74.5311269798659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTATATCCCTGTATT	521	False	NA	-48	True	AATAGA	-17	NA	13758558	13766389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615
Isoform_61796_20	chr16	+	3031	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	36	20	-1	-20	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	527	False	NA	NA	False	NA	NA	NA	13758564	13767222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
Isoform_61798_53	chr16	+	2258	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	36	793	-1	3	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGTATTGTCATTT	527	False	NA	12	True	NA	NA	NA	13758564	13766449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
Isoform_618_535	SIRV3	+	435	3	FSM	SIRV3A	SIRV305	436	3	1	0	1	0	multi-exon	FALSE	canonical	3	1609	junction_2	828.5	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4004	6718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_+_4081_4568_4780_6570
Isoform_61804_9	chr16	+	3301	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	20	-234	-10	-7	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	511	False	NA	NA	False	NA	NA	NA	13758548	13767476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
Isoform_61807_63	chr16	+	1850	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	43	501	-10	-501	multi-exon	TRUE	canonical	3	47	junction_1	4.9152822909778	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTATATGTTCTTACC	NA	False	NA	8	True	AATAAA	-18	NA	13804510	13918863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
Isoform_61808_37	chr16	+	2141	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	43	210	-10	-210	multi-exon	FALSE	canonical	3	47	junction_1	4.9152822909778	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGCTTAGTACTCCAT	NA	False	NA	11	True	NA	NA	NA	13804510	13919154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
Isoform_61812_22	chr16	+	3715	8	ISM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	-19	-4	-19	4	intron_retention	FALSE	canonical	3	242	junction_7	27.7378397699251	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTGTTTTGTGCATT	NA	False	NA	90	True	AATAAA	-12	NA	13981189	14010786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950
Isoform_61813_18	chr16	+	3668	8	ISM	ENSMUSG00000022678.17	ENSMUST00000117958.8	1551	9	10	-18	-1	18	intron_retention	FALSE	canonical	3	242	junction_7	27.7378397699251	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGTGCGTCCTTTCAT	NA	False	NA	14	True	AATAAA	-27	NA	13981160	14010710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950
Isoform_61815_23	chr16	+	2386	9	FSM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	-47	-4	0	4	multi-exon	FALSE	canonical	3	25	junction_8	91.5818452260054	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTGTTTTGTGCATT	NA	False	NA	90	True	AATAAA	-12	NA	13981161	14010786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
Isoform_61817_448	chr16	+	2258	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	23	6	0	4	multi-exon	FALSE	canonical	3	240	junction_8	30.8696857774743	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTGTTTTGTGCATT	NA	False	NA	90	True	AATAAA	-12	NA	13981161	14010786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
Isoform_6182_61	chr10	+	7449	42	FSM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	27	284	27	-284	multi-exon	FALSE	canonical	3	60	junction_25	18.281297269701	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGCTACTCTTTTTTT	NA	False	NA	16	True	AATAAA	-21	NA	50468791	50727297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
Isoform_61826_198	chr16	+	5907	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	21	864	0	831	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGACCATTTTATTTTTAT	7179	False	NA	18	True	AGTAAA	-24	NA	14179444	14292737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
Isoform_6183_11	chr10	+	1168	6	ISM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	7	16305	-7	-16305	5prime_fragment	FALSE	canonical	3	170	junction_2	13.4669966956259	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCGAGTTTCAACGG	NA	False	NA	NA	False	NA	NA	NA	52109721	52181167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682
Isoform_61849_4	chr16	+	2020	3	FSM	ENSMUSG00000022676.8	ENSMUST00000023356.8	2021	3	-3	4	-3	-4	multi-exon	FALSE	canonical	2	2	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGTTACTCATATAC	NA	False	NA	NA	False	AATAAA	-13	NA	14523712	14527245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_14523917_14524574_14525124_14525978
Isoform_6185_40	chr10	+	1945	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	-20	1099	-20	-1099	multi-exon	TRUE	canonical	3	170	junction_2	11.5134703716994	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCGGTGTTTGTTTTC	NA	False	NA	8	True	NA	NA	NA	52109694	52196373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
Isoform_61851_3	chr16	+	5914	42	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	0	45758	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	21.2098660440976	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAAATTTCAATATTG	3502	False	NA	NA	False	NA	NA	NA	15455729	15548371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303
Isoform_61854_165	chr16	+	2946	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	-34	6	-34	-6	multi-exon	FALSE	canonical	3	76	junction_4	18.1995115929583	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGCTTTGTCTGTGACCT	NA	False	NA	13	True	AATAAA	-13	NA	16031147	16090570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
Isoform_61857_11	chr16	+	3103	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	-191	6	-191	-6	multi-exon	FALSE	canonical	3	76	junction_4	18.1995115929583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGCTTTGTCTGTGACCT	NA	False	NA	13	True	AATAAA	-13	NA	16030990	16090570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
Isoform_6186_136	chr10	+	3016	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	6	2	6	-2	multi-exon	FALSE	canonical	3	170	junction_2	11.5134703716994	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCCCTGACTTCTATT	NA	False	NA	4	True	AATAAA	-14	NA	52109720	52197470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
Isoform_61861_8	chr16	+	1438	4	FSM	ENSMUSG00000022792.17	ENSMUST00000161191.8	1412	4	1	-27	1	27	multi-exon	FALSE	canonical	3	300	junction_2	36.8088153692684	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACTCCTTCAAGTGT	9516	False	NA	NA	False	AATAAA	-44	NA	16120838	16125414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073
Isoform_61862_388	chr16	+	1565	5	FSM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	-3	12	1	-4	multi-exon	FALSE	canonical	3	300	junction_2	32.9952648117878	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTCTTTACACAAGA	9516	False	NA	12	True	AATAAA	-17	NA	16120838	16127492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
Isoform_61868_9	chr16	+	1521	5	NIC	ENSMUSG00000022792.17	novel	1528	5	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	45	junction_2	148.16270617129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTCTTTACACAAGA	9506	False	NA	12	True	AATAAA	-17	NA	16120828	16127492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_16121612_16122399_16122568_16124361_16124464_16125073_16125245_16127195
Isoform_61873_30	chr16	+	1529	5	FSM	ENSMUSG00000022792.17	ENSMUST00000159683.2	1528	5	-6	5	1	-5	multi-exon	FALSE	canonical	3	45	junction_2	137.095769446034	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATTTCTTTACACAAG	9516	False	NA	11	True	AATAAA	-16	NA	16120838	16127491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073_16125245_16127195
Isoform_61875_68	chr16	+	2939	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	108.44980917969	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688633	16710848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_61877_126	chr16	+	2937	19	FSM	ENSMUSG00000022779.17	ENSMUST00000232581.2	2950	19	13	0	3	0	multi-exon	FALSE	canonical	3	71	junction_1	102.489023802552	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGAGCCTGGGACCTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	16688633	16710849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_61881_400	chr16	+	2852	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	287	junction_1	39.4304608859032	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688633	16710848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_61883_12	chr16	+	3351	17	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-2	intron_retention	TRUE	canonical	3	287	junction_1	39.9538796614296	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688633	16710847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_61893_12	chr16	+	3037	19	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	54	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	112.156209957803	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688757	16710847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_16688920_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_61894_13	chr16	+	2962	19	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	112.156209957803	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688832	16710847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_16688920_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_61897_35	chr16	+	2905	18	FSM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	162	6	-22	-1	multi-exon	FALSE	canonical	3	41	junction_1	94.325542449951	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688806	16710848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_61904_269	chr16	+	4813	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	107	2	2	-2	multi-exon	FALSE	canonical	3	74	junction_7	6.62093155786084	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGTGCCACTTGGAT	NA	False	NA	33	True	AATAAA	-15	NA	16714439	16745226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
Isoform_61908_89	chr16	+	1917	8	FSM	ENSMUSG00000063358.18	ENSMUST00000115731.10	1747	8	-157	-13	28	13	multi-exon	FALSE	canonical	3	566	junction_5	32.3728281124773	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAGATTTGAAAGG	NA	False	NA	NA	False	AATAAA	-8	NA	16801273	16856917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177
Isoform_61911_208	chr16	+	2898	9	FSM	ENSMUSG00000063358.18	ENSMUST00000232611.2	2390	9	23	-531	23	531	multi-exon	FALSE	canonical	3	119	junction_8	172.340097989412	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAAGATTCAGTGTTGAT	NA	False	NA	35	True	AATAAA	-25	NA	16801268	16863144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856299_16861549
Isoform_61912_38	chr16	+	5064	9	FSM	ENSMUSG00000063358.18	ENSMUST00000232611.2	2390	9	27	-2701	27	-3	multi-exon	FALSE	canonical	3	119	junction_8	172.340097989412	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGTCTCACTGTGTT	NA	False	NA	14	True	AAAAAG	-30	NA	16801272	16865314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856299_16861549
Isoform_61915_1182	chr16	+	2904	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	23	2172	23	532	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGATTCAGTGTTGATT	NA	False	NA	36	True	AATAAA	-26	NA	16801268	16863145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
Isoform_61917_180	chr16	+	5068	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	28	3	28	-3	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGTCTCACTGTGTT	NA	False	NA	14	True	AAAAAG	-30	NA	16801273	16865314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
Isoform_61937_4	chr16	+	3186	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	448	-312	-14	3	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGTTCCCAGGGTGGGG	NA	False	NA	NA	False	AATAAA	-18	NA	16888007	16904912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
Isoform_61938_12	chr16	+	2479	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	448	395	-14	0	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGATTTTGCGTTGGC	NA	False	NA	NA	False	TATAAA	-20	NA	16888007	16904205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
Isoform_61940_8	chr16	+	2826	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	449	47	-13	-47	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCCTTTATTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	16888008	16904553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
Isoform_61944_7	chr16	+	1577	3	FSM	ENSMUSG00000041774.17	ENSMUST00000232344.2	1580	3	1	2	1	-2	multi-exon	FALSE	canonical	3	101	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGCTGGTTTATAAAG	NA	False	NA	10	True	AATAAA	-14	NA	16964840	16966708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16965011_16965096_16965257_16965461
Isoform_61946_41	chr16	+	1480	4	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-2	0	1	0	intron_retention	FALSE	canonical	3	70	junction_3	17.4547032821147	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	12	True	AATAAA	-16	NA	16964840	16966710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660
Isoform_61947_56	chr16	+	1299	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-2	0	1	0	multi-exon	FALSE	canonical	3	70	junction_3	15.4171171105366	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	12	True	AATAAA	-16	NA	16964840	16966710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
Isoform_61948_27	chr16	+	1322	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-30	5	0	-5	multi-exon	TRUE	canonical	3	70	junction_3	15.4171171105366	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTTGGCTGGTTTATA	NA	False	NA	7	True	AATAAA	-11	NA	16964812	16966705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
Isoform_61957_83	chr16	+	6349	3	FSM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	-2	7	-2	-7	multi-exon	FALSE	canonical	3	75	junction_1	2.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATGTGGAGTCTGTG	6309	False	NA	10	True	ATTAAA	-12	NA	17051433	17081287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17051595_17072831_17072931_17075198
Isoform_61958_11	chr16	+	6393	3	FSM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	-39	0	-39	0	multi-exon	FALSE	canonical	3	75	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTCTGTGACTATAC	6272	False	NA	17	True	ATTAAA	-19	NA	17051396	17081294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17051595_17072831_17072931_17075198
Isoform_6196_16	chr10	+	2831	10	FSM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	-38	2	-20	0	multi-exon	FALSE	canonical	3	38	junction_1	48.9166587797331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCTGACTTCTATTTG	NA	False	NA	6	True	AATAAA	-16	NA	52109694	52197472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_52109932_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
Isoform_61961_61	chr16	+	1404	10	FSM	ENSMUSG00000055692.22	ENSMUST00000164950.11	1631	10	227	0	-5	0	multi-exon	FALSE	canonical	3	122	junction_4	58.6725586266908	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094167	17096525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_61963_19	chr16	+	1561	9	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	132	junction_3	51.3997811279387	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094164	17096525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_61965_6	chr16	+	1329	9	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	85.6007264864031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094164	17096525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17094333_17094497_17094622_17094700_17094752_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_61966_20	chr16	+	1636	8	FSM	ENSMUSG00000055692.22	ENSMUST00000232092.2	1627	8	-10	1	-10	-1	multi-exon	FALSE	canonical	3	181	junction_2	39.2189042297154	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094162	17096524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_61967_6	chr16	+	1386	8	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-37	-3	intron_retention	TRUE	canonical	3	40	junction_7	76.8576739227536	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTCTCTTCTTTGGGA	NA	False	NA	8	True	AATAAA	-19	NA	17094135	17101090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17100678
Isoform_61969_4	chr16	+	1449	9	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	122	junction_3	60.8675560130354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094200	17096524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17094333_17094497_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_61970_5	chr16	+	1643	8	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-11	0	intron_retention	FALSE	canonical	3	132	junction_2	51.6732275843071	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094161	17096525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17094333_17094497_17094752_17094825_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_61972_20	chr16	+	1710	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	186	junction_5	33.1331488928468	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094167	17096524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_61973_4	chr16	+	1389	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	40	junction_6	82.2464116069645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTCTCTTCTTTGGGA	NA	False	NA	8	True	AATAAA	-19	NA	17094211	17101090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17100678
Isoform_61974_13	chr16	+	1820	6	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	230	junction_3	17.5658760100372	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094167	17096525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
Isoform_61976_3	chr16	+	1669	5	NIC	ENSMUSG00000055692.22	novel	1721	7	NA	NA	-11	-8	intron_retention	FALSE	canonical	3	40	junction_4	99.492147931382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAAGGGTCTCTTCTT	NA	False	NA	3	True	AATAAA	-14	NA	17094161	17101085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17094333_17094497_17095115_17095205_17095457_17095532_17095756_17100678
Isoform_61977_6	chr16	+	1320	4	FSM	ENSMUSG00000055692.22	ENSMUST00000232636.2	825	4	-1	-494	-1	-1	multi-exon	FALSE	canonical	3	265	junction_2	6.12825877028341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094957	17096524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17095115_17095205_17095457_17095532_17095756_17095835
Isoform_61978_6	chr16	+	1036	4	NIC	ENSMUSG00000055692.22	novel	781	7	NA	NA	6	-3	intron_retention	FALSE	canonical	3	40	junction_3	108.001028801684	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTCTCTTCTTTGGGA	NA	False	NA	8	True	AATAAA	-19	NA	17094964	17101090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17095115_17095205_17095457_17095532_17095756_17100678
Isoform_6198_311	chr10	+	2414	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	10	2181	10	-2181	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATTTTGGTCCAGTC	NA	False	NA	7	True	AATAAA	-8	NA	52293652	52314098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
Isoform_61980_74	chr16	+	3385	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	55	7	55	-7	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTACTTTGCTTGACTA	1439	False	NA	NA	False	AGTAAA	-8	NA	17223904	17248684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
Isoform_61985_259	chr16	+	5061	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	-20	1	-20	-1	multi-exon	FALSE	canonical	3	254	junction_1	8	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGGTGTTTCAGTGTCT	3439	False	NA	19	True	AATAAA	-26	NA	17269830	17305297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17270653_17286756_17287223_17301524
Isoform_6199_209	chr10	+	3616	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	12	977	12	-977	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGTAGTATGTGAATGT	NA	False	NA	9	True	AATAAA	-22	NA	52293654	52315302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
Isoform_61998_8	chr16	+	4551	2	FSM	ENSMUSG00000006134.5	ENSMUST00000231629.2	780	2	-466	-3305	23	-2	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCGGTGTTTCAGTGTC	3482	False	NA	18	True	AATAAA	-25	NA	17269873	17305296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17270653_17301524
Isoform_62_549	ERCC-00043	+	1004	1	FSM	ERCC-00043A	DQ516787	1007	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	549	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	TATAAA	-11	NA	2	1006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00043_+_0_1000
Isoform_62001_3	chr16	+	2521	21	NIC	ENSMUSG00000022763.19	novel	2688	21	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.95972971738975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAACTGTGTCCTAGTGT	4196	False	NA	NA	False	ATTAAA	-13	NA	17307474	17325343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17307543_17309156_17309348_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318353_17318399_17318610_17318708_17318789_17318903_17319316_17319404_17319954_17320047_17320129_17320261_17320359_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321507_17321626_17322781_17322881_17323547_17323624_17324093_17324199_17324990
Isoform_62002_26	chr16	+	2700	21	FSM	ENSMUSG00000022763.19	ENSMUST00000023448.15	2688	21	-15	3	-15	1	multi-exon	FALSE	canonical	1	3	junction_11	2.45916652547159	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTCCTAGTGTAAT	4233	False	NA	NA	False	ATTAAA	-16	NA	17307511	17325346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17307756_17309156_17309348_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318353_17318399_17318610_17318708_17318789_17318903_17319316_17319404_17319954_17320047_17320129_17320261_17320359_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321507_17321626_17322781_17322881_17323547_17323624_17324093_17324199_17324990
Isoform_62004_5	chr16	+	3180	21	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.3575386802169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTCTCCGAGTCTTC	NA	False	NA	31	True	NA	NA	NA	17326823	17344196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337191_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
Isoform_62006_249	chr16	+	3109	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	284	1	-1	1	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTCTCCGAGTCTTC	NA	False	NA	31	True	NA	NA	NA	17326835	17344196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
Isoform_62008_5	chr16	+	3396	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	-5	3	-5	-1	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTGTCTCCGAGTCT	NA	False	NA	29	True	NA	NA	NA	17326546	17344194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
Isoform_62012_8	chr16	+	3255	20	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	0	152	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	83.0439592563786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437220	17461363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17437299_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
Isoform_62017_591	chr16	+	3202	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	1	1329	1	151	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437221	17461362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
Isoform_62022_67	chr16	+	4533	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	1	-2	1	1	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATCTCCCTGTTTTGGT	NA	False	NA	16	True	NA	NA	NA	17437221	17462693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
Isoform_62023_11	chr16	+	3308	18	NIC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	0	151	intron_retention	FALSE	canonical	3	223	junction_5	25.2659213567786	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437217	17461362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459694_17460032_17460162_17460337
Isoform_62028_32	chr16	+	3116	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	152	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	64.5519023490851	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437221	17461363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
Isoform_62046_22	chr16	+	2917	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	-7	356	-7	-356	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTGTTTAGCAGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	17577519	17596714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
Isoform_62051_809	chr16	+	2554	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	113.988912716203	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTACAGTCTGAGTT	NA	False	NA	18	True	AATAAA	-27	NA	17577535	17611245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_62052_141	chr16	+	2620	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	113.988912716203	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTACAGTCTGAGTT	NA	False	NA	18	True	AATAAA	-27	NA	17577469	17611245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_62060_312	chr16	+	2566	7	FSM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	-5	-17	-5	-1	multi-exon	FALSE	canonical	0	0	junction_1	179.822520527572	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTACAGTCTGAGTT	NA	False	NA	18	True	AATAAA	-27	NA	17577535	17611245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_62066_90	chr16	+	3211	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	164.993350034344	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTACAGTCTGAGTT	NA	False	NA	18	True	AATAAA	-27	NA	17577534	17611245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_17578215_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_62079_3	chr16	+	3272	11	FSM	ENSMUSG00000012017.5	ENSMUST00000012161.5	3308	11	33	3	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.53968501984006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTCCAGTGCTCTAATT	NA	False	NA	NA	False	AATAAA	-11	NA	17615178	17626154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17615392_17620230_17620290_17620379_17620482_17620643_17621164_17621245_17621465_17621600_17621730_17622169_17622274_17622349_17622468_17622672_17622789_17624212_17624366_17624615
Isoform_62081_3	chr16	+	2065	2	ISM	ENSMUSG00000012017.5	ENSMUST00000231383.2	2641	5	1403	-1	-4	0	intron_retention	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTGCTCTAATTACT	3129	False	NA	NA	False	AATAAA	-14	NA	17622668	17626157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_17622789_17624212
Isoform_62082_3	chr16	+	1762	2	FSM	ENSMUSG00000059280.5	ENSMUST00000075371.5	759	2	-1002	-1	-1002	1	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTCTGGCTGGTTTGT	55	False	NA	NA	False	ATTAAA	-15	NA	17797289	17799138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17798475_17798561
Isoform_62083_136	chr16	+	1024	5	FSM	ENSMUSG00000003531.16	ENSMUST00000066027.14	1050	5	11	15	6	0	multi-exon	FALSE	canonical	3	112	junction_3	141.891463802443	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTGTGCTACCTAG	NA	False	NA	10	True	AATAAA	-16	NA	17884317	17889207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887945_17888096_17888741
Isoform_62085_461	chr16	+	1057	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	31	-2	-9	2	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTCCTAGTGACTCTGG	NA	False	NA	32	True	AATAAA	-38	NA	17884297	17889229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
Isoform_62087_10	chr16	+	1339	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	24	-277	-16	8	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGCTGTCCCCAGTGT	NA	False	NA	NA	False	AATAAA	-26	NA	17884290	17889504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
Isoform_62091_6	chr16	+	1902	2	FSM	ENSMUSG00000043811.6	ENSMUST00000059589.6	1938	2	35	1	35	-1	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGGCCTCTTGGGCTG	NA	False	NA	6	True	AATAAA	-15	NA	17945540	17970271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17945767_17968595
Isoform_62094_599	chr16	+	2255	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	109	3	-10	1	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTGTGGTGAACCAG	378	False	NA	5	True	AATAAA	-19	NA	18066855	18071363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_62095_316	chr16	+	2347	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	20	0	20	0	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	289	False	NA	8	True	AATAAA	-22	NA	18066766	18071366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_62106_15	chr16	+	2354	12	FSM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	-119	0	-59	0	multi-exon	FALSE	canonical	3	14	junction_1	76.7194093342424	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	329	False	NA	8	True	AATAAA	-22	NA	18066806	18071366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_62109_14	chr16	+	2598	11	FSM	ENSMUSG00000022721.20	ENSMUST00000127239.8	2805	11	203	4	-1	0	multi-exon	FALSE	canonical	3	250	junction_9	16.6400120192264	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	268	False	NA	4	True	AATAAA	-18	NA	18066745	18071362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_62115_51	chr16	+	3929	19	FSM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	55	714	-37	106	multi-exon	FALSE	canonical	3	22	junction_2	90.4391378459624	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTGTCTTCTGCCT	NA	False	NA	9	True	ATTAAA	-12	NA	18166100	18225112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_62129_609	chr16	+	3520	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	1	711	1	104	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGCCTGTCTTCTGC	NA	False	NA	7	True	ATTAAA	-10	NA	18210481	18225110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_62130_24	chr16	+	4288	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-55	-1	-22	1	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGACTCATTCT	NA	False	NA	19	True	NA	NA	NA	18210425	18225822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_62131_209	chr16	+	3576	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-55	711	-22	104	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGCCTGTCTTCTGC	NA	False	NA	7	True	ATTAAA	-10	NA	18210425	18225110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_62132_68	chr16	+	4255	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-21	-2	6	2	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGTGACTCATTCTT	NA	False	NA	20	True	NA	NA	NA	18210459	18225823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_62133_30	chr16	+	3399	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	2	104	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	67.3057369190935	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGCCTGTCTTCTGC	NA	False	NA	7	True	ATTAAA	-10	NA	18210482	18225110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18224356
Isoform_62138_22	chr16	+	561	4	FSM	ENSMUSG00000075704.18	ENSMUST00000131303.8	532	4	-30	1	-6	1	multi-exon	FALSE	canonical	3	135	junction_1	7.03957069398096	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTCCCTGACTGTCTC	NA	False	NA	11	True	NA	NA	NA	18245181	18256561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251
Isoform_62139_4	chr16	+	1239	11	FSM	ENSMUSG00000075704.18	ENSMUST00000115604.8	1235	11	-7	3	-7	-3	multi-exon	FALSE	canonical	3	88	junction_9	21.8229237271269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTTGGTGCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	18245180	18275215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773
Isoform_62140_100	chr16	+	1885	18	FSM	ENSMUSG00000075704.18	ENSMUST00000115606.9	1905	18	15	5	-6	1	multi-exon	FALSE	canonical	3	67	junction_11	21.0007414599702	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATGTCTGCGTGTGCTG	NA	False	NA	NA	False	AATAAA	-16	NA	18245181	18297818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
Isoform_62141_6	chr16	+	1782	17	FSM	ENSMUSG00000075704.18	ENSMUST00000206606.3	1809	17	24	3	0	0	multi-exon	FALSE	canonical	2	5	junction_13	32.1674694955945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	18245190	18297817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18293431_18293504_18294271_18294370_18296400_18296608_18297607
Isoform_62144_62	chr16	+	1405	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	83	-3	12	1	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAAGGTGGGAACTTC	NA	False	NA	18	True	AATAAA	-20	NA	18317545	18383293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_62145_15	chr16	+	1468	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	18	-1	18	1	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCTCAAGGTGGGAACT	NA	False	NA	16	True	AATAAA	-18	NA	18317480	18383291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_62147_7	chr16	+	1262	7	NIC	ENSMUSG00000000884.18	novel	1485	8	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	117.185631466585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCTCAAGGTGGGAACT	NA	False	NA	16	True	AATAAA	-18	NA	18317545	18383291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18317602_18317795_18317891_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_62149_4	chr16	+	2618	3	FSM	ENSMUSG00000086965.2	ENSMUST00000146673.2	865	3	-13	-1740	-13	1740	multi-exon	FALSE	canonical	3	20	junction_2	96	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACTTTGGATTTCATTT	NA	False	NA	124	True	TTTAAA	-27	NA	18317637	18322148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18317702_18317795_18317891_18319689
Isoform_62152_193	chr16	+	1380	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	33	2136	19	1	multi-exon	FALSE	canonical	3	212	junction_1	38.76564858485	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAAGGTGGGAACTTC	NA	False	NA	18	True	AATAAA	-20	NA	18317670	18383293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_62155_20	chr16	+	1355	8	NIC	ENSMUSG00000000884.18	novel	3592	9	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	96.1913484166018	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTGAAGCCTCAAGGTG	NA	False	NA	10	True	AATAAA	-12	NA	18317683	18383285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_62158_8	chr16	+	1238	7	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	97.958182688102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCAAGGTGGGAACTT	NA	False	NA	17	True	AATAAA	-19	NA	18317670	18383292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18317702_18317795_18317891_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_62163_65	chr16	+	1966	12	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	122.971810248132	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTAGTTTGATATGGTA	NA	False	NA	4	True	AATAAA	-14	NA	18631041	18654005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
Isoform_62166_275	chr16	+	1970	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	20	6	-7	-1	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTAGTTTGATATGGTA	NA	False	NA	4	True	AATAAA	-14	NA	18631063	18654005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
Isoform_6217_4	chr10	+	1246	3	FSM	ENSMUSG00000112132.2	ENSMUST00000218737.2	1855	3	8	601	8	-601	multi-exon	FALSE	canonical	3	22	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATCACTGTAACTCTA	5702	False	NA	NA	False	AATAAA	-14	NA	53285985	53299767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_53286053_53297604_53297685_53298668
Isoform_62172_99	chr16	+	1277	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	3	1	0	-1	multi-exon	FALSE	canonical	3	86	junction_1	45.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTCTCAATTAGGGT	NA	False	NA	16	True	ATTAAA	-16	NA	18655330	18658909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18655370_18655455_18655624_18657839
Isoform_62176_53	chr16	+	1363	2	FSM	ENSMUSG00000071632.11	ENSMUST00000190776.2	930	2	-74	-359	0	-1	multi-exon	FALSE	canonical	3	177	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTCTCAATTAGGGT	NA	False	NA	16	True	ATTAAA	-16	NA	18655330	18658909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18655624_18657839
Isoform_62178_3	chr16	+	2154	14	ISM	ENSMUSG00000022702.17	ENSMUST00000153397.8	1911	16	-13	7069	-13	0	5prime_fragment	FALSE	canonical	3	17	junction_3	38.6634699079822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGCTGATTATCCAGA	NA	False	NA	7	True	AATAAA	-16	NA	18696006	18746761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_18696270_18713523_18713587_18714652_18714678_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
Isoform_62179_4	chr16	+	4075	26	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	36.1651766206112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695983	18789059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18696270_18713523_18713587_18714652_18714678_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
Isoform_62180_3	chr16	+	2272	14	NIC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	39.0372299919421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGCTGATTATCCA	NA	False	NA	5	True	AATAAA	-14	NA	18696005	18746759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18696270_18713523_18713587_18714652_18714797_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
Isoform_62181_9	chr16	+	4191	26	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-36	-3	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	36.3301747862572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18695983	18789056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18696270_18713523_18713587_18714652_18714797_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
Isoform_62182_59	chr16	+	2169	13	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	168	42281	-36	17	5prime_fragment	FALSE	canonical	3	103	junction_2	13.4109718762909	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCTGTGTCTGAATGC	NA	False	NA	24	True	AATAAA	-33	NA	18695983	18746778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
Isoform_62185_3	chr16	+	2670	13	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	-350	42298	-321	0	5prime_fragment	FALSE	canonical	3	103	junction_2	13.4109718762909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGCTGATTATCCAGA	NA	False	NA	7	True	AATAAA	-16	NA	18695465	18746761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
Isoform_62186_72	chr16	+	4047	25	FSM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	168	3	-36	-3	multi-exon	FALSE	canonical	3	33	junction_15	30.9156277902725	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18695983	18789056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
Isoform_62187_11	chr16	+	4556	25	FSM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	-340	2	-311	-2	multi-exon	FALSE	canonical	3	33	junction_15	30.9156277902725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATTTGCCTTCCCTGCC	NA	False	NA	5	True	AATAAA	-21	NA	18695475	18789057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
Isoform_62188_11	chr16	+	2361	13	NIC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	28.1553231596127	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGCTGATTATCCAGA	NA	False	NA	7	True	AATAAA	-16	NA	18695983	18746761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
Isoform_62189_17	chr16	+	4254	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-33	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_15	33.301547344764	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATTTGCCTTCCCTGCC	NA	False	NA	5	True	AATAAA	-21	NA	18695986	18789057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
Isoform_6219_44	chr10	+	1101	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	46	1054	46	-1	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGTTGTAAAGGTGTTG	1567	False	NA	51	True	ATTAAA	-22	NA	53473093	53484267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_62190_3	chr16	+	4809	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-355	-2	combination_of_known_junctions	TRUE	canonical	3	33	junction_15	33.301547344764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATTTGCCTTCCCTGCC	NA	False	NA	5	True	AATAAA	-21	NA	18695431	18789057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
Isoform_62194_5	chr16	+	4392	5	NIC	ENSMUSG00000022686.15	novel	4872	6	NA	NA	-79	17	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	44.4690903887183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCCTGTGTGGGCATC	NA	False	NA	24	True	AATAAA	-32	NA	19579069	19591230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_19579228_19579390_19579578_19582900_19583104_19583857_19583965_19587493
Isoform_62196_12	chr16	+	4282	5	FSM	ENSMUSG00000022686.15	ENSMUST00000121344.8	4175	5	142	-249	-49	19	multi-exon	FALSE	canonical	2	7	junction_3	34.3829536253068	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGTGTGGGCATCAT	NA	False	NA	26	True	AATAAA	-34	NA	19579099	19591232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19584250_19584372_19587493
Isoform_62200_39	chr16	+	4182	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	93	-17	-72	17	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCCTGTGTGGGCATC	NA	False	NA	24	True	AATAAA	-32	NA	19579076	19591230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
Isoform_62202_4	chr16	+	4433	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	117	-292	-48	2	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGCGTTACTTGGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	19579100	19591505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
Isoform_62203_5	chr16	+	4006	3	NIC	ENSMUSG00000022686.15	novel	4258	4	NA	NA	-26	-6	combination_of_known_splicesites	TRUE	canonical	1	7	junction_2	33	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCATCAGTAATGTGA	NA	False	NA	1	True	AATAAA	-9	NA	19579122	19591207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_19579228_19579390_19579578_19587493
Isoform_62204_20	chr16	+	4118	3	FSM	ENSMUSG00000022686.15	ENSMUST00000131557.8	444	3	-31	-3643	-31	18	multi-exon	FALSE	canonical	3	81	junction_1	14.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTGTGTGGGCATCA	NA	False	NA	25	True	AATAAA	-33	NA	19579304	19591231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19579578_19583857_19583965_19587493
Isoform_62206_7	chr16	+	4077	3	FSM	ENSMUSG00000022686.15	ENSMUST00000119468.2	2229	3	9	-1857	9	18	multi-exon	FALSE	canonical	3	9	junction_1	50.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTGTGTGGGCATCA	NA	False	NA	25	True	AATAAA	-33	NA	19579812	19591231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19580045_19583857_19583965_19587493
Isoform_62209_73	chr16	+	4382	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	33	3757	1	-3757	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTTAGTATTT	NA	False	NA	NA	False	TATAAA	-16	NA	19916324	19944214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
Isoform_6221_41	chr10	+	1104	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-6	1103	-6	-50	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTCTTTTATATG	1515	False	NA	2	True	ATTAAA	-12	NA	53473041	53484218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_62211_17	chr16	+	4558	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	33	3581	1	-3581	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTACCTGAATCCTAGAAA	NA	False	NA	NA	False	ATTAAA	-11	NA	19916324	19944390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
Isoform_62212_3	chr16	+	8142	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	30	0	-2	0	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGAGTTTTAAGTTTG	NA	False	NA	9	True	ATTAAA	-17	NA	19916321	19947971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
Isoform_62215_39	chr16	+	4315	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	1	-3761	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAATTTGTATTTTAGT	NA	False	NA	NA	False	TATAAA	-12	NA	19916324	19944210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
Isoform_62216_16	chr16	+	4503	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	1	-3573	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCCTAGAAAATTAACTT	NA	False	NA	NA	False	ATTAAA	-19	NA	19916324	19944398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
Isoform_62217_5	chr16	+	8079	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	5	-4	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTGATGAGTTTTAAG	NA	False	NA	5	True	ATTAAA	-13	NA	19916317	19947967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
Isoform_62218_66	chr16	+	6071	31	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	37.8088173137784	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTCTGAGCTGGAA	NA	False	NA	11	True	AATAAA	-17	NA	19959843	20051318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
Isoform_62220_3	chr16	+	1963	8	ISM	ENSMUSG00000041215.17	ENSMUST00000232172.2	5671	12	1	18979	1	983	5prime_fragment	FALSE	canonical	3	113	junction_5	27.0132242746823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTCAAAGTTCTTCTT	NA	False	NA	NA	False	AATAAA	-27	NA	19959843	19990927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940
Isoform_62224_96	chr16	+	6080	31	FSM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	27	5	1	-5	multi-exon	FALSE	canonical	3	106	junction_10	25.0014444027185	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTCTGAGCTGGAA	NA	False	NA	11	True	AATAAA	-17	NA	19959843	20051318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
Isoform_62225_5	chr16	+	5928	30	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	10	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	37.819554046182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959826	20051319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
Isoform_62226_17	chr16	+	5961	30	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	44.8334744143461	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959833	20051317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
Isoform_62228_24	chr16	+	5960	30	FSM	ENSMUSG00000041215.17	ENSMUST00000090052.11	5997	30	31	6	1	-6	multi-exon	FALSE	canonical	3	35	junction_1	34.7469534332064	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959843	20051317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
Isoform_6224_81	chr10	+	989	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	46	1166	46	77	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCTCTAATGTGTTA	1567	False	NA	6	True	TATAAA	-19	NA	53473093	53484155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_62244_11160	chr16	+	2479	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	75	0	75	0	multi-exon	FALSE	canonical	3	2657	junction_7	154.998007155648	11160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
Isoform_62246_1722	chr16	+	2522	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	32	0	32	0	multi-exon	TRUE	canonical	3	2657	junction_7	154.998007155648	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317598	20328073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
Isoform_6225_22	chr10	+	1183	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-37	1055	-37	-2	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGGTTGTAAAGGTGTT	1484	False	NA	50	True	ATTAAA	-21	NA	53473010	53484266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_6227_6	chr10	+	1327	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-185	1059	10	-6	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGACCAGGTTGTAAAGG	1336	False	NA	46	True	ATTAAA	-17	NA	53472862	53484262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_62282_18	chr16	+	2530	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	-9	-2	-9	2	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGTGTCTCTACTCATC	NA	False	NA	NA	False	AATAAA	-39	NA	20335722	20350423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
Isoform_62284_14	chr16	+	4909	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	-51	-2339	-51	0	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	15	True	NA	NA	NA	20335680	20352760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
Isoform_62285_103	chr16	+	4803	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	49	-2333	-33	-6	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	9	True	NA	NA	NA	20335780	20352754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
Isoform_62286_4	chr16	+	4041	16	FSM	ENSMUSG00000003233.13	ENSMUST00000171572.9	3983	16	-59	1	23	-1	multi-exon	FALSE	canonical	2	3	junction_15	48.314893034021	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	14	True	NA	NA	NA	20335754	20352759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20350241_20351033
Isoform_62288_3905	chr16	+	1901	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	28	151	-13	-151	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	3905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCTGGCTAAATGTTA	1381	False	NA	NA	False	AATAAA	-11	NA	20354255	20362655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
Isoform_62289_938	chr16	+	2051	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	26	3	-15	-3	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGTTTTGTTTGGGTC	1379	False	NA	14	True	NA	NA	NA	20354253	20362803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
Isoform_6229_12	chr10	+	1249	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-153	1105	42	-52	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCTTCTCTTTTATA	1368	False	NA	0	True	ATTAAA	-10	NA	53472894	53484216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_6230_5	chr10	+	2073	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	117	11	117	-11	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCTCATTTT	1638	False	NA	NA	False	AATAAA	-24	NA	53473164	53485310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_6231_17	chr10	+	2119	2	FSM	ENSMUSG00000047669.9	ENSMUST00000063138.8	2140	2	15	6	15	-6	multi-exon	FALSE	canonical	2	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTTATAAAGCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	55983027	55992970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_55983126_55990949
Isoform_62315_969	chr16	+	2452	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	81	557	14	4	multi-exon	FALSE	canonical	3	293	junction_13	17.6705970470723	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCTCTCTGCTCGTTC	NA	False	NA	8	True	ATTAAA	-17	NA	20367407	20379572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
Isoform_62316_23	chr16	+	2529	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	3	558	3	3	multi-exon	TRUE	canonical	3	293	junction_13	17.6705970470723	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCCTCTCTGCTCGTT	NA	False	NA	7	True	ATTAAA	-16	NA	20367329	20379571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
Isoform_62318_57	chr16	+	3001	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	88	1	-11	-1	multi-exon	FALSE	canonical	3	293	junction_13	17.6705970470723	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACACGTGCAAGAGCAT	NA	False	NA	9	True	AATAAA	-18	NA	20367414	20380128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
Isoform_6232_41	chr10	+	3069	2	FSM	ENSMUSG00000050953.11	ENSMUST00000068581.9	3071	2	3	-1	1	1	multi-exon	FALSE	canonical	3	36	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAACCTGCATGTCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	56253428	56266512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_56253615_56263629
Isoform_62325_4	chr16	+	1748	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	0	-614	0	614	multi-exon	FALSE	canonical	3	220	junction_2	23	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAATGTGCTGAGG	5899	False	NA	NA	False	AGTAAA	-17	NA	20430342	20438375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20430571_20436375_20436660_20437139
Isoform_62326_211	chr16	+	987	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	7	140	-1	2	multi-exon	FALSE	canonical	3	220	junction_2	23	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTTCTAGGATTTT	5906	False	NA	22	True	AATACA	-32	NA	20430349	20437621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20430571_20436375_20436660_20437139
Isoform_62327_23	chr16	+	1130	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	6	-2	-2	2	multi-exon	FALSE	canonical	3	220	junction_2	23	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCTTTATGCTTCTGAT	5905	False	NA	14	True	NA	NA	NA	20430348	20437763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20430571_20436375_20436660_20437139
Isoform_62328_17	chr16	+	3118	19	FSM	ENSMUSG00000022842.19	ENSMUST00000003898.12	3152	19	36	-2	13	2	multi-exon	FALSE	canonical	3	19	junction_18	7.37781124490401	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGTCTCTTCCTTCA	NA	False	NA	15	True	AATAAA	-15	NA	20448613	20464667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
Isoform_6233_25	chr10	+	3129	2	FSM	ENSMUSG00000050953.11	ENSMUST00000068581.9	3071	2	-57	-1	-57	1	multi-exon	FALSE	canonical	3	36	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAACCTGCATGTCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	56253368	56266512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_56253615_56263629
Isoform_62331_5	chr16	+	3225	18	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	-4	4	intron_retention	TRUE	canonical	3	19	junction_17	7.16005837868374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCTTCCTTCAGT	NA	False	NA	17	True	AATAAA	-17	NA	20448590	20464669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463187_20463809
Isoform_62336_8717	chr16	+	2920	21	FSM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	40	1	-12	1	multi-exon	FALSE	canonical	3	2673	junction_8	225.447882003801	8717	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTCTGTCTATTTCCTG	NA	False	NA	22	True	AATAAA	-15	NA	20470441	20482163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
Isoform_6235_35	chr10	+	2406	13	NIC	ENSMUSG00000019878.9	novel	2430	14	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	71.7650487509221	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGTTTGTTGAGTCG	NA	False	NA	16	True	AATAAA	-17	NA	57362475	57388963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57385211_57387539_57387625_57387998
Isoform_6238_118	chr10	+	2620	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-16	0	-5	0	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCCTTCTCATTGTT	NA	False	NA	13	True	NA	NA	NA	57362475	57389231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
Isoform_62383_654	chr16	+	5433	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	471	junction_14	285.078235903651	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCTCTTTACTG	NA	False	NA	15	True	ATTAAA	-15	NA	20491520	20511632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
Isoform_62391_1063	chr16	+	5391	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	839	junction_14	252.911559316567	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491558	20511631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
Isoform_62392_205	chr16	+	5472	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	839	junction_14	252.911559316567	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491477	20511631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
Isoform_6240_10	chr10	+	2648	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-43	-1	-32	1	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCTTCTCATTGTTG	NA	False	NA	14	True	NA	NA	NA	57362448	57389232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
Isoform_6241_173	chr10	+	2352	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-16	268	-5	2	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGTTTGTTGAGTCG	NA	False	NA	16	True	AATAAA	-17	NA	57362475	57388963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
Isoform_62410_49	chr16	+	5350	32	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_2	344.240701791684	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491505	20511631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
Isoform_62416_153	chr16	+	5402	32	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	236	junction_1	347.040851712798	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCTCTTTACTG	NA	False	NA	15	True	ATTAAA	-15	NA	20491494	20511632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
Isoform_6242_12	chr10	+	2375	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-39	268	-28	2	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGTTTGTTGAGTCG	NA	False	NA	16	True	AATAAA	-17	NA	57362452	57388963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
Isoform_62423_314	chr16	+	5415	32	FSM	ENSMUSG00000045983.17	ENSMUST00000073840.12	5394	32	-21	0	5	0	multi-exon	FALSE	canonical	3	236	junction_1	320.871770382026	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491477	20511631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
Isoform_6250_80	chr10	+	6527	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	12	8	1	0	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCATTTTCATGACTA	NA	False	NA	4	True	ATTAAA	-14	NA	58091330	58141413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
Isoform_6251_4	chr10	+	6413	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	-53	187	-53	170	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGCCTTTTGAAGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	58091265	58141234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
Isoform_6252_35	chr10	+	6550	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	-11	8	-11	0	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCATTTTCATGACTA	NA	False	NA	4	True	ATTAAA	-14	NA	58091307	58141413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
Isoform_62520_6	chr16	+	2409	7	FSM	ENSMUSG00000050821.15	ENSMUST00000232207.2	962	7	33	-1480	4	0	multi-exon	FALSE	canonical	0	0	junction_3	0.687184270936277	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTTGTCATTGG	NA	False	NA	NA	False	ATTAAA	-27	NA	20512033	20521794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20512223_20513517_20513580_20514488_20514632_20517671_20517766_20518017_20518201_20518378_20518496_20520173
Isoform_62524_700	chr16	+	813	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	137	0	-28	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	1041	False	NA	15	True	ATTAAA	-16	NA	20536551	20541017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
Isoform_62526_15	chr16	+	1785	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	-835	0	-835	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	69	False	NA	15	True	ATTAAA	-16	NA	20535579	20541017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
Isoform_62529_24	chr16	+	894	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	56	0	56	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	960	False	NA	15	True	ATTAAA	-16	NA	20536470	20541017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
Isoform_6253_4	chr10	+	6492	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	-48	103	-48	-93	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACTTTGATTACAA	NA	False	NA	-91	True	AATAAA	-18	NA	58091270	58141318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
Isoform_62530_22	chr16	+	1207	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	-258	1	-258	-1	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTCCATTGTCATTG	646	False	NA	14	True	ATTAAA	-15	NA	20536156	20541016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
Isoform_62532_5	chr16	+	3615	23	FSM	ENSMUSG00000006958.15	ENSMUST00000007171.13	3275	23	-343	3	-343	-1	multi-exon	FALSE	canonical	1	3	junction_1	2.73332661424962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTTTGAGGTAGGCT	2879	False	NA	NA	False	ATTAAA	-17	NA	20551533	20561131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
Isoform_62533_3	chr16	+	4266	23	FSM	ENSMUSG00000006958.15	ENSMUST00000007171.13	3275	23	-993	2	-993	0	multi-exon	TRUE	canonical	1	3	junction_1	2.73332661424962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTTTGAGGTAGGCTC	2229	False	NA	NA	False	ATTAAA	-18	NA	20550883	20561132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
Isoform_62534_311	chr16	+	4158	16	FSM	ENSMUSG00000005958.16	ENSMUST00000006112.7	4185	16	27	0	27	0	multi-exon	FALSE	canonical	3	140	junction_8	11.1167541225945	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	11	True	AATAAA	-14	NA	21023531	21042054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
Isoform_62535_247	chr16	+	4192	16	FSM	ENSMUSG00000005958.16	ENSMUST00000006112.7	4185	16	-7	0	-7	0	multi-exon	FALSE	canonical	3	140	junction_8	11.1167541225945	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	11	True	AATAAA	-14	NA	21023497	21042054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
Isoform_62543_14	chr16	+	3651	37	NNC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	13	12452	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_35	35.0999784566077	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGGGACAAGAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	21241931	21364367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21363920_21364024_21364116
Isoform_62544_301	chr16	+	4939	47	FSM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	0	-4	0	1	multi-exon	FALSE	canonical	3	107	junction_1	17.1577937561462	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCAGTCTCTTGGTT	NA	False	NA	17	True	AATAAA	-23	NA	21241950	21463426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
Isoform_62545_9	chr16	+	4903	46	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_44	28.0979240039782	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGCCAGTCTCTTGGT	NA	False	NA	16	True	AATAAA	-22	NA	21241931	21463425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21459428_21459510_21462870
Isoform_62546_20	chr16	+	4904	47	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.942753613068	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGCCAGTCTCTTGGT	NA	False	NA	16	True	AATAAA	-22	NA	21241931	21463425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_21241976_21253489_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
Isoform_6255_4	chr10	+	6705	24	NNC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	-52	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	26.4716562049038	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATTTTCATGACTAC	NA	False	NA	5	True	ATTAAA	-15	NA	58091266	58141414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_58091394_58091650_58091705_58092641_58092727_58093683_58093797_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
Isoform_62553_10	chr16	+	3592	5	FSM	ENSMUSG00000097290.10	ENSMUST00000180830.3	3557	5	-42	7	3	-2	multi-exon	FALSE	canonical	3	16	junction_4	55.9838146253004	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTAGTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	21613099	21624873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21613197_21614599_21614726_21619464_21619587_21620030_21620107_21621702
Isoform_62555_3	chr16	+	2251	4	NNC	ENSMUSG00000097290.10	novel	767	4	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.2440191206499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGATGGGTTGAAAGGT	NA	False	NA	25	True	AATAAA	-30	NA	21613112	21627785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_21613197_21614599_21614726_21625720_21626558_21626581
Isoform_62556_10	chr16	+	742	4	FSM	ENSMUSG00000097290.10	ENSMUST00000211443.2	767	4	21	4	-3	-4	multi-exon	FALSE	canonical	3	20	junction_2	60.8896999134957	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGGGTTGAAAGGTC	NA	False	NA	26	True	AATAAA	-31	NA	21613088	21627786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21613197_21614599_21614726_21625720_21625870_21627427
Isoform_62557_41	chr16	+	587	3	FSM	ENSMUSG00000097290.10	ENSMUST00000209449.2	580	3	5	-12	0	-2	multi-exon	FALSE	canonical	3	94	junction_2	32	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGGTTGAAAGGTCCA	NA	False	NA	28	True	AATAAA	-33	NA	21613096	21627788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21613197_21614599_21614726_21627427
Isoform_62565_46	chr16	+	2987	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	-103	at_least_one_novel_splicesite	TRUE	non_canonical	3	132	junction_1	89.1873344306094	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTGTCAATTTCAGA	2202	False	NA	9	True	ATTAAA	-18	NA	21828233	21866528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_21828286_21828306_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_62566_137	chr16	+	4386	19	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	1	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	131.171843278715	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTTTCTGCAGCCGAG	2231	False	NA	21	True	AGTAAA	-28	NA	21828262	21868005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_21828286_21828306_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
Isoform_62567_584	chr16	+	3079	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	29	1391	1	-3	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTCTGATAATTTTTC	2231	False	NA	19	True	AATAAA	-19	NA	21828262	21866628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_62569_30	chr16	+	3171	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	-65	1393	-65	-5	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2137	False	NA	17	True	AATAAA	-17	NA	21828168	21866626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_62575_64	chr16	+	3144	17	FSM	ENSMUSG00000022855.10	ENSMUST00000231724.2	2135	17	1	-1010	1	-5	multi-exon	FALSE	canonical	3	37	junction_2	111.888616489793	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2231	False	NA	17	True	AATAAA	-17	NA	21828262	21866626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_62580_16	chr16	+	3020	16	FSM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	-144	7	-3	-7	multi-exon	FALSE	canonical	3	19	junction_1	119.348341700531	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2227	False	NA	15	True	AATAAA	-15	NA	21828258	21866624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_62587_419	chr16	+	1878	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	42	7	21	-7	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTACTTTTCTGTATCT	NA	False	NA	23	True	AATAAA	-27	NA	22676636	22691131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
Isoform_62588_20	chr16	+	1907	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	1	19	1	-19	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTGTTTAGAAGGTAC	NA	False	NA	11	True	AATAAA	-15	NA	22676595	22691119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
Isoform_62589_520	chr16	+	1612	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	42	273	21	-191	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTTTCTTTTTCCTG	NA	False	NA	33	True	AATACA	-26	NA	22676636	22690865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
Isoform_6259_586	chr10	+	4216	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	109	2	109	-2	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGTTACATATCATTT	NA	False	NA	8	True	AATAAA	-17	NA	58159396	58260511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
Isoform_62590_40	chr16	+	1957	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	41	-71	20	-6	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCAGGTGGCTTTGTCT	NA	False	NA	101	True	NA	NA	NA	22676635	22691209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
Isoform_62598_65	chr16	+	1279	6	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	1828	4	-524	-4	3prime_fragment	FALSE	canonical	3	93	junction_1	9.66643677887566	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTCATGTTCCTT	NA	False	NA	18	True	AATAAA	-43	NA	22712984	22718189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_22713186_22713544_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
Isoform_62600_6	chr16	+	1171	5	ISM	ENSMUSG00000022868.7	ENSMUST00000231932.2	848	6	2213	-539	-501	-4	3prime_fragment	FALSE	canonical	3	13	junction_1	40.6540280907071	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTCATGTTCCTT	NA	False	NA	18	True	AATAAA	-43	NA	22713007	22718189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_22713186_22713943_22714108_22715257_22715360_22716877_22716962_22717546
Isoform_62602_341	chr16	+	1628	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	-119	11	-71	10	multi-exon	FALSE	canonical	0	0	junction_2	163.600059877241	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTTGACTGAAACTGGA	NA	False	NA	24	True	AATAAA	-30	NA	22737012	22758517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_62603_321	chr16	+	1655	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	-146	11	-98	10	multi-exon	FALSE	canonical	0	0	junction_2	163.600059877241	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTTGACTGAAACTGGA	NA	False	NA	24	True	AATAAA	-30	NA	22736985	22758517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_62610_22	chr16	+	1382	7	NIC	ENSMUSG00000022871.14	novel	1520	8	NA	NA	-71	-1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	163.643582893501	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTTCAACCTGTTGA	NA	False	NA	13	True	AATAAA	-19	NA	22737012	22758506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_22737341_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_62611_64	chr16	+	1697	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	-136	11	-136	10	multi-exon	FALSE	canonical	0	0	junction_2	190.973018716129	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTTGACTGAAACTGGA	NA	False	NA	24	True	AATAAA	-30	NA	22736947	22758517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_62612_136	chr16	+	1622	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	-71	21	-71	0	multi-exon	FALSE	canonical	0	0	junction_2	190.973018716129	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22737012	22758507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_62617_17	chr16	+	1724	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	-175	23	-175	-2	multi-exon	TRUE	canonical	0	0	junction_2	190.973018716129	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTTCAACCTGTTG	NA	False	NA	12	True	AATAAA	-18	NA	22736908	22758505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_62619_72	chr16	+	1577	8	FSM	ENSMUSG00000022871.14	ENSMUST00000023587.12	1544	8	-18	-15	-18	10	multi-exon	FALSE	canonical	0	0	junction_2	202.97702694982	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTTGACTGAAACTGGA	NA	False	NA	24	True	AATAAA	-30	NA	22738968	22758517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22739246_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_62623_42	chr16	+	648	2	ISM	ENSMUSG00000022871.14	ENSMUST00000167399.2	1421	8	16048	-1	16048	1	3prime_fragment	FALSE	canonical	3	505	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCAACCTGTTGACT	NA	False	NA	15	True	AATAAA	-21	NA	22756542	22758508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_22756708_22758025
Isoform_62624_52	chr16	+	3166	10	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	517.640158153648	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
Isoform_62626_52	chr16	+	2712	11	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	579.353916013347	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
Isoform_62629_62	chr16	+	2008	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	653.897178967119	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
Isoform_62634_313	chr16	+	1897	11	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	441	junction_1	507.107927368524	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
Isoform_6264_25	chr10	+	4316	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	7	4	7	-4	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTGTGTTACATATCAT	NA	False	NA	6	True	AATAAA	-15	NA	58159294	58260509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
Isoform_62645_63	chr16	+	1757	10	FSM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	-20	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	631.938131836603	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
Isoform_62655_181	chr16	+	3164	10	ISM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-1	-1	0	0	intron_retention	FALSE	canonical	3	1315	junction_4	273.717210111296	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
Isoform_62657_179	chr16	+	2709	11	FSM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-1	0	0	0	multi-exon	FALSE	canonical	3	675	junction_10	433.482883168413	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
Isoform_62660_164	chr16	+	2005	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	564.272309855287	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
Isoform_62662_134	chr16	+	2001	12	FSM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	-19	-17	0	0	multi-exon	FALSE	canonical	3	179	junction_11	605.093586095477	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
Isoform_62664_1172	chr16	+	1894	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	314	0	0	0	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
Isoform_62678_84	chr16	+	3023	9	ISM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	4	190	0	0	intron_retention	FALSE	canonical	3	563	junction_3	488.360122629807	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
Isoform_62680_89	chr16	+	2570	10	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	575.550128674544	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
Isoform_62682_81	chr16	+	1865	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	666.107979234598	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
Isoform_62684_44	chr16	+	1860	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_10	702.387962596171	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
Isoform_62686_327	chr16	+	1753	10	FSM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	4	190	0	0	multi-exon	FALSE	canonical	3	563	junction_3	486.088189935799	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
Isoform_6273_95	chr10	+	10215	29	FSM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-57	-550	-55	550	multi-exon	FALSE	canonical	3	152	junction_18	69.5662490738439	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATTTAAAACATTTGAT	NA	False	NA	18	True	AATAAA	-21	NA	58282686	58330728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
Isoform_62735_17	chr16	+	4337	8	FSM	ENSMUSG00000022885.17	ENSMUST00000023601.14	4506	8	166	3	166	-3	multi-exon	FALSE	canonical	2	4	junction_2	3.46410161513775	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTGCTTCTCTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	23043655	23179095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_23043980_23075708_23075852_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378
Isoform_62738_26	chr16	+	1942	8	FSM	ENSMUSG00000022514.15	ENSMUST00000174202.8	2306	8	-42	406	7	-406	multi-exon	FALSE	canonical	3	10	junction_5	3.88087934491604	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTCTTGTGTGAGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	26400460	26520700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837
Isoform_6274_8	chr10	+	10618	29	FSM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-62	-948	-60	948	multi-exon	TRUE	canonical	3	152	junction_18	69.5662490738439	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATCTAGTTAGACCA	NA	False	NA	-3	True	AATAAA	-7	NA	58282681	58331126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
Isoform_62740_14	chr16	+	4567	11	FSM	ENSMUSG00000022514.15	ENSMUST00000023156.13	4520	11	-48	1	5	-1	multi-exon	FALSE	canonical	1	2	junction_10	6.68505796534331	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTTTGTGCATGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	26400458	26536493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
Isoform_62744_83	chr16	+	6963	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	125	1	14	-1	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGCCTACTGTTTTCA	NA	False	NA	12	True	AATAAA	-21	NA	27207743	27270967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
Isoform_62749_3	chr16	+	7089	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCCTACTGTTTTCAT	NA	False	NA	13	True	AATAAA	-22	NA	27207618	27270968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
Isoform_62754_119	chr16	+	3352	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398189	29470697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_62755_60	chr16	+	6052	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	2	-295	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATTCTATTATTGGAG	NA	False	NA	6	True	ATTAAA	-17	NA	29398199	29473407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_62760_70	chr16	+	3241	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-8	-3	-6	0	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398189	29470697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_62761_35	chr16	+	5961	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-8	-2723	-6	-285	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGGAGAGTATCTTTT	NA	False	NA	16	True	ATTAAA	-27	NA	29398189	29473417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_62768_194	chr16	+	3297	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACGTGTGTTCCAGGCA	NA	False	NA	8	True	AATAAA	-18	NA	29398189	29470696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_62769_96	chr16	+	6005	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-6	-298	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	3	True	ATTAAA	-14	NA	29398189	29473404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_62774_149	chr16	+	3166	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	59	3005	1	0	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398210	29470697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_62775_12	chr16	+	3221	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	3	3006	3	-1	multi-exon	TRUE	canonical	3	145	junction_5	76.2263931339013	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACGTGTGTTCCAGGCA	NA	False	NA	8	True	AATAAA	-18	NA	29398154	29470696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_62777_74	chr16	+	5873	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	59	298	1	-298	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	3	True	ATTAAA	-14	NA	29398210	29473404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_62795_1002	chr16	+	1463	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	4	1	4	-1	multi-exon	FALSE	canonical	3	729	junction_2	50.3388517946129	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAGAACTGATTATT	NA	False	NA	15	True	AATAAA	-16	NA	29884161	29886613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
Isoform_62804_11	chr16	+	1041	2	FSM	ENSMUSG00000022528.9	ENSMUST00000161839.2	653	2	89	-477	89	0	multi-exon	FALSE	canonical	3	25	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	False	NA	16	True	AATAAA	-17	NA	29885244	29886614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_29885361_29885689
Isoform_62806_67	chr16	+	3099	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	23	0	19	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCAGAGTGGCTTGGAAT	NA	False	NA	17	True	AATAAA	-17	NA	31247588	31277719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
Isoform_62807_368	chr16	+	3054	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	65	3	21	1	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCGCAGAGTGGCTTGG	NA	False	NA	14	True	AATAAA	-14	NA	31247630	31277716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
Isoform_62808_18	chr16	+	3288	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	-166	0	-166	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCAGAGTGGCTTGGAAT	NA	False	NA	17	True	AATAAA	-17	NA	31247399	31277719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
Isoform_62809_434	chr16	+	1653	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	65	1404	21	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGTGCATGAAA	NA	False	NA	25	True	AGTAAA	-15	NA	31247630	31276315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
Isoform_62811_79	chr16	+	1710	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	9	1403	5	1	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTGTGCATGAAAG	NA	False	NA	26	True	AGTAAA	-16	NA	31247574	31276316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
Isoform_62828_44	chr16	+	4755	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.1576052817719	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482722	31692167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62833_17	chr16	+	4712	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	76.3517753559143	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482763	31692168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62834_12	chr16	+	4777	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	76.3517753559143	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482697	31692167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62837_40	chr16	+	4825	26	FSM	ENSMUSG00000022770.18	ENSMUST00000064477.14	4663	26	-159	-3	-29	0	multi-exon	FALSE	canonical	1	100	junction_1	67.3545841053154	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482697	31692167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62840_59	chr16	+	4796	26	FSM	ENSMUSG00000022770.18	ENSMUST00000064477.14	4663	26	-133	0	-3	0	multi-exon	FALSE	canonical	1	100	junction_1	67.3545841053154	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATATGTTAAATGTGTCT	NA	False	NA	16	True	AATAAA	-14	NA	31482723	31692164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62841_22	chr16	+	4796	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	71.9072291219735	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482723	31692167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62842_22	chr16	+	4757	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	71.9072291219735	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482762	31692167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62845_16	chr16	+	4682	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.3319772338318	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482697	31692168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62849_12	chr16	+	4626	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	76.7834142789531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482749	31692167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62850_6	chr16	+	4685	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-43	-4	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	76.7834142789531	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATATGTTAAATGT	NA	False	NA	12	True	AATAAA	-10	NA	31482683	31692160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62852_68	chr16	+	4701	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	67.2157466463196	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482723	31692168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62854_5	chr16	+	4087	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-52	3	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	67.2157466463196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTAACTATGGGAATTA	NA	False	NA	NA	False	ACTAAA	-1	NA	31482674	31691505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62858_19	chr16	+	4723	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.0681462806789	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482697	31692167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
Isoform_62866_4	chr16	+	3165	16	FSM	ENSMUSG00000022780.6	ENSMUST00000023464.6	4133	16	18	950	18	-950	multi-exon	FALSE	canonical	1	2	junction_8	1.29957257930786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTTTGCTCTCCTGGTC	1743	False	NA	NA	False	AATGAA	-17	NA	31697645	31716888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31697794_31698940_31699096_31700685_31700786_31702578_31702762_31703761_31703919_31705017_31705086_31706229_31706418_31706927_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
Isoform_62867_4	chr16	+	3547	16	FSM	ENSMUSG00000022780.6	ENSMUST00000023464.6	4133	16	68	518	68	-518	multi-exon	FALSE	canonical	1	2	junction_8	1.29957257930786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAGGAGCAAACAGCCA	1793	False	NA	NA	False	AATAAA	-13	NA	31697695	31717320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31697794_31698940_31699096_31700685_31700786_31702578_31702762_31703761_31703919_31705017_31705086_31706229_31706418_31706927_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
Isoform_62869_256	chr16	+	1701	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	80	289	-8	-289	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATCGGAGTCTCGCTAG	NA	False	NA	NA	False	AATAAA	-20	NA	31767410	31777001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
Isoform_62870_30	chr16	+	1990	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	80	0	-8	0	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTATTTCCTCGC	NA	False	NA	4	True	AATAAA	-15	NA	31767410	31777290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
Isoform_62876_105	chr16	+	1676	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	36	6	36	-6	multi-exon	FALSE	canonical	3	74	junction_3	4.96655480858378	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTACTGGCTTTTCTTC	6528	False	NA	20	True	AATAAA	-20	NA	31918653	31926881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
Isoform_62878_52	chr16	+	1136	3	FSM	ENSMUSG00000022787.11	ENSMUST00000178573.8	1153	3	18	-1	-8	1	multi-exon	FALSE	canonical	3	50	junction_1	36.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAACAGTAATTTTGG	NA	False	NA	10	True	AATAAA	-11	NA	32066062	32075893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32066086_32070640_32071137_32075276
Isoform_62880_24	chr16	+	1380	3	FSM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	6	8	6	1	multi-exon	FALSE	canonical	3	19	junction_1	52	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAACAGTAATTTTGG	NA	False	NA	10	True	AATAAA	-11	NA	32066076	32075893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32066344_32070640_32071137_32075276
Isoform_62881_5	chr16	+	1483	3	NIC	ENSMUSG00000022787.11	novel	1394	3	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	60.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAACAGTAATTTTGG	NA	False	NA	10	True	AATAAA	-11	NA	32066076	32075893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_32066447_32070640_32071137_32075276
Isoform_62885_5	chr16	+	1813	4	ISM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	11	11176	11	536	5prime_fragment	FALSE	canonical	3	16	junction_3	3.09120616516523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	32096289	32108548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936
Isoform_62887_18	chr16	+	3888	6	FSM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	63	-19	63	19	multi-exon	FALSE	canonical	3	5	junction_5	6.9108610172684	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCATTTGAATTTTT	NA	False	NA	32	True	AATAAA	-33	NA	32096341	32119743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
Isoform_62891_6	chr16	+	4465	6	FSM	ENSMUSG00000014074.18	ENSMUST00000171474.2	4460	6	-4	-1	-2	1	multi-exon	TRUE	canonical	3	5	junction_5	6.9108610172684	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATTGGCTCTCATGT	NA	False	NA	NA	False	ATTAAA	-11	NA	32096274	32120253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
Isoform_62896_163	chr16	+	3325	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	4	6984	4	-1132	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAAAGTTCTCTCTTTTG	8256	False	NA	NA	False	NA	NA	NA	32151078	32205581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
Isoform_62897_11	chr16	+	2030	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	-34	8317	-34	-2465	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGGAAAAGCATACTTTA	8218	False	NA	NA	False	AATAAA	-20	NA	32151040	32204248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
Isoform_62900_6	chr16	+	4815	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	0	5498	0	354	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTTGTTTGACTATTT	8252	False	NA	NA	False	NA	NA	NA	32151074	32207067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
Isoform_62904_6	chr16	+	4492	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	-32	5853	-32	-1	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGCCTTGTGTGCTG	8220	False	NA	NA	False	NA	NA	NA	32151042	32206712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
Isoform_62905_20	chr16	+	3255	10	FSM	ENSMUSG00000053774.10	ENSMUST00000232137.2	4384	10	-8	1137	3	-1137	multi-exon	FALSE	canonical	3	7	junction_3	51.2071561357021	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGTCAAAGTTCTCTC	8255	False	NA	NA	False	NA	NA	NA	32151077	32205576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
Isoform_62909_46	chr16	+	595	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	37	206	-7	-202	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTGTTAAGTTGTAT	NA	False	NA	12	True	AATAAA	-23	NA	32238556	32247711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
Isoform_62910_62	chr16	+	764	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	74	0	-19	0	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238593	32247917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
Isoform_62912_11	chr16	+	835	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	3	0	3	0	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238522	32247917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
Isoform_62913_7	chr16	+	665	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	-33	206	-33	-202	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTGTTAAGTTGTAT	NA	False	NA	12	True	AATAAA	-23	NA	32238486	32247711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
Isoform_62914_3	chr16	+	713	6	NNC	ENSMUSG00000014075.16	novel	838	5	NA	NA	16	-193	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	122.726688214096	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTGTATATGTTTAAA	NA	False	NA	21	True	AATAAA	-32	NA	32238535	32247720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_32238746_32241637_32241772_32244058_32244129_32244971_32245060_32245675_32245740_32247573
Isoform_62915_7	chr16	+	859	6	NNC	ENSMUSG00000014075.16	novel	838	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	122.726688214096	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238586	32247917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_32238746_32241637_32241772_32244058_32244129_32244971_32245060_32245675_32245740_32247573
Isoform_62917_6	chr16	+	698	4	FSM	ENSMUSG00000014075.16	ENSMUST00000080316.8	720	4	23	-1	23	1	multi-exon	FALSE	canonical	3	12	junction_2	127.027556065603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTCATGAATAGTTTTT	NA	False	NA	6	True	AATAAA	-18	NA	32238586	32247914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32238746_32241637_32241772_32245675_32245740_32247573
Isoform_62920_16	chr16	+	1745	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-9	3053	-6	-20	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCTCAAAGC	2480	False	NA	NA	False	NA	NA	NA	32249732	32290835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
Isoform_62921_4	chr16	+	1995	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-23	2817	-20	216	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTGGGAGCTCTTGT	2466	False	NA	NA	False	NA	NA	NA	32249718	32291071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
Isoform_62923_3	chr16	+	4443	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-18	364	-15	2	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAGAAATAAGTT	2471	False	NA	NA	False	ATTAAA	-15	NA	32249723	32293524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
Isoform_62924_3	chr16	+	5150	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-9	-352	-6	352	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTATGTCTCTTCTCCT	2480	False	NA	NA	False	GATAAA	-12	NA	32249732	32294240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
Isoform_62925_3	chr16	+	3980	3	ISM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	36268	12	4252	-12	3prime_fragment	FALSE	canonical	3	68	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTTTCAATTTCCT	8360	False	NA	10	True	AATAAA	-15	NA	32286009	32293876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_32286039_32288868_32289058_32290114
Isoform_62927_656	chr16	+	4821	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	65	4	2	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8022	False	NA	14	True	AATAAA	-15	NA	32427802	32451608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
Isoform_62930_149	chr16	+	4844	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	40	6	-23	-2	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTGTCGGACTCAT	7997	False	NA	12	True	AATAAA	-13	NA	32427777	32451606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
Isoform_62932_39	chr16	+	4718	18	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	103.076851767224	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8022	False	NA	14	True	AATAAA	-15	NA	32427802	32451608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
Isoform_62933_25	chr16	+	6037	17	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	399	junction_7	25.2140059044571	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8022	False	NA	14	True	AATAAA	-15	NA	32427802	32451608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
Isoform_62962_6	chr16	+	5056	16	FSM	ENSMUSG00000022791.20	ENSMUST00000115124.9	4516	16	-540	0	167	0	multi-exon	FALSE	canonical	3	42	junction_11	42.4157203561761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32462858	32502311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
Isoform_62963_6	chr16	+	5223	16	FSM	ENSMUSG00000022791.20	ENSMUST00000115124.9	4516	16	-708	1	-1	0	multi-exon	TRUE	canonical	3	42	junction_11	42.4157203561761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32462690	32502310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
Isoform_62966_30	chr16	+	4967	15	FSM	ENSMUSG00000022791.20	ENSMUST00000115123.9	4226	15	-742	1	-207	0	multi-exon	FALSE	canonical	3	77	junction_4	34.8270508281674	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32462901	32502310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
Isoform_62969_13	chr16	+	5165	15	FSM	ENSMUSG00000022791.20	ENSMUST00000115123.9	4226	15	-940	1	12	0	multi-exon	FALSE	canonical	3	77	junction_4	34.8270508281674	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32462703	32502310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
Isoform_6297_17	chr10	+	2161	12	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-22	34581	-22	-34581	5prime_fragment	FALSE	canonical	3	46	junction_9	6.71497647731614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAGTATTTAAGTGAT	921	False	NA	NA	False	NA	NA	NA	58333747	58377485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619
Isoform_62974_5	chr16	+	4071	15	NIC	ENSMUSG00000022791.20	novel	4049	15	NA	NA	31	1	intron_retention	FALSE	canonical	1	1	junction_1	45.5893381735471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGCGTGCCCGCCTGTTT	6260	False	NA	27	True	AATAAA	-23	NA	32477773	32502312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_32477901_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
Isoform_62984_4	chr16	+	1741	8	NNC	ENSMUSG00000022791.20	novel	1732	5	NA	NA	-1727	-6	intron_retention	TRUE	non_canonical	0	0	junction_1	69.0731644042484	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTACTCTCGCGTGCCC	2132	False	NA	19	True	AATAAA	-15	NA	32490244	32502304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_32490253_32494367_32494376_32498402_32499486_32499568_32499626_32499717_32499814_32499969_32499984_32501764_32502085_32502149
Isoform_6299_55	chr10	+	2476	16	FSM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-22	1	-22	-1	multi-exon	FALSE	canonical	3	28	junction_12	10.0598210719674	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTAGAGTCCCTTCTT	921	False	NA	NA	False	AATAAA	-23	NA	58333747	58412065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
Isoform_62991_3	chr16	+	2992	5	NNC	ENSMUSG00000022791.20	novel	1732	5	NA	NA	887	0	intron_retention	TRUE	canonical	0	0	junction_1	76.4771207617023	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	1357	False	NA	26	True	AATAAA	-22	NA	32497635	32502311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_32497871_32497901_32499626_32499717_32499814_32499969_32500098_32501502
Isoform_62996_764	chr16	+	3452	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	34	826	2	-826	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATTGAGTTGTGGTTT	NA	False	NA	12	True	AATAAA	-35	NA	32698184	32728419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
Isoform_62998_178	chr16	+	3477	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	9	826	1	-826	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATTGAGTTGTGGTTT	NA	False	NA	12	True	AATAAA	-35	NA	32698159	32728419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
Isoform_63008_58	chr16	+	3829	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	34	449	2	-449	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTAGTTTTGTGGTATT	NA	False	NA	6	True	AATAAA	-15	NA	32698184	32728796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
Isoform_6302_60	chr10	+	2622	15	FSM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	74	1347	2	1	multi-exon	FALSE	canonical	3	22	junction_8	56.7996838163088	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCTCTGTGTGGTATT	NA	False	NA	19	True	NA	NA	NA	59159191	59207779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
Isoform_63023_125	chr16	+	5506	21	FSM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	26	4	-1	-4	multi-exon	FALSE	canonical	3	40	junction_20	10.2853050513828	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATGGTTTTCTTGCC	NA	False	NA	12	True	AATAAA	-21	NA	32734495	32836013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
Isoform_63025_5	chr16	+	5365	20	NIC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	16.4029927679418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATGGTTTTCTTGCC	NA	False	NA	12	True	AATAAA	-21	NA	32734486	32836013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
Isoform_63028_442	chr16	+	456	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	11	24	-2	0	multi-exon	FALSE	canonical	3	3858	junction_1	2402.68870226669	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876833	32880535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_63029_24	chr16	+	646	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	-179	24	-179	0	multi-exon	FALSE	canonical	3	3858	junction_1	2402.68870226669	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876643	32880535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_63031_1065	chr16	+	460	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	39	11	6	0	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876874	32880535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_63032_43	chr16	+	501	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	-2	11	-2	0	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876833	32880535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_63034_191	chr16	+	519	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	-19	0	9	0	multi-exon	FALSE	canonical	3	927	junction_1	3609.33805392346	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876877	32880535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_6304_359	chr10	+	2620	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	2	296	2	-1	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTCTCTGTGTGGTA	NA	False	NA	17	True	NA	NA	NA	59159191	59207777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
Isoform_63043_20	chr16	+	6148	17	FSM	ENSMUSG00000022802.3	ENSMUST00000023497.3	6147	17	-1	0	-1	0	multi-exon	FALSE	canonical	2	5	junction_12	4.16645832812474	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTAGCTTGTCTTTACCT	4778	False	NA	NA	False	AATAAA	-14	NA	32882889	32948065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927383_32927544_32930147_32930279_32937370_32937582_32943891
Isoform_63046_339	chr16	+	4510	13	FSM	ENSMUSG00000022807.10	ENSMUST00000039733.10	4521	13	11	0	11	0	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005451	33063682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
Isoform_6305_32	chr10	+	2717	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	-94	295	-22	0	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59159095	59207778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
Isoform_63053_11	chr16	+	4353	12	NIC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	44.2104284470426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005431	33063682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
Isoform_6306_22	chr10	+	2995	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	2	-79	2	79	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	59159191	59208152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
Isoform_63061_873	chr16	+	2456	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-2	707	0	-3	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTTGTATTATTTTAA	9281	False	NA	23	True	AATAAA	-23	NA	33071811	33119932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
Isoform_63063_118	chr16	+	2598	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-1	564	1	140	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTTATGGTTTTGC	9282	False	NA	8	True	ACTAAA	-18	NA	33071812	33120075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
Isoform_63076_39	chr16	+	4171	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-60	5719	-60	1	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACGAATGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	33201145	33319014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
Isoform_63085_57	chr16	+	4080	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	31	5719	4	1	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACGAATGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	33201236	33319014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
Isoform_63092_9	chr16	+	7878	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-32	1984	-32	-1984	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTTGTATAGAACT	NA	False	NA	3	True	ATTAAA	-15	NA	33201173	33322749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
Isoform_63093_9	chr16	+	7688	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	30	2112	3	-2112	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGTAGGCTGCTAGGA	NA	False	NA	NA	False	AATAAA	-17	NA	33201235	33322621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
Isoform_63096_8	chr16	+	8640	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	31	1159	4	-1159	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTCTAGCTGAATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	33201236	33323574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
Isoform_63098_11	chr16	+	2655	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	1	0	1	0	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33337698	33483778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_63099_35	chr16	+	2607	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	47	2	47	0	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTATTTTTTATTA	NA	False	NA	7	True	AATAAA	-17	NA	33337744	33483776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_63102_5	chr16	+	2450	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	46	-11	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	17.7080882335979	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTAATTTTATTGTTTT	NA	False	NA	-4	True	AATAAA	-6	NA	33337743	33483765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_63105_10	chr16	+	2496	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	46	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	14.3611648397877	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33337743	33483778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_63106_3	chr16	+	2338	12	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	51	-4	combination_of_known_splicesites	FALSE	canonical	3	5	junction_7	20.1441089146912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTGTTTTATTTTTT	NA	False	NA	3	True	AATAAA	-13	NA	33337748	33483772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_63108_8	chr16	+	2585	13	FSM	ENSMUSG00000035506.17	ENSMUST00000059056.15	3166	13	-146	727	-95	0	multi-exon	FALSE	canonical	3	33	junction_4	11.0754984838908	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33338552	33483778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_63111_3	chr16	+	2446	12	NIC	ENSMUSG00000035506.17	novel	3166	13	NA	NA	-77	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	14.1923038159175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTATTGTTTTATTTTT	NA	False	NA	2	True	AATAAA	-12	NA	33338570	33483771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_63112_5	chr16	+	3041	15	FSM	ENSMUSG00000022817.16	ENSMUST00000069345.6	3056	15	5	10	5	-2	multi-exon	FALSE	canonical	2	19	junction_14	52.8724398714414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTGTAGATCTGATTA	NA	False	NA	12	True	AATAAA	-13	NA	33650051	33769513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768223_33769026
Isoform_63115_258	chr16	+	3074	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	16	192	4	1	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTAGATCTGATTACTG	NA	False	NA	15	True	AATAAA	-16	NA	33650050	33769516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
Isoform_63116_74	chr16	+	3115	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	-25	192	-25	1	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTAGATCTGATTACTG	NA	False	NA	15	True	AATAAA	-16	NA	33650009	33769516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
Isoform_63122_16	chr16	+	3269	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	13	0	1	0	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTTTGTGTTGGCTTTG	NA	False	NA	NA	False	AAAAAG	-17	NA	33650047	33769708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
Isoform_63124_6	chr16	+	3930	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	44	-692	32	692	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTTCTTGGTCACGAT	NA	False	NA	NA	False	NA	NA	NA	33650078	33770400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
Isoform_63127_6	chr16	+	3155	9	FSM	ENSMUSG00000022833.8	ENSMUST00000232489.2	3156	9	0	1	0	-1	multi-exon	FALSE	canonical	3	110	junction_6	18.5050668736971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTTGTTAGATATGT	NA	False	NA	NA	False	NA	NA	NA	34511079	34531785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893
Isoform_63129_231	chr16	+	4010	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	-21	10	1	-2	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATACGTGAATTTGTTTA	NA	False	NA	5	True	AATATA	-14	NA	34511080	34545562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
Isoform_63132_28	chr16	+	4151	13	FSM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	-46	2	-46	-2	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATACGTGAATTTGTTTA	NA	False	NA	5	True	AATATA	-14	NA	34510939	34545562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
Isoform_63138_9	chr16	+	3185	10	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	45.3352396113364	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATACGTGAATTTGTTTA	NA	False	NA	5	True	AATATA	-14	NA	34511080	34545562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
Isoform_63143_65	chr16	+	3588	7	FSM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	6	4	4	-4	multi-exon	FALSE	canonical	3	1242	junction_3	97.2996517065823	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTCTGATCTGGAGCC	NA	False	NA	NA	False	AATAAA	-16	NA	34842803	34929543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_34843006_34846194_34846313_34869089_34869109_34895975_34896065_34920125_34920248_34922315_34922495_34926684
Isoform_63144_698	chr16	+	992	7	FSM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	7	2599	5	-2599	multi-exon	FALSE	canonical	3	1242	junction_3	97.2996517065823	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTACATAAAGCATCC	NA	False	NA	70	True	NA	NA	NA	34842804	34926948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_34843006_34846194_34846313_34869089_34869109_34895975_34896065_34920125_34920248_34922315_34922495_34926684
Isoform_63148_11	chr16	+	973	6	NIC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	5	-2599	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	561.414428029776	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTACATAAAGCATCC	NA	False	NA	70	True	NA	NA	NA	34842804	34926948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_34843006_34846194_34846313_34895975_34896065_34920125_34920248_34922315_34922495_34926684
Isoform_63149_4	chr16	+	2204	11	ISM	ENSMUSG00000022840.10	ENSMUST00000114913.3	7008	21	125440	1345	9655	-1345	3prime_fragment	FALSE	canonical	1	2	junction_8	1.81383571472171	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTTTAGACTATGCTAGT	6915	False	NA	NA	False	AATAAA	-22	NA	35100686	35124763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_35100807_35103891_35103980_35109874_35109992_35110396_35110562_35111871_35112048_35113387_35113418_35114331_35114465_35118716_35118981_35119822_35120028_35122636_35122762_35123982
Isoform_63150_6	chr16	+	2528	3	ISM	ENSMUSG00000052133.17	ENSMUST00000133554.2	2928	6	144	18121	-73	-18121	5prime_fragment	FALSE	canonical	3	26	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAGTAAGTACTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	35361658	35450389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_35361973_35442946_35443151_35448379
Isoform_63151_19	chr16	+	4756	22	FSM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	-413	7	13	-7	multi-exon	FALSE	canonical	3	22	junction_14	8.19767125828774	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAACTGTCTTTGTGCA	NA	False	NA	19	True	ATTAAA	-19	NA	35361527	35484624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
Isoform_63152_35	chr16	+	4611	22	FSM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	-268	7	-59	-7	multi-exon	FALSE	canonical	3	22	junction_14	8.19767125828774	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAACTGTCTTTGTGCA	NA	False	NA	19	True	ATTAAA	-19	NA	35361672	35484624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
Isoform_63159_64	chr16	+	2645	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	14	-956	14	956	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGCTCAGTAGCCAAACT	5418	False	NA	35	True	AATAAA	-29	NA	35590758	35646874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
Isoform_63160_1022	chr16	+	1595	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	14	94	14	-94	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGTGTATATTTGCTTT	5418	False	NA	13	True	AATATA	-19	NA	35590758	35645824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
Isoform_63165_12	chr16	+	2947	7	NIC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	14	-97	intron_retention	TRUE	canonical	3	531	junction_3	37.5133309638054	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACGTGTATATTTGC	5418	False	NA	10	True	AATATA	-16	NA	35590758	35645821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35639133_35645058_35645170_35645252
Isoform_63171_20	chr16	+	3533	11	FSM	ENSMUSG00000022906.16	ENSMUST00000114878.8	3548	11	14	1	14	-1	multi-exon	FALSE	canonical	3	21	junction_5	7.49399759807808	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTGTGAATCGTGAAT	NA	False	NA	12	True	AATAAA	-18	NA	35758853	35792974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35759431_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
Isoform_63175_3	chr16	+	3121	11	NIC	ENSMUSG00000022906.16	novel	3548	11	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.6794691660195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGCTGTGAATCGTGA	NA	False	NA	10	True	AATAAA	-16	NA	35759409	35792972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_35759577_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
Isoform_63176_5	chr16	+	1558	4	ISM	ENSMUSG00000022906.16	ENSMUST00000023622.13	2973	10	24878	1	15605	-1	3prime_fragment	FALSE	canonical	3	23	junction_2	8.37987005998436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTGTGAATCGTGAAT	8465	False	NA	12	True	AATAAA	-18	NA	35784258	35792974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_35784735_35788019_35788157_35789960_35790136_35792204
Isoform_63180_526	chr16	+	5018	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	23	-2	13	2	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGGTTTTCCTTGGGTT	NA	False	NA	28	True	AATAAA	-41	NA	35803707	35857503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
Isoform_63189_24	chr16	+	5378	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	31	-370	-8	370	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAATGATATTCTATAT	NA	False	NA	NA	False	AATATA	-13	NA	35803715	35857871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
Isoform_63193_15	chr16	+	7023	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	6	-1990	-4	1990	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGAATGATTTTTTG	NA	False	NA	NA	False	AATACA	-29	NA	35803690	35859491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
Isoform_63203_480	chr16	+	669	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	395	9	0	0	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35892449	35912481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
Isoform_63205_80	chr16	+	1114	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	-49	8	-49	1	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTACATATTTATTTG	NA	False	NA	17	True	ATTAAA	-14	NA	35892005	35912482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
Isoform_63206_12	chr16	+	5414	4	NIC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	859	junction_1	29.9332590941915	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGGTGACTTT	NA	False	NA	25	True	ATTAAA	-22	NA	35892450	35912490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_35892508_35903060_35903187_35905386_35910331_35912203
Isoform_63207_10	chr16	+	546	4	FSM	ENSMUSG00000075229.12	ENSMUST00000163352.9	391	4	-6	-149	-6	2	multi-exon	FALSE	canonical	3	31	junction_1	405.618320866085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCTGTGTACATATTTA	NA	False	NA	13	True	ATTAAA	-10	NA	35892443	35912478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35892508_35905386_35905534_35910270_35910331_35912203
Isoform_6321_382	chr10	+	2319	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	122	1	0	1	multi-exon	FALSE	canonical	2	105	junction_7	32.1836157690049	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTCTGTGTCCTTTCTT	NA	False	NA	26	True	NA	NA	NA	59538420	59699953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
Isoform_63216_47	chr16	+	2509	8	FSM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	47	486	-8	-423	multi-exon	FALSE	canonical	3	17	junction_1	99.4786409235671	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTCTACTTCTATTCA	NA	False	NA	23	True	AATAAA	-19	NA	36514386	36546680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_6322_12	chr10	+	1508	8	FSM	ENSMUSG00000020109.14	ENSMUST00000142819.8	1495	8	-12	-1	-12	1	multi-exon	FALSE	canonical	3	241	junction_6	22.8937207325413	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTGGCTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	59715427	59732598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171
Isoform_63220_97	chr16	+	2283	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7268	-420	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	91.299263718584	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36528631	36546683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_63221_43	chr16	+	2330	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7321	-426	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	91.299263718584	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAGTTTCTACTTCTAT	NA	False	NA	20	True	AATAAA	-16	NA	36528578	36546677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_63222_22	chr16	+	2681	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7258	-12	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	91.299263718584	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACTGGCTAAATT	NA	False	NA	-6	True	ATTAAA	-6	NA	36528641	36547091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_63233_23	chr16	+	2708	7	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14193	12	-7307	-12	3prime_fragment	FALSE	canonical	0	0	junction_6	113.338235188111	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACTGGCTAAATT	NA	False	NA	-6	True	ATTAAA	-6	NA	36528592	36547091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
Isoform_63234_88	chr16	+	2225	7	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14268	420	-7232	-420	3prime_fragment	FALSE	canonical	0	0	junction_6	113.338235188111	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36528667	36546683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
Isoform_63237_499	chr16	+	2302	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14292	483	-7268	-420	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36528631	36546683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_63238_18	chr16	+	2477	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14115	485	-7445	-422	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCTACTTCTATTCAT	NA	False	NA	24	True	AATAAA	-20	NA	36528454	36546681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_63239_190	chr16	+	2354	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14239	484	-7321	-421	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACTTCTATTCATT	NA	False	NA	25	True	AATAAA	-21	NA	36528578	36546682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_63240_138	chr16	+	2710	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14292	75	-7268	-12	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACTGGCTAAATT	NA	False	NA	-6	True	ATTAAA	-6	NA	36528631	36547091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_63242_47	chr16	+	2777	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14239	61	-7321	2	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCCTGTGTTTGGCAG	NA	False	NA	8	True	ATTAAA	-20	NA	36528578	36547105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_6325_64	chr10	+	2934	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	101	6	31	0	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGGTGGGTCTGCA	NA	False	NA	31	True	NA	NA	NA	59715478	59735118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
Isoform_63251_53	chr16	+	2285	6	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	15367	483	-6193	-420	3prime_fragment	FALSE	canonical	3	275	junction_3	16.2061716639063	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36529706	36546683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_63255_62	chr16	+	1603	13	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	-6	-8	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	67.3747294366862	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTCAAGTCTG	NA	False	NA	7	True	NA	NA	NA	36648762	36679926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
Isoform_63257_65	chr16	+	2203	15	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	69.4050518657669	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGTCATGTTATTT	NA	False	NA	45	True	AATAAA	-12	NA	36648771	36693076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
Isoform_63258_12	chr16	+	2392	12	ISM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	15	13149	15	-8	5prime_fragment	FALSE	canonical	3	199	junction_1	25.9274257294988	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTCAAGTCTG	NA	False	NA	7	True	NA	NA	NA	36648784	36679926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816
Isoform_63259_98	chr16	+	1647	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTCAAGTCTG	NA	False	NA	7	True	NA	NA	NA	36648771	36679926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
Isoform_6326_48	chr10	+	1699	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	50	1292	-12	-4	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATTCAGGGATTCAAT	NA	False	NA	16	True	NA	NA	NA	59715427	59733832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
Isoform_63262_195	chr16	+	2268	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	-10	-1	-9	1	multi-exon	FALSE	canonical	3	136	junction_14	52.2779073016196	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGTCATGTTATTT	NA	False	NA	45	True	AATAAA	-12	NA	36648759	36693076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
Isoform_63273_5	chr16	+	11137	23	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	2	-9	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_2	26.4968421633239	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGAATTGTGTGAGAC	1452	False	NA	NA	False	AATAAA	-12	NA	36695504	36753438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_36695626_36705372_36705551_36706495_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
Isoform_63286_6	chr16	+	8653	31	FSM	ENSMUSG00000034206.16	ENSMUST00000182946.8	8628	31	-5	-20	-5	0	multi-exon	FALSE	canonical	2	7	junction_10	7.47655595103045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	3743	False	NA	2	True	AATAAA	-15	NA	36832142	36915779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
Isoform_63287_4	chr16	+	8550	30	FSM	ENSMUSG00000034206.16	ENSMUST00000054034.7	8552	30	0	2	0	-2	multi-exon	FALSE	canonical	2	7	junction_9	7.54534449468019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAATGTTTTTAATTT	3748	False	NA	0	True	AATAAA	-13	NA	36832147	36915777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_36832422_36833468_36833649_36835440_36835572_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
Isoform_63288_162	chr16	+	2012	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	17	2	2	1	multi-exon	FALSE	canonical	3	98	junction_4	11.0896163971859	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTGTCATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37360263	37392745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
Isoform_63290_8	chr16	+	1972	8	FSM	ENSMUSG00000022827.15	ENSMUST00000130028.2	1960	8	-11	-1	4	1	multi-exon	FALSE	canonical	3	12	junction_4	38.0767216904748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTGTCATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37360250	37392745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37384030_37384129_37387681_37387754_37390749_37390789_37391391
Isoform_63291_185	chr16	+	3587	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	185	17	3	-17	multi-exon	FALSE	canonical	3	116	junction_9	10.1607086367044	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAATAAAATA	5336	False	NA	NA	False	NA	NA	NA	37597419	37656859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
Isoform_63292_111	chr16	+	3587	12	NNC	ENSMUSG00000022816.12	novel	3789	11	NA	NA	-32	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	39.8333304517214	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAATAAAATAAAATAA	5301	False	NA	NA	False	NA	NA	NA	37597384	37656860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243_37656281_37656316
Isoform_6330_37	chr10	+	3005	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	27	9	8	-3	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGCAGTGGTGGGTCT	NA	False	NA	28	True	NA	NA	NA	59715404	59735115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
Isoform_63311_69	chr16	+	8621	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-18	1	-18	-1	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTCTTGGTCCGGTCA	NA	False	NA	21	True	AATAAA	-21	NA	37688732	37709219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
Isoform_63312_14	chr16	+	8645	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-43	2	-43	-2	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTCTTGGTCCGGTC	NA	False	NA	20	True	AATAAA	-20	NA	37688707	37709218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
Isoform_63315_4	chr16	+	2926	12	FSM	ENSMUSG00000022812.15	ENSMUST00000114750.2	1750	12	-802	-374	485	49	multi-exon	FALSE	canonical	1	2	junction_9	16.4818959031412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37909847	38061515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38037474_38037514_38040333_38040521_38049039_38049139_38060863
Isoform_63319_37	chr16	+	2885	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	487	4931	487	49	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37909849	38061515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_6332_32	chr10	+	3033	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	-20	-775	-12	0	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGGTGGGTCTGCA	NA	False	NA	31	True	NA	NA	NA	59715427	59735118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
Isoform_63321_71	chr16	+	2847	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	525	4931	525	49	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37909887	38061515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_63323_5	chr16	+	3086	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	284	4933	284	47	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAGACAAAG	NA	False	NA	NA	False	NA	NA	NA	37909646	38061513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_63324_5	chr16	+	3285	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	86	4932	86	48	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAGA	NA	False	NA	NA	False	NA	NA	NA	37909448	38061514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_63332_5	chr16	+	3317	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	55	4931	55	49	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37909417	38061515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_63333_5	chr16	+	2926	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	55	5322	55	-17	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGTTTCATTGTATTC	NA	False	NA	NA	False	TATAAA	-4	NA	37909417	38061124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_63335_24	chr16	+	473	4	NIC	ENSMUSG00000046516.11	novel	444	3	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	81	junction_3	1753.17641883398	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTGTTTCTTTTTCT	NA	False	NA	31	True	ATTAAA	-33	NA	38167381	38173128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_38167570_38169602_38169692_38170038_38170094_38172987
Isoform_63336_1244	chr16	+	418	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	8	18	3	0	multi-exon	FALSE	canonical	3	2901	junction_2	455	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATATGCTGAACCGT	NA	False	NA	10	True	ATTAAA	-12	NA	38167360	38173107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38167570_38169602_38169692_38172987
Isoform_63341_315	chr16	+	1836	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	2	-193	2	37	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCTCTGGAGTGAC	7072	False	NA	22	True	AGTAAA	-13	NA	38379061	38411745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_63342_25	chr16	+	2617	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	2	-974	2	2	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTATTTGTGAGCATTA	7072	False	NA	6	True	AATAAA	-17	NA	38379061	38412526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_63343_24	chr16	+	2019	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-180	-194	-180	38	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	6890	False	NA	23	True	AGTAAA	-14	NA	38378879	38411746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_63344_75	chr16	+	1863	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-24	-194	-24	38	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7046	False	NA	23	True	AGTAAA	-14	NA	38379035	38411746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_63345_146	chr16	+	1780	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-22	-113	-22	-3	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGTTATCTTTCATG	7048	False	NA	7	True	ATTAAA	-15	NA	38379037	38411665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_63347_30	chr16	+	1800	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-46	-109	-46	-7	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGATGATGTTATCTTT	7024	False	NA	3	True	ATTAAA	-11	NA	38379013	38411661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_63356_33	chr16	+	1641	9	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-6	38	combination_of_known_junctions	FALSE	canonical	1	87	junction_5	232.101136360855	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7064	False	NA	23	True	AGTAAA	-14	NA	38379053	38411746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_6336_16	chr10	+	3095	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	-83	-774	-13	-1	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCAGTGGTGGGTCTGC	NA	False	NA	30	True	NA	NA	NA	59715364	59735117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
Isoform_63365_42	chr16	+	2093	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	0	778	0	38	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383173	38411746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_63366_91	chr16	+	2051	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	42	778	-7	38	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383215	38411746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_63371_15	chr16	+	1854	9	FSM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	35	778	-14	38	multi-exon	FALSE	canonical	1	87	junction_5	275.38779475496	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383208	38411746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_63378_9	chr16	+	2037	7	FSM	ENSMUSG00000022793.18	ENSMUST00000154902.2	2009	7	-28	0	2	0	multi-exon	FALSE	canonical	2	4	junction_5	9.26312882106017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTGGTCTTGTTTTTT	3916	False	NA	7	True	AGTAAA	-17	NA	38562629	38589210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583492_38586276_38586382_38588259
Isoform_63379_27	chr16	+	2102	7	FSM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	2	200	0	1	multi-exon	TRUE	canonical	3	15	junction_1	6.0184900284226	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGTCTTGTTTTTTT	3914	False	NA	8	True	AGTAAA	-18	NA	38562627	38589211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
Isoform_6338_23	chr10	+	1990	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	8	1072	8	210	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTCCAGGCTTATG	NA	False	NA	5	True	TATAAA	-16	NA	59715404	59734046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
Isoform_63380_7	chr16	+	2162	7	FSM	ENSMUSG00000022793.18	ENSMUST00000114712.8	2168	7	7	-1	7	1	multi-exon	FALSE	canonical	3	9	junction_1	7.60847480700888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGTCTTGTTTTTTT	3921	False	NA	8	True	AGTAAA	-18	NA	38562634	38589211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_38562798_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
Isoform_63382_8	chr16	+	3056	17	NIC	ENSMUSG00000022701.19	novel	3779	17	NA	NA	10	-619	combination_of_known_junctions	FALSE	canonical	1	11	junction_1	25.4014640326104	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGCCTGGACTTA	NA	False	NA	14	True	AATAAA	-14	NA	43710271	43784058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_43710402_43712515_43712555_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
Isoform_63386_4	chr16	+	4340	8	FSM	ENSMUSG00000022701.19	ENSMUST00000122014.8	1822	8	5	-2523	5	-1460	multi-exon	FALSE	canonical	3	61	junction_7	9.64682458064808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCATGTCAGAGTTCACA	NA	False	NA	NA	False	AATAAA	-20	NA	43710266	43762453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276
Isoform_63387_4	chr16	+	3054	17	NIC	ENSMUSG00000022701.19	novel	3745	16	NA	NA	16	-618	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	27.1545777678461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCCTGCCTGGACTTAC	NA	False	NA	15	True	AATAAA	-15	NA	43710277	43784059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43762150_43762193_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
Isoform_63388_75	chr16	+	3017	16	FSM	ENSMUSG00000022701.19	ENSMUST00000178400.9	3745	16	109	619	10	-619	multi-exon	FALSE	canonical	1	27	junction_10	16.0949957716331	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGCCTGGACTTA	NA	False	NA	14	True	AATAAA	-14	NA	43710271	43784058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
Isoform_63394_1120	chr16	+	3615	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-15	887	8	5	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTGTAACTGTCATGA	NA	False	NA	24	True	AATAAA	-24	NA	43960200	43982842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_63402_80	chr16	+	4502	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-15	0	8	0	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAAGTATTTGTTTTTGT	NA	False	NA	4	True	ATTAAA	-16	NA	43960200	43983729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_63404_47	chr16	+	3671	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-75	891	-52	1	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTGTAACTGTC	NA	False	NA	20	True	AATAAA	-20	NA	43960140	43982838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_6342_50	chr10	+	3042	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	31	-3	-12	3	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGGTCTGCATTG	NA	False	NA	34	True	NA	NA	NA	59715427	59735121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
Isoform_63423_478	chr16	+	3608	5	FSM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	-48	-3	8	1	multi-exon	FALSE	canonical	3	375	junction_1	525.255652040033	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTGTAACTGTC	NA	False	NA	20	True	AATAAA	-20	NA	43960200	43982838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_63438_40	chr16	+	4499	5	FSM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	-48	-894	8	0	multi-exon	FALSE	canonical	3	375	junction_1	525.255652040033	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAAGTATTTGTTTTTGT	NA	False	NA	4	True	ATTAAA	-16	NA	43960200	43983729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_6345_264	chr10	+	1443	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	7	0	7	0	multi-exon	FALSE	canonical	3	221	junction_7	12.5797456254091	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838667	59935808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
Isoform_63452_263	chr16	+	3044	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	317	1266	24	88	multi-exon	FALSE	canonical	0	0	junction_1	35.5942143737688	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACGTGATACTTTTTT	6425	False	NA	12	True	AATAAA	-17	NA	44167800	44207594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
Isoform_63454_15	chr16	+	3271	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	15	88	intron_retention	FALSE	canonical	0	0	junction_1	36.6614046887186	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACGTGATACTTTTTT	6416	False	NA	12	True	AATAAA	-17	NA	44167791	44207594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
Isoform_63457_8	chr16	+	2995	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	27	90	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.2833029498811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGATACTTTTTTTT	6428	False	NA	14	True	AATAAA	-19	NA	44167803	44207596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_44167870_44175802_44175899_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
Isoform_63458_19	chr16	+	2911	16	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	15	90	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.8355505958204	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGATACTTTTTTTT	6416	False	NA	14	True	AATAAA	-19	NA	44167791	44207596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_44167870_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
Isoform_6346_16	chr10	+	1356	10	NIC	ENSMUSG00000044475.15	novel	1450	11	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	69.3265666213622	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGCTGTGGTCTGTGC	NA	False	NA	25	True	AATAAA	-15	NA	59838655	59935807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_59838730_59840616_59840750_59843548_59843649_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
Isoform_63464_66	chr16	+	2730	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	-19	155	-19	-155	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATTATCTAATCTTCA	NA	False	NA	32	True	ATTAAA	-40	NA	44544644	44557492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
Isoform_63468_3	chr16	+	2569	8	NIC	ENSMUSG00000036208.14	novel	2866	9	NA	NA	-15	-157	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	20.0316076769302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACCATTATCTAATCTT	NA	False	NA	30	True	ATTAAA	-38	NA	44544648	44557490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_44544832_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
Isoform_6347_18	chr10	+	1558	11	FSM	ENSMUSG00000044475.15	ENSMUST00000164083.4	1473	11	-87	2	-87	0	multi-exon	FALSE	canonical	3	28	junction_1	64.3808201252516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59839061	59935808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59839239_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
Isoform_63471_375	chr16	+	1470	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	-26	613	-26	31	multi-exon	FALSE	canonical	3	353	junction_3	33.1011472673263	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTTTTCATTTCCTGT	NA	False	NA	18	True	AATAAA	-13	NA	44979121	45008288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
Isoform_63475_7	chr16	+	1553	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	-110	614	-110	30	multi-exon	FALSE	canonical	3	353	junction_3	33.1011472673263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTTTTCATTTCCTG	NA	False	NA	17	True	AATAAA	-12	NA	44979037	45008287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
Isoform_63476_7	chr16	+	1348	11	NIC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	43	28	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	116.159201099181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGATGTTTTCATTTCC	NA	False	NA	15	True	AATAAA	-45	NA	44979190	45008285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_44979535_44982768_44982811_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
Isoform_63477_10	chr16	+	1387	11	NIC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	-26	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	116.159201099181	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTTATTTGTTTAATAA	NA	False	NA	13	True	AATAAA	-15	NA	44979121	45008255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_44979535_44982768_44982811_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
Isoform_63479_48	chr16	+	1302	6	FSM	ENSMUSG00000058550.16	ENSMUST00000050705.4	1271	6	-30	-1	22	1	multi-exon	FALSE	canonical	2	17	junction_3	211.400094607358	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	24	True	ACTAAA	-6	NA	48104119	48114601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_48104205_48108240_48108359_48109401_48109464_48111376_48111678_48113273_48113470_48114061
Isoform_63480_36	chr16	+	2185	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	181.921839138559	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGCTTGTGGCTTTT	NA	False	NA	16	True	NA	NA	NA	48104118	48114593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48110476_48111376_48111678_48113273_48113470_48114061
Isoform_63481_299	chr16	+	1457	7	FSM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	21	1	21	-1	multi-exon	FALSE	canonical	3	369	junction_4	76.5188792971309	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTGGCTTTTGTTTTT	NA	False	NA	22	True	ACTAAA	-4	NA	48104118	48114599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
Isoform_63486_8	chr16	+	3248	5	NIC	ENSMUSG00000058550.16	novel	1271	6	NA	NA	0	10	intron_retention	FALSE	canonical	3	460	junction_4	47.9713456138141	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTTATCTGAAT	NA	False	NA	33	True	ACTAAA	-15	NA	48104095	48114610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_48104205_48108240_48108359_48109401_48111678_48113273_48113470_48114061
Isoform_63487_13	chr16	+	1491	8	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	208.929145298357	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	24	True	ACTAAA	-6	NA	48104171	48114601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
Isoform_63488_11	chr16	+	1525	8	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	208.929145298357	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	24	True	ACTAAA	-6	NA	48104137	48114601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
Isoform_63491_15	chr16	+	2319	8	FSM	ENSMUSG00000072419.6	ENSMUST00000232448.2	2447	8	-36	164	-36	-164	multi-exon	FALSE	canonical	3	19	junction_1	195.358069989965	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTCTTGAGTATTT	NA	False	NA	64	True	NA	NA	NA	48124234	48139922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_48124570_48130639_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
Isoform_63494_106	chr16	+	1783	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	1	164	1	-164	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTCTTGAGTATTT	NA	False	NA	64	True	NA	NA	NA	48130840	48139922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
Isoform_63501_6	chr16	+	2521	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	-40	-533	-40	533	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGAGTGCCTTCAAACT	NA	False	NA	NA	False	NA	NA	NA	48130799	48140619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
Isoform_63508_16	chr16	+	2124	19	ISM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	61	43697	61	25563	5prime_fragment	FALSE	canonical	3	387	junction_7	38.3631124266753	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAGCATGTGGTAAAGG	NA	False	NA	NA	False	AATATA	-20	NA	48251660	48407566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255
Isoform_6351_15	chr10	+	4416	5	ISM	ENSMUSG00000058297.17	ENSMUST00000121820.9	5238	11	19919	0	19670	0	3prime_fragment	FALSE	canonical	2	6	junction_4	1.92028643696715	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAGAAACCTTTGCT	NA	False	NA	4	True	AATAAA	-17	NA	59961959	59971020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
Isoform_63513_471	chr16	+	2972	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	79	-6	79	6	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACATTTCCTTTTGATT	NA	False	NA	17	True	AATAAA	-22	NA	48251678	48451269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_63514_29	chr16	+	3065	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	-12	-8	-12	8	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	NA	False	NA	19	True	AATAAA	-24	NA	48251587	48451271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_63520_42	chr16	+	2888	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	338.451806909049	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	NA	False	NA	19	True	AATAAA	-24	NA	48251662	48451271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_63521_27	chr16	+	2920	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	31	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	338.451806909049	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	NA	False	NA	19	True	AATAAA	-24	NA	48251630	48451271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_63523_27	chr16	+	2954	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	356.504442609065	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	NA	False	NA	18	True	AATAAA	-23	NA	48251662	48451270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_63535_234	chr16	+	3518	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	1	455	1	-401	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTTTTGTTCTTTGCT	NA	False	NA	19	True	ATTAAA	-20	NA	48814551	48839613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
Isoform_63536_94	chr16	+	3933	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	42	-1	7	1	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTAGATCAGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	48814592	48840069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
Isoform_6354_2249	chr10	+	2590	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	60	-4	59	1	multi-exon	FALSE	canonical	3	864	junction_6	81.2601199887849	2249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	7049	False	NA	NA	False	AATAAA	-17	NA	60113508	60138377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
Isoform_63542_192	chr16	+	1596	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	-10	1015	-10	-5	multi-exon	FALSE	canonical	3	141	junction_7	10.0915806492343	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATCATGTTCAGAGAA	NA	False	NA	12	True	AATAAA	-8	NA	49519585	49584474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
Isoform_63544_3	chr16	+	1335	12	FSM	ENSMUSG00000055447.20	ENSMUST00000230641.2	1032	12	-100	-203	31	-2	multi-exon	FALSE	canonical	3	19	junction_2	27.2824225191312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATTGGAATCCCATTT	NA	False	NA	17	True	AATAAA	-21	NA	49676049	49731442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
Isoform_63545_3	chr16	+	1253	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229206.2	1316	11	68	-5	57	5	multi-exon	FALSE	canonical	3	21	junction_9	24.8766959220874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATCCCATTTTTCTATT	NA	False	NA	24	True	AATAAA	-28	NA	49676075	49731449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
Isoform_63547_16	chr16	+	1251	9	NIC	ENSMUSG00000055447.20	novel	1313	10	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	11.8532695911297	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTGGAATCCCATTTT	NA	False	NA	18	True	AATAAA	-22	NA	49676013	49731443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
Isoform_63549_11	chr16	+	1945	9	NIC	ENSMUSG00000055447.20	novel	5250	10	NA	NA	4	669	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	11.8532695911297	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	AAGAAA	-6	NA	49675999	49732123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
Isoform_63551_5	chr16	+	3864	20	NIC	ENSMUSG00000022637.12	novel	3864	19	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	15.1180030632521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGAGCTTCTCTTGTTA	NA	False	NA	NA	False	AATAAA	-31	NA	51851923	52025749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
Isoform_63552_14	chr16	+	6490	20	NIC	ENSMUSG00000022637.12	novel	3864	19	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	15.1180030632521	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTTTGTATGTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	51851956	52028408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
Isoform_63553_9	chr16	+	6382	19	FSM	ENSMUSG00000022637.12	ENSMUST00000227062.2	3728	19	3	-2657	3	-7	multi-exon	FALSE	canonical	3	23	junction_2	15.6067609597354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGCCTTTTGTATGT	NA	False	NA	NA	False	TATAAA	-10	NA	51851928	52028404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
Isoform_63556_4	chr16	+	3783	19	FSM	ENSMUSG00000022637.12	ENSMUST00000226593.2	3864	19	-46	127	-3	1	multi-exon	TRUE	canonical	3	31	junction_16	12.3923761908006	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGAGCTTCTCTTGTTA	NA	False	NA	NA	False	AATAAA	-31	NA	51851922	52025749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
Isoform_63559_12	chr16	+	6275	18	FSM	ENSMUSG00000022637.12	ENSMUST00000114471.3	6648	18	370	3	-11	-3	multi-exon	FALSE	canonical	3	25	junction_15	12.7088776425873	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTTTGTATGTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	51851957	52028408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
Isoform_63565_3389	chr16	+	559	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	118	0	-28	0	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	3389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786755	55791798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
Isoform_63566_1368	chr16	+	618	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	59	0	59	0	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786696	55791798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
Isoform_63574_244	chr16	+	4968	11	FSM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	-57	9	-57	-9	multi-exon	FALSE	canonical	3	98	junction_1	21.3485362495886	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAAAGCTTTGGCGTT	NA	False	NA	-3	True	AATAAA	-18	NA	55794188	55829267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
Isoform_63576_3	chr16	+	3103	9	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-61	-4278	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	41.9387574327137	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTATTTGCTTGTTTGA	NA	False	NA	NA	False	GATAAA	-27	NA	55794184	55824998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55824435
Isoform_63579_4	chr16	+	1055	7	FSM	ENSMUSG00000052917.16	ENSMUST00000049128.11	1130	7	-45	120	-5	-1	multi-exon	FALSE	canonical	3	14	junction_6	9.3407708461347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGCCTTGCTAGC	NA	False	NA	NA	False	ACTAAA	-16	NA	55895781	55946782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55946503
Isoform_63581_3	chr16	+	930	6	FSM	ENSMUSG00000052917.16	ENSMUST00000201011.2	914	6	-16	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	10.507140429251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGCCTTGCTAGCC	NA	False	NA	NA	False	ACTAAA	-17	NA	55895826	55946783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55946503
Isoform_63582_3	chr16	+	805	6	FSM	ENSMUSG00000052917.16	ENSMUST00000201011.2	914	6	11	98	11	-98	multi-exon	FALSE	canonical	3	14	junction_5	10.507140429251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAGATAACTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	55895853	55946685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55946503
Isoform_63589_1585	chr16	+	2272	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	19	3673	19	-2853	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-15	NA	56942084	56973395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
Isoform_63590_1355	chr16	+	3778	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	12	2174	12	-1354	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTCTATCCATTTTTG	NA	False	NA	28	True	AATAAA	-12	NA	56942077	56974894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
Isoform_63600_190	chr16	+	5952	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	12	0	12	0	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGATGGGATATTAG	NA	False	NA	13	True	AATAAA	-15	NA	56942077	56977068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
Isoform_63634_33	chr16	+	5889	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	47	-619	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_11	30.3420500296206	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTCCAGAAAATGCCAAAT	NA	False	NA	11	True	AATAAA	-16	NA	58228852	58289471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276515_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
Isoform_63635_4	chr16	+	6522	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	44	11	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_11	30.3420500296206	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAAGGTTTTACTTGCA	NA	False	NA	NA	False	AATAAA	-14	NA	58228849	58290101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276515_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
Isoform_63636_55	chr16	+	5899	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	45	617	45	-617	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAGAAAATGCCAAATTT	NA	False	NA	13	True	AATAAA	-18	NA	58228850	58289473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
Isoform_63637_74	chr16	+	5874	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	68	619	68	-619	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTCCAGAAAATGCCAAAT	NA	False	NA	11	True	AATAAA	-16	NA	58228873	58289471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
Isoform_63640_10	chr16	+	6532	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	45	-16	45	16	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTACTTGCATTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	58228850	58290106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
Isoform_63641_12	chr16	+	6510	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	68	-17	68	17	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTACTTGCATTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	58228873	58290107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
Isoform_63649_201	chr16	+	3053	7	FSM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	43	1	7	-1	multi-exon	FALSE	canonical	3	129	junction_2	26.4916129285394	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGTATTTGTTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	58490697	58500748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307_58498413_58499032
Isoform_63656_10	chr16	+	2090	6	FSM	ENSMUSG00000022744.13	ENSMUST00000162057.8	1540	6	82	-632	-16	-11	multi-exon	FALSE	canonical	3	12	junction_1	183.824916700648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTAAATTGTTTGAG	NA	False	NA	13	True	AATAAA	-20	NA	58548369	58554603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_58548448_58549535_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
Isoform_63657_15	chr16	+	2073	6	NIC	ENSMUSG00000022744.13	novel	1540	6	NA	NA	-10	-15	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	183.063486255452	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGTGTCTAAATTGTT	NA	False	NA	9	True	AATAAA	-16	NA	58548375	58554599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_58548448_58549542_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
Isoform_63658_121	chr16	+	2107	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	27	13	12	-13	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTCTAAATTGTTTG	NA	False	NA	11	True	AATAAA	-18	NA	58548299	58554601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
Isoform_63659_543	chr16	+	2039	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	97	11	-16	-11	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTAAATTGTTTGAG	NA	False	NA	13	True	AATAAA	-20	NA	58548369	58554603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
Isoform_63666_8	chr16	+	1617	7	ISM	ENSMUSG00000022724.16	ENSMUST00000120674.8	1753	9	-44	3708	3	-1858	5prime_fragment	FALSE	canonical	3	233	junction_3	29.8035232816525	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAGCATGAGGCTCCC	NA	False	NA	NA	False	AATAAA	-10	NA	59292140	59308323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790
Isoform_63668_188	chr16	+	1979	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	13	167	13	3	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATACATATCTTTGAGC	NA	False	NA	NA	False	AATAAA	-25	NA	59292150	59312657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
Isoform_63671_40	chr16	+	2869	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	28	-738	-1	738	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGACTCATCTTCCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	59292165	59313562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
Isoform_63672_72	chr16	+	2210	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	13	-64	13	64	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAGTATCCACTGTTA	NA	False	NA	20	True	AATAAA	-19	NA	59292150	59312888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
Isoform_63676_653	chr16	+	3277	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	21	5	21	-5	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGAGCAATTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	62674690	62749704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
Isoform_63677_36	chr16	+	3360	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	-62	5	-62	-5	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGAGCAATTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	62674607	62749704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
Isoform_63688_740	chr16	+	4397	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	15	13	15	-13	multi-exon	FALSE	canonical	3	981	junction_2	152	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTGAAATCATATT	NA	False	NA	8	True	AATAAA	-17	NA	64672373	64679857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_64672600_64673161_64673389_64675913
Isoform_63689_913	chr16	+	4282	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	15	128	15	-128	multi-exon	FALSE	canonical	3	981	junction_2	152	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCGTACTCCTGTGCT	NA	False	NA	32	True	ATTAAA	-14	NA	64672373	64679742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_64672600_64673161_64673389_64675913
Isoform_63705_310	chr16	+	4280	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	15	-127	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCGTACTCCTGTGCTT	NA	False	NA	33	True	ATTAAA	-15	NA	64672373	64679743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_64672600_64673161_64673389_64675916
Isoform_63708_242	chr16	+	4394	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	15	-13	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTGAAATCATATT	NA	False	NA	8	True	AATAAA	-17	NA	64672373	64679857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_64672600_64673161_64673389_64675916
Isoform_63726_49	chr16	+	2791	16	NNC	ENSMUSG00000022707.17	novel	2846	17	NA	NA	3	-3	intron_retention	FALSE	non_canonical	1	3	junction_14	9.28415615743055	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGACTAATGTGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	70111024	70366599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325900_70357912_70358030_70365876
Isoform_63727_7	chr16	+	3022	16	NNC	ENSMUSG00000022707.17	novel	2846	17	NA	NA	-45	-5	intron_retention	TRUE	non_canonical	1	3	junction_14	9.28415615743055	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCATTGACTAATGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	70110791	70366597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325900_70357912_70358030_70365876
Isoform_63728_10	chr16	+	2962	16	NNC	ENSMUSG00000022707.17	novel	2846	17	NA	NA	18	-2	intron_retention	FALSE	non_canonical	1	3	junction_14	9.28415615743055	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGACTAATGTGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	70110854	70366600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325900_70357912_70358030_70365876
Isoform_63730_13	chr16	+	7592	29	FSM	ENSMUSG00000022883.12	ENSMUST00000023600.8	7563	29	-27	-2	-27	2	multi-exon	FALSE	canonical	0	0	junction_6	15.2815414865151	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCCTTGTGTTGATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	72460009	72842985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756968_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
Isoform_63731_6	chr16	+	7396	29	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.4296874596358	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	72460038	72842983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756968_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
Isoform_63733_6	chr16	+	7376	28	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	4	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.9410780633455	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGATTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	72460040	72842992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756968_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72792004_72792048_72798806_72798962_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
Isoform_63737_33	chr16	+	2910	18	ISM	ENSMUSG00000022867.12	ENSMUST00000239066.2	4986	26	6	22849	6	3	5prime_fragment	TRUE	canonical	3	54	junction_8	11.7334879931088	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCAGACTACAGA	NA	False	NA	NA	False	AATAAA	-31	NA	76810599	76890819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490
Isoform_63738_61	chr16	+	4760	24	FSM	ENSMUSG00000022867.12	ENSMUST00000023580.8	4776	24	16	0	16	0	multi-exon	FALSE	canonical	3	45	junction_20	12.0225056756949	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGTCTATTGCTTC	NA	False	NA	NA	False	AGTAAA	-12	NA	76810609	76913668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
Isoform_63749_94	chr16	+	5514	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	223	5	-37	-5	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTTGCGGTGTGGCT	NA	False	NA	15	True	AATAAA	-16	NA	78098606	78137643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
Isoform_63752_10	chr16	+	1715	8	FSM	ENSMUSG00000022865.15	ENSMUST00000114229.4	1657	8	-55	-3	-55	3	multi-exon	FALSE	canonical	3	10	junction_7	23.9965983983955	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACATTTTAGATTA	NA	False	NA	NA	False	AATAAA	-18	NA	78098588	78156665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075_78133260_78156098
Isoform_63756_81	chr16	+	2104	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	-107	1	-107	-1	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTCTTCAGAATAAACA	NA	False	NA	NA	False	NA	NA	NA	84571166	84607883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
Isoform_63780_547	chr16	+	4213	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	156	1	-107	-1	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATTTATGGTCTATGAA	NA	False	NA	16	True	AATAAA	-19	NA	84571166	84622815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_63783_880	chr16	+	1314	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	155	2901	-108	-3	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAATGTCTGGTAAT	NA	False	NA	29	True	ACTAAA	-29	NA	84571165	84619915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_63787_213	chr16	+	4373	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	1	-4	1	4	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGTCTATGAATTATT	NA	False	NA	21	True	AATAAA	-24	NA	84571011	84622820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_63791_1290	chr16	+	1171	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	155	3044	-108	-2	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84571165	84619772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_63793_538	chr16	+	1327	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	-1	3044	-1	-2	multi-exon	TRUE	canonical	3	3263	junction_7	414.866630361679	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84571009	84619772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_63798_352	chr16	+	1469	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	1	2900	1	-2	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAAATGTCTGGTAATA	NA	False	NA	30	True	ACTAAA	-30	NA	84571011	84619916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_6380_35	chr10	+	811	4	FSM	ENSMUSG00000020098.8	ENSMUST00000020298.8	789	4	-21	-1	7	1	multi-exon	FALSE	canonical	3	60	junction_3	1.24721912892465	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTTCTAGAACCTTCT	NA	False	NA	7	True	AATAAA	-18	NA	60925116	60930104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_60925196_60927842_60927975_60928382_60928464_60929585
Isoform_6381_372	chr10	+	1784	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	311	0	311	0	multi-exon	FALSE	canonical	3	289	junction_2	2.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	20	True	ATTAAA	-17	NA	61254061	61261117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61254275_61258760_61259477_61260262
Isoform_6382_34	chr10	+	1810	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	284	1	284	-1	multi-exon	FALSE	canonical	3	289	junction_2	2.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTCTCACAATGTGT	NA	False	NA	19	True	ATTAAA	-16	NA	61254034	61261116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61254275_61258760_61259477_61260262
Isoform_63822_66	chr16	+	1163	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	7	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTGCAAAGTGATGAAGA	NA	False	NA	-3	True	ATTAAA	-24	NA	84571166	84619781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
Isoform_63862_530	chr16	+	4674	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-5	-2467	-5	3	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84631807	84660670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
Isoform_63871_352	chr16	+	4762	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	223	2	223	-2	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTTGGTTTTTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	84632234	84660665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
Isoform_6388_87	chr10	+	3195	5	FSM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	21	0	21	0	multi-exon	FALSE	canonical	3	23	junction_1	4.84767985741633	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGTGCTTGGTGTCT	1795	False	NA	3	True	AATAAA	-20	NA	61311600	61418570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826_61383995_61415908
Isoform_63881_23	chr16	+	5062	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	-75	0	-75	0	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84631936	84660667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
Isoform_6390_3	chr10	+	3068	4	NIC	ENSMUSG00000037151.9	novel	3216	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	12.9614813968157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGTGCTTGGTGTCT	1775	False	NA	3	True	AATAAA	-20	NA	61311580	61418570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_61311669_61362838_61362989_61383826_61383995_61415908
Isoform_63904_89	chr16	+	1846	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	40	-2	-2	2	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCCTTTGTGTAGCGT	NA	False	NA	3	True	AATAAA	-28	NA	87151112	87165632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
Isoform_63906_20	chr16	+	1704	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	-2	-2	-2	2	multi-exon	FALSE	canonical	3	22	junction_4	45.8768732587564	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCCTTTGTGTAGCGT	NA	False	NA	3	True	AATAAA	-28	NA	87151112	87165632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
Isoform_63908_4	chr16	+	470	4	NNC	ENSMUSG00000044442.12	novel	3473	4	NA	NA	2	-3754	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	53.2749680640188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACACAGTCCCTTCTTGG	NA	False	NA	NA	False	AAAACA	-23	NA	87151116	87158804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_87151275_87153065_87153153_87153785_87153877_87158670
Isoform_63910_7	chr16	+	1443	7	FSM	ENSMUSG00000025616.15	ENSMUST00000131206.8	1405	7	-37	-1	21	1	multi-exon	FALSE	canonical	3	153	junction_5	32.3045404445464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTCTCTACCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	87251893	87267913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241
Isoform_63916_131	chr16	+	2873	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	327	5	3	-5	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTTATTAGAGTT	NA	False	NA	5	True	AATAAA	-13	NA	87251917	87280400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
Isoform_63917_73	chr16	+	2919	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	280	6	-2	-6	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTTTATTAGAGT	NA	False	NA	4	True	AATAAA	-12	NA	87251870	87280399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
Isoform_63920_21	chr16	+	2872	18	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	55.1537642982143	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTTATTAGAGTT	NA	False	NA	5	True	AATAAA	-13	NA	87251915	87280400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
Isoform_63921_12	chr16	+	2712	18	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	55.1537642982143	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATGTTCACCTAAGT	NA	False	NA	NA	False	AATAAA	-12	NA	87251869	87280194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
Isoform_63924_87	chr16	+	3256	5	FSM	ENSMUSG00000025612.6	ENSMUST00000026703.6	5867	5	-33	2644	-33	-1899	multi-exon	FALSE	canonical	1	4	junction_3	14.497844667398	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGCCGTGTTG	NA	False	NA	NA	False	NA	NA	NA	87495799	87527590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289_87519497_87526324
Isoform_63929_389	chr16	+	644	5	FSM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_1	320.427351360648	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGACTCCTTTGACT	NA	False	NA	22	True	ATTAAA	-21	NA	90017641	90023220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032_90022151_90023037
Isoform_63930_13	chr16	+	502	5	NNC	ENSMUSG00000022982.11	novel	641	5	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	320.427351360648	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	False	NA	19	True	ATTAAA	-18	NA	90017738	90023217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_90017776_90019667_90019765_90021243_90021314_90022032_90022151_90023037
Isoform_63931_24	chr16	+	679	5	NNC	ENSMUSG00000022982.11	novel	641	5	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	320.427351360648	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	False	NA	19	True	ATTAAA	-18	NA	90017603	90023217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_90017814_90019663_90019765_90021243_90021314_90022032_90022151_90023037
Isoform_63937_130	chr16	+	5030	11	FSM	ENSMUSG00000053414.9	ENSMUST00000065856.8	5393	11	365	-2	365	2	multi-exon	FALSE	canonical	3	95	junction_1	15.4272486205415	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCTTTGTTTATTGA	NA	False	NA	11	True	AATATA	-45	NA	90183265	90296443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_90183605_90229401_90229695_90244197_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
Isoform_63938_66	chr16	+	5483	11	FSM	ENSMUSG00000053414.9	ENSMUST00000065856.8	5393	11	-90	0	-90	0	multi-exon	FALSE	canonical	3	95	junction_1	15.4272486205415	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGCTTTGTTTATT	NA	False	NA	9	True	AATATA	-43	NA	90182810	90296441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_90183605_90229401_90229695_90244197_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
Isoform_63945_3	chr16	+	4079	7	NNC	ENSMUSG00000053414.9	novel	5393	11	NA	NA	2273	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.3609030685699	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGGCTGCTGCTTTGTTT	NA	False	NA	6	True	AATATA	-40	NA	90261057	90296438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_90261157_90269331_90269444_90272776_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
Isoform_63946_3	chr16	+	1722	8	FSM	ENSMUSG00000039903.19	ENSMUST00000037539.15	2142	8	280	140	26	47	multi-exon	FALSE	canonical	2	6	junction_2	3.62530786869986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATTTACAATGCCAGGT	NA	False	NA	NA	False	NA	NA	NA	90628026	90701633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
Isoform_63947_9	chr16	+	1690	8	FSM	ENSMUSG00000039903.19	ENSMUST00000037539.15	2142	8	261	191	7	-1	multi-exon	FALSE	canonical	2	6	junction_2	3.62530786869986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTATCTGTACATTAATA	NA	False	NA	NA	False	AATAAA	-27	NA	90628007	90701582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
Isoform_63949_49	chr16	+	1140	7	FSM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	-39	-2	28	2	multi-exon	FALSE	canonical	3	47	junction_6	3.19722101554181	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTCTGTCTCTAATGT	NA	False	NA	10	True	AATAAA	-22	NA	91169698	91190930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
Isoform_6395_2261	chr10	+	1362	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	0	2	0	-2	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	2261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTTAGGATAGTTT	2052	False	NA	13	True	AATAAA	-14	NA	61484330	61509945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
Isoform_63952_3	chr16	+	3021	9	FSM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	20	6	20	-6	multi-exon	FALSE	canonical	1	3	junction_7	21.683807322516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGACTTTATAGTCTTTT	NA	False	NA	3	True	AATACA	-15	NA	91169690	91202471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91196105_91196234_91200597
Isoform_63953_3	chr16	+	2833	9	FSM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	-2	216	-2	7	multi-exon	FALSE	canonical	1	3	junction_7	21.683807322516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-28	NA	91169668	91202261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91196105_91196234_91200597
Isoform_63954_34	chr16	+	1795	7	FSM	ENSMUSG00000022969.14	ENSMUST00000023691.12	1850	7	44	11	-41	1	multi-exon	FALSE	canonical	3	23	junction_1	1.63299316185545	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATTTAGGGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	91203166	91222711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91203261_91204505_91204630_91208770_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
Isoform_63955_427	chr16	+	3902	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	4	3	4	1	multi-exon	FALSE	canonical	3	156	junction_4	11.4908659377786	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGGATATTTTCTTTAT	NA	False	NA	21	True	NA	NA	NA	91282129	91304326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
Isoform_63958_9	chr16	+	4068	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	-161	2	-161	2	multi-exon	FALSE	canonical	3	156	junction_4	11.4908659377786	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGATATTTTCTTTATT	NA	False	NA	22	True	NA	NA	NA	91281964	91304327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
Isoform_6396_2276	chr10	+	1294	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	68	2	-1	-2	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	2276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTTAGGATAGTTT	2120	False	NA	13	True	AATAAA	-14	NA	61484398	61509945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
Isoform_63960_29	chr16	+	3726	10	NIC	ENSMUSG00000022967.14	novel	3909	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	7	junction_2	50.8296598551245	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATATTTTCTTTATTTA	NA	False	NA	24	True	NA	NA	NA	91282129	91304329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_91282305_91286583_91286708_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
Isoform_63963_58	chr16	+	2098	7	FSM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	-12	1622	-12	-1168	multi-exon	FALSE	canonical	3	18	junction_6	4.14996653266291	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTGTATCTAAACT	NA	False	NA	NA	False	AATAAA	-12	NA	91343947	91360889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91344121_91351835_91351969_91354772_91354967_91356864_91357014_91357432_91357593_91358507_91358666_91359758
Isoform_63967_76	chr16	+	7955	5	FSM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-10	0	-9	0	multi-exon	FALSE	canonical	3	129	junction_4	147.892697588488	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGCCATTGTGTGTTT	NA	False	NA	4	True	NA	NA	NA	91444757	91460921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91459379
Isoform_63970_50	chr16	+	7514	7	FSM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	10	5	4	-5	multi-exon	FALSE	canonical	3	68	junction_6	146.545120090101	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACTTGTTGTGCAAAAT	NA	False	NA	3	True	AATAAA	-14	NA	91444776	91462591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91461807
Isoform_63974_98	chr16	+	8343	12	FSM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	370	18	-3	-3	multi-exon	FALSE	canonical	3	185	junction_11	92.9729366114073	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTTGTGTCTTATT	NA	False	NA	8	True	AATACA	-12	NA	91444763	91476077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
Isoform_63986_16	chr16	+	2348	16	FSM	ENSMUSG00000022957.21	ENSMUST00000095909.10	6103	16	-50	3805	-33	238	multi-exon	FALSE	canonical	3	154	junction_12	15.0928975202098	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGCCCAACGTGCTC	NA	False	NA	NA	False	TATAAA	-14	NA	91526207	91625436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
Isoform_63990_52	chr16	+	3471	21	ISM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-9	20195	-8	144	5prime_fragment	FALSE	canonical	3	117	junction_18	19.7557586541241	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGTCCTGGAGGCCCCA	NA	False	NA	NA	False	AATAAA	-34	NA	91526249	91648348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693
Isoform_63994_88	chr16	+	5399	29	FSM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-35	0	-17	0	multi-exon	FALSE	canonical	3	117	junction_18	26.3675937468704	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAACGTCTCTGTGTT	NA	False	NA	9	True	ATTAAA	-19	NA	91526223	91668543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
Isoform_63997_3	chr16	+	5261	29	NIC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	39.3317911608201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAACGTCTCTGTG	NA	False	NA	7	True	ATTAAA	-17	NA	91526356	91668541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599925_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
Isoform_63998_3	chr16	+	4613	30	NNC	ENSMUSG00000022957.21	novel	5393	30	NA	NA	16	75	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	48.0442225934977	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCTATTTTGGTTTT	NA	False	NA	16	True	AATAAA	-15	NA	91526184	91667460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_91526488_91576444_91576703_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
Isoform_64002_8	chr16	+	1328	7	FSM	ENSMUSG00000022957.21	ENSMUST00000232198.2	1167	7	-15	-146	-15	10	multi-exon	FALSE	canonical	2	3	junction_2	3.24893144826965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTGTGTAGGCCTCCT	NA	False	NA	NA	False	TATAAA	-32	NA	91700935	91709234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91701102_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
Isoform_64003_146	chr16	+	793	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	53	0	53	0	multi-exon	FALSE	canonical	3	238	junction_1	10.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	6338	False	NA	5	True	AATAAA	-17	NA	91855210	91909115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_91855369_91896481_91896622_91908620
Isoform_64004_107	chr16	+	507	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	9	1	-1	-1	multi-exon	FALSE	canonical	3	229	junction_1	48.3482735529983	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTCTGCATTCTCTC	NA	False	NA	25	True	AATAAA	-15	NA	92098182	92109928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
Isoform_64005_6	chr16	+	576	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	-60	1	-60	-1	multi-exon	FALSE	canonical	3	229	junction_1	48.3482735529983	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTCTGCATTCTCTC	NA	False	NA	25	True	AATAAA	-15	NA	92098113	92109928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
Isoform_64006_379	chr16	+	1041	3	FSM	ENSMUSG00000051483.10	ENSMUST00000039659.9	1237	3	9	187	9	-26	multi-exon	FALSE	canonical	3	426	junction_1	12.5	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAATTCTTTGAATGCA	NA	False	NA	-11	True	AATAAA	-1	NA	93404733	93407206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_93405143_93405676_93405785_93406682
Isoform_64011_228	chr16	+	1195	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	-24	-1	-24	1	multi-exon	FALSE	canonical	3	122	junction_2	11	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGGTTTTTGTTTGTT	NA	False	NA	21	True	ATTAAA	-23	NA	93480078	93487879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_93480502_93481934_93482043_93487215
Isoform_64012_7	chr16	+	1481	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	-314	3	-314	-3	multi-exon	FALSE	canonical	3	122	junction_2	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTATTTGGTTTTTGTT	NA	False	NA	17	True	ATTAAA	-19	NA	93479788	93487875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_93480502_93481934_93482043_93487215
Isoform_64016_20	chr16	+	7293	37	NIC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_4	15.285831210715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	NA	False	NA	20	True	AATAAA	-23	NA	93508820	93607476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
Isoform_64017_8	chr16	+	7290	37	FSM	ENSMUSG00000022946.11	ENSMUST00000045004.11	7319	37	29	0	-1	0	multi-exon	FALSE	canonical	3	19	junction_4	15.0894452523839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	NA	False	NA	20	True	AATAAA	-23	NA	93508820	93607476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595793_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
Isoform_64021_4	chr16	+	1216	8	NIC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	21.0267079919704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	5843	False	NA	20	True	AATAAA	-23	NA	93597015	93607476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_93597136_93598448_93598511_93600349_93600479_93603292_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
Isoform_64025_8	chr16	+	4038	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-12	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	202.236006546188	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	1076	False	NA	13	True	AATAAA	-24	NA	93629110	93672958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642234_93644164_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
Isoform_64028_416	chr16	+	4068	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	152.272050435233	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	1081	False	NA	15	True	AATAAA	-26	NA	93629115	93672960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642234_93644164_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
Isoform_64030_8	chr16	+	3721	14	ISM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	13051	-9	548	8	3prime_fragment	FALSE	non_canonical	1	193	junction_1	112.793102730923	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAAGTTATTTCCTTAC	NA	False	NA	24	True	AATAAA	-35	NA	93642059	93672969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
Isoform_64047_25	chr16	+	1938	14	FSM	ENSMUSG00000022945.13	ENSMUST00000117099.8	1894	14	-10	-34	-10	1	multi-exon	FALSE	canonical	3	16	junction_1	247.655157271309	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTGTGTGCTGACTT	4379	False	NA	17	True	AATAAA	-25	NA	93680801	93702999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_93680864_93681320_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
Isoform_64051_1700	chr16	+	1903	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	15	4	-8	1	multi-exon	FALSE	canonical	3	827	junction_1	52.2487224157954	1700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTGTGTGCTGACTT	4381	False	NA	17	True	AATAAA	-25	NA	93680803	93702999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
Isoform_64063_9	chr16	+	2800	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-483	1915	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	130.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2381	False	NA	16	True	NA	NA	NA	93811816	93815010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93812370_93812713_93814317_93814366
Isoform_64064_6	chr16	+	1274	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-474	1915	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_2	43.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2390	False	NA	16	True	NA	NA	NA	93811825	93815010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_93812370_93812713_93813006_93814572
Isoform_64067_22	chr16	+	1511	4	FSM	ENSMUSG00000022941.9	ENSMUST00000023660.9	1531	4	15	5	15	-5	multi-exon	FALSE	canonical	3	15	junction_3	1.63299316185545	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTTTGACAATCATC	NA	False	NA	2	True	AATAAA	-10	NA	94129293	94137789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_94129457_94130204_94130281_94134114_94134183_94136585
Isoform_64069_3	chr16	+	2094	11	FSM	ENSMUSG00000040785.20	ENSMUST00000119131.3	3781	11	-28	1715	3	-902	multi-exon	FALSE	canonical	3	23	junction_10	14.2197046382828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGATGTTGAAATATT	NA	False	NA	NA	False	ATTAAA	-24	NA	94171628	94196339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
Isoform_64070_3	chr16	+	4495	11	FSM	ENSMUSG00000040785.20	ENSMUST00000119131.3	3781	11	-26	-688	5	688	multi-exon	FALSE	canonical	3	23	junction_10	14.2197046382828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCACTGACATCTCTTGT	NA	False	NA	NA	False	GATAAA	-16	NA	94171630	94198742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
Isoform_64074_15	chr16	+	7266	46	FSM	ENSMUSG00000040785.20	ENSMUST00000117648.9	7415	46	151	-2	2	2	multi-exon	FALSE	canonical	0	0	junction_37	31.7357141963995	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171627	94270081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
Isoform_64076_4	chr16	+	7213	45	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_36	32.3533563857212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171636	94270080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94171721_94184770_94184926_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
Isoform_64078_5	chr16	+	6415	37	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_28	29.9596436379604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171621	94270080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94171721_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
Isoform_64080_6	chr16	+	6219	36	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	31.5407866815302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171654	94270080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94171721_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
Isoform_64082_11	chr16	+	6012	33	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	32.491690644494	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171627	94270080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94171721_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
Isoform_64084_5	chr16	+	7373	46	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_37	32.7846998340671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171627	94270078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94171831_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
Isoform_64087_3	chr16	+	6311	35	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	33.5901925874545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171627	94270081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94171831_94204172_94204228_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
Isoform_64092_28	chr16	+	3603	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-329	2485	-329	381	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTGTTTTGTTTTGTTTT	NA	False	NA	27	True	AATAAA	-37	NA	94370539	94493441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64093_22	chr16	+	5880	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-329	208	-329	-208	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTTACTATGCTT	NA	False	NA	14	True	GATAAA	-19	NA	94370539	94495718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64096_9	chr16	+	6083	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-326	2	-326	-2	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTTTTTAAAATGGA	NA	False	NA	18	True	AGTAAA	-20	NA	94370542	94495924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64100_4	chr16	+	6252	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-706	213	-706	-213	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCAGAGTCTTTACTA	NA	False	NA	9	True	GATAAA	-14	NA	94370162	94495713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64104_15	chr16	+	5843	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-326	-215	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCCTCAGAGTCTTTAC	NA	False	NA	7	True	GATAAA	-12	NA	94370542	94495711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64106_21	chr16	+	3558	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-325	367	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGGCCCCATAAGGGTG	NA	False	NA	13	True	AATAAA	-23	NA	94370543	94493427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64109_3	chr16	+	3924	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-683	375	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATAAGGGTGTTTTGTTT	NA	False	NA	21	True	AATAAA	-31	NA	94370185	94493435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_6411_24	chr10	+	2643	8	NIC	ENSMUSG00000020088.11	novel	897	8	NA	NA	-7	-7	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	573.138691054507	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAACTTGCCTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	61516101	61529069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_61516193_61517877_61517928_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
Isoform_64111_4	chr16	+	5960	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-233	-5	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATTTGGTTTTTAAAAT	NA	False	NA	15	True	AGTAAA	-17	NA	94370635	94495921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64113_3	chr16	+	6057	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-329	-4	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTGGTTTTTAAAATG	NA	False	NA	16	True	AGTAAA	-18	NA	94370539	94495922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64114_3	chr16	+	5710	11	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-246	-209	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	49.351393090773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAGTCTTTACTATGCT	NA	False	NA	13	True	GATAAA	-18	NA	94370622	94495717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94371394_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64116_4	chr16	+	3498	11	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-324	367	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	49.351393090773	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGGCCCCATAAGGGTG	NA	False	NA	13	True	AATAAA	-23	NA	94370544	94493427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_94371394_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
Isoform_64122_451	chr16	+	3539	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	348	3	-32	3	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCTTTGTAATGTTGG	NA	False	NA	18	True	AATAAA	-18	NA	95503289	95522092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
Isoform_64124_31	chr16	+	3562	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	325	3	-55	3	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCTTTGTAATGTTGG	NA	False	NA	18	True	AATAAA	-18	NA	95503266	95522092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
Isoform_64125_8	chr16	+	4025	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	-138	3	-138	3	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCTTTGTAATGTTGG	NA	False	NA	18	True	AATAAA	-18	NA	95502803	95522092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
Isoform_64133_702	chr16	+	2485	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	5	5	1	1	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTACTGTGGAAAGCGT	NA	False	NA	25	True	AATAAA	-19	NA	95946611	95959047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
Isoform_64134_32	chr16	+	2545	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-55	5	-55	1	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTACTGTGGAAAGCGT	NA	False	NA	25	True	AATAAA	-19	NA	95946551	95959047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
Isoform_64135_18	chr16	+	2680	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-7	-178	-7	178	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTCAGCTTTTTAA	NA	False	NA	NA	False	AGTAAA	-7	NA	95946599	95959230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
Isoform_6414_34	chr10	+	2726	8	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	576.708322981313	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516102	61529076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_61516193_61519839_61519967_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
Isoform_64140_27	chr16	+	2423	4	FSM	ENSMUSG00000023147.18	ENSMUST00000233566.2	2415	4	-15	7	-9	-7	multi-exon	FALSE	canonical	3	18	junction_2	163.242832069963	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGACTGGGTACTGTG	NA	False	NA	17	True	AATAAA	-11	NA	95946597	95959039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_95946779_95953012_95953179_95955280_95955396_95957078
Isoform_64143_4	chr16	+	2374	14	FSM	ENSMUSG00000023341.16	ENSMUST00000188251.7	2421	14	0	47	0	-46	multi-exon	FALSE	canonical	0	0	junction_2	1.87477809337753	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGGGAGCTGCCTGTTG	NA	False	NA	NA	False	AATAAA	-12	NA	97337280	97362053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_97337374_97339817_97339930_97345667_97345861_97346811_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97357160_97357320_97357801_97357879_97359719_97359969_97361538
Isoform_64144_7	chr16	+	1319	6	FSM	ENSMUSG00000080717.11	ENSMUST00000232308.2	669	6	-9	-641	1	0	multi-exon	FALSE	canonical	2	6	junction_4	50.8409283943557	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	14	True	NA	NA	NA	97798524	97817956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318_97811369_97816865_97816920_97817041
Isoform_64145_9	chr16	+	1268	5	FSM	ENSMUSG00000080717.11	ENSMUST00000231913.2	1230	5	-38	0	-1	0	multi-exon	FALSE	canonical	3	30	junction_4	45.9292934846597	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	14	True	NA	NA	NA	97798525	97817956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97817041
Isoform_64146_4	chr16	+	541	5	FSM	ENSMUSG00000080717.11	ENSMUST00000232387.2	546	5	4	1	-3	-1	multi-exon	FALSE	canonical	3	19	junction_4	48.9508682251909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTGTCTTAGCTACA	NA	False	NA	NA	False	NA	NA	NA	97798530	97832635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97832442
Isoform_64148_3	chr16	+	177	1	Intergenic	novelGene_4257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAACTTCAGTAC	NA	False	NA	NA	False	NA	NA	NA	3110756	3110933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_3110800_3110900
Isoform_64149_14	chr16	+	223	1	Intergenic	novelGene_4407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATCCGTGGATTCAAG	3452	False	NA	NA	False	NA	NA	NA	21530916	21531139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21530900_21531100
Isoform_64150_78	chr16	+	179	1	Intergenic	novelGene_4408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAACCCAAATCGTTT	5210	False	NA	NA	False	NA	NA	NA	21532674	21532853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21532700_21532900
Isoform_64151_9	chr16	+	174	1	Intergenic	novelGene_4409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCAAAGCCTGAA	5577	False	NA	NA	False	NA	NA	NA	21533041	21533215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21533000_21533200
Isoform_64152_27	chr16	+	192	1	Intergenic	novelGene_4410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTAGCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	21604318	21604510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21604300_21604500
Isoform_64153_3	chr16	+	177	1	Intergenic	novelGene_4411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAGCAAATAAG	NA	False	NA	NA	False	NA	NA	NA	21608943	21609120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21608900_21609100
Isoform_64156_9	chr16	-	177	1	Intergenic	novelGene_4412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATATTGCAATTCTT	NA	False	NA	NA	False	NA	NA	NA	21806020	21805843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_21805800_21806000
Isoform_64157_17	chr16	-	228	1	Intergenic	novelGene_4413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAAAAAAAGGGTACTTT	NA	False	NA	NA	False	AAGAAA	-14	NA	21811055	21810827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_21810800_21811100
Isoform_64159_13	chr16	+	1604	2	NNC	ENSMUSG00000022855.10	novel	2135	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	3	132	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAG	2230	False	NA	NA	False	NA	NA	NA	21828261	21829886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr16_+_21828286_21828306
Isoform_64163_4	chr16	-	173	1	Intergenic	novelGene_4271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9993	False	NA	NA	False	NA	NA	NA	4513072	4512899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_4512900_4513100
Isoform_64164_3	chr16	+	177	1	Intergenic	novelGene_4414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAAAGAAAGAGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	21887434	21887611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21887400_21887600
Isoform_64165_8	chr16	+	175	1	Intergenic	novelGene_4415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGTCATAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	21925168	21925343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21925200_21925300
Isoform_64168_8	chr16	+	295	1	Intergenic	novelGene_4416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTAAAGAAGGGACAGGG	1922	False	NA	NA	False	NA	NA	NA	21932979	21933274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21933000_21933300
Isoform_6417_1139	chr10	+	2591	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	14	8	-6	-8	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61516102	61529068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
Isoform_64170_28	chr16	-	168	1	Intergenic	novelGene_4417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCTTACTC	NA	False	NA	NA	False	NA	NA	NA	22006206	22006038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_22006000_22006200
Isoform_64171_29	chr16	+	211	1	Intergenic	novelGene_4418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGCAAGAGAGAGTTTG	NA	False	NA	NA	False	AAAAAG	-16	NA	22035793	22036004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_22035800_22036000
Isoform_64181_4	chr16	+	9148	1	Antisense	novelGene_ENSMUSG00000022858.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22070682	22079830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_22070700_22079800
Isoform_64184_36	chr16	+	793	1	Intergenic	novelGene_4419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACGGTCG	NA	False	NA	NA	False	NA	NA	NA	22083492	22084285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_22083500_22084300
Isoform_64185_13	chr16	-	231	1	Antisense	novelGene_ENSMUSG00000086944.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGACCCAGGTTCAGG	1456	False	NA	NA	False	NA	NA	NA	4547965	4547734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_4547700_4548000
Isoform_64188_4	chr16	-	174	1	Intergenic	novelGene_4420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTACATTTCTG	NA	False	NA	NA	False	NA	NA	NA	22090981	22090807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_22090800_22091000
Isoform_64189_110	chr16	-	174	1	Intergenic	novelGene_4421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACATCCAAAGTC	8273	False	NA	NA	False	NA	NA	NA	22113044	22112870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_22112900_22113000
Isoform_64190_6	chr16	+	170	1	Intergenic	novelGene_4422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTAAAAAAAAATGATAGT	NA	False	NA	NA	False	NA	NA	NA	22113107	22113277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_22113100_22113300
Isoform_64191_3	chr16	+	495	1	FSM	ENSMUSG00000082241.5	ENSMUST00000120931.2	205	1	-43	-247	-43	247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCATCCAGGAGAGGTCT	NA	False	NA	NA	False	AATAAA	-31	NA	22113733	22114228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_22113700_22114200
Isoform_64193_4	chr16	+	175	1	Intergenic	novelGene_4423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	22181504	22181679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_22181500_22181700
Isoform_64194_43	chr16	+	177	1	Intergenic	novelGene_4424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATTTTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22189330	22189507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_22189300_22189500
Isoform_64217_29	chr16	-	158	1	Intergenic	novelGene_4272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	4570617	4570459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_4570500_4570600
Isoform_64222_8	chr16	-	177	1	Intergenic	novelGene_4425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAAACTGAAGCC	8702	False	NA	NA	False	NA	NA	NA	22890735	22890558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_22890600_22890700
Isoform_64223_21	chr16	+	177	1	Intergenic	novelGene_4426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGGGAAATTT	17	True	NA	NA	False	NA	NA	NA	22892816	22892993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_22892800_22893000
Isoform_64225_4	chr16	+	177	1	Intergenic	novelGene_4427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGCAAAACA	NA	False	NA	NA	False	NA	NA	NA	22915069	22915246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_22915100_22915200
Isoform_64249_9	chr16	+	172	1	Intergenic	novelGene_4428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGAGCAAGCAGGGAC	856	False	NA	NA	False	NA	NA	NA	22952005	22952177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_22952000_22952200
Isoform_64250_14	chr16	+	170	1	Intergenic	novelGene_4429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTTTTAAAGCAGTT	136	False	NA	NA	False	NA	NA	NA	22959346	22959516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_22959300_22959500
Isoform_64251_6	chr16	+	190	1	Antisense	novelGene_ENSMUSG00000004071.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTCAGTCAAAGGAAACAA	NA	False	NA	NA	False	NA	NA	NA	4588848	4589038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_4588800_4589000
Isoform_64254_12	chr16	+	161	1	Intergenic	novelGene_4431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAATTGAAAAAT	1839	False	NA	NA	False	NA	NA	NA	23159180	23159341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_23159200_23159300
Isoform_64255_50	chr16	-	188	1	Intergenic	novelGene_4432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	23439215	23439027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_23439000_23439200
Isoform_64256_12	chr16	-	2618	1	FSM	ENSMUSG00000004071.14	ENSMUST00000229452.2	4453	1	2	1833	2	-1833	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	4607797	4605179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_4605200_4607800
Isoform_64258_1091	chr16	+	1221	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	-75	-177	-75	177	mono-exon	FALSE	NA	NA	NA	NA	NA	1091	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTCATTTCAAAGTTT	NA	False	NA	NA	False	AATAAA	-26	NA	24348068	24349289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_24348100_24349300
Isoform_64261_5	chr19	+	324	1	Intergenic	novelGene_5805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGCAGAGGGCAAGATGA	NA	False	NA	NA	False	NA	NA	NA	41513702	41514026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_41513700_41514000
Isoform_64276_75	chr16	+	185	1	Intergenic	novelGene_4433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	24650622	24650807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_24650600_24650800
Isoform_6428_743	chr10	+	2232	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	48	6	48	-6	multi-exon	FALSE	canonical	3	269	junction_1	6.12825877028341	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTGTCTGTTGGCT	NA	False	NA	15	True	AATAAA	-18	NA	61531340	61538546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
Isoform_64280_8	chr16	+	210	1	Intergenic	novelGene_4434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTTGTTATTTTATCT	NA	False	NA	NA	False	NA	NA	NA	26593643	26593853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_26593600_26593900
Isoform_64285_3	chr16	+	171	1	Intergenic	novelGene_4435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAAATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	28686524	28686695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_28686500_28686700
Isoform_64286_5	chr16	+	1886	1	Intergenic	novelGene_4436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	28740314	28742200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_28740300_28742200
Isoform_64287_20	chr16	-	174	1	Intergenic	novelGene_4437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAAAATCCTAC	NA	False	NA	NA	False	NA	NA	NA	28776284	28776110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_28776100_28776300
Isoform_6429_86	chr10	+	2271	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	12	3	12	-3	multi-exon	FALSE	canonical	3	269	junction_1	6.12825877028341	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGTCTGTTGGCTGCT	NA	False	NA	18	True	AATAAA	-21	NA	61531304	61538549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
Isoform_64290_39	chr16	-	178	1	Intergenic	novelGene_4438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAGAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	29514896	29514718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_29514700_29514900
Isoform_64292_55	chr16	-	163	1	Intergenic	novelGene_4440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTATAATGAAG	NA	False	NA	NA	False	NA	NA	NA	29563331	29563168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_29563200_29563300
Isoform_64293_428	chr9	-	178	1	Intergenic	novelGene_11292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56649937	56649759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_56649800_56649900
Isoform_64294_14	chr16	+	187	1	Intergenic	novelGene_4442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATAATTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	29720281	29720468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_29720300_29720500
Isoform_64296_15	chr16	+	1446	1	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	9439	False	NA	NA	False	NA	NA	NA	4693671	4695117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_4693700_4695100
Isoform_64297_31	chr16	-	2147	1	FSM	ENSMUSG00000097313.3	ENSMUST00000232356.2	2375	1	231	-3	-6	3	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGGTCA	NA	False	NA	NA	False	NA	NA	NA	29765341	29763194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_29763200_29765300
Isoform_64298_4	chr16	-	2332	1	FSM	ENSMUSG00000097313.3	ENSMUST00000232356.2	2375	1	41	2	41	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29765531	29763199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_29763200_29765500
Isoform_64301_4	chr16	+	309	1	Intergenic	novelGene_4443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29768234	29768543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_29768200_29768500
Isoform_64303_56	chr16	+	186	1	Intergenic	novelGene_4444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCCAGATAGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	29800761	29800947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_29800800_29800900
Isoform_64304_5	chr16	+	440	1	Intergenic	novelGene_4258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTATGGTGAAAAAAAAAAAA	7903	False	NA	9	True	AGTAAA	-9	NA	3550114	3550554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_3550100_3550600
Isoform_64305_5	chr16	+	379	1	Intergenic	novelGene_4259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTATGGTGAAAAAAAAAAAA	7964	False	NA	9	True	AGTAAA	-9	NA	3550175	3550554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_3550200_3550600
Isoform_64310_3	chr16	-	178	1	Intergenic	novelGene_4445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGCGGGGGGTGGGGTG	8618	False	NA	NA	False	NA	NA	NA	29937897	29937719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_29937700_29937900
Isoform_64311_45	chr16	-	174	1	Intergenic	novelGene_4446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGGAAGTATCAAC	NA	False	NA	NA	False	NA	NA	NA	29971412	29971238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_29971200_29971400
Isoform_64312_23	chr16	+	181	1	Intergenic	novelGene_4447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAGAAGACAAAGAG	3334	False	NA	3	True	NA	NA	NA	30059051	30059232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_30059100_30059200
Isoform_64313_4	chr16	+	190	1	Intergenic	novelGene_4448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAGAGAGAACG	NA	False	NA	NA	False	NA	NA	NA	30083308	30083498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_30083300_30083500
Isoform_64314_6	chr16	-	322	2	Antisense	novelGene_ENSMUSG00000022517.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	46	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	7767	False	NA	NA	False	NA	NA	NA	4711389	4711044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_4711123_4711145
Isoform_6432_12	chr10	+	2190	4	FSM	ENSMUSG00000020087.6	ENSMUST00000218280.2	512	4	-1147	-531	49	-6	multi-exon	FALSE	canonical	0	0	junction_2	128.489515352637	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTGTCTGTTGGCT	NA	False	NA	15	True	AATAAA	-18	NA	61531341	61538546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61532522_61534076_61534208_61535262_61535408_61537812
Isoform_64331_46	chr16	-	198	1	Intergenic	novelGene_4449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	30201132	30200934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_30200900_30201100
Isoform_64333_3	chr16	+	210	1	Intergenic	novelGene_4450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACGTGTGTGAGTATA	NA	False	NA	NA	False	NA	NA	NA	30210291	30210501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_30210300_30210500
Isoform_64335_8	chr16	-	175	1	Intergenic	novelGene_4451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	30241246	30241071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_30241100_30241200
Isoform_64336_6	chr16	-	200	1	Intergenic	novelGene_4452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAATCAGAACAAAGGA	4302	False	NA	NA	False	NA	NA	NA	30263246	30263046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_30263000_30263200
Isoform_64337_8	chr16	-	170	1	Intergenic	novelGene_4453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAATGAAGGTGTT	1754	False	NA	NA	False	NA	NA	NA	30265794	30265624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_30265600_30265800
Isoform_64338_10	chr16	+	176	1	Intergenic	novelGene_4454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAAATAAAATAG	NA	False	NA	NA	False	NA	NA	NA	30285160	30285336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_30285200_30285300
Isoform_6434_53	chr10	+	3791	3	NIC	ENSMUSG00000020087.6	novel	2286	4	NA	NA	48	-2	intron_retention	FALSE	canonical	3	276	junction_2	4	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTGTTGGCTGCTT	NA	False	NA	19	True	AATAAA	-22	NA	61531340	61538550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_61534208_61535221_61535408_61537812
Isoform_64343_475	chr16	+	3003	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	3	69	3	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCAGTTCTGTTG	NA	False	NA	23	True	TATAAA	-24	NA	30418543	30421546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_30418500_30421500
Isoform_64344_33	chr16	+	3070	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	3	2	3	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGAGAGCCTCTGGAAATG	NA	False	NA	90	True	AATAAA	-21	NA	30418543	30421613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_30418500_30421600
Isoform_6435_28	chr10	+	653	5	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-6	10337	6	389	5prime_fragment	FALSE	canonical	3	116	junction_1	28.6050694807756	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTTGTTTGATTGTT	NA	False	NA	NA	False	AAAAAG	-13	NA	61551095	61564089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907
Isoform_64351_137	chr16	-	180	1	ISM	ENSMUSG00000116951.2	ENSMUST00000231571.2	805	3	1501	0	868	0	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTCTT	5912	False	NA	NA	False	NA	NA	NA	30688041	30687861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_30687900_30688000
Isoform_64352_57	chr16	+	199	1	Intergenic	novelGene_4455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCACCTCACTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	30704689	30704888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_30704700_30704900
Isoform_64353_3	chr16	-	322	1	Intergenic	novelGene_4456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATTTATAAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	30772776	30772454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_30772500_30772800
Isoform_6436_84	chr10	+	3094	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-4	-4	-4	-2	multi-exon	FALSE	canonical	3	116	junction_1	25.5706741209535	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGCTGGAGCTTTTATT	NA	False	NA	6	True	AATAAA	-17	NA	61551097	61574430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
Isoform_64364_4	chr16	+	2624	1	Antisense	novelGene_ENSMUSG00000049076.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-30	NA	30958644	30961268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_30958600_30961300
Isoform_64365_10	chr16	+	173	1	Intergenic	novelGene_4457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	31024836	31025009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_31024800_31025000
Isoform_64366_66	chr11	+	196	1	Intergenic	novelGene_1710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	72189215	72189411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_72189200_72189400
Isoform_64370_66	chr16	-	173	1	Intergenic	novelGene_4459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAAAAAAGTCCCCCT	NA	False	NA	NA	False	NA	NA	NA	31262208	31262035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_31262000_31262200
Isoform_64374_4	chr16	-	179	1	Intergenic	novelGene_4460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAGAGAGACAGAC	8512	False	NA	NA	False	NA	NA	NA	31306083	31305904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_31305900_31306100
Isoform_64376_13	chr16	-	174	1	Intergenic	novelGene_4461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAACCTTAAC	NA	False	NA	NA	False	NA	NA	NA	31391118	31390944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_31390900_31391100
Isoform_64378_13	chr16	+	177	1	Intergenic	novelGene_4462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAAAAAATTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	31501589	31501766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_31501600_31501800
Isoform_64379_5	chr16	-	173	1	Intergenic	novelGene_4463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31518815	31518642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_31518600_31518800
Isoform_64384_9	chr16	-	169	1	Intergenic	novelGene_4464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAATTCAATTC	NA	False	NA	NA	False	NA	NA	NA	31762711	31762542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_31762500_31762700
Isoform_64385_23	chr16	-	1455	1	FSM	ENSMUSG00000107002.2	ENSMUST00000202722.2	1445	1	-10	0	-10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	31767322	31765867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31765900_31767300
Isoform_64386_564	chr16	-	735	1	FSM	ENSMUSG00000107002.2	ENSMUST00000202722.2	1445	1	-11	721	-11	-721	mono-exon	FALSE	NA	NA	NA	NA	NA	564	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGTCTGAATGTGGTA	NA	False	NA	-9	True	ATTAAA	-13	NA	31767323	31766588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_31766600_31767300
Isoform_6439_69	chr10	+	1452	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	58	2	-2	-2	multi-exon	FALSE	canonical	3	49	junction_9	38.6497408676411	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGCTGGAGCTTTTATT	NA	False	NA	6	True	AATAAA	-17	NA	61551099	61574430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
Isoform_64391_22	chr16	-	192	1	Intergenic	novelGene_4273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTCTACGTCAGT	NA	False	NA	NA	False	NA	NA	NA	4818970	4818778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_4818800_4819000
Isoform_64394_3	chr16	+	216	1	Intergenic	novelGene_4465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATTTTAAAAC	NA	False	NA	NA	False	NA	NA	NA	31797251	31797467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_31797300_31797500
Isoform_6440_10	chr10	+	1866	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	10	-434	-2	434	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCTCTCACTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	61551099	61575473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
Isoform_64400_426	chrX	+	178	1	Intergenic	novelGene_12119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTACTG	NA	False	NA	NA	False	NA	NA	NA	102315393	102315571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_102315400_102315600
Isoform_64403_6	chr16	+	899	1	Antisense	novelGene_ENSMUSG00000022781.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTCAATTCATACAATT	NA	False	NA	NA	False	AATACA	-32	NA	31835763	31836662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_31835800_31836700
Isoform_64407_55	chr16	-	179	1	Intergenic	novelGene_4467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31881058	31880879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_31880900_31881100
Isoform_64408_14	chr16	+	1435	1	Intergenic	novelGene_4468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31895466	31896901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_31895500_31896900
Isoform_6441_35	chr10	+	1430	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	13	-1	1	1	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGATCCTCCTCCTTCGC	NA	False	NA	NA	False	AATAAA	-22	NA	61551102	61575040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
Isoform_64410_5	chr16	-	286	1	Intergenic	novelGene_4469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGTAAAAATACGTCA	NA	False	NA	NA	False	AATGAA	-15	NA	31910344	31910058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_31910100_31910300
Isoform_64412_7	chr16	+	160	1	Intergenic	novelGene_4470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	31923111	31923271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_31923100_31923300
Isoform_6442_5	chr10	+	2179	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	1	-738	1	738	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTTGTTTTTT	NA	False	NA	NA	False	AAAAAG	-11	NA	61551090	61575777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
Isoform_64422_107	chr16	+	179	1	Intergenic	novelGene_4471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATAGTTTTATGTCT	1971	False	NA	-9	True	NA	NA	NA	31950603	31950782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_31950600_31950800
Isoform_64423_7	chr16	-	181	1	Intergenic	novelGene_4472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAGGAGCCATTCC	NA	False	NA	NA	False	NA	NA	NA	31960500	31960319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_31960300_31960500
Isoform_64424_13	chr16	+	5026	1	Intergenic	novelGene_4473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	31967074	31972100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_31967100_31972100
Isoform_64428_73	chr16	+	3474	1	Antisense	novelGene_ENSMUSG00000035764.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32055415	32058889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_32055400_32058900
Isoform_64429_4	chr16	+	3920	1	NIC	ENSMUSG00000022787.11	novel	832	3	NA	NA	-6	-994	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32066064	32069984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_32066100_32070000
Isoform_6443_6	chr10	+	4139	8	NIC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	116	junction_1	25.8330590286073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	8	True	AATAAA	-19	NA	61551082	61574432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61571438_61572361
Isoform_64430_19	chr16	-	170	1	Intergenic	novelGene_4474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCCAAAACAACAAC	6645	False	NA	NA	False	NA	NA	NA	32072674	32072504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_32072500_32072700
Isoform_64431_24	chr16	-	176	1	Intergenic	novelGene_4475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAAGGAT	564	False	NA	NA	False	NA	NA	NA	32078755	32078579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_32078600_32078800
Isoform_64434_17	chr16	-	191	1	Intergenic	novelGene_4476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCAGCTGGGCAGTGGT	7779	False	NA	NA	False	NA	NA	NA	32137909	32137718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_32137700_32137900
Isoform_64435_23	chr16	+	199	1	Intergenic	novelGene_4477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTAAAAGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	32140293	32140492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32140300_32140500
Isoform_64438_5	chr16	-	160	1	Intergenic	novelGene_4478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATAAATAAATAAATCT	3474	False	NA	NA	False	NA	NA	NA	32144538	32144378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_32144400_32144500
Isoform_64440_12	chr16	+	377	1	Intergenic	novelGene_4479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACTCTCTGTGTGTGTA	3167	False	NA	NA	False	NA	NA	NA	32145989	32146366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32146000_32146400
Isoform_64441_8	chr16	+	174	1	Intergenic	novelGene_4274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4860880	4861054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_4860900_4861100
Isoform_64442_5	chr16	-	176	1	Intergenic	novelGene_4480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	2407	False	NA	NA	False	NA	NA	NA	32177274	32177098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_32177100_32177300
Isoform_64443_23	chr16	+	176	1	Intergenic	novelGene_4481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATTATTATGGA	NA	False	NA	NA	False	NA	NA	NA	32197793	32197969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32197800_32198000
Isoform_64444_4	chr16	-	3071	1	Antisense	novelGene_ENSMUSG00000053774.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32212149	32209078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_32209100_32212100
Isoform_64445_3	chr16	+	175	1	Genic_Genomic	ENSMUSG00000053774.10	novel	NA	NA	NA	NA	61308	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGAGTCATTGTTTTT	NA	False	NA	19	True	AATAAA	-21	NA	32212393	32212568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_+_32212400_32212600
Isoform_64447_3	chr16	+	1263	1	NIC	ENSMUSG00000014075.16	novel	838	5	NA	NA	23	-8064	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAACCCAACAA	NA	False	NA	NA	False	NA	NA	NA	32238586	32239849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_32238600_32239800
Isoform_64449_10	chr16	+	171	1	Intergenic	novelGene_4482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTTTTTTTTTAAA	9312	False	NA	NA	False	NA	NA	NA	32256564	32256735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32256600_32256700
Isoform_64451_5	chr16	-	171	1	Intergenic	novelGene_4483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGTATTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32367502	32367331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_32367300_32367500
Isoform_64454_33	chr16	-	220	1	Intergenic	novelGene_4484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGTACATGACTACCAAC	NA	False	NA	NA	False	AAAAAG	-22	NA	32441212	32440992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_32441000_32441200
Isoform_64468_3	chr16	+	175	1	Intergenic	novelGene_4485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCGAACTA	NA	False	NA	NA	False	NA	NA	NA	32459740	32459915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32459700_32459900
Isoform_64469_9	chr16	+	154	1	Intergenic	novelGene_4486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAAAGCTGTTTT	2302	False	NA	NA	False	NA	NA	NA	32473815	32473969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32473800_32474000
Isoform_6447_4	chr10	+	1803	2	FSM	ENSMUSG00000044312.5	ENSMUST00000050103.2	1540	2	-41	-222	-41	222	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGGTGACTCCATTGT	9223	False	NA	NA	False	AATAAA	-20	NA	61968827	61970764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61969107_61969240
Isoform_64474_3	chr16	+	159	1	Intergenic	novelGene_4487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	32607029	32607188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32607000_32607200
Isoform_64476_4	chr16	+	169	1	Intergenic	novelGene_4488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTGAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	32689994	32690163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32690000_32690200
Isoform_6448_3	chr10	+	1931	5	FSM	ENSMUSG00000020081.6	ENSMUST00000020278.6	2258	5	328	-1	328	1	multi-exon	FALSE	canonical	1	1	junction_2	1.29903810567666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATGTATATGTT	NA	False	NA	NA	False	NA	NA	NA	62088544	62101770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_62088989_62093936_62094132_62096950_62097105_62097262_62097460_62100829
Isoform_64483_10	chr16	+	173	1	Intergenic	novelGene_4489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32845720	32845893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32845700_32845900
Isoform_64484_3	chr16	+	173	1	Intergenic	novelGene_4490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAGAAATAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	32851456	32851629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32851500_32851600
Isoform_64485_6	chr16	+	170	1	Intergenic	novelGene_4491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGGGCTACACAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	32856241	32856411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32856200_32856400
Isoform_64488_42	chr16	+	164	1	Intergenic	novelGene_4492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATCTGCATCCG	NA	False	NA	NA	False	NA	NA	NA	32875861	32876025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32875900_32876000
Isoform_6449_3	chr10	+	2721	5	FSM	ENSMUSG00000020081.6	ENSMUST00000020278.6	2258	5	314	-777	314	777	multi-exon	FALSE	canonical	1	1	junction_2	1.29903810567666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCAGTAGTGACCGGG	NA	False	NA	NA	False	AATAAA	-19	NA	62088530	62102546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_62088989_62093936_62094132_62096950_62097105_62097262_62097460_62100829
Isoform_64493_9	chr16	-	183	1	Intergenic	novelGene_4494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATAAAATCT	NA	False	NA	NA	False	NA	NA	NA	32967971	32967788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_32967800_32968000
Isoform_64494_8	chr16	+	171	1	Intergenic	novelGene_4495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	32971462	32971633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_32971500_32971600
Isoform_64495_9	chr16	-	181	1	Intergenic	novelGene_4496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAGTATTACTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	33190725	33190544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_33190500_33190700
Isoform_64496_26	chr16	+	201	1	Intergenic	novelGene_4497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGCCTCAGAATCCTAGA	6907	False	NA	NA	False	NA	NA	NA	33192069	33192270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_33192100_33192300
Isoform_64499_3	chr16	-	1345	1	Genic_Genomic	ENSMUSG00000097318.3	novel	NA	NA	NA	NA	-16	455	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAAAAAACCCTCT	NA	False	NA	NA	False	AAAAAG	-7	NA	33201113	33199768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_-_33199800_33201100
Isoform_6450_3	chr10	+	541	2	FSM	ENSMUSG00000085347.2	ENSMUST00000143122.2	1218	2	18	659	3	17	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGGCTATTTGAGGG	NA	False	NA	NA	False	NA	NA	NA	62176403	62185647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_62176563_62185265
Isoform_64502_27	chr16	-	170	1	Intergenic	novelGene_4498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	33481354	33481184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_33481200_33481400
Isoform_64504_20	chr16	-	175	1	Intergenic	novelGene_4499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGACACA	NA	False	NA	NA	False	NA	NA	NA	33527778	33527603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_33527600_33527800
Isoform_64505_30	chr16	-	318	1	Intergenic	novelGene_4500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATATCTTCTT	NA	False	NA	NA	False	NA	NA	NA	33618346	33618028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_33618000_33618300
Isoform_64507_159	chr16	+	177	1	Intergenic	novelGene_4501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	33632936	33633113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_33632900_33633100
Isoform_64510_10	chr16	-	177	1	Intergenic	novelGene_4503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATTAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33745724	33745547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_33745500_33745700
Isoform_64513_33	chr16	+	177	1	Intergenic	novelGene_4504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCTTCTCCA	3168	False	NA	NA	False	NA	NA	NA	33802668	33802845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_33802700_33802800
Isoform_64514_11	chr16	-	358	1	FSM	ENSMUSG00000116835.2	ENSMUST00000231993.2	615	1	308	-51	308	51	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	33827519	33827161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_33827200_33827500
Isoform_64519_4	chr16	-	175	1	Intergenic	novelGene_4505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACTAAATTAGGA	NA	False	NA	NA	False	NA	NA	NA	34014801	34014626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_34014600_34014800
Isoform_6452_122	chr10	+	3113	9	FSM	ENSMUSG00000071253.9	ENSMUST00000044977.10	3145	9	32	0	-2	0	multi-exon	FALSE	canonical	3	58	junction_3	11.9314447993527	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGGCTTGGTTTTTT	NA	False	NA	18	True	ATTAAA	-19	NA	62756443	62782277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
Isoform_64520_8	chr16	+	167	1	Intergenic	novelGene_4506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTTTTAAAAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	34476764	34476931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_34476800_34476900
Isoform_64521_121	chr16	+	233	1	Intergenic	novelGene_4507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCAAGCTGAGCACAAA	674	False	NA	NA	False	NA	NA	NA	34650626	34650859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_34650600_34650900
Isoform_64524_9	chr16	+	3066	2	Antisense	novelGene_ENSMUSG00000116840.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTGTCTTGGCTCGTT	NA	False	NA	NA	False	NA	NA	NA	34834111	34837203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_34834554_34834579
Isoform_64525_3	chr16	-	1701	1	Intergenic	novelGene_4508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACGGGAAAAGAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	34845494	34843793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_34843800_34845500
Isoform_64527_24	chr16	-	2027	1	Intergenic	novelGene_4509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34916167	34914140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_34914100_34916200
Isoform_64528_9	chr16	-	176	1	Intergenic	novelGene_4510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATTTCATTATCTCA	NA	False	NA	NA	False	NA	NA	NA	34963939	34963763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_34963800_34963900
Isoform_64529_30	chr16	+	172	1	Intergenic	novelGene_4275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAGAAAAA	2891	False	NA	NA	False	NA	NA	NA	5083840	5084012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_5083800_5084000
Isoform_6453_10	chr10	+	3057	8	NIC	ENSMUSG00000071253.9	novel	3145	9	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	28.5328310719352	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATGGCTTGGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	62756436	62782278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_62756661_62764074_62764168_62766081_62766216_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
Isoform_64534_14	chr16	+	2829	1	NIC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	16	-33210	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATATAAAGGCTGT	5420	False	NA	NA	False	NA	NA	NA	35590760	35593589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_35590800_35593600
Isoform_64536_4	chr16	-	4541	1	Intergenic	novelGene_4511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35617521	35612980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_35613000_35617500
Isoform_64538_10	chr16	-	2401	1	Intergenic	novelGene_4512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35621567	35619166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_35619200_35621600
Isoform_64541_11	chr16	-	179	1	Intergenic	novelGene_4513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACATAGAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	35666785	35666606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_35666600_35666800
Isoform_64543_15	chr16	-	182	1	Intergenic	novelGene_4514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAATAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	35740734	35740552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_35740600_35740700
Isoform_64545_10	chr16	+	155	1	Intergenic	novelGene_4515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAATATAGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	35796580	35796735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_35796600_35796700
Isoform_64546_130	chr6	-	201	1	Intergenic	novelGene_9457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACAAAAGTTCAGAAAG	NA	False	NA	NA	False	NA	NA	NA	83893286	83893085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_83893100_83893300
Isoform_64547_4	chr16	-	171	1	Intergenic	novelGene_4517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAATTAAATAATTTCT	NA	False	NA	NA	False	NA	NA	NA	35812191	35812020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_35812000_35812200
Isoform_64548_25	chr16	-	169	1	Intergenic	novelGene_4518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGATAGTTTGGCGGT	NA	False	NA	NA	False	NA	NA	NA	35819087	35818918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_35818900_35819100
Isoform_64549_65	chr16	-	177	1	Intergenic	novelGene_4519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTTATACATTACAG	NA	False	NA	-8	True	NA	NA	NA	35819392	35819215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_35819200_35819400
Isoform_64552_4	chr16	+	1744	1	FSM	ENSMUSG00000034379.10	ENSMUST00000042203.10	2739	1	40	955	40	-955	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATGATAAACTATCCAA	4418	False	NA	NA	False	AATAAA	-20	NA	35861599	35863343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_35861600_35863300
Isoform_64553_6	chr16	-	176	1	Intergenic	novelGene_4276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5299618	5299442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_5299400_5299600
Isoform_64558_8	chr16	+	695	1	NIC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	0	-12568	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAACAAAAAAACA	NA	False	NA	NA	False	ATTAAA	-16	NA	35892449	35893144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_35892400_35893100
Isoform_64560_23	chr16	-	186	1	Intergenic	novelGene_4520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATCTATTGTTCTATCC	6870	False	NA	NA	False	NA	NA	NA	35925902	35925716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_35925700_35925900
Isoform_64563_9	chr16	+	2414	1	FSM	ENSMUSG00000034243.18	ENSMUST00000023534.7	498	1	9	-1925	9	1925	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAATAAATAAATAAAA	1459	False	NA	NA	False	NA	NA	NA	36695511	36697925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_36695500_36697900
Isoform_64565_57	chr16	-	3345	1	Antisense	novelGene_ENSMUSG00000034206.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36840894	36837549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_36837500_36840900
Isoform_64567_38	chr16	-	180	1	Intergenic	novelGene_4521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	37043985	37043805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_37043800_37044000
Isoform_64568_5	chr16	+	168	1	Intergenic	novelGene_4522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAATAAAAAGATTCGTA	NA	False	NA	NA	False	NA	NA	NA	37273882	37274050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_37273900_37274000
Isoform_6457_696	chr10	+	4106	21	FSM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	12	4	12	2	multi-exon	FALSE	canonical	0	0	junction_20	65.9729300546823	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782816	62809960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
Isoform_6459_72	chr10	+	4147	21	FSM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	-28	3	-28	-2	multi-exon	FALSE	canonical	0	0	junction_20	65.9729300546823	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCACTGAGTCATTTTT	NA	False	NA	56	True	AATAAA	-17	NA	62782776	62809961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
Isoform_64594_5	chr16	-	172	1	Intergenic	novelGene_4523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAATCTCCAAAA	NA	False	NA	NA	False	NA	NA	NA	38123539	38123367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_38123400_38123500
Isoform_64595_9	chr16	-	189	1	Intergenic	novelGene_4524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAGCAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	38151816	38151627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_38151600_38151800
Isoform_64596_101	chr16	-	202	1	Intergenic	novelGene_4525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGATAATAGCGAGATTAT	NA	False	NA	NA	False	NA	NA	NA	38163571	38163369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_38163400_38163600
Isoform_64600_3	chr16	+	1183	1	Intergenic	novelGene_4526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	38303784	38304967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_38303800_38305000
Isoform_64601_5	chr16	+	3673	1	Genic_Genomic	ENSMUSG00000075122.6	novel	NA	NA	NA	NA	35976	2431	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38315455	38319128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_+_38315500_38319100
Isoform_64602_4	chr16	-	681	1	NIC	ENSMUSG00000002846.10	novel	1573	7	NA	NA	13	-5288	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	38342990	38342309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_38342300_38343000
Isoform_64610_3	chr16	-	177	1	Intergenic	novelGene_4527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTATTTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	38413811	38413634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_38413600_38413800
Isoform_64611_5	chr16	+	176	1	Intergenic	novelGene_4528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAGACGCTA	NA	False	NA	NA	False	NA	NA	NA	38753032	38753208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_38753000_38753200
Isoform_64613_15	chr16	-	175	1	Intergenic	novelGene_4529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTATTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	40067174	40066999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_40067000_40067200
Isoform_64614_1311	chr16	+	503	1	FSM	ENSMUSG00000081824.6	ENSMUST00000121906.2	319	1	-71	-113	-71	113	mono-exon	FALSE	NA	NA	NA	NA	NA	1311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATAATGAAC	NA	False	NA	NA	False	AATAAA	-16	NA	42775922	42776425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_42775900_42776400
Isoform_64616_70	chr16	-	177	1	Intergenic	novelGene_4530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAACCCT	NA	False	NA	NA	False	NA	NA	NA	43561844	43561667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_43561700_43561800
Isoform_64618_60	chr16	-	6978	1	Intergenic	novelGene_4531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	43591546	43584568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_43584600_43591500
Isoform_64621_41	chr16	-	180	1	Intergenic	novelGene_4532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTGTTCTTAGAGT	NA	False	NA	NA	False	NA	NA	NA	43705238	43705058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_43705100_43705200
Isoform_64622_3	chr16	+	1205	1	NIC	ENSMUSG00000022701.19	novel	3779	17	NA	NA	10	-17369	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-20	NA	43710271	43711476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_43710300_43711500
Isoform_64625_3	chr16	-	8021	1	Intergenic	novelGene_4277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTTGGCTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	8380705	8372684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_8372700_8380700
Isoform_64627_3	chr16	-	187	1	Intergenic	novelGene_4533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	43900350	43900163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_43900200_43900400
Isoform_64638_6	chr16	+	176	1	Intergenic	novelGene_4534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAAAGTAAAT	NA	False	NA	NA	False	NA	NA	NA	43948482	43948658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_43948500_43948700
Isoform_64641_37	chr16	+	168	1	Intergenic	novelGene_4278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8398992	8399160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_8399000_8399200
Isoform_64665_6	chr16	+	185	1	Intergenic	novelGene_4535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGTAAAACTTACATAAG	NA	False	NA	NA	False	AATAAA	-36	NA	44048462	44048647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_44048500_44048600
Isoform_64667_5	chr16	-	182	1	Intergenic	novelGene_4536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATCAGAGACTC	8389	False	NA	NA	False	NA	NA	NA	44053110	44052928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_44052900_44053100
Isoform_64668_15	chr16	+	177	1	Intergenic	novelGene_4537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACATTTCAA	6846	False	NA	NA	False	NA	NA	NA	44130416	44130593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_44130400_44130600
Isoform_64672_6	chr16	+	173	1	Intergenic	novelGene_4538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	44503938	44504111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_44503900_44504100
Isoform_64673_4	chr16	-	3415	1	Antisense	novelGene_ENSMUSG00000022663.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44986338	44982923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_44982900_44986300
Isoform_64678_12	chr16	+	4826	1	Genic_Genomic	ENSMUSG00000086237.2	novel	NA	NA	NA	NA	-4617	-607	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45552248	45557074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_+_45552200_45557100
Isoform_64680_7	chr16	-	176	1	Intergenic	novelGene_4540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGTAGATGAAAT	NA	False	NA	NA	False	NA	NA	NA	45637982	45637806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_45637800_45638000
Isoform_64681_16	chr16	+	196	1	Intergenic	novelGene_4541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGCTTCCTATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	45750375	45750571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_45750400_45750600
Isoform_64683_3	chr16	-	3403	1	NIC	ENSMUSG00000043140.11	novel	3391	2	NA	NA	179	-902	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTGCGTTTCGTAGCT	NA	False	NA	-1	True	NA	NA	NA	8455397	8451994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_8452000_8455400
Isoform_64685_5063	chr16	-	2081	1	FSM	ENSMUSG00000048087.7	ENSMUST00000059524.7	2093	1	1	11	1	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	5063	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAATAA	NA	False	NA	NA	False	GATAAA	-20	NA	45975439	45973358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_45973400_45975400
Isoform_64706_16	chr16	+	2862	1	Intergenic	novelGene_4542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46298845	46301707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_46298800_46301700
Isoform_64707_16	chr16	-	174	1	Intergenic	novelGene_4543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	46344314	46344140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_46344100_46344300
Isoform_64711_5	chr16	-	175	1	Intergenic	novelGene_4544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47468841	47468666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_47468700_47468800
Isoform_64713_4	chr16	-	213	1	Intergenic	novelGene_4545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTTAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	48028392	48028179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_48028200_48028400
Isoform_64715_42	chr16	+	177	1	Intergenic	novelGene_4546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	48102865	48103042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_48102900_48103000
Isoform_64716_11	chr16	-	2322	1	Antisense	novelGene_ENSMUSG00000058550.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGGAAAAAAAAGTTAGAAC	NA	False	NA	NA	False	NA	NA	NA	48111715	48109393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_48109400_48111700
Isoform_64719_82	chr16	-	183	1	Intergenic	novelGene_4279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	8474218	8474035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_8474000_8474200
Isoform_64721_3	chr16	+	177	1	Intergenic	novelGene_4547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGAAAAGAATACAG	NA	False	NA	NA	False	NA	NA	NA	48146492	48146669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_48146500_48146700
Isoform_64722_37	chr16	+	181	1	Intergenic	novelGene_4548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTGTGATGGCTG	NA	False	NA	NA	False	NA	NA	NA	48150218	48150399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_48150200_48150400
Isoform_64724_102	chr19	-	170	1	Intergenic	novelGene_5571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGACATTTCT	8897	False	NA	NA	False	NA	NA	NA	3747330	3747160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_3747200_3747300
Isoform_64727_17	chr16	-	2901	1	Intergenic	novelGene_4549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTGTGTGTTCAGGCT	NA	False	NA	NA	False	NA	NA	NA	48422120	48419219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_48419200_48422100
Isoform_64733_17	chr16	-	459	1	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	-47942	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4420	False	NA	NA	False	NA	NA	NA	48814305	48813846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_48813800_48814300
Isoform_64734_3	chr16	-	3173	1	Antisense	novelGene_ENSMUSG00000055447.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	49731898	49728725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_49728700_49731900
Isoform_64743_6	chr16	+	304	1	Intergenic	novelGene_4550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGTCCTCATATGGCC	NA	False	NA	NA	False	ATTAAA	-4	NA	50812253	50812557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_50812300_50812600
Isoform_64748_188	chr6	-	178	1	Intergenic	novelGene_9588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120534393	120534215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_120534200_120534400
Isoform_64749_15	chr16	+	209	1	Intergenic	novelGene_4551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAATTTTCCTAGGATCT	NA	False	NA	NA	False	NA	NA	NA	52842784	52842993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_52842800_52843000
Isoform_6475_93	chr10	+	4117	18	FSM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	12	1	2	-1	multi-exon	FALSE	canonical	3	50	junction_14	9.76718607764962	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCTAAGAAATTAACACT	NA	False	NA	NA	False	AATAAA	-20	NA	62816032	62849733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
Isoform_64750_5	chr16	+	179	1	Intergenic	novelGene_4552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATGATCAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	54415717	54415896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_54415700_54415900
Isoform_64751_5	chr16	+	175	1	Intergenic	novelGene_4553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGGGGGGTAT	NA	False	NA	NA	False	NA	NA	NA	54970072	54970247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_54970100_54970200
Isoform_64752_66	chr16	-	158	1	Intergenic	novelGene_4554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	55358031	55357873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_55357900_55358000
Isoform_64756_33	chr16	+	181	1	Intergenic	novelGene_4555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55716383	55716564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_55716400_55716600
Isoform_64758_45	chr16	-	168	1	Intergenic	novelGene_4556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATTTTAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	55770503	55770335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_55770300_55770500
Isoform_64759_28	chr16	-	2349	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	963	-1962	963	1962	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTC	4938	False	NA	NA	False	NA	NA	NA	55794017	55791668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55791700_55794000
Isoform_64761_21	chr16	-	1322	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	27	1	27	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTTTCCTTGTAATGC	4002	False	NA	NA	False	ATTAAA	-23	NA	55794953	55793631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_55793600_55795000
Isoform_64777_6	chr16	+	170	1	Intergenic	novelGene_4557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAATCACTACG	NA	False	NA	NA	False	NA	NA	NA	55876047	55876217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_55876000_55876200
Isoform_64779_3	chr16	-	165	1	Intergenic	novelGene_4558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	5051	False	NA	NA	False	NA	NA	NA	55890331	55890166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_55890200_55890300
Isoform_6478_8	chr10	+	4180	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	17.5952179725552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATCTAAGAAATTAACA	NA	False	NA	NA	False	AATAAA	-18	NA	62816010	62849731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840392_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
Isoform_64780_26	chr16	+	176	1	Intergenic	novelGene_4559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	55897827	55898003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_55897800_55898000
Isoform_64781_103	chr16	+	177	1	Intergenic	novelGene_4260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTTCCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	3607789	3607966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_3607800_3608000
Isoform_6479_3	chr10	+	3284	3	ISM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	28315	8	6300	-8	3prime_fragment	FALSE	canonical	3	75	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCGAAGATCTAAGAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	62844335	62849726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_62845184_62847196_62847275_62847368
Isoform_64796_3	chr18	-	159	1	Intergenic	novelGene_5474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	65732472	65732313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_65732300_65732500
Isoform_64798_8	chr16	+	174	1	Intergenic	novelGene_4281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	8587222	8587396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_8587200_8587400
Isoform_6480_9	chr10	+	1402	3	FSM	ENSMUSG00000020072.16	ENSMUST00000130531.2	847	3	130	-685	130	0	multi-exon	FALSE	canonical	2	8	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATTTGGTGAAATT	4459	False	NA	NA	False	AATAAA	-16	NA	62890118	62894592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_62890285_62892557_62892621_62893419
Isoform_64804_69	chr16	-	292	1	Intergenic	novelGene_4561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACGTACGCAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	57211953	57211661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_57211700_57212000
Isoform_6481_3	chr10	+	1481	3	FSM	ENSMUSG00000020072.16	ENSMUST00000130531.2	847	3	51	-685	51	0	multi-exon	FALSE	canonical	2	8	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATTTGGTGAAATT	4380	False	NA	NA	False	AATAAA	-16	NA	62890039	62894592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_62890285_62892557_62892621_62893419
Isoform_64815_3	chr16	-	154	1	Intergenic	novelGene_4562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCTTTGGGCCAGAAT	NA	False	NA	NA	False	NA	NA	NA	58556404	58556250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_58556200_58556400
Isoform_64816_26	chr17	-	176	1	Intergenic	novelGene_5037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48240008	48239832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_48239800_48240000
Isoform_64821_5	chr16	+	2255	1	FSM	ENSMUSG00000092029.2	ENSMUST00000165914.2	661	1	211	-1805	211	1805	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	61197829	61200084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_61197800_61200100
Isoform_64823_6	chr16	+	2056	1	FSM	ENSMUSG00000092029.2	ENSMUST00000165914.2	661	1	409	-1804	409	1804	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	61198027	61200083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_61198000_61200100
Isoform_64824_9	chr16	+	1940	1	FSM	ENSMUSG00000092029.2	ENSMUST00000165914.2	661	1	526	-1805	526	1805	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	61198144	61200084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_61198100_61200100
Isoform_6483_15	chr10	+	3888	26	FSM	ENSMUSG00000020064.10	ENSMUST00000219577.2	3914	26	24	2	3	2	multi-exon	FALSE	canonical	3	20	junction_16	90.360929610092	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079725	63153655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_64831_13	chr16	-	357	1	Intergenic	novelGene_4282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8601265	8600908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_8600900_8601300
Isoform_64833_164	chr16	+	1871	1	FSM	ENSMUSG00000085783.4	ENSMUST00000122292.2	1414	1	-75	-382	-75	382	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTTAAGGACAGAGCC	NA	False	NA	NA	False	ATTAAA	-40	NA	62537324	62539195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_62537300_62539200
Isoform_64834_10	chr16	-	178	1	Intergenic	novelGene_4563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTTAGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	62600672	62600494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_62600500_62600700
Isoform_64835_567	chr16	+	156	1	Intergenic	novelGene_4283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	567	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	8605622	8605778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_8605600_8605800
Isoform_64837_15	chr16	-	177	1	Intergenic	novelGene_4564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATTAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	62902849	62902672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_62902700_62902800
Isoform_64838_4	chr16	+	176	1	Antisense	novelGene_ENSMUSG00000059920.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGC	NA	False	NA	NA	False	NA	NA	NA	64585328	64585504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_64585300_64585500
Isoform_64841_33	chr16	-	174	1	Intergenic	novelGene_4565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	64638356	64638182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_64638200_64638400
Isoform_64868_71	chr16	-	177	1	Intergenic	novelGene_4566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	64684750	64684573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_64684600_64684800
Isoform_64869_12	chr16	+	159	1	Intergenic	novelGene_4567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64696021	64696180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_64696000_64696200
Isoform_64871_11	chr16	+	175	1	Intergenic	novelGene_4284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTAATATGTTAG	NA	False	NA	NA	False	NA	NA	NA	8616739	8616914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_8616700_8616900
Isoform_64872_4	chr16	-	245	1	Intergenic	novelGene_4568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAAACTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	64706090	64705845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_64705800_64706100
Isoform_64875_92	chr16	-	181	1	Intergenic	novelGene_4569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64727105	64726924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_64726900_64727100
Isoform_64877_35	chr16	-	158	1	Intergenic	novelGene_4570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	64883168	64883010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_64883000_64883200
Isoform_64878_17	chr3	-	158	1	Intergenic	novelGene_7147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	5305	False	NA	NA	False	NA	NA	NA	89886167	89886009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_89886000_89886200
Isoform_64879_7	chr16	+	175	1	Intergenic	novelGene_4571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAATATAGAA	NA	False	NA	NA	False	NA	NA	NA	66532608	66532783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_66532600_66532800
Isoform_64882_128	chr16	-	176	1	Intergenic	novelGene_4285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	2569	False	NA	NA	False	NA	NA	NA	8621361	8621185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_8621200_8621400
Isoform_64883_3	chr16	-	202	1	Intergenic	novelGene_4572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTATTTCTAGAACTA	NA	False	NA	NA	False	NA	NA	NA	67482439	67482237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_67482200_67482400
Isoform_64884_8	chr16	-	4206	1	Intergenic	novelGene_4573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCTGGTTTGTTGAGT	NA	False	NA	NA	False	NA	NA	NA	68423509	68419303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_68419300_68423500
Isoform_64885_13	chr16	+	172	1	Intergenic	novelGene_4286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	2969	False	NA	NA	False	NA	NA	NA	8622773	8622945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_8622800_8622900
Isoform_64886_31	chr5	-	172	1	ISM	ENSMUSG00000036285.11	ENSMUST00000150451.2	577	2	764	1	764	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	77451398	77451226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr5_-_77451200_77451400
Isoform_64887_10	chr16	+	192	1	Intergenic	novelGene_4575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGGTTATTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72457764	72457956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_72457800_72458000
Isoform_64888_62	chr16	-	184	1	Intergenic	novelGene_4576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	73300915	73300731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_73300700_73300900
Isoform_64889_7	chr16	+	176	1	Intergenic	novelGene_4577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAAGACAAT	NA	False	NA	NA	False	NA	NA	NA	74096684	74096860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_74096700_74096900
Isoform_6489_8	chr10	+	4060	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-159	-3	-58	-1	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	16	True	AATAAA	-30	NA	63079530	63153656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_64890_12	chr16	+	169	1	Intergenic	novelGene_4578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATTTGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	74173541	74173710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_74173500_74173700
Isoform_64891_4	chr16	+	161	1	Intergenic	novelGene_4579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAGATTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75614798	75614959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_75614800_75615000
Isoform_64897_4	chr16	+	177	1	Intergenic	novelGene_4580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAAGAAAGGAGGGG	NA	False	NA	NA	False	NA	NA	NA	75816211	75816388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_75816200_75816400
Isoform_64899_1384	chr16	-	506	1	FSM	ENSMUSG00000050299.9	ENSMUST00000052867.9	402	1	-59	-45	-59	45	mono-exon	FALSE	NA	NA	NA	NA	NA	1384	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTAC	NA	False	NA	-16	True	AATAAA	-16	NA	76200599	76200093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_76200100_76200600
Isoform_6490_188	chr10	+	4001	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-100	-3	1	-1	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	16	True	AATAAA	-30	NA	63079589	63153656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_64908_6	chr16	-	160	1	Intergenic	novelGene_4261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	3666556	3666396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_3666400_3666600
Isoform_64909_44	chr16	-	175	1	Intergenic	novelGene_4287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGACTATATTTTC	NA	False	NA	NA	False	NA	NA	NA	8642201	8642026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_8642000_8642200
Isoform_64915_19	chr16	-	2554	1	NIC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	1	-26198	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGACAAAAAAAAAAAAAC	3244	False	NA	NA	False	NA	NA	NA	78373544	78370990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_78371000_78373500
Isoform_64916_39	chr16	-	4203	1	Intergenic	novelGene_4581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	82008776	82004573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_82004600_82008800
Isoform_64918_4	chr16	-	177	1	Intergenic	novelGene_4582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGCAAAGCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	82113427	82113250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_82113200_82113400
Isoform_6492_201	chr10	+	3893	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	13	-8	1	4	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTCTATGGTTGTAAT	NA	False	NA	21	True	AATAAA	-35	NA	63079702	63153661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_64920_5	chr16	+	157	1	Intergenic	novelGene_4583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	84516670	84516827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_84516700_84516800
Isoform_64921_8	chr16	+	197	1	Intergenic	novelGene_4584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84526599	84526796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_84526600_84526800
Isoform_64923_151	chr16	-	219	1	Intergenic	novelGene_4585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGCTGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	84566055	84565836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_84565800_84566100
Isoform_64942_4	chr16	-	1433	1	Intergenic	novelGene_4586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAAAGGGGGGG	NA	False	NA	NA	False	CATAAA	-32	NA	84651189	84649756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_84649800_84651200
Isoform_64962_69	chr16	-	176	1	Intergenic	novelGene_4587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	84843033	84842857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_84842900_84843000
Isoform_64963_5	chr16	-	1968	1	FSM	ENSMUSG00000089698.2	ENSMUST00000161209.2	711	1	9	-1266	9	1266	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-13	NA	85350822	85348854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_85348900_85350800
Isoform_64965_11	chr16	+	193	1	Intergenic	novelGene_4588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTATGCGTTGGCCAA	NA	False	NA	NA	False	NA	NA	NA	85582389	85582582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_85582400_85582600
Isoform_64966_3	chr16	+	284	1	Intergenic	novelGene_4589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAGAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	85582389	85582673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_85582400_85582700
Isoform_64967_129	chr16	-	172	1	Intergenic	novelGene_4590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGAG	NA	False	NA	NA	False	NA	NA	NA	86719067	86718895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_86718900_86719100
Isoform_64968_89	chr16	-	175	1	Intergenic	novelGene_4591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGATGCATCT	NA	False	NA	NA	False	NA	NA	NA	87073277	87073102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_87073100_87073300
Isoform_64970_10	chr16	+	293	1	Intergenic	novelGene_4592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	87204392	87204685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_87204400_87204700
Isoform_64971_53	chr16	+	174	1	Intergenic	novelGene_4593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAATAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	87234455	87234629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_87234500_87234600
Isoform_64973_3	chr16	+	159	1	Intergenic	novelGene_4594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	87285169	87285328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_87285200_87285300
Isoform_64977_9	chr16	+	1527	1	Intergenic	novelGene_4595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89743863	89745390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_89743900_89745400
Isoform_64978_8	chr16	-	167	1	Intergenic	novelGene_4596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATCTTAAAAAAAA	7264	False	NA	NA	False	NA	NA	NA	89825949	89825782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_89825800_89825900
Isoform_64979_22	chr16	+	2117	1	Intergenic	novelGene_4597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89847137	89849254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_89847100_89849300
Isoform_64981_26	chr16	+	166	1	Intergenic	novelGene_4598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAAGGAGGCT	NA	False	NA	NA	False	NA	NA	NA	89921167	89921333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_89921200_89921300
Isoform_64983_3	chr16	-	183	1	Intergenic	novelGene_4599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACAAAACAAGAGC	5785	False	NA	NA	False	NA	NA	NA	89955036	89954853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_89954900_89955000
Isoform_64984_9	chr16	+	173	1	Intergenic	novelGene_4600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAAAAGGAAGCT	NA	False	NA	NA	False	NA	NA	NA	89967782	89967955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_89967800_89968000
Isoform_64988_3	chr16	-	1089	1	Intergenic	novelGene_4601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAAAGACACAC	NA	False	NA	NA	False	NA	NA	NA	90017504	90016415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_90016400_90017500
Isoform_64993_47	chr16	+	173	1	Intergenic	novelGene_4602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATTAAAGTAAT	NA	False	NA	NA	False	NA	NA	NA	90060428	90060601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_90060400_90060600
Isoform_64994_3	chr16	+	1510	1	Intergenic	novelGene_4603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	90081509	90083019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_90081500_90083000
Isoform_64995_15	chr16	-	178	1	Intergenic	novelGene_4604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAATGTTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	90089850	90089672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_90089700_90089800
Isoform_64996_4	chr16	+	210	1	Intergenic	novelGene_4605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	151	False	NA	NA	False	NA	NA	NA	90090079	90090289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_90090100_90090300
Isoform_64998_10	chr16	-	248	1	Intergenic	novelGene_4606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCCCGCCCCTAGGTG	NA	False	NA	NA	False	NA	NA	NA	90094037	90093789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_90093800_90094000
Isoform_65001_13	chr16	-	184	1	Intergenic	novelGene_4607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAATTACTC	NA	False	NA	NA	False	NA	NA	NA	90106510	90106326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_90106300_90106500
Isoform_65002_85	chr16	+	176	1	Intergenic	novelGene_4608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90109213	90109389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_90109200_90109400
Isoform_65003_80	chr16	-	176	1	Intergenic	novelGene_4609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	90119593	90119417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_90119400_90119600
Isoform_65006_3	chr16	+	1514	1	NIC	ENSMUSG00000053414.9	novel	5393	11	NA	NA	426	-94072	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	90183326	90184840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_90183300_90184800
Isoform_65014_3	chr16	-	2882	1	Genic_Genomic	ENSMUSG00000116348.2	novel	NA	NA	NA	NA	-2069	-2155	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGACTCAATCAAGATC	NA	False	NA	NA	False	NA	NA	NA	8927703	8924821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_-_8924800_8927700
Isoform_65015_3	chr16	+	4469	1	Antisense	novelGene_ENSMUSG00000022973.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7054	False	NA	NA	False	NA	NA	NA	90754373	90758842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_90754400_90758800
Isoform_65016_394	chr16	+	177	1	Intergenic	novelGene_4610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90781692	90781869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_90781700_90781900
Isoform_65023_165	chr16	+	178	1	Intergenic	novelGene_4611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGAGAGAGGGCCCTG	NA	False	NA	31	True	NA	NA	NA	91168938	91169116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_91168900_91169100
Isoform_65024_12	chr16	+	178	1	Intergenic	novelGene_4612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAG	9315	False	NA	NA	False	NA	NA	NA	91234886	91235064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_91234900_91235100
Isoform_65026_32	chr16	-	175	1	Intergenic	novelGene_4613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTCCAG	NA	False	NA	NA	False	NA	NA	NA	91284797	91284622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_91284600_91284800
Isoform_65031_14	chr16	+	177	1	Intergenic	novelGene_4614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTTTTTAAAAAATAAA	4214	False	NA	NA	False	NA	NA	NA	91381756	91381933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_91381800_91381900
Isoform_65032_5	chr16	+	171	1	Intergenic	novelGene_4615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGTAGAACT	1029	False	NA	NA	False	NA	NA	NA	91392854	91393025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_91392900_91393000
Isoform_65033_44	chr16	-	176	1	Intergenic	novelGene_4616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	9290	False	NA	NA	False	NA	NA	NA	91397605	91397429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_91397400_91397600
Isoform_65036_10	chr16	+	2413	1	Antisense	novelGene_ENSMUSG00000022962.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATCAAA	2434	False	NA	NA	False	NA	NA	NA	91427854	91430267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_91427900_91430300
Isoform_65037_6	chr16	+	222	1	Intergenic	novelGene_4617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAAAAAAGGTGTGTGT	NA	False	NA	NA	False	AAAAAG	-21	NA	91442227	91442449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_91442200_91442400
Isoform_65040_7	chr16	+	178	1	Intergenic	novelGene_4618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAGAAAA	5022	False	NA	NA	False	NA	NA	NA	91497669	91497847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_91497700_91497800
Isoform_65041_44	chr16	-	1998	1	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	4	-11604	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATGAAA	9184	False	NA	NA	False	NA	NA	NA	91525507	91523509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_91523500_91525500
Isoform_65044_4	chr16	+	172	1	Intergenic	novelGene_4619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	4945	False	NA	NA	False	NA	NA	NA	91638788	91638960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_91638800_91639000
Isoform_65046_6	chr16	+	644	1	NIC	ENSMUSG00000039680.11	novel	846	3	NA	NA	52	-53262	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAATCTTT	6337	False	NA	NA	False	NA	NA	NA	91855209	91855853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_91855200_91855900
Isoform_65047_15	chr16	-	6718	1	Antisense	novelGene_ENSMUSG00000089774.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91884475	91877757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_91877800_91884500
Isoform_65049_42	chr16	-	175	1	Intergenic	novelGene_4288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	8999277	8999102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_8999100_8999300
Isoform_65052_5	chr16	+	228	1	Intergenic	novelGene_4621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTTGTTCTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	92133523	92133751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_92133500_92133800
Isoform_65054_6	chr16	+	217	1	Intergenic	novelGene_4622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCAATCTGAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	92314958	92315175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_92315000_92315200
Isoform_65056_27	chr16	+	178	1	Antisense	novelGene_ENSMUSG00000022948.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGAGTAAG	NA	False	NA	NA	False	NA	NA	NA	93385606	93385784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_93385600_93385800
Isoform_65057_6	chr16	-	555	1	Genic_Genomic	ENSMUSG00000022948.17	novel	NA	NA	NA	NA	-7	-12190	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93400710	93400155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_-_93400200_93400700
Isoform_65058_5	chr16	-	795	1	NIC	ENSMUSG00000022948.17	novel	539	5	NA	NA	1	-12190	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93400950	93400155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_93400200_93401000
Isoform_65062_3	chr16	-	2967	1	Genic_Genomic	ENSMUSG00000097768.3	novel	NA	NA	NA	NA	-164	37	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTAGGCTTGGACT	6407	False	NA	NA	False	AATATA	-16	NA	93591953	93588986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_-_93589000_93592000
Isoform_65063_4	chr16	+	153	1	Intergenic	novelGene_4623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGAAGGCTGAGTCCCT	NA	False	NA	NA	False	NA	NA	NA	93590712	93590865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_93590700_93590900
Isoform_65064_45	chr16	+	177	1	Intergenic	novelGene_4624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93655117	93655294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_93655100_93655300
Isoform_65071_8	chr16	+	178	1	Intergenic	novelGene_4626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGACAAGCATA	NA	False	NA	NA	False	NA	NA	NA	94203666	94203844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_94203700_94203800
Isoform_65072_3	chr16	-	174	1	Intergenic	novelGene_4627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACAATCCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	94292760	94292586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_94292600_94292800
Isoform_65073_4	chr16	+	402	1	Intergenic	novelGene_4628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAATTTCTCTGTAAAG	NA	False	NA	NA	False	AATATA	-15	NA	94327838	94328240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_94327800_94328200
Isoform_65075_57	chr16	-	177	1	Intergenic	novelGene_4629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAAATGATTC	3231	False	NA	NA	False	NA	NA	NA	94356130	94355953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_94356000_94356100
Isoform_65076_32	chr10	+	199	1	Intergenic	novelGene_1009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77179796	77179995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_77179800_77180000
Isoform_65077_4	chr16	+	184	1	Intergenic	novelGene_4289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAGAAATATGAAG	NA	False	NA	NA	False	NA	NA	NA	9521640	9521824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_9521600_9521800
Isoform_65078_4	chr16	+	156	1	Intergenic	novelGene_4630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATTTTTTAAAAAA	3979	False	NA	NA	False	NA	NA	NA	94463938	94464094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_94463900_94464100
Isoform_65081_3	chr16	-	175	1	Intergenic	novelGene_4631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCAGGGACTGAGTGAG	NA	False	NA	NA	False	NA	NA	NA	94531645	94531470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_94531500_94531600
Isoform_65082_4	chr16	-	176	1	Intergenic	novelGene_4632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGACCCACCAGAACCCA	NA	False	NA	NA	False	NA	NA	NA	94597960	94597784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_94597800_94598000
Isoform_65083_7	chr16	-	2027	1	Intergenic	novelGene_4262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTGTGGTGGAGCACG	8580	False	NA	NA	False	NA	NA	NA	3709578	3707551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_3707600_3709600
Isoform_65084_4	chr16	-	184	1	Intergenic	novelGene_4633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	95127010	95126826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_95126800_95127000
Isoform_65085_3	chr16	+	181	1	Intergenic	novelGene_4634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAGGAAGAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	95220888	95221069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_95220900_95221100
Isoform_65086_6	chr16	+	180	1	Intergenic	novelGene_4635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAATGAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	95319120	95319300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_95319100_95319300
Isoform_65087_3	chr16	-	1147	1	Antisense	novelGene_ENSMUSG00000022895.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAACATAG	NA	False	NA	NA	False	NA	NA	NA	95503226	95502079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_95502100_95503200
Isoform_65089_40	chr16	-	162	1	Intergenic	novelGene_4636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACTCAGTTCACAGGTG	NA	False	NA	NA	False	NA	NA	NA	95570126	95569964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_95570000_95570100
Isoform_6509_15	chr10	+	1255	5	FSM	ENSMUSG00000036764.13	ENSMUST00000043317.7	3025	5	21	1749	13	0	multi-exon	TRUE	canonical	3	25	junction_2	1.58113883008419	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGCATTTAGGATGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	63222362	63244606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_63222555_63231563_63231643_63233017_63233158_63242780_63242986_63243967
Isoform_65091_4	chr16	-	172	1	Intergenic	novelGene_4637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATAGATTTAT	NA	False	NA	NA	False	NA	NA	NA	95643970	95643798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_95643800_95644000
Isoform_65092_197	chr16	-	227	1	Intergenic	novelGene_4638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTGTAGCTTTGTT	7195	False	NA	NA	False	AAGAAA	-29	NA	95761926	95761699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_95761700_95761900
Isoform_65093_4	chr16	-	1013	1	Intergenic	novelGene_4639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAAGGCTTTCCAGTC	6377	False	NA	NA	False	NA	NA	NA	95762744	95761731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_95761700_95762700
Isoform_65094_3	chr16	-	739	1	Genic_Genomic	ENSMUSG00000022914.18	novel	NA	NA	NA	NA	9556	552	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGCAAAAAAAAAA	8063	False	NA	NA	False	ATTAAA	-10	NA	95800657	95799918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_-_95799900_95800700
Isoform_65098_13	chr16	+	2933	1	Intergenic	novelGene_4641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-15	NA	95862717	95865650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_95862700_95865600
Isoform_651_165	SIRV3	-	160	1	FSM	SIRV3D	SIRV311	161	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAAGATTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	4761	4601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV3_-_4600_4800
Isoform_65101_3	chr16	-	172	1	Intergenic	novelGene_4642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGAGGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	95904733	95904561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_95904600_95904700
Isoform_65102_16	chr16	+	177	1	Intergenic	novelGene_4643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	95913776	95913953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_95913800_95914000
Isoform_65103_17	chr16	-	176	1	Intergenic	novelGene_4644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGACTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	95918739	95918563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_95918600_95918700
Isoform_6511_22	chr10	+	8436	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	34.4406736287199	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGATGTTACAGTTCTC	NA	False	NA	14	True	ATTAAA	-15	NA	66932274	67092098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
Isoform_65116_9	chr16	+	789	1	Intergenic	novelGene_4645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCGTGTGTATGTACA	10021	False	NA	NA	False	AATAAA	-17	NA	96155440	96156229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_96155400_96156200
Isoform_65118_19	chr16	-	175	1	Intergenic	novelGene_4646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGAGTTAAC	NA	False	NA	NA	False	NA	NA	NA	97058988	97058813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_97058800_97059000
Isoform_65121_11	chr16	+	2753	1	Antisense	novelGene_ENSMUSG00000014039.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAACAAAACCAGACCG	NA	False	NA	NA	False	NA	NA	NA	97619584	97622337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_97619600_97622300
Isoform_65123_3	chr16	-	1961	3	Intergenic	novelGene_4647	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97748134	97746103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_97747116_97747157_97748046_97748073
Isoform_65125_5	chr16	-	3989	1	Genic_Genomic	ENSMUSG00000045975.9_ENSMUSG00000046962.17	novel	NA	NA	NA	NA	-10	-5694	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGTAATT	NA	False	NA	NA	False	NA	NA	NA	97763832	97759843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_-_97759800_97763800
Isoform_65126_9	chr16	+	161	1	Intergenic	novelGene_4648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	97792785	97792946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_97792800_97792900
Isoform_65127_14	chr16	+	183	1	Intergenic	novelGene_4290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAAAACAACTACA	NA	False	NA	NA	False	NA	NA	NA	10123153	10123336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_10123200_10123300
Isoform_6513_11	chr10	+	8621	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-98	-3	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	34.4406736287199	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGGATGTTACAGT	NA	False	NA	10	True	ATTAAA	-11	NA	66932085	67092094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
Isoform_65130_4	chr16	+	952	1	Genic_Genomic	ENSMUSG00000116389.2	novel	NA	NA	NA	NA	-564	-1633	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	3164211	3165163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_+_3164200_3165200
Isoform_65132_17	chr16	+	857	1	Genic_Genomic	ENSMUSG00000116389.2	novel	NA	NA	NA	NA	-472	-1636	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAACAGGAA	NA	False	NA	NA	False	NA	NA	NA	3164303	3165160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_+_3164300_3165200
Isoform_65133_140	chr16	+	768	1	Genic_Genomic	ENSMUSG00000116389.2	novel	NA	NA	NA	NA	-380	-1633	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	3164395	3165163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_+_3164400_3165200
Isoform_65135_6	chr16	-	205	1	Intergenic	novelGene_4291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGACAAAGTTTGGAAC	NA	False	NA	NA	False	NA	NA	NA	10547716	10547511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_10547500_10547700
Isoform_65136_28	chr16	-	1265	1	NIC	ENSMUSG00000038037.6	novel	2908	2	NA	NA	453	-1576	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACAAAGATTCCTAG	NA	False	NA	NA	False	AATAAA	-25	NA	10602947	10601682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10601700_10602900
Isoform_65137_3	chr16	-	1716	1	NIC	ENSMUSG00000038037.6	novel	2908	2	NA	NA	1	-1577	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACAAAGATTCCTA	NA	False	NA	NA	False	AATAAA	-24	NA	10603399	10601683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_10601700_10603400
Isoform_65139_20	chr16	-	158	1	Intergenic	novelGene_4263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	3759228	3759070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_3759100_3759200
Isoform_65141_6	chr16	-	173	1	Intergenic	novelGene_4292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	10838833	10838660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_10838700_10838800
Isoform_65144_9	chr11	+	164	1	Intergenic	novelGene_1759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	75678578	75678742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_75678600_75678700
Isoform_65146_26	chr16	-	212	1	Intergenic	novelGene_4294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCAATGCCTGTTA	7498	False	NA	NA	False	NA	NA	NA	10998591	10998379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_10998400_10998600
Isoform_65147_4	chr16	-	178	1	Intergenic	novelGene_4295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAGAAAAGA	4868	False	NA	NA	False	NA	NA	NA	11001221	11001043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_11001000_11001200
Isoform_65150_3	chr16	-	2243	1	Intergenic	novelGene_4296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTGTCTGTTTATAA	NA	False	NA	-1	True	AATAAA	-21	NA	11036693	11034450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_11034400_11036700
Isoform_65152_17	chr16	+	177	1	Intergenic	novelGene_4297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGTAGGG	2713	False	NA	NA	False	NA	NA	NA	11080591	11080768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_11080600_11080800
Isoform_65153_7	chr12	+	176	1	Intergenic	novelGene_2400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTTAT	NA	False	NA	NA	False	NA	NA	NA	4455929	4456105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_4455900_4456100
Isoform_65157_18	chr16	-	346	1	Intergenic	novelGene_4298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATGATAACATGA	NA	False	NA	NA	False	NA	NA	NA	11119837	11119491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_11119500_11119800
Isoform_65158_11	chr3	+	175	1	Intergenic	novelGene_7392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAACCTTTC	NA	False	NA	NA	False	NA	NA	NA	159579996	159580171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_159580000_159580200
Isoform_65160_211	chr16	+	176	1	Intergenic	novelGene_4264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	3835652	3835828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_3835700_3835800
Isoform_65162_4	chr16	+	308	1	Intergenic	novelGene_4299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	11190925	11191233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_11190900_11191200
Isoform_65164_31	chr16	-	184	1	Intergenic	novelGene_4301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11416509	11416325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_11416300_11416500
Isoform_65165_3	chr16	-	2023	1	NIC	ENSMUSG00000065979.13	novel	2663	4	NA	NA	34	-23117	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	11727226	11725203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_11725200_11727200
Isoform_65166_10	chr16	-	184	1	Intergenic	novelGene_4302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12386062	12385878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_12385900_12386100
Isoform_65167_3	chr16	+	175	1	Intergenic	novelGene_4303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATATGTGACTA	NA	False	NA	NA	False	NA	NA	NA	12431381	12431556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_12431400_12431600
Isoform_65169_26	chr16	-	2483	1	Antisense	novelGene_ENSMUSG00000009569.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13212765	13210282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_13210300_13212800
Isoform_65170_18	chr16	+	2702	1	Intergenic	novelGene_4304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGATAAGCAAAATTCAT	NA	False	NA	NA	False	NA	NA	NA	13379600	13382302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_13379600_13382300
Isoform_65172_108	chr10	+	189	1	Intergenic	novelGene_1115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAGAAGCAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	89571514	89571703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_89571500_89571700
Isoform_65174_14	chr16	+	172	1	Intergenic	novelGene_4305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTCGT	NA	False	NA	NA	False	NA	NA	NA	13460254	13460426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_13460300_13460400
Isoform_65175_4	chr16	+	193	1	Intergenic	novelGene_4265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGGGTCACTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	3867989	3868182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_3868000_3868200
Isoform_65177_3	chr16	-	172	1	Intergenic	novelGene_4306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	2925	False	NA	NA	False	NA	NA	NA	13538324	13538152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_13538200_13538300
Isoform_65178_2667	chr16	-	168	1	Intergenic	novelGene_4307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2667	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTTTTAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	13544030	13543862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_13543900_13544000
Isoform_65180_3	chr16	-	2325	1	NIC	ENSMUSG00000022683.14	novel	1423	4	NA	NA	-3	-3247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGTAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	13548586	13546261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_13546300_13548600
Isoform_65182_8	chr16	+	159	1	Intergenic	novelGene_4308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	13557761	13557920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_13557800_13557900
Isoform_65183_8	chr13	-	176	1	Intergenic	novelGene_3219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGCAATTAA	NA	False	NA	NA	False	NA	NA	NA	82088421	82088245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_82088200_82088400
Isoform_65184_19	chr16	+	176	1	Intergenic	novelGene_4309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAGAAAACCAGAC	NA	False	NA	NA	False	NA	NA	NA	13562811	13562987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_13562800_13563000
Isoform_65187_3	chr16	+	2771	1	FSM	ENSMUSG00000118559.3	ENSMUST00000239037.2	3972	1	50	1151	50	-1151	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAAGCTTTGAATGCAT	NA	False	NA	NA	False	NA	NA	NA	13572479	13575250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_13572500_13575200
Isoform_65188_64	chr16	-	197	1	Intergenic	novelGene_4310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCTTATCTCAGTAC	NA	False	NA	2	True	NA	NA	NA	13581401	13581204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_13581200_13581400
Isoform_65189_80	chr16	+	178	1	Intergenic	novelGene_4311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	13583324	13583502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_13583300_13583500
Isoform_6519_3	chr10	+	8399	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-80	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	36.3191629477088	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGGATGTTACAGT	NA	False	NA	10	True	ATTAAA	-11	NA	66932103	67092094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
Isoform_65193_4	chr16	-	1685	1	Intergenic	novelGene_4312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13598519	13596834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_13596800_13598500
Isoform_6520_4	chr10	+	8213	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	23	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	36.3191629477088	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGATGTTACAGTTCTC	NA	False	NA	14	True	ATTAAA	-15	NA	66932293	67092098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
Isoform_65208_250	chr17	-	180	1	Intergenic	novelGene_5114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	70136101	70135921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_70135900_70136100
Isoform_6521_4	chr10	+	856	6	NIC	ENSMUSG00000037876.18	novel	3076	10	NA	NA	3	12	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	55.3404011550332	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGAAGTATTCGTCCAA	NA	False	NA	NA	False	AAAACA	-22	NA	66932273	67054147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_66932498_66993685_66993851_67051048_67051155_67052761_67052887_67053816_67053961_67054055
Isoform_65210_86	chr16	+	191	1	ISM	ENSMUSG00000022679.14	ENSMUST00000128757.8	3089	4	46007	261	8074	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8994	False	NA	NA	False	NA	NA	NA	13767031	13767222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_+_13767000_13767200
Isoform_65212_26	chr16	-	187	1	Intergenic	novelGene_4314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	13808979	13808792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_13808800_13809000
Isoform_65213_5	chr16	-	4365	1	ISM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	128300	5	2898	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGATGGTTCCGATTGG	5101	False	NA	-3	True	AATAAA	-22	NA	3903561	3899196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr16_-_3899200_3903600
Isoform_65214_5	chr16	-	166	1	Intergenic	novelGene_4315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAT	NA	False	NA	NA	False	NA	NA	NA	13915632	13915466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_13915500_13915600
Isoform_65216_6	chr16	-	273	1	Intergenic	novelGene_4316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTACTCTCACTTACCTTT	NA	False	NA	NA	False	NA	NA	NA	13949790	13949517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_13949500_13949800
Isoform_65218_4	chr16	+	1906	1	Antisense	novelGene_ENSMUSG00000060657.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13953966	13955872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_13954000_13955900
Isoform_65222_4	chr16	+	180	1	Intergenic	novelGene_4317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAATTAAATAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	13972516	13972696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_13972500_13972700
Isoform_65223_8	chr16	-	3752	1	NIC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	10	-14539	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9826	False	NA	NA	False	NA	NA	NA	13977121	13973369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_-_13973400_13977100
Isoform_65226_31	chr16	+	306	1	Intergenic	novelGene_4318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	13984682	13984988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_13984700_13985000
Isoform_65227_62	chr16	-	180	1	Intergenic	novelGene_4319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTTTTTAAAATTGC	NA	False	NA	NA	False	NA	NA	NA	14021694	14021514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_14021500_14021700
Isoform_65228_23	chr16	+	176	1	Antisense	novelGene_ENSMUSG00000022521.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGGAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	3904800	3904976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_3904800_3905000
Isoform_65229_5	chr16	-	173	1	Intergenic	novelGene_4320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	14140994	14140821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_14140800_14141000
Isoform_65232_16	chr16	-	182	1	Intergenic	novelGene_4322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTAAGACTATAACCC	NA	False	NA	NA	False	NA	NA	NA	14446775	14446593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_14446600_14446800
Isoform_65234_18	chr16	-	177	1	Intergenic	novelGene_4266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACACA	NA	False	NA	NA	False	NA	NA	NA	3914718	3914541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_3914500_3914700
Isoform_65235_34	chr16	+	177	1	Intergenic	novelGene_4323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	15336388	15336565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_15336400_15336600
Isoform_65237_17	chr8	+	174	1	Intergenic	novelGene_10543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22954676	22954850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_22954700_22954800
Isoform_65238_550	chr6	-	178	1	Intergenic	novelGene_9506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	550	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	91852017	91851839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_91851800_91852000
Isoform_65242_40	chr16	+	178	1	Intergenic	novelGene_4325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGTTGGGAT	NA	False	NA	NA	False	NA	NA	NA	15413957	15414135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_15414000_15414100
Isoform_65245_4	chr16	-	175	1	Intergenic	novelGene_4326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAACAATAA	NA	False	NA	NA	False	NA	NA	NA	15462584	15462409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_15462400_15462600
Isoform_65246_14	chr16	-	227	1	Intergenic	novelGene_4327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	15467647	15467420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_15467400_15467600
Isoform_65247_26	chr16	-	271	1	Intergenic	novelGene_4328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCACAGGTAAGTGTAGC	NA	False	NA	NA	False	NA	NA	NA	15477171	15476900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_15476900_15477200
Isoform_65250_18	chr16	+	1261	1	FSM	ENSMUSG00000071637.6	ENSMUST00000096232.6	3746	1	-80	2565	-80	-1515	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTTCCTATGTTCATT	NA	False	NA	8	True	AATAAA	-17	NA	15705069	15706330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_15705100_15706300
Isoform_65257_31	chr16	+	213	1	Intergenic	novelGene_4329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAACTAGATTTGCCAGA	NA	False	NA	NA	False	NA	NA	NA	16362758	16362971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_16362800_16363000
Isoform_65258_9	chr16	-	197	1	Intergenic	novelGene_4330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTATTG	NA	False	NA	NA	False	NA	NA	NA	16419203	16419006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_16419000_16419200
Isoform_65260_89	chr16	-	219	1	Genic_Genomic	ENSMUSG00000116729.2	novel	NA	NA	NA	NA	-186	-815	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGAAGTATACCCGGT	NA	False	NA	NA	False	AAAAAG	-14	NA	16667748	16667529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_-_16667500_16667700
Isoform_65263_11	chr16	+	1051	1	NIC	ENSMUSG00000022779.17	novel	1076	9	NA	NA	1	-7155	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAACCTCCATATTTA	NA	False	NA	NA	False	AATACA	-1	NA	16688645	16689696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_16688600_16689700
Isoform_65266_37	chr11	+	173	1	Intergenic	novelGene_2059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97115759	97115932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_97115800_97115900
Isoform_65271_115	chr16	-	175	1	Intergenic	novelGene_4331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16805883	16805708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_16805700_16805900
Isoform_6528_137	chr10	+	2474	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-17	-211	0	211	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATTTGTAATCTGCT	NA	False	NA	19	True	ATTAAA	-16	NA	67815527	67878339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_65288_32	chr16	+	175	1	Intergenic	novelGene_4332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATCTGCAAGCCGG	3965	False	NA	NA	False	NA	NA	NA	16874960	16875135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_16875000_16875100
Isoform_65289_4	chr16	-	269	1	Intergenic	novelGene_4333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCACAGTGAGT	NA	False	NA	NA	False	NA	NA	NA	16877838	16877569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_16877600_16877800
Isoform_6529_9	chr10	+	3812	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	1	-1567	1	1	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCTTCTGATTCCTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	67815545	67879695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_65292_4	chr16	+	168	1	Intergenic	novelGene_4334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGTGAAGAAACT	1904	False	NA	NA	False	NA	NA	NA	16898481	16898649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_16898500_16898600
Isoform_65293_76	chr16	+	178	1	Intergenic	novelGene_4335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAAGCA	NA	False	NA	NA	False	NA	NA	NA	16924489	16924667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_16924500_16924700
Isoform_65296_27	chr16	+	161	1	Intergenic	novelGene_4336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAGAAAATAAGAAGATAA	NA	False	NA	NA	False	NA	NA	NA	16933485	16933646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_16933500_16933600
Isoform_6530_11	chr10	+	2617	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-162	-209	-17	209	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGGAATTTGTAATCTG	NA	False	NA	17	True	ATTAAA	-14	NA	67815382	67878337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_65302_3	chr16	+	180	1	Intergenic	novelGene_4337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCCCAAAATCTGCCG	NA	False	NA	NA	False	NA	NA	NA	17012773	17012953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17012800_17013000
Isoform_65303_26	chr2	-	176	1	Intergenic	novelGene_6821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	170005372	170005196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_170005200_170005400
Isoform_6533_4	chr10	+	6368	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-59	-4063	-42	2493	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCTTGGTTCGTGGAGA	NA	False	NA	NA	False	ATTAAA	-17	NA	67815485	67882191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_65336_9	chr16	+	175	1	Intergenic	novelGene_4338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAAACTAAAT	NA	False	NA	NA	False	NA	NA	NA	17089279	17089454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17089300_17089500
Isoform_65338_32	chr16	+	173	1	Intergenic	novelGene_4339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTTAAAAAAATTCCT	NA	False	NA	NA	False	NA	NA	NA	17124818	17124991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17124800_17125000
Isoform_65339_20	chr16	+	175	1	Intergenic	novelGene_4340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAGAAATGC	5149	False	NA	NA	False	NA	NA	NA	17186790	17186965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17186800_17187000
Isoform_6534_4	chr10	+	2364	11	NIC	ENSMUSG00000037846.19	novel	2246	12	NA	NA	2	211	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	24.9887974900754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATTTGTAATCTGCT	NA	False	NA	19	True	ATTAAA	-16	NA	67815529	67878339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67877208
Isoform_65340_3	chr16	+	158	1	Intergenic	novelGene_4341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATAAATAT	1033	False	NA	NA	False	NA	NA	NA	17201978	17202136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17202000_17202100
Isoform_65345_12	chr16	+	176	1	Intergenic	novelGene_4342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	7944	False	NA	NA	False	NA	NA	NA	17284615	17284791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17284600_17284800
Isoform_65347_18	chr16	+	170	1	Intergenic	novelGene_4343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGCTGAA	NA	False	NA	NA	False	NA	NA	NA	17293481	17293651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17293500_17293700
Isoform_65348_7	chr16	-	620	1	Intergenic	novelGene_4344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTATTATTATAAT	NA	False	NA	NA	False	NA	NA	NA	17294974	17294354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_17294400_17295000
Isoform_6535_42	chr10	+	2491	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	126	1353	-2	217	multi-exon	FALSE	canonical	3	32	junction_2	17.4900207674628	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAATCTGCTATTCAA	NA	False	NA	25	True	ATTAAA	-22	NA	67815525	67878345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_65361_11	chr16	+	173	1	Intergenic	novelGene_4345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAGAGAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	17326112	17326285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17326100_17326300
Isoform_65362_7	chr16	-	253	1	Antisense	novelGene_ENSMUSG00000022761.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGCCCTCTCGTCCCA	4074	False	NA	NA	False	NA	NA	NA	17342897	17342644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_17342600_17342900
Isoform_65363_10	chr16	-	165	1	Intergenic	novelGene_4346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGGATTAAGAAGT	541	False	NA	NA	False	NA	NA	NA	17355645	17355480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_17355500_17355600
Isoform_65364_83	chr16	-	176	1	Intergenic	novelGene_4347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17356491	17356315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_17356300_17356500
Isoform_65366_14	chr1	-	175	1	Intergenic	novelGene_468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151271731	151271556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_151271600_151271700
Isoform_65367_18	chr16	+	176	1	Intergenic	novelGene_4349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAACCTTTTGCC	4580	False	NA	NA	False	NA	NA	NA	17410862	17411038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17410900_17411000
Isoform_65368_4	chr16	+	177	1	Intergenic	novelGene_4350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACAAATAAGGGAGC	3979	False	NA	NA	False	NA	NA	NA	17495406	17495583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17495400_17495600
Isoform_6537_3	chr10	+	3849	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	121	0	-7	0	multi-exon	FALSE	canonical	3	32	junction_2	17.4900207674628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTGATTCCTGGCAC	NA	False	NA	NA	False	ATTAAA	-18	NA	67815520	67879698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_65371_11	chr16	+	159	1	Intergenic	novelGene_4352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	17549031	17549190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17549000_17549200
Isoform_6538_3	chr10	+	2647	11	FSM	ENSMUSG00000019944.15	ENSMUST00000067908.14	4422	11	-22	1797	1	-15	multi-exon	FALSE	canonical	1	2	junction_2	2.33452350598575	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAACAAAATCC	NA	False	NA	NA	False	NA	NA	NA	69049001	69125813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_69049206_69051131_69051183_69084600_69084803_69085454_69085559_69102016_69102203_69105732_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
Isoform_65380_31	chr3	-	177	1	Intergenic	novelGene_6927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8006	False	NA	NA	False	NA	NA	NA	19257096	19256919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_19256900_19257100
Isoform_65381_3	chr16	+	1161	1	FSM	ENSMUSG00000103149.2	ENSMUST00000193194.2	1166	1	6	-1	6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAACTATGATTTGCCA	NA	False	NA	NA	False	ATTAAA	-17	NA	17739912	17741073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_17739900_17741100
Isoform_65388_5	chr16	-	4490	1	Intergenic	novelGene_4353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGATGCCTAAGAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	17753544	17749054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_17749100_17753500
Isoform_65389_55	chr16	+	172	1	Intergenic	novelGene_4354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTTTTAAAAAATCTAC	2001	False	NA	NA	False	NA	NA	NA	17765902	17766074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17765900_17766100
Isoform_65391_25	chr16	+	5243	1	Intergenic	novelGene_4356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCTGTTTCTTGTG	NA	False	NA	8	True	NA	NA	NA	17829607	17834850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_17829600_17834800
Isoform_65398_9	chr16	+	174	1	Intergenic	novelGene_4358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	18078584	18078758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18078600_18078800
Isoform_65399_8	chr16	+	220	1	Antisense	novelGene_ENSMUSG00000022718.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGAGGAACAAAAACCT	NA	False	NA	NA	False	AAAAAG	-19	NA	18082787	18083007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_+_18082800_18083000
Isoform_6540_4	chr10	+	3215	20	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	27.3196934640477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATGCAGATGTATATA	NA	False	NA	15	True	AATAAA	-20	NA	69761692	69851635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397
Isoform_65400_27	chr16	-	198	1	Intergenic	novelGene_4359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCCTTTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	18113208	18113010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18113000_18113200
Isoform_65401_3	chr16	-	341	1	Intergenic	novelGene_4360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18113730	18113389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18113400_18113700
Isoform_65403_47	chr16	+	156	1	Intergenic	novelGene_4361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTAGAAGAAGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	18115873	18116029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18115900_18116000
Isoform_65405_23	chr16	+	196	1	Intergenic	novelGene_4362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTGGCATTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	18162858	18163054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18162900_18163100
Isoform_65407_6	chr1	-	266	1	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAATATAGCTT	NA	False	NA	NA	False	AATAAA	-8	NA	36711376	36711110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_36711100_36711400
Isoform_65408_39	chr16	-	177	1	Intergenic	novelGene_4363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATCCATTTT	NA	False	NA	NA	False	NA	NA	NA	18258003	18257826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18257800_18258000
Isoform_65409_30	chr16	-	179	1	Intergenic	novelGene_4267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGCTGTGTGAGGC	NA	False	NA	NA	False	NA	NA	NA	4380170	4379991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_4380000_4380200
Isoform_6541_4	chr10	+	3873	21	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	25	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	26.6857171535636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69761673	69860452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
Isoform_65410_10	chr16	+	174	1	Intergenic	novelGene_4364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGAAGCGAGCGGGGCC	9923	False	NA	NA	False	NA	NA	NA	18258924	18259098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18258900_18259100
Isoform_65411_3	chr16	+	281	1	Intergenic	novelGene_4365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTGAGTGATCATG	9923	False	NA	NA	False	NA	NA	NA	18258924	18259205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18258900_18259200
Isoform_65412_84	chr16	-	190	1	Intergenic	novelGene_4366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	18263946	18263756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18263800_18263900
Isoform_65413_62	chr16	+	180	1	Intergenic	novelGene_4367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	18313084	18313264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18313100_18313300
Isoform_65414_9	chr16	-	1051	1	Intergenic	novelGene_4368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18322573	18321522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18321500_18322600
Isoform_65415_17	chr16	+	184	1	Intergenic	novelGene_4369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGCCATTAACCA	NA	False	NA	NA	False	NA	NA	NA	18329875	18330059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18329900_18330100
Isoform_65416_5	chr16	-	177	1	Intergenic	novelGene_4268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	4385636	4385459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_4385500_4385600
Isoform_65421_13	chr16	-	177	1	Intergenic	novelGene_4371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATTTTTTATTTTGTC	NA	False	NA	NA	False	NA	NA	NA	18507283	18507106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18507100_18507300
Isoform_65422_175	chr18	-	181	1	Intergenic	novelGene_5244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	3384823	3384642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_3384600_3384800
Isoform_65423_4	chr16	+	176	1	Intergenic	novelGene_4372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTTTTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	18537707	18537883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18537700_18537900
Isoform_65424_14	chr16	+	1413	1	FSM	ENSMUSG00000041378.3	ENSMUST00000043577.3	1416	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTCCTGTCCTCTGTC	NA	False	NA	NA	False	AGTAAA	-18	NA	18595598	18597011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_18595600_18597000
Isoform_65425_59	chr16	-	220	1	Intergenic	novelGene_4373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATATATATATATT	NA	False	NA	NA	False	AATAAA	-28	NA	18606503	18606283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18606300_18606500
Isoform_65427_3	chr16	+	1125	1	NIC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	0	318	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTAGGCTTCTATATA	NA	False	NA	NA	False	NA	NA	NA	18655330	18656455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_18655300_18656500
Isoform_65431_49	chr16	-	175	1	Intergenic	novelGene_4376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATACA	NA	False	NA	NA	False	NA	NA	NA	18665995	18665820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18665800_18666000
Isoform_65432_4	chr16	+	165	1	Intergenic	novelGene_4269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAGGA	NA	False	NA	NA	False	NA	NA	NA	4399021	4399186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_4399000_4399200
Isoform_65433_61	chr16	-	181	1	Intergenic	novelGene_4377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGATTCCTGT	NA	False	NA	NA	False	NA	NA	NA	18667272	18667091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18667100_18667300
Isoform_65434_40	chr16	-	176	1	Intergenic	novelGene_4378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTCTGTGCCAA	NA	False	NA	NA	False	NA	NA	NA	18667519	18667343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18667300_18667500
Isoform_65439_3	chr16	-	185	1	Intergenic	novelGene_4379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATGGGATGAGGT	NA	False	NA	NA	False	NA	NA	NA	18756779	18756594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_18756600_18756800
Isoform_6544_3	chr10	+	3694	16	NIC	ENSMUSG00000069601.15	novel	3825	19	NA	NA	27	1037	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	24.3191739625799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTATTGTAGCGCAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	69761675	69836570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69817992_69830201_69830277_69833924_69834057_69835184
Isoform_65440_12	chr16	-	230	1	Intergenic	novelGene_4270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACCAGCACTTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	4402992	4402762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_4402800_4403000
Isoform_65443_6	chr16	-	4521	1	Antisense	novelGene_ENSMUSG00000022686.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19587200	19582679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_19582700_19587200
Isoform_65449_16	chr16	+	203	1	Intergenic	novelGene_4381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATATTTGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19914279	19914482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_19914300_19914500
Isoform_65450_20	chr16	+	2101	1	FSM	ENSMUSG00000062901.4	ENSMUST00000231740.2	2109	1	9	-1	-2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATTTCATTT	NA	False	NA	NA	False	AATAAA	-24	NA	19916332	19918433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_+_19916300_19918400
Isoform_65451_71	chr16	+	172	1	Intergenic	novelGene_4382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATTCCGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	19919168	19919340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_19919200_19919300
Isoform_65452_13	chr5	+	177	1	Intergenic	novelGene_8772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	113973553	113973730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_113973600_113973700
Isoform_65457_3	chr16	+	214	1	Intergenic	novelGene_4383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATTTTTTTAAATATAA	NA	False	NA	NA	False	NA	NA	NA	20006609	20006823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20006600_20006800
Isoform_65458_140	chr16	+	179	1	Genic_Genomic	ENSMUSG00000041215.17	novel	NA	NA	NA	NA	-1987	1	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20009728	20009907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr16_+_20009700_20009900
Isoform_6546_3	chr10	+	3695	16	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	89	15052	-60	1050	5prime_fragment	FALSE	canonical	3	68	junction_4	11.2853887837327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCAATGTTGTGTGGTTCC	NA	False	NA	NA	False	ATTAAA	-31	NA	69761723	69836583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184
Isoform_65462_35	chr16	+	177	1	Intergenic	novelGene_4384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTCAGTTAA	2813	False	NA	NA	False	NA	NA	NA	20115323	20115500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20115300_20115500
Isoform_65465_8	chr16	+	176	1	Intergenic	novelGene_4385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	2544	False	NA	NA	False	NA	NA	NA	20126373	20126549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20126400_20126500
Isoform_65469_15	chr16	+	187	1	Intergenic	novelGene_4386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACACAACTTAAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	20165111	20165298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20165100_20165300
Isoform_65470_332	chr2	-	176	1	Intergenic	novelGene_6744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	164708286	164708110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_164708100_164708300
Isoform_65472_4	chr16	+	171	1	Intergenic	novelGene_4387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTAAGACCCT	NA	False	NA	NA	False	NA	NA	NA	20242620	20242791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20242600_20242800
Isoform_65474_10	chr16	+	208	1	Intergenic	novelGene_4390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTGCAATCCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	20278760	20278968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20278800_20279000
Isoform_65475_6	chr16	+	175	1	Intergenic	novelGene_4391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAGAACTACTA	NA	False	NA	NA	False	NA	NA	NA	20292421	20292596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20292400_20292600
Isoform_65476_8	chr16	-	170	1	Intergenic	novelGene_4392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAATGAATTAA	3559	False	NA	NA	False	NA	NA	NA	20298820	20298650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_20298600_20298800
Isoform_65482_53	chr16	-	179	1	Intergenic	novelGene_4393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	5225	False	NA	NA	False	NA	NA	NA	20333453	20333274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_20333300_20333500
Isoform_65484_5	chr16	-	1045	1	FSM	ENSMUSG00000080797.3	ENSMUST00000231978.2	3245	1	2	2198	2	-1492	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCAAGG	4967	False	NA	NA	False	NA	NA	NA	20367204	20366159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20366200_20367200
Isoform_65485_9	chr16	-	169	1	Intergenic	novelGene_4394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGAATTAAAAATA	7745	False	NA	NA	False	NA	NA	NA	20418648	20418479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_20418500_20418600
Isoform_65486_7	chr16	+	615	1	NIC	ENSMUSG00000115219.3	novel	1134	3	NA	NA	0	-6662	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAACACCTAGTTTTCTT	5899	False	NA	NA	False	AGTAAA	-16	NA	20430342	20430957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_20430300_20431000
Isoform_65487_27	chr16	+	175	1	Intergenic	novelGene_4395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAGAGCAAGCAGAGGT	9279	False	NA	NA	False	NA	NA	NA	20433722	20433897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20433700_20433900
Isoform_65490_3	chr16	+	172	1	Intergenic	novelGene_4396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	20459850	20460022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20459800_20460000
Isoform_65492_4	chr16	-	160	1	Antisense	novelGene_ENSMUSG00000006998.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTTTTTCAAAGATCATA	NA	False	NA	NA	False	AAAACA	-33	NA	20482163	20482003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr16_-_20482000_20482200
Isoform_65493_10	chr16	+	301	1	Intergenic	novelGene_4397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACACAGATGTT	NA	False	NA	NA	False	NA	NA	NA	20488172	20488473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20488200_20488500
Isoform_65497_39	chr16	-	178	1	Intergenic	novelGene_4398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	20594971	20594793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_20594800_20595000
Isoform_65498_13	chr16	-	177	1	Intergenic	novelGene_4399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAACAAGGTATAACT	NA	False	NA	NA	False	NA	NA	NA	20631624	20631447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_20631400_20631600
Isoform_65502_4	chr16	-	795	1	FSM	ENSMUSG00000099764.2	ENSMUST00000127484.2	496	1	-246	-53	-246	53	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTGCCTTGGTCATG	NA	False	NA	NA	False	AATAAA	-24	NA	20641636	20640841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_20640800_20641600
Isoform_65503_7	chr16	-	192	1	Intergenic	novelGene_4400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	4968	False	NA	NA	False	AATAAA	-25	NA	20729561	20729369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_20729400_20729600
Isoform_65505_14	chr16	-	177	1	Intergenic	novelGene_4401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	20745594	20745417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_20745400_20745600
Isoform_65507_105	chr16	+	202	1	Intergenic	novelGene_4402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTATATTTTCCAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	20982590	20982792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_20982600_20982800
Isoform_65508_6	chr16	-	171	1	Intergenic	novelGene_4403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTATG	NA	False	NA	NA	False	NA	NA	NA	21008574	21008403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_21008400_21008600
Isoform_65509_3	chr16	+	182	1	Intergenic	novelGene_4404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGGGGCAGGGGAAG	NA	False	NA	NA	False	NA	NA	NA	21010864	21011046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21010900_21011000
Isoform_65512_25	chr16	-	1455	1	FSM	ENSMUSG00000116632.2	ENSMUST00000231504.2	1455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTTGCACAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	21152106	21150651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr16_-_21150700_21152100
Isoform_65514_8	chr16	-	175	1	Intergenic	novelGene_4405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGAGTGAGCAGGCTT	NA	False	NA	NA	False	NA	NA	NA	21191497	21191322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_21191300_21191500
Isoform_65516_9	chr16	+	3114	1	NIC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	15	-8676	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	21241933	21245047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr16_+_21241900_21245000
Isoform_65521_32	chr16	+	218	1	Intergenic	novelGene_4406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGGAGAATAACCATG	NA	False	NA	NA	False	NA	NA	NA	21504510	21504728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_21504500_21504700
Isoform_65522_5	chr17	-	1205	4	FSM	ENSMUSG00000116995.2	ENSMUST00000232087.2	1210	4	6	-1	6	1	multi-exon	FALSE	canonical	2	4	junction_1	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCACC	NA	False	NA	NA	False	NA	NA	NA	3165064	3162063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_3162848_3163562_3163623_3164462_3164621_3164861
Isoform_65523_4	chr17	-	1228	4	FSM	ENSMUSG00000116995.2	ENSMUST00000232087.2	1210	4	-19	1	-19	-1	multi-exon	FALSE	canonical	2	4	junction_1	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	3165089	3162065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_3162848_3163562_3163623_3164462_3164621_3164861
Isoform_65524_13	chr17	-	3035	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	26	-1659	-1	1659	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTTGTAATCTGGAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	3608030	3567871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
Isoform_65525_134	chr17	-	1394	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	26	-18	-1	18	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGCCCAAAGGACT	NA	False	NA	NA	False	AATAAA	-34	NA	3608030	3569512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
Isoform_65527_4	chr17	-	1823	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	-7	-414	-7	414	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTTTTGTGGAAAAAATA	NA	False	NA	NA	False	AATAAA	-22	NA	3608063	3569116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
Isoform_65529_3	chr17	-	1239	6	NIC	ENSMUSG00000036983.8	novel	1402	7	NA	NA	-1	15	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	33.0611554547024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGAAAATGCCCAAAGG	NA	False	NA	NA	False	AATAAA	-31	NA	3608030	3569515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_3570071_3571919_3572048_3586352_3586473_3595857_3595967_3605206_3605359_3607855
Isoform_6553_11	chr10	+	5197	20	FSM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	301	-426	14	426	multi-exon	FALSE	canonical	3	43	junction_16	15.2197204046814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGTTCCACAGTGTTC	NA	False	NA	35	True	AATAAA	-21	NA	69761662	69861210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
Isoform_65530_539	chr17	-	944	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	5	-1	5	1	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGCGTGTGTGTCTGT	3473	False	NA	-7	True	NA	NA	NA	5490513	5461143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
Isoform_65534_10	chr17	-	589	3	FSM	ENSMUSG00000004945.16	ENSMUST00000185896.2	780	3	18	173	5	-173	multi-exon	FALSE	canonical	3	677	junction_2	16.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGTATATTGCTTG	3473	False	NA	NA	False	AATAAA	-15	NA	5490513	5483472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_5483855_5489806_5489908_5490407
Isoform_65535_8	chr17	-	650	3	FSM	ENSMUSG00000004945.16	ENSMUST00000185896.2	780	3	20	110	7	-110	multi-exon	FALSE	canonical	3	677	junction_2	16.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATGTGTTAGATACAC	3475	False	NA	NA	False	AATAAA	-24	NA	5490511	5483409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_5483855_5489806_5489908_5490407
Isoform_65536_59	chr17	-	2116	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	31	1860	17	10	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTAAGGTCTCCGC	2624	False	NA	-9	True	AATATA	-25	NA	6129985	6094330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_65537_43	chr17	-	5618	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	14	-1625	0	1625	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	2607	False	NA	-12	True	NA	NA	NA	6130002	6090845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_6554_4	chr10	+	3803	19	FSM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	28	-6	14	6	multi-exon	FALSE	canonical	3	13	junction_18	22.7009544586419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGATGTATATATGTATA	NA	False	NA	21	True	AATAAA	-26	NA	69761662	69851641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851400
Isoform_65540_8	chr17	-	2052	16	FSM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	-13	-6	1	6	multi-exon	FALSE	canonical	3	21	junction_12	20.0614611188274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTGTTGTTAAGGTCT	2594	False	NA	-13	True	AATATA	-21	NA	6130015	6094334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_65541_5	chr17	-	5527	16	FSM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	0	-3494	0	1624	multi-exon	FALSE	canonical	3	21	junction_12	20.0614611188274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTGTTCAATTCTT	2607	False	NA	-13	True	NA	NA	NA	6130002	6090846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_65542_14	chr17	-	2006	16	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	9	6	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	22.4376667434225	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTGTTGTTAAGGTCT	2616	False	NA	-13	True	AATATA	-21	NA	6129993	6094334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_65543_8	chr17	-	5516	16	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	1	1624	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	22.4376667434225	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTGTTCAATTCTT	2594	False	NA	-13	True	NA	NA	NA	6130015	6090846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_65545_10	chr17	-	3929	8	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	24	19662	10	3091	5prime_fragment	FALSE	canonical	3	78	junction_3	11.8545608204141	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAAGATGGCAGACTTG	2617	False	NA	NA	False	AATAAA	-26	NA	6129992	6112132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_65546_8	chr17	-	4147	8	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	0	19468	0	3285	5prime_fragment	FALSE	canonical	3	78	junction_3	11.8545608204141	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGGACTGTGGTGTTTT	2593	False	NA	NA	False	TATAAA	-18	NA	6130016	6111938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_65551_171	chr17	-	697	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	66	2558	-16	-2558	multi-exon	TRUE	canonical	3	2579	junction_4	2048.76394138027	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6367709	6360826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
Isoform_65553_185	chr17	-	697	5	NNC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-392799	-2558	at_least_one_novel_splicesite	FALSE	canonical	3	556	junction_4	2859.46642750007	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6760574	6360826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6760513
Isoform_65554_6	chr17	-	780	5	Fusion	ENSMUSG00000092074.3_ENSMUSG00000118494.2	novel	3321	5	NA	NA	143	-2558	multi-exon	FALSE	canonical	3	145	junction_4	3028.61844534765	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6371868	6360826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6371724
Isoform_6556_3	chr10	+	3535	18	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-70	19040	65	879	5prime_fragment	FALSE	canonical	3	64	junction_16	12.4850083110085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGAGTTGTTTCGGCTTT	NA	False	NA	NA	False	AATGAA	-10	NA	69761713	69841433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439
Isoform_65562_35	chr17	-	834	2	NNC	ENSMUSG00000092074.3	novel	3541	4	NA	NA	-392799	-6192	at_least_one_novel_splicesite	FALSE	canonical	3	556	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	6760574	6364460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6365234_6760513
Isoform_65565_6	chr17	-	1876	17	NNC	ENSMUSG00000096780.8	novel	2426	9	NA	NA	-10119	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	300.210804841781	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	2349	False	NA	-2	True	AATAAA	-45	NA	6744540	6705926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6706243_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
Isoform_65566_4	chr17	-	811	7	NNC	ENSMUSG00000096780.8	novel	2426	9	NA	NA	3031	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	418.960883880849	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	0	True	AATAAA	-21	NA	6713463	6705924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6706243_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6713365
Isoform_65568_5	chr17	-	3951	11	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-2268	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	340.009411634443	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGACTTTTTGTTGCT	NA	False	NA	-1	True	AATAAA	-20	NA	6719412	6705925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286
Isoform_6557_27	chr10	+	3214	19	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-119	8834	16	4	5prime_fragment	FALSE	canonical	3	64	junction_16	12.9177120246047	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAGATGTATATATGTA	NA	False	NA	19	True	AATAAA	-24	NA	69761664	69851639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397
Isoform_65570_13	chr17	-	4513	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10119	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	290.843486421391	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	2349	False	NA	0	True	AATAAA	-21	NA	6744540	6705924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
Isoform_65575_5	chr17	-	3453	7	NNC	ENSMUSG00000096780.8	novel	1859	9	NA	NA	3026	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	406.231871390384	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACTTTTTGTTGCTGTG	NA	False	NA	2	True	AATAAA	-23	NA	6713468	6705922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6713365
Isoform_65576_8	chr17	+	4304	9	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6707507	6718369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716015_6716180_6716313_6716836
Isoform_65577_98	chr17	-	1092	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10119	-15008	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCGTGTTTCTTTTCCC	2349	False	NA	NA	False	AATAAA	-14	NA	6744540	6723808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
Isoform_65589_997	chr17	-	697	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	66	8	-16	-8	multi-exon	TRUE	canonical	3	5415	junction_4	1216.82506959711	997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6923233	6916344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
Isoform_6560_3	chr10	+	3609	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-141	283	-6	-87	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATAGTTTTGCTGTAAA	NA	False	NA	NA	False	NA	NA	NA	69761642	69860190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
Isoform_6561_27	chr10	+	4578	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-89	-738	46	427	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTTCCACAGTGTTCT	NA	False	NA	36	True	AATAAA	-22	NA	69761694	69861211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
Isoform_65636_1752	chr17	-	2895	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	31	238	31	-238	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTGTGTCTGATTGCA	NA	False	NA	-5	True	AATAAA	-10	NA	7050152	7005677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
Isoform_65638_359	chr17	-	2922	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	4	238	4	-238	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTGTGTCTGATTGCA	NA	False	NA	-5	True	AATAAA	-10	NA	7050179	7005677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
Isoform_65639_2112	chr17	-	2564	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	31	569	31	-569	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	2112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCATGTAACCGAGACA	NA	False	NA	-10	True	AATAAA	-15	NA	7050152	7006008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
Isoform_65642_369	chr17	-	2591	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	4	569	4	-569	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCATGTAACCGAGACA	NA	False	NA	-10	True	AATAAA	-15	NA	7050179	7006008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
Isoform_6566_5	chr10	+	3816	20	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	46	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_18	20.5534233960282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69761694	69860452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851400_69851484_69859661
Isoform_65665_10	chr17	-	1628	8	FSM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	-60	46	-60	-46	multi-exon	FALSE	canonical	2	7	junction_1	24.1119836409624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAATAAAATAAAA	NA	False	NA	NA	False	ACTAAA	-35	NA	7215815	7172160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
Isoform_65666_12	chr17	-	1561	8	FSM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	7	46	7	-46	multi-exon	TRUE	canonical	2	7	junction_1	24.1119836409624	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAATAAAATAAAA	NA	False	NA	NA	False	ACTAAA	-35	NA	7215748	7172160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
Isoform_65668_7	chr17	-	1931	8	FSM	ENSMUSG00000023806.11	ENSMUST00000231794.2	2243	8	-37	349	-37	-46	multi-exon	FALSE	canonical	2	7	junction_1	24.1119836409624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAATAAAATAAAA	NA	False	NA	NA	False	ACTAAA	-35	NA	7216118	7172160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
Isoform_65669_16	chr17	-	2608	3	ISM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	-47	-12	-47	12	intron_retention	FALSE	canonical	3	411	junction_2	60	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTCAGCCAGTGTCTGT	NA	False	NA	-7	True	AATAAA	-31	NA	7228602	7222397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_7224424_7225052_7225168_7228135
Isoform_65670_27	chr17	-	2540	3	ISM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	-47	56	-47	-56	intron_retention	FALSE	canonical	3	411	junction_2	60	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTGCCGATGTTATA	NA	False	NA	-75	True	AATAAA	-24	NA	7228602	7222465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_7224424_7225052_7225168_7228135
Isoform_65671_31	chr17	-	2483	3	ISM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	12	54	12	-54	intron_retention	FALSE	canonical	3	411	junction_2	60	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGCCGATGTTATATC	NA	False	NA	-73	True	AATAAA	-26	NA	7228543	7222463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_7224424_7225052_7225168_7228135
Isoform_65672_27	chr17	-	2541	3	ISM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	12	-4	12	4	intron_retention	FALSE	canonical	3	411	junction_2	60	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTGTTCCATTCAGCCA	NA	False	NA	-15	True	AATAAA	-23	NA	7228543	7222405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_7224424_7225052_7225168_7228135
Isoform_65673_103	chr17	-	2257	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	-1	56	-1	-56	multi-exon	FALSE	non_canonical	0	0	junction_3	227.371941980535	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTGCCGATGTTATA	NA	False	NA	-75	True	AATAAA	-24	NA	7228556	7222465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
Isoform_65675_43	chr17	-	2303	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	-47	56	-47	-56	multi-exon	FALSE	non_canonical	0	0	junction_3	227.371941980535	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTGCCGATGTTATA	NA	False	NA	-75	True	AATAAA	-24	NA	7228602	7222465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
Isoform_65676_10	chr17	-	2361	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	-32	-17	-32	17	multi-exon	FALSE	non_canonical	0	0	junction_3	227.371941980535	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGTGTCTGTTCACT	NA	False	NA	-2	True	AATAAA	-36	NA	7228587	7222392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
Isoform_65677_30	chr17	-	2305	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	12	-5	12	5	multi-exon	FALSE	non_canonical	0	0	junction_3	227.371941980535	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTTCCATTCAGCCAG	NA	False	NA	-14	True	AATAAA	-24	NA	7228543	7222404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
Isoform_65678_507	chr17	-	962	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	310	521	-2	-521	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTTGGCTTTTTCT	NA	False	NA	-7	True	AAAAAG	-8	NA	8366619	8347428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
Isoform_65679_126	chr17	-	989	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	283	521	-29	-521	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTTGGCTTTTTCT	NA	False	NA	-7	True	AAAAAG	-8	NA	8366646	8347428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
Isoform_65683_9	chr17	-	905	8	NIC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	-3	-521	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	257.416124639638	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTTGGCTTTTTCT	NA	False	NA	-7	True	AAAAAG	-8	NA	8366620	8347428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8361349_8361403_8364373_8364435_8366425
Isoform_65685_8	chr17	-	1013	10	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	-2	-514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	333.963441482617	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTTTTCTTGTGTGT	NA	False	NA	0	True	AAAAAG	-15	NA	8366619	8347421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_8347719_8349056_8349132_8349468_8349513_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
Isoform_6569_8	chr10	+	5790	9	FSM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	-280	1	-280	-1	multi-exon	TRUE	canonical	3	18	junction_3	4.1514304763539	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTGGAACTGTCAAATT	6689	False	NA	8	True	AATAAA	-19	NA	69932670	70029029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
Isoform_65705_1536	chr17	-	4559	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	37	3951	18	-1	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGACTATGTTTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	10538272	10425480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
Isoform_6571_8	chr10	+	5713	9	FSM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	-202	0	-202	0	multi-exon	FALSE	canonical	3	18	junction_3	4.1514304763539	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGGAACTGTCAAATTT	6767	False	NA	9	True	AATAAA	-20	NA	69932748	70029030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
Isoform_65711_31	chr17	-	7221	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	37	1289	18	-1289	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCATCTTCTCAAGC	NA	False	NA	0	True	AATAAA	-17	NA	10538272	10422818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
Isoform_65726_399	chr17	-	5371	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	60	-3	60	3	multi-exon	FALSE	canonical	3	312	junction_1	334.742396810177	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAACTTTGTTTGGCCC	NA	False	NA	NA	False	AATAAA	-14	NA	10538230	10429114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
Isoform_65746_231	chr17	-	5410	27	FSM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	23	8	13	-8	multi-exon	FALSE	canonical	2	131	junction_25	36.3765644044325	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGAAGTCAGCGTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	12537660	12446515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
Isoform_6575_4	chr10	+	2816	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	110	830	110	-830	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTTTCAAGTTTGGTA	NA	False	NA	NA	False	AATAAA	-24	NA	70081039	70120968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
Isoform_65750_77	chr17	-	5265	26	FSM	ENSMUSG00000014426.10	ENSMUST00000233755.2	5237	26	-29	1	9	-1	multi-exon	FALSE	canonical	2	41	junction_10	48.1782357501808	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGCGTCTGTTACTGGC	NA	False	NA	0	True	AATAAA	-22	NA	12537664	12446508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
Isoform_65753_9	chr17	-	5182	16	ISM	ENSMUSG00000014426.10	ENSMUST00000233755.2	5237	26	-55	14357	-7	7219	5prime_fragment	FALSE	canonical	2	131	junction_14	34.8237466871865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTGCTTGTTTTGGGT	NA	False	NA	NA	False	AATAAA	-20	NA	12537690	12460864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
Isoform_6577_87	chr10	+	3544	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	212	0	212	0	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTTCGTCAATA	NA	False	NA	22	True	AATAAA	-30	NA	70081141	70121798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
Isoform_65799_146	chr17	-	8923	48	FSM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	-43	7	-43	-7	multi-exon	TRUE	canonical	3	127	junction_32	38.5858675109275	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGGTGTAAGTGACTCA	5575	False	NA	-7	True	AATAAA	-12	NA	12988594	12901299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
Isoform_65801_4	chr17	-	1771	19	NIC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.3170793704637	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTACATGGCCAGTGCA	2986	False	NA	-7	True	GATAAA	-21	NA	13128821	13107614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_13107857_13108962_13109062_13109165_13109316_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
Isoform_65802_179	chr17	-	1802	19	FSM	ENSMUSG00000073460.6	ENSMUST00000163394.3	2092	19	297	-7	13	7	multi-exon	TRUE	canonical	3	109	junction_10	13.5984067694222	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCCAGTGCATTCCTT	2987	False	NA	-1	True	GATAAA	-27	NA	13128820	13107608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
Isoform_65806_5	chr17	-	1779	19	NIC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	31.2750146796109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	3006	False	NA	-8	True	GATAAA	-20	NA	13128801	13107615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116221_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
Isoform_65807_4	chr17	-	1974	19	NNC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	31.8964857385439	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2966	False	NA	-8	True	GATAAA	-20	NA	13128841	13107615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113461_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
Isoform_65808_8	chr17	-	1045	3	ISM	ENSMUSG00000073460.6	ENSMUST00000232982.2	620	8	-46	8117	7	-8117	5prime_fragment	FALSE	canonical	3	130	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	2981	False	NA	NA	False	NA	NA	NA	13128826	13127130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_13128014_13128348_13128407_13128722
Isoform_65811_407	chr17	-	972	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	250	-3	8	3	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTACTGTGTTGTGCTC	NA	False	NA	-6	True	ATTAAA	-21	NA	13134982	13130232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
Isoform_65827_754	chr17	-	2175	8	FSM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	28	-403	28	-2	multi-exon	FALSE	canonical	3	922	junction_2	94.6542580734146	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCTTGTCAGTGAG	NA	False	NA	-2	True	NA	NA	NA	13179230	13161926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881
Isoform_6583_14	chr10	+	3607	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	145	4	145	-4	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAAGTCTTGTTTTCGTC	NA	False	NA	18	True	AATAAA	-26	NA	70081074	70121794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
Isoform_65833_301	chr17	-	2106	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	-6	150	-6	-2	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCTTGTCAGTGAG	NA	False	NA	-2	True	NA	NA	NA	13179640	13161926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
Isoform_65834_3359	chr17	-	2065	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	35	150	8	-2	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	3359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCTTGTCAGTGAG	NA	False	NA	-2	True	NA	NA	NA	13179599	13161926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
Isoform_65846_105	chr17	-	2035	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	16	0	16	0	multi-exon	FALSE	canonical	3	178	junction_3	195.055094257798	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211130	13185685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_65847_165	chr17	-	2001	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	50	0	-17	0	multi-exon	FALSE	canonical	3	178	junction_3	195.055094257798	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211096	13185685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_65848_21	chr17	-	2152	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	-95	3	-46	0	multi-exon	FALSE	canonical	3	121	junction_7	218.990354833733	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211479	13185685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
Isoform_65849_105	chr17	-	2083	9	NNC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	241.068843901488	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211430	13185685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_13186194_13186213_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
Isoform_6585_4	chr10	+	3456	5	NIC	ENSMUSG00000037762.7	novel	3756	6	NA	NA	190	-14	intron_retention	FALSE	canonical	1	8	junction_3	30.9546038579078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGTATTCCAAGTCT	NA	False	NA	8	True	AATAAA	-16	NA	70081119	70121784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_70081209_70091789_70092023_70102921_70103066_70118118_70119028_70119703
Isoform_65851_15	chr17	-	1974	8	NIC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	239.599069876563	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13213055	13185685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13212949
Isoform_65852_36	chr17	-	3576	9	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	-26	0	intron_retention	TRUE	non_canonical	0	0	junction_1	250.614214231755	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211105	13185685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_13186194_13186213_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_65854_18	chr17	-	3689	8	NNC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	65	junction_2	238.239889392938	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211430	13185685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
Isoform_65857_132	chr17	-	1652	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-50	1585	17	-718	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGGGTTTTTTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	13211129	13193156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_65858_176	chr17	-	1619	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-17	1585	-17	-718	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGGGTTTTTTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	13211096	13193156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_6586_3	chr10	+	3262	15	FSM	ENSMUSG00000043259.16	ENSMUST00000105436.9	3380	15	120	-2	-44	0	multi-exon	FALSE	canonical	3	12	junction_12	8.58332507759989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTATGTTGAAAGCAC	9806	False	NA	NA	False	AATAAA	-16	NA	70276617	70394561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
Isoform_65860_17	chr17	-	3199	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-14	2	-14	-2	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTGTGATTCCTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	13211093	13191573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_65862_69	chr17	-	1768	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	-44	718	-44	-718	multi-exon	FALSE	canonical	3	121	junction_5	236.32384560175	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGGGTTTTTTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	13211477	13193156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
Isoform_65863_16	chr17	-	1806	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	-85	721	-85	-721	multi-exon	FALSE	canonical	3	121	junction_5	236.32384560175	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATAGTTGGGTTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	13211518	13193159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
Isoform_65868_3	chr17	-	1927	3	NNC	ENSMUSG00000117063.2	novel	2047	5	NA	NA	261017	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTTCCAGACTTCTT	NA	False	NA	NA	False	NA	NA	NA	13720623	13709532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_13711102_13716878_13717048_13720434
Isoform_65869_170	chr17	-	2750	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	322	178	322	-178	multi-exon	FALSE	canonical	3	62	junction_2	0.816496580927726	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTTGTCTCTTCC	NA	False	NA	-3	True	AATAAA	-25	NA	14424034	14415491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
Isoform_6587_17	chr10	+	3193	15	FSM	ENSMUSG00000043259.16	ENSMUST00000105436.9	3380	15	190	-3	-22	1	multi-exon	FALSE	canonical	3	12	junction_12	8.58332507759989	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATGTTGAAAGCACA	9876	False	NA	NA	False	AATAAA	-17	NA	70276687	70394562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
Isoform_65870_10	chr17	-	2780	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	292	178	292	-178	multi-exon	FALSE	canonical	3	62	junction_2	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTTGTCTCTTCC	NA	False	NA	-3	True	AATAAA	-25	NA	14424064	14415491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
Isoform_65873_318	chr17	-	1681	12	FSM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-5	-13	-5	13	multi-exon	FALSE	canonical	3	756	junction_1	72.874056420468	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAAGTTGATTTATTT	NA	False	NA	-6	True	AATAAA	-29	NA	15181540	15165257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
Isoform_65875_156	chr17	-	1992	12	FSM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-324	-5	-324	5	multi-exon	FALSE	canonical	3	756	junction_1	72.874056420468	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTTAAACATCAAGTTG	NA	False	NA	-14	True	AATAAA	-21	NA	15181859	15165265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
Isoform_65876_30	chr17	-	2005	12	FSM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-346	4	-346	1	multi-exon	FALSE	canonical	3	756	junction_1	72.874056420468	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACGATGACCTTAAAC	NA	False	NA	-23	True	AATAAA	-12	NA	15181881	15165274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
Isoform_65881_132	chr17	-	1671	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_9	206.573981704752	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181549	15165270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
Isoform_65883_23	chr17	-	2007	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-339	11	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_9	206.573981704752	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACATCAAGTTGATTTAT	NA	False	NA	-8	True	AATAAA	-27	NA	15181874	15165259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
Isoform_6589_5	chr10	+	3384	15	NIC	ENSMUSG00000043259.16	novel	3380	15	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	7.71329358699535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATGTTGAAAGCACA	9682	False	NA	NA	False	AATAAA	-17	NA	70276493	70394562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
Isoform_65890_126	chr17	-	4029	9	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-17	2728	-17	1	5prime_fragment	FALSE	canonical	3	797	junction_6	66.6966078597705	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTCATCTTTTGC	NA	False	NA	-1	True	AATAAA	-21	NA	15181552	15167998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
Isoform_65893_15	chr17	-	4344	9	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-333	2729	-333	0	5prime_fragment	FALSE	canonical	3	797	junction_6	66.6966078597705	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCTGTCATCTTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	15181868	15167999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
Isoform_65895_35	chr17	-	4009	9	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_6	238.494758852265	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCTCTGTCATCTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	15181540	15168000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
Isoform_65897_12	chr17	-	4326	9	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-321	0	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_6	238.494758852265	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCTGTCATCTTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	15181856	15167999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
Isoform_65898_4	chr17	-	760	4	FSM	ENSMUSG00000079710.11	ENSMUST00000179539.9	752	4	21	-29	8	0	multi-exon	TRUE	canonical	3	14	junction_1	7.25718035235908	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGCCTCGTGTTAC	8886	False	NA	NA	False	AATAAA	-13	NA	15230423	15216048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_15216212_15219403_15219560_15222241_15222449_15230189
Isoform_65899_16	chr17	-	1187	5	FSM	ENSMUSG00000097624.3	ENSMUST00000181658.2	1179	5	0	-8	0	4	multi-exon	FALSE	canonical	3	33	junction_2	9.14808723176599	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCTTTCTTTCT	NA	False	NA	0	True	GATAAA	-20	NA	15461045	15451838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_15452674_15453041_15453145_15454190_15454265_15460531_15460624_15460962
Isoform_6590_8	chr10	+	3235	15	NIC	ENSMUSG00000043259.16	novel	3380	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	7.71329358699535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGTTGAAAGCACAGTAA	9835	False	NA	NA	False	AATAAA	-21	NA	70276646	70394566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
Isoform_65900_4	chr17	-	1049	4	NIC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	30	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	23.2999761564017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCTTTTCTTTCTTTC	NA	False	NA	-5	True	GATAAA	-15	NA	15461015	15451843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_15452674_15454190_15454265_15460531_15460624_15460962
Isoform_65901_18	chr17	-	1161	5	NNC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	14.4805904575746	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCTTTTCTTTCTTTC	NA	False	NA	-5	True	GATAAA	-15	NA	15461015	15451843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_15452674_15453032_15453145_15454190_15454265_15460531_15460624_15460962
Isoform_65902_13	chr17	-	3578	11	FSM	ENSMUSG00000014773.14	ENSMUST00000014917.8	3581	11	2	1	2	-1	multi-exon	FALSE	canonical	2	3	junction_7	1.34536240470737	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGGTGTGACTTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	15596236	15587616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_15588298_15588395_15588514_15588628_15589428_15590468_15590686_15590792_15590963_15591084_15591216_15591867_15591929_15593698_15593957_15594151_15594213_15594927_15595222_15595448
Isoform_65909_3187	chr17	-	816	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	3	939	3	-1	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	3187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTTCTTACACTGTG	NA	False	NA	-14	True	ATTAAA	-14	NA	15718557	15696221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
Isoform_65910_457	chr17	-	1075	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	1	682	1	14	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGATATATTTATTTATT	NA	False	NA	-5	True	AATATA	-16	NA	15718559	15695964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
Isoform_6592_12	chr10	+	3292	14	FSM	ENSMUSG00000043259.16	ENSMUST00000062883.7	3262	14	-30	0	16	0	multi-exon	FALSE	canonical	3	12	junction_11	8.57062549069641	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTATGTTGAAAGCAC	9914	False	NA	NA	False	AATAAA	-16	NA	70276725	70394561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
Isoform_65921_10	chr17	-	1188	6	NIC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	344.156592265788	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAACTAAAAACTTAT	NA	False	NA	-33	True	NA	NA	NA	15747555	15741855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747157
Isoform_65923_848	chr17	-	1090	6	FSM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	11	19	-9	-1	multi-exon	FALSE	canonical	3	811	junction_3	58.5409258553364	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAACTAAAAACTTAT	NA	False	NA	-33	True	NA	NA	NA	15747552	15741855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252
Isoform_65930_119	chr17	-	2034	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	31	3633	5	-2332	multi-exon	FALSE	canonical	3	46	junction_1	3.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTTAGTATGTACAGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	16046817	16027082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_16028064_16040931_16041441_16046273
Isoform_65931_63	chr17	-	4190	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	31	1477	5	-176	multi-exon	FALSE	canonical	3	46	junction_1	3.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTTTGTTCTCTGCTT	NA	False	NA	-3	True	AATAAA	-19	NA	16046817	16024926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_16028064_16040931_16041441_16046273
Isoform_65932_7	chr17	-	3585	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	-5	2118	-5	-817	multi-exon	FALSE	canonical	3	46	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGCCTTTAGAGTGTG	NA	False	NA	NA	False	AGTAAA	-20	NA	16046853	16025567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_16028064_16040931_16041441_16046273
Isoform_65936_4	chr17	-	5294	18	FSM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	-20	6778	-17	-1123	multi-exon	FALSE	canonical	3	25	junction_8	4.93557105021248	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATAGCCTGCTTTAAT	9873	False	NA	NA	False	AATAAA	-20	NA	17845329	17748449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
Isoform_65937_3	chr17	-	5831	18	FSM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	567	5654	9	1	multi-exon	FALSE	canonical	3	25	junction_8	4.93557105021248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGAGGCTCATGCTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	17844742	17747325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
Isoform_65938_8	chr17	-	3708	5	FSM	ENSMUSG00000069743.6	ENSMUST00000232918.2	2735	5	21	-994	8	11	multi-exon	TRUE	canonical	3	6	junction_3	16.8077363139716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22064732	22035854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059585_22059696_22064624
Isoform_6594_6	chr10	+	3269	14	FSM	ENSMUSG00000043259.16	ENSMUST00000173042.9	3310	14	36	5	1	0	multi-exon	FALSE	canonical	3	19	junction_7	7.58072922754149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTATGTTGAAAGCAC	9934	False	NA	NA	False	AATAAA	-16	NA	70276745	70394561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
Isoform_65940_27	chr17	-	3695	5	FSM	ENSMUSG00000069743.6	ENSMUST00000084141.6	3686	5	1	-10	1	10	multi-exon	FALSE	canonical	3	21	junction_3	11.3880419739304	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTGTGCTCAATTTC	NA	False	NA	-2	True	NA	NA	NA	22064739	22035855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624
Isoform_65941_3	chr17	-	3601	4	NIC	ENSMUSG00000069743.6	novel	3686	5	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	20.6774165590278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAACTTGGTTGTGCTCAA	NA	False	NA	-6	True	NA	NA	NA	22064740	22035859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_22039170_22040050_22040178_22042824_22042873_22064624
Isoform_65942_4	chr17	-	3819	6	NNC	ENSMUSG00000069743.6	novel	3686	5	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	13.6674796506159	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22064739	22035854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22039170_22040050_22040178_22042824_22042873_22059126_22059250_22059604_22059696_22064624
Isoform_65943_9	chr17	-	2610	5	FSM	ENSMUSG00000078546.9	ENSMUST00000190066.7	2221	5	270	-659	-17	659	multi-exon	TRUE	canonical	2	10	junction_1	2.29128784747792	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTCGTTGTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	22128637	22097891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22100076_22100938_22101066_22106291_22106340_22127029_22127178_22128534
Isoform_65944_51	chr17	-	3283	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	-22	4	-9	-4	multi-exon	FALSE	canonical	3	43	junction_3	17.9041894538681	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGGACTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	22181454	22145944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
Isoform_65946_18	chr17	-	3211	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-10	-4	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_5	22.8508205541945	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGGACTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	22181455	22145944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172962_22181236
Isoform_65947_5	chr17	-	3290	7	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-39	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	33.0088372005639	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22181484	22145945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172962_22180268_22180320_22181236
Isoform_65948_4	chr17	-	3158	5	NIC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	32.101401838549	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGGACTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	22181454	22145944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_22148471_22149346_22149474_22151973_22152095_22172868_22173035_22181236
Isoform_65949_13	chr17	-	3248	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-24	-3	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_3	26.7776025812618	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181469	22145943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22173035_22181236
Isoform_6595_3	chr10	+	691	3	NNC	ENSMUSG00000112028.2	novel	429	2	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGTACTCTGACTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	71037586	71040316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_71037641_71038724_71039000_71039954
Isoform_65951_14	chr17	-	2514	3	FSM	ENSMUSG00000071267.12	ENSMUST00000126485.2	2481	3	-32	-1	-32	1	multi-exon	FALSE	canonical	3	50	junction_2	18	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22181477	22158724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22160832_22172868_22173035_22181236
Isoform_65952_3	chr17	-	2451	3	NNC	ENSMUSG00000071267.12	novel	2481	3	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	28	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22181488	22158725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22160832_22172868_22172962_22181236
Isoform_65953_5	chr17	-	2977	4	NNC	ENSMUSG00000117234.2	novel	1756	2	NA	NA	-11664	620	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGGCTGTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	22300533	22285624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22287883_22288751_22288879_22297569_22297618_22299989
Isoform_65954_22	chr17	-	2628	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	244	0	244	0	multi-exon	FALSE	canonical	3	22	junction_1	1.11803398874989	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGGCTGTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	22384927	22363339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
Isoform_65955_8	chr17	-	2718	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	157	-3	157	3	multi-exon	FALSE	canonical	3	22	junction_1	1.11803398874989	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTGTTTCCATTTTA	NA	False	NA	NA	False	NA	NA	NA	22385014	22363336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
Isoform_65956_3	chr17	-	648	4	ISM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	166	2912	166	-2912	5prime_fragment	FALSE	canonical	3	23	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGTTCTTTACTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	22385005	22366251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_22366497_22369015_22369064_22382167_22382317_22384799
Isoform_65957_7	chr17	-	4929	5	FSM	ENSMUSG00000096433.3	ENSMUST00000179996.3	4882	5	-40	-7	-40	7	multi-exon	TRUE	canonical	2	8	junction_3	10.6066017177982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTCAGCAAATAG	NA	False	NA	NA	False	NA	NA	NA	22444637	22416238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22420791_22421656_22421784_22424285_22424334_22442991_22443076_22444519
Isoform_65959_6	chr17	-	4847	4	NIC	ENSMUSG00000096433.3	novel	4882	5	NA	NA	-44	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGTCCTTCAGCAAAT	NA	False	NA	NA	False	NA	NA	NA	22444641	22416240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_22420791_22421656_22421784_22424285_22424334_22444519
Isoform_65960_15	chr17	-	3471	6	FSM	ENSMUSG00000117284.2	ENSMUST00000233465.2	3474	6	2	1	2	-1	multi-exon	FALSE	canonical	2	21	junction_5	14.9853261559434	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTGTTTGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	22533816	22504852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217_22532302_22533727
Isoform_65962_12	chr17	-	3577	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_6	14.4501057281791	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTGTTTGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	22533812	22504852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22532217_22532302_22533727
Isoform_65963_5	chr17	-	3791	8	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	17.3075422983208	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTGTTTGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	22533813	22504852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22531009_22531223_22532217_22532302_22533727
Isoform_65965_28	chr17	-	2764	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	20	0	20	0	multi-exon	FALSE	canonical	3	51	junction_4	24.8997991959775	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580361	22556969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
Isoform_65966_41	chr17	-	2695	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	20.2484567313166	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580365	22556969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578420_22578506_22580148
Isoform_6597_102	chr10	+	3698	6	FSM	ENSMUSG00000060733.14	ENSMUST00000121446.2	1492	6	-52	-2154	21	-1731	multi-exon	FALSE	canonical	3	80	junction_3	108.435049684131	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGATGGAAGTTGCATA	2237	False	NA	8	True	AATAAA	-22	NA	71183613	71219984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208534_71208711_71212534_71212617_71217034
Isoform_65970_7	chr17	-	5240	5	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	16	-1	intron_retention	FALSE	canonical	3	53	junction_2	18.6329680942141	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGACTTGGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	22580365	22556970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22559089_22559947_22562675_22577803_22577897_22578420_22578506_22580148
Isoform_65972_7	chr17	-	3439	6	FSM	ENSMUSG00000002617.15	ENSMUST00000037057.14	4103	6	4	660	3	347	multi-exon	FALSE	canonical	3	8	junction_3	2.41660919471891	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCAGTGGCAAGCATAC	NA	False	NA	NA	False	NA	NA	NA	23412222	23393502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23396339_23397248_23397376_23401121_23401207_23410318_23410410_23410650_23410777_23412048
Isoform_65973_229	chr17	-	2671	6	FSM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	14	1	14	-1	multi-exon	FALSE	canonical	3	33	junction_4	6.49923072370877	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGACTCTTTAGCTGG	6698	False	NA	NA	False	AATAAA	-19	NA	23783198	23775741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782942
Isoform_65975_9	chr17	-	2778	6	NNC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	109	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	16.80476123008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGACTCTTTAGCTG	6793	False	NA	NA	False	AATAAA	-18	NA	23783103	23775742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782739
Isoform_65976_5	chr17	-	2872	6	NNC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	16.80476123008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGTGACTCTTTAGCT	6698	False	NA	NA	False	AATAAA	-17	NA	23783198	23775743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782739
Isoform_65977_3	chr17	-	2677	5	NIC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	93	-1	intron_retention	FALSE	canonical	3	33	junction_3	7.11951543294907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGACTCTTTAGCTGG	6777	False	NA	NA	False	AATAAA	-19	NA	23783119	23775741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_23777287_23778356_23778679_23778958_23779077_23780119_23780635_23782942
Isoform_65978_3	chr17	-	2219	5	ISM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	265	6	209	2	intron_retention	FALSE	canonical	3	79	junction_1	6.22494979899437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCCCTTGGCTCTGTG	5088	False	NA	-6	True	ATTAAA	-15	NA	23804941	23794823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411
Isoform_65979_115	chr17	-	2105	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-3	2	-3	-2	multi-exon	FALSE	canonical	3	79	junction_1	5.98665181883831	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTGGCTCTGTGTGCT	4820	False	NA	-2	True	ATTAAA	-19	NA	23805209	23794819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
Isoform_65983_20	chr17	-	2499	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-3	-392	-3	392	multi-exon	FALSE	canonical	3	79	junction_1	5.98665181883831	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTGTTGTTGGTATCT	4820	False	NA	NA	False	NA	NA	NA	23805209	23794425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
Isoform_65985_5	chr17	-	3216	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-30	-1082	-30	1082	multi-exon	TRUE	canonical	3	79	junction_1	5.98665181883831	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATACAAAAAGATGTTT	4793	False	NA	NA	False	ATTAAA	-20	NA	23805236	23793735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
Isoform_65986_6	chr17	-	1895	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	380	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	32.2837420383697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCTTGGCTCTGTGTGC	NA	False	NA	-3	True	ATTAAA	-18	NA	23818081	23794820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23818015
Isoform_65987_12	chr17	-	2226	7	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	37.0929762743419	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4820	False	NA	0	True	ATTAAA	-21	NA	23805209	23794817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23803793_23803913_23804411_23804549_23804934
Isoform_65989_23	chr17	-	2087	6	NIC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	27.6579102609	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4819	False	NA	0	True	ATTAAA	-21	NA	23805210	23794817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23804934
Isoform_65990_3	chr17	-	1860	6	NNC	ENSMUSG00000062012.15	novel	2139	6	NA	NA	390	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	36.7390800102561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGCCCTTGGCTCTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	23818071	23794824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23818015
Isoform_65991_3	chr17	-	606	3	FSM	ENSMUSG00000062012.15	ENSMUST00000228298.2	502	3	-60	-44	-4	44	multi-exon	FALSE	canonical	3	12	junction_1	39	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGCTTTTATGGTGTA	4819	False	NA	NA	False	AATAAA	-18	NA	23805210	23803719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23803913_23804411_23804549_23804934
Isoform_65992_133	chr17	-	1511	13	FSM	ENSMUSG00000041319.15	ENSMUST00000047436.11	1504	13	-7	0	-7	0	multi-exon	TRUE	canonical	3	423	junction_10	38.5186643070603	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	787	False	NA	-21	True	AATAAA	-14	NA	23892823	23887591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
Isoform_65995_213	chr17	-	1433	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	16	1	5	0	multi-exon	FALSE	canonical	3	160	junction_13	93.5049281997111	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGCATTTTATTCC	770	False	NA	-22	True	AATAAA	-13	NA	23892840	23887592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
Isoform_65996_119	chr17	-	1427	14	FSM	ENSMUSG00000041319.15	ENSMUST00000115490.9	1431	14	5	-1	5	0	multi-exon	FALSE	canonical	3	69	junction_13	116.170706876108	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	770	False	NA	-21	True	AATAAA	-14	NA	23892840	23887591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
Isoform_66000_83	chr17	-	990	4	FSM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	-7	1	-7	-1	multi-exon	FALSE	canonical	3	66	junction_1	6.34209919681348	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGGCCTGATCCCTAA	NA	False	NA	-2	True	AATAAA	-17	NA	23896449	23894419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23895021_23895112_23895248_23895492_23895598_23896300
Isoform_66001_90	chr17	-	2047	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	-4	532	-4	-532	multi-exon	FALSE	canonical	3	32	junction_1	3.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGTGTTCCCAAGAC	NA	False	NA	NA	False	AATAAA	-33	NA	23959376	23955691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23956974_23957113_23957336_23958833
Isoform_66002_69	chr17	-	2579	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	32	junction_1	3.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGCCTGACCACATTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	23959376	23955159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23956974_23957113_23957336_23958833
Isoform_66006_10	chr17	-	2313	9	ISM	ENSMUSG00000040680.10	ENSMUST00000046525.10	2123	10	442	3	442	-3	3prime_fragment	TRUE	canonical	1	2	junction_8	4.32290411644765	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCTTTAGCAAGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	23964365	23960173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_23960946_23961170_23961250_23961330_23961457_23961535_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908
Isoform_66009_3	chr17	-	1351	2	NIC	ENSMUSG00000040680.10	novel	2123	10	NA	NA	3203	-2	intron_retention	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTTAGCAAGTTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	23961604	23960172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_23961250_23961330
Isoform_6601_43	chr10	+	5406	6	FSM	ENSMUSG00000060733.14	ENSMUST00000121446.2	1492	6	-31	-3883	-31	-2	multi-exon	FALSE	canonical	3	80	junction_3	108.435049684131	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCTTCCGTTGATTAGC	2258	False	NA	2	True	ATTAAA	-15	NA	71183634	71221713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208534_71208711_71212534_71212617_71217034
Isoform_66010_6	chr17	-	2536	8	NIC	ENSMUSG00000040680.10	novel	2123	10	NA	NA	442	-5	intron_retention	FALSE	canonical	1	2	junction_7	4.53107186490106	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGGCTTTAGCAAGTTC	NA	False	NA	NA	False	AATAAA	-13	NA	23964365	23960175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_23961250_23961330_23961457_23961535_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908
Isoform_66014_6	chr17	-	3379	9	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	-8	-7	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	43.4667617266343	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGAGCTGCTGTGTGTC	7597	False	NA	-6	True	AATAAA	-18	NA	23990504	23971773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
Isoform_66016_100	chr17	-	3299	8	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	-24	-5	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	24.7831410768016	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCTGCTGTGTGTCAG	7581	False	NA	-4	True	AATAAA	-20	NA	23990520	23971771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
Isoform_66020_7	chr17	-	2582	8	NIC	ENSMUSG00000040097.17	novel	2443	7	NA	NA	30	-9	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	46.0230643154016	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATGCAAATAATGTTG	7555	False	NA	NA	False	AATATA	-11	NA	23990546	23974402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
Isoform_66021_4	chr17	-	2617	8	NIC	ENSMUSG00000040097.17	novel	2443	7	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	46.0230643154016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTTGTGTGTTTGAC	7530	False	NA	NA	False	AATATA	-21	NA	23990571	23974392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
Isoform_66024_34	chr17	-	2468	7	FSM	ENSMUSG00000040097.17	ENSMUST00000086325.13	2443	7	-24	-1	-24	1	multi-exon	FALSE	canonical	3	77	junction_6	22.386131619574	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTTGTGTGTTTGAC	7581	False	NA	NA	False	AATATA	-21	NA	23990520	23974392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
Isoform_66025_7	chr17	-	684	3	FSM	ENSMUSG00000023911.13	ENSMUST00000024704.10	694	3	9	1	9	-1	multi-exon	FALSE	canonical	3	11	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTAGTTTTTGTTGTTG	NA	False	NA	-1	True	AATAAA	-25	NA	24005046	23995890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_23996074_23998601_23999031_24004974
Isoform_66031_147	chr17	-	488	3	FSM	ENSMUSG00000055839.7	ENSMUST00000232702.2	581	3	29	64	29	0	multi-exon	FALSE	canonical	3	11428	junction_1	404.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	-36	True	AATAAA	-18	NA	24048028	24043782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24043954_24046441_24046548_24047817
Isoform_66032_58	chr17	-	570	3	FSM	ENSMUSG00000055839.7	ENSMUST00000232702.2	581	3	13	-2	13	2	multi-exon	FALSE	canonical	3	11428	junction_1	404.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGCATTTCTCATTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	24048044	24043716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24043954_24046441_24046548_24047817
Isoform_66036_80	chr17	-	406	4	FSM	ENSMUSG00000055839.7	ENSMUST00000233519.2	414	4	13	-5	-3	0	multi-exon	FALSE	canonical	3	315	junction_3	5439.43761390418	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTTTTCTGTTCCCTCT	NA	False	NA	-31	True	AATAAA	-23	NA	24048075	24043777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24043954_24046441_24046548_24047817_24047923_24048056
Isoform_66037_2571	chr17	-	452	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	14	71	-8	0	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	2571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	-36	True	AATAAA	-18	NA	24048096	24043782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
Isoform_66038_986	chr17	-	497	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	35	5	-3	2	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGCATTTCTCATTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	24048075	24043716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
Isoform_66039_103	chr17	-	493	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	-22	66	-22	0	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTTTTCTGTTCCCTCT	NA	False	NA	-31	True	AATAAA	-23	NA	24048132	24043777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
Isoform_66040_55	chr17	-	549	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	-17	5	-17	2	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGCATTTCTCATTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	24048127	24043716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
Isoform_66043_8	chr17	-	1735	5	FSM	ENSMUSG00000024114.16	ENSMUST00000151797.3	1799	5	11	53	-6	-53	multi-exon	FALSE	canonical	3	18	junction_2	4.71036092035419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGCTTCGTTCACATA	NA	False	NA	-32	True	NA	NA	NA	24063135	24060078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24061500_24062415_24062585_24062812_24062846_24062930_24062958_24063050
Isoform_66046_4	chr17	-	1676	3	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-8	-54	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGGCTTCGTTCACAT	NA	False	NA	-33	True	NA	NA	NA	24063137	24060079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24061500_24062415_24062585_24063050
Isoform_66047_5	chr17	-	2132	3	FSM	ENSMUSG00000024114.16	ENSMUST00000141788.2	903	3	-35	-1194	-12	0	multi-exon	FALSE	canonical	3	22	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGGATGCCTTTAA	NA	False	NA	-6	True	NA	NA	NA	24063158	24060025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24061500_24062415_24062846_24062930
Isoform_66048_8	chr17	-	1983	4	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-12	-56	intron_retention	FALSE	canonical	3	22	junction_1	3.85861230093008	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTCTGGCTTCGTTCAC	NA	False	NA	-35	True	NA	NA	NA	24063158	24060081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24061500_24062415_24062846_24062930_24062958_24063050
Isoform_66049_3	chr17	-	2773	4	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-24	722	intron_retention	FALSE	canonical	3	22	junction_1	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACATATAGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	24063170	24059303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24061500_24062415_24062846_24062930_24062958_24063050
Isoform_6605_20	chr10	+	1321	5	FSM	ENSMUSG00000060733.14	ENSMUST00000118381.8	1323	5	2	0	2	0	multi-exon	FALSE	canonical	3	262	junction_3	39.274673773311	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTAAAGCTGCT	2291	False	NA	NA	False	AATAAA	-14	NA	71183667	71213246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534
Isoform_66053_2488	chr17	-	2417	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	34	-8	34	8	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	2488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGAATATCTTGAAGTG	NA	False	NA	-14	True	AATAAA	-28	NA	24292425	24266699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
Isoform_66054_32	chr17	-	2469	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	-14	-12	-14	12	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATCTTGAAGTGTGTG	NA	False	NA	-10	True	AATAAA	-32	NA	24292473	24266695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
Isoform_6606_171	chr10	+	3683	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	31	1733	31	-1733	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGGATGGAAGTTGCA	2247	False	NA	6	True	AATAAA	-20	NA	71183623	71219982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
Isoform_6607_267	chr10	+	3640	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	75	1732	2	-1732	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	2291	False	NA	7	True	AATAAA	-21	NA	71183667	71219983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
Isoform_66074_189	chr17	-	7158	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	1	2	1	1	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTTTGCCATGGAGC	NA	False	NA	-5	True	AATAAA	-16	NA	24360568	24292655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
Isoform_66078_4	chr17	-	6931	13	NIC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	41.2764225140159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTGTTTGCCATGGA	NA	False	NA	-7	True	AATAAA	-14	NA	24360561	24292657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24298117_24298465_24298619_24299351_24299410_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
Isoform_66083_449	chr17	-	1406	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	90	0	-12	0	multi-exon	TRUE	canonical	3	306	junction_8	20.5156038175824	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382650	24374806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
Isoform_66084_89	chr17	-	1481	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	15	0	15	0	multi-exon	FALSE	canonical	3	306	junction_8	20.5156038175824	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382725	24374806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
Isoform_66085_8	chr17	-	1379	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_9	102.741435015946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382760	24374806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382555
Isoform_66087_6	chr17	-	1492	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	306	junction_8	20.5804653872442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382656	24374806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382307_24382555
Isoform_66088_6	chr17	-	1571	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	5	0	intron_retention	FALSE	canonical	3	306	junction_8	20.5804653872442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382735	24374806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382307_24382555
Isoform_66092_2838	chr17	-	1141	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	43	-1	43	1	multi-exon	FALSE	canonical	3	1416	junction_2	838.5	2838	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGTGTTCTGGCGCT	NA	False	NA	NA	False	AATAAA	-16	NA	24388392	24382838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24383583_24383672_24383857_24388179
Isoform_66096_191	chr17	-	1952	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	15	199	15	-14	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATGAGCTGGAGAGAT	3352	False	NA	-14	True	AATAAA	-7	NA	24439749	24434226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
Isoform_66097_163	chr17	-	2151	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	12	3	12	-3	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACCGGGCAGTGGTGG	3349	False	NA	NA	False	NA	NA	NA	24439752	24434030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
Isoform_66101_10	chr17	-	2120	10	NIC	ENSMUSG00000024118.15	novel	2166	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	19	junction_8	65.8383729904126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACCGGGCAGTGGTGG	3375	False	NA	NA	False	NA	NA	NA	24439726	24434030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439495_24439590_24439664
Isoform_66103_36	chr17	-	2269	9	FSM	ENSMUSG00000024118.15	ENSMUST00000137648.8	2160	9	73	-182	12	-3	multi-exon	FALSE	canonical	3	185	junction_8	21.2485293608758	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACCGGGCAGTGGTGG	3349	False	NA	NA	False	NA	NA	NA	24439752	24434030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
Isoform_66106_6	chr17	-	2247	9	NIC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	19	junction_7	69.7222166888001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTACCGGGCAGTGGTG	3365	False	NA	NA	False	NA	NA	NA	24439736	24434031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439495_24439590_24439664
Isoform_66135_100	chr17	-	3131	17	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-8	-1033	combination_of_known_junctions	FALSE	canonical	3	43	junction_16	200.408917902872	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTACTGTGCTTCAACTG	8758	False	NA	-5	True	AATAAA	-18	NA	24470300	24442204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470154
Isoform_66137_2020	chr17	-	3017	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	83	1033	-8	-1033	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTACTGTGCTTCAACTG	8758	False	NA	-5	True	AATAAA	-18	NA	24470300	24442204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
Isoform_66138_440	chr17	-	3081	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	19	1033	19	-1033	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTACTGTGCTTCAACTG	8694	False	NA	-5	True	AATAAA	-18	NA	24470364	24442204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
Isoform_66147_37	chr17	-	3738	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	48	347	-14	-347	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTCCTCCCATCTTG	8723	False	NA	NA	False	NA	NA	NA	24470335	24441518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
Isoform_6615_122	chr10	+	5371	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	75	1	2	-1	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTCCGTTGATTAGCA	2291	False	NA	3	True	ATTAAA	-16	NA	71183667	71221714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
Isoform_66153_11	chr17	-	2461	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	39.9149606242152	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674285	24662752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_24662820_24662839_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_66155_36	chr17	-	2535	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.0980100079023	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAAAAAACCTGCAGT	NA	False	NA	-18	True	NA	NA	NA	24674285	24662769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_24662820_24662841_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_66157_26	chr17	-	2464	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.5614523223349	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674285	24662752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_24662820_24662839_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_66158_122	chr17	-	2556	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.8523378823506	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTGATTGGGTAGA	NA	False	NA	0	True	AATAAA	-17	NA	24674285	24662751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_24662820_24662841_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_66159_31	chr17	-	2581	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8523378823506	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTGATTGGGTAGA	NA	False	NA	0	True	AATAAA	-17	NA	24674310	24662751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_24662820_24662841_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_6616_69	chr10	+	5412	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	34	1	34	-1	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTCCGTTGATTAGCA	2250	False	NA	3	True	ATTAAA	-16	NA	71183626	71221714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
Isoform_66163_10	chr17	-	2616	14	NNC	ENSMUSG00000024137.10	novel	2642	13	NA	NA	0	-14	intron_retention	FALSE	non_canonical	0	0	junction_1	32.0572712352947	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAAAAAACCTGCAGT	NA	False	NA	-18	True	NA	NA	NA	24674285	24662769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_24662820_24662839_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_66165_4	chr17	-	1384	2	FSM	ENSMUSG00000024137.10	ENSMUST00000226743.2	1377	2	-13	6	-13	-6	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	7399	False	NA	NA	False	NA	NA	NA	24689178	24684437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24685707_24689063
Isoform_66169_42	chr17	-	3310	9	FSM	ENSMUSG00000024142.16	ENSMUST00000179163.3	3340	9	30	0	-1	0	multi-exon	FALSE	canonical	3	12	junction_8	23.0813777751676	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9617	False	NA	0	True	AATAAA	-17	NA	24698022	24692524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
Isoform_66171_168	chr17	-	3329	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	31	-2	0	0	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9618	False	NA	0	True	AATAAA	-17	NA	24698021	24692524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
Isoform_66173_5	chr17	-	3350	9	FSM	ENSMUSG00000024142.16	ENSMUST00000234335.2	1574	9	-25	-1751	-3	0	multi-exon	FALSE	canonical	2	2	junction_8	26.1951808545007	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9602	False	NA	0	True	AATAAA	-17	NA	24698037	24692524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697458_24697985
Isoform_66175_3	chr17	-	3486	8	NIC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	60	junction_7	10.7304639761222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGAGGCCGATTGCT	9615	False	NA	-3	True	AATAAA	-14	NA	24698024	24692527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697453_24697985
Isoform_66177_3	chr17	-	3449	8	NIC	ENSMUSG00000024142.16	novel	3340	9	NA	NA	7	1	intron_retention	FALSE	canonical	3	12	junction_7	24.6717222250702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGCCGATTGCTTTCT	9594	False	NA	1	True	AATAAA	-18	NA	24698045	24692523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24694926_24695019_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
Isoform_66178_5	chr17	-	3443	8	NIC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	60	junction_7	10.3509833901353	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGAGGCCGATTGCTT	9617	False	NA	-2	True	AATAAA	-15	NA	24698022	24692526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24694926_24695019_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
Isoform_66187_35	chr17	-	2627	21	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_19	100.719859014993	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746833	24727827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737769_24738104_24738221_24746739
Isoform_66189_69	chr17	-	2615	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_19	98.6916789805503	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746795	24727823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738087_24738221_24746739
Isoform_66192_603	chr17	-	2600	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	115	288	-2	0	multi-exon	FALSE	canonical	3	280	junction_18	53.1587010751768	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746797	24727823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
Isoform_66193_89	chr17	-	2706	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	8	289	8	-1	multi-exon	FALSE	canonical	3	280	junction_18	53.1587010751768	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGAGACAGCTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	24746904	24727824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
Isoform_66198_19	chr17	-	2656	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176086.8	2687	21	31	0	4	0	multi-exon	FALSE	canonical	3	43	junction_19	106.585693223809	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738087_24738221_24746739
Isoform_66199_20	chr17	-	2620	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176086.8	2687	21	67	0	-2	0	multi-exon	FALSE	canonical	3	43	junction_19	106.585693223809	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746797	24727823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738087_24738221_24746739
Isoform_66202_238	chr17	-	2638	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	185	junction_18	68.0276414408143	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGAGACAGCTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	24746833	24727824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
Isoform_66204_43	chr17	-	2710	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_18	68.0276414408143	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746904	24727823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
Isoform_66206_18	chr17	-	2512	20	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	24	junction_17	100.54791721617	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGACAGCTTCTTGGGAC	NA	False	NA	-3	True	AATAAA	-21	NA	24746797	24727819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24737715_24737774_24738104_24738221_24746739
Isoform_66207_50	chr17	-	2651	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_17	98.1200667549712	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746811	24727823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735571_24737715_24737774_24738104_24738221_24746739
Isoform_66210_38	chr17	-	2675	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176668.8	2667	21	-9	1	4	-1	multi-exon	FALSE	canonical	3	46	junction_17	106.150647666418	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGAGACAGCTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	24746833	24727824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735574_24737715_24737774_24738104_24738221_24746739
Isoform_66215_45	chr17	-	2630	21	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	97.3074894342671	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
Isoform_66219_34	chr17	-	2602	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	105.422530798686	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746802	24727823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
Isoform_66220_22	chr17	-	2633	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	105.422530798686	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
Isoform_66223_67	chr17	-	1399	9	FSM	ENSMUSG00000079657.11	ENSMUST00000035797.16	1575	9	166	10	4	1	multi-exon	FALSE	canonical	3	65	junction_8	7.78520230951001	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCATCTGTGGAAA	NA	False	NA	-12	True	AATAAA	-13	NA	24752696	24748037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24748618_24748714_24748792_24748887_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
Isoform_66224_7	chr17	-	1486	8	NIC	ENSMUSG00000079657.11	novel	1575	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	65	junction_7	8.15412753876019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGTCATCTGTGGAA	NA	False	NA	-13	True	AATAAA	-12	NA	24752688	24748038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24748618_24748714_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
Isoform_66226_4	chr17	-	1883	6	NIC	ENSMUSG00000079657.11	novel	1658	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	65	junction_5	8.88594395660922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGTCATCTGTGGAA	NA	False	NA	-13	True	AATAAA	-12	NA	24752718	24748038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24748945_24749028_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
Isoform_66228_32	chr17	-	5502	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	3	52	junction_11	56.8017110217641	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCAGACAGCTTCTTTA	NA	False	NA	-6	True	NA	NA	NA	24851568	24815457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_66229_6	chr17	-	5653	42	FSM	ENSMUSG00000002496.11	ENSMUST00000227745.2	5598	42	-24	-31	8	-1	multi-exon	FALSE	canonical	3	45	junction_16	65.9182609954111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCAGTCAGACAGCT	NA	False	NA	-12	True	AATAAA	-42	NA	24851593	24815463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_66230_5	chr17	-	5522	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	42	junction_40	64.1385024770613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851594	24815461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
Isoform_66231_16	chr17	-	5494	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	3	52	junction_11	57.1288018428533	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCGTGGAGTTCAGA	NA	False	NA	-40	True	AATAAA	-14	NA	24851591	24815491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_66233_14	chr17	-	5580	41	NIC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_15	55.0992229981512	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851593	24815464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_66237_16	chr17	-	5456	40	NIC	ENSMUSG00000002496.11	novel	5459	40	NA	NA	8	8	combination_of_known_junctions	TRUE	canonical	3	42	junction_39	50.4479734738018	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGACAGCTTCTTTATTT	NA	False	NA	-3	True	NA	NA	NA	24851593	24815454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
Isoform_66238_103	chr17	-	5449	40	FSM	ENSMUSG00000002496.11	ENSMUST00000228412.2	5432	40	13	-30	-9	-2	multi-exon	FALSE	canonical	3	88	junction_15	40.1073674085831	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851591	24815464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_66239_43	chr17	-	5588	41	FSM	ENSMUSG00000002496.11	ENSMUST00000226284.2	6266	41	8	670	8	3	multi-exon	FALSE	canonical	3	45	junction_15	53.8189964139058	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGTCAGACAGCTTCTT	NA	False	NA	-8	True	NA	NA	NA	24851593	24815459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_66240_13	chr17	-	5448	40	FSM	ENSMUSG00000002496.11	ENSMUST00000226398.2	5459	40	-9	20	-9	-1	multi-exon	FALSE	canonical	3	42	junction_39	50.8383497379318	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCAGTCAGACAGCT	NA	False	NA	-12	True	AATAAA	-42	NA	24851591	24815463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
Isoform_66241_69	chr17	-	5457	40	FSM	ENSMUSG00000002496.11	ENSMUST00000097373.2	6018	40	10	551	8	1	multi-exon	FALSE	canonical	3	83	junction_15	40.6087957618561	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851593	24815461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_66243_43	chr17	-	1262	2	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	4236	2	4203	-2	3prime_fragment	FALSE	canonical	3	161	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCGCCTGTGTGTT	NA	False	NA	-8	True	ATTAAA	-15	NA	24859728	24858261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_24859364_24859568
Isoform_66245_109	chr17	-	2113	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	22	1	-16	-1	multi-exon	FALSE	canonical	3	54	junction_5	35.3478743663919	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCGCCTGTGTGTTT	5163	False	NA	-7	True	ATTAAA	-16	NA	24869279	24858260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
Isoform_66246_60	chr17	-	2142	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	-7	1	-7	-1	multi-exon	FALSE	canonical	3	54	junction_5	35.3478743663919	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCGCCTGTGTGTTT	5134	False	NA	-7	True	ATTAAA	-16	NA	24869308	24858260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
Isoform_66249_22	chr17	-	2050	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234557.2	2035	6	-16	1	-16	-1	multi-exon	TRUE	canonical	3	15	junction_1	24.9671784549236	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCGCCTGTGTGTTT	5163	False	NA	-7	True	ATTAAA	-16	NA	24869279	24858260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24859364_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
Isoform_66250_11	chr17	-	1592	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234557.2	2035	6	-43	486	-5	-2	multi-exon	FALSE	canonical	3	15	junction_1	24.9671784549236	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTCTTACCCACCCT	5136	False	NA	-2	True	AATAAA	-19	NA	24869306	24858745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24859364_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
Isoform_66251_8	chr17	-	720	2	FSM	ENSMUSG00000071230.8	ENSMUST00000095544.6	638	2	-82	0	-82	0	multi-exon	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCGTGTGACCCTTTTT	8875	False	NA	NA	False	AATAAA	-20	NA	24877513	24876303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24876479_24876968
Isoform_66253_18	chr17	-	1952	4	FSM	ENSMUSG00000007021.6	ENSMUST00000007236.5	1965	4	14	-1	14	1	multi-exon	FALSE	canonical	3	8	junction_2	5.18544972870135	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCCCCTGGACTTAT	NA	False	NA	0	True	AATAAA	-24	NA	24908915	24904064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24905415_24905492_24905636_24906476_24906715_24908694
Isoform_66254_10	chr17	-	1155	4	FSM	ENSMUSG00000040888.11	ENSMUST00000234520.2	1177	4	20	2	1	-2	multi-exon	FALSE	canonical	0	0	junction_1	273.584843634779	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGGCTGGTTTCTGTGTG	NA	False	NA	-12	True	AATAAA	-12	NA	24915066	24912165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24912587_24913141_24913417_24914227_24914425_24914804
Isoform_66255_5	chr17	-	1263	4	FSM	ENSMUSG00000040888.11	ENSMUST00000234520.2	1177	4	-88	2	-44	-2	multi-exon	FALSE	canonical	0	0	junction_1	273.584843634779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGGCTGGTTTCTGTGTG	NA	False	NA	-12	True	AATAAA	-12	NA	24915174	24912165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24912587_24913141_24913417_24914227_24914425_24914804
Isoform_66256_10	chr17	-	670	3	FSM	ENSMUSG00000040888.11	ENSMUST00000234235.2	682	3	0	12	0	-12	multi-exon	FALSE	canonical	3	24	junction_2	299	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTTCTGTAGTTGA	NA	False	NA	-6	True	ATTAAA	-15	NA	24915064	24913170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24913417_24914227_24914392_24914804
Isoform_66257_4	chr17	-	759	3	FSM	ENSMUSG00000040888.11	ENSMUST00000234235.2	682	3	-89	12	-23	-12	multi-exon	FALSE	canonical	3	24	junction_2	299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTTCTGTAGTTGA	NA	False	NA	-6	True	ATTAAA	-15	NA	24915153	24913170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24913417_24914227_24914392_24914804
Isoform_66258_78	chr17	-	772	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	-3	1007	-3	-12	multi-exon	FALSE	canonical	3	527	junction_2	47.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTTCTGTAGTTGA	NA	False	NA	-6	True	ATTAAA	-15	NA	24915133	24913170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24913417_24914227_24914425_24914804
Isoform_66259_120	chr17	-	702	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	66	1008	0	-13	multi-exon	FALSE	canonical	3	527	junction_2	47.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGTTTCTGTAGTTG	NA	False	NA	-7	True	ATTAAA	-14	NA	24915064	24913171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24913417_24914227_24914425_24914804
Isoform_6626_35	chr10	+	2067	8	FSM	ENSMUSG00000019923.15	ENSMUST00000105431.8	2676	8	-15	624	-15	0	multi-exon	FALSE	canonical	3	29	junction_7	390.63955932051	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72490711	72504997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72503730
Isoform_66260_10	chr17	-	808	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	-39	1007	-39	-12	multi-exon	FALSE	canonical	3	527	junction_2	47.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTTCTGTAGTTGA	NA	False	NA	-6	True	ATTAAA	-15	NA	24915169	24913170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24913417_24914227_24914425_24914804
Isoform_66271_1087	chr17	-	2500	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	23	2703	-6	-194	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	1087	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTTTCTCATGTGAAT	NA	False	NA	-25	True	NA	NA	NA	24926611	24919625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
Isoform_6628_259	chr10	+	1152	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-14	0	-13	0	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72490713	72504997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
Isoform_66286_1188	chr17	-	655	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	75	2	-9	-2	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTTTCTGGTGACTA	NA	False	NA	NA	False	AATAAA	-20	NA	24943377	24941035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
Isoform_66287_113	chr17	-	702	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	28	2	28	-2	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTTTCTGGTGACTA	NA	False	NA	NA	False	AATAAA	-20	NA	24943424	24941035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
Isoform_6629_21	chr10	+	1761	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	3	-626	3	2	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACGTGTTTAGTTGCT	NA	False	NA	NA	False	TATAAA	-34	NA	72490730	72505623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
Isoform_66299_735	chr17	-	1401	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	20	6	1	0	multi-exon	FALSE	canonical	3	605	junction_4	56.4111888034831	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105302	25101591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
Isoform_6630_1428	chr10	+	1793	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	37	4	-13	-4	multi-exon	FALSE	canonical	3	928	junction_7	94.1772102940808	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGTCCTTGTTG	NA	False	NA	6	True	AATAAA	-19	NA	72490713	72510792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
Isoform_66300_41	chr17	-	1376	7	NIC	ENSMUSG00000039183.7	novel	1427	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	38	junction_6	244.594051440341	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105289	25101591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105264
Isoform_66301_31	chr17	-	1413	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234579.2	1445	7	24	8	0	0	multi-exon	FALSE	canonical	3	14	junction_6	253.310580118557	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105289	25101592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104838_25105252
Isoform_66302_57	chr17	-	1405	7	FSM	ENSMUSG00000039183.7	ENSMUST00000235055.2	950	7	23	-478	0	0	multi-exon	FALSE	canonical	3	41	junction_5	246.619646419339	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105289	25101591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104609_25104692_25104812_25105252
Isoform_66304_108	chr17	-	1213	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234352.2	1224	6	10	1	0	0	multi-exon	FALSE	canonical	3	81	junction_4	254.082191426318	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105313	25101591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104692_25104812_25105252
Isoform_66308_28	chr17	-	2375	5	NIC	ENSMUSG00000039183.7	novel	950	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	632	junction_1	50.0967813337344	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105312	25101591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25104812_25105252
Isoform_66313_16	chr17	-	2613	4	NIC	ENSMUSG00000039183.7	novel	1423	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	632	junction_1	56.7587487137935	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105302	25101592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25102289_25102779_25103210_25103374_25104812_25105252
Isoform_66314_18	chr17	-	1506	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234968.2	1502	7	-5	1	0	0	multi-exon	FALSE	canonical	3	43	junction_1	246.820953999723	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105312	25101591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25102384_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
Isoform_66316_39	chr17	-	1496	8	FSM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	25	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	4.68606270481621	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGCATTTGTGAAGGC	1889	False	NA	NA	False	GATAAA	-16	NA	25114036	25111125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
Isoform_66317_9	chr17	-	1574	7	FSM	ENSMUSG00000073436.12	ENSMUST00000119848.8	5226	7	-14	3666	-7	0	multi-exon	FALSE	canonical	3	26	junction_1	3.80423740350444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGCATTTGTGAAGGC	1882	False	NA	NA	False	GATAAA	-16	NA	25114043	25111125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
Isoform_66318_3	chr17	-	2336	3	NIC	ENSMUSG00000073436.12	novel	1575	7	NA	NA	-2	5	intron_retention	FALSE	canonical	3	26	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTTGTGAAGGCTCTTT	1887	False	NA	NA	False	GATAAA	-21	NA	25114038	25111120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25111919_25112012_25112617_25113104
Isoform_66324_32	chr17	-	5476	32	NIC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_22	16.9783482121344	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155962	25116506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
Isoform_66325_11	chr17	-	5436	31	NIC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_22	11.8369008706765	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155934	25116506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
Isoform_66339_2587	chr17	-	2944	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	45	-317	1	317	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	2587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCCTGTGTGTATTTTG	4818	False	NA	-5	True	ATTAAA	-14	NA	25179618	25161126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
Isoform_66347_175	chr17	-	3794	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	43	-1165	-1	1165	multi-exon	TRUE	canonical	3	1697	junction_3	70.6872513258225	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACTTGGTCATGGTGTC	4816	False	NA	-3	True	NA	NA	NA	25179620	25160278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
Isoform_66359_133	chr17	-	3502	21	FSM	ENSMUSG00000024170.16	ENSMUST00000115181.9	3530	21	24	4	11	3	multi-exon	TRUE	canonical	3	51	junction_18	13.9207578816672	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGCTTCTGTGGTT	NA	False	NA	-5	True	AATAAA	-17	NA	25334917	25318547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
Isoform_66362_38	chr17	-	3473	21	FSM	ENSMUSG00000024170.16	ENSMUST00000024987.6	3434	21	-38	-1	11	1	multi-exon	FALSE	canonical	3	21	junction_20	19.5787512369916	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACAGGCTGCTTCTGTGG	NA	False	NA	-7	True	AATAAA	-15	NA	25334917	25318549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
Isoform_66363_4	chr17	-	3611	20	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	-8	0	intron_retention	FALSE	canonical	3	51	junction_17	12.7013424378288	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334949	25318550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
Isoform_66364_14	chr17	-	1681	2	FSM	ENSMUSG00000024170.16	ENSMUST00000130525.2	1697	2	-19	35	-6	-35	multi-exon	FALSE	canonical	3	73	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	25334947	25333139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25334260_25334386
Isoform_66366_106	chr17	-	1153	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-24	105	-16	-105	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCCATACTGATAAAAAAT	NA	False	NA	-20	True	AATAAA	-19	NA	25459114	25453395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
Isoform_66367_13	chr17	-	2233	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-10	-989	-2	3	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTTTATATCTAGTC	NA	False	NA	NA	False	ATTAAA	-25	NA	25459100	25452301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
Isoform_66368_42	chr17	-	1285	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-24	-27	-16	27	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTGGGTTAAGAAGATT	NA	False	NA	NA	False	AGTAAA	-23	NA	25459114	25453263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
Isoform_66371_4	chr17	-	1348	10	NIC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-16	20	intron_retention	FALSE	canonical	3	143	junction_5	13.752665286014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGACCATCTGGGTTAA	NA	False	NA	NA	False	AGTAAA	-16	NA	25459114	25453270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25453697_25453781_25453864_25453953_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
Isoform_6639_4	chr10	+	2636	4	FSM	ENSMUSG00000040009.7	ENSMUST00000037813.5	3519	4	-115	998	-115	-989	multi-exon	TRUE	canonical	3	7	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAACACAGGATAATTAGT	NA	False	NA	NA	False	NA	NA	NA	74802893	74851741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_74803215_74814622_74814689_74826765_74827973_74850699
Isoform_66390_60	chr17	-	2955	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-335	-1796	-2	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4261	False	NA	-1	True	ATTAAA	-19	NA	25492843	25479483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_66391_861	chr17	-	2482	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	138	-1796	-13	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4734	False	NA	-1	True	ATTAAA	-19	NA	25492370	25479483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_66392_151	chr17	-	2668	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-48	-1796	8	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4548	False	NA	-1	True	ATTAAA	-19	NA	25492556	25479483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_66394_167	chr17	-	1287	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-75	-388	-9	-2	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	4521	False	NA	NA	False	AATAAA	-12	NA	25492583	25480891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_66396_1336	chr17	-	1074	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	138	-388	-13	-2	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	4734	False	NA	NA	False	AATAAA	-12	NA	25492370	25480891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_6641_26	chr10	+	4700	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	-1	2140	-1	-1	multi-exon	FALSE	canonical	3	29	junction_3	6.08751601555753	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGGGGGCCACAGCCA	NA	False	NA	8	True	AATAAA	-17	NA	74896422	75018613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
Isoform_66410_59	chr17	-	2531	7	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	-6	1406	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4524	False	NA	-1	True	ATTAAA	-19	NA	25492580	25479483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
Isoform_66411_49	chr17	-	2794	7	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-2	1406	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4261	False	NA	-1	True	ATTAAA	-19	NA	25492843	25479483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
Isoform_66412_57	chr17	-	1387	7	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	4260	False	NA	NA	False	AATAAA	-12	NA	25492844	25480891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
Isoform_66413_69	chr17	-	1126	7	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	4521	False	NA	NA	False	AATAAA	-12	NA	25492583	25480891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
Isoform_6642_13	chr10	+	4621	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	-23	2241	-23	-102	multi-exon	FALSE	canonical	3	29	junction_3	6.08751601555753	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTACTGGATCATTTGT	NA	False	NA	-93	True	TTTAAA	-9	NA	74896400	75018512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
Isoform_66420_47	chr17	-	1143	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	4	-257	4	-2	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	3824	False	NA	NA	False	AATAAA	-12	NA	25493280	25480891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
Isoform_66422_53	chr17	-	1119	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	28	-257	20	-2	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	3848	False	NA	NA	False	AATAAA	-12	NA	25493256	25480891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
Isoform_6643_5	chr10	+	6841	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	-2	0	-2	0	multi-exon	FALSE	canonical	3	29	junction_3	6.08751601555753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGTTTGTGGTGGTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	74896421	75020753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
Isoform_66433_95	chr17	-	4385	6	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-13	2	intron_retention	FALSE	canonical	3	4214	junction_5	346.443068916092	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTGCATTAT	4734	False	NA	NA	False	AATAAA	-11	NA	25492370	25480892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_66443_8	chr17	-	2682	3	NNC	ENSMUSG00000050824.13	novel	2733	3	NA	NA	-16909	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTCTTTTCCAAAGCAAA	NA	False	NA	NA	False	AATAAA	-19	NA	25733171	25708847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_25711263_25714000_25714153_25733056
Isoform_66444_11	chr17	-	2534	2	NNC	ENSMUSG00000050824.13	novel	2506	2	NA	NA	-16913	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTCTTTTCCAAAGCAAA	NA	False	NA	NA	False	AATAAA	-19	NA	25733175	25708847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_25711263_25733056
Isoform_66446_3	chr17	-	2718	2	NNC	ENSMUSG00000050824.13	novel	2506	2	NA	NA	-17120	-20	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTAGAAAATAAGCTG	NA	False	NA	NA	False	NA	NA	NA	25733382	25708870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_25711263_25733056
Isoform_66448_67	chr17	-	3081	22	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	184.856738057995	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5685	False	NA	-17	True	TATAAA	-18	NA	25946382	25938019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25938257_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
Isoform_66449_76	chr17	-	3088	22	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	3	5	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	174.642076474381	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCTCATAGGATGGT	5686	False	NA	-12	True	TATAAA	-23	NA	25946381	25938014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25938257_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
Isoform_66463_971	chr17	-	3063	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	31	120	-17	0	multi-exon	FALSE	canonical	3	337	junction_21	100.708127696462	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5705	False	NA	-17	True	TATAAA	-18	NA	25946362	25938019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
Isoform_66466_1125	chr17	-	3098	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-10	120	-1	0	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5673	False	NA	-17	True	TATAAA	-18	NA	25946394	25938019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
Isoform_6647_244	chr10	+	6068	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	-14	-1329	-14	-7	multi-exon	FALSE	canonical	3	164	junction_1	14.4858551697855	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTAGTTTGTTCTCCC	NA	False	NA	31	True	AATAAA	-14	NA	75047890	75148226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
Isoform_66484_5	chr17	-	2154	15	ISM	ENSMUSG00000063011.8	ENSMUST00000238120.2	2165	16	324	1	-26	-1	3prime_fragment	FALSE	canonical	3	34	junction_13	10.8984177844347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6916	False	NA	-3	True	AATAAA	-21	NA	25973027	25967587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747
Isoform_66485_4	chr17	-	2041	16	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	17.5494222760244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6916	False	NA	-3	True	AATAAA	-21	NA	25973027	25967587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25972904
Isoform_66487_51	chr17	-	2140	16	FSM	ENSMUSG00000063011.8	ENSMUST00000238120.2	2165	16	25	0	25	0	multi-exon	FALSE	canonical	3	34	junction_13	10.6111052937739	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6617	False	NA	-2	True	AATAAA	-22	NA	25973326	25967586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105
Isoform_66488_89	chr17	-	2045	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	1	-2	0	0	multi-exon	FALSE	canonical	3	34	junction_13	11.5648646230728	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6592	False	NA	-2	True	AATAAA	-22	NA	25973351	25967586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_66489_10	chr17	-	2190	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	-141	-5	-141	3	multi-exon	TRUE	canonical	3	34	junction_13	11.5648646230728	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTAGTGTTCCTAAGA	6450	False	NA	1	True	AATAAA	-25	NA	25973493	25967583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_66490_5	chr17	-	2110	14	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	-28	0	intron_retention	FALSE	canonical	2	3	junction_13	17.5165179863711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6914	False	NA	-2	True	AATAAA	-22	NA	25973029	25967586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972747
Isoform_66491_11	chr17	-	2150	16	FSM	ENSMUSG00000063011.8	ENSMUST00000075884.8	2114	16	-38	2	25	0	multi-exon	FALSE	canonical	1	2	junction_13	16.5577776286554	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTCCTGTAGTGTTCC	6617	False	NA	-4	True	AATAAA	-20	NA	25973326	25967588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105
Isoform_66492_12	chr17	-	2057	17	FSM	ENSMUSG00000063011.8	ENSMUST00000236137.2	2054	17	0	-3	0	0	multi-exon	FALSE	canonical	1	2	junction_13	16.7330838087305	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6592	False	NA	-2	True	AATAAA	-22	NA	25973351	25967586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_66493_4	chr17	-	2451	15	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	28	-1	intron_retention	FALSE	canonical	3	43	junction_12	8.96592187686469	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6620	False	NA	-3	True	AATAAA	-21	NA	25973323	25967587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105
Isoform_66494_13	chr17	-	2361	16	NIC	ENSMUSG00000063011.8	novel	2044	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_15	10.4690018626419	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6591	False	NA	-2	True	AATAAA	-22	NA	25973352	25967586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_66495_3	chr17	-	2739	14	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	43	junction_11	9.27808386665514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6592	False	NA	-3	True	AATAAA	-21	NA	25973351	25967587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105
Isoform_66496_4	chr17	-	2616	15	NIC	ENSMUSG00000063011.8	novel	2054	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	35	junction_14	10.7797997028077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGATGTCCTGTAGTGTT	6592	False	NA	-6	True	AATAAA	-18	NA	25973351	25967590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_66497_66	chr17	-	1312	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	93	0	2	0	multi-exon	FALSE	canonical	3	40	junction_4	8.07387763097757	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGCAGGTCTGTTTATT	4346	False	NA	-1	True	NA	NA	NA	26004554	26001762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
Isoform_66498_8	chr17	-	1103	8	FSM	ENSMUSG00000061046.10	ENSMUST00000138759.8	1074	8	-14	-15	1	-6	multi-exon	FALSE	canonical	3	7	junction_7	17.2496672549984	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGTGGATCCTTCCAG	4345	False	NA	-20	True	AATAAA	-29	NA	26004555	26001781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004401
Isoform_66501_9	chr17	-	1623	8	ISM	ENSMUSG00000061046.10	ENSMUST00000140738.8	1194	9	-40	2959	2	0	5prime_fragment	FALSE	canonical	3	40	junction_3	8.60232526704263	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATCCTTCCAGAGGTGC	4346	False	NA	-14	True	AATAAA	-35	NA	26004554	26001775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
Isoform_66502_5	chr17	-	1782	6	NIC	ENSMUSG00000061046.10	novel	1405	9	NA	NA	4	-6	intron_retention	FALSE	canonical	3	42	junction_5	7.83326241102646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGTGGATCCTTCCAG	4348	False	NA	-20	True	AATAAA	-29	NA	26004552	26001781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26002557_26002758_26002861_26003048_26003547_26003634_26003700_26003977_26004169_26004401
Isoform_66503_53	chr17	-	1348	3	FSM	ENSMUSG00000057411.10	ENSMUST00000236842.2	1886	3	531	7	3	-1	multi-exon	FALSE	canonical	3	227	junction_2	3.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTGTTTGTTC	8395	False	NA	-8	True	AATAAA	-16	NA	26011344	26009480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26009753_26009906_26009958_26010319
Isoform_66504_12	chr17	-	1291	4	FSM	ENSMUSG00000057411.10	ENSMUST00000235327.2	1267	4	-21	-3	1	-2	multi-exon	FALSE	canonical	3	179	junction_3	24.4449494897321	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGTTTGTTCCAGG	8371	False	NA	-4	True	AATAAA	-20	NA	26011368	26009476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545
Isoform_66505_83	chr17	-	888	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	427	6	2	-1	multi-exon	FALSE	canonical	3	112	junction_4	48.7185796180472	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTGTTTGTTC	8394	False	NA	-8	True	AATAAA	-16	NA	26011345	26009480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
Isoform_66507_14	chr17	-	633	5	FSM	ENSMUSG00000057411.10	ENSMUST00000236683.2	627	5	-7	1	1	-1	multi-exon	FALSE	canonical	3	28	junction_4	82.996987897152	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTGTTTGTTC	8371	False	NA	-8	True	AATAAA	-16	NA	26011368	26009480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011304
Isoform_66508_4	chr17	-	1009	4	NIC	ENSMUSG00000057411.10	novel	1321	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	112	junction_3	55.934485486743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTGTTCCAGGAAT	8365	False	NA	-1	True	AATAAA	-23	NA	26011374	26009473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26009753_26009906_26009958_26010319_26010651_26011026
Isoform_66509_6	chr17	-	4966	6	Fusion	ENSMUSG00000002274.14_ENSMUSG00000057411.10	novel	987	5	NA	NA	-10	0	intron_retention	FALSE	canonical	3	84	junction_4	68.0311693270077	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTGTTCCAGGAAT	5883	False	NA	-1	True	AATAAA	-23	NA	26016067	26009473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_-_26009753_26009906_26009958_26010319_26014266_26014347_26014408_26015214_26015616_26015838
Isoform_6651_10	chr10	+	6220	17	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	60.4014887544173	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTAGTTTGTTCTCCC	NA	False	NA	31	True	AATAAA	-14	NA	75047915	75148226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75048052_75064588_75064766_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
Isoform_66510_3	chr17	-	1503	2	FSM	ENSMUSG00000057411.10	ENSMUST00000237703.2	1528	2	25	0	3	0	multi-exon	FALSE	canonical	3	227	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8395	False	NA	-7	True	AATAAA	-17	NA	26011344	26009479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26009958_26010319
Isoform_66511_7	chr17	-	2183	2	FSM	ENSMUSG00000002274.14	ENSMUST00000237849.2	1175	2	-1012	4	-10	-4	multi-exon	FALSE	canonical	3	97	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCACTGTAGTCATGG	5883	False	NA	-6	True	NA	NA	NA	26016067	26013802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26014266_26014347
Isoform_66512_9	chr17	-	1326	4	FSM	ENSMUSG00000002274.14	ENSMUST00000235294.2	1198	4	-55	-73	26	-3	multi-exon	FALSE	canonical	1	3	junction_2	43.8482230730809	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCACTGTAGTCATGGT	5866	False	NA	-5	True	NA	NA	NA	26016084	26013801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26014266_26014347_26014408_26015059_26015616_26015838
Isoform_66513_5	chr17	-	865	4	FSM	ENSMUSG00000002274.14	ENSMUST00000235925.2	698	4	-125	-42	-10	0	multi-exon	FALSE	canonical	2	10	junction_3	38.3173879879908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTAGTCATGGTCTT	5883	False	NA	-2	True	NA	NA	NA	26016067	26013798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26014266_26014347_26014408_26015214_26015324_26015838
Isoform_66514_7	chr17	-	2761	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTTTGGAGGGTAACA	5883	False	NA	NA	False	AATACA	-42	NA	26016067	26012194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
Isoform_66515_194	chr17	-	1157	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-10	1604	-10	0	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTAGTCATGGTCTT	5883	False	NA	-2	True	NA	NA	NA	26016067	26013798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
Isoform_66517_9	chr17	-	1360	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-10	1401	-10	203	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTTTGTTTG	5883	False	NA	0	True	NA	NA	NA	26016067	26013595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
Isoform_66518_11	chr17	-	1962	3	NIC	ENSMUSG00000002274.14	novel	1198	4	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	95	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACTGTAGTCATGGTC	5883	False	NA	-4	True	NA	NA	NA	26016067	26013800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26014266_26014347_26015616_26015838
Isoform_66519_5	chr17	-	1235	3	NIC	ENSMUSG00000002274.14	novel	2751	4	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	84	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCACTGTAGTCATGG	5883	False	NA	-6	True	NA	NA	NA	26016067	26013802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26014408_26015214_26015616_26015838
Isoform_66520_904	chr17	-	1228	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	443	132	1	-1	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6788	False	NA	-20	True	AATAAA	-14	NA	26051892	26049610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
Isoform_66522_47	chr17	-	1372	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	433	-2	-9	2	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAATTTTG	6778	False	NA	NA	False	AATACA	-12	NA	26051902	26049476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
Isoform_66528_76	chr17	-	1420	6	FSM	ENSMUSG00000039615.10	ENSMUST00000236565.2	1408	6	-13	1	9	-1	multi-exon	FALSE	canonical	3	1486	junction_1	49.0167318372002	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6774	False	NA	-20	True	AATAAA	-14	NA	26051906	26049610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26050936_26051019_26051219_26051665
Isoform_6653_7	chr10	+	6159	17	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	61.3715312156215	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTAGTTTGTTCTCCCT	NA	False	NA	32	True	AATAAA	-15	NA	75047884	75148227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75048052_75064588_75064673_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
Isoform_66532_11	chr17	-	1519	5	FSM	ENSMUSG00000039615.10	ENSMUST00000235484.2	1498	5	-21	0	1	0	multi-exon	FALSE	canonical	3	1486	junction_1	49.4115371143218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6766	False	NA	-19	True	AATAAA	-15	NA	26051914	26049609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26049985_26050075_26050606_26050769_26050936_26051019_26051219_26051665
Isoform_66540_187	chr17	-	2833	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	355	1	29	-1	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGACTGCTGTTTTTGTG	6042	False	NA	-1	True	NA	NA	NA	26063470	26057431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
Isoform_66542_4	chr17	-	2944	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	133	junction_17	11.5985323018515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	6007	False	NA	-2	True	NA	NA	NA	26063505	26057432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
Isoform_66545_25	chr17	-	5935	41	FSM	ENSMUSG00000073434.13	ENSMUST00000176923.9	5962	41	27	0	1	0	multi-exon	TRUE	canonical	3	25	junction_38	17.4845646214025	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTTTATTGTCCCA	9835	False	NA	NA	False	AATAAA	-22	NA	26080448	26063745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
Isoform_66546_5	chr17	-	5934	41	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_35	18.9245871817591	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATACATTGTTTTATTGTC	9824	False	NA	NA	False	AATAAA	-19	NA	26080459	26063748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078458_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
Isoform_66547_12	chr17	-	870	5	NIC	ENSMUSG00000025732.7	novel	842	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	117.099049953448	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7782	False	NA	-4	True	AATAAA	-15	NA	26087718	26082671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26083014_26083176_26083327_26083567_26083696_26087387_26087518_26087598
Isoform_66548_4	chr17	-	1026	5	ISM	ENSMUSG00000025732.7	ENSMUST00000237080.2	945	6	-1	1	-1	0	intron_retention	FALSE	canonical	3	13	junction_4	135.241450746434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCGGGTGTTGGTGATT	7791	False	NA	-5	True	AATAAA	-14	NA	26087709	26082672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_26083014_26083224_26083327_26083567_26083696_26084508_26084642_26087387
Isoform_66549_24	chr17	-	898	4	ISM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	25	0	-2	0	intron_retention	FALSE	canonical	3	256	junction_1	25.0377492776186	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7787	False	NA	-4	True	AATAAA	-15	NA	26087713	26082671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387
Isoform_66551_179	chr17	-	811	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	31	0	1	0	multi-exon	FALSE	canonical	3	256	junction_1	22.6770809408971	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7793	False	NA	-4	True	AATAAA	-15	NA	26087707	26082671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
Isoform_66553_24	chr17	-	2573	6	FSM	ENSMUSG00000025730.15	ENSMUST00000167626.8	2506	6	-67	0	-5	0	multi-exon	FALSE	canonical	3	194	junction_1	13.251415018782	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138693	26101087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338
Isoform_66554_24	chr17	-	2541	6	FSM	ENSMUSG00000025730.15	ENSMUST00000167626.8	2506	6	-35	0	3	0	multi-exon	FALSE	canonical	3	194	junction_1	13.251415018782	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138661	26101087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338
Isoform_66557_323	chr17	-	2483	7	FSM	ENSMUSG00000025730.15	ENSMUST00000026826.14	2466	7	-17	0	-4	0	multi-exon	FALSE	canonical	3	152	junction_6	27.4104602904317	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138705	26101087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
Isoform_66560_12	chr17	-	2500	7	NIC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	81.0337721090548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138709	26101087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138537_26138625
Isoform_66562_7	chr17	-	2616	8	NNC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	94.949180822035	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTGTCTGGCTTCAT	NA	False	NA	-3	True	AGTAAA	-15	NA	26138713	26101089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26126803_26126931_26138338_26138524_26138625
Isoform_66567_523	chr17	-	3052	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	114	7	-1	0	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160908	26145401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
Isoform_66570_8	chr17	-	2986	11	NIC	ENSMUSG00000025728.17	novel	2987	11	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	83.7198303868325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTACCAGCTTGGGTGTC	NA	False	NA	-8	True	AATAAA	-15	NA	26161823	26145403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26161767
Isoform_66571_6	chr17	-	2956	10	NIC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	-18	-3	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	88.3641455694685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTACCAGCTTGGGTGT	NA	False	NA	-9	True	AATAAA	-14	NA	26160927	26145404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
Isoform_66574_4	chr17	-	4887	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	38	-1	intron_retention	TRUE	canonical	0	0	junction_4	28.3734030387615	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGCATTCTGTTGT	1760	False	NA	-10	True	AATAAA	-17	NA	26204732	26177341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26178704_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
Isoform_66575_5	chr17	-	4823	11	NIC	ENSMUSG00000037326.11	novel	4536	11	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_4	28.3734030387615	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1823	False	NA	-11	True	AATAAA	-16	NA	26204669	26177342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26178704_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
Isoform_66579_54	chr17	-	4899	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	30	-1	intron_retention	TRUE	canonical	0	0	junction_4	23.9282260103001	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGCATTCTGTTGT	1752	False	NA	-10	True	AATAAA	-17	NA	26204740	26177341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
Isoform_66582_5	chr17	-	4605	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-40	0	intron_retention	TRUE	canonical	0	0	junction_4	29.3189358606345	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1772	False	NA	-12	True	AATAAA	-15	NA	26204720	26177343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26178708_26178780_26178960_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
Isoform_66587_42	chr17	-	5342	15	FSM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	35	6	35	0	multi-exon	FALSE	canonical	3	33	junction_10	23.7715530559927	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGAGCCGGCTTCTTTCT	NA	False	NA	-6	True	ATTAAA	-13	NA	26288484	26208015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
Isoform_66588_59	chr17	-	5207	14	FSM	ENSMUSG00000037098.19	ENSMUST00000120691.9	5249	14	45	-3	35	0	multi-exon	FALSE	canonical	3	56	junction_9	17.5610515785467	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGAGCCGGCTTCTTTCT	NA	False	NA	-6	True	ATTAAA	-13	NA	26288484	26208015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
Isoform_66589_41	chr17	-	4981	14	FSM	ENSMUSG00000037098.19	ENSMUST00000120691.9	5249	14	12	256	2	-256	multi-exon	FALSE	canonical	3	56	junction_9	17.5610515785467	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGGAGCCCCGCCTTT	NA	False	NA	NA	False	NA	NA	NA	26288517	26208274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
Isoform_66590_4	chr17	-	5198	13	NIC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	27.4634858595109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGAGCCGGCTTCTTTCT	NA	False	NA	-6	True	ATTAAA	-13	NA	26288511	26208015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
Isoform_66591_6	chr17	-	4910	13	NIC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	35	-258	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	27.4634858595109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACTGGAGCCCCGCCT	NA	False	NA	NA	False	NA	NA	NA	26288484	26208276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
Isoform_66592_5	chr17	-	2882	5	ISM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	27	24335	27	-9720	5prime_fragment	FALSE	canonical	3	82	junction_3	16.7984374273323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	26288492	26232344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
Isoform_66593_98	chr17	-	2138	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	59	27	-3	-8	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGACTGATTCT	NA	False	NA	-31	True	NA	NA	NA	26309252	26300211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
Isoform_66594_170	chr17	-	1998	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	215	11	98	8	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACCATGGAAATAGTGC	NA	False	NA	-15	True	NA	NA	NA	26309096	26300195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
Isoform_66595_99	chr17	-	2054	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	144	26	27	-7	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGACTGATTCTA	NA	False	NA	-30	True	NA	NA	NA	26309167	26300210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
Isoform_66602_9	chr17	-	1928	9	NIC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	57.9427249531811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	-23	True	NA	NA	NA	26309167	26300203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26309070
Isoform_66603_7	chr17	-	2280	12	Fusion	ENSMUSG00000036775.14_ENSMUSG00000024177.10	novel	2224	9	NA	NA	2	-7	multi-exon	FALSE	canonical	2	3	junction_8	95.7316324656874	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGACTGATTCTA	NA	False	NA	-30	True	NA	NA	NA	26314445	26300210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26312590_26312704_26312832_26312935_26313110_26313245_26314338
Isoform_66604_15	chr17	-	1936	8	NIC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	99	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_7	60.1518486661814	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATAGTGCTTGTGTTT	NA	False	NA	-7	True	NA	NA	NA	26309095	26300187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26308937
Isoform_66607_245	chr17	-	868	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	129	9	0	-3	multi-exon	FALSE	canonical	3	296	junction_2	23.847169643377	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAATGGTCTACTTA	NA	False	NA	-9	True	ATTAAA	-13	NA	26314447	26310716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
Isoform_66612_28	chr17	-	997	4	NIC	ENSMUSG00000024177.10	novel	926	6	NA	NA	0	-3	intron_retention	FALSE	canonical	3	304	junction_1	22.7596133534821	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAATGGTCTACTTA	NA	False	NA	-9	True	ATTAAA	-13	NA	26314447	26310716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26311127_26312590_26312935_26313110_26313245_26314338
Isoform_66613_10	chr17	-	1173	3	FSM	ENSMUSG00000024177.10	ENSMUST00000236112.2	1176	3	0	3	0	-3	multi-exon	FALSE	canonical	3	304	junction_1	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAATGGTCTACTTA	NA	False	NA	-9	True	ATTAAA	-13	NA	26314447	26310716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26311127_26312590_26313245_26314338
Isoform_66616_11	chr17	-	965	2	FSM	ENSMUSG00000024177.10	ENSMUST00000150280.3	995	2	12	18	0	-18	multi-exon	FALSE	canonical	3	319	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	26314447	26312388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26313245_26314338
Isoform_66617_15	chr17	-	943	6	FSM	ENSMUSG00000073433.12	ENSMUST00000025019.9	1032	6	89	0	89	0	multi-exon	TRUE	canonical	3	81	junction_2	6.72309452558864	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26420235	26418156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
Isoform_66618_11	chr17	-	1020	6	FSM	ENSMUSG00000073433.12	ENSMUST00000025019.9	1032	6	12	0	12	0	multi-exon	FALSE	canonical	3	81	junction_2	6.72309452558864	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26420312	26418156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
Isoform_66621_41	chr17	-	2851	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	-9	-9	0	9	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGCAGTCTGTCTGGA	1919	False	NA	-8	True	AATAAA	-40	NA	26463197	26431674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
Isoform_66622_161	chr17	-	2790	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	54	-11	8	-8	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1982	False	NA	-6	True	AATAAA	-42	NA	26463134	26431672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
Isoform_66624_92	chr17	-	2833	13	FSM	ENSMUSG00000024187.16	ENSMUST00000114988.8	3714	13	-7	888	-7	0	multi-exon	FALSE	canonical	3	154	junction_12	26.8089951736767	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCGTGAGCCTGCAGT	1912	False	NA	-17	True	AATAAA	-31	NA	26463204	26431683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
Isoform_66625_317	chr17	-	2774	13	FSM	ENSMUSG00000024187.16	ENSMUST00000114988.8	3714	13	63	877	8	-8	multi-exon	FALSE	canonical	3	154	junction_12	26.8089951736767	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1982	False	NA	-6	True	AATAAA	-42	NA	26463134	26431672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
Isoform_66626_9	chr17	-	2831	13	NIC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	63.7958440826847	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGAGCCTGCAGTCTGTC	1919	False	NA	-12	True	AATAAA	-36	NA	26463197	26431678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462963
Isoform_66627_14	chr17	-	2784	13	NIC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	63.7958440826847	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1972	False	NA	-6	True	AATAAA	-42	NA	26463144	26431672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462963
Isoform_66628_38	chr17	-	2783	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234554.2	2828	13	26	19	18	0	multi-exon	FALSE	canonical	3	26	junction_11	57.1286924408392	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCGTGAGCCTGCAGT	1946	False	NA	-17	True	AATAAA	-31	NA	26463170	26431683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
Isoform_66631_38	chr17	-	2705	12	FSM	ENSMUSG00000024187.16	ENSMUST00000234175.2	2749	12	52	-8	-22	8	multi-exon	FALSE	canonical	3	10	junction_11	62.3582027847616	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGCAGTCTGTCTGG	1952	False	NA	-9	True	AATAAA	-39	NA	26463164	26431675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462963
Isoform_66632_32	chr17	-	2664	12	FSM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	-21	-14	6	-8	multi-exon	FALSE	canonical	3	29	junction_11	57.0232662389834	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1980	False	NA	-6	True	AATAAA	-42	NA	26463136	26431672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
Isoform_66633_29	chr17	-	2732	12	FSM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	-82	-21	0	-1	multi-exon	FALSE	canonical	3	29	junction_11	57.0232662389834	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTGGATGTCTTTCT	1919	False	NA	1	True	NA	NA	NA	26463197	26431665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
Isoform_66635_24	chr17	-	2766	13	NIC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	58.4886028783956	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTGTCTGGATGTCT	1975	False	NA	-3	True	AATAAA	-45	NA	26463141	26431669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
Isoform_66636_16	chr17	-	2817	13	NIC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	58.4886028783956	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1921	False	NA	-6	True	AATAAA	-42	NA	26463195	26431672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
Isoform_66642_1394	chr17	-	1941	4	NNC	ENSMUSG00000024190.8	novel	1587	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	237.31132856791	1394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCGTGCTTTCTTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	26727446	26724564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_26725625_26725958_26726179_26726548_26726694_26726930
Isoform_66643_56	chr17	-	2005	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	-16	1	-16	0	multi-exon	FALSE	canonical	3	466	junction_2	22.365648262955	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCGTGCTTTCTTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	26727509	26724564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
Isoform_6665_1814	chr10	+	651	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	467	1918	4	45	multi-exon	FALSE	canonical	3	3512	junction_3	116.998575489904	1814	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGAGGCTTTTTTG	1869	False	NA	30	True	AATAAA	-17	NA	75353851	75371297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
Isoform_66653_16	chr17	-	2278	3	NIC	ENSMUSG00000024190.8	novel	1990	4	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	466	junction_1	9.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCCGTGCTTTCTTTG	NA	False	NA	-2	True	AATAAA	-18	NA	26727449	26724565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26726179_26726547_26726694_26726930
Isoform_66656_111	chr17	-	935	5	ISM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	86	-1	7	0	intron_retention	FALSE	canonical	3	797	junction_3	67.913547985656	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9364	False	NA	-17	True	AATAAA	-18	NA	27158431	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857
Isoform_66662_174	chr17	-	700	6	ISM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	123	0	2	0	3prime_fragment	FALSE	canonical	3	511	junction_5	169.834507683215	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9375	False	NA	-17	True	AATAAA	-18	NA	27158420	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290
Isoform_66664_216	chr17	-	650	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	93	-2	-12	2	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTCTGTGACATGGA	9345	False	NA	-15	True	AATAAA	-20	NA	27158450	27156943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
Isoform_66665_18	chr17	-	717	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	24	0	0	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9276	False	NA	-17	True	AATAAA	-18	NA	27158519	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
Isoform_66666_153	chr17	-	599	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	64	-1	-15	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9342	False	NA	-17	True	AATAAA	-18	NA	27158453	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
Isoform_66667_36	chr17	-	639	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	24	-1	2	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9302	False	NA	-17	True	AATAAA	-18	NA	27158493	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
Isoform_66670_85	chr17	-	873	6	FSM	ENSMUSG00000024194.17	ENSMUST00000236326.2	937	6	68	-4	-13	0	multi-exon	FALSE	canonical	3	300	junction_5	250.477144665936	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9344	False	NA	-17	True	AATAAA	-18	NA	27158451	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158343_27158424
Isoform_66676_16	chr17	-	1044	4	ISM	ENSMUSG00000024194.17	ENSMUST00000237609.2	785	5	-34	-1	7	0	intron_retention	FALSE	canonical	3	921	junction_2	26.8865931067677	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9364	False	NA	-17	True	AATAAA	-18	NA	27158431	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857
Isoform_66679_37	chr17	-	810	5	FSM	ENSMUSG00000024194.17	ENSMUST00000237609.2	785	5	-24	-1	1	0	multi-exon	FALSE	canonical	3	511	junction_4	189.078026221981	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9374	False	NA	-17	True	AATAAA	-18	NA	27158421	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290
Isoform_66681_27	chr17	-	757	6	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	300	junction_5	273.070979783645	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9345	False	NA	-17	True	AATAAA	-18	NA	27158450	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290_27158343_27158424
Isoform_66682_14	chr17	-	708	5	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	227	junction_4	311.485954739536	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9342	False	NA	-17	True	AATAAA	-18	NA	27158453	27156945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158424
Isoform_66692_238	chr17	-	1949	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	435	3	4	-1	multi-exon	TRUE	canonical	3	126	junction_3	5.45527267879434	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCGCCTGGCATCTTT	NA	False	NA	-3	True	AATAAA	-17	NA	27247548	27238786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
Isoform_66693_106	chr17	-	1974	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	410	3	-12	-1	multi-exon	FALSE	canonical	3	126	junction_3	5.45527267879434	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCGCCTGGCATCTTT	NA	False	NA	-3	True	AATAAA	-17	NA	27247573	27238786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
Isoform_66696_1348	chr17	-	465	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	30	5	16	0	multi-exon	TRUE	canonical	3	2713	junction_1	153.559977424675	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	1977	False	NA	-3	True	AATAAA	-19	NA	27352860	27341641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
Isoform_66697_87	chr17	-	494	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	1	5	1	0	multi-exon	FALSE	canonical	3	2713	junction_1	153.559977424675	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	1948	False	NA	-3	True	AATAAA	-19	NA	27352889	27341641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
Isoform_66703_1051	chr17	-	2599	9	FSM	ENSMUSG00000044857.9	ENSMUST00000055117.9	2627	9	28	0	28	0	multi-exon	FALSE	canonical	3	431	junction_7	66.5158580715907	1051	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	8021	False	NA	-1	True	AATAAA	-19	NA	27423415	27408573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
Isoform_66718_5	chr17	-	2321	3	NIC	ENSMUSG00000117916.2	novel	2579	3	NA	NA	-4	4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGACTTGGGTTTTTT	6245	False	NA	-5	True	NA	NA	NA	27461637	27454044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_27456112_27458358_27458523_27461547
Isoform_66719_4	chr17	-	2554	3	NNC	ENSMUSG00000117916.2	novel	2579	3	NA	NA	19	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGACTTGGGTTTTTTT	6268	False	NA	-4	True	NA	NA	NA	27461614	27454043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_27456112_27458358_27458523_27461292
Isoform_66720_95	chr17	-	2154	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	1	-6	1	6	multi-exon	FALSE	canonical	3	72	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACTTGGGTTTTTTTG	6250	False	NA	-3	True	NA	NA	NA	27461632	27454042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27456112_27461547
Isoform_66722_3	chr17	-	3438	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	-4	-1285	-4	1285	multi-exon	TRUE	canonical	3	72	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTGGTCACTGTTT	6245	False	NA	NA	False	NA	NA	NA	27461637	27452763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27456112_27461547
Isoform_66723_4	chr17	-	2391	2	NNC	ENSMUSG00000117916.2	novel	2149	2	NA	NA	19	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACTTGGGTTTTTTTG	6268	False	NA	-3	True	NA	NA	NA	27461614	27454042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_27456112_27461292
Isoform_66724_6	chr17	-	3452	10	ISM	ENSMUSG00000063239.18	ENSMUST00000118161.3	4607	11	10408	5	306	3	3prime_fragment	FALSE	canonical	2	11	junction_6	4.15739709641549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCTGCGTGTCCACTG	7108	False	NA	-5	True	AATAAA	-21	NA	27721972	27644877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27721620
Isoform_66725_13	chr17	-	3192	10	ISM	ENSMUSG00000063239.18	ENSMUST00000118161.3	4607	11	10667	6	565	2	3prime_fragment	FALSE	canonical	2	11	junction_6	4.15739709641549	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCCTGCGTGTCCACT	7367	False	NA	-6	True	AATAAA	-20	NA	27721713	27644878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27721620
Isoform_66726_6	chr17	-	3252	10	ISM	ENSMUSG00000063239.18	ENSMUST00000118161.3	4607	11	10608	5	506	3	3prime_fragment	FALSE	canonical	2	11	junction_6	4.15739709641549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCTGCGTGTCCACTG	7308	False	NA	-5	True	AATAAA	-21	NA	27721772	27644877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27721620
Isoform_66728_4	chr17	-	4592	11	FSM	ENSMUSG00000063239.18	ENSMUST00000118161.3	4607	11	10	5	10	3	multi-exon	FALSE	canonical	2	4	junction_10	6.16116872029975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCTGCGTGTCCACTG	NA	False	NA	-5	True	AATAAA	-21	NA	27732370	27644877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27721620_27722508_27731765
Isoform_66729_8	chr17	-	1784	2	ISM	ENSMUSG00000062753.15	ENSMUST00000232203.2	545	5	-10	0	-10	0	intron_retention	FALSE	canonical	3	267	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	False	NA	47	True	AATAAA	-16	NA	27784660	27782744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_27782991_27783122
Isoform_66730_103	chr17	-	609	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	56	197	8	1	multi-exon	FALSE	canonical	3	219	junction_4	17.0934929139717	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCCTCCTTGGGTGGA	NA	False	NA	48	True	AATAAA	-17	NA	27784674	27782743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
Isoform_66731_4	chr17	-	564	5	FSM	ENSMUSG00000062753.15	ENSMUST00000231753.2	563	5	0	-1	0	-1	multi-exon	FALSE	canonical	2	17	junction_3	99.6092365195116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTGCCCTCCTTGGGTG	NA	False	NA	46	True	AATAAA	-15	NA	27784691	27782745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783595_27783725_27784633
Isoform_66736_816	chr17	-	2186	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	29	8	29	-3	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCTCTTTGTTC	NA	False	NA	-26	True	AATAAA	-15	NA	27842440	27798363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
Isoform_66737_160	chr17	-	2209	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	6	8	6	-3	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCTCTTTGTTC	NA	False	NA	-26	True	AATAAA	-15	NA	27842463	27798363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
Isoform_66739_17	chr17	-	2325	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	-110	8	-110	-3	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCTCTTTGTTC	NA	False	NA	-26	True	AATAAA	-15	NA	27842579	27798363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
Isoform_6674_63	chr10	+	2300	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-86	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.4297600962574	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTTTAGTGTCTTG	NA	False	NA	29	True	NA	NA	NA	75399895	75422027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_6675_250	chr10	+	2261	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.4297600962574	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTAGTGTCTTGTGTAT	NA	False	NA	34	True	NA	NA	NA	75399939	75422032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66760_3693	chr17	-	568	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	305	14	0	-8	multi-exon	FALSE	canonical	3	4719	junction_5	828.025700084243	3693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAACATGTCCACTTG	NA	False	NA	NA	False	AATAAA	-6	NA	27854214	27849405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
Isoform_66761_334	chr17	-	622	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	251	14	-50	-8	multi-exon	FALSE	canonical	3	4719	junction_5	828.025700084243	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAACATGTCCACTTG	NA	False	NA	NA	False	AATAAA	-6	NA	27854268	27849405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
Isoform_6677_12	chr10	+	2354	14	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-41	0	intron_retention	FALSE	canonical	0	0	junction_2	97.8393805106013	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGACTTTAGTGTCT	NA	False	NA	27	True	NA	NA	NA	75399940	75422025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421334_75421424_75421539_75421714
Isoform_66771_47	chr17	-	3787	6	NNC	ENSMUSG00000056692.14	novel	3892	5	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	3	33	junction_5	15.957443404255	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCCGCCTTT	NA	False	NA	-22	True	ATTAAA	-13	NA	28039541	27970229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_27970725_27970750_27972970_27986884_27987214_28005044_28005243_28012882_28013038_28039150
Isoform_66773_4	chr17	-	3904	6	NNC	ENSMUSG00000056692.14	novel	3892	5	NA	NA	-26	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	33	junction_5	15.957443404255	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTTTATCCTGTGTG	NA	False	NA	-12	True	ATTAAA	-23	NA	28039648	27970219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_27970725_27970750_27972970_27986884_27987214_28005044_28005243_28012882_28013038_28039150
Isoform_66774_5	chr17	-	3647	5	FSM	ENSMUSG00000056692.14	ENSMUST00000114863.10	3892	5	221	24	48	-13	multi-exon	FALSE	canonical	3	33	junction_4	5.43139024560011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAAAAAACCCCGCC	NA	False	NA	-25	True	ATTAAA	-10	NA	28039378	27970232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27972970_27986884_27987214_28005044_28005243_28012882_28013038_28039150
Isoform_66778_6	chr17	-	3484	4	FSM	ENSMUSG00000056692.14	ENSMUST00000233508.2	1348	4	-115	-2021	-1	-10	multi-exon	FALSE	canonical	2	6	junction_1	17.3781471969828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCCGCCTTT	NA	False	NA	-22	True	ATTAAA	-13	NA	28039541	27970229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_27972970_28005044_28005243_28012882_28013038_28039150
Isoform_6678_107	chr10	+	2256	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	105.112985857687	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTTAGTGTCTTGTGT	NA	False	NA	32	True	NA	NA	NA	75399939	75422030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66780_73	chr17	-	2715	6	NNC	ENSMUSG00000024218.14	novel	3457	6	NA	NA	3	-1	intron_retention	FALSE	non_canonical	2	54	junction_1	40	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGGGTTTCTCTGTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	28128213	28120100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_28120278_28120298_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
Isoform_66781_37	chr17	-	2626	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	-1405	-1	10	-1	multi-exon	FALSE	canonical	3	141	junction_3	9.9373034571759	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGGGTTTCTCTGTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	28128103	28120100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
Isoform_66783_236	chr17	-	1200	6	NNC	ENSMUSG00000024218.14	novel	1220	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	2	54	junction_1	40	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGGGTTTCTCTGTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	28126698	28120100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_28120278_28120298_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
Isoform_66786_7	chr17	-	2100	6	NIC	ENSMUSG00000024218.14	novel	2207	6	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	59.2702286143727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGGGTTTCTCTGTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	28128103	28120100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28127218_28127743
Isoform_66788_13	chr17	-	1980	10	FSM	ENSMUSG00000062859.16	ENSMUST00000042692.13	1989	10	3	6	3	0	multi-exon	FALSE	canonical	3	14	junction_9	11.2787355915107	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGACGGCCATTCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	28299558	28285724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298895_28299280_28299493
Isoform_6679_20	chr10	+	2297	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-86	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	105.112985857687	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTTTAGTGTCTTG	NA	False	NA	29	True	NA	NA	NA	75399895	75422027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66790_3	chr17	-	1725	10	FSM	ENSMUSG00000062859.16	ENSMUST00000114836.9	1752	10	21	6	21	0	multi-exon	FALSE	canonical	3	13	junction_8	13.923955731396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGACGGCCATTCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	28299540	28285724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28299132_28299280_28299493
Isoform_66803_134	chr17	-	2931	7	NIC	ENSMUSG00000024222.18	novel	1414	7	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_6	192.900377282046	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCATTGTTCATGGC	NA	False	NA	-15	True	AATAAA	-14	NA	28637487	28618071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637368
Isoform_66813_1983	chr17	-	3484	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	56	3	0	0	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	1983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28705067	28618070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
Isoform_66814_659	chr17	-	3535	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	6	2	6	1	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATTGTTCATGGCTT	NA	False	NA	-13	True	AATAAA	-16	NA	28705117	28618069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
Isoform_66815_57	chr17	-	3566	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	-26	3	-26	0	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28705149	28618070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
Isoform_6682_89	chr10	+	2239	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	109.844161410238	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTTTAGTGTCTTG	NA	False	NA	29	True	NA	NA	NA	75399939	75422027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75400093_75400671_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66826_107	chr17	-	2887	7	NNC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	204.007080487146	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28637488	28618070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637414
Isoform_6683_20	chr10	+	2286	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-86	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	109.844161410238	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTTAGTGTCTTGTGT	NA	False	NA	32	True	NA	NA	NA	75399895	75422030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75400093_75400671_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66841_667	chr17	-	2455	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	256	1942	-2	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841427	28808563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_66843_115	chr17	-	2519	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	191	1943	-31	-1	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841492	28808564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_66849_36	chr17	-	4395	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	256	2	-2	-2	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28841427	28806623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_6685_34	chr10	+	2240	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.335393294324	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGACTTTAGTGTCT	NA	False	NA	27	True	NA	NA	NA	75399933	75422025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75400093_75400671_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66851_16	chr17	-	2282	15	NIC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	192.858201055298	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841468	28808563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_66854_47	chr17	-	2828	15	FSM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	34	1942	-2	0	multi-exon	FALSE	canonical	3	554	junction_1	84.536943982848	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841427	28808563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_66855_34	chr17	-	2885	15	FSM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	-24	1943	-24	-1	multi-exon	FALSE	canonical	3	554	junction_1	84.536943982848	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841485	28808564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_66868_12	chr17	-	2740	2	ISM	ENSMUSG00000048905.6	ENSMUST00000062357.6	4597	12	15637	-3	6013	3	3prime_fragment	FALSE	canonical	3	14	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCGGATCTTTTCAGGG	NA	False	NA	-1	True	AATAAA	-18	NA	29118661	29115362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_29117898_29118456
Isoform_66869_3	chr17	-	4322	11	NIC	ENSMUSG00000048905.6	novel	4597	12	NA	NA	-4005	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	3.26955654485436	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTGAACCGGATCTTT	NA	False	NA	-7	True	AATAAA	-12	NA	29128679	29115368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_29117898_29118456_29118721_29120104_29120170_29120923_29121050_29121746_29121997_29122220_29122283_29123489_29123625_29124228_29124470_29124613_29124730_29127241_29127362_29128265
Isoform_6687_10	chr10	+	2860	14	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-87	-1	intron_retention	FALSE	canonical	0	0	junction_1	94.4407393789241	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGGACTTTAGTGTC	NA	False	NA	26	True	NA	NA	NA	75399894	75422024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66871_20	chr17	-	986	3	FSM	ENSMUSG00000045378.6	ENSMUST00000051526.6	1019	3	32	1	32	-1	multi-exon	FALSE	canonical	3	18	junction_2	5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTCTGTGTGTCTCTTT	6245	False	NA	1	True	AATAAA	-17	NA	29161206	29152958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29153781_29160215_29160344_29161170
Isoform_66872_5	chr17	-	1429	3	NNC	ENSMUSG00000045378.6	novel	1034	4	NA	NA	140	0	intron_retention	FALSE	canonical	2	3	junction_2	12.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCCTCTGTGTGTCTCT	6353	False	NA	-1	True	AATAAA	-15	NA	29161098	29152960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_29153781_29160215_29160344_29160617
Isoform_66894_1018	chr17	-	3294	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	51	6	1	-6	multi-exon	FALSE	canonical	3	678	junction_3	53.1740471465247	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAACTGTGGTGGATTTC	NA	False	NA	-4	True	AATAAA	-15	NA	29226918	29189859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
Isoform_66895_389	chr17	-	3321	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	24	6	-6	-6	multi-exon	FALSE	canonical	3	678	junction_3	53.1740471465247	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAACTGTGGTGGATTTC	NA	False	NA	-4	True	AATAAA	-15	NA	29226945	29189859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
Isoform_66900_152	chr17	-	3324	14	FSM	ENSMUSG00000024006.18	ENSMUST00000119274.3	3354	14	24	6	-6	-6	multi-exon	FALSE	canonical	3	151	junction_13	173.563487011723	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAACTGTGGTGGATTTC	NA	False	NA	-4	True	AATAAA	-15	NA	29226945	29189859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
Isoform_66901_167	chr17	-	3293	14	FSM	ENSMUSG00000024006.18	ENSMUST00000119274.3	3354	14	55	6	1	-6	multi-exon	FALSE	canonical	3	151	junction_13	173.563487011723	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAACTGTGGTGGATTTC	NA	False	NA	-4	True	AATAAA	-15	NA	29226914	29189859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
Isoform_6692_68	chr10	+	2158	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	89.9111987943607	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75404467	75422034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75404601_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66920_8	chr17	-	2621	14	ISM	ENSMUSG00000024008.17	ENSMUST00000024805.15	5708	21	35406	2356	-18658	4	3prime_fragment	FALSE	canonical	3	19	junction_13	23.8741770823823	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACCCCCCCTCTCCTTTG	8812	False	NA	-5	True	AGTAAA	-18	NA	29421735	29376885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478
Isoform_66922_4	chr17	-	3379	22	NIC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	46.8986943138577	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	8367	False	NA	-9	True	AGTAAA	-14	NA	29457121	29376889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478_29421543_29421828_29421880_29423662_29423723_29428397_29428475_29428663_29428704_29430621_29430726_29444164_29444212_29445166_29445208_29456586
Isoform_66924_189	chr17	-	2435	14	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-4999	2	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_8	10.3443664455472	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGACCCCCCCTCTCCTT	3125	False	NA	-7	True	AGTAAA	-16	NA	29408076	29376887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29408003
Isoform_66925_10	chr17	-	2302	13	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-1296	7	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_12	27.4969695299925	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCCTCTCCTTTGAAA	6828	False	NA	-2	True	AGTAAA	-21	NA	29404373	29376882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29404334
Isoform_66926_7	chr17	-	2458	13	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-1457	2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_12	27.4969695299925	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGACCCCCCCTCTCCTT	6667	False	NA	-7	True	AGTAAA	-16	NA	29404534	29376887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29404334
Isoform_66927_3	chr17	-	2392	13	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-4999	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	29.0692420495157	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGACCCCCCCTCTCCT	3125	False	NA	-8	True	AGTAAA	-15	NA	29408076	29376888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29402896_29403002_29407266_29407371_29408003
Isoform_66928_16	chr17	-	2067	9	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-7989	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	34	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGACCCCCCCTCTCCTT	9056	False	NA	-7	True	AGTAAA	-16	NA	29386468	29376887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29386382
Isoform_66929_3	chr17	-	2161	8	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-7237	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	36.9378960319251	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATAGACCCCCCCTCTC	9808	False	NA	-10	True	AGTAAA	-13	NA	29385716	29376890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385471
Isoform_6693_23	chr10	+	2148	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	102.693604140477	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTTTAGTGTCTTG	NA	False	NA	29	True	NA	NA	NA	75404467	75422027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75404601_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66933_2067	chr17	-	1196	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	241	25	3	0	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGTCTAGTATTGTT	9930	False	NA	-24	True	AATAAA	-23	NA	29482919	29469801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
Isoform_66935_59	chr17	-	1430	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	7	25	7	0	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGTCTAGTATTGTT	9696	False	NA	-24	True	AATAAA	-23	NA	29483153	29469801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
Isoform_66938_29	chr17	-	1293	4	NNC	ENSMUSG00000024007.16	novel	1462	4	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	714.950969569864	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTGTTGTGGTCTAGT	9693	False	NA	-30	True	AATAAA	-17	NA	29483156	29469807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_29470700_29471223_29471293_29480710_29480866_29482979
Isoform_6694_21	chr10	+	2153	14	FSM	ENSMUSG00000006345.11	ENSMUST00000134503.8	2140	14	-22	9	0	0	multi-exon	FALSE	canonical	3	144	junction_1	59.3897965057474	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGACTTTAGTGTCT	NA	False	NA	27	True	NA	NA	NA	75404467	75422025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_75404605_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_6695_19	chr10	+	2148	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	120	junction_2	78.6791101046771	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTAGTGTCTTGTGTAT	NA	False	NA	34	True	NA	NA	NA	75404476	75422032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75404605_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66951_88	chr17	-	1835	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	111	6	-53	-2	multi-exon	FALSE	canonical	3	492	junction_4	200.604458475704	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGTGCAAGCCTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	29566797	29551051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
Isoform_66952_677	chr17	-	1759	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	187	6	23	-2	multi-exon	FALSE	canonical	3	492	junction_4	200.604458475704	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGTGCAAGCCTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	29566721	29551051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
Isoform_66958_114	chr17	-	1786	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	111	0	-53	0	multi-exon	FALSE	canonical	3	643	junction_4	160.665917948029	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566797	29551049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
Isoform_66959_932	chr17	-	1710	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	187	0	23	0	multi-exon	FALSE	canonical	3	643	junction_4	160.665917948029	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566721	29551049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
Isoform_6696_20	chr10	+	2359	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	60.7702044712644	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTAGTGTCTTGTGTAT	NA	False	NA	34	True	NA	NA	NA	75404467	75422032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75404804_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66964_11	chr17	-	4712	5	NIC	ENSMUSG00000024018.19	novel	7117	5	NA	NA	5	1601	intron_retention	FALSE	canonical	3	10	junction_1	117.737791299141	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTGTGACTGAACTTG	NA	False	NA	NA	False	AATAAA	-20	NA	29935977	29914947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_29919227_29923228_29923444_29924244_29924298_29924462_29924558_29935907
Isoform_66966_18	chr17	-	4600	5	FSM	ENSMUSG00000024018.19	ENSMUST00000129091.9	7117	5	6	2511	5	1604	multi-exon	FALSE	canonical	3	16	junction_1	115.181107391794	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGACTGAACTTGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	29935977	29914944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29919227_29923343_29923444_29924244_29924298_29924462_29924558_29935907
Isoform_66967_94	chr17	-	414	4	FSM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	41	942	5	139	multi-exon	FALSE	canonical	3	251	junction_3	23.9072281027215	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTTCCTGCTGACAAGG	NA	False	NA	-3	True	AATAAA	-26	NA	29935977	29923247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29923444_29924244_29924298_29924462_29924558_29935907
Isoform_66968_3	chr17	-	8705	4	FSM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	47	-7355	11	1598	multi-exon	FALSE	canonical	3	251	junction_3	23.9072281027215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTAATTGTGACTGAAC	NA	False	NA	NA	False	AATAAA	-17	NA	29935971	29914950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29923444_29924244_29924298_29924462_29924558_29935907
Isoform_66969_4	chr17	-	4006	17	FSM	ENSMUSG00000043557.17	ENSMUST00000171691.9	8425	17	313	4106	313	0	multi-exon	FALSE	canonical	0	0	junction_8	2.81666358481094	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCAGCACCTTCTTTAC	NA	False	NA	-1	True	ATTAAA	-19	NA	30107369	30051028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30051374_30051886_30051996_30052195_30052327_30056965_30057101_30057410_30057564_30058522_30058547_30058778_30058957_30059770_30059923_30061092_30061381_30061818_30062116_30065294_30065625_30068130_30068401_30068613_30068747_30069465_30069663_30071415_30071591_30076563_30076704_30106420
Isoform_66970_6	chr17	-	4622	12	FSM	ENSMUSG00000062202.15	ENSMUST00000079924.8	2007	12	-95	-2520	-2	5	multi-exon	FALSE	canonical	3	6	junction_1	31.2708773237183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGTTTCATTCCTAG	NA	False	NA	NA	False	ATTAAA	-23	NA	30795238	30436509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30439119_30439318_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
Isoform_66972_42	chr17	-	2284	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	202	4572	-24	3	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	30795260	30439069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
Isoform_66974_20	chr17	-	2477	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	9	4572	9	3	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	30795453	30439069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
Isoform_66975_74	chr17	-	4819	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	224	2015	-2	2	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAGTGTTTCATTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	30795238	30436512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
Isoform_66976_12	chr17	-	5033	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	10	2015	10	2	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAGTGTTTCATTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	30795452	30436512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
Isoform_66977_4	chr17	-	6813	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	243	2	14	-2	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCGAGTTTGTGCCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	30795219	30434499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
Isoform_66981_348	chr17	-	857	7	FSM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	41	-3	-6	-2	multi-exon	FALSE	canonical	3	704	junction_1	947.318613537998	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTGGGCAGCAAGTCC	NA	False	NA	-14	True	AATAAA	-22	NA	30831592	30811836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
Isoform_66988_2526	chr17	-	1898	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	38	7929	-9	1	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTGGGCAGCAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	30831595	30811838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
Isoform_6699_10	chr10	+	2355	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	120	junction_2	79.6660931044854	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTAGTGTCTTGTGTA	NA	False	NA	33	True	NA	NA	NA	75404467	75422031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75404804_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_66990_86	chr17	-	1928	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	8	7929	8	1	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTGGGCAGCAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	30831625	30811838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
Isoform_66991_157	chr17	-	3515	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	37	6313	-10	1612	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAGTCATGAGGCT	NA	False	NA	-8	True	NA	NA	NA	30831596	30810222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
Isoform_67010_15	chr17	-	955	3	ISM	ENSMUSG00000099474.2	ENSMUST00000188852.2	845	4	1728	10	1728	-10	3prime_fragment	FALSE	canonical	3	280	junction_2	76	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGACCGAATTCTTTC	NA	False	NA	-11	True	AATAAA	-15	NA	30844151	30841424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_30841669_30843173_30843588_30843854
Isoform_67012_114	chr17	-	794	4	FSM	ENSMUSG00000099474.2	ENSMUST00000188852.2	845	4	41	10	41	-10	multi-exon	FALSE	canonical	3	145	junction_3	117.235754879739	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGACCGAATTCTTTC	NA	False	NA	-11	True	AATAAA	-15	NA	30845838	30841424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_30841669_30843173_30843588_30843854_30843908_30845755
Isoform_67014_23	chr17	-	846	3	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-706	-10	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_2	123	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGACCGAATTCTTTC	NA	False	NA	-11	True	AATAAA	-15	NA	30846585	30841424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_30841669_30845755_30846170_30846397
Isoform_67015_14	chr17	-	969	3	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-827	-8	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_2	123	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCGAATTCTTTCCT	NA	False	NA	-9	True	AATAAA	-17	NA	30846706	30841422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_30841669_30845755_30846170_30846397
Isoform_67018_35	chr17	-	1137	9	FSM	ENSMUSG00000024033.11	ENSMUST00000024832.9	1191	9	51	3	6	-3	multi-exon	FALSE	canonical	3	52	junction_8	7.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCCTCTGATGTCGC	NA	False	NA	-4	True	AATAAA	-23	NA	31496306	31473995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31492498_31492613_31496175
Isoform_6702_4	chr10	+	628	2	ISM	ENSMUSG00000006344.18	ENSMUST00000218807.2	2051	11	20767	1	6287	1	3prime_fragment	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTTGGTGGTTCTAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	75446201	75451020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_75446373_75450563
Isoform_67023_971	chr17	-	1901	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	458	1795	-10	5	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATGTTCAGCAGCAGCC	NA	False	NA	-12	True	AATAAA	-22	NA	31731267	31715090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
Isoform_67024_200	chr17	-	3697	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	457	0	-11	0	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	False	NA	0	True	ATTAAA	-23	NA	31731268	31713295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
Isoform_67028_21	chr17	-	1931	11	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	142.866686109814	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAATGTTCAGCAGCAG	NA	False	NA	-14	True	AATAAA	-20	NA	31731238	31715092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728742_31728887_31729551_31729621_31731140
Isoform_6703_8	chr10	+	1322	7	FSM	ENSMUSG00000009092.6	ENSMUST00000009236.6	1321	7	-4	3	-4	-3	multi-exon	FALSE	canonical	2	8	junction_5	4.01732359773132	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTGACTCAATATGTT	NA	False	NA	NA	False	NA	NA	NA	75729242	75731772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_75729352_75729452_75729519_75729603_75729678_75729800_75729895_75730265_75730462_75730872_75730964_75731080
Isoform_67036_55	chr17	-	2439	17	FSM	ENSMUSG00000024039.16	ENSMUST00000067801.14	2533	17	73	21	0	1	multi-exon	FALSE	canonical	3	42	junction_16	84.4695766237762	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTCGTGTCGACCTT	1945	False	NA	-20	True	NA	NA	NA	31856139	31831617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
Isoform_67037_450	chr17	-	2448	17	FSM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	34	3744	0	2	multi-exon	FALSE	canonical	3	120	junction_2	62.6156118212543	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGTCGACCTTATTTCC	1945	False	NA	-14	True	NA	NA	NA	31856139	31831611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
Isoform_67038_74	chr17	-	2466	17	FSM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	10	3750	10	1	multi-exon	FALSE	canonical	3	120	junction_2	62.6156118212543	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTCGTGTCGACCTT	1921	False	NA	-20	True	NA	NA	NA	31856163	31831617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
Isoform_67044_16	chr17	-	2435	16	FSM	ENSMUSG00000024039.16	ENSMUST00000118504.9	2474	16	37	2	-2	-1	multi-exon	FALSE	canonical	3	42	junction_15	69.6264317626575	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1909	False	NA	-18	True	NA	NA	NA	31856175	31831615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
Isoform_67045_67	chr17	-	2403	16	FSM	ENSMUSG00000024039.16	ENSMUST00000118504.9	2474	16	73	-2	0	2	multi-exon	FALSE	canonical	3	42	junction_15	69.6264317626575	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGTCGACCTTATTTCC	1945	False	NA	-14	True	NA	NA	NA	31856139	31831611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
Isoform_67047_497	chr17	-	2400	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	0	3	0	1	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTCGTGTCGACCTT	1945	False	NA	-20	True	NA	NA	NA	31856139	31831617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
Isoform_67057_88	chr17	-	933	9	FSM	ENSMUSG00000061613.14	ENSMUST00000237323.2	975	9	43	-1	-9	0	multi-exon	FALSE	canonical	3	177	junction_6	2395.95355495469	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877686	31866054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31871475_31871543_31873952_31874041_31877626
Isoform_6706_2211	chr10	+	667	4	FSM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	294	-22	294	0	multi-exon	FALSE	canonical	3	15821	junction_1	833.259196702256	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7240	False	NA	23	True	ATTAAA	-20	NA	75771700	75773581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_75771839_75772071_75772280_75773140_75773289_75773408
Isoform_67060_3030	chr17	-	907	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	138	1	1	0	multi-exon	FALSE	canonical	3	4626	junction_6	706.208473585007	3030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877728	31866055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
Isoform_67064_69	chr17	-	4131	7	NIC	ENSMUSG00000061613.14	novel	975	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	5175	junction_5	505.802223096033	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877686	31866055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31874041_31877626
Isoform_67065_472	chr17	-	887	8	FSM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	35	1	4	0	multi-exon	FALSE	canonical	3	1007	junction_5	2353.82216310201	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877708	31866055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
Isoform_67066_50	chr17	-	820	7	NIC	ENSMUSG00000061613.14	novel	975	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	95	junction_5	2338.47820886433	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877708	31866055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31873952_31874041_31877626
Isoform_6707_7581	chr10	+	634	4	FSM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	327	-22	327	0	multi-exon	FALSE	canonical	3	15821	junction_1	833.259196702256	7581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_75771839_75772071_75772280_75773140_75773289_75773408
Isoform_67074_234	chr17	-	3439	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	8	1074	-3	-1074	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTTTTTCTATTTTGT	NA	False	NA	-20	True	TATAAA	-17	NA	32074770	32064297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
Isoform_67077_48	chr17	-	3560	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-48	1009	-48	-1009	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGAAGTTGTCCCCATGT	NA	False	NA	-2	True	NA	NA	NA	32074826	32064232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
Isoform_67078_21	chr17	-	4525	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-26	22	-26	-22	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCTTGACTTACCCTTG	NA	False	NA	-26	True	AATAAA	-12	NA	32074804	32063245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
Isoform_67088_61	chr17	-	1714	9	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-8	176	at_least_one_novel_splicesite	FALSE	non_canonical	3	53	junction_1	394.529129944799	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTGCCTGTGCATGTG	NA	False	NA	-3	True	ATTAAA	-31	NA	32253490	32164879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_32164934_32164957_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_67090_583	chr17	-	1556	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-5	1316	-5	-3	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTGGGTTTAGGAAGT	NA	False	NA	-16	True	AATAAA	-27	NA	32253487	32165058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_67100_26	chr17	-	1716	8	NNC	ENSMUSG00000002076.13	novel	2867	8	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	393.49786712074	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTGGGTTTAGGAAGT	NA	False	NA	-16	True	AATAAA	-27	NA	32253475	32165058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
Isoform_67102_56	chr17	-	1409	7	NIC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	97	junction_4	419.803393136464	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGGTTTAGGAAGTGG	NA	False	NA	-14	True	AATAAA	-29	NA	32253488	32165056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
Isoform_67106_35	chr17	-	1613	8	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-11	176	at_least_one_novel_splicesite	FALSE	non_canonical	3	53	junction_1	471.788607106952	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTGCCTGTGCATGTG	NA	False	NA	-3	True	ATTAAA	-31	NA	32253493	32164879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_32164934_32164957_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_67107_377	chr17	-	1457	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	21	1	-8	-1	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGGTTTAGGAAGTGG	NA	False	NA	-14	True	AATAAA	-29	NA	32253490	32165056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_67112_32	chr17	-	1303	6	NIC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	514.177634675022	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGGGTTTAGGAAGTG	NA	False	NA	-15	True	AATAAA	-28	NA	32253487	32165057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32165786_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
Isoform_67125_45	chr17	-	8049	33	FSM	ENSMUSG00000038146.9	ENSMUST00000087723.5	8016	33	-38	5	-38	-5	multi-exon	TRUE	canonical	3	42	junction_20	15.8899720244404	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGTGTCTGGTTTCTGT	6001	False	NA	-6	True	AATAAA	-14	NA	32385864	32339798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
Isoform_67127_5	chr17	-	1552	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	46	-7	-40	7	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGTTTAAGTCTTCC	1040	False	NA	NA	False	CATAAA	-33	NA	32408477	32403626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
Isoform_67128_4	chr17	-	1566	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	86	-61	0	61	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACTTCAATTTAAATGT	1080	False	NA	NA	False	AATATA	-15	NA	32408437	32403572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
Isoform_67152_15	chr17	-	5836	21	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_20	71.4790004127086	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCTGTCTCCCTGAAA	NA	False	NA	-5	True	AATAAA	-18	NA	32503097	32415248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
Isoform_67153_63	chr17	-	5977	21	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	87	junction_20	62.1417733895646	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503694	32415249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
Isoform_67154_15	chr17	-	5681	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_19	65.4612866922249	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCTGTCTCCCTGAAA	NA	False	NA	-5	True	AATAAA	-18	NA	32503102	32415248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
Isoform_67155_100	chr17	-	5817	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	48.2561838501388	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503694	32415249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
Isoform_67166_41	chr17	-	6084	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	87	junction_19	60.2163228715122	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503702	32415249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
Isoform_67167_10	chr17	-	5785	19	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	0	-1	intron_retention	FALSE	canonical	3	24	junction_18	63.403956725074	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCTGTCTCCCTGAAA	NA	False	NA	-5	True	AATAAA	-18	NA	32503107	32415248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
Isoform_67169_43	chr17	-	5923	19	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	148	junction_18	43.3756203926174	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503701	32415249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
Isoform_6718_5	chr10	+	1847	6	ISM	ENSMUSG00000033255.9	ENSMUST00000099577.4	2838	14	39297	4	19725	-4	3prime_fragment	FALSE	canonical	2	3	junction_3	1.89736659610103	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGGTGTCTTGA	NA	False	NA	5	True	AATAAA	-18	NA	75829644	75845421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_75829767_75831613_75831765_75836222_75836392_75840528_75840745_75841823_75841927_75844335
Isoform_6720_9	chr10	+	4846	3	FSM	ENSMUSG00000049764.9	ENSMUST00000218627.2	378	3	-38	-4430	-38	-416	multi-exon	FALSE	canonical	3	22	junction_2	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTCTGTCTTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	75868445	75878652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_75868584_75868786_75868910_75874067
Isoform_67207_355	chr17	-	3701	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	27	3	1	-1	multi-exon	TRUE	canonical	3	426	junction_6	74.0811964579343	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTGTGTTCATTAAT	NA	False	NA	-4	True	AATAAA	-13	NA	32540132	32522648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
Isoform_6721_168	chr10	+	4662	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	20	415	20	-415	multi-exon	FALSE	canonical	3	112	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTCTGTCTTTTTTT	NA	False	NA	14	True	AATAAA	-16	NA	75868507	75878653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_75868584_75874067
Isoform_67211_32	chr17	-	3736	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	-9	4	-9	-2	multi-exon	FALSE	canonical	3	426	junction_6	74.0811964579343	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540168	32522649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
Isoform_67215_13	chr17	-	4102	13	FSM	ENSMUSG00000024045.7	ENSMUST00000237103.2	4071	13	-33	2	1	-2	multi-exon	FALSE	canonical	3	426	junction_6	76.8282265114124	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540132	32522649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
Isoform_6723_79	chr10	+	4807	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	19	271	19	-271	multi-exon	FALSE	canonical	3	112	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCATTTTTAAATCTTA	NA	False	NA	10	True	AATAAA	-18	NA	75868506	75878797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_75868584_75874067
Isoform_67238_11	chr17	-	2831	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_5	143.565547143215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569569	32540398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_6724_21	chr10	+	5035	2	NIC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-23	-415	intron_retention	FALSE	canonical	3	22	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTCTGTCTTTTTTT	NA	False	NA	14	True	AATAAA	-16	NA	75868460	75878653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_75868910_75874067
Isoform_67244_23	chr17	-	2146	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	35	junction_6	121.469929931449	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32540398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_67246_203	chr17	-	1985	15	FSM	ENSMUSG00000002625.11	ENSMUST00000236503.2	1987	15	3	-1	3	0	multi-exon	TRUE	canonical	3	144	junction_11	68.7455007804221	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569566	32540397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_67248_491	chr17	-	2087	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	15	0	3	0	multi-exon	FALSE	canonical	3	272	junction_6	38.0609912279546	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569566	32540397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_67249_17	chr17	-	1900	14	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	101.600738477491	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32540398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557430_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_67250_18	chr17	-	3487	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	35	junction_5	130.49218054609	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32540398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_67251_19	chr17	-	3575	14	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-1	0	intron_retention	FALSE	canonical	3	35	junction_5	126.05300847955	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569552	32540398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_67254_26	chr17	-	3530	13	FSM	ENSMUSG00000002625.11	ENSMUST00000236039.2	3513	13	-17	0	3	0	multi-exon	FALSE	canonical	3	272	junction_5	37.9549257526462	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569566	32540397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_67258_16	chr17	-	4396	12	FSM	ENSMUSG00000002625.11	ENSMUST00000236105.2	4381	12	-15	0	3	0	multi-exon	FALSE	canonical	3	339	junction_7	23.6967759427869	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569566	32540397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_67264_12	chr17	-	4159	9	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	15	5	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	72.0797084830398	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCAGTGTGTTTTTTTC	NA	False	NA	-5	True	ATTAAA	-29	NA	32583422	32573023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576956_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
Isoform_67266_144	chr17	-	4147	9	FSM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	15	-584	15	-4	multi-exon	FALSE	canonical	3	73	junction_5	52.6413276333339	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCCCAGGGCAAACAGC	NA	False	NA	-20	True	ATTAAA	-14	NA	32583422	32573038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
Isoform_67270_139	chr17	-	3770	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	27.8384552703043	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCCCAGGGCAAACAG	NA	False	NA	-21	True	ATTAAA	-13	NA	32583436	32573039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32583155
Isoform_67280_123	chr17	-	3066	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	13	7772	13	-16	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCAAAAAAAAAAAAACTTT	NA	False	NA	NA	False	AATAAA	-29	NA	33007248	32992241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
Isoform_67281_3	chr17	-	3542	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	-24	7333	-24	423	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTAGTATTTATGTG	NA	False	NA	NA	False	CATAAA	-11	NA	33007285	32991802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
Isoform_67283_13	chr17	-	10814	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	35	2	-2	-2	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTCTTTGGTGCTGTC	NA	False	NA	-7	True	NA	NA	NA	33007226	32984471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
Isoform_67285_16	chr17	-	2189	4	FSM	ENSMUSG00000055202.12	ENSMUST00000200914.5	3536	4	11	1336	11	394	multi-exon	FALSE	canonical	3	5	junction_3	3.09120616516523	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4495	False	NA	NA	False	NA	NA	NA	33028894	33015985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33017848_33019360_33019422_33019785_33019913_33028755
Isoform_67287_15	chr17	-	4135	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	0	1877	0	-1871	multi-exon	FALSE	canonical	3	24	junction_2	7.93025150224688	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTATCTTTGATTT	NA	False	NA	-17	True	NA	NA	NA	33049235	33036299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33040074_33040751_33040813_33041047_33041175_33049062
Isoform_67289_6	chr17	-	4254	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	4	1754	4	-1748	multi-exon	FALSE	canonical	3	24	junction_2	7.93025150224688	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATACATATACATAC	NA	False	NA	NA	False	AATAAA	-18	NA	33049231	33036176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33040074_33040751_33040813_33041047_33041175_33049062
Isoform_67290_192	chr17	-	2509	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	46	2782	-6	1861	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTCCTTTGTCATGGT	NA	False	NA	-7	True	NA	NA	NA	33110570	33100974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
Isoform_67291_90	chr17	-	2536	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	17	2784	17	1859	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTCCTTTGTCATG	NA	False	NA	-9	True	NA	NA	NA	33110599	33100976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
Isoform_67293_11	chr17	-	3203	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	17	2117	17	-2108	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGTGAGTGTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	33110599	33100309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
Isoform_67297_212	chr17	-	1728	13	FSM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	24	0	1	0	multi-exon	FALSE	canonical	2	129	junction_12	13.5285192587117	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	-7	True	AATAAA	-29	NA	33166352	33143661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
Isoform_67298_10	chr17	-	1820	12	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	0	2	intron_retention	FALSE	canonical	2	129	junction_11	13.6369696835023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCATCAGACCAAAATTT	NA	False	NA	-5	True	AATAAA	-31	NA	33166354	33143659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151657_33160029_33160175_33165778_33165978_33166286
Isoform_6730_258	chr10	+	6431	29	FSM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	-5	1	-5	0	multi-exon	FALSE	canonical	3	127	junction_5	51.5606810130608	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGCCTTAGTTTTATG	NA	False	NA	11	True	AATAAA	-17	NA	76304755	76351690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
Isoform_67300_7	chr17	-	1845	12	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	1	0	intron_retention	FALSE	canonical	2	129	junction_11	14.0806414204012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGAGTGACTATGAGC	NA	False	NA	-20	True	AATAAA	-16	NA	33166352	33143674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_33143929_33144297_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
Isoform_67302_160	chr17	-	3410	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGTTCAAATGAGATTT	2756	False	NA	-16	True	NA	NA	NA	33252379	33235836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
Isoform_67305_81	chr17	-	3540	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	4	0	4	0	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	33474115	33458691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
Isoform_67308_6	chr17	-	3761	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	-3	-214	-3	214	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	33474122	33458477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
Isoform_67311_14	chr17	-	3771	3	NIC	ENSMUSG00000094441.3	novel	3544	4	NA	NA	10	0	intron_retention	FALSE	canonical	3	111	junction_2	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	33474109	33458691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_33461925_33462686_33463109_33473993
Isoform_67312_7	chr17	-	3615	5	FSM	ENSMUSG00000003929.12	ENSMUST00000235063.2	812	5	5	-2808	5	1871	multi-exon	FALSE	canonical	2	6	junction_3	15.2540978100968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTACTTGTTTTAAATG	NA	False	NA	NA	False	ATTAAA	-17	NA	33577837	33551475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33577707
Isoform_67314_25	chr17	-	3482	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	-2	3159	-2	1872	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTACTTGTTTTAAATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	33577854	33551474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
Isoform_67315_5	chr17	-	4015	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	2	2622	-2	2409	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGTATTTTGTACT	NA	False	NA	-3	True	TATAAA	-18	NA	33577850	33550937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
Isoform_67318_5	chr17	-	6633	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	0	6	0	-6	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAATTCTGTTGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	33577852	33548321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
Isoform_67319_15	chr17	-	2676	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	50	-67	14	67	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGCTCAATAACATTGG	NA	False	NA	NA	False	AATAAA	-11	NA	33613565	33599161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
Isoform_67320_14	chr17	-	2636	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	4	19	4	-19	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTCATTCCCACAC	NA	False	NA	NA	False	AATAAA	-16	NA	33613611	33599247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
Isoform_67321_16	chr17	-	2519	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	25	115	7	-115	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTTCATGTAGTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	33613590	33599343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
Isoform_67322_10	chr17	-	1310	3	FSM	ENSMUSG00000055240.18	ENSMUST00000174512.4	6095	3	-14	4799	4	272	multi-exon	FALSE	canonical	3	44	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAATAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	33613611	33604408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33605442_33605658_33605786_33613461
Isoform_67350_2553	chr17	-	2334	16	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	491.668786436108	2553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTTGCCTTTTTTGT	5769	False	NA	-7	True	AATAAA	-14	NA	33904364	33865211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
Isoform_67351_90	chr17	-	2397	16	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-34	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	491.668786436108	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTTGCCTTTTTTGT	5706	False	NA	-7	True	AATAAA	-14	NA	33904427	33865211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
Isoform_67359_1219	chr17	-	2464	15	NIC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_12	499.910221531663	1219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTTGCCTTTTTTGT	5756	False	NA	-7	True	AATAAA	-14	NA	33904377	33865211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
Isoform_67362_79	chr17	-	2514	15	NIC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-34	1	intron_retention	FALSE	canonical	0	0	junction_12	499.910221531663	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTTGCCTTTTTTGT	5706	False	NA	-7	True	AATAAA	-14	NA	33904427	33865211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
Isoform_6737_30	chr10	+	4327	23	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	11942	1	-249	0	3prime_fragment	FALSE	canonical	3	162	junction_1	37.3435303124698	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGCCTTAGTTTTATG	NA	False	NA	11	True	AATAAA	-17	NA	76316702	76351690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
Isoform_67380_10	chr17	-	1507	6	NIC	ENSMUSG00000079557.12	novel	1398	5	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	123.474045855799	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTATGTTTCTAAGCTG	2684	False	NA	-14	True	AATAAA	-30	NA	33937636	33910491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33934916_33935037_33937519
Isoform_67381_288	chr17	-	1400	5	FSM	ENSMUSG00000079557.12	ENSMUST00000172767.9	1398	5	8	-10	-5	10	multi-exon	FALSE	canonical	3	227	junction_1	25.5196003103497	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGTTCCAAGCGAGTG	2684	False	NA	-1	True	AATAAA	-43	NA	33937636	33910478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
Isoform_67382_30	chr17	-	1439	5	FSM	ENSMUSG00000079557.12	ENSMUST00000173015.8	1418	5	-22	1	-5	-1	multi-exon	FALSE	canonical	3	31	junction_1	109.184476918654	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATGTTTCTAAGCTGTT	2684	False	NA	-12	True	AATAAA	-32	NA	33937636	33910489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33911178_33915010_33915221_33921986_33922183_33928718_33928947_33937519
Isoform_67384_4	chr17	-	5260	4	FSM	ENSMUSG00000079557.12	ENSMUST00000173329.8	2566	4	-5	-2689	-5	-13	multi-exon	FALSE	canonical	3	268	junction_3	10.1434160364686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGACGCATCAGTTATGT	2684	False	NA	-24	True	AATAAA	-20	NA	33937636	33910501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33915221_33921986_33922183_33928718_33928947_33937519
Isoform_67388_525	chr17	-	1792	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	200	4117	-24	149	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCACTCAGCTTCTGTC	NA	False	NA	-10	True	ACTAAA	-27	NA	33979304	33965574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
Isoform_6739_10	chr10	+	4460	23	NIC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	59.3729632099542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76316941	76351691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_76317346_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
Isoform_67390_67	chr17	-	1949	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	47	4113	1	153	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCAGCTTCTGTCTTCT	NA	False	NA	-6	True	ACTAAA	-31	NA	33979457	33965570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
Isoform_67392_45	chr17	-	2721	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	202	3186	-22	1080	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTTGGGGTGGATTTT	NA	False	NA	NA	False	TTTAAA	-37	NA	33979302	33964643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
Isoform_67407_79	chr17	-	1909	7	FSM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	249	1150	-38	8	multi-exon	FALSE	canonical	3	124	junction_1	6.14862224856557	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTCTGTTGTTTCA	NA	False	NA	-3	True	AATAAA	-16	NA	34000555	33993873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
Isoform_67408_118	chr17	-	1871	7	FSM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	287	1150	0	8	multi-exon	FALSE	canonical	3	124	junction_1	6.14862224856557	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTCTGTTGTTTCA	NA	False	NA	-3	True	AATAAA	-16	NA	34000517	33993873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
Isoform_67415_4388	chr17	-	314	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	67	1	-1	-1	multi-exon	FALSE	canonical	3	11527	junction_1	4307.03060897722	4388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGTCTAGAAATTGGT	NA	False	NA	-26	True	AATAAA	-13	NA	34043469	34042024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
Isoform_67419_1279	chr17	-	310	4	FSM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	67	15	-1	-1	multi-exon	FALSE	canonical	3	4589	junction_1	7337.59253585413	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGTCTAGAAATTGGT	NA	False	NA	-26	True	AATAAA	-13	NA	34043469	34042024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34042091_34042170_34042305_34043272_34043321_34043407
Isoform_67433_1364	chr17	-	2288	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	61	8	-4	1	multi-exon	FALSE	canonical	1	168	junction_4	135.039586788467	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTCTTGTTTGTTTT	9754	False	NA	-15	True	AATAAA	-18	NA	34109574	34094640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
Isoform_67434_199	chr17	-	2338	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	11	8	11	1	multi-exon	FALSE	canonical	1	168	junction_4	135.039586788467	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTCTTGTTTGTTTT	9704	False	NA	-15	True	AATAAA	-18	NA	34109624	34094640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
Isoform_67445_5	chr17	-	847	2	FSM	ENSMUSG00000092564.3	ENSMUST00000172526.3	978	2	-9	140	-9	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTATATTCCCTTTTA	1245	False	NA	-7	True	AATAAA	-21	NA	34128161	34127157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34127561_34127717
Isoform_67446_3	chr17	-	542	2	FSM	ENSMUSG00000092564.3	ENSMUST00000174467.2	462	2	-85	5	23	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTATTTATATTCCCTT	1138	False	NA	-10	True	AATAAA	-18	NA	34128268	34127160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34127561_34128126
Isoform_67447_651	chr17	-	690	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	18	99	0	-1	multi-exon	FALSE	canonical	3	1067	junction_1	64.8194072447099	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTACTTTACAGCCAGTC	NA	False	NA	-16	True	AATAAA	-16	NA	34159299	34157893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
Isoform_67451_37	chr17	-	562	5	FSM	ENSMUSG00000024309.16	ENSMUST00000174048.8	560	5	-3	1	2	-1	multi-exon	FALSE	canonical	3	138	junction_4	444.939602642876	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTACTTTACAGCCAGTC	NA	False	NA	-16	True	AATAAA	-16	NA	34159302	34157893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159140_34159270
Isoform_67464_16054	chr17	-	544	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	16	0	-1	0	multi-exon	FALSE	canonical	3	20050	junction_4	1387.25833481007	16054	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174635	34170972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
Isoform_67475_70	chr17	-	1553	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	7	10	-1	-3	multi-exon	FALSE	canonical	3	30	junction_6	28.0698836361489	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGGGTCACTATGCTG	NA	False	NA	-14	True	AATAAA	-22	NA	34219256	34215000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
Isoform_67476_3	chr17	-	1612	8	NIC	ENSMUSG00000061232.17	novel	1570	8	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	35.178843363706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGGGTCACTATGC	NA	False	NA	-16	True	AATAAA	-20	NA	34219257	34215002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34219038_34219167
Isoform_67477_3	chr17	-	1556	8	FSM	ENSMUSG00000061232.17	ENSMUST00000238098.2	1065	8	-31	-460	-1	2	multi-exon	FALSE	canonical	0	0	junction_6	35.1840641107155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTGTGTGTATCTGTT	NA	False	NA	-2	True	AATAAA	-34	NA	34219256	34214988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218485_34218707_34218978_34219167
Isoform_67478_68	chr17	-	1591	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	65	-37	-1	1	multi-exon	FALSE	canonical	3	30	junction_6	28.3196045170126	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGCTGTGTGTATCTGT	NA	False	NA	-3	True	AATAAA	-33	NA	34219256	34214989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
Isoform_67479_13	chr17	-	1759	7	NIC	ENSMUSG00000061232.17	novel	1619	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	37	junction_6	25.5907969568923	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCAGAATCTGGGTCA	NA	False	NA	-22	True	AATAAA	-14	NA	34219256	34215008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218978_34219167
Isoform_67481_14	chr17	-	1806	6	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	25	294	-3	-2	intron_retention	FALSE	canonical	3	63	junction_3	8.8090862182181	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243629	34240059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262
Isoform_67482_231	chr17	-	1715	7	FSM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	25	294	-3	-2	multi-exon	FALSE	canonical	3	63	junction_3	8.5764535535124	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243629	34240059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_67484_8	chr17	-	2099	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	78	junction_2	4.12310562561766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243629	34240059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34240458_34240656_34240931_34241269_34242169_34242266_34242428_34243262
Isoform_67485_20	chr17	-	2008	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	78	junction_2	4.01995024844836	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243629	34240059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34240458_34240656_34240931_34241269_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_67486_4	chr17	-	1327	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	33.0175710796539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243632	34240060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34240458_34240656_34240931_34241952_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_67487_13	chr17	-	2050	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	1	-2	intron_retention	FALSE	canonical	3	63	junction_2	9.32523458149981	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243625	34240059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34240458_34240656_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_67489_16	chr17	-	2346	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	80	junction_2	3.11247489949718	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243629	34240060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34240458_34240656_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_67490_30	chr17	-	1230	7	ISM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-4	0	0	0	intron_retention	FALSE	canonical	3	139	junction_4	22.7406879598857	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379
Isoform_67491_29	chr17	-	1130	8	ISM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-4	0	0	0	intron_retention	FALSE	canonical	3	114	junction_7	29.9400762067385	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596
Isoform_67492_8	chr17	-	990	9	NIC	ENSMUSG00000073422.12	novel	965	9	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	13	junction_8	57.8748650106417	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246954
Isoform_67493_123	chr17	-	969	9	FSM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-4	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	37.2237743250198	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
Isoform_67494_11	chr17	-	1306	6	FSM	ENSMUSG00000073422.12	ENSMUST00000170644.8	1293	6	-10	-3	0	0	multi-exon	FALSE	canonical	3	162	junction_4	17.6748408762286	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247030	34245006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34246076_34246176_34246270_34246379
Isoform_67495_3	chr17	-	1047	8	NIC	ENSMUSG00000073422.12	novel	965	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	92	junction_7	39.1329497367888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCCGGTTCTTCTTGTG	NA	False	NA	-3	True	AATAAA	-21	NA	34247034	34245008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
Isoform_67496_3	chr17	-	849	7	NIC	ENSMUSG00000073422.12	novel	965	9	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	56.9785534701922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCCGGTTCTTCTTGTG	NA	False	NA	-3	True	AATAAA	-21	NA	34247034	34245008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34245200_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
Isoform_67497_3	chr17	-	1691	3	FSM	ENSMUSG00000073422.12	ENSMUST00000174029.8	459	3	-1108	-124	0	0	multi-exon	FALSE	canonical	3	198	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34245445_34245636_34245680_34245824
Isoform_67499_3	chr17	-	1300	7	FSM	ENSMUSG00000073422.12	ENSMUST00000174399.8	728	7	-197	-375	0	0	multi-exon	FALSE	canonical	3	114	junction_6	32.3389170436419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596
Isoform_67500_7	chr17	-	1139	8	FSM	ENSMUSG00000073422.12	ENSMUST00000237759.2	1133	8	-6	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	39.6227104533936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
Isoform_67501_3	chr17	-	1599	4	NIC	ENSMUSG00000073422.12	novel	1133	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	162	junction_3	19.4422220952236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247043	34245006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34245445_34245636_34245680_34245824_34246076_34246176
Isoform_67502_3	chr17	-	1479	5	NIC	ENSMUSG00000073422.12	novel	1293	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	162	junction_3	17.6210101867061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247034	34245007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34245445_34245636_34245680_34245824_34246076_34246176_34246270_34246379
Isoform_67507_47	chr17	-	2448	6	FSM	ENSMUSG00000024327.17	ENSMUST00000170491.8	2433	6	-14	-1	0	1	multi-exon	FALSE	canonical	3	568	junction_4	31.8282893036996	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34250636	34247245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
Isoform_67515_970	chr17	-	2387	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-70	3	-8	1	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34250664	34247245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
Isoform_67518_70	chr17	-	2749	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-432	3	-370	1	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34251026	34247245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
Isoform_67527_62	chr17	-	2099	8	FSM	ENSMUSG00000024327.17	ENSMUST00000169397.9	1550	8	-25	-524	-5	1	multi-exon	FALSE	canonical	3	49	junction_7	197.419371296905	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34250661	34247245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797_34250237_34250521
Isoform_67529_45	chr17	-	1660	7	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	218.983763984659	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34250661	34247245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250521
Isoform_6753_580	chr10	+	3104	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	11	1552	6	694	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAACCACCTGCCTTCC	NA	False	NA	-1	True	AATAAA	-7	NA	76367451	76389761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
Isoform_67554_125	chr17	-	3735	13	ISM	ENSMUSG00000024335.21	ENSMUST00000154232.9	4520	14	1078	1	-844	-1	3prime_fragment	FALSE	canonical	3	88	junction_10	131.526586877162	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGAGTTAGTTTTCTT	9361	False	NA	-17	True	AATAAA	-15	NA	34338307	34331004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579
Isoform_67562_38	chr17	-	4739	14	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	2	-1	intron_retention	FALSE	canonical	3	88	junction_10	145.754555786584	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGAGTTAGTTTTCTT	6096	False	NA	-17	True	AATAAA	-15	NA	34341572	34331004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
Isoform_6757_33	chr10	+	6325	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	1	-1659	1	0	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAGTCTTCCTTTTGCA	NA	False	NA	10	True	AATAAA	-17	NA	76367441	76392972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
Isoform_67570_911	chr17	-	3640	12	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	2417	8	-841	-1	3prime_fragment	FALSE	canonical	3	318	junction_10	50.8649158990899	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGAGTTAGTTTTCTT	9364	False	NA	-17	True	AATAAA	-15	NA	34338304	34331004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
Isoform_6758_30	chr10	+	2954	21	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	6	694	combination_of_known_splicesites	FALSE	canonical	2	7	junction_14	51.7483091511211	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAACCACCTGCCTTCC	NA	False	NA	-1	True	AATAAA	-7	NA	76367451	76389761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
Isoform_67585_73	chr17	-	4366	13	FSM	ENSMUSG00000024335.21	ENSMUST00000025193.14	4657	13	283	8	283	-1	multi-exon	FALSE	canonical	3	100	junction_12	100.678634774216	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGAGTTAGTTTTCTT	6377	False	NA	-17	True	AATAAA	-15	NA	34341291	34331004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
Isoform_67586_67	chr17	-	4676	13	FSM	ENSMUSG00000024335.21	ENSMUST00000025193.14	4657	13	-20	1	-1	-1	multi-exon	TRUE	canonical	3	100	junction_12	100.678634774216	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	6074	False	NA	-10	True	AATAAA	-22	NA	34341594	34330997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
Isoform_67615_13	chr17	-	867	6	FSM	ENSMUSG00000096727.4	ENSMUST00000174576.4	1352	6	425	60	-1	-6	multi-exon	FALSE	canonical	2	4	junction_1	3.70944739819828	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAATCATTA	NA	False	NA	NA	False	NA	NA	NA	34406313	34401020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34401326_34402062_34402205_34402588_34402719_34403255_34403388_34404703_34404772_34406223
Isoform_67616_8	chr17	-	1121	5	FSM	ENSMUSG00000036594.16	ENSMUST00000040655.14	1128	5	0	7	0	-7	multi-exon	FALSE	canonical	2	6	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGGTTTGGTTTGGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	34506797	34501724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34501998_34502128_34502304_34502548_34502831_34503261_34503511_34506655
Isoform_67617_655	chr17	-	1124	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	100	14	71	-14	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACGTTGCTGGGAAGTCT	895	False	NA	-37	True	NA	NA	NA	34822564	34820078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
Isoform_67618_119	chr17	-	1233	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	1	4	1	-4	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAGTCTCCCCAGTCTC	796	False	NA	-27	True	NA	NA	NA	34822663	34820068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
Isoform_67621_23	chr17	-	1257	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	-27	8	-27	-8	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGGAAGTCTCCCCAG	768	False	NA	-31	True	NA	NA	NA	34822691	34820072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
Isoform_67626_24	chr17	-	1282	4	FSM	ENSMUSG00000015478.14	ENSMUST00000174475.8	850	4	-213	-219	72	-4	multi-exon	FALSE	canonical	3	1022	junction_3	37.7211994624891	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAGTCTCCCCAGTCTC	896	False	NA	-27	True	NA	NA	NA	34822563	34820068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34820963_34821058_34821172_34821264_34821284_34822307
Isoform_67628_9	chr17	-	1778	8	FSM	ENSMUSG00000015474.17	ENSMUST00000171376.8	1750	8	-30	2	-28	-2	multi-exon	FALSE	canonical	3	52	junction_2	8.14160391358572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGGCTTGGCTTATT	4187	False	NA	-4	True	AATAAA	-13	NA	34846152	34835639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778
Isoform_6763_39	chr10	+	2258	6	FSM	ENSMUSG00000001436.16	ENSMUST00000144234.8	2309	6	45	6	45	-5	multi-exon	FALSE	canonical	0	0	junction_2	43.968170305347	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76868562	76886260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_76868615_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_67630_3	chr17	-	1735	9	FSM	ENSMUSG00000015474.17	ENSMUST00000064953.15	1729	9	-6	0	-6	0	multi-exon	TRUE	canonical	2	11	junction_8	20.0249843945008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	3982	False	NA	-1	True	AATAAA	-16	NA	34846357	34835636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846220
Isoform_67631_37	chr17	-	1694	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	12	4	3	-2	multi-exon	FALSE	canonical	3	52	junction_2	7.8700381193486	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGGCTTGGCTTATT	3942	False	NA	-4	True	AATAAA	-13	NA	34846397	34835639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
Isoform_67632_12	chr17	-	1827	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	-118	1	-28	0	multi-exon	FALSE	canonical	3	52	junction_2	7.8700381193486	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	3812	False	NA	-1	True	AATAAA	-16	NA	34846527	34835636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
Isoform_67634_15	chr17	-	1682	9	FSM	ENSMUSG00000015474.17	ENSMUST00000166040.9	1139	9	23	-566	23	0	multi-exon	FALSE	canonical	3	10	junction_8	20.3312413541328	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	3349	False	NA	-1	True	AATAAA	-16	NA	34846990	34835636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846906
Isoform_67635_12	chr17	-	1707	9	NIC	ENSMUSG00000015474.17	novel	1729	9	NA	NA	-187	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_8	19.4148783153539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	9886	False	NA	-1	True	AATAAA	-16	NA	34847200	34835636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34847091
Isoform_67636_4	chr17	-	1147	5	NNC	ENSMUSG00000015474.17	novel	772	7	NA	NA	3589	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	26.7254560297855	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGGCTTGGCTTATT	8026	False	NA	-4	True	AATAAA	-13	NA	34842313	34835639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34842212
Isoform_67637_132	chr17	-	1084	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	36	0	18	0	multi-exon	FALSE	canonical	3	81	junction_1	4.59770474137791	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5609	False	NA	-4	True	AATAAA	-16	NA	35055885	35042968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
Isoform_67638_59	chr17	-	1111	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	9	0	9	0	multi-exon	FALSE	canonical	3	81	junction_1	4.59770474137791	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5582	False	NA	-4	True	AATAAA	-16	NA	35055912	35042968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
Isoform_6764_341	chr10	+	2305	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	38	4	-18	-4	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCTTTTCTGTTGTGAG	NA	False	NA	12	True	ATTAAA	-14	NA	76869083	76886261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_67640_14	chr17	-	1300	6	NIC	ENSMUSG00000061207.12	novel	1120	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	82	junction_5	4.14728827066554	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5582	False	NA	-4	True	AATAAA	-16	NA	35055912	35042968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
Isoform_67641_11	chr17	-	1140	4	FSM	ENSMUSG00000061207.12	ENSMUST00000160993.2	768	4	20	-392	20	392	multi-exon	FALSE	canonical	3	82	junction_3	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAGGAAAAAAAA	5611	False	NA	NA	False	NA	NA	NA	35055883	35050352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35051129_35051421_35051518_35055405_35055543_35055752
Isoform_67646_264	chr17	-	3932	28	FSM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	12	7	0	-2	multi-exon	FALSE	canonical	3	88	junction_20	16.8071446039882	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAGTGCTTGGAGTAT	5317	False	NA	-30	True	AATAAA	-6	NA	35069174	35058226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
Isoform_67647_7	chr17	-	4063	28	FSM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	-114	2	-114	-2	multi-exon	FALSE	canonical	3	88	junction_20	16.8071446039882	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	5191	False	NA	-25	True	AATAAA	-11	NA	35069300	35058221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
Isoform_67648_14	chr17	-	4087	27	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	90	junction_19	16.3224262177268	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	5314	False	NA	-25	True	AATAAA	-11	NA	35069177	35058221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
Isoform_6765_71	chr10	+	2341	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	2	4	2	-4	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCTTTTCTGTTGTGAG	NA	False	NA	12	True	ATTAAA	-14	NA	76869047	76886261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_67652_30	chr17	-	2589	18	FSM	ENSMUSG00000024371.15	ENSMUST00000025230.15	2641	18	50	2	-24	-1	multi-exon	TRUE	canonical	1	4	junction_13	3.65842630716852	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCTGTCTTATGTC	NA	False	NA	-2	True	AATAAA	-16	NA	35101026	35081582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35082008_35082154_35082205_35082320_35082451_35082599_35082692_35082838_35082916_35083020_35083187_35083283_35083402_35083487_35083583_35083704_35083846_35085493_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309_35095487_35098857_35099044_35100547_35100773_35100925
Isoform_67653_3	chr17	-	2007	2	FSM	ENSMUSG00000092687.3_ENSMUSG00000092203.8	ENSMUST00000174464.2	785	2	-1224	2	0	1	multi-exon	FALSE	canonical	3	190	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAGACTTTTTCTGTG	6010	False	NA	NA	False	AATAAA	-17	NA	35171444	35169215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35169452_35169673
Isoform_67655_3	chr17	-	548	2	FSM	ENSMUSG00000092203.8	ENSMUST00000174464.2	785	2	228	9	228	-4	multi-exon	FALSE	canonical	3	190	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTTAAATAGACTTT	7462	False	NA	NA	False	AATAAA	-10	NA	35169992	35169222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35169452_35169673
Isoform_67656_5	chr17	-	970	3	FSM	ENSMUSG00000092203.8	ENSMUST00000174039.8	934	3	-34	-2	0	1	multi-exon	FALSE	canonical	3	110	junction_2	40	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAGACTTTTTCTGTG	6010	False	NA	NA	False	AATAAA	-17	NA	35171444	35169215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35169452_35169673_35169824_35170860
Isoform_67657_85	chr17	-	575	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	0	4	0	-4	multi-exon	FALSE	canonical	3	94	junction_4	37.0497975702972	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTTAAATAGACTTT	6010	False	NA	NA	False	AATAAA	-10	NA	35171444	35169222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
Isoform_67658_3	chr17	-	785	4	NIC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	-4	intron_retention	FALSE	canonical	3	94	junction_3	41.9947086613963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTTAAATAGACTTT	6010	False	NA	NA	False	AATAAA	-10	NA	35171444	35169222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35169452_35169673_35169824_35170860_35171150_35171327
Isoform_67659_6	chr17	-	534	4	FSM	ENSMUSG00000092203.8	ENSMUST00000174714.8	520	4	-20	6	0	-4	multi-exon	FALSE	canonical	3	5	junction_2	75.5439533575579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTTAAATAGACTTT	6010	False	NA	NA	False	AATAAA	-10	NA	35171444	35169222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35169452_35169673_35169824_35171111_35171150_35171327
Isoform_6766_7	chr10	+	3393	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	35	-1081	-21	1080	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTGTTTTATCCACTT	NA	False	NA	NA	False	AGTAAA	-20	NA	76869080	76887346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_67660_12	chr17	-	432	4	FSM	ENSMUSG00000092203.8	ENSMUST00000173070.8	434	4	3	-1	0	1	multi-exon	FALSE	canonical	3	38	junction_1	32.4995726467629	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAGACTTTTTCTGTG	6010	False	NA	NA	False	AATAAA	-17	NA	35171444	35169215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35169452_35170860_35170902_35171111_35171150_35171327
Isoform_67662_4	chr17	-	585	4	FSM	ENSMUSG00000036185.10	ENSMUST00000173211.8	618	4	16	17	16	1	multi-exon	FALSE	canonical	3	47	junction_3	4.54606056566195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	35246619	35244951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419
Isoform_67663_5	chr17	-	661	5	NIC	ENSMUSG00000036185.10	novel	665	5	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	14.8218588577816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	35246909	35244953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419_35246561_35246772
Isoform_67664_6	chr17	-	612	5	FSM	ENSMUSG00000036185.10	ENSMUST00000174037.8	665	5	36	17	36	1	multi-exon	FALSE	canonical	3	19	junction_4	14.8218588577816	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	35246854	35244951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419_35246565_35246772
Isoform_67665_8	chr17	-	2703	25	FSM	ENSMUSG00000007035.16	ENSMUST00000097338.11	2678	25	-26	1	-7	-1	multi-exon	FALSE	canonical	1	1	junction_5	4.38728434101198	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTTCCTTAGGTCACC	1763	False	NA	NA	False	AATAAA	-16	NA	35265728	35247581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35247829_35248171_35248246_35248628_35248767_35248853_35248998_35249176_35249252_35249584_35249735_35250123_35250251_35250329_35250520_35250654_35250743_35251316_35251398_35251735_35251846_35252198_35252272_35252565_35252695_35257381_35257445_35258176_35258316_35260445_35260492_35261073_35261157_35262704_35262741_35263000_35263111_35263292_35263415_35264089_35264153_35264269_35264351_35264905_35265030_35265206_35265364_35265675
Isoform_67666_4	chr17	-	632	3	FSM	ENSMUSG00000073413.10	ENSMUST00000007259.4	546	3	7	-93	7	93	multi-exon	FALSE	canonical	2	3	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGAAATGTTCGTTTGGG	NA	False	NA	NA	False	NA	NA	NA	35293469	35290325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35290736_35293150_35293289_35293385
Isoform_67667_4	chr17	-	811	3	FSM	ENSMUSG00000073413.10	ENSMUST00000172639.8	690	3	5	-126	-4	92	multi-exon	FALSE	canonical	2	8	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCGAAATGTTCGTTTGG	NA	False	NA	NA	False	NA	NA	NA	35297036	35290326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35290736_35293150_35293289_35296772
Isoform_67670_663	chr17	-	944	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	17	0	17	0	multi-exon	TRUE	canonical	3	826	junction_1	47.9780042195264	663	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35340245	35335173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
Isoform_67676_8	chr17	-	764	6	FSM	ENSMUSG00000024391.8	ENSMUST00000025249.7	1013	6	249	0	249	0	multi-exon	FALSE	canonical	3	28	junction_5	5.65685424949238	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGGTTTTGTCTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	35350777	35347972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35348112_35349055_35349155_35349383_35349483_35349814_35349895_35350170_35350326_35350585
Isoform_67677_7	chr17	-	899	6	FSM	ENSMUSG00000024391.8	ENSMUST00000025249.7	1013	6	113	1	113	-1	multi-exon	FALSE	canonical	3	28	junction_5	5.65685424949238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCTGGGTTTTGTCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	35350913	35347973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35348112_35349055_35349155_35349383_35349483_35349814_35349895_35350170_35350326_35350585
Isoform_67678_4	chr17	-	985	6	FSM	ENSMUSG00000024391.8	ENSMUST00000025249.7	1013	6	25	3	25	-3	multi-exon	FALSE	canonical	3	28	junction_5	5.65685424949238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTCCTGGGTTTTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	35351001	35347975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35348112_35349055_35349155_35349383_35349483_35349814_35349895_35350170_35350326_35350585
Isoform_67683_11	chr17	-	2852	16	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-2620	-2	combination_of_known_junctions	FALSE	canonical	3	143	junction_7	94.6922500642065	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAAGGGGGG	5411	False	NA	-15	True	AATAAA	-7	NA	35374855	35368065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
Isoform_67684_7	chr17	-	3556	16	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-3310	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_7	94.6922500642065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	4721	False	NA	-1	True	AATAAA	-21	NA	35375545	35368051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
Isoform_6769_16	chr10	+	2519	5	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-21	-5	intron_retention	FALSE	canonical	0	0	junction_2	44.4606567652796	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869080	76886260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_76869182_76874183_76874414_76877649_76878809_76880594_76880737_76885373
Isoform_6770_21	chr10	+	2404	6	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-20	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46.9535941116332	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869081	76886260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_76869280_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_6771_32	chr10	+	2409	6	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-20	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	44.1832547465666	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869081	76886260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_76869285_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_67735_105	chr17	-	6849	31	FSM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	28	11	28	1	multi-exon	FALSE	canonical	3	176	junction_20	122.598119434553	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGGGGGAAA	NA	False	NA	-12	True	AATAAA	-10	NA	35383845	35368062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
Isoform_67736_35	chr17	-	6885	31	FSM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	-8	11	-8	1	multi-exon	FALSE	canonical	3	176	junction_20	122.598119434553	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGGGGGAAA	NA	False	NA	-12	True	AATAAA	-10	NA	35383881	35368062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
Isoform_67739_5	chr17	-	407	4	FSM	ENSMUSG00000073412.7	ENSMUST00000097336.5	415	4	0	8	0	-8	multi-exon	FALSE	canonical	2	6	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATCAGGCTTCTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	35407415	35404078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35404287_35405560_35405581_35405921_35406018_35407332
Isoform_67741_99	chr17	-	1440	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	7	0	7	0	multi-exon	FALSE	canonical	3	75	junction_2	9.89949493661167	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	-1	True	NA	NA	NA	35454761	35439150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
Isoform_67742_32	chr17	-	1481	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	-34	0	-34	0	multi-exon	FALSE	canonical	3	75	junction_2	9.89949493661167	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	-1	True	NA	NA	NA	35454802	35439150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
Isoform_67744_21	chr17	-	1463	4	NNC	ENSMUSG00000042419.9	novel	1447	4	NA	NA	-726	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	32.4995726467629	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	-1	True	NA	NA	NA	35455494	35439150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_35439953_35440112_35440335_35453927_35454208_35455335
Isoform_67745_4	chr17	-	2844	2	ISM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	-43	1	-43	-1	intron_retention	FALSE	canonical	3	75	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCGTTGAATCTAAGTC	9290	False	NA	-6	True	AATAAA	-19	NA	35827764	35823631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_35824082_35825370
Isoform_67747_9	chr17	-	1966	3	ISM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	-23	2	-23	1	intron_retention	FALSE	canonical	3	75	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCGTTGAATCTAAGT	9310	False	NA	-7	True	AATAAA	-18	NA	35827744	35823632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_35824082_35825370_35825918_35826774
Isoform_67748_34	chr17	-	1630	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	35	0	-4	0	multi-exon	FALSE	canonical	3	29	junction_3	21.6846079563875	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9368	False	NA	-5	True	AATAAA	-20	NA	35827686	35823630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
Isoform_67749_5	chr17	-	1719	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	-54	0	-54	0	multi-exon	FALSE	canonical	3	29	junction_3	21.6846079563875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9279	False	NA	-5	True	AATAAA	-20	NA	35827775	35823630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
Isoform_6775_464	chr10	+	2204	9	FSM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	84	2	-16	-2	multi-exon	FALSE	canonical	3	83	junction_5	28.5938695352693	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGCAGTCCTAGAAATG	NA	False	NA	14	True	AATAAA	-15	NA	77095135	77105407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
Isoform_67750_60	chr17	-	1584	4	NIC	ENSMUSG00000050410.16	novel	1665	4	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	19.7989898732233	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCGTTGAATCTAAGT	9364	False	NA	-7	True	AATAAA	-18	NA	35827690	35823632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35824082_35825370_35825918_35826774_35827328_35827655
Isoform_67751_30	chr17	-	1635	4	NIC	ENSMUSG00000050410.16	novel	1665	4	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	19.7989898732233	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9315	False	NA	-5	True	AATAAA	-20	NA	35827739	35823630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35824082_35825370_35825918_35826774_35827328_35827655
Isoform_67752_3	chr17	-	1753	4	FSM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	-17	-4	-17	1	multi-exon	FALSE	canonical	2	5	junction_3	32.9983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTTGAATCTAAGTCTG	9355	False	NA	-4	True	AATAAA	-21	NA	35827699	35823629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35824082_35825370_35825918_35826774_35827437_35827607
Isoform_67762_489	chr17	-	3670	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	0	755	0	1	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGCAAGTGTGAGCCTT	1761	False	NA	-7	True	GATAAA	-14	NA	35978484	35967280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
Isoform_67763_83	chr17	-	4383	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	36	6	-7	-6	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACATGGGGTCTCGTG	1797	False	NA	NA	False	AATAAA	-31	NA	35978448	35966531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
Isoform_67764_9	chr17	-	3799	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	0	626	0	130	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAAAGGAGTTTAGCCT	1761	False	NA	NA	False	NA	NA	NA	35978484	35967151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
Isoform_67768_6	chr17	-	1687	14	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	51.1109710428861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCTACGCGGCTTCA	NA	False	NA	-9	True	AATAAA	-9	NA	35984606	35978629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984406
Isoform_67769_5	chr17	-	1674	14	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	9	junction_13	48.8663192778351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAATCTACGCGGCTT	NA	False	NA	-11	True	AATAAA	-7	NA	35984606	35978631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984417
Isoform_6777_8	chr10	+	2269	9	NIC	ENSMUSG00000020260.10	novel	2290	9	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	45.99184710359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGCAGTCCTAGAAATG	NA	False	NA	14	True	AATAAA	-15	NA	77095141	77105407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101867_77102746_77102928_77103017_77103142_77104360
Isoform_67771_250	chr17	-	1646	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	25	8	-11	0	multi-exon	FALSE	canonical	3	142	junction_8	17.8418429806661	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCTACGCGGCTTCA	NA	False	NA	-9	True	AATAAA	-9	NA	35984606	35978629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
Isoform_67773_4	chr17	-	1640	14	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	50.5576008718487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAATCTACGCGGCT	NA	False	NA	-12	True	AATAAA	-6	NA	35984607	35978632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982121_35982250_35982884_35982990_35983577_35983721_35984447
Isoform_67774_6	chr17	-	2742	11	ISM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	10642	2	8003	1	3prime_fragment	FALSE	canonical	3	13	junction_10	9.58331884056875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGGGTGTATTTCCT	5779	False	NA	-1	True	AATAAA	-33	NA	36000860	35992460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558
Isoform_67775_10	chr17	-	3098	12	ISM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	10206	2	7567	1	3prime_fragment	FALSE	canonical	3	13	junction_10	9.54502163520486	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGGGTGTATTTCCT	5343	False	NA	-1	True	AATAAA	-33	NA	36001296	35992460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885
Isoform_67776_6	chr17	-	3726	18	NIC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	160	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	11.600620434428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6891	False	NA	1	True	AATAAA	-35	NA	36008703	35992458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36008566
Isoform_67777_15	chr17	-	3794	18	FSM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	-38	13	-38	-10	multi-exon	FALSE	canonical	3	11	junction_16	10.4162502800285	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTCCACAGCTGTGG	9009	False	NA	-12	True	AATAAA	-22	NA	36011540	35992471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
Isoform_67778_6	chr17	-	3616	18	FSM	ENSMUSG00000003534.18	ENSMUST00000166980.9	3627	18	14	-3	14	0	multi-exon	TRUE	canonical	0	0	junction_17	11.600620434428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	7627	False	NA	1	True	AATAAA	-35	NA	36012922	35992458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36012895
Isoform_67779_44	chr17	-	2498	11	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8954	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	9.22821759604746	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6730	False	NA	1	True	AATAAA	-35	NA	35999909	35992458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_35999853
Isoform_67780_17	chr17	-	2490	11	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8954	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	10.9949988631195	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6730	False	NA	1	True	AATAAA	-35	NA	35999909	35992458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_35999861
Isoform_67781_3	chr17	-	2573	10	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8955	-16	intron_retention	FALSE	canonical	3	15	junction_9	9.7271416125508	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGTTTTTCCACAG	6731	False	NA	-18	True	AATAAA	-16	NA	35999908	35992477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999762_35999853
Isoform_67782_7	chr17	-	2984	11	ISM	ENSMUSG00000003534.18	ENSMUST00000155957.8	2633	16	10153	-864	7572	0	3prime_fragment	FALSE	canonical	3	12	junction_6	10.7893465974544	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	5348	False	NA	1	True	AATAAA	-35	NA	36001291	35992458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885
Isoform_67783_10	chr17	-	3666	17	NIC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	11.1186779789685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	9039	False	NA	1	True	AATAAA	-35	NA	36011510	35992458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
Isoform_67784_3	chr17	-	3512	17	NIC	ENSMUSG00000003534.18	novel	3627	18	NA	NA	-11	-17	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	12.2805740908151	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTGTTTTTCCACA	7600	False	NA	-19	True	AATAAA	-15	NA	36012949	35992478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36012895
Isoform_67785_23	chr17	-	2387	10	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8954	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	10.60863845536	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6730	False	NA	1	True	AATAAA	-35	NA	35999909	35992458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_35999853
Isoform_67786_7	chr17	-	2376	10	NNC	ENSMUSG00000003534.18	novel	3593	17	NA	NA	8954	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	12.3418389089439	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGGTGTATTTCC	6730	False	NA	-2	True	AATAAA	-32	NA	35999909	35992461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_35999861
Isoform_67787_3	chr17	-	2448	9	NNC	ENSMUSG00000003534.18	novel	2633	16	NA	NA	8975	-10	intron_retention	FALSE	canonical	3	12	junction_6	11.2520831404678	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTCCACAGCTGTGG	6751	False	NA	-12	True	AATAAA	-22	NA	35999888	35992471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999762_35999853
Isoform_67798_5183	chr17	-	2571	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	74	4	-15	-4	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	5183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTGTGAGGCTGTGT	NA	False	NA	-11	True	AATAAA	-12	NA	36149124	36144816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
Isoform_67799_444	chr17	-	2619	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	26	4	26	-4	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTGTGAGGCTGTGT	NA	False	NA	-11	True	AATAAA	-12	NA	36149172	36144816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
Isoform_6780_927	chr10	+	2261	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	33	0	-3	0	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTTTGTTTTGT	1324	False	NA	32	True	AATAAA	-15	NA	77417586	77434566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
Isoform_67800_13831	chr17	-	1690	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	74	885	-15	799	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	13831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCTTTCTCTTTCCA	NA	False	NA	-33	True	NA	NA	NA	36149124	36145697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
Isoform_67801_1087	chr17	-	1738	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	26	885	26	799	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCTTTCTCTTTCCA	NA	False	NA	-33	True	NA	NA	NA	36149172	36145697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
Isoform_67818_33	chr17	-	2080	5	FSM	ENSMUSG00000050705.16	ENSMUST00000146451.8	2081	5	10	-9	2	-1	multi-exon	FALSE	canonical	3	307	junction_3	46.1756158594555	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGGTTTTCACGTCACT	NA	False	NA	-4	True	AATAAA	-18	NA	36207993	36203569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562
Isoform_6782_93	chr10	+	2294	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTTTGTTTTGT	1291	False	NA	32	True	AATAAA	-15	NA	77417553	77434566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
Isoform_67820_56	chr17	-	1171	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148482.8	1193	6	19	3	2	-3	multi-exon	FALSE	canonical	3	95	junction_5	123.227269709265	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAGGTTTTCACGTCA	NA	False	NA	-6	True	AATAAA	-16	NA	36207993	36203571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
Isoform_67822_28	chr17	-	1120	6	NIC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	147.212227752996	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	-5	True	AATAAA	-17	NA	36208006	36203570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207936
Isoform_67823_130	chr17	-	1209	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	81	3	-38	-3	multi-exon	FALSE	canonical	3	184	junction_5	90.4765162901402	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAGGTTTTCACGTCA	NA	False	NA	-6	True	AATAAA	-16	NA	36208242	36203571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
Isoform_67824_69	chr17	-	1296	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	-6	3	-6	-3	multi-exon	FALSE	canonical	3	184	junction_5	90.4765162901402	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAGGTTTTCACGTCA	NA	False	NA	-6	True	AATAAA	-16	NA	36208329	36203571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
Isoform_67825_5	chr17	-	2189	4	NIC	ENSMUSG00000050705.16	novel	2081	5	NA	NA	-15	1	intron_retention	FALSE	canonical	3	307	junction_2	50.4799189997589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTTTTCACGTCACTTT	NA	False	NA	-2	True	AATAAA	-20	NA	36208027	36203567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36204002_36205810_36206012_36206175_36206265_36206562
Isoform_67826_57	chr17	-	1418	13	FSM	ENSMUSG00000024426.18	ENSMUST00000061052.12	1452	13	30	4	0	-4	multi-exon	FALSE	canonical	3	70	junction_5	27.2308801424657	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGACTTGTCATTATT	NA	False	NA	-2	True	AATAAA	-34	NA	36220937	36208490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67827_40	chr17	-	1363	12	FSM	ENSMUSG00000024426.18	ENSMUST00000077494.13	1340	12	-13	-10	-2	-4	multi-exon	TRUE	canonical	3	28	junction_5	34.4359508470988	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGACTTGTCATTATT	NA	False	NA	-2	True	AATAAA	-34	NA	36220951	36208490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67828_27	chr17	-	1379	12	FSM	ENSMUSG00000024426.18	ENSMUST00000149277.8	1388	12	12	-3	0	0	multi-exon	FALSE	canonical	3	11	junction_2	38.3140567174602	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACCGACAAAAAGTGACT	NA	False	NA	-12	True	AATAAA	-24	NA	36220937	36208500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67829_10	chr17	-	1343	11	NIC	ENSMUSG00000024426.18	novel	1388	12	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	44.8905335232274	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGACTTGTCATTATT	NA	False	NA	-2	True	AATAAA	-34	NA	36220960	36208490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67830_11	chr17	-	1364	12	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	38.0604130471848	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTACCGACAAAAAGTGAC	NA	False	NA	-13	True	AATAAA	-23	NA	36220937	36208501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36208808_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67831_5	chr17	-	1763	12	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	70	junction_4	27.717584000232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACCGACAAAAAGTGACT	NA	False	NA	-12	True	AATAAA	-24	NA	36220951	36208500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67832_3	chr17	-	1842	11	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	0	4	intron_retention	FALSE	canonical	3	70	junction_3	26.6390690528029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACAAAAAGTGACTTGTC	NA	False	NA	-8	True	AATAAA	-28	NA	36220938	36208496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67833_3	chr17	-	1779	10	NIC	ENSMUSG00000024426.18	novel	1340	12	NA	NA	-1	1	intron_retention	FALSE	canonical	3	28	junction_3	35.5965041979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCTACCGACAAAAAGTGA	NA	False	NA	-14	True	AATAAA	-22	NA	36220950	36208502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67834_9	chr17	-	2044	11	FSM	ENSMUSG00000024426.18	ENSMUST00000141662.8	2034	11	-30	20	0	15	multi-exon	FALSE	canonical	3	5	junction_1	41.2200194080498	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGAAAAACATCTTAAGGTT	NA	False	NA	NA	False	AATAAA	-39	NA	36220967	36210728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36211765_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67836_3	chr17	-	1027	9	ISM	ENSMUSG00000024426.18	ENSMUST00000056034.13	1930	10	-14	1412	-2	720	5prime_fragment	FALSE	canonical	3	28	junction_2	36.2299513524377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATTTCTGCAGCACT	NA	False	NA	NA	False	AATGAA	-11	NA	36220951	36212155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_67839_23	chr17	-	2567	6	ISM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	-2	1	-2	-1	intron_retention	FALSE	canonical	3	1264	junction_4	57.164324538999	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4294	False	NA	-7	True	AATAAA	-20	NA	36227283	36221271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587
Isoform_67842_76	chr17	-	1093	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	-15	1	-15	-1	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4281	False	NA	-7	True	AATAAA	-20	NA	36227296	36221271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
Isoform_67843_1490	chr17	-	1064	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	14	1	2	-1	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4310	False	NA	-7	True	AATAAA	-20	NA	36227267	36221271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
Isoform_67850_18	chr17	-	1023	6	FSM	ENSMUSG00000024436.17	ENSMUST00000174349.8	488	6	-63	-472	-11	0	multi-exon	FALSE	canonical	3	24	junction_2	528.957313967772	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4285	False	NA	-6	True	AATAAA	-21	NA	36227292	36221270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36221849_36222310_36222371_36225225_36225295_36225383_36225482_36225587_36225697_36227183
Isoform_67879_1199	chr17	-	3154	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	10	-3	10	3	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTGTGGGGTGCTTCC	NA	False	NA	-9	True	AATAAA	-21	NA	36280643	36267707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
Isoform_67883_129	chr17	-	3235	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10	0	intron_retention	FALSE	canonical	3	801	junction_12	69.407338839688	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280643	36267710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
Isoform_67893_82	chr17	-	1918	4	FSM	ENSMUSG00000038500.16	ENSMUST00000172429.8	1878	4	-40	0	-40	0	multi-exon	FALSE	canonical	3	103	junction_2	20.5101600838869	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36289903	36283432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602
Isoform_67895_19	chr17	-	2082	5	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	8	2	intron_retention	FALSE	canonical	3	88	junction_4	22.0056810846654	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTCATTTCTCTGTT	NA	False	NA	1	True	AATAAA	-18	NA	36290410	36283430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018
Isoform_67896_65	chr17	-	1815	5	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	22.0056810846654	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36290145	36283432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018
Isoform_67900_46	chr17	-	2132	6	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	213	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	36.7205664444327	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTCTCTCATTTCTCT	NA	False	NA	-2	True	AATAAA	-15	NA	36290915	36283433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018_36290148_36290599
Isoform_67901_36	chr17	-	2355	6	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	36.7205664444327	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTCATTTCTCTGTT	NA	False	NA	1	True	AATAAA	-18	NA	36291135	36283430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018_36290148_36290599
Isoform_67903_6	chr17	-	2023	4	FSM	ENSMUSG00000038500.16	ENSMUST00000055454.14	2727	4	703	1	-7	-1	multi-exon	FALSE	canonical	3	22	junction_3	38.4216374224502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTCTCTCATTTCTCT	NA	False	NA	-2	True	AATAAA	-15	NA	36290425	36283433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36290018
Isoform_67906_17	chr17	-	3333	3	FSM	ENSMUSG00000073406.11	ENSMUST00000184850.8	1072	3	-2260	-1	-24	1	multi-exon	FALSE	canonical	3	395	junction_2	90.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTATGTTTCCTGCATT	NA	False	NA	-4	True	AATAAA	-23	NA	36395139	36391005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36391216_36391890_36392008_36392133
Isoform_67910_55	chr17	-	1206	6	FSM	ENSMUSG00000073406.11	ENSMUST00000195838.6	1105	6	-24	-77	-24	3	multi-exon	FALSE	canonical	3	113	junction_5	180.752427369593	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTTTCCTGCATTGA	NA	False	NA	-2	True	AATAAA	-25	NA	36395139	36391003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394825_36395051
Isoform_67912_219	chr17	-	1239	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	-24	-77	-24	3	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTTTCCTGCATTGA	NA	False	NA	-2	True	AATAAA	-25	NA	36395139	36391003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
Isoform_67913_24	chr17	-	1285	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	-70	-77	-70	3	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTTTCCTGCATTGA	NA	False	NA	-2	True	AATAAA	-25	NA	36395185	36391003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
Isoform_67915_77	chr17	-	930	5	FSM	ENSMUSG00000073406.11	ENSMUST00000195833.6	829	5	-24	-77	-24	3	multi-exon	FALSE	canonical	3	113	junction_4	176.893329438959	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTTTCCTGCATTGA	NA	False	NA	-2	True	AATAAA	-25	NA	36395139	36391003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394825_36395051
Isoform_67917_289	chr17	-	961	5	FSM	ENSMUSG00000073406.11	ENSMUST00000194244.6	862	5	-24	-75	-24	1	multi-exon	FALSE	canonical	3	214	junction_3	129.95191418367	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTATGTTTCCTGCATT	NA	False	NA	-4	True	AATAAA	-23	NA	36395139	36391005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394858_36395051
Isoform_6792_52	chr10	+	1694	5	FSM	ENSMUSG00000020265.17	ENSMUST00000137841.9	1005	5	26	-715	10	3	multi-exon	FALSE	canonical	3	61	junction_3	668.550858200033	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCCTATGTTAAACACT	NA	False	NA	28	True	AGTAAA	-21	NA	77442068	77453259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451760_77451869_77451981
Isoform_67923_32	chr17	-	3139	4	NIC	ENSMUSG00000073406.11	novel	1064	6	NA	NA	-24	1	intron_retention	FALSE	canonical	3	343	junction_3	99.8632398165945	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTATGTTTCCTGCATT	NA	False	NA	-4	True	AATAAA	-23	NA	36395139	36391005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36391216_36391890_36392008_36392133_36394858_36395051
Isoform_67925_11	chr17	-	655	3	ISM	ENSMUSG00000024446.14	ENSMUST00000173486.8	579	4	0	5	0	1	intron_retention	FALSE	canonical	3	770	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTTCTGTGGTATCT	NA	False	NA	-21	True	AATAAA	-15	NA	36568735	36566563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_36566691_36566835_36566962_36568333
Isoform_67926_20	chr17	-	601	4	FSM	ENSMUSG00000024446.14	ENSMUST00000173486.8	579	4	-22	0	-9	0	multi-exon	FALSE	canonical	3	621	junction_3	70.7153920067383	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568757	36566558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497
Isoform_67927_277	chr17	-	498	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	226	5	0	1	multi-exon	FALSE	canonical	3	621	junction_3	61.4262769505038	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTTCTGTGGTATCT	NA	False	NA	-21	True	AATAAA	-15	NA	36568735	36566563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
Isoform_67928_170	chr17	-	525	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	204	0	-9	0	multi-exon	FALSE	canonical	3	621	junction_3	61.4262769505038	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568757	36566558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
Isoform_6793_1269	chr10	+	1586	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	137	907	9	2	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCCTATGTTAAACAC	NA	False	NA	27	True	AGTAAA	-20	NA	77442067	77453258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
Isoform_67930_18	chr17	-	584	4	NIC	ENSMUSG00000024446.14	novel	729	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	710	junction_3	28.7672653471886	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568735	36566558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_36566691_36566835_36566962_36568333_36568599_36568674
Isoform_67934_99	chr17	-	3048	7	FSM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	157	-1	-27	1	multi-exon	FALSE	canonical	3	42	junction_1	8.81286937760152	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGAGTTGCGTGGTAA	NA	False	NA	-7	True	NA	NA	NA	36582302	36569763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
Isoform_67939_18	chr17	-	1492	5	FSM	ENSMUSG00000045409.17	ENSMUST00000113704.10	1465	5	-26	-1	-26	1	multi-exon	FALSE	canonical	3	20	junction_1	19.421315609402	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATTGTGTTTGTCATC	NA	False	NA	1	True	ATTAAA	-21	NA	36582301	36573495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_36574130_36574620_36574852_36578016_36578113_36579500_36579959_36582228
Isoform_67940_4	chr17	-	1976	4	ISM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	159	3737	-25	-3	5prime_fragment	FALSE	canonical	3	58	junction_1	6.37704215656966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGAGATTCATTGTGTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	36582300	36573501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_36574852_36578016_36578113_36579500_36579959_36582228
Isoform_67941_42	chr17	-	1572	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	30	-3	30	3	multi-exon	FALSE	canonical	3	708	junction_2	5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTTAAATACAGGCCCA	NA	False	NA	NA	False	AATAAA	-18	NA	37262575	37259244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_37260447_37260768_37260878_37262314
Isoform_67942_221	chr17	-	608	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	57	934	57	0	multi-exon	FALSE	canonical	3	708	junction_2	5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGCCTCCGTTCTCCT	NA	False	NA	-15	True	AATATA	-23	NA	37262548	37260181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_37260447_37260768_37260878_37262314
Isoform_67944_5	chr17	-	745	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	-80	934	-52	0	multi-exon	FALSE	canonical	3	708	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGCCTCCGTTCTCCT	NA	False	NA	-15	True	AATATA	-23	NA	37262685	37260181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_37260447_37260768_37260878_37262314
Isoform_67945_48	chr17	-	724	4	FSM	ENSMUSG00000036315.14	ENSMUST00000113669.9	742	4	17	1	17	1	multi-exon	FALSE	canonical	3	586	junction_1	61.9157133170212	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGATGTTATGTGTGT	NA	False	NA	-12	True	ACTAAA	-16	NA	37269357	37265248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040
Isoform_67949_786	chr17	-	643	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	68	-1	17	1	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGATGTTATGTGTGT	NA	False	NA	-12	True	ACTAAA	-16	NA	37269357	37265248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
Isoform_67950_79	chr17	-	724	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	-13	-1	-13	1	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGATGTTATGTGTGT	NA	False	NA	-12	True	ACTAAA	-16	NA	37269438	37265248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
Isoform_67951_6	chr17	-	2570	3	ISM	ENSMUSG00000083534.2	ENSMUST00000119193.2	1034	5	755	-1844	755	1844	3prime_fragment	FALSE	canonical	3	153	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37281533	37278242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_37280210_37280331_37280614_37281212
Isoform_67952_8	chr17	-	857	4	FSM	ENSMUSG00000064308.11	ENSMUST00000039846.12	865	4	0	8	0	-8	multi-exon	FALSE	canonical	3	6	junction_1	4.49691252107735	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCCCATATAAAATTTT	NA	False	NA	-28	True	ATTAAA	-21	NA	37292129	37288600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_37288999_37289360_37289439_37289542_37289826_37292031
Isoform_67953_88	chr17	-	1969	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	763	-273	271	273	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTGTTAAGTGAGACT	NA	False	NA	-10	True	NA	NA	NA	37299666	37294679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
Isoform_67962_3	chr17	-	2280	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	460	-281	-32	281	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGTGAGACTGGAAAAAA	NA	False	NA	-2	True	TTTAAA	-7	NA	37299969	37294671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
Isoform_67967_3	chr17	-	2504	5	NIC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	7	276	intron_retention	FALSE	canonical	3	15	junction_4	93.890894127173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTAAGTGAGACTGGA	NA	False	NA	-7	True	TTTAAA	-2	NA	37300422	37294676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396_37300097_37300320
Isoform_67968_119	chr17	-	1462	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	473	7	473	-7	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTTCTGATGTGTGAG	NA	False	NA	-8	True	AATAAA	-20	NA	41245465	41233948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
Isoform_67970_5	chr17	-	3715	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	473	-2246	473	2246	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCATTTCTTTGCATTC	NA	False	NA	NA	False	ATTAAA	-21	NA	41245465	41231695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
Isoform_67977_143	chr17	-	5381	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-259	242	17	-241	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTATTAATATTTTTAG	NA	False	NA	-9	True	AATAAA	-45	NA	43187539	43104083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
Isoform_67978_88	chr17	-	5638	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-274	0	2	0	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	False	NA	-3	True	AATAAA	-17	NA	43187554	43103841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
Isoform_6798_21	chr10	+	1773	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	-43	900	-43	9	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTTAAACACTGTATTT	NA	False	NA	34	True	AGTAAA	-27	NA	77441887	77453265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
Isoform_6799_34	chr10	+	2199	8	NIC	ENSMUSG00000112241.2	novel	512	6	NA	NA	38	4452	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	535.279480691143	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTGTGGTGCTCACT	NA	False	NA	7	True	AATAAA	-20	NA	77442068	77481829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_77442176_77445645_77445775_77449813_77449886_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
Isoform_67992_31	chr17	-	5336	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	25	-242	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	66.4230959957521	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTATTAATATTTTTA	NA	False	NA	-10	True	AATAAA	-44	NA	43187531	43104084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
Isoform_67994_17	chr17	-	5629	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	66.4230959957521	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	False	NA	-3	True	AATAAA	-17	NA	43187581	43103841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
Isoform_68_110	ERCC-00044	+	1148	1	FSM	ERCC-00044A	DQ459424	1149	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-27	NA	1	1149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00044_+_0_1100
Isoform_68000_17	chr17	-	4540	4	FSM	ENSMUSG00000023961.17	ENSMUST00000024757.14	4560	4	19	1	19	-1	multi-exon	FALSE	canonical	3	12	junction_3	10.2740233382816	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCAGCCTTCTTAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	44416681	44407199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416539
Isoform_68005_25	chr17	-	4519	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	-74	0	-29	0	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATATCAGCCTTC	NA	False	NA	NA	False	AATAAA	-9	NA	44416729	44407206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
Isoform_68007_4	chr17	-	4652	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	-207	0	-162	0	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATATCAGCCTTC	NA	False	NA	NA	False	AATAAA	-9	NA	44416862	44407206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
Isoform_68027_176	chr17	-	2987	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	33	7	33	-7	multi-exon	FALSE	canonical	3	561	junction_9	75.0022221893014	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGAGTGTAGCCTTTT	2217	False	NA	-9	True	AATAAA	-13	NA	45744630	45702816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
Isoform_68028_1429	chr17	-	2833	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	187	7	-9	-7	multi-exon	TRUE	canonical	3	561	junction_9	75.0022221893014	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGAGTGTAGCCTTTT	2371	False	NA	-9	True	AATAAA	-13	NA	45744476	45702816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
Isoform_6803_38	chr10	+	1831	4	FSM	ENSMUSG00000020265.17	ENSMUST00000099538.6	1874	4	45	-2	45	2	multi-exon	FALSE	canonical	3	41	junction_1	598.245397437837	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCCTATGTTAAACAC	NA	False	NA	27	True	AGTAAA	-20	NA	77442449	77453258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77442803_77445645_77445775_77449813_77449886_77451981
Isoform_6806_829	chr10	+	1979	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	53	-1	5	1	multi-exon	FALSE	canonical	3	276	junction_5	14.0427917452336	829	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTGTGGTGCTCAC	143	False	NA	6	True	AATAAA	-19	NA	77458161	77481828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
Isoform_68075_40655	chr17	-	2518	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	3	-1	3	1	multi-exon	TRUE	canonical	3	9221	junction_4	988.252604347694	40655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTCTCCTTGTAACA	NA	False	NA	-23	True	AATAAA	-20	NA	45884194	45878699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
Isoform_68076_777	chr17	-	2560	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	-41	1	-41	-1	multi-exon	FALSE	canonical	3	9221	junction_4	988.252604347694	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCTGCTCTCCTTGTAA	NA	False	NA	-25	True	AATAAA	-18	NA	45884238	45878701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
Isoform_68130_2535	chr17	-	2052	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	1063	junction_5	395.007197897117	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906452	45896127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_68131_552	chr17	-	2091	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	1063	junction_5	395.007197897117	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATAGCTCTGTGCATCC	NA	False	NA	-8	True	AATAAA	-11	NA	45906496	45896132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_68140_153	chr17	-	1953	13	FSM	ENSMUSG00000023942.16	ENSMUST00000051574.13	1996	13	46	-3	-11	0	multi-exon	FALSE	canonical	3	154	junction_12	699.864927444337	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45906452	45896125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
Isoform_68148_85	chr17	-	2179	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	1063	junction_5	409.470050458177	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATAGCTCTGTGCATCC	NA	False	NA	-8	True	AATAAA	-11	NA	45906452	45896132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_6815_42	chr10	+	1696	7	FSM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	126	-4	-4	2	multi-exon	FALSE	canonical	3	54	junction_4	1.5723301886761	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCCAGGCCCACTT	NA	False	NA	16	True	AATAAA	-16	NA	77814483	77821272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77814616_77815586_77815606_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
Isoform_68159_3502	chr17	-	2046	14	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	1453	junction_5	311.5369990469	3502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906453	45896128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_6816_5	chr10	+	1057	6	NIC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-22	321	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	21.8595516879921	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGAAGGTCTGGGACAG	NA	False	NA	2	True	AATAAA	-15	NA	77814465	77820634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_77814616_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
Isoform_68169_170	chr17	-	1948	13	FSM	ENSMUSG00000023942.16	ENSMUST00000064889.13	1988	13	41	-1	12	0	multi-exon	FALSE	canonical	3	154	junction_12	659.372555287727	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906455	45896127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
Isoform_68181_85	chr17	-	2177	13	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	11	-4	intron_retention	FALSE	canonical	3	1453	junction_5	323.049746771126	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATAGCTCTGTGCATCC	NA	False	NA	-8	True	AATAAA	-11	NA	45906456	45896132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_6819_9	chr10	+	3508	6	ISM	ENSMUSG00000000732.10	ENSMUST00000105393.3	2814	7	25	0	25	0	intron_retention	FALSE	canonical	3	8	junction_2	4.4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	5	True	AATAAA	-17	NA	77905160	77915359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977
Isoform_68193_110	chr17	-	848	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	51	-283	51	0	multi-exon	FALSE	canonical	3	164	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912841	45911896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45912612_45912708
Isoform_68194_34	chr17	-	902	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	-3	-283	1	0	multi-exon	FALSE	canonical	3	164	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912895	45911896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45912612_45912708
Isoform_68195_60	chr17	-	770	2	FSM	ENSMUSG00000079471.5	ENSMUST00000208801.2	437	2	49	-382	45	0	multi-exon	FALSE	canonical	3	33	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912847	45911896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45912612_45912792
Isoform_68196_3	chr17	-	777	2	NNC	ENSMUSG00000079471.5	novel	804	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45913028	45911896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_45912612_45912966
Isoform_68197_6	chr17	-	2142	18	ISM	ENSMUSG00000058626.17	ENSMUST00000120717.8	2591	22	16317	-26	16289	26	3prime_fragment	FALSE	canonical	0	0	junction_6	2.25072076114223	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGGCTCTGCAAATGT	NA	False	NA	NA	False	AATAAA	-40	NA	45953934	45941103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_45941538_45941651_45941711_45942713_45942828_45942934_45943014_45943306_45943376_45943624_45943690_45943800_45943859_45943965_45944032_45944294_45944335_45944697_45944910_45945193_45945206_45949620_45949797_45949994_45950159_45950335_45950411_45950548_45950635_45950728_45950813_45953393_45953563_45953754
Isoform_68198_3	chr17	-	2364	15	NIC	ENSMUSG00000058626.17	novel	2591	22	NA	NA	16268	-1174	intron_retention	FALSE	canonical	0	0	junction_4	2.06155281280883	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	45953955	45942303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45942828_45942934_45943014_45943306_45943376_45943624_45943690_45943800_45943859_45943965_45944032_45944294_45944335_45944697_45945206_45949620_45949797_45949994_45950159_45950335_45950411_45950548_45950635_45950728_45950813_45953393_45953563_45953754
Isoform_6820_21	chr10	+	2836	7	FSM	ENSMUSG00000000732.10	ENSMUST00000105393.3	2814	7	-22	0	-22	0	multi-exon	FALSE	canonical	3	8	junction_2	4.83045891539648	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	5	True	AATAAA	-17	NA	77905113	77915359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977_77913008_77913726
Isoform_68206_9	chr17	-	3357	24	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_23	42.6672180178617	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997063	45971102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45996841
Isoform_68208_301	chr17	-	3177	24	FSM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	102	5	-20	-5	multi-exon	FALSE	canonical	3	105	junction_20	27.310993375713	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	-11	True	AATAAA	-15	NA	45997083	45971101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
Isoform_68211_10	chr17	-	3316	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	7	junction_22	45.6465037629951	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	-11	True	AATAAA	-15	NA	45997060	45971101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45996841
Isoform_68213_84	chr17	-	3217	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	23	-5	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	30.8694933524137	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	-11	True	AATAAA	-15	NA	45997162	45971101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
Isoform_6822_1229	chr10	+	529	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	74	0	74	0	multi-exon	FALSE	canonical	3	3631	junction_2	117.5	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTCCTTAGTTTT	NA	False	NA	23	True	AATATA	-18	NA	78261576	78263456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_78261692_78262760_78262863_78263144
Isoform_68225_101	chr17	-	3524	8	FSM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	-4	-1547	-4	-3	multi-exon	FALSE	canonical	3	122	junction_2	174.18943476478	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	-4	True	ATTAAA	-19	NA	46343299	46327921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
Isoform_68234_22	chr17	-	5242	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	122	junction_2	146.247981942392	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	-4	True	ATTAAA	-19	NA	46343301	46327921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
Isoform_6824_87	chr10	+	607	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	-4	0	-4	0	multi-exon	TRUE	canonical	3	3631	junction_2	117.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTCCTTAGTTTT	NA	False	NA	23	True	AATATA	-18	NA	78261498	78263456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_78261692_78262760_78262863_78263144
Isoform_68241_296	chr17	-	3452	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	-4	3	-4	-3	multi-exon	FALSE	canonical	3	338	junction_2	72.4463402955748	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	-4	True	ATTAAA	-19	NA	46343299	46327921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
Isoform_6825_46	chr10	+	2287	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	-34	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.9345521815444	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5341	False	NA	27	True	AATAAA	-36	NA	78410275	78420333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_78410403_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_68255_27	chr17	-	4274	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	338	junction_2	76.7984374841051	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAAAGCTCTCCCTGGTC	NA	False	NA	-8	True	ATTAAA	-15	NA	46343299	46327925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46339276_46339326_46342216
Isoform_68261_37	chr17	-	3320	6	FSM	ENSMUSG00000023951.19	ENSMUST00000024747.14	2765	6	-558	3	-4	-3	multi-exon	FALSE	canonical	3	41	junction_1	191.124671353543	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	-4	True	ATTAAA	-19	NA	46343299	46327921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
Isoform_6827_41	chr10	+	2306	16	FSM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	20	3	20	-1	multi-exon	FALSE	canonical	3	14	junction_1	41.9345521815444	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5419	False	NA	27	True	AATAAA	-36	NA	78410353	78420333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_68271_6	chr17	-	948	5	FSM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	18	0	18	0	multi-exon	FALSE	canonical	1	1	junction_4	1.22474487139159	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTGATTGTTGT	NA	False	NA	NA	False	CATAAA	-21	NA	46455124	46440196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46440425_46445898_46446046_46447667_46447798_46452472_46452639_46454847
Isoform_68272_105	chr17	-	1245	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	26	1	26	-1	multi-exon	FALSE	canonical	3	95	junction_1	3.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTTGATTTAGACTTT	NA	False	NA	-3	True	AATAAA	-20	NA	46464453	46458313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46459211_46463704_46463968_46464368
Isoform_68273_109	chr17	-	1225	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	49	-2	49	2	multi-exon	FALSE	canonical	3	95	junction_1	3.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATTTAGACTTTTGG	NA	False	NA	0	True	AATAAA	-23	NA	46464430	46458310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46459211_46463704_46463968_46464368
Isoform_68275_29	chr17	-	3228	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	9	1	9	-1	multi-exon	TRUE	canonical	3	10	junction_7	5.44426303552648	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGGCTTGCATACTTT	7132	False	NA	-13	True	AATAAA	-14	NA	46513562	46482281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
Isoform_68276_7	chr17	-	3041	10	FSM	ENSMUSG00000023953.10	ENSMUST00000233438.2	2130	10	-41	-870	-18	0	multi-exon	FALSE	canonical	2	4	junction_7	6.99382443638054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7105	False	NA	-12	True	AATAAA	-15	NA	46513589	46482280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46509559_46509695_46510317_46510461_46513322
Isoform_6828_8	chr10	+	2393	16	FSM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	-66	2	-42	0	multi-exon	FALSE	canonical	3	14	junction_1	41.9345521815444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTATACTGGTTTA	5333	False	NA	28	True	AATAAA	-37	NA	78410267	78420334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_68284_884	chr17	-	1233	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	74	7	-12	-7	multi-exon	TRUE	canonical	3	702	junction_8	54.719597723302	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTTTTTTTTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	46558906	46554852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
Isoform_68285_41	chr17	-	1284	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	23	7	23	-7	multi-exon	FALSE	canonical	3	702	junction_8	54.719597723302	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTTTTTTTTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	46558957	46554852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
Isoform_68288_12	chr17	-	1350	8	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-26	-7	intron_retention	FALSE	canonical	3	702	junction_7	54.3368180511002	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTTTTTTTTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	46558920	46554852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46555147_46555231_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
Isoform_68291_14	chr17	-	2536	12	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	142.183213199387	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5834	False	NA	-32	True	AATAAA	-16	NA	46593924	46568801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
Isoform_68292_12	chr17	-	2571	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	132.534106011239	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5833	False	NA	-31	True	AATAAA	-17	NA	46593925	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_68293_14	chr17	-	2440	11	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	139.770848176578	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5834	False	NA	-31	True	AATAAA	-17	NA	46593924	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
Isoform_68294_25	chr17	-	2573	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	128.047189132086	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5834	False	NA	-31	True	AATAAA	-17	NA	46593924	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_68295_19	chr17	-	2462	11	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	135.013925207736	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5813	False	NA	-33	True	AATAAA	-15	NA	46593945	46568802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
Isoform_68298_65	chr17	-	2637	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	112.156620125682	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5834	False	NA	-31	True	AATAAA	-17	NA	46593924	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_68301_90	chr17	-	2508	11	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	117.719199793407	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5833	False	NA	-31	True	AATAAA	-17	NA	46593925	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
Isoform_68305_154	chr17	-	2540	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	80	junction_7	97.6076328982524	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5834	False	NA	-31	True	AATAAA	-17	NA	46593924	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_68308_58	chr17	-	2420	10	FSM	ENSMUSG00000012296.17	ENSMUST00000012440.14	2426	10	2	4	2	-1	multi-exon	FALSE	canonical	3	80	junction_7	101.660412679532	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5824	False	NA	-31	True	AATAAA	-17	NA	46593934	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
Isoform_6831_56	chr10	+	2519	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	39.9503024602651	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTATACTGGTTTAT	5377	False	NA	29	True	AATAAA	-38	NA	78410311	78420335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_68310_29	chr17	-	2666	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	119.555098124686	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATCCCCTTTTTGCTTT	5834	False	NA	-5	True	AATAAA	-43	NA	46593924	46568774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_68311_35	chr17	-	2511	11	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	125.623246256415	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5833	False	NA	-31	True	AATAAA	-17	NA	46593925	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46593271_46593366_46593885
Isoform_68315_236	chr17	-	2553	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	5	1	2	-1	multi-exon	FALSE	canonical	3	131	junction_7	88.074059745194	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5824	False	NA	-31	True	AATAAA	-17	NA	46593934	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_68318_195	chr17	-	2414	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	0	-2	0	-1	multi-exon	FALSE	canonical	3	131	junction_7	91.006850915633	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5833	False	NA	-31	True	AATAAA	-17	NA	46593925	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
Isoform_68319_14	chr17	-	2436	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	-22	-2	5	-1	multi-exon	FALSE	canonical	3	131	junction_7	91.006850915633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5811	False	NA	-31	True	AATAAA	-17	NA	46593947	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
Isoform_6832_9	chr10	+	2178	16	NIC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	44.6186806916864	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5877	False	NA	27	True	AATAAA	-36	NA	78410811	78420333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_78410830_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_68330_16	chr17	-	3351	9	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	131	junction_6	96.4461475384061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5829	False	NA	-31	True	AATAAA	-17	NA	46593929	46568800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
Isoform_6834_17	chr10	+	2589	12	FSM	ENSMUSG00000032763.12	ENSMUST00000218875.2	3020	12	428	3	-8	-1	multi-exon	FALSE	canonical	3	132	junction_8	17.4725286148956	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5914	False	NA	27	True	AATAAA	-36	NA	78410848	78420333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297
Isoform_68343_75	chr17	-	4841	21	FSM	ENSMUSG00000032842.14	ENSMUST00000167360.8	4866	21	28	-3	2	3	multi-exon	TRUE	canonical	3	24	junction_18	9.45832966226067	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATACTATTTCTGGTG	7140	False	NA	9	True	GATAAA	-27	NA	46638921	46614143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
Isoform_68344_3	chr17	-	3352	18	NIC	ENSMUSG00000032842.14	novel	5266	20	NA	NA	1372	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	13.8743745767582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGTGTTTTAAAAAAAT	6942	False	NA	-4	True	GATAAA	-14	NA	46633186	46614156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624978_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062
Isoform_68345_5	chr17	-	4905	20	FSM	ENSMUSG00000032842.14	ENSMUST00000047970.14	4885	20	-17	-3	1	0	multi-exon	FALSE	canonical	3	24	junction_17	9.55491490762564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7139	False	NA	-3	True	GATAAA	-15	NA	46638922	46614155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46614579_46614838_46614952_46615082_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
Isoform_68346_3	chr17	-	2286	2	FSM	ENSMUSG00000032842.14	ENSMUST00000165733.2	2283	2	0	-3	0	3	multi-exon	FALSE	canonical	3	48	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATCTTCAACTTGCAAT	7138	False	NA	NA	False	TATAAA	-22	NA	46638923	46633780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46635841_46638697
Isoform_68347_6	chr17	-	675	3	ISM	ENSMUSG00000067144.8	ENSMUST00000233715.2	1410	10	3863	-171	3863	-59	3prime_fragment	FALSE	canonical	3	32	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGGGAAGTCATTGA	7508	False	NA	NA	False	AATAAA	-31	NA	46744692	46743167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_46743444_46743872_46744080_46744500
Isoform_68348_3	chr17	-	1692	9	ISM	ENSMUSG00000067144.8	ENSMUST00000233715.2	1410	10	-20	-171	-20	-59	intron_retention	FALSE	canonical	3	10	junction_7	10.8282039138539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGGGAAGTCATTGA	3625	False	NA	NA	False	AATAAA	-31	NA	46748575	46743167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_46743444_46743872_46744080_46744500_46744610_46744774_46744990_46745474_46745585_46745810_46745935_46747734_46747904_46748004_46748160_46748248
Isoform_68349_15	chr17	-	1957	10	FSM	ENSMUSG00000067144.8	ENSMUST00000087012.7	1989	10	-27	59	-27	-59	multi-exon	FALSE	canonical	3	9	junction_9	10.8297714942322	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGGGAAGTCATTGA	2790	False	NA	NA	False	AATAAA	-31	NA	46749410	46743167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46743444_46743872_46744080_46744500_46744610_46744774_46744990_46745474_46745585_46745810_46745935_46747734_46747904_46748004_46748160_46748248_46748353_46748922
Isoform_68351_144	chr17	-	2627	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-17	6	-17	-6	multi-exon	FALSE	canonical	3	76	junction_2	5.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTAACTTTTTTTT	NA	False	NA	-11	True	TATAAA	-12	NA	46867118	46859260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
Isoform_68353_10	chr17	-	2678	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-67	5	-67	-5	multi-exon	FALSE	canonical	3	76	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTAACTTTTTTTTA	NA	False	NA	-10	True	TATAAA	-13	NA	46867168	46859259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
Isoform_68354_9	chr17	-	4123	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-18	-1489	-18	1489	multi-exon	FALSE	canonical	3	76	junction_2	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGGTCTTTGGCTGTG	NA	False	NA	-3	True	AATAAA	-20	NA	46867119	46857765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
Isoform_68358_3	chr17	-	3765	6	NIC	ENSMUSG00000015605.7	novel	2616	7	NA	NA	148	1489	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	30.5587957877924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGGTCTTTGGCTGTG	NA	False	NA	-3	True	AATAAA	-20	NA	46866953	46857765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46860105_46860361_46860439_46861826_46861947_46862456_46862719_46864485_46864753_46866253
Isoform_68359_9	chr17	-	2445	6	NIC	ENSMUSG00000015605.7	novel	2616	7	NA	NA	-16	5	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	30.5587957877924	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTAATGGCGTTTT	NA	False	NA	0	True	TATAAA	-23	NA	46867117	46859249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46860105_46860361_46860439_46861826_46861947_46862456_46862719_46864485_46864753_46866253
Isoform_6837_9	chr10	+	2336	14	FSM	ENSMUSG00000032763.12	ENSMUST00000218215.2	2331	14	1	-6	1	-2	multi-exon	FALSE	canonical	3	132	junction_8	17.1491887433841	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5895	False	NA	26	True	AATAAA	-35	NA	78410829	78420332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711
Isoform_6838_339	chr10	+	2213	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	40	-20	11	-1	multi-exon	FALSE	canonical	3	132	junction_8	19.815990244945	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5933	False	NA	27	True	AATAAA	-36	NA	78410867	78420333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_68381_1256	chr17	-	4182	20	FSM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	53	0	53	0	multi-exon	FALSE	canonical	3	399	junction_15	41.2008794247642	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940377	46875396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
Isoform_68382_293	chr17	-	4220	20	FSM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	15	0	15	0	multi-exon	FALSE	canonical	3	399	junction_15	41.2008794247642	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940415	46875396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
Isoform_68387_24	chr17	-	3217	13	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	15	10766	15	-10766	5prime_fragment	FALSE	canonical	3	399	junction_8	43.6471807667905	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAGGCATGGTAATTC	NA	False	NA	NA	False	AATAAA	-15	NA	46940415	46886162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
Isoform_68390_13	chr17	-	2955	16	FSM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	-629	-4	249	-3	multi-exon	FALSE	canonical	3	33	junction_15	25.3531501439608	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46956699	46941552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006
Isoform_68393_50	chr17	-	2371	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	30.5511226266728	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46956936	46941552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956900
Isoform_68394_16	chr17	-	2451	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	-68	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	30.5511226266728	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46957016	46941552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956900
Isoform_68395_16	chr17	-	2636	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	231	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	32.0511675879366	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46956717	46941552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956416
Isoform_68396_98	chr17	-	2298	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	12	3	12	-3	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46956936	46941552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
Isoform_68397_33	chr17	-	2357	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	-44	0	-44	0	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCGGAGTCTTCATTG	NA	False	NA	-2	True	AATAAA	-18	NA	46956992	46941549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
Isoform_68398_5	chr17	-	2476	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	-166	3	-166	-3	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46957114	46941552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
Isoform_68400_283	chr17	-	1245	7	FSM	ENSMUSG00000023971.10	ENSMUST00000024766.7	1195	7	-49	-1	-17	1	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	46985230	46978382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
Isoform_68405_7	chr17	-	1145	4	FSM	ENSMUSG00000023971.10	ENSMUST00000233247.2	406	4	-34	-705	-17	215	multi-exon	FALSE	canonical	3	56	junction_3	166.85522666871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAGGCATGCACCAG	NA	False	NA	NA	False	NA	NA	NA	46985230	46978168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46985122
Isoform_68416_19	chr17	-	1928	12	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	123.384435842875	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991302	46985479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991267
Isoform_68418_670	chr17	-	1984	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	112	4	-3	-1	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991718	46985479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
Isoform_68419_394	chr17	-	2122	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	-24	2	-14	1	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTCCTATTTCTGGCG	NA	False	NA	-2	True	TATAAA	-15	NA	46991854	46985477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
Isoform_6842_3	chr10	+	2176	10	FSM	ENSMUSG00000005357.10	ENSMUST00000005490.10	2029	10	-147	0	-147	0	multi-exon	TRUE	canonical	0	0	junction_5	0.737027731190089	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAACGTGTGTTCATCAC	NA	False	NA	NA	False	GATAAA	-18	NA	78616182	78650599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_78616516_78623595_78623799_78624792_78624931_78626998_78627204_78629123_78629167_78631757_78632102_78635862_78636097_78637635_78637831_78648635_78648771_78650253
Isoform_68426_32	chr17	-	1955	11	FSM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	0	-1	0	1	multi-exon	FALSE	canonical	3	47	junction_10	118.520082686438	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTCCTATTTCTGGCG	NA	False	NA	-2	True	TATAAA	-15	NA	46991840	46985477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
Isoform_6843_12	chr10	+	1397	5	FSM	ENSMUSG00000020310.10	ENSMUST00000020554.8	1436	5	38	1	10	-1	multi-exon	FALSE	canonical	2	3	junction_4	3.08220700148449	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGGCATATTCTTTC	3193	False	NA	NA	False	AATAAA	-13	NA	79500430	79504370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79500502_79500745_79501013_79501264_79501592_79502172_79502605_79504070
Isoform_68430_16	chr17	-	1732	10	NIC	ENSMUSG00000063576.13	novel	1954	11	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_9	133.12214756696	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991832	46985479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46991627
Isoform_6844_3	chr10	+	1716	5	FSM	ENSMUSG00000020310.10	ENSMUST00000020554.8	1436	5	-280	0	-280	0	multi-exon	FALSE	canonical	2	3	junction_4	3.08220700148449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGGCATATTCTTTCG	2875	False	NA	NA	False	AATAAA	-14	NA	79500112	79504371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79500502_79500745_79501013_79501264_79501592_79502172_79502605_79504070
Isoform_68447_1330	chr17	-	2905	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	21	0	21	0	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1130	False	NA	NA	False	AATAAA	-15	NA	47015907	46993916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
Isoform_6845_498	chr10	+	1073	2	FSM	ENSMUSG00000020308.8	ENSMUST00000239401.2	1101	2	29	-1	29	0	multi-exon	FALSE	canonical	3	316	junction_1	0	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	8035	False	NA	11	True	AATAAA	-13	NA	79505272	79511961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79505618_79511233
Isoform_68452_200	chr17	-	2908	15	FSM	ENSMUSG00000059409.10	ENSMUST00000233988.2	3038	15	130	0	21	0	multi-exon	FALSE	canonical	3	79	junction_14	104.207504919908	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1130	False	NA	NA	False	AATAAA	-15	NA	47015907	46993916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011076_47015758
Isoform_68456_53	chr17	-	3039	14	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	21	0	intron_retention	FALSE	canonical	3	369	junction_8	38.3709702893574	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1130	False	NA	NA	False	AATAAA	-15	NA	47015907	46993916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
Isoform_68459_12	chr17	-	1093	6	FSM	ENSMUSG00000002769.10	ENSMUST00000002846.9	1035	6	-59	1	-59	-1	multi-exon	FALSE	canonical	3	17	junction_3	8.1338797630651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCCTGGTGTTTCT	2920	False	NA	NA	False	AGTAAA	-22	NA	47040153	47036590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47036898_47036986_47037109_47037194_47037338_47037531_47037643_47038190_47038319_47039871
Isoform_68460_30	chr17	-	1036	6	FSM	ENSMUSG00000002769.10	ENSMUST00000002846.9	1035	6	-2	1	-2	-1	multi-exon	FALSE	canonical	3	17	junction_3	8.1338797630651	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCCTGGTGTTTCT	2977	False	NA	NA	False	AGTAAA	-22	NA	47040096	47036590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47036898_47036986_47037109_47037194_47037338_47037531_47037643_47038190_47038319_47039871
Isoform_68462_810	chr17	-	1837	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	19	52	0	-1	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGCTACTGCTATGA	NA	False	NA	-19	True	NA	NA	NA	47063121	47046682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
Isoform_68463_26	chr17	-	1873	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	33	2	-4	-2	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCCAAAGGGGTTTTGA	NA	False	NA	31	True	NA	NA	NA	47063107	47046632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
Isoform_68468_14	chr17	-	1918	7	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	244.580593397487	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCTACTGCTATGAAT	NA	False	NA	-17	True	NA	NA	NA	47063142	47046680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47054310_47054369_47058346_47058471_47062898
Isoform_6847_10	chr10	+	1560	2	FSM	ENSMUSG00000020308.8	ENSMUST00000020552.8	1143	2	-417	0	-417	0	multi-exon	FALSE	canonical	3	316	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	7548	False	NA	11	True	AATAAA	-13	NA	79504785	79511961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79505618_79511233
Isoform_68470_17	chr17	-	2282	5	NIC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-7	1	intron_retention	FALSE	canonical	3	416	junction_3	46.8268085609088	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCTACTGCTATGAAT	NA	False	NA	-17	True	NA	NA	NA	47063130	47046680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_47047835_47048100_47048776_47054111_47054209_47058346_47058471_47062898
Isoform_68487_721	chr17	-	2013	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	2	591	2	-591	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCGTGTGAGTACATG	NA	False	NA	-3	True	AGTAAA	-16	NA	47093580	47085423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
Isoform_68488_274	chr17	-	2600	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	2	4	2	-4	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAAGAGCCGTTCGC	NA	False	NA	NA	False	NA	NA	NA	47093580	47084836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
Isoform_6849_11	chr10	+	888	2	FSM	ENSMUSG00000020308.8	ENSMUST00000219585.2	368	2	9	-529	9	0	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	8488	False	NA	11	True	AATAAA	-13	NA	79505725	79511961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79505886_79511233
Isoform_68490_826	chr17	-	1411	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	1	1194	1	-1194	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093581	47086026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
Isoform_68498_3	chr17	-	4098	4	ISM	ENSMUSG00000036568.8	ENSMUST00000040624.7	6575	11	22870	5	3642	-5	3prime_fragment	FALSE	canonical	3	134	junction_1	5.43650214343336	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACGTGTCACTGTGATT	NA	False	NA	-9	True	AATACA	-14	NA	47119469	47109050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274
Isoform_68501_14	chr17	-	4256	6	ISM	ENSMUSG00000036568.8	ENSMUST00000040624.7	6575	11	19344	3	116	-3	3prime_fragment	FALSE	canonical	3	125	junction_4	7.22772439983706	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGTCACTGTGATTGT	NA	False	NA	-7	True	AATACA	-16	NA	47122995	47109048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849
Isoform_68505_20	chr17	-	4300	7	NIC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-44	-5	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	45.4266808531433	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACGTGTCACTGTGATT	NA	False	NA	-9	True	AATACA	-14	NA	47123155	47109050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123064
Isoform_68511_10	chr17	-	6416	12	NIC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-217	-6	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	40.0510005446568	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACGTGTCACTGTGAT	NA	False	NA	-10	True	AATACA	-13	NA	47169625	47109051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361
Isoform_68512_22	chr17	-	6202	12	NIC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	40.0510005446568	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACGTGTCACTGTGATT	NA	False	NA	-9	True	AATACA	-14	NA	47169410	47109050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361
Isoform_68513_14	chr17	-	6304	12	NIC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-102	-3	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	40.0510005446568	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGTCACTGTGATTGT	NA	False	NA	-7	True	AATACA	-16	NA	47169510	47109048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361
Isoform_68514_33	chr17	-	4233	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-246	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	43.9523100138725	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGTCACTGTGATTG	NA	False	NA	-8	True	AATACA	-15	NA	47123357	47109049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
Isoform_68515_5	chr17	-	1753	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-293	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	43.9523100138725	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTAAAGACTTTCTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	47123404	47111576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
Isoform_6852_1680	chr10	+	1241	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	24	1	24	-1	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAGAGAATCACCTAGG	NA	False	NA	20	True	AATAAA	-20	NA	79518052	79524231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
Isoform_68521_57	chr17	-	5688	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	11	-8	-1	2	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCAGTTTTATTTTTC	NA	False	NA	-3	True	AATAAA	-18	NA	47321447	47241166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
Isoform_68522_15	chr17	-	5723	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	-27	-5	-3	-1	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCCCAGTTTTATTT	NA	False	NA	-6	True	AATAAA	-15	NA	47321485	47241169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
Isoform_68523_9	chr17	-	7718	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	-69	-1958	-45	4	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTCC	NA	False	NA	0	True	AATAAA	-21	NA	47321527	47239216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
Isoform_68524_10	chr17	-	7647	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	1	-1957	1	3	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGCCTCCATCTTCTC	NA	False	NA	-1	True	AATAAA	-20	NA	47321457	47239217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
Isoform_68526_10	chr17	-	5766	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	-82	1949	-46	-1	multi-exon	FALSE	canonical	3	27	junction_37	23.6319046780947	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCCCAGTTTTATTT	NA	False	NA	-6	True	AATAAA	-15	NA	47321528	47241169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
Isoform_68527_24	chr17	-	5688	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	-1	1946	-1	2	multi-exon	FALSE	canonical	3	27	junction_37	23.6319046780947	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCAGTTTTATTTTTC	NA	False	NA	-3	True	AATAAA	-18	NA	47321447	47241166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
Isoform_68528_11	chr17	-	7653	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	-20	0	-8	0	multi-exon	FALSE	canonical	3	27	junction_37	23.6319046780947	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTTTTGCCTCCATCTT	NA	False	NA	-4	True	AATAAA	-17	NA	47321466	47239220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
Isoform_6853_128	chr10	+	1072	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAGAGAATCACCTAGG	NA	False	NA	20	True	AATAAA	-20	NA	79518049	79524231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_79518061_79518232_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
Isoform_68531_3	chr17	-	1343	3	ISM	ENSMUSG00000023977.16	ENSMUST00000225599.2	3625	29	17	35760	-7	-35760	5prime_fragment	FALSE	canonical	3	89	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGTGGGACGAGCC	NA	False	NA	NA	False	NA	NA	NA	47321465	47303310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_47303996_47311511_47311772_47321067
Isoform_68532_6	chr17	-	763	2	ISM	ENSMUSG00000023977.16	ENSMUST00000225599.2	3625	29	10	43863	10	-43863	5prime_fragment	FALSE	canonical	3	100	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAATATTCACGAAATGA	NA	False	NA	NA	False	AATAAA	-11	NA	47321472	47311413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_47311772_47321067
Isoform_68533_3	chr17	-	566	2	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	5170	4	5170	-4	3prime_fragment	FALSE	canonical	3	65	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCAGAGTCTCAGCTT	7006	False	NA	-4	True	NA	NA	NA	47706339	47705486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_47705746_47706032
Isoform_68534_30	chr17	-	512	3	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	4881	1	4881	-1	3prime_fragment	FALSE	canonical	3	65	junction_1	4	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAGTCTCAGCTTTTT	6717	False	NA	-1	True	NA	NA	NA	47706628	47705483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_47705746_47706032_47706127_47706472
Isoform_68535_4	chr17	-	533	3	NNC	ENSMUSG00000023982.9	novel	873	4	NA	NA	4870	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	29	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAGTCTCAGCTTTTT	6706	False	NA	-1	True	NA	NA	NA	47706639	47705483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_47705746_47706032_47706127_47706462
Isoform_68536_45	chr17	-	1264	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233174.2	1263	8	0	-1	0	1	multi-exon	FALSE	canonical	3	30	junction_1	61.3926805449135	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTATTTATTATTATAT	NA	False	NA	NA	False	AATAAA	-20	NA	47813212	47794287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47794760_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_68539_438	chr17	-	2548	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	5	231	0	1	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAGGGCCTCTCAAATG	NA	False	NA	-3	True	AATAAA	-32	NA	47813212	47799205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_68542_7	chr17	-	5815	8	NIC	ENSMUSG00000023980.8	novel	2784	9	NA	NA	5	-6	intron_retention	FALSE	canonical	3	80	junction_1	44.4889346480948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGACATAGGGCCTC	NA	False	NA	-10	True	AATAAA	-25	NA	47813207	47799212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_47800822_47801067_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_68543_28	chr17	-	2408	8	NIC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	67.8948767265564	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAGGGCCTCTCAAATG	NA	False	NA	-3	True	AATAAA	-32	NA	47813212	47799205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_47800822_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_68545_44	chr17	-	2796	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233121.2	2793	8	0	-3	0	3	multi-exon	FALSE	canonical	3	89	junction_1	41.4984632122636	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGGCCTCTCAAATGGT	NA	False	NA	-1	True	AATAAA	-34	NA	47813212	47799203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_68547_63	chr17	-	1305	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	2	385	0	-385	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTACTATTCTGGTAGC	NA	False	NA	-9	True	AATAAA	-16	NA	47813212	47803973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_68550_9	chr17	-	6053	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	2	-4363	0	-19	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTTGTAAATGACTCA	NA	False	NA	-23	True	AATAAA	-12	NA	47813212	47799225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_68553_480	chr17	-	2547	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	258	1049	258	-1049	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGTTTGGTCTGTTGAG	2599	False	NA	-2	True	NA	NA	NA	47922159	47911304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
Isoform_68554_565	chr17	-	1694	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	255	1905	255	-1905	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTTGGTCCCT	2596	False	NA	-2	True	AAAACA	-18	NA	47922162	47912160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
Isoform_68556_105	chr17	-	3596	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	259	-1	259	1	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTAAGACCCCACAATCA	2600	False	NA	-5	True	AATAAA	-18	NA	47922158	47910254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
Isoform_68557_45	chr17	-	2846	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	-40	1048	-40	-1048	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTTTGGTCTGTTGAGT	2301	False	NA	-1	True	NA	NA	NA	47922457	47911303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
Isoform_68559_80	chr17	-	1989	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	-40	1905	-40	-1905	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTTGGTCCCT	2301	False	NA	-2	True	AAAACA	-18	NA	47922457	47912160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
Isoform_68568_1043	chr17	-	504	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	148	97	33	-3	multi-exon	FALSE	canonical	3	3748	junction_1	369	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGGTATTTTATTCT	NA	False	NA	-15	True	AATAAA	-12	NA	47998960	47997667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47997934_47998112_47998214_47998823
Isoform_68569_303	chr17	-	552	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	99	98	-16	-4	multi-exon	FALSE	canonical	3	3748	junction_1	369	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGGTATTTTATTC	NA	False	NA	-16	True	AATAAA	-11	NA	47999009	47997668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47997934_47998112_47998214_47998823
Isoform_68576_41	chr17	-	558	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	33	3	33	-3	multi-exon	FALSE	canonical	3	227	junction_1	2129.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGGTATTTTATTCT	NA	False	NA	-15	True	AATAAA	-12	NA	47998960	47997667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_47997988_47998112_47998214_47998823
Isoform_68578_3	chr17	-	1133	6	NIC	ENSMUSG00000096549.10	novel	686	4	NA	NA	-17	-2	combination_of_known_junctions	TRUE	canonical	1	1	junction_2	1.83303027798234	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTATAAGGCGTGGTT	NA	False	NA	NA	False	NA	NA	NA	48005678	48000504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48000800_48000982_48001187_48001498_48001637_48002281_48002390_48003259_48003405_48005435
Isoform_6858_166	chr10	+	1304	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	-40	2	-40	2	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	19	True	AATAAA	-19	NA	79517988	79524230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
Isoform_68580_19	chr17	-	1572	4	ISM	ENSMUSG00000032717.15	ENSMUST00000035375.14	1371	5	19	-6	0	-2	intron_retention	FALSE	canonical	2	6	junction_1	0.942809041582063	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAGGACTCTTTACA	2111	False	NA	-4	True	AATAAA	-20	NA	48144197	48126254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868
Isoform_68582_27	chr17	-	1356	5	FSM	ENSMUSG00000032717.15	ENSMUST00000035375.14	1371	5	19	-4	0	-4	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCCCCAGGACTCTTTA	2111	False	NA	-6	True	AATAAA	-18	NA	48144197	48126256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868_48143956_48144169
Isoform_68583_3	chr17	-	1428	5	FSM	ENSMUSG00000032717.15	ENSMUST00000066368.13	1711	5	281	2	281	-2	multi-exon	FALSE	canonical	0	0	junction_4	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAGGACTCTTTACA	973	False	NA	-4	True	AATAAA	-20	NA	48145335	48126254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868_48143956_48145237
Isoform_68584_3	chr17	-	910	2	NNC	ENSMUSG00000032717.15	novel	580	3	NA	NA	14608	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAGGACTCTTTACA	NA	False	NA	-4	True	AATAAA	-20	NA	48129486	48126254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_48127090_48129411
Isoform_68587_54	chr17	-	3188	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	170	641	1	-6	multi-exon	FALSE	canonical	3	59	junction_11	26.5099480148491	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235400	48178698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68589_20	chr17	-	3382	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	-17	634	-17	1	multi-exon	FALSE	canonical	3	59	junction_11	26.5099480148491	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTTTGTTGGCTTTTT	NA	False	NA	-6	True	NA	NA	NA	48235587	48178691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68590_4	chr17	-	3994	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	5	0	5	0	multi-exon	FALSE	canonical	3	59	junction_11	26.5099480148491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGTGTCACCAAGG	NA	False	NA	-2	True	ATTAAA	-18	NA	48235565	48178057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68591_6	chr17	-	3844	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	155	0	-14	0	multi-exon	TRUE	canonical	3	59	junction_11	26.5099480148491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGTGTCACCAAGG	NA	False	NA	-2	True	ATTAAA	-18	NA	48235415	48178057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68595_124	chr17	-	3191	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	1	6	1	-6	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235400	48178698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68597_48	chr17	-	3373	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	-181	6	-12	-6	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235582	48178698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68599_7	chr17	-	3995	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	-164	-633	5	-2	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTGTGTGTGTCACCAA	NA	False	NA	-4	True	ATTAAA	-16	NA	48235565	48178059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68601_6	chr17	-	4052	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	-219	-635	-50	0	multi-exon	TRUE	canonical	3	96	junction_11	19.4871752699051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGTGTCACCAAGG	NA	False	NA	-2	True	ATTAAA	-18	NA	48235620	48178057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68602_7	chr17	-	3225	17	NIC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	39.6781977287275	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235401	48178698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68603_11	chr17	-	3227	17	FSM	ENSMUSG00000023991.17	ENSMUST00000097311.9	3197	17	-40	10	1	-6	multi-exon	FALSE	canonical	3	24	junction_7	35.8812603422734	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235400	48178698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_68605_7	chr17	-	2405	3	FSM	ENSMUSG00000023991.17	ENSMUST00000153752.2	788	3	-19	-1598	-10	1598	multi-exon	FALSE	canonical	3	147	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATGAGAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	48235370	48197219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48199146_48215220_48215460_48235130
Isoform_68607_20	chr17	-	3610	10	NIC	ENSMUSG00000023994.14	novel	3653	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	14.6245185633537	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGTGACTGGATTTTT	NA	False	NA	-14	True	AATAAA	-16	NA	48716778	48693922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706094_48707465_48707609_48716653
Isoform_68608_18	chr17	-	3615	10	FSM	ENSMUSG00000023994.14	ENSMUST00000160319.8	1407	10	-20	-2188	0	3	multi-exon	FALSE	canonical	3	12	junction_8	15.1053910742547	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716778	48693920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706097_48707465_48707609_48716653
Isoform_68609_5	chr17	-	3623	10	NIC	ENSMUSG00000023994.14	novel	3653	10	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	17.0235856721139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716792	48693920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706012_48706094_48707465_48707609_48716653
Isoform_68610_8	chr17	-	3598	10	NIC	ENSMUSG00000023994.14	novel	1407	10	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	17.4065405615529	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716764	48693920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706012_48706097_48707465_48707609_48716653
Isoform_68612_22	chr17	-	3526	9	NIC	ENSMUSG00000023994.14	novel	1407	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	13.067134345372	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGTGACTGGATTTTT	NA	False	NA	-14	True	AATAAA	-16	NA	48716778	48693922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
Isoform_68613_22	chr17	-	3615	10	FSM	ENSMUSG00000023994.14	ENSMUST00000078800.13	3653	10	30	8	-5	3	multi-exon	TRUE	canonical	3	15	junction_8	14.2837212013545	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716763	48693920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706094_48707465_48707609_48716653
Isoform_68618_9	chr17	-	3638	10	FSM	ENSMUSG00000023994.14	ENSMUST00000046719.14	3645	10	12	-5	-3	-2	multi-exon	TRUE	canonical	3	12	junction_8	14.7832070227182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACTGGATTTTTGGTG	NA	False	NA	-10	True	AATAAA	-20	NA	48716781	48693918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706097_48707465_48707609_48716653
Isoform_68619_5	chr17	-	3627	10	NIC	ENSMUSG00000023994.14	novel	3653	10	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	16.7648957167965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716778	48693920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706012_48706094_48707465_48707609_48716653
Isoform_68620_4	chr17	-	3629	10	NIC	ENSMUSG00000023994.14	novel	3645	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	17.1601030242382	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGACTGGATTTTTG	NA	False	NA	-13	True	AATAAA	-17	NA	48716778	48693921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706012_48706097_48707465_48707609_48716653
Isoform_68621_59	chr17	-	3544	9	FSM	ENSMUSG00000023994.14	ENSMUST00000162460.8	3706	9	158	4	2	3	multi-exon	FALSE	canonical	3	22	junction_4	12.5492778676703	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716776	48693920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
Isoform_68625_65	chr17	-	1223	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	198	-1	-114	1	multi-exon	FALSE	canonical	3	57	junction_2	11.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGCCTGTTCTCTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	48739760	48726257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48726662_48729968_48730534_48739506
Isoform_68627_21	chr17	-	952	5	FSM	ENSMUSG00000023995.13	ENSMUST00000024794.12	956	5	5	-1	0	1	multi-exon	FALSE	canonical	3	26	junction_4	2.06155281280883	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGGTGTAAGGTGGAA	NA	False	NA	0	True	AATAAA	-20	NA	48758545	48755461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_48755829_48756047_48756190_48756910_48757099_48757899_48758090_48758480
Isoform_68628_3	chr17	-	1170	4	NIC	ENSMUSG00000023995.13	novel	956	5	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	26	junction_3	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGCCTGGTGTAAGGTG	NA	False	NA	-3	True	AATAAA	-17	NA	48758547	48755464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48756190_48756910_48757099_48757899_48758090_48758480
Isoform_68629_5	chr17	-	3330	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	16	683	16	320	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCTTTTTAAGCTTTA	NA	False	NA	NA	False	ATTAAA	-27	NA	50497686	50299967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
Isoform_68631_101	chr17	-	3010	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	17	1002	17	1	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGTGAGAAGTATTT	NA	False	NA	-27	True	AATAAA	-14	NA	50497685	50300286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
Isoform_68633_101	chr17	-	2812	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	215	1002	38	1	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGTGAGAAGTATTT	NA	False	NA	-27	True	AATAAA	-14	NA	50497487	50300286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
Isoform_68637_6	chr17	-	3141	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	192	696	15	307	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTGTTCAGCCATATC	NA	False	NA	NA	False	ATTAAA	-14	NA	50497510	50299980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
Isoform_68645_512	chr17	-	2934	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	39	3	2	-3	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATCACTGACTTACTG	NA	False	NA	-8	True	AATAAA	-13	NA	50600625	50586427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
Isoform_68654_204	chr17	-	2882	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATCACTGACTTACT	NA	False	NA	-9	True	AATAAA	-12	NA	50600625	50586428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
Isoform_68659_12	chr17	-	5583	22	FSM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	-150	2	-7	-2	multi-exon	TRUE	canonical	2	15	junction_3	5.14990698460791	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACATCCACTTCTTCCA	NA	False	NA	NA	False	AATAAA	-18	NA	51486346	51040153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
Isoform_68663_3	chr17	-	4310	11	FSM	ENSMUSG00000023927.16	ENSMUST00000152830.9	5993	11	1680	3	-644	2	multi-exon	FALSE	canonical	3	34	junction_1	11.1821285987955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAGAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52120352	52046501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795
Isoform_68664_4	chr17	-	3749	11	FSM	ENSMUSG00000023927.16	ENSMUST00000144331.8	6243	11	26	2468	26	239	multi-exon	FALSE	canonical	3	5	junction_10	18.7245827723877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGGGTTTGTCTGCTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	52139674	52045682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52139497
Isoform_68665_3	chr17	-	3823	11	FSM	ENSMUSG00000023927.16	ENSMUST00000144331.8	6243	11	-53	2473	-53	234	multi-exon	FALSE	canonical	3	5	junction_10	18.7245827723877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGGCAGGGTTTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	52139753	52045687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52139497
Isoform_68666_7	chr17	-	2199	13	FSM	ENSMUSG00000023931.6	ENSMUST00000024725.5	2661	13	463	-1	448	1	multi-exon	TRUE	canonical	2	7	junction_1	9.14998482087387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCCTGGTTTTGCTGT	NA	False	NA	-3	True	ATTAAA	-15	NA	53769886	53705915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_53706148_53707773_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
Isoform_68667_8	chr17	-	4031	12	ISM	ENSMUSG00000023931.6	ENSMUST00000024725.5	2661	13	-11	267	-11	-8	5prime_fragment	FALSE	canonical	2	16	junction_3	7.09440473277333	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTTGTTCTGGACTTA	NA	False	NA	NA	False	NA	NA	NA	53770360	53706183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
Isoform_68674_17	chr17	-	2282	9	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	52	-1270	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	149.294538999255	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTATGTGTGTATGTA	NA	False	NA	-5	True	AATAAA	-22	NA	53996254	53983083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996207
Isoform_68675_382	chr17	-	2309	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	49	1270	2	-1270	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTATGTGTGTATGTA	NA	False	NA	-5	True	AATAAA	-22	NA	53996312	53983083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
Isoform_68676_52	chr17	-	2371	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	-12	1269	-12	-1269	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTATGTGTGTATGTAT	NA	False	NA	-4	True	AATAAA	-23	NA	53996373	53983082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
Isoform_68677_289	chr17	-	3571	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	53	4	-2	-4	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTCAGTTGCCGCTTAC	NA	False	NA	-4	True	AATAAA	-26	NA	53996308	53981817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
Isoform_68678_41	chr17	-	3649	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	-21	0	-21	0	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTGCCGCTTACTTTT	NA	False	NA	0	True	AATAAA	-30	NA	53996382	53981813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
Isoform_68682_10	chr17	-	2175	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-2	-1269	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	157.427275078925	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTATGTGTGTATGTAT	NA	False	NA	-4	True	AATAAA	-23	NA	53996308	53983082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53996238
Isoform_68695_5	chr17	-	4275	18	NNC	ENSMUSG00000024174.10	novel	3523	17	NA	NA	0	759	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.93219758242646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTGTTTTATTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	56019607	55958191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_55958751_55958786_55960519_55961766_55961873_55969462_55969555_55971316_55971406_55972647_55972784_55973411_55973618_55976739_55976897_55979830_55979894_55981051_55981141_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
Isoform_68696_5	chr17	-	2270	17	FSM	ENSMUSG00000024174.10	ENSMUST00000086876.7	3523	17	-29	1282	0	-1282	multi-exon	FALSE	canonical	1	2	junction_7	6.91804705101086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTTGAAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	56019607	55960232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_55960519_55961766_55961873_55969462_55969555_55971316_55971406_55972647_55972784_55973411_55973618_55976739_55976897_55979830_55979894_55981051_55981141_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
Isoform_68697_3	chr17	-	531	5	FSM	ENSMUSG00000024174.10	ENSMUST00000233301.2	1813	5	27	1255	6	-1255	multi-exon	FALSE	canonical	3	16	junction_3	2.54950975679639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTGTCAGGCATCAATT	NA	False	NA	NA	False	ATTAAA	-21	NA	56019601	56005348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
Isoform_68698_3	chr17	-	1765	4	FSM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	-38	291	-38	-291	multi-exon	FALSE	canonical	3	17	junction_3	5.43650214343336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTCCCCCACTGAGCT	NA	False	NA	NA	False	NA	NA	NA	56185968	56172182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56173651_56175302_56175364_56175558_56175686_56185859
Isoform_68699_9	chr17	-	2028	4	FSM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	-11	1	-11	-1	multi-exon	FALSE	canonical	3	17	junction_3	5.43650214343336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCATTCTCTTGGATAG	NA	False	NA	NA	False	AATAAA	-15	NA	56185941	56171892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56173651_56175302_56175364_56175558_56175686_56185859
Isoform_6870_193	chr10	+	1244	5	FSM	ENSMUSG00000020307.16	ENSMUST00000218964.2	979	5	-264	-1	15	1	multi-exon	FALSE	canonical	3	168	junction_4	778.055749930556	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCTGAGAGAATCACCTA	NA	False	NA	18	True	AATAAA	-18	NA	79518043	79524229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523686
Isoform_68702_30	chr17	-	1918	4	FSM	ENSMUSG00000062101.13	ENSMUST00000056147.14	1889	4	-28	-1	-28	1	multi-exon	FALSE	canonical	3	31	junction_3	5.90668171555645	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATATTTATGTTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	56252287	56245379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56252171
Isoform_68703_5	chr17	-	1508	13	FSM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	-4	5	-4	0	multi-exon	FALSE	canonical	1	3	junction_8	11.0839598820398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCCATGTGGCTGTA	NA	False	NA	-9	True	NA	NA	NA	56312588	56304081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900_56308002_56309011_56309069_56309852_56309976_56310129_56310202_56312429
Isoform_68704_6	chr17	-	813	5	NIC	ENSMUSG00000038781.8	novel	1597	12	NA	NA	-1787	5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	10.8972473588517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGTAGGATTGTGCC	NA	False	NA	1	True	NA	NA	NA	56307267	56304071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56307086
Isoform_68710_3102	chr17	-	2040	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	33	0	-26	0	multi-exon	FALSE	canonical	3	585	junction_1	54.5914116159513	3102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343602	56323749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
Isoform_68712_136	chr17	-	2080	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	-7	0	-7	0	multi-exon	FALSE	canonical	3	585	junction_1	54.5914116159513	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343642	56323749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
Isoform_68715_139	chr17	-	2120	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-29	0	intron_retention	FALSE	canonical	3	585	junction_1	56.6192050014834	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343605	56323749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
Isoform_68729_269	chr17	-	1412	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	52	1485	41	6	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGTCTCATGCTGTTC	6358	False	NA	-11	True	AATAAA	-21	NA	56381976	56375529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
Isoform_6873_30	chr10	+	1244	5	FSM	ENSMUSG00000020307.16	ENSMUST00000219930.2	534	5	-253	-457	14	-1	multi-exon	FALSE	canonical	3	123	junction_4	797.39838694344	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAGAGAATCACCTAGG	NA	False	NA	20	True	AATAAA	-20	NA	79518042	79524231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523689
Isoform_68730_256	chr17	-	1714	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	31	1204	20	1	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCCAGTGTTTCATCAG	6337	False	NA	-1	True	AATAAA	-18	NA	56381997	56375248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
Isoform_68732_7	chr17	-	1578	11	NNC	ENSMUSG00000019578.12	novel	2949	11	NA	NA	-95	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_10	74.3363302833816	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCCAGTGTTTCATCAG	6692	False	NA	-1	True	AATAAA	-18	NA	56381642	56375248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381616
Isoform_68735_13	chr17	-	1931	9	FSM	ENSMUSG00000011305.12	ENSMUST00000019808.12	1986	9	52	3	52	-3	multi-exon	FALSE	canonical	2	6	junction_1	3.19912097301743	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTAGGTTTTGGAACTT	1145	False	NA	NA	False	AATAAA	-17	NA	56424544	56418603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56419542_56419869_56419984_56420898_56421099_56422092_56422274_56422550_56422634_56423257_56423454_56423828_56423890_56424082_56424198_56424501
Isoform_68736_14	chr17	-	1261	8	ISM	ENSMUSG00000011305.12	ENSMUST00000019808.12	1986	9	51	1002	51	-996	5prime_fragment	FALSE	canonical	2	7	junction_2	3.09047252182628	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAAGATAGGCCAAGGC	1144	False	NA	NA	False	ATTAAA	-10	NA	56424545	56419602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_56419984_56420898_56421099_56422092_56422274_56422550_56422634_56423257_56423454_56423828_56423890_56424082_56424198_56424501
Isoform_68737_30	chr17	-	3771	17	FSM	ENSMUSG00000001227.13	ENSMUST00000001256.11	3736	17	-35	0	-35	0	multi-exon	FALSE	canonical	2	8	junction_2	3.37036719067819	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGACTCTGGGTCAGC	8316	False	NA	NA	False	AATAAA	-22	NA	56447378	56430084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56431918_56432332_56432392_56432516_56432595_56433216_56433367_56433449_56433633_56433939_56434090_56434477_56434610_56435249_56435468_56436407_56436497_56436972_56437093_56437705_56437797_56438112_56438215_56438522_56438586_56438742_56438804_56439497_56439622_56439715_56439869_56447213
Isoform_68738_1046	chr17	-	901	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	10	799	10	-799	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGATTCTCATCGTTT	NA	False	NA	-2	True	AATAAA	-43	NA	56490910	56483542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
Isoform_68739_17	chr17	-	961	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	-48	797	-48	-797	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGATTCTCATCGTTTTC	NA	False	NA	0	True	AATAAA	-45	NA	56490968	56483540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
Isoform_68740_179	chr17	-	1175	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	10	525	10	-525	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTATGCTCTCTCTGTGT	NA	False	NA	0	True	AATGAA	-21	NA	56490910	56483268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
Isoform_68741_57	chr17	-	1706	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	11	-7	11	7	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCTGAAGCCAAAGAACC	NA	False	NA	-22	True	NA	NA	NA	56490909	56482736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
Isoform_68743_8	chr17	-	3637	22	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	-4	130	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	37.462241005228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525893	56493676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496761_56496881_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
Isoform_68748_18	chr17	-	4808	20	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-15	-140	1	130	intron_retention	FALSE	canonical	3	120	junction_19	10.4521068400644	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525904	56493676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408
Isoform_68752_350	chr17	-	3525	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-15	-136	1	126	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAAGTGGTGCCGCAGT	NA	False	NA	NA	False	ATTAAA	-9	NA	56525904	56493680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
Isoform_68756_5	chr17	-	3662	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	280	133	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	31.2881367294379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525609	56493673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525315
Isoform_68758_7	chr17	-	4292	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	277	126	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	31.4942851958891	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAAGTGGTGCCGCAGT	NA	False	NA	NA	False	ATTAAA	-9	NA	56525612	56493680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56524681
Isoform_68761_16	chr17	-	2826	2	FSM	ENSMUSG00000047123.9	ENSMUST00000058136.9	2992	2	20	146	20	-146	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAGCGTCACCACACT	833	False	NA	NA	False	AATAAA	-20	NA	56583766	56576464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56579218_56583693
Isoform_68771_41	chr17	-	2215	7	ISM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	2522	1485	2522	-1485	3prime_fragment	TRUE	canonical	3	572	junction_5	31.4536696322279	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATGGTGTATATGTGT	NA	False	NA	-4	True	AATAAA	-22	NA	56594989	56585960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793
Isoform_68780_1501	chr17	-	2160	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	0	1485	0	-1485	multi-exon	FALSE	canonical	3	548	junction_7	40.8821102534533	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATGGTGTATATGTGT	NA	False	NA	-4	True	AATAAA	-22	NA	56597511	56585960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
Isoform_68813_12	chr17	-	3780	19	ISM	ENSMUSG00000013236.18	ENSMUST00000086828.10	5608	29	37051	-2	-32	2	3prime_fragment	FALSE	canonical	3	225	junction_14	33.16536383073	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGGAGTGCTCCTT	NA	False	NA	-3	True	ATTAAA	-18	NA	56732165	56719428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879
Isoform_68816_67	chr17	-	3976	20	ISM	ENSMUSG00000013236.18	ENSMUST00000067538.6	6855	33	50776	-7	-246	0	3prime_fragment	FALSE	canonical	3	104	junction_19	52.4364805029345	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGTGCTCCTTAAT	NA	False	NA	0	True	ATTAAA	-21	NA	56732707	56719425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326
Isoform_68821_20	chr17	-	6809	33	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	17	0	intron_retention	FALSE	canonical	3	62	junction_32	77.4089939461171	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56769199	56719430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
Isoform_68823_34	chr17	-	6857	33	FSM	ENSMUSG00000013236.18	ENSMUST00000067538.6	6855	33	0	-2	0	0	multi-exon	FALSE	canonical	3	94	junction_23	73.3638194207472	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56783483	56719430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
Isoform_68824_7	chr17	-	6164	32	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	4	0	intron_retention	FALSE	canonical	3	7	junction_19	79.9261235374598	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGTGCTCCTTAAT	NA	False	NA	0	True	ATTAAA	-21	NA	56783385	56719425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
Isoform_68830_6	chr17	-	5521	29	FSM	ENSMUSG00000013236.18	ENSMUST00000086828.10	5608	29	89	-2	34	2	multi-exon	FALSE	canonical	3	62	junction_28	67.8619077274443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGGAGTGCTCCTT	NA	False	NA	-3	True	ATTAAA	-18	NA	56769127	56719428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
Isoform_68831_44	chr17	-	5603	29	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	72	junction_19	61.8340747979821	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGGAGTGCTCCTT	NA	False	NA	-3	True	ATTAAA	-18	NA	56783445	56719428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
Isoform_68832_116	chr17	-	5569	29	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-22	2	combination_of_known_junctions	FALSE	canonical	3	72	junction_19	61.8340747979821	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGGAGTGCTCCTT	NA	False	NA	-3	True	ATTAAA	-18	NA	56783411	56719428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
Isoform_68833_7	chr17	-	4013	20	NNC	ENSMUSG00000013236.18	novel	5608	29	NA	NA	-248	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_19	71.5688847416103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56732709	56719430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732286
Isoform_68834_12	chr17	-	7196	32	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	13	-2	intron_retention	FALSE	canonical	3	94	junction_22	70.4444046885562	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGGAGTGCTCCTTA	NA	False	NA	-2	True	ATTAAA	-19	NA	56783470	56719427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
Isoform_68836_7	chr17	-	5550	28	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.8234090550069	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56783408	56719431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721808_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
Isoform_68837_6	chr17	-	2394	6	FSM	ENSMUSG00000013236.18	ENSMUST00000224571.2	2336	6	-55	-3	0	2	multi-exon	FALSE	canonical	3	132	junction_5	43.8296703158945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAGAACAA	NA	False	NA	NA	False	NA	NA	NA	56783444	56752844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
Isoform_68845_95	chr17	-	3246	21	FSM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	24	7	1	3	multi-exon	FALSE	canonical	3	72	junction_15	52.6718852899723	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891561	56869945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_68847_3	chr17	-	4130	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	4	2	intron_retention	FALSE	canonical	3	78	junction_14	48.9638342423458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACAAGGTTTCTGCTGC	NA	False	NA	-6	True	AATAAA	-23	NA	56891581	56869946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_68848_9	chr17	-	2612	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	5	4	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	62.0745240609714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGGTTTCTGCTGCCA	NA	False	NA	-4	True	AATAAA	-25	NA	56891580	56869944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_68851_3	chr17	-	4474	19	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	6	3	intron_retention	FALSE	canonical	3	31	junction_15	53.4392755643217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891518	56869945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_68857_24	chr17	-	3364	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	1	3	intron_retention	FALSE	canonical	3	72	junction_14	53.7949322598524	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891561	56869945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_6886_4275	chr10	+	1244	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	16	1	-1	-1	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	4275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540340	79547802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
Isoform_68860_4	chr17	-	1099	10	FSM	ENSMUSG00000042625.17	ENSMUST00000155983.2	1090	10	49	-58	-1	58	multi-exon	FALSE	canonical	3	24	junction_4	47.2215686229278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGACGTGGCGGCCC	NA	False	NA	NA	False	NA	NA	NA	56891513	56878209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_68861_4	chr17	-	3111	9	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-15	58	intron_retention	FALSE	canonical	3	101	junction_5	28.3480047798782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGACGTGGCGGCCC	NA	False	NA	NA	False	NA	NA	NA	56891600	56878209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_68862_3	chr17	-	4219	9	NIC	ENSMUSG00000042625.17	novel	1090	10	NA	NA	1	-5	intron_retention	FALSE	canonical	3	101	junction_5	28.3480047798782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56891584	56877085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_68863_3	chr17	-	4789	8	NIC	ENSMUSG00000042625.17	novel	1804	12	NA	NA	12	-5	intron_retention	FALSE	canonical	3	31	junction_4	48.5705882280246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56891550	56877085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56878320_56878399_56878550_56881201_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_68868_602	chr17	-	517	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	69	169	-20	-1	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCGGTTTTCTGGTGG	NA	False	NA	-26	True	AATAAA	-17	NA	56916702	56914620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
Isoform_68869_58	chr17	-	688	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	70	-3	-19	3	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTTGGATAGGAAAGG	NA	False	NA	-29	True	TTTAAA	-30	NA	56916701	56914448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
Isoform_6887_229	chr10	+	1289	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	-29	1	-29	-1	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540295	79547802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
Isoform_68871_124	chr17	-	643	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	-58	170	-58	-2	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCCGGTTTTCTGGTG	NA	False	NA	-27	True	AATAAA	-16	NA	56916829	56914621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
Isoform_68873_12	chr17	-	795	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	-39	-1	-39	1	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGCTTGGATAGGAAA	NA	False	NA	-31	True	TTTAAA	-28	NA	56916810	56914450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
Isoform_68898_2148	chr17	-	2946	18	FSM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	2	3	2	-3	multi-exon	FALSE	canonical	3	584	junction_15	77.1963747647298	2148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCCTAAGCCTGAGTCT	1573	False	NA	-15	True	AATAAA	-14	NA	56933885	56921299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
Isoform_68899_36	chr17	-	2999	18	FSM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	-51	3	-51	-3	multi-exon	FALSE	canonical	3	584	junction_15	77.1963747647298	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCCTAAGCCTGAGTCT	1520	False	NA	-15	True	AATAAA	-14	NA	56933938	56921299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
Isoform_68908_52	chr17	-	4254	16	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-3	intron_retention	FALSE	canonical	3	584	junction_13	78.4682242836055	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCCTAAGCCTGAGTCT	1573	False	NA	-15	True	AATAAA	-14	NA	56933885	56921299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
Isoform_68913_207	chr17	-	2088	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	137	1	137	-1	multi-exon	FALSE	canonical	3	64	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACTCTACCTTTTTT	7705	False	NA	-7	True	AATAAA	-15	NA	57023840	57020936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57022818_57023633
Isoform_68914_6	chr17	-	2120	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	105	1	105	-1	multi-exon	FALSE	canonical	3	64	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACTCTACCTTTTTT	7673	False	NA	-7	True	AATAAA	-15	NA	57023872	57020936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57022818_57023633
Isoform_68915_15	chr17	-	1971	2	FSM	ENSMUSG00000054723.7	ENSMUST00000164907.3	1965	2	-7	1	-2	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACTCTACCTTTTTT	6858	False	NA	-7	True	AATAAA	-15	NA	57024687	57020936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57022818_57024597
Isoform_68916_7	chr17	-	2061	2	FSM	ENSMUSG00000054723.7	ENSMUST00000233400.2	345	2	-30	-1686	-30	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACTCTACCTTTTTT	6493	False	NA	-7	True	AATAAA	-15	NA	57025052	57020936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57022818_57024872
Isoform_68917_203	chr17	-	1048	3	FSM	ENSMUSG00000039481.6	ENSMUST00000044752.6	1023	3	-25	0	-25	0	multi-exon	FALSE	canonical	3	134	junction_2	5	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCTGGTCGTTCATGC	NA	False	NA	-3	True	CATAAA	-15	NA	57064555	57058324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57058831_57059308_57059491_57064195
Isoform_68925_166	chr17	-	3445	18	FSM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	-94	-1	-89	1	multi-exon	FALSE	canonical	3	81	junction_12	62.8192882463543	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGTCCGTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	57138102	57082898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
Isoform_68928_31	chr17	-	3353	17	NIC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-89	1	combination_of_known_junctions	FALSE	canonical	3	62	junction_16	78.7249960304858	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGTCCGTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	57138102	57082898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57137882
Isoform_68929_391	chr17	-	3371	17	FSM	ENSMUSG00000024206.16	ENSMUST00000086801.7	3283	17	-90	2	-90	1	multi-exon	FALSE	canonical	3	178	junction_12	29.2883695986991	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGTCCGTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	57138103	57082898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
Isoform_68933_105	chr17	-	3279	16	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-89	-1	combination_of_known_junctions	TRUE	canonical	3	62	junction_15	59.2522292126353	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	57138102	57082897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57137882
Isoform_68940_211	chr17	-	3710	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	-75	1	-75	-1	multi-exon	FALSE	canonical	3	105	junction_9	16.3510052260045	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTGGCCTGCCTTCAA	5959	False	NA	-4	True	AATAAA	-14	NA	57242490	57199611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
Isoform_68943_21	chr17	-	3520	11	NIC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.9921943789302	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGGCCTGCCTTCAAT	6024	False	NA	-3	True	AATAAA	-15	NA	57242425	57199610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57212711_57212856_57226899_57226983_57233991_57234173_57242262
Isoform_68944_11	chr17	-	3583	11	NIC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-74	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.9921943789302	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTGGCCTGCCTTCAA	5960	False	NA	-4	True	AATAAA	-14	NA	57242489	57199611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57212711_57212856_57226899_57226983_57233991_57234173_57242262
Isoform_68950_776	chr17	-	1733	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	-13	-3	-13	3	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCGAGTCATCACTG	NA	False	NA	-3	True	AATAAA	-16	NA	57318301	57310401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
Isoform_68952_30	chr17	-	1871	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	-151	-3	-151	3	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCGAGTCATCACTG	NA	False	NA	-3	True	AATAAA	-16	NA	57318439	57310401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
Isoform_68986_336	chr17	-	4015	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-44	7	-10	-7	multi-exon	FALSE	canonical	3	570	junction_17	70.4455420481926	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338532	57328057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
Isoform_68991_26	chr17	-	4104	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-126	0	-92	0	multi-exon	TRUE	canonical	3	570	junction_17	70.4455420481926	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338614	57328050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
Isoform_68994_18	chr17	-	4217	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-239	0	-205	0	multi-exon	FALSE	canonical	3	570	junction_17	70.4455420481926	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338727	57328050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
Isoform_68998_34	chr17	-	3348	10	FSM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	12	2	12	-2	multi-exon	FALSE	canonical	3	34	junction_6	5.45916377623922	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTGATTTTTAATTGT	NA	False	NA	-9	True	AATAAA	-14	NA	57366851	57350712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57352664_57354185_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
Isoform_69000_8	chr17	-	1580	9	ISM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	11	3293	11	47	5prime_fragment	FALSE	canonical	3	34	junction_5	5.53257399408268	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCCTGAGAGTTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	57366852	57354003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
Isoform_69001_4	chr17	-	1222	8	NIC	ENSMUSG00000002668.9	novel	2521	24	NA	NA	1171	-7	combination_of_known_junctions	TRUE	canonical	3	18	junction_2	6.23027499638758	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGATAAATGTATCTGG	NA	False	NA	NA	False	AATAAA	-14	NA	57377626	57373061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_57373642_57373731_57373943_57374048_57374117_57374592_57374701_57374788_57374834_57377112_57377185_57377407_57377449_57377529
Isoform_69002_266	chr17	-	2089	17	FSM	ENSMUSG00000005823.10	ENSMUST00000005975.8	2064	17	31	-56	5	28	multi-exon	FALSE	canonical	3	88	junction_12	32.0784560686764	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGCGGAGCCCTGTG	NA	False	NA	-3	True	AAAAAG	-39	NA	57554658	57541915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
Isoform_69003_14	chr17	-	2004	17	NNC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	296	28	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	52.5403119042893	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGCGGAGCCCTGTG	NA	False	NA	-3	True	AAAAAG	-39	NA	57554367	57541915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554304
Isoform_69005_389	chr17	-	2108	17	FSM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	16	281	7	28	multi-exon	FALSE	canonical	3	119	junction_12	26.3293443708726	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGCGGAGCCCTGTG	NA	False	NA	-3	True	AAAAAG	-39	NA	57554656	57541915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
Isoform_69007_15	chr17	-	2017	17	NNC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	304	28	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	49.7622079870859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGCGGAGCCCTGTG	NA	False	NA	-3	True	AAAAAG	-39	NA	57554359	57541915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554304
Isoform_69014_98	chr17	-	3545	7	FSM	ENSMUSG00000024228.13	ENSMUST00000025065.12	4113	7	75	493	-29	0	multi-exon	FALSE	canonical	3	48	junction_4	5.17740818900302	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTTGTTTGTGTATTG	NA	False	NA	-13	True	AATAAA	-25	NA	59320292	59307105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
Isoform_69018_90	chr17	-	3260	9	FSM	ENSMUSG00000023965.14	ENSMUST00000024761.13	4925	9	-352	2017	-352	-531	multi-exon	FALSE	canonical	3	52	junction_1	4.68874983337776	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGTTCGCTTTTAC	NA	False	NA	-9	True	AATAAA	-22	NA	63807364	63366463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
Isoform_69028_185	chr17	-	4678	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	49	13	-2	2	multi-exon	FALSE	canonical	3	104	junction_6	24	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTCTAATATTTAATT	NA	False	NA	-16	True	AATAAA	-17	NA	64638862	64588012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
Isoform_69030_41	chr17	-	4741	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	-16	15	-16	0	multi-exon	FALSE	canonical	3	104	junction_6	24	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATTTCTAATATTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	64638927	64588014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
Isoform_69031_16	chr17	-	4778	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	-53	15	-53	0	multi-exon	FALSE	canonical	3	104	junction_6	24	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATTTCTAATATTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	64638964	64588014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
Isoform_69035_45	chr17	-	4531	9	FSM	ENSMUSG00000024083.17	ENSMUST00000172733.2	4488	9	-37	-6	14	6	multi-exon	FALSE	canonical	3	36	junction_5	42.6614580154031	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAATATTTAATTGTGT	NA	False	NA	-12	True	AATAAA	-21	NA	64638897	64588008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995_64620114_64638790
Isoform_69040_8	chr17	-	3291	5	FSM	ENSMUSG00000024083.17	ENSMUST00000232842.2	3559	5	17	251	-5	-251	multi-exon	FALSE	canonical	3	104	junction_1	27.4681633896407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGTTAGCATTGAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	64638865	64603052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
Isoform_69047_103	chr17	-	1976	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	-334	1727	-334	366	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	2629	False	NA	-6	True	AATAAA	-25	NA	65920884	65887048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
Isoform_69048_4276	chr17	-	1611	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	31	1727	31	366	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	4276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	2994	False	NA	-6	True	AATAAA	-25	NA	65920519	65887048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
Isoform_69064_32	chr17	-	3411	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	62	0	-50	0	multi-exon	FALSE	canonical	3	62	junction_1	10.1775897605147	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCCTTTCCTCATT	NA	False	NA	0	True	AATAAA	-15	NA	66079685	65958723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
Isoform_69065_168	chr17	-	3362	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	111	0	-1	0	multi-exon	TRUE	canonical	3	62	junction_1	10.1775897605147	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCCTTTCCTCATT	NA	False	NA	0	True	AATAAA	-15	NA	66079636	65958723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
Isoform_6908_190	chr10	+	3222	8	FSM	ENSMUSG00000020331.10	ENSMUST00000099513.8	3195	8	-23	-4	-23	4	multi-exon	FALSE	canonical	3	76	junction_3	3.18157963590287	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCAGCGTCTCATTACTT	NA	False	NA	28	True	AATAAA	-18	NA	79552444	79571946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79553054_79560221_79560646_79561980_79562143_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
Isoform_69082_17	chr17	-	3790	10	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-87	-13	combination_of_known_junctions	FALSE	canonical	1	23	junction_9	213.995384743125	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66191485	66155425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191216
Isoform_69085_526	chr17	-	3645	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	153	13	153	-13	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66191796	66155425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
Isoform_69086_204	chr17	-	3767	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	32	12	32	-12	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	66191917	66155424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
Isoform_69096_244	chr17	-	3650	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	484	-335	-360	-13	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66192309	66155425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
Isoform_6911_5	chr10	+	3061	7	NIC	ENSMUSG00000020331.10	novel	3195	8	NA	NA	-23	5	intron_retention	FALSE	canonical	1	1	junction_2	29.8142396999972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCGTCTCATTACTTT	NA	False	NA	29	True	AATAAA	-19	NA	79552444	79571947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_79553054_79560221_79560646_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
Isoform_69117_14	chr17	-	3928	6	NIC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	-32	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	105.899952785636	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCATGTTTTTTATTAA	8751	False	NA	-2	True	AATAAA	-16	NA	66258164	66230062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_66233154_66233251_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
Isoform_69121_382	chr17	-	3999	6	NNC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	-32	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	107.46422660588	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAGTCATGTTTTTTAT	8751	False	NA	-5	True	AATAAA	-13	NA	66258164	66230065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_66231104_66231127_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
Isoform_69123_10	chr17	-	3929	4	NIC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	-33	-1	intron_retention	FALSE	canonical	2	11	junction_2	115.274551494344	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATGTTTTTTATTAATT	8750	False	NA	0	True	AATAAA	-18	NA	66258165	66230060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_66233462_66236541_66236809_66255652_66255810_66258061
Isoform_69126_4	chr17	-	8900	12	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	4	518	intron_retention	FALSE	canonical	3	23	junction_5	19.3732370565579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGTGAAAGTGTGCTCC	NA	False	NA	NA	False	AATAAA	-24	NA	66384013	66274489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
Isoform_69130_3	chr17	-	7392	8	FSM	ENSMUSG00000034647.16	ENSMUST00000150766.2	1513	8	-53	-5826	-2	-5371	multi-exon	FALSE	canonical	3	23	junction_1	22.2481368171974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTATAGTTTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	66384070	66288213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
Isoform_69132_11	chr17	-	1012	5	FSM	ENSMUSG00000034647.16	ENSMUST00000129756.8	1403	5	45	346	0	-5	multi-exon	FALSE	canonical	2	19	junction_2	27.5170401751351	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAACATTTTTTAGGA	NA	False	NA	NA	False	AATAAA	-25	NA	66384039	66344138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
Isoform_69133_16	chr17	-	942	4	FSM	ENSMUSG00000034647.16	ENSMUST00000135136.8	943	4	-5	6	0	-6	multi-exon	FALSE	canonical	3	24	junction_1	25.5734237050888	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAAACATTTTTTAGG	NA	False	NA	NA	False	AATAAA	-24	NA	66384039	66344139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66344635_66356780_66356929_66359948_66360087_66383878
Isoform_69134_6	chr17	-	482	3	ISM	ENSMUSG00000034647.16	ENSMUST00000135136.8	943	4	-40	12647	-6	0	5prime_fragment	FALSE	canonical	3	75	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAAGAACTTATCTTCTG	NA	False	NA	NA	False	NA	NA	NA	66384074	66356780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_66356929_66359948_66360087_66383878
Isoform_69140_267	chr17	-	946	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	-49	800	-49	3	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTTATTCGGTTTGCT	5403	False	NA	-8	True	AATAAA	-18	NA	66408603	66386432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
Isoform_69141_1491	chr17	-	828	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	65	804	1	-1	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAAGCTTTATTCGGTT	5517	False	NA	-12	True	AATAAA	-14	NA	66408489	66386436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
Isoform_69148_7	chr17	-	2906	3	ISM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	39356	2	-9	-2	3prime_fragment	FALSE	canonical	3	153	junction_1	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACAGGGTCTTGGTGT	NA	False	NA	-21	True	AATAAA	-13	NA	66653549	66643984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_66645150_66649820_66651361_66653348
Isoform_69156_4	chr17	-	3553	6	ISM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	27616	-7	-11749	1	3prime_fragment	FALSE	canonical	3	146	junction_3	33.3550595862157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGGTGTCACCGTTTA	NA	False	NA	-12	True	AATAAA	-22	NA	66665289	66643975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016
Isoform_6916_3	chr10	+	1719	5	FSM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	1	235	1	-212	multi-exon	FALSE	canonical	2	5	junction_4	2.6809513236909	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	79613106	79618229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79613232_79614396_79614583_79615798_79616015_79616957_79617186_79617265
Isoform_69160_9	chr17	-	7372	15	NIC	ENSMUSG00000052105.18	novel	7274	15	NA	NA	-36	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	55.073235100998	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACAGGGTCTTGGTGT	NA	False	NA	-21	True	AATAAA	-13	NA	66756781	66643984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_69167_68	chr17	-	7213	14	FSM	ENSMUSG00000052105.18	ENSMUST00000086693.12	7221	14	4	4	4	0	multi-exon	FALSE	canonical	3	123	junction_12	28.2669020495577	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTCTTGGTGTCACC	NA	False	NA	-17	True	AATAAA	-17	NA	66756741	66643980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_69169_9	chr17	-	4906	12	NIC	ENSMUSG00000052105.18	novel	5441	16	NA	NA	-24	6	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	61.8816519089076	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAGTACAGTTTTCTG	NA	False	NA	1	True	AATAAA	-25	NA	66756769	66654954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_69170_65	chr17	-	4797	11	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-38	10974	-38	6	5prime_fragment	FALSE	canonical	3	123	junction_9	30.9258791305922	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAGTACAGTTTTCTG	NA	False	NA	1	True	AATAAA	-25	NA	66756783	66654954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_69173_9	chr17	-	3316	9	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-24	6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	65.5858216385218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAGTACAGTTTTCTG	NA	False	NA	1	True	AATAAA	-25	NA	66756769	66654954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_69174_3	chr17	-	1050	4	NNC	ENSMUSG00000052105.18	novel	2423	6	NA	NA	11908	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	102.924999662645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGAAATTGTAGTACAG	NA	False	NA	-6	True	AATAAA	-18	NA	66669751	66654961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_66655517_66661117_66661373_66665016_66665185_66669679
Isoform_69175_5	chr17	-	4261	8	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-32	28903	-32	455	5prime_fragment	FALSE	canonical	3	123	junction_6	18.2107839771171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATCATGCACAAAGTATT	NA	False	NA	NA	False	AATAAA	-19	NA	66756777	66672883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_69176_10	chr17	-	5008	7	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-21	29833	-21	-475	5prime_fragment	FALSE	canonical	3	123	junction_5	16.2044232644465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCACCCTTCCTAGA	NA	False	NA	NA	False	AATAAA	-30	NA	66756766	66673813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_69177_26	chr17	-	2010	4	FSM	ENSMUSG00000052105.18	ENSMUST00000127259.2	611	4	-1420	21	-39	-21	multi-exon	FALSE	canonical	3	123	junction_2	12.5521135891752	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-24	NA	66756784	66692761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_69181_37	chr17	-	2249	7	NIC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	101.840425284963	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAATTTGCCGTGTGT	NA	False	NA	-6	True	AATAAA	-20	NA	66826716	66801508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66811983_66812174_66813027_66813089_66826342
Isoform_69183_417	chr17	-	2059	6	FSM	ENSMUSG00000023460.14	ENSMUST00000070538.12	2069	6	8	2	8	-2	multi-exon	FALSE	canonical	3	199	junction_3	22.1720544830649	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAATTTGCCGTGTGT	NA	False	NA	-6	True	AATAAA	-20	NA	66826716	66801508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66813027_66813089_66826342
Isoform_69186_3	chr17	-	2011	2	ISM	ENSMUSG00000024105.4	ENSMUST00000024914.4	2544	4	34805	19	34805	-19	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCTGGGAGACCGACT	NA	False	NA	NA	False	NA	NA	NA	66866811	66861518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_66863260_66866541
Isoform_69187_3	chr17	-	5334	18	NIC	ENSMUSG00000024043.14	novel	5322	18	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	10.197699720269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAAGTGTTTCTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	68311130	68149707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171618_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
Isoform_69188_56	chr17	-	5347	18	FSM	ENSMUSG00000024043.14	ENSMUST00000024840.12	5322	18	-28	3	-28	-3	multi-exon	FALSE	canonical	3	21	junction_17	5.76530609120275	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTAAAAGTGTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	68311143	68149710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
Isoform_6919_11	chr10	+	2623	9	FSM	ENSMUSG00000035863.15	ENSMUST00000046945.13	2651	9	20	8	20	-8	multi-exon	FALSE	canonical	1	2	junction_7	77.7495980697007	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79629425	79656722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79652625_79652758_79654874
Isoform_69198_51	chr17	-	1454	3	FSM	ENSMUSG00000047407.18	ENSMUST00000172229.8	1446	3	-14	6	3	0	multi-exon	FALSE	canonical	3	41	junction_2	419.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71156799	71151205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71152268_71153166_71153394_71156634
Isoform_69199_16	chr17	-	1446	3	NIC	ENSMUSG00000047407.18	novel	1446	3	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	428.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAATGAAGAGCATTTT	NA	False	NA	77	True	AATAAA	-19	NA	71156799	71151206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_71152268_71153166_71153394_71156641
Isoform_69201_645	chr17	-	1627	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	-2	6	-2	0	multi-exon	FALSE	canonical	3	373	junction_2	253.5	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71158204	71151205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71152268_71153166_71153394_71157866
Isoform_69205_376	chr17	-	1373	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	15	0	15	0	multi-exon	FALSE	canonical	3	296	junction_2	292	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71160526	71151205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71152268_71153166_71153394_71160442
Isoform_69206_77	chr17	-	1396	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	296	junction_2	292	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71160549	71151205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71152268_71153166_71153394_71160442
Isoform_69207_14	chr17	-	1503	4	Fusion	ENSMUSG00000047407.18_ENSMUSG00000097154.3	novel	1714	3	NA	NA	6	0	multi-exon	TRUE	canonical	3	16	junction_2	405.421043141846	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71231985	71151205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_-_71152268_71153166_71153394_71186892_71187002_71231880
Isoform_69208_20	chr17	-	1463	3	NNC	ENSMUSG00000047407.18	novel	1446	3	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	435	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTTATTGCAATGAAG	NA	False	NA	69	True	AATAAA	-11	NA	71156812	71151214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_71152268_71153166_71153394_71156629
Isoform_6921_686	chr10	+	2510	8	FSM	ENSMUSG00000035863.15	ENSMUST00000105379.3	2519	8	1	8	1	-8	multi-exon	FALSE	canonical	3	161	junction_7	12.869835005206	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79629406	79656722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79654874
Isoform_69218_1535	chr17	-	940	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	374	829	14	64	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATGATGCTGACTC	3418	False	NA	-20	True	AATAAA	-14	NA	71297511	71280956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
Isoform_69220_75	chr17	-	1229	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	85	829	85	64	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATGATGCTGACTC	3129	False	NA	-20	True	AATAAA	-14	NA	71297800	71280956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
Isoform_69229_334	chr17	-	976	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	320	641	-47	-3	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTAGTTGTTTAGCG	2247	False	NA	-22	True	ATTAAA	-11	NA	71309229	71301291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
Isoform_69230_2283	chr17	-	921	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	375	641	8	-3	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	2283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTAGTTGTTTAGCG	2302	False	NA	-22	True	ATTAAA	-11	NA	71309174	71301291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
Isoform_69232_36	chr17	-	1258	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	38	641	38	-3	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTAGTTGTTTAGCG	1965	False	NA	-22	True	ATTAAA	-11	NA	71309511	71301291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
Isoform_69240_26	chr17	-	1146	4	ISM	ENSMUSG00000024053.12	ENSMUST00000233148.2	758	5	12210	-843	-41	0	3prime_fragment	FALSE	canonical	2	7	junction_2	4.49691252107735	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCTTTTCTGTATTT	NA	False	NA	-7	True	AATAAA	-15	NA	71563382	71559168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318
Isoform_6925_3	chr10	+	2435	5	FSM	ENSMUSG00000035852.12	ENSMUST00000169041.9	2497	5	24	38	24	0	multi-exon	FALSE	canonical	1	1	junction_1	3.89711431702997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79656846	79666286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79656928_79661529_79663269_79663711_79663846_79665226_79665266_79665844
Isoform_69250_108	chr17	-	7195	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-151	8	-151	-8	multi-exon	TRUE	canonical	3	108	junction_42	32.1184571856639	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAAATTAGTGGTTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	71782489	71651491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
Isoform_69252_58	chr17	-	7221	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-177	8	-177	-8	multi-exon	FALSE	canonical	3	108	junction_42	32.1184571856639	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAAATTAGTGGTTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	71782515	71651491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
Isoform_6926_13	chr10	+	2409	5	FSM	ENSMUSG00000035852.12	ENSMUST00000046833.5	2414	5	5	0	4	0	multi-exon	FALSE	canonical	1	2	junction_1	3.57071421427143	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658465	79666286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79658521_79661529_79663269_79663711_79663846_79665226_79665266_79665844
Isoform_69264_557	chr17	-	2151	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	48	2	-2	1	multi-exon	TRUE	canonical	3	248	junction_10	48.8427003246135	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCCCCTCCCATTTC	NA	False	NA	-13	True	AATAAA	-17	NA	71833804	71803096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
Isoform_69265_22	chr17	-	2208	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	-9	2	-9	1	multi-exon	FALSE	canonical	3	248	junction_10	48.8427003246135	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCCCCTCCCATTTC	NA	False	NA	-13	True	AATAAA	-17	NA	71833861	71803096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
Isoform_6927_4	chr10	+	2477	5	FSM	ENSMUSG00000035852.12	ENSMUST00000219305.2	2569	5	55	37	-14	0	multi-exon	FALSE	canonical	2	3	junction_1	3.26917420765551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658446	79666286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79658570_79661529_79663269_79663711_79663846_79665226_79665266_79665844
Isoform_69274_30	chr17	-	1274	3	FSM	ENSMUSG00000085492.8	ENSMUST00000143828.2	781	3	-492	-1	1	1	multi-exon	FALSE	canonical	3	25	junction_2	30	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTATGTATTTTTTAAG	NA	False	NA	-14	True	AATAAA	-18	NA	71905740	71895550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_71895980_71897482_71897518_71904930
Isoform_69276_55	chr17	-	1750	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-256	1669	-256	-3	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTCTGATTTAAACTT	NA	False	NA	NA	False	AATAAA	-16	NA	74602114	74507699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
Isoform_69277_88	chr17	-	1709	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-215	1669	-215	-3	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTCTGATTTAAACTT	NA	False	NA	NA	False	AATAAA	-16	NA	74602073	74507699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
Isoform_69279_3	chr17	-	3410	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-265	18	-265	-18	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGTGTTATATTGCACA	NA	False	NA	NA	False	ATTAAA	-17	NA	74602123	74506048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
Isoform_6928_11	chr10	+	2473	5	NIC	ENSMUSG00000035852.12	novel	2414	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.24264068711928	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658455	79666286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_79658575_79661529_79663269_79663711_79663846_79665226_79665266_79665844
Isoform_69283_16	chr17	-	1509	10	NIC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	80.0302411977675	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTCTGATTTAAACTT	NA	False	NA	NA	False	AATAAA	-16	NA	74602516	74507699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
Isoform_69284_4	chr17	-	1650	8	ISM	ENSMUSG00000058704.10	ENSMUST00000232987.2	1041	9	399	-365	-234	-4	3prime_fragment	FALSE	canonical	2	11	junction_2	97.4017558405203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	74602092	74507700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_74508321_74509255_74509361_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
Isoform_69286_82	chr17	-	712	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	-16	-2	-16	2	multi-exon	FALSE	canonical	3	2414	junction_1	149.934059580278	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTTGTTGTATATG	NA	False	NA	-16	True	AATAAA	-18	NA	74623214	74606474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
Isoform_69289_21	chr17	-	791	5	FSM	ENSMUSG00000024067.15	ENSMUST00000112571.5	622	5	7	-176	7	2	multi-exon	FALSE	canonical	3	140	junction_4	1057.76707620345	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTTGTTGTATATG	NA	False	NA	-16	True	AATAAA	-18	NA	74623396	74606474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623214
Isoform_6929_2360	chr10	+	2834	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	205	71	-1	2	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	2360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1588	False	NA	33	True	ATTAAA	-17	NA	79690465	79700195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_69291_1256	chr17	-	686	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	42	6	-13	2	multi-exon	FALSE	canonical	3	1923	junction_4	306.562391692132	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTTGTTGTATATG	NA	False	NA	-16	True	AATAAA	-18	NA	74623416	74606474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
Isoform_6930_1424	chr10	+	2908	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	205	-3	-1	3	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1588	False	NA	26	True	AATAAA	-16	NA	79690465	79700269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_69302_427	chr17	-	2727	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	84	6	0	3	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCTCTGGGAGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	75858857	75844086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
Isoform_69303_90	chr17	-	2752	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	58	7	-15	2	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGCTCTGGGAGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	75858883	75844087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
Isoform_69305_6	chr17	-	3325	7	NIC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	156	junction_3	26.5560204515327	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGCTCTGGGAGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	75858863	75844087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_75845857_75845941_75846110_75846395_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
Isoform_69308_5	chr17	-	1600	8	NIC	ENSMUSG00000056121.17	novel	1939	8	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	98.8728311251067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGAGTTTTTGTTCG	NA	False	NA	-1	True	AATAAA	-18	NA	78725532	78685308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_78685859_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
Isoform_69309_7	chr17	-	1996	9	FSM	ENSMUSG00000056121.17	ENSMUST00000112487.3	2041	9	43	2	-13	-1	multi-exon	FALSE	canonical	2	4	junction_4	124.244718197596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCGGAGTCTTGAGTTT	NA	False	NA	-8	True	AATAAA	-11	NA	78725538	78685315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78694419_78694501_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
Isoform_6931_75	chr10	+	2884	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	155	71	-23	2	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1538	False	NA	33	True	ATTAAA	-17	NA	79690415	79700195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_69311_291	chr17	-	1906	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	33	0	-2	0	multi-exon	FALSE	canonical	3	258	junction_3	15.727267365169	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	78725527	78685313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
Isoform_69312_11	chr17	-	1798	7	NIC	ENSMUSG00000056121.17	novel	1939	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	104.450945424156	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	78725528	78685313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78725261
Isoform_69313_8	chr17	-	1152	6	ISM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	27	6692	-8	-6691	5prime_fragment	FALSE	canonical	3	258	junction_1	18.0731845561318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCGAGTTGAGTGTTGTT	NA	False	NA	NA	False	AGTAAA	-21	NA	78725533	78692005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
Isoform_69314_8	chr17	-	1731	6	ISM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	22	6118	-13	-6117	5prime_fragment	FALSE	canonical	3	258	junction_1	18.0731845561318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTATAGTAAATAAATTCT	NA	False	NA	NA	False	AATAAA	-18	NA	78725538	78691431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
Isoform_69316_5	chr17	-	4015	5	ISM	ENSMUSG00000056121.17	ENSMUST00000234530.2	2001	10	-15	19633	-2	1965	5prime_fragment	FALSE	canonical	3	281	junction_2	10.7558123821495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGTCTTGAATCTT	NA	False	NA	NA	False	AATAAA	-14	NA	78725527	78704946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
Isoform_69318_19	chr17	-	5528	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	557	2544	557	2139	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGGCTATTCAAATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	79044068	78959885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
Isoform_69319_4	chr17	-	8061	19	NNC	ENSMUSG00000024077.16	novel	8629	18	NA	NA	539	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.3363197596069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGTTCATGTGCTCC	NA	False	NA	-17	True	AATAAA	-7	NA	79044086	78957348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_78959614_78959635_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
Isoform_69320_25	chr17	-	5471	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	617	2541	617	2142	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCTATTCAAATGTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	79044008	78959882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
Isoform_69322_116	chr17	-	6423	36	FSM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	-41	6	-1	1	multi-exon	TRUE	canonical	3	55	junction_23	13.6878912673552	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAGCATTCATACAGTA	NA	False	NA	NA	False	AATAAA	-18	NA	79142794	79060332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
Isoform_69325_49	chr17	-	2342	16	FSM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	26	1945	1	845	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTGCAATAGGGTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	79189976	79161937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
Isoform_69327_14	chr17	-	6320	16	FSM	ENSMUSG00000091549.2_ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	51	-2058	26	286	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTTGGTCAATGCT	NA	False	NA	0	True	ATTAAA	-16	NA	79189951	79157934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
Isoform_69328_13	chr17	-	4294	16	FSM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	27	-8	2	8	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCTCTCTTAAGTTGC	NA	False	NA	NA	False	AATAAA	-13	NA	79189975	79159984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
Isoform_69331_7	chr17	-	4788	3	ISM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	-46	-10	-46	10	intron_retention	FALSE	canonical	3	178	junction_2	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	-6	True	ATTAAA	-26	NA	79202575	79192315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_79192646_79196359_79196517_79198274
Isoform_69332_60	chr17	-	1141	4	ISM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	0	-11	0	11	intron_retention	FALSE	canonical	3	141	junction_3	32.273139846559	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTGTCAGTGTGTTG	NA	False	NA	-5	True	ATTAAA	-27	NA	79202529	79192314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971
Isoform_69333_13	chr17	-	821	5	FSM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	-46	-11	-46	11	multi-exon	FALSE	canonical	3	72	junction_4	54.3570372628973	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTGTCAGTGTGTTG	NA	False	NA	-5	True	ATTAAA	-27	NA	79202575	79192314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202464
Isoform_69334_33	chr17	-	775	5	FSM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	0	-11	0	11	multi-exon	FALSE	canonical	3	72	junction_4	54.3570372628973	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTGTCAGTGTGTTG	NA	False	NA	-5	True	ATTAAA	-27	NA	79202529	79192314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202464
Isoform_69335_33	chr17	-	2975	4	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	1	11	intron_retention	FALSE	canonical	3	19	junction_3	86.5678924313166	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTGTCAGTGTGTTG	NA	False	NA	-5	True	ATTAAA	-27	NA	79202528	79192314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79200136
Isoform_69336_6	chr17	-	3073	4	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-99	9	intron_retention	FALSE	canonical	3	19	junction_3	86.5678924313166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTGCTGTCAGTGTGT	NA	False	NA	-7	True	ATTAAA	-25	NA	79202628	79192316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79200136
Isoform_69338_4	chr17	-	889	2	NIC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-1	10	intron_retention	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	-6	True	ATTAAA	-26	NA	79202530	79192315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_79192646_79201971
Isoform_69362_949	chr17	-	3309	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	15	746	-10	93	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTACTGTCATTTAT	NA	False	NA	-44	True	AATAAA	-8	NA	79244480	79227180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
Isoform_69365_146	chr17	-	4057	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	15	-2	-10	2	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGTCTATTAGCATTT	NA	False	NA	-1	True	ATTAAA	-42	NA	79244480	79226432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
Isoform_69377_7	chr17	-	4753	19	FSM	ENSMUSG00000024070.16	ENSMUST00000168887.8	5884	19	-2	1133	-2	11	multi-exon	FALSE	canonical	2	15	junction_8	47.0699505726698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACAGGTTTTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	79328247	79257966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270006_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
Isoform_69378_5	chr17	-	5889	19	FSM	ENSMUSG00000024070.16	ENSMUST00000168887.8	5884	19	-10	5	-10	-5	multi-exon	FALSE	canonical	2	15	junction_8	47.0699505726698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACTTTCCTATGTGAAA	NA	False	NA	-4	True	AATAAA	-17	NA	79328255	79256838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270006_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
Isoform_69381_126	chr17	-	5896	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	-15	-1138	-15	-6	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACTTTCCTATGTGAA	NA	False	NA	-5	True	AATAAA	-16	NA	79328260	79256839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
Isoform_69385_122	chr17	-	3630	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-15	-541	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTGTTTAATATATTTA	NA	False	NA	0	True	NA	NA	NA	79328260	79277588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
Isoform_69390_11	chr17	-	2274	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-8	-1	-8	1	multi-exon	FALSE	canonical	3	71	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAACGTGTTCATTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	79662528	79641154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79643146_79662245
Isoform_69391_30	chr17	-	2001	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-8	272	-8	-272	multi-exon	FALSE	canonical	3	71	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAGTCTACATTTTAT	NA	False	NA	-4	True	AATATA	-25	NA	79662528	79641427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79643146_79662245
Isoform_69400_10	chr17	-	2585	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-590	270	-590	-270	multi-exon	FALSE	canonical	3	71	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGTCTACATTTTATAC	NA	False	NA	-2	True	AATATA	-27	NA	79663110	79641425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_79643146_79662245
Isoform_69404_29	chr17	-	1849	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10320	-248	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACATCAAGTGTTATTTG	NA	False	NA	20	True	NA	NA	NA	79650116	79641403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_79643146_79650009
Isoform_69405_5	chr17	-	1872	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10296	-249	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACATCAAGTGTTATTT	NA	False	NA	19	True	NA	NA	NA	79650140	79641404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_79643146_79650009
Isoform_69406_5	chr17	-	2100	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10317	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAACGTGTTCATTTA	NA	False	NA	NA	False	AATAAA	-12	NA	79650119	79641155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_79643146_79650009
Isoform_69407_3	chr17	-	1851	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	-562	-277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTGCAAAGTCTACAT	NA	False	NA	-9	True	AATATA	-20	NA	79663082	79641432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_79643146_79662944
Isoform_69408_3	chr17	-	2285	4	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10246	-278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATTGCAAAGTCTACA	NA	False	NA	-10	True	AATATA	-19	NA	79650190	79641433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_79643146_79647843_79648099_79648962_79649100_79650009
Isoform_6941_1170	chr10	+	2756	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	3	410	-1	2	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1588	False	NA	33	True	ATTAAA	-17	NA	79690465	79700195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_69412_638	chr17	-	2870	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	70	678	-2	-5	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACGAAAGTTGTGATTC	3821	False	NA	NA	False	ATTAAA	-16	NA	80203482	80156496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_69413_98	chr17	-	3570	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	70	-22	-2	22	multi-exon	TRUE	canonical	3	301	junction_5	41.6619997386374	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACACAGTTTAAAACTCC	3821	False	NA	20	True	AATAAA	-40	NA	80203482	80155796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_69417_21	chr17	-	2625	12	FSM	ENSMUSG00000059811.14	ENSMUST00000112437.8	3371	12	71	675	-1	-4	multi-exon	FALSE	canonical	3	19	junction_11	103.456941975757	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3822	False	NA	NA	False	ATTAAA	-17	NA	80203481	80156495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80203337
Isoform_6942_747	chr10	+	2830	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	3	336	-1	3	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1588	False	NA	26	True	AATAAA	-16	NA	79690465	79700269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_69420_20	chr17	-	2799	12	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	3	61	junction_2	96.5253360308462	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAAAGTTGTGATTCTT	3822	False	NA	NA	False	ATTAAA	-18	NA	80203481	80156494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80157708_80159953_80160386_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_69421_30	chr17	-	3388	13	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	105.266988599888	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAAAGTTGTGATTCTT	3820	False	NA	NA	False	ATTAAA	-18	NA	80203483	80156494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_69423_16	chr17	-	5116	12	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	301	junction_4	43.1156430740161	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3822	False	NA	NA	False	ATTAAA	-17	NA	80203481	80156495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_69428_41	chr17	-	2770	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	-112	351	-5	-1	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATGTGTTCATCTTCAT	3458	False	NA	NA	False	TATAAA	-14	NA	80369768	80337266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_69429_401	chr17	-	2137	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTTTGTTGTTAACTT	3587	False	NA	-5	True	AATAAA	-15	NA	80369639	80337770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_69433_274	chr17	-	2983	13	NNC	ENSMUSG00000024095.16	novel	3009	13	NA	NA	0	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTTTCTTTCTCTTTT	3570	False	NA	-30	True	NA	NA	NA	80369656	80336941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_69435_64	chr17	-	2247	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	-93	855	14	-1	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTTTGTTGTTAACTT	3477	False	NA	-5	True	AATAAA	-15	NA	80369749	80337770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_69436_278	chr17	-	2637	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGTGTTCATCTTCA	3590	False	NA	NA	False	TATAAA	-13	NA	80369636	80337267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_69437_37	chr17	-	3075	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	14	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGTTTCTTTCTCTTT	3477	False	NA	-31	True	NA	NA	NA	80369749	80336942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_6944_247	chr10	+	2857	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	-24	336	0	3	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1561	False	NA	26	True	AATAAA	-16	NA	79690438	79700269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_69469_338	chr17	-	2279	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	4	5	2	-5	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCTGATATTCAGTC	NA	False	NA	-16	True	AATAAA	-18	NA	80514730	80507513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_69471_541	chr17	-	1056	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	2	1230	0	0	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_69476_87	chr17	-	1928	7	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	759	junction_3	536.547735268934	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514730	80508738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80512868_80513276_80513458_80514603
Isoform_69485_503	chr17	-	2270	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	2	-1232	2	-5	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCTGATATTCAGTC	NA	False	NA	-16	True	AATAAA	-18	NA	80514730	80507513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_69486_789	chr17	-	1047	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	0	-7	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_69492_155	chr17	-	1918	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	4	-1	2	-1	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
Isoform_69493_48	chr17	-	3144	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	4	-1227	2	-5	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCTGATATTCAGTC	NA	False	NA	-16	True	AATAAA	-18	NA	80514730	80507513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
Isoform_69495_168	chr17	-	1022	8	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514732	80508739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_69496_97	chr17	-	2246	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCTGATATTCAGTC	NA	False	NA	-16	True	AATAAA	-18	NA	80514730	80507513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_69505_144	chr17	-	3305	6	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	1956	junction_1	145.974792344432	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514730	80508738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
Isoform_69506_36	chr17	-	4526	6	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-9	intron_retention	FALSE	canonical	3	1956	junction_1	145.974792344432	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514730	80507517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
Isoform_69513_52	chr17	-	1011	7	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	782.029553292088	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_69524_4	chr17	-	2149	10	ISM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	35561	-7	13260	5	3prime_fragment	FALSE	canonical	3	80	junction_8	8.63384096891663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTAGACGTGATTTG	2703	False	NA	0	True	AATAAA	-20	NA	80562011	80545732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693
Isoform_69527_5	chr17	-	4998	24	NIC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	68	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_23	19.0429819272227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTGTGGAGTAGACG	946	False	NA	-7	True	AATAAA	-13	NA	80597504	80545739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597155
Isoform_69528_126	chr17	-	4747	24	FSM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	-8	-2	-8	0	multi-exon	FALSE	canonical	3	55	junction_22	13.7365159867987	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGGAGTAGACGTG	870	False	NA	-5	True	AATAAA	-15	NA	80597580	80545737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
Isoform_69530_7	chr17	-	4581	23	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	25.7536004062402	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTGTGGAGTAGACG	875	False	NA	-7	True	AATAAA	-13	NA	80597575	80545739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_80546360_80549380_80549577_80553098_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80588624_80588858_80597484
Isoform_69533_75	chr17	-	5543	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-457	3350	27	-3350	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTGATTCTTATTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	80787855	80704529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
Isoform_69534_65	chr17	-	5566	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-482	3352	2	-3352	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGGTTGATTCTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	80787880	80704531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
Isoform_69536_18	chr17	-	8662	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-490	264	-6	-264	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTATTTTGCAAGC	NA	False	NA	2	True	AATAAA	-24	NA	80787888	80701443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
Isoform_69537_4	chr17	-	8894	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-457	-1	27	1	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGATTCAGTCCATTTA	NA	False	NA	NA	False	AATAAA	-14	NA	80787855	80701178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
Isoform_69544_101	chr17	-	4266	34	FSM	ENSMUSG00000024242.16	ENSMUST00000025089.9	4220	34	-43	-3	-43	-2	multi-exon	FALSE	canonical	3	139	junction_19	37.8671982269756	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035565	80887942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
Isoform_69546_17	chr17	-	4326	34	FSM	ENSMUSG00000024242.16	ENSMUST00000025089.9	4220	34	-103	-3	-103	-2	multi-exon	FALSE	canonical	3	139	junction_19	37.8671982269756	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035625	80887942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
Isoform_69548_14	chr17	-	4057	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-76	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_34	53.8948819879798	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035598	80887942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
Isoform_69549_9	chr17	-	4096	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	33	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_31	57.3580363675178	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035489	80887945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222
Isoform_69553_98	chr17	-	4234	33	FSM	ENSMUSG00000024242.16	ENSMUST00000234133.2	4088	33	-146	0	-77	0	multi-exon	FALSE	canonical	3	111	junction_19	35.3232837516559	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035599	80887945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
Isoform_69554_10	chr17	-	4262	33	FSM	ENSMUSG00000024242.16	ENSMUST00000234133.2	4088	33	-171	-3	-102	-2	multi-exon	FALSE	canonical	3	111	junction_19	35.3232837516559	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035624	80887942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
Isoform_69555_16	chr17	-	3985	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-67	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_33	52.9802361056886	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035589	80887942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
Isoform_69559_6	chr17	-	4132	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-31	-2	combination_of_known_splicesites	TRUE	canonical	3	18	junction_16	56.7851969596831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035485	80887942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
Isoform_69560_6	chr17	-	4239	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-73	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_16	56.7851969596831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035595	80887945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
Isoform_69562_9	chr17	-	4162	32	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_16	55.8979298721861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035581	80887945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
Isoform_69568_7	chr17	-	2226	11	FSM	ENSMUSG00000024246.10	ENSMUST00000234801.2	2239	11	16	-3	1	3	multi-exon	FALSE	canonical	2	2	junction_1	48.9983673197383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTTATAGACTCTTG	8165	False	NA	NA	False	ATTAAA	-25	NA	81372495	81333757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_81334400_81338052_81338444_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
Isoform_69569_190	chr17	-	1830	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	-8	11	7	-11	multi-exon	FALSE	canonical	3	99	junction_3	16.3940669785982	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTTAACCTATAATTTG	8156	False	NA	NA	False	ATTAAA	-11	NA	81372504	81333771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
Isoform_69570_3	chr17	-	3925	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	-8	-2084	7	2084	multi-exon	FALSE	canonical	3	99	junction_3	16.3940669785982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACTCTCAGTTGCCTT	8156	False	NA	NA	False	NA	NA	NA	81372504	81331676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
Isoform_69571_11	chr17	-	1986	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.3007399519289	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGCTTATAGACTCTT	8137	False	NA	NA	False	ATTAAA	-24	NA	81372523	81333758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81371345_81371470_81372363
Isoform_69572_13	chr17	-	1948	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	45.4774669479293	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGCTTATAGACTCTT	8165	False	NA	NA	False	ATTAAA	-24	NA	81372495	81333758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81347860_81347975_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
Isoform_69573_3	chr17	-	2091	12	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	54.000765222616	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGCTTATAGACTCTT	8146	False	NA	NA	False	ATTAAA	-24	NA	81372514	81333758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81347860_81347975_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81371345_81371470_81372363
Isoform_69576_786	chr17	-	1065	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	0	11	0	5	multi-exon	TRUE	canonical	0	0	junction_1	644	786	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTTAGTTTGTTTG	9947	False	NA	-34	True	AATAAA	-12	NA	83821759	83809357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_83810167_83811528_83811658_83821632
Isoform_69582_4	chr17	-	1427	11	NNC	ENSMUSG00000000673.10	novel	1381	10	NA	NA	-391	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.89736659610103	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTACTTGCGAGTTTTA	6604	False	NA	NA	False	AATAAA	-14	NA	84154632	84138783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_84139151_84139255_84139339_84139755_84139825_84142207_84142354_84142619_84142664_84142903_84142994_84145900_84146008_84146229_84146314_84150624_84150704_84154065_84154252_84154460
Isoform_69583_3	chr17	-	1264	10	NNC	ENSMUSG00000000673.10	novel	1381	10	NA	NA	-375	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.76383420737639	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTACTTGCGAGTTTT	6620	False	NA	NA	False	AATAAA	-13	NA	84154616	84138784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_84139151_84139255_84139339_84139755_84139825_84142619_84142664_84142903_84142994_84145900_84146008_84146229_84146314_84150624_84150704_84154065_84154252_84154460
Isoform_69584_256	chr17	-	3527	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	3	0	3	0	multi-exon	FALSE	canonical	3	151	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCTTTGAGTAAT	NA	False	NA	NA	False	AATAAA	-10	NA	84495372	84491358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_84494585_84495071
Isoform_69585_42	chr17	-	3580	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	-50	0	-50	0	multi-exon	FALSE	canonical	3	151	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCTTTGAGTAAT	NA	False	NA	NA	False	AATAAA	-10	NA	84495425	84491358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_84494585_84495071
Isoform_69586_10	chr17	-	3632	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	-102	0	-102	0	multi-exon	FALSE	canonical	3	151	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCTTTGAGTAAT	NA	False	NA	NA	False	AATAAA	-10	NA	84495477	84491358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_84494585_84495071
Isoform_69591_8	chr17	-	7930	38	FSM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-111	-35	-22	35	multi-exon	TRUE	canonical	2	39	junction_31	15.529655412283	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATGTTTCAGAGCAGGC	NA	False	NA	-4	True	AATAAA	-32	NA	84773655	84497468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
Isoform_69593_15	chr17	-	6429	38	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	9	73	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_37	16.4770908096234	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTATGTTTGATTCTGG	NA	False	NA	-44	True	TATAAA	-20	NA	84773624	84498891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
Isoform_69594_8	chr17	-	2679	13	NNC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	13683	71	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	23.3789732214417	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGTATGTTTGATTCT	NA	False	NA	-46	True	TATAAA	-18	NA	84662525	84498893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84662339
Isoform_69595_10	chr17	-	2588	13	NNC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	13772	69	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	23.3789732214417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGGGTATGTTTGATT	NA	False	NA	-48	True	TATAAA	-16	NA	84662436	84498895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84662339
Isoform_69628_822	chr17	-	4389	38	FSM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	0	4	0	-4	multi-exon	FALSE	canonical	3	476	junction_25	55.1799102769645	822	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097986	85012678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
Isoform_69643_9	chr17	-	2322	15	NIC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	52.4877050715067	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397672	85371956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85395871_85397533
Isoform_69645_347	chr17	-	2766	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-31	-1	-14	0	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397683	85371956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
Isoform_69646_19	chr17	-	3819	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-32	-1053	-15	-7	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAATTCCAATTTTCTT	NA	False	NA	-25	True	TATAAA	-31	NA	85397684	85370904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
Isoform_69647_32	chr17	-	4941	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	13	-2220	10	1160	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTCTGAAAGTCTTT	NA	False	NA	0	True	ATTAAA	-14	NA	85397639	85369737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
Isoform_69649_14	chr17	-	2639	15	NNC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	51.2963080980473	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397695	85371956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397672
Isoform_69651_55	chr17	-	2211	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-15	1059	5	0	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397664	85371956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
Isoform_69652_6	chr17	-	3263	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-16	8	4	-8	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAAATTCCAATTTTCT	NA	False	NA	-26	True	TATAAA	-30	NA	85397665	85370905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
Isoform_69659_162	chr17	-	3500	21	FSM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	27	3	27	-3	multi-exon	FALSE	canonical	3	77	junction_9	11.0027269347194	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGGTGTGCTGTTCA	NA	False	NA	-4	True	AATAAA	-12	NA	86452576	86292095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
Isoform_69661_13	chr17	-	3574	22	NNC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	28.8156231245209	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTGTGCTGTTCATT	NA	False	NA	-2	True	AATAAA	-14	NA	86452606	86292093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_86292912_86295752_86295938_86304933_86304976_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
Isoform_69665_165	chr17	-	948	6	FSM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	38	2	38	-2	multi-exon	FALSE	canonical	3	301	junction_5	28.3760462362183	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGGCTTCAGATGCTG	NA	False	NA	-14	True	AATAAA	-13	NA	87332796	87304685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
Isoform_69668_16	chr17	-	1766	4	NNC	ENSMUSG00000024150.13	novel	2038	4	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.196769288218	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573362	87562093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_87563486_87564574_87564735_87565355_87565518_87573310
Isoform_69670_9	chr17	-	1964	5	FSM	ENSMUSG00000024150.13	ENSMUST00000129616.8	813	5	-21	-1130	3	0	multi-exon	FALSE	canonical	2	8	junction_4	139.054620563288	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573329	87562085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177_87566310_87573219
Isoform_69672_35	chr17	-	1907	5	FSM	ENSMUSG00000024150.13	ENSMUST00000151155.8	603	5	0	-1304	0	-8	multi-exon	FALSE	canonical	3	42	junction_4	129.331695651143	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573323	87562093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177_87566310_87573262
Isoform_69673_16	chr17	-	2040	5	FSM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	-31	8	0	-8	multi-exon	FALSE	canonical	3	15	junction_4	147.031246679065	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573363	87562093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87571568_87571794_87573262
Isoform_69674_9	chr17	-	1796	4	NIC	ENSMUSG00000024150.13	novel	813	5	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	142.964642093382	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573301	87562093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_87563486_87564574_87564735_87565355_87565518_87573219
Isoform_69675_136	chr17	-	1775	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	40	223	0	-8	multi-exon	FALSE	canonical	3	165	junction_3	69.8108555710038	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573323	87562093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
Isoform_69676_129	chr17	-	1798	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	17	223	-14	-8	multi-exon	FALSE	canonical	3	165	junction_3	69.8108555710038	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573346	87562093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
Isoform_69684_5085	chr17	-	1130	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	74	1	-5	-1	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGCTCTGAATCTGAG	NA	False	NA	-6	True	AATAAA	-20	NA	87754289	87740840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
Isoform_69685_207	chr17	-	1185	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	19	1	19	-1	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGCTCTGAATCTGAG	NA	False	NA	-6	True	AATAAA	-20	NA	87754344	87740840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
Isoform_69694_12	chr17	-	2029	2	FSM	ENSMUSG00000050138.9	ENSMUST00000055221.9	1972	2	-89	32	-89	-32	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACGAAACCAAAAAAACA	7883	False	NA	NA	False	NA	NA	NA	88105511	88053260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_88054270_88104491
Isoform_69695_10	chr17	-	1093	2	NNC	ENSMUSG00000050138.9	novel	1972	2	NA	NA	50978	-32	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACGAAACCAAAAAAACA	3768	False	NA	NA	False	NA	NA	NA	88054444	88053260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_88054270_88054360
Isoform_69707_4	chr17	-	4555	23	FSM	ENSMUSG00000005371.16	ENSMUST00000130379.9	3753	23	-804	2	-541	-2	multi-exon	FALSE	canonical	3	18	junction_20	22.0632542949277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCTGAATTTACCA	NA	False	NA	-2	True	AATAAA	-15	NA	88373260	88298288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372436
Isoform_69709_18	chr17	-	4793	23	FSM	ENSMUSG00000005371.16	ENSMUST00000005504.15	4019	23	-777	3	-777	-3	multi-exon	FALSE	canonical	3	35	junction_20	20.0647711505094	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGTCTGAATTTACC	NA	False	NA	-3	True	AATAAA	-14	NA	88373496	88298289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436
Isoform_69712_28	chr17	-	2601	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	18	-4	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCCTTTATAGTGAGT	NA	False	NA	NA	False	TATAAA	-43	NA	95057429	95034516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
Isoform_69717_15	chr17	-	3797	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-19	1155	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAACTTATATAATCTG	NA	False	NA	-10	True	NA	NA	NA	95057466	95033357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
Isoform_69720_10	chr17	-	7070	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-21	-69	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGAATTAAAGACTTG	NA	False	NA	-1	True	AATAAA	-15	NA	95057468	95030086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
Isoform_69724_11	chr17	-	2578	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATAGTGAGTCTCT	NA	False	NA	NA	False	AATATA	-16	NA	95057453	95034512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
Isoform_69725_4	chr17	-	3725	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-21	1132	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGCTCATTTCCCAAC	NA	False	NA	-33	True	NA	NA	NA	95057468	95033380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
Isoform_69727_19	chr17	-	2571	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	-15	4	-15	-4	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCCTTTATAGTGAGT	NA	False	NA	NA	False	TATAAA	-43	NA	95057462	95034516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
Isoform_69728_5	chr17	-	6968	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	18	-4426	18	-69	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGAATTAAAGACTTG	NA	False	NA	-1	True	AATAAA	-15	NA	95057429	95030086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
Isoform_69729_5	chr17	-	3665	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	24	-1129	24	1129	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTTGGCTCATTTCCC	NA	False	NA	-36	True	NA	NA	NA	95057423	95033383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
Isoform_69731_6	chr17	-	2396	2	ISM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	-21	19592	-21	22	5prime_fragment	FALSE	canonical	3	86	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAATCTACCTCATCTG	NA	False	NA	NA	False	GATAAA	-26	NA	95057468	95054104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_95055846_95056813
Isoform_69732_3	chr17	-	2338	2	FSM	ENSMUSG00000055660.10	ENSMUST00000234593.2	2224	2	-94	-20	-16	20	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGAATCTACCTCATC	NA	False	NA	NA	False	TATAAA	-44	NA	95057463	95054106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_95055846_95056864
Isoform_69733_15	chr17	-	4374	3	ISM	ENSMUSG00000066057.8	ENSMUST00000234189.2	1909	5	1	54794	1	18320	5prime_fragment	FALSE	canonical	3	15	junction_2	22	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCTATCATCTTTCT	NA	False	NA	0	True	AATAAA	-22	NA	95142225	95122165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_95126373_95127763_95127825_95142119
Isoform_69734_48	chr17	-	4492	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	10	18320	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCTATCATCTTTCT	NA	False	NA	0	True	AATAAA	-22	NA	95142216	95122165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
Isoform_69735_12	chr17	-	3048	2	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10140	-22719	at_least_one_novel_splicesite	FALSE	canonical	3	399	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATTATAAGTA	2328	False	NA	NA	False	TTTAAA	-40	NA	6744561	6731519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6734422_6744415
Isoform_69736_156	chr17	-	2924	2	Intergenic	novelGene_4921	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	307	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAAAGGTTGTCTGTTT	274	False	NA	-25	True	NA	NA	NA	35219329	35215708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35218446_35219142
Isoform_69738_3	chr17	-	2938	2	Intergenic	novelGene_4920	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAAAGGTTGTCTGTTT	428	False	NA	-25	True	NA	NA	NA	35219175	35215708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35218446_35218974
Isoform_69739_3	chr17	-	3100	2	Intergenic	novelGene_4919	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	274	False	NA	-17	True	NA	NA	NA	35219329	35215700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35218446_35218974
Isoform_69740_12	chr17	-	3195	2	Intergenic	novelGene_4922	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAAAGGTTGTCTGTTT	NA	False	NA	-25	True	NA	NA	NA	35219808	35215708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35218446_35219350
Isoform_69743_111	chr17	-	6057	4	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22978	3349	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_3	5.43650214343336	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGAGTTTGCTTACT	NA	False	NA	-9	True	NA	NA	NA	22958896	22929413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22958635
Isoform_69745_27	chr17	-	2154	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	26.5736711803243	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTGGCTCTGTGTGCT	4822	False	NA	-2	True	ATTAAA	-19	NA	23805207	23794819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_23796137_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
Isoform_69749_6	chr17	-	1256	2	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-841	-3822	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAATAATAATT	NA	False	NA	NA	False	NA	NA	NA	30846720	30845236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_30846170_30846397
Isoform_69752_7	chr17	-	2314	3	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	7510	False	NA	NA	False	NA	NA	NA	27548998	27543051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_27544999_27545783_27545977_27548824
Isoform_69753_12	chr17	-	713	4	Antisense	novelGene_ENSMUSG00000033855.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	14.6590889515307	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCATTGACTTAGGGCC	NA	False	NA	NA	False	NA	NA	NA	88932925	88923828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_88924018_88928723_88928829_88930105_88930383_88932783
Isoform_69754_24	chr17	-	1916	2	Antisense	novelGene_ENSMUSG00000034265.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGGTGTTGTGTCTTT	NA	False	NA	1	True	NA	NA	NA	5577542	5572998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_5574721_5577348
Isoform_69756_3	chr17	-	539	2	Antisense	novelGene_ENSMUSG00000033855.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTCCGACATTTGTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	88932927	88929987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_88930383_88932783
Isoform_69757_21	chr17	-	3034	8	NNC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	2	intron_retention	FALSE	canonical	3	5	junction_1	69.953920693612	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGGGCCTCTCAAATGG	NA	False	NA	-2	True	AATAAA	-33	NA	47813212	47799204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_47801447_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_69758_14	chr17	-	1876	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	192.284788789961	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063121	47046681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_47047873_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
Isoform_69761_3	chr17	-	2516	4	NNC	ENSMUSG00000097624.3	novel	1218	5	NA	NA	2	-2942	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	16.779617264871	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAGGCATTGAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	15461043	15454788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_15456884_15457287_15457536_15460531_15460624_15460962
Isoform_69763_8	chr17	-	3939	4	Fusion	ENSMUSG00000046173.4_ENSMUSG00000117341.2	novel	588	4	NA	NA	6	-3	multi-exon	FALSE	canonical	1	2	junction_1	4.02768199119819	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTTTGTGGTTCA	NA	False	NA	NA	False	AATAAA	-37	NA	9945276	9885426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_-_9888971_9924446_9924688_9941118_9941218_9945221
Isoform_69766_7	chr17	-	1345	2	Intergenic	novelGene_4702	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCATTCTGTTCTGTTCGT	NA	False	NA	NA	False	NA	NA	NA	15244507	15242835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_15244038_15244364
Isoform_69771_7	chr17	-	2613	7	NNC	ENSMUSG00000024163.18	novel	2943	3	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.6672297233034	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAGTTGAGTGCCTTTT	NA	False	NA	-5	True	AATAAA	-23	NA	25155951	25134330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_25136143_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
Isoform_69772_10	chr17	-	1562	2	Genic_Genomic	ENSMUSG00000067370.5	novel	1580	1	NA	NA	-352	1	multi-exon	FALSE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCGTCTTCACCAGG	NA	False	NA	-1	True	AATAAA	-18	NA	34170814	34168881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_-_34170253_34170623
Isoform_69773_6	chr17	-	3093	3	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCTCACTGATGATTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	5103615	5097619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_5100466_5102907_5103034_5103494
Isoform_69775_7	chr17	-	814	4	NNC	ENSMUSG00000004945.16	novel	780	3	NA	NA	5	-9677	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	323.428508329121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATTGTCATTTTTCACT	3473	False	NA	NA	False	AATAAA	-33	NA	5490513	5470821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_5471291_5483716_5483855_5489806_5489908_5490407
Isoform_69777_3	chr17	-	2334	2	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	2	611	intron_retention	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGGTTTGGTGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	69584201	69581745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_69582041_69582162
Isoform_69780_3	chr17	-	1781	3	Intergenic	novelGene_4694	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAAAAAAGGTGGAGT	NA	False	NA	NA	False	NA	NA	NA	13542565	13364625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_13365786_13540327_13540397_13542013
Isoform_69781_3	chr17	-	417	2	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	37	-7808	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	33096879	33090443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_33090663_33096681
Isoform_69783_3	chr17	-	368	2	Intergenic	novelGene_5147	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTAGTTTCCAATTTG	NA	False	NA	NA	False	AGTAAA	-24	NA	74794376	74793886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_74794087_74794208
Isoform_69784_3	chr17	-	680	3	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTCACTGATGATTTAC	NA	False	NA	NA	False	ATTAAA	-29	NA	5103626	5097618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_5098041_5102907_5103034_5103494
Isoform_69785_3	chr17	-	4029	9	NNC	ENSMUSG00000052105.18	novel	611	4	NA	NA	-40	1570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.9280481289653	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTGTCTGAATGTT	NA	False	NA	NA	False	NA	NA	NA	66756785	66671768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_66671984_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_69787_19	chr17	+	4939	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	37.9476942646059	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTTCTAGGAATTGTA	9434	False	NA	10	True	AATAAA	-17	NA	3165241	3249133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_69790_3	chr17	+	4969	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-36	1	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_8	44.5724129927919	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCTAGGAATTGTATT	9403	False	NA	12	True	AATAAA	-19	NA	3165210	3249135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_69792_94	chr17	+	4878	20	FSM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	-12	0	-5	0	multi-exon	FALSE	canonical	3	106	junction_1	21.7366509485669	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	9434	False	NA	11	True	AATAAA	-18	NA	3165241	3249134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_69796_10	chr17	+	5402	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	60038	combination_of_known_splicesites	FALSE	canonical	3	64	junction_20	27.9703414351702	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGCAAGTCCTTT	9434	False	NA	18	True	AATAAA	-12	NA	3165241	3309172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
Isoform_69799_16	chr17	+	4883	20	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	34.9116812079359	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTAGGAATTGTATTT	9434	False	NA	13	True	AATAAA	-20	NA	3165241	3249136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227364_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_69802_22	chr17	+	4872	20	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	33.7657729635013	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTGTTCTAGGAATTG	9434	False	NA	8	True	AATAAA	-15	NA	3165241	3249131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_69804_5	chr17	+	4877	20	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	42.738203245112	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTTCTAGGAATTGTA	9434	False	NA	10	True	AATAAA	-17	NA	3165241	3249133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227364_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_69805_5	chr17	+	4969	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	46.6834017612256	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTGTTCTAGGAATTG	9434	False	NA	8	True	AATAAA	-15	NA	3165241	3249131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3212713_3212808_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_69814_20	chr17	+	7358	20	FSM	ENSMUSG00000069729.15	ENSMUST00000232180.2	7309	20	973	-1022	-509	1022	multi-exon	FALSE	canonical	3	53	junction_5	8.75742660692188	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGTTCTTGAATGCT	NA	False	NA	17	True	AATAAA	-28	NA	5046186	5394802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
Isoform_69816_3	chr17	+	7198	19	NIC	ENSMUSG00000069729.15	novel	11325	20	NA	NA	-519	1011	combination_of_known_splicesites	FALSE	canonical	1	10	junction_2	15.6781872534919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGCACTGTGATGGGTGT	NA	False	NA	6	True	AATAAA	-17	NA	5046176	5394791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_5046768_5090854_5091050_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
Isoform_69820_4	chr17	+	3051	9	FSM	ENSMUSG00000034265.9	ENSMUST00000089185.6	3078	9	24	3	24	-3	multi-exon	FALSE	canonical	1	2	junction_8	5.68853012649138	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACAGTTGTCAACAGCT	2739	False	NA	27	True	AATAAA	-28	NA	5542855	5804083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765293_5775501_5775605_5777099_5777210_5781746_5781850_5802966
Isoform_69825_148	chr17	+	2418	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	2	911	2	-911	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTTTCAGTCCTTTGG	NA	False	NA	NA	False	AATAAA	-24	NA	5891605	5981318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_69826_146	chr17	+	3318	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	15	-2	-8	2	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGATTCCCAAAGTATG	NA	False	NA	NA	False	AATAAA	-19	NA	5891618	5982231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_69831_20	chr17	+	2535	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-117	913	-117	-913	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAACTCTTTCAGTCCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	5891486	5981316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_69836_7	chr17	+	2630	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-218	919	-218	-919	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTATAACTCTTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	5891385	5981310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_69841_8	chr17	+	3399	19	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	75.5438103616082	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAGATTCCCAAAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	5891639	5982230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5971200_5971304_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_69843_38	chr17	+	2778	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	60	-593	9	593	multi-exon	FALSE	canonical	3	932	junction_1	74.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAACAAGATGAGAT	1750	False	NA	NA	False	NA	NA	NA	6130120	6137385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_6130187_6131076_6131150_6134746
Isoform_69844_196	chr17	+	788	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	49	1408	-2	-23	multi-exon	FALSE	canonical	3	932	junction_1	74.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGGAGTTTGGTTA	1739	False	NA	6	True	ATTAAA	-10	NA	6130109	6135384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_6130187_6131076_6131150_6134746
Isoform_69845_288	chr17	+	527	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	49	1669	-2	-284	multi-exon	FALSE	canonical	3	932	junction_1	74.5	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGCTTTTTAAGTGTTA	1739	False	NA	45	True	ATTAAA	-35	NA	6130109	6135123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_6130187_6131076_6131150_6134746
Isoform_69854_3	chr17	+	3764	12	NIC	ENSMUSG00000034377.11	novel	5223	11	NA	NA	0	-2535	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	8.30114997509929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGCAGTTTAAGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	6157132	6274581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_6157272_6187485_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426
Isoform_69856_13	chr17	+	4463	17	FSM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	36	0	36	0	multi-exon	TRUE	canonical	0	0	junction_14	255.117367291508	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6307170	6358589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
Isoform_69866_64	chr17	+	5128	16	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-4	6	-4	-6	intron_retention	FALSE	canonical	0	0	junction_14	220.750195671236	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	32	True	AATAAA	-41	NA	6320740	6358583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
Isoform_69870_238	chr17	+	4402	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-4	7	-4	-7	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATGAGACTTTTT	NA	False	NA	31	True	AATAAA	-40	NA	6320740	6358582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
Isoform_69878_114	chr17	+	1781	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	237.645407790157	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320740	6358589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6358271
Isoform_69880_25	chr17	+	4743	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	259.390202867707	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGAGACTTTTTGTT	NA	False	NA	34	True	AATAAA	-43	NA	6320740	6358585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
Isoform_69897_2264	chr17	+	697	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	66	8	66	-8	multi-exon	TRUE	canonical	3	3024	junction_1	2440.4692555941	2264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6697576	6703687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
Isoform_69912_7	chr17	-	1379	3	NNC	ENSMUSG00000092074.3	novel	3541	4	NA	NA	-392794	-2558	intron_retention	FALSE	canonical	3	556	junction_2	2416.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6760569	6360826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_6362108_6365191_6365234_6760513
Isoform_69914_2922	chr17	+	697	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	105	1787	-16	343	multi-exon	TRUE	canonical	3	5304	junction_1	1714.27572169707	2922	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6869174	6875291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
Isoform_69925_5	chr17	+	2779	17	NNC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	20.7076940712866	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCCAGCATTTATTAACA	NA	False	NA	11	True	AATAAA	-20	NA	6930418	7005448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001421_7001548_7001864_7001971_7002776_7002874_7003809_7004016_7005125
Isoform_69926_58	chr17	+	2651	16	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.5522035928561	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCCAGCATTTATTAAC	NA	False	NA	10	True	AATAAA	-19	NA	6930419	7005447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
Isoform_69927_4	chr17	+	3049	16	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	-1	394	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.5522035928561	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCGGTGTGTATTT	NA	False	NA	NA	False	AATAAA	-32	NA	6930411	7005837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
Isoform_69928_4	chr17	+	2110	15	NIC	ENSMUSG00000041831.18	novel	1504	9	NA	NA	12	3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	14.0407570003493	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCCCAGCATTTATTAA	NA	False	NA	9	True	AATAAA	-18	NA	6930424	7005446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_6930610_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
Isoform_69930_40	chr17	+	989	9	FSM	ENSMUSG00000094724.9	ENSMUST00000089119.13	1783	9	283	511	-29	-3	multi-exon	FALSE	canonical	0	0	junction_3	237.179784130098	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTTGGCTTTTTCT	NA	False	NA	NA	False	AAAAAG	-8	NA	7246276	7265586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
Isoform_69932_7	chr17	+	1200	10	NNC	ENSMUSG00000094724.9	novel	2448	10	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	330.475228335211	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTTGGCTTTTTCT	NA	False	NA	NA	False	AAAAAG	-8	NA	7246306	7265586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7260468_7260710_7262027_7262074_7263832_7263908_7265296
Isoform_69933_5	chr17	+	1247	9	NIC	ENSMUSG00000023809.11	novel	924	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	62.6178888178131	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCATTTCTCGAA	NA	False	NA	NA	False	AATAAA	-18	NA	7437522	7526788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7526509
Isoform_69936_16	chr17	+	2371	17	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	12	9998	0	7281	5prime_fragment	FALSE	canonical	3	158	junction_15	12.7174830450054	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTGTGAAAGAGTCATT	NA	False	NA	NA	False	NA	NA	NA	7437525	7560716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144
Isoform_69939_347	chr17	+	5394	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	12	0	0	0	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTGGGATAATGAG	NA	False	NA	NA	False	AATAAA	-22	NA	7437525	7570714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
Isoform_69949_6	chr17	+	5274	20	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	41.8400198090026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTTTCTGGGATAAT	NA	False	NA	NA	False	AATAAA	-19	NA	7437525	7570711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_7437843_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
Isoform_69954_69	chr17	+	1532	8	FSM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	334	323	-8	-3	multi-exon	TRUE	canonical	3	57	junction_4	7.41482244134913	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACTTTTTCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	8164818	8198333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
Isoform_69957_7	chr17	+	1160	7	FSM	ENSMUSG00000069135.12	ENSMUST00000162586.2	1159	7	2	-3	2	3	multi-exon	FALSE	canonical	3	66	junction_6	120.467146282019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAAAC	NA	False	NA	NA	False	AATAAA	-7	NA	8384353	8394916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350
Isoform_69958_77	chr17	+	3110	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	68	327	29	2	multi-exon	FALSE	canonical	3	46	junction_7	116.477107908235	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384400	8415309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
Isoform_69959_12	chr17	+	2152	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	38	1315	-1	544	multi-exon	FALSE	canonical	3	46	junction_7	116.477107908235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTAATGTACACTGTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	8384370	8414321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
Isoform_69963_393	chr17	+	3050	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	29	-2	29	2	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384400	8415309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
Isoform_69964_67	chr17	+	3094	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	-17	0	3	0	multi-exon	TRUE	canonical	3	299	junction_6	38.250587420542	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTACAGTGTTGGTTTT	NA	False	NA	30	True	ATTAAA	-22	NA	8384354	8415307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
Isoform_69980_14	chr17	+	956	5	FSM	ENSMUSG00000023861.18	ENSMUST00000124023.8	555	5	-11	-390	-11	0	multi-exon	FALSE	canonical	3	18	junction_2	407.512576493045	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGTGTGACTATATAT	2200	False	NA	4	True	AATAAA	-18	NA	8502672	8516493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8502794_8512246_8512328_8515366_8515464_8515655_8515789_8515969
Isoform_69982_132	chr17	+	930	4	NIC	ENSMUSG00000023861.18	novel	958	5	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	472.094858641307	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2146	False	NA	5	True	AATAAA	-19	NA	8502618	8516494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
Isoform_69984_443	chr17	+	904	4	NIC	ENSMUSG00000023861.18	novel	958	5	NA	NA	17	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	472.094858641307	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2172	False	NA	5	True	AATAAA	-19	NA	8502644	8516494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
Isoform_69987_253	chr17	+	990	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	57	2	-10	0	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2980	False	NA	NA	False	AATAAA	-17	NA	8529990	8546272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
Isoform_69988_113	chr17	+	1034	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	14	1	-6	1	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTCTGGATCAACTGT	2937	False	NA	NA	False	AATAAA	-18	NA	8529947	8546273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
Isoform_69989_7	chr17	+	2432	7	FSM	ENSMUSG00000073468.13	ENSMUST00000150728.8	2490	7	56	2	-11	0	multi-exon	FALSE	canonical	3	775	junction_6	38.5947607267561	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2979	False	NA	NA	False	AATAAA	-17	NA	8529989	8546272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8542168_8543265_8543296_8545786
Isoform_69990_7	chr17	+	2110	7	NIC	ENSMUSG00000073468.13	novel	1049	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	730	junction_4	51.8609251320834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2978	False	NA	NA	False	AATAAA	-17	NA	8529988	8546272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8540668_8542108_8542168_8543265_8543296_8545786
Isoform_69991_12	chr17	+	3548	6	NIC	ENSMUSG00000073468.13	novel	2490	7	NA	NA	-9	0	intron_retention	FALSE	canonical	3	775	junction_5	42.1872018507983	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2981	False	NA	NA	False	AATAAA	-17	NA	8529991	8546272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8542168_8543265_8543296_8545786
Isoform_69992_37	chr17	+	820	6	FSM	ENSMUSG00000073468.13	ENSMUST00000145276.8	810	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	190	junction_1	242.374586126516	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2980	False	NA	NA	False	AATAAA	-17	NA	8529990	8546272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8530118_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
Isoform_69995_29	chr17	+	2194	8	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-150	-5	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	9.95295054191449	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	5	True	AATAAA	-15	NA	8653104	8661323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
Isoform_69996_52	chr17	+	2190	8	FSM	ENSMUSG00000062327.11	ENSMUST00000074667.9	2046	8	-149	5	-149	-5	multi-exon	FALSE	canonical	3	22	junction_5	7.70634511957782	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	5	True	AATAAA	-15	NA	8653105	8661323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
Isoform_69998_9	chr17	+	2701	7	FSM	ENSMUSG00000062327.11	ENSMUST00000177118.2	761	7	-1191	-749	-203	-5	multi-exon	FALSE	canonical	3	13	junction_4	10.7496769977314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	5	True	AATAAA	-15	NA	8653051	8661323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
Isoform_69999_6	chr17	+	2645	7	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-150	-5	intron_retention	FALSE	canonical	3	22	junction_4	8.29491142541954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	5	True	AATAAA	-15	NA	8653104	8661323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
Isoform_70001_4	chr17	+	3570	22	FSM	ENSMUSG00000023868.18	ENSMUST00000089085.10	7769	22	-49	4248	-49	0	multi-exon	FALSE	canonical	1	1	junction_6	1.87476377952662	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGCAAGCAAATCTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	9020475	9201232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_9020978_9117692_9117822_9139335_9139365_9147923_9148045_9149341_9149392_9159972_9160114_9161703_9161860_9163201_9163253_9163767_9163827_9165627_9165680_9168181_9168325_9170328_9170422_9172568_9172756_9180691_9180835_9181719_9181804_9183396_9183548_9186250_9186407_9188359_9188533_9193554_9193667_9195967_9196049_9197736_9197826_9200364
Isoform_70002_6	chr17	+	1854	10	FSM	ENSMUSG00000023873.14	ENSMUST00000151609.2	1853	10	-2	1	-2	-1	multi-exon	FALSE	canonical	1	1	junction_6	3.01027048536535	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTTGCGTGCTCACTG	NA	False	NA	NA	False	AATAAA	-17	NA	9207186	9227149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_9207254_9210877_9211585_9212427_9212551_9214029_9214090_9215810_9215936_9219959_9220019_9220601_9220778_9224023_9224078_9224524_9224587_9226728
Isoform_70004_4	chr17	+	2020	9	NIC	ENSMUSG00000023827.9	novel	967	7	NA	NA	-97	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	85.5599205235722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAGTGTTTACACAAATC	NA	False	NA	31	True	ATTAAA	-22	NA	12337493	12438535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_12337728_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
Isoform_70005_11	chr17	+	508	2	ISM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	41	67537	-4	12453	5prime_fragment	FALSE	canonical	3	227	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12338211	12370995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_12338303_12370578
Isoform_70006_220	chr17	+	1879	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	32	4	-13	-4	multi-exon	FALSE	canonical	3	218	junction_3	26.473748790075	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	24	True	ATTAAA	-15	NA	12338202	12438528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
Isoform_70007_126	chr17	+	1902	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	9	4	9	-4	multi-exon	FALSE	canonical	3	218	junction_3	26.473748790075	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	24	True	ATTAAA	-15	NA	12338179	12438528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
Isoform_70010_7	chr17	+	1710	8	NIC	ENSMUSG00000023827.9	novel	1915	9	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	91.6245667083332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGGCAAGTGTTTACA	NA	False	NA	25	True	ATTAAA	-16	NA	12338202	12438529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_12338303_12370578_12370837_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
Isoform_70011_6	chr17	+	1802	9	NIC	ENSMUSG00000023827.9	novel	967	7	NA	NA	114	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	85.5599205235722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	24	True	ATTAAA	-15	NA	12337704	12438528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_12337728_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
Isoform_70016_3682	chr17	+	1875	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	60	511	0	0	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	3682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135328	13143443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_70017_2653	chr17	+	1919	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	16	511	16	0	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135284	13143443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_70019_108	chr17	+	2467	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	16	-37	16	37	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCTCCTGCTGTCT	NA	False	NA	5	True	NA	NA	NA	13135284	13143991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_70022_193	chr17	+	2400	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	83	-37	-10	37	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCTCCTGCTGTCT	NA	False	NA	5	True	NA	NA	NA	13135351	13143991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_70023_113	chr17	+	2330	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	17	99	17	-99	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGTTTCTCTGTGT	NA	False	NA	8	True	AATAAA	-16	NA	13135285	13143855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_70035_122	chr17	+	1787	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	115	0	2	0	multi-exon	FALSE	canonical	3	149	junction_1	1038.79458989735	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135330	13143443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_70037_84	chr17	+	1833	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	69	0	16	0	multi-exon	FALSE	canonical	3	149	junction_1	1038.79458989735	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135284	13143443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_70067_2569	chr17	+	916	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	165	4780	-14	-262	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	2569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	46	True	ATTAAA	-34	NA	13226868	13234241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_70069_415	chr17	+	3674	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	167	2020	-12	-2020	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCCAGTGGTATGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	13226870	13237001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_70070_50	chr17	+	3824	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	17	2020	17	-2020	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCCAGTGGTATGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	13226720	13237001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_70074_347	chr17	+	1061	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	20	4780	20	-262	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	46	True	ATTAAA	-34	NA	13226723	13234241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_70083_51	chr17	+	5682	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	167	12	-12	-12	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAGAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	13226870	13239009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_701_1475	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1475	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4001_+_0_4000
Isoform_70100_90	chr17	+	7377	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	63.9601365185812	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980767	14126057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
Isoform_70102_6	chr17	+	7604	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	1	34	junction_30	84.9919748920202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980770	14126056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
Isoform_70105_54	chr17	+	7370	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	70.780765419582	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980770	14126056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
Isoform_70109_30	chr17	+	7373	32	FSM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	-168	-1787	-33	0	multi-exon	FALSE	canonical	1	133	junction_20	64.7559574638129	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980767	14126056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
Isoform_70111_9	chr17	+	7289	32	FSM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	-194	-1677	-59	-110	multi-exon	FALSE	canonical	1	133	junction_20	64.7559574638129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTATTTGCTATTGTTTT	NA	False	NA	22	True	AATAAA	-16	NA	13980741	14125946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
Isoform_70112_63	chr17	+	7342	32	FSM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	-133	-1791	0	3	multi-exon	FALSE	canonical	1	133	junction_20	64.7559574638129	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	13980802	14126060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
Isoform_70118_22	chr17	+	7366	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	71.4884853524067	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980772	14126057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
Isoform_70120_22	chr17	+	7327	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	71.4884853524067	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980811	14126057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
Isoform_70138_19	chr17	+	2517	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	11	-5	11	3	multi-exon	FALSE	canonical	3	15	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCTGTTACTTTAGGA	NA	False	NA	12	True	AATAAA	-20	NA	15163502	15166201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15163582_15163763
Isoform_70139_20	chr17	+	1553	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	27	943	-12	5	multi-exon	FALSE	canonical	3	15	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAGGTCATCGTTAAT	NA	False	NA	13	True	AATAAA	-18	NA	15163518	15165253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15163582_15163763
Isoform_70140_15	chr17	+	2478	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	29	-1	-17	1	multi-exon	FALSE	canonical	3	37	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCTGTTACTTTAG	NA	False	NA	10	True	AATAAA	-18	NA	15163474	15166199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15163582_15163828
Isoform_70142_16	chr17	+	2440	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	67	-1	-18	1	multi-exon	FALSE	canonical	3	37	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCTGTTACTTTAG	NA	False	NA	10	True	AATAAA	-18	NA	15163512	15166199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15163582_15163828
Isoform_70143_20	chr17	+	1481	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	77	948	-8	2	multi-exon	FALSE	canonical	3	37	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTTAAGGTCATCGTT	NA	False	NA	10	True	AATAAA	-15	NA	15163522	15165250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15163582_15163828
Isoform_70144_3	chr17	+	1514	2	FSM	ENSMUSG00000050088.10	ENSMUST00000174004.2	1466	2	-43	-5	-4	5	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAGGTCATCGTTAAT	NA	False	NA	13	True	AATAAA	-18	NA	15163487	15165253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15163582_15163833
Isoform_70145_3	chr17	+	794	6	NIC	ENSMUSG00000116953.2	novel	2909	11	NA	NA	0	-6216	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	84.2415574404937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCATGTCCCTCTGAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	15199138	15203420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15203150
Isoform_70146_6	chr17	+	1304	11	ISM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	405	1715	-4	-184	5prime_fragment	FALSE	canonical	0	0	junction_7	77.0690599397709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTAGCAACAGTCAGAT	NA	False	NA	NA	False	ACTAAA	-25	NA	15199134	15209452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159
Isoform_70148_10	chr17	+	1437	12	FSM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	404	3	-5	-3	multi-exon	FALSE	canonical	0	0	junction_7	75.6540626145262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTTTGGCTCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	15199133	15211164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
Isoform_70149_4	chr17	+	2115	12	FSM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	399	-670	-10	3	multi-exon	FALSE	canonical	0	0	junction_7	75.6540626145262	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCAAGTTTTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	15199128	15211837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
Isoform_70150_3	chr17	+	1261	11	NIC	ENSMUSG00000116953.2	novel	2909	11	NA	NA	0	-37	combination_of_known_splicesites	FALSE	canonical	3	19	junction_6	76.5904040986859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTTCTGAAGCTGAAATA	NA	False	NA	NA	False	AATATA	-26	NA	15199138	15211130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
Isoform_70151_3	chr17	+	1500	10	ISM	ENSMUSG00000116953.2	ENSMUST00000231723.2	1586	11	592	0	0	0	3prime_fragment	FALSE	canonical	0	0	junction_6	81.1525008552523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTAATGTTTTGGCCCT	NA	False	NA	NA	False	AAAAAG	-18	NA	15199760	15209673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159
Isoform_70152_3	chr17	+	3295	5	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	66	5924	66	-5924	intron_retention	FALSE	canonical	3	116	junction_1	56.3488021168152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15230503	15236787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933
Isoform_70153_6	chr17	+	1482	11	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	69	1713	69	-1713	5prime_fragment	FALSE	canonical	0	0	junction_7	68.9100863444532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15230506	15240998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527
Isoform_70154_10	chr17	+	1442	12	FSM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	63	179	63	-179	multi-exon	FALSE	canonical	0	0	junction_7	68.2306491805794	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTTTGGCTCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	15230500	15242532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176
Isoform_70156_4	chr17	+	3317	5	ISM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	405	5727	-4	-4196	intron_retention	FALSE	canonical	3	116	junction_1	56.0507582464323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	15199134	15205440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561
Isoform_70157_3	chr17	+	870	6	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	61	5927	61	-5927	5prime_fragment	FALSE	canonical	3	116	junction_1	50.8173198821032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15230498	15236784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450
Isoform_70159_4	chr17	+	1445	12	ISM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	407	10277	0	343	5prime_fragment	FALSE	canonical	0	0	junction_7	67.6666598813931	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCTCTGTTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	15261876	15273835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475
Isoform_70160_19	chr17	+	2520	18	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	59.4887678037601	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAACTCTATGTTGCCT	NA	False	NA	7	True	ATTAAA	-20	NA	15261881	15284487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
Isoform_70162_4	chr17	+	2499	18	FSM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	411	-375	4	2	multi-exon	FALSE	canonical	0	0	junction_7	62.8043041744542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAACTCTATGTTGCCT	NA	False	NA	7	True	ATTAAA	-20	NA	15261880	15284487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
Isoform_70163_3	chr17	+	2306	17	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	67.4146451077212	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTATGTTGCCTTTCAT	NA	False	NA	12	True	ATTAAA	-25	NA	15261881	15284492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15281330_15281445_15283841
Isoform_70165_4	chr17	+	2614	17	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	63.8266389820896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTATGTTGCCTTTCATT	NA	False	NA	13	True	ATTAAA	-26	NA	15262507	15284493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
Isoform_70167_36	chr17	+	2664	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	69	29320	23	-4735	5prime_fragment	FALSE	canonical	3	53	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTTGTTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	15616532	15624380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15616823_15622006
Isoform_70171_3	chr17	+	3345	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	68	28640	22	-4055	5prime_fragment	FALSE	canonical	3	53	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAGCAACAATATGG	NA	False	NA	NA	False	AATAAA	-11	NA	15616531	15625060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15616823_15622006
Isoform_70172_39	chr17	+	2951	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	69	1400	23	-1400	multi-exon	FALSE	canonical	2	12	junction_2	12.6526677028997	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCATTAGTCTTTGAACT	NA	False	NA	5	True	ATTAAA	-19	NA	15616532	15652300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
Isoform_70173_3	chr17	+	4500	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	63	-143	17	-2	multi-exon	TRUE	canonical	2	12	junction_2	12.6526677028997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCACTTTTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	15616526	15653843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
Isoform_70174_38	chr17	+	1880	10	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	107.763229258625	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720206	15737689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15720287_15721415_15721465_15721573_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
Isoform_70176_88	chr17	+	1839	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	52	0	12	0	multi-exon	FALSE	canonical	3	123	junction_2	77.8728932299295	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720201	15737689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
Isoform_70178_3	chr17	+	3062	8	NIC	ENSMUSG00000014767.18	novel	1891	9	NA	NA	-4	-17	intron_retention	TRUE	canonical	3	123	junction_2	82.0912881604177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCTGAGACCATTGTT	NA	False	NA	6	True	AAGAAA	-14	NA	15720179	15737672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15735973_15736965
Isoform_70179_11	chr17	+	1978	9	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	12	-16	intron_retention	FALSE	canonical	3	87	junction_2	86.7564839075443	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGAGACCATTGTTT	NA	False	NA	7	True	AAGAAA	-15	NA	15720201	15737673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15720287_15721415_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
Isoform_70180_3	chr17	+	1835	9	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	6	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	121.53131026612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATTGTTTTGTTTGCTT	NA	False	NA	16	True	AAGAAA	-24	NA	15720195	15737682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15720287_15721573_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
Isoform_70181_112	chr17	+	1788	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	52	10954	12	-2	multi-exon	FALSE	canonical	3	150	junction_1	66.6565978791022	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTGCTTGTCTG	NA	False	NA	21	True	AAGAAA	-29	NA	15720201	15737687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
Isoform_70183_3	chr17	+	1630	7	FSM	ENSMUSG00000014767.18	ENSMUST00000118001.8	1652	7	12	10	0	-10	multi-exon	FALSE	canonical	2	10	junction_5	125.630963097832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCATTGTTTTGTTTG	NA	False	NA	13	True	AAGAAA	-21	NA	15720183	15737679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15735877_15735973_15736965
Isoform_70184_16	chr17	+	3117	8	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	3	-15	intron_retention	FALSE	canonical	3	87	junction_1	85.9499142239365	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGAGACCATTGTTTT	NA	False	NA	8	True	AAGAAA	-16	NA	15720192	15737674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
Isoform_70190_33	chr17	+	4933	24	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-4	16485	-4	777	5prime_fragment	FALSE	canonical	3	287	junction_10	32.2930227676305	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATTAGCTTCTAT	NA	False	NA	NA	False	AATAAA	-11	NA	15925224	15976387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182
Isoform_70191_35	chr17	+	4909	24	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	20	16485	13	777	5prime_fragment	FALSE	canonical	3	287	junction_10	32.2930227676305	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATTAGCTTCTAT	NA	False	NA	NA	False	AATAAA	-11	NA	15925248	15976387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182
Isoform_70193_157	chr17	+	6770	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	20	1126	13	-1126	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATATGTGGGCTCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	15925248	15991746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
Isoform_70194_57	chr17	+	6836	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-39	1119	-39	-1119	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGGCTCCTGTAGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	15925189	15991753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
Isoform_70196_64	chr17	+	7907	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	5	4	-2	-4	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAATGGCTTGTCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	15925233	15992868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
Isoform_70200_31	chr17	+	7959	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-39	-4	-39	4	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTCTGCTATGTGAG	NA	False	NA	NA	False	AATAAA	-27	NA	15925189	15992876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
Isoform_70204_13	chr17	+	4286	25	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-39	776	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_24	77.1481259223666	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAATTAGCTTCTA	NA	False	NA	NA	False	AATAAA	-10	NA	15925189	15976386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15976024
Isoform_70219_39	chr17	+	2076	4	FSM	ENSMUSG00000060149.8	ENSMUST00000232328.2	1598	4	0	-478	0	-2	multi-exon	FALSE	canonical	3	27	junction_1	5.55777733351102	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCCCAAGTGGCCTAC	NA	False	NA	22	True	NA	NA	NA	17171813	17194417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17171971_17191161_17191289_17191432_17191494_17192686
Isoform_70220_3	chr17	+	1964	3	FSM	ENSMUSG00000060149.8	ENSMUST00000190415.2	1964	3	-2	2	-2	-2	multi-exon	FALSE	canonical	2	8	junction_1	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCCCAAGTGGCCTAC	NA	False	NA	22	True	NA	NA	NA	17171798	17194417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17171971_17191432_17191494_17192686
Isoform_70221_61	chr17	+	2697	4	FSM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	-35	5	-35	-5	multi-exon	FALSE	canonical	3	176	junction_3	31.9826341768293	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17284339	17309885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505
Isoform_70222_9	chr17	+	2694	4	Fusion	ENSMUSG00000095990.2_ENSMUSG00000096696.2	novel	2667	4	NA	NA	-33	6	multi-exon	FALSE	canonical	3	169	junction_3	41.6973220562984	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17284341	17367099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_+_17284469_17362997_17363125_17363366_17363428_17364720
Isoform_70224_21	chr17	+	2727	4	FSM	ENSMUSG00000095990.2	ENSMUST00000147630.2	2684	4	-36	-7	-36	7	multi-exon	FALSE	canonical	3	169	junction_3	43.3615292883245	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17341640	17367100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720
Isoform_70225_72	chr17	+	2667	4	FSM	ENSMUSG00000095990.2	ENSMUST00000147630.2	2684	4	23	-6	23	6	multi-exon	FALSE	canonical	3	169	junction_3	43.3615292883245	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17341699	17367099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720
Isoform_70229_49	chr17	+	2473	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	-3	-276	-3	276	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCCAAGTATGCTGCT	6221	False	NA	14	True	NA	NA	NA	17455130	17486601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
Isoform_70231_21	chr17	+	2230	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	-12	-1692	-12	285	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAAGTATGCTGCTCTT	NA	False	NA	23	True	NA	NA	NA	17514692	17540058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
Isoform_70232_17	chr17	+	2095	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	-43	-1526	-43	119	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17514661	17539892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
Isoform_70233_5	chr17	+	5267	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	-37	-4704	-37	3297	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGTCACTTTGAGTTA	NA	False	NA	NA	False	TATAAA	-25	NA	17514667	17543070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
Isoform_70234_4	chr17	+	506	3	NNC	ENSMUSG00000072761.11	novel	526	4	NA	NA	-22	54154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17514682	17593927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_17514852_17590167_17590297_17593719
Isoform_70237_41	chr17	+	1600	8	FSM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	346	junction_3	41.8120185826896	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATTTGTCTTTTGAA	NA	False	NA	NA	False	AATGAA	-20	NA	17594829	17608016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
Isoform_70241_518	chr17	+	2031	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	257	932	-6	-932	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAATCTGTAGTTCTCTC	NA	False	NA	7	True	AATAAA	-16	NA	17594827	17614229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
Isoform_70242_103	chr17	+	2071	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	222	927	-41	-927	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTAGTTCTCTCTTTTC	NA	False	NA	12	True	AATAAA	-21	NA	17594792	17614234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
Isoform_70246_12	chr17	+	2301	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	-13	932	-13	-932	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAATCTGTAGTTCTCTC	NA	False	NA	7	True	AATAAA	-16	NA	17594557	17614229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
Isoform_70250_13	chr17	+	4231	9	NIC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	5	-933	intron_retention	FALSE	canonical	3	388	junction_8	30.9553610058096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594838	17614228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_17594933_17597980_17598120_17598744_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
Isoform_70251_1985	chr17	+	2258	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	145	7	-31	4	multi-exon	FALSE	canonical	3	1213	junction_1	77.3781135010385	1985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCTAGTCTTAGTAATC	NA	False	NA	32	True	AATAAA	-17	NA	21165717	21186171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
Isoform_70252_275	chr17	+	2289	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	106	15	-70	-4	multi-exon	FALSE	canonical	3	1213	junction_1	77.3781135010385	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGGTTCTCTAGTCT	NA	False	NA	24	True	AATAAA	-9	NA	21165678	21186163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
Isoform_7026_3	chr10	+	2401	9	FSM	ENSMUSG00000019564.13	ENSMUST00000105376.2	4892	9	-18	2509	-18	-449	multi-exon	FALSE	canonical	3	17	junction_1	10.5089247784919	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACACTTGAATCTCTCAG	2127	False	NA	NA	False	AATAAA	-15	NA	79763156	79788028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79763235_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
Isoform_70275_19	chr17	+	3770	5	FSM	ENSMUSG00000067942.7	ENSMUST00000088811.7	3800	5	23	7	7	-7	multi-exon	FALSE	canonical	3	20	junction_1	17.6405073623181	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATTTGTTTTTCTTT	NA	False	NA	6	True	AGTAAA	-17	NA	21229225	21249116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21245722
Isoform_70276_10	chr17	+	2025	5	NIC	ENSMUSG00000067942.7	novel	2087	6	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	20.5836707124847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCACATAAGTTCTTAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	21229200	21263308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21261684
Isoform_70277_36	chr17	+	3893	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232354.2	1041	5	13	-2865	7	-6	multi-exon	FALSE	canonical	3	24	junction_4	15.2807067899361	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAATTTGTTTTTCTTTT	NA	False	NA	7	True	AGTAAA	-18	NA	21229225	21249117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21245722
Isoform_70278_5	chr17	+	2103	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232663.2	552	5	-61	-1490	-16	2	multi-exon	FALSE	canonical	2	12	junction_4	19.0394327646598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCACATAAGTTCTTAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	21229244	21263308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21261684
Isoform_70279_6	chr17	+	2926	4	FSM	ENSMUSG00000062743.10	ENSMUST00000162659.2	2917	4	-9	0	-9	0	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGGTTTTGTTTTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	21604000	21619527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21604283_21612722_21612814_21613437_21613565_21617101
Isoform_7028_184	chr10	+	2952	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	3	956	0	-956	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTTGCTGGCTTTTTT	2289	False	NA	4	True	ATTAAA	-18	NA	79795988	79805081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
Isoform_70281_11	chr17	+	2087	5	NIC	ENSMUSG00000023882.16	novel	2832	5	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	8.22724133595217	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	21643503	21655416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_21643580_21647593_21647634_21647998_21648091_21650456_21650584_21653664
Isoform_70282_11	chr17	+	2043	4	FSM	ENSMUSG00000023882.16	ENSMUST00000167749.2	822	4	-12	-1209	-12	0	multi-exon	FALSE	canonical	3	11	junction_1	10.1980390271856	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	21643507	21655416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21643580_21647998_21648091_21650456_21650584_21653664
Isoform_70283_5	chr17	+	2327	5	FSM	ENSMUSG00000023882.16	ENSMUST00000165230.8	2832	5	19	486	-12	0	multi-exon	FALSE	canonical	2	4	junction_1	11.7340317027013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	21643507	21655416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21643824_21647593_21647634_21647998_21648091_21650456_21650584_21653664
Isoform_70284_5	chr17	+	2288	4	FSM	ENSMUSG00000023882.16	ENSMUST00000007884.15	2300	4	12	0	12	0	multi-exon	FALSE	canonical	2	3	junction_1	13.8884444373331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	21643506	21655416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21643824_21647998_21648091_21650456_21650584_21653664
Isoform_70285_117	chr17	+	2561	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	14	-1	14	1	multi-exon	FALSE	canonical	3	80	junction_1	22.3271135617661	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTCTCTCTCTCTGTC	NA	False	NA	3	True	AATAAA	-19	NA	21670649	21685850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
Isoform_70286_4	chr17	+	459	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	-10	2125	-10	-2125	multi-exon	FALSE	canonical	3	80	junction_1	22.3271135617661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCCAACTGTGCCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	21670625	21683724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
Isoform_70289_63	chr17	+	2399	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-2	668	-2	41	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAACTGTGGAAAAAGCT	1473	False	NA	NA	False	AATAAA	-28	NA	21709257	21730067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
Isoform_7029_2933	chr10	+	1395	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	3	2513	0	79	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	2933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGCGCCTTGGTTGTT	2289	False	NA	29	True	ACTAAA	-17	NA	79795988	79803524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
Isoform_70291_3	chr17	+	3068	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-2	-1	-2	1	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAAATGTTTTAATTC	1473	False	NA	NA	False	ATTAAA	-14	NA	21709257	21730736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
Isoform_70293_84	chr17	+	763	5	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	-4	-2244	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	24.0572234474388	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAATAAAAT	1471	False	NA	NA	False	NA	NA	NA	21709255	21727782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21727601
Isoform_70295_8	chr17	+	2212	6	Fusion	ENSMUSG00000117037.2_ENSMUSG00000057409.8	novel	3065	5	NA	NA	-2	829	multi-exon	FALSE	canonical	3	7	junction_3	73.6787622045865	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCCTTGGTGGCCATT	1473	False	NA	NA	False	AATAAA	-15	NA	21709257	21752086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21742853_21742938_21748201_21748329_21750538
Isoform_70296_5	chr17	+	3572	6	Fusion	ENSMUSG00000117037.2_ENSMUSG00000057409.8	novel	3065	5	NA	NA	-2	2189	multi-exon	FALSE	canonical	3	7	junction_3	73.6787622045865	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGAGTCTTTCATCC	1473	False	NA	NA	False	AATAAA	-17	NA	21709257	21753446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21742853_21742938_21748201_21748329_21750538
Isoform_70298_8	chr17	+	2705	5	FSM	ENSMUSG00000051341.7	ENSMUST00000233281.2	3164	5	72	387	72	148	multi-exon	FALSE	canonical	3	13	junction_3	0.707106781186548	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGGGGAAAGCTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	21755872	21782476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21756096_21758834_21758933_21775246_21775338_21777396_21777524_21780310
Isoform_70300_51	chr17	+	2626	6	FSM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	24	2	24	-2	multi-exon	FALSE	canonical	3	80	junction_2	15.6025638918737	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCATGGAAAGATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	21787293	21808959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
Isoform_70301_18	chr17	+	2677	6	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	38.4010416525385	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATGGAAAGATTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	21787276	21808960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_21787508_21789277_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
Isoform_70303_18	chr17	+	5170	5	ISM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-43	-1	-43	1	intron_retention	FALSE	canonical	3	47	junction_2	7.1239034243875	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGAAATTCAATGAGT	NA	False	NA	10	True	AATAAA	-25	NA	21926679	21944618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924
Isoform_70306_53	chr17	+	4283	6	FSM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-74	0	-74	0	multi-exon	FALSE	canonical	3	33	junction_5	11.689311356962	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGGAAATTCAATGAG	NA	False	NA	9	True	AATAAA	-24	NA	21926648	21944617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940968
Isoform_70307_3	chr17	+	4436	6	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-46	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	19.6611291639112	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTGGAAATTCAATG	NA	False	NA	7	True	AATAAA	-22	NA	21926676	21944615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940785
Isoform_70310_136	chr17	+	4642	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-95	-3907	-95	0	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGACTTGTATCATAG	NA	False	NA	11	True	AATAAA	-25	NA	21949680	21967949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
Isoform_70319_4	chr17	+	1396	6	NIC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-87	634	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	67.9923525111464	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTCCTTTACCTGTG	NA	False	NA	4	True	AATAAA	-17	NA	21949688	21988957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21988273
Isoform_70321_7	chr17	+	4572	6	FSM	ENSMUSG00000061544.14	ENSMUST00000065871.14	4525	6	-46	-1	-2	0	multi-exon	FALSE	canonical	3	15	junction_1	72.3756865252413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACTTGTATCATAGT	NA	False	NA	12	True	AATAAA	-26	NA	21952658	21967950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_21952940_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
Isoform_70323_11	chr17	+	2793	4	FSM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	-53	1	-53	-1	multi-exon	TRUE	canonical	3	11	junction_3	5.73488351136175	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGACTTGTTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	22181479	22213346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_22181801_22207011_22207083_22209759_22209887_22211072
Isoform_70325_3	chr17	+	4231	5	NNC	ENSMUSG00000053347.16	novel	1338	6	NA	NA	-33	24244	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	9.09326673973661	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCTGGTTGAAGTTT	NA	False	NA	NA	False	AATAAA	-29	NA	22181499	22237591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_22181801_22207011_22207083_22209759_22209887_22225286_22225364_22233936
Isoform_70327_11	chr17	+	4406	4	FSM	ENSMUSG00000044501.18	ENSMUST00000088765.9	2973	4	21	-1454	19	1453	multi-exon	FALSE	canonical	3	11	junction_1	13.4412301024373	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGACATTACCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	22580454	22597715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_22580689_22590971_22591070_22592623_22592751_22593768
Isoform_70329_6	chr17	+	2970	7	FSM	ENSMUSG00000071266.14	ENSMUST00000088763.13	2935	7	-35	0	11	0	multi-exon	FALSE	canonical	3	18	junction_4	23.5849528301415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGTTGTTTTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	22643213	22675670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670059_22670134_22672432_22672560_22673404
Isoform_70330_7	chr17	+	972	7	FSM	ENSMUSG00000071266.14	ENSMUST00000120222.8	2926	7	-51	2005	-14	-1154	multi-exon	FALSE	canonical	3	27	junction_4	20.6881608655772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTGTTCTATCATT	NA	False	NA	NA	False	TATAAA	-17	NA	22643188	22673665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22672432_22672560_22673404
Isoform_70331_12	chr17	+	2929	7	FSM	ENSMUSG00000071266.14	ENSMUST00000120222.8	2926	7	-5	2	-5	-2	multi-exon	FALSE	canonical	3	27	junction_4	20.6881608655772	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGGTTGTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	22643234	22675668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22672432_22672560_22673404
Isoform_70334_75	chr17	+	2737	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	-38	-1	-38	1	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	841	False	NA	29	True	AGTAAA	-13	NA	23819791	23829987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
Isoform_70335_294	chr17	+	2698	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	1	-1	1	1	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	880	False	NA	29	True	AGTAAA	-13	NA	23819830	23829987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
Isoform_70336_78	chr17	+	2602	7	FSM	ENSMUSG00000023902.19	ENSMUST00000120967.8	2609	7	1	6	1	1	multi-exon	FALSE	canonical	3	46	junction_6	80.8484521943508	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	880	False	NA	29	True	AGTAAA	-13	NA	23819830	23829987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
Isoform_70337_28	chr17	+	2641	7	FSM	ENSMUSG00000023902.19	ENSMUST00000120967.8	2609	7	-38	6	-38	1	multi-exon	FALSE	canonical	3	46	junction_6	80.8484521943508	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	841	False	NA	29	True	AGTAAA	-13	NA	23819791	23829987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
Isoform_70339_35	chr17	+	2415	5	NIC	ENSMUSG00000023902.19	novel	2698	6	NA	NA	13	1	intron_retention	FALSE	canonical	3	18	junction_2	109.005733794145	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	898	False	NA	29	True	AGTAAA	-13	NA	23819848	23829987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_23819934_23824478_23824939_23826553_23826619_23827081_23827140_23828240
Isoform_70340_8	chr17	+	2337	6	NIC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	111.941055917836	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	880	False	NA	29	True	AGTAAA	-13	NA	23819830	23829987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_23819934_23824478_23824939_23826553_23826619_23827081_23827140_23828240_23828441_23828536
Isoform_70341_9	chr17	+	2358	4	FSM	ENSMUSG00000023902.19	ENSMUST00000115509.8	2368	4	11	-1	5	1	multi-exon	FALSE	canonical	1	2	junction_2	114.030210422014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	890	False	NA	29	True	AGTAAA	-13	NA	23819840	23829987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23819934_23824478_23824939_23827081_23827140_23828240
Isoform_70343_17	chr17	+	4086	4	NIC	ENSMUSG00000023902.19	novel	2698	6	NA	NA	-38	0	intron_retention	FALSE	canonical	3	153	junction_1	60.5768566001535	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	841	False	NA	28	True	AGTAAA	-12	NA	23819791	23829986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_23819934_23824478_23826619_23827081_23827140_23828240
Isoform_70350_17	chr17	+	2634	5	ISM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	4610	-1	-15	1	3prime_fragment	FALSE	canonical	3	169	junction_1	52.3473972609909	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	1942	False	NA	29	True	AGTAAA	-13	NA	23824439	23829987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
Isoform_70357_6	chr17	+	688	4	FSM	ENSMUSG00000023904.11	ENSMUST00000179928.2	597	4	-39	-52	-8	-1	multi-exon	FALSE	canonical	2	24	junction_1	165.748805928328	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCTCAGCAGCCTTTG	NA	False	NA	10	True	AATAAA	-18	NA	23892561	23894200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23892678_23892942_23893043_23893520_23893650_23893857
Isoform_70358_134	chr17	+	586	3	ISM	ENSMUSG00000023904.11	ENSMUST00000179928.2	597	4	326	-50	326	-3	3prime_fragment	FALSE	canonical	3	343	junction_1	29	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTCTCAGCAGCCTT	NA	False	NA	8	True	AATAAA	-16	NA	23892926	23894198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_23893043_23893520_23893650_23893857
Isoform_70360_16	chr17	+	930	3	NIC	ENSMUSG00000023904.11	novel	597	4	NA	NA	1	-3	intron_retention	FALSE	canonical	3	343	junction_1	29	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTCTCAGCAGCCTT	NA	False	NA	8	True	AATAAA	-16	NA	23892582	23894198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_23893043_23893520_23893650_23893857
Isoform_70362_9	chr17	+	1530	2	FSM	ENSMUSG00000023906.4	ENSMUST00000233364.2	1078	2	27	-479	27	-1	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGTGTCTGATGTCTC	NA	False	NA	4	True	AATAAA	-18	NA	23898659	23901415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23898796_23900021
Isoform_70364_553	chr17	+	1936	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	107	-3	-26	0	multi-exon	FALSE	canonical	3	384	junction_2	52.6761379583211	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTTCTTGTCCCTTTA	3045	False	NA	32	True	AAAAAG	-43	NA	23945416	23955707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_70365_42	chr17	+	2027	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	18	-5	6	0	multi-exon	TRUE	canonical	3	384	junction_2	52.6761379583211	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	2956	False	NA	34	True	AAAAAG	-45	NA	23945327	23955709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_70369_18	chr17	+	2712	6	NIC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-26	0	intron_retention	FALSE	canonical	3	384	junction_2	57.1615255219803	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTTCTTGTCCCTTTA	3045	False	NA	32	True	AAAAAG	-43	NA	23945416	23955707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_23945616_23951310_23951799_23952796_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_70371_38	chr17	+	2916	7	FSM	ENSMUSG00000023908.9	ENSMUST00000233954.2	2902	7	-8	-6	-8	0	multi-exon	FALSE	canonical	3	419	junction_2	45.7484061653154	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTTCTTGTCCCTTTA	3063	False	NA	32	True	AAAAAG	-43	NA	23945434	23955707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_23945616_23951310_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_70374_18	chr17	+	3712	5	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-26	0	intron_retention	FALSE	canonical	3	451	junction_4	39.6925685739787	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3045	False	NA	34	True	AAAAAG	-45	NA	23945416	23955709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_23945616_23951310_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_70386_28	chr17	+	8843	15	FSM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	22	-1	-12	1	multi-exon	FALSE	canonical	3	160	junction_12	24.3951316655515	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	24022182	24043711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
Isoform_70405_6	chr17	+	1254	6	FSM	ENSMUSG00000050762.6	ENSMUST00000059482.6	1253	6	-5	4	-5	-4	multi-exon	FALSE	canonical	2	6	junction_4	4.88262224629348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	4526	False	NA	NA	False	NA	NA	NA	24257112	24264924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24257336_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
Isoform_70406_13	chr17	+	6474	33	FSM	ENSMUSG00000024130.17	ENSMUST00000039013.15	6476	33	2	0	2	0	multi-exon	FALSE	canonical	3	19	junction_1	5.69230566203186	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTTTGAGTCATACAT	NA	False	NA	10	True	AATAAA	-17	NA	24570998	24629175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24571226_24576892_24576966_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
Isoform_70408_3	chr17	+	6395	32	FSM	ENSMUSG00000024130.17	ENSMUST00000079594.12	6380	32	-17	2	6	-2	multi-exon	FALSE	canonical	3	9	junction_1	6.38937724033029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTCTTTGAGTCATAC	NA	False	NA	8	True	AATAAA	-15	NA	24571002	24629173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24571226_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
Isoform_70412_632	chr17	+	1909	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	12	-1	-7	1	multi-exon	FALSE	canonical	3	410	junction_1	446.592917963328	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	925	False	NA	NA	False	AATAAA	-19	NA	24633660	24644870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_70414_94	chr17	+	1724	8	FSM	ENSMUSG00000034681.18	ENSMUST00000234977.2	1769	8	39	6	-4	0	multi-exon	FALSE	canonical	3	75	junction_2	570.995335768505	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	928	False	NA	NA	False	AATAAA	-18	NA	24633663	24644869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_70418_870	chr17	+	1787	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	24	5	-7	1	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	925	False	NA	NA	False	AATAAA	-19	NA	24633660	24644870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_70419_47	chr17	+	1825	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	-14	5	-2	1	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	887	False	NA	NA	False	AATAAA	-19	NA	24633622	24644870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_70424_319	chr17	+	1606	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	41	-1	-7	1	multi-exon	FALSE	canonical	3	629	junction_1	362.779738807019	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	925	False	NA	NA	False	AATAAA	-19	NA	24633660	24644870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_70425_62	chr17	+	1644	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	3	-1	-2	1	multi-exon	FALSE	canonical	3	629	junction_1	362.779738807019	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	887	False	NA	NA	False	AATAAA	-19	NA	24633622	24644870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_70427_73	chr17	+	2200	8	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	8	1	intron_retention	FALSE	canonical	3	495	junction_1	374.654888816743	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	940	False	NA	NA	False	AATAAA	-19	NA	24633675	24644870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_70440_130	chr17	+	1079	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	53	5	-8	-5	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTCTCTTAGCTCTTG	4893	False	NA	6	True	TATAAA	-19	NA	24645667	24658289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
Isoform_70443_9	chr17	+	1134	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	0	3	0	-3	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTCTTAGCTCTTGTG	4840	False	NA	8	True	TATAAA	-21	NA	24645614	24658291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
Isoform_70445_13	chr17	+	1189	6	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	503	junction_1	25.350345165303	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTCTTAGCTCTTGTG	4895	False	NA	8	True	TATAAA	-21	NA	24645669	24658291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
Isoform_70446_17	chr17	+	1113	6	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	-8	19	intron_retention	FALSE	canonical	3	503	junction_1	25.350345165303	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGCCACATATGTGC	4893	False	NA	13	True	NA	NA	NA	24645667	24658213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
Isoform_70451_333	chr17	+	2564	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	60	3	17	-3	multi-exon	FALSE	canonical	3	1130	junction_1	0	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTCTGCCTTCCTCTAA	NA	False	NA	22	True	ATTAAA	-19	NA	24689425	24692081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24690124_24690215
Isoform_70459_5	chr17	+	6092	20	FSM	ENSMUSG00000033597.10	ENSMUST00000024958.9	5938	20	-162	8	20	-5	multi-exon	FALSE	canonical	1	2	junction_16	3.27755736356637	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGAGCTGCTTGGCTC	7690	False	NA	NA	False	AATAAA	-7	NA	24707594	24727637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718144_24718226_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24720308_24721089_24721201_24721290_24721393_24722774_24722914_24722993_24724995_24725496_24725912_24726090
Isoform_70460_24	chr17	+	294	2	FSM	ENSMUSG00000093565.2	ENSMUST00000176921.2	298	2	3	1	3	0	multi-exon	TRUE	canonical	3	77	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTTTCAGACGTTGT	4767	False	NA	13	True	AATAAA	-16	NA	24747224	24747717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24747411_24747609
Isoform_70461_22	chr17	+	982	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234635.2	893	6	-32	-57	5	0	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	913	False	NA	10	True	AATAAA	-22	NA	24851660	24857810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24851738_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
Isoform_70463_268	chr17	+	1075	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	5	-1	5	1	multi-exon	FALSE	canonical	3	194	junction_2	26.3772629360971	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	913	False	NA	12	True	AATAAA	-24	NA	24851660	24857812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
Isoform_70464_19	chr17	+	903	5	NIC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	98.3142283700584	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	913	False	NA	11	True	AATAAA	-23	NA	24851660	24857811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24851829_24852900_24853140_24854561_24854722_24857397_24857504_24857581
Isoform_70465_18	chr17	+	2323	4	NIC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	5	-1	intron_retention	FALSE	canonical	3	202	junction_1	27.4023518860861	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCTTGGCCCGTTGGC	913	False	NA	9	True	AATAAA	-21	NA	24851660	24857809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24851829_24852900_24854722_24857397_24857504_24857581
Isoform_70468_18	chr17	+	2076	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234308.2	2084	6	7	1	5	-1	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCTTGGCCCGTTGGC	913	False	NA	9	True	AATAAA	-21	NA	24851660	24857809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24852833_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
Isoform_70469_11	chr17	+	3328	4	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	27	junction_1	106.436209377574	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	913	False	NA	10	True	AATAAA	-22	NA	24851660	24857810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24852833_24852900_24854722_24857397_24857504_24857581
Isoform_7047_97	chr10	+	1737	7	FSM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	54	669	15	-669	multi-exon	FALSE	canonical	3	82	junction_2	7.8616509433805	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACATTCCTGAGTTTGG	1823	False	NA	10	True	NA	NA	NA	79824471	79831227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
Isoform_70471_15	chr17	+	3425	11	ISM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-65	0	-5	0	intron_retention	FALSE	canonical	3	229	junction_6	149.09942991172	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1171	False	NA	12	True	AATAAA	-20	NA	24888655	24900990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
Isoform_70473_437	chr17	+	3316	12	FSM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-33	0	27	0	multi-exon	FALSE	canonical	3	229	junction_6	142.469309439723	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1203	False	NA	12	True	AATAAA	-20	NA	24888687	24900990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_70479_367	chr17	+	3325	12	FSM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	27	0	27	0	multi-exon	FALSE	canonical	3	262	junction_10	128.150802179204	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1203	False	NA	12	True	AATAAA	-20	NA	24888687	24900990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_70486_17	chr17	+	3865	11	NIC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	21	0	intron_retention	FALSE	canonical	3	229	junction_5	149.375533471851	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1197	False	NA	12	True	AATAAA	-20	NA	24888681	24900990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_70489_31	chr17	+	3867	11	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	27	-1	intron_retention	FALSE	canonical	3	262	junction_9	134.256470979987	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1203	False	NA	11	True	AATAAA	-19	NA	24888687	24900989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_70494_26	chr17	+	4198	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	19	-1	intron_retention	FALSE	canonical	3	262	junction_8	119.890485006366	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1195	False	NA	11	True	AATAAA	-19	NA	24888679	24900989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_70517_5	chr17	+	2254	9	FSM	ENSMUSG00000019320.15	ENSMUST00000019464.8	2238	9	-18	2	-18	2	multi-exon	FALSE	canonical	1	4	junction_2	2.89125837655509	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCACTGTGCACTGAGGG	NA	False	NA	NA	False	AATAAA	-19	NA	24915189	24919501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24916099_24917193_24917383_24917491_24917573_24917759_24917836_24917918_24918097_24918242_24918425_24918517_24918632_24918871_24918990_24919094
Isoform_7052_6	chr10	+	977	6	ISM	ENSMUSG00000035722.16	ENSMUST00000043866.8	6590	46	16008	-3	16008	-1	3prime_fragment	FALSE	canonical	3	34	junction_1	12.1424873893284	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGCCACGGCTGAGTTT	8561	False	NA	9	True	AATAAA	-18	NA	79849456	79851405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
Isoform_70522_9362	chr17	+	950	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	47	1	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	2855.80020309545	9362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6237	False	NA	0	True	AATAAA	-19	NA	24939083	24940899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
Isoform_70532_987	chr17	+	1090	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	0	4	0	0	multi-exon	FALSE	canonical	3	8303	junction_1	1140.19655651997	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6237	False	NA	0	True	AATAAA	-19	NA	24939083	24940899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
Isoform_7054_27	chr10	+	3899	23	FSM	ENSMUSG00000035697.15	ENSMUST00000099501.10	3948	23	49	0	-37	0	multi-exon	TRUE	canonical	1	1	junction_1	23.4611072568839	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGATCTTGTTCTTTTGC	NA	False	NA	16	True	AATAAA	-21	NA	79852535	79867306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79852753_79853613_79853939_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
Isoform_70544_9	chr17	+	1290	9	ISM	ENSMUSG00000002500.16	ENSMUST00000170239.9	1375	10	515	0	161	0	3prime_fragment	FALSE	canonical	3	9	junction_2	2.8613807855649	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTCTCTGTGTGTC	NA	False	NA	18	True	AATAAA	-18	NA	24947308	24955117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_24947484_24949842_24950012_24951309_24951446_24952282_24952470_24952557_24952719_24952890_24952993_24954390_24954487_24954695_24954816_24954973
Isoform_70545_42	chr17	+	1248	4	FSM	ENSMUSG00000075705.14	ENSMUST00000101800.7	1211	4	-31	-6	9	-1	multi-exon	FALSE	canonical	3	148	junction_3	11.8602979164381	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTGTTTGTTGTCTCAT	NA	False	NA	18	True	AATAAA	-18	NA	24955624	24961751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879
Isoform_70546_118	chr17	+	875	5	FSM	ENSMUSG00000075705.14	ENSMUST00000115262.9	886	5	9	2	9	-2	multi-exon	FALSE	canonical	3	96	junction_4	30.3685692781204	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGTGTTTGTTGTCTCA	NA	False	NA	17	True	AATAAA	-17	NA	24955624	24961750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879_24960912_24961283
Isoform_70547_7	chr17	+	1275	2	FSM	ENSMUSG00000039628.10	ENSMUST00000044922.8	1220	2	-57	2	-42	-1	multi-exon	FALSE	canonical	3	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGACTTGAAGGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	24971919	24977656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24972473_24976934
Isoform_70549_269	chr17	+	1114	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	76	1	-10	-1	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTTATGGACTCTT	NA	False	NA	10	True	AAAAAG	-23	NA	25069539	25083423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
Isoform_7055_192	chr10	+	3506	22	FSM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	-5	-2	-5	1	multi-exon	FALSE	canonical	3	46	junction_7	15.7468637773006	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCGATCTTGTTCTTTT	815	False	NA	14	True	AATAAA	-19	NA	79855481	79867304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
Isoform_70550_151	chr17	+	1148	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	42	1	42	-1	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTTATGGACTCTT	NA	False	NA	10	True	AAAAAG	-23	NA	25069505	25083423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
Isoform_70551_5	chr17	+	1239	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	-50	2	-50	-2	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGCTTATGGACTCT	NA	False	NA	9	True	AAAAAG	-22	NA	25069413	25083422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
Isoform_70554_6	chr17	+	2156	2	FSM	ENSMUSG00000046070.10	ENSMUST00000234862.2	995	2	168	-1329	168	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTGACCTAGAGTGT	7341	False	NA	8	True	ATTAAA	-15	NA	25096797	25100983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25096897_25098926
Isoform_70555_16	chr17	+	2230	2	FSM	ENSMUSG00000046070.10	ENSMUST00000234188.2	500	2	16	-1746	16	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTGACCTAGAGTGT	7748	False	NA	8	True	ATTAAA	-15	NA	25097204	25100983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25097378_25098926
Isoform_70556_79	chr17	+	2258	2	FSM	ENSMUSG00000046070.10	ENSMUST00000050714.8	2625	2	368	-1	-131	1	multi-exon	FALSE	canonical	3	22	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGACCTAGAGTGTGA	8143	False	NA	10	True	ATTAAA	-17	NA	25097599	25100985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25097799_25098926
Isoform_70557_32	chr17	+	2675	2	FSM	ENSMUSG00000046070.10	ENSMUST00000050714.8	2625	2	-50	0	-7	0	multi-exon	FALSE	canonical	3	22	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGACCTAGAGTGTG	7725	False	NA	9	True	ATTAAA	-16	NA	25097181	25100984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25097799_25098926
Isoform_7056_21	chr10	+	3530	22	FSM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	-31	0	-31	0	multi-exon	FALSE	canonical	3	46	junction_7	15.7468637773006	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCGATCTTGTTCTT	789	False	NA	12	True	AATAAA	-17	NA	79855455	79867302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
Isoform_70560_6	chr17	+	2591	2	FSM	ENSMUSG00000046070.10	ENSMUST00000234754.2	2064	2	-526	-1	16	1	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGACCTAGAGTGTGA	7748	False	NA	10	True	ATTAAA	-17	NA	25097204	25100985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25097799_25098988
Isoform_70562_167	chr17	+	1577	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	63	1	4	1	multi-exon	FALSE	canonical	3	99	junction_1	37.7388688519174	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTGTGTCTATTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	25105679	25111122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_70563_7	chr17	+	1648	6	NIC	ENSMUSG00000024160.17	novel	1641	7	NA	NA	6	-1	intron_retention	FALSE	canonical	3	99	junction_1	41.0687228922449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTGTGTCTATTG	NA	False	NA	NA	False	ATTAAA	-19	NA	25105681	25111120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25110111_25110333
Isoform_70566_32	chr17	+	1867	7	FSM	ENSMUSG00000024160.17	ENSMUST00000120943.8	1949	7	73	9	-6	3	multi-exon	FALSE	canonical	3	47	junction_1	56.1921307262463	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCAAGCTGCCTGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	25105726	25111114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_7057_4	chr10	+	3312	21	NIC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_16	20.850899261183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGCCCGATCTTGTTC	816	False	NA	10	True	AATAAA	-15	NA	79855482	79867300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
Isoform_70571_5	chr17	+	2548	6	NIC	ENSMUSG00000024160.17	novel	1947	7	NA	NA	-11	5	intron_retention	FALSE	canonical	3	176	junction_3	15.3753048750261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAAGCTGCCTGTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	25105721	25111116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_70573_365	chr17	+	888	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	30	0	11	0	multi-exon	FALSE	canonical	3	645	junction_1	12	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114119	25115263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25114463_25114635_25114679_25114761
Isoform_70579_29	chr17	+	1048	2	FSM	ENSMUSG00000038880.14	ENSMUST00000138648.2	899	2	24	-173	24	0	multi-exon	FALSE	canonical	3	669	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114132	25115263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25114679_25114761
Isoform_70580_113	chr17	+	692	5	FSM	ENSMUSG00000073435.11	ENSMUST00000024978.7	715	5	4	19	-1	19	multi-exon	FALSE	canonical	3	182	junction_1	9.82344135219425	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGCTGGTGAAGTTTCA	NA	False	NA	17	True	AATAAA	-16	NA	25115477	25116477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001_25116115_25116187
Isoform_70583_12	chr17	+	5037	30	NIC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	-15	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	15.5658243289342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGTTCTCTCAAAAGGC	6862	False	NA	10	True	AATAAA	-15	NA	25235043	25318456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25235111_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
Isoform_70584_5	chr17	+	5214	30	NIC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	15.4415779815037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAAAAGGCTGTAC	7153	False	NA	15	True	AATAAA	-20	NA	25235334	25318461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25235574_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
Isoform_70585_65	chr17	+	5477	30	FSM	ENSMUSG00000024169.17	ENSMUST00000024983.12	5489	30	12	0	4	0	multi-exon	FALSE	canonical	3	43	junction_2	11.5756314625783	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAAAAGGCTGTAC	7195	False	NA	15	True	AATAAA	-20	NA	25235376	25318461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
Isoform_70588_22	chr17	+	5775	30	FSM	ENSMUSG00000024169.17	ENSMUST00000024983.12	5489	30	-277	-9	23	1	multi-exon	FALSE	canonical	3	43	junction_2	11.5756314625783	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTGTACTTCTCTCGT	6906	False	NA	24	True	AATAAA	-29	NA	25235087	25318470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
Isoform_70592_249	chr17	+	4039	25	FSM	ENSMUSG00000036636.11	ENSMUST00000040729.9	4071	25	30	2	30	-2	multi-exon	FALSE	canonical	3	111	junction_8	12.081896466293	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTATTTTTATTTTGA	NA	False	NA	18	True	NA	NA	NA	25352394	25381076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
Isoform_70594_12	chr17	+	4865	24	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	30	0	intron_retention	FALSE	canonical	3	111	junction_7	12.1627277808041	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352394	25381072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
Isoform_70598_48	chr17	+	1934	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	36	1060	36	-1060	multi-exon	FALSE	canonical	3	314	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGTTAACGTAACTGA	NA	False	NA	6	True	AATAAA	-19	NA	25403563	25405576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25403615_25403693
Isoform_7060_6	chr10	+	1375	4	ISM	ENSMUSG00000035697.15	ENSMUST00000150022.2	2980	15	6803	-7	6803	0	3prime_fragment	FALSE	canonical	3	84	junction_1	10.6249183003395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	2693	False	NA	13	True	AATAAA	-18	NA	79864379	79867303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_79864718_79864806_79865018_79866122_79866211_79866565
Isoform_70600_17	chr17	+	3000	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	28	2	28	-2	multi-exon	FALSE	canonical	3	314	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTGTATGTCTCTCTGT	NA	False	NA	NA	False	AATATA	-14	NA	25403555	25406634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25403615_25403693
Isoform_70602_24	chr17	+	2286	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	47	697	47	-697	multi-exon	FALSE	canonical	3	314	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTGTCACAGGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	25403574	25405939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25403615_25403693
Isoform_70604_243	chr17	+	861	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	38	2131	38	-2131	multi-exon	FALSE	canonical	3	314	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTCAATTTTCTCACC	NA	False	NA	10	True	AATACA	-15	NA	25403565	25404505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25403615_25403693
Isoform_70614_39	chr17	+	4780	15	FSM	ENSMUSG00000015127.15	ENSMUST00000039734.12	4779	15	-3	2	-3	-1	multi-exon	FALSE	canonical	3	27	junction_1	11.8347464903054	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGATCTTTGG	NA	False	NA	1	True	ATTAAA	-13	NA	25407367	25453415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
Isoform_70615_20	chr17	+	4553	14	NIC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	15.8737623568248	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407367	25453416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25449180_25449384_25449494_25449750_25450685
Isoform_70616_6	chr17	+	4679	15	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.2957362646848	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	3	True	ATTAAA	-15	NA	25407367	25453417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_25407467_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
Isoform_70617_7	chr17	+	4432	14	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.5796053776771	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407385	25453416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_25407467_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25449180_25449384_25449494_25449750_25450685
Isoform_70618_8	chr17	+	3821	6	NIC	ENSMUSG00000015127.15	novel	3414	5	NA	NA	-137	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	22.1954950384081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGATCTTTGG	NA	False	NA	1	True	ATTAAA	-13	NA	25441375	25453415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25441697_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
Isoform_7062_7	chr10	+	1287	4	ISM	ENSMUSG00000035697.15	ENSMUST00000150022.2	2980	15	6890	-6	6890	0	3prime_fragment	FALSE	canonical	3	84	junction_1	10.6249183003395	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCGATCTTGTTCTT	2780	False	NA	12	True	AATAAA	-17	NA	79864466	79867302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_79864718_79864806_79865018_79866122_79866211_79866565
Isoform_70620_5	chr17	+	3510	5	FSM	ENSMUSG00000015127.15	ENSMUST00000015271.12	3414	5	-97	1	-54	-1	multi-exon	FALSE	canonical	2	5	junction_2	29.3459963197708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGATCTTTGG	NA	False	NA	1	True	ATTAAA	-13	NA	25441458	25453415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25441697_25447556_25447641_25449180_25449384_25449494_25449750_25450685
Isoform_70622_598	chr17	+	1174	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	19	-1	19	1	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGCTTTGTACGTGGC	4622	False	NA	29	True	AATAAA	-19	NA	25459162	25461773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
Isoform_70624_10	chr17	+	1575	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	16	-1	intron_retention	FALSE	canonical	3	382	junction_1	32.0702354216492	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4619	False	NA	27	True	AATAAA	-17	NA	25459159	25461771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25459339_25459417_25460232_25460661_25460836_25461132_25461197_25461427
Isoform_70625_18	chr17	+	924	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	47	-1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	185.290312752718	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4650	False	NA	27	True	AATAAA	-17	NA	25459190	25461771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25459339_25460037_25460232_25460661_25460836_25461132_25461197_25461427
Isoform_70626_9	chr17	+	1253	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	17	-1	intron_retention	FALSE	canonical	3	375	junction_1	34.4700957352892	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4620	False	NA	27	True	AATAAA	-17	NA	25459160	25461771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
Isoform_70628_17	chr17	+	1651	4	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	19	-1	intron_retention	FALSE	canonical	3	415	junction_1	23.4426012966897	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4622	False	NA	27	True	AATAAA	-17	NA	25459162	25461771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25460232_25460661_25460836_25461132_25461197_25461427
Isoform_7063_3910	chr10	+	785	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	174	0	174	0	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	3910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	829	False	NA	4	True	AATAAA	-14	NA	79889495	79892273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
Isoform_70630_3	chr17	+	1287	2	FSM	ENSMUSG00000091475.5	ENSMUST00000163493.4	1802	2	504	11	18	-2	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTGCATTTATTCCC	3236	False	NA	11	True	AATAAA	-14	NA	25789835	25794006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25790076_25792959
Isoform_70631_26	chr17	+	1834	11	FSM	ENSMUSG00000002279.20	ENSMUST00000116641.9	1858	11	24	0	2	0	multi-exon	FALSE	canonical	1	15	junction_2	37.5467708331888	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCTGTCTCTAT	NA	False	NA	107	True	NA	NA	NA	25798174	25881800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25798354_25804516_25804827_25807649_25807661_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
Isoform_70632_108	chr17	+	1731	11	FSM	ENSMUSG00000002279.20	ENSMUST00000116641.9	1858	11	24	103	2	0	multi-exon	FALSE	canonical	1	15	junction_2	37.5467708331888	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTACCTATACTGT	NA	False	NA	4	True	AATAAA	-15	NA	25798174	25881697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25798354_25804516_25804827_25807649_25807661_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
Isoform_70633_4	chr17	+	1738	10	NIC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	2	-4	combination_of_known_splicesites	TRUE	canonical	3	18	junction_2	34.0362914519556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCGCTTCTCTACCTATA	NA	False	NA	0	True	AATAAA	-11	NA	25798152	25881693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25798354_25804516_25804827_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
Isoform_70634_3	chr17	+	1418	9	FSM	ENSMUSG00000002279.20	ENSMUST00000137201.8	1424	9	6	0	-4	0	multi-exon	FALSE	canonical	3	5	junction_1	39.6917812651435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTACCTATACTGT	NA	False	NA	4	True	AATAAA	-15	NA	25798166	25881697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25798354_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
Isoform_70635_5	chr17	+	350	3	FSM	ENSMUSG00000025739.14	ENSMUST00000172002.8	719	3	53	316	53	3	multi-exon	FALSE	canonical	2	6	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTAGTCCATTCCCTGT	NA	False	NA	19	True	TATAAA	-21	NA	25936197	25938064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25936252_25937640_25937773_25937900
Isoform_70636_21	chr17	+	1755	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237785.2	1761	6	9	-3	-6	3	multi-exon	FALSE	canonical	3	14	junction_1	25.198412648419	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGTGACCATGAGCATA	NA	False	NA	21	True	AATAAA	-18	NA	25946699	25950435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25946822_25947154_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_70638_52	chr17	+	1730	6	FSM	ENSMUSG00000041199.4	ENSMUST00000047273.3	1745	6	15	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	16.0299719276111	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	24	True	AATAAA	-21	NA	25946705	25950438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25946822_25947176_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_70639_7	chr17	+	1861	5	NIC	ENSMUSG00000041199.4	novel	1745	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_1	16.0682139642214	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	24	True	AATAAA	-21	NA	25946705	25950438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25946822_25947176_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_7064_80	chr10	+	882	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	77	0	77	0	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	732	False	NA	4	True	AATAAA	-14	NA	79889398	79892273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
Isoform_70640_5	chr17	+	1678	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237183.2	1743	6	62	3	0	3	multi-exon	FALSE	canonical	2	5	junction_1	28.5096474899287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGTGACCATGAGCATA	NA	False	NA	21	True	AATAAA	-18	NA	25946705	25950435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25946822_25947225_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_70641_29	chr17	+	1539	5	FSM	ENSMUSG00000041199.4	ENSMUST00000235645.2	1531	5	2	-10	2	0	multi-exon	FALSE	canonical	3	21	junction_1	24.712092181764	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	24	True	AATAAA	-21	NA	25946707	25950438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25946822_25947496_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_70642_15	chr17	+	2202	4	NIC	ENSMUSG00000041199.4	novel	1531	5	NA	NA	7	-1	intron_retention	FALSE	canonical	3	76	junction_3	1.4142135623731	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAGAGTGACCATGAG	NA	False	NA	17	True	AATAAA	-14	NA	25946712	25950431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_70643_3	chr17	+	2516	2	NIC	ENSMUSG00000041199.4	novel	1531	5	NA	NA	11	-1	intron_retention	FALSE	canonical	3	76	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAGAGTGACCATGAG	NA	False	NA	17	True	AATAAA	-14	NA	25946716	25950431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25948144_25949342
Isoform_70646_11	chr17	+	1931	11	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	-8	47	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	76.6329563569095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTCAGTCCCCAGGAT	6940	False	NA	58	True	NA	NA	NA	25992769	26001817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000705_26000989
Isoform_70647_154	chr17	+	2021	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	19	515	-9	21	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGCCTTTCAAAGTTT	6939	False	NA	32	True	AATAAA	-44	NA	25992768	26001791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
Isoform_70648_360	chr17	+	1983	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	32	540	1	1	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATCCACTGTGTGTCTGG	6952	False	NA	7	True	AATAAA	-19	NA	25992781	26001766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
Isoform_70649_18	chr17	+	2535	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	20	0	-8	0	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTACTCAAATGACTGC	6940	False	NA	NA	False	AATAAA	-19	NA	25992769	26002306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
Isoform_7065_2248	chr10	+	808	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	151	0	151	0	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	2248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	806	False	NA	4	True	AATAAA	-14	NA	79889472	79892273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
Isoform_70653_38	chr17	+	2276	10	NIC	ENSMUSG00000002280.12	novel	2062	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	241	junction_4	18.6368809979925	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTGTCTGGTACC	6951	False	NA	11	True	AATAAA	-23	NA	25992780	26001770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661_26000820_26000989
Isoform_70654_24	chr17	+	2310	10	NIC	ENSMUSG00000002280.12	novel	2062	11	NA	NA	-8	23	intron_retention	FALSE	canonical	3	241	junction_4	18.6368809979925	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCCTTTCAAAGTTTTA	6940	False	NA	34	True	NA	NA	NA	25992769	26001793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661_26000820_26000989
Isoform_70657_23	chr17	+	3507	6	FSM	ENSMUSG00000025738.9	ENSMUST00000045692.9	3489	6	-17	-1	-17	1	multi-exon	FALSE	canonical	3	16	junction_5	4.22374241638857	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAAGTGGGTTATTA	NA	False	NA	-2	True	ATTAAA	-10	NA	26028041	26040230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26028361_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347
Isoform_70658_15	chr17	+	3547	6	FSM	ENSMUSG00000025738.9	ENSMUST00000045692.9	3489	6	-57	-1	-57	1	multi-exon	TRUE	canonical	3	16	junction_5	4.22374241638857	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAAGTGGGTTATTA	NA	False	NA	-2	True	ATTAAA	-10	NA	26028001	26040230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26028361_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347
Isoform_70661_469	chr17	+	3060	9	FSM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	33	6	11	3	multi-exon	FALSE	canonical	3	89	junction_2	16.5529453572468	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042633	26047698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
Isoform_70664_38	chr17	+	3142	8	FSM	ENSMUSG00000025737.6	ENSMUST00000160349.2	3139	8	0	-3	0	3	multi-exon	FALSE	canonical	3	89	junction_2	15.8449116277055	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042622	26047698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
Isoform_70666_6	chr17	+	3254	7	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	8	3	intron_retention	FALSE	canonical	3	89	junction_2	16.2343942158479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042630	26047698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046968_26047127_26047313_26047388
Isoform_70667_9	chr17	+	3191	8	NIC	ENSMUSG00000025737.6	novel	3099	9	NA	NA	0	3	intron_retention	FALSE	canonical	3	91	junction_4	15.4166620702328	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042622	26047698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26043661_26044627_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
Isoform_70669_24	chr17	+	3263	7	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	-1	3	intron_retention	FALSE	canonical	3	100	junction_2	13.3499895963339	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042621	26047698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26043661_26044627_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
Isoform_70671_24	chr17	+	2064	9	FSM	ENSMUSG00000025736.16	ENSMUST00000026832.14	2091	9	23	4	2	-4	multi-exon	FALSE	canonical	3	70	junction_1	9.19238815542512	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACTCTCCTGGTGGATG	NA	False	NA	13	True	NA	NA	NA	26048039	26050812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
Isoform_70672_62	chr17	+	1992	9	FSM	ENSMUSG00000025736.16	ENSMUST00000026832.14	2091	9	23	76	2	-1	multi-exon	FALSE	canonical	3	70	junction_1	9.19238815542512	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTCTGCTGGGGGA	NA	False	NA	15	True	AATAAA	-17	NA	26048039	26050740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
Isoform_70673_4	chr17	+	1115	4	ISM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	-1	10	0	-1	intron_retention	FALSE	canonical	3	348	junction_1	55.659680200303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGCTTGCTGGGAA	7194	False	NA	29	True	AATAAA	-30	NA	26094473	26096133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468
Isoform_70675_77	chr17	+	1021	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	-1	6	0	3	multi-exon	FALSE	canonical	3	348	junction_1	48.8287824955732	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGCTGGGAATACC	7194	False	NA	33	True	AATAAA	-34	NA	26094473	26096137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
Isoform_70677_220	chr17	+	795	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	442	6	-14	3	multi-exon	FALSE	canonical	3	287	junction_5	67.7542618585724	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGCTGGGAATACC	7210	False	NA	33	True	AATAAA	-34	NA	26094489	26096137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
Isoform_70680_8	chr17	+	838	4	FSM	ENSMUSG00000025731.17	ENSMUST00000110456.3	891	4	52	1	-14	-1	multi-exon	FALSE	canonical	3	16	junction_1	203.922098415601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGCTTGCTGGGAA	7210	False	NA	29	True	AATAAA	-30	NA	26094489	26096133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26094701_26095193_26095254_26095468_26095537_26095634
Isoform_70684_276	chr17	+	3441	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	16	7	-11	-2	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAATGAGTGGTCTTTT	NA	False	NA	13	True	NA	NA	NA	26332305	26342221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
Isoform_70686_144	chr17	+	2580	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	-23	907	-6	0	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGGCTTCTTTCTCCAG	NA	False	NA	12	True	AATAAA	-13	NA	26332266	26341321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
Isoform_70687_285	chr17	+	2541	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	16	907	-11	0	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGGCTTCTTTCTCCAG	NA	False	NA	12	True	AATAAA	-13	NA	26332305	26341321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
Isoform_70690_21	chr17	+	2392	13	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	107.829694683587	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGGCTTCTTTCTCCAG	NA	False	NA	12	True	AATAAA	-13	NA	26332305	26341321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26341060
Isoform_70691_13	chr17	+	3296	13	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	107.829694683587	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332305	26342225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26341060
Isoform_70698_1625	chr17	+	1022	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	45	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGAGTCCTGTGAGTT	NA	False	NA	20	True	AGTAAA	-20	NA	26342518	26345586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
Isoform_70702_24	chr17	+	1022	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	-21	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_2	671.536670629386	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGAGTCCTGTGAGTT	NA	False	NA	20	True	AGTAAA	-20	NA	26342496	26345586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
Isoform_70704_21	chr17	+	1004	5	NIC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	597.959603568669	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	False	NA	19	True	AGTAAA	-19	NA	26342545	26345585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26342824_26343529_26343693_26344230_26344366_26344451_26344539_26345244
Isoform_70705_25	chr17	+	1589	4	NIC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	5	-2	intron_retention	FALSE	canonical	3	1395	junction_2	20.2703943940144	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	False	NA	19	True	AGTAAA	-19	NA	26342498	26345585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26342824_26343529_26344366_26344451_26344539_26345244
Isoform_70710_356	chr17	+	3769	11	FSM	ENSMUSG00000024182.18	ENSMUST00000074370.11	3777	11	7	1	7	-1	multi-exon	FALSE	canonical	3	153	junction_9	74.468852549237	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357668	26414784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
Isoform_70713_435	chr17	+	3661	10	FSM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	-255	-516	7	-1	multi-exon	FALSE	canonical	3	227	junction_8	47.4952889151735	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357668	26414784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
Isoform_70716_10	chr17	+	2811	10	NIC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	6	-1	intron_retention	FALSE	canonical	2	25	junction_1	113.762368748237	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357667	26414784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26358016_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
Isoform_70727_122	chr17	+	1713	10	FSM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	-54	13	-6	-9	multi-exon	FALSE	canonical	3	95	junction_2	196.74976273379	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTTATTATATGTTT	NA	False	NA	4	True	ATTAAA	-16	NA	26471918	26499684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
Isoform_70728_23	chr17	+	5007	11	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	204.37027670383	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGGTGTTTTGTCACT	NA	False	NA	21	True	NA	NA	NA	26471926	26504482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
Isoform_70734_157	chr17	+	2709	9	FSM	ENSMUSG00000024188.17	ENSMUST00000133032.8	2670	9	-39	0	-6	0	multi-exon	FALSE	canonical	3	162	junction_1	146.829354609356	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471918	26499694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
Isoform_70742_350	chr17	+	1652	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	49	-1	-6	0	multi-exon	FALSE	canonical	3	393	junction_1	74.6521098161331	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471918	26499694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
Isoform_70744_182	chr17	+	4942	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-6	-2	-6	2	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCAGGTGTTTTGTCA	NA	False	NA	19	True	NA	NA	NA	26471918	26504480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
Isoform_70749_87	chr17	+	3613	8	NIC	ENSMUSG00000024188.17	novel	2670	9	NA	NA	27	0	intron_retention	FALSE	canonical	3	531	junction_1	36.4159642049966	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471896	26499694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
Isoform_70762_12	chr17	+	2850	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGCTGTGACTCTGCC	NA	False	NA	12	True	ATTAAA	-16	NA	26780494	26875906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
Isoform_70763_26	chr17	+	1265	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCACGTGTCTCTTTCCC	NA	False	NA	12	True	GATAAA	-14	NA	26780497	26874324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
Isoform_70765_356	chr17	+	2720	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	35	-1	6	1	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGCTGTGACTCTGCC	NA	False	NA	12	True	ATTAAA	-16	NA	26780497	26875906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
Isoform_70768_52	chr17	+	2765	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	-12	1	-12	-1	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATTGCTGTGACTCTG	NA	False	NA	10	True	ATTAAA	-14	NA	26780450	26875904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
Isoform_70775_928	chr17	+	744	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	77	2	35	-2	multi-exon	FALSE	canonical	3	1134	junction_3	173.829418300432	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTCCAGTGTTTAA	NA	False	NA	35	True	AATAAA	-23	NA	26895420	26918619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
Isoform_70776_243	chr17	+	757	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_3	528.401993435553	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTCCAGTGTTTAA	NA	False	NA	35	True	AATAAA	-23	NA	26895391	26918619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_26895553_26901651_26901700_26914328_26914443_26918185
Isoform_70778_18	chr17	+	7442	9	FSM	ENSMUSG00000048249.15	ENSMUST00000062519.14	7462	9	5	15	0	-15	multi-exon	FALSE	canonical	3	21	junction_1	7.89679523604354	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGGTTTTGAATTG	1285	False	NA	NA	False	AATAAA	-9	NA	26934628	26995594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
Isoform_70780_4	chr17	+	6040	6	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	13.5114766032436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGAATTGTTTGCCTC	1284	False	NA	NA	False	AATAAA	-17	NA	26934627	26995602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26934749_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
Isoform_70782_3	chr17	+	1124	7	FSM	ENSMUSG00000024191.16	ENSMUST00000134344.8	1087	7	-40	3	-1	-3	multi-exon	FALSE	canonical	1	1	junction_4	44.5374374356376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAGAGTGGTAAATGCT	2009	False	NA	11	True	AATAAA	-11	NA	27000054	27011491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27008893_27008939_27009899_27010019_27010914
Isoform_70783_186	chr17	+	1079	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	18	1	2	0	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAGTGGTAAATGCTTAA	2012	False	NA	14	True	AATAAA	-14	NA	27000057	27011494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
Isoform_70784_12	chr17	+	1258	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	-163	3	-163	-2	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGAGTGGTAAATGCTT	1831	False	NA	12	True	AATAAA	-12	NA	26999876	27011492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
Isoform_70785_5	chr17	+	985	5	FSM	ENSMUSG00000024191.16	ENSMUST00000137989.2	818	5	-74	-93	2	-2	multi-exon	FALSE	canonical	2	4	junction_2	37.8615900352851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGAGTGGTAAATGCTT	2012	False	NA	12	True	AATAAA	-12	NA	27000057	27011492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27000151_27002418_27002512_27008668_27008771_27009899_27010019_27010914
Isoform_70786_16	chr17	+	810	3	FSM	ENSMUSG00000024301.11	ENSMUST00000236476.2	819	3	10	-1	10	1	multi-exon	FALSE	canonical	3	106	junction_1	42	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	27136074	27140483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27136260_27139770_27139906_27139993
Isoform_70787_145	chr17	+	2326	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	10	295	10	-295	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTTCTTAATCTTAGA	NA	False	NA	8	True	AATAAA	-21	NA	27136074	27151262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
Isoform_70789_19	chr17	+	2619	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	10	2	10	-2	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCCATTGTGATGTGTT	NA	False	NA	6	True	AATAAA	-18	NA	27136074	27151555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
Isoform_70792_26	chr17	+	2270	10	NIC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	11	-296	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	138.283926920103	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTTCTTAATCTTAG	NA	False	NA	7	True	AATAAA	-20	NA	27136075	27151261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_27136260_27139770_27139906_27139993_27140094_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
Isoform_70793_3	chr17	+	2561	10	NIC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	10	-6	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	138.283926920103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATGTCCATTGTGATG	NA	False	NA	2	True	AATAAA	-14	NA	27136074	27151551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_27136260_27139770_27139906_27139993_27140094_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
Isoform_70796_15	chr17	+	2493	15	FSM	ENSMUSG00000024193.9	ENSMUST00000073724.7	2522	15	32	-3	32	3	multi-exon	TRUE	canonical	2	7	junction_11	6.30718734816859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGACAAGAGGCGCTC	NA	False	NA	25	True	AATAAA	-35	NA	27152057	27156885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155744_27155840_27156027_27156109_27156253
Isoform_70797_6	chr17	+	2580	14	FSM	ENSMUSG00000024193.9	ENSMUST00000237189.2	2526	14	-54	0	-36	0	multi-exon	FALSE	canonical	3	8	junction_1	5.73992557113158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGGCATGAGTCATTTT	NA	False	NA	3	True	AATAAA	-13	NA	27152068	27156863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155655_27155744_27155840_27156027_27156109_27156253
Isoform_70798_189	chr17	+	2759	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	31	6	-19	-6	multi-exon	FALSE	canonical	3	46	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGACAGTAGACTGGCTT	NA	False	NA	10	True	AATAAA	-18	NA	27192171	27195171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27192289_27192529
Isoform_70801_11	chr17	+	3872	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	31	-1107	-19	1107	multi-exon	FALSE	canonical	3	46	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTGTCTTGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27192171	27196284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27192289_27192529
Isoform_70803_20	chr17	+	386	2	FSM	ENSMUSG00000048731.16	ENSMUST00000142141.3	451	2	65	0	-10	0	multi-exon	FALSE	canonical	3	59	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTAGCGCCGGTTAATA	NA	False	NA	22	True	AGTAAA	-14	NA	27237025	27241491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27237145_27241224
Isoform_70804_12	chr17	+	420	2	FSM	ENSMUSG00000048731.16	ENSMUST00000142141.3	451	2	31	0	5	0	multi-exon	FALSE	canonical	3	59	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTAGCGCCGGTTAATA	NA	False	NA	22	True	AGTAAA	-14	NA	27236991	27241491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27237145_27241224
Isoform_70805_12	chr17	+	2305	9	NIC	ENSMUSG00000048731.16	novel	1138	7	NA	NA	16	0	intron_retention	FALSE	canonical	2	3	junction_2	17.8321163914999	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGCTGTCTGTCCC	NA	False	NA	18	True	AATAAA	-19	NA	27237002	27255351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_27237145_27241224_27241315_27244310_27244434_27247806_27248921_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
Isoform_70806_6	chr17	+	2350	10	NNC	ENSMUSG00000048731.16	novel	1138	7	NA	NA	-10	-7	intron_retention	FALSE	canonical	0	0	junction_2	17.870591056016	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCACCTCCTGGGCTGT	NA	False	NA	11	True	AATAAA	-12	NA	27237025	27255344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_27237145_27241224_27241315_27242102_27242178_27244310_27244434_27247806_27248921_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
Isoform_70807_3	chr17	+	1078	7	FSM	ENSMUSG00000048731.16	ENSMUST00000122106.9	1138	7	59	1	-10	0	multi-exon	FALSE	canonical	2	5	junction_2	8.62972897733308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGCTGTCTGTCCC	NA	False	NA	18	True	AATAAA	-19	NA	27237025	27255351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27237145_27244310_27244434_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
Isoform_70808_4	chr17	+	955	6	NIC	ENSMUSG00000048731.16	novel	1138	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	9.84682690007294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGCTGTCTGTCCC	NA	False	NA	18	True	AATAAA	-19	NA	27237025	27255351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_27237145_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
Isoform_70809_3	chr17	+	2370	16	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	15	27039	15	-12165	5prime_fragment	FALSE	canonical	3	88	junction_10	11.3576210341583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCATGGTGTATCGCTTC	NA	False	NA	NA	False	NA	NA	NA	27276292	27314158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768
Isoform_70810_73	chr17	+	8973	58	FSM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	16	1	16	-1	multi-exon	TRUE	canonical	0	0	junction_18	48.4846455023872	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27276293	27341196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
Isoform_70847_46	chr17	+	1678	6	FSM	ENSMUSG00000046711.17	ENSMUST00000231825.2	1717	6	38	1	0	0	multi-exon	FALSE	canonical	3	168	junction_1	2331.48484876055	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	27775626	27782642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775686_27775925_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
Isoform_7085_55	chr10	+	2103	9	ISM	ENSMUSG00000003068.18	ENSMUST00000144883.8	3663	11	2	1906	2	364	5prime_fragment	FALSE	canonical	2	5	junction_8	26.3506997060799	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGGTGGATGCTTGCC	2649	False	NA	NA	False	CATAAA	-16	NA	79951638	79964397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964224
Isoform_70850_37	chr17	+	1752	6	FSM	ENSMUSG00000046711.17	ENSMUST00000118599.9	1045	6	117	-824	0	0	multi-exon	FALSE	canonical	3	168	junction_1	2332.99755679255	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775587	27782644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775686_27775925_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_70851_51	chr17	+	1709	6	FSM	ENSMUSG00000046711.17	ENSMUST00000118599.9	1045	6	156	-820	0	-1	multi-exon	FALSE	canonical	3	168	junction_1	2332.99755679255	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTCTCTGGTGTAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	27775626	27782640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775686_27775925_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_70853_159	chr17	+	1591	5	FSM	ENSMUSG00000046711.17	ENSMUST00000114888.11	1631	5	42	-2	-5	0	multi-exon	FALSE	canonical	3	2165	junction_2	1373.00680533638	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775600	27782644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781411
Isoform_70857_302	chr17	+	1623	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	53	5	-5	0	multi-exon	FALSE	canonical	3	3635	junction_2	873.596123789477	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775600	27782643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_70863_26	chr17	+	1751	6	NIC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	2362.29292002495	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775626	27782644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_27775724_27775925_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_70865_295	chr17	+	1603	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	12	-698	0	0	multi-exon	FALSE	canonical	3	1035	junction_1	1979.76797882984	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775626	27782644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781411
Isoform_70866_77	chr17	+	1628	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	-14	-697	-5	0	multi-exon	FALSE	canonical	3	1035	junction_1	1979.76797882984	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775600	27782643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781411
Isoform_70869_27	chr17	+	1601	5	NIC	ENSMUSG00000046711.17	novel	1595	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	289	junction_4	2070.90322987338	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775626	27782645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781414
Isoform_70872_106	chr17	+	1662	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	13	-645	-5	0	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775600	27782644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_70874_555	chr17	+	1635	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	39	-644	0	0	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775626	27782643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_70875_25	chr17	+	1632	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232253.2	600	5	12	-1044	0	0	multi-exon	FALSE	canonical	3	289	junction_4	2144.39797787164	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775626	27782643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781414
Isoform_70877_32	chr17	+	1919	5	FSM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	-15	-6	0	0	multi-exon	FALSE	canonical	3	442	junction_1	2173.91908485574	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775626	27782643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
Isoform_70879_75	chr17	+	1997	5	FSM	ENSMUSG00000046711.17	ENSMUST00000231874.2	2001	5	4	0	4	0	multi-exon	FALSE	canonical	3	442	junction_1	2057.89800221002	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775581	27782643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_70881_77	chr17	+	1952	5	FSM	ENSMUSG00000046711.17	ENSMUST00000231874.2	2001	5	49	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	2057.89800221002	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775626	27782643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_70885_4	chr17	+	1704	10	FSM	ENSMUSG00000040276.16	ENSMUST00000231669.2	4209	10	47	2458	1	-3	multi-exon	TRUE	canonical	1	1	junction_1	19.4193488848393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAGAACAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-6	NA	27904201	27927627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_27904400_27920799_27920916_27921673_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
Isoform_70886_41	chr17	+	1408	8	ISM	ENSMUSG00000040276.16	ENSMUST00000097360.3	1800	10	17495	-4	-1765	4	3prime_fragment	FALSE	canonical	3	26	junction_1	11.2866184086307	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	TTTAAA	-16	NA	27921665	27927637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
Isoform_70888_6	chr17	+	877	5	ISM	ENSMUSG00000040276.16	ENSMUST00000231350.2	1368	8	1458	5	266	-5	3prime_fragment	FALSE	canonical	3	43	junction_3	6.05702071979286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGACAGCGTTTGCAGC	NA	False	NA	NA	False	TTTAAA	-40	NA	27924888	27927661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
Isoform_70890_1530	chr17	+	729	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	28	1	-20	1	multi-exon	FALSE	canonical	3	1664	junction_1	167.935225607971	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGTGTCCCTGTCCCT	NA	False	NA	17	True	AATAAA	-19	NA	28059088	28070938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
Isoform_70891_316	chr17	+	766	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	-7	-1	-4	1	multi-exon	FALSE	canonical	3	1664	junction_1	167.935225607971	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTGTCCCTGTCCCTTG	NA	False	NA	19	True	AATAAA	-21	NA	28059053	28070940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
Isoform_70897_56	chr17	+	8579	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	54	1	54	-1	multi-exon	FALSE	canonical	3	66	junction_6	13.1601671721905	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCCTCGTGTGTCTGT	5839	False	NA	NA	False	ATTAAA	-15	NA	28075468	28119014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
Isoform_70898_3	chr17	+	4840	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	14	3780	14	895	multi-exon	TRUE	canonical	3	66	junction_6	13.1601671721905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGCTTCACGGCAGTG	5799	False	NA	-49	True	NA	NA	NA	28075428	28115235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
Isoform_7090_1135	chr10	+	2368	10	FSM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	-14	212	-14	0	multi-exon	FALSE	canonical	3	36	junction_1	19.2898617266195	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTATGAGGGTGTT	2633	False	NA	20	True	AATAAA	-15	NA	79951622	79966304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
Isoform_70900_4	chr17	+	8892	20	NIC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	50	0	intron_retention	FALSE	canonical	3	66	junction_6	13.4847816141032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	5835	False	NA	NA	False	ATTAAA	-16	NA	28075464	28119015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
Isoform_70904_3	chr17	+	5746	26	NIC	ENSMUSG00000024219.17	novel	6846	25	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	15.1100496359211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTTTGAATTATAAACA	4238	False	NA	17	True	CATAAA	-18	NA	28128278	28281576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
Isoform_70908_4	chr17	+	1345	7	ISM	ENSMUSG00000024219.17	ENSMUST00000088027.7	6838	24	24	75529	8	10239	5prime_fragment	FALSE	canonical	3	39	junction_4	6.71854812358212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATTCCAGCACTTGAA	4274	False	NA	NA	False	ATTAAA	-18	NA	28128314	28206044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718
Isoform_7091_626	chr10	+	2575	10	FSM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	-5	-4	-5	4	multi-exon	FALSE	canonical	3	36	junction_1	19.2898617266195	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTGTTCTGTCCGTT	2642	False	NA	24	True	AATAAA	-28	NA	79951631	79966520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
Isoform_70910_8	chr17	+	5822	25	NIC	ENSMUSG00000024219.17	novel	5819	25	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	11.2395012740285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4272	False	NA	12	True	AATAAA	-21	NA	28128312	28281749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
Isoform_70911_19	chr17	+	5623	24	FSM	ENSMUSG00000024219.17	ENSMUST00000233525.2	5717	24	-32	126	-5	38	multi-exon	FALSE	canonical	3	31	junction_22	7.82125454670221	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACCAACCTGTGCATCA	4234	False	NA	52	True	TATAAA	-18	NA	28128274	28281611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
Isoform_70912_8	chr17	+	5730	24	FSM	ENSMUSG00000024219.17	ENSMUST00000233525.2	5717	24	-1	-12	-1	0	multi-exon	FALSE	canonical	3	31	junction_22	7.82125454670221	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4265	False	NA	12	True	AATAAA	-21	NA	28128305	28281749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
Isoform_70914_4	chr17	+	3353	23	FSM	ENSMUSG00000038677.15	ENSMUST00000137147.9	3822	23	-215	684	-7	-489	multi-exon	FALSE	canonical	3	10	junction_6	8.92716163604273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCAGGCGCTCTCCCTTTC	NA	False	NA	2	True	AAGAAA	-30	NA	28361284	28390427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
Isoform_70915_3	chr17	+	3313	22	NIC	ENSMUSG00000038677.15	novel	3822	23	NA	NA	-7	-367	combination_of_known_junctions	FALSE	canonical	2	7	junction_16	10.2313377477651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCGTTATAGCATGGTGC	NA	False	NA	NA	False	AATAGA	-15	NA	28361284	28390549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
Isoform_70916_12	chr17	+	3346	22	FSM	ENSMUSG00000038677.15	ENSMUST00000043503.11	6876	22	131	3399	-46	-487	multi-exon	TRUE	canonical	3	23	junction_15	6.58693821908486	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCGCTCTCCCTTTCGG	NA	False	NA	4	True	AAGAAA	-32	NA	28361245	28390429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
Isoform_70918_4	chr17	+	3432	22	FSM	ENSMUSG00000038677.15	ENSMUST00000043503.11	6876	22	170	3274	-7	-362	multi-exon	FALSE	canonical	3	23	junction_15	6.58693821908486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATAGCATGGTGCCTTGC	NA	False	NA	NA	False	AATAGA	-20	NA	28361284	28390554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
Isoform_70919_3	chr17	+	6717	22	FSM	ENSMUSG00000038677.15	ENSMUST00000043503.11	6876	22	148	11	-29	-11	multi-exon	FALSE	canonical	3	23	junction_15	6.58693821908486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTCCGAGGTCTAGCA	NA	False	NA	NA	False	ATTAAA	-9	NA	28361262	28393817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
Isoform_70920_4	chr17	+	2683	14	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.9854492379845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28396172	28424859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28396390_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_70921_19	chr17	+	2598	14	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	21.8653761585803	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	False	NA	4	True	AATAAA	-16	NA	28396391	28424860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416724_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_70922_69	chr17	+	2844	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	18	2	-16	0	multi-exon	FALSE	canonical	3	64	junction_10	10.6092512939298	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGCTCCTCCATCAT	NA	False	NA	2	True	AATAAA	-14	NA	28396120	28424858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_70923_185	chr17	+	2573	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	289	2	0	0	multi-exon	FALSE	canonical	3	64	junction_10	10.6092512939298	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGCTCCTCCATCAT	NA	False	NA	2	True	AATAAA	-14	NA	28396391	28424858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_70927_7	chr17	+	2352	13	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	22.220486043289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTGGGCTCCTCCATC	NA	False	NA	0	True	AATAAA	-12	NA	28396376	28424856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_70928_7	chr17	+	2612	13	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	22.220486043289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGGGCTCCTCCATCA	NA	False	NA	1	True	AATAAA	-13	NA	28396117	28424857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_70929_7	chr17	+	3249	13	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	64	junction_9	9.71646655025489	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	False	NA	4	True	AATAAA	-16	NA	28396391	28424860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_70931_10	chr17	+	2262	11	NIC	ENSMUSG00000002257.9	novel	2277	11	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	42.568650436677	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTCCTGCCCTTCCCT	NA	False	NA	12	True	AATAAA	-17	NA	28426804	28447577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28426913_28435895_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
Isoform_70932_553	chr17	+	2241	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	30	6	5	-6	multi-exon	FALSE	canonical	3	110	junction_2	14.7461859475595	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCTCCTGCCCTTCCC	NA	False	NA	11	True	AATAAA	-16	NA	28426781	28447576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
Isoform_70939_10	chr17	+	3200	8	FSM	ENSMUSG00000002250.17	ENSMUST00000002320.16	3277	8	75	2	1	-2	multi-exon	FALSE	canonical	2	4	junction_5	2.32115382989599	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTAGCCATCTGAGTT	NA	False	NA	24	True	AATAAA	-24	NA	28451748	28520446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28451839_28455985_28456070_28505234_28505442_28514314_28514470_28516059_28516199_28517250_28517454_28517557_28518009_28518575
Isoform_70940_8	chr17	+	2589	2	ISM	ENSMUSG00000007570.17	ENSMUST00000114801.9	1825	8	1	8740	1	-441	intron_retention	FALSE	canonical	3	142	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACTGAAAAAAAAAAT	311	False	NA	NA	False	NA	NA	NA	28532497	28536802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_28532857_28534572
Isoform_70942_10	chr17	+	2170	11	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	56.7912845426127	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	310	False	NA	13	True	AATAAA	-15	NA	28532496	28545542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28542544_28542640_28545067
Isoform_70943_17	chr17	+	2113	11	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	55.0784894491488	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	307	False	NA	11	True	AATAAA	-13	NA	28532493	28545540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28542544_28542640_28545125
Isoform_70945_44	chr17	+	2046	10	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	40.6086410557539	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	339	False	NA	13	True	AATAAA	-15	NA	28532525	28545542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
Isoform_70946_135	chr17	+	2013	10	FSM	ENSMUSG00000007570.17	ENSMUST00000114803.9	2025	10	8	4	4	0	multi-exon	FALSE	canonical	3	100	junction_4	20.9655802580218	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	314	False	NA	13	True	AATAAA	-15	NA	28532500	28545542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
Isoform_70949_12	chr17	+	1848	9	FSM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	-8	2	-2	0	multi-exon	FALSE	canonical	3	8	junction_8	47.2385898921634	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	351	False	NA	11	True	AATAAA	-13	NA	28532537	28545540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28545125
Isoform_70950_6	chr17	+	2031	10	FSM	ENSMUSG00000007570.17	ENSMUST00000233381.2	1774	10	-260	3	-9	0	multi-exon	FALSE	canonical	3	26	junction_9	49.8013337121223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	325	False	NA	13	True	AATAAA	-15	NA	28532511	28545542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
Isoform_70951_32	chr17	+	1936	10	FSM	ENSMUSG00000007570.17	ENSMUST00000088007.12	1942	10	6	0	1	0	multi-exon	FALSE	canonical	3	32	junction_5	38.9558154266543	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	360	False	NA	11	True	AATAAA	-13	NA	28532546	28545540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
Isoform_70952_6	chr17	+	2046	10	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	61.345610687459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	310	False	NA	13	True	AATAAA	-15	NA	28532496	28545542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28542544_28542640_28545125
Isoform_70953_11	chr17	+	2007	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	49.7543967906355	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	310	False	NA	11	True	AATAAA	-13	NA	28532496	28545540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
Isoform_70954_65	chr17	+	1926	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	35.076478942448	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	339	False	NA	17	True	AATAAA	-19	NA	28532525	28545546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
Isoform_70957_17	chr17	+	1902	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	48.2720157026822	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	334	False	NA	17	True	AATAAA	-19	NA	28532520	28545546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
Isoform_70963_6364	chr17	+	717	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	112	1	0	0	multi-exon	FALSE	canonical	3	5482	junction_4	1458.64553610533	6364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
Isoform_70964_128	chr17	+	747	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	82	1	-15	0	multi-exon	FALSE	canonical	3	5482	junction_4	1458.64553610533	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547526	28550006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
Isoform_70968_582	chr17	+	950	6	FSM	ENSMUSG00000037805.16	ENSMUST00000129935.8	949	6	-1	0	0	0	multi-exon	FALSE	canonical	3	728	junction_3	2914.49848859113	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28548497_28549498_28549672_28549803
Isoform_70971_238	chr17	+	1043	5	FSM	ENSMUSG00000037805.16	ENSMUST00000150103.3	1022	5	-17	-4	0	0	multi-exon	FALSE	canonical	3	5482	junction_3	1550.72344004339	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28547593_28547784_28547860_28547940_28548497_28549498_28549672_28549803
Isoform_71_3116	ERCC-00046	+	505	1	FSM	ERCC-00046A	DQ516748	506	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00046_+_0_500
Isoform_71002_3	chr17	+	1168	4	FSM	ENSMUSG00000062252.10	ENSMUST00000080780.8	1313	4	68	77	-39	-77	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTTCTTTATCGTCTT	8632	False	NA	NA	False	NA	NA	NA	28794694	28802490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28795387_28798904_28799142_28801953_28802000_28802297
Isoform_71004_12	chr17	+	1521	11	ISM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	85	3056	-13	288	5prime_fragment	FALSE	canonical	3	310	junction_9	34.6842903920492	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCGTTTATGTAATATT	5162	False	NA	NA	False	NA	NA	NA	28910400	28964323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956
Isoform_71005_668	chr17	+	3461	12	FSM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	86	1	-12	0	multi-exon	FALSE	canonical	3	310	junction_9	36.7805643969117	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	5163	False	NA	11	True	AATAAA	-18	NA	28910401	28967378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
Isoform_71007_93	chr17	+	3558	12	FSM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	-11	1	2	0	multi-exon	FALSE	canonical	3	310	junction_9	36.7805643969117	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	5066	False	NA	11	True	AATAAA	-18	NA	28910304	28967378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
Isoform_71012_41	chr17	+	3456	12	FSM	ENSMUSG00000053436.16	ENSMUST00000004990.14	3562	12	105	1	-6	0	multi-exon	FALSE	canonical	3	53	junction_9	126.485422019579	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5169	False	NA	12	True	AATAAA	-19	NA	28910407	28967379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964131_28965244
Isoform_71013_40	chr17	+	3482	12	FSM	ENSMUSG00000053436.16	ENSMUST00000004990.14	3562	12	78	2	-33	0	multi-exon	FALSE	canonical	3	53	junction_9	126.485422019579	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	5142	False	NA	11	True	AATAAA	-18	NA	28910380	28967378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964131_28965244
Isoform_71021_59	chr17	+	1392	12	FSM	ENSMUSG00000004864.14	ENSMUST00000233984.2	2937	12	14	1531	14	198	multi-exon	FALSE	canonical	3	65	junction_6	12.7227264607489	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGCCCCTTTTCTG	NA	False	NA	10	True	NA	NA	NA	28988284	28997676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995157_28995275_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
Isoform_71022_22	chr17	+	1483	11	NIC	ENSMUSG00000004864.14	novel	2937	12	NA	NA	3	198	intron_retention	FALSE	canonical	3	77	junction_10	10.3580886267689	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGCCCCTTTTCTG	NA	False	NA	10	True	NA	NA	NA	28988312	28997676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
Isoform_71023_7	chr17	+	2409	2	ISM	ENSMUSG00000063952.17	ENSMUST00000233646.2	4497	11	-231	30253	36	1793	5prime_fragment	FALSE	canonical	3	34	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29020099	29027075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_29020336_29024902
Isoform_71036_135	chr17	+	4007	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	189	0	-5	0	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171420	29188523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
Isoform_71038_630	chr17	+	3821	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	30	2	0	-2	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTTGTTATTTAATAG	NA	False	NA	NA	False	AATAAA	-14	NA	29171425	29188521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
Isoform_7105_25	chr10	+	2226	9	NIC	ENSMUSG00000003068.18	novel	2566	10	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	28.8952850825182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTATGAGGGTGTT	2642	False	NA	20	True	AATAAA	-15	NA	79951631	79966304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_79952742_79960635_79960720_79961312_79961403_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
Isoform_71060_46	chr17	+	1757	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	42	795	1	-8	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACTTGAAAGCCTGTT	NA	False	NA	29	True	ATTAAA	-20	NA	29251647	29261076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
Isoform_71067_95	chr17	+	2565	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	8	0	-8	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTGGGTTGGAGTATA	NA	False	NA	10	True	ATTAAA	-12	NA	29251646	29262339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
Isoform_71072_1650	chr17	+	1306	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	46	1266	1	-3	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAAGCCTGTTTTTCC	NA	False	NA	34	True	ATTAAA	-25	NA	29251647	29261081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
Isoform_71101_6	chr17	+	1195	3	FSM	ENSMUSG00000117007.2	ENSMUST00000233006.2	1125	3	-63	-7	-63	-3	multi-exon	FALSE	canonical	1	3	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCAGACTGGTAAGC	1546	False	NA	NA	False	NA	NA	NA	29275770	29278726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29275960_29276834_29276933_29277818
Isoform_71103_69	chr17	+	1932	3	FSM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	11	-1021	11	0	multi-exon	FALSE	canonical	3	83	junction_1	538	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	1868	False	NA	24	True	NA	NA	NA	29309963	29319696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29310076_29317370_29317812_29318317
Isoform_71104_48	chr17	+	2414	2	ISM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	5	0	5	0	intron_retention	FALSE	canonical	3	1306	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4652	False	NA	24	True	NA	NA	NA	29312747	29319696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_29312836_29317370
Isoform_71106_1543	chr17	+	1908	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	5	0	5	0	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4652	False	NA	24	True	NA	NA	NA	29312747	29319696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29312836_29317370_29317812_29318317
Isoform_71115_3	chr17	+	2879	8	FSM	ENSMUSG00000064147.8	ENSMUST00000233860.2	4105	8	1230	-4	-52	0	multi-exon	TRUE	canonical	0	0	junction_1	2.35606035749581	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGTGTCAACTCTGAAG	7236	False	NA	NA	False	AATAAA	-14	NA	29355259	29367954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29355337_29356952_29357147_29358088_29359525_29363462_29363545_29364220_29364336_29364914_29365017_29366321_29366399_29367158
Isoform_71117_45	chr17	+	1338	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	109	1365	-19	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	420	False	NA	15	True	AATAAA	-16	NA	29487870	29520499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_71118_240	chr17	+	1288	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	159	1365	-1	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	470	False	NA	15	True	AATAAA	-16	NA	29487920	29520499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_71119_24	chr17	+	1432	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	15	1365	15	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	326	False	NA	15	True	AATAAA	-16	NA	29487776	29520499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_71120_5	chr17	+	2682	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	130	0	2	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTACCTTCTTACTGG	441	False	NA	18	True	NA	NA	NA	29487891	29521864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_71121_18	chr17	+	1286	9	NNC	ENSMUSG00000052712.18	novel	2812	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	118.386813032533	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	470	False	NA	15	True	AATAAA	-16	NA	29487920	29520499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515535_29515664_29517615_29517740_29520329
Isoform_71122_5	chr17	+	1242	9	NIC	ENSMUSG00000052712.18	novel	2812	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	115.980332384418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTTGGTTGCTTAGTT	467	False	NA	17	True	AATAAA	-18	NA	29487917	29520501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_29487977_29496830_29496922_29501033_29501242_29501702_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_71126_12	chr17	+	866	7	NIC	ENSMUSG00000052712.18	novel	1073	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	129.043920171906	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	470	False	NA	15	True	AATAAA	-16	NA	29487920	29520499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_29487977_29496830_29496922_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_71127_22	chr17	+	1183	8	FSM	ENSMUSG00000052712.18	ENSMUST00000234711.2	13859	8	136	12540	0	0	multi-exon	FALSE	canonical	3	31	junction_1	113.402479906656	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	484	False	NA	15	True	AATAAA	-16	NA	29487934	29520499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29487977_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_71133_4613	chr17	+	2652	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	43	3	43	1	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	4613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGAGTTTTCCATTC	NA	False	NA	14	True	AATAAA	-15	NA	29709769	29715083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
Isoform_7114_246	chr10	+	955	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	-30	6	-30	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTGTTCTGTTTCTAA	4415	False	NA	14	True	ATTAAA	-13	NA	79978118	79981646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
Isoform_71140_109	chr17	+	2753	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	-58	3	-58	1	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGAGTTTTCCATTC	NA	False	NA	14	True	AATAAA	-15	NA	29709668	29715083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
Isoform_7115_3258	chr10	+	894	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	31	6	-24	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	3258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTGTTCTGTTTCTAA	4476	False	NA	14	True	ATTAAA	-13	NA	79978179	79981646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
Isoform_7116_3258	chr10	+	869	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	56	6	1	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	3258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTGTTCTGTTTCTAA	4501	False	NA	14	True	ATTAAA	-13	NA	79978204	79981646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
Isoform_71166_531	chr17	+	3588	13	FSM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	6	1	0	0	multi-exon	TRUE	canonical	3	108	junction_11	15.481844205391	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29768764	29825868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
Isoform_71171_30	chr17	+	1963	9	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	-22093	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	44.8857925740428	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCCATATGTATTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	29768764	29803775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29802942
Isoform_71172_10	chr17	+	1962	9	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	-22097	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	45.5286654208093	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAACCCATATGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	29768764	29803771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29802939
Isoform_71173_31	chr17	+	3531	12	NIC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	38.1705611111127	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29768764	29825868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_29768969_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
Isoform_71176_9	chr17	+	1841	9	FSM	ENSMUSG00000090083.12	ENSMUST00000234362.2	1780	9	-59	-2	19	2	multi-exon	FALSE	canonical	2	15	junction_3	87.2496418330757	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	NA	False	NA	18	True	AATAAA	-17	NA	29833882	29860625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29834053_29840482_29840612_29845479_29845817_29845920_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
Isoform_71177_418	chr17	+	1949	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	115	3340	15	2	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	NA	False	NA	18	True	AATAAA	-17	NA	29833878	29860625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
Isoform_71178_72	chr17	+	2039	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	25	3340	-7	2	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	NA	False	NA	18	True	AATAAA	-17	NA	29833788	29860625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
Isoform_71187_449	chr17	+	3700	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	60	2620	34	0	multi-exon	FALSE	canonical	3	368	junction_15	33.7979652859003	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879628	29922333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
Isoform_71189_44	chr17	+	3058	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	30	3292	4	415	multi-exon	FALSE	canonical	3	368	junction_15	33.7979652859003	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTTGTTTCTTGTGGT	NA	False	NA	18	True	NA	NA	NA	29879598	29921661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
Isoform_71190_8	chr17	+	6316	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	61	3	35	-3	multi-exon	FALSE	canonical	3	368	junction_15	33.7979652859003	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCTGTTTCTCTCTGA	NA	False	NA	25	True	AATAAA	-27	NA	29879629	29924950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
Isoform_71193_10	chr17	+	3643	24	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	87.7941612227232	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879627	29922333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
Isoform_71194_8	chr17	+	3700	24	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	4	2	combination_of_known_junctions	TRUE	canonical	3	48	junction_8	87.7941612227232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29879572	29922335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
Isoform_71195_10	chr17	+	3565	23	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	98.1865318733802	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879628	29922333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_29879746_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
Isoform_71201_27	chr17	+	2687	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	352	0	21	0	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATTGTCTGTGTTGGC	NA	False	NA	7	True	ATTAAA	-16	NA	30224058	30428996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
Isoform_71202_18	chr17	+	2721	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	316	2	1	0	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTGTCTGTGTTG	NA	False	NA	5	True	ATTAAA	-14	NA	30224022	30428994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
Isoform_71204_28	chr17	+	1074	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	352	1613	21	-10	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGAGCATGGCTAG	NA	False	NA	12	True	ATTAAA	-13	NA	30224058	30427383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
Isoform_71206_19	chr17	+	1127	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	299	1613	-16	-10	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGAGCATGGCTAG	NA	False	NA	12	True	ATTAAA	-13	NA	30224005	30427383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
Isoform_71207_4	chr17	+	2967	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	68	4	68	-2	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGGATTGTCTGTGT	NA	False	NA	3	True	ATTAAA	-12	NA	30223774	30428992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
Isoform_71209_5	chr17	+	1045	5	FSM	ENSMUSG00000044477.13	ENSMUST00000057897.10	2640	5	-22	1617	-6	-16	multi-exon	FALSE	canonical	2	8	junction_3	41.3037528561268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATTTGTTTTGAGCAT	NA	False	NA	6	True	ATTAAA	-7	NA	30224015	30427377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30411536_30411705_30426991
Isoform_71210_3	chr17	+	2943	5	FSM	ENSMUSG00000044477.13	ENSMUST00000226421.3	3489	5	-261	807	54	1	multi-exon	FALSE	canonical	2	11	junction_1	47.3623004086584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGATTGTCTGTGTTGG	NA	False	NA	6	True	ATTAAA	-15	NA	30223760	30428995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_30224283_30354296_30354480_30372276_30372343_30411536_30411705_30426991
Isoform_71213_3	chr17	+	3213	19	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	33	132350	16	-588	5prime_fragment	FALSE	canonical	3	31	junction_2	9.0921211313239	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGCTGCTTCCACGAC	233	False	NA	NA	False	AGTAAA	-27	NA	30845942	30902937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604
Isoform_71214_7	chr17	+	3441	20	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	33	131703	16	59	5prime_fragment	FALSE	canonical	3	31	junction_2	9.07494190819529	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTGGGTCCTTTCCCT	233	False	NA	NA	False	AATAAA	-22	NA	30845942	30903584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104
Isoform_71215_11	chr17	+	3427	23	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	31	122274	14	9488	5prime_fragment	TRUE	canonical	3	31	junction_2	9.57527808542515	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAGATGAATTTAAAA	231	False	NA	NA	False	NA	NA	NA	30845940	30913013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922
Isoform_71218_3	chr17	+	3536	22	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	148368	0	4391	0	3prime_fragment	TRUE	canonical	3	35	junction_4	13.8859951634013	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCGCCTGTCTCTTCC	1158	False	NA	24	True	ATTAAA	-15	NA	31003097	31094238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
Isoform_71219_3	chr17	+	3275	20	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	151410	1	7433	0	3prime_fragment	FALSE	canonical	3	35	junction_2	13.9029082830091	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCTCGCCTGTCTCTTC	4200	False	NA	23	True	ATTAAA	-14	NA	31006139	31094237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
Isoform_71220_3	chr17	+	2949	18	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	158910	3	-5711	-2	3prime_fragment	FALSE	canonical	3	38	junction_7	13.061472969178	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGCTCGCCTGTCTCT	NA	False	NA	21	True	ATTAAA	-12	NA	31013639	31094235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
Isoform_71221_3	chr17	+	2974	17	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	164556	0	-65	0	3prime_fragment	FALSE	canonical	3	38	junction_6	12.5882820015282	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCGCCTGTCTCTTCC	NA	False	NA	24	True	ATTAAA	-15	NA	31019285	31094238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
Isoform_71222_3	chr17	+	2850	13	FSM	ENSMUSG00000024027.9	ENSMUST00000114574.3	5811	13	3	2958	3	266	multi-exon	TRUE	canonical	0	0	junction_2	2.40947204913349	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAATCCTTGTTGTCTCG	5256	False	NA	NA	False	AAGAAA	-16	NA	31120793	31156807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31120929_31127094_31127192_31128197_31128306_31137853_31137973_31138329_31138437_31143474_31143629_31144491_31144652_31148910_31148972_31149500_31149571_31149691_31149781_31150122_31150262_31151586_31151629_31155238
Isoform_71223_77	chr17	+	3575	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	42	2215	2	1285	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCTTCATTTAATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	31276702	31334747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
Isoform_71225_4	chr17	+	5814	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	9	9	9	-9	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTACGTGCATTT	NA	False	NA	NA	False	AATAAA	-24	NA	31276669	31336953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
Isoform_71226_4	chr17	+	3784	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	-168	2216	-156	1284	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCTTCATTTAATT	NA	False	NA	NA	False	ATTAAA	-13	NA	31276492	31334746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
Isoform_71227_25	chr17	+	2856	13	FSM	ENSMUSG00000042345.16	ENSMUST00000151620.9	2539	13	0	-317	0	317	multi-exon	FALSE	canonical	3	21	junction_1	6.05300659911163	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCGCTCAGGTCGTTT	NA	False	NA	6	True	CATAAA	-19	NA	31431086	31461381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31431206_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
Isoform_71229_33	chr17	+	2987	13	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	0	320	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.05300659911163	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCTCAGGTCGTTTTCT	NA	False	NA	9	True	CATAAA	-22	NA	31431086	31461384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
Isoform_71233_4	chr17	+	2952	20	FSM	ENSMUSG00000024036.17	ENSMUST00000171233.9	2972	20	-22	42	-22	2	multi-exon	TRUE	canonical	2	5	junction_1	29.0842695772492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	31514434	31569671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31514729_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
Isoform_71235_50	chr17	+	2712	20	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	25.6401693159089	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	31515175	31569671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_31515230_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
Isoform_71240_255	chr17	+	3372	20	FSM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	-13	30	-2	2	multi-exon	FALSE	canonical	3	70	junction_8	17.4641698891444	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	31515175	31569671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
Isoform_71242_36	chr17	+	3413	20	FSM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	-54	30	-43	2	multi-exon	FALSE	canonical	3	70	junction_8	17.4641698891444	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	31515134	31569671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
Isoform_71246_5	chr17	+	2735	20	NIC	ENSMUSG00000024036.17	novel	1288	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	29.9874396605666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	31515966	31569671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_31516044_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
Isoform_71247_55	chr17	+	1916	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	20	153	20	1	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTCTGTATTTTTTTT	NA	False	NA	NA	False	AATATA	-13	NA	31605203	31695131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
Isoform_71248_11	chr17	+	2070	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	19	0	19	0	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGTGTGCATGTGTCCT	NA	False	NA	NA	False	ATTAAA	-22	NA	31605202	31695284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
Isoform_71249_17	chr17	+	1913	19	FSM	ENSMUSG00000041119.13	ENSMUST00000127929.8	1891	19	-24	2	20	1	multi-exon	FALSE	canonical	3	20	junction_18	14.1770114735436	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTCTGTATTTTTTTT	NA	False	NA	NA	False	AATATA	-13	NA	31605203	31695131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694901
Isoform_71250_4	chr17	+	2038	19	FSM	ENSMUSG00000041119.13	ENSMUST00000127929.8	1891	19	0	-147	0	-2	multi-exon	FALSE	canonical	3	20	junction_18	14.1770114735436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGGGGTGTGCATGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	31605227	31695280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694901
Isoform_71252_3	chr17	+	2088	18	NIC	ENSMUSG00000041119.13	novel	2089	19	NA	NA	20	0	intron_retention	FALSE	canonical	3	53	junction_17	8.0008650051385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGTCTGTATTTTTTT	NA	False	NA	NA	False	AATATA	-12	NA	31605203	31695130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
Isoform_71253_12	chr17	+	2052	4	NIC	ENSMUSG00000024038.18	novel	1582	4	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	1724.13688551692	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCACTATGTGGTTATT	NA	False	NA	24	True	AATAAA	-14	NA	31739122	31750298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_31739236_31740542_31740667_31745775_31747376_31750083
Isoform_71254_85	chr17	+	1545	4	FSM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	30	7	-2	-2	multi-exon	FALSE	canonical	3	77	junction_3	1707.19269237216	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCACTATGTGGTTATT	NA	False	NA	24	True	AATAAA	-14	NA	31739121	31750298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31739236_31740542_31740667_31746283_31747376_31750083
Isoform_71255_907	chr17	+	451	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	35	7	0	-2	multi-exon	FALSE	canonical	3	3604	junction_2	48.5	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCACTATGTGGTTATT	NA	False	NA	24	True	AATAAA	-14	NA	31739123	31750298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31739236_31740542_31740667_31750083
Isoform_71262_5	chr17	+	4463	12	NIC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	6	-2	intron_retention	FALSE	canonical	3	26	junction_6	55.2265057934029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGATTGATTCTGTAAAGC	NA	False	NA	27	True	ATTAAA	-20	NA	31783738	31826665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
Isoform_71264_184	chr17	+	4217	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	31	4	6	-4	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACGATTGATTCTGTAAA	NA	False	NA	25	True	ATTAAA	-18	NA	31783738	31826663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
Isoform_7127_3	chr10	+	2834	9	NNC	ENSMUSG00000035621.14	novel	3727	9	NA	NA	0	-889	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	5.45435605731786	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTGATGGTTGCTA	NA	False	NA	NA	False	NA	NA	NA	79984105	79993312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989424_79989554_79989649_79989968_79990167_79990307_79990967_79991241_79992198
Isoform_71274_35	chr17	+	4185	11	FSM	ENSMUSG00000006705.14	ENSMUST00000237248.2	2014	11	-11	-2160	-11	-2	multi-exon	FALSE	canonical	3	26	junction_5	40.2970222224918	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGATTGATTCTGTAAAGC	NA	False	NA	27	True	ATTAAA	-20	NA	31783769	31826665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
Isoform_7128_8	chr10	+	3598	8	FSM	ENSMUSG00000035621.14	ENSMUST00000099492.10	3597	8	0	-1	0	0	multi-exon	FALSE	canonical	3	9	junction_7	4.49943307086389	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGCCCCTGGCTGTTC	NA	False	NA	25	True	AATAAA	-17	NA	79984105	79994202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990164_79990307_79990967_79991241_79992198
Isoform_71285_720	chr17	+	4564	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	310	0	0	0	multi-exon	TRUE	canonical	3	488	junction_12	76.5992747282172	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTTGATGTTGCCTC	NA	False	NA	22	True	ATTAAA	-24	NA	32255383	32281839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
Isoform_7129_3	chr10	+	3595	8	NNC	ENSMUSG00000035621.14	novel	3727	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	5.84144237150311	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGCCCCTGGCTGTTC	NA	False	NA	25	True	AATAAA	-17	NA	79984105	79994202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990167_79990307_79990967_79991241_79992198
Isoform_71298_47	chr17	+	4494	15	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	174.748332157525	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	19	True	ATTAAA	-21	NA	32255392	32281836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
Isoform_7130_3	chr10	+	3532	7	NNC	ENSMUSG00000035621.14	novel	3597	8	NA	NA	-220	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	6.23832242407097	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTGCCCCTGGCTGTT	842	False	NA	24	True	AATAAA	-16	NA	79985499	79994201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990167_79990307_79990967_79991241_79992198
Isoform_7132_40	chr10	+	1470	6	FSM	ENSMUSG00000045193.14	ENSMUST00000140774.2	912	6	-46	-512	0	-6	multi-exon	FALSE	canonical	3	335	junction_5	19.6936538001459	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATCTCGCTCTGACCA	6191	False	NA	NA	False	ATTAAA	-12	NA	80003673	80007483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
Isoform_71329_22	chr17	+	2605	14	FSM	ENSMUSG00000061126.6	ENSMUST00000237491.2	2618	14	-29	42	-29	4	multi-exon	FALSE	canonical	3	12	junction_1	21.761482720107	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCTCCGTTTATTTG	NA	False	NA	NA	False	ACTAAA	-22	NA	32671667	32712252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32671771_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
Isoform_7133_260	chr10	+	1253	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	62	6	0	-6	multi-exon	FALSE	canonical	3	285	junction_6	33.736314097555	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATCTCGCTCTGACCA	6191	False	NA	NA	False	ATTAAA	-12	NA	80003673	80007483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
Isoform_71331_21	chr17	+	2261	13	NNC	ENSMUSG00000061126.6	novel	2618	14	NA	NA	158	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	23.2920766213177	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTACTGGCATGGGGC	1494	False	NA	NA	False	AATAGA	-15	NA	32687593	32712295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275_32711738_32711759
Isoform_71334_4	chr17	+	2418	12	FSM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	21	-840	21	-1	multi-exon	FALSE	canonical	3	23	junction_2	19.6026646864634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTCTACTGGCATGGG	1357	False	NA	NA	False	AATAGA	-13	NA	32687456	32712293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
Isoform_71335_10	chr17	+	2007	10	NNC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	3475	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	22.9093759446398	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTGCTCCGTTTATT	NA	False	NA	NA	False	ACTAAA	-20	NA	32700699	32712250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275_32711738_32711759
Isoform_71336_21	chr17	+	1949	9	NNC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	3757	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	22.4523801633591	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTACTGGCATGGGGC	NA	False	NA	NA	False	AATAGA	-15	NA	32700981	32712295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275_32711738_32711759
Isoform_71338_3	chr17	+	2906	8	NNC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	3743	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	23.7770254400232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACAATTTGTGCTCCGT	NA	False	NA	NA	False	ACTAAA	-15	NA	32700967	32712245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275_32711738_32711759
Isoform_71340_3	chr17	+	2493	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	18	-818	18	-431	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTGTATGTGTCTCAG	NA	False	NA	NA	False	NA	NA	NA	32725453	32748686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
Isoform_71341_4	chr17	+	1976	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	1	-284	1	284	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTTGGGGCAGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	32725436	32748152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
Isoform_71342_3	chr17	+	2297	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	-8	-596	-8	596	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGGCTTCCTGTGTGGTG	NA	False	NA	NA	False	TTTAAA	-14	NA	32725427	32748464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
Isoform_71344_4	chr17	+	3014	13	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-16	51	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_12	9.27773619418492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTCTTTTAGTGTT	NA	False	NA	NA	False	AAAAAG	-11	NA	32725419	32749168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747338_32747690
Isoform_71345_9	chr17	+	2879	12	NIC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	2	22	combination_of_known_splicesites	FALSE	canonical	2	7	junction_11	10.0297079380366	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTAGGAGCAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	32725437	32749139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747690
Isoform_71346_3	chr17	+	2969	13	NIC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-7	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	10.8892786211433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAAAAATGAGAAATT	NA	False	NA	NA	False	NA	NA	NA	32725428	32749121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_32725553_32725867_32726083_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
Isoform_71347_46	chr17	+	2237	13	FSM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	4	1	4	0	multi-exon	TRUE	canonical	3	41	junction_1	14.6806278249036	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	20	True	NA	NA	NA	32755535	32770771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_71348_3	chr17	+	2410	12	NIC	ENSMUSG00000048440.17	novel	2242	13	NA	NA	4	-1	intron_retention	FALSE	canonical	3	41	junction_1	15.2992194474908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTAGCATGTCTTGGTTCC	NA	False	NA	18	True	NA	NA	NA	32755554	32770769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_71349_6	chr17	+	2089	12	FSM	ENSMUSG00000048440.17	ENSMUST00000165515.8	2078	12	-13	2	-5	0	multi-exon	FALSE	canonical	3	16	junction_2	22.7559818672762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	19	True	NA	NA	NA	32755537	32770770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32755630_32755968_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_71350_5	chr17	+	2764	13	NIC	ENSMUSG00000048440.17	novel	2242	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	22.1973471888472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	21	True	NA	NA	NA	32755558	32770772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763304_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_71352_100	chr17	+	2231	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	-5	1	-5	0	multi-exon	FALSE	canonical	3	62	junction_12	10.7625895273086	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	19	True	NA	NA	NA	32755537	32770770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_71353_3	chr17	+	3125	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	-5	-893	-5	892	multi-exon	FALSE	canonical	3	62	junction_12	10.7625895273086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTAGCTGCTTCATTTG	NA	False	NA	NA	False	NA	NA	NA	32755537	32771664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_71355_15	chr17	+	2086	12	NIC	ENSMUSG00000048440.17	novel	2227	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	20.9331876957963	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	19	True	NA	NA	NA	32755537	32770770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_32755630_32755971_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_71358_68	chr17	+	2143	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	0	233	0	-233	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTCTGAGTATTTTTAA	NA	False	NA	9	True	AATAAA	-18	NA	33184787	33197974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
Isoform_7136_17	chr10	+	833	8	FSM	ENSMUSG00000045193.14	ENSMUST00000054666.7	834	8	0	1	0	-1	multi-exon	FALSE	canonical	3	40	junction_6	141.847863313236	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCGACTCTGTGGCTTG	6191	False	NA	NA	False	AATAAA	-16	NA	80003673	80008619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80008247_80008347_80008470
Isoform_71361_48	chr17	+	2357	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	0	19	0	-19	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATAAATTCCTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	33184787	33198188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
Isoform_71362_61	chr17	+	2797	4	FSM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	-55	208	3	-208	multi-exon	FALSE	canonical	3	36	junction_3	3.55902608401044	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGGAATTTGTGC	NA	False	NA	12	True	AATAAA	-19	NA	33212115	33224223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221731
Isoform_71365_7	chr17	+	2673	3	NIC	ENSMUSG00000053390.17	novel	2950	4	NA	NA	3	-205	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGGAATTTGTGCATT	NA	False	NA	15	True	AATAAA	-22	NA	33212115	33224226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_33212233_33220931_33220993_33221731
Isoform_71366_9	chr17	+	2740	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	14	-1996	14	1996	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGATTTTGGTCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	33311445	33326028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
Isoform_71368_5	chr17	+	6406	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	-5	-5643	-5	-4	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGACTAGTGTGAGTCAC	NA	False	NA	NA	False	AATAAA	-14	NA	33311426	33329675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
Isoform_7137_22	chr10	+	2482	7	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	60	junction_6	113.828330783197	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCGACTCTGTGGCTTG	6191	False	NA	NA	False	AATAAA	-16	NA	80003673	80008619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80008347_80008470
Isoform_71370_152	chr17	+	3201	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	10	2577	10	497	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATAGTCGATCCTAG	NA	False	NA	1	True	AATAAA	-20	NA	33508527	33523638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
Isoform_71376_27	chr17	+	5776	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	10	2	10	-2	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	14	True	ATTAAA	-16	NA	33508527	33526213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
Isoform_71378_15	chr17	+	3461	3	NIC	ENSMUSG00000096910.3	novel	5788	4	NA	NA	1	511	intron_retention	FALSE	canonical	3	48	junction_2	25	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAGAATCTGAAAACTCA	NA	False	NA	15	True	AATAAA	-34	NA	33508518	33523652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_33508644_33519554_33519977_33520738
Isoform_71379_8	chr17	+	713	3	FSM	ENSMUSG00000024299.18	ENSMUST00000234715.2	2533	3	6	1814	6	-1814	multi-exon	FALSE	canonical	3	35	junction_2	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTAAGGCTGAAAGCAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	33743189	33748136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33743233_33747257_33747445_33747653
Isoform_7138_5	chr10	+	763	7	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	159.6200349441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCGACTCTGTGGCTTG	6190	False	NA	NA	False	AATAAA	-16	NA	80003672	80008619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80008247_80008347_80008470
Isoform_71380_3	chr17	+	2405	16	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	2997	5	2997	1	3prime_fragment	FALSE	canonical	1	1	junction_1	23.8854674552447	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAGAAGTAAATTACT	NA	False	NA	NA	False	AATAAA	-14	NA	33804573	33826733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_33804654_33805089_33805258_33807076_33807163_33809801_33809884_33811894_33812002_33812994_33813094_33813196_33813342_33816914_33817030_33817116_33817287_33820024_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
Isoform_71381_10	chr17	+	2291	15	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	3547	5	3547	1	3prime_fragment	FALSE	canonical	1	4	junction_4	23.6147869620987	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAGAAGTAAATTACT	NA	False	NA	NA	False	AATAAA	-14	NA	33805123	33826733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_33805258_33807076_33807163_33809801_33809884_33811894_33812002_33812994_33813094_33813196_33813342_33816914_33817030_33817116_33817287_33820024_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
Isoform_71382_10	chr17	+	2212	15	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	3625	6	3625	0	3prime_fragment	FALSE	canonical	1	4	junction_4	23.6147869620987	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAAGAAGTAAATTAC	NA	False	NA	NA	False	AATAAA	-13	NA	33805201	33826732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_33805258_33807076_33807163_33809801_33809884_33811894_33812002_33812994_33813094_33813196_33813342_33816914_33817030_33817116_33817287_33820024_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
Isoform_71384_34	chr17	+	1301	7	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	18500	5	2962	1	3prime_fragment	FALSE	canonical	3	43	junction_3	8.43932593411478	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAGAAGTAAATTACT	2226	False	NA	NA	False	AATAAA	-14	NA	33820076	33826733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
Isoform_71385_6	chr17	+	1223	4	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	19610	6	4072	0	3prime_fragment	FALSE	canonical	3	62	junction_3	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAAGAAGTAAATTAC	3336	False	NA	NA	False	AATAAA	-13	NA	33821186	33826732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_33821584_33823230_33823427_33823523_33823694_33826272
Isoform_71386_9	chr17	+	1232	7	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	176.614143135694	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4919	False	NA	25	True	AATACA	-15	NA	33848065	33850686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_33848191_33848595_33848673_33848743_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
Isoform_71388_75	chr17	+	1205	7	FSM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	3	3	3	-3	multi-exon	FALSE	canonical	3	63	junction_2	162.952702749397	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGGTACCTATGCC	4920	False	NA	26	True	AATACA	-16	NA	33848066	33850687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
Isoform_7139_30	chr10	+	650	3	FSM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	2	26	2	-26	multi-exon	FALSE	canonical	3	33	junction_1	13	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGACCTCCCCCTTGAT	NA	False	NA	17	True	AATAAA	-23	NA	80008779	80010954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80009009_80010042_80010160_80010650
Isoform_71390_6	chr17	+	1141	6	NIC	ENSMUSG00000073423.11	novel	1197	6	NA	NA	5	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	165.848846845554	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4922	False	NA	25	True	AATACA	-15	NA	33848068	33850686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_33848191_33848754_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
Isoform_71391_13	chr17	+	1650	4	ISM	ENSMUSG00000073423.11	ENSMUST00000172455.3	1544	5	-6	-22	5	-4	intron_retention	FALSE	canonical	3	354	junction_1	39.2031744746377	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4922	False	NA	25	True	AATACA	-15	NA	33848068	33850686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549
Isoform_71393_400	chr17	+	1128	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	3	66	3	-3	multi-exon	FALSE	canonical	3	354	junction_1	31.6569107779012	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGGTACCTATGCC	4920	False	NA	26	True	AATACA	-16	NA	33848066	33850687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
Isoform_7140_9	chr10	+	1402	2	ISM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	283	27	283	-27	3prime_fragment	FALSE	canonical	3	59	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGACCTCCCCCTTGA	NA	False	NA	16	True	AATAAA	-22	NA	80009060	80010953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_80010160_80010650
Isoform_71400_19	chr17	+	910	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	8	7	8	-7	multi-exon	FALSE	canonical	3	20	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTACCTCTCTGATTT	3485	False	NA	12	True	NA	NA	NA	33978973	33980837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_33979562_33980515
Isoform_71404_32	chr17	+	2938	10	ISM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	4	-2	1	2	intron_retention	FALSE	canonical	3	204	junction_2	55.0900497390129	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATTGTGTGGATGGAAGC	NA	False	NA	15	True	AATAAA	-18	NA	34029497	34041894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259
Isoform_71405_316	chr17	+	2634	11	FSM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	4	3	1	1	multi-exon	FALSE	canonical	3	204	junction_2	56.7176339421877	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029497	34041889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
Isoform_71407_9	chr17	+	3535	9	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	204	junction_2	57.0608228121537	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTATTGTGTGGATGG	NA	False	NA	11	True	AATAAA	-14	NA	34029496	34041890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259
Isoform_71409_39	chr17	+	782	6	FSM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	1	0	1	0	multi-exon	FALSE	canonical	3	63	junction_2	124.071592236096	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	12	True	AATAAA	-15	NA	34029497	34041891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34029540_34035159_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
Isoform_71411_6	chr17	+	3882	9	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	238	junction_1	46.4433458635357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029496	34041889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259
Isoform_71412_11	chr17	+	3582	10	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	238	junction_1	47.8789626216817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029497	34041889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
Isoform_71413_7	chr17	+	4482	8	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	238	junction_1	46.1408668301402	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029496	34041889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259
Isoform_71422_1807	chr17	+	496	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	22	10	0	-2	multi-exon	FALSE	canonical	3	7458	junction_2	513.174650798558	1807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCAATCTGTCTTTTC	4096	False	NA	23	True	AATATA	-14	NA	34043567	34057281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
Isoform_71424_26	chr17	+	4464	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	3	0	intron_retention	TRUE	non_canonical	0	0	junction_2	3967.30725919847	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4118	False	NA	25	True	AATATA	-16	NA	34043589	34057283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_34043655_34044574_34045810_34045837_34048791_34057072
Isoform_71426_193	chr17	+	424	3	FSM	ENSMUSG00000041881.14	ENSMUST00000173132.8	438	3	12	2	3	-2	multi-exon	FALSE	canonical	3	616	junction_1	4049.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCAATCTGTCTTTTC	4118	False	NA	23	True	AATATA	-14	NA	34043589	34057281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34043655_34048640_34048791_34057072
Isoform_71432_777	chr17	+	1159	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	29	1021	17	0	multi-exon	FALSE	canonical	3	326	junction_3	13.0072095393286	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7022	False	NA	23	True	ATTAAA	-16	NA	34062093	34067727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
Isoform_71434_10	chr17	+	1450	4	FSM	ENSMUSG00000002308.17	ENSMUST00000234506.2	1417	4	-33	0	17	0	multi-exon	FALSE	canonical	3	328	junction_3	11.8977121983832	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7022	False	NA	23	True	ATTAAA	-16	NA	34062093	34067727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34062266_34064989_34065116_34066468_34067153_34067259
Isoform_71435_9	chr17	+	1212	5	FSM	ENSMUSG00000002308.17	ENSMUST00000087559.8	1191	5	-19	-2	-19	0	multi-exon	FALSE	canonical	3	6	junction_1	143.673240375513	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7309	False	NA	23	True	ATTAAA	-16	NA	34062380	34067727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34062606_34064989_34065116_34066468_34066700_34066990_34067153_34067259
Isoform_71436_4	chr17	+	833	3	FSM	ENSMUSG00000092349.2	ENSMUST00000172817.2	807	3	-26	0	-26	0	multi-exon	FALSE	canonical	3	7	junction_1	58	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTGTTCTGACTTAAAT	1233	False	NA	13	True	NA	NA	NA	34124082	34125649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34124169_34124501_34124892_34125292
Isoform_7144_51	chr10	+	1906	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	223	2	223	-2	multi-exon	FALSE	canonical	3	63	junction_2	9.10433352249844	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGGGCCTCTCTGTTA	NA	False	NA	14	True	AATAAA	-15	NA	80015538	80025842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
Isoform_71441_44	chr17	+	2541	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	219.15347338785	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5646	False	NA	12	True	AATAAA	-23	NA	34128495	34134564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132779_34133037_34134316
Isoform_71443_2774	chr17	+	2507	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	74	0	21	0	multi-exon	FALSE	canonical	3	546	junction_5	66.597787546753	2774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5643	False	NA	12	True	AATAAA	-23	NA	34128492	34134564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
Isoform_71450_104	chr17	+	2626	7	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	18	0	intron_retention	FALSE	canonical	3	546	junction_5	71.9320667173009	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5640	False	NA	12	True	AATAAA	-23	NA	34128489	34134564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
Isoform_71454_60	chr17	+	2573	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	220.781728022433	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5675	False	NA	12	True	AATAAA	-23	NA	34128524	34134564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34128671_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
Isoform_7147_31	chr10	+	2151	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	-21	1	-21	-1	multi-exon	FALSE	canonical	3	63	junction_2	9.10433352249844	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGGCCTCTCTGTTAC	NA	False	NA	15	True	AATAAA	-16	NA	80015294	80025843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
Isoform_71473_44	chr17	+	2563	2	FSM	ENSMUSG00000051390.11	ENSMUST00000174463.2	387	2	7	-2183	7	0	multi-exon	FALSE	canonical	3	17	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCAACACCCCT	NA	False	NA	11	True	ATTAAA	-20	NA	34134884	34138299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34134939_34135790
Isoform_71474_19	chr17	+	2614	2	FSM	ENSMUSG00000051390.11	ENSMUST00000174463.2	387	2	-47	-2180	-47	-3	multi-exon	FALSE	canonical	3	17	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGGCTTCCCAACACC	NA	False	NA	8	True	ATTAAA	-17	NA	34134830	34138296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34134939_34135790
Isoform_71477_342	chr17	+	2594	2	FSM	ENSMUSG00000051390.11	ENSMUST00000053429.11	2612	2	18	0	18	0	multi-exon	FALSE	canonical	3	107	junction_1	0	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCAACACCCCT	NA	False	NA	11	True	ATTAAA	-20	NA	34135162	34138299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34135248_34135790
Isoform_71479_20	chr17	+	5497	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2898	8	NA	NA	2	-1	multi-exon	FALSE	canonical	3	107	junction_1	46.628853728137	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	NA	False	NA	11	True	AATAAA	-16	NA	34135161	34148264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_+_34135248_34135790_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
Isoform_71480_18	chr17	+	5494	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2589	8	NA	NA	2	-1	multi-exon	FALSE	canonical	3	105	junction_7	48.9117508887179	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	NA	False	NA	11	True	AATAAA	-16	NA	34135161	34148264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr17_+_34135248_34135790_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
Isoform_71481_299	chr17	+	2596	8	FSM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	300	2	-5	-1	multi-exon	FALSE	canonical	3	116	junction_6	36.6951033823983	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	592	False	NA	11	True	AATAAA	-16	NA	34138605	34148264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
Isoform_71482_52	chr17	+	2754	8	FSM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	142	2	-38	-1	multi-exon	FALSE	canonical	3	116	junction_6	36.6951033823983	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	434	False	NA	11	True	AATAAA	-16	NA	34138447	34148264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
Isoform_71486_267	chr17	+	2603	8	FSM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	-13	-1	-13	0	multi-exon	FALSE	canonical	3	105	junction_6	40.4101421902563	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGCCTCTCATTCTCCC	584	False	NA	13	True	AATAAA	-18	NA	34138597	34148266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
Isoform_71488_42	chr17	+	2751	8	FSM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	-163	1	-38	-1	multi-exon	FALSE	canonical	3	105	junction_6	40.4101421902563	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	434	False	NA	11	True	AATAAA	-16	NA	34138447	34148264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
Isoform_7149_4	chr10	+	2233	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	-104	2	-104	-2	multi-exon	FALSE	canonical	3	63	junction_2	9.10433352249844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGGGCCTCTCTGTTA	NA	False	NA	14	True	AATAAA	-15	NA	80015211	80025842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
Isoform_71493_6	chr17	+	2743	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	33.4050324617658	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3552	False	NA	11	True	AATAAA	-17	NA	34148873	34156660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151536_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_71494_152	chr17	+	2929	18	FSM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	319	4	-3	-4	multi-exon	FALSE	canonical	3	51	junction_2	23.5177912481234	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3553	False	NA	8	True	AATAAA	-14	NA	34148874	34156657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_71495_54	chr17	+	3289	18	FSM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	-38	1	1	-1	multi-exon	FALSE	canonical	3	51	junction_2	23.5177912481234	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3196	False	NA	11	True	AATAAA	-17	NA	34148517	34156660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_71498_14	chr17	+	2928	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.2465112005846	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3555	False	NA	11	True	AATAAA	-17	NA	34148876	34156660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156040
Isoform_71500_10	chr17	+	3301	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.2465112005846	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3182	False	NA	11	True	AATAAA	-17	NA	34148503	34156660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156040
Isoform_71502_4	chr17	+	3560	17	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	51	junction_2	22.9910818307882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3182	False	NA	11	True	AATAAA	-17	NA	34148503	34156660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_71505_5	chr17	+	4819	16	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	69	junction_1	19.1689563849702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3179	False	NA	10	True	AATAAA	-16	NA	34148500	34156659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34149019_34149218_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_71506_6	chr17	+	5070	15	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	69	junction_1	17.3394972033593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3186	False	NA	11	True	AATAAA	-17	NA	34148507	34156660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34149019_34149218_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_71508_5	chr17	+	2661	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	31.2534373109583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	4526	False	NA	11	True	AATAAA	-17	NA	34149847	34156660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34149918_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_71509_26	chr17	+	2746	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6331294599435	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	4568	False	NA	11	True	AATAAA	-17	NA	34149889	34156660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_71510_22	chr17	+	2780	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6331294599435	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	4534	False	NA	11	True	AATAAA	-17	NA	34149855	34156660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_71511_7	chr17	+	2757	17	NNC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	37.7631909900368	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4554	False	NA	10	True	AATAAA	-16	NA	34149875	34156659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156040
Isoform_71515_1502	chr17	+	2210	15	FSM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	17	2	17	-2	multi-exon	FALSE	canonical	3	240	junction_8	25.4498305996527	1502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTCTGGACCATCCTG	1996	False	NA	11	True	ATTAAA	-14	NA	34159650	34168669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
Isoform_71526_266	chr17	+	2579	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	262	542	129	520	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTGTCCTCTCCTTTGT	NA	False	NA	17	True	NA	NA	NA	34175047	34185467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_71527_190	chr17	+	2739	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	104	540	1	522	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCCTCTCCTTTGTCC	NA	False	NA	19	True	NA	NA	NA	34174889	34185469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_71528_30	chr17	+	3120	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	262	1	129	-1	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTGATTTTGTACTG	NA	False	NA	30	True	NA	NA	NA	34175047	34186008	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_71529_36	chr17	+	2791	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	46	546	46	516	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174831	34185463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_7153_953	chr10	+	2389	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	249	2	3	0	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8467	False	NA	17	True	TATAAA	-15	NA	80062516	80079735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_71530_7	chr17	+	2896	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	-59	546	-59	516	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174726	34185463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_71531_26	chr17	+	3276	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	104	3	1	-3	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAACTGTGATTTTGTAC	NA	False	NA	28	True	NA	NA	NA	34174889	34186006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_71532_12	chr17	+	2812	19	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	129	516	intron_retention	FALSE	canonical	2	228	junction_10	32.0886599714826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34175047	34185463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_71533_11	chr17	+	3009	19	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-38	516	intron_retention	FALSE	canonical	2	228	junction_10	32.0886599714826	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174850	34185463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_71534_6	chr17	+	3247	18	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	142	516	intron_retention	FALSE	canonical	2	228	junction_9	32.0626549248569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34175060	34185463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_71535_6	chr17	+	3418	18	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	1	516	intron_retention	FALSE	canonical	2	228	junction_9	32.0626549248569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174889	34185463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_71538_296	chr17	+	2638	10	FSM	ENSMUSG00000039656.18	ENSMUST00000044858.16	2627	10	-14	3	-14	1	multi-exon	FALSE	canonical	3	65	junction_7	51.2967642711639	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34250771	34257368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
Isoform_71541_478	chr17	+	2611	10	FSM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	-39	5	1	1	multi-exon	FALSE	canonical	3	122	junction_7	37.5838157971825	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34250786	34257368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
Isoform_71543_31	chr17	+	2642	10	FSM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	-70	5	-30	1	multi-exon	FALSE	canonical	3	122	junction_7	37.5838157971825	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34250755	34257368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
Isoform_7155_78	chr10	+	2511	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	248	-119	2	119	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACATGTTGCCCTGGCAT	8466	False	NA	7	True	NA	NA	NA	80062515	80079856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_71551_56	chr17	+	2328	10	FSM	ENSMUSG00000039656.18	ENSMUST00000173354.9	2502	10	173	1	-32	1	multi-exon	FALSE	canonical	3	20	junction_1	72.5503656472905	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34251342	34257368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
Isoform_71552_47	chr17	+	2316	10	FSM	ENSMUSG00000039656.18	ENSMUST00000116612.3	2283	10	-32	-1	-32	1	multi-exon	FALSE	canonical	3	20	junction_1	64.8690989609074	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34251342	34257368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
Isoform_71557_12	chr17	+	3228	9	NIC	ENSMUSG00000039656.18	novel	2577	10	NA	NA	-13	1	intron_retention	FALSE	canonical	3	122	junction_6	33.6749164809655	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34250772	34257368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
Isoform_71559_4	chr17	+	1035	4	ISM	ENSMUSG00000024334.10	ENSMUST00000025192.8	1088	5	1356	1	1274	0	3prime_fragment	FALSE	canonical	2	3	junction_1	6.79869268479038	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGTGTCCTTTTCAC	555	False	NA	NA	False	ACTAAA	-15	NA	34312669	34314207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_34313056_34313281_34313564_34313656_34313793_34313976
Isoform_7156_112	chr10	+	2428	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	210	2	-11	0	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8428	False	NA	17	True	TATAAA	-15	NA	80062477	80079735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_71560_5	chr17	+	1269	3	ISM	ENSMUSG00000024334.10	ENSMUST00000174670.2	1231	4	1266	0	1266	0	3prime_fragment	FALSE	canonical	2	15	junction_1	2	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGTGTCCTTTTCAC	547	False	NA	NA	False	ACTAAA	-15	NA	34312661	34314207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_34313564_34313656_34313793_34313976
Isoform_71561_34	chr17	+	1118	5	FSM	ENSMUSG00000037649.11	ENSMUST00000236322.2	1108	5	-27	17	-27	5	multi-exon	FALSE	canonical	3	37	junction_1	3.83242742918897	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGACCTCTCCCTCCACG	6771	False	NA	11	True	AATAAA	-19	NA	34354574	34358057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34354733_34356087_34356373_34356876_34357156_34357380_34357510_34357790
Isoform_71562_19	chr17	+	1288	6	FSM	ENSMUSG00000079547.5	ENSMUST00000114232.4	1404	6	109	7	109	-7	multi-exon	FALSE	canonical	3	11	junction_3	6.61513416341649	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCCCAAGTTTGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	34372154	34379197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34372428_34374406_34374689_34376219_34376505_34378317_34378435_34378602_34378639_34378902
Isoform_71563_15	chr17	+	3013	11	FSM	ENSMUSG00000037321.18	ENSMUST00000170086.8	2953	11	-60	0	-60	0	multi-exon	FALSE	canonical	0	0	junction_8	3.91024295920343	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCCGTTTCTTAGCT	6931	False	NA	NA	False	AATAAA	-20	NA	34406466	34416199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34407380_34408151_34408267_34408403_34408535_34409536_34409743_34410302_34410501_34411810_34411940_34412101_34412291_34412458_34412633_34412854_34413018_34413817_34413955_34415541
Isoform_71566_9	chr17	+	2443	12	FSM	ENSMUSG00000024339.13	ENSMUST00000025197.6	3442	12	998	1	-42	-1	multi-exon	FALSE	canonical	1	1	junction_4	2.62221910942836	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTTATGGTTACTAC	6144	False	NA	NA	False	AATAAA	-24	NA	34423498	34435294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34423598_34424260_34424759_34424843_34424959_34427727_34427859_34428063_34428270_34430843_34431042_34431203_34431333_34432988_34433178_34433296_34433471_34433619_34433780_34434307_34434445_34434887
Isoform_71567_17	chr17	+	1181	6	FSM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	31	0	-10	0	multi-exon	FALSE	canonical	3	16	junction_1	17.3735431043872	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTGATAATTGCTG	NA	False	NA	12	True	NA	NA	NA	34482213	34488393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34482380_34483734_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
Isoform_71568_3	chr17	+	1212	5	ISM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	1346	9	1224	0	3prime_fragment	FALSE	canonical	3	50	junction_2	5.35607132140714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGATTTGGCTTTGA	NA	False	NA	3	True	NA	NA	NA	34483528	34488384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
Isoform_71569_13	chr17	+	1081	5	ISM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	1481	5	1359	4	3prime_fragment	FALSE	canonical	3	50	junction_2	5.35607132140714	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTGGCTTTGATAAT	NA	False	NA	7	True	NA	NA	NA	34483663	34488388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
Isoform_71570_167	chr17	+	1160	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	35	474	-24	1	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCATAGAGTTTCAA	NA	False	NA	13	True	AATAAA	-17	NA	34524875	34535174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
Isoform_71571_41	chr17	+	1184	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	5	480	5	-5	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCATCTGCTTCATAGAG	NA	False	NA	7	True	AATAAA	-11	NA	34524845	34535168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
Isoform_71572_4	chr17	+	1755	5	NIC	ENSMUSG00000060586.12	novel	1171	6	NA	NA	-28	1	intron_retention	FALSE	canonical	3	177	junction_2	8.63133825081603	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCATAGAGTTTCAA	NA	False	NA	13	True	AATAAA	-17	NA	34524871	34535174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34525022_34528564_34528835_34533143_34534128_34534529_34534554_34534847
Isoform_71573_6	chr17	+	1098	6	FSM	ENSMUSG00000060586.12	ENSMUST00000236232.2	1082	6	-16	0	-16	0	multi-exon	FALSE	canonical	2	14	junction_1	73.665731517443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34524883	34535173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34525022_34528617_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
Isoform_71577_4	chr17	+	3920	20	ISM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	43	6446	13	-414	5prime_fragment	TRUE	canonical	3	55	junction_11	8.39997361821474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTCCTGTTTACCCTG	NA	False	NA	NA	False	AATAAA	-18	NA	34783284	34801031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352
Isoform_71578_101	chr17	+	6543	30	FSM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	43	5	13	-5	multi-exon	TRUE	canonical	3	55	junction_11	11.3350235386032	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTTCTGAGGGACTA	NA	False	NA	9	True	AATAAA	-18	NA	34783284	34807472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
Isoform_71582_6	chr17	+	1339	4	FSM	ENSMUSG00000034786.18	ENSMUST00000038244.15	1343	4	4	0	4	0	multi-exon	FALSE	canonical	2	5	junction_1	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGACTGGTATCTGGGG	NA	False	NA	5	True	AATAAA	-18	NA	34808783	34810728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34809235_34809434_34809538_34809715_34809916_34810143
Isoform_71583_23	chr17	+	2192	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	18	858	18	-65	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTTTTAATTGTTTC	NA	False	NA	9	True	AAGAAA	-17	NA	34811254	34815516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
Isoform_71584_10	chr17	+	2386	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	-47	729	-47	64	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCACTTGAGAAGTAAG	NA	False	NA	30	True	AATAAA	-20	NA	34811189	34815645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
Isoform_71585_23	chr17	+	3071	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	-1	-2	-1	2	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGAGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-22	NA	34811235	34816376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
Isoform_71588_4	chr17	+	2065	7	NIC	ENSMUSG00000034254.18	novel	832	5	NA	NA	16	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	46.4171903022528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTCTCTGCGGCCTGTTG	NA	False	NA	17	True	AATAAA	-17	NA	34823251	34832396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_34823465_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
Isoform_71589_9	chr17	+	2056	7	FSM	ENSMUSG00000034254.18	ENSMUST00000173973.8	1105	7	29	-980	29	5	multi-exon	FALSE	canonical	1	5	junction_3	44.7688507781917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTGCGGCCTGTTGT	NA	False	NA	18	True	AATAAA	-18	NA	34824863	34832397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34825146_34829418_34829619_34829845_34829901_34830247_34830424_34830578_34830675_34830764_34830841_34831226
Isoform_71590_337	chr17	+	2153	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	30	7	30	-6	multi-exon	FALSE	canonical	3	118	junction_1	5.07991688470939	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCAGTGGTTGATATCC	NA	False	NA	37	True	AATAAA	-37	NA	34824864	34832416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
Isoform_71594_3	chr17	+	1292	2	FSM	ENSMUSG00000033739.9	ENSMUST00000174796.2	257	2	-33	-1002	-33	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGGTCTGTGTTGTG	7403	False	NA	4	True	ATTAAA	-17	NA	34863781	34865298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34863928_34864152
Isoform_71595_41	chr17	+	1211	2	FSM	ENSMUSG00000033739.9	ENSMUST00000036720.9	1270	2	59	0	-18	0	multi-exon	FALSE	canonical	3	34	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGGTCTGTGTTGTG	7418	False	NA	4	True	ATTAAA	-17	NA	34863796	34865298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34863928_34864218
Isoform_71599_1498	chr17	+	2503	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	57	6	2	-6	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACGGCGGCCACCTTC	9798	False	NA	5	True	AATAAA	-18	NA	34866176	34874042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
Isoform_71600_371	chr17	+	2556	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	4	6	4	-6	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACGGCGGCCACCTTC	9745	False	NA	5	True	AATAAA	-18	NA	34866123	34874042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
Isoform_71610_80	chr17	+	1422	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	25	0	25	0	multi-exon	FALSE	canonical	3	133	junction_1	19.7434940057619	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	3001	False	NA	30	True	AATAAA	-19	NA	35056019	35058162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_71612_3	chr17	+	1454	6	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	12	-7	intron_retention	FALSE	canonical	3	133	junction_1	20.3115730557729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	3051	False	NA	23	True	AATAAA	-12	NA	35056069	35058155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35056193_35056368_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_71613_22	chr17	+	1448	7	FSM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	23	48	23	-1	multi-exon	FALSE	canonical	3	41	junction_1	48.3439643480847	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCTGTGTCTGAAT	2999	False	NA	29	True	AATAAA	-18	NA	35056017	35058161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35056218_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_71617_5	chr17	+	1700	5	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	12	0	intron_retention	FALSE	canonical	3	152	junction_1	16.3458710382775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2988	False	NA	30	True	AATAAA	-19	NA	35056006	35058162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_71618_6	chr17	+	1860	4	NIC	ENSMUSG00000040482.17	novel	701	5	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	152	junction_1	15.4560308258262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCTGTGTCTGAAT	2973	False	NA	29	True	AATAAA	-18	NA	35055991	35058161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_7162_63	chr10	+	3364	13	FSM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	29	-1	4	0	multi-exon	FALSE	canonical	3	168	junction_1	107.02790394202	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8468	False	NA	17	True	TATAAA	-15	NA	80062517	80079735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_71620_72	chr17	+	1381	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	101.735146335964	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	4	True	NA	NA	False	AAAAAG	-13	NA	35069383	35075348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_71621_202	chr17	+	1270	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	0	111	0	7	multi-exon	FALSE	canonical	3	201	junction_1	101.735146335964	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGCCTCTAGTCTTTCA	4	True	NA	37	True	AGTAAA	-27	NA	35069383	35075237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_71625_9	chr17	+	4865	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	21	-3487	11	3369	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGACATTGTTTAACT	15	False	NA	NA	False	NA	NA	NA	35069394	35078717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_71626_145	chr17	+	1507	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	10	-118	0	0	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	4	True	NA	NA	False	AAAAAG	-13	NA	35069383	35075348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_71627_344	chr17	+	1392	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	10	-3	0	3	multi-exon	TRUE	canonical	3	266	junction_1	84.0802592764794	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTCAGCCTCTAGTCT	4	True	NA	33	True	AGTAAA	-23	NA	35069383	35075233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_71629_27	chr17	+	1446	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	49	112	32	3	multi-exon	FALSE	canonical	3	52	junction_1	144.013228559046	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTCAGCCTCTAGTCT	6	True	NA	33	True	AGTAAA	-23	NA	35069415	35075233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_71630_10	chr17	+	1562	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	49	-4	32	1	multi-exon	FALSE	canonical	3	52	junction_1	144.013228559046	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTGTAACTGCTTTA	6	True	NA	NA	False	AAAAAG	-14	NA	35069415	35075349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_71635_14	chr17	+	2034	2	FSM	ENSMUSG00000049823.10	ENSMUST00000052778.10	1858	2	-197	21	-197	-21	multi-exon	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAGGGAAAAAAAAAAAA	2563	False	NA	5	True	CATAAA	-13	NA	35113337	35115822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35113746_35114196
Isoform_71636_17	chr17	+	1843	2	FSM	ENSMUSG00000049823.10	ENSMUST00000052778.10	1858	2	-8	23	-8	-23	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAGGGAAAAAAAAAA	2752	False	NA	3	True	CATAAA	-11	NA	35113526	35115820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35113746_35114196
Isoform_71637_41	chr17	+	3897	28	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	11	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_14	98.9641965990974	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	6681	False	NA	15	True	AATAAA	-16	NA	35117455	35133023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_71638_302	chr17	+	3872	28	FSM	ENSMUSG00000013787.16	ENSMUST00000114033.9	3882	28	5	5	5	-1	multi-exon	TRUE	canonical	3	141	junction_1	79.9703820344975	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	6675	False	NA	14	True	AATAAA	-15	NA	35117449	35133022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_71641_10	chr17	+	3793	27	NIC	ENSMUSG00000013787.16	novel	3746	27	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	102.816613040694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	6682	False	NA	14	True	AATAAA	-15	NA	35117456	35133022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_71642_150	chr17	+	3762	27	FSM	ENSMUSG00000013787.16	ENSMUST00000078061.13	3746	27	-17	1	13	-1	multi-exon	FALSE	canonical	3	123	junction_9	83.6524314646073	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	6683	False	NA	14	True	AATAAA	-15	NA	35117457	35133022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_71646_16	chr17	+	4058	27	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	93.2398764274868	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	7166	False	NA	15	True	AATAAA	-16	NA	35117940	35133023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_71647_148	chr17	+	4023	27	FSM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	1	2	1	-2	multi-exon	FALSE	canonical	3	188	junction_9	70.6987525311972	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCTGGTGATTGTTTC	7173	False	NA	17	True	AATAAA	-18	NA	35117947	35133025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_71653_89	chr17	+	3918	26	FSM	ENSMUSG00000013787.16	ENSMUST00000097342.10	3934	26	18	-2	1	-1	multi-exon	FALSE	canonical	3	123	junction_8	74.3555135817109	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	7173	False	NA	14	True	AATAAA	-15	NA	35117947	35133022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_7167_335	chr10	+	2478	14	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	122.224887305831	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8480	False	NA	17	True	TATAAA	-15	NA	80062529	80079735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_71686_45	chr17	+	1008	5	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	12252	2	248	-2	3prime_fragment	FALSE	canonical	3	414	junction_3	11.4972822875669	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCTGGTGATTGTTTC	1769	False	NA	17	True	AATAAA	-18	NA	35130198	35133025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_71688_7	chr17	+	2263	21	FSM	ENSMUSG00000007034.16	ENSMUST00000007249.15	2261	21	0	-2	0	2	multi-exon	TRUE	non_canonical	1	2	junction_1	7.56240702422185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATGGCTTTATTTTCA	1279	False	NA	NA	False	ATTAAA	-25	NA	35133445	35149334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35133497_35135622_35135672_35136293_35136368_35136492_35136572_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
Isoform_71689_7	chr17	+	2208	19	ISM	ENSMUSG00000007034.16	ENSMUST00000007249.15	2261	21	2801	0	-448	0	3prime_fragment	FALSE	non_canonical	1	3	junction_2	7.25313895436714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATGGCTTTATTTT	139	False	NA	NA	False	ATTAAA	-23	NA	35136246	35149332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_35136368_35136492_35136572_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
Isoform_71690_3	chr17	+	2210	18	NIC	ENSMUSG00000007034.16	novel	2261	21	NA	NA	-337	-12	intron_retention	FALSE	non_canonical	1	3	junction_1	7.25940506775289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTCTTGATAAGTTTA	250	False	NA	NA	False	ATTAAA	-11	NA	35136357	35149320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35136572_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
Isoform_71691_20	chr17	+	2220	18	FSM	ENSMUSG00000007034.16	ENSMUST00000169230.2	2246	18	-54	80	-54	0	multi-exon	FALSE	non_canonical	1	4	junction_1	7.17888098382546	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATGGCTTTATTTT	66	False	NA	NA	False	ATTAAA	-23	NA	35136640	35149332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35136853_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
Isoform_71692_4	chr17	+	1125	8	ISM	ENSMUSG00000007034.16	ENSMUST00000169230.2	2246	18	9844	83	9844	-3	3prime_fragment	FALSE	canonical	3	13	junction_4	6.91641053537726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGTTTATGGCTTTAT	4233	False	NA	NA	False	ATTAAA	-20	NA	35146538	35149329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
Isoform_71695_12	chr17	+	2428	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	47	-1	-14	1	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	7970	False	NA	NA	False	NA	NA	NA	35150275	35154898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
Isoform_71696_52	chr17	+	2360	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	114	0	53	0	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8037	False	NA	NA	False	NA	NA	NA	35150342	35154897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
Isoform_71697_56	chr17	+	1867	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	1	606	1	-606	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGCGTTTGTGGAGTC	7924	False	NA	7	True	NA	NA	NA	35150229	35154291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
Isoform_71698_227	chr17	+	1754	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	116	604	55	-604	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTTGTGGAGTCTG	8039	False	NA	9	True	NA	NA	NA	35150344	35154293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
Isoform_71701_46	chr17	+	2930	5	FSM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	53	636	53	-604	multi-exon	FALSE	canonical	3	117	junction_3	25.7001945517928	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTTGTGGAGTCTG	8037	False	NA	9	True	NA	NA	NA	35150342	35154293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35150524_35150891_35151085_35151541_35153162_35153258_35153482_35153580
Isoform_71703_7	chr17	+	2999	5	FSM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	-16	636	-16	-604	multi-exon	FALSE	canonical	3	117	junction_3	25.7001945517928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTTGTGGAGTCTG	7968	False	NA	9	True	NA	NA	NA	35150273	35154293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35150524_35150891_35151085_35151541_35153162_35153258_35153482_35153580
Isoform_71705_25	chr17	+	3025	4	NIC	ENSMUSG00000007038.6	novel	3619	5	NA	NA	55	-604	intron_retention	FALSE	canonical	3	122	junction_1	26.5120517668642	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTTGTGGAGTCTG	8039	False	NA	9	True	NA	NA	NA	35150344	35154293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35150524_35150891_35151085_35151541_35153482_35153580
Isoform_71708_1311	chr17	+	864	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	-25	1	-7	0	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGGTTTGTCGTCTGC	76	False	NA	25	True	AATAAA	-19	NA	35200830	35204866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
Isoform_7171_19	chr10	+	3453	13	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	16	0	intron_retention	FALSE	canonical	3	97	junction_1	125.203917004754	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8480	False	NA	16	True	TATAAA	-14	NA	80062529	80079734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80062641_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_71711_29	chr17	+	777	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174241.8	521	4	-39	-217	-8	-1	multi-exon	FALSE	canonical	3	88	junction_1	766.950237412224	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCCTGGTTTGTCGTCT	93	False	NA	23	True	AATAAA	-17	NA	35200847	35204864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35201062_35204084_35204116_35204224_35204285_35204392
Isoform_71714_289	chr17	+	852	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	20	1	-10	0	multi-exon	FALSE	canonical	3	278	junction_1	596.250995806296	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGGTTTGTCGTCTGC	263	False	NA	25	True	AATAAA	-19	NA	35201124	35204866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
Isoform_71716_21	chr17	+	1091	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174860.8	691	4	-7	-393	3	0	multi-exon	FALSE	canonical	3	1479	junction_1	117.83132954449	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGGTTTGTCGTCTGC	276	False	NA	25	True	AATAAA	-19	NA	35201137	35204866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35201664_35204084_35204116_35204224_35204285_35204392
Isoform_71728_702	chr17	+	4168	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	-27	-4	-27	4	multi-exon	TRUE	canonical	0	0	junction_12	417.564149877336	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9447	False	NA	14	True	AATAAA	-15	NA	35219935	35235302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
Isoform_71729_3364	chr17	+	4038	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	102	-3	38	3	multi-exon	FALSE	canonical	0	0	junction_12	417.564149877336	3364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	9576	False	NA	13	True	AATAAA	-14	NA	35220064	35235301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
Isoform_71747_601	chr17	+	3966	29	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	354	-4	24	4	3prime_fragment	FALSE	canonical	0	0	junction_11	424.60875598987	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	10	True	NA	14	True	AATAAA	-15	NA	35220316	35235302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
Isoform_71748_403	chr17	+	4013	29	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	307	-4	-23	4	3prime_fragment	FALSE	canonical	0	0	junction_11	424.60875598987	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9781	False	NA	14	True	AATAAA	-15	NA	35220269	35235302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
Isoform_71793_772	chr17	+	1168	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	270	28	270	-28	multi-exon	TRUE	canonical	3	1084	junction_1	70.1524055182714	772	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTAGTGTTGTTTT	1946	False	NA	NA	False	AATAAA	-13	NA	35269211	35277697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
Isoform_71799_23	chr17	+	1283	7	FSM	ENSMUSG00000007039.13	ENSMUST00000174493.8	1254	7	-30	1	-30	-1	multi-exon	FALSE	canonical	3	26	junction_6	164.014989152415	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTGACTGGTTTCTC	NA	False	NA	16	True	AATAAA	-22	NA	35278046	35281070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280576_35280766
Isoform_71801_349	chr17	+	1309	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	36	-3	-30	-1	multi-exon	FALSE	canonical	3	393	junction_1	36.6488593122472	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTGACTGGTTTCTC	NA	False	NA	16	True	AATAAA	-22	NA	35278046	35281070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
Isoform_71804_57	chr17	+	1257	7	NIC	ENSMUSG00000007039.13	novel	682	4	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	154.377693408802	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGTGACTGGTTTCT	NA	False	NA	15	True	AATAAA	-21	NA	35278789	35281069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35278941_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
Isoform_71810_97	chr17	+	1046	4	NIC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-49	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	215.629826838084	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGTTAAGAGAGCTGT	NA	False	NA	15	True	NA	NA	NA	35295828	35297775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35295936_35296110_35296183_35296812_35296939_35297034
Isoform_71812_62	chr17	+	1038	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172678.8	750	4	-39	-249	-10	-5	multi-exon	FALSE	canonical	3	186	junction_1	129.208702837266	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGTTAAGAGAGCTGT	NA	False	NA	15	True	NA	NA	NA	35295867	35297775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35295967_35296110_35296183_35296812_35296939_35297034
Isoform_71813_44	chr17	+	1077	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172678.8	750	4	-78	-249	-49	-5	multi-exon	FALSE	canonical	3	186	junction_1	129.208702837266	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGTTAAGAGAGCTGT	NA	False	NA	15	True	NA	NA	NA	35295828	35297775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35295967_35296110_35296183_35296812_35296939_35297034
Isoform_71816_50	chr17	+	1220	3	FSM	ENSMUSG00000013766.12	ENSMUST00000013910.5	1142	3	-83	5	-48	-5	multi-exon	FALSE	canonical	3	419	junction_2	34.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGTTAAGAGAGCTGT	NA	False	NA	15	True	NA	NA	NA	35295829	35297775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35296183_35296812_35296939_35297034
Isoform_71819_29	chr17	+	2147	21	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	48.0332176727731	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTGCTTATGAGATG	NA	False	NA	31	True	AATAAA	-18	NA	35308252	35321962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35310794_35310984_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
Isoform_71821_1053	chr17	+	1965	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	-21	1	7	-1	multi-exon	FALSE	canonical	3	106	junction_5	22.1293102285439	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTGCTTATGAGATG	NA	False	NA	31	True	AATAAA	-18	NA	35308245	35321962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
Isoform_71826_9	chr17	+	694	3	FSM	ENSMUSG00000034482.3	ENSMUST00000037849.3	509	3	-8	-177	-8	177	multi-exon	TRUE	canonical	2	3	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTTTGTCGTCTCCTCT	6703	False	NA	NA	False	AATAAA	-11	NA	35327246	35331144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35327397_35329642_35329808_35330765
Isoform_71827_4	chr17	+	1469	4	NIC	ENSMUSG00000092417.4	novel	577	3	NA	NA	34	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	40.7785346584314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4623	False	NA	15	True	AATAAA	-15	NA	35340492	35343791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35340527_35341204_35341437_35342028_35342636_35343195
Isoform_71828_45	chr17	+	1259	3	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4601	False	NA	15	True	AATAAA	-15	NA	35340470	35343791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35340527_35342028_35342636_35343195
Isoform_71829_63	chr17	+	1231	3	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	40	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4629	False	NA	15	True	AATAAA	-15	NA	35340498	35343791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35340527_35342028_35342636_35343195
Isoform_71830_8	chr17	+	1709	4	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	42	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	41.0203201677738	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4631	False	NA	15	True	AATAAA	-15	NA	35340500	35343791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35340775_35341204_35341437_35342028_35342636_35343195
Isoform_71831_66	chr17	+	1479	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	40	-1	40	1	multi-exon	FALSE	canonical	3	45	junction_1	21.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4629	False	NA	15	True	AATAAA	-15	NA	35340498	35343791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35340775_35342028_35342636_35343195
Isoform_71832_22	chr17	+	1519	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	0	-1	0	1	multi-exon	FALSE	canonical	3	45	junction_1	21.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4589	False	NA	15	True	AATAAA	-15	NA	35340458	35343791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35340775_35342028_35342636_35343195
Isoform_71833_19	chr17	+	2731	2	FSM	ENSMUSG00000092417.4	ENSMUST00000052167.9	1295	2	-1427	-9	42	1	multi-exon	FALSE	canonical	3	88	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4631	False	NA	15	True	AATAAA	-15	NA	35340500	35343791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35342636_35343195
Isoform_71835_205	chr17	+	3924	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	276	junction_13	131.268238351857	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8515	False	NA	17	True	AATAAA	-18	NA	35354180	35366283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_71836_41	chr17	+	3777	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	169.610455447836	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8515	False	NA	17	True	AATAAA	-18	NA	35354180	35366283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
Isoform_71838_388	chr17	+	3907	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	434	junction_1	113.385261828864	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8529	False	NA	17	True	AATAAA	-18	NA	35354194	35366283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_71840_74	chr17	+	3787	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	156.645809781884	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8515	False	NA	30	True	AATAAA	-31	NA	35354180	35366296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
Isoform_71843_69	chr17	+	3829	25	FSM	ENSMUSG00000024392.18	ENSMUST00000025250.14	3858	25	27	2	0	0	multi-exon	FALSE	canonical	3	186	junction_11	162.018431736091	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8515	False	NA	30	True	AATAAA	-31	NA	35354180	35366296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_71852_26	chr17	+	3857	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	172.355233134619	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8539	False	NA	31	True	AATAAA	-32	NA	35354204	35366297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_71856_139	chr17	+	3803	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	276	junction_13	138.874711880889	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8793	False	NA	17	True	AATAAA	-18	NA	35354458	35366283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_71858_287	chr17	+	3779	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	346	junction_1	122.303229720233	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8828	False	NA	31	True	AATAAA	-32	NA	35354493	35366297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_7186_1845	chr10	+	750	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	9	-1	1	0	multi-exon	FALSE	canonical	3	1255	junction_1	343.259525783067	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9701	False	NA	24	True	AATAAA	-15	NA	80085294	80092627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
Isoform_71860_41	chr17	+	3659	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	162.957624859962	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTAGTAGTTTCGAG	8789	False	NA	19	True	AATAAA	-20	NA	35354454	35366285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
Isoform_71862_46	chr17	+	3687	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	168.319388861375	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8814	False	NA	30	True	AATAAA	-31	NA	35354479	35366296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_71864_80	chr17	+	3685	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	154.706302168191	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTAGTAGTTTCGAG	8802	False	NA	19	True	AATAAA	-20	NA	35354467	35366285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_71868_18	chr17	+	3720	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	178.059739507092	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	8825	False	NA	23	True	AATAAA	-24	NA	35354490	35366289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_7187_21	chr10	+	790	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	-33	1	-30	-1	multi-exon	FALSE	canonical	3	1255	junction_1	343.259525783067	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTGTGTTCTGTGTGG	9659	False	NA	22	True	AATAAA	-13	NA	80085252	80092625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
Isoform_71908_4779	chr17	+	1688	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	25	26	-7	1	multi-exon	FALSE	canonical	3	2129	junction_1	149.184985839729	4779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACCGTGTCTGTGGTGT	NA	False	NA	11	True	NA	NA	NA	35460746	35472657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
Isoform_71913_368	chr17	+	3865	10	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-7	1	intron_retention	FALSE	canonical	3	2129	junction_1	153.609975884895	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACCGTGTCTGTGGTGT	NA	False	NA	11	True	NA	NA	NA	35460746	35472657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
Isoform_7192_25	chr10	+	749	8	FSM	ENSMUSG00000020153.15	ENSMUST00000157063.2	722	8	-28	1	-3	0	multi-exon	FALSE	canonical	3	197	junction_2	732.821330230511	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9697	False	NA	24	True	AATAAA	-15	NA	80085290	80092627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80085326_80088230_80088268_80088912_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
Isoform_7193_24	chr10	+	666	7	NIC	ENSMUSG00000020153.15	novel	983	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	164	junction_2	752.472295540212	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9701	False	NA	24	True	AATAAA	-15	NA	80085294	80092627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80085326_80088230_80088268_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
Isoform_71956_3	chr17	+	1721	7	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	366	154	0	-8	intron_retention	FALSE	canonical	3	37	junction_3	6.9860973050449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAATTTGAAAGT	2085	False	NA	NA	False	NA	NA	NA	35482071	35486321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663
Isoform_71958_110	chr17	+	1583	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	368	151	2	-5	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATTTGAAAGTGAC	2087	False	NA	NA	False	NA	NA	NA	35482073	35486324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
Isoform_71959_21	chr17	+	1731	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	368	3	2	-3	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGGGTCACTATGCTG	2087	False	NA	23	True	AATAAA	-22	NA	35482073	35486472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
Isoform_71960_3	chr17	+	1952	5	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	498	156	132	-10	intron_retention	FALSE	canonical	3	37	junction_2	6.64736790015417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAATAATTTGAAA	2217	False	NA	NA	False	NA	NA	NA	35482203	35486319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457
Isoform_71961_3	chr17	+	1601	6	NIC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	132	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	18.1041431722134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAATAATTTGAAA	2217	False	NA	NA	False	NA	NA	NA	35482203	35486319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485841
Isoform_71964_6	chr17	+	2277	3	NNC	ENSMUSG00000091705.9	novel	1262	7	NA	NA	850	0	intron_retention	TRUE	non_canonical	0	0	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	5730	False	NA	NA	False	NA	NA	NA	35562067	35565738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35562365_35563730_35564087_35564114
Isoform_71965_14	chr17	+	1670	6	NIC	ENSMUSG00000091705.9	novel	1150	5	NA	NA	871	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	2.33238075793812	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	5751	False	NA	NA	False	NA	NA	NA	35562088	35565738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564635_35564685_35564819
Isoform_71966_3	chr17	+	1436	6	NIC	ENSMUSG00000067235.15	novel	1473	7	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	2.93938769133981	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTGTGTCAGTATG	NA	False	NA	NA	False	AATAAA	-19	NA	35780985	35785456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35781077_35781272_35781543_35781722_35781999_35783979_35784256_35784382_35784487_35785037
Isoform_71967_6131	chr17	+	1341	5	FSM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	19	2	19	-2	multi-exon	FALSE	canonical	3	3795	junction_3	232.519354033164	6131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCTGAATTTTGTTTTC	3055	False	NA	-2	True	AATAAA	-18	NA	35816933	35821667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184
Isoform_71968_138	chr17	+	1378	5	FSM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	-19	3	-19	-3	multi-exon	FALSE	canonical	3	3795	junction_3	232.519354033164	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTGAATTTTGTTTT	3017	False	NA	-3	True	AATAAA	-17	NA	35816895	35821666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184
Isoform_71983_5	chr17	+	2715	19	FSM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	26	7	26	3	multi-exon	FALSE	canonical	1	1	junction_1	38.8088461978693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGAGACTGCGATTT	4534	False	NA	23	True	AATAAA	-25	NA	35828098	35841905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35828127_35828687_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_71985_92	chr17	+	2709	18	FSM	ENSMUSG00000040312.15	ENSMUST00000164242.9	2656	18	-43	-10	-43	1	multi-exon	TRUE	canonical	3	44	junction_1	24.5503507751598	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4389	False	NA	21	True	AATAAA	-23	NA	35827953	35841903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_71986_6	chr17	+	2344	17	NIC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	30	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	36.9797241742012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTGAGAGACTGCG	4538	False	NA	19	True	AATAAA	-21	NA	35828102	35841901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_35828127_35829113_35829181_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_71987_11	chr17	+	2774	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-42	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	31.1318215242649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4390	False	NA	21	True	AATAAA	-23	NA	35827954	35841903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35828127_35829047_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_71988_12	chr17	+	2626	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	30	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	31.1318215242649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4538	False	NA	21	True	AATAAA	-23	NA	35828102	35841903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35828127_35829047_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_71989_7	chr17	+	3223	18	ISM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	77	9	77	1	3prime_fragment	FALSE	canonical	3	17	junction_1	29.5544772924118	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4585	False	NA	21	True	AATAAA	-23	NA	35828149	35841903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_71992_3	chr17	+	1370	3	ISM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	12175	9	459	1	3prime_fragment	FALSE	canonical	3	132	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4599	False	NA	21	True	AATAAA	-23	NA	35840247	35841903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_35841197_35841340_35841456_35841597
Isoform_71993_3	chr17	+	2413	3	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	-23	-267	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTATTTGCCTTCTTGGG	1640	False	NA	4	True	AATAAA	-18	NA	35863001	35867810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35863183_35865557_35865959_35865979
Isoform_71994_33	chr17	+	1123	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	2	6	2	-6	multi-exon	FALSE	canonical	3	7	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGTTCTCGAAGTGTA	NA	False	NA	10	True	AATAAA	-23	NA	36132577	36133809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36132821_36132929
Isoform_71995_278	chr17	+	1717	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	106	2	-11	-2	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATACTTCTTTCCTCA	NA	False	NA	23	True	ATTAAA	-21	NA	36134227	36143681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
Isoform_71997_11	chr17	+	1587	12	NIC	ENSMUSG00000059714.14	novel	1825	13	NA	NA	-14	-9	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	49.9444319318153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTATCTATACTTCT	NA	False	NA	16	True	ATTAAA	-14	NA	36134259	36143674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_36134394_36134698_36134756_36135018_36135095_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
Isoform_71999_4	chr17	+	1620	13	NIC	ENSMUSG00000059714.14	novel	697	8	NA	NA	17	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.160120457527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTCTTTCCTCACTCA	NA	False	NA	27	True	ATTAAA	-25	NA	36134457	36143685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_36134523_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
Isoform_72000_8	chr17	+	1844	12	ISM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	282	4	-14	-4	3prime_fragment	FALSE	canonical	3	176	junction_7	12.1464887964648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTATACTTCTTTCCT	NA	False	NA	21	True	ATTAAA	-19	NA	36134403	36143679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
Isoform_72002_5	chr17	+	772	4	FSM	ENSMUSG00000059714.14	ENSMUST00000173381.8	502	4	-114	-156	-114	-9	multi-exon	FALSE	canonical	3	201	junction_3	7.31816613336672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTATCTATACTTCT	NA	False	NA	16	True	ATTAAA	-14	NA	36140863	36143674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36141057_36141545_36141684_36141834_36142000_36143398
Isoform_72003_9	chr17	+	7205	16	FSM	ENSMUSG00000061607.16	ENSMUST00000082337.13	7335	16	130	0	-31	0	multi-exon	TRUE	canonical	3	53	junction_5	38.1950549446158	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9359	False	NA	15	True	NA	NA	NA	36152536	36170562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
Isoform_72005_25	chr17	+	7198	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-28	-1	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	32.7234879966465	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9362	False	NA	14	True	NA	NA	NA	36152539	36170561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
Isoform_72006_6	chr17	+	6708	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_8	39.0654152245521	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9361	False	NA	15	True	NA	NA	NA	36152538	36170562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
Isoform_72007_12	chr17	+	7257	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	38.3054391264043	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9389	False	NA	14	True	NA	NA	NA	36152566	36170561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
Isoform_72017_515	chr17	+	1448	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	18	0	-2	0	multi-exon	FALSE	canonical	3	236	junction_1	13.2748718344933	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGTCTGTCCATGAC	4607	False	NA	24	True	AATAAA	-18	NA	36172227	36176294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
Isoform_7202_91	chr10	+	2053	12	FSM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	-60	1	-2	-1	multi-exon	FALSE	canonical	3	126	junction_4	263.9061002555	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGTGCTGTCTGCTTG	NA	False	NA	11	True	AATAAA	-20	NA	80100847	80124241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
Isoform_72020_13	chr17	+	1251	3	FSM	ENSMUSG00000059791.15	ENSMUST00000172931.2	302	3	-152	-797	-4	-2	multi-exon	FALSE	canonical	1	2	junction_1	132.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACTTGTCTGTCCATG	4605	False	NA	22	True	AATAAA	-16	NA	36172225	36176292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36172410_36175003_36175181_36175402
Isoform_72021_5	chr17	+	2696	4	FSM	ENSMUSG00000034595.18	ENSMUST00000144382.8	2536	4	-56	-104	-24	0	multi-exon	FALSE	canonical	1	2	junction_1	38.7928974026031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	8840	False	NA	15	True	AATAAA	-22	NA	36176460	36186488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36176587_36178121_36179678_36184617_36184832_36185688
Isoform_72023_12	chr17	+	2720	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	23	0	23	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9350	False	NA	15	True	AATAAA	-22	NA	36176970	36186488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
Isoform_72024_16	chr17	+	2663	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	80	0	80	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9407	False	NA	15	True	AATAAA	-22	NA	36177027	36186488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
Isoform_72025_9	chr17	+	2987	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	-244	0	187	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9083	False	NA	15	True	AATAAA	-22	NA	36176703	36186488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
Isoform_72027_64	chr17	+	3178	3	FSM	ENSMUSG00000034595.18	ENSMUST00000187690.7	3185	3	7	0	7	0	multi-exon	FALSE	canonical	3	80	junction_1	4	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9893	False	NA	15	True	AATAAA	-22	NA	36177513	36186488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36179678_36184617_36184832_36185688
Isoform_72028_22	chr17	+	3990	3	FSM	ENSMUSG00000034595.18	ENSMUST00000187690.7	3185	3	-805	0	185	0	multi-exon	FALSE	canonical	3	80	junction_1	4	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9081	False	NA	15	True	AATAAA	-22	NA	36176701	36186488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36179678_36184617_36184832_36185688
Isoform_7203_43	chr10	+	2073	12	FSM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	-82	3	8	-3	multi-exon	FALSE	canonical	3	126	junction_4	263.9061002555	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGAGTGCTGTCTGCT	NA	False	NA	9	True	AATAAA	-18	NA	80100825	80124239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
Isoform_72034_343	chr17	+	3371	20	FSM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	-23	3	-23	1	multi-exon	TRUE	canonical	3	278	junction_2	372.558080768229	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGCCTTATGTCATTG	NA	False	NA	49	True	AATGAA	-39	NA	36190687	36203559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
Isoform_72057_417	chr17	+	1006	7	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	8108	3	-9	1	3prime_fragment	FALSE	canonical	3	1011	junction_1	73.3325757536626	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGCCTTATGTCATTG	7373	False	NA	49	True	AATGAA	-39	NA	36198818	36203559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
Isoform_72063_44	chr17	+	1033	6	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-41	0	intron_retention	FALSE	canonical	3	1016	junction_3	64.0387382761403	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGCCTTATGTCATT	7431	False	NA	48	True	AATGAA	-38	NA	36198876	36203558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
Isoform_72066_16	chr17	+	4355	20	FSM	ENSMUSG00000039220.17	ENSMUST00000087211.9	4255	20	-101	1	31	1	multi-exon	FALSE	canonical	3	16	junction_1	32.7700795901305	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGGTATGTTTCACTT	NA	False	NA	27	True	AATAAA	-27	NA	36227356	36243174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36227491_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
Isoform_72068_7	chr17	+	3765	2	FSM	ENSMUSG00000039220.17	ENSMUST00000133641.2	1385	2	204	-2584	-12	2584	multi-exon	FALSE	canonical	3	113	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	36227877	36231834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36227898_36228089
Isoform_72071_327	chr17	+	4240	20	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	16.24875874228	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTATGTTTCACT	NA	False	NA	26	True	AATAAA	-26	NA	36227877	36243173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
Isoform_72073_11	chr17	+	4462	20	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	16.24875874228	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTATGTTTCACT	NA	False	NA	26	True	AATAAA	-26	NA	36227655	36243173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
Isoform_72082_509	chr17	+	2158	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	95	595	95	-595	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTCCCCAGGTGGCCT	NA	False	NA	23	True	AATAAA	-17	NA	36290837	36299759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_72085_77	chr17	+	2250	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	3	595	3	-595	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTCCCCAGGTGGCCT	NA	False	NA	23	True	AATAAA	-17	NA	36290745	36299759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_72087_37	chr17	+	2748	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	69	31	69	-31	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTAATTATAGCAAACAG	NA	False	NA	NA	False	AAAAAG	-38	NA	36290811	36300323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_72089_40	chr17	+	2540	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	-279	587	-279	-587	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTGGCCTGAGGTGAG	NA	False	NA	31	True	AATAAA	-25	NA	36290463	36299767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_7209_40	chr10	+	2085	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105361.10	1537	12	-28	-520	4	5	multi-exon	FALSE	canonical	3	55	junction_11	285.507146282737	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTCTGCTTGTGTCTG	NA	False	NA	17	True	AATAAA	-26	NA	80100821	80124247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123369
Isoform_72092_36	chr17	+	2781	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	-528	595	-528	-595	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTCCCCAGGTGGCCT	NA	False	NA	23	True	AATAAA	-17	NA	36290214	36299759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_72112_28	chr17	+	1067	2	FSM	ENSMUSG00000092368.2	ENSMUST00000173900.2	1111	2	52	-8	52	8	multi-exon	FALSE	canonical	3	20	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTATTAGTCCACAGTTC	NA	False	NA	NA	False	ATTAAA	-27	NA	36305396	36349335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_36305453_36348324
Isoform_72115_172	chr17	+	3199	10	FSM	ENSMUSG00000024457.17	ENSMUST00000053434.15	3198	10	16	-17	-11	0	multi-exon	FALSE	canonical	3	153	junction_5	42.9366458349457	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTGGTGCTGTCTCT	NA	False	NA	30	True	AATAAA	-37	NA	37148053	37170289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_72118_60	chr17	+	3181	9	NIC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	63	junction_5	65.2246119191215	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148054	37170290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_72121_9	chr17	+	463	2	ISM	ENSMUSG00000024457.17	ENSMUST00000134325.8	4338	5	21	18175	-11	1	5prime_fragment	FALSE	canonical	3	108	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	37148053	37148748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_37148157_37148388
Isoform_72122_120	chr17	+	3167	10	FSM	ENSMUSG00000024457.17	ENSMUST00000130367.8	3187	10	20	0	-10	0	multi-exon	FALSE	canonical	3	108	junction_1	52.5084355362939	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148054	37170290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_72127_41	chr17	+	2606	9	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-11	-526	intron_retention	FALSE	canonical	3	63	junction_5	72.172969316774	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTGTGAAGGAAGTTTT	NA	False	NA	7	True	AATAAA	-17	NA	37148053	37169746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_72128_38	chr17	+	3150	9	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-11	0	intron_retention	FALSE	canonical	3	63	junction_5	72.172969316774	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148053	37170290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_7213_973	chr10	+	2047	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	31	3	-1	-3	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGAGTGCTGTCTGCT	NA	False	NA	9	True	AATAAA	-18	NA	80100848	80124239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
Isoform_72130_18	chr17	+	3092	9	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	29	junction_1	72.8807887923834	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTGGTGCTGTCTCT	NA	False	NA	30	True	AATAAA	-37	NA	37148052	37170289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37148157_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_72134_4	chr17	+	1867	4	FSM	ENSMUSG00000036492.13	ENSMUST00000040498.12	1579	4	137	-425	0	425	multi-exon	FALSE	canonical	2	2	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGGTTTTGCTGATTT	6994	False	NA	NA	False	AATAAA	-16	NA	37253946	37259303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37254343_37256065_37256089_37256295_37256388_37257947
Isoform_72135_124	chr17	+	969	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	8	-1	8	1	multi-exon	FALSE	canonical	0	0	junction_1	121.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	False	NA	18	True	AATAAA	-18	NA	37269491	37276515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37269595_37275248_37275325_37275725
Isoform_72136_3	chr17	+	1180	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	8	-212	8	209	multi-exon	FALSE	canonical	0	0	junction_1	121.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTGTTCTGGTTGTC	NA	False	NA	NA	False	AAAACA	-28	NA	37269491	37276726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37269595_37275248_37275325_37275725
Isoform_72138_10	chr17	+	1016	3	FSM	ENSMUSG00000036214.15	ENSMUST00000173814.2	1020	3	19	-15	19	12	multi-exon	FALSE	canonical	3	19	junction_1	112	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCATGTTTCTTCTGCGA	NA	False	NA	32	True	AATAAA	-32	NA	37269551	37276529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37269688_37275248_37275325_37275725
Isoform_72139_6	chr17	+	1076	3	FSM	ENSMUSG00000036214.15	ENSMUST00000173814.2	1020	3	-54	-2	-5	-1	multi-exon	FALSE	canonical	3	19	junction_1	112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGCTAATGGTACCAT	NA	False	NA	19	True	AATAAA	-19	NA	37269478	37276516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37269688_37275248_37275325_37275725
Isoform_7214_58	chr10	+	2077	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	1	3	1	-3	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGAGTGCTGTCTGCT	NA	False	NA	9	True	AATAAA	-18	NA	80100818	80124239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
Isoform_72140_10	chr17	+	1359	3	FSM	ENSMUSG00000036214.15	ENSMUST00000172672.8	652	3	-9	-698	-9	14	multi-exon	FALSE	canonical	3	30	junction_1	106.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTTCTTCTGCGATG	NA	False	NA	34	True	AATAAA	-34	NA	37269501	37276531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37269979_37275248_37275325_37275725
Isoform_72141_17	chr17	+	1307	3	FSM	ENSMUSG00000036214.15	ENSMUST00000172672.8	652	3	27	-682	5	1	multi-exon	FALSE	canonical	3	30	junction_1	106.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	False	NA	18	True	AATAAA	-18	NA	37269537	37276515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37269979_37275248_37275325_37275725
Isoform_72147_253	chr17	+	1728	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	19	2	-10	-2	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGGTCTTTGTATTTG	NA	False	NA	34	True	AATAAA	-39	NA	37313435	37321522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
Isoform_72150_27	chr17	+	1805	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	-61	5	-18	-5	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTGAGGTCTTTGTAT	NA	False	NA	31	True	AATAAA	-36	NA	37313355	37321519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
Isoform_7217_253	chr10	+	1572	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	8	501	8	14	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAACGCCTTCAGCTTT	NA	False	NA	27	True	AATAAA	-29	NA	80100825	80123741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
Isoform_72177_6	chr17	+	1601	4	FSM	ENSMUSG00000024462.18	ENSMUST00000174456.8	1595	4	-11	5	-3	-5	multi-exon	FALSE	canonical	3	45	junction_1	13.0213499897497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAATTGTTTTGTAATT	NA	False	NA	11	True	NA	NA	NA	37356908	37360354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312
Isoform_72180_3	chr17	+	4336	22	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	49	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	25.5127907985596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCACCTCATCCACTGT	NA	False	NA	29	True	AATAAA	-17	NA	37356968	37385185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37360544_37360690_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
Isoform_72181_3	chr17	+	4252	21	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	23.5424616384948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTCATCCACTGTCCTG	NA	False	NA	33	True	AATAAA	-21	NA	37356911	37385189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
Isoform_72183_4	chr17	+	1447	3	FSM	ENSMUSG00000024462.18	ENSMUST00000172789.2	1460	3	2	11	2	-11	multi-exon	FALSE	canonical	3	67	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAACCAATTGTTTT	NA	False	NA	5	True	NA	NA	NA	37357461	37360348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37357669_37358345_37358550_37359312
Isoform_72184_4	chr17	+	6484	19	NIC	ENSMUSG00000024462.18	novel	4204	21	NA	NA	10	0	intron_retention	FALSE	canonical	3	39	junction_6	19.2332177928361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGCACCTCATCCAC	NA	False	NA	26	True	AATAAA	-14	NA	37357469	37385182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37357669_37358345_37358550_37359312_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
Isoform_72185_6	chr17	+	3484	17	ISM	ENSMUSG00000024462.18	ENSMUST00000173823.8	4204	21	5001	-3	347	3	3prime_fragment	FALSE	canonical	3	39	junction_4	20.2623419179521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCACCTCATCCACTGT	NA	False	NA	29	True	AATAAA	-17	NA	37361912	37385185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
Isoform_72187_3	chr17	+	5932	16	NIC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	548	3	intron_retention	FALSE	canonical	3	39	junction_4	20.5279213647061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCACCTCATCCACTGT	NA	False	NA	29	True	AATAAA	-17	NA	37360017	37385185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
Isoform_72188_3	chr17	+	4422	16	NIC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	14	-2	intron_retention	FALSE	canonical	3	39	junction_4	20.5279213647061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCACTGTCCTGTGAAC	NA	False	NA	38	True	AATAAA	-26	NA	37361536	37385194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
Isoform_72194_9	chr17	+	1423	8	FSM	ENSMUSG00000016206.7	ENSMUST00000038580.7	1438	8	20	-5	20	5	multi-exon	FALSE	canonical	2	2	junction_3	3.09047252182628	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATGTGTTCAATGTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	37581130	37585380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_37581226_37581412_37581683_37581888_37582165_37583159_37583436_37583538_37583644_37584609_37584643_37584756_37584804_37585059
Isoform_72197_411	chr17	+	3338	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	5	331	5	-331	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTTGTAGTGTGATGT	NA	False	NA	13	True	AATAAA	-14	NA	41245580	41272548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
Isoform_72198_170	chr17	+	3636	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	40	-2	40	2	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTGTTGTGTGTTCCA	NA	False	NA	NA	False	TATAAA	-25	NA	41245615	41272881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
Isoform_72208_6	chr17	+	1683	2	FSM	ENSMUSG00000023915.6	ENSMUST00000233482.2	1659	2	-23	-1	-10	1	multi-exon	FALSE	canonical	3	155	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAGAAAAGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	43327435	43349620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_43327984_43348485
Isoform_72210_300	chr17	+	3623	6	FSM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	3	1	3	-1	multi-exon	FALSE	canonical	3	155	junction_1	28.3450171987953	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTTTTGGTATA	NA	False	NA	20	True	AATAAA	-16	NA	43327448	43400079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
Isoform_72212_26	chr17	+	3667	6	FSM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	-41	1	-41	-1	multi-exon	FALSE	canonical	3	155	junction_1	28.3450171987953	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTTTTGGTATA	NA	False	NA	20	True	AATAAA	-16	NA	43327404	43400079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
Isoform_72222_5	chr17	+	3356	5	FSM	ENSMUSG00000039601.17	ENSMUST00000229744.2	2914	5	10	-452	10	0	multi-exon	FALSE	canonical	2	8	junction_1	4.9180788932265	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTGGCATCATTTC	4903	False	NA	5	True	AATATA	-14	NA	44112744	44350403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_44112988_44147161_44147389_44328657_44328832_44331843_44332016_44347863
Isoform_72223_7	chr17	+	2433	4	FSM	ENSMUSG00000023960.14	ENSMUST00000154166.8	2490	4	50	7	-16	1	multi-exon	FALSE	canonical	1	1	junction_1	7.40870359029762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	44389753	44397451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_44389790_44391537_44392402_44393634_44393812_44396095
Isoform_72224_7	chr17	+	1620	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	17	3181	17	-3181	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGGAAGGCTGTTTC	NA	False	NA	4	True	AGTAAA	-22	NA	44389752	44394269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_44389874_44391537_44392402_44393634
Isoform_72225_3	chr17	+	3355	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	17	1446	17	-1446	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAAGGTCAGAACTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	44389752	44396004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_44389874_44391537_44392402_44393634
Isoform_72227_31	chr17	+	2498	4	FSM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	37	-1	3	1	multi-exon	FALSE	canonical	3	12	junction_3	7.40870359029762	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	44389772	44397451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_44389874_44391537_44392402_44393634_44393812_44396095
Isoform_72229_5	chr17	+	1361	12	FSM	ENSMUSG00000038954.15	ENSMUST00000127798.8	1180	12	-175	-6	69	2	multi-exon	FALSE	canonical	1	6	junction_10	31.9782984264006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGCCTGCTTTGTTTCT	NA	False	NA	28	True	AATAAA	-29	NA	45088107	45430179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352194_45359168_45359280_45430029
Isoform_72230_129	chr17	+	1442	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	64	2	64	-2	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGAGTGGCCTGCTTTGT	NA	False	NA	24	True	AATAAA	-25	NA	45088102	45430175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
Isoform_72231_45	chr17	+	1496	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	12	0	12	0	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGTGGCCTGCTTTGTTT	NA	False	NA	26	True	AATAAA	-27	NA	45088050	45430177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
Isoform_72234_28	chr17	+	6831	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	-6	-4247	-6	0	multi-exon	FALSE	canonical	3	41	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGATTGTTTTTCTGC	NA	False	NA	14	True	NA	NA	NA	45744784	45753470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45745154_45747008
Isoform_72237_277	chr17	+	3347	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	1	1	1	-1	multi-exon	TRUE	canonical	3	146	junction_8	22.4045468336421	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTGTGTGTGTGT	NA	False	NA	18	True	AATACA	-32	NA	45817767	45831768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
Isoform_72240_9	chr17	+	4464	23	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	223334	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_22	45.6789008566436	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATATTTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	45817767	46055103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211_45832762_46054979
Isoform_72241_14	chr17	+	3561	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	45.491620107444	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	NA	False	NA	19	True	AATACA	-33	NA	45817767	45831769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
Isoform_72251_56	chr17	+	2433	6	FSM	ENSMUSG00000023947.9	ENSMUST00000024742.9	2435	6	-1	3	-1	0	multi-exon	FALSE	canonical	3	12	junction_2	2.44948974278318	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTGGTTATACGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	45866627	45874092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872927
Isoform_72253_3	chr17	+	2380	6	FSM	ENSMUSG00000023947.9	ENSMUST00000233929.2	2356	6	-25	1	-17	-1	multi-exon	FALSE	canonical	0	0	junction_5	6.59090282131363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATGTGGTTATACGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	45866611	45874091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872995
Isoform_72257_11	chr17	+	1317	4	NIC	ENSMUSG00000037089.12	novel	850	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_3	193.511986421743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGCCAGCTCTAATGG	NA	False	NA	7	True	AATAAA	-16	NA	45874882	45876981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_45874995_45875505_45875700_45875850_45876006_45876125
Isoform_72258_32	chr17	+	853	4	FSM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	37	junction_3	186.912338335976	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGCCAGCTCTAATGG	NA	False	NA	7	True	AATAAA	-16	NA	45874882	45876981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45876589
Isoform_72259_581	chr17	+	1812	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	95	-1	5	0	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	False	NA	10	True	ATTAAA	-20	NA	45874894	45878597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
Isoform_72260_69	chr17	+	1994	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	83	-171	-3	170	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCACAATACATAACACCCA	NA	False	NA	NA	False	NA	NA	NA	45874882	45878767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
Isoform_72261_87	chr17	+	1841	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	64	1	-10	0	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874863	45878595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
Isoform_72263_11	chr17	+	2017	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	60	-171	-14	170	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCACAATACATAACACCCA	NA	False	NA	NA	False	NA	NA	NA	45874859	45878767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
Isoform_72266_13	chr17	+	2321	3	FSM	ENSMUSG00000037089.12	ENSMUST00000224559.2	2326	3	5	0	5	0	multi-exon	FALSE	canonical	3	396	junction_2	19	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874894	45878595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45875700_45875850_45876006_45877234
Isoform_72268_9	chr17	+	2472	2	NIC	ENSMUSG00000037089.12	novel	2326	3	NA	NA	5	0	intron_retention	FALSE	canonical	3	396	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874894	45878595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_45876006_45877234
Isoform_72269_219	chr17	+	619	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	26	0	-9	0	multi-exon	FALSE	canonical	3	814	junction_1	143	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	37	True	AATAAA	-26	NA	45997273	46009421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45997354_46006407_46006499_46008973
Isoform_72270_341	chr17	+	587	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	56	2	21	-2	multi-exon	FALSE	canonical	3	814	junction_1	143	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTCTGAGCTGTGAT	NA	False	NA	35	True	AATAAA	-24	NA	45997303	46009419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_45997354_46006407_46006499_46008973
Isoform_72272_23	chr17	+	681	2	FSM	ENSMUSG00000023939.8	ENSMUST00000148537.2	510	2	-78	-93	-78	-2	multi-exon	FALSE	canonical	3	1100	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTCTGAGCTGTGAT	NA	False	NA	35	True	AATAAA	-24	NA	46006263	46009419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46006499_46008973
Isoform_72275_17	chr17	+	3667	5	FSM	ENSMUSG00000023967.10	ENSMUST00000123646.2	621	5	-3	-3043	-2	-2	multi-exon	FALSE	canonical	3	1063	junction_2	42.9905512874632	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTGGTCAGTGCTTAG	NA	False	NA	17	True	AATAAA	-17	NA	46421918	46439834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568
Isoform_72277_940	chr17	+	860	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	22	2	12	-2	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTGGTCAGTGCTTAG	NA	False	NA	17	True	AATAAA	-17	NA	46421933	46439834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
Isoform_72282_4	chr17	+	2837	12	FSM	ENSMUSG00000023952.14	ENSMUST00000169383.8	2929	12	89	3	10	-3	multi-exon	FALSE	canonical	1	1	junction_1	18.651656696408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTCTGCTTATTCTTA	NA	False	NA	0	True	AATAAA	-13	NA	46472046	46480291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46472218_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
Isoform_72283_3	chr17	+	693	2	FSM	ENSMUSG00000023952.14	ENSMUST00000165686.2	608	2	-114	29	-2	-29	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	46471972	46473055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46472253_46472642
Isoform_72284_7	chr17	+	3134	11	ISM	ENSMUSG00000023952.14	ENSMUST00000172170.8	2587	13	51	-32	6	0	intron_retention	FALSE	canonical	3	39	junction_1	11.6464586892325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGCTTATTCTTAAGA	NA	False	NA	3	True	AATAAA	-16	NA	46472042	46480294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651
Isoform_72285_18	chr17	+	2946	12	FSM	ENSMUSG00000023952.14	ENSMUST00000024748.14	2966	12	16	4	-1	-2	multi-exon	TRUE	canonical	3	39	junction_1	11.1762735698931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCTGCTTATTCTTAA	NA	False	NA	1	True	AATAAA	-14	NA	46471973	46480292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
Isoform_72286_67	chr17	+	2883	12	FSM	ENSMUSG00000023952.14	ENSMUST00000024748.14	2966	12	81	2	2	0	multi-exon	FALSE	canonical	3	39	junction_1	11.1762735698931	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGCTTATTCTTAAGA	NA	False	NA	3	True	AATAAA	-16	NA	46472038	46480294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
Isoform_72288_3	chr17	+	2672	11	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	-7	0	intron_retention	FALSE	canonical	2	6	junction_6	18.422811946063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGCTTATTCTTAAGA	NA	False	NA	3	True	AATAAA	-16	NA	46472029	46480294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
Isoform_72289_3	chr17	+	2979	13	NNC	ENSMUSG00000023952.14	novel	2587	13	NA	NA	-18	-2	intron_retention	FALSE	canonical	0	0	junction_3	22.2991031209778	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCTGCTTATTCTTAA	NA	False	NA	1	True	AATAAA	-14	NA	46472068	46480292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_46472253_46474408_46474436_46474677_46474806_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
Isoform_72290_6	chr17	+	2797	12	NIC	ENSMUSG00000023952.14	novel	826	5	NA	NA	51	-2	intron_retention	FALSE	canonical	2	6	junction_1	17.4616462828993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCTGCTTATTCTTAA	NA	False	NA	1	True	AATAAA	-14	NA	46474009	46480292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_46474140_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
Isoform_72291_12	chr17	+	1967	5	FSM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	2	168	2	-168	multi-exon	FALSE	canonical	3	272	junction_2	19.3180614969515	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAATGTGGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	46513744	46520427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
Isoform_72296_281	chr17	+	3714	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	26	-1303	at_least_one_novel_splicesite	FALSE	non_canonical	2	141	junction_5	54.3802084950264	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	NA	False	NA	7	True	NA	NA	NA	46513768	46553218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547837_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
Isoform_72297_111	chr17	+	5105	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	141	junction_5	54.3802084950264	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513683	46554524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547837_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
Isoform_72298_147	chr17	+	5020	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	141	junction_5	54.3802084950264	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513768	46554524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547837_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
Isoform_72299_146	chr17	+	3791	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-16	-1303	at_least_one_novel_splicesite	FALSE	non_canonical	2	141	junction_5	54.3802084950264	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	NA	False	NA	7	True	NA	NA	NA	46513691	46553218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547837_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
Isoform_72300_15	chr17	+	5136	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	141	junction_5	54.3802084950264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513652	46554524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547837_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
Isoform_72301_23	chr17	+	3827	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-52	-1303	at_least_one_novel_splicesite	FALSE	non_canonical	2	141	junction_5	54.3802084950264	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	NA	False	NA	7	True	NA	NA	NA	46513655	46553218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547837_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
Isoform_7232_4649	chr10	+	493	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	7	0	7	0	multi-exon	FALSE	canonical	3	5732	junction_1	1157.99510649513	4649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6349	False	NA	30	True	AATAAA	-21	NA	80128293	80129948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
Isoform_72326_326	chr17	+	1482	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	33	520	-12	0	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	2613	False	NA	23	True	ATTAAA	-18	NA	46559038	46562943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
Isoform_72329_7	chr17	+	1629	8	FSM	ENSMUSG00000071074.10	ENSMUST00000151488.2	1570	8	-44	-15	21	-1	multi-exon	FALSE	canonical	3	158	junction_7	7.73542078324622	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTAGCTCCTGTTGG	2601	False	NA	22	True	ATTAAA	-17	NA	46559026	46562942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562414_46562491
Isoform_72336_33	chr17	+	7790	10	FSM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	2	5268	2	3435	multi-exon	FALSE	canonical	3	36	junction_4	9.25496196575947	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTTAAATCCATTTTT	NA	False	NA	29	True	AATAAA	-30	NA	46694658	46725682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559
Isoform_72338_4	chr17	+	3952	8	FSM	ENSMUSG00000015597.18	ENSMUST00000138127.8	3936	8	-23	7	-3	-7	multi-exon	FALSE	canonical	0	0	junction_7	19.5948764648688	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGTGAGCTTCTATT	NA	False	NA	NA	False	AATAAA	-14	NA	46694653	46731839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46731340
Isoform_72339_299	chr17	+	588	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	49	553	49	-553	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTTTAACTACATGTAT	NA	False	NA	12	True	NA	NA	NA	46807685	46809997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
Isoform_72340_271	chr17	+	1140	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	50	0	50	0	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCACGGTGTC	NA	False	NA	14	True	NA	NA	NA	46807686	46810550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
Isoform_72347_2170	chr17	+	1018	7	FSM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	13	0	-1	0	multi-exon	FALSE	canonical	3	984	junction_4	70.4430423975443	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957167	46961058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
Isoform_72348_71	chr17	+	1040	7	FSM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	984	junction_4	70.4430423975443	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957145	46961058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
Isoform_72349_64	chr17	+	1007	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	-8	-1	-1	0	multi-exon	FALSE	canonical	3	97	junction_4	389.469903273097	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957167	46961058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959960_46960035_46960809
Isoform_7235_73	chr10	+	764	3	FSM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	-167	-25	25	-2	multi-exon	FALSE	canonical	3	7729	junction_2	373	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGGTTTTTGTTTTT	6367	False	NA	28	True	AATAAA	-19	NA	80128311	80129946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80128695_80129475_80129711_80129800
Isoform_72362_84	chr17	+	5242	26	FSM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	288	0	53	0	multi-exon	FALSE	canonical	3	53	junction_11	16.0216853046114	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATGGGACTGCTA	NA	False	NA	19	True	AATAAA	-20	NA	46961550	46975290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
Isoform_72363_43	chr17	+	5272	26	FSM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	258	0	23	0	multi-exon	FALSE	canonical	3	53	junction_11	16.0216853046114	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATGGGACTGCTA	NA	False	NA	19	True	AATAAA	-20	NA	46961520	46975290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
Isoform_72364_5	chr17	+	5539	26	FSM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	-9	0	-9	0	multi-exon	TRUE	canonical	3	53	junction_11	16.0216853046114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATGGGACTGCTA	NA	False	NA	19	True	AATAAA	-20	NA	46961253	46975290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
Isoform_72372_3	chr17	+	2298	11	ISM	ENSMUSG00000038545.14	ENSMUST00000133393.8	4047	21	6037	2	-2857	-2	3prime_fragment	FALSE	canonical	3	60	junction_4	16.1629205281719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCTGTATGGGACTGC	NA	False	NA	17	True	AATAAA	-18	NA	46969855	46975288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
Isoform_72375_10	chr17	+	802	4	FSM	ENSMUSG00000002768.9	ENSMUST00000232732.2	748	4	14	-68	14	3	multi-exon	FALSE	canonical	3	20	junction_1	423.826222249953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACACCGCCTGTGCTCCT	NA	False	NA	-1	True	AATAAA	-24	NA	46991397	46994031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46991429_46992542_46992824_46992934_46993038_46993644
Isoform_72377_25	chr17	+	800	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233491.2	673	4	106	-233	-15	-2	multi-exon	FALSE	canonical	3	42	junction_1	413.462076723959	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCCTGTGCTCCTGAAT	NA	False	NA	3	True	AATAAA	-28	NA	46992034	46994035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46992060_46992542_46992824_46992934_46993038_46993644
Isoform_72378_439	chr17	+	813	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	139	-7	1	-2	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCCTGTGCTCCTGAAT	NA	False	NA	3	True	AATAAA	-28	NA	46992050	46994035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
Isoform_72383_69	chr17	+	817	4	FSM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	33	9	-23	0	multi-exon	FALSE	canonical	3	90	junction_1	390.850639275699	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCACACCGCCTGTGCT	NA	False	NA	-4	True	AATAAA	-21	NA	46992082	46994028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46992132_46992542_46992824_46992934_46993038_46993644
Isoform_72385_8	chr17	+	884	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233612.2	766	4	-23	-95	-23	0	multi-exon	FALSE	canonical	3	19	junction_1	424.297327616169	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCACACCGCCTGTGCT	NA	False	NA	-4	True	AATAAA	-21	NA	46992082	46994028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_46992199_46992542_46992824_46992934_46993038_46993644
Isoform_72389_371	chr17	+	3173	17	FSM	ENSMUSG00000002763.17	ENSMUST00000002840.9	3200	17	27	0	14	0	multi-exon	FALSE	canonical	3	74	junction_1	12.2574913318346	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	False	NA	11	True	AATAAA	-18	NA	47022415	47036467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
Isoform_72392_4	chr17	+	3419	15	NIC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	5	-2	intron_retention	TRUE	canonical	3	74	junction_1	13.0054933448469	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTCTTGTGAGAGGTT	NA	False	NA	9	True	AATAAA	-16	NA	47022406	47036465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035891_47036113
Isoform_72397_14	chr17	+	1255	9	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	777.973127749282	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7139	False	NA	5	True	NA	NA	NA	47679813	47689604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_47679880_47680953_47681084_47681188_47681296_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_72398_31	chr17	+	1245	9	NIC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	774.837634201515	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7146	False	NA	5	True	NA	NA	NA	47679820	47689604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_47679880_47680953_47681084_47681188_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_72400_16	chr17	+	1117	8	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	734.648576267759	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7146	False	NA	7	True	NA	NA	NA	47679820	47689606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_47679880_47681188_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_72401_672	chr17	+	1012	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119945.8	1018	7	5	1	-2	1	multi-exon	FALSE	canonical	3	774	junction_2	381.394116659162	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGGTTTTGTTTAC	7146	False	NA	6	True	NA	NA	NA	47679820	47689605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_72405_14	chr17	+	856	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	11	150	0	-149	multi-exon	FALSE	canonical	3	977	junction_2	314.646892034018	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGCGCTGCTGACTTC	7148	False	NA	NA	False	TTTAAA	-5	NA	47679822	47689454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_72407_29	chr17	+	1090	6	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1493	junction_5	178.399103136759	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCTGGCTGGTTTTGTT	7146	False	NA	3	True	NA	NA	NA	47679820	47689602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_47679880_47683351_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_72410_13	chr17	+	1083	8	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	735.935528453965	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7154	False	NA	5	True	NA	NA	NA	47679828	47689604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_47679880_47681212_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_72412_12	chr17	+	2422	7	NIC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_1	627.511487278653	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7148	False	NA	5	True	NA	NA	NA	47679822	47689604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_72413_9	chr17	+	992	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	25	0	14	0	multi-exon	FALSE	canonical	3	977	junction_2	314.646892034018	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7162	False	NA	5	True	NA	NA	NA	47679836	47689604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_72415_42	chr17	+	1671	4	FSM	ENSMUSG00000023979.15	ENSMUST00000024774.14	1668	4	-4	1	-4	-1	multi-exon	FALSE	canonical	3	16	junction_3	4.64279609239471	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTGTCCTGGAGGTGA	1126	False	NA	NA	False	ATTAAA	-14	NA	47696313	47703891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47696622_47700034_47700185_47701905_47702027_47702799
Isoform_72416_14	chr17	+	1406	2	ISM	ENSMUSG00000034382.15	ENSMUST00000150819.3	4866	5	31505	501	31505	-7	3prime_fragment	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCATCCTGGTTTGTGT	NA	False	NA	26	True	AATATA	-16	NA	47779234	47781062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_47779779_47780200
Isoform_7243_29	chr10	+	2906	4	FSM	ENSMUSG00000035504.17	ENSMUST00000153167.2	848	4	-50	-2008	3	0	multi-exon	FALSE	canonical	3	516	junction_3	38.0029238641216	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGTCCGCTAAGCT	7222	False	NA	17	True	AATAAA	-18	NA	80165981	80172274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799
Isoform_72431_10364	chr17	+	1949	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	26	2	26	-2	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	10364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGGCTCTTGTGATCCC	NA	False	NA	NA	False	AATAAA	-13	NA	47904420	47910612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
Isoform_72432_1037	chr17	+	1993	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	-19	3	15	3	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGCTCTTGTGATCC	NA	False	NA	NA	False	AATAAA	-12	NA	47904375	47910611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
Isoform_7244_16	chr10	+	2014	6	FSM	ENSMUSG00000035504.17	ENSMUST00000186864.7	2015	6	2	-1	2	0	multi-exon	FALSE	canonical	3	14	junction_4	273.806939283868	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7221	False	NA	18	True	AATAAA	-19	NA	80165980	80172275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170546_80170628_80170943
Isoform_7245_682	chr10	+	1935	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	192	0	0	0	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7219	False	NA	18	True	AATAAA	-19	NA	80165978	80172275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
Isoform_72456_5	chr17	+	5694	3	FSM	ENSMUSG00000092558.4	ENSMUST00000138638.2	5680	3	-11	-3	-11	3	multi-exon	FALSE	canonical	3	195	junction_2	38	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTTGGCCTTCTGGTCT	NA	False	NA	11	True	AATAAA	-16	NA	47922521	47935176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47922618_47923887_47924043_47929733
Isoform_72457_356	chr17	+	1880	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	7	167	4	3	multi-exon	FALSE	canonical	3	195	junction_2	32.2937902527543	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTTGGCCTTCTGGTCT	NA	False	NA	11	True	AATAAA	-16	NA	47922513	47935176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
Isoform_72458_7	chr17	+	1627	3	NIC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	133.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCGTTTTGGCCTTCTGGT	NA	False	NA	9	True	AATAAA	-14	NA	47922510	47935174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_47922618_47923887_47924043_47933809
Isoform_72459_6	chr17	+	604	3	FSM	ENSMUSG00000023984.18	ENSMUST00000146105.8	599	3	0	-5	0	5	multi-exon	FALSE	canonical	3	27	junction_2	122	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTATTGTCCAGAACT	NA	False	NA	NA	False	AATAAA	-17	NA	47922513	47961219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47922618_47923887_47924043_47960874
Isoform_72460_5	chr17	+	2608	8	NIC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	-1	-2792	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	76.6638567955951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCAGTTGC	NA	False	NA	19	True	TATAAA	-16	NA	47922521	47991994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_47922618_47923887_47924043_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
Isoform_72464_7	chr17	+	1502	5	FSM	ENSMUSG00000090115.8	ENSMUST00000152724.2	1443	5	-45	-14	-45	14	multi-exon	FALSE	canonical	3	25	junction_4	46.8794997840207	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTTTTGTCAGTTGCT	NA	False	NA	20	True	TATAAA	-17	NA	47983599	47991995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
Isoform_72465_3	chr17	+	2032	7	NNC	ENSMUSG00000090115.8	novel	8252	7	NA	NA	-541	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.1233159861195	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTTTTGTCAGTTGCT	NA	False	NA	20	True	TATAAA	-17	NA	47983103	47991995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_47983619_47983653_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47990725_47990795_47991606
Isoform_72467_10	chr17	+	2128	5	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	41513	5665	-517	17	3prime_fragment	FALSE	canonical	3	71	junction_4	30.9141957682874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTCAGTTGCTTCT	NA	False	NA	23	True	TATAAA	-20	NA	47983127	47991998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
Isoform_72471_3	chr17	+	4682	5	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	41953	2671	-77	-2671	3prime_fragment	FALSE	canonical	3	71	junction_4	30.9141957682874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTTGTTCACTGCCTT	NA	False	NA	4	True	NA	NA	NA	47983567	47994992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
Isoform_72472_109	chr17	+	2160	7	FSM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	-17	1	-17	1	multi-exon	FALSE	canonical	3	46	junction_5	11.8988794990677	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	AATATA	-18	NA	48006105	48015210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
Isoform_72474_9	chr17	+	2314	7	FSM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	-168	-2	-168	2	multi-exon	FALSE	canonical	3	46	junction_5	11.8988794990677	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGAGTGCTCTCGTCTGT	NA	False	NA	NA	False	AATATA	-21	NA	48005954	48015213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
Isoform_72475_6	chr17	+	2250	8	NNC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	30.9970373831212	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGTGAGTGCTCTCG	NA	False	NA	NA	False	AATATA	-16	NA	48006111	48015208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48011305_48011404_48012547_48012710_48013494_48013650_48013878
Isoform_72477_3	chr17	+	4646	6	NNC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_3	29.3025596151599	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGTGAGTGCTCTCG	NA	False	NA	NA	False	AATATA	-16	NA	48006131	48015208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_48006198_48008115_48008259_48009497_48009587_48009846_48012710_48013494_48013650_48013878
Isoform_72479_15	chr17	+	1435	9	FSM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	-47	0	-47	0	multi-exon	FALSE	canonical	3	26	junction_3	162.479181358721	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48037719	48045407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48037890_48039666_48039827_48040176_48040295_48041018_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_72480_23	chr17	+	944	6	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3296	-1	3294	1	3prime_fragment	FALSE	canonical	3	54	junction_1	149.361842516755	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48041062	48045408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_72481_52	chr17	+	694	5	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3932	-1	3930	1	3prime_fragment	FALSE	canonical	3	133	junction_1	119.423615755009	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48041698	48045408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_72482_7	chr17	+	898	5	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3727	0	3725	0	3prime_fragment	FALSE	canonical	3	133	junction_1	119.423615755009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48041493	48045407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_72486_12	chr17	+	1588	4	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	4624	-1	4622	1	3prime_fragment	FALSE	canonical	3	283	junction_1	65.5303152916436	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48042390	48045408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_72489_3	chr17	+	868	3	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	5800	-1	5798	1	3prime_fragment	FALSE	canonical	3	421	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48043566	48045408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_48044037_48044681_48044781_48045109
Isoform_72491_13	chr17	+	786	3	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	5882	-1	5880	1	3prime_fragment	FALSE	canonical	3	421	junction_1	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48043648	48045408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_48044037_48044681_48044781_48045109
Isoform_72492_2290	chr17	+	2312	9	FSM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	27	3	27	0	multi-exon	FALSE	canonical	3	431	junction_4	27.2370955683604	2290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	15	True	AGTAAA	-15	NA	48047981	48103341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
Isoform_72493_497	chr17	+	2345	9	FSM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	-6	3	-6	0	multi-exon	FALSE	canonical	3	431	junction_4	27.2370955683604	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	15	True	AGTAAA	-15	NA	48047948	48103341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
Isoform_72498_60	chr17	+	2358	9	NIC	ENSMUSG00000023990.19	novel	2296	8	NA	NA	760	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	141.519378090069	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	15	True	AGTAAA	-15	NA	48050587	48103341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_48050894_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
Isoform_72499_98	chr17	+	2143	9	NIC	ENSMUSG00000023990.19	novel	2296	8	NA	NA	975	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	141.519378090069	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	15	True	AGTAAA	-15	NA	48050802	48103341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_48050894_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
Isoform_7250_15	chr10	+	2066	15	FSM	ENSMUSG00000035486.15	ENSMUST00000105351.2	2100	15	28	6	28	-6	multi-exon	FALSE	canonical	1	5	junction_11	2.25876975726313	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCTGCTTCCTTT	NA	False	NA	8	True	AATAAA	-14	NA	80192320	80201317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80192502_80193817_80193926_80194075_80194193_80194620_80194751_80195075_80195164_80195243_80195340_80195988_80196188_80196273_80196401_80196519_80196597_80196955_80197029_80197237_80197316_80198842_80199000_80199849_80199980_80200056_80200168_80200923
Isoform_72514_279	chr17	+	1159	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	-34	10	32	2	multi-exon	FALSE	canonical	0	0	junction_5	381.26547181721	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717073	48724284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_72517_135	chr17	+	1162	6	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	32	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	404.287818268124	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717073	48724284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_48717266_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_72519_15	chr17	+	2450	5	ISM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	229	-5	151	5	intron_retention	FALSE	canonical	3	324	junction_1	247.498863633755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	14	True	AATAAA	-22	NA	48717270	48724287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248
Isoform_7252_106	chr10	+	1393	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	12	6	-4	-6	multi-exon	TRUE	canonical	3	56	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGTTGCCGTTTGCAC	NA	False	NA	-3	True	AATAAA	-9	NA	80438725	80443482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80438784_80442147
Isoform_72521_175	chr17	+	1298	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	31	-5	31	5	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	14	True	AATAAA	-22	NA	48717072	48724287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_72523_181	chr17	+	1111	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	230	-17	152	5	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGTCTGTGTTCTGGAT	NA	False	NA	26	True	AATAAA	-34	NA	48717271	48724299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_72527_134	chr17	+	1102	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	152	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	403.460233480327	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	14	True	AATAAA	-22	NA	48717271	48724287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_72528_85	chr17	+	1311	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	31	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	403.460233480327	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAACGTCTGTGTTCTGG	NA	False	NA	24	True	AATAAA	-32	NA	48717072	48724297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_7253_28	chr10	+	4276	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-4	1	intron_retention	FALSE	canonical	3	56	junction_1	229.039601136766	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438731	80451618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80438784_80442147_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_72534_30	chr17	+	2833	9	FSM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	0	5	0	1	multi-exon	FALSE	canonical	1	5	junction_1	7.66383552798467	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATACTGGTACTTTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	48761928	48775709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48762001_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
Isoform_72536_9	chr17	+	3371	9	FSM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	-539	6	-539	0	multi-exon	TRUE	canonical	1	5	junction_1	7.66383552798467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATACTGGTACTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	48761389	48775708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_48762001_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
Isoform_72538_38	chr17	+	2618	11	FSM	ENSMUSG00000064120.15	ENSMUST00000173033.8	2588	11	-35	5	11	-2	multi-exon	FALSE	canonical	3	5	junction_10	9.4387499172295	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGATTGGGGACTCTT	NA	False	NA	4	True	AATAAA	-20	NA	49735402	49762458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759871_49761057
Isoform_72539_51	chr17	+	2633	11	FSM	ENSMUSG00000064120.15	ENSMUST00000024797.16	2646	11	11	2	11	-2	multi-exon	FALSE	canonical	3	15	junction_10	7.06328535456412	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGATTGGGGACTCTT	NA	False	NA	4	True	AATAAA	-20	NA	49735402	49762458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057
Isoform_72541_48	chr17	+	3635	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	146	404	146	-404	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50816576	50995108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_72543_13	chr17	+	3897	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	-116	404	-116	-404	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50816314	50995108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_72545_16	chr17	+	4043	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	145	-3	145	3	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCAGTACATGCTTTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	50816575	50995515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_72546_7	chr17	+	4067	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	109	9	109	-9	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTTCTCCAATAGCAG	NA	False	NA	NA	False	ATTAAA	-12	NA	50816539	50995503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_72548_3	chr17	+	4010	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	-231	406	-231	-406	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGGCCCAAACATGCT	NA	False	NA	NA	False	AATAAA	-19	NA	50816199	50995106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_72551_1574	chr17	+	2357	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	1	8	1	-8	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAACACTGAGTTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	53786262	53814700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
Isoform_72553_46	chr17	+	2389	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	-23	0	-23	0	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	53786238	53814708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
Isoform_7256_40	chr10	+	1758	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	238.087285581477	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438726	80451618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80438784_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_72560_20	chr17	+	2397	7	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	414.185948578655	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAACACTGAGTTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	53786283	53814700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_53786637_53790247_53790309_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
Isoform_72569_330	chr17	+	4330	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	323	0	323	0	multi-exon	FALSE	canonical	3	180	junction_6	30.0116471047111	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874321	53979748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
Isoform_7257_870	chr10	+	1792	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	13	-1	1	1	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438726	80451618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_72575_19	chr17	+	4626	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	25	2	25	-2	multi-exon	FALSE	canonical	3	180	junction_6	30.0116471047111	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53874023	53979746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
Isoform_7259_16	chr10	+	1966	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_6	283.291801677986	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438723	80451618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449731_80449903_80450437
Isoform_72595_19	chr17	+	2148	5	FSM	ENSMUSG00000003198.11	ENSMUST00000224379.2	895	5	11	-1264	11	1	multi-exon	FALSE	canonical	3	14	junction_1	13.1624465810882	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATTTATGTGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	56199103	56205929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56199187_56199757_56199861_56202820_56202948_56203140_56203202_56204155
Isoform_72596_13	chr17	+	2044	4	FSM	ENSMUSG00000003198.11	ENSMUST00000054780.10	2028	4	-15	-1	12	1	multi-exon	FALSE	canonical	3	9	junction_1	17.3781471969828	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATTTATGTGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	56199104	56205929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56199187_56202820_56202948_56203140_56203202_56204155
Isoform_72597_7	chr17	+	936	3	ISM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-11	5531	-9	26	5prime_fragment	FALSE	canonical	3	151	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAG	333	False	NA	NA	False	NA	NA	NA	56266162	56269754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_56266262_56267712_56267814_56269018
Isoform_72598_160	chr17	+	1676	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-18	2	-16	2	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCGTGTTGGAGTCTG	326	False	NA	6	True	NA	NA	NA	56266155	56275283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
Isoform_726_4950	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4950	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4002_+_0_4000
Isoform_72600_28	chr17	+	1708	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-50	2	25	2	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCGTGTTGGAGTCTG	294	False	NA	6	True	NA	NA	NA	56266123	56275283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
Isoform_72601_25	chr17	+	1405	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-80	335	-5	-331	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTCGTGCTGTTTAAA	264	False	NA	12	True	AATACA	-28	NA	56266093	56274950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
Isoform_72603_5	chr17	+	1882	12	ISM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	-2	0	0	0	intron_retention	FALSE	canonical	3	53	junction_3	5.69035721982866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3931	False	NA	6	True	AATAAA	-16	NA	56293508	56303881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420
Isoform_72604_87	chr17	+	1748	13	FSM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	6.07533721057706	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3933	False	NA	6	True	AATAAA	-16	NA	56293510	56303881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
Isoform_72605_3	chr17	+	1964	12	NIC	ENSMUSG00000011589.10	novel	1748	13	NA	NA	-30	0	intron_retention	FALSE	canonical	3	52	junction_11	6.33891301264012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3901	False	NA	6	True	AATAAA	-16	NA	56293478	56303881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
Isoform_72606_24	chr17	+	2197	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	-625	129	-625	8	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCCTGTGGCTGGG	NA	False	NA	17	True	AATAAA	-17	NA	56315575	56323661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_72608_219	chr17	+	1675	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	16	10	9	-10	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATTAGGAGTAC	NA	False	NA	136	True	NA	NA	NA	56316216	56323780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_72609_994	chr17	+	1557	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	16	128	9	9	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAAGCCTGTGGCTGGGG	NA	False	NA	18	True	AATAAA	-18	NA	56316216	56323662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_72611_25	chr17	+	1632	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	6	9	intron_retention	FALSE	canonical	3	665	junction_1	102.378167868928	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAAGCCTGTGGCTGGGG	NA	False	NA	18	True	AATAAA	-18	NA	56316213	56323662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_72613_19	chr17	+	1301	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	8	9	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	267.709507050626	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAAGCCTGTGGCTGGGG	NA	False	NA	18	True	AATAAA	-18	NA	56316215	56323662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56316257_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_7262_14	chr10	+	1752	6	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	254.352039504306	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438718	80451618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80438784_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_72626_1316	chr17	+	3305	15	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-49	-805	at_least_one_novel_splicesite	FALSE	non_canonical	3	209	junction_1	81.0012597533684	1316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	21	True	TATAAA	-15	NA	56347389	56375027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_56347464_56347493_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
Isoform_72628_38	chr17	+	3410	15	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-153	-804	at_least_one_novel_splicesite	TRUE	non_canonical	3	209	junction_1	81.0012597533684	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCTGTCTCAA	NA	False	NA	22	True	TATAAA	-16	NA	56347285	56375028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_56347464_56347493_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
Isoform_7263_15	chr10	+	1357	3	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	combination_of_known_splicesites	TRUE	canonical	2	9	junction_1	345	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80438784_80448175_80448294_80450437
Isoform_7264_14	chr10	+	1797	7	FSM	ENSMUSG00000113949.2	ENSMUST00000180350.3	1271	7	295	-821	295	1	multi-exon	FALSE	canonical	3	35	junction_1	236.742945453972	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80439085	80451618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80439148_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_72640_22	chr17	+	2526	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-52	-805	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	133.669030527726	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	21	True	TATAAA	-15	NA	56347386	56375027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56347552_56351061_56351113_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
Isoform_7266_15	chr10	+	2029	7	NIC	ENSMUSG00000035370.10	novel	4517	6	NA	NA	-239	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	244.454097031642	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80442409	80451618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80442704_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_72661_442	chr17	+	2274	16	FSM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	-37	1	24	1	multi-exon	FALSE	canonical	3	148	junction_6	179.285421108974	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386661	56407597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_72663_165	chr17	+	2272	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	3	148	junction_6	209.929787204092	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386660	56407597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
Isoform_72665_1006	chr17	+	2247	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	27	-4	23	0	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_72668_506	chr17	+	2245	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	3	309	junction_15	154.811225547618	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386660	56407597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
Isoform_72671_118	chr17	+	2245	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	3	66	junction_6	198.047873000444	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386660	56407597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_72672_44	chr17	+	2240	16	FSM	ENSMUSG00000002833.12	ENSMUST00000002911.10	2264	16	24	0	24	0	multi-exon	FALSE	canonical	3	66	junction_6	225.638196136105	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386661	56407596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
Isoform_72673_45	chr17	+	2818	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	0	intron_retention	FALSE	canonical	3	635	junction_14	77.6569181642918	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_72686_59	chr17	+	2355	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	20	1	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	208.4942205434	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56388443	56407597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_72697_8	chr17	+	1403	2	FSM	ENSMUSG00000044469.9	ENSMUST00000077788.7	2379	2	43	933	43	-933	multi-exon	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTGTCACCAAACTTGT	456	False	NA	NA	False	AATAAA	-32	NA	56469519	56480022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56469607_56478706
Isoform_7270_656	chr10	+	2382	12	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-123	-8	combination_of_known_junctions	FALSE	canonical	3	537	junction_4	57.9097331204578	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAACATCCCAGAATGTT	NA	False	NA	1	True	GGGGCT	-28	NA	80458548	80476567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
Isoform_72701_2756	chr17	+	3514	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	72	0	-7	0	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	2756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	492	False	NA	36	True	AATAAA	-20	NA	56610392	56630486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72703_606	chr17	+	3565	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	21	0	21	0	multi-exon	TRUE	canonical	3	1413	junction_6	319.856779473251	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	441	False	NA	36	True	AATAAA	-20	NA	56610341	56630486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72713_573	chr17	+	3488	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	-7	2	-7	-2	multi-exon	FALSE	canonical	3	348	junction_6	505.023262923353	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	492	False	NA	34	True	AATAAA	-18	NA	56610392	56630484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72714_265	chr17	+	3512	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	-29	0	-29	0	multi-exon	FALSE	canonical	3	348	junction_6	505.023262923353	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	470	False	NA	36	True	AATAAA	-20	NA	56610370	56630486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72723_186	chr17	+	3527	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	539.303830038087	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	470	False	NA	36	True	AATAAA	-20	NA	56610370	56630486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72724_232	chr17	+	3454	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	539.303830038087	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	543	False	NA	36	True	AATAAA	-20	NA	56610443	56630486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72733_1129	chr17	+	3391	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72734_285	chr17	+	3470	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	-79	0	-44	0	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1368	False	NA	36	True	AATAAA	-20	NA	56611268	56630486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72741_274	chr17	+	3366	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113035.8	3402	17	36	0	1	0	multi-exon	FALSE	canonical	3	348	junction_6	590.514232338011	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1448	False	NA	36	True	AATAAA	-20	NA	56611348	56630486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72746_145	chr17	+	3381	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	617.393054377639	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1448	False	NA	36	True	AATAAA	-20	NA	56611348	56630486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_72809_9	chr17	+	2091	10	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	-16	819	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	53.4228415567723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAGAAAAAAAAAAA	4881	False	NA	NA	False	NA	NA	NA	56633045	56693938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082
Isoform_72810_6	chr17	+	1787	12	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	4	3656	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	48.5541360980855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGGCACCGTGTCCCA	4901	False	NA	NA	False	NA	NA	NA	56633065	56696775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484
Isoform_72811_40	chr17	+	4694	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	37.0128981759057	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGTCATGGCTGTGT	4900	False	NA	11	True	ATTAAA	-27	NA	56633064	56709863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_72813_17	chr17	+	4675	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	40.7135319325118	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4900	False	NA	13	True	ATTAAA	-29	NA	56633064	56709865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_72815_9	chr17	+	4700	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-27	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	44.1044901245819	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4870	False	NA	14	True	ATTAAA	-30	NA	56633034	56709866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_72816_39	chr17	+	1972	9	ISM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-9	15917	3	828	5prime_fragment	FALSE	canonical	3	116	junction_1	20.6321957144653	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4900	False	NA	NA	False	NA	NA	NA	56633064	56693947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082
Isoform_72817_4	chr17	+	1686	11	ISM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-9	13082	3	3663	5prime_fragment	FALSE	canonical	3	116	junction_1	21.7954123613204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGTGTCCCAGCTTTCT	4900	False	NA	NA	False	NA	NA	NA	56633064	56696782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484
Isoform_72818_4	chr17	+	4818	22	ISM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-9	-2	3	2	intron_retention	FALSE	canonical	3	94	junction_12	23.3393578228444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4900	False	NA	14	True	ATTAAA	-30	NA	56633064	56709866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222
Isoform_72819_119	chr17	+	4589	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-9	-3	3	3	multi-exon	FALSE	canonical	3	94	junction_12	23.0595707170123	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCATGGCTGTGTCTTC	4900	False	NA	15	True	ATTAAA	-31	NA	56633064	56709867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_7282_207	chr10	+	2459	11	FSM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	-119	8	-119	-8	multi-exon	FALSE	canonical	3	651	junction_8	40.2685981876698	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAACATCCCAGAATGTT	NA	False	NA	1	True	GGGGCT	-28	NA	80458552	80476567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
Isoform_72821_7	chr17	+	5506	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-20	-909	-8	903	multi-exon	FALSE	canonical	3	94	junction_12	23.0595707170123	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACTGTGACATCATTGG	4889	False	NA	NA	False	AATAAA	-17	NA	56633053	56710773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_72822_16	chr17	+	4570	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	2	17	junction_13	35.4617708255333	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4900	False	NA	14	True	ATTAAA	-30	NA	56633064	56709866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_72823_43	chr17	+	4567	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	29.4305457780414	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4900	False	NA	14	True	ATTAAA	-30	NA	56633064	56709866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_72825_8	chr17	+	4549	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	2	17	junction_13	39.6349040598651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4900	False	NA	14	True	ATTAAA	-30	NA	56633064	56709866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_72826_16	chr17	+	4545	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	34.4730401309163	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTCCTATTCCCACCTG	4900	False	NA	-2	True	ATTAAA	-14	NA	56633064	56709850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_72831_52	chr17	+	3155	22	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	42	0	combination_of_known_junctions	TRUE	canonical	3	80	junction_1	120.113627231518	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7870	False	NA	35	True	AATAAA	-26	NA	56891866	56913294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_72832_90	chr17	+	3038	22	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	120.113627231518	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7987	False	NA	35	True	AATAAA	-26	NA	56891983	56913294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_72838_59	chr17	+	3166	21	FSM	ENSMUSG00000071054.13	ENSMUST00000182533.8	3122	21	31	-75	23	0	multi-exon	FALSE	canonical	3	97	junction_18	119.307543768196	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	8008	False	NA	35	True	AATAAA	-26	NA	56892004	56913294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
Isoform_72842_847	chr17	+	3181	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	-75	0	2	0	multi-exon	FALSE	canonical	3	422	junction_6	66.4862955803675	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7987	False	NA	35	True	AATAAA	-26	NA	56891983	56913294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_72843_102	chr17	+	3251	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	-145	0	-60	0	multi-exon	FALSE	canonical	3	422	junction_6	66.4862955803675	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7917	False	NA	35	True	AATAAA	-26	NA	56891913	56913294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_72846_14	chr17	+	3212	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	-54	-52	23	52	multi-exon	FALSE	canonical	3	422	junction_6	66.4862955803675	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGGTGATGCCTATTC	8008	False	NA	87	True	NA	NA	NA	56892004	56913346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_72850_29	chr17	+	2606	20	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_6	132.182992439666	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	35	True	AATAAA	-26	NA	56891981	56913294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_72876_8511	chr17	+	386	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	0	-3	0	3	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	8511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920415	56921246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
Isoform_72877_357	chr17	+	416	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	-30	-3	-30	3	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920385	56921246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
Isoform_72881_173	chr17	+	495	3	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	28	3	intron_retention	FALSE	canonical	3	9970	junction_2	629.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920443	56921246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56920681_56920906_56921042_56921123
Isoform_72886_23	chr17	+	2690	18	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	149.65172948686	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGACTCTTTTGCAC	NA	False	NA	NA	False	ATTAAA	-13	NA	56980378	57018763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56980412_56993005_56993062_56998744_56998883_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_72887_48	chr17	+	2648	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	-84	3	-13	-3	multi-exon	FALSE	canonical	3	89	junction_2	111.513574706176	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980280	57018761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_72888_301	chr17	+	2547	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	18	2	-1	-2	multi-exon	FALSE	canonical	3	89	junction_2	111.513574706176	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980382	57018762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_72893_945	chr17	+	2362	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	9	2	0	-2	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980366	57018762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_72894_236	chr17	+	2448	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	-77	2	-13	-2	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980280	57018762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_72895_111	chr17	+	2501	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	-130	2	-66	-2	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980227	57018762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_72899_23	chr17	+	2975	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	1	-2	intron_retention	FALSE	canonical	3	371	junction_2	28.0978610559304	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980365	57018762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_72907_29	chr17	+	2269	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	98.1330833145292	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980366	57018762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_72928_1806	chr17	+	507	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	45	-7	14	3	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAAAGGCAGGCTTGCTG	NA	False	NA	25	True	AATAAA	-25	NA	57024811	57029144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
Isoform_72929_48	chr17	+	556	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	-10	-1	-10	1	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTCTTAAAGGCAGGC	NA	False	NA	19	True	AATAAA	-19	NA	57024756	57029138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
Isoform_72931_32	chr17	+	485	4	FSM	ENSMUSG00000002379.8	ENSMUST00000233832.2	493	4	4	4	0	0	multi-exon	FALSE	canonical	3	181	junction_2	1185.6477835625	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	NA	False	NA	18	True	AATAAA	-18	NA	57024786	57029137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57024943_57028034_57028128_57028358_57028442_57028984
Isoform_72934_498	chr17	+	2025	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9244	False	NA	16	True	AATAAA	-17	NA	57071777	57076841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_72935_227	chr17	+	2278	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	0	-253	0	1	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTCCTTGTGAT	9244	False	NA	13	True	NA	NA	NA	57071777	57077094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_72936_78	chr17	+	2071	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	-46	0	-25	0	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9198	False	NA	16	True	AATAAA	-17	NA	57071731	57076841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_72937_42	chr17	+	2326	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	-49	-252	-28	0	multi-exon	TRUE	canonical	3	220	junction_6	33.8230690505755	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTCTCCTTGTGA	9195	False	NA	12	True	NA	NA	NA	57071728	57077093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_72947_12	chr17	+	2357	11	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	256	junction_2	25.4283306569661	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9212	False	NA	15	True	AATAAA	-16	NA	57071745	57076840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_72950_17	chr17	+	2502	10	FSM	ENSMUSG00000007603.10	ENSMUST00000233549.2	2749	10	-5	252	1	0	multi-exon	FALSE	canonical	3	256	junction_2	26.7830792354676	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9245	False	NA	16	True	AATAAA	-17	NA	57071778	57076841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_72966_5	chr17	+	2977	11	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1654	1368	1628	-1368	internal_fragment	TRUE	canonical	3	15	junction_6	15.5244967712322	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57184130	57194536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440
Isoform_72968_22	chr17	+	2337	12	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1715	-2	1689	2	3prime_fragment	FALSE	canonical	3	15	junction_6	15.5260378474249	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCGCACCCCGAGGTAA	NA	False	NA	18	True	ATTAAA	-18	NA	57184191	57195906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
Isoform_72971_4	chr17	+	2686	10	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1701	-1368	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	18.3370366630011	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57184203	57194536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57192083_57192224_57193440
Isoform_72973_3	chr17	+	3101	8	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1704	-1368	intron_retention	FALSE	canonical	3	8	junction_6	18.372561618026	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57184206	57194536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57190498_57190626_57190861_57192083_57192224_57193440
Isoform_72976_1517	chr17	+	951	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	32	0	32	0	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	33	True	ATTAAA	-21	NA	57297336	57303188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
Isoform_72977_275	chr17	+	995	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	33	True	ATTAAA	-21	NA	57297292	57303188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
Isoform_72978_28	chr17	+	1295	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	-312	0	-312	0	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	33	True	ATTAAA	-21	NA	57296992	57303188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
Isoform_72987_267	chr17	+	729	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	4	184	4	1	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGGGATCTTCAAATGA	375	False	NA	5	True	AATAAA	-15	NA	57304346	57306138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
Isoform_72988_19	chr17	+	891	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	-2	28	2	-17	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAAC	369	False	NA	NA	False	NA	NA	NA	57304340	57306294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
Isoform_72990_13	chr17	+	543	3	FSM	ENSMUSG00000002661.15	ENSMUST00000074141.14	736	3	21	172	17	2	multi-exon	FALSE	canonical	3	32	junction_1	221	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGGATCTTCAAATGAC	388	False	NA	6	True	AATAAA	-16	NA	57304359	57306139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57304568_57305670_57305796_57305929
Isoform_72991_17	chr17	+	1088	4	ISM	ENSMUSG00000044279.16	ENSMUST00000071826.10	1194	5	3094	-1	-32	1	3prime_fragment	TRUE	canonical	3	14	junction_1	93.9657147876584	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGCTGTAAG	1494	False	NA	NA	False	AATAAA	-26	NA	57369198	57372913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_57369229_57369594_57369767_57370636_57370699_57372089
Isoform_72994_17	chr17	+	3371	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	41	-2206	-11	2206	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTGTGTGTGTTTAA	1567	False	NA	NA	False	NA	NA	NA	57369271	57375124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
Isoform_72995_221	chr17	+	1160	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	41	5	-11	1	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGCTGTAAG	1567	False	NA	NA	False	AATAAA	-26	NA	57369271	57372913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
Isoform_72997_74	chr17	+	786	5	FSM	ENSMUSG00000044279.16	ENSMUST00000169543.8	778	5	-12	4	-12	1	multi-exon	FALSE	canonical	3	51	junction_4	66.6520817379322	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGCTGTAAG	1566	False	NA	NA	False	AATAAA	-26	NA	57369270	57372913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089_57372234_57372608
Isoform_72998_7	chr17	+	1002	3	NIC	ENSMUSG00000044279.16	novel	1206	4	NA	NA	-26	0	intron_retention	FALSE	canonical	2	7	junction_1	97.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTTAGCTGTAA	1552	False	NA	NA	False	AATAAA	-25	NA	57369256	57372912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_57369374_57370636_57370699_57372089
Isoform_72999_17	chr17	+	3592	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	-30	-2694	-14	2203	multi-exon	FALSE	canonical	3	202	junction_2	10.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTTTGTGTGTGTGTT	1564	False	NA	NA	False	NA	NA	NA	57369268	57375121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57369767_57370636_57370699_57372089
Isoform_7300_4	chr10	+	918	10	FSM	ENSMUSG00000055862.8	ENSMUST00000218184.2	1196	10	278	0	-20	0	multi-exon	FALSE	canonical	2	4	junction_9	7.62711213410245	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGGAACAATTCTTT	NA	False	NA	2	True	ATTAAA	-15	NA	80538537	80541207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539591_80539686_80539763_80539872_80539921_80540013_80540029_80540251_80540270_80540532_80540548_80540897
Isoform_73000_94	chr17	+	1382	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	-28	-486	-12	1	multi-exon	FALSE	canonical	3	202	junction_2	10.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGCTGTAAG	1566	False	NA	NA	False	AATAAA	-26	NA	57369270	57372913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57369767_57370636_57370699_57372089
Isoform_73005_8	chr17	+	985	4	NIC	ENSMUSG00000044279.16	novel	778	5	NA	NA	-7	0	intron_retention	FALSE	canonical	3	51	junction_3	76.6130247122221	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTTAGCTGTAA	1587	False	NA	NA	False	AATAAA	-25	NA	57369291	57372912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_57369767_57370636_57370699_57372089_57372234_57372608
Isoform_73006_7	chr17	+	1304	3	FSM	ENSMUSG00000035678.9	ENSMUST00000039490.9	1290	3	-13	-1	-13	1	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCCTTTTATTATTTT	12	False	NA	NA	False	AATAAA	-11	NA	57412311	57414758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57412861_57413249_57413287_57414040
Isoform_73009_219	chr17	+	2002	14	FSM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	10	4	10	-4	multi-exon	FALSE	canonical	3	136	junction_12	68.855048845232	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTCTTGGAGTCTGCA	NA	False	NA	9	True	ATTAAA	-19	NA	57556464	57570423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
Isoform_73011_450	chr17	+	1997	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	-17	244	10	-6	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTTCTTGGAGTCTG	NA	False	NA	7	True	ATTAAA	-17	NA	57556464	57570421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
Isoform_73012_125	chr17	+	2023	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	-39	240	-12	-2	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTGGAGTCTGCACC	NA	False	NA	11	True	ATTAAA	-21	NA	57556442	57570425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
Isoform_73018_10	chr17	+	1910	13	NIC	ENSMUSG00000019487.12	novel	2224	14	NA	NA	-4	-5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	103.173666967669	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTTCTTGGAGTCTGC	NA	False	NA	8	True	ATTAAA	-18	NA	57556495	57570422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_57556572_57557741_57557858_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
Isoform_7302_15	chr10	+	7425	29	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_27	19.5948764648688	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	1668	False	NA	15	True	AATAAA	-19	NA	80591052	80631294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976_80628608_80629340
Isoform_73020_5	chr17	+	2906	27	FSM	ENSMUSG00000034116.18	ENSMUST00000005889.16	2963	27	-22	79	-22	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.18421571679543	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGCGTGTTCCAGACT	NA	False	NA	NA	False	AATAAA	-14	NA	57586077	57634952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_57586402_57602981_57603099_57603551_57603611_57603699_57603769_57604048_57604158_57604245_57604342_57605771_57605841_57606100_57606205_57606841_57606942_57608180_57608277_57608860_57608930_57609073_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612378_57612458_57612482_57612662_57612709_57613106_57613244_57614033_57614100_57616451_57616484_57618783_57618901_57622243_57622332_57625627_57625743_57631641_57631794_57634650
Isoform_73023_153	chr17	+	2773	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-2	19	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	24.9886393940413	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCCTGCCATTTGATAC	NA	False	NA	23	True	AATAAA	-34	NA	64171007	64446211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
Isoform_73024_18	chr17	+	3056	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	24.9886393940413	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACTTCCTAGGGTTTC	NA	False	NA	NA	False	TATAAA	-23	NA	64171007	64446494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
Isoform_73029_100	chr17	+	2758	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_10	30.9070689904469	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTATTAGCTAACCACAG	NA	False	NA	4	True	AATAAA	-15	NA	64171000	64446192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
Isoform_73030_8	chr17	+	3120	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-10	62	combination_of_known_junctions	FALSE	canonical	3	71	junction_10	30.9070689904469	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCGTGTCATTTTGTC	NA	False	NA	NA	False	NA	NA	NA	64170999	64446553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
Isoform_73031_5	chr17	+	5976	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-10	2918	combination_of_known_junctions	FALSE	canonical	3	71	junction_10	30.9070689904469	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTACTATACCATTAGA	NA	False	NA	NA	False	AATAAA	-19	NA	64170999	64449409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
Isoform_73033_8	chr17	+	2895	20	NNC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	20	17	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	52.0526581874234	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACCCTGCCATTTGAT	NA	False	NA	21	True	AATAAA	-32	NA	64171029	64446209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_64171051_64184991_64185138_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
Isoform_73038_67	chr17	+	6995	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	-4	0	-4	0	multi-exon	FALSE	canonical	3	46	junction_3	8.61970531560628	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTCTGGAGTAATT	NA	False	NA	9	True	AATAAA	-19	NA	64907726	65062105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
Isoform_7305_41	chr10	+	6787	28	FSM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	20	1	18	-1	multi-exon	FALSE	canonical	3	61	junction_7	16.1546877685662	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	1675	False	NA	15	True	AATAAA	-19	NA	80591059	80631294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
Isoform_73052_19	chr17	+	3784	20	FSM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	63	3	2	1	multi-exon	FALSE	canonical	3	102	junction_2	67.7698974676079	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGGAGAAAGGCGTT	NA	False	NA	32	True	AATAAA	-29	NA	66090412	66148918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_73053_52	chr17	+	3711	20	FSM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	63	76	2	-6	multi-exon	FALSE	canonical	3	102	junction_2	67.7698974676079	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGACACCACCCACTT	NA	False	NA	11	True	AATAAA	-21	NA	66090412	66148845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_73066_40	chr17	+	3737	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	50	-3	0	-1	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGGAGAAAGGCGTTTG	NA	False	NA	34	True	AATAAA	-31	NA	66090410	66148920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_73072_13	chr17	+	4104	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	-312	-8	274	4	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAAAGGCGTTTGTCTTT	NA	False	NA	39	True	AATAAA	-36	NA	66090048	66148925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_73076_12	chr17	+	3784	21	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	101.79502689228	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACACCACCCACTTTG	NA	False	NA	13	True	AATAAA	-23	NA	66090412	66148847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_73087_29	chr17	+	3827	19	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	9	-6	intron_retention	FALSE	canonical	3	294	junction_8	32.8404767562873	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGACACCACCCACTT	NA	False	NA	11	True	AATAAA	-21	NA	66090419	66148845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_7309_11	chr10	+	6844	28	FSM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	-36	0	-36	0	multi-exon	FALSE	canonical	3	61	junction_7	16.1546877685662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1619	False	NA	16	True	AATAAA	-20	NA	80591003	80631295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
Isoform_73097_77	chr17	+	1770	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	80	1055	-20	1	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418619	66426443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_73098_16	chr17	+	2886	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	17	2	9	-2	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	1	True	NA	NA	NA	66418556	66427496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_73100_48	chr17	+	1823	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	29	1053	21	3	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGAGCTGTCCTTTTTCC	NA	False	NA	27	True	AATAAA	-35	NA	66418568	66426445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_73104_6	chr17	+	1951	10	ISM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	-2	-1	-2	1	intron_retention	FALSE	canonical	0	0	junction_1	41.6333199893227	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418637	66426443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805
Isoform_73105_205	chr17	+	1848	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	-16	-1	-16	1	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418623	66426443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_73106_47	chr17	+	2886	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	-6	-1049	-6	-7	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCAACTTGCTTCTTG	NA	False	NA	-4	True	NA	NA	NA	66418633	66427491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_73107_11	chr17	+	1902	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	-71	0	21	0	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	False	NA	24	True	AATAAA	-32	NA	66418568	66426442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_73113_13	chr17	+	1999	11	NIC	ENSMUSG00000024101.16	novel	1831	11	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.5182236442885	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418642	66426443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_66418897_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_73119_64	chr17	+	4183	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-42	0	0	0	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGATCAAGTATGAGA	NA	False	NA	28	True	ATTAAA	-23	NA	66430565	66459169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
Isoform_73122_177	chr17	+	3459	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-42	724	0	61	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTCCGTGTTTTTC	NA	False	NA	3	True	NA	NA	NA	66430565	66458445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
Isoform_73126_4	chr17	+	4429	25	NNC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	0	61	intron_retention	FALSE	non_canonical	0	0	junction_21	38.7383495030728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTCCGTGTTTTTC	NA	False	NA	3	True	NA	NA	NA	66430565	66458445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66456621_66456644_66457048_66457325_66457405_66457568_66457724_66457797
Isoform_73129_78	chr17	+	9509	63	FSM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	6	11	0	-11	multi-exon	FALSE	canonical	3	108	junction_11	42.4970342357505	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAGTGGAATTAATGGTC	NA	False	NA	11	True	ATTAAA	-11	NA	68004259	68129631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
Isoform_73130_26	chr17	+	9540	63	FSM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	-25	11	-25	-11	multi-exon	TRUE	canonical	3	108	junction_11	42.4970342357505	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAGTGGAATTAATGGTC	NA	False	NA	11	True	ATTAAA	-11	NA	68004228	68129631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
Isoform_73172_8	chr17	+	4072	20	NIC	ENSMUSG00000024044.20	novel	2703	18	NA	NA	-2	1	combination_of_known_junctions	TRUE	canonical	1	4	junction_1	15.2069746354206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTCGTCTTCCATGT	NA	False	NA	17	True	AATAAA	-18	NA	69382675	69596981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
Isoform_73173_4	chr17	+	3952	19	NIC	ENSMUSG00000024044.20	novel	2703	18	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	15.4121364715371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTCTCGTCTTCCAT	NA	False	NA	15	True	AATAAA	-16	NA	69382676	69596979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
Isoform_73174_3	chr17	+	1761	9	ISM	ENSMUSG00000024044.20	ENSMUST00000225316.2	3966	13	46	18726	14	398	5prime_fragment	FALSE	canonical	3	49	junction_1	2.6809513236909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGGTGTGATTAATATAT	NA	False	NA	NA	False	AATAAA	-15	NA	69463818	69561117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390
Isoform_73175_24	chr17	+	3872	20	FSM	ENSMUSG00000024044.20	ENSMUST00000225977.2	3188	20	-22	-662	13	1	multi-exon	FALSE	canonical	3	30	junction_19	11.3154222706638	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTCGTCTTCCATGT	NA	False	NA	17	True	AATAAA	-18	NA	69463817	69596981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
Isoform_73178_32	chr17	+	3768	19	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_18	11.188066835078	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTCGTCTTCCATGT	NA	False	NA	17	True	AATAAA	-18	NA	69463804	69596981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
Isoform_73179_7	chr17	+	2927	19	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	5	19	combination_of_known_junctions	FALSE	canonical	3	29	junction_18	11.188066835078	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCTCCTTTTTCA	NA	False	NA	NA	False	ATTAAA	-39	NA	69463777	69596113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
Isoform_73180_6	chr17	+	3886	19	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	-52	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_18	11.188066835078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTCGTCTTCCATGT	NA	False	NA	17	True	AATAAA	-18	NA	69463686	69596981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
Isoform_73181_4	chr17	+	3557	18	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	15.4433891972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGCTCTCGTCTTCCA	NA	False	NA	14	True	AATAAA	-15	NA	69463820	69596978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
Isoform_73182_9	chr17	+	3845	20	NIC	ENSMUSG00000024044.20	novel	4073	22	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.9826220947193	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTCGTCTTCCATG	NA	False	NA	16	True	AATAAA	-17	NA	69463789	69596980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
Isoform_73183_12	chr17	+	3742	19	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	13.0085442007252	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTCGTCTTCCATGT	NA	False	NA	17	True	AATAAA	-18	NA	69463776	69596981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
Isoform_73186_123	chr17	+	3525	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	12	206	12	-206	multi-exon	FALSE	canonical	3	85	junction_1	58	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69690056	69697539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_69690265_69692415_69692500_69694306
Isoform_73190_26	chr17	+	3779	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-242	206	-242	-206	multi-exon	FALSE	canonical	3	85	junction_1	58	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69689802	69697539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_69690265_69692415_69692500_69694306
Isoform_73198_63	chr17	+	3384	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	35	206	35	-206	multi-exon	FALSE	canonical	3	64	junction_1	68.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69690348	69697539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_69690416_69692415_69692500_69694306
Isoform_7320_19	chr10	+	1772	9	FSM	ENSMUSG00000020211.16	ENSMUST00000151928.8	781	9	-76	-915	-76	-2	multi-exon	FALSE	canonical	3	55	junction_7	448.68263770175	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4810	False	NA	27	True	ATTAAA	-15	NA	80634489	80640756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639634_80639723_80639805
Isoform_73208_45	chr17	+	3787	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	-84	655	-84	-206	multi-exon	FALSE	canonical	3	41	junction_1	80	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69690750	69697539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_69691221_69692415_69692500_69694306
Isoform_7321_27	chr10	+	1721	9	FSM	ENSMUSG00000020211.16	ENSMUST00000151928.8	781	9	-23	-917	-23	0	multi-exon	FALSE	canonical	3	55	junction_7	448.68263770175	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4863	False	NA	29	True	ATTAAA	-17	NA	80634542	80640758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639634_80639723_80639805
Isoform_73219_3	chr17	+	2361	6	ISM	ENSMUSG00000003279.18	ENSMUST00000133717.9	2445	11	239168	-858	-47849	2	3prime_fragment	FALSE	canonical	2	6	junction_2	1.62480768092719	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACACGCTGCCTCATTCC	4113	False	NA	NA	False	AATAAA	-22	NA	71068217	71126398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188_71122342_71125019
Isoform_73220_9	chr17	+	467	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	-45	-37	-45	37	multi-exon	FALSE	canonical	3	64	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATGTAACTTTGGAGA	235	False	NA	33	True	AATAAA	-18	NA	71141613	71143076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_71141798_71142793
Isoform_73221_7	chr17	+	564	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	-37	-142	-37	142	multi-exon	FALSE	canonical	3	64	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTCTATCTTTTTTTT	243	False	NA	138	True	AATACA	-14	NA	71141621	71143181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_71141798_71142793
Isoform_73227_47	chr17	+	5740	20	NIC	ENSMUSG00000024052.18	novel	1112	11	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	6.20606440967734	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTGGGCTCCTTCCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	71490537	71556813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
Isoform_7323_1100	chr10	+	1700	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	511	2	-23	-2	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4863	False	NA	27	True	ATTAAA	-15	NA	80634542	80640756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
Isoform_7324_60	chr10	+	1772	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	441	0	-93	0	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4793	False	NA	29	True	ATTAAA	-17	NA	80634472	80640758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
Isoform_73242_1290	chr17	+	3430	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	15	5	15	-5	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	1290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCGCGTGTCTCGTGGT	NA	False	NA	13	True	AATAAA	-13	NA	71923224	71966021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
Isoform_7325_25	chr10	+	2110	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	103	0	103	0	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4455	False	NA	29	True	ATTAAA	-17	NA	80634134	80640758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
Isoform_73281_54	chr17	+	2114	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	253	753	253	5	multi-exon	FALSE	canonical	3	244	junction_1	49	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAACTGCTACTTATTT	998	False	NA	13	True	AATAAA	-22	NA	73143700	73157437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_73143787_73153273_73153439_73155574
Isoform_73283_97	chr17	+	1179	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	253	1688	253	673	multi-exon	FALSE	canonical	3	244	junction_1	49	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	998	False	NA	13	True	AATAAA	-13	NA	73143700	73156502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_73143787_73153273_73153439_73155574
Isoform_73286_42	chr17	+	2151	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	273	-5	50	5	multi-exon	FALSE	canonical	3	101	junction_1	120.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAACTGCTACTTATTT	1878	False	NA	13	True	AATAAA	-22	NA	73144580	73157437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_73144704_73153273_73153439_73155574
Isoform_73287_73	chr17	+	1195	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	294	930	71	673	multi-exon	FALSE	canonical	3	101	junction_1	120.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	1899	False	NA	13	True	AATAAA	-13	NA	73144601	73156502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_73144704_73153273_73153439_73155574
Isoform_73288_5	chr17	+	1543	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	-58	934	-58	669	multi-exon	FALSE	canonical	3	101	junction_1	120.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTTTTGGTCCTCTGT	1547	False	NA	9	True	AATAAA	-9	NA	73144249	73156498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_73144704_73153273_73153439_73155574
Isoform_73290_19	chr17	+	1305	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	70	-671	70	671	multi-exon	FALSE	canonical	3	29	junction_1	156.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGGTCCTCTGTTA	1898	False	NA	11	True	AATAAA	-11	NA	73144600	73156500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_73144815_73153273_73153439_73155574
Isoform_73292_7	chr17	+	693	3	FSM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	1	2375	1	227	multi-exon	FALSE	canonical	2	4	junction_1	4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACCGAGTCGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	73225300	73246567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_73225574_73228182_73228286_73246250
Isoform_73293_3	chr17	+	4369	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	58	-8	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	29.4659125092029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAAAGCTGTTGTGATT	NA	False	NA	8	True	AATAAA	-18	NA	73415046	73550355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_73415141_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
Isoform_73294_3	chr17	+	4434	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	29.4659125092029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATTCTGTTTTTACA	NA	False	NA	19	True	AATAAA	-29	NA	73414992	73550366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_73415141_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
Isoform_73295_44	chr17	+	4417	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	26	-3	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	15.992498241363	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGTGATTCTGTT	NA	False	NA	13	True	AATAAA	-23	NA	73415014	73550360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
Isoform_7330_19	chr10	+	1784	9	NIC	ENSMUSG00000020211.16	novel	727	5	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	436.564070326453	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	5078	False	NA	29	True	ATTAAA	-17	NA	80634757	80640758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80634937_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
Isoform_73300_33	chr17	+	4411	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	53	3	53	-3	multi-exon	FALSE	canonical	3	22	junction_1	24.2866218317822	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGTGATTCTGTT	NA	False	NA	13	True	AATAAA	-23	NA	73415041	73550360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
Isoform_73302_14	chr17	+	3606	6	FSM	ENSMUSG00000024065.9	ENSMUST00000024860.9	3659	6	52	1	52	-1	multi-exon	FALSE	canonical	1	2	junction_5	1.35646599662505	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTGGTGACTGAGCA	NA	False	NA	2	True	AATACA	-19	NA	74111887	74139088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74112465_74123225_74123403_74127472_74127571_74134144_74134558_74135040_74135206_74136912
Isoform_73307_46	chr17	+	4814	17	FSM	ENSMUSG00000024068.9	ENSMUST00000024869.8	4672	17	-144	2	-118	-2	multi-exon	FALSE	canonical	3	114	junction_1	37.2180546744453	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	9723	False	NA	31	True	AATAAA	-22	NA	74645863	74698108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
Isoform_73311_23	chr17	+	4945	17	FSM	ENSMUSG00000024068.9	ENSMUST00000024869.8	4672	17	-275	2	-249	-2	multi-exon	FALSE	canonical	3	114	junction_1	37.2180546744453	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	9592	False	NA	31	True	AATAAA	-22	NA	74645732	74698108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
Isoform_73324_100	chr17	+	4817	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-124	-2627	-124	-2	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	9717	False	NA	31	True	AATAAA	-22	NA	74645857	74698108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
Isoform_73326_18	chr17	+	4972	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-279	-2627	-279	-2	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	9562	False	NA	31	True	AATAAA	-22	NA	74645702	74698108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
Isoform_73329_5	chr17	+	4717	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	-169	-2802	-119	-1	multi-exon	FALSE	canonical	3	21	junction_3	61.0152622072726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATAGTCTTCGATAT	9722	False	NA	32	True	AATAAA	-23	NA	74645862	74698109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
Isoform_73335_4	chr17	+	1250	11	ISM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	14	8061	1	438	5prime_fragment	FALSE	canonical	3	152	junction_5	23.4838242200882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	74702616	74723155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614
Isoform_73336_63	chr17	+	1919	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	14	215	1	-3	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGTGAGGTATATTCT	NA	False	NA	6	True	AATAAA	-19	NA	74702616	74731001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
Isoform_73337_59	chr17	+	2133	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	14	1	1	-1	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCATTTACAATCGTAGT	NA	False	NA	NA	False	AATAAA	-22	NA	74702616	74731215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
Isoform_73338_155	chr17	+	1577	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	14	557	1	-2	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTCTTGTGGCAGTGA	NA	False	NA	11	True	TATAAA	-14	NA	74702616	74730659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
Isoform_73339_6	chr17	+	2215	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	6	-73	6	73	multi-exon	TRUE	canonical	3	152	junction_5	21.3572043468894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCATGGTTCCCAGTGT	NA	False	NA	NA	False	AATAGA	-20	NA	74702608	74731289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
Isoform_73346_18	chr17	+	2014	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	18	101	18	-101	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTGTATTATTCTTT	NA	False	NA	NA	False	NA	NA	NA	74796505	74807171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
Isoform_73347_135	chr17	+	1810	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	18	305	18	12	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATACCTTGTCCTATATTA	NA	False	NA	17	True	AATAAA	-29	NA	74796505	74806967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
Isoform_73349_135	chr17	+	1772	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	44	317	-13	0	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTTTTACAATACCT	NA	False	NA	5	True	AATAAA	-17	NA	74796531	74806955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
Isoform_73354_12	chr17	+	2071	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	18	44	18	-44	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTATGACATCGTCTCT	NA	False	NA	NA	False	NA	NA	NA	74796505	74807228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
Isoform_73355_13	chr17	+	2045	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	44	44	-13	-44	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTATGACATCGTCTCT	NA	False	NA	NA	False	NA	NA	NA	74796531	74807228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
Isoform_73358_5	chr17	+	2790	9	ISM	ENSMUSG00000024073.17	ENSMUST00000182944.8	14610	73	-113	122028	60	13506	5prime_fragment	FALSE	canonical	3	29	junction_5	4.78114787472632	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAGAGAAAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	74835349	74887350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159
Isoform_73359_3	chr17	+	1868	10	ISM	ENSMUSG00000024073.17	ENSMUST00000183224.8	14562	73	125848	13025	11	7900	internal_fragment	FALSE	canonical	3	23	junction_9	5.21630870858022	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCCAGTAGTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	74961394	74996353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212
Isoform_73360_298	chr17	+	2807	20	FSM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	31	0	1	0	multi-exon	FALSE	canonical	3	124	junction_5	16.0728948897983	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024757	75170565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
Isoform_73364_73	chr17	+	2804	20	FSM	ENSMUSG00000024078.8	ENSMUST00000234568.2	2651	20	-149	-4	1	0	multi-exon	FALSE	canonical	3	41	junction_19	29.4919116570221	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024757	75170565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170331
Isoform_73366_5	chr17	+	2612	18	NIC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	38.919933783021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024772	75170565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
Isoform_73367_7	chr17	+	2664	19	NIC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	-6	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	36.8121692171099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACGTCCTTATTTTGTG	NA	False	NA	1	True	AATAAA	-12	NA	75024750	75170556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_75025007_75025628_75025807_75028515_75028646_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
Isoform_73369_5	chr17	+	6078	34	FSM	ENSMUSG00000001870.17	ENSMUST00000001927.12	6671	34	152	441	-98	0	multi-exon	FALSE	canonical	2	10	junction_21	5.00871600276228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTGAGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	75312714	75698321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
Isoform_73370_6	chr17	+	5920	34	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-98	1	combination_of_known_junctions	FALSE	canonical	2	10	junction_21	5.00871600276228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTGAGTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	75312714	75698322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
Isoform_73371_3	chr17	+	6398	34	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	117	3	combination_of_known_junctions	FALSE	canonical	2	10	junction_21	5.00871600276228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCTGTCTATGATACT	NA	False	NA	NA	False	NA	NA	NA	75312679	75698765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
Isoform_73372_11	chr17	+	6075	17	FSM	ENSMUSG00000024074.9	ENSMUST00000112498.3	5995	17	-82	2	-82	-2	multi-exon	FALSE	canonical	2	7	junction_5	3.24458683810435	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCTGTAGTTTTTGTTT	NA	False	NA	NA	False	AATAAA	-29	NA	78507594	78684019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_78508529_78545170_78545345_78587401_78587645_78588674_78588796_78610415_78610538_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
Isoform_73375_13	chr17	+	878	8	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-52	6140	-30	2965	5prime_fragment	FALSE	canonical	3	101	junction_6	14.3697528134052	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAGGAAGAGGAAAAGG	8800	False	NA	NA	False	NA	NA	NA	79142965	79149597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541
Isoform_73377_97	chr17	+	1209	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-21	2946	1	4	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGATGTGGCATTGTGA	8831	False	NA	12	True	AATACA	-24	NA	79142996	79152791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
Isoform_73378_4	chr17	+	2868	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	0	-1246	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	40.8783561313319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGTTGACCGGTCGAG	8830	False	NA	NA	False	NA	NA	NA	79142995	79154491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153759_79153800
Isoform_73379_3	chr17	+	1102	9	NIC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	-29	-6	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	40.2086355774478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGTTACAAGTGATGT	8801	False	NA	2	True	AATACA	-14	NA	79142966	79152781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_79143108_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
Isoform_73380_253	chr17	+	597	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	3	2	3	-2	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGTGTGTGGGTCTGC	NA	False	NA	NA	False	AATAAA	-20	NA	79223931	79227733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
Isoform_73381_14	chr17	+	1340	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	3	-741	3	741	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACAGTTTTGAATCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	79223931	79228476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
Isoform_73383_64	chr17	+	742	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	9	2	9	-2	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGTGTGTGGGTCTGC	NA	False	NA	NA	False	AATAAA	-20	NA	79223954	79227733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
Isoform_73389_13	chr17	+	931	5	NIC	ENSMUSG00000062691.11	novel	443	2	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	686.839500902503	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAACGTGTGTGGGTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	79224131	79227732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_79224490_79225785_79225902_79226484_79226530_79227187_79227273_79227405
Isoform_73396_374	chr17	+	1414	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	3	332	2	-6	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAGTTTTCAAACTAGT	NA	False	NA	18	True	AATAAA	-27	NA	79244567	79254596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
Isoform_73398_34	chr17	+	1461	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	17	271	5	55	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCATGCCTTTA	NA	False	NA	79	True	AATAAA	-22	NA	79244581	79254657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
Isoform_73400_30	chr17	+	1737	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	14	-2	2	2	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCTCCTTATCAACT	NA	False	NA	NA	False	AGTAAA	-14	NA	79244578	79254930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
Isoform_73403_8	chr17	+	2879	8	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	-3	-16	intron_retention	FALSE	canonical	3	397	junction_1	39.3550038309058	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAGTAACATAAGTTT	NA	False	NA	8	True	AATAAA	-17	NA	79244584	79254586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79251374_79252369_79252514_79253724_79253899_79254303
Isoform_73407_73	chr17	+	1710	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	355	-6	73	6	multi-exon	FALSE	canonical	3	226	junction_1	6.47216261298253	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTATTGCCTCTTTGTT	NA	False	NA	4	True	AATATA	-20	NA	79359689	79397813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_73408_175	chr17	+	1544	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	355	160	73	-3	multi-exon	FALSE	canonical	3	226	junction_1	6.47216261298253	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGAATTTATTTTCA	NA	False	NA	8	True	ATTAAA	-17	NA	79359689	79397647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_73410_7	chr17	+	1643	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	257	159	-25	-2	multi-exon	TRUE	canonical	3	226	junction_1	6.47216261298253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGAATTTATTTTCAT	NA	False	NA	9	True	ATTAAA	-18	NA	79359591	79397648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_73413_19	chr17	+	1397	6	FSM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	73	3	73	-3	multi-exon	FALSE	canonical	3	32	junction_1	82.0351144327842	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGAATTTATTTTCA	NA	False	NA	8	True	ATTAAA	-17	NA	79359689	79397647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79359818_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_73414_7	chr17	+	1565	6	FSM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	69	-161	69	4	multi-exon	FALSE	canonical	3	32	junction_1	82.0351144327842	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAACTATTGCCTCTTTG	NA	False	NA	2	True	AATATA	-18	NA	79359685	79397811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_79359818_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_73415_221	chr17	+	2331	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	-16	-1	-16	1	multi-exon	FALSE	canonical	3	126	junction_3	8.09149072929224	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTCTTGTTCTTTTGT	NA	False	NA	12	True	AATAAA	-20	NA	80434883	80492531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
Isoform_73424_222	chr17	+	1087	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	16	31	16	-31	multi-exon	FALSE	canonical	3	317	junction_1	34	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAAAATCCGTTTCGGG	NA	False	NA	8	True	AATAAA	-27	NA	80531885	80535895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_80532100_80533049_80533194_80535166
Isoform_73425_16	chr17	+	1036	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	99	-1	99	1	multi-exon	FALSE	canonical	3	317	junction_1	34	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATATTTCTATTCTTAAA	NA	False	NA	40	True	ATTAAA	-31	NA	80531968	80535927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_80532100_80533049_80533194_80535166
Isoform_73427_43	chr17	+	621	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	24	-1	24	1	multi-exon	FALSE	canonical	3	50	junction_3	10.1242283656583	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAATTATGTAT	NA	False	NA	13	True	AATAAA	-16	NA	80597664	80604903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
Isoform_7343_5812	chr10	+	1045	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	6566	junction_4	420.790624895565	5812	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662519	80665124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
Isoform_73432_147	chr17	+	5463	24	FSM	ENSMUSG00000032624.17	ENSMUST00000096766.12	5441	24	-21	-1	-21	1	multi-exon	FALSE	canonical	3	134	junction_6	101.418055237548	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658338	83787787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_73436_285	chr17	+	5352	23	FSM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	-227	-2191	-3	1	multi-exon	FALSE	canonical	3	198	junction_4	84.4550347377939	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658416	83787787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_73437_17	chr17	+	4867	23	FSM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	-306	-1627	-22	-470	multi-exon	FALSE	canonical	3	198	junction_4	84.4550347377939	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGGTCTCTTTCAAAGG	NA	False	NA	NA	False	AATAAA	-21	NA	83658337	83787223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_73443_69	chr17	+	5294	23	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	3	110	junction_3	107.479269575252	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658333	83787787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_73447_142	chr17	+	5255	22	FSM	ENSMUSG00000032624.17	ENSMUST00000112363.10	5081	22	-80	-94	-20	1	multi-exon	FALSE	canonical	3	110	junction_3	90.7300948604083	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658339	83787787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_73451_74	chr17	+	5116	22	NIC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	112.735940543597	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658385	83787790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_73455_49	chr17	+	5080	21	FSM	ENSMUSG00000032624.17	ENSMUST00000049503.10	5052	21	-25	-3	-25	1	multi-exon	FALSE	canonical	3	67	junction_3	95.8126296476618	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658385	83787787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_73472_230	chr17	+	1732	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112349.9	1728	14	-4	0	-4	0	multi-exon	FALSE	canonical	3	262	junction_11	233.064406873892	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTGTTTTTTTTTTT	NA	False	NA	12	True	AATAAA	-17	NA	84013587	84100304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
Isoform_73479_616	chr17	+	1711	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	16	-4	-5	2	multi-exon	FALSE	canonical	3	649	junction_11	147.297388673592	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTTTTTTTTTTT	NA	False	NA	14	True	AATAAA	-19	NA	84013607	84100306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
Isoform_73486_28	chr17	+	2063	17	NIC	ENSMUSG00000055817.19	novel	2087	17	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_15	404.890412449776	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTTTATTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	84013646	84122334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
Isoform_73487_22	chr17	+	2117	17	NIC	ENSMUSG00000055817.19	novel	2087	17	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_15	404.890412449776	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGTGTTTATTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	84013590	84122332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
Isoform_7349_85	chr10	+	1018	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	460	junction_4	2987.93005272881	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	14	True	AATAAA	-14	NA	80662519	80665119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664726
Isoform_73494_4	chr17	+	4737	30	FSM	ENSMUSG00000040852.7	ENSMUST00000047206.7	6882	30	-9	2154	-9	-2154	multi-exon	FALSE	canonical	1	1	junction_17	2.89449845123218	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGTGTCTTAGACAAA	NA	False	NA	NA	False	AATAAA	-20	NA	84819313	84927412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_84819393_84829123_84829254_84854890_84854954_84864799_84864950_84866917_84867002_84867515_84867598_84871245_84871426_84873398_84874364_84877303_84877380_84878469_84878565_84879095_84879241_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
Isoform_73495_64	chr17	+	1358	13	FSM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	-9	5	-9	-5	multi-exon	FALSE	canonical	3	61	junction_6	7.6412622575651	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCAACATCTAAGTATAA	NA	False	NA	11	True	AATAAA	-19	NA	84933914	84963011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
Isoform_73497_1195	chr17	+	2582	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	3	85	3	-85	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTCTCTCAGTTTCC	NA	False	NA	17	True	AATAAA	-27	NA	85265429	85322034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
Isoform_73498_166	chr17	+	2665	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	3	2	3	-2	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGCACACTTTGGCTC	NA	False	NA	4	True	AATAAA	-20	NA	85265429	85322117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
Isoform_73501_42	chr17	+	2753	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	3	-86	3	86	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATGTAGTTCTGCTG	NA	False	NA	92	True	ATTAAA	-28	NA	85265429	85322205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
Isoform_73511_990	chr17	+	3255	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-7	75	3	-75	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGTGTGACATATTACT	NA	False	NA	24	True	AATAAA	-13	NA	85265429	85324550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
Isoform_73516_53	chr17	+	3329	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-7	1	3	-1	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTGGCATACTTGTGG	NA	False	NA	18	True	AATAAA	-30	NA	85265429	85324624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
Isoform_73520_36	chr17	+	1885	7	NIC	ENSMUSG00000061130.14	novel	1307	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	715.729639365778	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTGGTTTTATTCCA	NA	False	NA	11	True	AATAAA	-19	NA	85265429	85331419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85330459_85330508_85331123
Isoform_73522_71	chr17	+	1838	6	FSM	ENSMUSG00000061130.14	ENSMUST00000234332.2	1290	6	-374	-174	3	1	multi-exon	FALSE	canonical	3	54	junction_5	598.858046618729	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTGGTTTTATTCCAG	NA	False	NA	12	True	AATAAA	-20	NA	85265429	85331420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85331123
Isoform_73533_74	chr17	+	1521	11	FSM	ENSMUSG00000071037.7	ENSMUST00000095188.7	1595	11	74	0	20	0	multi-exon	FALSE	canonical	3	62	junction_6	13.9484766193302	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGTTTCAATCTATC	2247	False	NA	10	True	AATAAA	-26	NA	85398053	85766016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_85398292_85403917_85404091_85421210_85421276_85699000_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85738898_85738974_85746954_85747019_85759623_85759756_85765489
Isoform_73534_4	chr17	+	1366	10	NIC	ENSMUSG00000071037.7	novel	1595	11	NA	NA	100	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	26.2805377925694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGTTTCAATCTATC	2327	False	NA	10	True	AATAAA	-26	NA	85398133	85766016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_85398292_85403917_85404091_85421210_85421276_85699000_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85746954_85747019_85759623_85759756_85765489
Isoform_73535_3	chr17	+	1465	10	NIC	ENSMUSG00000071037.7	novel	1595	11	NA	NA	1	0	combination_of_known_splicesites	TRUE	canonical	2	8	junction_7	26.2805377925694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGTTTCAATCTATC	2228	False	NA	10	True	AATAAA	-26	NA	85398034	85766016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_85398292_85403917_85404091_85421210_85421276_85699000_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85746954_85747019_85759623_85759756_85765489
Isoform_73538_24	chr17	+	4446	4	NNC	ENSMUSG00000071037.7	novel	741	4	NA	NA	73	-36020	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	37.6769897358528	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCAGTCCATCTGTGA	2300	False	NA	1	True	AATAAA	-37	NA	85398106	85437916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_85398292_85403917_85404091_85421210_85421276_85433893
Isoform_73539_15	chr17	+	4499	4	NNC	ENSMUSG00000071037.7	novel	741	4	NA	NA	20	-36020	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	37.6769897358528	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCAGTCCATCTGTGA	2247	False	NA	1	True	AATAAA	-37	NA	85398053	85437916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_85398292_85403917_85404091_85421210_85421276_85433893
Isoform_73540_8	chr17	+	3526	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	-101	2091	-101	-2091	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTACCGTTGATGAA	NA	False	NA	NA	False	AATACA	-17	NA	87061026	87138747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
Isoform_73544_19	chr17	+	5518	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	-3	1	-3	-1	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGCTCGTGCCTCTTGT	NA	False	NA	9	True	ATTAAA	-14	NA	87061124	87140837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
Isoform_73549_6	chr17	+	3081	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	3	1067	3	-1067	multi-exon	FALSE	canonical	3	30	junction_4	3.74165738677394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCTGTGGAGATTTGA	NA	False	NA	NA	False	AGTAAA	-17	NA	87270512	87306430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
Isoform_73550_16	chr17	+	3968	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	171	12	-39	-12	multi-exon	FALSE	canonical	3	30	junction_4	3.74165738677394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCACTGGACTTCTTAC	NA	False	NA	18	True	AATAAA	-28	NA	87270680	87307485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
Isoform_73553_6	chr17	+	1145	5	FSM	ENSMUSG00000024146.10	ENSMUST00000160269.2	763	5	-44	-338	17	0	multi-exon	FALSE	canonical	2	8	junction_1	278.799210902757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTCTTCAATGAT	NA	False	NA	4	True	AATAAA	-14	NA	87332994	87343238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87333082_87335126_87335193_87338435_87338491_87341683_87341788_87342405
Isoform_73555_244	chr17	+	1147	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	36	1	-24	-1	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTGTGTCTTCAATGA	NA	False	NA	3	True	AATAAA	-13	NA	87333013	87343237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
Isoform_73556_5	chr17	+	1482	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	18	-316	18	316	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	87332995	87343554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
Isoform_73562_62	chr17	+	3443	2	FSM	ENSMUSG00000037104.10	ENSMUST00000234803.2	978	2	-79	-2386	-67	-1211	multi-exon	FALSE	canonical	3	48	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCGTTTTATACATT	NA	False	NA	7	True	AATAAA	-21	NA	87415039	87444056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87415476_87441049
Isoform_73565_27	chr17	+	4452	2	FSM	ENSMUSG00000037104.10	ENSMUST00000234803.2	978	2	-80	-3394	-68	-203	multi-exon	FALSE	canonical	3	48	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACGTGCAGCGAAGTCT	NA	False	NA	NA	False	TTTAAA	-17	NA	87415038	87445064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87415476_87441049
Isoform_73567_3	chr17	+	3556	2	FSM	ENSMUSG00000037104.10	ENSMUST00000234803.2	978	2	-194	-2384	-182	-1213	multi-exon	FALSE	canonical	3	48	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGCCGTTTTATACA	NA	False	NA	5	True	AATAAA	-19	NA	87414924	87444054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87415476_87441049
Isoform_73569_48	chr17	+	4627	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	-13	0	-13	0	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590300	87689197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
Isoform_73570_85	chr17	+	4597	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	17	0	-2	0	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590330	87689197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
Isoform_73573_4	chr17	+	2711	16	NNC	ENSMUSG00000036918.17	novel	2209	17	NA	NA	-13	10221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	19.9381265140155	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGACTCTTCTGCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	87590300	87657598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87657043
Isoform_73574_9	chr17	+	4735	21	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	20.231164079212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGAGTGTCCAGTTAC	NA	False	NA	11	True	AATAAA	-26	NA	87590313	87689195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87601371_87601495_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
Isoform_7358_94	chr10	+	1034	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	233	junction_1	2913.0790733346	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	14	True	AATAAA	-14	NA	80662519	80665119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80662740_80664076_80664217_80664294_80664468_80664544_80664631_80664704
Isoform_73580_218	chr17	+	1544	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	-24	225	-24	-202	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAAGTTTGTTTGAAT	NA	False	NA	27	True	AATAAA	-35	NA	87944085	87958332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
Isoform_73581_24	chr17	+	1772	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	-25	-2	-25	2	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGGGTAAGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	87944084	87958559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
Isoform_73583_27	chr17	+	1707	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	38	0	38	0	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGTGGGTAAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	87944147	87958557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
Isoform_73584_16	chr17	+	1622	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	-108	231	-108	-208	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGTTTCTAAGTTTGT	NA	False	NA	21	True	AATAAA	-29	NA	87944001	87958326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
Isoform_73595_4279	chr17	+	3044	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	239	0	8	0	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	4279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4900	False	NA	19	True	AATAAA	-16	NA	87979996	88031141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
Isoform_73596_938	chr17	+	3097	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	186	0	-24	0	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4847	False	NA	19	True	AATAAA	-16	NA	87979943	88031141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
Isoform_73647_6633	chr17	+	4241	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	1	9	1	-9	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	6633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282490	88298311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
Isoform_73648_135	chr17	+	4310	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	-67	8	-67	-8	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	NA	False	NA	23	True	AATAAA	-12	NA	88282422	88298312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
Isoform_7366_11	chr10	+	3571	14	NIC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	-19	2	intron_retention	FALSE	canonical	2	7	junction_5	8.94824038105592	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCTCCTGTCCTGTG	NA	False	NA	9	True	ATTAAA	-17	NA	80691146	80704540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
Isoform_7368_21	chr10	+	2833	15	NIC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	9.35387074740632	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691147	80704542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
Isoform_7369_35	chr10	+	3566	14	ISM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	42	0	-15	0	intron_retention	FALSE	canonical	3	19	junction_5	6.4925993372336	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691150	80704542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
Isoform_7370_5	chr10	+	4062	14	ISM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	41	-495	-16	495	intron_retention	FALSE	canonical	3	19	junction_5	6.4925993372336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80691149	80705037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
Isoform_73701_7	chr17	+	3792	3	NNC	ENSMUSG00000034998.19	novel	2892	3	NA	NA	5	3322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	144	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88748143	88773787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_88748313_88770140_88771457_88771480
Isoform_73702_8	chr17	+	2926	3	FSM	ENSMUSG00000034998.19	ENSMUST00000134107.2	2892	3	-32	-2	-9	2	multi-exon	FALSE	canonical	3	279	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	88748153	88785499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_88748313_88770140_88770692_88783283
Isoform_73703_491	chr17	+	5061	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	21	3	-3	-3	multi-exon	FALSE	canonical	3	257	junction_4	10.9288608738514	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGCTTTGTTATTTGT	NA	False	NA	12	True	AATAAA	-16	NA	88748159	88797958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
Isoform_73709_31	chr17	+	5012	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	115.789410137542	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGCTTTGTTATTTGT	NA	False	NA	12	True	AATAAA	-16	NA	88748139	88797958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88793830
Isoform_7371_74	chr10	+	2831	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	38	0	-19	0	multi-exon	FALSE	canonical	3	19	junction_5	7.35298079221021	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691146	80704542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
Isoform_73711_7	chr17	+	4523	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	8	-3	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	109.937197981393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGCTTTGTTATTTGT	NA	False	NA	12	True	AATAAA	-16	NA	88748146	88797958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_88748313_88783283_88783379_88786703_88786769_88791828_88791898_88793830
Isoform_73714_149	chr17	+	3036	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	104	1	6	-1	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCGGTCTGTGACAGT	NA	False	NA	15	True	AATAAA	-16	NA	88837649	88895794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
Isoform_73716_12	chr17	+	3152	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	-13	2	-13	0	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTCGGTCTGTGACAG	NA	False	NA	14	True	AATAAA	-15	NA	88837532	88895793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
Isoform_7372_10	chr10	+	2864	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	4	1	-2	-1	multi-exon	FALSE	canonical	3	19	junction_5	7.35298079221021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCCTCCTGTCCTGTGA	NA	False	NA	10	True	ATTAAA	-18	NA	80691112	80704541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
Isoform_73720_3	chr17	+	3062	2	FSM	ENSMUSG00000033855.16	ENSMUST00000137138.2	767	2	5	-2300	5	495	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTTTTCTTCTCTAG	NA	False	NA	NA	False	TATAAA	-18	NA	88905116	88945557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_88905170_88942548
Isoform_73721_4	chr17	+	1603	9	FSM	ENSMUSG00000024154.12	ENSMUST00000024970.11	1621	9	17	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACACATTTACAACATAG	NA	False	NA	NA	False	AATAAA	-18	NA	88976104	89022579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_88976160_88978621_88978724_88978926_88979048_88997414_88997471_88999145_88999231_89001530_89002097_89018868_89019127_89019783_89019874_89022309
Isoform_73722_3	chr17	+	622	6	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	19018	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	82.110657042798	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057543	95101578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_95057661_95060130_95060304_95062638_95062734_95063861_95063952_95092912_95092936_95101454
Isoform_73723_8	chr17	+	1280	10	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	48.1350979465191	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95057543	95082557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
Isoform_73725_4	chr17	+	1175	9	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_6	52.9339210714642	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTGGGTGTCCCCTCCC	NA	False	NA	NA	False	AATAAA	-12	NA	95057542	95082558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
Isoform_73726_4	chr17	+	1156	9	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	47.0790558528949	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTCCCCTCCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	95057543	95082561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
Isoform_73727_3	chr17	+	2525	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-2	12595	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	28.1108915230774	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGGGACACTTCATAC	NA	False	NA	NA	False	NA	NA	NA	95057563	95095155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912
Isoform_73728_30	chr17	+	448	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	19017	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	29.2232783924049	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCATGGTTCATTTTG	NA	False	NA	10	True	AATAAA	-15	NA	95057543	95101577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95101454
Isoform_7373_113	chr10	+	803	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	1	480	1	-35	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCATCCCCCAGAACAAT	249	False	NA	15	True	AATAAA	-18	NA	80765907	80767558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
Isoform_73730_4	chr17	+	6530	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-9	16815	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	71.1244507887407	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAGATTTAAAGTA	NA	False	NA	NA	False	NA	NA	NA	95057518	95099375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95093195
Isoform_73731_3	chr17	+	465	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19018	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	73.1624903895432	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057542	95101578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092951_95101454
Isoform_73732_3	chr17	+	1063	8	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	36.7106724180824	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCCCCTCCCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	95057543	95082563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_95057661_95063861_95063952_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
Isoform_73733_38	chr17	+	354	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	19018	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_3	26.8493740874697	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057543	95101578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_95057661_95063861_95063952_95092912_95092936_95101454
Isoform_73734_6	chr17	+	370	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19018	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	77.6831169989121	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057542	95101578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_95057661_95063861_95063952_95092912_95092951_95101454
Isoform_73737_105	chr17	+	3078	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-2	3	-2	-3	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCCTTCGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	95172343	95185746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
Isoform_73738_23	chr17	+	3123	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-48	4	-48	-4	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTCGTCATGG	NA	False	NA	NA	False	NA	NA	NA	95172297	95185745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
Isoform_73739_14	chr17	+	4690	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-18	-1593	-18	1593	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTATTATGTCTC	NA	False	NA	NA	False	NA	NA	NA	95172327	95187342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
Isoform_7374_39	chr10	+	1283	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	1	0	1	0	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	249	False	NA	5	True	AATAAA	-14	NA	80765907	80768038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
Isoform_73741_48	chr17	+	2295	2	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15671	1793	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29004392	29027075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_29004515_29024902
Isoform_73742_147	chr17	+	5575	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	93.4760039454483	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004407	29057515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483_29056446_29056466
Isoform_73744_6	chr17	+	5477	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	108.838437858854	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004407	29057515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483_29056446_29056466
Isoform_73746_6	chr17	+	2459	3	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15664	1793	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	33	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29004399	29027075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_29004515_29018946_29019118_29024902
Isoform_73748_30	chr17	+	5746	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	104.342743702019	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004407	29057515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483_29056446_29056466
Isoform_7375_880	chr10	+	2460	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	33	339	33	-339	multi-exon	TRUE	canonical	3	459	junction_3	51.2387521532504	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5483	False	NA	10	True	ATTAAA	-16	NA	80905901	80918054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
Isoform_73751_48	chr17	+	2157	4	Intergenic	novelGene_4718	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	12	True	NA	NA	NA	17399550	17426485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
Isoform_73752_117	chr17	+	2093	4	Intergenic	novelGene_4722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	117	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17399613	17426484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
Isoform_73753_32	chr17	+	2321	4	Intergenic	novelGene_4719	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCCAAGTATGCTGCT	NA	False	NA	20	True	NA	NA	NA	17399550	17426649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
Isoform_73754_81	chr17	+	2288	4	Intergenic	novelGene_4720	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	81	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCCAAGTATGCTGCTC	NA	False	NA	21	True	NA	NA	NA	17399584	17426650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
Isoform_73755_24	chr17	+	2246	5	Intergenic	novelGene_4723	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	71.2355248454028	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17399613	17426484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17399714_17399977_17400131_17422956_17423084_17423325_17423387_17424679
Isoform_73756_4	chr17	+	2440	5	Intergenic	novelGene_4721	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	71.2355248454028	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCCAAGTATGCTGCTC	NA	False	NA	21	True	NA	NA	NA	17399585	17426650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17399714_17399977_17400131_17422956_17423084_17423325_17423387_17424679
Isoform_73757_5	chr17	+	2327	5	Intergenic	novelGene_4717	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	71.2355248454028	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	12	True	NA	NA	NA	17399533	17426485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17399714_17399977_17400131_17422956_17423084_17423325_17423387_17424679
Isoform_73759_8	chr17	+	2395	5	Intergenic	novelGene_4724	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	78.091292728447	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATCCCCAAGTATGCTG	NA	False	NA	18	True	NA	NA	NA	17399613	17426647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17399714_17399977_17400117_17422956_17423084_17423325_17423387_17424679
Isoform_7376_1682	chr10	+	2424	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	69	339	-23	-339	multi-exon	FALSE	canonical	3	459	junction_3	51.2387521532504	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5519	False	NA	10	True	ATTAAA	-16	NA	80905937	80918054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
Isoform_73760_109	chr17	+	1091	3	NNC	ENSMUSG00000055760.13	novel	1134	3	NA	NA	16	-31	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_1	120	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAAAATCCGTTTCGGG	NA	False	NA	8	True	AATAAA	-27	NA	80531885	80535895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_80532104_80533049_80533194_80535166
Isoform_73764_100	chr17	+	3306	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19769	-1	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	56.2899635814414	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTTTTGGTATA	NA	False	NA	20	True	AATAAA	-16	NA	43347227	43400079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_43347446_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
Isoform_73765_5	chr17	+	2404	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19720	-952	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	56.2899635814414	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTCCACATATTCTCCA	NA	False	NA	9	True	ACTAAA	-9	NA	43347178	43399128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_43347446_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
Isoform_73768_29	chr17	+	1072	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	419.268219639886	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAACGTCTGTGTTCTGG	NA	False	NA	24	True	AATAAA	-32	NA	48717033	48724297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_48717123_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_73770_35	chr17	+	1023	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	31	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	419.268219639886	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	14	True	AATAAA	-22	NA	48717072	48724287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_48717123_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_73771_4	chr17	+	4502	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16077	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	13.6679369328366	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGTGTCTCATCTGGG	2016	False	NA	17	True	AATAAA	-22	NA	47507235	47670385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
Isoform_73772_4	chr17	+	4611	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16124	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	10.0179526351446	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGTCTCATCTGGGCT	1969	False	NA	19	True	AATAAA	-24	NA	47507188	47670387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
Isoform_73777_57	chr17	+	866	3	NNC	ENSMUSG00000092349.2	novel	807	3	NA	NA	-11916	3	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_1	2.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTCTGACTTAAATTTC	NA	False	NA	16	True	NA	NA	NA	34112192	34125652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_34112309_34124501_34124892_34125292
Isoform_73779_44	chr17	+	845	4	NNC	ENSMUSG00000023904.11	novel	597	4	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTCTCAGCAGCCTT	NA	False	NA	8	True	AATAAA	-16	NA	23892589	23894198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
Isoform_73781_4	chr17	+	1143	4	NNC	ENSMUSG00000023904.11	novel	597	4	NA	NA	8	295	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGGTTGTTTCCGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	23892589	23894496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
Isoform_73782_18	chr17	+	5026	6	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	241	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	100.061181284252	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGCTTTGTTATTTGT	NA	False	NA	12	True	AATAAA	-16	NA	88748443	88797958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_88748562_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
Isoform_73785_9	chr17	+	2973	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13311	1029	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	3.26917420765551	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACTGCATCAGTTTTTA	NA	False	NA	2	True	NA	NA	NA	22893389	22910470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_22893506_22905293_22905368_22906456_22906513_22906703_22906831_22907870
Isoform_73786_8	chr17	+	3057	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13392	1032	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	3.26917420765551	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCATCAGTTTTTAGTG	NA	False	NA	5	True	NA	NA	NA	22893308	22910473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_22893506_22905293_22905368_22906456_22906513_22906703_22906831_22907870
Isoform_73787_4	chr17	+	3036	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13392	1029	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.17537465175128	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACTGCATCAGTTTTTA	NA	False	NA	2	True	NA	NA	NA	22893308	22910470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_22893506_22905311_22905368_22906456_22906513_22906703_22906831_22907870
Isoform_73791_10	chr17	+	2025	7	NNC	ENSMUSG00000024160.17	novel	1949	7	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	67.8052767530342	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTGTGTCTATTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	25105727	25111122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_25106231_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_73792_20	chr17	+	1911	7	NNC	ENSMUSG00000024160.17	novel	1949	7	NA	NA	109	1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	67.8052767530342	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTGTGTCTATTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	25105841	25111122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_25106231_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_73794_11	chr17	+	3446	7	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	3091	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	397.7376647993	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6350968	6358589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_6351074_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
Isoform_73796_19	chr17	+	3845	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-483	-406	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	27.886675432304	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGGCCCAAACATGCT	NA	False	NA	NA	False	AATAAA	-19	NA	50815947	50995106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_50815976_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_73797_4	chr17	+	4263	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-490	5	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	27.886675432304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGTACATGCTTTTAGT	NA	False	NA	NA	False	ATTAAA	-26	NA	50815940	50995517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_50815976_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_73798_7	chr17	+	4508	18	NNC	ENSMUSG00000000708.15	novel	455	6	NA	NA	-7975	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	62.7882143526291	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53865913	53979748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_53866377_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
Isoform_73800_14	chr17	+	3387	27	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	178	60	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	36.6042323029074	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430785	66458444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_66430837_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
Isoform_73801_6	chr17	+	4134	27	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	150	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	36.6042323029074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAACTTCATGATCAAGT	NA	False	NA	22	True	ATTAAA	-17	NA	66430757	66459163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_66430837_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
Isoform_73802_3	chr17	+	2344	5	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	14	573	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	12.0933866224478	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCACGTTTGTGAGCAC	NA	False	NA	NA	False	AATAAA	-11	NA	21869558	21882029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_21869695_21871186_21871266_21875011_21875249_21876434_21876528_21880230
Isoform_73804_24	chr17	+	2556	5	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	49.3931928508373	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTCTCTCTCTCTGTC	NA	False	NA	3	True	AATAAA	-19	NA	21670640	21685850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_21670670_21672698_21672790_21676558_21676651_21681922_21682050_21683633
Isoform_73805_12	chr17	+	171	2	Intergenic	novelGene_4988	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATATTTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	45832714	46055103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_45832762_46054979
Isoform_73806_25	chr17	+	2283	5	NNC	ENSMUSG00000003198.11	novel	705	4	NA	NA	-53	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	13.1624465810882	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATTTATGTGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	56199414	56205929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_56199633_56199757_56199861_56202820_56202948_56203140_56203202_56204155
Isoform_73809_3	chr17	+	4727	2	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGCCTTGGGCTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	80540188	80553792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_80540458_80549334
Isoform_73810_7	chr17	+	2684	17	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.8747549010185	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3195	False	NA	8	True	AATAAA	-14	NA	34148516	34156657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_34148613_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_73813_3	chr17	+	4748	2	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGTGGCCTTGGGCTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	80540175	80553790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_80540468_80549334
Isoform_73816_17	chr17	+	632	4	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	5798	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	164.050805138733	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48043566	48045407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_48043651_48043885_48044037_48044681_48044781_48045109
Isoform_73818_10	chr17	+	1127	3	NNC	ENSMUSG00000024399.6	novel	1160	3	NA	NA	-7544	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCGGCCCTTGCCAGTGT	5187	False	NA	NA	False	AATAAA	-12	NA	35405870	35415278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35406083_35414025_35414342_35414679
Isoform_73820_8	chr17	+	1642	7	NNC	ENSMUSG00000024084.9	novel	864	3	NA	NA	10990	3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	82.476259210353	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAACTATTGCCTCTTT	NA	False	NA	1	True	AATATA	-17	NA	79370606	79397810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_79370670_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_73821_4	chr17	+	4314	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-341	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.5085458849755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCAGTACATGCTTTTAG	NA	False	NA	NA	False	ATTAAA	-25	NA	50816089	50995516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_50816177_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_73822_9	chr17	+	3876	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-311	-404	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.5085458849755	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50816119	50995108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_50816177_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_73824_4	chr17	+	388	3	Intergenic	novelGene_5216	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	3	29	junction_2	1.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTTTTTGTTGGTTTG	NA	False	NA	1	True	ACTAAA	-6	NA	88373882	88382153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_88373996_88381846_88381889_88381920
Isoform_73825_9	chr17	+	1737	2	Antisense	novelGene_ENSMUSG00000097624.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGGTCATTCATTG	NA	False	NA	8	True	NA	NA	NA	15461195	15463987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_15461391_15462445
Isoform_73828_6	chr17	+	2135	3	NNC	ENSMUSG00000023826.17	novel	3202	12	NA	NA	14771	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGCGTGTTTGTACCT	NA	False	NA	NA	False	AATAAA	-24	NA	12263573	12282251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_12263767_12269512_12269631_12280427
Isoform_73829_10	chr17	+	1488	3	NNC	ENSMUSG00000039269.6	novel	1290	2	NA	NA	-3383	-9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCGATTTCTCTCCGC	26	False	NA	NA	False	AATAAA	-14	NA	35874963	35879840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35875226_35878401_35878518_35878730
Isoform_73830_12	chr17	+	599	3	NNC	ENSMUSG00000023939.8	novel	510	2	NA	NA	-78	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	542	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTGAGCTGTGATC	NA	False	NA	36	True	AATAAA	-25	NA	46006263	46009420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_46006325_46006407_46006499_46008973
Isoform_73831_6	chr17	+	1079	4	NNC	ENSMUSG00000013766.12	novel	1142	3	NA	NA	-2709	-2	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	205.819230286083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTAAGAGAGCTGTCTG	NA	False	NA	18	True	NA	NA	NA	35293168	35297778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35293306_35296110_35296183_35296812_35296939_35297034
Isoform_73834_7	chr17	+	2036	7	NNC	ENSMUSG00000024160.17	novel	1953	7	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	70.7248188403477	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTGTGTCTATTG	NA	False	NA	NA	False	ATTAAA	-19	NA	25105703	25111120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_25106220_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_73836_10	chr17	+	1099	2	Antisense	novelGene_ENSMUSG00000073377.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	64841674	64843389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_64841801_64842416
Isoform_73837_4	chr17	+	3246	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	79	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.1343417071988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4587	False	NA	21	True	AATAAA	-23	NA	35828151	35841903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35828862_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_73838_4	chr17	+	2606	4	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-362	12	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	105.776493923114	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17341314	17367105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_17341348_17362997_17363125_17363366_17363428_17364720
Isoform_73840_4	chr17	+	3132	22	NNC	ENSMUSG00000034709.9	novel	1112	5	NA	NA	-20305	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.4483098427585	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAACTTTTCGGTCTGTG	NA	False	NA	10	True	AATAAA	-11	NA	88817240	88895789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_88817439_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
Isoform_73841_5	chr17	+	3138	22	NNC	ENSMUSG00000023938.9	novel	2956	11	NA	NA	321	-4	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	45.0490788044971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTGTGTG	NA	False	NA	15	True	AATACA	-29	NA	45818087	45831765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_45818122_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
Isoform_73844_4	chr17	+	2529	16	NNC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	531	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.8554582259724	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAACTCCCAGCATTT	NA	False	NA	4	True	AATAAA	-13	NA	6930943	7005441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_6931018_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
Isoform_73845_6	chr17	+	3557	6	NNC	ENSMUSG00000025738.9	novel	3489	6	NA	NA	-57	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.7086164228309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGGGTTATTATTTTT	NA	False	NA	3	True	ATTAAA	-15	NA	26028001	26040235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_26028366_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347
Isoform_73846_3	chr17	+	2061	3	NNC	ENSMUSG00000023826.17	novel	3202	12	NA	NA	14775	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAAAGCGTGTTTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	12263577	12282248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_12263700_12269512_12269631_12280427
Isoform_73853_3	chr17	+	2629	11	NNC	ENSMUSG00000064120.15	novel	447	4	NA	NA	-536	-2	intron_retention	FALSE	canonical	1	2	junction_1	11.0290525431698	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGATTGGGGACTCTT	949	False	NA	4	True	AATAAA	-20	NA	49739687	49762458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_49739874_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057
Isoform_73859_4	chr17	+	1275	7	NNC	ENSMUSG00000050762.6	novel	1253	6	NA	NA	-452	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.47430819985168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAGAA	4079	False	NA	NA	False	NA	NA	NA	24256665	24264922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_24256829_24257252_24257336_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
Isoform_73864_3	chr17	+	597	3	Intergenic	novelGene_4774	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATTACATGTGTCCCA	NA	False	NA	NA	False	AATAAA	-39	NA	25975633	25977642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_25975749_25976240_25976421_25977340
Isoform_73879_8	chr17	+	175	1	Intergenic	novelGene_4778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26269737	26269912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_26269700_26269900
Isoform_73880_12	chr17	-	2293	1	NIC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	2	-30980	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATGTAATCAGTTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	26288517	26286224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26286200_26288500
Isoform_73882_9	chr17	+	177	1	Intergenic	novelGene_4779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTTTAAGACAC	NA	False	NA	NA	False	NA	NA	NA	26312074	26312251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_26312100_26312300
Isoform_73883_13	chr17	-	2059	1	NIC	ENSMUSG00000024177.10	novel	1006	5	NA	NA	0	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	26314447	26312388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_26312400_26314400
Isoform_73887_4	chr17	+	177	1	Intergenic	novelGene_4780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATTATATTTAA	NA	False	NA	NA	False	NA	NA	NA	26326463	26326640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_26326500_26326600
Isoform_73888_4	chr17	-	181	1	Intergenic	novelGene_4781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAATACCCA	NA	False	NA	NA	False	NA	NA	NA	26327423	26327242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26327200_26327400
Isoform_73890_10	chr1	-	177	1	Intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	118653125	118652948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_118652900_118653100
Isoform_73892_40	chr15	+	175	1	Intergenic	novelGene_3994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	77728070	77728245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_77728100_77728200
Isoform_73894_10	chr17	+	177	1	Intergenic	novelGene_4783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	26465676	26465853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_26465700_26465900
Isoform_73897_7	chr17	-	174	1	Intergenic	novelGene_4657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCAAATTCACTTTCAT	NA	False	NA	NA	False	NA	NA	NA	6162229	6162055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6162100_6162200
Isoform_73900_3	chr17	-	351	1	Intergenic	novelGene_4784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAACAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	26491607	26491256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26491300_26491600
Isoform_73910_3	chr17	-	155	1	Intergenic	novelGene_4785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGGTAGAATCTA	9371	False	NA	NA	False	NA	NA	NA	26522318	26522163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26522200_26522300
Isoform_73916_17	chr17	-	992	1	FSM	ENSMUSG00000051639.4	ENSMUST00000061073.2	957	1	112	-147	112	147	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATCCTAGCTGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	6172327	6171335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_6171300_6172300
Isoform_73919_49	chr17	-	198	1	Genic_Genomic	ENSMUSG00000118107.2	novel	NA	NA	NA	NA	23196	44	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGACTGTTTTCCCA	NA	False	NA	NA	False	AAAAAG	-18	NA	26686687	26686489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_-_26686500_26686700
Isoform_73922_408	chr7	-	180	1	Intergenic	novelGene_10078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49211017	49210837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_49210800_49211000
Isoform_73924_3	chr17	+	3570	1	NIC	ENSMUSG00000015575.16	novel	494	4	NA	NA	5	-28673	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	26882209	26885779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26882200_26885800
Isoform_73926_13	chr17	-	2652	1	Intergenic	novelGene_4788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGGGGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	26913274	26910622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26910600_26913300
Isoform_73927_4	chr17	+	1340	1	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	2	-25968	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAACAAAAACAAAA	1282	False	NA	NA	False	NA	NA	NA	26934625	26935965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26934600_26936000
Isoform_73931_4	chr17	-	164	1	Intergenic	novelGene_4789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	3543	False	NA	NA	False	NA	NA	NA	26953377	26953213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26953200_26953400
Isoform_73932_12	chr17	-	182	1	Intergenic	novelGene_4790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGGAGAGAGCT	7348	False	NA	NA	False	NA	NA	NA	26965691	26965509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26965500_26965700
Isoform_73933_3	chr17	+	174	1	Intergenic	novelGene_4791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	7673	False	NA	NA	False	NA	NA	NA	27046299	27046473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27046300_27046500
Isoform_73934_3	chr17	-	177	1	Intergenic	novelGene_4658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTTTCAGTG	NA	False	NA	NA	False	NA	NA	NA	6193071	6192894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6192900_6193100
Isoform_73935_29	chr17	+	179	1	Intergenic	novelGene_4792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTATATTTTCTATTC	5307	False	NA	NA	False	NA	NA	NA	27090283	27090462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27090300_27090500
Isoform_73936_24	chr17	-	307	1	Intergenic	novelGene_4793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAAGAATGTGGATT	177	False	NA	NA	False	NA	NA	NA	27133738	27133431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_27133400_27133700
Isoform_73937_32	chr17	+	1392	1	NIC	ENSMUSG00000024301.11	novel	819	3	NA	NA	11	-3015	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGGAAAACAAACCCA	NA	False	NA	NA	False	NA	NA	NA	27136075	27137467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_27136100_27137500
Isoform_73940_5	chr17	-	169	1	Intergenic	novelGene_4794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAAGAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	27150410	27150241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_27150200_27150400
Isoform_73942_57	chr17	+	176	1	Intergenic	novelGene_4795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	6961	False	NA	NA	False	NA	NA	NA	27210304	27210480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27210300_27210500
Isoform_73943_7	chr17	-	3005	1	Genic_Genomic	ENSMUSG00000116995.2	novel	NA	NA	NA	NA	-10	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3165080	3162075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_-_3162100_3165100
Isoform_73944_3	chr17	-	3075	1	Genic_Genomic	ENSMUSG00000116995.2	novel	NA	NA	NA	NA	-80	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3165150	3162075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_-_3162100_3165200
Isoform_73946_4	chr17	+	885	1	Intergenic	novelGene_4796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	27217018	27217903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27217000_27217900
Isoform_73947_43	chr17	-	179	1	Intergenic	novelGene_4797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAGAAATGATG	NA	False	NA	NA	False	NA	NA	NA	27217368	27217189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_27217200_27217400
Isoform_73951_7	chr17	+	157	1	Intergenic	novelGene_4798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATACATA	NA	False	NA	NA	False	NA	NA	NA	27250948	27251105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27250900_27251100
Isoform_73953_3	chr17	-	157	1	Intergenic	novelGene_4799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	27263671	27263514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_27263500_27263700
Isoform_73954_6	chr17	-	187	1	Intergenic	novelGene_4800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATCAAAACAGGG	NA	False	NA	NA	False	NA	NA	NA	27275053	27274866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_27274900_27275100
Isoform_73956_23	chr17	+	175	1	Intergenic	novelGene_4801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACAAAACCAACCACCT	NA	False	NA	NA	False	NA	NA	NA	27366863	27367038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27366900_27367000
Isoform_73957_16	chr17	-	178	1	Intergenic	novelGene_4802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAATAAATAAGCCG	NA	False	NA	NA	False	NA	NA	NA	27396555	27396377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_27396400_27396600
Isoform_73959_5	chr17	+	1505	1	Antisense	novelGene_ENSMUSG00000044857.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCAACTCTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	27422676	27424181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_27422700_27424200
Isoform_73960_14	chr17	+	172	1	Intergenic	novelGene_4803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	27439155	27439327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27439200_27439300
Isoform_73961_5	chr17	+	214	1	Intergenic	novelGene_4804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	27450756	27450970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27450800_27451000
Isoform_73965_26	chr17	+	173	1	Antisense	novelGene_ENSMUSG00000116657.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTTTTAATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	27764513	27764686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_27764500_27764700
Isoform_73971_20	chr11	+	264	1	Intergenic	novelGene_1477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTCAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AATAAA	-23	NA	46356664	46356928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_46356700_46356900
Isoform_73973_3	chr17	-	1932	1	NIC	ENSMUSG00000062753.15	novel	862	5	NA	NA	3	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGTTGCCCTCCTTGGG	NA	False	NA	44	True	AATAAA	-13	NA	27784679	27782747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_27782700_27784700
Isoform_73974_42	chr17	+	175	1	Intergenic	novelGene_4805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACTTTTGG	NA	False	NA	NA	False	NA	NA	NA	27792358	27792533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27792400_27792500
Isoform_73978_43	chr17	-	177	1	Intergenic	novelGene_4806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGGACAGTGATGGAC	NA	False	NA	NA	False	NA	NA	NA	27838497	27838320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_27838300_27838500
Isoform_73979_6	chr17	+	166	1	Intergenic	novelGene_4807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAACAA	7679	False	NA	NA	False	NA	NA	NA	27847887	27848053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27847900_27848100
Isoform_73982_365	chr17	+	154	1	Intergenic	novelGene_4808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	27893585	27893739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_27893600_27893700
Isoform_73993_7	chr17	-	2198	1	ISM	ENSMUSG00000056692.14	ENSMUST00000114863.10	3892	5	67170	23	66997	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAAAAACCCCGCCT	NA	False	NA	-24	True	ATTAAA	-11	NA	27972429	27970231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_27970200_27972400
Isoform_73995_5	chr17	-	1301	2	NNC	ENSMUSG00000056692.14	novel	3892	5	NA	NA	67869	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCCGCCTTT	NA	False	NA	-22	True	ATTAAA	-13	NA	27971557	27970229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_27970726_27970752
Isoform_73996_4	chr17	+	178	1	Intergenic	novelGene_4809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28021507	28021685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_28021500_28021700
Isoform_74007_12	chr17	-	2157	1	Antisense	novelGene_ENSMUSG00000117130.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACTGTAACCAGCAGCC	8376	False	NA	NA	False	NA	NA	NA	28203174	28201017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_28201000_28203200
Isoform_74008_4	chr17	-	2413	1	Antisense	novelGene_ENSMUSG00000117130.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACTGTAACCAGCAGCC	8120	False	NA	NA	False	NA	NA	NA	28203430	28201017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_28201000_28203400
Isoform_74009_14	chr17	+	900	1	Genic_Genomic	ENSMUSG00000038141.12	novel	NA	NA	NA	NA	-5	-34400	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAGTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6320739	6321639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_+_6320700_6321600
Isoform_74011_92	chr17	-	186	1	Intergenic	novelGene_4810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGAAATCTGATTATG	NA	False	NA	NA	False	NA	NA	NA	28283184	28282998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_28283000_28283200
Isoform_74012_20	chr17	+	176	1	Intergenic	novelGene_4811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAAGAAAC	3266	False	NA	NA	False	NA	NA	NA	28283552	28283728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_28283600_28283700
Isoform_74015_6	chr17	-	158	1	Intergenic	novelGene_4812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	28312913	28312755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_28312800_28312900
Isoform_74017_3	chr17	-	3020	1	FSM	ENSMUSG00000117171.2	ENSMUST00000233181.2	3026	1	7	-1	7	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTCTGCGTTAAAAAGA	NA	False	NA	NA	False	TATAAA	-17	NA	28396649	28393629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_28393600_28396600
Isoform_74018_8	chr17	+	179	1	Intergenic	novelGene_4813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28406469	28406648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_28406500_28406600
Isoform_74019_53	chr17	-	184	1	Intergenic	novelGene_4814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACATACCC	512	False	NA	NA	False	NA	NA	NA	28418002	28417818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_28417800_28418000
Isoform_74022_12	chr17	-	183	1	Intergenic	novelGene_4815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATGATAAGGGA	NA	False	NA	NA	False	NA	NA	NA	28523127	28522944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_28522900_28523100
Isoform_74023_6	chr17	+	1512	1	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	6602	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	NA	False	NA	13	True	AATAAA	-15	NA	28544030	28545542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_28544000_28545500
Isoform_74026_33	chr17	-	178	1	Intergenic	novelGene_4816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTGGG	6461	False	NA	NA	False	NA	NA	NA	28597099	28596921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_28596900_28597100
Isoform_7403_107	chr10	+	1559	11	FSM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	32	814	0	0	multi-exon	FALSE	canonical	3	212	junction_7	154.06131896099	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	1132	False	NA	13	True	NA	NA	NA	80941780	80959717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
Isoform_74048_6	chr17	+	158	1	Intergenic	novelGene_4817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	28667994	28668152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_28668000_28668200
Isoform_74049_38	chr17	+	237	1	Intergenic	novelGene_4818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAGAAAATTACTGTGC	2675	False	NA	NA	False	NA	NA	NA	28695309	28695546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_28695300_28695500
Isoform_7405_155	chr10	+	1541	11	FSM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	71	793	14	21	multi-exon	FALSE	canonical	3	212	junction_7	154.06131896099	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTGTTGTGACCTCAC	1171	False	NA	34	True	NA	NA	NA	80941819	80959738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
Isoform_74051_5	chr17	-	172	1	Intergenic	novelGene_4819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAGAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	28720772	28720600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_28720600_28720800
Isoform_74052_7	chr17	+	2063	1	FSM	ENSMUSG00000066170.8	ENSMUST00000095448.5	2055	1	-5	-3	-5	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28742261	28744324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28742300_28744300
Isoform_74053_7	chr17	+	1835	1	FSM	ENSMUSG00000066170.8	ENSMUST00000095448.5	2055	1	-34	254	-34	-254	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTAGTCATGATGTTT	NA	False	NA	NA	False	NA	NA	NA	28742232	28744067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_28742200_28744100
Isoform_74055_47	chr17	-	182	1	Intergenic	novelGene_4820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	28778353	28778171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_28778200_28778400
Isoform_74058_9	chr17	-	176	1	Intergenic	novelGene_4821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGAGT	NA	False	NA	NA	False	NA	NA	NA	28786267	28786091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_28786100_28786300
Isoform_74062_7	chr4	-	157	1	Intergenic	novelGene_8274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9903	False	NA	NA	False	NA	NA	NA	152120994	152120837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_152120800_152121000
Isoform_74063_31	chr17	+	188	1	Intergenic	novelGene_4822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	28843211	28843399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_28843200_28843400
Isoform_74065_8	chr17	+	292	1	Intergenic	novelGene_4823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAAAAAAAACGCTGTTC	2659	False	NA	NA	False	NA	NA	NA	28850637	28850929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_28850600_28850900
Isoform_74068_32	chr17	-	184	1	Intergenic	novelGene_4824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTAAGATGATAATACCA	NA	False	NA	NA	False	NA	NA	NA	28952966	28952782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_28952800_28953000
Isoform_74070_6	chr17	-	186	1	Antisense	novelGene_ENSMUSG00000004864.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTCAGGGCTTGTC	8740	False	NA	NA	False	NA	NA	NA	28999373	28999187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_28999200_28999400
Isoform_74071_4	chr17	-	177	1	Intergenic	novelGene_4825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAAATAAATG	4809	False	NA	NA	False	NA	NA	NA	29003304	29003127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29003100_29003300
Isoform_74073_6	chr17	-	316	1	Intergenic	novelGene_4826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAACGAAAAAA	1517	False	NA	NA	False	NA	NA	NA	29006596	29006280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29006300_29006600
Isoform_74076_3	chr17	-	165	1	Intergenic	novelGene_4827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGATTAATCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	29061061	29060896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29060900_29061100
Isoform_74078_7	chr17	-	156	1	Intergenic	novelGene_4828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	29105318	29105162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29105200_29105300
Isoform_74079_7	chr17	-	443	1	Intergenic	novelGene_4829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAACTAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	29114256	29113813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29113800_29114300
Isoform_74081_12	chr17	-	175	1	Intergenic	novelGene_4830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATCTTTTTTTTTTAAAT	5676	False	NA	NA	False	NA	NA	NA	29143306	29143131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29143100_29143300
Isoform_74082_15	chr17	-	177	1	Intergenic	novelGene_4831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATTATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29149211	29149034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29149000_29149200
Isoform_74083_31	chr17	-	851	1	Intergenic	novelGene_4832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	5367	False	NA	NA	False	NA	NA	NA	29178652	29177801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29177800_29178700
Isoform_74100_4	chr17	+	208	1	Intergenic	novelGene_4833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCCCTGGATGGCCTG	NA	False	NA	NA	False	NA	NA	NA	29222282	29222490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29222300_29222500
Isoform_74103_12	chr17	+	179	1	Intergenic	novelGene_4834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATATATATAATTTATT	NA	False	NA	NA	False	NA	NA	NA	29230439	29230618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29230400_29230600
Isoform_74106_17	chr17	+	175	1	Intergenic	novelGene_4835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTACTCGTGT	NA	False	NA	NA	False	NA	NA	NA	29246877	29247052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29246900_29247100
Isoform_74107_23	chr17	+	173	1	Intergenic	novelGene_4836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTCTTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	29249640	29249813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29249600_29249800
Isoform_74108_11	chr17	-	415	1	FSM	ENSMUSG00000086154.3	ENSMUST00000233751.2	1708	1	65	1228	65	-1228	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29251477	29251062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29251100_29251500
Isoform_7411_536	chr10	+	1553	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	23	-20	-2	20	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTGTTGTGACCTCA	1155	False	NA	33	True	NA	NA	NA	80941803	80959737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
Isoform_74111_3	chr17	-	2664	1	Antisense	novelGene_ENSMUSG00000071172.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACCAACCAACCAAAAAA	4284	False	NA	NA	False	NA	NA	NA	29259846	29257182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_29257200_29259800
Isoform_7412_127	chr10	+	1601	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	-23	-22	9	22	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTGTGACCTCACT	1109	False	NA	35	True	NA	NA	NA	80941757	80959739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
Isoform_74123_53	chr17	-	174	1	Intergenic	novelGene_4837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTGCTC	903	False	NA	NA	False	NA	NA	NA	29263227	29263053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29263100_29263200
Isoform_74124_136	chr17	-	198	1	Intergenic	novelGene_4838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	29265858	29265660	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29265700_29265900
Isoform_74125_41	chr17	+	154	1	Intergenic	novelGene_4839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTTTTGAGACAGG	2580	False	NA	4	True	NA	NA	NA	29271521	29271675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29271500_29271700
Isoform_74126_3	chr17	-	173	1	Intergenic	novelGene_4840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAATCTCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	29296010	29295837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29295800_29296000
Isoform_74127_14	chr17	+	174	1	Intergenic	novelGene_4841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAATATTCAAG	NA	False	NA	NA	False	NA	NA	NA	29307402	29307576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29307400_29307600
Isoform_74129_71	chr17	-	2023	1	Antisense	novelGene_ENSMUSG00000023067.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29318922	29316899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_29316900_29318900
Isoform_7413_54	chr10	+	1992	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	21	-457	-4	-357	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGGGAGTGTCTGCAC	1153	False	NA	31	True	AATACA	-25	NA	80941801	80960174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
Isoform_74139_122	chr17	-	178	1	Intergenic	novelGene_4787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATAGGAA	NA	False	NA	NA	False	NA	NA	NA	26894793	26894615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26894600_26894800
Isoform_74140_57	chr17	-	175	1	Intergenic	novelGene_4843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	3766	False	NA	NA	False	NA	NA	NA	29344155	29343980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29344000_29344200
Isoform_74141_131	chr17	-	421	1	FSM	ENSMUSG00000067575.6	ENSMUST00000147311.2	333	1	-53	-35	-53	35	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAATAAAAAA	NA	False	NA	NA	False	TTTAAA	-35	NA	29356331	29355910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29355900_29356300
Isoform_74143_6	chr17	-	171	1	Intergenic	novelGene_4844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAAAAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	29356526	29356355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29356400_29356500
Isoform_74145_22	chr17	-	334	1	Intergenic	novelGene_4845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAGTAATTTAATAGC	6115	False	NA	NA	False	NA	NA	NA	29392015	29391681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29391700_29392000
Isoform_74146_34	chr17	-	156	1	Intergenic	novelGene_4846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCCAGAGAAAGCAGGAAC	6115	False	NA	NA	False	NA	NA	NA	29392015	29391859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29391900_29392000
Isoform_74148_120	chr17	+	176	1	Intergenic	novelGene_4847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGACAGAAGG	NA	False	NA	NA	False	NA	NA	NA	29411794	29411970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29411800_29412000
Isoform_74149_6	chr17	+	181	1	Intergenic	novelGene_4848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATGGATAA	NA	False	NA	NA	False	NA	NA	NA	29413746	29413927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29413700_29413900
Isoform_74155_23	chr15	+	201	1	Intergenic	novelGene_3755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCGAAGGTTGACTAACAT	NA	False	NA	NA	False	NA	NA	NA	8036214	8036415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_8036200_8036400
Isoform_74158_106	chr17	+	181	1	Intergenic	novelGene_4850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29572941	29573122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29572900_29573100
Isoform_74159_74	chr17	+	202	1	Intergenic	novelGene_4851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAATTGTGTAGGTATGT	NA	False	NA	34	True	NA	NA	NA	29577205	29577407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29577200_29577400
Isoform_74162_3	chr17	-	159	1	Intergenic	novelGene_4852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATACATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	29606159	29606000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29606000_29606200
Isoform_74163_4	chr17	+	176	1	Intergenic	novelGene_4661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAATTCCTGTCTATT	NA	False	NA	NA	False	NA	NA	NA	6639475	6639651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_6639500_6639700
Isoform_74164_265	chr17	-	179	1	ISM	ENSMUSG00000097125.3	ENSMUST00000234190.2	417	2	17641	12	17046	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACACAGAGA	NA	False	NA	NA	False	NA	NA	NA	29666083	29665904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_29665900_29666100
Isoform_74165_3	chr17	-	303	1	Intergenic	novelGene_4853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAACCAAAAAACAAAA	5683	False	NA	NA	False	NA	NA	NA	29685566	29685263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29685300_29685600
Isoform_74176_7	chr17	-	489	1	Antisense	novelGene_ENSMUSG00000024014.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAACCAAACCAA	1918	False	NA	NA	False	NA	NA	NA	29715080	29714591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_29714600_29715100
Isoform_74179_3	chr17	+	171	1	Intergenic	novelGene_4854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAGATTTATTTAT	6865	False	NA	NA	False	NA	NA	NA	29723996	29724167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29724000_29724200
Isoform_74180_49	chr17	-	1216	1	FSM	ENSMUSG00000091614.3	ENSMUST00000168877.2	510	1	-53	-653	-53	14	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	29738817	29737601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_29737600_29738800
Isoform_74185_7	chr17	+	208	1	Intergenic	novelGene_4855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAACACAAA	2452	False	NA	NA	False	AATAAA	-10	NA	29771804	29772012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29771800_29772000
Isoform_74186_368	chr17	-	175	1	Intergenic	novelGene_4856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAACC	NA	False	NA	NA	False	NA	NA	NA	29780234	29780059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29780100_29780200
Isoform_74187_73	chr17	-	175	1	Intergenic	novelGene_4857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAACAGTTC	NA	False	NA	NA	False	NA	NA	NA	29784408	29784233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29784200_29784400
Isoform_74188_28	chr17	+	181	1	Intergenic	novelGene_4858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	29793047	29793228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_29793000_29793200
Isoform_74189_28	chr17	-	205	1	Intergenic	novelGene_4859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTGTGAACCACTTT	NA	False	NA	NA	False	NA	NA	NA	29827636	29827431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29827400_29827600
Isoform_74190_12	chr17	-	214	1	Intergenic	novelGene_4860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCATGTATGTCTCTG	9569	False	NA	NA	False	NA	NA	NA	29832779	29832565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29832600_29832800
Isoform_74191_8	chr17	+	1353	1	FSM	ENSMUSG00000090083.12	ENSMUST00000234498.2	686	1	21	-688	-5	688	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	29833858	29835211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_29833900_29835200
Isoform_74192_5	chr17	-	158	1	Intergenic	novelGene_4861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3226	False	NA	NA	False	NA	NA	NA	29849529	29849371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_29849400_29849500
Isoform_74196_276	chr18	+	179	1	Intergenic	novelGene_5363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	3833	False	NA	NA	False	NA	NA	NA	35777636	35777815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35777600_35777800
Isoform_74199_13	chr11	+	177	1	Intergenic	novelGene_1681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	69706999	69707176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_69707000_69707200
Isoform_74200_7	chr17	+	212	1	Intergenic	novelGene_4862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAAAGATTTTTTTA	NA	False	NA	NA	False	TTTAAA	-1	NA	30154664	30154876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_30154700_30154900
Isoform_74201_17	chr17	-	179	1	Intergenic	novelGene_4863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAGCAATTTAA	NA	False	NA	NA	False	NA	NA	NA	30157742	30157563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_30157600_30157700
Isoform_74202_13	chr17	+	173	1	Intergenic	novelGene_4864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAAACTGATCATT	NA	False	NA	NA	False	NA	NA	NA	30219801	30219974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_30219800_30220000
Isoform_74203_11	chr17	+	172	1	Intergenic	novelGene_4662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAGAGAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	6684024	6684196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_6684000_6684200
Isoform_74204_14	chr17	-	176	1	Intergenic	novelGene_4865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	30245544	30245368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_30245400_30245500
Isoform_74207_6	chr17	-	166	1	Intergenic	novelGene_4663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGAGCTGTCATGGTAA	NA	False	NA	NA	False	NA	NA	NA	6697096	6696930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6696900_6697100
Isoform_74208_4	chr17	+	1412	1	FSM	ENSMUSG00000117725.2	ENSMUST00000235695.2	6295	1	-279	5162	-279	-5159	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGTCCCCAATTTATTT	794	False	NA	NA	False	AATACA	-15	NA	30794994	30796406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_30795000_30796400
Isoform_74209_27	chr17	+	169	1	FSM	ENSMUSG00000117725.2	ENSMUST00000235695.2	6295	1	6115	11	5947	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATATAATCTGATTAT	719	False	NA	NA	False	NA	NA	NA	30801388	30801557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_30801400_30801600
Isoform_74222_12	chr17	+	320	1	Antisense	novelGene_ENSMUSG00000024026.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30815477	30815797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_30815500_30815800
Isoform_74223_3	chr17	+	175	1	Intergenic	novelGene_4866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	30824785	30824960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_30824800_30825000
Isoform_74225_4	chr17	-	1874	1	NIC	ENSMUSG00000099474.2	novel	845	4	NA	NA	2583	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCGAATTCTTTCCT	NA	False	NA	-9	True	AATAAA	-17	NA	30843296	30841422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_30841400_30843300
Isoform_74226_25	chr4	+	177	1	Intergenic	novelGene_8149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTC	NA	False	NA	NA	False	NA	NA	NA	143019452	143019629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_143019500_143019600
Isoform_74229_179	chr5	-	176	1	Intergenic	novelGene_9164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6189	False	NA	NA	False	NA	NA	NA	149763315	149763139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_149763100_149763300
Isoform_74232_5	chr17	-	617	1	Intergenic	novelGene_4868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31092914	31092297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_31092300_31092900
Isoform_74240_4	chr17	+	179	1	Intergenic	novelGene_4869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGTATATTGAA	7159	False	NA	NA	False	NA	NA	NA	31160028	31160207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_31160000_31160200
Isoform_74243_10	chr17	-	783	1	Antisense	novelGene_ENSMUSG00000024030.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31334287	31333504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_31333500_31334300
Isoform_74246_4	chr17	+	171	1	Intergenic	novelGene_4870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGCATGTGGACA	NA	False	NA	NA	False	NA	NA	NA	31459531	31459702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_31459500_31459700
Isoform_74247_94	chr17	+	170	1	ISM	ENSMUSG00000042345.16	ENSMUST00000236745.2	7635	14	36929	1921	9319	-1921	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	31463775	31463945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_31463800_31463900
Isoform_7425_51	chr10	+	1881	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-39	-1	-39	1	multi-exon	FALSE	canonical	3	10	junction_1	36.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972343	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80972494_80979795_80981052_80983803
Isoform_74255_11	chr17	-	1060	1	Antisense	novelGene_ENSMUSG00000024036.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	5914	False	NA	NA	False	NA	NA	NA	31506374	31505314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_31505300_31506400
Isoform_74256_102	chr13	+	177	1	Intergenic	novelGene_3350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114135902	114136079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_114135900_114136100
Isoform_74257_49	chr17	+	213	1	Intergenic	novelGene_4659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTTTGGCCTGTTTTG	NA	False	NA	NA	False	AAAACA	-16	NA	6341236	6341449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_6341200_6341400
Isoform_7426_16	chr10	+	3026	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-37	-1148	-37	1133	multi-exon	FALSE	canonical	3	10	junction_1	36.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGGTAGAATCCACTT	NA	False	NA	7	True	AATAAA	-16	NA	80972345	80985425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80972494_80979795_80981052_80983803
Isoform_74260_30	chr17	+	184	1	Intergenic	novelGene_4871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTATAAAAAAAATCCAC	NA	False	NA	NA	False	NA	NA	NA	31633624	31633808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_31633600_31633800
Isoform_74261_7	chr17	-	184	1	Intergenic	novelGene_4872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAATAATAATAA	9527	False	NA	NA	False	NA	NA	NA	31668992	31668808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_31668800_31669000
Isoform_74262_5	chr17	+	775	1	Intergenic	novelGene_4664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6728752	6729527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_6728800_6729500
Isoform_74265_7	chr17	-	1222	1	Intergenic	novelGene_4665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGATGTCTAAAAAAAT	2348	False	NA	NA	False	NA	NA	NA	6744541	6743319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6743300_6744500
Isoform_74267_90	chr17	-	194	1	Intergenic	novelGene_4873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTAGTCAAGTTGTGAT	9148	False	NA	NA	False	NA	NA	NA	31861884	31861690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_31861700_31861900
Isoform_7427_17	chr10	+	2017	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-175	-1	103	1	multi-exon	FALSE	canonical	3	10	junction_1	36.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972207	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80972494_80979795_80981052_80983803
Isoform_74272_12	chr17	-	166	1	Intergenic	novelGene_4874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAAACCCCAC	5716	False	NA	NA	False	NA	NA	NA	31865316	31865150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_31865200_31865300
Isoform_74275_54	chr17	+	1158	1	Antisense	novelGene_ENSMUSG00000061613.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	31872750	31873908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_31872800_31873900
Isoform_74279_6	chr17	-	176	1	Intergenic	novelGene_4875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGAAAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	31888120	31887944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_31887900_31888100
Isoform_7428_8	chr10	+	2194	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-352	-1	-74	1	multi-exon	FALSE	canonical	3	10	junction_1	36.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972030	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80972494_80979795_80981052_80983803
Isoform_74280_7	chr17	-	177	1	Intergenic	novelGene_4876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTCTAAAAAAAAAAAA	2064	False	NA	NA	False	NA	NA	NA	31903796	31903619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_31903600_31903800
Isoform_74282_13	chr17	-	3499	1	Intergenic	novelGene_4666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	6757846	6754347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6754300_6757800
Isoform_74283_272	chr17	-	177	1	Intergenic	novelGene_4877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAGAACACAC	NA	False	NA	NA	False	NA	NA	NA	31914464	31914287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_31914300_31914500
Isoform_74284_19	chr17	-	224	1	Intergenic	novelGene_4878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGACCAGCATCGTTGA	NA	False	NA	NA	False	NA	NA	NA	31916395	31916171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_31916200_31916400
Isoform_74285_3	chr17	+	562	1	Intergenic	novelGene_4879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32002797	32003359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32002800_32003400
Isoform_74286_8	chr17	+	175	1	Intergenic	novelGene_4880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTTATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	32026493	32026668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32026500_32026700
Isoform_74287_10	chr17	-	3578	1	Genic_Genomic	ENSMUSG00000024042.8	novel	NA	NA	NA	NA	-19	-711	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32074797	32071219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_-_32071200_32074800
Isoform_74296_49	chr17	+	174	1	Intergenic	novelGene_4881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTGGGTTTATTC	6747	False	NA	NA	False	NA	NA	NA	32291537	32291711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32291500_32291700
Isoform_74297_584	chr17	+	183	1	Intergenic	novelGene_4882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	584	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAGAAATGTTTA	NA	False	NA	NA	False	AATAAA	-6	NA	32331642	32331825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32331600_32331800
Isoform_74298_6	chr17	+	172	1	Intergenic	novelGene_4883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32353854	32354026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32353900_32354000
Isoform_74300_4	chr17	+	2852	1	Intergenic	novelGene_4884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAACACC	NA	False	NA	NA	False	NA	NA	NA	32411221	32414073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32411200_32414100
Isoform_74304_3	chr16	+	168	1	Intergenic	novelGene_4502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33638224	33638392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_33638200_33638400
Isoform_74305_15	chr17	-	185	1	Intergenic	novelGene_4885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32448216	32448031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_32448000_32448200
Isoform_74307_11	chr17	+	1957	1	Antisense	novelGene_ENSMUSG00000116560.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9982	False	NA	NA	False	AAAAAG	-34	NA	6792846	6794803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_6792800_6794800
Isoform_74308_78	chr17	+	162	1	Intergenic	novelGene_4886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGAGCCGGGCGT	NA	False	NA	NA	False	NA	NA	NA	32466830	32466992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32466800_32467000
Isoform_74309_4	chr17	+	178	1	Intergenic	novelGene_4887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGTCCACTGG	NA	False	NA	NA	False	NA	NA	NA	32481446	32481624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32481400_32481600
Isoform_7431_9	chr10	+	2998	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	309	2631	2	1133	multi-exon	FALSE	canonical	3	9	junction_1	37	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGGTAGAATCCACTT	NA	False	NA	7	True	AATAAA	-16	NA	80972413	80985425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80972534_80979795_80981052_80983803
Isoform_74312_3	chr17	+	171	1	Intergenic	novelGene_4888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	32505086	32505257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32505100_32505300
Isoform_74313_78	chr17	-	180	1	Intergenic	novelGene_4889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGGGAAATAAGC	NA	False	NA	NA	False	NA	NA	NA	32508331	32508151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_32508200_32508300
Isoform_74314_63	chr17	-	175	1	Intergenic	novelGene_4667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATGTAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	6796408	6796233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6796200_6796400
Isoform_74317_30	chr17	-	174	1	Intergenic	novelGene_4890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	7619	False	NA	NA	False	NA	NA	NA	32516454	32516280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_32516300_32516500
Isoform_74318_23	chr17	-	177	1	Intergenic	novelGene_4891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAACCACATAACC	4077	False	NA	NA	False	NA	NA	NA	32519996	32519819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_32519800_32520000
Isoform_7432_41	chr10	+	1837	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	323	3778	16	1	multi-exon	FALSE	canonical	3	9	junction_1	37	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972427	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80972534_80979795_80981052_80983803
Isoform_74321_68	chr17	+	189	1	Intergenic	novelGene_4892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTTCTTCTTCTTCTT	143	False	NA	NA	False	NA	NA	NA	32538503	32538692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32538500_32538700
Isoform_74325_28	chr17	-	1415	1	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	4	-2584	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32540155	32538740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_32538700_32540200
Isoform_74327_4	chr17	+	176	1	Intergenic	novelGene_4893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGCGAGCAGAGGT	8666	False	NA	NA	False	NA	NA	NA	32547026	32547202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32547000_32547200
Isoform_7433_16	chr10	+	1875	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	285	3778	7	1	multi-exon	FALSE	canonical	3	9	junction_1	37	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972389	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80972534_80979795_80981052_80983803
Isoform_74332_22	chr17	+	194	1	Intergenic	novelGene_4896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGAGTGGAG	NA	False	NA	NA	False	NA	NA	NA	32952137	32952331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_32952100_32952300
Isoform_74337_6	chr17	+	171	1	Intergenic	novelGene_4668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGAAGTAAA	4676	False	NA	NA	False	NA	NA	NA	6833152	6833323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_6833200_6833300
Isoform_74339_4	chr17	+	278	1	Intergenic	novelGene_4897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATCCCTTTATAACAT	NA	False	NA	NA	False	NA	NA	NA	33056099	33056377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_33056100_33056400
Isoform_74341_19	chr17	+	177	1	NIC	ENSMUSG00000117601.2	novel	438	2	NA	NA	193	-714	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATTTAAAAAAAAAG	5916	False	NA	14	True	NA	NA	NA	33098387	33098564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_33098400_33098600
Isoform_74344_34	chr17	+	179	1	Intergenic	novelGene_4898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGAGTTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	33169511	33169690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_33169500_33169700
Isoform_74346_3	chr17	+	328	1	Intergenic	novelGene_4899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGCTGTCTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	33211017	33211345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_33211000_33211300
Isoform_74347_83	chr17	-	5449	1	Intergenic	novelGene_4669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	6848643	6843194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6843200_6848600
Isoform_7436_212	chr10	+	1859	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-10	14	-10	1	multi-exon	FALSE	canonical	3	48	junction_1	17.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80973776	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80973905_80979795_80981052_80983803
Isoform_74361_6	chr17	-	170	1	Intergenic	novelGene_4900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAAAGTACTAGCT	NA	False	NA	NA	False	NA	NA	NA	33621014	33620844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_33620800_33621000
Isoform_74362_9	chr17	+	179	1	Intergenic	novelGene_4901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATATATCACCTAC	NA	False	NA	NA	False	NA	NA	NA	33733779	33733958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_33733800_33734000
Isoform_74363_5	chr17	+	169	1	Intergenic	novelGene_4902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAAAAAAGAACATGAGC	NA	False	NA	NA	False	NA	NA	NA	33810035	33810204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_33810000_33810200
Isoform_74364_14	chr17	+	179	1	Intergenic	novelGene_4903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATGTATTATGA	5257	False	NA	NA	False	NA	NA	NA	33815779	33815958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_33815800_33816000
Isoform_7437_20	chr10	+	2177	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-328	14	-328	1	multi-exon	FALSE	canonical	3	48	junction_1	17.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80973458	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80973905_80979795_80981052_80983803
Isoform_74371_5	chr17	+	188	1	Intergenic	novelGene_4904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATCACTGATTACTCA	NA	False	NA	NA	False	NA	NA	NA	33875868	33876056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_33875900_33876100
Isoform_74373_3	chr17	+	956	1	Antisense	novelGene_ENSMUSG00000059208.16_AS_novelGene_ENSMUSG00000079557.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGCCTTTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	33903805	33904761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_33903800_33904800
Isoform_74377_176	chr17	+	179	1	ISM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	1688	12	1688	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATTTACCTCTCT	5165	False	NA	7	True	NA	NA	NA	33980653	33980832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_33980700_33980800
Isoform_74378_20	chr17	+	171	1	Intergenic	novelGene_4905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGTCAAGAATTTA	NA	False	NA	NA	False	NA	NA	NA	33991996	33992167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_33992000_33992200
Isoform_74380_8	chr17	-	178	1	Intergenic	novelGene_4906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCCAAAGTTCAAA	NA	False	NA	NA	False	NA	NA	NA	34014445	34014267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_34014300_34014400
Isoform_74381_431	chr17	-	176	1	Intergenic	novelGene_4907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAAGT	8769	False	NA	NA	False	NA	NA	NA	34019291	34019115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_34019100_34019300
Isoform_74387_3	chr17	+	180	1	Intergenic	novelGene_4908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTAAAAGCATAT	NA	False	NA	NA	False	NA	NA	NA	34074663	34074843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_34074700_34074800
Isoform_7439_35	chr10	+	2067	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-218	14	-218	1	multi-exon	FALSE	canonical	3	48	junction_1	17.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80973568	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80973905_80979795_80981052_80983803
Isoform_74390_3	chr17	-	327	1	Intergenic	novelGene_4909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9913	False	NA	NA	False	NA	NA	NA	34111103	34110776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_34110800_34111100
Isoform_74393_21	chr17	-	207	1	Intergenic	novelGene_4670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTAGTTTGGCCTGT	NA	False	NA	NA	False	AAAACA	-12	NA	6895892	6895685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6895700_6895900
Isoform_74397_3	chr17	-	1100	1	Antisense	novelGene_ENSMUSG00000024308.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAGAAAGATTGAAACA	NA	False	NA	NA	False	NA	NA	NA	34148383	34147283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_34147300_34148400
Isoform_74402_21	chr17	-	1573	1	FSM	ENSMUSG00000067370.5	ENSMUST00000087543.5	1580	1	8	-1	8	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCGTCTTCACCAGG	NA	False	NA	-1	True	AATAAA	-18	NA	34170454	34168881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_34168900_34170500
Isoform_74406_7	chr17	+	170	1	Intergenic	novelGene_4910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	34186205	34186375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_34186200_34186400
Isoform_74408_33	chr17	+	178	1	Intergenic	novelGene_4911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAAAAAAGGCCCT	632	False	NA	NA	False	NA	NA	NA	34212615	34212793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_34212600_34212800
Isoform_74409_8	chr17	+	171	1	Intergenic	novelGene_4912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAAAGTTTCAGGG	1130	False	NA	NA	False	NA	NA	NA	34213113	34213284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_34213100_34213300
Isoform_7441_36	chr10	+	3007	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-11	-1133	-11	1133	multi-exon	FALSE	canonical	3	48	junction_1	17.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGGTAGAATCCACTT	NA	False	NA	7	True	AATAAA	-16	NA	80973775	80985425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80973905_80979795_80981052_80983803
Isoform_74417_3	chr17	+	2877	1	Antisense	novelGene_ENSMUSG00000024335.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCAGTTGAGAGCCAC	2404	False	NA	NA	False	NA	NA	NA	34332462	34335339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_34332500_34335300
Isoform_74418_4	chr17	+	192	1	Intergenic	novelGene_4913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTATGCGTATGAATG	5590	False	NA	NA	False	NA	NA	NA	34382758	34382950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_34382800_34383000
Isoform_74423_3	chr17	-	875	1	Antisense	novelGene_ENSMUSG00000073421.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	34484168	34483293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_34483300_34484200
Isoform_74429_4	chr17	+	179	1	Intergenic	novelGene_4914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	5169	False	NA	NA	False	NA	NA	NA	35009880	35010059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35009900_35010100
Isoform_74430_12	chr17	-	171	1	Intergenic	novelGene_4671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGAAGTAAA	9284	False	NA	NA	False	NA	NA	NA	6951877	6951706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6951700_6951900
Isoform_74433_12	chr17	+	157	1	Intergenic	novelGene_4672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	6973021	6973178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_6973000_6973200
Isoform_74435_12	chr17	+	175	1	Intergenic	novelGene_4915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAAGCTTT	1663	False	NA	NA	False	NA	NA	NA	35143968	35144143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35144000_35144100
Isoform_74437_103	chr17	+	177	1	Intergenic	novelGene_4916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35157915	35158092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35157900_35158100
Isoform_74438_32	chr17	+	212	1	Intergenic	novelGene_4917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTTTTTTTTTTTTTT	9062	False	NA	NA	False	AAGAAA	-16	NA	35168133	35168345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35168100_35168300
Isoform_74439_14	chr17	-	2228	1	FSM	ENSMUSG00000093009.3	ENSMUST00000175268.3	66	1	-1451	-711	-1451	711	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6010	False	NA	NA	False	AATAAA	-16	NA	35171444	35169216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35169200_35171400
Isoform_7444_11	chr10	+	3207	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-211	-1133	-211	1133	multi-exon	FALSE	canonical	3	48	junction_1	17.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGGTAGAATCCACTT	NA	False	NA	7	True	AATAAA	-16	NA	80973575	80985425	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_80973905_80979795_80981052_80983803
Isoform_74445_19	chr17	-	2803	1	FSM	ENSMUSG00000090877.4	ENSMUST00000172753.2	2803	1	5	-5	5	5	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGTTTGTATGT	8776	False	NA	NA	False	AATAAA	-13	NA	35178209	35175406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35175400_35178200
Isoform_74446_15	chr17	-	2398	1	FSM	ENSMUSG00000091971.4	ENSMUST00000087328.4	2967	1	3	566	3	-566	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGCCCCGCTGATGTGA	9800	False	NA	NA	False	AATAAA	-25	NA	35191129	35188731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_35188700_35191100
Isoform_74448_17	chr17	-	168	1	Intergenic	novelGene_4918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCAGCTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	35208630	35208462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35208500_35208600
Isoform_74459_3	chr17	-	646	1	Intergenic	novelGene_4923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAGAAAAGAA	273	False	NA	NA	False	NA	NA	NA	35219330	35218684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35218700_35219300
Isoform_74462_5	chr17	-	2171	1	Intergenic	novelGene_4924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9179	False	NA	NA	False	NA	NA	NA	35227333	35225162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35225200_35227300
Isoform_74463_120	chr17	-	183	1	Intergenic	novelGene_4925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9482	False	NA	NA	False	NA	NA	NA	35254604	35254421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35254400_35254600
Isoform_74465_35	chr17	-	177	1	Intergenic	novelGene_4926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGGCATTTA	NA	False	NA	NA	False	NA	NA	NA	35305358	35305181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35305200_35305400
Isoform_74466_180	chr17	+	174	1	Intergenic	novelGene_4927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35335790	35335964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35335800_35336000
Isoform_74467_3	chr17	+	3331	1	Genic_Genomic	ENSMUSG00000092417.4	novel	NA	NA	NA	NA	2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4591	False	NA	15	True	AATAAA	-15	NA	35340460	35343791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_+_35340500_35343800
Isoform_74468_6	chr17	-	1030	1	Antisense	novelGene_ENSMUSG00000024392.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAAAGAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	35354443	35353413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_35353400_35354400
Isoform_74470_4	chr17	+	200	1	Intergenic	novelGene_4928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAATTTAAAAAACC	6252	False	NA	NA	False	NA	NA	NA	35400350	35400550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35400400_35400600
Isoform_74471_25	chr17	+	176	1	Intergenic	novelGene_4929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAGAGGGTTTAAGT	255	False	NA	NA	False	NA	NA	NA	35400938	35401114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35400900_35401100
Isoform_74472_40	chr17	-	192	1	Intergenic	novelGene_4930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	35411328	35411136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35411100_35411300
Isoform_74474_46	chr17	+	155	1	Intergenic	novelGene_4673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGAGGGAGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	7135757	7135912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_7135800_7135900
Isoform_74476_9	chr17	-	1058	1	Intergenic	novelGene_4931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35471707	35470649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35470600_35471700
Isoform_74479_3	chr17	+	551	1	FSM	ENSMUSG00000091655.4	ENSMUST00000174736.2	384	1	-50	-117	-50	117	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTTGTCTTAA	2660	False	NA	20	True	NA	NA	NA	35554834	35555385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_35554800_35555400
Isoform_74480_27	chr17	-	164	1	Intergenic	novelGene_4674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTAAAAAGCCTTGT	NA	False	NA	NA	False	NA	NA	NA	7146754	7146590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_7146600_7146800
Isoform_74481_18	chr6	-	177	1	Intergenic	novelGene_9439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	72940933	72940756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_72940800_72940900
Isoform_74484_8	chr17	-	205	1	Intergenic	novelGene_4933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGACCAGCTACAGTG	NA	False	NA	NA	False	NA	NA	NA	35656309	35656104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35656100_35656300
Isoform_74486_19	chr3	+	178	1	Intergenic	novelGene_7094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCTCTCT	7042	False	NA	NA	False	NA	NA	NA	88037920	88038098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_88037900_88038100
Isoform_74487_3	chr17	-	260	1	Intergenic	novelGene_4935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAACAAAAAA	8270	False	NA	NA	False	NA	NA	NA	35735849	35735589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35735600_35735800
Isoform_74489_3	chr17	-	431	1	Intergenic	novelGene_4932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	35656308	35655877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35655900_35656300
Isoform_74490_9	chr17	-	258	1	Intergenic	novelGene_4936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	35750239	35749981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35750000_35750200
Isoform_74492_3	chr17	+	181	1	Intergenic	novelGene_4937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACCACAGCC	NA	False	NA	NA	False	NA	NA	NA	35772783	35772964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35772800_35773000
Isoform_74493_3	chr17	-	343	1	Intergenic	novelGene_4938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	35798638	35798295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35798300_35798600
Isoform_74495_551	chr17	-	175	1	Intergenic	novelGene_4939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	551	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35800527	35800352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35800400_35800500
Isoform_74498_20	chr17	-	177	1	Intergenic	novelGene_4940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACC	NA	False	NA	NA	False	NA	NA	NA	35807370	35807193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35807200_35807400
Isoform_74499_7	chr17	-	161	1	Intergenic	novelGene_4941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCTGAGCAAGCCAATA	NA	False	NA	NA	False	NA	NA	NA	35807728	35807567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35807600_35807700
Isoform_74503_12	chr1	+	378	1	Intergenic	novelGene_526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAAAACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	159121378	159121756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_159121400_159121800
Isoform_74506_12	chr17	+	226	1	Intergenic	novelGene_4942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTATTTTATGTATTT	1193	False	NA	NA	False	NA	NA	NA	35822877	35823103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35822900_35823100
Isoform_74507_5	chr17	-	163	1	Intergenic	novelGene_4943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTAAAGGAGCTGCT	NA	False	NA	NA	False	NA	NA	NA	35823261	35823098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35823100_35823300
Isoform_74510_25	chr17	+	184	1	Intergenic	novelGene_4944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATCTAATTAGTATTTT	4464	False	NA	15	True	NA	NA	NA	35846349	35846533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35846300_35846500
Isoform_74511_13	chr17	+	1875	2	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	2893	-264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTGCCTTCTTGGGGTC	102	False	NA	7	True	AATAAA	-21	NA	35865917	35867813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_35865959_35865979
Isoform_74512_32	chr17	+	180	1	Intergenic	novelGene_4945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATCACAGCTAGGCA	3045	False	NA	NA	False	NA	NA	NA	35891177	35891357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35891200_35891400
Isoform_74516_44	chr17	-	169	1	Intergenic	novelGene_4946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAAAAACCATTAACT	NA	False	NA	NA	False	NA	NA	NA	35940633	35940464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_35940500_35940600
Isoform_74517_10	chr17	+	177	1	Intergenic	novelGene_4947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAATATGGTCGA	NA	False	NA	NA	False	NA	NA	NA	35959629	35959806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35959600_35959800
Isoform_74519_3	chr17	+	177	1	Intergenic	novelGene_4948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	7115	False	NA	NA	False	NA	NA	NA	35987979	35988156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_35988000_35988200
Isoform_74520_17	chr17	+	206	1	Intergenic	novelGene_4949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGGGGGGGGGCAGCT	NA	False	NA	NA	False	CATAAA	-11	NA	36016346	36016552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_36016300_36016600
Isoform_74521_11	chr17	-	185	1	Intergenic	novelGene_4950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCAAACATACAAAAGCC	7342	False	NA	NA	False	NA	NA	NA	36025370	36025185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36025200_36025400
Isoform_74525_6	chr17	-	166	1	ISM	ENSMUSG00000092600.2	ENSMUST00000174630.2	492	2	20692	11	20692	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACCCAATGTATTCTC	4063	False	NA	NA	False	NA	NA	NA	36054391	36054225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_36054200_36054400
Isoform_74526_3	chr17	-	175	1	Intergenic	novelGene_4951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGGTGTGAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	36092311	36092136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36092100_36092300
Isoform_74527_3	chr17	-	177	1	Intergenic	novelGene_4952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	36096586	36096409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36096400_36096600
Isoform_74529_4	chr1	+	176	1	Intergenic	novelGene_624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAAATATCCTAT	NA	False	NA	NA	False	NA	NA	NA	179528645	179528821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_179528600_179528800
Isoform_74568_3	chr17	-	830	1	Intergenic	novelGene_4953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTCTTTGTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	36152239	36151409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36151400_36152200
Isoform_74569_6	chr17	+	857	1	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-1	-3500	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAACA	9389	False	NA	NA	False	NA	NA	NA	36152566	36153423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_36152600_36153400
Isoform_74579_17	chr17	-	176	1	Intergenic	novelGene_4955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	2171	False	NA	NA	False	NA	NA	NA	36188070	36187894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36187900_36188100
Isoform_7458_21399	chr10	+	3073	14	FSM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	15	1	15	-1	multi-exon	TRUE	canonical	3	5618	junction_10	706.418033369635	21399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
Isoform_74580_126	chr17	-	152	1	Intergenic	novelGene_4956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAACCCACTAAGAATA	NA	False	NA	NA	False	NA	NA	NA	36195308	36195156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36195200_36195300
Isoform_74581_22	chr17	-	176	1	Intergenic	novelGene_4957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36205458	36205282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36205300_36205500
Isoform_74583_3	chr17	+	173	1	Intergenic	novelGene_4675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATACAT	NA	False	NA	NA	False	NA	NA	NA	7315497	7315670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_7315500_7315700
Isoform_74585_6	chr17	-	3308	1	Intergenic	novelGene_4958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAACAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36233466	36230158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36230200_36233500
Isoform_74590_24	chr17	+	174	1	Intergenic	novelGene_4959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATGAACTTA	NA	False	NA	NA	False	NA	NA	NA	36266213	36266387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_36266200_36266400
Isoform_74592_4	chr17	+	194	1	Intergenic	novelGene_4676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCAATATGAGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	7403445	7403639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_7403400_7403600
Isoform_74598_17	chr17	+	177	1	Intergenic	novelGene_4960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	36347650	36347827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_36347600_36347800
Isoform_74599_11	chr17	-	188	1	Intergenic	novelGene_4961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATGCATCT	NA	False	NA	NA	False	NA	NA	NA	36397044	36396856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36396900_36397000
Isoform_74600_7	chr17	-	168	1	Intergenic	novelGene_4962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATCTCAATCTTAT	NA	False	NA	NA	False	NA	NA	NA	36399079	36398911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_36398900_36399100
Isoform_74601_90	chr17	+	171	1	Antisense	novelGene_ENSMUSG00000073403.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACAG	NA	False	NA	NA	False	NA	NA	NA	36453686	36453857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_36453700_36453900
Isoform_74606_15	chr17	+	176	1	Intergenic	novelGene_4963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGGGAGAAGATAAAACTT	NA	False	NA	NA	False	NA	NA	NA	36547858	36548034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_36547900_36548000
Isoform_74608_12	chr17	-	189	1	Antisense	novelGene_ENSMUSG00000092392.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAACAGCTAC	NA	False	NA	NA	False	NA	NA	NA	36564077	36563888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_36563900_36564100
Isoform_74612_22	chr17	+	688	1	NIC	ENSMUSG00000024457.17	novel	522	2	NA	NA	-11	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCACCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37148053	37148741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_37148100_37148700
Isoform_74614_42	chr17	-	170	1	Intergenic	novelGene_4964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAATGAGACTTAT	NA	False	NA	NA	False	NA	NA	NA	37213465	37213295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_37213300_37213500
Isoform_74615_6	chr17	-	171	1	Intergenic	novelGene_4965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAAATAATAATAAAG	NA	False	NA	NA	False	NA	NA	NA	37222598	37222427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_37222400_37222600
Isoform_74617_167	chr17	+	185	1	Intergenic	novelGene_4966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGATGCTTAGG	NA	False	NA	NA	False	NA	NA	NA	37246097	37246282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_37246100_37246300
Isoform_74620_7	chr17	-	281	1	ISM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	7	5189	7	-1753	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37300422	37300141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_37300100_37300400
Isoform_74625_3	chr17	-	6256	1	Antisense	novelGene_ENSMUSG00000036036.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCAAACAGTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	37320811	37314555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_37314600_37320800
Isoform_74626_3	chr17	-	6536	1	Antisense	novelGene_ENSMUSG00000036036.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCAAACAGTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	37321091	37314555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_37314600_37321100
Isoform_74637_43	chr17	-	161	1	Intergenic	novelGene_4967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	37346105	37345944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_37345900_37346100
Isoform_74640_6	chr17	+	828	1	ISM	ENSMUSG00000024462.18	ENSMUST00000025338.16	5248	23	27511	763	3033	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTGTCCTGTGAACTG	NA	False	NA	40	True	AATAAA	-28	NA	37384368	37385196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_37384400_37385200
Isoform_74650_15	chr17	-	176	1	Intergenic	novelGene_4968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	37400600	37400424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_37400400_37400600
Isoform_74651_67	chr17	-	194	1	Intergenic	novelGene_4969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATAAATAAATCT	9860	False	NA	NA	False	NA	NA	NA	37473388	37473194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_37473200_37473400
Isoform_74654_3	chr17	+	169	1	Intergenic	novelGene_4970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	38262266	38262435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_38262300_38262400
Isoform_74655_8	chr17	+	905	1	Intergenic	novelGene_4971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	38306756	38307661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_38306800_38307700
Isoform_74656_11	chr17	-	4072	1	Intergenic	novelGene_4972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCTGCACAGAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	38313571	38309499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_38309500_38313600
Isoform_74660_4	chr17	+	168	1	Intergenic	novelGene_4973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	40034871	40035039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_40034900_40035000
Isoform_74672_319	chr17	+	4168	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3353	1034	-3353	-1034	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAGAGTGTTCAAAG	NA	False	NA	-47	True	NA	NA	NA	40153890	40158058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_40153900_40158100
Isoform_74701_8	chr17	-	4435	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGGTACCTTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	40158325	40153890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_40153900_40158300
Isoform_74818_3277	chr17	+	814	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1	1034	1	-1034	mono-exon	FALSE	NA	NA	NA	NA	NA	3277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAGAGTGTTCAAAG	NA	False	NA	-47	True	NA	NA	NA	40157244	40158058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_40157200_40158100
Isoform_74821_994	chr17	+	1187	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1	661	1	-661	mono-exon	FALSE	NA	NA	NA	NA	NA	994	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTGAAACTTAAAGGAAT	NA	False	NA	31	True	NA	NA	NA	40157244	40158431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_40157200_40158400
Isoform_74823_1274	chr17	+	1033	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1	815	1	-815	mono-exon	FALSE	NA	NA	NA	NA	NA	1274	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACGAAAGTCGGAGTTTC	NA	False	NA	39	True	NA	NA	NA	40157244	40158277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_40157200_40158300
Isoform_74887_3	chr17	-	480	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGCCCTTCCGTCAA	NA	False	NA	NA	False	NA	NA	NA	40158950	40158470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_40158500_40159000
Isoform_74891_4	chr17	+	474	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1328	47	1328	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCGTAACAAGGTTTCC	NA	False	NA	11	True	NA	NA	NA	40158571	40159045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_40158600_40159000
Isoform_74895_3	chr17	-	242	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTGTCCCTCTAAGAA	NA	False	NA	NA	False	NA	NA	NA	40158952	40158710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_40158700_40159000
Isoform_74896_4	chr17	+	309	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1493	47	1493	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCGTAACAAGGTTTCC	NA	False	NA	11	True	NA	NA	NA	40158736	40159045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_40158700_40159000
Isoform_74907_37	chr9	-	178	1	Intergenic	novelGene_11235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	44850212	44850034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_44850000_44850200
Isoform_74910_3	chr17	+	3708	1	Intergenic	novelGene_4975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	40491132	40494840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_40491100_40494800
Isoform_74912_7	chr17	+	174	1	Intergenic	novelGene_4976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATGCTAAAATTACA	NA	False	NA	NA	False	NA	NA	NA	40758622	40758796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_40758600_40758800
Isoform_74915_14	chr17	+	175	1	Intergenic	novelGene_4677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTATCCTAAG	NA	False	NA	NA	False	NA	NA	NA	7712826	7713001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_7712800_7713000
Isoform_74923_46	chr17	+	2778	1	Intergenic	novelGene_4978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43175257	43178035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_43175300_43178000
Isoform_74924_4	chr17	+	176	1	Intergenic	novelGene_4979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGTCTCTAGTA	NA	False	NA	NA	False	NA	NA	NA	43183657	43183833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_43183700_43183800
Isoform_74926_17	chr17	-	178	1	Intergenic	novelGene_4980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	43248503	43248325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_43248300_43248500
Isoform_74927_7	chr17	-	176	1	Intergenic	novelGene_4981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAATAATAAATT	NA	False	NA	NA	False	NA	NA	NA	43264283	43264107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_43264100_43264300
Isoform_74930_3	chr17	-	3941	1	NIC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	21288	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGAAAAAAAAATGGCTCA	NA	False	NA	NA	False	AGTAAA	-35	NA	43956735	43952794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_43952800_43956700
Isoform_74931_5	chr17	-	344	1	Antisense	novelGene_ENSMUSG00000023963.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGATTTGAACTGGGCT	NA	False	NA	NA	False	NA	NA	NA	43978593	43978249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_43978200_43978600
Isoform_74933_16	chr17	-	226	1	Intergenic	novelGene_4982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTTGTTTTGGTT	NA	False	NA	NA	False	AAGAAA	-30	NA	45065571	45065345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_45065300_45065600
Isoform_74934_10	chr17	-	1691	2	Antisense	novelGene_ENSMUSG00000038954.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAGTTCATC	NA	False	NA	NA	False	TTTAAA	-6	NA	45092573	45090858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_45091476_45091499
Isoform_74935_4	chr17	-	157	1	Intergenic	novelGene_4983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTTTAAAATGAGTT	2274	False	NA	NA	False	NA	NA	NA	45486409	45486252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_45486300_45486400
Isoform_74936_5	chr17	+	176	1	Intergenic	novelGene_4984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTAAGGTGGAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	45536749	45536925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_45536700_45536900
Isoform_74937_17	chr17	+	183	1	Intergenic	novelGene_4985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATTTTATG	1609	False	NA	NA	False	NA	NA	NA	45697036	45697219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_45697000_45697200
Isoform_74938_3	chr17	+	174	1	Intergenic	novelGene_4986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTTTTAAAAAAGGT	9813	False	NA	NA	False	NA	NA	NA	45709397	45709571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_45709400_45709600
Isoform_74941_6	chr17	+	176	1	Intergenic	novelGene_4987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTTAGCACGTGC	NA	False	NA	NA	False	NA	NA	NA	45832713	45832889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_45832700_45832900
Isoform_74953_3	chr17	-	993	1	NIC	ENSMUSG00000079471.5	novel	804	2	NA	NA	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGGTGGTGGTGGCTTT	NA	False	NA	-8	True	AATAAA	-17	NA	45912892	45911899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45911900_45912900
Isoform_74954_9	chr17	+	179	1	Intergenic	novelGene_4989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	45915526	45915705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_45915500_45915700
Isoform_74956_7	chr17	-	317	1	Intergenic	novelGene_4990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATTCTGGA	NA	False	NA	NA	False	NA	NA	NA	45925601	45925284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_45925300_45925600
Isoform_74957_42	chr17	+	177	1	Intergenic	novelGene_4991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45948209	45948386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_45948200_45948400
Isoform_74959_35	chr17	-	178	1	Intergenic	novelGene_4992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	45988595	45988417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_45988400_45988600
Isoform_74960_6	chr17	-	2789	1	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-25	2850	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	45997088	45994299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_45994300_45997100
Isoform_74963_30	chr17	-	158	1	Intergenic	novelGene_4993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGCCTGAGTGAGCG	8268	False	NA	NA	False	NA	NA	NA	46024106	46023948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_46023900_46024100
Isoform_74966_7	chr17	+	285	1	Intergenic	novelGene_4994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	46074725	46075010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_46074700_46075000
Isoform_74967_9	chr17	+	230	1	Intergenic	novelGene_4995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAATTGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	46092993	46093223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_46093000_46093200
Isoform_74968_10	chr17	-	326	1	Intergenic	novelGene_4996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACTTTTGAAAAA	8685	False	NA	NA	False	NA	NA	NA	46144845	46144519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_46144500_46144800
Isoform_74970_6	chr17	-	284	1	Intergenic	novelGene_4997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	46291392	46291108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_46291100_46291400
Isoform_74974_5	chr17	+	172	1	Intergenic	novelGene_4678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATATCACAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	8329864	8330036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_8329900_8330000
Isoform_74975_4	chr17	+	1540	1	Antisense	novelGene_ENSMUSG00000023951.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGAGGTTTGAATATCA	NA	False	NA	NA	False	AATAAA	-36	NA	46341595	46343135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_46341600_46343100
Isoform_74977_4	chr17	+	174	1	Intergenic	novelGene_4998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGTATTTTTTAA	6730	False	NA	NA	False	NA	NA	NA	46417621	46417795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_46417600_46417800
Isoform_74978_8	chr17	+	266	1	Intergenic	novelGene_4999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46421360	46421626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_46421400_46421600
Isoform_74979_12	chr17	+	1182	1	NIC	ENSMUSG00000023967.10	novel	884	6	NA	NA	13	-10937	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGCAGATAGATAAACT	NA	False	NA	NA	False	NA	NA	NA	46421934	46423116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_46421900_46423100
Isoform_74980_64	chr17	+	170	1	Intergenic	novelGene_5000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATAGAAAATTT	NA	False	NA	NA	False	NA	NA	NA	46466177	46466347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_46466200_46466300
Isoform_74981_5	chr17	+	1080	1	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	-1	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAAAAATAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	46471973	46473053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_46472000_46473100
Isoform_74982_10	chr17	+	1018	1	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	1	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	46472037	46473055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_46472000_46473100
Isoform_74983_8	chr17	+	214	1	Antisense	novelGene_ENSMUSG00000023953.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATTCCAGATGTATTAC	NA	False	NA	NA	False	AAAAAG	-17	NA	46485870	46486084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_46485900_46486100
Isoform_74984_182	chr17	-	182	1	Intergenic	novelGene_5001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAATCAG	NA	False	NA	NA	False	NA	NA	NA	46496280	46496098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_46496100_46496300
Isoform_74987_4	chr17	+	298	2	NNC	ENSMUSG00000067150.7	novel	3145	13	NA	NA	12896	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGGGCCCTATTTTCCT	NA	False	NA	12	True	AGTAAA	-14	NA	46553690	46554522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_+_46553701_46554234
Isoform_74989_14	chr17	-	2133	1	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-28	-602	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46558922	46556789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46556800_46558900
Isoform_74990_4	chr17	-	2473	1	Antisense	novelGene_ENSMUSG00000069135.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAAGATTATAAGTCAGT	NA	False	NA	NA	False	AAAACA	-39	NA	8387209	8384736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_8384700_8387200
Isoform_74992_14	chr17	+	178	1	Intergenic	novelGene_5002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACTCTTGAAGGG	NA	False	NA	NA	False	NA	NA	NA	46611041	46611219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_46611000_46611200
Isoform_74993_3	chr17	-	517	1	NIC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	1	-2923	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7139	False	NA	NA	False	GATAAA	-10	NA	46638922	46638405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_46638400_46638900
Isoform_74994_4	chr17	-	226	1	Intergenic	novelGene_5003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCTAGGAAAGCTATAAC	NA	False	NA	NA	False	NA	NA	NA	46683315	46683089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_46683100_46683300
Isoform_74995_20	chr17	+	174	1	ISM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	32569	3551	6671	-3551	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGATTTTAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	46727225	46727399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_+_46727200_46727400
Isoform_74996_9	chr17	-	176	1	Intergenic	novelGene_5004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	46739199	46739023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_46739000_46739200
Isoform_74997_8	chr17	-	177	1	Intergenic	novelGene_5005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	2036	False	NA	NA	False	NA	NA	NA	46750164	46749987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_46750000_46750200
Isoform_74998_23	chr17	+	170	1	Intergenic	novelGene_5006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	46846813	46846983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_46846800_46847000
Isoform_74999_64	chr17	-	177	1	Intergenic	novelGene_5007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	46847457	46847280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_46847300_46847500
Isoform_75006_9	chr17	+	191	1	Intergenic	novelGene_5009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAATTAAAATG	NA	False	NA	NA	False	NA	NA	NA	47003746	47003937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47003700_47003900
Isoform_75009_4	chr17	+	1409	1	NIC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	11	-4561	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTGAAGTGTTTGATT	NA	False	NA	NA	False	ATTAAA	-14	NA	47022412	47023821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_47022400_47023800
Isoform_75010_3	chr17	+	228	1	Intergenic	novelGene_5010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAAAG	-29	NA	47051820	47052048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47051800_47052000
Isoform_75011_7	chr17	+	152	1	Intergenic	novelGene_5011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAACCCTCATCCTGCC	NA	False	NA	NA	False	NA	NA	NA	47053302	47053454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47053300_47053500
Isoform_75014_45	chr17	-	176	1	ISM	ENSMUSG00000036858.9	ENSMUST00000041012.9	1283	4	7846	28	7846	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	47066792	47066616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_47066600_47066800
Isoform_75015_128	chr17	+	582	1	FSM	ENSMUSG00000062619.7	ENSMUST00000071430.7	762	1	180	0	180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAACTTGGCAGTCGTT	NA	False	NA	10	True	GATAAA	-18	NA	47083740	47084322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47083700_47084300
Isoform_75018_19	chr17	+	963	1	Antisense	novelGene_ENSMUSG00000063888.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47090184	47091147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_47090200_47091100
Isoform_75019_8	chr17	+	171	1	Intergenic	novelGene_4680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTAGGCCCCCTGTTC	3077	False	NA	NA	False	NA	NA	NA	8509421	8509592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_8509400_8509600
Isoform_75022_11	chr17	+	244	2	Intergenic	novelGene_5012	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	47094669	47094938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47094836_47094860
Isoform_75023_11	chr11	+	184	1	Intergenic	novelGene_2328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6780	False	NA	NA	False	NA	NA	NA	117839072	117839256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_117839100_117839300
Isoform_75029_10	chr4	+	188	1	Intergenic	novelGene_8016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	133535970	133536158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_133536000_133536200
Isoform_75030_3	chr17	-	177	1	Intergenic	novelGene_5014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	47139785	47139608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_47139600_47139800
Isoform_75032_9	chr17	-	171	1	Intergenic	novelGene_5015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGGGGGGGGTG	NA	False	NA	NA	False	NA	NA	NA	47163558	47163387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_47163400_47163600
Isoform_75033_5	chr17	-	1184	1	Intergenic	novelGene_5016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	47201324	47200140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_47200100_47201300
Isoform_75034_69	chr17	+	1210	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-47	1	-47	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTGGTTTGGCCTTC	5260	False	NA	20	True	ATTAAA	-20	NA	47201562	47202772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47201600_47202800
Isoform_75035_8	chr17	+	1356	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-38	-154	-38	154	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCATTAGCGGACGGTT	5269	False	NA	18	True	AATAAA	-19	NA	47201571	47202927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47201600_47202900
Isoform_75036_188	chr17	+	1180	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-16	0	-16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTGGTTTGGCCTTCC	5291	False	NA	21	True	ATTAAA	-21	NA	47201593	47202773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47201600_47202800
Isoform_75037_40	chr17	+	1333	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-15	-154	-15	154	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCATTAGCGGACGGTT	5292	False	NA	18	True	AATAAA	-19	NA	47201594	47202927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47201600_47202900
Isoform_75039_4	chr17	+	2758	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-13	-1581	-13	1581	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAGAATAAA	5294	False	NA	NA	False	NA	NA	NA	47201596	47204354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_47201600_47204400
Isoform_75041_21	chr17	-	176	1	Intergenic	novelGene_5017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47315138	47314962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_47315000_47315100
Isoform_75042_10	chr17	-	2508	1	NIC	ENSMUSG00000023977.16	novel	5691	47	NA	NA	-2	-51390	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47321448	47318940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_47318900_47321400
Isoform_75043_73	chr17	+	177	1	Intergenic	novelGene_5018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTGATTCCTGTTG	2872	False	NA	NA	False	NA	NA	NA	47328487	47328664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47328500_47328700
Isoform_75044_5	chr17	-	301	1	Intergenic	novelGene_5019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTGACAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47344394	47344093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_47344100_47344400
Isoform_75045_7	chr17	+	178	1	Intergenic	novelGene_5020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTCCCC	2223	False	NA	NA	False	NA	NA	NA	47438960	47439138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47439000_47439100
Isoform_75047_3	chr17	-	534	1	Intergenic	novelGene_5021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATCCTTCACGGAGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	47537497	47536963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_47537000_47537500
Isoform_75048_10	chr17	+	172	1	Intergenic	novelGene_5022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	6668	False	NA	NA	False	NA	NA	NA	47637189	47637361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47637200_47637400
Isoform_75050_90	chr17	+	178	1	Intergenic	novelGene_4681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8547032	8547210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_8547000_8547200
Isoform_75051_12	chr17	+	171	1	Intergenic	novelGene_5023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	47785693	47785864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47785700_47785900
Isoform_75052_30	chr17	+	165	1	Intergenic	novelGene_5024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAATTCTT	8389	False	NA	NA	False	NA	NA	NA	47794123	47794288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47794100_47794300
Isoform_75055_12	chr17	+	162	1	Intergenic	novelGene_5025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAATAAATAATATATA	NA	False	NA	NA	False	NA	NA	NA	47806644	47806806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47806600_47806800
Isoform_75059_58	chr17	+	184	1	Intergenic	novelGene_5026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCTGGCGCCCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	47813976	47814160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47814000_47814200
Isoform_75060_3	chr17	+	330	1	Intergenic	novelGene_5027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	47821074	47821404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47821100_47821400
Isoform_75062_18	chr17	+	173	1	Intergenic	novelGene_5028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47881326	47881499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47881300_47881500
Isoform_75074_8	chr17	+	174	1	Intergenic	novelGene_5029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	47913910	47914084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_47913900_47914100
Isoform_75075_3	chr17	-	3170	1	Antisense	novelGene_ENSMUSG00000092558.4_AS_novelGene_ENSMUSG00000023984.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAGAAAAA	7004	False	NA	NA	False	NA	NA	NA	47931247	47928077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_47928100_47931200
Isoform_75076_17	chr17	-	179	1	Intergenic	novelGene_5030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47947205	47947026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_47947000_47947200
Isoform_75077_159	chr17	-	185	1	Intergenic	novelGene_5031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-6	NA	47974098	47973913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_47973900_47974100
Isoform_75083_3	chr17	-	177	1	Intergenic	novelGene_5032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	48056465	48056288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_48056300_48056500
Isoform_75084_9	chr17	-	176	1	Intergenic	novelGene_5033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGCCAGA	NA	False	NA	NA	False	NA	NA	NA	48057774	48057598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_48057600_48057800
Isoform_75087_202	chr17	-	176	1	Intergenic	novelGene_5034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATCTTTTTTTAAAAAC	NA	False	NA	-11	True	NA	NA	NA	48115911	48115735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_48115700_48115900
Isoform_75088_5	chr17	-	165	1	Intergenic	novelGene_5035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATACATTTTAAAACCAT	9018	False	NA	NA	False	NA	NA	NA	48137290	48137125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_48137100_48137300
Isoform_75090_34	chr17	+	179	1	Intergenic	novelGene_5036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCAC	NA	False	NA	NA	False	NA	NA	NA	48222902	48223081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_48222900_48223100
Isoform_75092_59	chr17	+	220	1	Intergenic	novelGene_5038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	326	False	NA	NA	False	NA	NA	NA	48248176	48248396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_48248200_48248400
Isoform_75094_37	chr17	+	165	1	Intergenic	novelGene_5039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	48652054	48652219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_48652100_48652200
Isoform_75096_6	chr17	-	2713	1	NIC	ENSMUSG00000023994.14	novel	3653	10	NA	NA	-5	-9096	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACTTTAAAATC	NA	False	NA	NA	False	AATACA	-19	NA	48716763	48714050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_48714000_48716800
Isoform_75101_5	chr17	+	3244	1	NIC	ENSMUSG00000064120.15	novel	729	4	NA	NA	1	-3924	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAAGCCAAATGAGTC	NA	False	NA	NA	False	NA	NA	NA	49735392	49738636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_49735400_49738600
Isoform_75111_267	chr17	+	1311	1	FSM	ENSMUSG00000044645.9	ENSMUST00000061681.9	756	1	-117	-438	-117	438	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAATAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	51005598	51006909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_51005600_51006900
Isoform_75116_8	chr17	-	176	1	Intergenic	novelGene_5041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAATTTAAATC	NA	False	NA	NA	False	NA	NA	NA	51386019	51385843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_51385800_51386000
Isoform_75120_15	chr17	-	168	1	Intergenic	novelGene_4682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTAATTAATGAT	NA	False	NA	NA	False	NA	NA	NA	8857905	8857737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_8857700_8857900
Isoform_75122_11	chr17	+	175	1	Intergenic	novelGene_5042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACTATATTCATT	NA	False	NA	NA	False	NA	NA	NA	53781718	53781893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_53781700_53781900
Isoform_75128_25	chr17	+	182	1	Intergenic	novelGene_5043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACACT	NA	False	NA	NA	False	NA	NA	NA	53818532	53818714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_53818500_53818700
Isoform_75129_3	chr17	+	166	1	Intergenic	novelGene_5044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	53826480	53826646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_53826500_53826600
Isoform_75131_9	chr2	-	173	1	Intergenic	novelGene_6226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACTA	NA	False	NA	NA	False	NA	NA	NA	52872256	52872083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_52872100_52872300
Isoform_75132_217	chr17	-	177	1	Intergenic	novelGene_5045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	53869715	53869538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_53869500_53869700
Isoform_75135_8	chr17	-	152	1	Intergenic	novelGene_5046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTACTATACACATGCTA	NA	False	NA	NA	False	NA	NA	NA	53967529	53967377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_53967400_53967500
Isoform_75143_4	chr17	+	170	1	Intergenic	novelGene_5047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAAGGACCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	54011509	54011679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_54011500_54011700
Isoform_75144_3	chr17	+	182	1	Intergenic	novelGene_5048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGGACCTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	54051891	54052073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_54051900_54052100
Isoform_75145_3	chr17	+	848	1	Intergenic	novelGene_5049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGGGAAGTAGACACA	NA	False	NA	NA	False	NA	NA	NA	54111213	54112061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_54111200_54112100
Isoform_75148_61	chr17	-	200	1	Intergenic	novelGene_5050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAATCCATGTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	54833865	54833665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_54833700_54833900
Isoform_75149_22	chr17	+	168	1	Intergenic	novelGene_5052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	56002405	56002573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_56002400_56002600
Isoform_75151_6	chr17	-	609	1	NIC	ENSMUSG00000097077.2	novel	1960	3	NA	NA	14	-3988	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAGTTTCTTTATTTC	4889	False	NA	NA	False	NA	NA	NA	56266367	56265758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56265800_56266400
Isoform_75158_14	chr17	-	165	1	Intergenic	novelGene_5054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATCTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56345136	56344971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56345000_56345100
Isoform_75161_4	chr17	-	355	1	Intergenic	novelGene_5055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56398983	56398628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56398600_56399000
Isoform_75164_32	chr17	-	169	1	Intergenic	novelGene_5056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATCA	NA	False	NA	NA	False	NA	NA	NA	56401983	56401814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56401800_56402000
Isoform_75165_6	chr17	-	215	1	Intergenic	novelGene_5057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	56402530	56402315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56402300_56402500
Isoform_75166_148	chr17	-	178	1	Antisense	novelGene_ENSMUSG00000002833.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGAACCCTC	6305	False	NA	NA	False	NA	NA	NA	56406795	56406617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_56406600_56406800
Isoform_75167_5	chr17	+	5849	1	Antisense	novelGene_ENSMUSG00000117341.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGTATCATCAGTCAG	NA	False	NA	NA	False	NA	NA	NA	9929722	9935571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_9929700_9935600
Isoform_75168_6	chr17	-	173	1	Intergenic	novelGene_5058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTAAAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	56526715	56526542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56526500_56526700
Isoform_75169_3	chr17	-	213	1	Intergenic	novelGene_5059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGAGTGAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	56539977	56539764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56539800_56540000
Isoform_75171_126	chr17	+	3304	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	11	3486	11	-3486	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTAGCTGTTATTT	NA	False	NA	8	True	ATTAAA	-18	NA	56563820	56567124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56563800_56567100
Isoform_75173_5	chr17	+	4266	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	0	2535	0	-2535	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAAAGATTAGTG	NA	False	NA	NA	False	NA	NA	NA	56563809	56568075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_56563800_56568100
Isoform_75175_4	chr17	-	362	1	Intergenic	novelGene_5060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAAACAAATAAACAA	521	False	NA	NA	False	NA	NA	NA	56570985	56570623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56570600_56571000
Isoform_75178_3	chr17	-	259	1	Intergenic	novelGene_5061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCATTACTTTGGGGC	NA	False	NA	50	True	NA	NA	NA	56571705	56571446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56571400_56571700
Isoform_75179_249	chr17	-	205	1	Intergenic	novelGene_5062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCCCTCCTCCCCCAA	NA	False	NA	-5	True	NA	NA	NA	56571706	56571501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_56571500_56571700
Isoform_75180_4	chr17	+	189	1	Intergenic	novelGene_5063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAACCCAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	56575672	56575861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_56575700_56575900
Isoform_75189_12	chr17	-	3620	1	Antisense	novelGene_ENSMUSG00000001228.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAGAGCAA	2541	False	NA	NA	False	NA	NA	NA	56624341	56620721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_56620700_56624300
Isoform_75203_3	chr17	-	3177	1	NIC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	5	-15593	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATAGCGCCTTG	NA	False	NA	NA	False	NA	NA	NA	56783384	56780207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_56780200_56783400
Isoform_75204_3	chr17	+	167	1	Intergenic	novelGene_5065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGTCAATTGAAAGA	2528	False	NA	NA	False	NA	NA	NA	56796438	56796605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_56796400_56796600
Isoform_7521_1024	chr10	+	1472	9	FSM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	60	198	-4	16	multi-exon	FALSE	canonical	3	321	junction_1	26.7675176286483	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCCTGTCTCCCACGC	8615	False	NA	11	True	AATAAA	-16	NA	81018898	81028833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
Isoform_75229_125	chr17	+	176	1	Intergenic	novelGene_5066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	56944015	56944191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_56944000_56944200
Isoform_75230_3	chr17	+	257	1	Intergenic	novelGene_5067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAAAATAATAATATTT	NA	False	NA	NA	False	NA	NA	NA	56949799	56950056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_56949800_56950100
Isoform_75231_61	chr6	-	177	1	Intergenic	novelGene_9544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114842225	114842048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_114842000_114842200
Isoform_75242_28	chr17	+	1907	1	Antisense	novelGene_ENSMUSG00000062078.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10433800	10435707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_10433800_10435700
Isoform_75243_21	chr17	+	173	1	Intergenic	novelGene_5068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACCTGGATG	NA	False	NA	NA	False	NA	NA	NA	57048796	57048969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_57048800_57049000
Isoform_75244_9	chr17	-	188	1	Intergenic	novelGene_5069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGTAATAATGTA	NA	False	NA	NA	False	NA	NA	NA	57049496	57049308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_57049300_57049500
Isoform_75245_7	chr17	-	175	1	Intergenic	novelGene_5070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGGAGGC	8200	False	NA	NA	False	NA	NA	NA	57073516	57073341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_57073300_57073500
Isoform_75246_9	chr17	-	176	1	Intergenic	novelGene_5071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGCTAA	2315	False	NA	NA	False	NA	NA	NA	57085416	57085240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_57085200_57085400
Isoform_75247_3	chr17	+	1861	1	Intergenic	novelGene_5072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	57097062	57098923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_57097100_57098900
Isoform_75248_6	chr17	+	1959	1	Intergenic	novelGene_4683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAAAACA	NA	False	NA	NA	False	AAGAAA	-36	NA	10482467	10484426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_10482500_10484400
Isoform_75249_3	chr17	+	783	1	Genic_Genomic	ENSMUSG00000024209.10	novel	NA	NA	NA	NA	12620	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCGCACCCCGAGGTA	NA	False	NA	17	True	ATTAAA	-17	NA	57195122	57195905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_+_57195100_57195900
Isoform_75250_11	chr17	+	4117	1	Intergenic	novelGene_5073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57215869	57219986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_57215900_57220000
Isoform_75251_20	chr17	+	177	1	Intergenic	novelGene_5074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTACT	8414	False	NA	NA	False	NA	NA	NA	57293777	57293954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_57293800_57294000
Isoform_75254_5	chr17	+	1605	1	NIC	ENSMUSG00000109739.2	novel	1179	6	NA	NA	12	-8028	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	1855	False	NA	NA	False	NA	NA	NA	57318480	57320085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_57318500_57320100
Isoform_75255_31	chr17	-	172	1	Intergenic	novelGene_5075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	57325078	57324906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_57324900_57325100
Isoform_75272_3	chr17	+	174	1	Intergenic	novelGene_4684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTACTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	10526377	10526551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_10526400_10526600
Isoform_75273_17	chr17	-	176	1	Intergenic	novelGene_5077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCACACG	NA	False	NA	NA	False	NA	NA	NA	57427323	57427147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_57427100_57427300
Isoform_75274_161	chr17	+	185	1	Intergenic	novelGene_5078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGGACC	NA	False	NA	NA	False	NA	NA	NA	57584821	57585006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_57584800_57585000
Isoform_75275_127	chr14	+	175	1	Intergenic	novelGene_3578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	58157630	58157805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr14_+_58157600_58157800
Isoform_75277_9	chr17	+	183	1	Intergenic	novelGene_5080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	58216776	58216959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_58216800_58217000
Isoform_75279_6	chr17	-	168	1	Intergenic	novelGene_5081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	59996932	59996764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_59996800_59996900
Isoform_75282_9	chr17	+	183	1	Intergenic	novelGene_5082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGGTACATGGGG	NA	False	NA	NA	False	NA	NA	NA	63232823	63233006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_63232800_63233000
Isoform_75283_6	chr17	-	179	1	Intergenic	novelGene_5083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	63404721	63404542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_63404500_63404700
Isoform_75285_3	chr17	+	1222	1	Intergenic	novelGene_4685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTATTATACATTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	10538846	10540068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_10538800_10540100
Isoform_75286_6	chr17	-	178	1	Intergenic	novelGene_5085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGAATGCCTGC	NA	False	NA	NA	False	NA	NA	NA	63838994	63838816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_63838800_63839000
Isoform_75288_21	chr17	-	164	1	Intergenic	novelGene_5086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATTCATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	64694191	64694027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_64694000_64694200
Isoform_75290_5	chr17	-	2148	1	Antisense	novelGene_ENSMUSG00000024085.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-2	NA	65022574	65020426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_65020400_65022600
Isoform_75297_4	chr17	+	210	1	Intergenic	novelGene_5088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTCCACATCCTT	NA	False	NA	NA	False	NA	NA	NA	65883346	65883556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_65883300_65883600
Isoform_75304_35	chr17	-	176	1	Intergenic	novelGene_5089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	66003699	66003523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66003500_66003700
Isoform_75305_10	chr17	-	174	1	Intergenic	novelGene_5090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAGATAGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	66023861	66023687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66023700_66023900
Isoform_75306_3	chr17	+	177	1	Intergenic	novelGene_5091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATTTGAAAGC	NA	False	NA	NA	False	NA	NA	NA	66027957	66028134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_66028000_66028100
Isoform_7531_12	chr10	+	1040	6	ISM	ENSMUSG00000034974.14	ENSMUST00000219850.2	1482	8	6404	-17	-179	17	3prime_fragment	FALSE	canonical	3	353	junction_5	19.3659494990563	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTGTCTCCCACGCC	NA	False	NA	12	True	AATAAA	-17	NA	81026155	81028834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
Isoform_75310_5	chr17	-	1926	1	Intergenic	novelGene_5094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-20	NA	66125977	66124051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66124100_66126000
Isoform_75311_62	chr17	-	177	1	Intergenic	novelGene_5095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATGAGAC	NA	False	NA	NA	False	NA	NA	NA	66144617	66144440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66144400_66144600
Isoform_75319_327	chr17	-	161	1	Antisense	novelGene_ENSMUSG00000117250.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTTTCTTTATCATTA	NA	False	NA	-9	True	NA	NA	NA	66196186	66196025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_66196000_66196200
Isoform_75320_67	chr17	+	177	1	Intergenic	novelGene_5096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCTACTTGG	NA	False	NA	NA	False	NA	NA	NA	66197587	66197764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_66197600_66197800
Isoform_75326_72	chr17	-	176	1	Intergenic	novelGene_5097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	66252128	66251952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66252000_66252100
Isoform_75327_26	chr17	+	175	1	Intergenic	novelGene_5098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAGCTCTCAATT	NA	False	NA	2	True	NA	NA	NA	66267527	66267702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_66267500_66267700
Isoform_75328_7	chr17	+	180	1	Intergenic	novelGene_5099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGTTAACTATAA	NA	False	NA	NA	False	NA	NA	NA	66352399	66352579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_66352400_66352600
Isoform_75330_76	chr17	-	277	1	Intergenic	novelGene_5100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAATAAAAAAATA	8842	False	NA	NA	False	NA	NA	NA	66410856	66410579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66410600_66410900
Isoform_75332_5	chr17	-	173	1	Intergenic	novelGene_4686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	2816	False	NA	NA	False	NA	NA	NA	10718740	10718567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_10718600_10718700
Isoform_75335_28	chr8	+	176	1	Antisense	novelGene_ENSMUSG00000037234.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26530009	26530185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr8_+_26530000_26530200
Isoform_75336_18	chr17	-	179	1	Intergenic	novelGene_5101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAAATAAAATAT	NA	False	NA	NA	False	NA	NA	NA	66635977	66635798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66635800_66636000
Isoform_75337_4	chr17	-	5457	2	NNC	ENSMUSG00000052105.18	novel	5463	12	NA	NA	4083	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTTGGTGTCACCGT	NA	False	NA	-15	True	AATAAA	-19	NA	66649457	66643978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr17_-_66649012_66649033
Isoform_75339_3	chr17	+	622	1	Antisense	novelGene_ENSMUSG00000052105.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66685269	66685891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_66685300_66685900
Isoform_7534_3	chr10	+	1648	13	FSM	ENSMUSG00000004933.18	ENSMUST00000105328.10	2228	13	194	386	45	-2	multi-exon	FALSE	canonical	2	5	junction_9	3.36237350030534	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAACTGTCTGATGCCTG	NA	False	NA	NA	False	CATAAA	-20	NA	81093326	81098813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81093409_81094313_81094374_81095010_81095122_81095216_81095333_81095420_81095641_81095922_81096017_81096741_81096808_81097276_81097377_81097464_81097550_81097628_81097703_81097794_81097991_81098281_81098369_81098456
Isoform_75340_5	chr17	+	196	1	Intergenic	novelGene_5102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGAAAAGTTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	66687744	66687940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_66687700_66687900
Isoform_75344_11	chr17	+	218	1	Intergenic	novelGene_5104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAAAAGATTTGCCT	NA	False	NA	NA	False	NA	NA	NA	66762360	66762578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_66762400_66762600
Isoform_75346_12	chr17	-	176	1	Intergenic	novelGene_5105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTAGGGTCTGAA	NA	False	NA	NA	False	NA	NA	NA	66766996	66766820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66766800_66767000
Isoform_75348_10	chr17	-	175	1	Intergenic	novelGene_5106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTCATCATCTCT	NA	False	NA	NA	False	NA	NA	NA	66783992	66783817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66783800_66784000
Isoform_75349_20	chr17	-	2044	1	Intergenic	novelGene_5107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66791041	66788997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66789000_66791000
Isoform_75351_49	chr13	+	181	1	Intergenic	novelGene_2913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	9303899	9304080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_9303900_9304100
Isoform_75354_4	chr17	+	151	1	Intergenic	novelGene_5108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTAAAAAAAGGAATGTGT	NA	False	NA	NA	False	NA	NA	NA	66845565	66845716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_66845600_66845700
Isoform_75355_10	chr10	+	181	1	Intergenic	novelGene_910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62407718	62407899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62407700_62407900
Isoform_75356_127	chr17	-	176	1	Intergenic	novelGene_5109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACATAGAA	NA	False	NA	NA	False	NA	NA	NA	66915444	66915268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_66915300_66915400
Isoform_75358_7	chr17	+	177	1	Intergenic	novelGene_5110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGCAATGAGCTA	NA	False	NA	NA	False	NA	NA	NA	67986089	67986266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_67986100_67986300
Isoform_7536_490	chr10	+	2049	11	FSM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	45	12	-4	-1	multi-exon	FALSE	canonical	3	174	junction_1	25.7441255435099	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTGGTCAGAAGCTT	1365	False	NA	16	True	TATAAA	-19	NA	81104050	81109068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
Isoform_75361_12	chr17	-	2236	1	Intergenic	novelGene_5111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8365	False	NA	NA	False	NA	NA	NA	69266238	69264002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_69264000_69266200
Isoform_75363_7	chr17	-	4298	1	Genic_Genomic	ENSMUSG00000100572.2	novel	NA	NA	NA	NA	-2	2449	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584205	69579907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_-_69579900_69584200
Isoform_75369_66	chr17	+	176	1	Intergenic	novelGene_5112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	69671921	69672097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_69671900_69672100
Isoform_75370_3	chr17	+	178	1	Intergenic	novelGene_5113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTTTCATATCTGT	NA	False	NA	NA	False	NA	NA	NA	69680471	69680649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_69680500_69680600
Isoform_75375_5	chr17	+	846	1	FSM	ENSMUSG00000073374.4	ENSMUST00000097289.3	1471	1	-63	688	-4	-688	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTTACCCT	NA	False	NA	NA	False	AGTAAA	-10	NA	69724392	69725238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_69724400_69725200
Isoform_75377_24	chr17	+	167	1	Intergenic	novelGene_5115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAAAAGTTTCT	5883	False	NA	NA	False	NA	NA	NA	70906924	70907091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_70906900_70907100
Isoform_75378_3	chr17	+	239	1	Intergenic	novelGene_5116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTATTCAAAGACGAATAA	NA	False	NA	NA	False	AAAAAG	-29	NA	71035221	71035460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71035200_71035500
Isoform_7538_7	chr10	+	2349	9	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	174	junction_1	25.6024290839756	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTAAGTGGTCAG	1363	False	NA	10	True	TATAAA	-13	NA	81104048	81109062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108794_81108882
Isoform_75382_5	chr17	+	518	1	Antisense	novelGene_ENSMUSG00000097282.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	71058339	71058857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_71058300_71058900
Isoform_75384_18	chr17	+	167	1	Intergenic	novelGene_5117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGGTTTTAA	3133	False	NA	NA	False	NA	NA	NA	71073788	71073955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71073800_71074000
Isoform_75387_32	chr17	+	174	1	Intergenic	novelGene_5118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	71085347	71085521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71085300_71085500
Isoform_75389_22	chr17	-	177	1	Intergenic	novelGene_5119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	71090132	71089955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71090000_71090100
Isoform_7539_29	chr10	+	2034	11	NIC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	64.5607465880004	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1355	False	NA	18	True	TATAAA	-21	NA	81104040	81109070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107225_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
Isoform_75390_34	chr17	+	189	1	Intergenic	novelGene_5120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGGTGAACAGCATATT	3050	False	NA	NA	False	NA	NA	NA	71093421	71093610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71093400_71093600
Isoform_75391_76	chr17	-	180	1	Intergenic	novelGene_5121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	71099475	71099295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71099300_71099500
Isoform_75392_10	chr17	-	176	1	Intergenic	novelGene_5122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	71104448	71104272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71104300_71104400
Isoform_75393_3	chr17	-	380	1	Intergenic	novelGene_5123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	9893	False	NA	NA	False	NA	NA	NA	71117737	71117357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71117400_71117700
Isoform_75395_191	chr17	-	175	1	Intergenic	novelGene_5124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGAGACAGTTATAC	NA	False	NA	NA	False	NA	NA	NA	71131474	71131299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71131300_71131500
Isoform_75396_36	chr17	+	179	1	Intergenic	novelGene_5125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTACAGAGACGTG	NA	False	NA	NA	False	NA	NA	NA	71134749	71134928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71134700_71134900
Isoform_75397_5	chr17	-	666	1	Intergenic	novelGene_5126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	71143997	71143331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71143300_71144000
Isoform_75398_3	chr17	-	176	1	Intergenic	novelGene_5127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGATA	NA	False	NA	NA	False	NA	NA	NA	71145567	71145391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71145400_71145600
Isoform_75399_8	chr17	+	591	1	Intergenic	novelGene_5128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6412	False	NA	NA	False	NA	NA	NA	71147790	71148381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71147800_71148400
Isoform_7540_16	chr10	+	2020	11	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	67.9482155762754	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTGGTCAGAAGCTT	1363	False	NA	16	True	TATAAA	-19	NA	81104048	81109068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81104154_81104643_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
Isoform_75402_23	chr17	-	175	1	Intergenic	novelGene_5129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATCTAAGAATT	NA	False	NA	NA	False	NA	NA	NA	71162754	71162579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71162600_71162800
Isoform_75404_3	chr17	-	4822	1	Genic_Genomic	ENSMUSG00000097154.3	novel	NA	NA	NA	NA	-813	2422	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAAAACCGATCC	NA	False	NA	NA	False	NA	NA	NA	71183743	71178921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_-_71178900_71183700
Isoform_75407_4	chr17	-	4468	1	NIC	ENSMUSG00000097154.3	novel	1796	3	NA	NA	1	-46176	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAGGAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71231990	71227522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_71227500_71232000
Isoform_7541_79	chr10	+	1974	11	NIC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	59.7863696840676	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1363	False	NA	18	True	TATAAA	-21	NA	81104048	81109070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81104154_81104691_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
Isoform_75412_6	chr17	+	361	1	Intergenic	novelGene_5130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCGGCTTTCAGCTGG	NA	False	NA	NA	False	NA	NA	NA	71235640	71236001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71235600_71236000
Isoform_75427_122	chr17	+	165	1	Intergenic	novelGene_5131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTT	2578	False	NA	NA	False	NA	NA	NA	71789794	71789959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71789800_71790000
Isoform_75428_4	chr17	+	176	1	Intergenic	novelGene_5132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	71821991	71822167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71822000_71822200
Isoform_75430_24	chr17	+	207	1	Intergenic	novelGene_5133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATAATCAGATATTCA	NA	False	NA	NA	False	AAGAAA	-9	NA	71842811	71843018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71842800_71843000
Isoform_75432_107	chr17	-	176	1	Intergenic	novelGene_5134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	NA	False	NA	-2	True	NA	NA	NA	71870464	71870288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71870300_71870500
Isoform_75433_28	chr17	+	173	1	Intergenic	novelGene_5135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTTAAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	71896599	71896772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_71896600_71896800
Isoform_75443_10	chr17	-	173	1	Intergenic	novelGene_5136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	71995327	71995154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_71995200_71995300
Isoform_75445_8	chr17	+	3034	1	Intergenic	novelGene_4688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-41	NA	12979870	12982904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_12979900_12982900
Isoform_75447_52	chr17	-	175	1	Antisense	novelGene_ENSMUSG00000117292.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTATTTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	73566423	73566248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_73566200_73566400
Isoform_75450_10	chr17	+	178	1	Intergenic	novelGene_5137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTC	NA	False	NA	NA	False	NA	NA	NA	74515496	74515674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_74515500_74515700
Isoform_75451_23	chr17	+	170	1	Intergenic	novelGene_5138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATAGATTATTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74593654	74593824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_74593700_74593800
Isoform_75452_59	chr17	+	180	1	Intergenic	novelGene_5139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGGAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	74596403	74596583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_74596400_74596600
Isoform_75455_5	chr17	-	201	1	Intergenic	novelGene_5140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATTTGAGGAGACAGC	NA	False	NA	NA	False	NA	NA	NA	74644130	74643929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_74643900_74644100
Isoform_75457_28	chr17	-	177	1	Intergenic	novelGene_5141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	74708256	74708079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_74708100_74708300
Isoform_75458_10	chr17	+	180	1	Intergenic	novelGene_5142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATGCTTATCAG	9556	False	NA	NA	False	NA	NA	NA	74712281	74712461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_74712300_74712500
Isoform_75459_17	chr17	+	176	1	Intergenic	novelGene_4689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	6413	False	NA	NA	False	NA	NA	NA	13067518	13067694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_13067500_13067700
Isoform_75460_3	chr15	+	226	3	Genic_Genomic	ENSMUSG00000058057.6	novel	1652	2	NA	NA	-7922	3451	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGTCGGAGCGAGCAG	7688	False	NA	NA	False	NA	NA	NA	100224887	100241707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_+_100224969_100238093_100238147_100241615
Isoform_75461_21	chr17	+	180	1	Intergenic	novelGene_5143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCATGCCTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	74735107	74735287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_74735100_74735300
Isoform_75462_9	chr17	-	180	1	Intergenic	novelGene_5144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	74758395	74758215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_74758200_74758400
Isoform_75463_39	chr17	+	172	1	Intergenic	novelGene_5145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTCTAATCAG	NA	False	NA	NA	False	NA	NA	NA	74767070	74767242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_74767100_74767200
Isoform_75465_12	chr17	+	181	1	Intergenic	novelGene_4690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAACTTCAGAATCTGAA	NA	False	NA	NA	False	NA	NA	NA	13075867	13076048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_13075900_13076000
Isoform_75466_8	chr17	+	176	1	Intergenic	novelGene_5146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	74791576	74791752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_74791600_74791800
Isoform_75470_3	chr17	-	861	1	Genic_Genomic	ENSMUSG00000117358.2	novel	NA	NA	NA	NA	-6	-7567	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAATTGTGTCGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	74835095	74834234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_-_74834200_74835100
Isoform_75471_8	chr17	-	173	1	Intergenic	novelGene_5148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	74839561	74839388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_74839400_74839600
Isoform_75472_5	chr17	-	173	1	Intergenic	novelGene_5149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	74844324	74844151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_74844200_74844300
Isoform_75474_21	chr17	-	169	1	Intergenic	novelGene_5151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	74863077	74862908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_74862900_74863100
Isoform_75475_4	chr17	-	5637	1	Antisense	novelGene_ENSMUSG00000024073.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAAAAGCTC	9007	False	NA	NA	False	NA	NA	NA	74941294	74935657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_74935700_74941300
Isoform_75478_28	chr17	+	250	1	Intergenic	novelGene_5152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGGGAAAGTGTTAGAA	6097	False	NA	NA	False	NA	NA	NA	75011912	75012162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_75011900_75012200
Isoform_75479_14	chr17	+	204	1	Intergenic	novelGene_5153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTGACATATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	75241279	75241483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_75241300_75241500
Isoform_7548_8	chr10	+	4319	19	FSM	ENSMUSG00000034902.18	ENSMUST00000045469.15	4323	19	-5	9	-4	-8	multi-exon	FALSE	canonical	2	3	junction_17	62.7837755246991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAACAGCTCCTCTCC	5012	False	NA	NA	False	AATAAA	-7	NA	81128833	81155798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81151712_81151791_81153159_81153238_81153599
Isoform_75480_285	chr17	+	171	1	Intergenic	novelGene_5154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	75268938	75269109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_75268900_75269100
Isoform_75487_43	chr17	+	178	1	Intergenic	novelGene_5155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGT	NA	False	NA	NA	False	NA	NA	NA	78477872	78478050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_78477900_78478000
Isoform_75488_7	chr17	+	214	1	Intergenic	novelGene_5156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGATAAAATTAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	78699238	78699452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_78699200_78699500
Isoform_75493_3	chr17	+	1422	1	FSM	ENSMUSG00000061062.6	ENSMUST00000079363.6	1444	1	549	-527	549	527	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAATATCTAATAA	NA	False	NA	85	True	AATAAA	-28	NA	78799559	78800981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_78799600_78801000
Isoform_75496_4	chr17	+	299	1	Intergenic	novelGene_5157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	79019226	79019525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_79019200_79019500
Isoform_75497_10	chr17	+	179	1	Intergenic	novelGene_5158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACTACCACCTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	79050927	79051106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_79050900_79051100
Isoform_75499_15	chr17	+	190	1	Intergenic	novelGene_5159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCACCTCCTCCT	NA	False	NA	NA	False	AATACA	-15	NA	79095792	79095982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_79095800_79096000
Isoform_7550_239	chr10	+	4258	18	FSM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	11	-1718	3	0	multi-exon	FALSE	canonical	3	84	junction_16	35.5956725335284	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	5003	False	NA	NA	False	AATAAA	-15	NA	81128824	81155806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
Isoform_75509_38	chr17	-	185	1	Intergenic	novelGene_4691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAATAAATTAATTAAT	NA	False	NA	NA	False	NA	NA	NA	13149484	13149299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_13149300_13149500
Isoform_75510_3	chr17	-	543	1	Intergenic	novelGene_5160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTGGAAAAAAAAAGAAA	9131	False	NA	NA	False	AATAAA	-42	NA	79705946	79705403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_79705400_79705900
Isoform_75511_3	chr17	-	338	1	Antisense	novelGene_ENSMUSG00000036368.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	79921458	79921120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_79921100_79921500
Isoform_75513_9	chr17	+	230	1	Intergenic	novelGene_5161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGGAAAACTGGGTGTA	NA	False	NA	NA	False	TTTAAA	-11	NA	80084333	80084563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_80084300_80084600
Isoform_75521_24	chr17	+	180	1	Intergenic	novelGene_5162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	80421306	80421486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_80421300_80421500
Isoform_75522_107	chr17	-	186	1	Intergenic	novelGene_5163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	80427918	80427732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_80427700_80427900
Isoform_75523_4	chr17	-	286	1	Intergenic	novelGene_5164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGACAGAACGA	9008	False	NA	NA	False	NA	NA	NA	80441628	80441342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_80441300_80441600
Isoform_75526_5	chr17	+	174	1	Intergenic	novelGene_5165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAGAATCACA	NA	False	NA	NA	False	NA	NA	NA	80493695	80493869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_80493700_80493900
Isoform_7553_308	chr10	+	4178	17	FSM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	28	2	3	-2	multi-exon	FALSE	canonical	3	97	junction_16	27.8766815636295	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTCCTCTCCGGTGAC	5003	False	NA	NA	False	AATAAA	-13	NA	81128824	81155804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
Isoform_75537_43	chr17	-	189	1	Intergenic	novelGene_5166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAACTTTCTTCATTTAT	NA	False	NA	-1	True	NA	NA	NA	80521606	80521417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_80521400_80521600
Isoform_75538_15	chr17	-	158	1	Intergenic	novelGene_5167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAGAAAAAAGAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	80532369	80532211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_80532200_80532400
Isoform_75539_243	chr17	+	185	1	Intergenic	novelGene_5168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGACATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	80532798	80532983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_80532800_80533000
Isoform_75544_7	chr17	+	400	1	Intergenic	novelGene_5169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	80584097	80584497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_80584100_80584500
Isoform_75545_10	chr17	-	156	1	Intergenic	novelGene_5170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAATAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80608645	80608489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_80608500_80608600
Isoform_75546_6	chr17	-	883	1	FSM	ENSMUSG00000066938.2	ENSMUST00000086549.2	324	1	-14	-545	-14	545	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCAGCAG	NA	False	NA	NA	False	NA	NA	NA	80680984	80680101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_80680100_80681000
Isoform_75547_7	chr17	-	178	1	Intergenic	novelGene_5171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGAGTTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	80687042	80686864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_80686900_80687000
Isoform_75548_20	chr17	+	1421	1	Intergenic	novelGene_5172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80746803	80748224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_80746800_80748200
Isoform_75550_3	chr17	+	1682	1	Intergenic	novelGene_5173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80780988	80782670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_80781000_80782700
Isoform_75551_5	chr17	+	937	1	Intergenic	novelGene_5174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80781734	80782671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_80781700_80782700
Isoform_75552_42	chr17	+	225	1	Intergenic	novelGene_5175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTTTCTTTGTTTCCT	NA	False	NA	NA	False	AAGAAA	-14	NA	80797186	80797411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_80797200_80797400
Isoform_75554_5	chr17	-	178	1	Intergenic	novelGene_5176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGCTGCAA	NA	False	NA	NA	False	NA	NA	NA	80859571	80859393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_80859400_80859600
Isoform_75556_34	chr17	-	206	1	Intergenic	novelGene_5177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATAGTTTTGGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	80944462	80944256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_80944300_80944500
Isoform_75558_8	chr17	-	203	1	Intergenic	novelGene_5178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGATAGATACCACTTAC	5394	False	NA	NA	False	NA	NA	NA	81556562	81556359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_81556400_81556600
Isoform_75562_286	chr17	+	178	1	Intergenic	novelGene_5179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	82023649	82023827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_82023600_82023800
Isoform_75563_11	chr17	+	184	1	Intergenic	novelGene_5180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGGAGAGGGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	82064384	82064568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_82064400_82064600
Isoform_75564_7	chr17	-	269	1	FSM	ENSMUSG00000117438.2	ENSMUST00000234808.2	885	1	684	-68	684	68	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	82717564	82717295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_82717300_82717600
Isoform_75569_94	chr17	+	158	1	Intergenic	novelGene_5182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGTAGACTTTG	NA	False	NA	4	True	NA	NA	NA	83605387	83605545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_83605400_83605500
Isoform_75570_8	chr17	+	287	1	Intergenic	novelGene_5183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCCCATTACAGAACCTT	NA	False	NA	NA	False	NA	NA	NA	83629261	83629548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_83629300_83629500
Isoform_75583_288	chr2	+	178	1	Intergenic	novelGene_6254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	60325243	60325421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_60325200_60325400
Isoform_75586_16	chr17	-	177	1	Intergenic	novelGene_5185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	83886853	83886676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_83886700_83886900
Isoform_75588_28	chr17	+	173	1	Intergenic	novelGene_5186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATATTAATAA	NA	False	NA	NA	False	NA	NA	NA	83963496	83963669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_83963500_83963700
Isoform_75589_38	chr17	-	165	1	Intergenic	novelGene_5187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACACCACCACCA	NA	False	NA	NA	False	NA	NA	NA	83992804	83992639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_83992600_83992800
Isoform_75591_5	chr17	-	192	1	Intergenic	novelGene_5188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCGCCTTGGTCATGGTG	9225	False	NA	NA	False	NA	NA	NA	84178721	84178529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_84178500_84178700
Isoform_75593_10	chr17	+	165	1	Intergenic	novelGene_5189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	84388764	84388929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_84388800_84388900
Isoform_75594_21	chr17	+	151	1	Intergenic	novelGene_5190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAACAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	84438218	84438369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_84438200_84438400
Isoform_75597_7	chr17	-	3403	1	NIC	ENSMUSG00000045817.9	novel	3530	2	NA	NA	613	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAACTCTTTGAGTAA	NA	False	NA	NA	False	AATAAA	-9	NA	84494762	84491359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_84491400_84494800
Isoform_75598_63	chr17	-	177	1	Intergenic	novelGene_5191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATAGAATT	NA	False	NA	NA	False	NA	NA	NA	84517578	84517401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_84517400_84517600
Isoform_75600_6	chr17	-	175	1	Intergenic	novelGene_5192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATTTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	84624088	84623913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_84623900_84624100
Isoform_75601_7	chr17	+	2513	1	Intergenic	novelGene_5194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACACCAAAAAAAAAAA	5653	False	NA	NA	False	NA	NA	NA	84632175	84634688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_84632200_84634700
Isoform_75602_9	chr17	+	2398	1	Intergenic	novelGene_5193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCGCACA	5653	False	NA	NA	False	NA	NA	NA	84632175	84634573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_84632200_84634600
Isoform_75604_5	chr17	-	163	1	Intergenic	novelGene_4692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCATTCTCCCAA	NA	False	NA	NA	False	NA	NA	NA	13216369	13216206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_13216200_13216400
Isoform_75607_18	chr17	-	175	1	Intergenic	novelGene_4693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATTGAGGACAT	NA	False	NA	NA	False	NA	NA	NA	13221445	13221270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_13221300_13221400
Isoform_75609_7	chr17	+	267	1	Intergenic	novelGene_5195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTAATTCTAGATGAA	NA	False	NA	NA	False	NA	NA	NA	85136483	85136750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_85136500_85136800
Isoform_7561_1218	chr10	+	2603	9	FSM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	110	2	110	-2	multi-exon	FALSE	canonical	3	160	junction_2	15.2786615905975	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGCTTCTGATCTGAGT	5579	False	NA	14	True	AATAGA	-13	NA	81157046	81162074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
Isoform_75612_31	chr17	-	4527	2	Antisense	novelGene_ENSMUSG00000061130.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85274982	85270415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_85270726_85270765
Isoform_75619_16	chr17	-	177	1	Intergenic	novelGene_5196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAATAACCCATGGG	NA	False	NA	NA	False	NA	NA	NA	85349441	85349264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_85349300_85349400
Isoform_7562_14	chr10	+	2888	9	FSM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	-175	2	-175	-2	multi-exon	FALSE	canonical	3	160	junction_2	15.2786615905975	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGCTTCTGATCTGAGT	5294	False	NA	14	True	AATAGA	-13	NA	81156761	81162074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
Isoform_75620_15	chr17	-	176	1	Intergenic	novelGene_5197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85412059	85411883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_85411900_85412100
Isoform_75621_56	chr17	-	175	1	Intergenic	novelGene_5198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	85414974	85414799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_85414800_85415000
Isoform_75624_76	chr17	-	174	1	Intergenic	novelGene_5199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATCATTATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	85468049	85467875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_85467900_85468000
Isoform_75625_17	chr7	-	160	1	Intergenic	novelGene_10056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAAAAATTTA	2497	False	NA	NA	False	NA	NA	NA	45177056	45176896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_45176900_45177100
Isoform_75626_26	chr17	-	182	1	Intergenic	novelGene_4650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGACTGGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	3572300	3572118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_3572100_3572300
Isoform_75627_4	chr17	-	188	1	Intergenic	novelGene_5201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTTTCAAAAGG	NA	False	NA	NA	False	NA	NA	NA	85469338	85469150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_85469200_85469300
Isoform_75628_4	chr17	-	155	1	Intergenic	novelGene_5202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATAAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	85483956	85483801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_85483800_85484000
Isoform_7564_20	chr10	+	2398	8	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	121	-3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_5	59.2982774984714	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5590	False	NA	13	True	AATAGA	-12	NA	81157057	81162073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160702_81160823_81160923_81161211_81161297
Isoform_75643_5	chr17	-	168	1	Intergenic	novelGene_5203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	86088760	86088592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_86088600_86088800
Isoform_75644_7	chr6	+	178	1	Intergenic	novelGene_9247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	33602342	33602520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_+_33602300_33602500
Isoform_75646_4	chr17	-	169	1	Intergenic	novelGene_5205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAATCACACGG	NA	False	NA	NA	False	NA	NA	NA	86766314	86766145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_86766100_86766300
Isoform_75649_4	chr17	+	179	1	Intergenic	novelGene_5206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAAACTAGCCA	NA	False	NA	NA	False	NA	NA	NA	87300393	87300572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_87300400_87300600
Isoform_75650_3	chr17	+	180	1	Intergenic	novelGene_5207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAGAATAAACTAGAAG	NA	False	NA	NA	False	NA	NA	NA	87377993	87378173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_87378000_87378200
Isoform_75652_7	chr17	+	179	1	Intergenic	novelGene_5208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATTGCCATT	NA	False	NA	NA	False	NA	NA	NA	87550091	87550270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_87550100_87550300
Isoform_75654_11	chr17	+	945	1	FSM	ENSMUSG00000036918.17	ENSMUST00000234468.2	868	1	-75	-2	-13	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGACCGATGCGTTTGG	NA	False	NA	NA	False	AATAAA	-28	NA	87590300	87591245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_87590300_87591200
Isoform_75662_38	chr17	-	171	1	Intergenic	novelGene_5210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87890915	87890744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_87890700_87890900
Isoform_75663_10	chr17	+	172	1	Intergenic	novelGene_5211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	87961398	87961570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_87961400_87961600
Isoform_75664_23	chr17	-	1620	1	Antisense	novelGene_ENSMUSG00000024151.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACCTAGAAACT	NA	False	NA	NA	False	NA	NA	NA	87990204	87988584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_87988600_87990200
Isoform_75665_3	chr17	+	5572	1	Antisense	novelGene_ENSMUSG00000036983.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAACACACCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	3586420	3591992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_3586400_3592000
Isoform_75668_5	chr17	-	1063	1	NIC	ENSMUSG00000050138.9	novel	1972	2	NA	NA	51099	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACGAAACCAAAAAAACA	3889	False	NA	NA	False	NA	NA	NA	88054323	88053260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_88053300_88054300
Isoform_75673_5	chr17	-	1095	1	Intergenic	novelGene_5214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88282333	88281238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_88281200_88282300
Isoform_75674_21	chr17	-	5811	1	Antisense	novelGene_ENSMUSG00000005370.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	88290435	88284624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_88284600_88290400
Isoform_75676_3	chr17	+	150	1	Intergenic	novelGene_5215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	88361270	88361420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_88361300_88361400
Isoform_75677_7	chr17	-	181	1	Intergenic	novelGene_5217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGC	NA	False	NA	NA	False	NA	NA	NA	88392376	88392195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_88392200_88392400
Isoform_75678_38	chr17	+	179	1	Intergenic	novelGene_5218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAGAAGAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	88393824	88394003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_88393800_88394000
Isoform_75680_20	chr17	+	177	1	Intergenic	novelGene_5219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88398917	88399094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_88398900_88399100
Isoform_75681_7	chr17	+	199	1	Intergenic	novelGene_5220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATCTTCTTAAAAAGTAC	NA	False	NA	NA	False	TTTAAA	-8	NA	88402386	88402585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_88402400_88402600
Isoform_75683_8	chr17	-	169	1	Intergenic	novelGene_5221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	88410751	88410582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_88410600_88410800
Isoform_75686_4	chr17	+	177	1	Intergenic	novelGene_5222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	88608932	88609109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_88608900_88609100
Isoform_75687_8	chr17	-	165	1	Intergenic	novelGene_5223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	88741614	88741449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_88741400_88741600
Isoform_75688_3	chr17	+	2565	1	NIC	ENSMUSG00000090211.4	novel	2463	3	NA	NA	16	-7659	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	13721231	13723796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_13721200_13723800
Isoform_75689_6	chr17	-	624	1	Antisense	novelGene_ENSMUSG00000090211.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAACAGAGAAGATTAAACA	NA	False	NA	NA	False	AATATA	-31	NA	13723055	13722431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_13722400_13723100
Isoform_75695_19	chr17	-	1386	1	Antisense	novelGene_ENSMUSG00000034998.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAAAAGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	88795922	88794536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_88794500_88795900
Isoform_75696_7	chr17	-	1931	1	Antisense	novelGene_ENSMUSG00000034998.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAAAAGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	88796467	88794536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_88794500_88796500
Isoform_7570_14	chr10	+	2957	8	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	107	-3	intron_retention	FALSE	canonical	3	160	junction_2	15.6283363784884	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5576	False	NA	13	True	AATAGA	-12	NA	81157043	81162073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81157281_81158271_81158840_81158954_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
Isoform_75717_16	chr17	-	178	1	Intergenic	novelGene_5224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATATATAATATAAAA	NA	False	NA	NA	False	NA	NA	NA	88817301	88817123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_88817100_88817300
Isoform_75718_40	chr17	-	179	1	Intergenic	novelGene_5225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTCATCTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	88949877	88949698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_88949700_88949900
Isoform_75719_4365	chr17	-	1968	1	FSM	ENSMUSG00000066878.6	ENSMUST00000086423.6	1988	1	7	13	7	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	4365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	90217870	90215902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_90215900_90217900
Isoform_75731_8	chr17	+	176	1	Intergenic	novelGene_5226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTCCTTAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	90435701	90435877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_90435700_90435900
Isoform_75733_34	chr17	+	1362	1	FSM	ENSMUSG00000043346.10	ENSMUST00000057074.10	747	1	-34	-581	-34	581	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGCCATCACCAAGTAC	NA	False	NA	NA	False	ATTAAA	-44	NA	91544204	91545566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_91544200_91545600
Isoform_75734_96	chr17	+	174	1	Intergenic	novelGene_5227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92619508	92619682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_92619500_92619700
Isoform_75735_6	chr17	+	176	1	Intergenic	novelGene_5228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTCAAACCATT	NA	False	NA	NA	False	NA	NA	NA	92969123	92969299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_92969100_92969300
Isoform_75738_228	chr17	-	182	1	Intergenic	novelGene_5229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94393189	94393007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_94393000_94393200
Isoform_75739_16	chr17	+	176	1	Intergenic	novelGene_5230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGCACTGGAAAT	NA	False	NA	NA	False	NA	NA	NA	94941372	94941548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_94941400_94941500
Isoform_75740_125	chr17	+	5122	2	Intergenic	novelGene_5231	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94990131	94995297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_94992660_94992703
Isoform_75744_37	chr17	+	4725	2	Intergenic	novelGene_5232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94990519	94995293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_94992676_94992724
Isoform_75745_106	chr17	+	4594	2	Intergenic	novelGene_5233	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94990650	94995293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_94992676_94992724
Isoform_75746_130	chr17	+	4432	2	Intergenic	novelGene_5234	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94990812	94995293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_94992676_94992724
Isoform_75758_24	chr17	+	3310	2	Intergenic	novelGene_5235	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94991943	94995294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_94992678_94992718
Isoform_75768_204	chr17	+	2541	1	Intergenic	novelGene_5236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94992753	94995294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_94992800_94995300
Isoform_7577_9	chr10	+	1811	3	FSM	ENSMUSG00000034881.9	ENSMUST00000105325.4	1765	3	-26	-20	-26	20	multi-exon	FALSE	canonical	1	1	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCCCTGTGTCCATTCG	3820	False	NA	NA	False	AATAAA	-35	NA	81164538	81171026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81164752_81168225_81169090_81170292
Isoform_75771_12	chr17	+	183	1	Intergenic	novelGene_4695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAAGGCCA	NA	False	NA	NA	False	NA	NA	NA	13777764	13777947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_13777800_13777900
Isoform_75772_11	chr17	+	3637	1	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	-3264	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	95057543	95061180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_95057500_95061200
Isoform_75773_43	chr17	+	177	1	Intergenic	novelGene_4696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGTAGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	13796467	13796644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_13796500_13796600
Isoform_75774_6	chr17	+	202	1	Intergenic	novelGene_5237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATATATATATAG	NA	False	NA	NA	False	NA	NA	NA	95162345	95162547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_95162300_95162500
Isoform_75775_3	chr17	-	758	1	Intergenic	novelGene_5238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	95172229	95171471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_95171500_95172200
Isoform_75776_3	chr17	-	231	1	Intergenic	novelGene_5239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTGGGAGGTAG	NA	False	NA	NA	False	AAAAAG	-31	NA	95177252	95177021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_95177000_95177300
Isoform_75778_5	chr17	-	173	1	Intergenic	novelGene_4697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAGATTGCTTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	13917173	13917000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_13917000_13917200
Isoform_75781_8	chr17	+	174	1	Intergenic	novelGene_4651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTAAAATATTGGAATG	NA	False	NA	NA	False	NA	NA	NA	4102407	4102581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_4102400_4102600
Isoform_75782_6	chr17	-	1722	1	Intergenic	novelGene_4698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATAATGATCAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	14004390	14002668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_14002700_14004400
Isoform_75783_5	chr17	-	3750	1	Antisense	novelGene_ENSMUSG00000068036.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14074063	14070313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_14070300_14074100
Isoform_75789_37	chr17	-	692	1	NIC	ENSMUSG00000048826.8	novel	3250	4	NA	NA	325	-5255	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	14424031	14423339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_14423300_14424000
Isoform_75790_49	chr17	+	178	1	Intergenic	novelGene_4699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTACATCTTT	NA	False	NA	NA	False	NA	NA	NA	15067880	15068058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_15067900_15068100
Isoform_75792_38	chr17	+	1763	1	NIC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	-2	4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAAGGTCATCGTTAA	NA	False	NA	12	True	AATAAA	-17	NA	15163489	15165252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15163500_15165300
Isoform_75793_18	chr17	+	2710	1	NIC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	-4	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTGGTGCTGTTACTTT	NA	False	NA	8	True	AATAAA	-16	NA	15163487	15166197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15163500_15166200
Isoform_75797_52	chr17	-	1657	1	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCATTCTGTTCTGTTCGT	NA	False	NA	NA	False	NA	NA	NA	15213124	15211467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_15211500_15213100
Isoform_75802_3	chr17	-	253	1	Intergenic	novelGene_4701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCAGCT	NA	False	NA	NA	False	NA	NA	NA	15241507	15241254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_15241300_15241500
Isoform_75803_3	chr17	-	3232	1	Antisense	novelGene_ENSMUSG00000116895.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	15244489	15241257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_15241300_15244500
Isoform_75805_52	chr17	-	1660	1	Intergenic	novelGene_4703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCATTCTGTTCTGTTCG	NA	False	NA	NA	False	NA	NA	NA	15244496	15242836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_15242800_15244500
Isoform_75806_23	chr17	-	1993	1	Intergenic	novelGene_4704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCATTCTGTTCTGTTCG	NA	False	NA	NA	False	NA	NA	NA	15244829	15242836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_15242800_15244800
Isoform_75808_5	chr17	+	302	1	Intergenic	novelGene_4705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTGCTGTATTTGAA	NA	False	NA	NA	False	NA	NA	NA	15267982	15268284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_15268000_15268300
Isoform_75809_4	chr17	+	179	1	Intergenic	novelGene_4700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15236606	15236785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_15236600_15236800
Isoform_7581_360	chr10	+	3918	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	51	2	-10	-2	multi-exon	FALSE	canonical	3	201	junction_9	22.6077666104176	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	873	False	NA	28	True	AATAAA	-19	NA	81193375	81202057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
Isoform_75810_3	chr17	+	2445	1	NIC	ENSMUSG00000014763.9	novel	4420	11	NA	NA	23	-10138	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAGAAAAAAAACAAAAAA	NA	False	NA	NA	False	AATATA	-45	NA	15616532	15618977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_15616500_15619000
Isoform_75813_5	chr17	-	177	1	Intergenic	novelGene_4706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAGATGACACGCT	NA	False	NA	NA	False	NA	NA	NA	15753647	15753470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_15753500_15753600
Isoform_75815_18	chr17	+	218	1	Intergenic	novelGene_4707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGATTGTCTAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	15791823	15792041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_15791800_15792000
Isoform_75819_8	chr17	+	235	1	Intergenic	novelGene_4708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTAGATATTTTCTT	NA	False	NA	NA	False	AAGAAA	-9	NA	15878372	15878607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_15878400_15878600
Isoform_75820_4	chr17	-	212	1	Intergenic	novelGene_4709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCATTTAAAAATTCTC	NA	False	NA	NA	False	NA	NA	NA	15886342	15886130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_15886100_15886300
Isoform_75821_18	chr17	+	174	1	Intergenic	novelGene_4710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	15911653	15911827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_15911700_15911800
Isoform_75822_3	chr17	+	976	1	NIC	ENSMUSG00000069729.15	novel	7150	19	NA	NA	-515	-100852	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5046180	5047156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_5046200_5047200
Isoform_75823_10	chr17	-	975	1	Intergenic	novelGene_4711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15967020	15966045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_15966000_15967000
Isoform_75825_4	chr17	-	175	1	Intergenic	novelGene_4712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGAAGGTAAC	NA	False	NA	NA	False	NA	NA	NA	15971811	15971636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_15971600_15971800
Isoform_75827_3	chr17	+	3506	2	Antisense	novelGene_ENSMUSG00000048027.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAGAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16032830	16036372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_16036239_16036274
Isoform_75830_11	chr17	+	201	1	Intergenic	novelGene_4713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTTTCATTCTG	NA	False	NA	NA	False	NA	NA	NA	17116348	17116549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17116300_17116500
Isoform_75833_3	chr17	+	249	1	Intergenic	novelGene_4714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTTGGTGTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	17150261	17150510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17150300_17150500
Isoform_75836_3	chr17	+	672	1	Intergenic	novelGene_4715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAACAAAACCATACTAG	NA	False	NA	NA	False	NA	NA	NA	17217568	17218240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17217600_17218200
Isoform_75839_4	chr17	-	2098	1	Intergenic	novelGene_4716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGTTATCAA	NA	False	NA	NA	False	NA	NA	NA	17287927	17285829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_17285800_17287900
Isoform_75841_5	chr17	-	176	1	Intergenic	novelGene_4725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	17419631	17419455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_17419500_17419600
Isoform_75847_5	chr17	-	946	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	63	-324	63	324	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGTACTAAACCTCAA	NA	False	NA	NA	False	NA	NA	NA	17566339	17565393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_17565400_17566300
Isoform_75849_19	chr17	-	924	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	-73	-166	-73	166	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGTTTAAG	NA	False	NA	NA	False	AATAAA	-14	NA	17566475	17565551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_17565600_17566500
Isoform_75853_9	chr17	-	176	1	Intergenic	novelGene_4726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACCTAA	NA	False	NA	NA	False	NA	NA	NA	17645034	17644858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_17644900_17645000
Isoform_75854_147	chr17	-	175	1	Intergenic	novelGene_4727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17715567	17715392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_17715400_17715600
Isoform_75855_27	chr17	-	171	1	Intergenic	novelGene_4652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAAAAAGGTG	5029	False	NA	NA	False	NA	NA	NA	5212265	5212094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_5212100_5212300
Isoform_75860_7	chr17	-	4825	1	ISM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	98813	0	49325	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATGGATTCATCTGA	NA	False	NA	NA	False	AATAAA	-17	NA	17746496	17741671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_17741700_17746500
Isoform_75862_6	chr17	-	5266	1	ISM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	98363	9	48875	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAAATATTGTATGGA	NA	False	NA	NA	False	AATAAA	-8	NA	17746946	17741680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_17741700_17746900
Isoform_75863_5	chr17	-	5790	1	ISM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	97843	5	48355	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATTGTATGGATTCA	NA	False	NA	NA	False	AATAAA	-12	NA	17747466	17741676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_17741700_17747500
Isoform_75870_23	chr17	+	177	1	Intergenic	novelGene_4728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGTGGAAAAAGAAA	8140	False	NA	NA	False	NA	NA	NA	17958102	17958279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_17958100_17958300
Isoform_75871_17	chr17	+	163	1	Intergenic	novelGene_4729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATGTTTAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	18642414	18642577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_18642400_18642600
Isoform_75872_12	chr17	-	168	1	Intergenic	novelGene_4653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCTCCACAGCATCTCA	NA	False	NA	NA	False	NA	NA	NA	5266267	5266099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_5266100_5266300
Isoform_75874_14	chr17	+	220	1	Intergenic	novelGene_4730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTTGAT	NA	False	NA	NA	False	AAAAAG	-13	NA	20319928	20320148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_20319900_20320100
Isoform_75876_4	chr17	-	8471	1	Antisense	novelGene_ENSMUSG00000067942.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	21245271	21236800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_-_21236800_21245300
Isoform_75878_11	chr17	-	178	1	Intergenic	novelGene_4654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGAGGCT	NA	False	NA	NA	False	NA	NA	NA	5326939	5326761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_5326800_5326900
Isoform_75879_38	chr17	-	181	1	Intergenic	novelGene_4731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAAATGTCAGA	4414	False	NA	NA	False	NA	NA	NA	21646038	21645857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_21645900_21646000
Isoform_75880_42	chr17	+	177	1	Intergenic	novelGene_4732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAAAGTTTTTT	8855	False	NA	NA	False	NA	NA	NA	21659490	21659667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_21659500_21659700
Isoform_75882_3	chr17	-	209	1	Intergenic	novelGene_4733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21744158	21743949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_21743900_21744200
Isoform_75883_6	chr17	+	173	1	Intergenic	novelGene_4734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAACTACAAA	NA	False	NA	NA	False	NA	NA	NA	21747044	21747217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_21747000_21747200
Isoform_75884_5	chr17	-	160	1	Intergenic	novelGene_4735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAATCTAAAA	NA	False	NA	NA	False	NA	NA	NA	21774668	21774508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_21774500_21774700
Isoform_75885_4	chr17	+	940	1	NIC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	14	-10958	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	21869558	21870498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_21869600_21870500
Isoform_75887_3	chr17	-	4773	1	Intergenic	novelGene_4736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTCTTAGCTCGTT	NA	False	NA	NA	False	NA	NA	NA	21949512	21944739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_21944700_21949500
Isoform_75892_48	chr17	+	193	1	Intergenic	novelGene_4737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGGGTTTAGATA	NA	False	NA	NA	False	NA	NA	NA	22079106	22079299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_22079100_22079300
Isoform_75897_6	chr17	-	335	1	Intergenic	novelGene_4649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3139823	3139488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_3139500_3139800
Isoform_75899_7	chr17	-	1409	1	FSM	ENSMUSG00000101959.2	ENSMUST00000189788.2	1445	1	37	-1	37	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTTTTTGCCTGTTGG	NA	False	NA	NA	False	ATTAAA	-21	NA	5469005	5467596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_5467600_5469000
Isoform_75900_22	chr17	-	227	1	Intergenic	novelGene_4738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAATAGAAAACATAAA	8886	False	NA	NA	False	NA	NA	NA	23801143	23800916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_23800900_23801100
Isoform_75901_168	chr17	+	220	1	Intergenic	novelGene_4739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAGTTAAAAAAAAAAA	11	False	NA	NA	False	NA	NA	NA	23808077	23808297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_23808100_23808300
Isoform_75902_28	chr17	+	199	1	Intergenic	novelGene_4740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTTTTTTAAAAA	1506	False	NA	NA	False	NA	NA	NA	23809647	23809846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_23809600_23809800
Isoform_75903_9	chr17	+	2595	1	Intergenic	novelGene_4741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	2986	False	NA	NA	False	NA	NA	NA	23811127	23813722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_23811100_23813700
Isoform_75905_8	chr17	+	2595	1	Genic_Genomic	ENSMUSG00000023902.19	novel	NA	NA	NA	NA	-6	-3726	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	873	False	NA	NA	False	NA	NA	NA	23819823	23822418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_+_23819800_23822400
Isoform_75910_31	chr17	+	177	1	Intergenic	novelGene_4742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4613	False	NA	NA	False	NA	NA	NA	23833868	23834045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_23833900_23834000
Isoform_75911_41	chr17	-	171	1	Intergenic	novelGene_4743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	23867306	23867135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_23867100_23867300
Isoform_75912_6	chr17	-	176	1	Intergenic	novelGene_4744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAATAATAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	23868171	23867995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_23868000_23868200
Isoform_75913_6	chr17	+	167	1	Intergenic	novelGene_4745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAAAGGTA	3463	False	NA	NA	False	NA	NA	NA	23871564	23871731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_23871600_23871700
Isoform_75920_40	chr17	-	170	1	Intergenic	novelGene_4746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTGACT	NA	False	NA	NA	False	NA	NA	NA	23986811	23986641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_23986600_23986800
Isoform_75921_7	chr17	-	187	1	Intergenic	novelGene_4747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTCTTTGGAACTGGC	6506	False	NA	-11	True	NA	NA	NA	23991595	23991408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_23991400_23991600
Isoform_75922_108	chr17	+	176	1	Intergenic	novelGene_4748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGGTTTGG	NA	False	NA	4	True	NA	NA	NA	24001075	24001251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24001100_24001300
Isoform_75923_3	chr17	+	190	1	Intergenic	novelGene_4749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24013278	24013468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24013300_24013500
Isoform_75924_128	chr17	-	164	1	Intergenic	novelGene_4750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAATTTAAAA	6053	False	NA	NA	False	NA	NA	NA	24019183	24019019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_24019000_24019200
Isoform_75925_3	chr17	-	325	1	Intergenic	novelGene_4751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTTTTTGTTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	24032826	24032501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_24032500_24032800
Isoform_75929_6	chr17	-	182	1	Intergenic	novelGene_4752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTTATTTTTATTA	8367	False	NA	NA	False	NA	NA	NA	24065117	24064935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_24064900_24065100
Isoform_75933_3	chr17	-	1336	1	Intergenic	novelGene_4753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCCAAAAAAACAAA	5978	False	NA	NA	False	NA	NA	NA	24245411	24244075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_24244100_24245400
Isoform_75934_10	chr17	-	533	1	Intergenic	novelGene_4754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAACA	9	True	NA	NA	False	NA	NA	NA	24251342	24250809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_24250800_24251300
Isoform_75935_4	chr17	+	1462	1	NIC	ENSMUSG00000050762.6	novel	1253	6	NA	NA	6344	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	24263461	24264923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_24263500_24264900
Isoform_75938_9	chr17	+	161	1	Intergenic	novelGene_4755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	24273381	24273542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24273400_24273500
Isoform_7594_19	chr10	+	1632	4	ISM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	37	1	-2	-1	intron_retention	FALSE	canonical	3	742	junction_3	22.6862660362314	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGCTCCTGCTGTGT	NA	False	NA	14	True	AATAAA	-18	NA	81220298	81224185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073
Isoform_7595_1249	chr10	+	1429	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	14	1	14	-1	multi-exon	FALSE	canonical	3	742	junction_3	32.2286751201473	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGCTCCTGCTGTGT	NA	False	NA	14	True	AATAAA	-18	NA	81220275	81224185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
Isoform_75960_6	chr11	+	179	1	Intergenic	novelGene_1831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79038903	79039082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_79038900_79039100
Isoform_75962_18	chr17	-	175	1	Intergenic	novelGene_4756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAGCAAAATA	NA	False	NA	NA	False	NA	NA	NA	24352180	24352005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_24352000_24352200
Isoform_75964_1058	chr15	-	651	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	80	0	80	0	multi-exon	FALSE	canonical	3	3206	junction_4	667.870870752723	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3981	False	NA	-11	True	AATAAA	-17	NA	102579482	102571298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
Isoform_75971_14	chr17	-	177	1	ISM	ENSMUSG00000036473.17	ENSMUST00000168410.9	7683	8	29734	194	5354	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	24394775	24394598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr17_-_24394600_24394800
Isoform_75972_3	chr17	+	177	1	Intergenic	novelGene_4757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGCCCGCCG	7915	False	NA	NA	False	NA	NA	NA	24406524	24406701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24406500_24406700
Isoform_75973_8	chr17	-	1674	1	NIC	ENSMUSG00000036473.17	novel	7683	8	NA	NA	-2	-14182	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	AGTAAA	-36	NA	24424495	24422821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_24422800_24424500
Isoform_75976_10	chr17	+	653	1	NIC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	48	-48078	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	5891674	5892327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_5891700_5892300
Isoform_75977_10	chr17	+	192	1	Intergenic	novelGene_4758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	24517090	24517282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24517100_24517300
Isoform_75978_5	chr17	+	182	1	Intergenic	novelGene_4759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTTAAAAAATGTAT	6827	False	NA	NA	False	NA	NA	NA	24599972	24600154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24600000_24600200
Isoform_75980_58	chr17	+	1987	1	FSM	ENSMUSG00000034681.18	ENSMUST00000234342.2	2106	1	122	-3	-7	3	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	925	False	NA	NA	False	NA	NA	NA	24633660	24635647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24633700_24635600
Isoform_75983_74	chr17	+	177	1	Intergenic	novelGene_4760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGGTATAATCT	NA	False	NA	NA	False	NA	NA	NA	24688082	24688259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24688100_24688300
Isoform_75984_46	chr17	+	167	1	Intergenic	novelGene_4761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGTATTAATAGTTAA	NA	False	NA	6	True	NA	NA	NA	24688533	24688700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24688500_24688700
Isoform_75986_126	chr17	+	2676	1	FSM	ENSMUSG00000043445.8	ENSMUST00000234216.2	2428	1	-5	-243	-5	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGGTCTGCCTTCCTCT	NA	False	NA	20	True	ATTAAA	-17	NA	24689403	24692079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24689400_24692100
Isoform_75990_9	chr17	-	156	1	Intergenic	novelGene_4762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAGACTGAGTGAGCA	6178	False	NA	NA	False	NA	NA	NA	24701461	24701305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_24701300_24701500
Isoform_75992_10	chr17	+	488	1	FSM	ENSMUSG00000093565.2	ENSMUST00000176215.2	477	1	-15	4	4	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGTGGTTTCAGACG	4768	False	NA	9	True	AATAAA	-12	NA	24747225	24747713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_24747200_24747700
Isoform_75993_7	chr17	-	176	1	Intergenic	novelGene_4763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATACGTGAG	NA	False	NA	NA	False	NA	NA	NA	24753444	24753268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_24753300_24753400
Isoform_75994_76	chr17	+	174	1	Intergenic	novelGene_4764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATTGTTAAAAAAA	6046	False	NA	NA	False	NA	NA	NA	24759033	24759207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24759000_24759200
Isoform_75996_6	chr17	+	696	1	Intergenic	novelGene_4765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAGAAGAAGAA	8990	False	NA	NA	False	NA	NA	NA	24859737	24860433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24859700_24860400
Isoform_75999_22	chr17	-	169	1	Intergenic	novelGene_4766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	24922546	24922377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_24922400_24922500
Isoform_76_43	ERCC-00051	+	257	1	FSM	ERCC-00051A	DQ516740	258	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00051_+_0_300
Isoform_76003_11	chr17	-	369	1	FSM	ENSMUSG00000089255.3	ENSMUST00000158630.3	128	1	-98	-143	-98	143	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATCGTATGTTGGTGT	4365	False	NA	-10	True	AATAAA	-13	NA	24938875	24938506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_24938500_24938900
Isoform_7601_49	chr10	+	1456	5	NIC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	318.019653480724	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGCTCCTGCTGTGT	NA	False	NA	14	True	AATAAA	-18	NA	81220296	81224185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81220461_81221552_81221882_81222246_81222324_81223073_81223315_81223540
Isoform_76011_3	chr17	+	254	1	Intergenic	novelGene_4767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGACCTTTTTAGTGGTA	NA	False	NA	NA	False	AGTAAA	-8	NA	24959548	24959802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_24959500_24959800
Isoform_76014_11	chr17	+	176	1	Intergenic	novelGene_4768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACTTCAAGTCT	NA	False	NA	NA	False	NA	NA	NA	25006531	25006707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_25006500_25006700
Isoform_76016_37	chr17	-	1211	1	FSM	ENSMUSG00000045316.6	ENSMUST00000049642.6	1473	1	261	1	261	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCACTTTCTTTTCCCAG	NA	False	NA	2	True	AATAAA	-23	NA	25069077	25067866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25067900_25069100
Isoform_76017_11	chr17	-	1405	1	FSM	ENSMUSG00000045316.6	ENSMUST00000049642.6	1473	1	64	4	64	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGCACTTTCTTTTCC	NA	False	NA	-1	True	AATAAA	-20	NA	25069274	25067869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_-_25067900_25069300
Isoform_76019_11	chr17	+	3768	1	Genic_Genomic	ENSMUSG00000046070.10	novel	NA	NA	NA	NA	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGACCTAGAGTGTG	7760	False	NA	9	True	ATTAAA	-16	NA	25097216	25100984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_+_25097200_25101000
Isoform_76022_8	chr17	+	1133	1	NIC	ENSMUSG00000038880.14	novel	918	3	NA	NA	22	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114130	25115263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_25114100_25115300
Isoform_76024_7	chr17	-	187	1	Intergenic	novelGene_4655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	6057334	6057147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6057100_6057300
Isoform_76027_4	chr17	+	1387	1	Antisense	novelGene_ENSMUSG00000024165.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAACCCAACATCCTTCAGC	1451	False	NA	NA	False	ACTAAA	-33	NA	25161127	25162514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_25161100_25162500
Isoform_76040_11	chr17	-	178	1	Intergenic	novelGene_4769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAGACATATCTTTG	7899	False	NA	NA	False	NA	NA	NA	25240242	25240064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_25240100_25240200
Isoform_76041_6	chr17	-	200	1	Intergenic	novelGene_4770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTACCTTTAGTTAAAT	7330	False	NA	NA	False	NA	NA	NA	25240811	25240611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_25240600_25240800
Isoform_76043_4	chr17	-	513	1	Genic_Genomic	ENSMUSG00000024170.16	novel	NA	NA	NA	NA	236	88	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	25320164	25319651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr17_-_25319700_25320200
Isoform_76046_24	chr17	-	1780	1	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	11	-33	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	25334917	25333137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_-_25333100_25334900
Isoform_76047_13	chr17	-	177	1	Intergenic	novelGene_4771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTCAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	25349352	25349175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_25349200_25349400
Isoform_76049_3	chr17	-	645	1	Intergenic	novelGene_4772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATACAAAAAAAAAAAAAA	4770	False	NA	NA	False	NA	NA	NA	25403436	25402791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_25402800_25403400
Isoform_76051_70	chr17	+	938	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	44	2127	44	-2127	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAATTTTCTCACCTCCC	NA	False	NA	14	True	AATACA	-19	NA	25403571	25404509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25403600_25404500
Isoform_76053_16	chr17	+	2030	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	34	1045	34	-1045	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGACGCTTACAAAATTAG	NA	False	NA	21	True	AATAAA	-34	NA	25403561	25405591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25403600_25405600
Isoform_76055_7	chr17	+	2402	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	10	697	10	-697	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTGTCACAGGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	25403537	25405939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr17_+_25403500_25405900
Isoform_76068_29	chr17	+	173	1	Intergenic	novelGene_4773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACCAAA	822	False	NA	NA	False	NA	NA	NA	25575244	25575417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_25575200_25575400
Isoform_76072_44	chr17	-	180	1	Intergenic	novelGene_4775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATTGTTGTGCACT	NA	False	NA	NA	False	NA	NA	NA	26024849	26024669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26024700_26024800
Isoform_76074_9	chr17	+	1153	1	Antisense	novelGene_ENSMUSG00000039615.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAAGTCCACAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	26052086	26053239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr17_+_26052100_26053200
Isoform_76076_281	chr17	-	177	1	Intergenic	novelGene_4656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAATCGGTGAAT	5699	False	NA	NA	False	NA	NA	NA	6126910	6126733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_6126700_6126900
Isoform_76077_20	chr17	+	177	1	Intergenic	novelGene_4776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTCTCCTCTC	1860	False	NA	NA	False	NA	NA	NA	26089139	26089316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_26089100_26089300
Isoform_76078_18	chr17	+	1661	1	NIC	ENSMUSG00000025731.17	novel	1243	6	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGCTTGCTGGGAAT	7194	False	NA	30	True	AATAAA	-31	NA	26094473	26096134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr17_+_26094500_26096100
Isoform_7608_2783	chr10	+	1219	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-6	198	0	107	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	2783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	51	False	NA	18	True	AATAAA	-18	NA	81395321	81401998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
Isoform_76083_3	chr17	-	178	1	Intergenic	novelGene_4777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGCGATTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	26213785	26213607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_-_26213600_26213800
Isoform_76086_5	chr18	-	1217	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	44	-5	3	5	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTGTGCATTTTAATG	-9	True	NA	-1	True	AATAAA	-17	NA	3337530	3294476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
Isoform_76087_5	chr18	-	1318	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	-59	-3	-44	3	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTTGTGCATTTTAA	-3	True	NA	-3	True	AATAAA	-15	NA	3337633	3294478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
Isoform_7609_845	chr10	+	1442	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-31	0	-25	0	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	26	False	NA	14	True	AATAAA	-16	NA	81395296	81402196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
Isoform_76090_4	chr18	-	1161	4	FSM	ENSMUSG00000063889.17	ENSMUST00000149803.8	1422	4	-30	291	-30	7	multi-exon	FALSE	canonical	3	52	junction_2	16.5797734872612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGTA	11	True	NA	1	True	AATAAA	-19	NA	3337619	3294474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_3295183_3295321_3295417_3325360_3325479_3337379
Isoform_76091_9	chr18	-	2495	8	FSM	ENSMUSG00000024235.12	ENSMUST00000025078.10	2569	8	62	12	4	1	multi-exon	FALSE	canonical	2	4	junction_5	7.63450812336422	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTCTTAATTTTTG	0	True	NA	NA	False	AATAAA	-14	NA	4352953	4331338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_4332437_4333817_4334065_4334616_4334770_4339496_4339604_4340546_4340809_4343021_4343190_4348980_4349339_4352851
Isoform_76093_11	chr18	-	2868	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	2	341	2	-246	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAGAAAATTGTTATTC	364	False	NA	NA	False	AATAAA	-29	NA	5334437	5210369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
Isoform_76095_3	chr18	-	3152	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	61	-2	35	2	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTTTTCTTAAAT	9	True	NA	NA	False	CATAAA	-19	NA	5334378	5210026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
Isoform_76097_8	chr18	-	3193	5	FSM	ENSMUSG00000050945.9	ENSMUST00000234241.2	3112	5	12	-93	12	-2	multi-exon	FALSE	canonical	3	8	junction_4	6.20483682299543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTTTTGTTGTTTTCTT	6	True	NA	NA	False	CATAAA	-15	NA	5334795	5210030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334717
Isoform_76101_25	chr18	-	4144	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	145	-24	2	4	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCGTTTTAGTTCTTA	-6	True	NA	1	True	AATAAA	-38	NA	6135953	6025192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_76103_9	chr18	-	4927	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	107	-769	-21	-21	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-44	True	NA	-14	True	ATTAAA	-30	NA	6135991	6024447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_76105_3	chr18	-	4128	19	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	49.2688830754887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGAGTTTTTTTCCATTG	-26	True	NA	-21	True	AATAAA	-16	NA	6135973	6025214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135817
Isoform_76106_3	chr18	-	3325	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	49.2946735839685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTTAGAGTTTTTTTC	-6	True	NA	-26	True	AATAAA	-11	NA	6135953	6025219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
Isoform_76107_22	chr18	-	3956	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_14	38.8663756441135	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	17	True	NA	-23	True	AATAAA	-14	NA	6135930	6025216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_76109_20	chr18	-	4745	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	2	-24	combination_of_known_junctions	FALSE	canonical	3	59	junction_14	38.8663756441135	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTAATATTTTCCTT	-6	True	NA	-17	True	ATTAAA	-27	NA	6135953	6024450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_76111_3	chr18	-	3958	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	2	-24	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	50.5179396078484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTAATATTTTCCTT	-11	True	NA	-17	True	ATTAAA	-27	NA	6135958	6024450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6135803
Isoform_76112_7	chr18	-	3204	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	50.5179396078484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTGCGTTTTAGTTCT	-1	True	NA	-1	True	AATAAA	-36	NA	6135948	6025194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6135803
Isoform_76115_24	chr18	-	4064	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-46	413	2	-1	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAATGTGCGTTTTAGT	-6	True	NA	-4	True	AATAAA	-33	NA	6135953	6025197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_76117_6	chr18	-	4862	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-98	-333	-35	-25	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGTAATATTTTCCT	57	False	NA	-18	True	ATTAAA	-26	NA	6136005	6024451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_76118_21	chr18	-	4812	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-47	-334	1	-24	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTAATATTTTCCTT	-7	True	NA	-17	True	ATTAAA	-27	NA	6135954	6024450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_76121_3	chr18	-	3308	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-35	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	48.531593375404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAGTTTTTTTCCATTGG	57	False	NA	-20	True	AATAAA	-17	NA	6136005	6025213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
Isoform_76122_22	chr18	-	3944	17	FSM	ENSMUSG00000041225.17	ENSMUST00000182383.8	2500	17	-86	-1358	-4	-1	multi-exon	FALSE	canonical	3	59	junction_13	36.3438440454501	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAATGTGCGTTTTAGT	-27	True	NA	-4	True	AATAAA	-33	NA	6135974	6025197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_76123_13	chr18	-	4722	17	FSM	ENSMUSG00000041225.17	ENSMUST00000182383.8	2500	17	-117	-2105	-35	-24	multi-exon	FALSE	canonical	3	59	junction_13	36.3438440454501	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTAATATTTTCCTT	57	False	NA	-17	True	ATTAAA	-27	NA	6136005	6024450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_76126_4	chr18	-	3890	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	49.8193219920745	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-6	True	NA	-23	True	AATAAA	-14	NA	6135953	6025216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135817
Isoform_76127_6	chr18	-	3073	15	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	49.5805364214299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTTAGAGTTTTTTT	29	True	NA	-27	True	AATAAA	-10	NA	6135918	6025220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6135803
Isoform_76128_4	chr18	-	3884	15	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	1	-24	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	49.5805364214299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTAATATTTTCCTT	-12	True	NA	-17	True	ATTAAA	-27	NA	6135959	6024450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6135803
Isoform_76129_6	chr18	-	3661	16	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	45.5037971553535	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAGTTTTTTTCCATTGG	-21	True	NA	-20	True	AATAAA	-17	NA	6135968	6025213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
Isoform_76130_4	chr18	-	4421	16	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	5	-24	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	45.5037971553535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTAATATTTTCCTT	-18	True	NA	-17	True	ATTAAA	-27	NA	6135965	6024450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
Isoform_7614_45	chr10	+	1288	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-75	198	-69	107	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	159	False	NA	18	True	AATAAA	-18	NA	81395252	81401998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
Isoform_76155_809	chr18	-	6009	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	4	19	4	-19	multi-exon	TRUE	canonical	0	0	junction_8	215.348105169282	809	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACACATTTGAACCTTAC	-1	True	NA	-19	True	AATAAA	-23	NA	6241519	6201020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
Isoform_7616_128	chr10	+	1216	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	0	107	combination_of_known_junctions	FALSE	canonical	3	368	junction_6	1051.93209804098	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	51	False	NA	18	True	AATAAA	-18	NA	81395321	81401998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401308
Isoform_76171_5	chr18	-	4056	15	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	19.9720467919847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACGTGCAGTGGTCTT	-2	True	NA	-5	True	AATAAA	-23	NA	6490840	6435956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6441801_6441913_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
Isoform_76172_69	chr18	-	3961	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	3	1	3	-1	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGCAGTGGTCTTTGC	-15	True	NA	-2	True	AATAAA	-26	NA	6490853	6435953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
Isoform_76178_3	chr18	-	4147	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	-182	0	-182	0	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTGGTCTTTGCC	NA	False	NA	-1	True	AATAAA	-27	NA	6491038	6435952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
Isoform_76179_9	chr18	-	3848	14	FSM	ENSMUSG00000024240.14	ENSMUST00000115870.9	3817	14	-37	6	-37	-4	multi-exon	FALSE	canonical	1	5	junction_13	15.1118120655772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACGTGCAGTGGTCTT	NA	False	NA	-5	True	AATAAA	-23	NA	6516145	6435956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6515864
Isoform_76181_3	chr18	-	560	2	FSM	ENSMUSG00000024240.14	ENSMUST00000050542.6	565	2	6	-1	6	1	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTATTTAACCTTTTAA	-12	True	NA	NA	False	AATAAA	-16	NA	6490850	6489158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6489331_6490462
Isoform_76184_3	chr18	-	4885	19	NNC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-34	-149	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	39.0932724470245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGCTTGAAAGTTGT	1585	False	NA	NA	False	AATAAA	-15	NA	7609016	7348112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7607884_7608010_7608913_7608951_7608986
Isoform_76185_143	chr18	-	4834	17	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-9	-155	combination_of_known_junctions	FALSE	canonical	3	86	junction_16	10.4634781502137	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATATCTGCTTGAA	-31	True	NA	NA	False	AATAAA	-9	NA	7626875	7348118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
Isoform_76187_17	chr18	-	4993	17	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	86	junction_16	10.4634781502137	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGCTTTCAAGATTAT	-32	True	NA	NA	False	ATTAAA	-18	NA	7626876	7347960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
Isoform_76188_42	chr18	-	4822	17	FSM	ENSMUSG00000057440.9	ENSMUST00000115869.4	4981	17	0	159	0	-154	multi-exon	FALSE	canonical	3	19	junction_16	22.8061635035356	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATATATCTGCTTGAAA	-22	True	NA	NA	False	AATAAA	-10	NA	7626866	7348117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626732
Isoform_7619_77	chr10	+	1251	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-35	107	combination_of_known_junctions	FALSE	canonical	3	368	junction_6	1051.93209804098	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	16	False	NA	18	True	AATAAA	-18	NA	81395286	81401998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401308
Isoform_76190_6	chr18	-	4698	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-5	-155	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	26.6329787210435	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATATCTGCTTGAA	-27	True	NA	NA	False	AATAAA	-9	NA	7626871	7348118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
Isoform_76191_5	chr18	-	4745	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	0	-147	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	26.2461849079485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-15	True	NA	NA	False	AATAAA	-17	NA	7626859	7348110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
Isoform_76195_48	chr18	-	2140	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	-24	3641	-20	6	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTCCATTTTCTCTA	-6	False	NA	-13	True	AATAAA	-17	NA	9450174	9315944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
Isoform_76200_7	chr18	-	3694	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	-18	2081	-14	916	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGTATTCGTTGTATG	0	True	NA	-1	True	ATTAAA	-17	NA	9450168	9314384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
Isoform_76203_6	chr18	-	5612	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	142	3	-38	-3	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATGACTTCATCTCAT	-13	True	NA	-3	True	AATAAA	-21	NA	9450008	9312306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
Isoform_76205_4	chr18	-	922	3	ISM	ENSMUSG00000024286.9	ENSMUST00000234844.2	1354	8	-472	61517	-4	8778	5prime_fragment	FALSE	canonical	3	51	junction_2	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACAGAGGCTTT	10	False	9450168	NA	False	NA	NA	NA	9450158	9377622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_9377829_9386734_9386810_9449517
Isoform_76217_726	chr18	-	2135	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	85	2506	11	22	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTGTCTCTAATGTAC	25	True	NA	-43	True	AATAAA	-37	NA	10030056	9995571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
Isoform_76218_537	chr18	-	2298	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	60	2368	0	160	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTTTGACATTTCTTT	0	True	NA	-2	True	AATAAA	-22	NA	10030081	9995433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
Isoform_76219_322	chr18	-	4112	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	64	550	4	-550	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTGTTTCAGTGTC	4	True	NA	NA	False	AATAAA	-23	NA	10030077	9993615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
Isoform_76222_27	chr18	-	2385	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	-24	2365	-24	163	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACATTTCTTTTTA	NA	False	NA	1	True	AATAAA	-25	NA	10030165	9995430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
Isoform_76240_7	chr18	-	6472	33	NIC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-37	-2	combination_of_known_junctions	TRUE	canonical	3	26	junction_22	39.4484310326469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGACTTGGGCTCTAAA	-2	True	NA	NA	False	ATTAAA	-19	NA	10182082	10064402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116860_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
Isoform_76243_55	chr18	-	6294	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-37	183	-37	-183	multi-exon	FALSE	canonical	3	139	junction_22	28.5588755906111	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCTGTGCTCATTTAA	-2	True	NA	1	True	AATAAA	-23	NA	10182082	10064583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
Isoform_76244_26	chr18	-	6596	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-160	4	-160	-4	multi-exon	TRUE	canonical	3	139	junction_22	28.5588755906111	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGACTTGGGCTCTA	-2	True	NA	NA	False	ATTAAA	-17	NA	10182205	10064404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
Isoform_76246_43	chr18	-	6416	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-159	183	-159	-183	multi-exon	FALSE	canonical	3	139	junction_22	28.5588755906111	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCTGTGCTCATTTAA	-1	True	NA	1	True	AATAAA	-23	NA	10182204	10064583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
Isoform_76264_3	chr18	-	4304	12	FSM	ENSMUSG00000024293.17	ENSMUST00000127099.9	4572	12	261	7	-16	2	multi-exon	FALSE	canonical	1	1	junction_5	52.6252932305684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACTTGATACAATGT	-9	True	NA	-27	True	AATAAA	-35	NA	10610091	10566608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10577637_10577760_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
Isoform_76265_106	chr18	-	4196	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	244	105	1	-1	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTACTTGATACAA	-26	True	NA	-30	True	AATAAA	-32	NA	10610108	10566611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
Isoform_76266_10	chr18	-	4547	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	-2	0	-2	0	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCACTAGCTTGCAATT	0	True	NA	-6	True	ATTAAA	-21	NA	10610354	10566506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
Isoform_76268_14	chr18	-	4507	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	-65	103	-65	1	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTACTTGATACAATG	NA	False	NA	-28	True	AATAAA	-34	NA	10610417	10566609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
Isoform_76271_30	chr18	-	4298	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	247	0	4	0	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCACTAGCTTGCAATT	-23	True	NA	-6	True	ATTAAA	-21	NA	10610105	10566506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
Isoform_76276_3	chr18	-	4062	10	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	44.4191594742073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAATGTACTTGATACA	-25	True	NA	-31	True	AATAAA	-31	NA	10610107	10566612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
Isoform_76281_8	chr18	-	1925	9	FSM	ENSMUSG00000002475.17	ENSMUST00000117828.9	1962	9	36	1	-22	-1	multi-exon	FALSE	canonical	2	2	junction_1	3.63145976158349	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTTTGTGAGTTT	-1	True	NA	NA	False	AATAAA	-14	NA	10706735	10644411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_10645236_10647725_10647892_10647969_10648019_10652187_10652362_10658779_10658893_10682068_10682115_10704547_10704731_10706000_10706165_10706529
Isoform_76282_3	chr18	-	1904	2	NNC	ENSMUSG00000049411.16	novel	670	10	NA	NA	100117	1584	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGCTGGCCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	12107571	12095922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_12097716_12107460
Isoform_76286_14	chr18	-	2550	15	FSM	ENSMUSG00000049411.16	ENSMUST00000209859.2	1426	15	11	-1135	-5	0	multi-exon	TRUE	canonical	3	13	junction_4	4.03871569806491	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCTGTATGTTTATA	NA	False	NA	NA	False	TTTAAA	-14	NA	12254576	12114997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
Isoform_76288_42	chr18	-	5194	25	FSM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	29	1	-13	-1	multi-exon	FALSE	canonical	3	21	junction_11	10.5137971521024	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGGTCTTTTATTGC	NA	False	NA	-27	True	AATAAA	-15	NA	12369428	12322750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
Isoform_76292_6	chr18	-	2618	15	NIC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	-41	0	combination_of_known_junctions	TRUE	canonical	3	45	junction_14	115.127701944849	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996389	12888384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
Isoform_76293_18	chr18	-	3834	29	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	126.821317938561	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	13074891	12888393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
Isoform_76295_6	chr18	-	2496	14	NIC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_13	123.239892104453	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	12996440	12888394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996128
Isoform_76304_14	chr18	-	2695	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	312	23	62	1	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12995418	12888393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
Isoform_76308_16	chr18	-	2570	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	446	14	13	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12995284	12888384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
Isoform_76309_8	chr18	-	3716	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	-710	24	-3	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	12996440	12888394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
Isoform_7631_4	chr10	+	3495	20	NIC	ENSMUSG00000054708.18	novel	4635	18	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	28.2233866994502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGTCGCAAGAGTTG	7967	False	NA	NA	False	AATAAA	-26	NA	81469533	81483441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_81469590_81470500_81470588_81470698_81470830_81470903_81470993_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475689_81475771_81475861_81475970_81476601_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81482138_81482268_81482626_81482693_81482933
Isoform_76312_22	chr18	-	2752	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	57	9	-3	1	multi-exon	FALSE	canonical	3	45	junction_13	91.3749671156418	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12996440	12888393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
Isoform_76313_29	chr18	-	2712	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	106	0	-43	0	multi-exon	FALSE	canonical	3	45	junction_13	91.3749671156418	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996391	12888384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
Isoform_76316_152	chr18	-	3926	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	7	23	7	1	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	13074891	12888393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
Isoform_7632_30	chr10	+	916	5	FSM	ENSMUSG00000054708.18	ENSMUST00000132458.2	829	5	43	-130	43	-3	multi-exon	FALSE	canonical	3	22	junction_1	34.9070193514141	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCAAGTCGCAAGAG	NA	False	NA	NA	False	AATAAA	-23	NA	81479679	81483438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
Isoform_76320_26	chr18	-	2475	14	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-3	1	intron_retention	FALSE	canonical	3	33	junction_13	94.3034884243106	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12996440	12888393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
Isoform_76322_7	chr18	-	2468	14	NNC	ENSMUSG00000044252.19	novel	3030	14	NA	NA	2614	1	intron_retention	FALSE	canonical	2	6	junction_13	100.952387863708	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12999550	12888393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12999522
Isoform_76323_13	chr18	-	2417	13	FSM	ENSMUSG00000044252.19	ENSMUST00000118313.8	2893	13	464	12	-9	-2	multi-exon	FALSE	canonical	3	43	junction_12	94.3352473304061	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAAAAAGTGTGAAT	NA	False	NA	-34	True	AATAAA	-13	NA	12995306	12888396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
Isoform_76326_9	chr18	-	2538	13	FSM	ENSMUSG00000044252.19	ENSMUST00000118313.8	2893	13	355	0	65	0	multi-exon	FALSE	canonical	3	43	junction_12	94.3352473304061	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12995415	12888384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
Isoform_76327_10	chr18	-	2523	13	NIC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-26	1	intron_retention	FALSE	canonical	3	22	junction_12	99.8294030945904	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12996374	12888393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996128
Isoform_76329_7	chr18	-	2598	13	NIC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-3	0	intron_retention	TRUE	canonical	3	22	junction_12	99.8294030945904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996440	12888384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996128
Isoform_7633_45	chr10	+	752	4	ISM	ENSMUSG00000054708.18	ENSMUST00000154707.8	4635	18	10139	3	39	-3	3prime_fragment	FALSE	canonical	3	46	junction_1	24.7521042876493	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCAAGTCGCAAGAG	NA	False	NA	NA	False	AATAAA	-23	NA	81479675	81483438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_81479728_81482138_81482268_81482626_81482693_81482933
Isoform_76330_6	chr18	-	2451	13	NIC	ENSMUSG00000044252.19	novel	2687	14	NA	NA	-25	1	intron_retention	FALSE	canonical	2	4	junction_12	104.565337097062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12996373	12888393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996199
Isoform_7634_5	chr10	+	989	4	ISM	ENSMUSG00000054708.18	ENSMUST00000154707.8	4635	18	9902	3	-198	-3	3prime_fragment	FALSE	canonical	3	46	junction_1	24.7521042876493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCAAGTCGCAAGAG	NA	False	NA	NA	False	AATAAA	-23	NA	81479438	81483438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_81479728_81482138_81482268_81482626_81482693_81482933
Isoform_76345_8	chr18	-	3236	4	FSM	ENSMUSG00000044252.19	ENSMUST00000141651.2	681	4	-1	-2554	-1	2554	multi-exon	FALSE	canonical	3	113	junction_2	8.64098759787715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGAGTGCACGTCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	13074850	13058527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_13061393_13062064_13062151_13066636_13066760_13074688
Isoform_76348_6	chr18	-	4897	8	FSM	ENSMUSG00000024420.10	ENSMUST00000025288.9	6206	8	104	1205	-35	-2	multi-exon	FALSE	canonical	0	0	junction_3	3.11022015101103	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGTGAGTGTATTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	14105740	13821274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_13822082_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14104420_14104462_14105557
Isoform_7635_5	chr10	+	1282	4	ISM	ENSMUSG00000054708.18	ENSMUST00000154707.8	4635	18	9608	4	-492	-4	3prime_fragment	FALSE	canonical	3	46	junction_1	24.7521042876493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACCAAGTCGCAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	81479144	81483437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_81479728_81482138_81482268_81482626_81482693_81482933
Isoform_76352_231	chr18	-	2942	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	149	7	0	-1	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTCATTTGTTTCTTT	NA	False	NA	-20	True	AATAAA	-16	NA	14815822	14758686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
Isoform_7636_26	chr10	+	2147	4	FSM	ENSMUSG00000096856.8	ENSMUST00000189672.7	4735	4	2	2586	2	544	multi-exon	FALSE	canonical	2	7	junction_1	17.4610678049451	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACTGCCATCTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	81484894	81500609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81485001_81497831_81497959_81498158_81498220_81498756
Isoform_76367_813	chr18	-	2847	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	63	1	0	-1	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTCATTTGTTTCT	NA	False	NA	-22	True	AATAAA	-14	NA	14815822	14758688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
Isoform_76379_43	chr18	-	2627	9	FSM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	1	-25	0	-1	multi-exon	FALSE	canonical	3	40	junction_5	300.413048984228	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTCATTTGTTTCTTT	NA	False	NA	-20	True	AATAAA	-16	NA	14815822	14758686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
Isoform_7638_17	chr10	+	2377	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	0	7	0	-7	multi-exon	FALSE	canonical	3	15	junction_1	8.5764535535124	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATATTTATACTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	81540658	81557803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
Isoform_76380_56	chr18	-	2742	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	296.915812984085	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTCATTTGTTTCT	NA	False	NA	-22	True	AATAAA	-14	NA	14815822	14758688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
Isoform_76384_10	chr18	-	2733	5	FSM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	42	2	42	-2	multi-exon	FALSE	canonical	2	9	junction_4	2.1650635094611	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACACCTGTATTCATA	NA	False	NA	-5	True	AATAAA	-20	NA	15196633	15102458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15194824
Isoform_76385_10	chr18	-	4140	16	FSM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	703	0	-81	0	multi-exon	FALSE	canonical	2	10	junction_5	4.09009644004746	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	NA	False	NA	-1	True	AATAAA	-20	NA	16941600	16721933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
Isoform_76386_16	chr18	-	4078	16	FSM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	760	5	-24	-5	multi-exon	FALSE	canonical	2	10	junction_5	4.09009644004746	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGACTGGTTTGAACT	NA	False	NA	-6	True	AATAAA	-15	NA	16941543	16721938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
Isoform_7639_8	chr10	+	2408	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	-32	8	-32	-8	multi-exon	FALSE	canonical	3	15	junction_1	8.5764535535124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGATATTTATACTGC	NA	False	NA	NA	False	AATAAA	-15	NA	81540626	81557802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
Isoform_76390_9	chr18	-	4409	17	FSM	ENSMUSG00000024331.12	ENSMUST00000039247.11	4630	17	220	1	144	-1	multi-exon	FALSE	canonical	2	2	junction_1	4.14907745770069	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTGCAGGTGGTGAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	20192391	20163690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
Isoform_76391_7	chr18	-	4290	16	FSM	ENSMUSG00000024331.12	ENSMUST00000075214.9	4508	16	218	0	218	0	multi-exon	FALSE	canonical	2	8	junction_1	3.07245829914744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGCAGGTGGTGAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	20192317	20163689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_20165461_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
Isoform_76392_3	chr18	-	4376	16	FSM	ENSMUSG00000024331.12	ENSMUST00000075214.9	4508	16	133	-1	133	1	multi-exon	FALSE	canonical	2	8	junction_1	3.07245829914744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAGGTGGTGAAGATA	NA	False	NA	NA	False	AATAAA	-18	NA	20192402	20163688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_20165461_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
Isoform_76399_163	chr18	-	5738	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	63	7	63	-7	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTGTGTGGTGATGT	NA	False	NA	-10	True	AATATA	-9	NA	20879398	20817662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
Isoform_7640_5	chr10	+	1948	5	NNC	ENSMUSG00000094076.8	novel	4725	4	NA	NA	-10	544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	20.8851023459307	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACTGCCATCTATTT	4183	False	NA	NA	False	AATAAA	-20	NA	81648009	81659738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_81648118_81656960_81657088_81657287_81657349_81657885_81659472_81659672
Isoform_76402_25	chr18	-	2851	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	19	2938	19	-2938	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTGTACAGGACTTCTT	NA	False	NA	NA	False	AAGAAA	-22	NA	20879442	20820593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
Isoform_7641_18	chr10	+	1844	4	NNC	ENSMUSG00000094076.8	novel	4725	4	NA	NA	-16	31424	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	6.68331255192114	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGTAATCAATGTGAT	4177	False	NA	NA	False	NA	NA	NA	81648003	81693748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_81648118_81656960_81657088_81691636_81691698_81692206
Isoform_7642_4	chr10	+	1823	4	NNC	ENSMUSG00000094076.8	novel	4725	4	NA	NA	-15	31425	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTAATCAATGTGATA	4178	False	NA	NA	False	NA	NA	NA	81648004	81693749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_81648118_81656960_81657088_81691636_81691698_81692227
Isoform_76424_30	chr18	-	5384	29	FSM	ENSMUSG00000033382.16	ENSMUST00000225661.3	5194	29	-279	89	-279	-89	multi-exon	FALSE	canonical	3	24	junction_23	36.8553951689739	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTATTAGATGCCTT	NA	False	NA	-111	True	AATAAA	-18	NA	21029429	20950368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_76425_8	chr18	-	5473	29	FSM	ENSMUSG00000033382.16	ENSMUST00000225661.3	5194	29	-279	0	-279	0	multi-exon	FALSE	canonical	3	24	junction_23	36.8553951689739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCCTAGTTTCCTG	NA	False	NA	-22	True	AATAAA	-19	NA	21029429	20950279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_76426_74	chr18	-	5424	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-321	-88	at_least_one_novel_splicesite	FALSE	canonical	3	164	junction_9	17.2092464467595	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTATTAGATGCCTTT	NA	False	NA	-110	True	AATAAA	-19	NA	21029471	20950367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_76428_123	chr18	-	5371	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-268	-88	at_least_one_novel_splicesite	FALSE	canonical	3	164	junction_9	17.2092464467595	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTATTAGATGCCTTT	NA	False	NA	-110	True	AATAAA	-19	NA	21029418	20950367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_76429_14	chr18	-	5507	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-321	-5	at_least_one_novel_splicesite	FALSE	canonical	3	164	junction_9	17.2092464467595	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGGCACTAGCCTAGTT	NA	False	NA	-27	True	AATAAA	-14	NA	21029471	20950284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_7643_25	chr10	+	2362	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	2	-4	2	1	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTATCTATATTATCAA	NA	False	NA	NA	False	AATAAA	-15	NA	81883958	81897419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
Isoform_76433_42	chr18	-	5339	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-279	-89	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_23	35.6899917372375	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTATTAGATGCCTT	NA	False	NA	-111	True	AATAAA	-18	NA	21029429	20950368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_76434_11	chr18	-	5439	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-284	6	at_least_one_novel_splicesite	TRUE	canonical	3	31	junction_23	35.6899917372375	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGTTTCCTGTGAAAG	NA	False	NA	-16	True	AATAAA	-25	NA	21029434	20950273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_76437_40	chr18	-	2995	16	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-279	1	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_10	12.8571640211466	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTTCTATGGTCATT	NA	False	NA	-1	True	AATAAA	-29	NA	21029429	20979200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_76438_42	chr18	-	3639	6	FSM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	-1	1285	-1	1	multi-exon	FALSE	canonical	1	3	junction_2	4.12795348811006	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	21433196	21261542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_21263080_21264389_21264557_21280788_21281962_21301792_21301924_21369057_21369199_21432706
Isoform_7644_4	chr10	+	5506	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	2	-3148	2	-16	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	81883958	81900563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
Isoform_76446_59	chr18	-	3568	4	NIC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	-16	1653	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTAGCTTGGAATTGCC	NA	False	NA	NA	False	AATAAA	-24	NA	24153393	24145328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
Isoform_76449_86	chr18	-	3185	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-17	-1655	-17	1655	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCTTGGAATTGCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	24153394	24145326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
Isoform_7645_10	chr10	+	2308	3	FSM	ENSMUSG00000061371.8	ENSMUST00000209622.2	2284	3	-24	0	-4	0	multi-exon	FALSE	canonical	1	2	junction_2	19	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATCTATATTATCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	81883952	81897420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81884064_81894203_81894331_81895350
Isoform_76456_300	chr18	-	3105	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	55	2572	55	1651	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAGTAGCTTGGAATTG	NA	False	NA	NA	False	AATAAA	-22	NA	24153812	24145330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
Isoform_7646_11	chr10	+	2765	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	-37	-2	-37	2	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATACTGCCATCCATTT	NA	False	NA	NA	False	AATAAA	-21	NA	81919149	81947052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
Isoform_76461_15	chr18	-	5561	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	20	151	20	-151	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATTTGGCTTCTGTCC	NA	False	NA	0	True	NA	NA	NA	24153847	24142909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
Isoform_76463_11	chr18	-	5699	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	18	15	18	-15	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCTCTGTTAACCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	24153849	24142773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
Isoform_76465_835	chr18	-	2394	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	99	5	-19	-5	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGTTGGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	24254911	24237818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
Isoform_76466_50	chr18	-	2451	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	42	5	42	-5	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGTTGGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	24254968	24237818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
Isoform_7647_7	chr10	+	4026	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	-20	-1280	-20	1280	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCCTGGAGTGGAGT	NA	False	NA	NA	False	AATAAA	-24	NA	81919166	81948330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
Isoform_76477_219	chr18	-	4306	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-8	1	-8	-1	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	24663269	24618017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
Isoform_7648_11	chr10	+	747	5	NNC	ENSMUSG00000112160.2	novel	2726	4	NA	NA	-30	11707	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	9.08295106229247	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCATTGTTTCCTTGCCTT	NA	False	NA	7	True	NA	NA	NA	81919156	81958757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572_81944605_81958320
Isoform_76484_29	chr18	-	2341	6	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-8	20468	-8	-1	5prime_fragment	FALSE	canonical	3	215	junction_1	43.046951111548	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTCTCATGTTTTTG	NA	False	NA	-2	True	AATAAA	-17	NA	24663269	24638484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
Isoform_76488_11	chr18	-	3104	5	FSM	ENSMUSG00000040446.5	ENSMUST00000234403.2	2950	5	-155	1	-9	-1	multi-exon	FALSE	canonical	3	215	junction_1	46.5886252211846	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTCTCATGTTTTTG	NA	False	NA	-2	True	AATAAA	-17	NA	24663270	24638484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_24640067_24640161_24641149_24641226_24641334_24642849_24642980_24662972
Isoform_7649_181	chr10	+	3382	4	FSM	ENSMUSG00000073427.5	ENSMUST00000210381.2	3330	4	-46	-6	11	6	multi-exon	FALSE	canonical	3	117	junction_3	14.0554457615387	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATGTTGTCATCCAT	NA	False	NA	9	True	AATAAA	-21	NA	82190103	82215476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82212394
Isoform_76491_86	chr18	-	3872	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	10	0	10	0	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTCTCTTTCTTCT	NA	False	NA	0	True	ATTAAA	-18	NA	24736864	24712937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
Isoform_76497_19	chr18	-	2614	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	62	1483	62	-1483	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGTGAAAATGTTTAAC	NA	False	NA	NA	False	AATAAA	-41	NA	25302002	25270576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_76498_172	chr18	-	1291	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	293	2575	-20	-2575	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCAGTATCGACTAGTT	NA	False	NA	-6	True	AATAAA	-20	NA	25301771	25271668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_76499_42	chr18	-	1492	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	92	2575	92	-2575	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCAGTATCGACTAGTT	NA	False	NA	-6	True	AATAAA	-20	NA	25301972	25271668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_7650_3	chr10	+	2439	5	FSM	ENSMUSG00000073427.5	ENSMUST00000211099.2	490	5	-2	-1947	-2	1947	multi-exon	FALSE	canonical	3	10	junction_3	62.9816441512922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATGACAAGTATCCCA	NA	False	NA	NA	False	NA	NA	NA	82190086	82238627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82219596_82219679_82236587
Isoform_76500_14	chr18	-	3858	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	293	8	-20	-8	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAATCAGGTATCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	25301771	25269101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_76502_5	chr18	-	4082	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	69	8	69	-8	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAATCAGGTATCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	25301995	25269101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_76503_4	chr18	-	1944	8	NNC	ENSMUSG00000024269.12	novel	4159	7	NA	NA	30	-2578	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	116.647734129519	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCATCAGTATCGACTA	NA	False	NA	-9	True	AATAAA	-17	NA	25301721	25271671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_25272197_25273502_25273664_25274577_25274695_25281344_25282051_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_76506_16	chr18	-	2305	2	ISM	ENSMUSG00000024268.17	ENSMUST00000115816.3	3995	13	266966	-1	-120	1	3prime_fragment	FALSE	canonical	3	39	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCAAAAACCTC	NA	False	NA	NA	False	AATAAA	-11	NA	25620074	25610687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_25612769_25619850
Isoform_76507_3	chr18	-	3248	10	ISM	ENSMUSG00000024268.17	ENSMUST00000115816.3	3995	13	248912	-1	-3832	1	3prime_fragment	FALSE	canonical	3	7	junction_2	9.7410927974683	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCAAAAACCTC	NA	False	NA	NA	False	AATAAA	-11	NA	25638128	25610687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_25612769_25619850_25620023_25624137_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
Isoform_76508_3	chr18	-	3183	10	NIC	ENSMUSG00000024268.17	novel	3995	13	NA	NA	-3831	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	12.4939491527739	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCAAAAACCT	NA	False	NA	NA	False	AATAAA	-10	NA	25638127	25610688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636135_25637195_25637340_25637545_25637626_25637946
Isoform_76509_3	chr18	-	1016	6	ISM	ENSMUSG00000024268.17	ENSMUST00000224553.2	1729	12	248647	17727	-3816	7020	internal_fragment	FALSE	non_canonical	0	0	junction_3	11.7813411800185	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCTGTCTGCATCCCA	NA	False	NA	NA	False	AGTAAA	-13	NA	25638112	25630256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_25630588_25634257_25634408_25635989_25636135_25637195_25637340_25637545_25637626_25637946
Isoform_7651_3	chr10	+	2357	4	NIC	ENSMUSG00000073427.5	novel	1531	7	NA	NA	-2	1947	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	64.8194072447099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATGACAAGTATCCCA	NA	False	NA	NA	False	NA	NA	NA	82190086	82238627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_82190216_82204404_82204532_82204731_82204793_82236587
Isoform_76510_7	chr18	-	1037	6	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248912	18120	-3832	7022	internal_fragment	FALSE	canonical	3	20	junction_1	5.17687164221791	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTCTGCATCCCACT	NA	False	NA	NA	False	AGTAAA	-15	NA	25638128	25630254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
Isoform_76511_187	chr18	-	2948	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	2	1421	2	-1421	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTATGGTTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	31742953	31714641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
Isoform_76518_4	chr18	-	4376	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-2	-3	-2	3	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATATATGTTTCTCTT	NA	False	NA	NA	False	GATAAA	-15	NA	31742957	31713217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
Isoform_76520_10	chr18	-	2846	7	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	2	-1422	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	63.5883025581138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATTTTATGGTTAA	NA	False	NA	-18	True	AATAAA	-14	NA	31742953	31714642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_31716823_31727629_31727688_31730091_31730149_31735775_31735854_31738805_31738864_31740274_31740318_31742581
Isoform_76521_3	chr18	-	1174	2	Fusion	ENSMUSG00000117650.2_ENSMUSG00000117481.2	novel	537	2	NA	NA	-2140	57	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTACCAACCTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	32247500	32245036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr18_-_32246026_32247315
Isoform_76522_3	chr18	-	1186	5	ISM	ENSMUSG00000024386.10	ENSMUST00000234651.2	1575	9	4727	1	2274	-1	3prime_fragment	FALSE	canonical	3	7	junction_1	1.78535710713571	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCCCGAGTACCTGTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	32266525	32256179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_32256870_32258147_32258266_32260445_32260592_32266199_32266335_32266428
Isoform_76529_4	chr18	-	5288	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	24	-215	-17	215	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAATGTTTCCTATAATA	NA	False	NA	-14	True	AATAAA	-19	NA	33346891	33332192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
Isoform_76532_11	chr18	-	2066	4	FSM	ENSMUSG00000042834.16	ENSMUST00000051087.16	659	4	260	-1667	-44	1	multi-exon	FALSE	canonical	3	37	junction_1	5.90668171555645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGCTTTGGCTCATTA	NA	False	NA	-6	True	AATAAA	-18	NA	33596532	33570073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430
Isoform_76534_24	chr18	-	2182	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	2	1	2	-1	multi-exon	FALSE	canonical	3	35	junction_4	6.79613860953409	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCTTTGGCTCATTAT	NA	False	NA	-5	True	AATAAA	-19	NA	33597080	33570072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
Isoform_76538_7	chr18	-	2397	21	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	115285	633	5	-43	3prime_fragment	FALSE	canonical	3	125	junction_9	22.8133184784678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGTGTCCTTGTCTTG	NA	False	NA	-5	True	NA	NA	NA	34024687	33930012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477
Isoform_76539_34	chr18	-	2956	23	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	323	633	323	-43	3prime_fragment	FALSE	canonical	3	125	junction_9	28.0317116763164	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGTGTCCTTGTCTTG	NA	False	NA	-5	True	NA	NA	NA	34139649	33930012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
Isoform_76540_12	chr18	-	3563	23	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	348	1	348	-1	3prime_fragment	FALSE	canonical	3	125	junction_9	28.0317116763164	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGGTCTCTTTACT	NA	False	NA	-1	True	AATAAA	-12	NA	34139624	33929380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
Isoform_76543_6	chr18	-	3907	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-342	1	-295	-1	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGGTCTCTTTACT	NA	False	NA	-1	True	AATAAA	-12	NA	34140314	33929380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
Isoform_76545_14	chr18	-	3630	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-64	0	-17	0	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGGTCTCTTTACTG	NA	False	NA	0	True	AATAAA	-13	NA	34140036	33929379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
Isoform_76546_17	chr18	-	3315	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-382	633	-335	-43	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGTGTCCTTGTCTTG	NA	False	NA	-5	True	NA	NA	NA	34140354	33930012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
Isoform_76548_40	chr18	-	2948	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-15	633	-15	-43	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGTGTCCTTGTCTTG	NA	False	NA	-5	True	NA	NA	NA	34139987	33930012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
Isoform_76553_10	chr18	-	3686	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-120	0	-73	0	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGGTCTCTTTACTG	NA	False	NA	0	True	AATAAA	-13	NA	34140092	33929379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
Isoform_76554_21	chr18	-	2352	22	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-28996	-43	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_21	43.4022999066663	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGTGTCCTTGTCTTG	NA	False	NA	-5	True	NA	NA	NA	34054023	33930012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
Isoform_76555_3	chr18	-	2994	22	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-29007	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_21	43.4022999066663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGGTCTCTTTAC	NA	False	NA	-2	True	AATAAA	-11	NA	34054034	33929381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
Isoform_76557_365	chr18	-	723	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	21	2108	21	-1	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTTGCCTTTGTTGT	5582	False	NA	-6	True	ATTAAA	-17	NA	34506401	34480045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
Isoform_76558_96	chr18	-	2868	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-19	3	-19	-3	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCTTTAAAATGTTGT	5542	False	NA	-10	True	AATAAA	-24	NA	34506441	34477940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
Isoform_76562_12	chr18	-	863	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-121	2110	-121	-3	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGCTTTGCCTTTGTT	5440	False	NA	-8	True	ATTAAA	-15	NA	34506543	34480047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
Isoform_76563_5	chr18	-	2481	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-50	421	-50	-421	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCTGAGTTTGTGTC	5511	False	NA	0	True	AATAAA	-22	NA	34506472	34478358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
Isoform_76564_6	chr18	-	637	4	NIC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	-35	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	233.445687235573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTGCTTTGCCTTTGT	5526	False	NA	-9	True	ATTAAA	-14	NA	34506457	34480048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_34480222_34482687_34482857_34505457_34505552_34506256
Isoform_76566_10	chr18	-	5115	21	FSM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	7	-1778	-3	1778	multi-exon	FALSE	canonical	2	10	junction_18	10.452152888281	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639869	34573625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
Isoform_76568_3	chr18	-	2997	21	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-3	161	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_16	11.2338773359869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCACCATGTGTGCTTG	NA	False	NA	NA	False	CATAAA	-18	NA	34639869	34575647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
Isoform_7657_908	chr10	+	2978	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	3	521	3	-46	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82465695	82486112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
Isoform_76576_17	chr18	-	3489	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	-248	1227	-248	-12	multi-exon	FALSE	canonical	3	307	junction_21	99.9950565671548	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATCAGAAGGAAAACTCT	NA	False	NA	-17	True	NA	NA	NA	34757902	34732894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_76578_706	chr18	-	3226	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	28	1214	-19	1	multi-exon	FALSE	canonical	3	307	junction_21	99.9950565671548	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGGCCTTTGGTGTG	NA	False	NA	-4	True	NA	NA	NA	34757626	34732881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_7658_95	chr10	+	3024	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	3	475	3	0	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTAGTATACAGGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	82465695	82486158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
Isoform_76580_193	chr18	-	3005	21	FSM	ENSMUSG00000003778.15	ENSMUST00000097626.10	3005	21	28	-28	-19	-1	multi-exon	FALSE	canonical	3	148	junction_13	121.034540524596	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTCTGGCCTTTGGTG	NA	False	NA	-6	True	NA	NA	NA	34757626	34732883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_76584_26	chr18	-	4399	21	NIC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-16	0	intron_retention	FALSE	canonical	3	307	junction_20	95.4622438454073	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757623	34732882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_76585_14	chr18	-	4182	20	NIC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	148	junction_12	118.49401261216	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTCTGGCCTTTGGTG	NA	False	NA	-6	True	NA	NA	NA	34757626	34732883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_76586_22	chr18	-	3016	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115766.8	4258	21	28	1214	-19	1	multi-exon	FALSE	canonical	3	33	junction_11	140.007142674936	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGGCCTTTGGTGTG	NA	False	NA	-4	True	NA	NA	NA	34757626	34732881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_76587_13	chr18	-	2796	20	NIC	ENSMUSG00000003778.15	novel	4258	21	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_11	157.643906028851	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757626	34732882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_7659_265	chr10	+	3001	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	-19	520	12	-45	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCGCAGTCTGAGCGT	NA	False	NA	NA	False	ATTAAA	-17	NA	82465673	82486113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
Isoform_76594_27	chr18	-	2968	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	27	874	-20	-874	multi-exon	FALSE	canonical	3	307	junction_20	102.255794456842	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTCTTTGCTTGTG	NA	False	NA	1	True	NA	NA	NA	34757627	34735101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_7660_31	chr10	+	3046	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	-19	475	12	0	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTAGTATACAGGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	82465673	82486158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
Isoform_76607_116	chr18	-	2075	17	FSM	ENSMUSG00000024370.18	ENSMUST00000025228.12	2084	17	12	-3	-1	3	multi-exon	FALSE	canonical	3	73	junction_1	259.182247655969	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTGTTCTTTCTAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	34784776	34764000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
Isoform_76619_1720	chr18	-	3014	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	14	1105	1	890	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	1720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTCCATATAATATTT	NA	False	NA	-13	True	AATAAA	-15	NA	34784774	34765840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
Isoform_76638_4	chr18	-	1937	8	FSM	ENSMUSG00000024366.9	ENSMUST00000025224.9	1997	8	61	-1	61	1	multi-exon	FALSE	canonical	0	0	junction_2	0.903507902905251	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCCTAATTTTCTTAC	9411	False	NA	NA	False	ATTAAA	-21	NA	34853379	34822949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34823677_34823868_34823958_34824317_34824453_34824601_34824706_34828616_34828930_34837533_34837627_34844168_34844457_34853191
Isoform_76639_8	chr18	-	2211	13	ISM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	-15	1	-15	-1	intron_retention	FALSE	canonical	3	161	junction_8	19.6728450747047	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTAGATGTCTCTAAGC	2777	False	NA	-16	True	AATAAA	-21	NA	34884601	34866046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790
Isoform_76640_8	chr18	-	2033	14	ISM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	6	8	-3	-4	intron_retention	FALSE	canonical	3	161	junction_8	19.4209062001014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2798	False	NA	-23	True	AATAAA	-14	NA	34884580	34866053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166
Isoform_76641_195	chr18	-	1931	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	6	8	-3	-4	multi-exon	FALSE	canonical	3	155	junction_14	20.2922524674833	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2798	False	NA	-23	True	AATAAA	-14	NA	34884580	34866053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_76645_15	chr18	-	2081	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	155	junction_13	20.7081723569914	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2798	False	NA	-23	True	AATAAA	-14	NA	34884580	34866053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884265_34884366
Isoform_76646_12	chr18	-	1942	15	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	48.8411105691983	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2799	False	NA	-23	True	AATAAA	-14	NA	34884579	34866053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_76648_7	chr18	-	1850	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	1	8	junction_5	51.279025551764	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2777	False	NA	-23	True	AATAAA	-14	NA	34884601	34866053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_76649_5	chr18	-	2458	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	155	junction_13	21.055013879536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2789	False	NA	-23	True	AATAAA	-14	NA	34884589	34866053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_34866447_34866629_34866742_34867771_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_76651_5	chr18	-	2350	12	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-14	3	intron_retention	FALSE	canonical	3	11	junction_4	52.1141468079509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATCCAG	2778	False	NA	NA	False	NA	NA	NA	34884600	34867397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_76662_1045	chr18	-	1980	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	34	1695	34	-1695	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTCTCTCTTGGTCTC	NA	False	NA	-8	True	AATATA	-15	NA	35065026	35037532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
Isoform_76664_154	chr18	-	3675	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	32	2	32	-2	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTGTGCTTGAGA	NA	False	NA	NA	False	ATTAAA	-14	NA	35065028	35035839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
Isoform_7667_123	chr10	+	2977	10	NIC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	2	-45	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	344.226023937115	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCGCAGTCTGAGCGT	NA	False	NA	NA	False	ATTAAA	-17	NA	82465694	82486113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484414
Isoform_76721_10825	chr18	-	2816	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	14	219	14	-219	multi-exon	FALSE	canonical	3	5978	junction_5	267.479905787332	10825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	213	False	NA	-11	True	AATAAA	-19	NA	35087396	35070685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
Isoform_76724_573	chr18	-	3033	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	14	2	14	-2	multi-exon	TRUE	canonical	3	5978	junction_5	267.479905787332	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGTCGTTGTAATCTT	213	False	NA	-21	True	CATAAA	-3	NA	35087396	35070468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
Isoform_7674_154	chr10	+	2370	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	114	2953	-90	-1920	5prime_fragment	FALSE	canonical	3	69	junction_7	9.81666256450355	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTATATGGATTCTT	NA	False	NA	14	True	AATAAA	-23	NA	82534954	82575309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
Isoform_7675_31	chr10	+	4286	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	114	1037	-90	-4	intron_retention	FALSE	canonical	3	69	junction_7	9.81666256450355	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGCCCAAATTGTATT	NA	False	NA	6	True	AATAAA	-14	NA	82534954	82577225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
Isoform_76754_4	chr18	-	1863	12	NIC	ENSMUSG00000024357.11	novel	1703	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	63.1377871427979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTCTGTCTCTTGTGTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	35631946	35399449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35625911_35626020_35626197_35626287_35631843
Isoform_76755_3	chr18	-	1781	11	NIC	ENSMUSG00000024357.11	novel	1703	10	NA	NA	11	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_9	58.245686535571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTCTCTTGTGTCTG	NA	False	NA	-2	True	ATTAAA	-18	NA	35631971	35399448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35626197_35626287_35631843
Isoform_76757_167	chr18	-	1666	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	35	2	0	-2	multi-exon	FALSE	canonical	3	128	junction_3	10.8423039781937	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTCTGTCTCTTGTGTC	NA	False	NA	-4	True	ATTAAA	-16	NA	35631947	35399450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
Isoform_76759_18	chr18	-	903	4	FSM	ENSMUSG00000024353.6	ENSMUST00000025211.6	904	4	0	1	0	-1	multi-exon	TRUE	canonical	2	5	junction_1	0.471404520791032	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTGTTGGCTGTTGA	NA	False	NA	-2	True	AATAAA	-15	NA	35782420	35780320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35780780_35780876_35780988_35781311_35781437_35782212
Isoform_76761_61	chr18	-	660	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	39	3	9	1	multi-exon	TRUE	canonical	3	154	junction_2	20.7980768341691	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCTGTAATGCCCAACCT	NA	False	NA	-10	True	AATAAA	-23	NA	35795200	35789744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
Isoform_76764_19	chr18	-	681	4	FSM	ENSMUSG00000024352.13	ENSMUST00000096573.4	710	4	29	0	-1	0	multi-exon	FALSE	canonical	3	181	junction_2	13.2748718344933	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTATCCCATTT	NA	False	NA	-1	True	NA	NA	NA	35795210	35793068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35793407_35793496_35793628_35793844_35793911_35795064
Isoform_76766_10	chr18	-	5205	9	NIC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	32	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	22.8250821466211	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCGACTTTATGACTCC	NA	False	NA	-7	True	ATTAAA	-15	NA	35836142	35804158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835559_35836078
Isoform_76768_10	chr18	-	5143	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	0	3	0	-3	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCGACTTTATGACTCC	NA	False	NA	-7	True	ATTAAA	-15	NA	35836174	35804158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
Isoform_76769_28	chr18	-	1236	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	-16	3926	-16	2	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTACTCTCTGCTGAC	NA	False	NA	-8	True	AATACA	-16	NA	35836190	35808081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
Isoform_7677_3	chr10	+	2272	15	FSM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	113	1037	-91	-4	multi-exon	FALSE	canonical	2	3	junction_14	23.6837152353033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGCCCAAATTGTATT	NA	False	NA	6	True	AATAAA	-14	NA	82534953	82577225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813_82575100_82577114
Isoform_76771_3	chr18	-	818	3	ISM	ENSMUSG00000024350.7	ENSMUST00000237995.2	909	7	7463	3058	2170	-3058	internal_fragment	FALSE	canonical	3	58	junction_2	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	35834004	35819382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_35819907_35830030_35830177_35833856
Isoform_76772_5	chr18	-	1925	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	20	354	20	-2	multi-exon	FALSE	canonical	2	5	junction_4	3.35638289270592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTAGAATGGCCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	35873587	35867087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
Isoform_76773_14	chr18	-	1868	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	85	346	-7	6	multi-exon	FALSE	canonical	2	5	junction_4	3.35638289270592	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGCCTCTTCCCCTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	35873522	35867079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
Isoform_76774_3	chr18	-	2201	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	93	5	1	-5	multi-exon	TRUE	canonical	2	5	junction_4	3.35638289270592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAACTGCCTTGGCCTAGT	NA	False	NA	NA	False	NA	NA	NA	35873514	35866738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
Isoform_76775_6	chr18	-	2903	10	FSM	ENSMUSG00000060275.15	ENSMUST00000115713.9	3056	10	10	143	10	119	multi-exon	FALSE	canonical	0	0	junction_9	2.45452467048606	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-35	NA	36330423	36150847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36165388_36165466_36171283_36171405_36178910_36179030_36185832_36186005_36329480
Isoform_76778_1599	chr18	-	686	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	16	407	16	122	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	1599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587561	36537135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
Isoform_76779_21	chr18	-	694	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	31	384	31	145	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGAGAGGCAAGTGTC	NA	False	NA	0	True	AATAAA	-43	NA	36587546	36537112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
Isoform_76783_32	chr18	-	601	3	FSM	ENSMUSG00000024346.7	ENSMUST00000237792.2	1024	3	16	407	16	122	multi-exon	FALSE	canonical	3	64	junction_1	1494	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587561	36537135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36537514_36584132_36584300_36587505
Isoform_76785_99	chr18	-	2337	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	33	5	3	-5	multi-exon	FALSE	canonical	3	29	junction_4	10.9068785635488	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTTCTGTTTCATTTT	NA	False	NA	-15	True	AATAAA	-17	NA	36648825	36637984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
Isoform_76789_6	chr18	-	4342	2	FSM	ENSMUSG00000024486.7	ENSMUST00000236520.2	2890	2	-3	-1449	-3	1340	multi-exon	FALSE	canonical	3	46	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36648831	36644282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36648314_36648520
Isoform_76790_10	chr18	-	865	5	FSM	ENSMUSG00000006050.13	ENSMUST00000006209.5	695	5	-4	-166	1	9	multi-exon	FALSE	canonical	3	109	junction_2	590.993443280042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGTAGGAAAGATGAGCC	NA	False	NA	-26	True	NA	NA	NA	36803342	36800315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36800713_36800843_36800947_36801704_36801902_36803056_36803183_36803300
Isoform_76792_18	chr18	-	998	4	FSM	ENSMUSG00000006050.13	ENSMUST00000173202.3	1299	4	327	-26	4	0	multi-exon	FALSE	canonical	3	1470	junction_2	40.4227658628155	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGATGTCAGACTG	NA	False	NA	-9	True	NA	NA	NA	36803334	36800298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056
Isoform_76793_747	chr18	-	891	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	526	562	1	3	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATGTCAGACTGGTT	NA	False	NA	-6	True	NA	NA	NA	36803342	36800295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
Isoform_76794_35	chr18	-	947	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	526	506	1	59	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGTCTCATTCATCAA	NA	False	NA	50	True	NA	NA	NA	36803342	36800239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
Isoform_76799_12	chr18	-	763	4	FSM	ENSMUSG00000006050.13	ENSMUST00000236330.2	760	4	0	-3	0	0	multi-exon	FALSE	canonical	3	29	junction_3	696.127542592272	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGATGTCAGACTG	NA	False	NA	-9	True	NA	NA	NA	36803343	36800298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803300
Isoform_768_1930	SIRV4003	+	4000	1	FSM	SIRV4003A	SIRV4003	4001	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1930	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	1	4001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4003_+_0_4000
Isoform_76801_8	chr18	-	2279	12	FSM	ENSMUSG00000117679.2	ENSMUST00000236001.2	2258	12	-21	0	-21	0	multi-exon	FALSE	canonical	3	26	junction_10	13.4925752462923	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGTGATGAGTATATTGA	NA	False	NA	-3	True	AATAAA	-18	NA	36812390	36804207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
Isoform_76802_4	chr18	-	2025	10	NIC	ENSMUSG00000117679.2	novel	2258	12	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	5	junction_9	18.684515276322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAGTGATGAGTATATT	NA	False	NA	-5	True	AATAAA	-16	NA	36812379	36804209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810046_36810162_36810310_36810497_36810559_36812049
Isoform_76803_4	chr18	-	2428	12	NIC	ENSMUSG00000117679.2	novel	2067	13	NA	NA	-116	0	intron_retention	FALSE	canonical	3	9	junction_7	17.4876579855103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGATGAGTATATTGAC	NA	False	NA	-2	True	AATAAA	-19	NA	36812535	36804206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810049_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
Isoform_76805_5	chr18	-	2922	15	NNC	ENSMUSG00000044719.6	novel	2016	13	NA	NA	-147	730	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.17124059336724	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCTCTATCTCTCAA	NA	False	NA	NA	False	NA	NA	NA	36829125	36817245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_36818622_36818699_36818859_36819741_36819907_36820298_36820370_36821210_36821269_36821937_36822016_36822086_36822296_36824493_36824628_36825266_36825366_36825451_36825539_36826090_36826174_36827736_36827815_36828592_36828713_36828850_36828899_36828968
Isoform_7681_37	chr10	+	3476	16	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_2	261.243658083577	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCGTGCCTTCTGACTGA	NA	False	NA	13	True	AATAAA	-14	NA	82695041	82733544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_82695135_82696357_82696465_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_76810_1125	chr18	-	416	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	27	129	27	-129	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCAGAATGTCCTCTT	NA	False	NA	-21	True	TATAAA	-18	NA	36877583	36875513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36875712_36877233_36877341_36877472
Isoform_76811_104	chr18	-	512	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	27	33	27	-33	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	75	True	TATAAA	-23	NA	36877583	36875417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36875712_36877233_36877341_36877472
Isoform_76813_79	chr18	-	1486	4	FSM	ENSMUSG00000044595.11	ENSMUST00000061522.8	1451	4	-33	-2	-17	0	multi-exon	TRUE	canonical	3	43	junction_2	7.76029781788188	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTGCTTGGTATAC	NA	False	NA	-6	True	ATTAAA	-16	NA	36899284	36896723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36897541_36898148_36898611_36898945_36899064_36899195
Isoform_76821_919	chr18	-	1950	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	38	1	38	-1	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTGTGTCCTTGATG	NA	False	NA	-3	True	AATAAA	-15	NA	36916220	36899581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
Isoform_76827_1437	chr18	-	1737	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	34	1531	34	-1531	multi-exon	FALSE	canonical	3	1260	junction_1	0	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	37777223	37775074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_37776586_37776997
Isoform_76828_61	chr18	-	2960	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	34	308	34	-308	multi-exon	FALSE	canonical	3	1260	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTAAATCCTACATTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	37777223	37773851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_37776586_37776997
Isoform_76830_40	chr18	-	1819	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	-48	1531	-48	-1531	multi-exon	FALSE	canonical	3	1260	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	37777305	37775074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_37776586_37776997
Isoform_76841_19	chr18	-	2119	3	ISM	ENSMUSG00000024456.17	ENSMUST00000115629.9	5416	26	52977	-1	-32	-1	3prime_fragment	FALSE	canonical	3	94	junction_2	4.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTCCCTCTAGCCTCCT	680	False	NA	-23	True	AATAAA	-12	NA	37986492	37976656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_37978552_37984603_37984691_37986355
Isoform_76843_4	chr18	-	2155	4	ISM	ENSMUSG00000024456.17	ENSMUST00000115629.9	5416	26	52837	-2	-172	0	3prime_fragment	FALSE	canonical	3	87	junction_3	6.54896090146283	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCCCTCTAGCCTCCTT	540	False	NA	-22	True	AATAAA	-13	NA	37986632	37976655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596
Isoform_76844_27	chr18	-	1623	15	ISM	ENSMUSG00000024456.17	ENSMUST00000025337.14	5596	28	-58	48329	-16	4225	5prime_fragment	FALSE	canonical	3	41	junction_1	3.7931194421005	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAAAGATGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	38068492	38024984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
Isoform_76849_572	chr18	-	1986	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	40	6	-2	-6	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTACTTTATTAGTTAG	NA	False	NA	-11	True	AATAAA	-15	NA	38088029	38070030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
Isoform_76850_608	chr18	-	1885	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	41	106	-1	-106	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTACCTTTCTGGGA	NA	False	NA	-6	True	AATAAA	-19	NA	38088028	38070130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
Isoform_76851_27	chr18	-	2033	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	0	-1	0	1	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTAGTTAGGCCATGT	NA	False	NA	-4	True	AATAAA	-22	NA	38088069	38070023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
Isoform_76852_33	chr18	-	1932	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	0	100	0	-100	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTTCTGGGATTTTAA	NA	False	NA	0	True	AATAAA	-25	NA	38088069	38070124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
Isoform_76853_23	chr18	-	2372	14	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	500	junction_2	40.7767772406081	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTACTTTATTAGTTAG	NA	False	NA	-11	True	AATAAA	-15	NA	38088038	38070030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
Isoform_7686_1580	chr10	+	3403	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	1	-1107	1	0	multi-exon	FALSE	canonical	1	267	junction_3	142.059218034492	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695041	82733546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_76860_18	chr18	-	4257	20	FSM	ENSMUSG00000038524.14	ENSMUST00000043437.14	4270	20	13	0	-4	0	multi-exon	FALSE	canonical	2	8	junction_13	2.48875587737619	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTCATGTGTTCGTC	NA	False	NA	-2	True	AATAAA	-16	NA	38102814	38090486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
Isoform_76861_6	chr18	-	2578	20	NIC	ENSMUSG00000038524.14	novel	4270	20	NA	NA	-5	-1686	combination_of_known_junctions	FALSE	canonical	2	2	junction_16	3.3601873051605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCAGGGCCTGGGCCTC	NA	False	NA	NA	False	AATAAA	-13	NA	38102815	38092172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100955_38101266_38101335_38101802_38101849_38102407_38102506_38102758
Isoform_76862_4	chr18	-	3878	3	FSM	ENSMUSG00000051375.16	ENSMUST00000159405.3	3880	3	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTGGTTTCTTATTTT	5093	False	NA	NA	False	AATAAA	-15	NA	38345023	38329748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38332582_38335796_38336660_38344841
Isoform_76869_2822	chr18	-	2259	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	31	-1	4	1	multi-exon	FALSE	canonical	3	1055	junction_1	137.188434886716	2822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAATGTGTCTTTTGTG	NA	False	NA	-29	True	ATTAAA	-14	NA	38472025	38460609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
Isoform_7687_212	chr10	+	3427	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	-23	-1107	5	0	multi-exon	TRUE	canonical	1	267	junction_3	142.059218034492	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695017	82733546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_76870_36	chr18	-	2295	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	-5	-1	-5	1	multi-exon	FALSE	canonical	3	1055	junction_1	137.188434886716	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAATGTGTCTTTTGTG	NA	False	NA	-29	True	ATTAAA	-14	NA	38472061	38460609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
Isoform_76875_94	chr18	-	2045	6	FSM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	33	7	-6	1	multi-exon	FALSE	canonical	3	67	junction_2	488.205448556241	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAATGTGTCTTTTGTG	NA	False	NA	-29	True	ATTAAA	-14	NA	38471996	38460609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38462027_38463538_38463714_38466206_38466390_38468068_38468171_38471143_38471276_38471960
Isoform_76877_45	chr18	-	1899	5	FSM	ENSMUSG00000052102.16	ENSMUST00000237487.2	1929	5	8	22	4	1	multi-exon	FALSE	canonical	3	53	junction_1	550.877028019866	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAATGTGTCTTTTGTG	NA	False	NA	-29	True	ATTAAA	-14	NA	38472025	38460609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38462027_38466206_38466390_38468068_38468171_38471143_38471276_38471960
Isoform_76878_4	chr18	-	4660	2	FSM	ENSMUSG00000024427.8	ENSMUST00000025295.8	4755	2	77	18	77	-18	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGCTGCCATTCTCTT	NA	False	NA	NA	False	TATAAA	-19	NA	38734391	38719317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_38723809_38734222
Isoform_76880_5	chr18	-	6750	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	-21	-10	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	16.8221394299298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTCCCAACATGTTTT	NA	False	NA	-23	True	AATAAA	-20	NA	39622962	39543609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622529
Isoform_76881_3	chr18	-	5104	9	NIC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	-78	-273	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	16.8221394299298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTCTCTCTAAAAGGGA	NA	False	NA	NA	False	AATAAA	-24	NA	39623019	39545312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622529
Isoform_76885_25	chr18	-	6421	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	3	12	3	-10	multi-exon	FALSE	canonical	3	29	junction_8	14.4649360523993	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTCCCAACATGTTTT	NA	False	NA	-23	True	AATAAA	-20	NA	39623724	39543609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
Isoform_76886_17	chr18	-	1937	5	NNC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	-22	53	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	28.5919569109916	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGAAGCTTAAGGAAC	NA	False	NA	NA	False	AATGAA	-9	NA	39622963	39557435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_39557553_39561669_39561834_39619050_39620039_39620064_39620299_39622529
Isoform_76887_8	chr18	-	1873	4	NIC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	26	53	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	21.1712593442672	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGAAGCTTAAGGAAC	NA	False	NA	NA	False	AATGAA	-9	NA	39622873	39557435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_39557553_39561669_39561834_39619050_39620299_39622529
Isoform_76892_257	chr18	-	1720	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	73	1535	-13	-1535	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTGTGAAGTTTAC	NA	False	NA	-8	True	ATTAAA	-13	NA	40352409	40338483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
Isoform_76894_9	chr18	-	1805	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	-12	1535	-12	-1535	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTGTGAAGTTTAC	NA	False	NA	-8	True	ATTAAA	-13	NA	40352494	40338483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
Isoform_76896_67	chr18	-	2289	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	70	969	-16	-969	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCAGTTTTTGCTAGTA	NA	False	NA	-6	True	AATAAA	-16	NA	40352412	40337917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
Isoform_76897_4	chr18	-	2371	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	-11	968	-11	-968	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTTTTTGCTAGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	40352493	40337916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
Isoform_76898_8	chr18	-	3244	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	84	0	-2	0	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTGTGTCTTTCTTGCC	NA	False	NA	NA	False	NA	NA	NA	40352398	40336948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
Isoform_76900_229	chr18	-	841	7	FSM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	25	2	0	-2	multi-exon	FALSE	canonical	3	300	junction_2	31.5722275988812	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATGCTTTCTCCAAAT	NA	False	NA	-16	True	AATAAA	-21	NA	42084282	42008666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
Isoform_76901_5	chr18	-	780	6	NIC	ENSMUSG00000056671.8	novel	868	7	NA	NA	11	-3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	138.005217292681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTATGCTTTCTCCAAA	NA	False	NA	-17	True	AATAAA	-20	NA	42084296	42008667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42070698_42070757_42084165
Isoform_7692_306	chr10	+	3296	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	29	0	1	0	multi-exon	FALSE	canonical	1	113	junction_1	208.745903123884	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695041	82733546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_76945_4246	chr18	-	3836	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	92	52	-11	-3	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	4246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395167	42335414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
Isoform_76964_4	chr18	-	2078	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	11	17	11	-17	multi-exon	FALSE	canonical	1	1	junction_3	2.11223541811477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	43526431	43457369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
Isoform_76966_15	chr18	-	1903	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	186	17	186	-17	multi-exon	FALSE	canonical	1	1	junction_3	2.11223541811477	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	43526256	43457369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
Isoform_76967_3	chr18	-	2020	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	232	-146	232	85	multi-exon	FALSE	canonical	1	1	junction_3	2.11223541811477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACTCTCAATTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	43526210	43457206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
Isoform_76969_4	chr18	-	5184	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	-18	-1560	0	1560	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTAGGTAATTTTCCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	44795351	44560786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
Isoform_76970_4	chr18	-	7844	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	-18	-4220	0	0	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTGGATTTAATT	NA	False	NA	NA	False	AATAAA	-15	NA	44795351	44558126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
Isoform_76971_4	chr18	-	5064	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	-56	-1402	-38	1402	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTGGCAATGTCCAGT	NA	False	NA	NA	False	CATAAA	-19	NA	44795389	44560944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
Isoform_76985_8	chr18	-	5201	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	167	2109	1	-2109	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGGAAGGAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	46413893	46370526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
Isoform_76986_3	chr18	-	3577	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	37	-813	0	813	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACTTTGTTTAGGGCC	2750	False	NA	NA	False	AATAAA	-17	NA	46444958	46414404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
Isoform_76987_27	chr18	-	2346	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	-8	463	-8	-463	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTGGCACCATTTTCT	2705	False	NA	-1	True	TATAAA	-22	NA	46445003	46415680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
Isoform_76988_34	chr18	-	2167	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	20	614	-17	393	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACTATTTTAAATA	2733	False	NA	-4	True	ATTAAA	-16	NA	46444975	46415831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
Isoform_76998_59	chr18	-	5699	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	25	2	25	-2	multi-exon	FALSE	canonical	3	135	junction_1	21.5	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAAGTGTGCTCTCATT	NA	False	NA	-5	True	AATAAA	-16	NA	46659013	46634814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46639457_46657168_46657897_46658684
Isoform_77_23	ERCC-00053	+	1006	1	FSM	ERCC-00053A	DQ516785	1007	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00053_+_0_1000
Isoform_77021_5	chr18	-	3104	3	FSM	ENSMUSG00000056130.11	ENSMUST00000070084.11	4204	3	4	1096	4	-1096	multi-exon	FALSE	canonical	3	7	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGACTATTGGTCTCAT	9509	False	NA	NA	False	AATAAA	-16	NA	46707596	46691453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46694140_46705867_46705971_46707281
Isoform_77024_281	chr18	-	3445	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	-3	-2094	-3	1	multi-exon	FALSE	canonical	3	571	junction_1	23	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTTCACTTGTTTCT	NA	False	NA	-11	True	AATAAA	-18	NA	46730605	46719004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46721756_46726315_46726562_46730157
Isoform_77025_1258	chr18	-	3422	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	20	-2094	1	1	multi-exon	FALSE	canonical	3	571	junction_1	23	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTTCACTTGTTTCT	NA	False	NA	-11	True	AATAAA	-18	NA	46730582	46719004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46721756_46726315_46726562_46730157
Isoform_77044_5	chr18	-	1535	5	NIC	ENSMUSG00000033022.9	novel	1595	5	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	76.1019053637949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTACACATTGCCTTTTT	2619	False	NA	-7	True	AATAAA	-15	NA	46861420	46846274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_46847029_46848663_46848834_46853353_46853506_46856384_46856463_46861039
Isoform_77046_8	chr18	-	1690	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	-105	10	-105	1	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGCCTTTTTGATGC	2472	False	NA	-2	True	AATAAA	-20	NA	46861567	46846269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
Isoform_77047_133	chr18	-	1548	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	40	7	0	4	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTTTTTGATGCACA	2617	False	NA	1	True	AATAAA	-23	NA	46861422	46846266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
Isoform_77050_5	chr18	-	1750	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	-164	9	-164	2	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGCCTTTTTGATGCA	2413	False	NA	-1	True	AATAAA	-21	NA	46861626	46846268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
Isoform_77058_528	chr18	-	2466	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	25	2274	3	-2274	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTTATTGTCACATAA	NA	False	NA	-3	True	AATAAA	-26	NA	46874621	46865484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
Isoform_77059_14	chr18	-	2728	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	-245	2282	-244	-2282	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCAGAATAACTTATTG	NA	False	NA	-11	True	AATAAA	-18	NA	46874891	46865492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
Isoform_77063_116	chr18	-	2457	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	21	667	-13	661	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTATGATTGCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	49888647	49829878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
Isoform_77065_120	chr18	-	1796	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	21	1328	-13	0	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTATAAGTAGCTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	49888647	49830539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
Isoform_77066_25	chr18	-	2486	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	-7	666	-7	662	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTATGATTGCTCTT	NA	False	NA	0	True	AATAAA	-16	NA	49888675	49829877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
Isoform_77067_23	chr18	-	3128	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	18	-1	-16	1	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTTTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	49888650	49829210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
Isoform_77068_19	chr18	-	2266	5	FSM	ENSMUSG00000024505.17	ENSMUST00000237137.2	1484	5	-14	-768	-14	662	multi-exon	FALSE	canonical	3	24	junction_2	81.4996165635152	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTATGATTGCTCTT	NA	False	NA	0	True	AATAAA	-16	NA	49888648	49829877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_49831568_49833325_49833455_49857179_49857275_49861435_49861527_49888387
Isoform_77071_10	chr18	-	2166	4	FSM	ENSMUSG00000024505.17	ENSMUST00000025383.10	1389	4	-10	-767	-10	661	multi-exon	FALSE	canonical	3	19	junction_2	94.5597988341534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTATGATTGCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	49888644	49829878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_49831568_49833325_49833455_49861435_49861527_49888387
Isoform_77072_9	chr18	-	1530	4	FSM	ENSMUSG00000024505.17	ENSMUST00000025383.10	1389	4	-34	-107	0	1	multi-exon	FALSE	canonical	3	19	junction_2	94.5597988341534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTATAAGTAGCTCTAC	NA	False	NA	-7	True	AATAAA	-20	NA	49888668	49830538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_49831568_49833325_49833455_49861435_49861527_49888387
Isoform_77073_6	chr18	-	2535	7	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	14	661	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	93.7259598806838	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTATGATTGCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	49888620	49829878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_49831568_49833325_49833455_49843562_49843668_49856688_49856882_49857179_49857275_49861435_49861527_49888387
Isoform_77074_424	chr18	-	1301	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	102	0	102	0	multi-exon	FALSE	canonical	3	373	junction_3	12.8354976529934	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551085	53539403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
Isoform_77076_6	chr18	-	1763	4	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	59	-6	intron_retention	FALSE	canonical	3	375	junction_3	11.7756811551038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGACTTTTTTTTGCAAG	NA	False	NA	-17	True	ATTAAA	-14	NA	53551128	53539409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_53540138_53542196_53542382_53544058_53544692_53550911
Isoform_77078_11	chr18	-	3425	3	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	78	-2	intron_retention	FALSE	canonical	3	375	junction_2	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTTTTTGCAAGACTT	NA	False	NA	-13	True	ATTAAA	-18	NA	53551109	53539405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_53540138_53542196_53544692_53550911
Isoform_77087_13	chr18	-	4629	20	ISM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	65	0	58	0	3prime_fragment	FALSE	canonical	1	72	junction_13	47.6573062243881	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877554	53814794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353
Isoform_77089_489	chr18	-	4565	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-11	0	5	0	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877630	53814794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
Isoform_77090_56	chr18	-	4683	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-131	2	-70	-2	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTGGTCGGTCTCT	NA	False	NA	-3	True	AATAAA	-22	NA	53877750	53814796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
Isoform_77092_7	chr18	-	4713	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-160	1	-99	-1	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGGTCGGTCTCTT	NA	False	NA	-2	True	AATAAA	-23	NA	53877779	53814795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
Isoform_77093_8	chr18	-	4399	20	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_14	71.811194429764	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877662	53814794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
Isoform_77095_8	chr18	-	4435	20	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	72.40257567234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTGTGGTCGGTCTC	NA	False	NA	-4	True	AATAAA	-21	NA	53877602	53814797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_53816537_53818954_53819101_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
Isoform_77103_368	chr18	-	1869	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	42	3	-41	-3	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGGTTTGGTGAGTT	NA	False	NA	-8	True	ATTAAA	-27	NA	56695339	56659818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
Isoform_77104_395	chr18	-	1842	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	69	3	-14	-3	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGGTTTGGTGAGTT	NA	False	NA	-8	True	ATTAAA	-27	NA	56695312	56659818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
Isoform_77105_17	chr18	-	1956	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	-45	3	-26	-3	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGGTTTGGTGAGTT	NA	False	NA	-8	True	ATTAAA	-27	NA	56695426	56659818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
Isoform_77110_150	chr18	-	2059	20	FSM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	47	2025	47	-3	multi-exon	FALSE	canonical	3	60	junction_19	109.003545140448	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGGTTTGGTGAGTT	2901	False	NA	-8	True	ATTAAA	-27	NA	56705976	56659818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
Isoform_77115_5	chr18	-	2327	5	NIC	ENSMUSG00000024592.16	novel	726	6	NA	NA	9	-74	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	31.2329953734828	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCATTGGTTCACCTTG	NA	False	NA	NA	False	NA	NA	NA	57108417	57088978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108381
Isoform_77117_19	chr18	-	1152	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	6	1242	6	539	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATATTTTGTCAAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	57108434	57090146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
Isoform_77118_3	chr18	-	1236	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	-24	1188	-24	593	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTTTTTTGCTTAA	NA	False	NA	NA	False	AATGAA	-15	NA	57108464	57090092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
Isoform_77119_18	chr18	-	2388	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	12	0	-2	0	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCTGTTGGTAGTT	NA	False	NA	NA	False	NA	NA	NA	57108428	57088904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
Isoform_77121_3	chr18	-	1202	6	NNC	ENSMUSG00000024592.16	novel	726	6	NA	NA	9	512	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	44.1017006474807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTAAACATGTGTTTT	NA	False	NA	NA	False	CATAAA	-16	NA	57108417	57090173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_57090994_57091189_57091260_57091594_57091652_57095472_57095591_57106455_57106557_57108381
Isoform_77122_5	chr18	-	1532	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	454	4	43	-4	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTTTTGTTTGTT	NA	False	NA	-2	True	GATAAA	-11	NA	60634605	60607266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_60608658_60634464
Isoform_77123_6	chr18	-	1566	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	356	68	-55	-68	multi-exon	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTGAAGCTTTTCTTT	NA	False	NA	-21	True	AATAAA	-13	NA	60634703	60607330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_60608658_60634464
Isoform_77124_14	chr18	-	1467	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	455	68	44	-68	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTGAAGCTTTTCTTT	NA	False	NA	-21	True	AATAAA	-13	NA	60634604	60607330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_60608658_60634464
Isoform_77125_5	chr18	-	1626	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	363	1	-48	-1	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTTGTTTGTTTGT	NA	False	NA	1	True	GATAAA	-14	NA	60634696	60607263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_60608658_60634464
Isoform_77127_5	chr18	-	1459	2	NNC	ENSMUSG00000038059.8	novel	1990	2	NA	NA	11807	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTTGTTTGTTTGT	7262	False	NA	1	True	GATAAA	-14	NA	60622841	60607263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_60608658_60622776
Isoform_77128_4	chr18	-	7859	15	NIC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_14	10.0957153975216	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGGTCTTGTTCTTGT	NA	False	NA	-7	True	AATAAA	-18	NA	60881444	60817565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881382
Isoform_77129_3	chr18	-	8149	15	NIC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	2	11	junction_14	10.0957153975216	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGTGGGTCTTGTTCTT	NA	False	NA	-9	True	AATAAA	-16	NA	60881736	60817567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881382
Isoform_77130_17	chr18	-	7960	15	FSM	ENSMUSG00000054008.10	ENSMUST00000237783.2	6478	15	-14	-1468	-14	-1	multi-exon	FALSE	canonical	2	17	junction_9	9.29367790380062	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGTCTTGTTCTTG	NA	False	NA	-8	True	AATAAA	-17	NA	60881736	60817566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881572
Isoform_77166_901	chr18	-	4613	26	FSM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	-27	9	3	-9	multi-exon	FALSE	canonical	2	549	junction_9	234.649375878139	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982028	60946835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
Isoform_77191_1081	chr18	-	4515	25	FSM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	11	3	-1	-3	multi-exon	FALSE	canonical	2	677	junction_9	198.19802369656	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTTGCCTTCCCCATG	NA	False	NA	-21	True	AATAAA	-14	NA	60982032	60946829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
Isoform_77193_58	chr18	-	4366	24	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	235	junction_14	265.896614216495	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982024	60946826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
Isoform_7721_258	chr10	+	3508	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	1	119670	1	-119670	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTATTTGGTGGCAC	NA	False	NA	17	True	TTTAAA	-6	NA	83196085	83204699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
Isoform_77231_10	chr18	-	3378	14	FSM	ENSMUSG00000052026.9	ENSMUST00000025520.10	3366	14	-14	2	-14	-2	multi-exon	FALSE	canonical	2	6	junction_10	5.15671561910596	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTACCTGACTCTGCT	NA	False	NA	-7	True	AATAAA	-17	NA	61147308	61128453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61147048
Isoform_77232_1829	chr18	-	1769	3	FSM	ENSMUSG00000024619.9	ENSMUST00000025521.9	1750	3	-20	1	-20	-1	multi-exon	FALSE	canonical	3	995	junction_1	57.5	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCTGCCATCCTTTCTCG	7734	False	NA	-6	True	ATTAAA	-21	NA	61169291	61151934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61153014_61153445_61153592_61168747
Isoform_77237_62	chr18	-	1871	4	NNC	ENSMUSG00000024619.9	novel	1750	3	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	439.390486924785	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGCTGCCATCCTTTCTC	7734	False	NA	-7	True	ATTAAA	-20	NA	61169291	61151935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_61153014_61153445_61153592_61157113_61157217_61168747
Isoform_77244_161	chr18	-	5076	21	FSM	ENSMUSG00000024622.9	ENSMUST00000091884.6	5103	21	23	4	1	-4	multi-exon	FALSE	canonical	3	70	junction_14	23.3398264775041	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAGAGCCTGTTCAA	5847	False	NA	-9	True	AATAAA	-25	NA	61310099	61264352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_77245_191	chr18	-	5192	20	FSM	ENSMUSG00000024622.9	ENSMUST00000235480.2	5131	20	-47	-14	6	-1	multi-exon	FALSE	canonical	3	101	junction_18	18.508813502905	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGAGCCTGTTCAATGC	5830	False	NA	-6	True	AATAAA	-28	NA	61310116	61264349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_77247_5	chr18	-	2851	12	FSM	ENSMUSG00000024622.9	ENSMUST00000237443.2	3410	12	-21	580	1	-580	multi-exon	FALSE	canonical	3	70	junction_5	21.5206992420732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGAGTGGCCTTTGGTCC	5825	False	NA	NA	False	ATTAAA	-15	NA	61310121	61282944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_77248_4	chr18	-	2965	11	ISM	ENSMUSG00000024622.9	ENSMUST00000235480.2	5131	20	-53	18564	0	-563	5prime_fragment	FALSE	canonical	3	101	junction_9	14.3069912979634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGCTCTCATCTCTG	5824	False	NA	NA	False	ATTAAA	-32	NA	61310122	61282927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_77250_8	chr18	-	2071	4	ISM	ENSMUSG00000024622.9	ENSMUST00000237443.2	3410	12	-21	17113	1	1385	5prime_fragment	FALSE	canonical	3	101	junction_2	14.6969384566991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCAAGCTC	5825	False	NA	NA	False	AATAAA	-12	NA	61310121	61299477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_77251_10	chr18	-	3490	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	23	4301	23	2	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATGAA	8738	False	NA	NA	False	NA	NA	NA	61344661	61330291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
Isoform_77253_13	chr18	-	3244	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	15	4555	15	-252	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAGAATGGCAGTGGAA	8730	False	NA	NA	False	AAGAAA	-8	NA	61344669	61330545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
Isoform_77255_7	chr18	-	3549	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	-38	4303	-38	0	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATG	8677	False	NA	NA	False	NA	NA	NA	61344722	61330293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
Isoform_77258_144	chr18	-	3640	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	16	0	-15	0	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGCTCTGATTACTGT	3309	False	NA	NA	False	AAAAAG	-37	NA	61533486	61431206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
Isoform_77264_122	chr18	-	2038	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	-21	0	-21	0	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGACTTATTCTTTTT	NA	False	NA	-1	True	TATAAA	-16	NA	61840727	61829907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
Isoform_77265_9	chr18	-	2648	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	22	-653	0	653	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATTAAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	61840684	61829254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
Isoform_77266_12	chr18	-	2060	7	NNC	ENSMUSG00000024579.8	novel	2017	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	34.3693177121688	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTATTCTTTTTT	NA	False	NA	0	True	TATAAA	-17	NA	61840706	61829906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836423_61836466_61836582_61836790_61840564
Isoform_77267_141	chr18	-	4009	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	14	15	14	-15	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAAAAACACCTCT	NA	False	NA	-17	True	AATATA	-31	NA	61859380	61845509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
Isoform_77270_142	chr18	-	1432	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	14	2592	14	-5	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATATTTTTTACAGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	61859380	61848086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
Isoform_77277_7	chr18	-	1626	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-30	2442	-28	145	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGCATTGTAAAGCAGTT	NA	False	NA	NA	False	AATACA	-13	NA	61859424	61847936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
Isoform_77280_5	chr18	-	1560	3	ISM	ENSMUSG00000033032.16	ENSMUST00000154876.8	2842	16	50663	0	50663	0	3prime_fragment	FALSE	canonical	3	21	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCAGAGGGTAGCTGGC	NA	False	NA	1	True	AATAAA	-21	NA	61869019	61863331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_61864382_61866774_61866904_61868638
Isoform_77282_4	chr18	-	2671	19	FSM	ENSMUSG00000033032.16	ENSMUST00000120472.2	3444	19	23	750	-19	-72	multi-exon	TRUE	canonical	1	2	junction_17	8.65740245593045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTTTCCTTGGCCTCTC	NA	False	NA	NA	False	AATGAA	-17	NA	61919750	61864081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633_61888746_61889910_61890006_61890722_61890807_61891670_61891800_61919646
Isoform_77283_11	chr18	-	1701	5	NNC	ENSMUSG00000033032.16	novel	2842	16	NA	NA	49251	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	5.2618912949623	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCAGAGGGTAGCTGGC	NA	False	NA	1	True	AATAAA	-21	NA	61870431	61863331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870253
Isoform_77289_229	chr18	-	4289	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-31	-4	-31	4	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAGAGCATTTCTAGT	NA	False	NA	-44	True	AATAAA	-20	NA	62681797	62637221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_77290_108	chr18	-	4372	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-31	-87	-31	87	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTTGCCATGGA	NA	False	NA	39	True	AATAAA	-10	NA	62681797	62637138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_77293_7	chr18	-	4429	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-175	0	-175	0	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681941	62637225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_77296_53	chr18	-	4244	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_21	58.4071253380051	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGTTTCCAGAGCATT	NA	False	NA	-50	True	AATAAA	-14	NA	62681799	62637227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
Isoform_77297_23	chr18	-	4341	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-42	86	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_21	58.4071253380051	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCTTGCCATGG	NA	False	NA	38	True	AATAAA	-9	NA	62681808	62637139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
Isoform_77299_61	chr18	-	4293	22	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-34	2	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	62.0483682299543	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTCCAGAGCATTTCTA	NA	False	NA	-46	True	AATAAA	-18	NA	62681800	62637223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_77300_31	chr18	-	4378	22	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-34	87	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	62.0483682299543	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTTGCCATGGA	NA	False	NA	39	True	AATAAA	-10	NA	62681800	62637138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_77304_27	chr18	-	4152	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-31	92	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	64.6469568111548	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTGCCATGGACTTGA	NA	False	NA	44	True	AATAAA	-15	NA	62681797	62637133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_77305_38	chr18	-	4056	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-31	-4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	64.6469568111548	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGAGTTTCCAGAGCA	NA	False	NA	-52	True	AATAAA	-12	NA	62681797	62637229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_77306_10	chr18	-	4014	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-30	-4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	77.8143613347303	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGAGTTTCCAGAGCA	NA	False	NA	-52	True	AATAAA	-12	NA	62681796	62637229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
Isoform_77308_9	chr18	-	4087	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-51	4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	80.3868481250131	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAGAGCATTTCTAGT	NA	False	NA	-44	True	AATAAA	-20	NA	62681817	62637221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_77309_9	chr18	-	3752	15	ISM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-33	9714	-33	2	5prime_fragment	FALSE	canonical	3	214	junction_14	35.5617456700601	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGATGTTTTATGATAG	NA	False	NA	NA	False	AATAAA	-21	NA	62681799	62646939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_7731_7	chr10	+	5867	33	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	16	13	combination_of_known_junctions	TRUE	canonical	3	23	junction_8	58.2823056204668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATTGGATGCTTAAGG	NA	False	NA	27	True	AATAAA	-30	NA	83379820	83432350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
Isoform_77314_29	chr18	-	4232	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	111	0	-4	0	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTGTTTGTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	63825397	63794164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
Isoform_77315_184	chr18	-	1298	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	37	3008	37	-2	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTCGTCATTCTATAT	NA	False	NA	-3	True	AATAAA	-23	NA	63825471	63797172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
Isoform_77321_32	chr18	-	1317	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	13	3013	13	-1	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAAGTCTTCGTCATTC	NA	False	NA	-8	True	AATAAA	-18	NA	63825495	63797177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
Isoform_77324_68	chr18	-	2712	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	37	1594	37	679	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTCTCATCCTATTTG	NA	False	NA	-25	True	ATTAAA	-19	NA	63825471	63795758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
Isoform_77326_27	chr18	-	4259	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	83	1	-32	-1	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTATTTGTTTGTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	63825425	63794165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
Isoform_77327_10	chr18	-	2735	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	15	1593	15	680	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCTCATCCTATTTGA	NA	False	NA	-24	True	ATTAAA	-20	NA	63825493	63795757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
Isoform_77334_214	chr18	-	2900	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	33	3638	-4	709	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACAGAACATTTCTTTG	NA	False	NA	-10	True	NA	NA	NA	64622138	64589622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
Isoform_77335_361	chr18	-	2187	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	33	4351	-4	0	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCTGTGTACGCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	64622138	64590335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
Isoform_77342_31	chr18	-	2074	10	FSM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	-15	0	-5	0	multi-exon	FALSE	canonical	3	22	junction_9	95.9785212597583	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCTGTGTACGCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	64622149	64590335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64621971
Isoform_77343_8	chr18	-	2788	10	FSM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	-14	-715	-4	711	multi-exon	FALSE	canonical	3	22	junction_9	95.9785212597583	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAACATTTCTTTGAG	NA	False	NA	-8	True	NA	NA	NA	64622148	64589620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64621971
Isoform_7736_126	chr10	+	5816	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	35	7	35	-7	multi-exon	FALSE	canonical	3	259	junction_12	27.5850956133924	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAATTTCAAAACTGTC	NA	False	NA	7	True	AATAAA	-10	NA	83379839	83432330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
Isoform_7739_3	chr10	+	5743	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	35	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	80.0622560495893	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGGGGTTCTCCTT	NA	False	NA	-59	True	ATTAAA	-31	NA	83379839	83432264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386750_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400401_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
Isoform_77390_1459	chr18	-	2570	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	111	6	1	-6	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACCAAAACACTT	NA	False	NA	NA	False	AATAAA	-14	NA	64649568	64632734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
Isoform_77392_357	chr18	-	2600	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	81	6	1	-6	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACCAAAACACTT	NA	False	NA	NA	False	AATAAA	-14	NA	64649598	64632734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
Isoform_77403_2757	chr18	-	2573	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	155	17	1	-6	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	2757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACCAAAACACTT	NA	False	NA	NA	False	AATAAA	-14	NA	64649568	64632734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
Isoform_77406_125	chr18	-	2631	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	97	17	0	-6	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACCAAAACACTT	NA	False	NA	NA	False	AATAAA	-14	NA	64649626	64632734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
Isoform_7743_19	chr10	+	1122	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	72	0	11	0	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTCTTAATTATTT	NA	False	NA	6	True	ATTAAA	-19	NA	83558800	83598626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
Isoform_77448_3	chr18	-	1595	3	FSM	ENSMUSG00000024518.5	ENSMUST00000025396.5	1672	3	76	1	56	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGTGCTCATCGACTACAG	NA	False	NA	NA	False	ATTAAA	-22	NA	66072084	66067707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_66068561_66071090_66071345_66071596
Isoform_7746_4	chr10	+	1166	6	NNC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	37.5904243125826	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGATTTCTTAATTATT	NA	False	NA	5	True	ATTAAA	-18	NA	83558750	83598625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_83558899_83573772_83573798_83593313_83593345_83593997_83594078_83595456_83595495_83597781
Isoform_77464_1280	chr18	-	3543	14	FSM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	20	18	-1	1	multi-exon	FALSE	canonical	3	538	junction_1	125.2370060817	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTTTTTCCTCCATT	NA	False	NA	-21	True	AATAAA	-16	NA	66135690	66113826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
Isoform_7747_20	chr10	+	2448	10	FSM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	271	6	0	-6	multi-exon	FALSE	canonical	2	4	junction_1	3.1308895119123	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATGGTAATCTTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	84412760	84450217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84412877_84420611_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
Isoform_77477_484	chr18	-	4657	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	20	-1	-1	1	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTTTTTCCTCCATT	NA	False	NA	-21	True	AATAAA	-16	NA	66135690	66113826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
Isoform_7748_5	chr10	+	1864	6	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	14364	7	-3663	-7	3prime_fragment	FALSE	canonical	2	6	junction_2	2.36643191323985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACATGGTAATCTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	84426853	84450216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
Isoform_77483_8	chr18	-	5712	11	FSM	ENSMUSG00000046318.17	ENSMUST00000130300.3	6572	11	859	1	19	-1	multi-exon	TRUE	canonical	0	0	junction_9	3.55527776692624	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGCTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	66424879	66189926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_66194592_66198939_66198976_66199653_66199690_66199799_66199940_66204271_66204393_66209378_66209483_66216165_66216319_66217808_66217944_66227068_66227122_66424202_66424284_66424691
Isoform_77486_6	chr18	-	2230	11	NIC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-17	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	13.4104436913922	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGAGTTTGGATCTTTT	NA	False	NA	-3	True	GATAAA	-19	NA	67378365	67358117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378176
Isoform_77487_9	chr18	-	2292	11	FSM	ENSMUSG00000062526.5	ENSMUST00000073054.5	2494	11	195	7	32	-7	multi-exon	FALSE	canonical	3	17	junction_4	12.1016527796826	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAGGAGTTTGGATCT	NA	False	NA	-6	True	GATAAA	-16	NA	67378706	67358120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
Isoform_77490_3	chr18	-	2198	11	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	13.2759180473518	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGAGTTTGGATCTTTT	NA	False	NA	-3	True	GATAAA	-19	NA	67378336	67358117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378176
Isoform_77492_22	chr18	-	2310	11	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	11.9348229982686	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGAGTTTGGATCTTTT	NA	False	NA	-3	True	GATAAA	-19	NA	67378724	67358117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
Isoform_77493_6	chr18	-	2159	10	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	55	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	15.4472419528736	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGAGTTTGGATCTTT	NA	False	NA	-4	True	GATAAA	-18	NA	67378683	67358118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
Isoform_77509_2338	chr18	-	3082	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	10	2	10	-2	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGGGTTGCCATGTTG	NA	False	NA	-4	True	AATAAA	-29	NA	67582232	67537835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
Isoform_77510_121	chr18	-	3122	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	-28	0	-28	0	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	NA	False	NA	-2	True	AATAAA	-31	NA	67582270	67537833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
Isoform_77524_76	chr18	-	3824	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-111	-1088	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATGTTAGTAGTTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	67743971	67622931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
Isoform_77528_30	chr18	-	5489	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-125	2	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGTGTTGAATTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	67743985	67621280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
Isoform_7753_202	chr10	+	4879	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	96	0	95	0	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTGAGAGGTGATGT	NA	False	NA	22	True	NA	NA	NA	84458251	84563042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
Isoform_77531_3	chr18	-	5128	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-105	257	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	23.13227271187	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGACCATGAAGAAATGT	NA	False	NA	NA	False	AATAAA	-19	NA	67743965	67621586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
Isoform_77532_4	chr18	-	3806	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-128	-1088	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	23.13227271187	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATGTTAGTAGTTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	67743988	67622931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
Isoform_77533_3	chr18	-	5456	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-126	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	23.13227271187	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGTTGAATTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	67743986	67621279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
Isoform_77535_16	chr18	-	3732	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-155	-1	-155	1	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTTGGATGTCTTGAC	675	False	NA	-3	True	AATAAA	-19	NA	67774561	67750868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
Isoform_77536_7	chr18	-	3773	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-193	-4	-193	4	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGATGTCTTGACTTT	637	False	NA	0	True	AATAAA	-22	NA	67774599	67750865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
Isoform_77537_64	chr18	-	3607	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-28	-3	-28	3	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGATGTCTTGACTT	802	False	NA	-1	True	AATAAA	-21	NA	67774434	67750866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
Isoform_7754_121	chr10	+	4972	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	3	0	2	0	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTGAGAGGTGATGT	NA	False	NA	22	True	NA	NA	NA	84458158	84563042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
Isoform_77540_8	chr18	-	2580	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-195	1191	-195	-1190	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTAAGATCTGTTA	635	False	NA	NA	False	AATAAA	-34	NA	67774601	67752060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
Isoform_77543_6	chr18	-	4440	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-28	-836	-28	836	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAGTCTTGTATTAGTA	802	False	NA	NA	False	AATAAA	-15	NA	67774434	67750033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
Isoform_77544_389	chr18	-	1581	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	-2	-11	-2	10	multi-exon	FALSE	canonical	0	0	junction_7	132.404915801473	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	NA	False	NA	-4	True	ATTAAA	-29	NA	67857660	67798570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
Isoform_77551_19	chr18	-	2673	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	3	-9	3	9	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTACCTTTGTAATGAGT	NA	False	NA	NA	False	AATAAA	-30	NA	67857662	67804272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
Isoform_77553_24	chr18	-	2644	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	25	-2	3	2	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCCCTTACCTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	67857640	67804279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
Isoform_77555_4	chr18	-	4109	5	NIC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	-17	-5590	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	95.0299294959225	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTCTCCCTGACCTAT	NA	False	NA	-1	True	AATAAA	-17	NA	68433290	68398847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412337_68412500_68433144
Isoform_77557_6	chr18	-	2408	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	79	7164	-52	-7164	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGCTTTGGTTGAAG	NA	False	NA	NA	False	NA	NA	NA	68433325	68400421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_77558_60	chr18	-	3411	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	113	6127	-18	-6127	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCCGAGTTCTCCATT	NA	False	NA	-2	True	AATAAA	-18	NA	68433291	68399384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_77559_102	chr18	-	2098	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	130	7423	-1	-7423	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGTCTTTCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	68433274	68400680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_77560_56	chr18	-	3947	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	114	5590	-17	-5590	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTCTCCCTGACCTAT	NA	False	NA	-1	True	AATAAA	-17	NA	68433290	68398847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_77565_4	chr18	-	3895	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	80	5676	-51	-5676	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTACAGTTCATTTGTTA	NA	False	NA	-87	True	ATTAAA	-16	NA	68433324	68398933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_77566_12	chr18	-	9539	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	124	-12	-7	12	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTGTATATATTTTAA	NA	False	NA	NA	False	AATAAA	-26	NA	68433280	68393245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_77567_7	chr18	-	3567	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-313	2	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	57.5298835389052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605893	70585280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77568_33	chr18	-	3219	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	57.5298835389052	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605545	70585280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77570_21	chr18	-	2928	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	68.2567533288831	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605551	70585282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77571_82	chr18	-	3496	8	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_4	46.2782180878624	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605551	70585282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77572_8	chr18	-	3856	8	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	-329	2	intron_retention	FALSE	canonical	3	82	junction_4	46.2782180878624	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605909	70585280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77575_91	chr18	-	3221	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	0	-930	0	2	multi-exon	FALSE	canonical	3	72	junction_5	54.5590276672889	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605551	70585280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77579_18	chr18	-	2924	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	65.9430388668887	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605551	70585282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77580_68	chr18	-	3494	8	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	2	intron_retention	FALSE	canonical	3	98	junction_4	41.1701298496463	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605551	70585280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77582_5	chr18	-	3849	8	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-328	0	intron_retention	FALSE	canonical	3	98	junction_4	41.1701298496463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605908	70585282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77583_5	chr18	-	6761	7	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	180	junction_6	19.2959408512084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605551	70585283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77588_5	chr18	-	3291	6	FSM	ENSMUSG00000044906.7	ENSMUST00000212683.2	3317	6	29	-3	0	2	multi-exon	FALSE	canonical	3	13	junction_1	79.1722173492697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605551	70585280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_70586460_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_77598_128	chr18	-	2830	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	-100	6	30	-1	multi-exon	FALSE	canonical	3	36	junction_9	94.1501296524877	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663309	70641756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
Isoform_77601_159	chr18	-	2411	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	175	5	9	0	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACACTAGGCTCTCACTG	NA	False	NA	-21	True	AATAAA	-14	NA	70663330	70641759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
Isoform_77603_21	chr18	-	2851	10	NNC	ENSMUSG00000038425.19	novel	2736	10	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	99.7728283850399	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663333	70641756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661896_70662821
Isoform_77605_87	chr18	-	2411	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_9	93.0357690406634	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663330	70641756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661896_70663258
Isoform_77607_15	chr18	-	2725	9	NIC	ENSMUSG00000038425.19	novel	2736	10	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	108.347747438514	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663330	70641756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70662821
Isoform_77608_155	chr18	-	2291	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	116	junction_8	75.0961883187156	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663333	70641756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
Isoform_77622_537	chr18	-	3393	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-9	0	-9	0	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTCTAGATTTGGTT	NA	False	NA	-10	True	AATAAA	-19	NA	73836860	73772079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
Isoform_77623_278	chr18	-	3652	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-9	-259	-9	259	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTTTACCCTGAGAGT	NA	False	NA	60	True	AATAAA	-15	NA	73836860	73771820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
Isoform_77634_13	chr18	-	4985	4	FSM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	-19	5	-19	-5	multi-exon	FALSE	canonical	3	22	junction_1	4.32049379893857	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATTTCCTTGTCCTGCG	NA	False	NA	NA	False	NA	NA	NA	73887569	73868113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_73872372_73875407_73875873_73880237_73880403_73887472
Isoform_77637_294	chr18	-	2498	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	2	138	2	-138	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTTCAGTTACATTATC	373	False	NA	-1	True	AATAAA	-19	NA	73948507	73903111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_77638_424	chr18	-	1969	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	2	667	2	-667	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACGGTGTCATCTGTGGT	373	False	NA	-4	True	AAAAAG	-15	NA	73948507	73903640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_7764_10	chr10	+	3064	10	FSM	ENSMUSG00000035620.16	ENSMUST00000038523.15	3069	10	4	1	4	-1	multi-exon	FALSE	canonical	3	6	junction_9	27.2890336586822	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATCTGTGTGTGTGTTT	NA	False	NA	21	True	AATAAA	-22	NA	84753483	84852310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84850939
Isoform_77641_25	chr18	-	2546	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-46	138	-35	-138	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTTCAGTTACATTATC	325	False	NA	-1	True	AATAAA	-19	NA	73948555	73903111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_77642_36	chr18	-	2028	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-57	667	-46	-667	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACGGTGTCATCTGTGGT	314	False	NA	-4	True	AAAAAG	-15	NA	73948566	73903640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_77645_17	chr18	-	3840	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-12	-1190	-1	1190	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTTATTTTTTTTCATG	359	False	NA	NA	False	AATAAA	-19	NA	73948521	73901783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_77647_11	chr18	-	3897	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	2	-1261	2	1261	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTGTTGCTGGTTTTT	373	False	NA	NA	False	NA	NA	NA	73948507	73901712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_7765_28	chr10	+	3273	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-364	0	-324	0	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	22	True	AATAAA	-23	NA	84753155	84852311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
Isoform_77650_3	chr18	+	2443	2	Antisense	novelGene_ENSMUSG00000024556.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73917657	73922616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_73918908_73921423
Isoform_77654_37	chr18	-	4617	6	FSM	ENSMUSG00000024558.13	ENSMUST00000091851.10	4594	6	-25	2	-25	-2	multi-exon	FALSE	canonical	3	19	junction_5	8.45221864364617	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTCAGGAATTGTCAC	9793	False	NA	NA	False	AATAAA	-17	NA	74198025	74061558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74197910
Isoform_77655_23	chr18	-	4821	6	NIC	ENSMUSG00000024558.13	novel	4594	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	6.68131723539603	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTCAGGAATTGTCAC	9388	False	NA	NA	False	AATAAA	-17	NA	74198430	74061558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74198111
Isoform_77656_8	chr18	-	1143	7	FSM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	27	1460	-5	-280	multi-exon	FALSE	canonical	3	11	junction_6	177.375699826354	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTAGGAACGTGGG	6792	False	NA	-1	True	AGTAAA	-34	NA	74340823	74329829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340600
Isoform_77657_18	chr18	-	2574	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	33	-2	-6	2	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCATGGTGGCTTCCTG	6759	False	NA	-6	True	NA	NA	NA	74340856	74328367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
Isoform_77658_266	chr18	-	1060	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	67	1478	-4	-298	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTTCAAAACGTAC	6793	False	NA	-19	True	AGTAAA	-16	NA	74340822	74329847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
Isoform_77659_4	chr18	-	1805	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	4	796	4	384	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTAAGGGTGCGTCTTGT	6730	False	NA	NA	False	NA	NA	NA	74340885	74329165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
Isoform_7766_40	chr10	+	2977	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-68	0	-28	0	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	22	True	AATAAA	-23	NA	84753451	84852311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
Isoform_77660_5	chr18	-	2564	7	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGCATGGTGGCTTCC	6793	False	NA	-8	True	NA	NA	NA	74340822	74328369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
Isoform_77661_30	chr18	-	1131	7	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-5	-286	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTACTGCCTTTAGGAA	6760	False	NA	-7	True	AGTAAA	-28	NA	74340855	74329835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
Isoform_77662_26	chr18	-	3630	6	NIC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-4	-280	intron_retention	FALSE	canonical	3	429	junction_5	34.6040460062115	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTAGGAACGTGGG	6793	False	NA	-1	True	AGTAAA	-34	NA	74340822	74329829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_74330123_74330584_74330755_74332970_74335759_74337334_74337460_74339859_74339956_74340664
Isoform_77665_10	chr18	-	3783	10	FSM	ENSMUSG00000053846.6	ENSMUST00000066532.5	3787	10	4	0	3	0	multi-exon	TRUE	canonical	1	2	junction_4	1.89215404065849	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTGTCCTGTAACTCA	NA	False	NA	NA	False	NA	NA	NA	75094330	75072392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_75074410_75076410_75076516_75078874_75079094_75080076_75080198_75081043_75081287_75082128_75082351_75087248_75087361_75088489_75088670_75090268_75090451_75093948
Isoform_77667_3	chr18	-	3835	10	FSM	ENSMUSG00000053846.6	ENSMUST00000066532.5	3787	10	-49	1	-49	-1	multi-exon	FALSE	canonical	1	2	junction_4	1.89215404065849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTTGTCCTGTAACTC	NA	False	NA	NA	False	NA	NA	NA	75094383	75072393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_75074410_75076410_75076516_75078874_75079094_75080076_75080198_75081043_75081287_75082128_75082351_75087248_75087361_75088489_75088670_75090268_75090451_75093948
Isoform_77668_3	chr18	-	2359	12	NNC	ENSMUSG00000052928.10	novel	6031	12	NA	NA	-88	-3694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.74238238709061	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCGTCCTTGCTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	75830713	75567988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_75568481_75570241_75570296_75604935_75605092_75652809_75653110_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770413_75830462
Isoform_77669_4	chr18	-	1897	16	NNC	ENSMUSG00000025420.14	novel	1942	16	NA	NA	14089	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	8.22732574345327	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTTTCTCCTCATT	NA	False	NA	NA	False	TATAAA	-14	NA	77120850	77064844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
Isoform_7767_41	chr10	+	2940	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-31	0	9	0	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	22	True	AATAAA	-23	NA	84753488	84852311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
Isoform_77670_5	chr18	-	1639	13	NNC	ENSMUSG00000025420.14	novel	1674	14	NA	NA	14041	-858	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	7.91754381105656	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTTGTCAGACTTTA	NA	False	NA	NA	False	NA	NA	NA	77120898	77081752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
Isoform_77671_10	chr18	-	1632	6	NNC	ENSMUSG00000025420.14	novel	1515	6	NA	NA	13955	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	3.26190128606002	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTGCTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	77120984	77097736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
Isoform_77673_8	chr18	-	1961	8	FSM	ENSMUSG00000025427.16	ENSMUST00000026494.14	7300	8	-228	5567	-203	1216	multi-exon	FALSE	canonical	3	20	junction_2	6.65168384389875	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAATCAAAGGTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	77653060	77549372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_77550146_77550579_77550687_77554372_77554469_77554630_77554736_77555936_77556067_77563169_77563281_77571844_77572161_77652737
Isoform_77674_13	chr18	-	1893	8	FSM	ENSMUSG00000025427.16	ENSMUST00000026494.14	7300	8	-160	5567	-135	1216	multi-exon	FALSE	canonical	3	20	junction_2	6.65168384389875	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAATCAAAGGTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	77652992	77549372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_77550146_77550579_77550687_77554372_77554469_77554630_77554736_77555936_77556067_77563169_77563281_77571844_77572161_77652737
Isoform_77677_78	chr18	-	5162	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	-31	-6	19	6	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTCTGAGAATGTT	NA	False	NA	-2	True	AATAAA	-21	NA	77801664	77719186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
Isoform_77679_17	chr18	-	5102	5	FSM	ENSMUSG00000047466.11	ENSMUST00000237203.2	1606	5	1	-3497	1	7	multi-exon	FALSE	canonical	3	34	junction_4	65.6291665343999	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTTCTGAGAATGTTT	NA	False	NA	-1	True	AATAAA	-22	NA	77802185	77719185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77802002
Isoform_77685_222	chr18	-	4993	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	19	5	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCTTTCTGAGAATGT	NA	False	NA	-3	True	AATAAA	-20	NA	77801664	77719187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
Isoform_77686_9	chr18	-	3236	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-12	1707	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATAATTTCTGGTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	77801695	77720975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
Isoform_77688_15	chr18	-	1520	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACTTAGCACAGAGA	NA	False	NA	-7	True	ATTAAA	-15	NA	77801686	77722682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
Isoform_77689_39	chr18	-	4929	4	NIC	ENSMUSG00000047466.11	novel	1606	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	34	junction_3	66.9178600972864	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGACTCTTTCTGAGA	NA	False	NA	-7	True	AATAAA	-16	NA	77802186	77719191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77802002
Isoform_7769_3	chr10	+	4900	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-103	-1888	-63	-2	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGGCTGTGACATTCCG	NA	False	NA	NA	False	NA	NA	NA	84753416	84854199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
Isoform_77693_3	chr18	-	1269	2	FSM	ENSMUSG00000097666.3	ENSMUST00000180530.3	1269	2	3	-3	3	3	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGATTCTTCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	77820436	77817192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_77818179_77820153
Isoform_77697_564	chr18	-	999	9	FSM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	5	-1	5	0	multi-exon	FALSE	canonical	3	1190	junction_6	88.5180066427165	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	False	NA	0	True	AATACA	-20	NA	77855475	77845266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
Isoform_7770_200	chr10	+	3501	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	114	1	-2	-1	multi-exon	FALSE	canonical	3	175	junction_1	7	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGGAATGTTTCATAAA	NA	False	NA	16	True	AATAAA	-16	NA	84938604	84953448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84938862_84946662_84946730_84950271
Isoform_77703_25	chr18	-	2307	7	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	13	-6	intron_retention	FALSE	canonical	3	1190	junction_4	90.0729642505946	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCATTTCTTGTTATC	NA	False	NA	-8	True	AATACA	-12	NA	77855467	77845274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77849817_77851772_77851909_77854563_77854739_77855419
Isoform_77708_4	chr18	-	3212	7	NNC	ENSMUSG00000059336.15	novel	3665	9	NA	NA	9349	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.942809041582063	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCAGTCTCATGTGTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	78157197	78143308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_78145784_78147244_78147295_78152806_78152942_78153123_78153272_78154568_78154762_78156880_78157010_78157115
Isoform_77710_223	chr18	-	4976	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	4	32	4	-32	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGTTCAATTCTTGT	5940	False	NA	55	True	ATTAAA	-21	NA	80194693	80169557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
Isoform_77716_41	chr18	-	4281	4	NNC	ENSMUSG00000053950.11	novel	5012	4	NA	NA	4	-731	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	66.5131565932636	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTTATGGTGCAAACT	5940	False	NA	-24	True	AATAAA	-18	NA	80194693	80170256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_80174210_80180698_80180789_80185863_80185985_80194576
Isoform_77717_53	chr18	-	4955	4	NNC	ENSMUSG00000053950.11	novel	5012	4	NA	NA	26	-35	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	66.5131565932636	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTGTTCAATTCT	5962	False	NA	52	True	ATTAAA	-18	NA	80194671	80169560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_80174210_80180698_80180789_80185863_80185985_80194576
Isoform_77721_320	chr18	-	1378	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	2	-3	2	3	multi-exon	FALSE	canonical	3	236	junction_3	30.0026665481587	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTGTATACGCACAAT	NA	False	NA	0	True	AATAAA	-23	NA	80243871	80235476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
Isoform_77722_444	chr18	-	1351	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	27	-1	27	1	multi-exon	FALSE	canonical	3	236	junction_3	30.0026665481587	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGTGTATACGCACA	NA	False	NA	-2	True	AATAAA	-21	NA	80243846	80235478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
Isoform_77723_10	chr18	-	3503	5	NIC	ENSMUSG00000024570.8	novel	1377	6	NA	NA	21	1	intron_retention	FALSE	canonical	3	264	junction_2	22.6867251933813	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGTGTATACGCACA	NA	False	NA	-2	True	AATAAA	-21	NA	80243852	80235478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_80236098_80236446_80236515_80238233_80240578_80240878_80241099_80243600
Isoform_77724_6	chr18	-	703	4	FSM	ENSMUSG00000078963.4	ENSMUST00000237192.2	1104	4	-20	421	-20	-421	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCACAAGGTGACTACT	NA	False	NA	NA	False	AATAAA	-10	NA	80280068	80273393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_80273777_80276629_80276725_80278663_80278731_80279910
Isoform_77725_6	chr18	-	1100	4	FSM	ENSMUSG00000078963.4	ENSMUST00000237192.2	1104	4	5	-1	5	1	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCTTATGTGTATGG	NA	False	NA	NA	False	AATACA	-15	NA	80280043	80272971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_80273777_80276629_80276725_80278663_80278731_80279910
Isoform_77728_607	chr18	-	3704	13	FSM	ENSMUSG00000033323.15	ENSMUST00000036229.13	3713	13	4	5	4	1	multi-exon	FALSE	canonical	3	130	junction_8	21.1126278694898	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTGTTCTCTGGTGT	NA	False	NA	-8	True	AATAAA	-13	NA	80512906	80451178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
Isoform_7773_12	chr10	+	3591	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	75	-50	-41	50	multi-exon	FALSE	canonical	3	175	junction_1	7	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGATCTTAAAAGTTAAG	NA	False	NA	67	True	AATAAA	-16	NA	84938565	84953499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84938862_84946662_84946730_84950271
Isoform_77732_14	chr18	-	3518	12	NIC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	25	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	54.0249406744333	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTGTGTTCTCTGGT	NA	False	NA	-10	True	AATAAA	-11	NA	80512885	80451180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
Isoform_77733_51	chr18	-	4472	30	FSM	ENSMUSG00000024566.11	ENSMUST00000091790.5	5357	30	-51	936	-2	-2	multi-exon	FALSE	canonical	3	35	junction_1	27.0288523341592	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9770	False	NA	-32	True	AATAAA	-22	NA	80977249	80778291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
Isoform_77735_7	chr18	-	4367	29	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	26.4832205252261	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCCTTTGACCTGAGC	9765	False	NA	-34	True	AATAAA	-20	NA	80977254	80778293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_80779365_80781867_80781997_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
Isoform_77737_186	chr18	-	4440	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	24	686	-2	-1	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTGACCTGAGCGCC	9770	False	NA	-31	True	AATAAA	-23	NA	80977249	80778290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
Isoform_77738_4	chr18	-	5159	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	-10	1	-8	-1	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCTCAGTCCTACAAGGG	9736	False	NA	NA	False	AATAAA	-16	NA	80977283	80777605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
Isoform_77739_3	chr18	-	4350	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_21	27.8299263581022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9764	False	NA	-32	True	AATAAA	-22	NA	80977255	80778291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
Isoform_7774_27	chr10	+	3610	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	4	2	4	-2	multi-exon	FALSE	canonical	3	175	junction_1	7	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGGAATGTTTCATAA	NA	False	NA	15	True	AATAAA	-15	NA	84938494	84953447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84938862_84946662_84946730_84950271
Isoform_77740_5	chr18	-	4363	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_18	26.3690698805415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9769	False	NA	-32	True	AATAAA	-22	NA	80977250	80778291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
Isoform_77742_16	chr18	-	4831	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	82	2166	82	680	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGGTTGCAAATCTTA	NA	False	NA	-2	True	AATAAA	-16	NA	81029904	81011756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
Isoform_77744_15	chr18	-	6347	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	114	618	114	-618	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATCGTGTTCCCTGATT	NA	False	NA	-3	True	AATAAA	-22	NA	81029872	81010208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
Isoform_77746_4	chr18	-	5098	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	82	1899	82	947	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTAACATGATTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	81029904	81011489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
Isoform_77747_5	chr18	-	4345	3	FSM	ENSMUSG00000024565.11	ENSMUST00000238808.2	4214	3	-131	0	104	0	multi-exon	FALSE	canonical	3	38	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAGGAAAG	NA	False	NA	NA	False	TTTAAA	-31	NA	81029882	81012436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_81013120_81014395_81017845_81029669
Isoform_7775_6	chr10	+	3526	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	170	-80	54	80	multi-exon	FALSE	canonical	3	175	junction_1	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGTGTGCTGCAGTAAA	NA	False	NA	97	True	NA	NA	NA	84938660	84953529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_84938862_84946662_84946730_84950271
Isoform_77750_3	chr18	-	3439	8	ISM	ENSMUSG00000041258.19	ENSMUST00000182122.8	6059	31	73851	-1693	-1133	14	3prime_fragment	FALSE	canonical	2	9	junction_4	8.7458444942937	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTGTATGTGTGGT	NA	False	NA	NA	False	CATAAA	-37	NA	82637008	82613586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867
Isoform_77752_35	chr18	-	7907	9	FSM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	1	1	1	-1	multi-exon	FALSE	canonical	3	22	junction_4	5.699506557589	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGTGGTGTACTAAGTG	NA	False	NA	NA	False	AATAAA	-19	NA	84607628	84225826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84576451_84581172_84607562
Isoform_77753_4	chr18	-	3188	8	NIC	ENSMUSG00000048410.18	novel	7909	9	NA	NA	-6	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	11.3820481640241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGGTGGTGGTGTAC	NA	False	NA	NA	False	AATAAA	-13	NA	84607635	84225832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84607562
Isoform_77755_5	chr18	-	5162	2	ISM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	35	350216	35	-5008	5prime_fragment	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGCCTGAAATTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	84607594	84576041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_84581172_84607562
Isoform_77764_58	chr18	-	2066	11	FSM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	86	0	86	0	multi-exon	FALSE	canonical	3	554	junction_9	38.6638073655454	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	-2	True	AATAAA	-21	NA	84700098	84685593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962
Isoform_7777_34	chr10	+	5744	17	FSM	ENSMUSG00000020042.16	ENSMUST00000105307.8	5788	17	42	2	29	1	multi-exon	FALSE	canonical	3	26	junction_1	8.15379512865022	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGCATCCTCTTTATG	NA	False	NA	11	True	ATTAAA	-16	NA	85222719	85496154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
Isoform_77770_697	chr18	-	2070	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	51	3	-24	1	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCCGTGGTCTGACTT	NA	False	NA	-1	True	AATAAA	-22	NA	84703776	84685592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
Isoform_77771_17	chr18	-	2113	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	7	4	7	0	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	-2	True	AATAAA	-21	NA	84703820	84685593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
Isoform_7778_17	chr10	+	5798	17	FSM	ENSMUSG00000020042.16	ENSMUST00000105307.8	5788	17	-10	0	-10	0	multi-exon	TRUE	canonical	3	26	junction_1	8.15379512865022	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85222667	85496156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
Isoform_77781_54	chr18	-	2789	4	FSM	ENSMUSG00000056153.16	ENSMUST00000145120.3	1004	4	-31	-1754	-2	-1	multi-exon	FALSE	canonical	3	33	junction_2	77.821733611005	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAAATTGTTGCCTTT	NA	False	NA	-6	True	ATTAAA	-24	NA	88912465	88886619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_88889043_88905115_88905177_88905332_88905458_88912285
Isoform_77783_19	chr18	-	3081	4	FSM	ENSMUSG00000056153.16	ENSMUST00000145120.3	1004	4	-17	-2060	-5	-16	multi-exon	FALSE	canonical	3	33	junction_2	77.821733611005	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACTTTCTTCTGTATA	NA	False	NA	NA	False	TATAAA	-41	NA	88912451	88886313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_88889043_88905115_88905177_88905332_88905458_88912285
Isoform_77789_187	chr18	-	2765	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	48	1	6	-1	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAAATTGTTGCCTTT	NA	False	NA	-6	True	ATTAAA	-24	NA	88912428	88886619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
Isoform_77791_66	chr18	-	3083	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	9	-278	-4	-43	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATAGAAAGGTTATTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	88912467	88886340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
Isoform_77799_85	chr18	-	2725	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-16	3327	1	-1	multi-exon	FALSE	canonical	3	70	junction_1	76	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAAATTGTTGCCTTT	NA	False	NA	-6	True	ATTAAA	-24	NA	88912462	88886619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_88889043_88905332_88905458_88912285
Isoform_77801_30	chr18	-	2998	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-17	3055	0	-50	multi-exon	FALSE	canonical	3	70	junction_1	76	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGATCTGAATAGAAAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	88912463	88886347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_88889043_88905332_88905458_88912285
Isoform_77802_6	chr18	-	6018	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	15	3	3	-3	multi-exon	FALSE	canonical	3	70	junction_1	76	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGCCTTGTCATCAGT	NA	False	NA	-5	True	AATAAA	-14	NA	88912431	88883295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_88889043_88905332_88905458_88912285
Isoform_77803_7	chr18	-	4152	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	63	1821	0	1184	multi-exon	FALSE	canonical	3	70	junction_1	76	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATTTGCAAATGGTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	88912383	88885113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_88889043_88905332_88905458_88912285
Isoform_77804_10	chr18	-	2725	3	FSM	ENSMUSG00000056153.16	ENSMUST00000123826.2	2921	3	-126	322	-3	-1	multi-exon	FALSE	canonical	3	11	junction_1	105.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAAATTGTTGCCTTT	NA	False	NA	-6	True	ATTAAA	-24	NA	88912466	88886619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_88889043_88905336_88905458_88912285
Isoform_77806_5	chr18	-	3404	3	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-363	-83776	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	38.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGATTTTTGGAGATTT	NA	False	NA	NA	False	AATAAA	-13	NA	34140382	34135622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_34138028_34139037_34139476_34139821
Isoform_77808_5	chr18	-	2848	2	Intergenic	novelGene_5257	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCTTAATAAATTTTCA	NA	False	NA	NA	False	NA	NA	NA	10276080	10272218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_10274701_10275714
Isoform_77809_3	chr18	-	3034	14	NNC	ENSMUSG00000024376.8	novel	540	6	NA	NA	-311	31774	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	55.2673973251916	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTCTCTTTTGTTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	34140330	33978233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_33979333_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
Isoform_77810_5	chr18	-	2096	12	NNC	ENSMUSG00000024376.8	novel	540	6	NA	NA	-28996	31775	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	69.1889256891342	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTCTTTTGTTCTCT	NA	False	NA	NA	False	AATAAA	-26	NA	34054023	33978232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_33979333_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
Isoform_77811_7	chr18	-	659	3	NNC	ENSMUSG00000024477.5	novel	1039	2	NA	NA	-18	5196	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	69	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGAAGTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	46413915	46401361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_46401733_46407656_46407776_46413746
Isoform_77812_7	chr18	-	817	6	NNC	ENSMUSG00000024357.11	novel	342	3	NA	NA	0	8109	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	60.4072843289615	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGGAAGAAGCCCGAATC	NA	False	NA	NA	False	NA	NA	NA	35631947	35473587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_35473827_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
Isoform_77814_5	chr18	-	446	2	Intergenic	novelGene_5419	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTGTCCTTATTGA	NA	False	NA	1	True	AATAAA	-28	NA	45692397	45691124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_45691359_45692185
Isoform_77815_3	chr18	-	408	3	Antisense	novelGene_ENSMUSG00000097738.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	20	junction_2	4.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTTCCTATATTTTC	NA	False	NA	-14	True	AATAAA	-17	NA	82883997	82873436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_82873610_82875076_82875202_82883887
Isoform_77816_5	chr18	-	3629	4	NNC	ENSMUSG00000024357.11	novel	453	3	NA	NA	-3	3993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.1957965469036	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATACTTAGGTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	35631925	35547118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_35550413_35551109_35551249_35571319_35571434_35631843
Isoform_77821_127	chr18	+	2880	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	0	25	combination_of_known_junctions	FALSE	canonical	3	200	junction_1	171.970666103263	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCCTTTTTCTATGATG	-35	True	NA	97	True	NA	NA	NA	3382987	3435410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
Isoform_7783_4	chr10	+	2390	2	FSM	ENSMUSG00000020042.16	ENSMUST00000145433.2	555	2	198	-2033	198	1	multi-exon	FALSE	canonical	3	48	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATCCTCTTTATGGTA	NA	False	NA	14	True	ATTAAA	-19	NA	85490219	85496157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_85490456_85494003
Isoform_77836_99	chr18	+	3805	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	22	1	-3	-1	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCAATTGTCAAGAAATG	10	True	NA	4	True	ATTAAA	-16	NA	3383253	3436376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
Isoform_77858_18	chr18	+	2284	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	-860	3650	-860	-3650	multi-exon	FALSE	canonical	3	117	junction_2	19.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTAGTGGTGTCTTTCA	NA	False	NA	21	True	AATATA	-16	NA	3507062	3512754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_3508286_3511256_3511545_3511981
Isoform_77859_135	chr18	+	1421	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	3	3650	3	-3650	multi-exon	FALSE	canonical	3	117	junction_2	19.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTAGTGGTGTCTTTCA	-5	True	NA	21	True	AATATA	-16	NA	3507925	3512754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_3508286_3511256_3511545_3511981
Isoform_7786_312	chr10	+	2549	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	35	-12	-18	12	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTTCACTCTTATTT	NA	False	NA	20	True	AATAAA	-31	NA	85707729	85724972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
Isoform_77862_24	chr18	+	2099	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234186.2	2110	9	11	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	58.8005102018681	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-1	True	NA	18	True	AATAAA	-20	NA	4375602	4396785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77863_17	chr18	+	2632	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234186.2	2110	9	22	-544	10	1	multi-exon	FALSE	canonical	3	50	junction_3	58.8005102018681	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATAACAGTATTTCT	10	True	NA	16	True	AATAAA	-17	NA	4375613	4397329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77867_239	chr18	+	2095	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	11	545	0	0	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-1	True	NA	18	True	AATAAA	-20	NA	4375602	4396785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77868_140	chr18	+	2639	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	11	1	0	1	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATAACAGTATTTCT	-1	True	NA	16	True	AATAAA	-17	NA	4375602	4397329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77870_7	chr18	+	1918	9	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	68.9746330182336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCTAGTATCTATTTT	-1	True	NA	16	True	AATAAA	-18	NA	4375602	4396783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4387127_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77871_6	chr18	+	2452	9	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	68.9746330182336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	10	True	NA	15	True	AATAAA	-16	NA	4375613	4397328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4387127_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77873_24	chr18	+	2080	9	NIC	ENSMUSG00000024234.8	novel	2110	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_2	76.754376911027	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-1	True	NA	18	True	AATAAA	-20	NA	4375602	4396785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_4375779_4379568_4379742_4380672_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77874_15	chr18	+	2624	9	NIC	ENSMUSG00000024234.8	novel	2626	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	50	junction_2	76.754376911027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATAACAGTATTTCT	-1	True	NA	16	True	AATAAA	-17	NA	4375602	4397329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_4375779_4379568_4379742_4380672_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77875_37	chr18	+	2076	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	7	543	0	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-1	True	NA	18	True	AATAAA	-20	NA	4375602	4396785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77876_26	chr18	+	2619	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	7	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	-1	True	NA	15	True	AATAAA	-16	NA	4375602	4397328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_77880_9	chr18	+	6702	4	FSM	ENSMUSG00000033960.7	ENSMUST00000037029.7	6782	4	77	3	77	-3	multi-exon	TRUE	canonical	3	21	junction_2	13.6950923894494	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTTTGGTATTGTGT	11	True	NA	11	True	AATAAA	-16	NA	4634954	4682866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_4635032_4649074_4649406_4672514_4676168_4680225
Isoform_77882_11	chr18	+	6798	35	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	19.7669816616964	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTGATCAGTTCACA	-6	True	NA	11	True	AATAAA	-17	NA	4920541	5119288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
Isoform_77884_3	chr18	+	6883	36	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	26.8421538720311	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-5	True	NA	13	True	AATAAA	-19	NA	4920542	5119290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054014_5054099_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
Isoform_77886_4	chr18	+	7750	36	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	29.912716564112	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTGATCAGTTCACA	-31	True	NA	11	True	AATAAA	-17	NA	4920516	5119288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5055979_5056850_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
Isoform_77888_30	chr18	+	6701	34	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	17.6671084720473	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAATTCATTGATCAGTT	-21	True	NA	7	True	AATAAA	-13	NA	4920526	5119284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
Isoform_77891_4	chr18	+	2207	4	NIC	ENSMUSG00000024238.16	novel	266	3	NA	NA	2	708	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTTTGGGTTTTC	7	True	NA	NA	False	AGTAAA	-12	NA	5591892	5643581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_5591968_5633203_5633358_5641381_5641519_5641740
Isoform_77895_80	chr18	+	5216	8	FSM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	29	556	2	-556	multi-exon	FALSE	canonical	3	32	junction_5	9.45666809339164	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTCGTTCTTTGGAT	7	True	NA	NA	False	AATAAA	-18	NA	5591892	5774911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
Isoform_77896_6	chr18	+	5773	8	FSM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	29	-1	2	1	multi-exon	FALSE	canonical	3	32	junction_5	9.45666809339164	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTTGTGATGTGTGG	7	True	NA	NA	False	AATAAA	-20	NA	5591892	5775468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
Isoform_77900_956	chr18	+	2213	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	56	4246	-2	943	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	956	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTGTCTTGTCTGTC	5	True	NA	19	True	ATTAAA	-16	NA	6765200	6790183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
Isoform_77914_133	chr18	+	3075	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-4	-1	1	1	multi-exon	TRUE	canonical	3	146	junction_1	117.532571338518	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACACATTTTGTTACT	3	True	NA	NA	False	AATAAA	-9	NA	7868845	7927068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77915_97	chr18	+	3527	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-4	-453	1	1	multi-exon	FALSE	canonical	3	146	junction_1	117.532571338518	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACCTTGGCTTTTTTT	3	True	NA	NA	False	AATAAA	-23	NA	7868845	7927520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77923_14	chr18	+	3215	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	160.217733794428	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCTACCTTGGCTTTT	3	True	NA	NA	False	AATAAA	-20	NA	7868845	7927517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77925_14	chr18	+	3666	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	144.918748914632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACCTTGGCTTTTTTT	8	True	NA	NA	False	AATAAA	-23	NA	7869192	7927520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77926_18	chr18	+	3216	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	144.918748914632	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	12	True	NA	NA	False	AATAAA	-15	NA	7869196	7927074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77928_21	chr18	+	3719	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	152.096862628069	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACCTTGGCTTTTTTT	11	True	NA	NA	False	AATAAA	-23	NA	7869195	7927520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77929_27	chr18	+	3267	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	152.096862628069	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACACATTTTGTTACT	11	True	NA	NA	False	AATAAA	-9	NA	7869195	7927068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77933_357	chr18	+	3254	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	0	1954	0	7	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	12	True	NA	NA	False	AATAAA	-15	NA	7869196	7927074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77935_31	chr18	+	3752	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-52	1508	-51	1	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACCTTGGCTTTTTTT	-1	True	NA	NA	False	AATAAA	-23	NA	7869144	7927520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77936_242	chr18	+	3699	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	0	1509	0	0	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	12	True	NA	NA	False	AATAAA	-22	NA	7869196	7927519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77937_45	chr18	+	3299	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-51	1960	-50	1	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACACATTTTGTTACT	0	True	NA	NA	False	AATAAA	-9	NA	7869145	7927068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_7794_278	chr10	+	1875	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-31	3544	-31	6	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	NA	False	NA	16	True	AGTAAA	-19	NA	85857804	85884193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
Isoform_77941_22	chr18	+	5212	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-4	0	-3	0	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGCAGTTATTTCAGAAT	8	True	NA	NA	False	AATAAA	-17	NA	7869192	7929028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77948_63	chr18	+	3391	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	-296	-1	0	1	multi-exon	FALSE	canonical	3	106	junction_6	129.708862029118	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACCTTGGCTTTTTTT	12	True	NA	NA	False	AATAAA	-23	NA	7869196	7927520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_77949_69	chr18	+	2940	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	-297	451	0	1	multi-exon	FALSE	canonical	3	106	junction_6	129.708862029118	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACACATTTTGTTACT	11	True	NA	NA	False	AATAAA	-9	NA	7869195	7927068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_7795_48	chr10	+	1933	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-83	3538	-83	12	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTTTAAGGATGTATT	NA	False	NA	22	True	AGTAAA	-25	NA	85857752	85884199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
Isoform_77956_27	chr18	+	3350	10	FSM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	7	4667	1	-22	multi-exon	FALSE	canonical	3	13	junction_7	3.52066211505664	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTGTCCAGCTGAAGAA	7	False	NA	NA	False	AATAAA	-26	NA	9707601	9877977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
Isoform_77968_874	chr18	+	2099	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	271	1764	0	0	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	10	True	NA	14	True	AATAAA	-14	NA	9958176	9993725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
Isoform_77969_13	chr18	+	3860	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	270	4	-1	-4	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAGCTTGTTTACACAT	9	True	NA	NA	False	ATTAAA	-20	NA	9958175	9995485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
Isoform_7797_22	chr10	+	1954	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-110	3544	-110	6	multi-exon	TRUE	canonical	3	208	junction_3	24.7878498462452	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	NA	False	NA	16	True	AGTAAA	-19	NA	85857725	85884193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
Isoform_77976_62	chr18	+	2296	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	182.47716815401	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	10	True	NA	14	True	AATAAA	-14	NA	9958176	9993725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
Isoform_77978_29	chr18	+	1980	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	237.141378171329	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	10	True	NA	14	True	AATAAA	-14	NA	9958176	9993725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
Isoform_7798_11	chr10	+	5392	10	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-46	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	80.0888395609664	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGCCCTACCCTGTTCC	NA	False	NA	7	True	AATAAA	-24	NA	85857789	85887741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585_85887173_85887218
Isoform_77986_434	chr18	+	557	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	42	259	21	16	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTCTGTTGATTGT	10	True	NA	-13	True	AATAAA	-15	NA	10617816	10627971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
Isoform_77987_125	chr18	+	827	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	32	-1	11	1	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	0	True	NA	9	True	AATAAA	-16	NA	10617806	10628231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
Isoform_77988_243	chr18	+	618	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	32	208	11	67	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATAGTGTGTTCAGTT	0	True	NA	-35	True	ATTAAA	-23	NA	10617806	10628022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
Isoform_77989_186	chr18	+	595	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	4	259	4	16	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTCTGTTGATTGT	-28	True	NA	-13	True	AATAAA	-15	NA	10617778	10627971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
Isoform_7799_5	chr10	+	2137	10	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-102	6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	100.668628874671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	NA	False	NA	16	True	AGTAAA	-19	NA	85857733	85884193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85868823_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
Isoform_77992_37	chr18	+	850	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	9	-1	9	1	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	-23	True	NA	9	True	AATAAA	-16	NA	10617783	10628231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
Isoform_77995_35	chr18	+	448	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	11	-20	11	20	multi-exon	FALSE	canonical	3	110	junction_2	847.378047600689	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCTGTTGATTGTCAAA	0	True	NA	-9	True	AATAAA	-19	NA	10617806	10627975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
Isoform_77998_15	chr18	+	9309	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	77	845	-30	105	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATCTGTGGTGTAAT	-1	True	NA	12	True	AATAAA	-18	NA	10725624	10817733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
Isoform_78_12	ERCC-00054	+	255	1	FSM	ERCC-00054A	DQ516731	256	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00054_+_0_300
Isoform_78001_3	chr18	+	4560	22	NIC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	3	-6	intron_retention	FALSE	canonical	2	4	junction_21	21.3926683352826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGCTTTATATTTTA	3	True	NA	NA	False	AATAAA	-12	NA	10725550	10818572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984_10812157_10817818
Isoform_78007_268	chr18	+	3266	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-48	-9	-2	9	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGGATGTGTTACTTT	3243	False	NA	18	True	ATTAAA	-40	NA	11790437	11875944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
Isoform_78008_64	chr18	+	3378	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-45	-124	1	124	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTAGTCTATAATTT	3246	False	NA	9	True	NA	NA	NA	11790440	11876059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
Isoform_78011_16	chr18	+	3202	19	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	-1	124	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	44.3982051133146	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTAGTCTATAATTT	3703	False	NA	9	True	NA	NA	NA	11790897	11876059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
Isoform_78012_35	chr18	+	3072	19	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	44.3982051133146	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3709	False	NA	9	True	ATTAAA	-31	NA	11790903	11875935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
Isoform_78014_79	chr18	+	3071	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	323	2	269	-2	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATGTGTGTGTGAACA	NA	False	NA	NA	False	ATTAAA	-23	NA	11972599	12078681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
Isoform_78015_44	chr18	+	3155	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	239	2	185	-2	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATGTGTGTGTGAACA	NA	False	NA	NA	False	ATTAAA	-23	NA	11972515	12078681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
Isoform_78017_4	chr18	+	3245	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	151	0	97	0	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTGTGTGAACATG	NA	False	NA	NA	False	ATTAAA	-25	NA	11972427	12078683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
Isoform_78018_5	chr18	+	3081	9	FSM	ENSMUSG00000040957.16	ENSMUST00000046948.10	3202	9	182	-61	182	-1	multi-exon	FALSE	canonical	3	8	junction_3	10.1357967126418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTGTGTGTGAACAT	NA	False	NA	NA	False	ATTAAA	-24	NA	11972512	12078682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
Isoform_78019_15	chr18	+	2992	9	FSM	ENSMUSG00000040957.16	ENSMUST00000046948.10	3202	9	270	-60	270	-2	multi-exon	FALSE	canonical	3	8	junction_3	10.1357967126418	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATGTGTGTGTGAACA	NA	False	NA	NA	False	ATTAAA	-23	NA	11972600	12078681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
Isoform_78022_532	chr18	+	3077	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	24	689	5	-3	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	532	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGGTTCATTGTGTGGT	5529	False	NA	7	True	ATTAAA	-19	NA	12261821	12289755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
Isoform_78041_9	chr18	+	1256	9	FSM	ENSMUSG00000024410.16	ENSMUST00000126523.9	1282	9	23	3	1	-3	multi-exon	FALSE	canonical	3	285	junction_6	11.1740491765519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCATTTGATTTGATG	NA	False	NA	NA	False	ATTAAA	-11	NA	12301796	12314174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722
Isoform_78048_9	chr18	+	2326	19	FSM	ENSMUSG00000024410.16	ENSMUST00000127123.8	2297	19	-20	-9	-7	9	multi-exon	FALSE	canonical	3	252	junction_9	24.871831952861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCTACAACATCCTCAAA	NA	False	NA	NA	False	AATAAA	-31	NA	12301788	12323040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
Isoform_7805_9	chr10	+	1731	9	FSM	ENSMUSG00000001786.15	ENSMUST00000120344.8	1655	9	-68	-8	-68	8	multi-exon	FALSE	canonical	3	21	junction_1	78.2747564672034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTTTTTTTAAGGATG	NA	False	NA	18	True	AGTAAA	-21	NA	85857984	85884195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_85858195_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
Isoform_78050_16	chr18	+	2075	19	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	65.1417258325602	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAATGTTGCTAACTC	NA	False	NA	NA	False	AATAAA	-43	NA	12301789	12323052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_12301960_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
Isoform_78053_30	chr18	+	5679	38	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1361	-5	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	19.91739698612	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTATGATGTTTTATA	NA	False	NA	NA	False	AATAAA	-14	NA	12635894	12716065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
Isoform_78054_7	chr18	+	6866	38	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1361	1182	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	19.91739698612	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGGTGTCTACTTGGC	NA	False	NA	12	True	GATAAA	-17	NA	12635894	12717252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
Isoform_78056_14	chr18	+	5550	38	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	20.7911806329277	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGATGTTTTATAAG	NA	False	NA	NA	False	AATAAA	-16	NA	12637256	12716067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
Isoform_78057_4	chr18	+	6779	38	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	-42	1183	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	20.7911806329277	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTGTCTACTTGGCT	NA	False	NA	13	True	GATAAA	-18	NA	12637213	12717253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
Isoform_78058_7	chr18	+	4922	31	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	20127	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_10	12.4134335835551	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	5329	False	NA	NA	False	AATAAA	-19	NA	12657382	12716070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
Isoform_78059_13	chr18	+	1982	14	FSM	ENSMUSG00000024424.16	ENSMUST00000169401.8	1950	14	-30	-2	0	2	multi-exon	FALSE	canonical	1	3	junction_1	13.7926315977239	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGACCTTGCAGGAGC	NA	False	NA	4	True	AATAAA	-18	NA	12732952	12870109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_12733061_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
Isoform_78062_50	chr18	+	2119	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	455	1811	437	2	multi-exon	FALSE	canonical	3	26	junction_4	8.52563138615225	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGACCTTGCAGGAGC	NA	False	NA	4	True	AATAAA	-18	NA	12776855	12870109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
Isoform_78063_9	chr18	+	2548	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	23	1814	5	-1	multi-exon	FALSE	canonical	3	26	junction_4	8.52563138615225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGTGACCTTGCAGG	NA	False	NA	1	True	AATAAA	-15	NA	12776423	12870106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
Isoform_78066_3	chr18	+	2515	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	-34	1904	-34	1	multi-exon	FALSE	canonical	3	26	junction_4	8.52563138615225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCCGACCTGGGAGAG	NA	False	NA	-89	True	AATAAA	-18	NA	12776366	12870016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
Isoform_78070_1811	chr18	+	3412	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	350	1	1	-1	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTATGGCTACATTGC	NA	False	NA	15	True	NA	NA	NA	13105329	13126006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
Isoform_78076_25	chr18	+	3539	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	221	3	-128	-3	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTTATGGCTACATT	NA	False	NA	13	True	NA	NA	NA	13105200	13126004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
Isoform_7808_3	chr10	+	4616	5	FSM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	107	-1	-75	1	multi-exon	FALSE	canonical	2	3	junction_1	4.15331193145904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCTGTCTCTTGCCTTC	NA	False	NA	20	True	AGTAAA	-22	NA	86136342	86185371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_86136839_86174236_86174320_86179796_86179909_86180417_86180540_86181568
Isoform_7809_6	chr10	+	2045	4	ISM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	37991	2084	35509	-2084	3prime_fragment	FALSE	canonical	3	9	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGATTATTTTAAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	86174226	86183286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_86174320_86179796_86179909_86180417_86180540_86181568
Isoform_78098_77	chr18	+	1661	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	29	2	-9	-2	multi-exon	FALSE	canonical	3	86	junction_2	7.18795288428261	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATAGAGTGTCTCCTTC	NA	False	NA	8	True	NA	NA	NA	14839236	14895353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
Isoform_78099_5	chr18	+	2175	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	12	-495	12	492	multi-exon	TRUE	canonical	3	86	junction_2	7.18795288428261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGGAAATGAAA	NA	False	NA	NA	False	AATAAA	-25	NA	14839219	14895850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
Isoform_78101_4	chr18	+	730	5	NNC	ENSMUSG00000036743.5	novel	1023	6	NA	NA	17	653	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	35.0142828000232	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTATTACACTTAT	NA	False	NA	NA	False	NA	NA	NA	14839224	14865181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14864991
Isoform_78102_5	chr18	+	1529	6	NIC	ENSMUSG00000036743.5	novel	1692	7	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	33.7792835921664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTATAGAGTGTCTCCT	NA	False	NA	6	True	NA	NA	NA	14839239	14895351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_14839390_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
Isoform_78104_4	chr18	+	1240	3	ISM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	2	100875	2	-100875	5prime_fragment	FALSE	canonical	3	102	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	14916303	14932541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_14916992_14929969_14930116_14932135
Isoform_78105_184	chr18	+	4422	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	1	711	1	-711	multi-exon	FALSE	canonical	3	88	junction_13	8.14912039825809	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTGCAGCAGTTTCT	NA	False	NA	19	True	ATTAAA	-25	NA	14916302	15032705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
Isoform_78106_36	chr18	+	4466	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	-56	724	-56	-724	multi-exon	FALSE	canonical	3	88	junction_13	8.14912039825809	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCAGTCACTGTCTT	NA	False	NA	6	True	ATTAAA	-12	NA	14916245	15032692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
Isoform_78110_6	chr18	+	4291	14	NIC	ENSMUSG00000054321.8	novel	5134	15	NA	NA	2	-718	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	28.1548969959414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCACTGTCTTTGCAGC	NA	False	NA	12	True	ATTAAA	-18	NA	14916303	15032698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
Isoform_78112_3	chr18	+	1088	7	FSM	ENSMUSG00000044393.16	ENSMUST00000121837.2	953	7	-138	3	34	-3	multi-exon	FALSE	canonical	3	147	junction_4	16.303544263612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTGTGTTCTT	NA	False	NA	NA	False	ACTAAA	-21	NA	20691164	20715970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764
Isoform_78115_179	chr18	+	5731	15	FSM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	39	-4	39	4	multi-exon	FALSE	canonical	3	147	junction_4	15.0483913303932	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTCCATGTCTTCCT	NA	False	NA	14	True	AATAAA	-23	NA	20691169	20737582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
Isoform_78116_70	chr18	+	5783	15	FSM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	-16	-1	-16	1	multi-exon	FALSE	canonical	3	147	junction_4	15.0483913303932	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCTCTCTCCATGTCTT	NA	False	NA	11	True	AATAAA	-20	NA	20691114	20737579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
Isoform_7812_10	chr10	+	1632	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	-6	-4	-6	4	multi-exon	FALSE	canonical	3	71	junction_1	95.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATGTGTATGAGTGTAT	NA	False	NA	5	True	AGTAAA	-14	NA	86521382	86525822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_86521473_86521743_86521861_86524397
Isoform_7813_6	chr10	+	491	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	-54	1228	32	97	multi-exon	FALSE	canonical	3	53	junction_1	104.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGGGGGCTCAATGGCT	NA	False	NA	NA	False	AGTAAA	-21	NA	86521420	86524590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_86521602_86521743_86521861_86524397
Isoform_78131_126	chr18	+	4878	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	-40	-3490	-40	3490	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTCACTGTGTCTATT	5301	False	NA	NA	False	AATAAA	-27	NA	21077641	21120409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
Isoform_78139_4	chr18	+	1038	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	-65	433	-65	-433	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTGTCTTTGTTATG	1154	False	NA	NA	False	NA	NA	NA	21094463	21116348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
Isoform_7814_4	chr10	+	660	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	-56	1061	30	264	multi-exon	FALSE	canonical	3	53	junction_1	104.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGTCTTACTATACA	NA	False	NA	NA	False	NA	NA	NA	86521418	86524757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_86521602_86521743_86521861_86524397
Isoform_78140_34	chr18	+	5058	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	-25	-3627	-25	3489	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTCACTGTGTCTAT	1194	False	NA	NA	False	AATAAA	-26	NA	21094503	21120408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
Isoform_78147_45	chr18	+	2485	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	-62	-1	-62	1	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGTAAAAAACCTTTTT	NA	False	NA	11	True	AATAAA	-22	NA	21134335	21160593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_78149_12	chr18	+	3181	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	-70	-689	-70	0	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21134327	21161281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_7815_13	chr10	+	1693	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	-27	-1	-17	1	multi-exon	FALSE	canonical	3	53	junction_1	104.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTATGTGTATGAGTG	NA	False	NA	2	True	AGTAAA	-11	NA	86521447	86525819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_86521602_86521743_86521861_86524397
Isoform_78154_17	chr18	+	2380	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	-73	695	-73	1	multi-exon	FALSE	canonical	3	116	junction_1	148.868416917611	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134324	21160585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
Isoform_78160_197	chr18	+	2215	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	51	5	-32	3	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTTTTGTAAAAAAC	NA	False	NA	5	True	AATAAA	-16	NA	21135015	21160587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_78163_20	chr18	+	2982	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	-22	-689	-22	0	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21134942	21161281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_78165_49	chr18	+	2926	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	32	-687	32	-1	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTGTGTCTTAATTAA	NA	False	NA	1	True	ATTAAA	-13	NA	21134996	21161279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_78166_54	chr18	+	2275	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	-11	7	-11	1	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134953	21160585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_7817_3	chr10	+	397	2	FSM	ENSMUSG00000097412.3	ENSMUST00000218536.2	204	2	-108	-85	0	85	multi-exon	FALSE	canonical	3	262	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACACTTAATTTAGGG	NA	False	NA	NA	False	AGTAAA	-9	NA	86521644	86524578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_86521861_86524397
Isoform_78173_29	chr18	+	2863	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-94	0	-11	0	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21134953	21161281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
Isoform_78175_62	chr18	+	2186	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-105	688	-22	1	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGTAAAAAACCTTTTT	NA	False	NA	11	True	AATAAA	-22	NA	21134942	21160593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
Isoform_78176_94	chr18	+	2104	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-32	697	-32	0	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGCAGTTTTGTAAAA	NA	False	NA	2	True	AATAAA	-13	NA	21135015	21160584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
Isoform_7818_87	chr10	+	5919	14	FSM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	30	3	30	-3	multi-exon	FALSE	canonical	3	23	junction_13	8.52632540148867	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATGTGTGTTAGACCTA	NA	False	NA	9	True	AATAAA	-19	NA	86614898	86674250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
Isoform_78181_16	chr18	+	2164	6	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_3	152.012367917877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGTAAAAAACCTTTTT	NA	False	NA	11	True	AATAAA	-22	NA	21135015	21160593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21157465_21157574_21159142
Isoform_78184_15	chr18	+	2051	5	FSM	ENSMUSG00000024317.16	ENSMUST00000234545.2	1769	5	-140	-142	-36	0	multi-exon	FALSE	canonical	3	50	junction_3	174.891930917353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGCAGTTTTGTAAAA	NA	False	NA	2	True	AATAAA	-13	NA	21135011	21160584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21159142
Isoform_78185_9	chr18	+	2121	5	FSM	ENSMUSG00000024317.16	ENSMUST00000234545.2	1769	5	-209	-143	-22	1	multi-exon	FALSE	canonical	3	50	junction_3	174.891930917353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134942	21160585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21159142
Isoform_7819_3	chr10	+	3287	16	NNC	ENSMUSG00000054027.9	novel	5952	14	NA	NA	33	21744	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	17.418253516227	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCACCAATTCTGCTGCTT	NA	False	NA	NA	False	TATAAA	-15	NA	86614901	86695997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86694036_86695138_86695165_86695262_86695367
Isoform_78190_5	chr18	+	6174	20	NIC	ENSMUSG00000024302.17	novel	3860	25	NA	NA	679	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	3.4472679776448	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTAGTGGGGTTTGTT	NA	False	NA	17	True	ATTAAA	-20	NA	23630570	23792772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_23630761_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23786385_23786435_23788869
Isoform_78193_43	chr18	+	4036	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	-13	3	-13	-3	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTCTGGACTTATTC	NA	False	NA	11	True	AATAAA	-15	NA	23937027	24026911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
Isoform_78194_392	chr18	+	2542	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	-6	1490	-6	3	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTGAAATTTCTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	23937034	24025424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
Isoform_78197_17	chr18	+	5494	4	FSM	ENSMUSG00000024276.8	ENSMUST00000060762.6	5472	4	-26	4	-13	-4	multi-exon	FALSE	canonical	3	23	junction_1	32.0659043568433	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGTGTGGATCTCT	NA	False	NA	18	True	GATAAA	-20	NA	24087735	24097726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24087919_24089395_24089911_24090111_24090254_24093072
Isoform_7820_478	chr10	+	1242	10	FSM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	24	1	-11	1	multi-exon	FALSE	canonical	3	484	junction_1	64.7921653547559	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTCCTATTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	87982877	88014251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
Isoform_78201_50	chr18	+	5658	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24.0554914035583	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	20	True	GATAAA	-22	NA	24087735	24097728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_24088081_24089395_24089911_24090111_24090254_24093072
Isoform_78205_4	chr18	+	4802	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-14	-1019	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	35.3647658929996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGAAGGATTGACTCTG	NA	False	NA	NA	False	ATTAAA	-21	NA	24087734	24096711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_24088241_24089395_24089911_24090111_24090254_24093072
Isoform_78206_268	chr18	+	2343	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	51	646	51	-646	multi-exon	FALSE	canonical	3	128	junction_1	18.5	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTCTTGCATCGTT	1110	False	NA	45	True	NA	NA	NA	24122739	24137787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24122789_24123234_24123448_24135706
Isoform_78207_70	chr18	+	3008	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	27	5	27	-5	multi-exon	FALSE	canonical	3	128	junction_1	18.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGAAAATTTCTTACTG	1086	False	NA	NA	False	AATAAA	-21	NA	24122715	24138428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24122789_24123234_24123448_24135706
Isoform_7821_7	chr10	+	1163	9	NIC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	178.136885568374	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTCCTATTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	87982862	88014251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88013995
Isoform_78214_26	chr18	+	4029	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	-60	8	-60	0	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24338340	24419867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
Isoform_7822_56	chr10	+	1288	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	-10	-1	-10	1	multi-exon	FALSE	canonical	3	51	junction_1	172.048514547568	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTCCTATTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	87982928	88014251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
Isoform_78222_209	chr18	+	3914	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	194	0	2	0	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24339017	24419867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
Isoform_78227_104	chr18	+	3952	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-36	192	-36	-192	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGATTTTTGTACCCTA	NA	False	NA	26	True	AATAAA	-19	NA	24338787	24419675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
Isoform_78229_45	chr18	+	4194	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-86	0	-86	0	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24338737	24419867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
Isoform_7823_16	chr10	+	1350	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	-72	-1	13	1	multi-exon	FALSE	canonical	3	51	junction_1	172.048514547568	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTCCTATTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	87982866	88014251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
Isoform_78233_162	chr18	+	4077	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	35	-4	35	-4	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24338858	24419871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
Isoform_78249_43	chr18	+	4206	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	2	13	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGCCTTACGTTGGTT	NA	False	NA	29	True	ATTAAA	-40	NA	24339017	24419888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
Isoform_7825_300	chr10	+	846	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	56	150	3	1	multi-exon	FALSE	canonical	3	318	junction_4	34.2377309736236	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTTTGTTGACCAAAT	NA	False	NA	15	True	AATAAA	-18	NA	88037010	88081870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
Isoform_78262_3	chr18	+	227	2	ISM	ENSMUSG00000024273.9	ENSMUST00000234955.2	458	3	-11	2107	4	-2107	5prime_fragment	FALSE	canonical	3	181	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	348	False	NA	NA	False	NA	NA	NA	24603914	24604222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_24604038_24604118
Isoform_78263_145	chr18	+	1044	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-17	38	1	-38	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGACAGTTTTTATG	342	False	NA	9	True	AATAAA	-19	NA	24603908	24610817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
Isoform_78265_4	chr18	+	1209	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-30	-114	-11	114	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCAGTCATGTGCATA	329	False	NA	131	True	TATAAA	-37	NA	24603895	24610969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
Isoform_78266_3	chr18	+	1278	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-40	-173	-21	173	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGATAAATACCTGCCC	319	False	NA	NA	False	AGTAAA	-26	NA	24603885	24611028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
Isoform_78267_4	chr18	+	841	4	NIC	ENSMUSG00000024273.9	novel	1065	5	NA	NA	1	-38	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	88.1375188113565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGACAGTTTTTATG	345	False	NA	9	True	AATAAA	-19	NA	24603911	24610817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_24604038_24604118_24604142_24608581_24608782_24610325
Isoform_78268_18	chr18	+	1008	4	NIC	ENSMUSG00000024273.9	novel	1146	5	NA	NA	-4	-38	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	89.4886709154976	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGACAGTTTTTATG	355	False	NA	9	True	AATAAA	-19	NA	24603921	24610817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_24604038_24606006_24606207_24608581_24608782_24610325
Isoform_78269_7	chr18	+	1121	4	FSM	ENSMUSG00000024273.9	ENSMUST00000234559.2	1023	4	32	-130	14	-11	multi-exon	FALSE	canonical	3	162	junction_1	19.3620476419435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTGTACCGAATGGT	373	False	NA	6	True	AATAAA	-37	NA	24603939	24610844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24604142_24606006_24606207_24608581_24608782_24610325
Isoform_7827_62	chr10	+	823	7	FSM	ENSMUSG00000020056.17	ENSMUST00000182183.8	838	7	17	-2	-2	1	multi-exon	FALSE	canonical	3	113	junction_4	103.215658803411	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTTTGTTGACCAAAT	NA	False	NA	15	True	AATAAA	-18	NA	88037030	88081870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081617
Isoform_78270_1697	chr18	+	2767	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	3	696	1	1	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	1697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCTGATTTTGCCTT	NA	False	NA	91	True	TTTAAA	-11	NA	24737020	24771868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
Isoform_7828_43	chr10	+	861	7	FSM	ENSMUSG00000020056.17	ENSMUST00000182183.8	838	7	-21	-2	-15	1	multi-exon	FALSE	canonical	3	113	junction_4	103.215658803411	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTTTGTTGACCAAAT	NA	False	NA	15	True	AATAAA	-18	NA	88036992	88081870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081617
Isoform_78292_51	chr18	+	2759	15	FSM	ENSMUSG00000039616.11	ENSMUST00000068006.9	2903	15	143	1	-44	-1	multi-exon	FALSE	canonical	2	8	junction_8	5.18878303533257	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCCTGCCATTATTGA	NA	False	NA	14	True	ATTAAA	-14	NA	24786890	24834631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24787125_24793046_24793137_24797073_24797141_24799066_24799709_24803621_24803699_24807287_24807488_24809616_24809734_24812442_24812869_24816185_24816349_24819683_24819763_24821994_24822120_24825574_24825681_24828930_24829070_24832909_24833015_24834442
Isoform_78296_90	chr18	+	4916	25	FSM	ENSMUSG00000034295.11	ENSMUST00000234834.2	4956	25	39	1	39	-1	multi-exon	FALSE	canonical	3	28	junction_12	8.53414302799187	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAAGAAATGTTTATTC	NA	False	NA	NA	False	AATAAA	-15	NA	24842540	25266557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
Isoform_78297_9	chr18	+	4842	24	NIC	ENSMUSG00000034295.11	novel	4956	25	NA	NA	9	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_10	12.8794028205205	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	24842510	25266558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
Isoform_78299_3	chr18	+	533	5	ISM	ENSMUSG00000033632.17	ENSMUST00000162149.2	1427	6	-2	86858	-2	14817	5prime_fragment	FALSE	canonical	3	40	junction_3	4.32290411644765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATATTTGTTATACTTT	NA	False	NA	NA	False	AAGAAA	-14	NA	25302074	25337107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917
Isoform_7830_9	chr10	+	5201	22	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	50.8812587730597	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGAGTTTATTGTT	NA	False	NA	13	True	CATAAA	-15	NA	88215095	88283182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_88215159_88215330_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
Isoform_78300_10	chr18	+	4548	11	FSM	ENSMUSG00000033632.17	ENSMUST00000097643.10	5351	11	-4	807	2	-802	multi-exon	FALSE	canonical	3	22	junction_9	9.53100204595508	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCTCTGTTATGGCC	NA	False	NA	NA	False	NA	NA	NA	25302072	25599571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
Isoform_78302_319	chr18	+	3120	25	FSM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	131	6	6	0	multi-exon	FALSE	canonical	3	114	junction_11	21.8495089571063	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATGCCTTGTTTTC	NA	False	NA	6	True	AGTAAA	-17	NA	30405930	30481173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
Isoform_78307_6	chr18	+	1896	12	ISM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	-22	45312	-22	30474	5prime_fragment	FALSE	canonical	3	116	junction_5	28.8610235037836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGTTTTAAGTCTTGT	6783	False	NA	NA	False	AATAAA	-13	NA	31767401	31810802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408
Isoform_78308_163	chr18	+	4031	21	FSM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	1	-2	1	2	multi-exon	FALSE	canonical	3	64	junction_13	32.249767441022	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	6806	False	NA	10	True	AATAAA	-22	NA	31767424	31856116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
Isoform_78310_216	chr18	+	4041	21	FSM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	-24	-2	-12	2	multi-exon	FALSE	canonical	3	84	junction_13	29.4439722184355	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	6793	False	NA	10	True	AATAAA	-22	NA	31767411	31856116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
Isoform_78313_15	chr18	+	3958	21	NIC	ENSMUSG00000024260.15	novel	400	3	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	43.0866568672948	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	7521	False	NA	10	True	AATAAA	-22	NA	31768139	31856116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_31768185_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
Isoform_78314_22	chr18	+	3955	21	NIC	ENSMUSG00000024260.15	novel	400	3	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	41.2439086411557	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	7521	False	NA	10	True	AATAAA	-22	NA	31768139	31856116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_31768185_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
Isoform_78327_7	chr18	+	4809	9	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	35	1331	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	37.6345502829514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTCTGCCTCTG	6956	False	NA	6	True	AATAAA	-13	NA	31892967	31917127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913094_31913223_31913696
Isoform_7833_6	chr10	+	3951	20	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	23	1	intron_retention	FALSE	canonical	3	5	junction_19	54.0120023595864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGTCCGAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	88215110	88276725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88276483
Isoform_78330_70	chr18	+	4637	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	79	-1331	79	1331	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTCTGCCTCTG	7000	False	NA	6	True	AATAAA	-13	NA	31893011	31917127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
Isoform_78331_40	chr18	+	4767	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	-52	-1330	2	1330	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGTCTTCTGCCTCT	6869	False	NA	5	True	AATAAA	-12	NA	31892880	31917126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
Isoform_7834_140	chr10	+	5358	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	25	7	25	2	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGAGTTTATTGTTAG	NA	False	NA	15	True	CATAAA	-17	NA	88215112	88283184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
Isoform_78341_5	chr18	+	4549	7	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	55	1330	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	37.8832270126093	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGTCTTCTGCCTCT	6976	False	NA	5	True	AATAAA	-12	NA	31892987	31917126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_31893248_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
Isoform_78342_865	chr18	+	1045	4	FSM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	-30	0	-30	0	multi-exon	FALSE	canonical	3	694	junction_1	16.2138486760204	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	21	True	AATAAA	-20	NA	31922181	31929754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31922298_31924892_31925074_31928340_31928437_31929102
Isoform_78344_15	chr18	+	930	3	FSM	ENSMUSG00000024258.5	ENSMUST00000234146.2	706	3	-12	-212	-11	0	multi-exon	FALSE	canonical	3	63	junction_2	315.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	21	True	AATAAA	-20	NA	31922200	31929754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31922298_31924892_31925074_31929102
Isoform_78345_22	chr18	+	2495	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-71	-8	7	8	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTAGAATCTGGGATTTT	5662	False	NA	15	True	AATAAA	-26	NA	31937157	31968483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
Isoform_78346_10	chr18	+	2530	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-106	-8	-20	8	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTAGAATCTGGGATTTT	5627	False	NA	15	True	AATAAA	-26	NA	31937122	31968483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
Isoform_78347_173	chr18	+	1170	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-78	1324	0	-1324	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTAAAGCCTGCAGAAA	5655	False	NA	NA	False	AATAAA	-31	NA	31937150	31967151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
Isoform_7835_180	chr10	+	4803	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	9	578	9	-569	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88215096	88282613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
Isoform_78355_21	chr18	+	3388	16	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	0	17791	0	3236	5prime_fragment	FALSE	canonical	3	169	junction_7	105.765442791532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTGCGTGTGTGTGT	5655	False	NA	NA	False	TTTAAA	-26	NA	31937150	32022659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122
Isoform_78356_239	chr18	+	4572	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	0	3	0	-3	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGCAGCACCCACTGTG	5655	False	NA	36	True	AATACA	-19	NA	31937150	32040447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
Isoform_78358_36	chr18	+	4578	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-30	27	-22	-27	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGAATGTGATTTACT	5625	False	NA	12	True	NA	NA	NA	31937120	32040423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
Isoform_78359_17	chr18	+	4507	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-58	126	-50	-126	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGAGCACCTCCACAA	5597	False	NA	28	True	GATAAA	-29	NA	31937092	32040324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
Isoform_78361_8	chr18	+	5021	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	0	-446	0	446	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGACTCTGTGATG	5655	False	NA	NA	False	AAAACA	-18	NA	31937150	32040896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
Isoform_78379_278	chr18	+	2768	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	36	6809	9	0	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTGTCTCATCATTGT	NA	False	NA	17	True	AATAAA	-18	NA	32200829	32230572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
Isoform_7838_36	chr10	+	4906	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	-92	576	2	-567	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88214995	88282615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
Isoform_78383_15	chr18	+	4378	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	47	5188	-6	689	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGTTCTGACATGTAAA	NA	False	NA	5	True	AATAAA	-18	NA	32200840	32232193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
Isoform_78385_6	chr18	+	3721	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	10	5882	10	-5	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATACTTTTTATTT	NA	False	NA	NA	False	AATAAA	-29	NA	32200803	32231499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
Isoform_78387_5	chr18	+	3756	14	NNC	ENSMUSG00000024384.5	novel	9613	14	NA	NA	-5	4229	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	58.1131318608329	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAAGGGTTTGGTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	32200788	32241610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32240293
Isoform_78388_16	chr18	+	2800	14	NIC	ENSMUSG00000024384.5	novel	2936	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	55.8815314941366	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTGTCTCATCATTGT	NA	False	NA	17	True	AATAAA	-18	NA	32200794	32230572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216321_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
Isoform_7839_39	chr10	+	5393	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	-10	7	-8	2	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGAGTTTATTGTTAG	NA	False	NA	15	True	CATAAA	-17	NA	88215077	88283184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
Isoform_78391_9	chr18	+	642	3	FSM	ENSMUSG00000024383.10	ENSMUST00000234576.2	2989	3	0	2347	0	-2347	multi-exon	FALSE	canonical	3	11	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGGTATTTATTTC	NA	False	NA	NA	False	AAGAAA	-27	NA	32296141	32330002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32296604_32324953_32325024_32329892
Isoform_78395_220	chr18	+	2675	15	FSM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	33	0	-21	0	multi-exon	FALSE	canonical	3	78	junction_6	14.4393524078881	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTCTCTATTTTATTG	NA	False	NA	NA	False	TATAAA	-24	NA	32373385	32403204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
Isoform_78400_4	chr18	+	2193	16	NIC	ENSMUSG00000024381.17	novel	2406	19	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	9.63788819653397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAACGAGGCGTGTCTTT	NA	False	NA	13	True	AAAAAG	-20	NA	32510285	32568787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
Isoform_78401_3	chr18	+	2144	15	NIC	ENSMUSG00000024381.17	novel	2406	19	NA	NA	-27	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	10.3903408834104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACCCAGAACGAGGCG	NA	False	NA	6	True	AAAAAG	-13	NA	32510255	32568780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32565035_32565147_32565376_32565479_32568187
Isoform_78402_4	chr18	+	1961	14	NIC	ENSMUSG00000024381.17	novel	2406	19	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	10.0660540325881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACCCAGAACGAGGCG	NA	False	NA	6	True	AAAAAG	-13	NA	32510309	32568780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
Isoform_78403_17	chr18	+	2130	15	FSM	ENSMUSG00000024381.17	ENSMUST00000091967.13	2091	15	-40	1	-25	-1	multi-exon	FALSE	canonical	3	7	junction_10	7.8846919627173	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGAGGCGTGTCTTTCT	NA	False	NA	15	True	AAAAAG	-22	NA	32510257	32568789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
Isoform_78405_3	chr18	+	2199	15	FSM	ENSMUSG00000024381.17	ENSMUST00000091967.13	2091	15	-107	-1	-92	1	multi-exon	FALSE	canonical	3	7	junction_10	7.8846919627173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCGTGTCTTTCTTT	NA	False	NA	17	True	AAAAAG	-24	NA	32510190	32568791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
Isoform_78406_9	chr18	+	2000	14	NIC	ENSMUSG00000024381.17	novel	2091	15	NA	NA	9	2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	8.76518125122715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGAGGCGTGTCTTTCTTTG	NA	False	NA	18	True	AAAAAG	-25	NA	32510318	32568792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32565035_32565147_32565376_32565479_32568187
Isoform_78407_3	chr18	+	2084	14	NIC	ENSMUSG00000024381.17	novel	2091	15	NA	NA	-49	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	8.76518125122715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCGTGTCTTTCTTT	NA	False	NA	17	True	AAAAAG	-24	NA	32510233	32568791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32565035_32565147_32565376_32565479_32568187
Isoform_78409_6	chr18	+	2067	14	FSM	ENSMUSG00000024381.17	ENSMUST00000234857.2	1530	14	-91	-446	-91	-1	multi-exon	FALSE	canonical	2	3	junction_10	8.17631157710597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGAGGCGTGTCTTTCT	NA	False	NA	15	True	AAAAAG	-22	NA	32510191	32568789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568187
Isoform_78410_7	chr18	+	1960	14	FSM	ENSMUSG00000024381.17	ENSMUST00000234857.2	1530	14	7	-437	7	-4	multi-exon	FALSE	canonical	2	3	junction_10	8.17631157710597	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACCCAGAACGAGGCG	NA	False	NA	6	True	AAAAAG	-13	NA	32510289	32568780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568187
Isoform_78411_7	chr18	+	1930	13	FSM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	-41	-3	-26	-1	multi-exon	FALSE	canonical	3	6	junction_10	7.81024967590665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGAGGCGTGTCTTTCT	NA	False	NA	15	True	AAAAAG	-22	NA	32510256	32568789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
Isoform_78412_9	chr18	+	1856	13	FSM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	24	6	12	-4	multi-exon	FALSE	canonical	3	6	junction_10	7.81024967590665	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACCCAGAACGAGGCG	NA	False	NA	6	True	AAAAAG	-13	NA	32510321	32568780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
Isoform_78415_241	chr18	+	2861	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	31	1563	3	-369	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATGTGCCAAGTGTGC	8995	False	NA	11	True	AATAAA	-22	NA	32970308	32999084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
Isoform_78416_780	chr18	+	2831	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	56	1568	28	-374	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGCTATGTGCCAAG	9020	False	NA	6	True	AATAAA	-17	NA	32970333	32999079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
Isoform_78417_236	chr18	+	3175	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	77	1203	-9	-9	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAATCAGTGGGTTC	9041	False	NA	5	True	TATAAA	-18	NA	32970354	32999444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
Isoform_78418_19	chr18	+	3231	24	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	3	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	158.489013770111	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATTGTTGATTCTTGA	8995	False	NA	50	True	ATTAAA	-43	NA	32970308	32999489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32999191_32999225
Isoform_78419_80	chr18	+	3222	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	31	1202	3	-8	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATCAGTGGGTTCT	8995	False	NA	6	True	TATAAA	-19	NA	32970308	32999445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
Isoform_7842_5	chr10	+	5248	21	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	46	1	intron_retention	FALSE	canonical	2	9	junction_12	52.1003598835939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215133	88283183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
Isoform_78420_52	chr18	+	3182	24	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	-6	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	158.489013770111	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATTGTTGATTCTTGA	9044	False	NA	50	True	ATTAAA	-43	NA	32970357	32999489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32999191_32999225
Isoform_78428_19	chr18	+	2928	24	FSM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	-30	8	28	-8	multi-exon	FALSE	canonical	3	29	junction_23	153.127237455201	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATCAGTGGGTTCT	9020	False	NA	6	True	TATAAA	-19	NA	32970333	32999445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32998972_32999240
Isoform_78438_4	chr18	+	839	2	ISM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	-1	-1	-1	1	intron_retention	FALSE	canonical	3	377	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGTGTATGTTGTGTGA	NA	False	NA	16	True	AATAAA	-20	NA	33927943	33929040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_33928178_33928435
Isoform_78439_128	chr18	+	434	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	-1	-3	-1	3	multi-exon	FALSE	canonical	3	377	junction_1	24	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTATGTTGTGTGATT	NA	False	NA	18	True	AATAAA	-22	NA	33927943	33929042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_33928178_33928435_33928499_33928905
Isoform_78443_4	chr18	+	1063	5	ISM	ENSMUSG00000005871.16	ENSMUST00000170023.8	1825	11	-103	27502	-14	-3891	5prime_fragment	FALSE	canonical	3	88	junction_2	8.5146931829632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGTTGTTGTTGTTCTT	NA	False	NA	NA	False	AATACA	-14	NA	34353962	34405753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491
Isoform_78445_7	chr18	+	9896	16	FSM	ENSMUSG00000005871.16	ENSMUST00000079362.13	12811	16	-67	2982	-7	-2619	multi-exon	FALSE	canonical	3	36	junction_11	20.0838243370131	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCATTCCTAAAATTTA	NA	False	NA	15	True	AATAAA	-26	NA	34353969	34452623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
Isoform_78447_9	chr18	+	9787	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-7	-2782	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_11	14.6799182559032	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTGGTATTTGTTTGAG	NA	False	NA	21	True	AATAAA	-26	NA	34353969	34452460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
Isoform_78449_5	chr18	+	9621	15	NIC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	-8	-2790	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	28.5999857285536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTACTGAAATTGGTATT	NA	False	NA	13	True	AATAAA	-18	NA	34353968	34452452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
Isoform_78450_3	chr18	+	9849	16	NNC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	-11	-2619	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	24.5586825560511	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCATTCCTAAAATTTA	NA	False	NA	15	True	AATAAA	-26	NA	34353965	34452623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
Isoform_78451_4	chr18	+	9681	16	NNC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	-7	-2783	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	24.5586825560511	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTGGTATTTGTTTGA	NA	False	NA	20	True	AATAAA	-25	NA	34353969	34452459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
Isoform_78452_9	chr18	+	1032	6	FSM	ENSMUSG00000014504.17	ENSMUST00000142010.2	956	6	-30	-46	1	0	multi-exon	FALSE	canonical	3	34	junction_2	757.224141189384	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGCTTTCACTTAG	NA	False	NA	4	True	AATAAA	-14	NA	34464198	34469652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34464313_34464802_34464879_34465958_34466116_34467345_34467418_34467509_34467622_34469151
Isoform_78453_507	chr18	+	833	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	0	43	0	3	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCATCTTTAAGTTA	NA	False	NA	-39	True	AATAAA	-15	NA	34464197	34469609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
Isoform_78459_149	chr18	+	551	2	ISM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	3373	1	3342	-1	3prime_fragment	FALSE	canonical	3	2090	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAGTAGCTTTCACTTA	NA	False	NA	3	True	AATAAA	-13	NA	34467570	34469651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_34467622_34469151
Isoform_7846_12	chr10	+	1169	8	FSM	ENSMUSG00000020059.10	ENSMUST00000125612.2	1169	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.98212288268514	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537
Isoform_78467_5752	chr18	+	2954	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	248	472	-24	0	multi-exon	FALSE	canonical	3	938	junction_13	99.0044268869321	5752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6225	False	NA	23	True	AATAAA	-20	NA	34758035	34765858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
Isoform_78475_94	chr18	+	2828	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-42	0	intron_retention	TRUE	canonical	3	10	junction_10	266.201994226384	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6207	False	NA	23	True	AATAAA	-20	NA	34758017	34765858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
Isoform_7848_6	chr10	+	1229	8	FSM	ENSMUSG00000020059.10	ENSMUST00000125612.2	1169	8	-60	0	35	0	multi-exon	FALSE	canonical	3	104	junction_4	7.98212288268514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295465	88309098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537
Isoform_7849_74	chr10	+	1043	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	97	-1	2	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295527	88309098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
Isoform_785_1223	SIRV4	-	617	2	FSM	SIRV4B	SIRV406	617	2	1	-1	1	1	multi-exon	FALSE	canonical	3	2584	junction_1	0	1223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAAAAATAGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	5157	3636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4_-_4104_5007
Isoform_7850_17	chr10	+	1099	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	40	0	40	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGGTTTCAGTATAT	NA	False	NA	3	True	AATAAA	-15	NA	88295470	88309097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
Isoform_78509_7	chr18	+	4273	5	FSM	ENSMUSG00000034300.18	ENSMUST00000049281.12	4475	5	201	1	201	-1	multi-exon	FALSE	canonical	3	4	junction_1	15.2868407462104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTGTACGATAGTGTC	4638	False	NA	25	True	AATAAA	-32	NA	34892159	34906812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34892198_34895547_34895778_34896125_34896184_34901220_34902006_34903650
Isoform_78510_82	chr18	+	4275	5	FSM	ENSMUSG00000034300.18	ENSMUST00000097622.4	4256	5	2	-21	2	-1	multi-exon	FALSE	canonical	3	31	junction_2	5.02493781056044	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTGTACGATAGTGTC	5089	False	NA	25	True	AATAAA	-32	NA	34892610	34906812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34892651_34895547_34895778_34896125_34896184_34901220_34902006_34903650
Isoform_78511_4	chr18	+	4454	6	NNC	ENSMUSG00000034300.18	novel	4256	5	NA	NA	-214	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.2761251631426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCTTGTGTACGATAGT	4873	False	NA	22	True	AATAAA	-29	NA	34892394	34906809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_34892651_34895547_34895778_34896125_34896184_34901220_34902006_34903650_34904333_34904366
Isoform_78513_3	chr18	+	4688	6	NNC	ENSMUSG00000034300.18	novel	4256	5	NA	NA	201	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	15.2761251631426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCTTGTGTACGATAG	4638	False	NA	21	True	AATAAA	-28	NA	34892159	34906808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_34892651_34895547_34895778_34896125_34896184_34901220_34902006_34903650_34904333_34904366
Isoform_78514_13	chr18	+	4185	5	NNC	ENSMUSG00000034300.18	novel	4256	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.9216833280907	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTGTACGATAGTGTC	5087	False	NA	25	True	AATAAA	-32	NA	34892608	34906812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_34892651_34895547_34895778_34901220_34902006_34903650_34904333_34904366
Isoform_78518_77	chr18	+	2068	7	FSM	ENSMUSG00000038773.12	ENSMUST00000224715.2	2032	7	-38	2	-19	-2	multi-exon	FALSE	canonical	3	241	junction_6	14.229273425661	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTAAGTCGTATTTTT	NA	False	NA	25	True	AATAAA	-34	NA	34910080	34937684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502
Isoform_7852_13	chr10	+	925	8	FSM	ENSMUSG00000020059.10	ENSMUST00000123244.8	927	8	0	2	0	-1	multi-exon	FALSE	canonical	3	14	junction_4	38.7767024521326	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGGTTTCAGTATA	NA	False	NA	2	True	AATAAA	-14	NA	88295525	88309096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88303144_88303245_88305407_88305507_88308537_88308643_88308766
Isoform_78523_166	chr18	+	6723	24	FSM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	-25	-335	-25	335	multi-exon	FALSE	canonical	3	208	junction_7	44.6966672190611	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910074	34972048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
Isoform_78527_13	chr18	+	6118	23	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-22	333	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	70.7726104979477	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCTTTGGAGTAGACAA	NA	False	NA	148	True	ATTAAA	-11	NA	34910077	34972046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
Isoform_7854_688	chr10	+	1744	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	335	1	335	-1	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	688	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGATGTCTTTAGTGTCT	NA	False	NA	13	True	AATAAA	-22	NA	88567264	88579955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
Isoform_78566_8	chr18	+	1906	8	FSM	ENSMUSG00000038555.8	ENSMUST00000043484.8	1926	8	17	3	17	-3	multi-exon	FALSE	canonical	2	3	junction_2	2.56347977784662	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGATCTCTGCGTT	NA	False	NA	13	True	AATAAA	-19	NA	34973658	34980513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34973841_34975506_34975580_34975909_34975987_34978304_34978426_34978627_34978742_34978997_34979146_34979241_34979373_34979453
Isoform_78576_4353	chr18	+	3668	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	59	6	5	-6	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	4353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251970	35387826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
Isoform_78577_558	chr18	+	3699	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	29	5	1	-5	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTAAGAAGCAGAAGTCG	NA	False	NA	28	True	AATAAA	-16	NA	35251940	35387827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
Isoform_78592_79	chr18	+	3687	19	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-340	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	425.561314147286	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTAAGAAGCAGAAGTCG	NA	False	NA	28	True	AATAAA	-16	NA	35251571	35387827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_35251579_35251959_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
Isoform_78628_93	chr18	+	721	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	39	430	0	4	multi-exon	FALSE	canonical	3	167	junction_1	16.2685791225499	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATTTCATTGGCAT	NA	False	NA	NA	False	NA	NA	NA	35686462	35690939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
Isoform_78634_10	chr18	+	2873	3	NIC	ENSMUSG00000117869.2	novel	1190	4	NA	NA	0	4	intron_retention	FALSE	canonical	3	167	junction_1	17.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATTTCATTGGCAT	NA	False	NA	NA	False	NA	NA	NA	35686464	35690939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_35686523_35687479_35689745_35690389
Isoform_78635_51	chr18	+	3741	15	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	315.986251638406	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTTAGGT	NA	False	NA	23	True	NA	NA	NA	35695273	35724463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_35695313_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_78658_989	chr18	+	3776	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	57	2429	-2	-13	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695267	35724459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_78661_29	chr18	+	3892	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	5	2365	5	51	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTCCGTTGTGGC	NA	False	NA	7	True	NA	NA	NA	35695215	35724523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_78662_256	chr18	+	3839	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	57	2366	-2	50	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35695267	35724522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_78664_58	chr18	+	3959	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	57	2246	-2	170	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTCTTGTTCTTGTTA	NA	False	NA	9	True	ACTAAA	-20	NA	35695267	35724642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_78665_89	chr18	+	3845	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	5	2412	5	4	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695215	35724476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_78666_57	chr18	+	4101	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	57	2104	-2	312	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCGTCTTGTCGCTGC	NA	False	NA	2	True	ATTAAA	-12	NA	35695267	35724784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_7867_16	chr10	+	6562	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTTTGTCCGATTGGT	NA	False	NA	20	True	TATAAA	-31	NA	89580871	89655732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
Isoform_78679_92	chr18	+	2683	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-4	-825	-2	-13	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695267	35724459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_7872_6	chr10	+	6418	21	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_17	30.3006188055624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTTTGTCCGATTGGT	NA	False	NA	20	True	TATAAA	-31	NA	89580866	89655732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
Isoform_78744_2085	chr18	+	1450	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	24	1	0	-1	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	2085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4664	False	NA	21	True	AATAAA	-15	NA	35731693	35750238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
Isoform_78754_3	chr18	+	1440	2	FSM	ENSMUSG00000073598.4	ENSMUST00000097617.3	2504	2	-34	1098	-34	1	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCACAGTGGTACTGTC	1308	False	NA	NA	False	AAGAAA	-24	NA	35860007	35862824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35860150_35861526
Isoform_78757_132	chr18	+	1911	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-163	732	-163	616	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTGAATAGGCTTT	NA	False	NA	NA	False	AATAAA	-26	NA	35904447	35939489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
Isoform_78761_246	chr18	+	2461	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	23	-4	-6	4	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCATCTCTCAGTGT	NA	False	NA	21	True	AATAAA	-32	NA	35904633	35940225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
Isoform_78762_68	chr18	+	2637	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-163	6	-163	1	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTCACCTGTCTCAT	NA	False	NA	11	True	AATAAA	-22	NA	35904447	35940215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
Isoform_78763_396	chr18	+	1722	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	24	734	-5	614	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTGTGAATAGGCT	NA	False	NA	NA	False	AATAAA	-24	NA	35904634	35939487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
Isoform_7877_104	chr10	+	6424	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	22	2	22	-2	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTTTGTCCGATTGG	NA	False	NA	19	True	TATAAA	-30	NA	89580874	89655731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
Isoform_78785_21	chr18	+	2302	3	FSM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	2	-2	2	2	multi-exon	FALSE	canonical	3	48	junction_1	140.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTCCTGGCTTCTTGCTC	NA	False	NA	36	True	AATAAA	-27	NA	35962842	35994743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35963040_35991445_35992510_35993702
Isoform_78786_18	chr18	+	2337	3	FSM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	-33	-2	-33	2	multi-exon	FALSE	canonical	3	48	junction_1	140.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTCCTGGCTTCTTGCTC	NA	False	NA	36	True	AATAAA	-27	NA	35962807	35994743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35963040_35991445_35992510_35993702
Isoform_78796_139	chr18	+	3779	2	FSM	ENSMUSG00000046668.10	ENSMUST00000237291.2	1169	2	-137	-2473	-32	-1	multi-exon	FALSE	canonical	3	389	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACTCCTGGCTTCTTG	NA	False	NA	33	True	AATAAA	-24	NA	35962808	35994740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35963293_35991445
Isoform_78800_369	chr18	+	2592	3	NIC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-32	5	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTTCTTGCTCTTG	NA	False	NA	39	True	AATAAA	-30	NA	35962808	35994746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_35963293_35991445_35992510_35993702
Isoform_78814_23	chr18	+	3381	2	FSM	ENSMUSG00000046668.10	ENSMUST00000235169.2	857	2	1	-2525	1	0	multi-exon	FALSE	canonical	3	58	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35963367	35994741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_35963453_35991445
Isoform_78815_62	chr18	+	2182	3	NIC	ENSMUSG00000046668.10	novel	857	2	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	135.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35963373	35994741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_35963453_35991445_35992510_35993702
Isoform_7882_4	chr10	+	6282	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	30.3158808478155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTTTGTCCGATTGG	NA	False	NA	19	True	TATAAA	-30	NA	89580874	89655731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
Isoform_78821_4	chr18	+	4767	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	-39	1229	-39	-1229	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATATTGATGTTTTTT	NA	False	NA	12	True	AGTAAA	-20	NA	36414110	36424359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36414603_36420084
Isoform_78823_6	chr18	+	5956	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	-8	9	-8	-9	multi-exon	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTACTCACTGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	36414141	36425579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36414603_36420084
Isoform_78826_18	chr18	+	917	4	FSM	ENSMUSG00000046727.14	ENSMUST00000235864.2	1101	4	64	120	26	2	multi-exon	FALSE	canonical	3	70	junction_2	406.851597295896	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGTGACTTACTCCA	NA	False	NA	14	True	AATAAA	-14	NA	36481775	36536030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36481870_36483746_36483862_36499567_36499795_36535549
Isoform_78827_12	chr18	+	989	4	FSM	ENSMUSG00000046727.14	ENSMUST00000235864.2	1101	4	-6	118	-6	-1	multi-exon	FALSE	canonical	3	70	junction_2	406.851597295896	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTTACTCCAGG	NA	False	NA	16	True	AATAAA	-16	NA	36481705	36536032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36481870_36483746_36483862_36499567_36499795_36535549
Isoform_78828_353	chr18	+	803	3	FSM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	27	1	27	-1	multi-exon	FALSE	canonical	3	759	junction_1	90	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTTACTCCAGG	NA	False	NA	16	True	AATAAA	-16	NA	36481776	36536032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36481870_36499567_36499795_36535549
Isoform_7883_81	chr10	+	3245	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-12	-1	-12	1	multi-exon	FALSE	canonical	3	50	junction_2	27	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGAGTACTGTCCATT	743	False	NA	14	True	AATAAA	-20	NA	90918906	90934520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_90919159_90929000_90929119_90931645
Isoform_78830_3	chr18	+	2611	10	ISM	ENSMUSG00000024483.20	ENSMUST00000006205.14	8200	34	-10	57350	-10	17566	5prime_fragment	FALSE	canonical	3	105	junction_2	7.96907603424049	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGGTGGTTGACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	36693653	36734611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818
Isoform_78831_3	chr18	+	7254	37	Fusion	ENSMUSG00000090264.2_ENSMUSG00000024483.20	novel	8223	34	NA	NA	12	-9	multi-exon	TRUE	non_canonical	0	0	junction_29	43.1618401420102	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36693675	36798961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36780764_36782300_36782329_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
Isoform_78833_3	chr18	+	1783	8	FSM	ENSMUSG00000117942.2	ENSMUST00000140061.8	2235	8	444	8	444	-8	multi-exon	FALSE	canonical	3	120	junction_2	28.281384950067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTGTCTTGGCTCCAT	NA	False	NA	25	True	AGTAAA	-7	NA	36781356	36798962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
Isoform_78834_3	chr18	+	1867	8	FSM	ENSMUSG00000117942.2	ENSMUST00000140061.8	2235	8	360	8	360	-8	multi-exon	FALSE	canonical	3	120	junction_2	28.281384950067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTGTCTTGGCTCCAT	NA	False	NA	25	True	AGTAAA	-7	NA	36781272	36798962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
Isoform_78835_3	chr18	+	2100	8	FSM	ENSMUSG00000117942.2	ENSMUST00000140061.8	2235	8	126	9	126	-9	multi-exon	FALSE	canonical	3	120	junction_2	28.281384950067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36781038	36798961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
Isoform_78836_56	chr18	+	2545	3	FSM	ENSMUSG00000033272.13	ENSMUST00000170288.2	403	3	16	-2158	7	-1	multi-exon	FALSE	canonical	3	17	junction_1	222	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812651	36816913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36812677_36813480_36813668_36814580
Isoform_78837_15	chr18	+	2439	4	NIC	ENSMUSG00000033272.13	novel	2362	4	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	190.025144535021	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGTTGTCCTGTCTTCT	NA	False	NA	17	True	AATAAA	-35	NA	36812648	36816912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_36812677_36813480_36813668_36814580_36814819_36814926
Isoform_78839_756	chr18	+	2464	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	7	-9	7	6	multi-exon	FALSE	canonical	3	269	junction_1	96	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTCTGTGTTTCC	NA	False	NA	25	True	AATAAA	-43	NA	36812651	36816920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36812677_36813568_36813668_36814580
Isoform_78842_278	chr18	+	2364	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	5	-7	1	-1	multi-exon	TRUE	canonical	3	118	junction_3	140.362229804017	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812636	36816913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
Isoform_78849_83	chr18	+	1746	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	74	3	0	-3	multi-exon	FALSE	canonical	3	53	junction_4	9.25845604107201	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGCCTCAGTGT	NA	False	NA	50	True	AATAAA	-17	NA	36868194	36875447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
Isoform_78850_43	chr18	+	1849	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	-29	3	0	-3	multi-exon	FALSE	canonical	3	53	junction_4	9.25845604107201	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGCCTCAGTGT	NA	False	NA	50	True	AATAAA	-17	NA	36868091	36875447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
Isoform_78852_6	chr18	+	1750	12	NIC	ENSMUSG00000006850.9	novel	1823	12	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	17.804261724014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGCCTCAGTGT	NA	False	NA	50	True	AATAAA	-17	NA	36868197	36875447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_36868310_36868440_36868554_36870509_36870633_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
Isoform_78858_962	chr18	+	1926	20	FSM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	66	4	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	168.043095646503	962	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877774	36890688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
Isoform_78873_84	chr18	+	1574	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	44	1	44	-1	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGTGCCAAGCTGGG	NA	False	NA	3	True	AATAAA	-18	NA	36893316	36896862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
Isoform_78879_233	chr18	+	2403	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	244	689	-17	179	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGAGTTCATTTCC	NA	False	NA	13	True	NA	NA	NA	36916304	36924926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
Isoform_78881_7	chr18	+	2854	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	209	273	-14	-273	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACATAAAGTGTGGCTAG	NA	False	NA	NA	False	AATAAA	-31	NA	36916269	36925342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
Isoform_78882_24	chr18	+	3074	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	244	18	-17	-18	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	36916304	36925597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
Isoform_78883_18	chr18	+	2161	12	FSM	ENSMUSG00000019143.16	ENSMUST00000019287.9	2002	12	20	-179	-18	179	multi-exon	FALSE	canonical	3	6	junction_9	36.3770429831556	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGAGTTCATTTCC	NA	False	NA	13	True	NA	NA	NA	36916303	36924926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36923186_36923304_36923521_36923669_36924122
Isoform_78885_11	chr18	+	2670	12	NIC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-17	175	intron_retention	FALSE	canonical	3	88	junction_9	17.4327515454756	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGGACCTGAGTTCAT	NA	False	NA	9	True	NA	NA	NA	36916304	36924922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
Isoform_78887_44	chr18	+	2257	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	52	1	52	-1	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGACTTTTCTTTGA	6668	False	NA	21	True	AATAAA	-21	NA	36926980	36932718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
Isoform_78888_229	chr18	+	1265	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	52	993	52	590	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCGTTTCTTCTGTTTC	6668	False	NA	29	True	ATTAAA	-26	NA	36926980	36931726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
Isoform_7889_10	chr10	+	3688	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-11	-445	-11	445	multi-exon	FALSE	canonical	3	50	junction_2	27	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGCACCTAATTATT	744	False	NA	NA	False	AATAAA	-12	NA	90918907	90934964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_90919159_90929000_90929119_90931645
Isoform_78893_6	chr18	+	2134	5	NIC	ENSMUSG00000001383.10	novel	2310	6	NA	NA	57	592	intron_retention	FALSE	canonical	3	554	junction_4	83.184659042398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTTTCTTCTGTTTCAC	6673	False	NA	31	True	ATTAAA	-28	NA	36926985	36931728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_36927013_36927349_36927444_36928093_36929164_36929551_36929698_36930931
Isoform_78897_5	chr18	+	2251	4	FSM	ENSMUSG00000102222.2	ENSMUST00000193404.2	4732	4	2478	3	2478	-3	multi-exon	FALSE	canonical	0	0	junction_1	104.703815063678	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	7975	False	NA	14	True	AATAAA	-17	NA	37882523	37974923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_37882659_37958073_37958133_37966317_37966407_37972955
Isoform_78898_13	chr18	+	4730	4	FSM	ENSMUSG00000102742.2	ENSMUST00000061279.10	4756	4	24	2	24	-2	multi-exon	FALSE	canonical	1	6	junction_1	101.88337559299	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGACCGCGTCTGTTT	NA	False	NA	15	True	AATAAA	-18	NA	37888807	37974924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_37891421_37958073_37958133_37966317_37966407_37972955
Isoform_78899_6	chr18	+	4693	4	FSM	ENSMUSG00000103081.4	ENSMUST00000195764.2	4615	4	-80	2	-80	-2	multi-exon	FALSE	canonical	3	10	junction_1	100.00333327778	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTGACCGCGTCTG	3862	False	NA	12	True	AATAAA	-15	NA	37894773	37974921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_37897353_37958073_37958133_37966317_37966407_37972955
Isoform_7890_41	chr10	+	1228	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020150.10	1328	3	105	-5	-12	5	multi-exon	FALSE	canonical	3	39	junction_2	32.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCTCCATAATATTTT	743	False	NA	17	True	AATAAA	-22	NA	90918906	90938474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_90919159_90929000_90929119_90937616
Isoform_78900_196	chr18	+	2283	4	FSM	ENSMUSG00000102428.2	ENSMUST00000044851.8	5080	4	2794	3	2601	-3	multi-exon	FALSE	canonical	3	109	junction_1	53.597263611743	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	False	NA	14	True	AATAAA	-17	NA	37901426	37974923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_37901594_37958073_37958133_37966317_37966407_37972955
Isoform_78902_103	chr18	+	4675	4	FSM	ENSMUSG00000102918.2	ENSMUST00000076807.7	4687	4	9	3	3	-3	multi-exon	FALSE	canonical	3	36	junction_1	87.788888185743	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	False	NA	14	True	AATAAA	-17	NA	37939471	37974923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_37942031_37958073_37958133_37966317_37966407_37972955
Isoform_78906_29	chr18	+	2185	3	FSM	ENSMUSG00000102543.6	ENSMUST00000192875.2	5777	3	5298	-1706	5298	-3	multi-exon	FALSE	canonical	3	212	junction_1	9.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	2315	False	NA	14	True	AATAAA	-17	NA	37958004	37974923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_37958133_37966317_37966407_37972955
Isoform_78911_1572	chr18	+	2390	13	FSM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	1	3	1	-3	multi-exon	FALSE	canonical	3	315	junction_6	27.9179104200551	1572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCTTGCCCTTGAGT	3968	False	NA	17	True	AATAAA	-18	NA	38383312	38395679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
Isoform_7892_54	chr10	+	4382	16	ISM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-210	-13	-195	13	intron_retention	FALSE	canonical	3	223	junction_1	19.4712323413	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACTGTTCTTTATTGG	NA	False	NA	28	True	TATAAA	-15	NA	92996541	93077203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
Isoform_78923_9	chr18	+	3183	11	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	92.6777211631792	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	974	False	NA	17	True	AATAAA	-22	NA	38429735	38450896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_38429852_38430518_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_78924_14	chr18	+	3026	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	96.6517229828602	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	979	False	NA	17	True	AATAAA	-22	NA	38429740	38450896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_38429852_38430518_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_78925_46	chr18	+	3156	11	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	89.3559734992575	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	967	False	NA	17	True	AATAAA	-22	NA	38429728	38450896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_78926_39	chr18	+	3011	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	92.9832057051696	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACACGGTGTCCTGTTGA	967	False	NA	24	True	AATAAA	-29	NA	38429728	38450903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_78931_13	chr18	+	1653	4	FSM	ENSMUSG00000060450.15	ENSMUST00000237416.2	618	4	-6	-1029	0	1	multi-exon	FALSE	canonical	0	0	junction_3	98.2694707876708	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	985	False	NA	17	True	AATAAA	-22	NA	38429746	38450896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_38429852_38432806_38432980_38433481_38433538_38449577
Isoform_78932_307	chr18	+	2993	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	41	6	-2	1	multi-exon	FALSE	canonical	3	120	junction_3	53.7248487666555	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	967	False	NA	17	True	AATAAA	-22	NA	38429728	38450896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_78936_263	chr18	+	2853	8	FSM	ENSMUSG00000060450.15	ENSMUST00000236649.2	2822	8	-20	-11	-4	4	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGTGTCCTGTTGATCC	965	False	NA	27	True	AATAAA	-32	NA	38429726	38450906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_78940_53	chr18	+	2510	6	NIC	ENSMUSG00000060450.15	novel	2886	8	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	90.4486594704421	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	964	False	NA	18	True	AATAAA	-23	NA	38429725	38450897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_38429852_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_78946_19	chr18	+	1771	8	FSM	ENSMUSG00000024425.5	ENSMUST00000025293.5	1392	8	-34	-345	-7	-13	multi-exon	FALSE	canonical	3	22	junction_7	234.910230357323	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTACTGTAGATTAGT	9095	False	NA	31	True	AATAAA	-16	NA	38551987	38598237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597313
Isoform_78947_521	chr18	+	1725	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	61	10	-1	-10	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTAGATTAGTGTT	9128	False	NA	34	True	AATAAA	-19	NA	38552020	38598240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
Isoform_78952_31	chr18	+	1780	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	4	12	4	-12	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTACTGTAGATTAGTG	9071	False	NA	32	True	AATAAA	-17	NA	38551963	38598238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
Isoform_78955_24	chr18	+	2655	21	NIC	ENSMUSG00000036452.19	novel	6415	22	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	6.07124369466422	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGACTTTGAGCGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	39126217	39440426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39440070
Isoform_78956_16	chr18	+	2718	21	NIC	ENSMUSG00000036452.19	novel	6415	22	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	6.07124369466422	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGACTTTGAGCGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	39126154	39440426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39440070
Isoform_78957_9	chr18	+	3972	23	FSM	ENSMUSG00000036452.19	ENSMUST00000155576.8	2280	23	-337	-1355	-6	6	multi-exon	FALSE	canonical	2	6	junction_21	7.92227219263608	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGGTAAAGTTTTATAT	NA	False	NA	NA	False	GATAAA	-27	NA	39126191	39505570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39490605_39490717_39496169_39496262_39504126
Isoform_78965_42	chr18	+	3744	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-38	2595	-19	-2595	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTAACTCTTAGCTAT	NA	False	NA	24	True	ATTAAA	-18	NA	42408398	42471901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
Isoform_78966_30	chr18	+	4120	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-42	2223	-23	-2223	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTGCTCATTCCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	42408394	42472273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
Isoform_78967_77	chr18	+	6405	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	7	-111	7	0	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	NA	False	NA	19	True	ACTAAA	-2	NA	42408443	42474607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
Isoform_78968_9	chr18	+	6340	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-27	-12	-8	12	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGGGGGAAAAGAGAAAAA	NA	False	NA	14	True	AATAAA	-25	NA	42408409	42474508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
Isoform_78971_5	chr18	+	3589	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	-29	2706	-29	-2595	multi-exon	TRUE	canonical	3	13	junction_8	26.3045239044415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTAACTCTTAGCTAT	NA	False	NA	24	True	ATTAAA	-18	NA	42408388	42471901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
Isoform_78973_6	chr18	+	6208	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	55	3	36	-3	multi-exon	FALSE	canonical	3	13	junction_8	26.3045239044415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTGTAATTCTGGCT	NA	False	NA	16	True	NA	NA	NA	42408472	42474604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
Isoform_7898_314	chr10	+	3837	17	FSM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-209	-13	-194	13	multi-exon	FALSE	canonical	3	213	junction_16	22.6329405955126	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACTGTTCTTTATTGG	NA	False	NA	28	True	TATAAA	-15	NA	92996542	93077203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
Isoform_78993_32	chr18	+	4299	23	FSM	ENSMUSG00000024498.17	ENSMUST00000173642.2	3526	23	-12	-761	10	51	multi-exon	FALSE	canonical	3	105	junction_21	184.268556260818	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644575	42708670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
Isoform_78995_30	chr18	+	4389	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	23	5	9	-5	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTATTCTCCCTTTCTT	NA	False	NA	NA	False	TATAAA	-20	NA	42644574	42708853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
Isoform_78996_410	chr18	+	4211	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	17	189	3	50	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644568	42708669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
Isoform_79_9	ERCC-00059	+	506	1	FSM	ERCC-00059A	DQ668356	509	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TT	NA	False	NA	NA	False	NA	NA	NA	1	507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00059_+_0_500
Isoform_79007_23	chr18	+	4236	22	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	10	51	combination_of_known_junctions	FALSE	canonical	3	105	junction_20	199.165913811801	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644575	42708670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
Isoform_79008_218	chr18	+	4141	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	10	-50	10	50	multi-exon	FALSE	canonical	3	254	junction_5	111.046881991346	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644575	42708669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
Isoform_79009_227	chr18	+	4090	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	10	1	10	-1	multi-exon	FALSE	canonical	3	254	junction_5	111.046881991346	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644575	42708618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
Isoform_79025_30	chr18	+	411	2	FSM	ENSMUSG00000024472.10	ENSMUST00000202306.2	398	2	-13	0	-13	0	multi-exon	FALSE	canonical	3	169	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCCCCTTTTTGTTTTTC	NA	False	NA	13	True	AATAAA	-14	NA	44513555	44529152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_44513754_44528939
Isoform_79030_3	chr18	+	2259	9	ISM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-17	11261	8	-11261	5prime_fragment	FALSE	canonical	3	47	junction_7	35.9609162842106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATCAAAAAAGC	NA	False	NA	NA	False	AAGAAA	-36	NA	44513576	44546775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582
Isoform_79032_34	chr18	+	2996	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	1	5619	1	-5619	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTCCCAGCATTCCAG	NA	False	NA	NA	False	AATACA	-36	NA	44513594	44552417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
Isoform_79033_22	chr18	+	8635	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-23	4	2	-4	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTTTGTGGTTTTTTTG	NA	False	NA	11	True	AATAAA	-16	NA	44513570	44558032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
Isoform_79034_34	chr18	+	1615	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-17	7018	8	-7018	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGTTGCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	44513576	44551018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
Isoform_79039_64	chr18	+	6450	30	FSM	ENSMUSG00000034653.12	ENSMUST00000037763.11	7215	30	747	18	747	-18	multi-exon	FALSE	canonical	3	27	junction_3	9.69634080312122	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTATCAAATGAAATACT	NA	False	NA	12	True	AATAAA	-30	NA	44961559	45022766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
Isoform_79041_3	chr18	+	2834	9	NNC	ENSMUSG00000054477.17	novel	1725	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.10863737011343	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATTTGTTTGGTCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	45692540	45818949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45808321_45808431_45810003_45810132_45816137_45816208_45818341
Isoform_79042_30	chr18	+	2728	8	FSM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	-682	-321	3	0	multi-exon	FALSE	canonical	2	15	junction_3	2.55550625999976	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTTGTTTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	45692538	45818950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45810003_45810132_45816137_45816208_45818341
Isoform_79043_20	chr18	+	2790	8	FSM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	-744	-321	-59	0	multi-exon	FALSE	canonical	2	15	junction_3	2.55550625999976	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTTGTTTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	45692476	45818950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45810003_45810132_45816137_45816208_45818341
Isoform_79048_1267	chr18	+	2828	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	33	4	12	-4	multi-exon	FALSE	canonical	3	1498	junction_1	106	1267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTAAATGTTTTTTTT	NA	False	NA	16	True	ATTAAA	-13	NA	46730803	46743274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_46730868_46731707_46731768_46740570
Isoform_79079_19	chr18	+	1249	7	NIC	ENSMUSG00000024480.10	novel	978	7	NA	NA	-5	-105	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	269.615157833037	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACCTTTCTGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	46874959	46923585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_46875149_46887437_46887530_46890448_46890503_46891069_46891182_46912254_46912327_46913727_46913836_46922963
Isoform_7908_14	chr10	+	3929	17	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-194	13	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	65.6229463964397	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACTGTTCTTTATTGG	NA	False	NA	28	True	TATAAA	-15	NA	92996542	93077203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_92997063_93044033_93044181_93047680_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
Isoform_79080_13	chr18	+	1360	7	NIC	ENSMUSG00000024480.10	novel	978	7	NA	NA	6	-5	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	269.615157833037	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACTGTCAGTGTTGACT	NA	False	NA	NA	False	AATAAA	-21	NA	46874948	46923685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_46875149_46887437_46887530_46890448_46890503_46891069_46891182_46912254_46912327_46913727_46913836_46922963
Isoform_79081_287	chr18	+	1193	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	19	308	-3	-105	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACCTTTCTGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	46874961	46923585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
Isoform_79082_239	chr18	+	1292	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	19	209	-3	-6	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAACTGTCAGTGTTGAC	NA	False	NA	NA	False	AATAAA	-20	NA	46874961	46923684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
Isoform_79087_6	chr18	+	1076	5	NIC	ENSMUSG00000024480.10	novel	1520	6	NA	NA	2	-105	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	260.700019179132	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACCTTTCTGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	46874966	46923585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_46875149_46887437_46887530_46912254_46912327_46913727_46913836_46922963
Isoform_79089_335	chr18	+	2245	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	3	9	3	1	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGGTTTTCAGGGTT	NA	False	NA	17	True	AATAAA	-13	NA	47054884	47067290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
Isoform_79092_10	chr18	+	2150	4	NIC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	135.151766544134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGGTTTTCAGGGTTT	NA	False	NA	18	True	AATAAA	-14	NA	47054872	47067291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_47054960_47059378_47059483_47061585_47061726_47065472
Isoform_79097_2040	chr18	+	1559	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	49	2	0	-2	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAAGCGTACAATGTTT	NA	False	NA	24	True	AATAAA	-25	NA	47091931	47221060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
Isoform_791_1064	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2658.88059152719	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
Isoform_7910_143	chr10	+	2054	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	-24	-1	-24	0	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289248	93320737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
Isoform_79104_39	chr18	+	1446	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234701.2	528	6	-17	-901	2	-6	multi-exon	FALSE	canonical	3	144	junction_2	502.986441169143	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAACTCAAGCGTACAAT	NA	False	NA	20	True	AATAAA	-21	NA	47091929	47221056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_47091996_47093482_47093574_47100806_47100963_47123545_47123657_47219318_47219379_47220094
Isoform_7911_539	chr10	+	2017	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	13	-1	13	0	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289285	93320737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
Isoform_79111_27	chr18	+	11389	43	FSM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-70	0	-70	0	multi-exon	TRUE	canonical	3	56	junction_4	23.9744407551836	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	NA	False	NA	14	True	AATAAA	-15	NA	49965666	50097321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
Isoform_79115_17	chr18	+	1744	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	35	-777	-29	-4	multi-exon	FALSE	canonical	3	36	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACTCGGGATTTAGATTG	NA	False	NA	7	True	AATAAA	-20	NA	50112528	50224845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_50112694_50223266
Isoform_79117_31	chr18	+	1704	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	74	-776	10	-5	multi-exon	FALSE	canonical	3	36	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGACTCGGGATTTAGATT	NA	False	NA	6	True	AATAAA	-19	NA	50112567	50224844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_50112694_50223266
Isoform_79119_14	chr18	+	3208	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	30	-2236	30	8	multi-exon	FALSE	canonical	3	36	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTGTGTTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	50112523	50226304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_50112694_50223266
Isoform_79122_444	chr18	+	2643	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	38	3	38	-3	multi-exon	FALSE	canonical	3	285	junction_3	18.279183363144	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTCCTGCTCCTCTTTG	NA	False	NA	11	True	AATAAA	-20	NA	50261305	50329333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
Isoform_79127_299	chr18	+	1997	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	1	658	1	-658	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGTGACTTATCTTT	NA	False	NA	10	True	AATAAA	-22	NA	52598765	52624345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
Isoform_79131_384	chr18	+	1464	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	0	1192	0	-1192	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATTGCTTGTTTTTC	NA	False	NA	3	True	TTTAAA	-37	NA	52598764	52623811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
Isoform_79132_11	chr18	+	1496	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	-32	1192	-32	-1192	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATTGCTTGTTTTTC	NA	False	NA	3	True	TTTAAA	-37	NA	52598732	52623811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
Isoform_7914_62	chr10	+	1935	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_16	100.405509988178	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289284	93320737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823_93318929_93320524
Isoform_79144_814	chr18	+	1998	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	39	30	-4	-30	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATAAATTATTTG	NA	False	NA	8	True	AATAAA	-19	NA	53309426	53353907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
Isoform_79145_71	chr18	+	2044	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	-9	32	-9	-32	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTAGTAATAAATTATT	NA	False	NA	6	True	AATAAA	-17	NA	53309378	53353905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
Isoform_79157_5	chr18	+	1946	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	-65	96	-65	1	multi-exon	TRUE	canonical	3	19	junction_3	2.70801280154532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACTAAATA	NA	False	NA	NA	False	AATAAA	-18	NA	53378668	53523896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
Isoform_79159_13	chr18	+	1993	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	-35	19	-35	-19	multi-exon	FALSE	canonical	3	19	junction_3	2.70801280154532	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAACAAAAGTA	NA	False	NA	NA	False	TTTAAA	-31	NA	53378698	53523973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
Isoform_79166_94	chr18	+	4276	12	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-22	29	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	36.435156938828	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTTCCCCTTTCCTCT	NA	False	NA	NA	False	TTTAAA	-3	NA	53995171	54088649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
Isoform_79173_5	chr18	+	4397	14	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-25	30	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	79.7783912847102	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCCCCTTTCCTCTA	NA	False	NA	NA	False	TTTAAA	-4	NA	53995168	54088650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54081716_54081741_54086316
Isoform_79175_5	chr18	+	2553	13	NNC	ENSMUSG00000073563.4	novel	2180	13	NA	NA	-23	287	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	70.1610745990174	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTTGTGGCATCTGC	NA	False	NA	NA	False	ATTAAA	-20	NA	53995170	54086832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
Isoform_79177_14	chr18	+	4292	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-22	24	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_11	65.9298343358722	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGCTCTTTCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	53995171	54088644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
Isoform_79178_126	chr18	+	4268	12	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-22	24	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_8	32.497425199977	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGCTCTTTCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	53995171	54088644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
Isoform_79189_6	chr18	+	2599	14	FSM	ENSMUSG00000001700.11	ENSMUST00000070166.6	2605	14	4	2	4	-2	multi-exon	FALSE	canonical	1	2	junction_2	2.64910390118809	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGCTGTTTCCTGCAT	2615	False	NA	NA	False	AATAAA	-24	NA	56565207	56636862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_56565430_56602604_56602725_56607090_56607203_56609674_56609742_56611920_56612025_56615692_56615789_56618283_56618356_56618447_56618529_56621822_56621935_56622686_56622810_56623742_56623831_56624966_56625072_56630391_56630486_56635659
Isoform_79194_245	chr18	+	1229	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	192	521	192	2	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCATTTCTACTGAGGT	NA	False	NA	17	True	AATAAA	-18	NA	56706085	56720263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
Isoform_79195_237	chr18	+	1536	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	198	208	198	-208	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTCAGCTGTTACA	NA	False	NA	NA	False	ATTAAA	-18	NA	56706091	56720576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
Isoform_79202_4566	chr18	+	2815	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	27	1	27	-1	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	4566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGTTCTTTTTAACC	NA	False	NA	19	True	AATAAA	-18	NA	56840911	56886495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
Isoform_79203_96	chr18	+	3116	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-274	1	-274	-1	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGTTCTTTTTAACC	NA	False	NA	19	True	AATAAA	-18	NA	56840610	56886495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
Isoform_79204_406	chr18	+	2913	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-71	1	-71	-1	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGTTCTTTTTAACC	NA	False	NA	19	True	AATAAA	-18	NA	56840813	56886495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
Isoform_79206_457	chr18	+	2258	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-6	591	-6	-591	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTGTAAGATGTGAATTAT	NA	False	NA	17	True	AAGAAA	-14	NA	56840878	56885905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
Isoform_7923_17	chr10	+	2297	20	FSM	ENSMUSG00000020017.15	ENSMUST00000129421.8	5319	20	300	2722	265	-84	multi-exon	FALSE	canonical	1	3	junction_2	3.06530942706548	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCACAAT	NA	False	NA	NA	False	TATAAA	-12	NA	93324929	93352444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93325240_93325735_93325797_93325901_93325930_93326608_93326684_93326776_93326850_93326960_93327028_93327671_93327710_93328314_93328441_93330472_93330613_93332444_93332493_93333336_93333485_93334620_93334717_93334817_93334877_93336478_93336560_93339123_93339190_93339265_93339432_93343276_93343412_93349895_93350005_93350120_93350191_93352043
Isoform_7924_3	chr10	+	2239	20	FSM	ENSMUSG00000020017.15	ENSMUST00000129421.8	5319	20	269	2811	234	29	multi-exon	FALSE	canonical	1	3	junction_2	3.06530942706548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTTGTTACTAT	NA	False	NA	NA	False	NA	NA	NA	93324898	93352355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93325240_93325735_93325797_93325901_93325930_93326608_93326684_93326776_93326850_93326960_93327028_93327671_93327710_93328314_93328441_93330472_93330613_93332444_93332493_93333336_93333485_93334620_93334717_93334817_93334877_93336478_93336560_93339123_93339190_93339265_93339432_93343276_93343412_93349895_93350005_93350120_93350191_93352043
Isoform_79246_123	chr18	+	5011	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	17	2	12	1	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTGTGCAATGATTTAAA	NA	False	NA	10	True	AATAAA	-20	NA	57487829	57526026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
Isoform_79255_24	chr18	+	4253	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	-12	-3718	-12	0	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTGCAATGATTTAA	NA	False	NA	9	True	AATAAA	-19	NA	57506951	57526025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
Isoform_79258_37	chr18	+	4309	5	NIC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	294	junction_1	276.069284781918	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTGCAATGATTTAA	NA	False	NA	9	True	AATAAA	-19	NA	57506951	57526025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522291
Isoform_79265_83	chr18	+	6754	27	FSM	ENSMUSG00000024597.12	ENSMUST00000115366.3	6520	27	-240	6	-240	-6	multi-exon	TRUE	canonical	3	112	junction_7	17.8975139591274	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACTCTTGCCTTTACC	NA	False	NA	19	True	AATAAA	-26	NA	58011509	58079887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
Isoform_7927_3	chr10	+	3598	14	NIC	ENSMUSG00000036168.16	novel	3656	16	NA	NA	41	0	intron_retention	FALSE	canonical	0	0	junction_7	1.73716766009788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTCTAGATGTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	93385934	93420189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_93386190_93391380_93391446_93398592_93398757_93399066_93399148_93401655_93401808_93403525_93403619_93405737_93405796_93406708_93406782_93409872_93410025_93411134_93411271_93414570_93414754_93415623_93415830_93417594_93417689_93418303
Isoform_79278_132	chr18	+	1956	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	23	1398	9	786	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTTTGTTTTCCATG	NA	False	NA	20	True	ATTAAA	-21	NA	58792560	58812042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
Isoform_7928_6	chr10	+	2610	7	NIC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	-36	51	intron_retention	FALSE	canonical	3	11	junction_1	4.57043640026736	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTGAGTTTTATACT	NA	False	NA	NA	False	TATAAA	-40	NA	93669643	93694001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_93669754_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
Isoform_79281_17	chr18	+	2508	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	10	859	-4	-859	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTATTATCTGGAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	58792547	58812581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
Isoform_79283_6	chr18	+	3260	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	115	2	101	-2	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAAGGGTCCTGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	58792652	58813438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
Isoform_79287_11	chr18	+	3588	4	NIC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-11	786	intron_retention	FALSE	canonical	3	482	junction_3	34.7658836600865	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTTTGTTTTCCATG	NA	False	NA	20	True	ATTAAA	-21	NA	58792526	58812042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_58792870_58804279_58804400_58804519_58806439_58810836
Isoform_7929_20	chr10	+	3849	7	NIC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	6	1332	intron_retention	FALSE	canonical	3	11	junction_1	4.57043640026736	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACCAAATCTAGCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	93669685	93695282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_93669754_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
Isoform_79292_263	chr18	+	2207	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	17	1514	0	-687	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGCCCTGTTCTATAAA	NA	False	NA	14	True	ATTAAA	-17	NA	60659289	60690324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
Isoform_79293_230	chr18	+	3714	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	17	7	0	-7	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCTGTTTGGTTTCAC	NA	False	NA	27	True	AATAAA	-17	NA	60659289	60691831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
Isoform_79303_968	chr18	+	2090	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	33	87	1	-87	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGCTGGACTTATGTT	NA	False	NA	16	True	ATTAAA	-17	NA	60693840	60705795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
Isoform_79304_83	chr18	+	2186	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	33	-9	1	9	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGATTATTTTTTGTT	NA	False	NA	44	True	AGTAAA	-39	NA	60693840	60705891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
Isoform_79305_14	chr18	+	1733	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	1	476	1	342	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTCTATTTGGTATT	NA	False	NA	NA	False	AAAAAG	-13	NA	60693808	60705406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
Isoform_7931_10	chr10	+	4623	21	FSM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	89	3332	89	2136	multi-exon	FALSE	canonical	3	10	junction_10	4.04474968323134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTTCTGAGACTCACAC	NA	False	NA	15	True	ATTAAA	-27	NA	93871951	93977869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
Isoform_79311_7078	chr18	+	542	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	55	0	-14	0	multi-exon	FALSE	canonical	3	20921	junction_1	2863.01274883644	7078	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907722	60911618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
Isoform_7932_7	chr10	+	4704	21	FSM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	-5	3345	-5	2123	multi-exon	FALSE	canonical	3	10	junction_10	4.04474968323134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGGTCATAACTGTTT	NA	False	NA	2	True	ATTAAA	-14	NA	93871857	93977856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
Isoform_7933_5	chr10	+	7950	21	FSM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	94	0	94	0	multi-exon	FALSE	canonical	3	10	junction_10	4.04474968323134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTGTGAAGTCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	93871956	93981201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
Isoform_79331_18	chr18	+	1200	9	NNC	ENSMUSG00000024610.16	novel	1224	8	NA	NA	1	-2	intron_retention	TRUE	non_canonical	1	5	junction_1	8.88467782195843	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTTGCTTCTGCCTCTT	NA	False	NA	5	True	AATAAA	-15	NA	60936920	60945722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_60936937_60936957_60937083_60940979_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944930_60944994_60945223
Isoform_79332_15	chr18	+	1369	8	FSM	ENSMUSG00000024610.16	ENSMUST00000050487.16	1224	8	-149	4	-149	2	multi-exon	FALSE	canonical	3	17	junction_2	5.45108115095397	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCTTGCTTCTGCCTC	NA	False	NA	3	True	AATAAA	-13	NA	60936770	60945720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_60937083_60940979_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944930_60944994_60945223
Isoform_79334_12	chr18	+	5413	23	NNC	ENSMUSG00000024620.12	novel	5407	23	NA	NA	-4	5	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_6	4.07370118225601	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTCAGGGTTGGGTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	61178217	61218138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_61178645_61193215_61193262_61194276_61194598_61196938_61197206_61197868_61197997_61198076_61198252_61198786_61198980_61199569_61199686_61201167_61201292_61201816_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
Isoform_79335_5	chr18	+	4062	17	ISM	ENSMUSG00000024620.12	ENSMUST00000115274.2	5423	24	20499	-4	20499	-1	3prime_fragment	FALSE	canonical	1	6	junction_3	3.98434436262731	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCGATTTCTCAGGGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	61198770	61218132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_61198980_61199569_61199686_61201167_61201292_61201813_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
Isoform_79336_12	chr18	+	4064	17	NNC	ENSMUSG00000024620.12	novel	5407	23	NA	NA	20500	5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	4.09219913371771	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTCAGGGTTGGGTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	61198771	61218138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_61198980_61199569_61199686_61201167_61201292_61201816_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
Isoform_79339_136	chr18	+	2367	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-371	-774	0	1	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGTGAAATTTTTTTAA	472	False	NA	28	True	ATTAAA	-21	NA	61688388	61721376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_7934_20	chr10	+	2346	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-144	1530	-144	0	multi-exon	FALSE	canonical	3	23	junction_4	6	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTGCGTTCTCTTCCT	NA	False	NA	0	True	AATAAA	-16	NA	93983740	94031543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
Isoform_7935_55	chr10	+	2290	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-84	1526	-84	4	multi-exon	FALSE	canonical	3	23	junction_4	6	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCGTTCTCTTCCTGTTT	NA	False	NA	4	True	AATAAA	-20	NA	93983800	94031547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
Isoform_79355_88	chr18	+	2448	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	-66	-123	-1	1	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGTGAAATTTTTTTAA	427	False	NA	28	True	ATTAAA	-21	NA	61688343	61721376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
Isoform_7936_4	chr10	+	3867	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-133	-2	-133	2	multi-exon	FALSE	canonical	3	23	junction_4	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCTGTATCCTGTCAA	NA	False	NA	NA	False	ATTAAA	-17	NA	93983751	94033075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
Isoform_7937_22	chr10	+	3802	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-67	-3	-67	3	multi-exon	FALSE	canonical	3	23	junction_4	6	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGTATCCTGTCAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	93983817	94033076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
Isoform_79377_586	chr18	+	2328	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-1	1756	-1	1	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGTGAAATTTTTTTAA	427	False	NA	28	True	ATTAAA	-21	NA	61688343	61721376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_79378_868	chr18	+	2292	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	31	1760	-8	-3	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGGAAGTGAAATTTTT	459	False	NA	24	True	ATTAAA	-17	NA	61688375	61721372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_79381_318	chr18	+	4034	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	55	-6	1	6	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGGTTGTCTCTCCCA	483	False	NA	19	True	AATAAA	-22	NA	61688399	61723138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_79385_128	chr18	+	3403	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	1	679	1	-679	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGTCTCATAAAGCTAT	429	False	NA	NA	False	AATAAA	-23	NA	61688345	61722453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_79386_151	chr18	+	4286	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	55	-258	1	258	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAGAATGAGCCATGAAGA	483	False	NA	23	True	AATAAA	-21	NA	61688399	61723390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_794_701	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_3	2787.93595494747	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
Isoform_7940_743	chr10	+	531	4	FSM	ENSMUSG00000020022.18	ENSMUST00000179990.8	566	4	35	0	2	0	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTCTTGTGCGTTCA	NA	False	NA	13	True	ATTAAA	-13	NA	94034900	94056810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
Isoform_79409_92	chr18	+	4119	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-38	-1758	1	1	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGAGGCTGGTTGTCTC	429	False	NA	14	True	AATAAA	-17	NA	61688345	61723133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
Isoform_7941_16	chr10	+	1020	4	FSM	ENSMUSG00000020022.18	ENSMUST00000020209.16	1110	4	84	6	2	-6	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACCTTGCAAGATGTT	NA	False	NA	5	True	NA	NA	NA	94034900	94057299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
Isoform_79410_264	chr18	+	2361	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-40	2	-1	-2	multi-exon	TRUE	canonical	3	816	junction_9	364.192494210831	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAAGTGAAATTTTTT	427	False	NA	25	True	ATTAAA	-18	NA	61688343	61721373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
Isoform_79413_307	chr18	+	2308	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	11	4	-4	-4	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAGGAAGTGAAATTTT	478	False	NA	23	True	ATTAAA	-16	NA	61688394	61721371	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
Isoform_79415_64	chr18	+	4327	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	11	-2015	-4	258	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAGAATGAGCCATGAAGA	478	False	NA	23	True	AATAAA	-21	NA	61688394	61723390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
Isoform_79420_153	chr18	+	4065	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	16	-1758	1	1	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGAGGCTGGTTGTCTC	483	False	NA	14	True	AATAAA	-17	NA	61688399	61723133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
Isoform_7943_12	chr10	+	448	3	NIC	ENSMUSG00000020022.18	novel	1110	4	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	1952.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTTGTGCGTTCAC	NA	False	NA	14	True	ATTAAA	-14	NA	94034896	94056811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_94034993_94035811_94035895_94056542
Isoform_79456_5	chr18	+	595	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183083.8	483	3	69	-181	-42	1	multi-exon	FALSE	canonical	3	10	junction_1	32.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATGACTTTCTTAATAGT	NA	False	NA	18	True	AATAAA	-18	NA	61772681	61780544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61772804_61778233_61778437_61780274
Isoform_79457_19	chr18	+	599	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	-22	11	-22	-11	multi-exon	FALSE	canonical	3	52	junction_1	11.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATGTACGAATGAC	NA	False	NA	6	True	AATAAA	-6	NA	61772701	61780532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61772840_61778233_61778437_61780274
Isoform_79458_7	chr18	+	691	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	-114	11	-3	-11	multi-exon	FALSE	canonical	3	52	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATGTACGAATGAC	NA	False	NA	6	True	AATAAA	-6	NA	61772609	61780532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61772840_61778233_61778437_61780274
Isoform_79459_6	chr18	+	904	2	FSM	ENSMUSG00000098702.2	ENSMUST00000184678.2	890	2	-14	0	-14	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGATCTCTCAGTTTGC	NA	False	NA	11	True	AATAAA	-25	NA	61859489	61868988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61860074_61868668
Isoform_79460_16	chr18	+	4641	17	FSM	ENSMUSG00000045629.9	ENSMUST00000051720.6	4536	17	-100	-5	-100	1	multi-exon	TRUE	canonical	3	14	junction_11	4.02336923485777	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTTGTCACCTTTATC	NA	False	NA	NA	False	ATTAAA	-23	NA	62086045	62148791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
Isoform_79461_33	chr18	+	4535	17	FSM	ENSMUSG00000045629.9	ENSMUST00000051720.6	4536	17	1	0	1	0	multi-exon	FALSE	canonical	3	14	junction_11	4.02336923485777	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACCCTTTTGTCACCT	NA	False	NA	NA	False	ATTAAA	-18	NA	62086146	62148786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
Isoform_79462_3	chr18	+	4639	16	NIC	ENSMUSG00000045629.9	novel	4536	17	NA	NA	1	-5	intron_retention	FALSE	canonical	3	14	junction_10	4.1505019776729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAATATACCCTTTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	62086146	62148781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
Isoform_79463_5	chr18	+	2800	4	NNC	ENSMUSG00000071847.14	novel	10879	5	NA	NA	-27	3434	intron_retention	FALSE	non_canonical	0	0	junction_3	9.8770215933527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCATTGTCATGCCCTGC	NA	False	NA	NA	False	NA	NA	NA	63055372	63072203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_63055793_63066945_63067130_63069976_63070568_63070598
Isoform_79464_4	chr18	+	1814	3	ISM	ENSMUSG00000071847.14	ENSMUST00000236135.2	10879	5	45	23090	45	2391	5prime_fragment	FALSE	canonical	3	18	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAGTTATGTTCTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	63055346	63071160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_63055793_63066945_63067130_63069976
Isoform_79465_93	chr18	+	3440	5	FSM	ENSMUSG00000071847.14	ENSMUST00000236135.2	10879	5	71	7368	-27	1347	multi-exon	FALSE	canonical	3	18	junction_2	2.8613807855649	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATACGTCTTCTTTGTCG	NA	False	NA	15	True	AATAAA	-25	NA	63055372	63086882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_63055793_63066945_63067130_63069976_63070509_63082945_63083268_63084900
Isoform_79467_9	chr18	+	3522	12	NIC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-12	-1	combination_of_known_junctions	FALSE	non_canonical	1	9	junction_3	68.5344818803759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTCAGTTTTATTTGC	NA	False	NA	5	True	AATAAA	-17	NA	63110959	63132520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_63111096_63113536_63113605_63115689_63115775_63116430_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
Isoform_7947_14	chr10	+	3365	4	FSM	ENSMUSG00000020023.19	ENSMUST00000065060.12	5530	4	-4	2169	-4	1	multi-exon	FALSE	canonical	3	5	junction_3	2.05480466765633	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	94350714	94424649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_94350967_94414284_94415202_94418135_94418272_94422589
Isoform_79471_5	chr18	+	1582	13	FSM	ENSMUSG00000024581.14	ENSMUST00000150267.2	1129	13	-19	-434	6	5	multi-exon	FALSE	canonical	2	11	junction_10	86.248671487353	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTCTTTCGATGTTGTC	NA	False	NA	19	True	NA	NA	NA	63110952	63130437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63125411_63125562_63127382_63127463_63128033_63128164_63129887
Isoform_79472_306	chr18	+	3494	12	FSM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	72	1	2	-1	multi-exon	FALSE	canonical	3	194	junction_8	19.1691039293584	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTCAGTTTTATTTGC	NA	False	NA	5	True	AATAAA	-17	NA	63110973	63132520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
Isoform_79473_62	chr18	+	3535	12	FSM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	31	1	1	-1	multi-exon	FALSE	canonical	3	194	junction_8	19.1691039293584	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTCAGTTTTATTTGC	NA	False	NA	5	True	AATAAA	-17	NA	63110932	63132520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
Isoform_79480_51	chr18	+	6989	27	FSM	ENSMUSG00000040560.11	ENSMUST00000236879.2	6987	27	1	-3	1	3	multi-exon	FALSE	canonical	3	34	junction_9	8.74837262973172	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGTTTTTATCCTGT	NA	False	NA	5	True	AATAAA	-14	NA	63841786	64122828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
Isoform_79481_147	chr18	+	3518	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-249	1533	4	3	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGGAATTAATCACGC	NA	False	NA	NA	False	AATAAA	-25	NA	65020779	65346265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
Isoform_79482_82	chr18	+	3636	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-247	1413	6	-3	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGCATATTTTTTTT	NA	False	NA	12	True	ATTAAA	-20	NA	65020781	65346385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
Isoform_79483_30	chr18	+	3668	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-280	1414	-27	-4	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGCATATTTTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	65020748	65346384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
Isoform_79487_47	chr18	+	3565	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-296	1533	-43	3	multi-exon	TRUE	canonical	3	102	junction_13	18.1799042339286	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGGAATTAATCACGC	NA	False	NA	NA	False	AATAAA	-25	NA	65020732	65346265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
Isoform_79491_3	chr18	+	2293	9	ISM	ENSMUSG00000032688.10	ENSMUST00000224056.3	4113	17	24	23060	0	-1	5prime_fragment	FALSE	canonical	3	18	junction_3	5.09288719686584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	65564032	65587816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745
Isoform_79492_28	chr18	+	5058	17	FSM	ENSMUSG00000032688.10	ENSMUST00000224056.3	4113	17	52	-997	-18	-265	multi-exon	FALSE	canonical	3	12	junction_12	7.09643396361863	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATGCCCAGTTTTTGA	NA	False	NA	12	True	AATACA	-18	NA	65564060	65611873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
Isoform_79497_5	chr18	+	5632	10	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	23.9294229757138	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCAAGAGAGTTATT	NA	False	NA	9	True	AATAAA	-22	NA	65715361	65822012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_65715470_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
Isoform_79499_148	chr18	+	785	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	49	26	-7	0	multi-exon	FALSE	canonical	3	349	junction_3	14.5244621242922	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGCTTCCTTTTGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	65933634	65950729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
Isoform_795_1173	SIRV4	-	669	4	FSM	SIRV4A	SIRV403	670	4	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_3	3065.46367708958	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15121	8322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
Isoform_79500_32	chr18	+	2820	5	FSM	ENSMUSG00000024516.14	ENSMUST00000139538.9	2829	5	4	5	-1	0	multi-exon	FALSE	canonical	3	355	junction_1	12.6565200588471	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTCCTTTTGTGGCC	NA	False	NA	NA	False	AATAAA	-16	NA	65933624	65950731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_65933783_65942515_65942626_65945735_65948029_65949891_65949950_65950530
Isoform_79502_8	chr18	+	2478	3	FSM	ENSMUSG00000024521.9	ENSMUST00000236933.2	1012	3	2	-1468	2	-12	multi-exon	FALSE	canonical	2	7	junction_1	46	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATGCCACTGGTCTT	NA	False	NA	10	True	AATAAA	-22	NA	66591665	66598619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_66591709_66593913_66594070_66596340
Isoform_79503_7	chr18	+	2540	3	FSM	ENSMUSG00000024521.9	ENSMUST00000236933.2	1012	3	-58	-1470	2	-10	multi-exon	FALSE	canonical	2	7	junction_1	46	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGCCACTGGTCTTTC	NA	False	NA	12	True	AATAAA	-24	NA	66591605	66598621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_66591709_66593913_66594070_66596340
Isoform_79504_25	chr18	+	2711	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	7	9	7	-9	multi-exon	FALSE	canonical	3	99	junction_2	7	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCACTGGTCTTTCT	NA	False	NA	13	True	AATAAA	-25	NA	66591610	66598622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_66591884_66593913_66594070_66596340
Isoform_79505_223	chr18	+	2655	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	63	9	3	-9	multi-exon	FALSE	canonical	3	99	junction_2	7	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCACTGGTCTTTCT	NA	False	NA	13	True	AATAAA	-25	NA	66591666	66598622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_66591884_66593913_66594070_66596340
Isoform_79506_5	chr18	+	5452	12	FSM	ENSMUSG00000024524.18	ENSMUST00000076605.9	3470	12	572	-2554	-156	-3	multi-exon	FALSE	canonical	2	7	junction_3	2.38452309974618	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGGGTTGTTTCGGTT	NA	False	NA	7	True	NA	NA	NA	67266664	67359860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67267042_67267283_67267357_67268382_67268438_67268589_67268710_67324440_67324539_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
Isoform_79510_66	chr18	+	3835	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	68	1151	2	-1151	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTCAAGCGATTTGTT	NA	False	NA	31	True	NA	NA	NA	67422323	67454391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_79511_1029	chr18	+	1358	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	64	3632	-2	1931	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422319	67451910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_79512_28	chr18	+	1672	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	8	3374	8	2189	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCGAAGCCCACGTGTA	NA	False	NA	12	True	ATTAAA	-19	NA	67422263	67452168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_79513_111	chr18	+	1728	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	64	3262	-2	2301	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTTAAACAGTGGAAT	NA	False	NA	22	True	CATAAA	-17	NA	67422319	67452280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_79514_240	chr18	+	1417	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	5	3632	5	1931	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422260	67451910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_79515_128	chr18	+	1610	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	64	3380	-2	2183	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCTTTATCGAAGCCCA	NA	False	NA	6	True	ATTAAA	-13	NA	67422319	67452162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_79516_21	chr18	+	1769	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	25	3260	25	2303	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAAACAGTGGAATTT	NA	False	NA	24	True	CATAAA	-19	NA	67422280	67452282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_79523_18	chr18	+	2507	7	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	2	1931	intron_retention	FALSE	canonical	3	1009	junction_2	97.2585329018602	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422323	67451910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
Isoform_7953_3	chr10	+	3818	7	FSM	ENSMUSG00000020024.8	ENSMUST00000220052.2	3910	7	98	-6	50	6	multi-exon	FALSE	canonical	3	151	junction_6	27.6872413456692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTAGGATCTTTATTAT	9618	False	NA	NA	False	AATAAA	-23	NA	94524629	94578561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918
Isoform_79537_102	chr18	+	924	5	FSM	ENSMUSG00000024526.10	ENSMUST00000025404.10	1115	5	189	2	189	-2	multi-exon	FALSE	canonical	1	47	junction_1	40.4042077016738	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTTGCAACTGGTTT	6397	False	NA	26	True	AATAAA	-24	NA	67476862	67500853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67476911_67491779_67491925_67493165_67493313_67499444_67499627_67500451
Isoform_79539_1647	chr18	+	1758	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	34.2928563989645	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTCTCTTGAACTTC	NA	False	NA	12	True	AATAAA	-14	NA	67523786	67535819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
Isoform_79540_88	chr18	+	1804	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	-46	0	-46	0	multi-exon	FALSE	canonical	3	606	junction_3	34.2928563989645	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTCTCTTGAACTTC	NA	False	NA	12	True	AATAAA	-14	NA	67523740	67535819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
Isoform_79547_7	chr18	+	2127	7	FSM	ENSMUSG00000024530.9	ENSMUST00000025411.9	1404	7	22	-745	-3	745	multi-exon	FALSE	canonical	3	4	junction_6	3.34995854037363	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTTTGTGACTGTCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	67597957	67613650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67611019_67611132_67612137
Isoform_79551_329	chr18	+	1058	7	FSM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	2	-1	0	1	multi-exon	FALSE	canonical	3	396	junction_3	27.1871088733041	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGTTTTATCTGGAAAGT	NA	False	NA	27	True	AATAAA	-33	NA	67774670	67787233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
Isoform_79555_9	chr18	+	1010	6	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	-2	17	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	169.713169789501	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTCTTTGAATCAGT	NA	False	NA	43	True	AATAAA	-29	NA	67774675	67787249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_67774806_67777378_67777551_67781197_67781317_67781842_67782017_67786222_67786344_67786955
Isoform_79556_4	chr18	+	1283	7	FSM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	1	16	1	-16	multi-exon	FALSE	canonical	1	2	junction_1	156.039168871864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTTTATTACCTAAGC	NA	False	NA	10	True	AATAAA	-16	NA	67774671	67787216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67775049_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
Isoform_79559_42	chr18	+	1670	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	26	-12	26	12	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTGAAATGATT	NA	False	NA	NA	False	AATAAA	-23	NA	67908070	67925675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
Isoform_79564_822	chr18	+	3418	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	122	2	23	-2	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTTGTCTTATAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	67908067	67928555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
Isoform_79567_413	chr18	+	3519	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	22	1	22	-1	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGTTGTCTTATAAAAAA	NA	False	NA	18	True	AATAAA	-20	NA	67907967	67928556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
Isoform_7957_3	chr10	+	2012	12	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	123	21807	59	-21147	5prime_fragment	FALSE	canonical	3	151	junction_6	28.2040967658985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATGTATTTGTGG	9627	False	NA	NA	False	TATAAA	-19	NA	94524638	94604908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680
Isoform_7958_101	chr10	+	3054	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	71	514	7	146	multi-exon	FALSE	canonical	0	0	junction_13	58.1305045183297	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTAATTTTCCT	9575	False	NA	9	True	AATAAA	-18	NA	94524586	94626201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
Isoform_79594_23	chr18	+	1422	4	FSM	ENSMUSG00000024542.10	ENSMUST00000224387.2	1425	4	-2	5	-2	-5	multi-exon	FALSE	canonical	3	112	junction_2	11.1455023315337	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	111	False	NA	NA	False	NA	NA	NA	67933180	67938442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435
Isoform_79597_47	chr18	+	8088	46	FSM	ENSMUSG00000024542.10	ENSMUST00000025425.7	8093	46	4	1	-2	-1	multi-exon	FALSE	canonical	3	91	junction_4	30.2980747463157	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCCTTTTTGTATTTT	111	False	NA	9	True	AATAAA	-18	NA	67933180	68018240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
Isoform_79598_44	chr18	+	8067	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_43	31.5891370608143	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	136	False	NA	10	True	AATAAA	-19	NA	67933205	68018241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
Isoform_7960_92	chr10	+	3122	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	1	516	1	144	multi-exon	TRUE	canonical	0	0	junction_13	58.1305045183297	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGTGTTTAATTTTC	9505	False	NA	7	True	AATAAA	-16	NA	94524516	94626199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
Isoform_79614_33	chr18	+	1509	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	35	4522	-2	1086	5prime_fragment	FALSE	canonical	3	765	junction_7	145.735681591328	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTTTTTCTGATACAT	NA	False	NA	11	True	ATTAAA	-12	NA	68433460	68453401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296
Isoform_79616_1348	chr18	+	1996	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-2	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	327.063064154123	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	88	True	AATAAA	-18	NA	68433460	68454978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454695_68454726
Isoform_79617_70	chr18	+	4983	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	25	0	-12	0	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	68433450	68457923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
Isoform_79622_81	chr18	+	1831	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	430.6471989924	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	88	True	AATAAA	-18	NA	68433460	68454978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454695_68454726
Isoform_79636_3	chr18	+	2312	2	FSM	ENSMUSG00000007480.6	ENSMUST00000239469.2	1162	2	-90	-1060	-83	1060	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68470583	68473842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_68470797_68471743
Isoform_79637_3	chr18	+	3121	20	NIC	ENSMUSG00000053477.19	novel	8577	20	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	28.7490816425648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAACAGAAAAACAAA	1568	False	NA	82	True	NA	NA	NA	69477167	69816314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_69478097_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_79638_5	chr18	+	2348	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114982.8	3694	20	66	1280	14	1	multi-exon	FALSE	canonical	2	4	junction_1	28.7490816425648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3258	False	NA	85	True	NA	NA	NA	69478857	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479011_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_79639_5	chr18	+	2318	20	FSM	ENSMUSG00000053477.19	ENSMUST00000078486.13	7147	20	108	4721	-22	1	multi-exon	FALSE	canonical	2	4	junction_1	28.0844590851464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3300	False	NA	85	True	NA	NA	NA	69478899	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479011_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_7964_10	chr10	+	5135	15	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	6	146	intron_retention	FALSE	canonical	0	0	junction_12	59.0201020753064	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTAATTTTCCT	9526	False	NA	9	True	AATAAA	-18	NA	94524537	94626201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
Isoform_79640_28	chr18	+	2367	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	475	144	21	1	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3665	False	NA	85	True	NA	NA	NA	69479264	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_79641_13	chr18	+	2401	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	441	144	-13	1	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3631	False	NA	85	True	NA	NA	NA	69479230	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_79642_12	chr18	+	3490	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	475	-979	21	26	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAACTAAAAAAGA	3665	False	NA	NA	False	NA	NA	NA	69479264	69817440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_79643_4	chr18	+	3545	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	427	-986	-27	33	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTAAAAAAGAAAGTCAA	3617	False	NA	NA	False	NA	NA	NA	69479216	69817447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_79645_50	chr18	+	2376	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-163	-21	24	1	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3668	False	NA	85	True	NA	NA	NA	69479267	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79646_17	chr18	+	2434	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-221	-21	-34	1	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3610	False	NA	85	True	NA	NA	NA	69479209	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79648_18	chr18	+	3471	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-163	-1116	24	-2	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	3668	False	NA	NA	False	AATACA	-33	NA	69479267	69817412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79649_7	chr18	+	3559	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-223	-1144	-36	26	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAACTAAAAAAGA	3608	False	NA	NA	False	NA	NA	NA	69479207	69817440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79651_3	chr18	+	2349	20	NNC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	32.8695061133106	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3679	False	NA	85	True	NA	NA	NA	69479278	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788034_69788109_69790817_69791022_69808769_69808905_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_79652_4	chr18	+	2312	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	85	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	27.706314969636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3729	False	NA	85	True	NA	NA	NA	69479328	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788034_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79653_4	chr18	+	2445	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	27.706314969636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	3626	False	NA	115	True	NA	NA	NA	69479225	69816347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788034_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79654_9	chr18	+	2364	20	NIC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	21	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	26.5128411891754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3665	False	NA	85	True	NA	NA	NA	69479264	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_79655_18	chr18	+	2376	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	21	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	25.7485174249798	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3665	False	NA	85	True	NA	NA	NA	69479264	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79656_6	chr18	+	2430	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	25.7485174249798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3611	False	NA	85	True	NA	NA	NA	69479210	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79658_5	chr18	+	1813	13	FSM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	425	199	0	1	multi-exon	FALSE	canonical	3	8	junction_1	33.3437483729043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	NA	False	NA	85	True	NA	NA	NA	69726483	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79659_4	chr18	+	2945	13	FSM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	416	-924	-9	26	multi-exon	FALSE	canonical	3	8	junction_1	33.3437483729043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAACTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	69726474	69817440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79662_13	chr18	+	721	4	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	65494	-48	-1761	1	3prime_fragment	FALSE	canonical	3	43	junction_1	45.7626728046147	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	NA	False	NA	85	True	NA	NA	NA	69811008	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_79663_8	chr18	+	741	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84942	199	-1769	1	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	NA	False	NA	85	True	NA	NA	NA	69811000	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79664_3	chr18	+	1266	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84942	-326	-1769	138	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTTGATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	69811000	69816842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_79666_9	chr18	+	1526	11	FSM	ENSMUSG00000038903.14	ENSMUST00000043929.11	1618	11	96	-4	-8	4	multi-exon	FALSE	canonical	3	15	junction_1	8.64869932417586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATGTCCTTCCATGTG	NA	False	NA	7	True	AATAAA	-18	NA	70058632	70102559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
Isoform_79667_5	chr18	+	1488	11	FSM	ENSMUSG00000038903.14	ENSMUST00000043929.11	1618	11	68	62	-36	-62	multi-exon	FALSE	canonical	3	15	junction_1	8.64869932417586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATATGGGTGAATGAT	NA	False	NA	-59	True	AATAAA	-15	NA	70058604	70102493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
Isoform_79668_9	chr18	+	1554	11	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	-41	3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	9.48946784598589	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCATGTCCTTCCATGT	NA	False	NA	6	True	AATAAA	-17	NA	70058599	70102558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_70058692_70071916_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
Isoform_79669_3	chr18	+	1611	12	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.5137940418689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCATGTCCTTCCA	NA	False	NA	3	True	AATAAA	-14	NA	70058634	70102555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_70058692_70063209_70063305_70071916_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
Isoform_79670_30	chr18	+	2789	2	ISM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	109	-4	109	4	intron_retention	FALSE	canonical	3	332	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGTGCCTGGTGTTTTC	NA	False	NA	17	True	AATAAA	-34	NA	70701513	70715987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_70702039_70713723
Isoform_79672_11	chr18	+	2953	2	ISM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	-55	-4	-55	4	intron_retention	FALSE	canonical	3	332	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGTGCCTGGTGTTTTC	NA	False	NA	17	True	AATAAA	-34	NA	70701349	70715987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_70702039_70713723
Isoform_79674_35	chr18	+	1275	3	FSM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	18	-3	18	3	multi-exon	FALSE	canonical	3	203	junction_2	64.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAAGTGCCTGGTGTTTT	NA	False	NA	16	True	AATAAA	-33	NA	70701422	70715986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_70702039_70713723_70713884_70715487
Isoform_79675_78	chr18	+	1184	3	FSM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	109	-3	109	3	multi-exon	FALSE	canonical	3	203	junction_2	64.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAAGTGCCTGGTGTTTT	NA	False	NA	16	True	AATAAA	-33	NA	70701513	70715986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_70702039_70713723_70713884_70715487
Isoform_79676_31	chr18	+	1352	3	FSM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	-59	-3	-59	3	multi-exon	FALSE	canonical	3	203	junction_2	64.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAAGTGCCTGGTGTTTT	NA	False	NA	16	True	AATAAA	-33	NA	70701345	70715986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_70702039_70713723_70713884_70715487
Isoform_79677_7	chr18	+	4700	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	254	-3001	109	3001	multi-exon	FALSE	canonical	3	48	junction_4	103.071846570999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGTTTGTGTAAATTA	NA	False	NA	NA	False	AATAAA	-15	NA	70701513	70762203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
Isoform_79678_7	chr18	+	1849	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	106	-2	-39	2	multi-exon	FALSE	canonical	3	48	junction_4	103.071846570999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAACTTCTTTTGTTAA	NA	False	NA	20	True	AATAAA	-20	NA	70701365	70759204	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
Isoform_79679_9	chr18	+	1805	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	148	0	3	0	multi-exon	FALSE	canonical	3	48	junction_4	103.071846570999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAACTTCTTTTGTT	NA	False	NA	18	True	AATAAA	-18	NA	70701407	70759202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
Isoform_79680_39	chr18	+	1696	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	254	3	109	-3	multi-exon	FALSE	canonical	3	48	junction_4	103.071846570999	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATTGGAACTTCTTTT	NA	False	NA	15	True	AATAAA	-15	NA	70701513	70759199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
Isoform_79684_143	chr18	+	3991	2	FSM	ENSMUSG00000037253.9	ENSMUST00000091852.5	3738	2	-255	2	-255	-2	multi-exon	FALSE	canonical	3	119	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTATTCTCCTTGGTGTT	NA	False	NA	34	True	AATAAA	-21	NA	73705859	73725644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_73706848_73722641
Isoform_79686_61	chr18	+	4076	2	FSM	ENSMUSG00000037253.9	ENSMUST00000091852.5	3738	2	-339	1	-339	-1	multi-exon	FALSE	canonical	3	119	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATTCTCCTTGGTGTTT	NA	False	NA	35	True	AATAAA	-22	NA	73705775	73725645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_73706848_73722641
Isoform_79692_603	chr18	+	2530	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	89	1	89	-1	multi-exon	FALSE	canonical	3	205	junction_6	27.3663729300567	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349290	74354563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_79693_39	chr18	+	2648	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	-29	1	-22	-1	multi-exon	TRUE	canonical	3	205	junction_6	27.3663729300567	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349172	74354563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_79694_128	chr18	+	2619	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	0	1	0	-1	multi-exon	FALSE	canonical	3	205	junction_6	27.3663729300567	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349201	74354563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_79696_17	chr18	+	2631	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	60.669605408377	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349201	74354563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352322_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_79697_91	chr18	+	2533	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	98	-1	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	60.669605408377	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349299	74354563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352322_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_7970_78	chr10	+	3873	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	-6	0	6	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGACTGGTCTGTTTC	NA	False	NA	19	True	AATAAA	-23	NA	95351006	95381525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
Isoform_79709_33	chr18	+	4677	16	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	28	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	19.7033556081755	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	TTTAAA	-19	NA	74401273	74414307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
Isoform_7971_1364	chr10	+	1217	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	2650	0	1	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTTTGTACAGTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	95351006	95378869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
Isoform_79710_28	chr18	+	2938	17	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	24	junction_12	22.8219158650189	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401238	74415757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406646_74406669_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
Isoform_79713_9	chr18	+	2956	17	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	28	7	at_least_one_novel_splicesite	FALSE	non_canonical	2	24	junction_12	22.8219158650189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGCCATGTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	74401273	74415810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406646_74406669_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
Isoform_79715_41	chr18	+	4500	16	NNC	ENSMUSG00000024561.12	novel	2908	16	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	non_canonical	2	25	junction_11	20.3550703484141	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	TTTAAA	-19	NA	74401258	74414307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406646_74406669_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
Isoform_79716_8	chr18	+	2659	16	NNC	ENSMUSG00000024561.12	novel	2908	16	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	25	junction_11	22.2494943762774	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401349	74415757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406646_74406669_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
Isoform_79717_18	chr18	+	2790	15	FSM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	-3	46	-3	1	multi-exon	FALSE	canonical	3	25	junction_10	20.6853245819645	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401242	74415757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
Isoform_79719_48	chr18	+	1712	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	-196	0	-196	0	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912071	74939279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
Isoform_79720_354	chr18	+	1501	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	15	0	15	0	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912282	74939279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
Isoform_79723_10	chr18	+	1811	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	-293	-2	-293	2	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCTTTTCTTGTTGGTTT	NA	False	NA	15	True	AATAAA	-19	NA	74911974	74939281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
Isoform_79725_12	chr18	+	2060	9	NIC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	191	junction_7	16.7779617355625	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912280	74939279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74932246_74934367_74934439_74937071_74937227_74938925
Isoform_79729_670	chr18	+	665	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	1	109	1	-108	multi-exon	FALSE	canonical	3	6761	junction_1	2088.63605148325	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTTCTGGTGGTCTTT	NA	False	NA	31	True	AATAAA	-31	NA	75133548	75136343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
Isoform_79730_56	chr18	+	731	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	45	-1	45	1	multi-exon	FALSE	canonical	3	6761	junction_1	2088.63605148325	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGACTGTCTAGTAGCT	NA	False	NA	22	True	ATTAAA	-38	NA	75133592	75136453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
Isoform_79741_72	chr18	+	877	3	FSM	ENSMUSG00000036299.6	ENSMUST00000236421.2	524	3	-12	-341	-11	1	multi-exon	FALSE	canonical	3	91	junction_1	354	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138927	75143005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_75138972_75141721_75141898_75142348
Isoform_79742_108	chr18	+	958	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	22	-1	-10	1	multi-exon	FALSE	canonical	3	169	junction_1	315	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138960	75143005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_75139086_75141721_75141898_75142348
Isoform_79746_10	chr18	+	1578	9	FSM	ENSMUSG00000035765.11	ENSMUST00000236220.2	1571	9	-15	8	-15	-8	multi-exon	FALSE	canonical	2	9	junction_8	64.1424196612507	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTCCAGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	75151836	75239482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75238937
Isoform_79749_16	chr18	+	2795	15	ISM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	-21	56015	-17	-56015	5prime_fragment	FALSE	canonical	3	162	junction_13	14.7406144473599	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGCTCTTTTTGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	75151834	75364020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060
Isoform_7975_117	chr10	+	1503	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	2364	0	287	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTGTCCTTGCCATG	NA	False	NA	13	True	AATAAA	-24	NA	95351006	95379155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
Isoform_79750_717	chr18	+	2477	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	-21	0	-17	0	multi-exon	FALSE	canonical	3	162	junction_13	17.5886149255705	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151834	75420035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
Isoform_79754_24	chr18	+	2333	16	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	49.9165525875157	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151795	75420035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75376355_75376470_75419690
Isoform_79756_16	chr18	+	2232	15	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-40	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	54.3467701760779	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGACTTATTTTTAAA	NA	False	NA	19	True	AATAAA	-19	NA	75151811	75420036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
Isoform_79757_20	chr18	+	2439	16	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-51	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	51.8457541388128	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGACTTATTTTTAAA	NA	False	NA	19	True	AATAAA	-19	NA	75151800	75420036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
Isoform_79762_202	chr18	+	4436	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	-165	7	-165	-7	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCATCCCTTGTTGTTC	NA	False	NA	12	True	ATTAAA	-17	NA	75500434	75528999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
Isoform_7977_44	chr10	+	1348	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	-131	2650	-131	1	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTTTGTACAGTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	95350875	95378869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
Isoform_79778_56	chr18	+	4495	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	-225	8	-225	-8	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCATCCCTTGTTGTT	NA	False	NA	11	True	ATTAAA	-16	NA	75500374	75528998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
Isoform_79795_21	chr18	+	2136	3	FSM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	-6	17	-6	-17	multi-exon	FALSE	canonical	0	0	junction_1	1	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACACAAAGGGAAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	76192522	76279497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76192689_76269897_76271122_76278751
Isoform_79796_10	chr18	+	3824	3	FSM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	24	-1701	24	-417	multi-exon	FALSE	canonical	0	0	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTAGTTCTTTTTGTC	NA	False	NA	NA	False	TATAAA	-17	NA	76192552	76281215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76192689_76269897_76271122_76278751
Isoform_79799_42	chr18	+	2327	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	87	5675	-34	-6	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAGTGGATTAACTTGG	NA	False	NA	3	True	AATAAA	-16	NA	76374737	76438359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_798_443	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	7498	junction_1	0	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4_-_8991_13672
Isoform_7980_39	chr10	+	1519	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	-304	2652	-304	-1	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGCCTTTGTACAGTT	NA	False	NA	NA	False	AGTAAA	-17	NA	95350702	95378867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
Isoform_79800_121	chr18	+	2082	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	343	5664	-123	5	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTGGAAGTCCTTGAC	NA	False	NA	14	True	AATAAA	-27	NA	76374993	76438370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79801_77	chr18	+	2531	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	322	5236	-144	433	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGCCTCATTT	NA	False	NA	15	True	AATAAA	-20	NA	76374972	76438798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79802_80	chr18	+	1962	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	314	5813	-152	-144	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTTATTTTTGTGT	NA	False	NA	17	True	TATAAA	-28	NA	76374964	76438221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79803_21	chr18	+	2736	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	116	5237	-5	432	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGACCTTTTGCCTCATT	NA	False	NA	14	True	AATAAA	-19	NA	76374766	76438797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79804_10	chr18	+	2430	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	-154	5813	-154	-144	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTTATTTTTGTGT	NA	False	NA	17	True	TATAAA	-28	NA	76374496	76438221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79805_9	chr18	+	2612	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	-195	5672	-195	-3	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGGATTAACTTGGAAG	NA	False	NA	6	True	AATAAA	-19	NA	76374455	76438362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79808_7	chr18	+	3058	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	-202	5233	-202	436	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTTGCCTCATTTTAC	NA	False	NA	18	True	AATAAA	-23	NA	76374448	76438801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79809_11	chr18	+	8546	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	320	-777	-146	777	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCATTATGGGATCCA	NA	False	NA	7	True	ATTAAA	-22	NA	76374970	76444811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79816_6	chr18	+	2016	10	FSM	ENSMUSG00000024563.17	ENSMUST00000091831.13	1645	10	187	-558	-158	-6	multi-exon	FALSE	canonical	3	36	junction_2	75.1282031834933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAGTGGATTAACTTGG	NA	False	NA	3	True	AATAAA	-16	NA	76374958	76438359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79820_9	chr18	+	2100	11	NIC	ENSMUSG00000024563.17	novel	1305	8	NA	NA	-24	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.1644197742522	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGGATTAACTTGGAAG	NA	False	NA	6	True	AATAAA	-19	NA	76375220	76438362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_79827_370	chr18	+	1379	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	23	0	-5	0	multi-exon	FALSE	canonical	3	1641	junction_2	78	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTCTGATTTATGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	77017735	77029308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_77017913_77027263_77027366_77028208
Isoform_79830_447	chr18	+	1535	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	36	3906	1	-4	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTTTTAATTAGACAT	NA	False	NA	15	True	NA	NA	NA	77031823	77059097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
Isoform_79831_28	chr18	+	4003	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	29	1445	-6	960	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCTATTTGACCAAACC	NA	False	NA	NA	False	AATAAA	-18	NA	77031816	77061558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
Isoform_79837_13	chr18	+	1589	7	FSM	ENSMUSG00000025421.16	ENSMUST00000148955.3	3069	7	-19	1499	-19	-2	multi-exon	FALSE	canonical	0	0	junction_2	159.414292542001	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTTAATTAGACATTG	NA	False	NA	17	True	NA	NA	NA	77032113	77059099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_77032224_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
Isoform_79838_12	chr18	+	1580	7	FSM	ENSMUSG00000025421.16	ENSMUST00000150990.9	3126	7	44	1502	-9	-5	multi-exon	FALSE	canonical	0	0	junction_2	156.505235979148	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGTTTTAATTAGACA	NA	False	NA	14	True	NA	NA	NA	77032123	77059096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_77032228_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
Isoform_79840_103	chr18	+	1935	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	9	-127	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTTGATTCTTTCAA	7908	False	NA	16	True	AATAAA	-26	NA	77152912	77234506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
Isoform_79841_31	chr18	+	2007	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGTAGCATTTATGCT	7963	False	NA	19	True	ATTAAA	-31	NA	77152967	77234633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
Isoform_79846_108	chr18	+	2390	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	26	644	-11	39	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAACTTCTGTTTAATC	7925	False	NA	52	True	ATTAAA	-24	NA	77152929	77240852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_79848_31	chr18	+	2751	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	34	275	-3	189	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGACTTTTTTTTTCC	7933	False	NA	67	True	NA	NA	NA	77152937	77241221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_79865_3556	chr18	+	2194	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	274	3	11	0	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	3556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77861702	77870566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
Isoform_7989_14	chr10	+	691	3	FSM	ENSMUSG00000112188.2	ENSMUST00000219583.2	670	3	-20	-1	-20	1	multi-exon	FALSE	canonical	3	30	junction_1	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAAGTAATCTAGGT	3200	False	NA	NA	False	NA	NA	NA	95567068	95575216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_95567365_95570676_95570791_95574935
Isoform_79918_25	chr18	+	3006	15	NIC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	5	877	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	7.97860659923186	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTGTATTCTTGTG	2215	False	NA	NA	False	AATAAA	-19	NA	77877618	77971456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_77877687_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
Isoform_79920_18	chr18	+	3318	17	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	5	878	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.3493659226061	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTATTCTTGTGT	2215	False	NA	NA	False	AATAAA	-20	NA	77877618	77971457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77877687_77882004_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
Isoform_79921_4	chr18	+	3416	18	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	17	877	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0836186976605	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTGTATTCTTGTG	2227	False	NA	NA	False	AATAAA	-19	NA	77877630	77971456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77877687_77881229_77881341_77882004_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
Isoform_79922_3	chr18	+	1001	5	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	18	-83847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.44391338376205	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATAGTAGAGTGATTAT	2228	False	NA	NA	False	AAAAAG	-17	NA	77877631	77883269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77877687_77881229_77881341_77882004_77882171_77882305_77882451_77882745
Isoform_79923_20	chr18	+	2671	9	ISM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	75689	-881	75689	881	3prime_fragment	FALSE	canonical	3	30	junction_2	5.23061898822692	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTATTCTTGTGTTAG	9082	False	NA	NA	False	AATAAA	-23	NA	77957933	77971460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
Isoform_79924_8	chr18	+	9700	44	FSM	ENSMUSG00000039840.9	ENSMUST00000044622.7	9660	44	-28	-12	-28	12	multi-exon	FALSE	canonical	2	14	junction_24	5.20286146671814	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAGGCTAATGTAGAT	NA	False	NA	NA	False	AATAAA	-31	NA	77981651	78078240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_77981775_77991364_77992298_77994363_77994608_77997375_77997513_77997947_77998056_77999121_77999196_78000621_78000728_78002244_78002360_78002694_78002846_78003921_78004078_78005595_78005754_78008115_78008271_78011751_78011893_78015709_78015875_78018193_78018314_78019051_78019309_78022338_78022480_78024155_78024301_78024512_78024711_78025522_78025634_78026685_78026806_78028255_78028423_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139
Isoform_79927_112	chr18	+	3120	3	FSM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	29	-2	29	2	multi-exon	FALSE	canonical	3	46	junction_2	5.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCGTGTGTTATTGATA	NA	False	NA	22	True	AATAAA	-16	NA	80090133	80162856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80090358_80123039_80123263_80160183
Isoform_79930_27	chr18	+	3197	3	FSM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	-49	-1	-49	1	multi-exon	FALSE	canonical	3	46	junction_2	5.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACCGTGTGTTATTGAT	NA	False	NA	21	True	AATAAA	-15	NA	80090055	80162855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80090358_80123039_80123263_80160183
Isoform_79935_108	chr18	+	2925	3	FSM	ENSMUSG00000024571.16	ENSMUST00000145116.8	968	3	13	-1970	-3	-4	multi-exon	FALSE	canonical	3	1244	junction_2	916.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTTGTTGTGGGAATTC	NA	False	NA	NA	False	AATAAA	-17	NA	80250057	80255952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80250117_80250368_80250559_80253276
Isoform_79936_79	chr18	+	2926	3	FSM	ENSMUSG00000024571.16	ENSMUST00000145116.8	968	3	-13	-1945	-13	-11	multi-exon	FALSE	canonical	3	1244	junction_2	916.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250031	80255927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80250117_80250368_80250559_80253276
Isoform_79937_2885	chr18	+	1618	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	45	20	-3	-11	multi-exon	FALSE	canonical	3	1096	junction_3	900.996608699993	2885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250057	80255927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
Isoform_79938_220	chr18	+	1663	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	0	20	0	-11	multi-exon	FALSE	canonical	3	1096	junction_3	900.996608699993	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250012	80255927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
Isoform_79939_54	chr18	+	802	5	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	21	193	combination_of_known_splicesites	FALSE	canonical	3	288	junction_3	1074.60606154069	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250030	80265746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393
Isoform_79940_67	chr18	+	778	5	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-23	193	combination_of_known_splicesites	FALSE	canonical	3	288	junction_3	1074.60606154069	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250054	80265746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393
Isoform_79942_1244	chr18	+	710	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	44	3324	-24	193	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250053	80265746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
Isoform_79943_105	chr18	+	750	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	4	3324	4	193	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250013	80265746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
Isoform_79947_98	chr18	+	1611	4	FSM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	28	11	0	-11	multi-exon	FALSE	canonical	3	109	junction_1	503.796475661441	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250109	80255927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80250162_80250368_80250559_80253276_80253346_80254627
Isoform_79952_66	chr18	+	1726	4	FSM	ENSMUSG00000024571.16	ENSMUST00000127234.8	1755	4	0	29	0	-11	multi-exon	FALSE	canonical	3	221	junction_1	451.424658411813	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250109	80255927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80250277_80250368_80250559_80253276_80253346_80254627
Isoform_79964_18	chr18	+	1869	5	FSM	ENSMUSG00000034006.18	ENSMUST00000129043.8	1864	5	-5	0	-5	0	multi-exon	FALSE	canonical	3	16	junction_1	11.0989864402116	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCATGTGGTGTAAG	NA	False	NA	6	True	AATAAA	-39	NA	80299493	80335931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80299534_80299996_80300334_80306634_80306769_80326490_80326708_80334790
Isoform_79965_3	chr18	+	3250	4	FSM	ENSMUSG00000034006.18	ENSMUST00000134545.3	3258	4	0	8	0	-8	multi-exon	FALSE	canonical	3	12	junction_3	14.3527000944073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGCAATCTCTGCCCT	NA	False	NA	NA	False	AATAAA	-11	NA	80299521	80318358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80315676
Isoform_79966_14	chr18	+	2020	6	FSM	ENSMUSG00000034006.18	ENSMUST00000091798.10	1989	6	-40	9	-18	1	multi-exon	FALSE	canonical	3	12	junction_3	14.1279864099595	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTTCATGTGGTGTAA	NA	False	NA	5	True	AATAAA	-38	NA	80299480	80335930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
Isoform_79967_21	chr18	+	1954	5	FSM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	-40	-3	-6	1	multi-exon	FALSE	canonical	3	25	junction_3	7.26291952316697	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTTCATGTGGTGTAA	NA	False	NA	5	True	AATAAA	-38	NA	80299492	80335930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80326490_80326708_80334790
Isoform_79971_30	chr18	+	4700	4	FSM	ENSMUSG00000041607.18	ENSMUST00000091789.11	4797	4	77	20	61	-20	multi-exon	FALSE	canonical	3	13	junction_1	4.02768199119819	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGTGTACTAATTGC	NA	False	NA	15	True	ATTAAA	-15	NA	82493347	82576808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_82493520_82518851_82518928_82540174_82540263_82572444
Isoform_79972_23	chr18	+	4799	4	FSM	ENSMUSG00000041607.18	ENSMUST00000091789.11	4797	4	-22	20	-22	-20	multi-exon	FALSE	canonical	3	13	junction_1	4.02768199119819	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGTGTACTAATTGC	NA	False	NA	15	True	ATTAAA	-15	NA	82493248	82576808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_82493520_82518851_82518928_82540174_82540263_82572444
Isoform_79973_3	chr18	+	2038	5	FSM	ENSMUSG00000041607.18	ENSMUST00000132369.3	1947	5	-89	-2	-18	1	multi-exon	FALSE	canonical	1	4	junction_1	0.866025403784439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCTTTGCCCAGGTGTC	7797	False	NA	14	True	AATAAA	-15	NA	82572615	82603753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_82572876_82590949_82591052_82593296_82593333_82597060_82597184_82602236
Isoform_79974_3	chr18	+	5877	6	FSM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	-11	1837	-11	1777	multi-exon	FALSE	canonical	2	4	junction_1	92.9184588765871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAAGGTGTCGTCTGTGT	NA	False	NA	14	True	ATTAAA	-21	NA	82932745	83021602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_82932849_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
Isoform_79975_3	chr18	+	3665	4	ISM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	72292	1840	-884	1774	3prime_fragment	FALSE	canonical	3	187	junction_1	11.7851130197758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACGAAGGTGTCGTCTG	7964	False	NA	11	True	ATTAAA	-18	NA	83005048	83021599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_83006324_83011194_83011315_83012594_83012663_83019397
Isoform_79977_3	chr18	+	4905	4	ISM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	72848	44	-328	-44	3prime_fragment	FALSE	canonical	3	187	junction_1	11.7851130197758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTACCCCTCTTTTA	8520	False	NA	8	True	AATAAA	-22	NA	83005604	83023395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_83006324_83011194_83011315_83012594_83012663_83019397
Isoform_79978_6	chr18	+	4168	3	ISM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	78455	45	5279	-45	3prime_fragment	FALSE	canonical	3	212	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTTACCCCTCTTTT	NA	False	NA	7	True	AATAAA	-21	NA	83011211	83023394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_83011315_83012594_83012663_83019397
Isoform_7998_30	chr10	+	7801	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-59	7	0	-7	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTATCCAATGACTATG	2720	False	NA	7	True	ATTAAA	-19	NA	95776552	95881373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
Isoform_79980_33	chr18	+	3413	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	4	13	4	-13	multi-exon	FALSE	canonical	3	35	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACACAC	4258	False	NA	NA	False	AGTAAA	-33	NA	84106191	84115640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_84106499_84112534
Isoform_79983_584	chr18	+	796	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	32	5	-7	0	multi-exon	FALSE	canonical	3	946	junction_4	54.2425110038243	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATATGTGTCTGTCTGTTT	NA	False	NA	14	True	AATATA	-19	NA	84869494	84897991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
Isoform_79990_372	chr18	+	2082	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	-172	0	-172	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	628	False	NA	26	True	AATAAA	-15	NA	84952734	84999598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
Isoform_79991_605	chr18	+	1667	10	FSM	ENSMUSG00000034391.13	ENSMUST00000037718.10	1437	10	-133	-97	-3	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	1043	False	NA	26	True	AATAAA	-15	NA	84953149	84999598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
Isoform_79994_16	chr18	+	2139	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	-229	0	-229	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	571	False	NA	26	True	AATAAA	-15	NA	84952677	84999598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
Isoform_80_699	ERCC-00060	+	504	1	FSM	ERCC-00060A	DQ516763	506	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	699	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00060_+_0_500
Isoform_80006_21	chr18	+	7043	49	FSM	ENSMUSG00000023066.11	ENSMUST00000023828.9	7271	49	225	3	207	0	multi-exon	FALSE	canonical	3	17	junction_17	5.75166038828982	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTAAAAGTGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	88990138	89149137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
Isoform_80007_11	chr18	+	7301	49	FSM	ENSMUSG00000023066.11	ENSMUST00000023828.9	7271	49	-33	3	-33	0	multi-exon	TRUE	canonical	3	17	junction_17	5.75166038828982	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTAAAAGTGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	88989880	89149137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
Isoform_80010_160	chr18	+	4544	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	59	8	9	-8	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATAATTGCTACCTTTA	4801	False	NA	17	True	AATAAA	-17	NA	90528336	90561383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
Isoform_80016_10	chr18	+	4595	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	-2	18	-2	-18	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCATTGCATAATT	4740	False	NA	7	True	AATAAA	-7	NA	90528275	90561373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
Isoform_80019_27	chr18	+	1998	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	9	-4	9	-2	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGTCTTGGTCATAG	NA	False	NA	7	True	NA	NA	NA	90597909	90610650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
Isoform_80020_35	chr18	+	1970	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	38	-5	-10	-1	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGTCTTGGTCATAGT	NA	False	NA	8	True	NA	NA	NA	90597938	90610651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
Isoform_80023_12	chr18	+	4305	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	38	-2340	-10	2334	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGATCCAAGTGGTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	90597938	90612986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
Isoform_80024_4	chr18	+	5123	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	22	-3142	3	3136	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGGTCTTTTCTAAGG	NA	False	NA	4	True	AATAAA	-17	NA	90597922	90613788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
Isoform_8003_980	chr10	+	1814	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	4	3183	4	958	multi-exon	FALSE	canonical	3	461	junction_1	0	980	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTCTTGTCATGATT	NA	False	NA	NA	False	AATAAA	-24	NA	96452871	96455488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_96453335_96454137
Isoform_80032_370	chr18	+	2129	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	397.186734137922	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTTGATTCTTTCAA	6432	False	NA	16	True	AATAAA	-26	NA	77126250	77234506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77126389_77126418_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
Isoform_80033_92	chr18	+	2275	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-9	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAACTTAACTATGTAGC	6434	False	NA	10	True	ATTAAA	-22	NA	77126252	77234624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
Isoform_80044_20	chr18	+	2300	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-2806	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	196.592570787629	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAATCAGTTGGTATTT	6434	False	NA	NA	False	ATTAAA	-17	NA	77126252	77238007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
Isoform_80046_451	chr18	+	2624	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	34	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAACAACAACTTCTGTT	6434	False	NA	47	True	ATTAAA	-19	NA	77126252	77240847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_80050_27	chr18	+	2724	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26652	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.40677900584	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTCTACTTTTCTT	6433	False	NA	NA	False	AATGAA	-20	NA	77126251	77240976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77126389_77126418_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_80052_41	chr18	+	3246	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.40677900584	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAATTCTCATCAATATA	6434	False	NA	NA	False	CATAAA	-20	NA	77126252	77241499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77126371_77126400_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_80055_27	chr18	+	2638	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26689	40	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	362.40677900584	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAACTTCTGTTTAATCC	6396	False	NA	53	True	ATTAAA	-25	NA	77126214	77240853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77126389_77126418_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_80058_98	chr18	+	5182	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	1909	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGTCTGACATTGATT	6434	False	NA	6	True	AATAAA	-17	NA	77126252	77243405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_80081_16	chr18	+	460	3	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-315	-16611	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_2	15	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	21194664	21200631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_21194811_21194905_21195074_21200485
Isoform_80082_87	chr18	+	2696	17	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-278	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_6	16.5481069536669	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGATCTTTCTCCC	NA	False	NA	9	True	AATAAA	-21	NA	21194701	21233256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
Isoform_80083_7	chr18	+	2753	17	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-341	-6	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_6	16.5481069536669	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAATTGGTGATCTT	NA	False	NA	3	True	AATAAA	-15	NA	21194638	21233250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
Isoform_80084_4	chr18	+	2901	18	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-278	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.5871934353502	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCAAATTGGTGATCT	NA	False	NA	2	True	AATAAA	-14	NA	21194701	21233249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21200688_21200901_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
Isoform_80086_44	chr18	+	4866	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19796	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGATGTTTTATAAGC	4998	False	NA	NA	False	AATAAA	-17	NA	12657051	12716068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
Isoform_80087_5	chr18	+	6052	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19796	1184	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTGTCTACTTGGCTC	4998	False	NA	14	True	GATAAA	-19	NA	12657051	12717254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
Isoform_80088_4	chr18	+	6231	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19801	1368	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACATTGGTGTTTTTCC	5003	False	NA	NA	False	AATATA	-19	NA	12657056	12717438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
Isoform_80090_39	chr18	+	887	7	NNC	ENSMUSG00000062328.9	novel	1326	9	NA	NA	76	-108	at_least_one_novel_splicesite	FALSE	canonical	3	266	junction_1	4216.73927803094	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTTCTGGTGGTCTTT	NA	False	NA	31	True	AATAAA	-31	NA	75133623	75136343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_75133912_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
Isoform_80096_36	chr18	+	2276	4	NNC	ENSMUSG00000102918.2	novel	4687	4	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	99.533355659743	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGACCGCGTCTGTTT	NA	False	NA	15	True	AATAAA	-18	NA	37939471	37974924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_37939631_37958073_37958133_37966317_37966407_37972955
Isoform_80097_4	chr18	+	4401	2	Intergenic	novelGene_5240	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	24	False	NA	NA	False	NA	NA	NA	3000117	3014267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_3000266_3010014
Isoform_80098_3	chr18	+	993	3	NNC	ENSMUSG00000117783.2	novel	937	6	NA	NA	3418	-531	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	1	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAACAATAA	NA	False	NA	NA	False	NA	NA	NA	83377127	83385739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_83377264_83381662_83381799_83385018
Isoform_80099_4	chr18	+	986	5	NNC	ENSMUSG00000117783.2	novel	937	6	NA	NA	3417	260	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	3.57071421427143	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGGTTCCTATATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	83377126	83386530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_83377264_83381662_83381799_83385018_83385238_83385879_83385988_83386144
Isoform_80101_10	chr18	+	2545	17	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	145	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	48.8575736196549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGACTTATTTTTAAA	NA	False	NA	19	True	AATAAA	-19	NA	75152011	75420036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_75152300_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
Isoform_80104_6	chr18	+	4106	21	NNC	ENSMUSG00000024260.15	novel	561	3	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	43.6869259618939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	7569	False	NA	10	True	AATAAA	-22	NA	31768187	31856116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_31768384_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
Isoform_80105_3	chr18	+	2230	20	NNC	ENSMUSG00000053477.19	novel	1959	17	NA	NA	323	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.2799081178644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	4154	False	NA	85	True	NA	NA	NA	69479753	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_69479789_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_80106_12	chr18	+	2069	3	NNC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	2253	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	152.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGGTTTTCAGGGTT	5239	False	NA	17	True	AATAAA	-13	NA	47061301	47067290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_47061413_47061585_47061726_47065472
Isoform_80107_3	chr18	+	2442	20	NNC	ENSMUSG00000053477.19	novel	4250	21	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.2799081178644	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAACAGAAAAACAAA	1566	False	NA	82	True	NA	NA	NA	69477165	69816314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_69477416_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_80108_3	chr18	+	2454	20	NNC	ENSMUSG00000053477.19	novel	4250	21	NA	NA	-48	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6330301489812	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	1569	False	NA	85	True	NA	NA	NA	69477168	69816317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_69477416_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_80110_5	chr18	+	2991	26	NNC	ENSMUSG00000024589.19	novel	2018	17	NA	NA	-29416	1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	32.122615086571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGACAATGAATGGAATT	24	False	NA	NA	False	AATAAA	-17	NA	65247212	65346257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_65247330_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
Isoform_80112_4	chr18	+	2463	5	NNC	ENSMUSG00000044646.16	novel	4572	5	NA	NA	79607	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.4790199457749	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGAAAAAAAAAAATACA	NA	False	NA	NA	False	NA	NA	NA	76032892	76279509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_76033098_76033618_76033833_76144699_76144762_76269897_76271122_76278751
Isoform_80113_3	chr18	+	4157	5	NNC	ENSMUSG00000044646.16	novel	4572	5	NA	NA	79613	-423	intron_retention	FALSE	canonical	0	0	junction_2	1.4790199457749	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGACTGGCTAGTTCTT	NA	False	NA	NA	False	TATAAA	-11	NA	76032898	76281209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_76033098_76033618_76033833_76144699_76144762_76269897_76271122_76278751
Isoform_80116_3	chr18	+	4728	23	NNC	ENSMUSG00000034295.11	novel	5409	27	NA	NA	160376	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.9206894117935	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	25002877	25266558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_25003151_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
Isoform_80119_5	chr18	+	505	2	Intergenic	novelGene_5493	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTCTGAGTTATTG	NA	False	NA	NA	False	NA	NA	NA	69966666	69967867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_69966838_69967533
Isoform_80122_3	chr18	+	4827	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	20061	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.3868704004175	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	5263	False	NA	NA	False	AATAAA	-19	NA	12657316	12716070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_12657402_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
Isoform_80123_3	chr18	+	862	5	NNC	ENSMUSG00000036452.19	novel	607	5	NA	NA	-5238	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11.5758369027902	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGACTTTGAGCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	39419249	39440424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_39419308_39419579_39419740_39429837_39429977_39439754_39439906_39440070
Isoform_80124_5	chr18	+	1173	3	NNC	ENSMUSG00000036299.6	novel	1266	3	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	390	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138944	75143005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_75139285_75141721_75141898_75142348
Isoform_80128_4	chr18	+	2401	3	NNC	ENSMUSG00000063281.10	novel	3040	3	NA	NA	-569	-647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTCTTGCATCGT	490	False	NA	44	True	NA	NA	NA	24122119	24137786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_24122228_24123234_24123448_24135706
Isoform_80129_3	chr18	+	2894	11	NNC	ENSMUSG00000034295.11	novel	5409	27	NA	NA	-35361	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.2687579171173	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	25222056	25266558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_25222137_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
Isoform_80131_4	chr18	+	789	1	Intergenic	novelGene_5241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAACGAAAA	47	False	NA	NA	False	NA	NA	NA	3000140	3000929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_3000100_3000900
Isoform_80132_144	chr18	-	176	1	Intergenic	novelGene_5242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATGCTTAAGG	NA	False	NA	NA	False	NA	NA	NA	3104785	3104609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_3104600_3104800
Isoform_80137_3	chr18	-	3259	1	Intergenic	novelGene_5383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	556	False	NA	NA	False	NA	NA	NA	36700002	36696743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36696700_36700000
Isoform_80138_10	chr18	-	176	1	Intergenic	novelGene_5384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAAAAGCACTGAC	4510	False	NA	NA	False	NA	NA	NA	36708851	36708675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36708700_36708900
Isoform_80139_12	chr18	-	188	1	Intergenic	novelGene_5386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATCATAGTGTGTAT	530	False	NA	NA	False	NA	NA	NA	36734372	36734184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36734200_36734400
Isoform_80143_3	chr18	-	176	1	Intergenic	novelGene_5387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCTCA	9112	False	NA	NA	False	NA	NA	NA	36757115	36756939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36756900_36757100
Isoform_80144_5	chr18	+	189	1	Intergenic	novelGene_5388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTTGTTTTAAGTAAC	1285	False	NA	NA	False	NA	NA	NA	36761538	36761727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_36761500_36761700
Isoform_8015_161	chr10	+	4984	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	250	256	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTAGTCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-18	NA	98750517	98859941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
Isoform_80151_22	chr18	-	179	1	Intergenic	novelGene_5389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAATATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	36828285	36828106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36828100_36828300
Isoform_80153_27	chr18	+	209	1	Intergenic	novelGene_5390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	36845502	36845711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_36845500_36845700
Isoform_80154_3	chr18	-	175	1	Intergenic	novelGene_5391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTAACACATCCATGGA	NA	False	NA	NA	False	NA	NA	NA	36847024	36846849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36846800_36847000
Isoform_80156_3	chr18	-	1185	1	FSM	ENSMUSG00000051439.8	ENSMUST00000237042.2	868	1	481	-798	481	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAATGTGTTTGTTG	NA	False	NA	NA	False	AATAAA	-10	NA	36859310	36858125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36858100_36859300
Isoform_80157_3	chr18	-	1272	1	FSM	ENSMUSG00000051439.8	ENSMUST00000237042.2	868	1	394	-798	394	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAATGTGTTTGTTG	NA	False	NA	NA	False	AATAAA	-10	NA	36859397	36858125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_36858100_36859400
Isoform_80159_13	chr18	-	2109	3	NNC	ENSMUSG00000014294.5	novel	572	3	NA	NA	19	-33	intron_retention	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	75	True	TATAAA	-23	NA	36877591	36875417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_36877026_36877049_36877149_36877189
Isoform_80164_5	chr18	+	177	1	Intergenic	novelGene_5392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAGAGTAGT	379	False	NA	NA	False	NA	NA	NA	36968013	36968190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_36968000_36968200
Isoform_80165_12	chr18	-	181	1	Intergenic	novelGene_5393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTCGAGCCCC	NA	False	NA	NA	False	NA	NA	NA	37179317	37179136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_37179100_37179300
Isoform_80167_6	chr18	-	559	1	Antisense	novelGene_ENSMUSG00000104225.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37752977	37752418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_37752400_37753000
Isoform_80175_4	chr18	+	2809	1	FSM	ENSMUSG00000073590.4	ENSMUST00000097608.3	2831	1	21	1	21	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATGTATATTTTAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	37788980	37791789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_37789000_37791800
Isoform_80176_3	chr18	+	2648	1	NIC	ENSMUSG00000103677.2	novel	4727	4	NA	NA	27	105	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGTTGTATGTGTGTTG	2834	False	NA	NA	False	ATTAAA	-28	NA	37818289	37820937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_37818300_37820900
Isoform_80177_16	chr18	+	216	1	Intergenic	novelGene_5394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTTGTTTTT	NA	False	NA	32	True	NA	NA	NA	37845135	37845351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_37845100_37845400
Isoform_80179_4	chr18	+	3672	1	Genic_Genomic	ENSMUSG00000103585.2_ENSMUSG00000103897.2	novel	NA	NA	NA	NA	-21	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAACGACAAAATAT	NA	False	NA	NA	False	AAGAAA	-29	NA	37858737	37862409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_+_37858700_37862400
Isoform_80180_3	chr18	-	3539	1	Genic_Genomic	ENSMUSG00000097330.3	novel	NA	NA	NA	NA	-34	-9920	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	37901329	37897790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_-_37897800_37901300
Isoform_8019_8	chr10	+	5543	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-49	516	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGCTCCTTGGTTCTCT	NA	False	NA	29	True	AATAAA	-25	NA	98750218	98860201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
Isoform_80193_50	chr18	-	178	1	Intergenic	novelGene_5395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAACTACAATTA	6563	False	NA	NA	False	NA	NA	NA	37992965	37992787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_37992800_37993000
Isoform_80194_2854	chr11	-	473	1	FSM	ENSMUSG00000081604.6	ENSMUST00000118048.2	411	1	-39	-23	-39	23	mono-exon	FALSE	NA	NA	NA	NA	NA	2854	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAAAAAATACAA	NA	False	NA	NA	False	NA	NA	NA	93928493	93928020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_-_93928000_93928500
Isoform_80198_8	chr18	+	213	1	FSM	ENSMUSG00000073640.4	ENSMUST00000097682.4	411	1	243	-45	243	45	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATGTAAATAATTTAAAA	276	False	NA	NA	False	ATTAAA	-21	NA	6332874	6333087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_6332900_6333100
Isoform_8020_94	chr10	+	7046	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	250	-2	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGACTGAACTTTTTG	NA	False	NA	10	True	AATAAA	-22	NA	98750517	98862003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
Isoform_80201_19	chr18	+	180	1	Intergenic	novelGene_5396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGTATTCA	NA	False	NA	NA	False	NA	NA	NA	38008240	38008420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_38008200_38008400
Isoform_80207_10	chr18	-	179	1	Intergenic	novelGene_5397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAATAACCCTTTT	NA	False	NA	NA	False	NA	NA	NA	38360865	38360686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_38360700_38360900
Isoform_80208_44	chr18	-	176	1	Intergenic	novelGene_5398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGTGCTGCTTAC	8287	False	NA	NA	False	NA	NA	NA	38367265	38367089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_38367100_38367300
Isoform_80216_5	chr18	+	232	1	Intergenic	novelGene_5400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACACTATCACAGAATG	NA	False	NA	NA	False	AATAAA	-22	NA	38476035	38476267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_38476000_38476300
Isoform_80219_19	chr18	-	174	1	Intergenic	novelGene_5249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAGTAGTAG	NA	False	NA	NA	False	NA	NA	NA	6460714	6460540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_6460500_6460700
Isoform_8022_19	chr10	+	5273	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-39	256	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTAGTCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-18	NA	98750228	98859941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
Isoform_80220_69	chrX	+	177	1	Intergenic	novelGene_12173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAGAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	126443939	126444116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_126443900_126444100
Isoform_80221_5	chr18	-	1959	1	FSM	ENSMUSG00000084514.2	ENSMUST00000122565.2	83	1	-205	-1671	-205	1671	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTTGTTTT	-13	True	NA	NA	False	ATTAAA	-16	NA	6490851	6488892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_6488900_6490900
Isoform_80223_3	chr18	-	184	1	Intergenic	novelGene_5402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAACTTCTC	NA	False	NA	NA	False	NA	NA	NA	38810177	38809993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_38810000_38810200
Isoform_80224_4	chr18	-	205	1	Intergenic	novelGene_5403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAGAAATT	4145	False	NA	NA	False	NA	NA	NA	38877370	38877165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_38877200_38877400
Isoform_80225_22	chr18	+	207	1	Intergenic	novelGene_5404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCCCTTCCCTCTTTGC	NA	False	NA	NA	False	AAAAAG	-39	NA	39228767	39228974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_39228800_39229000
Isoform_80227_3	chr18	+	178	1	Intergenic	novelGene_5405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACTTCTTGCCCT	NA	False	NA	NA	False	NA	NA	NA	40297105	40297283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_40297100_40297300
Isoform_80228_20	chr18	-	176	1	Intergenic	novelGene_5406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGGAGGAATATT	NA	False	NA	NA	False	NA	NA	NA	40369703	40369527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_40369500_40369700
Isoform_80230_60	chr18	-	176	1	Intergenic	novelGene_5407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	40638863	40638687	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_40638700_40638900
Isoform_80233_74	chr18	-	176	1	Intergenic	novelGene_5408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	42333407	42333231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_42333200_42333400
Isoform_80241_22	chr18	+	174	1	Intergenic	novelGene_5409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGGTAGAAGAA	7922	False	NA	NA	False	NA	NA	NA	42406306	42406480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_42406300_42406500
Isoform_80242_63	chr18	-	171	1	Intergenic	novelGene_5410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGTTTCTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	42440411	42440240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_42440200_42440400
Isoform_80243_7	chr18	+	172	1	Intergenic	novelGene_5411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAAAGA	1586	False	NA	NA	False	NA	NA	NA	42442566	42442738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_42442600_42442700
Isoform_80245_4	chr18	+	176	1	Intergenic	novelGene_5412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42464057	42464233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_42464100_42464200
Isoform_80248_7	chr18	-	205	1	Antisense	novelGene_ENSMUSG00000024491.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACCAACT	NA	False	NA	NA	False	TATAAA	-19	NA	42472232	42472027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_42472000_42472200
Isoform_80250_67	chr18	-	204	1	Intergenic	novelGene_5413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42478975	42478771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_42478800_42479000
Isoform_80252_114	chr18	+	179	1	Intergenic	novelGene_5414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGTTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	42496243	42496422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_42496200_42496400
Isoform_80255_29	chr18	-	174	1	Intergenic	novelGene_5250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAGCCTTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	6759877	6759703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_6759700_6759900
Isoform_80256_20	chr18	-	182	1	Intergenic	novelGene_5415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	42653729	42653547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_42653500_42653700
Isoform_80258_4	chr6	-	157	1	Intergenic	novelGene_9185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	11937614	11937457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_11937500_11937600
Isoform_80260_6	chr18	-	175	1	Intergenic	novelGene_5416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43241427	43241252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_43241300_43241400
Isoform_80261_13	chr18	-	5170	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-39	-2752	-39	2752	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGG	NA	False	NA	NA	False	AATAAA	-18	NA	43610900	43605730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_43605700_43610900
Isoform_80263_235	chr18	-	2393	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-15	1	-15	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCAGGTACAGGCGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	43610876	43608483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_43608500_43610900
Isoform_80267_41	chr18	-	2337	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-38	80	-38	-80	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAGTTTCTAACTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	43610899	43608562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_43608600_43610900
Isoform_80268_541	chr18	-	1809	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-38	608	-38	-608	mono-exon	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTGTTATATCCCAA	NA	False	NA	NA	False	AATAAA	-21	NA	43610899	43609090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_43609100_43610900
Isoform_80282_3	chr18	-	182	1	Intergenic	novelGene_5417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATACAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	43666526	43666344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_43666300_43666500
Isoform_80285_4	chr18	-	407	1	Intergenic	novelGene_5418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAGAAAA	NA	False	NA	NA	False	AAGAAA	-40	NA	44514816	44514409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_44514400_44514800
Isoform_80291_24	chr18	+	1412	1	ISM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	43027	4	43027	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTTTGTGGTTTTTTTG	NA	False	NA	11	True	AATAAA	-16	NA	44556620	44558032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_44556600_44558000
Isoform_80294_5	chr18	+	2261	1	Antisense	novelGene_ENSMUSG00000071856.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAG	3524	False	NA	NA	False	AAGAAA	-37	NA	44560328	44562589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_44560300_44562600
Isoform_80297_8	chr18	-	1274	1	Antisense	novelGene_ENSMUSG00000054477.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGTGTGTCCTTATTG	NA	False	NA	0	True	AATAAA	-27	NA	45692399	45691125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_45691100_45692400
Isoform_80298_3	chr18	-	1801	1	ISM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	43710	132	11622	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTATCTATCTACCT	NA	False	NA	-7	True	NA	NA	NA	46370350	46368549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_46368500_46370400
Isoform_803_1057	SIRV4	+	1566	3	FSM	SIRV4C	SIRV409	1567	3	1	0	1	0	multi-exon	FALSE	canonical	3	1019	junction_2	11.5	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1001	3403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4_+_1347_1678_1886_2389
Isoform_80300_12	chr18	+	179	1	Intergenic	novelGene_5420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTGTTAGGAAGCT	NA	False	NA	NA	False	NA	NA	NA	46443469	46443648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_46443500_46443600
Isoform_80301_6	chr18	-	2394	1	FSM	ENSMUSG00000118282.2	ENSMUST00000237083.2	1810	1	-172	-412	-172	412	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	46490206	46487812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_46487800_46490200
Isoform_80306_5	chr18	+	2405	1	Intergenic	novelGene_5421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46652795	46655200	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_46652800_46655200
Isoform_80307_6	chr18	-	157	1	Intergenic	novelGene_5422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6165	False	NA	NA	False	NA	NA	NA	46667305	46667148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_46667100_46667300
Isoform_80309_4	chr2	+	174	1	Intergenic	novelGene_6730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	163341141	163341315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_163341100_163341300
Isoform_80310_8	chr18	+	195	1	Intergenic	novelGene_5423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTAATTAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	46696404	46696599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_46696400_46696600
Isoform_80355_4	chr18	+	156	1	Intergenic	novelGene_5251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAATAAATAAATTA	1879	False	NA	NA	False	NA	NA	NA	7182979	7183135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_7183000_7183100
Isoform_80356_9	chr18	+	192	1	Intergenic	novelGene_5424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATATTTTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	46872611	46872803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_46872600_46872800
Isoform_80357_25	chr18	+	177	1	Intergenic	novelGene_5252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATGTATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7264096	7264273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_7264100_7264300
Isoform_80358_65	chr10	+	176	1	Intergenic	novelGene_1207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTGCCACAGAT	NA	False	NA	NA	False	NA	NA	NA	120281768	120281944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_120281800_120281900
Isoform_8036_18	chr10	+	5066	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	1	2063	1	257	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTAGTCTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-19	NA	98751014	98859942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
Isoform_80360_9	chr18	-	209	1	Intergenic	novelGene_5426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATATAAAAATCAGTCATA	NA	False	NA	NA	False	NA	NA	NA	47086606	47086397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_47086400_47086600
Isoform_80363_3	chr18	+	341	1	FSM	ENSMUSG00000117621.2	ENSMUST00000234633.2	515	1	190	-16	190	16	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAAAAAAAAATCATCCA	NA	False	NA	NA	False	AATAAA	-9	NA	47245395	47245736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_47245400_47245700
Isoform_80365_20692	chr18	+	1730	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	2	15	2	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	20692	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	48179715	48181445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_48179700_48181400
Isoform_8037_7	chr10	+	5158	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	-93	2065	-93	255	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTTTAGTCTTTTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	98750920	98859940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
Isoform_80383_4	chr18	-	163	1	Intergenic	novelGene_5427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAACAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	49416688	49416525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_49416500_49416700
Isoform_80387_3	chr18	-	187	1	Intergenic	novelGene_5428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAGATAGGGTATAG	NA	False	NA	NA	False	NA	NA	NA	49954706	49954519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_49954500_49954700
Isoform_80389_6	chr18	+	2756	1	Antisense	novelGene_ENSMUSG00000057440.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-25	NA	7456558	7459314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_7456600_7459300
Isoform_8039_12	chr10	+	7128	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	1	1	1	-1	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGACTGAACTTTTTGA	NA	False	NA	11	True	AATAAA	-23	NA	98751014	98862004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
Isoform_80391_7	chr18	+	155	1	Intergenic	novelGene_5429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATCTGAATGTTTG	NA	False	NA	NA	False	NA	NA	NA	50155085	50155240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_50155100_50155200
Isoform_80392_5	chr18	-	541	1	Intergenic	novelGene_5430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGACGATCTGGCACTA	NA	False	NA	NA	False	NA	NA	NA	50286109	50285568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_50285600_50286100
Isoform_80393_178	chr18	+	176	1	Intergenic	novelGene_5431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAAGTGGCTC	NA	False	NA	NA	False	NA	NA	NA	51467556	51467732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_51467600_51467700
Isoform_80395_6	chr18	+	157	1	Intergenic	novelGene_5432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	53586156	53586313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_53586200_53586300
Isoform_80399_32	chr18	-	209	1	Intergenic	novelGene_5433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTCAGCTTCAGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	53897544	53897335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_53897300_53897500
Isoform_804_2057	SIRV4	+	949	2	FSM	SIRV4C	SIRV410	950	2	1	0	1	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1456	2771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV4_+_1886_2251
Isoform_80400_3	chr18	+	164	1	Intergenic	novelGene_5434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	53916731	53916895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_53916700_53916900
Isoform_80402_26	chr18	-	159	1	Intergenic	novelGene_5435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAACTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	53987515	53987356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_53987400_53987500
Isoform_80403_6	chr18	+	5308	1	Genic_Genomic	ENSMUSG00000073563.4	novel	NA	NA	NA	NA	-22	-81264	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53995171	54000479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_+_53995200_54000500
Isoform_80404_4	chr18	+	176	1	Intergenic	novelGene_5436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAATCAAATTAA	NA	False	NA	NA	False	NA	NA	NA	54494708	54494884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_54494700_54494900
Isoform_80406_34	chr10	-	177	1	Intergenic	novelGene_1031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTTCCACTTCAG	NA	False	NA	NA	False	NA	NA	NA	79492784	79492607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_79492600_79492800
Isoform_80410_7	chr18	-	209	1	Intergenic	novelGene_5440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCAATTCCCCCAACTT	NA	False	NA	NA	False	NA	NA	NA	56584850	56584641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_56584600_56584800
Isoform_80411_12	chr18	+	164	1	Intergenic	novelGene_5441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	56649732	56649896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_56649700_56649900
Isoform_80417_260	chr18	-	177	1	Intergenic	novelGene_5443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTCTTTAT	3137	False	NA	-24	True	NA	NA	NA	56788357	56788180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_56788200_56788400
Isoform_80418_25	chr18	-	276	1	Intergenic	novelGene_5444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTAGGGAGGATATGG	NA	False	NA	-1	True	NA	NA	NA	56795332	56795056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_56795100_56795300
Isoform_80421_536	chr18	+	194	1	Intergenic	novelGene_5445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	536	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	56807518	56807712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_56807500_56807700
Isoform_80427_5	chr18	-	5256	1	Intergenic	novelGene_5446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56872085	56866829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_56866800_56872100
Isoform_80438_4	chr18	-	176	1	Intergenic	novelGene_5447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCCAAATAGAG	NA	False	NA	NA	False	NA	NA	NA	57272568	57272392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_57272400_57272600
Isoform_80442_3	chr18	+	215	1	Intergenic	novelGene_5448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGGTTAAAAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	58053730	58053945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_58053700_58053900
Isoform_80447_3	chr18	+	169	1	Intergenic	novelGene_5449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	59197843	59198012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_59197800_59198000
Isoform_80448_13	chr1	+	173	1	Intergenic	novelGene_586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	171092300	171092473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171092300_171092500
Isoform_80449_180	chr18	+	205	1	Intergenic	novelGene_5450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	60612447	60612652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_60612400_60612700
Isoform_80450_11	chr18	+	184	1	Intergenic	novelGene_5451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTGATGAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	60618659	60618843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_60618700_60618800
Isoform_80453_5	chr18	-	977	1	Antisense	novelGene_ENSMUSG00000024603.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-12	NA	60692242	60691265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_60691300_60692200
Isoform_80454_35	chr18	-	177	1	Intergenic	novelGene_5253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCTATT	2874	False	NA	NA	False	NA	NA	NA	7866218	7866041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_7866000_7866200
Isoform_80465_56	chr18	-	167	1	Intergenic	novelGene_5452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATTTATTTATTTATT	264	False	NA	NA	False	NA	NA	NA	61065169	61065002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_61065000_61065200
Isoform_80466_5	chr18	-	176	1	Intergenic	novelGene_5453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATTAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	61115075	61114899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_61114900_61115100
Isoform_80468_9	chr18	-	3005	1	NIC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	4	-6251	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	5828	False	NA	NA	False	NA	NA	NA	61310118	61307113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_61307100_61310100
Isoform_80470_9	chr18	-	178	1	Intergenic	novelGene_5454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGTTAGGAGGCTAG	4499	False	NA	NA	False	NA	NA	NA	61311447	61311269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_61311300_61311400
Isoform_80480_4	chr18	-	2609	1	FSM	ENSMUSG00000105200.3	ENSMUST00000198300.3	66	1	-1099	-1444	-1099	1444	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCTGTATAGTATTTCA	4725	False	NA	NA	False	NA	NA	NA	61532070	61529461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_61529500_61532100
Isoform_80481_10	chr18	-	191	1	Intergenic	novelGene_5455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTACAAGAAGCTCTGC	5531	False	NA	NA	False	NA	NA	NA	61646925	61646734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_61646700_61646900
Isoform_80483_42	chr18	-	177	1	Intergenic	novelGene_5456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTACT	NA	False	NA	NA	False	NA	NA	NA	61670746	61670569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_61670600_61670700
Isoform_80506_20	chr18	+	165	1	Intergenic	novelGene_5457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	61763030	61763195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_61763000_61763200
Isoform_80509_14	chr18	-	167	1	Intergenic	novelGene_5458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCAGAGTGAGCAGAGGT	9974	False	NA	NA	False	NA	NA	NA	61776689	61776522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_61776500_61776700
Isoform_80510_43	chr18	-	192	1	Intergenic	novelGene_5459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	61803973	61803781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_61803800_61804000
Isoform_80512_31	chr18	+	177	1	Intergenic	novelGene_5460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTCAC	NA	False	NA	NA	False	NA	NA	NA	61804069	61804246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_61804100_61804200
Isoform_80514_9	chr18	+	1832	1	FSM	ENSMUSG00000098702.2	ENSMUST00000184181.2	1865	1	31	2	-12	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAACTTGGTCAGACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	61859491	61861323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_61859500_61861300
Isoform_80515_24	chr18	-	2161	1	FSM	ENSMUSG00000045730.5	ENSMUST00000053640.5	2144	1	-18	1	-18	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATTGCACCCGTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	62313048	62310887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_62310900_62313000
Isoform_80516_4	chr18	+	3707	1	Antisense	novelGene_ENSMUSG00000042211.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGACAGCCCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	62673389	62677096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_62673400_62677100
Isoform_80524_7	chr18	-	172	1	Intergenic	novelGene_5461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAAAGATTC	NA	False	NA	NA	False	NA	NA	NA	63259852	63259680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_63259700_63259900
Isoform_80528_30	chr18	+	177	1	Intergenic	novelGene_5462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATAGCACTT	NA	False	NA	NA	False	NA	NA	NA	63902828	63903005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_63902800_63903000
Isoform_80529_11	chr18	-	177	1	Intergenic	novelGene_5463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCATTTTGGGGAT	NA	False	NA	NA	False	NA	NA	NA	63981762	63981585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_63981600_63981800
Isoform_80530_367	chr18	+	178	1	Intergenic	novelGene_5464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATCAA	NA	False	NA	NA	False	NA	NA	NA	64461412	64461590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_64461400_64461600
Isoform_80531_6	chr18	+	187	1	Intergenic	novelGene_5465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCGGATGCACAGTGC	NA	False	NA	NA	False	NA	NA	NA	64490669	64490856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_64490700_64490900
Isoform_80532_3	chr18	-	230	1	Intergenic	novelGene_5466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGTGTAACCCAATAATG	NA	False	NA	NA	False	AAGAAA	-33	NA	64491700	64491470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_64491500_64491700
Isoform_80533_8	chr18	-	174	1	Intergenic	novelGene_5467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	64493880	64493706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_64493700_64493900
Isoform_80535_63	chr18	-	1883	1	FSM	ENSMUSG00000060096.6	ENSMUST00000072796.6	1005	1	-324	-554	-324	554	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGTTGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	64583084	64581201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64581200_64583100
Isoform_80536_68	chr18	-	1336	1	FSM	ENSMUSG00000060096.6	ENSMUST00000072796.6	1005	1	-325	-6	-325	6	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAAGAAGAAAAAACG	NA	False	NA	NA	False	AAGAAA	-28	NA	64583085	64581749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_64581700_64583100
Isoform_8055_47	chr10	+	2901	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	41	-80	-5	-6	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCAATGTCTTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	98942938	99033930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
Isoform_80551_3	chr18	-	154	1	Intergenic	novelGene_5468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	64763896	64763742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_64763700_64763900
Isoform_80553_3	chr18	-	176	1	ISM	ENSMUSG00000114210.3	ENSMUST00000224731.3	3431	2	3079	762	3079	-762	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	65018483	65018307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_-_65018300_65018500
Isoform_80554_46	chr18	-	176	1	Intergenic	novelGene_5469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAGAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	65024919	65024743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_65024700_65024900
Isoform_80555_4	chr18	-	182	1	Intergenic	novelGene_5470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65027206	65027024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_65027000_65027200
Isoform_80558_3	chr18	+	3611	1	FSM	ENSMUSG00000036904.7	ENSMUST00000041080.7	5974	1	90	2273	90	-2273	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAATGATGTTTTTCAT	54	False	NA	NA	False	AGTAAA	-45	NA	9212252	9215863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_9212300_9215900
Isoform_80562_29	chr18	-	186	1	Intergenic	novelGene_5471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTAAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	65522977	65522791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_65522800_65523000
Isoform_80564_91	chr18	+	175	1	Intergenic	novelGene_5472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGCAGAAGC	315	False	NA	NA	False	NA	NA	NA	65588434	65588609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_65588400_65588600
Isoform_80565_6	chr18	+	176	1	Intergenic	novelGene_5473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAGAAATACA	2011	False	NA	NA	False	NA	NA	NA	65590130	65590306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_65590100_65590300
Isoform_8057_120	chr10	+	2862	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	80	-80	13	-6	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCAATGTCTTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	98942977	99033930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
Isoform_80571_24	chr18	-	3083	2	Antisense	novelGene_ENSMUSG00000042439.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-35	NA	65719384	65716258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_65718751_65718793
Isoform_80572_5	chr18	-	5059	2	Antisense	novelGene_ENSMUSG00000042439.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-35	NA	65721360	65716258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_65718751_65718793
Isoform_80574_16	chr18	-	3113	1	Intergenic	novelGene_5475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTTAC	NA	False	NA	NA	False	NA	NA	NA	65742268	65739155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_65739200_65742300
Isoform_80575_18	chr18	-	4671	1	Intergenic	novelGene_5476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTACCAGGAGACATGCA	2516	False	NA	NA	False	NA	NA	NA	65764573	65759902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_65759900_65764600
Isoform_80576_18	chr4	+	196	1	Intergenic	novelGene_7461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTGCCTAGGGTTGG	4901	False	NA	NA	False	NA	NA	NA	32764018	32764214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_32764000_32764200
Isoform_80577_38	chr18	-	175	1	Intergenic	novelGene_5477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAATCAGACCC	2781	False	NA	NA	False	NA	NA	NA	65795705	65795530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_65795500_65795700
Isoform_80578_9	chr18	-	865	1	NIC	ENSMUSG00000024518.5	novel	2323	2	NA	NA	2313	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGTGCTCATCGACTACA	NA	False	NA	NA	False	ATTAAA	-21	NA	66068573	66067708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_66067700_66068600
Isoform_80588_22	chr18	+	180	1	Intergenic	novelGene_5478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATGGGTTTGTCAA	NA	False	NA	NA	False	NA	NA	NA	66357023	66357203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_66357000_66357200
Isoform_8059_5	chr10	+	2792	11	FSM	ENSMUSG00000019952.16	ENSMUST00000159228.8	1799	11	21	-1014	0	-8	multi-exon	FALSE	canonical	2	5	junction_9	25.0896392959325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATCAATGTCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	98942964	99033928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99028643_99028860_99032487
Isoform_80591_11	chr18	-	150	1	Intergenic	novelGene_5479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTATTAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	66598842	66598692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_66598700_66598800
Isoform_80592_7	chr18	-	179	1	Intergenic	novelGene_5480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	66629864	66629685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_66629700_66629900
Isoform_80597_153	chr18	+	2419	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	26	79	26	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCTTAAAATGTGTTC	NA	False	NA	6	True	ATTAAA	-19	NA	67338462	67340881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67338500_67340900
Isoform_80598_8	chr18	+	2488	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	28	8	28	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCATGGGTTATTTCC	NA	False	NA	77	True	CATAAA	-12	NA	67338464	67340952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_67338500_67341000
Isoform_80606_28	chr18	-	189	1	Intergenic	novelGene_5481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACTTCTGAAAACTCC	7178	False	NA	NA	False	AAAACA	-4	NA	67432272	67432083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_67432100_67432300
Isoform_80611_4	chr18	+	186	1	Intergenic	novelGene_5482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAATAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	67490424	67490610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_67490400_67490600
Isoform_80619_13	chr18	+	162	1	Intergenic	novelGene_5483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTAATGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	67560388	67560550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_67560400_67560600
Isoform_8062_3	chr10	+	3372	11	FSM	ENSMUSG00000019952.16	ENSMUST00000159990.2	3449	11	70	7	70	-7	multi-exon	FALSE	canonical	3	64	junction_10	9.48946784598589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCAATGTCTTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	98943034	99033929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
Isoform_80621_3	chr18	+	676	1	NIC	ENSMUSG00000024530.9	novel	1404	7	NA	NA	0	-8738	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGCTTCCTTATTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	67597953	67598629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_67598000_67598600
Isoform_80622_11	chr18	-	169	1	Intergenic	novelGene_5484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATTTGCCT	7387	False	NA	NA	False	NA	NA	NA	67603499	67603330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_67603300_67603500
Isoform_80623_39	chr18	+	154	1	Intergenic	novelGene_5485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTCATTAGTAA	NA	False	NA	NA	False	NA	NA	NA	67616249	67616403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_67616200_67616400
Isoform_80624_13	chr18	+	2294	1	Antisense	novelGene_ENSMUSG00000024533.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67633376	67635670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_67633400_67635700
Isoform_80625_8	chr15	-	411	1	Intergenic	novelGene_3853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	1798	False	NA	NA	False	NA	NA	NA	39110872	39110461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_39110500_39110900
Isoform_80626_3	chr2	-	323	1	Intergenic	novelGene_6257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	61819083	61818760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_61818800_61819100
Isoform_80627_179	chr18	+	5188	1	Intergenic	novelGene_5254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	9592764	9597952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_9592800_9598000
Isoform_8063_24	chr10	+	2716	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	75	5	75	-5	multi-exon	FALSE	canonical	2	10	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCGTGTTTTTATTT	NA	False	NA	4	True	AATAAA	-14	NA	99099167	99103345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_99099954_99100405_99100844_99101853
Isoform_8064_17	chr10	+	2792	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	0	4	0	-4	multi-exon	TRUE	canonical	2	10	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGCGTGTTTTTATTTT	NA	False	NA	5	True	AATAAA	-15	NA	99099092	99103346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_99099954_99100405_99100844_99101853
Isoform_80651_14	chr10	-	168	1	Intergenic	novelGene_942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGACATTTC	NA	False	NA	NA	False	NA	NA	NA	64544635	64544467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_64544500_64544600
Isoform_80654_16	chr18	-	180	1	Intergenic	novelGene_5486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGGCGGAGTCACA	NA	False	NA	NA	False	NA	NA	NA	67732571	67732391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_67732400_67732600
Isoform_80656_433	chr11	+	175	1	Intergenic	novelGene_2306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATCAGCCTTAAC	8553	False	NA	NA	False	NA	NA	NA	116317390	116317565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_116317400_116317600
Isoform_80658_44	chr18	+	176	1	Intergenic	novelGene_5276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	17170563	17170739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_17170600_17170700
Isoform_8066_12	chr10	+	5448	10	FSM	ENSMUSG00000019966.19	ENSMUST00000105283.9	5648	10	196	4	0	-4	multi-exon	FALSE	canonical	2	4	junction_9	4.46661138716484	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTGCCCTCTCATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	99851687	99936274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_99851898_99887707_99887822_99899945_99900009_99912596_99912768_99915835_99915993_99916718_99916803_99923208_99923319_99924014_99924083_99925057_99925134_99931879
Isoform_80660_11	chr2	+	192	1	Intergenic	novelGene_6132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAATAACAGTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	32130185	32130377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_32130200_32130400
Isoform_80663_3	chr18	-	1984	1	Genic_Genomic	ENSMUSG00000097835.2	novel	NA	NA	NA	NA	-378	460	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	67908305	67906321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_-_67906300_67908300
Isoform_80664_33	chr18	-	1270	1	Genic_Genomic	ENSMUSG00000118134.2	novel	NA	NA	NA	NA	22929	288	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67910084	67908814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_-_67908800_67910100
Isoform_80668_110	chr18	-	176	1	Intergenic	novelGene_5488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67958339	67958163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_67958200_67958300
Isoform_80670_49	chr18	-	175	1	Intergenic	novelGene_5489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATGGCC	NA	False	NA	NA	False	NA	NA	NA	68038191	68038016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_68038000_68038200
Isoform_80671_8	chr18	+	171	1	Intergenic	novelGene_5490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	68137248	68137419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_68137200_68137400
Isoform_80673_3	chr18	+	5158	1	NIC	ENSMUSG00000024544.10	novel	3031	6	NA	NA	35345	-61	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCAAACCTATCTTTGT	NA	False	NA	NA	False	NA	NA	NA	68396482	68401640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_68396500_68401600
Isoform_80676_35	chr18	-	2571	1	Intergenic	novelGene_5491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69501012	69498441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_69498400_69501000
Isoform_80677_16	chr18	-	1747	1	Intergenic	novelGene_5492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	69642604	69640857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_69640900_69642600
Isoform_80682_3	chr18	+	181	1	Intergenic	novelGene_5494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGACATATTCAAGT	NA	False	NA	NA	False	NA	NA	NA	70729456	70729637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_70729500_70729600
Isoform_80685_51	chr18	-	180	1	Intergenic	novelGene_5495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGTAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	73623977	73623797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_73623800_73624000
Isoform_80687_7	chr18	+	174	1	Intergenic	novelGene_5496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAGAACCCCCCATTG	NA	False	NA	NA	False	NA	NA	NA	73697835	73698009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_73697800_73698000
Isoform_80694_5	chr18	-	479	1	Intergenic	novelGene_5497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATCCTGTGCTCACTCG	2167	False	NA	NA	False	ATTAAA	-17	NA	73768341	73767862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_73767900_73768300
Isoform_80696_13	chr18	+	172	1	Intergenic	novelGene_5498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTTAAAAAAAATTCTC	NA	False	NA	NA	False	NA	NA	NA	73897516	73897688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_73897500_73897700
Isoform_8070_12	chr10	+	8181	53	NIC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	23	junction_17	7.43263633176255	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACAGTCATAATTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	100323422	100409511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
Isoform_80701_64	chr18	-	176	1	Intergenic	novelGene_5499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGTAGCAACAAAA	8931	False	NA	NA	False	NA	NA	NA	74207011	74206835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_74206800_74207000
Isoform_80702_9	chr18	+	188	1	Intergenic	novelGene_5500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	74299541	74299729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_74299500_74299700
Isoform_80704_13	chr18	-	174	1	Intergenic	novelGene_5501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTACCATGAA	NA	False	NA	NA	False	NA	NA	NA	74835471	74835297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_74835300_74835500
Isoform_80707_42	chr18	-	172	1	Intergenic	novelGene_5255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATATGGTAATTCTC	3492	False	NA	NA	False	NA	NA	NA	10026589	10026417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_10026400_10026600
Isoform_80708_20	chr18	+	231	1	Intergenic	novelGene_5502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTTGGGAAGC	NA	False	NA	NA	False	NA	NA	NA	75096634	75096865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_75096600_75096900
Isoform_80709_4	chr18	+	339	1	Intergenic	novelGene_5503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	75096634	75096973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_75096600_75097000
Isoform_8071_5	chr10	+	9091	53	NIC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	-4	-288	combination_of_known_junctions	FALSE	canonical	3	23	junction_17	7.43263633176255	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCTTCTTGGTCACGAT	NA	False	NA	NA	False	NA	NA	NA	100323415	100410414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
Isoform_80712_7	chr18	+	176	1	Intergenic	novelGene_5504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGACAAAG	NA	False	NA	NA	False	NA	NA	NA	75130951	75131127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_75131000_75131100
Isoform_80713_9	chr18	+	509	1	NIC	ENSMUSG00000062328.9	novel	1326	9	NA	NA	45	-2350	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACACACCAAAAAAAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	75133592	75134101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_75133600_75134100
Isoform_80715_4	chr18	-	349	1	Intergenic	novelGene_5505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATACAA	NA	False	NA	NA	False	CATAAA	-18	NA	75136961	75136612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_75136600_75137000
Isoform_80716_10	chr18	+	4049	1	Genic_Genomic	ENSMUSG00000036299.6	novel	NA	NA	NA	NA	-14	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138956	75143005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_+_75139000_75143000
Isoform_80717_7	chr18	-	177	1	Antisense	novelGene_ENSMUSG00000036299.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGGAGCAAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	75141621	75141444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_75141400_75141600
Isoform_80718_4	chr18	-	302	1	Intergenic	novelGene_5506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAATAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	75147546	75147244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_75147200_75147500
Isoform_80719_5	chr18	-	176	1	Intergenic	novelGene_5507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGAGCTAGCAGGAAC	NA	False	NA	NA	False	NA	NA	NA	75147545	75147369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_75147400_75147500
Isoform_80720_18	chr18	-	202	1	Intergenic	novelGene_5508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTTCCCAATCCTGT	NA	False	NA	NA	False	NA	NA	NA	75156092	75155890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_75155900_75156100
Isoform_80721_6	chr18	+	176	1	Intergenic	novelGene_5256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAGAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	10037753	10037929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_10037800_10037900
Isoform_80722_93	chr18	-	174	1	Intergenic	novelGene_5509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	75225937	75225763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_75225800_75225900
Isoform_80723_15	chr18	+	173	1	Intergenic	novelGene_5510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGACTTTCAAGT	NA	False	NA	NA	False	NA	NA	NA	75468331	75468504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_75468300_75468500
Isoform_80724_3	chr18	-	169	1	Intergenic	novelGene_5511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAGAAAGAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	75490612	75490443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_75490400_75490600
Isoform_80725_9	chr18	+	172	1	Intergenic	novelGene_5512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCTTTAAAGAAGAGAG	6176	False	NA	NA	False	NA	NA	NA	75494605	75494777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_75494600_75494800
Isoform_80727_7	chr18	-	1776	1	Antisense	novelGene_ENSMUSG00000025880.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACG	NA	False	NA	NA	False	NA	NA	NA	75503359	75501583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_75501600_75503400
Isoform_80736_11	chr18	+	3082	1	Intergenic	novelGene_5513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75644491	75647573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_75644500_75647600
Isoform_80737_3	chr18	+	185	1	Intergenic	novelGene_5514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAATCCTT	NA	False	NA	NA	False	NA	NA	NA	75858299	75858484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_75858300_75858500
Isoform_80739_74	chr18	+	185	1	Intergenic	novelGene_5515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAACGAGGAAGTGAGTA	NA	False	NA	NA	False	NA	NA	NA	76057714	76057899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_76057700_76057900
Isoform_8074_14	chr10	+	1492	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-8	-1786	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTATCATTTATAGTAA	NA	False	NA	4	True	ATTAAA	-17	NA	103203635	103231233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
Isoform_80742_11	chr18	-	187	1	Intergenic	novelGene_5516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCCAGTTTTGAACACT	NA	False	NA	NA	False	NA	NA	NA	76476978	76476791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_76476800_76477000
Isoform_80743_3	chr18	+	162	1	Intergenic	novelGene_5517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAATCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	76490897	76491059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_76490900_76491100
Isoform_80744_32	chr18	-	173	1	Intergenic	novelGene_5518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	76972628	76972455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_76972500_76972600
Isoform_80746_3	chr18	-	173	1	Intergenic	novelGene_5519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	77079971	77079798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77079800_77080000
Isoform_80748_32	chr18	-	176	1	Intergenic	novelGene_5520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTAAAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	77118457	77118281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77118300_77118500
Isoform_8075_4	chr10	+	1641	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-160	-1789	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTAGTATCATTTATAG	NA	False	NA	1	True	ATTAAA	-14	NA	103203483	103231230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
Isoform_80750_9	chr18	-	181	1	Intergenic	novelGene_5521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGGAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	77129184	77129003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77129000_77129200
Isoform_80751_13	chr18	-	173	1	Intergenic	novelGene_5522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77168039	77167866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77167900_77168000
Isoform_80754_28	chr18	+	174	1	Intergenic	novelGene_5523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCCTTTACATTT	4689	False	NA	NA	False	NA	NA	NA	77190791	77190965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_77190800_77191000
Isoform_80755_8	chr18	-	3582	1	Antisense	novelGene_ENSMUSG00000025423.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACCAAACATAAAA	NA	False	NA	NA	False	NA	NA	NA	77217404	77213822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_77213800_77217400
Isoform_80756_3	chr18	-	968	1	Antisense	novelGene_ENSMUSG00000025423.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77220809	77219841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_77219800_77220800
Isoform_80757_22	chr18	-	702	1	Intergenic	novelGene_5524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77232679	77231977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77232000_77232700
Isoform_80759_52	chr18	-	177	1	Intergenic	novelGene_5525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTGTAAGCTTAT	5958	False	NA	NA	False	NA	NA	NA	77456234	77456057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77456100_77456200
Isoform_8076_7	chr10	+	3465	12	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	169	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	31.6193789307593	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGGAGTTCGTGTCCCT	NA	False	NA	NA	False	AATAAA	-11	NA	103203872	103255232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
Isoform_80761_8	chr18	+	176	1	Intergenic	novelGene_5526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTAAATTTGGA	NA	False	NA	NA	False	NA	NA	NA	77663932	77664108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_77663900_77664100
Isoform_80762_86	chr18	-	178	1	Intergenic	novelGene_5527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	77700016	77699838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77699800_77700000
Isoform_80769_181	chr18	-	175	1	Intergenic	novelGene_5528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAATAAAAAA	6786	False	NA	NA	False	NA	NA	NA	77725945	77725770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77725800_77725900
Isoform_80771_8	chr18	+	190	1	Intergenic	novelGene_5243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	9365	False	NA	NA	False	NA	NA	NA	3347577	3347767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_3347600_3347800
Isoform_80773_20	chr18	+	197	1	Intergenic	novelGene_5530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTATGATTTTGTTTGT	NA	False	NA	NA	False	AATAGA	-11	NA	77766409	77766606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_77766400_77766600
Isoform_80774_5	chr18	+	2045	1	Intergenic	novelGene_5531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAGGGAGGGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	77773144	77775189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_77773100_77775200
Isoform_80776_4	chr18	+	178	1	Intergenic	novelGene_5532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	5847	False	NA	NA	False	NA	NA	NA	77787696	77787874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_77787700_77787900
Isoform_80777_234	chr18	-	213	1	Intergenic	novelGene_5533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTTTTTACAGTTTT	NA	False	NA	NA	False	NA	NA	NA	77798211	77797998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77798000_77798200
Isoform_80779_5	chr18	+	157	1	Intergenic	novelGene_5534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATCAAAAAAAA	6077	False	NA	NA	False	NA	NA	NA	77806269	77806426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_77806300_77806400
Isoform_80782_21	chr18	-	318	1	Intergenic	novelGene_5535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGAGACGGCTCAGTG	NA	False	NA	NA	False	GGGGCT	-13	NA	77811475	77811157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77811200_77811500
Isoform_80785_5	chr18	-	733	1	Intergenic	novelGene_5258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10276043	10275310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_10275300_10276000
Isoform_80786_6	chr18	-	176	1	Intergenic	novelGene_5536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	77815605	77815429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77815400_77815600
Isoform_80787_4	chr18	-	181	1	Intergenic	novelGene_5537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGTGCCAGACAGT	NA	False	NA	NA	False	NA	NA	NA	77816402	77816221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77816200_77816400
Isoform_80789_3	chr18	+	339	1	Intergenic	novelGene_5538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAATAAGA	1079	False	NA	NA	False	NA	NA	NA	77826469	77826808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_77826500_77826800
Isoform_80791_154	chr18	-	176	1	Intergenic	novelGene_5539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77845171	77844995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77845000_77845200
Isoform_80792_4	chr18	-	224	1	Intergenic	novelGene_5259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGTAATTAAGAATATCG	NA	False	NA	NA	False	NA	NA	NA	10286574	10286350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_10286400_10286600
Isoform_8080_7	chr10	+	1371	5	ISM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-42	24003	-17	-1786	5prime_fragment	FALSE	canonical	3	31	junction_1	35.7596140918774	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTATCATTTATAGTAA	NA	False	NA	4	True	ATTAAA	-17	NA	103203626	103231233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850
Isoform_80804_9	chr18	-	215	2	Intergenic	novelGene_5540	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	40	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTTTTAAGAACTGTGGTT	NA	False	NA	NA	False	AATAAA	-19	NA	77875400	77875153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77875196_77875227
Isoform_80805_443	chr18	-	171	1	Intergenic	novelGene_5541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	443	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	77875399	77875228	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77875200_77875400
Isoform_80806_5	chr18	-	176	1	Intergenic	novelGene_5260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	10321099	10320923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_10320900_10321100
Isoform_80807_4	chr18	-	158	1	Intergenic	novelGene_5542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATCAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	77893218	77893060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_77893100_77893200
Isoform_80809_11	chr18	+	179	1	Intergenic	novelGene_5543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATGCATGGCTTC	NA	False	NA	NA	False	NA	NA	NA	77917032	77917211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_77917000_77917200
Isoform_8081_4	chr10	+	2341	5	ISM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-77	23068	-52	-851	5prime_fragment	FALSE	canonical	3	31	junction_1	35.7596140918774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTGATTTTAATATATT	NA	False	NA	NA	False	AATAAA	-22	NA	103203591	103232168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850
Isoform_80812_3	chr18	+	459	1	Intergenic	novelGene_5544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	77974575	77975034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_77974600_77975000
Isoform_80813_10	chr18	-	159	1	Intergenic	novelGene_5545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATTTTTATTAAG	NA	False	NA	NA	False	NA	NA	NA	79983783	79983624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_79983600_79983800
Isoform_80814_4	chr18	+	1439	1	FSM	ENSMUSG00000118357.2	ENSMUST00000237241.2	246	1	-289	-904	-289	904	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAGGAAAAAAAC	NA	False	NA	NA	False	ATTAAA	-8	NA	80059210	80060649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80059200_80060600
Isoform_80815_14	chr18	+	1429	1	FSM	ENSMUSG00000117949.2	ENSMUST00000236190.2	253	1	-914	-262	-914	262	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAGGAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	80062479	80063908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_80062500_80063900
Isoform_80816_7	chr18	+	179	1	Intergenic	novelGene_5546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCCTTATAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	80079157	80079336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_80079200_80079300
Isoform_80819_43	chr18	+	1847	1	Intergenic	novelGene_5547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCAACAGCGTCACCCA	NA	False	NA	NA	False	NA	NA	NA	80165985	80167832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_80166000_80167800
Isoform_8082_10	chr10	+	3642	12	FSM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-97	-2	-72	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2574867983458	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103203571	103255238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
Isoform_8083_16	chr10	+	3578	12	FSM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-33	-2	-8	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2574867983458	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103203635	103255238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
Isoform_80835_72	chr18	+	174	1	Intergenic	novelGene_5548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATATGT	4654	False	NA	NA	False	NA	NA	NA	80211848	80212022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_80211800_80212000
Isoform_80839_39	chr18	-	1814	1	Antisense	novelGene_ENSMUSG00000024571.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCCCCAAAATTTAT	4855	False	NA	NA	False	NA	NA	NA	80252587	80250773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_80250800_80252600
Isoform_80848_4	chr18	+	1391	1	ISM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	17663	7	9078	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTACTTCTTGGTCATG	3217	False	NA	0	True	NA	NA	NA	80267672	80269063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_80267700_80269100
Isoform_80849_11	chr18	-	176	1	Intergenic	novelGene_5549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGGTTTGTCTAGAG	NA	False	NA	NA	False	NA	NA	NA	80543405	80543229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_80543200_80543400
Isoform_8085_3	chr10	+	3726	12	FSM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-187	4	-162	-4	multi-exon	FALSE	canonical	3	31	junction_1	32.2574867983458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGGAGTTCGTGTCCCT	NA	False	NA	NA	False	AATAAA	-11	NA	103203481	103255232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
Isoform_80850_6	chr18	-	838	1	NIC	ENSMUSG00000024566.11	novel	2533	5	NA	NA	-1	-23779	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAAAAAAAATACCGA	9745	False	NA	NA	False	AATATA	-5	NA	80977274	80976436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_80976400_80977300
Isoform_80851_51	chr5	+	178	1	Intergenic	novelGene_8839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118581114	118581292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_118581100_118581300
Isoform_80852_8	chr18	-	177	1	Intergenic	novelGene_5550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTTTTAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	82164430	82164253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_82164300_82164400
Isoform_80853_2100	chr18	+	1621	1	FSM	ENSMUSG00000058625.7	ENSMUST00000078739.7	1355	1	-102	-164	-102	164	mono-exon	FALSE	NA	NA	NA	NA	NA	2100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGCAACATT	NA	False	NA	NA	False	AGTAAA	-26	NA	82356484	82358105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_82356500_82358100
Isoform_8086_3	chr10	+	1176	2	FSM	ENSMUSG00000095022.9	ENSMUST00000181707.2	1185	2	-24	33	-24	-33	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAAGTATTCTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	104021784	104023828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_104021854_104022721
Isoform_80865_13	chr18	-	176	1	Intergenic	novelGene_5261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAGGTGGTTAATGA	2775	False	NA	NA	False	NA	NA	NA	10592166	10591990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_10592000_10592200
Isoform_80866_3	chr18	+	1588	1	NIC	ENSMUSG00000041607.18	novel	2492	7	NA	NA	20779	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCTTTGCCCAGGTGTC	NA	False	NA	14	True	AATAAA	-15	NA	82602165	82603753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_82602200_82603800
Isoform_80867_6	chr18	-	178	1	Intergenic	novelGene_5551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGAGAGATCT	NA	False	NA	NA	False	NA	NA	NA	82661920	82661742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_82661700_82661900
Isoform_80869_4	chr18	+	159	1	Intergenic	novelGene_5552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82729792	82729951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_82729800_82730000
Isoform_80870_3	chr18	-	159	1	Intergenic	novelGene_5553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	82749186	82749027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_82749000_82749200
Isoform_80872_6	chr18	-	193	1	Intergenic	novelGene_5554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCAAACTTGGA	2247	False	NA	NA	False	NA	NA	NA	82796528	82796335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_82796300_82796500
Isoform_80873_4	chr18	-	1499	1	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	11	-12694	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCTTAAT	-16	True	NA	NA	False	ACTAAA	-23	NA	10610098	10608599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_10608600_10610100
Isoform_80874_3	chr18	+	1176	1	Antisense	novelGene_ENSMUSG00000024293.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGATGATTTGCTAC	NA	False	NA	NA	False	AATAAA	-15	NA	10609689	10610865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_10609700_10610900
Isoform_80875_14	chr18	-	172	1	Intergenic	novelGene_5555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	82893659	82893487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_82893500_82893700
Isoform_80877_12	chr18	+	173	1	Intergenic	novelGene_5556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	82954420	82954593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_82954400_82954600
Isoform_80878_29	chr11	+	177	1	Intergenic	novelGene_1325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCCCATC	8653	False	NA	NA	False	NA	NA	NA	4995610	4995787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_4995600_4995800
Isoform_8088_6	chr10	+	1227	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181615.8	1258	2	-1	32	-1	-32	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACAAGTATTCTGGAG	NA	False	NA	NA	False	AATAAA	-13	NA	104029901	104032351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_104030009_104031231
Isoform_80884_3	chr18	+	2149	1	Antisense	novelGene_ENSMUSG00000048410.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84607664	84609813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_84607700_84609800
Isoform_80885_14	chr18	+	180	1	Intergenic	novelGene_5558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAAAAAG	468	False	NA	NA	False	NA	NA	NA	84713005	84713185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_84713000_84713200
Isoform_80886_16	chr8	-	177	1	Intergenic	novelGene_10703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	71032489	71032312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_71032300_71032500
Isoform_80887_6	chr18	+	3386	1	NIC	ENSMUSG00000024646.15	novel	833	5	NA	NA	-9	-18829	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	84869492	84872878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_84869500_84872900
Isoform_8089_20	chr10	+	1189	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181036.2	1197	2	-24	32	-24	-32	multi-exon	FALSE	canonical	3	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACAAGTATTCTGGAG	NA	False	NA	NA	False	AATAAA	-13	NA	104030293	104032351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_104030363_104031231
Isoform_80890_5	chr18	-	2509	1	Intergenic	novelGene_5560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCATGGCTCTTGCAGC	NA	False	NA	NA	False	NA	NA	NA	84956808	84954299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_84954300_84956800
Isoform_80891_5	chr18	-	8008	2	NNC	ENSMUSG00000024645.6	novel	673	2	NA	NA	75	6266	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAAACTTCCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	84966098	84958049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_-_84960099_84960139
Isoform_80893_13	chr18	-	2221	1	Intergenic	novelGene_5561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84993798	84991577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_84991600_84993800
Isoform_80900_18	chr18	-	176	1	Intergenic	novelGene_5562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCCAGCTTTAC	NA	False	NA	NA	False	NA	NA	NA	85730181	85730005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_85730000_85730200
Isoform_80903_17	chr18	-	194	1	Intergenic	novelGene_5563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	88849851	88849657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_88849700_88849900
Isoform_80907_33	chr18	+	177	1	Intergenic	novelGene_5564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	89969303	89969480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_89969300_89969500
Isoform_80910_6	chr18	+	199	1	Intergenic	novelGene_5565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAACTCTT	NA	False	NA	NA	False	NA	NA	NA	90595095	90595294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_90595100_90595300
Isoform_80911_5	chr18	-	243	1	Intergenic	novelGene_5566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCTGTGGCAGGCAA	NA	False	NA	NA	False	NA	NA	NA	90596381	90596138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_90596100_90596400
Isoform_80912_7	chr18	+	831	1	NIC	ENSMUSG00000110277.3	novel	2003	4	NA	NA	-7	-8965	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90597912	90598743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_90597900_90598700
Isoform_80925_11	chr18	+	183	1	Intergenic	novelGene_5262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTAAGGAATACT	7317	False	NA	NA	False	NA	NA	NA	11640689	11640872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_11640700_11640900
Isoform_80926_12	chr18	-	198	1	Intergenic	novelGene_5263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAATAAAGGTAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	11744890	11744692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_11744700_11744900
Isoform_80927_10	chr18	-	2338	1	FSM	ENSMUSG00000117634.2	ENSMUST00000235010.2	2365	1	21	6	21	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATATTTTTGAAGCTA	NA	False	NA	NA	False	NA	NA	NA	11790820	11788482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_11788500_11790800
Isoform_80929_24	chr18	-	190	1	Intergenic	novelGene_5264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTGCTAGGAACT	NA	False	NA	NA	False	NA	NA	NA	11832428	11832238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_11832200_11832400
Isoform_80930_11	chr18	+	178	1	Intergenic	novelGene_5265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAACAAATAG	NA	False	NA	NA	False	NA	NA	NA	11912305	11912483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_11912300_11912500
Isoform_80931_3	chr18	+	1765	1	NIC	ENSMUSG00000040957.16	novel	3396	10	NA	NA	272	-104254	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGACTACCTTAGTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	11972602	11974367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_11972600_11974400
Isoform_80932_4	chr18	+	172	1	Intergenic	novelGene_5266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAATATAATCT	NA	False	NA	NA	False	NA	NA	NA	11987192	11987364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_11987200_11987400
Isoform_80933_11	chr18	-	176	1	Intergenic	novelGene_5267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	12063053	12062877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_12062900_12063100
Isoform_80934_209	chr13	-	172	1	Intergenic	novelGene_2925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	14152839	14152667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_14152700_14152800
Isoform_80948_56	chr18	-	178	1	Intergenic	novelGene_5269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	14082938	14082760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_14082800_14082900
Isoform_80950_15	chr18	+	6943	1	FSM	ENSMUSG00000096528.2	ENSMUST00000179907.2	2686	1	1	-4258	1	4258	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	3471630	3478573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_3471600_3478600
Isoform_80954_10	chr18	+	1262	1	Intergenic	novelGene_5270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGCACTCTAGACTTG	NA	False	NA	NA	False	NA	NA	NA	14754872	14756134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_14754900_14756100
Isoform_80958_35	chr18	-	176	1	Intergenic	novelGene_5271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAGAGAGACT	NA	False	NA	NA	False	NA	NA	NA	14835864	14835688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_14835700_14835900
Isoform_80961_4	chr18	-	172	1	Intergenic	novelGene_5272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	15252467	15252295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_15252300_15252500
Isoform_80965_24	chr18	+	350	1	FSM	ENSMUSG00000058064.7	ENSMUST00000079733.7	534	1	227	-43	227	43	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAGGAAAAATG	NA	False	NA	NA	False	AATAAA	-40	NA	15966077	15966427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_15966100_15966400
Isoform_80966_37	chr18	+	307	1	FSM	ENSMUSG00000058064.7	ENSMUST00000079733.7	534	1	269	-42	269	42	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGGAAAAAT	NA	False	NA	NA	False	AATAAA	-39	NA	15966119	15966426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_15966100_15966400
Isoform_80970_32	chr18	-	183	1	Intergenic	novelGene_5273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATCAAAGA	NA	False	NA	NA	False	NA	NA	NA	16122722	16122539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_16122500_16122700
Isoform_80972_49	chr18	+	179	1	Intergenic	novelGene_5274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	16603158	16603337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_16603200_16603300
Isoform_80973_11	chr18	+	4204	1	Intergenic	novelGene_5275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	16983731	16987935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_16983700_16987900
Isoform_80975_6	chr18	+	163	1	Intergenic	novelGene_5277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGGCCAGGCCGTGG	NA	False	NA	NA	False	NA	NA	NA	17488191	17488354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_17488200_17488400
Isoform_80977_15	chr18	-	339	1	Intergenic	novelGene_5279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	18235452	18235113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_18235100_18235500
Isoform_80978_179	chr18	-	176	1	Intergenic	novelGene_5280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATATTTTTTATTA	NA	False	NA	-1	True	NA	NA	NA	19051307	19051131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_19051100_19051300
Isoform_80979_14	chr18	+	181	1	Intergenic	novelGene_5281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACATACCAGAAGAG	NA	False	NA	18	True	NA	NA	NA	20144096	20144277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_20144100_20144300
Isoform_80985_3	chr18	-	275	1	Intergenic	novelGene_5282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	8399	False	NA	NA	False	NA	NA	NA	20738013	20737738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_20737700_20738000
Isoform_80986_5	chr18	+	193	1	Intergenic	novelGene_5283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTACGTTGCTTTTGG	251	False	NA	NA	False	NA	NA	NA	20782853	20783046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_20782900_20783000
Isoform_8099_116	chr10	+	992	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	414	407	-23	-407	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCTCACAGTGAGATA	NA	False	NA	10	True	AATATA	-16	NA	105677341	105683287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
Isoform_80991_13	chr18	+	217	1	Intergenic	novelGene_5284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAACATGATTTGAT	NA	False	NA	NA	False	NA	NA	NA	20850906	20851123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_20850900_20851100
Isoform_80993_7	chr18	+	3211	1	Intergenic	novelGene_5285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-17	NA	20873132	20876343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_20873100_20876300
Isoform_80994_6	chr18	+	3377	1	Antisense	novelGene_ENSMUSG00000056124.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCAGAATTCTGCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	20878411	20881788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_20878400_20881800
Isoform_8100_38	chr10	+	1390	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	422	1	-15	-1	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGTGTAATAGAAGCGT	NA	False	NA	NA	False	AATAAA	-17	NA	105677349	105683693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
Isoform_81000_5	chr18	-	178	1	Intergenic	novelGene_5286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCTAAAATTGA	NA	False	NA	NA	False	NA	NA	NA	20976114	20975936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_20975900_20976100
Isoform_81001_4	chr18	+	176	1	Intergenic	novelGene_5287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	21021918	21022094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_21021900_21022100
Isoform_81003_4	chr18	+	154	1	Intergenic	novelGene_5288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAGATAGATAGATA	NA	False	NA	NA	False	NA	NA	NA	21045636	21045790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_21045600_21045800
Isoform_81006_11	chr18	-	201	1	Intergenic	novelGene_5289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGGCCTGGATTAGTG	NA	False	NA	NA	False	NA	NA	NA	21054494	21054293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_21054300_21054500
Isoform_81008_8	chr18	+	2972	1	Intergenic	novelGene_5290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21063198	21066170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_21063200_21066200
Isoform_81009_6	chr18	+	2392	1	Genic_Genomic	ENSMUSG00000033107.7	novel	NA	NA	NA	NA	-14	-36722	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	5327	False	NA	NA	False	NA	NA	NA	21077667	21080059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_+_21077700_21080100
Isoform_81010_3	chr18	-	996	1	Antisense	novelGene_ENSMUSG00000033107.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTGGGGCATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	21094854	21093858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_21093900_21094900
Isoform_81012_290	chr18	-	4071	1	FSM	ENSMUSG00000073647.5	ENSMUST00000097690.5	619	1	-312	-3140	-312	3140	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTAATTACTATCATCA	-1	True	NA	NA	False	NA	NA	NA	4199250	4195179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_4195200_4199200
Isoform_81037_4	chr18	-	176	1	Intergenic	novelGene_5291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTATTTTGCC	4572	False	NA	NA	False	NA	NA	NA	21144348	21144172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_21144200_21144300
Isoform_81038_7	chr18	-	250	1	Intergenic	novelGene_5245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCACCTAACAATTTTT	NA	False	NA	NA	False	NA	NA	NA	4319612	4319362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_4319400_4319600
Isoform_8104_10	chr10	+	1036	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	364	413	-73	-413	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGTCTGAGCTCACAGT	NA	False	NA	4	True	AATATA	-10	NA	105677291	105683281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
Isoform_81040_15	chr18	+	177	1	Intergenic	novelGene_5292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGTAGAAATAAT	NA	False	NA	NA	False	NA	NA	NA	21173134	21173311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_21173100_21173300
Isoform_81042_30	chr18	-	185	1	Intergenic	novelGene_5293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGCCATTAGCTA	NA	False	NA	NA	False	NA	NA	NA	21523153	21522968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_21523000_21523200
Isoform_81049_6	chr18	+	178	1	Intergenic	novelGene_5295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	24103595	24103773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_24103600_24103800
Isoform_81050_4	chr18	+	177	1	Intergenic	novelGene_5296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTTTTTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	24113230	24113407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_24113200_24113400
Isoform_81052_3	chr18	-	179	1	Intergenic	novelGene_5297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATATGTGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	24139997	24139818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_24139800_24140000
Isoform_81054_283	chr18	+	177	1	Intergenic	novelGene_5298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAACAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	24183514	24183691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_24183500_24183700
Isoform_81060_129	chr4	-	177	1	Intergenic	novelGene_8306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155803379	155803202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155803200_155803400
Isoform_81061_3	chr18	+	209	1	Intergenic	novelGene_5299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATTTTATTAGTTTA	NA	False	NA	NA	False	NA	NA	NA	24458399	24458608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_24458400_24458600
Isoform_81063_9	chr18	+	317	1	NIC	ENSMUSG00000024273.9	novel	1146	5	NA	NA	0	-2105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	341	False	NA	NA	False	NA	NA	NA	24603907	24604224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_24603900_24604200
Isoform_81065_72	chr18	+	173	1	Intergenic	novelGene_5300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAACAAAACCT	NA	False	NA	NA	False	NA	NA	NA	24626764	24626937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_24626800_24626900
Isoform_81068_56	chr18	-	184	1	Intergenic	novelGene_5301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	24679182	24678998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_24679000_24679200
Isoform_81069_4	chr18	+	174	1	Intergenic	novelGene_5302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGACAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	24694066	24694240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_24694100_24694200
Isoform_8107_6	chr10	+	1403	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	3	407	3	-407	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCTCACAGTGAGATA	NA	False	NA	10	True	AATATA	-16	NA	105676930	105683287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
Isoform_81071_71	chr18	+	197	1	Intergenic	novelGene_5303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATCACATAAGAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	24702287	24702484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_24702300_24702500
Isoform_81074_10	chr18	+	172	1	Intergenic	novelGene_5304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAACCCAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	24858957	24859129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_24859000_24859100
Isoform_81075_5	chr18	+	176	1	Intergenic	novelGene_5305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATATCCGATAAG	6612	False	NA	NA	False	NA	NA	NA	24948073	24948249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_24948100_24948200
Isoform_81076_20	chr18	-	173	1	Intergenic	novelGene_5306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	25099386	25099213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_25099200_25099400
Isoform_81077_5	chr18	+	2680	1	Genic_Genomic	ENSMUSG00000024236.19	novel	NA	NA	NA	NA	-8	-79865	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAATCAAATTTT	-16	True	NA	NA	False	AAGAAA	-6	NA	4920531	4923211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_+_4920500_4923200
Isoform_81080_75	chr18	-	175	1	Intergenic	novelGene_5307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAACATGGA	NA	False	NA	NA	False	NA	NA	NA	27809213	27809038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_27809000_27809200
Isoform_81081_3	chr18	+	169	1	Intergenic	novelGene_5308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29420148	29420317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_29420100_29420300
Isoform_81082_20	chr18	+	174	1	Intergenic	novelGene_5309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAACTAA	NA	False	NA	NA	False	NA	NA	NA	30169805	30169979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_30169800_30170000
Isoform_81085_19	chr18	-	181	1	Intergenic	novelGene_5310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAGAAGTC	NA	False	NA	NA	False	NA	NA	NA	30428545	30428364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_30428400_30428500
Isoform_81087_8	chr18	-	178	1	Intergenic	novelGene_5311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	30723945	30723767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_30723800_30723900
Isoform_81088_13	chr18	+	216	1	Intergenic	novelGene_5312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTCTTTGGTTGGTGGTT	NA	False	NA	NA	False	NA	NA	NA	30829390	30829606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_30829400_30829600
Isoform_81089_39	chr18	+	177	1	Intergenic	novelGene_5313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCACAAAC	NA	False	NA	NA	False	NA	NA	NA	31509891	31510068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_31509900_31510100
Isoform_8109_10	chr10	+	3510	3	FSM	ENSMUSG00000019897.9	ENSMUST00000133538.2	4314	3	395	409	-42	-409	multi-exon	FALSE	canonical	3	411	junction_2	58.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGAGCTCACAGTGAGA	NA	False	NA	8	True	AATATA	-14	NA	105677322	105683285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_105677517_105678402_105681311_105682877
Isoform_81094_7	chr18	-	339	1	Intergenic	novelGene_5314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAAATAGCTGGCGGTG	NA	False	NA	NA	False	NA	NA	NA	31885508	31885169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_31885200_31885500
Isoform_81098_34	chr18	+	2210	1	NIC	ENSMUSG00000024400.17	novel	1756	2	NA	NA	0	-22545	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	5655	False	NA	NA	False	NA	NA	NA	31937150	31939360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_31937200_31939400
Isoform_81099_3	chr18	-	174	1	Intergenic	novelGene_5315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATTTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31958763	31958589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_31958600_31958800
Isoform_81100_12	chr18	-	178	1	Intergenic	novelGene_5316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAAACATGCT	NA	False	NA	NA	False	NA	NA	NA	32003481	32003303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_32003300_32003500
Isoform_81101_5	chr18	-	1202	1	Intergenic	novelGene_5317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32007817	32006615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_32006600_32007800
Isoform_81102_4	chr18	-	2767	1	Antisense	novelGene_ENSMUSG00000024400.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTTACCATGTACTGAG	NA	False	NA	NA	False	AATATA	-39	NA	32011608	32008841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_32008800_32011600
Isoform_81103_70	chr18	-	361	1	Intergenic	novelGene_5318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACATAAAAATAAAATTTTA	7698	False	NA	NA	False	NA	NA	NA	32029282	32028921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_32028900_32029300
Isoform_81106_15	chr18	-	2165	1	FSM	ENSMUSG00000044982.8	ENSMUST00000054984.8	2727	1	567	-5	567	5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATGGTCTCTGGATTC	NA	False	NA	NA	False	TATAAA	-23	NA	32044310	32042145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_32042100_32044300
Isoform_81111_14	chr18	-	844	1	Antisense	novelGene_ENSMUSG00000024384.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTCATGATCTTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	32201220	32200376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_-_32200400_32201200
Isoform_81113_10	chr18	-	182	1	Intergenic	novelGene_5319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTATCCAAATTATAC	NA	False	NA	NA	False	NA	NA	NA	32408326	32408144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_32408100_32408300
Isoform_81114_21	chr16	-	174	1	Intergenic	novelGene_4348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTACA	NA	False	NA	NA	False	NA	NA	NA	17406895	17406721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_17406700_17406900
Isoform_81119_3	chr18	-	1299	1	NIC	ENSMUSG00000024378.10	novel	5097	6	NA	NA	-18	-7874	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATTAAAAAAATAATAAGA	NA	False	NA	NA	False	NA	NA	NA	33346892	33345593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_33345600_33346900
Isoform_81121_24	chr18	-	175	1	Intergenic	novelGene_5320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATTTAAATTAC	NA	False	NA	NA	False	NA	NA	NA	33916466	33916291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_33916300_33916500
Isoform_81122_3	chr18	+	2572	1	FSM	ENSMUSG00000092819.3	ENSMUST00000175078.3	132	1	-261	-2179	-261	2179	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	33927955	33930527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_33928000_33930500
Isoform_81123_6	chr18	+	400	1	FSM	ENSMUSG00000092819.3	ENSMUST00000175078.3	132	1	-269	1	-269	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTACTCTAGCCTGTGT	NA	False	NA	9	True	NA	NA	NA	33927947	33928347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_33927900_33928300
Isoform_81125_6	chr18	+	172	1	Intergenic	novelGene_5321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAGAAACCCTAAGT	NA	False	NA	NA	False	NA	NA	NA	34104738	34104910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34104700_34104900
Isoform_81126_4	chr18	+	175	1	Intergenic	novelGene_5322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTAAGTTACATTTG	NA	False	NA	NA	False	NA	NA	NA	34128545	34128720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34128500_34128700
Isoform_81127_8	chr18	-	1199	1	Intergenic	novelGene_5323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTTGACTATGCAAG	NA	False	NA	NA	False	NA	NA	NA	34141905	34140706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_34140700_34141900
Isoform_81128_31	chr18	-	174	1	Intergenic	novelGene_5324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	34159320	34159146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_34159100_34159300
Isoform_81129_77	chr18	-	160	1	Intergenic	novelGene_5325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAAGTCTACTTTTGA	NA	False	NA	NA	False	NA	NA	NA	34188681	34188521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_34188500_34188700
Isoform_81131_3	chr18	+	333	1	Intergenic	novelGene_5326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	34205227	34205560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34205200_34205600
Isoform_81134_4	chr18	+	648	1	NIC	ENSMUSG00000005871.16	novel	3588	14	NA	NA	1	-42123	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	34353977	34354625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_34354000_34354600
Isoform_81135_6	chr18	-	1400	1	Intergenic	novelGene_5327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34376315	34374915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_34374900_34376300
Isoform_81137_9	chr18	+	168	1	Intergenic	novelGene_5328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34438140	34438308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34438100_34438300
Isoform_81146_98	chr18	+	163	1	Intergenic	novelGene_5329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATATAATAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	34459112	34459275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34459100_34459300
Isoform_81150_8	chr18	+	178	1	Intergenic	novelGene_5330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	34488955	34489133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34489000_34489100
Isoform_81154_26	chr18	+	176	1	Intergenic	novelGene_5331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTTGTT	NA	False	NA	NA	False	NA	NA	NA	34603869	34604045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34603900_34604000
Isoform_81156_4	chr18	+	3410	1	Antisense	novelGene_ENSMUSG00000036501.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34621160	34624570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_34621200_34624600
Isoform_81158_18	chr18	-	716	1	Genic_Genomic	ENSMUSG00000036501.8	novel	NA	NA	NA	NA	-31	-11274	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	34639915	34639199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_-_34639200_34639900
Isoform_81159_7	chr18	+	168	1	Intergenic	novelGene_5332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTATGTATTGC	NA	False	NA	NA	False	NA	NA	NA	34672349	34672517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34672300_34672500
Isoform_81163_3	chr18	+	169	1	Intergenic	novelGene_5333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAC	NA	False	NA	NA	False	NA	NA	NA	34738006	34738175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34738000_34738200
Isoform_81164_27	chr18	-	2663	1	NIC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-20	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-16	NA	34757627	34754964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_34755000_34757600
Isoform_81167_4	chr18	-	157	1	Intergenic	novelGene_5334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	34807243	34807086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_34807100_34807200
Isoform_81169_6	chr18	+	164	1	Intergenic	novelGene_5335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAATAAACAAA	75	False	NA	NA	False	NA	NA	NA	34855656	34855820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_34855700_34855800
Isoform_81170_14	chr18	-	174	1	Intergenic	novelGene_5336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAATGGCATT	1274	False	NA	NA	False	NA	NA	NA	34861516	34861342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_34861300_34861500
Isoform_81171_23	chr18	-	173	1	Intergenic	novelGene_5337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATGGCATTCCGGGC	1084	False	NA	NA	False	NA	NA	NA	34861706	34861533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_34861500_34861700
Isoform_81172_152	chr18	+	180	1	Intergenic	novelGene_5246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5951487	5951667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_5951500_5951700
Isoform_81174_4	chr18	+	2969	1	FSM	ENSMUSG00000078240.3	ENSMUST00000105038.3	1656	1	-1279	-34	-1279	34	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGATACAAAGGAAAC	3472	False	NA	NA	False	NA	NA	NA	34868132	34871101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_34868100_34871100
Isoform_81179_3	chr18	+	2416	2	NNC	ENSMUSG00000034300.18	novel	4200	4	NA	NA	11723	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGCAACCTTGTGTACG	NA	False	NA	17	True	AATAAA	-24	NA	34904348	34906804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr18_+_34904383_34904422
Isoform_81182_44	chr18	-	172	1	Intergenic	novelGene_5338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	34957153	34956981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_34957000_34957200
Isoform_81185_9	chr18	-	176	1	Intergenic	novelGene_5340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	35031655	35031479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35031500_35031700
Isoform_81207_3	chr18	+	5019	1	Intergenic	novelGene_5341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGGTATAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	35087722	35092741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35087700_35092700
Isoform_81211_58	chr18	+	178	1	Intergenic	novelGene_5342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	35106738	35106916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35106700_35106900
Isoform_81212_18	chr18	-	173	1	Intergenic	novelGene_5343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGGAAA	8086	False	NA	NA	False	NA	NA	NA	35110722	35110549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35110500_35110700
Isoform_81213_35	chr18	-	208	1	Intergenic	novelGene_5344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35183041	35182833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35182800_35183000
Isoform_81214_6	chr18	+	160	1	Intergenic	novelGene_5345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCTTAAAACAG	NA	False	NA	NA	False	NA	NA	NA	35186444	35186604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35186400_35186600
Isoform_81215_5	chr18	-	173	1	Intergenic	novelGene_5346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	7990	False	NA	NA	False	NA	NA	NA	35207065	35206892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35206900_35207100
Isoform_81216_3	chr18	+	178	1	Intergenic	novelGene_5347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAAAGTTGCCGT	NA	False	NA	NA	False	NA	NA	NA	35209533	35209711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35209500_35209700
Isoform_81217_5	chr18	-	174	1	Intergenic	novelGene_5348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	771	False	NA	NA	False	NA	NA	NA	35214284	35214110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35214100_35214300
Isoform_81218_9	chr18	-	2175	1	Intergenic	novelGene_5349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3522	False	NA	NA	False	GGGGCT	-27	NA	35255461	35253286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35253300_35255500
Isoform_81219_8	chr18	-	1850	1	Intergenic	novelGene_5350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-26	NA	35265549	35263699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35263700_35265500
Isoform_81221_5	chr18	-	234	1	Intergenic	novelGene_5351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAATTTTAAATGAAGA	NA	False	NA	NA	False	AAAAAG	-33	NA	35322658	35322424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35322400_35322700
Isoform_81222_5	chr18	-	11532	1	FSM	ENSMUSG00000071862.4	ENSMUST00000236530.2	2872	1	-1205	-7455	-1189	4321	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACACAATTTCAATAAT	NA	False	NA	NA	False	NA	NA	NA	35349266	35337734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_-_35337700_35349300
Isoform_81223_3	chr18	-	386	1	Intergenic	novelGene_5352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGAGAAGGCAGAGGAG	NA	False	NA	NA	False	NA	NA	NA	35354264	35353878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35353900_35354300
Isoform_81231_5	chr18	+	161	1	Intergenic	novelGene_5353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35490148	35490309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35490100_35490300
Isoform_81232_6	chr18	+	1743	1	Intergenic	novelGene_5354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTATAAGTCCTACGGAG	4738	False	NA	NA	False	NA	NA	NA	35499994	35501737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35500000_35501700
Isoform_81234_8	chr18	+	206	1	Intergenic	novelGene_5355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATATATATATGGT	84	False	NA	NA	False	NA	NA	NA	35599328	35599534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35599300_35599500
Isoform_81237_9	chr18	+	171	1	Intergenic	novelGene_5356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGACTGAAGCGAGCAG	NA	False	NA	NA	False	NA	NA	NA	35652961	35653132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35653000_35653100
Isoform_81238_9	chr18	+	312	1	Intergenic	novelGene_5357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	35652962	35653274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35653000_35653300
Isoform_81239_5	chr18	+	171	1	Intergenic	novelGene_5358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATATTTCCTCCTATT	NA	False	NA	NA	False	NA	NA	NA	35678603	35678774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35678600_35678800
Isoform_81240_6	chr18	-	168	1	Intergenic	novelGene_5359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	35681359	35681191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35681200_35681400
Isoform_81245_6	chr18	-	166	1	Intergenic	novelGene_5360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	35728810	35728644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35728600_35728800
Isoform_81249_46	chr18	-	176	1	Intergenic	novelGene_5361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGCCACA	NA	False	NA	NA	False	NA	NA	NA	35772907	35772731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35772700_35772900
Isoform_81250_6	chr18	-	183	1	Intergenic	novelGene_5362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	35777272	35777089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35777100_35777300
Isoform_81252_11	chr18	-	177	1	Intergenic	novelGene_5364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	35779686	35779509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35779500_35779700
Isoform_81253_4	chr18	-	678	1	NIC	ENSMUSG00000117874.2	novel	1115	7	NA	NA	28	-14190	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	35795188	35794510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_-_35794500_35795200
Isoform_81255_32	chr18	-	176	1	Intergenic	novelGene_5365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTCTGTGC	8332	False	NA	NA	False	NA	NA	NA	35821799	35821623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35821600_35821800
Isoform_81257_14	chr18	-	179	1	Intergenic	novelGene_5366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	35865282	35865103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35865100_35865300
Isoform_81258_4	chr18	+	168	1	Intergenic	novelGene_5367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	637	False	NA	NA	False	NA	NA	NA	35890323	35890491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35890300_35890500
Isoform_81259_6	chr18	+	204	1	Intergenic	novelGene_5368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAATCCGCACTCAAGA	1415	False	NA	NA	False	NA	NA	NA	35891101	35891305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_35891100_35891300
Isoform_81261_1324	chr18	-	173	1	Intergenic	novelGene_5369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35897490	35897317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35897300_35897500
Isoform_81262_5	chr18	-	1893	1	Intergenic	novelGene_5370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGAAGTTGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	35915713	35913820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35913800_35915700
Isoform_81265_11	chr18	+	5580	1	Intergenic	novelGene_5247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTCAAAATGAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	6118537	6124117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_6118500_6124100
Isoform_81266_23	chr18	-	176	1	Intergenic	novelGene_5371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACTAGAT	NA	False	NA	NA	False	NA	NA	NA	35943587	35943411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35943400_35943600
Isoform_81267_235	chr18	-	156	1	Intergenic	novelGene_5372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGAGGTAATCTTT	NA	False	NA	-21	True	NA	NA	NA	35955662	35955506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_35955500_35955700
Isoform_81268_42	chr18	-	2404	1	Genic_Genomic	ENSMUSG00000100320.2	novel	NA	NA	NA	NA	-2281	-582	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35966427	35964023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr18_-_35964000_35966400
Isoform_8127_75	chr10	+	5742	25	FSM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-93	-2294	-93	-339	multi-exon	TRUE	canonical	3	168	junction_12	28.3996466625125	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGAGCTAGTTTTTTT	NA	False	NA	6	True	CATAAA	-17	NA	107997960	108115506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108103264_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
Isoform_81278_14	chr18	+	181	1	Intergenic	novelGene_5373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTGATTGACTTTTATG	2790	False	NA	NA	False	NA	NA	NA	36016112	36016293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_36016100_36016300
Isoform_81282_5	chr18	+	179	1	Intergenic	novelGene_5374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGTAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	36047807	36047986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_36047800_36048000
Isoform_81284_107	chr2	-	228	1	Intergenic	novelGene_6715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTCATGTG	NA	False	NA	NA	False	NA	NA	NA	157613593	157613365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_157613400_157613600
Isoform_81285_9	chr18	+	369	1	Intergenic	novelGene_5375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGAGATGTGA	NA	False	NA	NA	False	NA	NA	NA	36068648	36069017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_36068600_36069000
Isoform_81286_9	chr18	-	176	1	Intergenic	novelGene_5376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGATAAAAAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	36082914	36082738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36082700_36082900
Isoform_81290_8	chr18	-	178	1	Intergenic	novelGene_5377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	36382880	36382702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36382700_36382900
Isoform_81292_674	chr18	-	181	1	Intergenic	novelGene_5378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	674	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAACTAAGCA	NA	False	NA	NA	False	NA	NA	NA	36396917	36396736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36396700_36396900
Isoform_81293_10	chr18	-	187	1	Intergenic	novelGene_5379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATCTGTTTATTGTAGC	NA	False	NA	NA	False	NA	NA	NA	36401139	36400952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36401000_36401100
Isoform_81299_7	chr18	+	5591	1	NIC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5837	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTTGTACTCACTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	36419986	36425577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr18_+_36420000_36425600
Isoform_81308_17	chr18	+	5433	1	ISM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	5996	10	5996	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTGTACTCACTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	36420145	36425578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr18_+_36420100_36425600
Isoform_81313_3	chr18	+	2798	1	FSM	ENSMUSG00000110185.3	ENSMUST00000210490.3	2839	1	3	38	3	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAGATGTTTATTT	NA	False	NA	NA	False	AATAAA	-8	NA	36431734	36434532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr18_+_36431700_36434500
Isoform_81314_6	chr18	-	230	1	Intergenic	novelGene_5380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGTACCTCTTCACCT	NA	False	NA	NA	False	AATAAA	-10	NA	36466742	36466512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36466500_36466700
Isoform_81315_89	chr18	-	159	1	Intergenic	novelGene_5381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	36471792	36471633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36471600_36471800
Isoform_81316_9	chr18	-	175	1	Intergenic	novelGene_5382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCCACAAGAA	NA	False	NA	NA	False	NA	NA	NA	36492999	36492824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_-_36492800_36493000
Isoform_81319_6	chr18	+	193	1	Intergenic	novelGene_5248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTAGGCTGTAAGTTCCC	NA	False	NA	NA	False	NA	NA	NA	6221562	6221755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_6221600_6221800
Isoform_81320_17	chr10	+	175	1	Intergenic	novelGene_761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATAGATCTGGC	NA	False	NA	NA	False	NA	NA	NA	22545632	22545807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_22545600_22545800
Isoform_81324_85	chr19	-	3634	15	FSM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	85	1850	47	-2	multi-exon	FALSE	canonical	3	43	junction_2	8.84936294259626	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGCTTGTGTTGGAG	NA	False	NA	-2	True	ATTAAA	-15	NA	3332932	3310925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
Isoform_81325_55	chr19	-	3692	15	FSM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	27	1850	-10	-2	multi-exon	FALSE	canonical	3	43	junction_2	8.84936294259626	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGCTTGTGTTGGAG	NA	False	NA	-2	True	ATTAAA	-15	NA	3332990	3310925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
Isoform_81343_44	chr19	-	4870	24	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	100.351876189837	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTCGTGAGCCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	3625715	3504929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
Isoform_81345_12	chr19	-	4782	23	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	104.980212618009	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625715	3504930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
Isoform_81359_31	chr19	-	4914	24	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	106.049298376747	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCCTCGTGAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	3625715	3504931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576930_3594107_3594256_3625640
Isoform_81364_129	chr19	-	4955	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	0	-3	0	-2	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTCGTGAGCCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	3625749	3504929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
Isoform_81366_158	chr19	-	4773	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	145	junction_22	86.8173369782787	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTCGTGAGCCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	3625715	3504929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
Isoform_8137_10	chr10	+	6067	25	FSM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-79	-2633	-79	0	multi-exon	FALSE	canonical	3	168	junction_12	28.3996466625125	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGCACTTTGTGTAT	NA	False	NA	NA	False	AGTAAA	-19	NA	107997974	108115845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108103264_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
Isoform_81375_154	chr19	-	4834	23	FSM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	5	2	1	-2	multi-exon	FALSE	canonical	3	106	junction_9	88.0225482945391	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTCGTGAGCCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	3625715	3504929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
Isoform_81377_68	chr19	-	4684	22	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	106	junction_9	104.600590087781	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCCTCGTGAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	3625715	3504931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
Isoform_81385_137	chr19	-	5153	23	FSM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	1	7	1	1	multi-exon	FALSE	canonical	2	72	junction_10	15.3130555220533	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACCTGCCATTCCTT	7828	False	NA	-7	True	TATAAA	-13	NA	3736555	3634834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
Isoform_81388_28	chr19	-	5202	23	FSM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	-41	0	-33	0	multi-exon	TRUE	canonical	2	72	junction_10	15.3130555220533	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCATTCCTTTGTGCCT	7786	False	NA	0	True	TATAAA	-20	NA	3736597	3634827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
Isoform_81389_4	chr19	-	3077	20	FSM	ENSMUSG00000001750.17	ENSMUST00000126070.9	3041	20	-38	2	11	-2	multi-exon	FALSE	canonical	0	0	junction_19	15.1306407031772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTCTCTGTCCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	3957029	3946051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3956523
Isoform_81390_176	chr19	-	2607	20	FSM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	80	1	-13	-1	multi-exon	FALSE	canonical	3	39	junction_12	8.58007741992203	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTCTGTCCTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	3957053	3946050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
Isoform_81391_6	chr19	-	2797	19	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	39	junction_12	8.62740394124629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTCTGTCCTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	3957076	3946050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
Isoform_81392_6	chr19	-	2915	19	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	39	junction_11	8.71496513383448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTCTGTCCTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	3957053	3946050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
Isoform_81393_15	chr19	-	3122	18	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	19	-1	intron_retention	FALSE	canonical	3	39	junction_11	8.75502821418308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTCTGTCCTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	3957093	3946050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
Isoform_81401_143	chr19	-	966	7	FSM	ENSMUSG00000059734.8	ENSMUST00000075092.8	983	7	17	0	17	0	multi-exon	FALSE	canonical	3	209	junction_6	645.480290601933	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962717	3958866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962466
Isoform_81405_1178	chr19	-	756	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	24	0	-16	0	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962750	3958866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
Isoform_81406_239	chr19	-	780	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962774	3958866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
Isoform_81409_12	chr19	-	1809	10	FSM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	67	48	-14	-48	multi-exon	FALSE	canonical	2	3	junction_9	3.58322566591047	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCCTATCGTCGTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	3979741	3963538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3979695
Isoform_81410_23	chr19	-	1907	10	NNC	ENSMUSG00000024885.10	novel	1924	10	NA	NA	-1051	-48	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	2.58198889747161	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCCTATCGTCGTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	3980859	3963538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3980715
Isoform_81420_2213	chr19	-	1517	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	141	3	0	2	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTGGAACTTTGCTT	6567	False	NA	0	True	AATAAA	-27	NA	4062665	4057499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
Isoform_81421_688	chr19	-	1574	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	82	5	-16	0	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTCTGGAACTTTGC	6508	False	NA	-2	True	AATAAA	-25	NA	4062724	4057501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
Isoform_81446_1367	chr19	-	760	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	60	1	0	1	multi-exon	FALSE	canonical	3	1999	junction_6	828.939215034626	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	4087925	4085407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
Isoform_81447_206	chr19	-	784	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	36	1	-24	1	multi-exon	FALSE	canonical	3	1999	junction_6	828.939215034626	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	4087949	4085407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
Isoform_81449_54	chr19	-	757	7	FSM	ENSMUSG00000060803.7	ENSMUST00000237893.2	806	7	52	-3	0	1	multi-exon	FALSE	canonical	0	0	junction_6	1359.76024234667	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	4087925	4085407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087865
Isoform_81454_38	chr19	-	990	6	ISM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	31	2	-14	0	intron_retention	FALSE	canonical	3	1402	junction_5	871.235766024329	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4092232	4090286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902
Isoform_81455_1273	chr19	-	768	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	26	3	-19	-1	multi-exon	FALSE	canonical	3	1174	junction_6	961.706469424706	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGGTGTCTTTGGTGCC	NA	False	NA	NA	False	AATAAA	-13	NA	4092237	4090287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
Isoform_81457_19	chr19	-	891	8	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	1378.94109033426	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCCGT	NA	False	NA	NA	False	AATAAA	-15	NA	4096012	4090285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092566_4092672_4095923
Isoform_8146_7	chr10	+	5556	24	NIC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-77	-341	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	49.5296210851579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGAGAGCTAGTTTTT	NA	False	NA	4	True	CATAAA	-15	NA	107997976	108115504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108103264_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
Isoform_81461_20	chr19	-	932	6	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	1174	junction_5	1038.62948157656	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCCGT	NA	False	NA	NA	False	AATAAA	-15	NA	4092233	4090285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4090540_4090707_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
Isoform_81462_24	chr19	-	949	5	ISM	ENSMUSG00000058216.14	ENSMUST00000076451.7	685	6	159	-6	159	5	3prime_fragment	FALSE	canonical	3	57	junction_3	9.36416040016402	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGCTTGTCCTTAATC	9383	False	NA	NA	False	NA	NA	NA	4109136	4107471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734
Isoform_81465_3	chr19	-	724	7	FSM	ENSMUSG00000058216.14	ENSMUST00000189808.7	708	7	-12	-4	3	4	multi-exon	FALSE	canonical	2	4	junction_6	28.8236978119664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGGGCTTGTCCTTAAT	9061	False	NA	NA	False	NA	NA	NA	4109458	4107472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734_4108842_4109258_4109295_4109423
Isoform_81466_3	chr19	-	690	6	NIC	ENSMUSG00000058216.14	novel	685	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	25.7029181222678	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGCAGGGCTTGTCC	9054	False	NA	NA	False	NA	NA	NA	4109465	4107477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734_4108842_4109423
Isoform_81467_3	chr19	-	1155	6	NIC	ENSMUSG00000058216.14	novel	708	7	NA	NA	-14	1	intron_retention	FALSE	canonical	2	4	junction_5	26.460536653666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGCAGGGCTTGTCCTT	9044	False	NA	NA	False	NA	NA	NA	4109475	4107475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734_4109295_4109423
Isoform_81469_238	chr19	-	1255	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	28	-22	28	4	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAAGGCTGGTCATCAC	3930	False	NA	1	True	TATAAA	-39	NA	4171547	4164441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
Isoform_8147_14	chr10	+	5303	24	NIC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-79	-596	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	49.5296210851579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTGTGAACTTTT	NA	False	NA	4	True	AATAAA	-40	NA	107997974	108115249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108103264_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
Isoform_81471_18	chr19	-	1962	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	6	-707	6	689	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCCCTCACTCTTCACT	3908	False	NA	NA	False	AATAAA	-18	NA	4171569	4163756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
Isoform_81473_5	chr19	-	1298	7	FSM	ENSMUSG00000024847.16	ENSMUST00000117831.8	1378	7	63	17	-5	1	multi-exon	FALSE	canonical	2	3	junction_6	105.801307490346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTGCAGAACTAATCT	9679	False	NA	-20	True	TATAAA	-18	NA	4175795	4164462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335_4171546_4175729
Isoform_81474_85	chr19	-	1723	15	FSM	ENSMUSG00000024830.18	ENSMUST00000025749.15	4586	15	59	2804	1	0	multi-exon	FALSE	canonical	2	38	junction_6	17.8245416691225	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2808	False	NA	-2	True	AGTAAA	-14	NA	4213294	4206793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
Isoform_81475_12	chr19	-	2006	15	FSM	ENSMUSG00000024830.18	ENSMUST00000130469.8	1979	15	-26	-1	4	1	multi-exon	FALSE	canonical	1	2	junction_9	32.5877935079116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTGGCTTTTGCCGGAC	2777	False	NA	-1	True	AGTAAA	-15	NA	4213325	4206792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4209564_4209705_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
Isoform_81476_24	chr19	-	1868	14	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	79	junction_5	10.8698595277881	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2774	False	NA	-2	True	AGTAAA	-14	NA	4213328	4206793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
Isoform_81477_3	chr19	-	2416	14	NIC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	5	549	intron_retention	FALSE	canonical	3	79	junction_5	10.8698595277881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGGCGGCCCTGATTC	2778	False	NA	NA	False	NA	NA	NA	4213324	4206241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
Isoform_81478_9	chr19	-	2317	13	NIC	ENSMUSG00000024830.18	novel	2090	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	84	junction_12	10.3772587902586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2806	False	NA	-2	True	AGTAAA	-14	NA	4213296	4206793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
Isoform_81484_574	chr19	-	2080	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	0	1	0	-1	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTGTGTGTTCCCCGTGA	5998	False	NA	-1	True	AATAAA	-14	NA	4251635	4245195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
Isoform_81486_14	chr19	-	1358	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	-37	760	-11	-736	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGGACCAGAAGCAGGCC	5961	False	NA	NA	False	ATTAAA	-17	NA	4251672	4245954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
Isoform_81490_9	chr19	-	2170	10	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	334	junction_4	41.9817714705141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTGTGTGTTCCCCGTGA	5992	False	NA	-1	True	AATAAA	-14	NA	4251641	4245195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
Isoform_81491_25	chr19	-	2158	10	FSM	ENSMUSG00000024824.8	ENSMUST00000237467.2	2101	10	-33	-24	-4	0	multi-exon	FALSE	canonical	3	364	junction_3	31.4889751429854	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5994	False	NA	0	True	AATAAA	-15	NA	4251639	4245194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
Isoform_81493_11	chr19	-	2016	10	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	14	junction_3	132.963189930684	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTGTGTGTTCCCCGTGA	5997	False	NA	-1	True	AATAAA	-14	NA	4251636	4245195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
Isoform_81495_8	chr19	-	2790	14	FSM	ENSMUSG00000034616.18	ENSMUST00000113852.6	2705	14	-85	0	-85	0	multi-exon	FALSE	canonical	1	1	junction_12	2.03228381748045	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGACATTTTCCATTT	2265	False	NA	-25	True	AATAAA	-14	NA	4319293	4311723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4312661_4313574_4313846_4313935_4314137_4314341_4314489_4315130_4315178_4315319_4315449_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4317774_4318007_4318572_4318611_4319042
Isoform_81496_8	chr19	-	2639	14	FSM	ENSMUSG00000034616.18	ENSMUST00000113852.6	2705	14	69	-3	-11	3	multi-exon	TRUE	canonical	1	1	junction_12	2.03228381748045	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATTTTCCATTTGTG	2419	False	NA	-22	True	AATAAA	-17	NA	4319139	4311720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4312661_4313574_4313846_4313935_4314137_4314341_4314489_4315130_4315178_4315319_4315449_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4317774_4318007_4318572_4318611_4319042
Isoform_81499_50	chr19	-	2102	15	FSM	ENSMUSG00000005986.17	ENSMUST00000056888.13	2139	15	37	0	37	0	multi-exon	FALSE	canonical	2	3	junction_3	4.70128076340124	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGCTGTCCTGCGTGGT	897	False	NA	-5	True	AATAAA	-17	NA	4333126	4320207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
Isoform_81514_30	chr19	-	2503	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	-164	1037	-164	-420	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTATTATTTGTTTTC	NA	False	NA	-31	True	TATAAA	-20	NA	4356414	4337066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
Isoform_81515_162	chr19	-	3444	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	-68	0	-68	0	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	-9	True	TATAAA	-13	NA	4356318	4336029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
Isoform_81518_28	chr19	-	3541	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	-164	-1	-164	0	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGCTGTCTCAGACTC	NA	False	NA	-8	True	TATAAA	-14	NA	4356414	4336028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
Isoform_81523_6	chr19	-	4948	10	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-21	-369	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	36.3402983470227	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTTAAAGGGTTTGG	4150	False	NA	NA	False	AATAAA	-17	NA	4384050	4366566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
Isoform_81528_8	chr19	-	7181	21	FSM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	1	60	1	-60	multi-exon	FALSE	canonical	3	58	junction_20	26.1194850638369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATAGCCTCCAATGG	NA	False	NA	-53	True	AATAAA	-18	NA	4447104	4366257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
Isoform_81530_18	chr19	-	7165	21	FSM	ENSMUSG00000054611.18	ENSMUST00000047898.14	8578	21	-312	1725	-312	26	multi-exon	FALSE	canonical	3	19	junction_20	31.2315545562497	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4448625	4366171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
Isoform_81534_12	chr19	-	3208	12	ISM	ENSMUSG00000054611.18	ENSMUST00000116571.9	2413	13	5	592	2	-592	5prime_fragment	FALSE	canonical	3	58	junction_11	21.4707180955177	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGTGGATTGATTGG	NA	False	NA	NA	False	NA	NA	NA	4447103	4391969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
Isoform_81535_24	chr19	-	1141	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	-5	208	-5	0	multi-exon	FALSE	canonical	3	9	junction_1	4.02336923485777	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	9143	False	NA	-4	True	ACTAAA	-15	NA	4489465	4475694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
Isoform_81536_3	chr19	-	1536	4	FSM	ENSMUSG00000041845.12	ENSMUST00000117462.2	1495	4	-41	0	-30	0	multi-exon	FALSE	canonical	3	13	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	9118	False	NA	-4	True	ACTAAA	-15	NA	4489490	4475694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4476790_4482082_4482193_4482795_4482884_4489247
Isoform_81537_10	chr19	-	1908	8	FSM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	280	1393	-11	416	multi-exon	FALSE	canonical	1	2	junction_3	1.55182578445717	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTGGTGGCAAGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	4527195	4497328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792_4504009_4506522_4506916_4510644_4510839_4517934_4517992_4526962
Isoform_81538_26	chr19	-	3388	2	FSM	ENSMUSG00000045045.8	ENSMUST00000053597.3	3194	2	-186	-8	-21	1	multi-exon	FALSE	canonical	3	59	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTTTTTCGTCTCAT	NA	False	NA	1	True	AATAAA	-19	NA	4665716	4661811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4662667_4663183
Isoform_81542_10	chr19	-	3498	2	FSM	ENSMUSG00000045045.8	ENSMUST00000053597.3	3194	2	-296	-8	-131	1	multi-exon	FALSE	canonical	3	59	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTTTTTCGTCTCAT	NA	False	NA	1	True	AATAAA	-19	NA	4665826	4661811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4662667_4663183
Isoform_81544_27	chr19	-	2931	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	-21	8	-21	-1	multi-exon	FALSE	canonical	3	22	junction_2	18.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTTCAGTGTTGGTTTT	NA	False	NA	-8	True	AATAAA	-10	NA	4665716	4661820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4662667_4663183_4664543_4664990
Isoform_81547_14	chr19	-	3096	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	-177	-1	-177	1	multi-exon	FALSE	canonical	3	22	junction_2	18.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTTTTTCGTCTCAT	NA	False	NA	1	True	AATAAA	-19	NA	4665872	4661811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4662667_4663183_4664543_4664990
Isoform_81549_6	chr19	-	3183	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	-269	4	-269	3	multi-exon	FALSE	canonical	3	22	junction_2	18.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTTGGTTTTTCGT	NA	False	NA	-4	True	AATAAA	-14	NA	4665964	4661816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4662667_4663183_4664543_4664990
Isoform_8155_265	chr10	+	2413	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	-78	-590	-78	590	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTTGGTATTTAGGG	5520	False	NA	13	True	AATAAA	-15	NA	108167903	108250691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
Isoform_81552_5	chr19	-	1407	8	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	1	9	junction_4	123.357618495237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGGTCTTGGAACCTT	NA	False	NA	-14	True	ATTAAA	-16	NA	4675681	4672623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674180_4674712_4674792_4675040_4675125_4675220_4675324_4675460
Isoform_81554_12	chr19	-	1426	8	NIC	ENSMUSG00000024889.6	novel	1455	8	NA	NA	-16	-1	combination_of_known_junctions	TRUE	canonical	3	51	junction_4	128.932983699728	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTCTTGGAACCTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	4675647	4672621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675121_4675220_4675324_4675460
Isoform_81556_47	chr19	-	1443	8	FSM	ENSMUSG00000024889.6	ENSMUST00000225476.2	1455	8	9	3	8	-1	multi-exon	FALSE	canonical	3	51	junction_4	109.573011722592	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTCTTGGAACCTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	4675660	4672621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675125_4675220_4675324_4675460
Isoform_8156_1215	chr10	+	2314	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	21	-590	21	590	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTTGGTATTTAGGG	5619	False	NA	13	True	AATAAA	-15	NA	108168002	108250691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
Isoform_81560_83	chr19	-	1405	8	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	3	108	junction_6	91.2554163894295	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTCTTGGAACCTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	4675651	4672621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675121_4675220_4675324_4675460
Isoform_81562_236	chr19	-	1409	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	17	-1	17	-1	multi-exon	FALSE	canonical	3	266	junction_6	48.136286113662	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTCTTGGAACCTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	4675651	4672621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
Isoform_81564_6	chr19	-	1911	7	NIC	ENSMUSG00000024889.6	novel	1455	8	NA	NA	16	-1	intron_retention	FALSE	canonical	3	266	junction_5	43.5446769294352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGGTCTTGGAACCTT	NA	False	NA	-14	True	ATTAAA	-16	NA	4675652	4672623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674792_4675040_4675125_4675220_4675324_4675460
Isoform_81566_11	chr19	-	1442	8	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	121.7077463032	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAACCTTGGGACTCT	NA	False	NA	-6	True	ATTAAA	-24	NA	4675665	4672615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4673271_4673528_4673605_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
Isoform_8157_52	chr10	+	2457	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	-109	-603	-109	603	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGGGTTGTTTTGTGTCG	5489	False	NA	26	True	AATAAA	-28	NA	108167872	108250704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
Isoform_81570_35	chr19	-	1723	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	22	865	1	-1	multi-exon	FALSE	canonical	3	26	junction_3	29.8923996285938	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGGTATGTGTGCTTT	NA	False	NA	-9	True	AATAAA	-11	NA	4843907	4835185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
Isoform_81571_4	chr19	-	2593	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	22	-5	1	5	multi-exon	TRUE	canonical	3	26	junction_3	29.8923996285938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTGGGTGACTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	4843907	4834315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
Isoform_81572_9	chr19	-	1628	4	FSM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	-61	-156	-20	2	multi-exon	FALSE	canonical	3	70	junction_3	11.4406682011537	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTGCTTTGAGAAAG	NA	False	NA	-2	True	AATAAA	-18	NA	4843949	4835178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843
Isoform_81581_4	chr19	-	1868	2	FSM	ENSMUSG00000094936.9	ENSMUST00000179820.2	2965	2	3	1094	0	-1094	multi-exon	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	4843908	4841189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4842849_4843699
Isoform_81599_1914	chr19	-	2773	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	35	357	-14	-4	multi-exon	FALSE	canonical	3	363	junction_1	19	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTGGTTGTCATTGTC	7800	False	NA	-4	True	AATAAA	-23	NA	4861627	4850953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4851834_4852578_4854044_4861199
Isoform_81601_52	chr19	-	3131	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	35	-1	-14	1	multi-exon	FALSE	canonical	3	363	junction_1	19	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGATGGTTCTGGCTG	7800	False	NA	NA	False	AATAAA	-18	NA	4861627	4850595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4851834_4852578_4854044_4861199
Isoform_81616_10	chr19	-	929	8	NIC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	206.828727330078	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889293	4875393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884200_4884339_4888858_4888932_4889224
Isoform_81617_5	chr19	-	893	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236178.2	870	8	-25	2	-11	-2	multi-exon	FALSE	canonical	3	24	junction_5	202.991002112841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGTGTCTCTGTGTTC	NA	False	NA	-9	True	ATTAAA	-18	NA	4889326	4875395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884267_4884339_4888858_4888932_4889224
Isoform_81619_241	chr19	-	1004	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	62	1	0	-1	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTCTCTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-19	NA	4889298	4875394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
Isoform_81620_191	chr19	-	1033	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	34	0	-11	0	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889326	4875393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
Isoform_81621_5	chr19	-	1123	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	-56	0	-56	0	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889416	4875393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
Isoform_81622_19	chr19	-	984	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236451.2	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	206.828727330078	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889298	4875393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884221_4884339_4888858_4888932_4889224
Isoform_81626_20	chr19	-	2566	18	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	5933	6	5933	1	3prime_fragment	FALSE	canonical	2	12	junction_7	4.36643377879897	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGTTTTGTTTTT	6246	False	NA	-2	True	AATAAA	-24	NA	4922004	4911249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798
Isoform_81627_4	chr19	-	2743	19	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	5378	3	5378	-3	3prime_fragment	FALSE	canonical	2	12	junction_7	4.67723670663315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTGTTTTTGTT	5691	False	NA	1	True	AATAAA	-27	NA	4922559	4911246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266
Isoform_81628_42	chr19	-	2862	21	FSM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	18	7	18	0	multi-exon	FALSE	canonical	2	4	junction_20	6.25519783859791	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTTTTGTTTTGTTTT	331	False	NA	-3	True	AATAAA	-23	NA	4927919	4911250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266_4922387_4922569_4922685_4927738
Isoform_81629_5	chr19	-	3030	21	FSM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	-149	6	-149	1	multi-exon	FALSE	canonical	2	4	junction_20	6.25519783859791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGTTTTGTTTTT	164	False	NA	-2	True	AATAAA	-24	NA	4928086	4911249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266_4922387_4922569_4922685_4927738
Isoform_81631_14	chr19	-	5579	18	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.83570915636814	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTATTTTGTGTGT	5075	False	NA	NA	False	ATTAAA	-17	NA	4956654	4936906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_4938514_4938533_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
Isoform_81651_51	chr19	-	2640	18	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_17	191.571230439698	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978002	4957258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4977975
Isoform_81653_2235	chr19	-	2645	18	FSM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	36	2	-4	0	multi-exon	FALSE	canonical	3	495	junction_17	96.7659038009169	2235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978279	4957258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
Isoform_81656_32	chr19	-	2675	19	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	254.515662037176	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978275	4957258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973316_4973351_4973711_4973802_4976812_4977088_4978247
Isoform_81661_5	chr19	-	4047	7	FSM	ENSMUSG00000024901.16	ENSMUST00000025834.15	4110	7	60	3	0	-3	multi-exon	FALSE	canonical	1	2	junction_1	5.01386965216377	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCGCTGGTAAAGGACT	8766	False	NA	NA	False	NA	NA	NA	4993095	4979747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986248_4988076_4988207_4991787_4991941_4992965
Isoform_81662_23	chr19	-	2606	2	FSM	ENSMUSG00000061451.14	ENSMUST00000077066.8	4006	2	-3	1403	-3	-1403	multi-exon	FALSE	canonical	2	12	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGTTTCACACGTGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	5135562	5130760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5133130_5135325
Isoform_81668_1366	chr19	-	1835	6	FSM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	77	1	10	-1	multi-exon	FALSE	canonical	3	994	junction_1	78.6628247649422	1366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGTGGTGACTGAGTGTG	1578	False	NA	-1	True	AATAAA	-42	NA	5157023	5149233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
Isoform_81675_128	chr19	-	2905	16	FSM	ENSMUSG00000024862.17	ENSMUST00000116563.8	3169	16	263	1	0	-1	multi-exon	FALSE	canonical	3	42	junction_15	16.0036107036992	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCTTGTTTTGAGGAG	NA	False	NA	-2	True	AATAAA	-17	NA	5168325	5157774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
Isoform_81677_208	chr19	-	2941	16	NIC	ENSMUSG00000024862.17	novel	2940	16	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	17.0507738501479	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCTTGTTTTGAGGAG	NA	False	NA	-2	True	AATAAA	-17	NA	5168324	5157774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
Isoform_81678_10	chr19	-	3030	16	NIC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	-85	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	17.0507738501479	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCTTGTTTTGAGGAG	NA	False	NA	-2	True	AATAAA	-17	NA	5168413	5157774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
Isoform_81679_9	chr19	-	2651	15	NIC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	25.1344344658552	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	-1	True	AATAAA	-18	NA	5168309	5157773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5168149
Isoform_81680_4	chr19	-	2975	16	NNC	ENSMUSG00000024862.17	novel	2940	16	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	25.4877748473002	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCTTGTTTTGAGGAG	NA	False	NA	-2	True	AATAAA	-17	NA	5168307	5157774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160496_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
Isoform_81681_173	chr19	-	4346	24	FSM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	-5	528	-5	-528	multi-exon	FALSE	canonical	3	55	junction_19	9.30455099331212	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGGGCTCCTGCCCC	NA	False	NA	-4	True	AATAAA	-19	NA	5323152	5183713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
Isoform_81682_10	chr19	-	4852	24	FSM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	19	-2	2	2	multi-exon	FALSE	canonical	3	55	junction_19	9.30455099331212	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTATCTTCGATTA	NA	False	NA	NA	False	AATAAA	-27	NA	5323128	5183183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
Isoform_81684_8	chr19	-	4232	25	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	-4	-525	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	17.6493625947228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGCTCCTGCCCCTCA	NA	False	NA	-1	True	AATAAA	-22	NA	5323151	5183710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566_5322836_5322951
Isoform_81715_178	chr19	-	3174	21	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	100	junction_16	496.484226839081	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3911	False	NA	-25	True	AATAAA	-18	NA	5345438	5323959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338439_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
Isoform_81726_3559	chr19	-	3175	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	45	2	-2	-2	multi-exon	FALSE	canonical	3	1448	junction_15	340.757138589935	3559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGGCTAACTACTTG	3911	False	NA	-27	True	AATAAA	-16	NA	5345438	5323961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
Isoform_81729_95	chr19	-	3241	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	-19	0	-19	0	multi-exon	FALSE	canonical	3	1448	junction_15	340.757138589935	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3847	False	NA	-25	True	AATAAA	-18	NA	5345502	5323959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
Isoform_8176_5	chr10	+	5475	13	FSM	ENSMUSG00000020185.17	ENSMUST00000173471.8	3567	13	-45	-1863	0	-11	multi-exon	TRUE	canonical	0	0	junction_1	10.7480618407848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTATGTTATATTACTTG	NA	False	NA	22	True	AATAAA	-15	NA	110581328	110623234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_110581541_110582179_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
Isoform_81761_10	chr19	-	501	2	FSM	ENSMUSG00000118263.2	ENSMUST00000235637.2	405	2	-96	0	-96	0	multi-exon	FALSE	canonical	3	25	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTTCTTTACTCTTTA	9104	False	NA	-3	True	NA	NA	NA	5357540	5355905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5356162_5357295
Isoform_81767_291	chr19	-	749	3	FSM	ENSMUSG00000024844.16	ENSMUST00000170010.3	758	3	10	-1	10	0	multi-exon	FALSE	canonical	3	1351	junction_2	2345.5	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8996	False	NA	-8	True	AATAAA	-15	NA	5416381	5414667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5415187_5415845_5415985_5416290
Isoform_8177_7	chr10	+	2878	3	FSM	ENSMUSG00000020185.17	ENSMUST00000174857.8	2865	3	-15	2	11	-2	multi-exon	FALSE	canonical	3	33	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCGTTTTCTTTTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	110581310	110592496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_110581541_110582192_110582286_110589941
Isoform_81773_2916	chr19	-	735	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	524	2	-38	0	multi-exon	FALSE	canonical	3	4588	junction_2	727	2916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8705	False	NA	-8	True	AATAAA	-15	NA	5416672	5414667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5415187_5415845_5415985_5416595
Isoform_81779_44	chr19	-	811	3	NNC	ENSMUSG00000024844.16	novel	758	3	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	746	junction_2	2648	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	9023	False	NA	-8	True	AATAAA	-15	NA	5416354	5414667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_5415187_5415845_5415985_5416201
Isoform_81781_57	chr19	-	605	2	FSM	ENSMUSG00000024844.16	ENSMUST00000237704.2	743	2	138	0	-47	0	multi-exon	FALSE	canonical	3	1029	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8696	False	NA	-8	True	AATAAA	-15	NA	5416681	5414667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5415187_5416595
Isoform_8179_39	chr10	+	5461	13	FSM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	1	11	1	-11	multi-exon	FALSE	canonical	3	19	junction_6	6.98808509774554	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTATGTTATATTACTTG	NA	False	NA	22	True	AATAAA	-15	NA	110581329	110623234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
Isoform_81790_1723	chr19	-	2527	20	FSM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	27	2537	27	-1	multi-exon	FALSE	canonical	3	368	junction_1	46.7672968579718	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGGTTGTGCTGCTGT	9067	False	NA	-9	True	AATAAA	-18	NA	5438704	5430087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
Isoform_81791_305	chr19	-	2569	20	FSM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	-15	2537	-15	-1	multi-exon	FALSE	canonical	3	368	junction_1	46.7672968579718	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGGTTGTGCTGCTGT	9025	False	NA	-9	True	AATAAA	-18	NA	5438746	5430087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
Isoform_81797_27	chr19	-	2884	19	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	26	0	intron_retention	FALSE	canonical	3	368	junction_1	45.1945041999195	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9066	False	NA	-8	True	AATAAA	-19	NA	5438705	5430086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
Isoform_81807_8	chr19	-	1618	7	ISM	ENSMUSG00000039330.6	ENSMUST00000235569.2	1726	8	1281	-1	1281	1	3prime_fragment	TRUE	canonical	3	8	junction_6	13.7234592334926	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACAGTGTGAGACTTCTG	6265	False	NA	NA	False	ATTAAA	-14	NA	5451273	5440075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_5440226_5440636_5440756_5440941_5441042_5444310_5444482_5449940_5450089_5450261_5450966_5451047
Isoform_81809_8	chr19	-	917	7	FSM	ENSMUSG00000024914.17	ENSMUST00000148219.9	727	7	-211	21	9	0	multi-exon	FALSE	canonical	3	40	junction_1	395.234705235031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5474998	5472854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5473004_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
Isoform_8181_3	chr10	+	1347	5	FSM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	-11	-556	-11	-19	multi-exon	FALSE	canonical	3	157	junction_1	21.9374109684803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTACCACCTCTTAAT	NA	False	NA	12	True	AATAAA	-13	NA	110756039	110775356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497
Isoform_81811_13	chr19	-	790	6	FSM	ENSMUSG00000024914.17	ENSMUST00000136579.3	734	6	-38	-18	-9	2	multi-exon	TRUE	canonical	3	999	junction_1	82.8700187039921	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	5474580	5472852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388
Isoform_81813_199	chr19	-	807	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	171	14	-21	2	multi-exon	FALSE	canonical	3	999	junction_1	76.7282361469506	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	5474836	5472852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
Isoform_81814_193	chr19	-	954	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	24	14	24	2	multi-exon	FALSE	canonical	3	999	junction_1	76.7282361469506	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	5474983	5472852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
Isoform_81816_68	chr19	-	976	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	1	15	1	1	multi-exon	FALSE	canonical	3	999	junction_1	76.7282361469506	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5475006	5472853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
Isoform_81818_9	chr19	-	975	7	FSM	ENSMUSG00000024914.17	ENSMUST00000113674.8	939	7	-34	-2	24	2	multi-exon	FALSE	canonical	3	65	junction_3	385.460655147405	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	5474983	5472852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5473054_5473358_5473448_5473587_5473703_5473799_5473920_5474209_5474304_5474388_5474462_5474700
Isoform_81821_4	chr19	-	1233	10	FSM	ENSMUSG00000024910.6	ENSMUST00000025844.6	1241	10	8	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_5	1.15470053837925	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGTGGATTCAGCT	NA	False	NA	NA	False	CATAAA	-17	NA	5518527	5515267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5515480_5515557_5515759_5515832_5515898_5516047_5516174_5516258_5516340_5516416_5516514_5516608_5516764_5517050_5517165_5517865_5517951_5518430
Isoform_81822_28	chr19	-	1717	15	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	438	8	-29	0	3prime_fragment	FALSE	canonical	3	83	junction_4	10.1992896911541	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAATGCCAAGGTCCT	NA	False	NA	-6	True	AATAAA	-31	NA	5537992	5532867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789
Isoform_81823_169	chr19	-	1980	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	79	8	-12	0	multi-exon	FALSE	canonical	3	74	junction_15	11.5573930163049	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAATGCCAAGGTCCT	NA	False	NA	-6	True	AATAAA	-31	NA	5538351	5532867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
Isoform_81824_14	chr19	-	2023	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	37	7	37	1	multi-exon	FALSE	canonical	3	74	junction_15	11.5573930163049	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGCCAAGGTCCTT	NA	False	NA	-5	True	AATAAA	-32	NA	5538393	5532866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
Isoform_81826_4	chr19	-	2121	15	NIC	ENSMUSG00000024906.11	novel	2067	16	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	74	junction_14	11.3560197108613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCAAGGTCCTTCTGAA	NA	False	NA	0	True	AATAAA	-37	NA	5538348	5532861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536617_5537052_5537136_5537789_5537920_5538015
Isoform_81827_5	chr19	-	2169	15	NIC	ENSMUSG00000024906.11	novel	2067	16	NA	NA	-34	1	intron_retention	FALSE	canonical	3	74	junction_14	11.3560197108613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGCCAAGGTCCTT	NA	False	NA	-5	True	AATAAA	-32	NA	5538373	5532866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
Isoform_81828_4	chr19	-	1856	15	NIC	ENSMUSG00000024906.11	novel	2067	16	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	7	junction_3	25.7285674625205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCAAGGTCCTTCTGAA	NA	False	NA	0	True	AATAAA	-37	NA	5538350	5532861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5533058_5533135_5533220_5533482_5533587_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
Isoform_81829_3	chr19	-	2250	14	NIC	ENSMUSG00000024906.11	novel	2067	16	NA	NA	-39	1	intron_retention	FALSE	canonical	3	74	junction_13	11.5891195656828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGCCAAGGTCCTT	NA	False	NA	-5	True	AATAAA	-32	NA	5538378	5532866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5533058_5533135_5533220_5533482_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
Isoform_8183_183	chr10	+	889	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	390	105	-11	3	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCAGAGGAGCTGTTG	NA	False	NA	34	True	AATAAA	-35	NA	110756039	110775378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
Isoform_81831_4	chr19	-	2483	11	ISM	ENSMUSG00000056185.6	ENSMUST00000237945.2	2229	12	-10	3042	1	1	5prime_fragment	FALSE	canonical	0	0	junction_8	3.98622628559895	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCGGCTTGCCTTTACT	74	False	NA	-3	True	AATAAA	-18	NA	5560534	5545304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_5546011_5546085_5546246_5546343_5547054_5547317_5547394_5547474_5547581_5547702_5547808_5547932_5548057_5548207_5548330_5548439_5548535_5548747_5548853_5560360
Isoform_81833_40	chr19	-	2059	13	ISM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	192	2	-1	0	intron_retention	FALSE	canonical	3	118	junction_10	98.9692362414817	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3632	False	NA	-5	True	AATAAA	-16	NA	5660073	5653043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879
Isoform_81835_244	chr19	-	1960	14	FSM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	192	2	-1	0	multi-exon	FALSE	canonical	3	118	junction_10	96.4922046702747	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3632	False	NA	-5	True	AATAAA	-16	NA	5660073	5653043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_81837_25	chr19	-	1986	14	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	117.018432776497	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCAGGAGTTCTTA	3632	False	NA	-6	True	AATAAA	-15	NA	5660073	5653044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5659013_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_81838_53	chr19	-	1903	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	3	-1	-1	0	multi-exon	FALSE	canonical	3	222	junction_9	58.4797768251612	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3632	False	NA	-5	True	AATAAA	-16	NA	5660073	5653043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
Isoform_8184_8	chr10	+	987	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	388	9	-13	-9	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGTTCTTAAAAAGACAAT	NA	False	NA	130	True	ATTAAA	-12	NA	110756037	110775474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
Isoform_81840_307	chr19	-	1802	13	FSM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	-14	-402	1	0	multi-exon	FALSE	canonical	3	222	junction_9	61.0948147463342	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3634	False	NA	-5	True	AATAAA	-16	NA	5660071	5653043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_81842_11	chr19	-	2043	13	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	118	junction_9	100.21144312569	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3630	False	NA	-5	True	AATAAA	-16	NA	5660075	5653043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_81843_13	chr19	-	1883	12	NIC	ENSMUSG00000024926.11	novel	1386	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	222	junction_8	63.8080800085707	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3634	False	NA	-5	True	AATAAA	-16	NA	5660071	5653043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_81846_7	chr19	-	2038	9	ISM	ENSMUSG00000056917.14	ENSMUST00000236006.2	3513	16	6372	2	-426	1	intron_retention	FALSE	canonical	3	60	junction_4	8.95038406997152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTCTATTTGTGTTTG	NA	False	NA	-8	True	AAAAAG	-19	NA	5705291	5701220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574
Isoform_81849_5	chr19	-	3583	17	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_16	19.3761088392381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTCTATTTGTGTTTG	8117	False	NA	-8	True	AAAAAG	-19	NA	5713715	5701220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711652_5713631
Isoform_8185_5	chr10	+	1069	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	188	127	188	-19	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTACCACCTCTTAAT	NA	False	NA	12	True	AATAAA	-13	NA	110755837	110775356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
Isoform_81850_7	chr19	-	3837	18	FSM	ENSMUSG00000056917.14	ENSMUST00000071857.13	3812	18	-19	-6	1	0	multi-exon	TRUE	canonical	2	3	junction_16	22.9642417985895	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTTGTGTTTGTGTGT	8125	False	NA	-3	True	AAAAAG	-24	NA	5713707	5701215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5712615_5712870_5713631
Isoform_81851_39	chr19	-	3591	17	FSM	ENSMUSG00000056917.14	ENSMUST00000164304.9	3584	17	-7	0	-7	0	multi-exon	FALSE	canonical	3	17	junction_16	17.2005632175228	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTTGTGTTTGTGTGT	8117	False	NA	-3	True	AAAAAG	-24	NA	5713715	5701215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
Isoform_81853_22	chr19	-	3530	16	FSM	ENSMUSG00000056917.14	ENSMUST00000169854.2	3583	16	18	35	6	7	multi-exon	FALSE	canonical	3	8	junction_15	19.0524422464826	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8115	False	NA	-35	True	AAGAAA	-18	NA	5713717	5701247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5713631
Isoform_81854_3	chr19	-	2733	15	NIC	ENSMUSG00000056917.14	novel	3583	16	NA	NA	6	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	20.504354938124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAACAACAAGAA	8115	False	NA	-34	True	AAGAAA	-19	NA	5713717	5701246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5713631
Isoform_81855_3	chr19	-	3626	16	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	-1	7	intron_retention	FALSE	canonical	3	17	junction_15	17.6320415405843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8123	False	NA	-35	True	AAGAAA	-18	NA	5713709	5701247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
Isoform_81856_3	chr19	-	3636	16	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	1	7	intron_retention	FALSE	canonical	3	9	junction_15	18.9743686763662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8145	False	NA	-35	True	AAGAAA	-18	NA	5713687	5701247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711687_5713631
Isoform_81861_21	chr19	-	7041	35	FSM	ENSMUSG00000054874.13	ENSMUST00000113615.9	7264	35	222	1	9	-1	multi-exon	FALSE	canonical	3	44	junction_25	21.6322679648029	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCAGTTTTATTTTCT	NA	False	NA	-3	True	NA	NA	NA	5738714	5714663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
Isoform_81864_12	chr19	-	7038	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	3	31	junction_28	24.0650071156035	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738713	5714662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
Isoform_81865_11	chr19	-	7089	35	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_25	22.9138600567203	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738722	5714662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
Isoform_81868_3	chr19	-	3160	19	FSM	ENSMUSG00000024937.16	ENSMUST00000236215.2	3160	19	-5	5	0	0	multi-exon	FALSE	canonical	2	6	junction_10	3.83655259347101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACCAGCGCCTGCCCT	NA	False	NA	NA	False	AATAAA	-11	NA	5776303	5758082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770212_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
Isoform_81870_5	chr19	-	3601	19	NNC	ENSMUSG00000024937.16	novel	6404	19	NA	NA	16	-1	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_10	4.27200187265877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGCGCCTGCCCTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	5776329	5758078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5769801_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
Isoform_81871_24	chr19	-	1176	2	FSM	ENSMUSG00000024939.7	ENSMUST00000161368.2	1160	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	14	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5779697	5778114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5778858_5779264
Isoform_81872_10	chr19	-	2508	5	NIC	ENSMUSG00000118125.2	novel	2532	5	NA	NA	-14	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	202.957353894852	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5781755	5778114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5778858_5779264_5780741_5781268_5781354_5781471_5781624_5781703
Isoform_81873_125	chr19	-	1188	2	FSM	ENSMUSG00000024939.7	ENSMUST00000099955.4	1197	2	9	0	-9	0	multi-exon	FALSE	canonical	3	87	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5779670	5778114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5778897_5779264
Isoform_81877_19	chr19	-	1240	2	FSM	ENSMUSG00000024939.7	ENSMUST00000116558.3	1189	2	-50	-1	-30	1	multi-exon	FALSE	canonical	3	13	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTGCCTGGTTAATTG	NA	False	NA	0	True	AATAAA	-18	NA	5779711	5778113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5778907_5779264
Isoform_81879_10	chr19	-	784	4	NIC	ENSMUSG00000079478.10	novel	699	4	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	217.355827056823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTTTTTCCTCCGCG	NA	False	NA	-19	True	NA	NA	NA	5781755	5780352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5780741_5781161_5781354_5781471_5781624_5781703
Isoform_81880_31	chr19	-	661	4	FSM	ENSMUSG00000079478.10	ENSMUST00000159693.2	705	4	26	18	-7	-18	multi-exon	FALSE	canonical	0	0	junction_2	231.015631986717	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTTTTTCCTCCGCG	NA	False	NA	-19	True	NA	NA	NA	5781734	5780352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5780741_5781268_5781354_5781466_5781624_5781703
Isoform_81881_11	chr19	-	2897	4	FSM	ENSMUSG00000079478.10_ENSMUSG00000024939.7	ENSMUST00000025885.6	699	4	18	-2216	-10	0	multi-exon	FALSE	canonical	3	466	junction_2	15.6276108929747	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5781737	5778114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
Isoform_81882_278	chr19	-	658	4	FSM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	18	23	-10	-19	multi-exon	FALSE	canonical	3	466	junction_2	15.6276108929747	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACAGTTTTTCCTCCGC	NA	False	NA	-20	True	NA	NA	NA	5781737	5780353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
Isoform_81884_7	chr19	-	795	3	NIC	ENSMUSG00000079478.10	novel	699	4	NA	NA	0	-18	intron_retention	FALSE	canonical	3	476	junction_2	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTTTTTCCTCCGCG	NA	False	NA	-19	True	NA	NA	NA	5781755	5780352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5780741_5781268_5781624_5781703
Isoform_81887_37	chr19	-	2619	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236773.2	2395	17	11	-235	11	-1	multi-exon	FALSE	canonical	3	43	junction_4	63.7916224417439	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9921	False	NA	-12	True	AATAAA	-12	NA	5821415	5808455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809368_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
Isoform_81888_39	chr19	-	2572	17	FSM	ENSMUSG00000024941.10	ENSMUST00000025890.10	2586	17	14	0	11	0	multi-exon	FALSE	canonical	3	22	junction_5	68.5770552007011	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9921	False	NA	-11	True	AATAAA	-13	NA	5821415	5808454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
Isoform_81891_408	chr19	-	2623	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	32	76	11	0	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9921	False	NA	-11	True	AATAAA	-13	NA	5821415	5808454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
Isoform_81893_7	chr19	-	2729	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	32	-30	11	30	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCGAAGTTTCTAGGA	9921	False	NA	95	True	ATTAAA	-11	NA	5821415	5808348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
Isoform_81898_8	chr19	-	3034	2	ISM	ENSMUSG00000092274.4	ENSMUST00000174829.2	1030	4	-219	-1379	0	5	intron_retention	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATTGTCATGGCTGTT	10001	False	NA	-7	True	AATAAA	-20	NA	5895506	5892329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_5894463_5894605
Isoform_81903_283	chr19	-	2963	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	2	1539	2	-1539	multi-exon	FALSE	canonical	3	167	junction_1	18.6118241986109	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGGAATGGTTATAAT	4337	False	NA	-24	True	AATAAA	-15	NA	5925300	5901268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
Isoform_81907_22	chr19	-	2966	11	NIC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	15	-1537	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	59.3	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGAATGGTTATAATAT	4350	False	NA	-22	True	AATAAA	-17	NA	5925287	5901266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924837_5925118
Isoform_81908_12	chr19	-	2151	2	FSM	ENSMUSG00000044390.6	ENSMUST00000055911.6	2115	2	-42	6	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGGATGTGGAGGACC	8024	False	NA	NA	False	AATAAA	-14	NA	5944177	5941171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5943143_5943997
Isoform_81909_29	chr19	-	2110	2	FSM	ENSMUSG00000044390.6	ENSMUST00000236767.2	2155	2	44	1	2	-1	multi-exon	FALSE	canonical	2	7	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGGATGTGGAGGACC	8068	False	NA	NA	False	AATAAA	-14	NA	5944133	5941171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5943146_5943997
Isoform_8192_6	chr10	+	3189	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	-8	4023	-8	-528	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTCAACATTGAATCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	111000604	111129087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
Isoform_81920_2060	chr19	-	2369	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	84	861	5	10	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	2060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTGTCTCTTGACTC	1356	False	NA	-16	True	AATAAA	-24	NA	5962815	5947404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
Isoform_81921_31	chr19	-	2625	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	65	624	1	247	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAACTTTAGCATTTTC	1337	False	NA	NA	False	TATAAA	-33	NA	5962834	5947167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
Isoform_81922_49	chr19	-	2436	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	7	871	7	0	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1279	False	NA	-26	True	AATAAA	-14	NA	5962892	5947414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
Isoform_81929_14	chr19	-	1487	2	FSM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	-1	1925	-1	-1925	multi-exon	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATCCTGTCCCCTT	NA	False	NA	-13	True	AATAAA	-18	NA	5974845	5967588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5969022_5974791
Isoform_8193_37	chr10	+	7150	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	52	2	2	-2	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGATCCAGTGACTC	NA	False	NA	5	True	AATAAA	-16	NA	111000664	111133108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
Isoform_81930_7	chr19	-	1525	2	FSM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	-31	1917	-31	-1917	multi-exon	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCCCCTTGTCCCAGG	NA	False	NA	-5	True	AATAAA	-26	NA	5974875	5967580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5969022_5974791
Isoform_81939_218	chr19	-	2375	18	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	3	37	junction_17	91.7598792094124	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTTTAATCTTTTTTT	1638	False	NA	-5	True	AATAAA	-16	NA	6014218	5990574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
Isoform_81941_158	chr19	-	2446	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	-30	5	-30	-5	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTTTAATCTTTTTTT	1596	False	NA	-5	True	AATAAA	-16	NA	6014260	5990574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
Isoform_81942_1464	chr19	-	2379	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	37	5	-1	-5	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTTTAATCTTTTTTT	1663	False	NA	-5	True	AATAAA	-16	NA	6014193	5990574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
Isoform_81951_32	chr19	-	2366	18	FSM	ENSMUSG00000024833.16	ENSMUST00000165143.3	2391	18	27	-2	-6	2	multi-exon	FALSE	canonical	3	24	junction_1	92.2413338358681	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1653	False	NA	NA	False	NA	NA	NA	6014203	5991132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
Isoform_81963_21	chr19	-	2307	16	ISM	ENSMUSG00000024942.20	ENSMUST00000025891.11	3062	22	5930	0	5927	0	3prime_fragment	FALSE	canonical	2	82	junction_11	44.4894993853106	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	8524	False	NA	-6	True	AATAAA	-14	NA	6059306	6038572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116
Isoform_81970_376	chr19	-	3023	22	FSM	ENSMUSG00000024942.20	ENSMUST00000025891.11	3062	22	34	5	31	-4	multi-exon	FALSE	canonical	2	82	junction_11	40.0795693849892	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTACATCTGTCTCTGGGT	2628	False	NA	-11	True	AATAAA	-9	NA	6065202	6038577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
Isoform_81972_92	chr19	-	3011	22	FSM	ENSMUSG00000024942.20	ENSMUST00000164843.10	3122	22	111	0	3	0	multi-exon	FALSE	canonical	2	39	junction_21	51.1945734794372	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	2014	False	NA	-7	True	AATAAA	-13	NA	6065816	6038573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065765
Isoform_81973_23	chr19	-	3098	22	FSM	ENSMUSG00000024942.20	ENSMUST00000164843.10	3122	22	20	4	20	-4	multi-exon	FALSE	canonical	2	39	junction_21	51.1945734794372	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTACATCTGTCTCTGGGT	1923	False	NA	-11	True	AATAAA	-9	NA	6065907	6038577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065765
Isoform_81974_13	chr19	-	3021	21	NIC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	25	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_10	51.2800887284724	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	2622	False	NA	-7	True	AATAAA	-13	NA	6065208	6038573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
Isoform_81975_265	chr19	-	1711	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	30	23	3	-23	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAATAATCATCTGAAA	NA	False	NA	-23	True	ATTAAA	-19	NA	6107785	6103674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
Isoform_81976_479	chr19	-	683	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	30	1051	3	258	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATGTGTCCACTTGAG	NA	False	NA	-8	True	CATAAA	-18	NA	6107785	6104702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
Isoform_81982_12	chr19	-	1767	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	-26	23	-26	-23	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAATAATCATCTGAAA	NA	False	NA	-23	True	ATTAAA	-19	NA	6107841	6103674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
Isoform_81984_13	chr19	-	1520	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	-29	273	-29	2	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGGTGTTCAGAACCTGC	10007	False	NA	-13	True	ATTAAA	-17	NA	6107844	6103924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
Isoform_81986_16	chr19	-	1309	3	FSM	ENSMUSG00000007338.11	ENSMUST00000235520.2	1311	3	3	-1	3	1	multi-exon	FALSE	canonical	3	20	junction_2	445.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGGTGTTCAGAACCTG	NA	False	NA	-14	True	ATTAAA	-16	NA	6107785	6103925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6105013_6105105_6105231_6107688
Isoform_81988_12	chr19	-	1560	3	FSM	ENSMUSG00000007338.11	ENSMUST00000235520.2	1311	3	3	-252	3	-23	multi-exon	FALSE	canonical	3	20	junction_2	445.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAATAATCATCTGAAA	NA	False	NA	-23	True	ATTAAA	-19	NA	6107785	6103674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6105013_6105105_6105231_6107688
Isoform_8199_4	chr10	+	7056	23	FSM	ENSMUSG00000020189.16	ENSMUST00000095310.3	3622	23	59	-3493	59	-2	multi-exon	FALSE	canonical	2	6	junction_2	18.6097370763154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGATCCAGTGACTC	NA	False	NA	5	True	AATAAA	-16	NA	111000721	111133108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111001058_111040595_111040702_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
Isoform_81990_6	chr19	-	1349	10	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	76.3254888416287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9953	False	NA	0	True	AATAAA	-15	NA	6117880	6112850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116594_6116997_6117053_6117152_6117350_6117698
Isoform_81991_9	chr19	-	1127	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	101.258873067993	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	-4	True	NA	0	True	AATAAA	-15	NA	6117855	6112850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116594_6116997_6117053_6117698
Isoform_81992_9	chr19	-	1181	8	ISM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	739	0	-11	0	3prime_fragment	FALSE	canonical	3	192	junction_3	31.9125079438346	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	4741	False	NA	0	True	AATAAA	-15	NA	6117133	6112850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997
Isoform_81993_243	chr19	-	1454	10	FSM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	17	0	2	0	multi-exon	FALSE	canonical	3	192	junction_3	30.8704981223334	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	-4	True	NA	0	True	AATAAA	-15	NA	6117855	6112850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
Isoform_81996_10	chr19	-	1762	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_3	32.6410401182315	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9944	False	NA	0	True	AATAAA	-15	NA	6117889	6112850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6117053_6117152_6117350_6117698
Isoform_81998_16	chr19	-	912	5	FSM	ENSMUSG00000024799.17	ENSMUST00000160354.8	1443	5	-64	595	2	7	multi-exon	FALSE	canonical	3	213	junction_4	26.5988721565408	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCGCGCGCATTTGGCT	9963	False	NA	-3	True	TATAAA	-20	NA	6117870	6116151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
Isoform_8200_4	chr10	+	7162	23	FSM	ENSMUSG00000020189.16	ENSMUST00000095310.3	3622	23	-46	-3494	4	-1	multi-exon	FALSE	canonical	2	6	junction_2	18.6097370763154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATCCAGTGACTCT	NA	False	NA	6	True	AATAAA	-17	NA	111000616	111133109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111001058_111040595_111040702_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
Isoform_82003_399	chr19	-	2490	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	36	149	3	-1	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1023	False	NA	-4	True	AATAAA	-17	NA	6127225	6118020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_82004_179	chr19	-	2514	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	12	149	12	-1	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	999	False	NA	-4	True	AATAAA	-17	NA	6127249	6118020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_82006_15	chr19	-	2855	9	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	124	junction_6	17.2753437013566	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1023	False	NA	-4	True	AATAAA	-17	NA	6127225	6118020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_82009_17	chr19	-	2557	10	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	45.903548909307	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTGCCTGCAGGGGC	1023	False	NA	-3	True	AATAAA	-18	NA	6127225	6118019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6118472_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_8201_27	chr10	+	2720	3	NNC	ENSMUSG00000035759.5	novel	2744	2	NA	NA	10	10	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAATTGTCCTTGTGGTT	NA	False	NA	NA	False	AATAAA	-30	NA	111134549	111137598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_111134769_111135073_111137471_111137494
Isoform_82011_7	chr19	-	2223	9	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	23	908	-5	-1	5prime_fragment	FALSE	canonical	3	124	junction_6	16.0735613664178	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTCTCTAGGTCCAG	1010	False	NA	NA	False	ATTAAA	-15	NA	6127238	6118779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_82013_21	chr19	-	835	2	FSM	ENSMUSG00000024797.15	ENSMUST00000160590.2	840	2	5	0	3	0	multi-exon	FALSE	canonical	3	178	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTAACTTTTGTTTC	1023	False	NA	1	True	ATTAAA	-20	NA	6127225	6125932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6126523_6126980
Isoform_82015_28	chr19	-	1270	8	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	201.730978669866	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGAAGCAGCTTTT	6673	False	NA	NA	False	AATAAA	-16	NA	6134740	6130793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134675
Isoform_82017_598	chr19	-	1335	8	FSM	ENSMUSG00000024792.10	ENSMUST00000160977.8	922	8	-9	-404	3	1	multi-exon	FALSE	canonical	3	381	junction_7	88.3658905474556	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGAAGCAGCTTTT	6459	False	NA	NA	False	AATAAA	-16	NA	6134954	6130793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
Isoform_82018_308	chr19	-	1266	8	FSM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	19	2	3	1	multi-exon	FALSE	canonical	3	219	junction_7	142.172789382555	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGAAGCAGCTTTT	6459	False	NA	NA	False	AATAAA	-16	NA	6134954	6130793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
Isoform_82024_381	chr19	-	1334	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	105	3	105	-3	multi-exon	FALSE	canonical	3	283	junction_1	0	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATAACAGGAACTTTTA	NA	False	NA	-12	True	AATAAA	-22	NA	6168575	6166032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6166618_6167826
Isoform_82030_5	chr19	-	3947	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	104	-2609	104	2609	multi-exon	FALSE	canonical	3	283	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTCTTTGTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	6168576	6163420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6166618_6167826
Isoform_82032_129	chr19	-	1583	8	FSM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	51	1	51	-1	multi-exon	FALSE	canonical	3	79	junction_5	6.49018096662888	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGTCCATTTGCTTATT	NA	False	NA	0	True	NA	NA	NA	6178283	6169429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
Isoform_82034_583	chr19	-	871	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	412	3	4	0	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCTGAGCCATTTG	NA	False	NA	-11	True	AATAAA	-15	NA	6191166	6184415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
Isoform_82036_73	chr19	-	893	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	390	3	-18	0	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCTGAGCCATTTG	NA	False	NA	-11	True	AATAAA	-15	NA	6191188	6184415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
Isoform_82039_21	chr19	-	3473	3	NIC	ENSMUSG00000024944.7	novel	2305	4	NA	NA	1	1	intron_retention	FALSE	canonical	3	728	junction_2	28	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAGCCATTTGTGAG	NA	False	NA	-7	True	AATAAA	-19	NA	6191169	6184411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6187671_6187759_6187871_6191066
Isoform_82040_23	chr19	-	711	3	ISM	ENSMUSG00000024944.7	ENSMUST00000134821.2	2305	4	1	2770	1	326	5prime_fragment	FALSE	canonical	3	728	junction_2	28	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAAGACTTGTCTTGTTG	NA	False	NA	-2	True	NA	NA	NA	6191169	6187173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_6187671_6187759_6187871_6191066
Isoform_82043_9	chr19	-	2324	14	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	30.6883552496545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGCTTGCTTTATTGA	NA	False	NA	-1	True	AATAAA	-13	NA	6285854	6277795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6284761_6285541
Isoform_82044_372	chr19	-	2711	14	FSM	ENSMUSG00000024777.11	ENSMUST00000025695.10	2742	14	30	1	1	-1	multi-exon	TRUE	canonical	3	82	junction_11	13.4199357135648	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGCTTGCTTTATTGA	NA	False	NA	-1	True	AATAAA	-13	NA	6285872	6277795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
Isoform_82047_6	chr19	-	2833	13	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	82	junction_10	12.3903524297468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGCTTGCTTTATTGA	NA	False	NA	-1	True	AATAAA	-13	NA	6285884	6277795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
Isoform_82048_3	chr19	-	600	3	FSM	ENSMUSG00000079467.9	ENSMUST00000113496.2	518	3	-15	-67	-15	-9	multi-exon	FALSE	canonical	2	2	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCACCTAAACACATAA	NA	False	NA	NA	False	NA	NA	NA	6413804	6405560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6405871_6410689_6410812_6413636
Isoform_82049_4	chr19	-	1655	5	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	9155	2	8104	-2	3prime_fragment	FALSE	canonical	3	46	junction_1	7.08431365765238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGATCTGTGGTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	6808849	6806579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641
Isoform_82050_4	chr19	-	1748	5	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	9064	0	8013	0	3prime_fragment	FALSE	canonical	3	46	junction_1	7.08431365765238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGATCTGTGGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	6808940	6806577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641
Isoform_82051_52	chr19	-	3142	17	FSM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	-1	-1	-1	1	multi-exon	FALSE	canonical	3	33	junction_16	8.80961832317383	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	6818005	6806576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
Isoform_82052_107	chr19	-	3117	17	FSM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	24	-1	0	1	multi-exon	FALSE	canonical	3	33	junction_16	8.80961832317383	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	6817980	6806576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
Isoform_82053_5	chr19	-	3185	16	NIC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	1	5	intron_retention	FALSE	canonical	1	1	junction_15	14.2791222886189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGGTTTGTGTTCAT	NA	False	NA	-1	True	AATAAA	-23	NA	6818003	6806572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817747
Isoform_82054_3	chr19	-	3235	16	NIC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	-2	1	intron_retention	FALSE	canonical	3	33	junction_15	9.09798512492372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	6818006	6806576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6817047_6817701_6817774_6817860
Isoform_82055_3	chr19	-	3005	16	NIC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	14.1509324388497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	6817984	6806576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816827_6817047_6817701_6817774_6817860
Isoform_82058_230	chr19	-	1231	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	30	1	30	-1	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGGTACAGGGTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	6887444	6884074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
Isoform_82059_97	chr19	-	1257	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	5	0	5	0	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6887469	6884073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
Isoform_82061_23	chr19	-	1591	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	-329	0	-329	0	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6887803	6884073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
Isoform_82065_540	chr19	-	2246	7	FSM	ENSMUSG00000024955.16	ENSMUST00000025906.12	2241	7	-6	1	-1	-1	multi-exon	FALSE	canonical	3	79	junction_4	9.26762584963856	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACGGTGGTCGGTGAGTC	9679	False	NA	-2	True	AATATA	-15	NA	6899182	6888346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898989
Isoform_82067_20	chr19	-	2344	7	NIC	ENSMUSG00000024955.16	novel	2274	7	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	35.8457342882897	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACACGGTGGTCGGTGAG	9676	False	NA	-4	True	AATATA	-13	NA	6899185	6888348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891661_6897430_6897768_6898989
Isoform_82068_6	chr19	-	1965	6	NIC	ENSMUSG00000024955.16	novel	2274	7	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	37.3876985116763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACACGGTGGTCGGTGAG	9718	False	NA	-4	True	AATATA	-13	NA	6899143	6888348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891661_6898989
Isoform_82069_10	chr19	-	755	5	FSM	ENSMUSG00000050623.6	ENSMUST00000057716.6	784	5	26	3	-2	-2	multi-exon	FALSE	canonical	3	36	junction_4	4.76969600708473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCAGTGCGTGGCTGCT	7416	False	NA	-2	True	ATTAAA	-19	NA	6902722	6899793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161_6902475_6902659
Isoform_8207_132	chr10	+	1414	13	FSM	ENSMUSG00000058799.17	ENSMUST00000219143.2	1365	13	-54	5	0	-5	multi-exon	FALSE	canonical	3	980	junction_10	384.309843167665	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACATTTTTTTTTTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	111309087	111330865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
Isoform_82070_3	chr19	-	800	5	FSM	ENSMUSG00000050623.6	ENSMUST00000237380.2	806	5	3	3	3	-2	multi-exon	FALSE	canonical	3	6	junction_4	16.5529453572468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCAGTGCGTGGCTGCT	7414	False	NA	-2	True	ATTAAA	-19	NA	6902724	6899793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161_6902518_6902659
Isoform_82071_3	chr19	-	2123	7	NIC	ENSMUSG00000024958.14	novel	1858	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	8.95203266799719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTCCTGTCACTCGT	6529	False	NA	-14	True	AATAAA	-17	NA	6918845	6915439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6915898_6916123_6916243_6916379_6916505_6916628_6916779_6916896_6917123_6917719_6917770_6917850
Isoform_82072_4	chr19	-	2226	6	FSM	ENSMUSG00000024958.14	ENSMUST00000238183.2	1255	6	-973	2	12	0	multi-exon	FALSE	canonical	3	22	junction_3	2.68328157299975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTCCTGTCACTCGT	6511	False	NA	-14	True	AATAAA	-17	NA	6918863	6915439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719
Isoform_82073_114	chr19	-	2148	7	FSM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	-302	12	12	0	multi-exon	FALSE	canonical	3	22	junction_3	2.47767812455308	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGTCACTCGTCTG	6511	False	NA	-11	True	AATAAA	-20	NA	6918863	6915436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
Isoform_82074_3	chr19	-	3102	7	FSM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	-1254	10	3	2	multi-exon	FALSE	canonical	3	22	junction_3	2.47767812455308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTCACTCGTCTGTT	5559	False	NA	-9	True	AATAAA	-22	NA	6919815	6915434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
Isoform_82076_4	chr19	-	1626	7	NIC	ENSMUSG00000024958.14	novel	1729	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	9.63356401107895	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCTGTCACTCGTCT	6504	False	NA	-12	True	AATAAA	-19	NA	6918870	6915437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917851_6918459
Isoform_8208_118	chr10	+	1444	13	FSM	ENSMUSG00000058799.17	ENSMUST00000219143.2	1365	13	-84	5	-26	-5	multi-exon	FALSE	canonical	3	980	junction_10	384.309843167665	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACATTTTTTTTTTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	111309057	111330865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
Isoform_8210_41	chr10	+	1298	15	NNC	ENSMUSG00000058799.17	novel	1512	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	750.770247336503	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGTTGGGAAATTTTT	NA	False	NA	18	True	AATAAA	-19	NA	111309087	111331006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_111309131_111309161_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911
Isoform_82109_1948	chr19	-	4231	31	FSM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	26	0	26	0	multi-exon	FALSE	canonical	3	577	junction_24	50.7714377272191	1948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4337	False	NA	-8	True	AATAAA	-16	NA	6947156	6931080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
Isoform_8211_22	chr10	+	1360	14	FSM	ENSMUSG00000058799.17	ENSMUST00000219961.2	1512	14	-31	183	-27	2	multi-exon	FALSE	canonical	3	75	junction_13	616.19895158057	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGTTGGGAAATTTTT	NA	False	NA	18	True	AATAAA	-19	NA	111309056	111331006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911
Isoform_82113_30	chr19	-	4106	31	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	40	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_30	127.230940506711	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	NA	False	NA	-8	True	AATAAA	-16	NA	6951679	6931080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6951562
Isoform_8213_592	chr10	+	2130	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-15	-765	0	0	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309087	111332745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
Isoform_82131_175	chr19	-	598	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	70	-4	9	1	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTGTATTTCTT	NA	False	NA	-2	True	TTTAAA	-36	NA	6957799	6955107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
Isoform_82132_10	chr19	-	659	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	9	-4	9	1	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTGTATTTCTT	NA	False	NA	-2	True	TTTAAA	-36	NA	6957860	6955107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
Isoform_82133_5	chr19	-	743	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	80	-159	19	156	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATATCTTCCCTGATAA	NA	False	NA	NA	False	AATAAA	-17	NA	6957789	6954952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
Isoform_82134_116	chr19	-	665	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	-22	-1	-22	1	multi-exon	FALSE	canonical	3	194	junction_5	200.859752065963	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTGTATTTCTT	NA	False	NA	-2	True	TTTAAA	-36	NA	6957830	6955107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
Isoform_82135_56	chr19	-	1203	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	-44	-1	-22	1	multi-exon	FALSE	canonical	3	113	junction_2	60.459352736639	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	4736	False	NA	0	True	GATAAA	-18	NA	6965041	6959839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
Isoform_82137_47	chr19	-	1276	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	-117	-1	-95	1	multi-exon	FALSE	canonical	3	113	junction_2	60.459352736639	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	4663	False	NA	0	True	GATAAA	-18	NA	6965114	6959839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
Isoform_82138_8	chr19	-	1157	6	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	103.315826473973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	4739	False	NA	0	True	GATAAA	-18	NA	6965038	6959839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964719
Isoform_82139_5	chr19	-	1237	6	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-102	-2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	103.315826473973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTGCTTCTGTCATT	4656	False	NA	-3	True	GATAAA	-15	NA	6965121	6959842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964719
Isoform_8214_377	chr10	+	3391	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-15	-2026	0	-5	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACTGGTGATATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	111309087	111334006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
Isoform_82142_54	chr19	-	1344	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	-64	1	-64	-1	multi-exon	FALSE	canonical	3	141	junction_2	52.2323867176508	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4694	False	NA	-2	True	GATAAA	-16	NA	6965083	6959841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
Isoform_82143_58	chr19	-	1291	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	-9	-1	-9	1	multi-exon	FALSE	canonical	3	141	junction_2	52.2323867176508	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	4749	False	NA	0	True	GATAAA	-18	NA	6965028	6959839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
Isoform_82145_21	chr19	-	1301	6	NIC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	-63	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	99.8651090221204	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4695	False	NA	-1	True	GATAAA	-17	NA	6965082	6959840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964719
Isoform_82147_3	chr19	-	1249	6	NIC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	-46	-4	combination_of_known_splicesites	FALSE	canonical	2	17	junction_3	99.8751220274599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATGGCTGCTTCTGTCA	4712	False	NA	-5	True	GATAAA	-13	NA	6965065	6959844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963657_6963855_6964141_6964185_6964719
Isoform_82148_19	chr19	-	1068	6	FSM	ENSMUSG00000024963.13	ENSMUST00000179118.2	840	6	-228	0	3	0	multi-exon	FALSE	canonical	3	37	junction_3	69.5097115516961	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9279	False	NA	-4	True	AATAAA	-17	NA	6969868	6965278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526
Isoform_82149_15	chr19	-	874	7	NNC	ENSMUSG00000024963.13	novel	840	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	78.2788817838715	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9935	False	NA	-4	True	AATAAA	-17	NA	6969950	6965278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526_6969641_6969916
Isoform_82150_6	chr19	-	937	7	NNC	ENSMUSG00000024963.13	novel	840	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	86.5653253650418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9935	False	NA	-4	True	AATAAA	-17	NA	6969950	6965278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526_6969641_6969853
Isoform_82151_78	chr19	-	1057	6	FSM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	17	0	17	0	multi-exon	FALSE	canonical	3	154	junction_3	27.3978101314685	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9293	False	NA	-4	True	AATAAA	-17	NA	6969854	6965278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526
Isoform_82153_3	chr19	-	1136	6	FSM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	-68	6	1	-2	multi-exon	FALSE	canonical	3	154	junction_3	27.3978101314685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCCTGTCCGATTCGGTC	9946	False	NA	-10	True	AATAAA	-11	NA	6969939	6965284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526
Isoform_82156_60	chr19	-	877	7	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_6	60.0194412947449	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9935	False	NA	-4	True	AATAAA	-17	NA	6969950	6965278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526_6969641_6969916
Isoform_82157_5	chr19	-	877	7	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-14	2	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_6	72.0819364026491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGATTCGGTCCTTCAGGT	10000	False	NA	-2	True	AATAAA	-19	NA	6969885	6965276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526_6969641_6969853
Isoform_82158_12	chr19	-	763	6	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	77.5035483058679	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9935	False	NA	-4	True	AATAAA	-17	NA	6969950	6965278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969916
Isoform_82159_8	chr19	-	1146	5	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	21	0	intron_retention	FALSE	canonical	3	188	junction_2	20.6942020865749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9297	False	NA	-4	True	AATAAA	-17	NA	6969850	6965278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_6965477_6965556_6965644_6966790_6967234_6968085_6968180_6969526
Isoform_8216_38	chr10	+	2188	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-74	-764	-55	-1	multi-exon	TRUE	canonical	3	980	junction_10	363.653962004586	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111309028	111332744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
Isoform_82160_129	chr19	-	1020	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	112	junction_2	17.04582060213	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	7025	False	NA	-3	True	AATAAA	-17	NA	6973425	6970385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
Isoform_82163_4	chr19	-	1837	10	ISM	ENSMUSG00000024965.10	ENSMUST00000040772.9	2587	15	5360	20	5236	1	intron_retention	FALSE	canonical	3	13	junction_3	4.57043640026736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTTCTTCTTCCTCCTC	7958	False	NA	-7	True	AATAAA	-18	NA	6991477	6976345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_6976889_6977006_6977149_6979124_6979250_6979580_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215
Isoform_82164_16	chr19	-	1833	11	ISM	ENSMUSG00000024965.10	ENSMUST00000040772.9	2587	15	5257	18	5133	3	3prime_fragment	FALSE	canonical	3	13	junction_3	4.73392015141785	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTCTTCCTCCTCTG	7855	False	NA	-5	True	AATAAA	-20	NA	6991580	6976343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_6976889_6977006_6977149_6979124_6979250_6979580_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215_6991319_6991427
Isoform_82167_5	chr19	-	2498	15	FSM	ENSMUSG00000024965.10	ENSMUST00000040772.9	2587	15	70	19	0	2	multi-exon	FALSE	canonical	0	0	junction_12	9.77945576717032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCTTCTTCCTCCTCT	5502	False	NA	-6	True	AATAAA	-19	NA	6996767	6976344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6976889_6977006_6977149_6979124_6979250_6979580_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215_6991319_6991427_6991597_6991695_6991816_6991984_6992219_6996033_6996208_6996645
Isoform_82168_8	chr19	-	766	3	NNC	ENSMUSG00000024965.10	novel	2856	14	NA	NA	19376	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	9.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTCTTCCTCCTCTG	8115	False	NA	-5	True	AATAAA	-20	NA	6977337	6976343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_6976889_6977006_6977149_6977258
Isoform_82188_5980	chr19	-	2103	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	5	0	5	0	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	5980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3768	False	NA	-8	True	AATAAA	-29	NA	7017330	6998069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
Isoform_82189_282	chr19	-	2166	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	-58	0	-58	0	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3705	False	NA	-8	True	AATAAA	-29	NA	7017393	6998069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
Isoform_8219_29	chr10	+	3447	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-74	-2023	-55	-8	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATACACTGGTGATAT	NA	False	NA	NA	False	AATAAA	-16	NA	111309028	111334003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
Isoform_82199_703	chr19	-	1025	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	44	644	-38	-636	multi-exon	FALSE	canonical	3	1089	junction_1	76.373351955305	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTGTGCGCTTCCCT	NA	False	NA	-7	True	ATTAAA	-18	NA	7183637	7176210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
Isoform_82200_374	chr19	-	1666	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	44	3	-38	-3	multi-exon	TRUE	canonical	3	1089	junction_1	76.373351955305	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGTCTGGCCCATGC	NA	False	NA	-1	True	AATAAA	-23	NA	7183637	7175569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
Isoform_82209_5521	chr19	-	496	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	47	7	-26	-7	multi-exon	FALSE	canonical	3	12296	junction_1	0	5521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAATGCATCATGTCCT	7413	False	NA	NA	False	AATAAA	-19	NA	7194934	7192524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7192850_7194763
Isoform_8221_277	chr10	+	1482	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	4	0	0	0	multi-exon	FALSE	canonical	3	684	junction_15	463.449884621364	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309087	111332745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
Isoform_82217_465	chr19	-	3238	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	441	junction_1	30.7431757816732	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218555	7203037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
Isoform_82218_562	chr19	-	3107	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	124	0	-3	0	multi-exon	TRUE	canonical	3	441	junction_1	30.7431757816732	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218424	7203037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
Isoform_8222_167	chr10	+	1512	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	-26	0	-26	0	multi-exon	FALSE	canonical	3	684	junction_15	463.449884621364	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309057	111332745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
Isoform_82225_23	chr19	-	2964	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	179.745576363432	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218440	7203037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207552_7207649_7211468_7211522_7212427_7212524_7218302
Isoform_82228_24	chr19	-	3306	6	FSM	ENSMUSG00000024764.11	ENSMUST00000237834.2	1569	6	18	-1755	-2	-1	multi-exon	FALSE	canonical	3	441	junction_1	33.2060235499525	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218401	7203038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218302
Isoform_82234_17	chr19	-	2876	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	120.360883937729	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAGAAAAAGAAAAAA	3880	False	NA	NA	False	AAGAAA	-12	NA	7319205	7254124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_82244_20	chr19	-	3279	19	FSM	ENSMUSG00000024969.16	ENSMUST00000171721.8	2660	19	-618	-1	2	1	multi-exon	FALSE	canonical	0	0	junction_4	113.063799863202	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3910	False	NA	NA	False	AAGAAA	-14	NA	7319175	7254122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
Isoform_82247_24	chr19	-	2694	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	110.626498734355	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3896	False	NA	NA	False	AAGAAA	-14	NA	7319189	7254122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_82248_22	chr19	-	2718	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	110.626498734355	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3872	False	NA	NA	False	AAGAAA	-14	NA	7319213	7254122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_82249_20	chr19	-	4083	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	110.626498734355	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3869	False	NA	-1	True	AATAAA	-20	NA	7319216	7252760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_82255_146	chr19	-	3048	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-173	-1	-2	1	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	4114	False	NA	NA	False	AAGAAA	-14	NA	7318971	7254122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
Isoform_82256_69	chr19	-	3253	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-378	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3909	False	NA	NA	False	AAGAAA	-14	NA	7319176	7254122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
Isoform_82258_32	chr19	-	4614	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-378	-1362	1	-1	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3909	False	NA	-2	True	AATAAA	-19	NA	7319176	7252761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
Isoform_82260_79	chr19	-	4413	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-176	-1363	-5	0	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	4111	False	NA	-1	True	AATAAA	-20	NA	7318974	7252760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
Isoform_82264_19	chr19	-	2751	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	105.935646083418	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3899	False	NA	NA	False	AAGAAA	-14	NA	7319186	7254122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7319131
Isoform_82267_200	chr19	-	2667	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3896	False	NA	NA	False	AAGAAA	-14	NA	7319189	7254122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_82268_159	chr19	-	4058	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3867	False	NA	-1	True	AATAAA	-20	NA	7319218	7252760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_82277_1037	chr19	-	1920	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	1	1231	1	-8	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAAGTTCTGTGTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	7360358	7335058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
Isoform_82278_352	chr19	-	1981	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	-60	1231	-60	-8	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAAGTTCTGTGTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	7360419	7335058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
Isoform_82282_46	chr19	-	1994	5	NIC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	2	-8	intron_retention	FALSE	canonical	3	309	junction_2	11.4345966260293	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAAGTTCTGTGTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	7360357	7335058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7352216_7360036
Isoform_82293_795	chr19	-	2812	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-47	-3	18	3	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	795	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGCAACTTTATTCT	8992	False	NA	-15	True	AATAAA	-20	NA	7460614	7403262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
Isoform_823_413	SIRV5	+	545	2	FSM	SIRV5A	SIRV511	546	2	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	0	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1009	2398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_1144_1987
Isoform_82313_13	chr19	-	2496	10	FSM	ENSMUSG00000024972.17	ENSMUST00000159983.8	2470	10	-22	-4	-22	4	multi-exon	FALSE	canonical	2	3	junction_8	5.03322295684717	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATATGTTAGTGGTTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	7584580	7574020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7575537_7576124_7576276_7578012_7578102_7578610_7578638_7579407_7579447_7580373_7580494_7581333_7581548_7581668_7581758_7584026_7584189_7584491
Isoform_82324_912	chr19	-	1404	8	FSM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	9	-20	9	20	multi-exon	FALSE	canonical	3	2940	junction_7	103.964868477534	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	8690340	8684930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
Isoform_82325_75	chr19	-	1433	8	FSM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	-23	-17	-23	17	multi-exon	FALSE	canonical	3	2940	junction_7	103.964868477534	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTGACTTTCATCC	NA	False	NA	-4	True	AATAAA	-19	NA	8690372	8684933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
Isoform_82328_4489	chr19	-	1854	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	9	-44	9	14	multi-exon	FALSE	canonical	3	2610	junction_8	198.183902915953	4489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGAGATTGTGACTTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	8691234	8684936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
Isoform_82338_352	chr19	-	1998	10	FSM	ENSMUSG00000010095.14	ENSMUST00000170157.8	2813	10	130	685	-41	20	multi-exon	FALSE	canonical	3	190	junction_9	923.220423635268	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	9159	False	NA	-1	True	AATAAA	-22	NA	8700603	8684930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8700347
Isoform_82351_22	chr19	-	757	5	FSM	ENSMUSG00000118346.2	ENSMUST00000237634.2	775	5	15	3	-7	-2	multi-exon	FALSE	canonical	3	67	junction_4	80.9073544246751	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCATGGATTTCTTGA	5089	False	NA	-7	True	AATATA	-14	NA	8751816	8749891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8750987_8751698
Isoform_82352_54	chr19	-	831	5	FSM	ENSMUSG00000118346.2	ENSMUST00000010249.7	818	5	11	-24	-11	-2	multi-exon	FALSE	canonical	3	161	junction_4	40.2833712591188	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCATGGATTTCTTGA	5085	False	NA	-7	True	AATATA	-14	NA	8751820	8749891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698
Isoform_82353_16	chr19	-	3544	15	Fusion	ENSMUSG00000118346.2_ENSMUSG00000003680.17	novel	2065	12	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	151	junction_7	37.4346369131093	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	9929	False	NA	-8	True	AATATA	-13	NA	8763652	8749892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
Isoform_82354_10	chr19	-	650	4	NIC	ENSMUSG00000118346.2	novel	775	5	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_3	106.565577097965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGGATTTCTTGATGT	5081	False	NA	-4	True	AATATA	-17	NA	8751824	8749888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_8750199_8750391_8750471_8750653_8750789_8751698
Isoform_82355_10	chr19	-	635	4	NIC	ENSMUSG00000118346.2	novel	775	5	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	101.226917807908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCATGGATTTCTTGA	5076	False	NA	-7	True	AATATA	-14	NA	8751829	8749891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_8750199_8750391_8750471_8750868_8750987_8751698
Isoform_82356_4	chr19	-	694	4	NIC	ENSMUSG00000118346.2	novel	818	5	NA	NA	10	-5	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	96.6885032807245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCATGGCATGGATTTCT	5084	False	NA	-10	True	AATATA	-11	NA	8751821	8749894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_8750199_8750391_8750471_8750868_8751057_8751698
Isoform_82357_4	chr19	-	1039	4	NIC	ENSMUSG00000118346.2	novel	818	5	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	161	junction_3	44.0302926025556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	5069	False	NA	-8	True	AATATA	-13	NA	8751836	8749892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_8750471_8750653_8750789_8750868_8751057_8751698
Isoform_82363_653	chr19	-	2037	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	27	1	-8	-1	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9928	False	NA	-4	True	AATAAA	-13	NA	8763653	8751856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
Isoform_82364_83	chr19	-	2066	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	-2	1	-2	-1	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9899	False	NA	-4	True	AATAAA	-13	NA	8763682	8751856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
Isoform_82366_15	chr19	-	1994	12	NIC	ENSMUSG00000003680.17	novel	2065	12	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	58.6434808929319	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9913	False	NA	-4	True	AATAAA	-13	NA	8763668	8751856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763631
Isoform_82367_35	chr19	-	1989	11	FSM	ENSMUSG00000003680.17	ENSMUST00000177056.8	2006	11	18	-1	-17	-1	multi-exon	FALSE	canonical	3	11	junction_10	58.7504042539283	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9919	False	NA	-4	True	AATAAA	-13	NA	8763662	8751856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8763573
Isoform_82368_13	chr19	-	1962	11	NIC	ENSMUSG00000003680.17	novel	2065	12	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	60.2213417319807	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGACGTGTCTATGCTC	9926	False	NA	-6	True	AATAAA	-11	NA	8763655	8751858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
Isoform_82372_1325	chr19	-	865	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	25	0	-17	0	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	-1	True	ATTAAA	-17	NA	8775916	8770490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
Isoform_82373_108	chr19	-	892	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	-4	2	-4	-2	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGGTTTGGTTTTAT	NA	False	NA	-3	True	ATTAAA	-15	NA	8775945	8770492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
Isoform_82375_16	chr19	-	708	7	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	548.478324295703	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGGTTTGGTTTTAT	NA	False	NA	-3	True	ATTAAA	-15	NA	8775921	8770492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8775587_8775698_8775822
Isoform_82379_6	chr19	-	2460	3	FSM	ENSMUSG00000071660.11	ENSMUST00000088092.6	1585	3	293	-1168	-77	1008	multi-exon	FALSE	canonical	3	241	junction_2	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTCAGCTGTCACT	2217	False	NA	-10	True	AATAAA	-16	NA	8796365	8787491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8789203_8793217_8793401_8795799
Isoform_82380_41	chr19	-	3489	3	FSM	ENSMUSG00000071660.11	ENSMUST00000088092.6	1585	3	324	-2228	-46	7	multi-exon	FALSE	canonical	3	241	junction_2	7	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTAGAAATTTATTTCA	2248	False	NA	-6	True	AATAAA	-18	NA	8796334	8786431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8789203_8793217_8793401_8795799
Isoform_82382_6	chr19	-	3852	3	FSM	ENSMUSG00000071660.11	ENSMUST00000088092.6	1585	3	-38	-2229	1	8	multi-exon	FALSE	canonical	3	241	junction_2	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTAGAAATTTATTTCAC	1886	False	NA	-5	True	AATAAA	-19	NA	8796696	8786430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8789203_8793217_8793401_8795799
Isoform_82383_225	chr19	-	3467	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	45	-3	6	3	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCATCTTAGAAATTTAT	1930	False	NA	-10	True	AATAAA	-14	NA	8796652	8786435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
Isoform_82384_104	chr19	-	3509	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	5	-5	5	5	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTAGAAATTTATTT	1890	False	NA	-8	True	AATAAA	-16	NA	8796692	8786433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
Isoform_82399_111	chr19	-	782	3	FSM	ENSMUSG00000071658.6	ENSMUST00000096259.6	1643	3	-16	877	-16	-877	multi-exon	TRUE	canonical	3	189	junction_2	8	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACGTCTGTGTTAGCG	4746	False	NA	-4	True	AATAAA	-19	NA	8816574	8815173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8815636_8815917_8816018_8816354
Isoform_82401_152	chr19	-	533	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	29	259	29	-259	multi-exon	FALSE	canonical	3	500	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGATTTCGCAGCTGG	NA	False	NA	-14	True	AATAAA	-15	NA	8858258	8857636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8857981_8858069
Isoform_82403_47	chr19	-	789	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	29	3	29	-3	multi-exon	FALSE	canonical	3	500	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTTGGAAAGACCAT	NA	False	NA	-11	True	AATGAA	-22	NA	8858258	8857380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8857981_8858069
Isoform_82406_3	chr19	-	1949	3	FSM	ENSMUSG00000071648.5	ENSMUST00000096242.5	1517	3	-437	5	-437	-5	multi-exon	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATCACTGTTCTCCCGC	NA	False	NA	NA	False	AATAAA	-11	NA	8907157	8904759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8905252_8905341_8905589_8905947
Isoform_82409_337	chr19	-	1966	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	53	2176	-52	-2176	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAGTGTGGTTAGG	NA	False	NA	NA	False	AATAAA	-14	NA	9112947	9089407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
Isoform_82413_19	chr19	-	4144	8	NNC	ENSMUSG00000024654.9	novel	4195	7	NA	NA	22	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	153.473789559106	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGACTTGCTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	9112978	9087236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_9088764_9088787_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
Isoform_82417_63	chr19	-	3078	19	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	2	-60	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	145.134516148908	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876851	9849765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9860555_9860568_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_82419_22	chr19	-	3134	19	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	145.134516148908	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGCTGTGGATATTGT	NA	False	NA	32	True	AATAAA	-13	NA	9876849	9849707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9860555_9860568_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_82437_19	chr19	-	3062	18	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	2	-60	combination_of_known_junctions	FALSE	canonical	3	69	junction_17	97.2156665005635	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876851	9849765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872832_9876702
Isoform_82438_774	chr19	-	3064	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	66	106	4	-60	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876849	9849765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_82439_297	chr19	-	3122	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	66	48	4	-2	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGCTGTGGATATTGT	NA	False	NA	32	True	AATAAA	-13	NA	9876849	9849707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_82440_141	chr19	-	3091	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	39	106	-23	-60	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876876	9849765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_82441_91	chr19	-	3159	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	66	11	4	-11	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATATTGGTCTGCAGC	NA	False	NA	-14	True	NA	NA	NA	9876849	9849670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_82462_567	chr19	-	2908	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	227	15	227	-15	multi-exon	FALSE	canonical	3	359	junction_1	25.8738196920081	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTATTCTCACTTGC	NA	False	NA	-19	True	AATAAA	-10	NA	10078883	10040143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
Isoform_82463_100	chr19	-	3086	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	58	6	58	-6	multi-exon	TRUE	canonical	3	359	junction_1	25.8738196920081	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCACTTGCCTGTAGTTC	9929	False	NA	-10	True	AATAAA	-19	NA	10079052	10040134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
Isoform_82472_2418	chr19	-	2181	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	160	0	-14	0	multi-exon	FALSE	canonical	3	832	junction_1	0	2418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2190	False	NA	NA	False	AATAAA	-14	NA	10181272	10176501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10178462_10181051
Isoform_82481_292	chr19	-	2170	2	FSM	ENSMUSG00000024742.16	ENSMUST00000142241.2	2152	2	-14	-4	-14	0	multi-exon	FALSE	canonical	3	104	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2190	False	NA	NA	False	AATAAA	-14	NA	10181272	10176501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10178462_10181062
Isoform_82483_1125	chr19	-	2074	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	23	3	23	1	multi-exon	FALSE	canonical	3	443	junction_1	0	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAGAATGTGTCTGAAT	2178	False	NA	NA	False	AATAAA	-11	NA	10181284	10176504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10178462_10181167
Isoform_82490_3	chr19	-	3000	7	ISM	ENSMUSG00000036098.16	ENSMUST00000186854.7	1517	13	2557	-2026	2557	-2	3prime_fragment	FALSE	canonical	2	15	junction_6	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCCTCTGACATCTT	NA	False	NA	-2	True	NA	NA	NA	10192335	10185637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123
Isoform_82491_4	chr19	-	3281	10	ISM	ENSMUSG00000036098.16	ENSMUST00000186854.7	1517	13	1299	-2027	1299	-1	3prime_fragment	FALSE	canonical	2	8	junction_8	3.77450838921401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGCCTCTGACATCTTC	NA	False	NA	-1	True	NA	NA	NA	10193593	10185636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192467_10193105_10193175_10193424
Isoform_82492_3	chr19	-	3416	10	ISM	ENSMUSG00000036098.16	ENSMUST00000186854.7	1517	13	1153	-2016	1153	-12	3prime_fragment	FALSE	canonical	2	8	junction_8	3.77450838921401	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCTGCACTTGCCT	NA	False	NA	-12	True	NA	NA	NA	10193739	10185647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192467_10193105_10193175_10193424
Isoform_82494_4	chr19	-	3271	10	ISM	ENSMUSG00000036098.16	ENSMUST00000189897.2	3339	26	24387	-2111	1311	-2	3prime_fragment	FALSE	canonical	2	13	junction_7	2.70801280154532	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCCTCTGACATCTT	NA	False	NA	-2	True	NA	NA	NA	10193581	10185637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424
Isoform_82495_10	chr19	-	5589	26	FSM	ENSMUSG00000036098.16	ENSMUST00000189897.2	3339	26	-145	-2105	-1	-8	multi-exon	FALSE	canonical	2	5	junction_20	4.43693587963585	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGCACTTGCCTCTGA	7141	False	NA	-8	True	NA	NA	NA	10218113	10185643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383_10206472_10217922
Isoform_82497_7	chr19	-	1999	6	NNC	ENSMUSG00000024668.9	novel	2025	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.175535232266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTATTGTTTGATCTA	NA	False	NA	NA	False	AATAAA	-16	NA	10502520	10479005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_10479571_10479595_10480494_10494343_10494454_10494532_10494751_10498312_10498423_10502422
Isoform_82498_8	chr19	-	1955	6	NNC	ENSMUSG00000024668.9	novel	2025	5	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.672808557647	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTTTGATCTACAT	NA	False	NA	NA	False	AATAAA	-19	NA	10502495	10479002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_10479571_10479595_10480494_10494343_10494454_10494532_10494751_10498312_10498401_10502422
Isoform_82499_155	chr19	-	1872	5	NNC	ENSMUSG00000024668.9	novel	2025	5	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.3954448053506	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTTGATCTACATCC	NA	False	NA	NA	False	AATAAA	-21	NA	10502498	10479000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_10479571_10479595_10480494_10494343_10494454_10494532_10494751_10502422
Isoform_82503_3	chr19	-	1404	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-238	1815	-171	-1	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGGCATTGAGGCAAA	NA	False	NA	-5	True	NA	NA	NA	10502717	10479712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
Isoform_82505_15	chr19	-	1788	5	NNC	ENSMUSG00000024668.9	novel	675	5	NA	NA	-25	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.9236535327207	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTATTGTTTGATCT	NA	False	NA	NA	False	AATAAA	-15	NA	10502571	10479006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_10479571_10479595_10480494_10494343_10494454_10494683_10494751_10502422
Isoform_82507_11	chr19	-	1740	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	-43	-700	-13	-3	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATATTATTGTTTGATC	NA	False	NA	NA	False	AATAAA	-14	NA	10502499	10479007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
Isoform_82508_3	chr19	-	1920	5	NNC	ENSMUSG00000024668.9	novel	675	5	NA	NA	-156	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.9236535327207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTATTGTTTGATCTA	NA	False	NA	NA	False	AATAAA	-16	NA	10502702	10479005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_10479571_10479595_10480494_10494343_10494454_10494683_10494751_10502422
Isoform_82510_9	chr19	-	877	6	NIC	ENSMUSG00000024667.13	novel	876	6	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	28.4717403753266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTGGTTGATTTTCTC	NA	False	NA	-5	True	AATAAA	-15	NA	10533102	10527826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_10528184_10528321_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
Isoform_82511_21	chr19	-	1046	5	FSM	ENSMUSG00000024667.13	ENSMUST00000059582.9	999	5	-20	-27	-15	3	multi-exon	FALSE	canonical	3	35	junction_4	20.6079474960511	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGGCTGGTTGATTTTC	NA	False	NA	-7	True	AATAAA	-13	NA	10533135	10527828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
Isoform_82512_33	chr19	-	1034	5	FSM	ENSMUSG00000024667.13	ENSMUST00000154383.2	927	5	-20	-87	-15	-2	multi-exon	FALSE	canonical	3	49	junction_4	15.1224171348366	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTGGTTGATTTTCTC	NA	False	NA	-5	True	AATAAA	-15	NA	10533135	10527826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533076
Isoform_82513_4	chr19	-	1348	5	NIC	ENSMUSG00000024666.7	novel	1260	5	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	67.4884249334654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTGTCTTGGTGTCT	1787	False	NA	-11	True	AATAAA	-8	NA	10554449	10547848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554332
Isoform_82514_20	chr19	-	1560	5	FSM	ENSMUSG00000024666.7	ENSMUST00000235990.2	1260	5	-298	-2	-43	0	multi-exon	FALSE	canonical	3	27	junction_3	58.8175143983491	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1467	False	NA	-4	True	AATAAA	-15	NA	10554769	10547841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554447
Isoform_82518_7	chr19	-	1517	5	FSM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	10	2	4	0	multi-exon	FALSE	canonical	3	12	junction_4	65.3543227338483	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1795	False	NA	-6	True	AATAAA	-13	NA	10554441	10547843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554233
Isoform_82519_39	chr19	-	1428	5	NIC	ENSMUSG00000024666.7	novel	1529	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	52.1464284491278	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1787	False	NA	-4	True	AATAAA	-15	NA	10554449	10547841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554332
Isoform_82521_38	chr19	-	1623	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	-33	0	-33	0	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1477	False	NA	-4	True	AATAAA	-15	NA	10554759	10547841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
Isoform_82523_80	chr19	-	1335	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	255	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1765	False	NA	-4	True	AATAAA	-15	NA	10554471	10547841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
Isoform_82527_3	chr19	-	1885	4	FSM	ENSMUSG00000024666.7	ENSMUST00000236185.2	1593	4	-294	2	-39	-2	multi-exon	FALSE	canonical	3	102	junction_3	28.0158685192676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTTGGTGTCTTCA	1471	False	NA	-8	True	AATAAA	-11	NA	10554765	10547845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10548969_10552200_10552373_10552603_10552876_10554447
Isoform_82530_21	chr19	-	2746	18	NIC	ENSMUSG00000034371.10	novel	2437	18	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_17	12.7406930547585	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	9756	False	NA	-25	True	AATAAA	-15	NA	10582781	10569562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582304
Isoform_82533_4	chr19	-	2409	19	NNC	ENSMUSG00000034371.10	novel	2516	18	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	18.0428160184751	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	9741	False	NA	-25	True	AATAAA	-15	NA	10582796	10569562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582304_10582421_10582772
Isoform_82534_27	chr19	-	2474	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	-37	0	-3	0	multi-exon	FALSE	canonical	3	18	junction_17	12.9229818620786	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTCCCTGTTTACA	9752	False	NA	-23	True	AATAAA	-17	NA	10582785	10569560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
Isoform_82535_39	chr19	-	2436	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	-2	3	-2	0	multi-exon	FALSE	canonical	3	18	junction_17	12.9229818620786	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGACTTTGTCCCTGTTT	9787	False	NA	-26	True	AATAAA	-14	NA	10582750	10569563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
Isoform_82536_81	chr19	-	2293	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236607.2	2516	18	222	1	0	-1	multi-exon	FALSE	canonical	3	13	junction_17	13.858404068355	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	9741	False	NA	-25	True	AATAAA	-15	NA	10582796	10569562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582772
Isoform_82537_6	chr19	-	2458	17	NNC	ENSMUSG00000034371.10	novel	2253	17	NA	NA	1277	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	16.8962828752362	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	NA	False	NA	-25	True	AATAAA	-15	NA	10580345	10569562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10580050
Isoform_82538_4	chr19	-	1275	8	ISM	ENSMUSG00000024738.7	ENSMUST00000025647.7	1417	9	1269	7	15	-7	3prime_fragment	FALSE	canonical	3	9	junction_1	1.72614942479922	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCACTGATACTAACGT	NA	False	NA	NA	False	AATAAA	-13	NA	10654166	10646326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_10646626_10646718_10646818_10646891_10647037_10649151_10649269_10651001_10651202_10652190_10652310_10652407_10652526_10653988
Isoform_82539_4	chr19	-	2175	9	FSM	ENSMUSG00000024670.18	ENSMUST00000025572.8	2173	9	3	-5	3	0	multi-exon	TRUE	canonical	1	1	junction_4	1.11102430216445	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGCGTGTCTTGACAATT	8159	False	NA	NA	False	ATTAAA	-18	NA	10776105	10766704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10767608_10767932_10768035_10768279_10768535_10768745_10768818_10770191_10770309_10771505_10771602_10771927_10772069_10773689_10773753_10775679
Isoform_82541_96	chr19	-	3487	11	FSM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	161	9	-1	3	multi-exon	FALSE	canonical	3	39	junction_8	9.57131129992124	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGTACTGCTGTGACA	NA	False	NA	-8	True	AATAAA	-18	NA	10847143	10835194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
Isoform_82543_24	chr19	-	3492	11	NNC	ENSMUSG00000024736.16	novel	3657	11	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	16.1496129984591	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTACTGCTGTGACACT	NA	False	NA	-6	True	AATAAA	-20	NA	10847143	10835192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841028_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
Isoform_82544_22	chr19	-	3909	10	FSM	ENSMUSG00000024736.16	ENSMUST00000120524.2	3895	10	-11	-3	-11	3	multi-exon	FALSE	canonical	3	39	junction_7	10.088497300281	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGTACTGCTGTGACA	NA	False	NA	-8	True	AATAAA	-18	NA	10847153	10835194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
Isoform_82545_4	chr19	-	3907	10	NNC	ENSMUSG00000024736.16	novel	3895	10	NA	NA	-15	-6	intron_retention	FALSE	canonical	2	11	junction_5	16.983652270476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGCATAGCTGGTACT	NA	False	NA	-17	True	AATAAA	-9	NA	10847157	10835203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841028_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
Isoform_82547_7	chr19	-	2037	4	FSM	ENSMUSG00000034659.15	ENSMUST00000133303.8	839	4	-11	-1187	-11	-3	multi-exon	TRUE	canonical	1	1	junction_3	71.4749373323731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTCTGCTGACAAACT	NA	False	NA	-6	True	AATAAA	-14	NA	10857745	10848026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10857543
Isoform_82548_512	chr19	-	1908	4	FSM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	277	3	7	-3	multi-exon	FALSE	canonical	3	149	junction_2	8.28653526310404	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTCTGCTGACAAACT	NA	False	NA	-6	True	AATAAA	-14	NA	10859088	10848026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10859015
Isoform_82551_49	chr19	-	2094	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	2	907	2	-907	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGACAGGTACACTGA	NA	False	NA	NA	False	AATAAA	-13	NA	10926628	10919751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
Isoform_82557_13	chr19	-	1705	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	-21	1319	-21	-1319	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTTCAGCTGTGAATT	NA	False	NA	-95	True	AAAACA	-7	NA	10926651	10920163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
Isoform_82559_48	chr19	-	2656	12	NIC	ENSMUSG00000041488.17	novel	3068	12	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	185.459046291195	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTGGGTACTAGTTGT	7155	False	NA	-20	True	AATAAA	-18	NA	11796288	11752482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_11753953_11754451_11754535_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
Isoform_82562_11	chr19	-	2555	11	NIC	ENSMUSG00000041488.17	novel	3068	12	NA	NA	18	12	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	192.742937613807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTACTGTTGTTTTTA	7155	False	NA	-7	True	AATAAA	-31	NA	11796288	11752469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_11753953_11754451_11754535_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
Isoform_82567_269	chr19	-	2786	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	18	6	18	-6	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCTCTGGGGCCATC	7155	False	NA	-14	True	AATAAA	-19	NA	11796288	11754854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
Isoform_82569_70	chr19	-	2815	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	-10	5	-10	-5	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTCTGGGGCCATCT	7127	False	NA	-13	True	AATAAA	-20	NA	11796316	11754853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
Isoform_82579_3	chr19	-	5363	9	FSM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	-133	-4	-133	4	multi-exon	TRUE	canonical	3	5	junction_1	4.63680924774785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGTCGTTACTCCTA	8099	False	NA	NA	False	AATAAA	-17	NA	12478951	12443697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_12447074_12450593_12450684_12455489_12455652_12459437_12459591_12460409_12460472_12462627_12462790_12463792_12463855_12469199_12469915_12478370
Isoform_82580_3	chr19	-	4285	2	ISM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	-146	22522	-146	-22522	5prime_fragment	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGGCTCAGCTGTTTAT	8086	False	NA	NA	False	AATAAA	-25	NA	12478964	12466223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_12469915_12478370
Isoform_82583_52	chr19	-	4858	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	673	0	673	0	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTGTTTCCTTTTAA	NA	False	NA	-4	True	AATAAA	-18	NA	12772817	12744383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
Isoform_82584_26	chr19	-	1971	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	646	2914	646	1577	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTCTTTGCATTGT	NA	False	NA	-5	True	AGTAAA	-10	NA	12772844	12747297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
Isoform_82586_23	chr19	-	4896	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	635	0	635	0	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTGTTTCCTTTTAA	NA	False	NA	-4	True	AATAAA	-18	NA	12772855	12744383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
Isoform_82587_5	chr19	-	5882	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	669	-1020	669	1020	multi-exon	TRUE	canonical	3	113	junction_5	14.0003571383019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTATTGTATTAATT	NA	False	NA	5	True	AATAAA	-27	NA	12772821	12743363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
Isoform_82588_18	chr19	-	4926	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	683	-78	683	78	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAACTGGTCTTCCTTG	NA	False	NA	-5	True	AATAAA	-14	NA	12772807	12744305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
Isoform_82599_132	chr19	-	4543	20	FSM	ENSMUSG00000024642.18	ENSMUST00000052011.15	4545	20	2	0	2	0	multi-exon	FALSE	canonical	3	109	junction_14	23.8865044942308	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATTATTTTCTAATT	NA	False	NA	-16	True	ATTAAA	-15	NA	14575413	14425513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
Isoform_82603_8	chr19	-	3988	20	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	839	3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_19	43.7527680169069	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTATTTTCTAATTATT	NA	False	NA	-13	True	ATTAAA	-18	NA	14574576	14425510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574452
Isoform_82607_72	chr19	-	4547	20	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_14	32.1687896093519	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATTATTTTCTAATTA	NA	False	NA	-15	True	ATTAAA	-16	NA	14575413	14425512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
Isoform_82609_6	chr19	-	3987	20	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	844	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_19	48.2595705491096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTTCTAATTATTT	NA	False	NA	-12	True	ATTAAA	-19	NA	14574571	14425509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574452
Isoform_82610_24	chr19	-	4471	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_14	39.6848697728604	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATTATTTTCTAATT	NA	False	NA	-16	True	ATTAAA	-15	NA	14575413	14425513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
Isoform_82631_6445	chr19	-	2089	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	77	451	-52	1	multi-exon	TRUE	canonical	3	2829	junction_2	225.154079188008	6445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCATTGCCTGTGAATT	NA	False	NA	-16	True	ATTAAA	-18	NA	15902346	15882492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
Isoform_82632_516	chr19	-	2114	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	50	453	50	-1	multi-exon	FALSE	canonical	3	2829	junction_2	225.154079188008	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTCATTGCCTGTGAA	NA	False	NA	-18	True	ATTAAA	-16	NA	15902373	15882494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
Isoform_82648_13	chr19	-	2603	16	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	54.2496287749716	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTGAGTGATAAAATA	188	False	NA	NA	False	AATAAA	-17	NA	15962340	15933136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_15933768_15935458_15935526_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_82650_349	chr19	-	2554	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	-2	-4	-2	3	multi-exon	FALSE	canonical	3	141	junction_1	15.9123876785558	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAGTGATAAAATACAG	173	False	NA	NA	False	AATAAA	-20	NA	15962355	15933133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_82652_13	chr19	-	4124	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	-5	-1571	-5	1570	multi-exon	FALSE	canonical	3	141	junction_1	15.9123876785558	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGTGTGGTTTTGTCTT	170	False	NA	NA	False	NA	NA	NA	15962358	15931566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_82653_5	chr19	-	2655	15	NNC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_14	42.1016747933875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	171	False	NA	NA	False	AATAAA	-16	NA	15962357	15933137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961873
Isoform_82654_12	chr19	-	2971	14	FSM	ENSMUSG00000041491.9	ENSMUST00000236749.2	2465	14	-298	-208	-2	0	multi-exon	FALSE	canonical	3	141	junction_1	15.7062532302438	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTGAGTGATAAAATA	173	False	NA	NA	False	AATAAA	-17	NA	15962355	15933136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_82655_5	chr19	-	2438	14	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	45.1929459856724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTGAGTGATAAAATA	157	False	NA	NA	False	AATAAA	-17	NA	15962371	15933136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_82656_39	chr19	-	2398	14	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	44.4826939288933	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTGAGTGATAAAATA	157	False	NA	NA	False	AATAAA	-17	NA	15962371	15933136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_15933768_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_82659_10	chr19	-	10848	72	FSM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	-10	0	-4	0	multi-exon	TRUE	canonical	3	25	junction_58	9.97459578127363	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTCAATGGATATTT	NA	False	NA	-27	True	CATAAA	-16	NA	16758301	16593049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
Isoform_82660_3	chr19	-	12373	70	NNC	ENSMUSG00000046230.12	novel	2939	22	NA	NA	-33	0	intron_retention	TRUE	non_canonical	0	0	junction_1	11.400004053401	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTGGATTTTTTTTT	NA	False	NA	1	True	AATAAA	-15	NA	16758330	16609919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_16610922_16610948_16612958_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
Isoform_82664_41	chr19	-	4595	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	9	2	9	0	multi-exon	FALSE	canonical	3	31	junction_2	7	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTATGTCTGCACACAT	8043	False	NA	0	True	AATAAA	-19	NA	17334022	17303506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_17307853_17310473_17310621_17333920
Isoform_82667_7	chr19	-	3294	21	FSM	ENSMUSG00000024713.17	ENSMUST00000050715.10	5768	21	0	2474	0	2080	multi-exon	FALSE	canonical	0	0	junction_6	1.83303027798234	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAAACTGCAAGCCAC	NA	False	NA	NA	False	ATTAAA	-11	NA	17814996	17538011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_17538194_17541145_17541262_17542073_17542204_17542631_17542730_17545632_17545718_17549787_17549982_17553169_17553273_17558499_17558644_17563373_17563511_17571903_17572093_17573024_17573143_17595014_17595119_17619856_17619958_17632051_17632265_17652784_17652958_17655832_17655922_17689278_17689356_17692121_17692266_17729426_17729541_17770992_17771098_17814318
Isoform_82669_110	chr19	-	1292	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	8	1426	8	55	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGATTCGATGTTACT	NA	False	NA	-2	True	AATAAA	-19	NA	18609145	18558117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
Isoform_82670_492	chr19	-	1267	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-25	1484	9	-3	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGTTTTTGTGCTATC	NA	False	NA	-5	True	AATAAA	-18	NA	18609178	18558175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
Isoform_82684_24	chr19	-	1398	13	FSM	ENSMUSG00000024659.16	ENSMUST00000025561.8	1674	13	274	2	3	0	multi-exon	FALSE	canonical	3	18	junction_4	3.1446603773522	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTGTCATTGTCTC	7279	False	NA	0	True	AATAAA	-21	NA	20368034	20350793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
Isoform_82685_55	chr19	-	1438	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	176	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	6.94422221866655	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	629	False	NA	NA	False	AATAAA	-21	NA	21630164	21574675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
Isoform_82686_13	chr19	-	1573	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	40	1	-19	-1	multi-exon	FALSE	canonical	3	194	junction_1	6.94422221866655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTCTTGTTGTTG	493	False	NA	NA	False	AATAAA	-20	NA	21630300	21574676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
Isoform_82687_7	chr19	-	1331	3	FSM	ENSMUSG00000035171.10	ENSMUST00000179553.2	942	3	0	-389	0	0	multi-exon	FALSE	canonical	3	15	junction_2	89.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	629	False	NA	NA	False	AATAAA	-21	NA	21630164	21574675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_21575699_21576118_21576233_21629970
Isoform_82688_37	chr19	-	1821	3	FSM	ENSMUSG00000035171.10	ENSMUST00000179768.8	962	3	154	-1013	30	0	multi-exon	FALSE	canonical	3	207	junction_2	1.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	666	False	NA	NA	False	AATAAA	-21	NA	21630127	21574675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_21576233_21596472_21596580_21629970
Isoform_82689_3	chr19	-	1981	3	FSM	ENSMUSG00000035171.10	ENSMUST00000179768.8	962	3	-9	-1010	-9	-3	multi-exon	FALSE	canonical	3	207	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGTGTCTTGTTGT	503	False	NA	NA	False	AATAAA	-18	NA	21630290	21574678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_21576233_21596472_21596580_21629970
Isoform_8269_4	chr10	+	1856	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	93	0	93	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTAAAGGTCTCTTTTT	NA	False	NA	18	True	ATTAAA	-18	NA	111342239	111344506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111343510_111343920
Isoform_82690_4	chr19	-	1751	2	FSM	ENSMUSG00000035171.10	ENSMUST00000178523.2	629	2	117	-1239	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	629	False	NA	NA	False	AATAAA	-21	NA	21630164	21574675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_21576233_21629970
Isoform_82693_46	chr19	-	3456	25	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	27	2	combination_of_known_junctions	FALSE	canonical	2	93	junction_7	96.5628753139056	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAAGATTGGTTATTT	NA	False	NA	-6	True	AATAAA	-19	NA	23251234	23186096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82694_36	chr19	-	5692	25	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	2	93	junction_7	96.5628753139056	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTATTTAAGATGAGAG	NA	False	NA	-13	True	AATAAA	-21	NA	23251190	23183816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82698_61	chr19	-	3416	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	21	11	21	1	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAGATTGGTTATT	NA	False	NA	-7	True	AATAAA	-18	NA	23251240	23186097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82699_60	chr19	-	5676	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	42	-2270	-37	-2	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTATTTAAGATGAGAG	NA	False	NA	-13	True	AATAAA	-21	NA	23251219	23183816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_827_1760	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	3871	junction_1	2708.37786137754	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
Isoform_82702_19	chr19	-	5721	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	-4	-2269	-4	-3	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTTATTTAAGATGAGA	NA	False	NA	-14	True	AATAAA	-20	NA	23251265	23183817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82703_33	chr19	-	3451	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	-14	11	-14	1	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAGATTGGTTATT	NA	False	NA	-7	True	AATAAA	-18	NA	23251275	23186097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82708_30	chr19	-	3461	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	-60	2282	19	2	multi-exon	FALSE	canonical	2	93	junction_7	95.2415696910872	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAAGATTGGTTATTT	NA	False	NA	-6	True	AATAAA	-19	NA	23251242	23186096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82709_30	chr19	-	5739	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	-58	2	21	-2	multi-exon	FALSE	canonical	2	93	junction_7	95.2415696910872	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTATTTAAGATGAGAG	NA	False	NA	-13	True	AATAAA	-21	NA	23251240	23183816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82716_20	chr19	-	5270	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-20	-467	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAATAACTAAATTT	NA	False	NA	-1	True	AATAAA	-26	NA	23251281	23184281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82717_87	chr19	-	3414	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	21	2	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAAGATTGGTTATTT	NA	False	NA	-6	True	AATAAA	-19	NA	23251240	23186096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82718_60	chr19	-	5642	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGTTATTTAAGATGAG	NA	False	NA	-15	True	AATAAA	-19	NA	23251190	23183818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82719_48	chr19	-	5213	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	27	-477	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTTAAAAATATTTTTAAT	NA	False	NA	-11	True	AATAAA	-16	NA	23251234	23184291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_8272_4	chr10	+	1616	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	146	187	146	-187	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTTTATTTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	111342292	111344319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111343510_111343920
Isoform_82720_19	chr19	-	5745	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTATTTAAGATGAGAGTA	NA	False	NA	-11	True	AATAAA	-23	NA	23251289	23183814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_82723_62	chr19	-	2542	11	FSM	ENSMUSG00000071604.6	ENSMUST00000096164.6	2548	11	6	0	6	0	multi-exon	FALSE	canonical	3	34	junction_3	7.73627817493658	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTAGTGTTTGTG	NA	False	NA	-4	True	AATAAA	-24	NA	24008377	23950113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_23950996_23952724_23953018_23955325_23955479_23956753_23956833_23956949_23957080_23962072_23962207_23963772_23963881_23965810_23965940_23972144_23972256_23998969_23999027_24007911
Isoform_82725_10	chr19	-	2763	11	FSM	ENSMUSG00000071604.6	ENSMUST00000096164.6	2548	11	-224	9	-224	-9	multi-exon	FALSE	canonical	3	34	junction_3	7.73627817493658	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGGACTCCATGTGTA	NA	False	NA	-13	True	AATAAA	-15	NA	24008607	23950122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_23950996_23952724_23953018_23955325_23955479_23956753_23956833_23956949_23957080_23962072_23962207_23963772_23963881_23965810_23965940_23972144_23972256_23998969_23999027_24007911
Isoform_82726_5	chr19	-	2392	11	NNC	ENSMUSG00000071604.6	novel	2548	11	NA	NA	8545	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	16.5435788147547	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGACTCCATGTGTAGT	7506	False	NA	-11	True	AATAAA	-17	NA	23999838	23950120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_23950996_23952724_23953018_23955325_23955479_23956753_23956833_23956949_23957080_23962072_23962207_23963772_23963881_23965810_23965940_23972144_23972256_23998969_23999027_23999515
Isoform_8273_740	chr10	+	2592	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	122	2309	-7	-771	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTGTTTATGATGAAG	NA	False	NA	8	True	ATTAAA	-19	NA	111808690	111822028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
Isoform_8274_32	chr10	+	2714	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	-2	2311	-2	-773	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGTTTGTTTATGATGA	NA	False	NA	6	True	ATTAAA	-44	NA	111808566	111822026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
Isoform_82751_527	chr19	-	4725	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	0	-5	combination_of_known_junctions	TRUE	canonical	0	0	junction_23	82.6461699898347	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACATAAAAATGTGTG	NA	False	NA	NA	False	ATTAAA	-11	NA	24202390	24071873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
Isoform_82754_50	chr19	-	4787	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-58	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	82.6461699898347	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACATAAAAATGTGTG	NA	False	NA	NA	False	ATTAAA	-11	NA	24202452	24071873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
Isoform_82759_21	chr19	-	4604	23	FSM	ENSMUSG00000024812.12	ENSMUST00000099558.5	4591	23	0	-13	0	-5	multi-exon	FALSE	canonical	0	0	junction_22	84.2977309185516	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACATAAAAATGTGTG	NA	False	NA	NA	False	ATTAAA	-11	NA	24202390	24071873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24202214
Isoform_82778_32	chr19	-	2651	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	19	-1556	-18	1556	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTGTCCCTTTGTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	24257950	24237260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
Isoform_82781_142	chr19	-	793	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	18	303	18	106	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCCCGGACCTGGCT	NA	False	NA	-7	True	AAAAAG	-15	NA	24257951	24239119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
Isoform_82786_50	chr19	-	2964	15	FSM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	-392	1	-392	-1	multi-exon	FALSE	canonical	3	28	junction_9	5.473498303048	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGTCATACATTGATT	NA	False	NA	-1	True	AATAAA	-15	NA	24533628	24272158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
Isoform_82789_3	chr19	-	2847	14	NIC	ENSMUSG00000024867.15	novel	2573	15	NA	NA	-389	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.5783924444472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTCATACATTGATTC	NA	False	NA	0	True	AATAAA	-16	NA	24533625	24272157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_24272919_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
Isoform_82790_3	chr19	-	3149	7	ISM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	7	81818	7	19549	5prime_fragment	FALSE	canonical	3	28	junction_1	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGGAAACTTGTTCAGA	NA	False	NA	NA	False	AAGAAA	-4	NA	24533229	24353975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
Isoform_82793_5	chr19	-	1480	15	NIC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	1	-515	combination_of_known_junctions	FALSE	canonical	3	7	junction_14	49.7256247331498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATCCTCTGGAGGT	NA	False	NA	-36	True	AGTAAA	-28	NA	24938964	24897794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938680
Isoform_82794_10	chr19	-	2231	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	-23	-279	-14	279	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAACTGTGTTAATTT	NA	False	NA	-9	True	ATTAAA	-13	NA	24938988	24897000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
Isoform_82795_24	chr19	-	2213	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	1	-285	1	285	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTTAATTTTCTGTA	NA	False	NA	-3	True	ATTAAA	-19	NA	24938964	24896994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
Isoform_82797_116	chr19	-	1414	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	1	514	1	-514	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATCCTCTGGAGGTT	NA	False	NA	-35	True	AGTAAA	-29	NA	24938964	24897793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
Isoform_828_341	SIRV5	+	551	2	FSM	SIRV5A	SIRV506	552	2	1	0	1	0	multi-exon	FALSE	canonical	3	11478	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1009	2398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_1150_1987
Isoform_82803_3	chr19	-	1485	14	NIC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	21	-516	intron_retention	FALSE	canonical	3	171	junction_13	17.8885438199983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATATCCTCTGGAGG	NA	False	NA	-37	True	AGTAAA	-27	NA	24938944	24897795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_24898067_24898384_24898515_24899960_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
Isoform_8282_11	chr10	+	4908	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	114	1	3	-1	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGCTCTTGTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	111808682	111824336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
Isoform_82826_1345	chr19	-	2146	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-37	1362	-37	1	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGACCTTTGGTTTAAT	NA	False	NA	-16	True	TATAAA	-11	NA	27407262	27367459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
Isoform_82827_94	chr19	-	3477	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-13	7	-13	-7	multi-exon	TRUE	canonical	3	1256	junction_17	93.320929312512	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTTCTATTTGTTTGT	NA	False	NA	-7	True	NA	NA	NA	27407238	27366104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
Isoform_82842_3	chr19	-	7380	11	FSM	ENSMUSG00000052942.14	ENSMUST00000162022.8	7514	11	-167	301	-167	-301	multi-exon	FALSE	canonical	0	0	junction_9	5.0950956811428	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGGCGTTGTTTGTTTGT	NA	False	NA	NA	False	AAAACA	-8	NA	28657644	28236551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28643152_28643637_28656995
Isoform_82844_48	chr19	-	2810	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	0	-1	0	1	multi-exon	FALSE	canonical	3	26	junction_1	7.58287544405155	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTGTCTCCATGTTG	NA	False	NA	0	True	AATAAA	-17	NA	29025361	28998231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
Isoform_82847_14	chr19	-	6033	4	NIC	ENSMUSG00000024782.8	novel	2809	5	NA	NA	40	-1	intron_retention	FALSE	canonical	3	29	junction_3	6.37704215656966	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCGGGCTGTCTCCATGT	NA	False	NA	-2	True	AATAAA	-15	NA	29025321	28998233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_29003731_29004570_29004744_29015271_29015392_29025078
Isoform_82849_44	chr19	-	814	6	FSM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	104	102	7	4	multi-exon	FALSE	canonical	3	35	junction_3	10.1390334845093	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGGCAGTATTCTAAA	NA	False	NA	-101	True	AATAAA	-19	NA	29339266	29326100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29339196
Isoform_82851_16	chr19	-	684	5	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	6	4	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	17.2825779327044	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGGCAGTATTCTAAA	NA	False	NA	-101	True	AATAAA	-19	NA	29339267	29326100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29338216_29338328_29339196
Isoform_82852_4	chr19	-	774	5	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	17.2825779327044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAATGTCCTGCTGCTT	NA	False	NA	0	True	AATAAA	-20	NA	29339256	29325999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29338216_29338328_29339196
Isoform_82853_3	chr19	-	572	4	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	7	4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	18.263503375737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGGCAGTATTCTAAA	NA	False	NA	-101	True	AATAAA	-19	NA	29339266	29326100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29339196
Isoform_82854_4	chr19	-	604	4	FSM	ENSMUSG00000016495.13	ENSMUST00000152936.8	604	4	2	-2	2	2	multi-exon	FALSE	canonical	2	8	junction_1	25.1042271783503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTCTCGTGTGTATG	NA	False	NA	-75	True	AATAAA	-45	NA	29339271	29326074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_29326406_29335716_29335804_29338216_29338328_29339196
Isoform_82860_615	chr19	-	5055	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	23	1980	-2	8	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGGATCTTTTACAA	NA	False	NA	-9	True	AATAAA	-21	NA	29625792	29587593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
Isoform_82862_82	chr19	-	5342	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-7	320	intron_retention	FALSE	non_canonical	0	0	junction_1	89.4715348899054	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGAAGATCCGGAGTAT	NA	False	NA	-6	True	AATAAA	-17	NA	29625797	29587281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_29587458_29587487_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
Isoform_82871_7	chr19	-	8555	8	FSM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	-1032	1	-550	-1	multi-exon	FALSE	canonical	3	13	junction_4	4.32364170012044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCATGATTTCATTACT	3370	False	NA	-1	True	AATAAA	-22	NA	29783939	29691802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
Isoform_82905_3470	chr19	-	3762	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	3	2	3	-2	multi-exon	FALSE	canonical	1	455	junction_4	183.478351735445	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152826	30075848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
Isoform_82906_539	chr19	-	3807	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	-41	1	-41	-1	multi-exon	FALSE	canonical	1	455	junction_4	183.478351735445	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGAATTTCCCATTTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	30152870	30075847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
Isoform_8291_92	chr10	+	6955	35	FSM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	2	0	2	0	multi-exon	FALSE	canonical	3	77	junction_22	26.4839345439331	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATAGTGGGACTGTTTT	NA	False	NA	9	True	AATAAA	-21	NA	115220865	115268677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
Isoform_82918_126	chr19	-	3241	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	19	2	19	0	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	8038	False	NA	-4	True	AATAAA	-15	NA	32188394	32100129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
Isoform_82919_6	chr19	-	2023	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	-18	1257	-18	160	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATACTTTTCATATCT	8001	False	NA	NA	False	AATAAA	-19	NA	32188431	32101384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
Isoform_82922_42	chr19	-	3625	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	35	5	-14	-2	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGCTATTATATT	8366	False	NA	-6	True	AATAAA	-13	NA	32365877	32100131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
Isoform_82928_71	chr19	-	3366	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3448	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	60.6538447988987	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGCTATTATATT	4128	False	NA	-6	True	AATAAA	-13	NA	32219674	32100131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219462
Isoform_82935_7	chr19	-	3329	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3448	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	68.5362839831736	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTATTATATTGTGT	4128	False	NA	-2	True	AATAAA	-17	NA	32219674	32100127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219503
Isoform_82936_7	chr19	-	3361	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3480	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	72.004050811974	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGCTATTATATT	4096	False	NA	-6	True	AATAAA	-13	NA	32219706	32100131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219499
Isoform_82938_5	chr19	-	2404	5	NIC	ENSMUSG00000040451.19	novel	3262	6	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	81.1464725049709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTATTATATTGTGT	8037	False	NA	-2	True	AATAAA	-17	NA	32188395	32100127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32188227
Isoform_82939_4	chr19	-	2278	2	ISM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	19	35525	19	3	5prime_fragment	FALSE	canonical	3	81	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAAAAAG	8038	False	NA	NA	False	AATAGA	-36	NA	32188394	32135652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_32137764_32188227
Isoform_82948_395	chr19	-	2832	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	18	921	7	263	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGCACTGAATTTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	32689713	32649958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
Isoform_8295_8	chr10	+	2786	9	NNC	ENSMUSG00000020183.12	novel	5195	9	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.3418742493994	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATTTTGTGTAAATGCG	NA	False	NA	NA	False	NA	NA	NA	117465404	117520848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_117465433_117465625_117465793_117495676_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519182
Isoform_82950_54	chr19	-	2888	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	-42	925	-42	259	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATTACAGCACTGAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	32689773	32649962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
Isoform_82956_13	chr19	-	3584	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	18	169	7	-169	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTACGGGTTTGATTCA	NA	False	NA	-1	True	AATAAA	-21	NA	32689713	32649206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
Isoform_8296_4	chr10	+	2333	3	FSM	ENSMUSG00000020212.15	ENSMUST00000219087.2	1318	3	-88	-927	-6	536	multi-exon	FALSE	canonical	3	115	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGGGGTGTTCTTAGA	NA	False	NA	NA	False	AATAAA	-21	NA	117977730	117984580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_117977868_117978754_117978870_117982499
Isoform_82962_18	chr19	-	1617	7	FSM	ENSMUSG00000071573.15	ENSMUST00000096114.13	1597	7	-19	-1	11	1	multi-exon	FALSE	canonical	2	11	junction_4	3.8151743807532	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCGTTTTATAGCCTCA	NA	False	NA	NA	False	AATAAA	-16	NA	33369684	33115145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_33115675_33145721_33145898_33179874_33180049_33359766_33359926_33367316_33367460_33368479_33368586_33369354
Isoform_82963_61	chr19	-	2748	11	FSM	ENSMUSG00000024766.16	ENSMUST00000112508.9	2839	11	87	4	87	-1	multi-exon	FALSE	canonical	3	39	junction_5	12.3109707172099	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTTTCTGTTTCTTAA	NA	False	NA	-5	True	NA	NA	NA	33567621	33532563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
Isoform_82965_8	chr19	-	2604	10	NIC	ENSMUSG00000024766.16	novel	2839	11	NA	NA	93	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	21.3148067702788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTTTTCTGTTTCTTA	NA	False	NA	-6	True	NA	NA	NA	33567615	33532564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
Isoform_82966_3	chr19	-	2313	8	NIC	ENSMUSG00000024766.16	novel	2839	11	NA	NA	76	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	23.8806556502478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTTTCTGTTTCTTAA	NA	False	NA	-5	True	NA	NA	NA	33567632	33532563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33560446_33560565_33562269_33562376_33565600_33565744_33567290
Isoform_82968_6	chr19	-	2958	10	FSM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	7	0	7	0	multi-exon	FALSE	canonical	0	0	junction_9	13.9283882771841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCGGTGTGGTGTTTGC	5922	False	NA	-2	True	AATAAA	-20	NA	34504867	34469717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502243_34504765
Isoform_82969_65	chr19	-	2962	10	FSM	ENSMUSG00000024781.17	ENSMUST00000049572.15	2969	10	7	0	7	0	multi-exon	FALSE	canonical	3	30	junction_9	6.37704215656966	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCGGTGTGGTGTTTGC	5922	False	NA	-2	True	AATAAA	-20	NA	34504867	34469717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502247_34504765
Isoform_82983_123	chr19	-	3136	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	324	3954	324	0	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	NA	False	NA	-12	True	AATAAA	-18	NA	34856531	34788293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
Isoform_8299_67	chr10	+	3075	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	0	-1	0	1	multi-exon	FALSE	canonical	3	66	junction_4	15.3152281412244	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATGCTTCTGTTTTCC	NA	False	NA	12	True	ATTAAA	-15	NA	117977736	118004903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
Isoform_82991_20	chr19	-	3417	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	43	3954	43	0	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	NA	False	NA	-12	True	AATAAA	-18	NA	34856812	34788293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
Isoform_82992_4	chr19	-	4812	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	149	2453	149	1501	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTTTTTTTTTTAA	NA	False	NA	NA	False	ATTAAA	-14	NA	34856706	34786792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
Isoform_82993_11	chr19	-	4627	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	327	2460	327	1494	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTGTTTGTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	34856528	34786799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
Isoform_82994_4	chr19	-	2961	6	NIC	ENSMUSG00000033610.17	novel	7414	7	NA	NA	322	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	44.4639179560236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	NA	False	NA	-12	True	AATAAA	-18	NA	34856533	34788293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_34789788_34791091_34791218_34798499_34798624_34804519_34804774_34818156_34818510_34855923
Isoform_82995_9	chr19	-	2728	2	FSM	ENSMUSG00000067279.4	ENSMUST00000087321.4	2725	2	-8	5	-8	-5	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCGAGAATGTTTTC	NA	False	NA	-4	True	AATAAA	-12	NA	36714061	36709135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_36711755_36713952
Isoform_82996_6	chr19	-	5801	10	NIC	ENSMUSG00000039652.17	novel	2411	10	NA	NA	4	-1	combination_of_known_junctions	TRUE	canonical	2	4	junction_9	2.19988776369148	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGATCTCAACAAGCCTT	9209	False	NA	-1	True	AATAAA	-22	NA	37184857	36998691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37116530_37116622_37151366_37152386_37184693
Isoform_83_55	ERCC-00062	+	1005	1	FSM	ERCC-00062A	DQ516786	1007	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	2	1007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00062_+_0_1000
Isoform_83013_294	chr19	-	3294	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-75	1840	-75	-153	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATGTAGAATATTTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	37340085	37247981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
Isoform_83014_303	chr19	-	5105	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-46	0	-46	0	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340056	37246141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
Isoform_83016_127	chr19	-	5134	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-75	0	-75	0	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340085	37246141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
Isoform_83020_27	chr19	-	3366	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-46	-154	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_24	212.273385990802	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340056	37247982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
Isoform_83021_12	chr19	-	5207	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_24	212.273385990802	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340056	37246141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
Isoform_83022_13	chr19	-	5174	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	3	46	junction_24	212.273385990802	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340023	37246141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
Isoform_8303_5	chr10	+	3057	13	FSM	ENSMUSG00000020212.15	ENSMUST00000164077.9	2922	13	-133	-2	-20	2	multi-exon	FALSE	canonical	2	6	junction_12	29.3295452099452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977695	118004904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
Isoform_83031_9	chr19	-	4693	23	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	175.242830343432	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340085	37246141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
Isoform_83035_92	chr19	-	6733	54	FSM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	-22	-78	-15	-4	multi-exon	TRUE	canonical	3	86	junction_16	23.3368693179296	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8882	False	NA	-5	True	AATAAA	-16	NA	38031821	37887679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37915443_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
Isoform_83037_3	chr19	-	6955	54	FSM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	-244	-78	-18	-4	multi-exon	FALSE	canonical	3	86	junction_16	23.3368693179296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8660	False	NA	-5	True	AATAAA	-16	NA	38032043	37887679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37915443_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
Isoform_83038_9	chr19	-	6747	53	NIC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	30.1745109234177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8856	False	NA	-5	True	AATAAA	-16	NA	38031847	37887679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
Isoform_8304_6	chr10	+	3065	14	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	28.3183508362129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATGCTTCTGTTTTCC	NA	False	NA	12	True	ATTAAA	-15	NA	117977713	118004903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986726_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
Isoform_83040_4	chr19	-	3666	32	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	-40	38437	8	9979	5prime_fragment	FALSE	canonical	3	104	junction_6	13.0618475968402	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGACTCTACTGGTATGC	8864	False	NA	NA	False	AATAAA	-13	NA	38031839	37926194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
Isoform_83042_12	chr19	-	964	6	FSM	ENSMUSG00000024990.14	ENSMUST00000112335.4	937	6	-24	-3	-24	2	multi-exon	FALSE	canonical	3	6	junction_5	4.31740662898458	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTATGAGTTGAAGACTT	5185	False	NA	-2	True	ATTAAA	-16	NA	38113300	38105074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_38105358_38106719_38106933_38112476_38112584_38112743_38112881_38112966_38113096_38113205
Isoform_83044_12	chr19	-	3430	13	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	20	0	20	0	intron_retention	FALSE	canonical	3	295	junction_2	36.707931325835	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	38212566	38176928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284
Isoform_83045_157	chr19	-	1392	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	11	-1	11	1	multi-exon	TRUE	canonical	3	295	junction_2	36.3583414649629	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGAGTCTTTCCTT	NA	False	NA	-6	True	AATAAA	-21	NA	38212575	38176927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
Isoform_83046_50	chr19	-	1414	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	-12	0	6	0	multi-exon	FALSE	canonical	3	295	junction_2	36.3583414649629	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	38212598	38176928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
Isoform_83049_24	chr19	-	937	9	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	20	16060	20	2	5prime_fragment	FALSE	canonical	3	315	junction_8	31.196954979613	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTTAGCATTATGGAA	NA	False	NA	NA	False	AATAAA	-12	NA	38212566	38192988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
Isoform_8305_51	chr10	+	2940	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	21.2053452380919	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATGCTTCTGTTTTCC	NA	False	NA	12	True	ATTAAA	-15	NA	117977736	118004903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
Isoform_83052_278	chr19	-	2941	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	31	1005	31	-1005	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCATGGTTTTTTTTT	2319	False	NA	-7	True	AATAAA	-22	NA	38807650	38777576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
Isoform_83054_185	chr19	-	3946	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	31	0	31	0	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTAGTCTTACGAGGTT	2319	False	NA	NA	False	AATAAA	-17	NA	38807650	38776571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
Isoform_83055_13	chr19	-	3428	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	5	544	5	-544	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGTTCATTGGCTCT	2293	False	NA	NA	False	GATAAA	-14	NA	38807676	38777115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
Isoform_83062_140	chr19	-	1449	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	56	1066	56	124	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACCTCTTAGTTGAC	NA	False	NA	-18	True	AATAAA	-18	NA	40260004	40210682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
Isoform_83063_170	chr19	-	1414	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	89	1068	89	122	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGACCTCTTAGTTG	NA	False	NA	-20	True	AATAAA	-16	NA	40259971	40210684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
Isoform_83064_8	chr19	-	1575	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	-76	1072	-76	118	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTGTGACCTCTTA	NA	False	NA	-24	True	AATAAA	-12	NA	40260136	40210688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
Isoform_83065_10	chr19	-	2622	24	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	19.5313716914923	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGT	9869	False	NA	NA	False	NA	NA	NA	40502214	40283213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_83066_12	chr19	-	5323	24	NIC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	-1	2713	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	19.5313716914923	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9898	False	NA	-1	True	AATAAA	-23	NA	40502185	40280483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_83067_9	chr19	-	2601	23	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	20.7997139204739	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGT	9860	False	NA	NA	False	NA	NA	NA	40502223	40283213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_83068_7	chr19	-	5311	23	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-11	2710	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	20.7997139204739	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTGTGTTCTCTTCC	9877	False	NA	-4	True	AATAAA	-20	NA	40502206	40280486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_83069_3	chr19	-	5434	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-14	2701	combination_of_known_junctions	FALSE	canonical	2	4	junction_18	20.5163957671444	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCGTGGCACCTCTGTG	9874	False	NA	-13	True	AATAAA	-11	NA	40502209	40280495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365248_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_83070_7	chr19	-	2581	23	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	16.9725105892581	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGT	9850	False	NA	NA	False	NA	NA	NA	40502233	40283213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_83072_4	chr19	-	5293	23	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	7	2712	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	16.9725105892581	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9867	False	NA	-2	True	AATAAA	-22	NA	40502216	40280484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_83073_3	chr19	-	5450	24	NIC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	10	2710	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	22.0621222930981	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTGTGTTCTCTTCC	9870	False	NA	-4	True	AATAAA	-20	NA	40502213	40280486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365248_40365427_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_83074_7	chr19	-	2551	22	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	18.3974759187614	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGT	9850	False	NA	NA	False	NA	NA	NA	40502233	40283213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_83075_5	chr19	-	5265	22	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	6	2713	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	18.3974759187614	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9866	False	NA	-1	True	AATAAA	-23	NA	40502217	40280483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_8309_8	chr10	+	2899	12	NIC	ENSMUSG00000020212.15	novel	2922	13	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	33.7594798440207	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATGCTTCTGTTTTCC	NA	False	NA	12	True	ATTAAA	-15	NA	117977717	118004903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
Isoform_83097_2016	chr19	-	3443	19	FSM	ENSMUSG00000025007.14	ENSMUST00000025979.13	3527	19	83	1	2	-1	multi-exon	FALSE	canonical	3	945	junction_12	98.5252364738204	2016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576824	40538701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
Isoform_8310_4	chr10	+	2977	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	27.735231305247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977718	118004902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_117977868_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
Isoform_83100_70	chr19	-	3378	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_17	265.434357090177	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576824	40538700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40576753
Isoform_83103_423	chr19	-	3438	19	FSM	ENSMUSG00000025007.14	ENSMUST00000176939.8	3427	19	-11	0	2	0	multi-exon	FALSE	canonical	3	185	junction_12	241.939820085925	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576824	40538700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
Isoform_83111_53	chr19	-	2739	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	2	2	2	-2	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTTGACTTTTTTTCT	NA	False	NA	-3	True	CATAAA	-15	NA	40600675	40584891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
Isoform_83114_3	chr19	-	3571	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	0	-828	0	828	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTAAGCTCCCAAATTGT	NA	False	NA	NA	False	NA	NA	NA	40600677	40584061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
Isoform_83115_4	chr19	-	1705	12	FSM	ENSMUSG00000025008.16	ENSMUST00000135795.8	1686	12	-18	-1	12	1	multi-exon	FALSE	canonical	3	33	junction_8	4.71501908359634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTTCTCAACCCATGG	NA	False	NA	NA	False	AATAAA	-16	NA	40600665	40593540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
Isoform_83116_9	chr19	-	577	3	NNC	ENSMUSG00000061132.14	novel	1701	17	NA	NA	58684	-7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	6.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAACAGGTGTGATGCA	NA	False	NA	NA	False	AATAAA	-9	NA	40923907	40917377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_40917737_40922870_40923027_40923845
Isoform_8312_3	chr10	+	5772	24	ISM	ENSMUSG00000034813.20	ENSMUST00000147356.9	4145	25	-281	10129	-281	-3	5prime_fragment	FALSE	canonical	0	0	junction_1	2.635370862729	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCCAAAATAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	119289453	119913036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_119290328_119733619_119733701_119765805_119765942_119767148_119767295_119774148_119774233_119778766_119778843_119780930_119781077_119811774_119811923_119814342_119814513_119821378_119821535_119822236_119822390_119835656_119835844_119836430_119836577_119846110_119846192_119853977_119854048_119855865_119856012_119871255_119871401_119874195_119874336_119874503_119874699_119885255_119885413_119885909_119886022_119890737_119890972_119908535_119908683_119911194
Isoform_83127_960	chr19	-	3200	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-33	3	-16	-3	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGTGACAGTAG	NA	False	NA	-32	True	AATAAA	-12	NA	41252452	41202233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
Isoform_83128_399	chr19	-	3231	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-64	3	-47	-3	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGTGACAGTAG	NA	False	NA	-32	True	AATAAA	-12	NA	41252483	41202233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
Isoform_8313_4	chr10	+	2293	3	FSM	ENSMUSG00000020225.11	ENSMUST00000134797.8	486	3	-6	-1801	-6	1801	multi-exon	FALSE	canonical	3	595	junction_1	20.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	120044678	120055423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_120044848_120051445_120051555_120053408
Isoform_83130_104	chr19	-	6133	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-16	-2947	1	-1	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCTTGCTTTCTTTCCT	NA	False	NA	-2	True	AATAAA	-19	NA	41252435	41199283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
Isoform_83142_40	chr19	-	6168	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-49	-2949	-32	1	multi-exon	TRUE	canonical	3	1017	junction_13	71.1689926176006	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGCTTTCTTTCCTTT	NA	False	NA	0	True	AATAAA	-21	NA	41252468	41199281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
Isoform_83147_13	chr19	-	3035	6	ISM	ENSMUSG00000025017.11	ENSMUST00000059672.9	4482	17	88187	-15	88187	15	3prime_fragment	FALSE	canonical	2	5	junction_4	1.6	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAGTGCTTTTTGAGGA	NA	False	NA	NA	False	AGTAAA	-6	NA	41285348	41260800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_41262793_41270309_41270447_41271518_41271590_41275908_41276065_41281191_41281265_41284742
Isoform_8315_349	chr10	+	885	7	FSM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	12	7	12	-7	multi-exon	FALSE	canonical	3	514	junction_6	43.3628104870214	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCATTCTGTGTTCTTC	NA	False	NA	24	True	ATTAAA	-36	NA	120044666	120060815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
Isoform_83150_44	chr19	-	5053	12	FSM	ENSMUSG00000025154.16	ENSMUST00000177495.2	1652	12	2	-3403	2	-3	multi-exon	FALSE	canonical	3	21	junction_5	104.114844409653	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGGGTTCTGACTG	4529	False	NA	NA	False	ATTAAA	-14	NA	41790484	41755029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769744_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
Isoform_83155_689	chr19	-	5099	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	2	2	2	-2	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGGGTTCTGACTGG	4529	False	NA	NA	False	ATTAAA	-15	NA	41790484	41755028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
Isoform_83159_12	chr19	-	5029	11	NIC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	112.434380862795	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4520	False	NA	NA	False	ATTAAA	-17	NA	41790493	41755026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41780185_41780452_41790410
Isoform_83160_15	chr19	-	5021	11	FSM	ENSMUSG00000025154.16	ENSMUST00000163265.9	1812	11	2	-3211	2	-1	multi-exon	FALSE	canonical	3	6	junction_1	113.148398132718	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTCTGACTGGT	4529	False	NA	NA	False	ATTAAA	-16	NA	41790484	41755027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41758636_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
Isoform_83179_1072	chr19	-	4341	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	5	-6	5	6	multi-exon	TRUE	canonical	3	269	junction_16	39.9184430265499	1072	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGGCTTGGCCCCTTC	NA	False	NA	-2	True	AATAAA	-26	NA	41884607	41851283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
Isoform_83185_7	chr19	-	1144	7	ISM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-5	-34	-3	34	intron_retention	FALSE	canonical	3	831	junction_4	54.234060638434	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTCTCTCTCTCTCTTC	NA	False	NA	1	True	NA	NA	NA	41921740	41911970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487
Isoform_83187_378	chr19	-	1030	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-5	-7	-3	7	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATTCTTTTCATTTG	NA	False	NA	-26	True	TATAAA	-29	NA	41921740	41911997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
Isoform_83190_87	chr19	-	1621	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-4	-599	-2	599	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTTGTGCCTGTGGG	NA	False	NA	0	True	AATAAA	-30	NA	41921739	41911405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
Isoform_83194_8	chr19	-	1059	8	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	317.627107772364	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGGAAAAAATTCTTTT	NA	False	NA	-32	True	TATAAA	-23	NA	41921736	41912003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921448_41921604_41921690
Isoform_83196_7	chr19	-	1519	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-3	585	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	328.565569305935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATGTTTAGTGAAAACT	NA	False	NA	-14	True	AATAAA	-16	NA	41921740	41911419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41919794_41919870_41921487_41921604_41921690
Isoform_832_1925	SIRV5	+	2084	17	FSM	SIRV5A	SIRV508	2085	17	1	0	1	0	multi-exon	FALSE	canonical	3	2297	junction_10	2773.74385702339	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1009	10991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
Isoform_83200_7	chr19	-	2497	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-15	3	intron_retention	FALSE	canonical	3	822	junction_6	56.9524655597397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGAAAAAATTCTTTTCA	NA	False	NA	-30	True	TATAAA	-25	NA	41921752	41912001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41916553_41919794_41919870_41921487_41921604_41921690
Isoform_83208_286	chr19	-	3466	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	137	junction_15	29.8713723971445	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969574	41932640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
Isoform_83209_8	chr19	-	3804	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-1	338	combination_of_known_junctions	FALSE	canonical	3	137	junction_15	29.8713723971445	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCCACACTGCATCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	41969577	41932305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
Isoform_8321_70	chr10	+	1138	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	15	511	15	0	multi-exon	FALSE	canonical	3	990	junction_2	137	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTTTGACATTT	NA	False	NA	8	True	AATAAA	-17	NA	120062989	120067976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_120063029_120063878_120064109_120067107
Isoform_83210_7	chr19	-	3421	30	NIC	ENSMUSG00000025159.9	novel	3412	30	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_29	52.4045363876748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969578	41932640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41969437
Isoform_83213_199	chr19	-	3470	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	22	3115	1	4	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969574	41932639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
Isoform_83214_14	chr19	-	3525	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	-34	3116	-34	3	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969630	41932640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
Isoform_83215_6	chr19	-	3798	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	28	2781	1	338	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCCACACTGCATCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	41969568	41932305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
Isoform_83218_138	chr19	-	1805	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	-3	-2	-3	-1	multi-exon	FALSE	canonical	2	63	junction_4	19.0574788468989	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTATGAACTTTCT	4137	False	NA	-1	True	AATAAA	-23	NA	42074799	42063378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
Isoform_83219_33	chr19	-	1905	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_4	34.0258725090188	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGTTATGAACTTTC	4151	False	NA	-2	True	AATAAA	-22	NA	42074785	42063379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067100_42067216_42074635
Isoform_83220_29	chr19	-	1896	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	36.2745089560148	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4142	False	NA	-3	True	AATAAA	-21	NA	42074794	42063380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067117_42067216_42074635
Isoform_83222_508	chr19	-	854	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	58	132	-12	-132	multi-exon	FALSE	canonical	3	851	junction_1	12	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTCTCACCATCT	NA	False	NA	-2	True	AATAAA	-16	NA	42117440	42111843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42112288_42113186_42113466_42117309
Isoform_83223_250	chr19	-	977	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	66	1	-4	-1	multi-exon	FALSE	canonical	3	851	junction_1	12	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGTCAGAGTGTGCTA	NA	False	NA	-6	True	AATAAA	-14	NA	42117432	42111712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42112288_42113186_42113466_42117309
Isoform_83224_56	chr19	-	1041	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	1	2	1	-2	multi-exon	FALSE	canonical	3	851	junction_1	12	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGTCAGAGTGTGCT	NA	False	NA	-7	True	AATAAA	-13	NA	42117497	42111713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42112288_42113186_42113466_42117309
Isoform_83225_76	chr19	-	912	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	0	132	0	-132	multi-exon	FALSE	canonical	3	851	junction_1	12	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTCTCACCATCT	NA	False	NA	-2	True	AATAAA	-16	NA	42117498	42111843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42112288_42113186_42113466_42117309
Isoform_83228_19	chr19	-	1797	3	FSM	ENSMUSG00000018822.8	ENSMUST00000018966.8	1900	3	95	8	95	-8	multi-exon	FALSE	canonical	2	12	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTAATTTCTTTATCCA	NA	False	NA	-6	True	AATAAA	-18	NA	42190596	42186417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42187471_42188219_42188298_42189930
Isoform_8323_261	chr10	+	745	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	-3	922	-3	96	multi-exon	FALSE	canonical	3	990	junction_2	137	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGTTATGCTGAAGTT	NA	False	NA	5	True	AATAAA	-17	NA	120062971	120067565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_120063029_120063878_120064109_120067107
Isoform_83230_27	chr19	-	2125	15	FSM	ENSMUSG00000042401.9	ENSMUST00000048630.8	2618	15	-2	495	0	2	multi-exon	FALSE	canonical	3	19	junction_14	18.8128538342208	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTGTGGAAAACTATAT	NA	False	NA	-15	True	AATAAA	-19	NA	42420224	42271968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
Isoform_83231_7	chr19	-	2614	15	FSM	ENSMUSG00000042401.9	ENSMUST00000048630.8	2618	15	-2	6	0	-6	multi-exon	FALSE	canonical	3	19	junction_14	18.8128538342208	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTAAGTCTTCCAGCC	NA	False	NA	-5	True	GATAAA	-21	NA	42420224	42271479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
Isoform_83232_10	chr19	-	1247	10	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-19205	-5	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	18.8325958557674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAACAACCTTTGTGGAAA	2486	False	NA	-22	True	AATAAA	-12	NA	42295598	42271975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42295464
Isoform_83234_4	chr19	-	2559	14	ISM	ENSMUSG00000042401.9	ENSMUST00000238290.2	2164	15	1	15250	1	-5	5prime_fragment	FALSE	canonical	3	19	junction_13	19.444656709652	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAACAACCTTTGTGGAAA	NA	False	NA	-22	True	AATAAA	-12	NA	42420223	42271975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
Isoform_83235_3	chr19	-	3026	14	ISM	ENSMUSG00000042401.9	ENSMUST00000238290.2	2164	15	31	14753	29	-5	5prime_fragment	FALSE	canonical	3	19	junction_13	19.444656709652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTAAGTCTTCCAGCCT	NA	False	NA	-4	True	GATAAA	-22	NA	42420193	42271478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
Isoform_83237_14	chr19	-	3721	15	FSM	ENSMUSG00000025185.15	ENSMUST00000026190.14	3738	15	37	-20	-4	20	multi-exon	FALSE	canonical	1	2	junction_12	2.28124563181019	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAACTGATTTTACAGC	NA	False	NA	NA	False	AATAAA	-17	NA	42601215	42582400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42601156
Isoform_83238_6	chr19	-	3795	15	FSM	ENSMUSG00000025185.15	ENSMUST00000026190.14	3738	15	-35	-22	-35	22	multi-exon	TRUE	canonical	1	2	junction_12	2.28124563181019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACTGATTTTACAGCAT	NA	False	NA	NA	False	AATAAA	-19	NA	42601287	42582398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42601156
Isoform_83239_3	chr19	-	2063	16	FSM	ENSMUSG00000060224.5	ENSMUST00000076505.4	3119	16	268	788	-3	-2	multi-exon	FALSE	canonical	1	1	junction_10	3.5863940416834	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTGCTTGTATTGTTT	NA	False	NA	NA	False	TTTAAA	-16	NA	42740946	42715084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42715429_42716095_42716217_42718060_42718168_42719757_42719913_42722159_42722317_42722521_42722595_42723861_42723997_42724334_42724477_42726527_42726626_42726709_42726772_42728773_42728928_42730946_42731103_42735785_42735860_42735935_42736030_42737822_42737843_42740775
Isoform_83245_32	chr19	-	2917	20	NIC	ENSMUSG00000025188.16	novel	2952	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_19	27.100714999103	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	NA	False	NA	-3	True	AATAAA	-19	NA	42768402	42743634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768176
Isoform_83246_303	chr19	-	2720	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	35	92	16	-1	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGCCTGTCCCTGGCC	NA	False	NA	-4	True	AATAAA	-18	NA	42768382	42743635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
Isoform_83247_14	chr19	-	2786	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	37	24	18	-24	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAATATCATGTATG	NA	False	NA	64	True	NA	NA	NA	42768380	42743567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
Isoform_83250_7	chr19	-	2149	18	NIC	ENSMUSG00000025188.16	novel	3196	18	NA	NA	18	-600	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	31.7861583333327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTAGGTGGTGAGAGGC	NA	False	NA	NA	False	TATAAA	-16	NA	42768380	42747518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_42747747_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
Isoform_83259_2688	chr19	-	1960	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	96	2	-24	-2	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	2688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGTTTGTGATCCATT	8413	False	NA	-5	True	NA	NA	NA	43512948	43488192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
Isoform_83260_156	chr19	-	2013	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	43	2	43	-2	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGTTTGTGATCCATT	8360	False	NA	-5	True	NA	NA	NA	43513001	43488192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
Isoform_83268_131	chr19	-	1520	4	FSM	ENSMUSG00000040414.9	ENSMUST00000046038.9	1535	4	12	3	-9	1	multi-exon	FALSE	canonical	3	130	junction_2	77.3146529162199	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663308	43652242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_43653083_43654210_43654268_43655353_43655583_43662914
Isoform_83269_183	chr19	-	2607	3	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-9	2	intron_retention	FALSE	canonical	3	293	junction_1	1	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTTGGGTTTGTC	NA	False	NA	-5	True	ATTAAA	-17	NA	43663308	43652241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_43653083_43654210_43655583_43662914
Isoform_83270_101	chr19	-	2639	3	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-21	1	intron_retention	FALSE	canonical	3	293	junction_1	1	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663341	43652242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_43653083_43654210_43655583_43662914
Isoform_83272_59	chr19	-	3735	2	FSM	ENSMUSG00000040414.9	ENSMUST00000235953.2	3724	2	-10	-1	-10	1	multi-exon	FALSE	canonical	3	295	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663309	43652242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_43655583_43662914
Isoform_83277_967	chr19	-	2924	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	20	1854	20	-1854	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGGATTTTTGTTTG	NA	False	NA	-2	True	AATAAA	-30	NA	43741419	43723546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
Isoform_83283_19	chr19	-	2739	8	NIC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	20	-1852	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	140.673743253019	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGATTTTTGTTTGGG	NA	False	NA	0	True	AATAAA	-32	NA	43741419	43723544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43737228_43737352_43739782_43739974_43741260
Isoform_83288_46	chr19	-	3855	14	FSM	ENSMUSG00000025195.10	ENSMUST00000212592.2	3901	14	48	-2	48	1	multi-exon	TRUE	canonical	3	34	junction_13	13.2052526755398	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTGTGTTTCCTTCAT	NA	False	NA	-4	True	AATAAA	-16	NA	43868159	43835258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858027_43858046_43858600_43858749_43862596_43862697_43863265_43863460_43868051
Isoform_83289_31	chr19	-	3911	14	FSM	ENSMUSG00000025195.10	ENSMUST00000212592.2	3901	14	-8	-2	-8	1	multi-exon	FALSE	canonical	3	34	junction_13	13.2052526755398	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTGTGTTTCCTTCAT	NA	False	NA	-4	True	AATAAA	-16	NA	43868215	43835258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858027_43858046_43858600_43858749_43862596_43862697_43863265_43863460_43868051
Isoform_83292_23	chr19	-	5040	14	FSM	ENSMUSG00000025195.10	ENSMUST00000212048.2	4186	14	89	-943	89	1	multi-exon	FALSE	canonical	3	36	junction_13	12.8730717519697	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTGTGTTTCCTTCAT	746	False	NA	-4	True	AATAAA	-16	NA	43879041	43835258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858027_43858046_43858600_43858749_43862596_43862697_43863265_43863460_43877748
Isoform_83296_17	chr19	-	1333	8	ISM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	5558	3	5558	-3	3prime_fragment	FALSE	canonical	3	24	junction_2	8.50929863533453	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTGCCACTTGCATG	NA	False	NA	0	True	ATTAAA	-19	NA	43969437	43944748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241
Isoform_83298_13	chr19	-	1444	9	FSM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	382	2	382	-2	multi-exon	FALSE	canonical	3	15	junction_8	10.3191266587827	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGCCACTTGCATGC	6244	False	NA	1	True	ATTAAA	-20	NA	43974613	43944747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241_43969439_43974504
Isoform_83300_6	chr19	-	1256	8	NNC	ENSMUSG00000025196.5	novel	1828	9	NA	NA	-7131	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	14.059639731791	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGTGCCACTTGCAT	4420	False	NA	-1	True	ATTAAA	-18	NA	43964263	43944749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43964143
Isoform_83305_18	chr19	-	3421	11	FSM	ENSMUSG00000025198.17	ENSMUST00000170801.8	3172	11	-252	3	-3	-3	multi-exon	FALSE	canonical	3	157	junction_6	17.066048165876	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGTGTGTGTTCTATT	NA	False	NA	-5	True	AATAAA	-16	NA	44058217	44023385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710
Isoform_83308_232	chr19	-	3220	12	FSM	ENSMUSG00000025198.17	ENSMUST00000071698.13	3228	12	5	3	5	-3	multi-exon	FALSE	canonical	3	64	junction_11	39.5783562189201	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGTGTGTGTTCTATT	NA	False	NA	-5	True	AATAAA	-16	NA	44058209	44023385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058027
Isoform_83309_380	chr19	-	3104	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	29	3	0	-3	multi-exon	TRUE	canonical	3	111	junction_11	27.8217466521579	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGTGTGTGTTCTATT	NA	False	NA	-5	True	AATAAA	-16	NA	44058195	44023385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
Isoform_83314_140	chr19	-	3484	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	12	6	1	-5	multi-exon	FALSE	canonical	3	185	junction_2	31.5901883501824	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGAATCTCTAC	NA	False	NA	-7	True	ATTAAA	-9	NA	44095907	44061779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
Isoform_83318_16	chr19	-	3361	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	116	-6	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_20	66.1814739938603	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44095605	44061780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095546
Isoform_83319_8	chr19	-	3419	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	58	-6	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_20	66.1814739938603	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44095663	44061780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095546
Isoform_8332_10	chr10	+	1122	3	FSM	ENSMUSG00000020224.16	ENSMUST00000130198.3	1463	3	-71	412	13	95	multi-exon	FALSE	canonical	3	35	junction_1	477.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTATGCTGAAGT	NA	False	NA	4	True	AATAAA	-16	NA	120063019	120067564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_120063455_120063878_120064109_120067107
Isoform_83320_110	chr19	-	3430	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	46	5	38	-5	multi-exon	FALSE	canonical	3	113	junction_2	45.2515193115104	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGAATCTCTAC	NA	False	NA	-7	True	ATTAAA	-9	NA	44095870	44061779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
Isoform_83321_104	chr19	-	3475	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	1	5	1	-5	multi-exon	FALSE	canonical	3	113	junction_2	45.2515193115104	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGAATCTCTAC	NA	False	NA	-7	True	ATTAAA	-9	NA	44095915	44061779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
Isoform_83323_19	chr19	-	3345	21	NNC	ENSMUSG00000025199.17	novel	3481	21	NA	NA	116	-5	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_20	73.0809653740288	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGAATCTCTAC	NA	False	NA	-7	True	ATTAAA	-9	NA	44095605	44061779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095546
Isoform_83326_7	chr19	-	2018	16	FSM	ENSMUSG00000025199.17	ENSMUST00000147423.8	2337	16	9	310	9	-310	multi-exon	FALSE	canonical	3	276	junction_3	19.8510005345379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGTAGAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	44095899	44070163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
Isoform_83327_15	chr19	-	1176	3	ISM	ENSMUSG00000025200.8	ENSMUST00000235288.2	1470	7	8249	9	-1122	1	3prime_fragment	FALSE	canonical	3	162	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGGCTGACAGATGTCT	4910	False	NA	-12	True	AATAGA	-15	NA	44102559	44098468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_44099100_44101387_44101486_44102112
Isoform_83330_26	chr19	-	2154	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	38.4159730092643	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCTTATGTTGCTTA	NA	False	NA	-1	True	AATAGA	-26	NA	44124286	44098457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
Isoform_83332_94	chr19	-	2774	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	30	777	-4	2	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTTCCACCTGGCCTC	NA	False	NA	-1	True	AATAAA	-22	NA	44124285	44097852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
Isoform_83333_201	chr19	-	2170	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	29	1382	-5	2	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCTTATGTTGCTTA	NA	False	NA	-1	True	AATAGA	-26	NA	44124286	44098457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
Isoform_83337_6	chr19	-	2888	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	19	674	4	105	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGCTCATAACTTAATCA	NA	False	NA	NA	False	NA	NA	NA	44124296	44097749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
Isoform_83340_8	chr19	-	2137	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	53.2202079340581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCTTATGTTGCTTA	NA	False	NA	-1	True	AATAGA	-26	NA	44124297	44098457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
Isoform_83342_8	chr19	-	2140	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	40.9509737188349	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGGCTGACAGATGTC	NA	False	NA	-13	True	AATAGA	-14	NA	44124296	44098469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
Isoform_83344_930	chr19	-	852	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	22	11	6	-11	multi-exon	FALSE	canonical	3	1199	junction_4	51.0165414351071	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAGGAAAACAAAA	985	False	NA	NA	False	NA	NA	NA	44134863	44127708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
Isoform_83349_31	chr19	-	1648	4	NIC	ENSMUSG00000057506.6	novel	885	5	NA	NA	6	-7	intron_retention	FALSE	canonical	3	1199	junction_3	40.0860186210715	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAACAAAACAAA	985	False	NA	NA	False	NA	NA	NA	44134863	44127704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44128153_44130562_44131580_44134379_44134497_44134797
Isoform_83353_43	chr19	-	2526	12	ISM	ENSMUSG00000037578.5	ENSMUST00000042026.5	3321	15	35281	6	35281	-5	3prime_fragment	FALSE	canonical	3	31	junction_9	12.7694107632134	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACGTCTTTGCATTTC	840	False	NA	-7	True	AATAAA	-11	NA	44145600	44136081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
Isoform_83354_3	chr19	-	2943	12	ISM	ENSMUSG00000037578.5	ENSMUST00000042026.5	3321	15	34864	6	34864	-5	3prime_fragment	FALSE	canonical	3	31	junction_9	12.7694107632134	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACGTCTTTGCATTTC	423	False	NA	-7	True	AATAAA	-11	NA	44146017	44136081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
Isoform_83355_4	chr19	-	2333	11	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35303	-5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	18.6142418593936	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACGTCTTTGCATTTC	862	False	NA	-7	True	AATAAA	-11	NA	44145578	44136081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44143886_44144116_44144279_44144505_44145490
Isoform_83356_24	chr19	-	2793	11	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35303	0	intron_retention	FALSE	canonical	3	31	junction_8	12.458330546265	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTTGCATTTCCTTCT	862	False	NA	-2	True	AATAAA	-16	NA	44145578	44136076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
Isoform_83358_9	chr19	-	2967	10	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35302	-5	intron_retention	FALSE	canonical	3	31	junction_7	13.1242871646519	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACGTCTTTGCATTTC	861	False	NA	-7	True	AATAAA	-11	NA	44145579	44136081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44143034_44143886_44144116_44144279_44144505_44145490
Isoform_8336_40	chr10	+	2240	10	FSM	ENSMUSG00000020218.12	ENSMUST00000020439.11	2294	10	46	8	-18	-3	multi-exon	FALSE	canonical	3	14	junction_1	5.2704627669473	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACTGTATGGGTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	120869910	120936547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_120870396_120870870_120871011_120911150_120911260_120918030_120918172_120919792_120919889_120920813_120920910_120926015_120926112_120931903_120932000_120932545_120932642_120935662
Isoform_83360_3	chr19	-	3019	10	NIC	ENSMUSG00000037578.5	novel	3529	14	NA	NA	35281	-5	intron_retention	FALSE	canonical	3	31	junction_7	12.3508384280802	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACGTCTTTGCATTTC	840	False	NA	-7	True	AATAAA	-11	NA	44145600	44136081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140902_44142097_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
Isoform_83361_4	chr19	-	5530	7	NIC	ENSMUSG00000037578.5	novel	3529	14	NA	NA	35309	0	intron_retention	FALSE	canonical	3	43	junction_6	11.9640665698954	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTTGCATTTCCTTCT	868	False	NA	-2	True	AATAAA	-16	NA	44145572	44136076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44140902_44142097_44144116_44144279_44144505_44145490
Isoform_83372_690	chr19	-	4817	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	15	0	15	0	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	7455	False	NA	-5	True	AATAAA	-22	NA	44396133	44382893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
Isoform_83377_246	chr19	-	4980	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	-148	0	22	0	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	7292	False	NA	-5	True	AATAAA	-22	NA	44396296	44382893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
Isoform_8338_4	chr10	+	1357	2	FSM	ENSMUSG00000034707.8	ENSMUST00000219847.2	1358	2	-17	18	1	-18	multi-exon	FALSE	canonical	3	195	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	121200995	121208137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_121201264_121207048
Isoform_83385_22	chr19	-	4905	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	-2692	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	245.996217224755	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	9760	False	NA	-5	True	AATAAA	-22	NA	44399010	44382893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824_44396018_44398806
Isoform_83388_10	chr19	-	4861	25	FSM	ENSMUSG00000051984.14	ENSMUST00000111985.2	3548	25	-18	-1295	-1	1045	multi-exon	TRUE	canonical	2	5	junction_17	4.98051759916131	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCTCCTCTGCATCCT	NA	False	NA	1	True	AATAAA	-21	NA	44534304	44504350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520732_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44532139_44532252_44534226
Isoform_83397_3180	chr19	-	655	5	FSM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	14	11	0	2	multi-exon	FALSE	canonical	3	4404	junction_1	502.944517317765	3180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGGTTTCTGTGTCT	1988	False	NA	-18	True	AATAAA	-18	NA	44543865	44538689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543755
Isoform_8340_342	chr10	+	3860	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	1	-6	1	2	multi-exon	FALSE	canonical	3	144	junction_4	13.2731878157773	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTCCTTTGTTTTTAG	NA	False	NA	10	True	ATTAAA	-22	NA	121200995	121233156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
Isoform_83401_332	chr19	-	781	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	25	592	3	391	multi-exon	FALSE	canonical	3	460	junction_1	27.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTCTGGAGGCTGTC	NA	False	NA	-1	True	AAAACA	-4	NA	44994856	44993859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44994380_44994501_44994609_44994702
Isoform_83403_79	chr19	-	1251	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	26	121	4	-121	multi-exon	FALSE	canonical	3	460	junction_1	27.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	44994855	44993388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44994380_44994501_44994609_44994702
Isoform_83409_24	chr19	-	4081	17	NNC	ENSMUSG00000074818.14	novel	3161	17	NA	NA	-890	-1	intron_retention	TRUE	canonical	2	6	junction_9	4.93987284755387	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGTCTGACTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	45035046	45015345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
Isoform_83411_3	chr19	-	1786	3	NNC	ENSMUSG00000025216.10	novel	2484	2	NA	NA	-1051	-760	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACAGCTTGATTATTTTC	NA	False	NA	NA	False	TATAAA	-30	NA	45225302	45221882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_45222697_45223341_45224081_45225069
Isoform_83412_4	chr19	-	2482	3	NNC	ENSMUSG00000025216.10	novel	2484	2	NA	NA	-995	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGAATGGACCGCGATC	NA	False	NA	NA	False	AATAAA	-14	NA	45225246	45221130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_45222697_45223341_45224081_45225069
Isoform_83415_80	chr19	-	2300	9	FSM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	22	2	22	-2	multi-exon	FALSE	canonical	3	33	junction_8	11.9973955507018	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCTGTCTGTGAG	NA	False	NA	0	True	AATAAA	-17	NA	45548948	45540715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_83416_76	chr19	-	2346	9	FSM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	-24	2	-24	-2	multi-exon	FALSE	canonical	3	33	junction_8	11.9973955507018	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCTGTCTGTGAG	NA	False	NA	0	True	AATAAA	-17	NA	45548994	45540715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_83417_3	chr19	-	2552	9	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	58	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	20.4435197556585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	-1	True	AATAAA	-16	NA	45548912	45540716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548635
Isoform_83418_9	chr19	-	3002	8	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	22	-2	intron_retention	FALSE	canonical	3	33	junction_7	12.7775312999988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCTGTCTGTGAG	NA	False	NA	0	True	AATAAA	-17	NA	45548948	45540715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_45541610_45541947_45542117_45543529_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_83419_13	chr19	-	2683	8	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	33	junction_7	11.0176111340908	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCTGTCTGTGAG	NA	False	NA	0	True	AATAAA	-17	NA	45548993	45540715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_83421_8	chr19	-	3386	7	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	33	junction_6	11.8988794990677	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCTGTCTGTGAG	NA	False	NA	0	True	AATAAA	-17	NA	45548994	45540715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_45542117_45543529_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_83422_19	chr19	-	2183	9	NIC	ENSMUSG00000040913.12	novel	2068	9	NA	NA	-172	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	23.8275051148877	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTTCTTTGGTGGTT	NA	False	NA	-7	True	AATAAA	-16	NA	45648923	45566694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_45567365_45567559_45567647_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
Isoform_83423_86	chr19	-	2238	9	FSM	ENSMUSG00000040913.12	ENSMUST00000046869.11	2068	9	-172	2	-172	-2	multi-exon	FALSE	canonical	3	63	junction_8	9.07520660921833	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTTCTTTGGTGGTT	NA	False	NA	-7	True	AATAAA	-16	NA	45648923	45566694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
Isoform_83431_39	chr19	-	1156	5	ISM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	27	1	-15	-1	intron_retention	FALSE	canonical	3	216	junction_3	14.3614066163451	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTGTGGCTTTTTCA	4914	False	NA	-1	True	AATAAA	-26	NA	45738003	45736173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495
Isoform_83434_1107	chr19	-	860	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	27	1	-15	-1	multi-exon	FALSE	canonical	3	216	junction_3	39.9229257444892	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTGTGGCTTTTTCA	4914	False	NA	-1	True	AATAAA	-26	NA	45738003	45736173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
Isoform_83461_1119	chr19	-	5044	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	11	2	11	-2	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	1119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGTGCTGCTTT	5487	False	NA	-14	True	AATAAA	-11	NA	45771979	45738699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
Isoform_83482_8	chr19	-	2295	7	ISM	ENSMUSG00000025221.17	ENSMUST00000239049.2	2113	8	7486	3	-384	-3	3prime_fragment	TRUE	canonical	3	16	junction_1	4.2687494916219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	45784527	45780787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018
Isoform_83483_17	chr19	-	2014	8	FSM	ENSMUSG00000025221.17	ENSMUST00000086993.11	1005	8	-9	-1000	-9	-3	multi-exon	FALSE	canonical	3	6	junction_7	6.66394502268034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	45800739	45780787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45800636
Isoform_83484_4	chr19	-	2579	6	NIC	ENSMUSG00000025221.17	novel	2113	8	NA	NA	-385	-3	intron_retention	FALSE	canonical	3	19	junction_1	3.87814388593306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	45784528	45780787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018
Isoform_83485_4	chr19	-	2302	7	NIC	ENSMUSG00000025221.17	novel	1005	8	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	6	junction_6	7.06320670013903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	45800744	45780787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45800636
Isoform_83488_204	chr19	-	3738	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-62	0	-62	0	multi-exon	FALSE	canonical	3	159	junction_20	17.3221707646588	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6585	False	NA	-3	True	ATTAAA	-17	NA	45986989	45805802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
Isoform_83490_22	chr19	-	3006	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-106	776	-106	-776	multi-exon	FALSE	canonical	3	159	junction_20	17.3221707646588	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGCCTACTTTGCTG	6541	False	NA	-2	True	AATAAA	-24	NA	45987033	45806578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
Isoform_83492_48	chr19	-	3795	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4918	0	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_25	35.5729335309867	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	NA	False	NA	-3	True	ATTAAA	-17	NA	45982009	45805802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817
Isoform_83494_5	chr19	-	3581	25	NIC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	40.9002003526742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6634	False	NA	-3	True	ATTAAA	-17	NA	45986940	45805802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45963405_45963553_45963657_45963715_45967038_45967152_45986854
Isoform_83499_43	chr19	-	2277	11	FSM	ENSMUSG00000025223.16	ENSMUST00000056931.14	2295	11	5	13	5	9	multi-exon	FALSE	canonical	3	31	junction_10	244.379806858095	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	8093	False	NA	-44	True	ATTAAA	-7	NA	46028055	46021045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
Isoform_83500_20	chr19	-	2311	11	FSM	ENSMUSG00000025223.16	ENSMUST00000056931.14	2295	11	-29	13	-29	9	multi-exon	FALSE	canonical	3	31	junction_10	244.379806858095	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	8059	False	NA	-44	True	ATTAAA	-7	NA	46028089	46021045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
Isoform_83505_17	chr19	-	2380	11	FSM	ENSMUSG00000025223.16	ENSMUST00000185355.7	2088	11	-283	-9	-280	9	multi-exon	FALSE	canonical	3	350	junction_1	132.738992010637	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	6438	False	NA	-44	True	ATTAAA	-7	NA	46033933	46021045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
Isoform_8351_337	chr10	+	3097	4	NNC	ENSMUSG00000053684.9	novel	3123	3	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_3	69.7726466620138	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATATATGGTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	121575846	121588770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_121576116_121581235_121581522_121586207_121587929_121587949
Isoform_83510_32	chr19	-	2270	11	NIC	ENSMUSG00000025223.16	novel	2295	11	NA	NA	6	9	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	267.114750622275	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	8094	False	NA	-44	True	ATTAAA	-7	NA	46028054	46021045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
Isoform_83511_318	chr19	-	2112	11	FSM	ENSMUSG00000025223.16	ENSMUST00000152946.8	2108	11	-18	14	-18	9	multi-exon	FALSE	canonical	3	192	junction_1	177.433255056655	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	6700	False	NA	-44	True	ATTAAA	-7	NA	46033671	46021045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
Isoform_83520_22	chr19	-	2963	10	FSM	ENSMUSG00000025223.16	ENSMUST00000137771.2	2014	10	-131	-818	9	9	multi-exon	TRUE	canonical	3	31	junction_9	235.530344562811	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	8097	False	NA	-44	True	ATTAAA	-7	NA	46028051	46021045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
Isoform_83522_542	chr19	-	2808	10	NIC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-18	9	intron_retention	FALSE	canonical	3	657	junction_1	53.8023359904074	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	6700	False	NA	-44	True	ATTAAA	-7	NA	46033671	46021045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
Isoform_83531_6	chr19	-	1507	4	FSM	ENSMUSG00000025229.16	ENSMUST00000026259.16	1380	4	-129	2	-129	-2	multi-exon	FALSE	canonical	3	5	junction_1	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCTGATGATTCAGACT	NA	False	NA	NA	False	AATAAA	-17	NA	46136894	46124125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46125045_46125421_46125625_46125803_46125934_46136639
Isoform_83539_44	chr19	-	1041	9	FSM	ENSMUSG00000036748.17	ENSMUST00000236980.2	999	9	-36	-6	7	0	multi-exon	FALSE	canonical	3	133	junction_8	339.490035752156	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46327007
Isoform_83541_25	chr19	-	1272	9	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	413	junction_5	271.660605121538	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCATTCTGCTCAT	5855	False	NA	-4	True	AGTAAA	-17	NA	46327066	46318980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751
Isoform_83544_31	chr19	-	1137	10	NIC	ENSMUSG00000036748.17	novel	1164	10	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	122	junction_9	349.700542086801	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATATGCTCATTCTGCT	5830	False	NA	-7	True	AGTAAA	-14	NA	46327091	46318983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
Isoform_83547_31	chr19	-	1195	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	349.486642921081	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATATGCTCATTCTGCT	5830	False	NA	-7	True	AGTAAA	-14	NA	46327091	46318983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
Isoform_83548_21	chr19	-	1151	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	365.48266750547	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5829	False	NA	-3	True	AGTAAA	-18	NA	46327092	46318979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46327007
Isoform_83549_29	chr19	-	1157	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	356.842566524722	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5883	False	NA	-2	True	AGTAAA	-19	NA	46327038	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46326958
Isoform_83551_134	chr19	-	1056	9	NIC	ENSMUSG00000036748.17	novel	1050	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	390	junction_8	277.077155319597	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5817	False	NA	-2	True	AGTAAA	-19	NA	46327104	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46327007
Isoform_83558_21	chr19	-	1060	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235977.2	1050	9	-15	5	7	-1	multi-exon	FALSE	canonical	3	87	junction_5	355.205486303351	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATATGCTCATTCTGCT	5829	False	NA	-7	True	AGTAAA	-14	NA	46327092	46318983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321141_46327007
Isoform_8356_6	chr10	+	2281	5	NNC	ENSMUSG00000053684.9	novel	3123	3	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	72.0590036012156	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGTATATATGGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	121575846	121588768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_121576116_121581235_121581522_121586207_121587020_121587832_121587924_121587945
Isoform_83561_17	chr19	-	1197	10	NIC	ENSMUSG00000036748.17	novel	1164	10	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	122	junction_9	380.63750942366	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5826	False	NA	-2	True	AGTAAA	-19	NA	46327095	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326851_46327007
Isoform_83562_19	chr19	-	1251	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	380.445937172565	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5830	False	NA	-2	True	AGTAAA	-19	NA	46327091	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326860_46326958
Isoform_83564_18	chr19	-	1234	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	89	junction_9	387.049363617282	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCATTCTGCTCAT	5855	False	NA	-4	True	AGTAAA	-17	NA	46327066	46318980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326870_46326958
Isoform_83566_77	chr19	-	1089	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235485.2	1790	9	-27	728	-9	0	multi-exon	FALSE	canonical	3	133	junction_8	321.93700859019	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5835	False	NA	-2	True	AGTAAA	-19	NA	46327086	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46327007
Isoform_83568_43	chr19	-	1328	9	ISM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	-3	-4	0	0	intron_retention	FALSE	canonical	3	415	junction_8	247.19526694498	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5855	False	NA	-2	True	AGTAAA	-19	NA	46327066	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751
Isoform_83573_66	chr19	-	1189	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	-28	3	8	-1	multi-exon	FALSE	canonical	3	122	junction_9	336.647010794011	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTATATGCTCATTCTG	5830	False	NA	-9	True	AGTAAA	-12	NA	46327091	46318985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
Isoform_83574_69	chr19	-	1202	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	336.420298561116	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5882	False	NA	-2	True	AGTAAA	-19	NA	46327039	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
Isoform_83575_36	chr19	-	1239	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	336.420298561116	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5845	False	NA	-2	True	AGTAAA	-19	NA	46327076	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
Isoform_83576_17	chr19	-	1172	10	FSM	ENSMUSG00000036748.17	ENSMUST00000167861.8	1941	10	41	728	1	0	multi-exon	FALSE	canonical	3	50	junction_9	353.322781114268	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5863	False	NA	-2	True	AGTAAA	-19	NA	46327058	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46327007
Isoform_83578_48	chr19	-	1232	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	344.205723727706	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5862	False	NA	-2	True	AGTAAA	-19	NA	46327059	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46326958
Isoform_8358_14	chr10	+	2688	3	NNC	ENSMUSG00000053684.9	novel	3123	3	NA	NA	14	-3300	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	69	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGAAATAGTATATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	121575856	121584988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_121576116_121581235_121581522_121582845
Isoform_83580_231	chr19	-	1097	9	FSM	ENSMUSG00000036748.17	ENSMUST00000051234.9	1833	9	8	728	8	0	multi-exon	FALSE	canonical	3	390	junction_8	253.325599525591	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5830	False	NA	-2	True	AGTAAA	-19	NA	46327091	46318978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
Isoform_83586_1000	chr19	-	2746	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	9	2	0	1	multi-exon	FALSE	canonical	3	273	junction_3	19.222122671547	1000	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTCTGACCTCTTTCT	NA	False	NA	-4	True	AATAAA	-17	NA	46384177	46365251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
Isoform_8359_61	chr10	+	2901	5	NNC	ENSMUSG00000053684.9	novel	2968	3	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	61.6157447410968	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGTATATATGGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	121575846	121588768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_121576116_121581402_121581522_121586207_121587359_121587384_121587924_121587945
Isoform_83593_226	chr19	-	932	6	FSM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	-100	11	5	0	multi-exon	FALSE	canonical	3	254	junction_1	35.3870032639103	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGAAATAGTATTAAAT	NA	False	NA	-32	True	AATAAA	-24	NA	46561632	46519545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
Isoform_83595_3	chr19	-	2093	19	NIC	ENSMUSG00000025041.18	novel	3939	19	NA	NA	0	350	combination_of_known_junctions	FALSE	canonical	2	3	junction_12	46.3087131496897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTGTATCTGT	7192	False	NA	-21	True	TTTAAA	-19	NA	46950747	46877096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46886766_46886961_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_83597_80	chr19	-	1902	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	2	1824	2	355	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTATCTGTTCTCT	7194	False	NA	-16	True	TTTAAA	-24	NA	46950745	46877091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_83598_43	chr19	-	1919	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-20	1829	-20	350	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTGTATCTGT	7172	False	NA	-21	True	TTTAAA	-19	NA	46950767	46877096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_83599_5	chr19	-	2240	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-36	1524	-36	-525	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTAGTCAGCCGTCTGTT	7156	False	NA	-4	True	AATACA	-15	NA	46950783	46876791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_836_2213	SIRV5	+	2473	18	FSM	SIRV5A	SIRV510	2474	18	1	0	1	0	multi-exon	FALSE	canonical	3	1532	junction_17	2924.81329602575	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1029	11867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
Isoform_83602_8	chr19	-	2882	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	2	844	2	-3	multi-exon	TRUE	canonical	3	118	junction_5	15.8666589126981	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGGGTATAAGGATTT	7194	False	NA	NA	False	AAAACA	-18	NA	46950745	46876111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_83604_11	chr19	-	2203	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	2	1523	2	-524	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGTCAGCCGTCTGTTG	7194	False	NA	-3	True	AATACA	-16	NA	46950745	46876790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_83608_5	chr19	-	2071	18	NIC	ENSMUSG00000025041.18	novel	7353	18	NA	NA	-72	348	combination_of_known_junctions	FALSE	canonical	1	5	junction_17	36.1371857478087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCAGTTTTGTGTATCT	6886	False	NA	-23	True	TTTAAA	-17	NA	46951053	46877098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950842
Isoform_83609_45	chr19	-	2330	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	-7	825	-7	355	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTATCTGTTCTCT	NA	False	NA	-16	True	TTTAAA	-24	NA	47003599	46877091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
Isoform_83610_3	chr19	-	3199	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	-52	1	-52	-1	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTGGCCCTTGTGTAG	NA	False	NA	NA	False	AGTAAA	-16	NA	47003644	46876267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
Isoform_83611_7	chr19	-	2658	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	-35	525	-35	-525	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTAGTCAGCCGTCTGTT	NA	False	NA	-4	True	AATACA	-15	NA	47003627	46876791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
Isoform_83614_56	chr19	-	2137	11	NIC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	25	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	203.669830853762	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGGTGTGTTGACAT	NA	False	NA	-20	True	AATAAA	-16	NA	47039304	47022056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_47023125_47025676_47025764_47028482_47028582_47030560_47030579_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
Isoform_83617_920	chr19	-	2145	10	FSM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	13	1	-1	1	multi-exon	FALSE	canonical	3	486	junction_3	49.2396507895471	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGGTGTGTTGACAT	NA	False	NA	-20	True	AATAAA	-16	NA	47039330	47022056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
Isoform_83618_40	chr19	-	2186	10	FSM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	-28	1	-26	1	multi-exon	FALSE	canonical	3	486	junction_3	49.2396507895471	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGGTGTGTTGACAT	NA	False	NA	-20	True	AATAAA	-16	NA	47039371	47022056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
Isoform_8362_13	chr10	+	3112	10	FSM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	1	3256	1	1090	multi-exon	FALSE	canonical	0	0	junction_1	11.6428327977153	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTCATTGTGATGTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	122514687	122778444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_122515336_122618087_122618251_122638139_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
Isoform_83623_17	chr19	-	4764	9	NIC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	493	junction_6	49.5654554604313	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGAGGTGTGTTGAC	NA	False	NA	-22	True	AATAAA	-14	NA	47039328	47022058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_47023125_47025676_47025764_47028482_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
Isoform_83625_141	chr19	-	2158	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	147.016585945974	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGGTGTGTTGACAT	NA	False	NA	-20	True	AATAAA	-16	NA	47039347	47022056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_47023125_47025676_47025760_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
Isoform_83631_1351	chr19	-	344	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	19	-1	1	1	multi-exon	FALSE	canonical	3	3669	junction_3	1157.30270696804	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTTGTCTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	47079063	47071905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
Isoform_83632_125	chr19	-	401	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	-38	-1	-34	1	multi-exon	FALSE	canonical	3	3669	junction_3	1157.30270696804	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTTGTCTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	47079120	47071905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
Isoform_83637_10	chr19	-	2191	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	-148	415	-148	-415	multi-exon	FALSE	canonical	2	8	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTAGACAGGGTATTT	5181	False	NA	-7	True	GATAAA	-16	NA	47126881	47120676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47121613_47123787_47124505_47126343
Isoform_83639_7	chr19	-	2697	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	-656	417	-656	-417	multi-exon	FALSE	canonical	2	8	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCCTAGACAGGGTAT	4673	False	NA	-9	True	GATAAA	-14	NA	47127389	47120678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47121613_47123787_47124505_47126343
Isoform_83641_12	chr19	-	2012	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	31	415	31	-415	multi-exon	FALSE	canonical	2	8	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTAGACAGGGTATTT	5360	False	NA	-7	True	GATAAA	-16	NA	47126702	47120676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47121613_47123787_47124505_47126343
Isoform_83642_3	chr19	-	1065	6	NIC	ENSMUSG00000053617.13	novel	799	5	NA	NA	3	8	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	1.83303027798234	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTCCTGTGTTCCTG	7925	False	NA	NA	False	AAGAAA	-21	NA	47452837	47352039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_47352444_47353061_47353154_47361822_47361900_47386254_47386331_47412928_47413010_47452502
Isoform_83644_60	chr19	-	2001	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	-7	-2	-7	2	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTCCTTATGACTTGA	NA	False	NA	-8	True	AATAAA	-29	NA	47525565	47489469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
Isoform_83646_116	chr19	-	1941	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	37	14	12	-9	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGGCATTTCAATTCA	NA	False	NA	-24	True	AATAAA	-13	NA	47525521	47489485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
Isoform_83648_6	chr19	-	1754	10	NIC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	-11	-10	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	41.1369288301916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTGGCATTTCAATTC	NA	False	NA	-25	True	AATAAA	-12	NA	47525496	47489486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525413
Isoform_83649_8	chr19	-	1974	5	FSM	ENSMUSG00000042694.18	ENSMUST00000182431.8	558	5	-116	-1300	14	1300	multi-exon	TRUE	canonical	1	2	junction_1	57.4429064376099	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGTGGATGTTACATT	NA	False	NA	NA	False	AATAAA	-13	NA	47525519	47509270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47510637_47513125_47513195_47517075_47517172_47524634_47524811_47525252
Isoform_8365_54	chr10	+	2081	8	ISM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	123674	3255	-8788	1091	3prime_fragment	FALSE	canonical	3	22	junction_1	4.03049599419025	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCATTGTGATGTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	122638360	122778445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
Isoform_83651_5	chr19	-	2078	2	FSM	ENSMUSG00000042694.18	ENSMUST00000182714.2	690	2	-42	-1346	6	1346	multi-exon	FALSE	canonical	3	136	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47525527	47523007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47524811_47525252
Isoform_83652_6	chr19	-	792	2	FSM	ENSMUSG00000042694.18	ENSMUST00000182714.2	690	2	-56	-46	-8	46	multi-exon	FALSE	canonical	3	136	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACATGTGCTTAAGGT	NA	False	NA	NA	False	NA	NA	NA	47525541	47524307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47524811_47525252
Isoform_83653_3	chr19	-	3765	2	FSM	ENSMUSG00000117975.2	ENSMUST00000095998.7	3760	2	-3	-2	-3	2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGTAGAGTTTGCTT	6771	False	NA	NA	False	ATTAAA	-18	NA	47907741	47883038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_47886625_47907562
Isoform_83654_8	chr19	-	3838	2	NIC	ENSMUSG00000117975.2	novel	351	3	NA	NA	-72	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGGAGTAGAGTTTGCT	6702	False	NA	NA	False	ATTAAA	-17	NA	47907810	47883039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_47886630_47907562
Isoform_83655_11	chr19	-	3768	2	NIC	ENSMUSG00000117975.2	novel	351	3	NA	NA	3	6	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGAGTTTGCTTTTTA	6777	False	NA	NA	False	ATTAAA	-22	NA	47907735	47883034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_47886630_47907562
Isoform_83677_1700	chr19	-	2485	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1593	0	20	0	multi-exon	FALSE	canonical	3	790	junction_19	199.189727395767	1700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5079	False	NA	-3	True	AATAAA	-14	NA	53027052	52979613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
Isoform_83678_142	chr19	-	2526	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1552	0	-21	0	multi-exon	FALSE	canonical	3	790	junction_19	199.189727395767	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5038	False	NA	-3	True	AATAAA	-14	NA	53027093	52979613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
Isoform_8368_6	chr10	+	5353	8	ISM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	123654	3	-8808	-3	3prime_fragment	FALSE	canonical	3	22	junction_1	4.03049599419025	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTTTGGGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	122638340	122781697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
Isoform_83680_1753	chr19	-	2416	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	690	junction_19	186.942819408855	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5059	False	NA	-3	True	AATAAA	-14	NA	53027072	52979613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
Isoform_83689_6	chr19	-	2157	7	NIC	ENSMUSG00000025024.8	novel	1992	6	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	104.802459682755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGTGTTAACAAAGGGG	NA	False	NA	-5	True	AATAAA	-20	NA	53379031	53367823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53374803_53374988_53377733_53377854_53378846
Isoform_83690_199	chr19	-	1940	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	5	3	1	-3	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCCAGTGTGTTAACA	NA	False	NA	-11	True	AATAAA	-14	NA	53379004	53367829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_83691_25	chr19	-	2045	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-100	3	-100	-3	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCCAGTGTGTTAACA	NA	False	NA	-11	True	AATAAA	-14	NA	53379109	53367829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_83692_30	chr19	-	2156	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-25	-183	-25	177	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTAGTAAACTGAAATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	53379034	53367643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_83694_55	chr19	-	1495	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-21	474	-21	9	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGCCCCTTCTCTGGTG	NA	False	NA	1	True	ATTAAA	-25	NA	53379030	53368300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_837_6203	SIRV5	+	2028	16	FSM	SIRV5A	SIRV505	2029	16	1	0	1	0	multi-exon	FALSE	canonical	3	5578	junction_10	1970.92572045614	6203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1001	10991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
Isoform_8370_39	chr10	+	3972	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-80	124	5	1	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGAAGTTTTTTCAATA	NA	False	NA	19	True	TATAAA	-21	NA	125802041	125851104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
Isoform_83700_11	chr19	-	1989	6	FSM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	-31	-480	-27	-3	multi-exon	FALSE	canonical	3	22	junction_3	83.1903840596977	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCCAGTGTGTTAACA	NA	False	NA	-11	True	AATAAA	-14	NA	53379036	53367829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53377733_53377854_53378846
Isoform_8371_209	chr10	+	3947	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-55	124	-21	1	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGAAGTTTTTTCAATA	NA	False	NA	19	True	TATAAA	-21	NA	125802066	125851104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
Isoform_83710_3	chr19	-	1839	3	ISM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	1046	-5	599	5	3prime_fragment	FALSE	canonical	3	143	junction_2	31.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAACAGTGTTTCACATG	NA	False	NA	NA	False	AATAAA	-17	NA	53932012	53918286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_53919934_53920560_53920637_53931896
Isoform_83711_15	chr19	-	771	4	FSM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	-20	-89	-17	-1	multi-exon	FALSE	canonical	3	94	junction_3	45.8427263102398	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTGTTGGGCTTGTAC	NA	False	NA	NA	False	AATAAA	-12	NA	53932679	53919445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932586
Isoform_83713_36	chr19	-	736	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	156	1151	3	-2	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGGGCTTGTACACT	NA	False	NA	NA	False	AATAAA	-15	NA	53932902	53919442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
Isoform_83714_10	chr19	-	914	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	-20	1149	-20	0	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGGCTTGTACACTAC	NA	False	NA	NA	False	AATAAA	-17	NA	53933078	53919440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
Isoform_83718_99	chr19	-	5941	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	-25	-2084	-25	-14	multi-exon	FALSE	canonical	3	55	junction_4	9.97045635866283	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCCGACTGAT	8978	False	NA	-14	True	AATAAA	-5	NA	55087908	55056081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
Isoform_83723_89	chr19	-	2279	11	FSM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	4	-20	0	1	multi-exon	FALSE	canonical	3	26	junction_10	157.939355450122	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTGTTTTTAGTTT	7445	False	NA	-6	True	AATAAA	-39	NA	55304458	55286731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
Isoform_83724_1119	chr19	-	2160	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	6	2	0	-2	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAAGCATTGTTTTTAG	7445	False	NA	-9	True	AATAAA	-36	NA	55304458	55286734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
Isoform_83730_13	chr19	-	2445	11	NNC	ENSMUSG00000024982.11	novel	2263	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	162.400615762379	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTGTTTTTAGTTT	7442	False	NA	-6	True	AATAAA	-39	NA	55304461	55286731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55303948
Isoform_83737_4	chr19	-	4340	9	ISM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	39	0	39	0	intron_retention	FALSE	canonical	3	154	junction_5	17.1518949390439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCATATTTGGATGGG	8204	False	NA	-10	True	AATAAA	-18	NA	56536445	56517600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068
Isoform_83738_16	chr19	-	4292	10	FSM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	-183	0	8	0	multi-exon	FALSE	canonical	3	154	junction_5	33.6088612653799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCATATTTGGATGGG	7982	False	NA	-10	True	AATAAA	-18	NA	56536667	56517600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
Isoform_83739_75	chr19	-	4094	10	FSM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	20	-5	20	3	multi-exon	FALSE	canonical	3	154	junction_5	33.6088612653799	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATTTGGATGGGTTTCA	8185	False	NA	-5	True	AATAAA	-23	NA	56536464	56517595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
Isoform_8374_5	chr10	+	4078	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-61	-1	24	1	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTCTCCAATGCATTT	NA	False	NA	NA	False	AATAAA	-35	NA	125802060	125851229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
Isoform_83742_8	chr19	+	853	2	Antisense	novelGene_ENSMUSG00000025077.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAGTCTCCTCCGAGG	NA	False	NA	NA	False	NA	NA	NA	56535465	56536588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_56536135_56536404
Isoform_83745_83	chr19	-	6449	16	FSM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-8	4	-8	-4	multi-exon	FALSE	canonical	3	40	junction_2	9.58239125804317	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGTCTGTTGATGGC	5189	False	NA	-5	True	ATTAAA	-18	NA	56810630	56775916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
Isoform_83747_4	chr19	-	6376	16	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-19	-5	intron_retention	FALSE	canonical	2	3	junction_11	16.2693986776812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTGTCTGTTGATGG	5178	False	NA	-6	True	ATTAAA	-17	NA	56810641	56775917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796492_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
Isoform_83748_3	chr19	-	6240	15	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-20	-5	intron_retention	FALSE	canonical	0	0	junction_1	17.1608536489064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTGTCTGTTGATGG	5177	False	NA	-6	True	ATTAAA	-17	NA	56810642	56775917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_56779479_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
Isoform_8375_470	chr10	+	4575	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	242	0	-70	0	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814827	126835838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
Isoform_83750_3	chr19	-	6734	14	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-19	1291	intron_retention	FALSE	canonical	3	43	junction_2	9.1554620422511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTCTGCATTATTTC	5178	False	NA	NA	False	AATAAA	-19	NA	56810641	56777671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
Isoform_83751_3	chr19	-	8461	14	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	9	-4	intron_retention	TRUE	canonical	3	43	junction_2	9.1554620422511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGTCTGTTGATGGC	5206	False	NA	-5	True	ATTAAA	-18	NA	56810613	56775916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
Isoform_83755_3	chr19	-	3938	19	FSM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	-405	-2	-375	2	multi-exon	FALSE	canonical	0	0	junction_18	3.34257976810918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGTTTCCCTTGTATT	NA	False	NA	NA	False	AATAAA	-13	NA	56997035	56900790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56996582
Isoform_83756_3	chr19	-	3576	19	FSM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	-45	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_18	3.34257976810918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGGTTTCCCTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	56996675	56900792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56996582
Isoform_83759_45	chr19	-	5525	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	10	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.9193931188232	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGAGTGGCAGTCCTT	NA	False	NA	-7	True	AATAAA	-18	NA	57107429	57021703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
Isoform_83761_39	chr19	-	5560	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.9193931188232	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGCAGTCCTTTGAATC	NA	False	NA	-1	True	AATAAA	-24	NA	57107458	57021697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
Isoform_83763_4	chr19	-	6055	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	15	-4	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	19.9193931188232	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGCACCAGCGCTCATT	NA	False	NA	NA	False	AATAAA	-18	NA	57107424	57021168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
Isoform_83764_6	chr19	-	6042	21	NIC	ENSMUSG00000025085.17	novel	3184	23	NA	NA	-29	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	32.2897429534519	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGAGTGGCAGTCCTTT	7771	False	NA	-6	True	AATAAA	-19	NA	57170769	57021702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57170657
Isoform_83766_6	chr19	-	5591	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	-27	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	24.5351448606552	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGCAGTCCTTTGAATC	NA	False	NA	-1	True	AATAAA	-24	NA	57107483	57021697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
Isoform_83767_6	chr19	-	5531	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	10	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	24.5351448606552	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGAGTGGCAGTCCTT	NA	False	NA	-7	True	AATAAA	-18	NA	57107429	57021703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
Isoform_83768_7	chr19	-	5405	15	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	26.4856526428625	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	57107452	57021705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
Isoform_83770_8	chr19	-	5738	12	FSM	ENSMUSG00000025092.8	ENSMUST00000066285.6	5734	12	-4	0	-4	0	multi-exon	TRUE	canonical	2	6	junction_2	4.33704016068239	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCCTAGAATCGTTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	58849420	58784181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_58788431_58789244_58789349_58792897_58793157_58793832_58793938_58794457_58794545_58797881_58798054_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
Isoform_83772_8	chr19	-	3494	17	FSM	ENSMUSG00000041362.18	ENSMUST00000047511.15	3974	17	478	2	447	-2	multi-exon	FALSE	canonical	1	1	junction_15	2.31081019341702	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGTGTTTCTCTGACT	NA	False	NA	NA	False	ATTAAA	-18	NA	59064054	58961929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_58963641_58978620_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062_59049116_59063886
Isoform_83773_6	chr19	-	3631	17	FSM	ENSMUSG00000041362.18	ENSMUST00000047511.15	3974	17	481	-138	450	-2	multi-exon	FALSE	canonical	1	1	junction_15	2.31081019341702	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAAGGGTCCGCTGTGGT	NA	False	NA	NA	False	ATTAAA	-21	NA	59064051	58961789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_58963641_58978620_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062_59049116_59063886
Isoform_83777_85	chr19	-	4671	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-17	1328	-17	-1328	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGGTGTCTTGTGGCC	NA	False	NA	-2	True	NA	NA	NA	59334229	59286937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
Isoform_83779_39	chr19	-	6037	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-59	4	-59	-4	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGAATATCTTCATT	NA	False	NA	-37	True	AATAAA	-12	NA	59334271	59285613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
Isoform_8378_46	chr10	+	4835	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	-18	0	-18	0	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814567	126835838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
Isoform_83784_82	chr19	-	5999	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-20	3	-20	-3	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGAATATCTTCATTT	NA	False	NA	-36	True	AATAAA	-13	NA	59334232	59285612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
Isoform_83786_8	chr19	-	6166	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-23	-161	-23	161	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCTCTTCATTGTTTTTA	NA	False	NA	-2	True	ATTAAA	-13	NA	59334235	59285448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
Isoform_83788_8	chr19	-	7093	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-23	-1088	-23	1088	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGTCTGTGTATTT	NA	False	NA	-5	True	ATTAAA	-12	NA	59334235	59284521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
Isoform_83791_9	chr19	-	2039	4	ISM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-22	7414	-22	-7414	5prime_fragment	FALSE	canonical	3	135	junction_2	6.23609564462324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTGAGTGTATATACA	NA	False	NA	NA	False	AATAAA	-16	NA	59334234	59293023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_59293753_59303689_59303793_59316182_59316306_59333150
Isoform_83792_11	chr19	-	1755	9	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	10	junction_8	106.243529214724	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTGTGTGTGTG	9774	False	NA	NA	False	AGTAAA	-13	NA	60215128	60187331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60213296_60213332_60214663
Isoform_83794_49	chr19	-	1722	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	1	312	1	1	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTGTGTGTGTGTA	9774	False	NA	NA	False	AGTAAA	-15	NA	60215128	60187329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
Isoform_83795_5	chr19	-	1940	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	-1	96	-1	-96	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATTGGCTTGTTTGTTT	9772	False	NA	NA	False	NA	NA	NA	60215130	60187113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
Isoform_83797_5	chr19	-	2036	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	0	-1	0	1	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGGAAGTCATTGTCC	9773	False	NA	NA	False	AATGAA	-26	NA	60215129	60187016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
Isoform_83798_89	chr19	-	1643	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9774	False	NA	NA	False	AGTAAA	-14	NA	60215128	60187330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
Isoform_83802_5	chr19	-	1850	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-1	-108	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTCTTGTTTTGGATTG	9772	False	NA	NA	False	NA	NA	NA	60215130	60187125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
Isoform_83803_5	chr19	-	1957	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCTGGGAAGTCATTGT	9772	False	NA	NA	False	AATGAA	-24	NA	60215130	60187018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
Isoform_83805_17	chr19	-	1309	8	FSM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	-10	-348	1	0	multi-exon	FALSE	canonical	3	34	junction_7	86.2054972440971	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9774	False	NA	NA	False	AGTAAA	-14	NA	60215128	60187330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60215075
Isoform_83806_5	chr19	-	1635	7	FSM	ENSMUSG00000057858.9	ENSMUST00000235293.2	1598	7	-22	-15	-2	-1	multi-exon	FALSE	canonical	3	31	junction_5	113.09533834582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTGTGTGTGTG	9771	False	NA	NA	False	AGTAAA	-13	NA	60215131	60187331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214663
Isoform_83807_14	chr19	-	1555	7	NIC	ENSMUSG00000057858.9	novel	1598	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	31	junction_5	103.870779764517	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9774	False	NA	NA	False	AGTAAA	-14	NA	60215128	60187330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214741
Isoform_83808_7	chr19	-	1304	6	NIC	ENSMUSG00000057858.9	novel	1598	7	NA	NA	1	0	intron_retention	FALSE	canonical	2	3	junction_5	111.662706397436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9774	False	NA	NA	False	AGTAAA	-14	NA	60215128	60187330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60214741
Isoform_83817_66	chr19	-	3163	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	125	2504	55	128	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTGTTGTGTTAGTAAA	6471	False	NA	-2	True	AATAAA	-15	NA	60569338	60515637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_83820_32	chr19	-	5736	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	45	11	-7	-11	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCAGGTGTTCCTGGGTT	6391	False	NA	-10	True	AATAAA	-38	NA	60569418	60513144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_83829_64	chr19	-	5654	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	102	36	32	-36	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAAACTTGCTTTTTA	6448	False	NA	-35	True	AATAAA	-13	NA	60569361	60513169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_83831_6	chr19	-	3285	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	6	2501	6	131	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTGTGTTAGTAAATTA	6352	False	NA	1	True	AATAAA	-18	NA	60569457	60515634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_83837_5	chr19	-	3153	8	FSM	ENSMUSG00000033417.17	ENSMUST00000166712.9	1305	8	-7	-1841	-7	128	multi-exon	FALSE	canonical	2	21	junction_3	70.8312164549628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTGTTGTGTTAGTAAA	6391	False	NA	-2	True	AATAAA	-15	NA	60569418	60515637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_83838_13	chr19	-	3414	8	FSM	ENSMUSG00000033417.17	ENSMUST00000166712.9	1305	8	42	-2151	24	438	multi-exon	FALSE	canonical	2	21	junction_3	70.8312164549628	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTCCTGAAAGTA	6440	False	NA	-4	True	AATAAA	-16	NA	60569369	60515327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_83843_5	chr19	-	5580	8	FSM	ENSMUSG00000033417.17	ENSMUST00000166712.9	1305	8	41	-4316	23	-29	multi-exon	FALSE	canonical	2	21	junction_3	70.8312164549628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTTTTAAGTTTTG	6439	False	NA	-28	True	AATAAA	-20	NA	60569370	60513162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_839_724	SIRV5	+	1983	18	FSM	SIRV5A	SIRV502	1984	18	1	0	1	0	multi-exon	FALSE	canonical	3	681	junction_4	3430.92271124242	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1020	10989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
Isoform_83917_1114	chr19	-	5143	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-18	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8736	False	NA	-31	True	AATAAA	-17	NA	60779099	60749554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
Isoform_83919_141	chr19	-	4509	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-56	672	-41	50	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTATCTTGGTATACAATT	8698	False	NA	-20	True	NA	NA	NA	60779137	60750226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
Isoform_83952_7	chr19	-	1290	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	13	6	13	4	multi-exon	FALSE	canonical	3	10	junction_12	6.9961950774782	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCATCAAAAGGTAT	NA	False	NA	NA	False	AATAAA	-24	NA	60849904	60827191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
Isoform_83953_13	chr19	-	1235	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	64	10	9	0	multi-exon	FALSE	canonical	3	10	junction_12	6.9961950774782	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAGAAATCATCAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	60849853	60827195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
Isoform_83954_6	chr19	-	1158	13	NIC	ENSMUSG00000063698.10	novel	1309	14	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	6.73094016876956	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGAAATCATCAAAAGG	NA	False	NA	NA	False	AATAAA	-21	NA	60849850	60827194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60848466_60848533_60849736
Isoform_83961_904	chr19	-	1432	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	24	22	24	-22	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	904	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTGCGTTTTTGACT	1471	False	NA	-23	True	AATAAA	-12	NA	60862970	60852510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
Isoform_83967_5	chr19	-	2584	4	FSM	ENSMUSG00000074733.15	ENSMUST00000205854.2	466	4	21	-2139	-1	-1	multi-exon	FALSE	canonical	2	4	junction_1	21.5148527508066	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCTTTGGTCATGGT	NA	False	NA	-5	True	NA	NA	NA	61129234	61103422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_61105727_61115444_61115506_61115875_61116003_61129142
Isoform_83969_33	chr19	-	1434	8	ISM	ENSMUSG00000059326.8	ENSMUST00000237386.2	1771	11	687	-9	-6	0	3prime_fragment	FALSE	canonical	3	89	junction_6	20.6861878398834	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9865	False	NA	-2	True	NA	NA	NA	61215127	61212839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962
Isoform_8397_14	chr10	+	1058	2	FSM	ENSMUSG00000006732.15	ENSMUST00000135655.2	1057	2	1	-2	0	2	multi-exon	FALSE	canonical	3	433	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	126877826	126879873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126877940_126878928
Isoform_83974_15	chr19	-	1917	12	FSM	ENSMUSG00000059326.8	ENSMUST00000076046.7	1849	12	-67	-1	-56	1	multi-exon	FALSE	canonical	3	33	junction_11	40.804310256849	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGTTTTCTTTTGC	9752	False	NA	-1	True	NA	NA	NA	61216923	61212838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
Isoform_83975_20	chr19	-	1868	12	FSM	ENSMUSG00000059326.8	ENSMUST00000076046.7	1849	12	-19	0	-8	0	multi-exon	FALSE	canonical	3	33	junction_11	40.804310256849	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9800	False	NA	-2	True	NA	NA	NA	61216875	61212839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
Isoform_83976_7	chr19	-	1432	8	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	38.6924028824306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9881	False	NA	-2	True	NA	NA	NA	61215111	61212839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214638_61214823_61214962
Isoform_83977_10	chr19	-	1518	7	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	16	0	intron_retention	FALSE	canonical	3	89	junction_5	19.9728983041187	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9887	False	NA	-2	True	NA	NA	NA	61215105	61212839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214494_61214652_61214823_61214962
Isoform_83978_5	chr19	-	1531	7	NNC	ENSMUSG00000059326.8	novel	1771	11	NA	NA	16	-1	intron_retention	FALSE	canonical	3	24	junction_5	41.3709506242672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTTTGTTTTCTTTT	9887	False	NA	-3	True	NA	NA	NA	61215105	61212840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214494_61214638_61214823_61214962
Isoform_83979_3	chr19	-	1516	7	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	14	0	intron_retention	FALSE	canonical	3	89	junction_5	22.3364425696364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9885	False	NA	-2	True	NA	NA	NA	61215107	61212839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_61213472_61213570_61213653_61213761_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962
Isoform_83980_4	chr19	-	2028	3	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	15	0	intron_retention	FALSE	canonical	3	136	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9886	False	NA	-2	True	NA	NA	NA	61215106	61212839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_61213472_61213570_61214823_61214962
Isoform_83981_3	chr19	-	464	2	Genic_Genomic	ENSMUSG00000093314.3	novel	76	1	NA	NA	-361	309	multi-exon	FALSE	canonical	3	548	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGACCCTGTGTTCGCTA	NA	False	NA	-41	True	AATAAA	-13	NA	8866499	8865753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_8865832_8866113
Isoform_83983_3	chr19	-	528	2	Genic_Genomic	ENSMUSG00000093314.3	novel	76	1	NA	NA	-424	310	multi-exon	FALSE	canonical	3	548	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACCCTGTGTTCGCTAC	NA	False	NA	-40	True	AATAAA	-14	NA	8866562	8865752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_8865832_8866113
Isoform_83984_11	chr19	-	1455	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAGAGTTTTGTC	5178	False	NA	NA	False	AATAAA	-19	NA	53052911	53039156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_53040340_53050500_53050648_53052786
Isoform_83985_7	chr19	-	1412	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTTGTCTTTCTTGTA	5178	False	NA	NA	False	AATAAA	-28	NA	53052911	53039147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_53040340_53050500_53050648_53052838
Isoform_83986_3	chr19	-	1527	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGAGTTTTGTCTTTCTT	5175	False	NA	NA	False	AATAAA	-25	NA	53052914	53039150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_53040340_53050437_53050648_53052786
Isoform_83987_4	chr19	-	478	3	Intergenic	novelGene_5932	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_2	4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGTGTCAGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	61301997	61286917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_61287117_61287295_61287423_61301845
Isoform_83988_5	chr19	-	2556	3	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16435	1719	multi-exon	FALSE	canonical	2	4	junction_1	19	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAAAAATATAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	61301942	61283620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_61285953_61287295_61287423_61301845
Isoform_83994_15	chr19	-	2457	9	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.2113829314077	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	-1	True	AATAAA	-16	NA	45548953	45540716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_45541763_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_83995_6	chr19	-	2407	15	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	21.1944351571976	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTAAGTCTTCCAGCC	NA	False	NA	-5	True	GATAAA	-21	NA	42420223	42271479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_-_42271914_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
Isoform_83998_47	chr19	+	3194	22	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-2771	combination_of_known_junctions	TRUE	canonical	3	40	junction_1	400.999024546288	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919404	38956724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38919663_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
Isoform_84_63	ERCC-00071	+	625	1	FSM	ERCC-00071A	DQ883654	626	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00071_+_0_600
Isoform_840_466	SIRV5	+	1889	17	FSM	SIRV5A	SIRV501	1890	17	1	0	1	0	multi-exon	FALSE	canonical	3	1808	junction_14	3064.59256060247	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1057	10991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
Isoform_84007_1057	chr19	+	795	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	-1	8	-1	-2	multi-exon	FALSE	canonical	3	1715	junction_6	72.3058703625708	1057	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGAGCCTGTGACTTG	7370	False	NA	5	True	NA	NA	NA	3333058	3341193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
Isoform_84015_238	chr19	+	4287	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	29	1	29	-1	multi-exon	TRUE	canonical	3	230	junction_1	37.3718386086055	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCTGTCCCTGTCTC	NA	False	NA	17	True	AATAAA	-19	NA	3373313	3435732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
Isoform_84016_737	chr19	+	4254	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	63	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	37.3718386086055	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCTGTCCCTGTCTCC	NA	False	NA	18	True	AATAAA	-20	NA	3373347	3435733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
Isoform_8402_161	chr10	+	1351	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	26	414	0	52	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGTGTGTGGCTCAGG	NA	False	NA	3	True	NA	NA	NA	126877826	126881820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
Isoform_8403_117	chr10	+	1761	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	26	4	0	-4	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTTTGAGTGTTTG	NA	False	NA	9	True	TTTAAA	-14	NA	126877826	126882230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
Isoform_8404_54	chr10	+	2898	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	26	-1133	0	1133	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGCAAA	NA	False	NA	NA	False	NA	NA	NA	126877826	126883367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
Isoform_84043_11	chr19	+	2189	9	FSM	ENSMUSG00000024905.16	ENSMUST00000025840.16	2234	9	7	38	7	0	multi-exon	FALSE	canonical	1	2	junction_6	4.715334028465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTTAGTAGCTGAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	3438863	3457785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3439334_3442102_3442262_3443924_3444046_3445919_3445994_3446962_3447055_3452485_3452577_3454048_3454187_3454932_3455109_3456917
Isoform_84044_24	chr19	+	1761	9	FSM	ENSMUSG00000024905.16	ENSMUST00000025840.16	2234	9	31	442	3	92	multi-exon	FALSE	canonical	1	2	junction_6	4.715334028465	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTATGTGTTTGCT	NA	False	NA	NA	False	CATAAA	-18	NA	3438887	3457381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3439334_3442102_3442262_3443924_3444046_3445919_3445994_3446962_3447055_3452485_3452577_3454048_3454187_3454932_3455109_3456917
Isoform_84045_33	chr19	+	2272	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237955.2	2193	4	-72	-7	6	0	multi-exon	FALSE	canonical	3	38	junction_1	122.806984962402	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758298	3767880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3758437_3764046_3764626_3765637_3765803_3766490
Isoform_84046_299	chr19	+	1880	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	1	1	1	0	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758333	3767880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
Isoform_84047_129	chr19	+	1877	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237320.2	772	4	41	-1146	1	0	multi-exon	FALSE	canonical	3	113	junction_1	87.4541149530554	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758333	3767880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3758437_3764406_3764626_3765637_3765803_3766490
Isoform_84049_5	chr19	+	1978	4	FSM	ENSMUSG00000035372.3	ENSMUST00000235837.2	1875	4	-103	0	15	0	multi-exon	FALSE	canonical	2	2	junction_1	139.776806214606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758307	3767880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3758509_3764403_3764626_3765637_3765803_3766490
Isoform_84056_9	chr19	+	2884	11	ISM	ENSMUSG00000045098.20	ENSMUST00000113973.8	6130	13	759	9471	11	2	internal_fragment	FALSE	canonical	3	50	junction_2	90.9419595126474	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTGTTTTCTTGAGT	NA	False	NA	52	True	AATAAA	-11	NA	3818179	3858831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224
Isoform_84057_7	chr19	+	3686	12	ISM	ENSMUSG00000045098.20	ENSMUST00000113973.8	6130	13	738	1997	-7	-86	3prime_fragment	FALSE	canonical	3	50	junction_2	95.0458784391225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGGTGCTTATTTTTT	NA	False	NA	NA	False	GATAAA	-17	NA	3818158	3866305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
Isoform_84058_7	chr19	+	5676	12	ISM	ENSMUSG00000045098.20	ENSMUST00000113973.8	6130	13	739	6	-6	-6	3prime_fragment	FALSE	canonical	3	50	junction_2	95.0458784391225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	3818159	3868296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
Isoform_84061_8	chr19	+	2547	9	FSM	ENSMUSG00000045098.20	ENSMUST00000005518.16	1283	9	21	-1285	5	18	multi-exon	FALSE	canonical	3	249	junction_4	20.1242235875077	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGTGGTGTACTCCTT	NA	False	NA	18	True	NA	NA	NA	3818138	3856342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916
Isoform_84062_52	chr19	+	2518	9	FSM	ENSMUSG00000045098.20	ENSMUST00000005518.16	1283	9	52	-1287	1	20	multi-exon	FALSE	canonical	3	249	junction_4	20.1242235875077	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGTGTACTCCTTTA	NA	False	NA	20	True	NA	NA	NA	3818169	3856344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916
Isoform_84065_5	chr19	+	1935	9	FSM	ENSMUSG00000045098.20	ENSMUST00000005518.16	1283	9	-245	-407	-160	1	multi-exon	FALSE	canonical	3	249	junction_4	20.1242235875077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAGAATTGACCAAAA	NA	False	NA	5	True	AATAAA	-15	NA	3817872	3855464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916
Isoform_84068_6	chr19	+	5021	9	FSM	ENSMUSG00000045098.20	ENSMUST00000005518.16	1283	9	39	-3777	8	-1	multi-exon	FALSE	canonical	3	249	junction_4	20.1242235875077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTCTTGAGTCTG	NA	False	NA	55	True	AATAAA	-14	NA	3818156	3858834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916
Isoform_84069_76	chr19	+	2837	10	FSM	ENSMUSG00000045098.20	ENSMUST00000113970.8	2975	10	137	1	1	-1	multi-exon	FALSE	canonical	3	179	junction_9	36.6093828625975	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTCTTGAGTCTG	NA	False	NA	55	True	AATAAA	-14	NA	3818169	3858834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224
Isoform_84072_12	chr19	+	3133	10	FSM	ENSMUSG00000045098.20	ENSMUST00000113970.8	2975	10	-160	2	-160	-2	multi-exon	FALSE	canonical	3	179	junction_9	36.6093828625975	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3817872	3858833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224
Isoform_84076_4	chr19	+	3907	11	ISM	ENSMUSG00000045098.20	ENSMUST00000113972.9	4159	12	453	90	-159	-90	3prime_fragment	FALSE	canonical	3	88	junction_10	64.0924332507356	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGATTGGTGCTTATT	NA	False	NA	NA	False	GATAAA	-13	NA	3817873	3866301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
Isoform_84077_55	chr19	+	5612	11	ISM	ENSMUSG00000045098.20	ENSMUST00000113972.9	4159	12	750	-1912	2	0	3prime_fragment	FALSE	canonical	3	88	junction_10	64.0924332507356	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3818170	3868303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
Isoform_84079_6	chr19	+	4056	11	ISM	ENSMUSG00000045098.20	ENSMUST00000113972.9	4159	12	699	-305	2	8	3prime_fragment	FALSE	canonical	3	88	junction_10	64.0924332507356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCACTGCATCAGTGGAC	NA	False	NA	NA	False	AATAAA	-24	NA	3818119	3866696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
Isoform_84080_4	chr19	+	5705	11	ISM	ENSMUSG00000045098.20	ENSMUST00000113972.9	4159	12	646	-1901	34	-10	3prime_fragment	FALSE	canonical	3	88	junction_10	64.0924332507356	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAATGATCTGGTCAG	NA	False	NA	NA	False	AATAAA	-7	NA	3818066	3868292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
Isoform_84081_5	chr19	+	2768	9	ISM	ENSMUSG00000045098.20	ENSMUST00000176262.8	3933	10	4	7854	1	-1	5prime_fragment	FALSE	canonical	3	16	junction_3	92.7820025651527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTCTTGAGTCTG	NA	False	NA	55	True	AATAAA	-14	NA	3818169	3858834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224
Isoform_84083_5	chr19	+	5543	10	FSM	ENSMUSG00000045098.20	ENSMUST00000176262.8	3933	10	5	-1615	2	0	multi-exon	FALSE	canonical	3	16	junction_3	99.7442408374885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3818170	3868303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
Isoform_84093_19	chr19	+	2749	14	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	87.0287308881383	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	5779	False	NA	4	True	AATAAA	-15	NA	3901831	3944367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_84095_14	chr19	+	2653	13	FSM	ENSMUSG00000024843.16	ENSMUST00000128694.8	2683	13	32	-2	-5	0	multi-exon	FALSE	canonical	3	10	junction_2	76.2468123195251	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	5752	False	NA	4	True	AATAAA	-15	NA	3901804	3944367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_84096_13	chr19	+	2712	13	FSM	ENSMUSG00000024843.16	ENSMUST00000128694.8	2683	13	-26	-3	-26	1	multi-exon	FALSE	canonical	3	10	junction_2	76.2468123195251	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	5694	False	NA	5	True	AATAAA	-16	NA	3901746	3944368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_84104_269	chr19	+	2566	12	FSM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	-244	-3	0	0	multi-exon	FALSE	canonical	3	76	junction_2	51.157187679149	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	5779	False	NA	4	True	AATAAA	-15	NA	3901831	3944367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3902414_3914647_3914760_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_84105_138	chr19	+	2601	12	FSM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	-279	-3	0	0	multi-exon	FALSE	canonical	3	76	junction_2	51.157187679149	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	5744	False	NA	4	True	AATAAA	-15	NA	3901796	3944367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3902414_3914647_3914760_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_84110_203	chr19	+	2573	11	FSM	ENSMUSG00000024843.16	ENSMUST00000072055.13	2549	11	-24	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	49.9220392211696	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	5720	False	NA	6	True	AATAAA	-17	NA	3901772	3944369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3902414_3914647_3914760_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_84123_33	chr19	+	2230	11	FSM	ENSMUSG00000036908.18	ENSMUST00000162708.7	2266	11	36	0	-4	0	multi-exon	FALSE	canonical	2	7	junction_5	6.90579466824782	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGTAGGTTGTGTTCT	5221	False	NA	NA	False	AATAAA	-20	NA	3985221	3999340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_3985353_3985761_3985904_3986268_3986423_3991519_3991682_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
Isoform_84124_14	chr19	+	2107	10	NIC	ENSMUSG00000036908.18	novel	2266	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	7.99691298464293	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGTAGGTTGTGTTCT	5182	False	NA	NA	False	AATAAA	-20	NA	3985182	3999340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_3985353_3985761_3985904_3986268_3986423_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
Isoform_84125_3	chr19	+	1308	4	ISM	ENSMUSG00000036908.18	ENSMUST00000161415.2	1668	5	1067	3	1067	-2	3prime_fragment	FALSE	canonical	3	13	junction_1	7.84573486395988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGGGTGTAGGTTGTGT	698	False	NA	NA	False	AATAAA	-17	NA	3993506	3999337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_3993712_3994022_3994297_3997006_3997126_3998627
Isoform_84126_7	chr19	+	1334	8	FSM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	-51	1	-51	-1	multi-exon	FALSE	canonical	3	15	junction_1	10.3332236114429	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGACAGTTCTTGTTCT	NA	False	NA	2	True	TATAAA	-16	NA	4036518	4040004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4036612_4036822_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
Isoform_84127_12	chr19	+	1275	8	NIC	ENSMUSG00000024866.11	novel	1284	8	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	12.795088343356	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGACAGTTCTTGTTCT	NA	False	NA	2	True	TATAAA	-16	NA	4036572	4040004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4036612_4036827_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
Isoform_84128_59	chr19	+	774	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	12	1	12	1	multi-exon	FALSE	canonical	3	59	junction_1	10.4243305140746	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGGCATCTTCCGTG	3525	False	NA	8	True	ATTAAA	-17	NA	4050591	4052102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
Isoform_84129_6	chr19	+	1009	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	-222	0	-222	0	multi-exon	FALSE	canonical	3	59	junction_1	10.4243305140746	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	3291	False	NA	9	True	ATTAAA	-18	NA	4050357	4052103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
Isoform_84130_6	chr19	+	1138	3	FSM	ENSMUSG00000110949.2	ENSMUST00000122924.2	1082	3	-55	-1	-4	1	multi-exon	FALSE	canonical	3	76	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGGCATCTTCCGTG	3509	False	NA	8	True	ATTAAA	-17	NA	4050575	4052102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4051329_4051627_4051706_4051795
Isoform_84131_7	chr19	+	1307	2	ISM	ENSMUSG00000024856.11	ENSMUST00000174799.2	843	4	-5	-2	-4	2	intron_retention	FALSE	canonical	3	655	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCAGCCTTTCTGTGTG	7091	False	NA	29	True	AATAAA	-18	NA	4147396	4149012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_4147508_4147816
Isoform_84132_27	chr19	+	901	4	FSM	ENSMUSG00000024856.11	ENSMUST00000174799.2	843	4	-55	-3	-54	3	multi-exon	FALSE	canonical	3	61	junction_2	272.140078309356	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCAGCCTTTCTGTGTGT	7041	False	NA	30	True	AATAAA	-19	NA	4147346	4149013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4147508_4147816_4147908_4148004_4148138_4148497
Isoform_84135_518	chr19	+	909	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	165	6	-54	1	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCAGCCTTTCTGTGT	7041	False	NA	28	True	AATAAA	-17	NA	4147346	4149011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
Isoform_84136_25	chr19	+	1402	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	-320	-2	-320	0	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTGTGTGTGGTTCC	6556	False	NA	36	True	AATAAA	-25	NA	4146861	4149019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
Isoform_84140_11	chr19	+	1135	4	FSM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	-54	8	-54	1	multi-exon	TRUE	canonical	3	90	junction_1	272.960721635102	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCAGCCTTTCTGTGT	7041	False	NA	28	True	AATAAA	-17	NA	4147346	4149011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4147734_4147816_4147918_4148004_4148138_4148497
Isoform_84141_35	chr19	+	1078	4	FSM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	11	0	10	0	multi-exon	FALSE	canonical	3	90	junction_1	272.960721635102	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTGTGTGTGGTTCC	7106	False	NA	36	True	AATAAA	-25	NA	4147411	4149019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4147734_4147816_4147918_4148004_4148138_4148497
Isoform_84143_9	chr19	+	4192	24	FSM	ENSMUSG00000024851.15	ENSMUST00000049658.14	4206	24	14	0	14	0	multi-exon	FALSE	canonical	1	1	junction_9	2.52323793539946	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGGCCTTCCTGTCTGG	1321	False	NA	NA	False	AATAAA	-14	NA	4150011	4163965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4150214_4151143_4151263_4152672_4152888_4152974_4153097_4153260_4153486_4154813_4155141_4155229_4155326_4155414_4155523_4156563_4156626_4156711_4156963_4157785_4157976_4158085_4158194_4158422_4158581_4158664_4158868_4159825_4159997_4160494_4160660_4160841_4160991_4161078_4161190_4161581_4161699_4161865_4162015_4162100_4162251_4162326_4162511_4162747_4162877_4163484
Isoform_84144_230	chr19	+	934	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	5	-1	4	1	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGACAGTTGCACTTTC	4375	False	NA	NA	False	AATAAA	-17	NA	4175963	4181727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_84145_6	chr19	+	1501	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	22	-585	2	5	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGCTCACAGCAGTTCA	4392	False	NA	NA	False	AATAAA	-35	NA	4175980	4182311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_84146_60	chr19	+	890	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	8	574	-7	1	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTGCACTTTCCTGGG	4379	False	NA	NA	False	AATAAA	-22	NA	4175967	4181732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
Isoform_84147_6	chr19	+	1469	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	3	0	3	0	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATCTGAGCTCACAGCA	4374	False	NA	NA	False	AATAAA	-30	NA	4175962	4182306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
Isoform_84149_23	chr19	+	1064	6	FSM	ENSMUSG00000024845.20	ENSMUST00000130619.11	1615	6	-3	554	-2	-1	multi-exon	FALSE	canonical	3	568	junction_2	76.3952878127964	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4368	False	NA	NA	False	AATAAA	-20	NA	4175956	4181730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_84150_13	chr19	+	1008	5	FSM	ENSMUSG00000024845.20	ENSMUST00000139718.10	1012	5	9	-5	-7	-1	multi-exon	FALSE	canonical	3	226	junction_3	207.505421615918	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4379	False	NA	NA	False	AATAAA	-20	NA	4175967	4181730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181227_4181282_4181360
Isoform_84152_7	chr19	+	1471	7	FSM	ENSMUSG00000024845.20	ENSMUST00000148807.11	937	7	3	-537	3	-13	multi-exon	FALSE	canonical	3	163	junction_2	194.337907321815	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAAAATAAACAAA	4393	False	NA	NA	False	NA	NA	NA	4175981	4182271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_84153_67	chr19	+	942	7	FSM	ENSMUSG00000024845.20	ENSMUST00000148807.11	937	7	-9	4	-5	-1	multi-exon	FALSE	canonical	3	163	junction_2	194.337907321815	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4381	False	NA	NA	False	AATAAA	-20	NA	4175969	4181730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_84154_29	chr19	+	897	6	FSM	ENSMUSG00000024845.20	ENSMUST00000140405.10	874	6	-19	-4	-5	-1	multi-exon	FALSE	canonical	3	163	junction_2	248.896283620306	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4381	False	NA	NA	False	AATAAA	-20	NA	4175969	4181730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181227_4181282_4181360
Isoform_84155_10	chr19	+	1065	6	NIC	ENSMUSG00000024845.20	novel	937	7	NA	NA	4	1	intron_retention	FALSE	canonical	3	163	junction_2	211.997735836966	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGACAGTTGCACTTTC	4375	False	NA	NA	False	AATAAA	-17	NA	4175963	4181727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4176200_4177055_4177132_4177548_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_84156_7	chr19	+	1030	5	NIC	ENSMUSG00000024845.20	novel	874	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	163	junction_2	269.816025283896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4364	False	NA	NA	False	AATAAA	-16	NA	4175952	4181726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4176200_4177055_4177132_4177548_4177836_4181227_4181282_4181360
Isoform_84159_211	chr19	+	1837	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	140.317354593079	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3612	False	NA	18	True	AATAAA	-19	NA	4198654	4204034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_84160_54	chr19	+	1864	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	4	-4	combination_of_known_junctions	TRUE	canonical	3	159	junction_1	140.317354593079	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3579	False	NA	12	True	AATAAA	-13	NA	4198621	4204028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_84162_36	chr19	+	2592	9	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	1	-4	intron_retention	FALSE	canonical	3	402	junction_1	84.6935652809586	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3611	False	NA	12	True	AATAAA	-13	NA	4198653	4204028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
Isoform_84163_20	chr19	+	1946	10	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	0	-4	intron_retention	FALSE	canonical	3	402	junction_1	79.8759841223016	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3610	False	NA	12	True	AATAAA	-13	NA	4198652	4204028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225
Isoform_84164_729	chr19	+	1840	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	402	junction_1	75.9439925208044	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3610	False	NA	12	True	AATAAA	-13	NA	4198652	4204028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_84165_82	chr19	+	1877	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	402	junction_1	75.9439925208044	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3579	False	NA	18	True	AATAAA	-19	NA	4198621	4204034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_84172_382	chr19	+	1847	11	FSM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	35	6	0	-4	multi-exon	FALSE	canonical	3	251	junction_1	114.751906302248	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3610	False	NA	12	True	AATAAA	-13	NA	4198652	4204028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_84173_54	chr19	+	1884	11	FSM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	4	0	4	0	multi-exon	FALSE	canonical	3	251	junction_1	114.751906302248	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3579	False	NA	18	True	AATAAA	-19	NA	4198621	4204034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_8418_2288	chr10	+	1374	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	40	639	-29	-16	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	2288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTATGGTCTTTATTTT	NA	False	NA	13	True	AAAACA	-11	NA	126899442	126903150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
Isoform_84185_7041	chr19	+	1369	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	104	0	-4	0	multi-exon	TRUE	canonical	3	3675	junction_3	183.825475806689	7041	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3381	False	NA	31	True	AATAAA	-20	NA	4242167	4245419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
Isoform_8419_3872	chr10	+	1342	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	72	639	2	-16	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	3872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTATGGTCTTTATTTT	NA	False	NA	13	True	AAAACA	-11	NA	126899474	126903150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
Isoform_8420_123	chr10	+	1443	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	-29	639	-29	-16	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTATGGTCTTTATTTT	NA	False	NA	13	True	AAAACA	-11	NA	126899373	126903150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
Isoform_84208_16	chr19	+	864	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	47	2	-40	1	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACCTTACATCTCT	NA	False	NA	4	True	AATAAA	-16	NA	4281999	4283686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
Isoform_84209_14	chr19	+	902	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	9	2	9	1	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACCTTACATCTCT	NA	False	NA	4	True	AATAAA	-16	NA	4281961	4283686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
Isoform_84211_167	chr19	+	4017	21	FSM	ENSMUSG00000024892.18	ENSMUST00000224726.3	4061	21	42	2	2	-2	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGTCATGTACAGTCT	1743	False	NA	8	True	AATAAA	-23	NA	4560555	4671705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
Isoform_84214_11	chr19	+	4050	21	FSM	ENSMUSG00000024892.18	ENSMUST00000224726.3	4061	21	37	-26	-3	7	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGACAGTGTGGGTGTA	1738	False	NA	36	True	NA	NA	NA	4560550	4671733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
Isoform_84223_8	chr19	+	8084	36	NIC	ENSMUSG00000067889.8	novel	953	5	NA	NA	4	-8	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	9.77443562753035	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCCTCTGGGTGTTGT	NA	False	NA	5	True	ATTAAA	-15	NA	4771110	4802380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4771561_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
Isoform_84227_21	chr19	+	1835	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-13	2372	9	-1731	multi-exon	FALSE	canonical	3	81	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAATGCTATTTGCAA	NA	False	NA	NA	False	AATAAA	-15	NA	4806579	4808998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4806690_4807273
Isoform_84228_7	chr19	+	2440	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-19	1773	3	-1132	multi-exon	FALSE	canonical	3	81	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAATCATTTATTAGT	NA	False	NA	NA	False	AATAAA	-9	NA	4806573	4809597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4806690_4807273
Isoform_84229_8	chr19	+	2114	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-19	2099	3	-1458	multi-exon	FALSE	canonical	3	81	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAATTTGCAACTGAAAT	NA	False	NA	NA	False	NA	NA	NA	4806573	4809271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4806690_4807273
Isoform_84231_5	chr19	+	4523	3	FSM	ENSMUSG00000033760.18	ENSMUST00000182821.8	1443	3	-7	-3073	-7	9	multi-exon	FALSE	canonical	3	52	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGGCCATTATTTA	NA	False	NA	NA	False	AATAAA	-26	NA	4806563	4815977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4806690_4807273_4807698_4812004
Isoform_84232_50	chr19	+	1801	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	-19	1	9	-1	multi-exon	FALSE	canonical	3	32	junction_3	20.1163283594862	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTCTTAACTGAGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	4806579	4815967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
Isoform_84235_196	chr19	+	1882	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	93	5	2	2	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTGGTGTAAGTGCT	NA	False	NA	5	True	AATAAA	-16	NA	4905250	4910941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
Isoform_84236_31	chr19	+	1973	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	1	6	1	1	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGTGTAAGTGC	NA	False	NA	4	True	AATAAA	-15	NA	4905158	4910940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
Isoform_84238_4	chr19	+	1893	14	NIC	ENSMUSG00000083282.4	novel	1980	14	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	27.6749945879631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGTGTAAGTGC	NA	False	NA	4	True	AATAAA	-15	NA	4905250	4910940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_4905515_4905725_4905837_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
Isoform_84239_13	chr19	+	2229	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162088.8	2269	3	36	4	0	-2	multi-exon	FALSE	canonical	2	7	junction_1	79	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCATGTCTTTTTGTTT	NA	False	NA	18	True	NA	NA	NA	4928731	4935421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4928765_4930148_4930427_4933503
Isoform_8424_96	chr10	+	2065	7	FSM	ENSMUSG00000006728.13	ENSMUST00000140254.8	2038	7	-43	16	-32	-16	multi-exon	FALSE	canonical	3	4641	junction_3	424.742274797318	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTATGGTCTTTATTTT	NA	False	NA	13	True	AAAACA	-11	NA	126899439	126903150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
Isoform_84240_26	chr19	+	2297	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162134.2	2314	3	15	2	1	-2	multi-exon	FALSE	canonical	3	16	junction_1	74.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCATGTCTTTTTGTTT	NA	False	NA	18	True	NA	NA	NA	4928732	4935421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4928834_4930148_4930427_4933503
Isoform_84243_22	chr19	+	2538	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	10	10	-8	-8	multi-exon	TRUE	canonical	3	97	junction_1	34	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAAAGATCATGTCTTT	NA	False	NA	12	True	NA	NA	NA	4928709	4935415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4929058_4930148_4930427_4933503
Isoform_84244_164	chr19	+	2521	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	33	4	1	-2	multi-exon	FALSE	canonical	3	97	junction_1	34	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCATGTCTTTTTGTTT	NA	False	NA	18	True	NA	NA	NA	4928732	4935421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4929058_4930148_4930427_4933503
Isoform_84249_43	chr19	+	3613	2	FSM	ENSMUSG00000006463.14	ENSMUST00000162754.2	939	2	-1063	-1611	0	-2	multi-exon	FALSE	canonical	3	165	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCATGTCTTTTTGTTT	NA	False	NA	18	True	NA	NA	NA	4928731	4935421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_4930427_4933503
Isoform_84250_14	chr19	+	950	6	NNC	ENSMUSG00000024902.6	novel	3045	5	NA	NA	-7	204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	238.556995286242	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTGCTGGAGTATG	3752	False	NA	NA	False	NA	NA	NA	5012383	5015176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701_5014998_5015032
Isoform_84251_412	chr19	+	784	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	209	2052	-7	3	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCAGCTTCTCTCCTGA	3752	False	NA	13	True	AATAAA	-16	NA	5012383	5014975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
Isoform_84252_6	chr19	+	2273	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	174	598	-9	-598	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAAACTTGCTGGTTTT	3717	False	NA	NA	False	NA	NA	NA	5012348	5016429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
Isoform_84253_9	chr19	+	842	5	FSM	ENSMUSG00000024902.6	ENSMUST00000236917.2	813	5	-26	-3	-8	3	multi-exon	FALSE	canonical	2	9	junction_4	253.71871728353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCAGCTTCTCTCCTGA	3718	False	NA	13	True	AATAAA	-16	NA	5012349	5014975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013718_5014701
Isoform_84254_94	chr19	+	2402	12	FSM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	213	4	2	-1	multi-exon	FALSE	canonical	3	72	junction_1	10.4311992290135	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTCCTGGAGTGTTCAC	4271	False	NA	17	True	ATTAAA	-18	NA	5074100	5081996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_84255_121	chr19	+	2365	12	FSM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	251	3	-3	0	multi-exon	FALSE	canonical	3	72	junction_1	10.4311992290135	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4309	False	NA	18	True	ATTAAA	-19	NA	5074138	5081997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_84257_4	chr19	+	2388	12	FSM	ENSMUSG00000024891.7	ENSMUST00000025826.7	2401	12	11	2	11	-2	multi-exon	FALSE	canonical	1	4	junction_10	25.5138918569071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGATTCCTGGAGTGTTCA	4280	False	NA	16	True	ATTAAA	-17	NA	5074109	5081995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080319_5080519_5081029
Isoform_84258_32	chr19	+	2269	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	23.4795655837156	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4270	False	NA	18	True	ATTAAA	-19	NA	5074099	5081997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_84259_5	chr19	+	2228	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_2	26.9770272639518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACGGATTCCTGGAGTGT	4280	False	NA	13	True	ATTAAA	-14	NA	5074109	5081992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5074306_5074538_5074621_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_84260_25	chr19	+	2279	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	24.5063257139866	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACGGATTCCTGGAGTGTT	4309	False	NA	14	True	ATTAAA	-15	NA	5074138	5081993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5074306_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_84262_190	chr19	+	1987	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	45	0	-36	0	multi-exon	FALSE	canonical	3	75	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCTGTTACTCTC	247	False	NA	9	True	AATAAA	-16	NA	5088898	5091159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5090061_5090334
Isoform_84266_388	chr19	+	1371	10	FSM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	12	5	12	-5	multi-exon	FALSE	canonical	3	224	junction_4	16.1528195757556	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGGCTGATGTGT	2742	False	NA	3	True	AATAAA	-14	NA	5091393	5099940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
Isoform_84268_10	chr19	+	1462	10	NIC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	76.2029454082248	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGGCTGATGTGT	2772	False	NA	3	True	AATAAA	-14	NA	5091423	5099940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5091640_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
Isoform_84270_11	chr19	+	4384	10	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	82	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	8.35330939076111	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGCTTGATAACTAGAA	NA	False	NA	4	True	NA	NA	NA	5100590	5107099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5100900_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
Isoform_84271_19	chr19	+	4446	10	FSM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	-262	0	90	0	multi-exon	FALSE	canonical	3	10	junction_1	7.87557562074193	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGCTTGATAACTAGAA	NA	False	NA	4	True	NA	NA	NA	5100598	5107099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
Isoform_84274_293	chr19	+	1113	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	-2	377	-2	-1	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTTGACCCTGGTTC	NA	False	NA	25	True	NA	NA	NA	5138570	5142532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
Isoform_84276_5	chr19	+	1470	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	16	2	1	-2	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTTATTCATATTTTG	NA	False	NA	NA	False	GGGGCT	-12	NA	5138588	5142907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
Isoform_84278_3	chr19	+	2463	3	FSM	ENSMUSG00000047658.7	ENSMUST00000061169.7	2421	3	-45	3	-45	-3	multi-exon	FALSE	canonical	2	5	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGCAGGGTGTATGTCA	NA	False	NA	NA	False	AATAAA	-11	NA	5348313	5358763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5348529_5352463_5352700_5356751
Isoform_84279_107	chr19	+	2270	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	271	15	-10	-15	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAACTTCTCTGAATTT	2063	False	NA	8	True	AATAAA	-25	NA	5417039	5421539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_84281_91	chr19	+	1218	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	62	1276	62	-1276	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCTGAGTGGCTCTC	1854	False	NA	24	True	ATTAAA	-24	NA	5416830	5420278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_84282_450	chr19	+	1037	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	241	1278	37	-1278	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTCTGAGTGGCTC	2033	False	NA	22	True	ATTAAA	-22	NA	5417009	5420276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_84284_14	chr19	+	1305	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	-25	1276	-25	-1276	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCTGAGTGGCTCTC	1767	False	NA	24	True	ATTAAA	-24	NA	5416743	5420278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_84286_12	chr19	+	1617	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	-337	1276	-337	-1276	multi-exon	TRUE	canonical	3	703	junction_2	59.7581793564697	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCTGAGTGGCTCTC	1455	False	NA	24	True	ATTAAA	-24	NA	5416431	5420278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_84287_32	chr19	+	2495	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	62	-1	62	1	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTATGAAGAGTTT	1854	False	NA	24	True	AATAAA	-41	NA	5416830	5421555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_84298_16	chr19	+	1522	2	FSM	ENSMUSG00000047423.11	ENSMUST00000054477.8	1529	2	9	-2	9	2	multi-exon	FALSE	canonical	3	21	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTCCTGATGGTTAT	269	False	NA	36	True	AATAAA	-37	NA	5475193	5477343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5475337_5475964
Isoform_84299_182	chr19	+	1514	2	FSM	ENSMUSG00000047423.11	ENSMUST00000159759.3	1528	2	15	-1	2	1	multi-exon	FALSE	canonical	3	164	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGTCCTGATGGTTA	262	False	NA	35	True	AATAAA	-36	NA	5475186	5477342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5475337_5475978
Isoform_84302_5	chr19	+	2098	7	ISM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	-1	1	0	0	intron_retention	FALSE	canonical	3	126	junction_5	12.3107902084129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGGTCCTTGTTCCAG	NA	False	NA	16	True	AATAAA	-16	NA	5510642	5515078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814
Isoform_84303_176	chr19	+	1209	10	FSM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	1	-1	1	1	multi-exon	FALSE	canonical	3	126	junction_5	12.1837779216647	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	18	True	AATAAA	-18	NA	5510644	5515080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
Isoform_84304_13	chr19	+	1485	9	NIC	ENSMUSG00000024911.8	novel	1209	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	126	junction_5	11.4455231422596	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGGTCCTTGTTCCA	NA	False	NA	15	True	AATAAA	-15	NA	5510643	5515077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5514244_5514361_5514460_5514952
Isoform_84305_69	chr19	+	1230	10	FSM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	-12	-3	1	1	multi-exon	FALSE	canonical	3	40	junction_5	35.2423706830007	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	18	True	AATAAA	-18	NA	5510644	5515080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
Isoform_84306_6	chr19	+	1508	9	NIC	ENSMUSG00000024911.8	novel	1215	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_5	37.3019771593946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGGTCCTTGTTCCAG	NA	False	NA	16	True	AATAAA	-16	NA	5510642	5515078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5514244_5514361_5514460_5514952
Isoform_84307_10	chr19	+	1839	11	NIC	ENSMUSG00000024909.16	novel	2634	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	23.0008695487801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	10	True	AATAAA	-15	NA	5523982	5531881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5524352_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
Isoform_84308_58	chr19	+	1543	11	FSM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	14	0	-5	0	multi-exon	FALSE	canonical	3	63	junction_1	7.8873316146844	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	10	True	AATAAA	-15	NA	5524729	5531881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
Isoform_84311_3	chr19	+	2567	10	FSM	ENSMUSG00000024909.16	ENSMUST00000070118.14	1781	10	-795	9	1	-9	multi-exon	FALSE	canonical	3	69	junction_4	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGAGTCCTGGCTGA	NA	False	NA	1	True	AATAAA	-6	NA	5523982	5531872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
Isoform_84314_8798	chr19	+	1114	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	69	1171	8	1	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	8798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGGCTTTTGGGTTTGGG	NA	False	NA	13	True	NA	NA	NA	5540551	5544058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
Isoform_84326_10	chr19	+	2800	3	FSM	ENSMUSG00000049562.7	ENSMUST00000235575.2	2785	3	-16	1	-16	-1	multi-exon	FALSE	canonical	0	0	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCTCCTGGCCTGTTTT	7950	False	NA	NA	False	NA	NA	NA	5618036	5621288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5618112_5618467_5618636_5618731
Isoform_84327_6	chr19	+	960	2	FSM	ENSMUSG00000024925.12	ENSMUST00000127071.2	869	2	-23	-68	-9	1	multi-exon	FALSE	canonical	3	310	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAGTCTGTGGGCAC	5036	False	NA	5	True	AATAAA	-14	NA	5651891	5652963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5652109_5652220
Isoform_84328_11	chr19	+	884	3	FSM	ENSMUSG00000024925.12	ENSMUST00000155639.2	771	3	-111	-2	-9	0	multi-exon	FALSE	canonical	3	241	junction_2	34.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGTCTGTGGGCA	5036	False	NA	4	True	AATAAA	-13	NA	5651891	5652962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5652109_5652220_5652403_5652477
Isoform_84329_162	chr19	+	630	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	-8	504	-8	1	multi-exon	FALSE	canonical	3	228	junction_3	35.9845645921816	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAGTCTGTGGGCAC	5037	False	NA	5	True	AATAAA	-14	NA	5651892	5652963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
Isoform_84332_197	chr19	+	2457	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	259	0	23	0	multi-exon	FALSE	canonical	3	73	junction_5	8.59069263796581	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687769	5698158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
Isoform_84334_42	chr19	+	2703	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	13	0	13	0	multi-exon	FALSE	canonical	3	73	junction_5	8.59069263796581	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687523	5698158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
Isoform_84337_10	chr19	+	2577	11	NIC	ENSMUSG00000024927.9	novel	786	5	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	26.9287949971773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687956	5698158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5688177_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
Isoform_84342_55	chr19	+	3754	12	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	20.4999496068721	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAATGTCACCTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	5738770	5752891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5738859_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_84343_17	chr19	+	2452	11	NIC	ENSMUSG00000004054.10	novel	441	3	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	27.36439292219	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAATGTCACCTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	5738772	5752891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_5738859_5739504_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_84344_4	chr19	+	3910	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6799209484995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGTAATGTCACCTTT	NA	False	NA	5	True	AATAAA	-17	NA	5738772	5752888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_5738859_5739343_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_84345_13	chr19	+	3852	12	FSM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	42	4	42	4	multi-exon	FALSE	canonical	3	4	junction_1	25.7338571721901	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTAATGTCACCTTTC	NA	False	NA	6	True	AATAAA	-18	NA	5739106	5752889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5739295_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_84351_67	chr19	+	3562	10	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	720	2	623	-2	3prime_fragment	FALSE	canonical	3	57	junction_1	13.4577528254576	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAATGTCACCTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	5739784	5752891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_84353_3	chr19	+	3731	10	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	550	3	453	-3	3prime_fragment	FALSE	canonical	3	57	junction_1	13.4577528254576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5739614	5752890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_84356_6	chr19	+	2083	6	FSM	ENSMUSG00000024818.16	ENSMUST00000025732.14	2480	6	397	0	353	0	multi-exon	FALSE	canonical	1	1	junction_4	2.63818119165458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATGATCCCTTTCTGT	3263	False	NA	NA	False	AATAAA	-17	NA	5928241	5935794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5930467_5930654_5934372_5934632_5934750
Isoform_84357_3	chr19	+	2524	6	FSM	ENSMUSG00000024818.16	ENSMUST00000025732.14	2480	6	-45	1	-36	-1	multi-exon	FALSE	canonical	1	1	junction_4	2.63818119165458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGATGATCCCTTTCTG	2821	False	NA	NA	False	AATAAA	-16	NA	5927799	5935793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5930467_5930654_5934372_5934632_5934750
Isoform_84359_6	chr19	+	747	2	FSM	ENSMUSG00000110156.3	ENSMUST00000209642.2	647	2	136	-236	5	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCACACTACACAGCGG	9360	False	NA	3	True	NA	NA	NA	5962985	5964857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5963101_5964225
Isoform_84360_6	chr19	+	1257	2	NNC	ENSMUSG00000110156.3	novel	647	2	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTAAGCTCACACTAC	9359	False	NA	-4	True	NA	NA	NA	5962984	5964850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_5963101_5963709
Isoform_84362_5	chr19	+	3254	16	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	31.1593752611741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAGAACGTGTCACCTA	802	False	NA	13	True	AATAAA	-16	NA	6096668	6103742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6097012_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
Isoform_84364_17	chr19	+	3067	15	ISM	ENSMUSG00000024807.19	ENSMUST00000156550.8	3363	16	382	-6	-17	3	intron_retention	FALSE	canonical	3	88	junction_11	13.7605247289602	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAACGTGTCACCTAGGG	1207	False	NA	16	True	AATAAA	-19	NA	6097073	6103745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357
Isoform_84365_311	chr19	+	2975	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	489	0	0	0	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAGAACGTGTCACCTA	1228	False	NA	13	True	AATAAA	-16	NA	6097094	6103742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
Isoform_84367_11	chr19	+	3456	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	6	2	6	1	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTAGAACGTGTCACC	745	False	NA	11	True	AATAAA	-14	NA	6096611	6103740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
Isoform_84371_3200	chr19	+	548	5	FSM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	65	0	-33	0	multi-exon	FALSE	canonical	3	11442	junction_1	1294.53167207295	3200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1047	False	NA	4	True	AATAAA	-16	NA	6107938	6109549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
Isoform_84372_48	chr19	+	592	5	FSM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	21	0	21	0	multi-exon	FALSE	canonical	3	11442	junction_1	1294.53167207295	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1003	False	NA	4	True	AATAAA	-16	NA	6107894	6109549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
Isoform_84374_383	chr19	+	503	5	FSM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	8	-3	0	0	multi-exon	FALSE	canonical	3	1236	junction_1	5677.26170790109	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1089	False	NA	4	True	AATAAA	-16	NA	6107980	6109549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6108032_6108275_6108356_6108457_6108603_6109173_6109230_6109378
Isoform_84382_862	chr19	+	1934	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	86	4	86	-4	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCAGACTGCTTTT	NA	False	NA	31	True	AATAAA	-16	NA	6135098	6141803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
Isoform_84383_28	chr19	+	2002	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	18	4	18	-4	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCAGACTGCTTTT	NA	False	NA	31	True	AATAAA	-16	NA	6135030	6141803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
Isoform_84384_44	chr19	+	3233	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	64	-1273	64	1273	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTTTACATGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	6135076	6143080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
Isoform_84389_12	chr19	+	1697	11	FSM	ENSMUSG00000024786.10	ENSMUST00000113528.2	1562	11	-130	-5	-51	5	multi-exon	FALSE	canonical	3	12	junction_2	3.41906419945575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTGAGGTTTAAGCCT	7987	False	NA	15	True	AATAAA	-31	NA	6234366	6274260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6234613_6245693_6245811_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
Isoform_84391_9	chr19	+	1580	10	NIC	ENSMUSG00000024786.10	novel	1562	11	NA	NA	-52	4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4.54062594260057	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTGAGGTTTAAGCC	7986	False	NA	14	True	AATAAA	-30	NA	6234365	6274259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6234613_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
Isoform_84392_6	chr19	+	3341	18	ISM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	4	10033	4	7	5prime_fragment	FALSE	canonical	3	75	junction_9	12.0109523260459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAGCACGTGGTGCAAA	8948	False	NA	NA	False	NA	NA	NA	6291701	6302332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735
Isoform_84394_55	chr19	+	6289	40	FSM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	46	36	46	4	multi-exon	TRUE	canonical	3	75	junction_9	16.8787297726361	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGTCCAGGTCCTCT	8990	False	NA	19	True	AATAAA	-19	NA	6291743	6312329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
Isoform_84395_15	chr19	+	6281	40	NIC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	22.3891821346849	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCCACGTCCAGGTC	9000	False	NA	15	True	AATAAA	-15	NA	6291753	6312325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305302_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
Isoform_84396_5	chr19	+	2998	19	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	41	7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	26.08160271149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAGCACGTGGTGCAAA	8985	False	NA	NA	False	NA	NA	NA	6291738	6302332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302199
Isoform_84400_962	chr19	+	3193	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	155	5	-45	-5	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTCATGCTCCCTTG	NA	False	NA	11	True	ATTAAA	-19	NA	6326909	6350121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
Isoform_84403_54	chr19	+	3354	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	-9	8	-9	-8	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCTCTCATGCTCCC	NA	False	NA	8	True	ATTAAA	-16	NA	6326745	6350118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
Isoform_84404_29	chr19	+	2210	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	-54	1197	-54	539	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTTCTTGCCTCTTC	NA	False	NA	18	True	AATATA	-15	NA	6326700	6348929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
Isoform_84406_58	chr19	+	2165	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	-9	1197	-9	539	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTTCTTGCCTCTTC	NA	False	NA	18	True	AATATA	-15	NA	6326745	6348929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
Isoform_84429_355	chr19	+	2595	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113502.10	2652	10	61	-4	0	4	multi-exon	TRUE	canonical	3	66	junction_1	106.997403914508	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGATGTATGTAT	615	False	NA	16	True	GATAAA	-16	NA	6385069	6390914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
Isoform_84432_474	chr19	+	2589	10	FSM	ENSMUSG00000024947.18	ENSMUST00000079327.12	2639	10	45	5	-6	4	multi-exon	FALSE	canonical	3	89	junction_1	99.9901229690114	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGATGTATGTAT	633	False	NA	16	True	GATAAA	-16	NA	6385087	6390914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
Isoform_84436_851	chr19	+	2952	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	18	5	-7	4	multi-exon	FALSE	canonical	3	360	junction_3	26.9153766460735	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGATGTATGTAT	632	False	NA	16	True	GATAAA	-16	NA	6385086	6390914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
Isoform_84452_8	chr19	+	4619	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	29	-4	-2	4	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTTGTGAGGATCAAT	1420	False	NA	NA	False	NA	NA	NA	6391218	6405649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
Isoform_84453_31	chr19	+	2860	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	43	1741	-5	6	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTCTCTGAGGTAGAG	1434	False	NA	16	True	ATTAAA	-20	NA	6391232	6403904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
Isoform_84456_198	chr19	+	3514	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	8	831	8	-3	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	610	False	NA	18	True	AATAAA	-18	NA	6413727	6427229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
Isoform_84457_908	chr19	+	3274	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	244	835	12	-1	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	846	False	NA	14	True	AATAAA	-14	NA	6413963	6427225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
Isoform_84468_503	chr19	+	2648	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	1	0	1	0	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	835	False	NA	15	True	AATAAA	-15	NA	6413952	6427226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
Isoform_84469_117	chr19	+	2874	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	-224	-1	8	1	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	610	False	NA	16	True	AATAAA	-16	NA	6413727	6427227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
Isoform_84479_73	chr19	+	3274	13	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	12	-2	intron_retention	FALSE	canonical	3	160	junction_10	310.864777229943	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCCGTTTCTTTTCTTTT	846	False	NA	19	True	AATAAA	-19	NA	6413963	6427230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424583_6424639_6424748_6424929_6425687
Isoform_84483_76	chr19	+	2632	13	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	15	-3	combination_of_known_junctions	FALSE	canonical	3	160	junction_10	355.987622678093	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	849	False	NA	18	True	AATAAA	-18	NA	6413966	6427229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424583_6424639_6424748_6424929_6426325
Isoform_84487_55	chr19	+	3280	13	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	11	0	intron_retention	FALSE	canonical	3	98	junction_10	326.079521231657	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	845	False	NA	15	True	AATAAA	-15	NA	6413962	6427226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6425687
Isoform_84492_57	chr19	+	2647	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	212	4	9	-3	multi-exon	FALSE	canonical	3	98	junction_10	368.940026366828	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	843	False	NA	18	True	AATAAA	-18	NA	6413960	6427229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
Isoform_84538_20	chr19	+	2853	20	FSM	ENSMUSG00000032648.15	ENSMUST00000035269.15	2874	20	18	3	2	-3	multi-exon	TRUE	canonical	1	1	junction_8	7.04005162408672	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTCTCTGTTGCAAA	NA	False	NA	11	True	AATAAA	-21	NA	6434446	6448486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6434752_6435714_6435817_6435895_6435975_6436053_6436158_6436403_6436536_6438092_6438205_6438296_6438380_6438766_6438911_6439189_6439283_6439485_6439633_6439802_6439967_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
Isoform_84539_8	chr19	+	568	5	NIC	ENSMUSG00000032946.17	novel	573	5	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	118.986081118759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAGGGTCATGTCAC	NA	False	NA	13	True	NA	NA	NA	6449499	6453667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6449548_6451745_6451894_6452501_6452605_6453053_6453117_6453461
Isoform_8454_8	chr10	+	344	2	FSM	ENSMUSG00000112639.2	ENSMUST00000217874.2	329	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	25	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTCTCTTTTTAAATTT	NA	False	NA	NA	False	AATAAA	-13	NA	126906334	126906970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_126906494_126906785
Isoform_84540_4	chr19	+	623	5	FSM	ENSMUSG00000032946.17	ENSMUST00000113475.8	573	5	-46	-4	-46	-1	multi-exon	FALSE	canonical	0	0	junction_3	121.807994401024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAGGGTCATGTCAC	NA	False	NA	13	True	NA	NA	NA	6449439	6453667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6449548_6451750_6451894_6452501_6452605_6453053_6453117_6453461
Isoform_84541_61	chr19	+	621	5	NIC	ENSMUSG00000032946.17	novel	648	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.357558422953	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAGGGTCATGTCAC	NA	False	NA	13	True	NA	NA	NA	6449893	6453667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6449995_6451745_6451894_6452501_6452605_6453053_6453117_6453461
Isoform_84542_5	chr19	+	2235	17	NIC	ENSMUSG00000032946.17	novel	919	7	NA	NA	-14	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	85.6383885518054	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGATCATCAGCCTAAAA	NA	False	NA	16	True	AATAAA	-18	NA	6449879	6465237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6449995_6451745_6451894_6452501_6452605_6453053_6453117_6453461_6453594_6454329_6454481_6454683_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_84543_14	chr19	+	601	5	FSM	ENSMUSG00000032946.17	ENSMUST00000150713.8	453	5	11	-159	5	-1	multi-exon	TRUE	canonical	0	0	junction_3	119.445332684036	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAGGGTCATGTCAC	NA	False	NA	13	True	NA	NA	NA	6449908	6453667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6449995_6451750_6451894_6452501_6452605_6453053_6453117_6453461
Isoform_84545_61	chr19	+	531	4	FSM	ENSMUSG00000032946.17	ENSMUST00000113471.3	535	4	3	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_2	116.70761186258	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAGGGTCATGTCAC	NA	False	NA	13	True	NA	NA	NA	6451734	6453667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6451894_6452501_6452605_6453053_6453117_6453461
Isoform_84547_6	chr19	+	2133	16	ISM	ENSMUSG00000032946.17	ENSMUST00000167240.8	2192	17	1126	2	7	2	3prime_fragment	FALSE	canonical	0	0	junction_2	88.3572043217504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6451738	6465243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_6451894_6452501_6452605_6453053_6453117_6453461_6453594_6454329_6454481_6454683_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_84550_8	chr19	+	1145	9	ISM	ENSMUSG00000032946.17	ENSMUST00000167240.8	2192	17	6551	2	-1271	2	3prime_fragment	FALSE	canonical	3	20	junction_1	64.9576785299475	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6457163	6465243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_84552_67	chr19	+	653	5	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	4666	-2	4666	2	3prime_fragment	FALSE	canonical	3	149	junction_1	9.57535900110278	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6463100	6465243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_84554_16	chr19	+	747	5	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	4566	4	4566	2	3prime_fragment	FALSE	canonical	3	149	junction_1	9.57535900110278	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGATCATCAGCCTAAAA	NA	False	NA	16	True	AATAAA	-18	NA	6463000	6465237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_84555_3	chr19	+	779	4	NIC	ENSMUSG00000032946.17	novel	919	7	NA	NA	4736	-2	intron_retention	FALSE	canonical	3	164	junction_1	5.65685424949238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGATCATCAGCCTAAAAC	NA	False	NA	17	True	AATAAA	-19	NA	6463170	6465238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_84556_6	chr19	+	559	3	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	5355	4	5355	2	3prime_fragment	FALSE	canonical	3	164	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGATCATCAGCCTAAAA	NA	False	NA	16	True	AATAAA	-18	NA	6463789	6465237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_6464072_6464821_6464885_6465023
Isoform_84557_3	chr19	+	3319	8	NIC	ENSMUSG00000033768.18	novel	5001	21	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.44114392723358	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGGCCCAGTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	6477895	6532727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6478809_6493660_6493679_6500557_6500630_6505008_6505311_6522287_6522450_6523347_6523787_6531139_6531527_6531701
Isoform_84558_8	chr19	+	2508	4	ISM	ENSMUSG00000033768.18	ENSMUST00000113458.8	3503	7	15825	0	-3552	0	3prime_fragment	FALSE	canonical	1	1	junction_1	2.05480466765633	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCTGTGTAGTTTGTT	NA	False	NA	15	True	AAAAAG	-25	NA	6563682	6583247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_6563836_6566952_6567279_6569278_6569358_6581297
Isoform_8456_8	chr10	+	1668	6	FSM	ENSMUSG00000006731.11	ENSMUST00000219523.2	1497	6	-171	0	-18	0	multi-exon	FALSE	canonical	3	48	junction_1	9.6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAATTTTTTTGTTTTG	336	False	NA	NA	False	ATTAAA	-24	NA	127001075	127004392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569
Isoform_84560_276	chr19	+	558	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	418	9	1	-9	multi-exon	FALSE	canonical	3	803	junction_1	23.6971634495683	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAAAGCGGTTTCTCT	9732	False	NA	7	True	ATTAAA	-7	NA	6887532	6888387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
Isoform_84561_136	chr19	+	1007	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	-31	9	18	-9	multi-exon	TRUE	canonical	3	803	junction_1	23.6971634495683	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAAAGCGGTTTCTCT	9283	False	NA	7	True	ATTAAA	-7	NA	6887083	6888387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
Isoform_84563_19	chr19	+	1403	4	FSM	ENSMUSG00000024959.15	ENSMUST00000025910.13	1452	4	43	6	43	0	multi-exon	FALSE	canonical	2	8	junction_1	43.6526695123626	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	8724	False	NA	10	True	AATAAA	-15	NA	6919271	6929261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6919809_6920234_6920415_6928007_6928199_6928766
Isoform_84564_3	chr19	+	1016	4	NIC	ENSMUSG00000024959.15	novel	990	4	NA	NA	37	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	40.4502437844597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCGCGCCTCTATCCTT	9421	False	NA	8	True	AATAAA	-13	NA	6919968	6929259	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_6919993_6920234_6920415_6928007_6928199_6928638
Isoform_84565_99	chr19	+	890	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	100	0	37	0	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	9421	False	NA	10	True	AATAAA	-15	NA	6919968	6929261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
Isoform_84566_67	chr19	+	920	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	70	0	7	0	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	9391	False	NA	10	True	AATAAA	-15	NA	6919938	6929261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
Isoform_84569_1657	chr19	+	991	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	7	1	7	-1	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	1657	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTTGGCTGGTCTTTT	1587	False	NA	NA	False	AATAAA	-28	NA	6952342	6954691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
Isoform_8457_81	chr10	+	2441	11	FSM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	-46	0	-46	0	multi-exon	FALSE	canonical	3	39	junction_6	12.214745187682	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTACTTGTGTCTCTGTG	308	False	NA	8	True	GGGGCT	-23	NA	127001047	127008199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
Isoform_8458_5	chr10	+	2898	11	FSM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	-69	-434	-69	434	multi-exon	FALSE	canonical	3	39	junction_6	12.214745187682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTACTGTAGTTGAC	285	False	NA	NA	False	NA	NA	NA	127001024	127008633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
Isoform_84583_60	chr19	+	1103	7	FSM	ENSMUSG00000047656.10	ENSMUST00000088223.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	9.59166304662544	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGGTTCCTCATCCG	NA	False	NA	38	True	ATTAAA	-44	NA	6973539	6976414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
Isoform_84584_4	chr19	+	1048	7	NNC	ENSMUSG00000047656.10	novel	1103	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	14.8174071805952	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGATTTGTGGTTCCTCA	NA	False	NA	34	True	ATTAAA	-40	NA	6973542	6976410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976073_6976137_6976259
Isoform_84585_5	chr19	+	926	6	FSM	ENSMUSG00000047656.10	ENSMUST00000237234.2	972	6	42	4	1	-4	multi-exon	FALSE	canonical	3	11	junction_2	13.8650640099496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGATTTGTGGTTCCT	NA	False	NA	32	True	ATTAAA	-38	NA	6973540	6976408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6973893_6974063_6974146_6975559_6975735_6975876_6975934_6976025_6976137_6976259
Isoform_84586_3	chr19	+	1424	10	ISM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	-18	-2	-18	2	intron_retention	FALSE	canonical	3	30	junction_9	9.49983755546625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTGGGTCTGGCTG	8514	False	NA	8	True	AATAAA	-18	NA	7034159	7175424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066
Isoform_84587_48	chr19	+	1249	11	FSM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	-16	-5	-16	5	multi-exon	FALSE	canonical	3	30	junction_9	10.4383906805599	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGGTCTGGCTGGGT	8516	False	NA	11	True	AATAAA	-21	NA	7034161	7175427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066_7175102_7175277
Isoform_84588_9	chr19	+	1214	10	NIC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-16	5	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	15.0185071014251	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGGTCTGGCTGGGT	8516	False	NA	11	True	AATAAA	-21	NA	7034161	7175427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175277
Isoform_8459_6	chr10	+	2310	10	FSM	ENSMUSG00000006731.11	ENSMUST00000217678.2	2212	10	-94	-4	-92	4	multi-exon	FALSE	canonical	3	10	junction_5	17.4384278371675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTCTCTGTGGTAC	262	False	NA	12	True	GGGGCT	-27	NA	127001001	127008203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
Isoform_84590_181	chr19	+	2306	13	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	300.802676184904	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7244734	7252590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_7244790_7246215_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
Isoform_84594_5160	chr19	+	2794	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	29	0	29	0	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	5160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245672	7252590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
Isoform_84595_329	chr19	+	2890	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	-67	0	-67	0	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245576	7252590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
Isoform_8461_3	chr10	+	2184	5	FSM	ENSMUSG00000006731.11	ENSMUST00000220055.2	1499	5	-684	-1	-50	0	multi-exon	FALSE	canonical	3	64	junction_1	5.19615242270663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAATTTTTTTGTTTTG	304	False	NA	NA	False	ATTAAA	-24	NA	127001043	127004392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569
Isoform_8463_9	chr10	+	2926	10	NIC	ENSMUSG00000006731.11	novel	2395	11	NA	NA	-48	-1	intron_retention	FALSE	canonical	3	39	junction_5	12.6383699527165	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTACTTGTGTCTCTGT	306	False	NA	7	True	GGGGCT	-22	NA	127001045	127008198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
Isoform_84630_10	chr19	+	5166	4	ISM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	2	1	2	-1	intron_retention	FALSE	canonical	3	16	junction_1	22.3059533657621	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTGTTTTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	7394991	7403268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278
Isoform_84633_42	chr19	+	4991	5	FSM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	-3	1	-3	-1	multi-exon	FALSE	canonical	3	16	junction_1	19.3713706278105	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTGTTTTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	7394986	7403268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278_7399828_7400007
Isoform_84634_3	chr19	+	4599	4	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.3076733143296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCACTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	7394986	7403266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_7395283_7397431_7397927_7399278_7399828_7400007
Isoform_84635_13	chr19	+	4070	3	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	-23	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCACTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	7394966	7403266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_7395283_7397431_7397927_7400007
Isoform_84636_20	chr19	+	1969	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	-1	2400	-1	0	multi-exon	FALSE	canonical	3	31	junction_6	6.18409698788397	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTGGAAGCAGTTC	NA	False	NA	NA	False	AATAAA	-32	NA	7471801	7511565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
Isoform_84637_7	chr19	+	2767	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	-38	1639	2	761	multi-exon	TRUE	canonical	3	31	junction_6	6.18409698788397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAATTGTAGTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	7471764	7512326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
Isoform_84641_64	chr19	+	776	5	FSM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	0	2747	0	-913	multi-exon	TRUE	canonical	3	141	junction_1	31.8825971338597	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATACTGCAGTAGCTACCT	NA	False	NA	22	True	AATAAA	-24	NA	7534823	7563163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_7534930_7535296_7535361_7552301_7552405_7556318_7556588_7562929
Isoform_84643_10	chr19	+	1107	4	NIC	ENSMUSG00000060675.14	novel	1901	5	NA	NA	3	-928	intron_retention	FALSE	canonical	3	191	junction_2	16.9771087709958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTTTTGTGAGGATA	NA	False	NA	7	True	AATAAA	-9	NA	7534844	7563148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_7535361_7552301_7552405_7556318_7556588_7562929
Isoform_84644_5	chr19	+	2322	2	ISM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	12	1	0	0	intron_retention	FALSE	canonical	3	444	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700850	8703806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_8700871_8701504
Isoform_84645_173	chr19	+	593	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	12	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_84647_6	chr19	+	653	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	-51	3	-51	-1	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTATTGTGATGGCTTA	NA	False	NA	23	True	AATAAA	-12	NA	8700787	8703804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_84649_7	chr19	+	784	9	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	444	junction_1	212.636279830136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700847	8703807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8700871_8701504_8701554_8701766_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_8465_768	chr10	+	1632	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	9	143	9	-143	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGCTGTGTTCCTGGA	9225	False	NA	23	True	ATTAAA	-18	NA	127102264	127117676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
Isoform_84651_202	chr19	+	574	9	FSM	ENSMUSG00000108414.2	ENSMUST00000205909.2	709	9	135	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	124.260814418706	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_84653_10	chr19	+	762	8	FSM	ENSMUSG00000108414.2	ENSMUST00000206135.2	744	8	-18	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	116.047316176794	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8701554_8701766_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_8466_58	chr10	+	1821	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-34	-3	-15	3	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAGTTTCAAAATATTC	9182	False	NA	19	True	AATAAA	-21	NA	127102221	127117822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
Isoform_84662_1113	chr19	+	1217	11	FSM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	-17	4	-5	2	multi-exon	FALSE	canonical	3	1012	junction_8	78.6635875103596	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCCTGGACCTTTTGTG	958	False	NA	24	True	AATAAA	-17	NA	8713185	8717984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
Isoform_84667_17	chr19	+	1292	10	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	2	2	intron_retention	FALSE	canonical	3	1012	junction_7	81.959038248489	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCCTGGACCTTTTGTG	965	False	NA	24	True	AATAAA	-17	NA	8713192	8717984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8713270_8713350_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
Isoform_8467_422	chr10	+	1778	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	9	-3	9	3	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAGTTTCAAAATATTC	9225	False	NA	19	True	AATAAA	-21	NA	127102264	127117822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
Isoform_84674_112	chr19	+	1797	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	27	427	27	0	multi-exon	FALSE	canonical	3	140	junction_1	18.8417090519942	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6576	False	NA	12	True	NA	NA	NA	8718803	8733006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
Isoform_84675_29	chr19	+	2023	11	NIC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	55.2485293921929	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6929	False	NA	12	True	NA	NA	NA	8719156	8733006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8719519_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
Isoform_84676_104	chr19	+	2114	10	FSM	ENSMUSG00000010110.18	ENSMUST00000073430.14	2112	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	190	junction_5	5.51764845241562	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6937	False	NA	12	True	NA	NA	NA	8719164	8733006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
Isoform_84679_1001	chr19	+	2280	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	35	11	1	4	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCCCATTACTGGCT	8604	False	NA	36	True	GATAAA	-15	NA	8734471	8748275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
Isoform_8468_98	chr10	+	1673	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-34	145	-15	-145	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9182	False	NA	21	True	ATTAAA	-16	NA	127102221	127117674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
Isoform_84680_390	chr19	+	2301	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	13	12	13	3	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8582	False	NA	35	True	GATAAA	-14	NA	8734449	8748274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
Isoform_84683_21	chr19	+	3114	22	Fusion	ENSMUSG00000010097.16_ENSMUSG00000117924.2	novel	2326	21	NA	NA	1	2	multi-exon	FALSE	canonical	3	621	junction_4	71.4940017781173	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGTCCTCTCTCTCAT	8604	False	NA	NA	False	AATAAA	-40	NA	8734471	8749841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937_8748680_8749411
Isoform_84685_161	chr19	+	4003	20	FSM	ENSMUSG00000010097.16	ENSMUST00000184970.9	4042	20	42	-3	-1	3	multi-exon	FALSE	canonical	3	621	junction_4	65.017278760312	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8645	False	NA	35	True	GATAAA	-14	NA	8734512	8748274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
Isoform_84686_78	chr19	+	4065	20	FSM	ENSMUSG00000010097.16	ENSMUST00000184970.9	4042	20	-21	-2	13	2	multi-exon	FALSE	canonical	3	621	junction_4	65.017278760312	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8582	False	NA	34	True	GATAAA	-13	NA	8734449	8748273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
Isoform_84688_22	chr19	+	4123	19	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	1	3	intron_retention	FALSE	canonical	3	621	junction_4	65.1595383048312	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8604	False	NA	35	True	GATAAA	-14	NA	8734471	8748274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
Isoform_84702_448	chr19	+	723	2	FSM	ENSMUSG00000117924.2	ENSMUST00000010248.4	748	2	7	18	7	-18	multi-exon	FALSE	canonical	3	838	junction_1	0	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTACTTAAGCCAT	6526	False	NA	NA	False	AATAAA	-20	NA	8748366	8749821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8748680_8749411
Isoform_84703_13	chr19	+	2228	2	FSM	ENSMUSG00000117924.2	ENSMUST00000010248.4	748	2	7	-1487	7	1487	multi-exon	FALSE	canonical	3	838	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAGGTGTTTTAGACT	6526	False	NA	NA	False	AATAAA	-15	NA	8748366	8751326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8748680_8749411
Isoform_84704_64	chr19	+	2060	2	FSM	ENSMUSG00000071661.8	ENSMUST00000172175.3	2004	2	-49	-7	-49	7	multi-exon	FALSE	canonical	3	20	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGGTGTTGGCTGGTTT	5379	False	NA	19	True	CATAAA	-24	NA	8779869	8782217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8780050_8780337
Isoform_84710_81	chr19	+	3055	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-5	2068	-5	-2068	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTTGTATTTTCTTTAC	NA	False	NA	24	True	AATAAA	-34	NA	8797368	8809439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
Isoform_84716_5	chr19	+	3240	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-192	2070	-192	-2070	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGTTTGTATTTTCTTT	NA	False	NA	22	True	AATAAA	-32	NA	8797181	8809437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
Isoform_84717_18	chr19	+	5153	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-36	1	-36	-1	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCCTATCTCCTGTGGC	NA	False	NA	14	True	AATAAA	-17	NA	8797337	8811506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
Isoform_84720_5	chr19	+	3521	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-476	2073	-476	-2073	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCGTTTGTATTTTC	NA	False	NA	19	True	AATAAA	-29	NA	8796897	8809434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
Isoform_84723_3	chr19	+	5580	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-466	4	-466	-4	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTCCTATCTCCTGT	NA	False	NA	11	True	AATAAA	-14	NA	8796907	8811503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
Isoform_84727_18	chr19	+	1948	12	FSM	ENSMUSG00000071657.13	ENSMUST00000171649.8	1962	12	-3	17	-3	0	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8814827	8826030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_84728_19	chr19	+	1876	12	FSM	ENSMUSG00000071657.13	ENSMUST00000171649.8	1962	12	67	19	67	-2	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTTGTGTGGACAT	NA	False	NA	11	True	AATAAA	-11	NA	8814897	8826028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_84729_41	chr19	+	1733	12	FSM	ENSMUSG00000071657.13	ENSMUST00000159634.8	1684	12	-49	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8815043	8826031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_84731_33	chr19	+	1591	11	FSM	ENSMUSG00000071657.13	ENSMUST00000160556.8	1795	11	205	-1	143	0	multi-exon	FALSE	canonical	0	0	junction_6	47.8256207487158	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8816896	8826031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_84732_11	chr19	+	1643	11	FSM	ENSMUSG00000071657.13	ENSMUST00000160556.8	1795	11	153	-1	91	0	multi-exon	FALSE	canonical	0	0	junction_6	47.8256207487158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8816844	8826031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_84733_3	chr19	+	1760	11	FSM	ENSMUSG00000071657.13	ENSMUST00000160556.8	1795	11	33	2	-12	-2	multi-exon	FALSE	canonical	0	0	junction_6	47.8256207487158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTTGTGTGGACAT	NA	False	NA	11	True	AATAAA	-11	NA	8816724	8826028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_84735_34	chr19	+	1378	11	FSM	ENSMUSG00000071657.13	ENSMUST00000086058.13	1388	11	11	-1	-5	0	multi-exon	FALSE	canonical	0	0	junction_6	60.1671837466239	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8817893	8826031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8817933_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_84736_4	chr19	+	1363	10	FSM	ENSMUSG00000071657.13	ENSMUST00000162071.8	1911	10	572	-24	572	7	multi-exon	FALSE	canonical	0	0	junction_5	49.7082848250361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTTTAGAGTCAGTTC	NA	False	NA	37	True	AATAAA	-37	NA	8818470	8826054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_84737_4	chr19	+	2521	2	FSM	ENSMUSG00000071656.8	ENSMUST00000096257.3	2583	2	64	-2	64	2	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATACAGACTTTTGTGT	1499	False	NA	NA	False	ATTAAA	-21	NA	8828212	8831275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8828477_8829018
Isoform_84738_5	chr19	+	2723	2	FSM	ENSMUSG00000071656.8	ENSMUST00000096257.3	2583	2	-234	94	-217	5	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGTTTCATGATCTT	1201	False	NA	NA	False	ATTAAA	-20	NA	8827914	8831179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8828477_8829018
Isoform_84742_155	chr19	+	1077	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	-34	-10	29	2	multi-exon	FALSE	canonical	3	339	junction_1	323.787653323045	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGCTCCTTCCAGAAC	5878	False	NA	35	True	AATAAA	-23	NA	8848888	8853030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
Isoform_84743_198	chr19	+	1052	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	-11	-8	-11	0	multi-exon	FALSE	canonical	3	339	junction_1	323.787653323045	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5901	False	NA	33	True	AATAAA	-21	NA	8848911	8853028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
Isoform_84744_13	chr19	+	1174	9	NIC	ENSMUSG00000071655.13	novel	1033	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	339	junction_1	343.320345122453	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5881	False	NA	33	True	AATAAA	-21	NA	8848891	8853028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8848950_8849034_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
Isoform_84751_766	chr19	+	1102	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	-11	200	-11	0	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCCTGGCTCCTTCCAG	5935	False	NA	32	True	AATAAA	-20	NA	8848945	8853027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
Isoform_84752_64	chr19	+	1176	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	-84	199	13	0	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5862	False	NA	33	True	AATAAA	-21	NA	8848872	8853028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
Isoform_84767_58	chr19	+	716	5	FSM	ENSMUSG00000071653.10	ENSMUST00000185488.7	500	5	-21	-195	-5	0	multi-exon	FALSE	canonical	3	137	junction_2	1592.05511839258	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTGGGATGAAGTGCAG	NA	False	NA	27	True	AATAAA	-16	NA	8866257	8868105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8866329_8866487_8866613_8867000_8867092_8867366_8867465_8867774
Isoform_84769_164	chr19	+	2502	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	50	-1746	4	1746	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866266	8869991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
Isoform_84770_1484	chr19	+	616	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	50	140	4	0	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTGGGATGAAGTGCAG	NA	False	NA	27	True	AATAAA	-16	NA	8866266	8868105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
Isoform_84785_1139	chr19	+	3262	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	10	2	10	-2	multi-exon	FALSE	canonical	3	204	junction_1	0	1139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCCAGTGTTTCTATC	NA	False	NA	18	True	AATAAA	-19	NA	8870378	8875250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8870513_8872122
Isoform_8479_470	chr10	+	862	4	FSM	ENSMUSG00000025408.16	ENSMUST00000026475.15	890	4	25	3	5	-3	multi-exon	FALSE	canonical	0	0	junction_1	321.555593949165	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTCTCACTTTTTCTT	NA	False	NA	26	True	AGTAAA	-15	NA	127126667	127132154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127126761_127129580_127129629_127131189_127131348_127131591
Isoform_84793_40	chr19	+	3842	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	8	-62	3	62	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTGTATAAGCTGC	1907	False	NA	6	True	AGTAAA	-14	NA	8875478	8894098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
Isoform_84795_24	chr19	+	3870	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	-15	-67	-9	67	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATAAGCTGCTTCAT	1884	False	NA	11	True	AGTAAA	-19	NA	8875455	8894103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
Isoform_84799_37	chr19	+	5055	23	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	5	-6	intron_retention	FALSE	canonical	3	992	junction_1	106.357585297962	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1909	False	NA	-62	True	GATAAA	-36	NA	8875480	8894030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
Isoform_8480_20	chr10	+	816	3	FSM	ENSMUSG00000025408.16	ENSMUST00000139091.2	600	3	4	-220	3	-3	multi-exon	FALSE	canonical	0	0	junction_1	357	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTCTCACTTTTTCTT	NA	False	NA	26	True	AGTAAA	-15	NA	127126665	127132154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127126761_127131189_127131348_127131591
Isoform_84843_236	chr19	+	1558	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	41	4	20	-4	multi-exon	FALSE	canonical	3	179	junction_3	18.060661671157	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGGGCTTCATGGTTTC	4753	False	NA	15	True	AATAAA	-12	NA	8897778	8904596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
Isoform_84845_4	chr19	+	1764	4	NIC	ENSMUSG00000071649.7	novel	1603	5	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	186	junction_2	17.6131264181639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGGGCTTCATGGTTTC	4730	False	NA	15	True	AATAAA	-12	NA	8897755	8904596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8898013_8899169_8899345_8902901_8903737_8904099
Isoform_84846_21	chr19	+	1339	5	FSM	ENSMUSG00000071649.7	ENSMUST00000237071.2	909	5	-16	-414	-16	-4	multi-exon	FALSE	canonical	3	30	junction_2	75.1644031440415	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGGGCTTCATGGTTTC	4806	False	NA	15	True	AATAAA	-12	NA	8897831	8904596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8898013_8899169_8899345_8903067_8903263_8903445_8903737_8904099
Isoform_84847_19	chr19	+	1423	5	FSM	ENSMUSG00000071649.7	ENSMUST00000237071.2	909	5	-99	-415	-10	-3	multi-exon	FALSE	canonical	3	30	junction_2	75.1644031440415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGGCTTCATGGTTTCC	4723	False	NA	16	True	AATAAA	-13	NA	8897748	8904597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8898013_8899169_8899345_8903067_8903263_8903445_8903737_8904099
Isoform_8485_3	chr10	+	1967	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219511.2	2217	16	405	-155	405	0	multi-exon	FALSE	canonical	3	14	junction_1	20.2809160433042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	7494	False	NA	10	True	ATTAAA	-16	NA	127158237	127165812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127158301_127158562_127158760_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_84851_44	chr19	+	3188	22	FSM	ENSMUSG00000071647.6	ENSMUST00000096241.6	3322	22	119	15	119	-15	multi-exon	FALSE	canonical	3	31	junction_2	12.0183155765295	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGTAACTGCC	2034	False	NA	-9	True	NA	NA	NA	8907034	8918931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
Isoform_84853_26	chr19	+	3438	22	FSM	ENSMUSG00000071647.6	ENSMUST00000096241.6	3322	22	-131	15	-131	-15	multi-exon	FALSE	canonical	3	31	junction_2	12.0183155765295	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGTAACTGCC	1784	False	NA	-9	True	NA	NA	NA	8906784	8918931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
Isoform_84855_47	chr19	+	3185	22	FSM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	-222	15	119	-15	multi-exon	FALSE	canonical	3	39	junction_2	11.2769706937285	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGTAACTGCC	2034	False	NA	-9	True	NA	NA	NA	8907034	8918931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
Isoform_84856_19	chr19	+	3431	22	FSM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	-472	19	-131	-19	multi-exon	FALSE	canonical	3	39	junction_2	11.2769706937285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAAAGTAAC	1784	False	NA	-13	True	NA	NA	NA	8906784	8918927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
Isoform_84863_4203	chr19	+	3134	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	0	1	0	-1	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	4203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCAGCTATTCTGTGT	3469	False	NA	19	True	AATAAA	-23	NA	8919238	8929666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
Isoform_84864_90	chr19	+	3262	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	-130	3	-130	-3	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCTCAGCTATTCTGT	3339	False	NA	17	True	AATAAA	-21	NA	8919108	8929664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
Isoform_84865_271	chr19	+	3162	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	-30	3	-30	-3	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCTCAGCTATTCTGT	3439	False	NA	17	True	AATAAA	-21	NA	8919208	8929664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
Isoform_8487_4	chr10	+	2038	16	NIC	ENSMUSG00000040345.11	novel	2217	16	NA	NA	709	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	23.412247507092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAACATACATAGACTAAA	7798	False	NA	8	True	ATTAAA	-14	NA	127158541	127165810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127158760_127160213_127160329_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_8488_13	chr10	+	1928	15	ISM	ENSMUSG00000040345.11	ENSMUST00000219511.2	2217	16	706	-155	706	0	3prime_fragment	FALSE	canonical	3	18	junction_1	17.5692507361177	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	7795	False	NA	10	True	ATTAAA	-16	NA	127158538	127165812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_127158760_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_8489_8	chr10	+	1922	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219026.2	1946	16	26	-2	-23	2	multi-exon	FALSE	canonical	2	5	junction_1	22.9759294335035	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATACATAGACTAAATACA	8858	False	NA	12	True	ATTAAA	-18	NA	127159601	127165814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127159700_127160213_127160329_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_84895_8	chr19	+	1954	5	FSM	ENSMUSG00000071645.7	ENSMUST00000236564.2	1858	5	-95	-1	-12	1	multi-exon	FALSE	canonical	3	135	junction_1	17.1955662890176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTCCGCATCTCAT	1345	False	NA	NA	False	AATAAA	-25	NA	8931198	8940866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707
Isoform_84896_503	chr19	+	2757	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	-12	8	-12	-8	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGACATTTAATGTTCTT	1345	False	NA	3	True	AATAAA	-18	NA	8931198	8943566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
Isoform_84897_33	chr19	+	2810	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	-64	7	-64	-7	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACATTTAATGTTCTTT	1293	False	NA	4	True	AATAAA	-19	NA	8931146	8943567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
Isoform_84898_11	chr19	+	2869	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	-122	6	-122	-6	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATTTAATGTTCTTTT	1235	False	NA	5	True	AATAAA	-20	NA	8931088	8943568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
Isoform_84899_7	chr19	+	2278	8	NIC	ENSMUSG00000071645.7	novel	2753	9	NA	NA	-12	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	55.7615184403681	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGACATTTAATGTTCTT	1345	False	NA	3	True	AATAAA	-18	NA	8931198	8943566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8941383_8941494_8941627_8941739_8941924_8942018_8942397
Isoform_8490_7	chr10	+	1833	15	FSM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	-49	-2	0	2	multi-exon	FALSE	canonical	1	1	junction_1	20.6447107422859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATACATAGACTAAATACA	8832	False	NA	12	True	ATTAAA	-18	NA	127159575	127165814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127159700_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_84905_11835	chr19	+	1410	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	154	300	154	-300	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	11835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTTTCCTGTCCTGCC	997	False	NA	10	True	ATTAAA	-15	NA	8944558	8955543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
Isoform_84906_927	chr19	+	1595	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	-29	298	-29	-298	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTCCTGTCCTGCCTC	814	False	NA	12	True	ATTAAA	-17	NA	8944375	8955545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
Isoform_8491_17	chr10	+	1720	12	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	1886	0	1319	0	3prime_fragment	FALSE	canonical	3	51	junction_1	7.05117070169648	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	NA	False	NA	10	True	ATTAAA	-16	NA	127161510	127165812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_8493_22	chr10	+	1426	11	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	2327	-2	1760	2	3prime_fragment	FALSE	canonical	3	63	junction_5	5.18169856321265	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATACATAGACTAAATACA	NA	False	NA	12	True	ATTAAA	-18	NA	127161951	127165814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_84931_3	chr19	+	2056	5	FSM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	1	16043	1	867	multi-exon	FALSE	canonical	3	15	junction_4	26.3853652618265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAAGCCAAAGGTCT	NA	False	NA	NA	False	NA	NA	NA	8966648	8980517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_8979062
Isoform_84932_3	chr19	+	1195	5	FSM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	3	16902	3	8	multi-exon	FALSE	canonical	3	15	junction_4	26.3853652618265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGGTGTCTCCGCAG	NA	False	NA	NA	False	ATTAAA	-21	NA	8966650	8979658	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_8979062
Isoform_84933_8	chr19	+	1152	7	NIC	ENSMUSG00000069833.14	novel	1188	7	NA	NA	2	21	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	26.9222130508537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGCGTACTTA	NA	False	NA	34	True	AATAAA	-35	NA	8966649	9054299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9022988_9023081_9053939
Isoform_84934_30	chr19	+	1058	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	-9	-219	2	19	multi-exon	FALSE	canonical	3	34	junction_5	17.6703140888893	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATGGGTTTTGCGTACT	NA	False	NA	32	True	AATAAA	-33	NA	8966649	9054297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
Isoform_84935_4	chr19	+	1957	7	NNC	ENSMUSG00000069833.14	novel	1188	7	NA	NA	-24	938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.7533781727558	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGGAATTGTTATCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	8966623	9055216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939_9054625_9054670
Isoform_84937_6082	chr19	+	866	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	58	5	0	0	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	6082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTCTTTGTGATTG	4927	False	NA	18	True	AATAAA	-16	NA	9960067	9962457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
Isoform_84938_107	chr19	+	935	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	-11	5	-11	0	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTCTTTGTGATTG	4858	False	NA	18	True	AATAAA	-16	NA	9959998	9962457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
Isoform_84947_12	chr19	+	2192	10	FSM	ENSMUSG00000024663.21	ENSMUST00000113161.10	5146	10	33	2921	32	1	multi-exon	FALSE	canonical	3	20	junction_4	9.36897954837013	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTAGGCGGCAGTGGCC	4000	False	NA	3	True	AATAAA	-18	NA	9995589	10012820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
Isoform_84948_60	chr19	+	2163	10	FSM	ENSMUSG00000024663.21	ENSMUST00000113161.10	5146	10	60	2923	-12	-1	multi-exon	FALSE	canonical	3	20	junction_4	9.36897954837013	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGCTAGGCGGCAGTGG	4027	False	NA	1	True	AATAAA	-16	NA	9995616	10012818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
Isoform_84951_45	chr19	+	1944	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	59	1	-12	-1	multi-exon	FALSE	canonical	3	22	junction_4	8.51377560192891	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGCTAGGCGGCAGTGG	4027	False	NA	1	True	AATAAA	-16	NA	9995616	10012818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
Isoform_84952_3	chr19	+	2100	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	34	-130	34	-1	multi-exon	FALSE	canonical	3	22	junction_4	8.51377560192891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCCATGGCTACCACCA	4002	False	NA	NA	False	ATTAAA	-16	NA	9995591	10012949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
Isoform_84953_3	chr19	+	1758	12	FSM	ENSMUSG00000024664.6	ENSMUST00000115995.4	3687	12	67	1862	-29	4	multi-exon	TRUE	canonical	0	0	junction_1	0.642824346533225	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTGGACTTTCATGAAT	729	False	NA	NA	False	NA	NA	NA	10018999	10035612	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10019321_10029565_10029677_10030199_10030398_10031383_10031486_10031590_10031714_10031969_10032031_10032470_10032548_10032960_10033059_10033354_10033452_10033580_10033661_10033788_10033915_10035248
Isoform_84954_1803	chr19	+	3410	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	47	3	-4	-3	multi-exon	FALSE	canonical	3	652	junction_7	60.0436480355873	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTTGTTATTCATT	NA	False	NA	15	True	AATAAA	-16	NA	10160298	10174235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
Isoform_84955_174	chr19	+	3454	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	3	3	3	-3	multi-exon	TRUE	canonical	3	652	junction_7	60.0436480355873	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTTGTTATTCATT	NA	False	NA	15	True	AATAAA	-16	NA	10160254	10174235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
Isoform_8496_5	chr10	+	4229	26	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-41	2	combination_of_known_junctions	TRUE	canonical	3	17	junction_14	55.4173113746959	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTGGCCATCAGTCGC	NA	False	NA	6	True	TATAAA	-22	NA	127216489	127335238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127300999_127301054_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
Isoform_8498_8	chr10	+	4243	26	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-31	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	56.9372426448629	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAGCAAAAA	NA	False	NA	-18	True	NA	NA	NA	127216499	127335214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
Isoform_84981_947	chr19	+	384	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	216	6	12	0	multi-exon	FALSE	canonical	3	2797	junction_1	495.826806679734	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4193	False	NA	27	True	AATAAA	-16	NA	10181593	10185182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
Isoform_84987_8	chr19	+	4967	10	FSM	ENSMUSG00000024743.17	ENSMUST00000223586.2	1344	10	-458	-3165	-65	-1571	multi-exon	FALSE	canonical	2	4	junction_3	24.2827988705514	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTAGGGCCTTGGCTG	NA	False	NA	9	True	AATAAA	-9	NA	10366388	10428973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10399120_10399253_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
Isoform_84988_62	chr19	+	4835	9	FSM	ENSMUSG00000024743.17	ENSMUST00000073899.6	1605	9	-65	-3165	-65	-1571	multi-exon	FALSE	canonical	3	41	junction_5	10.6418983268964	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTAGGGCCTTGGCTG	NA	False	NA	9	True	AATAAA	-9	NA	10366388	10428973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
Isoform_84993_12	chr19	+	3570	11	NIC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-22	9	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	93.34157701689	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCATTGTATTTTTTTC	NA	False	NA	25	True	AATAAA	-25	NA	10502607	10525026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_84996_10	chr19	+	3667	11	FSM	ENSMUSG00000034820.5	ENSMUST00000236206.2	3315	11	-23	-329	-23	78	multi-exon	FALSE	canonical	3	29	junction_4	86.2092802429066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATTCTGCATTGAATAGA	NA	False	NA	14	True	AATAAA	-19	NA	10502606	10525095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_84997_16	chr19	+	3587	11	FSM	ENSMUSG00000034820.5	ENSMUST00000236206.2	3315	11	-20	-252	-20	1	multi-exon	FALSE	canonical	3	29	junction_4	86.2092802429066	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTATACTGCATTGTA	NA	False	NA	17	True	AATAAA	-17	NA	10502609	10525018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_8500_194	chr10	+	4172	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-36	4	combination_of_known_junctions	FALSE	canonical	3	158	junction_11	25.3408705892718	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGCCATCAGTCGCTG	NA	False	NA	8	True	TATAAA	-24	NA	127216494	127335240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
Isoform_85000_10	chr19	+	3649	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-23	76	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	89.3263678876512	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGATTCTGCATTGAATA	NA	False	NA	12	True	AATAAA	-17	NA	10502606	10525093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_85001_16	chr19	+	3579	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-20	9	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	89.3263678876512	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCATTGTATTTTTTTC	NA	False	NA	25	True	AATAAA	-25	NA	10502609	10525026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_85003_21	chr19	+	3675	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-20	78	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	81.5971200472174	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATTCTGCATTGAATAGA	NA	False	NA	14	True	AATAAA	-19	NA	10502609	10525095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_85005_8	chr19	+	3568	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	93.086841175324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTATACTGCATTGTA	NA	False	NA	17	True	AATAAA	-17	NA	10502609	10525018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509624_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_85007_9	chr19	+	3596	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	85.9051220824463	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTATACTGCATTGTA	NA	False	NA	17	True	AATAAA	-17	NA	10502608	10525018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509624_10509699_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_85008_42	chr19	+	3583	10	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-28	82	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	59.2792096047006	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	NA	False	NA	18	True	AATAAA	-23	NA	10502601	10525099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_85009_51	chr19	+	3500	10	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-20	7	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	59.2792096047006	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGCATTGTATTTTTT	NA	False	NA	23	True	AATAAA	-23	NA	10502609	10525024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_85010_131	chr19	+	3508	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	1	-9	1	9	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCATTGTATTTTTTTC	NA	False	NA	25	True	AATAAA	-25	NA	10502630	10525026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_85011_80	chr19	+	3610	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	-22	-88	-22	88	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAATAGATTTGTTGAGG	NA	False	NA	24	True	AATAAA	-29	NA	10502607	10525105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_85016_17	chr19	+	2681	9	FSM	ENSMUSG00000034445.9	ENSMUST00000237581.2	2634	9	-37	-10	0	3	multi-exon	FALSE	canonical	3	15	junction_1	28.8693176226942	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTTTTGTTCAGACTG	NA	False	NA	17	True	ATTAAA	-20	NA	10554817	10567196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10554928_10555097_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85017_3	chr19	+	2586	8	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	35.9500787657733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554817	10567194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10554928_10555097_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85018_11	chr19	+	2328	8	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	27.7319531315376	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554818	10567194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10554928_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85019_19	chr19	+	2235	7	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	29.2845237853262	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554818	10567194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10554928_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85020_85	chr19	+	2849	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	282	-1	0	1	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554817	10567194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85022_4	chr19	+	3133	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	-1	-2	-1	2	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTTTTGTTCAGACT	NA	False	NA	16	True	ATTAAA	-19	NA	10554534	10567195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85023_3	chr19	+	1697	8	NNC	ENSMUSG00000034445.9	novel	3130	8	NA	NA	1	195	intron_retention	FALSE	canonical	0	0	junction_7	33.6979379251634	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATTTTAAACAAA	NA	False	NA	NA	False	NA	NA	NA	10554815	10567388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10567236
Isoform_85024_31	chr19	+	2755	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	1	-1282	1	1	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554818	10567194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85025_3	chr19	+	3022	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	-267	-1281	15	0	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554550	10567193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85026_3	chr19	+	2951	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	0	-1477	0	196	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATTTTAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	10554817	10567389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85027_3	chr19	+	2556	6	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	1	1	intron_retention	FALSE	canonical	1	1	junction_2	42.7298490519215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554818	10567194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10555448_10557826_10557927_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_85030_318	chr19	+	4235	28	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_5	848.081981892655	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	630	False	NA	56	True	AATAAA	-16	NA	10582950	10607183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
Isoform_85034_8540	chr19	+	4216	27	FSM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	242	1	-18	-1	multi-exon	FALSE	canonical	3	2606	junction_4	266.254060724097	8540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTCTTATTGGTCTCTG	612	False	NA	55	True	AATAAA	-15	NA	10582932	10607182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
Isoform_8508_5	chr10	+	4116	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-24	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	47.2269932230381	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAGCAAAAA	NA	False	NA	-18	True	NA	NA	NA	127216506	127335214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298074_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
Isoform_85086_13	chr19	+	2503	5	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_1	44.7017896733453	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	16	True	AATAAA	-19	NA	10666127	10691990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10666174_10683573_10683673_10687633_10687806_10688634_10688718_10689887
Isoform_85087_20	chr19	+	2590	5	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	46.3923485070545	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	16	True	AATAAA	-19	NA	10666127	10691990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10666261_10683573_10683673_10687633_10687806_10688634_10688718_10689887
Isoform_85088_123	chr19	+	2672	5	FSM	ENSMUSG00000048832.10	ENSMUST00000087951.7	2686	5	14	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	17.2699160391705	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	16	True	AATAAA	-19	NA	10666128	10691990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689887
Isoform_85090_10	chr19	+	2499	4	NIC	ENSMUSG00000048832.10	novel	2686	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	51.9893151415643	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGGTGTCCATGATGA	NA	False	NA	15	True	AATAAA	-18	NA	10666128	10691989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10666344_10683573_10683673_10688634_10688718_10689887
Isoform_85091_33	chr19	+	2675	5	FSM	ENSMUSG00000048832.10	ENSMUST00000235927.2	2690	5	14	1	0	-1	multi-exon	FALSE	canonical	3	21	junction_1	43.0145324280062	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGGTGTCCATGATGA	NA	False	NA	15	True	AATAAA	-18	NA	10666128	10691989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10666348_10683573_10683673_10687633_10687806_10688634_10688718_10689887
Isoform_85094_98	chr19	+	2176	16	FSM	ENSMUSG00000024735.14	ENSMUST00000179297.3	6035	16	-170	4029	13	-2	multi-exon	FALSE	canonical	3	14	junction_3	36.1106940146852	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCAGCTTCTTGTGTC	NA	False	NA	13	True	ATTAAA	-19	NA	10872607	10882894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876289_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
Isoform_85095_684	chr19	+	2119	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	13	2	13	-2	multi-exon	FALSE	canonical	3	125	junction_6	13.7346277707115	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCAGCTTCTTGTGTC	NA	False	NA	13	True	ATTAAA	-19	NA	10872607	10882894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
Isoform_85097_9	chr19	+	2181	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	-51	4	-51	-4	multi-exon	FALSE	canonical	3	125	junction_6	13.7346277707115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAGTCAGCTTCTTGTG	NA	False	NA	11	True	ATTAAA	-17	NA	10872543	10882892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
Isoform_8510_29	chr10	+	4072	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	41.0995379862634	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACTGGCCATCAGTC	NA	False	NA	4	True	TATAAA	-20	NA	127216494	127335236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
Isoform_85102_42	chr19	+	2661	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	19	-1518	-2	1518	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTTGTGAGTTTCC	180	False	NA	4	True	AATAAA	-13	NA	11747773	11753842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
Isoform_85104_180	chr19	+	1016	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-11	157	-11	10	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTCTCTTTGGTCAGTT	150	False	NA	35	True	ATTAAA	-23	NA	11747743	11752167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
Isoform_85105_20	chr19	+	1158	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-11	15	-11	-15	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACCTGG	150	False	NA	NA	False	NA	NA	NA	11747743	11752309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
Isoform_85109_48	chr19	+	4121	20	FSM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	1	-964	1	-124	multi-exon	FALSE	canonical	3	28	junction_5	81.8323060642279	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGCTTTATACCTT	NA	False	NA	4	True	AATAAA	-18	NA	11889807	11922331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
Isoform_85113_599	chr19	+	4053	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	38	125	-6	-125	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGCTTTATACCT	NA	False	NA	3	True	AATAAA	-17	NA	11889800	11922330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
Isoform_85120_47	chr19	+	4174	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	45	-3	1	3	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGATGTCCATCTCTTTT	NA	False	NA	24	True	AATAAA	-14	NA	11889807	11922458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
Isoform_85134_267	chr19	+	4595	14	FSM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	-106	-1	-106	1	multi-exon	FALSE	canonical	3	144	junction_3	15.1325504406969	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTCTGATTTGCTTCT	NA	False	NA	10	True	ATTAAA	-17	NA	11943198	11971477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
Isoform_85135_21	chr19	+	4731	14	FSM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	-241	-2	-241	2	multi-exon	FALSE	canonical	3	144	junction_3	15.1325504406969	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTGATTTGCTTCTA	NA	False	NA	11	True	ATTAAA	-18	NA	11943063	11971478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
Isoform_85146_68	chr19	+	3255	4	FSM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	12	0	12	0	multi-exon	FALSE	canonical	3	71	junction_1	5.90668171555645	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTCTTTAGTTATT	NA	False	NA	4	True	AATAAA	-13	NA	12550898	12567126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_12550945_12554453_12554535_12561286_12561487_12564198
Isoform_85148_16	chr19	+	5660	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	-18	2	-18	-2	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCGCTGCTCTTCTTAA	NA	False	NA	18	True	AATAAA	-22	NA	16110176	16364825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
Isoform_85149_5	chr19	+	5790	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	-146	0	-146	0	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTGCTCTTCTTAAAA	NA	False	NA	20	True	AATAAA	-24	NA	16110048	16364827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
Isoform_85153_22	chr19	+	1151	8	ISM	ENSMUSG00000039126.11	ENSMUST00000223920.2	1803	9	10	13096	1	-1643	5prime_fragment	FALSE	canonical	3	57	junction_3	14.2427926635594	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGCTATTCTTTCAGA	NA	False	NA	10	True	AATAAA	-22	NA	17114139	17185852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594
Isoform_85154_92	chr19	+	4113	10	NNC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	27.992062366956	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGTTTCCTCTTTCA	NA	False	NA	2	True	AATAAA	-14	NA	17114129	17201296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147_17200048_17200085
Isoform_85158_3	chr19	+	4015	9	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	39.0174239923653	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGTTTCCTCTTTCA	NA	False	NA	2	True	AATAAA	-14	NA	17114139	17201296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17193689_17193738_17198147
Isoform_85159_23	chr19	+	3979	8	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	24.5165500119775	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTTTCCTCTTTCAAC	NA	False	NA	4	True	AATAAA	-16	NA	17114129	17201298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
Isoform_85160_24	chr19	+	2490	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	-10	2	-10	-2	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGAATCCTGTATCTGT	1314	False	NA	17	True	AATAAA	-32	NA	17371396	17378711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
Isoform_85161_195	chr19	+	2468	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	13	1	13	-1	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAATCCTGTATCTGTT	1337	False	NA	18	True	AATAAA	-33	NA	17371419	17378712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
Isoform_85162_274	chr19	+	2409	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	72	1	72	-1	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAATCCTGTATCTGTT	1396	False	NA	18	True	AATAAA	-33	NA	17371478	17378712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
Isoform_85175_25	chr19	+	1679	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	8	253	-1	-19	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTATCTAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	18609321	18629539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
Isoform_85178_25	chr19	+	1975	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	2	-37	2	37	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGTCAGTTGTCATT	NA	False	NA	NA	False	AATATA	-14	NA	18609315	18629829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
Isoform_85183_716	chr19	+	2067	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	59	2392	-56	586	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAAAGCTTGTCGTGT	NA	False	NA	NA	False	AATAAA	-40	NA	18648186	18682172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
Isoform_85185_95	chr19	+	2151	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-27	2394	-27	584	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTACAAAGCTTGTCGT	NA	False	NA	NA	False	AATAAA	-38	NA	18648100	18682170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
Isoform_85188_157	chr19	+	3928	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	59	531	-56	-531	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTTGGTTGTTTCCCT	NA	False	NA	8	True	ATTAAA	-19	NA	18648186	18684033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
Isoform_85193_265	chr19	+	1521	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	17	2980	17	-2	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGGTGCCTTCTTAT	NA	False	NA	NA	False	AATAAA	-43	NA	18648144	18681584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
Isoform_85196_24	chr19	+	4012	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-23	529	-23	-529	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGGTTGTTTCCCTCA	NA	False	NA	10	True	ATTAAA	-21	NA	18648104	18684035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
Isoform_8521_75	chr10	+	930	4	FSM	ENSMUSG00000040280.11	ENSMUST00000035735.11	934	4	2	2	2	-2	multi-exon	FALSE	canonical	3	101	junction_1	3.29983164553722	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTGCGCCTGCTAAT	NA	False	NA	NA	False	AATACA	-19	NA	127350837	127353021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127350908_127351267_127351357_127352133_127352195_127352311
Isoform_85213_323	chr19	+	1639	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	39	-1	-4	1	multi-exon	FALSE	canonical	3	347	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	9353	False	NA	27	True	AATAAA	-20	NA	18690595	18695793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18691024_18694582
Isoform_85215_108	chr19	+	1632	2	FSM	ENSMUSG00000047044.8	ENSMUST00000055792.8	1631	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	77	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGTATCAGTGACTAA	9356	False	NA	26	True	AATAAA	-19	NA	18690598	18695792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18691024_18694585
Isoform_85216_43	chr19	+	1695	2	FSM	ENSMUSG00000047044.8	ENSMUST00000055792.8	1631	2	-63	-1	-20	1	multi-exon	FALSE	canonical	3	77	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	9294	False	NA	27	True	AATAAA	-20	NA	18690536	18695793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_18691024_18694585
Isoform_85217_374	chr19	+	2559	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	12	4814	12	-264	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTGTTTATTGGGT	NA	False	NA	17	True	AATAAA	-17	NA	21249653	21259390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
Isoform_85218_60	chr19	+	2587	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	-16	4814	-16	-264	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTGTTTATTGGGT	NA	False	NA	17	True	AATAAA	-17	NA	21249625	21259390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
Isoform_8523_58	chr10	+	3651	22	FSM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	113	11	97	-11	multi-exon	FALSE	canonical	3	34	junction_1	71.0521510108266	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACAAAATAAATAATC	2384	False	NA	-17	True	AATAAA	-11	NA	127478967	127496815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_85235_19	chr19	+	2950	5	NIC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	12	-265	intron_retention	FALSE	canonical	3	349	junction_1	13.0096118312577	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTCTTGTTTATTGGG	NA	False	NA	16	True	AATAAA	-16	NA	21249653	21259389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_21250107_21253789_21254454_21255018_21255123_21256988_21257115_21257786
Isoform_8524_47	chr10	+	3726	22	FSM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	38	11	22	-11	multi-exon	FALSE	canonical	3	34	junction_1	71.0521510108266	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACAAAATAAATAATC	2309	False	NA	-17	True	AATAAA	-11	NA	127478892	127496815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_85244_62	chr19	+	2662	4	FSM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	-400	-3	-60	3	multi-exon	FALSE	canonical	3	120	junction_3	15.3260852434302	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGCTTGTGTGCCTT	NA	False	NA	15	True	AGTAAA	-18	NA	21630488	21663004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_21630958_21655716_21656187_21658231_21658412_21661461
Isoform_85250_3	chr19	+	7082	25	FSM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	8	-423	6	390	multi-exon	FALSE	canonical	3	20	junction_2	23.4529301059709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTGAGACCTCCCT	NA	False	NA	18	True	ATTAAA	-22	NA	21755713	21836114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_21756151_21757534_21757617_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
Isoform_85254_65	chr19	+	6572	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	-4	34	-4	-1	multi-exon	FALSE	canonical	3	56	junction_1	16.2129029807244	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTGTATTTGTGAAT	NA	False	NA	19	True	AATAAA	-25	NA	21755717	21835690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
Isoform_85264_26	chr19	+	449	2	FSM	ENSMUSG00000044387.6	ENSMUST00000142712.2	414	2	-45	10	-45	-10	multi-exon	FALSE	canonical	3	58	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	23112218	23113071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_23112319_23112722
Isoform_8530_8	chr10	+	1631	6	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15179	0	-1235	0	3prime_fragment	FALSE	canonical	3	57	junction_1	71.0070419043069	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATCTACTGTACACA	839	False	NA	-6	True	AATAAA	-22	NA	127494033	127496826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_85306_498	chr19	+	4495	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-14	5	-14	-5	multi-exon	FALSE	canonical	3	482	junction_1	0	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCAGCCATTACGTTC	NA	False	NA	NA	False	AATAAA	-24	NA	23118575	23145493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_23119624_23142046
Isoform_8531_13	chr10	+	1578	4	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15394	11	-1020	-11	intron_retention	FALSE	canonical	3	216	junction_3	14.6590889515307	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACAAAATAAATAATC	1054	False	NA	-17	True	AATAAA	-11	NA	127494248	127496815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457
Isoform_85310_236	chr19	+	4549	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-70	7	-70	-7	multi-exon	FALSE	canonical	3	482	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTCCAGCCATTACGT	NA	False	NA	NA	False	AATAAA	-22	NA	23118519	23145491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_23119624_23142046
Isoform_8532_120	chr10	+	1501	5	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15394	11	-1020	-11	3prime_fragment	FALSE	canonical	3	216	junction_3	13.3229125944742	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACAAAATAAATAATC	1054	False	NA	-17	True	AATAAA	-11	NA	127494248	127496815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_85327_9	chr19	+	1415	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	13	11146	13	324	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTTGTTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	23664805	23697886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
Isoform_85329_6	chr19	+	9832	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	-7	2749	-7	-2749	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAAGCGCTATGTGTGT	NA	False	NA	11	True	AGTAAA	-14	NA	23664785	23706283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
Isoform_8533_76	chr10	+	1551	5	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15344	11	-1070	-11	3prime_fragment	FALSE	canonical	3	216	junction_3	13.3229125944742	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACAAAATAAATAATC	1004	False	NA	-17	True	AATAAA	-11	NA	127494198	127496815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_85330_5	chr19	+	1489	8	NIC	ENSMUSG00000074925.5	novel	12574	7	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	7.20544012166771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTATTTTTTAAATGAT	NA	False	NA	NA	False	AATAAA	-13	NA	23664757	23698323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421_23697719_23698129
Isoform_85331_31	chr19	+	5635	14	FSM	ENSMUSG00000032702.17	ENSMUST00000049400.15	5637	14	2	0	2	0	multi-exon	FALSE	canonical	3	26	junction_1	16.8104644783043	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214340	25411860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_25214682_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
Isoform_85333_3	chr19	+	5392	13	NIC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_7	21.5213072713222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	7	True	AATAAA	-16	NA	25214338	25411861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_25214682_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
Isoform_85334_3	chr19	+	2959	13	NIC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	24.7229088543849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	7	True	AATAAA	-16	NA	25214338	25411861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_25214682_25252111_25252199_25295668_25295797_25355774_25355895_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
Isoform_85335_3	chr19	+	5515	13	NIC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.6525935444266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGCCCCTGCTT	NA	False	NA	4	True	AATAAA	-13	NA	25214330	25411858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_25214682_25252111_25252199_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
Isoform_85337_3	chr19	+	5312	11	NIC	ENSMUSG00000032702.17	novel	3655	6	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	24.1072603171742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGCCCCTGCTT	432	False	NA	4	True	AATAAA	-13	NA	25384042	25411858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_25384398_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
Isoform_85342_136	chr19	+	2321	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	19	0	19	0	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	12	True	AATAAA	-20	NA	25483000	25581693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
Isoform_85343_6	chr19	+	2492	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	19	-171	19	171	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGTGGTTTTAGAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	25483000	25581864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
Isoform_85353_17	chr19	+	2446	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	-106	0	-106	0	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	12	True	AATAAA	-20	NA	25482875	25581693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
Isoform_85355_29	chr19	+	2447	3	NIC	ENSMUSG00000042372.6	novel	2391	2	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	6	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGATGTCTTTTCT	NA	False	NA	17	True	AATAAA	-13	NA	25587625	25601285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_25587719_25587937_25588632_25599625
Isoform_85360_15	chr19	+	2457	2	FSM	ENSMUSG00000042372.6	ENSMUST00000048935.6	2391	2	-67	1	-67	-1	multi-exon	FALSE	canonical	3	24	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGTTGATGTCTTTTC	NA	False	NA	16	True	AATAAA	-12	NA	25587833	25601284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_25588632_25599625
Isoform_85361_15	chr19	+	2358	4	FSM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	-16	-5	-16	5	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTGTTGAAGGAAACAG	NA	False	NA	NA	False	AATAAA	-26	NA	25649758	25656360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_25650123_25650779_25651341_25652914_25653018_25655030
Isoform_85362_12	chr19	+	5858	33	FSM	ENSMUSG00000024921.18	ENSMUST00000025862.15	5921	33	62	1	-5	-1	multi-exon	FALSE	canonical	2	6	junction_1	7.35245494715881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCGCCTTTTCTTTT	NA	False	NA	62	True	AATAAA	-17	NA	26582513	26755720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
Isoform_85363_5	chr19	+	5988	33	NIC	ENSMUSG00000024921.18	novel	5913	33	NA	NA	22	-3	combination_of_known_junctions	FALSE	canonical	2	10	junction_10	6.89535339467819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGTCGCCTTTTCTT	NA	False	NA	60	True	AATAAA	-15	NA	26584691	26755718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_26584944_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
Isoform_85366_15	chr19	+	3331	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	-178	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	9.07309140559716	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCATGGTTTTGATTAT	NA	False	NA	NA	False	ATTAAA	-10	NA	27194241	27227154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_27194349_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
Isoform_85368_4	chr19	+	3350	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	9.38675189355248	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTTTTGATTATTCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	27194410	27227158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_27194533_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
Isoform_85369_9	chr19	+	3875	19	FSM	ENSMUSG00000024924.15	ENSMUST00000167487.8	7971	19	-380	4476	-43	0	multi-exon	FALSE	canonical	3	7	junction_15	10.2837820299492	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATGGTTTTGATTATT	NA	False	NA	NA	False	ATTAAA	-11	NA	27194376	27227155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27223992_27224077_27224409_27224491_27225256_27225427_27226504
Isoform_85371_32	chr19	+	3747	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	2	106	2	1	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGTTTTGATTATTC	NA	False	NA	NA	False	ATTAAA	-12	NA	27194421	27227156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
Isoform_85382_3	chr19	+	7681	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	535	-4361	97	-8	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTTGCAAAGTCTACT	NA	False	NA	5	True	AATAAA	-16	NA	27194954	27231623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
Isoform_85385_71	chr19	+	3735	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	63	2	2	-2	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTGCCTCTCATCT	NA	False	NA	15	True	AATAAA	-25	NA	28812536	28891358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
Isoform_85387_37	chr19	+	3799	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	1	0	1	0	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCTCTCATCTGT	NA	False	NA	17	True	AATAAA	-27	NA	28812474	28891360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
Isoform_8539_14	chr10	+	1503	7	FSM	ENSMUSG00000040195.12	ENSMUST00000118612.8	1522	7	15	4	13	-4	multi-exon	FALSE	canonical	3	127	junction_4	19.2411595862157	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGTGAGTTTGACTA	NA	False	NA	NA	False	AATAAA	-19	NA	127512947	127531033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297
Isoform_85395_4	chr19	+	1102	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	128	2849	-5	736	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTTCAATTTCTTGAC	3949	False	NA	NA	False	CATAAA	-16	NA	28967879	28990322	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
Isoform_85397_4	chr19	+	4056	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	10	13	-5	-13	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGATAAGAGGGGTAT	3831	False	NA	NA	False	ATTAAA	-15	NA	28967761	28993158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
Isoform_85399_81	chr19	+	2644	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-131	2666	2	979	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGTGCTCACTGGCT	3838	False	NA	23	True	AATAAA	-17	NA	28967768	28994971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
Isoform_85400_86	chr19	+	2528	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-15	2666	0	979	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGTGCTCACTGGCT	3954	False	NA	23	True	AATAAA	-17	NA	28967884	28994971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
Isoform_85406_10	chr19	+	5304	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-131	6	2	-6	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAAGCTGTAGTTATGAT	3838	False	NA	5	True	AATAAA	-16	NA	28967768	28997631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
Isoform_8541_106	chr10	+	5987	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	14	1	14	-1	multi-exon	FALSE	canonical	3	115	junction_7	22.4499443206436	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGTCTTTTTAAATTA	NA	False	NA	15	True	AATAAA	-15	NA	127512948	127536917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
Isoform_85410_5	chr19	+	4102	7	NNC	ENSMUSG00000024780.8	novel	2944	7	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	71.7379490460477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTTTTCTGTGTTAG	3954	False	NA	3	True	AGTAAA	-15	NA	28967884	29004063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_29000923
Isoform_85412_9	chr19	+	3504	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	41	-1742	41	1656	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGCTGTCTTGGCCTGT	NA	False	NA	NA	False	TATAAA	-19	NA	29078815	29122985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
Isoform_85413_728	chr19	+	1766	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	45	-8	45	8	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGTGTAAATCAGAGTA	NA	False	NA	35	True	CATAAA	-27	NA	29078819	29121251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
Isoform_85414_47	chr19	+	1843	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	45	-85	45	-1	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAATCTGGGATTTTATC	NA	False	NA	112	True	NA	NA	NA	29078819	29121328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
Isoform_85415_30	chr19	+	1861	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	-50	-8	-50	8	multi-exon	TRUE	canonical	3	369	junction_1	16.9958634673264	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGTGTAAATCAGAGTA	NA	False	NA	35	True	CATAAA	-27	NA	29078724	29121251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
Isoform_8542_57	chr10	+	6014	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	-12	0	-10	0	multi-exon	TRUE	canonical	3	115	junction_7	22.4499443206436	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTCTTTTTAAATTAA	NA	False	NA	16	True	AATAAA	-16	NA	127512922	127536918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
Isoform_85421_9	chr19	+	1762	9	FSM	ENSMUSG00000024785.8	ENSMUST00000235900.2	1884	9	41	81	41	5	multi-exon	FALSE	canonical	3	6	junction_8	128.02514401476	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTGTAGTGTAAATCAGA	NA	False	NA	32	True	CATAAA	-24	NA	29078815	29121248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120546
Isoform_85423_19	chr19	+	2180	8	NIC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	45	1	intron_retention	FALSE	canonical	3	369	junction_1	17.8885438199983	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCACTGTAGTGTAAAT	NA	False	NA	28	True	CATAAA	-20	NA	29078819	29121244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
Isoform_85426_7	chr19	+	5279	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	-239	-10	-239	10	multi-exon	FALSE	canonical	3	14	junction_12	5.21749194749951	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCTGTTTTCAGTGG	NA	False	NA	NA	False	TTTAAA	-18	NA	29228988	29290490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
Isoform_85428_9	chr19	+	5067	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	-58	21	-58	-21	multi-exon	FALSE	canonical	3	14	junction_12	5.21749194749951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGATTTTAAATATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	29229169	29290459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
Isoform_85430_3	chr19	+	4573	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	-283	740	-283	0	multi-exon	FALSE	canonical	3	14	junction_12	5.21749194749951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTCTTTCTTGCTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	29228944	29289740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
Isoform_85433_6	chr19	+	5493	26	FSM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	52	1645	-1	-1	multi-exon	FALSE	canonical	3	11	junction_12	5.44558536798387	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGACTGTGGGATCCT	293	False	NA	NA	False	AATAAA	-15	NA	29499733	29582584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
Isoform_85439_17	chr19	+	4014	3	FSM	ENSMUSG00000024817.14	ENSMUST00000134518.8	3231	3	-87	-696	-87	696	multi-exon	FALSE	canonical	3	253	junction_1	21.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATGTTTTGCCTATAT	3998	False	NA	NA	False	AATAAA	-15	NA	30007825	30036908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_30008332_30016463_30016698_30033634
Isoform_85440_506	chr19	+	3577	16	FSM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	-37	-4	-37	4	multi-exon	FALSE	canonical	3	216	junction_4	27.709124048868	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4048	False	NA	29	True	AATAAA	-19	NA	30007875	30071126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
Isoform_85444_35	chr19	+	3322	15	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	68.3643077301933	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	4039	False	NA	25	True	AATAAA	-15	NA	30007866	30071122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_30008332_30016463_30016698_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
Isoform_85452_1205	chr19	+	2443	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	166	4	12	-4	multi-exon	FALSE	canonical	3	240	junction_4	28.9687331445474	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATCTCTGCACTCATTG	NA	False	NA	19	True	AATAAA	-26	NA	32463334	32492760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
Isoform_85453_69	chr19	+	2372	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	133	108	-21	-108	multi-exon	FALSE	canonical	3	240	junction_4	28.9687331445474	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATTGTAGAGATTTGA	NA	False	NA	-85	True	AATAAA	-16	NA	32463301	32492656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
Isoform_8546_41	chr10	+	5841	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	43.8461443572864	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGTCTTTTTAAATTA	NA	False	NA	15	True	AATAAA	-15	NA	127512948	127536917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
Isoform_85466_9	chr19	+	2418	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	87	5787	-11	2396	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGGAGTTTTTCCTTTAT	7680	False	NA	NA	False	TATAAA	-26	NA	32734983	32797773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
Isoform_85468_77	chr19	+	5325	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	130	2837	32	-2837	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGGTGTTTTATTA	7723	False	NA	NA	False	ATTAAA	-15	NA	32735026	32800723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
Isoform_85473_27	chr19	+	1980	11	FSM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	-2	10	-2	-8	multi-exon	FALSE	canonical	3	29	junction_1	14.1918990977247	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACAAGCTGTCCGGTTG	NA	False	NA	NA	False	AATAAA	-11	NA	34169626	34217723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
Isoform_85475_63	chr19	+	1964	11	FSM	ENSMUSG00000024776.19	ENSMUST00000054956.15	2024	11	50	10	50	-8	multi-exon	FALSE	canonical	3	23	junction_1	15.5630973780928	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACAAGCTGTCCGGTTG	NA	False	NA	NA	False	AATAAA	-11	NA	34169678	34217723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_34170032_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
Isoform_85476_6	chr19	+	1428	9	FSM	ENSMUSG00000024778.14	ENSMUST00000025691.13	1481	9	47	6	31	0	multi-exon	FALSE	canonical	1	1	junction_8	3.55096817783545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATTGCTCTGTTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	34268112	34305166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_34268145_34284524_34284679_34292578_34292717_34293968_34294078_34295989_34296052_34296182_34296237_34296709_34296790_34297960_34297986_34304392
Isoform_85481_35	chr19	+	5581	32	FSM	ENSMUSG00000024795.12	ENSMUST00000087341.7	5564	32	-2	-15	-2	5	multi-exon	FALSE	canonical	3	97	junction_15	68.2854387453211	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899758	34953150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
Isoform_85482_43	chr19	+	5464	31	NIC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_15	72.6510763092254	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	NA	False	NA	3	True	AATAAA	-14	NA	34899758	34953135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
Isoform_85486_66	chr19	+	5461	32	FSM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	-33	-5	-2	5	multi-exon	FALSE	canonical	3	103	junction_1	62.1311593110583	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899758	34953150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
Isoform_85487_79	chr19	+	5345	31	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	66.7043226985078	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAAGGCTCTTAAACT	NA	False	NA	13	True	AATAAA	-24	NA	34899767	34953145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
Isoform_8549_5	chr10	+	2280	19	ISM	ENSMUSG00000025401.10	ENSMUST00000079590.7	3439	27	1640	2183	1640	-2178	internal_fragment	FALSE	canonical	2	6	junction_6	3.4029761846919	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTGGACCGTTGGCA	NA	False	NA	NA	False	CATAAA	-15	NA	127542678	127554626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_127542794_127542995_127543043_127543222_127543287_127543486_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380
Isoform_85497_16	chr19	+	1097	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	5	-9	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	297.230701644362	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTACATATGGATTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	36061120	36082168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077640_36078208_36078239_36078633_36078672_36079220_36079301_36081735
Isoform_8550_36	chr10	+	3042	24	ISM	ENSMUSG00000025401.10	ENSMUST00000079590.7	3439	27	1634	2	1634	-2	3prime_fragment	FALSE	canonical	2	6	junction_6	3.36837286056462	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATGCGTATTTATTTC	NA	False	NA	20	True	AATAAA	-26	NA	127542672	127556807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_127542794_127542995_127543043_127543222_127543287_127543486_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
Isoform_85500_287	chr19	+	998	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-10	157	5	142	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTAACAGCTTAATTAA	NA	False	NA	25	True	AATAAA	-21	NA	36061120	36082020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
Isoform_85501_251	chr19	+	1151	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-10	4	5	-4	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGGATTTTTAAATTTT	NA	False	NA	NA	False	AATAAA	-22	NA	36061120	36082173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
Isoform_85503_3	chr19	+	6470	10	NIC	ENSMUSG00000024805.17	novel	6443	9	NA	NA	27	-6	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	38.9580337679114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGTTGGCCTGTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	36325735	36438364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
Isoform_85504_4	chr19	+	1466	9	FSM	ENSMUSG00000024805.17	ENSMUST00000225920.2	6443	9	208	4769	-20	-3	multi-exon	FALSE	canonical	3	10	junction_1	36.9382931386928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAATGCCAGCTTATTC	NA	False	NA	3	True	AATAAA	-15	NA	36325916	36433601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
Isoform_85505_3	chr19	+	1668	9	FSM	ENSMUSG00000024805.17	ENSMUST00000225920.2	6443	9	-2	4777	-2	1	multi-exon	FALSE	canonical	3	10	junction_1	36.9382931386928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCCAAAATGCCA	NA	False	NA	-5	True	AATAAA	-7	NA	36325706	36433593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
Isoform_85506_42	chr19	+	1627	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	0	-1	0	1	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCCAAAATGCCA	NA	False	NA	-5	True	AATAAA	-7	NA	36387147	36433593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
Isoform_85507_12	chr19	+	1668	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	-41	-1	-41	1	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCCAAAATGCCA	NA	False	NA	-5	True	AATAAA	-7	NA	36387106	36433593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
Isoform_85510_57	chr19	+	1567	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	0	-1	0	1	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCCAAAATGCCA	NA	False	NA	-5	True	AATAAA	-7	NA	36387147	36433593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
Isoform_85511_15	chr19	+	1609	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	-42	-1	-42	1	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCCAAAATGCCA	NA	False	NA	-5	True	AATAAA	-7	NA	36387105	36433593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
Isoform_85513_9	chr19	+	6366	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	-28	-4772	-28	-6	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGTTGGCCTGTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	36387119	36438364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
Isoform_85514_16	chr19	+	4747	21	FSM	ENSMUSG00000041180.14	ENSMUST00000169036.9	3842	21	-18	-887	11	-3	multi-exon	FALSE	canonical	3	14	junction_10	5.91840350094516	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCTTCAGTTCATTTT	NA	False	NA	6	True	ATTAAA	-13	NA	36532049	36598529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
Isoform_85515_13	chr19	+	4768	21	FSM	ENSMUSG00000041180.14	ENSMUST00000047247.12	4731	21	-44	7	-14	-4	multi-exon	FALSE	canonical	3	10	junction_10	6.40683229060977	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGGCTTCAGTTCATTT	NA	False	NA	5	True	ATTAAA	-12	NA	36532024	36598528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578831_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
Isoform_85525_1151	chr19	+	5867	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	16	598	16	-598	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGTAGCATGGTAAT	NA	False	NA	24	True	AATAAA	-13	NA	36811647	36870279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
Isoform_85526_141	chr19	+	6436	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	40	5	40	-5	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATAGTTCTCTTGATTG	NA	False	NA	11	True	AATAAA	-17	NA	36811671	36870872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
Isoform_8553_6	chr10	+	3281	2	FSM	ENSMUSG00000044617.9	ENSMUST00000054287.9	5960	2	-38	2717	-38	-2717	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGGTGGTACATAGCA	NA	False	NA	NA	False	ATTAAA	-11	NA	127575368	127580501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127575532_127577383
Isoform_85535_394	chr19	+	5662	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	40	-590	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811671	36870287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
Isoform_85537_63	chr19	+	6298	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTCTCTTGATTGTGC	NA	False	NA	14	True	AATAAA	-20	NA	36811623	36870875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
Isoform_8554_7	chr10	+	3194	2	FSM	ENSMUSG00000044617.9	ENSMUST00000054287.9	5960	2	64	2702	64	-2702	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTGCATTCTGA	NA	False	NA	NA	False	ATTAAA	-26	NA	127575470	127580516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127575532_127577383
Isoform_8558_333	chr10	+	1556	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	23	4	-1	0	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGATGTGCTCGGTTCT	1007	False	NA	14	True	TATAAA	-16	NA	127851063	127865902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
Isoform_85599_137	chr19	+	7162	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	49	-7	49	7	multi-exon	TRUE	canonical	3	111	junction_9	14.2774858907343	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTGTGTGTTGTTT	NA	False	NA	16	True	AATAAA	-18	NA	36903527	36990159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
Isoform_85601_17	chr19	+	8436	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	71	-1303	71	1303	multi-exon	FALSE	canonical	3	111	junction_9	14.2774858907343	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTTGAGAATGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	36903549	36991455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
Isoform_85609_21	chr19	+	1322	5	FSM	ENSMUSG00000023307.15	ENSMUST00000112391.8	1293	5	-28	-1	-3	1	multi-exon	FALSE	canonical	3	653	junction_3	54.8475158963467	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTTTCCTGTCATCC	NA	False	NA	13	True	AATAAA	-21	NA	37184938	37198476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037
Isoform_8561_70	chr10	+	1580	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	-4	7	0	-3	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTGATGTGCTCGGT	980	False	NA	11	True	TATAAA	-13	NA	127851036	127865899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
Isoform_85610_333	chr19	+	1798	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	14	-3	-14	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCTCATAGTTCATAGT	NA	False	NA	11	True	ATTAAA	-19	NA	37184938	37199536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
Isoform_85611_27	chr19	+	4115	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	-2303	-3	2303	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTATTTTGTCTGTTG	NA	False	NA	7	True	AATAAA	-17	NA	37184938	37201853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
Isoform_85614_354	chr19	+	1489	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	323	-3	-149	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCTTTTGTATATACTC	NA	False	NA	28	True	ATTAAA	-22	NA	37184938	37199227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
Isoform_85631_18	chr19	+	1851	6	NNC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	270.070064983145	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATAGTGTACTTTTGAC	NA	False	NA	22	True	ATTAAA	-30	NA	37184938	37199547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_37185304_37188069_37188273_37194581_37194755_37197701_37197886_37198037_37198205_37198788
Isoform_85632_12	chr19	+	1352	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	-155	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	293.769467440032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACGCCTCTTTTGTAT	NA	False	NA	22	True	ATTAAA	-16	NA	37184938	37199221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_37185304_37188069_37188273_37197701_37197886_37198037_37198205_37198788
Isoform_8564_10	chr10	+	2093	12	NIC	ENSMUSG00000025395.15	novel	1583	13	NA	NA	31	9	intron_retention	FALSE	canonical	3	557	junction_6	52.0176384579673	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTTGTAAAATGTATTA	1039	False	NA	11	True	AATAAA	-21	NA	127851095	127865861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
Isoform_85644_249	chr19	+	4871	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-52	0	-52	0	multi-exon	TRUE	canonical	3	280	junction_17	34.0452546631592	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37364798	37410307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
Isoform_8565_10	chr10	+	1368	12	NIC	ENSMUSG00000025395.15	novel	1583	13	NA	NA	25	-4	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	204.658958406903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTCTGATGTGCTCGG	1033	False	NA	10	True	TATAAA	-12	NA	127851089	127865898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_127851221_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
Isoform_85670_18	chr19	+	1711	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	31	60	31	-1	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACCCTGTTTGAATTCTC	NA	False	NA	19	True	AATGAA	-32	NA	37423288	37429119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
Isoform_85672_3	chr19	+	2079	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	-281	4	-281	-4	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTGGTGTGTGCACGC	NA	False	NA	75	True	NA	NA	NA	37422976	37429175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
Isoform_85673_6	chr19	+	1838	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	-36	0	-36	0	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGCACGCGTGT	NA	False	NA	79	True	NA	NA	NA	37423221	37429179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
Isoform_85674_15	chr19	+	1769	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	33	0	33	0	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGCACGCGTGT	NA	False	NA	79	True	NA	NA	NA	37423290	37429179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
Isoform_85675_84	chr19	+	2737	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	-5	811	-5	-7	multi-exon	TRUE	canonical	3	69	junction_16	11.2298193902402	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTCTCTGCTTGC	1864	False	NA	NA	False	AATAAA	-31	NA	37538860	37671696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
Isoform_85676_59	chr19	+	3546	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	-5	2	-5	-2	multi-exon	FALSE	canonical	3	69	junction_16	11.2298193902402	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTCGGAGATTCTCATT	1864	False	NA	27	True	ATTAAA	-32	NA	37538860	37672505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
Isoform_85680_80	chr19	+	2529	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	84.0640555296898	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043458	38062870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_85685_52	chr19	+	2559	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	96	junction_2	88.367917758024	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043452	38062870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38043530_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_85688_6	chr19	+	4901	8	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-29	1	intron_retention	FALSE	canonical	3	204	junction_1	56.8951775152323	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043429	38062870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38043530_38045857_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_85689_64	chr19	+	2411	10	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	90.951078967938	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043485	38062869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_38043530_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_85690_12	chr19	+	2394	9	FSM	ENSMUSG00000024989.16	ENSMUST00000096096.12	2366	9	-29	1	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	113.762636660724	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGTCTAGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	38043458	38062868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38043530_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_85691_18	chr19	+	2644	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	120.180419924933	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043517	38062870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38043766_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_85693_29	chr19	+	2705	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	103.855669079738	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043517	38062869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38043766_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_85694_21	chr19	+	2730	10	FSM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	28	-1	-19	1	multi-exon	FALSE	canonical	3	91	junction_1	107.147988119351	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043517	38062870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38043766_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_85695_14	chr19	+	2956	9	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-23	1	intron_retention	FALSE	canonical	3	91	junction_1	88.100705871179	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043513	38062870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38043766_38045857_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_85709_4	chr19	+	1422	3	FSM	ENSMUSG00000054200.8	ENSMUST00000067098.8	1401	3	-22	1	-22	-1	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAATCTCTATCTTGTG	NA	False	NA	NA	False	NA	NA	NA	38085496	38102710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38086142_38095829_38095959_38102062
Isoform_8571_7379	chr10	+	819	8	FSM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	70	-4	10	0	multi-exon	FALSE	canonical	3	9741	junction_1	845.476607528293	7379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	4982	False	NA	4	True	AATAAA	-28	NA	127871513	127884506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
Isoform_85710_617	chr19	+	3404	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	70	0	9	0	multi-exon	FALSE	canonical	3	381	junction_1	3	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384497	38394058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38384750_38388881_38389063_38391087
Isoform_85711_247	chr19	+	3662	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	-188	0	-188	0	multi-exon	FALSE	canonical	3	381	junction_1	3	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384239	38394058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38384750_38388881_38389063_38391087
Isoform_85723_34	chr19	+	3481	2	NIC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	-188	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384239	38394058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38384750_38391087
Isoform_85724_105	chr19	+	3228	2	NIC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384492	38394058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38384750_38391087
Isoform_85732_22	chr19	+	3893	13	FSM	ENSMUSG00000048720.9	ENSMUST00000037302.6	4209	13	58	258	-40	227	multi-exon	FALSE	canonical	3	18	junction_10	4.85555237731907	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGAGTCTTCATTACT	NA	False	NA	NA	False	AATAAA	-21	NA	38825080	38908109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
Isoform_85733_18	chr19	+	3928	13	FSM	ENSMUSG00000048720.9	ENSMUST00000037302.6	4209	13	15	266	15	219	multi-exon	FALSE	canonical	3	18	junction_10	4.85555237731907	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATGAGAAAATGAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	38825037	38908101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
Isoform_85746_2216	chr19	+	3047	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	46	2775	46	-2775	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	2216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTGGTCACATTATTT	NA	False	NA	13	True	AATAAA	-14	NA	38919404	38956720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
Isoform_85749_356	chr19	+	3073	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	22	2773	22	-2773	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGGTCACATTATTTTT	NA	False	NA	15	True	AATAAA	-16	NA	38919380	38956722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
Isoform_85750_389	chr19	+	5248	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	46	574	46	-574	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTTTGAGAAGCTT	NA	False	NA	14	True	AATAAA	-25	NA	38919404	38958921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
Isoform_85754_55	chr19	+	5284	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	1	583	1	-583	multi-exon	TRUE	canonical	3	1554	junction_5	143.18806117019	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTAATTTTCTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	38919359	38958912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
Isoform_85755_189	chr19	+	6235	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	46	-413	46	413	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTAAGTATATTGTCA	NA	False	NA	13	True	AATAAA	-16	NA	38919404	38959908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
Isoform_85756_50	chr19	+	6257	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	20	-409	20	409	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGATGTAAGTATATT	NA	False	NA	9	True	AATAAA	-12	NA	38919378	38959904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
Isoform_85801_17	chr19	+	3852	6	FSM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	-36	3	-36	-3	multi-exon	FALSE	canonical	3	13	junction_4	5.32916503778969	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTCTTGCTGCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	40819686	40837013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833488_40833649_40834142
Isoform_85804_4	chr19	+	6806	5	NIC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	25	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	51.4459668001292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40883173	40906386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_40883231_40885527_40885610_40896502_40896648_40899476_40899554_40899941
Isoform_85808_89	chr19	+	6809	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	25	6	25	-2	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	False	NA	39	True	ATTAAA	-16	NA	40883173	40906385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
Isoform_85809_37	chr19	+	6856	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	-21	5	-21	-1	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40883127	40906386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
Isoform_85811_3	chr19	+	7033	6	NNC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	49.3477456425316	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	False	NA	39	True	ATTAAA	-16	NA	40883169	40906385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_40883235_40885527_40885610_40891282_40891503_40896502_40896648_40899476_40899554_40899941
Isoform_85813_41	chr19	+	6403	8	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	30	792	intron_retention	FALSE	canonical	3	26	junction_7	29.110626434836	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGTGACTCTTGTTTT	NA	False	NA	7	True	NA	NA	NA	41471105	41575767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
Isoform_85814_6	chr19	+	6329	8	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	3	691	intron_retention	FALSE	canonical	3	26	junction_7	29.110626434836	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTGTTGTTGTGTT	NA	False	NA	-94	True	NA	NA	NA	41471078	41575666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
Isoform_85815_5	chr19	+	5910	5	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	11	795	intron_retention	FALSE	canonical	1	3	junction_4	41.0510353097215	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACTCTTGTTTTCAT	NA	False	NA	10	True	NA	NA	NA	41471086	41575770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41570216
Isoform_85816_3	chr19	+	6263	6	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	22	790	intron_retention	FALSE	canonical	1	2	junction_2	35.1590671093532	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGAGTGACTCTTGTT	NA	False	NA	5	True	NA	NA	NA	41471097	41575765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41471223_41471965_41472040_41534313_41534447_41540887_41541176_41544046_41544141_41570216
Isoform_85818_1200	chr19	+	1739	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	37	-1	37	1	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTTTGTCTTGTGTC	4097	False	NA	1	True	AATAAA	-18	NA	41900398	41907100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
Isoform_85819_4702	chr19	+	1680	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	97	-2	-18	2	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	4702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTGTCTTGTGTCT	4157	False	NA	2	True	AATAAA	-19	NA	41900458	41907101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
Isoform_85820_870	chr19	+	1813	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	-38	0	-38	0	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTACTGTTTGTCTTGTGT	4022	False	NA	0	True	AATAAA	-17	NA	41900323	41907099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
Isoform_85839_24	chr19	+	1908	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	121.95691862293	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4132	False	NA	10	True	AATAAA	-16	NA	41921921	41932535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_85841_101	chr19	+	1867	12	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	79	junction_8	134.380796050282	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4133	False	NA	10	True	AATAAA	-16	NA	41921922	41932535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_85842_8	chr19	+	2625	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	86	junction_7	104.324541695614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTAGCTTCTCTGTGCC	4125	False	NA	15	True	AATAAA	-21	NA	41921914	41932540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_85843_496	chr19	+	1818	11	FSM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	-6	9	4	0	multi-exon	FALSE	canonical	3	323	junction_7	37.0513157661101	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4133	False	NA	9	True	AATAAA	-15	NA	41921922	41932534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_85845_10	chr19	+	2734	10	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	397	junction_4	20.8439232344218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4133	False	NA	9	True	AATAAA	-15	NA	41921922	41932534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_85846_7	chr19	+	3503	9	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	-1	1	intron_retention	FALSE	canonical	3	397	junction_4	19.1294929363013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4128	False	NA	10	True	AATAAA	-16	NA	41921917	41932535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_85850_15	chr19	+	1906	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_5	120.241631725455	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4131	False	NA	10	True	AATAAA	-16	NA	41921920	41932535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927161_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_85852_11	chr19	+	1719	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	121.178422171606	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4131	False	NA	10	True	AATAAA	-16	NA	41921920	41932535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_41922105_41923278_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_85854_178	chr19	+	1786	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	-250	-7	-250	7	multi-exon	FALSE	canonical	3	94	junction_1	5.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGACTTCCTGTTTCA	NA	False	NA	17	True	AATAAA	-23	NA	41969951	42023089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_41970448_42020327_42020556_42022027
Isoform_85855_19	chr19	+	1988	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	-455	-4	-455	4	multi-exon	FALSE	canonical	3	94	junction_1	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCACATGACTTCCTGTT	NA	False	NA	14	True	AATAAA	-20	NA	41969746	42023086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_41970448_42020327_42020556_42022027
Isoform_85860_37	chr19	+	3585	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	22	-3	-1	3	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACATTTCTGTGGAGT	NA	False	NA	78	True	GATAAA	-17	NA	42078931	42110529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
Isoform_85861_874	chr19	+	3526	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	22	56	-1	0	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGTCCAGTTTCCTT	NA	False	NA	19	True	TTTAAA	-37	NA	42078931	42110470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
Isoform_85864_92	chr19	+	3581	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	-40	63	-39	-1	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGACCTCTCTGTCCAG	NA	False	NA	12	True	TTTAAA	-30	NA	42078869	42110463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
Isoform_85865_22	chr19	+	3706	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	21	-123	-2	123	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACTATAGTGTTTGCC	NA	False	NA	NA	False	GATAAA	-25	NA	42078930	42110649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
Isoform_85869_34	chr19	+	1916	10	FSM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	23	0	-1	0	multi-exon	FALSE	canonical	3	49	junction_9	126.842081267405	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGTCCAGTTTCCTT	NA	False	NA	19	True	TTTAAA	-37	NA	42078931	42110470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108424_42110033
Isoform_85870_21	chr19	+	1968	10	FSM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	-29	0	-29	0	multi-exon	FALSE	canonical	3	49	junction_9	126.842081267405	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGTCCAGTTTCCTT	NA	False	NA	19	True	TTTAAA	-37	NA	42078879	42110470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108424_42110033
Isoform_85874_19	chr19	+	4324	8	FSM	ENSMUSG00000025178.10	ENSMUST00000235988.2	4267	8	-54	-3	-30	3	multi-exon	FALSE	canonical	3	416	junction_7	29.3445402215868	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTCTGTCCAGTTTC	NA	False	NA	16	True	TTTAAA	-34	NA	42078878	42110467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945_42105006_42108231
Isoform_85881_137	chr19	+	3052	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	8	6	8	-6	multi-exon	FALSE	canonical	3	88	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGTTTGGGTCTCAC	NA	False	NA	23	True	AATAAA	-15	NA	42135846	42140136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42137999_42139236
Isoform_85883_43	chr19	+	3076	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	-16	6	-16	-6	multi-exon	FALSE	canonical	3	88	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGTTTGGGTCTCAC	NA	False	NA	23	True	AATAAA	-15	NA	42135822	42140136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42137999_42139236
Isoform_85885_170	chr19	+	2578	12	FSM	ENSMUSG00000018820.14	ENSMUST00000099443.11	2573	12	-4	-1	-4	1	multi-exon	FALSE	canonical	3	55	junction_1	33.3877792261314	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	8	True	AATAAA	-15	NA	42159028	42180157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
Isoform_85886_8	chr19	+	2537	11	NIC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	56.3670116291435	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	8	True	AATAAA	-15	NA	42159022	42180157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177960_42178043_42178821
Isoform_85888_363	chr19	+	2695	12	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	17.7223769463382	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	8	True	AATAAA	-15	NA	42159028	42180157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
Isoform_85889_10	chr19	+	5586	12	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	12	8	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	17.7223769463382	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCAGTTTCATAAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	42159017	42183037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
Isoform_85892_14	chr19	+	4310	11	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-4	1	intron_retention	FALSE	canonical	3	125	junction_1	17.592327873252	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	8	True	AATAAA	-15	NA	42159028	42180157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
Isoform_85894_139	chr19	+	3087	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	48	977	9	356	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCATTATGGTGTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	42507245	42579805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
Isoform_85896_3	chr19	+	4068	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	47	-3	8	3	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACATGTTACCTTATTAA	NA	False	NA	NA	False	NA	NA	NA	42507244	42580785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
Isoform_85897_3	chr19	+	4107	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	12	-7	12	7	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTACCTTATTAATTTT	NA	False	NA	NA	False	NA	NA	NA	42507209	42580789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
Isoform_8590_1278	chr10	+	1927	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	57	16	0	-16	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCACTCCTGAATTAG	903	False	NA	23	True	AATAAA	-24	NA	127894879	127913125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
Isoform_85900_6	chr19	+	1474	9	FSM	ENSMUSG00000025192.14	ENSMUST00000144314.2	1829	9	-28	383	3	-383	multi-exon	FALSE	canonical	2	6	junction_1	3.11247489949718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAAGAGTGCCTTTAAA	2779	False	NA	NA	False	ATTAAA	-19	NA	43678250	43710630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187
Isoform_85901_21	chr19	+	3017	13	FSM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	138	2756	1	-2756	multi-exon	FALSE	canonical	2	4	junction_9	3.63623737154524	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTTTGTTTGTT	2777	False	NA	NA	False	AATAAA	-20	NA	43678248	43719380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187_43710355_43713652_43713978_43715281_43715368_43716428_43716591_43718136
Isoform_85902_7	chr19	+	4785	13	FSM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	113	1013	-24	-1013	multi-exon	FALSE	canonical	2	4	junction_9	3.63623737154524	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGAGTTTCTGTTTG	2752	False	NA	NA	False	TATAAA	-25	NA	43678223	43721123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187_43710355_43713652_43713978_43715281_43715368_43716428_43716591_43718136
Isoform_85903_26	chr19	+	1247	9	FSM	ENSMUSG00000025193.15	ENSMUST00000112047.10	1233	9	-14	0	-14	0	multi-exon	FALSE	canonical	3	18	junction_1	5.45435605731786	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTCTCAGGTTCTTTC	9260	False	NA	16	True	AATAAA	-19	NA	43741522	43757077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751311_43751446_43753398_43753427_43755639_43755746_43756613
Isoform_85905_12	chr19	+	1266	9	FSM	ENSMUSG00000025193.15	ENSMUST00000112047.10	1233	9	-38	5	-38	2	multi-exon	FALSE	canonical	3	18	junction_1	5.45435605731786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATAGTCTCAGGTT	9236	False	NA	11	True	AATAAA	-14	NA	43741498	43757072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751311_43751446_43753398_43753427_43755639_43755746_43756613
Isoform_85906_7	chr19	+	1181	9	FSM	ENSMUSG00000025193.15	ENSMUST00000026199.14	1298	9	123	-6	-18	-1	multi-exon	FALSE	canonical	3	9	junction_5	8.4400459121974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATAGTCTCAGGTTCTTT	9295	False	NA	15	True	AATAAA	-18	NA	43741557	43757076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751341_43751446_43753398_43753427_43755639_43755746_43756613
Isoform_85908_7	chr19	+	3025	6	NNC	ENSMUSG00000025202.9	novel	3489	6	NA	NA	12294	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	132.355581673007	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGCTCCAGAGTCTT	727	False	NA	NA	False	NA	NA	NA	44204001	44232456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_44204124_44222661_44222793_44224209_44224416_44226814_44227048_44230098_44230749_44230773
Isoform_85909_13	chr19	+	746	3	FSM	ENSMUSG00000025202.9	ENSMUST00000237324.2	655	3	-84	-7	-84	7	multi-exon	FALSE	canonical	3	31	junction_1	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTCCTGTTCTTAGT	NA	False	NA	14	True	ATTAAA	-32	NA	44226169	44230464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_44226317_44226814_44227048_44230098
Isoform_8591_809	chr10	+	1720	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	1	279	1	15	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	847	False	NA	14	True	AATAAA	-15	NA	127894823	127912862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
Isoform_85910_3	chr19	+	916	3	FSM	ENSMUSG00000025202.9	ENSMUST00000237324.2	655	3	-254	-7	-254	7	multi-exon	FALSE	canonical	3	31	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTCCTGTTCTTAGT	NA	False	NA	14	True	ATTAAA	-32	NA	44225999	44230464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_44226317_44226814_44227048_44230098
Isoform_85912_7562	chr19	+	5031	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	420	4	18	-4	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	7562	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1487	False	NA	18	True	AATAAA	-19	NA	44282532	44295299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
Isoform_8592_304	chr10	+	1983	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	1	16	1	-16	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCACTCCTGAATTAG	847	False	NA	23	True	AATAAA	-24	NA	127894823	127913125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
Isoform_8593_3313	chr10	+	1693	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	28	279	28	15	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	3313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	874	False	NA	14	True	AATAAA	-15	NA	127894850	127912862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
Isoform_85939_182	chr19	+	6181	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	11	2	11	-2	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTATGTGACTTATTTA	NA	False	NA	9	True	NA	NA	NA	44551299	44564711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
Isoform_85944_7	chr19	+	6576	7	NIC	ENSMUSG00000036450.5	novel	6194	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	103	junction_3	12.0749971244533	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTATGTGACTTATTTA	NA	False	NA	9	True	NA	NA	NA	44551286	44564711	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44558396_44558665_44558777_44559552
Isoform_85952_169	chr19	+	6832	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	12	-595	0	484	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGTCTGGCAACTTTT	1055	False	NA	4	True	ATTAAA	-17	NA	44919601	44972222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
Isoform_85961_15	chr19	+	4357	15	FSM	ENSMUSG00000025207.17	ENSMUST00000026225.15	4548	15	191	0	1	0	multi-exon	FALSE	canonical	1	6	junction_7	2.98037800643215	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGTGTCTGCTTGGT	NA	False	NA	4	True	AATAAA	-18	NA	44977730	44991836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606
Isoform_85963_10	chr19	+	2192	5	FSM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	-1	4	-1	-4	multi-exon	FALSE	canonical	3	8	junction_1	67.8122407829147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTGCGTTTTTT	1657	False	NA	22	True	AATGAA	-15	NA	44994100	45001197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_44994627_44997718_44997960_44998570_44998679_44998856_44998999_45000022
Isoform_85965_226	chr19	+	3543	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	-55	0	-55	0	multi-exon	FALSE	canonical	3	97	junction_1	30.3593066455741	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2498	False	NA	26	True	AATGAA	-19	NA	44994941	45001201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
Isoform_85975_39	chr19	+	4452	4	ISM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	836	-1	-59	1	3prime_fragment	FALSE	canonical	3	153	junction_1	12.2836838484589	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCGTTTTTTCTTAC	2494	False	NA	27	True	AATGAA	-20	NA	44994937	45001202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_44997960_44998570_44998679_44998856_44998999_45000022
Isoform_85978_101	chr19	+	2763	5	FSM	ENSMUSG00000035342.15	ENSMUST00000179108.9	2798	5	-11	46	-11	35	multi-exon	FALSE	canonical	3	23	junction_1	54.407605166925	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGCAATGGA	1576	False	NA	NA	False	NA	NA	NA	45003627	45015504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45003753_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_85980_266	chr19	+	2779	5	FSM	ENSMUSG00000035342.15	ENSMUST00000039016.14	3062	5	317	-34	-18	34	multi-exon	FALSE	canonical	3	54	junction_1	41.4517792139252	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	1569	False	NA	NA	False	NA	NA	NA	45003620	45015503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_85983_270	chr19	+	2687	5	FSM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	-30	37	26	35	multi-exon	FALSE	canonical	3	72	junction_1	34.0954542424646	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGCAATGGA	121	False	NA	NA	False	NA	NA	NA	45006620	45015504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45006670_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_85988_5	chr19	+	2913	12	NNC	ENSMUSG00000025212.18	novel	2867	11	NA	NA	27	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	31.0847947204082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTTCAGTTATTCC	NA	False	NA	7	True	AATAAA	-18	NA	45036041	45044821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043_45044260_45044284
Isoform_85989_48	chr19	+	2719	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	149	-1	19	0	multi-exon	FALSE	canonical	3	75	junction_2	13.7767920794356	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATCTTCAGTTATTCCA	NA	False	NA	8	True	AATAAA	-19	NA	45036261	45044822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
Isoform_85990_33	chr19	+	2910	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	-46	3	-46	-3	multi-exon	FALSE	canonical	3	75	junction_2	13.7767920794356	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTTGATCTTCAGTTAT	NA	False	NA	4	True	AATAAA	-15	NA	45036066	45044818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
Isoform_85995_3	chr19	+	2539	5	FSM	ENSMUSG00000025213.12	ENSMUST00000026234.5	1380	5	-1161	2	-263	-2	multi-exon	FALSE	canonical	1	1	junction_1	1.6583123951777	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACACTGCTGCGGACA	4694	False	NA	NA	False	AATAAA	-19	NA	45063416	45067726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45064676_45065102_45065653_45066734_45066896_45066999_45067148_45067305
Isoform_85996_167	chr19	+	2301	16	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	157	junction_2	153.826684580046	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCTTGCTTTGCCGTT	NA	False	NA	20	True	TATAAA	-22	NA	45352191	45517735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_85999_14	chr19	+	2221	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	92	junction_3	189.441835885513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTCTCTTGCTTTGCCG	NA	False	NA	18	True	TATAAA	-20	NA	45352191	45517733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_86002_31	chr19	+	2191	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	163.999393353781	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCTTGCTTTGCCGTT	NA	False	NA	20	True	TATAAA	-22	NA	45352193	45517735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_86003_35	chr19	+	2155	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	163.999393353781	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352226	45517732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_86006_226	chr19	+	2259	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	2	717	1	3	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCTTGCTTTGCCGTT	NA	False	NA	20	True	TATAAA	-22	NA	45352191	45517735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_86008_19	chr19	+	2178	14	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	3	92	junction_2	165.00869620261	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352193	45517734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_45352326_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_86010_37	chr19	+	2193	14	FSM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	-123	-6	-24	2	multi-exon	FALSE	canonical	3	132	junction_1	132.758623339525	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352148	45517734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_86011_110	chr19	+	2150	14	FSM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	-78	-8	-2	4	multi-exon	FALSE	canonical	3	132	junction_1	132.758623339525	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352193	45517736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_86013_10	chr19	+	2070	13	NIC	ENSMUSG00000025217.16	novel	2064	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_1	165.14917499037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352191	45517732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_45352326_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_86020_3	chr19	+	1436	7	FSM	ENSMUSG00000041035.10	ENSMUST00000235805.2	687	7	-10	-739	-10	-5	multi-exon	FALSE	canonical	2	7	junction_1	211.143447815829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTACAATGGTAGCATG	3702	False	NA	NA	False	ATTAAA	-14	NA	45549063	45566721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45549147_45549425_45549524_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
Isoform_86021_137	chr19	+	806	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	14	533	-6	211	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTGACTGCCCCTTT	3706	False	NA	13	True	AGTAAA	-20	NA	45549067	45566193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
Isoform_86024_12	chr19	+	1331	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	17	5	-3	-5	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTACAATGGTAGCATG	3709	False	NA	NA	False	ATTAAA	-14	NA	45549070	45566721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
Isoform_86025_43	chr19	+	794	6	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	-3	213	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	159.454570332744	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTGACTGCCCCTTTCT	3709	False	NA	15	True	AGTAAA	-22	NA	45549070	45566195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_45549147_45553349_45553431_45560323_45560438_45560843_45560978_45565431_45565535_45565909
Isoform_86026_4	chr19	+	1360	6	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	159.454570332744	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTACAATGGTAGCATG	3669	False	NA	NA	False	ATTAAA	-14	NA	45549030	45566721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_45549147_45553349_45553431_45560323_45560438_45560843_45560978_45565431_45565535_45565909
Isoform_86027_12	chr19	+	5110	14	NIC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	-17	2	combination_of_known_junctions	TRUE	canonical	3	90	junction_2	137.218868059314	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045002	46061242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86031_20	chr19	+	5120	14	FSM	ENSMUSG00000055491.15	ENSMUST00000062322.11	5205	14	-20	105	-17	3	multi-exon	FALSE	canonical	3	90	junction_2	120.971168749579	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045002	46061243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86034_35	chr19	+	5117	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	3	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	121.186784289338	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045002	46061243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86035_10	chr19	+	5223	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	121.186784289338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCAGCGTGTCCTTTCT	NA	False	NA	4	True	AATAAA	-16	NA	46045002	46061349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86037_71	chr19	+	5107	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	3	156	junction_4	105.735071407002	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045002	46061242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86038_16	chr19	+	5213	14	NIC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_4	105.735071407002	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46045002	46061348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86040_17	chr19	+	5212	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	3	156	junction_4	105.996985554994	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46045000	46061348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86041_77	chr19	+	5104	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	3	156	junction_4	105.996985554994	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045002	46061242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86042_12	chr19	+	5099	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_10	135.667013166571	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045002	46061243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86043_137	chr19	+	5116	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	3	238	junction_7	79.6883723412051	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045002	46061242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86044_30	chr19	+	5223	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	238	junction_7	79.6883723412051	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCAGCGTGTCCTTTCT	NA	False	NA	4	True	AATAAA	-16	NA	46045002	46061349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86045_20	chr19	+	5108	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_10	119.266743952444	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045002	46061240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86047_142	chr19	+	5113	14	FSM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	25	108	-17	2	multi-exon	FALSE	canonical	3	236	junction_7	80.0611452719015	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045002	46061242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86048_30	chr19	+	5219	14	FSM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	25	2	-17	0	multi-exon	FALSE	canonical	3	236	junction_7	80.0611452719015	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46045002	46061348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86049_33	chr19	+	5108	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_10	119.48246386645	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045002	46061243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_86069_31	chr19	+	2446	13	FSM	ENSMUSG00000015176.12	ENSMUST00000235620.2	2441	13	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_11	313.587042674491	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	-1	True	NA	14	True	ATTAAA	-14	NA	46064422	46072900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86077_25	chr19	+	2443	13	FSM	ENSMUSG00000015176.12	ENSMUST00000225780.2	2978	13	43	492	-5	0	multi-exon	FALSE	canonical	0	0	junction_11	314.758494281286	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	-1	True	NA	14	True	ATTAAA	-14	NA	46064422	46072900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86096_294	chr19	+	2418	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTGATTTTCAGA	25	False	NA	15	True	ATTAAA	-15	NA	46064448	46072901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86097_28	chr19	+	2485	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTGATTTTCAGA	217	False	NA	15	True	ATTAAA	-15	NA	46064381	46072901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86099_170	chr19	+	3497	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-3	11	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCGTTGTGCACGTAA	25	False	NA	24	True	AATAAA	-27	NA	46064448	46073980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86101_25	chr19	+	2579	13	NIC	ENSMUSG00000015176.12	novel	2441	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	122	False	NA	14	True	ATTAAA	-14	NA	46064286	46072900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86102_23	chr19	+	3614	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCAGAGTTATGTCG	155	False	NA	12	True	AATAAA	-15	NA	46064319	46073968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86113_21	chr19	+	2578	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	-122	1067	-15	2	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGTGATTTTCAGAG	122	False	NA	16	True	ATTAAA	-16	NA	46064286	46072902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86116_216	chr19	+	2459	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	-6	1070	-6	-1	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTTGTGATTTTCA	238	False	NA	13	True	ATTAAA	-13	NA	46064402	46072899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86119_126	chr19	+	3521	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	1	1	1	1	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCAGAGTTATGTCG	245	False	NA	12	True	AATAAA	-15	NA	46064409	46073968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_86138_91	chr19	+	6414	40	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	14.1633654350608	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	9074	False	NA	18	True	AATAAA	-18	NA	46140970	46274948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
Isoform_86139_41	chr19	+	6426	40	FSM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	23	1	2	0	multi-exon	FALSE	canonical	3	37	junction_33	16.0207377114128	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	9074	False	NA	18	True	AATAAA	-18	NA	46140970	46274948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
Isoform_86143_140	chr19	+	2995	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-2	-14	-2	9	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCATCCCAGTCCC	NA	False	NA	37	True	AATAAA	-42	NA	46293180	46300475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
Isoform_86144_29	chr19	+	3036	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-54	-3	-54	-2	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCCCAATGTGCTGCCC	NA	False	NA	26	True	AATAAA	-31	NA	46293128	46300464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
Isoform_86145_9	chr19	+	3337	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-6	-352	-6	-11	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46293176	46300813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
Isoform_86147_34	chr19	+	3102	22	FSM	ENSMUSG00000025225.16	ENSMUST00000111881.4	3141	22	40	-1	40	1	multi-exon	FALSE	canonical	3	47	junction_12	7.7415743094745	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAATGTGCTGCCCATC	NA	False	NA	29	True	AATAAA	-34	NA	46294174	46300467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
Isoform_86149_31	chr19	+	3147	22	FSM	ENSMUSG00000025225.16	ENSMUST00000111881.4	3141	22	-5	-1	-5	1	multi-exon	FALSE	canonical	3	47	junction_12	7.7415743094745	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAATGTGCTGCCCATC	NA	False	NA	29	True	AATAAA	-34	NA	46294129	46300467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
Isoform_86151_5	chr19	+	1259	5	FSM	ENSMUSG00000025226.12	ENSMUST00000177667.2	1243	5	-19	3	-16	-3	multi-exon	FALSE	canonical	0	0	junction_1	11.8004237212059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGCGTGGTGCATAGG	6297	False	NA	5	True	AATAAA	-14	NA	46316606	46318881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46316741_46316841_46316966_46317113_46317268_46317526_46318033_46318540
Isoform_86152_36	chr19	+	1342	4	FSM	ENSMUSG00000025226.12	ENSMUST00000026256.9	1348	4	3	3	0	-2	multi-exon	FALSE	canonical	3	21	junction_3	4.08248290463863	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCGTGGTGCATAGGG	6316	False	NA	6	True	AATAAA	-15	NA	46316625	46318882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46316966_46317113_46317268_46317526_46318033_46318540
Isoform_86155_4	chr19	+	1127	3	ISM	ENSMUSG00000025226.12	ENSMUST00000177667.2	1243	5	362	3	362	-3	3prime_fragment	FALSE	canonical	3	21	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGCGTGGTGCATAGG	6678	False	NA	5	True	AATAAA	-14	NA	46316987	46318881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_46317268_46317526_46318033_46318540
Isoform_86156_680	chr19	+	2236	9	FSM	ENSMUSG00000025227.15	ENSMUST00000086969.13	2278	9	43	-1	-12	1	multi-exon	FALSE	canonical	3	169	junction_1	30.2561977122044	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	4241	False	NA	14	True	AGTAAA	-14	NA	46345361	46363692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
Isoform_86158_35	chr19	+	2064	8	FSM	ENSMUSG00000025227.15	ENSMUST00000142994.8	2051	8	-12	-1	-12	1	multi-exon	FALSE	canonical	3	15	junction_6	80.873294701764	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	4241	False	NA	14	True	AGTAAA	-14	NA	46345361	46363692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360620_46360815_46362884
Isoform_86159_8	chr19	+	2295	9	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	81.7288772405445	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTCTTTGGGTCTGTGC	4242	False	NA	11	True	AGTAAA	-11	NA	46345362	46363689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360311_46360547_46360620_46360815_46362884
Isoform_86162_14	chr19	+	2151	8	NIC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	79.7222218271745	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	4243	False	NA	14	True	AGTAAA	-14	NA	46345363	46363692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46345424_46354749_46354993_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
Isoform_86164_8	chr19	+	2541	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.9981212905332	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	4241	False	NA	14	True	AGTAAA	-14	NA	46345361	46363692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46345424_46350670_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
Isoform_86170_9	chr19	+	1812	7	ISM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	8	32011	8	-6	5prime_fragment	FALSE	canonical	3	32	junction_6	24.709422404329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATACCTGACTTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	46385364	46442476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597
Isoform_86171_3	chr19	+	4408	12	FSM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	90	-2751	4	-5	multi-exon	FALSE	canonical	3	32	junction_6	20.0218888484042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGAGTTGTGTGCTTC	NA	False	NA	14	True	ATTAAA	-14	NA	46385446	46477238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
Isoform_86172_65	chr19	+	4419	13	NNC	ENSMUSG00000025231.18	novel	1747	12	NA	NA	-29	-7	at_least_one_novel_splicesite	FALSE	non_canonical	3	28	junction_12	23.9890021097632	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTGAGTTGTGTGCT	NA	False	NA	12	True	ATTAAA	-12	NA	46385413	46477236	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293_46476755_46476774
Isoform_86173_3	chr19	+	1786	12	FSM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	-35	-4	-13	4	multi-exon	FALSE	canonical	3	32	junction_6	20.0218888484042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCAGAGTGCCACACC	NA	False	NA	NA	False	AATAAA	-17	NA	46385321	46474491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
Isoform_86175_23	chr19	+	1840	7	ISM	ENSMUSG00000025231.18	ENSMUST00000118440.3	2681	10	-132	22918	-2	-7	5prime_fragment	FALSE	canonical	3	63	junction_6	13.5123400391395	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATACCTGACTTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	46385332	46442475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600
Isoform_86177_5	chr19	+	2762	10	FSM	ENSMUSG00000025231.18	ENSMUST00000118440.3	2681	10	-96	15	12	-15	multi-exon	FALSE	canonical	3	63	junction_6	13.1101694577102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGTAACGTTAGATTT	NA	False	NA	NA	False	TATAAA	-17	NA	46385368	46465378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946
Isoform_86179_63	chr19	+	4519	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	2	1	2	-1	multi-exon	FALSE	canonical	3	63	junction_6	14.4473967456865	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTGTGTGCTTCTTTC	NA	False	NA	18	True	ATTAAA	-18	NA	46385336	46477242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
Isoform_86180_53	chr19	+	4415	13	NNC	ENSMUSG00000025231.18	novel	4522	12	NA	NA	-29	-8	at_least_one_novel_splicesite	FALSE	non_canonical	3	28	junction_12	20.5526086476199	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCCTGAGTTGTGTGC	NA	False	NA	11	True	ATTAAA	-11	NA	46385413	46477235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293_46476755_46476774
Isoform_86183_714	chr19	+	3179	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	1	400	1	-400	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGCACAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	46490141	46504887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
Isoform_86186_391	chr19	+	3446	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-259	393	-259	-393	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACAGCCCTTGTGGAGG	NA	False	NA	NA	False	NA	NA	NA	46489881	46504894	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
Isoform_86197_39	chr19	+	3508	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-328	400	-328	-400	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGCACAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	46489812	46504887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
Isoform_86226_7	chr19	+	1265	11	ISM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	59	4205	59	2140	5prime_fragment	FALSE	canonical	3	36	junction_10	6.8622153857191	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGCTCATGCTCTGG	NA	False	NA	NA	False	TTTAAA	-25	NA	46561864	46581129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738
Isoform_86228_7	chr19	+	3170	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	21	14	21	-14	multi-exon	FALSE	canonical	3	36	junction_10	6.85384611817119	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATTTGAAAGAACATGAAA	NA	False	NA	1	True	AATAAA	-1	NA	46561826	46585320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
Isoform_86231_153	chr19	+	3901	6	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-8	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	57.2174798466343	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCTGCCGCTCCTTGTT	NA	False	NA	23	True	AATAAA	-24	NA	46587543	46645827	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403_46644714_46644738
Isoform_86239_138	chr19	+	3873	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	25	2	-4	2	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCCTGCCGCTCCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	46587547	46645826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
Isoform_86246_17	chr19	+	2143	6	NNC	ENSMUSG00000062376.8	novel	2176	5	NA	NA	12	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	70.5617460101435	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAGACCAATCATTTA	9083	False	NA	NA	False	AATAAA	-19	NA	46678356	46691822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953_46690433_46690454
Isoform_86248_5	chr19	+	585	5	ISM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	1	31365	1	-515	5prime_fragment	FALSE	canonical	3	174	junction_4	14.0801278403287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTATATGTTACTACTT	5975	False	NA	NA	False	AGTAAA	-17	NA	46695897	46698169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985
Isoform_86249_4	chr19	+	1701	11	NIC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	9	4	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	53.7699730332832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACAATGGATGTCTGTA	5983	False	NA	26	True	AATAAA	-36	NA	46695905	46729530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698101_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
Isoform_8625_18844	chr10	+	1765	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	33	118	0	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	18844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127919174	127926142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
Isoform_86251_198	chr19	+	1712	11	FSM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	20	4	20	4	multi-exon	FALSE	canonical	3	159	junction_6	16.3612346722367	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACAATGGATGTCTGTA	5994	False	NA	26	True	AATAAA	-36	NA	46695916	46729530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
Isoform_86252_6	chr19	+	1707	12	NNC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	48	-19	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	66.6961780410936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTTCACCTTGATAAT	6022	False	NA	3	True	AATAAA	-13	NA	46695944	46729507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46726951_46726998_46728899
Isoform_86253_4	chr19	+	1422	9	NIC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	11	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	60.665064081397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATAATTGATACCACAAT	5985	False	NA	15	True	AATAAA	-25	NA	46695907	46729519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46695976_46696194_46696239_46696508_46696637_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
Isoform_86256_6	chr19	+	1698	10	ISM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	243	14	24	-6	3prime_fragment	FALSE	canonical	3	159	junction_5	17.1859833786536	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAATTGATACCACAATG	6217	False	NA	16	True	AATAAA	-26	NA	46696139	46729520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
Isoform_86258_10	chr19	+	1778	9	NNC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.0973772683695	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGATGTCTGTAGTTT	6420	False	NA	30	True	AATAAA	-40	NA	46696342	46729534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708328_46708460_46708752_46708896_46713342_46713478_46728899
Isoform_8626_415	chr10	+	1883	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	33	0	0	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGGGCCTTGTGTTTC	NA	False	NA	11	True	ATTAAA	-22	NA	127919174	127926260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
Isoform_86261_24	chr19	+	3070	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	53	1832	44	-2	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGATCATGTTTTTGT	NA	False	NA	27	True	TTTAAA	-23	NA	46750087	46866799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_86262_37	chr19	+	3001	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	53	1901	44	-71	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTTTATCGTTTCTTT	NA	False	NA	13	True	AATAGA	-19	NA	46750087	46866730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_86265_32	chr19	+	3035	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	20	1900	11	-70	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTATCGTTTCTTTC	NA	False	NA	14	True	AATAGA	-20	NA	46750054	46866731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_86266_21	chr19	+	3290	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	53	1612	44	1	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	14	True	AAGAAA	-16	NA	46750087	46867019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_86270_18	chr19	+	3139	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	-10	1826	-10	4	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATGTTTTTGTTTCTAA	NA	False	NA	33	True	TTTAAA	-29	NA	46750024	46866805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_86273_4	chr19	+	3305	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	238	1412	229	201	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATGGTTTATCATTGG	NA	False	NA	3	True	AATGAA	-16	NA	46750272	46867219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_86275_14	chr19	+	2783	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	197	71	196	-71	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTTTATCGTTTCTTT	NA	False	NA	13	True	AATAGA	-19	NA	46750239	46866730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_86277_11	chr19	+	2951	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	31	69	30	-69	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTATCGTTTCTTTCA	NA	False	NA	15	True	AATAGA	-21	NA	46750073	46866732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_86280_6	chr19	+	3038	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	10	3	9	-3	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGAGATCATGTTTTTG	NA	False	NA	26	True	TTTAAA	-22	NA	46750052	46866798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_86281_12	chr19	+	3084	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	185	-218	184	1	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	14	True	AAGAAA	-16	NA	46750227	46867019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_86282_71	chr19	+	2684	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	554	2	554	-2	multi-exon	FALSE	canonical	3	49	junction_2	0.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGACTCGTGCTCTGTG	NA	False	NA	10	True	ATTAAA	-13	NA	47003690	47013764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47004259_47010271_47010397_47011773
Isoform_86286_14	chr19	+	3257	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	49	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGACTCGTGCTCTGTGGT	NA	False	NA	12	True	ATTAAA	-15	NA	47003119	47013766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47004259_47010271_47010397_47011773
Isoform_86289_3	chr19	+	3351	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	-112	1	-112	-1	multi-exon	FALSE	canonical	3	49	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGACTCGTGCTCTGTGG	NA	False	NA	11	True	ATTAAA	-14	NA	47003024	47013765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47004259_47010271_47010397_47011773
Isoform_86292_364	chr19	+	3252	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	6	2	6	-2	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATTGTACAAATTGAG	NA	False	NA	13	True	AATAAA	-25	NA	47056190	47071916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
Isoform_86295_8	chr19	+	3410	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	6	-1	intron_retention	FALSE	canonical	3	160	junction_3	41.2349486195184	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTGTACAAATTGAGT	NA	False	NA	14	True	AATAAA	-26	NA	47056190	47071917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070761_47070865
Isoform_86296_26	chr19	+	3091	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	71.9305220334178	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATTGTACAAATTGAG	NA	False	NA	13	True	AATAAA	-25	NA	47056186	47071916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47070247_47070426_47070582_47070761_47070865
Isoform_86303_322	chr19	+	6040	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	-2	723	-2	-109	multi-exon	FALSE	canonical	3	156	junction_7	35.2497097976186	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTGTGTGTGTGTA	NA	False	NA	22	True	NA	NA	NA	47079204	47119581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
Isoform_86305_13	chr19	+	6766	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	0	-5	0	5	multi-exon	FALSE	canonical	3	156	junction_7	35.2497097976186	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCTTTAAGTTTTCTA	NA	False	NA	NA	False	ATTAAA	-25	NA	47079206	47120309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
Isoform_86306_7	chr19	+	6359	35	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	32	-107	intron_retention	FALSE	canonical	3	156	junction_7	35.7605938038528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGTGTGTGTGTAAA	NA	False	NA	24	True	NA	NA	NA	47079238	47119583	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
Isoform_86331_3	chr19	+	2293	3	FSM	ENSMUSG00000006435.17	ENSMUST00000235326.2	4034	3	-121	1862	81	353	multi-exon	FALSE	canonical	3	49	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCGAAGCCCGTGTGT	NA	False	NA	NA	False	AGTAAA	-17	NA	47167339	47230188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47167991_47228240_47228483_47228788
Isoform_86332_3	chr19	+	2377	3	FSM	ENSMUSG00000006435.17	ENSMUST00000235326.2	4034	3	-93	1750	-93	465	multi-exon	FALSE	canonical	3	49	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATATTGAGAGCCCAAA	NA	False	NA	NA	False	NA	NA	NA	47167367	47230300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47167991_47228240_47228483_47228788
Isoform_86334_6	chr19	+	1741	4	FSM	ENSMUSG00000006435.17	ENSMUST00000235290.2	1060	4	-214	-467	-85	467	multi-exon	FALSE	canonical	3	8	junction_3	19.5675468285856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATTGAGAGCCCAAACG	NA	False	NA	NA	False	NA	NA	NA	47167375	47230302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47229740
Isoform_86336_49	chr19	+	3999	6	FSM	ENSMUSG00000006435.17	ENSMUST00000111808.11	4158	6	153	6	-49	0	multi-exon	FALSE	canonical	3	49	junction_1	24.9206741481847	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	34	True	AATAAA	-16	NA	47167411	47247874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
Isoform_86337_8	chr19	+	2393	6	FSM	ENSMUSG00000006435.17	ENSMUST00000111808.11	4158	6	117	1648	-85	-1642	multi-exon	FALSE	canonical	3	49	junction_1	24.9206741481847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCCCTGGAGGATTGGG	NA	False	NA	NA	False	ATTAAA	-12	NA	47167375	47246232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
Isoform_86338_63	chr19	+	3193	4	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	11424	0	11424	0	3prime_fragment	FALSE	canonical	3	53	junction_1	25.0909456887451	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	34	True	AATAAA	-16	NA	47228773	47247874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_47229111_47241557_47242248_47245150_47245298_47245855
Isoform_86340_5	chr19	+	2549	3	NIC	ENSMUSG00000006435.17	novel	3606	6	NA	NA	11378	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	55.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	34	True	AATAAA	-16	NA	47228727	47247874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_47229111_47245150_47245298_47245855
Isoform_86341_92	chr19	+	2550	3	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	24514	0	24514	0	3prime_fragment	FALSE	canonical	3	77	junction_1	18.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	1527	False	NA	34	True	AATAAA	-16	NA	47241863	47247874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_47242248_47245150_47245298_47245855
Isoform_86349_311	chr19	+	7323	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	-45	0	-45	0	multi-exon	FALSE	canonical	3	226	junction_7	39.0368471130284	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568071	47633685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
Isoform_86354_7	chr19	+	7525	17	NIC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-45	-2	intron_retention	FALSE	canonical	3	226	junction_7	40.0169885798519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGGGAATTTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	47568071	47633683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
Isoform_86356_6	chr19	+	7541	19	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-56	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	102.985570726087	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	20	True	AATAAA	-16	NA	47568060	47633684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_47568783_47591238_47591447_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
Isoform_86373_687	chr19	+	1482	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	77	-49	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTCATTTTCCTCA	NA	False	NA	19	True	ATTAAA	-25	NA	47720197	47723978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_47720261_47721068_47721192_47721240_47721428_47721957_47722351_47723262
Isoform_86384_221	chr19	+	1111	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	68	3	0	-2	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGTCCAAACCACCT	8536	False	NA	18	True	ATTAAA	-27	NA	47843476	47853226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
Isoform_86386_31	chr19	+	1160	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	18	4	18	-3	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGAGTCCAAACCACC	8486	False	NA	17	True	ATTAAA	-26	NA	47843426	47853225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
Isoform_86387_15	chr19	+	1315	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	-137	4	-137	-3	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGAGTCCAAACCACC	8331	False	NA	17	True	ATTAAA	-26	NA	47843271	47853225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
Isoform_86393_6	chr19	+	1324	9	FSM	ENSMUSG00000025069.16	ENSMUST00000056159.11	1351	9	5	22	-5	4	multi-exon	FALSE	canonical	0	0	junction_7	0.992156741649222	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGTCTAATTATCACG	101	False	NA	NA	False	AATAAA	-14	NA	47854210	47874741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_47854369_47858124_47858200_47858647_47858763_47860092_47860243_47860454_47860564_47863268_47863492_47864834_47864937_47873094_47873202_47874456
Isoform_86396_12	chr19	+	4288	16	NIC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	70.764272215732	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATGCATTTGGTATAA	2523	False	NA	2	True	AATAAA	-11	NA	53131226	53235512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_53131521_53191844_53191907_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
Isoform_86402_89	chr19	+	4265	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-217	6	1	-6	multi-exon	TRUE	canonical	3	178	junction_5	22.1124214791929	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATGCATTTGGTATAA	2484	False	NA	2	True	AATAAA	-11	NA	53131187	53235512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
Isoform_86411_6	chr19	+	4125	14	FSM	ENSMUSG00000025026.16	ENSMUST00000050096.15	4297	14	45	127	5	-6	multi-exon	FALSE	canonical	1	4	junction_13	57.745923803991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATGCATTTGGTATAA	2528	False	NA	2	True	AATAAA	-11	NA	53131231	53235512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53233428
Isoform_86419_101	chr19	+	2642	6	FSM	ENSMUSG00000025025.15	ENSMUST00000003870.15	2627	6	-15	0	-15	0	multi-exon	FALSE	canonical	3	46	junction_1	71.8843515655528	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	NA	False	NA	18	True	AATAAA	-23	NA	53298933	53361724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53299405_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
Isoform_86422_9	chr19	+	2701	6	FSM	ENSMUSG00000025025.15	ENSMUST00000003870.15	2627	6	-74	0	-74	0	multi-exon	FALSE	canonical	3	46	junction_1	71.8843515655528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	NA	False	NA	18	True	AATAAA	-23	NA	53298874	53361724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53299405_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
Isoform_86423_268	chr19	+	2399	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	80	-139	32	0	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4494	False	NA	18	True	AATAAA	-23	NA	53317923	53361724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
Isoform_86425_75	chr19	+	2443	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	36	-139	-9	0	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4450	False	NA	18	True	AATAAA	-23	NA	53317879	53361724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
Isoform_86426_7	chr19	+	2344	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	-3	-1	-3	1	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCTTTATGATT	4411	False	NA	NA	False	TTTAAA	-26	NA	53317840	53361586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
Isoform_86439_25	chr19	+	2480	4	FSM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	-15	8	-15	-8	multi-exon	FALSE	canonical	3	31	junction_3	7.25718035235908	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGTGCTTGATCCTGTT	NA	False	NA	71	True	NA	NA	NA	53517524	53530854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53518128_53522256_53522406_53525887_53526108_53529346
Isoform_86454_2063	chr19	+	4154	29	FSM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	11	686	11	339	multi-exon	FALSE	non_canonical	3	891	junction_13	92.0610586535271	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAAGTGTTGCTTTCAG	NA	False	NA	71	True	ATTAAA	-14	NA	53588839	53633578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
Isoform_86456_56	chr19	+	4840	29	FSM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	11	0	11	0	multi-exon	FALSE	non_canonical	3	891	junction_13	92.0610586535271	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTGTGTAATTCATCA	NA	False	NA	NA	False	CATAAA	-14	NA	53588839	53634264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
Isoform_86496_9	chr19	+	4293	6	ISM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	166228	-1700	324	0	3prime_fragment	FALSE	canonical	3	12	junction_2	2.13541565040626	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCTGTGTCATGCAG	NA	False	NA	10	True	AATAAA	-18	NA	53831964	53855511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
Isoform_86499_30	chr19	+	2409	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	-35	7	-35	0	multi-exon	FALSE	canonical	3	114	junction_5	6.73954654285478	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTAGTGGGAGTGCATT	433	False	NA	15	True	AATAAA	-20	NA	53891694	53918284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
Isoform_86500_115	chr19	+	2317	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	55	9	-21	0	multi-exon	FALSE	canonical	3	114	junction_5	6.73954654285478	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGGGAGTGCA	523	False	NA	13	True	AATAAA	-18	NA	53891784	53918282	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
Isoform_86502_3	chr19	+	1791	13	FSM	ENSMUSG00000024975.14	ENSMUST00000165617.3	1733	13	-58	0	-17	0	multi-exon	FALSE	canonical	2	5	junction_12	33.2949779329489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTAGTGGGAGTGCATT	527	False	NA	15	True	AATAAA	-20	NA	53891788	53918284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513_53917624_53918147
Isoform_86510_56	chr19	+	3943	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	19	3	14	-3	multi-exon	FALSE	canonical	3	29	junction_1	123.021784148174	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGAGCTTGTGTGTGTGG	3951	False	NA	18	True	TATAAA	-21	NA	53933329	54021559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
Isoform_86529_141	chr19	+	2612	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	539	1092	539	950	multi-exon	FALSE	canonical	3	56	junction_1	11.2473730871055	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	55242339	55285060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
Isoform_86530_30	chr19	+	2894	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	256	1093	256	949	multi-exon	FALSE	canonical	3	56	junction_1	11.2473730871055	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGCCTGCAGTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	55242056	55285059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
Isoform_86534_4	chr19	+	3414	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	-263	1092	-263	950	multi-exon	FALSE	canonical	3	56	junction_1	11.2473730871055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	55241537	55285060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
Isoform_86536_3	chr19	+	537	3	ISM	ENSMUSG00000024983.11	ENSMUST00000225051.2	2919	4	-62	4065	0	-4065	5prime_fragment	FALSE	canonical	3	111	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGATGAGCAGCAGATC	NA	False	NA	NA	False	ATTAAA	-21	NA	55304726	55317005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_55304977_55310370_55310430_55316777
Isoform_86537_3	chr19	+	1605	4	FSM	ENSMUSG00000024983.11	ENSMUST00000226069.2	1599	4	-7	1	-7	-1	multi-exon	FALSE	canonical	3	4	junction_3	51.1620519091597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATCATGCATCTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	55304751	55355934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55354724
Isoform_86539_11	chr19	+	2794	6	NIC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	5	1414	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.5042855124657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTGAACTCAGAACT	NA	False	NA	NA	False	AATAAA	-21	NA	55304731	55436825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55434609
Isoform_86540_48	chr19	+	3424	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-51	32	5	-32	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAATTTAATTAAAGT	NA	False	NA	13	True	AATAAA	-26	NA	55304731	55614961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
Isoform_86547_3	chr19	+	2665	8	NNC	ENSMUSG00000024983.11	novel	3405	8	NA	NA	2	-805	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	37.8940520883353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCCGTGCTGATGCTG	NA	False	NA	NA	False	ATTAAA	-19	NA	55304728	55614188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487748_55612248
Isoform_86548_3	chr19	+	2614	8	NNC	ENSMUSG00000024983.11	novel	3405	8	NA	NA	-6	-809	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	37.8940520883353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTCTGCCGTGCTGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	55304775	55614184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487748_55612248
Isoform_86549_3	chr19	+	3425	8	NNC	ENSMUSG00000024983.11	novel	3405	8	NA	NA	4	-43	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	37.8940520883353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCCAGAATCAAAAGCAAT	NA	False	NA	2	True	AATAAA	-15	NA	55304730	55614950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487748_55612248
Isoform_86550_17	chr19	+	988	2	NNC	ENSMUSG00000024983.11	novel	1599	4	NA	NA	5	-14085	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACAGTGGTTTTCTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	55304731	55306985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_55304977_55306242
Isoform_86551_3	chr19	+	4047	13	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	19	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_11	22.7173147376377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCTGGCCGCTTGCTT	NA	False	NA	18	True	AATAAA	-19	NA	55730270	55922087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
Isoform_86552_3	chr19	+	3974	12	FSM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	19	-403	19	1	multi-exon	FALSE	canonical	3	39	junction_11	15.7312133791442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCTGGCCGCTTGCTT	NA	False	NA	18	True	AATAAA	-19	NA	55730270	55922087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
Isoform_86553_4	chr19	+	3541	12	NIC	ENSMUSG00000024985.21	novel	3629	15	NA	NA	247	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	27.6605755185341	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55731020	55922086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
Isoform_86554_4	chr19	+	3483	11	ISM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	755	-403	233	1	3prime_fragment	FALSE	canonical	3	39	junction_10	16.2098735343617	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCTGGCCGCTTGCTT	NA	False	NA	18	True	AATAAA	-19	NA	55731006	55922087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
Isoform_86555_89	chr19	+	2353	7	FSM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	-5	2	-5	-2	multi-exon	FALSE	canonical	3	21	junction_1	6.36177822799744	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTGACTGGTCCGGTC	NA	False	NA	12	True	AATAAA	-45	NA	56385555	56430774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_56385750_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
Isoform_86556_7	chr19	+	2440	7	FSM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	-89	-1	-89	1	multi-exon	FALSE	canonical	3	21	junction_1	6.36177822799744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGACTGGTCCGGTCTGA	NA	False	NA	15	True	ATTAAA	-16	NA	56385471	56430777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_56385750_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
Isoform_86558_3	chr19	+	1474	5	ISM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	194	27012	194	-15153	5prime_fragment	FALSE	canonical	3	84	junction_1	1.87082869338697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAATAAACAAAGC	NA	False	NA	NA	False	NA	NA	NA	56536886	56564923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586
Isoform_86559_3	chr19	+	3609	10	ISM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	202	7016	202	4843	5prime_fragment	FALSE	canonical	3	84	junction_1	13.0875494504236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTGTTGTCTTGCCTGG	NA	False	NA	NA	False	AATAAA	-19	NA	56536894	56584919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231
Isoform_8656_7	chr10	+	8436	30	NNC	ENSMUSG00000040054.18	novel	8369	30	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	121.396942293031	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTCAAGATTGCATGT	NA	False	NA	-5	True	AATAAA	-15	NA	127928638	127965167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
Isoform_86560_152	chr19	+	2527	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	213	5851	213	-5851	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACAAATTTCTTCATTT	NA	False	NA	NA	False	AATAAA	-28	NA	56536905	56586084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
Isoform_86563_62	chr19	+	3663	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	272	4656	272	-4656	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTGACTTCCGTTA	NA	False	NA	NA	False	ACTAAA	-23	NA	56536964	56587279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
Isoform_86566_6	chr19	+	2736	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	2	5853	2	-5853	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAACAAATTTCTTCAT	NA	False	NA	NA	False	AATAAA	-26	NA	56536694	56586082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
Isoform_86569_8	chr19	+	8387	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	202	2	202	-2	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGTTTCTGTCTTGA	NA	False	NA	15	True	ATTAAA	-15	NA	56536894	56591933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
Isoform_86570_4	chr19	+	4048	14	FSM	ENSMUSG00000025082.9	ENSMUST00000026068.8	4049	14	-2	3	-2	-3	multi-exon	TRUE	canonical	0	0	junction_13	1.44729905555591	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCGTTTGCCTAGGCAGG	NA	False	NA	NA	False	AATAAA	-14	NA	56862678	56900507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_56863011_56869556_56869619_56873454_56873530_56875309_56875444_56882197_56882308_56886305_56886498_56889959_56890094_56890667_56890801_56891898_56891955_56893910_56894019_56894821_56895395_56897263_56897816_56898121_56898248_56899046
Isoform_86573_28	chr19	+	5663	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	289	-1	-61	1	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACATTGTCGTATAT	NA	False	NA	3	True	AATAAA	-14	NA	57349400	57378019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
Isoform_86580_102	chr19	+	5583	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	368	0	18	0	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAACATTGTCGTATA	NA	False	NA	2	True	AATAAA	-13	NA	57349479	57378018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
Isoform_86587_4	chr19	+	4422	6	FSM	ENSMUSG00000025086.14	ENSMUST00000237166.2	2513	6	-19	-1890	8	1890	multi-exon	FALSE	canonical	3	178	junction_4	16.6901168360201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTCTCCTGCCTGTTC	NA	False	NA	10	True	TATAAA	-23	NA	57441351	57477339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504
Isoform_86588_72	chr19	+	3760	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	28	1	1	-1	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGAGTTCTTTGCAGTAA	NA	False	NA	17	True	AATAAA	-17	NA	57441371	57479436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
Isoform_86589_178	chr19	+	1661	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	28	2100	1	1888	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGCTCTCCTGCCTGT	NA	False	NA	8	True	TATAAA	-21	NA	57441371	57477337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
Isoform_86592_5	chr19	+	719	5	NNC	ENSMUSG00000025086.14	novel	2513	6	NA	NA	2	-9809	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	89.3602260516389	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCTAGATGTTGGATTA	NA	False	NA	NA	False	ATTAAA	-18	NA	57441372	57462249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57462023
Isoform_86594_5	chr19	+	3459	6	ISM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	-3	480776	-3	-480776	5prime_fragment	FALSE	canonical	3	21	junction_5	5.2	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAATATTCCTTTCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	57599462	57640999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689
Isoform_86595_3	chr19	+	1827	8	ISM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	-6	478161	-6	-478161	5prime_fragment	FALSE	canonical	3	13	junction_6	8.8132553229641	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTGTCCTTGAATAC	NA	False	NA	NA	False	AATATA	-18	NA	57599459	57643614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202
Isoform_86598_3	chr19	+	1413	6	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	1	-489969	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	10.1469207151727	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACATTGAAGAGTTTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	57599466	57631806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57631538
Isoform_86599_6	chr19	+	850	5	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	-2	25282	-2	-25282	5prime_fragment	FALSE	canonical	0	0	junction_1	16.7089048115069	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGGTTTTGTTATGAG	NA	False	NA	NA	False	AATAAA	-19	NA	58500450	58516178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_58500498_58500742_58500868_58501047_58501134_58514279_58514397_58515703
Isoform_86602_3	chr19	+	2099	14	FSM	ENSMUSG00000048029.11	ENSMUST00000200910.4	2567	14	-20	488	-20	0	multi-exon	FALSE	canonical	0	0	junction_6	1.9551176964829	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATGAGCTTTACTTTCG	NA	False	NA	NA	False	AATATA	-22	NA	58931836	58959365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_58932054_58933965_58934095_58935083_58935275_58941568_58941724_58943574_58943745_58943849_58943982_58946018_58946073_58947437_58947495_58948554_58948723_58951213_58951340_58952809_58953006_58956933_58957002_58957504_58957623_58959047
Isoform_86603_124	chr19	+	2339	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTACTTGATGTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	60800037	60824666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
Isoform_86607_68	chr19	+	2247	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	21	-1	1	1	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTACTTGATGTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	60800049	60824666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
Isoform_86609_481	chr19	+	2307	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	1	-1	1	1	multi-exon	FALSE	canonical	3	273	junction_1	50.1458809375207	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTACTTGATGTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	60800049	60824666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
Isoform_86619_277	chr19	+	3870	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTGTGGTGTT	3910	False	NA	22	True	TATAAA	-25	NA	53933288	54021563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
Isoform_86622_40	chr19	+	4011	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-10	145	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGGTTTCCCTACATT	3915	False	NA	11	True	AATATA	-13	NA	53933293	54021709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
Isoform_86627_8	chr19	+	2367	9	NNC	ENSMUSG00000025227.15	novel	2234	6	NA	NA	-4390	1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	65.4942745589261	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	1709	False	NA	14	True	AGTAAA	-14	NA	46350782	46363692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
Isoform_86629_51	chr19	+	5560	14	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-246	2	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	13.2338994508254	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCCCTGCTTCATC	NA	False	NA	8	True	AATAAA	-17	NA	25214092	25411862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
Isoform_86632_6	chr19	+	5406	13	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-222	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.7521928812198	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214116	25411860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_25214357_25252111_25252199_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
Isoform_86634_31	chr19	+	3697	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	23.4485545555329	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5738769	5752890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_5738802_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_86635_3	chr19	+	4031	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	-334	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	23.4485545555329	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5738435	5752890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_5738802_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_86636_12	chr19	+	2393	11	NNC	ENSMUSG00000004054.10	novel	441	3	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	29.7471006990597	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGTAATGTCACCTTT	NA	False	NA	5	True	AATAAA	-17	NA	5738771	5752888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_5738802_5739504_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_86638_11	chr19	+	1411	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46192	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.6507474747231	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTTTATCGTTTCTTT	NA	False	NA	13	True	AATAGA	-19	NA	46807906	46866730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_86640_7	chr19	+	1662	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46154	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.6507474747231	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	14	True	AAGAAA	-16	NA	46807944	46867019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_86641_4	chr19	+	1333	7	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46181	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.9605850546017	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTTTATCGTTTCTT	NA	False	NA	12	True	AATAGA	-18	NA	46807917	46866729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_86642_7	chr19	+	1594	7	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46154	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.9605850546017	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACGTGCCAAGTCTGTC	NA	False	NA	12	True	AAGAAA	-14	NA	46807944	46867017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_86643_30	chr19	+	6934	5	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	-544	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	40.2453413453036	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40882604	40906386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_40882790_40885527_40885610_40896502_40896648_40899476_40899554_40899941
Isoform_86645_4	chr19	+	6788	4	NNC	ENSMUSG00000049164.8	novel	1345	4	NA	NA	-544	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	47.2252286624662	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	False	NA	39	True	ATTAAA	-16	NA	40882604	40906385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_40882790_40885527_40885610_40899476_40899554_40899941
Isoform_86650_15	chr19	+	2696	5	NNC	ENSMUSG00000035342.15	novel	398	3	NA	NA	376	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.1443684199946	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	2152	False	NA	NA	False	NA	NA	NA	45004203	45015503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_45004263_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_86658_9	chr19	+	8125	37	NNC	ENSMUSG00000067889.8	novel	8299	37	NA	NA	-381	-6	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	10.212669147246	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTCTGGGTGTTGTTG	5180	False	NA	7	True	ATTAAA	-17	NA	4762030	4802382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_4762341_4768846_4769026_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
Isoform_86663_10	chr19	+	2379	22	NNC	ENSMUSG00000024981.7	novel	455	3	NA	NA	-295	948	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	18.582902438493	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTGCCTGCAGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	55241505	55285058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_55241534_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
Isoform_86664_5	chr19	+	6825	5	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	290	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	48.8588528313959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40883438	40906386	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_40883515_40885527_40885610_40896502_40896648_40899476_40899554_40899941
Isoform_86666_7	chr19	+	1232	5	NNC	ENSMUSG00000025226.12	novel	1243	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.9772492000501	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	6316	False	NA	8	True	AATAAA	-17	NA	46316625	46318884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_46316730_46316841_46316966_46317113_46317268_46317526_46318033_46318540
Isoform_86667_8	chr19	+	2294	7	NNC	ENSMUSG00000025076.13	novel	1603	2	NA	NA	-319	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.8988794990677	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTCCTGACTGGTCCGG	NA	False	NA	10	True	AATAAA	-43	NA	56385241	56430772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_56385379_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
Isoform_86669_3	chr19	+	2693	2	Antisense	novelGene_ENSMUSG00000052920.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTGTGTTCTGTTCA	5790	False	NA	NA	False	NA	NA	NA	31091337	31096950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_31091557_31094476
Isoform_86670_3	chr19	+	573	3	Intergenic	novelGene_5789	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTATGTCTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	38337145	38338053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_38337292_38337531_38337604_38337698
Isoform_86671_5	chr19	+	6217	24	NNC	ENSMUSG00000024754.14	novel	6667	25	NA	NA	6166	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	22.0978234136742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTATTTGTGAATC	NA	False	NA	20	True	AATAAA	-26	NA	21761917	21835691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_21761995_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
Isoform_86672_4	chr19	+	2633	11	NNC	ENSMUSG00000024927.9	novel	786	5	NA	NA	-12774	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	26.3590591637866	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5674736	5698158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_5675013_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
Isoform_86673_5	chr19	+	341	2	Intergenic	novelGene_5795	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTAGTCTTGGTTTCCA	NA	False	NA	NA	False	NA	NA	NA	39948009	39960198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_39948197_39960044
Isoform_86675_3	chr19	+	1464	9	NNC	ENSMUSG00000024805.17	novel	430	5	NA	NA	-125	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	39.2037944592102	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCCAAAATGCCA	NA	False	NA	-5	True	AATAAA	-7	NA	36387022	36433593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_36387082_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
Isoform_86676_3	chr19	+	1317	5	NNC	ENSMUSG00000036908.18	novel	1991	10	NA	NA	731	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	10.2316909648406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGTAGGTTGTGTTCT	362	False	NA	NA	False	AATAAA	-20	NA	3993170	3999340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_3993199_3993528_3993712_3994022_3994297_3997006_3997126_3998627
Isoform_86677_3	chr19	+	1391	5	NNC	ENSMUSG00000036908.18	novel	1991	10	NA	NA	753	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.2361025271221	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGTAGGTTGTGTTCT	384	False	NA	NA	False	AATAAA	-20	NA	3993192	3999340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr19_+_3993295_3993528_3993712_3994022_3994297_3997006_3997126_3998627
Isoform_86679_5	chr19	+	1327	1	Intergenic	novelGene_5702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCTACCCTGCAACATAA	NA	False	NA	NA	False	NA	NA	NA	23018391	23019718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_23018400_23019700
Isoform_86681_13	chr19	-	2181	2	Genic_Genomic	ENSMUSG00000097930.3	novel	816	2	NA	NA	-7	-36339	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAATAAATAAAAAA	4883	False	NA	NA	False	NA	NA	NA	23053295	23051092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_23051975_23051996
Isoform_86683_28	chr19	-	173	1	Intergenic	novelGene_5703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	4408	False	NA	NA	False	NA	NA	NA	23053770	23053597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_23053600_23053800
Isoform_86684_3	chr19	+	581	1	Intergenic	novelGene_5704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACCTAATAAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	23060425	23061006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_23060400_23061000
Isoform_86687_4	chr19	-	401	1	Intergenic	novelGene_5705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAAAATCAAAACA	NA	False	NA	NA	False	NA	NA	NA	23064895	23064494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_23064500_23064900
Isoform_86688_990	chr19	-	168	1	Intergenic	novelGene_5706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	990	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAAAGAAT	9994	False	NA	NA	False	NA	NA	NA	23065922	23065754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_23065800_23065900
Isoform_86690_4	chr19	-	4109	1	Intergenic	novelGene_5707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	4775	False	NA	NA	False	NA	NA	NA	23071141	23067032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_23067000_23071100
Isoform_86691_12	chr19	+	177	1	Intergenic	novelGene_5708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAAAAAAAAGATTTATT	1411	False	NA	NA	False	NA	NA	NA	23089340	23089517	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_23089300_23089500
Isoform_86693_3	chr19	+	591	1	NIC	ENSMUSG00000044387.6	novel	414	2	NA	NA	217	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	23112480	23113071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_23112500_23113100
Isoform_86719_4	chr19	+	180	1	Intergenic	novelGene_5709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTCTTAATACACTCA	NA	False	NA	NA	False	NA	NA	NA	23175465	23175645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_23175500_23175600
Isoform_86725_16	chr19	+	178	1	Intergenic	novelGene_5583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACAGATGTATTT	1796	False	NA	NA	False	NA	NA	NA	4142101	4142279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_4142100_4142300
Isoform_86730_51	chr19	+	643	1	FSM	ENSMUSG00000051255.7	ENSMUST00000056396.7	633	1	-13	3	-13	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAAGTTCGTGCTTT	NA	False	NA	NA	False	AAAAAG	-23	NA	23653198	23653841	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_23653200_23653800
Isoform_86733_54	chr9	+	176	1	Intergenic	novelGene_11623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGCTAGCT	NA	False	NA	NA	False	NA	NA	NA	103160655	103160831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_103160700_103160800
Isoform_86734_14	chr19	+	174	1	Intergenic	novelGene_5584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACAGGGAGAT	5268	False	NA	NA	False	NA	NA	NA	4145573	4145747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_4145600_4145700
Isoform_86735_13	chr19	+	4115	1	Intergenic	novelGene_5711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	24080109	24084224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_24080100_24084200
Isoform_86736_4	chr19	+	6106	1	Antisense	novelGene_ENSMUSG00000024812.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCACTCTTCCCTCCTGGC	NA	False	NA	NA	False	NA	NA	NA	24114707	24120813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_24114700_24120800
Isoform_86739_3	chr19	+	183	1	Intergenic	novelGene_5712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGAAACCTTTTGC	NA	False	NA	NA	False	NA	NA	NA	24166712	24166895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_24166700_24166900
Isoform_86740_3	chr19	+	173	1	Intergenic	novelGene_5713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAATTATTTA	7000	False	NA	NA	False	NA	NA	NA	24204565	24204738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_24204600_24204700
Isoform_86741_5	chr19	-	2852	1	NIC	ENSMUSG00000024847.16	novel	1378	7	NA	NA	28	-440	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	3930	False	NA	NA	False	NA	NA	NA	4171547	4168695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_4168700_4171500
Isoform_86742_7	chr19	-	188	1	Intergenic	novelGene_5714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATAAGTTTAGATTTAG	NA	False	NA	NA	False	NA	NA	NA	24230997	24230809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_24230800_24231000
Isoform_86743_4	chr19	-	1885	1	NIC	ENSMUSG00000059363.11	novel	1114	5	NA	NA	18	-16841	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24257951	24256066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_24256100_24258000
Isoform_86744_41	chr7	+	181	1	Intergenic	novelGene_10406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130450694	130450875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_130450700_130450900
Isoform_86746_18	chr19	-	1366	1	FSM	ENSMUSG00000074922.2	ENSMUST00000099556.2	855	1	-99	-412	-99	412	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTCATGGCACACTAA	NA	False	NA	NA	False	AGTAAA	-18	NA	24454819	24453453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_24453500_24454800
Isoform_86751_17	chr19	-	306	1	Intergenic	novelGene_5717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGAACACATTCCA	1441	False	NA	NA	False	NA	NA	NA	24517300	24516994	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_24517000_24517300
Isoform_86757_24	chr19	-	177	1	Intergenic	novelGene_5718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTGTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	24921207	24921030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_24921000_24921200
Isoform_86758_12	chr19	-	483	1	NIC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	38	-13492	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	24938927	24938444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_24938400_24938900
Isoform_86759_3	chr19	+	176	1	Intergenic	novelGene_5719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATTGTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	24945593	24945769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_24945600_24945800
Isoform_86760_12	chr19	-	181	1	Intergenic	novelGene_5720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACATCTCAGGGT	2859	False	NA	NA	False	NA	NA	NA	25000063	24999882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_24999900_25000100
Isoform_86763_33	chr6	-	176	1	Intergenic	novelGene_9365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	51496494	51496318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_51496300_51496500
Isoform_86765_4	chr19	-	175	1	Intergenic	novelGene_5723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	25242934	25242759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_25242800_25242900
Isoform_86767_39	chr19	-	1672	2	Antisense	novelGene_ENSMUSG00000032702.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25402965	25401267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_25402704_25402729
Isoform_86768_31	chr19	+	170	1	Intergenic	novelGene_5724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAGGCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	25450786	25450956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_25450800_25451000
Isoform_86776_30	chr19	+	175	1	Intergenic	novelGene_5725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAGTTCATTAA	NA	False	NA	NA	False	NA	NA	NA	28311478	28311653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_28311500_28311700
Isoform_86777_3	chr19	+	3025	1	Intergenic	novelGene_5726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28460804	28463829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_28460800_28463800
Isoform_86779_20	chr19	+	179	1	Intergenic	novelGene_5727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGATTTTGTTAAATA	NA	False	NA	NA	False	NA	NA	NA	28467621	28467800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_28467600_28467800
Isoform_86780_32	chr19	+	181	1	Intergenic	novelGene_5728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTAGCTCATTAA	NA	False	NA	2	True	NA	NA	NA	28638109	28638290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_28638100_28638300
Isoform_86781_24	chr19	+	176	1	Intergenic	novelGene_5729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	28676743	28676919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_28676700_28676900
Isoform_86784_15	chr19	+	330	1	Intergenic	novelGene_5730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAGAAATT	NA	False	NA	NA	False	AATAAA	-25	NA	28750450	28750780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_28750400_28750800
Isoform_86786_22	chr19	+	178	1	Antisense	novelGene_ENSMUSG00000117905.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	3141	False	NA	NA	False	NA	NA	NA	4218980	4219158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_4219000_4219200
Isoform_86787_24	chr19	+	173	1	Intergenic	novelGene_5731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGCCAGAGAGAGAAGAAAA	5105	False	NA	NA	False	NA	NA	NA	28898146	28898319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_28898100_28898300
Isoform_86789_38	chr19	-	191	1	Intergenic	novelGene_5732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTAAAAAGTAAATT	NA	False	NA	NA	False	NA	NA	NA	28899866	28899675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_28899700_28899900
Isoform_86790_24	chr19	+	2864	1	FSM	ENSMUSG00000040105.4	ENSMUST00000045674.4	2859	1	-17	12	-17	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGGTGAAATCTTTAAT	NA	False	NA	NA	False	AATAAA	-23	NA	28941335	28944199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_28941300_28944200
Isoform_86795_16	chr19	-	1903	1	Antisense	novelGene_ENSMUSG00000118038.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29048215	29046312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_29046300_29048200
Isoform_86796_10	chr19	+	1158	1	NIC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	40	-41271	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAGAGAAAAAAA	NA	False	NA	NA	False	GATAAA	-18	NA	29078814	29079972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_29078800_29080000
Isoform_86797_30	chr19	-	1326	2	Antisense	novelGene_ENSMUSG00000024785.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	3	45	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29081808	29080462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_29080911_29080930
Isoform_86798_4	chr19	-	2561	2	Antisense	novelGene_ENSMUSG00000024785.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	45	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29083043	29080462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_29080911_29080930
Isoform_86802_17	chr19	+	339	1	FSM	ENSMUSG00000068466.7	ENSMUST00000084171.7	645	1	-124	430	-124	-430	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAATGAAAACCTACA	NA	False	NA	NA	False	NA	NA	NA	29137393	29137732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_29137400_29137700
Isoform_86804_13	chr19	-	186	1	Intergenic	novelGene_5733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATTTTATATTAAAATCA	NA	False	NA	NA	False	NA	NA	NA	29306239	29306053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_29306100_29306200
Isoform_86805_11	chr19	+	176	1	Intergenic	novelGene_5734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTAAAGAACA	6671	False	NA	NA	False	NA	NA	NA	29318927	29319103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_29318900_29319100
Isoform_86806_4	chr19	-	2893	1	NIC	ENSMUSG00000097855.9	novel	1145	4	NA	NA	-203	-15642	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGAATGTTCCACTTGACC	775	False	NA	NA	False	TATAAA	-19	NA	29499597	29496704	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_29496700_29499600
Isoform_86808_3	chr19	-	360	1	Intergenic	novelGene_5735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	29503211	29502851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_29502900_29503200
Isoform_86814_10	chr3	+	168	1	Intergenic	novelGene_7278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAACCCTCAGCCAAT	NA	False	NA	NA	False	NA	NA	NA	108836225	108836393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_+_108836200_108836400
Isoform_86815_4	chr19	-	173	1	Intergenic	novelGene_5736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29630102	29629929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_29629900_29630100
Isoform_86816_39	chr19	+	163	1	Intergenic	novelGene_5737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATTGCAAAGCACAT	NA	False	NA	NA	False	NA	NA	NA	29651269	29651432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_29651300_29651400
Isoform_86818_67	chr19	-	201	1	Intergenic	novelGene_5738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATTGTGGACCAGCCA	NA	False	NA	NA	False	NA	NA	NA	29655118	29654917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_29654900_29655100
Isoform_86819_6	chr19	-	4871	1	FSM	ENSMUSG00000074909.6	ENSMUST00000099525.5	4575	1	-4	-292	-4	292	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTTGATTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	29790378	29785507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_29785500_29790400
Isoform_86820_36	chr19	-	4566	1	FSM	ENSMUSG00000074909.6	ENSMUST00000099525.5	4575	1	9	0	9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTCCTTCTACTGTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	29790365	29785799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_29785800_29790400
Isoform_86824_9	chr19	+	240	1	Intergenic	novelGene_5739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAACTTGAGAGCAT	NA	False	NA	NA	False	AAAAAG	-41	NA	29922562	29922802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_29922600_29922800
Isoform_86825_55	chr19	+	176	1	Intergenic	novelGene_5864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45918790	45918966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45918800_45919000
Isoform_86827_3	chr19	+	168	1	Intergenic	novelGene_5741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAATTATCCA	NA	False	NA	NA	False	NA	NA	NA	30074089	30074257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_30074100_30074300
Isoform_86831_4	chr19	+	154	1	Intergenic	novelGene_5742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATTAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	30137012	30137166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_30137000_30137200
Isoform_86832_17	chr19	+	180	1	Intergenic	novelGene_5743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGAGTTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	30155998	30156178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_30156000_30156200
Isoform_86833_23	chr19	+	3737	1	FSM	ENSMUSG00000053536.8	ENSMUST00000066039.8	4233	1	17	479	17	-479	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATTTTGTATGTTTCA	NA	False	NA	13	True	AATAAA	-15	NA	31060253	31063990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_31060300_31064000
Isoform_86834_765	chr19	+	3580	1	FSM	ENSMUSG00000053536.8	ENSMUST00000066039.8	4233	1	175	478	175	-478	mono-exon	FALSE	NA	NA	NA	NA	NA	765	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATTTTGTATGTTTCAT	NA	False	NA	14	True	AATAAA	-16	NA	31060411	31063991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_31060400_31064000
Isoform_86853_3	chr19	+	5790	1	Intergenic	novelGene_5744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAAAGCCTT	5752	False	NA	NA	False	TATAAA	-21	NA	31091299	31097089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_31091300_31097100
Isoform_86857_9	chr19	+	5611	1	Intergenic	novelGene_5745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTTGTGTTCTGTT	5790	False	NA	NA	False	NA	NA	NA	31091337	31096948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_31091300_31096900
Isoform_86858_5	chr19	+	5753	1	Intergenic	novelGene_5746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCCTTT	5790	False	NA	NA	False	TATAAA	-22	NA	31091337	31097090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_31091300_31097100
Isoform_86863_3	chr19	-	175	1	Intergenic	novelGene_5747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAGAAAGA	5500	False	NA	NA	False	NA	NA	NA	32097664	32097489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_32097500_32097700
Isoform_86864_4	chr19	+	5922	1	Intergenic	novelGene_5748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32122769	32128691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_32122800_32128700
Isoform_86866_37	chr19	-	164	1	Intergenic	novelGene_5749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAATAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	32197447	32197283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_32197300_32197400
Isoform_86868_3	chr19	-	158	1	Intergenic	novelGene_5585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATCTAAAAAAAAGAA	8665	False	NA	NA	False	NA	NA	NA	4297627	4297469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_4297500_4297600
Isoform_86870_24	chr19	+	221	1	Intergenic	novelGene_5750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAATAAAAATAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	32287112	32287333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_32287100_32287300
Isoform_86871_5	chr19	+	925	1	Genic_Genomic	ENSMUSG00000097787.3	novel	NA	NA	NA	NA	-7	-1057	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTGTCTGCTCCTGT	NA	False	NA	NA	False	AATACA	-16	NA	32366608	32367533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_+_32366600_32367500
Isoform_86873_15	chr5	+	182	1	Intergenic	novelGene_8897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTACGA	7618	False	NA	NA	False	NA	NA	NA	123352549	123352731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_123352500_123352700
Isoform_86883_23	chr19	+	2285	1	FSM	ENSMUSG00000118106.2	ENSMUST00000235511.2	2276	1	-12	3	-12	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATTTTTTATTAGATAT	NA	False	NA	NA	False	AATAAA	-11	NA	32463310	32465595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_32463300_32465600
Isoform_86885_8	chr19	+	164	1	Intergenic	novelGene_5752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	32562443	32562607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_32562400_32562600
Isoform_86888_23	chr19	+	191	1	Intergenic	novelGene_5753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCAATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	32683682	32683873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_32683700_32683900
Isoform_86889_15	chr19	+	177	1	Intergenic	novelGene_5754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	32699517	32699694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_32699500_32699700
Isoform_86891_70	chr17	+	192	1	Intergenic	novelGene_5053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAGAATAGAA	NA	False	NA	NA	False	NA	NA	NA	56224187	56224379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_56224200_56224400
Isoform_86892_3	chr19	-	172	1	Intergenic	novelGene_5586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATATTTTCTCTT	9920	False	NA	NA	False	NA	NA	NA	4323986	4323814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_4323800_4324000
Isoform_86893_17	chr19	+	251	1	Intergenic	novelGene_5756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTTTTTTTATCATAG	3438	False	NA	NA	False	AATACA	-29	NA	32715836	32716087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_32715800_32716100
Isoform_86894_89	chr19	-	178	1	Intergenic	novelGene_5757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAAAGCCTG	9013	False	NA	NA	False	NA	NA	NA	32730767	32730589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_32730600_32730800
Isoform_86895_8	chr19	+	1220	1	NIC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	32	-43997	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAATA	7723	False	NA	NA	False	AATGAA	-2	NA	32735026	32736246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_32735000_32736200
Isoform_86896_19	chr19	-	181	1	Intergenic	novelGene_5758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGTAAAGAAA	6297	False	NA	NA	False	NA	NA	NA	32751079	32750898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_32750900_32751100
Isoform_86898_340	chr19	-	2567	1	Antisense	novelGene_ENSMUSG00000013663.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32800087	32797520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_32797500_32800100
Isoform_86904_4	chr19	+	188	1	Intergenic	novelGene_5759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAGAAAATAACTA	2	False	NA	NA	False	NA	NA	NA	32805449	32805637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_32805400_32805600
Isoform_86907_3	chr19	-	174	1	Intergenic	novelGene_5760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAACAAAAATGACAGTG	NA	False	NA	NA	False	NA	NA	NA	32906509	32906335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_32906300_32906500
Isoform_86909_11	chr19	+	910	1	Antisense	novelGene_ENSMUSG00000071573.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	33369218	33370128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_33369200_33370100
Isoform_86913_4	chr19	-	330	1	Intergenic	novelGene_5761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGTATCTACTACAAA	NA	False	NA	NA	False	NA	NA	NA	34174936	34174606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_34174600_34174900
Isoform_86916_39	chr19	+	177	1	Intergenic	novelGene_5762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATATCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	34760497	34760674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_34760500_34760700
Isoform_86918_16	chr19	+	180	1	Intergenic	novelGene_5763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAAGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	34863973	34864153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_34864000_34864200
Isoform_86921_9	chr19	-	179	1	Intergenic	novelGene_5764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTTTTTCTAAGAA	NA	False	NA	NA	False	NA	NA	NA	34900849	34900670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_34900700_34900800
Isoform_86924_3	chr19	+	165	1	Intergenic	novelGene_5587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	4378509	4378674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_4378500_4378700
Isoform_86925_10	chr19	+	166	1	Intergenic	novelGene_5765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATCTCAAGAGCCTT	NA	False	NA	NA	False	NA	NA	NA	35852459	35852625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_35852500_35852600
Isoform_86928_6	chr19	-	184	1	Intergenic	novelGene_5766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTCAAAAAAAGAGAAAA	8234	False	NA	NA	False	NA	NA	NA	36106065	36105881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_36105900_36106100
Isoform_86929_8	chr19	+	173	1	Intergenic	novelGene_5588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATGAAAC	NA	False	NA	NA	False	NA	NA	NA	4386221	4386394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_4386200_4386400
Isoform_86930_91	chr7	-	177	1	Intergenic	novelGene_10214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTCATT	4159	False	NA	NA	False	NA	NA	NA	99234434	99234257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_99234300_99234400
Isoform_86932_30	chr16	-	205	1	Intergenic	novelGene_4516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATGTAAACATGTGGA	NA	False	NA	NA	False	NA	NA	NA	35811435	35811230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_35811200_35811400
Isoform_86937_5	chr19	-	178	1	Intergenic	novelGene_5767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	36833147	36832969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_36833000_36833100
Isoform_86938_36	chr19	-	176	1	Intergenic	novelGene_5768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36842006	36841830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_36841800_36842000
Isoform_86940_134	chr5	-	177	1	Intergenic	novelGene_8737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAAAT	4605	False	NA	NA	False	NA	NA	NA	108656197	108656020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_108656000_108656200
Isoform_86952_3	chr19	+	204	1	Intergenic	novelGene_5769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTCTATTTCATCTTA	5869	False	NA	NA	False	TTTAAA	-5	NA	36885138	36885342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_36885100_36885300
Isoform_86954_15	chr19	+	179	1	Intergenic	novelGene_5770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGATTCACAG	1401	False	NA	NA	False	NA	NA	NA	36892203	36892382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_36892200_36892400
Isoform_86957_158	chr19	-	178	1	Intergenic	novelGene_5589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	4408534	4408356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_4408400_4408500
Isoform_86958_7	chr19	+	184	1	Intergenic	novelGene_5771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGCAAGCACTTTTATC	4378	False	NA	NA	False	NA	NA	NA	36934408	36934592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_36934400_36934600
Isoform_86959_5	chr19	+	203	1	Intergenic	novelGene_5772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGAAACGTCTAAGTTG	NA	False	NA	NA	False	NA	NA	NA	36954165	36954368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_36954200_36954400
Isoform_86962_11	chr19	-	173	1	Intergenic	novelGene_5590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAATTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	4411160	4410987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_4411000_4411200
Isoform_86965_30	chr19	-	1973	1	FSM	ENSMUSG00002075338.1	ENSMUST00020181851.1	78	1	12	-1907	12	1907	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	1158	False	NA	NA	False	NA	NA	NA	37126550	37124577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_37124600_37126600
Isoform_86967_6	chr19	+	207	1	ISM	ENSMUSG00000097591.2	ENSMUST00000180609.2	1919	3	21298	1193	21298	-1193	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTTATACTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	37172540	37172747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_37172500_37172700
Isoform_86968_13	chr19	-	161	1	Intergenic	novelGene_5773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	37239568	37239407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_37239400_37239600
Isoform_86969_5	chr19	-	245	1	Intergenic	novelGene_5774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTTTTGGGTGGTGA	NA	False	NA	NA	False	NA	NA	NA	37242819	37242574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_37242600_37242800
Isoform_86972_3	chr19	+	178	1	Intergenic	novelGene_5775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATAATCTGATC	NA	False	NA	NA	False	NA	NA	NA	37299542	37299720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_37299500_37299700
Isoform_86977_7	chr19	+	196	1	Intergenic	novelGene_5776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37345472	37345668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_37345500_37345700
Isoform_86978_27	chr19	-	180	1	Intergenic	novelGene_5777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCCCCCAATATG	5857	False	NA	-2	True	NA	NA	NA	37347780	37347600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_37347600_37347800
Isoform_86979_3	chr19	+	170	1	Intergenic	novelGene_5778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATTTTTAAAAAACAAAAAT	NA	False	NA	NA	False	NA	NA	NA	37356252	37356422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_37356300_37356400
Isoform_86983_6	chr19	-	1746	1	FSM	ENSMUSG00000102353.2	ENSMUST00000192635.2	1748	1	13	-11	13	11	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCCATTGAACTCAAGT	NA	False	NA	NA	False	AGTAAA	-13	NA	37423091	37421345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_37421300_37423100
Isoform_86984_22	chr19	+	180	1	Intergenic	novelGene_5779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTCTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	37451366	37451546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_37451400_37451500
Isoform_86986_13	chr19	-	178	1	Intergenic	novelGene_5780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAACTATATG	NA	False	NA	NA	False	NA	NA	NA	37513938	37513760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_37513800_37513900
Isoform_86987_5	chr19	-	204	1	Intergenic	novelGene_5781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAACGTTTGGCTAGAAT	4133	False	NA	NA	False	NA	NA	NA	37557443	37557239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_37557200_37557400
Isoform_86988_22	chr19	+	182	1	Intergenic	novelGene_5782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	37660945	37661127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_37660900_37661100
Isoform_86989_11	chr19	-	219	1	Genic_Genomic	ENSMUSG00000054611.18	novel	NA	NA	NA	NA	8315	26	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCATCATAGACTTTTC	1822	False	NA	NA	False	NA	NA	NA	4438630	4438411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_4438400_4438600
Isoform_86991_14	chr19	+	764	1	NIC	ENSMUSG00000024989.16	novel	859	5	NA	NA	2	-7010	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	38043460	38044224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_38043500_38044200
Isoform_86993_13	chr19	+	172	1	Intergenic	novelGene_5783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTAAAGGCACTT	8304	False	NA	NA	False	NA	NA	NA	38141106	38141278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_38141100_38141300
Isoform_86996_11	chr19	-	1483	1	Intergenic	novelGene_5785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCTGAA	NA	False	NA	NA	False	NA	NA	NA	38314441	38312958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_38313000_38314400
Isoform_86997_3	chr19	+	159	1	Intergenic	novelGene_5786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	38317051	38317210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_38317100_38317200
Isoform_86998_6	chr19	-	150	1	Intergenic	novelGene_5787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACACTTAACTTTAT	3060	False	NA	NA	False	NA	NA	NA	38322932	38322782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_38322800_38322900
Isoform_86999_36	chr19	+	213	1	Intergenic	novelGene_5788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTTTCATAGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	38326714	38326927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_38326700_38326900
Isoform_8700_5	chr10	+	2324	18	FSM	ENSMUSG00000044005.14	ENSMUST00000159440.8	2398	18	5	69	5	1	multi-exon	FALSE	canonical	0	0	junction_3	26.6050181285294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTATAATTTTTATTTT	NA	False	NA	6	True	AATAAA	-12	NA	128030599	128045804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036012_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
Isoform_8701_190	chr10	+	2421	18	FSM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	151	1	-29	-1	multi-exon	FALSE	canonical	3	75	junction_3	13.3766309680488	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATTTTTATTTTATA	NA	False	NA	9	True	AATAAA	-15	NA	128030476	128045807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
Isoform_87010_4	chr19	-	1806	1	Antisense	novelGene_ENSMUSG00000044026.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAACCAAGGAGCCAAAGC	NA	False	NA	NA	False	NA	NA	NA	38394027	38392221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_38392200_38394000
Isoform_87014_11	chr19	-	177	1	Intergenic	novelGene_5790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTTTACTTCA	NA	False	NA	NA	False	NA	NA	NA	38531564	38531387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_38531400_38531600
Isoform_87016_6	chr19	+	177	1	Intergenic	novelGene_5591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGTCAGGCA	NA	False	NA	NA	False	NA	NA	NA	4478418	4478595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_4478400_4478600
Isoform_87017_11	chr19	-	181	1	Intergenic	novelGene_5791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACCA	NA	False	NA	NA	False	NA	NA	NA	38834266	38834085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_38834100_38834300
Isoform_87019_16	chr19	+	173	1	Intergenic	novelGene_5792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	38911640	38911813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_38911600_38911800
Isoform_8703_4	chr10	+	2572	18	FSM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	0	1	0	-1	multi-exon	FALSE	canonical	3	75	junction_3	13.3766309680488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATTTTTATTTTATA	NA	False	NA	9	True	AATAAA	-15	NA	128030325	128045807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
Isoform_87030_4	chr19	-	172	1	Intergenic	novelGene_5793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	38976969	38976797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_38976800_38977000
Isoform_87032_3	chr19	-	186	1	Intergenic	novelGene_5794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGGCTCAGAACTGA	NA	False	NA	NA	False	NA	NA	NA	39507617	39507431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_39507400_39507600
Isoform_87034_8	chr19	+	1204	1	Intergenic	novelGene_5796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACATTTACAAGACTGGA	NA	False	NA	NA	False	NA	NA	NA	40257494	40258698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_40257500_40258700
Isoform_87036_136	chr19	+	177	1	Intergenic	novelGene_5797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTATAAAAAGGATTGG	NA	False	NA	NA	False	NA	NA	NA	40261491	40261668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_40261500_40261700
Isoform_87037_3	chr19	-	231	1	Intergenic	novelGene_5798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTTTTCCAAAAAGTAG	NA	False	NA	NA	False	AAGAAA	-30	NA	40334035	40333804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_40333800_40334000
Isoform_87044_1678	chr19	-	2839	1	FSM	ENSMUSG00000096592.2	ENSMUST00000120920.2	522	1	-697	-1620	-697	1620	mono-exon	FALSE	NA	NA	NA	NA	NA	1678	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	40550199	40547360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_40547400_40550200
Isoform_8705_8	chr10	+	2666	19	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	-29	-1	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_1	27.8856239788777	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATTTTTATTTTATA	NA	False	NA	9	True	AATAAA	-15	NA	128030476	128045807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128030962_128030989_128031050_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
Isoform_87058_112	chr19	+	2777	1	FSM	ENSMUSG00000094388.2	ENSMUST00000159764.2	522	1	-637	-1618	-637	1618	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACATGTATC	NA	False	NA	NA	False	AATAAA	-17	NA	40610266	40613043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_40610300_40613000
Isoform_87065_7	chr19	+	3673	1	FSM	ENSMUSG00000099118.3	ENSMUST00000183735.3	87	1	5	-3591	5	3591	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40883151	40886824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_40883200_40886800
Isoform_87074_48	chr19	-	178	1	Intergenic	novelGene_5799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGTGATCTGTGA	NA	False	NA	NA	False	NA	NA	NA	40913726	40913548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_40913500_40913700
Isoform_87079_26	chr19	-	177	1	Intergenic	novelGene_5801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGGC	NA	False	NA	NA	False	NA	NA	NA	41411759	41411582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_41411600_41411800
Isoform_87080_12	chr19	+	176	1	Intergenic	novelGene_5802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAAAAAGAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	41411933	41412109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_41411900_41412100
Isoform_87083_40	chr19	+	180	1	Intergenic	novelGene_5592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	4572734	4572914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_4572700_4572900
Isoform_87086_3	chr19	+	167	1	Intergenic	novelGene_5803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGATGAGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	41452045	41452212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_41452000_41452200
Isoform_87087_7	chr19	-	176	1	Intergenic	novelGene_5804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATACTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	41454912	41454736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_41454700_41454900
Isoform_87088_3	chr2	+	173	1	Intergenic	novelGene_6274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	4024	False	NA	NA	False	NA	NA	NA	69398518	69398691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_69398500_69398700
Isoform_87091_3	chr19	+	1210	1	Intergenic	novelGene_5806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTTCCTTTTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	41513703	41514913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_41513700_41514900
Isoform_87094_14	chr19	+	806	1	Intergenic	novelGene_5807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	41514593	41515399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_41514600_41515400
Isoform_87096_5	chr19	+	172	1	Intergenic	novelGene_5808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGGTA	NA	False	NA	NA	False	NA	NA	NA	41521092	41521264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_41521100_41521300
Isoform_87098_3	chr19	-	5022	1	Intergenic	novelGene_5809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCCAGCAAGGAATCCCA	NA	False	NA	NA	False	NA	NA	NA	41583006	41577984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_41578000_41583000
Isoform_8710_409	chr10	+	4431	29	FSM	ENSMUSG00000039994.16	ENSMUST00000055539.11	4457	29	17	9	2	0	multi-exon	FALSE	canonical	3	249	junction_23	47.0561431934758	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6608	False	NA	11	True	AATAAA	-41	NA	128067950	128088801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
Isoform_87107_9	chr19	-	176	1	Intergenic	novelGene_5810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAACCAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	41620869	41620693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_41620700_41620900
Isoform_8712_234	chr10	+	4429	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105244.8	4341	29	-7	-81	2	1	multi-exon	FALSE	canonical	3	180	junction_28	54.1443059549842	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGACTTTTGTTGT	6608	False	NA	12	True	AATAAA	-42	NA	128067950	128088802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
Isoform_87121_3	chr19	+	2576	1	FSM	ENSMUSG00000067199.5	ENSMUST00000087155.5	2614	1	35	3	35	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCGGCTTTTATTTTGT	NA	False	NA	NA	False	AATAAA	-31	NA	41818443	41821019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_41818400_41821000
Isoform_87122_82	chr19	-	2124	1	FSM	ENSMUSG00000047604.4	ENSMUST00000059231.4	2161	1	32	5	32	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGGTCTTTGTTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	41836539	41834415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_41834400_41836500
Isoform_87123_10	chr19	-	3853	1	FSM	ENSMUSG00000098346.3	ENSMUST00000184483.3	58	1	-1682	-2113	-1682	2113	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAGAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	4675665	4671812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_4671800_4675700
Isoform_87126_3	chr19	-	205	1	Intergenic	novelGene_5811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTATGTATAT	9554	False	NA	NA	False	NA	NA	NA	41891253	41891048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_41891000_41891300
Isoform_87127_4	chr19	-	189	1	Intergenic	novelGene_5812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCCACAGGGAGCCTA	3079	False	NA	NA	False	NA	NA	NA	41897728	41897539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_41897500_41897700
Isoform_87136_7	chr19	-	1595	1	NIC	ENSMUSG00000034321.15	novel	2296	6	NA	NA	-4	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	41921741	41920146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_41920100_41921700
Isoform_87138_27	chr19	-	186	1	Intergenic	novelGene_5813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGTCAAA	5512	False	NA	NA	False	NA	NA	NA	41927785	41927599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_41927600_41927800
Isoform_87139_11	chr19	+	174	1	Intergenic	novelGene_5814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCTGG	5049	False	NA	NA	False	NA	NA	NA	41986841	41987015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_41986800_41987000
Isoform_87140_9	chr19	+	177	1	Intergenic	novelGene_5815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAGAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	42003866	42004043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_42003900_42004000
Isoform_87142_3	chr19	-	180	1	Intergenic	novelGene_5816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGAAAGA	8619	False	NA	NA	False	NA	NA	NA	42050837	42050657	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_42050700_42050800
Isoform_87143_47	chr19	+	178	1	Intergenic	novelGene_5817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTGGTGAGA	1577	False	NA	NA	False	NA	NA	NA	42070289	42070467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_42070300_42070500
Isoform_8715_138	chr10	+	4428	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105242.8	4385	29	-52	9	2	0	multi-exon	FALSE	canonical	3	88	junction_23	64.9742001387741	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6608	False	NA	11	True	AATAAA	-41	NA	128067950	128088801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
Isoform_87152_44	chr19	-	150	1	Intergenic	novelGene_5818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACTAAAAA	9780	False	NA	NA	False	NA	NA	NA	42126210	42126060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_42126100_42126200
Isoform_87154_7	chr19	-	176	1	Intergenic	novelGene_5819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAATGTATAAAAAAAA	5567	False	NA	NA	False	NA	NA	NA	42130423	42130247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_42130200_42130400
Isoform_87155_11	chr19	+	4296	1	FSM	ENSMUSG00000044345.10	ENSMUST00000184186.2	3755	1	-305	-236	3	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTGGGTCTCACG	NA	False	NA	24	True	AATAAA	-16	NA	42135841	42140137	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_42135800_42140100
Isoform_87156_7	chr19	+	181	1	Intergenic	novelGene_5820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGCTCATTCGA	NA	False	NA	NA	False	NA	NA	NA	42145671	42145852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_42145700_42145900
Isoform_87157_48	chr19	+	195	1	Intergenic	novelGene_5821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	3527	False	NA	NA	False	NA	NA	NA	42150995	42151190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_42151000_42151200
Isoform_87161_10	chr19	-	1544	1	Antisense	novelGene_ENSMUSG00000018820.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42182345	42180801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_42180800_42182300
Isoform_87163_60	chr19	+	176	1	Intergenic	novelGene_5823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCGGAACAAGCAGGGAC	8564	False	NA	NA	False	NA	NA	NA	42277254	42277430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_42277300_42277400
Isoform_87165_7	chr19	+	343	1	Intergenic	novelGene_5822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAAAAAATCTTAAA	8563	False	NA	NA	False	NA	NA	NA	42277253	42277596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_42277300_42277600
Isoform_87167_4	chr19	-	479	1	FSM	ENSMUSG00000117706.2	ENSMUST00000237236.2	111	1	15	-383	15	383	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGCCCCGAAAAAAAAAAAAG	NA	False	NA	-20	True	AATAAA	-19	NA	42367525	42367046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_42367000_42367500
Isoform_87168_48	chr19	+	173	1	Intergenic	novelGene_5824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	42390431	42390604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_42390400_42390600
Isoform_87172_6	chr19	-	158	1	Intergenic	novelGene_5825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43448074	43447916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_43447900_43448100
Isoform_87176_463	chr19	-	178	1	Intergenic	novelGene_5826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	43566956	43566778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_43566800_43567000
Isoform_87177_13	chr19	-	175	1	Intergenic	novelGene_5827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43622563	43622388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_43622400_43622600
Isoform_87179_100	chr11	-	176	1	Intergenic	novelGene_1546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	53737702	53737526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_53737500_53737700
Isoform_8718_76	chr10	+	4426	29	NIC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	88	junction_23	70.0407315897875	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGACTTTTGTTGT	6608	False	NA	12	True	AATAAA	-42	NA	128067950	128088802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
Isoform_87180_30	chr19	+	2099	1	Antisense	novelGene_ENSMUSG00000040018.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43726879	43728978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_43726900_43729000
Isoform_87181_9	chr19	+	180	1	Intergenic	novelGene_5829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAGTTATACAT	NA	False	NA	NA	False	NA	NA	NA	43742904	43743084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_43742900_43743100
Isoform_87182_17	chr19	+	177	1	Intergenic	novelGene_5830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAGCAAAAATA	NA	False	NA	NA	False	NA	NA	NA	43883763	43883940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_43883800_43883900
Isoform_87183_179	chr19	-	176	1	Intergenic	novelGene_5831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAGAGTATAG	NA	False	NA	NA	False	NA	NA	NA	43895662	43895486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_43895500_43895700
Isoform_87184_17	chr19	+	174	1	Intergenic	novelGene_5832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTGG	NA	False	NA	NA	False	NA	NA	NA	43932303	43932477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_43932300_43932500
Isoform_87185_8	chr19	-	177	1	Intergenic	novelGene_5833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	43940452	43940275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_43940300_43940500
Isoform_87191_34	chr19	-	247	1	FSM	ENSMUSG00000077391.3	ENSMUST00000104203.3	146	1	3	-104	3	104	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTCATCAAGACTTCAA	4909	False	NA	-5	True	NA	NA	NA	44102560	44102313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_44102300_44102600
Isoform_87194_28	chr19	-	184	1	Intergenic	novelGene_5834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAGCTAGAAACAGAT	NA	False	NA	NA	False	NA	NA	NA	44200109	44199925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_44199900_44200100
Isoform_87195_31	chr19	-	153	1	Intergenic	novelGene_5835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATAAATAAATAAATCT	3239	False	NA	NA	False	NA	NA	NA	44228441	44228288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_44228300_44228400
Isoform_87237_3	chr19	+	1972	1	Intergenic	novelGene_5593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCCCTTA	NA	False	NA	NA	False	AAAAAG	-22	NA	4822128	4824100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_4822100_4824100
Isoform_87239_24	chr19	-	177	1	Intergenic	novelGene_5836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCCATTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	44357673	44357496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_44357500_44357700
Isoform_87240_15	chr19	-	180	1	Intergenic	novelGene_5837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTAAAGTACTAGT	NA	False	NA	NA	False	NA	NA	NA	44365722	44365542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_44365500_44365700
Isoform_87241_5	chr19	-	171	1	Intergenic	novelGene_5838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTAAAAATAAAGTGCTT	2520	False	NA	NA	False	NA	NA	NA	44375680	44375509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_44375500_44375700
Isoform_8725_29	chr10	+	4429	29	NIC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	73.5504824551665	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTTTGTTGTCTTCC	6608	False	NA	17	True	AATAAA	-17	NA	128067950	128088807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128068045_128075710_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
Isoform_87273_69	chr19	+	168	1	Intergenic	novelGene_5839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTTAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	44530208	44530376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_44530200_44530400
Isoform_87274_4	chr19	-	694	1	NIC	ENSMUSG00000051984.14	novel	3939	26	NA	NA	3	-27524	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44534300	44533606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_44533600_44534300
Isoform_87283_17	chr19	+	176	1	Intergenic	novelGene_5840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	44631628	44631804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_44631600_44631800
Isoform_87285_5	chr10	-	175	1	Intergenic	novelGene_1005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	76289807	76289632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_76289600_76289800
Isoform_87292_5	chr19	-	174	1	Intergenic	novelGene_5841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	45011783	45011609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45011600_45011800
Isoform_87294_38	chr19	-	217	1	Intergenic	novelGene_5842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAACCTTGTTTCTTCA	6712	False	NA	NA	False	NA	NA	NA	45051608	45051391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45051400_45051600
Isoform_87295_9	chr19	+	156	1	Intergenic	novelGene_5843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTAATGCTGTTTTC	675	False	NA	NA	False	NA	NA	NA	45056394	45056550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45056400_45056600
Isoform_87297_11	chr19	-	180	1	Intergenic	novelGene_5844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGTGCTTAGTCCAA	NA	False	NA	NA	False	NA	NA	NA	45126290	45126110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45126100_45126300
Isoform_87298_5	chr19	-	182	1	Intergenic	novelGene_5845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGGGGGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	45185157	45184975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45185000_45185200
Isoform_87299_9	chr19	+	164	1	Intergenic	novelGene_5846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAGAAAAAAAA	8265	False	NA	NA	False	NA	NA	NA	45243872	45244036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45243900_45244000
Isoform_87300_7	chr19	+	176	1	Intergenic	novelGene_5848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATGAAAAT	NA	False	NA	NA	False	NA	NA	NA	45248411	45248587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45248400_45248600
Isoform_87301_56	chr19	+	173	1	Intergenic	novelGene_5849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	45261940	45262113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45261900_45262100
Isoform_87302_51	chr19	-	177	1	Intergenic	novelGene_5655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	8678607	8678430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_8678400_8678600
Isoform_87307_5	chr19	+	230	1	Intergenic	novelGene_5851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCAAGGCGGCCTGGT	NA	False	NA	NA	False	AAGAAA	-23	NA	45348576	45348806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45348600_45348800
Isoform_87308_9	chr19	-	165	1	Intergenic	novelGene_5852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTAAACTTGG	NA	False	NA	NA	False	NA	NA	NA	45359265	45359100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45359100_45359300
Isoform_87312_89	chr19	+	179	1	Intergenic	novelGene_5854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATATTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	45384786	45384965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45384800_45385000
Isoform_87315_18	chr19	+	174	1	Intergenic	novelGene_5855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTGACTATAGACAA	NA	False	NA	NA	False	NA	NA	NA	45455997	45456171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45456000_45456200
Isoform_87321_4	chr19	-	174	1	Intergenic	novelGene_5857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAGAATTATTCT	NA	False	NA	NA	False	NA	NA	NA	45631755	45631581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45631600_45631800
Isoform_87324_3	chr19	+	222	1	Intergenic	novelGene_5858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGCCACCTCCAAATC	NA	False	NA	NA	False	NA	NA	NA	45709831	45710053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45709800_45710100
Isoform_87337_42	chr19	-	174	1	Intergenic	novelGene_5859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGGGA	110	False	NA	NA	False	NA	NA	NA	45783935	45783761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45783800_45783900
Isoform_87338_143	chr19	-	236	1	Intergenic	novelGene_5860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45799312	45799076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45799100_45799300
Isoform_87341_23	chr19	-	178	1	Intergenic	novelGene_5861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45841267	45841089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45841100_45841300
Isoform_87342_8	chr19	+	177	1	Intergenic	novelGene_5862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTGA	NA	False	NA	NA	False	NA	NA	NA	45855046	45855223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45855000_45855200
Isoform_87343_13	chr19	-	206	1	Intergenic	novelGene_5863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTGGATATGTTGGT	NA	False	NA	NA	False	NA	NA	NA	45883790	45883584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45883600_45883800
Isoform_87344_151	chr19	-	176	1	Intergenic	novelGene_5740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTCCTG	NA	False	NA	NA	False	NA	NA	NA	29934197	29934021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_29934000_29934200
Isoform_87345_13	chr19	-	171	1	Intergenic	novelGene_5865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45924310	45924139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_45924100_45924300
Isoform_87347_8	chr19	+	171	2	Antisense	novelGene_ENSMUSG00000039901.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGGTCGTTTTTATC	NA	False	NA	NA	False	NA	NA	NA	45975220	45975411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_45975354_45975373
Isoform_87348_4	chr19	-	1317	1	Genic_Genomic	ENSMUSG00000039901.11	novel	NA	NA	NA	NA	-3	-75902	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACTAAAACCAAAACCC	6644	False	NA	NA	False	NA	NA	NA	45986930	45985613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_45985600_45986900
Isoform_87350_128	chr19	+	2674	1	FSM	ENSMUSG00000074811.4	ENSMUST00000099393.4	2666	1	-27	19	-27	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACTCACAGAGGTTTC	NA	False	NA	6	True	AATACA	-12	NA	45991919	45994593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45991900_45994600
Isoform_87351_196	chr19	+	2642	1	FSM	ENSMUSG00000074811.4	ENSMUST00000099393.4	2666	1	5	19	5	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACTCACAGAGGTTTC	NA	False	NA	6	True	AATACA	-12	NA	45991951	45994593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_45992000_45994600
Isoform_87354_5	chr19	+	165	1	Intergenic	novelGene_5866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	45998123	45998288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_45998100_45998300
Isoform_87355_148	chr8	+	176	1	Intergenic	novelGene_10916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	5905	False	NA	NA	False	NA	NA	NA	110528290	110528466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_110528300_110528500
Isoform_87356_15	chr19	+	176	1	Intergenic	novelGene_5867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAAAGACTT	4938	False	NA	NA	False	NA	NA	NA	46008445	46008621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_46008400_46008600
Isoform_87357_17	chr19	-	169	1	Intergenic	novelGene_5868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	46012892	46012723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46012700_46012900
Isoform_87359_7	chr19	+	173	1	Intergenic	novelGene_5594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAAGAAATAT	NA	False	NA	NA	False	NA	NA	NA	4898969	4899142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_4899000_4899100
Isoform_87368_4	chr19	+	172	1	Intergenic	novelGene_5869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAGGAAACC	3415	False	NA	NA	False	NA	NA	NA	46079424	46079596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_46079400_46079600
Isoform_87370_13	chr19	-	157	1	Intergenic	novelGene_5595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	2743	False	NA	NA	False	NA	NA	NA	4903872	4903715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_4903700_4903900
Isoform_87371_6	chr19	+	172	1	Intergenic	novelGene_5870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAATTTGTGTGTGTGTGT	9511	False	NA	NA	False	NA	NA	NA	46118448	46118620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_46118400_46118600
Isoform_87372_4	chr19	+	2036	1	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	0	-17951	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAGTTAAAAGTAAGAGT	9072	False	NA	NA	False	NA	NA	NA	46140968	46143004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_46141000_46143000
Isoform_87373_4	chr19	-	1055	1	Intergenic	novelGene_5871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACTAA	NA	False	NA	NA	False	NA	NA	NA	46156934	46155879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46155900_46156900
Isoform_87374_49	chr19	+	176	1	Intergenic	novelGene_5872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAAGGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	46209288	46209464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_46209300_46209500
Isoform_87375_21	chr16	+	176	2	Intergenic	novelGene_4357	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGCCATTAACCA	NA	False	NA	NA	False	NA	NA	NA	18078583	18330059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_+_18078708_18330007
Isoform_87377_15	chr19	+	159	1	Intergenic	novelGene_5874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAGAAAACA	9269	False	NA	NA	False	NA	NA	NA	46277115	46277274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_46277100_46277300
Isoform_87379_4	chr19	-	2039	1	Genic_Genomic	ENSMUSG00000118087.2	novel	NA	NA	NA	NA	-18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGAAAATGACATTTCG	NA	False	NA	NA	False	AATAAA	-17	NA	46294068	46292029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_46292000_46294100
Isoform_8738_77	chr10	+	4412	24	FSM	ENSMUSG00000040033.17	ENSMUST00000085708.3	4394	24	-19	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_14	16.4593788801125	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGATACTGTGAGAGTGT	2359	False	NA	NA	False	AATAAA	-19	NA	128106425	128128717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117578_128117970_128117989_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
Isoform_87388_10	chr19	-	1149	1	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9687	False	NA	NA	False	AATAGA	-28	NA	46491255	46490106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_46490100_46491300
Isoform_87389_3	chr19	-	1227	1	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	9607	False	NA	NA	False	AATAGA	-26	NA	46491335	46490108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_46490100_46491300
Isoform_8739_4	chr10	+	4384	23	NIC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-2	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	21.2602916254693	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2359	False	NA	NA	False	AATAAA	-9	NA	128106425	128128707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117578_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
Isoform_87402_5	chr7	-	177	1	Intergenic	novelGene_9946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	29612407	29612230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29612200_29612400
Isoform_87403_23	chr19	-	177	1	Intergenic	novelGene_5875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46527676	46527499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46527500_46527700
Isoform_87404_53	chr19	-	177	1	Intergenic	novelGene_5876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46527920	46527743	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46527700_46527900
Isoform_87405_29	chr19	+	158	1	Intergenic	novelGene_5877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTCTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46534428	46534586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_46534400_46534600
Isoform_87406_4	chr19	-	174	1	Intergenic	novelGene_5878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAAAATATG	NA	False	NA	NA	False	NA	NA	NA	46544430	46544256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46544300_46544400
Isoform_87418_10	chr19	-	179	1	Intergenic	novelGene_5880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACCTTGTAAAACC	NA	False	NA	NA	False	NA	NA	NA	46712101	46711922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46711900_46712100
Isoform_8742_19	chr10	+	3418	2	FSM	ENSMUSG00000005682.10	ENSMUST00000219801.2	3410	2	-30	22	11	-22	multi-exon	FALSE	canonical	3	271	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAGACCAAGAA	NA	False	NA	NA	False	NA	NA	NA	128139214	128143255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128139341_128139963
Isoform_87420_5	chr19	-	176	1	Intergenic	novelGene_5881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTCCTCCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	46737657	46737481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46737500_46737700
Isoform_87421_61	chr19	-	175	1	Intergenic	novelGene_5882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAAGGCTA	NA	False	NA	NA	False	NA	NA	NA	46744550	46744375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46744400_46744600
Isoform_87422_5	chr19	-	171	1	Intergenic	novelGene_5883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	46762415	46762244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46762200_46762400
Isoform_87423_106	chr19	-	167	1	Intergenic	novelGene_5884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	46774839	46774672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46774700_46774800
Isoform_87424_42	chr19	+	179	1	Intergenic	novelGene_5885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTTAAGATCATCCT	NA	False	NA	NA	False	NA	NA	NA	46829883	46830062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_46829900_46830100
Isoform_87427_3	chr19	+	158	1	Intergenic	novelGene_5886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	46927744	46927902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_46927700_46927900
Isoform_87430_76	chr19	-	176	1	Intergenic	novelGene_5887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46989268	46989092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_46989100_46989300
Isoform_87435_303	chr19	-	164	1	Intergenic	novelGene_5888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTAAAAAAAAAAAAGT	1805	False	NA	NA	False	NA	NA	NA	47049064	47048900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_47048900_47049100
Isoform_87436_17	chr19	+	175	1	Intergenic	novelGene_5889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47053470	47053645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_47053500_47053600
Isoform_87439_591	chr19	-	177	1	Intergenic	novelGene_5626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	591	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	6484736	6484559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_6484600_6484700
Isoform_8744_5	chr10	+	4308	26	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	63.5704333790482	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGCTAGTGTGGGATTC	NA	False	NA	12	True	AATAAA	-21	NA	128139233	128157219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
Isoform_87440_49	chr19	-	184	1	Intergenic	novelGene_5890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATTACTGAAGA	NA	False	NA	NA	False	NA	NA	NA	47222502	47222318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_47222300_47222500
Isoform_87441_17	chr19	+	3260	1	NIC	ENSMUSG00000006435.17	novel	4158	6	NA	NA	11427	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACCAAAAAA	NA	False	NA	NA	False	GATAAA	-35	NA	47228776	47232036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_47228800_47232000
Isoform_87444_4	chr19	-	2548	1	NIC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	3	1346	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47525555	47523007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_47523000_47525600
Isoform_87446_20	chr19	+	176	1	Intergenic	novelGene_5904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTCACC	NA	False	NA	NA	False	NA	NA	NA	53571973	53572149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53572000_53572100
Isoform_87447_13	chr19	-	197	1	Intergenic	novelGene_5891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	47595269	47595072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_47595100_47595300
Isoform_87448_4	chr19	-	2434	1	Genic_Genomic	ENSMUSG00000086121.2	novel	NA	NA	NA	NA	-953	-9482	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTTCTTTTAAATTAG	NA	False	NA	NA	False	NA	NA	NA	47606498	47604064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_47604100_47606500
Isoform_8745_21	chr10	+	4289	26	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	56.8384939983459	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAACCGCTAGTGTGG	NA	False	NA	7	True	AATAAA	-16	NA	128139220	128157214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
Isoform_87455_39	chr19	-	182	1	Intergenic	novelGene_5597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATATATGTATATACC	6568	False	NA	NA	False	NA	NA	NA	5017384	5017202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5017200_5017400
Isoform_87456_12	chr19	+	174	1	Intergenic	novelGene_5892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGTAAGTTAATCA	NA	False	NA	NA	False	NA	NA	NA	47716590	47716764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_47716600_47716800
Isoform_87459_14	chr19	-	168	1	Intergenic	novelGene_5893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAAAAGATT	2686	False	NA	NA	False	NA	NA	NA	47862269	47862101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_47862100_47862300
Isoform_87461_33	chr19	-	180	1	Intergenic	novelGene_5894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTCATTTGGTT	6562	False	NA	NA	False	NA	NA	NA	47912725	47912545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_47912500_47912700
Isoform_87463_111	chr6	-	197	1	Intergenic	novelGene_9377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAATC	NA	False	NA	NA	False	NA	NA	NA	53660051	53659854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_53659900_53660100
Isoform_87466_7	chr19	+	151	1	Intergenic	novelGene_5896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATATAATAATAAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	53025021	53025172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53025000_53025200
Isoform_87468_41	chr19	-	203	1	Intergenic	novelGene_5897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGTGGTAAAAAAATCTC	2355	False	NA	NA	False	NA	NA	NA	53036886	53036683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_53036700_53036900
Isoform_8747_6	chr10	+	4300	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_2	68.0929482398875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139216	128157218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
Isoform_87470_304	chr19	+	167	1	Intergenic	novelGene_5898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTGTGATGT	6328	False	NA	NA	False	NA	NA	NA	53057744	53057911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53057700_53057900
Isoform_87471_7	chr19	+	185	1	Intergenic	novelGene_5899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAATATCA	3606	False	NA	NA	False	NA	NA	NA	53088711	53088896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53088700_53088900
Isoform_87472_4	chr19	+	175	1	Intergenic	novelGene_5598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAGTGGAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	5065060	5065235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_5065100_5065200
Isoform_87476_6	chr19	-	1791	1	Intergenic	novelGene_5900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	5525	False	NA	NA	False	NA	NA	NA	53385080	53383289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_53383300_53385100
Isoform_87478_57	chr19	-	176	1	Intergenic	novelGene_5901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAAACAAACG	NA	False	NA	NA	False	NA	NA	NA	53402118	53401942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_53401900_53402100
Isoform_87479_3	chr19	+	2089	1	Genic_Genomic	ENSMUSG00000097779.3	novel	NA	NA	NA	NA	21	8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGACTCAGCTCTGTTT	NA	False	NA	NA	False	AATAAA	-39	NA	53449073	53451162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_+_53449100_53451200
Isoform_8748_55	chr10	+	4438	26	FSM	ENSMUSG00000005682.10	ENSMUST00000005825.8	4445	26	3	4	3	2	multi-exon	FALSE	canonical	2	78	junction_17	49.8603810655314	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139206	128157218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
Isoform_87480_6	chr19	-	176	1	Intergenic	novelGene_5902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAACC	NA	False	NA	NA	False	NA	NA	NA	53510315	53510139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_53510100_53510300
Isoform_87481_3	chr19	-	2592	1	Antisense	novelGene_ENSMUSG00000024891.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAACAAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	5074348	5071756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_5071800_5074300
Isoform_87483_3	chr19	-	174	1	Intergenic	novelGene_5903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53545165	53544991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_53545000_53545200
Isoform_87484_28	chr5	-	176	1	Genic_Genomic	ENSMUSG00000043036.15	novel	NA	NA	NA	NA	262	59	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATTTTTTTAAAAAA	NA	False	NA	-9	True	NA	NA	NA	122272616	122272440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr5_-_122272400_122272600
Isoform_87488_565	chr19	-	904	1	FSM	ENSMUSG00000071497.5	ENSMUST00000095978.5	901	1	8	-11	8	11	mono-exon	FALSE	NA	NA	NA	NA	NA	565	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	53577491	53576587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_53576600_53577500
Isoform_8749_190	chr10	+	4400	26	FSM	ENSMUSG00000005682.10	ENSMUST00000218315.2	4379	26	-26	5	13	1	multi-exon	FALSE	canonical	2	164	junction_12	40.3480061465248	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCGCTAGTGTGGGAT	NA	False	NA	10	True	AATAAA	-19	NA	128139216	128157217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
Isoform_87490_10	chr19	-	269	1	Intergenic	novelGene_5905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACAGATTTGCAGTGG	1842	False	NA	NA	False	NA	NA	NA	53598167	53597898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_53597900_53598200
Isoform_87492_23	chr19	+	174	1	Intergenic	novelGene_5906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAGAGAATAAT	1905	False	NA	NA	False	NA	NA	NA	53625072	53625246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53625100_53625200
Isoform_87495_19	chr19	+	164	1	Intergenic	novelGene_5907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAAAGAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	53656580	53656744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53656600_53656700
Isoform_87496_3	chr19	+	193	1	Intergenic	novelGene_5908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTGTATTATATCCCA	3036	False	NA	NA	False	NA	NA	NA	53680446	53680639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53680400_53680600
Isoform_87497_9	chr19	+	175	1	Intergenic	novelGene_5909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTGAGCAAGTGGGGT	NA	False	NA	NA	False	NA	NA	NA	53690726	53690901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53690700_53690900
Isoform_87498_3	chr19	+	238	1	Intergenic	novelGene_5910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAACAAAACTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	53690729	53690967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_53690700_53691000
Isoform_87500_146	chr16	-	177	1	Intergenic	novelGene_4441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29584021	29583844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_29583800_29584000
Isoform_87501_128	chr19	-	175	1	Intergenic	novelGene_5912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTGATTAATCAAT	78	False	NA	NA	False	NA	NA	NA	53791765	53791590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_53791600_53791800
Isoform_87502_22	chrX	-	177	1	Intergenic	novelGene_11924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	4957	False	NA	NA	False	NA	NA	NA	37656737	37656560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_37656600_37656700
Isoform_87503_6	chr19	+	2274	1	FSM	ENSMUSG00000047379.8	ENSMUST00000235776.2	2224	1	-47	-3	34	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTCTGTTACTCTCCT	236	False	NA	11	True	AATAAA	-18	NA	5088887	5091161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5088900_5091200
Isoform_87504_3	chr19	-	768	1	Intergenic	novelGene_5913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53983307	53982539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_53982500_53983300
Isoform_87506_5	chr19	+	194	1	Intergenic	novelGene_5914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGGTTTGTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55344450	55344644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_55344400_55344600
Isoform_87507_14	chr19	-	174	1	Intergenic	novelGene_5915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAAGAAACAGATAA	NA	False	NA	NA	False	NA	NA	NA	55545933	55545759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_55545800_55545900
Isoform_87509_8	chr19	-	175	1	Intergenic	novelGene_5916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAAAAAGGGTTTG	1523	False	NA	NA	False	NA	NA	NA	56388512	56388337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_56388300_56388500
Isoform_87512_3	chr19	-	2733	1	Antisense	novelGene_ENSMUSG00000025078.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	56586979	56584246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_56584200_56587000
Isoform_87513_12	chr19	-	2546	2	Antisense	novelGene_ENSMUSG00000025078.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	1	55	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTCAAGC	NA	False	NA	NA	False	NA	NA	NA	56591327	56588756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_56589139_56589163
Isoform_87514_3	chr19	+	173	1	Intergenic	novelGene_5917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	56682735	56682908	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_56682700_56682900
Isoform_87515_4	chr19	+	2622	1	FSM	ENSMUSG00000035283.6	ENSMUST00000038949.6	2952	1	-118	448	-118	-448	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	7028	False	NA	NA	False	AAAACA	-10	NA	56710512	56713134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_56710500_56713100
Isoform_87516_10	chr19	+	215	1	Intergenic	novelGene_5918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTCTTAAACCATTTA	NA	False	NA	NA	False	NA	NA	NA	56743092	56743307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_56743100_56743300
Isoform_8752_18	chr10	+	4442	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_12	62.5445249402376	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139205	128157218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
Isoform_87521_3	chr19	+	177	1	Intergenic	novelGene_5919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATACCAG	NA	False	NA	NA	False	NA	NA	NA	57131425	57131602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_57131400_57131600
Isoform_87522_4	chr19	+	2534	1	FSM	ENSMUSG00000056481.8	ENSMUST00000070630.8	2605	1	33	38	33	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCCCCACTGATGCCTG	6811	False	NA	NA	False	AATAAA	-27	NA	5118138	5120672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5118100_5120700
Isoform_87528_216	chr19	-	178	1	Intergenic	novelGene_5920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTAGT	NA	False	NA	NA	False	NA	NA	NA	57438001	57437823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_57437800_57438000
Isoform_8753_42	chr10	+	4406	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_12	55.6509694434877	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139214	128157218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
Isoform_87530_5	chr19	-	169	1	Intergenic	novelGene_5921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	57566520	57566351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_57566400_57566500
Isoform_87534_19	chr19	-	659	1	Intergenic	novelGene_5923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCCAAAAG	NA	False	NA	NA	False	CATAAA	-13	NA	57656533	57655874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_57655900_57656500
Isoform_87535_19	chr19	-	526	1	Intergenic	novelGene_5922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCCAAAAG	NA	False	NA	NA	False	CATAAA	-13	NA	57656400	57655874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_57655900_57656400
Isoform_87537_10	chr19	-	184	1	Intergenic	novelGene_5924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATAGAGAGACAGAGA	NA	False	NA	NA	False	NA	NA	NA	57718286	57718102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_57718100_57718300
Isoform_87538_8	chr19	+	170	1	Intergenic	novelGene_5925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTTATTAATTTTAT	NA	False	NA	1	True	NA	NA	NA	58057957	58058127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_58058000_58058100
Isoform_87539_11	chr19	+	172	1	Intergenic	novelGene_5599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	5127561	5127733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_5127600_5127700
Isoform_87541_7	chr19	+	1342	1	Intergenic	novelGene_5926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGCAAGGCCGACAA	NA	False	NA	NA	False	NA	NA	NA	58794651	58795993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_58794700_58796000
Isoform_87542_22	chr19	-	196	1	Intergenic	novelGene_5927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTCCCAGACCAAAATG	NA	False	NA	NA	False	NA	NA	NA	59194739	59194543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_59194500_59194700
Isoform_87548_151	chr19	+	497	1	FSM	ENSMUSG00000067038.7	ENSMUST00000086764.7	396	1	-83	-18	-83	18	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGCC	NA	False	NA	NA	False	AATAAA	-15	NA	59310719	59311216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_59310700_59311200
Isoform_8756_7	chr10	+	4366	26	FSM	ENSMUSG00000005682.10	ENSMUST00000219721.2	4316	26	-48	-2	-6	2	multi-exon	FALSE	canonical	2	23	junction_2	56.9842083388021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139197	128157218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128139341_128139963_128140363_128143987_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
Isoform_87569_6	chr19	+	177	1	Intergenic	novelGene_5928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGAAACCTGGGC	NA	False	NA	NA	False	NA	NA	NA	60581083	60581260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_60581100_60581300
Isoform_87576_3	chr19	+	3978	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	-53	3	-53	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAGAAATGTGTTTTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	60744371	60748349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_60744400_60748300
Isoform_87577_7	chr19	+	3313	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	88	527	88	-527	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGTTTTTCTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	60744512	60747825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_60744500_60747800
Isoform_87591_8	chr19	-	2701	1	NIC	ENSMUSG00000024862.17	novel	2838	16	NA	NA	0	-1787	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5168325	5165624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_5165600_5168300
Isoform_87592_18	chr19	+	176	1	Intergenic	novelGene_5929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	60856373	60856549	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_60856400_60856500
Isoform_87593_15	chr19	-	202	1	Intergenic	novelGene_5930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGCAAGTACAGG	9962	False	NA	NA	False	NA	NA	NA	60864604	60864402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_60864400_60864600
Isoform_87594_4	chr19	-	198	1	Intergenic	novelGene_5931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGGAATAGATACACATT	NA	False	NA	NA	False	NA	NA	NA	61092678	61092480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_61092500_61092700
Isoform_8760_32	chr10	+	820	6	FSM	ENSMUSG00000025381.4	ENSMUST00000026446.4	763	6	-62	5	-53	-5	multi-exon	FALSE	canonical	3	76	junction_1	1015.96602305392	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158274	128163051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128158400_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_87603_11	chr19	+	157	1	Intergenic	novelGene_5600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGGT	9384	False	NA	NA	False	NA	NA	NA	5296286	5296443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_5296300_5296400
Isoform_87605_3	chr19	-	200	1	Intergenic	novelGene_5601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	941	False	NA	NA	False	NA	NA	NA	5306577	5306377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5306400_5306600
Isoform_87608_43	chr19	-	1658	1	Genic_Genomic	ENSMUSG00000118263.2	novel	NA	NA	NA	NA	-119	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTTCTTTACTCTTTA	9081	False	NA	-3	True	NA	NA	NA	5357563	5355905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_5355900_5357600
Isoform_87610_172	chr9	-	177	1	Intergenic	novelGene_11695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109983354	109983177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_109983200_109983400
Isoform_87617_3	chr19	+	535	1	FSM	ENSMUSG00000117959.2	ENSMUST00000237256.2	1266	1	484	247	484	-247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTTGTTTCTAGTTT	NA	False	NA	NA	False	TATAAA	-16	NA	5438847	5439382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5438800_5439400
Isoform_87618_36	chr19	-	180	1	Intergenic	novelGene_5602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACAATTGGG	9630	False	NA	NA	False	NA	NA	NA	5447908	5447728	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5447700_5447900
Isoform_87619_1199	chr19	+	174	1	Intergenic	novelGene_5603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATATAATAAATAT	1095	False	NA	NA	False	NA	NA	NA	5451352	5451526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_5451400_5451500
Isoform_8762_17	chr10	+	890	6	NIC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	1028.12695714099	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158392	128163051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128158588_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_87620_34	chr19	-	182	1	Intergenic	novelGene_5604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGCTTTAAGAAACTGG	5902	False	NA	NA	False	NA	NA	NA	5462594	5462412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5462400_5462600
Isoform_87621_18	chr19	+	2577	1	Genic_Genomic	ENSMUSG00000047423.11	novel	NA	NA	NA	NA	0	407	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGACAAAAAAAAAAAAAA	247	False	NA	NA	False	NA	NA	NA	5475171	5477748	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_+_5475200_5477700
Isoform_87625_4	chr19	+	872	1	FSM	ENSMUSG00000117771.2	ENSMUST00000237006.2	728	1	-58	-86	-58	86	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	5671	False	NA	NA	False	GATAAA	-25	NA	5485967	5486839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5486000_5486800
Isoform_87626_8	chr19	+	795	1	FSM	ENSMUSG00000117771.2	ENSMUST00000237006.2	728	1	19	-86	19	86	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	5748	False	NA	NA	False	GATAAA	-25	NA	5486044	5486839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5486000_5486800
Isoform_87634_4	chr19	+	159	1	Antisense	novelGene_ENSMUSG00000095098.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	8887	False	NA	NA	False	NA	NA	NA	5503518	5503677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_5503500_5503700
Isoform_87635_59	chr19	-	1006	1	FSM	ENSMUSG00000095098.3	ENSMUST00000179549.3	4715	1	343	3366	-47	-3361	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAGCCTGGCCAGCTT	5284	False	NA	-7	True	AATAAA	-17	NA	5507579	5506573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5506600_5507600
Isoform_8764_1300	chr10	+	943	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	69	371	14	-5	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158396	128163051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_8765_61	chr10	+	1009	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	3	371	3	-5	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158330	128163051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_87650_207	chr7	-	169	1	Intergenic	novelGene_9953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	29688190	29688021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_29688000_29688200
Isoform_87652_10	chr19	-	156	1	Intergenic	novelGene_5608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	5693858	5693702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5693700_5693900
Isoform_87653_17	chr19	-	169	1	Intergenic	novelGene_5609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	5783435	5783266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5783300_5783400
Isoform_87656_72	chr19	-	170	1	Intergenic	novelGene_5610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTATG	9452	False	NA	NA	False	NA	NA	NA	5836359	5836189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5836200_5836400
Isoform_87657_10	chr19	+	184	1	Intergenic	novelGene_5611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTCTGGCTGAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	5839739	5839923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_5839700_5839900
Isoform_87658_7	chr19	-	167	1	Intergenic	novelGene_5612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGTTACCTTTGTGT	8341	False	NA	NA	False	NA	NA	NA	5841668	5841501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5841500_5841700
Isoform_87659_3	chr19	-	290	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	6692	1	972	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGCTTCTTTGTGCA	4001	False	NA	-1	True	AATAAA	-16	NA	5846008	5845718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5845700_5846000
Isoform_8766_28	chr10	+	1275	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	64	44	9	-44	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTGTCATGTGGAATT	NA	False	NA	NA	False	TTTAAA	-18	NA	128158391	128163378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_87668_1404	chr19	-	885	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	1	6097	0	129	mono-exon	FALSE	NA	NA	NA	NA	NA	1404	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGCAAGATAGAAAAAC	4062	False	NA	-6	True	AATAGA	-8	NA	5852699	5851814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5851800_5852700
Isoform_8768_35	chr10	+	1066	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	-54	371	-54	-5	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158273	128163051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_87687_13	chr19	+	169	1	Intergenic	novelGene_5568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTAAAAAGAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	3612567	3612736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_3612600_3612700
Isoform_87689_5	chr19	+	10010	1	Antisense	novelGene_ENSMUSG00000092274.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	3268	False	NA	NA	False	NA	NA	NA	5881901	5891911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_5881900_5891900
Isoform_87691_395	chr19	-	3178	1	FSM	ENSMUSG00002076852.1	ENSMUST00020181828.1	152	1	-1039	-1987	-1039	1987	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTCATGGCTGTTACA	10003	False	NA	-4	True	AATAAA	-23	NA	5895504	5892326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_5892300_5895500
Isoform_87713_282	chr19	-	177	1	Intergenic	novelGene_5613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	8369	False	NA	NA	False	NA	NA	NA	5904474	5904297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5904300_5904500
Isoform_87715_9	chr19	-	170	1	Intergenic	novelGene_5614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAATTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	5940177	5940007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5940000_5940200
Isoform_87716_25	chr19	+	178	1	Intergenic	novelGene_5569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	3616061	3616239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_3616100_3616200
Isoform_87717_21	chr19	+	160	1	Intergenic	novelGene_5615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGAGTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	5945160	5945320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_5945200_5945300
Isoform_87719_3	chr19	+	165	1	Antisense	novelGene_ENSMUSG00000024826.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATCAATCAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	5950566	5950731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_5950600_5950700
Isoform_87720_78	chr19	-	176	1	Intergenic	novelGene_5616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	4655	False	NA	NA	False	NA	NA	NA	5959516	5959340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_5959300_5959500
Isoform_87721_3	chr19	+	1873	1	FSM	ENSMUSG00000110156.3	ENSMUST00000235359.2	1843	1	-31	1	3	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTCACACTACACAGCG	9358	False	NA	2	True	NA	NA	NA	5962983	5964856	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_5963000_5964900
Isoform_87722_35	chr19	+	177	1	Intergenic	novelGene_5617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATCTT	NA	False	NA	NA	False	NA	NA	NA	6028742	6028919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6028700_6028900
Isoform_87723_6	chr19	-	162	1	Intergenic	novelGene_5618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	6087356	6087194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_6087200_6087400
Isoform_87724_14	chr19	+	175	1	Intergenic	novelGene_5619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATTTTTAAAAAG	6016	False	NA	NA	False	NA	NA	NA	6091115	6091290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6091100_6091300
Isoform_87728_4	chr19	-	1199	1	Antisense	novelGene_ENSMUSG00000075227.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAACCACCACCACCA	9712	False	NA	NA	False	AATAAA	-17	NA	6112162	6110963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_6111000_6112200
Isoform_87729_237	chr19	+	1286	1	FSM	ENSMUSG00000075227.7	ENSMUST00000162726.5	1281	1	-6	1	-6	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGCAGTGCCTTTTCC	2527	False	NA	10	True	AATAAA	-21	NA	6111215	6112501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_6111200_6112500
Isoform_87732_6	chr19	-	339	1	Intergenic	novelGene_5570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACTAAACATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	3638782	3638443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_3638400_3638800
Isoform_87736_7	chr19	+	181	1	Intergenic	novelGene_5620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATCTTTTTTTTGTT	1056	False	NA	NA	False	NA	NA	NA	6173016	6173197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6173000_6173200
Isoform_87738_11	chr19	+	180	1	Intergenic	novelGene_5621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	6198249	6198429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6198200_6198400
Isoform_87740_6	chr19	+	153	1	Intergenic	novelGene_5622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAGGAAGGAAGGAA	NA	False	NA	6	True	AATAAA	-10	NA	6261404	6261557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6261400_6261600
Isoform_87750_276	chr19	+	177	1	Intergenic	novelGene_5623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAACAAGC	1417	False	NA	NA	False	NA	NA	NA	6377965	6378142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6378000_6378100
Isoform_87751_84	chr19	+	177	1	Intergenic	novelGene_5624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGTCAAATTTT	2204	False	NA	NA	False	NA	NA	NA	6378752	6378929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6378800_6378900
Isoform_87757_10	chr19	-	1180	1	Antisense	novelGene_ENSMUSG00000024949.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAAACAAG	NA	False	NA	NA	False	AATATA	-7	NA	6427226	6426046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_6426000_6427200
Isoform_87762_16	chr19	-	286	1	Intergenic	novelGene_5625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCCATGGCATAGGGCA	NA	False	NA	NA	False	NA	NA	NA	6445594	6445308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_6445300_6445600
Isoform_87767_24	chr19	+	175	1	Intergenic	novelGene_5628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGTAAAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	6839708	6839883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6839700_6839900
Isoform_87769_486	chr19	-	179	1	Intergenic	novelGene_5629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAAACACT	3011	False	NA	NA	False	NA	NA	NA	6867738	6867559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_6867600_6867700
Isoform_8777_4134	chr10	+	2855	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	68	3	-8	-3	multi-exon	FALSE	canonical	3	1246	junction_9	132.722869167299	4134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGAGCTTGCTCTTAC	NA	False	NA	15	True	AATAAA	-15	NA	128173670	128198345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
Isoform_87770_83	chrX	-	181	1	Intergenic	novelGene_11907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGATTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	35469651	35469470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_35469500_35469700
Isoform_87772_33	chr19	+	168	1	Intergenic	novelGene_5630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	6921712	6921880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6921700_6921900
Isoform_87773_20	chr19	-	166	1	Intergenic	novelGene_5631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGTAAATAAATAAATAAAT	9419	False	NA	NA	False	NA	NA	NA	6925133	6924967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_6925000_6925100
Isoform_87777_4	chr19	+	173	1	Intergenic	novelGene_5632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTGTGGTG	9787	False	NA	NA	False	NA	NA	NA	6960542	6960715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6960500_6960700
Isoform_87778_50	chr19	+	177	1	Intergenic	novelGene_5633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1595	False	NA	NA	False	NA	NA	NA	6978107	6978284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6978100_6978300
Isoform_87779_6	chr19	+	176	1	Intergenic	novelGene_5634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCCAG	4877	False	NA	NA	False	NA	NA	NA	6985506	6985682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_6985500_6985700
Isoform_8778_356	chr10	+	2923	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	3	0	3	0	multi-exon	TRUE	canonical	3	1246	junction_9	132.722869167299	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTGCTCTTACGTA	NA	False	NA	18	True	AATAAA	-18	NA	128173605	128198348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
Isoform_87781_15	chr19	-	176	1	Intergenic	novelGene_5635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTGAGCACGAGTG	-46	True	NA	NA	False	NA	NA	NA	6987738	6987562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_6987600_6987700
Isoform_87786_18	chr19	-	180	1	Intergenic	novelGene_5636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAGAAAAA	9097	False	NA	NA	False	NA	NA	NA	7030893	7030713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_7030700_7030900
Isoform_87788_3	chr19	-	783	1	Intergenic	novelGene_5637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGGAATGAAATTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	7114158	7113375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_7113400_7114200
Isoform_87789_23	chr19	+	170	1	Intergenic	novelGene_5638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCACTTTAGAGATTAC	NA	False	NA	5	True	NA	NA	NA	7147521	7147691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_7147500_7147700
Isoform_87790_33	chr19	-	178	1	Intergenic	novelGene_5639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTGCTTAAG	NA	False	NA	NA	False	NA	NA	NA	7150441	7150263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_7150300_7150400
Isoform_87792_3	chr19	-	174	1	Intergenic	novelGene_5640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	7187051	7186877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_7186900_7187100
Isoform_87793_20	chr19	+	177	1	Intergenic	novelGene_5641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	7188392	7188569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_7188400_7188600
Isoform_87794_13	chr19	+	188	1	Intergenic	novelGene_5572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAATGAAATTAATGGGA	NA	False	NA	NA	False	NA	NA	NA	3756099	3756287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_3756100_3756300
Isoform_87795_9	chr19	+	225	1	Intergenic	novelGene_5642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	7190065	7190290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_7190100_7190300
Isoform_87796_7	chr19	+	331	1	Intergenic	novelGene_5643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	7190065	7190396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_7190100_7190400
Isoform_87804_44	chr19	-	175	1	Intergenic	novelGene_5644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9253	False	NA	NA	False	NA	NA	NA	7197028	7196853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_7196900_7197000
Isoform_87813_59	chr19	-	180	1	Intergenic	novelGene_5645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTATGTTATTATTT	8267	False	NA	-6	True	NA	NA	NA	7224725	7224545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_7224500_7224700
Isoform_87814_33	chr19	+	177	1	Intergenic	novelGene_5646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	3270	False	NA	NA	False	NA	NA	NA	7225143	7225320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_7225100_7225300
Isoform_87815_115	chr19	-	175	1	Intergenic	novelGene_5647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATCTAATGCCA	4685	False	NA	NA	False	NA	NA	NA	7228307	7228132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_7228100_7228300
Isoform_87817_4	chr19	-	1974	1	Antisense	novelGene_ENSMUSG00000024968.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	7246228	7244254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_7244300_7246200
Isoform_87830_36	chr18	+	157	1	Intergenic	novelGene_5278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	18081412	18081569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr18_+_18081400_18081600
Isoform_87831_32	chr19	+	208	1	Intergenic	novelGene_5648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	7321244	7321452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_7321200_7321500
Isoform_87833_12	chr19	-	181	1	Intergenic	novelGene_5649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGGTTTTGGT	8830	False	NA	-4	True	NA	NA	NA	7333025	7332844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_7332800_7333000
Isoform_87836_52	chr19	-	1689	1	FSM	ENSMUSG00000095690.3	ENSMUST00000178377.3	654	1	-53	-982	-53	982	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCCCACTCTGCTGCCT	6551	False	NA	NA	False	NA	NA	NA	7376495	7374806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_7374800_7376500
Isoform_87845_12	chr19	+	4932	1	Antisense	novelGene_ENSMUSG00000024758.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7442042	7446974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_7442000_7447000
Isoform_87848_13	chr19	+	1098	1	NIC	ENSMUSG00000024759.15	novel	437	3	NA	NA	-1	-13948	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7471761	7472859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_7471800_7472900
Isoform_87851_73	chr19	-	181	1	Intergenic	novelGene_5650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9393	False	NA	NA	False	NA	NA	NA	7473896	7473715	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_7473700_7473900
Isoform_87852_52	chr19	+	178	1	Intergenic	novelGene_5651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	7476520	7476698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_7476500_7476700
Isoform_87853_17	chr19	-	183	1	Intergenic	novelGene_5573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATGTCTACAG	NA	False	NA	NA	False	NA	NA	NA	3787300	3787117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_3787100_3787300
Isoform_87854_3	chr19	+	209	1	Intergenic	novelGene_5652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGGCTGTGGAATGAC	NA	False	NA	NA	False	AAAAAG	-11	NA	8015747	8015956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_8015700_8016000
Isoform_87855_3	chr19	-	168	1	ISM	ENSMUSG00000117773.2	ENSMUST00000235154.2	692	2	71	2074	71	-2074	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGTAAAATT	NA	False	NA	NA	False	NA	NA	NA	3792466	3792298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_-_3792300_3792500
Isoform_87856_3	chr19	-	176	1	Intergenic	novelGene_5653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAGGAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	8627656	8627480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_8627500_8627700
Isoform_87857_4	chr19	+	176	1	Intergenic	novelGene_5654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAAAGAAAG	7038	False	NA	NA	False	NA	NA	NA	8674798	8674974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_8674800_8675000
Isoform_87864_100	chr19	-	690	1	NIC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	7	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTTTCTTTAAAAAAAAAA	NA	False	NA	-5	True	NA	NA	NA	8691236	8690546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_-_8690500_8691200
Isoform_87866_115	chr19	+	159	1	Intergenic	novelGene_5656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	8693115	8693274	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_8693100_8693300
Isoform_87867_5	chr19	+	288	1	Intergenic	novelGene_5657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAGCAAAGACAAAACT	NA	False	NA	NA	False	NA	NA	NA	8694052	8694340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_8694100_8694300
Isoform_87868_6	chr19	+	177	1	Intergenic	novelGene_5574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	7980	False	NA	NA	False	NA	NA	NA	3795350	3795527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_3795400_3795500
Isoform_87869_20	chr19	+	189	1	Intergenic	novelGene_5658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTGTTTGTTTTTGA	NA	False	NA	31	True	NA	NA	NA	8696533	8696722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_8696500_8696700
Isoform_87873_3	chr19	+	323	1	Intergenic	novelGene_5659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAAGAGCTC	3732	False	NA	NA	False	AATAAA	-17	NA	8706564	8706887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_8706600_8706900
Isoform_87874_17	chr19	-	176	1	Intergenic	novelGene_5660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9263	False	NA	NA	False	NA	NA	NA	8714104	8713928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_8713900_8714100
Isoform_87875_13	chr19	+	173	1	Intergenic	novelGene_5575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATGTGTGGCTTTA	NA	False	NA	NA	False	NA	NA	NA	3804733	3804906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_3804700_3804900
Isoform_87877_21	chr19	+	894	1	NIC	ENSMUSG00000117924.2	novel	748	2	NA	NA	7	-579	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6526	False	NA	NA	False	NA	NA	NA	8748366	8749260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_8748400_8749300
Isoform_87881_11	chr19	+	175	1	Intergenic	novelGene_5661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGTTTAATT	6565	False	NA	NA	False	NA	NA	NA	8763995	8764170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_8764000_8764200
Isoform_87882_4	chr19	+	196	1	Intergenic	novelGene_5662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGCCAGAGCTACAAAGT	1980	False	NA	NA	False	NA	NA	NA	8773043	8773239	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_8773000_8773200
Isoform_87883_4	chr19	+	256	1	Intergenic	novelGene_5663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAGCAAACAA	1982	False	NA	NA	False	NA	NA	NA	8773045	8773301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_8773000_8773300
Isoform_87886_3	chr19	+	2348	1	Genic_Genomic	ENSMUSG00000071661.8	novel	NA	NA	NA	NA	-61	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATCCCTTTGAACTGGT	5367	False	NA	7	True	CATAAA	-12	NA	8779857	8782205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_+_8779900_8782200
Isoform_87895_24	chr19	+	2453	1	ISM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	11679	2	11417	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCTATCTCCTGTGG	6207	False	NA	13	True	AATAAA	-16	NA	8809052	8811505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_8809100_8811500
Isoform_87904_9	chr19	-	252	1	Intergenic	novelGene_5576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTATCTATCTATCTAT	NA	False	NA	NA	False	NA	NA	NA	3812067	3811815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_3811800_3812100
Isoform_87906_186	chr19	-	200	1	Intergenic	novelGene_5664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8827318	8827118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_8827100_8827300
Isoform_87909_5	chr19	-	969	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	-85	-736	-85	736	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAATCCAATGG	NA	False	NA	NA	False	NA	NA	NA	8866134	8865165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8865200_8866100
Isoform_87911_71	chr19	-	378	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	-80	-150	-80	150	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCTGTGTTCGCTACC	NA	False	NA	-39	True	AATAAA	-15	NA	8866129	8865751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_-_8865800_8866100
Isoform_87935_3	chr19	+	7778	1	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	22132	3	11756	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTATCGTGCTCTTGTA	3920	False	NA	3	True	AATAAA	-16	NA	8988779	8996557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_8988800_8996600
Isoform_87936_4	chr19	+	7138	1	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	22775	0	12399	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCGTGCTCTTGTATTC	75	False	NA	6	True	AATAAA	-19	NA	8989422	8996560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_8989400_8996600
Isoform_87938_6	chr19	+	6225	1	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	23687	1	13311	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATCGTGCTCTTGTATT	44	False	NA	5	True	AATAAA	-18	NA	8990334	8996559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_8990300_8996600
Isoform_87950_9	chr19	+	4503	1	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	25409	1	15033	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATCGTGCTCTTGTATT	1405	False	NA	5	True	AATAAA	-18	NA	8992056	8996559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_8992100_8996600
Isoform_87957_9	chr19	+	3161	1	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	26752	0	16376	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCGTGCTCTTGTATTC	41	False	NA	6	True	AATAAA	-19	NA	8993399	8996560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_8993400_8996600
Isoform_87964_9	chr19	+	2193	1	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	27719	1	17343	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATCGTGCTCTTGTATT	1008	False	NA	5	True	AATAAA	-18	NA	8994366	8996559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr19_+_8994400_8996600
Isoform_87974_137	chr19	+	1272	1	FSM	ENSMUSG00000067608.6	ENSMUST00000088040.6	781	1	-140	-351	-140	351	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGTGACCATAGGTAT	NA	False	NA	NA	False	AATAAA	-37	NA	9260603	9261875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_9260600_9261900
Isoform_87979_7	chr19	-	190	1	Intergenic	novelGene_5578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGCTTTATAACAAGA	NA	False	NA	NA	False	NA	NA	NA	3826195	3826005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_3826000_3826200
Isoform_87980_14	chr19	+	2618	1	Genic_Genomic	ENSMUSG00000100141.2	novel	NA	NA	NA	NA	-287	1058	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9584180	9586798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_+_9584200_9586800
Isoform_87982_6	chr19	+	3700	1	Intergenic	novelGene_5666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3458	False	NA	NA	False	NA	NA	NA	9864785	9868485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_9864800_9868500
Isoform_87987_19	chr19	+	183	1	Intergenic	novelGene_5667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAACC	4408	False	NA	NA	False	NA	NA	NA	9989513	9989696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_9989500_9989700
Isoform_87991_13	chr19	-	175	1	Intergenic	novelGene_5668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAGAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	10104899	10104724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_10104700_10104900
Isoform_87992_71	chr19	-	211	1	Intergenic	novelGene_5669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAATGGTTCTAG	1777	False	NA	NA	False	NA	NA	NA	10120194	10119983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_10120000_10120200
Isoform_87994_17	chr19	-	222	1	Intergenic	novelGene_5670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAGAAGGAATCCTAAGC	NA	False	NA	NA	False	AAAAAG	-28	NA	10135853	10135631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_10135600_10135900
Isoform_87995_4	chr19	+	223	1	Intergenic	novelGene_5671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACCATCTTTGTAAGCC	NA	False	NA	NA	False	NA	NA	NA	10157623	10157846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_10157600_10157800
Isoform_88_30053	ERCC-00074	+	497	1	FSM	ERCC-00074A	DQ516754	506	1	1	8	1	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	30053	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCC	NA	False	NA	NA	False	NA	NA	NA	1	498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00074_+_0_500
Isoform_88016_13	chr19	+	3600	1	NIC	ENSMUSG00000036372.15	novel	606	4	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCCTCATGTCCATT	4181	False	NA	26	True	AATAAA	-15	NA	10181581	10185181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_10181600_10185200
Isoform_88017_4	chr19	+	179	1	Intergenic	novelGene_5672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAACAACAACAACAAA	5993	False	NA	NA	False	NA	NA	NA	10201238	10201417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_10201200_10201400
Isoform_88020_18	chr19	-	1865	1	Genic_Genomic	ENSMUSG00000034371.10	novel	NA	NA	NA	NA	15204	601	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10566418	10564553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_10564600_10566400
Isoform_88027_75	chr19	+	176	1	Intergenic	novelGene_5579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAATC	NA	False	NA	NA	False	NA	NA	NA	3879019	3879195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_3879000_3879200
Isoform_88028_27	chr12	-	177	1	Intergenic	novelGene_2510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATATAGATCATAC	NA	False	NA	NA	False	NA	NA	NA	31877283	31877106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_-_31877100_31877300
Isoform_88029_22	chr19	+	176	1	Intergenic	novelGene_5673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATCTTTTTTTATA	1889	False	NA	NA	False	NA	NA	NA	10861781	10861957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_10861800_10862000
Isoform_88031_8	chr19	+	155	1	Intergenic	novelGene_5674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAACAAAAAAAAAA	4869	False	NA	NA	False	NA	NA	NA	10864761	10864916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_10864800_10864900
Isoform_88032_3	chr19	+	177	1	Intergenic	novelGene_5580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGAGTGAGTGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	3881012	3881189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_3881000_3881200
Isoform_88035_9	chr19	+	171	1	Intergenic	novelGene_5675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	2450	False	NA	NA	False	NA	NA	NA	10954819	10954990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_10954800_10955000
Isoform_88038_5	chr19	+	4427	1	Antisense	novelGene_ENSMUSG00000041488.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTCAGAGCTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	11794061	11798488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_11794100_11798500
Isoform_88042_25	chr19	+	185	1	Intergenic	novelGene_5676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTTACATATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	11900123	11900308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_11900100_11900300
Isoform_88043_1071	chr19	+	170	1	Intergenic	novelGene_5677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1071	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTTTTAAAAAAAAG	2073	False	NA	-1	True	NA	NA	NA	11915202	11915372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_11915200_11915400
Isoform_88045_18	chr19	+	164	1	Intergenic	novelGene_5678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3582	False	NA	NA	False	NA	NA	NA	11962221	11962385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_11962200_11962400
Isoform_88047_30	chr19	+	173	1	Intergenic	novelGene_5679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATAAAAAATTAAGAAAGT	6750	False	NA	NA	False	NA	NA	NA	11965389	11965562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_11965400_11965600
Isoform_88051_21	chr19	-	179	1	Intergenic	novelGene_5680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATAGCTCCTCGTA	NA	False	NA	NA	False	NA	NA	NA	12083597	12083418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_12083400_12083600
Isoform_88053_28	chr19	+	158	1	Intergenic	novelGene_5681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	12496752	12496910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_12496800_12496900
Isoform_88055_3	chr19	-	2037	1	Genic_Genomic	ENSMUSG00000082848.2	novel	NA	NA	NA	NA	-16	-51784	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	9388	False	NA	NA	False	NA	NA	NA	3902435	3900398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr19_-_3900400_3902400
Isoform_88057_10	chr19	+	985	1	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	3	-14851	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACGAAAAAAAAAAAAAA	5782	False	NA	NA	False	NA	NA	NA	3901834	3902819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_3901800_3902800
Isoform_88058_8	chr19	-	204	1	Intergenic	novelGene_5682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAATGTCCT	NA	False	NA	NA	False	AATAAA	-5	NA	12689384	12689180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_12689200_12689400
Isoform_88068_133	chr19	+	175	1	Intergenic	novelGene_5683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14510795	14510970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_14510800_14511000
Isoform_88069_13	chr19	-	179	1	Intergenic	novelGene_5684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAAACGGGAA	NA	False	NA	NA	False	NA	NA	NA	14667367	14667188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_14667200_14667400
Isoform_8807_4	chr10	+	2237	3	ISM	ENSMUSG00000025373.15	ENSMUST00000217826.2	1984	6	-1	8887	-1	-8887	5prime_fragment	FALSE	canonical	3	130	junction_1	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAATTAAAATGAATTA	281	False	NA	NA	False	GATAAA	-24	NA	128247580	128266399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_128247695_128250987_128251171_128264459
Isoform_88078_7	chr19	+	2815	1	Antisense	novelGene_ENSMUSG00000024640.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15894731	15897546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_+_15894700_15897500
Isoform_88079_4	chr19	+	173	1	Intergenic	novelGene_5685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAACATATTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	15904354	15904527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_15904400_15904500
Isoform_8808_314	chr10	+	2234	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-9	919	-9	2	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTCTTATGCCCTTT	306	False	NA	NA	False	AAGAAA	-31	NA	128247605	128275288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
Isoform_88080_6	chr19	+	173	1	Intergenic	novelGene_5686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTTAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	15907377	15907550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_15907400_15907600
Isoform_88081_3	chr19	-	1945	1	Intergenic	novelGene_5687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16013473	16011528	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_16011500_16013500
Isoform_88083_11	chr19	-	173	1	Intergenic	novelGene_5688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	16098510	16098337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_16098300_16098500
Isoform_88088_9	chr19	-	177	1	Intergenic	novelGene_5689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGATTAAAATGG	NA	False	NA	NA	False	NA	NA	NA	16647653	16647476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_16647500_16647700
Isoform_8809_23	chr10	+	3155	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-10	-1	-10	1	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTCACCCCCCTT	305	False	NA	NA	False	AATAAA	-18	NA	128247604	128276208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
Isoform_88090_136	chr10	-	199	1	Intergenic	novelGene_1026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACATCCCAAACCAGCCA	NA	False	NA	NA	False	NA	NA	NA	78250916	78250717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_78250700_78250900
Isoform_88096_24	chr19	-	174	1	Intergenic	novelGene_5691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATTTAAG	NA	False	NA	NA	False	NA	NA	NA	19115141	19114967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_19115000_19115100
Isoform_88098_3	chr19	+	176	1	Intergenic	novelGene_5692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACATCAGTTATAG	NA	False	NA	NA	False	NA	NA	NA	19681444	19681620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_19681400_19681600
Isoform_8810_42	chr10	+	1663	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-100	1581	-11	-660	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGGGTAGAGTGAGGCA	215	False	NA	NA	False	AAGAAA	-17	NA	128247514	128274626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
Isoform_88101_8	chr19	-	203	1	Intergenic	novelGene_5693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATCAAAATAGTGTTAA	NA	False	NA	NA	False	NA	NA	NA	20399035	20398832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_20398800_20399000
Isoform_88103_286	chr19	-	175	1	Intergenic	novelGene_5694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	20900634	20900459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_20900500_20900600
Isoform_88108_10	chr19	+	1043	1	NIC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	6	-7107	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATAATATATAGGTCA	NA	False	NA	NA	False	NA	NA	NA	21249647	21250690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr19_+_21249600_21250700
Isoform_88110_8	chr19	+	184	1	Intergenic	novelGene_5695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	21417472	21417656	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_21417500_21417700
Isoform_88111_6	chr19	+	177	1	Intergenic	novelGene_5696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGGAAGACGAGG	NA	False	NA	NA	False	NA	NA	NA	21505520	21505697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_21505500_21505700
Isoform_88112_19	chr19	+	175	1	Intergenic	novelGene_5697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAAGATATTTA	NA	False	NA	NA	False	NA	NA	NA	21572575	21572750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_21572600_21572800
Isoform_88113_15	chr19	-	175	1	Intergenic	novelGene_5698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATGTG	NA	False	NA	NA	False	NA	NA	NA	21688009	21687834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_21687800_21688000
Isoform_88115_10	chr19	-	180	1	Intergenic	novelGene_5582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTTTTATTTTAAA	6392	False	NA	NA	False	NA	NA	NA	4072112	4071932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_4071900_4072100
Isoform_88116_37	chr19	-	166	1	Intergenic	novelGene_5699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21801112	21800946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_21800900_21801100
Isoform_8812_4	chr10	+	4358	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-128	-1086	-39	-17	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGGAAAGGACATTC	187	False	NA	NA	False	AATATA	-22	NA	128247486	128277293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
Isoform_88123_10	chr19	+	527	1	FSM	ENSMUSG00000118353.2	ENSMUST00000235917.2	780	1	-110	363	-110	-363	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAAAAAAGGCATG	NA	False	NA	6	True	NA	NA	NA	22418388	22418915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr19_+_22418400_22418900
Isoform_88124_38	chr19	-	5402	2	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	22705267	22699840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr19_-_22700901_22700925
Isoform_88132_33	chr19	-	172	1	Intergenic	novelGene_5701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGAAAGGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	22974426	22974254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_22974300_22974400
Isoform_88135_38	chr1	-	1272	6	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	1439.42688595149	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTACTGAAGCTCCT	620	False	NA	-9	True	AATAAA	-12	NA	59709962	59678601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_59679428_59681576_59681649_59683675_59683754_59691930_59692028_59694616_59694692_59709838
Isoform_88139_3002	chr1	-	1175	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	31	9	-11	-9	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	3002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTACTGAAGCTCCT	620	False	NA	-9	True	AATAAA	-12	NA	59709962	59678601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
Isoform_8814_9	chr10	+	4673	29	FSM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	-66	-45	-6	-5	multi-exon	FALSE	canonical	1	3	junction_18	29.4428493449771	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCATCTTGTGGGTGCC	2615	False	NA	41	True	TATAAA	-14	NA	128295110	128326036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
Isoform_88146_458	chr1	-	1646	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	8	8358	8	-1275	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137059	60117301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
Isoform_88147_40	chr1	-	2089	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	15	7908	15	-825	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTACATTTTACCCT	NA	False	NA	-32	True	TATAAA	-24	NA	60137052	60116851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
Isoform_88148_39	chr1	-	2189	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	15	7808	15	-725	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTTTTTGTTTTGTTTT	NA	False	NA	68	True	AGTAAA	-12	NA	60137052	60116751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
Isoform_88152_36	chr1	-	2901	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	15	7096	15	-13	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTTCCTGACTTAACT	NA	False	NA	NA	False	AATAAA	-10	NA	60137052	60116039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
Isoform_88164_20	chr1	-	1575	14	FSM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	0	1275	0	-1275	multi-exon	FALSE	canonical	3	10	junction_13	257.719103084491	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137305	60117301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137203
Isoform_88166_16	chr1	-	2056	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	725	-29	-725	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTTTTTGTTTTGTTTT	NA	False	NA	68	True	AGTAAA	-12	NA	60137334	60116751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
Isoform_88168_184	chr1	-	1505	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	1276	-29	-1276	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137334	60117302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
Isoform_8817_31	chr10	+	4586	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-52	-1	-6	1	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGGTGCCTCTGTG	2615	False	NA	47	True	TATAAA	-20	NA	128295110	128326042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
Isoform_88181_15	chr1	-	2079	14	NIC	ENSMUSG00000026014.16	novel	2241	16	NA	NA	52	-5	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	4.5573271518765	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCTGGTTTTAAAGCT	NA	False	NA	-10	True	NA	NA	NA	60605872	60522348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_60522500_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
Isoform_88183_8	chr1	-	2218	14	NIC	ENSMUSG00000026014.16	novel	2241	16	NA	NA	-73	-5	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	4.5573271518765	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCTGGTTTTAAAGCT	NA	False	NA	-10	True	NA	NA	NA	60606011	60522348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_60522500_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
Isoform_88184_3	chr1	-	4541	13	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	68	8631	54	-247	5prime_fragment	FALSE	canonical	3	25	junction_2	4.25163367294137	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTTACCTGCATTGCTG	NA	False	NA	NA	False	AGTAAA	-19	NA	60605870	60530081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
Isoform_88185_3	chr1	-	1939	10	FSM	ENSMUSG00000040865.16	ENSMUST00000137511.8	1979	10	0	40	0	-26	multi-exon	FALSE	canonical	1	2	junction_9	2.18298696715428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACGAAGCCCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	63153493	63101348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_63101413_63104862_63104997_63107342_63107453_63113480_63113706_63118111_63118221_63124826_63125558_63132443_63132691_63132798_63132890_63144814_63144919_63153369
Isoform_8819_4	chr10	+	4989	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-41	-415	5	105	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCGTTCGGTACTTGG	2626	False	NA	NA	False	AGTAAA	-20	NA	128295121	128326456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
Isoform_88198_234	chr1	-	2774	20	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	123	junction_19	206.17340683078	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63215839	63182761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
Isoform_88199_28	chr1	-	2905	20	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	12	2	intron_retention	FALSE	canonical	3	123	junction_19	206.17340683078	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTGATATTAAAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	63215969	63182760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
Isoform_88202_68	chr1	-	2727	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63215950	63182761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
Isoform_88203_244	chr1	-	2629	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTAAAGTGTGAAGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	63215843	63182752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
Isoform_88208_360	chr1	-	2654	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	69	-133	0	2	multi-exon	FALSE	canonical	3	212	junction_18	163.056757519704	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTGATATTAAAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	63215822	63182760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
Isoform_88209_37	chr1	-	2791	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	-59	-142	2	3	multi-exon	FALSE	canonical	3	212	junction_18	163.056757519704	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAAGTGTGAAGTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	63215950	63182751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
Isoform_88214_128	chr1	-	2623	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	32	6	3	2	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTGATATTAAAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	63215949	63182760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
Isoform_88215_509	chr1	-	2502	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	159	0	0	0	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215822	63182754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
Isoform_88223_3	chr1	-	3994	5	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-3	-3400	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	5.02493781056044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAATGCAAAA	NA	False	NA	NA	False	NA	NA	NA	64161444	64072005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058_64160299_64161360
Isoform_88227_5	chr1	-	2665	3	FSM	ENSMUSG00000025956.11	ENSMUST00000053469.2	2666	3	1	0	1	0	multi-exon	FALSE	canonical	3	51	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTACCTGTCAGTGTTG	NA	False	NA	-7	True	ATTAAA	-13	NA	64656326	64645638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64647297_64654256_64654369_64655431
Isoform_88228_8	chr1	-	2060	3	FSM	ENSMUSG00000025956.11	ENSMUST00000053469.2	2666	3	-2	608	-2	-608	multi-exon	FALSE	canonical	3	51	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAACTTGTAGGTTAGA	NA	False	NA	0	True	AATAAA	-24	NA	64656329	64646246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64647297_64654256_64654369_64655431
Isoform_88229_16	chr1	-	2018	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	12	0	12	0	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCAGTGTTGTCTTCTG	NA	False	NA	0	True	ATTAAA	-20	NA	64656389	64645631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
Isoform_88230_17	chr1	-	1979	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	48	3	-10	-3	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGTCAGTGTTGTCTT	NA	False	NA	-3	True	ATTAAA	-17	NA	64656353	64645634	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
Isoform_88231_8	chr1	-	2564	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	-535	1	-535	-1	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCAGTGTTGTCTTCT	NA	False	NA	-1	True	ATTAAA	-19	NA	64656936	64645632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
Isoform_88236_40	chr1	-	677	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	30	4	-1	-4	multi-exon	FALSE	canonical	3	111	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAACAGTGCTACCT	7957	False	NA	-20	True	AATAAA	-17	NA	64729788	64719033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64719545_64729622
Isoform_88239_145	chr1	-	3055	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	5	3855	3	56	multi-exon	FALSE	canonical	3	55	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTATA	NA	False	NA	-4	True	AATATA	-15	NA	64776905	64773571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64776013_64776291
Isoform_8824_14	chr10	+	4608	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-74	-1	-28	1	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGGTGCCTCTGTG	2593	False	NA	47	True	TATAAA	-20	NA	128295088	128326042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
Isoform_88243_13	chr1	-	6908	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	5	2	3	-2	multi-exon	FALSE	canonical	3	55	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGGCGTTGAGTCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	64776905	64769718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64776013_64776291
Isoform_88244_14	chr1	-	6731	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	182	2	180	-2	multi-exon	FALSE	canonical	3	55	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGGCGTTGAGTCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	64776728	64769718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64776013_64776291
Isoform_88245_77	chr1	-	2771	2	FSM	ENSMUSG00000045005.10	ENSMUST00000116133.4	2895	2	180	-56	180	56	multi-exon	FALSE	canonical	3	23	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTATA	NA	False	NA	-4	True	AATATA	-15	NA	64776728	64773571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64776013_64776398
Isoform_88246_68	chr1	-	2950	2	FSM	ENSMUSG00000045005.10	ENSMUST00000116133.4	2895	2	1	-56	1	56	multi-exon	FALSE	canonical	3	23	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTATA	NA	False	NA	-4	True	AATATA	-15	NA	64776907	64773571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_64776013_64776398
Isoform_88249_3	chr1	-	8556	8	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	8.71311467541538	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCATATCAGCTTTA	NA	False	NA	-4	True	AATAAA	-16	NA	64995896	64828278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995773
Isoform_88254_3	chr1	-	631	3	FSM	ENSMUSG00000070870.7	ENSMUST00000087359.6	631	3	-4	4	-4	-1	multi-exon	FALSE	canonical	3	12	junction_1	7	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACAGAGTTCTCTGTTCC	NA	False	NA	NA	False	AATAAA	-24	NA	65090312	65087716	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_65088056_65089928_65090172_65090263
Isoform_88255_13	chr1	-	701	3	FSM	ENSMUSG00000067299.12	ENSMUST00000045028.15	613	3	-58	-30	-58	30	multi-exon	FALSE	canonical	3	39	junction_1	4.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATTTGCTTCTGTTTTTT	7562	False	NA	-4	True	AATAAA	-24	NA	65102669	65101000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_65101342_65102217_65102461_65102552
Isoform_88257_3	chr1	-	815	4	NNC	ENSMUSG00000044816.11	novel	1156	8	NA	NA	12907	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	13.4412301024373	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAACTGGATGTCAGC	9682	False	NA	NA	False	AATAAA	-7	NA	65149366	65144447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_65144910_65148620_65148736_65149035_65149124_65149216
Isoform_88269_1568	chr1	-	2188	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	109	5	109	-3	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTGTTTATTATGTGT	NA	False	NA	-11	True	ATTAAA	-23	NA	65218231	65197779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
Isoform_88270_413	chr1	-	2226	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	69	7	69	-5	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAAGTGTTTATTATGT	NA	False	NA	-13	True	ATTAAA	-21	NA	65218271	65197781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
Isoform_88277_33	chr1	-	2346	10	NIC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	3	34	junction_9	367.996712277316	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	-12	True	ATTAAA	-22	NA	65225634	65197780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65220786_65220858_65225463
Isoform_88279_82	chr1	-	2275	9	FSM	ENSMUSG00000025950.17	ENSMUST00000169032.8	2283	9	4	4	4	-4	multi-exon	FALSE	canonical	3	72	junction_8	288.761904516506	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	-12	True	ATTAAA	-22	NA	65225634	65197780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65225463
Isoform_8828_10	chr10	+	4866	28	FSM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	-16	-818	-3	2	multi-exon	FALSE	canonical	3	31	junction_27	21.277769719239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	2678	False	NA	48	True	TATAAA	-21	NA	128295173	128326043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
Isoform_88281_11	chr1	-	1626	2	FSM	ENSMUSG00000026004.16	ENSMUST00000189846.2	1600	2	-49	23	-33	-23	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCAAAACCAAACAAAAAAC	6591	False	NA	NA	False	AATAAA	-21	NA	66856754	66839923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_66841328_66856532
Isoform_88282_40	chr1	-	1965	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-67	18	-67	-18	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTGTAGACCGTGTG	NA	False	NA	-37	True	AATAAA	-11	NA	66902503	66870015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
Isoform_88285_66	chr1	-	1516	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-40	440	-40	-440	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGGGAGAGAGAAATT	NA	False	NA	-15	True	AATAAA	-18	NA	66902476	66870437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
Isoform_8829_6	chr10	+	4956	28	FSM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	-110	-814	-37	-2	multi-exon	FALSE	canonical	3	31	junction_27	21.277769719239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATCTTGTGGGTGCCTCT	2584	False	NA	44	True	TATAAA	-17	NA	128295079	128326039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
Isoform_88292_153	chr1	-	1563	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	39	2859	1	-1	multi-exon	FALSE	canonical	3	327	junction_5	113.959902487673	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTCGAGTTTTTATTTC	NA	False	NA	-6	True	AATGAA	-15	NA	67077992	67042534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
Isoform_88296_5	chr1	-	4428	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	32	1	-6	-1	multi-exon	FALSE	canonical	3	327	junction_5	113.959902487673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCGGGTACTGTTGTTT	NA	False	NA	-3	True	AATAAA	-16	NA	67077999	67039676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
Isoform_88297_5	chr1	-	1433	10	FSM	ENSMUSG00000026000.17	ENSMUST00000119559.8	1385	10	-49	1	-11	-1	multi-exon	FALSE	canonical	0	0	junction_9	165.875529714376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTCGAGTTTTTATTTC	NA	False	NA	-6	True	AATGAA	-15	NA	67078042	67042534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077930
Isoform_88298_51	chr1	-	1406	10	FSM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	5	2859	5	-1	multi-exon	FALSE	canonical	3	56	junction_9	152.892845556037	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTCGAGTTTTTATTTC	NA	False	NA	-6	True	AATGAA	-15	NA	67078019	67042534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077934
Isoform_88299_97	chr1	-	1373	10	NIC	ENSMUSG00000026000.17	novel	4270	10	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	146.548774167089	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTCGAGTTTTTATTTC	NA	False	NA	-6	True	AATGAA	-15	NA	67078012	67042534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
Isoform_88300_10	chr1	-	4232	10	NIC	ENSMUSG00000026000.17	novel	4270	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	146.548774167089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCGGGTACTGTTGTTTG	NA	False	NA	-2	True	AATAAA	-17	NA	67078012	67039675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
Isoform_88301_69	chr1	-	2649	11	FSM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	180	2830	180	-2830	multi-exon	FALSE	canonical	3	27	junction_8	5.88642506110457	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGTTGTTGTTCTTT	NA	False	NA	-2	True	NA	NA	NA	71142125	71069486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
Isoform_88303_3	chr1	-	2414	9	NIC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	176	-2869	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	13.5917024319987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGAATTCATTTTGAT	NA	False	NA	-41	True	AATAAA	-14	NA	71142129	71069525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71141826
Isoform_8835_18	chr10	+	3496	15	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	15216	-2	309	2	3prime_fragment	FALSE	canonical	3	76	junction_14	15.1489206189209	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	6990	False	NA	48	True	TATAAA	-21	NA	128310378	128326043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
Isoform_8837_5	chr10	+	3831	15	ISM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	15193	-815	313	-1	3prime_fragment	FALSE	canonical	3	31	junction_14	24.434940690139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGTGGGTGCCTCTG	6994	False	NA	45	True	TATAAA	-18	NA	128310382	128326040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
Isoform_8838_3	chr10	+	2091	12	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-14	-109	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	22.1784647241567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTTTTGTTGCTGTTCGT	NA	False	NA	9	True	AATAAA	-20	NA	128540049	128555998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128540098_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
Isoform_8840_54	chr10	+	2174	12	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-31	-114	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	18.002295537739	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGGGCTTTTGTTGCTG	NA	False	NA	4	True	AATAAA	-15	NA	128541017	128555993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128541154_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
Isoform_8841_4	chr10	+	2237	12	NNC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-31	-114	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	21.6932026524973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGGGCTTTTGTTGCTG	NA	False	NA	4	True	AATAAA	-15	NA	128541017	128555993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128541154_128542041_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
Isoform_88410_1191	chr1	-	8312	46	FSM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	4	-1	1	0	multi-exon	FALSE	canonical	3	1514	junction_37	371.719226311845	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
Isoform_88412_217	chr1	-	8342	46	FSM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	-26	-1	-1	0	multi-exon	FALSE	canonical	3	1514	junction_37	371.719226311845	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692360	71624681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
Isoform_8842_80	chr10	+	2021	11	FSM	ENSMUSG00000025359.11	ENSMUST00000054125.9	2130	11	0	109	0	-109	multi-exon	FALSE	canonical	3	48	junction_3	12.3385574521497	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTTTTGTTGCTGTTCGT	NA	False	NA	9	True	AATAAA	-20	NA	128542126	128555998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
Isoform_8843_3	chr10	+	1464	6	ISM	ENSMUSG00000025359.11	ENSMUST00000054125.9	2130	11	9569	110	9569	-110	3prime_fragment	FALSE	canonical	3	56	junction_1	10.8811764069884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTTTTGTTGCTGTTCG	NA	False	NA	8	True	AATAAA	-19	NA	128551695	128555997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
Isoform_8844_10	chr10	+	1212	4	NIC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	137.41502424731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCAGGCTTTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	128583757	128602431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128583868_128586151_128586207_128601015_128601110_128601478
Isoform_88444_281	chr1	-	8040	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	1	2	1	1	multi-exon	TRUE	canonical	3	355	junction_21	441.858289425336	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
Isoform_8845_3	chr10	+	1361	4	NNC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	19.8662192343351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCAGGCTTTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	128583759	128602431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128583868_128586151_128586207_128601015_128601261_128601478
Isoform_88450_63	chr1	-	8043	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	1	intron_retention	FALSE	canonical	3	134	junction_13	462.096137608357	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
Isoform_8846_8	chr10	+	1525	2	ISM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	0	2	0	-2	intron_retention	FALSE	canonical	3	275	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128583757	128602430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_128583868_128601015
Isoform_88466_1159	chr1	-	2444	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	48	-208	48	208	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGTGTGTGTTATATT	4270	False	NA	-5	True	ATTAAA	-22	NA	72251418	72198392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
Isoform_88468_350	chr1	-	2524	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	-32	-208	-32	208	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGTGTGTGTTATATT	4190	False	NA	-5	True	ATTAAA	-22	NA	72251498	72198392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
Isoform_8847_224	chr10	+	1156	3	FSM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	2	0	2	0	multi-exon	FALSE	canonical	3	275	junction_1	26	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTCAGGCTTTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	128583759	128602432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128583868_128601015_128601110_128601478
Isoform_88471_69	chr1	-	2564	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	-72	-208	-72	208	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGTGTGTGTTATATT	4150	False	NA	-5	True	ATTAAA	-22	NA	72251538	72198392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
Isoform_8848_5	chr10	+	1306	3	NNC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	127.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCAGGCTTTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	128583759	128602431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128583868_128601015_128601261_128601478
Isoform_88482_142	chr1	-	1190	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	-6	2	-6	-2	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGTTATCTTTTAAGGA	NA	False	NA	-8	True	AATAAA	-17	NA	72323479	72298332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
Isoform_88483_5	chr1	-	939	6	NIC	ENSMUSG00000026189.14	novel	1186	8	NA	NA	-5	-4	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	98.9432160382914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCGGTTATCTTTTAAG	NA	False	NA	-10	True	AATAAA	-15	NA	72323478	72298334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72316445_72316580_72323251
Isoform_88485_3	chr1	-	1168	6	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	56	7823	1	1	5prime_fragment	FALSE	canonical	1	70	junction_3	74.7786065663168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATGAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	72323417	72306153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
Isoform_88486_3	chr1	-	1230	6	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	-5	7822	-5	2	5prime_fragment	FALSE	canonical	1	70	junction_3	74.7786065663168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	72323478	72306152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
Isoform_8849_6	chr10	+	1170	4	FSM	ENSMUSG00000064030.16	ENSMUST00000218218.2	1143	4	-29	2	-29	-1	multi-exon	FALSE	canonical	3	5	junction_1	140.632697320202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCAGGCTTTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	128584367	128602431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128584436_128586151_128586207_128601015_128601110_128601478
Isoform_88490_5	chr1	-	6200	33	NIC	ENSMUSG00000055322.17	novel	9916	33	NA	NA	44	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_32	14.0823124321789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTGTCCCTTGTGA	NA	False	NA	-6	True	NA	NA	NA	74130466	73953071	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74130331
Isoform_88491_3	chr1	-	6587	33	NIC	ENSMUSG00000055322.17	novel	9904	33	NA	NA	-66	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_32	15.0083310198036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTGTCCCTTGTGAT	NA	False	NA	-5	True	NA	NA	NA	74137901	73953070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74137380
Isoform_88492_9	chr1	-	6286	33	FSM	ENSMUSG00000055322.17	ENSMUST00000191104.7	9904	33	-61	3679	-61	0	multi-exon	FALSE	canonical	3	25	junction_32	13.8921276605673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCTTGTGATA	NA	False	NA	-4	True	NA	NA	NA	74163669	73953069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
Isoform_88501_1804	chr1	-	1746	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	65	6	7	0	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323832	74319004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
Isoform_88502_26	chr1	-	1810	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	1	6	1	0	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323896	74319004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
Isoform_88504_133	chr1	-	1749	11	FSM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	7	0	7	0	multi-exon	FALSE	canonical	3	93	junction_10	361.877106211487	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323832	74319004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323204_74323661
Isoform_88509_14	chr1	-	2439	12	NIC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	38.0389100486062	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTGAGTTGCTGTGGC	NA	False	NA	-8	True	AATAAA	-20	NA	74343279	74327407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74342933
Isoform_8851_41	chr10	+	1098	3	FSM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	61	-3	-12	-1	multi-exon	FALSE	canonical	3	93	junction_1	117	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCAGGCTTTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	128584384	128602431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128584436_128601015_128601110_128601478
Isoform_88510_288	chr1	-	2126	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	249	3	-36	1	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTTGAGTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-19	NA	74343315	74327408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
Isoform_88511_37	chr1	-	2167	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	208	3	18	1	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTTGAGTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-19	NA	74343356	74327408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
Isoform_88513_10	chr1	-	2383	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	-8	3	-8	1	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTTGAGTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-19	NA	74343572	74327408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
Isoform_88515_11	chr1	-	2329	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	44	5	0	-1	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACCCTTGAGTTGCTGT	NA	False	NA	-11	True	AATAAA	-17	NA	74343520	74327410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
Isoform_88517_5	chr1	-	2196	12	NIC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	37.2398968494191	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTTGAGTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-19	NA	74344775	74327408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74344671
Isoform_8852_3	chr10	+	1725	3	FSM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	-564	-5	2	0	multi-exon	FALSE	canonical	3	93	junction_1	117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCAGGCTTTGGCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	128583759	128602433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128584436_128601015_128601110_128601478
Isoform_88527_6	chr1	-	7357	26	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_24	59.3845232362777	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74544985	74474668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535252_74539114_74539260_74544818
Isoform_8853_8	chr10	+	3097	7	ISM	ENSMUSG00000025355.8	ENSMUST00000026411.8	3402	9	3603	-3	3602	3	3prime_fragment	FALSE	canonical	1	1	junction_5	1.89296944860009	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTGTTTCAGAGTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	128630432	128636696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_128630526_128630688_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
Isoform_88532_4	chr1	-	5045	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-86	-2	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGAGTCTCCTTTTGT	NA	False	NA	-3	True	TTTAAA	-30	NA	74545051	74476890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
Isoform_88533_139	chr1	-	7183	25	NIC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74544968	74474669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
Isoform_88536_28	chr1	-	7225	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-44	1	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74545009	74474668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
Isoform_88539_9	chr1	-	7468	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-303	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_24	45.4335404434017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGTTTGATTTATT	NA	False	NA	-3	True	ATTAAA	-14	NA	74545745	74474671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74545308
Isoform_88541_7	chr1	-	3884	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	-64	3291	-61	325	multi-exon	FALSE	canonical	3	36	junction_8	42.9588980155981	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTATTTCTGTAGCCTG	NA	False	NA	-6	True	ACTAAA	-21	NA	74545026	74477960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
Isoform_88542_28	chr1	-	7111	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	1	-1	1	1	multi-exon	TRUE	canonical	3	36	junction_8	42.9588980155981	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74544961	74474668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
Isoform_88546_4	chr1	-	5889	9	FSM	ENSMUSG00000026135.18	ENSMUST00000113737.8	7473	9	24	1560	21	-4	multi-exon	FALSE	canonical	1	5	junction_7	16.2307578381294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTGACTTCTTGAGT	NA	False	NA	NA	False	TATAAA	-16	NA	74627163	74605845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618778_74624542_74624857_74626722
Isoform_88547_3	chr1	-	5727	10	NIC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	18.891503087073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGACTTCTTGAGTA	NA	False	NA	NA	False	TATAAA	-17	NA	74627173	74605844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618778_74624542_74624857_74626722_74626911_74627083
Isoform_88548_8	chr1	-	6230	9	FSM	ENSMUSG00000026135.18	ENSMUST00000027315.14	6480	9	-11	261	-8	-4	multi-exon	FALSE	canonical	3	25	junction_7	11.659223816361	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTGACTTCTTGAGT	NA	False	NA	NA	False	TATAAA	-16	NA	74627195	74605845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722
Isoform_88549_3	chr1	-	6463	9	FSM	ENSMUSG00000026135.18	ENSMUST00000027315.14	6480	9	-6	23	-3	-23	multi-exon	FALSE	canonical	3	25	junction_7	11.659223816361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGACTTGTTTGGATC	NA	False	NA	-9	True	NA	NA	NA	74627190	74605607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722
Isoform_8855_601	chr10	+	3025	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	2	1106	2	650	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	4018	False	NA	NA	False	TATAAA	-19	NA	128641424	128654022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
Isoform_88550_3	chr1	-	5971	9	NNC	ENSMUSG00000026135.18	novel	6480	9	NA	NA	-1	-5	intron_retention	TRUE	canonical	3	7	junction_7	15.708278072405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACACTGACTTCTTGAG	NA	False	NA	NA	False	TATAAA	-15	NA	74627188	74605846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618836_74624542_74624857_74626722
Isoform_88551_3	chr1	-	5561	8	NIC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	16.630436812406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGACTTCTTGAGTA	NA	False	NA	NA	False	TATAAA	-17	NA	74627128	74605844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74624542_74624857_74626722
Isoform_88553_3	chr1	-	5847	8	NIC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	15	-15	intron_retention	FALSE	canonical	2	5	junction_6	16.630436812406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGGATCCCTGTCCT	NA	False	NA	-1	True	NA	NA	NA	74627169	74605599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74624542_74624857_74626722
Isoform_88554_32	chr1	-	1448	10	FSM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	4	-1	-1	1	multi-exon	FALSE	canonical	3	22	junction_3	27.6463557752974	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	74640532	74632910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
Isoform_88555_108	chr1	-	1451	10	FSM	ENSMUSG00000026171.13	ENSMUST00000027357.12	1479	10	24	4	-1	1	multi-exon	FALSE	canonical	3	94	junction_3	8.63384096891663	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	74640532	74632910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
Isoform_88556_6	chr1	-	1547	9	NIC	ENSMUSG00000026171.13	novel	1479	10	NA	NA	-2	1	intron_retention	FALSE	canonical	3	94	junction_3	8.63767185067828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	74640533	74632910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637952_74638224_74638300_74640483
Isoform_88557_10	chr1	-	1408	8	FSM	ENSMUSG00000026162.9	ENSMUST00000152855.3	1586	8	-34	212	-34	-212	multi-exon	FALSE	canonical	3	10	junction_7	8.89622712968015	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGGTTACCTGTGAT	NA	False	NA	-5	True	AATAAA	-20	NA	75101878	75006509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75101779
Isoform_88558_11	chr1	-	1334	8	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-37	-211	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	8.89622712968015	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGGTTACCTGTGATC	NA	False	NA	-4	True	AATAAA	-21	NA	75101881	75006508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097397_75101779
Isoform_88559_4	chr1	-	1929	7	NIC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-33	-209	intron_retention	FALSE	canonical	3	10	junction_6	9.3526585643988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTTACCTGTGATCTC	NA	False	NA	-2	True	AATAAA	-23	NA	75101877	75006506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_75006928_75007327_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75101779
Isoform_88560_4	chr1	-	1838	7	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-26	-215	intron_retention	FALSE	canonical	3	10	junction_6	9.3526585643988	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTTGAGGTTACCTGT	NA	False	NA	-8	True	AATAAA	-17	NA	75101870	75006512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_75006928_75007327_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097397_75101779
Isoform_88561_30	chr1	-	1953	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	107	2	107	1	multi-exon	FALSE	canonical	3	148	junction_4	12.6426553656215	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGCCTTTTCCTTCT	7013	False	NA	-15	True	AATAAA	-15	NA	75118228	75112413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
Isoform_88564_4	chr1	-	3043	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	-981	0	25	0	multi-exon	FALSE	canonical	3	148	junction_4	12.6426553656215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTTTTCCTTCTGT	9333	False	NA	-13	True	AATAAA	-17	NA	75119316	75112411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
Isoform_88565_131	chr1	-	2486	9	FSM	ENSMUSG00000033159.15	ENSMUST00000168720.8	3669	9	-33	1216	26	1	multi-exon	FALSE	canonical	3	100	junction_8	23.1405353222435	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGCCTTTTCCTTCT	9334	False	NA	-15	True	AATAAA	-15	NA	75119315	75112413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701
Isoform_88568_47	chr1	-	2403	10	FSM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	27	-1	27	1	multi-exon	TRUE	canonical	3	17	junction_9	47.8820567438857	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGCCTTTTCCTTCT	9335	False	NA	-15	True	AATAAA	-15	NA	75119314	75112413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701_75119205_75119286
Isoform_88569_14	chr1	-	2434	10	FSM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	-4	-1	-4	1	multi-exon	FALSE	canonical	3	17	junction_9	47.8820567438857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGCCTTTTCCTTCT	9304	False	NA	-15	True	AATAAA	-15	NA	75119345	75112413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701_75119205_75119286
Isoform_8857_30	chr10	+	3815	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	-790	1108	702	648	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATCTTCCTTCTCTTCTT	3226	False	NA	NA	False	TATAAA	-17	NA	128640632	128654020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
Isoform_88573_256	chr1	-	2863	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	104	-1	-2	1	multi-exon	FALSE	canonical	3	123	junction_18	16.1765910736914	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGGTTTGGTTGTGT	NA	False	NA	-1	True	AATAAA	-16	NA	75156932	75148359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
Isoform_88574_86	chr1	-	2967	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	0	-1	0	1	multi-exon	FALSE	canonical	3	123	junction_18	16.1765910736914	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGGTTTGGTTGTGT	NA	False	NA	-1	True	AATAAA	-16	NA	75157036	75148359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
Isoform_88579_14	chr1	-	2963	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	98	-95	-8	95	multi-exon	TRUE	canonical	3	123	junction_18	16.1765910736914	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGCCAGTCTTTACTC	NA	False	NA	93	True	AAAAAG	-22	NA	75156938	75148265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
Isoform_88584_23	chr1	-	3907	16	FSM	ENSMUSG00000033124.17	ENSMUST00000189702.7	4110	16	198	5	-3	0	multi-exon	FALSE	canonical	3	11	junction_15	11.6714276000077	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168372	75157508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168130
Isoform_88585_52	chr1	-	3784	16	FSM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	-19	-1	13	0	multi-exon	FALSE	canonical	3	19	junction_15	10.0013332444563	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168586	75157508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168467
Isoform_88586_12	chr1	-	3903	16	NIC	ENSMUSG00000033124.17	novel	4041	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	12.1043610139303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168365	75157508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168130
Isoform_88587_43	chr1	-	3806	16	FSM	ENSMUSG00000033124.17	ENSMUST00000188347.7	4041	16	235	0	1	0	multi-exon	FALSE	canonical	3	15	junction_15	10.8226100774669	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168605	75157508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168467
Isoform_88589_11	chr1	-	3949	16	ISM	ENSMUSG00000026200.14	ENSMUST00000113623.8	2339	17	1284	-1807	0	696	3prime_fragment	FALSE	canonical	2	6	junction_6	4.27083130081252	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGACATGAAGTGTTTTT	6518	False	NA	NA	False	TATAAA	-16	NA	75186138	75174183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024
Isoform_88599_293	chr1	-	2052	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	41	747	-10	-3	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTGTGCTTTCTTTT	NA	False	NA	-5	True	ATTAAA	-17	NA	75195897	75191618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
Isoform_88600_902	chr1	-	1477	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	41	1322	-10	62	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCCCTTTGTAACTG	NA	False	NA	-15	True	AATAAA	-19	NA	75195897	75192193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
Isoform_88606_18	chr1	-	2285	3	FSM	ENSMUSG00000026202.14	ENSMUST00000187103.2	815	3	-9	-1461	-9	-2	multi-exon	FALSE	canonical	3	248	junction_1	30.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTGCTTTCTTTTG	NA	False	NA	-4	True	ATTAAA	-18	NA	75195896	75191617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75193620_75193855_75194079_75195836
Isoform_88608_6	chr1	-	3537	23	FSM	ENSMUSG00000026204.16	ENSMUST00000027404.12	3554	23	2	15	2	-15	multi-exon	TRUE	canonical	0	0	junction_15	2.05553073719909	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGATGCCTTTGAGGCG	NA	False	NA	-6	True	AATAAA	-27	NA	75240855	75223685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75224265_75224480_75224555_75224745_75224811_75225369_75225424_75228394_75228562_75228899_75229020_75229111_75229190_75229414_75229489_75229655_75229804_75229903_75230105_75230566_75230786_75231228_75231294_75231422_75231503_75231768_75231856_75232270_75232546_75233486_75233525_75233936_75234069_75234588_75234941_75235022_75235282_75237214_75237312_75238670_75238785_75238966_75239018_75240647
Isoform_88612_154	chr1	-	1678	14	FSM	ENSMUSG00000026209.16	ENSMUST00000187836.7	1862	14	184	0	-20	0	multi-exon	FALSE	canonical	3	848	junction_13	52.2384156632446	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293609	75285208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353
Isoform_88613_52	chr1	-	1716	14	FSM	ENSMUSG00000026209.16	ENSMUST00000187836.7	1862	14	144	2	-12	-2	multi-exon	FALSE	canonical	3	848	junction_13	52.2384156632446	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTCTCTGTGCTTTTTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	75293649	75285210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353
Isoform_88617_311	chr1	-	1602	15	FSM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	-31	0	17	0	multi-exon	FALSE	canonical	3	252	junction_14	185.094639334056	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293620	75285208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
Isoform_88618_87	chr1	-	1630	15	FSM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	-59	0	-11	0	multi-exon	FALSE	canonical	3	252	junction_14	185.094639334056	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293648	75285208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
Isoform_88622_249	chr1	-	1818	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	1	669	1	0	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294280	75285208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
Isoform_88623_529	chr1	-	1652	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	167	669	-23	0	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294114	75285208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
Isoform_88638_11	chr1	-	2669	4	FSM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000138683.2	2455	4	-214	0	-26	0	multi-exon	FALSE	canonical	1	2	junction_3	53.0722777603022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGTGGAAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	75455977	75451219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75452871_75453203_75453384_75453888_75454185_75455435
Isoform_88639_8	chr1	-	3054	5	FSM	ENSMUSG00000032997.17	ENSMUST00000094818.4	3065	5	11	0	11	0	multi-exon	FALSE	canonical	1	2	junction_3	56.2777709224521	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATGAGTGGAAACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	75455940	75451218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75454913_75455057_75455435
Isoform_88640_255	chr1	-	2947	4	FSM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000079205.14	2892	4	-61	6	-25	0	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATGAGTGGAAACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	75455976	75451218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
Isoform_88643_29	chr1	-	3093	4	FSM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000079205.14	2892	4	-206	5	-170	1	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGAGTGGAAACTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	75456121	75451217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
Isoform_88644_44	chr1	-	3039	4	FSM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000079205.14	2892	4	-153	6	-117	0	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATGAGTGGAAACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	75456068	75451218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
Isoform_88646_41	chr1	-	3420	9	FSM	ENSMUSG00000026211.19	ENSMUST00000113565.3	3379	9	-46	5	45	-4	multi-exon	FALSE	canonical	3	16	junction_1	8.70254991367473	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTCATGGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	75483051	75472984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
Isoform_88647_22	chr1	-	3487	9	FSM	ENSMUSG00000026211.19	ENSMUST00000113565.3	3379	9	-116	8	-25	-7	multi-exon	FALSE	canonical	3	16	junction_1	8.70254991367473	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAACCTCATGGTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	75483121	75472987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
Isoform_88649_26	chr1	-	3872	8	ISM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	-833	5805	-22	-2	5prime_fragment	FALSE	canonical	3	33	junction_3	4.13546137889432	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTCATGGTAAATAAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	75483118	75472982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
Isoform_88650_46	chr1	-	3791	8	ISM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	-748	5801	-28	1	5prime_fragment	FALSE	canonical	3	33	junction_3	4.13546137889432	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGGTAAATAAGTTCAAT	NA	False	NA	NA	False	AATAAA	-27	NA	75483033	75472978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
Isoform_88690_125	chr1	-	6320	18	FSM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	0	-5	0	1	multi-exon	TRUE	canonical	3	112	junction_15	30.5422731607683	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTTGTCTTTGTTCT	NA	False	NA	-2	True	AATAAA	-24	NA	77491716	77343820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
Isoform_88698_29	chr1	-	2034	18	FSM	ENSMUSG00000026245.17	ENSMUST00000170217.8	2036	18	3	-1	3	1	multi-exon	FALSE	canonical	3	22	junction_1	335.563627493931	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGCTCTGCTACTATC	NA	False	NA	NA	False	AATAAA	-19	NA	78465493	78394610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_78394860_78401829_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
Isoform_8870_45	chr10	+	3056	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	-120	1293	2	650	multi-exon	FALSE	canonical	3	32	junction_1	125.746658890892	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	4018	False	NA	NA	False	TATAAA	-19	NA	128641424	128654022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
Isoform_88706_44	chr1	-	1793	17	FSM	ENSMUSG00000026245.17	ENSMUST00000189529.7	1801	17	7	1	4	-1	multi-exon	FALSE	canonical	3	42	junction_15	338.950378927359	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTGCGTAGCTGCATT	NA	False	NA	-3	True	AATAAA	-18	NA	78465492	78401722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456651_78458944_78459001_78465421
Isoform_88708_1769	chr1	-	1892	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	42	17	4	0	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465492	78401721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
Isoform_88711_22	chr1	-	2133	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	41	-223	3	223	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAGGAAAATGTTTTC	NA	False	NA	NA	False	AATAAA	-2	NA	78465493	78401481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
Isoform_88724_703	chr1	-	4494	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	55	2	7	-2	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	703	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTAATTTTGTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	79739431	79679980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
Isoform_88733_110	chr1	-	2017	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	62	131	1	-131	multi-exon	FALSE	canonical	3	45	junction_4	6.12244844812923	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAACGTCTCGCTGGAC	NA	False	NA	-12	True	AATAAA	-7	NA	79836351	79772044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
Isoform_88734_9	chr1	-	2059	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	27	124	27	-124	multi-exon	FALSE	canonical	3	45	junction_4	6.12244844812923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCGCTGGACACCATTT	NA	False	NA	-5	True	AATAAA	-14	NA	79836386	79772037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
Isoform_88758_147	chr1	-	4232	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-209	686	-209	-686	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCGTCTTGGATTATA	NA	False	NA	-6	True	ATTAAA	-21	NA	80318406	80243325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
Isoform_88759_64	chr1	-	4911	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-204	2	-204	-2	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTCTTTATGTCAGTG	NA	False	NA	NA	False	AATAAA	-19	NA	80318401	80242641	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
Isoform_88764_332	chr1	-	3021	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-204	1892	-204	8	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTCAGTGTTGATGTA	NA	False	NA	-19	True	AATAAA	-22	NA	80318401	80244531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
Isoform_88766_15	chr1	-	3135	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-325	1899	-325	1	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCCAGGTCTTCAGTGT	NA	False	NA	-26	True	AATAAA	-15	NA	80318522	80244538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
Isoform_88772_35	chr1	-	2886	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-204	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCCAGGTCTTCAGTGT	NA	False	NA	-26	True	AATAAA	-15	NA	80318401	80244538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
Isoform_88778_3	chr1	-	2875	6	FSM	ENSMUSG00000038496.17	ENSMUST00000164473.2	1550	6	-49	-1276	-32	0	multi-exon	FALSE	canonical	2	2	junction_5	2.92574776766556	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTGGTTATTTCAT	NA	False	NA	NA	False	AATAAA	-12	NA	83016201	82990244	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_82991711_82992423_82992566_82997052_82997246_83000054_83000863_83003946_83004102_83016090
Isoform_88779_12	chr1	-	2682	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	-16	-2	-16	2	multi-exon	FALSE	canonical	3	48	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTATTTTTTTAA	424	False	NA	NA	False	AATAAA	-21	NA	84262382	84014014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84016229_84136952_84137100_84262061
Isoform_88780_15	chr1	-	2609	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	53	2	19	-2	multi-exon	FALSE	canonical	3	48	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAATTTTATTTATTTTT	493	False	NA	NA	False	AATAAA	-17	NA	84262313	84014018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84016229_84136952_84137100_84262061
Isoform_88782_31	chr1	-	2542	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	50	72	16	-72	multi-exon	FALSE	canonical	3	48	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATATGAACTTCCCTTT	490	False	NA	NA	False	AATAAA	-37	NA	84262316	84014088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84016229_84136952_84137100_84262061
Isoform_88783_3	chr1	-	2407	2	NIC	ENSMUSG00000045658.17	novel	2664	3	NA	NA	-4	-92	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCCAGGGCGTTTCACA	458	False	NA	NA	False	AATAAA	-17	NA	84262348	84014108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_84016229_84262061
Isoform_88784_6	chr1	-	2924	13	NIC	ENSMUSG00000036766.13	novel	3632	13	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	4.19242040936842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTTGTCTCATTCTT	NA	False	NA	-2	True	AATAAA	-16	NA	84618209	84347562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84618145
Isoform_88785_5	chr1	-	2991	13	NIC	ENSMUSG00000036766.13	novel	3632	13	NA	NA	-68	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	4.19242040936842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTGTCTCATTCTTTA	NA	False	NA	0	True	AATAAA	-18	NA	84618274	84347560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84618145
Isoform_88786_3	chr1	-	3604	13	FSM	ENSMUSG00000036766.13	ENSMUST00000049126.13	3632	13	25	3	25	-3	multi-exon	FALSE	canonical	1	6	junction_12	3.60169713082905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTTGTCTCATTCTT	NA	False	NA	-2	True	AATAAA	-16	NA	84673917	84347562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84673173
Isoform_88788_19	chr1	-	3273	13	FSM	ENSMUSG00000036766.13	ENSMUST00000049126.13	3632	13	359	0	157	0	multi-exon	FALSE	canonical	1	6	junction_12	3.60169713082905	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGTCTCATTCTTTAA	NA	False	NA	1	True	AATAAA	-19	NA	84673583	84347559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84673173
Isoform_8883_2238	chr10	+	893	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	29	-4	-9	-3	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	2238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATGTGTTTTATTA	NA	False	NA	NA	False	AATAAA	-10	NA	128657791	128713490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
Isoform_88832_13	chr1	-	6575	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-68	-42	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	245.45286716598	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7819	False	NA	-25	True	AATAAA	-17	NA	84817100	84702026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
Isoform_8886_53	chr10	+	829	10	NIC	ENSMUSG00000078427.4	novel	918	11	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	3	355	junction_8	1412.89957529774	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATGTGTTTTATTA	NA	False	NA	NA	False	AATAAA	-10	NA	128657786	128713490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128708289_128708380_128713201
Isoform_88872_13	chr1	-	6390	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	-42	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_25	267.718380895604	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7851	False	NA	-25	True	AATAAA	-17	NA	84817068	84702026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
Isoform_88877_20	chr1	-	6570	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-44	-41	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_25	239.116289700221	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	7843	False	NA	-24	True	AATAAA	-18	NA	84817076	84702025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
Isoform_8889_734	chr10	+	879	11	NIC	ENSMUSG00000078427.4	novel	953	12	NA	NA	-9	-7	combination_of_known_junctions	FALSE	canonical	3	1288	junction_2	1269.59119798461	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	128657791	128713479	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
Isoform_88908_10	chr1	-	6678	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-41	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	312.065920742539	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	NA	False	NA	-24	True	AATAAA	-18	NA	84827713	84702025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84822070_84822113_84827643
Isoform_88911_24	chr1	-	6696	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-47	-41	combination_of_known_junctions	FALSE	canonical	3	154	junction_39	264.060432396011	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	7840	False	NA	-24	True	AATAAA	-18	NA	84817079	84702025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
Isoform_88915_14	chr1	-	6556	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9522	-41	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_40	232.548382062744	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	NA	False	NA	-24	True	AATAAA	-18	NA	84827759	84702025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
Isoform_88919_10	chr1	-	6561	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9485	-41	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_41	270.908748968537	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	NA	False	NA	-24	True	AATAAA	-18	NA	84827722	84702025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
Isoform_8892_174	chr10	+	946	12	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1520.20222121546	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATGTGTTTTATTA	NA	False	NA	NA	False	AATAAA	-10	NA	128657791	128713490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
Isoform_88924_11	chr1	-	6567	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	213	-41	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_40	238.445264945647	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	8680	False	NA	-24	True	AATAAA	-18	NA	84816239	84702025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816112
Isoform_88928_173	chr1	-	6559	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-43	3116	-36	-41	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	7851	False	NA	-24	True	AATAAA	-18	NA	84817068	84702025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
Isoform_88930_17	chr1	-	8103	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-40	1569	-33	1506	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTGCTGACAGA	7854	False	NA	-8	True	ATTAAA	-21	NA	84817065	84700478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
Isoform_88931_10	chr1	-	9666	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-41	7	-34	-7	multi-exon	TRUE	canonical	3	439	junction_40	206.047323144466	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTTTTGTTACTTT	7853	False	NA	-15	True	AATAAA	-15	NA	84817066	84698916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
Isoform_88933_29	chr1	-	7367	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-11	2276	-4	799	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTTATAGTTCTG	7883	False	NA	-7	True	AATAAA	-16	NA	84817036	84701185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
Isoform_88937_10	chr1	-	6473	41	FSM	ENSMUSG00000026219.15	ENSMUST00000186465.7	9590	41	0	3117	0	-42	multi-exon	FALSE	canonical	3	29	junction_40	239.212613327558	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	6682	False	NA	-25	True	AATAAA	-17	NA	84818237	84702026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818203
Isoform_88945_39	chr1	-	6469	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	-41	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_39	236.698919191074	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	7854	False	NA	-24	True	AATAAA	-18	NA	84817065	84702025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
Isoform_8895_62	chr10	+	930	12	NNC	ENSMUSG00000078427.4	novel	953	12	NA	NA	-9	-9	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1539.19360662578	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGGAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	128657791	128713477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
Isoform_88957_3	chr1	-	5709	5	NIC	ENSMUSG00000026220.7	novel	3207	5	NA	NA	-82	2273	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	3.96074487943871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGGTCAGTGATGTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	84912937	84881345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_84885151_84889916_84890895_84900574_84900719_84907007_84907286_84912433
Isoform_88960_5	chr1	-	3693	5	FSM	ENSMUSG00000026220.7	ENSMUST00000027422.7	3207	5	35	-521	35	521	multi-exon	FALSE	canonical	2	5	junction_3	2.59807621135332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAGTTCTCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	84912820	84883097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84885151_84889916_84890895_84900574_84900719_84907007_84907286_84912580
Isoform_88961_3	chr1	-	3013	4	ISM	ENSMUSG00000026220.7	ENSMUST00000027422.7	3207	5	-72	5032	-72	-5032	5prime_fragment	FALSE	canonical	2	5	junction_2	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84912927	84888650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_84890895_84900574_84900719_84907007_84907286_84912580
Isoform_89005_9530	chr1	-	2399	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	38	5765	2	11	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	9530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTCCTAGAGGTTACAT	NA	False	NA	-17	True	AGTAAA	-27	NA	86287084	86278205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
Isoform_89006_273	chr1	-	3250	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	38	4914	2	862	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGATGTTTGGTTTTTT	NA	False	NA	-14	True	AATACA	-44	NA	86287084	86277354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
Isoform_8906_1010	chr10	+	880	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	185	-2	-38	2	multi-exon	FALSE	canonical	3	3700	junction_1	227.971623726484	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGATGGTCTCAGT	539	False	NA	30	True	ATTAAA	-22	NA	128745752	128748686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
Isoform_89061_253	chr1	-	1114	5	FSM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	24	21	-6	7	multi-exon	FALSE	canonical	3	312	junction_1	25.5391855782443	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGATGCTTCCATCTCCT	NA	False	NA	-4	True	ATTAAA	-22	NA	86510245	86470736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475250_86475340_86510021
Isoform_89063_7	chr1	-	1005	4	NIC	ENSMUSG00000026239.15	novel	1159	5	NA	NA	-6	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	164.641698511917	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCGATGCTTCCATCT	NA	False	NA	-7	True	ATTAAA	-19	NA	86510245	86470739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_86471306_86474378_86474505_86475250_86475340_86510021
Isoform_89064_16	chr1	-	2873	18	FSM	ENSMUSG00000026247.14	ENSMUST00000160810.2	2898	18	31	-6	31	-1	multi-exon	FALSE	canonical	2	4	junction_8	3.05089470115057	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGGCCTCCAGACAAG	6071	False	NA	NA	False	AATAAA	-18	NA	87083856	87075377	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_87075809_87075947_87076025_87076346_87076443_87076855_87076922_87077217_87077343_87077505_87077574_87078198_87078251_87078327_87078387_87078621_87078726_87078856_87078932_87079170_87079270_87079704_87079928_87080540_87080666_87080841_87080935_87081022_87081134_87081239_87081309_87081925_87082811_87083741
Isoform_89066_20	chr1	-	2721	13	FSM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	21	4	21	-4	multi-exon	FALSE	canonical	1	2	junction_2	3.91578004149024	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGAGGTAGAGACCT	NA	False	NA	NA	False	NA	NA	NA	87438063	87404559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
Isoform_89067_3	chr1	-	2476	12	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	17	1611	17	240	5prime_fragment	FALSE	canonical	1	2	junction_1	3.89107901073322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACAAAGGGTCCCTCC	NA	False	NA	NA	False	NA	NA	NA	87438067	87406166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
Isoform_89068_70	chr1	-	5306	32	FSM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-13	-1316	3	-6	multi-exon	FALSE	canonical	3	37	junction_30	6.87528260700014	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCAACTCTGTCATATA	NA	False	NA	-15	True	AATAAA	-18	NA	87936269	87872848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
Isoform_89069_3	chr1	-	5501	32	FSM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-13	-1511	3	187	multi-exon	FALSE	canonical	3	37	junction_30	6.87528260700014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAACTGGCTGTTGAGTA	NA	False	NA	NA	False	AATAAA	-26	NA	87936269	87872653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
Isoform_8907_1819	chr10	+	858	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	207	-2	-16	2	multi-exon	FALSE	canonical	3	3700	junction_1	227.971623726484	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGATGGTCTCAGT	561	False	NA	30	True	ATTAAA	-22	NA	128745774	128748686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
Isoform_89073_7	chr1	-	4258	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	15	-643	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	155.65807881379	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATGTCGGTCTGCCCTG	8682	False	NA	-20	True	AATAAA	-18	NA	88205264	88190835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88198877_88198992_88200450_88200488_88202763_88202820_88204940_88205008_88205095
Isoform_89079_233	chr1	-	4204	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	34	640	-20	-640	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8625	False	NA	-17	True	AATAAA	-21	NA	88205321	88190832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
Isoform_89087_10	chr1	-	4092	7	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-6	-639	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	161.869717846037	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCGGTCTGCCCTGCGGA	8639	False	NA	-16	True	AATAAA	-22	NA	88205307	88190831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88200450_88200488_88202763_88202819_88204940_88205008_88205095
Isoform_89092_33	chr1	-	4130	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	27	-642	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	112.85241099182	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTCGGTCTGCCCTGC	8618	False	NA	-19	True	AATAAA	-19	NA	88205328	88190834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
Isoform_89094_9	chr1	-	4091	6	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-25	-642	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	157.591116500899	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTCGGTCTGCCCTGC	8620	False	NA	-19	True	AATAAA	-19	NA	88205326	88190834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88202763_88202820_88204940_88205008_88205095
Isoform_89096_12	chr1	-	667	3	ISM	ENSMUSG00000044783.17	ENSMUST00000147393.2	2030	5	-97	9750	-24	-16	5prime_fragment	FALSE	canonical	3	259	junction_2	28.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAGAAAAAAAAAAAACAAT	8621	False	NA	NA	False	NA	NA	NA	88205325	88202449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_88202820_88204940_88205008_88205095
Isoform_89098_13	chr1	-	2729	2	FSM	ENSMUSG00000044783.17	ENSMUST00000126739.2	2780	2	40	11	18	-11	multi-exon	FALSE	canonical	3	259	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAATGCCTC	8685	False	NA	NA	False	NA	NA	NA	88205261	88202444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_88205008_88205095
Isoform_89099_10	chr1	-	2817	2	FSM	ENSMUSG00000044783.17	ENSMUST00000126739.2	2780	2	-48	11	6	-11	multi-exon	FALSE	canonical	3	259	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAATGCCTC	8597	False	NA	NA	False	NA	NA	NA	88205349	88202444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_88205008_88205095
Isoform_89100_249	chr1	-	2195	2	FSM	ENSMUSG00000034486.9	ENSMUST00000036954.9	2135	2	-65	5	-65	-5	multi-exon	FALSE	canonical	3	46	junction_1	0	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATAAGCTTAATCCT	NA	False	NA	NA	False	AATAAA	-15	NA	89858966	89855682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_89856866_89857954
Isoform_89108_14	chr1	-	2075	12	NNC	ENSMUSG00000026301.17	novel	3210	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	22.6412919060188	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTAATTTGGTCACTGG	NA	False	NA	-1	True	AATAAA	-20	NA	90017868	89969853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017643
Isoform_89109_105	chr1	-	2065	12	FSM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-2	-3	-2	0	multi-exon	FALSE	canonical	3	59	junction_8	12	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTAATTTGGTCACTGG	NA	False	NA	-1	True	AATAAA	-20	NA	90017868	89969853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
Isoform_89111_4	chr1	-	2106	12	NNC	ENSMUSG00000026301.17	novel	2060	12	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	23.8985458944215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGACTCAGTAATTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	90017868	89969859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017320_90017653
Isoform_89112_7	chr1	-	1344	10	ISM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-2	5525	-2	-5034	5prime_fragment	FALSE	canonical	3	59	junction_6	13.200261875442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGCTATGAAATAATAT	NA	False	NA	NA	False	NA	NA	NA	90017868	89975381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
Isoform_89113_4	chr1	-	1811	6	FSM	ENSMUSG00000026304.14	ENSMUST00000027529.12	1831	6	19	1	2	1	multi-exon	FALSE	canonical	1	2	junction_1	1.2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCATGAGGTTATATT	NA	False	NA	NA	False	ATTAAA	-17	NA	90897364	90885855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_90886722_90886889_90886984_90887723_90887850_90888832_90888985_90891865_90892026_90896951
Isoform_89114_10	chr1	-	1643	6	FSM	ENSMUSG00000026304.14	ENSMUST00000027529.12	1831	6	187	1	74	1	multi-exon	FALSE	canonical	1	2	junction_1	1.2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCATGAGGTTATATT	NA	False	NA	NA	False	ATTAAA	-17	NA	90897196	90885855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_90886722_90886889_90886984_90887723_90887850_90888832_90888985_90891865_90892026_90896951
Isoform_89115_78	chr1	-	1390	12	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	124.787157635487	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGACTGGTCCTGAG	NA	False	NA	-4	True	AATAAA	-22	NA	91326541	91303548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316169_91318328_91318386_91318853_91318920_91326372
Isoform_89116_489	chr1	-	1405	12	FSM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	-35	-2	-3	2	multi-exon	FALSE	canonical	3	426	junction_9	38.9197096809944	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAGTGACTGGTCCTG	NA	False	NA	-6	True	AATAAA	-20	NA	91326540	91303550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
Isoform_89117_9	chr1	-	1341	11	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-3	4	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	148.435305773256	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGACTGGTCCTGAG	NA	False	NA	-4	True	AATAAA	-22	NA	91326540	91303548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91326372
Isoform_89119_8	chr1	-	1401	12	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	140.659720690727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	False	NA	-8	True	AATAAA	-18	NA	91326548	91303552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318386_91318853_91318920_91326372
Isoform_89124_217	chr1	-	1329	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	2	4	2	-4	multi-exon	FALSE	canonical	3	93	junction_1	18.4932420089069	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATTGATGTGTCCAATG	NA	False	NA	-5	True	AATAAA	-31	NA	91340942	91339208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
Isoform_89125_3	chr1	-	1629	2	ISM	ENSMUSG00000067071.9	ENSMUST00000126136.8	1573	3	1	20	1	-20	intron_retention	FALSE	canonical	3	120	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCCTGGTGTACTGTC	NA	False	NA	-21	True	AATAAA	-15	NA	91340943	91339224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_91340525_91340614
Isoform_89126_41	chr1	-	1554	3	FSM	ENSMUSG00000067071.9	ENSMUST00000126136.8	1573	3	4	15	4	-15	multi-exon	FALSE	canonical	3	120	junction_1	9	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTGTACTGTCATTGA	NA	False	NA	-16	True	AATAAA	-20	NA	91340940	91339219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_91340525_91340614_91340702_91340778
Isoform_89127_25	chr1	-	4340	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	20.8533907392885	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6607	False	NA	NA	False	AAGAAA	-10	NA	92108010	91860478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
Isoform_89130_5	chr1	-	4090	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	27.7003460555574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACGAAAAAAAAAAAAAAAA	6597	False	NA	NA	False	AAGAAA	-6	NA	92108020	91860482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
Isoform_89131_3	chr1	-	8070	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	27.7003460555574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGCTACCTCCTTGT	6597	False	NA	-2	True	AATAAA	-21	NA	92108020	91856502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
Isoform_89133_16	chr1	-	4370	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	19	25	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_11	20.8533907392885	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6617	False	NA	NA	False	AAGAAA	-35	NA	92108000	91860453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
Isoform_89134_3	chr1	-	4926	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-5	557	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_11	20.8533907392885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTCCACTGTATTCCAA	6593	False	NA	NA	False	NA	NA	NA	92108024	91859921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
Isoform_89136_6	chr1	-	4095	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_26	27.7003460555574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACGAAAAAAAAAAAAAAAA	6607	False	NA	NA	False	AAGAAA	-6	NA	92108010	91860482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
Isoform_89137_11	chr1	-	4318	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	23.5064198709189	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6614	False	NA	NA	False	AAGAAA	-10	NA	92108003	91860478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
Isoform_89139_9	chr1	-	4075	27	FSM	ENSMUSG00000026313.17	ENSMUST00000097644.9	8100	27	43	3982	-1	-4	multi-exon	FALSE	canonical	3	12	junction_26	29.6698799314714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACGAAAAAAAAAAAAAAAA	6597	False	NA	NA	False	AAGAAA	-6	NA	92108020	91860482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
Isoform_89140_10	chr1	-	4366	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	8	25	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	23.5064198709189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6606	False	NA	NA	False	AAGAAA	-35	NA	92108011	91860453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
Isoform_89141_3	chr1	-	8318	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	23.5064198709189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTACCTCCTTGTGT	6607	False	NA	0	True	AATAAA	-23	NA	92108010	91856500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
Isoform_89142_8	chr1	-	4395	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	23.5064198709189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACGAAAAAAAAAAAAAAAA	6548	False	NA	NA	False	AAGAAA	-6	NA	92108069	91860482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
Isoform_89143_3	chr1	-	8076	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_26	29.6698799314714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	6592	False	NA	-1	True	AATAAA	-22	NA	92108025	91856501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
Isoform_89149_911	chr1	-	1461	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	83	476	-10	-207	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401499	92367207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
Isoform_89152_163	chr1	-	1488	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	56	476	-37	-207	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401526	92367207	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
Isoform_89162_4	chr1	-	678	3	FSM	ENSMUSG00000073616.11	ENSMUST00000148508.2	649	3	-41	12	21	-12	multi-exon	FALSE	canonical	3	39	junction_2	285.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92569686	92564878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_92565126_92567408_92567482_92569328
Isoform_89163_5	chr1	-	470	4	NNC	ENSMUSG00000073616.11	novel	649	3	NA	NA	21	-12	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	277.022662530623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92569686	92564878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_92565126_92567408_92567482_92569328_92569394_92569601
Isoform_89164_236	chr1	-	389	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	37	12	-25	-12	multi-exon	FALSE	canonical	3	610	junction_1	1	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92569670	92564878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_92565126_92567408_92567482_92569601
Isoform_89165_3	chr1	-	325	2	NIC	ENSMUSG00000073616.11	novel	438	3	NA	NA	29	-11	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATTTTAATTCCTGTGC	NA	False	NA	-30	True	AATAAA	-19	NA	92569678	92564877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_92565126_92569601
Isoform_89166_7	chr1	-	4194	14	NIC	ENSMUSG00000034212.15	novel	1809	3	NA	NA	13851	-33	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.0537589601968	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAATTA	NA	False	NA	NA	False	NA	NA	NA	92816777	92787557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_92789125_92798530_92798692_92799394_92799471_92804256_92804423_92804732_92804847_92806052_92806185_92807036_92807145_92808701_92808843_92809472_92809614_92811463_92811636_92812556_92812988_92813857_92814017_92814344_92814562_92816168
Isoform_89167_10	chr1	-	5416	47	FSM	ENSMUSG00000014602.16	ENSMUST00000171556.8	5391	47	-26	1	-26	-1	multi-exon	FALSE	canonical	0	0	junction_30	3.30127145123012	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTTGTGCGTGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	93029595	92946002	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993768_92993912_92994777_92994857_92996206_92996283_93000029_93000048_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93029484
Isoform_89169_7	chr1	-	1109	4	FSM	ENSMUSG00000026273.14	ENSMUST00000112944.8	3097	4	-21	2009	-5	-15	multi-exon	FALSE	canonical	3	13	junction_1	30.4448499567478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCAACCCTTCCAGGTT	NA	False	NA	-14	True	AATAAA	-24	NA	93233606	93228941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93229307_93230439_93230625_93232329_93232829_93233546
Isoform_89170_129	chr1	-	1307	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	46	13	-5	-13	multi-exon	FALSE	canonical	3	72	junction_3	7.36357401145817	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAACCCTTCCAGGTTGG	NA	False	NA	-12	True	AATAAA	-26	NA	93233591	93228939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
Isoform_89174_162	chr1	-	4721	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	2	1056	2	4	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAGTGTTTAAGTTCTC	NA	False	NA	-5	True	ATTAAA	-31	NA	93270509	93237555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
Isoform_89175_37	chr1	-	5070	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	43	666	43	394	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGTTTGT	NA	False	NA	-5	True	GATAAA	-17	NA	93270468	93237165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
Isoform_89177_41	chr1	-	4689	18	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	3	33	junction_17	48.1779429495616	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGAGTGTTTAAGTTCT	NA	False	NA	-6	True	ATTAAA	-30	NA	93271218	93237556	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
Isoform_89178_10	chr1	-	5075	18	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-9	394	combination_of_known_junctions	FALSE	canonical	3	33	junction_17	48.1779429495616	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGTTTGT	NA	False	NA	-5	True	GATAAA	-17	NA	93271213	93237165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
Isoform_89179_4	chr1	-	5814	18	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-14	60	combination_of_known_junctions	FALSE	canonical	3	33	junction_17	48.1779429495616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTATGAGTGTTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	93271218	93236431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
Isoform_8923_53	chr10	+	8387	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	512	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_4	94.4797988882236	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGATTGCATGTTTCT	NA	False	NA	-1	True	AATAAA	-19	NA	127932760	127965171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
Isoform_8924_14	chr10	+	8391	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	500	-5	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_4	106.070514666578	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127932748	127965166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
Isoform_89240_67	chr1	-	4386	28	FSM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	37	4	0	-4	multi-exon	FALSE	canonical	3	54	junction_27	104.811974833924	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGTTTGCCCTCTTCCT	NA	False	NA	NA	False	AATAAA	-23	NA	93373371	93335487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
Isoform_89241_19	chr1	-	6212	28	FSM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	37	-1822	0	0	multi-exon	FALSE	canonical	3	54	junction_27	104.811974833924	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93373371	93333661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
Isoform_89244_19	chr1	-	4480	28	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	3	31	junction_27	108.478339167721	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCAAAACGTTTGCCC	NA	False	NA	NA	False	AATAAA	-16	NA	93406099	93335494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93405928
Isoform_89247_316	chr1	-	4451	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-45	1825	-31	-3	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTGCCCTCTTCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	93406568	93335486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_89248_341	chr1	-	4420	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-14	1825	0	-3	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTGCCCTCTTCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	93406537	93335486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_89249_134	chr1	-	6245	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-14	0	0	0	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406537	93333661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_89250_28	chr1	-	4538	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-136	1829	-122	-7	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAACGTTTGCCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406659	93335490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_89251_120	chr1	-	6276	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-45	0	-31	0	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406568	93333661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_89263_455	chr1	-	2046	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	57	2146	-36	5	multi-exon	TRUE	canonical	3	133	junction_7	20.1461601451751	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGAGCCTGGCCAGAC	NA	False	NA	-31	True	AATAAA	-24	NA	93563387	93549618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
Isoform_89264_63	chr1	-	2127	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	-34	2156	-34	-5	multi-exon	FALSE	canonical	3	133	junction_7	20.1461601451751	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTCTGATGTACAGAGC	NA	False	NA	-41	True	AATAAA	-14	NA	93563478	93549628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
Isoform_89267_8	chr1	-	2852	11	FSM	ENSMUSG00000026277.15	ENSMUST00000151068.8	2821	11	-36	5	-36	-5	multi-exon	FALSE	canonical	3	161	junction_5	14.8354305633507	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTCTGATGTACAGAGC	NA	False	NA	-41	True	AATAAA	-14	NA	93563387	93549628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
Isoform_89273_631	chr1	-	2170	6	FSM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	-67	3455	17	0	multi-exon	FALSE	canonical	3	370	junction_4	24.3770383763081	631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTAGACTGTACAT	NA	False	NA	-1	True	AATAAA	-38	NA	93682569	93633111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
Isoform_89284_118	chr1	-	2976	5	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	10	-15	combination_of_known_junctions	FALSE	canonical	3	119	junction_3	852.002494127805	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2348	False	NA	-35	True	AATAAA	-9	NA	93729618	93720312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_93720666_93722447_93722646_93726101_93726193_93726497_93728633_93729419
Isoform_89286_1012	chr1	-	952	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	38	13	10	-13	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATATCTCACGAGCTT	2348	False	NA	-33	True	AATAAA	-11	NA	93729618	93720310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
Isoform_89288_99	chr1	-	1780	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	38	-815	10	815	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAGTCTCTCGTGAGAT	2348	False	NA	-16	True	NA	NA	NA	93729618	93719482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
Isoform_8929_167	chr10	+	8380	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	512	-4	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	79.9461553490976	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTCAAGATTGCATGT	NA	False	NA	-5	True	AATAAA	-15	NA	127932760	127965167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
Isoform_89291_91	chr1	-	3289	4	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	2	-15	intron_retention	FALSE	canonical	3	1366	junction_2	499.33845124213	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2340	False	NA	-35	True	AATAAA	-9	NA	93729626	93720312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_93720666_93722447_93722646_93726101_93728633_93729419
Isoform_89294_1074	chr1	-	623	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	0	432	0	-432	multi-exon	FALSE	canonical	3	2511	junction_1	0	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTTTTTGGTTTTGT	2338	False	NA	-8	True	ATTAAA	-14	NA	93729628	93728218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93728633_93729419
Isoform_89295_26	chr1	-	497	3	NNC	ENSMUSG00000026281.16	novel	1055	2	NA	NA	10	-527	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1255.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCGCCGTATTTGAGA	2348	False	NA	-103	True	GATAAA	-44	NA	93729618	93728313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_93728633_93729419_93729493_93729513
Isoform_89297_38	chr1	-	658	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	-35	432	-7	-432	multi-exon	FALSE	canonical	3	2511	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTTTTTGGTTTTGT	2303	False	NA	-8	True	ATTAAA	-14	NA	93729663	93728218	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_93728633_93729419
Isoform_8930_45	chr10	+	8382	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	512	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_26	93.9192214249097	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932760	127965172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
Isoform_89300_23	chr1	-	4868	13	FSM	ENSMUSG00000040693.8	ENSMUST00000071985.6	4908	13	39	1	39	-1	multi-exon	FALSE	canonical	0	0	junction_9	6.53781733880318	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTATTACTCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	96799857	96743995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_96746833_96748907_96749046_96751421_96751487_96756515_96756701_96759710_96759865_96764604_96764801_96765178_96765324_96766891_96767011_96768854_96768977_96770178_96770276_96772200_96772381_96795449_96795714_96799491
Isoform_89302_8	chr1	-	3216	3	FSM	ENSMUSG00000044768.17	ENSMUST00000153115.8	3495	3	277	2	277	-2	multi-exon	FALSE	canonical	0	0	junction_2	30	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTGTTTCGTGGTGTTT	NA	False	NA	-3	True	AATAAA	-16	NA	97589124	97571629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_97574087_97582324_97582415_97588455
Isoform_89303_7	chr1	-	2682	3	FSM	ENSMUSG00000044768.17	ENSMUST00000142234.2	639	3	-17	-2026	-17	-6	multi-exon	FALSE	canonical	1	1	junction_2	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCATTGTTTCGTGGT	NA	False	NA	-7	True	AATAAA	-12	NA	97589418	97571633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_97574087_97582324_97582415_97589279
Isoform_89305_54	chr1	-	2718	3	FSM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	77	37583	77	2	multi-exon	FALSE	canonical	3	49	junction_2	5.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCGTGGTGTTTTAAA	NA	False	NA	1	True	AATAAA	-20	NA	97589722	97571625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_97574087_97582324_97582415_97589555
Isoform_89308_6	chr1	-	2614	2	FSM	ENSMUSG00000044768.17	ENSMUST00000149927.2	2703	2	89	0	89	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCGTGGTGTTTTA	NA	False	NA	-1	True	AATAAA	-18	NA	97589710	97571627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_97574087_97589555
Isoform_89309_18	chr1	-	5596	30	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	362	-107	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	69.3342384617281	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAATTTAAAGCATTTTA	9196	False	NA	-29	True	ATTAAA	-23	NA	97697774	97633879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89311_7	chr1	-	5562	29	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	382	-112	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	65.6063068614596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTTGAATTTAAAGCA	9216	False	NA	-34	True	ATTAAA	-18	NA	97697754	97633884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97648830_97649005_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89315_81	chr1	-	5408	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	382	92	382	-92	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTGTTCTTTCTT	9216	False	NA	-14	True	ATTAAA	-38	NA	97697754	97633864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89316_8	chr1	-	5527	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	362	-7	362	7	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAGTGTATTGTCCTCTG	9196	False	NA	85	True	AATAAA	-22	NA	97697774	97633765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89318_3	chr1	-	5284	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	329	269	329	-269	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGAATGTAAATGGATTA	9163	False	NA	NA	False	AATAAA	-19	NA	97697807	97634041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89320_5	chr1	-	4954	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	334	594	334	-594	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTCTTTCTCCCTGA	9168	False	NA	NA	False	AATAAA	-16	NA	97697802	97634366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89322_28	chr1	-	5386	28	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	382	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	53.5000737150627	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGAATTTAAAGCAT	9216	False	NA	-33	True	ATTAAA	-19	NA	97697754	97633883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89324_4	chr1	-	5553	28	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	338	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	53.5000737150627	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTGTCCTCTGCCTTA	9172	False	NA	90	True	AATAAA	-27	NA	97697798	97633760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89325_3	chr1	-	3866	28	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	352	-1508	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	71.5843244061566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATTTTAAAGATGTAAAC	9186	False	NA	NA	False	AATAAA	-19	NA	97697784	97640666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89326_6	chr1	-	3718	26	ISM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	320	6891	320	-1505	5prime_fragment	FALSE	canonical	0	0	junction_14	46.9395526182344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAGATGTAAACGCA	9154	False	NA	NA	False	AATAAA	-22	NA	97697816	97640663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_89328_3	chr1	-	4098	26	FSM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	-5	2	-5	-1	multi-exon	FALSE	canonical	1	3	junction_12	6.89301095313216	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGTCAGAGTGTATTTT	NA	False	NA	-8	True	AATAAA	-16	NA	98023351	97748820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
Isoform_89329_23	chr1	-	3785	25	NIC	ENSMUSG00000026335.17	novel	4102	26	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	1	5	junction_2	5.09884927105017	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCAGAGTGTATTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	98023355	97748819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
Isoform_8933_28	chr10	+	3436	16	Fusion	ENSMUSG00000020250.12_ENSMUSG00000056821.14	novel	894	3	NA	NA	-52	0	multi-exon	FALSE	canonical	1	19	junction_2	295.750540527354	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82647904	82733546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr10_+_82647970_82654864_82654958_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_89332_43	chr1	-	6768	31	FSM	ENSMUSG00000056536.15	ENSMUST00000186485.7	6759	31	-9	0	1	0	multi-exon	TRUE	canonical	3	42	junction_6	10.8119789534057	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTCTTGTGATAAGA	NA	False	NA	-5	True	AATAAA	-15	NA	105591396	105446150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
Isoform_89334_8	chr1	-	6629	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_28	13.8006014103214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTGTGATAAGACATT	NA	False	NA	-1	True	AATAAA	-19	NA	105591373	105446146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
Isoform_89336_6	chr1	-	6305	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	1	-343	combination_of_known_junctions	FALSE	canonical	3	20	junction_28	13.8006014103214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAGGTTTAAAGGTGCA	NA	False	NA	NA	False	AATAAA	-37	NA	105591396	105446493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
Isoform_89338_217	chr1	-	2031	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	46	3441	2	-3441	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTCTTACTCTCAGAG	8307	False	NA	NA	False	AATAAA	-14	NA	106687411	106651629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
Isoform_8934_103	chr10	+	3370	15	Fusion	ENSMUSG00000020250.12_ENSMUSG00000056821.14	novel	894	3	NA	NA	-61	0	multi-exon	FALSE	canonical	1	47	junction_2	264.185193238627	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82647895	82733546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr10_+_82647970_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_89348_8	chr1	-	5027	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	35	456	7	-456	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATATGCAAATAGATTT	8296	False	NA	NA	False	AATAAA	-19	NA	106687422	106648644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
Isoform_8935_17	chr10	+	2180	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-87	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.89112761149	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGTCTTGTGTATGAA	NA	False	NA	37	True	NA	NA	NA	75399894	75422035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75399964_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_89351_5	chr1	-	5437	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	63	18	19	-18	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCATTTTGGAAGCATC	8324	False	NA	-3	True	TATAAA	-15	NA	106687394	106648206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
Isoform_89357_130	chr1	-	2869	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	36	1728	-25	-1728	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGGCTTTTATATGTT	60	False	NA	-2	True	AGTAAA	-13	NA	106724422	106698887	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
Isoform_89358_626	chr1	-	2803	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	103	1727	42	-1727	multi-exon	TRUE	canonical	3	455	junction_4	35.0793386482699	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTTTTATATGTTT	127	False	NA	-1	True	AGTAAA	-14	NA	106724355	106698886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
Isoform_8937_11	chr10	+	2127	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.650286311549	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTTAGTGTCTTGTGT	NA	False	NA	32	True	NA	NA	NA	75399939	75422030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75399964_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_89378_10	chr1	-	5570	3	NIC	ENSMUSG00000038702.7	novel	622	2	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	7	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTACGTTGTATAGTG	NA	False	NA	NA	False	AATAAA	-11	NA	111792626	111786438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_111791371_111791824_111791962_111792125
Isoform_8939_24	chr10	+	2154	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-86	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.022531898245	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTTTAGTGTCTTG	NA	False	NA	29	True	NA	NA	NA	75399895	75422027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75399964_75400671_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_8940_11	chr10	+	2135	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-70	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.488795025849	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTTTAGTGTCTTG	NA	False	NA	29	True	NA	NA	NA	75399911	75422027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75399964_75400671_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_89400_262	chr1	-	3085	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	236	3742	56	1130	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTAGTGTGCTGCTGTTT	NA	False	NA	-7	True	AATAAA	-21	NA	118238910	118226249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
Isoform_89403_26	chr1	-	3121	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	201	3741	21	1131	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGTGTGCTGCTGTTTG	NA	False	NA	-6	True	AATAAA	-22	NA	118238945	118226248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
Isoform_89405_17	chr1	-	3224	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	97	3742	-83	1130	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTAGTGTGCTGCTGTTT	NA	False	NA	-7	True	AATAAA	-21	NA	118239049	118226249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
Isoform_8941_33	chr10	+	3042	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	10	-977	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	165.410663199202	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGTAGTATGTGAATGT	NA	False	NA	9	True	AATAAA	-22	NA	52293652	52315302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_52293689_52305288_52305415_52306162_52306313_52309440_52309541_52312672
Isoform_89415_54	chr1	-	6719	14	FSM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	-84	2	-84	-2	multi-exon	FALSE	canonical	3	89	junction_11	11.3908506833309	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATCTTGTTGATCTGC	1145	False	NA	-5	True	ATTAAA	-15	NA	118981433	118761863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
Isoform_89419_3	chr1	-	6820	14	FSM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	-184	1	-184	-1	multi-exon	FALSE	canonical	3	89	junction_11	11.3908506833309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATCTTGTTGATCTGCT	1045	False	NA	-4	True	ATTAAA	-16	NA	118981533	118761862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
Isoform_8942_36	chr10	+	1838	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	10	-2181	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	165.410663199202	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATTTTGGTCCAGTC	NA	False	NA	7	True	AATAAA	-8	NA	52293652	52314098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_52293689_52305288_52305415_52306162_52306313_52309440_52309541_52312672
Isoform_89420_4	chr1	-	6617	13	NIC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-88	-2	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	30.4743744808651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATCTTGTTGATCTGC	1141	False	NA	-5	True	ATTAAA	-15	NA	118981437	118761863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118929769_118929937_118981031
Isoform_89421_5	chr1	-	6496	13	NIC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	32	-3	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	30.4743744808651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTATCTTGTTGATCTG	1261	False	NA	-6	True	ATTAAA	-14	NA	118981317	118761864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118929769_118929937_118981031
Isoform_89422_97	chr1	-	3131	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	1126	-2	1126	2	multi-exon	FALSE	canonical	3	45	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCCTTGTGTGATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	119348852	119343192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119345828_119348356
Isoform_89429_8	chr1	-	4375	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	-118	-2	-118	2	multi-exon	FALSE	canonical	3	45	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCCTTGTGTGATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	119350096	119343192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119345828_119348356
Isoform_89438_65	chr1	-	2129	5	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	216	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	456.372312372256	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCGCCCTTTTTCCTG	NA	False	NA	-7	True	AATAAA	-18	NA	119432308	119398037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432247
Isoform_89447_3111	chr1	-	2114	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	170	5	170	-5	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	3111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGATTTCGCCCTTTTTCC	NA	False	NA	-9	True	AATAAA	-16	NA	119432354	119398039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
Isoform_89448_1745	chr1	-	2218	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	69	2	69	-2	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCGCCCTTTTTCCTGC	NA	False	NA	-6	True	AATAAA	-19	NA	119432455	119398036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
Isoform_89449_479	chr1	-	2276	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	10	3	10	-3	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCGCCCTTTTTCCTG	NA	False	NA	-7	True	AATAAA	-18	NA	119432514	119398037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
Isoform_8945_43	chr10	+	4046	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14814	0	intron_retention	TRUE	canonical	3	44	junction_1	79.0900236054462	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25259742	25399411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_25259800_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_89459_3	chr1	-	6513	25	NIC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-6	9	combination_of_known_junctions	FALSE	canonical	2	7	junction_24	18.7778959151445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTGTTTCTTGAGC	NA	False	NA	-2	True	AATAAA	-22	NA	119576360	119472757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576146
Isoform_89465_49	chr1	-	6460	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-13	-5	-13	5	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATGAGCTGTTTCTT	NA	False	NA	-6	True	AATAAA	-18	NA	119576679	119472761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
Isoform_8947_68	chr10	+	609	4	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	409	junction_1	3639.28063709788	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6367	False	NA	30	True	AATAAA	-21	NA	80128311	80129948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_80128452_80128608_80128695_80129475_80129711_80129800
Isoform_89470_8	chr1	-	5923	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-13	-529	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	19.1973938480085	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGCTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	119576679	119473295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_119476926_119477616_119477745_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
Isoform_89473_6	chr1	-	10795	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	77	2	77	-2	multi-exon	TRUE	canonical	3	29	junction_24	12.095832819514	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTCGTTTCAAGGTT	NA	False	NA	-2	True	AATAAA	-19	NA	119765266	119580198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
Isoform_89474_60	chr1	-	3287	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	41	13	41	-13	multi-exon	FALSE	canonical	3	113	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATCCAG	NA	False	NA	NA	False	AATAAA	-8	NA	119840897	119835632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119838885_119840862
Isoform_89475_161	chr1	-	1478	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	41	1822	41	-1822	multi-exon	FALSE	canonical	3	113	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTCTCTGAATTCCAG	NA	False	NA	-12	True	AATAAA	-16	NA	119840897	119837441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119838885_119840862
Isoform_89476_36	chr1	-	865	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	294	152	294	-152	multi-exon	FALSE	canonical	3	40	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAGGAGAGTATCCTAA	NA	False	NA	NA	False	ATTAAA	-13	NA	120001510	119995258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_119996055_120001441
Isoform_89478_559	chr1	-	544	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	15	10	15	0	multi-exon	FALSE	canonical	3	2709	junction_1	24.2532930181083	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGTTACTCTGTTGT	NA	False	NA	-11	True	ATTAAA	-19	NA	120048793	120041019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
Isoform_89481_126	chr1	-	2767	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	-2	-13	-2	13	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTCCTTTGTTTATTA	NA	False	NA	-8	True	NA	NA	NA	120193016	120154139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
Isoform_89484_28	chr1	-	2835	5	ISM	ENSMUSG00000026389.17	ENSMUST00000112643.2	2873	6	2463	-248	181	18	3prime_fragment	FALSE	canonical	3	10	junction_4	16.3554272337961	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTTATTATTCTT	NA	False	NA	-3	True	NA	NA	NA	120197972	120154134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197854
Isoform_89485_4	chr1	-	3043	5	ISM	ENSMUSG00000026389.17	ENSMUST00000112643.2	2873	6	2245	-238	-37	8	3prime_fragment	FALSE	canonical	3	10	junction_4	16.3554272337961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAAATTGTCCTTTGTT	NA	False	NA	-13	True	NA	NA	NA	120198190	120154144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197854
Isoform_89486_13	chr1	-	2358	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	70.4346505634833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	-1	True	ATTAAA	-17	NA	121255481	121232081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247635_121255419
Isoform_89487_4	chr1	-	2547	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	77.0817747590181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTTAGTCCTTTTTA	NA	False	NA	-4	True	ATTAAA	-14	NA	121255481	121232084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255294
Isoform_89488_272	chr1	-	2423	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	271	3	-7	-3	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTTAGTCCTTTTTA	NA	False	NA	-4	True	ATTAAA	-14	NA	121255482	121232084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
Isoform_8949_4	chr10	+	5007	4	Genic_Genomic	ENSMUSG00000112790.2	novel	2758	1	NA	NA	-17486	-2	multi-exon	FALSE	canonical	3	45	junction_1	10.7806410858642	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTTAGTCAGGGTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	81832820	81853062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_81832952_81847436_81847564_81847762_81847824_81848374
Isoform_89492_8	chr1	-	2517	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	231	-51	0	51	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGTTTTACTGCTGT	NA	False	NA	50	True	GATAAA	-24	NA	121255522	121232030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
Isoform_89493_16	chr1	-	2397	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	72.0316597059932	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTAGTCCTTTTTATT	NA	False	NA	-2	True	ATTAAA	-16	NA	121255486	121232082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247357_121247702_121255419
Isoform_8951_7	chr10	+	1206	5	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	385	-1786	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	44.144648599802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTATCATTTATAGTAA	NA	False	NA	4	True	ATTAAA	-17	NA	103204088	103231233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_103204182_103224757_103225203_103229251_103229410_103229761_103229889_103230850
Isoform_89511_1332	chr1	-	2206	13	FSM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	48	4	48	-4	multi-exon	FALSE	canonical	3	390	junction_12	122.318232492135	1332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTTTATACCTTT	NA	False	NA	-20	True	CATAAA	-19	NA	121495670	121481567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
Isoform_8952_9	chr10	+	3427	12	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	376	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	34.3374118308248	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAGTTCGTGTCCCTCA	NA	False	NA	NA	False	AATAAA	-13	NA	103204079	103255234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_103204182_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
Isoform_8953_5	chr10	+	1078	5	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	381	-1788	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	41.1969355656461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAGTATCATTTATAGT	NA	False	NA	2	True	ATTAAA	-15	NA	103204084	103231231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850
Isoform_89531_2239	chr1	-	2716	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	-155	4	5	-4	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	2239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGATGGTTTTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	125363439	125320646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
Isoform_89539_592	chr1	-	2528	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	25	1	5	0	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	False	NA	-4	True	AATAAA	-20	NA	125363439	125320642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
Isoform_8954_18	chr10	+	3295	12	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	382	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	33.5120553120764	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103204085	103255238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
Isoform_89542_63	chr1	-	2545	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	3	6	3	-5	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCCTGATGGTTTTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	125363461	125320647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
Isoform_89544_455	chr1	-	2522	13	NIC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	705.897183259243	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	-7	True	AATAAA	-17	NA	125363439	125320645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363389
Isoform_8955_24	chr10	+	1922	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4110	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80977896	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_80978088_80979795_80981052_80983803
Isoform_89550_5	chr1	-	4344	22	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	1	-6	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_7	55.8756312519192	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTTTAAATTATGG	NA	False	NA	-11	True	AATAAA	-16	NA	128030198	127881926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127898116_127898258_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
Isoform_89551_5	chr1	-	4246	22	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	3	-102	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	55.8756312519192	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCTCCTGG	NA	False	NA	-6	True	TATAAA	-17	NA	128030196	127882022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127898116_127898258_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
Isoform_89559_17	chr1	-	4018	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_20	44.9244922063678	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTTTAAATTATGG	NA	False	NA	-11	True	AATAAA	-16	NA	128030767	127881926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128030743
Isoform_8956_10	chr10	+	2016	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4016	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80977802	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_80978088_80979795_80981052_80983803
Isoform_89561_6	chr1	-	4819	21	FSM	ENSMUSG00000036086.17	ENSMUST00000112538.4	4741	21	306	-384	-232	-102	multi-exon	FALSE	canonical	3	13	junction_20	44.0595903294618	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCTCCTGG	NA	False	NA	-6	True	TATAAA	-17	NA	128030432	127882022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029511
Isoform_89565_7	chr1	-	4671	21	FSM	ENSMUSG00000036086.17	ENSMUST00000112538.4	4741	21	549	-479	2	-7	multi-exon	FALSE	canonical	3	13	junction_20	44.0595903294618	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030189	127881927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029511
Isoform_89567_161	chr1	-	4203	21	FSM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	1	6	1	-6	multi-exon	FALSE	canonical	3	115	junction_3	27.0654761642946	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTTTAAATTATGG	NA	False	NA	-11	True	AATAAA	-16	NA	128030198	127881926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
Isoform_89568_6	chr1	-	4441	21	FSM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	-238	7	-237	-7	multi-exon	FALSE	canonical	3	115	junction_3	27.0654761642946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030437	127881927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
Isoform_89569_5	chr1	-	3978	21	NIC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	0	-102	combination_of_known_junctions	FALSE	canonical	1	6	junction_20	45.2731708631061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCTCCTGG	NA	False	NA	-6	True	TATAAA	-17	NA	128030784	127882022	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128030704
Isoform_89571_11	chr1	-	4082	20	NIC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	2	-99	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	45.8399600682436	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTTGTCTCCTGGTCC	NA	False	NA	-3	True	TATAAA	-20	NA	128030189	127882019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019579_128019748_128029989
Isoform_89572_8	chr1	-	4187	20	NIC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	45.8399600682436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030202	127881927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019579_128019748_128029989
Isoform_89579_21	chr1	-	2039	13	NIC	ENSMUSG00000036086.17	novel	1913	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	50.1305933426774	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATATGTGTGATTGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	128030195	127914846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_127915137_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
Isoform_8959_20	chr10	+	2351	7	NNC	ENSMUSG00000035873.9	novel	870	5	NA	NA	186	608	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	264.853838098593	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTTTGTGTCGTGTTT	5784	False	NA	31	True	AATAAA	-33	NA	108168167	108250709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_108168294_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
Isoform_8961_20	chr10	+	1260	2	Genic_Genomic	ENSMUSG00000091552.3	novel	883	1	NA	NA	-6095	285	multi-exon	FALSE	canonical	2	11	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACAAGTATTCTAGAG	NA	False	NA	NA	False	AATAAA	-12	NA	100186001	100193264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_100186070_100192072
Isoform_89613_4159	chr1	-	2928	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	-18	0	-18	0	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	4159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287419	128259326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
Isoform_89614_8770	chr1	-	2900	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	10	0	-7	0	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	8770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287391	128259326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
Isoform_8963_13	chr10	+	4861	2	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-6968	-415	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTCTGTCTTTTTTT	7914	False	NA	14	True	AATAAA	-16	NA	75861515	75878653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75861791_75874067
Isoform_8965_6	chr10	+	5005	2	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-6961	-264	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATCTTATTTATTA	7921	False	NA	17	True	AATAAA	-25	NA	75861522	75878804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_75861791_75874067
Isoform_89653_4890	chr1	-	2140	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	35	0	35	0	multi-exon	TRUE	canonical	3	1712	junction_8	135.919976456737	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	-4	True	AATAAA	-14	NA	128345061	128291443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
Isoform_89654_85	chr1	-	2215	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	-40	0	-31	0	multi-exon	FALSE	canonical	3	1712	junction_8	135.919976456737	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	-4	True	AATAAA	-14	NA	128345136	128291443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
Isoform_89667_17	chr1	-	2739	10	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-25	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	18.9912260443255	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTCCTGTAATATT	NA	False	NA	NA	False	NA	NA	NA	130390213	130366761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
Isoform_89670_31	chr1	-	2466	10	FSM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	47	20	34	-20	multi-exon	FALSE	canonical	3	38	junction_3	13.0705587551887	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAGAAATAAATAAATA	NA	False	NA	NA	False	TTTAAA	-25	NA	130390434	130366783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
Isoform_89672_4	chr1	-	1364	10	FSM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	-9	1178	-9	-51	multi-exon	FALSE	canonical	3	38	junction_3	13.0705587551887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTGTCATTGTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	130390490	130367941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
Isoform_89675_7	chr1	-	3469	10	NNC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	34	-1	intron_retention	FALSE	non_canonical	3	34	junction_1	13.9761701954911	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTGTCTCCTGTAAT	NA	False	NA	NA	False	TTTAAA	-44	NA	130390434	130366764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_130367260_130367283_130368117_130375355_130375377_130376064_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
Isoform_89677_15	chr1	-	2432	10	NNC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	0	17	at_least_one_novel_splicesite	TRUE	non_canonical	2	9	junction_3	22.1058061754523	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGAAATTTCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	130390468	130366746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_130367260_130367283_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
Isoform_89678_5	chr1	-	2116	9	ISM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	13	7643	0	-9	5prime_fragment	FALSE	canonical	3	38	junction_2	13.7244080018047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAAAACATCTCCTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	130390468	130374406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
Isoform_89679_4	chr1	-	3096	8	FSM	ENSMUSG00000026399.13	ENSMUST00000140725.8	3133	8	31	6	31	-6	multi-exon	FALSE	canonical	3	50	junction_7	10.5926428068095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACATCTCCTGATTGA	NA	False	NA	NA	False	AATAAA	-18	NA	130390437	130374403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_130375377_130376064_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
Isoform_8968_9	chr10	+	1539	3	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	5.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGGCTGCATTCACAA	NA	False	NA	NA	False	NA	NA	NA	61751902	61759355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_61752029_61757919_61759238_61759260
Isoform_89680_4	chr1	-	2255	8	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-25	-6	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	27.0630405399191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACATCTCCTGATTGA	NA	False	NA	NA	False	AATAAA	-18	NA	130390213	130374403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
Isoform_89681_4	chr1	-	3665	16	NNC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	6.66199836552233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTACAATGAAATTTTC	3887	False	NA	NA	False	AATAAA	-20	NA	130643583	130616925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_130618886_130625619_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
Isoform_89682_9	chr1	-	3614	16	NIC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	6.66199836552233	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAAATTTTCAATTCA	3921	False	NA	NA	False	AATAAA	-26	NA	130643549	130616919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_130618886_130625642_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
Isoform_89683_9	chr1	-	3469	15	NIC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	7.01492577818678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGAAATTTTCAATTCAC	3887	False	NA	NA	False	AATAAA	-27	NA	130643583	130616918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_130618886_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
Isoform_89684_3	chr1	-	1942	15	FSM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	-69	976	-33	50	multi-exon	FALSE	canonical	3	18	junction_5	4.50679758695639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCATAGACTTGGTTCT	3886	False	NA	NA	False	NA	NA	NA	130643584	130625383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
Isoform_89686_5	chr1	-	2896	11	NNC	ENSMUSG00000016528.11	novel	2854	10	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	48.6994866502718	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTTCATTCTTTTT	NA	False	NA	-18	True	ACTAAA	-15	NA	131025575	130981440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_130990244_130990279_131025025
Isoform_89687_206	chr1	-	2857	10	FSM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	-7	4	-7	-4	multi-exon	FALSE	canonical	3	81	junction_6	17.0105268787113	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTTCATTCTTTTT	NA	False	NA	-18	True	ACTAAA	-15	NA	131025570	130981440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
Isoform_89693_676	chr1	-	2127	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	51	986	-44	-986	multi-exon	FALSE	canonical	3	221	junction_1	9	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTGTTTTCATTCTCA	288	False	NA	-3	True	ATTAAA	-19	NA	131066026	131056177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_131057983_131063996_131064109_131065816
Isoform_89696_16	chr1	-	2805	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	69	290	-26	-290	multi-exon	FALSE	canonical	3	221	junction_1	9	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTAAGCCGTGGCCGCAG	306	False	NA	-5	True	NA	NA	NA	131066008	131055481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_131057983_131063996_131064109_131065816
Isoform_8970_15	chr10	+	1300	7	NNC	ENSMUSG00000078452.11	novel	1271	7	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	16.5672032106274	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGTGCTCCAGAAGTT	NA	False	NA	NA	False	AATAAA	-14	NA	22237784	22250037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_22237831_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
Isoform_89702_3	chr1	-	3403	6	FSM	ENSMUSG00000026430.17	ENSMUST00000027688.15	3485	6	73	9	73	-9	multi-exon	FALSE	canonical	0	0	junction_3	1.01980390271856	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACAAGTCACGATGGA	NA	False	NA	NA	False	AATAAA	-10	NA	131172922	131104155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_131106415_131108289_131108406_131108890_131109189_131109880_131109992_131139993_131140116_131172425
Isoform_89703_4	chr1	-	1594	10	NNC	ENSMUSG00000042349.14	novel	2867	21	NA	NA	1596	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.63279638028292	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCAGCTATGGTACCT	3524	False	NA	NA	False	AATAAA	-19	NA	131196685	131182338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_131183076_131184623_131184696_131184853_131184961_131185637_131185735_131186918_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131196515
Isoform_89705_15	chr1	-	2641	18	ISM	ENSMUSG00000042349.14	ENSMUST00000161764.8	2867	21	1660	0	1422	0	3prime_fragment	FALSE	canonical	1	1	junction_15	6.08759587435071	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCAGCTATGGTACCT	NA	False	NA	NA	False	AATAAA	-19	NA	131203028	131182338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_131183076_131184623_131184696_131184853_131184961_131185637_131185735_131186918_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131197537_131197625_131197754_131197847_131197922_131197988_131198623_131198821_131199499_131199680_131199844_131199956_131201107_131201269_131201377_131201560_131202886
Isoform_89707_5	chr1	-	6883	24	NIC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	2	-1241	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	36.103662974153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	NA	False	NA	-8	True	AATAAA	-18	NA	131455088	131214229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_131217479_131219333_131219429_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
Isoform_89712_69	chr1	-	6754	23	FSM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	31	1241	31	-1241	multi-exon	TRUE	canonical	3	89	junction_2	12.3013135091171	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	NA	False	NA	-8	True	AATAAA	-18	NA	131455054	131214229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
Isoform_89713_49	chr1	-	6795	23	FSM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	-12	1243	-7	-1243	multi-exon	FALSE	canonical	3	89	junction_2	12.3013135091171	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGCTGTACGTCACCTC	NA	False	NA	-10	True	AATAAA	-16	NA	131455097	131214231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
Isoform_89716_71	chr1	-	3531	22	FSM	ENSMUSG00000026425.16	ENSMUST00000186543.7	3533	22	1	1	1	0	multi-exon	FALSE	canonical	3	29	junction_1	23.367225143015	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGTTGCCAGATCTCTT	NA	False	NA	-1	True	AATAAA	-25	NA	131455084	131222956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_131223278_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
Isoform_89717_13	chr1	-	4289	21	ISM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	22	9969	22	-1	5prime_fragment	FALSE	canonical	3	115	junction_11	8.98943824718764	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGTTGCCAGATCTCT	NA	False	NA	-2	True	AATAAA	-24	NA	131455063	131222957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
Isoform_89719_4	chr1	-	2645	4	ISM	ENSMUSG00000059149.18	ENSMUST00000046658.10	3252	7	21364	1	-10	-1	3prime_fragment	FALSE	canonical	1	3	junction_3	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAAGTGTGTTATCCATC	NA	False	NA	-1	True	AATAAA	-13	NA	131974307	131964522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_131966712_131968277_131968399_131969595_131969667_131974043
Isoform_89720_4	chr1	-	2617	5	ISM	ENSMUSG00000059149.18	ENSMUST00000159038.8	1957	10	15446	-1730	1712	1	3prime_fragment	FALSE	canonical	1	3	junction_3	2.1650635094611	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTGTTATCCATCTT	NA	False	NA	1	True	AATAAA	-15	NA	131980203	131964520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_131966712_131968277_131968399_131969595_131969667_131974043_131974192_131980117
Isoform_89721_3	chr1	-	3010	7	NNC	ENSMUSG00000059149.18	novel	1285	9	NA	NA	-979	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	2.85287379477061	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAAGTGTGTTATCCATC	NA	False	NA	-1	True	AATAAA	-13	NA	131982894	131964522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_131966712_131968277_131968399_131969595_131969667_131974043_131974192_131980117_131980292_131981796_131981963_131982753
Isoform_89722_420	chr1	-	2933	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	1	1421	1	928	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTGAGCAGTCTCA	598	False	NA	-6	True	AATATA	-19	NA	132067421	132041395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
Isoform_89724_87	chr1	-	2980	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	-46	1421	-46	928	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTGAGCAGTCTCA	551	False	NA	-6	True	AATATA	-19	NA	132067468	132041395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
Isoform_8973_15	chr10	+	1976	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4089	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80977875	80984278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_80978121_80979795_80981052_80983803
Isoform_89730_13	chr1	-	3005	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	928	intron_retention	FALSE	canonical	1	1	junction_13	40.8059908455718	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTGAGCAGTCTCA	598	False	NA	-6	True	AATATA	-19	NA	132067421	132041395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049384_132049774_132049855_132050049_132050199_132067147
Isoform_89734_12	chr1	-	2891	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	0	928	intron_retention	FALSE	canonical	2	6	junction_3	40.998257802706	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTGAGCAGTCTCA	597	False	NA	-6	True	AATATA	-19	NA	132067422	132041395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
Isoform_89735_39	chr1	-	3884	5	FSM	ENSMUSG00000042066.17	ENSMUST00000045473.16	3410	5	-475	1	-475	0	multi-exon	FALSE	canonical	3	25	junction_4	2.38484800354236	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGAGGTCTGCTG	NA	False	NA	-1	True	AATAAA	-22	NA	132319494	132284053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308920_132318714
Isoform_89736_17	chr1	-	3949	5	FSM	ENSMUSG00000042066.17	ENSMUST00000045473.16	3410	5	-539	0	-539	0	multi-exon	FALSE	canonical	3	25	junction_4	2.38484800354236	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGAGGTCTGCTGA	NA	False	NA	0	True	AATAAA	-23	NA	132319558	132284052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308920_132318714
Isoform_89737_9	chr1	-	4696	25	NIC	ENSMUSG00000026442.15	novel	9739	30	NA	NA	-17	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	7.54143646057493	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTATCTGTCCTTTCATT	NA	False	NA	-2	True	NA	NA	NA	132669552	132496987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_132498390_132501507_132501578_132504023_132504156_132523221_132523396_132524263_132524387_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
Isoform_89738_5	chr1	-	3157	21	NNC	ENSMUSG00000026442.15	novel	4927	32	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	6.27295783502488	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCATTAGCCAATTTTG	NA	False	NA	NA	False	AAGAAA	-1	NA	132669534	132527577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669403
Isoform_89739_34	chr1	-	3136	21	NIC	ENSMUSG00000026442.15	novel	4927	32	NA	NA	-4	-7	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	5.90148286450109	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATCATTAGCCAATTT	NA	False	NA	NA	False	NA	NA	NA	132669520	132527579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
Isoform_89746_16	chr1	-	1994	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	35	5076	-24	58	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGTTATGTAATGTT	NA	False	NA	0	True	AATACA	-20	NA	132953119	132919033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
Isoform_8975_11	chr10	+	4162	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-16467	0	intron_retention	FALSE	canonical	3	32	junction_1	81.6001306057711	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTCACTTCTCTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	25258089	25399415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_25258259_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_89750_83	chr1	-	7029	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	75	1	-3	-1	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953079	132913958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
Isoform_89755_66	chr1	-	7028	11	FSM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	19	-5133	1	-1	multi-exon	FALSE	canonical	3	161	junction_9	94.8116026654966	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953075	132913958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
Isoform_89758_71	chr1	-	6961	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953079	132913958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
Isoform_8976_10	chr10	+	707	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	-47	-4	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_5	3.96988664825584	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGTGACTGATGCAATA	NA	False	NA	2	True	AATAAA	-12	NA	127563668	127567632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
Isoform_89765_35	chr1	-	6987	10	FSM	ENSMUSG00000054387.14	ENSMUST00000191212.7	2799	10	-6	-4182	-6	0	multi-exon	FALSE	canonical	3	144	junction_5	107.251521615728	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953101	132913957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
Isoform_8977_11	chr10	+	600	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	60	-4	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	3.96988664825584	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGTGACTGATGCAATA	NA	False	NA	2	True	AATAAA	-12	NA	127563775	127567632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
Isoform_89771_3	chr1	-	3816	14	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	28.2966115436473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352194	133310040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133311663_133312150_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
Isoform_89773_65	chr1	-	3733	14	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	19.4802281798964	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352158	133310040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
Isoform_89775_63	chr1	-	3736	14	FSM	ENSMUSG00000070643.12	ENSMUST00000153799.8	3693	14	-43	0	-43	0	multi-exon	FALSE	canonical	3	38	junction_8	19.9582404271205	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352158	133310040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
Isoform_89780_44	chr1	-	4265	13	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-43	0	intron_retention	FALSE	canonical	3	41	junction_7	18.2412459978905	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352158	133310040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
Isoform_89781_30	chr1	-	4271	13	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-43	3	intron_retention	FALSE	canonical	3	38	junction_7	18.8252194911212	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTTTCTCTGCTGGG	NA	False	NA	-5	True	AATAAA	-18	NA	133352158	133310037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
Isoform_89785_57	chr1	-	640	4	FSM	ENSMUSG00000090553.9	ENSMUST00000172079.2	653	4	29	-16	29	-4	multi-exon	FALSE	canonical	3	3763	junction_3	471.411356107027	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTACATTGTTTCAT	NA	False	NA	-18	True	AATAAA	-21	NA	133537756	133531617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455
Isoform_89787_1687	chr1	-	482	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	13	8	13	-3	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTACATTGTTTCATT	NA	False	NA	-17	True	AATAAA	-22	NA	133538016	133531616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
Isoform_8982_4	chr10	+	1772	2	NNC	ENSMUSG00000111919.2	novel	326	2	NA	NA	-44	3020	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCCTATATAAACCTG	NA	False	NA	NA	False	NA	NA	NA	88540412	88543957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_88540492_88542264
Isoform_89821_7	chr1	-	6153	16	ISM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	5446	0	5446	0	3prime_fragment	FALSE	canonical	3	293	junction_13	50.7709453219938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133583672	133547608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
Isoform_8983_3	chr10	+	1917	2	NNC	ENSMUSG00000111919.2	novel	326	2	NA	NA	-199	3010	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAGAAACCCTA	NA	False	NA	NA	False	NA	NA	NA	88540257	88543947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_88540492_88542264
Isoform_89838_106	chr1	-	4441	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-55	10	-5	-10	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCTTAGTTCTTATCA	NA	False	NA	-9	True	AATAAA	-11	NA	133589111	133547609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
Isoform_8984_13	chr10	+	6248	29	NNC	ENSMUSG00000001150.8	novel	578	5	NA	NA	-5881	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	64.111699002441	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	5724	False	NA	12	True	AATAAA	-18	NA	76298879	76351691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_76298989_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
Isoform_89843_62	chr1	-	4424	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-5	-8	combination_of_known_junctions	FALSE	canonical	3	78	junction_17	104.361959952471	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTAGTTCTTATCATT	NA	False	NA	-7	True	AATAAA	-13	NA	133589111	133547607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
Isoform_89849_7	chr1	-	4343	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	53	-1	53	1	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTAGTTCTTATCATT	NA	False	NA	-7	True	AATAAA	-13	NA	133589065	133547607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
Isoform_89851_49	chr1	-	4376	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589118	133547608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
Isoform_89854_10	chr1	-	4854	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	109.88493510003	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCTTAGTTCTTATCA	NA	False	NA	-9	True	AATAAA	-11	NA	133589118	133547609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133583082_133583137_133588974
Isoform_89855_7	chr1	-	4830	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-5	-8	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	116.945969839032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTAGTTCTTATCATT	NA	False	NA	-7	True	AATAAA	-13	NA	133589111	133547607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133583082_133583137_133588993
Isoform_89857_10	chr1	-	4792	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_16	103.726503363412	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTAGTTCTTATCATT	NA	False	NA	-7	True	AATAAA	-13	NA	133589108	133547607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133588974
Isoform_89859_7	chr1	-	4796	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	105.649904608334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTAGTTCTTATCATT	NA	False	NA	-7	True	AATAAA	-13	NA	133589131	133547607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133588993
Isoform_8986_14	chr10	+	2959	7	Fusion	ENSMUSG00000078427.4_ENSMUSG00000025354.6	novel	427	7	NA	NA	-569	651	multi-exon	FALSE	canonical	3	6	junction_1	135.15299972007	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTCTCTTCTTTAC	3447	False	NA	NA	False	TATAAA	-20	NA	128640853	128654023	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr10_+_128640915_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
Isoform_89861_63	chr1	-	5755	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	7	1	intron_retention	FALSE	canonical	3	133	junction_16	79.3516697996961	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTAGTTCTTATCATT	NA	False	NA	-7	True	AATAAA	-13	NA	133589111	133547607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
Isoform_89863_33	chr1	-	5715	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-5	-8	at_least_one_novel_splicesite	TRUE	non_canonical	3	69	junction_16	112.681994275528	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTAGTTCTTATCATT	NA	False	NA	-7	True	AATAAA	-13	NA	133589111	133547607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582671_133582691_133583137_133588993
Isoform_8987_6	chr10	+	5365	30	NNC	ENSMUSG00000038774.10	novel	529	3	NA	NA	30234	-283	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	25.7895996144931	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTACTCTTTTTTTC	NA	False	NA	17	True	AATAAA	-22	NA	50555384	50727298	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_50555698_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
Isoform_89871_13	chr1	-	2623	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	-40	160	-40	-160	multi-exon	FALSE	canonical	3	77	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGTAGAGAAGGTGGA	NA	False	NA	-10	True	AATAAA	-17	NA	134006898	134003067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_134005442_134006649
Isoform_89872_146	chr1	-	2578	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	5	160	5	-160	multi-exon	FALSE	canonical	3	77	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGTAGAGAAGGTGGA	NA	False	NA	-10	True	AATAAA	-17	NA	134006853	134003067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_134005442_134006649
Isoform_89876_3	chr1	-	3203	22	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	286	6	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	14.4984165215603	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254718	134226112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_134226567_134226763_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_89878_55	chr1	-	3066	21	ISM	ENSMUSG00000026458.14	ENSMUST00000186730.7	4674	22	312	1591	312	6	3prime_fragment	FALSE	canonical	2	30	junction_19	10.0641691162261	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254692	134226112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_89879_24	chr1	-	3122	21	ISM	ENSMUSG00000026458.14	ENSMUST00000186730.7	4674	22	255	1592	255	5	3prime_fragment	FALSE	canonical	2	30	junction_19	10.0641691162261	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTTGGACTAATTGG	NA	False	NA	-1	True	AATAAA	-18	NA	134254749	134226113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_8988_5	chr10	+	5585	30	NNC	ENSMUSG00000038774.10	novel	529	3	NA	NA	30019	-278	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	25.7895996144931	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACTCTTTTTTTCTCCTG	NA	False	NA	22	True	AATAAA	-27	NA	50555169	50727303	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_50555698_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
Isoform_89880_15	chr1	-	4681	21	ISM	ENSMUSG00000026458.14	ENSMUST00000186730.7	4674	22	287	1	287	0	3prime_fragment	TRUE	canonical	2	30	junction_19	10.0641691162261	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGGTGTCAGTTTCT	NA	False	NA	-2	True	AATAAA	-22	NA	134254717	134224522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_89881_4	chr1	-	3873	25	NIC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-1821	4	combination_of_known_junctions	FALSE	canonical	2	13	junction_22	14.4076922934321	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGCTTGGACTAATTG	NA	False	NA	-2	True	AATAAA	-17	NA	134256825	134226114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381
Isoform_89883_10	chr1	-	4435	28	NNC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-11762	6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_26	16.5805180934407	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134272428	134226112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260667_134272330
Isoform_89884_3	chr1	-	2975	20	NIC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	304	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_16	12.965755023295	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTCCTGCTTGGACT	NA	False	NA	-7	True	AATAAA	-12	NA	134254700	134226119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_89885_11	chr1	-	3392	21	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	294	6	intron_retention	FALSE	canonical	2	11	junction_1	12.4638477205075	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254710	134226112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_89886_7	chr1	-	3452	21	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	234	6	intron_retention	FALSE	canonical	2	11	junction_1	12.4638477205075	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254770	134226112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_89887_3	chr1	-	4781	28	NNC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	-11801	5	intron_retention	FALSE	canonical	2	6	junction_26	17.1637797724399	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTTGGACTAATTGG	NA	False	NA	-1	True	AATAAA	-18	NA	134272467	134226113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260667_134272330
Isoform_89889_35	chr1	-	3273	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	1	-1585	1	0	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289678	134273834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
Isoform_8989_7	chr10	+	1222	8	NNC	ENSMUSG00000019842.7	novel	768	3	NA	NA	-8841	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	25.1452920898866	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTTTATCTCAGTG	NA	False	NA	4	True	AATAAA	-17	NA	39508288	39530820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_39508350_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
Isoform_89894_16	chr1	-	3991	8	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	298.896064114028	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289678	134273834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134283455_134288494_134288663_134289271_134289362_134289499
Isoform_8990_4	chr10	+	1287	9	NNC	ENSMUSG00000019842.7	novel	768	3	NA	NA	-8837	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	30.1307048540189	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGTTTATCTCAGT	NA	False	NA	3	True	AATAAA	-16	NA	39508292	39530819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_39508350_39509687_39509758_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
Isoform_89901_437	chr1	-	3110	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	39	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289678	134273834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
Isoform_89911_83	chr1	-	3108	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	245.748087376036	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289679	134273834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283452_134288494_134288663_134289271_134289362_134289499
Isoform_89919_17	chr1	-	3836	7	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_2	231.68009553405	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289686	134273834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134283455_134288494_134288663_134289271_134289362_134289499
Isoform_89922_3	chr1	-	1602	10	ISM	ENSMUSG00000073557.13	ENSMUST00000132025.2	3213	20	0	41898	0	-41898	5prime_fragment	FALSE	canonical	0	0	junction_8	2.0427529234278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGGGGGAGGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	134883666	134803701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
Isoform_89923_7	chr1	-	887	6	ISM	ENSMUSG00000097993.8	ENSMUST00000183317.8	6108	37	22368	-1	238	0	3prime_fragment	FALSE	canonical	3	8	junction_5	3.5213633723318	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGTCTGCTTCTGCA	NA	False	NA	0	True	AATAAA	-19	NA	135037964	135036234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037676_135037822
Isoform_89924_3	chr1	-	406	3	NIC	ENSMUSG00000097993.8	novel	6108	37	NA	NA	-290	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	6	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGTCTGCTTCTGCA	NA	False	NA	0	True	AATAAA	-19	NA	135037617	135036234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_135036434_135036656_135036793_135037546
Isoform_89925_4	chr1	-	2224	2	FSM	ENSMUSG00000026424.9	ENSMUST00000027682.9	2269	2	25	20	25	-20	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCCTGTGCCCACAGAA	9962	False	NA	-2	True	AATAAA	-10	NA	135095394	135087991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135089434_135094612
Isoform_89934_1872	chr1	-	1919	9	FSM	ENSMUSG00000003051.14	ENSMUST00000185752.2	1901	9	-19	1	-19	-1	multi-exon	FALSE	canonical	3	367	junction_7	94.095363860288	1872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGCCTGAGCTCTCTG	NA	False	NA	-11	True	AATAAA	-22	NA	135186195	135181317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
Isoform_89939_1724	chr1	-	1985	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	111	-1	-19	1	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCTCTCTGTGTACT	NA	False	NA	-5	True	AATAAA	-28	NA	135186195	135181311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
Isoform_89940_191	chr1	-	2011	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	84	0	-46	0	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGAGCTCTCTGTGTAC	NA	False	NA	-6	True	AATAAA	-27	NA	135186222	135181312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
Isoform_89950_1044	chr1	-	2269	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	30	-11	30	11	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGAATGACTCATTTATT	NA	False	NA	-3	True	AATAAA	-33	NA	135211792	135190438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
Isoform_89951_196	chr1	-	2285	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	3	0	3	0	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	False	NA	-14	True	AATAAA	-22	NA	135211819	135190449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
Isoform_89955_28	chr1	-	2138	10	FSM	ENSMUSG00000041926.16	ENSMUST00000074357.8	2171	10	31	2	31	-2	multi-exon	FALSE	canonical	3	54	junction_7	75.0946727574148	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGTTGGAGTTATAGAA	NA	False	NA	-16	True	AATAAA	-20	NA	135211791	135190451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135205126_135205276_135206504_135206646_135211299
Isoform_8996_5	chr10	+	1055	3	NNC	ENSMUSG00000046463.6	novel	1791	3	NA	NA	1336	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCTTGGTCATGGT	NA	False	NA	3	True	NA	NA	NA	37018420	37027310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_37018518_37024872_37025003_37026482
Isoform_89964_873	chr1	-	904	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	42	6334	42	269	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTCCTTTGAAAGTTAG	NA	False	NA	-18	True	AATAAA	-17	NA	135241474	135229284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
Isoform_89968_35	chr1	-	1215	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	41	6024	41	579	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135241475	135228974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
Isoform_8997_7	chr10	+	1685	3	NNC	ENSMUSG00000046463.6	novel	1791	3	NA	NA	1384	677	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACAATCCTCAGAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	37018468	37027988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_37018518_37024872_37025003_37026482
Isoform_89973_7	chr1	-	1002	3	FSM	ENSMUSG00000041889.8	ENSMUST00000159918.2	1404	3	6	396	6	-396	multi-exon	FALSE	canonical	3	26	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGAATCACTGGCCCC	NA	False	NA	-7	True	ATTAAA	-20	NA	135301182	135299193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135299735_135299934_135300103_135300889
Isoform_89974_4	chr1	-	1399	3	FSM	ENSMUSG00000041889.8	ENSMUST00000159918.2	1404	3	6	-1	6	1	multi-exon	FALSE	canonical	3	26	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGAGTCCGTCCTTCC	NA	False	NA	1	True	NA	NA	NA	135301182	135298796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135299735_135299934_135300103_135300889
Isoform_89975_9	chr1	-	1201	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	163	399	3	-396	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGAATCACTGGCCCC	NA	False	NA	-7	True	ATTAAA	-20	NA	135302812	135299193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
Isoform_89976_5	chr1	-	1580	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	186	-3	26	3	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCCGTCCTTCCTTCCT	NA	False	NA	6	True	NA	NA	NA	135302789	135298791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
Isoform_89977_3	chr1	-	1499	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	161	103	1	-100	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTCTTCACTGTCT	NA	False	NA	-100	True	TATAAA	-35	NA	135302814	135298897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
Isoform_8999_5	chr10	+	1331	3	NNC	ENSMUSG00000047631.5	novel	1258	2	NA	NA	-5380	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCACAGTATTTATCATTC	1565	False	NA	NA	False	ATTAAA	-15	NA	128098485	128106021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_128098581_128104560_128104639_128104863
Isoform_89997_35	chr1	-	4137	25	FSM	ENSMUSG00000041879.14	ENSMUST00000161189.8	4189	25	50	2	-8	-2	multi-exon	FALSE	canonical	0	0	junction_23	161.892405756622	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358179	135312212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
Isoform_9000_6	chr10	+	1267	2	Genic_Genomic	ENSMUSG00000091101.3	novel	927	1	NA	NA	-993	266	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAGTATTCTAGAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	100175704	100177890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_100175773_100176691
Isoform_90000_1035	chr1	-	4024	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	56	2167	-10	-6	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTTAGTCTGCATAC	NA	False	NA	-25	True	AGTAAA	-13	NA	135358181	135312216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
Isoform_90004_123	chr1	-	6184	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	59	4	-7	-4	multi-exon	TRUE	canonical	3	518	junction_15	35.6964730086209	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTCTCCTGTCAGTTT	NA	False	NA	-8	True	AATAAA	-17	NA	135358178	135310053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
Isoform_90006_167	chr1	-	4080	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	0	2167	0	-6	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTTAGTCTGCATAC	NA	False	NA	-25	True	AGTAAA	-13	NA	135358237	135312216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
Isoform_9001_7	chr10	+	1185	2	Genic_Genomic	ENSMUSG00000091101.3	novel	927	1	NA	NA	-993	184	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATTTTGTGGATAAATT	NA	False	NA	NA	False	AATACA	-15	NA	100175704	100177808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_100175773_100176691
Isoform_90010_29	chr1	-	6242	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	0	5	0	-5	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135358237	135310054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
Isoform_90027_6	chr1	-	2854	20	NNC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	1654	-2576	at_least_one_novel_splicesite	FALSE	non_canonical	3	46	junction_18	14.6334720471638	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGGTCTTTTCTTCA	NA	False	NA	-2	True	NA	NA	NA	135393757	135369161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_135369389_135369410_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576
Isoform_90030_5	chr1	-	5382	27	NNC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-20	-1993	at_least_one_novel_splicesite	TRUE	non_canonical	2	3	junction_26	18.3846556163062	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATTTCTATTTTT	3345	False	NA	-14	True	AATAAA	-19	NA	135438142	135368578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_135369389_135369410_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135437941
Isoform_90036_9	chr1	-	2621	10	NIC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	145	8	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	17.8954439335895	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTGTGTGTGCTGAG	NA	False	NA	-5	True	AATAAA	-28	NA	136161712	136141260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155316_136161640
Isoform_90037_6	chr1	-	3248	10	NNC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	785	8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	16.431676725155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTGTGTGTGCTGAG	NA	False	NA	-5	True	AATAAA	-28	NA	136161072	136141260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136160458
Isoform_90038_92	chr1	-	2797	10	FSM	ENSMUSG00000041605.17	ENSMUST00000120339.8	2988	10	201	-10	56	10	multi-exon	TRUE	canonical	3	39	junction_9	8.93736780097342	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGTGTGCTGAGTT	NA	False	NA	-3	True	AATAAA	-30	NA	136161801	136141258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136161640
Isoform_90039_4	chr1	-	3049	10	FSM	ENSMUSG00000041605.17	ENSMUST00000120339.8	2988	10	-55	-6	-55	6	multi-exon	FALSE	canonical	3	39	junction_9	8.93736780097342	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTCTGTGTGTGTGCTG	NA	False	NA	-7	True	AATAAA	-26	NA	136162057	136141262	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136161640
Isoform_90042_20	chr1	-	7634	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	-418	-887	-12	-21	multi-exon	FALSE	canonical	3	33	junction_16	9.18197112552637	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTGCGTGTTGTCTTGT	6738	False	NA	15	True	AATAAA	-32	NA	136273854	136196010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
Isoform_90043_21	chr1	-	7584	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	-382	-873	10	-35	multi-exon	FALSE	canonical	3	33	junction_16	9.18197112552637	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGATTCTTCAATAAAGT	6774	False	NA	1	True	AATAAA	-18	NA	136273818	136196024	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
Isoform_90047_3	chr1	-	2270	8	NNC	ENSMUSG00000026398.15	novel	1859	8	NA	NA	105	492	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.8424605856724	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATATGTGCTGAAGT	NA	False	NA	-23	True	TATAAA	-15	NA	136877195	136772559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136877122
Isoform_90049_14	chr1	-	2951	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	-4	-1191	-4	4	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATACTGGAGGG	NA	False	NA	NA	False	NA	NA	NA	136881372	136772009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
Isoform_90051_15	chr1	-	4630	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	27	-2901	27	9	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTATGTTGTCCTTGTG	NA	False	NA	-5	True	AATAAA	-32	NA	136881341	136770299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
Isoform_90057_3	chr1	-	3710	7	ISM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	23	42847	23	2047	5prime_fragment	FALSE	canonical	3	24	junction_6	14.2877181134319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	136881345	136816047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
Isoform_90065_20	chr1	-	4269	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	26	963	-19	-1	multi-exon	FALSE	canonical	3	136	junction_1	7.19739321808962	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGGATGATCATCGTC	NA	False	NA	-1	True	AATAAA	-17	NA	138547461	138411575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
Isoform_90066_14	chr1	-	4312	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	-16	962	-16	0	multi-exon	TRUE	canonical	3	136	junction_1	7.19739321808962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGATGATCATCGTCT	NA	False	NA	0	True	AATAAA	-18	NA	138547503	138411574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
Isoform_90067_98	chr1	-	4023	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	-4	1239	-4	-2	multi-exon	FALSE	canonical	3	136	junction_1	7.19739321808962	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTAGTATCTATCAGG	NA	False	NA	-14	True	AATAAA	-14	NA	138547491	138411851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
Isoform_90077_5	chr1	-	3442	2	FSM	ENSMUSG00000079283.3	ENSMUST00000195075.2	970	2	-2475	3	22	-3	multi-exon	FALSE	canonical	3	59	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGGTCCACAAGATG	NA	False	NA	-5	True	ATTAAA	-12	NA	138784563	138779724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_138779912_138781308
Isoform_90078_8	chr1	-	536	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	25	4	20	-3	multi-exon	FALSE	canonical	3	59	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGGTCCACAAGATG	NA	False	NA	-5	True	ATTAAA	-12	NA	138784565	138779724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_138779912_138781308_138781411_138784318
Isoform_90079_3	chr1	-	533	3	ISM	ENSMUSG00000026365.16	ENSMUST00000148225.2	3415	6	114	17219	-17	-17219	5prime_fragment	FALSE	canonical	3	9	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACTATGCAGTTAAT	NA	False	NA	NA	False	AATATA	-8	NA	140111035	140090175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_140090390_140090688_140090875_140110902
Isoform_9008_11	chr10	+	828	2	NNC	ENSMUSG00000020308.8	novel	368	2	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTTGCTGGTCACCT	8493	False	NA	10	True	AATAAA	-12	NA	79505730	79511960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_79505832_79511233
Isoform_90081_66	chr1	-	2804	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	82	8700	82	-1339	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGTGTTCAATGTG	NA	False	NA	0	True	GATAAA	-16	NA	143578549	143483237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
Isoform_90082_159	chr1	-	2531	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	82	8973	82	-1612	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGTAGTGATTTTTAC	NA	False	NA	NA	False	ATTAAA	-7	NA	143578549	143483510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
Isoform_90087_41	chr1	-	6683	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	81	4822	81	2539	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATGAGTTAAATCCTT	NA	False	NA	-12	True	AATAAA	-17	NA	143578550	143479359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
Isoform_90089_8	chr1	-	6234	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	51	5301	51	2060	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGGTCAGACTTCTGA	NA	False	NA	-1	True	AGTAAA	-15	NA	143578580	143479838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
Isoform_9010_3	chr10	+	762	2	Antisense	novelGene_ENSMUSG00000039824.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAGGAGCAAATTTGA	7106	False	NA	NA	False	NA	NA	NA	128329846	128338833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_128330053_128338277
Isoform_90102_11	chr1	-	3926	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	30	4782	30	276	multi-exon	FALSE	canonical	3	15	junction_2	6.34428877022476	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCAACAGATAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	143652776	143631309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
Isoform_90108_5	chr1	-	2843	18	FSM	ENSMUSG00000056220.15	ENSMUST00000070200.15	2856	18	1	12	1	6	multi-exon	FALSE	canonical	0	0	junction_2	1.05882352941176	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACTAGAAACTTGAGTC	3933	False	NA	NA	False	AATAAA	-18	NA	149837040	149705380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_149705944_149716368_149716527_149717914_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288_149748512_149755740_149755878_149761897_149762040_149763357_149763396_149776850_149776965_149778044_149778194_149797805_149797888_149808408_149808508_149836941
Isoform_90109_4	chr1	-	2970	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_13	39.3046062314065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGGAATTTTAAAATAG	982	False	NA	NA	False	AATAAA	-19	NA	150268482	150237057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268354
Isoform_90110_31	chr1	-	2886	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.9368170945323	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	974	False	NA	NA	False	AATAAA	-13	NA	150268490	150237063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
Isoform_90111_37	chr1	-	3005	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_13	31.3627374725987	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	979	False	NA	NA	False	AATAAA	-13	NA	150268485	150237063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268354
Isoform_90112_124	chr1	-	2935	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	331	7	-1	1	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAATGTGGAATTTTAA	964	False	NA	NA	False	AATAAA	-14	NA	150268500	150237062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
Isoform_90114_4	chr1	-	2082	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	-40	1231	-40	-2	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	593	False	NA	NA	False	NA	NA	NA	150268871	150238286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
Isoform_90116_3	chr1	-	3226	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	41	6	16	2	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATGTGGAATTTTAAA	674	False	NA	NA	False	AATAAA	-15	NA	150268790	150237061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
Isoform_9012_5	chr10	+	2760	14	NNC	ENSMUSG00000037455.17	novel	916	4	NA	NA	-5201	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	29.4005192563733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTCATTGTATTCATTC	NA	False	NA	21	True	AATAAA	-14	NA	23667682	23703863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_23667807_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_90125_131	chr1	-	3566	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	123	-1	104	1	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTCCGTTTACTC	NA	False	NA	1	True	AATAAA	-19	NA	151304083	151243448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
Isoform_90127_5	chr1	-	3735	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	-46	-1	-46	1	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTCCGTTTACTC	NA	False	NA	1	True	AATAAA	-19	NA	151304252	151243448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
Isoform_90130_7	chr1	-	2858	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	68	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	42.2765651215601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTCCGTTTACTC	NA	False	NA	1	True	AATAAA	-19	NA	151304119	151243448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
Isoform_90137_23	chr1	-	3042	8	NNC	ENSMUSG00000026484.14	novel	3201	8	NA	NA	1	-108	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTATCTAAGCAGAAA	NA	False	NA	-8	True	ATTAAA	-27	NA	151376561	151345264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
Isoform_90138_11	chr1	-	3147	8	NNC	ENSMUSG00000026484.14	novel	3201	8	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGTTATTAGATGTGT	NA	False	NA	-9	True	CATAAA	-16	NA	151376561	151345159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
Isoform_9014_3	chr10	+	1884	4	Antisense	novelGene_ENSMUSG00000112001.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	11.8133634311129	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAATGTGATACTGCCT	NA	False	NA	NA	False	NA	NA	NA	81523202	81534653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_81523350_81532207_81532335_81532534_81532596_81533104
Isoform_90142_437	chr1	-	2908	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	145	107	1	-107	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTATCTAAGCAGAAAG	NA	False	NA	-7	True	ATTAAA	-28	NA	151376561	151345263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
Isoform_90143_81	chr1	-	3086	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	-33	107	-33	-107	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTATCTAAGCAGAAAG	NA	False	NA	-7	True	ATTAAA	-28	NA	151376739	151345263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
Isoform_90145_142	chr1	-	3013	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	145	2	1	-2	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGTTATTAGATGTGTA	NA	False	NA	-8	True	CATAAA	-17	NA	151376561	151345158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
Isoform_90146_89	chr1	-	2931	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	122	107	0	-107	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTATCTAAGCAGAAAG	NA	False	NA	-7	True	ATTAAA	-28	NA	151376584	151345263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
Isoform_90147_42	chr1	-	3191	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	-34	3	-34	-3	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGTTATTAGATGTGT	NA	False	NA	-9	True	CATAAA	-16	NA	151376740	151345159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
Isoform_90156_13	chr1	-	3471	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-236	6324	-236	2055	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGTACTTTATTT	NA	False	NA	-1	True	CATAAA	-13	NA	151966112	151766598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
Isoform_90158_26	chr1	-	1696	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-201	8064	-201	315	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCCTTGTCTTCTCCCAT	NA	False	NA	-2	True	AATAAA	-18	NA	151966077	151768338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
Isoform_90160_32	chr1	-	1655	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-158	8062	-158	317	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTCTTCTCCCATTC	NA	False	NA	0	True	AATAAA	-20	NA	151966034	151768336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
Isoform_90164_407	chr1	-	1060	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	77	-4	-13	4	multi-exon	FALSE	canonical	3	212	junction_4	96.4219243740758	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTAATCATCCATCATTGC	NA	False	NA	-1	True	AATAAA	-33	NA	152262356	152246481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
Isoform_90165_96	chr1	-	1099	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	32	2	-30	-2	multi-exon	FALSE	canonical	3	212	junction_4	96.4219243740758	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTCGTAATCATCCAT	NA	False	NA	-7	True	AATAAA	-27	NA	152262401	152246487	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
Isoform_90166_4	chr1	-	2639	18	FSM	ENSMUSG00000026482.14	ENSMUST00000027760.14	4572	18	58	1875	58	-76	multi-exon	FALSE	canonical	2	3	junction_17	4.47368313925448	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGATGCTCTTAGATC	NA	False	NA	NA	False	ATTAAA	-12	NA	152500910	152394576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_152394948_152397045_152397161_152400395_152400651_152404023_152404211_152407256_152407347_152409256_152409379_152412017_152412051_152413481_152413569_152415687_152415778_152420101_152420187_152424817_152424922_152428171_152428388_152430046_152430172_152433153_152433339_152447348_152447427_152462157_152462367_152499568_152499680_152500734
Isoform_9017_3	chr10	+	1173	2	Genic_Genomic	ENSMUSG00000096744.2	novel	910	1	NA	NA	-953	187	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTGGATAAATTGTA	NA	False	NA	NA	False	AATACA	-18	NA	100196246	100198296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_100196315_100197191
Isoform_90170_13	chr1	-	5950	23	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	78.6312137041966	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778406	152712745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_90173_13	chr1	-	5935	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_22	89.5804967971668	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATCGGTGTGTAGAGG	NA	False	NA	-7	True	ATTAAA	-15	NA	152778396	152712749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
Isoform_90175_38	chr1	-	5812	23	FSM	ENSMUSG00000042772.16	ENSMUST00000111836.4	3928	23	-9	-1875	-9	0	multi-exon	FALSE	canonical	3	60	junction_6	70.0173089579927	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778406	152712745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_90176_10	chr1	-	5930	23	FSM	ENSMUSG00000042772.16	ENSMUST00000111836.4	3928	23	-128	-1874	-128	0	multi-exon	FALSE	canonical	3	60	junction_6	70.0173089579927	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778525	152712746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_9018_4	chr10	+	1249	2	Genic_Genomic	ENSMUSG00000112931.2	novel	910	1	NA	NA	-953	263	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAGTATTCTAGA	NA	False	NA	NA	False	AATAAA	-11	NA	100180880	100183006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_100180949_100181825
Isoform_90182_7	chr1	-	6048	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	82.062715384018	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778518	152712746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
Isoform_90186_56	chr1	-	5788	22	FSM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	-22	1	2	0	multi-exon	FALSE	canonical	3	75	junction_8	55.4427244244903	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778395	152712746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_90187_14	chr1	-	5919	22	FSM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	-152	0	-128	0	multi-exon	FALSE	canonical	3	75	junction_8	55.4427244244903	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778525	152712745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_90192_14	chr1	-	5765	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_18	80.4197279566905	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778406	152712745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_90195_33	chr1	-	5799	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	74.1391504966413	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778406	152712745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
Isoform_90196_14	chr1	-	5906	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-116	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	74.1391504966413	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778513	152712745	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
Isoform_90198_132	chr1	-	5650	22	NIC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_5	39.6466250175655	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778395	152712746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_90200_52	chr1	-	5776	22	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-127	-3	combination_of_known_junctions	FALSE	canonical	3	176	junction_5	39.6466250175655	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATCGGTGTGTAGAGG	NA	False	NA	-7	True	ATTAAA	-15	NA	152778524	152712749	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_90208_14	chr1	-	1812	3	FSM	ENSMUSG00000026479.14	ENSMUST00000189005.2	440	3	44	-1416	44	-1	multi-exon	FALSE	canonical	3	112	junction_2	14	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGTTTCTGATTTTAT	NA	False	NA	-2	True	AATAAA	-18	NA	153002936	152998502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153000030_153002561_153002662_153002751
Isoform_90209_8	chr1	-	2219	4	ISM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	56657	2	-2156	-2	3prime_fragment	FALSE	canonical	3	102	junction_3	16.0831174424198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGAGTTTCTGATTTTA	NA	False	NA	-3	True	AATAAA	-17	NA	153005136	152998503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702
Isoform_90212_3	chr1	-	3208	13	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	11035	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	32.3963089461336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	153016797	152998501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153016731
Isoform_90213_5	chr1	-	3526	13	ISM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	44137	1	10176	-1	3prime_fragment	FALSE	canonical	3	81	junction_12	15.2014253717648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGTTTCTGATTTTAT	NA	False	NA	-2	True	AATAAA	-18	NA	153017656	152998502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271
Isoform_90216_4	chr1	-	4913	23	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	11006	-17	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_22	23.8206105631931	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTAGATGCTGGGGCT	NA	False	NA	-18	True	AATAAA	-2	NA	153050787	152998518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153050634
Isoform_90218_81	chr1	-	5090	23	FSM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	-174	0	-174	0	multi-exon	FALSE	canonical	3	71	junction_14	15.8534090501821	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	153061967	152998501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
Isoform_90221_10	chr1	-	5079	24	FSM	ENSMUSG00000026479.14	ENSMUST00000027753.13	5164	24	85	0	85	0	multi-exon	FALSE	canonical	1	4	junction_23	24.3679264856456	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	153062108	152998501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654_153061848_153061999
Isoform_9026_3	chr10	+	519	4	Antisense	novelGene_ENSMUSG00000019868.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGACTTCATCCCTGTT	760	False	NA	NA	False	AATAAA	-28	NA	14523824	14535618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_14523956_14528662_14528729_14532326_14532395_14535364
Isoform_9027_4	chr10	+	3542	22	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	-430	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.6084769824104	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATCTACTGTACACA	1841	False	NA	-6	True	AATAAA	-22	NA	127478424	127496826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_127478456_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_90280_960	chr1	-	7598	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	24	0	24	0	multi-exon	TRUE	canonical	3	518	junction_2	111.881330429904	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153208508	153094667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
Isoform_90281_50	chr1	-	7767	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-147	2	-147	-2	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTGTGTGGCCTAAA	NA	False	NA	-3	True	AATAAA	-22	NA	153208679	153094669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
Isoform_9029_5	chr10	+	2018	11	NNC	ENSMUSG00000044475.15	novel	1473	11	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	72.0639299511205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59839060	59935808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_59839698_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
Isoform_90296_19	chr1	-	2628	11	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	21	29700	21	-5	5prime_fragment	FALSE	canonical	3	696	junction_9	48.7156032498829	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGCCTTCAAGAACT	NA	False	NA	NA	False	AATAAA	-7	NA	153208511	153124367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
Isoform_90298_21	chr1	-	1884	2	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	39	42509	39	-12814	5prime_fragment	FALSE	canonical	3	756	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153208493	153137176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_153138441_153207873
Isoform_90300_18	chr1	-	543	2	FSM	ENSMUSG00000073538.11	ENSMUST00000186785.7	1964	2	1	1420	1	0	multi-exon	FALSE	canonical	3	87	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGGGGTGTGGCCTGC	NA	False	NA	NA	False	NA	NA	NA	153283535	153281992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153282348_153283347
Isoform_90302_5	chr1	-	1836	11	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	72.0569219436967	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTGATTGTGTCATTG	NA	False	NA	-8	True	AATAAA	-11	NA	153363370	153331510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334013_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354623_153358517_153358532_153363295
Isoform_90321_19	chr1	-	4601	28	FSM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	-42	2	1	-2	multi-exon	TRUE	canonical	3	12	junction_24	37.4089841985242	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363396	153331505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354725_153356877_153356996_153358487_153358629_153359485_153359619_153363278
Isoform_90322_4	chr1	-	4664	28	FSM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	-105	2	-53	-2	multi-exon	FALSE	canonical	3	12	junction_24	37.4089841985242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363459	153331505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354725_153356877_153356996_153358487_153358629_153359485_153359619_153363278
Isoform_90324_109	chr1	-	4600	28	FSM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	10	6	1	-6	multi-exon	FALSE	canonical	3	83	junction_24	29.9642219210858	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGATTGTGTCATTGA	NA	False	NA	-7	True	AATAAA	-12	NA	153363396	153331509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
Isoform_90333_137	chr1	-	1405	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	333	-3	-1	3	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTAATCTTGTT	NA	False	NA	-13	True	AATAAA	-23	NA	153425458	153378757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
Isoform_90334_21	chr1	-	1443	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	295	-3	-39	3	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTAATCTTGTT	NA	False	NA	-13	True	AATAAA	-23	NA	153425496	153378757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
Isoform_90335_4	chr1	-	1537	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	211	-13	-123	13	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTGTTTCAAAGGTTT	NA	False	NA	-3	True	AATAAA	-33	NA	153425580	153378747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
Isoform_90336_3	chr1	-	4951	10	FSM	ENSMUSG00000033722.10	ENSMUST00000186156.7	4873	10	-83	5	-83	-3	multi-exon	FALSE	canonical	0	0	junction_1	2.14878662286819	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATTGCTGGATTCTGTC	8244	False	NA	NA	False	ATTAAA	-20	NA	155120273	155088221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155089460_155093127_155093313_155094005_155094134_155097080_155097334_155099020_155099178_155100656_155102195_155108191_155108336_155116481_155116546_155117170_155118073_155119931
Isoform_90338_8	chr1	-	4504	15	FSM	ENSMUSG00000026469.15	ENSMUST00000027741.12	7492	15	-88	3076	-2	205	multi-exon	FALSE	canonical	2	7	junction_5	3.69569523436472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCTGTGAATTGTCAGC	NA	False	NA	-1	True	AATAAA	-22	NA	155293163	155154522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
Isoform_90339_68	chr1	-	2489	13	FSM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	-55	-1	-10	1	multi-exon	FALSE	canonical	3	21	junction_7	5.99247212944893	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAACGTGTTTGACTTGA	NA	False	NA	-4	True	AATAAA	-20	NA	155688645	155653906	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
Isoform_9034_3	chr10	+	2160	5	NNC	ENSMUSG00000091415.6	novel	6968	40	NA	NA	95260	-25626	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.30116263352131	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAATCTGACTTGTGAA	NA	False	NA	NA	False	AAGAAA	-10	NA	41275235	41284904	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_41275344_41275667_41275888_41278227_41278294_41282823_41283031_41283345
Isoform_90340_14	chr1	-	3336	12	FSM	ENSMUSG00000033684.15	ENSMUST00000035325.15	3348	12	12	0	12	0	multi-exon	FALSE	canonical	3	21	junction_6	6.25887799202127	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTTGACTTGATCC	NA	False	NA	-1	True	AATAAA	-23	NA	155688623	155653903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
Isoform_90341_3	chr1	-	2698	2	FSM	ENSMUSG00000033684.15	ENSMUST00000140809.2	2664	2	-33	-1	18	1	multi-exon	FALSE	canonical	3	34	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155688617	155677191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155679544_155688271
Isoform_90342_44	chr1	-	1654	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	521	548	91	-1	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCCTAATTATCTGTGA	NA	False	NA	NA	False	AGTAAA	-35	NA	155911705	155882527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_90343_4	chr1	-	1832	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	328	563	-5	-16	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACTAAATCATTAACCAG	NA	False	NA	NA	False	AGTAAA	-20	NA	155911898	155882542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_90344_12	chr1	-	1758	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	415	550	-15	-3	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAGCCTAATTATCTGT	NA	False	NA	NA	False	AGTAAA	-33	NA	155911811	155882529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_90345_4	chr1	-	3854	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	520	-1651	90	16	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTTTTTTGTTTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	155911706	155880328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_90348_38	chr1	-	1598	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	468	2168	91	-1	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCCTAATTATCTGTGA	NA	False	NA	NA	False	AGTAAA	-35	NA	155911705	155882527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_9035_4	chr10	+	1408	5	NNC	ENSMUSG00000035697.15	novel	3948	23	NA	NA	6666	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	39.7617907041421	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCCCGATCTTGTTCT	2556	False	NA	11	True	AATAAA	-16	NA	79864242	79867301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_79864389_79864490_79864718_79864806_79865018_79866122_79866211_79866565
Isoform_90351_7	chr1	-	3796	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	468	-30	91	15	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGGTTTTTTGTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	155911705	155880329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_90352_4	chr1	-	3879	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	385	-30	8	15	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGGTTTTTTGTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	155911788	155880329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_90353_3	chr1	-	3814	6	NNC	ENSMUSG00000015484.4	novel	3882	5	NA	NA	-62	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.35646599662505	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCAGAGGGTCTTCCTT	4785	False	NA	NA	False	AATAAA	-19	NA	156032658	155951708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_155952557_155952584_155955057_155955697_155955813_155957137_155957160_155963534_155963633_156032399
Isoform_90355_6	chr1	-	3530	18	FSM	ENSMUSG00000060985.16	ENSMUST00000167528.9	3210	18	-326	6	-10	-6	multi-exon	TRUE	canonical	2	2	junction_17	3.94424814452711	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAATTGTTTGTGATC	NA	False	NA	NA	False	GATAAA	-11	NA	156131244	156082873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129314_156129477_156129936_156130173_156130880
Isoform_90356_82	chr1	-	3076	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	28	5267	-7	1	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACATGTACTCATATGTG	1727	False	NA	-5	True	AATAAA	-21	NA	156301873	156257361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
Isoform_90366_6	chr1	-	3034	4	ISM	ENSMUSG00000060519.12	ENSMUST00000156861.8	3545	6	4551	1	-3044	-1	3prime_fragment	FALSE	canonical	3	47	junction_2	7.36357401145817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGATGGTTCTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	156497344	156481187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940
Isoform_90369_83	chr1	-	3264	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	20	1	-1	-1	multi-exon	FALSE	canonical	3	42	junction_5	7.96492310069595	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGATGGTTCTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	156501906	156481187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
Isoform_9037_3	chr10	+	468	3	NNC	ENSMUSG00000100550.3	novel	642	3	NA	NA	3126	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	6	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGGTTGGGAAGTCAAG	NA	False	NA	NA	False	NA	NA	NA	95193875	95199077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_95193983_95194128_95194221_95198808
Isoform_90374_6	chr1	-	3322	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	-38	1	-38	-1	multi-exon	FALSE	canonical	3	42	junction_5	7.96492310069595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGATGGTTCTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	156501964	156481187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
Isoform_90379_157	chr1	-	4531	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	-12	13	2	-13	multi-exon	TRUE	canonical	3	105	junction_8	37.6710681425414	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTATAATGTCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	156546654	156506114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
Isoform_90384_150	chr1	-	4421	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	18	-25	4	-14	multi-exon	FALSE	canonical	3	86	junction_7	39.1298205610869	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATTGTATAATGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	156546638	156506115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
Isoform_90391_7	chr1	-	3092	21	NIC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	84.0799619409999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAACCTTTTCTTG	NA	False	NA	-41	True	AATAAA	-28	NA	156767151	156635695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90393_75	chr1	-	2291	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-57	713	5	1	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTAACTTTGTACTA	NA	False	NA	-5	True	AATAAA	-17	NA	156767158	156636398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90394_69	chr1	-	2999	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-57	5	5	1	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCTTTTCTTGTATGA	NA	False	NA	-36	True	AATAAA	-33	NA	156767158	156635690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90395_10	chr1	-	3061	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-124	10	-29	-4	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAACCTTTTCTTG	NA	False	NA	-41	True	AATAAA	-28	NA	156767225	156635695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90398_12	chr1	-	6971	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-72	-3952	-1	2	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTGTGGGCTTTTTTTG	NA	False	NA	3	True	AATAAA	-16	NA	156767173	156631733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90399_12	chr1	-	2317	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	11	2070	5	0	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTAACTTTGTACT	NA	False	NA	-6	True	AATAAA	-16	NA	156767158	156636399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90400_6	chr1	-	3020	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	11	1367	5	-5	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAACCTTTTCTT	NA	False	NA	-42	True	AATAAA	-27	NA	156767158	156635696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90405_22	chr1	-	2959	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-63	1341	2	15	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCACAAAATGTACCAGAA	NA	False	NA	-16	True	TATAAA	-17	NA	156767176	156635670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90407_118	chr1	-	2915	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-45	1367	5	-5	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAACCTTTTCTT	NA	False	NA	-42	True	AATAAA	-27	NA	156767158	156635696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90409_13	chr1	-	6869	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-45	-2587	5	-7	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATAGATTGTGTGGG	NA	False	NA	-6	True	AATAAA	-7	NA	156767158	156631742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90414_12	chr1	-	1595	12	ISM	ENSMUSG00000026594.15	ENSMUST00000190648.7	2498	15	5	9744	5	-69	5prime_fragment	FALSE	canonical	3	193	junction_3	27.825311029426	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTACTGTTTATATTT	NA	False	NA	NA	False	AATAAA	-11	NA	156767158	156656190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_90418_36	chr1	-	1805	8	ISM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	-661	35460	0	-15	5prime_fragment	FALSE	canonical	2	7	junction_1	2.84999104903714	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAGGACA	4366	False	NA	NA	False	NA	NA	NA	157240165	157003563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
Isoform_90427_2016	chr1	-	1483	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	58	557	-12	-557	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	2016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAGTTCTGCAATCT	7354	False	NA	-8	True	AATAAA	-17	NA	160040387	160030493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
Isoform_90430_692	chr1	-	1539	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	2	557	2	-557	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAGTTCTGCAATCT	7298	False	NA	-8	True	AATAAA	-17	NA	160040443	160030493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
Isoform_90446_3	chr1	-	3906	27	NIC	ENSMUSG00000026721.17	novel	6338	9	NA	NA	89	2504	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	11.0034959479669	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTGGCTCTGGTATTC	NA	False	NA	NA	False	AATAAA	-25	NA	160620419	160051107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568370_160568453_160568502_160620305
Isoform_90447_5	chr1	-	8338	26	NIC	ENSMUSG00000026721.17	novel	6338	9	NA	NA	102	-3	intron_retention	FALSE	canonical	1	4	junction_7	11.2214081112844	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTGTCTAATTTTTT	NA	False	NA	-12	True	AATAAA	-14	NA	160620406	160046746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568502_160620305
Isoform_90449_850	chr1	-	2695	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	16	908	0	-4	multi-exon	FALSE	canonical	3	321	junction_5	41.9044672439586	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGAGTATTTAGAGTC	NA	False	NA	-20	True	AATGAA	-22	NA	160898212	160869078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
Isoform_90456_31	chr1	-	2154	17	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	96.678510409501	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGAGTCTTCCTGTTT	NA	False	NA	-11	True	AATGAA	-31	NA	160898212	160869069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160898112
Isoform_90457_13	chr1	-	2526	16	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	1	combination_of_known_splicesites	TRUE	canonical	2	15	junction_7	102.476143565222	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTTCCTGTTTTC	NA	False	NA	-9	True	AATGAA	-33	NA	160898212	160869067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
Isoform_90458_13	chr1	-	2643	16	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	101.925768195399	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTTCCTGTTTTC	NA	False	NA	-9	True	AATGAA	-33	NA	160898212	160869067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
Isoform_90466_123	chr1	-	4036	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	16	20	16	3	multi-exon	FALSE	canonical	3	70	junction_3	12.7525722571391	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTTTAATTTTTAAA	NA	False	NA	-17	True	AATAAA	-17	NA	160959065	160915964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
Isoform_90469_18	chr1	-	2058	8	FSM	ENSMUSG00000026705.17	ENSMUST00000148952.8	4182	8	35	2089	-34	1585	multi-exon	FALSE	canonical	3	82	junction_4	11.5387545750335	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGTATGTGTGTGAC	NA	False	NA	NA	False	NA	NA	NA	160959046	160926103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
Isoform_9047_11	chr10	+	176	1	Intergenic	novelGene_827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	42318487	42318663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_42318500_42318700
Isoform_90478_61	chr1	-	1544	6	FSM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	1	-586	1	3	multi-exon	FALSE	canonical	3	50	junction_5	839.164012574419	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTTGTCATGTTTTAA	NA	False	NA	-8	True	AATAAA	-13	NA	161078735	161068581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161076928_161077040_161078591
Isoform_90482_1642	chr1	-	1433	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	54	900	1	3	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTTGTCATGTTTTAA	NA	False	NA	-8	True	AATAAA	-13	NA	161078735	161068581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
Isoform_90485_212	chr1	-	1464	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	23	900	-10	3	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTTGTCATGTTTTAA	NA	False	NA	-8	True	AATAAA	-13	NA	161078766	161068581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
Isoform_90495_18	chr1	-	5750	24	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-166	-731	combination_of_known_junctions	FALSE	canonical	3	62	junction_17	27.0440374610156	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	252	False	NA	-4	True	AATAAA	-21	NA	161704417	161644413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_90499_42	chr1	-	5760	24	FSM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	-163	730	-163	-730	multi-exon	FALSE	canonical	3	81	junction_17	25.1317135224534	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTCTTCTGTCCT	255	False	NA	-3	True	AATAAA	-22	NA	161704414	161644412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_90501_14	chr1	-	5694	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-131	-731	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	29.1913394266289	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	287	False	NA	-4	True	AATAAA	-21	NA	161704382	161644413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_90504_3	chr1	-	5832	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-256	-730	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	27.3306959689789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTCTTCTGTCCT	162	False	NA	-3	True	AATAAA	-22	NA	161704507	161644412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_90506_3	chr1	-	4964	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-164	-1506	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	27.3306959689789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTAAACACACTTAACTA	254	False	NA	NA	False	AATAAA	-16	NA	161704415	161645188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_90509_4	chr1	-	5757	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-163	-730	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	35.7658315574282	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTCTTCTGTCCT	255	False	NA	-3	True	AATAAA	-22	NA	161704414	161644412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_9051_4	chr10	-	163	1	Intergenic	novelGene_828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGAACGAGCGGAGCA	NA	False	NA	NA	False	NA	NA	NA	42515616	42515453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_42515500_42515600
Isoform_90510_4	chr1	-	5594	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	0	-730	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	35.7658315574282	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTCTTCTGTCCT	418	False	NA	-3	True	AATAAA	-22	NA	161704251	161644412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_90511_4	chr1	-	5572	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-12	-731	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	39.0471478096175	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	406	False	NA	-4	True	AATAAA	-21	NA	161704263	161644413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_90512_4	chr1	-	5580	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-8	-731	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	37.7887779047853	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	410	False	NA	-4	True	AATAAA	-21	NA	161704259	161644413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_90514_3	chr1	-	5737	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-164	-730	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	37.7887779047853	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTCTTCTGTCCT	254	False	NA	-3	True	AATAAA	-22	NA	161704415	161644412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
Isoform_90518_287	chr1	-	2961	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	34	1546	5	6	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTTTATCTCAAGTA	NA	False	NA	-5	True	NA	NA	NA	162376086	162361241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
Isoform_90521_13	chr1	-	4515	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	24	2	1	-2	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	162376096	162359697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
Isoform_90522_33	chr1	-	2512	8	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	30.8399422959306	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTTTATCTCAAGTA	NA	False	NA	-5	True	NA	NA	NA	162376097	162361241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373796_162374097_162375672
Isoform_90523_11	chr1	-	2311	7	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	1	6	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	33.2536547698979	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTTTATCTCAAGTA	NA	False	NA	-5	True	NA	NA	NA	162376096	162361241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162373796_162374097_162375672
Isoform_90524_8	chr1	-	6076	6	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	3	5	intron_retention	FALSE	canonical	3	82	junction_4	10.5565145763173	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGTTTATCTCAAGT	NA	False	NA	-6	True	NA	NA	NA	162376088	162361242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162374097_162375672
Isoform_90527_4	chr1	-	2661	7	ISM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	60514	1068	8178	-5	3prime_fragment	FALSE	canonical	3	77	junction_1	32.2253350986801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGAGTCTTGGAACTT	NA	False	NA	NA	False	AATAAA	-11	NA	162507580	162499361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394
Isoform_9053_46	chr10	+	175	1	Intergenic	novelGene_829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCCAAAGTC	1262	False	NA	NA	False	NA	NA	NA	42536370	42536545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_42536400_42536500
Isoform_90531_4	chr1	-	10243	35	FSM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	-22	1068	3	-5	multi-exon	FALSE	canonical	3	34	junction_26	40.8981454897196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGAGTCTTGGAACTT	3423	False	NA	NA	False	AATAAA	-11	NA	162568116	162499361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
Isoform_90535_4	chr1	-	3874	14	ISM	ENSMUSG00000040225.16	ENSMUST00000182593.8	9022	34	47634	-1101	-4658	0	3prime_fragment	FALSE	canonical	3	53	junction_1	27.1996780349897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	162520416	162499356	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304
Isoform_90546_3	chr1	-	2054	12	NIC	ENSMUSG00000040225.16	novel	1827	12	NA	NA	3	78	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	9.98014557935524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGTATGGTGCCCCAC	3423	False	NA	NA	False	AAGAAA	-16	NA	162568116	162537857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550857_162552272_162552439_162567893
Isoform_90556_35	chr1	-	2529	5	NIC	ENSMUSG00000040124.6	novel	2663	6	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	29.2179311382582	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTATGGTCTGTCATTT	NA	False	NA	-3	True	AATAAA	-16	NA	163231227	163212478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_163214267_163219978_163220120_163222159_163222262_163224376_163224739_163231091
Isoform_90557_101	chr1	-	2543	5	FSM	ENSMUSG00000040124.6	ENSMUST00000045138.6	2538	5	-3	-2	-3	2	multi-exon	FALSE	canonical	3	58	junction_3	10.1827059272082	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGTCTGTCATTTAATA	NA	False	NA	1	True	AATAAA	-20	NA	163231241	163212474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_163214267_163219978_163220120_163222159_163222262_163224380_163224739_163231091
Isoform_90562_668	chr1	-	2903	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	19	257	-13	-257	multi-exon	TRUE	canonical	2	170	junction_8	40.7878461455702	668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAATCTTTATTTGAC	NA	False	NA	NA	False	CATAAA	-18	NA	163822346	163781579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
Isoform_90571_6	chr1	-	2463	8	ISM	ENSMUSG00000026577.14	ENSMUST00000027866.11	3948	9	201	1371	-11	218	3prime_fragment	FALSE	canonical	3	12	junction_5	75.5604907018347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	164134852	164118739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164131472_164131494_164134007_164134086_164134715
Isoform_90572_113	chr1	-	2412	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	236	-218	19	218	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	164134822	164118739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
Isoform_90573_56	chr1	-	2642	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	4	-216	-1	216	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTAGTGCCCTTTCCTTT	NA	False	NA	-21	True	AATAAA	-16	NA	164135054	164118741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
Isoform_9058_37	chr10	-	177	1	Intergenic	novelGene_830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	42649450	42649273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_42649300_42649400
Isoform_90585_18	chr1	-	2557	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	4	-959	-1	218	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	164135054	164118739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
Isoform_90587_5	chr1	-	2614	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	-53	-959	-53	218	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	164135111	164118739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
Isoform_90588_4	chr1	-	3591	4	NIC	ENSMUSG00000026577.14	novel	921	5	NA	NA	-16	2731	intron_retention	FALSE	canonical	3	169	junction_1	6.79869268479038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCTCCGGTTACTTA	NA	False	NA	NA	False	NA	NA	NA	164134857	164124379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_164127314_164129852_164130290_164134007_164134086_164134715
Isoform_90597_1490	chr1	-	2579	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	1	0	1	0	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285923	164264677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
Isoform_9060_7	chr10	+	185	1	Intergenic	novelGene_831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTAAAAAAACTGTGG	NA	False	NA	NA	False	NA	NA	NA	42699419	42699604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_42699400_42699600
Isoform_90605_106	chr1	-	2609	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	-29	0	-29	0	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285953	164264677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
Isoform_9061_9	chr10	-	4163	1	Intergenic	novelGene_832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCCCTTTTCAACCAAT	NA	False	NA	NA	False	NA	NA	NA	43235356	43231193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_43231200_43235400
Isoform_90633_30	chr1	-	5434	8	FSM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	95	6	-22	-6	multi-exon	FALSE	canonical	3	60	junction_5	7.62380803664362	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGTAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	165021912	165001911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
Isoform_90636_5	chr1	-	5327	7	FSM	ENSMUSG00000040848.12	ENSMUST00000192185.6	3798	7	-1	-1528	-1	-6	multi-exon	FALSE	canonical	1	2	junction_5	27.3780122645081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGTAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	165021891	165001911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015816_165015904_165021808
Isoform_90639_7	chr1	-	1827	7	NIC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	-25	660	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	206.382062097353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTTTGCTGTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	165064537	165042490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064240
Isoform_9064_5	chr10	-	181	1	Intergenic	novelGene_833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAAGCCAAGA	NA	False	NA	NA	False	NA	NA	NA	43345790	43345609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_43345600_43345800
Isoform_90640_376	chr1	-	1726	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	18	2636	-3	660	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTTTGCTGTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	165064494	165042490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
Isoform_90641_181	chr1	-	1762	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	-14	2632	-14	664	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGCTGTTTATTTCAG	NA	False	NA	-1	True	AATAAA	-22	NA	165064526	165042486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
Isoform_9065_14	chr10	-	172	1	Intergenic	novelGene_713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAACAAAAATAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	5759769	5759597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_5759600_5759800
Isoform_90654_28	chr1	-	3284	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	15	811	15	-4	multi-exon	FALSE	canonical	3	29	junction_4	5.55583332638924	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTAAATTTGACTTTTT	NA	False	NA	-6	True	ATTAAA	-20	NA	165288019	165157077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
Isoform_90655_3	chr1	-	3333	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	-82	859	-72	-52	multi-exon	FALSE	canonical	3	29	junction_4	5.55583332638924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCATGTTTGTTGCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	165288116	165157125	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
Isoform_90656_3	chr1	-	3388	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	-88	810	-78	-3	multi-exon	FALSE	canonical	3	29	junction_4	5.55583332638924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAATTTGACTTTTTA	NA	False	NA	-5	True	ATTAAA	-21	NA	165288122	165157076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
Isoform_90661_938	chr1	-	2285	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	-1	1	-1	-1	multi-exon	FALSE	canonical	3	372	junction_2	205.630737002035	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTGTTGTCTGCTTGTTT	NA	False	NA	-2	True	AATACA	-18	NA	165462099	165419809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
Isoform_90663_22	chr1	-	2340	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	3	-58	3	58	multi-exon	TRUE	canonical	3	372	junction_2	205.630737002035	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGCAGCTGCACAAGC	NA	False	NA	57	True	GATAAA	-15	NA	165462095	165419750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
Isoform_90666_912	chr1	-	2176	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	-6	1	2	-1	multi-exon	FALSE	canonical	3	343	junction_1	201.827896981562	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTGTTGTCTGCTTGTTT	NA	False	NA	-2	True	AATACA	-18	NA	165462096	165419809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
Isoform_90669_22	chr1	-	1820	3	FSM	ENSMUSG00000026566.16	ENSMUST00000194437.6	643	3	-5	-1172	3	-1	multi-exon	FALSE	canonical	3	25	junction_1	400.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTGTTGTCTGCTTGTTT	NA	False	NA	-2	True	AATACA	-18	NA	165462087	165419809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165421247_165436006_165436174_165461871
Isoform_90671_5	chr1	-	2987	2	ISM	ENSMUSG00000040723.15	ENSMUST00000040357.11	2622	7	51024	-3	51024	3	3prime_fragment	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGGTTCTTATTCTGAA	NA	False	NA	1	True	AATAAA	-14	NA	165484593	165476512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_165477780_165482873
Isoform_90672_69	chr1	-	2529	3	NNC	ENSMUSG00000040723.15	novel	5001	6	NA	NA	51023	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	12	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGGTTCTTATTCTGA	NA	False	NA	0	True	AATAAA	-13	NA	165484594	165476513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_165477780_165482873_165483606_165484063
Isoform_90673_3	chr1	-	2820	19	NIC	ENSMUSG00000026565.19	novel	2679	17	NA	NA	0	4	intron_retention	FALSE	canonical	1	1	junction_16	7.97836580934055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTTTAAAAGAAAAAAA	9694	False	NA	-5	True	NA	NA	NA	165830198	165703052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165773470_165773572_165780349_165780426_165830130
Isoform_90674_3	chr1	-	2753	18	NIC	ENSMUSG00000026565.19	novel	2679	17	NA	NA	0	13	intron_retention	FALSE	canonical	0	0	junction_17	7.77272313372185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAAAAAG	9694	False	NA	4	True	NA	NA	NA	165830198	165703043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165773470_165773572_165830130
Isoform_90676_23	chr1	-	2652	17	FSM	ENSMUSG00000026565.19	ENSMUST00000160260.9	13022	17	49	10321	0	13	multi-exon	FALSE	canonical	2	8	junction_3	5.36153837531729	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAAAAAG	9694	False	NA	4	True	NA	NA	NA	165830198	165703043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
Isoform_90678_33	chr1	-	2571	16	FSM	ENSMUSG00000026565.19	ENSMUST00000160908.8	2591	16	-7	27	0	4	multi-exon	FALSE	canonical	3	10	junction_7	5.03940031705713	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTTTAAAAGAAAAAAA	9694	False	NA	-5	True	NA	NA	NA	165830198	165703052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
Isoform_90680_4	chr1	-	1755	6	ISM	ENSMUSG00000026565.19	ENSMUST00000177472.2	2335	13	-14	19102	0	1189	5prime_fragment	FALSE	canonical	3	13	junction_5	3.3466401061363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAACAAAAACAAAA	9694	False	NA	NA	False	NA	NA	NA	165830198	165737702	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
Isoform_90681_129	chr1	-	3910	5	ISM	ENSMUSG00000026564.10	ENSMUST00000085992.4	4018	6	697	-1	697	1	3prime_fragment	FALSE	canonical	3	43	junction_3	2.77263412660235	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCTTCATTCTGGTC	NA	False	NA	-5	True	ATTAAA	-15	NA	165954768	165925720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638
Isoform_90682_18	chr1	-	4015	6	FSM	ENSMUSG00000026564.10	ENSMUST00000192369.6	4045	6	26	4	0	1	multi-exon	FALSE	canonical	1	3	junction_5	17.4768418199628	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCTTCATTCTGGTC	NA	False	NA	-5	True	ATTAAA	-15	NA	165955465	165925720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954769_165955360
Isoform_90683_5	chr1	-	4120	6	FSM	ENSMUSG00000026564.10	ENSMUST00000192369.6	4045	6	-77	2	-77	-2	multi-exon	FALSE	canonical	1	3	junction_5	17.4768418199628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCATTCTGGTCAT	NA	False	NA	-3	True	ATTAAA	-17	NA	165955568	165925718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954769_165955360
Isoform_90684_5	chr1	-	4118	7	NNC	ENSMUSG00000026564.10	novel	4045	6	NA	NA	-10486	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	20.9900770206622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCTTCATTCTGGT	NA	False	NA	-6	True	ATTAAA	-14	NA	165965977	165925721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954769_165955360_165955477_165965884
Isoform_90685_7	chr1	-	4021	6	FSM	ENSMUSG00000026564.10	ENSMUST00000085992.4	4018	6	-2	-1	-2	1	multi-exon	FALSE	canonical	2	3	junction_5	17.4768418199628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCTTCATTCTGGTC	NA	False	NA	-5	True	ATTAAA	-15	NA	165955467	165925720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954773_165955360
Isoform_90686_18	chr1	-	1540	12	FSM	ENSMUSG00000040629.9	ENSMUST00000038782.4	1546	12	4	2	4	-2	multi-exon	FALSE	canonical	3	15	junction_10	4.55453638177285	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGGCACTCTTGCTTG	NA	False	NA	-9	True	ATTAAA	-20	NA	166066309	166028955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_166029305_166029843_166029920_166032358_166032492_166033421_166033485_166053158_166053301_166053405_166053461_166054134_166054260_166061733_166061776_166062969_166063126_166064441_166064542_166065831_166065925_166066103
Isoform_9069_11	chr10	+	192	2	Intergenic	novelGene_834	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGACTAAACCT	NA	False	NA	NA	False	NA	NA	NA	43399795	43400007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_43399955_43399974
Isoform_90699_948	chr1	-	4461	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	262	8	-174	-8	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTCACTCCTTTGTGGG	NA	False	NA	-8	True	AATAAA	-24	NA	167112627	167050459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
Isoform_9070_128	chr10	+	559	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	2	2	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCGGTGGTCATGGTG	NA	False	NA	NA	False	AATAAA	-44	NA	43400081	43400640	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_43400100_43400600
Isoform_90700_565	chr1	-	4548	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	175	8	175	-8	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTCACTCCTTTGTGGG	NA	False	NA	-8	True	AATAAA	-24	NA	167112714	167050459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
Isoform_90701_105	chr1	-	4591	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	140	0	140	0	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTGTGGGTGCCTGGT	NA	False	NA	0	True	AATAAA	-32	NA	167112749	167050451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
Isoform_9071_3	chr10	-	177	1	Intergenic	novelGene_835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	43430356	43430179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_43430200_43430400
Isoform_9072_3	chr10	-	181	1	Intergenic	novelGene_836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAAGAATGT	9372	False	NA	NA	False	NA	NA	NA	43447172	43446991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_43447000_43447200
Isoform_90721_432	chr1	-	651	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	28	418	28	-418	multi-exon	FALSE	canonical	3	373	junction_1	22.7912263820971	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCCTGCCTGCATCTC	4984	False	NA	-3	True	AATAAA	-28	NA	167221382	167199952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
Isoform_90724_91	chr1	-	2060	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	8	0	-2	0	multi-exon	FALSE	canonical	3	87	junction_14	29.0531708199618	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169358989	169325879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
Isoform_90725_49	chr1	-	2091	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	-23	0	13	0	multi-exon	FALSE	canonical	3	87	junction_14	29.0531708199618	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169359020	169325879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
Isoform_90726_3	chr1	-	2624	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	-39	-517	-3	140	multi-exon	TRUE	canonical	3	87	junction_14	29.0531708199618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACAAGAAAATCAAGAA	NA	False	NA	NA	False	NA	NA	NA	169359036	169325362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
Isoform_90727_46	chr1	-	2004	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	24	377	-12	0	multi-exon	FALSE	canonical	3	65	junction_13	32.5556419455247	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169359009	169325879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
Isoform_90728_48	chr1	-	1971	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	57	377	4	0	multi-exon	FALSE	canonical	3	65	junction_13	32.5556419455247	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169358976	169325879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
Isoform_9073_17	chr12	+	173	1	Intergenic	novelGene_2383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGTAGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	3570335	3570508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_3570300_3570500
Isoform_90730_5	chr1	-	1276	11	FSM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	-2	-3	-2	3	multi-exon	FALSE	canonical	3	87	junction_10	33.1324614238061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTGTGGGTTTTTTTG	NA	False	NA	0	True	AATACA	-18	NA	169358982	169337682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
Isoform_90731_6	chr1	-	1191	10	ISM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	56	12184	3	-1	5prime_fragment	FALSE	canonical	3	65	junction_9	38.1284379142101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAAGTGTGGGTTTT	NA	False	NA	-4	True	AATACA	-14	NA	169358977	169337686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
Isoform_90736_47	chr1	-	4532	10	NNC	ENSMUSG00000026675.13	novel	4612	9	NA	NA	50	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	20.917828652983	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTTAGACTCAGTT	NA	False	NA	-6	True	AATAAA	-13	NA	169796760	169777108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_169777761_169777785_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
Isoform_90740_13	chr1	-	1375	9	NNC	ENSMUSG00000026675.13	novel	1446	8	NA	NA	50	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.8885672212687	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTCTCTGTGATCTTA	NA	False	NA	NA	False	AATAAA	-25	NA	169796760	169783068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_169783137_169783158_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
Isoform_90741_196	chr1	-	2250	11	FSM	ENSMUSG00000026670.16	ENSMUST00000027981.8	2283	11	34	-1	-26	0	multi-exon	FALSE	canonical	3	59	junction_3	76.9519330491444	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	170002481	169969570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_169970142_169970965_169971033_169975564_169975613_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
Isoform_90744_547	chr1	-	2311	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	-24	0	-13	0	multi-exon	FALSE	canonical	3	181	junction_3	44.8905335232274	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	170002539	169969570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
Isoform_90749_146	chr1	-	2260	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	-13	64	-13	0	multi-exon	FALSE	canonical	3	102	junction_2	66.4981202741852	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	170002539	169969570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
Isoform_90754_117	chr1	-	7855	8	FSM	ENSMUSG00000026667.15	ENSMUST00000027979.14	7864	8	-2	11	-2	-11	multi-exon	FALSE	canonical	3	88	junction_5	8.63311138842179	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGAAGTGCTCTCT	NA	False	NA	NA	False	AATAAA	-7	NA	170042968	170020999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
Isoform_90757_5	chr1	-	7779	7	FSM	ENSMUSG00000026667.15	ENSMUST00000123399.2	7775	7	-4	0	-4	0	multi-exon	FALSE	canonical	2	4	junction_1	39.1237353363232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTCTTATTTCTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	170042970	170020988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170027583_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
Isoform_90758_4	chr1	+	4272	2	Antisense	novelGene_ENSMUSG00000026667.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	170035490	170040775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_170038791_170039803
Isoform_90759_62	chr1	-	4512	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	3	2731	3	-2731	multi-exon	FALSE	canonical	3	52	junction_10	11.1705963234835	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAATGGCTCAGTGGTTA	NA	False	NA	NA	False	AATAAA	-10	NA	170695337	170534973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
Isoform_9076_3	chr10	+	225	1	Intergenic	novelGene_714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGGAAATAGCAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	5765027	5765252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_5765000_5765300
Isoform_90764_14	chr1	-	7222	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	21	3	21	-3	multi-exon	FALSE	canonical	3	52	junction_10	11.1705963234835	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGTCTGTACAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	170695319	170532245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
Isoform_90765_5	chr1	-	4560	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	-45	2731	-45	-2731	multi-exon	FALSE	canonical	3	52	junction_10	11.1705963234835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAATGGCTCAGTGGTTA	NA	False	NA	NA	False	AATAAA	-10	NA	170695385	170534973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
Isoform_90767_24	chr1	-	4521	16	NNC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	0	-2722	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	17.5630926155453	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGGTTAACTTCGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	170695340	170534964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_170537657_170574674_170574760_170614914_170615027_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
Isoform_9077_14	chr10	+	184	1	Intergenic	novelGene_837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTTTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	44005419	44005603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_44005400_44005600
Isoform_90771_238	chr1	-	1278	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	96	0	13	0	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	170713013	170701756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
Isoform_90772_4	chr1	-	1463	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	107	-196	24	196	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGGATACTTCTTGGT	NA	False	NA	-1	True	TTTAAA	-8	NA	170713002	170701560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
Isoform_90773_133	chr1	-	1278	6	FSM	ENSMUSG00000026659.14	ENSMUST00000166393.2	911	6	-35	-332	-24	0	multi-exon	FALSE	canonical	3	124	junction_5	89.0002247188174	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	170713000	170701756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708611_170712635
Isoform_90776_9	chr1	-	1444	7	FSM	ENSMUSG00000026656.16	ENSMUST00000081103.12	1462	7	10	8	10	-8	multi-exon	FALSE	canonical	3	21	junction_6	22.7943706500823	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAACCATCTTTCTAT	NA	False	NA	NA	False	AGTAAA	-9	NA	170803686	170788134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469
Isoform_90778_93	chr1	-	1296	3	FSM	ENSMUSG00000059498.14	ENSMUST00000168817.2	1298	3	-23	25	-23	-4	multi-exon	FALSE	canonical	3	151	junction_2	7.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAAAAAATCAACGGT	NA	False	NA	-32	True	NA	NA	NA	170885646	170878767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170879422_170881507_170881763_170885259
Isoform_90779_77	chr1	-	1298	3	FSM	ENSMUSG00000059498.14	ENSMUST00000168817.2	1298	3	4	-4	4	4	multi-exon	FALSE	canonical	3	151	junction_2	7.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTTTTGGTGACTTCT	NA	False	NA	-3	True	AATAAA	-28	NA	170885619	170878738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170879422_170881507_170881763_170885259
Isoform_9078_4	chr10	+	4872	1	Antisense	novelGene_ENSMUSG00000038151.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATTTAAAAAGAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	44317246	44322118	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_44317200_44322100
Isoform_90781_8	chr1	-	1192	4	ISM	ENSMUSG00000059498.14	ENSMUST00000164044.8	1347	5	793	24	-556	-4	3prime_fragment	FALSE	canonical	3	16	junction_3	67.4536878161602	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAAAAAATCAACGGT	NA	False	NA	-32	True	NA	NA	NA	170886179	170878767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_170879422_170881507_170881763_170885259_170885518_170886154
Isoform_90782_5	chr1	-	1617	7	NNC	ENSMUSG00000059498.14	novel	1347	5	NA	NA	-1310	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	70.3980744686166	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAAAAAATCAACGGT	NA	False	NA	-32	True	NA	NA	NA	170888282	170878767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_170879422_170881507_170881763_170885259_170885518_170886154_170886176_170886837_170886964_170887195_170887296_170888079
Isoform_90786_25	chr1	-	1234	6	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	1	242	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	366.673369635702	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGACTCTTTGGAATC	472	False	NA	-7	True	ATTAAA	-15	NA	170978156	170956733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978048
Isoform_90787_1062	chr1	-	1172	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	0	1999	0	243	multi-exon	FALSE	canonical	3	578	junction_5	147.434866975217	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
Isoform_9079_204	chr10	+	177	1	Intergenic	novelGene_715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5766384	5766561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_5766400_5766600
Isoform_90792_14	chr1	-	1009	5	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	244	combination_of_known_splicesites	TRUE	canonical	3	17	junction_1	373.85324660888	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGACTCTTTGGAATCTA	456	False	NA	-5	True	ATTAAA	-17	NA	170978172	170956731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_170957475_170966262_170966325_170971126_170971229_170973324_170973382_170978127
Isoform_90793_3	chr1	-	1058	3	FSM	ENSMUSG00000038370.7	ENSMUST00000111332.2	1577	3	32	487	32	-487	multi-exon	FALSE	canonical	1	2	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	171023805	171001317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171002095_171003138_171003194_171023579
Isoform_90798_8	chr1	-	1342	10	NIC	ENSMUSG00000005674.10	novel	4712	10	NA	NA	0	-852	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	36.8945778745768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTTATTTTTGTT	9575	False	NA	-12	True	AGTAAA	-41	NA	171050017	171046783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049623_171049943
Isoform_90799_112	chr1	-	1546	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	66	3100	0	-748	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGGTTTCTCCATT	9575	False	NA	92	True	AAAAAG	-13	NA	171050017	171046679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
Isoform_90800_7	chr1	-	2855	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	66	1791	0	0	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGTTTCACAGATCC	9575	False	NA	NA	False	AGTAAA	-16	NA	171050017	171045370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
Isoform_90801_17	chr1	-	1612	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	0	3100	0	-748	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGGTTTCTCCATT	9509	False	NA	92	True	AAAAAG	-13	NA	171050083	171046679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
Isoform_90814_2633	chr1	-	1600	13	FSM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	17	6	17	-6	multi-exon	FALSE	canonical	3	1142	junction_12	107.460457843804	2633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAGCTTGTAATGTGTC	NA	False	NA	-7	True	ATTAAA	-22	NA	171074674	171062427	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
Isoform_9082_4	chr10	-	177	1	Intergenic	novelGene_838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTAAGTGCTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	45020188	45020011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_45020000_45020200
Isoform_90821_63	chr1	-	1820	13	FSM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	1	0	1	0	multi-exon	FALSE	canonical	3	37	junction_8	32.2076595444831	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5190	False	NA	-15	True	AGTAAA	-16	NA	171108759	171104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_90824_3	chr1	-	2771	14	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	27	7	intron_retention	TRUE	non_canonical	0	0	junction_1	38.3478319206934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATTTTCCTCATTTCCT	5216	False	NA	NA	False	AATAAA	-19	NA	171108733	171103555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_171104392_171104423_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_90825_4	chr1	-	1954	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	37	junction_8	30.7939030135824	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171108097_171108247_171108343_171108446
Isoform_90826_7	chr1	-	2092	11	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	37	junction_8	28.8272440583556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171108097_171108247_171108343_171108446
Isoform_90827_5	chr1	-	1573	11	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	36.54257790578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107961_171108097_171108247_171108343_171108446
Isoform_90828_6	chr1	-	2116	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	42	junction_9	30.0522960165736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_90829_10	chr1	-	2254	11	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	42	junction_8	27.874002224295	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_90830_29	chr1	-	2341	10	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-26	-3	intron_retention	FALSE	canonical	3	53	junction_6	23.0656604361988	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCTCTTTACTATT	5230	False	NA	-18	True	AGTAAA	-13	NA	171108719	171104567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171108097_171108247_171108343_171108446
Isoform_90832_4	chr1	-	2698	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	37	junction_7	32.0949006016236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5240	False	NA	-15	True	AGTAAA	-16	NA	171108709	171104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_90835_10	chr1	-	3180	10	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	42	junction_7	25.6471787488951	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5190	False	NA	-15	True	AGTAAA	-16	NA	171108759	171104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_90836_49	chr1	-	3310	9	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	87	junction_7	17.1386806668425	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCTCTTTACTATTC	5190	False	NA	-17	True	AGTAAA	-14	NA	171108759	171104566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
Isoform_90839_6	chr1	-	3446	8	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	87	junction_6	17.9261523695273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5190	False	NA	-15	True	AGTAAA	-16	NA	171108759	171104564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171106888_171107003_171108097_171108247_171108343_171108446
Isoform_90840_8	chr1	-	3412	8	FSM	ENSMUSG00000062729.13	ENSMUST00000155083.9	4412	8	-1	1001	-1	1	multi-exon	FALSE	canonical	3	87	junction_6	18.2633792165679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTTACTATTCATC	5188	False	NA	-14	True	AGTAAA	-17	NA	171108761	171104563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171104773_171104858_171104902_171105019_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
Isoform_90841_3	chr1	-	3501	7	NIC	ENSMUSG00000062729.13	novel	4412	8	NA	NA	-26	-2	intron_retention	FALSE	canonical	3	87	junction_5	19.3362066830309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCTCTTTACTATTC	5230	False	NA	-17	True	AGTAAA	-14	NA	171108719	171104566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171104773_171104858_171104902_171105019_171105378_171105454_171106888_171107003_171108097_171108247_171108343_171108446
Isoform_90844_1319	chr1	-	2158	13	FSM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	52	9	-15	4	multi-exon	FALSE	non_canonical	0	0	junction_3	116.920794652714	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115512	171109527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
Isoform_90845_168	chr1	-	2181	13	FSM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	29	9	-3	4	multi-exon	FALSE	non_canonical	0	0	junction_3	116.920794652714	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115535	171109527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
Isoform_90847_40	chr1	-	1895	13	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	-13	4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	150.066721272017	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115510	171109527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171114183_171114544_171115334
Isoform_90849_58	chr1	-	2114	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	0	4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	156.020077114485	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115528	171109527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113922_171114544_171115334
Isoform_90850_25	chr1	-	2371	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	15	4	intron_retention	FALSE	canonical	3	297	junction_10	47.5590976427754	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115513	171109527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171109877_171110070_171110186_171110268_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
Isoform_90858_21	chr1	-	1007	7	FSM	ENSMUSG00000062963.11	ENSMUST00000144576.8	822	7	-54	-131	-8	0	multi-exon	FALSE	canonical	3	36	junction_3	228.930423685645	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7312	False	NA	0	True	AATAAA	-18	NA	171122568	171116135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117427_171117521_171117721_171117790_171122206_171122401_171122493
Isoform_90863_226	chr1	-	978	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	29	0	-8	0	multi-exon	FALSE	canonical	3	257	junction_6	130.826539101718	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7312	False	NA	0	True	AATAAA	-18	NA	171122568	171116135	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
Isoform_90865_31	chr1	-	1881	6	ISM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	23	-2	3	2	intron_retention	FALSE	canonical	3	103	junction_4	16.4608626748418	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGACATGTCTTTTG	902	False	NA	-8	True	AATATA	-10	NA	171173190	171169809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481
Isoform_90867_8	chr1	-	3546	6	ISM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	24	6	3	-6	intron_retention	FALSE	canonical	3	103	junction_4	16.4608626748418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTCTGTCTTGACTT	902	False	NA	-4	True	ATTAAA	-17	NA	171173190	171168144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481
Isoform_90868_4	chr1	-	3380	7	NIC	ENSMUSG00000013997.11	novel	3041	7	NA	NA	1	-4	intron_retention	FALSE	canonical	3	10	junction_6	48.6646689087679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGTCTTGACTTGG	880	False	NA	-2	True	ATTAAA	-19	NA	171173212	171168142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172758
Isoform_90869_25	chr1	-	1689	7	NIC	ENSMUSG00000013997.11	novel	1335	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	10	junction_6	48.6646689087679	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	902	False	NA	-10	True	AATATA	-8	NA	171173190	171169811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172758
Isoform_90870_30	chr1	-	1362	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	6	1673	0	0	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	884	False	NA	-10	True	AATATA	-8	NA	171173208	171169811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
Isoform_90871_3	chr1	-	3011	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	30	0	9	0	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTGACTTGGTTCA	908	False	NA	2	True	ATTAAA	-23	NA	171173184	171168138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
Isoform_90872_18	chr1	-	2998	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	9	-1672	4	-1	multi-exon	TRUE	canonical	3	74	junction_6	27.0025718939676	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTCTTGACTTGGTTC	888	False	NA	1	True	ATTAAA	-22	NA	171173204	171168139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
Isoform_90873_150	chr1	-	1331	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	4	0	-1	0	multi-exon	FALSE	canonical	3	74	junction_6	27.0025718939676	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	883	False	NA	-10	True	AATATA	-8	NA	171173209	171169811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
Isoform_90876_11	chr1	-	1979	5	FSM	ENSMUSG00000013997.11	ENSMUST00000141357.2	2932	5	18	935	3	-20	multi-exon	FALSE	canonical	3	137	junction_3	5.87367006223537	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATATAATAATCA	902	False	NA	-30	True	NA	NA	NA	171173190	171169831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171172108_171172481
Isoform_90877_3	chr1	-	2260	4	NIC	ENSMUSG00000013997.11	novel	1335	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	139	junction_2	5.90668171555645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	877	False	NA	-10	True	AATATA	-8	NA	171173215	171169811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_171170366_171171005_171171132_171171261_171172108_171172481
Isoform_90878_22	chr1	-	1283	4	FSM	ENSMUSG00000045259.5	ENSMUST00000061878.5	1558	4	1	274	1	-274	multi-exon	FALSE	canonical	3	17	junction_1	1.88561808316413	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTTTTGTCTCTGAAT	7872	False	NA	NA	False	ATTAAA	-9	NA	171188365	171186287	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171186549_171187022_171187222_171187309_171187470_171187702
Isoform_9088_3	chr10	-	4168	1	Genic_Genomic	ENSMUSG00000063804.9	novel	NA	NA	NA	NA	217	-25428	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45362274	45358106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_45358100_45362300
Isoform_90882_321	chr1	-	2269	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	9	3420	9	49	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAATACCTGGGAACCA	NA	False	NA	-19	True	GATAAA	-6	NA	171854853	171831946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
Isoform_90897_45	chr1	-	2903	18	FSM	ENSMUSG00000003458.13	ENSMUST00000140643.8	3016	18	106	7	106	-7	multi-exon	FALSE	canonical	3	15	junction_16	166.01196438311	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTACTTGTTGTTTGGT	9102	False	NA	43	True	ATTAAA	-14	NA	171910256	171893586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171903192_171903308_171908778_171908884_171910167
Isoform_90901_1560	chr1	-	2791	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	103	7	103	-7	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTACTTGTTGTTTGGT	9099	False	NA	43	True	ATTAAA	-14	NA	171910259	171893586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
Isoform_90902_134	chr1	-	2862	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	32	7	32	-7	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTACTTGTTGTTTGGT	9028	False	NA	43	True	ATTAAA	-14	NA	171910330	171893586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
Isoform_90909_108	chr1	-	2407	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	94	0	-13	0	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTCTAGAATCT	NA	False	NA	-4	True	AATAAA	-20	NA	172034277	172024294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
Isoform_90917_8	chr1	-	2737	17	ISM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	8560	2774	8560	60	3prime_fragment	FALSE	canonical	3	101	junction_15	22.0204982629822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTCTGCTACATTTTC	NA	False	NA	-2	True	NA	NA	NA	172117071	172102049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867
Isoform_90926_123	chr1	-	3388	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	65	2774	65	60	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTCTGCTACATTTTC	NA	False	NA	-2	True	NA	NA	NA	172125566	172102049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
Isoform_90929_11	chr1	-	6162	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	65	0	65	0	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGGCCTGGGTTCTTG	NA	False	NA	0	True	AATAAA	-28	NA	172125566	172099275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
Isoform_9093_5	chr10	+	356	1	FSM	ENSMUSG00000110841.2	ENSMUST00000217344.2	782	1	407	19	407	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	45751807	45752163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_45751800_45752200
Isoform_90939_1476	chr1	-	1596	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	31	1009	31	1	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	1476	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGACCTTTTTAAAATT	823	False	NA	-21	True	AATAAA	-32	NA	175453170	175428948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
Isoform_9094_5	chr10	+	286	1	FSM	ENSMUSG00000110841.2	ENSMUST00000217344.2	782	1	499	-3	499	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGATACACAAAATGACA	NA	False	NA	NA	False	AATAAA	-37	NA	45751899	45752185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_45751900_45752200
Isoform_90942_26	chr1	-	1788	4	FSM	ENSMUSG00000026525.10	ENSMUST00000027809.8	1913	4	119	6	119	-6	multi-exon	FALSE	canonical	3	10	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAGGCTGTTGTCATGT	NA	False	NA	NA	False	AATAAA	-24	NA	175520223	175489992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_175490721_175491092_175491345_175492875_175493196_175519735
Isoform_90943_38	chr1	-	6927	2	FSM	ENSMUSG00000078185.4	ENSMUST00000104984.4	6905	2	-27	5	-27	-5	multi-exon	FALSE	canonical	3	18	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGGTGTGCTCAATTG	NA	False	NA	-2	True	AATAAA	-12	NA	175520223	175509807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_175516247_175519735
Isoform_90947_3	chr1	-	5260	14	FSM	ENSMUSG00000019699.17	ENSMUST00000111159.2	4906	14	-672	318	-672	-318	multi-exon	FALSE	canonical	3	17	junction_13	3.68910117177901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTCACCTCCCTGT	NA	False	NA	-2	True	AATAAA	-20	NA	177086441	176849999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085711
Isoform_90948_5	chr1	-	5087	15	NNC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	-203	-1	at_least_one_novel_splicesite	TRUE	non_canonical	1	5	junction_13	5.65505011796843	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTCTCTGTTTGTTGTT	NA	False	NA	-9	True	AATAAA	-17	NA	177085972	176849682	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076358_177076378_177076448_177085711
Isoform_90956_1264	chr1	-	2532	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	25	214	15	0	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624052	177590741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
Isoform_90959_54	chr1	-	2691	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	-134	214	-134	0	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624211	177590741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
Isoform_9097_3	chr10	+	164	1	Intergenic	novelGene_716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAACTTAAACACACTG	NA	False	NA	NA	False	NA	NA	NA	6011853	6012017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_6011900_6012000
Isoform_9098_17	chr10	+	177	1	Intergenic	novelGene_839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTAACAAATTA	NA	False	NA	NA	False	NA	NA	NA	46676294	46676471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_46676300_46676500
Isoform_90983_6	chr1	-	2133	2	FSM	ENSMUSG00000039630.11	ENSMUST00000159117.2	2640	2	504	3	504	-3	multi-exon	FALSE	canonical	3	124	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACTTGCTTCTCTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	178151232	178148675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178150761_178151184
Isoform_90988_3	chr1	-	4493	2	FSM	ENSMUSG00000039630.11	ENSMUST00000159117.2	2640	2	-1853	0	-1853	0	multi-exon	FALSE	canonical	3	124	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGCTTCTCTTGTTTT	NA	False	NA	-1	True	ATTAAA	-22	NA	178153589	178148672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178150761_178151184
Isoform_90989_6	chr1	-	3990	2	FSM	ENSMUSG00000039630.11	ENSMUST00000159117.2	2640	2	-1352	2	-1352	-2	multi-exon	FALSE	canonical	3	124	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTTGCTTCTCTTGTT	NA	False	NA	-3	True	ATTAAA	-20	NA	178153088	178148674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178150761_178151184
Isoform_91_270	ERCC-00076	+	625	1	FSM	ERCC-00076A	DQ883650	626	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00076_+_0_600
Isoform_9103_23	chr7	+	177	1	Intergenic	novelGene_10405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTTAT	NA	False	NA	NA	False	NA	NA	NA	130419279	130419456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_130419300_130419500
Isoform_9104_7	chr7	-	202	1	Intergenic	novelGene_10383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACCAACAAAAAAAGAA	9943	False	NA	NA	False	NA	NA	NA	127438693	127438491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_127438500_127438700
Isoform_9106_26	chr10	+	179	1	Intergenic	novelGene_841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGAGTATAATTC	801	False	NA	NA	False	NA	NA	NA	50903895	50904074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_50903900_50904100
Isoform_91068_4957	chr1	-	3399	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	14	4227	14	3296	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGTTGTCTAATGGGA	NA	False	NA	-7	True	ATTAAA	-14	NA	178165348	178156134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
Isoform_91069_5292	chr1	-	2935	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	12	4693	12	2830	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	5292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCTTTTATTAAGC	NA	False	NA	-6	True	AGTAAA	-14	NA	178165350	178156600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
Isoform_91072_2169	chr1	-	3672	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	12	3956	12	-3467	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTTGGGATTCTCGC	NA	False	NA	-21	True	AATAAA	-15	NA	178165350	178155863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
Isoform_9109_4	chr10	-	176	1	Intergenic	novelGene_842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGGAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	52127568	52127392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_52127400_52127600
Isoform_9110_10	chr10	+	177	1	FSM	ENSMUSG00000081926.2	ENSMUST00000121411.2	114	1	6	-69	6	69	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATTGGGGCATAAAGC	2125	False	NA	NA	False	AATAAA	-37	NA	6988666	6988843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_6988700_6988800
Isoform_9111_5	chr10	-	174	1	Intergenic	novelGene_843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAACTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	52199662	52199488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_52199500_52199700
Isoform_9112_14	chr10	-	158	1	Intergenic	novelGene_844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	52206188	52206030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_52206000_52206200
Isoform_9113_65	chr10	-	183	1	Intergenic	novelGene_706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATCAAACTACAT	NA	False	NA	NA	False	NA	NA	NA	3885558	3885375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_3885400_3885600
Isoform_91142_237	chr1	-	1566	12	FSM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	15	5290	-14	0	multi-exon	FALSE	canonical	3	343	junction_1	34.6080772113168	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGACTTGGCTTTGCCT	NA	False	NA	-5	True	AATAAA	-26	NA	179345584	178784814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_91143_25	chr1	-	1994	12	FSM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	23	4854	-6	436	multi-exon	FALSE	canonical	3	343	junction_1	34.6080772113168	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAACTCTGGCCTCCA	NA	False	NA	NA	False	AATACA	-23	NA	179345576	178784378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_91144_351	chr1	-	1530	12	FSM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	51	5290	22	0	multi-exon	FALSE	canonical	3	343	junction_1	34.6080772113168	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGACTTGGCTTTGCCT	NA	False	NA	-5	True	AATAAA	-26	NA	179345548	178784814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_91147_12	chr1	-	2746	12	FSM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	23	4102	-6	-911	multi-exon	FALSE	canonical	3	343	junction_1	34.6080772113168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGACTCCTTCACTGGG	NA	False	NA	NA	False	NA	NA	NA	179345576	178783626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_9115_7	chr10	+	346	1	Intergenic	novelGene_717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCAACTGCCCTCTT	NA	False	NA	NA	False	TATAAA	-38	NA	7018869	7019215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_7018900_7019200
Isoform_91152_15	chr1	-	2364	7	ISM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	53	139274	24	-133984	5prime_fragment	FALSE	canonical	3	351	junction_5	36.8076833766478	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTTGGCCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	179345546	178918798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_91154_19	chr1	-	2025	6	FSM	ENSMUSG00000055067.16	ENSMUST00000111134.2	1229	6	29	-825	-7	825	multi-exon	FALSE	canonical	2	9	junction_1	165.062412438447	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTTTTTTTCCTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	179345577	179221963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179223397_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_91156_29	chr1	-	2474	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	-26	1	-26	-1	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7852	False	NA	NA	False	AATAAA	-14	NA	179373858	179355620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
Isoform_91157_35	chr1	-	2422	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	26	1	-24	-1	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7904	False	NA	NA	False	AATAAA	-14	NA	179373806	179355620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
Isoform_9116_3	chr10	+	174	1	Intergenic	novelGene_845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACTTGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	52251181	52251355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_52251200_52251400
Isoform_91161_5	chr1	-	2333	7	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-24	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	27.6008252694653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7904	False	NA	NA	False	AATAAA	-14	NA	179373806	179355620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179373386
Isoform_91170_103	chr1	-	7292	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	17	1197	17	0	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179631228	179573655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
Isoform_91172_37	chr1	-	8483	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	17	6	17	-6	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATACTGTCAAGTTAA	NA	False	NA	-7	True	AATAAA	-13	NA	179631228	179572464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
Isoform_91175_10	chr1	-	7500	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	-189	1195	-189	2	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCTGGTAGATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	179631434	179573653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
Isoform_91184_8	chr1	-	1123	2	FSM	ENSMUSG00000026491.14	ENSMUST00000147137.2	746	2	-67	-310	7	304	multi-exon	FALSE	canonical	3	284	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTCATAAGGGGTAGGA	NA	False	NA	NA	False	NA	NA	NA	179631238	179626101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179626904_179630917
Isoform_91185_45	chr1	-	2616	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	34	1376	-5	405	multi-exon	FALSE	canonical	3	14	junction_5	4.06390281902126	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTATGCGTTCCGTGAA	3899	False	NA	-2	True	AATAAA	-22	NA	180023551	179994178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
Isoform_91186_3	chr1	-	2695	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	6	1325	6	456	multi-exon	FALSE	canonical	3	14	junction_5	4.06390281902126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGTGGTCTTTGTCT	3871	False	NA	49	True	NA	NA	NA	180023579	179994127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
Isoform_91188_3	chr1	-	2647	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	55	1324	-4	457	multi-exon	FALSE	canonical	3	14	junction_5	4.06390281902126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTGTGGTCTTTGTCTG	3920	False	NA	50	True	NA	NA	NA	180023530	179994126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
Isoform_91189_3	chr1	-	1483	11	NIC	ENSMUSG00000010609.16	novel	1997	11	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	10.5943381105192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAGAAGAAAAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	180083807	180055029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_180055294_180056407_180056527_180056945_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
Isoform_91192_21	chr1	-	1939	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	56	2	0	0	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGGTGTTTGGCCCCT	NA	False	NA	0	True	AATAAA	-17	NA	180083809	180054570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
Isoform_91193_36	chr1	-	1480	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	56	461	0	3	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAGAAGAAAAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	180083809	180055029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
Isoform_91194_12	chr1	-	1992	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	4	1	4	-1	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTGTTTGGCCCCTT	NA	False	NA	1	True	AATAAA	-18	NA	180083861	180054569	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
Isoform_91196_5	chr1	-	1482	2	FSM	ENSMUSG00000103156.2	ENSMUST00000193209.2	600	2	50	-932	50	932	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTGGTTATAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	180596171	180590129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180591486_180596045
Isoform_91200_1088	chr1	-	1036	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	71	1734	-14	131	multi-exon	TRUE	canonical	3	2337	junction_3	156.5907617539	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTCTGGTCTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	180641126	180630130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
Isoform_91204_47	chr1	-	919	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	32	1890	3	-25	multi-exon	FALSE	canonical	3	2337	junction_3	156.5907617539	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAATGGTGTTTGTAGCA	NA	False	NA	NA	False	AGTAAA	-17	NA	180641165	180630286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
Isoform_91209_107	chr1	-	1700	9	FSM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	38	3	38	-3	multi-exon	FALSE	canonical	3	106	junction_5	19.7214984217731	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGGGCCAGATAC	5766	False	NA	-6	True	GATAAA	-15	NA	180845096	180817121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
Isoform_91212_5	chr1	-	4047	7	NIC	ENSMUSG00000038776.14	novel	1741	9	NA	NA	68	-3	intron_retention	FALSE	canonical	3	106	junction_3	19.4543625498813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGGGCCAGATAC	5796	False	NA	-6	True	GATAAA	-15	NA	180845066	180817121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_180817546_180817957_180818084_180819497_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
Isoform_91216_474	chr1	-	3093	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	18	6281	18	-160	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATCTATTAACATCTGAA	NA	False	NA	-2	True	AATAAA	-21	NA	180971751	180920983	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_91217_163	chr1	-	3712	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	17	5663	17	458	multi-exon	TRUE	canonical	3	480	junction_18	71.7805568876937	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACACCTTTCTGATAGAC	NA	False	NA	-23	True	TATAAA	-18	NA	180971752	180920365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_91218_270	chr1	-	3535	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	18	5839	18	282	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGCCATGCCAGA	NA	False	NA	-26	True	GATAAA	-32	NA	180971751	180920541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_91229_14	chr1	-	3656	21	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	48	8843	48	1	5prime_fragment	FALSE	canonical	3	480	junction_16	74.1277781941426	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	180971721	180923545	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_91232_18	chr1	-	1980	14	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	18	26835	18	-17991	5prime_fragment	FALSE	canonical	3	480	junction_9	88.1404876440457	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTATGAGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	180971751	180941537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_91238_5	chr1	-	5267	6	ISM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	25368	-4	-1673	0	3prime_fragment	FALSE	canonical	3	146	junction_4	6.30555310817378	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCGTTGCGTTCCATC	3884	False	NA	-3	True	AATAAA	-19	NA	181013634	181000792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512
Isoform_91241_14	chr1	-	3172	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	-10	3883	-10	-14	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTCATTTGTA	NA	False	NA	-34	True	AATAAA	-20	NA	181039553	181004675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
Isoform_91242_11	chr1	-	6967	16	NNC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.1627601362475	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTCTCGTTGCGTTCCA	NA	False	NA	-5	True	AATAAA	-17	NA	181039541	181000794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_181001379_181001418_181001680_181001713_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
Isoform_91243_6	chr1	-	5229	14	FSM	ENSMUSG00000038733.15	ENSMUST00000237749.2	7068	14	-13	1852	-13	-1848	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACTGGTTATTAGTGG	NA	False	NA	-4	True	ATTAAA	-16	NA	181039579	181002644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
Isoform_91245_18	chr1	-	3111	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	-539	3880	2	-15	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTGACTTCATTTGT	NA	False	NA	-35	True	AATAAA	-19	NA	181039541	181004676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
Isoform_91249_18	chr1	-	6958	16	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.3619965294383	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATTCTCGTTGCGTTCC	NA	False	NA	-6	True	AATAAA	-16	NA	181039581	181000795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_181001379_181001418_181001680_181001713_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
Isoform_9125_6	chr10	+	174	1	Intergenic	novelGene_847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTAAAGAAGCCA	NA	False	NA	NA	False	NA	NA	NA	53267750	53267924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_53267800_53267900
Isoform_91252_20	chr1	-	6935	15	NNC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	26	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.8588690128569	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCGTTGCGTTCCATC	NA	False	NA	-3	True	AATAAA	-19	NA	181039517	181000792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_181001680_181001715_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
Isoform_91255_3	chr1	-	6376	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	81	-5	70	1	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCGTTGCGTTCCATCT	NA	False	NA	-2	True	AATAAA	-20	NA	181038921	181000791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
Isoform_91256_12	chr1	-	2690	14	NIC	ENSMUSG00000038733.15	novel	751	6	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	42.1032824199319	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTTACAGATTGTTTT	NA	False	NA	NA	False	AGTAAA	-20	NA	181039551	181007972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
Isoform_91257_32	chr1	-	2628	14	NIC	ENSMUSG00000038733.15	novel	751	6	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	34.0406996222056	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAATGACTTACAGATTG	NA	False	NA	NA	False	AGTAAA	-16	NA	181039541	181007976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
Isoform_9126_3	chr10	-	180	1	Intergenic	novelGene_848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCGTGGTGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	53324580	53324400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_53324400_53324600
Isoform_9128_7	chr10	-	776	1	NIC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	-7	-20353	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	GATAAA	-26	NA	53506062	53505286	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_53505300_53506100
Isoform_91287_4279	chr1	-	3502	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	28	-20	10	20	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	4279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669916	181642879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
Isoform_91288_1528	chr1	-	3524	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	5	-19	5	19	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669939	181642880	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
Isoform_9129_272	chr4	-	174	1	Intergenic	novelGene_8296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTTTAAAAAAAAAAAAAGAA	3386	False	NA	NA	False	NA	NA	NA	155394683	155394509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_-_155394500_155394700
Isoform_9130_18	chr10	+	157	1	Intergenic	novelGene_849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATAAATAAATATTA	NA	False	NA	NA	False	NA	NA	NA	55003351	55003508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_55003400_55003500
Isoform_91309_8	chr1	-	4424	16	NNC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	-2	857	intron_retention	FALSE	non_canonical	0	0	junction_1	145.366143085505	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTGTATCTGTATCCT	5641	False	NA	-4	True	NA	NA	NA	181847547	181731107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_181731960_181731989_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_91310_7	chr1	-	5009	16	NNC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	-2	1442	intron_retention	FALSE	non_canonical	0	0	junction_1	145.366143085505	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTTTGTGACACT	5641	False	NA	-22	True	AATAAA	-16	NA	181847547	181730522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_181731960_181731989_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_91326_161	chr1	-	4944	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-1	1441	intron_retention	FALSE	non_canonical	0	0	junction_1	105.627377403507	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5642	False	NA	-23	True	AATAAA	-15	NA	181847546	181730523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_181731960_181731989_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_91331_7	chr1	-	4431	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-77	842	intron_retention	FALSE	non_canonical	0	0	junction_1	105.627377403507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGACATTGGCTCATG	5556	False	NA	-19	True	NA	NA	NA	181847632	181731122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_181731960_181731989_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_91335_7	chr1	-	5060	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-87	1461	intron_retention	FALSE	non_canonical	0	0	junction_1	105.627377403507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATGGTCTTCTGCAATG	5546	False	NA	-3	True	AATAAA	-35	NA	181847642	181730503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_181731960_181731989_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_9134_26	chr10	+	1746	1	ISM	ENSMUSG00000047669.9	ENSMUST00000063138.8	2140	2	8212	6	214	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTTATAAAGCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	55991224	55992970	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_55991200_55993000
Isoform_91342_15	chr1	-	2626	14	NIC	ENSMUSG00000022995.17	novel	2832	14	NA	NA	-1	7	intron_retention	FALSE	canonical	3	25	junction_9	101.725526984315	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGGGCGCTGATGAAGA	5642	False	NA	-13	True	AATAAA	-28	NA	181847546	181733063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_91344_7	chr1	-	5533	15	NNC	ENSMUSG00000022995.17	novel	4231	15	NA	NA	-1	1838	intron_retention	FALSE	non_canonical	0	0	junction_1	131.162482969695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACTTTAAATGTAGCAG	5642	False	NA	-31	True	ATTAAA	-16	NA	181847546	181730126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_181731960_181731989_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_91348_8	chr1	-	1974	5	ISM	ENSMUSG00000022995.17	ENSMUST00000195059.6	2832	14	-320	17235	-1	451	5prime_fragment	FALSE	canonical	3	327	junction_2	38.0419176698547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTTGTAGAGGATAAATT	5642	False	NA	NA	False	AATAAA	-17	NA	181847546	181750312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_91355_682	chr1	-	1822	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	29	197	29	-197	multi-exon	FALSE	canonical	3	1138	junction_1	20.5	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAGCCTTAGTGGAATTT	NA	False	NA	-10	True	NA	NA	NA	182110340	182103533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_182104459_182106540_182107284_182110186
Isoform_91363_14	chr1	-	3900	2	FSM	ENSMUSG00000038633.6	ENSMUST00000132551.2	1405	2	34	-2529	34	-196	multi-exon	FALSE	canonical	3	1179	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCTTAGTGGAATTTC	NA	False	NA	-9	True	NA	NA	NA	182110335	182103532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_182107284_182110186
Isoform_91367_184	chr1	-	2835	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	2090	0	-4	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTGTCAGCAAGGT	NA	False	NA	-5	True	AATAAA	-11	NA	182169183	182142756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
Isoform_91369_20	chr1	-	4925	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTTCATTCTTTCGA	NA	False	NA	-3	True	AATAAA	-17	NA	182169183	182140666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
Isoform_91370_36	chr1	-	3937	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	988	0	-988	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAACAGCTGGATTTTTT	NA	False	NA	-24	True	AATAAA	-16	NA	182169183	182141654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
Isoform_91373_53	chr1	-	5002	10	FSM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	-19	1	-14	-1	multi-exon	FALSE	canonical	3	35	junction_1	20.4420288428002	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTGTCTCCGTCGTTC	NA	False	NA	1	True	AATAAA	-33	NA	183003068	182867830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
Isoform_91374_4	chr1	-	4911	9	FSM	ENSMUSG00000030768.13	ENSMUST00000195372.2	4901	9	-14	4	-14	-4	multi-exon	FALSE	canonical	3	12	junction_8	30.8666486681013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCACCTGTCTCCGTCG	NA	False	NA	-2	True	AATAAA	-30	NA	183003068	182867833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_183002886
Isoform_91376_6	chr1	-	4467	9	NIC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	33.1886181544216	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTCTCCGTCGTT	NA	False	NA	0	True	AATAAA	-32	NA	183003056	182867831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182955059_182955188_182984515_182984604_183002886
Isoform_91377_44	chr1	-	1427	9	ISM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	4	9926	4	1	5prime_fragment	FALSE	canonical	3	56	junction_6	14.115040736746	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGCCTCTGCCTTGCT	NA	False	NA	-1	True	AATAAA	-14	NA	183003045	182877755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
Isoform_91378_8	chr1	-	1360	8	ISM	ENSMUSG00000030768.13	ENSMUST00000195372.2	4901	9	-12	9926	-12	1	5prime_fragment	FALSE	canonical	3	12	junction_7	29.7170328400452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGCCTCTGCCTTGCT	NA	False	NA	-1	True	AATAAA	-14	NA	183003066	182877755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_183002886
Isoform_91379_3	chr1	-	1299	8	NIC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	31.0430905257153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGCCTCTGCCTTGCT	NA	False	NA	-1	True	AATAAA	-14	NA	183003045	182877755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182984515_182984604_183002886
Isoform_9138_119	chr10	+	174	1	Intergenic	novelGene_718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	7384334	7384508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_7384300_7384500
Isoform_91381_5	chr1	-	3372	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	440	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	34.3655944636527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078096	183057915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078064
Isoform_91382_7	chr1	-	3485	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	463	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	35.3534980233245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078073	183057915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183077928
Isoform_91383_140	chr1	-	3444	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-14	0	-14	0	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078550	183057915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
Isoform_91384_49	chr1	-	3731	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-301	0	-24	0	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078837	183057915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
Isoform_91387_40	chr1	-	3442	14	FSM	ENSMUSG00000046836.14	ENSMUST00000163528.8	3413	14	-27	-2	-14	0	multi-exon	FALSE	canonical	3	26	junction_13	29.2690033348083	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078827	183057915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
Isoform_91388_4	chr1	-	3454	14	NIC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	34.8671188418453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCGCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	183078520	183057919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074190_183075897_183076015_183076340_183076429_183078446
Isoform_91392_12	chr1	-	6402	29	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	45.1999525916313	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4043	False	NA	-1	True	CATAAA	-18	NA	183150894	183107681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
Isoform_91396_95	chr1	-	3004	23	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	73	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_22	21.1026613025369	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126884	183107681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
Isoform_91399_45	chr1	-	6330	28	FSM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_27	39.9558741524534	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4043	False	NA	-1	True	CATAAA	-18	NA	183150894	183107681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
Isoform_91401_3	chr1	-	3125	22	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	45	0	intron_retention	FALSE	canonical	3	85	junction_21	21.5744242637648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126912	183107681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
Isoform_91402_7	chr1	-	2864	22	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	75	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	35.1730416248418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126882	183107681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
Isoform_91410_1070	chr1	-	1270	8	FSM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	38	609	4	1	multi-exon	FALSE	canonical	3	760	junction_6	70.0437181264644	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGCTATTACGTTTTTC	NA	False	NA	-9	True	AATAAA	-32	NA	184578040	184545873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
Isoform_91411_212	chr1	-	1316	8	FSM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	-8	609	-8	1	multi-exon	FALSE	canonical	3	760	junction_6	70.0437181264644	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGCTATTACGTTTTTC	NA	False	NA	-9	True	AATAAA	-32	NA	184578086	184545873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
Isoform_91417_9	chr1	-	983	2	FSM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	140	1912	140	-1912	multi-exon	FALSE	canonical	3	22	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTATCTCCCCCATCT	NA	False	NA	-1	True	AATACA	-22	NA	184615275	184606034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_184606625_184614882
Isoform_91420_9	chr1	-	3320	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	-384	1285	-384	-1285	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCATGAAGTTTATAGAA	2872	False	NA	NA	False	ATTAAA	-27	NA	184732151	184630270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
Isoform_91421_18	chr1	-	4553	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	-337	5	-337	-5	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGCTGTGAATCACCTG	2919	False	NA	-11	True	AATAAA	-21	NA	184732104	184628990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
Isoform_91425_3	chr1	-	4618	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	-399	2	-399	-2	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGAATCACCTGTTT	7	True	NA	-8	True	AATAAA	-24	NA	184732166	184628987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
Isoform_91429_8	chr1	-	3130	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-358	-1452	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	12.8795323261824	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTAGATCTCCA	2898	False	NA	0	True	AATAAA	-22	NA	184732125	184630437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_184631076_184633005_184633051_184637599_184637855_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
Isoform_91443_713	chr1	-	3478	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	18	1975	18	-1132	multi-exon	FALSE	canonical	3	288	junction_20	32.2887284275964	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCTCTATGATATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	185061575	185018897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
Isoform_91444_219	chr1	-	3540	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	18	1913	18	-1070	multi-exon	TRUE	canonical	3	288	junction_20	32.2887284275964	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTGTGGATGACGAAG	NA	False	NA	1	True	AATAAA	-35	NA	185061575	185018835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
Isoform_91449_24	chr1	-	2575	18	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	16	9843	16	469	5prime_fragment	FALSE	canonical	3	288	junction_15	34.0313309744017	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTTTTTCAACA	NA	False	NA	NA	False	NA	NA	NA	185061577	185026765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
Isoform_9145_30	chr10	-	206	1	Intergenic	novelGene_851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56514084	56513878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_56513900_56514100
Isoform_91452_3	chr1	-	2834	3	FSM	ENSMUSG00000097615.2	ENSMUST00000180623.2	2761	3	-74	1	-74	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTCTCAGTCTTTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	185187839	185179313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_185181412_185186201_185186331_185187232
Isoform_91453_155	chr1	-	1402	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	22	154	0	-154	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTACTGACTTTCAG	NA	False	NA	-16	True	AATAAA	-10	NA	185849485	185820081	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
Isoform_91454_9	chr1	-	1579	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	35	-36	13	36	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGTGTACTATTCATT	NA	False	NA	NA	False	TTTAAA	-34	NA	185849472	185819891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
Isoform_91456_5	chr1	-	1980	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	24	-426	2	426	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAAATTCTCTTTATCC	NA	False	NA	NA	False	NA	NA	NA	185849483	185819501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
Isoform_91458_20	chr1	-	1264	4	FSM	ENSMUSG00000039246.9	ENSMUST00000195481.2	584	4	0	-680	0	-122	multi-exon	FALSE	canonical	3	17	junction_2	56.8174464598878	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTAGTCCCATGATG	NA	False	NA	16	True	AATAAA	-42	NA	185849485	185820049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_185820966_185821640_185821757_185846460_185846561_185849353
Isoform_91461_875	chr1	-	1178	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	33	110	0	4	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGCTTCCCTGCTCA	NA	False	NA	-12	True	ATTAAA	-16	NA	186481522	186453284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
Isoform_91464_23	chr1	-	1311	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	33	-23	0	23	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCTAGAAAACCAGTGAAG	NA	False	NA	-7	True	CATAAA	-29	NA	186481522	186453151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
Isoform_91466_13	chr1	-	3096	4	FSM	ENSMUSG00000001305.6	ENSMUST00000162336.2	3092	4	0	-4	0	4	multi-exon	FALSE	canonical	3	1054	junction_3	20.6774165590278	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGCTTCCCTGCTCA	NA	False	NA	-12	True	ATTAAA	-16	NA	186481522	186453284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_186453744_186468312_186468512_186469784_186472061_186481360
Isoform_91468_38	chr1	-	4336	4	NNC	ENSMUSG00000001305.6	novel	3092	4	NA	NA	0	4	intron_retention	FALSE	non_canonical	2	12	junction_2	493.577417095502	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGCTTCCCTGCTCA	NA	False	NA	-12	True	ATTAAA	-16	NA	186481522	186453284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_186453744_186468312_186470161_186470193_186472061_186481360
Isoform_91483_326	chr1	-	3700	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	2	4	2	-4	multi-exon	FALSE	canonical	3	162	junction_13	20.9446461104513	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCAGTGTGTCTTCAGT	NA	False	NA	-6	True	ATTAAA	-16	NA	188740035	188703295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
Isoform_91485_53	chr1	-	3727	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	-23	2	-22	-2	multi-exon	FALSE	canonical	3	162	junction_13	20.9446461104513	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGTGTCTTCAGTTA	NA	False	NA	-4	True	ATTAAA	-18	NA	188740060	188703293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
Isoform_91493_13	chr1	-	3513	17	NIC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	48.7384601726398	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGTGTCTTCAGTT	NA	False	NA	-5	True	ATTAAA	-17	NA	188740038	188703294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
Isoform_91497_5	chr1	-	2288	2	NNC	ENSMUSG00000037624.16	novel	334	2	NA	NA	4529	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCAGCTCTTTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	188942885	188940132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_188942305_188942769
Isoform_9151_11	chr10	-	235	1	Intergenic	novelGene_852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCTTTTGTGGTAG	NA	False	NA	NA	False	NA	NA	NA	57342705	57342470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_57342500_57342700
Isoform_91515_40	chr1	-	9857	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	6	1267	6	823	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTCTTTGAATGTGTG	NA	False	NA	58	True	AGTAAA	-18	NA	189420277	189374069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
Isoform_91516_30	chr1	-	10131	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	6	993	6	-993	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTAGATGATCTGTTCTT	NA	False	NA	-5	True	AATAAA	-28	NA	189420277	189373795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
Isoform_91518_70	chr1	-	9746	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	6	1378	6	712	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTTTTGTAAAAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	189420277	189374180	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
Isoform_9152_3	chr10	+	3241	1	Antisense	novelGene_ENSMUSG00000019877.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCTTCAACAAATGATGA	NA	False	NA	NA	False	NA	NA	NA	57395214	57398455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_57395200_57398500
Isoform_91520_5	chr1	-	9805	18	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	2	818	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	65.9448233236195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATACATGTCTTTGAAT	NA	False	NA	53	True	AGTAAA	-13	NA	189420281	189374074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412468_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
Isoform_91534_22	chr1	-	1620	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.8538448651751	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGGTTTCTGAATGTC	NA	False	NA	-7	True	AATAAA	-16	NA	189654502	189612689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_189613064_189614305_189614415_189616020_189616195_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_91535_18	chr1	-	1737	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-59	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.8538448651751	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGGTTTCTGAATGTC	NA	False	NA	-7	True	AATAAA	-16	NA	189654619	189612689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_189613064_189614305_189614415_189616020_189616195_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_91536_6	chr1	-	3001	11	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-23	0	intron_retention	FALSE	canonical	3	299	junction_6	22.8613210466937	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654583	189612690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_189613064_189614305_189614415_189616020_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_91537_10	chr1	-	2904	11	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	299	junction_6	22.8613210466937	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGGTTTCTGAATGTC	NA	False	NA	-7	True	AATAAA	-16	NA	189654485	189612689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_189613064_189614305_189614415_189616020_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_91538_14	chr1	-	1154	9	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	-25	4699	-25	-145	5prime_fragment	FALSE	canonical	3	299	junction_4	18.6543393075177	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTCCTGTGTGCT	NA	False	NA	NA	False	AGTAAA	-12	NA	189654585	189617387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_91539_14	chr1	-	1065	9	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	64	4699	-46	-145	5prime_fragment	FALSE	canonical	3	299	junction_4	18.6543393075177	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTCCTGTGTGCT	NA	False	NA	NA	False	AGTAAA	-12	NA	189654496	189617387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_9154_6	chr10	-	172	1	Intergenic	novelGene_853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGATGTGAGTGAGGTC	NA	False	NA	NA	False	NA	NA	NA	57492852	57492680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_57492700_57492900
Isoform_91540_95	chr1	-	3979	15	FSM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	15	1	-8	-1	multi-exon	FALSE	canonical	3	29	junction_3	6.52154983457904	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTCCTCATTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	190643952	190505076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
Isoform_91541_4	chr1	-	4311	15	FSM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	15	-331	-8	331	multi-exon	FALSE	canonical	3	29	junction_3	6.52154983457904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTGTTTGTCACACTT	NA	False	NA	NA	False	NA	NA	NA	190643952	190504744	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
Isoform_91543_15	chr1	-	3889	14	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	11.9782840983518	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTCCTCATTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	190643955	190505076	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
Isoform_91544_6	chr1	-	3196	12	ISM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	-2	25570	-2	-1	5prime_fragment	FALSE	canonical	3	35	junction_4	5.58036700117193	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTCATTGTGTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	190643969	190530645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
Isoform_91545_3	chr1	-	5577	11	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-9	-254	intron_retention	FALSE	canonical	3	35	junction_3	5.54616984954482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAATCGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	190643953	190528519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
Isoform_91546_4	chr1	-	3712	8	FSM	ENSMUSG00000037568.13	ENSMUST00000166139.7	3897	8	70	115	-12	-113	multi-exon	FALSE	canonical	0	0	junction_7	1.82946406783796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAGGACTTCACGATG	NA	False	NA	NA	False	AATAAA	-12	NA	190711423	190679957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190682454_190690810_190690927_190692294_190692677_190698399_190698475_190699125_190699183_190702600_190702690_190710377_190710785_190711333
Isoform_91547_3	chr1	-	3782	8	FSM	ENSMUSG00000037568.13	ENSMUST00000166139.7	3897	8	0	115	0	-113	multi-exon	FALSE	canonical	0	0	junction_7	1.82946406783796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAGGACTTCACGATG	NA	False	NA	NA	False	AATAAA	-12	NA	190711493	190679957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190682454_190690810_190690927_190692294_190692677_190698399_190698475_190699125_190699183_190702600_190702690_190710377_190710785_190711333
Isoform_91548_4	chr1	-	4082	11	NNC	ENSMUSG00000066595.10	novel	4040	10	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	11.1427106217473	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATATGTCCTTTAAA	NA	False	NA	-1	True	AATAAA	-18	NA	190758272	190738045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190752632_190752760_190753272_190753454_190757573
Isoform_91550_51	chr1	-	4067	10	FSM	ENSMUSG00000066595.10	ENSMUST00000085635.6	4040	10	-28	1	-28	-1	multi-exon	FALSE	canonical	2	14	junction_1	7.45521608765167	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATATGTCCTTTAAAA	NA	False	NA	0	True	AATAAA	-19	NA	190758383	190738044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190753272_190753454_190757573
Isoform_91553_12	chr1	-	1191	10	FSM	ENSMUSG00000026632.18	ENSMUST00000027945.6	1196	10	1	4	0	-1	multi-exon	FALSE	canonical	2	15	junction_3	9.99011857466179	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTGTATTTTTAAAAAA	NA	False	NA	-8	True	TATAAA	-12	NA	190795101	190778042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190778518_190781478_190781557_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
Isoform_91554_14	chr1	-	1223	10	FSM	ENSMUSG00000026632.18	ENSMUST00000110893.10	1242	10	14	5	-13	-5	multi-exon	FALSE	canonical	2	9	junction_2	11.4309521329882	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAATGATTTGTCTT	NA	False	NA	7	True	TATAAA	-27	NA	190795115	190778027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
Isoform_91555_224	chr1	-	1894	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	88	2	88	-2	multi-exon	FALSE	canonical	3	64	junction_2	6.37704215656966	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTAGTGTGGCACTGGT	NA	False	NA	-2	True	AATAAA	-21	NA	190915449	190902494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
Isoform_91556_72	chr1	-	1978	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	4	2	4	-2	multi-exon	FALSE	canonical	3	64	junction_2	6.37704215656966	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTAGTGTGGCACTGGT	NA	False	NA	-2	True	AATAAA	-21	NA	190915533	190902494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
Isoform_91558_43	chr1	-	652	4	FSM	ENSMUSG00000037499.10	ENSMUST00000046770.10	742	4	89	1	89	-1	multi-exon	FALSE	canonical	3	115	junction_1	10.5303793326209	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGTGTATGGTTCTT	NA	False	NA	-1	True	AATAAA	-18	NA	191050302	191038986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191039287_191042115_191042220_191043656_191043718_191050115
Isoform_9156_3	chr10	-	3012	1	Intergenic	novelGene_854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTCGTGTGTTTGTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	57983964	57980952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_57981000_57984000
Isoform_91565_281	chr1	-	3075	13	FSM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	13	0	13	0	multi-exon	FALSE	canonical	3	325	junction_3	33.6760506723827	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTTGCTCTTTTGTCT	NA	False	NA	-4	True	AATAAA	-24	NA	191129225	191084171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
Isoform_91566_247	chr1	-	3100	13	FSM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	-13	1	-13	-1	multi-exon	FALSE	canonical	3	325	junction_3	33.6760506723827	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTGCTCTTTTGTC	NA	False	NA	-5	True	AATAAA	-23	NA	191129251	191084172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
Isoform_9157_4	chr10	-	171	1	Intergenic	novelGene_855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATCGTGAGAACT	NA	False	NA	NA	False	NA	NA	NA	57995440	57995269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_57995300_57995400
Isoform_91584_19	chr1	-	4196	15	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	124.936249049388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGGCCTTTGTGGAA	NA	False	NA	-15	True	NA	NA	NA	191307656	191269485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300517_191300606_191300669_191301778_191301878_191302690_191302817_191307460
Isoform_9159_8	chr10	+	200	1	Intergenic	novelGene_856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATGTTAAG	NA	False	NA	NA	False	NA	NA	NA	58154953	58155153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_58155000_58155200
Isoform_91590_629	chr1	-	4060	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	25	127	2	-127	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTAAGATGGCTTGGG	NA	False	NA	-7	True	AATAAA	-23	NA	191307631	191269603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
Isoform_91591_495	chr1	-	4210	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	1	1	1	-1	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTGGAAGAGTGTGT	NA	False	NA	-7	True	NA	NA	NA	191307655	191269477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
Isoform_91594_15	chr1	-	4917	16	Fusion	ENSMUSG00000102246.2_ENSMUSG00000037474.14	novel	4230	16	NA	NA	2	-725	multi-exon	FALSE	non_canonical	0	0	junction_1	126.554265918705	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTGTTCCAAGACTTT	NA	False	NA	NA	False	NA	NA	NA	191307631	191268721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_-_191269239_191269263_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
Isoform_9160_21	chr10	-	175	1	Intergenic	novelGene_857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAAACATTAC	NA	False	NA	NA	False	NA	NA	NA	58210559	58210384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_58210400_58210600
Isoform_91602_14	chr1	-	2255	11	FSM	ENSMUSG00000026637.15	ENSMUST00000195815.3	2214	11	-40	-1	-40	-1	multi-exon	FALSE	canonical	1	2	junction_6	1.02469507659596	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGGGCTCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	191776908	191729166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191729969_191731758_191731928_191733717_191733859_191738764_191738858_191741554_191741630_191742389_191742468_191743409_191743575_191746941_191747044_191751193_191751252_191754716_191754936_191776555
Isoform_91606_10	chr1	-	3807	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	53	-2016	1	0	multi-exon	FALSE	canonical	3	28	junction_1	6.62077871128477	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCTTCTATTTTTAT	NA	False	NA	-1	True	ATTAAA	-13	NA	191822306	191783070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
Isoform_91609_4	chr1	-	3783	11	NIC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	11.1449540151586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCTTCTATTTTTAT	NA	False	NA	-1	True	ATTAAA	-13	NA	191822340	191783070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_191785456_191785925_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
Isoform_9161_9	chr10	-	178	1	Intergenic	novelGene_858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCACTTTGTA	NA	False	NA	NA	False	NA	NA	NA	58233418	58233240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_58233200_58233400
Isoform_91613_5	chr1	-	1633	10	FSM	ENSMUSG00000037395.17	ENSMUST00000192491.6	1623	10	-11	1	-2	-1	multi-exon	FALSE	canonical	2	7	junction_1	11.5373788665845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGGTTTTTTGTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	191822334	191785684	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
Isoform_91616_17	chr1	-	2855	12	FSM	ENSMUSG00000037375.17	ENSMUST00000044190.12	2839	12	-15	-1	-15	1	multi-exon	TRUE	canonical	3	12	junction_1	5.12327374676559	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATGTGTCTTGATACT	NA	False	NA	NA	False	AATAAA	-15	NA	192453546	192195134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
Isoform_91618_17	chr1	-	3320	4	FSM	ENSMUSG00000016262.15	ENSMUST00000155579.8	3350	4	29	1	29	0	multi-exon	FALSE	canonical	2	5	junction_2	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTTTTTTAAAATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	192538035	192526796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_192529524_192532058_192532175_192533259_192533452_192537750
Isoform_91619_3	chr1	-	9230	9	FSM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	41	3	-17	-3	multi-exon	FALSE	canonical	2	2	junction_5	6.65206734782504	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACGTTTCTTCACA	169	False	NA	NA	False	AATAAA	-15	NA	192718042	192573543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
Isoform_9162_11	chr10	-	3899	1	Intergenic	novelGene_859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-17	NA	58240230	58236331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_58236300_58240200
Isoform_91620_6	chr1	-	2624	12	FSM	ENSMUSG00000016181.11	ENSMUST00000195291.6	5504	12	10	2870	10	465	multi-exon	FALSE	canonical	2	5	junction_2	17.8908536584507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTTTATGCGTATT	NA	False	NA	-18	True	NA	NA	NA	192812542	192789595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_192790095_192796064_192796289_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
Isoform_91622_112	chr1	-	2627	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	56	2887	-9	464	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATGCGTAT	NA	False	NA	-19	True	NA	NA	NA	192812524	192789596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
Isoform_91626_3	chr1	-	1298	6	FSM	ENSMUSG00000016194.15	ENSMUST00000016338.15	1623	6	267	58	267	-3	multi-exon	FALSE	canonical	0	0	junction_4	1.01980390271856	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAGTAACTATGAATGG	NA	False	NA	NA	False	AATAAA	-25	NA	192924670	192903999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_192904537_192905929_192906074_192922538_192922725_192922834_192922947_192923639_192923771_192924482
Isoform_91627_54	chr1	-	840	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	32	-1	32	1	multi-exon	FALSE	canonical	3	79	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTATTTAATTCTTGG	NA	False	NA	0	True	AATAAA	-17	NA	192955493	192954467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_192955111_192955296
Isoform_91628_58	chr1	-	764	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	108	-1	108	1	multi-exon	FALSE	canonical	3	79	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTATTTAATTCTTGG	NA	False	NA	0	True	AATAAA	-17	NA	192955417	192954467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_192955111_192955296
Isoform_91629_3	chr1	-	3701	9	NIC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	1	814	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	81.0361609098062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCTTGATTGTGGT	NA	False	NA	NA	False	NA	NA	NA	194813868	194778875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
Isoform_9163_4	chr10	-	4641	1	Intergenic	novelGene_860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-16	NA	58240973	58236332	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_58236300_58241000
Isoform_91630_4	chr1	-	1302	9	NIC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	78.6018447620665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTATCAGGAGTGAGT	NA	False	NA	54	True	NA	NA	NA	194813873	194780965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
Isoform_91632_5	chr1	-	1371	10	NNC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	252	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.0049533617285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813379	194786103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813279
Isoform_91633_37	chr1	-	1631	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	20	0	-7	0	multi-exon	FALSE	canonical	3	104	junction_9	54.0893179933677	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGTGGTTCATACTT	NA	False	NA	-1	True	AATAAA	-19	NA	194813849	194786097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
Isoform_91637_104	chr1	-	1329	10	NIC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_9	50.3432661280975	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813867	194786103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
Isoform_91638_4	chr1	-	473	2	Antisense	novelGene_ENSMUSG00000073633.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATCATTAA	NA	False	NA	NA	False	NA	NA	NA	84827723	84821719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_84822113_84827643
Isoform_91639_34	chr1	-	3056	2	NNC	ENSMUSG00000045005.10	novel	6915	2	NA	NA	1	57	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTATAA	NA	False	NA	-3	True	AATATA	-16	NA	64776907	64773570	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_64776011_64776291
Isoform_91642_5	chr1	-	749	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	6461	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGCCTCCTGCTCTAT	NA	False	NA	NA	False	AATAAA	-26	NA	132206195	132195992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
Isoform_91643_14	chr1	-	593	5	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	6207	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	39.6169155790806	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACCCTTCTTAATTTC	NA	False	NA	-1	True	AATAAA	-17	NA	132206195	132196246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_132196405_132196619_132196718_132202453_132202560_132202761_132202875_132206077
Isoform_91648_10	chr1	-	3466	2	Intergenic	novelGene_656	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACCTTTCAAAATGTAC	6818	False	NA	NA	False	AATAAA	-21	NA	181858844	181853227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_181856457_181858607
Isoform_91653_9	chr1	-	2411	3	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	5.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTCTTTGGATTTT	NA	False	NA	NA	False	CATAAA	-11	NA	11465746	11454293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_11456468_11457012_11457110_11465606
Isoform_91656_18	chr1	-	1351	10	NNC	ENSMUSG00000026260.13	novel	675	6	NA	NA	-10	2603	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	411.765845003093	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTGGTCATAGTGT	NA	False	NA	NA	False	NA	NA	NA	92401499	92377171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_92377484_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
Isoform_91657_13	chr1	-	2273	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	23206	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	47.932823363073	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAAGTTCTGTGACTCT	NA	False	NA	-1	True	NA	NA	NA	132206195	132179247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_132181184_132202453_132202560_132202761_132202875_132206077
Isoform_91659_3	chr1	-	1888	2	Intergenic	novelGene_637	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	180713193	180704944	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_180706628_180712988
Isoform_91660_10	chr1	-	552	2	Intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGATAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	119371867	119367898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_119368350_119371766
Isoform_91662_8	chr1	-	1038	6	NNC	ENSMUSG00000055067.16	novel	6871	12	NA	NA	-14	51846	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	157.634260235521	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATTGGCATAAATTAGC	NA	False	NA	NA	False	AATAAA	-17	NA	179345584	179153253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_179153693_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_91666_3	chr1	-	383	2	NNC	ENSMUSG00000102368.2	novel	553	4	NA	NA	-24	-69493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAGAAAGAATATTAA	NA	False	NA	NA	False	NA	NA	NA	140584166	140567406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_140567689_140584065
Isoform_91669_3	chr1	-	718	2	Intergenic	novelGene_600	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTACTGTGTGTATGT	NA	False	NA	NA	False	ATTAAA	-17	NA	171870298	171865444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_171866052_171870187
Isoform_91670_3	chr1	-	866	3	Intergenic	novelGene_373	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTATTATTGTTACTG	6631	False	NA	NA	False	AATAGA	-24	NA	131821196	131801310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131801968_131802327_131802419_131821078
Isoform_91675_6	chr1	-	2247	2	FSM	ENSMUSG00000025902.14	ENSMUST00000191939.2	840	2	127	-1534	-4	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTTTAGTATGTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	4563831	4561153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_4562892_4563322
Isoform_91677_65	chr1	-	796	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	2	1096	2	134	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGAGTCCCTGGTCTT	1651	False	NA	-7	True	NA	NA	NA	4855931	4844524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
Isoform_91682_1168	chr1	-	1006	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	31	3166	2	0	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGCTCAGGTCTTTTG	1651	False	NA	-10	True	ATTAAA	-22	NA	4855931	4846599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
Isoform_9169_4	chr10	-	177	1	Intergenic	novelGene_861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATTAAGTTACCT	NA	False	NA	NA	False	NA	NA	NA	58393740	58393563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_58393600_58393700
Isoform_91698_8	chr1	-	5178	16	FSM	ENSMUSG00000025912.17	ENSMUST00000088658.11	4980	16	-195	-3	-195	3	multi-exon	FALSE	canonical	1	5	junction_10	11.7158961339806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCTTGGCATTGCTCA	NA	False	NA	-5	True	AATAAA	-15	NA	9770629	9737636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_9740238_9741803_9741984_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
Isoform_91699_21	chr1	-	5005	15	FSM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	-382	-2130	-197	8	multi-exon	FALSE	canonical	1	5	junction_9	10.6999904634709	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCATTGCTCATTTCA	NA	False	NA	0	True	AATAAA	-20	NA	9770631	9737631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
Isoform_917_1144	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_3	4608.45413946538	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
Isoform_91702_19	chr1	-	4048	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-54	5755	-54	-5755	multi-exon	FALSE	canonical	3	96	junction_2	5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAGATTATATCTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	9818661	9794601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_9795576_9807190_9807278_9815674
Isoform_91703_90	chr1	-	5185	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-12	4576	-12	-4576	multi-exon	FALSE	canonical	3	96	junction_2	5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTCTTCCTGTTCA	NA	False	NA	NA	False	AATACA	-15	NA	9818619	9793422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_9795576_9807190_9807278_9815674
Isoform_91706_10	chr1	-	7869	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-36	1916	-36	-1916	multi-exon	FALSE	canonical	3	96	junction_2	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTGCTTGTATCAAT	NA	False	NA	-5	True	NA	NA	NA	9818643	9790762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_9795576_9807190_9807278_9815674
Isoform_91707_5	chr1	-	8020	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-54	1783	-54	-1783	multi-exon	FALSE	canonical	3	96	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGGTTTGTTTGACTG	NA	False	NA	1	True	AATAAA	-22	NA	9818661	9790629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_9795576_9807190_9807278_9815674
Isoform_91708_9	chr1	-	1703	3	ISM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	-1	0	0	0	intron_retention	FALSE	canonical	3	144	junction_1	272	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014343	10012249	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_10012375_10012547_10012617_10012834
Isoform_91709_37	chr1	-	402	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	-1	-1	0	1	multi-exon	FALSE	canonical	3	144	junction_1	223.143202649977	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGTGGGCAGTAATTT	NA	False	NA	-14	True	AATAAA	-13	NA	10014343	10012248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10012375_10012547_10012617_10012834_10012943_10014244
Isoform_9171_27	chr10	+	244	1	Intergenic	novelGene_862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGCCTCTAACTTTAGC	32	False	NA	NA	False	NA	NA	NA	58394420	58394664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_58394400_58394700
Isoform_91710_9	chr1	-	1928	2	ISM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	65	0	1	intron_retention	FALSE	canonical	3	538	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGTGGGCAGTAATTT	NA	False	NA	-14	True	AATAAA	-13	NA	10014343	10012248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_10012381_10012547
Isoform_91712_45	chr1	-	1708	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	-895	3	0	-1	multi-exon	FALSE	canonical	3	538	junction_1	75	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTGTGGGCAGTAAT	NA	False	NA	-16	True	AATAAA	-11	NA	10014343	10012250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10012381_10012547_10012617_10012834
Isoform_91715_23	chr1	-	446	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	-40	67	-40	-1	multi-exon	FALSE	canonical	3	370	junction_3	129.892263049036	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTGTGGGCAGTAAT	NA	False	NA	-16	True	AATAAA	-11	NA	10014383	10012250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
Isoform_91716_132	chr1	-	408	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	65	0	1	multi-exon	FALSE	canonical	3	370	junction_3	129.892263049036	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGTGGGCAGTAATTT	NA	False	NA	-14	True	AATAAA	-13	NA	10014343	10012248	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
Isoform_91717_5	chr1	-	473	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_3	129.892263049036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGGACTTTTTGTCAAT	NA	False	NA	1	True	AATAAA	-15	NA	10014343	10012183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
Isoform_91721_15	chr1	-	4017	3	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	6	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTCTGTTAACTCTG	-29	True	NA	NA	False	AATAAA	-16	NA	10038166	10030388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_10033747_10037323_10037743_10037926
Isoform_91726_71	chr1	-	1298	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	-5	11	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	313.343653036022	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTCCTTCTGTGGTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	10108175	10095056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107886
Isoform_91729_716	chr1	-	1290	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	177	231	-5	11	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTCCTTCTGTGGTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	10108175	10095056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
Isoform_9173_7	chr10	+	176	1	Intergenic	novelGene_863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGATATAAATACTA	2556	False	NA	NA	False	NA	NA	NA	58396944	58397120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_58396900_58397100
Isoform_91730_31	chr1	-	1514	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	-47	231	-6	11	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTCCTTCTGTGGTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	10108399	10095056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
Isoform_91731_32	chr1	-	1522	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	176	0	-6	0	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCTGACTGGCCTGAGT	NA	False	NA	-1	True	AGTAAA	-40	NA	10108176	10094825	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
Isoform_91734_55	chr1	-	1248	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	-8	11	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	318.204272730071	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTCCTTCTGTGGTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	10108382	10095056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10108143
Isoform_9174_7	chr10	-	565	1	NIC	ENSMUSG00000019917.11	novel	1821	10	NA	NA	347	-54896	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	59057322	59056757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_59056800_59057300
Isoform_91745_84	chr1	-	7365	38	FSM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-406	19	-406	-19	multi-exon	TRUE	canonical	3	88	junction_35	18.4564716033902	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAGTGTAACCCACA	NA	False	NA	-35	True	AATAAA	-18	NA	10303301	10207814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
Isoform_9175_27	chr10	+	4570	1	FSM	ENSMUSG00000098188.2	ENSMUST00000182161.2	4482	1	-90	2	-90	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGAGTGTCTGTGGT	NA	False	NA	3	True	AATAAA	-20	NA	59057684	59062254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59057700_59062300
Isoform_91752_4	chr1	-	4068	21	ISM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-411	35062	-411	442	5prime_fragment	FALSE	canonical	3	88	junction_18	20.6434008826065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTATGTAAAGGATACAC	NA	False	NA	NA	False	ATTAAA	-22	NA	10303306	10242857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
Isoform_91753_16	chr1	-	3829	20	FSM	ENSMUSG00000067851.12	ENSMUST00000131556.2	3424	20	-406	1	-406	-1	multi-exon	FALSE	canonical	3	88	junction_17	20.9399616632847	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATAATGTAATGTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	10303301	10243300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
Isoform_91758_3	chr1	-	3742	4	ISM	ENSMUSG00000025938.17	ENSMUST00000188454.7	8463	10	-90	70640	-90	38630	5prime_fragment	FALSE	canonical	2	5	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAAAGTAAACA	NA	False	NA	NA	False	NA	NA	NA	13062964	13007412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_13009425_13014203_13014337_13059803_13061188_13062751
Isoform_91773_15	chr1	-	4683	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-834	-32	-834	32	intron_retention	FALSE	canonical	3	343	junction_5	37.0135110466435	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	-26	True	AATAAA	-42	NA	13198221	13183648	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
Isoform_91776_11	chr1	-	2623	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	1041	28	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	145.124436401374	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGGTTCCTCTTTTC	NA	False	NA	-30	True	AATAAA	-38	NA	13196346	13183652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196261
Isoform_9178_79	chr10	+	181	1	Intergenic	novelGene_864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTAAAGCAAGCTT	NA	False	NA	NA	False	NA	NA	NA	59102776	59102957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_59102800_59103000
Isoform_91781_253	chr1	-	2669	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-75	-30	-75	30	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13197462	13183650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_91786_136	chr1	-	3426	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-833	-29	-833	29	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13198220	13183651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_91789_16	chr1	-	2914	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-75	-275	-75	275	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCGTAATTGGATGGC	NA	False	NA	-6	True	AATAAA	-15	NA	13197462	13183405	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_9179_16	chr10	-	157	1	Intergenic	novelGene_865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	59117213	59117056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_59117100_59117200
Isoform_91797_24	chr1	-	3556	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-962	-30	-962	30	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13198349	13183650	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_918_964	SIRV5	+	519	2	ISM	SIRV5A	SIRV503	526	3	0	149	0	2	5prime_fragment	FALSE	canonical	3	11825	junction_1	0	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCGCCAAAAAATGGGAG	NA	False	NA	NA	False	NA	NA	NA	8201	10993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_SIRV5_+_8586_10858
Isoform_9180_541	chr10	+	1132	1	FSM	ENSMUSG00000069622.6	ENSMUST00000092511.6	630	1	-121	-381	-121	381	mono-exon	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGACTTTATTGATACAA	1381	False	NA	NA	False	NA	NA	NA	59231455	59232587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_59231500_59232600
Isoform_91805_13	chr1	-	8191	23	FSM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	55	-3349	1	-21	multi-exon	FALSE	canonical	3	44	junction_3	7.80826538127789	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGCTTTAGAGATTTTA	NA	False	NA	-20	True	AATAAA	-21	NA	13444252	13209349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
Isoform_91811_600	chr1	-	2810	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	46	82	11	-82	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTTTCCTGAACAAT	9702	False	NA	-7	True	AATAAA	-16	NA	13660088	13635003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
Isoform_91813_192	chr1	-	2888	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	47	3	12	-3	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGAGTCTATTTTTTG	9703	False	NA	-12	True	ATTAAA	-12	NA	13660087	13634924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
Isoform_91838_608	chr1	-	2936	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	27	1531	27	-1531	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAAAAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	13730743	13695084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
Isoform_91841_988	chr1	-	1040	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	26	3428	26	3237	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACCCTTGATACTTGT	NA	False	NA	-11	True	ATTAAA	-14	NA	13730744	13696981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
Isoform_9186_9	chr10	+	2634	1	Intergenic	novelGene_866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59428592	59431226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_59428600_59431200
Isoform_91861_34	chr1	-	3387	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	26	-1532	intron_retention	FALSE	canonical	3	2151	junction_4	166.606842596575	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	13730744	13695085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
Isoform_9187_112	chr5	+	157	1	Intergenic	novelGene_9041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	137280376	137280533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_+_137280400_137280500
Isoform_91872_5	chr1	-	3973	17	FSM	ENSMUSG00000025932.15	ENSMUST00000190337.7	2199	17	-86	-1688	-28	-1	multi-exon	FALSE	canonical	3	31	junction_13	8.4483726243579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCCTTGGATGTCAGT	NA	False	NA	-12	True	AATAAA	-20	NA	14374880	14239178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648
Isoform_91873_5	chr1	-	3900	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-51	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_17	11.4532297011906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGATGTCAGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	14374903	14239176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14374796
Isoform_91874_13	chr1	-	4055	18	FSM	ENSMUSG00000025932.15	ENSMUST00000027066.13	4347	18	288	4	-76	0	multi-exon	FALSE	canonical	3	31	junction_13	8.24998689314257	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGCTCCTTGGATGTC	NA	False	NA	-15	True	AATAAA	-17	NA	14380136	14239181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
Isoform_91876_3	chr1	-	3772	17	NIC	ENSMUSG00000025932.15	novel	3426	17	NA	NA	-51	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	14.9603643003772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGATGTCAGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	14374903	14239176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14374648_14374699_14374796
Isoform_91877_4	chr1	-	3901	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-51	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_17	12.8453672663576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCCTTGGATGTCAGT	NA	False	NA	-12	True	AATAAA	-20	NA	14374903	14239178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14374796
Isoform_91878_11	chr1	-	4038	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-53	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	10.2268389688172	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCCTTGGATGTCAGT	NA	False	NA	-12	True	AATAAA	-20	NA	14380113	14239178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
Isoform_9188_125	chr10	+	187	1	Intergenic	novelGene_867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATCTTAAAAAAAAAGAA	7849	False	NA	NA	False	NA	NA	NA	59548702	59548889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_59548700_59548900
Isoform_91880_8	chr1	-	1802	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	-67	6	-65	-6	multi-exon	FALSE	canonical	3	23	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAACATGCATTGTAAAA	NA	False	NA	-2	True	AATAAA	-15	NA	14826281	14823575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_14824550_14825453
Isoform_91881_29	chr1	-	1739	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	-1	3	1	-3	multi-exon	FALSE	canonical	3	23	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCATTGTAAAAGTT	NA	False	NA	1	True	AATAAA	-18	NA	14826215	14823572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_14824550_14825453
Isoform_91885_13	chr11	+	219	1	FSM	ENSMUSG00000080776.2	ENSMUST00000119853.2	813	1	658	-64	658	64	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATATTTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	46619302	46619521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr11_+_46619300_46619500
Isoform_9189_4	chr10	-	157	1	Intergenic	novelGene_868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	59762021	59761864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_59761900_59762000
Isoform_91891_261	chr1	-	861	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2535.91209210589	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAATTGAAATGTGTCG	NA	False	NA	-18	True	AATAAA	-12	NA	16174627	16171531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173884_16174593
Isoform_91894_14169	chr1	-	891	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	259	13	-1	-2	multi-exon	FALSE	canonical	3	5309	junction_1	773.772953348289	14169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAATTGAAATGTGTCG	NA	False	NA	-18	True	AATAAA	-12	NA	16174627	16171531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
Isoform_9190_19	chr10	+	174	1	Intergenic	novelGene_869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	59772662	59772836	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_59772700_59772800
Isoform_91908_3	chr1	-	2774	13	FSM	ENSMUSG00000025920.20	ENSMUST00000027052.13	2763	13	-5	-6	-4	0	multi-exon	TRUE	canonical	0	0	junction_2	35.7596140918774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGTTCCTTCAGTCC	NA	False	NA	NA	False	AGTAAA	-19	NA	16589535	16299027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16300091_16301226_16301316_16415927_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
Isoform_91912_22	chr1	-	3159	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	-61	809	-1	-4	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTTTGATTCATATA	NA	False	NA	NA	False	AATAAA	-14	NA	16589532	16414518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
Isoform_91913_8	chr1	-	3252	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	-56	711	3	1	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTGCTCATTTATAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	16589527	16414420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
Isoform_91915_50	chr1	-	2989	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-33	8	-3	0	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAGACTTTGATTCA	NA	False	NA	NA	False	AATAAA	-10	NA	16589497	16414522	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
Isoform_91918_15	chr1	-	3083	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-26	-93	4	0	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACTGCTCATTTATAAA	NA	False	NA	NA	False	AATAAA	-16	NA	16589490	16414421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
Isoform_91919_11	chr1	-	3149	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-91	-94	-24	1	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTGCTCATTTATAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	16589555	16414420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
Isoform_9192_7	chr10	-	177	1	Intergenic	novelGene_870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59783062	59782885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_59782900_59783100
Isoform_91920_23	chr1	-	3033	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-76	7	-9	1	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGACTTTGATTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	16589540	16414521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
Isoform_91921_12	chr1	-	1564	7	NIC	ENSMUSG00000025939.20	novel	1508	7	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	195.295289241702	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGTCTGTTCTTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	16689512	16611012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_16612014_16614172_16614257_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_91922_59	chr1	-	1518	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-4	-358	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689487	16640363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
Isoform_91924_6	chr1	-	3001	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	0	1104	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATATGCTGTGTTCATC	NA	False	NA	NA	False	AAGAAA	-7	NA	16689508	16638901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
Isoform_91929_203	chr1	-	1601	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	222	358	-8	-358	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689491	16640363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_91932_26	chr1	-	2091	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	212	-122	7	122	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGGTATGTAAACCCATA	NA	False	NA	NA	False	AATAAA	-21	NA	16689501	16639883	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_91935_16	chr1	-	2336	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	201	-356	-4	356	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTGTGGACACTGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	16689512	16639649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_91938_7	chr1	-	3066	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	222	-1107	-8	1107	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGCTGTGTTCATCCCT	NA	False	NA	NA	False	AAGAAA	-10	NA	16689491	16638898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_91939_8	chr1	-	1507	5	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	8	-358	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	178.300834266136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689500	16640363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_16641507_16652150_16652227_16655499_16655656_16672485_16672578_16689460
Isoform_91945_61	chr1	-	973	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	1	1040	1	2	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTTGTTTATTGC	NA	False	NA	0	True	TATAAA	-22	NA	16727107	16712988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
Isoform_91946_294	chr1	-	489	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	1	1524	1	-58	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATACCTGTAGTTCAGT	NA	False	NA	-6	True	AATAAA	-35	NA	16727107	16713472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
Isoform_91948_35	chr1	-	2006	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	1	7	1	-7	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTACGATCAGCACTTG	NA	False	NA	-7	True	AATAAA	-16	NA	16727107	16711955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
Isoform_91950_49	chr1	-	562	4	FSM	ENSMUSG00000079658.10	ENSMUST00000186948.7	641	4	-24	103	0	-54	multi-exon	FALSE	canonical	3	147	junction_3	1146.38165062465	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTAGTTCAGTTAGT	NA	False	NA	-2	True	AATAAA	-39	NA	16727266	16713468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727135
Isoform_91954_69	chr1	-	1994	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	1	-1035	1	-7	multi-exon	TRUE	canonical	3	1066	junction_3	717.825574603995	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTACGATCAGCACTTG	NA	False	NA	-7	True	AATAAA	-16	NA	16727265	16711955	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
Isoform_91955_452	chr1	-	482	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	478	0	-54	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTAGTTCAGTTAGT	NA	False	NA	-2	True	AATAAA	-39	NA	16727266	16713468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
Isoform_91956_109	chr1	-	962	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	-2	0	2	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTTGTTTATTGC	NA	False	NA	0	True	TATAAA	-22	NA	16727266	16712988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
Isoform_91958_21	chr1	-	525	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	-43	478	-43	-54	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTAGTTCAGTTAGT	NA	False	NA	-2	True	AATAAA	-39	NA	16727309	16713468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
Isoform_91965_3	chr1	-	4769	6	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.29285308902091	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGTGTCTTTCCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	17168124	17065161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_17066741_17066791_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
Isoform_91966_3	chr1	-	2756	2	ISM	ENSMUSG00000042686.6	ENSMUST00000038382.5	4809	5	-2	95030	-2	-95030	5prime_fragment	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGC	NA	False	NA	NA	False	NA	NA	NA	17168115	17160191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_17162282_17167449
Isoform_91994_1919	chr1	-	2979	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	52	0	0	0	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	1919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGTGTATGTGTG	NA	False	NA	-12	True	AATACA	-9	NA	20890484	20873191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
Isoform_91995_4719	chr1	-	2935	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	52	44	0	-6	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	4719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACTTCATGCTTTGTG	NA	False	NA	-18	True	AGTAAA	-18	NA	20890484	20873235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
Isoform_91996_1290	chr1	-	2965	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	22	44	22	-6	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACTTCATGCTTTGTG	NA	False	NA	-18	True	AGTAAA	-18	NA	20890514	20873235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
Isoform_91997_532	chr1	-	3010	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	21	0	21	0	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGTGTATGTGTG	NA	False	NA	-12	True	AATACA	-9	NA	20890515	20873191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
Isoform_91998_92	chr1	-	3368	18	NNC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	0	410	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	627.217477997769	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAAGTCCCTTTGTCCT	NA	False	NA	0	True	AATAAA	-22	NA	20890484	20872781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_20873025_20873045_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
Isoform_92_9	ERCC-00077	+	255	1	FSM	ERCC-00077A	DQ516742	258	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	C	NA	False	NA	NA	False	AATAAA	-32	NA	2	257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00077_+_0_300
Isoform_9201_3	chr10	-	161	1	Intergenic	novelGene_871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTTTAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	59829149	59828988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_59829000_59829100
Isoform_92012_83	chr1	-	1416	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	4	5072	4	2942	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGAGCCGCCAGAT	NA	False	NA	-2	True	AATAAA	-21	NA	21149449	21071594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
Isoform_92013_19	chr1	-	6518	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-19	-7	-19	7	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGGCTTCACTGGTGTG	NA	False	NA	2	True	AATAAA	-31	NA	21149472	21066515	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
Isoform_92018_4	chr1	-	1782	8	NNC	ENSMUSG00000026158.12	novel	4844	7	NA	NA	-86	178	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.1829759651415	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGTGTTTTCAAATTCT	NA	False	NA	NA	False	AATAAA	-12	NA	23422342	23408626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_23408781_23408809_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417889_23418052_23418140_23421895
Isoform_9202_443	chr19	+	176	1	Intergenic	novelGene_5596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	443	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4975023	4975199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_+_4975000_4975200
Isoform_92020_4	chr1	-	2289	7	NNC	ENSMUSG00000026158.12	novel	4844	7	NA	NA	-91	651	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	17.2046505340853	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGGATTTTTTTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	23422347	23408153	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417889_23418052_23418140_23421895
Isoform_92022_13	chr1	-	2233	8	NNC	ENSMUSG00000026158.12	novel	4844	7	NA	NA	-61	655	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.8949253276197	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTTTTTTGTGTGTAT	NA	False	NA	NA	False	AATAAA	-23	NA	23422317	23408149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_23408781_23408807_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
Isoform_92023_7	chr1	-	4882	8	NNC	ENSMUSG00000026158.12	novel	4844	7	NA	NA	-79	-14	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.8949253276197	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGCATTGTACCACGC	NA	False	NA	NA	False	AATAAA	-29	NA	23422335	23405518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_23408781_23408807_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
Isoform_92028_453	chr1	-	2350	10	FSM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	-63	2	-63	-2	multi-exon	FALSE	canonical	3	380	junction_6	35.0269737329517	453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTTATTTGTGGGTT	NA	False	NA	-4	True	ATTAAA	-15	NA	23961461	23884707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
Isoform_9204_35	chr10	-	179	1	Intergenic	novelGene_873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	8877	False	NA	NA	False	NA	NA	NA	59849912	59849733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_59849700_59849900
Isoform_92040_217	chr1	-	651	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	26	6	0	-6	multi-exon	FALSE	canonical	3	315	junction_1	0.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGATTTATTATTTTA	NA	False	NA	-7	True	AATAAA	-17	NA	24044711	24035025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24035442_24042237_24042388_24044626
Isoform_92041_6	chr1	-	1488	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	26	-831	0	831	multi-exon	FALSE	canonical	3	315	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTGGCTTCTAGTAC	NA	False	NA	NA	False	NA	NA	NA	24044711	24034188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24035442_24042237_24042388_24044626
Isoform_92042_3	chr1	-	7401	4	NNC	ENSMUSG00000026154.5	novel	683	3	NA	NA	-3	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	148.963828569966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGATTTATTATTTTA	NA	False	NA	-7	True	AATAAA	-17	NA	24044714	24035025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_24040598_24040619_24040684_24040710_24042388_24044626
Isoform_92045_4	chr1	-	6123	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-32	6	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	12.0657683733739	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATGCTTGCTTACTCC	NA	False	NA	1	True	AATAAA	-37	NA	24139329	24050167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
Isoform_92047_8	chr1	-	5512	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-24	-9	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	12.0657683733739	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAACATTATTTCTC	NA	False	NA	-12	True	ATTAAA	-16	NA	24139321	24050770	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
Isoform_9205_7	chr10	+	177	1	Intergenic	novelGene_874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	2233	False	NA	NA	False	NA	NA	NA	59919069	59919246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_59919100_59919200
Isoform_92051_4	chr1	-	5329	20	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	15.966724400723	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTCTCATGTTGACT	NA	False	NA	-3	True	ATTAAA	-25	NA	24139337	24050761	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24139141
Isoform_92052_3	chr1	-	5365	21	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	13.6318560731839	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATTTCTCATGTTGAC	NA	False	NA	-4	True	ATTAAA	-24	NA	24139321	24050762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
Isoform_9206_16	chr10	-	178	1	Intergenic	novelGene_875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAGAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	60058421	60058243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_60058200_60058400
Isoform_9207_27	chr10	+	178	1	Intergenic	novelGene_876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAGAAAATAAT	9059	False	NA	NA	False	NA	NA	NA	60071556	60071734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_60071600_60071700
Isoform_92072_8	chr1	-	7004	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	18	441	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	40.3277682111084	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30912957	30842185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902245_30912658
Isoform_92073_3	chr1	-	6586	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	40.3277682111084	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTCCTTAATTGGTA	NA	False	NA	-12	True	AATAAA	-16	NA	30912980	30842626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902245_30912658
Isoform_92077_50	chr1	-	7097	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-295	765	18	442	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGTGTGTGATTTGA	NA	False	NA	-2	True	GATAAA	-15	NA	30912957	30842184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
Isoform_9208_11	chr10	+	177	1	Intergenic	novelGene_877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAGGAGTAAA	2933	False	NA	NA	False	NA	NA	NA	60081810	60081987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_60081800_60082000
Isoform_92080_7	chr1	-	7907	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-339	-1	1	1	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTATTTTTGGCAGTT	NA	False	NA	0	True	AATAAA	-20	NA	30913001	30841418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
Isoform_92081_6	chr1	-	6408	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_14	39.454766143377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTATTCCTTAATTGGT	NA	False	NA	-13	True	AATAAA	-15	NA	30912980	30842627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30912658
Isoform_92085_9	chr1	-	6688	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	442	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	43.1286777009994	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGTGTGTGATTTGA	NA	False	NA	-2	True	GATAAA	-15	NA	30912979	30842184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30912658
Isoform_92086_3	chr1	-	4939	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	44.488533262367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTCCTTAATTGGTA	NA	False	NA	-12	True	AATAAA	-16	NA	30912958	30842626	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30876185_30876348_30902067_30902337_30912658
Isoform_92088_8	chr1	-	5219	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	18	443	combination_of_known_junctions	FALSE	canonical	1	7	junction_12	45.2966553097303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30912957	30842183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30902067_30902337_30912658
Isoform_92092_3	chr1	-	2761	4	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	26	2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	50.7564993101595	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATGGCTATTTTTCTT	NA	False	NA	-10	True	AATAAA	-15	NA	30912949	30868509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_30870641_30876185_30876348_30902067_30902245_30912658
Isoform_92093_60	chr1	-	2861	4	ISM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-295	27090	18	2	5prime_fragment	FALSE	canonical	3	122	junction_2	3.09120616516523	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATGGCTATTTTTCTT	NA	False	NA	-10	True	AATAAA	-15	NA	30912957	30868509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_30870641_30876185_30876348_30902067_30902337_30912658
Isoform_92099_10	chr1	-	2593	3	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	17	2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	52	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATGGCTATTTTTCTT	NA	False	NA	-10	True	AATAAA	-15	NA	30912958	30868509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_30870641_30876185_30876348_30912658
Isoform_92100_4	chr1	-	2685	3	FSM	ENSMUSG00000048874.16	ENSMUST00000188780.2	941	3	32	-1776	32	2	multi-exon	FALSE	canonical	3	35	junction_1	46.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATGGCTATTTTTCTT	NA	False	NA	-10	True	AATAAA	-15	NA	30912943	30868509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_30870641_30902067_30902337_30912658
Isoform_92109_679	chr1	-	2848	6	FSM	ENSMUSG00000117310.3	ENSMUST00000076587.6	2851	6	1	2	-1	-2	multi-exon	FALSE	canonical	3	443	junction_5	787.975024984929	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTCCTTTTCCTAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	30988837	30980662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985718_30988629
Isoform_9211_16	chr10	+	171	1	Intergenic	novelGene_719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTTAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	7493204	7493375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_7493200_7493400
Isoform_92116_2317	chr1	-	2851	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-1	1279	-1	-2	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	2317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTCCTTTTCCTAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	30988837	30980662	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
Isoform_92123_144	chr1	-	4130	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTTTCTGCATTTG	NA	False	NA	-1	True	ATTAAA	-18	NA	30988837	30979383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
Isoform_92132_63	chr1	-	1157	8	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	255	2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	107.409572788139	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCAAGTGGGAGTCTT	8832	False	NA	0	True	AATAAA	-20	NA	33660968	33492888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33660914
Isoform_92133_30	chr1	-	1159	8	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	255	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_7	111.583043112312	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	8832	False	NA	-2	True	AATAAA	-18	NA	33660968	33492890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33660910
Isoform_92135_93	chr1	-	1379	10	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-14686	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_9	88.3062851670253	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	2980	False	NA	-2	True	AATAAA	-18	NA	33677091	33492890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33677047
Isoform_92136_15	chr1	-	1618	10	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-14680	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	101.707763399863	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	2986	False	NA	-2	True	AATAAA	-18	NA	33677085	33492890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33676802
Isoform_92137_11	chr1	-	1392	10	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-13265	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	102.591723488764	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGTGCAAGTGGGAGT	4401	False	NA	-3	True	AATAAA	-17	NA	33675670	33492891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33675612
Isoform_92140_469	chr1	-	1953	14	FSM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	22	0	22	0	multi-exon	FALSE	canonical	3	132	junction_10	82.0868352460372	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	NA	False	NA	-2	True	AATAAA	-18	NA	33708854	33492890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
Isoform_92143_80	chr1	-	1742	4	NNC	ENSMUSG00000042215.9	novel	1860	3	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.2968437932844	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTAGCATTGGCCATTA	NA	False	NA	-6	True	NA	NA	NA	33796804	33784565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33785226_33785270_33786098_33787297_33787408_33796659
Isoform_92145_3	chr1	-	1863	4	NNC	ENSMUSG00000042215.9	novel	1860	3	NA	NA	-41	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.2968437932844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCCATTATTTTTCTA	NA	False	NA	2	True	NA	NA	NA	33796917	33784557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33785226_33785270_33786098_33787297_33787408_33796659
Isoform_92146_6	chr1	-	1674	2	FSM	ENSMUSG00000042215.9	ENSMUST00000187602.2	378	2	18	-1314	4	-4	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTCTAGCATTGGCCA	NA	False	NA	-9	True	NA	NA	NA	33796804	33784568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_33786098_33796659
Isoform_92147_11	chr1	-	3834	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	18	-205	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	97.3165738995961	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTCCAGAAATTCTC	NA	False	NA	-12	True	AATAAA	-16	NA	33853633	33800830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_92148_11	chr1	-	3934	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-27	-6	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	97.3165738995961	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAACTAAGAGGAAATTT	NA	False	NA	-8	True	AATAAA	-11	NA	33853534	33800631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_92150_9	chr1	-	4045	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	97.3165738995961	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAGAGGAAATTTTTTC	NA	False	NA	-4	True	AATAAA	-15	NA	33853641	33800627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_92155_7	chr1	-	4269	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	72	-383	-29	383	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCATGCCTGTGATTC	NA	False	NA	NA	False	ATTAAA	-13	NA	33853536	33800242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_92157_200	chr1	-	3992	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-34	0	9	0	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853642	33800625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_92167_85	chr1	-	3313	13	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-5	8095	-5	7903	5prime_fragment	FALSE	canonical	3	234	junction_5	31.6503247306494	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGCTGTCTGTTTC	NA	False	NA	-4	True	AATAAA	-13	NA	33853613	33808720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_92169_17	chr1	-	3713	13	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-19	7709	-19	-7709	5prime_fragment	FALSE	canonical	3	234	junction_5	31.6503247306494	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTTCTAAGATTGCAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	33853627	33808334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_9217_4	chr10	+	171	1	Intergenic	novelGene_878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAAGGAGACAG	NA	False	NA	NA	False	NA	NA	NA	60149191	60149362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_60149200_60149400
Isoform_92173_10	chr1	-	6336	4	FSM	ENSMUSG00000042197.14	ENSMUST00000044455.8	11876	4	-4	5544	-4	-5544	multi-exon	FALSE	canonical	3	15	junction_1	149.247743329301	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTGTACTCCTGTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	33853655	33836760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_33842695_33844419_33844501_33852807_33852892_33853418
Isoform_92174_33	chr1	-	2454	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	26	7	1	-7	multi-exon	FALSE	canonical	3	24	junction_2	6.36832439151427	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAATGCACTTTCTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	33946871	33891139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
Isoform_92175_11	chr1	-	2495	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	-15	7	-15	-7	multi-exon	FALSE	canonical	3	24	junction_2	6.36832439151427	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAATGCACTTTCTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	33946912	33891139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
Isoform_92177_4	chr1	-	1409	4	NIC	ENSMUSG00000042182.17	novel	382	3	NA	NA	4	670	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	17.4610678049451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTGTTCATGTGTAAG	NA	False	NA	NA	False	AAAACA	-33	NA	33946845	33912168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_33912993_33917340_33917519_33922521_33922730_33946646
Isoform_92178_5	chr1	-	1066	3	ISM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	62	25717	14	-4011	5prime_fragment	FALSE	canonical	3	39	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAACCAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	33946835	33916849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_33917519_33922521_33922730_33946646
Isoform_92179_3	chr1	-	1131	3	ISM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	1	25713	1	-4007	5prime_fragment	FALSE	canonical	3	39	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAACAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	33946896	33916845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_33917519_33922521_33922730_33946646
Isoform_9218_5	chr10	+	181	1	Intergenic	novelGene_879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	60176095	60176276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_60176100_60176300
Isoform_92180_333	chr1	-	1379	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	319	7	319	1	multi-exon	FALSE	canonical	3	256	junction_1	5.33853912601566	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCACAGAGCTCTCATT	7523	False	NA	-6	True	AATAAA	-16	NA	34478434	34475757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
Isoform_92185_28	chr1	-	4935	7	FSM	ENSMUSG00000037503.13	ENSMUST00000185469.7	778	7	-31	-4126	-3	0	multi-exon	TRUE	canonical	3	22	junction_4	165.108802511152	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882097	34852306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859045_34867847_34867929_34875813_34875895_34881908
Isoform_92189_409	chr1	-	4976	7	FSM	ENSMUSG00000037503.13	ENSMUST00000047534.12	5030	7	53	1	1	-1	multi-exon	FALSE	canonical	3	412	junction_3	28.4702573847789	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTGACCTTTTCGTGG	NA	False	NA	-8	True	AATAAA	-17	NA	34882093	34852307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
Isoform_9219_20	chr10	-	179	1	Intergenic	novelGene_880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	60362932	60362753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_60362800_60362900
Isoform_92197_71	chr1	-	4998	7	FSM	ENSMUSG00000037503.13	ENSMUST00000170092.8	941	7	-48	-4009	1	0	multi-exon	FALSE	canonical	3	35	junction_3	164.703521516694	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882093	34852306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859091_34867847_34867929_34875813_34875895_34881908
Isoform_9220_6	chr10	-	301	1	Intergenic	novelGene_881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAAAGGCATGGGT	NA	False	NA	NA	False	NA	NA	NA	60423269	60422968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_60423000_60423300
Isoform_92201_6	chr1	-	1996	3	NNC	ENSMUSG00000103708.2	novel	654	3	NA	NA	5415	1278	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTAGGTGTCTCACTTG	NA	False	NA	NA	False	NA	NA	NA	36044656	36040787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_36042488_36042894_36043073_36044538
Isoform_92219_246	chr1	-	5576	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	-2	3459	-2	0	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283388	36182566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
Isoform_92220_7	chr1	-	6883	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	-9	2159	-9	1296	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCAAGTAATATCTCCC	NA	False	NA	-9	True	AATAAA	-15	NA	36283395	36181266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
Isoform_92232_243	chr1	-	5543	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTGCTTTTTCTTCT	NA	False	NA	-4	True	NA	NA	NA	36283378	36182565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
Isoform_9224_5	chr10	-	2130	1	ISM	ENSMUSG00000020099.9	ENSMUST00000077925.7	5869	17	66854	5	55914	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTCCTGGTCTGATGT	NA	False	NA	NA	False	AATAAA	-33	NA	60600506	60598376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_60598400_60600500
Isoform_92244_3	chr1	-	4758	22	FSM	ENSMUSG00000010453.13	ENSMUST00000188961.7	2907	22	-8	-1843	2	0	multi-exon	TRUE	canonical	1	3	junction_8	60.2515512921168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408260	36374810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36386297_36386376_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
Isoform_92245_6	chr1	-	4712	22	NIC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	57.8086216294237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTTGCTTCAGCTTG	NA	False	NA	-12	True	AATAAA	-16	NA	36408238	36374815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36386297_36386376_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
Isoform_92249_12	chr1	-	4557	21	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	13	0	combination_of_known_junctions	TRUE	canonical	3	11	junction_19	43.3662022778108	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408223	36374810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404667_36406849_36407116_36408185
Isoform_92250_4	chr1	-	4591	20	NIC	ENSMUSG00000010453.13	novel	4527	21	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_19	45.2450392132353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGCTTCAGCTTGTTTT	NA	False	NA	-8	True	AATAAA	-20	NA	36407122	36374811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404714_36406830
Isoform_92255_50	chr1	-	4680	21	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_19	36.1657296345587	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408260	36374810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
Isoform_92256_65	chr1	-	4593	20	ISM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	1140	0	0	0	3prime_fragment	FALSE	canonical	3	87	junction_19	29.8025822004935	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36407122	36374810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849
Isoform_92257_3	chr1	-	5649	20	ISM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	82	2	3	-2	3prime_fragment	FALSE	canonical	3	87	junction_19	29.8025822004935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGCTTCAGCTTGTTT	NA	False	NA	-9	True	AATAAA	-19	NA	36408180	36374812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849
Isoform_92258_48	chr1	-	4635	21	FSM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	28	0	2	0	multi-exon	FALSE	canonical	3	87	junction_19	30.7481300244421	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408234	36374810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
Isoform_92260_7	chr1	-	6741	20	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	6	-6	intron_retention	FALSE	canonical	3	128	junction_15	24.0073857518289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCGTTGCTTCAGCTT	NA	False	NA	-13	True	AATAAA	-15	NA	36408230	36374816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36407116_36408185
Isoform_92262_28	chr1	-	1091	8	NIC	ENSMUSG00000001143.14	novel	705	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	59.6068753738756	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGAGTTTCTACTCCCT	NA	False	NA	0	True	AATAAA	-17	NA	36484338	36458950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36459117_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_92265_324	chr1	-	2246	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	1118	0	3	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCAGTGGCCTTC	NA	False	NA	0	True	CATAAA	-24	NA	36484338	36462263	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_92267_14	chr1	-	3367	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	-3	0	3	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTGTCAGAAGTGATC	NA	False	NA	NA	False	AATAGA	-16	NA	36484338	36461142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_92270_5	chr1	-	6516	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	26	-3164	12	970	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	36484326	36457981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_92272_10	chr1	-	2207	8	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	65.1654096299939	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGAGTTCTGGCTCAGT	NA	False	NA	-7	True	CATAAA	-17	NA	36484335	36462270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482600_36482691_36484130
Isoform_92274_5	chr1	-	2131	7	NIC	ENSMUSG00000001143.14	novel	2174	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	83.372157622714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTGGCTCAGTGGCC	NA	False	NA	-3	True	CATAAA	-21	NA	36484338	36462266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482600_36482691_36484130
Isoform_92276_14	chr1	-	2578	7	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	153	junction_5	19.8997487421324	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCTGGCTCAGTGGCCT	NA	False	NA	-2	True	CATAAA	-22	NA	36484338	36462265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_92280_3	chr1	-	3024	12	Fusion	ENSMUSG00000079610.10_ENSMUSG00000067653.13	novel	2277	9	NA	NA	16	-8	multi-exon	FALSE	canonical	0	0	junction_8	22.3828446703539	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCAGCCTGGTTGCCT	7042	False	NA	NA	False	ATTAAA	-11	NA	36586284	36569276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371_36573519_36578437_36578616_36580939_36581144_36581842_36581947_36585990
Isoform_92281_4	chr1	+	2911	2	Antisense	novelGene_ENSMUSG00000109510.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36572912	36575998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_36573197_36573371
Isoform_92282_11	chr1	-	2682	4	NIC	ENSMUSG00000079610.10	novel	2646	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	27.1947707391615	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7026	False	NA	NA	False	NA	NA	NA	36586300	36576586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36578616_36580904_36581144_36581842_36581947_36585990
Isoform_92285_3	chr1	-	2468	5	Fusion	ENSMUSG00000079610.10_ENSMUSG00000109510.2	novel	664	4	NA	NA	16	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	27.0601182554696	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7042	False	NA	NA	False	NA	NA	NA	36586284	36576588	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_-_36578071_36578090_36578616_36580904_36581144_36581842_36581947_36586166
Isoform_92286_21	chr1	-	2629	4	FSM	ENSMUSG00000079610.10	ENSMUST00000207843.2	2646	4	18	-1	18	1	multi-exon	FALSE	canonical	3	9	junction_3	29.9369708257569	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7044	False	NA	NA	False	NA	NA	NA	36586282	36576586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36585990
Isoform_92289_13	chr1	-	2477	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	220	-588	6	1	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7020	False	NA	NA	False	NA	NA	NA	36586306	36576586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
Isoform_9229_38	chr10	-	180	1	Intergenic	novelGene_882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGAACTTTGTAA	5619	False	NA	NA	False	NA	NA	NA	60710680	60710500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_60710500_60710700
Isoform_92290_46	chr1	-	817	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	244	1048	18	218	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCACATGGGCAAAGATA	7044	False	NA	-11	True	AATAAA	-16	NA	36586282	36578222	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
Isoform_92293_3	chr1	-	3657	15	NNC	ENSMUSG00000026121.14	novel	3773	15	NA	NA	788	-24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	3.99042220670383	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAATTTAACCCTGCC	NA	False	NA	NA	False	AATAAA	-8	NA	36595819	36587746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_36589450_36589586_36589658_36589748_36589910_36590806_36590920_36591007_36591231_36591332_36591478_36591799_36591976_36592059_36592212_36592304_36592422_36592551_36592649_36592796_36592896_36593006_36593070_36593332_36593482_36595012_36595159_36595577
Isoform_92295_140	chr1	-	2243	15	FSM	ENSMUSG00000046337.18	ENSMUST00000170295.8	2286	15	37	6	37	-2	multi-exon	FALSE	canonical	3	61	junction_5	44.2795502622663	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGTTCTGGAGTTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	36722227	36601778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_92297_10	chr1	-	2166	14	NIC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	36	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	52.7337849106805	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGTTCTGGAGTTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	36722228	36601778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36602102_36603410_36603564_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_92298_4	chr1	-	2088	14	NIC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	53.5654220357669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGTTCTGGAGTTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	36722225	36601778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36602102_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_92299_47	chr1	-	1618	10	FSM	ENSMUSG00000046337.18	ENSMUST00000114981.3	1659	10	37	4	37	-4	multi-exon	FALSE	canonical	3	94	junction_7	27.7328525599353	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-23	NA	36722227	36639060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_92300_23	chr1	-	1676	10	FSM	ENSMUSG00000046337.18	ENSMUST00000114981.3	1659	10	44	-61	44	61	multi-exon	FALSE	canonical	3	94	junction_7	27.7328525599353	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATTAGCTTCTGCCGGC	NA	False	NA	NA	False	AGTAAA	-12	NA	36722220	36638995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_9231_10	chr10	-	187	1	Intergenic	novelGene_883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTGAAAGAATTAACAGT	NA	False	NA	NA	False	NA	NA	NA	60918233	60918046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_60918000_60918200
Isoform_92310_1488	chr1	-	2127	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	35	1086	-26	-1086	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGTGGCTCTGATT	NA	False	NA	-17	True	TATAAA	-28	NA	36749054	36738280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_92311_375	chr1	-	3213	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	35	0	-26	0	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749054	36737194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_92312_26	chr1	-	2172	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	-11	1087	-11	-1087	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGTGTGTGGCTCTGAT	NA	False	NA	-18	True	TATAAA	-27	NA	36749100	36738281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_92314_21	chr1	-	3361	10	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-17	0	intron_retention	FALSE	canonical	3	484	junction_1	32.9256551253289	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749045	36737194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_92315_46	chr1	-	2281	10	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-26	-1089	intron_retention	FALSE	canonical	3	484	junction_1	32.9256551253289	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCGGTGTGTGGCTCTG	NA	False	NA	-20	True	TATAAA	-25	NA	36749054	36738283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_92319_32	chr1	-	2455	9	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-26	-1086	intron_retention	FALSE	canonical	3	484	junction_1	34.797404716444	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGTGGCTCTGATT	NA	False	NA	-17	True	TATAAA	-28	NA	36749054	36738280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_92343_312	chr1	-	6630	41	FSM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	-93	9	-93	-6	multi-exon	TRUE	canonical	3	231	junction_29	35.4925256216009	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTTGAATTGTTTTGT	7128	False	NA	-7	True	AATAAA	-16	NA	36978701	36831280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
Isoform_92353_27	chr1	-	3264	26	NIC	ENSMUSG00000026116.12	novel	591	6	NA	NA	-96	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	61.8143543200121	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATTTTCTTTTCATTA	7125	False	NA	NA	False	AATAAA	-20	NA	36978704	36853224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_36853499_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
Isoform_92355_43	chr1	-	3809	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	46	8	46	-8	multi-exon	FALSE	canonical	3	395	junction_2	27.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATCTTTGTTCTGTTT	6318	False	NA	-11	True	NA	NA	NA	37469138	37456172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_37459709_37467422_37467507_37468949
Isoform_92356_864	chr1	-	3779	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	77	7	-26	-7	multi-exon	FALSE	canonical	3	395	junction_2	27.5	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATCTTTGTTCTGTTTC	6349	False	NA	-10	True	NA	NA	NA	37469107	37456171	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_37459709_37467422_37467507_37468949
Isoform_92362_7	chr1	-	7245	16	FSM	ENSMUSG00000026110.16	ENSMUST00000151952.8	7251	16	0	6	0	-6	multi-exon	FALSE	canonical	2	9	junction_15	49.471158825679	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAATGAGTGGATAGAAT	NA	False	NA	36	True	AATAAA	-10	NA	37580097	37478426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119_37575486_37580045
Isoform_92363_6	chr1	-	4354	10	FSM	ENSMUSG00000026090.17	ENSMUST00000162875.8	4634	10	278	2	-12	-2	multi-exon	FALSE	canonical	1	1	junction_1	2.83278861866266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGCTCTGTGCGTCA	NA	False	NA	-3	True	AATAAA	-13	NA	37758888	37650759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_37651478_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37758650
Isoform_92364_3	chr1	-	4471	10	FSM	ENSMUSG00000026090.17	ENSMUST00000162875.8	4634	10	163	0	-127	0	multi-exon	FALSE	canonical	1	1	junction_1	2.83278861866266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTCTGTGCGTCAAT	NA	False	NA	-1	True	AATAAA	-15	NA	37759003	37650757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_37651478_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37758650
Isoform_92365_8	chr1	-	4376	10	NIC	ENSMUSG00000026090.17	novel	4634	10	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	2.62466929133727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTCTGTGCGTCAAT	NA	False	NA	-1	True	AATAAA	-15	NA	37758905	37650757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_37651481_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37758650
Isoform_92366_3	chr1	-	2250	15	ISM	ENSMUSG00000060771.16	ENSMUST00000041815.15	3400	20	3	46680	3	7	5prime_fragment	FALSE	canonical	0	0	junction_5	10.8178329717223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATTAGCATGTTTCC	NA	False	NA	NA	False	AATAAA	-28	NA	37904157	37840536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_37840987_37843709_37843821_37846017_37846187_37850052_37850109_37854612_37854768_37858605_37858722_37873266_37873419_37874338_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
Isoform_92368_4	chr1	-	3685	8	FSM	ENSMUSG00000060771.16	ENSMUST00000123082.9	3953	8	-27	295	-27	-295	multi-exon	FALSE	canonical	2	7	junction_7	8.03309481114831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTTGTGTGGACATA	NA	False	NA	-2	True	NA	NA	NA	37903944	37871778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37903806
Isoform_92369_26	chr1	-	3608	8	FSM	ENSMUSG00000060771.16	ENSMUST00000155852.7	2861	8	-9	-738	-3	-294	multi-exon	FALSE	canonical	2	9	junction_4	6.49960752347276	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTTGTGTGGACATAT	NA	False	NA	-1	True	NA	NA	NA	37904163	37871777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
Isoform_92370_3	chr1	-	3674	8	FSM	ENSMUSG00000060771.16	ENSMUST00000155852.7	2861	8	-75	-738	-69	-294	multi-exon	FALSE	canonical	2	9	junction_4	6.49960752347276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTTGTGTGGACATAT	NA	False	NA	-1	True	NA	NA	NA	37904229	37871777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
Isoform_92371_175	chr1	-	1203	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	27	1	23	-1	multi-exon	FALSE	canonical	3	173	junction_5	18.2543754267908	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGATCCACTCACCT	NA	False	NA	-1	True	AATAAA	-18	NA	37929465	37917969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
Isoform_92372_4	chr1	-	2630	5	NIC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	23	0	intron_retention	FALSE	canonical	3	173	junction_3	16.5906600230371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	0	True	AATAAA	-19	NA	37929465	37917968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_37918445_37918640_37918702_37920013_37921780_37924295_37924398_37929240
Isoform_92378_325	chr1	-	1061	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	111	2209	20	-2	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTCACATGTCTGTTT	NA	False	NA	-7	True	NA	NA	NA	38036285	38026478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_92379_155	chr1	-	1094	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	78	2209	6	-2	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTCACATGTCTGTTT	NA	False	NA	-7	True	NA	NA	NA	38036318	38026478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_92380_33	chr1	-	1348	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	111	1922	20	283	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGGAACTCCATTGG	NA	False	NA	-9	True	ATTAAA	-16	NA	38036285	38026191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_92392_73	chr1	-	1039	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	656	4	6	-2	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTCACATGTCTGTTT	NA	False	NA	-7	True	NA	NA	NA	38036318	38026478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
Isoform_92393_12	chr1	-	1294	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	689	-284	20	284	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGGAACTCCATTGGC	NA	False	NA	-8	True	ATTAAA	-17	NA	38036285	38026190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
Isoform_92396_21	chr1	-	2587	4	FSM	ENSMUSG00000058407.13	ENSMUST00000194747.2	2605	4	20	-2	20	0	multi-exon	FALSE	canonical	3	675	junction_1	99.432836069826	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATGTCTGTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	38036285	38026474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_38026861_38029283_38029539_38033072_38034923_38036189
Isoform_92399_42	chr1	-	1756	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	111	3937	20	1132	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTGGCACCATAGATC	NA	False	NA	NA	False	ATTAAA	-13	NA	38036285	38028206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_92403_16	chr1	-	2542	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	110	3152	19	-698	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTATTGATTAATG	NA	False	NA	NA	False	ATTAAA	-19	NA	38036286	38027421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_92404_16	chr1	-	3094	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	111	2599	20	-145	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTAGTGGAAATTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	38036285	38026868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_9241_60	chr10	+	171	1	Intergenic	novelGene_884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAAAAGAATGT	NA	False	NA	NA	False	NA	NA	NA	60969022	60969193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_60969000_60969200
Isoform_92415_3	chr1	-	4559	25	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_14	64.9444073163091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTACAGGTTTTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	38168727	38091875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38113979_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92419_21	chr1	-	4248	23	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	11	0	combination_of_known_splicesites	TRUE	canonical	3	48	junction_15	37.6965099114511	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168732	38091866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_9242_4	chr10	+	209	1	Intergenic	novelGene_885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTAACTGCTGTGGGACT	NA	False	NA	NA	False	GATAAA	-11	NA	60979786	60979995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_60979800_60980000
Isoform_92421_6	chr1	-	4471	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	52.7071303326381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168756	38091870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92423_3	chr1	-	4314	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_23	56.5329754717544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38168733	38091868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
Isoform_92424_23	chr1	-	4389	23	FSM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	-127	0	12	0	multi-exon	FALSE	canonical	3	101	junction_15	29.8629099122934	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168870	38091866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92425_41	chr1	-	4250	23	FSM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	3	9	3	1	multi-exon	FALSE	canonical	3	101	junction_15	29.8629099122934	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTACAGGTTTTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	38168740	38091875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92426_56	chr1	-	4228	23	FSM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	34	0	34	0	multi-exon	TRUE	canonical	3	101	junction_15	29.8629099122934	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168709	38091866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92427_3	chr1	-	4093	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_22	47.2909055957498	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGGTTTTTTTTTTCTT	NA	False	NA	-3	True	AATAAA	-19	NA	38168870	38091869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
Isoform_92428_6	chr1	-	5033	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	6	0	intron_retention	FALSE	canonical	3	30	junction_14	57.1871203128697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168737	38091866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92429_4	chr1	-	4832	23	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	3	-4	intron_retention	FALSE	canonical	3	30	junction_14	48.2591360767682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168740	38091870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92430_4	chr1	-	5024	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	11	3	intron_retention	FALSE	canonical	2	12	junction_15	59.8130673396263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTACAGGTTTTTTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	38168732	38091873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92431_16	chr1	-	4832	23	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	10	0	intron_retention	FALSE	canonical	3	30	junction_14	42.6752100606313	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168733	38091866	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92432_3	chr1	-	4141	22	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	2	24	junction_13	44.0561381723092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTTTTTTTTCTTGT	NA	False	NA	-1	True	AATAAA	-21	NA	38168752	38091867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92433_4	chr1	-	4135	22	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	49.6560962134204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168740	38091870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92434_6	chr1	-	1824	6	ISM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	2	34777	2	4588	5prime_fragment	FALSE	canonical	3	163	junction_5	15.5769059828966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGTAATCTTAGATTAT	NA	False	NA	NA	False	ATTAAA	-33	NA	38168741	38126643	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_92436_5	chr1	-	5978	23	NNC	ENSMUSG00000037138.19	novel	6010	23	NA	NA	-257	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2.15322168769582	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTGCAGCACTGCGA	NA	False	NA	-1	True	AATATA	-14	NA	38666539	38216407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_38218652_38220340_38220565_38220695_38220746_38224405_38224500_38226016_38226089_38230251_38230389_38232646_38232711_38242891_38243020_38243970_38244173_38246986_38247112_38248633_38249729_38257343_38257537_38291721_38291763_38308790_38308843_38359192_38359245_38368952_38368990_38380801_38380883_38445576_38445625_38573986_38574373_38574491_38574805_38575906_38576028_38666169_38666326_38666476
Isoform_92439_3	chr1	-	3115	7	NNC	ENSMUSG00000026080.15	novel	2975	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	1	junction_6	5.07991688470939	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAAAAGTGTATCTGGG	NA	False	NA	NA	False	ATTAAA	-17	NA	38937248	38902956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936978
Isoform_9244_78	chr10	+	216	1	Intergenic	novelGene_886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATCACAAAACAGGAAG	NA	False	NA	NA	False	NA	NA	NA	61129297	61129513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61129300_61129500
Isoform_92440_107	chr1	-	4068	20	FSM	ENSMUSG00000003134.11	ENSMUST00000054462.11	4451	20	13	370	13	5	multi-exon	FALSE	canonical	3	38	junction_12	7.9882184715386	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTAAAATGTCATTTT	NA	False	NA	-1	True	AATAAA	-20	NA	39517823	39410942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
Isoform_92442_5	chr1	-	4430	20	FSM	ENSMUSG00000003134.11	ENSMUST00000054462.11	4451	20	13	8	13	-8	multi-exon	TRUE	canonical	3	38	junction_12	7.9882184715386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAATGTTTCACGTAT	NA	False	NA	NA	False	AATAAA	-12	NA	39517823	39410580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
Isoform_92443_3	chr1	-	3825	20	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	-37585	5	intron_retention	FALSE	canonical	0	0	junction_19	14.3177243274515	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTAAAATGTCATTTT	9450	False	NA	-1	True	AATAAA	-20	NA	39469297	39410942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39469237
Isoform_92444_6	chr1	-	3567	19	FSM	ENSMUSG00000003134.11	ENSMUST00000193823.2	3512	19	-55	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	8.13011472441188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGAACAGTGTGG	NA	False	NA	NA	False	CATAAA	-19	NA	39517836	39412396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
Isoform_92445_4	chr1	-	2374	9	ISM	ENSMUSG00000003134.11	ENSMUST00000193823.2	3512	19	-44	15351	11	2531	5prime_fragment	FALSE	canonical	3	38	junction_1	6.14283118765281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39517825	39427747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
Isoform_92447_266	chr1	-	2474	7	FSM	ENSMUSG00000048234.14	ENSMUST00000062525.11	2492	7	13	5	13	-5	multi-exon	FALSE	canonical	3	163	junction_3	11.4661337085446	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCTATGTAACA	4730	False	NA	-8	True	AATAAA	-12	NA	39616473	39590381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
Isoform_92454_24	chr1	-	2376	6	NIC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	13	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	66.5924920693016	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAATTTTTCTATGTAAC	4730	False	NA	-9	True	AATAAA	-11	NA	39616473	39590382	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_39591597_39594558_39594752_39599773_39599857_39603128_39603198_39604162_39604414_39615907
Isoform_9246_103	chr10	+	176	1	Intergenic	novelGene_887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTGCAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	61154746	61154922	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61154700_61154900
Isoform_92461_5	chr1	-	3977	6	FSM	ENSMUSG00000041945.13	ENSMUST00000039672.6	3160	6	-20	-797	4	797	multi-exon	FALSE	canonical	3	9	junction_2	1.46969384566991	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGCTATTTTTATCAA	NA	False	NA	NA	False	TTTAAA	-5	NA	40829843	40810400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829644
Isoform_92464_6	chr1	-	2823	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	245	2317	-21	-2317	multi-exon	FALSE	canonical	3	38	junction_11	7.4512187699077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGACTGCTGATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	43131644	43088696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
Isoform_92466_8	chr1	-	3620	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	273	1492	7	-1492	multi-exon	FALSE	canonical	3	38	junction_11	7.4512187699077	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTGGGAAATTCAAAGG	NA	False	NA	NA	False	NA	NA	NA	43131616	43087871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
Isoform_92467_3	chr1	-	5092	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	251	42	-15	-42	multi-exon	FALSE	canonical	3	38	junction_11	7.4512187699077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGGTCATTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-23	NA	43131638	43086421	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
Isoform_92468_11	chr1	-	5591	13	FSM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	-53	69	-38	-49	multi-exon	FALSE	canonical	3	11	junction_11	15.5393765068687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTTCTTGGGTCATT	7730	False	NA	-8	True	ATTAAA	-16	NA	43137835	43086428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
Isoform_92469_13	chr1	-	2597	11	ISM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	245	4265	-21	3223	5prime_fragment	FALSE	canonical	3	38	junction_10	7.81280999384984	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGCCAGTTTTTATTT	NA	False	NA	NA	False	TTTAAA	-14	NA	43131644	43090644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
Isoform_92470_7	chr1	-	3097	12	ISM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	-53	4285	-38	3223	5prime_fragment	FALSE	canonical	3	11	junction_10	16.1260530439677	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGCCAGTTTTTATTT	7730	False	NA	NA	False	TTTAAA	-14	NA	43137835	43090644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
Isoform_92471_7	chr1	-	1258	2	FSM	ENSMUSG00000070939.10	ENSMUST00000187525.2	1795	2	-21	558	-21	-317	multi-exon	FALSE	canonical	3	38	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAGGGCTCATTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	43131644	43113958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_43115113_43131540
Isoform_92472_6	chr1	-	1777	3	ISM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	-72	27599	-57	-317	5prime_fragment	FALSE	canonical	3	11	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAGGGCTCATTCTTGGT	7711	False	NA	NA	False	NA	NA	NA	43137854	43113958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_43115113_43136011_43136210_43137429
Isoform_92473_3	chr1	-	1539	6	FSM	ENSMUSG00000008136.15	ENSMUST00000008280.14	1563	6	25	-1	25	1	multi-exon	FALSE	canonical	1	1	junction_1	0.4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTGTGGACTAATGATT	NA	False	NA	-1	True	AATAAA	-31	NA	43203096	43162232	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_43162826_43167403_43167591_43170811_43170982_43180857_43181033_43192235_43192415_43202861
Isoform_92476_187	chr1	-	2023	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	27	2570	1	-24	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCAGACATGGGTTTTG	NA	False	NA	-26	True	AATAAA	-10	NA	43866933	43788695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
Isoform_92479_5	chr1	-	2221	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	71	2328	12	218	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGGATTGATTTTGT	NA	False	NA	NA	False	NA	NA	NA	43866889	43788453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
Isoform_92480_6	chr1	-	2077	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	-24	2567	-24	-21	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGACATGGGTTTTGAGC	NA	False	NA	-23	True	AATAAA	-13	NA	43866984	43788692	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
Isoform_92482_17	chr1	-	2039	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	5	-19	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	52.099394802392	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATGGGTTTTGAGCTA	NA	False	NA	-21	True	AATAAA	-15	NA	43866929	43788690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
Isoform_92486_3	chr1	-	895	6	NIC	ENSMUSG00000026049.12	novel	935	7	NA	NA	-3	15	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	156.042814637522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATAAAGTATACCTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	44141586	44126004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139096_44141487
Isoform_92487_4	chr1	-	1616	6	FSM	ENSMUSG00000026049.12	ENSMUST00000147571.8	1360	6	-60	-196	1	-1	multi-exon	FALSE	canonical	3	149	junction_5	107.444125013888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTTTGTTTTACTC	NA	False	NA	-1	True	ATTAAA	-19	NA	44141582	44125773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059
Isoform_92488_85	chr1	-	1257	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTTTGTTTTACTC	NA	False	NA	-1	True	ATTAAA	-19	NA	44141593	44125773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
Isoform_9249_7	chr10	+	188	1	Intergenic	novelGene_888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAATTTTGCT	NA	False	NA	NA	False	NA	NA	NA	61162031	61162219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61162000_61162200
Isoform_92491_126	chr1	-	1197	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	9	-246	1	1	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	-2	True	ATTAAA	-18	NA	44141592	44125774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
Isoform_92495_216	chr1	-	2006	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	13	340	13	-1	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCTGTTTTGTTACAGT	NA	False	NA	-6	True	AATAAA	-16	NA	44157955	44146045	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
Isoform_92497_5	chr1	-	2358	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	1	0	1	0	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGGCCTCTGCCTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	44157967	44145705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
Isoform_92500_18	chr1	-	1932	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	-26	453	-26	-112	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTACGTGTGCCCATTC	NA	False	NA	6	True	TATAAA	-34	NA	44157994	44146158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
Isoform_92502_16	chr1	-	2125	9	FSM	ENSMUSG00000026047.14	ENSMUST00000141125.8	2085	9	-42	2	13	0	multi-exon	FALSE	canonical	3	275	junction_5	36.3145976158349	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157955	44146046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
Isoform_9251_70	chr10	+	182	1	Intergenic	novelGene_889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61194996	61195178	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61195000_61195200
Isoform_9252_48	chr10	+	178	1	Intergenic	novelGene_890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	61232849	61233027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61232800_61233000
Isoform_92520_563	chr1	-	4977	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	521	0	521	0	multi-exon	FALSE	canonical	3	237	junction_4	21.0736509753792	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	449	False	NA	NA	False	AATAAA	-16	NA	46892685	46846703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
Isoform_92523_74	chr1	-	5002	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	496	0	496	0	multi-exon	FALSE	canonical	3	237	junction_4	21.0736509753792	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	424	False	NA	NA	False	AATAAA	-16	NA	46892710	46846703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
Isoform_92524_11	chr1	-	5070	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	428	0	428	0	multi-exon	FALSE	canonical	3	237	junction_4	21.0736509753792	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	356	False	NA	NA	False	AATAAA	-16	NA	46892778	46846703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
Isoform_92526_15	chr1	-	5809	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	517	-828	517	828	multi-exon	TRUE	canonical	3	237	junction_4	21.0736509753792	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCCAACTGTTCATCA	445	False	NA	NA	False	AATAAA	-20	NA	46892689	46845875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
Isoform_9253_32	chr10	-	176	1	Intergenic	novelGene_891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	61239669	61239493	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_61239500_61239700
Isoform_92530_25	chr1	-	5102	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	530	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	105.535823301853	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	458	False	NA	NA	False	AATAAA	-16	NA	46892676	46846703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46880907_46881042_46892630
Isoform_92532_70	chr1	-	2837	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	0	1	0	-1	multi-exon	FALSE	canonical	3	37	junction_5	8.25590697622012	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATAGGAGTAACAGAAC	NA	False	NA	-2	True	AATAAA	-31	NA	51517558	51508647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
Isoform_92533_3	chr1	-	2083	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	-53	808	-27	-439	multi-exon	FALSE	canonical	3	37	junction_5	8.25590697622012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCTAATCTGATTATTT	NA	False	NA	NA	False	NA	NA	NA	51517611	51509454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
Isoform_92538_3	chr1	-	2359	6	FSM	ENSMUSG00000026107.12	ENSMUST00000185534.2	708	6	0	-1651	0	-3	multi-exon	FALSE	canonical	1	1	junction_5	22.105203007437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGATATAGGAGTAACAGA	NA	False	NA	-4	True	AATAAA	-29	NA	51517558	51508649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51517459
Isoform_92539_6	chr1	-	2334	6	FSM	ENSMUSG00000026107.12	ENSMUST00000188204.7	972	6	-44	-1318	-18	-1	multi-exon	FALSE	canonical	2	4	junction_5	20.9227149289952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATAGGAGTAACAGAAC	NA	False	NA	-2	True	AATAAA	-31	NA	51517602	51508647	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51517530
Isoform_9255_6	chr10	+	262	1	Intergenic	novelGene_892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTCTCAATAACCCCTA	NA	False	NA	NA	False	NA	NA	NA	61253257	61253519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61253300_61253500
Isoform_92550_73	chr1	-	4791	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-20	-4	-7	-1	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCTGGATTACAACTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51955107	51789148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_92552_127	chr1	-	3757	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-20	1030	-7	-1030	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAATTATCAGAATAGT	NA	False	NA	-14	True	ATTAAA	-17	NA	51955107	51790182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_92553_103	chr1	-	4982	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	8	-223	1	-6	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTCTCCGAAGTCTT	NA	False	NA	10	True	AAAAAG	-21	NA	51955079	51788929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_92559_7	chr1	-	5096	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-106	-223	37	-6	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTCTCCGAAGTCTT	NA	False	NA	10	True	AAAAAG	-21	NA	51955193	51788929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_92563_16	chr1	-	4951	30	FSM	ENSMUSG00000018417.15	ENSMUST00000046390.14	5052	30	101	0	-29	0	multi-exon	FALSE	canonical	3	36	junction_8	59.0883173807801	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	16	True	GATAAA	-5	NA	51955129	51788923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_92567_7	chr1	-	2480	16	ISM	ENSMUSG00000018417.15	ENSMUST00000114537.9	4618	29	-23	28866	-23	867	5prime_fragment	FALSE	canonical	3	256	junction_6	28.2437013627227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTTTC	NA	False	NA	NA	False	NA	NA	NA	51955123	51818006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_92569_8	chr1	-	4957	18	FSM	ENSMUSG00000026103.15	ENSMUST00000114513.9	4966	18	1	8	1	-8	multi-exon	FALSE	canonical	3	13	junction_3	80.7225587298202	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACTATGAGAAAAAG	NA	False	NA	NA	False	AATAAA	-13	NA	52272381	52202614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_52205474_52207494_52207559_52207643_52207721_52208055_52208118_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
Isoform_92574_3	chr1	-	4441	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	72.2236034055965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272381	52224441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
Isoform_92575_5	chr1	-	4574	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	72.0864912603063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52272375	52224439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
Isoform_92579_110	chr1	-	4403	15	FSM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	16	1177	7	-1	multi-exon	FALSE	canonical	3	106	junction_8	52.7471829211992	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52272375	52224439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
Isoform_92583_6	chr1	-	4468	15	FSM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	-49	1177	-49	-1	multi-exon	FALSE	canonical	3	106	junction_8	52.7471829211992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52272440	52224439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
Isoform_92586_14	chr1	-	4461	15	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	64.5226190366366	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGTTTTTTTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	52272375	52224440	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
Isoform_92588_6	chr1	-	3637	8	NIC	ENSMUSG00000002881.15	novel	3640	9	NA	NA	-132	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	9.71008312455224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGCTTAGAGTGCTT	NA	False	NA	-2	True	AATAAA	-19	NA	52539606	52496454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_52498466_52501246_52501364_52503943_52504104_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
Isoform_92590_26	chr1	-	3635	8	FSM	ENSMUSG00000002881.15	ENSMUST00000069792.14	3874	8	236	3	-128	-3	multi-exon	FALSE	canonical	3	26	junction_5	3.6922422809486	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCTTAGAGTGCT	NA	False	NA	-3	True	AATAAA	-18	NA	52539602	52496455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_52498466_52501246_52501364_52503943_52504107_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
Isoform_92595_8	chr1	-	1829	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	-56	3994	-56	247	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTACAGTTCAAGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	52856903	52828579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
Isoform_92597_48	chr1	-	3642	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	220	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCAGTCCTCATTT	679	False	NA	-5	True	AATAAA	-14	NA	52992004	52961482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_52964894_52991773
Isoform_92611_78	chr1	-	3609	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	32	0	32	0	multi-exon	FALSE	canonical	3	220	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCAGTCCTCATTT	712	False	NA	-5	True	AATAAA	-14	NA	52991971	52961482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_52964894_52991773
Isoform_92612_41	chr1	-	3966	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	-326	1	180	-1	multi-exon	FALSE	canonical	3	220	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTCTCAGTCCTCATT	354	False	NA	-6	True	AATAAA	-13	NA	52992329	52961483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_52964894_52991773
Isoform_92621_13	chr1	-	3504	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	-284	0	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCAGTCCTCATTT	NA	False	NA	-5	True	AATAAA	-14	NA	52992793	52961482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_52964894_52992700
Isoform_92623_6	chr1	-	538	8	NIC	ENSMUSG00000060715.10	novel	646	9	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	3	26	junction_7	12.1504178142657	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACTAGAACAGAATGGAA	NA	False	NA	NA	False	AATAAA	-22	NA	53226769	53197741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_53197948_53202384_53202405_53209396_53209420_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53226712
Isoform_92626_18	chr1	-	3156	13	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	39.2778563569857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTTGTTTTCACGTC	6099	False	NA	NA	False	AATAAA	-13	NA	53336130	53228350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53335890
Isoform_92628_177	chr1	-	3045	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	5	4	2	-4	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTTTTCACGTCC	6057	False	NA	NA	False	AATAAA	-14	NA	53336172	53228349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
Isoform_92629_5	chr1	-	3596	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	4	-546	1	546	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGTTGTTCCTTTTGCTC	6056	False	NA	NA	False	TATAAA	-41	NA	53336173	53227799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
Isoform_92638_1085	chr1	-	2367	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	50	25	50	3	multi-exon	FALSE	canonical	3	502	junction_1	45.94344349306	1085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGTGTAGTAGTTTCA	NA	False	NA	-27	True	AATAAA	-16	NA	53391861	53383800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
Isoform_92648_54	chr1	-	2688	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	5	600	5	-600	multi-exon	FALSE	canonical	3	57	junction_1	6.25316246521123	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGATATTCTTTCCTT	691	False	NA	-5	True	GATAAA	-22	NA	53824378	53795264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
Isoform_92649_18	chr1	-	3278	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	7	8	7	-8	multi-exon	TRUE	canonical	3	57	junction_1	6.25316246521123	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGAAGCTGCCTTAAGT	693	False	NA	NA	False	AATAAA	-18	NA	53824376	53794672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
Isoform_92653_26	chr1	-	4617	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	-36	1	-36	-1	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCACCTTTTAAACTT	6664	False	NA	-7	True	AATAAA	-18	NA	54478166	54435163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
Isoform_92654_182	chr1	-	2997	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	10	1575	10	-1575	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACAATATTGCCTTCT	6710	False	NA	-5	True	AATAAA	-18	NA	54478120	54436737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
Isoform_92655_74	chr1	-	4570	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	12	0	12	0	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCACCTTTTAAACTTT	6712	False	NA	-6	True	AATAAA	-19	NA	54478118	54435162	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
Isoform_92659_21	chr1	-	4485	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	27	6071	27	-6071	multi-exon	FALSE	canonical	3	24	junction_18	5.36548800562088	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTTCATTGG	NA	False	NA	NA	False	AATAAA	-25	NA	54596814	54518223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
Isoform_92662_8	chr1	-	10603	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	-33	13	-31	-13	multi-exon	TRUE	canonical	3	24	junction_18	5.36548800562088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGGTACAAAGATTGTT	NA	False	NA	-10	True	AATAAA	-16	NA	54596874	54512165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
Isoform_92663_3	chr1	-	6291	28	FSM	ENSMUSG00000052331.15	ENSMUST00000179030.8	6140	28	-158	7	-158	-5	multi-exon	FALSE	canonical	1	2	junction_15	2.70395737013985	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAATGTGTGTTTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	54965704	54684505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_54687495_54690827_54690920_54692901_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
Isoform_92720_2067	chr1	-	4251	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	88	1856	1	-1852	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTGTGTTTTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	55066552	55026183	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
Isoform_92721_118	chr1	-	6104	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	88	3	1	1	multi-exon	TRUE	canonical	2	1032	junction_2	157.733865172392	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATAGTATACCAGTT	NA	False	NA	-12	True	AATAAA	-14	NA	55066552	55024330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
Isoform_92722_345	chr1	-	4331	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	4	1860	4	-1856	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGTGTGTGTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	55066636	55026187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
Isoform_92733_93	chr1	-	6065	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	-1851	intron_retention	FALSE	canonical	2	1032	junction_2	150.157661314426	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTGTGTTTTTTGAA	NA	False	NA	-1	True	AATAAA	-21	NA	55066552	55026182	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
Isoform_92787_8177	chr1	-	2235	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	188	0	188	0	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	8177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4643	False	NA	-6	True	AATAAA	-16	NA	55126995	55116993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
Isoform_92798_160	chr1	-	2400	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4268	False	NA	-6	True	AATAAA	-16	NA	55127370	55116993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
Isoform_92802_171	chr1	-	2249	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4419	False	NA	-6	True	AATAAA	-16	NA	55127219	55116993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
Isoform_92828_4	chr1	-	2066	4	FSM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	-6	-8	-6	8	multi-exon	FALSE	canonical	3	14	junction_1	26.1576417557513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTCTGTTATGTGTAAC	NA	False	NA	NA	False	AATAAA	-27	NA	57416709	57398372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57399823_57401724_57401923_57414406_57414679_57416563
Isoform_92829_6	chr1	-	599	3	ISM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	-21	3376	-21	-3376	5prime_fragment	FALSE	canonical	3	59	junction_2	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGCTTTTGAAGAC	NA	False	NA	NA	False	NA	NA	NA	57416724	57401756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_57401923_57414406_57414679_57416563
Isoform_92830_10	chr1	-	936	3	ISM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	49	2969	49	-2969	5prime_fragment	FALSE	canonical	3	59	junction_2	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTATGGCTACACAATGC	NA	False	NA	NA	False	NA	NA	NA	57416654	57401349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_57401923_57414406_57414679_57416563
Isoform_92832_3	chr1	-	1292	9	NIC	ENSMUSG00000048495.17	novel	766	9	NA	NA	7	-6	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	51.4306268190463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGTCTATTGGTGGAG	NA	False	NA	-24	True	AATAAA	-37	NA	57445623	57427404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57432743_57432854_57433205_57433251_57435885_57435956_57440546_57440683_57445542
Isoform_92833_6	chr1	-	1213	9	FSM	ENSMUSG00000048495.17	ENSMUST00000160837.8	766	9	-27	-420	1	-6	multi-exon	FALSE	canonical	3	10	junction_4	49.931828526502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGTCTATTGGTGGAG	NA	False	NA	-24	True	AATAAA	-37	NA	57445629	57427404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57432828_57432854_57433205_57433251_57435885_57435956_57440546_57440683_57445542
Isoform_92834_30	chr1	-	1205	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	631	11	1	-8	multi-exon	FALSE	canonical	3	47	junction_6	29.7341966257639	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAAAGTCTATTGGTGG	NA	False	NA	-26	True	AATAAA	-35	NA	57445629	57427406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
Isoform_92835_4	chr1	-	1451	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	389	7	-38	-4	multi-exon	FALSE	canonical	3	47	junction_6	29.7341966257639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTATTGGTGGAGTG	NA	False	NA	-22	True	AATAAA	-39	NA	57445871	57427402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
Isoform_92836_47	chr1	-	1188	8	FSM	ENSMUSG00000048495.17	ENSMUST00000079998.13	1398	8	204	6	1	-6	multi-exon	FALSE	canonical	3	102	junction_6	15.7025930524684	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGTCTATTGGTGGAG	NA	False	NA	-24	True	AATAAA	-37	NA	57445629	57427404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
Isoform_92838_3	chr1	-	1874	7	NIC	ENSMUSG00000048495.17	novel	1398	8	NA	NA	1	-10	intron_retention	FALSE	canonical	3	102	junction_5	16.6774964814533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATAAAGTCTATTGGT	NA	False	NA	-28	True	AATAAA	-33	NA	57445629	57427408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_57427912_57429800_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
Isoform_9284_13	chr10	+	175	1	Intergenic	novelGene_893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACCCAAACAGCCAG	NA	False	NA	NA	False	NA	NA	NA	61281837	61282012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61281800_61282000
Isoform_92840_25	chr1	-	3043	7	NIC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	25.1859749331515	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATGTGACTTTTCTGT	NA	False	NA	-10	True	AATAAA	-14	NA	58009215	57994417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58008565
Isoform_92842_71	chr1	-	2422	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	81	9	1	-4	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGACTTTTCTGTGA	NA	False	NA	-8	True	AATAAA	-16	NA	58009206	57994415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
Isoform_92843_6	chr1	-	2599	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	49	-136	0	-11	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTCAGAAGGTGGTT	NA	False	NA	NA	False	AATAAA	-12	NA	58009238	57994270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
Isoform_92844_3	chr1	-	2700	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	-42	-146	-42	-1	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGTTTAACTGAGCA	NA	False	NA	NA	False	AATAAA	-22	NA	58009329	57994260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
Isoform_92845_18	chr1	-	2527	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	-24	9	-24	-4	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGACTTTTCTGTGA	NA	False	NA	-8	True	AATAAA	-16	NA	58009311	57994415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
Isoform_92846_3	chr1	-	3018	7	FSM	ENSMUSG00000054770.17	ENSMUST00000161608.8	2495	7	-528	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_6	29.1228241914978	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	58009211	57994416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58008565
Isoform_92847_4	chr1	-	2485	7	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	22.3737197026631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGACTTTTCTGTGA	NA	False	NA	-8	True	AATAAA	-16	NA	58009291	57994415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58009179
Isoform_92848_6	chr1	-	2403	7	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	22.3737197026631	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATGTGACTTTTCTGT	NA	False	NA	-10	True	AATAAA	-14	NA	58009211	57994417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58009179
Isoform_92849_3	chr1	-	4464	7	NNC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.9727421219503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	58009206	57994416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58003646_58003669_58004700_58006655_58006883_58009179
Isoform_9285_7	chr10	-	1660	1	Genic_Genomic	ENSMUSG00000020091.16	novel	NA	NA	NA	NA	-122	-18304	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61288562	61286902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_61286900_61288600
Isoform_92854_85	chr1	-	1752	13	FSM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	44	0	44	0	multi-exon	FALSE	canonical	3	45	junction_9	59.1577458063514	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463181	58451158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
Isoform_92855_51	chr1	-	1659	12	FSM	ENSMUSG00000026034.18	ENSMUST00000148330.8	1705	12	44	2	44	-2	multi-exon	FALSE	canonical	3	65	junction_9	47.751422461613	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGGTCTATAGCTTGG	NA	False	NA	-14	True	AATAAA	-18	NA	58463181	58451160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
Isoform_92857_12	chr1	-	3009	11	FSM	ENSMUSG00000026034.18	ENSMUST00000156931.8	4865	11	44	1812	44	-1	multi-exon	FALSE	canonical	3	126	junction_10	34.9097407609968	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTCTATAGCTTGGT	NA	False	NA	-13	True	AATAAA	-19	NA	58463181	58451159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58460468_58460932_58461094_58463078
Isoform_92858_5	chr1	-	2992	11	FSM	ENSMUSG00000026034.18	ENSMUST00000156931.8	4865	11	-1	1874	-1	-63	multi-exon	FALSE	canonical	3	126	junction_10	34.9097407609968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACATCTTTCAGTAATT	NA	False	NA	-6	True	ATTAAA	-16	NA	58463226	58451221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58460468_58460932_58461094_58463078
Isoform_92859_8	chr1	-	1494	11	FSM	ENSMUSG00000026034.18	ENSMUST00000151338.8	1538	11	44	0	44	0	multi-exon	FALSE	canonical	3	9	junction_6	69.2961759406679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463181	58451158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
Isoform_9286_46	chr10	+	188	1	Intergenic	novelGene_894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATAAATCATCTT	NA	False	NA	NA	False	NA	NA	NA	61323190	61323378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61323200_61323400
Isoform_92861_3	chr1	-	1365	7	FSM	ENSMUSG00000026035.16	ENSMUST00000117069.8	1363	7	-5	3	0	0	multi-exon	FALSE	canonical	3	14	junction_6	68.4505092911822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGAGTGTCCTTTTTT	NA	False	NA	-2	True	AATAGA	-25	NA	58484593	58470155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58483969
Isoform_92862_59	chr1	-	1050	7	FSM	ENSMUSG00000026035.16	ENSMUST00000114348.8	1033	7	-19	2	-14	1	multi-exon	FALSE	canonical	3	104	junction_6	35.853482707015	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGAGTGTCCTTTTTTT	NA	False	NA	-1	True	AATAGA	-26	NA	58484612	58470154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
Isoform_92865_14	chr1	-	874	7	FSM	ENSMUSG00000026035.16	ENSMUST00000081677.12	896	7	20	2	16	-2	multi-exon	FALSE	canonical	3	28	junction_6	63.3151289626386	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGTGAGTGTCCTTTT	NA	False	NA	-4	True	AATAGA	-23	NA	58484625	58470157	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484490
Isoform_92866_20	chr1	-	813	7	NIC	ENSMUSG00000026035.16	novel	896	7	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	60.3869467131212	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACATGTGAGTGTCCT	NA	False	NA	-7	True	AATAGA	-20	NA	58484645	58470160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484568
Isoform_92867_5	chr1	-	751	6	FSM	ENSMUSG00000026035.16	ENSMUST00000114345.9	1175	6	-117	541	0	87	multi-exon	FALSE	canonical	3	104	junction_5	38.958439393795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGTCATCTCTTTCTT	NA	False	NA	0	True	AATATA	-17	NA	58484645	58473486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
Isoform_9287_6	chr10	+	175	1	Intergenic	novelGene_895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAACTAACATA	4789	False	NA	NA	False	NA	NA	NA	61356796	61356971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61356800_61357000
Isoform_92870_27	chr1	-	3369	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTGTAGTTTTGTTT	NA	False	NA	-3	True	AATAAA	-20	NA	58544085	58501932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
Isoform_92873_41	chr1	-	2948	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-1	-424	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGGTCTGCACTTT	NA	False	NA	1	True	AATAAA	-19	NA	58544085	58502353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
Isoform_92874_22	chr1	-	2991	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-14	-424	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGGTCTGCACTTT	NA	False	NA	1	True	AATAAA	-19	NA	58544128	58502353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
Isoform_92876_16	chr1	-	3403	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTAGTTTTGTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	58544118	58501931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
Isoform_92881_156	chr1	-	2954	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	183	424	-1	-424	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGGTCTGCACTTT	NA	False	NA	1	True	AATAAA	-19	NA	58544085	58502353	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
Isoform_92883_94	chr1	-	2986	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	150	425	-4	-425	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58544118	58502354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
Isoform_92884_74	chr1	-	3381	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	180	0	-4	0	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTAGTTTTGTTTTGA	NA	False	NA	0	True	AATAAA	-23	NA	58544088	58501929	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
Isoform_92886_43	chr1	-	3408	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	150	3	-4	-3	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTGTAGTTTTGTTT	NA	False	NA	-3	True	AATAAA	-20	NA	58544118	58501932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
Isoform_929_92	SIRV5	-	226	1	FSM	SIRV5B	SIRV512	229	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAACATGTTAGACCTT	NA	False	NA	NA	False	AATATA	-21	NA	2405	2179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_-_2200_2400
Isoform_9290_17	chr10	-	177	1	Antisense	novelGene_ENSMUSG00000112255.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAGAGAGAGAGAAAGAG	7395	False	NA	NA	False	NA	NA	NA	61409308	61409131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_61409100_61409300
Isoform_92901_5	chr1	-	8658	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	20	7	-6	-7	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGATTTCCCTGAGTTG	NA	False	NA	-6	True	TATAAA	-23	NA	58625462	58561971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
Isoform_92902_7	chr1	-	5374	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	18	3293	-8	922	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAGTGTTTCTAACTAT	NA	False	NA	NA	False	AATAAA	-17	NA	58625464	58565257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
Isoform_92904_5	chr1	-	6234	16	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	13.2839083940767	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTCCTTGTGATT	1494	False	NA	-2	True	AATAAA	-39	NA	59012642	58939609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_58943342_58945864_58945971_58947687_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
Isoform_92905_6	chr1	-	6116	16	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	65	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	13.2839083940767	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCCTTGTGATTT	1613	False	NA	-1	True	AATAAA	-40	NA	59012523	58939608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_-_58943342_58945864_58945971_58947687_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
Isoform_92907_15	chr1	-	4089	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	69	2031	68	1024	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTGCTTGCTTTGAAA	1616	False	NA	NA	False	ATTAAA	-19	NA	59012520	58941638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
Isoform_92908_8	chr1	-	4210	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	-51	2030	-51	1025	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGCTTGCTTTGAAAG	1496	False	NA	NA	False	ATTAAA	-20	NA	59012640	58941637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
Isoform_9291_16	chr10	+	179	1	Intergenic	novelGene_896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGTGTACATACA	NA	False	NA	NA	False	NA	NA	NA	61464476	61464655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61464500_61464700
Isoform_92910_15	chr1	-	6119	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	69	1	68	-1	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCCTTGTGATTT	1616	False	NA	-1	True	AATAAA	-40	NA	59012520	58939608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
Isoform_92911_15	chr1	-	6189	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	-2	2	-2	-2	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTCCTTGTGATT	1545	False	NA	-2	True	AATAAA	-39	NA	59012591	58939609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
Isoform_92913_3	chr1	-	1901	13	FSM	ENSMUSG00000072295.8	ENSMUST00000097080.4	2131	13	4	226	-3	-226	multi-exon	FALSE	canonical	1	1	junction_7	3.19722101554181	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTAGAAACGTGTCTA	NA	False	NA	NA	False	AATAAA	-21	NA	59134055	59089890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_59090445_59091654_59091693_59097814_59097879_59099730_59099837_59101554_59101690_59105308_59105389_59106935_59107005_59107841_59107887_59108875_59109002_59114155_59114302_59115829_59115882_59117041_59117129_59133656
Isoform_92915_94	chr1	-	1809	12	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	16	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	59.5276170368229	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGAAGGTTTTTCCTT	4356	False	NA	-4	True	AATAAA	-30	NA	59158949	59139742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
Isoform_92917_11	chr1	-	1852	12	NIC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	73.6320986419185	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTTTATTAACTGAAG	4054	False	NA	-14	True	AATAAA	-20	NA	59159251	59139752	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59159110
Isoform_92919_11	chr1	-	1840	12	NIC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	2	29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	73.814711069325	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCGCCAGTTATTT	4054	False	NA	19	True	AATACA	-42	NA	59159251	59139719	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59159155
Isoform_9292_6	chr10	-	2017	1	Antisense	novelGene_ENSMUSG00000020089.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61495609	61493592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_61493600_61495600
Isoform_92921_20	chr1	-	1801	11	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	16	30	combination_of_known_splicesites	FALSE	canonical	3	28	junction_10	51.7934358775318	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGCGCCAGTTATTTT	4356	False	NA	20	True	AATACA	-43	NA	59158949	59139718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59158861
Isoform_92922_3	chr1	-	968	7	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	18	-225	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	73.2380062232415	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGAGTACTTTTCATA	4358	False	NA	NA	False	ATTAAA	-15	NA	59158947	59147578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
Isoform_92931_71	chr1	-	6337	34	FSM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	1	4	1	-4	multi-exon	TRUE	canonical	2	89	junction_12	16.3968238094348	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCTGTTCTATGACTGT	NA	False	NA	-2	True	AATAAA	-16	NA	59276389	59202088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
Isoform_92932_32	chr1	-	2964	13	FSM	ENSMUSG00000026024.15	ENSMUST00000159166.8	2977	13	0	13	0	-13	multi-exon	FALSE	canonical	2	94	junction_2	9.94847838728226	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATGTTG	NA	False	NA	NA	False	NA	NA	NA	59276390	59230780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
Isoform_92933_9	chr1	-	2145	8	ISM	ENSMUSG00000026024.15	ENSMUST00000159166.8	2977	13	30	14667	25	9375	5prime_fragment	FALSE	canonical	3	104	junction_1	7.16567783084826	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTCTTCTTTT	NA	False	NA	NA	False	AATGAA	-32	NA	59276360	59245434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
Isoform_92934_3	chr1	-	1876	3	ISM	ENSMUSG00000026024.15	ENSMUST00000159166.8	2977	13	10	24742	5	-7	5prime_fragment	FALSE	canonical	3	121	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	59276380	59255509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_59257241_59259533_59259612_59276313
Isoform_92935_5	chr1	+	1625	2	FSM	ENSMUSG00000037216.6	ENSMUST00000142670.2	812	2	-47	-766	-47	-2	multi-exon	TRUE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCCTTTTCCTTAA	NA	False	NA	13	True	ATTAAA	-13	NA	37911407	37915307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_37911670_37913944
Isoform_92938_565	chr1	+	708	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	64	197	-2	0	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37929621	37937419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
Isoform_92939_148	chr1	+	627	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	9	26	-2	0	multi-exon	FALSE	canonical	3	190	junction_1	367.71796257458	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37929621	37937419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
Isoform_92940_12	chr1	+	2283	6	NIC	ENSMUSG00000026087.12	novel	969	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	395.588978612903	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37929634	37937419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_37931254_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
Isoform_92961_1090	chr1	+	4124	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	114	3559	-5	-1	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGCTTCTACAGATTTT	1403	False	NA	36	True	ATTAAA	-23	NA	38037204	38091101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
Isoform_92963_38	chr1	+	4373	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	114	3310	-5	248	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTCTGCTAGGCCTCC	1403	False	NA	10	True	AATAAA	-20	NA	38037204	38091350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
Isoform_9299_11	chr10	+	174	1	Intergenic	novelGene_897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	61554401	61554575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61554400_61554600
Isoform_93_56	ERCC-00078	+	975	1	FSM	ERCC-00078A	DQ883673	977	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	976	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00078_+_0_1000
Isoform_9300_5	chr10	-	216	2	Antisense	novelGene_ENSMUSG00000020085.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAATAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	61555017	61554776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_61554880_61554904
Isoform_93005_446	chr1	+	2561	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	3	330	junction_4	508.177450294338	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACATGTTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	4928017	4968126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959682_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
Isoform_9301_5	chr10	+	180	1	Intergenic	novelGene_898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGATGTACTTATTT	NA	False	NA	NA	False	NA	NA	NA	61608619	61608799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61608600_61608800
Isoform_93014_2522	chr1	+	2546	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-1	2	-1	-2	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	2522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACATGTTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	4928035	4968126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
Isoform_93018_85	chr1	+	2671	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-120	-4	-120	0	multi-exon	TRUE	canonical	3	1526	junction_2	186.842443693696	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTTTGTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	4927916	4968132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
Isoform_93020_87	chr1	+	1317	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-23	1253	-23	-1253	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGTTGATCTGTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	4928013	4966875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
Isoform_93030_56	chr1	+	1732	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2183	-1	-50	1	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGTAAGATTTATTT	NA	False	NA	4	True	AATACA	-14	NA	39026871	39036320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
Isoform_9304_3	chr10	+	1389	1	Antisense	novelGene_ENSMUSG00000020086.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTAGCATTGAGCGAA	NA	False	NA	NA	False	NA	NA	NA	61619212	61620601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_61619200_61620600
Isoform_93045_930	chr1	+	443	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	65	541	-22	4	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGGTTTTCCTTTCTG	NA	False	NA	30	True	AATAAA	-19	NA	39406987	39410451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
Isoform_93046_534	chr1	+	518	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	-14	545	-14	0	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39406908	39410447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
Isoform_93048_26	chr1	+	972	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	75	2	-12	-2	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCATGGTTTGAACATGT	NA	False	NA	8	True	ATTAAA	-21	NA	39406997	39410990	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
Isoform_9305_14	chr10	-	172	1	Intergenic	novelGene_899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	61649897	61649725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_61649700_61649900
Isoform_93054_442	chr1	+	486	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	3	-2	3	0	multi-exon	FALSE	canonical	3	1086	junction_1	4596.75456164455	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39407012	39410447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
Isoform_9306_46	chr10	-	176	1	Intergenic	novelGene_900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTTTAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	61680332	61680156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_61680200_61680300
Isoform_93060_152	chr1	+	628	4	FSM	ENSMUSG00000073702.12	ENSMUST00000179954.8	630	4	3	-1	3	0	multi-exon	FALSE	canonical	3	8615	junction_3	1758.8270712798	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39407012	39410447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39407337_39409094_39409221_39410034_39410148_39410382
Isoform_9307_71	chr10	-	2803	1	Intergenic	novelGene_901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61768344	61765541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_61765500_61768300
Isoform_93071_71	chr1	+	3209	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-44	-3	-44	3	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAATATTAGA	NA	False	NA	NA	False	NA	NA	NA	39574838	39585957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_93072_139	chr1	+	3175	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-10	-3	-10	3	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAATATTAGA	NA	False	NA	NA	False	NA	NA	NA	39574872	39585957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_93075_220	chr1	+	1713	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-44	1493	-44	-21	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAATTTCCTTTTTCC	NA	False	NA	6	True	TATAAA	-17	NA	39574838	39584461	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_93077_41	chr1	+	1808	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-119	1473	-119	-1	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTTTCCCATGGATGA	NA	False	NA	26	True	AGTAAA	-14	NA	39574763	39584481	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_93078_747	chr1	+	1701	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-10	1471	-10	1	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTCCCATGGATGAAT	NA	False	NA	28	True	AGTAAA	-16	NA	39574872	39584483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_93084_80	chr1	+	1519	6	NIC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	7	1	intron_retention	FALSE	canonical	3	64	junction_1	290.336769975833	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTCCCATGGATGAAT	NA	False	NA	28	True	AGTAAA	-16	NA	39574889	39584483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_39575419_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_93087_7	chr1	+	4577	31	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	26.1908380927377	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940049	40064128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
Isoform_93088_11	chr1	+	4362	30	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	23.9127924112531	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39940073	40064129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
Isoform_93089_3	chr1	+	4571	31	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_15	28.5922289364708	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940049	40064128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
Isoform_93091_10	chr1	+	4147	29	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	25.9180419391432	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39940057	40064129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
Isoform_93094_9	chr1	+	4484	31	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	26.6174754625603	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940049	40064128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
Isoform_93096_24	chr1	+	4279	30	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	24.4259661839409	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940062	40064128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
Isoform_93097_3	chr1	+	4054	29	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	26.3961915543025	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940056	40064128	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
Isoform_931_2517	SIRV5	+	2472	1	FSM	SIRV5A	SIRV504	2473	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2517	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11134	13606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV5_+_11100_13600
Isoform_9310_40	chr10	+	204	1	Intergenic	novelGene_902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAAAAAAATCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	61794937	61795141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61794900_61795100
Isoform_93103_8	chr1	+	1260	8	ISM	ENSMUSG00000026073.14	ENSMUST00000027243.13	1419	9	17716	12	16429	0	3prime_fragment	FALSE	canonical	1	2	junction_5	1.35526185435788	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATACGAGAGTGACCC	NA	False	NA	NA	False	AATAAA	-8	NA	40141573	40164379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_40141698_40144423_40144683_40151114_40151296_40154183_40154359_40157114_40157178_40160068_40160205_40162281_40162425_40164200
Isoform_93105_180	chr1	+	1930	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	36	83	6	27	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTCTTAAATTTTGC	NA	False	NA	15	True	ATTAAA	-15	NA	5153338	5232669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_93106_63	chr1	+	2014	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	50	-15	-2	15	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAAATGTTTTGAAATG	NA	False	NA	113	True	AATAAA	-32	NA	5153352	5232767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_93107_9	chr1	+	2660	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	71	-682	-3	682	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTTCTTTTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	5153373	5233434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_93109_21	chr1	+	2060	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	4	-15	4	15	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAAATGTTTTGAAATG	NA	False	NA	113	True	AATAAA	-32	NA	5153306	5232767	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_9311_30	chr10	+	177	1	Intergenic	novelGene_903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	61802361	61802538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61802400_61802500
Isoform_93111_53	chr1	+	1841	13	FSM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	-3	-27	-3	27	multi-exon	FALSE	canonical	3	60	junction_6	140.296783640966	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTCTTAAATTTTGC	NA	False	NA	15	True	ATTAAA	-15	NA	5153373	5232669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_93113_6	chr1	+	2372	14	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	6	12	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	139.358420021071	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGTAAATGTTTTGAA	NA	False	NA	110	True	AATAAA	-29	NA	5153338	5232764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_93115_19	chr1	+	2242	14	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	-3	27	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	139.358420021071	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTCTTAAATTTTGC	NA	False	NA	15	True	ATTAAA	-15	NA	5153373	5232669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_93117_6	chr1	+	2189	13	NIC	ENSMUSG00000033793.13	novel	1811	13	NA	NA	-4	27	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	186.594182355423	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTCTTAAATTTTGC	NA	False	NA	15	True	ATTAAA	-15	NA	5153372	5232669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_9312_7	chr10	+	177	1	Intergenic	novelGene_904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACAGTACACCTC	NA	False	NA	NA	False	NA	NA	NA	61883461	61883638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_61883500_61883600
Isoform_93122_9	chr1	+	1495	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	265.216892373016	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890424	42944843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42927014_42927123_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
Isoform_93124_786	chr1	+	1387	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	32	-1	-11	0	multi-exon	FALSE	canonical	3	624	junction_3	42.3685024517034	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890424	42944843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
Isoform_93133_426	chr1	+	3406	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	45	7	45	-7	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATCTTGAGCAGGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	43137914	43155100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
Isoform_93134_26	chr1	+	3493	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	19	-54	19	54	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGTGACTGAAGAAACT	NA	False	NA	NA	False	AATAAA	-21	NA	43137888	43155161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
Isoform_93137_10	chr1	+	3037	3	NIC	ENSMUSG00000010290.8	novel	3458	4	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	104	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCAGGCCTGTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	43137914	43155107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_43138023_43139874_43140042_43152345
Isoform_93139_253	chr1	+	2731	5	FSM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	41	0	41	0	multi-exon	FALSE	canonical	3	156	junction_4	15.4757875405422	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCTGTGTGTTTGTGTT	NA	False	NA	11	True	AATAAA	-15	NA	43484951	43609675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020_43593743_43608307
Isoform_93140_27	chr1	+	2805	5	FSM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	-31	-2	-31	2	multi-exon	FALSE	canonical	3	156	junction_4	15.4757875405422	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGTGTGTTTGTGTTTT	NA	False	NA	13	True	AATAAA	-17	NA	43484879	43609677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020_43593743_43608307
Isoform_93148_56	chr1	+	4652	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	20	-23	-6	-6	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATTCACAATTGGTCT	3324	False	NA	2	True	AATAAA	-12	NA	43973186	44042154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
Isoform_93149_83	chr1	+	4007	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	8	634	0	1	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTCAGTGGCGTGTGG	3312	False	NA	5	True	ATTAAA	-18	NA	43973174	44041497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
Isoform_9315_5	chr10	+	1585	1	FSM	ENSMUSG00000046687.7	ENSMUST00000053865.7	1240	1	-98	-247	-98	247	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	61906803	61908388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_61906800_61908400
Isoform_93156_248	chr1	+	4619	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	12	0	-6	0	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3324	False	NA	8	True	AATAAA	-18	NA	43973186	44042160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
Isoform_93157_334	chr1	+	3958	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	12	661	-6	3	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCAGTGGCGTGTGGCT	3324	False	NA	7	True	ATTAAA	-20	NA	43973186	44041499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
Isoform_9316_3	chr10	-	2789	1	NIC	ENSMUSG00000020083.14	novel	1769	4	NA	NA	15	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	False	NA	-10	True	AATAAA	-21	NA	61946777	61943988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_61944000_61946800
Isoform_93168_21	chr1	+	3325	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	4	6	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.7317151150175	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTATGAATTTTAATGTC	NA	False	NA	20	True	AATAAA	-20	NA	44158120	44183676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_44158336_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
Isoform_9317_100	chr10	-	161	1	Intergenic	novelGene_905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACCTCATATAAATAAA	1895	False	NA	NA	False	NA	NA	NA	61977257	61977096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_61977100_61977300
Isoform_93170_28	chr1	+	3336	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	13	6	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	12.9479728143057	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTATGAATTTTAATGTC	NA	False	NA	20	True	AATAAA	-20	NA	44158129	44183676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_44158356_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
Isoform_93171_3	chr1	+	3528	11	FSM	ENSMUSG00000041684.12	ENSMUST00000035991.8	3313	11	-205	-10	0	10	multi-exon	FALSE	canonical	0	0	junction_1	17.2594901431068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATTTTAATGTCTATG	NA	False	NA	24	True	AATAAA	-24	NA	44158116	44183680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_44158531_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
Isoform_93173_14	chr1	+	3200	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	116	254	105	6	multi-exon	FALSE	canonical	3	41	junction_1	6.90857402520436	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTATGAATTTTAATGTC	NA	False	NA	20	True	AATAAA	-20	NA	44159243	44183676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
Isoform_93175_3	chr1	+	3808	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	-491	253	-31	7	multi-exon	FALSE	canonical	3	41	junction_1	6.90857402520436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAATTTTAATGTCT	NA	False	NA	21	True	AATAAA	-21	NA	44158636	44183677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
Isoform_93177_3	chr1	+	3634	15	NIC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	9	-93	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	32.5526261519367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGAATGTATAGTT	NA	False	NA	1	True	ATTAAA	-16	NA	44187077	44220327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_44187126_44196096_44196273_44197303_44197496_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218306_44218392_44219690
Isoform_93179_5	chr1	+	3812	15	NIC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	6	-14	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	37.6449579245728	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTACATCTGTTTTAC	NA	False	NA	80	True	ATTAAA	-26	NA	44187074	44220406	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_44187298_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218306_44218392_44219690
Isoform_93181_118	chr1	+	3747	15	FSM	ENSMUSG00000026048.17	ENSMUST00000027214.4	3907	15	69	91	7	-91	multi-exon	FALSE	canonical	0	0	junction_3	30.0296622066399	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATGTATAGTTTT	NA	False	NA	3	True	ATTAAA	-18	NA	44187075	44220329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_44187311_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218306_44218392_44219690
Isoform_93183_34	chr1	+	3826	15	FSM	ENSMUSG00000026048.17	ENSMUST00000027214.4	3907	15	69	12	7	-12	multi-exon	FALSE	canonical	0	0	junction_3	30.0296622066399	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACATCTGTTTTACTA	NA	False	NA	82	True	ATTAAA	-28	NA	44187075	44220408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_44187311_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218306_44218392_44219690
Isoform_93192_24	chr1	+	6530	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	19	1058	1	13	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTCAATGACATCTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	6284887	6345814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
Isoform_93193_41	chr1	+	6104	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	20	1483	2	-410	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGTGCCTTTTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	6284888	6345389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
Isoform_93195_6	chr1	+	7315	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	20	272	2	-272	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGCCTATAAATGCAGCA	NA	False	NA	NA	False	AATAAA	-20	NA	6284888	6346600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
Isoform_93197_35	chr1	+	2970	11	FSM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	156	12	-26	0	multi-exon	FALSE	canonical	3	15	junction_7	3.104834939252	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATTAAACTGTATGA	NA	False	NA	NA	False	AATAAA	-8	NA	44590826	44835986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
Isoform_9320_22	chr10	-	2175	1	NIC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	399	-22448	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAACAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	62175922	62173747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62173700_62175900
Isoform_93207_1230	chr1	+	2605	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	345	3	4	0	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAAAGCCTTGTGTT	NA	False	NA	5	True	TATAAA	-21	NA	45834670	45862776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
Isoform_93208_248	chr1	+	2652	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	297	4	14	-1	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTAAAGCCTTGTGT	NA	False	NA	4	True	TATAAA	-20	NA	45834622	45862775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
Isoform_9322_6	chr10	+	166	1	Intergenic	novelGene_906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	62182897	62183063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62182900_62183100
Isoform_93222_9	chr1	+	5186	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	44.3867942072865	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCACTTAGTCTCTGTG	NA	False	NA	19	True	AATAAA	-32	NA	136494421	136557794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552598_136552790_136553009
Isoform_9323_118	chrX	-	177	1	Intergenic	novelGene_12305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTTAGGTT	7954	False	NA	NA	False	NA	NA	NA	161538796	161538619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_-_161538600_161538800
Isoform_93230_10	chr1	+	5128	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	57.5577005177317	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGGAGATATCACTTA	NA	False	NA	10	True	AATAAA	-23	NA	136494421	136557785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_136494541_136551065_136551108_136552598_136552790_136553009
Isoform_93238_131	chr1	+	924	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_1	233.142779333943	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTGTTTATATGAAA	NA	False	NA	13	True	AATAAA	-15	NA	134890315	134901898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_134890348_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
Isoform_93239_85	chr1	+	177	2	Antisense	novelGene_ENSMUSG00000073538.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	271	junction_1	0	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGCAAATGAAGA	NA	False	NA	NA	False	NA	NA	NA	153287688	153292537	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_153287738_153292409
Isoform_93240_7	chr1	+	2284	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	22.8624145706441	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170315	183191018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189544_183190053
Isoform_93241_14	chr1	+	2302	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	14.0996453856117	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170336	183191018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
Isoform_93242_8	chr1	+	1498	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-10	-828	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	14.0996453856117	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCTACAGTGTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	183170314	183190192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
Isoform_93243_3	chr1	+	2252	10	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	25.0998007960223	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAGTAGTATTTTATT	NA	False	NA	15	True	AATAAA	-26	NA	183170320	183191019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187725_183187850_183189427_183189583_183190053
Isoform_93244_4	chr1	+	4345	9	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	38	junction_1	15.1734760355035	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	16	True	AATAAA	-27	NA	183170314	183191020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183187850_183189427_183189583_183190053
Isoform_93245_26	chr1	+	2122	3	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	10	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTTGGATTGTAGTTG	NA	False	NA	5	True	AATAAA	-18	NA	189576863	189584176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_189576951_189578530_189578610_189582220
Isoform_93246_7	chr1	+	2851	9	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	168	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	6.18339510301582	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTGTGAGTTATTAT	NA	False	NA	NA	False	NA	NA	NA	189576863	189602433	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_189576951_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
Isoform_93247_4	chr1	+	2921	9	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	238	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	6.18339510301582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACACGTTGACTGATC	NA	False	NA	NA	False	AATATA	-14	NA	189576863	189602503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_189576951_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
Isoform_93248_3	chr1	+	2041	2	NNC	ENSMUSG00000026604.18	novel	10746	19	NA	NA	-376	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGTTGGATTGTAGT	NA	False	NA	3	True	AATAAA	-16	NA	189576863	189584174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_189576951_189582220
Isoform_93250_31	chr1	+	553	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3186	-2	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	24.4176620957499	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCATGCCTCTTGTGTC	NA	False	NA	9	True	AATAAA	-15	NA	171049436	171053940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_171049548_171052855_171052936_171053234_171053368_171053711
Isoform_93251_3	chr1	+	642	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3277	-4	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	24.4176620957499	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCATGCCTCTTGTG	NA	False	NA	7	True	AATAAA	-13	NA	171049345	171053938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_171049548_171052855_171052936_171053234_171053368_171053711
Isoform_93257_35	chr1	+	969	2	Intergenic	novelGene_657	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATAAATGCA	2274	False	NA	NA	False	NA	NA	NA	181856046	181857397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181856461_181856842
Isoform_93259_20	chr1	+	4012	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	304	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	96.3872398193869	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTCTTGTGTCTTTGTCC	NA	False	NA	15	True	AATAAA	-16	NA	152969529	152995009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_152969599_152969782_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_93262_6	chr1	+	7302	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	47	1930	intron_retention	FALSE	non_canonical	0	0	junction_30	15.9389111575694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGCCTCCTAATCCAG	NA	False	NA	23	True	AATAAA	-14	NA	136394127	136457314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456691_136456740
Isoform_93263_8	chr1	+	1045	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3311	193	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	18.4867520132661	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGTATTCGAACATTG	NA	False	NA	15	True	AATAAA	-21	NA	21327055	21335438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
Isoform_93264_10	chr1	+	996	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3357	190	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	18.4867520132661	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTGGAGTATTCGAACA	NA	False	NA	12	True	AATAAA	-18	NA	21327101	21335435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
Isoform_93265_11	chr1	+	1957	11	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-2418	-39	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	308.297275369083	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTTTGTTCTATTCCAT	NA	False	NA	12	True	ATTAAA	-17	NA	15873451	15913655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_15873599_15875706_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
Isoform_93268_5	chr1	+	3895	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	63088	-1263	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	47.2566132938026	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGCCTTTTCAAAT	NA	False	NA	34	True	AGTAAA	-28	NA	89061262	89081527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_89061688_89065280_89065526_89071271_89073629_89079921_89080111_89080848
Isoform_93269_5	chr1	+	3833	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	63153	-1260	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	47.2566132938026	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCCTTTTCAAATTAT	NA	False	NA	37	True	AGTAAA	-31	NA	89061327	89081530	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_89061688_89065280_89065526_89071271_89073629_89079921_89080111_89080848
Isoform_93270_7	chr1	+	2341	6	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	21648	0	intron_retention	FALSE	canonical	2	8	junction_1	77.9717897704035	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165979683	165994079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_165980032_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_93272_8	chr1	+	4059	5	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	98.9709553353912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTGTCTTTGTCCA	NA	False	NA	16	True	AATAAA	-17	NA	152969242	152995010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_152969358_152969782_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_93275_12	chr1	+	1920	5	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	24529	0	intron_retention	FALSE	canonical	3	12	junction_1	75.0083328704218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165982564	165994079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_165982709_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_93277_16	chr1	+	2472	12	NNC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	124.599258451291	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGGATCAGCTGGCTGA	NA	False	NA	6	True	AATAAA	-17	NA	63769842	63791625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_63770096_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
Isoform_93278_5	chr1	+	518	3	Antisense	novelGene_ENSMUSG00000099860.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAACAATAACCAGGT	NA	False	NA	NA	False	NA	NA	NA	119233328	119247231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_119233438_119234108_119234328_119247041
Isoform_93280_6	chr1	+	3638	11	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	-17	-1090	intron_retention	FALSE	canonical	2	5	junction_1	15.9762323468332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGAGTTTAGAAACTT	NA	False	NA	NA	False	ATTAAA	-19	NA	139350102	139375831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_139350334_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_93283_3	chr1	+	481	2	Intergenic	novelGene_541	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTTGCAATTGT	8	True	NA	NA	False	AAAACA	-13	NA	161705514	161709156	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_161705610_161708770
Isoform_93287_42	chr1	+	2588	24	FSM	ENSMUSG00000062939.12	ENSMUST00000027277.7	2982	24	394	0	11	0	multi-exon	FALSE	canonical	3	8	junction_15	7.16402480577569	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTGTTTCTGGTTTT	NA	False	NA	NA	False	AATATA	-18	NA	52047795	52146343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_52047888_52050941_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122020_52122039_52122136_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
Isoform_93288_3	chr1	+	2461	23	NIC	ENSMUSG00000062939.12	novel	2982	24	NA	NA	9	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_1	7.64933962471368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTGTTTCTGGTTTT	NA	False	NA	NA	False	AATATA	-18	NA	52047793	52146343	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_52047888_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122020_52122039_52122136_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
Isoform_93289_5	chr1	+	3572	19	NNC	ENSMUSG00000026585.14	novel	4012	21	NA	NA	4425	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.5233579990328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTCCAACTCTCATT	NA	False	NA	12	True	ATTAAA	-19	NA	163611576	163744672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_163611661_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
Isoform_93290_3	chr1	+	3464	11	NNC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-25	-1088	intron_retention	FALSE	canonical	3	11	junction_1	14.3582728766381	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGTTTAGAAACTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	139350000	139375833	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_139350056_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_93292_4	chr1	+	2520	6	NNC	ENSMUSG00000040836.16	novel	1827	6	NA	NA	-13954	50	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1.2	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCTGACTTCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	165109403	165149416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_165110147_165133746_165134162_165137837_165138563_165144808_165144914_165146317_165146438_165149004
Isoform_93293_8	chr1	+	3525	18	NNC	ENSMUSG00000037995.16	novel	636	6	NA	NA	-972	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.67635293929406	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCACCTCTCTTTGT	109	False	NA	4	True	AATAAA	-16	NA	172317681	172326444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_172317728_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
Isoform_93297_5	chr1	+	2349	4	NNC	ENSMUSG00000104011.2	novel	540	3	NA	NA	-3949	495	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	3.29983164553722	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGACTGTGTTGTGTCGT	7947	False	NA	NA	False	NA	NA	NA	164286061	164292053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_164287310_164289944_164290168_164290325_164290407_164291256
Isoform_93298_3	chr1	+	2421	25	NNC	ENSMUSG00000026339.19	novel	3040	4	NA	NA	-11287	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	21.6810449087062	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTATTGAGCAACTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	121347490	121429318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_121347575_121356627_121356771_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
Isoform_93301_5	chr1	+	1884	2	NNC	ENSMUSG00000037216.6	novel	812	2	NA	NA	-45	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTCCTTTTCCTTA	NA	False	NA	12	True	ATTAAA	-12	NA	37911409	37915306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_37911932_37913944
Isoform_93302_3	chr1	+	3306	12	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	10545	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6.79936798229642	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTGGATTGTAGTT	NA	False	NA	4	True	AATAAA	-17	NA	189529413	189584175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_189529873_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
Isoform_93303_6	chr1	+	561	2	Intergenic	novelGene_647	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGCAGTTGAACCT	NA	False	NA	NA	False	AATAAA	-18	NA	181061459	181062290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181061702_181061971
Isoform_93306_3	chr1	+	4136	25	NIC	ENSMUSG00000026104.15	novel	4241	25	NA	NA	-13	-83	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	9.12414379544733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTATGAGTTGGTTTA	3285	False	NA	NA	False	TATAAA	-16	NA	52158635	52200083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_52158768_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
Isoform_93307_3	chr1	+	4169	25	FSM	ENSMUSG00000026104.15	ENSMUST00000186857.7	4241	25	-9	81	-7	-81	multi-exon	FALSE	canonical	3	7	junction_1	8.12649558884736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTATGAGTTGGTTTAAT	3291	False	NA	NA	False	TATAAA	-18	NA	52158641	52200085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_52158768_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
Isoform_93308_4	chr1	+	1929	10	NNC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	5203	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15.1836494255019	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCTCTCATGCTTC	NA	False	NA	7	True	AATAAA	-23	NA	180792834	180802669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_180792955_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_93309_3	chr1	+	4056	25	NIC	ENSMUSG00000026104.15	novel	5151	25	NA	NA	2	-81	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8.09663853432741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTATGAGTTGGTTTAAT	3382	False	NA	NA	False	TATAAA	-18	NA	52158732	52200085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_52158783_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
Isoform_93310_10	chr1	+	2785	23	FSM	ENSMUSG00000026104.15	ENSMUST00000186574.7	2834	23	11	38	-4	-38	multi-exon	FALSE	canonical	3	19	junction_12	6.78598458418965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCATGAAT	3259	False	NA	NA	False	NA	NA	NA	52158609	52194533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144
Isoform_93313_11	chr1	+	3294	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	29	1828	-6	477	multi-exon	FALSE	canonical	3	19	junction_12	6.79038842777054	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGGGGCCAGCTTTCTT	3292	False	NA	NA	False	AATAAA	-19	NA	52158642	52199196	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
Isoform_93317_6	chr1	+	4090	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	121	940	4	-82	multi-exon	FALSE	canonical	3	19	junction_12	6.79038842777054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTATGAGTTGGTTTAA	3384	False	NA	NA	False	TATAAA	-17	NA	52158734	52200084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
Isoform_93319_3	chr1	+	2068	2	NNC	ENSMUSG00000026604.18	novel	10746	19	NA	NA	4779	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGTTGGATTGTAGT	NA	False	NA	3	True	AATAAA	-16	NA	189582018	189584174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_189582133_189582220
Isoform_9332_11	chr10	-	169	1	Intergenic	novelGene_720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAACAGATA	NA	False	NA	NA	False	NA	NA	NA	7559587	7559418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_7559400_7559600
Isoform_93321_4	chr1	+	868	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3536	199	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.8644324286721	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCGAACATTGTCATTC	NA	False	NA	21	True	AATAAA	-27	NA	21327280	21335444	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_21327312_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
Isoform_93325_3	chr1	+	772	3	NNC	ENSMUSG00000102531.2	novel	566	2	NA	NA	-4558	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCCTTTGTCAGCATA	NA	False	NA	NA	False	NA	NA	NA	35914367	35920201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_35914437_35918789_35919054_35919762
Isoform_93326_43	chr1	+	3352	9	FSM	ENSMUSG00000043015.16	ENSMUST00000165859.8	3396	9	44	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	7.49061913328932	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669905	52691078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682280_52682396_52684419_52684646_52687908_52688086_52688864
Isoform_93328_29	chr1	+	3318	9	FSM	ENSMUSG00000043015.16	ENSMUST00000185483.7	2023	9	-12	-1283	-2	0	multi-exon	FALSE	canonical	3	20	junction_5	9.4794184948234	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669893	52691078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682326_52682396_52684419_52684646_52687908_52688086_52688864
Isoform_9333_68	chr10	+	153	1	Intergenic	novelGene_907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAATAATTAA	NA	False	NA	NA	False	NA	NA	NA	62359044	62359197	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62359000_62359200
Isoform_93331_10	chr1	+	2641	4	NIC	ENSMUSG00000043015.16	novel	3247	8	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	18.263503375737	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669876	52691078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_52670011_52676523_52676640_52687908_52688086_52688864
Isoform_93333_3	chr1	+	1904	11	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-10	14592	-8	5074	5prime_fragment	FALSE	canonical	3	80	junction_5	9.19565114605812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTCTCCATTTTCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	52884194	52945553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529
Isoform_93334_119	chr1	+	1707	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-3	126	-1	-121	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGTGTTGATGCCT	NA	False	NA	5	True	AATAAA	-15	NA	52884201	52960019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
Isoform_93336_3	chr1	+	3029	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-7	-1192	-5	1192	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAACCCAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	52884197	52961337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
Isoform_93337_3	chr1	+	5056	3	ISM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	8	66	8	-66	intron_retention	FALSE	canonical	3	184	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAGTTTTCCAAGAC	NA	False	NA	27	True	AATAAA	-21	NA	53336261	53349402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_53336348_53338130_53338312_53344613
Isoform_93338_188	chr1	+	1828	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	17	65	17	-65	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGTTTTCCAAGACA	NA	False	NA	28	True	AATAAA	-22	NA	53336270	53349403	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
Isoform_93339_3	chr1	+	2104	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	-8	-186	-8	186	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCCAGTTTAACTTCAT	NA	False	NA	NA	False	NA	NA	NA	53336245	53349654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
Isoform_93340_3	chr1	+	1914	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	4	-8	4	8	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGTTTAAGTACATTT	NA	False	NA	101	True	TATAAA	-16	NA	53336257	53349476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
Isoform_93346_14	chr1	+	1836	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	30	2	0	-2	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTGGCCTTGTGTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	53352812	53365500	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
Isoform_9335_78	chr10	-	172	1	Intergenic	novelGene_908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAGTCAAGG	NA	False	NA	NA	False	NA	NA	NA	62384261	62384089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62384100_62384300
Isoform_93351_3	chr1	+	3810	7	FSM	ENSMUSG00000025983.12	ENSMUST00000161988.2	1204	7	97	-2703	58	2703	multi-exon	FALSE	canonical	2	2	junction_2	2.3392781412697	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGCTGTGTGGCCCA	NA	False	NA	NA	False	AATAAA	-9	NA	54289938	54320823	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_54290045_54299082_54299247_54302602_54302824_54302932_54303112_54311636_54311706_54316812_54316930_54317869
Isoform_93353_137	chr1	+	1664	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	69	0	-30	0	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGTTATTTAAATCTTT	3628	False	NA	22	True	AATAAA	-28	NA	55091997	55111861	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
Isoform_93357_3	chr1	+	2265	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	71	-603	-28	603	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCATGTCTTACAAATA	3630	False	NA	NA	False	AATAAA	-16	NA	55091999	55112464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
Isoform_93359_3	chr1	+	4802	4	NIC	ENSMUSG00000025981.14	novel	1733	5	NA	NA	46	-8	intron_retention	FALSE	canonical	3	135	junction_3	25.8499946271217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGACCTTGGTTATTT	3605	False	NA	14	True	AATAAA	-20	NA	55091974	55111853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_55092150_55100433_55100584_55103339_55106758_55110794
Isoform_9336_20	chr10	+	172	1	Intergenic	novelGene_909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTTTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	62390831	62391003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62390800_62391000
Isoform_93363_214	chr1	+	626	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	158	-10	-24	10	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTAATTTAAGGTCGTT	NA	False	NA	23	True	AATAAA	-24	NA	55127448	55130476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_93364_2050	chr1	+	525	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	181	68	-1	-68	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTCTGACCTTTA	NA	False	NA	34	True	AATAAA	-22	NA	55127471	55130398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_93365_1296	chr1	+	600	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	181	-7	-1	7	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTAATTTAAGGTC	NA	False	NA	20	True	AATAAA	-21	NA	55127471	55130473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_93366_134	chr1	+	799	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	-16	-9	-16	9	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTAATTTAAGGTCGT	NA	False	NA	22	True	AATAAA	-23	NA	55127274	55130475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_93367_180	chr1	+	689	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	17	68	17	-68	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTCTGACCTTTA	NA	False	NA	34	True	AATAAA	-22	NA	55127307	55130398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_93368_303	chr1	+	549	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	157	68	-25	-68	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTCTGACCTTTA	NA	False	NA	34	True	AATAAA	-22	NA	55127447	55130398	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_9338_22	chr6	-	185	1	Intergenic	novelGene_9280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	5814	False	NA	NA	False	NA	NA	NA	38340118	38339933	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr6_-_38339900_38340100
Isoform_93383_80	chr1	+	2731	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	58	51	2	-50	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCCTCCCTGTAGTAT	NA	False	NA	24	True	AATAAA	-24	NA	55170447	55194007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
Isoform_93384_28	chr1	+	2781	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	58	1	2	0	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTTTGTATTCTTGCTT	NA	False	NA	12	True	CATAAA	-12	NA	55170447	55194057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
Isoform_93395_117	chr1	+	2974	2	FSM	ENSMUSG00000038323.4	ENSMUST00000042734.3	3008	2	32	2	12	-2	multi-exon	FALSE	canonical	3	44	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTATTTGGATGTGTTT	NA	False	NA	6	True	ATTAAA	-17	NA	57416810	57424580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_57417106_57421901
Isoform_93396_196	chr1	+	1065	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	427	2048	-4	-2048	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTAGTGTTCTTTAAA	NA	False	NA	10	True	AATAAA	-13	NA	57445913	57455064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
Isoform_93398_5	chr1	+	1402	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	90	2048	90	-2048	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTAGTGTTCTTTAAA	NA	False	NA	10	True	AATAAA	-13	NA	57445576	57455064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
Isoform_93399_25	chr1	+	1279	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	213	2048	213	-2048	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTAGTGTTCTTTAAA	NA	False	NA	10	True	AATAAA	-13	NA	57445699	57455064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
Isoform_93400_6	chr1	+	1120	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	427	1993	-4	-1993	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCCTGTTTAATAT	NA	False	NA	65	True	AGTAAA	-21	NA	57445913	57455119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
Isoform_93402_5	chr1	+	3108	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	425	7	-6	-7	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACTCTTTGGGTCAT	NA	False	NA	NA	False	NA	NA	NA	57445911	57457105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
Isoform_93403_3	chr1	+	2399	14	NIC	ENSMUSG00000038305.16	novel	2315	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	16.1274509627595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTTGCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	57813893	57986123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_57813961_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
Isoform_93404_60	chr1	+	2500	14	FSM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	0	1429	0	0	multi-exon	FALSE	canonical	3	22	junction_13	12.6939392890685	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57814019	57986124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
Isoform_93406_8	chr1	+	2552	14	FSM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	-52	1429	-52	0	multi-exon	FALSE	canonical	3	22	junction_13	12.6939392890685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57813967	57986124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
Isoform_93407_42	chr1	+	2497	14	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	8.58855713199065	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57814019	57986124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
Isoform_93408_4	chr1	+	2273	13	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	16.9777223312067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTTGCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	57814035	57986123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
Isoform_93415_313	chr1	+	4894	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	45	0	45	0	multi-exon	FALSE	canonical	0	0	junction_8	80.2616813928041	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATCTATTTATTTA	5184	False	NA	15	True	ATTAAA	-19	NA	58035174	58065058	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
Isoform_93424_44	chr1	+	4316	35	FSM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	41	249	-9	-249	multi-exon	FALSE	canonical	3	19	junction_6	6.33501009795379	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTCTGTGCTGAGTC	NA	False	NA	10	True	ATTAAA	-20	NA	58152335	58239608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
Isoform_93433_2508	chr1	+	2838	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	238	800	4	-800	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	2508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTATAGATCAGTCTTT	895	False	NA	23	True	AATAAA	-18	NA	58432294	58445712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
Isoform_93434_1460	chr1	+	3637	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	240	-1	6	1	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGTGTCTGTGCTTTA	897	False	NA	14	True	NA	NA	NA	58432296	58446513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
Isoform_93436_91	chr1	+	3674	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	203	-1	-23	1	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGTGTCTGTGCTTTA	860	False	NA	14	True	NA	NA	NA	58432259	58446513	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
Isoform_93441_114	chr1	+	2873	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	203	800	-23	-800	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTATAGATCAGTCTTT	860	False	NA	23	True	AATAAA	-18	NA	58432259	58445712	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
Isoform_93480_10	chr1	+	3480	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	372	-83	-105	83	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTAGCCTGGCTTCTCC	NA	False	NA	NA	False	AATAAA	-19	NA	58484681	58502698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
Isoform_93482_103	chr1	+	2139	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	441	1189	-36	1	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGACACACTGTATT	NA	False	NA	14	True	NA	NA	NA	58484750	58501426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
Isoform_93484_214	chr1	+	1396	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	441	1932	-36	140	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTTTGTTTCTTGG	NA	False	NA	16	True	ATTAAA	-16	NA	58484750	58500683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
Isoform_93486_14	chr1	+	1725	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	112	1932	-4	140	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTTTGTTTCTTGG	NA	False	NA	16	True	ATTAAA	-16	NA	58484421	58500683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
Isoform_93495_5	chr1	+	4434	7	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	77	82	at_least_one_novel_splicesite	TRUE	canonical	2	17	junction_2	61.5485355002231	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7159230	7242965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
Isoform_93496_6	chr1	+	4233	6	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	87	83	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	49.9623858517585	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159240	7242966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7231115_7231288_7233471_7233596_7239738
Isoform_93500_106	chr1	+	4268	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	78	886	68	83	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159221	7242966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
Isoform_93502_32	chr1	+	4309	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	37	886	27	83	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159180	7242966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
Isoform_93503_13	chr1	+	5165	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	66	1	56	-1	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTTTTTGAGGTGTTC	NA	False	NA	4	True	NA	NA	NA	7159209	7243851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
Isoform_93505_7	chr1	+	5228	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	3	1	3	-1	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTTTTTGAGGTGTTC	NA	False	NA	4	True	NA	NA	NA	7159146	7243851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
Isoform_93507_13	chr1	+	4066	6	NIC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	39	82	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	57.3006108169887	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7159192	7242965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_7159441_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
Isoform_93510_24	chr1	+	3879	5	FSM	ENSMUSG00000051285.18	ENSMUST00000182114.8	770	5	35	-3144	35	83	multi-exon	FALSE	canonical	3	49	junction_1	40.8495716011808	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159188	7242966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_7159441_7217860_7217964_7231115_7231288_7233471_7233596_7239738
Isoform_93513_427	chr1	+	534	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	218	11	218	-11	multi-exon	FALSE	canonical	3	979	junction_1	90.5	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTGTAATGTGTGTCC	NA	False	NA	41	True	AATAAA	-9	NA	58625760	58635112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58625830_58630248_58630409_58634807
Isoform_93517_12	chr1	+	2062	9	FSM	ENSMUSG00000026029.15	ENSMUST00000027189.15	2585	9	34	489	34	6	multi-exon	FALSE	canonical	2	10	junction_6	4.14578098794425	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTGTTTTGCTTT	2958	False	NA	9	True	AATATA	-22	NA	58834566	58886173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58834898_58863073_58863407_58866365_58866472_58868031_58868171_58868254_58868309_58870764_58870827_58872791_58872934_58883502_58884005_58885780
Isoform_93520_150	chr1	+	2302	12	FSM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	57	601	57	-8	multi-exon	FALSE	canonical	3	56	junction_7	10.2964328252857	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAACATCTCTTTTAT	NA	False	NA	7	True	AATAAA	-9	NA	59012737	59034273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
Isoform_93522_7	chr1	+	2101	11	FSM	ENSMUSG00000026027.14	ENSMUST00000123301.8	2070	11	86	-117	86	-8	multi-exon	FALSE	canonical	1	4	junction_7	23.192455669894	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAACATCTCTTTTAT	NA	False	NA	7	True	AATAAA	-9	NA	59012766	59034273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031809_59031915_59032051_59032297_59032719_59032763_59033451
Isoform_93525_11	chr1	+	1646	9	NIC	ENSMUSG00000047361.17	novel	933	5	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	3.23795846174715	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATTTTGTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-16	NA	59658574	59675574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_59658605_59664245_59664337_59666615_59666767_59667328_59667444_59669153_59669486_59671372_59671576_59672305_59672479_59673152_59673373_59675243
Isoform_93528_26	chr1	+	2158	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	614.893580675189	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTTTTGTGATCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	59724158	59750668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731710_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
Isoform_93533_50	chr1	+	2121	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	171	junction_3	590.490628394916	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724134	59750667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
Isoform_93534_154	chr1	+	2097	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	171	junction_3	590.490628394916	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724158	59750667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
Isoform_93547_257	chr1	+	2023	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-51	7535	-13	-1	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTTTTGTGATCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	59724116	59750668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
Isoform_93548_1406	chr1	+	1981	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-9	7535	-3	-1	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTTTTGTGATCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	59724158	59750668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
Isoform_93556_31	chr1	+	2339	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	4	-1	intron_retention	FALSE	canonical	3	306	junction_3	446.071199816938	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTTTTGTGATCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	59724139	59750668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_59724386_59729644_59729722_59731495_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
Isoform_9356_8	chr10	+	177	1	Intergenic	novelGene_911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGATTAAAA	3600	False	NA	NA	False	NA	NA	NA	62436252	62436429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62436300_62436400
Isoform_93560_13	chr1	+	1866	14	FSM	ENSMUSG00000025911.15	ENSMUST00000144177.8	3239	14	138	1235	-6	-166	multi-exon	FALSE	canonical	0	0	junction_4	25.1132346823944	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTCTGTTTCATAAA	NA	False	NA	NA	False	AATAAA	-20	NA	9618310	9646960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
Isoform_93561_3	chr1	+	2068	14	FSM	ENSMUSG00000025911.15	ENSMUST00000144177.8	3239	14	117	1054	10	15	multi-exon	FALSE	canonical	0	0	junction_4	25.1132346823944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTACTGAGTATTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	9618289	9647141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
Isoform_93562_32	chr1	+	1836	13	FSM	ENSMUSG00000025911.15	ENSMUST00000027044.15	2022	13	18	168	18	-168	multi-exon	FALSE	canonical	0	0	junction_3	21.4416197045735	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATGTCTGTTTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	9618297	9646958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
Isoform_93564_10	chr1	+	1808	12	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	10	-166	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.4879650744496	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTCTGTTTCATAAA	NA	False	NA	NA	False	AATAAA	-20	NA	9618289	9646960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_9618377_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
Isoform_93565_5	chr1	+	1549	10	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	18	-166	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	26.6333124739176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTCTGTTTCATAAA	NA	False	NA	NA	False	AATAAA	-20	NA	9618297	9646960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_9618377_9623542_9623698_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
Isoform_9357_5	chr10	+	176	1	Intergenic	novelGene_912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAACAAAAAAACAAAACCA	7453	False	NA	NA	False	NA	NA	NA	62440105	62440281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62440100_62440300
Isoform_9358_20	chr10	+	172	1	Intergenic	novelGene_913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGTAGGGTAA	NA	False	NA	NA	False	NA	NA	NA	62470872	62471044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62470900_62471000
Isoform_93586_4	chr1	+	3396	12	ISM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	144	10978	144	-10978	5prime_fragment	FALSE	canonical	0	0	junction_11	3.62041959122543	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTCAACAAAAGAACCC	NA	False	NA	NA	False	NA	NA	NA	59802702	59907195	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_59803888_59852746_59852918_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494
Isoform_93587_154	chr1	+	5535	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	-3	0	-3	0	multi-exon	FALSE	canonical	3	104	junction_1	7.88177955664784	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTCTTTCTCTGTGTG	NA	False	NA	22	True	AATAAA	-15	NA	59952161	60024505	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
Isoform_9359_10	chr10	-	1311	1	FSM	ENSMUSG00000020076.8	ENSMUST00000218224.2	2681	1	-445	1815	-400	-1815	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	9875	False	NA	NA	False	NA	NA	NA	62487397	62486086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62486100_62487400
Isoform_93593_5	chr1	+	8872	55	FSM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	-5	6864	-5	-2	multi-exon	TRUE	canonical	1	1	junction_10	5.85232065632702	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGAGAGATGTGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	60219752	60370623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
Isoform_93594_220	chr1	+	2226	13	FSM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	-3	0	-3	0	multi-exon	FALSE	canonical	3	86	junction_1	9.38083151964686	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	28	True	AATAAA	-16	NA	60382478	60427219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
Isoform_93595_4	chr1	+	2059	12	FSM	ENSMUSG00000049439.14	ENSMUST00000148443.3	2056	12	-3	0	-3	0	multi-exon	FALSE	canonical	2	3	junction_2	29.4898777983562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	28	True	AATAAA	-16	NA	60382478	60427219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60382617_60391279_60391330_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
Isoform_93596_3	chr1	+	4347	10	NIC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	-49	-13	intron_retention	FALSE	canonical	3	7	junction_6	60.5764489949643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	60448728	60518664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60489229_60489413_60492762_60492922_60509824_60509999_60515898
Isoform_93597_18	chr1	+	5827	10	FSM	ENSMUSG00000026782.16	ENSMUST00000187709.7	1671	10	-158	-3998	26	-2	multi-exon	FALSE	canonical	3	29	junction_7	51.9553464495364	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAGTGTCTTGTAGAA	NA	False	NA	13	True	AATAAA	-15	NA	60448803	60520315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
Isoform_93599_3	chr1	+	5919	10	FSM	ENSMUSG00000026782.16	ENSMUST00000187709.7	1671	10	-251	-3997	-67	-3	multi-exon	FALSE	canonical	3	29	junction_7	51.9553464495364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCAGTGTCTTGTAGA	NA	False	NA	12	True	AATAAA	-14	NA	60448710	60520314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
Isoform_93602_92	chr1	+	5743	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	23	2	23	-2	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAGTGTCTTGTAGAA	NA	False	NA	13	True	AATAAA	-15	NA	60448800	60520315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_93605_8	chr1	+	4379	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	-68	1457	-68	183	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTCTCCTACAGTATT	NA	False	NA	3	True	AATAAA	-13	NA	60448709	60518860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_93606_26	chr1	+	5800	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	-33	1	-33	-1	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGTGTCTTGTAGAAT	NA	False	NA	14	True	AATAAA	-16	NA	60448744	60520316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_93607_4	chr1	+	6600	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	-48	-784	-48	784	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCAGTGTGTGTGTGTTC	NA	False	NA	3	True	AATACA	-14	NA	60448729	60521101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_93608_10	chr1	+	6492	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	61	-785	-15	785	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGTGTGTGTGTTCA	NA	False	NA	4	True	AATACA	-15	NA	60448838	60521102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_9361_4	chr10	-	168	1	Intergenic	novelGene_914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	62527939	62527771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62527800_62527900
Isoform_93613_19	chr1	+	5735	9	NNC	ENSMUSG00000026782.16	novel	5768	9	NA	NA	30	0	intron_retention	FALSE	canonical	3	27	junction_5	45.7295036054405	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTGTCTTGTAGAATC	NA	False	NA	15	True	AATAAA	-17	NA	60448807	60520317	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_93614_7	chr1	+	5852	9	NNC	ENSMUSG00000026782.16	novel	5768	9	NA	NA	-88	-1	intron_retention	TRUE	canonical	3	27	junction_5	45.7295036054405	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGTGTCTTGTAGAAT	NA	False	NA	14	True	AATAAA	-16	NA	60448689	60520316	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_93617_4	chr1	+	2090	13	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	34713	10638	34713	-10638	internal_fragment	FALSE	canonical	3	7	junction_6	4.29065522061867	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTTTTCTCTTTCCAT	6641	False	NA	NA	False	AAAAAG	-15	NA	62777573	62825502	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439
Isoform_93620_2132	chr1	+	795	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	307	837	1	-7	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	2132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACCCTTGGCTCTTC	NA	False	NA	23	True	AATAAA	-8	NA	63216290	63218808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
Isoform_93621_226	chr1	+	827	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	275	837	-29	-7	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACCCTTGGCTCTTC	NA	False	NA	23	True	AATAAA	-8	NA	63216258	63218808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
Isoform_93622_132	chr1	+	1092	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	10	837	10	-7	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACCCTTGGCTCTTC	NA	False	NA	23	True	AATAAA	-8	NA	63215993	63218808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
Isoform_93635_5	chr1	+	891	2	FSM	ENSMUSG00000086730.3	ENSMUST00000141027.2	462	2	260	-689	-135	336	multi-exon	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAACAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	63239731	63247462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63239834_63246673
Isoform_93637_6	chr1	+	1053	6	Fusion	ENSMUSG00000086730.3_ENSMUSG00000027520.17	novel	462	2	NA	NA	-135	8173	multi-exon	FALSE	canonical	3	22	junction_2	8.44748483277715	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAACTAAGTATAAA	NA	False	NA	NA	False	ACTAAA	-7	NA	63239731	63342354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_+_63239834_63246673_63246774_63317089_63317143_63319925_63320037_63334074_63334206_63341798
Isoform_93639_4	chr1	+	1101	5	NIC	ENSMUSG00000027520.17	novel	12523	6	NA	NA	-42	8173	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	13.8834433769148	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAACTAAGTATAAA	9129	False	NA	NA	False	ACTAAA	-7	NA	63312381	63342354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_63312632_63317089_63317143_63319925_63320037_63334074_63334206_63341798
Isoform_9364_3	chr10	-	177	1	Intergenic	novelGene_915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGGAATATATCTT	8527	False	NA	NA	False	NA	NA	NA	62545092	62544915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62544900_62545100
Isoform_93642_3	chr1	+	2724	24	FSM	ENSMUSG00000025964.16	ENSMUST00000182642.8	2889	24	134	31	90	-31	multi-exon	FALSE	canonical	2	25	junction_12	8.88489723439638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAGAAAAGTAAATATAC	NA	False	NA	NA	False	ATTAAA	-24	NA	63485183	63612345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045
Isoform_93644_15	chr1	+	3075	26	FSM	ENSMUSG00000025964.16	ENSMUST00000114107.3	6110	26	-330	3365	-10	-1	multi-exon	FALSE	canonical	2	8	junction_25	13.3899066464259	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGAATCCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-14	NA	63485039	63632070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63620295_63620387_63631766
Isoform_93646_25	chr1	+	3091	26	FSM	ENSMUSG00000025964.16	ENSMUST00000087374.10	6426	26	-28	3363	-24	1	multi-exon	TRUE	canonical	2	14	junction_24	11.498591218058	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAATCCTTTTTTTTCT	NA	False	NA	11	True	ATTAAA	-16	NA	63485025	63632072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63624523_63624615_63631766
Isoform_9365_195	chr11	+	176	1	Intergenic	novelGene_2333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118227864	118228040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_118227900_118228000
Isoform_93650_7	chr1	+	2932	25	FSM	ENSMUSG00000025964.16	ENSMUST00000114103.8	2655	25	-278	1	-2	-1	multi-exon	FALSE	canonical	2	7	junction_24	11.7541363877667	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGAATCCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-14	NA	63485091	63632070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63631766
Isoform_93651_6	chr1	+	2967	25	FSM	ENSMUSG00000025964.16	ENSMUST00000114103.8	2655	25	-329	17	-9	-17	multi-exon	FALSE	canonical	2	7	junction_24	11.7541363877667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAACAACAACTT	NA	False	NA	-7	True	NA	NA	NA	63485040	63632054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63631766
Isoform_93652_4	chr1	+	2955	25	NNC	ENSMUSG00000025964.16	novel	2655	25	NA	NA	-2	-2541	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_24	12.305994474239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAAGAGCAAGGAAATG	NA	False	NA	NA	False	ATTAAA	-15	NA	63485047	63618797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63618514
Isoform_93653_3	chr1	+	2245	19	NNC	ENSMUSG00000025964.16	novel	2889	24	NA	NA	0	-5977	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	13.9518572594352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCTTAATAAGTATTCAT	NA	False	NA	NA	False	ATTAAA	-20	NA	63485049	63600092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63599895
Isoform_93655_906	chr1	+	2281	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	16	2189	-11	1	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGGATCAGCTGGCTGA	NA	False	NA	6	True	AATAAA	-17	NA	63769788	63791625	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
Isoform_9366_4	chr10	+	176	1	Intergenic	novelGene_917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGTTCAATGTT	NA	False	NA	NA	False	NA	NA	NA	62579432	62579608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62579400_62579600
Isoform_93666_13	chr1	+	6820	9	FSM	ENSMUSG00000025958.15	ENSMUST00000190348.2	1260	9	-67	-5493	-5	-1578	multi-exon	FALSE	canonical	3	25	junction_4	27.9773904251272	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	9	True	CATAAA	-18	NA	64571985	64642129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
Isoform_93667_3	chr1	+	6246	9	FSM	ENSMUSG00000025958.15	ENSMUST00000190348.2	1260	9	-114	-4872	-17	1092	multi-exon	FALSE	canonical	3	25	junction_4	27.9773904251272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGTGTGTAGATT	NA	False	NA	NA	False	AATAAA	-36	NA	64571938	64641508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
Isoform_93669_16	chr1	+	3469	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	-546	0	-23	0	multi-exon	FALSE	canonical	3	63	junction_5	18.3632752128592	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64729957	64764799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
Isoform_9367_3	chr10	+	3380	2	NNC	ENSMUSG00000040021.14	novel	4186	7	NA	NA	21813	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGACTGGAAAGCTGAA	NA	False	NA	22	True	AATAAA	-25	NA	7588823	7592223	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_+_7589029_7589048
Isoform_93670_85	chr1	+	3343	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	-420	0	103	0	multi-exon	FALSE	canonical	3	63	junction_5	18.3632752128592	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64730083	64764799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
Isoform_93677_3	chr1	+	1377	10	NNC	ENSMUSG00000070871.11	novel	2923	10	NA	NA	100	-1363	intron_retention	FALSE	canonical	2	5	junction_9	34.6185563599126	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTGGTATCTTATATA	NA	False	NA	NA	False	NA	NA	NA	64730080	64761742	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64761593
Isoform_93678_9	chr1	+	3242	9	NIC	ENSMUSG00000070871.11	novel	2923	10	NA	NA	103	0	intron_retention	FALSE	canonical	3	8	junction_3	34.7589916424513	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64730083	64764799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_64730560_64740127_64740203_64741504_64741540_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
Isoform_93680_4	chr1	+	4783	7	FSM	ENSMUSG00000025949.17	ENSMUST00000185317.7	1044	7	-30	-3709	-30	16	multi-exon	FALSE	canonical	3	56	junction_1	20.9257948209593	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATAAATGTTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	65225811	65248574	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747
Isoform_93684_3	chr1	+	1567	7	ISM	ENSMUSG00000025949.17	ENSMUST00000188799.7	4083	11	11	19922	0	21	5prime_fragment	FALSE	canonical	3	73	junction_1	15.5536705207056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGATTTCAGCCCCGAG	NA	False	NA	NA	False	ATTAAA	-19	NA	65225862	65245354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747
Isoform_93687_4	chr1	+	2056	8	ISM	ENSMUSG00000025949.17	ENSMUST00000188799.7	4083	11	-52	9241	-42	614	5prime_fragment	FALSE	canonical	3	68	junction_7	18.3492200801838	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAGTCAGGAAATTCC	NA	False	NA	NA	False	AATAAA	-20	NA	65225799	65256035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092
Isoform_93688_22	chr1	+	9485	42	FSM	ENSMUSG00000025949.17	ENSMUST00000097707.5	6641	42	-55	-2789	1	-1894	multi-exon	FALSE	canonical	3	51	junction_11	15.9367802178507	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTTCAGATCTCTTTG	NA	False	NA	26	True	AATAAA	-36	NA	65225853	65315960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
Isoform_93689_4	chr1	+	9330	41	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	0	-1893	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	18.0099972237644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTCAGATCTCTTTGA	NA	False	NA	27	True	AATAAA	-37	NA	65225841	65315961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
Isoform_9369_13	chr10	-	178	1	ISM	ENSMUSG00000020074.8	ENSMUST00000217940.2	3178	9	20710	1574	416	-1403	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACCAAAACT	9075	False	NA	NA	False	NA	NA	NA	62607339	62607161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62607200_62607300
Isoform_93690_4	chr1	+	2865	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	-147	988	-147	2	multi-exon	TRUE	canonical	3	15	junction_1	31.0518090254014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGTGAATGTGTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	9868184	9970080	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_93692_31	chr1	+	3632	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	49	-1	0	1	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGGACTATTTCATGC	9863	False	NA	NA	False	ATTAAA	-15	NA	9918545	9971069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_93693_15	chr1	+	2684	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	3	993	3	-3	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGTTGGTGTGAATGT	9817	False	NA	NA	False	AATAAA	-8	NA	9918499	9970075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_93696_52	chr1	+	2653	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	50	977	1	13	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTCACCTACACATT	9864	False	NA	NA	False	AATAAA	-24	NA	9918546	9970091	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_9370_11	chr10	+	176	1	Intergenic	novelGene_918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	5664	False	NA	NA	False	NA	NA	NA	62608044	62608220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62608000_62608200
Isoform_93705_5	chr1	+	3387	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	1	292	1	-219	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTAGATTTTTGTTGTT	9815	False	NA	NA	False	ATTAAA	-41	NA	9918497	9970776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_93707_3	chr1	+	2547	16	NIC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_13	31.8631797255425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGGTGTGAATGTGTG	9861	False	NA	NA	False	AATAAA	-11	NA	9918543	9970078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9959094_9959251_9961585_9961676_9968944
Isoform_9371_75	chr10	-	177	1	FSM	ENSMUSG00000112806.2	ENSMUST00000218355.2	1431	1	946	308	946	-308	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	62618020	62617843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_62617800_62618000
Isoform_93711_20	chr1	+	2742	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	-4	-10	-4	10	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGTGTCACCTACAC	9935	False	NA	NA	False	AATAAA	-21	NA	9918617	9970088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_93712_10	chr1	+	3723	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	-3	-992	-3	0	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGACTATTTCATGCT	9936	False	NA	NA	False	ATTAAA	-16	NA	9918618	9971070	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_93720_7	chr1	+	5544	15	FSM	ENSMUSG00000015222.19	ENSMUST00000114017.8	4981	15	-11	-552	-11	-1	multi-exon	FALSE	canonical	2	3	junction_1	6.25846365707581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTACAAGTTTCAGATTT	NA	False	NA	13	True	AATAAA	-14	NA	66214460	66481739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_66214655_66232277_66232341_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
Isoform_93721_16	chr1	+	5485	14	NIC	ENSMUSG00000015222.19	novel	4981	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	4.07909956417318	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAAGTTTCAGATTTT	NA	False	NA	14	True	AATAAA	-15	NA	66214457	66481740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_66214655_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
Isoform_93722_9	chr1	+	2379	7	FSM	ENSMUSG00000026005.16	ENSMUST00000113995.2	2713	7	38	296	-38	-296	multi-exon	FALSE	canonical	3	20	junction_2	373.751439982362	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAAGTTTGTAAGTATT	NA	False	NA	14	True	NA	NA	NA	66740027	66758668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_66740177_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
Isoform_93724_33	chr1	+	2347	6	NIC	ENSMUSG00000026005.16	novel	2713	7	NA	NA	-38	-296	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	305.506530208439	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAAGTTTGTAAGTATT	NA	False	NA	14	True	NA	NA	NA	66740027	66758668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_66740177_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
Isoform_93727_372	chr1	+	2357	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	38	297	-38	-297	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTTTGTAAGTAT	NA	False	NA	13	True	NA	NA	NA	66740027	66758667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
Isoform_9373_4	chr10	+	237	1	Intergenic	novelGene_919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGCACTTAGGAGGCA	NA	False	NA	NA	False	NA	NA	NA	62634747	62634984	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62634700_62635000
Isoform_93736_245	chr1	+	2396	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-1	297	-1	-297	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTTTGTAAGTAT	NA	False	NA	13	True	NA	NA	NA	66739988	66758667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
Isoform_93738_13	chr1	+	2695	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-1	-2	-1	2	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGAATTCTTGATCT	NA	False	NA	7	True	ATTAAA	-14	NA	66739988	66758966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
Isoform_9374_4	chr10	-	171	1	Intergenic	novelGene_920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCACAGTGAGCAGAAGT	NA	False	NA	NA	False	NA	NA	NA	62637815	62637644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62637600_62637800
Isoform_93751_4	chr1	+	1373	9	NNC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-3	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.73315853153538	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9978889	9991457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_9978898_9982145_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986782_9986880_9989244_9989371_9990659_9990898_9991052
Isoform_93752_13	chr1	+	2514	15	FSM	ENSMUSG00000046101.17	ENSMUST00000171802.8	2553	15	1	38	1	-38	multi-exon	FALSE	canonical	2	3	junction_12	9.43857694220254	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAAAGGAAAAATT	NA	False	NA	NA	False	NA	NA	NA	9978863	10011141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602
Isoform_93753_5	chr1	+	2462	14	NIC	ENSMUSG00000046101.17	novel	2553	15	NA	NA	-4	-35	intron_retention	TRUE	canonical	1	3	junction_3	10.2131137420325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGAAAAATTACC	NA	False	NA	NA	False	NA	NA	NA	9978858	10011144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_9978916_9981899_9982038_9982134_9982266_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602
Isoform_93756_2581	chr1	+	2589	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	29	227	0	-227	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	2581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	71596337	71618563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
Isoform_93757_84	chr1	+	2802	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	43	0	14	0	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTGCTGGCTGA	NA	False	NA	15	True	AATAAA	-15	NA	71596351	71618790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
Isoform_93758_107	chr1	+	2617	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	0	228	0	-228	multi-exon	TRUE	canonical	3	576	junction_4	38.3577313661217	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTGTGGTTACTTTT	NA	False	NA	13	True	AATAAA	-13	NA	71596308	71618562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
Isoform_93788_712	chr1	+	2465	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	85	-1	85	1	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	407	False	NA	23	True	TATAAA	-29	NA	72346670	72434112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
Isoform_93790_227	chr1	+	2548	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	0	1	0	-1	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGTGTGAAGTCTC	322	False	NA	21	True	TATAAA	-27	NA	72346585	72434110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
Isoform_9380_4	chr10	-	1102	3	NNC	ENSMUSG00000047146.18	novel	13986	11	NA	NA	8418	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTAGTCTATTTTTTTC	9314	False	NA	1	True	AATAAA	-21	NA	62641900	62640348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr10_-_62640559_62640616_62641229_62641620
Isoform_9381_17	chr10	-	1768	1	ISM	ENSMUSG00000047146.18	ENSMUST00000050826.14	13986	11	73676	1	8201	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTAGTCTATTTTTTT	9097	False	NA	0	True	AATAAA	-20	NA	62642117	62640349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62640300_62642100
Isoform_93811_309	chr1	+	3034	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	22	3	22	-3	multi-exon	FALSE	canonical	3	73	junction_6	11.1563813017483	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTATTCCGTTTGT	NA	False	NA	6	True	AATAAA	-13	NA	72622431	72672290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
Isoform_93814_4	chr1	+	3027	17	FSM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	-36	3	-36	-3	multi-exon	FALSE	canonical	2	6	junction_1	25.2319706671913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTATTCCGTTTGT	NA	False	NA	6	True	AATAAA	-13	NA	72622737	72672290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72622897_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
Isoform_93817_5253	chr1	+	363	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	195	0	1	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	5253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTTTTTTTTGCCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	72750448	72752777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
Isoform_93818_163	chr1	+	557	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	1	0	-1	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTACATAGCTTGGTT	NA	False	NA	18	True	AATAAA	-16	NA	72750448	72752971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
Isoform_93819_209	chr1	+	410	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	-47	195	-47	1	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTTTTTTTTGCCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	72750401	72752777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
Isoform_9382_14	chr10	-	2084	1	ISM	ENSMUSG00000047146.18	ENSMUST00000050826.14	13986	11	73360	1	7885	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTAGTCTATTTTTTT	8781	False	NA	0	True	AATAAA	-20	NA	62642433	62640349	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62640300_62642400
Isoform_93820_396	chr1	+	418	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	140	0	56	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTATTTTCGAAAGATG	NA	False	NA	33	True	ATTAAA	-20	NA	72750448	72752832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
Isoform_93829_10502	chr1	+	1308	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	-11	10	-11	-3	multi-exon	FALSE	canonical	3	3391	junction_2	148.912353043288	10502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAAGTGTGTGTCT	1279	False	NA	8	True	ATTAAA	-8	NA	72863650	72891623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
Isoform_93830_110	chr1	+	1369	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	-72	10	-72	-3	multi-exon	FALSE	canonical	3	3391	junction_2	148.912353043288	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAAGTGTGTGTCT	1218	False	NA	8	True	ATTAAA	-8	NA	72863589	72891623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
Isoform_93849_935	chr1	+	1385	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	53	1	0	-1	multi-exon	FALSE	canonical	3	1389	junction_1	306.215936881149	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7881	False	NA	13	True	AATAAA	-18	NA	74275708	74307367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
Isoform_93851_480	chr1	+	1421	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	17	1	-3	-1	multi-exon	TRUE	canonical	3	1389	junction_1	306.215936881149	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7845	False	NA	13	True	AATAAA	-18	NA	74275672	74307367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
Isoform_93857_417	chr1	+	1592	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	33	-221	0	-1	multi-exon	FALSE	canonical	3	1867	junction_3	197.32307280632	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7881	False	NA	13	True	AATAAA	-18	NA	74275708	74307367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
Isoform_93867_916	chr1	+	610	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	128	2	3	-2	multi-exon	FALSE	canonical	3	1381	junction_1	89	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGGCCAGGTTGAATTT	NA	False	NA	4	True	AATAAA	-22	NA	74324216	74326611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74324297_74325000_74325170_74326250
Isoform_93868_12	chr1	+	683	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	53	4	53	-4	multi-exon	FALSE	canonical	3	1381	junction_1	89	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGAGGCCAGGTTGAAT	NA	False	NA	2	True	AATAAA	-20	NA	74324141	74326609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74324297_74325000_74325170_74326250
Isoform_93872_115	chr1	+	2926	10	FSM	ENSMUSG00000026179.15	ENSMUST00000027370.13	2937	10	12	-1	2	1	multi-exon	FALSE	canonical	3	54	junction_2	408.826988068106	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGGTCTGAGCTCTCAA	NA	False	NA	4	True	NA	NA	NA	74324215	74392844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74324297_74325000_74325170_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
Isoform_93875_111	chr1	+	2845	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	13	1	13	1	multi-exon	FALSE	canonical	3	63	junction_1	11.428445869846	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGGTCTGAGCTCTCAA	9376	False	NA	4	True	NA	NA	NA	74371781	74392844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
Isoform_93876_6	chr1	+	2295	15	FSM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	20	0	-2	0	multi-exon	FALSE	canonical	2	3	junction_1	14.5525087254426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	4991	False	NA	NA	False	NA	NA	NA	74414381	74425221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74414481_74414876_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_93878_3	chr1	+	2309	14	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	393	9	24	1	3prime_fragment	FALSE	canonical	2	4	junction_8	14.2151681635203	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTTAAAGAGT	5364	False	NA	NA	False	NA	NA	NA	74414754	74425212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_93880_3	chr1	+	2244	13	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	1397	11	-57	0	3prime_fragment	FALSE	canonical	2	4	junction_7	13.8774397254441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAATCTTAAAGA	6368	False	NA	NA	False	NA	NA	NA	74415758	74425210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_93881_10	chr1	+	2186	13	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	1457	9	3	1	3prime_fragment	FALSE	canonical	2	4	junction_7	13.8774397254441	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTTAAAGAGT	6428	False	NA	NA	False	NA	NA	NA	74415818	74425212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_93882_19	chr1	+	1134	5	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	8447	9	50	1	3prime_fragment	FALSE	canonical	3	29	junction_1	7.87400787401181	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTTAAAGAGT	4371	False	NA	NA	False	NA	NA	NA	74422808	74425212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_93884_28	chr1	+	2417	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	167	292	-119	-289	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCGCCTCTGTGGTTTTT	3477	False	NA	13	True	ACTAAA	-22	NA	74430834	74436152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_93886_18	chr1	+	2678	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	-95	293	-95	-290	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCCGCCTCTGTGGTTTT	3215	False	NA	12	True	ACTAAA	-21	NA	74430572	74436151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_93887_22	chr1	+	2719	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	150	7	-136	-4	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACGGTGCCCCCACC	3460	False	NA	NA	False	AATAAA	-10	NA	74430817	74436437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_93891_11	chr1	+	2891	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	-23	8	-23	-5	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACGGTGCCCCCAC	3287	False	NA	NA	False	AATAAA	-9	NA	74430644	74436436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_93892_5	chr1	+	2952	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	-83	7	-83	-4	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACGGTGCCCCCACC	3227	False	NA	NA	False	AATAAA	-10	NA	74430584	74436437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_93895_5	chr1	+	2553	7	NIC	ENSMUSG00000026176.14	novel	393	4	NA	NA	-52	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	7.90393713425292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACGGTGCCCCCACC	3911	False	NA	NA	False	AATAAA	-10	NA	74431268	74436437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_74431409_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_93896_4	chr1	+	2072	3	ISM	ENSMUSG00000026176.14	ENSMUST00000141175.2	2957	6	2589	290	2222	-290	3prime_fragment	FALSE	canonical	3	20	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCCGCCTCTGTGGTTTT	1184	False	NA	12	True	ACTAAA	-21	NA	74433542	74436151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_74433892_74433995_74434182_74434614
Isoform_93901_46	chr1	+	4352	30	FSM	ENSMUSG00000056763.17	ENSMUST00000071087.12	4355	30	2	1	2	-1	multi-exon	FALSE	canonical	2	35	junction_1	28.6386316840114	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCAGTGTCGGTTTCTT	NA	False	NA	3	True	AATAAA	-16	NA	10108443	10206992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
Isoform_93903_4	chr1	+	2645	16	ISM	ENSMUSG00000026175.13	ENSMUST00000027366.13	3124	20	10208	45	531	-45	3prime_fragment	FALSE	canonical	0	0	junction_5	2.74388208363422	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGGCTTTAATGTC	NA	False	NA	NA	False	AATAAA	-17	NA	74458742	74474673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_74458837_74458953_74459065_74460411_74460615_74460719_74460799_74460937_74461037_74462085_74462240_74462833_74462935_74463021_74463160_74464695_74464855_74465710_74465891_74466398_74466545_74466637_74466783_74467225_74467415_74469775_74469845_74471449_74471591_74474036
Isoform_93906_4	chr1	+	2156	7	FSM	ENSMUSG00000056763.17	ENSMUST00000119714.8	1268	7	-13	-875	-1	1	multi-exon	FALSE	canonical	2	91	junction_2	18.4157239577729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGATCTTGATGGTG	NA	False	NA	NA	False	ATTAAA	-35	NA	10109996	10138202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
Isoform_93907_4	chr1	+	3395	7	FSM	ENSMUSG00000056763.17	ENSMUST00000119714.8	1268	7	-18	-2109	0	878	multi-exon	FALSE	canonical	2	91	junction_2	18.4157239577729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTGGTGTTTGCTTCTC	NA	False	NA	NA	False	GATAAA	-23	NA	10109991	10139436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
Isoform_93909_123	chr1	+	4333	30	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	91	junction_2	22.942776355976	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCAGTGTCGGTTTCTT	NA	False	NA	3	True	AATAAA	-16	NA	10109997	10206992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
Isoform_93911_27	chr1	+	3025	8	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	351.989331934816	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	856	False	NA	38	True	AATAAA	-23	NA	74545212	74570001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_74545374_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
Isoform_93912_2150	chr1	+	2985	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	278	5	276	-5	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	2150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTGTTTT	1138	False	NA	33	True	AATAAA	-18	NA	74545494	74569996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
Isoform_93913_246	chr1	+	3271	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	-4	1	-4	-1	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTGTTTTTAAA	856	False	NA	37	True	AATAAA	-22	NA	74545212	74570000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
Isoform_93925_3	chr1	+	2162	7	NNC	ENSMUSG00000056763.17	novel	2162	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.6371225150717	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGATCTTGATGGTG	NA	False	NA	NA	False	ATTAAA	-35	NA	10109997	10138202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_10110113_10115300_10115409_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
Isoform_93926_43	chr1	+	4340	30	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	28	junction_1	29.4810041825238	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10109997	10206991	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
Isoform_93933_67	chr1	+	1492	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	74	-78	-11	13	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCTACATCTACAAATGA	1205	False	NA	26	True	AATAAA	-27	NA	74627521	74631361	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
Isoform_93936_14	chr1	+	1544	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	7	-63	-4	-2	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGGTACCTACAAGATC	1138	False	NA	11	True	AATAAA	-12	NA	74627454	74631346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
Isoform_93937_20	chr1	+	1453	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	32	3	21	-3	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCAGGCTTGTGCCTTTC	1163	False	NA	1	True	CATAAA	-13	NA	74627479	74631280	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
Isoform_93938_5	chr1	+	1836	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	-28	-320	-28	1	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCTGCCTTCTGAG	1103	False	NA	NA	False	NA	NA	NA	74627419	74631603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
Isoform_93939_4	chr1	+	1506	8	FSM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	63	321	-11	-2	multi-exon	FALSE	canonical	3	21	junction_1	42.4562199476696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCAGGCTTGTGCCTTTCC	1205	False	NA	2	True	CATAAA	-14	NA	74627521	74631281	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74627647_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
Isoform_9394_14	chr10	-	3644	1	ISM	ENSMUSG00000047146.18	ENSMUST00000050826.14	13986	11	71801	0	6326	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTAGTCTATTTTTTTC	7222	False	NA	1	True	AATAAA	-21	NA	62643992	62640348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62640300_62644000
Isoform_93944_10	chr1	+	2701	8	ISM	ENSMUSG00000033276.19	ENSMUST00000123154.2	3016	11	1390	7	1390	-4	3prime_fragment	FALSE	canonical	2	5	junction_2	4.82341229032404	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGATGAGTGTGATT	749	False	NA	NA	False	ATTAAA	-11	NA	74667013	74676046	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_74667141_74667300_74667412_74670744_74670820_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
Isoform_93945_3	chr1	+	4384	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	-37	5672	-37	81	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTTGTTCTGTAAATGA	NA	False	NA	91	True	AAAACA	-15	NA	74700866	74737217	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
Isoform_93946_104	chr1	+	4267	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	-5	5757	-5	-4	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCCATGTGTGAT	NA	False	NA	6	True	TATAAA	-18	NA	74700898	74737132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
Isoform_93947_11	chr1	+	4364	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	-103	5758	-103	-5	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700800	74737131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
Isoform_93949_41	chr1	+	8113	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	2	1904	2	-6	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTCAGTGTTGGGA	NA	False	NA	23	True	NA	NA	NA	74700905	74740985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
Isoform_93955_3	chr1	+	6665	20	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	33.0931699106756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCAGTGTTGGGAT	NA	False	NA	24	True	NA	NA	NA	74700898	74740986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_74701049_74712002_74712170_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
Isoform_93958_3	chr1	+	1141	3	ISM	ENSMUSG00000033227.8	ENSMUST00000006716.8	2071	4	10365	444	-182	276	3prime_fragment	FALSE	canonical	1	2	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATTCCTCAGAATT	4345	False	NA	NA	False	AATAAA	-23	NA	74821415	74824037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_74821482_74821718_74822054_74823297
Isoform_93960_6	chr1	+	2540	9	NIC	ENSMUSG00000049339.17	novel	2438	10	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_7	34.3647712054074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGTCTGCCTGCT	NA	False	NA	11	True	AATAAA	-18	NA	75119443	75124553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121995_75122323_75122460_75123073
Isoform_93961_124	chr1	+	2618	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	-62	5	-54	1	multi-exon	FALSE	canonical	3	93	junction_6	8.45576726264388	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTGTCTGCCTGC	NA	False	NA	10	True	AATAAA	-17	NA	75119367	75124552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
Isoform_93962_307	chr1	+	2559	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	-3	5	-3	1	multi-exon	FALSE	canonical	3	93	junction_6	8.45576726264388	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTGTCTGCCTGC	NA	False	NA	10	True	AATAAA	-17	NA	75119426	75124552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
Isoform_93964_7	chr1	+	2496	10	FSM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	-60	2	-44	0	multi-exon	FALSE	canonical	3	9	junction_9	31.2054126359159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75119377	75124551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073_75123364_75123474
Isoform_93966_5	chr1	+	2520	9	FSM	ENSMUSG00000049339.17	ENSMUST00000188873.7	2477	9	-44	1	-44	1	multi-exon	FALSE	canonical	0	0	junction_3	35.7840746701658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTGTCTGCCTGC	NA	False	NA	10	True	AATAAA	-17	NA	75119377	75124552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75121035_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
Isoform_93968_130	chr1	+	1175	10	FSM	ENSMUSG00000026197.13	ENSMUST00000160439.8	1206	10	25	6	5	-2	multi-exon	FALSE	canonical	3	87	junction_1	30.0361921605614	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGAGTGCTGTTTC	2057	False	NA	10	True	AGTAAA	-16	NA	75145314	75148267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
Isoform_93969_48	chr1	+	1077	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	47.0130005660373	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGAGTGCTGTTTCTTT	2057	False	NA	13	True	AGTAAA	-19	NA	75145314	75148270	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
Isoform_93970_56	chr1	+	1171	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	43.344727846634	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2057	False	NA	9	True	AGTAAA	-15	NA	75145314	75148266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75145352_75145477_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
Isoform_93971_14	chr1	+	1077	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	55.5417760689095	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGAGTGCTGTTTC	2051	False	NA	10	True	AGTAAA	-16	NA	75145308	75148267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75145352_75145477_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
Isoform_93972_14	chr1	+	1237	9	FSM	ENSMUSG00000026197.13	ENSMUST00000027394.12	1316	9	77	2	31	-2	multi-exon	FALSE	canonical	3	127	junction_8	17.9304210770411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGAGTGCTGTTTC	2118	False	NA	10	True	AGTAAA	-16	NA	75145375	75148267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
Isoform_93976_78	chr1	+	2717	13	FSM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	19	3	-13	-3	multi-exon	FALSE	canonical	2	42	junction_4	25.5582124222768	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGTGTGTACTTACA	63	False	NA	16	True	AATAAA	-12	NA	75168822	75176028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
Isoform_93977_80	chr1	+	2681	13	FSM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	55	3	23	-3	multi-exon	FALSE	canonical	2	42	junction_4	25.5582124222768	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGTGTGTACTTACA	99	False	NA	16	True	AATAAA	-12	NA	75168858	75176028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
Isoform_93980_11	chr1	+	3352	10	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	90	junction_5	16.0100277218474	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGTGTGTACTTACA	63	False	NA	16	True	AATAAA	-12	NA	75168822	75176028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
Isoform_93982_3	chr1	+	3491	9	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	12	-3	intron_retention	TRUE	canonical	3	90	junction_4	16.3854928213954	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGTGTGTACTTACA	56	False	NA	16	True	AATAAA	-12	NA	75168815	75176028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
Isoform_93986_9	chr1	+	671	3	FSM	ENSMUSG00000026201.13	ENSMUST00000123825.8	636	3	-32	-3	-4	2	multi-exon	FALSE	canonical	3	65	junction_1	98.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTGGTTTGGCCTTTTG	NA	False	NA	NA	False	CATAAA	-16	NA	75187485	75188881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75187669_75187883_75188059_75188568
Isoform_93987_53	chr1	+	1457	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	57.8389742195996	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187508	75190886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
Isoform_93989_5	chr1	+	1606	7	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	65	junction_1	62.3905708687886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187485	75190886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189873_75190219_75190342_75190457
Isoform_93995_7	chr1	+	698	3	FSM	ENSMUSG00000026201.13	ENSMUST00000144355.8	691	3	-5	-2	-3	2	multi-exon	FALSE	canonical	3	176	junction_1	43	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTGGTTTGGCCTTTTG	NA	False	NA	NA	False	CATAAA	-16	NA	75187486	75188881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75187697_75187883_75188059_75188568
Isoform_93996_259	chr1	+	1492	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	20	1364	10	0	multi-exon	FALSE	canonical	3	167	junction_4	30.7265756142723	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187501	75190886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
Isoform_93999_10	chr1	+	1634	7	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	167	junction_4	31.580584752872	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187485	75190886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189873_75190219_75190342_75190457
Isoform_94_111	ERCC-00079	+	626	1	FSM	ERCC-00079A	DQ883652	628	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00079_+_0_600
Isoform_94000_24	chr1	+	1965	6	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	167	junction_4	34.5913283931103	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187501	75190886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75190342_75190457
Isoform_94002_6	chr1	+	1769	6	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	10	-1	intron_retention	FALSE	canonical	3	176	junction_1	28.1666469427939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTTTAGGTCAATGTG	NA	False	NA	8	True	AATAAA	-16	NA	75187501	75190885	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189873_75190219_75190342_75190457
Isoform_94003_21	chr1	+	2110	5	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	176	junction_1	31.068472765812	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187508	75190886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75190342_75190457
Isoform_94005_5	chr1	+	2564	4	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	176	junction_1	35.311313893551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187509	75190886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75187697_75187883_75188059_75188568_75190342_75190457
Isoform_94006_13	chr1	+	1598	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	72.9262977118624	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187501	75190886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75187803_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
Isoform_94008_3	chr1	+	1861	10	FSM	ENSMUSG00000026203.17	ENSMUST00000188346.7	1823	10	-39	1	24	-1	multi-exon	FALSE	canonical	1	4	junction_1	13.4669233565562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGTGGCCTGTGTTCCT	2202	False	NA	5	True	AATAAA	-15	NA	75213073	75222335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75213182_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
Isoform_94009_6	chr1	+	3029	9	FSM	ENSMUSG00000026203.17	ENSMUST00000188931.7	3066	9	41	-4	-18	0	multi-exon	FALSE	canonical	3	35	junction_1	4.89738450603993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGGCCTGTGTTCCTC	2219	False	NA	6	True	AATAAA	-16	NA	75213090	75222336	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101
Isoform_9401_12	chr10	-	4664	1	ISM	ENSMUSG00000047146.18	ENSMUST00000050826.14	13986	11	70781	0	5306	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTAGTCTATTTTTTTC	6202	False	NA	1	True	AATAAA	-21	NA	62645012	62640348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62640300_62645000
Isoform_94011_16	chr1	+	1884	10	FSM	ENSMUSG00000026203.17	ENSMUST00000188290.7	1855	10	-28	-1	-6	-1	multi-exon	FALSE	canonical	3	30	junction_9	6.24400947476761	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGTGGCCTGTGTTCCT	2231	False	NA	5	True	AATAAA	-15	NA	75213102	75222335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
Isoform_94012_4	chr1	+	1918	11	NNC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	13.7873130087048	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGTGGCCTGTGTTCCT	2225	False	NA	5	True	AATAAA	-15	NA	75213096	75222335	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221206_75221235_75221437
Isoform_94015_40	chr1	+	1643	8	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	1693	857	-8	-857	3prime_fragment	FALSE	canonical	3	24	junction_7	3.01695886884898	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGTCATCTTGACTG	NA	False	NA	10	True	AATAAA	-21	NA	75338665	75344366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
Isoform_94017_7	chr1	+	1695	14	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	6	2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	88.7478310427522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTTGGACTCCTACTTG	NA	False	NA	15	True	AATAAA	-19	NA	75412617	75419820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75412656_75412758_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_94018_34	chr1	+	1658	14	NNC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.7478310427522	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412619	75419817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_75412656_75412790_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_94020_173	chr1	+	1494	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	46	-1	-6	1	multi-exon	FALSE	canonical	3	122	junction_1	48.5514475124641	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	14	True	AATAAA	-18	NA	75412619	75419819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_94022_13	chr1	+	1498	13	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	77.4526288916149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	14	True	AATAAA	-18	NA	75412609	75419819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75412656_75413427_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_94023_4	chr1	+	1663	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	3	0	intron_retention	FALSE	canonical	2	5	junction_1	78.2403703694937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412630	75419817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75412838_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_94024_66	chr1	+	1795	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	1	intron_retention	FALSE	canonical	3	82	junction_1	58.385869199852	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	14	True	AATAAA	-18	NA	75412619	75419819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_94026_19	chr1	+	1787	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	0	intron_retention	FALSE	canonical	3	14	junction_1	75.8797934601535	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412619	75419817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75412957_75413427_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_94028_36	chr1	+	4048	25	FSM	ENSMUSG00000026213.16	ENSMUST00000027414.16	4458	25	10	400	10	0	multi-exon	FALSE	canonical	3	17	junction_1	11.130538571376	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2750	False	NA	18	True	AATAAA	-17	NA	75498182	75513579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
Isoform_94030_3	chr1	+	3955	24	NIC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	14.9869508457249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2758	False	NA	18	True	AATAAA	-17	NA	75498190	75513579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
Isoform_94031_5	chr1	+	4162	26	NNC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_5	15.72768260107	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2752	False	NA	18	True	AATAAA	-17	NA	75498184	75513579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502283_75502400_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
Isoform_94033_41	chr1	+	4122	24	FSM	ENSMUSG00000026213.16	ENSMUST00000113553.2	4153	24	34	-3	34	0	multi-exon	FALSE	canonical	3	37	junction_10	9.28136128468159	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2797	False	NA	18	True	AATAAA	-17	NA	75498229	75513579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
Isoform_94036_13	chr1	+	4026	5	FSM	ENSMUSG00000032908.10	ENSMUST00000036172.10	4002	5	-25	1	-25	-1	multi-exon	FALSE	canonical	2	4	junction_1	2.12132034355964	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTTTCTGTGGATT	NA	False	NA	NA	False	AATAAA	-43	NA	78286956	78396925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_78287140_78336707_78336867_78367111_78367292_78369995_78370086_78393511
Isoform_94037_39	chr1	+	3635	3	FSM	ENSMUSG00000079470.9	ENSMUST00000053760.12	7393	3	-153	3911	-153	17	multi-exon	FALSE	canonical	2	10	junction_2	87	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCTTAAGAGAGCTG	NA	False	NA	16	True	NA	NA	NA	78635601	78645318	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_78635821_78640857_78640998_78642042
Isoform_94045_277	chr1	+	3129	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	60	761	2	15	multi-exon	FALSE	canonical	3	149	junction_2	98.3136477470617	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAATATATGCCTGACACT	NA	False	NA	18	True	AATAAA	-29	NA	78635601	78684699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
Isoform_94046_31	chr1	+	3892	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	60	-2	2	2	multi-exon	FALSE	canonical	3	149	junction_2	98.3136477470617	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTCAGAGTCTTGTAT	NA	False	NA	9	True	AATAAA	-21	NA	78635601	78685462	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
Isoform_9405_9	chr10	-	5684	1	ISM	ENSMUSG00000047146.18	ENSMUST00000050826.14	13986	11	69761	0	4286	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTAGTCTATTTTTTTC	5182	False	NA	1	True	AATAAA	-21	NA	62646032	62640348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62640300_62646000
Isoform_94058_525	chr1	+	2985	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	2	-11	2	11	multi-exon	TRUE	canonical	3	358	junction_1	36.8929090028677	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCGAATATATGCCTGA	NA	False	NA	14	True	AATAAA	-25	NA	78635601	78684695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
Isoform_94062_52	chr1	+	3747	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	2	-773	2	-3	multi-exon	FALSE	canonical	3	358	junction_1	36.8929090028677	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGCCTCTTCAGAGTCT	NA	False	NA	4	True	AATAAA	-16	NA	78635601	78685457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
Isoform_9408_9	chr10	-	6837	1	ISM	ENSMUSG00000047146.18	ENSMUST00000050826.14	13986	11	68601	7	3126	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCACCTGGTAGTCTAT	4022	False	NA	-6	True	AATAAA	-14	NA	62647192	62640355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62640400_62647200
Isoform_94083_474	chr1	+	1319	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	107	-2	9	2	multi-exon	FALSE	canonical	3	315	junction_2	2.44948974278318	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTCCTTTCTTTATTG	NA	False	NA	15	True	AATAAA	-17	NA	79753841	79759164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
Isoform_94088_602	chr1	+	3486	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	149	1	-41	-1	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTGTTGCTCGAGTC	NA	False	NA	13	True	AATAAA	-19	NA	82294321	82423086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
Isoform_94091_37	chr1	+	3514	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	119	3	-71	-3	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAGTGTGTTGCTCGAG	NA	False	NA	11	True	AATAAA	-17	NA	82294291	82423084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
Isoform_94109_7	chr1	+	1865	9	NIC	ENSMUSG00000026150.15	novel	1894	9	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	196.540350500858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702640	82730109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
Isoform_94111_55	chr1	+	1708	8	FSM	ENSMUSG00000026150.15	ENSMUST00000073025.12	1706	8	-1	-1	0	1	multi-exon	FALSE	canonical	3	146	junction_5	154.121870675152	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702638	82730109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82724803_82724864_82728240_82728326_82729305
Isoform_94113_67	chr1	+	1646	7	NIC	ENSMUSG00000026150.15	novel	1706	8	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	164	junction_4	124.696520489636	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702640	82730109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82728240_82728326_82729305
Isoform_94117_36	chr1	+	1864	9	FSM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	28	2	0	1	multi-exon	FALSE	canonical	3	24	junction_6	190.780264637095	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702638	82730109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
Isoform_94119_114	chr1	+	1703	8	FSM	ENSMUSG00000026150.15	ENSMUST00000160786.8	1645	8	-20	-38	1	1	multi-exon	FALSE	canonical	3	146	junction_5	134.32947615198	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702640	82730109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
Isoform_94122_183	chr1	+	1643	7	NIC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702640	82730109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
Isoform_94125_202	chr1	+	3271	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-213	-706	15	0	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817181	82874102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_94131_25	chr1	+	7891	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-213	-5326	15	-181	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGGCCTCTTCAATTG	NA	False	NA	9	True	AATAAA	-22	NA	82817181	82878722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_94139_48	chr1	+	2538	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	-8	5514	-8	-7	multi-exon	FALSE	canonical	3	119	junction_11	113.067826251915	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTATTGTTTTTGT	NA	False	NA	8	True	AATAAA	-8	NA	82817195	82873389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
Isoform_94148_44	chr1	+	3268	13	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	15	0	multi-exon	FALSE	canonical	3	110	junction_8	115.942843916973	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817181	82874102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_94149_46	chr1	+	2535	13	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-2	-7	multi-exon	FALSE	canonical	3	110	junction_8	115.942843916973	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTATTGTTTTTGT	NA	False	NA	8	True	AATAAA	-8	NA	82817201	82873389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_94152_11	chr1	+	7866	13	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-5	-186	multi-exon	FALSE	canonical	3	110	junction_8	115.942843916973	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGGGATGGCCTCTTC	NA	False	NA	4	True	AATAAA	-17	NA	82817198	82878717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_94154_11	chr1	+	2537	13	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_8	147.369056755103	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTATTGTTTTTGT	NA	False	NA	8	True	AATAAA	-8	NA	82817193	82873389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
Isoform_94158_18	chr1	+	2496	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000063380.11	2896	13	-211	611	14	-7	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTATTGTTTTTGT	NA	False	NA	8	True	AATAAA	-8	NA	82817180	82873389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_94159_11	chr1	+	3186	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000063380.11	2896	13	-190	-100	-2	-2	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCTAAGTTATGAATTT	NA	False	NA	12	True	ATTAAA	-18	NA	82817201	82874100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_9416_10	chr10	-	4768	1	ISM	ENSMUSG00000047146.18	ENSMUST00000050826.14	13986	11	70670	7	5195	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCACCTGGTAGTCTAT	6091	False	NA	-6	True	AATAAA	-14	NA	62645123	62640355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62640400_62645100
Isoform_94166_23	chr1	+	875	4	FSM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	24	2	12	-2	multi-exon	FALSE	canonical	0	0	junction_1	27.3536509852382	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTTCTGGTTTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	84817585	84878206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_84817690_84858812_84858922_84874210_84874384_84877717
Isoform_94167_8	chr1	+	864	4	FSM	ENSMUSG00000073633.10	ENSMUST00000139562.8	881	4	17	0	17	0	multi-exon	FALSE	canonical	3	8	junction_1	23.5843639350783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCTGGTTTGTAAT	4261	False	NA	NA	False	AATAAA	-15	NA	84844173	84878208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_84844265_84858812_84858922_84874210_84874384_84877717
Isoform_94168_26	chr1	+	3919	10	NIC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	-2	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	161.294072357845	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCTTGTGATGTCCTT	NA	False	NA	10	True	AATAAA	-11	NA	85721159	85779292	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_85721543_85723077_85723195_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
Isoform_94172_901	chr1	+	3787	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	18	0	18	0	multi-exon	FALSE	canonical	3	335	junction_1	34.2579826463848	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATGTCCTTTAGAC	NA	False	NA	15	True	AATAAA	-16	NA	85721179	85779297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
Isoform_94186_536	chr1	+	1915	6	FSM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	299	16	-39	-16	multi-exon	FALSE	canonical	3	192	junction_3	14.9853261559434	536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAAAAACAACAA	NA	False	NA	-24	True	NA	NA	NA	85822300	85836380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
Isoform_9419_6	chr10	-	7007	1	ISM	ENSMUSG00000047146.18	ENSMUST00000050826.14	13986	11	68435	3	2960	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGGTAGTCTATTTTT	3856	False	NA	-2	True	AATAAA	-18	NA	62647358	62640351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_-_62640400_62647400
Isoform_94198_2085	chr1	+	3222	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	37	-147	15	147	multi-exon	FALSE	canonical	3	1352	junction_6	102.249660417801	2085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTTGATTTGTTTTTC	NA	False	NA	28	True	AATAAA	-28	NA	85992377	86067020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
Isoform_94234_3	chr1	+	1975	19	FSM	ENSMUSG00000062590.14	ENSMUST00000155168.8	2435	19	-17	477	-13	-477	multi-exon	FALSE	canonical	3	78	junction_14	12.3513382090993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCCTCCTGCCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	86082488	86140912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771
Isoform_94235_96	chr1	+	2187	21	FSM	ENSMUSG00000062590.14	ENSMUST00000131412.8	2160	21	-26	-1	3	1	multi-exon	FALSE	canonical	3	78	junction_14	12.2982722363753	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATTCTCTTTATTGTT	NA	False	NA	9	True	AATAAA	-14	NA	86082510	86180212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998
Isoform_94236_46	chr1	+	2501	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	-3	2198	1	-2198	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCAGTTTGCTCTCTGGA	NA	False	NA	6	True	AATACA	-17	NA	86082502	86185351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
Isoform_94237_21	chr1	+	2544	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	0	2152	0	-2152	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTGCCCCAGAGTGC	NA	False	NA	52	True	NA	NA	NA	86082505	86185397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
Isoform_94239_5	chr1	+	4967	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	-16	-255	-12	255	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTCAAGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	86082489	86187804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
Isoform_94241_10	chr1	+	2382	21	NIC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	0	-2198	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	24.1024376360566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCAGTTTGCTCTCTGGA	NA	False	NA	6	True	AATACA	-17	NA	86082505	86185351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86184947
Isoform_94242_4	chr1	+	2182	21	NIC	ENSMUSG00000062590.14	novel	2160	21	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_18	23.30295045697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCATTCTCTTTATTG	NA	False	NA	7	True	AATAAA	-12	NA	86082510	86180210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140774_86140828_86172287_86172393_86179998
Isoform_94243_3	chr1	+	2374	21	NIC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	0	-2155	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	25.6009765438743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAATGCCTGCCCCAGAG	NA	False	NA	49	True	NA	NA	NA	86082501	86185394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
Isoform_94244_4	chr1	+	2414	21	NIC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	1	-2197	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	24.2433496035511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGTTTGCTCTCTGGAT	NA	False	NA	7	True	AATACA	-18	NA	86082502	86185352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_86082566_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
Isoform_94247_346	chr1	+	2341	2	FSM	ENSMUSG00000079445.4	ENSMUST00000113306.4	2582	2	230	11	-67	-11	multi-exon	FALSE	canonical	3	186	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTGAATTAGCTGCT	NA	False	NA	25	True	AATAAA	-16	NA	86231185	86235016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86231277_86232766
Isoform_94248_70	chr1	+	2589	2	FSM	ENSMUSG00000079445.4	ENSMUST00000113306.4	2582	2	-18	11	-18	-11	multi-exon	FALSE	canonical	3	186	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTGAATTAGCTGCT	NA	False	NA	25	True	AATAAA	-16	NA	86230937	86235016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86231277_86232766
Isoform_94260_21750	chr1	+	1200	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	0	16	0	-16	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	21750	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGTGTCTCAAAGCCT	NA	False	NA	41	True	AATAAA	-30	NA	86454447	86458418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
Isoform_9429_5	chr10	+	1773	1	Intergenic	novelGene_921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACTCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62666457	62668230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62666500_62668200
Isoform_9430_4	chr10	+	176	1	Intergenic	novelGene_922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAAAACACTGCTG	NA	False	NA	NA	False	NA	NA	NA	62710738	62710914	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62710700_62710900
Isoform_94303_27	chr1	+	2052	7	NIC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	11	-51	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	132.540140670247	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGTTATAGTCCAATC	6018	False	NA	42	True	AATACA	-32	NA	86510636	86533997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_86510819_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
Isoform_94305_683	chr1	+	1952	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	43	236	1	-62	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTCAATATTTGTT	NA	False	NA	31	True	AATACA	-21	NA	86514864	86533986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
Isoform_94310_60	chr1	+	2513	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	42	-324	0	-154	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATATCCTCACTGAAGT	NA	False	NA	16	True	NA	NA	NA	86514863	86534546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
Isoform_94312_21	chr1	+	1863	6	FSM	ENSMUSG00000026240.13	ENSMUST00000122884.2	2578	6	1	714	1	-62	multi-exon	FALSE	canonical	3	42	junction_3	130.042147013959	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTCAATATTTGTT	NA	False	NA	31	True	AATACA	-21	NA	86514864	86533986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86526724_86526928_86528804_86528911_86532779
Isoform_94314_16	chr1	+	3168	22	FSM	ENSMUSG00000053333.16	ENSMUST00000168237.8	3154	22	-13	-1	-2	1	multi-exon	FALSE	canonical	3	10	junction_6	26.8303649010897	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	16	True	AATAAA	-17	NA	86631527	86977818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86719137_86719180_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
Isoform_94315_252	chr1	+	3102	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-13	-4	2	1	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	16	True	AATAAA	-17	NA	86631551	86977818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
Isoform_94316_14	chr1	+	3228	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-139	-4	-104	1	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	16	True	AATAAA	-17	NA	86631425	86977818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
Isoform_94317_7	chr1	+	3031	20	NIC	ENSMUSG00000053333.16	novel	3085	21	NA	NA	-20	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	24.2666397775667	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGTCTGTGTAGATGC	NA	False	NA	11	True	AATAAA	-12	NA	86631509	86977813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
Isoform_9432_8	chr10	+	173	1	Intergenic	novelGene_923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	62727933	62728106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62727900_62728100
Isoform_94321_4	chr1	+	2562	11	FSM	ENSMUSG00000036500.5	ENSMUST00000044878.4	1680	11	-70	-812	-35	812	multi-exon	TRUE	canonical	0	0	junction_2	0.894427190999916	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAGCAATAGTCATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	87052659	87056446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87052797_87052879_87052997_87053113_87053230_87053348_87053524_87053601_87053775_87054031_87054167_87054247_87054321_87054449_87054585_87054657_87054850_87055051_87055166_87055251
Isoform_94322_6	chr1	+	2933	12	FSM	ENSMUSG00000026251.14	ENSMUST00000073252.9	2925	12	-6	-2	-6	2	multi-exon	FALSE	canonical	0	0	junction_4	1.67628081041689	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGTGGTAATTTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	87118352	87127794	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87118465_87118696_87118852_87119241_87119287_87119935_87120046_87120207_87120364_87120567_87120678_87122521_87122723_87123206_87123319_87123404_87123520_87125004_87125210_87125296_87125416_87126301
Isoform_94327_716	chr1	+	959	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	50	798	-15	-6	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTTGTCTCATGCTC	NA	False	NA	9	True	AATAAA	-9	NA	87141685	87155780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
Isoform_94328_62	chr1	+	992	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	17	798	-8	-6	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTTGTCTCATGCTC	NA	False	NA	9	True	AATAAA	-9	NA	87141652	87155780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
Isoform_94332_126	chr1	+	3105	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	50	239	-15	-239	multi-exon	FALSE	canonical	3	212	junction_6	847.519796556727	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGCAGGCTGTGGACTT	NA	False	NA	13	True	AATAAA	-16	NA	87141685	87167971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
Isoform_94345_258	chr1	+	1423	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	-306	2	1	-2	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTCTCATGCTCTTGC	NA	False	NA	13	True	AATAAA	-13	NA	87141701	87155784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
Isoform_94347_558	chr1	+	1044	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	69	6	69	-6	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTTGTCTCATGCTC	NA	False	NA	9	True	AATAAA	-9	NA	87142076	87155780	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
Isoform_9435_26	chr10	-	177	1	Intergenic	novelGene_924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAACCTA	NA	False	NA	NA	False	NA	NA	NA	62737218	62737041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62737000_62737200
Isoform_9436_37	chr1	+	177	1	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTTAAGTT	NA	False	NA	NA	False	NA	NA	NA	74867089	74867266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_74867100_74867300
Isoform_94360_150	chr1	+	3584	7	NIC	ENSMUSG00000026254.18	novel	3394	7	NA	NA	-15	-236	intron_retention	FALSE	canonical	3	212	junction_6	831.352646126914	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	16	True	AATAAA	-19	NA	87141685	87167974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
Isoform_9437_5	chr10	-	398	1	Intergenic	novelGene_926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAATAAAA	2141	False	NA	NA	False	NA	NA	NA	62762260	62761862	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62761900_62762300
Isoform_94376_30	chr1	+	1907	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	-53	0	-53	0	multi-exon	FALSE	canonical	3	11	junction_2	0.942809041582063	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTGCCTTTTTGGT	1355	False	NA	NA	False	AATAAA	-25	NA	87192031	87238561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
Isoform_94377_3	chr1	+	1781	5	FSM	ENSMUSG00000026255.16	ENSMUST00000118687.8	1726	5	-53	-2	-53	-1	multi-exon	FALSE	canonical	2	6	junction_4	2.58602010819715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCAGTGTGCCTTTTTGG	1355	False	NA	NA	False	AATAAA	-24	NA	87192031	87238560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382_87237569_87237693
Isoform_94381_18	chr1	+	2948	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	-1	68	0	-68	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTTTTCAGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	87254750	87285438	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
Isoform_9439_16	chr13	+	179	1	Genic_Genomic	ENSMUSG00000114458.2	novel	NA	NA	NA	NA	-11	-2397	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAGAGACCAGT	NA	False	NA	NA	False	NA	NA	NA	98937668	98937847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr13_+_98937700_98937800
Isoform_94397_4	chr1	+	3580	7	FSM	ENSMUSG00000057715.14	ENSMUST00000135014.8	6451	7	-162	3033	2	-1405	multi-exon	FALSE	canonical	3	15	junction_4	4.57043640026736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCATGGAAAAGTAATCT	NA	False	NA	NA	False	AATAAA	-18	NA	11484330	11668812	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374
Isoform_94399_4	chr1	+	3384	7	FSM	ENSMUSG00000057715.14	ENSMUST00000135014.8	6451	7	32	3035	32	-1407	multi-exon	FALSE	canonical	3	15	junction_4	4.57043640026736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCATGCATGGAAAAGTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	11484524	11668810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374
Isoform_9440_64	chr10	-	176	1	Intergenic	novelGene_928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATATTTTTATTA	606	False	NA	NA	False	NA	NA	NA	62763795	62763619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62763600_62763800
Isoform_94418_160	chr1	+	3905	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	37	0	37	0	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTCCTGACTGTGT	9407	False	NA	14	True	AATAAA	-15	NA	87603997	87648224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
Isoform_94423_22	chr1	+	3347	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	-12	790	-12	18	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTTAAGTGCTTT	9358	False	NA	20	True	NA	NA	NA	87603948	87647434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
Isoform_94425_455	chr1	+	4088	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	37	0	37	0	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTCCTGACTGTGT	9407	False	NA	14	True	AATAAA	-15	NA	87603997	87648224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
Isoform_94426_22	chr1	+	4137	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	-12	0	-12	0	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTCCTGACTGTGT	9358	False	NA	14	True	AATAAA	-15	NA	87603948	87648224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
Isoform_9445_51	chr10	-	177	1	Intergenic	novelGene_929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTATTTC	NA	False	NA	NA	False	NA	NA	NA	62818886	62818709	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62818700_62818900
Isoform_94459_42	chr1	+	3066	18	FSM	ENSMUSG00000026289.16	ENSMUST00000027512.13	3130	18	59	5	-4	1	multi-exon	FALSE	canonical	3	20	junction_7	58.4556141318301	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGCGTCTTGATTG	7304	False	NA	18	True	AATAAA	-27	NA	87683793	87720145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_9446_3	chr10	-	2004	1	FSM	ENSMUSG00000040006.14	ENSMUST00000188270.2	1405	1	7	-606	5	606	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACACATAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	7668581	7666577	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_7666600_7668600
Isoform_94462_254	chr1	+	3004	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	1	-1	1	1	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGCGTCTTGATTG	7309	False	NA	18	True	AATAAA	-27	NA	87683798	87720145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_94464_7	chr1	+	3150	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-145	-1	61	1	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGCGTCTTGATTG	7163	False	NA	18	True	AATAAA	-27	NA	87683652	87720145	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_94466_7	chr1	+	3309	16	NIC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	160	junction_8	19.8422668955832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAAACTCCTTGCGTCTT	7243	False	NA	13	True	AATAAA	-22	NA	87683732	87720140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_94468_9	chr1	+	3368	17	NNC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	0	-10	intron_retention	TRUE	canonical	2	6	junction_8	64.7815741067628	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTTTCAAACTCCTTG	7308	False	NA	7	True	AATAAA	-16	NA	87683797	87720134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_94472_11	chr1	+	733	4	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-11	29031	-11	-285	5prime_fragment	FALSE	canonical	3	363	junction_2	19.7033556081755	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTTTTCCCTCTTTGTG	4059	False	NA	NA	False	ATTAAA	-19	NA	87780997	87843181	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821
Isoform_94475_525	chr1	+	5700	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-6	1	-6	-1	multi-exon	FALSE	canonical	3	256	junction_21	37.602590545009	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4064	False	NA	19	True	AATAAA	-23	NA	87781002	87872211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
Isoform_94479_9	chr1	+	6394	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-10	-689	-10	1	multi-exon	FALSE	canonical	3	256	junction_21	37.602590545009	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTGTCTATTCTGTT	4060	False	NA	5	True	AATAAA	-16	NA	87780998	87872901	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
Isoform_9448_80	chr10	+	186	1	Antisense	novelGene_ENSMUSG00000040006.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGTAAAGAGTGTAC	330	False	NA	NA	False	NA	NA	NA	7667862	7668048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_7667900_7668000
Isoform_94480_41	chr1	+	5561	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_28	64.6690554646801	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGCATTCCTGTCCTC	4071	False	NA	18	True	AATAAA	-22	NA	87781009	87872210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
Isoform_94482_7	chr1	+	5596	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_21	67.4020358652134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4055	False	NA	20	True	AATAAA	-24	NA	87780993	87872212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
Isoform_94484_9	chr1	+	5509	28	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	63.0144887208626	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4064	False	NA	20	True	AATAAA	-24	NA	87781002	87872212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_87781179_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
Isoform_94499_10	chr1	+	4614	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	164	820	-91	1	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTCTCTGTGCTTGC	NA	False	NA	13	True	AATAAA	-37	NA	12762664	12930596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
Isoform_9450_4	chr10	-	169	1	Intergenic	novelGene_930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	62819131	62818962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62819000_62819100
Isoform_94500_7	chr1	+	5391	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	205	2	-50	-2	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCGTTTCAGAGAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	12762705	12931414	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
Isoform_94501_12	chr1	+	4553	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	230	815	-25	0	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGCTTGCTAGAT	NA	False	NA	18	True	AATAAA	-42	NA	12762730	12930601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
Isoform_94502_3	chr1	+	5281	21	FSM	ENSMUSG00000016918.16	ENSMUST00000180062.8	4636	21	173	-818	-36	-3	multi-exon	FALSE	canonical	0	0	junction_1	11.3950647211852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACTCGTTTCAGAGAAA	NA	False	NA	NA	False	AATAAA	-14	NA	12762719	12931413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_12762909_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
Isoform_94503_8	chr1	+	4515	22	FSM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	107	8	107	-2	multi-exon	FALSE	canonical	3	16	junction_1	8.51675685882192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCGGCTCTCTCTGTGCT	NA	False	NA	10	True	AATAAA	-34	NA	12788859	12930593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
Isoform_94504_4	chr1	+	5518	22	FSM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	-73	-815	-3	0	multi-exon	FALSE	canonical	3	16	junction_1	8.51675685882192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCGTTTCAGAGAAATGA	NA	False	NA	NA	False	AATAAA	-17	NA	12788679	12931416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
Isoform_94505_5	chr1	+	4648	22	FSM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	-23	5	-23	1	multi-exon	FALSE	canonical	3	16	junction_1	8.51675685882192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTCTCTGTGCTTGC	NA	False	NA	13	True	AATAAA	-37	NA	12788729	12930596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
Isoform_94506_8	chr1	+	5298	22	FSM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	149	-817	149	2	multi-exon	FALSE	canonical	3	16	junction_1	8.51675685882192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGTTTCAGAGAAATGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	12788901	12931418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
Isoform_94508_7	chr1	+	468	3	FSM	ENSMUSG00000097398.3	ENSMUST00000181016.3	479	3	12	-1	12	1	multi-exon	FALSE	canonical	3	8	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTCTTGGCTCCTTA	NA	False	NA	18	True	NA	NA	NA	88682623	88683459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_88682681_88682805_88683013_88683255
Isoform_94509_17	chr1	+	385	2	NIC	ENSMUSG00000097398.3	novel	358	3	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTCTTGGCTCCTT	NA	False	NA	17	True	NA	NA	NA	88682591	88683458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_88682774_88683255
Isoform_94511_3	chr1	+	2632	3	ISM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	-17	15157	-17	-15157	5prime_fragment	FALSE	canonical	3	96	junction_1	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88998119	89067633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_88998320_89034979_89035059_89065280
Isoform_94512_29	chr1	+	4960	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	35	0	-3	0	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGACATTTCAAC	NA	False	NA	12	True	ATTAAA	-22	NA	88998171	89082790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
Isoform_94513_190	chr1	+	3702	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	35	1258	-3	-1258	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCTTTTCAAATTATGT	NA	False	NA	39	True	AGTAAA	-33	NA	88998171	89081532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
Isoform_94515_16	chr1	+	3765	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	-33	1263	-33	-1263	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGCCTTTTCAAAT	NA	False	NA	34	True	AGTAAA	-28	NA	88998103	89081527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
Isoform_9452_14	chr10	-	1337	1	NIC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	7	-4744	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGGAAAAAAAAAAAAAA	5788	False	NA	NA	False	NA	NA	NA	62859666	62858329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_-_62858300_62859700
Isoform_94522_15	chr1	+	4173	19	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	-25	-235	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	123.248268963378	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAACGAAATCATGAAT	NA	False	NA	18	True	AAAACA	-45	NA	89382502	89817488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_94523_64	chr1	+	4264	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	13	7644	13	-28	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATTGATTTTTGCA	NA	False	NA	11	True	AATAAA	-12	NA	89382540	89817695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_94524_84	chr1	+	4053	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	17	7851	17	-235	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAACGAAATCATGAAT	NA	False	NA	18	True	AAAACA	-45	NA	89382544	89817488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_94527_3	chr1	+	4348	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	-71	7644	-71	-28	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATTGATTTTTGCA	NA	False	NA	11	True	AATAAA	-12	NA	89382456	89817695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_94528_8	chr1	+	5275	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	-4	6650	-4	966	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTATTTTTGAAGAATG	NA	False	NA	NA	False	AATAGA	-16	NA	89382523	89818689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_94530_20	chr1	+	3948	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	-96	226	-28	-226	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGAATTCGGCTGAA	NA	False	NA	27	True	NA	NA	NA	89382499	89817497	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_94532_12	chr1	+	4126	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	-51	3	17	-3	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCACCCATGTTAATT	NA	False	NA	36	True	AATAAA	-37	NA	89382544	89817720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_94534_4	chr1	+	3986	16	NIC	ENSMUSG00000055013.17	novel	4078	17	NA	NA	-28	-26	combination_of_known_splicesites	FALSE	canonical	3	11	junction_11	106.011823239989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTGATTTTTGCACA	NA	False	NA	13	True	AATAAA	-14	NA	89382499	89817697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_94536_80	chr1	+	2065	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	-8	-685	-8	685	multi-exon	FALSE	canonical	3	31	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCGATTCTTTGAAGCTC	NA	False	NA	20	True	GATAAA	-27	NA	89857947	89860269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89858176_89858432
Isoform_94538_4	chr1	+	1421	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	-47	-2	-47	2	multi-exon	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGAGTCTTTTATC	NA	False	NA	-12	True	NA	NA	NA	89857908	89859586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89858176_89858432
Isoform_94539_4	chr1	+	2615	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	4	-1247	4	-181	multi-exon	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTGACAGTCTTCAAT	NA	False	NA	NA	False	AATAAA	-24	NA	89857959	89860831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89858176_89858432
Isoform_9454_47	chr10	-	220	1	Intergenic	novelGene_931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	8480	False	NA	NA	False	NA	NA	NA	62871331	62871111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62871100_62871300
Isoform_94540_71	chr1	+	2014	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	21	1030	-5	-1030	multi-exon	FALSE	canonical	3	47	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCATGTGTGCTTTGG	NA	False	NA	7	True	AATAAA	-15	NA	90131722	90143443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_90131810_90141516
Isoform_94541_57	chr1	+	1795	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	492	0	-3	0	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAGTGGGTTACCTAA	NA	False	NA	21	True	ATTAAA	-22	NA	90531194	90541063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
Isoform_94542_315	chr1	+	1579	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	492	216	-3	1	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGCTCTAGAAATTTC	NA	False	NA	26	True	AATAAA	-31	NA	90531194	90540847	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
Isoform_94544_109	chr1	+	1773	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	514	0	-4	0	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAGTGGGTTACCTAA	NA	False	NA	21	True	ATTAAA	-22	NA	90531216	90541063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
Isoform_94545_472	chr1	+	1556	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	514	217	-4	0	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGCTCTAGAAATTT	NA	False	NA	25	True	AATAAA	-30	NA	90531216	90540846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
Isoform_94548_17	chr1	+	2573	7	FSM	ENSMUSG00000034432.12	ENSMUST00000191510.7	2593	7	19	1	-4	-1	multi-exon	FALSE	canonical	3	708	junction_6	25.9293913027925	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTGGCTCTAGAAATT	NA	False	NA	24	True	AATAAA	-29	NA	90531216	90540845	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_90531350_90532096_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
Isoform_9455_18	chr10	-	178	1	Intergenic	novelGene_932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAAGTCAAAGG	NA	False	NA	NA	False	NA	NA	NA	62977504	62977326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62977300_62977500
Isoform_94553_5	chr1	+	2991	16	FSM	ENSMUSG00000026303.7	ENSMUST00000027528.7	4499	16	-11	1519	-11	-1519	multi-exon	FALSE	canonical	0	0	junction_5	0.718021974284601	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCAGAGCTCCTCTCAG	NA	False	NA	NA	False	AATAAA	-22	NA	90842795	90877345	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_90842976_90849566_90849701_90855704_90855927_90856044_90856158_90857811_90857916_90859215_90859339_90861038_90861244_90863034_90863175_90865375_90865460_90867080_90867234_90867441_90867598_90869409_90869503_90870593_90870681_90871416_90871472_90873335_90873437_90876304
Isoform_94554_9	chr1	+	3602	9	NIC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.5951045123867	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTACTGGTTGTTCT	NA	False	NA	3	True	AATAAA	-17	NA	90926459	91045036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
Isoform_94555_5	chr1	+	2100	13	FSM	ENSMUSG00000026305.16	ENSMUST00000068116.13	2050	13	-44	-6	-2	2	multi-exon	FALSE	canonical	3	14	junction_1	28.0697296428416	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTTTTGTTTTTTACT	NA	False	NA	NA	False	AATGAA	-15	NA	90926456	91056668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
Isoform_94557_3	chr1	+	2010	12	NIC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	29.1978149301316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTGTGTGGGTTTTGTT	NA	False	NA	NA	False	AATGAA	-8	NA	90926467	91056661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
Isoform_94558_6	chr1	+	3803	10	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	32.7395257022742	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTACTGGTTGTTCT	NA	False	NA	3	True	AATAAA	-17	NA	90981181	91045036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91038076_91038170_91039877_91040020_91042317
Isoform_94559_75	chr1	+	3715	9	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_5	16.4088390814219	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTACTGGTTGTTCT	NA	False	NA	3	True	AATAAA	-17	NA	90981176	91045036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
Isoform_9456_7	chr10	-	178	1	Intergenic	novelGene_933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTTTCCA	NA	False	NA	NA	False	NA	NA	NA	63112512	63112334	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_63112300_63112500
Isoform_94561_19	chr1	+	2177	13	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	25.9117090649511	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981207	91056666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
Isoform_94562_37	chr1	+	3631	8	FSM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	13	1	13	-1	multi-exon	FALSE	canonical	3	45	junction_4	18.7823190848223	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTACTGGTTGTTCT	NA	False	NA	3	True	AATAAA	-17	NA	90981188	91045036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
Isoform_94566_22	chr1	+	2120	12	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	27.2156979494562	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981192	91056666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
Isoform_94567_47	chr1	+	3846	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	9	-4	9	4	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGCTTTCTGTAGTG	4273	False	NA	15	True	AATAAA	-21	NA	91072833	91098521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
Isoform_94568_102	chr1	+	3337	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	9	505	9	-3	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCAAGACTCCAAGCTG	4273	False	NA	29	True	ATTAAA	-45	NA	91072833	91098012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
Isoform_94570_3	chr1	+	5075	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-31	1	intron_retention	FALSE	canonical	3	84	junction_2	27.9297512684442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4219	False	NA	12	True	AATAAA	-18	NA	91072779	91098518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
Isoform_94571_60	chr1	+	3240	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	9	-9	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	30.8108945746435	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTACTCAAGACTCC	4273	False	NA	23	True	ATTAAA	-39	NA	91072833	91098006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
Isoform_94573_19	chr1	+	3776	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	1	3	combination_of_known_junctions	TRUE	canonical	3	55	junction_1	30.8108945746435	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGTGCTTTCTGTAGT	4251	False	NA	14	True	AATAAA	-20	NA	91072811	91098520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
Isoform_94575_10	chr1	+	1351	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	20	-217	-6	30	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTTTGTATTCATTGT	331	False	NA	NA	False	NA	NA	NA	91178052	91213679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_94576_5	chr1	+	1920	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	13	-779	5	494	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTGCCTAGCATTCAC	324	False	NA	8	True	AATAAA	-20	NA	91178045	91214241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_94579_5	chr1	+	1890	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-34	-746	-6	494	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTGCCTAGCATTCAC	331	False	NA	8	True	AATAAA	-20	NA	91178052	91214241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_94581_8	chr1	+	972	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-27	165	1	-132	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTAGGCTGTCTGGTGGA	338	False	NA	NA	False	NA	NA	NA	91178059	91213330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_94582_47	chr1	+	1843	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	15	-495	-3	495	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTAGCATTCACA	334	False	NA	9	True	AATAAA	-21	NA	91178055	91214242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_94583_167	chr1	+	1281	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	15	67	-3	31	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTGTATTCATTGTA	334	False	NA	NA	False	NA	NA	NA	91178055	91213680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_94586_5	chr1	+	1409	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	-113	67	-98	31	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTGTATTCATTGTA	206	False	NA	NA	False	NA	NA	NA	91177927	91213680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_94587_8	chr1	+	4195	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	21	-2853	3	-1459	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGACTCATTTGCTCT	340	False	NA	NA	False	CATAAA	-24	NA	91178061	91216600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_94589_12	chr1	+	1842	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	-5	3817	-5	495	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTAGCATTCACA	332	False	NA	9	True	AATAAA	-21	NA	91178053	91214242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_9459_7	chr10	+	157	1	Intergenic	novelGene_934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGAGCCAGCGGGGTT	NA	False	NA	NA	False	NA	NA	NA	63170379	63170536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_63170400_63170500
Isoform_94590_34	chr1	+	1223	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	0	4431	0	-21	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATTTGTAATTTGTACA	337	False	NA	NA	False	NA	NA	NA	91178058	91213628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_94594_155	chr1	+	2193	12	FSM	ENSMUSG00000026307.13	ENSMUST00000027532.13	2202	12	8	1	8	-1	multi-exon	FALSE	canonical	3	51	junction_11	10.6693350656825	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTGAAGTGGCCTGGG	NA	False	NA	14	True	ATTAAA	-23	NA	91226067	91248796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
Isoform_94596_3	chr1	+	3059	8	FSM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	28	2	28	-2	multi-exon	TRUE	canonical	0	0	junction_1	0.728431359084683	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCTCTGTCTGCTACAG	NA	False	NA	NA	False	AATAAA	-23	NA	91278765	91290136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91278858_91281327_91282175_91283173_91283310_91285055_91285143_91285476_91285633_91286509_91286699_91287057_91287204_91288730
Isoform_94597_70	chr1	+	2852	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	-37	0	-37	0	multi-exon	FALSE	canonical	3	23	junction_7	6.01698276818648	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCATTCTCTGTCTGTA	NA	False	NA	8	True	ATTAAA	-20	NA	91294114	91301939	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
Isoform_94599_3	chr1	+	2485	9	NNC	ENSMUSG00000047443.15	novel	2815	8	NA	NA	-17	2327	intron_retention	FALSE	canonical	0	0	junction_8	12.4899959967968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATATGTGTAATCTCAG	NA	False	NA	NA	False	NA	NA	NA	91294134	91304266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099_91300154_91302827
Isoform_9460_3	chr10	+	182	1	Intergenic	novelGene_935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATTGTTCTTTGGAGC	7986	False	NA	NA	False	NA	NA	NA	63190790	63190972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_63190800_63191000
Isoform_94600_3	chr1	+	4129	6	NIC	ENSMUSG00000047443.15	novel	2815	8	NA	NA	-40	-4	intron_retention	FALSE	canonical	3	23	junction_5	5.65685424949238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGGCATTCTCTGTC	NA	False	NA	4	True	ATTAAA	-16	NA	91294111	91301935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_91294371_91296086_91296204_91297092_91298065_91298136_91298246_91298346_91299183_91300099
Isoform_94603_3	chr1	+	2388	5	ISM	ENSMUSG00000034292.14	ENSMUST00000189341.7	2257	16	0	25175	0	-25175	5prime_fragment	FALSE	canonical	3	49	junction_3	4.55521678957215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTATTACTTACTGA	8937	False	NA	NA	False	NA	NA	NA	91422368	91430503	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726
Isoform_94604_3	chr1	+	5025	14	ISM	ENSMUSG00000034292.14	ENSMUST00000047242.9	3474	15	-37	1	10	-1	intron_retention	FALSE	canonical	2	37	junction_5	6.43952293429426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTATGGACTGTCAAATT	8947	False	NA	7	True	ATTAAA	-23	NA	91422378	91457028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91446015_91446037_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600
Isoform_94605_72	chr1	+	3506	15	FSM	ENSMUSG00000034292.14	ENSMUST00000047242.9	3474	15	-34	2	13	-2	multi-exon	FALSE	canonical	2	37	junction_5	6.41943795619752	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTATGGACTGTCAAAT	8950	False	NA	6	True	ATTAAA	-22	NA	91422381	91457027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91446015_91446037_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
Isoform_94610_3	chr1	+	2336	5	FSM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	-19	3509	-19	-8	multi-exon	FALSE	canonical	3	11	junction_1	8.86002257333467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAGGGGATTTAACTTG	8936	False	NA	NA	False	AATAAA	-19	NA	91468416	91483802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91468587_91471872_91472020_91474649_91474953_91479775_91480162_91482472
Isoform_94611_3	chr1	+	5810	5	FSM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	11	5	-7	-5	multi-exon	FALSE	canonical	3	11	junction_1	8.86002257333467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGTGTCTGGCTCTCT	8966	False	NA	2	True	AATAAA	-14	NA	91468446	91487306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91468587_91471872_91472020_91474649_91474953_91479775_91480162_91482472
Isoform_94613_8	chr1	+	5839	5	FSM	ENSMUSG00000026311.17	ENSMUST00000086843.11	2490	5	153	-3502	-17	1	multi-exon	FALSE	canonical	3	23	junction_1	3.93700393700591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGGCTCTCTAGCTCT	8938	False	NA	8	True	AATAAA	-20	NA	91468418	91487312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91468587_91471877_91472020_91474649_91474953_91479775_91480162_91482472
Isoform_94614_12	chr1	+	1352	5	FSM	ENSMUSG00000026311.17	ENSMUST00000086843.11	2490	5	167	971	-3	0	multi-exon	FALSE	canonical	3	23	junction_1	3.93700393700591	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTCTGTTTTGGATTC	8952	False	NA	NA	False	NA	NA	NA	91468432	91482839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91468587_91471877_91472020_91474649_91474953_91479775_91480162_91482472
Isoform_94616_3	chr1	+	5346	5	FSM	ENSMUSG00000026311.17	ENSMUST00000086843.11	2490	5	14	-2870	-9	-631	multi-exon	FALSE	canonical	3	23	junction_1	3.93700393700591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCCTTCCCACATGCC	8799	False	NA	7	True	AATAAA	-16	NA	91468279	91486680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_91468587_91471877_91472020_91474649_91474953_91479775_91480162_91482472
Isoform_94617_106	chr1	+	3628	9	FSM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	-19	567	-19	-567	multi-exon	FALSE	canonical	3	25	junction_8	9.32654142756038	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTGGTAAGACTCGGT	7164	False	NA	21	True	ATTAAA	-32	NA	92759347	92787934	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
Isoform_94619_14	chr1	+	3919	9	FSM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	-299	556	-299	-556	multi-exon	FALSE	canonical	3	25	junction_8	9.32654142756038	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCGGTGTGTACATGTG	6884	False	NA	32	True	ATTAAA	-43	NA	92759067	92787945	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
Isoform_9462_3	chr10	+	194	1	Intergenic	novelGene_936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	63212314	63212508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_63212300_63212500
Isoform_94620_13	chr1	+	1316	2	FSM	ENSMUSG00000047067.8	ENSMUST00000060913.8	1314	2	-9	7	-9	-7	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAACCCCCGAGTTGCT	2846	False	NA	NA	False	AATAAA	-7	NA	92834693	92836150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92835146_92835286
Isoform_94621_162	chr1	+	3021	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	48	268	6	1	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGACCTCCCTTCCTGT	6705	False	NA	20	True	ATTAAA	-14	NA	92838552	92848295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
Isoform_94623_28	chr1	+	3086	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	-17	268	-17	1	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGACCTCCCTTCCTGT	6640	False	NA	20	True	ATTAAA	-14	NA	92838487	92848295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
Isoform_94627_5	chr1	+	3303	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	34	0	-8	0	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTTTAGTCTCTGTG	6691	False	NA	NA	False	AAAAAG	-18	NA	92838538	92848563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
Isoform_94628_3	chr1	+	3390	10	NIC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	-12	7	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	7.57350808353421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCCTTCCTGTCTGTCA	6715	False	NA	26	True	ATTAAA	-20	NA	92838562	92848301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
Isoform_94631_36	chr1	+	1298	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-29	-1	-29	1	multi-exon	FALSE	canonical	3	122	junction_1	7.1336448530109	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGGACCTGCTGTGGTT	2621	False	NA	19	True	CATAAA	-19	NA	92862458	92868695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
Isoform_94632_6	chr1	+	1998	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-9	-721	-9	721	multi-exon	FALSE	canonical	3	122	junction_1	7.1336448530109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAATAATCCAGAAC	2641	False	NA	NA	False	AATAAA	-7	NA	92862478	92869415	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
Isoform_94634_294	chr1	+	2523	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	381	-2	-9	2	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAGTCTTGTTCCAAAAA	2641	False	NA	NA	False	AATAAA	-16	NA	92862478	92875665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
Isoform_94636_14	chr1	+	2893	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	10	-1	10	1	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTAGTCTTGTTCCAAAA	2270	False	NA	NA	False	AATAAA	-15	NA	92862107	92875664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
Isoform_94637_20	chr1	+	2824	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	78	0	78	0	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAGTCTTGTTCCAAA	2338	False	NA	NA	False	AATAAA	-14	NA	92862175	92875663	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
Isoform_94642_330	chr1	+	3660	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	785	5870	-16	-5870	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGATAGACTTGAGCT	NA	False	NA	19	True	AATAAA	-21	NA	93271360	93295341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
Isoform_94646_530	chr1	+	1316	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	785	8214	-16	-8214	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATGAAAGTTATTGTAG	NA	False	NA	25	True	ATTAAA	-26	NA	93271360	93292997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
Isoform_9466_6	chr10	-	246	1	Intergenic	novelGene_937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAAAGAAATT	1880	False	NA	NA	False	NA	NA	NA	63242272	63242026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_63242000_63242300
Isoform_94666_339	chr1	+	1633	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	12	623	1	-41	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACGGTTTGTTCTATTCC	NA	False	NA	10	True	ATTAAA	-15	NA	15875881	15913653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
Isoform_94679_11	chr1	+	2270	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	5	-7	5	7	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGCATCTTGAATCAGAA	NA	False	NA	NA	False	AATAAA	-31	NA	15875874	15914283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
Isoform_94685_20	chr1	+	1556	9	FSM	ENSMUSG00000025925.15	ENSMUST00000027057.8	1581	9	-16	41	2	-41	multi-exon	FALSE	canonical	3	29	junction_3	336.315978656977	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACGGTTTGTTCTATTCC	NA	False	NA	10	True	ATTAAA	-15	NA	15875871	15913653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
Isoform_94686_77	chr1	+	3329	14	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	-1	-530	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	343.313233551171	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406741	93437452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_93406791_93407185_93407322_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_94687_1762	chr1	+	3193	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	56	530	-1	-530	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406741	93437452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_94695_106	chr1	+	3189	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	28	2	28	-2	multi-exon	FALSE	canonical	3	41	junction_1	266.051999929838	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTAGTCCTCTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	93406742	93437453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_9470_5	chr10	-	1080	1	FSM	ENSMUSG00000048185.6	ENSMUST00000054760.6	425	1	105	-760	105	760	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATTCGAAGAAAAAAAAAA	NA	False	NA	29	True	ATTAAA	-18	NA	63257463	63256383	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_63256400_63257500
Isoform_94700_25	chr1	+	3243	13	NIC	ENSMUSG00000026276.21	novel	477	6	NA	NA	-4	-530	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	275.56259371612	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406937	93437452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_93407037_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_9471_9	chr10	+	173	1	Intergenic	novelGene_938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTTTGAAGCTGGCAC	NA	False	NA	NA	False	NA	NA	NA	63298476	63298649	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_63298500_63298600
Isoform_94718_6	chr1	+	3713	27	FSM	ENSMUSG00000034066.14	ENSMUST00000120301.8	3937	27	34	190	1	-190	multi-exon	FALSE	canonical	0	0	junction_19	3.25017068281892	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCATCCCCTTTGCCCTA	NA	False	NA	NA	False	NA	NA	NA	93439834	93549508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93439907_93456290_93456502_93487957_93488063_93488865_93488909_93491030_93491110_93495138_93495237_93496802_93496918_93497594_93497743_93502092_93502189_93504091_93504256_93504544_93504614_93505369_93505428_93507461_93507721_93527644_93527824_93531099_93531190_93531931_93532066_93533063_93533146_93535154_93535393_93537697_93537829_93540113_93540183_93540839_93540930_93545273_93545357_93546224_93546344_93546614_93546773_93547875_93547984_93548214_93548367_93548945
Isoform_9472_13	chr10	-	176	1	Intergenic	novelGene_939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACGAGAGGGGAA	NA	False	NA	NA	False	NA	NA	NA	63303151	63302975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_63303000_63303200
Isoform_94720_53	chr1	+	1335	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	132	1	90	-1	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGAGACTCTACTCTGC	NA	False	NA	5	True	AATAAA	-15	NA	93613513	93623485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
Isoform_94721_20	chr1	+	1556	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	-89	1	-89	-1	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGAGACTCTACTCTGC	NA	False	NA	5	True	AATAAA	-15	NA	93613292	93623485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
Isoform_94722_9	chr1	+	1607	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	-140	1	-140	-1	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGAGACTCTACTCTGC	NA	False	NA	5	True	AATAAA	-15	NA	93613241	93623485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
Isoform_94723_3	chr1	+	2080	4	NIC	ENSMUSG00000026278.15	novel	1468	5	NA	NA	-46	3	intron_retention	FALSE	canonical	3	47	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTCTACTCTGCTTTC	NA	False	NA	9	True	AATAAA	-19	NA	93613335	93623489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_93614392_93616878_93617008_93621781_93621946_93622758
Isoform_94724_14	chr1	+	2937	13	NIC	ENSMUSG00000026280.18	novel	513	6	NA	NA	-15	-1183	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	90.4551761309926	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGTCTTGTGTGTGT	NA	False	NA	NA	False	GATAAA	-15	NA	93679206	93717149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_93679304_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
Isoform_94726_139	chr1	+	2872	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	118	1183	-12	-1183	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGTCTTGTGTGTGT	NA	False	NA	NA	False	GATAAA	-15	NA	93682744	93717149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
Isoform_94727_89	chr1	+	2931	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	59	1183	-24	-1183	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGTCTTGTGTGTGT	NA	False	NA	NA	False	GATAAA	-15	NA	93682685	93717149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
Isoform_9473_5	chr10	+	187	1	Intergenic	novelGene_940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAGTATTTTGTATTA	NA	False	NA	NA	False	NA	NA	NA	63309068	63309255	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_63309100_63309300
Isoform_9474_4	chr10	+	178	1	Intergenic	novelGene_941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63309403	63309581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_63309400_63309600
Isoform_94742_65	chr1	+	4546	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	-13	0	-13	0	multi-exon	FALSE	canonical	0	0	junction_4	74.6873756509937	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACATTTGAAAGTAGA	NA	False	NA	NA	False	AATAAA	-12	NA	93731673	93749817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
Isoform_94743_246	chr1	+	4519	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	11	3	-7	-3	multi-exon	FALSE	canonical	0	0	junction_4	74.6873756509937	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAACATTTGAAAGT	NA	False	NA	NA	False	AATAAA	-9	NA	93731697	93749814	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
Isoform_94753_8	chr1	+	2854	6	FSM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	-451	1184	-451	3	multi-exon	FALSE	canonical	2	4	junction_1	4.02988833592198	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTTATTAGCTATC	NA	False	NA	NA	False	ATTAAA	-16	NA	16175546	16202774	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_16176531_16178018_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
Isoform_94756_19	chr1	+	2912	10	FSM	ENSMUSG00000073609.10	ENSMUST00000097633.10	3232	10	8	312	8	-312	multi-exon	FALSE	canonical	3	12	junction_1	12.154357040244	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTTACCTTGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	93752969	93779758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93753042_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
Isoform_94758_11	chr1	+	2903	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	0	-312	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.736497298245	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTTACCTTGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	93752961	93779758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
Isoform_9476_14	chr2	+	171	1	Intergenic	novelGene_6495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	119023169	119023340	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_119023200_119023300
Isoform_94760_7	chr1	+	2851	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	21	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9625045767704	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGCTTACCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	93753016	93779756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_93753042_93754018_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
Isoform_94761_3	chr1	+	3209	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9625045767704	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATCTCTCCACACATT	NA	False	NA	NA	False	CATAAA	-23	NA	93752968	93780066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_93753042_93754018_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
Isoform_94762_3	chr1	+	3485	10	FSM	ENSMUSG00000073609.10	ENSMUST00000112881.8	3459	10	-32	6	2	-6	multi-exon	FALSE	canonical	2	4	junction_1	13.9761701954911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTACATCTCTCCACACA	NA	False	NA	NA	False	CATAAA	-21	NA	93752963	93780064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_93753303_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
Isoform_94764_3	chr1	+	3170	10	NNC	ENSMUSG00000073609.10	novel	3459	10	NA	NA	0	-311	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	14.4640892054498	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTTACCTTGTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	93752961	93779759	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_93753303_93754018_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
Isoform_94767_12	chr1	+	1224	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	98	790	93	-790	multi-exon	FALSE	canonical	3	133	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTTTATAAAATAAATAC	NA	False	NA	23	True	AATAAA	-36	NA	95241445	95262219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_95241976_95252833_95252969_95261660
Isoform_94769_11	chr1	+	1152	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	34	926	29	-926	multi-exon	FALSE	canonical	3	133	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTCCCGTTTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	95241381	95262083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_95241976_95252833_95252969_95261660
Isoform_94771_6	chr1	+	2082	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	34	-4	29	4	multi-exon	FALSE	canonical	3	133	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTTCTAGTTGCCACAT	NA	False	NA	NA	False	AATAAA	-24	NA	95241381	95263013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_95241976_95252833_95252969_95261660
Isoform_94772_4	chr1	+	3731	3	FSM	ENSMUSG00000097814.6	ENSMUST00000202118.2	410	3	11	-3332	11	-1	multi-exon	FALSE	canonical	3	11	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAATCATCTCTATTATT	NA	False	NA	4	True	NA	NA	NA	96799968	96808958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_96800116_96800209_96800394_96805558
Isoform_94773_6	chr1	+	3549	2	NIC	ENSMUSG00000097814.6	novel	410	3	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCATCTCTATTATTTC	NA	False	NA	6	True	NA	NA	NA	96799968	96808960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_96800116_96805558
Isoform_94776_30	chr1	+	3823	2	FSM	ENSMUSG00000097814.6	ENSMUST00000181489.3	3849	2	23	3	11	-3	multi-exon	FALSE	canonical	3	20	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATAATCATCTCTATTA	NA	False	NA	2	True	NA	NA	NA	96799968	96808956	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_96800394_96805558
Isoform_94778_6	chr1	+	1000	3	FSM	ENSMUSG00000026333.15	ENSMUST00000112842.8	1037	3	-9	46	-2	-46	multi-exon	FALSE	canonical	3	41	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAAAACCAAACAA	NA	False	NA	NA	False	NA	NA	NA	97697894	97705818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_97697981_97703171_97703318_97705050
Isoform_94779_42	chr1	+	1829	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	13	204	6	-204	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATGCGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	97697909	97720490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
Isoform_9478_4	chr10	+	164	1	Intergenic	novelGene_943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	AAAAAG	-29	NA	66688174	66688338	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_66688200_66688300
Isoform_94780_8	chr1	+	1932	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	0	114	0	-114	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGGGTACTACATTTTC	NA	False	NA	NA	False	AATAAA	-28	NA	97697896	97720580	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
Isoform_94782_3	chr1	+	1714	8	NIC	ENSMUSG00000026333.15	novel	2046	8	NA	NA	-2	-116	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	18.8148877222268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATATGGGTACTACATTT	NA	False	NA	NA	False	AATAAA	-26	NA	97697901	97720578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_97697981_97703171_97703318_97705050_97705245_97710862_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
Isoform_94786_292	chr1	+	1609	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	24	77	-2	3	multi-exon	FALSE	canonical	3	512	junction_1	10.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTATGTGTTTGTTTGG	NA	False	NA	8	True	NA	NA	NA	16735457	16748422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_16735730_16737891_16737998_16747191
Isoform_94787_60	chr1	+	1700	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	9	1	9	-1	multi-exon	FALSE	canonical	3	512	junction_1	10.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTGTTTTGTTTGCCT	NA	False	NA	21	True	ATTAAA	-11	NA	16735442	16748498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_16735730_16737891_16737998_16747191
Isoform_94793_49	chr1	+	915	2	FSM	ENSMUSG00000026319.14	ENSMUST00000191150.2	874	2	-45	4	9	-4	multi-exon	FALSE	canonical	3	51	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATGTGTCTGCTTCA	NA	False	NA	7	True	AATAAA	-9	NA	105591616	105592871	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_105592359_105592698
Isoform_94795_10	chr1	+	4938	5	ISM	ENSMUSG00000026319.14	ENSMUST00000191293.7	5109	22	-568	47257	-10	4099	5prime_fragment	FALSE	canonical	3	95	junction_1	9.12071817347735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105591597	105618965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006
Isoform_94797_118	chr1	+	5365	29	FSM	ENSMUSG00000026319.14	ENSMUST00000039173.13	4328	29	9	-1046	9	-65	multi-exon	FALSE	canonical	3	86	junction_7	18.9304244376019	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	18	True	AATAAA	-18	NA	105591616	105682846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
Isoform_94798_15	chr1	+	4349	29	FSM	ENSMUSG00000026319.14	ENSMUST00000039173.13	4328	29	-20	-1	2	1	multi-exon	FALSE	canonical	3	86	junction_7	18.9304244376019	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAATGCAGACTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	105591587	105681801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
Isoform_94799_7	chr1	+	5441	29	FSM	ENSMUSG00000026319.14	ENSMUST00000039173.13	4328	29	3	-1116	3	0	multi-exon	FALSE	canonical	3	86	junction_7	18.9304244376019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTTTAGAAATCTAATC	NA	False	NA	88	True	AATAAA	-18	NA	105591610	105682916	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
Isoform_9480_16	chr10	-	209	1	Intergenic	novelGene_944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAGAAATAAATCTTG	NA	False	NA	NA	False	GATAAA	-10	NA	66708889	66708680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_66708700_66708900
Isoform_94800_3	chr1	+	5436	29	FSM	ENSMUSG00000026319.14	ENSMUST00000086721.10	5414	29	-25	3	5	2	multi-exon	FALSE	canonical	2	6	junction_22	32.829491470385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACATTTTAGAAATCTA	NA	False	NA	85	True	AATAAA	-15	NA	105591612	105682913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668737_105668821_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
Isoform_94801_3	chr1	+	5372	29	FSM	ENSMUSG00000026319.14	ENSMUST00000086721.10	5414	29	-30	72	0	-67	multi-exon	FALSE	canonical	2	6	junction_22	32.829491470385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTGTGTATTTTGTT	NA	False	NA	16	True	AATAAA	-16	NA	105591607	105682844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668737_105668821_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
Isoform_94802_29	chr1	+	5356	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	9	-65	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	26.82273631965	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	18	True	AATAAA	-18	NA	105591616	105682846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
Isoform_94803_4	chr1	+	5451	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	26.82273631965	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACATTTTAGAAATCT	NA	False	NA	84	True	AATAAA	-14	NA	105591587	105682912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
Isoform_94804_5	chr1	+	620	5	FSM	ENSMUSG00000025779.11	ENSMUST00000026881.11	632	5	12	0	12	0	multi-exon	FALSE	canonical	2	6	junction_2	0.707106781186548	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTCTGTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	16758668	16779835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_16758844_16761907_16761998_16771018_16771148_16776396_16776450_16779662
Isoform_94807_14	chr1	+	6386	13	NIC	ENSMUSG00000038866.16	novel	6368	13	NA	NA	-2	1	intron_retention	FALSE	canonical	3	22	junction_11	16.9016764454496	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAGAATTATGCCTTAT	NA	False	NA	10	True	AATAAA	-14	NA	105918416	105961798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481
Isoform_94808_4	chr1	+	5747	14	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	39	-18	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	17.8706728117763	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGAAAAACAG	NA	False	NA	-9	True	NA	NA	NA	105918174	105961779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481_105958964_105959825
Isoform_94810_22	chr1	+	6376	13	FSM	ENSMUSG00000038866.16	ENSMUST00000119166.8	6368	13	-7	-1	-7	1	multi-exon	FALSE	canonical	3	40	junction_3	12.1609575646365	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAGAATTATGCCTTAT	NA	False	NA	10	True	AATAAA	-14	NA	105918411	105961798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
Isoform_94811_11	chr1	+	6610	13	FSM	ENSMUSG00000038866.16	ENSMUST00000119166.8	6368	13	-238	-4	45	-3	multi-exon	FALSE	canonical	3	40	junction_3	12.1609575646365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATTATGCCTTATTGC	NA	False	NA	13	True	AATAAA	-17	NA	105918180	105961801	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
Isoform_94814_5	chr1	+	6302	12	NIC	ENSMUSG00000038866.16	novel	6368	13	NA	NA	-24	-18	intron_retention	FALSE	canonical	3	10	junction_3	19.1988291654026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGAAAAACAG	NA	False	NA	-9	True	NA	NA	NA	105918394	105961779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
Isoform_94815_4	chr1	+	6545	12	NIC	ENSMUSG00000038866.16	novel	6368	13	NA	NA	16	-18	intron_retention	FALSE	canonical	3	10	junction_3	19.1988291654026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGAAAAACAG	NA	False	NA	-9	True	NA	NA	NA	105918151	105961779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
Isoform_94816_7	chr1	+	5433	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	-17	-18	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	20.013016597538	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGAAAAACAG	NA	False	NA	-9	True	NA	NA	NA	105918401	105961779	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
Isoform_94817_3	chr1	+	5682	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	44	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	20.013016597538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGCCTTATTGCAAGTT	NA	False	NA	18	True	AATAAA	-22	NA	105918179	105961806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
Isoform_94818_22	chr1	+	6215	17	FSM	ENSMUSG00000044340.8	ENSMUST00000061047.7	6226	17	4	7	4	-7	multi-exon	FALSE	canonical	3	23	junction_9	5.5589876551401	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATCTATCTGCTTTT	NA	False	NA	16	True	AATAAA	-16	NA	106099485	106321973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106308047_106308153_106314056_106314252_106317403_106317633_106319858
Isoform_94819_20	chr1	+	6285	17	FSM	ENSMUSG00000044340.8	ENSMUST00000061047.7	6226	17	-65	6	-65	-6	multi-exon	TRUE	canonical	3	23	junction_9	5.5589876551401	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAATCTATCTGCTTTTG	NA	False	NA	17	True	AATAAA	-17	NA	106099416	106321974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106308047_106308153_106314056_106314252_106317403_106317633_106319858
Isoform_94820_81	chr1	+	1890	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	9	-10	-6	10	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTAAATTTATTTAT	NA	False	NA	16	True	NA	NA	NA	118249577	118261562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
Isoform_94821_235	chr1	+	1648	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	9	232	-6	-232	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTTCCTTTTTGTCCA	NA	False	NA	24	True	AATATA	-18	NA	118249577	118261320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
Isoform_94822_243	chr1	+	1623	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	34	232	19	-232	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTTCCTTTTTGTCCA	NA	False	NA	24	True	AATATA	-18	NA	118249602	118261320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
Isoform_94823_86	chr1	+	1863	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	34	-8	19	8	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTTTAAATTTATTT	NA	False	NA	14	True	NA	NA	NA	118249602	118261560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
Isoform_94826_7	chr1	+	7201	37	FSM	ENSMUSG00000064302.14	ENSMUST00000178710.8	7566	37	392	-27	4	2	multi-exon	FALSE	canonical	0	0	junction_25	60.1851310541067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTTTTGAGTTTTTCCT	NA	False	NA	5	True	NA	NA	NA	118317179	118537189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
Isoform_94828_4	chr1	+	5456	36	NIC	ENSMUSG00000064302.14	novel	7566	37	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	43.3379317288056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGACAATTCTTAATGC	NA	False	NA	0	True	AATAAA	-11	NA	118317176	118535465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
Isoform_94829_3	chr1	+	6826	34	NIC	ENSMUSG00000064302.14	novel	7207	37	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	44.0087227350178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGAGTTTTTC	NA	False	NA	3	True	NA	NA	NA	118387328	118537187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
Isoform_9483_4	chr10	+	177	1	Intergenic	novelGene_946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	66740106	66740283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_66740100_66740300
Isoform_9484_3	chr10	-	1593	1	Genic_Genomic	ENSMUSG00000097134.3	novel	NA	NA	NA	NA	3956	298	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTATTCTATTTCTT	NA	False	NA	-3	True	AATAAA	-16	NA	66749562	66747969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_66748000_66749600
Isoform_94844_1364	chr1	+	9225	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	472.572421257666	1364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATGTGGCTGGAACCT	NA	False	NA	13	True	AATAAA	-14	NA	118555676	118612892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117_118609404_118609440
Isoform_94863_8	chr1	+	1716	2	FSM	ENSMUSG00000098923.2	ENSMUST00000183607.2	681	2	-40	-995	-27	-759	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTGTGAAGATAT	NA	False	NA	33	True	NA	NA	NA	119453862	119455954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_119454278_119454653
Isoform_94865_16	chr1	+	502	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	-21	7	-13	-7	multi-exon	FALSE	canonical	3	34	junction_1	7.2773621594641	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCTTGGTTTGATTT	NA	False	NA	8	True	AATAAA	-9	NA	120048903	120115912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
Isoform_94866_3	chr1	+	531	6	NNC	ENSMUSG00000026388.16	novel	488	6	NA	NA	-13	3216	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	18.5515498004884	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCACTTGCTGAGCAT	NA	False	NA	NA	False	AATAAA	-21	NA	120048903	120104512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120104341
Isoform_94867_4	chr1	+	2096	2	FSM	ENSMUSG00000036907.12	ENSMUST00000037286.12	1999	2	-98	1	-98	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCGGCTCCTGCTCTTT	6793	False	NA	NA	False	ATTAAA	-13	NA	120268213	120270902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_120269531_120270123
Isoform_94868_64	chr1	+	2377	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	29	4868	3	4	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTGAGCAACTGCTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	121358806	121429321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
Isoform_94869_58	chr1	+	7244	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	29	1	3	-1	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGTTTCATTTAAGAAT	NA	False	NA	9	True	NA	NA	NA	121358806	121434188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
Isoform_9487_198	chr11	-	181	1	Intergenic	novelGene_1644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68055856	68055675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_68055700_68055900
Isoform_94871_6	chr1	+	2373	24	FSM	ENSMUSG00000026339.19	ENSMUST00000112621.2	2338	24	-31	-4	4	4	multi-exon	FALSE	canonical	2	9	junction_9	17.1308761805856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTGAGCAACTGCTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	121358807	121429321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389964_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
Isoform_94874_4	chr1	+	2746	16	NIC	ENSMUSG00000026342.11	novel	756	6	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	24.987107786928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTAAGCGATGACAT	NA	False	NA	NA	False	TTTAAA	-41	NA	125488272	125523557	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_125488555_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
Isoform_94877_94	chr1	+	2647	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	-6	92	-6	-92	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGGTGCTGCTTCCTT	NA	False	NA	NA	False	TATAAA	-18	NA	125488746	125523465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
Isoform_94878_44	chr1	+	2741	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	16	-24	16	24	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTGTCCTATCATTA	NA	False	NA	NA	False	NA	NA	NA	125488768	125523581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
Isoform_9488_75	chr10	+	246	1	Intergenic	novelGene_947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTAATGTGTGGAGA	NA	False	NA	NA	False	NA	NA	NA	66915389	66915635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_66915400_66915600
Isoform_94882_4	chr1	+	3092	6	ISM	ENSMUSG00000036155.14	ENSMUST00000038361.11	8436	18	-5	119929	-2	-19805	5prime_fragment	FALSE	canonical	0	0	junction_2	2.41660919471891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127132749	127296144	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_127133165_127177526_127177577_127234370_127234754_127248340_127248503_127292884_127292962_127294139
Isoform_94883_3	chr1	+	3865	18	FSM	ENSMUSG00000036155.14	ENSMUST00000038361.11	8436	18	-37	4608	-34	24	multi-exon	FALSE	canonical	0	0	junction_2	2.16930457818656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCTGCTTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	127132717	127411465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127133165_127177526_127177577_127234370_127234754_127248340_127248503_127292884_127292962_127294139_127294230_127310657_127310730_127312504_127312667_127315079_127315250_127318480_127318616_127325243_127325378_127339863_127339998_127373978_127374129_127387572_127387720_127396928_127397046_127399237_127399313_127407201_127407360_127410263
Isoform_94885_22	chr1	+	2851	4	FSM	ENSMUSG00000026349.15	ENSMUST00000125760.8	665	4	28	-2214	28	3	multi-exon	FALSE	canonical	3	495	junction_3	16.8193010820572	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127701928	127723540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094
Isoform_94886_39	chr1	+	1005	5	FSM	ENSMUSG00000026349.15	ENSMUST00000149760.8	1040	5	38	-3	38	3	multi-exon	FALSE	canonical	3	475	junction_4	23.7539470404394	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127701938	127723540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991
Isoform_9489_57	chr10	+	210	1	Intergenic	novelGene_948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCCCAACCTGCAATGT	NA	False	NA	NA	False	AAAAAG	-11	NA	66918853	66919063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_66918900_66919100
Isoform_94893_104	chr1	+	4570	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	40	2128	40	1	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701940	127733670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
Isoform_94895_59	chr1	+	6695	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	40	3	40	-3	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCAAGGCTGAAACATG	NA	False	NA	5	True	AATAAA	-19	NA	127701940	127735795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
Isoform_94902_61	chr1	+	4466	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	46	-1	46	1	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701946	127733670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
Isoform_94904_27	chr1	+	6585	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	53	-2127	53	-2	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCAAGGCTGAAACATGT	NA	False	NA	6	True	AATAAA	-20	NA	127701953	127735796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
Isoform_9491_22	chr10	+	172	1	Intergenic	novelGene_949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTTAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67048096	67048268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_67048100_67048300
Isoform_94912_9	chr1	+	6993	9	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	52	-3	intron_retention	FALSE	canonical	3	50	junction_6	145.842166399159	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCAAGGCTGAAACATG	NA	False	NA	5	True	AATAAA	-19	NA	127701952	127735795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898
Isoform_9492_35	chr10	+	173	1	Intergenic	novelGene_721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTTGTT	NA	False	NA	NA	False	NA	NA	NA	8358343	8358516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_8358300_8358500
Isoform_9493_32	chr10	-	178	1	Intergenic	novelGene_950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67122010	67121832	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_67121800_67122000
Isoform_94932_5	chr1	+	4790	23	ISM	ENSMUSG00000036104.13	ENSMUST00000212506.2	2967	25	-29	1410	-6	-1410	5prime_fragment	FALSE	canonical	3	104	junction_1	18.0360635055674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTTTGGGTATGTACT	3039	False	NA	NA	False	AATAAA	-15	NA	127796519	127868937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782
Isoform_94934_263	chr1	+	4211	24	FSM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	30	2	1	-2	multi-exon	FALSE	canonical	3	104	junction_1	17.6995509005001	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3059	False	NA	16	True	AATAAA	-13	NA	127796539	127871603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
Isoform_9494_3	chr10	-	207	1	Intergenic	novelGene_951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACACCCAACCTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	67122338	67122131	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_67122100_67122300
Isoform_94941_7	chr1	+	4762	26	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	77.3029986481766	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031051	128165473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_94942_26	chr1	+	4625	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	65.5311630702014	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031086	128165473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_94947_35	chr1	+	4591	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_14	61.9559515345827	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031083	128165472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_94948_59	chr1	+	4489	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_12	40.7907195049507	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031083	128165472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_94949_30	chr1	+	4524	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_12	40.7907195049507	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031049	128165473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_94951_18	chr1	+	4236	23	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_12	53.173581335717	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031080	128165471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_94952_38	chr1	+	4643	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_14	56.9085371207363	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031079	128165472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_94953_24	chr1	+	4679	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_14	56.9085371207363	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031044	128165473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_94954_262	chr1	+	4538	24	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_12	31.0798106715592	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031083	128165473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_94959_7	chr1	+	4675	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	67.1256595250033	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031079	128165473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_9497_51	chr10	-	4585	2	Genic_Genomic	ENSMUSG00000057134.7	novel	4558	1	NA	NA	-54	-7	multi-exon	TRUE	non_canonical	3	148	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACGTAGAAATAATG	NA	False	NA	NA	False	AATAAA	-10	NA	67384952	67380347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_67382789_67382808
Isoform_94979_93	chr1	+	3968	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	142	3	142	-3	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCCTGCATTTTGCTCTT	236	False	NA	NA	False	NA	NA	NA	128172040	128207112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
Isoform_94988_3	chr1	+	2913	4	FSM	ENSMUSG00000042510.8	ENSMUST00000039323.8	2909	4	-6	2	-6	-1	multi-exon	FALSE	canonical	1	1	junction_2	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGAGTCCCTGTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	130659706	130672357	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_130659961_130665238_130665425_130668739_130668921_130670065
Isoform_94990_80	chr1	+	2199	14	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	32	731	32	-2	5prime_fragment	FALSE	canonical	3	546	junction_5	45.0821734931215	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTGTTTTGCTTGCAT	NA	False	NA	23	True	ATTAAA	-16	NA	131080949	131099245	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
Isoform_94993_27	chr1	+	2118	15	FSM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	32	3	32	-3	multi-exon	FALSE	canonical	3	28	junction_14	169.094301066184	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGCCTTTGTGTCTTA	NA	False	NA	NA	False	AGTAAA	-21	NA	131080949	131099973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131099657
Isoform_94994_1504	chr1	+	1939	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	68	2	68	-2	multi-exon	FALSE	canonical	3	546	junction_5	43.4650340351123	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTTATTTCTAATCTA	NA	False	NA	39	True	AATAAA	-20	NA	131080985	131101213	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
Isoform_95_31	ERCC-00084	+	977	1	FSM	ERCC-00084A	DQ883682	978	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	978	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00084_+_0_1000
Isoform_9500_181	chr10	-	3972	2	Genic_Genomic	ENSMUSG00000057134.7	novel	4558	1	NA	NA	-54	-620	multi-exon	FALSE	non_canonical	3	148	junction_1	0	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACGCTGTCTGTCTGT	NA	False	NA	-3	True	AATAAA	-20	NA	67384952	67380960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_67382789_67382808
Isoform_95003_40	chr1	+	1396	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	-42	837	-42	-837	multi-exon	FALSE	canonical	3	32	junction_2	3.29983164553722	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAACGTTTACTGTTTTA	NA	False	NA	13	True	AGTAAA	-26	NA	131455598	131466773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
Isoform_95004_12	chr1	+	3148	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	-50	2232	-50	-1637	multi-exon	FALSE	canonical	3	9	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTGTTTTGTGTTCT	9050	False	NA	NA	False	AATATA	-13	NA	20960779	21007642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_20960911_21002283_21002464_21004805
Isoform_95005_5	chr1	+	4472	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	-36	894	-36	-299	multi-exon	FALSE	canonical	3	9	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTCTCATGAATAAGAT	9064	False	NA	NA	False	ATTAAA	-15	NA	20960793	21008980	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_20960911_21002283_21002464_21004805
Isoform_95006_5	chr1	+	4774	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	-35	591	-35	4	multi-exon	FALSE	canonical	3	9	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGTCAGGGTTACAAT	9065	False	NA	NA	False	AATAAA	-19	NA	20960794	21009283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_20960911_21002283_21002464_21004805
Isoform_95007_5	chr1	+	5360	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	-35	5	-35	-5	multi-exon	FALSE	canonical	3	9	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATTTTGGCCTACATTA	9065	False	NA	NA	False	ATTAAA	-16	NA	20960794	21009869	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_20960911_21002283_21002464_21004805
Isoform_95008_117	chr1	+	3532	13	FSM	ENSMUSG00000042251.13	ENSMUST00000112393.9	6900	13	21	3347	4	1738	multi-exon	FALSE	canonical	3	56	junction_3	6.31741420378799	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725139	131745852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
Isoform_95010_3	chr1	+	3392	11	NIC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	3	1738	intron_retention	FALSE	canonical	0	0	junction_7	20.743432695675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725138	131745852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131734636_131734709_131739772_131739942_131741628_131741729_131743724
Isoform_95011_3	chr1	+	3296	12	NIC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	7	1738	intron_retention	FALSE	canonical	1	1	junction_2	20.1305655514565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725142	131745852	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_131725325_131726333_131726421_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
Isoform_95015_189	chr1	+	4657	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	37	3	37	-3	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTATCCCTGTGTG	5239	False	NA	20	True	AATAAA	-17	NA	131755751	131776600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
Isoform_95021_48	chr1	+	4701	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	-7	3	-7	-3	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTATCCCTGTGTG	5195	False	NA	20	True	AATAAA	-17	NA	131755707	131776600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
Isoform_95032_12	chr1	+	1199	6	FSM	ENSMUSG00000026433.14	ENSMUST00000027693.8	1226	6	26	1	26	-1	multi-exon	FALSE	canonical	3	23	junction_1	27.6506781110337	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGGTTGTGATGCTGG	NA	False	NA	14	True	ATTAAA	-16	NA	131795003	131800624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131795149_131795256_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
Isoform_95033_49	chr1	+	1307	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	42	-147	26	-1	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGGTTGTGATGCTGG	NA	False	NA	14	True	ATTAAA	-16	NA	131795003	131800624	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
Isoform_95035_4	chr1	+	1366	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	-19	-145	-19	-3	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGGGTTGTGATGCT	NA	False	NA	12	True	ATTAAA	-14	NA	131794942	131800622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
Isoform_95047_606	chr1	+	6052	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-56	2	-34	-2	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGTGTGCTTCGTGTGC	9248	False	NA	25	True	TATAAA	-16	NA	131838237	131864057	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
Isoform_95068_166	chr1	+	6021	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	-4	-3642	-4	0	multi-exon	FALSE	canonical	3	331	junction_5	461.648284832608	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9278	False	NA	27	True	TATAAA	-18	NA	131838267	131864059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
Isoform_95089_66	chr1	+	3228	5	FSM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	-16	0	-16	0	multi-exon	FALSE	canonical	3	24	junction_4	4.65698400254929	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGTCTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	131890688	131910707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485_131906752_131909028
Isoform_95092_3	chr1	+	3185	5	NIC	ENSMUSG00000026435.16	novel	3212	5	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	12.3895116933639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTTTGTCTTTTCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	131890688	131910706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_131890791_131904455_131904851_131905192_131905937_131906485_131906752_131909028
Isoform_95093_7	chr1	+	3520	4	NIC	ENSMUSG00000026435.16	novel	3212	5	NA	NA	-8	0	intron_retention	FALSE	canonical	3	24	junction_3	2.94392028877595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGTCTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	131890696	131910707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_131890791_131904455_131905937_131906485_131906752_131909028
Isoform_95097_5	chr1	+	2441	7	NNC	ENSMUSG00000026436.16	novel	1586	6	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	5.87130498460285	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTTGGAGTGATTAT	13	False	NA	NA	False	AATAAA	-12	NA	131935314	131960347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_131935679_131942120_131942337_131945330_131946201_131947087_131947205_131951290_131951577_131959301_131959364_131959821
Isoform_95098_30	chr1	+	2215	11	FSM	ENSMUSG00000041809.6	ENSMUST00000038447.6	2146	11	-70	1	-8	-1	multi-exon	FALSE	canonical	3	9	junction_5	4.06939798987516	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTGCCTTATTTGGA	NA	False	NA	11	True	NA	NA	NA	21021841	21061064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
Isoform_9510_11	chr10	-	187	1	Intergenic	novelGene_952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTTAAAGGAATAACTG	5813	False	NA	NA	False	NA	NA	NA	67906839	67906652	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_67906700_67906800
Isoform_95100_65	chr1	+	2895	7	FSM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	13	199	13	-4	multi-exon	FALSE	canonical	3	25	junction_6	6.54896090146283	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTCTCTTGTTCACT	NA	False	NA	NA	False	ATTAAA	-20	NA	132243876	132261027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_132244211_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
Isoform_95104_38	chr1	+	6048	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	4	230	4	-230	multi-exon	FALSE	canonical	3	42	junction_10	4.74561200830128	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGCCGCTATACCCTC	2929	False	NA	NA	False	AATAAA	-30	NA	132345296	132394466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
Isoform_95107_6	chr1	+	6419	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	-137	0	-137	0	multi-exon	TRUE	canonical	3	42	junction_10	4.74561200830128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCCTGTTTGGCTT	2788	False	NA	12	True	AATAAA	-17	NA	132345155	132394696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
Isoform_95110_16	chr1	+	6147	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	-98	233	-98	-233	multi-exon	FALSE	canonical	3	42	junction_10	4.74561200830128	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTTAGCCGCTATACC	2827	False	NA	NA	False	AATAAA	-27	NA	132345194	132394463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
Isoform_95111_21	chr1	+	3351	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	94.1666657939292	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACAAGTATACATGCTT	NA	False	NA	7	True	AATAAA	-16	NA	132405146	132433395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
Isoform_95114_12	chr1	+	3493	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	114.801397843169	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCACAAGTATACATGC	NA	False	NA	5	True	AATAAA	-14	NA	132405116	132433393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
Isoform_95115_28	chr1	+	6478	14	Fusion	ENSMUSG00000026439.15_ENSMUSG00000048174.3	novel	3385	15	NA	NA	12	-2	intron_retention	FALSE	canonical	3	277	junction_4	39.7596328248497	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATGGCAGTCTAACC	NA	False	NA	4	True	AATAAA	-14	NA	132405116	132436375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
Isoform_95116_416	chr1	+	3510	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	10	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCTTGTTTGTAAACAC	NA	False	NA	19	True	AATAAA	-28	NA	132405116	132433407	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
Isoform_95120_21	chr1	+	3760	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-241	5	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATACATGCTTGTTTGTA	NA	False	NA	14	True	AATAAA	-23	NA	132404861	132433402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
Isoform_95123_77	chr1	+	3611	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	12	-767	12	1	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405116	132433394	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
Isoform_95139_16	chr1	+	3386	2	FSM	ENSMUSG00000026443.4	ENSMUST00000027706.4	3428	2	28	14	28	-14	multi-exon	FALSE	canonical	3	16	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGAGAAGATGATCCTT	NA	False	NA	8	True	AATAAA	-21	NA	132808038	132867729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_132808414_132864718
Isoform_95140_53	chr1	+	3326	2	FSM	ENSMUSG00000026443.4	ENSMUST00000027706.4	3428	2	84	18	2	-18	multi-exon	FALSE	canonical	3	16	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTGGGGAGAAGATGAT	NA	False	NA	4	True	AATAAA	-17	NA	132808094	132867725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_132808414_132864718
Isoform_95143_3	chr1	+	3486	2	FSM	ENSMUSG00000026443.4	ENSMUST00000027706.4	3428	2	-71	13	-71	-13	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGAGAAGATGATCCTTT	NA	False	NA	9	True	AATAAA	-22	NA	132807939	132867730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_132808414_132864718
Isoform_95145_24	chr1	+	3751	2	FSM	ENSMUSG00000046062.6	ENSMUST00000122956.2	3688	2	-65	2	-65	-2	multi-exon	FALSE	canonical	3	18	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTATGTGACTTTATGT	5703	False	NA	13	True	AATAAA	-18	NA	133059016	133067519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_133059649_133064400
Isoform_95150_573	chr1	+	5456	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	136	2	-65	-2	multi-exon	FALSE	canonical	3	372	junction_1	0	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTATGTGACTTTATGT	5703	False	NA	13	True	AATAAA	-18	NA	133059016	133067519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_133061354_133064400
Isoform_95154_20	chr1	+	2720	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	87	2787	87	-2787	multi-exon	FALSE	canonical	3	372	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTTTGATTATTTTT	5654	False	NA	19	True	AAGAAA	-16	NA	133058967	133064734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_133061354_133064400
Isoform_95155_109	chr1	+	5479	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	112	3	-89	-3	multi-exon	FALSE	canonical	3	372	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTATGTGACTTTATG	5679	False	NA	12	True	AATAAA	-17	NA	133058992	133067518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_133061354_133064400
Isoform_95162_13	chr1	+	5645	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	-51	0	-51	0	multi-exon	FALSE	canonical	3	372	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGACTTTATGTAT	5516	False	NA	15	True	AATAAA	-20	NA	133058829	133067521	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_133061354_133064400
Isoform_95186_3	chr1	+	819	4	ISM	ENSMUSG00000103421.2	ENSMUST00000094557.7	1865	5	9330	1085	9240	891	3prime_fragment	FALSE	canonical	1	1	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAGATTTGGCGTTGA	772	False	NA	NA	False	ATTAAA	-18	NA	133246867	133249679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_133247111_133247890_133248070_133248728_133248793_133249346
Isoform_95187_7	chr1	+	656	3	FSM	ENSMUSG00000115958.2	ENSMUST00000195286.5	656	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	17.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	5608	False	NA	4	True	AATAAA	-16	NA	133251703	133257460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_133251787_133254872_133255079_133257093
Isoform_95188_14	chr1	+	581	3	NIC	ENSMUSG00000115958.2	novel	656	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	18	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	5608	False	NA	4	True	AATAAA	-16	NA	133251703	133257460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_133251787_133254947_133255079_133257093
Isoform_95189_6	chr1	+	450	2	NIC	ENSMUSG00000115958.2	novel	656	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	5608	False	NA	4	True	AATAAA	-16	NA	133251703	133257460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_133251787_133257093
Isoform_95190_5	chr1	+	650	2	FSM	ENSMUSG00000116158.2	ENSMUST00000178033.5	496	2	-154	0	-154	0	multi-exon	FALSE	canonical	3	48	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	8700	False	NA	4	True	AATAAA	-16	NA	133254795	133257460	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_133255079_133257093
Isoform_95191_174	chr1	+	2280	8	FSM	ENSMUSG00000070644.14	ENSMUST00000135222.9	2297	8	-2	19	-2	1	multi-exon	FALSE	canonical	3	61	junction_5	9.79379228628721	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGGTCTTGGAAGGACAG	NA	False	NA	6	True	ATTAAA	-16	NA	133291307	133308055	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_133291757_133293313_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
Isoform_95196_5	chr1	+	2204	7	NIC	ENSMUSG00000070644.14	novel	2297	8	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.0555024431212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACGGTCTTGGAAGGAC	NA	False	NA	4	True	ATTAAA	-14	NA	133291307	133308053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_133291757_133293313_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133307054
Isoform_95197_4	chr1	+	1084	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027064.8	1261	5	178	-1	178	1	multi-exon	FALSE	canonical	3	9	junction_4	35.5984550226551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCTCATTCATTTCT	NA	False	NA	15	True	AATAAA	-15	NA	21289063	21300389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299631
Isoform_95198_19	chr1	+	907	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	259	2	172	1	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCTCATTCATTTCT	NA	False	NA	15	True	AATAAA	-15	NA	21289057	21300389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
Isoform_95200_16	chr1	+	1151	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	16	1	16	-1	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCTCATTCATTTCTA	NA	False	NA	16	True	AATAAA	-16	NA	21288814	21300390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
Isoform_95202_3	chr1	+	1841	11	NNC	ENSMUSG00000042451.13	novel	1828	11	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2.60959767013998	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGTTTCTGTGGCAATG	9936	False	NA	NA	False	AATAAA	-19	NA	134121176	134128974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_134121465_134121551_134121687_134122314_134122483_134124707_134124796_134125088_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687_134127875_134128132_134128186_134128685
Isoform_95203_13	chr1	+	2513	8	ISM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	217	4	3	-4	intron_retention	FALSE	canonical	3	35	junction_5	138.679192265267	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGAATCATTGTCGTCG	8188	False	NA	35	True	AATAAA	-23	NA	134333735	134339470	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230
Isoform_95204_44	chr1	+	2202	9	FSM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	217	1	3	-1	multi-exon	TRUE	canonical	3	35	junction_5	130.869925880624	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATCATTGTCGTCGTGT	8188	False	NA	38	True	AATAAA	-26	NA	134333735	134339473	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230_134338331_134338644
Isoform_95206_18	chr1	+	1935	8	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	206	10	-8	-6	intron_retention	TRUE	canonical	3	291	junction_1	56.9597064885811	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGGAATCATTGTCGT	8177	False	NA	33	True	AATAAA	-21	NA	134333724	134339468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230
Isoform_95207_419	chr1	+	1619	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	217	1	3	-1	multi-exon	FALSE	canonical	3	291	junction_1	53.3666562565053	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTGTCGTCGTGTCTGG	8188	False	NA	42	True	AATAAA	-30	NA	134333735	134339477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
Isoform_95217_95	chr1	+	1835	8	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	8	-2	intron_retention	FALSE	canonical	3	337	junction_4	39.0227563122351	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCATTGTCGTCGTG	8226	False	NA	37	True	AATAAA	-25	NA	134333773	134339472	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
Isoform_95220_8	chr1	+	3276	6	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	337	junction_4	44.6793016955279	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTGTCGTCGTGTCTGG	8217	False	NA	42	True	AATAAA	-30	NA	134333764	134339477	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134337425_134338230
Isoform_95223_1787	chr1	+	2088	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	20	1015	20	-1012	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTTGGCATTCAAAGAGT	NA	False	NA	7	True	AATAAA	-15	NA	134343135	134360074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
Isoform_95224_94	chr1	+	2110	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	-2	1015	-2	-1012	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTTGGCATTCAAAGAGT	NA	False	NA	7	True	AATAAA	-15	NA	134343113	134360074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
Isoform_95225_148	chr1	+	3059	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	62	2	-16	1	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATGTCTTGGTTCCAT	NA	False	NA	6	True	NA	NA	NA	134343177	134361087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
Isoform_95236_173	chr1	+	2146	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	288	1012	180	-1012	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTTGGCATTCAAAGAGT	NA	False	NA	7	True	AATAAA	-15	NA	134343481	134360074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
Isoform_95249_9	chr1	+	3357	12	Fusion	ENSMUSG00000026455.15_ENSMUSG00000101061.2	novel	937	3	NA	NA	10	-4	multi-exon	TRUE	canonical	3	12	junction_1	47.209573199224	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTTTAAGAGAATTTG	NA	False	NA	13	True	ATTAAA	-14	NA	134363375	134418607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_+_134363609_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_95251_140	chr1	+	3295	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	-23	5	1	-5	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCTTTAAGAGAATTT	NA	False	NA	12	True	ATTAAA	-13	NA	134383269	134418606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_95252_12	chr1	+	3440	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	-17	-146	7	1	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTGGATTTATTGTC	NA	False	NA	NA	False	NA	NA	NA	134383275	134418757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_95253_290	chr1	+	3263	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	2	143	2	2	multi-exon	FALSE	canonical	3	104	junction_1	24.9889231659096	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAGAATTTGTGGGTA	NA	False	NA	19	True	ATTAAA	-20	NA	134383270	134418613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_95254_9	chr1	+	3401	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	8	-1	8	1	multi-exon	FALSE	canonical	3	104	junction_1	24.9889231659096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTGGATTTATTGTC	NA	False	NA	NA	False	NA	NA	NA	134383276	134418757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_95255_8	chr1	+	3176	12	NIC	ENSMUSG00000026455.15	novel	3220	12	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	48.4638401455445	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTTTAAGAGAATTTG	NA	False	NA	13	True	ATTAAA	-14	NA	134383270	134418607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416753_134416860_134417069
Isoform_95261_909	chr1	+	1973	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	-3	891	-3	-891	multi-exon	FALSE	canonical	3	479	junction_1	0	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCATCTGTTTTCT	6635	False	NA	NA	False	NA	NA	NA	134422382	134435621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134422548_134433813
Isoform_95262_59	chr1	+	2862	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	-7	6	-7	-6	multi-exon	FALSE	canonical	3	479	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACGGGGCTGGCGAGAT	6631	False	NA	NA	False	ATTAAA	-7	NA	134422378	134436506	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134422548_134433813
Isoform_95263_25	chr1	+	2024	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	-54	891	-54	-891	multi-exon	FALSE	canonical	3	479	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCATCTGTTTTCT	6584	False	NA	NA	False	NA	NA	NA	134422331	134435621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134422548_134433813
Isoform_95280_382	chr1	+	5323	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	54	3337	18	426	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTGTTGGTGCTTTA	6769	False	NA	7	True	ATTAAA	-17	NA	134487962	134559686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_95284_73	chr1	+	6318	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-7	2403	-7	1360	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTGGTCTGCAGTGTC	6708	False	NA	23	True	ATTAAA	-15	NA	134487901	134560620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_95286_367	chr1	+	5567	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	54	3093	18	670	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGACTACAGCTTCTT	6769	False	NA	8	True	AATAAA	-18	NA	134487962	134559930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_95289_155	chr1	+	5628	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-7	3093	-7	670	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGACTACAGCTTCTT	6708	False	NA	8	True	AATAAA	-18	NA	134487901	134559930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_95296_196	chr1	+	6255	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	54	2405	18	1358	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGTGGTCTGCAGTG	6769	False	NA	21	True	ATTAAA	-13	NA	134487962	134560618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_95323_10	chr1	+	1007	5	ISM	ENSMUSG00000025934.16	ENSMUST00000121676.8	894	8	16547	-192	3633	192	3prime_fragment	FALSE	canonical	3	69	junction_1	2	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGAGTATTCGAACATT	NA	False	NA	14	True	AATAAA	-20	NA	21327377	21335437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
Isoform_95391_375	chr1	+	1083	7	FSM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	31	2	5	1	multi-exon	FALSE	canonical	3	373	junction_1	158.492902049272	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTGTTTATATGAAA	NA	False	NA	13	True	AATAAA	-15	NA	134890333	134901898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
Isoform_95394_8	chr1	+	983	6	NIC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	296.487841234679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTGTTTATATGAAAC	NA	False	NA	14	True	AATAAA	-16	NA	134890335	134901899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899843_134899928_134901537
Isoform_95397_5	chr1	+	3310	11	NNC	ENSMUSG00000031506.12	novel	1990	10	NA	NA	-56	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2.45153013442625	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAATTCTTCTTTCCATC	NA	False	NA	NA	False	AATAAA	-26	NA	135060381	135073060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_135060516_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135063914_135065061_135065200_135065505_135065617_135066861_135067017_135069680_135069795_135070898_135072649_135072672
Isoform_95398_4	chr1	+	3332	11	NNC	ENSMUSG00000031506.12	novel	3261	10	NA	NA	-65	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.57681974534503	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAATTCTTCTTTCCATC	NA	False	NA	NA	False	AATAAA	-26	NA	135060372	135073060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_135060529_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135063914_135065061_135065200_135065505_135065617_135066861_135067017_135069680_135069795_135070898_135072649_135072672
Isoform_95399_509	chr1	+	1733	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	-21	1	-21	-1	multi-exon	FALSE	canonical	3	419	junction_3	43.3720980457354	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTGTATGGTGCTGG	NA	False	NA	14	True	AATAAA	-18	NA	135074540	135084006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
Isoform_95402_18	chr1	+	1823	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	-110	0	-110	0	multi-exon	FALSE	canonical	3	419	junction_3	43.3720980457354	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135074451	135084007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
Isoform_95407_14	chr1	+	2076	6	FSM	ENSMUSG00000026421.15	ENSMUST00000097561.9	1828	6	-253	5	-253	-5	multi-exon	FALSE	canonical	3	16	junction_1	177.543684765187	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAACTCTGCTTTCCTGTC	NA	False	NA	19	True	AATAAA	-12	NA	135647545	135679965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135647932_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
Isoform_95408_789	chr1	+	1738	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	80	5	80	-5	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAACTCTGCTTTCCTGTC	NA	False	NA	19	True	AATAAA	-12	NA	135656964	135679965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
Isoform_95409_24	chr1	+	1810	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	11	2	11	-2	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCTTTCCTGTCTGT	NA	False	NA	22	True	AATAAA	-15	NA	135656895	135679968	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
Isoform_95412_1281	chr1	+	1411	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	22	2	22	-2	multi-exon	FALSE	canonical	3	639	junction_1	0	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTCTACTGAGTGAAAT	6767	False	NA	20	True	AATGAA	-27	NA	135693878	135696872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135694633_135696215
Isoform_95417_222	chr1	+	1476	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	-43	2	-43	-2	multi-exon	FALSE	canonical	3	639	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTCTACTGAGTGAAAT	6702	False	NA	20	True	AATGAA	-27	NA	135693813	135696872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135694633_135696215
Isoform_95419_37	chr1	+	1669	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	-236	2	-236	-2	multi-exon	FALSE	canonical	3	639	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTCTACTGAGTGAAAT	6509	False	NA	20	True	AATGAA	-27	NA	135693620	135696872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135694633_135696215
Isoform_9542_3	chr10	-	1973	1	Intergenic	novelGene_722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGTGGTCTCGCTGGTCCT	NA	False	NA	NA	False	NA	NA	NA	8421940	8419967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_8420000_8421900
Isoform_95426_5	chr1	+	948	5	ISM	ENSMUSG00000026418.17	ENSMUST00000148201.8	1150	9	5604	0	380	0	3prime_fragment	FALSE	canonical	3	46	junction_1	20.1912728672563	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	3951	False	NA	43	True	ATTAAA	-24	NA	135733174	135738727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
Isoform_95430_10	chr1	+	776	4	ISM	ENSMUSG00000026418.17	ENSMUST00000148201.8	1150	9	7661	5	2437	-5	3prime_fragment	FALSE	canonical	3	71	junction_1	12.2565175405668	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAATGGTTTCTGTAGC	6008	False	NA	38	True	ATTAAA	-19	NA	135735231	135738722	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_135735349_135736370_135736548_135737363_135737474_135738350
Isoform_95431_24	chr1	+	2909	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	96	-12	96	12	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCGTTCCATACTTTTC	5714	False	NA	NA	False	NA	NA	NA	135746431	135761092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
Isoform_95432_285	chr1	+	2304	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	314	375	314	260	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTGGTAATGTCGATG	5932	False	NA	18	True	NA	NA	NA	135746649	135760705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
Isoform_95433_72	chr1	+	2689	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	312	-8	312	8	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAACTCCGTTCCATACT	5930	False	NA	NA	False	NA	NA	NA	135746647	135761088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
Isoform_95435_128	chr1	+	2526	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	92	375	92	260	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTGGTAATGTCGATG	5710	False	NA	18	True	NA	NA	NA	135746427	135760705	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
Isoform_95437_1356	chr1	+	1424	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	67	315	-28	247	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGCAGATCTCAAGGG	NA	False	NA	21	True	ATTAAA	-16	NA	135945771	135962765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
Isoform_95438_25	chr1	+	782	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	45	979	45	-36	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTGTGATTGGGTCTCT	NA	False	NA	17	True	NA	NA	NA	135945749	135962101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
Isoform_9544_4	chr10	+	2355	1	Intergenic	novelGene_953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGCGAATCAAGGTAGAG	1876	False	NA	NA	False	NA	NA	NA	67983671	67986026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_67983700_67986000
Isoform_95440_30	chr1	+	1570	6	FSM	ENSMUSG00000026411.18	ENSMUST00000117950.2	847	6	12	-735	12	247	multi-exon	FALSE	canonical	2	15	junction_1	164.577519728546	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGCAGATCTCAAGGG	NA	False	NA	21	True	ATTAAA	-16	NA	135945811	135962765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135945987_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
Isoform_95445_13	chr1	+	2534	14	ISM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	10	23572	10	4433	5prime_fragment	FALSE	canonical	3	43	junction_3	9.2946507489189	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTCTGCTACTTTT	6184	False	NA	NA	False	AAAAAG	-15	NA	136059136	136082164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841
Isoform_95446_18	chr1	+	5860	35	FSM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	10	3245	10	2454	multi-exon	FALSE	canonical	3	43	junction_3	11.0094328853373	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAACTGACTTGAAGTT	6184	False	NA	34	True	AATATA	-35	NA	136059136	136102491	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
Isoform_95447_17	chr1	+	9116	35	FSM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	2	-3	2	3	multi-exon	FALSE	canonical	3	43	junction_3	11.0094328853373	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGCTAGTGGGTTGGT	6176	False	NA	6	True	AATAAA	-16	NA	136059128	136105739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
Isoform_95448_11	chr1	+	5836	34	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	2	2461	combination_of_known_splicesites	FALSE	canonical	3	14	junction_27	14.2043333317495	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGAAGTTTCTTCCC	6176	False	NA	41	True	AATATA	-42	NA	136059128	136102498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
Isoform_95449_5	chr1	+	9066	34	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_27	14.2043333317495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGTGGCTAGTGGGTTG	6185	False	NA	4	True	AATAAA	-14	NA	136059137	136105737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
Isoform_9545_5	chr10	-	902	1	Intergenic	novelGene_724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	8425426	8424524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_8424500_8425400
Isoform_95451_6	chr1	+	5876	35	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	1	2458	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	14.7554752022057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGACTTGAAGTTTCTT	6175	False	NA	38	True	AATATA	-39	NA	136059127	136102495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080492_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
Isoform_95452_4	chr1	+	9107	35	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	14.7554752022057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGTGGCTAGTGGGTT	6185	False	NA	3	True	AATAAA	-13	NA	136059137	136105736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080492_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
Isoform_95456_3	chr1	+	1900	2	FSM	ENSMUSG00000026404.13	ENSMUST00000129218.7	1364	2	24	-560	24	560	multi-exon	FALSE	canonical	3	59	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCACAAATACTGAATG	NA	False	NA	NA	False	AATAAA	-15	NA	136343032	136346090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_136343162_136344319
Isoform_95458_131	chr1	+	2139	8	FSM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	24	3	24	-3	multi-exon	FALSE	canonical	3	59	junction_1	8.75750407085377	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCGTTATTTATTTCAGT	NA	False	NA	7	True	AATAAA	-13	NA	136343032	136367893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136362243_136362373_136367490
Isoform_95459_11	chr1	+	2004	7	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	29	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	23.4004985701872	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTTATTTATTTCAG	NA	False	NA	6	True	AATAAA	-12	NA	136343037	136367892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136367490
Isoform_95460_6	chr1	+	2046	7	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	27	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	25.5631027502966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCGTTATTTATTTCAGT	NA	False	NA	7	True	AATAAA	-13	NA	136343035	136367893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136360049_136360302_136361450_136361604_136362243_136362373_136367490
Isoform_95461_3	chr1	+	1882	6	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	59	-6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	30.1396748489429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATCGTTATTTATTTC	NA	False	NA	4	True	AATAAA	-10	NA	136343067	136367890	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136360049_136360302_136361450_136361604_136367490
Isoform_95465_22	chr1	+	7073	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	29	1931	intron_retention	TRUE	non_canonical	0	0	junction_30	14.112602720815	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136394109	136457315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456691_136456740
Isoform_95468_12	chr1	+	3706	20	ISM	ENSMUSG00000041498.14	ENSMUST00000189413.7	8943	29	-88	28050	-88	7545	5prime_fragment	FALSE	canonical	3	49	junction_12	7.93114412247141	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAAGCAAAACAAA	NA	False	NA	NA	False	ATTAAA	-8	NA	136395584	136431199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
Isoform_95469_13	chr1	+	7095	29	FSM	ENSMUSG00000041498.14	ENSMUST00000189413.7	8943	29	-88	1936	-88	1929	multi-exon	FALSE	canonical	3	34	junction_22	10.1365045498829	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACCGCCTCCTAATCCA	NA	False	NA	22	True	AATAAA	-13	NA	136395584	136457313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
Isoform_9547_12	chr10	+	1133	1	Intergenic	novelGene_954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68063670	68064803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_68063700_68064800
Isoform_95477_25	chr1	+	4861	2	FSM	ENSMUSG00000041483.15	ENSMUST00000112046.2	4937	2	72	4	72	-4	multi-exon	FALSE	canonical	3	71	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGAGATATCACTTAGT	NA	False	NA	12	True	AATAAA	-25	NA	136552710	136557787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_136552790_136553005
Isoform_9548_5	chr10	+	1495	1	Intergenic	novelGene_955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-26	NA	68074796	68076291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_68074800_68076300
Isoform_95481_90	chr1	+	4860	2	FSM	ENSMUSG00000041483.15	ENSMUST00000047734.15	4933	2	67	6	67	-6	multi-exon	FALSE	canonical	3	143	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGGAGATATCACTTA	NA	False	NA	10	True	AATAAA	-23	NA	136552705	136557785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_136552790_136553009
Isoform_95485_4	chr1	+	360	3	NNC	ENSMUSG00000056268.16	novel	730	9	NA	NA	-60	-77896	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATATGGTACATTTA	NA	False	NA	NA	False	NA	NA	NA	138891386	138906958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_138891623_138893903_138893969_138906899
Isoform_95487_22	chr1	+	8247	23	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	11.4355000396583	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	NA	False	NA	8	True	AATAAA	-14	NA	138891462	139103778	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
Isoform_95488_5	chr1	+	8288	23	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	41	junction_8	11.4355000396583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891424	139103781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
Isoform_9549_6	chr10	+	178	1	Intergenic	novelGene_956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTTGGCAA	7640	False	NA	NA	False	NA	NA	NA	68145429	68145607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_68145400_68145600
Isoform_95491_10	chr1	+	8183	22	FSM	ENSMUSG00000056268.16	ENSMUST00000168527.8	8206	22	23	0	4	0	multi-exon	FALSE	canonical	3	22	junction_7	13.1823079402048	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891469	139103781	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
Isoform_95493_12	chr1	+	3519	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-74	-1091	intron_retention	TRUE	canonical	3	36	junction_4	7.92464510246358	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTTGAGTTTAGAAACT	NA	False	NA	NA	False	ATTAAA	-18	NA	139349951	139375830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_95497_6	chr1	+	4730	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-40	154	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTTTGGTTGTTGTAA	NA	False	NA	NA	False	AATAAA	-26	NA	139349985	139377075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_95498_6	chr1	+	6852	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-69	-1575	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGGTTCTGAGTCTT	NA	False	NA	26	True	AATAAA	-21	NA	139349956	139379168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_9550_3	chr10	+	351	1	Intergenic	novelGene_725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCGTGGTGGCACACA	NA	False	NA	NA	False	ATTAAA	-6	NA	8597342	8597693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_8597300_8597700
Isoform_95500_4	chr1	+	8393	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-39	-4	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCACACCCAGGTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	139349986	139380739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_95502_9	chr1	+	3471	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	-22	4912	-22	-1090	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGAGTTTAGAAACTT	NA	False	NA	NA	False	ATTAAA	-19	NA	139350097	139375831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_95504_4	chr1	+	8395	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	-39	5	-39	-5	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCACACCCAGGTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	139350080	139380738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_95508_29	chr1	+	9877	28	FSM	ENSMUSG00000033952.15	ENSMUST00000053364.12	9867	28	-10	0	-7	0	multi-exon	TRUE	canonical	3	70	junction_14	22.9621266275417	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTGTGTGTGGTTT	NA	False	NA	15	True	NA	NA	NA	139382502	139421829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
Isoform_95523_24	chr1	+	624	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	-44	0	5	0	multi-exon	FALSE	canonical	3	64	junction_1	245.711664806989	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615308	143622514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
Isoform_95526_185	chr1	+	663	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	49	2625	-4	0	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615343	143622514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
Isoform_95527_68	chr1	+	710	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	2	2625	2	0	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615296	143622514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
Isoform_95529_26	chr1	+	3518	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	49	-230	-4	-45	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	143615343	143625369	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
Isoform_9553_4	chr10	+	198	1	Intergenic	novelGene_957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTGAAAACAATGCTTAG	2397	False	NA	NA	False	NA	NA	NA	69153835	69154033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_69153800_69154000
Isoform_95539_42	chr1	+	1479	12	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	455.061706831934	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTCCATTCTTCAATT	NA	False	NA	24	True	NA	NA	NA	143653011	143682678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143678665_143678816_143682421
Isoform_9554_3	chr10	+	752	1	Intergenic	novelGene_958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	3124	False	NA	NA	False	NA	NA	NA	69154562	69155314	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_69154600_69155300
Isoform_95541_365	chr1	+	1300	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	34	362	1	2	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCATTCTTCAATTCTG	NA	False	NA	27	True	NA	NA	NA	143653043	143682681	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
Isoform_95543_21	chr1	+	1651	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	40	5	7	-5	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTTTCTTGGATTATT	NA	False	NA	NA	False	AATAAA	-19	NA	143653049	143683038	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
Isoform_95547_39	chr1	+	1448	12	NIC	ENSMUSG00000018189.13	novel	1845	11	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	458.199927492049	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTAAACTCCATTCTTC	NA	False	NA	20	True	NA	NA	NA	143653035	143682674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143678665_143678816_143682421
Isoform_95549_177	chr1	+	1300	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	15	530	-9	-5	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTAAACTCCATTCTTC	NA	False	NA	20	True	NA	NA	NA	143653033	143682674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
Isoform_95564_23	chr1	+	6484	42	ISM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	-36	9500	-36	0	5prime_fragment	FALSE	canonical	3	82	junction_1	100.513926275774	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150268552	150316066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
Isoform_95565_87	chr1	+	7548	52	FSM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	-6	-112	-6	0	multi-exon	TRUE	canonical	3	82	junction_1	100.054291298415	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150268582	150325678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
Isoform_9558_286	chr10	+	175	1	Intergenic	novelGene_959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACCAAAAAAAAAACCAAAAA	401	False	NA	NA	False	NA	NA	NA	69192496	69192671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_69192500_69192700
Isoform_9559_85	chr10	+	180	1	Antisense	novelGene_ENSMUSG00000112509.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAGAGATTTGAA	310	False	NA	NA	False	NA	NA	NA	69208861	69209041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_69208900_69209000
Isoform_95592_60	chr1	+	6322	41	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	55	9621	55	-1	5prime_fragment	FALSE	canonical	3	414	junction_6	68.8321826982117	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTGTTTGGCTTG	NA	False	NA	17	True	AATAAA	-18	NA	150269055	150316065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
Isoform_95593_64	chr1	+	6269	41	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	106	9623	-28	0	5prime_fragment	FALSE	canonical	3	414	junction_6	68.8321826982117	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTTGTTTGTTTGGCT	NA	False	NA	15	True	AATAAA	-16	NA	150269106	150316063	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
Isoform_95594_449	chr1	+	7344	51	FSM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	128	8	-6	0	multi-exon	FALSE	canonical	3	414	junction_6	73.7537117710017	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150269128	150325678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
Isoform_95597_15	chr1	+	7302	51	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	3	51	junction_47	103.286506379101	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150269136	150325683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321874_150321993_150323262_150323382_150324893_150324990_150325482
Isoform_9561_3	chr10	-	175	1	Intergenic	novelGene_960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTAGTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	69252417	69252242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_69252200_69252400
Isoform_9562_6	chr10	-	178	1	Intergenic	novelGene_961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAACAAGGGG	NA	False	NA	NA	False	NA	NA	NA	69443392	69443214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_69443200_69443400
Isoform_9565_13	chr10	+	184	1	Intergenic	novelGene_962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTTTCCCGAGG	9655	False	NA	NA	False	NA	NA	NA	69797180	69797364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_69797200_69797400
Isoform_95657_87	chr1	+	2786	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	-3	0	-3	0	multi-exon	FALSE	canonical	3	234	junction_7	396.626282743927	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGTCTGTAGCCTTTTA	NA	False	NA	11	True	ATTAAA	-28	NA	151220256	151232550	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
Isoform_9566_4	chr10	-	2124	1	Intergenic	novelGene_963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69859569	69857445	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_69857400_69859600
Isoform_95661_179	chr1	+	4264	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	-56	-893	4	-157	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220272	151240009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_95662_51	chr1	+	4299	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	-90	-894	11	-156	multi-exon	TRUE	canonical	3	234	junction_7	304.179802157895	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220238	151240010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_95663_60	chr1	+	4429	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	-64	-1050	-4	0	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220264	151240166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_95669_759	chr1	+	3473	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	32	6	0	1	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGCACTGTGGGATT	NA	False	NA	11	True	ATTAAA	-15	NA	151220259	151240167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_95671_1456	chr1	+	3309	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	39	163	-2	-156	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220266	151240010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_9569_45	chr10	-	176	1	Intergenic	novelGene_964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATCACA	NA	False	NA	NA	False	NA	NA	NA	69959897	69959721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_69959700_69959900
Isoform_95719_60	chr1	+	2458	15	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	47.2939138337512	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGACTGGGCTCGCG	NA	False	NA	14	True	AATAAA	-15	NA	151304410	151333911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
Isoform_95723_458	chr1	+	2642	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	106	1	0	-1	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGACTGGGCTCGCG	NA	False	NA	14	True	AATAAA	-15	NA	151304398	151333911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
Isoform_95725_30	chr1	+	2747	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	1	1	1	-1	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGACTGGGCTCGCG	NA	False	NA	14	True	AATAAA	-15	NA	151304293	151333911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
Isoform_95730_25	chr1	+	3971	15	NIC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-26	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	53.6363416244727	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTTTACCAATGTAGAA	NA	False	NA	13	True	NA	NA	NA	151446910	151595094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_151447017_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_95732_9	chr1	+	6634	15	NIC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	-93	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	53.6363416244727	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGTTGCTCATTTATC	NA	False	NA	11	True	AATAAA	-19	NA	151446843	151597690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_151447017_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_95736_204	chr1	+	3844	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	91	2596	12	1	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTTTACCAATGTAGAA	NA	False	NA	13	True	NA	NA	NA	151447214	151595094	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_95743_72	chr1	+	4189	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-256	2598	-69	-1	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGACTTTACCAATGTAG	NA	False	NA	11	True	NA	NA	NA	151446867	151595092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_95745_27	chr1	+	6538	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-7	0	-7	0	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGTTGCTCATTTATC	NA	False	NA	11	True	AATAAA	-19	NA	151447116	151597690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_95748_57	chr1	+	6440	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	91	0	12	0	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGTTGCTCATTTATC	NA	False	NA	11	True	AATAAA	-19	NA	151447214	151597690	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_95749_25	chr1	+	6722	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-193	2	-6	-2	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCACAGTTGCTCATTTA	NA	False	NA	9	True	AATAAA	-17	NA	151446930	151597688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_9575_26	chr10	+	2771	1	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	93309	0	15383	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGGAACTGTCAAATTT	566	False	NA	9	True	AATAAA	-20	NA	70026259	70029030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_70026300_70029000
Isoform_95755_5	chr1	+	6351	20	NIC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-12	6	combination_of_known_junctions	FALSE	canonical	3	7	junction_15	34.8339949218585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAAATTTCAAATTTTT	NA	False	NA	13	True	AATAAA	-22	NA	151631109	151697808	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681597_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
Isoform_95756_24	chr1	+	6299	20	NIC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-12	14	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	31.4765884947638	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAATTTTTAGAATCAT	NA	False	NA	21	True	AATAAA	-30	NA	151631109	151697816	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
Isoform_95757_5	chr1	+	6567	20	NIC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-22	272	combination_of_known_junctions	TRUE	canonical	3	23	junction_16	31.4765884947638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAAAAGTAGGTTCATT	NA	False	NA	NA	False	AATAAA	-25	NA	151631099	151698074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
Isoform_95759_49	chr1	+	6598	20	FSM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	1	-272	1	272	multi-exon	FALSE	canonical	3	102	junction_16	20.6122358303988	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAAAAGTAGGTTCATT	NA	False	NA	NA	False	AATAAA	-25	NA	151631125	151698074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
Isoform_95761_99	chr1	+	6340	20	FSM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	-15	2	-12	-2	multi-exon	FALSE	canonical	3	102	junction_16	20.6122358303988	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCTAGTTTTAAATTTC	NA	False	NA	5	True	AATAAA	-14	NA	151631109	151697800	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
Isoform_95762_5	chr1	+	4076	12	FSM	ENSMUSG00000032649.15	ENSMUST00000044311.9	4093	12	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_2	1.8227216050694	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCCTGTGTTTCTGCC	NA	False	NA	NA	False	AATAAA	-21	NA	152275597	152386446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_152276149_152344199_152344311_152347438_152347557_152348845_152348981_152360588_152360794_152365530_152365651_152371552_152371630_152375655_152375763_152378708_152378842_152379828_152379957_152382543_152382751_152384262
Isoform_95764_3	chr1	+	1568	3	FSM	ENSMUSG00000008475.14	ENSMUST00000143008.2	748	3	362	-1182	362	-20	multi-exon	FALSE	canonical	3	1297	junction_2	75.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTTTCTTAATTGAA	NA	False	NA	80	True	AATAAA	-15	NA	152644611	152651328	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_152644685_152647114_152647292_152650010
Isoform_95765_27	chr1	+	1968	15	FSM	ENSMUSG00000026480.13	ENSMUST00000027754.7	2596	15	-108	736	-55	-736	multi-exon	FALSE	canonical	0	0	junction_10	6.91382820210072	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGACAACTCAGAAGATT	451	False	NA	NA	False	ATTAAA	-21	NA	152683532	152712005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_152683957_152686668_152686752_152692741_152692851_152697266_152697402_152699967_152700076_152701632_152701693_152703168_152703213_152706102_152706245_152706443_152706513_152707364_152707441_152709073_152709097_152709527_152709680_152709819_152709932_152710777_152710956_152711752
Isoform_95766_3	chr1	+	2234	15	FSM	ENSMUSG00000026480.13	ENSMUST00000027754.7	2596	15	-155	517	-102	-517	multi-exon	FALSE	canonical	0	0	junction_10	6.91382820210072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGCTTGGGTTCCAGA	404	False	NA	NA	False	AATAAA	-15	NA	152683485	152712224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_152683957_152686668_152686752_152692741_152692851_152697266_152697402_152699967_152700076_152701632_152701693_152703168_152703213_152706102_152706245_152706443_152706513_152707364_152707441_152709073_152709097_152709527_152709680_152709819_152709932_152710777_152710956_152711752
Isoform_95768_17	chr1	+	2019	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	18	2416	-12	639	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCCTTTGTTGCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	24717728	24802113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
Isoform_95769_68	chr1	+	1924	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	113	2416	4	639	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCCTTTGTTGCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	24717823	24802113	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
Isoform_95771_13	chr1	+	2090	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	-50	2413	-50	642	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTTGTTGCTTTTAAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	24717660	24802116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
Isoform_95773_16	chr1	+	5192	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	113	-852	4	-1	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGAGTTGATGTTTT	NA	False	NA	12	True	ATTAAA	-24	NA	24717823	24805381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
Isoform_95775_4	chr1	+	5288	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	16	-851	-14	-2	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTGAGTTGATGTTT	NA	False	NA	11	True	ATTAAA	-23	NA	24717726	24805380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
Isoform_9578_3	chr10	-	979	1	Antisense	novelGene_ENSMUSG00000048701.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTGTACCATGAAGG	NA	False	NA	NA	False	NA	NA	NA	70027980	70027001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_70027000_70028000
Isoform_95780_15	chr1	+	4137	5	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	135347	-4	-3130	4	3prime_fragment	FALSE	canonical	3	59	junction_1	77.8985718739439	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTGTCTTTGTCCAG	NA	False	NA	17	True	AATAAA	-18	NA	152966095	152995011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_95786_9	chr1	+	402	3	FSM	ENSMUSG00000042751.15	ENSMUST00000190960.2	539	3	4	133	4	-133	multi-exon	FALSE	canonical	3	57	junction_2	72	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTGTGGCTTGTTTTCCT	NA	False	NA	8	True	AAGAAA	-20	NA	152969229	152970210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_152969301_152969782_152969860_152969956
Isoform_95789_146	chr1	+	3997	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	24	5	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTGTCTTTGTCCAGA	NA	False	NA	18	True	AATAAA	-19	NA	152969249	152995012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_95795_16	chr1	+	4073	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	-53	4	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTGTCTTTGTCCAG	NA	False	NA	17	True	AATAAA	-18	NA	152969172	152995011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_95798_13	chr1	+	3999	4	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	138976	0	499	0	3prime_fragment	FALSE	canonical	3	223	junction_2	11.8415464455544	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTGTGTCTTTGT	NA	False	NA	13	True	AATAAA	-14	NA	152969724	152995007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_95799_5	chr1	+	3923	4	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	138941	111	464	-14	3prime_fragment	FALSE	canonical	3	223	junction_2	11.8415464455544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATTTCACAGTGAAATA	NA	False	NA	-98	True	AATAAA	-21	NA	152969689	152994896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_95802_7	chr1	+	2328	5	FSM	ENSMUSG00000026475.8	ENSMUST00000027748.8	2339	5	5	6	5	-6	multi-exon	FALSE	canonical	1	1	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATTTCCCAGGACAGT	NA	False	NA	NA	False	AATAAA	-17	NA	153616099	153621208	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_153616259_153616608_153616720_153617365_153617428_153617708_153617876_153619379
Isoform_95804_4	chr1	+	2733	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	0	59	0	-59	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTGACTTGTTTCTT	NA	False	NA	28	True	TATAAA	-21	NA	153775689	153785410	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
Isoform_95805_190	chr1	+	1354	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	4	1434	4	107	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAATCTTGCTTTTGTTGG	NA	False	NA	26	True	NA	NA	NA	153775693	153784035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
Isoform_95808_27	chr1	+	2771	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-19	1837	-19	1575	multi-exon	TRUE	canonical	3	152	junction_7	29.3257565972304	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATGTGGGCCTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	155034441	155079568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
Isoform_95810_310	chr1	+	2450	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-1	2140	-1	1272	multi-exon	FALSE	canonical	3	152	junction_7	29.3257565972304	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGGTATTTTATCTT	NA	False	NA	9	True	AATAAA	-19	NA	155034459	155079265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
Isoform_95811_38	chr1	+	2738	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	14	1837	10	1575	multi-exon	FALSE	canonical	3	152	junction_7	29.3257565972304	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATGTGGGCCTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	155034474	155079568	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
Isoform_95820_311	chr1	+	987	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	6	0	0	0	multi-exon	FALSE	canonical	3	223	junction_3	63.2525800966956	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTT	NA	False	NA	15	True	NA	NA	NA	155433871	155448034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
Isoform_95824_9	chr1	+	1252	4	FSM	ENSMUSG00000033701.14	ENSMUST00000097529.5	1255	4	0	3	0	-3	multi-exon	FALSE	canonical	3	9	junction_3	164.081280671095	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATCCCGGAGATAAGT	NA	False	NA	3	True	NA	NA	NA	155433871	155463541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155463185
Isoform_95826_229	chr1	+	1492	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	3	4097	-1	138	multi-exon	FALSE	canonical	3	134	junction_7	98.5478232605254	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGACGTCTCAGCAACTC	NA	False	NA	29	True	AATAAA	-21	NA	155433870	155562979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
Isoform_95828_17	chr1	+	1600	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	0	3992	0	243	multi-exon	TRUE	canonical	3	134	junction_7	98.5478232605254	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGAAATTTATCACTG	NA	False	NA	6	True	AATATA	-19	NA	155433867	155563084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
Isoform_95829_9	chr1	+	1654	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	31	3907	27	328	multi-exon	FALSE	canonical	3	134	junction_7	98.5478232605254	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGCCCCTCTCTCTCT	NA	False	NA	91	True	ATTAAA	-16	NA	155433898	155563169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
Isoform_95834_56	chr1	+	2489	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	2	0	2	0	multi-exon	FALSE	canonical	3	72	junction_1	87	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155911473	155929275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155911667_155916820_155916881_155927039
Isoform_95838_18	chr1	+	2435	2	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTCAGCAGGTTTTAT	NA	False	NA	-1	True	AATAAA	-11	NA	155911463	155929271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_155911667_155927039
Isoform_95841_47	chr1	+	2660	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155911473	155929275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_155911838_155916820_155916881_155927039
Isoform_95849_216	chr1	+	2408	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-26	207	1	0	multi-exon	FALSE	canonical	3	163	junction_1	41.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155916636	155929275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155916749_155916820_155916881_155927039
Isoform_95851_10	chr1	+	2622	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-35	2	-8	-2	multi-exon	FALSE	canonical	3	163	junction_1	41.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACCTGGCTTTTGTCTC	NA	False	NA	8	True	AATAAA	-17	NA	155916627	155929480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155916749_155916820_155916881_155927039
Isoform_95852_11	chr1	+	5151	6	NIC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	1	-43	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	53.9874059387928	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTTTACTAAAATTT	NA	False	NA	8	True	AATAAA	-20	NA	155916636	155944564	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_155916749_155916820_155916881_155935156_155935334_155937333_155937916_155939338_155939441_155940446
Isoform_95853_222	chr1	+	2348	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-26	207	1	0	multi-exon	FALSE	canonical	3	145	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155916636	155929275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155916749_155927039
Isoform_95854_15	chr1	+	2557	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-27	-1	0	1	multi-exon	FALSE	canonical	3	145	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGGCTTTTGTCTCTTT	NA	False	NA	11	True	AATAAA	-20	NA	155916635	155929483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155916749_155927039
Isoform_95859_11	chr1	+	5415	6	NIC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	1	-49	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	45.283992756823	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGACTGATTTTTTACTA	NA	False	NA	2	True	AATAAA	-14	NA	155916636	155944558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_155916749_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
Isoform_95861_27	chr1	+	5084	5	FSM	ENSMUSG00000050565.17	ENSMUST00000060404.5	5135	5	3	48	3	-48	multi-exon	FALSE	canonical	3	13	junction_1	13.683932183404	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTTTTTACTAA	NA	False	NA	3	True	AATAAA	-15	NA	155916638	155944559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155916749_155935156_155935334_155937333_155937916_155939338_155939441_155940446
Isoform_95862_12	chr1	+	1749	2	FSM	ENSMUSG00000050565.17	ENSMUST00000131359.2	621	2	0	-1128	0	-732	multi-exon	FALSE	canonical	3	246	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTCTAATTTTCTCC	NA	False	NA	9	True	AATAAA	-13	NA	155916635	155928543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_155916881_155927039
Isoform_95864_3	chr1	+	4787	3	ISM	ENSMUSG00000050565.17	ENSMUST00000060404.5	5135	5	20751	5	-1572	-5	3prime_fragment	FALSE	canonical	3	46	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGGGTGTGCGGTTGT	NA	False	NA	46	True	AATAAA	-9	NA	155937386	155944602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_155937916_155939338_155939441_155940446
Isoform_95865_3	chr1	+	2091	9	ISM	ENSMUSG00000026596.14	ENSMUST00000027888.13	3549	12	-261	7230	2	5493	5prime_fragment	FALSE	canonical	2	3	junction_2	3.46410161513775	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGTTTGAAGGATGGC	NA	False	NA	NA	False	AATAAA	-15	NA	156386357	156463056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_156386776_156448408_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634
Isoform_95866_320	chr1	+	812	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	380	2	92	1	multi-exon	FALSE	canonical	3	989	junction_1	26.5	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGGCCCAGTGTCT	NA	False	NA	33	True	AATAAA	-15	NA	157240301	157247804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_157240696_157241313_157241366_157247438
Isoform_95867_715	chr1	+	790	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	402	2	114	1	multi-exon	FALSE	canonical	3	989	junction_1	26.5	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGGCCCAGTGTCT	NA	False	NA	33	True	AATAAA	-15	NA	157240323	157247804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_157240696_157241313_157241366_157247438
Isoform_95869_15	chr1	+	1393	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	-198	-1	-198	1	multi-exon	FALSE	canonical	3	989	junction_1	26.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGCCCAGTGTCTTCC	NA	False	NA	36	True	AATAAA	-18	NA	157239723	157247807	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_157240696_157241313_157241366_157247438
Isoform_9587_32	chr10	-	179	1	Intergenic	novelGene_965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGATTGCAAA	NA	False	NA	NA	False	NA	NA	NA	70074734	70074555	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_70074600_70074700
Isoform_95875_55	chr1	+	1616	10	FSM	ENSMUSG00000033488.12	ENSMUST00000046743.11	1618	10	3	-1	3	1	multi-exon	FALSE	canonical	3	36	junction_7	9.08125188520113	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	15	True	NA	NA	NA	157286152	157316631	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
Isoform_95877_4	chr1	+	1213	8	FSM	ENSMUSG00000033488.12	ENSMUST00000193791.6	778	8	-3	-432	-3	0	multi-exon	FALSE	canonical	1	1	junction_7	18.9725903258746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	157286143	157316630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157316012
Isoform_95878_3	chr1	+	1123	7	FSM	ENSMUSG00000033488.12	ENSMUST00000119891.7	1125	7	2	0	2	0	multi-exon	FALSE	canonical	1	3	junction_6	19.7624784770422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	157286151	157316630	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157316012
Isoform_95879_112	chr1	+	2710	20	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	10	combination_of_known_junctions	FALSE	canonical	3	166	junction_4	54.1975457121338	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTATTGAGCCACAG	NA	False	NA	NA	False	AATAAA	-21	NA	159059759	159172680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
Isoform_95886_7	chr1	+	2804	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	8	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	106.317637295041	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAGTTTATTGAGCCAC	NA	False	NA	NA	False	AATAAA	-19	NA	159059759	159172678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
Isoform_95888_119	chr1	+	3052	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-136	2200	-130	340	multi-exon	FALSE	canonical	3	188	junction_4	50.8633495988022	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATGTACTGGTGAGTA	NA	False	NA	NA	False	TTTAAA	-6	NA	159059759	159173010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
Isoform_95898_5	chr1	+	2949	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-131	346	combination_of_known_junctions	TRUE	canonical	3	13	junction_2	90.9490428485189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059758	159173016	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_159060421_159067131_159067192_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
Isoform_95901_1023	chr1	+	604	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	43	2352	43	-2	multi-exon	FALSE	canonical	3	2655	junction_1	51	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGGTCTTTCCTTCAA	NA	False	NA	15	True	AATAAA	-15	NA	160022827	160027388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160022882_160024515_160024675_160026997
Isoform_95902_314	chr1	+	851	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	47	2101	-41	249	multi-exon	FALSE	canonical	3	2655	junction_1	51	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCATCTTTTAAATT	NA	False	NA	7	True	AATAAA	-15	NA	160022831	160027639	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160022882_160024515_160024675_160026997
Isoform_95904_92	chr1	+	627	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	20	2352	20	-2	multi-exon	FALSE	canonical	3	2655	junction_1	51	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGGTCTTTCCTTCAA	NA	False	NA	15	True	AATAAA	-15	NA	160022804	160027388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160022882_160024515_160024675_160026997
Isoform_95905_18	chr1	+	883	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	11	2105	11	245	multi-exon	FALSE	canonical	3	2655	junction_1	51	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGTTTCATCTTTTA	NA	False	NA	3	True	AATAAA	-11	NA	160022795	160027635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160022882_160024515_160024675_160026997
Isoform_9591_3	chr10	-	172	1	Intergenic	novelGene_966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGACAACAAC	4461	False	NA	NA	False	NA	NA	NA	70594857	70594685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_70594700_70594900
Isoform_95914_21	chr1	+	4083	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	-6	6929	-6	232	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACTTTATTTTAATAAC	NA	False	NA	NA	False	ATTAAA	-19	NA	160733981	160795619	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
Isoform_95915_8	chr1	+	5237	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	-6	5775	-6	1386	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTGAAGAGTGAGGAA	NA	False	NA	NA	False	ATTAAA	-12	NA	160733981	160796773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
Isoform_9592_6	chr10	-	196	1	Intergenic	novelGene_967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAATGTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70691474	70691278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_70691300_70691500
Isoform_95925_397	chr1	+	500	12	FSM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	3	-1	0	1	multi-exon	FALSE	canonical	3	1206	junction_7	1656.43137771865	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_95926_834	chr1	+	458	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	99	0	0	0	multi-exon	TRUE	canonical	3	3085	junction_7	1053.46856146731	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_9593_114	chr10	-	175	1	Intergenic	novelGene_968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATACATTTTAGTTA	NA	False	NA	NA	False	NA	NA	NA	70845465	70845290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_70845300_70845500
Isoform_95930_59	chr1	+	344	8	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1954.09814262754	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864422_160865794_160865843_160866026
Isoform_95931_20	chr1	+	771	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1206	junction_6	1448.71477178912	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_95932_56	chr1	+	894	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	3085	junction_6	967.274955483792	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_95943_21	chr1	+	1437	8	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_4	1075.75672464189	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_95944_22	chr1	+	1627	7	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	3576	junction_1	865.328967631514	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_9595_3	chr10	+	167	1	Intergenic	novelGene_969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCTTATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	71023972	71024139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_71024000_71024100
Isoform_95952_23	chr1	+	1631	7	FSM	ENSMUSG00000053332.14	ENSMUST00000162163.8	1614	7	-18	1	0	1	multi-exon	FALSE	canonical	3	3085	junction_3	1089.57866474462	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160862765_160863321_160863375_160863552_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_95954_22	chr1	+	1819	6	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	897.552984508436	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_160862765_160863321_160863375_160863552_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_95984_6	chr1	+	4249	4	FSM	ENSMUSG00000026708.17	ENSMUST00000028035.14	4883	4	240	394	3	2	multi-exon	FALSE	canonical	3	79	junction_2	20.7417989148054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTCCAATTGAAGTT	NA	False	NA	8	True	AATAAA	-14	NA	160898522	160913896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477
Isoform_95985_87	chr1	+	1732	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	175	3	-8	-3	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGAAGTTATTTATTCT	NA	False	NA	17	True	AATAAA	-23	NA	160898511	160913905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
Isoform_95986_7	chr1	+	1969	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	-64	5	-10	-5	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATTGAAGTTATTTATT	NA	False	NA	15	True	AATAAA	-21	NA	160898272	160913903	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
Isoform_95987_6	chr1	+	2130	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	163	-383	-20	1	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCTGGTCTTGTCTTTG	NA	False	NA	9	True	NA	NA	NA	160898499	160914291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
Isoform_95989_13	chr1	+	1609	5	FSM	ENSMUSG00000026708.17	ENSMUST00000143486.7	1997	5	1	387	1	-1	multi-exon	FALSE	canonical	3	21	junction_2	42.0200844834943	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGTTATTTATTCTGT	NA	False	NA	19	True	AATAAA	-25	NA	160898536	160913907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160898927_160902326_160902501_160905898_160906051_160910477_160911021_160913557
Isoform_95991_8	chr1	+	3566	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3546735006532	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970257	160998068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_160970289_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
Isoform_95992_4	chr1	+	623	2	ISM	ENSMUSG00000044835.16	ENSMUST00000052245.9	849	6	-50	12728	5	-11832	5prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCATCAAGGTCAAACTT	NA	False	NA	NA	False	ATTAAA	-14	NA	160970286	160979033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_160970411_160978534
Isoform_95993_109	chr1	+	3602	9	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.1204983904212	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970320	160998068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995565_160995674_160995721
Isoform_95994_8	chr1	+	1042	7	FSM	ENSMUSG00000044835.16	ENSMUST00000111608.8	3714	7	13	2659	2	0	multi-exon	FALSE	canonical	0	0	junction_1	35.5547308932143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTTCCTGCCAAGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	160970294	160995409	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281
Isoform_95995_14	chr1	+	3561	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	47.7634477270591	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970318	160998068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160995281_160995606_160995654_160995708_160995731
Isoform_95997_3	chr1	+	3510	7	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.6739504924393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTATGTTACACGTT	NA	False	NA	4	True	NA	NA	NA	160970268	160998066	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_160970289_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160995281_160995541_160995590
Isoform_95998_8	chr1	+	3160	5	NNC	ENSMUSG00000044835.16	novel	523	5	NA	NA	17755	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	39.789288759665	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTACACGTTTTC	591	False	NA	7	True	NA	NA	NA	160988091	160998069	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
Isoform_96_3	ERCC-00085	+	828	1	FSM	ERCC-00085A	DQ883669	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	828	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00085_+_0_800
Isoform_9600_24	chr10	+	162	1	Intergenic	novelGene_970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGCAAATCGTGT	7412	False	NA	NA	False	NA	NA	NA	71138962	71139124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_71139000_71139100
Isoform_96000_128	chr1	+	2467	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	1	1854	1	-1	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGCTTTTCCTTTCTT	NA	False	NA	7	True	TATAAA	-17	NA	33758976	33779791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
Isoform_96004_71	chr1	+	4318	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	3	1	3	-1	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATTGTGTGTGGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	33758978	33781644	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
Isoform_9601_3	chr10	-	180	1	Intergenic	novelGene_971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	71145910	71145730	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_71145700_71145900
Isoform_96011_14	chr1	+	1471	2	FSM	ENSMUSG00000026698.9	ENSMUST00000028021.7	2196	2	19	706	19	-706	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGTCTAGTATTTTA	NA	False	NA	11	True	ATTAAA	-14	NA	161796775	161799193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_161796849_161797795
Isoform_96012_15	chr1	+	1469	2	FSM	ENSMUSG00000026698.9	ENSMUST00000111594.3	3290	2	10	1811	8	-706	multi-exon	FALSE	canonical	3	13	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGTCTAGTATTTTA	NA	False	NA	11	True	ATTAAA	-14	NA	161796764	161799193	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_161796849_161797808
Isoform_96017_94	chr1	+	1326	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	41	94	4	-94	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTGTTTGAAAACGAG	NA	False	NA	22	True	AATAAA	-18	NA	162398199	162422840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
Isoform_9602_14	chr10	-	187	1	Intergenic	novelGene_972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCTTCACTCTGTGTGT	6916	False	NA	NA	False	NA	NA	NA	71152933	71152746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_71152700_71152900
Isoform_96023_7	chr1	+	5131	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	38	-3708	1	-5	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAAGTAAGCACTGT	NA	False	NA	62	True	AATAAA	-13	NA	162398196	162426642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
Isoform_96024_29	chr1	+	2626	8	FSM	ENSMUSG00000026696.16	ENSMUST00000132158.8	2752	8	115	11	3	-5	multi-exon	FALSE	canonical	3	16	junction_7	107.103040220574	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAAGTAAGCACTGT	NA	False	NA	62	True	AATAAA	-13	NA	162398198	162426642	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162424617
Isoform_96028_6	chr1	+	3987	21	FSM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	19	6	19	-6	multi-exon	FALSE	canonical	3	16	junction_19	53.7530231707948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTCCAACTCTCATT	NA	False	NA	12	True	ATTAAA	-19	NA	163607170	163744672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163739640_163739707_163743293
Isoform_96029_7	chr1	+	3919	21	FSM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	87	6	87	-6	multi-exon	FALSE	canonical	3	16	junction_19	53.7530231707948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTCCAACTCTCATT	NA	False	NA	12	True	ATTAAA	-19	NA	163607238	163744672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163739640_163739707_163743293
Isoform_9603_20	chr10	-	382	1	Intergenic	novelGene_973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGTGA	334	False	NA	NA	False	NA	NA	NA	71159515	71159133	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_71159100_71159500
Isoform_96030_268	chr1	+	3852	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	88	6	88	-6	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTCCAACTCTCATT	NA	False	NA	12	True	ATTAAA	-19	NA	163607239	163744672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
Isoform_96032_66	chr1	+	3921	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	20	5	20	-5	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTCCAACTCTCATTT	NA	False	NA	13	True	ATTAAA	-20	NA	163607171	163744673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
Isoform_96040_3	chr1	+	1178	6	ISM	ENSMUSG00000026584.15	ENSMUST00000170359.8	4288	14	223	14798	208	-4532	5prime_fragment	FALSE	canonical	3	79	junction_2	14.0939703419583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAAGTTTCTTTATGC	NA	False	NA	NA	False	ATTAAA	-16	NA	163757581	163767881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449
Isoform_96041_6	chr1	+	4347	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	21	0	-4	0	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTCTTGTCTGT	NA	False	NA	NA	False	AATAAA	-30	NA	163757354	163782695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96042_46	chr1	+	2966	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	293	1109	253	215	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTCTTTTATGTGCT	NA	False	NA	9	True	AATAAA	-18	NA	163757626	163781586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96045_21	chr1	+	3244	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	15	1109	-10	215	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTCTTTTATGTGCT	NA	False	NA	9	True	AATAAA	-18	NA	163757348	163781586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96048_8	chr1	+	4114	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	248	6	208	-6	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTATTTCTTGTGTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	163757581	163782689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96049_31	chr1	+	4060	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	293	15	253	1	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGTTACAATTATTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	163757626	163782680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96053_4	chr1	+	4163	14	NIC	ENSMUSG00000026584.15	novel	4336	14	NA	NA	235	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	25.1002722821696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGTTACAATTATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	163757608	163782679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96054_22	chr1	+	2949	14	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	209	215	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	22.8377347864782	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTCTTTTATGTGCT	NA	False	NA	9	True	AATAAA	-18	NA	163757582	163781586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96056_4	chr1	+	3187	14	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	11	215	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	22.8377347864782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTCTTTTATGTGCT	NA	False	NA	9	True	AATAAA	-18	NA	163757344	163781586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96059_3	chr1	+	4305	14	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	22.8377347864782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTATTTCTTGTGTTCT	NA	False	NA	NA	False	AATAAA	-23	NA	163757328	163782688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96060_6	chr1	+	3038	14	FSM	ENSMUSG00000026584.15	ENSMUST00000162234.2	4336	14	206	1092	206	215	multi-exon	FALSE	canonical	3	18	junction_6	30.7224644598249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTCTTTTATGTGCT	NA	False	NA	9	True	AATAAA	-18	NA	163757579	163781586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_96061_55	chr1	+	1417	2	FSM	ENSMUSG00000041396.14	ENSMUST00000111490.2	1419	2	1	1	1	-1	multi-exon	FALSE	canonical	3	75	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGACTGTTCAATTTC	NA	False	NA	8	True	AATAAA	-15	NA	163822458	163824811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163822547_163823482
Isoform_96063_37	chr1	+	1504	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	7	2	7	-2	multi-exon	FALSE	canonical	3	49	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGACTGTTCAATTT	NA	False	NA	7	True	AATAAA	-14	NA	163822464	163824810	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_163822641_163823482
Isoform_96065_71	chr1	+	3437	6	FSM	ENSMUSG00000040918.13	ENSMUST00000159230.8	3432	6	-7	2	2	-2	multi-exon	FALSE	canonical	3	46	junction_2	97.8296478578963	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCCTTTTCACTCAG	NA	False	NA	11	True	AATAAA	-13	NA	164076616	164092936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164089809_164090188_164090331_164090958
Isoform_96067_781	chr1	+	3551	6	FSM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	2	18	2	-2	multi-exon	FALSE	canonical	3	256	junction_3	19.417517864032	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCCTTTTCACTCAG	NA	False	NA	11	True	AATAAA	-13	NA	164076616	164092936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
Isoform_9607_6	chr10	+	175	1	Intergenic	novelGene_974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	71171794	71171969	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_71171800_71172000
Isoform_96072_14	chr1	+	3937	5	NIC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	256	junction_3	15.9216833280907	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCCTTTTCACTCAG	NA	False	NA	11	True	AATAAA	-13	NA	164076610	164092936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164090331_164090958
Isoform_96073_10	chr1	+	3681	7	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	128.712535002099	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076616	164092938	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_164077026_164081746_164081875_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
Isoform_96079_74	chr1	+	1886	6	FSM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	18	5	18	-5	multi-exon	FALSE	canonical	2	28	junction_1	8.97552226892675	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGTGTGGTGTCATCT	NA	False	NA	15	True	AATAAA	-15	NA	164103171	164115411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809_164113965_164115075
Isoform_9608_8	chr10	+	185	1	Intergenic	novelGene_975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGCATTATTAAAA	1290	False	NA	NA	False	NA	NA	NA	71182666	71182851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_71182700_71182900
Isoform_96080_3	chr1	+	771	5	ISM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	13	104373	13	-1310	5prime_fragment	FALSE	canonical	3	68	junction_2	26.0959767013998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCAGGGATTGGTTCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	164135253	164160496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180
Isoform_96081_84	chr1	+	1730	14	FSM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	5	5	5	1	multi-exon	FALSE	canonical	3	68	junction_2	20.0017750691572	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTGACTTTGGTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	164135245	164264864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
Isoform_96082_47	chr1	+	1727	14	NIC	ENSMUSG00000026575.16	novel	1740	14	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	27.275061761302	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTGACTTTGGTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	164135245	164264864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_164135324_164135628_164135820_164140424_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
Isoform_96087_6	chr1	+	690	6	FSM	ENSMUSG00000026575.16	ENSMUST00000192710.2	687	6	0	-3	0	1	multi-exon	FALSE	canonical	3	9	junction_1	52.9550752997293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTGACTTTGGTTTTA	7384	False	NA	NA	False	AATAAA	-15	NA	164200837	164264864	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_164200904_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
Isoform_96089_186	chr1	+	746	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	185	94	-2	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288790	165308689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
Isoform_96094_5	chr1	+	1331	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	-400	94	0	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288205	165308689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
Isoform_96095_8	chr1	+	877	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	54	94	54	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288659	165308689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
Isoform_96096_9	chr1	+	858	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	169	-2	-18	2	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCCCACTTCATCTTTC	NA	False	NA	109	True	AATAAA	-18	NA	165288774	165308785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
Isoform_96097_10	chr1	+	711	4	NIC	ENSMUSG00000026568.7	novel	1025	5	NA	NA	1	10	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	205.825708360793	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGCCTCAAGGGGAC	NA	False	NA	22	True	AATAAA	-27	NA	165288793	165308698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_165289081_165305789_165305875_165307035_165307148_165308471
Isoform_96099_226	chr1	+	2143	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	15	5	15	-5	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGTGTTGGACTGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	165591329	165602872	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
Isoform_96102_11	chr1	+	788	4	FSM	ENSMUSG00000000544.15	ENSMUST00000027847.7	787	4	0	-1	0	1	multi-exon	FALSE	canonical	3	10	junction_3	86.0736119067085	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTCTTTCTCGGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	165957985	165981706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165981478
Isoform_96104_23	chr1	+	2497	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	16	2	16	-1	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTCTTTGTTCACCCA	NA	False	NA	8	True	AATAAA	-17	NA	165957822	165994077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_96105_183	chr1	+	2333	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	182	0	3	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165957988	165994079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_96106_224	chr1	+	2305	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	210	0	-19	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165958016	165994079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_96108_13	chr1	+	2247	8	FSM	ENSMUSG00000000544.15	ENSMUST00000166860.2	2227	8	-19	-1	-19	0	multi-exon	TRUE	non_canonical	0	0	junction_7	70.4990953770301	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165958016	165994079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715_165992866_165992923
Isoform_96110_24	chr1	+	2178	6	NIC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	10	junction_1	77.1974092829546	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCACTTTTCTTTGTTCA	NA	False	NA	4	True	AATAAA	-13	NA	165957982	165994073	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_165958174_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_96112_84	chr1	+	2253	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	-40	2	-40	-2	multi-exon	FALSE	canonical	3	160	junction_4	12.2357789173508	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTTCCTGTTTATTC	NA	False	NA	13	True	AATAAA	-13	NA	166206625	166221188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
Isoform_96113_153	chr1	+	1927	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	285	3	43	-3	multi-exon	FALSE	canonical	3	160	junction_4	12.2357789173508	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTTTCCTGTTTATT	NA	False	NA	12	True	AATAAA	-12	NA	166206950	166221187	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
Isoform_96118_489	chr1	+	1193	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	381	-1	23	1	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	False	NA	16	True	AATAAA	-23	NA	167136327	167158355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
Isoform_96119_48	chr1	+	1291	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	283	-1	-9	1	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	False	NA	16	True	AATAAA	-23	NA	167136229	167158355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
Isoform_96123_187	chr1	+	2558	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	34	243	34	-243	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTCTGTCCTTTCT	NA	False	NA	19	True	AATAAA	-16	NA	167177593	167195858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
Isoform_96124_683	chr1	+	2356	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	233	246	-12	-246	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTTTTCTGTCCTT	NA	False	NA	16	True	AATAAA	-13	NA	167177792	167195855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
Isoform_96129_70	chr1	+	2620	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	215	0	-30	0	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTGCCGTCTTAATT	NA	False	NA	6	True	ATTAAA	-18	NA	167177774	167196101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
Isoform_96132_18	chr1	+	2799	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	34	2	34	-2	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTTTTGCCGTCTTAA	NA	False	NA	4	True	ATTAAA	-16	NA	167177593	167196099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
Isoform_96139_5	chr1	+	3124	8	FSM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	-28	-1	-28	1	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305394	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTCATTTTCGTTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	170472072	170510359	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140_170494367_170496319_170496833_170508605_170508783_170509292
Isoform_96140_3	chr1	+	968	6	FSM	ENSMUSG00000026649.15	ENSMUST00000151340.8	793	6	-4	-171	-4	8	multi-exon	FALSE	canonical	0	0	junction_1	4.40908153700972	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGACCTGGGTTTTCTCC	NA	False	NA	NA	False	AATAAA	-20	NA	170941553	170954519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_170941666_170950614_170950763_170952602_170952666_170952838_170952920_170953602_170953780_170954132
Isoform_96141_3	chr1	+	2759	8	FSM	ENSMUSG00000006403.14	ENSMUST00000111314.2	3761	8	285	717	285	-716	multi-exon	FALSE	canonical	2	2	junction_1	2.0995626366713	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCAGTAGGTGCTCAAG	NA	False	NA	NA	False	NA	NA	NA	171079969	171087489	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171080430_171080655_171080789_171081461_171081633_171083716_171084004_171084096_171084284_171084523_171084700_171085287_171085464_171086320
Isoform_96142_118	chr1	+	2100	9	NIC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	non_canonical	1	46	junction_1	80.4478674359986	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097903	171104469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171097985_171098152_171098260_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
Isoform_96143_9	chr1	+	1977	9	NIC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	91.0706284978862	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTGATTTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	171097903	171104467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171097985_171098152_171098260_171098772_171098944_171099397_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
Isoform_96144_496	chr1	+	1961	9	NNC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	46	junction_8	69.4041605381118	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097903	171104469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_171097985_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678_171104391_171104422
Isoform_96146_20	chr1	+	1869	8	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	74.0904025842892	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTGATTTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	171097904	171104467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171097985_171098772_171098944_171099397_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
Isoform_96147_9	chr1	+	2291	8	NNC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	-5	-1	intron_retention	FALSE	non_canonical	3	46	junction_7	62.1630509061386	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGCTTGTGATTTCTG	NA	False	NA	13	True	AATAAA	-13	NA	171097903	171104466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_171097985_171098772_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678_171104391_171104422
Isoform_96149_10	chr1	+	3081	7	NNC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	-4	0	intron_retention	FALSE	non_canonical	3	46	junction_6	66.4665747241089	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097904	171104469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678_171104391_171104422
Isoform_96150_14	chr1	+	3630	5	NIC	ENSMUSG00000052423.16	novel	2805	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	209	junction_1	11.0764389584379	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTGATTTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	171097904	171104467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
Isoform_96152_44	chr1	+	2329	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	254	-20	0	20	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAGGTCAGGTCAAAG	1446	False	NA	NA	False	AATAAA	-37	NA	171156966	171169919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_96156_105	chr1	+	2284	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	3	-669	3	20	multi-exon	FALSE	canonical	3	102	junction_1	61.0184398358398	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAGGTCAGGTCAAAG	1458	False	NA	NA	False	AATAAA	-37	NA	171156978	171169919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_96160_31	chr1	+	2290	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	-6	20	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAGGTCAGGTCAAAG	1651	False	NA	NA	False	AATAAA	-37	NA	171157171	171169919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_96161_34	chr1	+	1632	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	1640	False	NA	18	True	NA	NA	NA	171157160	171169250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_96164_33	chr1	+	2253	5	FSM	ENSMUSG00000013973.13	ENSMUST00000129116.8	849	5	-4	-1400	-4	18	multi-exon	FALSE	canonical	3	47	junction_1	84.8038177206663	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTGAGGTCAGGTCAA	1653	False	NA	NA	False	AATAAA	-35	NA	171157173	171169917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_96169_16	chr1	+	684	4	FSM	ENSMUSG00000006412.11	ENSMUST00000006579.5	885	4	-31	232	29	200	multi-exon	FALSE	canonical	3	27	junction_3	957.822994550083	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	29	True	NA	NA	NA	171173266	171185738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185355
Isoform_96170_1440	chr1	+	622	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	29	1084	29	200	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	29	True	NA	NA	NA	171173266	171185738	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
Isoform_96174_51	chr1	+	1704	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	30	1	-30	-1	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGGCTCTATTTTTTG	NA	False	NA	4	True	NA	NA	NA	171173267	171186821	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
Isoform_96178_5	chr1	+	4466	12	FSM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	24	4	-21	-4	multi-exon	FALSE	canonical	0	0	junction_5	11.0123897167112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGTGTATGTACTTTG	2516	False	NA	NA	False	AATAAA	-24	NA	171216545	171237804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171216932_171225042_171225146_171228123_171228269_171229492_171229576_171229724_171229833_171230780_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234925_171235204_171235295
Isoform_96179_37	chr1	+	3652	7	ISM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	14250	2	14205	-2	3prime_fragment	FALSE	canonical	0	0	junction_5	9.51606828241346	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGTATGTACTTTGTC	895	False	NA	NA	False	AATAAA	-26	NA	171230771	171237806	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234925_171235204_171235295
Isoform_9618_6	chr10	+	177	1	Intergenic	novelGene_976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATATGCTGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	71257797	71257974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_71257800_71258000
Isoform_96182_4	chr1	+	1818	10	NIC	ENSMUSG00000026641.14	novel	1115	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	69.9292411329631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTCTTCCTCCT	6734	False	NA	63	True	GATAAA	-15	NA	171238877	171246325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
Isoform_96183_14	chr1	+	1839	10	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	55.998015837865	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6746	False	NA	65	True	GATAAA	-17	NA	171238889	171246327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
Isoform_96186_32	chr1	+	1753	10	FSM	ENSMUSG00000026641.14	ENSMUST00000001284.13	1115	10	0	-638	0	2	multi-exon	FALSE	canonical	3	42	junction_4	49.4805111903093	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	65	True	GATAAA	-17	NA	171238880	171246327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
Isoform_96188_4	chr1	+	3249	11	Fusion	ENSMUSG00000026641.14_ENSMUSG00000103711.2	novel	1115	10	NA	NA	2	-4	intron_retention	FALSE	canonical	3	27	junction_10	65.466709097067	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTATGAGTTGTATTTA	6739	False	NA	NA	False	AATAAA	-13	NA	171238882	171247915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Fusion_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599_171247669_171247758
Isoform_96189_221	chr1	+	1784	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	0	383	0	2	multi-exon	FALSE	canonical	3	185	junction_1	10.3363197596069	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	65	True	GATAAA	-17	NA	171238880	171246327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
Isoform_96190_12	chr1	+	3285	11	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	0	1208	intron_retention	FALSE	canonical	3	27	junction_10	51.4105047631318	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAGTTGTATTTAATT	6737	False	NA	NA	False	AATAAA	-16	NA	171238880	171247918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599_171247669_171247758
Isoform_96191_7	chr1	+	1926	9	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	185	junction_1	10.4035751066641	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	6737	False	NA	64	True	GATAAA	-16	NA	171238880	171246326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171245100_171245208_171245433_171245599
Isoform_96192_7	chr1	+	1876	10	FSM	ENSMUSG00000026641.14	ENSMUST00000167546.2	1822	10	-38	-16	-38	2	multi-exon	FALSE	canonical	3	12	junction_1	58.785863758031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	7067	False	NA	65	True	GATAAA	-17	NA	171239210	171246327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171239431_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
Isoform_96195_30	chr1	+	2494	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	23	1	-21	-1	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTATGTTTTTTTT	NA	False	NA	22	True	ATTAAA	-22	NA	171265125	171292170	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
Isoform_96196_219	chr1	+	1902	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	24	592	-20	366	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTGTTGAACATGG	NA	False	NA	16	True	AATAAA	-18	NA	171265126	171291579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
Isoform_96197_12	chr1	+	2515	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	-7	10	-7	-10	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGGAATTTTTTTTAT	NA	False	NA	13	True	ATTAAA	-13	NA	171265095	171292161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
Isoform_96199_32	chr1	+	1890	9	NIC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-21	366	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	81.7212296468916	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTGTTGAACATGG	NA	False	NA	16	True	AATAAA	-18	NA	171265125	171291579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290456_171290509_171290626
Isoform_9620_3	chr10	+	181	1	Intergenic	novelGene_977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAACCCTACAGC	NA	False	NA	NA	False	NA	NA	NA	71453575	71453756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_71453600_71453800
Isoform_96200_4	chr1	+	2502	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	106.999707943527	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGAATTTTTTTTATGT	NA	False	NA	15	True	ATTAAA	-15	NA	171265096	171292163	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290456_171290508_171290626
Isoform_96205_49	chr1	+	4371	33	FSM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	-26	6	1	-1	multi-exon	FALSE	canonical	1	15	junction_16	205.587019193668	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3041	False	NA	9	True	AATAAA	-14	NA	171910372	171949891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938216_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
Isoform_96206_106	chr1	+	4637	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	-15	0	-15	0	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	2749	False	NA	10	True	AATAAA	-15	NA	171910080	171949892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
Isoform_96207_2193	chr1	+	4335	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	287	0	11	0	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	2193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	3051	False	NA	10	True	AATAAA	-15	NA	171910382	171949892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
Isoform_9623_35	chr10	+	5003	1	FSM	ENSMUSG00000053830.5	ENSMUST00000217785.2	1836	1	-119	-3048	-119	3048	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTAGCTTCCTAGTGGG	NA	False	NA	NA	False	TATAAA	-35	NA	72145031	72150034	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_72145000_72150000
Isoform_9624_52	chr10	-	221	1	Intergenic	novelGene_978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGTGTGTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	73091385	73091164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_73091200_73091400
Isoform_96252_728	chr1	+	1904	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	13	0	-5	0	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954334	171962850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
Isoform_96253_143	chr1	+	2391	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	20	-494	2	494	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTCGAGTTCGTAACA	NA	False	NA	22	True	AAGAAA	-19	NA	171954341	171963344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
Isoform_96265_49	chr1	+	2356	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	502	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCGTAACATCATTTCC	NA	False	NA	30	True	AAGAAA	-27	NA	171954334	171963352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
Isoform_96266_91	chr1	+	1847	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954341	171962850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
Isoform_96272_13	chr1	+	2319	7	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	409	junction_5	19.2440466984814	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954333	171962850	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171954416_171956197_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
Isoform_96277_142	chr1	+	2788	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-75	41	-41	0	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975609	172023033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_96278_831	chr1	+	2702	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	13	39	-9	2	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCAAGTTAAAATTATT	NA	False	NA	17	True	ATTAAA	-19	NA	171975697	172023035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_96279_527	chr1	+	3640	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-1	-885	-1	3	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGTGGTATGTGGTC	NA	False	NA	19	True	AGTAAA	-19	NA	171975683	172023959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_9628_1084	chr10	-	5180	1	Intergenic	novelGene_979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1084	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	74555794	74550614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_74550600_74555800
Isoform_96280_38	chr1	+	2823	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-110	41	-76	0	multi-exon	TRUE	canonical	3	418	junction_1	55.9704063816991	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975574	172023033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_96281_101	chr1	+	3686	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-48	-884	-14	2	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTGGTATGTGGT	NA	False	NA	18	True	AGTAAA	-18	NA	171975636	172023958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_96300_299	chr1	+	2835	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	24	0	-12	0	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975732	172023033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_96303_148	chr1	+	3759	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	26	-926	-10	3	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGTGGTATGTGGTC	NA	False	NA	19	True	AGTAAA	-19	NA	171975734	172023959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_96330_302	chr1	+	2402	6	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	29	7	29	-1	intron_retention	FALSE	canonical	3	675	junction_3	48.3553513067582	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGAGGCCTGTTGTGTC	3772	False	NA	12	True	AATAAA	-12	NA	172139962	172147401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859
Isoform_96331_146	chr1	+	2445	6	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	-7	0	-7	0	intron_retention	FALSE	canonical	3	675	junction_3	48.3553513067582	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTGTGTCTTCTCTT	3736	False	NA	19	True	AATAAA	-19	NA	172139926	172147408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859
Isoform_96332_3192	chr1	+	2256	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	15	7	15	-1	multi-exon	FALSE	canonical	3	675	junction_3	44.2329691017408	3192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGAGGCCTGTTGTGTC	3758	False	NA	12	True	AATAAA	-12	NA	172139948	172147401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
Isoform_96334_93	chr1	+	2306	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	-36	8	-36	-2	multi-exon	FALSE	canonical	3	675	junction_3	44.2329691017408	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3707	False	NA	11	True	AATAAA	-11	NA	172139897	172147400	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
Isoform_96353_6	chr1	+	4145	21	NIC	ENSMUSG00000037995.16	novel	636	6	NA	NA	21	-2	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	3.57631094844953	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTCACCTCTCTTT	NA	False	NA	2	True	AATAAA	-14	NA	172309375	172326442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_172309436_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
Isoform_96354_14	chr1	+	4127	21	FSM	ENSMUSG00000037995.16	ENSMUST00000052629.13	4133	21	5	1	0	-1	multi-exon	FALSE	canonical	2	4	junction_16	2.95127091267474	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTCACCTCTCTTTG	NA	False	NA	3	True	AATAAA	-15	NA	172309786	172326443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_172309828_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
Isoform_96355_6	chr1	+	3647	17	ISM	ENSMUSG00000037995.16	ENSMUST00000111235.8	4205	21	7806	2	-967	-1	3prime_fragment	FALSE	canonical	2	4	junction_12	2.97318747306657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTCACCTCTCTTTG	114	False	NA	3	True	AATAAA	-15	NA	172317686	172326443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
Isoform_96356_921	chr1	+	1356	6	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	448.58916616432	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327821	172334947	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133_172334455_172334476
Isoform_96358_29	chr1	+	1390	6	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	448.58916616432	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTCTGGCTGTTTCTAG	NA	False	NA	25	True	AATAAA	-22	NA	172327783	172334943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133_172334455_172334476
Isoform_96359_25	chr1	+	1722	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	-140	4	-140	-4	multi-exon	FALSE	canonical	3	984	junction_4	118.904373342615	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTCTGGCTGTTTCTAG	9901	False	NA	25	True	AATAAA	-22	NA	172327473	172334943	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
Isoform_96360_16	chr1	+	1635	6	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	-76	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	448.58916616432	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTCTGGCTGTTTCTA	9965	False	NA	24	True	AATAAA	-21	NA	172327537	172334942	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133_172334455_172334476
Isoform_96369_28	chr1	+	1817	12	FSM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	88	3	-4	-3	multi-exon	TRUE	canonical	3	18	junction_1	6.26415751889171	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGACAGCTCCACTTCAC	5510	False	NA	3	True	ATTAAA	-16	NA	172348698	172373434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_172348749_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
Isoform_96370_4	chr1	+	1931	12	NIC	ENSMUSG00000026546.17	novel	1908	12	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9.88362030903773	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACAGCTCCACTTCACT	5548	False	NA	4	True	ATTAAA	-17	NA	172348736	172373435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_172348900_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
Isoform_96371_3	chr1	+	1891	12	NIC	ENSMUSG00000026546.17	novel	699	5	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	9.63979355768114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGACAGCTCCACTTCAC	NA	False	NA	3	True	ATTAAA	-16	NA	172353621	172373434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_172353746_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
Isoform_96372_14	chr1	+	2683	10	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	68233	335	-84	-327	3prime_fragment	FALSE	canonical	3	10	junction_1	34.5450144694044	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGATATCATTCTT	NA	False	NA	10	True	NA	NA	NA	173246677	173293271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96373_3	chr1	+	2998	10	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	68233	20	-84	-12	3prime_fragment	FALSE	canonical	3	10	junction_1	34.5450144694044	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAGAAAGTTAGAAAAAA	NA	False	NA	3	True	AATAAA	-21	NA	173246677	173293586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96374_6	chr1	+	2543	9	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-84	-327	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	39.9591588374931	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGATATCATTCTT	NA	False	NA	10	True	NA	NA	NA	173246677	173293271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_173247122_173248136_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96378_7	chr1	+	2568	9	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-85	-327	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.1966539764938	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGATATCATTCTT	NA	False	NA	10	True	NA	NA	NA	173246676	173293271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_173247122_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96380_3	chr1	+	2132	9	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-12	-326	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	38.7828489799293	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGATATCATTCTTC	NA	False	NA	11	True	NA	NA	NA	173248151	173293272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283089_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96383_62	chr1	+	2208	9	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	69723	335	4	-327	3prime_fragment	FALSE	canonical	3	62	junction_1	21.7884000100971	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGATATCATTCTT	NA	False	NA	10	True	NA	NA	NA	173248167	173293271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96385_6	chr1	+	2523	9	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	69730	13	11	-5	3prime_fragment	FALSE	canonical	3	62	junction_1	21.7884000100971	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAGAAAAAAGTTTGTG	NA	False	NA	10	True	AATAAA	-28	NA	173248174	173293593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96389_4	chr1	+	2123	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-3	-329	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	40.7531143169527	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTTGAGATATCATTC	NA	False	NA	8	True	NA	NA	NA	173248160	173293269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_173248253_173255324_173255465_173280393_173280515_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96393_34	chr1	+	2067	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	5	-327	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	29.5379382475888	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGATATCATTCTT	NA	False	NA	10	True	NA	NA	NA	173248168	173293271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96394_5	chr1	+	2391	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	29.5379382475888	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTTAGAAAAAAGTTTG	NA	False	NA	8	True	AATAAA	-26	NA	173248164	173293591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_96397_3	chr1	+	2562	3	NNC	ENSMUSG00000028354.14	novel	724	3	NA	NA	9	1	intron_retention	FALSE	non_canonical	0	0	junction_1	3.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAATAAAAGCTT	NA	False	NA	NA	False	AATATA	-9	NA	174329399	174410119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_174331157_174364610_174364778_174409481
Isoform_96398_6	chr1	+	6429	18	FSM	ENSMUSG00000028354.14	ENSMUST00000030039.13	6442	18	13	0	13	0	multi-exon	TRUE	canonical	1	3	junction_6	3.5625891599357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCAGCTGTGTGC	NA	False	NA	7	True	AATAAA	-16	NA	174329403	174650295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_174331158_174364610_174364778_174409481_174409630_174420626_174420683_174435947_174437519_174440072_174440218_174474671_174474760_174494208_174494271_174521752_174521845_174521997_174522128_174523151_174523299_174526334_174526395_174527121_174527243_174547410_174547504_174571820_174571873_174618823_174618974_174647519_174647602_174648784
Isoform_96404_13	chr1	+	2886	16	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	138.419876543155	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTAAATGCTAATTGG	9769	False	NA	13	True	AATAAA	-21	NA	175708362	175736306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175734171_175734227_175735995
Isoform_96406_459	chr1	+	2826	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	214	4756	1	1	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGGGAAGTTTAAATGC	9767	False	NA	6	True	AATAAA	-14	NA	175708360	175736299	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
Isoform_96411_18	chr1	+	2725	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	116.815132358479	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGCTAATTGGACAAAT	9761	False	NA	19	True	AATAAA	-27	NA	175708354	175736312	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
Isoform_96412_17	chr1	+	2858	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	109.828275047913	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTTTAAATGCTAATT	9767	False	NA	11	True	AATAAA	-19	NA	175708360	175736304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_175708423_175708697_175708794_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
Isoform_96417_391	chr1	+	2983	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	73.1663257550206	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGAAGTTTAAATGCTAA	9767	False	NA	9	True	AATAAA	-17	NA	175708360	175736302	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
Isoform_96427_19	chr1	+	2557	18	FSM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	215	4	215	-4	multi-exon	FALSE	canonical	1	6	junction_6	3.6941925807312	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGAGTTGTTCCGTT	NA	False	NA	3	True	AATAAA	-13	NA	176642440	176847999	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
Isoform_96430_4	chr1	+	3724	2	FSM	ENSMUSG00000063659.12	ENSMUST00000195002.2	394	2	191	-3521	-2	-2	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAATTCCTTGTGTGCTT	NA	False	NA	1	True	AATAAA	-11	NA	177270107	177278324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_177270162_177274654
Isoform_96431_12	chr1	+	3870	3	NIC	ENSMUSG00000063659.12	novel	646	3	NA	NA	-64	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCCTTGTGTGCTTTTT	NA	False	NA	4	True	AATAAA	-14	NA	177269852	177278327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_177270162_177274654_177275343_177275454
Isoform_96434_3	chr1	+	6141	34	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-4935	-29	combination_of_known_junctions	TRUE	canonical	3	59	junction_1	30.240116508781	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTGAAATAAAACACATC	NA	False	NA	NA	False	NA	NA	NA	34291981	34347456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
Isoform_96437_21	chr1	+	4014	6	FSM	ENSMUSG00000026502.14	ENSMUST00000161075.8	2590	6	269	-1693	154	1693	multi-exon	FALSE	canonical	3	14	junction_1	77.2321176713419	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTTTTATAGTTCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	178015251	178080160	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_178015524_178025783_178025857_178065477_178065551_178070177_178070272_178071906_178072049_178076800
Isoform_96440_273	chr1	+	3977	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	116	4709	116	1691	multi-exon	FALSE	canonical	3	163	junction_4	12.7573508221731	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTTTTATAGTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	178015213	178080158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
Isoform_96441_12	chr1	+	4087	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	7	4708	7	1692	multi-exon	FALSE	canonical	3	163	junction_4	12.7573508221731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTTTTATAGTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	178015104	178080159	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
Isoform_96448_110	chr1	+	443	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	23	5	23	-5	multi-exon	FALSE	canonical	3	422	junction_3	43.5150037981793	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGTTTTACATGA	NA	False	NA	15	True	ATTAAA	-18	NA	178146717	178150253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
Isoform_96449_9	chr1	+	781	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	-315	5	-315	-5	multi-exon	FALSE	canonical	3	422	junction_3	43.5150037981793	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGTTTTACATGA	NA	False	NA	15	True	ATTAAA	-18	NA	178146379	178150253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
Isoform_96452_4	chr1	+	805	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-102	2877	-84	165	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGGAAGGACAAGTTAA	NA	False	NA	NA	False	CATAAA	-20	NA	178233565	178309201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
Isoform_96458_5	chr1	+	3637	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-60	3	-42	-3	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGGACTCTGCTTTG	NA	False	NA	5	True	NA	NA	NA	178233607	178312075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
Isoform_96462_125	chr1	+	4564	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	142	3	3	-3	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTCCGAGAATTTAT	NA	False	NA	NA	False	TTTAAA	-14	NA	179374076	179455040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
Isoform_96464_6	chr1	+	3494	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	87	1128	-42	-1128	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGTTATGTTCTGTTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	179374021	179453915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
Isoform_96466_5	chr1	+	4748	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	-46	7	-46	-7	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATGTCTCCGAGAAT	NA	False	NA	NA	False	TTTAAA	-10	NA	179373888	179455036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
Isoform_96469_121	chr1	+	1909	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	36	3	-14	-3	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTCCCCCTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	179495810	179514751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
Isoform_96470_55	chr1	+	1936	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	11	1	11	-1	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTCCCCCTTTTTTGG	NA	False	NA	11	True	AATAAA	-18	NA	179495785	179514753	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
Isoform_96473_3	chr1	+	4447	24	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-2201	-29	combination_of_known_junctions	FALSE	canonical	3	93	junction_7	22.2980328376967	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTGAAATAAAACACATC	NA	False	NA	NA	False	NA	NA	NA	34307449	34347456	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
Isoform_96474_7	chr1	+	6807	37	NIC	ENSMUSG00000026490.19	novel	9161	37	NA	NA	-435	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	17.1587540196301	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATGTGTTGTTTCTTG	NA	False	NA	NA	False	AAGAAA	-15	NA	179787601	179990147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_179788853_179826926_179827019_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
Isoform_96476_17	chr1	+	6708	36	FSM	ENSMUSG00000026490.19	ENSMUST00000097450.10	5160	36	-1133	-415	-495	-7	multi-exon	FALSE	canonical	3	39	junction_2	13.9494714990225	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATGTGTTGTTTCTT	NA	False	NA	NA	False	AAGAAA	-14	NA	179787541	179990146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
Isoform_96480_3	chr1	+	6453	35	FSM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	-1118	-418	-480	-4	multi-exon	FALSE	canonical	3	8	junction_12	17.6801894884082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTGTTGTTTCTTGTC	NA	False	NA	NA	False	AAGAAA	-17	NA	179787556	179990149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
Isoform_96492_360	chr1	+	3657	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-38	254	-33	-252	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	3109	False	NA	16	True	AATAAA	-17	NA	180396455	180428565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
Isoform_96493_2895	chr1	+	3853	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	19	1	19	1	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	2895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3166	False	NA	9	True	ATTAAA	-17	NA	180396512	180428818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
Isoform_96494_3726	chr1	+	3584	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	35	254	35	-252	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	3726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	3182	False	NA	16	True	AATAAA	-17	NA	180396528	180428565	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
Isoform_96495_259	chr1	+	3910	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-37	0	-32	0	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3110	False	NA	10	True	ATTAAA	-18	NA	180396456	180428819	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
Isoform_96577_127	chr1	+	2967	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	192	1	8	-1	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGTCTGAGAATCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	180468906	180518251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
Isoform_96581_6	chr1	+	3474	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	-316	2	-316	-2	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTCTGAGAATCTTA	NA	False	NA	7	True	AATAAA	-17	NA	180468398	180518250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
Isoform_96582_3	chr1	+	2871	14	NIC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	33.5774297256691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGTCTGAGAATCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	180468907	180518251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_180468963_180475865_180475899_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
Isoform_96583_52	chr1	+	3083	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	32.1742478112888	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGTCTGAGAATCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	180468933	180518251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
Isoform_96584_27	chr1	+	3035	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	31.7940595429747	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468915	180518252	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_180468963_180469481_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
Isoform_96588_5	chr1	+	681	4	ISM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	-29	17480	-29	2230	5prime_fragment	FALSE	canonical	3	148	junction_3	19.6468827043885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAACGAGAGCGGCTGC	NA	False	NA	NA	False	NA	NA	NA	180553578	180564289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256
Isoform_96593_131	chr1	+	3438	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	-5	38	-5	-38	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGTCGATGTTTCTGTTA	NA	False	NA	17	True	ATTAAA	-14	NA	180553602	180581731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
Isoform_96597_5	chr1	+	5368	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	-12	-1885	-12	1885	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGAGTGTTTTGCCT	NA	False	NA	NA	False	ATTAAA	-21	NA	180553595	180583654	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
Isoform_96601_3	chr1	+	3214	14	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-6260	1	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	17.3611141354369	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTATGGAATACTTGGTTA	NA	False	NA	14	True	AATAAA	-15	NA	34326275	34347732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
Isoform_96607_580	chr1	+	3185	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	26	2	26	-2	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTTTGGAGTTTTTTG	NA	False	NA	20	True	AATAAA	-20	NA	180678717	180695676	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
Isoform_96609_45	chr1	+	3287	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	-79	5	-79	-5	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGTTTTGGAGTTTT	NA	False	NA	17	True	AATAAA	-17	NA	180678612	180695673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
Isoform_96610_256	chr1	+	3252	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	-45	6	-45	-6	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTGTTTTGGAGTTT	NA	False	NA	16	True	AATAAA	-16	NA	180678646	180695672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
Isoform_96628_3242	chr1	+	2469	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	2	2	2	-2	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	3242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAGAGAGCGAGTCATC	NA	False	NA	19	True	AATAAA	-17	NA	180720674	180726666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
Isoform_96631_187	chr1	+	2782	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	2	-311	2	311	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCAGTGTCTGTTT	NA	False	NA	21	True	NA	NA	NA	180720674	180726979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
Isoform_96649_87	chr1	+	1962	2	FSM	ENSMUSG00000066652.6	ENSMUST00000155546.2	422	2	74	-1614	74	-2	multi-exon	FALSE	canonical	3	1148	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAGAGAGCGAGTCATC	NA	False	NA	19	True	AATAAA	-17	NA	180722096	180726666	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180722407_180725014
Isoform_96659_1627	chr1	+	1549	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	31	0	1	0	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	1627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	47	False	NA	32	True	NA	NA	NA	180731888	180735653	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
Isoform_96675_4	chr1	+	2894	12	NIC	ENSMUSG00000026131.21	novel	23279	98	NA	NA	-3928	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_1	16.6376055174827	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTATGGAATACTTGGTT	NA	False	NA	13	True	AATAAA	-14	NA	34328607	34347731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
Isoform_96678_605	chr1	+	1603	4	FSM	ENSMUSG00000038793.9	ENSMUST00000037361.9	1620	4	18	-1	18	1	multi-exon	FALSE	canonical	3	187	junction_2	33.0790299468141	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGTTTCCTTATTT	NA	False	NA	9	True	AATAAA	-18	NA	180762604	180765966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180762925_180764111_180764359_180764573_180764820_180765176
Isoform_96681_10	chr1	+	1817	3	NIC	ENSMUSG00000038793.9	novel	1620	4	NA	NA	18	0	intron_retention	FALSE	canonical	3	245	junction_1	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180762604	180765965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_180762925_180764111_180764820_180765176
Isoform_96684_4	chr1	+	3392	23	NIC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	-28	1	combination_of_known_junctions	TRUE	canonical	1	4	junction_1	10.7857611983624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCTCTCATGCTTC	NA	False	NA	7	True	AATAAA	-23	NA	180769880	180802669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_180770076_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_96685_3	chr1	+	3423	23	FSM	ENSMUSG00000026519.17	ENSMUST00000027800.15	3306	23	-125	8	-10	1	multi-exon	FALSE	canonical	3	13	junction_1	9.65307299163423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCTCTCATGCTTC	NA	False	NA	7	True	AATAAA	-23	NA	180769898	180802669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_96686_38	chr1	+	3235	23	FSM	ENSMUSG00000026519.17	ENSMUST00000027800.15	3306	23	65	6	-50	3	multi-exon	FALSE	canonical	3	13	junction_1	9.65307299163423	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTCTCATGCTTCTT	NA	False	NA	9	True	AATAAA	-25	NA	180770088	180802671	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_96687_4	chr1	+	3316	23	NIC	ENSMUSG00000026519.17	novel	654	7	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	10.7857611983624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCTCTCATGCTTC	NA	False	NA	7	True	AATAAA	-23	NA	180770135	180802669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_180770255_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_96688_5	chr1	+	3526	23	NIC	ENSMUSG00000026519.17	novel	704	3	NA	NA	-236	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.3524490385799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	8	True	AATAAA	-24	NA	180773234	180802670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_180773563_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_96691_3	chr1	+	2838	16	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	12168	-2	-3864	2	3prime_fragment	FALSE	canonical	3	29	junction_7	8.40211613556701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	8	True	AATAAA	-24	NA	180783767	180802670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_96692_3	chr1	+	2113	9	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	21200	0	5168	0	3prime_fragment	FALSE	canonical	3	35	junction_5	8.24621125123532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGCCTCTCATGCTT	NA	False	NA	6	True	AATAAA	-22	NA	180792799	180802668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_96698_163	chr1	+	3223	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	39	6	39	-6	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAATCTGATTGTTCTAT	NA	False	NA	NA	False	NA	NA	NA	180978534	180996553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
Isoform_96702_263	chr1	+	630	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	43	2595	43	18	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTGATTTCTGAACTC	NA	False	NA	21	True	AATAAA	-14	NA	180978538	180993964	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
Isoform_96707_248	chr1	+	1318	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	39	10	8	-10	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGGATTTCTTGTAT	NA	False	NA	16	True	AATAAA	-24	NA	181952353	181959962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_181952541_181956248_181956318_181958900
Isoform_96712_14	chr1	+	1250	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	52	-479	8	-9	multi-exon	FALSE	canonical	3	66	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGGATTTCTTGTATA	NA	False	NA	17	True	AATAAA	-25	NA	181952353	181959963	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_181952541_181958900
Isoform_96713_18	chr1	+	656	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	53	114	9	0	multi-exon	FALSE	canonical	3	66	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTATGTTTCTTTTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	181952354	181959370	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_181952541_181958900
Isoform_96715_279	chr1	+	4357	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	2	2	2	-2	multi-exon	FALSE	canonical	3	97	junction_1	10.65761582562	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTCCTGGTTTTCC	NA	False	NA	6	True	AATAAA	-19	NA	182236738	182289995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
Isoform_96716_11	chr1	+	4471	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	-111	1	-111	-1	multi-exon	FALSE	canonical	3	97	junction_1	10.65761582562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTTCCTGGTTTTCCT	NA	False	NA	7	True	AATAAA	-20	NA	182236625	182289996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
Isoform_96720_7	chr1	+	4315	18	NIC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	27.8886813369296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGTTTTCCTTTTAA	NA	False	NA	12	True	AATAAA	-25	NA	182236738	182290001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273886_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
Isoform_96723_38	chr1	+	5737	10	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	1	-6	intron_retention	TRUE	non_canonical	0	0	junction_9	172.795604653748	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTGTGCTGAGGTTG	5661	False	NA	46	True	AATAAA	-9	NA	34478979	34488431	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438_34487006_34487050
Isoform_96725_22	chr1	+	1799	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	-349	4386	-349	456	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGCCTAGCTCATTAC	5264	False	NA	26	True	NA	NA	NA	34478582	34484051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
Isoform_96726_567	chr1	+	1425	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	48	4363	1	479	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGTTTGTTTTGTGA	5661	False	NA	49	True	NA	NA	NA	34478979	34484074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
Isoform_96734_28	chr1	+	3032	9	FSM	ENSMUSG00000038576.16	ENSMUST00000153348.8	1898	9	208	-1342	-175	-17	multi-exon	FALSE	canonical	3	16	junction_5	5.55512151082224	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAGAAAACGA	NA	False	NA	NA	False	NA	NA	NA	182591784	182724139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_182591962_182592570_182592754_182660627_182660841_182681521_182681696_182685986_182686176_182714904_182715097_182716332_182716478_182719447_182719831_182722763
Isoform_96736_3	chr1	+	2478	12	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.3382186962438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGGATGGTTGTTACA	NA	False	NA	NA	False	AATAAA	-13	NA	183078590	183104464	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_183079173_183079381_183079469_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343_183103516_183103538
Isoform_96738_85	chr1	+	2416	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	-3	1866	-3	1	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGATGGTTGTTACAC	NA	False	NA	NA	False	AATAAA	-14	NA	183078589	183104465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
Isoform_96739_154	chr1	+	2111	11	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	66.6279971183286	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGATGGTTGTTACACA	NA	False	NA	NA	False	AATAAA	-15	NA	183078872	183104466	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343_183103516_183103538
Isoform_96740_11	chr1	+	2945	11	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	12	568	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	66.6279971183286	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCCTTTCTCATTTC	NA	False	NA	10	True	ATTAAA	-17	NA	183078604	183105032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343_183103516_183103538
Isoform_96741_18	chr1	+	2644	11	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	36	569	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	66.6279971183286	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCCTTTCTCATTTCT	NA	False	NA	11	True	ATTAAA	-18	NA	183078906	183105033	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343_183103516_183103538
Isoform_96744_43	chr1	+	2381	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	2	1	2	-1	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAGTAGTATTTTATT	NA	False	NA	15	True	AATAAA	-26	NA	183170326	183191019	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
Isoform_96746_3	chr1	+	2961	10	NIC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	2	-2	intron_retention	FALSE	canonical	3	59	junction_7	10.3899286467209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170326	183191018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187850_183189427_183189583_183190053
Isoform_96747_10	chr1	+	4404	9	NIC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	59	junction_8	9.73396116696589	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170321	183191018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183187850_183189427_183189583_183190053
Isoform_96749_27	chr1	+	1991	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	51	750	51	-750	multi-exon	FALSE	canonical	3	8	junction_1	4.08248290463863	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTCCCTTGTAAGCTTA	NA	False	NA	NA	False	AATAAA	-25	NA	183766628	183807083	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
Isoform_96751_3	chr1	+	2742	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	51	-1	51	1	multi-exon	FALSE	canonical	3	8	junction_1	4.08248290463863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTACGTGCCTGTCT	NA	False	NA	NA	False	TATAAA	-25	NA	183766628	183807834	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
Isoform_96753_36	chr1	+	4340	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	1	77	1	-77	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCAATCCTGTCTAA	NA	False	NA	11	True	AATAAA	-17	NA	184936314	185016305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
Isoform_96754_4	chr1	+	4429	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	-9	-2	-9	2	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCAGATGCTTTATTCT	NA	False	NA	90	True	TATAAA	-21	NA	184936304	185016384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
Isoform_96755_3	chr1	+	6975	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	1	-2558	1	-1	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGAAAGTAACCATATT	NA	False	NA	NA	False	AATAAA	-18	NA	184936314	185018940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
Isoform_96757_122	chr1	+	4400	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	1	2651	1	-77	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCAATCCTGTCTAA	NA	False	NA	11	True	AATAAA	-17	NA	184936314	185016305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
Isoform_96760_10	chr1	+	6699	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	24	329	24	-314	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCCACTGTTCATACC	NA	False	NA	6	True	AATAAA	-17	NA	184936337	185018627	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
Isoform_96763_218	chr1	+	2207	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	8	-989	0	-7	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	185064376	185089967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
Isoform_96764_45	chr1	+	2229	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	-14	-989	9	-7	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	185064354	185089967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
Isoform_96767_193	chr1	+	2162	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	31	7	0	-7	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	185064376	185089967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
Isoform_96768_43	chr1	+	2184	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	9	7	9	-7	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	185064354	185089967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
Isoform_96770_19	chr1	+	2080	9	NIC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	92.0101047439899	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	185064376	185089967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_185064461_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
Isoform_96771_19	chr1	+	2039	8	FSM	ENSMUSG00000026617.17	ENSMUST00000110965.2	1046	8	-4	-989	3	-7	multi-exon	FALSE	canonical	3	19	junction_1	90.255872102482	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	185064372	185089967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_185064461_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
Isoform_96807_5626	chr1	+	4886	32	FSM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	15	5	1	-5	multi-exon	FALSE	canonical	3	1945	junction_14	331.30791485156	5626	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095255	185160552	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
Isoform_9687_5	chr10	+	186	1	Intergenic	novelGene_980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTTAAAAAAAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	74638625	74638811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_74638600_74638800
Isoform_96879_3	chr1	+	2771	4	FSM	ENSMUSG00000026614.8	ENSMUST00000061093.7	5836	4	57	3008	57	-6	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAACTGTATTGAGAGAA	NA	False	NA	NA	False	AATAAA	-24	NA	185187101	185197951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273
Isoform_9688_3	chr10	-	174	1	Intergenic	novelGene_981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGCAAAATTAGA	NA	False	NA	NA	False	NA	NA	NA	74750102	74749928	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_74749900_74750100
Isoform_96881_7	chr1	+	853	7	ISM	ENSMUSG00000026126.16	ENSMUST00000027302.14	1559	15	11680	6	-1275	-6	3prime_fragment	FALSE	canonical	2	6	junction_1	3.74165738677394	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATAGGGGCTTTGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	34510525	34512859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_34510641_34510721_34510800_34510892_34510983_34511183_34511273_34511843_34512050_34512415_34512491_34512659
Isoform_96885_13	chr1	+	5305	6	FSM	ENSMUSG00000039210.17_ENSMUSG00000104394.3	ENSMUST00000097443.10	2411	6	14	-2908	0	-1618	multi-exon	FALSE	canonical	2	13	junction_5	28.9924128005932	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAATGTGGTGGAGT	NA	False	NA	NA	False	NA	NA	NA	186947718	186970936	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966828
Isoform_96887_110	chr1	+	4810	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	12	-275	1	-2	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCGTTGTTGGTGTGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	186947719	187083899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
Isoform_9689_5	chr10	-	200	1	Intergenic	novelGene_982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACGTTGAAAGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	74924950	74924750	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_74924800_74925000
Isoform_96890_12	chr1	+	4709	8	FSM	ENSMUSG00000039210.17	ENSMUST00000110943.9	4702	8	-9	2	2	-2	multi-exon	FALSE	canonical	3	14	junction_6	24.9038969166003	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCGTTGTTGGTGTGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	186947709	187083899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187073683_187073773_187080553
Isoform_96891_3	chr1	+	514	3	ISM	ENSMUSG00000026126.16	ENSMUST00000027302.14	1559	15	12971	0	16	0	3prime_fragment	FALSE	canonical	3	11	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGCTTTGTTCCAGTGA	NA	False	NA	NA	False	AATAAA	-23	NA	34511816	34512865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_34512050_34512415_34512491_34512659
Isoform_96892_4	chr1	+	3639	13	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	-85	24720	-85	-1	5prime_fragment	FALSE	canonical	3	11	junction_2	5.22812904711937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATATTGTTGGATTGTA	NA	False	NA	1	True	AATAAA	-14	NA	189460379	189584172	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
Isoform_96893_27	chr1	+	3568	13	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	-12	24718	-12	1	5prime_fragment	FALSE	canonical	3	11	junction_2	5.22812904711937	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGTTGGATTGTAGT	NA	False	NA	3	True	AATAAA	-16	NA	189460452	189584174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
Isoform_96894_3	chr1	+	4297	19	FSM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	-11	6460	-11	167	multi-exon	FALSE	canonical	3	10	junction_17	4.78713553878169	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTTCTGTGAGTTATTA	NA	False	NA	NA	False	NA	NA	NA	189460453	189602432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
Isoform_96895_3	chr1	+	4354	19	FSM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	11	6381	4	246	multi-exon	FALSE	canonical	3	10	junction_17	4.78713553878169	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGACTGATCTGCAGTGT	NA	False	NA	NA	False	AATATA	-22	NA	189460475	189602511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
Isoform_96896_4	chr1	+	2882	7	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	121556	6462	4781	165	3prime_fragment	FALSE	canonical	3	10	junction_5	3.54729944229879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGTTCTGTGAGTTAT	NA	False	NA	NA	False	NA	NA	NA	189582020	189602430	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
Isoform_96898_6	chr1	+	3163	9	FSM	ENSMUSG00000026634.17	ENSMUST00000110899.7	3673	9	50	460	50	-460	multi-exon	FALSE	canonical	3	10	junction_1	60.2136820000239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATTCCAGTTGTTT	NA	False	NA	22	True	AATAAA	-22	NA	190660738	190678699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_190660915_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
Isoform_969_1783	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1783	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_SIRV6001_+_0_6000
Isoform_9690_15	chr10	-	196	1	Intergenic	novelGene_983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATACTTCAAATGAAAG	NA	False	NA	NA	False	NA	NA	NA	75033248	75033052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75033100_75033200
Isoform_96902_41	chr1	+	3196	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	48	470	48	-470	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTTACTCATTTATT	NA	False	NA	12	True	AATAAA	-12	NA	190660736	190678689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
Isoform_96904_12	chr1	+	3663	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	50	1	50	-1	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGTGGACAGAGAAGT	NA	False	NA	15	True	AATAAA	-17	NA	190660738	190679158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
Isoform_96906_44	chr1	+	3143	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	109	462	109	-462	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATTTATTCCAGTTGT	NA	False	NA	20	True	AATAAA	-20	NA	190660797	190678697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
Isoform_96908_5	chr1	+	3035	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	84	-468	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	64.6948882944284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTACTCATTTATTCC	NA	False	NA	14	True	AATAAA	-14	NA	190660772	190678691	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190675026_190675085_190675973_190676138_190677136
Isoform_9691_8	chr10	+	3204	1	Genic_Genomic	ENSMUSG00000033444.15	novel	NA	NA	NA	NA	-19	-28661	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75047885	75051089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_75047900_75051100
Isoform_96914_15	chr1	+	2113	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	109	-1166	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	62.1285697861577	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660797	190677993	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_190660956_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
Isoform_96916_40	chr1	+	3031	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	2	-466	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTCATTTATTCCAG	NA	False	NA	16	True	AATAAA	-16	NA	190661051	190678693	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
Isoform_96918_6	chr1	+	1836	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	0	-1694	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATGTTTAAAGAACTTT	NA	False	NA	NA	False	AAGAAA	-42	NA	190661018	190677465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
Isoform_96923_4	chr1	+	838	5	FSM	ENSMUSG00000062510.13	ENSMUST00000139340.8	837	5	-1	0	-1	0	multi-exon	FALSE	canonical	2	3	junction_4	96.9442494426565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTTTCTGAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	190795219	190809136	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190808813
Isoform_96925_318	chr1	+	2968	6	FSM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	-6	1917	1	-1917	multi-exon	FALSE	canonical	3	202	junction_5	16.7164589551735	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTTTTACTGTATTT	NA	False	NA	15	True	AATAAA	-19	NA	190795221	190816754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367
Isoform_96934_6	chr1	+	748	3	FSM	ENSMUSG00000026630.10	ENSMUST00000027943.6	801	3	53	0	-5	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTCCTTTGTCCATCT	NA	False	NA	NA	False	AATAAA	-12	NA	190830574	190841140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_190830725_190832924_190833030_190840647
Isoform_96935_8	chr1	+	548	2	FSM	ENSMUSG00000073478.7	ENSMUST00000139056.3	716	2	20	148	0	-148	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTTCAGTTTCTTCT	NA	False	NA	11	True	GATAAA	-17	NA	190956670	190957884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_190956740_190957405
Isoform_96936_114	chr1	+	2223	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	21	2	21	-2	multi-exon	TRUE	canonical	3	75	junction_7	21.6248156769306	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCCTGCTACCTTTGT	NA	False	NA	4	True	AATAAA	-13	NA	191058129	191083109	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
Isoform_96937_42	chr1	+	2579	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	34	-367	34	367	multi-exon	FALSE	canonical	3	75	junction_7	21.6248156769306	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCTGTGTTTTGTTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	191058142	191083478	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
Isoform_96942_76	chr1	+	4186	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-3	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.9688562884032	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTTACCTTTTTTT	8296	False	NA	28	True	AATAAA	-17	NA	191307850	191354788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
Isoform_96944_354	chr1	+	4162	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-3	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.9688562884032	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8316	False	NA	26	True	AATAAA	-15	NA	191307870	191354786	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353908_191353955
Isoform_96946_32	chr1	+	5178	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.9688562884032	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGTGTGAAAGTAACTG	8317	False	NA	5	True	AATAAA	-15	NA	191307871	191355803	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353908_191353955
Isoform_96948_12	chr1	+	3775	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	127	1445	1	-503	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGACTAGTGTGGACTT	8320	False	NA	NA	False	AATGAA	-18	NA	191307874	191354355	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
Isoform_96949_20	chr1	+	3362	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	139	1846	-1	196	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTGTCTCACACTTAG	8332	False	NA	NA	False	NA	NA	NA	191307886	191353954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
Isoform_9695_33	chr10	+	176	1	Intergenic	novelGene_984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAAAAATTTTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	75299803	75299979	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_75299800_75300000
Isoform_9696_27	chr7	+	157	1	Intergenic	novelGene_9806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	7140716	7140873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_7140700_7140900
Isoform_96960_9	chr1	+	2954	18	FSM	ENSMUSG00000037461.11	ENSMUST00000194785.2	4002	18	1	1047	1	53	multi-exon	FALSE	canonical	2	19	junction_1	67.3081022079613	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGACAGGGTTTCTCT	8320	False	NA	NA	False	AATAAA	-23	NA	191307874	191353811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191308064_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
Isoform_96965_5	chr1	+	5925	9	NIC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	-9	-1293	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	32.5998466254061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATGCTTTTAATTC	NA	False	NA	NA	False	AATAAA	-19	NA	191450129	191515074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_191450318_191450540_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
Isoform_96966_3	chr1	+	7183	10	NNC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	38.5422647601241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGTGGCCTTGTTCTTA	NA	False	NA	8	True	AATAAA	-17	NA	191450129	191516366	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_191450318_191450540_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494_191513243_191513276
Isoform_96970_25	chr1	+	5757	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	184	1292	-9	-1292	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGCTTTTAATTCT	NA	False	NA	NA	False	AATAAA	-20	NA	191450129	191515075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
Isoform_96971_14	chr1	+	7047	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	184	2	-9	-2	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGTGGCCTTGTTCTT	NA	False	NA	7	True	AATAAA	-16	NA	191450129	191516365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
Isoform_96975_7	chr1	+	5906	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110856.8	2792	8	-128	-2986	-128	-1292	multi-exon	FALSE	canonical	3	42	junction_1	20.3610271983372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGCTTTTAATTCT	NA	False	NA	NA	False	AATAAA	-20	NA	191450372	191515075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
Isoform_96976_15	chr1	+	7001	9	NNC	ENSMUSG00000026623.17	novel	2792	8	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	33.6823395861986	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGTGGCCTTGTTCTT	NA	False	NA	7	True	AATAAA	-16	NA	191450533	191516365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494_191513243_191513276
Isoform_96981_1337	chr1	+	3155	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	71	1	5	-1	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	28	True	TATAAA	-39	NA	191553626	191565161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
Isoform_96984_94	chr1	+	3183	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	43	1	-23	-1	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	28	True	TATAAA	-39	NA	191553598	191565161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
Isoform_96991_250	chr1	+	3134	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	134.022233915397	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	28	True	TATAAA	-39	NA	191553626	191565161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
Isoform_97_481	ERCC-00092	+	1107	1	FSM	ERCC-00092A	DQ459425	1108	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00092_+_0_1100
Isoform_9700_5	chr10	+	175	1	Intergenic	novelGene_985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGAGAGAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	75374756	75374931	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_75374800_75374900
Isoform_97002_39	chr1	+	2179	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	-78	3143	-78	931	multi-exon	FALSE	canonical	3	88	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTGCTTTTCTTCCC	NA	False	NA	3	True	AATAAA	-13	NA	191638800	191642216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191639726_191640962
Isoform_97003_64	chr1	+	2083	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	17	3144	17	930	multi-exon	FALSE	canonical	3	88	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTCTGCTTTTCTTCC	NA	False	NA	2	True	AATAAA	-12	NA	191638895	191642215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191639726_191640962
Isoform_97005_17	chr1	+	5164	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	21	59	21	-59	multi-exon	FALSE	canonical	3	88	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTTCTTCTCATT	NA	False	NA	19	True	TATAAA	-20	NA	191638899	191645300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191639726_191640962
Isoform_97006_32	chr1	+	5199	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	49	-4	49	4	multi-exon	FALSE	canonical	3	88	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTGCATGTGGCCC	NA	False	NA	31	True	AATAAA	-18	NA	191638927	191645363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191639726_191640962
Isoform_97007_15	chr1	+	5309	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	-78	13	-78	-13	multi-exon	FALSE	canonical	3	88	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTCTAATTTCTATTTT	NA	False	NA	14	True	AATAAA	-1	NA	191638800	191645346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_191639726_191640962
Isoform_97008_3	chr1	+	2968	11	NIC	ENSMUSG00000037509.22	novel	1206	6	NA	NA	24	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8.28009661779378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGACCTGGCTGCTGGT	NA	False	NA	3	True	CATAAA	-12	NA	34789685	34851813	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_34790105_34832306_34832444_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
Isoform_9701_3	chr10	+	3099	1	Antisense	novelGene_ENSMUSG00000046807.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75387336	75390435	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_75387300_75390400
Isoform_97010_3	chr1	+	2609	6	ISM	ENSMUSG00000037509.22	ENSMUST00000047664.16	3287	10	37	4093	0	-2	5prime_fragment	FALSE	canonical	3	14	junction_5	6.40624695121879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGGTGGAAAGTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	34840821	34848297	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722
Isoform_97012_44	chr1	+	2680	10	FSM	ENSMUSG00000037509.22	ENSMUST00000047664.16	3287	10	37	570	0	0	multi-exon	FALSE	canonical	3	11	junction_6	6.35959467611297	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTGGTCAGCTGG	NA	False	NA	10	True	CATAAA	-19	NA	34840821	34851820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
Isoform_97014_3	chr1	+	4072	7	NNC	ENSMUSG00000037509.22	novel	3287	10	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	10.0111049451208	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGCTGCTGGTCAGC	NA	False	NA	7	True	CATAAA	-16	NA	34840821	34851817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34846852_34848777_34849636_34850166_34850245_34850758
Isoform_97016_53	chr1	+	4094	8	FSM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	17	2	17	-2	multi-exon	FALSE	canonical	3	26	junction_1	3.81190401832181	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAATATAAAGCTAG	NA	False	NA	NA	False	AATAAA	-8	NA	192835435	192854329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192850140_192850824_192850944_192851589
Isoform_9702_10	chr10	-	171	1	Intergenic	novelGene_986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAAGGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	75403111	75402940	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75402900_75403100
Isoform_97020_15	chr1	+	2253	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	5	-1	-1	1	multi-exon	FALSE	canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCCTGAAATCATTTGA	966	False	NA	NA	False	AATAAA	-18	NA	192855892	192858609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_192856089_192856552
Isoform_97022_8	chr1	+	3648	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	5	-1396	-1	-136	multi-exon	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGACATGCCTCTCTTCC	966	False	NA	15	True	NA	NA	NA	192855892	192860004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_192856089_192856552
Isoform_97025_4	chr1	+	2568	2	FSM	ENSMUSG00000079144.8	ENSMUST00000193307.2	705	2	-158	-1705	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCCTGAAATCATTTG	967	False	NA	NA	False	AATAAA	-17	NA	192855893	192858608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_192856406_192856552
Isoform_97026_3	chr1	+	4042	23	FSM	ENSMUSG00000026639.19	ENSMUST00000016315.16	4056	23	13	1	13	-1	multi-exon	TRUE	canonical	0	0	junction_10	2.42405302290425	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTTTGCATTAAGTC	NA	False	NA	NA	False	AATAAA	-40	NA	192984313	193026185	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_192984450_192985795_192985856_192986743_192986899_193002739_193002855_193003360_193003435_193006044_193006237_193007867_193007932_193008196_193008382_193010201_193010323_193010942_193011132_193012347_193012504_193013055_193013253_193013603_193013716_193014430_193014810_193016487_193016649_193016723_193016942_193017156_193017355_193017664_193017810_193021113_193021322_193021696_193021839_193022192_193022370_193023055_193023210_193025681
Isoform_97029_7	chr1	+	2349	8	FSM	ENSMUSG00000016494.10	ENSMUST00000016638.8	2454	8	100	5	14	-5	multi-exon	FALSE	canonical	0	0	junction_4	1.35526185435788	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGATGTGGCCCTA	1121	False	NA	NA	False	AATAAA	-38	NA	194621226	194643582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_194621353_194630146_194630315_194631612_194631873_194633246_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642243
Isoform_9703_4	chr10	-	438	1	Intergenic	novelGene_987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9974	False	NA	NA	False	NA	NA	NA	75424485	75424047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75424000_75424500
Isoform_97031_721	chr1	+	3293	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-16	2	0	1	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	721	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTGTCTCATTGTGACT	NA	False	NA	16	True	ATTAAA	-16	NA	34889056	34918659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
Isoform_9704_49	chr10	+	176	1	Intergenic	novelGene_988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGAATCTGTG	7145	False	NA	NA	False	NA	NA	NA	75437197	75437373	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_75437200_75437400
Isoform_97042_792	chr1	+	3735	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	-17	1	-17	-1	multi-exon	FALSE	canonical	3	381	junction_1	0	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGCTGTGGTCTGTG	1746	False	NA	19	True	AATAAA	-14	NA	36107463	36145526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36108266_36142593
Isoform_97048_35	chr1	+	3794	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	-75	0	-75	0	multi-exon	FALSE	canonical	3	381	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGCTGTGGTCTGTGG	1688	False	NA	20	True	AATAAA	-15	NA	36107405	36145527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36108266_36142593
Isoform_97055_46	chr1	+	2178	7	FSM	ENSMUSG00000037447.17	ENSMUST00000115032.8	4640	7	0	2462	0	1	multi-exon	FALSE	canonical	3	8	junction_1	6.46572158042361	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGTACAGCACTG	NA	False	NA	NA	False	AATAAA	-26	NA	36346834	36359610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36346918_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
Isoform_97056_6	chr1	+	2052	6	FSM	ENSMUSG00000037447.17	ENSMUST00000116629.9	2056	6	2	2	2	0	multi-exon	FALSE	canonical	3	6	junction_2	8.63481325796916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTGGGGTGTACAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	36346836	36359607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36346918_36355289_36355409_36356690_36356744_36357164_36357263_36357568_36357735_36358072
Isoform_97057_9	chr1	+	2174	7	FSM	ENSMUSG00000037447.17	ENSMUST00000126413.8	870	7	21	-1325	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.27479439153761	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGGTGTACAGCACT	NA	False	NA	NA	False	AATAAA	-25	NA	36346834	36359609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36346918_36355292_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
Isoform_97058_3	chr1	+	1776	2	ISM	ENSMUSG00000001138.14	ENSMUST00000154225.2	559	3	-1198	963	32	-102	5prime_fragment	FALSE	canonical	3	67	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTGAAAAAAGAAATGTT	NA	False	NA	NA	False	AATAAA	-1	NA	36550979	36558553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_36552235_36558032
Isoform_97059_27	chr1	+	4136	8	NNC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	32	-1022	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	25.5957585772107	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACGGTGTGAAGACTGG	NA	False	NA	27	True	NA	NA	NA	36550979	36566296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_36552235_36558032_36558177_36559161_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
Isoform_97061_117	chr1	+	4142	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	29	1022	29	-1022	multi-exon	FALSE	canonical	3	58	junction_3	12.7918979460135	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACGGTGTGAAGACTGG	NA	False	NA	27	True	NA	NA	NA	36550976	36566296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
Isoform_97066_4	chr1	+	4460	7	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	0	-1024	intron_retention	FALSE	canonical	3	67	junction_1	11.3968806648525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATACGGTGTGAAGACT	NA	False	NA	25	True	NA	NA	NA	36550947	36566294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_36552235_36558032_36558177_36559158_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
Isoform_9707_12	chr10	-	179	1	Intergenic	novelGene_989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTGGTGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	75578918	75578739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75578700_75578900
Isoform_97070_2240	chr1	+	496	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	76	293	-50	2	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTAGTCTTATGTCTA	NA	False	NA	25	True	AATAAA	-30	NA	36730640	36732469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
Isoform_97071_61	chr1	+	571	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	-1	295	-1	0	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGCTAGTCTTATGTC	NA	False	NA	23	True	AATAAA	-28	NA	36730563	36732467	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
Isoform_97074_36	chr1	+	778	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	87	0	-39	0	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCTAAAAATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	36730651	36732762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
Isoform_97075_68	chr1	+	633	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	87	145	-39	-145	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGCTGTTATTTGTT	NA	False	NA	9	True	TTTAAA	-16	NA	36730651	36732617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
Isoform_97080_4	chr1	+	1252	6	FSM	ENSMUSG00000026117.11	ENSMUST00000190128.2	1338	6	87	-1	87	1	multi-exon	FALSE	canonical	3	25	junction_2	6.93974062915899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTATTCTCATCTTCC	NA	False	NA	2	True	AATAAA	-15	NA	36818151	36821897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
Isoform_97082_4	chr1	+	1190	6	FSM	ENSMUSG00000026117.11	ENSMUST00000190128.2	1338	6	149	-1	149	1	multi-exon	FALSE	canonical	3	25	junction_2	6.93974062915899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTATTCTCATCTTCC	NA	False	NA	2	True	AATAAA	-15	NA	36818213	36821897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
Isoform_97085_6	chr1	+	1280	8	NIC	ENSMUSG00000050122.20	novel	4717	27	NA	NA	-39	0	combination_of_known_junctions	TRUE	canonical	2	12	junction_1	16.9440857179231	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGATTTCTCCCTCA	NA	False	NA	5	True	AATAAA	-22	NA	37139709	37180417	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_37139908_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
Isoform_97087_944	chr1	+	2435	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	72	0	-1	0	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878117	4916962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
Isoform_97088_399	chr1	+	2475	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	28	4	21	-4	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATTGCTTTATATAGTAC	NA	False	NA	17	True	AATAAA	-18	NA	4878073	4916958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
Isoform_9709_5	chr10	-	2131	1	Genic_Genomic	ENSMUSG00000001666.9_ENSMUSG00000092360.2	novel	NA	NA	NA	NA	52	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGACTTCTTTGCTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	75609196	75607065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_75607100_75609200
Isoform_97090_34	chr1	+	2680	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	-163	-10	-128	10	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTACTGTTTCTTTTTTCT	NA	False	NA	31	True	AATAAA	-32	NA	4877882	4916972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
Isoform_97091_33	chr1	+	2333	8	FSM	ENSMUSG00000025903.15	ENSMUST00000115529.8	930	8	-16	-1387	-1	0	multi-exon	FALSE	canonical	3	36	junction_6	273.277312991617	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878117	4916962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4911178_4911356_4915185
Isoform_97092_20	chr1	+	2372	8	FSM	ENSMUSG00000025903.15	ENSMUST00000115529.8	930	8	-60	-1382	21	-5	multi-exon	FALSE	canonical	3	36	junction_6	273.277312991617	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGATTGCTTTATATAGTA	NA	False	NA	16	True	AATAAA	-17	NA	4878073	4916957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4911178_4911356_4915185
Isoform_97098_3	chr1	+	5619	26	NNC	ENSMUSG00000026113.18	novel	5691	26	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	3.43021865192294	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGTCTCACTTGATTC	NA	False	NA	NA	False	AATAAA	-17	NA	37338977	37449815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_37339200_37396423_37396486_37396895_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411501_37416658_37416843_37417921_37418141_37419002_37419142_37422419_37422453_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207_37448646_37448691
Isoform_97101_5	chr1	+	2326	4	ISM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	45	1	-2	-1	intron_retention	FALSE	canonical	3	315	junction_1	76.4475128583149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTGACTGTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	37469264	37478064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242
Isoform_97102_25	chr1	+	2248	5	ISM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	45	4	-2	-4	intron_retention	FALSE	canonical	3	315	junction_1	77.3413699128739	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCTGTGACTGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	37469264	37478061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457
Isoform_97103_150	chr1	+	1044	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	46	4	-1	-4	multi-exon	FALSE	canonical	3	315	junction_1	76.7739539166767	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCTGTGACTGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	37469265	37478061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
Isoform_97105_7	chr1	+	1067	6	NIC	ENSMUSG00000026111.16	novel	1094	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	192.902669758612	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469242	37478065	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_37469364_37470377_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
Isoform_97107_14	chr1	+	1107	6	NIC	ENSMUSG00000026111.16	novel	1179	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	188.928134485047	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469264	37478068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_37469419_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
Isoform_9711_8	chr10	+	232	1	Intergenic	novelGene_990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTCTACAACACAAAATA	NA	False	NA	NA	False	AATAAA	-5	NA	75632181	75632413	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_75632200_75632400
Isoform_97111_18	chr1	+	2459	5	ISM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	14	144	-2	-4	intron_retention	FALSE	canonical	3	180	junction_1	134.998148135447	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCTGTGACTGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	37469264	37478061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457
Isoform_97112_146	chr1	+	1256	6	FSM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	14	144	-2	-4	multi-exon	FALSE	canonical	3	180	junction_1	129.498416978741	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCTGTGACTGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	37469264	37478061	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
Isoform_97116_56	chr1	+	1492	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	-9	2	-9	-2	multi-exon	FALSE	canonical	3	65	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCCTTTTCCTTAA	NA	False	NA	13	True	ATTAAA	-13	NA	37911277	37915307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_37911407_37913944
Isoform_97118_4	chr1	+	4235	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	-10	-2740	-10	2740	multi-exon	FALSE	canonical	3	65	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATATTTGCTTTGCTATG	NA	False	NA	NA	False	AATAAA	-15	NA	37911276	37918049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_37911407_37913944
Isoform_97119_7	chr1_GL456212v1_random	+	167	1	Intergenic	novelGene_5933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTGAACCGGAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	23454	23621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_GL456212v1_random_+_23500_23600
Isoform_97126_5	chr1	-	188	1	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTACTCTGACC	NA	False	NA	NA	False	NA	NA	NA	51749826	51749638	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_51749600_51749800
Isoform_97127_15	chr1	+	3002	1	Antisense	novelGene_ENSMUSG00000018417.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTTTGAGCTCTGCTGG	NA	False	NA	NA	False	NA	NA	NA	51838271	51841273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_51838300_51841300
Isoform_97128_8	chr1	+	177	1	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGCCAATATAGAA	NA	False	NA	NA	False	NA	NA	NA	52055905	52056082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_52055900_52056100
Isoform_97137_3	chr1	-	3713	1	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	1827	False	NA	NA	False	NA	NA	NA	52471108	52467395	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_52467400_52471100
Isoform_97139_8	chr1	+	3695	1	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-6	NA	7456346	7460041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_7456300_7460000
Isoform_97140_255	chr12	+	177	1	Intergenic	novelGene_2893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	117486947	117487124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_117486900_117487100
Isoform_97144_5	chr1	-	2120	1	Genic_Genomic	ENSMUSG00000043629.13	novel	NA	NA	NA	NA	-270	-26303	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGTAAAGAAAAGAA	NA	False	NA	NA	False	AAGAAA	-34	NA	52992779	52990659	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_52990700_52992800
Isoform_97145_22	chr1	+	177	1	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	53206451	53206628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_53206500_53206600
Isoform_97146_26	chr1	-	3413	3	Genic_Genomic	ENSMUSG00000026098.14	novel	3054	13	NA	NA	2	1745	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6057	False	NA	NA	False	NA	NA	NA	53336172	53332706	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_53333140_53333164_53335555_53335582
Isoform_9715_220	chr10	+	176	1	Intergenic	novelGene_991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75679958	75680134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_75680000_75680100
Isoform_97150_4	chr1	+	171	1	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAATGATGGT	NA	False	NA	NA	False	NA	NA	NA	53461864	53462035	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_53461900_53462000
Isoform_97154_3	chr1	-	3096	1	FSM	ENSMUSG00000073678.5	ENSMUST00000189506.2	3025	1	-75	4	-18	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATACAAAAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	54596861	54593765	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_54593800_54596900
Isoform_97156_71	chr1	-	175	1	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54926535	54926360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_54926400_54926500
Isoform_97158_90	chr1	+	175	1	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	54987092	54987267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_54987100_54987300
Isoform_97159_44	chr1	-	173	1	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAACATTT	NA	False	NA	NA	False	NA	NA	NA	54987452	54987279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_54987300_54987500
Isoform_9716_8	chr10	-	333	1	Intergenic	novelGene_992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	75683155	75682822	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75682800_75683200
Isoform_97160_9	chr1	+	5264	1	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	912	False	NA	NA	False	NA	NA	NA	55035004	55040268	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_55035000_55040300
Isoform_97161_7	chr1	+	174	1	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCTATACAA	NA	False	NA	NA	False	NA	NA	NA	55081216	55081390	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_55081200_55081400
Isoform_9717_76	chr10	-	231	1	Intergenic	novelGene_993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCAGCACTTGGGAGGCA	NA	False	NA	NA	False	NA	NA	NA	75683156	75682925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75682900_75683200
Isoform_97174_17	chr1	+	185	1	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTTTTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55144251	55144436	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_55144300_55144400
Isoform_97176_9	chr1	+	813	1	NIC	ENSMUSG00000025979.14	novel	1816	7	NA	NA	0	-13284	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCACCCACG	NA	False	NA	NA	False	NA	NA	NA	55170445	55171258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_55170400_55171300
Isoform_97178_12	chr1	+	174	1	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATGATAAAAACAG	8753	False	NA	NA	False	NA	NA	NA	55245976	55246150	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_55246000_55246200
Isoform_97182_99	chr1	+	2843	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	41	8410	41	-8410	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTGGTTACACTCATT	NA	False	NA	27	True	ATTAAA	-27	NA	55276376	55279219	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_55276400_55279200
Isoform_97187_12	chr1	-	173	1	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAACAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	55624225	55624052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_55624100_55624200
Isoform_97188_7	chr1	+	1673	1	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56857922	56859595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_56857900_56859600
Isoform_97189_3	chr1	-	5606	1	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTGCCTTACCTATAA	2029	False	NA	NA	False	NA	NA	NA	57394666	57389060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_57389100_57394700
Isoform_97192_3	chr1	-	1288	1	NIC	ENSMUSG00000048495.17	novel	1847	8	NA	NA	9	-11990	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAACAAACAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	57445621	57444333	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_57444300_57445600
Isoform_97195_3	chr1	-	854	1	NIC	ENSMUSG00000054770.17	novel	2114	4	NA	NA	-5	-5602	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATTAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	58009216	58008362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_58008400_58009200
Isoform_97197_11	chr1	-	4236	1	NIC	ENSMUSG00000054770.17	novel	5016	10	NA	NA	14503	-36616	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1662	False	NA	NA	False	NA	NA	NA	58043612	58039376	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_58039400_58043600
Isoform_97198_7	chr1	-	198	1	Antisense	novelGene_ENSMUSG00000026039.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTTTAATTTGTA	NA	False	NA	NA	False	AATAAA	-6	NA	58065247	58065049	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_58065000_58065200
Isoform_97201_21	chr1	+	5392	1	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTGGCTCCATTTCTC	NA	False	NA	NA	False	NA	NA	NA	9006615	9012007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_9006600_9012000
Isoform_97203_4	chr1	+	176	1	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATATTCCTACCCC	NA	False	NA	NA	False	NA	NA	NA	58077550	58077726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_58077600_58077700
Isoform_97204_117	chr1	-	214	1	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATCCAGTGGTATTCTT	NA	False	NA	NA	False	NA	NA	NA	58189415	58189201	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_58189200_58189400
Isoform_97205_3	chr1	-	176	1	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	58303407	58303231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_58303200_58303400
Isoform_97206_19	chr1	-	165	1	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTGGAGCGAGCAG	4361	False	NA	NA	False	NA	NA	NA	58441183	58441018	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_58441000_58441200
Isoform_97210_5	chr1	-	1856	1	Antisense	novelGene_ENSMUSG00000051223.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGACTTTGAATACTT	NA	False	NA	NA	False	NA	NA	NA	58446511	58444655	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_58444700_58446500
Isoform_9722_3	chr10	-	213	1	Intergenic	novelGene_994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTCTTTGTGTCAATTA	NA	False	NA	NA	False	NA	NA	NA	75708733	75708520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75708500_75708700
Isoform_97220_32	chr1	+	183	1	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	9024548	9024731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_9024500_9024700
Isoform_97222_5	chr1	+	177	1	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5267	False	NA	NA	False	NA	NA	NA	58510415	58510592	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_58510400_58510600
Isoform_97226_194	chr13	+	185	2	Intergenic	novelGene_3117	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62282375	62653913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_62282520_62653872
Isoform_97227_524	chr1	+	1721	1	FSM	ENSMUSG00000059647.6	ENSMUST00000081455.6	552	1	-91	-1078	-91	1078	mono-exon	FALSE	NA	NA	NA	NA	NA	524	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAG	NA	False	NA	NA	False	AATAAA	-17	NA	58685755	58687476	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58685800_58687500
Isoform_97228_41	chr1	-	177	1	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAACAAAAAACAA	2156	False	NA	NA	False	NA	NA	NA	58802631	58802454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_58802500_58802600
Isoform_97229_224	chr1	+	198	1	FSM	ENSMUSG00000102719.2	ENSMUST00000194726.2	3841	1	3098	545	3098	-545	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATGGAGTTAGGAATT	8431	False	NA	NA	False	NA	NA	NA	58840039	58840237	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_58840000_58840200
Isoform_9723_29	chr10	+	4646	1	Antisense	novelGene_ENSMUSG00000000902.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-28	NA	75751393	75756039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_75751400_75756000
Isoform_97233_3	chr1	+	2268	2	Genic_Genomic	ENSMUSG00000097573.3	novel	2307	1	NA	NA	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTAGTTCATTTCTAAA	8039	False	NA	NA	False	AATAAA	-13	NA	59158984	59161300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_59160051_59160098
Isoform_97234_297	chr1	+	177	1	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6235	False	NA	NA	False	NA	NA	NA	9456826	9457003	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_9456800_9457000
Isoform_97235_49	chr1	-	179	1	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAATATGAACC	NA	False	NA	NA	False	NA	NA	NA	59271488	59271309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59271300_59271500
Isoform_97236_65	chr1	-	177	1	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAGGTAAATA	NA	False	NA	NA	False	NA	NA	NA	59286335	59286158	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59286200_59286300
Isoform_97237_5	chr1	-	221	1	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGACAAACATATAA	NA	False	NA	NA	False	AATAAA	-41	NA	59298510	59298289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59298300_59298500
Isoform_97239_3	chr1	-	2992	1	Antisense	novelGene_ENSMUSG00000041075.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATACAGTCTTCAAG	NA	False	NA	NA	False	AATAAA	-28	NA	59522545	59519553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_59519600_59522500
Isoform_9724_22	chr10	-	178	1	Intergenic	novelGene_995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATGTGCTGTTGTA	2895	False	NA	NA	False	NA	NA	NA	75770497	75770319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75770300_75770500
Isoform_97240_112	chr1	+	4852	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	-327	7	-327	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACAAAGTGAATGTT	5027	False	NA	NA	False	AATAAA	-8	NA	59521255	59526107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_59521300_59526100
Isoform_97242_41	chr1	-	176	1	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	59626352	59626176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59626200_59626400
Isoform_97243_9	chr1	-	176	1	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATGTTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	59626650	59626474	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59626500_59626600
Isoform_97244_31	chr1	+	167	1	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	59640221	59640388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_59640200_59640400
Isoform_97246_4	chr1	+	163	1	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	59663591	59663754	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_59663600_59663800
Isoform_97253_146	chr3	-	177	1	Intergenic	novelGene_7064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	84496770	84496593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr3_-_84496600_84496800
Isoform_97259_8	chr1	-	172	1	Antisense	novelGene_ENSMUSG00000026020.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAAGAAAT	8755	False	NA	NA	False	NA	NA	NA	59754591	59754419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_59754400_59754600
Isoform_97260_1186	chr1	+	2040	1	FSM	ENSMUSG00000061024.9	ENSMUST00000072079.9	2048	1	7	1	7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTGCATTATTTTTGT	NA	False	NA	18	True	AATAAA	-18	NA	9615639	9617679	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_9615600_9617700
Isoform_97277_71	chr1	+	194	1	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59795000	59795194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_59795000_59795200
Isoform_97279_4	chr1	-	1137	1	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTTTCTGTTATCATA	NA	False	NA	NA	False	AATAAA	-13	NA	59802509	59801372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59801400_59802500
Isoform_97280_5	chr1	-	177	1	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATATATGAAATC	NA	False	NA	NA	False	NA	NA	NA	59807911	59807734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59807700_59807900
Isoform_97281_3	chr1	-	152	1	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	59812826	59812674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59812700_59812800
Isoform_97282_4	chr1	+	185	1	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGAAGTACAATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	59845417	59845602	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_59845400_59845600
Isoform_97284_11	chr1	-	165	1	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGCTCCAGACTA	NA	False	NA	NA	False	NA	NA	NA	59927755	59927590	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59927600_59927800
Isoform_97285_5	chr1	+	266	1	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGAAAAGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	59942583	59942849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_59942600_59942800
Isoform_97286_10	chr1	-	159	1	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	59955936	59955777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_59955800_59955900
Isoform_97290_9	chr1	+	176	1	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTACAAAAAGAAAACCTAA	4640	False	NA	NA	False	NA	NA	NA	60052459	60052635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_60052500_60052600
Isoform_97291_161	chr1	-	181	1	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAAAAGACTA	NA	False	NA	NA	False	NA	NA	NA	60059713	60059532	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_60059500_60059700
Isoform_97294_21	chr1	+	178	1	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60200123	60200301	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_60200100_60200300
Isoform_97296_8	chr1	-	156	1	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60231154	60230998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_60231000_60231200
Isoform_97298_31	chr1	-	177	1	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGTATGAG	NA	False	NA	NA	False	NA	NA	NA	9763270	9763093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_9763100_9763300
Isoform_9730_4	chr10	+	2698	1	Antisense	novelGene_ENSMUSG00000019790.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTTTACCCAAGAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	9655891	9658589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_9655900_9658600
Isoform_97302_31	chr1	-	184	1	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGGATGAAAGCGGCC	NA	False	NA	NA	False	AATAAA	-6	NA	60399625	60399441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_60399400_60399600
Isoform_97305_53	chr1	-	188	1	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGCCTCCACAGACGC	NA	False	NA	NA	False	NA	NA	NA	60471155	60470967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_60471000_60471200
Isoform_97306_25	chr1	-	173	1	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	4	True	NA	NA	False	NA	NA	NA	60498514	60498341	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_60498300_60498500
Isoform_97312_5016	chr1	+	1777	1	FSM	ENSMUSG00000101188.2	ENSMUST00000122226.2	1218	1	-12	-547	-12	547	mono-exon	FALSE	NA	NA	NA	NA	NA	5016	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	98	True	AATAAA	-19	NA	60743078	60744855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_60743100_60744900
Isoform_9733_83	chr10	-	209	1	Intergenic	novelGene_997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTACAAAAATAAATAAATA	5821	False	NA	NA	False	NA	NA	NA	75792760	75792551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75792600_75792800
Isoform_97346_6	chr1	+	158	1	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	60875947	60876105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_60875900_60876100
Isoform_97347_5	chr1	-	160	1	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	8497	False	NA	NA	False	NA	NA	NA	60894039	60893879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_60893900_60894000
Isoform_97348_28	chr1	+	173	1	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTTTTTTAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	9777920	9778093	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_9777900_9778100
Isoform_9735_21	chr10	+	168	1	Intergenic	novelGene_998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAAAGACACTGTAGC	NA	False	NA	NA	False	NA	NA	NA	75800530	75800698	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_75800500_75800700
Isoform_97350_3	chr1	-	228	1	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAATCCCAGCACTTGGG	1050	False	NA	NA	False	NA	NA	NA	9781287	9781059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_9781100_9781300
Isoform_97351_10	chr11	+	184	1	Intergenic	novelGene_1876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGTGAAGAGAGAA	5305	False	NA	NA	False	NA	NA	NA	80189217	80189401	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_+_80189200_80189400
Isoform_97352_10	chr1	-	3089	1	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCCT	3652	False	NA	NA	False	NA	NA	NA	62794962	62791873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_62791900_62795000
Isoform_97355_6	chr1	+	377	1	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATAAAGCCACTCTTTG	NA	False	NA	NA	False	NA	NA	NA	63085202	63085579	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_63085200_63085600
Isoform_97356_3	chr1	-	4960	1	ISM	ENSMUSG00000040865.16	ENSMUST00000165066.8	13529	12	61507	0	10801	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCTTTTATTAATTATT	4079	False	NA	0	True	AATAAA	-17	NA	63091919	63086959	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_63087000_63091900
Isoform_97358_7	chr1	-	257	1	ISM	ENSMUSG00000040865.16	ENSMUST00000097718.9	13675	11	7	66603	7	-52240	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63153819	63153562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_63153600_63153800
Isoform_97359_3	chr1	-	368	1	Genic_Genomic	ENSMUSG00000040865.16	novel	NA	NA	NA	NA	-103	-52239	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63153929	63153561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_63153600_63153900
Isoform_9736_9	chr10	+	176	1	Intergenic	novelGene_999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75802820	75802996	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_75802800_75803000
Isoform_97360_9	chr1	+	3233	1	FSM	ENSMUSG00000084799.8	ENSMUST00000186786.2	1236	1	355	-2352	-20	2352	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63153609	63156842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63153600_63156800
Isoform_97361_14	chr1	+	2963	1	FSM	ENSMUSG00000084799.8	ENSMUST00000186786.2	1236	1	625	-2352	-19	2352	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63153879	63156842	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_63153900_63156800
Isoform_97364_26	chr1	+	201	1	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAGCCTCCATTATATC	3988	False	NA	NA	False	NA	NA	NA	9810998	9811199	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_9811000_9811200
Isoform_97365_4	chr1	+	176	1	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAAAGAATAACTA	NA	False	NA	NA	False	NA	NA	NA	63197541	63197717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_63197500_63197700
Isoform_97368_9	chr1	-	191	1	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAAAACCTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	63221455	63221264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_63221300_63221500
Isoform_97369_4	chr1	-	169	1	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAAAGTGAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	63233683	63233514	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_63233500_63233700
Isoform_97376_4	chr1	+	2019	1	NIC	ENSMUSG00000086730.3	novel	462	2	NA	NA	-108	-4996	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63239758	63241777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_63239800_63241800
Isoform_97378_38	chr1	+	178	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGCCGGGCGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	9833780	9833958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_9833800_9834000
Isoform_9738_4	chr10	+	1103	1	Genic_Genomic	ENSMUSG00000049764.9	novel	NA	NA	NA	NA	-24	-4660	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	75868459	75869562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_75868500_75869600
Isoform_97381_10	chr1	-	3789	2	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63305134	63301325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_63304257_63304276
Isoform_97382_4	chr1	+	160	1	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTCAGTTTTCCCAA	7035	False	NA	NA	False	NA	NA	NA	63330988	63331148	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_63331000_63331100
Isoform_97383_19	chr1	+	202	1	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTTTAAAAAACAACAATAA	8123	False	NA	NA	False	NA	NA	NA	9844173	9844375	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_9844200_9844400
Isoform_97385_3	chr1	+	2757	1	ISM	ENSMUSG00000027520.17	ENSMUST00000239483.2	12523	6	38555	0	21082	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTGTTTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	63350978	63353735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_63351000_63353700
Isoform_97386_3	chr1	+	2410	1	Genic_Genomic	ENSMUSG00000027520.17	novel	NA	NA	NA	NA	21431	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTTTGTTTTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	63351327	63353737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_63351300_63353700
Isoform_97388_12	chr1	+	168	1	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	9861016	9861184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_9861000_9861200
Isoform_97389_9	chr1	-	167	1	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAATCTTAGAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63702906	63702739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_63702700_63702900
Isoform_97390_3	chr1	-	1236	1	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACACC	NA	False	NA	NA	False	NA	NA	NA	63780802	63779566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_63779600_63780800
Isoform_97391_17	chr1	-	224	1	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTGAGTAGTATTCCA	NA	False	NA	NA	False	NA	NA	NA	63813464	63813240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_63813200_63813500
Isoform_97394_4	chr1	-	211	1	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGTATGTTTTTTC	NA	False	NA	NA	False	AAAAAG	-10	NA	64597059	64596848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_64596800_64597100
Isoform_97395_6	chr1	-	186	1	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	9877772	9877586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_9877600_9877800
Isoform_97397_4	chr1	+	4910	2	NNC	ENSMUSG00000070871.11	novel	465	5	NA	NA	103	-15599	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATTGACAGCAACTCAT	NA	False	NA	NA	False	NA	NA	NA	64730083	64735013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_64732127_64732146
Isoform_97410_8	chr1	-	204	1	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGAAAAACCACCATCCC	NA	False	NA	NA	False	NA	NA	NA	64789762	64789558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_64789600_64789800
Isoform_97411_6	chr1	+	170	1	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	64799857	64800027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_64799900_64800000
Isoform_97412_5	chr1	+	164	1	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATTAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	64800456	64800620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_64800500_64800600
Isoform_97420_67	chr1	-	482	1	FSM	ENSMUSG00000084416.4	ENSMUST00000120360.2	654	1	204	-32	204	32	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	65033559	65033077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_65033100_65033600
Isoform_97424_10	chr1	-	174	1	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAACAAACACC	NA	False	NA	NA	False	NA	NA	NA	65143325	65143151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_65143200_65143300
Isoform_97425_3	chr1	-	201	1	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	7545	False	NA	NA	False	NA	NA	NA	65153547	65153346	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_65153300_65153500
Isoform_97426_15	chr1	+	159	1	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	65153923	65154082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_65153900_65154100
Isoform_97431_4	chr1	-	1037	1	NIC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	3	-10144	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAAAATCTTTTCTT	NA	False	NA	NA	False	CATAAA	-28	NA	65225635	65224598	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_65224600_65225600
Isoform_97432_5	chr1	-	1331	1	Antisense	novelGene_ENSMUSG00000025949.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAATGAAATTCCGTTC	NA	False	NA	NA	False	NA	NA	NA	65232149	65230818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_65230800_65232100
Isoform_97436_20	chr1	-	155	1	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	9916070	9915915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_9915900_9916100
Isoform_97438_5	chr1	-	1169	1	Genic_Genomic	ENSMUSG00000026000.17	novel	NA	NA	NA	NA	-14	-18109	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	67078045	67076876	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_67076900_67078000
Isoform_97441_12	chr1	+	180	1	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATCCCAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	70500456	70500636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_70500500_70500600
Isoform_97443_4	chr1	-	1972	1	ISM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	73639	38	73639	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTATCTTCTGTAAAAA	305	False	NA	-6	True	ATTAAA	-16	NA	71068666	71066694	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_71066700_71068700
Isoform_97444_7	chr1	-	180	1	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCAAACATGAGGG	NA	False	NA	NA	False	NA	NA	NA	71228134	71227954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_71228000_71228100
Isoform_97455_4	chr1	+	1986	1	NIC	ENSMUSG00000073652.11	novel	826	3	NA	NA	8	-2415	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACACACACAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	71692003	71693989	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_71692000_71694000
Isoform_97456_3	chr1	+	1083	1	NIC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-4	-11520	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATTTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	9978888	9979971	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_9978900_9980000
Isoform_97458_26	chr1	+	208	1	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTATGCTAGTCCCCAAT	NA	False	NA	NA	False	NA	NA	NA	71947921	71948129	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_71947900_71948100
Isoform_97459_8	chr1	-	175	1	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGGCTGAAGAA	7085	False	NA	NA	False	NA	NA	NA	72194235	72194060	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_72194100_72194200
Isoform_97467_26	chr1	+	192	1	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATATTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	72278486	72278678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_72278500_72278700
Isoform_97468_6	chr8	+	176	1	Intergenic	novelGene_10812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACAGTATG	NA	False	NA	NA	False	NA	NA	NA	93516713	93516889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_93516700_93516900
Isoform_97470_3	chr1	-	5257	1	Antisense	novelGene_ENSMUSG00000026187.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAAAAGATTGT	NA	False	NA	NA	False	AATAAA	-28	NA	72388389	72383132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_72383100_72388400
Isoform_97471_4	chr1	+	184	1	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATATAAAAAAGGGGAAA	NA	False	NA	NA	False	NA	NA	NA	10004417	10004601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_10004400_10004600
Isoform_97472_10	chr1	-	655	1	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-5	NA	72417052	72416397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_72416400_72417100
Isoform_97473_15	chr1	+	169	1	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	72676138	72676307	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_72676100_72676300
Isoform_97475_4	chr1	-	175	1	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	72750015	72749840	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_72749800_72750000
Isoform_97477_6	chr1	-	195	1	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCCTTTGTCTCCTCCC	296	False	NA	NA	False	NA	NA	NA	10008867	10008672	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_10008700_10008900
Isoform_97480_26	chr1	-	2093	1	FSM	ENSMUSG00000093178.3	ENSMUST00000175437.3	87	1	-1569	-437	-1569	437	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTGTGGGCAGTAAT	NA	False	NA	-16	True	AATAAA	-11	NA	10014343	10012250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10012200_10014300
Isoform_97481_8	chr1	-	2146	1	FSM	ENSMUSG00000093178.3	ENSMUST00000175437.3	87	1	-1622	-437	-1622	437	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTGTGGGCAGTAAT	NA	False	NA	-16	True	AATAAA	-11	NA	10014396	10012250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_10012200_10014400
Isoform_97482_10	chr1	-	179	1	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAAAGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	72885268	72885089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_72885100_72885300
Isoform_97488_3	chr1	-	2481	1	ISM	ENSMUSG00000055322.17	ENSMUST00000169786.8	9966	35	211732	4	15502	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGTGGCCTGGCTTC	924	False	NA	-6	True	TATAAA	-19	NA	73951874	73949393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_73949400_73951900
Isoform_97490_4	chr1	-	2257	1	ISM	ENSMUSG00000055322.17	ENSMUST00000169786.8	9966	35	211957	3	15727	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGGCCTGGCTTCG	1149	False	NA	-5	True	TATAAA	-20	NA	73951649	73949392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_73949400_73951600
Isoform_97491_3	chr1	-	3381	1	ISM	ENSMUSG00000055322.17	ENSMUST00000169786.8	9966	35	210829	7	14599	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCAGCCTGTGGCCTGGC	21	False	NA	-9	True	TATAAA	-16	NA	73952777	73949396	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_73949400_73952800
Isoform_97492_3	chr1	-	3992	1	ISM	ENSMUSG00000055322.17	ENSMUST00000169786.8	9966	35	210217	8	13987	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCAGCCTGTGGCCTGG	9636	False	NA	-10	True	TATAAA	-15	NA	73953389	73949397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_73949400_73953400
Isoform_97494_64	chr1	-	177	1	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	74213194	74213017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_74213000_74213200
Isoform_97495_39	chr9	+	176	1	Intergenic	novelGene_11138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22053192	22053368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_22053200_22053400
Isoform_97497_41	chr8	+	176	1	Intergenic	novelGene_10949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTC	NA	False	NA	NA	False	NA	NA	NA	112257203	112257379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_+_112257200_112257400
Isoform_97503_255	chr1	+	209	1	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGAAGAATTTTTTTC	NA	False	NA	7	True	NA	NA	NA	10055084	10055293	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_10055100_10055300
Isoform_97507_4	chr1	-	902	1	NIC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	38	-9349	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74343336	74342434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_74342400_74343300
Isoform_97508_8	chr1	-	472	1	Antisense	novelGene_ENSMUSG00000103403.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAACAAAAAAGGAAACA	NA	False	NA	NA	False	NA	NA	NA	74347265	74346793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_74346800_74347300
Isoform_97511_11	chr1	+	171	1	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGGAAAAAAAAAAAAAAGC	3273	False	NA	NA	False	NA	NA	NA	74396547	74396718	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_74396500_74396700
Isoform_97513_23	chr1	+	188	1	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATGAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	74447259	74447447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_74447300_74447400
Isoform_97530_5	chr1	-	175	1	ISM	ENSMUSG00000033364.14	ENSMUST00000191058.7	6011	20	56083	26	17872	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAACCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	74488861	74488686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_74488700_74488900
Isoform_97537_56	chr1	-	579	1	Antisense	novelGene_ENSMUSG00000026174.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	74568987	74568408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_74568400_74569000
Isoform_9754_10	chr10	+	173	1	Intergenic	novelGene_1001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACACTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	75885692	75885865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_75885700_75885900
Isoform_97544_38	chr1	+	173	1	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	74571780	74571953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_74571800_74572000
Isoform_97546_4	chr1	+	177	1	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTAGATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	74579549	74579726	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_74579500_74579700
Isoform_97548_17	chr1	-	179	1	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAAAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	74621271	74621092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_74621100_74621300
Isoform_97549_5	chr1	+	382	1	NIC	ENSMUSG00000026172.13	novel	1488	8	NA	NA	18	-2209	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1160	False	NA	NA	False	AAAAAG	-7	NA	74627476	74627858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_74627500_74627900
Isoform_9755_69	chr10	+	178	1	Intergenic	novelGene_1002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAGTCAAC	6680	False	NA	NA	False	NA	NA	NA	75900127	75900305	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_75900100_75900300
Isoform_97550_49	chr1	-	178	1	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAAGAG	NA	False	NA	NA	False	NA	NA	NA	74690586	74690408	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_74690400_74690600
Isoform_97553_11	chr5	-	177	1	Intergenic	novelGene_8429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	32712791	32712614	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_32712600_32712800
Isoform_97554_30	chr1	-	169	1	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	74732258	74732089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_74732100_74732300
Isoform_97558_232	chr1	-	166	1	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTATATGTAAATT	NA	False	NA	NA	False	NA	NA	NA	74756769	74756603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_74756600_74756800
Isoform_9756_4	chr10	+	174	1	ISM	ENSMUSG00000086798.2	ENSMUST00000124320.2	1298	3	1601	111	1601	-111	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGCGAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	75916051	75916225	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_75916100_75916200
Isoform_97560_5	chr1	-	301	1	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGTTATGAGCACTGT	NA	False	NA	NA	False	NA	NA	NA	74858476	74858175	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_74858200_74858500
Isoform_97563_32	chr10	-	177	1	Intergenic	novelGene_925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAGATAGATAGA	2495	False	NA	NA	False	NA	NA	NA	62754063	62753886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_62753900_62754100
Isoform_97565_13	chr1	+	179	1	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTATGGATA	NA	False	NA	NA	False	NA	NA	NA	74958864	74959043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_74958900_74959000
Isoform_97568_5	chr1	+	175	1	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	75064654	75064829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_75064700_75064800
Isoform_9757_20	chr10	-	184	1	Intergenic	novelGene_1003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACATTAAAAC	4738	False	NA	NA	False	NA	NA	NA	75927765	75927581	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_75927600_75927800
Isoform_97570_4	chr1	+	166	1	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	75067431	75067597	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_75067400_75067600
Isoform_97572_3	chr1	-	175	1	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	75108679	75108504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75108500_75108700
Isoform_97573_5	chr1	+	2691	2	NNC	ENSMUSG00000049339.17	novel	2438	10	NA	NA	0	-231	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	75119437	75122174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_75121492_75121537
Isoform_97574_3	chr1	-	186	1	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGCATGGCTTAA	243	False	NA	NA	False	NA	NA	NA	75142436	75142250	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75142200_75142400
Isoform_9758_3	chr10	+	5426	1	Intergenic	novelGene_726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTATGCCAAAGCTATCC	NA	False	NA	NA	False	NA	NA	NA	9768664	9774090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_9768700_9774100
Isoform_97580_30	chr1	-	171	1	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTCTTTATTAAA	12	True	NA	NA	False	NA	NA	NA	75209440	75209269	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75209300_75209400
Isoform_97581_5	chr1	-	205	1	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGATGAGGTAACACAT	6665	False	NA	NA	False	NA	NA	NA	75271783	75271578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75271600_75271800
Isoform_97582_8	chr1	-	182	1	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75349084	75348902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75348900_75349100
Isoform_97583_7	chr1	-	176	1	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAGAA	7701	False	NA	NA	False	NA	NA	NA	75367315	75367139	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75367100_75367300
Isoform_97584_3	chr1	-	176	1	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAAAAATGATGTCA	NA	False	NA	NA	False	NA	NA	NA	75388804	75388628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75388600_75388800
Isoform_97586_4	chr1	-	169	1	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	75405601	75405432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75405400_75405600
Isoform_97587_5	chr1	+	159	1	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTAAAAAACAAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	75411850	75412009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_75411800_75412000
Isoform_97588_39	chr1	+	168	1	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGCGGGAGGGAGCAG	526	False	NA	NA	False	NA	NA	NA	75436533	75436701	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_75436500_75436700
Isoform_97589_10	chr1	+	174	1	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	9297	False	NA	NA	False	NA	NA	NA	75488858	75489032	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_75488900_75489000
Isoform_9759_5	chr10	-	180	1	Intergenic	novelGene_1004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGACACTTA	NA	False	NA	NA	False	NA	NA	NA	76239236	76239056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_76239100_76239200
Isoform_97590_8	chr1	-	183	1	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	75606787	75606604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75606600_75606800
Isoform_97591_5	chr1	+	172	1	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTTTTTATTCTAGT	NA	False	NA	NA	False	NA	NA	NA	75619443	75619615	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_75619400_75619600
Isoform_97592_10	chr1	-	176	1	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGACAAGGAT	NA	False	NA	NA	False	NA	NA	NA	75793290	75793114	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_75793100_75793300
Isoform_97593_13	chr1	-	224	1	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTATATTTTAAGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	76727015	76726791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_76726800_76727000
Isoform_9760_5	chr10	+	1890	1	Antisense	novelGene_ENSMUSG00000001151.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTATGAGTATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	76278210	76280100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_76278200_76280100
Isoform_97606_12	chrX	+	158	1	Intergenic	novelGene_11873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3076	False	NA	NA	False	NA	NA	NA	13075892	13076050	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_13075900_13076000
Isoform_97608_13	chr1	+	4018	1	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAAAACAGCC	NA	False	NA	NA	False	NA	NA	NA	77414018	77418036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_77414000_77418000
Isoform_97609_6	chr1	+	1850	1	FSM	ENSMUSG00000101849.2	ENSMUST00000189147.2	1849	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGTCTCGATTCTTTC	NA	False	NA	NA	False	ATTAAA	-24	NA	77491916	77493766	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_77491900_77493800
Isoform_97611_3	chr1	+	8450	1	FSM	ENSMUSG00000101798.2	ENSMUST00000186625.2	261	1	-352	-7837	-352	7837	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	78409636	78418086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_78409600_78418100
Isoform_97612_241	chr1	-	168	1	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAGGCTCTTTTCAC	NA	False	NA	-9	True	NA	NA	NA	4835415	4835247	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_4835200_4835400
Isoform_97615_4	chr1	-	3643	1	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAAAGGGATATGATATA	4970	False	NA	NA	False	NA	NA	NA	78653329	78649686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_78649700_78653300
Isoform_97617_7	chr1	-	176	1	Genic_Genomic	ENSMUSG00000067851.12	novel	NA	NA	NA	NA	-57	-431	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	1528	False	NA	NA	False	NA	NA	NA	10231588	10231412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_10231400_10231600
Isoform_97627_6	chr1	+	179	1	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80239213	80239392	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_80239200_80239400
Isoform_9763_3	chr10	-	1128	1	FSM	ENSMUSG00000033126.6	ENSMUST00000218564.2	1499	1	36	335	36	-335	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAGCAAATAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	76304661	76303533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_76303500_76304700
Isoform_97632_7	chr1	+	1269	1	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10299731	10301000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_10299700_10301000
Isoform_97637_155	chr1	-	175	1	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAGAAAGGACA	9560	False	NA	NA	False	NA	NA	NA	82801048	82800873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_82800900_82801000
Isoform_9764_3	chr10	-	188	1	Intergenic	novelGene_1006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGTGATCTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	76509477	76509289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_76509300_76509500
Isoform_97641_10	chr1	-	179	1	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	82927458	82927279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_82927300_82927500
Isoform_97643_9	chr1	-	201	1	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCTGGAAAAGGGAGAAG	NA	False	NA	NA	False	AAAACA	-8	NA	83158904	83158703	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_83158700_83158900
Isoform_97644_15	chr1	-	158	1	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAACC	NA	False	NA	NA	False	NA	NA	NA	83500865	83500707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_83500700_83500900
Isoform_97645_8	chr1	+	178	1	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGGTAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	83602429	83602607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_83602400_83602600
Isoform_97647_17	chr1	-	8060	1	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGGTGTTGTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	83966973	83958913	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_83958900_83967000
Isoform_97649_3	chr1	-	1483	1	FSM	ENSMUSG00000045658.17	ENSMUST00000187992.2	1431	1	-21	-31	1	31	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCCCAGTGGTCTCCA	441	False	NA	NA	False	NA	NA	NA	84262365	84260882	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_84260900_84262400
Isoform_97659_17	chr1	+	3855	1	Antisense	novelGene_ENSMUSG00000026219.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	5514	False	NA	NA	False	NA	NA	NA	84715882	84719737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_84715900_84719700
Isoform_9766_74	chr15	-	176	1	Intergenic	novelGene_3997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAACA	8573	False	77755273	NA	False	NA	NA	NA	77755264	77755088	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_77755100_77755300
Isoform_97663_61	chr1	+	176	1	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	84796192	84796368	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_84796200_84796400
Isoform_97664_8	chr1	-	5206	1	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	10892415	10887209	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_10887200_10892400
Isoform_97665_5	chr1	-	249	1	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTTTTACAACAA	4772	False	NA	NA	False	NA	NA	NA	84820147	84819898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_84819900_84820100
Isoform_97666_30	chr1	+	180	1	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3874	False	NA	NA	False	NA	NA	NA	84843786	84843966	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_84843800_84844000
Isoform_97667_4	chr1	+	2560	1	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACCAAACAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	10947552	10950112	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_10947600_10950100
Isoform_97668_4	chr1	+	173	1	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAAAAATCGC	NA	False	NA	NA	False	NA	NA	NA	84857737	84857910	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_84857700_84857900
Isoform_9767_15	chr10	+	174	1	Intergenic	novelGene_1007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGAAAATGAGTGTA	NA	False	NA	NA	False	NA	NA	NA	76877206	76877380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_76877200_76877400
Isoform_97670_5	chr1	-	2785	1	Genic_Genomic	ENSMUSG00000026220.7	novel	NA	NA	NA	NA	-72	-3088	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84912927	84910142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_84910100_84912900
Isoform_97671_22	chr1	-	283	1	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	84939271	84938988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_84939000_84939300
Isoform_97680_5	chr1	+	306	1	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAGAAGAACTG	6860	False	NA	NA	False	NA	NA	NA	85283783	85284089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_85283800_85284100
Isoform_97681_13	chr1	+	177	1	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	2591	False	NA	NA	False	NA	NA	NA	85603669	85603846	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_85603700_85603800
Isoform_97682_3	chr1	+	180	1	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAGAAGAAGA	935	False	NA	NA	False	NA	NA	NA	85682025	85682205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_85682000_85682200
Isoform_97683_14	chr1	-	176	1	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATAATGATTTAA	569	False	NA	NA	False	NA	NA	NA	85736005	85735829	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_85735800_85736000
Isoform_97689_7	chr12	+	180	1	Intergenic	novelGene_2852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	861	False	NA	NA	False	NA	NA	NA	111161128	111161308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_111161100_111161300
Isoform_97690_6	chr1	-	170	1	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTTTCCT	63	False	NA	NA	False	NA	NA	NA	86021780	86021610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86021600_86021800
Isoform_97692_29	chr1	-	174	1	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	86098597	86098423	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86098400_86098600
Isoform_97694_12	chr2	+	159	1	Intergenic	novelGene_6393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	90653014	90653173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_90653000_90653200
Isoform_97695_3	chr1	+	293	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	4842471	4842764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_4842500_4842800
Isoform_97697_4	chr1	+	177	1	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAACCTCTCACATTT	NA	False	NA	NA	False	NA	NA	NA	86256955	86257132	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_86257000_86257100
Isoform_97698_3	chr1	-	171	1	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGGAAAAAAAAAACAACCAA	NA	False	NA	NA	False	NA	NA	NA	86259163	86258992	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86259000_86259200
Isoform_97699_5	chr1	+	4057	1	Antisense	novelGene_ENSMUSG00000026234.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86271682	86275739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_86271700_86275700
Isoform_9770_17	chr10	+	197	1	Intergenic	novelGene_1008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTGAAAAACAAACTACCAA	NA	False	NA	NA	False	NA	NA	NA	76997109	76997306	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_76997100_76997300
Isoform_97700_3	chr1	-	3131	1	ISM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	11363	188	3174	-188	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACAGCCTGTGTTTG	NA	False	NA	-8	True	AGTAAA	-15	NA	86275759	86272628	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_86272600_86275800
Isoform_97707_7	chr1	-	168	1	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTAGGTGAGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	86308694	86308526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86308500_86308700
Isoform_97708_31	chr1	-	177	1	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCCACAGAAATATAA	7792	False	NA	NA	False	NA	NA	NA	86340224	86340047	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86340000_86340200
Isoform_97709_29	chr1	+	199	1	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGACTTTCCT	NA	False	NA	NA	False	NA	NA	NA	86383518	86383717	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_86383500_86383700
Isoform_97713_15	chr1	+	177	1	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86401939	86402116	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_86401900_86402100
Isoform_97714_3	chr1	-	362	1	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86412916	86412554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86412600_86412900
Isoform_97715_4	chr1	+	2748	1	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCCCAAA	1537	False	NA	NA	False	NA	NA	NA	86415485	86418233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_86415500_86418200
Isoform_97716_3	chr1	-	178	1	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAACTGGACATG	5005	False	NA	NA	False	NA	NA	NA	86421218	86421040	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86421000_86421200
Isoform_9772_5	chr1	+	171	1	Intergenic	novelGene_458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CATTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143711888	143712059	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_143711900_143712100
Isoform_97733_49	chr1	-	173	1	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATAATTACAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	86513473	86513300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86513300_86513500
Isoform_97735_34	chr1	-	177	1	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTCTAC	NA	False	NA	NA	False	NA	NA	NA	86641954	86641777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86641800_86642000
Isoform_97736_5	chr1	-	5736	1	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCTGCTAATCCCAATG	NA	False	NA	NA	False	NA	NA	NA	86800825	86795089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86795100_86800800
Isoform_97738_11	chr1	-	433	1	FSM	ENSMUSG00000084106.5	ENSMUST00000120149.2	891	1	489	-31	489	31	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAACAACAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	86836916	86836483	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_86836500_86836900
Isoform_97742_3	chr1	-	370	1	FSM	ENSMUSG00000084106.5	ENSMUST00000120149.2	891	1	-18	539	-18	-539	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCCTAGGTATTAT	NA	False	NA	NA	False	AAAACA	-44	NA	86837423	86837053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_86837100_86837400
Isoform_97744_7	chr1	-	188	1	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGGCTGGCTTATAGGT	NA	False	NA	NA	False	NA	NA	NA	86999199	86999011	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_86999000_86999200
Isoform_97745_3	chr1	+	178	1	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAGATGTCAT	1600	False	NA	NA	False	NA	NA	NA	87022106	87022284	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_87022100_87022300
Isoform_97755_6	chr1	-	173	1	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	87169602	87169429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_87169400_87169600
Isoform_97757_4	chr1	-	176	1	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAAGAAGTA	NA	False	NA	NA	False	NA	NA	NA	87186853	87186677	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_87186700_87186900
Isoform_97759_3	chr1	+	150	1	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	87240081	87240231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_87240100_87240200
Isoform_9776_3	chr10	-	183	1	Intergenic	novelGene_1010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATCTAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	77312115	77311932	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_77311900_77312100
Isoform_97762_5	chr1	-	3244	1	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	11692932	11689688	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_11689700_11692900
Isoform_97765_99	chr1	-	175	1	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATTTTGCC	NA	False	NA	-17	True	NA	NA	NA	87365922	87365747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_87365700_87365900
Isoform_97766_4	chr1	-	597	1	Antisense	novelGene_ENSMUSG00000048000.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87371332	87370735	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_87370700_87371300
Isoform_9777_13	chr10	+	182	1	Intergenic	novelGene_1011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTTTAAACTGGAG	NA	False	NA	NA	False	NA	NA	NA	77313727	77313909	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_77313700_77313900
Isoform_97771_4	chr1	+	175	1	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	87566929	87567104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_87566900_87567100
Isoform_97773_47	chr1	+	178	1	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTAAAGAAGT	6682	False	NA	NA	False	NA	NA	NA	87601272	87601450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_87601300_87601400
Isoform_97776_4	chr1	-	176	1	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAGAAGGAGCT	NA	False	NA	NA	False	NA	NA	NA	87610506	87610330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_87610300_87610500
Isoform_97778_22	chr1	+	4633	1	NIC	ENSMUSG00000026289.16	novel	749	6	NA	NA	1	-7294	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAGAAAAAAA	7289	False	NA	NA	False	NA	NA	NA	87683778	87688411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_87683800_87688400
Isoform_97780_4	chr1	+	179	1	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAAGTTTATGGTT	NA	False	NA	NA	False	NA	NA	NA	87737050	87737229	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_87737000_87737200
Isoform_97781_4	chr1	+	148	2	NNC	ENSMUSG00000056055.14	novel	857	3	NA	NA	-170	2862	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAGCAGGCTG	NA	False	NA	NA	False	NA	NA	NA	87748258	87748447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_87748354_87748394
Isoform_97782_44	chr1	+	181	1	ISM	ENSMUSG00000056055.14	ENSMUST00000130886.8	1886	9	21169	271	-1639	-271	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	87752570	87752751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_87752600_87752800
Isoform_97784_210	chr1	-	177	1	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87770353	87770176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_87770200_87770400
Isoform_97785_19	chr1	+	3509	1	Genic_Genomic	ENSMUSG00000070738.11	novel	NA	NA	NA	NA	-6	-58955	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGTAAAAGAAAAAATAA	4064	False	NA	NA	False	NA	NA	NA	87781002	87784511	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_87781000_87784500
Isoform_97794_3	chr1	-	2633	1	FSM	ENSMUSG00000005501.15	ENSMUST00000187871.2	2335	1	-318	20	3	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGGCAACTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	87936269	87933636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_87933600_87936300
Isoform_9780_112	chr10	+	213	1	Intergenic	novelGene_1012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAATAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77362117	77362330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_77362100_77362300
Isoform_97816_3	chr1	+	1419	1	Antisense	novelGene_ENSMUSG00000044783.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGCCAGTTCCAGGTT	NA	False	NA	NA	False	NA	NA	NA	88200436	88201855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_88200400_88201900
Isoform_97818_6	chr1	+	173	1	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	12604802	12604975	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_12604800_12605000
Isoform_97819_3	chr1	+	176	1	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88495213	88495389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_88495200_88495400
Isoform_97822_24	chr1	-	171	1	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	88603326	88603155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_88603200_88603300
Isoform_97823_21	chr1	-	3944	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	51	2	51	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTGGAGGCGTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	88629892	88625948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_88625900_88629900
Isoform_97824_24	chr1	-	1969	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	50	1978	50	-1978	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATTGGAGGTGGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	88629893	88627924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_88627900_88629900
Isoform_97825_5	chr1	+	820	1	NIC	ENSMUSG00000097398.3	novel	479	3	NA	NA	26	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGTCTTGGCTCCT	NA	False	NA	16	True	NA	NA	NA	88682637	88683457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_88682600_88683500
Isoform_97826_98	chr11	-	177	1	Intergenic	novelGene_2258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGATGACAAG	NA	False	NA	NA	False	NA	NA	NA	109677798	109677621	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_109677600_109677800
Isoform_97827_3	chr1	+	178	1	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAAACCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	88925365	88925543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_88925400_88925500
Isoform_97831_4	chr1	-	5224	1	Antisense	novelGene_ENSMUSG00000036206.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAACCAACAGAGA	NA	False	NA	NA	False	NA	NA	NA	89082611	89077387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_89077400_89082600
Isoform_97832_6	chr1	-	1420	1	Antisense	novelGene_ENSMUSG00000055013.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	89384447	89383027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_89383000_89384400
Isoform_97834_3	chr1	+	1454	1	ISM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	439016	2342	104659	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACAGTGCTTCTGTGGA	NA	False	NA	8	True	AATAAA	-14	NA	89821543	89822997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_89821500_89823000
Isoform_97835_29	chr1	+	196	1	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCACTTGTGTGTCTCGTG	NA	False	NA	16	True	NA	NA	NA	89843858	89844054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_89843900_89844100
Isoform_97836_20	chr1	+	3055	1	FSM	ENSMUSG00000092627.3	ENSMUST00000189763.2	3030	1	-23	-2	4	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTATTGT	NA	False	NA	NA	False	NA	NA	NA	89857959	89861014	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_89858000_89861000
Isoform_97839_82	chr1	-	173	1	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89874717	89874544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_89874500_89874700
Isoform_97841_16	chr1	+	392	1	NIC	ENSMUSG00000034432.12	novel	2287	8	NA	NA	-3	-1794	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	90531194	90531586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_90531200_90531600
Isoform_97843_5	chr1	-	1967	1	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAATTTGCCACAGT	NA	False	NA	NA	False	NA	NA	NA	90555271	90553304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_90553300_90555300
Isoform_97844_4	chr1	-	2179	1	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCACAGTGGTAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	90555473	90553294	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_90553300_90555500
Isoform_97845_3	chr1	-	2669	1	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAATTTGCCACAGT	NA	False	NA	NA	False	NA	NA	NA	90555973	90553304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_90553300_90556000
Isoform_97847_37	chr1	-	175	1	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12833329	12833154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_12833200_12833300
Isoform_97848_540	chr1	+	160	1	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	540	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTTAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	91231407	91231567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_91231400_91231600
Isoform_97850_4	chr1	+	216	1	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGCCTAAACACACGCA	1168	False	NA	NA	False	NA	NA	NA	91321393	91321609	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_91321400_91321600
Isoform_97851_6	chr1	-	177	1	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTCTCTTTATAAC	NA	False	NA	NA	False	NA	NA	NA	91415079	91414902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_91414900_91415100
Isoform_97852_3	chr1	+	2204	1	NIC	ENSMUSG00000034292.14	novel	2257	16	NA	NA	15	-31091	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCCCAGCCCAGC	8952	False	NA	NA	False	NA	NA	NA	91422383	91424587	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_91422400_91424600
Isoform_97854_7	chr1	-	1475	1	Antisense	novelGene_ENSMUSG00000034292.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAACAA	2065	False	NA	NA	False	NA	NA	NA	91457230	91455755	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_91455800_91457200
Isoform_97855_46	chr1	-	162	1	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	91475254	91475092	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_91475100_91475300
Isoform_97856_13	chr1	+	176	1	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTCCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	91481492	91481668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_91481500_91481700
Isoform_97857_3	chr1	-	2456	1	ISM	ENSMUSG00000026313.17	ENSMUST00000097644.9	8100	27	249106	1	3629	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	NA	False	NA	-1	True	AATAAA	-22	NA	91858957	91856501	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_91856500_91859000
Isoform_97860_21	chr1	-	179	1	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATTCTTCAGTCTG	NA	False	NA	NA	False	NA	NA	NA	92588500	92588321	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_92588300_92588500
Isoform_97861_8	chr1	+	2586	1	FSM	ENSMUSG00000026269.15	ENSMUST00000180306.2	2556	1	-5	-25	-5	25	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	6722	False	NA	NA	False	NA	NA	NA	92838569	92841155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_92838600_92841200
Isoform_97862_3	chr1	-	1116	1	ISM	ENSMUSG00000100632.2	ENSMUST00000191563.2	1689	2	15931	18	15931	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92862381	92861265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_92861300_92862400
Isoform_97863_8	chr1	-	170	1	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAACATTAAGACA	NA	False	NA	NA	False	NA	NA	NA	93218028	93217858	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_93217900_93218000
Isoform_97865_82	chr1	-	1931	1	Antisense	novelGene_ENSMUSG00000106302.3_AS_novelGene_ENSMUSG00000026275.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93274665	93272734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_93272700_93274700
Isoform_97873_35	chr1	+	177	1	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	93414271	93414448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_93414300_93414400
Isoform_97874_6	chr1	-	170	1	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATGAGAGCTGT	7704	False	NA	NA	False	NA	NA	NA	13088403	13088233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_13088200_13088400
Isoform_97891_4	chr1	+	164	1	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACATTCATACACAT	6092	False	NA	NA	False	NA	NA	NA	93496025	93496189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_93496000_93496200
Isoform_97892_4	chr1	+	178	1	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAATCAACAG	NA	False	NA	NA	False	NA	NA	NA	93567375	93567553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_93567400_93567600
Isoform_97893_13	chr1	-	153	1	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAAATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	93588726	93588573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_93588600_93588700
Isoform_97896_19	chr1	-	158	1	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	13111360	13111202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_13111200_13111400
Isoform_97899_7	chr1	-	159	1	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAATATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	93755362	93755203	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_93755200_93755400
Isoform_97900_4	chr1	-	1895	1	Antisense	novelGene_ENSMUSG00000073609.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93760788	93758893	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_93758900_93760800
Isoform_97902_61	chr1	-	188	1	Intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATAATTTG	NA	False	NA	NA	False	NA	NA	NA	93814018	93813830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_93813800_93814000
Isoform_97904_14	chr1	+	183	1	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13121896	13122079	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_13121900_13122100
Isoform_97905_4	chr1	+	177	1	Intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	94010167	94010344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_94010200_94010300
Isoform_97906_105	chr7	+	176	1	Intergenic	novelGene_9850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18805913	18806089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_18805900_18806100
Isoform_97907_14	chr1	+	176	1	Intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTG	NA	False	NA	NA	False	NA	NA	NA	94105370	94105546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_94105400_94105500
Isoform_97909_143	chr1	+	175	1	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	13122116	13122291	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_13122100_13122300
Isoform_97912_4	chr1	+	593	1	FSM	ENSMUSG00000081051.5	ENSMUST00000117288.2	531	1	-11	-51	-11	51	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAGGATGGAAC	NA	False	NA	NA	False	NA	NA	NA	95426334	95426927	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_95426300_95426900
Isoform_97922_12	chr1	+	169	1	Antisense	novelGene_ENSMUSG00000044768.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGGGAGGGAGGG	6804	False	NA	NA	False	NA	NA	NA	97570527	97570696	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_97570500_97570700
Isoform_97925_17	chr1	+	3801	1	Antisense	novelGene_ENSMUSG00000040648.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	97645211	97649012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_97645200_97649000
Isoform_97931_50	chr1	+	178	1	Intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGCATATCAAAGG	NA	False	NA	NA	False	NA	NA	NA	100311832	100312010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_100311800_100312000
Isoform_97933_53	chr1	+	177	1	Intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATATACATT	NA	False	NA	NA	False	NA	NA	NA	102020974	102021151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_102021000_102021200
Isoform_97934_28	chr1	+	251	1	Intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	103095245	103095496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_103095200_103095500
Isoform_97936_57	chr15	+	175	1	Intergenic	novelGene_4084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATAACTTA	NA	False	NA	NA	False	NA	NA	NA	82719236	82719411	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_+_82719200_82719400
Isoform_97938_707	chr1	+	2865	1	Genic_Genomic	ENSMUSG00000067017.6	novel	NA	NA	NA	NA	-9	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	707	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATCTATCCATGCCACA	NA	False	NA	NA	False	AATAAA	-26	NA	105383686	105386551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_105383700_105386600
Isoform_9794_44	chr10	-	171	1	Intergenic	novelGene_1013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATATTAGAGCC	NA	False	NA	NA	False	NA	NA	NA	77457298	77457127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_77457100_77457300
Isoform_97956_19	chr1	+	196	1	Intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTCATCTTTCT	NA	False	NA	NA	False	NA	NA	NA	105418591	105418787	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_105418600_105418800
Isoform_97958_4	chr11	-	199	1	Intergenic	novelGene_1589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	59792475	59792276	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_59792300_59792500
Isoform_9796_156	chr13	+	195	1	Intergenic	novelGene_2998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAGTCAGGTAAAT	NA	False	NA	NA	False	NA	NA	NA	42137058	42137253	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_+_42137100_42137300
Isoform_97960_3	chr1	+	2861	1	Antisense	novelGene_ENSMUSG00000056536.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCCCAATAG	NA	False	NA	NA	False	NA	NA	NA	105513280	105516141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_105513300_105516100
Isoform_97961_5	chr1	-	176	1	Intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	105548827	105548651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_105548700_105548800
Isoform_97963_3	chr1	-	2885	1	Antisense	novelGene_ENSMUSG00000026319.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGCTAAATTTCTCAAAG	NA	False	NA	NA	False	NA	NA	NA	105631983	105629098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_105629100_105632000
Isoform_97964_16	chr1	+	168	1	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTTTTTTGTTT	NA	False	NA	10	True	NA	NA	NA	13160436	13160604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_13160400_13160600
Isoform_97965_11	chr1	+	2604	1	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	34	-30215	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTACTCACTAAATCTAC	NA	False	NA	NA	False	AATAAA	-18	NA	105918169	105920773	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_105918200_105920800
Isoform_97967_16	chr1	-	2880	1	Antisense	novelGene_ENSMUSG00000038866.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-37	NA	105956990	105954110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_105954100_105957000
Isoform_97968_7	chr1	+	173	1	Intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGAAAGTTGTTCTGG	NA	False	NA	NA	False	NA	NA	NA	106065804	106065977	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_106065800_106066000
Isoform_97969_3	chr1	+	1516	1	Antisense	novelGene_ENSMUSG00000009905.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	106670590	106672106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_106670600_106672100
Isoform_97970_10	chr1	+	178	1	Intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAATATAGAGC	NA	False	NA	NA	False	NA	NA	NA	107488429	107488607	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_107488400_107488600
Isoform_97973_23	chr1	+	178	1	Intergenic	novelGene_543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTGGGGTGAAT	NA	False	NA	NA	False	NA	NA	NA	162607952	162608130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_162608000_162608100
Isoform_97974_34	chr1	+	191	1	Intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTCTAC	NA	False	NA	NA	False	NA	NA	NA	108705929	108706120	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_108705900_108706100
Isoform_97976_5	chr1	+	5079	2	Intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	109543094	109548205	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_109548102_109548133
Isoform_97977_15	chr1	+	160	1	Intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	109935038	109935198	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_109935000_109935200
Isoform_97979_85	chr1	-	177	1	Intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCTTCACA	NA	False	NA	NA	False	NA	NA	NA	111220438	111220261	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_111220300_111220400
Isoform_97981_12	chr1	-	1136	1	NIC	ENSMUSG00000038702.7	novel	5759	2	NA	NA	4	316	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACATTAGAAAAAAGTT	NA	False	NA	NA	False	AATATA	-5	NA	111792644	111791508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_111791500_111792600
Isoform_97982_142	chr8	-	177	1	Intergenic	novelGene_10866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	106637528	106637351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_106637400_106637500
Isoform_97984_136	chr1	+	165	1	Intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAGAAATATTA	NA	False	NA	NA	False	NA	NA	NA	113451361	113451526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_113451400_113451500
Isoform_97986_4	chr1	+	4241	1	Intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	113886496	113890737	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_113886500_113890700
Isoform_97987_20	chr1	-	176	1	Intergenic	novelGene_683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	190743227	190743051	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_190743100_190743200
Isoform_97988_4	chr1	-	178	1	Intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGGAAATGTAAT	2670	False	NA	NA	False	NA	NA	NA	116760332	116760154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_116760200_116760300
Isoform_97995_5	chr1	+	178	1	Intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAGAAGTCAGT	NA	False	NA	NA	False	NA	NA	NA	118241383	118241561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_118241400_118241600
Isoform_97996_3	chr1	-	4401	1	Antisense	novelGene_ENSMUSG00000026377.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	118258785	118254384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_118254400_118258800
Isoform_97998_5	chr1	-	173	1	Intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTAAAAAAAGTCCCAC	NA	False	NA	NA	False	NA	NA	NA	118261749	118261576	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_118261600_118261700
Isoform_97999_9	chr1	+	172	1	Intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	118278068	118278240	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_118278100_118278200
Isoform_9800_7	chr1	-	170	1	Intergenic	novelGene_459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATCTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145752100	145751930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_145751900_145752100
Isoform_98004_3	chr1	-	181	1	Intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATAAAGGATGA	8982	False	NA	NA	False	NA	NA	NA	118302210	118302029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_118302000_118302200
Isoform_98005_4	chr1	-	6606	2	Antisense	novelGene_ENSMUSG00000064302.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118355238	118348608	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_118353778_118353801
Isoform_98007_4	chr1	+	177	1	Intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	118505190	118505367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_118505200_118505400
Isoform_9801_4	chr10	-	244	1	Intergenic	novelGene_1015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAACTTGTACTTACA	2621	False	NA	NA	False	NA	NA	NA	77566053	77565809	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_77565800_77566100
Isoform_98011_4	chr1	-	6929	2	Antisense	novelGene_ENSMUSG00000026380.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAACCCACATTTTATT	NA	False	NA	NA	False	NA	NA	NA	118607303	118600354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_118600652_118600671
Isoform_9802_4	chr10	-	190	1	Intergenic	novelGene_1016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTGGGCCGGAACAA	2621	False	NA	NA	False	AATAAA	-2	NA	77566053	77565863	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_77565900_77566100
Isoform_98029_13	chr1	-	193	1	Antisense	novelGene_ENSMUSG00000026380.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTCTTGAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	118606798	118606605	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_118606600_118606800
Isoform_98037_55	chr1	+	5859	1	FSM	ENSMUSG00000088363.3	ENSMUST00000157738.3	130	1	-2511	-3218	-2511	3218	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	9765	False	NA	19	True	AATAAA	-20	NA	118607039	118612898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_118607000_118612900
Isoform_9804_6	chr10	-	153	1	Intergenic	novelGene_1017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77659240	77659087	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_77659100_77659200
Isoform_9805_29	chr10	-	172	1	Intergenic	novelGene_1018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGCTGGGCGTGGTG	5732	False	NA	NA	False	NA	NA	NA	77691556	77691384	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_77691400_77691600
Isoform_9807_8	chr16	-	176	1	Intergenic	novelGene_4300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCTTTTAAAA	5217	False	NA	NA	False	NA	NA	NA	11283088	11282912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_11282900_11283100
Isoform_9808_3	chr10	-	678	1	Intergenic	novelGene_1019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACGAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	77814311	77813633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_77813600_77814300
Isoform_9809_7	chr10	+	173	1	Intergenic	novelGene_1020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTGTTTTT	1441	False	NA	3	True	NA	NA	NA	77839801	77839974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_77839800_77840000
Isoform_9810_60	chr10	-	2138	1	FSM	ENSMUSG00000020277.11	ENSMUST00000220304.2	2141	1	-10	13	-10	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGCAAAAC	NA	False	NA	NA	False	AAAAAG	-14	NA	77845580	77843442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_77843400_77845600
Isoform_9811_3	chr10	+	177	1	Intergenic	novelGene_1021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAAAGGTTA	8805	False	NA	NA	False	NA	NA	NA	77847165	77847342	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_77847200_77847300
Isoform_98110_3	chr1	-	2663	1	Genic_Genomic	ENSMUSG00000048402.15	novel	NA	NA	NA	NA	-777	-183692	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGTAAATAAAC	452	False	NA	NA	False	TTTAAA	-39	NA	118982126	118979463	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_118979500_118982100
Isoform_98111_3	chr1	-	780	1	Intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118983040	118982260	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_118982300_118983000
Isoform_98112_4	chr1	+	1567	1	Antisense	novelGene_ENSMUSG00000099860.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAGAAAAAAGAAAAACTAA	NA	False	NA	NA	False	AATAAA	-15	NA	119233328	119234895	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_119233300_119234900
Isoform_98115_606	chr1	-	187	1	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	606	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGCTGATGGCA	NA	False	NA	NA	False	NA	NA	NA	13261112	13260925	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_13260900_13261100
Isoform_98119_256	chr1	+	2074	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	-9	759	-9	-759	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTGTGAAGATAT	NA	False	NA	33	True	NA	NA	NA	119453880	119455954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_119453900_119456000
Isoform_9812_8	chr10	-	180	1	Intergenic	novelGene_1022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAAAAGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77850285	77850105	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_77850100_77850300
Isoform_98122_41	chr1	+	2148	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	-10	686	-10	-686	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAATCCTGTCCGAGTC	NA	False	NA	106	True	NA	NA	NA	119453879	119456027	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_119453900_119456000
Isoform_98129_7	chr1	+	266	1	Intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAAAGAAACATCTG	NA	False	NA	NA	False	NA	NA	NA	119613593	119613859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_119613600_119613900
Isoform_9813_6	chr10	+	182	1	Intergenic	novelGene_1023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAAAGCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	77851860	77852042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_77851900_77852000
Isoform_98131_3	chr1	+	175	1	Intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATTCAGCAATC	NA	False	NA	NA	False	NA	NA	NA	119643274	119643449	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_119643300_119643400
Isoform_98134_26	chr1	+	176	1	Intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAACTTTAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	119700182	119700358	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_119700200_119700400
Isoform_98135_16	chr1	+	176	1	Intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	119738261	119738437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_119738300_119738400
Isoform_98138_215	chr4	+	176	1	Intergenic	novelGene_7738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108502383	108502559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_108502400_108502600
Isoform_9814_3	chr10	+	206	1	Intergenic	novelGene_1024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACAAACAAAAAAGTT	5076	False	NA	NA	False	NA	NA	NA	77869701	77869907	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_77869700_77869900
Isoform_98142_32	chr1	+	173	1	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAACTGAGTAGT	NA	False	NA	NA	False	NA	NA	NA	13447657	13447830	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_13447700_13447800
Isoform_98143_4	chr1	-	2525	1	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-7	-5468	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCTATGTGTTACCTAA	NA	False	NA	NA	False	NA	NA	NA	121255482	121252957	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_121253000_121255500
Isoform_98144_3	chr1	-	4344	1	Antisense	novelGene_ENSMUSG00000026339.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCCTGGGACCTAAAAG	NA	False	NA	NA	False	NA	NA	NA	121370990	121366646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_121366600_121371000
Isoform_98145_3	chr1	+	176	1	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	13515538	13515714	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_13515500_13515700
Isoform_98148_10	chr7	+	211	1	Antisense	novelGene_ENSMUSG00000052997.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATTCATAGCAAACA	NA	False	NA	NA	False	NA	NA	NA	33863552	33863763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr7_+_33863600_33863800
Isoform_9815_3	chr10	+	173	1	Intergenic	novelGene_1025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATGTCATACTAG	1732	False	NA	NA	False	NA	NA	NA	77876307	77876480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_77876300_77876500
Isoform_98150_71	chr1	+	173	1	Intergenic	novelGene_351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	123477085	123477258	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_123477100_123477300
Isoform_98156_9	chr1	-	177	1	Intergenic	novelGene_352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	126225593	126225416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_126225400_126225600
Isoform_98161_4	chr1	-	3031	1	Intergenic	novelGene_353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTAAAAGACTCAG	NA	False	NA	NA	False	NA	NA	NA	127701616	127698585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_127698600_127701600
Isoform_98162_4	chr1	-	1965	1	Antisense	novelGene_ENSMUSG00000026349.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAACCAAACCAAAAC	1843	False	NA	NA	False	NA	NA	NA	127731111	127729146	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_127729100_127731100
Isoform_98169_181	chr10	+	178	1	Intergenic	novelGene_786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33254321	33254499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_33254300_33254500
Isoform_9817_3	chr10	-	172	1	Intergenic	novelGene_727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAATAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	11135768	11135596	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_11135600_11135800
Isoform_98171_3	chr1	-	163	1	Intergenic	novelGene_355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAATTAAGTAG	NA	False	NA	NA	False	NA	NA	NA	127841692	127841529	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_127841500_127841700
Isoform_98172_47	chr1	+	176	1	Intergenic	novelGene_356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTATCCTTTTGCTAAT	NA	False	NA	NA	False	NA	NA	NA	127842050	127842226	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_127842000_127842200
Isoform_98173_6	chr1	+	178	1	Intergenic	novelGene_357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGCTGGGCATTACA	NA	False	NA	NA	False	NA	NA	NA	127848906	127849084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_127848900_127849100
Isoform_98178_6	chr1	+	243	1	FSM	ENSMUSG00000058603.11	ENSMUST00000121497.2	414	1	212	-41	212	41	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	127966517	127966760	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_127966500_127966800
Isoform_98180_10	chr1	+	3583	1	FSM	ENSMUSG00000056211.14	ENSMUST00000185389.2	8458	1	-14	4889	-4	-4889	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGATTA	NA	False	NA	NA	False	ACTAAA	-4	NA	128031053	128034636	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_128031100_128034600
Isoform_98181_57	chr1	+	177	1	Intergenic	novelGene_358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	5263	False	NA	NA	False	NA	NA	NA	128049746	128049923	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_128049700_128049900
Isoform_98182_6	chr1	-	178	1	Intergenic	novelGene_359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCTTTATTAGGCT	NA	False	NA	NA	False	NA	NA	NA	128063493	128063315	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_128063300_128063500
Isoform_98183_66	chr1	-	177	1	Antisense	novelGene_ENSMUSG00000056211.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128136800	128136623	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_128136600_128136800
Isoform_98184_18	chr1	+	165	1	Intergenic	novelGene_360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAATAAAAAATAAAA	1344	False	NA	NA	False	NA	NA	NA	128153164	128153329	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_128153200_128153300
Isoform_98188_22	chr1	-	215	1	Intergenic	novelGene_361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGAAACAACTATCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	128176705	128176490	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_128176500_128176700
Isoform_98189_89	chr1	-	173	1	Intergenic	novelGene_362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128190379	128190206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_128190200_128190400
Isoform_9820_5	chr10	+	2652	1	Antisense	novelGene_ENSMUSG00000001211.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACAACCGAGCCCTCG	NA	False	NA	NA	False	AAGAAA	-10	NA	78184961	78187613	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_78185000_78187600
Isoform_98209_4	chr1	-	153	1	Intergenic	novelGene_363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTACAGTATTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	128390964	128390811	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_128390800_128391000
Isoform_98210_53	chr1	-	383	1	FSM	ENSMUSG00000094122.2	ENSMUST00000086596.2	378	1	-5	0	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACTCATGTCAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	129729506	129729123	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_129729100_129729500
Isoform_98211_56	chr1	-	165	1	Intergenic	novelGene_364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	130116009	130115844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_130115800_130116000
Isoform_98212_30	chr1	+	177	1	Intergenic	novelGene_365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAATCCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	130377445	130377622	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_130377400_130377600
Isoform_98214_279	chr7	-	176	1	Intergenic	novelGene_9883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	26854062	26853886	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_-_26853900_26854100
Isoform_98215_11	chr1	-	176	1	Intergenic	novelGene_366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATTAAAAGGCAC	9141	False	NA	NA	False	NA	NA	NA	131130176	131130000	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131130000_131130200
Isoform_98219_21	chr1	-	182	1	Intergenic	novelGene_367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTTGAAGTTGATAA	NA	False	NA	NA	False	NA	NA	NA	131258997	131258815	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131258800_131259000
Isoform_98222_8	chr1	-	179	1	Intergenic	novelGene_369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	131377673	131377494	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131377500_131377700
Isoform_98223_43	chr1	+	1406	1	Intergenic	novelGene_370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	131447041	131448447	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_131447000_131448400
Isoform_98224_21	chr1	-	175	1	Intergenic	novelGene_371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAT	3075	False	NA	NA	False	NA	NA	NA	131492327	131492152	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131492200_131492300
Isoform_98225_9	chr4	+	170	2	Antisense	novelGene_ENSMUSG00000042446.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTCTAAAAACAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	126793009	126793450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr4_+_126793134_126793404
Isoform_98231_5	chr1	+	2419	1	NIC	ENSMUSG00000026433.14	novel	1202	5	NA	NA	28	-1293	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131795005	131797424	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_131795000_131797400
Isoform_98232_35	chr1	-	173	1	Intergenic	novelGene_372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	131799269	131799096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131799100_131799300
Isoform_98233_6	chr5	-	177	1	Intergenic	novelGene_8620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	92236332	92236155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_92236200_92236300
Isoform_98234_7	chr1	-	176	1	Intergenic	novelGene_374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATGACCATCT	NA	False	NA	NA	False	NA	NA	NA	131830366	131830190	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131830200_131830400
Isoform_98235_6	chr1	-	206	1	Intergenic	novelGene_375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	131840991	131840785	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131840800_131841000
Isoform_98287_3	chr1	-	711	1	Antisense	novelGene_ENSMUSG00000026434.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCCCATCTTCAAGTAA	NA	False	NA	NA	False	NA	NA	NA	131863312	131862601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_131862600_131863300
Isoform_98295_26	chr1	+	162	1	Intergenic	novelGene_376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTTAAAAAACAAACAAG	NA	False	NA	NA	False	NA	NA	NA	131878123	131878285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_131878100_131878300
Isoform_98296_85	chr1	-	199	1	Intergenic	novelGene_377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATATGCCAGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	131913563	131913364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131913400_131913600
Isoform_98298_4	chr1	-	156	1	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	3133751	3133595	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_3133600_3133800
Isoform_98299_9	chr4	+	176	1	Intergenic	novelGene_7569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48697058	48697234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_48697100_48697200
Isoform_98301_6	chr1	-	273	1	Intergenic	novelGene_378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGCTCCAGTGTGTCGGG	NA	False	NA	NA	False	NA	NA	NA	131938234	131937961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_131938000_131938200
Isoform_98302_4	chr1	-	2061	1	Antisense	novelGene_ENSMUSG00000026436.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131946161	131944100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_131944100_131946200
Isoform_98304_6	chr1	-	171	1	Intergenic	novelGene_379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	132020667	132020496	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_132020500_132020700
Isoform_98305_9	chr1	-	173	1	Intergenic	novelGene_380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCACTG	NA	False	NA	NA	False	NA	NA	NA	132022134	132021961	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_132022000_132022100
Isoform_98307_10	chr1	-	178	1	Intergenic	novelGene_381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGAGAGAATTAA	NA	False	NA	NA	False	NA	NA	NA	132170075	132169897	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_132169900_132170100
Isoform_98308_100	chr1	+	163	1	Intergenic	novelGene_382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	132175278	132175441	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_132175300_132175400
Isoform_98309_5	chr1	-	173	1	Intergenic	novelGene_383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	1346	False	NA	NA	False	NA	NA	NA	132198966	132198793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_132198800_132199000
Isoform_98310_68	chr1	-	180	1	Intergenic	novelGene_384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAAAAATGGAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	132335391	132335211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_132335200_132335400
Isoform_98312_18	chr1	+	179	1	Intergenic	novelGene_385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTGGAGTGTTAA	NA	False	NA	NA	False	NA	NA	NA	132359148	132359327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_132359100_132359300
Isoform_98313_22	chr1	+	168	1	Intergenic	novelGene_386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTTAAAAATGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	132397590	132397758	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_132397600_132397800
Isoform_98314_4	chr1	-	4189	1	FSM	ENSMUSG00000097760.3	ENSMUST00000188203.2	1006	1	50	-3233	31	3233	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATCATTGTAAA	NA	False	NA	NA	False	AAAAAG	-33	NA	132404752	132400563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_132400600_132404800
Isoform_98315_6	chr1	-	2644	1	FSM	ENSMUSG00000025930.7	ENSMUST00000190471.2	1226	1	0	-1418	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCATTGTAAAAGTT	NA	False	NA	1	True	AATAAA	-18	NA	14826216	14823572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_14823600_14826200
Isoform_98316_39	chr9	-	177	1	Intergenic	novelGene_11151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATATA	NA	False	NA	NA	False	NA	NA	NA	24733623	24733446	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_24733400_24733600
Isoform_98317_19	chr10	+	177	1	Intergenic	novelGene_916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAGCCATG	NA	False	NA	NA	False	NA	NA	NA	62556627	62556804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_62556600_62556800
Isoform_98322_5	chr11	-	206	1	Intergenic	novelGene_1937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGTAGGGAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	86072942	86072736	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_86072700_86072900
Isoform_98325_88	chr1	-	186	1	Intergenic	novelGene_387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	132752722	132752536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_132752500_132752700
Isoform_98327_77	chr5	-	177	1	Intergenic	novelGene_9060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	139326917	139326740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_139326700_139326900
Isoform_98362_9	chr1	-	177	1	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	15013001	15012824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_15012800_15013000
Isoform_98363_52	chr1	-	166	1	Intergenic	novelGene_389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGGAGAGATTTACTT	NA	False	NA	-6	True	NA	NA	NA	132949476	132949310	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_132949300_132949500
Isoform_98364_3	chr1	-	1489	1	Antisense	novelGene_ENSMUSG00000025925.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	2	True	NA	NA	NA	15876240	15874751	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_15874800_15876200
Isoform_98365_14	chr1	+	1186	1	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-2	-15175	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAGAAATAAATGTT	NA	False	NA	NA	False	NA	NA	NA	15875878	15877064	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_15875900_15877100
Isoform_98367_852	chr1	-	180	1	Intergenic	novelGene_390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	852	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	132964019	132963839	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_132963800_132964000
Isoform_98368_9	chr1	-	3302	1	Antisense	novelGene_ENSMUSG00000026447.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAACAAAAA	5457	False	NA	NA	False	AGTAAA	-23	NA	133025126	133021824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_133021800_133025100
Isoform_98369_32	chr1	+	163	1	Intergenic	novelGene_391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGCAAATATTTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	133037234	133037397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_133037200_133037400
Isoform_98370_8	chr1	-	298	1	Intergenic	novelGene_392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATCATAGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	133049909	133049611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_133049600_133049900
Isoform_9840_7	chr10	+	179	1	Intergenic	novelGene_1027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCAGAGGAATGC	NA	False	NA	NA	False	NA	NA	NA	78335658	78335837	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_78335700_78335800
Isoform_98401_3	chr1	-	176	1	Intergenic	novelGene_393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAGAAAGAAAGAAAGAG	1316	False	NA	NA	False	NA	NA	NA	133070447	133070271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_133070300_133070400
Isoform_98402_3	chr1	-	161	1	Intergenic	novelGene_394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	133072762	133072601	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_133072600_133072800
Isoform_98403_18	chr1	-	207	1	Intergenic	novelGene_395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGAGGGGAAACTAGGAAA	NA	False	NA	NA	False	NA	NA	NA	133077662	133077455	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_133077500_133077700
Isoform_98405_3	chr1	+	171	1	Intergenic	novelGene_396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAACTTT	1704	False	NA	NA	False	NA	NA	NA	133257838	133258009	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_133257800_133258000
Isoform_98406_123	chr1	+	175	1	Intergenic	novelGene_397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	5328	False	NA	NA	False	NA	NA	NA	133261462	133261637	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_133261500_133261600
Isoform_9841_56	chr10	-	194	1	Intergenic	novelGene_1028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTACT	NA	False	NA	NA	False	NA	NA	NA	78338966	78338772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_78338800_78339000
Isoform_98411_15	chr1	+	178	1	Intergenic	novelGene_398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAACATTTAACAA	NA	False	NA	NA	False	NA	NA	NA	133479591	133479769	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_133479600_133479800
Isoform_98413_10	chr1	-	179	1	Intergenic	novelGene_399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATACTCTA	NA	False	NA	NA	False	NA	NA	NA	133496718	133496539	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_133496500_133496700
Isoform_98425_37	chr1	-	1955	1	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	9	-39546	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAAAGAAGGGT	NA	False	NA	NA	False	AATAAA	-20	NA	133589109	133587154	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_133587200_133589100
Isoform_9843_3	chr10	-	171	1	Intergenic	novelGene_1029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAATAAATCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78543968	78543797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_78543800_78544000
Isoform_98430_3	chr1	-	1226	1	ISM	ENSMUSG00000026463.18	ENSMUST00000143567.8	11725	21	97088	3271	-2072	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAACCAATGCCATGCA	NA	False	NA	-9	True	AATAAA	-16	NA	133631691	133630465	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_133630500_133631700
Isoform_98431_3	chr1	-	888	1	ISM	ENSMUSG00000026463.18	ENSMUST00000143567.8	11725	21	97452	3245	-1708	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAACCCATGCCCACTT	NA	False	NA	17	True	AATAAA	-42	NA	133631327	133630439	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_133630400_133631300
Isoform_98435_3	chr1	-	713	1	Intergenic	novelGene_400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133789364	133788651	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_133788700_133789400
Isoform_98436_3	chr1	-	621	1	Intergenic	novelGene_401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGCAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	133813951	133813330	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_133813300_133814000
Isoform_9844_4	chr10	+	1842	1	Antisense	novelGene_ENSMUSG00000097007.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4783	False	NA	NA	False	NA	NA	NA	11154264	11156106	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_11154300_11156100
Isoform_98443_2494	chr1	+	169	1	Intergenic	novelGene_402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2494	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATTTAAAAAAAAAAAAA	8104	False	NA	NA	False	NA	NA	NA	134284709	134284878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_134284700_134284900
Isoform_98445_42	chr1	-	177	1	Intergenic	novelGene_403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTGGTGTT	9779	False	NA	NA	False	NA	NA	NA	134295056	134294879	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_134294900_134295100
Isoform_98446_16	chr1	+	173	1	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACCAAAGATTG	3075	False	NA	NA	False	NA	NA	NA	16056374	16056547	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_16056400_16056500
Isoform_98447_15	chr1	-	175	1	Intergenic	novelGene_404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGAGATCAC	6772	False	NA	NA	False	NA	NA	NA	134326086	134325911	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_134325900_134326100
Isoform_98449_5	chr1	+	3388	1	Intergenic	novelGene_405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	4277	False	NA	NA	False	NA	NA	NA	134329824	134333212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_134329800_134333200
Isoform_9845_6	chr10	-	1247	1	FSM	ENSMUSG00000060301.7	ENSMUST00000219729.2	1510	1	11	252	11	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	78933402	78932155	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_78932200_78933400
Isoform_98455_28	chr1	-	168	1	Intergenic	novelGene_406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTATTGT	4837	False	NA	NA	False	NA	NA	NA	134357128	134356960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_134357000_134357100
Isoform_98457_87	chr1	-	181	1	Intergenic	novelGene_407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGGGATGGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	134369561	134369380	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_134369400_134369600
Isoform_98458_64	chr10	+	178	1	Intergenic	novelGene_728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCCTCAAAGAA	2579	False	NA	NA	False	NA	NA	NA	11152060	11152238	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_11152100_11152200
Isoform_98461_11	chr1	-	193	1	Intergenic	novelGene_408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTAATGTTATATA	1527	False	NA	NA	False	NA	NA	NA	134404105	134403912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_134403900_134404100
Isoform_98466_134	chr1	-	1550	2	Antisense	novelGene_ENSMUSG00000042229.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134429160	134427572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_134428607_134428644
Isoform_9847_49	chr10	+	167	1	Intergenic	novelGene_1030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79402449	79402616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_79402400_79402600
Isoform_98473_6	chr1	-	199	1	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAAGTTTTCACATAG	NA	False	NA	NA	False	NA	NA	NA	16133236	16133037	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_16133000_16133200
Isoform_98474_10	chr1	-	173	1	Intergenic	novelGene_409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGTATGAACCA	NA	False	NA	NA	False	NA	NA	NA	134495145	134494972	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_134495000_134495100
Isoform_98475_15	chr1	-	5137	1	Antisense	novelGene_ENSMUSG00000042207.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGAAAAAAAAAAAAAGGCA	8590	False	NA	NA	False	AATAAA	-30	NA	134541085	134535948	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_134535900_134541100
Isoform_98476_44	chr1	-	182	1	Intergenic	novelGene_410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAAAAG	4786	False	NA	NA	False	NA	NA	NA	134544889	134544707	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_134544700_134544900
Isoform_98479_20	chr1	-	182	1	Intergenic	novelGene_411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGC	NA	False	NA	NA	False	NA	NA	NA	134601199	134601017	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_134601000_134601200
Isoform_9848_5	chr10	+	2241	1	FSM	ENSMUSG00000111977.2	ENSMUST00000219233.2	1665	1	-579	3	-579	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCGCTGTTGACGGAGGA	NA	False	NA	NA	False	AATAAA	-17	NA	79473110	79475351	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_79473100_79475400
Isoform_98480_3	chr1	-	154	1	Intergenic	novelGene_412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	134603725	134603571	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_134603600_134603700
Isoform_98481_29	chr1	+	180	1	Intergenic	novelGene_413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTTTTTGTCTGTAA	NA	False	NA	NA	False	NA	NA	NA	134885876	134886056	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_134885900_134886100
Isoform_98483_44	chr1	+	156	1	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGAGGAGAAGCTTA	NA	False	NA	NA	False	NA	NA	NA	16373826	16373982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_16373800_16374000
Isoform_98484_22	chr1	+	185	1	Intergenic	novelGene_414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATGAGTTCCA	NA	False	NA	NA	False	NA	NA	NA	135099035	135099220	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_135099000_135099200
Isoform_98485_17	chr1	+	175	1	Intergenic	novelGene_415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGTTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	135103656	135103831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_135103700_135103800
Isoform_98487_283	chr1	-	176	1	Intergenic	novelGene_416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	135139619	135139443	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135139400_135139600
Isoform_98488_9	chr1	+	199	1	Intergenic	novelGene_417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGAATCTTTTTTTTC	1179	False	NA	NA	False	NA	NA	NA	135156750	135156949	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_135156800_135156900
Isoform_98491_27	chr1	+	1360	1	FSM	ENSMUSG00000079139.5	ENSMUST00000110798.5	1231	1	51	-180	51	180	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTTATTCTTAT	4212	False	NA	NA	False	AATAAA	-17	NA	135159783	135161143	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_135159800_135161100
Isoform_98499_64	chr1	+	159	1	Intergenic	novelGene_418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	135202771	135202930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_135202800_135202900
Isoform_9850_21	chr10	-	172	1	Intergenic	novelGene_1032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	79493169	79492997	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_79493000_79493200
Isoform_98500_55	chr1	-	161	1	FSM	ENSMUSG00000041926.16	ENSMUST00000189615.2	2275	1	2114	0	-383	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAGCAAA	NA	False	NA	NA	False	NA	NA	NA	135205539	135205378	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_135205400_135205500
Isoform_98503_82	chr1	-	177	1	Intergenic	novelGene_419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTGGACAGAG	6919	False	NA	NA	False	NA	NA	NA	135271025	135270848	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135270800_135271000
Isoform_98505_8	chr1	-	358	1	Intergenic	novelGene_420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGTTTAAATAAATA	2670	False	NA	NA	False	NA	NA	NA	135281410	135281052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135281100_135281400
Isoform_98510_4	chr16	-	172	1	Intergenic	novelGene_4321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	14172045	14171873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr16_-_14171900_14172000
Isoform_98513_7	chr1	+	179	1	Intergenic	novelGene_422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAAGCGTCG	NA	False	NA	NA	False	NA	NA	NA	135397106	135397285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_135397100_135397300
Isoform_98514_5	chr1	-	173	1	Intergenic	novelGene_423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	135454415	135454242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135454200_135454400
Isoform_98515_3	chr1	-	178	1	Intergenic	novelGene_424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGGAAAAAGAAAAAAAAC	7759	False	NA	NA	False	NA	NA	NA	135472203	135472025	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135472000_135472200
Isoform_98516_5	chr1	-	160	1	Intergenic	novelGene_425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAAACCCTGTAAGGCT	NA	False	NA	NA	False	NA	NA	NA	135566167	135566007	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135566000_135566200
Isoform_98517_14	chr1	-	192	1	Intergenic	novelGene_426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAATCCCACAAATAA	NA	False	NA	NA	False	NA	NA	NA	135611112	135610920	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135610900_135611100
Isoform_98519_6	chr1	+	174	1	Intergenic	novelGene_428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAGCGTATGC	NA	False	NA	NA	False	NA	NA	NA	135631042	135631216	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_135631000_135631200
Isoform_98520_30	chr1	-	181	1	Intergenic	novelGene_429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATTTATATTTTGTA	1687	False	NA	NA	False	NA	NA	NA	135632358	135632177	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135632200_135632400
Isoform_98527_42	chr1	-	173	1	Intergenic	novelGene_430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAATTCCAAAAA	NA	False	NA	-5	True	NA	NA	NA	135733870	135733697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135733700_135733900
Isoform_98530_3	chr1	-	203	1	Intergenic	novelGene_431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATGTGCTTAAGAGCA	922	False	NA	NA	False	NA	NA	NA	135983392	135983189	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_135983200_135983400
Isoform_98533_3	chr1	+	2869	1	Genic_Genomic	ENSMUSG00000041642.19	novel	NA	NA	NA	NA	5843	27	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGGTAGCTCTTTCT	NA	False	NA	30	True	AATAAA	-40	NA	136102894	136105763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_136102900_136105800
Isoform_98534_29	chr1	+	175	1	Intergenic	novelGene_432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAATGCAGTACA	NA	False	NA	NA	False	NA	NA	NA	136130294	136130469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136130300_136130500
Isoform_98536_7	chr1	-	174	1	Intergenic	novelGene_433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAAAAGTATATCTGC	NA	False	NA	NA	False	NA	NA	NA	136369964	136369790	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_136369800_136370000
Isoform_98537_6	chr1	+	243	1	Intergenic	novelGene_434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGATTTTATTAATA	NA	False	NA	NA	False	AATAAA	-18	NA	136376021	136376264	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136376000_136376300
Isoform_98539_5	chr1	-	180	1	Intergenic	novelGene_435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGACATACAATGTTA	NA	False	NA	NA	False	NA	NA	NA	136376447	136376267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_136376300_136376400
Isoform_98540_3	chr1	-	1013	1	Antisense	novelGene_ENSMUSG00000041498.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	5158	False	NA	NA	False	NA	NA	NA	136410361	136409348	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_136409300_136410400
Isoform_98541_5	chr1	-	4477	1	Antisense	novelGene_ENSMUSG00000041498.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	136433481	136429004	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_136429000_136433500
Isoform_98542_9	chr1	+	189	1	Intergenic	novelGene_436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACCACCAACAAGACTAAA	NA	False	NA	NA	False	NA	NA	NA	136484456	136484645	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136484500_136484600
Isoform_98543_12	chr1	+	176	1	Intergenic	novelGene_437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	136486244	136486420	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136486200_136486400
Isoform_98544_4	chr1	-	171	1	Intergenic	novelGene_438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	136488157	136487986	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_136488000_136488200
Isoform_98547_29	chr1	+	168	1	Intergenic	novelGene_439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAGTAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	136512620	136512788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136512600_136512800
Isoform_98548_4	chr1	-	2052	1	Genic_Genomic	ENSMUSG00000104366.2	novel	NA	NA	NA	NA	1361	977	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	136531845	136529793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_136529800_136531800
Isoform_98549_6	chr1	+	253	1	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGGTGTGATGGTTT	NA	False	NA	NA	False	AATAGA	-39	NA	16683728	16683981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_16683700_16684000
Isoform_9855_10	chr10	-	8042	1	Antisense	novelGene_ENSMUSG00000047648.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTCAGGCCGGGCGGT	NA	False	NA	NA	False	AAGAAA	-45	NA	11169994	11161952	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_-_11162000_11170000
Isoform_9856_12	chr4	+	328	2	Intergenic	novelGene_7973	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAATCTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132246099	132255100	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_132246285_132254957
Isoform_98570_14	chr12	+	182	1	FSM	ENSMUSG00000021007.15	ENSMUST00000222378.2	1914	1	1734	-2	1734	2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98601002	98601184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr12_+_98601000_98601200
Isoform_98571_311	chr1	+	177	1	Intergenic	novelGene_440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136617183	136617360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136617200_136617400
Isoform_98572_19	chr1	-	178	1	Intergenic	novelGene_441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGACTTAGGATT	NA	False	NA	NA	False	NA	NA	NA	136622260	136622082	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_136622100_136622300
Isoform_98573_20	chr1	-	177	1	Intergenic	novelGene_442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGACCCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	136655292	136655115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_136655100_136655300
Isoform_98575_227	chr1	-	177	1	Intergenic	novelGene_443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1565	False	NA	NA	False	NA	NA	NA	136683675	136683498	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_136683500_136683700
Isoform_98576_3	chr1	-	315	1	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTACAGACTTTTAAGA	NA	False	NA	NA	False	AATAAA	-14	NA	4927810	4927495	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_4927500_4927800
Isoform_98577_3	chr1	+	177	1	Intergenic	novelGene_444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGAGAGATGC	NA	False	NA	NA	False	NA	NA	NA	136763146	136763323	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136763100_136763300
Isoform_98581_7	chr1	+	6163	1	Intergenic	novelGene_445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136831126	136837289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136831100_136837300
Isoform_98583_14	chr1	-	156	1	Intergenic	novelGene_446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAATCAGACATGTAA	NA	False	NA	NA	False	NA	NA	NA	136918636	136918480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_136918500_136918600
Isoform_98584_17	chr1	+	173	1	Intergenic	novelGene_447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136920433	136920606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136920400_136920600
Isoform_98585_5	chr1	-	186	1	Intergenic	novelGene_448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTTCAGCA	5681	False	NA	NA	False	NA	NA	NA	136923623	136923437	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_136923400_136923600
Isoform_98586_17	chr1	-	182	1	Intergenic	novelGene_449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8666	False	NA	NA	False	NA	NA	NA	136940929	136940747	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_136940700_136940900
Isoform_98587_95	chr1	+	183	1	Intergenic	novelGene_450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAGAAGTAAATA	2146	False	NA	NA	False	NA	NA	NA	136951845	136952028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_136951800_136952000
Isoform_98588_13	chr1	-	170	1	Intergenic	novelGene_451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAACACATCTAA	NA	False	NA	NA	False	NA	NA	NA	137053927	137053757	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_137053800_137053900
Isoform_98589_26	chr1	-	162	1	Intergenic	novelGene_452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATAAATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	137262762	137262600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_137262600_137262800
Isoform_98590_9	chr1	+	2417	1	Intergenic	novelGene_453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	138534626	138537043	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_138534600_138537000
Isoform_98592_126	chr19	-	177	1	Intergenic	novelGene_5577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACTGACA	NA	False	NA	NA	False	NA	NA	NA	3821401	3821224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_3821200_3821400
Isoform_98597_5	chr1	-	234	1	Intergenic	novelGene_454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTACTTAGTCATTTTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	139271796	139271562	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_139271600_139271800
Isoform_98598_5	chr1	+	170	1	Intergenic	novelGene_455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139338843	139339013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_139338800_139339000
Isoform_98599_52	chr1	-	177	1	Intergenic	novelGene_456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGAGAGAGATAGAT	8280	False	NA	0	True	NA	NA	NA	139486410	139486233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_139486200_139486400
Isoform_9861_60	chr10	-	176	1	Intergenic	novelGene_1033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	79562862	79562686	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_79562700_79562900
Isoform_98611_9	chr1	-	2216	1	Intergenic	novelGene_457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACACCAAACTTTTTC	NA	False	NA	NA	False	AATACA	-42	NA	143681581	143679365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_143679400_143681600
Isoform_98614_6	chr1	-	179	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAATTTAATATTGA	NA	False	NA	NA	False	NA	NA	NA	16822109	16821930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_16821900_16822100
Isoform_98616_4	chr1	+	242	1	Intergenic	novelGene_460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTATTCCTACCTGA	NA	False	NA	NA	False	AGTAAA	-13	NA	148344378	148344620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_148344400_148344600
Isoform_98617_4	chr1	+	181	1	Intergenic	novelGene_461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACATATATATGAGTGC	NA	False	NA	NA	False	NA	NA	NA	148821591	148821772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_148821600_148821800
Isoform_98618_21	chr19	-	174	1	Intergenic	novelGene_5700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21859203	21859029	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr19_-_21859000_21859200
Isoform_98619_5	chr1	-	196	1	Intergenic	novelGene_463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAAATCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	149377280	149377084	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_149377100_149377300
Isoform_9862_4	chr10	+	2429	1	NIC	ENSMUSG00000020327.5	novel	1070	3	NA	NA	16	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79590925	79593354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_79590900_79593400
Isoform_98621_8	chr1	+	260	1	Intergenic	novelGene_464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCTTAAGCAACAGAAGC	NA	False	NA	NA	False	GATAAA	-39	NA	150075318	150075578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_150075300_150075600
Isoform_98622_21	chr15	+	6890	3	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	0	4112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33831593	33838611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr15_+_33836952_33837043_33837499_33837534
Isoform_98623_5	chr1	-	3600	2	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	16901976	16898331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_16898436_16898480
Isoform_98625_3	chr1	+	175	1	Intergenic	novelGene_465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGGTCTAGCACC	NA	False	NA	NA	False	NA	NA	NA	150511267	150511442	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_150511300_150511400
Isoform_98626_8	chr1	+	177	1	Intergenic	novelGene_466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAAACAATGTA	NA	False	NA	NA	False	NA	NA	NA	150812170	150812347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_150812200_150812300
Isoform_98627_4	chr1	+	179	1	Intergenic	novelGene_467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAGTAATCTATTCGT	NA	False	NA	NA	False	NA	NA	NA	150896147	150896326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_150896100_150896300
Isoform_98629_20	chr1	+	177	1	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAAGCAGAAA	NA	False	NA	NA	False	NA	NA	NA	17055999	17056176	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_17056000_17056200
Isoform_9863_39	chr10	+	474	1	Intergenic	novelGene_1034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79595144	79595618	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_79595100_79595600
Isoform_98631_7	chr1	-	1337	1	FSM	ENSMUSG00000100954.6	ENSMUST00000186597.2	2498	1	-35	1196	-35	-1196	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151221017	151219680	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_151219700_151221000
Isoform_98632_51	chr7	+	177	1	Intergenic	novelGene_10373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127107781	127107958	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_127107800_127108000
Isoform_98638_4	chr1	+	183	1	Intergenic	novelGene_469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATCAAACTATCAAT	NA	False	NA	NA	False	NA	NA	NA	151301182	151301365	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_151301200_151301400
Isoform_98640_5	chr1	-	175	1	Intergenic	novelGene_470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGTTTTTTAGCTGG	5214	False	NA	NA	False	NA	NA	NA	151340099	151339924	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_151339900_151340100
Isoform_98644_10	chr1	+	152	1	Intergenic	novelGene_471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAATAAATGTCACT	2239	False	NA	NA	False	NA	NA	NA	151365301	151365453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_151365300_151365500
Isoform_98647_4	chr1	+	6298	1	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17124774	17131072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_17124800_17131100
Isoform_98648_10	chr1	-	171	1	Intergenic	novelGene_472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCGGGCGGTGGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	151402311	151402140	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_151402100_151402300
Isoform_98650_7	chr1	-	163	1	Intergenic	novelGene_473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGGAAAAAAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	151431409	151431246	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_151431200_151431400
Isoform_98653_4	chr1	-	223	1	Intergenic	novelGene_474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACACCTTTATAACTTA	1818	False	NA	NA	False	NA	NA	NA	151518957	151518734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_151518700_151519000
Isoform_98655_5	chr1	-	194	1	Intergenic	novelGene_475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTGAAAGCTATT	NA	False	NA	NA	False	NA	NA	NA	151533676	151533482	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_151533500_151533700
Isoform_9866_11	chr10	+	2186	1	NIC	ENSMUSG00000035863.15	novel	2651	9	NA	NA	2	-11912	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	79629407	79631593	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_79629400_79631600
Isoform_98666_4	chr1	+	195	1	Intergenic	novelGene_476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGCAATGGAAAGTCCC	NA	False	NA	NA	False	NA	NA	NA	152186581	152186776	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_152186600_152186800
Isoform_98667_6	chr1	-	170	1	Intergenic	novelGene_477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTTAATAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	152207769	152207599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_152207600_152207800
Isoform_98668_3	chr1	-	5662	1	Antisense	novelGene_ENSMUSG00000008475.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-27	NA	152649402	152643740	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_152643700_152649400
Isoform_98669_3	chr1	+	1225	1	ISM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	7802	29	5845	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTGAATAATTTTTTTC	NA	False	NA	71	True	AATAAA	-6	NA	152650094	152651319	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_152650100_152651300
Isoform_9867_9	chr10	-	174	1	Intergenic	novelGene_1035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGTGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	79648969	79648795	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_79648800_79649000
Isoform_98670_6	chr1	+	172	1	Intergenic	novelGene_478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATAGGTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	152661335	152661507	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_152661300_152661500
Isoform_9868_36	chr10	-	180	1	Intergenic	novelGene_1036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGTGACTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	79673783	79673603	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_79673600_79673800
Isoform_98682_34	chr1	+	177	1	Antisense	novelGene_ENSMUSG00000099969.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152965079	152965256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_152965100_152965300
Isoform_98688_48	chr1	-	186	1	Intergenic	novelGene_479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACTTTAAAACTATTG	NA	False	NA	NA	False	AATAAA	-7	NA	153025917	153025731	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_153025700_153025900
Isoform_9870_5	chr10	-	419	1	FSM	ENSMUSG00000091994.3	ENSMUST00000217802.2	3420	1	827	2174	812	-2174	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	79689978	79689559	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79689600_79690000
Isoform_9871_3	chr10	-	584	1	FSM	ENSMUSG00000091994.3	ENSMUST00000217802.2	3420	1	660	2176	645	-2176	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	79690145	79689561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_-_79689600_79690100
Isoform_98713_44	chr1	-	179	1	Intergenic	novelGene_480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAAATTATATGCTT	NA	False	NA	NA	False	NA	NA	NA	153214185	153214006	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_153214000_153214200
Isoform_98714_51	chr1	+	174	2	Antisense	novelGene_ENSMUSG00000073538.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGCAAATGAAG	NA	False	NA	NA	False	NA	NA	NA	153287689	153292536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_153287768_153292440
Isoform_98715_12	chr1	-	663	1	NIC	ENSMUSG00000073538.11	novel	766	4	NA	NA	3	-7321	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAATAAATGA	NA	False	NA	NA	False	NA	NA	NA	153289976	153289313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_153289300_153290000
Isoform_98716_64	chr1	+	178	1	Intergenic	novelGene_481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAATGAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	153287689	153287867	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_153287700_153287900
Isoform_98718_16	chr1	+	176	1	Intergenic	novelGene_482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACACTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	153326080	153326256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_153326100_153326300
Isoform_98726_5	chr1	+	154	1	Intergenic	novelGene_483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTAAAAAAAAAAAGG	6397	False	NA	NA	False	NA	NA	NA	153357744	153357898	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_153357700_153357900
Isoform_98728_12	chr1	-	187	1	Intergenic	novelGene_484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAATAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	153365466	153365279	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_153365300_153365500
Isoform_98730_14	chr1	+	211	1	Intergenic	novelGene_485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGGTCACAGGTGTGC	NA	False	NA	NA	False	NA	NA	NA	153372938	153373149	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_153372900_153373100
Isoform_98731_346	chr1	-	176	1	Intergenic	novelGene_486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGACATGGTGGC	NA	False	NA	NA	False	NA	NA	NA	153376809	153376633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_153376600_153376800
Isoform_98733_135	chr1	-	248	1	Intergenic	novelGene_487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGGATGCC	NA	False	NA	48	True	NA	NA	NA	153385458	153385210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_153385200_153385500
Isoform_98734_4	chr1	+	174	1	Intergenic	novelGene_488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	153387590	153387764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_153387600_153387800
Isoform_98735_86	chr1	+	176	1	Intergenic	novelGene_489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	153393489	153393665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_153393500_153393700
Isoform_98737_63	chr1	-	176	1	Intergenic	novelGene_490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAATCCACG	6307	False	NA	NA	False	NA	NA	NA	153401480	153401304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_153401300_153401500
Isoform_98739_50	chr1	+	197	1	Intergenic	novelGene_491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	866	False	NA	NA	False	NA	NA	NA	153741403	153741600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_153741400_153741600
Isoform_98740_46	chr4	+	176	1	Intergenic	novelGene_7655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAGAAGTTAG	NA	False	NA	NA	False	NA	NA	NA	85681791	85681967	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr4_+_85681800_85682000
Isoform_98741_13	chr1	+	175	1	Intergenic	novelGene_492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	153971690	153971865	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_153971700_153971900
Isoform_98742_34	chr1	-	176	1	Intergenic	novelGene_493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	154030849	154030673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_154030700_154030800
Isoform_98743_19	chr1	+	176	1	Intergenic	novelGene_494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAACTGTCAATTC	NA	False	NA	NA	False	NA	NA	NA	154888595	154888771	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_154888600_154888800
Isoform_98745_45	chr1	-	2104	1	FSM	ENSMUSG00000056708.6	ENSMUST00000055322.6	3276	1	6	1166	6	-1166	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCACTGCCTGTTTGTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	154975376	154973272	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_154973300_154975400
Isoform_98746_3	chr1	-	2967	1	Genic_Genomic	ENSMUSG00000026469.15	novel	NA	NA	NA	NA	13404	44	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGACTCGTCACTGGTGA	4947	False	NA	44	True	NA	NA	NA	155154369	155151402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_155151400_155154400
Isoform_98747_6	chr1	-	187	1	Intergenic	novelGene_495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGGAAGAAAATGGAAA	NA	False	NA	NA	False	NA	NA	NA	155163747	155163560	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_155163600_155163700
Isoform_98748_30	chr1	+	179	1	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	18188670	18188849	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_18188700_18188800
Isoform_98749_6	chr1	-	181	1	Intergenic	novelGene_496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	155382196	155382015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_155382000_155382200
Isoform_98752_10	chr1	-	186	1	Intergenic	novelGene_497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	155552258	155552072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_155552100_155552300
Isoform_98754_3	chr1	-	180	1	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	18427977	18427797	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_18427800_18428000
Isoform_98755_7	chr1	+	196	1	Intergenic	novelGene_498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCAGAGCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	155840404	155840600	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_155840400_155840600
Isoform_98756_124	chr1	-	177	1	Intergenic	novelGene_499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	155897434	155897257	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_155897300_155897400
Isoform_98757_102	chr1	+	197	1	Intergenic	novelGene_500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGAAGTGTATTTGTAA	NA	False	NA	5	True	NA	NA	NA	155899492	155899689	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_155899500_155899700
Isoform_98758_14	chr1	+	1262	1	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	-9	-14691	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCGATTT	NA	False	NA	NA	False	NA	NA	NA	155911462	155912724	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_155911500_155912700
Isoform_9876_4	chr10	-	985	1	Genic_Genomic	ENSMUSG00000090860.2	novel	NA	NA	NA	NA	73	560	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTAAAAAAATAAAATCT	NA	False	NA	NA	False	TTTAAA	-19	NA	79700195	79699210	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_-_79699200_79700200
Isoform_98764_4	chr1	+	170	1	Intergenic	novelGene_501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	155958014	155958184	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_155958000_155958200
Isoform_98765_133	chr1	-	208	1	Intergenic	novelGene_502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AAGAAA	-9	NA	156015666	156015458	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_156015500_156015700
Isoform_98766_4	chr1	+	205	1	Intergenic	novelGene_503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATCTCTGTGGTCTCA	4958	False	NA	NA	False	AATAAA	-22	NA	156072790	156072995	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_156072800_156073000
Isoform_98767_9	chr1	+	177	1	Intergenic	novelGene_504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAACAACCAA	NA	False	NA	NA	False	NA	NA	NA	156110616	156110793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_156110600_156110800
Isoform_98769_3741	chr1	+	476	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	0	-31	0	31	mono-exon	FALSE	NA	NA	NA	NA	NA	3741	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	156193609	156194085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_156193600_156194100
Isoform_98778_12	chr1	+	173	1	Intergenic	novelGene_505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	156232117	156232290	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_156232100_156232300
Isoform_98781_125	chr1	+	2661	1	FSM	ENSMUSG00000101523.3	ENSMUST00000190422.3	2633	1	-9	-19	-9	19	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	156351572	156354233	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_156351600_156354200
Isoform_98782_7	chr1	-	162	1	Antisense	novelGene_ENSMUSG00000101523.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	156353326	156353164	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_156353200_156353300
Isoform_98785_4	chr1	+	170	1	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAACAAAA	9236	False	NA	NA	False	NA	NA	NA	19246842	19247012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_19246800_19247000
Isoform_98786_10	chr1	+	332	1	Intergenic	novelGene_506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	4865	False	NA	NA	False	NA	NA	NA	156370924	156371256	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_156370900_156371300
Isoform_98787_66	chr1	-	179	1	Intergenic	novelGene_507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	156385764	156385585	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_156385600_156385800
Isoform_98788_75	chr1	-	186	1	Intergenic	novelGene_508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTATTAAAAAAAAAAGATG	6851	False	NA	NA	False	NA	NA	NA	156424064	156423878	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_156423900_156424100
Isoform_98790_5	chr1	+	3988	1	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	86594	0	29658	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCAAGTTGTGTTTTG	2380	False	NA	29	True	AATAAA	-42	NA	156473150	156477138	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_156473200_156477100
Isoform_98794_5	chr1	+	1531	1	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	89047	4	32111	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTTTGCAAGTTGTGT	4833	False	NA	25	True	AATAAA	-38	NA	156475603	156477134	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_156475600_156477100
Isoform_98795_9	chr1	+	178	1	Intergenic	novelGene_509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGTTTATTTGTTT	2960	False	NA	NA	False	NA	NA	NA	156503365	156503543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_156503400_156503500
Isoform_98796_363	chr1	-	176	1	Intergenic	novelGene_510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACACACAC	NA	False	NA	NA	False	NA	NA	NA	156504692	156504516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_156504500_156504700
Isoform_98800_7	chr1	-	173	1	Intergenic	novelGene_511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156510605	156510432	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_156510400_156510600
Isoform_98804_204	chr1	+	198	1	Intergenic	novelGene_512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAATTAAAGCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	156540056	156540254	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_156540100_156540300
Isoform_98805_10	chr1	-	183	1	Intergenic	novelGene_513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAATGCTAATTTCTGG	NA	False	NA	NA	False	NA	NA	NA	156571222	156571039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_156571000_156571200
Isoform_98807_16	chr1	+	177	1	Intergenic	novelGene_514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	156706666	156706843	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_156706700_156706800
Isoform_98809_4	chr1	-	201	1	Intergenic	novelGene_515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACCATTTAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	156770590	156770389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_156770400_156770600
Isoform_98810_6	chr1	+	217	1	Intergenic	novelGene_516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAATAAAAGAAAAGTTACA	NA	False	NA	NA	False	NA	NA	NA	156777201	156777418	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_156777200_156777400
Isoform_98811_313	chr1	+	178	1	Intergenic	novelGene_517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	157052864	157053042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_157052900_157053000
Isoform_98812_23	chr1	-	220	1	Intergenic	novelGene_518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTTTCTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	157164157	157163937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_157163900_157164200
Isoform_98813_19	chr1	+	163	1	Intergenic	novelGene_519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATATATAAATCTTGAAA	NA	False	NA	NA	False	NA	NA	NA	157254201	157254364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_157254200_157254400
Isoform_98815_151	chr1	-	188	1	Intergenic	novelGene_520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157273107	157272919	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_157272900_157273100
Isoform_98816_3	chr1	-	389	1	Intergenic	novelGene_521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	157279780	157279391	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_157279400_157279800
Isoform_98817_4	chr1	-	175	1	Intergenic	novelGene_522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATATCTTTTTGTT	499	False	NA	NA	False	NA	NA	NA	157331898	157331723	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_157331700_157331900
Isoform_98818_12	chr1	+	169	1	Intergenic	novelGene_523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	157333706	157333875	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_157333700_157333900
Isoform_98819_3	chr1	-	176	1	Intergenic	novelGene_524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGAATTTACATG	NA	False	NA	NA	False	NA	NA	NA	158007220	158007044	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_158007000_158007200
Isoform_9882_40	chr10	-	177	1	Intergenic	novelGene_1037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4806	False	NA	NA	False	NA	NA	NA	79706897	79706720	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_79706700_79706900
Isoform_98820_4	chr1	-	177	1	Antisense	novelGene_ENSMUSG00000103762.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTATTATTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	158204959	158204782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_158204800_158205000
Isoform_98823_12	chr1	-	176	1	Intergenic	novelGene_525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTGGTGTAACT	NA	False	NA	NA	False	NA	NA	NA	159118349	159118173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_159118200_159118300
Isoform_98824_13	chr1	+	337	1	Intergenic	novelGene_527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAAAACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	159121419	159121756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_159121400_159121800
Isoform_9883_85	chr10	-	173	1	Intergenic	novelGene_1038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	79728692	79728519	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_79728500_79728700
Isoform_98835_75	chr1	+	191	1	Intergenic	novelGene_528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGGTTATTAAACTA	1430	False	NA	NA	False	NA	NA	NA	160046340	160046531	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_160046300_160046500
Isoform_98836_4	chr1	-	157	1	Intergenic	novelGene_529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	160157087	160156930	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_160156900_160157100
Isoform_98837_10	chr1	+	177	1	Intergenic	novelGene_530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATCAT	NA	False	NA	NA	False	NA	NA	NA	160187901	160188078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_160187900_160188100
Isoform_98838_87	chr1	+	156	1	Intergenic	novelGene_531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATCAAAGTGGAC	NA	False	NA	9	True	NA	NA	NA	160712191	160712347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_160712200_160712300
Isoform_98839_5	chr1	+	173	1	Intergenic	novelGene_532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAGAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	160749431	160749604	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_160749400_160749600
Isoform_9884_8	chr10	-	168	1	Intergenic	novelGene_729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	11183972	11183804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_11183800_11184000
Isoform_98840_84	chr1	-	178	1	Intergenic	novelGene_533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAAGGGAGAA	NA	False	NA	NA	False	NA	NA	NA	160750455	160750277	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_160750300_160750500
Isoform_98842_3	chr1	+	5404	1	ISM	ENSMUSG00000040423.12	ENSMUST00000239200.2	11121	21	63153	4	18594	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACAGTGTGTAGTCTTTT	4922	False	NA	12	True	ATTAAA	-18	NA	160797140	160802544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_160797100_160802500
Isoform_98843_3	chr1	+	805	1	ISM	ENSMUSG00000040423.12	ENSMUST00000239200.2	11121	21	67750	6	23191	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAACAGTGTGTAGTCTT	9519	False	NA	10	True	ATTAAA	-16	NA	160801737	160802542	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_160801700_160802500
Isoform_98844_10	chr1	+	168	1	Intergenic	novelGene_534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCAAAACCAAAACC	NA	False	NA	NA	False	NA	NA	NA	160848423	160848591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_160848400_160848600
Isoform_98847_144	chr1	+	3373	1	FSM	ENSMUSG00000065160.3	ENSMUST00000083226.3	84	1	-2190	-1099	-2190	1099	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_160862700_160866100
Isoform_9885_14	chr10	+	196	1	Intergenic	novelGene_1039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATCAGGCCCCAGCT	5223	False	NA	NA	False	NA	NA	NA	79760337	79760533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_79760300_79760500
Isoform_98855_5	chr1	+	376	1	Antisense	novelGene_ENSMUSG00000041859.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTACTGGAGGATGG	NA	False	NA	NA	False	NA	NA	NA	20873240	20873616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_20873200_20873600
Isoform_98856_32	chr1	-	177	1	Intergenic	novelGene_535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAG	2604	False	NA	NA	False	NA	NA	NA	160876058	160875881	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_160875900_160876100
Isoform_98857_67	chr1	-	176	1	Intergenic	novelGene_536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAAGAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	160895595	160895419	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_160895400_160895600
Isoform_98858_35	chr1	-	177	1	Intergenic	novelGene_537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGCAGTAATACA	NA	False	NA	NA	False	NA	NA	NA	160921916	160921739	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_160921700_160921900
Isoform_98859_3	chr1	-	283	1	Antisense	novelGene_ENSMUSG00000044835.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	160978837	160978554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_160978600_160978800
Isoform_98860_3	chr1	+	158	1	Intergenic	novelGene_538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	161024168	161024326	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_161024200_161024300
Isoform_98866_3	chr1	+	174	1	Intergenic	novelGene_539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	161070643	161070817	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_161070600_161070800
Isoform_98867_34	chr1	-	2559	1	FSM	ENSMUSG00000026701.16	ENSMUST00000194613.2	2558	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	161078732	161076173	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_161076200_161078700
Isoform_98871_39	chr1	+	169	1	Intergenic	novelGene_540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGC	9302	False	NA	NA	False	NA	NA	NA	161160288	161160457	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_161160300_161160500
Isoform_98874_22	chr1	+	219	1	Intergenic	novelGene_542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATACATGAAGATAAGAA	NA	False	NA	NA	False	NA	NA	NA	161908755	161908974	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_161908800_161909000
Isoform_9888_3	chr10	+	2459	1	ISM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	7571	22	688	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAACAAACAAA	9857	False	NA	NA	False	NA	NA	NA	79803556	79806015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_79803600_79806000
Isoform_98881_9	chr1	+	177	1	Intergenic	novelGene_544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTAAATTTTGGT	NA	False	NA	NA	False	NA	NA	NA	163162898	163163075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_163162900_163163100
Isoform_98883_7	chr1	+	219	1	Intergenic	novelGene_545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGGAGCAGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	163846849	163847068	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_163846800_163847100
Isoform_98886_43	chr1	+	177	1	Intergenic	novelGene_546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATTTTAA	3984	False	NA	NA	False	NA	NA	NA	163955315	163955492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_163955300_163955500
Isoform_9889_4	chr10	+	2020	1	NIC	ENSMUSG00000004665.11	novel	2460	7	NA	NA	16	-4065	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAAGATTAAAAAAAAA	1785	False	NA	NA	False	NA	NA	NA	79824433	79826453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_79824400_79826500
Isoform_98892_16	chr1	-	177	1	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGATAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21131279	21131102	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_21131100_21131300
Isoform_98894_12	chr2	-	177	1	Intergenic	novelGene_6217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	49900112	49899935	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_49899900_49900100
Isoform_9890_8	chr10	+	2807	1	Genic_Genomic	ENSMUSG00000035722.16	novel	NA	NA	NA	NA	-10	-16263	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACACAAAACAAAACAAAAG	6000	False	NA	NA	False	NA	NA	NA	79832317	79835124	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr10_+_79832300_79835100
Isoform_98904_3	chr1	+	1696	1	Intergenic	novelGene_547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	7954	False	NA	NA	False	TTTAAA	-24	NA	164286068	164287764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_164286100_164287800
Isoform_98905_3	chr1	+	2889	1	Intergenic	novelGene_548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-42	NA	164292003	164294892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_164292000_164294900
Isoform_98906_46	chr1	+	184	1	Intergenic	novelGene_549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGGTTTAGCACCCTCA	NA	False	NA	NA	False	NA	NA	NA	164359081	164359265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_164359100_164359300
Isoform_98909_3	chr1	-	1863	1	NIC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	-1	-13222	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165021891	165020028	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_165020000_165021900
Isoform_98914_4	chr1	+	4417	1	Genic_Genomic	ENSMUSG00000040836.16	novel	NA	NA	NA	NA	22777	3071	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165152968	165157385	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_165153000_165157400
Isoform_98915_12	chr12	+	210	1	Intergenic	novelGene_2784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCTAGTTTCATAAAAC	NA	False	NA	NA	False	NA	NA	NA	101003313	101003523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_101003300_101003500
Isoform_98919_21	chr1	-	171	1	Intergenic	novelGene_552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	165439502	165439331	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_165439300_165439500
Isoform_98921_5	chr1	-	180	1	Intergenic	novelGene_553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGAAATACAAGAC	7439	False	NA	NA	False	NA	NA	NA	165594519	165594339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_165594300_165594500
Isoform_98922_4	chr1	+	159	1	Intergenic	novelGene_554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	165612862	165613021	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_165612900_165613000
Isoform_98929_15	chr1	-	160	1	Intergenic	novelGene_556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAATAAATAA	7040	False	NA	NA	False	NA	NA	NA	165996327	165996167	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_165996200_165996300
Isoform_98930_5	chr7	+	207	1	Intergenic	novelGene_10253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGCAGAAACATGGGCT	NA	False	NA	NA	False	NA	NA	NA	105238104	105238311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr7_+_105238100_105238300
Isoform_98931_7	chr1	+	174	1	Intergenic	novelGene_558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGACAGATACTTT	4091	False	NA	NA	False	NA	NA	NA	167005555	167005729	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_167005600_167005700
Isoform_98932_3	chr1	+	173	1	Intergenic	novelGene_559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAGAAGAAGACAA	NA	False	NA	NA	False	NA	NA	NA	167037021	167037194	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_167037000_167037200
Isoform_98946_7	chr1	+	2924	1	Antisense	novelGene_ENSMUSG00000026558.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTCCAGTTTCAAGGA	NA	False	NA	NA	False	AATAGA	-10	NA	167050464	167053388	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_167050500_167053400
Isoform_9895_44	chr10	+	182	1	Intergenic	novelGene_1040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAAAC	2954	False	NA	NA	False	NA	NA	NA	79877464	79877646	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_79877500_79877600
Isoform_9896_4	chr10	+	164	1	Intergenic	novelGene_1041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGCAAAACAAAC	1064	False	NA	NA	False	NA	NA	NA	79880727	79880891	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_79880700_79880900
Isoform_98968_6	chr1	+	2142	1	Intergenic	novelGene_560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167075657	167077799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_167075700_167077800
Isoform_98970_8	chr1	+	1826	1	Intergenic	novelGene_561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTATTGCAAATGACCTG	9642	False	NA	NA	False	NA	NA	NA	167098760	167100586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_167098800_167100600
Isoform_98972_58	chr1	+	178	1	Intergenic	novelGene_562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	167107376	167107554	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_167107400_167107600
Isoform_98975_17	chr1	-	187	1	Intergenic	novelGene_563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGTAAATTGCTTAA	NA	False	NA	NA	False	NA	NA	NA	167128313	167128126	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_167128100_167128300
Isoform_98976_10	chr1	-	529	1	Antisense	novelGene_ENSMUSG00000052428.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	167136162	167135633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_167135600_167136200
Isoform_98977_6	chr1	-	611	1	Antisense	novelGene_ENSMUSG00000052428.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	167136244	167135633	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_167135600_167136200
Isoform_98980_49	chr1	+	178	1	Intergenic	novelGene_565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAACAAACAC	NA	False	NA	NA	False	NA	NA	NA	167166056	167166234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_167166100_167166200
Isoform_98982_13	chr1	-	177	1	Intergenic	novelGene_566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACTTCAAAAGTTAAGC	NA	False	NA	NA	False	NA	NA	NA	167173735	167173558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_167173600_167173700
Isoform_98985_3	chr1	+	175	1	Intergenic	novelGene_567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATACTTTGTCACTGG	NA	False	NA	NA	False	NA	NA	NA	167211538	167211713	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_167211500_167211700
Isoform_98986_9	chr1	-	187	1	Intergenic	novelGene_568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGCTAGGCTGGATGTT	NA	False	NA	NA	False	NA	NA	NA	167247055	167246868	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_167246900_167247100
Isoform_98988_13	chr1	-	173	1	Intergenic	novelGene_569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTTAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	167477599	167477426	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_167477400_167477600
Isoform_9899_628	chr10	-	175	1	Intergenic	novelGene_1042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	628	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAATTGTGTTCGG	NA	False	NA	NA	False	NA	NA	NA	79947840	79947665	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_79947700_79947800
Isoform_98992_12	chr1	-	163	1	Intergenic	novelGene_570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGGAACTCGGAAAA	NA	False	NA	NA	False	NA	NA	NA	168272176	168272013	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_168272000_168272200
Isoform_98993_22	chr1	-	177	1	Intergenic	novelGene_571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATAAAATGTTGCTAT	NA	False	NA	NA	False	NA	NA	NA	168276514	168276337	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_168276300_168276500
Isoform_98995_6	chr1	-	6227	1	Intergenic	novelGene_572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGAACACTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	168457011	168450784	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_168450800_168457000
Isoform_98996_105	chr9	-	176	1	Intergenic	novelGene_11385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATTTTTTTTTCTT	261	False	NA	NA	False	NA	NA	NA	64185849	64185673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_-_64185700_64185800
Isoform_99_119	ERCC-00095	+	508	1	FSM	ERCC-00095A	DQ516759	513	1	2	3	2	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAT	NA	False	NA	NA	False	NA	NA	NA	2	510	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_ERCC-00095_+_0_500
Isoform_99012_3	chr1	-	761	1	FSM	ENSMUSG00000096964.2	ENSMUST00000180900.2	204	1	-152	-405	7	405	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGTGTGGTTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	170083301	170082540	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_170082500_170083300
Isoform_99014_32	chr1	-	181	1	Intergenic	novelGene_573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTCAT	8036	False	NA	NA	False	NA	NA	NA	170636349	170636168	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_170636200_170636300
Isoform_99016_22	chr1	+	177	1	Intergenic	novelGene_574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	170686367	170686544	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_170686400_170686500
Isoform_99017_16	chr1	-	1620	1	NIC	ENSMUSG00000026659.14	novel	1875	5	NA	NA	4454	1739	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCAAAAAAAAACCCCCA	NA	False	NA	NA	False	NA	NA	NA	170708119	170706499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_170706500_170708100
Isoform_99019_10	chr1	-	1539	1	NIC	ENSMUSG00000026659.14	novel	1875	5	NA	NA	-11	-3210	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTCGGAAACAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	170712987	170711448	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_170711400_170713000
Isoform_99020_68	chr12	+	177	1	Intergenic	novelGene_2503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	31387347	31387524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr12_+_31387300_31387500
Isoform_99021_9	chr1	+	168	1	Intergenic	novelGene_576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATATTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	170759410	170759578	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_170759400_170759600
Isoform_99024_5	chr1	+	238	1	Intergenic	novelGene_577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	NA	False	NA	NA	False	AAAACA	-37	NA	170884329	170884567	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_170884300_170884600
Isoform_99025_14	chr1	+	158	1	Intergenic	novelGene_578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	170914949	170915107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_170914900_170915100
Isoform_99028_3	chr1	+	169	1	Intergenic	novelGene_579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	170972893	170973062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_170972900_170973100
Isoform_99029_13	chr1	+	181	1	Intergenic	novelGene_580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGGTGGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	170974183	170974364	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_170974200_170974400
Isoform_99031_5	chr1	+	182	1	Intergenic	novelGene_581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGAGTTCTGAGGATCT	7939	False	NA	NA	False	NA	NA	NA	171006518	171006700	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171006500_171006700
Isoform_99032_7	chr1	+	175	1	Intergenic	novelGene_582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGTAGCATCTGAGG	NA	False	NA	NA	False	NA	NA	NA	171009383	171009558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171009400_171009600
Isoform_99033_18	chr1	+	177	1	Intergenic	novelGene_583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	2052	False	NA	NA	False	NA	NA	NA	171034908	171035085	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171034900_171035100
Isoform_99034_44	chr1	+	177	1	Intergenic	novelGene_584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	2599	False	NA	NA	False	NA	NA	NA	171035455	171035632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171035500_171035600
Isoform_99036_227	chr1	+	173	1	Intergenic	novelGene_585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	171089370	171089543	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171089400_171089500
Isoform_99038_121	chr1	+	176	1	Intergenic	novelGene_587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	171095777	171095953	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171095800_171096000
Isoform_9904_112	chr10	+	1233	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	16	-636	16	636	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAGATCTGCA	NA	False	NA	NA	False	NA	NA	NA	11484982	11486215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr10_+_11485000_11486200
Isoform_99040_164	chr1	+	193	1	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTGACAAAACATACACAT	NA	False	NA	NA	False	NA	NA	NA	22446159	22446352	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_22446200_22446400
Isoform_99041_11	chr1	+	2678	1	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	0	401	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTTACTAAGT	NA	False	NA	NA	False	NA	NA	NA	171097897	171100575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_171097900_171100600
Isoform_99045_35	chr1	+	183	1	Intergenic	novelGene_588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAAAAACA	7857	False	NA	NA	False	NA	NA	NA	171133959	171134142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171134000_171134100
Isoform_99047_40	chr1	-	210	1	Intergenic	novelGene_589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTATACACACTCTAGC	NA	False	NA	NA	False	AATAAA	-14	NA	171138416	171138206	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_171138200_171138400
Isoform_99048_68	chr1	+	2219	1	Intergenic	novelGene_590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	171140046	171142265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171140000_171142300
Isoform_99055_69	chr1	+	1686	1	Intergenic	novelGene_591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	171140579	171142265	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171140600_171142300
Isoform_99069_13	chr1	+	166	1	Intergenic	novelGene_593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTTAAAAAAAAAAAAAAA	9158	False	NA	NA	False	NA	NA	NA	171261333	171261499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171261300_171261500
Isoform_99078_6	chr1	-	205	1	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGTTCAGTATATTCAA	NA	False	NA	NA	False	TATAAA	-12	NA	22579879	22579674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_22579700_22579900
Isoform_99079_52	chr1	+	175	1	Intergenic	novelGene_595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAG	4178	False	NA	NA	False	NA	NA	NA	171292253	171292428	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171292300_171292400
Isoform_99081_7	chr1	-	178	1	Intergenic	novelGene_596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	171300701	171300523	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_171300500_171300700
Isoform_99082_5	chr1	+	1210	1	FSM	ENSMUSG00000060244.2	ENSMUST00000081527.2	1273	1	-40	103	-40	-103	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACAATATGACTTTTAT	1367	False	NA	NA	False	NA	NA	NA	171331005	171332215	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_171331000_171332200
Isoform_99087_13	chr1	+	183	1	Intergenic	novelGene_597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTAAAAAGGGACA	NA	False	NA	NA	False	NA	NA	NA	171450484	171450667	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171450500_171450700
Isoform_9909_6	chr10	-	161	1	Intergenic	novelGene_1043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAAAAAAACCCA	9579	False	NA	NA	False	NA	NA	NA	80009272	80009111	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80009100_80009300
Isoform_99090_11	chr1	+	177	1	ISM	ENSMUSG00000015316.12	ENSMUST00000163992.3	4420	5	26061	2439	26061	-2439	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAT	1553	False	NA	NA	False	NA	NA	NA	171620783	171620960	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_+_171620800_171621000
Isoform_99093_7	chr1	-	1479	1	ISM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	24857	0	6591	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGTTTTCTGTTGCTT	NA	False	NA	-7	True	AATAAA	-15	NA	171830005	171828526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_171828500_171830000
Isoform_99095_4	chr1	-	2752	1	ISM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	23584	0	5318	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGTTTTCTGTTGCTT	9921	False	NA	-7	True	AATAAA	-15	NA	171831278	171828526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_171828500_171831300
Isoform_99097_4	chr1	-	172	1	Intergenic	novelGene_598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	171859109	171858937	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_171858900_171859100
Isoform_99098_26	chr1	-	182	1	Intergenic	novelGene_599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGCACTT	NA	False	NA	NA	False	NA	NA	NA	171859700	171859518	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_171859500_171859700
Isoform_99099_15	chr1	+	289	1	Intergenic	novelGene_601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTTTGGGCAGGATT	NA	False	NA	NA	False	GGGGCT	-43	NA	171879015	171879304	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_171879000_171879300
Isoform_99101_32	chr1	-	177	1	Intergenic	novelGene_602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	171959254	171959077	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_171959100_171959300
Isoform_99104_34	chr1	-	177	1	Intergenic	novelGene_603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	171985611	171985434	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_171985400_171985600
Isoform_99108_5	chr1	+	2583	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	-84	5055	-84	-5055	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGAGCCTGTCTGTG	5366	False	NA	30	True	AATAAA	-43	NA	172204028	172206611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_172204000_172206600
Isoform_9911_27	chr10	+	174	1	Intergenic	novelGene_1044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATACATTTGTG	NA	False	NA	NA	False	NA	NA	NA	80039153	80039327	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80039200_80039300
Isoform_99110_109	chr1	+	2481	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	18	5055	18	-5055	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGAGCCTGTCTGTG	5468	False	NA	30	True	AATAAA	-43	NA	172204130	172206611	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_172204100_172206600
Isoform_99111_5	chr1	+	7110	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	-20	464	-20	-464	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGTCTGTTTTGTTTTTT	5430	False	NA	NA	False	ATTAAA	-29	NA	172204092	172211202	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_172204100_172211200
Isoform_99115_4	chr1	+	7405	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	7	142	7	-142	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTGAATATATTGTTCT	5457	False	NA	10	True	TATAAA	-17	NA	172204119	172211524	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_172204100_172211500
Isoform_99117_3	chr1	+	155	1	Intergenic	novelGene_604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	172253542	172253697	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_172253500_172253700
Isoform_99119_10	chr1	+	217	1	Intergenic	novelGene_605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTAAGATTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	172255071	172255288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_172255100_172255300
Isoform_99120_20	chr1	+	171	1	Intergenic	novelGene_606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTTGAGAACT	NA	False	NA	NA	False	NA	NA	NA	172274104	172274275	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_172274100_172274300
Isoform_99123_17	chr1	+	1365	1	NIC	ENSMUSG00000026547.16	novel	1101	2	NA	NA	10	-4233	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	172327821	172329186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_172327800_172329200
Isoform_99127_57	chr1	+	176	1	Intergenic	novelGene_608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGTTACAGA	972	False	NA	NA	False	NA	NA	NA	172436277	172436453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_172436300_172436500
Isoform_99128_5	chr1	+	2238	1	Intergenic	novelGene_609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	174098777	174101015	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_174098800_174101000
Isoform_9913_13	chr10	+	177	1	Intergenic	novelGene_1045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	80	False	NA	NA	False	NA	NA	NA	80047335	80047512	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80047300_80047500
Isoform_99130_13	chr1	+	194	1	Intergenic	novelGene_610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	174275166	174275360	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_174275200_174275400
Isoform_99132_48	chr1	-	176	1	Intergenic	novelGene_611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGAACCTTTC	NA	False	NA	NA	False	NA	NA	NA	174374164	174373988	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_174374000_174374200
Isoform_99133_19	chr1	-	3819	1	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	23825272	23821453	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_23821500_23825300
Isoform_99136_11	chr1	+	198	1	Intergenic	novelGene_612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAATGTGAGAATTG	NA	False	NA	NA	False	NA	NA	NA	175713637	175713835	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_175713600_175713800
Isoform_99137_8	chr1	+	183	1	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAATTAGTCT	NA	False	NA	NA	False	NA	NA	NA	23895716	23895899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_23895700_23895900
Isoform_99140_3	chr1	-	186	1	Intergenic	novelGene_613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGTGACTTAAATGG	NA	False	NA	NA	False	NA	NA	NA	175829006	175828820	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_175828800_175829000
Isoform_99141_3	chr1	-	2316	1	ISM	ENSMUSG00000057335.12	ENSMUST00000057037.13	6930	20	71147	9	7127	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176563543	176561227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_176561200_176563500
Isoform_99142_3	chr1	-	1551	1	Antisense	novelGene_ENSMUSG00000103367.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTACTGGCTGGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	176663739	176662188	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_176662200_176663700
Isoform_99148_28	chr1	+	172	1	Intergenic	novelGene_614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	177465457	177465629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_177465500_177465600
Isoform_99155_38	chr1	+	168	1	Intergenic	novelGene_615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGAAATGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	177630621	177630789	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_177630600_177630800
Isoform_99157_4	chr1	-	5006	1	Antisense	novelGene_ENSMUSG00000026502.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATGTCTCCTAAGTTA	NA	False	NA	NA	False	NA	NA	NA	178047739	178042733	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_178042700_178047700
Isoform_99158_16	chr1	+	185	1	Intergenic	novelGene_616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	178070450	178070635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_178070400_178070600
Isoform_99160_5	chr1	+	176	1	Intergenic	novelGene_617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCACTTTGTTAC	NA	False	NA	NA	False	NA	NA	NA	178087015	178087191	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_178087000_178087200
Isoform_99161_15	chr1	-	195	1	Intergenic	novelGene_618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAGAAAATGAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	178140683	178140488	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_178140500_178140700
Isoform_99162_5	chr1	+	3839	1	Genic_Genomic	ENSMUSG00000026500.7	novel	NA	NA	NA	NA	-282	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGTATTGTTTTACAT	NA	False	NA	13	True	ATTAAA	-16	NA	178146412	178150251	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_178146400_178150300
Isoform_99168_4	chr1	+	671	1	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCAGGCACTTCCTCTTG	NA	False	NA	NA	False	AAAAAG	-4	NA	178156134	178156805	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_178156100_178156800
Isoform_9917_6	chr10	-	175	1	Intergenic	novelGene_1046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAC	9145	False	NA	NA	False	NA	NA	NA	80108843	80108668	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80108700_80108800
Isoform_99174_3	chr1	+	5017	1	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAGTTTAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-1	NA	178158945	178163962	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_178158900_178164000
Isoform_99179_3	chr1	+	340	1	Intergenic	novelGene_619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	178198782	178199122	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_178198800_178199100
Isoform_99182_4	chr1	-	174	1	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	4991408	4991234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_4991200_4991400
Isoform_99183_18	chr1	+	2030	1	Intergenic	novelGene_620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	178964957	178966987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_178965000_178967000
Isoform_99186_30	chr1	+	177	1	Intergenic	novelGene_621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	179046738	179046915	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_179046700_179046900
Isoform_99188_6	chr1	+	5181	1	Intergenic	novelGene_622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	AGTAAA	-12	NA	179324502	179329683	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_179324500_179329700
Isoform_99189_19	chr1	+	215	1	Intergenic	novelGene_623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAACATCCTCAGCTA	NA	False	NA	NA	False	NA	NA	NA	179333312	179333527	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_179333300_179333500
Isoform_99197_7	chr1	+	171	1	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAAGCTACACT	NA	False	NA	NA	False	NA	NA	NA	24156380	24156551	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_24156400_24156600
Isoform_99198_7	chr1	-	180	1	Intergenic	novelGene_625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAATAAAAAAAGCTGC	NA	False	NA	NA	False	NA	NA	NA	179566069	179565889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_179565900_179566100
Isoform_99199_19	chr1	-	182	1	Intergenic	novelGene_626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATGAAGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	179685108	179684926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_179684900_179685100
Isoform_99200_3	chr1	+	2440	1	Genic_Genomic	ENSMUSG00000026490.19	novel	NA	NA	NA	NA	2158	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTATTCTATTTCTT	NA	False	NA	3	True	AATAAA	-16	NA	179990729	179993169	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_179990700_179993200
Isoform_99201_12	chr1	+	183	1	Intergenic	novelGene_627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAAAGGAACGGCTG	NA	False	NA	NA	False	NA	NA	NA	180041106	180041289	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_180041100_180041300
Isoform_99202_4	chr1	-	2881	1	NIC	ENSMUSG00000010609.16	novel	1997	11	NA	NA	2	-7724	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAATAAAAAAA	NA	False	NA	NA	False	AAAACA	-30	NA	180083807	180080926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_180080900_180083800
Isoform_99203_57	chr1	-	177	1	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGACAGA	NA	False	NA	NA	False	NA	NA	NA	24355549	24355372	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_24355400_24355500
Isoform_99204_59	chr1	-	178	1	Intergenic	novelGene_628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATAATGTGTG	NA	False	NA	NA	False	NA	NA	NA	180147357	180147179	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_180147200_180147400
Isoform_99207_7	chr1	+	201	1	Intergenic	novelGene_629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTACATAACCTAAGACC	4052	False	NA	NA	False	NA	NA	NA	180378991	180379192	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_180379000_180379200
Isoform_99208_3	chr1	-	695	1	FSM	ENSMUSG00000067736.3	ENSMUST00000088336.3	294	1	0	-401	0	401	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGGAACCAAACTGAACG	NA	False	NA	NA	False	NA	NA	NA	24651781	24651086	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24651100_24651800
Isoform_99209_3	chr1	-	293	1	FSM	ENSMUSG00000100131.2	ENSMUST00000187714.2	876	1	123	460	123	-460	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAACGCCTAAACGCAG	NA	False	NA	NA	False	NA	NA	NA	24651368	24651075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24651100_24651400
Isoform_99213_3	chr1	-	3991	1	Antisense	novelGene_ENSMUSG00000026496.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180407108	180403117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_180403100_180407100
Isoform_99214_1043	chr2	-	169	1	Intergenic	novelGene_6757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1043	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165758383	165758214	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_165758200_165758400
Isoform_99219_4	chr1	-	456	1	Antisense	novelGene_ENSMUSG00000026496.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTCTACTGCCAGCT	NA	False	NA	NA	False	NA	NA	NA	180428819	180428363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_180428400_180428800
Isoform_99222_11	chr1	+	167	1	Intergenic	novelGene_630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGCTGATTTGGGG	7675	False	NA	NA	False	NA	NA	NA	180431128	180431295	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_180431100_180431300
Isoform_99224_904	chr1	-	346	1	FSM	ENSMUSG00000101939.2	ENSMUST00000188299.2	345	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	904	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGTAATTAGTTTAAAAA	NA	False	NA	NA	False	AAAAAG	-20	NA	24652199	24651853	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24651900_24652200
Isoform_99230_8	chr1	+	173	1	Intergenic	novelGene_631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	180466220	180466393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_180466200_180466400
Isoform_99234_6365	chr1	-	784	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCTTAGTATAATTAATA	NA	False	NA	NA	False	NA	NA	NA	24653051	24652267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24652300_24653100
Isoform_99252_6368	chr1	-	841	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	-161	-2	-161	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6368	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACCCACCAAACTCATGC	NA	False	NA	NA	False	AATACA	-3	NA	24653893	24653052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24653100_24653900
Isoform_99254_4	chr1	+	905	1	Antisense	novelGene_ENSMUSG00000101111.2_AS_novelGene_ENSMUSG00000100862.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTGAAATTAAATTATTGA	NA	False	NA	NA	False	NA	NA	NA	24653049	24653954	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_24653000_24654000
Isoform_9926_5	chr10	+	317	1	Intergenic	novelGene_1047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGTGCCAAGCCTCAAA	1317	False	NA	NA	False	NA	NA	NA	80160076	80160393	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80160100_80160400
Isoform_99271_10	chr1	+	198	1	Intergenic	novelGene_632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTAACTTTTGTG	3008	False	NA	NA	False	NA	NA	NA	180544598	180544796	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_180544600_180544800
Isoform_99274_5	chr1	+	1063	1	Intergenic	novelGene_633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAGA	7144	False	NA	NA	False	NA	NA	NA	180605408	180606471	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_180605400_180606500
Isoform_99275_5	chr1	-	190	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTCAAGTACTATGTTG	NA	False	NA	NA	False	NA	NA	NA	5021238	5021048	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_5021000_5021200
Isoform_99277_263	chrM	+	373	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	314	-3	314	3	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTATGAAGCTAAGAGCGT	288	False	NA	NA	False	ACTAAA	-38	NA	7326	7699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_7300_7700
Isoform_99278_94	chrM	+	526	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	161	-3	161	3	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTATGAAGCTAAGAGCGT	135	False	NA	NA	False	ACTAAA	-38	NA	7173	7699	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_7200_7700
Isoform_9928_26	chr10	+	3038	1	NIC	ENSMUSG00000035504.17	novel	2208	6	NA	NA	4	-1246	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	7223	False	NA	NA	False	NA	NA	NA	80165982	80169020	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80166000_80169000
Isoform_99284_7	chrM	+	312	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	0	372	0	-372	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAAGCTACGAATATAC	-1	True	NA	NA	False	NA	NA	NA	7012	7324	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chrM_+_7000_7300
Isoform_9929_28	chr10	+	176	1	Intergenic	novelGene_1048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGATCTTGAA	2269	False	NA	NA	False	NA	NA	NA	80181990	80182166	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80182000_80182200
Isoform_99290_5	chr1	-	443	1	FSM	ENSMUSG00000101249.2	ENSMUST00000187117.2	492	1	37	12	37	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGTAAAATAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	24655241	24654798	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_24654800_24655200
Isoform_99292_257	chr1	-	177	1	Intergenic	novelGene_634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180610363	180610186	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_180610200_180610400
Isoform_99293_156	chr1	-	177	1	Intergenic	novelGene_635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180627418	180627241	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_180627200_180627400
Isoform_9930_18	chr10	-	180	1	Intergenic	novelGene_1049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	80183031	80182851	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80182900_80183000
Isoform_99301_5	chr1	+	186	1	Intergenic	novelGene_636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTATTC	5332	False	NA	NA	False	NA	NA	NA	180646684	180646870	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_180646700_180646900
Isoform_99304_5	chr1	-	3164	1	Antisense	novelGene_ENSMUSG00000066652.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180721990	180718826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_180718800_180722000
Isoform_99305_25	chr1	-	2325	1	Antisense	novelGene_ENSMUSG00000066652.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGTGTTTTTATTAT	NA	False	NA	NA	False	TATAAA	-7	NA	180721989	180719664	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_180719700_180722000
Isoform_99321_8	chr1	-	245	1	Intergenic	novelGene_638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAAACTCAGGATTCAC	NA	False	NA	NA	False	NA	NA	NA	180753319	180753074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_180753100_180753300
Isoform_99323_4	chr1	-	174	1	Intergenic	novelGene_639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTTTAACAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	180778603	180778429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_180778400_180778600
Isoform_99326_148	chr1	-	188	1	Intergenic	novelGene_640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	180864736	180864548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_180864500_180864700
Isoform_99327_4	chr1	-	174	1	Intergenic	novelGene_641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAAAGGAAA	5147	False	NA	NA	False	NA	NA	NA	180889277	180889103	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_180889100_180889300
Isoform_99328_8	chr1	+	185	1	Intergenic	novelGene_642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTAGCAC	440	False	NA	NA	False	NA	NA	NA	180893707	180893892	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_180893700_180893900
Isoform_99329_33	chr1	-	174	1	Intergenic	novelGene_643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTATTTTATCC	846	False	NA	NA	False	NA	NA	NA	180946737	180946563	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_180946600_180946700
Isoform_99330_4	chr1	+	424	1	Genic_Genomic	ENSMUSG00000062169.14	novel	NA	NA	NA	NA	-265	-21397	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCTCAGGGGGAAAAAACA	NA	False	NA	NA	False	ATTAAA	-38	NA	180971992	180972416	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_180972000_180972400
Isoform_99339_7	chr1	-	3542	1	ISM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	35209	0	6970	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCGTTGCGTTCCATC	NA	False	NA	-3	True	AATAAA	-19	NA	181004334	181000792	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_181000800_181004300
Isoform_99344_17	chr1	+	177	1	Intergenic	novelGene_644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181018854	181019031	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181018900_181019000
Isoform_99345_3	chr1	+	2319	1	Intergenic	novelGene_645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAACAAAAACAAACAAA	3975	False	NA	NA	False	NA	NA	NA	181039593	181041912	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181039600_181041900
Isoform_99346_20	chr1	+	174	1	Intergenic	novelGene_646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	38	False	NA	NA	False	NA	NA	NA	181051295	181051469	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181051300_181051500
Isoform_99347_165	chr1	+	184	1	Intergenic	novelGene_648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTTTTCTTTATTCTTT	2063	False	NA	NA	False	NA	NA	NA	181064129	181064313	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181064100_181064300
Isoform_99351_11	chr1	-	341	1	FSM	ENSMUSG00000081214.4	ENSMUST00000117444.2	333	1	36	-44	36	44	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	181069849	181069508	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_181069500_181069800
Isoform_99353_4	chr1	-	431	1	FSM	ENSMUSG00000081214.4	ENSMUST00000117444.2	333	1	-62	-36	-62	36	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTCTTGTAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	181069947	181069516	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_181069500_181069900
Isoform_99354_3	chr1	+	4036	1	Intergenic	novelGene_649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181078837	181082873	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181078800_181082900
Isoform_99359_45	chrX	+	179	1	Intergenic	novelGene_12283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157572289	157572468	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chrX_+_157572300_157572500
Isoform_99366_6	chr1	+	1447	1	Genic_Genomic	ENSMUSG00000047369.18	novel	NA	NA	NA	NA	1885	1015	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTAGTTCATTTGGACT	NA	False	NA	NA	False	AAAACA	-25	NA	181642907	181644354	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_181642900_181644400
Isoform_99372_10	chr1	+	169	1	Intergenic	novelGene_651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	181662119	181662288	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181662100_181662300
Isoform_99374_3	chr1	-	169	1	Intergenic	novelGene_653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181684026	181683857	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_181683900_181684000
Isoform_99377_5	chr1	+	1387	1	Antisense	novelGene_ENSMUSG00000022995.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACTGAACTTATAAAACA	NA	False	NA	NA	False	AATACA	-31	NA	181727691	181729078	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_181727700_181729100
Isoform_99387_27	chr1	+	209	1	Intergenic	novelGene_654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGTTGTGTAGTTAGG	NA	False	NA	NA	False	AATACA	-19	NA	181745452	181745661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181745500_181745700
Isoform_99389_43	chr8	-	177	1	Intergenic	novelGene_10792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATATTA	NA	False	NA	NA	False	NA	NA	NA	87387216	87387039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_87387000_87387200
Isoform_99391_18	chr18	+	175	1	Antisense	novelGene_ENSMUSG00000118131.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATTGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	67284172	67284347	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr18_+_67284200_67284300
Isoform_99392_31	chr1	+	169	1	Antisense	novelGene_ENSMUSG00000102760.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	181834973	181835142	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_181835000_181835100
Isoform_99398_7	chr1	+	219	1	Intergenic	novelGene_658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAAATAAGTGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	181911363	181911582	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_181911400_181911600
Isoform_99399_16	chr1	-	225	1	Intergenic	novelGene_659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATCCCAAATACACTTGA	6340	False	NA	NA	False	NA	NA	NA	181930886	181930661	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_181930700_181930900
Isoform_99407_5	chr1	-	1058	1	NIC	ENSMUSG00000047539.10	novel	4925	5	NA	NA	4	-23313	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTTAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	182169179	182168121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_182168100_182169200
Isoform_99408_27	chr1	-	179	1	Intergenic	novelGene_660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGGGATTTGTACAAA	NA	False	NA	NA	False	NA	NA	NA	182186391	182186212	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_182186200_182186400
Isoform_99409_4	chr1	-	196	1	Intergenic	novelGene_661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAATCTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	182209226	182209030	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_182209000_182209200
Isoform_99411_25	chr1	-	176	1	Intergenic	novelGene_662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTCTATTTAC	NA	False	NA	NA	False	NA	NA	NA	182487387	182487211	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_182487200_182487400
Isoform_99412_3	chr1	-	175	1	Intergenic	novelGene_663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	182559721	182559546	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_182559500_182559700
Isoform_99413_18	chr1	-	175	1	Intergenic	novelGene_664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGAACTTACTAT	NA	False	NA	NA	False	NA	NA	NA	182805759	182805584	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_182805600_182805800
Isoform_99415_3	chr1	+	171	1	Intergenic	novelGene_665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAATTAGTAAT	NA	False	NA	NA	False	NA	NA	NA	183000210	183000381	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_183000200_183000400
Isoform_99416_41	chr1	+	207	1	Intergenic	novelGene_666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGCTTTACAGGTCTT	NA	False	NA	NA	False	AAAAAG	-11	NA	183034868	183035075	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_183034900_183035100
Isoform_99417_9	chr1	-	199	1	Intergenic	novelGene_667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGCTGAACACAGGATAG	3219	False	NA	NA	False	NA	NA	NA	183055420	183055221	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_183055200_183055400
Isoform_99419_5	chr1	+	1479	1	FSM	ENSMUSG00000042901.11	ENSMUST00000192252.2	1932	1	450	3	-9	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAAAATCAAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	183078583	183080062	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_183078600_183080100
Isoform_99420_4	chr1	+	177	1	Intergenic	novelGene_668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAACAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	183107309	183107486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_183107300_183107500
Isoform_99421_7	chr1	-	213	1	Intergenic	novelGene_669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGATAAAACC	NA	False	NA	NA	False	AATACA	-20	NA	183117785	183117572	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_183117600_183117800
Isoform_99422_72	chr1	+	190	1	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAATAAAATAGCTAATT	NA	False	NA	NA	False	NA	NA	NA	28380260	28380450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_28380300_28380400
Isoform_99426_7	chr1	-	176	1	Intergenic	novelGene_670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	183304215	183304039	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_183304000_183304200
Isoform_99427_19	chr1	+	176	1	Intergenic	novelGene_671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAACAAACAAAACCCCC	NA	False	NA	NA	False	NA	NA	NA	183820712	183820888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_183820700_183820900
Isoform_99428_54	chr1	+	203	1	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	28488031	28488234	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_28488000_28488200
Isoform_9943_159	chr10	-	176	1	Intergenic	novelGene_1050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	80441710	80441534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80441500_80441700
Isoform_99430_3	chr1	-	288	1	ISM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	10997	8	10997	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTGGAGGGCTGTG	8495	False	NA	-11	True	AATAAA	-20	NA	184604418	184604130	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_184604100_184604400
Isoform_99431_105	chr1	+	180	1	Intergenic	novelGene_672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	184618697	184618877	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_184618700_184618900
Isoform_99433_24	chr1	-	175	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATGCAGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	5141410	5141235	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_5141200_5141400
Isoform_99435_12	chr1	+	170	1	Intergenic	novelGene_673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAGAGAAGTATG	NA	False	NA	NA	False	NA	NA	NA	184801732	184801902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_184801700_184801900
Isoform_99436_3	chr1	-	4695	1	Intergenic	novelGene_674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	184964145	184959450	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_184959400_184964100
Isoform_99437_47	chr1	-	176	1	Intergenic	novelGene_675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	185031742	185031566	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_185031600_185031700
Isoform_99438_14	chr1	-	226	1	Intergenic	novelGene_676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAAAGTTTTCCAGGT	NA	False	NA	NA	False	NA	NA	NA	185060298	185060072	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_185060100_185060300
Isoform_99443_627	chr2	-	176	1	Intergenic	novelGene_6439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	627	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98848442	98848266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_-_98848300_98848400
Isoform_99444_4	chr1	+	179	1	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29942064	29942243	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_29942100_29942200
Isoform_99446_13	chr1	+	3504	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	-20	-272	-20	272	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGGTTTTTTGTTTT	NA	False	NA	6	True	NA	NA	NA	186699592	186703096	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_186699600_186703100
Isoform_99448_31	chr1	+	3460	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	25	-273	25	273	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTATGGTTTTTTGTTTTG	NA	False	NA	7	True	NA	NA	NA	186699637	186703097	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_186699600_186703100
Isoform_99449_195	chr1	+	3223	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	264	-275	264	275	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGTTTTTTGTTTTGTT	NA	False	NA	9	True	NA	NA	NA	186699876	186703099	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_186699900_186703100
Isoform_9945_8	chr10	-	171	1	Intergenic	novelGene_1051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	80462943	80462772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80462800_80462900
Isoform_99455_7	chr1	-	177	1	Intergenic	novelGene_678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	186948923	186948746	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_186948700_186948900
Isoform_99461_231	chr13	-	177	1	Intergenic	novelGene_2985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5573	False	NA	NA	False	NA	NA	NA	38032404	38032227	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr13_-_38032200_38032400
Isoform_99462_3	chr1	+	200	1	Intergenic	novelGene_679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAACCAACCAAAGGGGGA	NA	False	NA	NA	False	NA	NA	NA	188722577	188722777	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_188722600_188722800
Isoform_99463_4	chr1	+	224	1	Antisense	novelGene_ENSMUSG00000026608.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGTTCCCAGCACCCAAA	2711	False	NA	NA	False	NA	NA	NA	188729722	188729946	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_188729700_188729900
Isoform_99464_20	chr1	+	177	1	Intergenic	novelGene_680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	188954921	188955098	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_188954900_188955100
Isoform_99465_161	chr1	-	521	1	FSM	ENSMUSG00000102824.2	ENSMUST00000191699.2	381	1	-21	-119	-21	119	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATAGT	NA	False	NA	NA	False	AATAAA	-18	NA	189010041	189009520	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_189009500_189010000
Isoform_99469_225	chr1	-	187	1	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	47294	0	8064	0	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAACAGGCTTTGATCC	NA	False	NA	NA	False	NA	NA	NA	189372989	189372802	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr1_-_189372800_189373000
Isoform_99470_10	chr1	-	1011	1	FSM	ENSMUSG00000026605.15	ENSMUST00000194165.2	1027	1	5	11	5	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAATAATAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	189420278	189419267	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_189419300_189420300
Isoform_99471_4	chr1	+	168	1	Intergenic	novelGene_681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAACCACAAAGAC	NA	False	NA	NA	False	NA	NA	NA	189431842	189432010	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_189431800_189432000
Isoform_99472_3	chr1	+	2118	1	NIC	ENSMUSG00000026604.18	novel	10746	19	NA	NA	4817	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGTTGGATTGTAGT	NA	False	NA	3	True	AATAAA	-16	NA	189582056	189584174	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_189582100_189584200
Isoform_99475_14	chr1	+	164	1	Intergenic	novelGene_682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTTTAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	190525521	190525685	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_190525500_190525700
Isoform_99485_30	chr1	+	226	1	Intergenic	novelGene_684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATACATAGCAATTAAGT	NA	False	NA	NA	False	AATAAA	-7	NA	190756225	190756451	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_190756200_190756500
Isoform_99486_5	chr1	-	1264	1	FSM	ENSMUSG00000066595.10	ENSMUST00000191946.2	1216	1	-64	16	-30	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGACTTGGCAGTATTAC	NA	False	NA	NA	False	AATAAA	-12	NA	190758385	190757121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_190757100_190758400
Isoform_99490_6	chr1	+	2862	1	Intergenic	novelGene_685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAAAAGGAAAAAAG	3755	False	NA	NA	False	ACTAAA	-24	NA	190915624	190918486	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_190915600_190918500
Isoform_99493_9	chr1	+	186	1	Intergenic	novelGene_686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATTAAAATGTA	5616	False	NA	NA	False	NA	NA	NA	191042449	191042635	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_191042400_191042600
Isoform_99494_8	chr1	-	180	1	Intergenic	novelGene_687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAACCTTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	191066345	191066165	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_191066200_191066300
Isoform_99495_6	chr1	+	2496	1	Intergenic	novelGene_688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9392	False	NA	NA	False	NA	NA	NA	191107813	191110309	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_191107800_191110300
Isoform_99496_7	chr1	+	177	1	Intergenic	novelGene_689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATTCCTCA	NA	False	NA	NA	False	NA	NA	NA	191111682	191111859	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_191111700_191111900
Isoform_99497_17	chr1	+	1687	1	Intergenic	novelGene_690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3138	False	NA	NA	False	NA	NA	NA	191124201	191125888	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_191124200_191125900
Isoform_99499_6	chr1	-	174	1	Intergenic	novelGene_691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	1150	False	NA	NA	False	NA	NA	NA	191163666	191163492	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_191163500_191163700
Isoform_99500_6	chr1	+	178	1	Intergenic	novelGene_692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTTCCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	191165740	191165918	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_191165700_191165900
Isoform_99501_15	chr1	+	178	1	Intergenic	novelGene_693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATACTCTC	6193	False	NA	NA	False	NA	NA	NA	191231646	191231824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_191231600_191231800
Isoform_99502_4	chr1	+	3023	1	Antisense	novelGene_ENSMUSG00000037474.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2421	False	NA	NA	False	AATAAA	-9	NA	191269552	191272575	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_191269600_191272600
Isoform_99504_11	chr1	+	172	1	Intergenic	novelGene_694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATAAGGTT	3902	False	NA	NA	False	NA	NA	NA	191285401	191285573	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_191285400_191285600
Isoform_99505_3	chr1	-	2473	1	FSM	ENSMUSG00000048874.16	ENSMUST00000185604.2	824	1	-402	-1247	17	1247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCAAAAATAAAATGGA	NA	False	NA	NA	False	NA	NA	NA	30912958	30910485	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_30910500_30913000
Isoform_99506_14	chr1	+	207	1	Intergenic	novelGene_695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAAAGGCTCT	7381	False	NA	NA	False	NA	NA	NA	191298113	191298320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_191298100_191298300
Isoform_99508_20	chr1	-	1536	1	FSM	ENSMUSG00000037474.14	ENSMUST00000192014.2	4693	1	-30	3187	1	-3187	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAGAAATCCC	NA	False	NA	NA	False	NA	NA	NA	191307655	191306119	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191306100_191307700
Isoform_99510_6	chr1	-	1339	1	Antisense	novelGene_ENSMUSG00000037461.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	6366	False	NA	NA	False	NA	NA	NA	191356751	191355412	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_191355400_191356800
Isoform_99513_3	chr1	+	4711	2	NNC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	60986	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATTGGGTGGCCTTGTTC	3739	False	NA	5	True	AATAAA	-14	NA	191511618	191516363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr1_+_191513239_191513272
Isoform_99519_4	chr1	-	1576	1	FSM	ENSMUSG00000102840.2	ENSMUST00000192600.2	1624	1	45	3	45	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAGTATAAGCTAATT	NA	False	NA	NA	False	NA	NA	NA	191554060	191552484	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_191552500_191554100
Isoform_99529_4	chr1	+	175	1	Intergenic	novelGene_696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAGGAAATACA	NA	False	NA	NA	False	NA	NA	NA	191701351	191701526	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_191701400_191701500
Isoform_9953_3	chr10	+	175	1	Intergenic	novelGene_1052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	80523588	80523763	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80523600_80523800
Isoform_99530_4	chr1	-	178	1	Intergenic	novelGene_697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAGAAGAATA	NA	False	NA	NA	False	NA	NA	NA	191733540	191733362	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_191733400_191733500
Isoform_99538_7	chr1	-	176	1	Intergenic	novelGene_698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAAATTGCACACATGC	1994	False	NA	NA	False	NA	NA	NA	192097796	192097620	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_192097600_192097800
Isoform_99543_23	chr1	-	188	1	Intergenic	novelGene_699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTAAAGTACAATTTCT	NA	False	NA	NA	False	NA	NA	NA	192892575	192892387	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_192892400_192892600
Isoform_99546_41	chr1	+	166	1	Intergenic	novelGene_700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAATTAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	192936428	192936594	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_192936400_192936600
Isoform_99549_7	chr1	-	235	1	FSM	ENSMUSG00000065533.3	ENSMUST00000083599.3	68	1	65	-232	65	232	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTCTCTGCCCTAT	8217	False	NA	NA	False	ATTAAA	-24	NA	193189773	193189538	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_193189500_193189800
Isoform_9955_8	chr10	+	158	1	Intergenic	novelGene_730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	12318127	12318285	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_12318100_12318300
Isoform_99550_3	chr5	-	177	1	Intergenic	novelGene_8381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTTTTAGCTTG	NA	False	NA	NA	False	NA	NA	NA	24997203	24997026	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_24997000_24997200
Isoform_99551_1003	chr1	-	180	1	Intergenic	novelGene_701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1003	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	194366962	194366782	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_194366800_194367000
Isoform_99554_203	chr1	+	168	1	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	33029837	33030005	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_33029800_33030000
Isoform_99555_3	chr1	+	3655	1	Antisense	novelGene_ENSMUSG00000026134.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33656844	33660499	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_33656800_33660500
Isoform_99557_29	chr1	+	176	1	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGGGACCTCATA	5824	False	NA	NA	False	NA	NA	NA	33744765	33744941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_33744800_33744900
Isoform_99558_131	chr2	+	176	1	Intergenic	novelGene_6092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30279876	30280052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr2_+_30279900_30280100
Isoform_99559_9	chr1	-	169	1	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTAAG	167	False	NA	NA	False	NA	NA	NA	33757801	33757632	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_33757600_33757800
Isoform_99560_6	chr1	+	975	1	NIC	ENSMUSG00000004768.15	novel	444	3	NA	NA	1	-2967	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCCAAATAAC	NA	False	NA	NA	False	TTTAAA	-27	NA	33758976	33759951	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_33759000_33760000
Isoform_99561_30	chr1	+	180	1	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGAG	NA	False	NA	NA	False	NA	NA	NA	33761856	33762036	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_33761900_33762000
Isoform_99562_3	chr1	-	1233	1	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-20	NA	5210839	5209606	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_5209600_5210800
Isoform_99564_13	chr1	-	171	1	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	33821762	33821591	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_33821600_33821800
Isoform_99566_114	chr1	+	176	1	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGAATTCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33888549	33888725	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_33888500_33888700
Isoform_99567_6	chr1	-	157	1	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	33924586	33924429	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_33924400_33924600
Isoform_99570_43	chr1	-	178	1	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4857	False	NA	NA	False	NA	NA	NA	34069004	34068826	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_34068800_34069000
Isoform_99571_17	chr1	+	180	1	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTAGATGGGGTCC	6700	False	NA	NA	False	NA	NA	NA	34131324	34131504	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_34131300_34131500
Isoform_99572_10	chr1	+	192	1	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATGATGCCAAAATTTG	NA	False	NA	NA	False	NA	NA	NA	34135477	34135669	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_34135500_34135700
Isoform_99573_5	chr1	-	1420	1	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4338	False	NA	NA	False	AATAAA	-13	NA	34140238	34138818	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_34138800_34140200
Isoform_99575_4	chr1	+	176	1	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAATCCTTACAAAT	NA	False	NA	NA	False	NA	NA	NA	5282607	5282783	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_5282600_5282800
Isoform_99577_5	chr1	-	154	1	FSM	ENSMUSG00000096992.4	ENSMUST00000187268.2	3416	1	3252	10	3077	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	34214275	34214121	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_34214100_34214300
Isoform_99578_5	chr1	+	160	1	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	34286064	34286224	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_34286100_34286200
Isoform_99579_12	chr1	-	179	1	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	34398704	34398525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_34398500_34398700
Isoform_9958_17	chr10	+	177	1	Intergenic	novelGene_1054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	80578950	80579127	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80579000_80579100
Isoform_99580_10	chr1	+	175	1	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATGAAATTTGCA	NA	False	NA	NA	False	NA	NA	NA	5602125	5602300	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_5602100_5602300
Isoform_99587_10	chr1	+	291	1	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34835608	34835899	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_34835600_34835900
Isoform_9959_16	chr10	-	204	1	Intergenic	novelGene_1055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTAGTCCC	7777	False	NA	NA	False	NA	NA	NA	80579529	80579325	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80579300_80579500
Isoform_9960_3	chr10	-	157	1	Intergenic	novelGene_1056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATTAAAAAA	764	False	NA	NA	False	NA	NA	NA	80589546	80589389	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80589400_80589500
Isoform_9961_8	chr10	+	177	1	Intergenic	novelGene_1057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAGA	76	False	NA	NA	False	NA	NA	NA	80602984	80603161	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80603000_80603200
Isoform_99614_21	chr1	-	177	1	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	34943292	34943115	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_34943100_34943300
Isoform_99615_40	chr1	+	179	1	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGCTGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34985330	34985509	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_34985300_34985500
Isoform_99617_8	chr1	+	173	1	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	6156716	6156889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_6156700_6156900
Isoform_99618_140	chr1	+	177	1	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	36019591	36019768	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36019600_36019800
Isoform_9962_27	chr10	-	177	1	Intergenic	novelGene_1058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	80625904	80625727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80625700_80625900
Isoform_99620_6	chr1	-	281	1	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCTGCTTGAGTTCCA	NA	False	NA	NA	False	NA	NA	NA	36028056	36027775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_36027800_36028100
Isoform_99621_71	chr11	-	207	1	Intergenic	novelGene_1886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACAAGGGGCTGGTGAG	NA	False	NA	NA	False	NA	NA	NA	80357473	80357266	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr11_-_80357300_80357500
Isoform_99622_4	chr1	-	183	1	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	36030585	36030402	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_36030400_36030600
Isoform_99623_516	chr1	+	216	1	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAACAAAGC	NA	False	NA	NA	False	AAAAAG	-14	NA	36090765	36090981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36090800_36091000
Isoform_99642_8	chr17	+	181	1	Intergenic	novelGene_4679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATAGA	706	False	NA	NA	False	NA	NA	NA	8507050	8507231	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr17_+_8507000_8507200
Isoform_99646_4	chr1	-	4696	1	FSM	ENSMUSG00000090031.3	ENSMUST00000191825.2	5428	1	732	0	29	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCTGAAATCATTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	6284785	6280089	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_6280100_6284800
Isoform_99648_3	chr1	+	185	1	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	36224214	36224399	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36224200_36224400
Isoform_99649_5	chr1	+	173	1	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	36245968	36246141	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36246000_36246100
Isoform_99650_14	chr1	+	173	1	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	4861	False	NA	NA	False	NA	NA	NA	36313135	36313308	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36313100_36313300
Isoform_99651_25	chr1	+	176	1	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	36344698	36344874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36344700_36344900
Isoform_99653_11	chr1	+	1666	1	FSM	ENSMUSG00000102762.2	ENSMUST00000192234.2	713	1	-776	-177	-776	177	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-10	NA	36371012	36372678	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_36371000_36372700
Isoform_99654_5	chr1	+	4616	1	Antisense	novelGene_ENSMUSG00000010453.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTATCTCAAGAAAAAAACA	9683	False	NA	NA	False	NA	NA	NA	36394175	36398791	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_36394200_36398800
Isoform_99656_3	chr1	-	3076	1	Genic_Genomic	ENSMUSG00000001143.14	novel	NA	NA	NA	NA	6487	1067	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAACCACCTGACCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	36460960	36457884	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_-_36457900_36461000
Isoform_99657_7	chr1	-	1514	1	FSM	ENSMUSG00000001143.14	ENSMUST00000193502.2	1513	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAGAAAAACATT	NA	False	NA	NA	False	NA	NA	NA	36484338	36482824	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_-_36482800_36484300
Isoform_99659_4	chr1	+	3926	1	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	32	-3750	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCGCACA	NA	False	NA	NA	False	NA	NA	NA	36550979	36554905	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_36551000_36554900
Isoform_99661_4	chr1	+	3086	1	Antisense	novelGene_ENSMUSG00000067653.13_AS_novelGene_ENSMUSG00000109510.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36572912	36575998	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_36572900_36576000
Isoform_99663_67	chr1	+	172	1	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATCTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36583555	36583727	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36583600_36583700
Isoform_99666_17	chr1	+	2491	1	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAACAAAAAAAAAA	1746	False	NA	NA	False	NA	NA	NA	36693308	36695799	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36693300_36695800
Isoform_99667_4	chr1	-	177	1	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAATGAACAA	7992	False	NA	NA	False	NA	NA	NA	36701949	36701772	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_36701800_36701900
Isoform_99669_8	chr1	+	247	1	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATTAAAAAAAAATGC	4903	False	NA	73	True	NA	NA	NA	36707311	36707558	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36707300_36707600
Isoform_99671_40	chr1	+	205	1	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTGGTAGGAAGAAAACT	3773	False	NA	NA	False	NA	NA	NA	36775115	36775320	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36775100_36775300
Isoform_99672_25	chr1	+	165	1	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	36830368	36830533	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_36830400_36830500
Isoform_99681_5	chr1	-	178	1	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	37073873	37073695	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_37073700_37073900
Isoform_99682_21	chr1	-	177	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATGTGGATTCTGGG	NA	False	NA	NA	False	NA	NA	NA	6417521	6417344	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_6417300_6417500
Isoform_99684_28	chr1	-	176	1	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAGAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	37250737	37250561	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_37250600_37250700
Isoform_99685_9	chr1	+	176	1	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37275441	37275617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_37275400_37275600
Isoform_99686_10	chr5	-	174	1	Intergenic	novelGene_8586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATATTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80851216	80851042	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr5_-_80851000_80851200
Isoform_99696_7	chr1	+	3876	1	Antisense	novelGene_ENSMUSG00000026110.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4525	False	NA	NA	False	AATAAA	-18	NA	37499125	37503001	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_37499100_37503000
Isoform_99698_8	chr1	-	233	1	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACCCCCATAGACTCA	NA	False	NA	NA	False	TTTAAA	-18	NA	37523781	37523548	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_37523500_37523800
Isoform_99700_6	chr1	-	2141	1	NIC	ENSMUSG00000026088.16	novel	1175	8	NA	NA	8	-6330	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	37929480	37927339	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_-_37927300_37929500
Isoform_99702_22	chr1	+	173	1	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	37943808	37943981	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_37943800_37944000
Isoform_99704_3	chr1	+	202	1	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAG	8564	False	NA	NA	False	NA	NA	NA	38007339	38007541	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_38007300_38007500
Isoform_99705_23	chr1	-	193	1	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCAGGGCAGTGGTG	7321	False	NA	NA	False	NA	NA	NA	38053267	38053074	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_38053100_38053300
Isoform_99707_39	chr1	-	182	1	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGACACTCAATGT	NA	False	NA	NA	False	NA	NA	NA	38062078	38061896	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_38061900_38062100
Isoform_99708_3	chr1	-	4515	1	Antisense	novelGene_ENSMUSG00000026083.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACATAAAACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	38082622	38078107	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_38078100_38082600
Isoform_99710_106	chr1	+	172	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAATAGATATTC	NA	False	NA	NA	False	NA	NA	NA	7067207	7067379	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_7067200_7067400
Isoform_99711_74	chr1	+	3165	1	Antisense	novelGene_ENSMUSG00000026082.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38096505	38099670	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_38096500_38099700
Isoform_99712_4	chr1	+	174	1	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATACTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	38104285	38104459	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_38104300_38104500
Isoform_99716_4	chr1	+	210	1	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGCTGAGCTATGGGAA	NA	False	NA	NA	False	NA	NA	NA	38974907	38975117	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_38974900_38975100
Isoform_99718_11	chr1	+	293	1	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTATTGGAA	8019	False	NA	NA	False	NA	NA	NA	39360463	39360756	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_39360500_39360800
Isoform_99720_16	chr1	+	154	1	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	39468567	39468721	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_39468600_39468700
Isoform_99721_38	chr1	+	174	1	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAGTAATCT	5335	False	NA	NA	False	NA	NA	NA	39498686	39498860	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_39498700_39498900
Isoform_99726_97	chr1	-	171	1	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	39787266	39787095	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_39787100_39787300
Isoform_99728_83	chr1	+	166	1	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	4063	False	NA	NA	False	NA	NA	NA	40014117	40014283	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_40014100_40014300
Isoform_99729_4	chr1	+	944	1	Genic_Genomic	ENSMUSG00000026074.16	novel	NA	NA	NA	NA	2162	5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTCATCACTACATTC	5182	False	NA	NA	False	AATAAA	-28	NA	40064531	40065475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Genic_Genomic_chr1_+_40064500_40065500
Isoform_99730_6	chr1	+	1246	1	NIC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	23	-70704	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAGAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	7159176	7160422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_7159200_7160400
Isoform_99732_6	chr1	+	1210	1	NIC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	59	-70704	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAGAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	7159212	7160422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr1_+_7159200_7160400
Isoform_99734_43	chr1	+	188	1	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	42552576	42552764	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_42552600_42552800
Isoform_99735_4	chr1	-	173	1	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAACGATGCAGCA	NA	False	NA	NA	False	NA	NA	NA	42756274	42756101	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_42756100_42756300
Isoform_99736_14	chr1	+	171	1	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATAAATCTCTAAA	NA	False	NA	NA	False	NA	NA	NA	42828415	42828586	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_42828400_42828600
Isoform_99742_32	chr1	+	211	1	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	43160577	43160788	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_43160600_43160800
Isoform_99744_1467	chr1	+	653	1	FSM	ENSMUSG00000094497.2	ENSMUST00000178557.2	483	1	-51	-119	-51	119	mono-exon	FALSE	NA	NA	NA	NA	NA	1467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	43228264	43228917	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr1_+_43228300_43228900
Isoform_99746_15	chr1	-	4233	1	Antisense	novelGene_ENSMUSG00000103945.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43604769	43600536	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_43600500_43604800
Isoform_99747_6	chr1	+	176	1	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	43600865	43601041	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_43600900_43601000
Isoform_99748_9	chr1	+	182	1	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATTTATTAAAAAAAAAGA	5875	False	NA	NA	False	NA	NA	NA	43736718	43736900	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_43736700_43736900
Isoform_99749_3	chr1	+	1160	1	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATCTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43862805	43863965	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_43862800_43864000
Isoform_9975_8	chr10	-	196	1	Intergenic	novelGene_1059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGCT	5469	False	NA	NA	False	NA	NA	NA	80696492	80696296	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80696300_80696500
Isoform_99750_17	chr1	-	183	1	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTGCAG	NA	False	NA	NA	False	NA	NA	NA	43881133	43880950	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_43881000_43881100
Isoform_99751_4	chr1	-	176	1	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATGTAT	NA	False	NA	NA	False	NA	NA	NA	7188117	7187941	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_7187900_7188100
Isoform_99752_78	chr8	-	177	1	Intergenic	novelGene_10686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAGAAGAGA	7902	False	NA	NA	False	NA	NA	NA	70131328	70131151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr8_-_70131200_70131300
Isoform_99753_3	chr1	-	981	1	Antisense	novelGene_ENSMUSG00000041763.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGCTATTTCTATCTC	6900	False	NA	NA	False	NA	NA	NA	44013034	44012053	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_-_44012100_44013000
Isoform_99755_19	chr1	+	203	1	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTGTATCTAATTTT	NA	False	NA	NA	False	NA	NA	NA	44093471	44093674	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_44093500_44093700
Isoform_99757_16	chr1	+	246	1	Antisense	novelGene_ENSMUSG00000026049.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44140905	44141151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr1_+_44140900_44141200
Isoform_99759_3	chr1	+	169	1	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	44355430	44355599	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_44355400_44355600
Isoform_9976_3	chr10	+	2764	1	Antisense	novelGene_ENSMUSG00000019820.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12331157	12333921	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_12331200_12333900
Isoform_99760_10	chr1	-	160	1	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTTTTAAAATTTTGA	NA	False	NA	NA	False	NA	NA	NA	44462749	44462589	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_44462600_44462700
Isoform_99762_8	chr1	-	495	1	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGGGTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	44865299	44864804	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_44864800_44865300
Isoform_99763_13	chr1	+	178	1	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	45470556	45470734	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_45470600_45470700
Isoform_99768_7	chr1	-	158	1	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATTATTCTT	NA	False	NA	NA	False	NA	NA	NA	45564831	45564673	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_45564700_45564800
Isoform_99770_5	chr15	-	6995	2	Intergenic	novelGene_3771	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	9226273	9219242	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr15_-_9220288_9220323
Isoform_99772_57	chr1	-	177	1	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATACAT	NA	False	NA	NA	False	NA	NA	NA	45708324	45708147	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_45708100_45708300
Isoform_99782_43	chr10	+	168	1	Intergenic	novelGene_708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4172607	4172775	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_4172600_4172800
Isoform_99783_33	chr1	-	172	1	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAACTATCA	NA	False	NA	NA	False	NA	NA	NA	47065402	47065230	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_47065200_47065400
Isoform_99784_9	chr1	+	167	1	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAATCTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47525984	47526151	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_47526000_47526200
Isoform_99785_38	chr1	-	176	1	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47813447	47813271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_47813300_47813400
Isoform_99786_5	chr1	-	3820	1	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	48780832	48777012	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_48777000_48780800
Isoform_99787_3	chr1	-	176	1	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49081598	49081422	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_49081400_49081600
Isoform_99788_17	chr1	+	178	1	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGAAGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	49146172	49146350	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_49146200_49146400
Isoform_99789_10	chr1	-	201	1	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGAGTAGGTCTGGC	NA	False	NA	NA	False	NA	NA	NA	49955103	49954902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_-_49954900_49955100
Isoform_99790_6	chr1	+	223	1	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAAAAAAAAGGAC	NA	False	NA	NA	False	AATAAA	-10	NA	51560387	51560610	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr1_+_51560400_51560600
Isoform_99791_202	chr2	-	1027	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	15	0	15	0	multi-exon	FALSE	canonical	3	304	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGGATCCTGCATGGA	2332	False	NA	-15	True	AATAAA	-18	NA	3333665	3329985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3330911_3333563
Isoform_99797_3	chr2	-	3199	2	NNC	ENSMUSG00000049950.7	novel	1042	2	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTAGGATCCTGCATG	2326	False	NA	-17	True	AATAAA	-16	NA	3333671	3329987	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_3330911_3331395
Isoform_99798_3	chr2	-	3135	2	NNC	ENSMUSG00000049950.7	novel	1042	2	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGGATCCTGCATGGA	2392	False	NA	-15	True	AATAAA	-18	NA	3333605	3329985	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_3330911_3331395
Isoform_9980_5	chr10	+	5512	1	Antisense	novelGene_ENSMUSG00000062075.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTAGCAAGCAGTCT	NA	False	NA	NA	False	NA	NA	NA	80743855	80749367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Antisense_chr10_+_80743900_80749400
Isoform_99801_45	chr2	-	2593	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-31	1765	-31	0	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTCTGGGAGTT	NA	False	NA	-10	True	AATAAA	-18	NA	3476099	3458616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
Isoform_99802_68	chr2	-	2551	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	10	1766	10	0	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGGGTCTGGGAGT	NA	False	NA	-11	True	AATAAA	-17	NA	3476058	3458617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
Isoform_99804_21	chr2	-	4310	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	13	4	13	-4	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTCCTGTTGTTCTGT	NA	False	NA	-6	True	AATAAA	-12	NA	3476055	3456855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
Isoform_99817_11	chr2	-	4113	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	2	-1784	2	-4	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTCCTGTTGTTCTGT	NA	False	NA	-6	True	AATAAA	-12	NA	3476004	3456855	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
Isoform_99818_36	chr2	-	2447	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-93	-23	-31	0	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTCTGGGAGTT	NA	False	NA	-10	True	AATAAA	-18	NA	3476099	3458616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
Isoform_99819_9	chr2	-	2379	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-119	71	-57	-71	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTATGTCTGATTGAATT	NA	False	NA	-4	True	GATAAA	-15	NA	3476125	3458710	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
Isoform_9982_18	chr10	+	180	1	Intergenic	novelGene_1060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCAGAATTTCA	NA	False	NA	NA	False	NA	NA	NA	80778224	80778404	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80778200_80778400
Isoform_99824_55	chr2	-	2352	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	2	-23	2	0	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTCTGGGAGTT	NA	False	NA	-10	True	AATAAA	-18	NA	3476004	3458616	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
Isoform_9983_6	chr10	-	205	1	Intergenic	novelGene_1061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGGAAAAGGAAACTA	8745	False	NA	NA	False	NA	NA	NA	80790131	80789926	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80789900_80790100
Isoform_99831_5	chr2	-	1193	3	ISM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-33	8427	-33	-6639	5prime_fragment	FALSE	canonical	3	149	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTTGTACTTTCTAAC	NA	False	NA	-1	True	ATTAAA	-16	NA	3476101	3465278	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_3465964_3473538_3473685_3475739
Isoform_9984_149	chr10	+	177	1	Intergenic	novelGene_1062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	80825913	80826090	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_80825900_80826100
Isoform_99841_1878	chr2	-	1753	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	39	3	-32	-3	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	1878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGGAGTCTTTGTTTT	3981	False	NA	-8	True	ATTAAA	-17	NA	3513812	3489889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
Isoform_99842_258	chr2	-	1782	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	10	3	10	-3	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGGAGTCTTTGTTTT	3952	False	NA	-8	True	ATTAAA	-17	NA	3513841	3489889	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
Isoform_9985_7	chr10	-	189	1	Intergenic	novelGene_1063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTCCCAC	1306	False	NA	NA	False	NA	NA	NA	80853897	80853708	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80853700_80853900
Isoform_99864_77	chr2	-	3535	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-19	6	1	-6	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATACAGGTGCTGCTT	NA	False	NA	92	True	AGTAAA	-17	NA	4656916	4626874	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
Isoform_99865_123	chr2	-	3437	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-20	105	0	-105	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTATTGACTGTGTCC	NA	False	NA	-7	True	TTTAAA	-29	NA	4656917	4626973	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
Isoform_99868_4	chr2	-	1600	10	FSM	ENSMUSG00000039449.15	ENSMUST00000152362.7	1579	10	-21	0	-21	0	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATGGGTCATTGAAT	NA	False	NA	NA	False	NA	NA	NA	4656945	4628838	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
Isoform_9987_10	chr10	-	174	1	Intergenic	novelGene_1064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTACGAAAA	9861	False	NA	NA	False	NA	NA	NA	80896571	80896397	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_-_80896400_80896600
Isoform_9989_137	chr9	+	178	1	Intergenic	novelGene_11290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56358584	56358762	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr9_+_56358600_56358800
Isoform_99893_24	chr2	-	4218	20	FSM	ENSMUSG00000026669.15	ENSMUST00000102985.8	4867	20	-362	1011	9	-1	multi-exon	FALSE	canonical	2	42	junction_19	167.610417568725	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017517	4995535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5016705
Isoform_99894_1480	chr2	-	3430	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	63	1	-13	-1	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017539	4995535	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
Isoform_99895_53	chr2	-	4452	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	51	-1009	13	-1	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATGTTTATCTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	5017551	4994525	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
Isoform_99898_24	chr2	-	3537	21	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_18	222.579671129239	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017533	4995534	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5013951_5014064_5015499_5015587_5017515
Isoform_9991_3	chr10	+	667	1	NIC	ENSMUSG00000035011.16	novel	5938	3	NA	NA	1	-6874	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCTTTGCAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-10	NA	80972400	80973067	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr10_+_80972400_80973100
Isoform_99915_17	chr2	-	2558	15	FSM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	-147	0	-34	0	multi-exon	FALSE	canonical	3	32	junction_1	40.4028817925511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTTATCTGATTTA	NA	False	NA	-2	True	AGTAAA	-15	NA	5068896	5025454	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
Isoform_99916_17	chr2	-	2535	15	FSM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	-122	-2	-9	0	multi-exon	FALSE	canonical	3	32	junction_1	40.4028817925511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068871	5025452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
Isoform_9992_3	chr10	+	3245	1	ISM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	12705	2	11023	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTTTGCCTGGTCTCT	NA	False	NA	20	True	CATAAA	-36	NA	80984809	80988054	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr10_+_80984800_80988100
Isoform_99921_17	chr2	-	2018	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-62	658	-56	1	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTACTTCTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	5068918	5026110	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
Isoform_99922_109	chr2	-	2634	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-20	0	-14	0	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068876	5025452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
Isoform_99923_5	chr2	-	4225	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-61	-1550	-55	1550	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGACTTCTTTTACTCTG	NA	False	NA	-20	True	NA	NA	NA	5068917	5023902	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
Isoform_99924_5	chr2	-	2251	12	NIC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-11	0	intron_retention	FALSE	canonical	2	9	junction_11	42.3488073929279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068873	5025452	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5068717
Isoform_99926_3	chr2	-	1438	7	ISM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-20	15652	-14	9863	5prime_fragment	FALSE	canonical	3	74	junction_6	40.7635458058627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	5068876	5041104	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
Isoform_99931_22	chr2	-	6677	11	FSM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	42	-5424	42	-6	multi-exon	FALSE	canonical	3	40	junction_3	6.22976725086901	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTGGGTTGTCTGT	1219	False	NA	-5	True	AATAAA	-15	NA	5680815	5298273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
Isoform_99934_5	chr2	-	6948	11	FSM	ENSMUSG00000039145.17	ENSMUST00000044009.14	6962	11	8	6	-4	-6	multi-exon	FALSE	canonical	3	18	junction_10	11.2977873939989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTGGGTTGTCTGT	NA	False	NA	-5	True	AATAAA	-15	NA	5719318	5298273	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5718956
Isoform_99935_5	chr2	-	3222	11	NNC	ENSMUSG00000039145.17	novel	1295	11	NA	NA	42	1965	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	13.8740765458462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTCTTCTAAGAGTCA	1219	False	NA	NA	False	AATAAA	-10	NA	5680815	5301732	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_5303913_5306302_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
Isoform_99936_4	chr2	-	6700	11	NNC	ENSMUSG00000039145.17	novel	1295	11	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	13.8740765458462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGGGTTGTCTGTTT	1202	False	NA	-3	True	AATAAA	-17	NA	5680832	5298271	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NNC_chr2_-_5303913_5306302_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
Isoform_99937_5	chr2	-	3009	2	ISM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	40	263978	40	2621	5prime_fragment	FALSE	canonical	3	45	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGAGG	1217	False	NA	NA	False	NA	NA	NA	5680817	5567675	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_5570592_5680724
Isoform_99940_1053	chr2	-	1247	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	204	376	-19	-5	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGGAAGCCTACTGT	NA	False	NA	-12	True	AATAAA	-10	NA	5849771	5799480	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
Isoform_99944_101	chr2	-	1218	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	91	junction_9	296.801433468727	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849770	5799475	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
Isoform_9995_15	chr10	+	205	1	Intergenic	novelGene_1065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCCTTTCAGAATGG	6129	False	NA	NA	False	NA	NA	NA	81006847	81007052	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	Intergenic_chr10_+_81006800_81007100
Isoform_99951_44	chr2	-	1003	8	NIC	ENSMUSG00000039128.14	novel	600	7	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	373.173538445478	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTCATCATTGCTTTT	NA	False	NA	0	True	AATACA	-16	NA	5849771	5814367	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
Isoform_99958_313	chr2	-	2399	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	53	-4	-45	4	multi-exon	FALSE	canonical	3	221	junction_3	37.3630833845388	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCTCTAAGAGTATTT	NA	False	NA	-13	True	AATAAA	-14	NA	5900190	5875793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
Isoform_99961_7	chr2	-	2193	11	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-31	4	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	84.6070919013294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCTCTAAGAGTATTT	NA	False	NA	-13	True	AATAAA	-14	NA	5900176	5875793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_5876833_5878553_5878631_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
Isoform_99962_7	chr2	-	2160	11	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	2	4	combination_of_known_junctions	TRUE	canonical	3	23	junction_2	84.6070919013294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCTCTAAGAGTATTT	NA	False	NA	-13	True	AATAAA	-14	NA	5900143	5875793	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_5876833_5878553_5878631_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
Isoform_99963_23	chr2	-	1367	6	ISM	ENSMUSG00000025816.16	ENSMUST00000026926.5	756	8	-75	3952	38	1	5prime_fragment	FALSE	canonical	3	245	junction_1	28.7193314685422	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	5900205	5886617	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
Isoform_99964_14	chr2	-	3429	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	-6	2057	-6	-994	multi-exon	FALSE	canonical	3	33	junction_14	8.78119439484174	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGATTGTATGGTCG	NA	False	NA	NA	False	AGTAAA	-15	NA	5947609	5902982	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
Isoform_99966_9	chr2	-	2283	4	ISM	ENSMUSG00000045319.14	ENSMUST00000126551.2	945	5	20	-1146	20	-19	intron_retention	FALSE	canonical	0	0	junction_3	16.2685791225499	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6134930	6104854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134438
Isoform_99967_4	chr2	-	2258	4	ISM	ENSMUSG00000045319.14	ENSMUST00000126551.2	945	5	68	-1169	68	4	intron_retention	FALSE	canonical	0	0	junction_3	16.2685791225499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCTTGTTAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	6134882	6104831	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	ISM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134438
Isoform_99968_13	chr2	-	2107	5	FSM	ENSMUSG00000045319.14	ENSMUST00000126551.2	945	5	-16	-1146	-9	-19	multi-exon	FALSE	canonical	0	0	junction_3	17.007351351695	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6134966	6104854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134438_6134641_6134852
Isoform_99969_19	chr2	-	2028	4	FSM	ENSMUSG00000045319.14	ENSMUST00000054254.12	2061	4	14	19	7	-19	multi-exon	FALSE	canonical	1	2	junction_3	15.3260852434302	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6134943	6104854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134706
Isoform_99971_3	chr2	-	2113	4	FSM	ENSMUSG00000045319.14	ENSMUST00000054254.12	2061	4	-71	19	-6	-19	multi-exon	FALSE	canonical	1	2	junction_3	15.3260852434302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6135028	6104854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134706
Isoform_99972_31	chr2	-	1956	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	5	2437	5	-19	multi-exon	FALSE	canonical	3	22	junction_3	5.90668171555645	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6135017	6104854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
Isoform_99973_69	chr2	-	1909	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	52	2437	-13	-19	multi-exon	FALSE	canonical	3	22	junction_3	5.90668171555645	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6134970	6104854	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
Isoform_99974_5	chr2	-	3452	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	52	894	-13	-894	multi-exon	FALSE	canonical	3	22	junction_3	5.90668171555645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGGACCCTGCTGTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	6134970	6103311	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
Isoform_99975_4	chr2	-	1461	5	FSM	ENSMUSG00000039063.6	ENSMUST00000042658.5	1851	5	36	354	-18	-354	multi-exon	TRUE	canonical	0	0	junction_1	2.1650635094611	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGGTCATTTCATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	6217808	6193629	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_6194463_6200393_6200595_6211225_6211324_6213278_6213401_6217601
Isoform_99976_4	chr2	-	2596	14	NIC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	97	64	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	7.26912901841689	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCCAGACTAAGTTTTG	7950	False	NA	NA	False	NA	NA	NA	6877311	6549553	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
Isoform_99977_102	chr2	-	4788	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	3	1	3	-1	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTTTCCATTTTCT	NA	False	NA	-1	True	AATAAA	-19	NA	10053404	9919363	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
Isoform_99980_5	chr2	-	4434	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-21	379	-21	360	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGATTTTTTTTTTA	NA	False	NA	NA	False	AATATA	-7	NA	10053428	9919741	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
Isoform_99999_4713	chr2	-	1084	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	78	4	-5	-4	multi-exon	FALSE	canonical	3	3857	junction_2	289.314942238504	4713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9582	False	NA	-6	True	AATAAA	-15	NA	10085243	10060844	ES_FreeStyle	iso_detect_ref_Mandalorion_FreeStyle	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
